Gene stable ID	Gene type	Gene name	Transcript stable ID	Transcript type	APPRIS annotation	Chromosome/scaffold name	Strand	Transcription start site (TSS)	Transcript length (including UTRs and CDS)
ENSMUSG00000064336	Mt_tRNA	mt-Tf	ENSMUST00000082387	Mt_tRNA		MT	1	1	68
ENSMUSG00000064337	Mt_rRNA	mt-Rnr1	ENSMUST00000082388	Mt_rRNA		MT	1	70	955
ENSMUSG00000064338	Mt_tRNA	mt-Tv	ENSMUST00000082389	Mt_tRNA		MT	1	1025	69
ENSMUSG00000064339	Mt_rRNA	mt-Rnr2	ENSMUST00000082390	Mt_rRNA		MT	1	1094	1582
ENSMUSG00000064340	Mt_tRNA	mt-Tl1	ENSMUST00000082391	Mt_tRNA		MT	1	2676	75
ENSMUSG00000064341	protein_coding	mt-Nd1	ENSMUST00000082392	protein_coding	principal1	MT	1	2751	957
ENSMUSG00000064342	Mt_tRNA	mt-Ti	ENSMUST00000082393	Mt_tRNA		MT	1	3706	69
ENSMUSG00000064343	Mt_tRNA	mt-Tq	ENSMUST00000082394	Mt_tRNA		MT	-1	3842	71
ENSMUSG00000064344	Mt_tRNA	mt-Tm	ENSMUST00000082395	Mt_tRNA		MT	1	3845	69
ENSMUSG00000064345	protein_coding	mt-Nd2	ENSMUST00000082396	protein_coding	principal1	MT	1	3914	1038
ENSMUSG00000064346	Mt_tRNA	mt-Tw	ENSMUST00000082397	Mt_tRNA		MT	1	4950	67
ENSMUSG00000064347	Mt_tRNA	mt-Ta	ENSMUST00000082398	Mt_tRNA		MT	-1	5086	69
ENSMUSG00000064348	Mt_tRNA	mt-Tn	ENSMUST00000082399	Mt_tRNA		MT	-1	5159	71
ENSMUSG00000064349	Mt_tRNA	mt-Tc	ENSMUST00000082400	Mt_tRNA		MT	-1	5257	66
ENSMUSG00000064350	Mt_tRNA	mt-Ty	ENSMUST00000082401	Mt_tRNA		MT	-1	5326	67
ENSMUSG00000064351	protein_coding	mt-Co1	ENSMUST00000082402	protein_coding	principal1	MT	1	5328	1545
ENSMUSG00000064352	Mt_tRNA	mt-Ts1	ENSMUST00000082403	Mt_tRNA		MT	-1	6938	69
ENSMUSG00000064353	Mt_tRNA	mt-Td	ENSMUST00000082404	Mt_tRNA		MT	1	6942	70
ENSMUSG00000064354	protein_coding	mt-Co2	ENSMUST00000082405	protein_coding	principal1	MT	1	7013	684
ENSMUSG00000064355	Mt_tRNA	mt-Tk	ENSMUST00000082406	Mt_tRNA		MT	1	7700	65
ENSMUSG00000064356	protein_coding	mt-Atp8	ENSMUST00000082407	protein_coding	principal1	MT	1	7766	204
ENSMUSG00000064357	protein_coding	mt-Atp6	ENSMUST00000082408	protein_coding	principal1	MT	1	7927	681
ENSMUSG00000064358	protein_coding	mt-Co3	ENSMUST00000082409	protein_coding	principal1	MT	1	8607	784
ENSMUSG00000064359	Mt_tRNA	mt-Tg	ENSMUST00000082410	Mt_tRNA		MT	1	9391	68
ENSMUSG00000064360	protein_coding	mt-Nd3	ENSMUST00000082411	protein_coding	principal1	MT	1	9459	348
ENSMUSG00000064361	Mt_tRNA	mt-Tr	ENSMUST00000082412	Mt_tRNA		MT	1	9808	68
ENSMUSG00000065947	protein_coding	mt-Nd4l	ENSMUST00000084013	protein_coding	principal1	MT	1	9877	297
ENSMUSG00000064363	protein_coding	mt-Nd4	ENSMUST00000082414	protein_coding	principal1	MT	1	10167	1378
ENSMUSG00000064364	Mt_tRNA	mt-Th	ENSMUST00000082415	Mt_tRNA		MT	1	11546	67
ENSMUSG00000064365	Mt_tRNA	mt-Ts2	ENSMUST00000082416	Mt_tRNA		MT	1	11613	59
ENSMUSG00000064366	Mt_tRNA	mt-Tl2	ENSMUST00000082417	Mt_tRNA		MT	1	11671	71
ENSMUSG00000064367	protein_coding	mt-Nd5	ENSMUST00000082418	protein_coding	principal1	MT	1	11742	1824
ENSMUSG00000064368	protein_coding	mt-Nd6	ENSMUST00000082419	protein_coding	principal1	MT	-1	14070	519
ENSMUSG00000064369	Mt_tRNA	mt-Te	ENSMUST00000082420	Mt_tRNA		MT	-1	14139	69
ENSMUSG00000064370	protein_coding	mt-Cytb	ENSMUST00000082421	protein_coding	principal1	MT	1	14145	1144
ENSMUSG00000064371	Mt_tRNA	mt-Tt	ENSMUST00000082422	Mt_tRNA		MT	1	15289	67
ENSMUSG00000064372	Mt_tRNA	mt-Tp	ENSMUST00000082423	Mt_tRNA		MT	-1	15422	67
ENSMUSG00000083145	processed_pseudogene	Gm12579	ENSMUST00000118040	processed_pseudogene		4	1	58611058	783
ENSMUSG00000070606	processed_pseudogene	Gm10298	ENSMUST00000074801	processed_pseudogene		7	-1	43387944	265
ENSMUSG00000113563	processed_pseudogene	Gm2492	ENSMUST00000221355	processed_pseudogene		13	-1	14221938	1394
ENSMUSG00000083255	processed_pseudogene	Gm12738	ENSMUST00000122349	processed_pseudogene		4	-1	108451342	536
ENSMUSG00000058873	processed_pseudogene	Gm5582	ENSMUST00000075251	processed_pseudogene		6	-1	131254049	522
ENSMUSG00000108287	unprocessed_pseudogene	Gm44473	ENSMUST00000204039	unprocessed_pseudogene		7	1	3046372	152
ENSMUSG00000107416	processed_pseudogene	Gm44030	ENSMUST00000204865	processed_pseudogene		6	1	42725591	432
ENSMUSG00000099867	unprocessed_pseudogene	Gm29320	ENSMUST00000185235	unprocessed_pseudogene		Y	-1	50985053	615
ENSMUSG00000107836	processed_pseudogene	Gm5315	ENSMUST00000204430	processed_pseudogene		6	-1	105065153	1897
ENSMUSG00000102294	lincRNA	Gm37544	ENSMUST00000192803	lincRNA		Y	1	18972545	174
ENSMUSG00000113888	processed_pseudogene	LOC667541	ENSMUST00000223408	processed_pseudogene		13	-1	50058385	278
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000176614	processed_transcript		11	1	69901072	469
ENSMUSG00000099896	lincRNA	Gm29278	ENSMUST00000189701	lincRNA		Y	1	75356342	1497
ENSMUSG00000087637	lincRNA	Gm11986	ENSMUST00000149481	lincRNA		11	-1	7290374	1439
ENSMUSG00000090126	transcribed_processed_pseudogene	4930519F09Rik	ENSMUST00000159347	processed_transcript		10	-1	28922395	618
ENSMUSG00000099896	lincRNA	Gm29278	ENSMUST00000186793	lincRNA		Y	1	75356794	437
ENSMUSG00000110301	lincRNA	Gm35363	ENSMUST00000209330	lincRNA		7	-1	101538330	1317
ENSMUSG00000068606	protein_coding	Gm4841	ENSMUST00000090260	protein_coding	principal1	18	-1	60273272	2839
ENSMUSG00000053490	protein_coding	Trim60	ENSMUST00000048565	protein_coding	principal1	8	-1	65018584	2670
ENSMUSG00000057817	protein_coding	Olfr1446	ENSMUST00000216805	protein_coding	principal1	19	-1	12893524	2417
ENSMUSG00000043319	protein_coding	Cox8c	ENSMUST00000053611	protein_coding	principal1	12	1	102899316	458
ENSMUSG00000089822	antisense	Gm15759	ENSMUST00000161126	antisense		1	-1	58315656	3723
ENSMUSG00000094205	protein_coding	Gm8926	ENSMUST00000167566	protein_coding	principal5	5	1	11770548	1098
ENSMUSG00000090126	transcribed_processed_pseudogene	4930519F09Rik	ENSMUST00000163084	transcribed_processed_pseudogene		10	-1	28923507	1111
ENSMUSG00000091292	unprocessed_pseudogene	Gm3104	ENSMUST00000171004	unprocessed_pseudogene		7	1	3086001	473
ENSMUSG00000112747	lincRNA	Gm48721	ENSMUST00000218793	lincRNA		10	-1	12009771	529
ENSMUSG00000100350	lincRNA	Gm29091	ENSMUST00000187289	lincRNA		Y	-1	86730781	2159
ENSMUSG00000110434	processed_pseudogene	Rps7-ps1	ENSMUST00000211928	processed_pseudogene		8	1	69540957	391
ENSMUSG00000107650	processed_pseudogene	Gm44032	ENSMUST00000204841	processed_pseudogene		6	-1	42734099	166
ENSMUSG00000094205	protein_coding	Gm8926	ENSMUST00000178158	protein_coding	alternative2	5	1	11771686	465
ENSMUSG00000111991	unprocessed_pseudogene	Gm47835	ENSMUST00000219942	unprocessed_pseudogene		10	1	28920497	244
ENSMUSG00000108284	processed_pseudogene	Gm44182	ENSMUST00000204052	processed_pseudogene		6	-1	131270543	115
ENSMUSG00000049287	protein_coding	Iba57	ENSMUST00000054523	protein_coding	principal1	11	-1	59163739	4021
ENSMUSG00000107972	processed_pseudogene	Gm18198	ENSMUST00000204986	processed_pseudogene		7	1	3097437	1551
ENSMUSG00000038422	protein_coding	Hdhd3	ENSMUST00000037820	protein_coding	principal1	4	-1	62502276	1205
ENSMUSG00000108237	lincRNA	Gm19757	ENSMUST00000205113	lincRNA		6	-1	105492668	2946
ENSMUSG00000084318	unprocessed_pseudogene	Gm11987	ENSMUST00000118524	unprocessed_pseudogene		11	-1	7995852	381
ENSMUSG00000057817	protein_coding	Olfr1446	ENSMUST00000081236	protein_coding	principal1	19	-1	12890658	1044
ENSMUSG00000103190	lincRNA	Gm34716	ENSMUST00000194060	lincRNA		Y	1	18994762	621
ENSMUSG00000013150	protein_coding	Gfod2	ENSMUST00000013294	protein_coding	principal1	8	-1	105758664	4352
ENSMUSG00000058743	protein_coding	Kcnj14	ENSMUST00000071937	protein_coding	principal1	7	-1	45824782	2681
ENSMUSG00000108775	processed_pseudogene	Gm44540	ENSMUST00000205640	processed_pseudogene		7	1	43394535	354
ENSMUSG00000103190	lincRNA	Gm34716	ENSMUST00000195018	lincRNA		Y	1	18994762	436
ENSMUSG00000090699	unprocessed_pseudogene	Gm9071	ENSMUST00000165915	unprocessed_pseudogene		12	1	3023883	474
ENSMUSG00000057817	protein_coding	Olfr1446	ENSMUST00000207741	protein_coding		19	-1	12893524	486
ENSMUSG00000038422	protein_coding	Hdhd3	ENSMUST00000140038	processed_transcript		4	-1	62503467	312
ENSMUSG00000101193	unprocessed_pseudogene	Gm21849	ENSMUST00000191571	unprocessed_pseudogene		Y	-1	51021792	696
ENSMUSG00000049287	protein_coding	Iba57	ENSMUST00000069631	protein_coding		11	-1	59163317	864
ENSMUSG00000058743	protein_coding	Kcnj14	ENSMUST00000210232	protein_coding		7	-1	45823344	599
ENSMUSG00000112775	lincRNA	Gm48722	ENSMUST00000220015	lincRNA		10	-1	12031440	172
ENSMUSG00000100892	protein_coding	Gm20897	ENSMUST00000185240	protein_coding	principal1	Y	-1	38502238	923
ENSMUSG00000102867	lincRNA	Gm37635	ENSMUST00000193129	lincRNA		Y	1	19038589	174
ENSMUSG00000108259	processed_pseudogene	Gm6727	ENSMUST00000204102	processed_pseudogene		7	-1	3103844	1518
ENSMUSG00000049287	protein_coding	Iba57	ENSMUST00000137433	protein_coding		11	-1	59163700	654
ENSMUSG00000112156	lincRNA	Gm48723	ENSMUST00000219252	lincRNA		10	-1	12324661	338
ENSMUSG00000086470	lincRNA	Gm12580	ENSMUST00000127456	lincRNA		4	-1	58658592	1751
ENSMUSG00000111594	unprocessed_pseudogene	Gm3365	ENSMUST00000216296	unprocessed_pseudogene		8	-1	69585162	1480
ENSMUSG00000020303	protein_coding	Stc2	ENSMUST00000020546	protein_coding	principal1	11	-1	31370074	3940
ENSMUSG00000108270	processed_pseudogene	Gm4602	ENSMUST00000203198	processed_pseudogene		6	1	105531520	308
ENSMUSG00000013150	protein_coding	Gfod2	ENSMUST00000155038	protein_coding		8	-1	105758630	951
ENSMUSG00000095831	protein_coding	Olfr453	ENSMUST00000213997	protein_coding	principal1	6	1	42739371	3082
ENSMUSG00000104578	processed_pseudogene	Gm8929	ENSMUST00000197781	processed_pseudogene		5	1	11780120	1132
ENSMUSG00000002804	protein_coding	Nudt14	ENSMUST00000221397	protein_coding	principal1	12	-1	112942124	1241
ENSMUSG00000079042	protein_coding	Apela	ENSMUST00000142822	protein_coding	principal1	8	-1	65037336	975
ENSMUSG00000095831	protein_coding	Olfr453	ENSMUST00000053647	protein_coding	principal1	6	1	42744039	954
ENSMUSG00000013150	protein_coding	Gfod2	ENSMUST00000135959	processed_transcript		8	-1	105758596	547
ENSMUSG00000075227	protein_coding	Znhit2	ENSMUST00000162726	protein_coding	principal1	19	1	6061192	1281
ENSMUSG00000020303	protein_coding	Stc2	ENSMUST00000152094	processed_transcript		11	-1	31370047	447
ENSMUSG00000079042	protein_coding	Apela	ENSMUST00000124790	protein_coding	principal1	8	-1	65037172	945
ENSMUSG00000105479	lincRNA	Gm43132	ENSMUST00000199106	lincRNA		5	-1	11844359	792
ENSMUSG00000106492	lincRNA	Gm29707	ENSMUST00000198744	lincRNA		5	1	102070218	659
ENSMUSG00000002804	protein_coding	Nudt14	ENSMUST00000222932	retained_intron		12	-1	112939004	770
ENSMUSG00000020303	protein_coding	Stc2	ENSMUST00000134199	processed_transcript		11	-1	31369056	486
ENSMUSG00000107818	unprocessed_pseudogene	Gm44034	ENSMUST00000203812	unprocessed_pseudogene		6	1	42745187	64
ENSMUSG00000044164	protein_coding	Rnf182	ENSMUST00000059986	protein_coding	principal1	13	1	43615710	3544
ENSMUSG00000107349	processed_pseudogene	Gm6655	ENSMUST00000201932	processed_pseudogene		6	1	19119469	1309
ENSMUSG00000114442	lincRNA	F630042J09Rik	ENSMUST00000224844	lincRNA		13	1	67278577	4257
ENSMUSG00000100315	lincRNA	1700031P21Rik	ENSMUST00000187526	lincRNA		12	-1	52602322	307
ENSMUSG00000106492	lincRNA	Gm29707	ENSMUST00000196325	lincRNA		5	1	102070850	491
ENSMUSG00000055452	processed_pseudogene	Gm7353	ENSMUST00000069044	processed_pseudogene		7	-1	3111963	2866
ENSMUSG00000020303	protein_coding	Stc2	ENSMUST00000139991	processed_transcript		11	-1	31369103	3982
ENSMUSG00000109718	protein_coding	Trim61	ENSMUST00000211310	protein_coding		8	-1	65014510	417
ENSMUSG00000002804	protein_coding	Nudt14	ENSMUST00000222793	retained_intron		12	-1	112942087	945
ENSMUSG00000112131	lincRNA	Gm48724	ENSMUST00000218657	lincRNA		10	-1	12329224	1864
ENSMUSG00000105088	processed_pseudogene	Gm17978	ENSMUST00000195986	processed_pseudogene		5	1	102159526	769
ENSMUSG00000001761	protein_coding	Smo	ENSMUST00000201515	retained_intron		6	1	29735503	2502
ENSMUSG00000100315	lincRNA	1700031P21Rik	ENSMUST00000191400	lincRNA		12	-1	52602318	466
ENSMUSG00000107523	processed_pseudogene	Gm44451	ENSMUST00000203767	processed_pseudogene		7	-1	3116478	483
ENSMUSG00000114442	lincRNA	F630042J09Rik	ENSMUST00000224856	lincRNA		13	1	67278596	3162
ENSMUSG00000020303	protein_coding	Stc2	ENSMUST00000149467	processed_transcript		11	-1	31368166	544
ENSMUSG00000100615	processed_pseudogene	Gm5511	ENSMUST00000189380	processed_pseudogene		19	1	11438031	802
ENSMUSG00000044164	protein_coding	Rnf182	ENSMUST00000161817	protein_coding		13	1	43615983	457
ENSMUSG00000002804	protein_coding	Nudt14	ENSMUST00000002881	protein_coding		12	-1	112942117	734
ENSMUSG00000100315	lincRNA	1700031P21Rik	ENSMUST00000186498	lincRNA		12	-1	52602319	446
ENSMUSG00000112147	processed_pseudogene	Gm18244	ENSMUST00000219747	processed_pseudogene		12	1	3039869	1566
ENSMUSG00000002804	protein_coding	Nudt14	ENSMUST00000221497	protein_coding		12	-1	112942110	355
ENSMUSG00000041886	protein_coding	Macc1	ENSMUST00000222784	protein_coding	principal1	12	1	119314270	4710
ENSMUSG00000106189	processed_pseudogene	Gm42933	ENSMUST00000196547	processed_pseudogene		5	1	102162291	2069
ENSMUSG00000109718	protein_coding	Trim61	ENSMUST00000078409	protein_coding	principal1	8	-1	65018523	1977
ENSMUSG00000108044	processed_pseudogene	Gm44459	ENSMUST00000203926	processed_pseudogene		7	-1	3120272	160
ENSMUSG00000100915	lincRNA	Gm29321	ENSMUST00000186727	lincRNA		Y	1	51063067	1499
ENSMUSG00000041886	protein_coding	Macc1	ENSMUST00000221917	protein_coding	principal1	12	1	119327608	4272
ENSMUSG00000109965	lincRNA	Gm45274	ENSMUST00000209938	lincRNA		8	1	15046212	647
ENSMUSG00000114121	lincRNA	Gm47728	ENSMUST00000222349	lincRNA		13	1	43683120	746
ENSMUSG00000112541	processed_pseudogene	Gm9072	ENSMUST00000218390	processed_pseudogene		12	-1	3046242	1514
ENSMUSG00000104927	lincRNA	Gm43388	ENSMUST00000197818	lincRNA		16	-1	19236776	1225
ENSMUSG00000106295	processed_pseudogene	Gm42932	ENSMUST00000197280	processed_pseudogene		5	1	102416203	744
ENSMUSG00000109805	processed_transcript	Gm45886	ENSMUST00000148141	processed_transcript		8	-1	65037096	342
ENSMUSG00000100915	lincRNA	Gm29321	ENSMUST00000188015	lincRNA		Y	1	51063520	438
ENSMUSG00000090942	protein_coding	F830016B08Rik	ENSMUST00000171297	protein_coding	principal1	18	1	60293380	3297
ENSMUSG00000041886	protein_coding	Macc1	ENSMUST00000222058	protein_coding	principal1	12	1	119390375	4193
ENSMUSG00000100915	lincRNA	Gm29321	ENSMUST00000188832	lincRNA		Y	1	51063520	622
ENSMUSG00000039063	protein_coding	Echdc3	ENSMUST00000042658	protein_coding	principal1	2	-1	6213033	1851
ENSMUSG00000112240	processed_pseudogene	Gm48310	ENSMUST00000219169	processed_pseudogene		12	-1	3055401	475
ENSMUSG00000109650	processed_pseudogene	Gm45448	ENSMUST00000211739	processed_pseudogene		8	1	65015592	209
ENSMUSG00000105128	TEC	Gm42870	ENSMUST00000199355	TEC		16	1	19231333	3470
ENSMUSG00000118361	lincRNA	Gm50237	ENSMUST00000238180	lincRNA		18	-1	60356179	466
ENSMUSG00000062661	protein_coding	Ncs1	ENSMUST00000000199	protein_coding	principal1	2	1	31245823	4653
ENSMUSG00000041886	protein_coding	Macc1	ENSMUST00000221866	protein_coding	principal1	12	1	119392583	6937
ENSMUSG00000039063	protein_coding	Echdc3	ENSMUST00000132810	processed_transcript		2	-1	6196208	769
ENSMUSG00000107217	lincRNA	4930524B17Rik	ENSMUST00000200755	lincRNA		6	-1	19278843	1870
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000228467	protein_coding	principal1	7	-1	26618464	6915
ENSMUSG00000107956	lincRNA	Speer9-ps1	ENSMUST00000203447	lincRNA		7	1	3128146	775
ENSMUSG00000039063	protein_coding	Echdc3	ENSMUST00000114941	retained_intron		2	-1	6212979	818
ENSMUSG00000107240	TEC	Gm43231	ENSMUST00000202960	TEC		5	-1	115429475	2258
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000227479	protein_coding	principal1	7	-1	26618464	6525
ENSMUSG00000092168	unprocessed_pseudogene	Gm9075	ENSMUST00000168738	unprocessed_pseudogene		12	1	3082667	794
ENSMUSG00000041886	protein_coding	Macc1	ENSMUST00000048880	protein_coding	principal1	12	1	119443410	3818
ENSMUSG00000031633	protein_coding	Slc25a4	ENSMUST00000034049	protein_coding	principal1	8	-1	46211284	1925
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000228367	protein_coding	principal1	7	-1	26618464	6982
ENSMUSG00000087485	lincRNA	Gm13383	ENSMUST00000131190	lincRNA		2	-1	6257266	1171
ENSMUSG00000062661	protein_coding	Ncs1	ENSMUST00000150670	nonsense_mediated_decay		2	1	31246166	498
ENSMUSG00000118413	processed_pseudogene	Gm29708	ENSMUST00000238625	processed_pseudogene		7	1	3149991	946
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000228004	protein_coding	principal1	7	-1	26618464	5682
ENSMUSG00000031633	protein_coding	Slc25a4	ENSMUST00000155986	retained_intron		8	-1	46211030	1275
ENSMUSG00000113192	processed_pseudogene	Gm18032	ENSMUST00000222541	processed_pseudogene		12	1	119352518	538
ENSMUSG00000020635	protein_coding	Fkbp1b	ENSMUST00000020964	protein_coding	principal1	12	-1	4841591	976
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000227695	protein_coding	principal1	7	-1	26618464	5292
ENSMUSG00000021456	protein_coding	Fbp2	ENSMUST00000021907	protein_coding	principal1	13	-1	62858422	1354
ENSMUSG00000082648	processed_pseudogene	Gm11366	ENSMUST00000119279	processed_pseudogene		13	1	30181716	429
ENSMUSG00000038663	protein_coding	Fsd2	ENSMUST00000042318	protein_coding	principal1	7	-1	81566944	3985
ENSMUSG00000106885	processed_pseudogene	Eif3s6-ps4	ENSMUST00000202873	processed_pseudogene		6	-1	19319378	1388
ENSMUSG00000098947	polymorphic_pseudogene	V1rg10	ENSMUST00000183378	polymorphic_pseudogene	principal1	5	-1	3001052	937
ENSMUSG00000020635	protein_coding	Fkbp1b	ENSMUST00000219880	protein_coding		12	-1	4841435	246
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000228133	protein_coding	principal1	7	-1	26618464	5749
ENSMUSG00000087125	antisense	A230108P19Rik	ENSMUST00000151782	antisense		2	1	6193251	2500
ENSMUSG00000021456	protein_coding	Fbp2	ENSMUST00000222000	processed_transcript		13	-1	62856309	371
ENSMUSG00000090577	unprocessed_pseudogene	Gm3027	ENSMUST00000167579	unprocessed_pseudogene		5	1	3030238	451
ENSMUSG00000038732	protein_coding	Mboat1	ENSMUST00000153269	processed_transcript		13	1	30136489	854
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000227264	protein_coding	principal1	7	-1	26618464	5589
ENSMUSG00000101050	lincRNA	Gm28774	ENSMUST00000187087	lincRNA		Y	-1	38564300	1498
ENSMUSG00000076939	IG_V_gene	Iglv3	ENSMUST00000103751	IG_V_gene	principal1	16	-1	19241690	381
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000228676	protein_coding	principal1	7	-1	26618464	5199
ENSMUSG00000102968	lincRNA	Gm35070	ENSMUST00000195750	lincRNA		Y	1	19059861	436
ENSMUSG00000101050	lincRNA	Gm28774	ENSMUST00000188107	lincRNA		Y	-1	38563847	437
ENSMUSG00000038732	protein_coding	Mboat1	ENSMUST00000152798	processed_transcript		13	1	30136489	928
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000226694	protein_coding	principal1	7	-1	26618464	5656
ENSMUSG00000102968	lincRNA	Gm35070	ENSMUST00000192589	lincRNA		Y	1	19059861	621
ENSMUSG00000110250	unprocessed_pseudogene	Gm9077	ENSMUST00000210657	unprocessed_pseudogene		12	1	3171874	2298
ENSMUSG00000043448	protein_coding	Gjc2	ENSMUST00000108793	protein_coding	principal1	11	-1	59182826	2187
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000227461	protein_coding	principal1	7	-1	26618464	5318
ENSMUSG00000031489	protein_coding	Adrb3	ENSMUST00000081438	protein_coding	principal2	8	-1	27229588	2795
ENSMUSG00000105722	processed_pseudogene	Gm18187	ENSMUST00000196476	processed_pseudogene		5	1	3041627	984
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000227411	protein_coding	principal1	7	-1	26618464	4928
ENSMUSG00000043448	protein_coding	Gjc2	ENSMUST00000108790	protein_coding	principal1	11	-1	59183213	2169
ENSMUSG00000031489	protein_coding	Adrb3	ENSMUST00000121838	protein_coding	principal2	8	-1	27228583	1864
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000228633	protein_coding	principal1	7	-1	26618464	5385
ENSMUSG00000049109	protein_coding	Themis	ENSMUST00000060409	protein_coding	alternative2	10	1	28668360	2278
ENSMUSG00000112146	lincRNA	Gm46210	ENSMUST00000218800	lincRNA		10	1	9901313	577
ENSMUSG00000091924	protein_coding	Vmn1r185	ENSMUST00000171039	protein_coding	principal1	7	-1	26612164	1144
ENSMUSG00000103371	protein_coding	Gm35134	ENSMUST00000194086	protein_coding	principal1	Y	1	19113007	923
ENSMUSG00000031489	protein_coding	Adrb3	ENSMUST00000117565	protein_coding	alternative2	8	-1	27228494	1336
ENSMUSG00000106586	antisense	1700013M08Rik	ENSMUST00000197709	antisense		5	-1	102483289	683
ENSMUSG00000103489	lincRNA	Gm37998	ENSMUST00000195699	lincRNA		Y	1	19157403	166
ENSMUSG00000031489	protein_coding	Adrb3	ENSMUST00000211346	processed_transcript		8	-1	27250616	669
ENSMUSG00000021431	protein_coding	Snrnp48	ENSMUST00000223557	processed_transcript		13	1	38204938	871
ENSMUSG00000089793	processed_pseudogene	Gm16112	ENSMUST00000159075	processed_pseudogene		5	1	22292787	382
ENSMUSG00000103796	TEC	Gm38094	ENSMUST00000195864	TEC		Y	-1	19240380	2978
ENSMUSG00000074978	processed_pseudogene	Actg-ps1	ENSMUST00000099636	processed_pseudogene		8	1	46228994	1124
ENSMUSG00000106586	antisense	1700013M08Rik	ENSMUST00000200080	antisense		5	-1	102479996	798
ENSMUSG00000105766	TEC	Gm19666	ENSMUST00000198176	TEC		5	-1	21957986	1893
ENSMUSG00000094036	protein_coding	Gm6465	ENSMUST00000168154	protein_coding	principal1	5	1	11845539	1098
ENSMUSG00000049109	protein_coding	Themis	ENSMUST00000056097	protein_coding	principal2	10	1	28668360	5082
ENSMUSG00000031489	protein_coding	Adrb3	ENSMUST00000209447	processed_transcript		8	-1	27230824	450
ENSMUSG00000096769	protein_coding	Gm21117	ENSMUST00000185327	protein_coding	principal1	Y	1	51125220	925
ENSMUSG00000090197	processed_pseudogene	Dnaja1-ps	ENSMUST00000162103	processed_pseudogene		5	-1	21952499	642
ENSMUSG00000096769	protein_coding	Gm21117	ENSMUST00000180133	protein_coding		Y	1	51126655	498
ENSMUSG00000109674	antisense	Gm45470	ENSMUST00000209685	antisense		8	1	27228686	7044
ENSMUSG00000102552	unprocessed_pseudogene	Gm21763	ENSMUST00000195140	unprocessed_pseudogene		Y	-1	19515014	696
ENSMUSG00000021431	protein_coding	Snrnp48	ENSMUST00000223814	retained_intron		13	1	38204939	3740
ENSMUSG00000092275	lincRNA	Gm20465	ENSMUST00000174768	lincRNA		5	-1	33311150	1932
ENSMUSG00000109674	antisense	Gm45470	ENSMUST00000210817	antisense		8	1	27232378	2192
ENSMUSG00000054753	protein_coding	AU018091	ENSMUST00000205185	processed_transcript		7	-1	3164501	3361
ENSMUSG00000099793	lincRNA	Gm28775	ENSMUST00000186918	lincRNA		Y	1	38596217	2167
ENSMUSG00000104426	unprocessed_pseudogene	Gm38369	ENSMUST00000195101	unprocessed_pseudogene		Y	-1	19672197	693
ENSMUSG00000049109	protein_coding	Themis	ENSMUST00000162343	retained_intron		10	1	28668395	3403
ENSMUSG00000094612	protein_coding	Olfr491	ENSMUST00000209545	protein_coding	principal1	7	1	108313482	1944
ENSMUSG00000073152	antisense	Gm10475	ENSMUST00000084713	antisense		5	1	21910931	1796
ENSMUSG00000107100	processed_pseudogene	Gm18482	ENSMUST00000202405	processed_pseudogene		6	-1	19777545	760
ENSMUSG00000102304	unprocessed_pseudogene	Gm35843	ENSMUST00000193716	unprocessed_pseudogene		Y	1	19869287	666
ENSMUSG00000049109	protein_coding	Themis	ENSMUST00000105516	protein_coding	alternative2	10	1	28668397	2361
ENSMUSG00000089910	processed_pseudogene	Gm16113	ENSMUST00000159629	processed_pseudogene		5	-1	22281582	372
ENSMUSG00000100365	unprocessed_pseudogene	Gm29319	ENSMUST00000188060	unprocessed_pseudogene		Y	-1	51213331	696
ENSMUSG00000094282	protein_coding	Cfap73	ENSMUST00000177908	protein_coding	principal1	5	-1	120634235	921
ENSMUSG00000090226	antisense	Gm16110	ENSMUST00000161473	antisense		5	1	22334442	892
ENSMUSG00000099985	lincRNA	Gm28317	ENSMUST00000187200	lincRNA		Y	-1	51254613	2166
ENSMUSG00000084211	processed_pseudogene	Gm11949	ENSMUST00000117640	processed_pseudogene		11	-1	3625848	372
ENSMUSG00000044633	lincRNA	B530045E10Rik	ENSMUST00000189035	lincRNA		10	1	99298888	3138
ENSMUSG00000094612	protein_coding	Olfr491	ENSMUST00000214605	protein_coding	principal1	7	1	108313451	2136
ENSMUSG00000090008	processed_pseudogene	Gm16111	ENSMUST00000162128	processed_pseudogene		5	1	21889780	285
ENSMUSG00000060303	protein_coding	Olfr1447	ENSMUST00000216989	protein_coding	principal1	19	-1	12903743	2586
ENSMUSG00000051729	processed_transcript	Gm5087	ENSMUST00000060526	lincRNA		14	-1	13284638	1921
ENSMUSG00000024513	protein_coding	Mbd2	ENSMUST00000074058	protein_coding	principal1	18	1	70568189	1953
ENSMUSG00000107191	antisense	Gm43579	ENSMUST00000202387	antisense		5	-1	120627621	1307
ENSMUSG00000049109	protein_coding	Themis	ENSMUST00000159927	nonsense_mediated_decay		10	1	28668627	4827
ENSMUSG00000106814	processed_pseudogene	Gm43501	ENSMUST00000202513	processed_pseudogene		6	1	19784686	107
ENSMUSG00000049109	protein_coding	Themis	ENSMUST00000162202	nonsense_mediated_decay		10	1	28668633	1252
ENSMUSG00000060303	protein_coding	Olfr1447	ENSMUST00000071484	protein_coding	principal1	19	-1	12901861	1113
ENSMUSG00000094612	protein_coding	Olfr491	ENSMUST00000053179	protein_coding	principal1	7	1	108316896	933
ENSMUSG00000049109	protein_coding	Themis	ENSMUST00000161345	protein_coding		10	1	28668633	636
ENSMUSG00000044633	lincRNA	B530045E10Rik	ENSMUST00000220146	lincRNA		10	1	99299166	3244
ENSMUSG00000079554	protein_coding	Aox2	ENSMUST00000114366	protein_coding	principal1	1	1	58278326	5771
ENSMUSG00000049109	protein_coding	Themis	ENSMUST00000219119	retained_intron		10	1	28737425	3461
ENSMUSG00000044633	lincRNA	B530045E10Rik	ENSMUST00000218725	lincRNA		10	1	99402790	757
ENSMUSG00000051729	processed_transcript	Gm5087	ENSMUST00000225820	lincRNA		14	-1	13170718	645
ENSMUSG00000060303	protein_coding	Olfr1447	ENSMUST00000208343	protein_coding		19	-1	12903730	560
ENSMUSG00000024513	protein_coding	Mbd2	ENSMUST00000114946	protein_coding		18	1	70568334	1290
ENSMUSG00000109497	protein_coding	Olfr492	ENSMUST00000079865	protein_coding	principal1	7	-1	108323674	945
ENSMUSG00000112111	processed_pseudogene	Gm47834	ENSMUST00000218178	processed_pseudogene		10	-1	28806756	463
ENSMUSG00000109160	processed_transcript	4930598N05Rik	ENSMUST00000208997	lincRNA		10	1	10184800	83
ENSMUSG00000038732	protein_coding	Mboat1	ENSMUST00000047311	protein_coding	principal1	13	1	30136489	2905
ENSMUSG00000044633	lincRNA	B530045E10Rik	ENSMUST00000060657	lincRNA		10	1	99420522	2526
ENSMUSG00000051729	processed_transcript	Gm5087	ENSMUST00000161835	lincRNA		14	-1	13170902	814
ENSMUSG00000109160	processed_transcript	4930598N05Rik	ENSMUST00000207733	lincRNA		10	1	10234971	675
ENSMUSG00000024513	protein_coding	Mbd2	ENSMUST00000127260	nonsense_mediated_decay		18	1	70580789	694
ENSMUSG00000101853	processed_pseudogene	Gm28627	ENSMUST00000186141	processed_pseudogene		1	1	86328039	453
ENSMUSG00000099562	processed_pseudogene	Gm19027	ENSMUST00000187291	processed_pseudogene		1	-1	79507157	1355
ENSMUSG00000033706	protein_coding	Smyd5	ENSMUST00000045693	protein_coding	principal1	6	1	85431989	2486
ENSMUSG00000038732	protein_coding	Mboat1	ENSMUST00000220870	processed_transcript		13	1	30166999	652
ENSMUSG00000051729	processed_transcript	Gm5087	ENSMUST00000140967	bidirectional_promoter_lncRNA		14	-1	13284630	959
ENSMUSG00000024513	protein_coding	Mbd2	ENSMUST00000133889	retained_intron		18	1	70593255	755
ENSMUSG00000109160	processed_transcript	4930598N05Rik	ENSMUST00000207048	lincRNA		10	1	10234991	550
ENSMUSG00000024513	protein_coding	Mbd2	ENSMUST00000128555	retained_intron		18	1	70617773	494
ENSMUSG00000083548	processed_pseudogene	Gm11514	ENSMUST00000117670	processed_pseudogene		11	1	95176813	432
ENSMUSG00000109160	processed_transcript	4930598N05Rik	ENSMUST00000207631	processed_transcript		10	1	10234994	594
ENSMUSG00000038732	protein_coding	Mboat1	ENSMUST00000222095	processed_transcript		13	1	30231853	932
ENSMUSG00000109160	processed_transcript	4930598N05Rik	ENSMUST00000208693	lincRNA		10	1	10234994	873
ENSMUSG00000038213	protein_coding	Tapbpl	ENSMUST00000043422	protein_coding	principal1	6	-1	125231860	2352
ENSMUSG00000109160	processed_transcript	4930598N05Rik	ENSMUST00000207288	processed_transcript		10	1	10235001	582
ENSMUSG00000109160	processed_transcript	4930598N05Rik	ENSMUST00000208935	processed_transcript		10	1	10235461	1370
ENSMUSG00000033706	protein_coding	Smyd5	ENSMUST00000152218	retained_intron		6	1	85432002	704
ENSMUSG00000090665	processed_pseudogene	Gad1-ps	ENSMUST00000167243	processed_pseudogene		10	1	99444044	1776
ENSMUSG00000112074	lincRNA	Gm48278	ENSMUST00000219020	lincRNA		10	1	10083943	1474
ENSMUSG00000033706	protein_coding	Smyd5	ENSMUST00000204615	retained_intron		6	1	85432073	746
ENSMUSG00000004069	protein_coding	Dnaja3	ENSMUST00000144815	processed_transcript		16	1	4639989	487
ENSMUSG00000112406	antisense	4921515L22Rik	ENSMUST00000218993	antisense		10	1	88135919	1537
ENSMUSG00000118578	protein_coding	AL845275.1	ENSMUST00000238876	protein_coding	principal1	2	-1	6323080	818
ENSMUSG00000033706	protein_coding	Smyd5	ENSMUST00000204428	retained_intron		6	1	85439144	2812
ENSMUSG00000034031	protein_coding	Ccdc182	ENSMUST00000037268	protein_coding	principal1	11	1	88294058	1204
ENSMUSG00000062519	protein_coding	Zfp398	ENSMUST00000146202	retained_intron		6	1	47835661	3656
ENSMUSG00000112265	lincRNA	Gm34983	ENSMUST00000220432	lincRNA		10	1	99459689	494
ENSMUSG00000108973	processed_pseudogene	Gm44555	ENSMUST00000209008	processed_pseudogene		10	1	10193524	148
ENSMUSG00000112713	lincRNA	Gm48281	ENSMUST00000217707	lincRNA		10	-1	10110099	716
ENSMUSG00000085716	antisense	Gm13388	ENSMUST00000126659	antisense		2	-1	6436033	425
ENSMUSG00000112060	lincRNA	Gm48279	ENSMUST00000219242	lincRNA		10	1	10122486	820
ENSMUSG00000112265	lincRNA	Gm34983	ENSMUST00000219484	lincRNA		10	1	99459962	396
ENSMUSG00000112059	processed_pseudogene	Gm48282	ENSMUST00000219625	processed_pseudogene		10	1	10040920	507
ENSMUSG00000054753	protein_coding	AU018091	ENSMUST00000171749	protein_coding	principal1	7	-1	3169203	3449
ENSMUSG00000112082	lincRNA	Gm35035	ENSMUST00000218838	lincRNA		10	-1	99460230	628
ENSMUSG00000112589	processed_pseudogene	Gm48280	ENSMUST00000218822	processed_pseudogene		10	1	10131272	369
ENSMUSG00000054753	protein_coding	AU018091	ENSMUST00000203937	protein_coding		7	-1	3169105	535
ENSMUSG00000112219	lincRNA	Gm31904	ENSMUST00000219446	lincRNA		10	-1	10234850	877
ENSMUSG00000101621	lincRNA	Gm28905	ENSMUST00000186088	lincRNA		10	1	9976627	275
ENSMUSG00000035383	protein_coding	Pmch	ENSMUST00000048621	protein_coding	principal1	10	1	88091072	749
ENSMUSG00000101621	lincRNA	Gm28905	ENSMUST00000219328	lincRNA		10	1	9976690	1377
ENSMUSG00000112279	unprocessed_pseudogene	Gm18774	ENSMUST00000218269	unprocessed_pseudogene		12	1	3216912	601
ENSMUSG00000106410	processed_pseudogene	Gm29755	ENSMUST00000196976	processed_pseudogene		5	1	11855234	948
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000153274	protein_coding		5	1	24423837	405
ENSMUSG00000106520	processed_pseudogene	Gm8706	ENSMUST00000197372	processed_pseudogene		5	-1	3048006	1491
ENSMUSG00000033706	protein_coding	Smyd5	ENSMUST00000134405	retained_intron		6	1	85441630	964
ENSMUSG00000107470	processed_pseudogene	Gm3375	ENSMUST00000203929	processed_pseudogene		7	1	3181093	796
ENSMUSG00000033706	protein_coding	Smyd5	ENSMUST00000156322	processed_transcript		6	1	85441725	477
ENSMUSG00000044502	protein_coding	Bod1	ENSMUST00000058060	protein_coding	principal1	11	-1	31671885	1394
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000127315	processed_transcript		5	1	24423853	826
ENSMUSG00000106504	processed_pseudogene	Gm43529	ENSMUST00000199178	processed_pseudogene		5	-1	3057032	412
ENSMUSG00000021431	protein_coding	Snrnp48	ENSMUST00000091641	protein_coding	principal1	13	1	38204945	1785
ENSMUSG00000037103	protein_coding	Dcaf15	ENSMUST00000041367	protein_coding		8	-1	84104762	2312
ENSMUSG00000112719	transcribed_processed_pseudogene	Gm45925	ENSMUST00000218882	processed_transcript		12	-1	3229322	744
ENSMUSG00000112719	transcribed_processed_pseudogene	Gm45925	ENSMUST00000219904	transcribed_processed_pseudogene		12	-1	3229891	1136
ENSMUSG00000090701	unprocessed_pseudogene	Gm6486	ENSMUST00000166202	unprocessed_pseudogene		5	1	3070743	434
ENSMUSG00000091936	unprocessed_pseudogene	Gm3053	ENSMUST00000161709	unprocessed_pseudogene		5	1	3090769	616
ENSMUSG00000044502	protein_coding	Bod1	ENSMUST00000109415	protein_coding	principal1	11	-1	31671727	799
ENSMUSG00000033706	protein_coding	Smyd5	ENSMUST00000130928	retained_intron		6	1	85441740	830
ENSMUSG00000106399	processed_pseudogene	Gm43530	ENSMUST00000195920	processed_pseudogene		5	1	3099390	274
ENSMUSG00000037103	protein_coding	Dcaf15	ENSMUST00000210279	protein_coding	principal1	8	-1	84104763	2199
ENSMUSG00000091483	unprocessed_pseudogene	Gm8715	ENSMUST00000162728	unprocessed_pseudogene		5	1	3123777	531
ENSMUSG00000103635	TEC	Gm38061	ENSMUST00000192490	TEC		11	1	31698648	365
ENSMUSG00000033706	protein_coding	Smyd5	ENSMUST00000153749	processed_transcript		6	1	85442573	613
ENSMUSG00000105800	unprocessed_pseudogene	Gm18985	ENSMUST00000196472	unprocessed_pseudogene		5	1	3212335	1079
ENSMUSG00000037103	protein_coding	Dcaf15	ENSMUST00000210625	nonsense_mediated_decay		8	-1	84104768	432
ENSMUSG00000110943	processed_pseudogene	Gm30674	ENSMUST00000214523	processed_pseudogene		10	1	3104119	392
ENSMUSG00000021431	protein_coding	Snrnp48	ENSMUST00000223680	retained_intron		13	1	38204951	6689
ENSMUSG00000027221	protein_coding	Chst1	ENSMUST00000065797	protein_coding	principal1	2	1	92599707	2680
ENSMUSG00000021431	protein_coding	Snrnp48	ENSMUST00000224192	processed_transcript		13	1	38215936	594
ENSMUSG00000060427	protein_coding	Zfp868	ENSMUST00000121886	protein_coding	principal1	8	-1	69625548	2259
ENSMUSG00000021431	protein_coding	Snrnp48	ENSMUST00000223893	processed_transcript		13	1	38221119	382
ENSMUSG00000036560	protein_coding	Lgi4	ENSMUST00000039775	protein_coding	principal1	7	1	31059342	4037
ENSMUSG00000060427	protein_coding	Zfp868	ENSMUST00000140522	retained_intron		8	-1	69625545	914
ENSMUSG00000060427	protein_coding	Zfp868	ENSMUST00000150118	retained_intron		8	-1	69614063	413
ENSMUSG00000085992	lincRNA	Gm11515	ENSMUST00000150818	lincRNA		11	-1	95225632	701
ENSMUSG00000021431	protein_coding	Snrnp48	ENSMUST00000178564	protein_coding		13	1	38204951	847
ENSMUSG00000060427	protein_coding	Zfp868	ENSMUST00000074982	protein_coding	principal1	8	-1	69619352	1269
ENSMUSG00000112180	processed_pseudogene	Gm48085	ENSMUST00000218632	processed_pseudogene		10	-1	99538069	448
ENSMUSG00000036560	protein_coding	Lgi4	ENSMUST00000169785	nonsense_mediated_decay		7	1	31060567	491
ENSMUSG00000112503	transcribed_processed_pseudogene	Gm18409	ENSMUST00000220105	transcribed_processed_pseudogene		10	-1	99639250	529
ENSMUSG00000081733	processed_pseudogene	Gm12852	ENSMUST00000119478	processed_pseudogene		4	-1	99103778	719
ENSMUSG00000036560	protein_coding	Lgi4	ENSMUST00000164725	nonsense_mediated_decay		7	1	31060605	556
ENSMUSG00000043385	protein_coding	Olfr267	ENSMUST00000216719	protein_coding	principal1	4	-1	58787716	4050
ENSMUSG00000112503	transcribed_processed_pseudogene	Gm18409	ENSMUST00000218988	processed_transcript		10	-1	99641920	2506
ENSMUSG00000036560	protein_coding	Lgi4	ENSMUST00000172001	protein_coding		7	1	31063550	456
ENSMUSG00000043385	protein_coding	Olfr267	ENSMUST00000059608	protein_coding	principal1	4	-1	58785722	944
ENSMUSG00000111962	lincRNA	Gm20110	ENSMUST00000218263	lincRNA		10	1	99609171	2095
ENSMUSG00000062519	protein_coding	Zfp398	ENSMUST00000079881	protein_coding	principal1	6	1	47835664	2906
ENSMUSG00000078784	protein_coding	Rbis	ENSMUST00000185384	protein_coding	principal3	3	-1	14611285	435
ENSMUSG00000018765	protein_coding	Fxr2	ENSMUST00000018909	protein_coding	principal1	11	1	69632990	2951
ENSMUSG00000112412	lincRNA	Gm35239	ENSMUST00000218346	lincRNA		12	1	52607670	487
ENSMUSG00000118051	processed_pseudogene	Gm8714	ENSMUST00000236261	processed_pseudogene		18	1	60361455	1212
ENSMUSG00000018765	protein_coding	Fxr2	ENSMUST00000155513	processed_transcript		11	1	69640153	305
ENSMUSG00000001761	protein_coding	Smo	ENSMUST00000001812	protein_coding	principal1	6	1	29735694	3779
ENSMUSG00000018765	protein_coding	Fxr2	ENSMUST00000139605	processed_transcript		11	1	69643548	731
ENSMUSG00000062519	protein_coding	Zfp398	ENSMUST00000114598	protein_coding		6	1	47835695	8328
ENSMUSG00000029507	protein_coding	Pus1	ENSMUST00000112426	protein_coding		5	-1	110779967	1389
ENSMUSG00000078817	protein_coding	Nlrp12	ENSMUST00000108653	protein_coding	principal1	7	-1	3249613	6928
ENSMUSG00000078784	protein_coding	Rbis	ENSMUST00000108365	protein_coding	alternative2	3	-1	14611221	559
ENSMUSG00000018765	protein_coding	Fxr2	ENSMUST00000125989	processed_transcript		11	1	69649605	558
ENSMUSG00000018765	protein_coding	Fxr2	ENSMUST00000132742	processed_transcript		11	1	69651129	508
ENSMUSG00000107604	processed_pseudogene	Gm44041	ENSMUST00000203678	processed_pseudogene		6	1	47847743	396
ENSMUSG00000078817	protein_coding	Nlrp12	ENSMUST00000205233	retained_intron		7	-1	3249740	2742
ENSMUSG00000018765	protein_coding	Fxr2	ENSMUST00000125586	processed_transcript		11	1	69652320	464
ENSMUSG00000081564	processed_pseudogene	Gm13717	ENSMUST00000119868	processed_pseudogene		6	1	29750761	365
ENSMUSG00000078784	protein_coding	Rbis	ENSMUST00000186870	protein_coding	alternative2	3	-1	14611261	1174
ENSMUSG00000020872	protein_coding	Tac4	ENSMUST00000021242	protein_coding	principal1	11	1	95261529	1251
ENSMUSG00000113435	processed_pseudogene	Gm19441	ENSMUST00000221545	processed_pseudogene		12	1	40875537	330
ENSMUSG00000078784	protein_coding	Rbis	ENSMUST00000185423	protein_coding		3	-1	14611254	278
ENSMUSG00000054072	protein_coding	Iigp1	ENSMUST00000237794	processed_transcript		18	1	60376027	1334
ENSMUSG00000112693	transcribed_unprocessed_pseudogene	Gm5512	ENSMUST00000220222	processed_transcript		19	1	12905320	1522
ENSMUSG00000078784	protein_coding	Rbis	ENSMUST00000190064	retained_intron		3	-1	14611243	508
ENSMUSG00000112810	lincRNA	Gm35101	ENSMUST00000219218	lincRNA		10	1	99669514	243
ENSMUSG00000054072	protein_coding	Iigp1	ENSMUST00000235989	processed_transcript		18	1	60376028	1701
ENSMUSG00000062353	processed_pseudogene	Gm15772	ENSMUST00000118533	processed_pseudogene		5	1	3236431	438
ENSMUSG00000112693	transcribed_unprocessed_pseudogene	Gm5512	ENSMUST00000218013	transcribed_unprocessed_pseudogene		19	1	12905335	1353
ENSMUSG00000054072	protein_coding	Iigp1	ENSMUST00000066912	protein_coding	principal1	18	1	60376047	2927
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000141966	protein_coding		5	1	24423859	966
ENSMUSG00000118648	unprocessed_pseudogene	AC120367.1	ENSMUST00000239477	unprocessed_pseudogene		7	-1	26663151	60
ENSMUSG00000111106	processed_pseudogene	Gm3318	ENSMUST00000217604	processed_pseudogene		10	-1	3118987	1183
ENSMUSG00000054072	protein_coding	Iigp1	ENSMUST00000237185	protein_coding	principal1	18	1	60382683	2421
ENSMUSG00000106658	lincRNA	Gm36548	ENSMUST00000200222	lincRNA		5	1	3270319	494
ENSMUSG00000113510	processed_pseudogene	Gm7239	ENSMUST00000220981	processed_pseudogene		12	-1	40884614	860
ENSMUSG00000054072	protein_coding	Iigp1	ENSMUST00000032473	protein_coding	principal1	18	1	60376029	3121
ENSMUSG00000106658	lincRNA	Gm36548	ENSMUST00000197473	lincRNA		5	1	3270381	685
ENSMUSG00000113032	antisense	Gm47578	ENSMUST00000222959	antisense		10	1	99719143	6046
ENSMUSG00000112304	antisense	Gm35206	ENSMUST00000217945	antisense		10	1	99759506	1642
ENSMUSG00000103120	processed_pseudogene	Gm37392	ENSMUST00000192098	processed_pseudogene		2	-1	3066088	516
ENSMUSG00000113337	processed_pseudogene	Gm19220	ENSMUST00000222682	processed_pseudogene		12	1	40893485	803
ENSMUSG00000112463	processed_pseudogene	Gm47579	ENSMUST00000219892	processed_pseudogene		10	-1	99866020	649
ENSMUSG00000114799	processed_pseudogene	Gm47978	ENSMUST00000224243	processed_pseudogene		13	-1	38270609	222
ENSMUSG00000019841	protein_coding	Rev3l	ENSMUST00000019986	protein_coding	principal1	10	1	39732118	10713
ENSMUSG00000117515	processed_pseudogene	Gm6883	ENSMUST00000234328	processed_pseudogene		18	-1	47415361	897
ENSMUSG00000110909	lincRNA	B020014A21Rik	ENSMUST00000217333	lincRNA		10	-1	3133193	1938
ENSMUSG00000046934	protein_coding	Csl	ENSMUST00000056085	protein_coding	principal1	10	-1	99759658	1953
ENSMUSG00000030337	protein_coding	Vamp1	ENSMUST00000032487	protein_coding	principal3	6	1	125215551	2772
ENSMUSG00000048456	protein_coding	Olfr1448	ENSMUST00000213713	protein_coding	principal1	19	-1	12924419	4336
ENSMUSG00000071434	lincRNA	9230019H11Rik	ENSMUST00000095874	lincRNA		10	1	3119841	2801
ENSMUSG00000039760	protein_coding	Il22ra2	ENSMUST00000036564	protein_coding	principal1	10	1	19621998	2498
ENSMUSG00000035365	protein_coding	Parpbp	ENSMUST00000048518	protein_coding	principal1	10	-1	88146941	3594
ENSMUSG00000085976	lincRNA	Gm13816	ENSMUST00000152230	lincRNA		2	1	92742230	715
ENSMUSG00000048456	protein_coding	Olfr1448	ENSMUST00000216888	protein_coding	principal1	19	-1	12924419	4064
ENSMUSG00000019841	protein_coding	Rev3l	ENSMUST00000131186	nonsense_mediated_decay		10	1	39732127	10789
ENSMUSG00000107413	unprocessed_pseudogene	Gm20553	ENSMUST00000204205	unprocessed_pseudogene		7	-1	3265192	844
ENSMUSG00000048456	protein_coding	Olfr1448	ENSMUST00000213177	protein_coding	principal1	19	-1	12924419	3979
ENSMUSG00000107999	antisense	Gm44123	ENSMUST00000204662	antisense		6	1	90689731	577
ENSMUSG00000086980	processed_transcript	Gm13791	ENSMUST00000123263	processed_transcript		2	-1	92913663	608
ENSMUSG00000082586	unprocessed_pseudogene	Sult2a-ps1	ENSMUST00000120317	unprocessed_pseudogene		7	-1	13722465	341
ENSMUSG00000019841	protein_coding	Rev3l	ENSMUST00000139803	nonsense_mediated_decay		10	1	39825131	4858
ENSMUSG00000048456	protein_coding	Olfr1448	ENSMUST00000054737	protein_coding	principal1	19	-1	12920307	945
ENSMUSG00000006715	protein_coding	Gmnn	ENSMUST00000006898	protein_coding	principal1	13	-1	24761861	1127
ENSMUSG00000030337	protein_coding	Vamp1	ENSMUST00000100942	protein_coding	alternative2	6	1	125215581	3011
ENSMUSG00000057315	protein_coding	Arhgap24	ENSMUST00000094559	protein_coding	principal1	5	1	102481391	3346
ENSMUSG00000038242	protein_coding	Aox4	ENSMUST00000040442	protein_coding	principal1	1	1	58210397	4973
ENSMUSG00000019841	protein_coding	Rev3l	ENSMUST00000145333	retained_intron		10	1	39828274	2901
ENSMUSG00000082700	processed_pseudogene	Gm13792	ENSMUST00000121350	processed_pseudogene		2	-1	92873309	423
ENSMUSG00000117474	lincRNA	Gm50086	ENSMUST00000234542	lincRNA		18	-1	47437778	1256
ENSMUSG00000035365	protein_coding	Parpbp	ENSMUST00000164121	protein_coding		10	-1	88146878	637
ENSMUSG00000019841	protein_coding	Rev3l	ENSMUST00000123103	retained_intron		10	1	39858925	574
ENSMUSG00000028717	protein_coding	Tal1	ENSMUST00000161601	protein_coding	principal1	4	1	115057811	3703
ENSMUSG00000100887	lincRNA	Gm29297	ENSMUST00000188186	lincRNA		Y	1	86766062	1499
ENSMUSG00000029507	protein_coding	Pus1	ENSMUST00000031483	protein_coding	alternative2	5	-1	110780596	1814
ENSMUSG00000030337	protein_coding	Vamp1	ENSMUST00000063588	protein_coding		6	1	125215581	1400
ENSMUSG00000006715	protein_coding	Gmnn	ENSMUST00000110382	protein_coding	principal1	13	-1	24761923	963
ENSMUSG00000057315	protein_coding	Arhgap24	ENSMUST00000126125	retained_intron		5	1	102481530	4277
ENSMUSG00000030337	protein_coding	Vamp1	ENSMUST00000205223	protein_coding		6	1	125218574	413
ENSMUSG00000114166	processed_pseudogene	Gm18246	ENSMUST00000221023	processed_pseudogene		12	1	40917288	728
ENSMUSG00000019841	protein_coding	Rev3l	ENSMUST00000127726	retained_intron		10	1	39867109	799
ENSMUSG00000100887	lincRNA	Gm29297	ENSMUST00000186580	lincRNA		Y	1	86766516	437
ENSMUSG00000027552	protein_coding	E2f5	ENSMUST00000029069	protein_coding	principal2	3	1	14578641	1779
ENSMUSG00000035365	protein_coding	Parpbp	ENSMUST00000168163	protein_coding		10	-1	88146933	825
ENSMUSG00000019841	protein_coding	Rev3l	ENSMUST00000164763	protein_coding	principal1	10	1	39732364	10399
ENSMUSG00000006715	protein_coding	Gmnn	ENSMUST00000175689	protein_coding		13	-1	24761476	723
ENSMUSG00000030337	protein_coding	Vamp1	ENSMUST00000160523	processed_transcript		6	1	125231276	1353
ENSMUSG00000029507	protein_coding	Pus1	ENSMUST00000086643	protein_coding	principal4	5	-1	110780596	1868
ENSMUSG00000035365	protein_coding	Parpbp	ENSMUST00000164803	protein_coding		10	-1	88146878	545
ENSMUSG00000028717	protein_coding	Tal1	ENSMUST00000162489	protein_coding	principal1	4	1	115059508	2894
ENSMUSG00000006715	protein_coding	Gmnn	ENSMUST00000176890	protein_coding		13	-1	24761440	749
ENSMUSG00000030337	protein_coding	Vamp1	ENSMUST00000159547	processed_transcript		6	1	125231276	5709
ENSMUSG00000081608	processed_pseudogene	Gm16210	ENSMUST00000122161	processed_pseudogene		10	-1	39752868	610
ENSMUSG00000112026	TEC	Gm6653	ENSMUST00000218063	TEC		10	-1	88135853	1288
ENSMUSG00000027552	protein_coding	E2f5	ENSMUST00000165922	protein_coding	alternative2	3	1	14578671	1751
ENSMUSG00000040274	protein_coding	Cdk6	ENSMUST00000199156	protein_coding		5	1	3341485	425
ENSMUSG00000006715	protein_coding	Gmnn	ENSMUST00000177253	nonsense_mediated_decay		13	-1	24761897	387
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000167369	protein_coding	principal1	7	-1	31076704	2894
ENSMUSG00000114138	antisense	Gm36423	ENSMUST00000222215	antisense		13	1	9684226	1298
ENSMUSG00000040274	protein_coding	Cdk6	ENSMUST00000197607	protein_coding		5	1	3343732	376
ENSMUSG00000057315	protein_coding	Arhgap24	ENSMUST00000112854	protein_coding		5	1	102481553	2991
ENSMUSG00000081304	processed_pseudogene	Gm11509	ENSMUST00000117358	processed_pseudogene		11	1	88335660	325
ENSMUSG00000057315	protein_coding	Arhgap24	ENSMUST00000112853	protein_coding		5	1	102724973	2853
ENSMUSG00000039765	protein_coding	Cc2d2a	ENSMUST00000048150	protein_coding	principal1	5	1	43662346	5484
ENSMUSG00000028717	protein_coding	Tal1	ENSMUST00000030489	protein_coding	principal1	4	1	115056426	4213
ENSMUSG00000038242	protein_coding	Aox4	ENSMUST00000161833	processed_transcript		1	1	58210432	3902
ENSMUSG00000029507	protein_coding	Pus1	ENSMUST00000031481	protein_coding	alternative2	5	-1	110780659	1563
ENSMUSG00000029451	protein_coding	Gm13103	ENSMUST00000094522	protein_coding	principal2	4	1	143846497	1833
ENSMUSG00000039046	protein_coding	Usp6nl	ENSMUST00000114937	protein_coding	alternative2	2	1	6322667	7484
ENSMUSG00000057315	protein_coding	Arhgap24	ENSMUST00000112852	protein_coding		5	1	102768771	2783
ENSMUSG00000040650	protein_coding	Cyp2b23	ENSMUST00000077356	protein_coding	principal1	7	-1	26686437	2189
ENSMUSG00000028998	protein_coding	Tomm7	ENSMUST00000030851	protein_coding	principal1	5	-1	23844161	1125
ENSMUSG00000028717	protein_coding	Tal1	ENSMUST00000136946	protein_coding		4	1	115057438	683
ENSMUSG00000029599	protein_coding	Ddx54	ENSMUST00000031598	protein_coding	principal1	5	1	120612739	4322
ENSMUSG00000029507	protein_coding	Pus1	ENSMUST00000136483	protein_coding		5	-1	110780146	701
ENSMUSG00000038242	protein_coding	Aox4	ENSMUST00000159240	processed_transcript		1	1	58210451	1043
ENSMUSG00000038242	protein_coding	Aox4	ENSMUST00000189059	retained_intron		1	1	58211218	2145
ENSMUSG00000057315	protein_coding	Arhgap24	ENSMUST00000130222	processed_transcript		5	1	102809049	632
ENSMUSG00000114138	antisense	Gm36423	ENSMUST00000221492	antisense		13	1	9684230	528
ENSMUSG00000038242	protein_coding	Aox4	ENSMUST00000161926	retained_intron		1	1	58240606	340
ENSMUSG00000029507	protein_coding	Pus1	ENSMUST00000149208	protein_coding		5	-1	110780591	527
ENSMUSG00000029451	protein_coding	Gm13103	ENSMUST00000139747	protein_coding		4	1	143846507	736
ENSMUSG00000090598	processed_pseudogene	Gm8164	ENSMUST00000169120	processed_pseudogene		14	-1	4579002	1192
ENSMUSG00000114162	processed_pseudogene	Gm3785	ENSMUST00000221000	processed_pseudogene		13	1	65125878	202
ENSMUSG00000114138	antisense	Gm36423	ENSMUST00000222446	antisense		13	1	9684293	541
ENSMUSG00000114138	antisense	Gm36423	ENSMUST00000222421	antisense		13	1	9688843	481
ENSMUSG00000039046	protein_coding	Usp6nl	ENSMUST00000132391	processed_transcript		2	1	6322772	682
ENSMUSG00000057315	protein_coding	Arhgap24	ENSMUST00000070000	protein_coding		5	1	102845007	3632
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000169313	retained_intron		7	-1	31072289	469
ENSMUSG00000114583	processed_pseudogene	Gm48881	ENSMUST00000225592	processed_pseudogene		13	-1	97202975	729
ENSMUSG00000113650	TEC	Gm47826	ENSMUST00000221759	TEC		13	-1	9756879	3139
ENSMUSG00000039765	protein_coding	Cc2d2a	ENSMUST00000142303	retained_intron		5	1	43672289	1194
ENSMUSG00000117602	lincRNA	9130209A04Rik	ENSMUST00000235070	lincRNA		18	1	47452668	676
ENSMUSG00000029451	protein_coding	Gm13103	ENSMUST00000105768	protein_coding	alternative2	4	1	143846509	994
ENSMUSG00000090472	protein_coding	Gm3047	ENSMUST00000164069	protein_coding	principal5	14	1	4555405	822
ENSMUSG00000039765	protein_coding	Cc2d2a	ENSMUST00000125866	protein_coding		5	1	43672289	4512
ENSMUSG00000039046	protein_coding	Usp6nl	ENSMUST00000042503	protein_coding	principal4	2	1	6352733	4340
ENSMUSG00000057315	protein_coding	Arhgap24	ENSMUST00000073302	protein_coding		5	1	102481391	3151
ENSMUSG00000117602	lincRNA	9130209A04Rik	ENSMUST00000234865	lincRNA		18	1	47452695	913
ENSMUSG00000113885	antisense	Gm47802	ENSMUST00000221766	antisense		13	1	9733897	451
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000165465	retained_intron		7	-1	31071037	370
ENSMUSG00000090472	protein_coding	Gm3047	ENSMUST00000177998	protein_coding	alternative2	14	1	4555410	618
ENSMUSG00000099901	processed_pseudogene	Zbed4-ps2	ENSMUST00000187003	processed_pseudogene		7	1	13752831	3448
ENSMUSG00000029507	protein_coding	Pus1	ENSMUST00000170468	protein_coding	alternative2	5	-1	110780615	1510
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000156857	nonsense_mediated_decay		2	1	28641228	1711
ENSMUSG00000029599	protein_coding	Ddx54	ENSMUST00000202672	retained_intron		5	1	120613127	4302
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000165862	retained_intron		7	-1	31071459	520
ENSMUSG00000108692	unprocessed_pseudogene	Gm45034	ENSMUST00000206831	unprocessed_pseudogene		7	1	26738583	482
ENSMUSG00000097822	processed_transcript	Gm26655	ENSMUST00000181089	processed_transcript		14	-1	4585439	658
ENSMUSG00000020328	protein_coding	Nudcd2	ENSMUST00000020578	protein_coding	principal1	11	1	40733667	1577
ENSMUSG00000029599	protein_coding	Ddx54	ENSMUST00000201616	retained_intron		5	1	120618904	845
ENSMUSG00000039046	protein_coding	Usp6nl	ENSMUST00000150515	processed_transcript		2	1	6420922	704
ENSMUSG00000115221	unitary_pseudogene	Gm49121	ENSMUST00000227377	unitary_pseudogene		17	1	13911248	1235
ENSMUSG00000029599	protein_coding	Ddx54	ENSMUST00000201698	retained_intron		5	1	120621327	471
ENSMUSG00000114130	processed_pseudogene	Gm18954	ENSMUST00000222200	processed_pseudogene		12	-1	41020252	1792
ENSMUSG00000086401	antisense	Gm15559	ENSMUST00000132267	antisense		5	1	110770949	2260
ENSMUSG00000097822	processed_transcript	Gm26655	ENSMUST00000180615	processed_transcript		14	-1	4585419	570
ENSMUSG00000039765	protein_coding	Cc2d2a	ENSMUST00000127355	retained_intron		5	1	43696582	2774
ENSMUSG00000020328	protein_coding	Nudcd2	ENSMUST00000127057	processed_transcript		11	1	40733744	806
ENSMUSG00000097822	processed_transcript	Gm26655	ENSMUST00000181095	processed_transcript		14	-1	4585419	2078
ENSMUSG00000102195	lincRNA	Gm38168	ENSMUST00000191717	lincRNA		Y	1	19954018	1493
ENSMUSG00000097822	processed_transcript	Gm26655	ENSMUST00000181832	processed_transcript		14	-1	4585426	1186
ENSMUSG00000070811	protein_coding	Sult2a2	ENSMUST00000086148	protein_coding	principal1	7	1	13733505	741
ENSMUSG00000020328	protein_coding	Nudcd2	ENSMUST00000127382	protein_coding		11	1	40733946	727
ENSMUSG00000102195	lincRNA	Gm38168	ENSMUST00000194577	lincRNA		Y	1	19954472	612
ENSMUSG00000113007	processed_pseudogene	Gm8700	ENSMUST00000222187	processed_pseudogene		13	-1	50104045	3054
ENSMUSG00000102195	lincRNA	Gm38168	ENSMUST00000191798	lincRNA		Y	1	19954472	431
ENSMUSG00000040274	protein_coding	Cdk6	ENSMUST00000165117	protein_coding	principal1	5	1	3343893	11525
ENSMUSG00000020328	protein_coding	Nudcd2	ENSMUST00000141839	processed_transcript		11	1	40734205	577
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000165265	retained_intron		7	-1	31076655	883
ENSMUSG00000020328	protein_coding	Nudcd2	ENSMUST00000144601	processed_transcript		11	1	40736306	445
ENSMUSG00000039194	protein_coding	Rlbp1	ENSMUST00000179243	protein_coding	principal1	7	-1	79387048	2142
ENSMUSG00000116996	processed_pseudogene	Gm8128	ENSMUST00000231562	processed_pseudogene		16	1	23034032	493
ENSMUSG00000084310	processed_pseudogene	Gm11950	ENSMUST00000121615	processed_pseudogene		11	1	3628824	838
ENSMUSG00000040274	protein_coding	Cdk6	ENSMUST00000197385	protein_coding		5	1	3343916	697
ENSMUSG00000040274	protein_coding	Cdk6	ENSMUST00000199396	retained_intron		5	1	3470949	2232
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000072331	protein_coding		7	-1	31076669	439
ENSMUSG00000100655	unprocessed_pseudogene	Gm21462	ENSMUST00000186803	unprocessed_pseudogene		Y	-1	86870055	696
ENSMUSG00000095941	protein_coding	Tle7	ENSMUST00000213641	protein_coding	alternative2	8	1	110101207	1649
ENSMUSG00000079889	processed_pseudogene	Gm11951	ENSMUST00000116005	processed_pseudogene		11	-1	3633442	431
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000186839	retained_intron		7	-1	31072051	1513
ENSMUSG00000067941	protein_coding	Gm7168	ENSMUST00000088809	protein_coding	principal1	17	1	13948373	1603
ENSMUSG00000040274	protein_coding	Cdk6	ENSMUST00000042410	protein_coding	principal1	5	1	3344312	2470
ENSMUSG00000095941	protein_coding	Tle7	ENSMUST00000219454	protein_coding	principal5	8	1	110108792	1513
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000171359	protein_coding		7	-1	31074952	342
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000037383	protein_coding	principal1	12	1	8208107	2737
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000169424	retained_intron		7	-1	31076654	680
ENSMUSG00000106588	antisense	Gm17590	ENSMUST00000197881	antisense		5	-1	3480873	1232
ENSMUSG00000042940	lincRNA	9230106D20Rik	ENSMUST00000216922	lincRNA		10	1	19644750	1407
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000186929	retained_intron		7	-1	31076645	141
ENSMUSG00000095941	protein_coding	Tle7	ENSMUST00000178785	protein_coding		8	1	110109772	936
ENSMUSG00000080891	polymorphic_pseudogene	Olfr587-ps1	ENSMUST00000118378	polymorphic_pseudogene		7	1	103134376	948
ENSMUSG00000106588	antisense	Gm17590	ENSMUST00000168422	antisense		5	-1	3473178	108
ENSMUSG00000101307	protein_coding	Gm7356	ENSMUST00000189454	protein_coding	principal1	17	-1	14003704	2217
ENSMUSG00000104506	lincRNA	Gm37740	ENSMUST00000193523	lincRNA		Y	1	19983060	437
ENSMUSG00000080891	polymorphic_pseudogene	Olfr587-ps1	ENSMUST00000209201	protein_coding	principal1	7	1	103134766	477
ENSMUSG00000105534	antisense	Gm42435	ENSMUST00000196630	antisense		5	-1	3500072	1448
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000218883	protein_coding		12	1	8208134	687
ENSMUSG00000042940	lincRNA	9230106D20Rik	ENSMUST00000052806	lincRNA		10	1	19644750	1406
ENSMUSG00000057092	protein_coding	Fxyd3	ENSMUST00000170456	retained_intron		7	-1	31076663	660
ENSMUSG00000025939	protein_coding	Ube2w	ENSMUST00000182554	protein_coding		1	-1	16619312	1508
ENSMUSG00000044676	protein_coding	Zfp612	ENSMUST00000213084	retained_intron		8	1	110079746	1413
ENSMUSG00000112299	processed_pseudogene	Gm17870	ENSMUST00000219489	processed_pseudogene		10	1	99988621	1174
ENSMUSG00000116637	processed_pseudogene	Gm8130	ENSMUST00000231857	processed_pseudogene		16	1	23050282	570
ENSMUSG00000104506	lincRNA	Gm37740	ENSMUST00000194757	lincRNA		Y	1	19983060	621
ENSMUSG00000111242	processed_pseudogene	Gm8155	ENSMUST00000216363	processed_pseudogene		10	-1	3141058	1612
ENSMUSG00000111625	processed_pseudogene	Gm48097	ENSMUST00000213719	processed_pseudogene		10	1	3176020	169
ENSMUSG00000071102	processed_pseudogene	Gm10313	ENSMUST00000095320	processed_pseudogene		8	-1	46255678	1002
ENSMUSG00000082714	processed_pseudogene	Gm15120	ENSMUST00000120602	processed_pseudogene		7	1	103135743	301
ENSMUSG00000025939	protein_coding	Ube2w	ENSMUST00000182080	processed_transcript		1	-1	16585398	411
ENSMUSG00000108105	processed_pseudogene	Gm5340	ENSMUST00000203733	processed_pseudogene		7	-1	3285474	880
ENSMUSG00000028527	protein_coding	Ak4	ENSMUST00000102780	protein_coding	principal1	4	1	101419277	4186
ENSMUSG00000110787	unprocessed_pseudogene	Gm6667	ENSMUST00000217169	unprocessed_pseudogene		10	-1	3235033	564
ENSMUSG00000109692	processed_pseudogene	Gm8575	ENSMUST00000210262	processed_pseudogene		8	1	46279672	521
ENSMUSG00000084262	protein_coding	Olfr588-ps1	ENSMUST00000118682	protein_coding	principal1	7	1	103140879	4607
ENSMUSG00000030336	protein_coding	Cd27	ENSMUST00000032486	protein_coding	principal1	6	-1	125237010	1559
ENSMUSG00000084262	protein_coding	Olfr588-ps1	ENSMUST00000210115	protein_coding		7	1	103143590	912
ENSMUSG00000096833	IG_V_gene	Igkv4-55	ENSMUST00000103359	IG_V_gene	principal1	6	-1	69607828	379
ENSMUSG00000028527	protein_coding	Ak4	ENSMUST00000106946	protein_coding	principal1	4	1	101419289	4360
ENSMUSG00000083254	processed_pseudogene	Gm15116	ENSMUST00000122248	processed_pseudogene		7	-1	103148660	663
ENSMUSG00000039194	protein_coding	Rlbp1	ENSMUST00000053718	protein_coding	principal1	7	-1	79386959	2134
ENSMUSG00000106213	IG_V_pseudogene	Igkv13-55-1	ENSMUST00000200400	IG_V_pseudogene		6	1	69599887	308
ENSMUSG00000091618	protein_coding	H60c	ENSMUST00000214645	processed_transcript		10	-1	3267771	2383
ENSMUSG00000044676	protein_coding	Zfp612	ENSMUST00000212754	protein_coding	principal1	8	1	110079762	4863
ENSMUSG00000030336	protein_coding	Cd27	ENSMUST00000112281	protein_coding		6	-1	125236994	832
ENSMUSG00000062962	processed_pseudogene	Gm6378	ENSMUST00000084199	processed_pseudogene		18	-1	21077109	442
ENSMUSG00000070583	protein_coding	Fv1	ENSMUST00000094481	protein_coding	principal1	4	1	147868979	1380
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000218305	nonsense_mediated_decay		12	1	8208136	1587
ENSMUSG00000028527	protein_coding	Ak4	ENSMUST00000106945	protein_coding	principal1	4	1	101419319	4175
ENSMUSG00000105301	IG_V_pseudogene	Igkv13-54-1	ENSMUST00000196495	IG_V_pseudogene		6	1	69617048	303
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000219043	nonsense_mediated_decay		12	1	8208138	985
ENSMUSG00000025939	protein_coding	Ube2w	ENSMUST00000117146	protein_coding	principal1	1	-1	16619489	2181
ENSMUSG00000028527	protein_coding	Ak4	ENSMUST00000131397	protein_coding		4	1	101419706	462
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000218086	protein_coding		12	1	8208145	1159
ENSMUSG00000039194	protein_coding	Rlbp1	ENSMUST00000206624	retained_intron		7	-1	79377703	779
ENSMUSG00000028527	protein_coding	Ak4	ENSMUST00000133055	protein_coding		4	1	101419733	458
ENSMUSG00000025939	protein_coding	Ube2w	ENSMUST00000133639	nonsense_mediated_decay		1	-1	16619259	493
ENSMUSG00000091618	protein_coding	H60c	ENSMUST00000216211	protein_coding	alternative2	10	-1	3267750	1074
ENSMUSG00000044676	protein_coding	Zfp612	ENSMUST00000058804	protein_coding		8	1	110079764	3180
ENSMUSG00000030336	protein_coding	Cd27	ENSMUST00000112282	protein_coding		6	-1	125236953	588
ENSMUSG00000100018	processed_pseudogene	Gm7776	ENSMUST00000191211	processed_pseudogene		1	-1	91172148	720
ENSMUSG00000039194	protein_coding	Rlbp1	ENSMUST00000206162	protein_coding		7	-1	79384112	955
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000169104	protein_coding		12	1	8208147	2626
ENSMUSG00000091618	protein_coding	H60c	ENSMUST00000170893	protein_coding	principal2	10	-1	3267771	2817
ENSMUSG00000028527	protein_coding	Ak4	ENSMUST00000151561	processed_transcript		4	1	101420497	791
ENSMUSG00000039194	protein_coding	Rlbp1	ENSMUST00000206320	protein_coding		7	-1	79386541	817
ENSMUSG00000045312	protein_coding	Lhfpl2	ENSMUST00000054274	protein_coding	principal1	13	1	94057796	4348
ENSMUSG00000102510	unprocessed_pseudogene	Olfr1398-ps1	ENSMUST00000193866	unprocessed_pseudogene		3	-1	52246945	929
ENSMUSG00000039194	protein_coding	Rlbp1	ENSMUST00000205442	protein_coding		7	-1	79386605	634
ENSMUSG00000030336	protein_coding	Cd27	ENSMUST00000135205	retained_intron		6	-1	125234816	569
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000220345	nonsense_mediated_decay		12	1	8208149	467
ENSMUSG00000028527	protein_coding	Ak4	ENSMUST00000155749	protein_coding		4	1	101447223	537
ENSMUSG00000117547	processed_pseudogene	Gm50072	ENSMUST00000234132	processed_pseudogene		18	1	3015908	252
ENSMUSG00000025939	protein_coding	Ube2w	ENSMUST00000136455	retained_intron		1	-1	16619284	1517
ENSMUSG00000106435	processed_pseudogene	Gm3103	ENSMUST00000198073	processed_pseudogene		5	1	137888071	752
ENSMUSG00000030336	protein_coding	Cd27	ENSMUST00000151527	retained_intron		6	-1	125234676	491
ENSMUSG00000045312	protein_coding	Lhfpl2	ENSMUST00000144838	retained_intron		13	1	94057832	3273
ENSMUSG00000039194	protein_coding	Rlbp1	ENSMUST00000205638	protein_coding		7	-1	79386474	458
ENSMUSG00000024313	protein_coding	Mep1b	ENSMUST00000234367	protein_coding		18	1	21061923	617
ENSMUSG00000025939	protein_coding	Ube2w	ENSMUST00000132919	retained_intron		1	-1	16619284	423
ENSMUSG00000113921	processed_pseudogene	Gm48054	ENSMUST00000223015	processed_pseudogene		13	-1	50134510	841
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000217763	retained_intron		12	1	8208150	3496
ENSMUSG00000115820	lincRNA	Gm41311	ENSMUST00000226247	lincRNA		15	1	40343260	727
ENSMUSG00000045312	protein_coding	Lhfpl2	ENSMUST00000156071	protein_coding		13	1	94083511	768
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000217999	protein_coding		12	1	8208150	683
ENSMUSG00000030336	protein_coding	Cd27	ENSMUST00000152650	retained_intron		6	-1	125237003	744
ENSMUSG00000093774	unprocessed_pseudogene	Vmn1r-ps151	ENSMUST00000176956	unprocessed_pseudogene		18	-1	3027882	982
ENSMUSG00000102457	TEC	Gm38342	ENSMUST00000195710	TEC		1	1	16618560	2980
ENSMUSG00000045312	protein_coding	Lhfpl2	ENSMUST00000221096	protein_coding		13	1	94094461	362
ENSMUSG00000111114	processed_pseudogene	Gm18703	ENSMUST00000215318	processed_pseudogene		10	1	3303049	333
ENSMUSG00000039194	protein_coding	Rlbp1	ENSMUST00000206695	protein_coding		7	-1	79386912	450
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000219357	nonsense_mediated_decay		12	1	8208169	616
ENSMUSG00000105160	TEC	A530030E21Rik	ENSMUST00000199551	TEC		16	1	19243525	1310
ENSMUSG00000045312	protein_coding	Lhfpl2	ENSMUST00000223423	protein_coding		13	1	94117942	771
ENSMUSG00000056332	lincRNA	Gm16294	ENSMUST00000070382	lincRNA		15	-1	40527277	1459
ENSMUSG00000024313	protein_coding	Mep1b	ENSMUST00000235102	processed_transcript		18	1	21072344	443
ENSMUSG00000047171	protein_coding	Helt	ENSMUST00000058636	protein_coding	principal1	8	-1	46294671	1541
ENSMUSG00000108426	protein_coding	Olfr465-ps1	ENSMUST00000206324	protein_coding	principal1	13	1	65138089	2234
ENSMUSG00000091764	protein_coding	Zfp964	ENSMUST00000204062	retained_intron		8	1	69654479	3561
ENSMUSG00000115069	processed_pseudogene	Gm7382	ENSMUST00000226476	processed_pseudogene		15	1	40537321	1105
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000219058	nonsense_mediated_decay		12	1	8208172	1402
ENSMUSG00000113227	lincRNA	4933433N18Rik	ENSMUST00000222134	lincRNA		13	1	50137069	1220
ENSMUSG00000045312	protein_coding	Lhfpl2	ENSMUST00000120051	protein_coding		13	1	94134740	488
ENSMUSG00000097476	lincRNA	Gm26583	ENSMUST00000181436	lincRNA		12	-1	112950512	3684
ENSMUSG00000030188	protein_coding	Magohb	ENSMUST00000032307	protein_coding	principal1	6	-1	131293244	767
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000220274	protein_coding		12	1	8208193	543
ENSMUSG00000047171	protein_coding	Helt	ENSMUST00000210652	protein_coding		8	-1	46293989	1282
ENSMUSG00000045312	protein_coding	Lhfpl2	ENSMUST00000118195	protein_coding	principal1	13	1	94172810	3611
ENSMUSG00000116703	processed_pseudogene	Gm46540	ENSMUST00000231540	processed_pseudogene		16	1	16932861	235
ENSMUSG00000047171	protein_coding	Helt	ENSMUST00000210696	retained_intron		8	-1	46293335	454
ENSMUSG00000091764	protein_coding	Zfp964	ENSMUST00000204285	protein_coding	principal1	8	1	69654492	4333
ENSMUSG00000004069	protein_coding	Dnaja3	ENSMUST00000060067	protein_coding	principal3	16	1	4684070	2648
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000217872	protein_coding		12	1	8268363	652
ENSMUSG00000045312	protein_coding	Lhfpl2	ENSMUST00000131595	processed_transcript		13	1	94173774	347
ENSMUSG00000091764	protein_coding	Zfp964	ENSMUST00000169125	protein_coding		8	1	69659263	1416
ENSMUSG00000045312	protein_coding	Lhfpl2	ENSMUST00000121618	protein_coding	principal1	13	1	94173992	4209
ENSMUSG00000030188	protein_coding	Magohb	ENSMUST00000174488	retained_intron		6	-1	131285873	447
ENSMUSG00000116598	processed_pseudogene	Gm6438	ENSMUST00000232160	processed_pseudogene		16	1	16968609	460
ENSMUSG00000041773	protein_coding	Enc1	ENSMUST00000041623	protein_coding	principal1	13	1	97241105	4737
ENSMUSG00000037669	protein_coding	Ldah	ENSMUST00000219532	protein_coding		12	1	8268420	359
ENSMUSG00000038803	protein_coding	Ost4	ENSMUST00000132253	protein_coding	principal1	5	-1	30907788	1144
ENSMUSG00000100701	processed_pseudogene	Gm19587	ENSMUST00000191395	processed_pseudogene		1	1	43888051	545
ENSMUSG00000112694	antisense	Gm33037	ENSMUST00000217927	antisense		12	-1	8209165	642
ENSMUSG00000087319	lincRNA	Gm15907	ENSMUST00000134284	lincRNA		13	-1	94140117	2309
ENSMUSG00000110179	lincRNA	Gm39168	ENSMUST00000210181	lincRNA		8	1	46299131	1423
ENSMUSG00000107067	processed_pseudogene	Gm42581	ENSMUST00000201774	processed_pseudogene		6	1	19788053	966
ENSMUSG00000101395	processed_pseudogene	Gm8241	ENSMUST00000189286	processed_pseudogene		1	1	43898294	816
ENSMUSG00000030823	protein_coding	9130019O22Rik	ENSMUST00000049052	protein_coding	principal1	7	-1	127387166	3878
ENSMUSG00000030188	protein_coding	Magohb	ENSMUST00000172883	nonsense_mediated_decay		6	-1	131293131	460
ENSMUSG00000109743	TEC	Gm45255	ENSMUST00000209943	TEC		8	1	46313801	811
ENSMUSG00000004069	protein_coding	Dnaja3	ENSMUST00000115854	protein_coding	alternative1	16	1	4684096	2505
ENSMUSG00000030188	protein_coding	Magohb	ENSMUST00000173837	protein_coding		6	-1	131292260	897
ENSMUSG00000038803	protein_coding	Ost4	ENSMUST00000132034	protein_coding	principal1	5	-1	30907725	576
ENSMUSG00000030823	protein_coding	9130019O22Rik	ENSMUST00000164345	protein_coding		7	-1	127387113	2735
ENSMUSG00000035242	protein_coding	Oaz1	ENSMUST00000179894	retained_intron		10	1	80826682	2526
ENSMUSG00000099916	lincRNA	Gm28318	ENSMUST00000190347	lincRNA		Y	1	51280595	1499
ENSMUSG00000024313	protein_coding	Mep1b	ENSMUST00000082235	protein_coding	principal1	18	1	21072344	2286
ENSMUSG00000004069	protein_coding	Dnaja3	ENSMUST00000138495	retained_intron		16	1	4684114	1483
ENSMUSG00000030188	protein_coding	Magohb	ENSMUST00000174781	retained_intron		6	-1	131289676	546
ENSMUSG00000004069	protein_coding	Dnaja3	ENSMUST00000229529	protein_coding		16	1	4684115	1433
ENSMUSG00000019834	protein_coding	Slc22a16	ENSMUST00000078314	protein_coding	principal2	10	1	40570336	2269
ENSMUSG00000029073	protein_coding	Cptp	ENSMUST00000030950	protein_coding	principal1	4	-1	155869440	2662
ENSMUSG00000101670	unprocessed_pseudogene	Gm21470	ENSMUST00000187680	unprocessed_pseudogene		Y	-1	86944319	696
ENSMUSG00000012889	protein_coding	Podnl1	ENSMUST00000093380	protein_coding	principal1	8	1	84125989	2090
ENSMUSG00000099916	lincRNA	Gm28318	ENSMUST00000189558	lincRNA		Y	1	51281048	622
ENSMUSG00000099916	lincRNA	Gm28318	ENSMUST00000187988	lincRNA		Y	1	51281048	438
ENSMUSG00000030188	protein_coding	Magohb	ENSMUST00000173198	nonsense_mediated_decay		6	-1	131293151	561
ENSMUSG00000019834	protein_coding	Slc22a16	ENSMUST00000019978	protein_coding	alternative2	10	1	40570613	2226
ENSMUSG00000102844	TEC	Gm38034	ENSMUST00000193915	TEC		3	1	52282241	2069
ENSMUSG00000061104	protein_coding	Sap18b	ENSMUST00000074053	protein_coding	principal1	8	1	95825346	789
ENSMUSG00000012520	protein_coding	Phox2b	ENSMUST00000012664	protein_coding	principal1	5	-1	67099301	3013
ENSMUSG00000045795	protein_coding	Whamm	ENSMUST00000207123	nonsense_mediated_decay		7	1	81571266	1563
ENSMUSG00000030188	protein_coding	Magohb	ENSMUST00000173332	nonsense_mediated_decay		6	-1	131293151	395
ENSMUSG00000106763	processed_pseudogene	Gm19102	ENSMUST00000201133	processed_pseudogene		6	-1	20970990	553
ENSMUSG00000090966	protein_coding	Vmn2r116	ENSMUST00000164856	protein_coding	principal1	17	1	23384604	5328
ENSMUSG00000092405	antisense	Gm20402	ENSMUST00000174738	antisense		3	-1	52269435	687
ENSMUSG00000012889	protein_coding	Podnl1	ENSMUST00000147175	retained_intron		8	1	84127818	3011
ENSMUSG00000083813	processed_pseudogene	Gm15502	ENSMUST00000121449	processed_pseudogene		5	-1	137896959	208
ENSMUSG00000029073	protein_coding	Cptp	ENSMUST00000156266	processed_transcript		4	-1	155869362	462
ENSMUSG00000020988	protein_coding	L2hgdh	ENSMUST00000021370	protein_coding	principal1	12	-1	69724873	3340
ENSMUSG00000118180	lincRNA	Gm50223	ENSMUST00000236646	lincRNA		18	1	47477504	1838
ENSMUSG00000107658	processed_pseudogene	Gm44958	ENSMUST00000203734	processed_pseudogene		6	-1	131292338	736
ENSMUSG00000090966	protein_coding	Vmn2r116	ENSMUST00000234010	protein_coding		17	1	23384604	5100
ENSMUSG00000029073	protein_coding	Cptp	ENSMUST00000151961	protein_coding		4	-1	155868818	792
ENSMUSG00000012520	protein_coding	Phox2b	ENSMUST00000174251	protein_coding		5	-1	67099057	1177
ENSMUSG00000090966	protein_coding	Vmn2r116	ENSMUST00000234193	retained_intron		17	1	23384604	6240
ENSMUSG00000110661	lincRNA	Gm31805	ENSMUST00000211921	lincRNA		8	-1	95833675	4031
ENSMUSG00000090966	protein_coding	Vmn2r116	ENSMUST00000234055	nonsense_mediated_decay		17	1	23384604	5039
ENSMUSG00000114186	lincRNA	Gm48681	ENSMUST00000223043	lincRNA		12	-1	119567251	2263
ENSMUSG00000090966	protein_coding	Vmn2r116	ENSMUST00000235122	retained_intron		17	1	23384604	6672
ENSMUSG00000097180	lincRNA	2700038G22Rik	ENSMUST00000181574	lincRNA		5	1	23850597	1375
ENSMUSG00000106995	TEC	Gm33167	ENSMUST00000201933	TEC		5	1	67127503	2643
ENSMUSG00000097180	lincRNA	2700038G22Rik	ENSMUST00000197551	lincRNA		5	1	23850601	318
ENSMUSG00000101631	unprocessed_pseudogene	Gm20884	ENSMUST00000186946	unprocessed_pseudogene		Y	-1	51391845	693
ENSMUSG00000090966	protein_coding	Vmn2r116	ENSMUST00000234564	protein_coding		17	1	23384604	5208
ENSMUSG00000020988	protein_coding	L2hgdh	ENSMUST00000222972	retained_intron		12	-1	69722187	503
ENSMUSG00000113091	processed_pseudogene	Gm9279	ENSMUST00000223175	processed_pseudogene		12	1	119609918	1606
ENSMUSG00000090966	protein_coding	Vmn2r116	ENSMUST00000234839	nonsense_mediated_decay		17	1	23384604	5218
ENSMUSG00000090966	protein_coding	Vmn2r116	ENSMUST00000234872	nonsense_mediated_decay		17	1	23384604	5610
ENSMUSG00000100773	unprocessed_pseudogene	Gm28366	ENSMUST00000190147	unprocessed_pseudogene		Y	-1	86976575	615
ENSMUSG00000099613	lincRNA	Gm28313	ENSMUST00000191411	lincRNA		Y	1	51408969	397
ENSMUSG00000020988	protein_coding	L2hgdh	ENSMUST00000223387	nonsense_mediated_decay		12	-1	69724773	438
ENSMUSG00000114137	unprocessed_pseudogene	Gm48685	ENSMUST00000222158	unprocessed_pseudogene		12	-1	119876642	171
ENSMUSG00000068566	protein_coding	Myadm	ENSMUST00000203328	protein_coding	principal1	7	1	3289080	1899
ENSMUSG00000049498	protein_coding	Olfr1449	ENSMUST00000215325	protein_coding	principal1	19	1	12930867	1149
ENSMUSG00000101557	unprocessed_pseudogene	Gm28314	ENSMUST00000191276	unprocessed_pseudogene		Y	-1	51421988	345
ENSMUSG00000112946	unprocessed_pseudogene	Gm9280	ENSMUST00000223155	unprocessed_pseudogene		12	1	119876653	517
ENSMUSG00000113910	sense_overlapping	Gm48286	ENSMUST00000220971	sense_overlapping		12	1	111616870	644
ENSMUSG00000101829	unprocessed_pseudogene	Gm21752	ENSMUST00000191023	unprocessed_pseudogene		Y	-1	87013463	696
ENSMUSG00000049498	protein_coding	Olfr1449	ENSMUST00000214079	protein_coding	principal1	19	1	12930840	1304
ENSMUSG00000083007	processed_pseudogene	Gm13623	ENSMUST00000118359	processed_pseudogene		2	1	69766182	625
ENSMUSG00000113460	TEC	Gm48686	ENSMUST00000222016	TEC		12	1	119911047	1922
ENSMUSG00000068566	protein_coding	Myadm	ENSMUST00000096744	protein_coding	principal1	7	1	3290534	2814
ENSMUSG00000118576	unprocessed_pseudogene	AC117663.1	ENSMUST00000239129	unprocessed_pseudogene		5	-1	23876443	749
ENSMUSG00000107004	processed_pseudogene	Gm42657	ENSMUST00000201746	processed_pseudogene		5	1	120641621	211
ENSMUSG00000101222	lincRNA	Gm28315	ENSMUST00000189948	lincRNA		Y	-1	51463433	2168
ENSMUSG00000049498	protein_coding	Olfr1449	ENSMUST00000208624	protein_coding	principal1	19	1	12930845	1296
ENSMUSG00000044167	protein_coding	Foxo1	ENSMUST00000053764	protein_coding	principal1	3	1	52268336	8665
ENSMUSG00000099496	lincRNA	Gm28365	ENSMUST00000189584	lincRNA		Y	1	87054717	1498
ENSMUSG00000099496	lincRNA	Gm28365	ENSMUST00000188055	lincRNA		Y	1	87055169	438
ENSMUSG00000049498	protein_coding	Olfr1449	ENSMUST00000056005	protein_coding	principal1	19	1	12934737	948
ENSMUSG00000118017	lincRNA	Gm29966	ENSMUST00000235304	lincRNA		18	1	65244287	7350
ENSMUSG00000109445	TEC	4930560O18Rik	ENSMUST00000207051	TEC		7	-1	120103205	1595
ENSMUSG00000118017	lincRNA	Gm29966	ENSMUST00000235231	lincRNA		18	1	65244299	1132
ENSMUSG00000068566	protein_coding	Myadm	ENSMUST00000203566	protein_coding	principal1	7	1	3290575	4028
ENSMUSG00000100787	lincRNA	Gm28316	ENSMUST00000187576	lincRNA		Y	1	51495432	1500
ENSMUSG00000113437	unprocessed_pseudogene	Gm47412	ENSMUST00000222880	unprocessed_pseudogene		13	-1	50167849	309
ENSMUSG00000068566	protein_coding	Myadm	ENSMUST00000204541	protein_coding		7	1	3291490	391
ENSMUSG00000068566	protein_coding	Myadm	ENSMUST00000164553	protein_coding	principal1	7	1	3293094	2799
ENSMUSG00000100787	lincRNA	Gm28316	ENSMUST00000188379	lincRNA		Y	1	51495887	617
ENSMUSG00000035242	protein_coding	Oaz1	ENSMUST00000177850	protein_coding		10	1	80826683	708
ENSMUSG00000100787	lincRNA	Gm28316	ENSMUST00000188841	lincRNA		Y	1	51495887	433
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000117624	protein_coding		8	-1	124721964	2970
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000231984	protein_coding		8	-1	124721968	2905
ENSMUSG00000078816	protein_coding	Prkcg	ENSMUST00000203600	processed_transcript		7	1	3289179	350
ENSMUSG00000002409	protein_coding	Dyrk1b	ENSMUST00000085901	protein_coding	principal1	7	1	28179469	2534
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000101153	protein_coding	principal1	6	-1	90716529	8036
ENSMUSG00000058407	protein_coding	Txndc9	ENSMUST00000162031	protein_coding	principal2	1	-1	37997315	3381
ENSMUSG00000085327	antisense	Gm16104	ENSMUST00000156260	antisense		10	1	81409575	401
ENSMUSG00000002409	protein_coding	Dyrk1b	ENSMUST00000172761	protein_coding		7	1	28179494	2018
ENSMUSG00000106826	TEC	Gm42583	ENSMUST00000202678	TEC		6	1	21258921	6700
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000204983	retained_intron		6	-1	90662288	2691
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000212100	protein_coding		6	-1	90988685	3500
ENSMUSG00000035242	protein_coding	Oaz1	ENSMUST00000180036	protein_coding	principal2	10	1	80826686	1044
ENSMUSG00000002409	protein_coding	Dyrk1b	ENSMUST00000172467	protein_coding		7	1	28180266	2523
ENSMUSG00000019320	protein_coding	Noxo1	ENSMUST00000019464	protein_coding	principal1	17	1	24696234	2238
ENSMUSG00000026234	protein_coding	Ncl	ENSMUST00000027438	protein_coding	principal1	1	-1	86359400	8202
ENSMUSG00000058407	protein_coding	Txndc9	ENSMUST00000193832	protein_coding	alternative2	1	-1	37997243	3472
ENSMUSG00000035242	protein_coding	Oaz1	ENSMUST00000179172	protein_coding		10	1	80826693	744
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000154198	processed_transcript		6	-1	90668651	566
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000214828	protein_coding	principal5	8	-1	124721978	3301
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000141434	processed_transcript		6	-1	90667999	244
ENSMUSG00000025821	protein_coding	Zfp282	ENSMUST00000061890	protein_coding	principal1	6	1	47877204	5573
ENSMUSG00000019320	protein_coding	Noxo1	ENSMUST00000126342	processed_transcript		17	1	24698025	215
ENSMUSG00000035242	protein_coding	Oaz1	ENSMUST00000179620	protein_coding		10	1	80827712	538
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000238821	protein_coding		6	-1	90781972	2439
ENSMUSG00000058407	protein_coding	Txndc9	ENSMUST00000195247	protein_coding	principal2	1	-1	37997893	1699
ENSMUSG00000035242	protein_coding	Oaz1	ENSMUST00000179341	protein_coding		10	1	80828593	520
ENSMUSG00000035557	protein_coding	Krt17	ENSMUST00000080893	protein_coding	principal1	11	-1	100261029	1551
ENSMUSG00000025821	protein_coding	Zfp282	ENSMUST00000125957	retained_intron		6	1	47877656	2938
ENSMUSG00000063388	processed_pseudogene	BC023105	ENSMUST00000073997	processed_pseudogene		18	1	60441765	1216
ENSMUSG00000078798	protein_coding	Sult2a1	ENSMUST00000108522	protein_coding	principal1	7	-1	13837409	1020
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000205068	processed_transcript		6	-1	90694696	469
ENSMUSG00000058407	protein_coding	Txndc9	ENSMUST00000194747	retained_intron		1	-1	37997224	2605
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000156834	protein_coding		6	-1	90764141	974
ENSMUSG00000100660	processed_pseudogene	Kat6b-ps2	ENSMUST00000188339	processed_pseudogene		7	-1	13815042	1600
ENSMUSG00000070883	protein_coding	Ccdc173	ENSMUST00000094942	protein_coding	principal1	2	-1	69789575	1844
ENSMUSG00000035242	protein_coding	Oaz1	ENSMUST00000060987	protein_coding	alternative1	10	1	80826656	1071
ENSMUSG00000026234	protein_coding	Ncl	ENSMUST00000185676	retained_intron		1	-1	86359364	3072
ENSMUSG00000058407	protein_coding	Txndc9	ENSMUST00000192960	protein_coding		1	-1	37995845	472
ENSMUSG00000114861	processed_pseudogene	Gm47991	ENSMUST00000225541	processed_pseudogene		13	1	38332572	367
ENSMUSG00000118259	lincRNA	Gm5095	ENSMUST00000236621	lincRNA		18	1	47537735	1523
ENSMUSG00000026944	protein_coding	Abca2	ENSMUST00000102919	protein_coding	principal1	2	1	25428703	8033
ENSMUSG00000103454	processed_pseudogene	Gm38098	ENSMUST00000194115	processed_pseudogene		3	1	52425408	241
ENSMUSG00000026234	protein_coding	Ncl	ENSMUST00000188682	retained_intron		1	-1	86351211	601
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000133492	processed_transcript		6	-1	90736687	568
ENSMUSG00000070883	protein_coding	Ccdc173	ENSMUST00000148190	processed_transcript		2	-1	69781988	952
ENSMUSG00000114525	lincRNA	Gm47990	ENSMUST00000225912	lincRNA		13	1	38320526	333
ENSMUSG00000026234	protein_coding	Ncl	ENSMUST00000186050	retained_intron		1	-1	86352063	1054
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000041614	protein_coding		8	-1	124721972	3038
ENSMUSG00000060882	protein_coding	Kcnd2	ENSMUST00000081542	protein_coding	principal1	6	1	21215503	5152
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000146977	processed_transcript		6	-1	90757550	354
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000028155	protein_coding	principal3	2	1	28641237	7674
ENSMUSG00000102349	TEC	Gm37376	ENSMUST00000192176	TEC		19	1	5801941	453
ENSMUSG00000058407	protein_coding	Txndc9	ENSMUST00000195032	protein_coding	principal2	1	-1	37997616	1444
ENSMUSG00000026387	protein_coding	Sctr	ENSMUST00000072886	protein_coding	principal3	1	1	120006894	2012
ENSMUSG00000103965	lincRNA	Gm30173	ENSMUST00000195035	lincRNA		3	1	52516964	1128
ENSMUSG00000026234	protein_coding	Ncl	ENSMUST00000189504	retained_intron		1	-1	86352306	502
ENSMUSG00000019320	protein_coding	Noxo1	ENSMUST00000141095	processed_transcript		17	1	24698178	702
ENSMUSG00000076940	IG_V_gene	Iglv2	ENSMUST00000197518	IG_V_gene	principal5	16	-1	19260859	366
ENSMUSG00000026944	protein_coding	Abca2	ENSMUST00000150550	processed_transcript		2	1	25441308	759
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000238855	retained_intron		6	-1	90782081	4340
ENSMUSG00000045795	protein_coding	Whamm	ENSMUST00000165460	protein_coding	principal1	7	1	81571292	3069
ENSMUSG00000058407	protein_coding	Txndc9	ENSMUST00000192237	protein_coding		1	-1	37996658	698
ENSMUSG00000029727	protein_coding	Cyp3a13	ENSMUST00000031741	protein_coding	principal1	5	-1	137921619	2956
ENSMUSG00000092341	lincRNA	Malat1	ENSMUST00000172812	lincRNA		19	-1	5802672	6983
ENSMUSG00000019320	protein_coding	Noxo1	ENSMUST00000123026	retained_intron		17	1	24698235	1568
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000118134	protein_coding	alternative2	8	-1	124721983	3148
ENSMUSG00000106855	TEC	5330437M03Rik	ENSMUST00000201318	TEC		6	1	21681301	4083
ENSMUSG00000026387	protein_coding	Sctr	ENSMUST00000189037	protein_coding	alternative2	1	1	120007034	1819
ENSMUSG00000092341	lincRNA	Malat1	ENSMUST00000173314	lincRNA		19	-1	5797464	556
ENSMUSG00000058407	protein_coding	Txndc9	ENSMUST00000194692	retained_intron		1	-1	37997262	1348
ENSMUSG00000062892	protein_coding	Olfr1450	ENSMUST00000213587	protein_coding	principal1	19	1	12952865	2872
ENSMUSG00000026944	protein_coding	Abca2	ENSMUST00000143075	processed_transcript		2	1	25442948	519
ENSMUSG00000030917	protein_coding	Tmem159	ENSMUST00000033210	protein_coding	principal1	7	1	120102353	1484
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000126674	retained_intron		8	-1	124674220	644
ENSMUSG00000053801	protein_coding	Grwd1	ENSMUST00000131384	protein_coding	principal1	7	-1	45830944	1974
ENSMUSG00000026234	protein_coding	Ncl	ENSMUST00000185785	protein_coding		1	-1	86358969	661
ENSMUSG00000107097	processed_pseudogene	Gm42584	ENSMUST00000201404	processed_pseudogene		6	1	21491661	220
ENSMUSG00000076940	IG_V_gene	Iglv2	ENSMUST00000103752	IG_V_gene	alternative2	16	-1	19260844	348
ENSMUSG00000034312	protein_coding	Iqsec1	ENSMUST00000101151	protein_coding		6	-1	90810123	6490
ENSMUSG00000092341	lincRNA	Malat1	ENSMUST00000174808	lincRNA		19	-1	5796952	656
ENSMUSG00000062892	protein_coding	Olfr1450	ENSMUST00000213925	protein_coding	principal1	19	1	12950258	3075
ENSMUSG00000101361	protein_coding	Gm7358	ENSMUST00000186636	protein_coding	principal1	17	-1	14059531	1603
ENSMUSG00000092341	lincRNA	Malat1	ENSMUST00000173499	lincRNA		19	-1	5802671	485
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000133565	nonsense_mediated_decay		2	1	28641241	5103
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000130344	retained_intron		8	-1	124675502	769
ENSMUSG00000062892	protein_coding	Olfr1450	ENSMUST00000082006	protein_coding	principal1	19	1	12953591	978
ENSMUSG00000045795	protein_coding	Whamm	ENSMUST00000209044	protein_coding		7	1	81571944	1879
ENSMUSG00000102677	lincRNA	4930535E02Rik	ENSMUST00000194463	lincRNA		3	-1	68761433	655
ENSMUSG00000099662	processed_pseudogene	Ppp1r2-ps2	ENSMUST00000117103	processed_pseudogene		6	1	90905819	635
ENSMUSG00000100098	unprocessed_pseudogene	Gm21387	ENSMUST00000189705	unprocessed_pseudogene		Y	-1	51606491	696
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000113869	protein_coding	alternative2	2	1	28641241	7702
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000140350	retained_intron		8	-1	124678948	4069
ENSMUSG00000019320	protein_coding	Noxo1	ENSMUST00000124864	retained_intron		17	1	24698241	1339
ENSMUSG00000058700	processed_pseudogene	Rpl21-ps12	ENSMUST00000080061	processed_pseudogene		6	-1	90845460	480
ENSMUSG00000099476	unprocessed_pseudogene	4930488N24Rik	ENSMUST00000188802	unprocessed_pseudogene		17	-1	14106450	1527
ENSMUSG00000117189	TEC	Gm49897	ENSMUST00000232878	TEC		17	-1	28140106	479
ENSMUSG00000109428	TEC	Gm45698	ENSMUST00000208537	TEC		7	1	81590894	1135
ENSMUSG00000019320	protein_coding	Noxo1	ENSMUST00000152527	retained_intron		17	1	24698314	746
ENSMUSG00000030917	protein_coding	Tmem159	ENSMUST00000155330	retained_intron		7	1	120102395	731
ENSMUSG00000117280	unprocessed_pseudogene	Gm49903	ENSMUST00000233203	unprocessed_pseudogene		17	-1	14126297	430
ENSMUSG00000081982	unprocessed_pseudogene	Sult2a-ps2	ENSMUST00000121135	unprocessed_pseudogene		7	1	13846161	405
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000124248	protein_coding		7	-1	4501361	2667
ENSMUSG00000102936	lincRNA	Gm35584	ENSMUST00000191767	lincRNA		3	1	68761495	641
ENSMUSG00000107795	sense_intronic	Gm44105	ENSMUST00000204401	sense_intronic		6	-1	90794475	308
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000113867	protein_coding	alternative2	2	1	28641243	7682
ENSMUSG00000019320	protein_coding	Noxo1	ENSMUST00000141522	processed_transcript		17	1	24698528	475
ENSMUSG00000030917	protein_coding	Tmem159	ENSMUST00000118737	protein_coding	principal1	7	1	120102490	1395
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000131633	retained_intron		8	-1	124682530	600
ENSMUSG00000026944	protein_coding	Abca2	ENSMUST00000149385	processed_transcript		2	1	25445665	804
ENSMUSG00000019320	protein_coding	Noxo1	ENSMUST00000150313	processed_transcript		17	1	24699395	566
ENSMUSG00000053801	protein_coding	Grwd1	ENSMUST00000209484	nonsense_mediated_decay		7	-1	45830795	1783
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000128390	retained_intron		8	-1	124682122	587
ENSMUSG00000100566	processed_pseudogene	Tmem167-ps2	ENSMUST00000190251	processed_pseudogene		7	1	13848729	214
ENSMUSG00000030917	protein_coding	Tmem159	ENSMUST00000208968	processed_transcript		7	1	120102895	102
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000215563	protein_coding		8	-1	124709948	204
ENSMUSG00000026944	protein_coding	Abca2	ENSMUST00000144560	processed_transcript		2	1	25445822	530
ENSMUSG00000102853	processed_pseudogene	Gm7270	ENSMUST00000195818	processed_pseudogene		3	1	68846079	1128
ENSMUSG00000053801	protein_coding	Grwd1	ENSMUST00000211265	nonsense_mediated_decay		7	-1	45830881	849
ENSMUSG00000078580	protein_coding	E430018J23Rik	ENSMUST00000165495	protein_coding	principal1	7	-1	127393619	3324
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000161356	protein_coding	principal3	5	-1	22344702	11699
ENSMUSG00000117159	processed_pseudogene	Gm49952	ENSMUST00000233682	processed_pseudogene		17	1	23415541	238
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000013886	protein_coding	principal1	7	-1	4501680	2983
ENSMUSG00000030468	protein_coding	Siglecg	ENSMUST00000005592	protein_coding	principal1	7	1	43408204	2569
ENSMUSG00000103218	processed_pseudogene	Gm7270	ENSMUST00000195850	processed_pseudogene		3	1	68846079	1131
ENSMUSG00000053801	protein_coding	Grwd1	ENSMUST00000107723	protein_coding	principal1	7	-1	45830789	1898
ENSMUSG00000037300	protein_coding	Ttc13	ENSMUST00000127167	retained_intron		8	-1	124721981	2409
ENSMUSG00000026944	protein_coding	Abca2	ENSMUST00000141065	processed_transcript		2	1	25445843	535
ENSMUSG00000112253	processed_pseudogene	Gm47329	ENSMUST00000219849	processed_pseudogene		10	-1	109386487	221
ENSMUSG00000026944	protein_coding	Abca2	ENSMUST00000125520	processed_transcript		2	1	25445162	710
ENSMUSG00000096270	unprocessed_pseudogene	Vmn2r-ps134	ENSMUST00000176907	unprocessed_pseudogene		17	-1	23446167	1046
ENSMUSG00000117185	antisense	Gm34510	ENSMUST00000232962	antisense		17	1	14203728	605
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000160791	processed_transcript		5	-1	21896068	891
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000127329	retained_intron		7	-1	4484032	554
ENSMUSG00000078580	protein_coding	E430018J23Rik	ENSMUST00000074249	protein_coding		7	-1	127393629	2063
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000153625	retained_intron		2	1	28641250	2388
ENSMUSG00000112260	TEC	3110043J17Rik	ENSMUST00000219153	TEC		10	1	109648779	760
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000062372	protein_coding	alternative1	5	-1	22344690	10885
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000153101	processed_transcript		7	-1	4482634	744
ENSMUSG00000078580	protein_coding	E430018J23Rik	ENSMUST00000106303	protein_coding		7	-1	127393620	576
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000124507	retained_intron		2	1	28641254	3640
ENSMUSG00000092517	polymorphic_pseudogene	Art2a	ENSMUST00000173420	polymorphic_pseudogene	principal1	7	-1	101560865	1257
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000134738	retained_intron		7	-1	4484499	659
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000150274	retained_intron		2	1	28663392	818
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000124304	processed_transcript		11	-1	54956104	1786
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000200318	retained_intron		5	-1	21893896	3355
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000133374	retained_intron		7	-1	4485314	655
ENSMUSG00000030468	protein_coding	Siglecg	ENSMUST00000154322	retained_intron		7	1	43408239	3898
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000200667	processed_transcript		5	-1	21899046	687
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000125715	retained_intron		2	1	28671015	703
ENSMUSG00000020331	protein_coding	Hcn2	ENSMUST00000099513	protein_coding	principal1	10	1	79716634	3195
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000199034	retained_intron		5	-1	21895988	356
ENSMUSG00000067121	processed_pseudogene	Gm7027	ENSMUST00000086958	processed_pseudogene		7	-1	101574321	862
ENSMUSG00000070490	processed_pseudogene	Gm10293	ENSMUST00000076317	processed_pseudogene		3	1	52612835	1002
ENSMUSG00000091272	TEC	Gm17641	ENSMUST00000215570	TEC		3	-1	68870266	2348
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000139642	retained_intron		2	1	28672278	772
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000136863	retained_intron		7	-1	4485708	871
ENSMUSG00000091272	TEC	Gm17641	ENSMUST00000166328	TEC		3	-1	68870266	2350
ENSMUSG00000030468	protein_coding	Siglecg	ENSMUST00000124502	retained_intron		7	1	43408268	3948
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000154710	retained_intron		7	-1	4485932	655
ENSMUSG00000020331	protein_coding	Hcn2	ENSMUST00000020581	protein_coding	principal1	10	1	79716634	3089
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000147679	retained_intron		7	-1	4486735	507
ENSMUSG00000074184	processed_pseudogene	Smt3h2-ps2	ENSMUST00000122370	processed_pseudogene		7	1	127397978	288
ENSMUSG00000083864	processed_pseudogene	Gm13719	ENSMUST00000122018	processed_pseudogene		2	-1	86328569	2111
ENSMUSG00000026812	protein_coding	Tsc1	ENSMUST00000113870	protein_coding	principal3	2	1	28658567	7595
ENSMUSG00000030468	protein_coding	Siglecg	ENSMUST00000131744	retained_intron		7	1	43408473	3991
ENSMUSG00000090449	processed_pseudogene	Gm17076	ENSMUST00000165185	processed_pseudogene		2	1	97039912	1401
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000159768	retained_intron		5	-1	21932719	2775
ENSMUSG00000030468	protein_coding	Siglecg	ENSMUST00000124885	retained_intron		7	1	43410484	580
ENSMUSG00000048826	protein_coding	Dact2	ENSMUST00000053218	protein_coding	principal1	17	-1	14204094	3250
ENSMUSG00000091288	processed_pseudogene	Gm17075	ENSMUST00000171924	processed_pseudogene		2	1	96999624	670
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000145689	retained_intron		7	-1	4501664	1370
ENSMUSG00000030468	protein_coding	Siglecg	ENSMUST00000123042	retained_intron		7	1	43411379	382
ENSMUSG00000015776	protein_coding	Med22	ENSMUST00000102899	protein_coding		2	-1	26910677	3506
ENSMUSG00000110016	lincRNA	Gm20751	ENSMUST00000210260	lincRNA		13	1	43716791	1270
ENSMUSG00000019254	protein_coding	Ppp1r12c	ENSMUST00000125220	nonsense_mediated_decay		7	-1	4501529	465
ENSMUSG00000046999	protein_coding	1110032F04Rik	ENSMUST00000054551	protein_coding	principal1	3	1	68869586	2578
ENSMUSG00000091061	lincRNA	4930445B16Rik	ENSMUST00000170085	lincRNA		2	-1	97083561	1123
ENSMUSG00000102913	unprocessed_pseudogene	Gm37723	ENSMUST00000194480	unprocessed_pseudogene		Y	-1	20430745	565
ENSMUSG00000030651	protein_coding	Art2b	ENSMUST00000209526	protein_coding	alternative2	7	-1	101585600	2819
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000161353	retained_intron		5	-1	22010264	2556
ENSMUSG00000048826	protein_coding	Dact2	ENSMUST00000232816	protein_coding		17	-1	14204304	532
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000063718	protein_coding	alternative2	11	1	93886217	3785
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000200695	protein_coding		5	1	30888694	730
ENSMUSG00000030651	protein_coding	Art2b	ENSMUST00000063920	protein_coding	principal2	7	-1	101581161	870
ENSMUSG00000053654	protein_coding	Krt42	ENSMUST00000107406	retained_intron		11	-1	100265978	1062
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000106673	protein_coding		4	1	108459426	679
ENSMUSG00000103664	lincRNA	Gm36261	ENSMUST00000191807	lincRNA		Y	1	20497512	537
ENSMUSG00000103664	lincRNA	Gm36261	ENSMUST00000193323	lincRNA		Y	1	20497512	352
ENSMUSG00000103005	lincRNA	Gm37898	ENSMUST00000193781	lincRNA		Y	1	20537098	174
ENSMUSG00000075190	protein_coding	Olfr1054	ENSMUST00000213205	protein_coding	principal1	2	-1	86335433	1410
ENSMUSG00000075190	protein_coding	Olfr1054	ENSMUST00000099895	protein_coding	principal1	2	-1	86333354	939
ENSMUSG00000050777	protein_coding	Tmem37	ENSMUST00000056089	protein_coding	principal1	1	-1	120074074	1311
ENSMUSG00000015776	protein_coding	Med22	ENSMUST00000015920	protein_coding	principal1	2	-1	26910569	973
ENSMUSG00000111716	unprocessed_pseudogene	Gm48554	ENSMUST00000215309	unprocessed_pseudogene		2	-1	86339184	196
ENSMUSG00000103752	lincRNA	Gm36467	ENSMUST00000195522	lincRNA		Y	1	20559991	437
ENSMUSG00000078816	protein_coding	Prkcg	ENSMUST00000100301	protein_coding	principal1	7	1	3303522	3127
ENSMUSG00000103752	lincRNA	Gm36467	ENSMUST00000195606	lincRNA		Y	1	20559991	622
ENSMUSG00000078512	protein_coding	Pramef6	ENSMUST00000105767	protein_coding	alternative2	4	-1	143897981	1967
ENSMUSG00000075189	protein_coding	Olfr1055	ENSMUST00000099894	protein_coding	principal1	2	-1	86350278	1182
ENSMUSG00000112317	TEC	Gm47580	ENSMUST00000218206	TEC		10	-1	52381226	2031
ENSMUSG00000015776	protein_coding	Med22	ENSMUST00000139815	protein_coding		2	-1	26910578	668
ENSMUSG00000102551	lincRNA	Gm37927	ENSMUST00000192238	lincRNA		Y	1	20603914	174
ENSMUSG00000075189	protein_coding	Olfr1055	ENSMUST00000213564	protein_coding	principal1	2	-1	86350284	1444
ENSMUSG00000078512	protein_coding	Pramef6	ENSMUST00000081645	protein_coding	principal2	4	-1	143900380	1487
ENSMUSG00000107319	antisense	Gm42670	ENSMUST00000201816	antisense		5	-1	67261262	1292
ENSMUSG00000027009	protein_coding	Itga4	ENSMUST00000155105	processed_transcript		2	1	79255426	2314
ENSMUSG00000028298	protein_coding	Cga	ENSMUST00000029975	protein_coding	principal1	4	1	34893779	687
ENSMUSG00000075189	protein_coding	Olfr1055	ENSMUST00000188023	protein_coding		2	-1	86347764	939
ENSMUSG00000002778	protein_coding	Kdelr1	ENSMUST00000002855	protein_coding	principal1	7	1	45872772	1599
ENSMUSG00000078816	protein_coding	Prkcg	ENSMUST00000172109	protein_coding		7	1	3303645	2119
ENSMUSG00000028298	protein_coding	Cga	ENSMUST00000135871	protein_coding		4	1	34893788	707
ENSMUSG00000028298	protein_coding	Cga	ENSMUST00000108130	protein_coding	principal1	4	1	34893788	609
ENSMUSG00000050587	protein_coding	Lrrc4c	ENSMUST00000135431	protein_coding	principal1	2	1	96318169	3646
ENSMUSG00000002778	protein_coding	Kdelr1	ENSMUST00000211716	protein_coding		7	1	45872825	1350
ENSMUSG00000078816	protein_coding	Prkcg	ENSMUST00000203081	nonsense_mediated_decay		7	1	3305344	778
ENSMUSG00000002778	protein_coding	Kdelr1	ENSMUST00000211152	retained_intron		7	1	45872887	639
ENSMUSG00000050587	protein_coding	Lrrc4c	ENSMUST00000162807	protein_coding	principal1	2	1	96318216	3132
ENSMUSG00000053654	protein_coding	Krt42	ENSMUST00000017270	protein_coding	principal1	11	-1	100269871	1542
ENSMUSG00000078816	protein_coding	Prkcg	ENSMUST00000203454	retained_intron		7	1	3328838	498
ENSMUSG00000038059	protein_coding	Smim3	ENSMUST00000042710	protein_coding	principal1	18	-1	60501987	1990
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000162427	retained_intron		5	-1	22344690	4828
ENSMUSG00000093444	unprocessed_pseudogene	Vmn1r-ps152	ENSMUST00000176452	unprocessed_pseudogene		18	-1	3081476	699
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000159741	retained_intron		5	-1	22048753	565
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000107854	protein_coding	principal3	11	1	93886219	5232
ENSMUSG00000002778	protein_coding	Kdelr1	ENSMUST00000211234	protein_coding		7	1	45873127	832
ENSMUSG00000038059	protein_coding	Smim3	ENSMUST00000237270	retained_intron		18	-1	60501576	5022
ENSMUSG00000117531	processed_pseudogene	Gm50073	ENSMUST00000234774	processed_pseudogene		18	-1	3105396	230
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000162876	nonsense_mediated_decay		5	-1	22134669	600
ENSMUSG00000002778	protein_coding	Kdelr1	ENSMUST00000211495	retained_intron		7	1	45881437	693
ENSMUSG00000085824	processed_transcript	Platr9	ENSMUST00000149572	processed_transcript		4	-1	34911481	1556
ENSMUSG00000107143	antisense	Gm6598	ENSMUST00000202719	antisense		5	-1	130223065	2615
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000162637	retained_intron		5	-1	22344690	1632
ENSMUSG00000085824	processed_transcript	Platr9	ENSMUST00000125820	processed_transcript		4	-1	34911481	951
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000162622	retained_intron		5	-1	22344690	1713
ENSMUSG00000037415	protein_coding	Ranbp10	ENSMUST00000239468	protein_coding	principal1	8	-1	105827350	5308
ENSMUSG00000108968	TEC	Gm45011	ENSMUST00000207620	TEC		7	1	28226358	2297
ENSMUSG00000091539	protein_coding	Vmn1r238	ENSMUST00000165255	protein_coding	principal1	18	-1	3123412	921
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000160707	retained_intron		5	-1	22344690	3409
ENSMUSG00000053094	protein_coding	Tmem248	ENSMUST00000202612	protein_coding		5	1	130217081	340
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000107852	protein_coding		11	1	93905153	1930
ENSMUSG00000037415	protein_coding	Ranbp10	ENSMUST00000212856	retained_intron		8	-1	105827205	1426
ENSMUSG00000050587	protein_coding	Lrrc4c	ENSMUST00000059049	protein_coding	principal1	2	1	97467657	3492
ENSMUSG00000042453	protein_coding	Reln	ENSMUST00000161782	processed_transcript		5	-1	22344702	2555
ENSMUSG00000070837	protein_coding	Aurkc	ENSMUST00000208049	protein_coding	alternative2	7	1	6995300	1401
ENSMUSG00000037415	protein_coding	Ranbp10	ENSMUST00000041400	protein_coding		8	-1	105827350	5308
ENSMUSG00000117353	processed_pseudogene	Gm50074	ENSMUST00000234980	processed_pseudogene		18	-1	3139305	274
ENSMUSG00000109502	processed_pseudogene	Gm18672	ENSMUST00000208035	processed_pseudogene		7	-1	28235920	270
ENSMUSG00000019861	protein_coding	Gopc	ENSMUST00000217995	protein_coding		10	-1	52349128	744
ENSMUSG00000050587	protein_coding	Lrrc4c	ENSMUST00000170144	protein_coding		2	1	97468089	407
ENSMUSG00000110958	antisense	Gm33332	ENSMUST00000213761	antisense		10	-1	19718704	742
ENSMUSG00000070837	protein_coding	Aurkc	ENSMUST00000086248	protein_coding	principal3	7	1	6995383	1154
ENSMUSG00000070837	protein_coding	Aurkc	ENSMUST00000208518	protein_coding		7	1	6995385	590
ENSMUSG00000103630	TEC	Gm37242	ENSMUST00000191873	TEC		1	-1	52655892	2085
ENSMUSG00000118393	IG_V_pseudogene	Gm50426	ENSMUST00000236616	IG_V_pseudogene		19	1	3184959	315
ENSMUSG00000070815	protein_coding	Vmn1r87	ENSMUST00000211249	protein_coding	principal1	7	-1	13140157	1835
ENSMUSG00000117761	IG_V_pseudogene	Gm50428	ENSMUST00000235610	IG_V_pseudogene		19	1	3134645	315
ENSMUSG00000045757	protein_coding	Zfp764	ENSMUST00000059199	protein_coding	principal1	7	-1	127406822	2508
ENSMUSG00000070837	protein_coding	Aurkc	ENSMUST00000207711	protein_coding	alternative2	7	1	6995503	1320
ENSMUSG00000070815	protein_coding	Vmn1r87	ENSMUST00000227443	protein_coding	principal1	7	-1	13140157	5319
ENSMUSG00000118182	IG_V_pseudogene	Gm50427	ENSMUST00000235785	IG_V_pseudogene		19	1	3142760	306
ENSMUSG00000056579	protein_coding	Tug1	ENSMUST00000132077	processed_transcript		11	-1	3647536	6719
ENSMUSG00000070815	protein_coding	Vmn1r87	ENSMUST00000228800	protein_coding	principal1	7	-1	13140157	1993
ENSMUSG00000070837	protein_coding	Aurkc	ENSMUST00000207660	protein_coding		7	1	6995669	698
ENSMUSG00000070815	protein_coding	Vmn1r87	ENSMUST00000094827	protein_coding	principal1	7	-1	13132358	888
ENSMUSG00000045757	protein_coding	Zfp764	ENSMUST00000139118	processed_transcript		7	-1	127406783	2405
ENSMUSG00000099709	unprocessed_pseudogene	Gm21396	ENSMUST00000188391	unprocessed_pseudogene		Y	-1	51681223	693
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000038552	protein_coding	principal1	16	-1	4679777	4296
ENSMUSG00000082851	processed_pseudogene	Gm11931	ENSMUST00000121630	processed_pseudogene		4	-1	33054284	447
ENSMUSG00000079562	protein_coding	Maea	ENSMUST00000114449	protein_coding	principal1	5	1	33335509	2193
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000155518	processed_transcript		11	1	93917756	4851
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000150028	processed_transcript		16	-1	4628871	498
ENSMUSG00000053094	protein_coding	Tmem248	ENSMUST00000202305	protein_coding		5	1	130219744	641
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000150237	processed_transcript		11	1	93912414	1693
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000150724	retained_intron		16	-1	4629666	671
ENSMUSG00000053094	protein_coding	Tmem248	ENSMUST00000200802	protein_coding		5	1	130219840	417
ENSMUSG00000079562	protein_coding	Maea	ENSMUST00000200716	protein_coding		5	1	33335561	459
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000155841	processed_transcript		11	1	93925540	3675
ENSMUSG00000020007	protein_coding	Il20ra	ENSMUST00000020185	protein_coding	principal1	10	1	19712570	2105
ENSMUSG00000079562	protein_coding	Maea	ENSMUST00000200882	nonsense_mediated_decay		5	1	33335565	338
ENSMUSG00000026385	protein_coding	Dbi	ENSMUST00000027634	protein_coding	principal1	1	-1	120121078	569
ENSMUSG00000056579	protein_coding	Tug1	ENSMUST00000153313	processed_transcript		11	-1	3647530	5112
ENSMUSG00000091407	protein_coding	Vmn2r117	ENSMUST00000171996	protein_coding	principal1	17	-1	23479699	7178
ENSMUSG00000079562	protein_coding	Maea	ENSMUST00000202113	protein_coding		5	1	33336185	462
ENSMUSG00000056579	protein_coding	Tug1	ENSMUST00000144852	processed_transcript		11	-1	3648812	4720
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000127539	processed_transcript		11	1	93886207	598
ENSMUSG00000091407	protein_coding	Vmn2r117	ENSMUST00000234002	nonsense_mediated_decay		17	-1	23479699	7579
ENSMUSG00000091407	protein_coding	Vmn2r117	ENSMUST00000234323	nonsense_mediated_decay		17	-1	23479699	7461
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000145354	processed_transcript		11	1	93886208	715
ENSMUSG00000109027	unprocessed_pseudogene	Olfr752-ps1	ENSMUST00000208736	unprocessed_pseudogene		17	-1	23492471	1141
ENSMUSG00000100969	lincRNA	1700030N03Rik	ENSMUST00000237047	lincRNA		19	-1	3197732	873
ENSMUSG00000117154	processed_pseudogene	Gm7898	ENSMUST00000233184	processed_pseudogene		17	1	23515454	331
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000107853	protein_coding	principal3	11	1	93885852	5245
ENSMUSG00000020007	protein_coding	Il20ra	ENSMUST00000217389	nonsense_mediated_decay		10	1	19712634	1095
ENSMUSG00000026385	protein_coding	Dbi	ENSMUST00000132118	nonsense_mediated_decay		1	-1	120121017	604
ENSMUSG00000056579	protein_coding	Tug1	ENSMUST00000226724	antisense		11	-1	3647906	3853
ENSMUSG00000040688	protein_coding	Tbl3	ENSMUST00000126319	protein_coding	principal1	17	-1	24707660	5226
ENSMUSG00000079562	protein_coding	Maea	ENSMUST00000202941	retained_intron		5	1	33362571	775
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000107850	protein_coding		11	1	93885866	906
ENSMUSG00000100969	lincRNA	1700030N03Rik	ENSMUST00000236704	lincRNA		19	-1	3197714	2974
ENSMUSG00000026385	protein_coding	Dbi	ENSMUST00000112648	protein_coding		1	-1	120120138	504
ENSMUSG00000100969	lincRNA	1700030N03Rik	ENSMUST00000190575	lincRNA		19	-1	3197714	3146
ENSMUSG00000079562	protein_coding	Maea	ENSMUST00000202839	retained_intron		5	1	33371597	496
ENSMUSG00000102785	lincRNA	Gm2447	ENSMUST00000193813	lincRNA		3	1	52739716	1815
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000140880	processed_transcript		11	1	93886106	693
ENSMUSG00000056579	protein_coding	Tug1	ENSMUST00000226545	processed_transcript		11	-1	3647282	1246
ENSMUSG00000026385	protein_coding	Dbi	ENSMUST00000128408	processed_transcript		1	-1	120120170	396
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000132739	processed_transcript		11	1	93909987	464
ENSMUSG00000056579	protein_coding	Tug1	ENSMUST00000227137	processed_transcript		11	-1	3647132	935
ENSMUSG00000102785	lincRNA	Gm2447	ENSMUST00000191954	lincRNA		3	1	52764599	544
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000138281	processed_transcript		11	1	93923067	692
ENSMUSG00000100969	lincRNA	1700030N03Rik	ENSMUST00000235916	lincRNA		19	-1	3197716	1242
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000097925	protein_coding	alternative2	4	1	108460010	5865
ENSMUSG00000046913	protein_coding	Olfr1451	ENSMUST00000207997	protein_coding	principal1	19	1	12995014	1698
ENSMUSG00000108663	processed_pseudogene	Gm33080	ENSMUST00000205429	processed_pseudogene		7	-1	127410991	172
ENSMUSG00000056579	protein_coding	Tug1	ENSMUST00000182330	processed_transcript		11	-1	3649042	382
ENSMUSG00000059474	protein_coding	Mbtd1	ENSMUST00000063645	protein_coding		11	1	93886880	2138
ENSMUSG00000041341	protein_coding	Atg2b	ENSMUST00000221015	protein_coding		12	-1	105646829	3687
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000155068	protein_coding		4	1	108479081	3283
ENSMUSG00000046913	protein_coding	Olfr1451	ENSMUST00000063144	protein_coding	principal1	19	1	12998988	933
ENSMUSG00000056579	protein_coding	Tug1	ENSMUST00000193809	protein_coding	principal1	11	-1	3649673	1612
ENSMUSG00000100969	lincRNA	1700030N03Rik	ENSMUST00000189643	lincRNA		19	-1	3160190	646
ENSMUSG00000100969	lincRNA	1700030N03Rik	ENSMUST00000191405	lincRNA		19	-1	3160181	651
ENSMUSG00000026385	protein_coding	Dbi	ENSMUST00000151708	protein_coding		1	-1	120120937	491
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000138809	processed_transcript		4	1	108526474	636
ENSMUSG00000078453	protein_coding	Abracl	ENSMUST00000020002	protein_coding	principal1	10	-1	18023288	846
ENSMUSG00000104109	lincRNA	Gm30292	ENSMUST00000194198	lincRNA		3	-1	52797785	3000
ENSMUSG00000093980	protein_coding	Olfr493	ENSMUST00000080106	protein_coding	principal1	7	-1	108346979	945
ENSMUSG00000040688	protein_coding	Tbl3	ENSMUST00000046534	retained_intron		17	-1	24707631	2767
ENSMUSG00000100969	lincRNA	1700030N03Rik	ENSMUST00000190668	lincRNA		19	-1	3197698	452
ENSMUSG00000083915	processed_pseudogene	Gm13932	ENSMUST00000120873	processed_pseudogene		2	-1	109792534	610
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000135823	nonsense_mediated_decay		16	-1	4679678	2676
ENSMUSG00000029167	protein_coding	Ppargc1a	ENSMUST00000132734	protein_coding	principal1	5	-1	51553922	6464
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000151349	processed_transcript		4	1	108542266	541
ENSMUSG00000117765	processed_pseudogene	Gm5236	ENSMUST00000237983	processed_pseudogene		18	1	47729767	762
ENSMUSG00000040688	protein_coding	Tbl3	ENSMUST00000130633	protein_coding		17	-1	24702507	896
ENSMUSG00000026385	protein_coding	Dbi	ENSMUST00000135937	retained_intron		1	-1	120121047	660
ENSMUSG00000100969	lincRNA	1700030N03Rik	ENSMUST00000190982	lincRNA		19	-1	3197698	452
ENSMUSG00000094399	protein_coding	Gm21477	ENSMUST00000189543	protein_coding	principal1	Y	1	87116821	924
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000153916	processed_transcript		4	1	108542365	567
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000151156	retained_intron		16	-1	4633859	523
ENSMUSG00000026385	protein_coding	Dbi	ENSMUST00000149628	retained_intron		1	-1	120121014	331
ENSMUSG00000104401	lincRNA	Gm20750	ENSMUST00000194274	lincRNA		3	-1	52927666	3515
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000138088	processed_transcript		4	1	108542418	591
ENSMUSG00000040688	protein_coding	Tbl3	ENSMUST00000149326	retained_intron		17	-1	24703336	608
ENSMUSG00000094399	protein_coding	Gm21477	ENSMUST00000179970	protein_coding		Y	1	87118255	498
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000080067	protein_coding	principal2	5	1	24425232	4179
ENSMUSG00000100969	lincRNA	1700030N03Rik	ENSMUST00000190259	lincRNA		19	-1	3197703	395
ENSMUSG00000078453	protein_coding	Abracl	ENSMUST00000220110	protein_coding	principal1	10	-1	18023218	768
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000139072	retained_intron		16	-1	4635035	1095
ENSMUSG00000117928	processed_pseudogene	Gm42068	ENSMUST00000237449	processed_pseudogene		19	1	3156623	390
ENSMUSG00000040688	protein_coding	Tbl3	ENSMUST00000142362	retained_intron		17	-1	24705824	852
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000127602	processed_transcript		4	1	108549085	484
ENSMUSG00000002771	protein_coding	Grin2d	ENSMUST00000002848	protein_coding	principal1	7	-1	45867129	5431
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000144305	processed_transcript		5	1	24425276	234
ENSMUSG00000053094	protein_coding	Tmem248	ENSMUST00000111298	protein_coding	principal1	5	1	130222335	3570
ENSMUSG00000109631	protein_coding	Olfr494	ENSMUST00000209743	protein_coding	principal1	7	1	108365335	1002
ENSMUSG00000078453	protein_coding	Abracl	ENSMUST00000218994	protein_coding	principal1	10	-1	18022878	425
ENSMUSG00000117464	processed_pseudogene	Gm50075	ENSMUST00000234747	processed_pseudogene		18	-1	3171932	486
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000145590	processed_transcript		4	1	108555452	2472
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000143723	processed_transcript		16	-1	4646716	843
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000139081	processed_transcript		5	1	24425285	332
ENSMUSG00000086163	antisense	Gm14206	ENSMUST00000132973	antisense		11	-1	100291286	747
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000127125	retained_intron		16	-1	4635041	736
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000128042	protein_coding		4	1	108555736	587
ENSMUSG00000109631	protein_coding	Olfr494	ENSMUST00000210291	protein_coding	principal1	7	1	108367490	947
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000155598	protein_coding		5	1	24426831	453
ENSMUSG00000002771	protein_coding	Grin2d	ENSMUST00000211713	protein_coding	principal1	7	-1	45870429	5244
ENSMUSG00000115771	bidirectional_promoter_lncRNA	Gm49312	ENSMUST00000228698	bidirectional_promoter_lncRNA		15	1	38079102	462
ENSMUSG00000078453	protein_coding	Abracl	ENSMUST00000217718	processed_transcript		10	-1	18013355	300
ENSMUSG00000109934	processed_pseudogene	Gm45392	ENSMUST00000210441	processed_pseudogene		7	-1	108387849	214
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000130125	retained_intron		16	-1	4661922	728
ENSMUSG00000034610	protein_coding	Tut4	ENSMUST00000043368	protein_coding	principal2	4	1	108459426	6054
ENSMUSG00000078453	protein_coding	Abracl	ENSMUST00000220433	protein_coding		10	-1	18023090	275
ENSMUSG00000087265	lincRNA	Gm12349	ENSMUST00000153030	lincRNA		11	1	100291671	657
ENSMUSG00000053094	protein_coding	Tmem248	ENSMUST00000065329	protein_coding	principal1	5	1	130219744	3607
ENSMUSG00000002771	protein_coding	Grin2d	ENSMUST00000211250	protein_coding		7	-1	45878378	1009
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000090480	protein_coding		16	-1	4679777	1150
ENSMUSG00000020513	protein_coding	Tubd1	ENSMUST00000108030	protein_coding		11	1	86544991	1964
ENSMUSG00000085093	sense_intronic	Gm12737	ENSMUST00000142835	sense_intronic		4	1	108513781	725
ENSMUSG00000106751	TEC	Gm42467	ENSMUST00000202954	TEC		5	1	130226216	1447
ENSMUSG00000083783	processed_pseudogene	Gm12739	ENSMUST00000119769	processed_pseudogene		4	-1	108484552	382
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000115049	protein_coding	alternative2	5	1	24428208	3924
ENSMUSG00000029167	protein_coding	Ppargc1a	ENSMUST00000031059	nonsense_mediated_decay		5	-1	51553871	3041
ENSMUSG00000110020	antisense	Gm45441	ENSMUST00000209301	antisense		7	1	45830895	1235
ENSMUSG00000101980	unprocessed_pseudogene	Gm21922	ENSMUST00000185911	unprocessed_pseudogene		Y	-1	75466372	678
ENSMUSG00000110020	antisense	Gm45441	ENSMUST00000209250	antisense		7	1	45830908	682
ENSMUSG00000029167	protein_coding	Ppargc1a	ENSMUST00000196968	protein_coding		5	-1	51553891	2754
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000123031	retained_intron		16	-1	4679713	2280
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000136440	processed_transcript		5	1	24428263	355
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000201167	retained_intron		5	1	30888852	2922
ENSMUSG00000029167	protein_coding	Ppargc1a	ENSMUST00000151104	nonsense_mediated_decay		5	-1	51567704	2452
ENSMUSG00000083749	unprocessed_pseudogene	Gm13100	ENSMUST00000117157	unprocessed_pseudogene		4	1	143913857	1439
ENSMUSG00000109830	processed_pseudogene	Gm7965	ENSMUST00000211675	processed_pseudogene		7	-1	13151581	1105
ENSMUSG00000110020	antisense	Gm45441	ENSMUST00000210177	antisense		7	1	45833866	359
ENSMUSG00000039637	protein_coding	Coro7	ENSMUST00000127850	retained_intron		16	-1	4679742	610
ENSMUSG00000020513	protein_coding	Tubd1	ENSMUST00000020821	protein_coding		11	1	86544991	2070
ENSMUSG00000029167	protein_coding	Ppargc1a	ENSMUST00000127135	protein_coding		5	-1	51567726	488
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000115047	protein_coding	alternative2	5	1	24428423	4264
ENSMUSG00000040653	protein_coding	Ppp1r14c	ENSMUST00000043374	protein_coding	principal1	10	1	3366057	2617
ENSMUSG00000020513	protein_coding	Tubd1	ENSMUST00000069503	protein_coding	principal1	11	1	86544991	1871
ENSMUSG00000100669	unprocessed_pseudogene	Gm21111	ENSMUST00000187671	unprocessed_pseudogene		Y	-1	75540398	696
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000155636	retained_intron		5	1	24429018	637
ENSMUSG00000105762	TEC	Gm43605	ENSMUST00000199663	TEC		5	-1	51514293	3426
ENSMUSG00000052763	protein_coding	Zfp212	ENSMUST00000009411	protein_coding	principal1	6	1	47920476	2801
ENSMUSG00000049806	protein_coding	Olfr466	ENSMUST00000214214	protein_coding	principal1	13	1	65150240	4192
ENSMUSG00000117254	lincRNA	Gm34567	ENSMUST00000233271	lincRNA		17	1	14249851	2965
ENSMUSG00000040653	protein_coding	Ppp1r14c	ENSMUST00000217573	protein_coding		10	1	3366544	2013
ENSMUSG00000106575	TEC	Gm42613	ENSMUST00000199975	TEC		5	1	51499528	1931
ENSMUSG00000020513	protein_coding	Tubd1	ENSMUST00000164931	protein_coding		11	1	86555195	783
ENSMUSG00000106974	processed_pseudogene	Vmn1r-ps5	ENSMUST00000202963	processed_pseudogene		6	-1	3073067	931
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000146765	retained_intron		5	1	24431336	679
ENSMUSG00000049806	protein_coding	Olfr466	ENSMUST00000058907	protein_coding	principal1	13	1	65152226	927
ENSMUSG00000105622	TEC	Gm42615	ENSMUST00000197704	TEC		5	-1	51492916	1820
ENSMUSG00000052763	protein_coding	Zfp212	ENSMUST00000156500	retained_intron		6	1	47926306	718
ENSMUSG00000105442	TEC	Gm42614	ENSMUST00000198724	TEC		5	-1	51484305	1554
ENSMUSG00000042680	protein_coding	Garem1	ENSMUST00000049260	protein_coding	principal2	18	-1	21300138	4923
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000132505	retained_intron		5	1	24435545	776
ENSMUSG00000019861	protein_coding	Gopc	ENSMUST00000020008	protein_coding	principal2	10	-1	52382075	4216
ENSMUSG00000039646	protein_coding	Vasn	ENSMUST00000038770	protein_coding	principal1	16	1	4639941	2829
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000198786	retained_intron		5	1	24436760	2497
ENSMUSG00000107380	transcribed_processed_pseudogene	Vmn1r-ps6	ENSMUST00000201079	transcribed_processed_pseudogene		6	-1	3108410	934
ENSMUSG00000048261	processed_pseudogene	Gm4879	ENSMUST00000122190	processed_pseudogene		7	1	13178903	1272
ENSMUSG00000020513	protein_coding	Tubd1	ENSMUST00000167178	protein_coding	principal1	11	1	86544991	1976
ENSMUSG00000109148	polymorphic_pseudogene	Olfr1452-ps1	ENSMUST00000208396	polymorphic_pseudogene	principal1	19	1	13016225	925
ENSMUSG00000028962	protein_coding	Slc4a2	ENSMUST00000140722	retained_intron		5	1	24439746	737
ENSMUSG00000107380	transcribed_processed_pseudogene	Vmn1r-ps6	ENSMUST00000202526	processed_transcript		6	-1	3112864	135
ENSMUSG00000039646	protein_coding	Vasn	ENSMUST00000138044	processed_transcript		16	1	4639968	359
ENSMUSG00000110035	lincRNA	Gm30931	ENSMUST00000211698	lincRNA		8	1	46363251	1320
ENSMUSG00000042680	protein_coding	Garem1	ENSMUST00000234115	protein_coding	alternative2	18	-1	21300123	4932
ENSMUSG00000110035	lincRNA	Gm30931	ENSMUST00000210605	lincRNA		8	1	46363256	1525
ENSMUSG00000118139	lincRNA	Gm41720	ENSMUST00000237736	lincRNA		18	1	47733108	700
ENSMUSG00000019861	protein_coding	Gopc	ENSMUST00000217753	protein_coding		10	-1	52381718	3875
ENSMUSG00000054702	protein_coding	Ap1s3	ENSMUST00000162342	protein_coding	principal1	1	-1	79671972	2876
ENSMUSG00000117853	protein_coding	Vmn1r88	ENSMUST00000237109	protein_coding	principal1	7	1	13159568	8881
ENSMUSG00000019861	protein_coding	Gopc	ENSMUST00000220099	retained_intron		10	-1	52350400	2356
ENSMUSG00000117853	protein_coding	Vmn1r88	ENSMUST00000236472	protein_coding	principal1	7	1	13159568	9118
ENSMUSG00000019861	protein_coding	Gopc	ENSMUST00000217710	retained_intron		10	-1	52382119	5850
ENSMUSG00000034353	protein_coding	Ramp1	ENSMUST00000165855	protein_coding		1	1	91179822	852
ENSMUSG00000041199	protein_coding	Rpusd1	ENSMUST00000237183	protein_coding		17	1	25727670	1743
ENSMUSG00000117853	protein_coding	Vmn1r88	ENSMUST00000171783	protein_coding	principal1	7	1	13177719	951
ENSMUSG00000054702	protein_coding	Ap1s3	ENSMUST00000159312	nonsense_mediated_decay		1	-1	79671965	902
ENSMUSG00000085067	lincRNA	Gm15631	ENSMUST00000142962	lincRNA		6	-1	105677581	2436
ENSMUSG00000054702	protein_coding	Ap1s3	ENSMUST00000160706	nonsense_mediated_decay		1	-1	79671968	453
ENSMUSG00000100260	unprocessed_pseudogene	Gm28608	ENSMUST00000186860	unprocessed_pseudogene		Y	-1	75569511	615
ENSMUSG00000092274	lincRNA	Neat1	ENSMUST00000173672	lincRNA		19	-1	5845478	20771
ENSMUSG00000102235	TEC	Gm37886	ENSMUST00000195349	TEC		1	-1	79621034	1513
ENSMUSG00000092274	lincRNA	Neat1	ENSMUST00000232969	lincRNA		19	-1	5828012	711
ENSMUSG00000019861	protein_coding	Gopc	ENSMUST00000105475	protein_coding	alternative2	10	-1	52382124	4317
ENSMUSG00000105656	sense_intronic	Gm43017	ENSMUST00000198296	sense_intronic		5	1	3544037	752
ENSMUSG00000100675	unprocessed_pseudogene	Gm28607	ENSMUST00000190142	unprocessed_pseudogene		Y	-1	75606030	339
ENSMUSG00000041341	protein_coding	Atg2b	ENSMUST00000041055	protein_coding	principal1	12	-1	105685211	7546
ENSMUSG00000034353	protein_coding	Ramp1	ENSMUST00000188475	protein_coding		1	1	91180042	711
ENSMUSG00000112550	processed_pseudogene	Gm6627	ENSMUST00000218299	processed_pseudogene		10	-1	52343657	2386
ENSMUSG00000092274	lincRNA	Neat1	ENSMUST00000174287	lincRNA		19	-1	5845476	3004
ENSMUSG00000005958	protein_coding	Ephb3	ENSMUST00000006112	protein_coding	principal1	16	1	21204755	4185
ENSMUSG00000110365	lincRNA	Gm38947	ENSMUST00000209940	lincRNA		7	-1	13197215	2720
ENSMUSG00000109911	unprocessed_pseudogene	Gm45525	ENSMUST00000210800	unprocessed_pseudogene		7	1	13196629	389
ENSMUSG00000005958	protein_coding	Ephb3	ENSMUST00000232407	protein_coding		16	1	21210524	669
ENSMUSG00000092274	lincRNA	Neat1	ENSMUST00000174829	lincRNA		19	-1	5845259	1030
ENSMUSG00000055341	protein_coding	Zfp457	ENSMUST00000225338	protein_coding		13	-1	67291634	520
ENSMUSG00000099912	unprocessed_pseudogene	Gm28368	ENSMUST00000189804	unprocessed_pseudogene		Y	-1	87203864	696
ENSMUSG00000041341	protein_coding	Atg2b	ENSMUST00000220960	retained_intron		12	-1	105629629	6201
ENSMUSG00000055341	protein_coding	Zfp457	ENSMUST00000224325	protein_coding		13	-1	67294221	1811
ENSMUSG00000041287	protein_coding	Sox15	ENSMUST00000047373	protein_coding	principal1	11	1	69655314	861
ENSMUSG00000100544	lincRNA	Gm28606	ENSMUST00000188938	lincRNA		Y	1	75653226	1499
ENSMUSG00000005958	protein_coding	Ephb3	ENSMUST00000161063	protein_coding		16	1	21211095	4748
ENSMUSG00000100544	lincRNA	Gm28606	ENSMUST00000190412	lincRNA		Y	1	75653679	438
ENSMUSG00000041341	protein_coding	Atg2b	ENSMUST00000222395	processed_transcript		12	-1	105623142	1736
ENSMUSG00000034353	protein_coding	Ramp1	ENSMUST00000097648	protein_coding	principal1	1	1	91180046	2325
ENSMUSG00000005958	protein_coding	Ephb3	ENSMUST00000231316	protein_coding		16	1	21212417	720
ENSMUSG00000047497	protein_coding	Adamts12	ENSMUST00000227189	retained_intron		15	1	11064790	1826
ENSMUSG00000041199	protein_coding	Rpusd1	ENSMUST00000237785	protein_coding	principal1	17	1	25727717	1761
ENSMUSG00000055341	protein_coding	Zfp457	ENSMUST00000049705	protein_coding	principal1	13	-1	67306412	2117
ENSMUSG00000015396	protein_coding	Cd83	ENSMUST00000015540	protein_coding	principal1	13	1	43784775	2477
ENSMUSG00000055341	protein_coding	Zfp457	ENSMUST00000225090	processed_transcript		13	-1	67306485	1881
ENSMUSG00000041199	protein_coding	Rpusd1	ENSMUST00000047273	protein_coding	principal1	17	1	25727717	1745
ENSMUSG00000041341	protein_coding	Atg2b	ENSMUST00000221568	retained_intron		12	-1	105685200	3833
ENSMUSG00000104792	processed_pseudogene	Gm43308	ENSMUST00000197236	processed_pseudogene		3	-1	39128905	373
ENSMUSG00000055341	protein_coding	Zfp457	ENSMUST00000192242	retained_intron		13	-1	67306467	782
ENSMUSG00000015396	protein_coding	Cd83	ENSMUST00000221359	retained_intron		13	1	43785185	2158
ENSMUSG00000100902	protein_coding	Gm20850	ENSMUST00000188672	protein_coding	principal1	Y	1	75715322	924
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000105827	protein_coding	alternative2	4	1	138216296	5155
ENSMUSG00000005958	protein_coding	Ephb3	ENSMUST00000159575	retained_intron		16	1	21216817	3422
ENSMUSG00000107333	processed_pseudogene	Gm43008	ENSMUST00000202346	processed_pseudogene		3	-1	39217846	286
ENSMUSG00000044715	protein_coding	Gskip	ENSMUST00000222284	protein_coding		12	1	105684829	1064
ENSMUSG00000005958	protein_coding	Ephb3	ENSMUST00000160053	retained_intron		16	1	21221686	811
ENSMUSG00000050533	processed_pseudogene	Gm9845	ENSMUST00000056409	processed_pseudogene		3	-1	39358903	598
ENSMUSG00000041199	protein_coding	Rpusd1	ENSMUST00000235645	processed_transcript		17	1	25727732	1531
ENSMUSG00000024663	protein_coding	Rab3il1	ENSMUST00000121418	protein_coding	alternative2	19	1	10001669	3026
ENSMUSG00000085471	antisense	4933423P22Rik	ENSMUST00000126219	antisense		2	1	90479236	4595
ENSMUSG00000095629	protein_coding	Vmn1r89	ENSMUST00000227176	protein_coding	principal2	7	1	13213020	4189
ENSMUSG00000075188	protein_coding	Olfr1056	ENSMUST00000216547	protein_coding	principal1	2	-1	86362469	2213
ENSMUSG00000106786	TEC	Gm42781	ENSMUST00000201317	TEC		3	1	39636059	2719
ENSMUSG00000024663	protein_coding	Rab3il1	ENSMUST00000137637	protein_coding		19	1	10015016	513
ENSMUSG00000095629	protein_coding	Vmn1r89	ENSMUST00000227239	protein_coding	principal2	7	1	13213020	1992
ENSMUSG00000075188	protein_coding	Olfr1056	ENSMUST00000099893	protein_coding	principal1	2	-1	86356437	1079
ENSMUSG00000085471	antisense	4933423P22Rik	ENSMUST00000126953	antisense		2	1	90479250	1005
ENSMUSG00000095629	protein_coding	Vmn1r89	ENSMUST00000228587	protein_coding	principal2	7	1	13213020	2061
ENSMUSG00000044715	protein_coding	Gskip	ENSMUST00000051934	protein_coding	principal1	12	1	105685384	2720
ENSMUSG00000112072	processed_pseudogene	Gm47244	ENSMUST00000218849	processed_pseudogene		10	1	83659271	967
ENSMUSG00000095629	protein_coding	Vmn1r89	ENSMUST00000228825	retained_intron		7	1	13213020	4470
ENSMUSG00000095629	protein_coding	Vmn1r89	ENSMUST00000228795	retained_intron		7	1	13213020	2342
ENSMUSG00000095629	protein_coding	Vmn1r89	ENSMUST00000227390	protein_coding	alternative2	7	1	13213020	1348
ENSMUSG00000095629	protein_coding	Vmn1r89	ENSMUST00000227276	protein_coding	alternative2	7	1	13213020	1417
ENSMUSG00000044715	protein_coding	Gskip	ENSMUST00000222841	processed_transcript		12	1	105685401	917
ENSMUSG00000095629	protein_coding	Vmn1r89	ENSMUST00000227319	protein_coding		7	1	13213020	985
ENSMUSG00000020919	protein_coding	Stat5b	ENSMUST00000107358	protein_coding	principal1	11	-1	100822528	5213
ENSMUSG00000095629	protein_coding	Vmn1r89	ENSMUST00000226717	protein_coding	principal2	7	1	13213020	4120
ENSMUSG00000066704	protein_coding	Cyp2b19	ENSMUST00000077855	protein_coding	principal1	7	1	26757142	2740
ENSMUSG00000025314	protein_coding	Ptprj	ENSMUST00000129323	processed_transcript		2	-1	90430445	513
ENSMUSG00000045251	protein_coding	Zfp688	ENSMUST00000136123	retained_intron		7	-1	127422027	1298
ENSMUSG00000037720	protein_coding	Tmem33	ENSMUST00000037918	protein_coding	principal3	5	1	67260565	6247
ENSMUSG00000095629	protein_coding	Vmn1r89	ENSMUST00000053008	protein_coding	principal2	7	1	13219339	951
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000105825	protein_coding	alternative2	4	1	138216635	4618
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000142420	processed_transcript		4	1	138216600	396
ENSMUSG00000066704	protein_coding	Cyp2b19	ENSMUST00000132315	retained_intron		7	1	26757163	2234
ENSMUSG00000020919	protein_coding	Stat5b	ENSMUST00000004143	protein_coding	principal1	11	-1	100850724	5062
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000137851	protein_coding		4	1	138217127	810
ENSMUSG00000066704	protein_coding	Cyp2b19	ENSMUST00000138018	retained_intron		7	1	26766555	675
ENSMUSG00000031490	protein_coding	Eif4ebp1	ENSMUST00000033880	protein_coding	principal1	8	1	27260329	1997
ENSMUSG00000037720	protein_coding	Tmem33	ENSMUST00000162543	protein_coding		5	1	67260651	664
ENSMUSG00000045251	protein_coding	Zfp688	ENSMUST00000106300	protein_coding	principal1	7	-1	127422034	1015
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000130071	protein_coding		4	1	138217294	446
ENSMUSG00000058503	protein_coding	Fam133b	ENSMUST00000197082	protein_coding	alternative2	5	1	3543833	1943
ENSMUSG00000037720	protein_coding	Tmem33	ENSMUST00000161233	protein_coding		5	1	67260696	495
ENSMUSG00000031490	protein_coding	Eif4ebp1	ENSMUST00000210959	processed_transcript		8	1	27264414	798
ENSMUSG00000094755	protein_coding	Olfr1453	ENSMUST00000087773	protein_coding	principal1	19	-1	13028327	924
ENSMUSG00000037720	protein_coding	Tmem33	ENSMUST00000201979	nonsense_mediated_decay		5	1	67260696	1283
ENSMUSG00000045251	protein_coding	Zfp688	ENSMUST00000148483	nonsense_mediated_decay		7	-1	127422039	1302
ENSMUSG00000114192	lincRNA	Gm33115	ENSMUST00000223487	lincRNA		13	1	43842438	703
ENSMUSG00000103748	TEC	Gm38243	ENSMUST00000194737	TEC		1	-1	21840514	1567
ENSMUSG00000020919	protein_coding	Stat5b	ENSMUST00000126266	processed_transcript		11	-1	100850538	727
ENSMUSG00000045251	protein_coding	Zfp688	ENSMUST00000135886	retained_intron		7	-1	127422068	2732
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000137865	protein_coding		4	1	138216626	669
ENSMUSG00000114192	lincRNA	Gm33115	ENSMUST00000220913	lincRNA		13	1	43843960	743
ENSMUSG00000118113	lincRNA	Gm4146	ENSMUST00000236862	lincRNA		18	-1	47789533	701
ENSMUSG00000058503	protein_coding	Fam133b	ENSMUST00000198598	retained_intron		5	1	3543836	2750
ENSMUSG00000045251	protein_coding	Zfp688	ENSMUST00000126756	protein_coding		7	-1	127421850	338
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000124305	protein_coding		4	1	138216634	620
ENSMUSG00000024663	protein_coding	Rab3il1	ENSMUST00000149967	protein_coding	alternative2	19	1	10015044	2305
ENSMUSG00000089800	processed_pseudogene	Rps19-ps10	ENSMUST00000159750	processed_pseudogene		10	-1	52385093	435
ENSMUSG00000034848	protein_coding	Ttc21b	ENSMUST00000102718	protein_coding	principal1	2	-1	66256617	4470
ENSMUSG00000045251	protein_coding	Zfp688	ENSMUST00000129038	nonsense_mediated_decay		7	-1	127421967	492
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000148681	protein_coding		4	1	138228583	913
ENSMUSG00000113780	lincRNA	Gm33195	ENSMUST00000220827	lincRNA		13	1	43864669	2337
ENSMUSG00000058503	protein_coding	Fam133b	ENSMUST00000115527	protein_coding	principal2	5	1	3543838	1491
ENSMUSG00000071866	protein_coding	Ppia	ENSMUST00000132846	protein_coding	principal1	11	1	6415443	1170
ENSMUSG00000034848	protein_coding	Ttc21b	ENSMUST00000125446	protein_coding		2	-1	66256592	4061
ENSMUSG00000037720	protein_coding	Tmem33	ENSMUST00000160352	protein_coding	alternative1	5	1	67260697	5322
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000155344	processed_transcript		4	1	138229657	568
ENSMUSG00000113671	lincRNA	Gm2233	ENSMUST00000222566	lincRNA		13	1	43948879	1916
ENSMUSG00000071866	protein_coding	Ppia	ENSMUST00000135789	retained_intron		11	1	6415868	355
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000105826	protein_coding	alternative2	4	1	138216627	3348
ENSMUSG00000094986	protein_coding	Olfr1454	ENSMUST00000217568	protein_coding	principal1	19	1	13060679	4215
ENSMUSG00000058503	protein_coding	Fam133b	ENSMUST00000199666	nonsense_mediated_decay		5	1	3543838	1450
ENSMUSG00000024663	protein_coding	Rab3il1	ENSMUST00000113161	protein_coding	principal3	19	1	10018193	5146
ENSMUSG00000042388	protein_coding	Dlgap3	ENSMUST00000046659	protein_coding	principal2	4	1	127169204	3884
ENSMUSG00000109953	TEC	5430430B14Rik	ENSMUST00000209427	TEC		8	1	27279441	1630
ENSMUSG00000034848	protein_coding	Ttc21b	ENSMUST00000169968	retained_intron		2	-1	66235138	5807
ENSMUSG00000094986	protein_coding	Olfr1454	ENSMUST00000213806	protein_coding	principal1	19	1	13060610	3906
ENSMUSG00000024663	protein_coding	Rab3il1	ENSMUST00000238672	protein_coding	alternative2	19	1	10018193	5293
ENSMUSG00000058503	protein_coding	Fam133b	ENSMUST00000196059	retained_intron		5	1	3543844	1961
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000154581	retained_intron		4	1	138217268	3444
ENSMUSG00000110154	processed_pseudogene	Gm9731	ENSMUST00000209480	processed_pseudogene		8	1	27296055	747
ENSMUSG00000094986	protein_coding	Olfr1454	ENSMUST00000214695	protein_coding	principal1	19	1	13060631	4049
ENSMUSG00000037720	protein_coding	Tmem33	ENSMUST00000162074	nonsense_mediated_decay		5	1	67260704	455
ENSMUSG00000058503	protein_coding	Fam133b	ENSMUST00000196499	retained_intron		5	1	3559662	569
ENSMUSG00000037720	protein_coding	Tmem33	ENSMUST00000202324	retained_intron		5	1	67260754	2320
ENSMUSG00000034848	protein_coding	Ttc21b	ENSMUST00000131503	retained_intron		2	-1	66249410	1276
ENSMUSG00000024663	protein_coding	Rab3il1	ENSMUST00000117641	protein_coding	alternative2	19	1	10018194	2004
ENSMUSG00000027009	protein_coding	Itga4	ENSMUST00000099972	protein_coding	principal1	2	1	79255500	9767
ENSMUSG00000042388	protein_coding	Dlgap3	ENSMUST00000106092	protein_coding	alternative2	4	1	127194613	2901
ENSMUSG00000058503	protein_coding	Fam133b	ENSMUST00000195924	retained_intron		5	1	3565033	692
ENSMUSG00000113252	lincRNA	Gm33489	ENSMUST00000223171	lincRNA		13	-1	44018522	673
ENSMUSG00000094986	protein_coding	Olfr1454	ENSMUST00000073732	protein_coding	principal1	19	1	13063413	924
ENSMUSG00000058503	protein_coding	Fam133b	ENSMUST00000200354	retained_intron		5	1	3566836	2196
ENSMUSG00000071866	protein_coding	Ppia	ENSMUST00000090749	nonsense_mediated_decay		11	1	6415870	746
ENSMUSG00000024663	protein_coding	Rab3il1	ENSMUST00000144788	nonsense_mediated_decay		19	1	10018194	2173
ENSMUSG00000042388	protein_coding	Dlgap3	ENSMUST00000137062	processed_transcript		4	1	127203306	438
ENSMUSG00000113276	lincRNA	Gm33630	ENSMUST00000223038	lincRNA		13	-1	44099960	2071
ENSMUSG00000037720	protein_coding	Tmem33	ENSMUST00000161369	protein_coding	principal3	5	1	67260805	6164
ENSMUSG00000086671	antisense	Gm13618	ENSMUST00000128859	antisense		2	1	66187836	384
ENSMUSG00000042388	protein_coding	Dlgap3	ENSMUST00000106094	protein_coding	principal2	4	1	127172880	4207
ENSMUSG00000039354	protein_coding	Smarcal1	ENSMUST00000145868	protein_coding		1	1	72583251	579
ENSMUSG00000024663	protein_coding	Rab3il1	ENSMUST00000131407	protein_coding		19	1	10018265	706
ENSMUSG00000106893	polymorphic_pseudogene	Vmn1r261	ENSMUST00000202355	polymorphic_pseudogene	principal1	6	-1	3144554	928
ENSMUSG00000071866	protein_coding	Ppia	ENSMUST00000137829	retained_intron		11	1	6415876	677
ENSMUSG00000037720	protein_coding	Tmem33	ENSMUST00000163028	retained_intron		5	1	67260896	985
ENSMUSG00000024663	protein_coding	Rab3il1	ENSMUST00000129882	retained_intron		19	1	10031670	850
ENSMUSG00000118110	processed_pseudogene	Gm50224	ENSMUST00000237308	processed_pseudogene		18	1	47809563	528
ENSMUSG00000034543	protein_coding	Morc2a	ENSMUST00000096441	protein_coding	principal1	11	1	3649191	5656
ENSMUSG00000071866	protein_coding	Ppia	ENSMUST00000155824	retained_intron		11	1	6415876	2853
ENSMUSG00000107185	processed_pseudogene	Gm42642	ENSMUST00000200683	processed_pseudogene		6	-1	3182984	355
ENSMUSG00000071866	protein_coding	Ppia	ENSMUST00000213200	protein_coding		11	1	6416312	1450
ENSMUSG00000107233	TEC	Gm42959	ENSMUST00000202184	TEC		6	1	3190691	212
ENSMUSG00000027009	protein_coding	Itga4	ENSMUST00000141094	processed_transcript		2	1	79255572	1508
ENSMUSG00000047497	protein_coding	Adamts12	ENSMUST00000061318	protein_coding	principal1	15	1	11064809	8579
ENSMUSG00000034543	protein_coding	Morc2a	ENSMUST00000140242	protein_coding		11	1	3649759	768
ENSMUSG00000100377	processed_pseudogene	Gm28369	ENSMUST00000188993	processed_pseudogene		Y	-1	87240429	315
ENSMUSG00000107601	processed_pseudogene	Gm2651	ENSMUST00000203560	processed_pseudogene		6	1	3207869	838
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000115043	protein_coding		5	-1	24445194	3056
ENSMUSG00000047497	protein_coding	Adamts12	ENSMUST00000228940	retained_intron		15	1	11064818	2289
ENSMUSG00000071138	protein_coding	Tex24	ENSMUST00000095375	protein_coding	principal1	8	1	27344394	1767
ENSMUSG00000118052	transcribed_processed_pseudogene	Gm50432	ENSMUST00000236294	processed_transcript		19	1	3205607	652
ENSMUSG00000117632	lincRNA	Gm50049	ENSMUST00000234702	lincRNA		18	-1	21318146	482
ENSMUSG00000118052	transcribed_processed_pseudogene	Gm50432	ENSMUST00000235308	transcribed_processed_pseudogene		19	1	3205793	278
ENSMUSG00000116617	lincRNA	Gm49767	ENSMUST00000232175	lincRNA		16	-1	31291896	3519
ENSMUSG00000023267	protein_coding	Gabrr2	ENSMUST00000108162	protein_coding	principal1	4	1	33062999	1933
ENSMUSG00000117357	transcribed_processed_pseudogene	AC158774.1	ENSMUST00000234125	transcribed_processed_pseudogene		18	1	21317805	436
ENSMUSG00000020224	protein_coding	Llph	ENSMUST00000020444	protein_coding	principal1	10	1	120227070	1664
ENSMUSG00000116297	processed_pseudogene	Gm49546	ENSMUST00000229200	processed_pseudogene		16	-1	31292809	280
ENSMUSG00000117357	transcribed_processed_pseudogene	AC158774.1	ENSMUST00000234791	processed_transcript		18	1	21318127	1430
ENSMUSG00000034543	protein_coding	Morc2a	ENSMUST00000126035	processed_transcript		11	1	3679907	859
ENSMUSG00000106955	processed_pseudogene	Gm42960	ENSMUST00000202160	processed_pseudogene		6	1	3230792	241
ENSMUSG00000023267	protein_coding	Gabrr2	ENSMUST00000131920	protein_coding		4	1	33078796	714
ENSMUSG00000109342	processed_pseudogene	Gm32983	ENSMUST00000208500	processed_pseudogene		7	1	67593659	505
ENSMUSG00000118267	sense_overlapping	G630055G22Rik	ENSMUST00000237558	sense_overlapping		18	1	47922841	1332
ENSMUSG00000034543	protein_coding	Morc2a	ENSMUST00000131517	processed_transcript		11	1	3680267	406
ENSMUSG00000118203	processed_pseudogene	Gm7798	ENSMUST00000236416	processed_pseudogene		19	1	3248804	1411
ENSMUSG00000109558	processed_pseudogene	Gm45100	ENSMUST00000209153	processed_pseudogene		7	1	67637765	391
ENSMUSG00000020224	protein_coding	Llph	ENSMUST00000220107	nonsense_mediated_decay		10	1	120227102	767
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238292	protein_coding	principal1	8	-1	69716837	6080
ENSMUSG00000023267	protein_coding	Gabrr2	ENSMUST00000147889	protein_coding		4	1	33081505	700
ENSMUSG00000110253	protein_coding	Olfr495	ENSMUST00000215215	protein_coding	principal1	7	1	108393167	2460
ENSMUSG00000034543	protein_coding	Morc2a	ENSMUST00000128666	processed_transcript		11	1	3680362	805
ENSMUSG00000118267	sense_overlapping	G630055G22Rik	ENSMUST00000236832	sense_overlapping		18	1	47983217	1446
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238201	protein_coding		8	-1	69708426	2646
ENSMUSG00000085772	lincRNA	D630024D03Rik	ENSMUST00000129425	lincRNA		11	-1	31824473	699
ENSMUSG00000020224	protein_coding	Llph	ENSMUST00000130198	protein_coding	principal1	10	1	120227186	1463
ENSMUSG00000023267	protein_coding	Gabrr2	ENSMUST00000024035	protein_coding		4	1	33063112	1820
ENSMUSG00000085772	lincRNA	D630024D03Rik	ENSMUST00000134944	lincRNA		11	-1	31824524	715
ENSMUSG00000100673	unprocessed_pseudogene	Gm29574	ENSMUST00000186226	unprocessed_pseudogene		Y	-1	75802627	696
ENSMUSG00000105627	TEC	Gm43548	ENSMUST00000197139	TEC		3	1	55574921	2353
ENSMUSG00000110253	protein_coding	Olfr495	ENSMUST00000210990	protein_coding	principal1	7	1	108394831	1440
ENSMUSG00000102025	processed_pseudogene	Gm29575	ENSMUST00000190597	processed_pseudogene		Y	-1	75839228	315
ENSMUSG00000085772	lincRNA	D630024D03Rik	ENSMUST00000126265	lincRNA		11	-1	31824473	720
ENSMUSG00000059040	protein_coding	Eno1b	ENSMUST00000076155	protein_coding	principal1	18	1	48045335	1791
ENSMUSG00000084261	processed_pseudogene	Rpl36a-ps4	ENSMUST00000121019	processed_pseudogene		2	1	72360247	296
ENSMUSG00000034543	protein_coding	Morc2a	ENSMUST00000093389	protein_coding	principal1	11	1	3649494	5085
ENSMUSG00000106334	lincRNA	Gm43549	ENSMUST00000198856	lincRNA		3	-1	55582730	2661
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238657	protein_coding	principal1	8	-1	69716824	3783
ENSMUSG00000059040	protein_coding	Eno1b	ENSMUST00000235307	protein_coding	principal1	18	1	48046647	1747
ENSMUSG00000099944	unprocessed_pseudogene	Gm21875	ENSMUST00000191195	unprocessed_pseudogene		Y	-1	75987423	696
ENSMUSG00000102255	unprocessed_pseudogene	Gm36891	ENSMUST00000191995	unprocessed_pseudogene		Y	1	20698839	655
ENSMUSG00000027009	protein_coding	Itga4	ENSMUST00000135919	processed_transcript		2	1	79255721	1826
ENSMUSG00000034201	protein_coding	Gas2l1	ENSMUST00000056649	protein_coding	principal3	11	-1	5065327	2847
ENSMUSG00000092427	unprocessed_pseudogene	Vmn1r-ps69	ENSMUST00000172759	unprocessed_pseudogene		7	1	13244162	201
ENSMUSG00000054052	protein_coding	Rdh19	ENSMUST00000077530	protein_coding	principal1	10	1	127849928	1889
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238418	protein_coding	principal1	8	-1	69716902	3180
ENSMUSG00000103365	lincRNA	Gm36929	ENSMUST00000195152	lincRNA		Y	1	20759357	166
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000165861	protein_coding	principal3	4	1	138217131	3361
ENSMUSG00000027009	protein_coding	Itga4	ENSMUST00000126312	processed_transcript		2	1	79255947	2936
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238753	protein_coding	principal1	8	-1	69716948	3199
ENSMUSG00000081284	processed_pseudogene	Gm13673	ENSMUST00000122056	processed_pseudogene		2	1	79359865	531
ENSMUSG00000086335	lincRNA	Gm12107	ENSMUST00000132857	lincRNA		11	1	31832660	889
ENSMUSG00000100226	unprocessed_pseudogene	Gm20904	ENSMUST00000190518	unprocessed_pseudogene		Y	-1	76061651	696
ENSMUSG00000101957	unprocessed_pseudogene	Gm29576	ENSMUST00000188020	unprocessed_pseudogene		Y	-1	76091239	678
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238408	protein_coding	principal1	8	-1	69716900	2792
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000097836	protein_coding	alternative2	4	1	138216627	3113
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238460	protein_coding		8	-1	69716486	882
ENSMUSG00000118097	processed_pseudogene	Gm5237	ENSMUST00000236601	processed_pseudogene		18	-1	48070022	1197
ENSMUSG00000028759	protein_coding	Hp1bp3	ENSMUST00000030541	protein_coding	principal3	4	1	138216627	3311
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238345	retained_intron		8	-1	69708783	705
ENSMUSG00000034201	protein_coding	Gas2l1	ENSMUST00000109895	protein_coding	principal3	11	-1	5065277	2530
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238761	protein_coding		8	-1	69716463	775
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238535	retained_intron		8	-1	69716454	728
ENSMUSG00000109126	unprocessed_pseudogene	Olfr1455-ps1	ENSMUST00000208608	unprocessed_pseudogene		19	1	13068907	771
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238459	retained_intron		8	-1	69716873	1555
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238367	processed_transcript		8	-1	69716859	528
ENSMUSG00000018761	protein_coding	Mpdu1	ENSMUST00000018905	protein_coding	principal1	11	-1	69662642	1321
ENSMUSG00000028497	protein_coding	Hacd4	ENSMUST00000132493	protein_coding		4	-1	88438915	2737
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000238311	processed_transcript		8	-1	69716983	311
ENSMUSG00000034201	protein_coding	Gas2l1	ENSMUST00000037146	protein_coding	alternative2	11	-1	5065300	2686
ENSMUSG00000115898	TEC	Gm49524	ENSMUST00000230853	TEC		15	1	40997960	1245
ENSMUSG00000054648	protein_coding	Zfp869	ENSMUST00000080987	protein_coding	principal1	8	-1	69710724	1590
ENSMUSG00000018761	protein_coding	Mpdu1	ENSMUST00000129224	protein_coding		11	-1	69662564	774
ENSMUSG00000034701	protein_coding	Neurod1	ENSMUST00000041099	protein_coding	principal1	2	-1	79456751	2729
ENSMUSG00000034201	protein_coding	Gas2l1	ENSMUST00000152257	protein_coding		11	-1	5065278	849
ENSMUSG00000022306	protein_coding	Zfpm2	ENSMUST00000229777	retained_intron		15	1	40655035	3006
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000149537	retained_intron		5	-1	24445186	3642
ENSMUSG00000029401	protein_coding	Rilpl2	ENSMUST00000031347	protein_coding	principal1	5	-1	124478366	1391
ENSMUSG00000034201	protein_coding	Gas2l1	ENSMUST00000122886	processed_transcript		11	-1	5065294	3571
ENSMUSG00000029401	protein_coding	Rilpl2	ENSMUST00000198413	retained_intron		5	-1	124478310	3065
ENSMUSG00000028497	protein_coding	Hacd4	ENSMUST00000151280	protein_coding		4	-1	88438928	4680
ENSMUSG00000085100	antisense	Gm13324	ENSMUST00000148607	antisense		2	1	17559060	569
ENSMUSG00000034201	protein_coding	Gas2l1	ENSMUST00000156196	processed_transcript		11	-1	5064851	2730
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000156731	protein_coding		2	-1	79338603	548
ENSMUSG00000034201	protein_coding	Gas2l1	ENSMUST00000151936	processed_transcript		11	-1	5065294	758
ENSMUSG00000099622	lincRNA	Gm29188	ENSMUST00000191173	lincRNA		1	1	151001040	767
ENSMUSG00000082402	processed_pseudogene	Gm15621	ENSMUST00000119162	processed_pseudogene		5	1	124472427	364
ENSMUSG00000039354	protein_coding	Smarcal1	ENSMUST00000133123	protein_coding		1	1	72583251	828
ENSMUSG00000028497	protein_coding	Hacd4	ENSMUST00000030221	protein_coding	principal1	4	-1	88438926	2089
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000177138	protein_coding	alternative2	11	1	69901816	4886
ENSMUSG00000018761	protein_coding	Mpdu1	ENSMUST00000148242	nonsense_mediated_decay		11	-1	69662587	971
ENSMUSG00000029034	protein_coding	Ints11	ENSMUST00000120794	protein_coding		4	1	155869546	1884
ENSMUSG00000018761	protein_coding	Mpdu1	ENSMUST00000149764	retained_intron		11	-1	69658280	867
ENSMUSG00000018761	protein_coding	Mpdu1	ENSMUST00000155200	protein_coding		11	-1	69662587	462
ENSMUSG00000102628	TEC	Gm37671	ENSMUST00000193198	TEC		1	1	151080450	2096
ENSMUSG00000087230	protein_coding	Mroh3	ENSMUST00000146112	processed_transcript		1	-1	136190712	942
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000132109	retained_intron		5	-1	24442215	828
ENSMUSG00000100595	processed_pseudogene	Gm19087	ENSMUST00000191430	processed_pseudogene		1	1	151107915	946
ENSMUSG00000087230	protein_coding	Mroh3	ENSMUST00000133030	retained_intron		1	-1	136182940	502
ENSMUSG00000018761	protein_coding	Mpdu1	ENSMUST00000125389	nonsense_mediated_decay		11	-1	69662518	646
ENSMUSG00000109931	lincRNA	Gm39929	ENSMUST00000209672	lincRNA		2	-1	128609630	693
ENSMUSG00000080789	processed_pseudogene	Gm14007	ENSMUST00000118288	processed_pseudogene		2	1	128606985	210
ENSMUSG00000083033	processed_pseudogene	Gm9083	ENSMUST00000120423	processed_pseudogene		X	1	20239469	819
ENSMUSG00000097426	processed_pseudogene	Gm8941	ENSMUST00000181451	processed_pseudogene		1	1	151136507	899
ENSMUSG00000018761	protein_coding	Mpdu1	ENSMUST00000127118	retained_intron		11	-1	69658253	664
ENSMUSG00000038368	protein_coding	Focad	ENSMUST00000161058	retained_intron		4	1	88094645	1430
ENSMUSG00000029034	protein_coding	Ints11	ENSMUST00000134678	processed_transcript		4	1	155869546	2197
ENSMUSG00000022306	protein_coding	Zfpm2	ENSMUST00000053467	protein_coding	principal1	15	1	40655035	4981
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000144389	nonsense_mediated_decay		5	-1	24445206	1610
ENSMUSG00000118560	protein_coding	Lim2	ENSMUST00000004732	protein_coding	principal1	7	1	43430088	884
ENSMUSG00000034209	protein_coding	Rasl10a	ENSMUST00000037218	protein_coding	principal1	11	1	5058128	1110
ENSMUSG00000018761	protein_coding	Mpdu1	ENSMUST00000137288	retained_intron		11	-1	69662504	524
ENSMUSG00000018761	protein_coding	Mpdu1	ENSMUST00000139155	retained_intron		11	-1	69662560	510
ENSMUSG00000022306	protein_coding	Zfpm2	ENSMUST00000230723	retained_intron		15	1	40655351	1607
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000108617	protein_coding	alternative2	11	1	69901816	4892
ENSMUSG00000087230	protein_coding	Mroh3	ENSMUST00000168561	nonsense_mediated_decay		1	-1	136211403	2705
ENSMUSG00000118553	protein_coding	Gm38999	ENSMUST00000239023	protein_coding	principal1	7	1	43427686	558
ENSMUSG00000034209	protein_coding	Rasl10a	ENSMUST00000126974	processed_transcript		11	1	5058966	693
ENSMUSG00000022306	protein_coding	Zfpm2	ENSMUST00000230319	protein_coding		15	1	40664990	5791
ENSMUSG00000018761	protein_coding	Mpdu1	ENSMUST00000153217	retained_intron		11	-1	69659405	818
ENSMUSG00000087230	protein_coding	Mroh3	ENSMUST00000212798	protein_coding	principal1	1	-1	136212828	2933
ENSMUSG00000115975	TEC	Gm49526	ENSMUST00000229850	TEC		15	1	40959757	3945
ENSMUSG00000101002	lincRNA	Gm28944	ENSMUST00000188946	lincRNA		Y	1	51697441	356
ENSMUSG00000116397	TEC	Gm49525	ENSMUST00000230162	TEC		15	1	40907565	1423
ENSMUSG00000049685	protein_coding	Cyp2g1	ENSMUST00000040944	protein_coding	principal1	7	1	26808892	1896
ENSMUSG00000026259	protein_coding	Ngef	ENSMUST00000027477	protein_coding	alternative2	1	-1	87510362	2746
ENSMUSG00000087230	protein_coding	Mroh3	ENSMUST00000166708	processed_transcript		1	-1	136199598	731
ENSMUSG00000101019	unprocessed_pseudogene	Gm28943	ENSMUST00000186187	unprocessed_pseudogene		Y	-1	51710712	615
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000156499	retained_intron		1	-1	75487233	656
ENSMUSG00000093639	protein_coding	Lim2	ENSMUST00000177375	nonsense_mediated_decay	principal1	7	1	43427670	2180
ENSMUSG00000049685	protein_coding	Cyp2g1	ENSMUST00000205273	retained_intron		7	1	26816295	472
ENSMUSG00000036534	protein_coding	Slc38a7	ENSMUST00000040481	protein_coding	principal1	8	-1	95853539	3333
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000028080	protein_coding	principal1	2	-1	17731043	5780
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000030800	protein_coding	principal1	5	-1	24445287	1893
ENSMUSG00000030730	protein_coding	Atp2a1	ENSMUST00000032974	protein_coding	principal1	7	-1	126463108	3477
ENSMUSG00000039354	protein_coding	Smarcal1	ENSMUST00000152814	retained_intron		1	1	72583251	1754
ENSMUSG00000029034	protein_coding	Ints11	ENSMUST00000030901	protein_coding	principal1	4	1	155869546	2368
ENSMUSG00000024816	protein_coding	Frmd8	ENSMUST00000025728	protein_coding	principal1	19	-1	5875274	4504
ENSMUSG00000067482	unprocessed_pseudogene	Olfr1456-ps1	ENSMUST00000087769	unprocessed_pseudogene		19	-1	13079335	518
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000177476	protein_coding	alternative2	11	1	69901816	4952
ENSMUSG00000030730	protein_coding	Atp2a1	ENSMUST00000146973	protein_coding		7	-1	126447645	681
ENSMUSG00000036534	protein_coding	Slc38a7	ENSMUST00000212270	protein_coding	principal1	8	-1	95853539	3315
ENSMUSG00000029034	protein_coding	Ints11	ENSMUST00000149458	retained_intron		4	1	155869567	340
ENSMUSG00000024816	protein_coding	Frmd8	ENSMUST00000133729	retained_intron		19	-1	5863682	738
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000151900	retained_intron		5	-1	24441524	411
ENSMUSG00000026259	protein_coding	Ngef	ENSMUST00000068681	protein_coding	principal4	1	-1	87573870	3109
ENSMUSG00000036534	protein_coding	Slc38a7	ENSMUST00000142881	retained_intron		8	-1	95841679	726
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000149085	retained_intron		5	-1	24445187	2552
ENSMUSG00000039354	protein_coding	Smarcal1	ENSMUST00000156797	retained_intron		1	1	72583251	2237
ENSMUSG00000024816	protein_coding	Frmd8	ENSMUST00000145026	retained_intron		19	-1	5873430	700
ENSMUSG00000037974	protein_coding	Muc5ac	ENSMUST00000155534	protein_coding	alternative2	7	1	141788972	10752
ENSMUSG00000020737	protein_coding	Jpt1	ENSMUST00000021083	protein_coding	principal1	11	-1	115514387	1375
ENSMUSG00000029034	protein_coding	Ints11	ENSMUST00000156460	nonsense_mediated_decay		4	1	155869615	880
ENSMUSG00000036534	protein_coding	Slc38a7	ENSMUST00000212628	protein_coding		8	-1	95853522	1382
ENSMUSG00000026259	protein_coding	Ngef	ENSMUST00000168235	protein_coding		1	-1	87486177	1110
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000115041	protein_coding		5	-1	24445208	1399
ENSMUSG00000047109	protein_coding	Cldn14	ENSMUST00000050962	protein_coding	principal1	16	-1	94008837	1457
ENSMUSG00000044763	protein_coding	Trmt10c	ENSMUST00000059052	protein_coding	principal1	16	-1	56037819	3002
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000061837	protein_coding	principal3	11	1	69901891	5188
ENSMUSG00000036534	protein_coding	Slc38a7	ENSMUST00000153835	retained_intron		8	-1	95843853	540
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000144866	retained_intron		5	-1	24442101	474
ENSMUSG00000029034	protein_coding	Ints11	ENSMUST00000135844	retained_intron		4	1	155887779	481
ENSMUSG00000024816	protein_coding	Frmd8	ENSMUST00000155227	protein_coding		19	-1	5875239	768
ENSMUSG00000050530	protein_coding	Fam171a1	ENSMUST00000072955	protein_coding	alternative2	2	1	3114224	3364
ENSMUSG00000037974	protein_coding	Muc5ac	ENSMUST00000041924	protein_coding	principal2	7	1	141789011	8256
ENSMUSG00000029034	protein_coding	Ints11	ENSMUST00000132632	retained_intron		4	1	155888123	517
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000134958	processed_transcript		5	-1	24442298	430
ENSMUSG00000026259	protein_coding	Ngef	ENSMUST00000166463	retained_intron		1	-1	87486217	735
ENSMUSG00000091123	processed_pseudogene	Gm17181	ENSMUST00000168856	processed_pseudogene		1	1	87514175	123
ENSMUSG00000043488	antisense	Frmd8os	ENSMUST00000187697	antisense		19	1	5845623	516
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000132498	retained_intron		5	-1	24443958	856
ENSMUSG00000037974	protein_coding	Muc5ac	ENSMUST00000163321	protein_coding	alternative2	7	1	141789011	8505
ENSMUSG00000047109	protein_coding	Cldn14	ENSMUST00000142083	protein_coding		16	-1	93929567	548
ENSMUSG00000051557	protein_coding	Pusl1	ENSMUST00000123504	processed_transcript		4	-1	155889513	714
ENSMUSG00000043488	antisense	Frmd8os	ENSMUST00000135347	antisense		19	1	5848508	468
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000139307	processed_transcript		5	-1	24445238	811
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000177160	retained_intron		11	1	69902027	1438
ENSMUSG00000047109	protein_coding	Cldn14	ENSMUST00000137163	protein_coding		16	-1	93929817	680
ENSMUSG00000100243	lincRNA	Gm28367	ENSMUST00000187942	lincRNA		Y	1	87277136	1496
ENSMUSG00000039354	protein_coding	Smarcal1	ENSMUST00000136498	retained_intron		1	1	72583251	2818
ENSMUSG00000030727	protein_coding	Rabep2	ENSMUST00000151304	retained_intron		7	1	126428759	2782
ENSMUSG00000047109	protein_coding	Cldn14	ENSMUST00000232406	processed_transcript		16	-1	93942384	279
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000175742	processed_transcript		11	1	69902156	568
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000123144	retained_intron		5	-1	24445208	800
ENSMUSG00000100243	lincRNA	Gm28367	ENSMUST00000189803	lincRNA		Y	1	87277588	437
ENSMUSG00000047109	protein_coding	Cldn14	ENSMUST00000169391	protein_coding	principal1	16	-1	93929817	1456
ENSMUSG00000025479	protein_coding	Cyp2e1	ENSMUST00000026552	protein_coding	principal1	7	1	140763739	1833
ENSMUSG00000047109	protein_coding	Cldn14	ENSMUST00000177648	protein_coding	principal1	16	-1	93929567	1266
ENSMUSG00000025479	protein_coding	Cyp2e1	ENSMUST00000209253	protein_coding		7	1	140763819	1582
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000133203	nonsense_mediated_decay		11	1	69903392	3938
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000099974	processed_transcript		2	-1	79428954	2604
ENSMUSG00000020361	protein_coding	Hspa4	ENSMUST00000020630	protein_coding	principal1	11	-1	53300457	4618
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000147402	processed_transcript		2	-1	79333682	359
ENSMUSG00000025479	protein_coding	Cyp2e1	ENSMUST00000210235	protein_coding		7	1	140763845	1012
ENSMUSG00000116681	sense_intronic	Gm49618	ENSMUST00000231886	sense_intronic		16	-1	93982552	376
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000131946	processed_transcript		5	-1	24445197	473
ENSMUSG00000026866	protein_coding	Kynu	ENSMUST00000028223	protein_coding	principal1	2	1	43555329	2733
ENSMUSG00000099596	processed_pseudogene	Zbed4-ps3	ENSMUST00000187149	processed_pseudogene		7	-1	13966215	3244
ENSMUSG00000116681	sense_intronic	Gm49618	ENSMUST00000232110	sense_intronic		16	-1	93982588	376
ENSMUSG00000114888	TEC	Gm49616	ENSMUST00000225718	TEC		14	1	27238062	2433
ENSMUSG00000028959	protein_coding	Fastk	ENSMUST00000130577	processed_transcript		5	-1	24445197	481
ENSMUSG00000079434	protein_coding	Neu2	ENSMUST00000166055	protein_coding		1	1	87509889	672
ENSMUSG00000069805	protein_coding	Fbp1	ENSMUST00000092888	protein_coding	principal1	13	-1	62888282	1479
ENSMUSG00000020737	protein_coding	Jpt1	ENSMUST00000139980	processed_transcript		11	-1	115514148	650
ENSMUSG00000116947	lincRNA	2410003I16Rik	ENSMUST00000231382	lincRNA		16	1	94011441	452
ENSMUSG00000025479	protein_coding	Cyp2e1	ENSMUST00000210403	retained_intron		7	1	140764481	569
ENSMUSG00000026866	protein_coding	Kynu	ENSMUST00000112826	protein_coding		2	1	43555342	1587
ENSMUSG00000020361	protein_coding	Hspa4	ENSMUST00000139322	retained_intron		11	-1	53267241	630
ENSMUSG00000082459	processed_pseudogene	Gm11988	ENSMUST00000122321	processed_pseudogene		11	-1	8114094	1069
ENSMUSG00000020737	protein_coding	Jpt1	ENSMUST00000145104	processed_transcript		11	-1	115514348	597
ENSMUSG00000069805	protein_coding	Fbp1	ENSMUST00000150013	protein_coding		13	-1	62872758	612
ENSMUSG00000026866	protein_coding	Kynu	ENSMUST00000050511	protein_coding		2	1	43555354	2778
ENSMUSG00000037341	protein_coding	Slc9a7	ENSMUST00000224372	protein_coding		X	-1	20162200	1151
ENSMUSG00000069805	protein_coding	Fbp1	ENSMUST00000134814	nonsense_mediated_decay		13	-1	62888127	704
ENSMUSG00000026866	protein_coding	Kynu	ENSMUST00000138540	processed_transcript		2	1	43555329	621
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000129475	nonsense_mediated_decay		11	1	69904035	1850
ENSMUSG00000020737	protein_coding	Jpt1	ENSMUST00000155399	processed_transcript		11	-1	115514371	696
ENSMUSG00000026866	protein_coding	Kynu	ENSMUST00000130968	processed_transcript		2	1	43599615	838
ENSMUSG00000020737	protein_coding	Jpt1	ENSMUST00000142238	processed_transcript		11	-1	115514116	561
ENSMUSG00000074377	protein_coding	Sult2a4	ENSMUST00000108520	protein_coding	alternative2	7	-1	13989607	984
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000153041	retained_intron		11	1	69907264	752
ENSMUSG00000026866	protein_coding	Kynu	ENSMUST00000148855	processed_transcript		2	1	43670930	874
ENSMUSG00000074377	protein_coding	Sult2a4	ENSMUST00000165167	protein_coding	principal2	7	-1	13989588	964
ENSMUSG00000020361	protein_coding	Hspa4	ENSMUST00000151854	processed_transcript		11	-1	53300411	3075
ENSMUSG00000079434	protein_coding	Neu2	ENSMUST00000166259	protein_coding	principal3	1	1	87574027	1596
ENSMUSG00000102095	lincRNA	C730036E19Rik	ENSMUST00000188305	lincRNA		1	1	151138034	1102
ENSMUSG00000028033	protein_coding	Kcnq5	ENSMUST00000029667	protein_coding	principal3	1	-1	21961581	6562
ENSMUSG00000101902	unprocessed_pseudogene	Gm29115	ENSMUST00000189870	unprocessed_pseudogene		Y	-1	87410978	615
ENSMUSG00000051557	protein_coding	Pusl1	ENSMUST00000097737	protein_coding	principal1	4	-1	155891781	1243
ENSMUSG00000117590	processed_pseudogene	Gm50052	ENSMUST00000234999	processed_pseudogene		18	-1	21332679	368
ENSMUSG00000070808	protein_coding	Bicra	ENSMUST00000210713	retained_intron		7	-1	15988405	6623
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000143861	retained_intron		11	1	69908635	758
ENSMUSG00000028033	protein_coding	Kcnq5	ENSMUST00000115300	protein_coding	alternative2	1	-1	21961942	6975
ENSMUSG00000117386	processed_pseudogene	Gm4837	ENSMUST00000234227	processed_pseudogene		18	-1	21494099	1584
ENSMUSG00000102132	unprocessed_pseudogene	Gm21813	ENSMUST00000191291	unprocessed_pseudogene		Y	-1	87447864	696
ENSMUSG00000083956	processed_pseudogene	Gm12361	ENSMUST00000119806	processed_pseudogene		4	1	34919129	1044
ENSMUSG00000038624	protein_coding	Nepn	ENSMUST00000219730	protein_coding		10	1	52388972	753
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000175761	retained_intron		11	1	69908976	734
ENSMUSG00000083055	processed_pseudogene	Gm14140	ENSMUST00000119999	processed_pseudogene		2	-1	150111576	995
ENSMUSG00000098348	protein_coding	Btg1c	ENSMUST00000184452	transcribed_unprocessed_pseudogene		X	-1	38043114	1194
ENSMUSG00000047284	protein_coding	Neurl4	ENSMUST00000132183	protein_coding		11	1	69911036	675
ENSMUSG00000079434	protein_coding	Neu2	ENSMUST00000163606	protein_coding		1	1	87574046	423
ENSMUSG00000051557	protein_coding	Pusl1	ENSMUST00000129637	retained_intron		4	-1	155891209	598
ENSMUSG00000028033	protein_coding	Kcnq5	ENSMUST00000173058	protein_coding		1	-1	21961581	2472
ENSMUSG00000098348	protein_coding	Btg1c	ENSMUST00000184977	processed_transcript		X	-1	38039809	701
ENSMUSG00000050530	protein_coding	Fam171a1	ENSMUST00000115099	protein_coding	principal3	2	1	3118382	4149
ENSMUSG00000098348	protein_coding	Btg1c	ENSMUST00000089060	protein_coding	principal1	X	-1	38043114	1194
ENSMUSG00000064110	protein_coding	Olfr963	ENSMUST00000215649	protein_coding	principal1	9	1	39667205	2203
ENSMUSG00000064110	protein_coding	Olfr963	ENSMUST00000073433	protein_coding	principal1	9	1	39669059	936
ENSMUSG00000050530	protein_coding	Fam171a1	ENSMUST00000091505	protein_coding		2	1	3118413	3449
ENSMUSG00000051557	protein_coding	Pusl1	ENSMUST00000142724	retained_intron		4	-1	155891726	883
ENSMUSG00000079434	protein_coding	Neu2	ENSMUST00000164128	protein_coding	alternative2	1	1	87584037	1733
ENSMUSG00000050530	protein_coding	Fam171a1	ENSMUST00000062934	protein_coding	alternative2	2	1	3118685	4129
ENSMUSG00000117886	processed_pseudogene	Gm2106	ENSMUST00000237524	processed_pseudogene		19	-1	3255067	1550
ENSMUSG00000079645	sense_intronic	Gm17193	ENSMUST00000116345	sense_intronic		12	-1	84923512	691
ENSMUSG00000050473	protein_coding	Slc35d3	ENSMUST00000059805	protein_coding	principal1	10	-1	19851459	2630
ENSMUSG00000048038	protein_coding	Ccdc187	ENSMUST00000217256	protein_coding	alternative2	2	-1	26294438	9411
ENSMUSG00000027088	protein_coding	Phospho2	ENSMUST00000151298	protein_coding		2	1	69789623	667
ENSMUSG00000028033	protein_coding	Kcnq5	ENSMUST00000174183	nonsense_mediated_decay		1	-1	21961581	2648
ENSMUSG00000028033	protein_coding	Kcnq5	ENSMUST00000173404	protein_coding	alternative2	1	-1	21961581	2775
ENSMUSG00000079434	protein_coding	Neu2	ENSMUST00000165109	protein_coding	principal3	1	1	87594550	1824
ENSMUSG00000048038	protein_coding	Ccdc187	ENSMUST00000227200	protein_coding	alternative2	2	-1	26294438	9528
ENSMUSG00000099744	processed_pseudogene	Tmem167-ps3	ENSMUST00000186718	processed_pseudogene		7	1	14006658	178
ENSMUSG00000051557	protein_coding	Pusl1	ENSMUST00000150446	retained_intron		4	-1	155891755	673
ENSMUSG00000038624	protein_coding	Nepn	ENSMUST00000067085	protein_coding	principal1	10	1	52391608	1844
ENSMUSG00000082709	processed_pseudogene	Gm12362	ENSMUST00000121986	processed_pseudogene		4	-1	34941349	342
ENSMUSG00000028033	protein_coding	Kcnq5	ENSMUST00000115299	retained_intron		1	-1	21961665	1472
ENSMUSG00000070808	protein_coding	Bicra	ENSMUST00000210781	protein_coding	principal1	7	-1	16047921	5975
ENSMUSG00000051557	protein_coding	Pusl1	ENSMUST00000142566	processed_transcript		4	-1	155891769	508
ENSMUSG00000028033	protein_coding	Kcnq5	ENSMUST00000134505	processed_transcript		1	-1	21855902	662
ENSMUSG00000051557	protein_coding	Pusl1	ENSMUST00000130146	retained_intron		4	-1	155891728	462
ENSMUSG00000048038	protein_coding	Ccdc187	ENSMUST00000057224	protein_coding	principal2	2	-1	26294557	3148
ENSMUSG00000070808	protein_coding	Bicra	ENSMUST00000209251	processed_transcript		7	-1	15978725	665
ENSMUSG00000079434	protein_coding	Neu2	ENSMUST00000070898	protein_coding	principal3	1	1	87594550	1570
ENSMUSG00000082935	processed_pseudogene	Gm7658	ENSMUST00000119064	processed_pseudogene		1	-1	21513056	1124
ENSMUSG00000032118	protein_coding	Fez1	ENSMUST00000162633	protein_coding		9	1	36821864	927
ENSMUSG00000070808	protein_coding	Bicra	ENSMUST00000094821	protein_coding	principal1	7	-1	15999495	5360
ENSMUSG00000104138	TEC	Gm36949	ENSMUST00000192487	TEC		1	-1	21457017	2327
ENSMUSG00000079434	protein_coding	Neu2	ENSMUST00000172222	protein_coding	alternative2	1	1	87574027	1715
ENSMUSG00000019762	protein_coding	Iyd	ENSMUST00000019896	protein_coding	principal1	10	1	3540240	1579
ENSMUSG00000028557	protein_coding	Rnf11	ENSMUST00000030284	protein_coding	principal1	4	-1	109476675	4061
ENSMUSG00000061637	protein_coding	Olfr1457	ENSMUST00000214561	protein_coding		19	-1	13097571	1829
ENSMUSG00000090994	processed_pseudogene	Gm6153	ENSMUST00000172004	processed_pseudogene		1	-1	87544692	1058
ENSMUSG00000109984	lincRNA	Gm38948	ENSMUST00000210035	lincRNA		7	1	15971883	688
ENSMUSG00000061637	protein_coding	Olfr1457	ENSMUST00000215229	protein_coding	principal1	19	-1	13097891	2538
ENSMUSG00000083553	processed_pseudogene	Gm11989	ENSMUST00000117240	processed_pseudogene		11	-1	8383853	672
ENSMUSG00000019762	protein_coding	Iyd	ENSMUST00000141745	retained_intron		10	1	3540288	727
ENSMUSG00000114118	lincRNA	Gm48829	ENSMUST00000221183	lincRNA		13	-1	18645349	2705
ENSMUSG00000061637	protein_coding	Olfr1457	ENSMUST00000208913	protein_coding		19	-1	13097812	440
ENSMUSG00000074375	protein_coding	Sult2a3	ENSMUST00000098809	protein_coding	principal1	7	-1	14123044	1018
ENSMUSG00000089815	lincRNA	Gm5083	ENSMUST00000163056	lincRNA		13	1	44121167	1204
ENSMUSG00000028557	protein_coding	Rnf11	ENSMUST00000064167	protein_coding	principal1	4	-1	109476983	1955
ENSMUSG00000061637	protein_coding	Olfr1457	ENSMUST00000075170	protein_coding	principal1	19	-1	13095646	954
ENSMUSG00000106945	processed_pseudogene	Gm42961	ENSMUST00000202023	processed_pseudogene		6	1	3277553	181
ENSMUSG00000089815	lincRNA	Gm5083	ENSMUST00000159595	lincRNA		13	1	44121294	1095
ENSMUSG00000114024	bidirectional_promoter_lncRNA	Gm46336	ENSMUST00000221894	bidirectional_promoter_lncRNA		12	-1	17348373	279
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000075281	protein_coding	alternative1	12	1	111574523	3321
ENSMUSG00000081279	unprocessed_pseudogene	Vmn1r-ps2	ENSMUST00000118464	unprocessed_pseudogene		4	-1	3104592	834
ENSMUSG00000028557	protein_coding	Rnf11	ENSMUST00000145980	protein_coding		4	-1	109484728	663
ENSMUSG00000113458	lincRNA	Gm33684	ENSMUST00000221119	lincRNA		13	1	44150595	263
ENSMUSG00000062844	protein_coding	Olfr1458	ENSMUST00000215160	protein_coding	principal5	19	-1	13106775	1914
ENSMUSG00000062844	protein_coding	Olfr1458	ENSMUST00000076729	protein_coding	alternative2	19	-1	13103284	906
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000143974	protein_coding	principal1	2	-1	79428891	1623
ENSMUSG00000113186	lincRNA	A330076C08Rik	ENSMUST00000220765	lincRNA		13	-1	44216434	5020
ENSMUSG00000106779	lincRNA	Gm8579	ENSMUST00000201943	lincRNA		6	1	3288519	733
ENSMUSG00000073774	protein_coding	Kncn	ENSMUST00000097918	protein_coding	principal1	4	1	115884400	951
ENSMUSG00000083742	unprocessed_pseudogene	Vmn1r-ps3	ENSMUST00000122439	unprocessed_pseudogene		4	-1	3140057	917
ENSMUSG00000107184	processed_pseudogene	Gm18222	ENSMUST00000202416	processed_pseudogene		6	1	3318530	1387
ENSMUSG00000021794	protein_coding	Glud1	ENSMUST00000022322	protein_coding	principal1	14	1	34310727	3390
ENSMUSG00000113186	lincRNA	A330076C08Rik	ENSMUST00000223513	lincRNA		13	-1	44216487	1937
ENSMUSG00000113727	lincRNA	Gm47781	ENSMUST00000221767	lincRNA		13	1	44232398	603
ENSMUSG00000115072	protein_coding	Vmn1r2	ENSMUST00000226198	protein_coding	principal1	4	1	3167320	1126
ENSMUSG00000073774	protein_coding	Kncn	ENSMUST00000128222	processed_transcript		4	1	115885873	2032
ENSMUSG00000037341	protein_coding	Slc9a7	ENSMUST00000072451	protein_coding	principal2	X	-1	20291807	2512
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000152549	processed_transcript		2	-1	79428891	1534
ENSMUSG00000021794	protein_coding	Glud1	ENSMUST00000162912	retained_intron		14	1	34328662	834
ENSMUSG00000043168	antisense	4930426D05Rik	ENSMUST00000144487	antisense		18	1	21651448	1393
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000143602	processed_transcript		2	-1	79428907	1354
ENSMUSG00000114863	lincRNA	Gm48824	ENSMUST00000225398	lincRNA		13	-1	67308907	1038
ENSMUSG00000115072	protein_coding	Vmn1r2	ENSMUST00000105160	protein_coding	principal1	4	1	3172083	921
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000123859	processed_transcript		2	-1	79428997	1574
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000153602	processed_transcript		2	-1	79456785	1334
ENSMUSG00000021895	protein_coding	Arhgef3	ENSMUST00000225949	protein_coding		14	1	27114899	3198
ENSMUSG00000107017	TEC	Gm43196	ENSMUST00000201762	TEC		6	-1	3327855	2114
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000156830	processed_transcript		2	-1	79370865	367
ENSMUSG00000028716	protein_coding	Pdzk1ip1	ENSMUST00000106548	protein_coding	principal3	4	1	115088723	887
ENSMUSG00000043168	antisense	4930426D05Rik	ENSMUST00000132729	antisense		18	1	21651565	655
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000130499	processed_transcript		2	-1	79370890	610
ENSMUSG00000021794	protein_coding	Glud1	ENSMUST00000159784	processed_transcript		14	1	34332199	699
ENSMUSG00000043168	antisense	4930426D05Rik	ENSMUST00000143378	antisense		18	1	21652560	1295
ENSMUSG00000021895	protein_coding	Arhgef3	ENSMUST00000049206	protein_coding	principal2	14	1	27238039	3585
ENSMUSG00000094410	protein_coding	Gm38394	ENSMUST00000179598	protein_coding	principal1	1	-1	133661318	10156
ENSMUSG00000021794	protein_coding	Glud1	ENSMUST00000163955	protein_coding		14	1	34334266	432
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000145766	processed_transcript		2	-1	79391139	1887
ENSMUSG00000115466	protein_coding	Vmn1r3	ENSMUST00000105159	protein_coding	principal1	4	-1	3185358	1011
ENSMUSG00000043168	antisense	4930426D05Rik	ENSMUST00000139804	antisense		18	1	21652563	1650
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000160244	protein_coding		12	1	38779380	2032
ENSMUSG00000028716	protein_coding	Pdzk1ip1	ENSMUST00000030488	protein_coding	principal3	4	1	115088723	1119
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000169964	retained_intron		11	1	120672973	505
ENSMUSG00000075256	protein_coding	Cerkl	ENSMUST00000152413	processed_transcript		2	-1	79393034	462
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000084953	protein_coding	principal4	12	1	111574527	3365
ENSMUSG00000021794	protein_coding	Glud1	ENSMUST00000161593	processed_transcript		14	1	34335372	655
ENSMUSG00000037341	protein_coding	Slc9a7	ENSMUST00000151845	retained_intron		X	-1	20291786	1295
ENSMUSG00000021895	protein_coding	Arhgef3	ENSMUST00000224981	protein_coding	alternative1	14	1	27336066	3618
ENSMUSG00000027088	protein_coding	Phospho2	ENSMUST00000028494	protein_coding	principal1	2	1	69789636	2260
ENSMUSG00000034185	protein_coding	6430628N08Rik	ENSMUST00000132221	protein_coding	principal1	4	1	115890665	1605
ENSMUSG00000116939	processed_pseudogene	Gm49619	ENSMUST00000232441	processed_pseudogene		16	1	94015942	383
ENSMUSG00000037341	protein_coding	Slc9a7	ENSMUST00000115393	protein_coding	alternative2	X	-1	20291770	2152
ENSMUSG00000071256	protein_coding	Zfp213	ENSMUST00000095606	protein_coding	principal1	17	-1	23564238	2686
ENSMUSG00000021895	protein_coding	Arhgef3	ENSMUST00000225494	processed_transcript		14	1	27361389	572
ENSMUSG00000116569	bidirectional_promoter_lncRNA	Gm49620	ENSMUST00000231710	bidirectional_promoter_lncRNA		16	-1	94083866	2216
ENSMUSG00000034185	protein_coding	6430628N08Rik	ENSMUST00000165938	protein_coding		4	1	115890666	1602
ENSMUSG00000114349	processed_pseudogene	Gm7591	ENSMUST00000225776	processed_pseudogene		14	1	27210397	853
ENSMUSG00000027088	protein_coding	Phospho2	ENSMUST00000112266	protein_coding	principal1	2	1	69789650	2194
ENSMUSG00000050742	protein_coding	Olfr164	ENSMUST00000216157	protein_coding	principal1	16	-1	19314064	2792
ENSMUSG00000082286	transcribed_unprocessed_pseudogene	Pisd-ps1	ENSMUST00000145164	processed_transcript		11	1	3125904	789
ENSMUSG00000028393	protein_coding	Alad	ENSMUST00000137448	processed_transcript		4	-1	62519881	1769
ENSMUSG00000105787	processed_pseudogene	Gm8099	ENSMUST00000200510	processed_pseudogene		5	1	137928275	742
ENSMUSG00000028716	protein_coding	Pdzk1ip1	ENSMUST00000146578	processed_transcript		4	1	115090932	804
ENSMUSG00000117322	antisense	6330415G19Rik	ENSMUST00000233076	antisense		17	1	23550799	1624
ENSMUSG00000028716	protein_coding	Pdzk1ip1	ENSMUST00000139710	processed_transcript		4	1	115090187	670
ENSMUSG00000082286	transcribed_unprocessed_pseudogene	Pisd-ps1	ENSMUST00000132408	processed_transcript		11	1	3125936	659
ENSMUSG00000027088	protein_coding	Phospho2	ENSMUST00000131100	processed_transcript		2	1	69789660	415
ENSMUSG00000050742	protein_coding	Olfr164	ENSMUST00000056727	protein_coding	principal1	16	-1	19286837	1095
ENSMUSG00000028716	protein_coding	Pdzk1ip1	ENSMUST00000124491	processed_transcript		4	1	115089043	375
ENSMUSG00000037341	protein_coding	Slc9a7	ENSMUST00000130938	retained_intron		X	-1	20291807	1578
ENSMUSG00000067882	polymorphic_pseudogene	Casp16	ENSMUST00000182769	polymorphic_pseudogene		17	-1	23555704	1477
ENSMUSG00000027088	protein_coding	Phospho2	ENSMUST00000128765	processed_transcript		2	1	69789712	1133
ENSMUSG00000028716	protein_coding	Pdzk1ip1	ENSMUST00000149245	processed_transcript		4	1	115090254	361
ENSMUSG00000030727	protein_coding	Rabep2	ENSMUST00000106407	protein_coding	principal2	7	1	126429066	2234
ENSMUSG00000027088	protein_coding	Phospho2	ENSMUST00000180290	protein_coding	principal1	2	1	69790972	3267
ENSMUSG00000044442	protein_coding	N6amt1	ENSMUST00000054442	protein_coding	principal1	16	1	87354185	1884
ENSMUSG00000082286	transcribed_unprocessed_pseudogene	Pisd-ps1	ENSMUST00000119128	transcribed_unprocessed_pseudogene		11	1	3126006	1235
ENSMUSG00000108353	TEC	Gm45205	ENSMUST00000205745	TEC		7	1	127993269	3330
ENSMUSG00000055053	protein_coding	Nfic	ENSMUST00000105321	protein_coding	alternative1	10	-1	81427187	6237
ENSMUSG00000067882	polymorphic_pseudogene	Casp16	ENSMUST00000088673	protein_coding	principal1	17	-1	23553488	531
ENSMUSG00000082286	transcribed_unprocessed_pseudogene	Pisd-ps1	ENSMUST00000152828	processed_transcript		11	1	3128972	715
ENSMUSG00000032118	protein_coding	Fez1	ENSMUST00000034630	protein_coding	principal1	9	1	36832684	1794
ENSMUSG00000030727	protein_coding	Rabep2	ENSMUST00000141764	retained_intron		7	1	126429099	742
ENSMUSG00000021243	protein_coding	Fcf1	ENSMUST00000021669	protein_coding	principal1	12	1	84970897	749
ENSMUSG00000081857	processed_pseudogene	Gm13624	ENSMUST00000120263	processed_pseudogene		2	-1	69799612	462
ENSMUSG00000082820	processed_pseudogene	Gm13803	ENSMUST00000117547	processed_pseudogene		2	-1	97949679	489
ENSMUSG00000113438	processed_pseudogene	Gm47369	ENSMUST00000221651	processed_pseudogene		12	1	41684394	325
ENSMUSG00000028716	protein_coding	Pdzk1ip1	ENSMUST00000171877	protein_coding	alternative2	4	1	115088708	1129
ENSMUSG00000113454	antisense	Gm47373	ENSMUST00000221495	antisense		12	-1	41391216	784
ENSMUSG00000032118	protein_coding	Fez1	ENSMUST00000214772	protein_coding		9	1	36832764	419
ENSMUSG00000085180	lincRNA	AI838599	ENSMUST00000141405	lincRNA		4	1	3242055	284
ENSMUSG00000085180	lincRNA	AI838599	ENSMUST00000136306	lincRNA		4	1	3242437	525
ENSMUSG00000042514	protein_coding	Klhl14	ENSMUST00000122333	protein_coding	principal1	18	-1	21654718	4423
ENSMUSG00000021243	protein_coding	Fcf1	ENSMUST00000171040	protein_coding		12	1	84970981	731
ENSMUSG00000044442	protein_coding	N6amt1	ENSMUST00000118310	protein_coding		16	1	87354227	1700
ENSMUSG00000032118	protein_coding	Fez1	ENSMUST00000216539	processed_transcript		9	1	36832808	303
ENSMUSG00000028716	protein_coding	Pdzk1ip1	ENSMUST00000177647	protein_coding	principal3	4	1	115088708	826
ENSMUSG00000085180	lincRNA	AI838599	ENSMUST00000133960	lincRNA		4	1	3246005	2953
ENSMUSG00000030727	protein_coding	Rabep2	ENSMUST00000150530	nonsense_mediated_decay		7	1	126429382	577
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000124270	protein_coding		2	-1	17460932	8079
ENSMUSG00000032118	protein_coding	Fez1	ENSMUST00000161500	protein_coding		9	1	36833635	748
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000222080	retained_intron		12	1	111574536	4015
ENSMUSG00000087295	antisense	Gm3948	ENSMUST00000147795	antisense		11	-1	78293956	421
ENSMUSG00000085180	lincRNA	AI838599	ENSMUST00000145581	lincRNA		4	1	3247356	543
ENSMUSG00000036295	protein_coding	Lrrn3	ENSMUST00000043884	protein_coding	principal1	12	-1	41486431	3865
ENSMUSG00000021243	protein_coding	Fcf1	ENSMUST00000172241	retained_intron		12	1	84980210	617
ENSMUSG00000030727	protein_coding	Rabep2	ENSMUST00000150933	nonsense_mediated_decay		7	1	126429428	623
ENSMUSG00000044442	protein_coding	N6amt1	ENSMUST00000120284	protein_coding		16	1	87354243	3473
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000138241	processed_transcript		2	-1	17361086	335
ENSMUSG00000087531	sense_intronic	Gm15606	ENSMUST00000134006	sense_intronic		9	1	28197887	390
ENSMUSG00000030727	protein_coding	Rabep2	ENSMUST00000106405	protein_coding	alternative2	7	1	126429440	2279
ENSMUSG00000042514	protein_coding	Klhl14	ENSMUST00000049105	protein_coding	principal1	18	-1	21652368	4018
ENSMUSG00000085180	lincRNA	AI838599	ENSMUST00000144933	lincRNA		4	1	3247518	557
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000124611	protein_coding		2	-1	17529980	393
ENSMUSG00000006464	protein_coding	Bbs1	ENSMUST00000053506	protein_coding	principal1	19	-1	4906628	5602
ENSMUSG00000092006	antisense	Gm17139	ENSMUST00000163802	antisense		12	1	84918148	571
ENSMUSG00000113516	antisense	Gm47368	ENSMUST00000221226	antisense		12	-1	41412665	1037
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000221448	nonsense_mediated_decay		12	1	111575014	539
ENSMUSG00000087531	sense_intronic	Gm15606	ENSMUST00000139851	sense_intronic		9	1	28197940	711
ENSMUSG00000030727	protein_coding	Rabep2	ENSMUST00000127154	retained_intron		7	1	126438176	483
ENSMUSG00000044442	protein_coding	N6amt1	ENSMUST00000118115	protein_coding		16	1	87354245	1951
ENSMUSG00000113086	antisense	Gm47376	ENSMUST00000223331	antisense		12	-1	41348090	690
ENSMUSG00000032118	protein_coding	Fez1	ENSMUST00000160041	nonsense_mediated_decay		9	1	36843778	755
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000221753	protein_coding	alternative1	12	1	111575051	2394
ENSMUSG00000113370	lincRNA	Gm46348	ENSMUST00000222917	lincRNA		12	-1	42016756	2151
ENSMUSG00000006464	protein_coding	Bbs1	ENSMUST00000238170	protein_coding		19	-1	4906628	1841
ENSMUSG00000107215	TEC	Gm43197	ENSMUST00000201493	TEC		6	-1	3339354	2583
ENSMUSG00000113105	antisense	Gm47371	ENSMUST00000221020	antisense		12	-1	41828523	222
ENSMUSG00000113994	antisense	Gm47375	ENSMUST00000220956	antisense		12	-1	41044939	1298
ENSMUSG00000030727	protein_coding	Rabep2	ENSMUST00000148536	retained_intron		7	1	126440293	662
ENSMUSG00000032118	protein_coding	Fez1	ENSMUST00000162235	protein_coding		9	1	36868878	224
ENSMUSG00000006464	protein_coding	Bbs1	ENSMUST00000237085	protein_coding		19	-1	4906620	1549
ENSMUSG00000030793	protein_coding	Pycard	ENSMUST00000033056	protein_coding	principal1	7	-1	127993867	3800
ENSMUSG00000062257	protein_coding	Opcml	ENSMUST00000134002	processed_transcript		9	1	27790775	351
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000221459	protein_coding	alternative1	12	1	111575051	2807
ENSMUSG00000030727	protein_coding	Rabep2	ENSMUST00000133300	retained_intron		7	1	126444800	2338
ENSMUSG00000032118	protein_coding	Fez1	ENSMUST00000159137	retained_intron		9	1	36870103	755
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000221631	processed_transcript		12	1	111588150	5601
ENSMUSG00000027323	protein_coding	Rad51	ENSMUST00000140939	protein_coding		2	1	119112793	779
ENSMUSG00000106846	processed_pseudogene	Gm42786	ENSMUST00000202357	processed_pseudogene		3	-1	39820760	280
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000221390	retained_intron		12	1	111604511	309
ENSMUSG00000032118	protein_coding	Fez1	ENSMUST00000161978	protein_coding		9	1	36870503	1519
ENSMUSG00000030793	protein_coding	Pycard	ENSMUST00000205594	protein_coding		7	-1	127993527	493
ENSMUSG00000106948	processed_pseudogene	Gm42785	ENSMUST00000202316	processed_pseudogene		3	1	39823577	3835
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000222870	nonsense_mediated_decay		12	1	111604511	496
ENSMUSG00000106734	processed_transcript	Gm20559	ENSMUST00000201831	lincRNA		6	-1	3346071	2993
ENSMUSG00000099427	processed_pseudogene	Gm18700	ENSMUST00000185791	processed_pseudogene		1	1	100597075	553
ENSMUSG00000106734	processed_transcript	Gm20559	ENSMUST00000201976	processed_transcript		6	-1	3346050	670
ENSMUSG00000116797	sense_intronic	2600002D14Rik	ENSMUST00000231824	sense_intronic		16	1	36862450	292
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000221009	retained_intron		12	1	111623261	670
ENSMUSG00000106734	processed_transcript	Gm20559	ENSMUST00000202696	lincRNA		6	-1	3346058	358
ENSMUSG00000032118	protein_coding	Fez1	ENSMUST00000163816	protein_coding	principal1	9	1	36843659	1285
ENSMUSG00000099856	protein_coding	Gm20906	ENSMUST00000186493	protein_coding	principal1	Y	1	87550966	923
ENSMUSG00000099892	processed_pseudogene	Gm18185	ENSMUST00000186725	processed_pseudogene		1	1	100643582	667
ENSMUSG00000006464	protein_coding	Bbs1	ENSMUST00000237362	nonsense_mediated_decay		19	-1	4906620	1993
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000221923	retained_intron		12	1	111624509	895
ENSMUSG00000106734	processed_transcript	Gm20559	ENSMUST00000201032	lincRNA		6	-1	3346097	433
ENSMUSG00000007411	protein_coding	Mark3	ENSMUST00000221841	processed_transcript		12	1	111654659	514
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000150194	processed_transcript		2	-1	17390939	709
ENSMUSG00000112322	TEC	Gm48115	ENSMUST00000219103	TEC		10	1	120281240	960
ENSMUSG00000006464	protein_coding	Bbs1	ENSMUST00000236150	retained_intron		19	-1	4897717	667
ENSMUSG00000106734	processed_transcript	Gm20559	ENSMUST00000202544	retained_intron		6	-1	3346128	484
ENSMUSG00000002103	protein_coding	Acp2	ENSMUST00000150403	protein_coding		2	1	91202885	966
ENSMUSG00000106734	processed_transcript	Gm20559	ENSMUST00000202514	retained_intron		6	-1	3346098	1575
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000137253	processed_transcript		2	-1	17390982	436
ENSMUSG00000091873	protein_coding	Olfr732	ENSMUST00000213701	protein_coding	principal1	14	-1	50284206	3862
ENSMUSG00000107222	TEC	Gm43198	ENSMUST00000200927	TEC		6	1	3334633	326
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000127912	processed_transcript		2	-1	17390969	480
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000191896	protein_coding	principal1	1	-1	133661318	4396
ENSMUSG00000081165	processed_pseudogene	Gm11783	ENSMUST00000119549	processed_pseudogene		4	1	3258349	885
ENSMUSG00000091873	protein_coding	Olfr732	ENSMUST00000071208	protein_coding	principal1	14	-1	50282271	1044
ENSMUSG00000037593	protein_coding	Rskr	ENSMUST00000046361	protein_coding		11	1	78290841	959
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000131957	protein_coding		2	-1	17462787	1709
ENSMUSG00000037884	lincRNA	1700017G19Rik	ENSMUST00000035860	lincRNA		3	-1	40522912	2437
ENSMUSG00000037593	protein_coding	Rskr	ENSMUST00000238934	protein_coding	principal1	11	1	78290867	1485
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000191828	processed_transcript		1	-1	133627232	552
ENSMUSG00000086792	antisense	Gm12364	ENSMUST00000144419	antisense		4	1	34962220	547
ENSMUSG00000062257	protein_coding	Opcml	ENSMUST00000115243	protein_coding		9	1	27790947	6676
ENSMUSG00000101796	lincRNA	Gm29277	ENSMUST00000185226	lincRNA		Y	1	206151	602
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000095767	protein_coding	principal1	12	1	38780082	6576
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000195669	protein_coding		1	-1	133639170	581
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000132418	protein_coding		2	-1	17462789	1734
ENSMUSG00000062257	protein_coding	Opcml	ENSMUST00000214395	retained_intron		9	1	27791147	1771
ENSMUSG00000037884	lincRNA	1700017G19Rik	ENSMUST00000202778	lincRNA		3	-1	40509774	714
ENSMUSG00000113740	processed_pseudogene	Gm8598	ENSMUST00000221184	processed_pseudogene		13	1	3008720	836
ENSMUSG00000062257	protein_coding	Opcml	ENSMUST00000123779	processed_transcript		9	1	27791302	665
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000195424	protein_coding		1	-1	133661378	973
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000053950	protein_coding	principal1	7	-1	67645231	2923
ENSMUSG00000090874	protein_coding	Olfr733	ENSMUST00000216195	protein_coding	principal1	14	-1	50301522	3669
ENSMUSG00000062257	protein_coding	Opcml	ENSMUST00000133142	processed_transcript		9	1	28403149	2592
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000194668	protein_coding		1	-1	133661358	662
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000162563	protein_coding	principal1	12	1	38780284	1865
ENSMUSG00000042993	protein_coding	Ifnk	ENSMUST00000058595	protein_coding	principal1	4	1	35152056	805
ENSMUSG00000090874	protein_coding	Olfr733	ENSMUST00000214372	protein_coding	principal1	14	-1	50301522	3530
ENSMUSG00000101492	lincRNA	Gm29089	ENSMUST00000186209	lincRNA		Y	-1	323295	602
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000145492	protein_coding		2	-1	17460621	1426
ENSMUSG00000056966	protein_coding	Gjc3	ENSMUST00000077119	protein_coding	principal1	5	-1	137963098	4002
ENSMUSG00000090874	protein_coding	Olfr733	ENSMUST00000214756	protein_coding	principal1	14	-1	50301522	3640
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000161164	protein_coding		12	1	38780319	544
ENSMUSG00000083632	processed_pseudogene	Gm11786	ENSMUST00000120799	processed_pseudogene		4	1	3327175	155
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000192107	retained_intron		1	-1	133661360	902
ENSMUSG00000006464	protein_coding	Bbs1	ENSMUST00000235498	retained_intron		19	-1	4906618	1244
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000160996	protein_coding		12	1	38780349	850
ENSMUSG00000062257	protein_coding	Opcml	ENSMUST00000073822	protein_coding	principal1	9	1	28403797	2378
ENSMUSG00000056966	protein_coding	Gjc3	ENSMUST00000199083	retained_intron		5	-1	137963095	584
ENSMUSG00000006464	protein_coding	Bbs1	ENSMUST00000236538	processed_transcript		19	-1	4906369	643
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000193504	protein_coding		1	-1	133661282	479
ENSMUSG00000055053	protein_coding	Nfic	ENSMUST00000078185	protein_coding		10	-1	81427114	3163
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000160856	protein_coding		12	1	38780848	1474
ENSMUSG00000090874	protein_coding	Olfr733	ENSMUST00000163469	protein_coding	principal1	14	-1	50299330	994
ENSMUSG00000006464	protein_coding	Bbs1	ENSMUST00000237638	retained_intron		19	-1	4906627	2019
ENSMUSG00000100977	processed_pseudogene	Gm29334	ENSMUST00000190334	processed_pseudogene		1	1	100653800	357
ENSMUSG00000039531	protein_coding	Zup1	ENSMUST00000218055	protein_coding	principal1	10	-1	33951259	2180
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000145545	processed_transcript		2	-1	17528324	2917
ENSMUSG00000091834	transcribed_unprocessed_pseudogene	Gm17177	ENSMUST00000222007	processed_transcript		13	1	3082188	990
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000195067	protein_coding		1	-1	133661296	786
ENSMUSG00000091834	transcribed_unprocessed_pseudogene	Gm17177	ENSMUST00000169144	transcribed_unprocessed_pseudogene		13	1	3121132	483
ENSMUSG00000062257	protein_coding	Opcml	ENSMUST00000126673	retained_intron		9	1	28404083	2894
ENSMUSG00000112672	processed_pseudogene	Gm48118	ENSMUST00000219089	processed_pseudogene		10	-1	120287272	195
ENSMUSG00000039354	protein_coding	Smarcal1	ENSMUST00000047615	protein_coding	principal1	1	1	72583251	3059
ENSMUSG00000113763	transcribed_unprocessed_pseudogene	Gm49287	ENSMUST00000223224	transcribed_unprocessed_pseudogene		13	1	3082155	121
ENSMUSG00000101684	unprocessed_pseudogene	Gm28946	ENSMUST00000191176	unprocessed_pseudogene		Y	-1	51747723	696
ENSMUSG00000113784	lincRNA	Gm46400	ENSMUST00000223003	lincRNA		13	-1	3119562	867
ENSMUSG00000113784	lincRNA	Gm46400	ENSMUST00000222294	lincRNA		13	-1	3119562	724
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000191705	retained_intron		1	-1	133661281	418
ENSMUSG00000062257	protein_coding	Opcml	ENSMUST00000150098	processed_transcript		9	1	28404169	632
ENSMUSG00000039354	protein_coding	Smarcal1	ENSMUST00000152225	protein_coding	principal1	1	1	72583615	2994
ENSMUSG00000100820	lincRNA	Gm28945	ENSMUST00000187780	lincRNA		Y	-1	51756918	2165
ENSMUSG00000062257	protein_coding	Opcml	ENSMUST00000126845	processed_transcript		9	1	28661629	730
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000192148	processed_transcript		1	-1	133661368	300
ENSMUSG00000055053	protein_coding	Nfic	ENSMUST00000020461	protein_coding	principal3	10	-1	81427173	3348
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000130725	processed_transcript		2	-1	17731464	2750
ENSMUSG00000118617	unprocessed_pseudogene	AC152418.1	ENSMUST00000239225	unprocessed_pseudogene		7	1	7015914	84
ENSMUSG00000039354	protein_coding	Smarcal1	ENSMUST00000150725	retained_intron		1	1	72585638	4003
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000191932	processed_transcript		1	-1	133661359	323
ENSMUSG00000110741	antisense	Gm48091	ENSMUST00000215483	antisense		9	-1	28954347	1105
ENSMUSG00000053702	protein_coding	Nebl	ENSMUST00000177966	protein_coding		2	-1	17391008	1690
ENSMUSG00000102976	protein_coding	Zc3h11a	ENSMUST00000192775	processed_transcript		1	-1	133661380	879
ENSMUSG00000039354	protein_coding	Smarcal1	ENSMUST00000126832	retained_intron		1	1	72616522	542
ENSMUSG00000055053	protein_coding	Nfic	ENSMUST00000152670	processed_transcript		10	-1	81400554	476
ENSMUSG00000101071	unprocessed_pseudogene	Gm29577	ENSMUST00000186427	unprocessed_pseudogene		Y	-1	76128186	693
ENSMUSG00000039531	protein_coding	Zup1	ENSMUST00000218275	nonsense_mediated_decay		10	-1	33949860	1872
ENSMUSG00000055053	protein_coding	Nfic	ENSMUST00000140916	protein_coding		10	-1	81407641	575
ENSMUSG00000099425	unprocessed_pseudogene	Gm29573	ENSMUST00000190291	unprocessed_pseudogene		Y	1	76232645	919
ENSMUSG00000100232	lincRNA	Gm28947	ENSMUST00000188701	lincRNA		Y	1	51790006	1499
ENSMUSG00000039531	protein_coding	Zup1	ENSMUST00000218880	protein_coding		10	-1	33951195	2005
ENSMUSG00000092482	antisense	Gm20531	ENSMUST00000174861	antisense		6	1	124732168	1373
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000188576	retained_intron		1	1	91250304	639
ENSMUSG00000039531	protein_coding	Zup1	ENSMUST00000219457	nonsense_mediated_decay		10	-1	33951212	5512
ENSMUSG00000100232	lincRNA	Gm28947	ENSMUST00000188627	lincRNA		Y	1	51790459	622
ENSMUSG00000039531	protein_coding	Zup1	ENSMUST00000219878	nonsense_mediated_decay		10	-1	33951269	4528
ENSMUSG00000110387	processed_pseudogene	Gm45478	ENSMUST00000209472	processed_pseudogene		7	-1	45512567	211
ENSMUSG00000100232	lincRNA	Gm28947	ENSMUST00000188506	lincRNA		Y	1	51790459	438
ENSMUSG00000073910	protein_coding	Mob3b	ENSMUST00000102975	protein_coding	principal1	4	-1	35157484	6030
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000162730	retained_intron		12	1	38781113	3605
ENSMUSG00000056899	protein_coding	Immp2l	ENSMUST00000132121	protein_coding	principal1	12	1	41024090	1147
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000113567	protein_coding	principal1	1	-1	75506361	5679
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000161513	protein_coding		12	1	38781129	828
ENSMUSG00000073910	protein_coding	Mob3b	ENSMUST00000155725	processed_transcript		4	-1	35157484	1023
ENSMUSG00000109177	unprocessed_pseudogene	Pafah1b1-ps2	ENSMUST00000207209	unprocessed_pseudogene		7	-1	7063452	1223
ENSMUSG00000037593	protein_coding	Rskr	ENSMUST00000147549	retained_intron		11	1	78290892	2088
ENSMUSG00000056899	protein_coding	Immp2l	ENSMUST00000134965	protein_coding	principal1	12	1	41024329	977
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000161980	protein_coding		12	1	38783470	1939
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000154636	retained_intron		1	-1	75487802	651
ENSMUSG00000109488	processed_pseudogene	Gm6828	ENSMUST00000207902	processed_pseudogene		7	-1	7098028	1186
ENSMUSG00000084102	unprocessed_pseudogene	Sult2a-ps3	ENSMUST00000117899	unprocessed_pseudogene		7	-1	14141004	428
ENSMUSG00000108938	processed_pseudogene	Gm44583	ENSMUST00000207478	processed_pseudogene		7	1	7106975	281
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000160701	protein_coding		12	1	38783481	1578
ENSMUSG00000037593	protein_coding	Rskr	ENSMUST00000122937	retained_intron		11	1	78290894	1640
ENSMUSG00000055053	protein_coding	Nfic	ENSMUST00000117966	protein_coding		10	-1	81431005	1655
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000156705	retained_intron		1	-1	75488078	440
ENSMUSG00000056899	protein_coding	Immp2l	ENSMUST00000140790	retained_intron		12	1	41024127	347
ENSMUSG00000037593	protein_coding	Rskr	ENSMUST00000124730	retained_intron		11	1	78290929	1348
ENSMUSG00000055053	protein_coding	Nfic	ENSMUST00000221817	protein_coding		10	-1	81455635	1531
ENSMUSG00000053909	protein_coding	Rhox10	ENSMUST00000115150	protein_coding	principal1	X	1	38066475	763
ENSMUSG00000039531	protein_coding	Zup1	ENSMUST00000048222	protein_coding		10	-1	33951222	2991
ENSMUSG00000101241	unprocessed_pseudogene	Gm29111	ENSMUST00000188823	unprocessed_pseudogene		Y	-1	87636701	696
ENSMUSG00000056899	protein_coding	Immp2l	ENSMUST00000153184	retained_intron		12	1	41024126	669
ENSMUSG00000056899	protein_coding	Immp2l	ENSMUST00000080160	protein_coding		12	1	41068312	239
ENSMUSG00000037593	protein_coding	Rskr	ENSMUST00000130947	retained_intron		11	1	78291556	400
ENSMUSG00000002103	protein_coding	Acp2	ENSMUST00000002172	protein_coding	principal1	2	1	91202909	4656
ENSMUSG00000113766	TEC	Gm47374	ENSMUST00000222596	TEC		12	1	41545391	2494
ENSMUSG00000080705	unprocessed_pseudogene	Sult2a-ps4	ENSMUST00000121421	unprocessed_pseudogene		7	-1	14193524	386
ENSMUSG00000039531	protein_coding	Zup1	ENSMUST00000219935	retained_intron		10	-1	33933340	3207
ENSMUSG00000037593	protein_coding	Rskr	ENSMUST00000136011	retained_intron		11	1	78293807	2482
ENSMUSG00000039531	protein_coding	Zup1	ENSMUST00000218222	protein_coding		10	-1	33951225	562
ENSMUSG00000002103	protein_coding	Acp2	ENSMUST00000238832	protein_coding		2	1	91202909	4656
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000159334	protein_coding		12	1	38783509	3981
ENSMUSG00000100378	processed_pseudogene	Rpap3-ps1	ENSMUST00000190928	processed_pseudogene		7	-1	14187081	454
ENSMUSG00000025314	protein_coding	Ptprj	ENSMUST00000111495	protein_coding	alternative2	2	-1	90479170	4197
ENSMUSG00000045306	protein_coding	Olfr734	ENSMUST00000216732	processed_transcript		14	-1	50326761	2299
ENSMUSG00000042828	protein_coding	Trim72	ENSMUST00000106248	protein_coding	principal1	7	1	128003949	2134
ENSMUSG00000045306	protein_coding	Olfr734	ENSMUST00000217152	protein_coding	principal1	14	-1	50326761	4416
ENSMUSG00000057503	protein_coding	Olfr1459	ENSMUST00000213493	protein_coding	principal1	19	-1	13149532	8854
ENSMUSG00000100695	processed_pseudogene	Gm28110	ENSMUST00000185782	processed_pseudogene		Y	-1	87673252	315
ENSMUSG00000002103	protein_coding	Acp2	ENSMUST00000155418	protein_coding		2	1	91202924	510
ENSMUSG00000039531	protein_coding	Zup1	ENSMUST00000218892	protein_coding		10	-1	33951235	655
ENSMUSG00000029769	protein_coding	Ccdc136	ENSMUST00000132232	processed_transcript		6	1	29396309	384
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000220492	processed_transcript		12	1	38819543	5482
ENSMUSG00000089830	lincRNA	Gm15749	ENSMUST00000161848	lincRNA		5	1	120648040	612
ENSMUSG00000057503	protein_coding	Olfr1459	ENSMUST00000215405	processed_transcript		19	-1	13149549	7114
ENSMUSG00000045306	protein_coding	Olfr734	ENSMUST00000050928	protein_coding	principal1	14	-1	50320868	1033
ENSMUSG00000101866	lincRNA	Gm28109	ENSMUST00000189979	lincRNA		Y	-1	87678004	2167
ENSMUSG00000004151	protein_coding	Etv1	ENSMUST00000161591	processed_transcript		12	1	38837398	670
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000155084	protein_coding		1	-1	75505641	4131
ENSMUSG00000025314	protein_coding	Ptprj	ENSMUST00000111493	protein_coding	alternative2	2	-1	90471336	7124
ENSMUSG00000057503	protein_coding	Olfr1459	ENSMUST00000078299	protein_coding	principal1	19	-1	13146743	1102
ENSMUSG00000042828	protein_coding	Trim72	ENSMUST00000081042	protein_coding	principal1	7	1	128004378	1755
ENSMUSG00000027323	protein_coding	Rad51	ENSMUST00000028795	protein_coding	principal1	2	1	119112807	3368
ENSMUSG00000050158	protein_coding	Olfr165	ENSMUST00000206110	protein_coding	alternative1	16	-1	19423134	1862
ENSMUSG00000011382	protein_coding	Dhdh	ENSMUST00000011526	protein_coding	principal1	7	-1	45488805	5323
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000132252	protein_coding		1	-1	75493067	1252
ENSMUSG00000095236	protein_coding	Olfr38	ENSMUST00000215796	protein_coding	principal1	6	1	42756404	2782
ENSMUSG00000025314	protein_coding	Ptprj	ENSMUST00000168621	protein_coding	principal4	2	-1	90580647	7634
ENSMUSG00000087530	antisense	Gm15533	ENSMUST00000206216	antisense		7	-1	128005160	3262
ENSMUSG00000050158	protein_coding	Olfr165	ENSMUST00000052516	protein_coding	alternative1	16	-1	19408078	1040
ENSMUSG00000050158	protein_coding	Olfr165	ENSMUST00000206410	protein_coding	principal2	16	-1	19408078	1040
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000145382	retained_intron		1	-1	75491811	724
ENSMUSG00000098707	processed_pseudogene	Gm27236	ENSMUST00000184147	processed_pseudogene		12	1	120000527	442
ENSMUSG00000022838	protein_coding	Eaf2	ENSMUST00000075946	protein_coding		16	-1	36874826	1878
ENSMUSG00000087530	antisense	Gm15533	ENSMUST00000126205	antisense		7	-1	128005190	465
ENSMUSG00000027323	protein_coding	Rad51	ENSMUST00000110828	retained_intron		2	1	119112814	2849
ENSMUSG00000011382	protein_coding	Dhdh	ENSMUST00000209450	processed_transcript		7	-1	45479931	572
ENSMUSG00000002103	protein_coding	Acp2	ENSMUST00000124131	retained_intron		2	1	91202924	3124
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000187953	nonsense_mediated_decay		7	-1	67645207	2761
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000150293	processed_transcript		1	-1	75492631	341
ENSMUSG00000095236	protein_coding	Olfr38	ENSMUST00000074499	protein_coding	principal1	6	1	42762054	954
ENSMUSG00000051362	protein_coding	Olfr589	ENSMUST00000218483	protein_coding	principal1	7	-1	103156356	966
ENSMUSG00000011382	protein_coding	Dhdh	ENSMUST00000210440	retained_intron		7	-1	45487402	1925
ENSMUSG00000048004	protein_coding	Tmem196	ENSMUST00000223374	retained_intron		12	1	119945822	1607
ENSMUSG00000110582	lincRNA	Gm30052	ENSMUST00000211951	lincRNA		8	-1	113676458	913
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000138352	retained_intron		1	-1	75493041	571
ENSMUSG00000022149	protein_coding	C9	ENSMUST00000022749	protein_coding	alternative2	15	1	6445327	2048
ENSMUSG00000027323	protein_coding	Rad51	ENSMUST00000152327	nonsense_mediated_decay		2	1	119112817	2975
ENSMUSG00000002103	protein_coding	Acp2	ENSMUST00000127643	processed_transcript		2	1	91202928	233
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000190115	processed_transcript		7	-1	67579750	1480
ENSMUSG00000051362	protein_coding	Olfr589	ENSMUST00000061055	protein_coding	principal1	7	-1	103155745	954
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000201917	protein_coding		5	1	30888935	3579
ENSMUSG00000027323	protein_coding	Rad51	ENSMUST00000141389	retained_intron		2	1	119118696	887
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000113565	protein_coding		1	-1	75506361	3379
ENSMUSG00000002103	protein_coding	Acp2	ENSMUST00000239169	protein_coding	principal1	2	1	91202912	4652
ENSMUSG00000022149	protein_coding	C9	ENSMUST00000128097	nonsense_mediated_decay		15	1	6445372	736
ENSMUSG00000051038	protein_coding	Rhox11	ENSMUST00000054147	protein_coding	principal1	X	-1	38085141	811
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000200990	retained_intron		5	1	30888941	3267
ENSMUSG00000027323	protein_coding	Rad51	ENSMUST00000151406	protein_coding		2	1	119123803	738
ENSMUSG00000097798	unprocessed_pseudogene	Gm26898	ENSMUST00000181678	unprocessed_pseudogene		14	1	4593905	384
ENSMUSG00000056822	protein_coding	Olfr166	ENSMUST00000216465	protein_coding	principal1	16	1	19483694	4371
ENSMUSG00000084356	unprocessed_pseudogene	Olfr590-ps1	ENSMUST00000118801	unprocessed_pseudogene		7	1	103165853	898
ENSMUSG00000022149	protein_coding	C9	ENSMUST00000127196	retained_intron		15	1	6489480	551
ENSMUSG00000056822	protein_coding	Olfr166	ENSMUST00000213531	protein_coding	principal1	16	1	19483694	4205
ENSMUSG00000022149	protein_coding	C9	ENSMUST00000147905	protein_coding		15	1	6489918	543
ENSMUSG00000038368	protein_coding	Focad	ENSMUST00000159342	protein_coding	alternative2	4	1	88121299	5456
ENSMUSG00000085784	antisense	Gm12158	ENSMUST00000130493	antisense		11	-1	44662676	631
ENSMUSG00000027323	protein_coding	Rad51	ENSMUST00000154683	retained_intron		2	1	119131518	482
ENSMUSG00000089963	unprocessed_pseudogene	Rhox11-ps3	ENSMUST00000121166	unprocessed_pseudogene		X	1	38089842	233
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000127507	retained_intron		1	-1	75503680	2404
ENSMUSG00000027323	protein_coding	Rad51	ENSMUST00000143934	retained_intron		2	1	119134162	557
ENSMUSG00000022149	protein_coding	C9	ENSMUST00000239466	protein_coding	principal2	15	1	6445333	1757
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000191035	nonsense_mediated_decay		7	-1	67645207	4872
ENSMUSG00000056822	protein_coding	Olfr166	ENSMUST00000074739	protein_coding	principal1	16	1	19486793	1040
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000185818	processed_transcript		7	-1	67535397	356
ENSMUSG00000046210	protein_coding	Olfr735	ENSMUST00000216634	protein_coding	alternative2	14	-1	50348872	3860
ENSMUSG00000038368	protein_coding	Focad	ENSMUST00000162039	processed_transcript		4	1	88400350	599
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000190770	processed_transcript		7	-1	67620027	388
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000129403	retained_intron		1	-1	75506361	2709
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000202757	retained_intron		5	1	30888956	3466
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000191062	processed_transcript		7	-1	67607262	456
ENSMUSG00000046210	protein_coding	Olfr735	ENSMUST00000049729	protein_coding	principal2	14	-1	50346440	1065
ENSMUSG00000026211	protein_coding	Obsl1	ENSMUST00000145306	retained_intron		1	-1	75506452	2649
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000188971	processed_transcript		7	-1	67619976	486
ENSMUSG00000002109	protein_coding	Ddb2	ENSMUST00000152277	processed_transcript		2	-1	91235331	2297
ENSMUSG00000075187	protein_coding	Olfr1057	ENSMUST00000217435	protein_coding	principal1	2	-1	86378393	3249
ENSMUSG00000094258	protein_coding	Gm8159	ENSMUST00000163738	protein_coding	alternative2	14	1	4632352	997
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000190276	protein_coding		7	-1	67645204	574
ENSMUSG00000045341	protein_coding	Olfr167	ENSMUST00000217566	processed_transcript		16	-1	19522169	6136
ENSMUSG00000002109	protein_coding	Ddb2	ENSMUST00000150427	processed_transcript		2	-1	91236907	1698
ENSMUSG00000075187	protein_coding	Olfr1057	ENSMUST00000099892	protein_coding	principal1	2	-1	86375410	948
ENSMUSG00000094258	protein_coding	Gm8159	ENSMUST00000170546	protein_coding	principal5	14	1	4632410	1759
ENSMUSG00000045341	protein_coding	Olfr167	ENSMUST00000214315	protein_coding	principal1	16	-1	19522266	7435
ENSMUSG00000094258	protein_coding	Gm8159	ENSMUST00000179231	protein_coding	alternative2	14	1	4632415	618
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000201918	retained_intron		5	1	30888969	2352
ENSMUSG00000105130	antisense	Gm43825	ENSMUST00000199650	antisense		5	-1	3625363	734
ENSMUSG00000022575	protein_coding	Gsdmd	ENSMUST00000023238	protein_coding	principal1	15	1	75862327	1792
ENSMUSG00000045341	protein_coding	Olfr167	ENSMUST00000054606	protein_coding	principal1	16	-1	19515634	939
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000032775	protein_coding		7	-1	67645207	1817
ENSMUSG00000038368	protein_coding	Focad	ENSMUST00000097992	protein_coding	principal2	4	1	88094630	5791
ENSMUSG00000075186	protein_coding	Olfr1058	ENSMUST00000213998	protein_coding	principal1	2	-1	86388561	1710
ENSMUSG00000057461	protein_coding	Olfr591	ENSMUST00000218115	processed_transcript		7	-1	103178340	945
ENSMUSG00000057461	protein_coding	Olfr591	ENSMUST00000216581	protein_coding	principal1	7	-1	103178340	4802
ENSMUSG00000022575	protein_coding	Gsdmd	ENSMUST00000230514	protein_coding		15	1	75862339	415
ENSMUSG00000048004	protein_coding	Tmem196	ENSMUST00000058644	protein_coding	principal3	12	1	119945957	1678
ENSMUSG00000075186	protein_coding	Olfr1058	ENSMUST00000102631	protein_coding	principal1	2	-1	86386416	951
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000191386	processed_transcript		7	-1	67619998	554
ENSMUSG00000022575	protein_coding	Gsdmd	ENSMUST00000230881	retained_intron		15	1	75862364	406
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000201168	protein_coding	alternative1	5	1	30888969	3199
ENSMUSG00000057461	protein_coding	Olfr591	ENSMUST00000074272	protein_coding	principal1	7	-1	103173635	945
ENSMUSG00000038368	protein_coding	Focad	ENSMUST00000129967	retained_intron		4	1	88094629	590
ENSMUSG00000071766	protein_coding	Rhox12	ENSMUST00000096453	protein_coding	principal1	X	-1	38110907	920
ENSMUSG00000022575	protein_coding	Gsdmd	ENSMUST00000229331	protein_coding		15	1	75862379	898
ENSMUSG00000030556	protein_coding	Lrrc28	ENSMUST00000189836	protein_coding		7	-1	67645268	503
ENSMUSG00000048004	protein_coding	Tmem196	ENSMUST00000183694	protein_coding	alternative1	12	1	119946410	845
ENSMUSG00000097523	antisense	1700022N22Rik	ENSMUST00000180932	antisense		17	1	25985808	821
ENSMUSG00000071766	protein_coding	Rhox12	ENSMUST00000183737	protein_coding		X	-1	38110787	761
ENSMUSG00000071766	protein_coding	Rhox12	ENSMUST00000115146	protein_coding	principal1	X	-1	38108143	561
ENSMUSG00000051067	protein_coding	Lingo3	ENSMUST00000053986	protein_coding	principal1	10	-1	80844039	3439
ENSMUSG00000097523	antisense	1700022N22Rik	ENSMUST00000235322	antisense		17	1	25985882	760
ENSMUSG00000048004	protein_coding	Tmem196	ENSMUST00000184209	nonsense_mediated_decay		12	1	119946424	486
ENSMUSG00000022575	protein_coding	Gsdmd	ENSMUST00000230571	retained_intron		15	1	75864694	915
ENSMUSG00000022575	protein_coding	Gsdmd	ENSMUST00000231170	retained_intron		15	1	75866590	677
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000202060	protein_coding		5	1	30888974	3121
ENSMUSG00000097523	antisense	1700022N22Rik	ENSMUST00000235528	antisense		17	1	25986066	628
ENSMUSG00000073956	protein_coding	Olfr592	ENSMUST00000106893	protein_coding	principal1	7	1	103184803	6566
ENSMUSG00000051067	protein_coding	Lingo3	ENSMUST00000219924	protein_coding		10	-1	80843798	271
ENSMUSG00000038368	protein_coding	Focad	ENSMUST00000107148	retained_intron		4	1	88345367	5988
ENSMUSG00000048004	protein_coding	Tmem196	ENSMUST00000184820	protein_coding		12	1	119946558	646
ENSMUSG00000073956	protein_coding	Olfr592	ENSMUST00000218618	protein_coding		7	1	103185789	5978
ENSMUSG00000038368	protein_coding	Focad	ENSMUST00000107147	protein_coding		4	1	88400565	1177
ENSMUSG00000046057	processed_pseudogene	Gm15428	ENSMUST00000121352	processed_pseudogene		1	1	156793512	333
ENSMUSG00000073956	protein_coding	Olfr592	ENSMUST00000098207	protein_coding	principal1	7	1	103186603	939
ENSMUSG00000038368	protein_coding	Focad	ENSMUST00000147527	retained_intron		4	1	88124436	466
ENSMUSG00000048004	protein_coding	Tmem196	ENSMUST00000184069	protein_coding		12	1	119946570	3192
ENSMUSG00000038368	protein_coding	Focad	ENSMUST00000144388	processed_transcript		4	1	88287635	558
ENSMUSG00000051969	protein_coding	Tlr11	ENSMUST00000185091	protein_coding	principal2	14	1	50357914	3207
ENSMUSG00000032997	protein_coding	Chpf	ENSMUST00000079205	protein_coding	principal1	1	-1	75479271	2892
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000201817	nonsense_mediated_decay		5	1	30889001	3305
ENSMUSG00000022838	protein_coding	Eaf2	ENSMUST00000114829	protein_coding	principal2	16	-1	36828261	1030
ENSMUSG00000038368	protein_coding	Focad	ENSMUST00000130603	retained_intron		4	1	88303137	709
ENSMUSG00000051969	protein_coding	Tlr11	ENSMUST00000063570	protein_coding	alternative2	14	1	50360502	2993
ENSMUSG00000082597	processed_pseudogene	Gm12645	ENSMUST00000117297	processed_pseudogene		4	1	88151696	275
ENSMUSG00000109612	lincRNA	Gm45253	ENSMUST00000210694	lincRNA		8	-1	46385888	2076
ENSMUSG00000051723	processed_pseudogene	Rpl31-ps13	ENSMUST00000060994	processed_pseudogene		13	1	100415565	378
ENSMUSG00000109912	processed_pseudogene	Gm45245	ENSMUST00000210082	processed_pseudogene		8	-1	46452304	376
ENSMUSG00000087651	protein_coding	1500009L16Rik	ENSMUST00000150459	protein_coding	principal1	10	1	83722865	1194
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000201225	protein_coding		5	1	30889006	2646
ENSMUSG00000090872	protein_coding	Gm3239	ENSMUST00000163525	protein_coding	principal5	14	1	4664192	1751
ENSMUSG00000087651	protein_coding	1500009L16Rik	ENSMUST00000218196	retained_intron		10	1	83722926	2405
ENSMUSG00000090872	protein_coding	Gm3239	ENSMUST00000169675	protein_coding	alternative2	14	1	4665094	519
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000114700	protein_coding		5	1	30889006	3296
ENSMUSG00000014529	protein_coding	Tmbim7	ENSMUST00000199959	protein_coding		5	1	3651181	758
ENSMUSG00000050197	protein_coding	Rhox13	ENSMUST00000152730	protein_coding	principal1	X	1	38121219	876
ENSMUSG00000032997	protein_coding	Chpf	ENSMUST00000094818	protein_coding		1	-1	75479307	3065
ENSMUSG00000087651	protein_coding	1500009L16Rik	ENSMUST00000218623	protein_coding		10	1	83737909	420
ENSMUSG00000024563	protein_coding	Smad2	ENSMUST00000168423	protein_coding	principal3	18	1	76241580	8089
ENSMUSG00000022838	protein_coding	Eaf2	ENSMUST00000157072	processed_transcript		16	-1	36875003	1106
ENSMUSG00000111384	unprocessed_pseudogene	Olfr1059-ps1	ENSMUST00000215214	unprocessed_pseudogene		2	-1	86389617	586
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000200850	protein_coding		5	1	30889326	940
ENSMUSG00000022838	protein_coding	Eaf2	ENSMUST00000138660	processed_transcript		16	-1	36875003	963
ENSMUSG00000028393	protein_coding	Alad	ENSMUST00000107444	protein_coding	principal1	4	-1	62519894	1247
ENSMUSG00000073955	protein_coding	Olfr593	ENSMUST00000210686	protein_coding	alternative2	7	1	103211895	951
ENSMUSG00000080942	processed_pseudogene	Zfp36l1-ps	ENSMUST00000118349	processed_pseudogene		X	1	38180728	899
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000201523	processed_transcript		5	1	30890282	577
ENSMUSG00000111010	unprocessed_pseudogene	Gm20734	ENSMUST00000216939	unprocessed_pseudogene		2	-1	86393952	193
ENSMUSG00000073955	protein_coding	Olfr593	ENSMUST00000098206	protein_coding	principal2	7	1	103211862	984
ENSMUSG00000024563	protein_coding	Smad2	ENSMUST00000091831	protein_coding	alternative1	18	1	76241701	1645
ENSMUSG00000058093	protein_coding	Zfp729b	ENSMUST00000012873	protein_coding	principal1	13	-1	67609707	4835
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000202565	retained_intron		5	1	30894204	839
ENSMUSG00000112077	processed_pseudogene	Gm47245	ENSMUST00000218819	processed_pseudogene		10	-1	83811565	1071
ENSMUSG00000022838	protein_coding	Eaf2	ENSMUST00000231782	processed_transcript		16	-1	36808705	668
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000202109	protein_coding		5	1	30894997	768
ENSMUSG00000032997	protein_coding	Chpf	ENSMUST00000143496	retained_intron		1	-1	75478746	3333
ENSMUSG00000090328	processed_pseudogene	Gm17073	ENSMUST00000168069	processed_pseudogene		14	-1	4679577	556
ENSMUSG00000022838	protein_coding	Eaf2	ENSMUST00000023537	protein_coding	alternative2	16	-1	36828227	849
ENSMUSG00000028393	protein_coding	Alad	ENSMUST00000030090	protein_coding	principal1	4	-1	62519918	1206
ENSMUSG00000032997	protein_coding	Chpf	ENSMUST00000138683	nonsense_mediated_decay		1	-1	75479119	2455
ENSMUSG00000024563	protein_coding	Smad2	ENSMUST00000171256	protein_coding		18	1	76242046	972
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000201901	retained_intron		5	1	30895139	408
ENSMUSG00000022838	protein_coding	Eaf2	ENSMUST00000147053	processed_transcript		16	-1	36828211	667
ENSMUSG00000058093	protein_coding	Zfp729b	ENSMUST00000223599	processed_transcript		13	-1	67609645	3877
ENSMUSG00000100458	unprocessed_pseudogene	Olfr1060-ps1	ENSMUST00000118335	unprocessed_pseudogene		2	-1	86398018	943
ENSMUSG00000032997	protein_coding	Chpf	ENSMUST00000124042	nonsense_mediated_decay		1	-1	75479114	497
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000201014	protein_coding		5	1	30895933	644
ENSMUSG00000112133	processed_pseudogene	Gm47247	ENSMUST00000217741	processed_pseudogene		10	1	83901852	277
ENSMUSG00000073954	protein_coding	Olfr594	ENSMUST00000214051	protein_coding	principal1	7	1	103216996	2809
ENSMUSG00000002109	protein_coding	Ddb2	ENSMUST00000111352	protein_coding		2	-1	91236885	2228
ENSMUSG00000058093	protein_coding	Zfp729b	ENSMUST00000138725	protein_coding		13	-1	67609687	855
ENSMUSG00000113689	lincRNA	Gm29676	ENSMUST00000222396	lincRNA		13	-1	44252670	1689
ENSMUSG00000024563	protein_coding	Smad2	ENSMUST00000172198	protein_coding		18	1	76242174	628
ENSMUSG00000022838	protein_coding	Eaf2	ENSMUST00000134556	retained_intron		16	-1	36874814	2377
ENSMUSG00000111699	lincRNA	C230099D08Rik	ENSMUST00000215772	lincRNA		10	-1	84004860	2727
ENSMUSG00000022838	protein_coding	Eaf2	ENSMUST00000114825	protein_coding		16	-1	36808705	1530
ENSMUSG00000097244	processed_pseudogene	Gm7928	ENSMUST00000181249	processed_pseudogene		13	1	67460000	701
ENSMUSG00000073954	protein_coding	Olfr594	ENSMUST00000098205	protein_coding	principal1	7	1	103219643	1087
ENSMUSG00000002109	protein_coding	Ddb2	ENSMUST00000135927	processed_transcript		2	-1	91236960	1592
ENSMUSG00000113689	lincRNA	Gm29676	ENSMUST00000222409	lincRNA		13	-1	44280449	364
ENSMUSG00000029165	protein_coding	Agbl5	ENSMUST00000069705	protein_coding	principal2	5	1	30888852	2922
ENSMUSG00000075185	protein_coding	Olfr1061	ENSMUST00000099889	protein_coding	principal1	2	-1	86414050	942
ENSMUSG00000024563	protein_coding	Smad2	ENSMUST00000025453	protein_coding	principal3	18	1	76261121	2410
ENSMUSG00000112936	lincRNA	Gm33958	ENSMUST00000222879	lincRNA		13	-1	44391117	450
ENSMUSG00000022837	protein_coding	Iqcb1	ENSMUST00000146272	processed_transcript		16	1	36828385	442
ENSMUSG00000107201	TEC	5930420M18Rik	ENSMUST00000202893	TEC		5	1	30897300	2281
ENSMUSG00000024563	protein_coding	Smad2	ENSMUST00000165084	protein_coding		18	1	76262492	614
ENSMUSG00000104317	TEC	Gm37908	ENSMUST00000195828	TEC		10	1	84061758	470
ENSMUSG00000024563	protein_coding	Smad2	ENSMUST00000113930	protein_coding		18	1	76262492	1305
ENSMUSG00000070730	protein_coding	Rmdn3	ENSMUST00000094695	protein_coding	principal1	2	-1	119157034	2249
ENSMUSG00000111524	lincRNA	Gm34113	ENSMUST00000213796	lincRNA		10	1	84092266	388
ENSMUSG00000111049	lincRNA	Gm34184	ENSMUST00000216477	lincRNA		10	-1	84100697	2713
ENSMUSG00000070730	protein_coding	Rmdn3	ENSMUST00000127965	retained_intron		2	-1	119140875	830
ENSMUSG00000034145	protein_coding	Tmem63c	ENSMUST00000146292	protein_coding	principal1	12	1	87026292	3455
ENSMUSG00000070730	protein_coding	Rmdn3	ENSMUST00000156332	retained_intron		2	-1	119147436	502
ENSMUSG00000004085	protein_coding	Map3k20	ENSMUST00000090824	protein_coding	principal3	2	1	72285637	3334
ENSMUSG00000070730	protein_coding	Rmdn3	ENSMUST00000130249	retained_intron		2	-1	119147445	423
ENSMUSG00000059291	protein_coding	Rpl11	ENSMUST00000153223	processed_transcript		4	-1	136028798	429
ENSMUSG00000090059	protein_coding	Olfr1062	ENSMUST00000216166	processed_transcript		2	-1	86426706	3575
ENSMUSG00000070730	protein_coding	Rmdn3	ENSMUST00000135419	protein_coding		2	-1	119156824	395
ENSMUSG00000090059	protein_coding	Olfr1062	ENSMUST00000217481	protein_coding	principal1	2	-1	86426749	3726
ENSMUSG00000087206	antisense	Gm16175	ENSMUST00000128181	antisense		7	1	19809609	248
ENSMUSG00000070730	protein_coding	Rmdn3	ENSMUST00000129351	protein_coding		2	-1	119156948	348
ENSMUSG00000034145	protein_coding	Tmem63c	ENSMUST00000131878	protein_coding	principal1	12	1	87038439	3311
ENSMUSG00000090059	protein_coding	Olfr1062	ENSMUST00000105213	protein_coding	principal1	2	-1	86423674	956
ENSMUSG00000042350	protein_coding	Arel1	ENSMUST00000163231	nonsense_mediated_decay		12	-1	84970824	5262
ENSMUSG00000070730	protein_coding	Rmdn3	ENSMUST00000139519	protein_coding		2	-1	119156964	626
ENSMUSG00000057842	protein_coding	Zfp595	ENSMUST00000109735	protein_coding	principal2	13	-1	67332547	3896
ENSMUSG00000087593	antisense	Gm16174	ENSMUST00000137373	antisense		7	1	19816553	402
ENSMUSG00000002109	protein_coding	Ddb2	ENSMUST00000028696	protein_coding	principal1	2	-1	91236982	1557
ENSMUSG00000059291	protein_coding	Rpl11	ENSMUST00000137580	processed_transcript		4	-1	136052685	604
ENSMUSG00000051703	protein_coding	Tmem198	ENSMUST00000113575	protein_coding	principal1	1	1	75479532	2185
ENSMUSG00000057842	protein_coding	Zfp595	ENSMUST00000133177	processed_transcript		13	-1	67317103	985
ENSMUSG00000057842	protein_coding	Zfp595	ENSMUST00000169142	nonsense_mediated_decay		13	-1	67332560	2440
ENSMUSG00000003873	protein_coding	Bax	ENSMUST00000211365	protein_coding		7	-1	45466836	801
ENSMUSG00000014529	protein_coding	Tmbim7	ENSMUST00000014673	protein_coding	principal3	5	1	3657004	1552
ENSMUSG00000109426	unprocessed_pseudogene	Olfr496-ps1	ENSMUST00000208862	unprocessed_pseudogene		7	1	108417104	915
ENSMUSG00000057842	protein_coding	Zfp595	ENSMUST00000168892	protein_coding	principal2	13	-1	67332570	4040
ENSMUSG00000116843	lincRNA	Gm49750	ENSMUST00000231454	lincRNA		16	1	21238495	598
ENSMUSG00000051703	protein_coding	Tmem198	ENSMUST00000148980	protein_coding		1	1	75479576	487
ENSMUSG00000085594	antisense	Gm11551	ENSMUST00000147438	antisense		11	1	101886237	410
ENSMUSG00000014529	protein_coding	Tmbim7	ENSMUST00000115515	retained_intron		5	1	3657179	1000
ENSMUSG00000034145	protein_coding	Tmem63c	ENSMUST00000154801	nonsense_mediated_decay		12	1	87021340	3583
ENSMUSG00000051703	protein_coding	Tmem198	ENSMUST00000050899	protein_coding	principal1	1	1	75479580	2456
ENSMUSG00000095239	protein_coding	Olfr497	ENSMUST00000213521	protein_coding	principal1	7	1	108420421	2396
ENSMUSG00000057842	protein_coding	Zfp595	ENSMUST00000171466	protein_coding	alternative2	13	-1	67332500	2240
ENSMUSG00000004085	protein_coding	Map3k20	ENSMUST00000135469	protein_coding	alternative2	2	1	72285728	6663
ENSMUSG00000114788	antisense	Gm48899	ENSMUST00000223925	antisense		13	1	67472478	737
ENSMUSG00000034145	protein_coding	Tmem63c	ENSMUST00000156162	protein_coding		12	1	87026616	448
ENSMUSG00000014529	protein_coding	Tmbim7	ENSMUST00000198739	protein_coding	alternative2	5	1	3657180	1270
ENSMUSG00000051703	protein_coding	Tmem198	ENSMUST00000187411	protein_coding		1	1	75479704	426
ENSMUSG00000095239	protein_coding	Olfr497	ENSMUST00000076406	protein_coding	principal1	7	1	108422573	945
ENSMUSG00000096918	lincRNA	Gm16863	ENSMUST00000181476	lincRNA		16	-1	21296872	2450
ENSMUSG00000014529	protein_coding	Tmbim7	ENSMUST00000156117	protein_coding		5	1	3661868	835
ENSMUSG00000003873	protein_coding	Bax	ENSMUST00000033093	protein_coding	principal1	7	-1	45466898	867
ENSMUSG00000109081	processed_pseudogene	Gm44611	ENSMUST00000207507	processed_pseudogene		7	-1	108459335	355
ENSMUSG00000053175	protein_coding	Bcl3	ENSMUST00000135609	protein_coding		7	-1	19809663	755
ENSMUSG00000034145	protein_coding	Tmem63c	ENSMUST00000110187	protein_coding	principal1	12	1	87026564	3327
ENSMUSG00000080868	processed_pseudogene	Gm15745	ENSMUST00000119807	processed_pseudogene		12	1	87067477	115
ENSMUSG00000096679	protein_coding	Olfr498	ENSMUST00000217616	protein_coding	principal1	7	1	108465326	2260
ENSMUSG00000112966	processed_pseudogene	Gm18499	ENSMUST00000220808	processed_pseudogene		12	-1	87081676	1021
ENSMUSG00000003873	protein_coding	Bax	ENSMUST00000210392	protein_coding		7	-1	45466831	1100
ENSMUSG00000001493	protein_coding	Meox1	ENSMUST00000057054	protein_coding	principal1	11	-1	101894374	2228
ENSMUSG00000003873	protein_coding	Bax	ENSMUST00000211615	retained_intron		7	-1	45466044	548
ENSMUSG00000059839	protein_coding	Zfp874b	ENSMUST00000019572	protein_coding	principal1	13	-1	67484225	3744
ENSMUSG00000003873	protein_coding	Bax	ENSMUST00000211195	protein_coding		7	-1	45466775	222
ENSMUSG00000057098	protein_coding	Ebf1	ENSMUST00000081265	protein_coding	principal3	11	1	44617317	5981
ENSMUSG00000020366	protein_coding	Mapk9	ENSMUST00000020634	protein_coding	principal4	11	1	49846753	4675
ENSMUSG00000003873	protein_coding	Bax	ENSMUST00000210019	protein_coding		7	-1	45466778	343
ENSMUSG00000057098	protein_coding	Ebf1	ENSMUST00000101326	protein_coding	alternative1	11	1	44617317	3422
ENSMUSG00000040435	protein_coding	Ppp1r15a	ENSMUST00000211212	protein_coding		7	-1	45523769	389
ENSMUSG00000032899	protein_coding	Styk1	ENSMUST00000049150	protein_coding	principal2	6	-1	131313827	3380
ENSMUSG00000074793	protein_coding	Hspa12b	ENSMUST00000099349	protein_coding	principal1	2	1	131127280	3413
ENSMUSG00000059839	protein_coding	Zfp874b	ENSMUST00000223711	processed_transcript		13	-1	67484258	1034
ENSMUSG00000057098	protein_coding	Ebf1	ENSMUST00000109268	protein_coding	alternative1	11	1	44617317	2864
ENSMUSG00000004085	protein_coding	Map3k20	ENSMUST00000112073	retained_intron		2	1	72285764	1925
ENSMUSG00000059839	protein_coding	Zfp874b	ENSMUST00000225027	processed_transcript		13	-1	67484212	454
ENSMUSG00000030008	protein_coding	Pradc1	ENSMUST00000032080	protein_coding	principal1	6	-1	85451283	1038
ENSMUSG00000074793	protein_coding	Hspa12b	ENSMUST00000100763	protein_coding		2	1	131127442	628
ENSMUSG00000035637	protein_coding	Grhpr	ENSMUST00000045078	protein_coding	principal1	4	1	44981395	1280
ENSMUSG00000020366	protein_coding	Mapk9	ENSMUST00000144857	processed_transcript		11	1	49846771	2192
ENSMUSG00000004085	protein_coding	Map3k20	ENSMUST00000150126	retained_intron		2	1	72285777	1227
ENSMUSG00000032899	protein_coding	Styk1	ENSMUST00000121078	protein_coding	alternative2	6	-1	131316398	1549
ENSMUSG00000059839	protein_coding	Zfp874b	ENSMUST00000224308	processed_transcript		13	-1	67484253	421
ENSMUSG00000074793	protein_coding	Hspa12b	ENSMUST00000127862	nonsense_mediated_decay		2	1	131127494	2007
ENSMUSG00000057098	protein_coding	Ebf1	ENSMUST00000140822	processed_transcript		11	1	44912138	320
ENSMUSG00000004085	protein_coding	Map3k20	ENSMUST00000135204	retained_intron		2	1	72285794	559
ENSMUSG00000059839	protein_coding	Zfp874b	ENSMUST00000223868	protein_coding		13	-1	67484214	596
ENSMUSG00000029402	protein_coding	Snrnp35	ENSMUST00000031349	protein_coding	principal1	5	1	124483134	1115
ENSMUSG00000114726	antisense	Gm48900	ENSMUST00000225810	antisense		13	1	67390475	622
ENSMUSG00000020366	protein_coding	Mapk9	ENSMUST00000148274	processed_transcript		11	1	49846893	1245
ENSMUSG00000021640	protein_coding	Naip1	ENSMUST00000022142	protein_coding	principal1	13	-1	100446511	5464
ENSMUSG00000035637	protein_coding	Grhpr	ENSMUST00000128973	protein_coding		4	1	44981403	349
ENSMUSG00000004085	protein_coding	Map3k20	ENSMUST00000144111	protein_coding		2	1	72297901	396
ENSMUSG00000087415	processed_pseudogene	Gm14529	ENSMUST00000117894	processed_pseudogene		X	1	20339299	406
ENSMUSG00000032899	protein_coding	Styk1	ENSMUST00000135859	processed_transcript		6	-1	131353597	422
ENSMUSG00000035637	protein_coding	Grhpr	ENSMUST00000151148	protein_coding		4	1	44981432	686
ENSMUSG00000114923	protein_coding	Gm49345	ENSMUST00000224814	protein_coding	principal5	13	-1	67637769	2103
ENSMUSG00000114923	protein_coding	Gm49345	ENSMUST00000225627	protein_coding	alternative2	13	-1	67637753	911
ENSMUSG00000032899	protein_coding	Styk1	ENSMUST00000145390	processed_transcript		6	-1	131353594	628
ENSMUSG00000097360	antisense	9430065F17Rik	ENSMUST00000223845	antisense		13	1	67553035	1380
ENSMUSG00000029402	protein_coding	Snrnp35	ENSMUST00000136567	protein_coding		5	1	124483202	449
ENSMUSG00000097360	antisense	9430065F17Rik	ENSMUST00000224521	antisense		13	1	67553035	1280
ENSMUSG00000032899	protein_coding	Styk1	ENSMUST00000204371	retained_intron		6	-1	131353597	1621
ENSMUSG00000040435	protein_coding	Ppp1r15a	ENSMUST00000042105	protein_coding	principal1	7	-1	45526268	2333
ENSMUSG00000031982	protein_coding	Arv1	ENSMUST00000034463	protein_coding	principal1	8	1	124722139	1165
ENSMUSG00000035637	protein_coding	Grhpr	ENSMUST00000150394	processed_transcript		4	1	44981433	701
ENSMUSG00000040302	protein_coding	Rbm48	ENSMUST00000042753	protein_coding	principal2	5	-1	3596585	2368
ENSMUSG00000029402	protein_coding	Snrnp35	ENSMUST00000111453	protein_coding	principal1	5	1	124483458	1181
ENSMUSG00000021640	protein_coding	Naip1	ENSMUST00000222155	protein_coding	principal1	13	-1	100452864	5361
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000121212	protein_coding	principal3	3	1	89164795	2154
ENSMUSG00000035637	protein_coding	Grhpr	ENSMUST00000151631	nonsense_mediated_decay		4	1	44981461	785
ENSMUSG00000029769	protein_coding	Ccdc136	ENSMUST00000115275	protein_coding	alternative2	6	1	29396630	3279
ENSMUSG00000074764	protein_coding	Sel1l2	ENSMUST00000122367	protein_coding	principal1	2	-1	140389704	2216
ENSMUSG00000031982	protein_coding	Arv1	ENSMUST00000212036	nonsense_mediated_decay		8	1	124722159	891
ENSMUSG00000035637	protein_coding	Grhpr	ENSMUST00000143589	processed_transcript		4	1	44981500	705
ENSMUSG00000020366	protein_coding	Mapk9	ENSMUST00000102778	protein_coding	alternative1	11	1	49854213	4447
ENSMUSG00000109213	unprocessed_pseudogene	Olfr499-ps1	ENSMUST00000208811	unprocessed_pseudogene		7	-1	108477407	930
ENSMUSG00000053175	protein_coding	Bcl3	ENSMUST00000120537	protein_coding	principal1	7	-1	19822770	1850
ENSMUSG00000040302	protein_coding	Rbm48	ENSMUST00000176000	nonsense_mediated_decay		5	-1	3596059	853
ENSMUSG00000031982	protein_coding	Arv1	ENSMUST00000212959	protein_coding		8	1	124728403	937
ENSMUSG00000057098	protein_coding	Ebf1	ENSMUST00000149997	processed_transcript		11	1	44618116	3968
ENSMUSG00000042350	protein_coding	Arel1	ENSMUST00000043169	protein_coding	principal1	12	-1	84970900	5446
ENSMUSG00000040435	protein_coding	Ppp1r15a	ENSMUST00000167273	protein_coding	principal1	7	-1	45526146	2809
ENSMUSG00000097360	antisense	9430065F17Rik	ENSMUST00000224664	antisense		13	1	67553202	275
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000152205	protein_coding		3	1	89164817	593
ENSMUSG00000021640	protein_coding	Naip1	ENSMUST00000221943	nonsense_mediated_decay		13	-1	100446461	4609
ENSMUSG00000029769	protein_coding	Ccdc136	ENSMUST00000145310	protein_coding	alternative2	6	1	29396643	1703
ENSMUSG00000040302	protein_coding	Rbm48	ENSMUST00000135809	retained_intron		5	-1	3592142	498
ENSMUSG00000074764	protein_coding	Sel1l2	ENSMUST00000120133	protein_coding		2	-1	140389706	579
ENSMUSG00000020366	protein_coding	Mapk9	ENSMUST00000151695	processed_transcript		11	1	49854230	950
ENSMUSG00000108939	unprocessed_pseudogene	Olfr500-ps1	ENSMUST00000208818	unprocessed_pseudogene		7	1	108485908	933
ENSMUSG00000057098	protein_coding	Ebf1	ENSMUST00000135993	processed_transcript		11	1	44618179	673
ENSMUSG00000108398	protein_coding	Gm30191	ENSMUST00000205501	protein_coding	principal1	4	1	134246935	647
ENSMUSG00000053175	protein_coding	Bcl3	ENSMUST00000152768	retained_intron		7	-1	19811889	502
ENSMUSG00000021640	protein_coding	Naip1	ENSMUST00000221727	protein_coding		13	-1	100452869	1968
ENSMUSG00000059291	protein_coding	Rpl11	ENSMUST00000102536	protein_coding	principal1	4	-1	136053393	833
ENSMUSG00000097360	antisense	9430065F17Rik	ENSMUST00000180908	antisense		13	1	67553234	1084
ENSMUSG00000074764	protein_coding	Sel1l2	ENSMUST00000134475	processed_transcript		2	-1	140296828	521
ENSMUSG00000040302	protein_coding	Rbm48	ENSMUST00000124162	retained_intron		5	-1	3596082	641
ENSMUSG00000057098	protein_coding	Ebf1	ENSMUST00000138452	processed_transcript		11	1	44621761	349
ENSMUSG00000025364	protein_coding	Pa2g4	ENSMUST00000026425	protein_coding	principal1	10	-1	128565934	2432
ENSMUSG00000042350	protein_coding	Arel1	ENSMUST00000163372	nonsense_mediated_decay		12	-1	84943378	706
ENSMUSG00000020366	protein_coding	Mapk9	ENSMUST00000109178	protein_coding	alternative1	11	1	49854257	1302
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000090927	protein_coding	alternative1	3	1	89164818	2128
ENSMUSG00000097360	antisense	9430065F17Rik	ENSMUST00000180824	antisense		13	1	67553263	533
ENSMUSG00000084137	processed_pseudogene	Gm9085	ENSMUST00000119994	processed_pseudogene		X	-1	20383821	1072
ENSMUSG00000059291	protein_coding	Rpl11	ENSMUST00000133613	processed_transcript		4	-1	136050526	317
ENSMUSG00000053175	protein_coding	Bcl3	ENSMUST00000123375	retained_intron		7	-1	19812833	694
ENSMUSG00000020366	protein_coding	Mapk9	ENSMUST00000043321	protein_coding	alternative1	11	1	49854257	1297
ENSMUSG00000042350	protein_coding	Arel1	ENSMUST00000169161	protein_coding		12	-1	84946923	644
ENSMUSG00000030008	protein_coding	Pradc1	ENSMUST00000126805	protein_coding		6	-1	85451970	953
ENSMUSG00000109415	unprocessed_pseudogene	Olfr1460-ps1	ENSMUST00000208975	unprocessed_pseudogene		19	1	13158200	899
ENSMUSG00000082855	processed_pseudogene	Gm14537	ENSMUST00000117464	processed_pseudogene		X	1	20391709	599
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000148265	protein_coding		3	1	89164819	822
ENSMUSG00000053175	protein_coding	Bcl3	ENSMUST00000141996	processed_transcript		7	-1	19815996	346
ENSMUSG00000059291	protein_coding	Rpl11	ENSMUST00000125726	processed_transcript		4	-1	136052996	807
ENSMUSG00000061361	protein_coding	Olfr168	ENSMUST00000213480	protein_coding	principal1	16	-1	19535555	2205
ENSMUSG00000030008	protein_coding	Pradc1	ENSMUST00000146086	retained_intron		6	-1	85451201	955
ENSMUSG00000050022	protein_coding	Amz1	ENSMUST00000126975	processed_transcript		5	1	140724127	1241
ENSMUSG00000040302	protein_coding	Rbm48	ENSMUST00000121877	protein_coding	alternative2	5	-1	3596202	617
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000111535	protein_coding	principal2	6	-1	149188712	1457
ENSMUSG00000029769	protein_coding	Ccdc136	ENSMUST00000181464	protein_coding	principal3	6	1	29398926	3444
ENSMUSG00000059291	protein_coding	Rpl11	ENSMUST00000155873	protein_coding		4	-1	136053090	622
ENSMUSG00000042350	protein_coding	Arel1	ENSMUST00000165093	protein_coding		12	-1	84945398	367
ENSMUSG00000061361	protein_coding	Olfr168	ENSMUST00000078554	protein_coding	principal1	16	-1	19530918	939
ENSMUSG00000053175	protein_coding	Bcl3	ENSMUST00000139680	processed_transcript		7	-1	19822157	460
ENSMUSG00000104950	antisense	4833413G10Rik	ENSMUST00000199632	antisense		5	-1	3631722	1946
ENSMUSG00000025364	protein_coding	Pa2g4	ENSMUST00000131728	protein_coding	principal1	10	-1	128565987	2483
ENSMUSG00000029769	protein_coding	Ccdc136	ENSMUST00000180829	protein_coding	alternative2	6	1	29398926	3169
ENSMUSG00000032198	protein_coding	Dock6	ENSMUST00000217336	protein_coding	principal2	9	-1	21852635	6880
ENSMUSG00000047716	protein_coding	Olfr736	ENSMUST00000215263	protein_coding	principal1	14	1	50381163	2255
ENSMUSG00000030008	protein_coding	Pradc1	ENSMUST00000113770	protein_coding		6	-1	85451248	610
ENSMUSG00000007415	protein_coding	Gatad1	ENSMUST00000140871	protein_coding		5	-1	3641539	1285
ENSMUSG00000059291	protein_coding	Rpl11	ENSMUST00000147059	processed_transcript		4	-1	136052754	482
ENSMUSG00000042350	protein_coding	Arel1	ENSMUST00000167448	protein_coding		12	-1	84970856	725
ENSMUSG00000047716	protein_coding	Olfr736	ENSMUST00000213402	protein_coding	principal1	14	1	50381163	2402
ENSMUSG00000059291	protein_coding	Rpl11	ENSMUST00000142440	processed_transcript		4	-1	136052706	917
ENSMUSG00000047716	protein_coding	Olfr736	ENSMUST00000213755	protein_coding	principal1	14	1	50381163	2338
ENSMUSG00000030008	protein_coding	Pradc1	ENSMUST00000139875	processed_transcript		6	-1	85451945	1000
ENSMUSG00000047716	protein_coding	Olfr736	ENSMUST00000215227	protein_coding	principal1	14	1	50381163	2485
ENSMUSG00000118220	processed_pseudogene	Gm6192	ENSMUST00000236907	processed_pseudogene		19	-1	7961107	1365
ENSMUSG00000059291	protein_coding	Rpl11	ENSMUST00000150565	processed_transcript		4	-1	136052716	843
ENSMUSG00000029769	protein_coding	Ccdc136	ENSMUST00000154619	protein_coding	alternative2	6	1	29402869	3356
ENSMUSG00000030008	protein_coding	Pradc1	ENSMUST00000154918	processed_transcript		6	-1	85451224	378
ENSMUSG00000042350	protein_coding	Arel1	ENSMUST00000165886	protein_coding		12	-1	84970838	369
ENSMUSG00000047716	protein_coding	Olfr736	ENSMUST00000058965	protein_coding	principal1	14	1	50392758	939
ENSMUSG00000025364	protein_coding	Pa2g4	ENSMUST00000147068	retained_intron		10	-1	128565869	684
ENSMUSG00000029918	protein_coding	Mrps33	ENSMUST00000031978	protein_coding	principal1	6	-1	39810988	1107
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000127743	retained_intron		6	-1	149173371	3273
ENSMUSG00000029769	protein_coding	Ccdc136	ENSMUST00000202726	protein_coding		6	1	29410105	640
ENSMUSG00000059291	protein_coding	Rpl11	ENSMUST00000128733	processed_transcript		4	-1	136053428	397
ENSMUSG00000047155	protein_coding	Cyp4x1	ENSMUST00000106545	protein_coding	alternative2	4	-1	115134281	4187
ENSMUSG00000030008	protein_coding	Pradc1	ENSMUST00000203934	retained_intron		6	-1	85451256	941
ENSMUSG00000032198	protein_coding	Dock6	ENSMUST00000215729	nonsense_mediated_decay		9	-1	21817915	3426
ENSMUSG00000042350	protein_coding	Arel1	ENSMUST00000168713	processed_transcript		12	-1	84966030	668
ENSMUSG00000030008	protein_coding	Pradc1	ENSMUST00000122907	processed_transcript		6	-1	85451213	339
ENSMUSG00000032198	protein_coding	Dock6	ENSMUST00000034728	protein_coding	alternative2	9	-1	21852635	6467
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000162112	protein_coding	principal3	12	-1	16800684	8058
ENSMUSG00000083383	unprocessed_pseudogene	Olfr595-ps1	ENSMUST00000118180	unprocessed_pseudogene		7	1	103235632	954
ENSMUSG00000029769	protein_coding	Ccdc136	ENSMUST00000127611	processed_transcript		6	1	29412484	539
ENSMUSG00000020366	protein_coding	Mapk9	ENSMUST00000109179	protein_coding	alternative1	11	1	49846751	4682
ENSMUSG00000047155	protein_coding	Cyp4x1	ENSMUST00000051400	protein_coding	principal2	4	-1	115133977	1524
ENSMUSG00000029769	protein_coding	Ccdc136	ENSMUST00000143599	processed_transcript		6	1	29414952	466
ENSMUSG00000020366	protein_coding	Mapk9	ENSMUST00000178543	protein_coding	alternative1	11	1	49846751	4677
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000159120	protein_coding	alternative2	12	-1	16757195	6346
ENSMUSG00000029769	protein_coding	Ccdc136	ENSMUST00000096084	protein_coding	alternative2	6	1	29396685	3826
ENSMUSG00000020444	protein_coding	Guk1	ENSMUST00000170202	protein_coding	principal1	11	-1	59191952	1078
ENSMUSG00000020366	protein_coding	Mapk9	ENSMUST00000164643	protein_coding	alternative1	11	1	49846751	4682
ENSMUSG00000032198	protein_coding	Dock6	ENSMUST00000217310	processed_transcript		9	-1	21804001	551
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000160851	retained_intron		12	-1	16675040	507
ENSMUSG00000032198	protein_coding	Dock6	ENSMUST00000216626	protein_coding		9	-1	21833627	1508
ENSMUSG00000029918	protein_coding	Mrps33	ENSMUST00000114797	protein_coding		6	-1	39810885	500
ENSMUSG00000086896	antisense	Cyp4x1os	ENSMUST00000153951	antisense		4	1	115133832	2003
ENSMUSG00000022548	protein_coding	Apod	ENSMUST00000130560	protein_coding	principal1	16	-1	31314808	2074
ENSMUSG00000091700	protein_coding	Gm7876	ENSMUST00000169465	protein_coding	alternative2	14	1	4709238	984
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000160755	retained_intron		12	-1	16690802	738
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000150610	processed_transcript		6	-1	149188664	1071
ENSMUSG00000020444	protein_coding	Guk1	ENSMUST00000170895	protein_coding		11	-1	59187741	743
ENSMUSG00000029918	protein_coding	Mrps33	ENSMUST00000201461	protein_coding		6	-1	39806042	717
ENSMUSG00000091700	protein_coding	Gm7876	ENSMUST00000171305	protein_coding	principal5	14	1	4709296	1758
ENSMUSG00000022548	protein_coding	Apod	ENSMUST00000115230	protein_coding	principal1	16	-1	31314804	1070
ENSMUSG00000029918	protein_coding	Mrps33	ENSMUST00000139992	retained_intron		6	-1	39810893	400
ENSMUSG00000106936	processed_pseudogene	Gm7554	ENSMUST00000202282	processed_pseudogene		6	-1	39828773	574
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000095319	protein_coding	alternative2	6	-1	149188685	1369
ENSMUSG00000097100	antisense	9230104M06Rik	ENSMUST00000180971	antisense		12	1	112999964	1963
ENSMUSG00000020444	protein_coding	Guk1	ENSMUST00000151211	retained_intron		11	-1	59185455	511
ENSMUSG00000106827	processed_pseudogene	Gm7556	ENSMUST00000201178	processed_pseudogene		6	-1	39844295	1084
ENSMUSG00000113519	sense_intronic	Gm47541	ENSMUST00000222117	sense_intronic		12	-1	112972145	401
ENSMUSG00000020444	protein_coding	Guk1	ENSMUST00000154386	retained_intron		11	-1	59184854	451
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000134181	processed_transcript		6	-1	149183492	623
ENSMUSG00000050022	protein_coding	Amz1	ENSMUST00000060918	protein_coding	principal1	5	1	140724127	2683
ENSMUSG00000022837	protein_coding	Iqcb1	ENSMUST00000114819	protein_coding		16	1	36828407	2797
ENSMUSG00000094628	protein_coding	Gm3252	ENSMUST00000165619	protein_coding	principal1	14	1	4726775	1949
ENSMUSG00000020444	protein_coding	Guk1	ENSMUST00000130815	retained_intron		11	-1	59191812	436
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000156864	nonsense_mediated_decay		6	-1	149183489	761
ENSMUSG00000094628	protein_coding	Gm3252	ENSMUST00000178748	protein_coding		14	1	4741737	450
ENSMUSG00000022548	protein_coding	Apod	ENSMUST00000023207	retained_intron		16	-1	31314594	979
ENSMUSG00000050022	protein_coding	Amz1	ENSMUST00000177057	processed_transcript		5	1	140724138	455
ENSMUSG00000020444	protein_coding	Guk1	ENSMUST00000172714	protein_coding		11	-1	59192212	140
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000204681	processed_transcript		6	-1	149188681	355
ENSMUSG00000007415	protein_coding	Gatad1	ENSMUST00000007559	protein_coding	principal2	5	-1	3647934	2545
ENSMUSG00000071291	protein_coding	Zfp58	ENSMUST00000171518	protein_coding	principal1	13	-1	67500503	2300
ENSMUSG00000022548	protein_coding	Apod	ENSMUST00000156456	retained_intron		16	-1	31303445	371
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000149149	retained_intron		6	-1	149188670	492
ENSMUSG00000022548	protein_coding	Apod	ENSMUST00000155682	retained_intron		16	-1	31303678	422
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000161036	retained_intron		12	-1	16740254	4823
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000030286	protein_coding	alternative2	4	-1	99120915	7127
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000152062	processed_transcript		6	-1	149188695	496
ENSMUSG00000022548	protein_coding	Apod	ENSMUST00000145837	retained_intron		16	-1	31311348	362
ENSMUSG00000050022	protein_coding	Amz1	ENSMUST00000120630	protein_coding	principal1	5	1	140735526	4037
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000110636	protein_coding	principal1	13	-1	9765314	4117
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000160575	retained_intron		12	-1	16708023	713
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000141346	protein_coding		6	-1	149188687	671
ENSMUSG00000007415	protein_coding	Gatad1	ENSMUST00000196304	protein_coding		5	-1	3657185	704
ENSMUSG00000067656	protein_coding	Slc22a27	ENSMUST00000182102	protein_coding		19	-1	7966000	1801
ENSMUSG00000110204	polymorphic_pseudogene	Olfr501-ps1	ENSMUST00000094105	polymorphic_pseudogene	principal1	7	1	108508058	946
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000159044	retained_intron		12	-1	16708454	805
ENSMUSG00000071291	protein_coding	Zfp58	ENSMUST00000076123	protein_coding	principal1	13	-1	67500555	2391
ENSMUSG00000057321	protein_coding	Usp17ld	ENSMUST00000073394	protein_coding	principal1	7	-1	103252505	1987
ENSMUSG00000050022	protein_coding	Amz1	ENSMUST00000156006	processed_transcript		5	1	140735567	426
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000160347	protein_coding		12	-1	16708594	362
ENSMUSG00000022837	protein_coding	Iqcb1	ENSMUST00000023535	protein_coding	principal1	16	1	36828408	2257
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000110637	protein_coding		13	-1	9764423	3770
ENSMUSG00000050022	protein_coding	Amz1	ENSMUST00000155644	retained_intron		5	1	140743884	350
ENSMUSG00000068250	protein_coding	Amn1	ENSMUST00000203043	retained_intron		6	-1	149188702	15841
ENSMUSG00000071291	protein_coding	Zfp58	ENSMUST00000091523	protein_coding		13	-1	67500487	820
ENSMUSG00000007415	protein_coding	Gatad1	ENSMUST00000119783	protein_coding	alternative2	5	-1	3647806	1278
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000160627	nonsense_mediated_decay		12	-1	16711773	594
ENSMUSG00000091221	processed_pseudogene	Gm3084	ENSMUST00000169967	processed_pseudogene		14	-1	4756319	598
ENSMUSG00000058014	protein_coding	Olfr502	ENSMUST00000216919	protein_coding	principal1	7	-1	108525065	3282
ENSMUSG00000067656	protein_coding	Slc22a27	ENSMUST00000075619	protein_coding	principal1	19	-1	7966027	2152
ENSMUSG00000104891	antisense	2510017J16Rik	ENSMUST00000198718	antisense		5	1	3585112	1263
ENSMUSG00000050022	protein_coding	Amz1	ENSMUST00000176035	nonsense_mediated_decay		5	1	140749283	2402
ENSMUSG00000071291	protein_coding	Zfp58	ENSMUST00000163534	protein_coding		13	-1	67500444	613
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000159573	retained_intron		12	-1	16740128	978
ENSMUSG00000028280	protein_coding	Gabrr1	ENSMUST00000029947	protein_coding	principal1	4	1	33132521	2286
ENSMUSG00000038214	protein_coding	Bend3	ENSMUST00000167488	protein_coding	principal1	10	1	43478831	6337
ENSMUSG00000058014	protein_coding	Olfr502	ENSMUST00000078933	protein_coding	principal1	7	-1	108523967	1059
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000110638	protein_coding		13	-1	9764488	4003
ENSMUSG00000022837	protein_coding	Iqcb1	ENSMUST00000232162	processed_transcript		16	1	36828447	796
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000161998	protein_coding		12	-1	16800886	903
ENSMUSG00000022837	protein_coding	Iqcb1	ENSMUST00000137076	retained_intron		16	1	36846989	2417
ENSMUSG00000109250	processed_pseudogene	Gm5053	ENSMUST00000208361	processed_pseudogene		7	-1	108529074	1678
ENSMUSG00000101020	unprocessed_pseudogene	Gm28377	ENSMUST00000189695	unprocessed_pseudogene		Y	-1	76319879	720
ENSMUSG00000038214	protein_coding	Bend3	ENSMUST00000216679	protein_coding		10	1	43485234	670
ENSMUSG00000022837	protein_coding	Iqcb1	ENSMUST00000142619	processed_transcript		16	1	36847394	462
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000138822	retained_intron		3	1	89164819	3168
ENSMUSG00000032198	protein_coding	Dock6	ENSMUST00000217515	retained_intron		9	-1	21852618	3130
ENSMUSG00000116973	lincRNA	AV205837	ENSMUST00000231745	lincRNA		16	1	31325235	1198
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000059743	protein_coding	principal1	1	1	91250311	1154
ENSMUSG00000036523	protein_coding	Greb1	ENSMUST00000048064	protein_coding	principal3	12	-1	16757241	7940
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000121931	protein_coding	alternative1	3	1	89164840	2112
ENSMUSG00000114049	antisense	Gm48140	ENSMUST00000223113	antisense		12	1	16672240	2057
ENSMUSG00000097882	antisense	0610038B21Rik	ENSMUST00000184762	antisense		8	1	77517056	1524
ENSMUSG00000032198	protein_coding	Dock6	ENSMUST00000213296	processed_transcript		9	-1	21852616	1868
ENSMUSG00000038214	protein_coding	Bend3	ENSMUST00000214116	protein_coding		10	1	43493165	746
ENSMUSG00000032198	protein_coding	Dock6	ENSMUST00000213775	retained_intron		9	-1	21852616	1324
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000128318	nonsense_mediated_decay		3	1	89164979	1885
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000206128	processed_transcript		4	-1	98952442	1507
ENSMUSG00000060759	protein_coding	Olfr503	ENSMUST00000211693	protein_coding	alternative1	7	1	108544533	966
ENSMUSG00000097882	antisense	0610038B21Rik	ENSMUST00000181420	antisense		8	1	77518115	1687
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000062658	protein_coding		13	-1	9765160	3796
ENSMUSG00000060759	protein_coding	Olfr503	ENSMUST00000078162	protein_coding	principal2	7	1	108544527	972
ENSMUSG00000038214	protein_coding	Bend3	ENSMUST00000040147	protein_coding	principal1	10	1	43479140	5882
ENSMUSG00000101931	lincRNA	Gm28108	ENSMUST00000186747	lincRNA		Y	1	87709966	1497
ENSMUSG00000022837	protein_coding	Iqcb1	ENSMUST00000129123	processed_transcript		16	1	36851252	546
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000133323	retained_intron		3	1	89167164	888
ENSMUSG00000029710	protein_coding	Ephb4	ENSMUST00000061244	protein_coding	principal3	5	1	137350109	4340
ENSMUSG00000110258	antisense	Gm45406	ENSMUST00000210161	antisense		8	1	77282861	1637
ENSMUSG00000031492	protein_coding	Chrnb3	ENSMUST00000060943	protein_coding	principal4	8	1	27368711	4589
ENSMUSG00000115997	processed_pseudogene	Gm49404	ENSMUST00000229414	processed_pseudogene		16	1	31344147	359
ENSMUSG00000022837	protein_coding	Iqcb1	ENSMUST00000153373	processed_transcript		16	1	36851593	221
ENSMUSG00000109873	TEC	Gm45407	ENSMUST00000209499	TEC		8	-1	77372516	3676
ENSMUSG00000101931	lincRNA	Gm28108	ENSMUST00000191442	lincRNA		Y	1	87710417	438
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000137932	retained_intron		13	-1	9691273	4355
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000153255	retained_intron		3	1	89172165	2203
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000110635	protein_coding		13	-1	9764470	3881
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000127417	protein_coding	alternative2	4	-1	99120762	6796
ENSMUSG00000110410	antisense	4933421D24Rik	ENSMUST00000209302	antisense		8	1	77305533	1286
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000132830	retained_intron		3	1	89173955	906
ENSMUSG00000031492	protein_coding	Chrnb3	ENSMUST00000211104	protein_coding		8	1	27368768	3241
ENSMUSG00000029710	protein_coding	Ephb4	ENSMUST00000144296	nonsense_mediated_decay		5	1	137350141	3894
ENSMUSG00000000149	protein_coding	Gna12	ENSMUST00000000153	protein_coding	principal1	5	-1	140830431	3416
ENSMUSG00000060105	protein_coding	Olfr504	ENSMUST00000075595	protein_coding	principal1	7	-1	108565793	958
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000110634	protein_coding	principal1	13	-1	9764956	3824
ENSMUSG00000106261	lincRNA	Gm34086	ENSMUST00000196486	lincRNA		5	1	124032361	743
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000171165	protein_coding	principal1	1	1	91250337	5654
ENSMUSG00000068917	protein_coding	Clk2	ENSMUST00000139221	processed_transcript		3	1	89175035	399
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000222038	retained_intron		13	-1	9690885	1591
ENSMUSG00000000149	protein_coding	Gna12	ENSMUST00000198447	protein_coding		5	-1	140830157	1306
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000124466	nonsense_mediated_decay		4	-1	99023390	4975
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000110633	protein_coding		13	-1	9720928	1857
ENSMUSG00000101234	transcribed_processed_pseudogene	1700007E05Rik	ENSMUST00000186196	processed_transcript		16	-1	31378018	1513
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000222475	protein_coding		13	-1	9735449	1551
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000075836	protein_coding	alternative2	4	-1	99120762	6704
ENSMUSG00000047822	protein_coding	Angptl8	ENSMUST00000058777	protein_coding	principal1	9	1	21835510	865
ENSMUSG00000031492	protein_coding	Chrnb3	ENSMUST00000079463	protein_coding	alternative2	8	1	27368782	2255
ENSMUSG00000101234	transcribed_processed_pseudogene	1700007E05Rik	ENSMUST00000190494	transcribed_processed_pseudogene		16	-1	31379133	1499
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000137813	retained_intron		13	-1	9690510	651
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000191368	protein_coding	principal1	1	1	91250365	1110
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000223421	protein_coding		13	-1	9764873	1582
ENSMUSG00000011158	protein_coding	Brf1	ENSMUST00000011302	protein_coding	principal1	12	-1	113000704	2615
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000220996	nonsense_mediated_decay		13	-1	9764350	650
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000205650	protein_coding	principal3	4	-1	99120762	6297
ENSMUSG00000108837	processed_pseudogene	Gm44865	ENSMUST00000207240	processed_pseudogene		7	1	108566845	531
ENSMUSG00000018973	protein_coding	Hoxb1	ENSMUST00000019117	protein_coding	principal1	11	1	96365752	2086
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000171112	protein_coding	principal1	1	1	91250566	1547
ENSMUSG00000109306	processed_pseudogene	Gm18410	ENSMUST00000207199	processed_pseudogene		7	-1	108566826	577
ENSMUSG00000028995	protein_coding	Fam126a	ENSMUST00000126828	processed_transcript		5	-1	23922904	501
ENSMUSG00000026701	protein_coding	Prdx6	ENSMUST00000071718	protein_coding	principal1	1	-1	161251219	2387
ENSMUSG00000029710	protein_coding	Ephb4	ENSMUST00000111055	protein_coding	alternative2	5	1	137350172	4296
ENSMUSG00000114212	protein_coding	Gm47985	ENSMUST00000225278	protein_coding	principal1	1	1	151182537	1707
ENSMUSG00000011158	protein_coding	Brf1	ENSMUST00000221754	retained_intron		12	-1	112961429	455
ENSMUSG00000116690	lincRNA	Gm49736	ENSMUST00000231511	lincRNA		16	1	31412467	1391
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000140225	retained_intron		4	-1	98945205	609
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000157035	nonsense_mediated_decay		13	-1	9765330	1365
ENSMUSG00000011158	protein_coding	Brf1	ENSMUST00000221537	retained_intron		12	-1	112962514	792
ENSMUSG00000018973	protein_coding	Hoxb1	ENSMUST00000123805	processed_transcript		11	1	96366258	781
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000191533	protein_coding		1	1	91250656	382
ENSMUSG00000116690	lincRNA	Gm49736	ENSMUST00000231871	lincRNA		16	1	31414055	960
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000205484	retained_intron		4	-1	98948386	4131
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000138039	retained_intron		13	-1	9696139	609
ENSMUSG00000029710	protein_coding	Ephb4	ENSMUST00000111054	protein_coding		5	1	137350513	3784
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000124040	processed_transcript		4	-1	98954846	640
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000130151	protein_coding		13	-1	9765270	987
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000189589	retained_intron		1	1	91264587	823
ENSMUSG00000114943	protein_coding	Gm8947	ENSMUST00000224330	protein_coding	principal1	1	1	151192376	1679
ENSMUSG00000080802	processed_pseudogene	Gm13804	ENSMUST00000119552	processed_pseudogene		2	1	98291403	172
ENSMUSG00000098144	lincRNA	1700029N11Rik	ENSMUST00000190628	lincRNA		13	1	44439712	574
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000154994	protein_coding		13	-1	9764444	867
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000187494	retained_intron		1	1	91274964	520
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000205652	nonsense_mediated_decay		4	-1	98958118	385
ENSMUSG00000075587	processed_pseudogene	Gm11531	ENSMUST00000117614	processed_pseudogene		11	1	96392112	555
ENSMUSG00000114694	protein_coding	Gm47995	ENSMUST00000225273	protein_coding	principal1	1	1	151198448	903
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000139152	retained_intron		4	-1	98962216	690
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000222927	retained_intron		13	-1	9695301	164
ENSMUSG00000097333	protein_coding	Zfp87	ENSMUST00000181767	protein_coding	principal1	13	-1	67526177	2656
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000128658	protein_coding		13	-1	9764937	676
ENSMUSG00000115842	lincRNA	Gm49092	ENSMUST00000226550	lincRNA		17	-1	23573427	936
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000185950	retained_intron		1	1	91276111	587
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000152725	protein_coding		13	-1	9765321	789
ENSMUSG00000114582	protein_coding	3110040M04Rik	ENSMUST00000224012	protein_coding	principal1	1	1	151204121	945
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000185697	retained_intron		1	1	91283652	1365
ENSMUSG00000031540	protein_coding	Kat6a	ENSMUST00000238975	protein_coding	alternative2	8	1	22859535	9191
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000140848	processed_transcript		4	-1	98960314	371
ENSMUSG00000029710	protein_coding	Ephb4	ENSMUST00000166239	protein_coding	principal3	5	1	137350430	3741
ENSMUSG00000098144	lincRNA	1700029N11Rik	ENSMUST00000182568	lincRNA		13	1	44439727	567
ENSMUSG00000097333	protein_coding	Zfp87	ENSMUST00000180536	nonsense_mediated_decay		13	-1	67526121	850
ENSMUSG00000082862	processed_pseudogene	Gm13806	ENSMUST00000117822	processed_pseudogene		2	1	98601030	325
ENSMUSG00000031540	protein_coding	Kat6a	ENSMUST00000110696	protein_coding	principal2	8	1	22859535	9041
ENSMUSG00000098144	lincRNA	1700029N11Rik	ENSMUST00000220639	lincRNA		13	1	44439736	1092
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000140180	nonsense_mediated_decay		13	-1	9735418	848
ENSMUSG00000011158	protein_coding	Brf1	ENSMUST00000223506	processed_transcript		12	-1	112986733	843
ENSMUSG00000114591	protein_coding	Gm47996	ENSMUST00000224757	protein_coding	principal1	1	1	151210131	942
ENSMUSG00000106476	processed_pseudogene	Rpl36-ps9	ENSMUST00000196458	processed_pseudogene		5	1	137432987	277
ENSMUSG00000098124	processed_pseudogene	Gm27036	ENSMUST00000182465	processed_pseudogene		13	-1	44439813	980
ENSMUSG00000034343	protein_coding	Ube2f	ENSMUST00000178627	protein_coding	principal1	1	1	91250319	1363
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000146059	protein_coding		13	-1	9764418	345
ENSMUSG00000075586	processed_transcript	Gm11529	ENSMUST00000153012	processed_transcript		11	-1	96464547	639
ENSMUSG00000097333	protein_coding	Zfp87	ENSMUST00000181341	protein_coding		13	-1	67526146	480
ENSMUSG00000011158	protein_coding	Brf1	ENSMUST00000221680	processed_transcript		12	-1	112986519	796
ENSMUSG00000098107	lincRNA	Gm27007	ENSMUST00000183264	lincRNA		13	-1	44455303	279
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000144642	protein_coding		13	-1	9735884	736
ENSMUSG00000101186	lincRNA	Gm29235	ENSMUST00000185786	lincRNA		2	-1	99357729	442
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000150254	protein_coding		4	-1	99009305	765
ENSMUSG00000011158	protein_coding	Brf1	ENSMUST00000221415	retained_intron		12	-1	112983104	3280
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000222358	protein_coding		13	-1	9765207	340
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000127946	protein_coding		4	-1	99009270	742
ENSMUSG00000011158	protein_coding	Brf1	ENSMUST00000221409	retained_intron		12	-1	112988060	556
ENSMUSG00000097333	protein_coding	Zfp87	ENSMUST00000181573	protein_coding		13	-1	67526177	382
ENSMUSG00000026701	protein_coding	Prdx6	ENSMUST00000192639	nonsense_mediated_decay		1	-1	161251186	1294
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000146039	protein_coding		13	-1	9764454	402
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000205783	retained_intron		4	-1	98994958	2330
ENSMUSG00000011158	protein_coding	Brf1	ENSMUST00000222247	retained_intron		12	-1	113000396	687
ENSMUSG00000020300	protein_coding	Cpeb4	ENSMUST00000109412	protein_coding	alternative1	11	1	31872226	6303
ENSMUSG00000021156	protein_coding	Zmynd11	ENSMUST00000222148	retained_intron		13	-1	9716057	3826
ENSMUSG00000078091	TEC	Gm10912	ENSMUST00000238272	TEC		2	1	104065797	1690
ENSMUSG00000031540	protein_coding	Kat6a	ENSMUST00000044331	protein_coding	principal2	8	1	22859549	9113
ENSMUSG00000011158	protein_coding	Brf1	ENSMUST00000223037	retained_intron		12	-1	113000432	600
ENSMUSG00000097470	processed_pseudogene	Gm26587	ENSMUST00000180795	processed_pseudogene		13	1	67660457	989
ENSMUSG00000078091	TEC	Gm10912	ENSMUST00000104891	TEC		2	1	104065826	1661
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000153362	processed_transcript		4	-1	99008480	609
ENSMUSG00000020300	protein_coding	Cpeb4	ENSMUST00000155278	protein_coding		11	1	31873275	5281
ENSMUSG00000031540	protein_coding	Kat6a	ENSMUST00000130718	processed_transcript		8	1	22913786	419
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000131386	nonsense_mediated_decay		4	-1	99055333	681
ENSMUSG00000109652	TEC	Gm45555	ENSMUST00000210028	TEC		8	1	22873589	2602
ENSMUSG00000028556	protein_coding	Dock7	ENSMUST00000206604	retained_intron		4	-1	99067111	3359
ENSMUSG00000002803	protein_coding	Btbd6	ENSMUST00000221500	protein_coding		12	1	112976487	373
ENSMUSG00000024293	protein_coding	Esco1	ENSMUST00000025142	protein_coding	principal2	18	-1	10610352	4545
ENSMUSG00000020300	protein_coding	Cpeb4	ENSMUST00000020543	protein_coding	principal2	11	1	31872211	2312
ENSMUSG00000114638	antisense	Gm31834	ENSMUST00000224471	antisense		13	1	38527403	3470
ENSMUSG00000094192	protein_coding	Olfr452	ENSMUST00000217701	protein_coding	principal1	6	1	42785093	2813
ENSMUSG00000114895	antisense	4930579J19Rik	ENSMUST00000224802	antisense		13	-1	38461799	903
ENSMUSG00000006050	protein_coding	Sra1	ENSMUST00000173875	protein_coding	principal1	18	-1	36670815	1979
ENSMUSG00000094192	protein_coding	Olfr452	ENSMUST00000215719	protein_coding	principal1	6	1	42785104	2728
ENSMUSG00000026701	protein_coding	Prdx6	ENSMUST00000156678	processed_transcript		1	-1	161251169	913
ENSMUSG00000094192	protein_coding	Olfr452	ENSMUST00000214465	protein_coding	principal1	6	1	42785104	1967
ENSMUSG00000094192	protein_coding	Olfr452	ENSMUST00000075468	protein_coding	principal1	6	1	42790041	954
ENSMUSG00000114895	antisense	4930579J19Rik	ENSMUST00000223826	antisense		13	-1	38461793	852
ENSMUSG00000114895	antisense	4930579J19Rik	ENSMUST00000225893	antisense		13	-1	38461805	1384
ENSMUSG00000092230	processed_pseudogene	Gm18889	ENSMUST00000174284	processed_pseudogene		15	-1	36120926	929
ENSMUSG00000113424	sense_intronic	Gm48161	ENSMUST00000222575	sense_intronic		13	1	30370359	1835
ENSMUSG00000024293	protein_coding	Esco1	ENSMUST00000127099	nonsense_mediated_decay		18	-1	10610352	4572
ENSMUSG00000026701	protein_coding	Prdx6	ENSMUST00000051925	protein_coding		1	-1	161251166	959
ENSMUSG00000002803	protein_coding	Btbd6	ENSMUST00000221104	protein_coding	alternative2	12	1	112976550	2085
ENSMUSG00000024293	protein_coding	Esco1	ENSMUST00000097670	protein_coding	alternative2	18	-1	10610129	2088
ENSMUSG00000026701	protein_coding	Prdx6	ENSMUST00000156318	processed_transcript		1	-1	161251121	874
ENSMUSG00000023068	protein_coding	Nus1	ENSMUST00000023830	protein_coding	principal1	10	1	52417547	4605
ENSMUSG00000024293	protein_coding	Esco1	ENSMUST00000115864	protein_coding	alternative2	18	-1	10610109	2148
ENSMUSG00000002803	protein_coding	Btbd6	ENSMUST00000223287	nonsense_mediated_decay		12	1	112976567	800
ENSMUSG00000006050	protein_coding	Sra1	ENSMUST00000173482	nonsense_mediated_decay		18	-1	36670286	871
ENSMUSG00000026701	protein_coding	Prdx6	ENSMUST00000139387	processed_transcript		1	-1	161250554	603
ENSMUSG00000006050	protein_coding	Sra1	ENSMUST00000236330	protein_coding		18	-1	36670290	760
ENSMUSG00000023068	protein_coding	Nus1	ENSMUST00000218983	retained_intron		10	1	52428931	566
ENSMUSG00000026701	protein_coding	Prdx6	ENSMUST00000155135	processed_transcript		1	-1	161251166	825
ENSMUSG00000002803	protein_coding	Btbd6	ENSMUST00000220567	retained_intron		12	1	112976574	832
ENSMUSG00000055560	protein_coding	Zfp459	ENSMUST00000056470	protein_coding	principal1	13	-1	67421418	3334
ENSMUSG00000026701	protein_coding	Prdx6	ENSMUST00000194613	retained_intron		1	-1	161251162	2558
ENSMUSG00000002803	protein_coding	Btbd6	ENSMUST00000222209	protein_coding		12	1	112976621	644
ENSMUSG00000002803	protein_coding	Btbd6	ENSMUST00000223368	protein_coding		12	1	112976825	691
ENSMUSG00000006050	protein_coding	Sra1	ENSMUST00000173202	retained_intron		18	-1	36670608	1299
ENSMUSG00000026701	protein_coding	Prdx6	ENSMUST00000130867	retained_intron		1	-1	161251162	967
ENSMUSG00000055560	protein_coding	Zfp459	ENSMUST00000224113	protein_coding		13	-1	67421364	646
ENSMUSG00000002803	protein_coding	Btbd6	ENSMUST00000223508	protein_coding		12	1	112976946	724
ENSMUSG00000097610	antisense	A930012L18Rik	ENSMUST00000181094	antisense		18	1	44661665	2364
ENSMUSG00000055560	protein_coding	Zfp459	ENSMUST00000223644	protein_coding		13	-1	67421399	441
ENSMUSG00000006050	protein_coding	Sra1	ENSMUST00000006209	protein_coding		18	-1	36670285	695
ENSMUSG00000097610	antisense	A930012L18Rik	ENSMUST00000202771	antisense		18	1	44662103	434
ENSMUSG00000055560	protein_coding	Zfp459	ENSMUST00000224496	retained_intron		13	-1	67421408	504
ENSMUSG00000060090	protein_coding	Rp2	ENSMUST00000033372	protein_coding	principal1	X	1	20364481	4417
ENSMUSG00000006050	protein_coding	Sra1	ENSMUST00000174125	retained_intron		18	-1	36670276	337
ENSMUSG00000002803	protein_coding	Btbd6	ENSMUST00000002880	protein_coding	principal4	12	1	112976563	2057
ENSMUSG00000002803	protein_coding	Btbd6	ENSMUST00000165079	protein_coding	alternative2	12	1	112976482	1975
ENSMUSG00000028553	protein_coding	Angptl3	ENSMUST00000030280	protein_coding	principal1	4	1	99030954	1482
ENSMUSG00000060090	protein_coding	Rp2	ENSMUST00000115391	protein_coding	principal1	X	1	20364481	1398
ENSMUSG00000049115	protein_coding	Agtr1a	ENSMUST00000143181	processed_transcript		13	1	30336441	501
ENSMUSG00000049115	protein_coding	Agtr1a	ENSMUST00000222503	protein_coding		13	1	30336441	444
ENSMUSG00000006526	protein_coding	Stimate	ENSMUST00000006701	protein_coding	principal1	14	1	30825590	3742
ENSMUSG00000049115	protein_coding	Agtr1a	ENSMUST00000222370	protein_coding		13	1	30336441	445
ENSMUSG00000068535	protein_coding	Olfr169	ENSMUST00000216070	protein_coding	principal1	16	-1	19571771	2328
ENSMUSG00000060090	protein_coding	Rp2	ENSMUST00000115387	protein_coding		X	1	20364559	4498
ENSMUSG00000028553	protein_coding	Angptl3	ENSMUST00000136091	processed_transcript		4	1	99033179	679
ENSMUSG00000068535	protein_coding	Olfr169	ENSMUST00000215476	protein_coding	principal1	16	-1	19571809	2476
ENSMUSG00000039004	protein_coding	Bmp6	ENSMUST00000171970	protein_coding	principal1	13	1	38345107	3593
ENSMUSG00000024293	protein_coding	Esco1	ENSMUST00000145320	protein_coding		18	-1	10610109	2249
ENSMUSG00000068535	protein_coding	Olfr169	ENSMUST00000215040	protein_coding	principal1	16	-1	19571750	2316
ENSMUSG00000037098	protein_coding	Rab11fip3	ENSMUST00000118828	protein_coding		17	-1	26021860	3271
ENSMUSG00000028553	protein_coding	Angptl3	ENSMUST00000125546	processed_transcript		4	1	99033203	2399
ENSMUSG00000060090	protein_coding	Rp2	ENSMUST00000134349	nonsense_mediated_decay		X	1	20364575	1545
ENSMUSG00000068535	protein_coding	Olfr169	ENSMUST00000090062	protein_coding	principal1	16	-1	19566881	942
ENSMUSG00000006526	protein_coding	Stimate	ENSMUST00000227246	nonsense_mediated_decay		14	1	30825590	3822
ENSMUSG00000018239	protein_coding	Zcchc10	ENSMUST00000018383	protein_coding	principal1	11	1	53324679	1267
ENSMUSG00000025813	protein_coding	Homer2	ENSMUST00000207983	protein_coding	principal3	7	-1	81706809	1634
ENSMUSG00000039004	protein_coding	Bmp6	ENSMUST00000224452	processed_transcript		13	1	38346153	671
ENSMUSG00000087395	antisense	Gm12705	ENSMUST00000129460	antisense		4	1	99116414	872
ENSMUSG00000049115	protein_coding	Agtr1a	ENSMUST00000066412	protein_coding	principal1	13	1	30336441	2199
ENSMUSG00000006526	protein_coding	Stimate	ENSMUST00000228066	nonsense_mediated_decay		14	1	30825594	640
ENSMUSG00000060090	protein_coding	Rp2	ENSMUST00000133619	nonsense_mediated_decay		X	1	20364619	1615
ENSMUSG00000107965	processed_pseudogene	Gm44259	ENSMUST00000204996	processed_pseudogene		6	-1	125258008	298
ENSMUSG00000018239	protein_coding	Zcchc10	ENSMUST00000141585	nonsense_mediated_decay		11	1	53327400	375
ENSMUSG00000024293	protein_coding	Esco1	ENSMUST00000234347	processed_transcript		18	-1	10610075	665
ENSMUSG00000039004	protein_coding	Bmp6	ENSMUST00000223628	protein_coding		13	1	38394445	594
ENSMUSG00000030007	protein_coding	Cct7	ENSMUST00000032078	protein_coding	principal1	6	1	85451514	2441
ENSMUSG00000006526	protein_coding	Stimate	ENSMUST00000227776	processed_transcript		14	1	30866445	1156
ENSMUSG00000025813	protein_coding	Homer2	ENSMUST00000026922	protein_coding	alternative1	7	-1	81706944	1736
ENSMUSG00000024293	protein_coding	Esco1	ENSMUST00000234090	processed_transcript		18	-1	10610255	852
ENSMUSG00000006526	protein_coding	Stimate	ENSMUST00000228046	retained_intron		14	1	30870512	433
ENSMUSG00000049115	protein_coding	Agtr1a	ENSMUST00000223201	protein_coding		13	1	30336444	445
ENSMUSG00000024293	protein_coding	Esco1	ENSMUST00000234550	processed_transcript		18	-1	10610063	736
ENSMUSG00000028860	protein_coding	Sytl1	ENSMUST00000105908	protein_coding		4	-1	133263087	1730
ENSMUSG00000062012	protein_coding	Zfp13	ENSMUST00000115516	protein_coding	alternative2	17	-1	23586232	2104
ENSMUSG00000029408	protein_coding	Abcb9	ENSMUST00000031354	protein_coding	principal1	5	-1	124095798	3661
ENSMUSG00000030007	protein_coding	Cct7	ENSMUST00000205094	retained_intron		6	1	85452019	3884
ENSMUSG00000024293	protein_coding	Esco1	ENSMUST00000234151	retained_intron		18	-1	10610132	643
ENSMUSG00000006526	protein_coding	Stimate	ENSMUST00000226788	retained_intron		14	1	30872355	968
ENSMUSG00000049686	protein_coding	Orai1	ENSMUST00000121652	protein_coding	principal1	5	1	123015074	1875
ENSMUSG00000082171	processed_pseudogene	Rpl27-ps2	ENSMUST00000120378	processed_pseudogene		11	1	101939501	399
ENSMUSG00000049115	protein_coding	Agtr1a	ENSMUST00000221743	protein_coding		13	1	30345541	436
ENSMUSG00000098678	protein_coding	Mroh6	ENSMUST00000184858	protein_coding	principal1	15	-1	75888770	2216
ENSMUSG00000049686	protein_coding	Orai1	ENSMUST00000152213	processed_transcript		5	1	123015338	1065
ENSMUSG00000049686	protein_coding	Orai1	ENSMUST00000051016	protein_coding	principal1	5	1	123015074	1482
ENSMUSG00000062012	protein_coding	Zfp13	ENSMUST00000057029	protein_coding	principal2	17	-1	23599487	2139
ENSMUSG00000030007	protein_coding	Cct7	ENSMUST00000204489	nonsense_mediated_decay		6	1	85452052	1561
ENSMUSG00000105979	TEC	Gm43411	ENSMUST00000196235	TEC		5	-1	122908400	1579
ENSMUSG00000062012	protein_coding	Zfp13	ENSMUST00000228942	retained_intron		17	-1	23580295	655
ENSMUSG00000030007	protein_coding	Cct7	ENSMUST00000204592	protein_coding		6	1	85452092	1544
ENSMUSG00000062012	protein_coding	Zfp13	ENSMUST00000227952	protein_coding		17	-1	23586217	692
ENSMUSG00000030007	protein_coding	Cct7	ENSMUST00000205096	retained_intron		6	1	85460738	789
ENSMUSG00000062012	protein_coding	Zfp13	ENSMUST00000228298	processed_transcript		17	-1	23586176	502
ENSMUSG00000025813	protein_coding	Homer2	ENSMUST00000207371	nonsense_mediated_decay		7	-1	81707527	1818
ENSMUSG00000030007	protein_coding	Cct7	ENSMUST00000205143	retained_intron		6	1	85461771	630
ENSMUSG00000048280	protein_coding	Zfp738	ENSMUST00000137496	protein_coding	principal1	13	-1	67683467	13215
ENSMUSG00000025813	protein_coding	Homer2	ENSMUST00000208937	protein_coding		7	-1	81692887	798
ENSMUSG00000020299	protein_coding	4930524B15Rik	ENSMUST00000102829	protein_coding	principal1	11	1	31965592	2000
ENSMUSG00000030007	protein_coding	Cct7	ENSMUST00000204612	protein_coding		6	1	85462152	235
ENSMUSG00000025813	protein_coding	Homer2	ENSMUST00000207991	processed_transcript		7	-1	81618905	478
ENSMUSG00000048280	protein_coding	Zfp738	ENSMUST00000220552	processed_transcript		13	-1	67661745	2331
ENSMUSG00000100485	protein_coding	Gm20920	ENSMUST00000187477	protein_coding	principal1	Y	1	51852120	922
ENSMUSG00000084313	processed_pseudogene	Gm13809	ENSMUST00000117921	processed_pseudogene		2	1	99555251	597
ENSMUSG00000037627	protein_coding	Rgs22	ENSMUST00000172831	protein_coding	principal1	15	-1	36140400	4006
ENSMUSG00000028860	protein_coding	Sytl1	ENSMUST00000030674	protein_coding	principal1	4	-1	133263113	1951
ENSMUSG00000106555	antisense	Gm2479	ENSMUST00000173312	antisense		5	-1	123015080	1053
ENSMUSG00000048280	protein_coding	Zfp738	ENSMUST00000175821	protein_coding		13	-1	67683516	652
ENSMUSG00000037098	protein_coding	Rab11fip3	ENSMUST00000122103	protein_coding	principal4	17	-1	26069545	5383
ENSMUSG00000029408	protein_coding	Abcb9	ENSMUST00000153433	retained_intron		5	-1	124079131	1036
ENSMUSG00000025813	protein_coding	Homer2	ENSMUST00000207039	processed_transcript		7	-1	81706786	457
ENSMUSG00000030068	protein_coding	Gm20696	ENSMUST00000155466	nonsense_mediated_decay	principal1	6	-1	99666797	3560
ENSMUSG00000048280	protein_coding	Zfp738	ENSMUST00000110973	protein_coding		13	-1	67687071	683
ENSMUSG00000092384	processed_transcript	Gm4189	ENSMUST00000174141	retained_intron		10	-1	127290724	418
ENSMUSG00000037627	protein_coding	Rgs22	ENSMUST00000173018	protein_coding		15	-1	36040679	748
ENSMUSG00000030068	protein_coding	Gm20696	ENSMUST00000176148	retained_intron		6	-1	99445607	645
ENSMUSG00000025813	protein_coding	Homer2	ENSMUST00000207289	processed_transcript		7	-1	81706925	1234
ENSMUSG00000067702	protein_coding	Tuba3a	ENSMUST00000088246	protein_coding	principal1	6	-1	125286042	1509
ENSMUSG00000106555	antisense	Gm2479	ENSMUST00000173670	antisense		5	-1	123012878	866
ENSMUSG00000037627	protein_coding	Rgs22	ENSMUST00000172737	protein_coding		15	-1	36083741	786
ENSMUSG00000103331	TEC	Gm37995	ENSMUST00000194958	TEC		6	1	40026894	1714
ENSMUSG00000037098	protein_coding	Rab11fip3	ENSMUST00000148021	protein_coding		17	-1	26018460	3333
ENSMUSG00000092384	processed_transcript	Gm4189	ENSMUST00000174167	processed_transcript		10	-1	127290788	367
ENSMUSG00000030068	protein_coding	Gm20696	ENSMUST00000176255	retained_intron		6	-1	99632376	684
ENSMUSG00000025813	protein_coding	Homer2	ENSMUST00000208107	processed_transcript		7	-1	81692929	581
ENSMUSG00000048280	protein_coding	Zfp738	ENSMUST00000125495	protein_coding		13	-1	67683551	712
ENSMUSG00000097406	antisense	Gm26833	ENSMUST00000180899	antisense		6	-1	39871971	440
ENSMUSG00000028860	protein_coding	Sytl1	ENSMUST00000142039	processed_transcript		4	-1	133263087	2484
ENSMUSG00000037627	protein_coding	Rgs22	ENSMUST00000164955	retained_intron		15	-1	36140385	1745
ENSMUSG00000083340	processed_pseudogene	Gm13156	ENSMUST00000118348	processed_pseudogene		4	1	147893673	321
ENSMUSG00000048280	protein_coding	Zfp738	ENSMUST00000175678	protein_coding		13	-1	67683514	609
ENSMUSG00000097563	sense_intronic	Gm26638	ENSMUST00000181762	sense_intronic		6	1	40118779	1924
ENSMUSG00000105311	processed_transcript	Gm44574	ENSMUST00000172729	processed_transcript		5	-1	123012874	390
ENSMUSG00000028860	protein_coding	Sytl1	ENSMUST00000154911	processed_transcript		4	-1	133263052	367
ENSMUSG00000029408	protein_coding	Abcb9	ENSMUST00000126856	nonsense_mediated_decay		5	-1	124090262	1794
ENSMUSG00000111937	processed_pseudogene	Gm46203	ENSMUST00000218130	processed_pseudogene		10	1	116631826	478
ENSMUSG00000108129	processed_transcript	4930417O13Rik	ENSMUST00000204911	antisense		6	1	125265476	3458
ENSMUSG00000102287	TEC	Gm37003	ENSMUST00000194702	TEC		6	1	40226219	2827
ENSMUSG00000048280	protein_coding	Zfp738	ENSMUST00000223721	retained_intron		13	-1	67683495	1253
ENSMUSG00000004455	protein_coding	Ppp1cc	ENSMUST00000102528	protein_coding	principal2	5	1	122158278	2384
ENSMUSG00000029408	protein_coding	Abcb9	ENSMUST00000141510	nonsense_mediated_decay		5	-1	124090262	1911
ENSMUSG00000102623	TEC	Gm37673	ENSMUST00000194880	TEC		6	1	40098722	2451
ENSMUSG00000112436	processed_pseudogene	Gm48403	ENSMUST00000218860	processed_pseudogene		10	1	116639292	135
ENSMUSG00000108129	processed_transcript	4930417O13Rik	ENSMUST00000204597	retained_intron		6	1	125265525	674
ENSMUSG00000097371	processed_pseudogene	Gm26875	ENSMUST00000181006	processed_pseudogene		13	1	67699082	950
ENSMUSG00000025813	protein_coding	Homer2	ENSMUST00000098326	protein_coding		7	-1	81692965	10982
ENSMUSG00000037098	protein_coding	Rab11fip3	ENSMUST00000120691	protein_coding	alternative2	17	-1	26069555	5249
ENSMUSG00000108129	processed_transcript	4930417O13Rik	ENSMUST00000203841	antisense		6	1	125265545	414
ENSMUSG00000029408	protein_coding	Abcb9	ENSMUST00000148392	processed_transcript		5	-1	124079820	430
ENSMUSG00000061904	protein_coding	Slc25a3	ENSMUST00000076694	protein_coding	principal2	10	-1	91124059	1612
ENSMUSG00000097484	antisense	Gm26807	ENSMUST00000181132	antisense		6	-1	40209259	4363
ENSMUSG00000026809	protein_coding	Spaca9	ENSMUST00000102877	protein_coding	principal1	2	-1	28699651	671
ENSMUSG00000109194	antisense	Gm44570	ENSMUST00000208858	antisense		7	1	81610109	470
ENSMUSG00000029408	protein_coding	Abcb9	ENSMUST00000126970	retained_intron		5	-1	124095786	2469
ENSMUSG00000108129	processed_transcript	4930417O13Rik	ENSMUST00000205000	antisense		6	1	125265619	999
ENSMUSG00000062116	protein_coding	Zfp954	ENSMUST00000056246	protein_coding	principal1	7	-1	7121488	2042
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000075069	protein_coding	principal2	9	-1	29963129	3022
ENSMUSG00000048895	protein_coding	Cdk5r1	ENSMUST00000053413	protein_coding	principal1	11	1	80477023	4162
ENSMUSG00000104818	lincRNA	Gm43661	ENSMUST00000199099	lincRNA		5	-1	124052352	687
ENSMUSG00000109194	antisense	Gm44570	ENSMUST00000207526	antisense		7	1	81610126	3698
ENSMUSG00000037098	protein_coding	Rab11fip3	ENSMUST00000144587	retained_intron		17	-1	26021818	1652
ENSMUSG00000062116	protein_coding	Zfp954	ENSMUST00000210142	retained_intron		7	-1	7121445	614
ENSMUSG00000026809	protein_coding	Spaca9	ENSMUST00000124840	protein_coding	principal1	2	-1	28699683	699
ENSMUSG00000057716	protein_coding	Tmem178b	ENSMUST00000239008	protein_coding	principal1	6	1	39871461	2495
ENSMUSG00000062245	protein_coding	Olfr170	ENSMUST00000206562	protein_coding	alternative2	16	-1	19611882	1417
ENSMUSG00000048895	protein_coding	Cdk5r1	ENSMUST00000147694	protein_coding		11	1	80477056	659
ENSMUSG00000004455	protein_coding	Ppp1cc	ENSMUST00000128309	nonsense_mediated_decay		5	1	122158356	2492
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000124119	retained_intron		9	-1	29963130	1754
ENSMUSG00000100947	unprocessed_pseudogene	Gm28949	ENSMUST00000187805	unprocessed_pseudogene		Y	-1	51940373	696
ENSMUSG00000057716	protein_coding	Tmem178b	ENSMUST00000180886	protein_coding		6	1	39873071	912
ENSMUSG00000030824	protein_coding	Nucb1	ENSMUST00000211765	protein_coding	principal3	7	-1	45510406	4853
ENSMUSG00000001225	protein_coding	Slc26a3	ENSMUST00000167432	protein_coding		12	1	31390871	942
ENSMUSG00000037098	protein_coding	Rab11fip3	ENSMUST00000126306	processed_transcript		17	-1	26069235	1976
ENSMUSG00000043090	protein_coding	Zfp866	ENSMUST00000131784	protein_coding		8	-1	69791178	2680
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000151977	processed_transcript		9	-1	29963141	852
ENSMUSG00000062245	protein_coding	Olfr170	ENSMUST00000078603	protein_coding	alternative2	16	-1	19606703	1008
ENSMUSG00000100461	lincRNA	Gm28948	ENSMUST00000188447	lincRNA		Y	-1	51981771	2167
ENSMUSG00000062245	protein_coding	Olfr170	ENSMUST00000218837	protein_coding	principal2	16	-1	19606703	1008
ENSMUSG00000102382	TEC	Gm38141	ENSMUST00000192540	TEC		10	1	120310278	317
ENSMUSG00000030824	protein_coding	Nucb1	ENSMUST00000033096	protein_coding	alternative2	7	-1	45510326	2111
ENSMUSG00000043090	protein_coding	Zfp866	ENSMUST00000137573	protein_coding	principal1	8	-1	69774911	3245
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000115237	protein_coding	alternative1	9	-1	29412204	2039
ENSMUSG00000108959	TEC	Gm44697	ENSMUST00000207756	TEC		7	1	7122160	1679
ENSMUSG00000057716	protein_coding	Tmem178b	ENSMUST00000061740	protein_coding		6	1	40110251	3178
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000152513	retained_intron		9	-1	29963130	3165
ENSMUSG00000100684	lincRNA	Gm20268	ENSMUST00000187932	lincRNA		1	1	101155809	845
ENSMUSG00000028995	protein_coding	Fam126a	ENSMUST00000101513	protein_coding		5	-1	24030312	1679
ENSMUSG00000021510	protein_coding	Zfp729a	ENSMUST00000012314	protein_coding	principal1	13	-1	67637791	9455
ENSMUSG00000026809	protein_coding	Spaca9	ENSMUST00000144209	processed_transcript		2	-1	28699727	574
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000140118	protein_coding		9	-1	29014259	580
ENSMUSG00000004455	protein_coding	Ppp1cc	ENSMUST00000086294	protein_coding	alternative1	5	1	122158356	1442
ENSMUSG00000100088	processed_pseudogene	Gm28801	ENSMUST00000188761	processed_pseudogene		1	1	101371628	449
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000155308	protein_coding		9	-1	29014259	879
ENSMUSG00000026809	protein_coding	Spaca9	ENSMUST00000145014	processed_transcript		2	-1	28699674	370
ENSMUSG00000021510	protein_coding	Zfp729a	ENSMUST00000224548	processed_transcript		13	-1	67618853	874
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000115236	protein_coding	alternative2	9	-1	29411736	1072
ENSMUSG00000021510	protein_coding	Zfp729a	ENSMUST00000225511	processed_transcript		13	-1	67618384	635
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000148606	processed_transcript		9	-1	29109782	607
ENSMUSG00000057716	protein_coding	Tmem178b	ENSMUST00000180588	retained_intron		6	1	40248901	6250
ENSMUSG00000082263	processed_pseudogene	Gm11188	ENSMUST00000122382	processed_pseudogene		11	-1	53345677	388
ENSMUSG00000061904	protein_coding	Slc25a3	ENSMUST00000163246	nonsense_mediated_decay		10	-1	91123957	1395
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000126044	processed_transcript		9	-1	29185665	826
ENSMUSG00000028995	protein_coding	Fam126a	ENSMUST00000030849	protein_coding	principal1	5	-1	24030690	5659
ENSMUSG00000021510	protein_coding	Zfp729a	ENSMUST00000225608	processed_transcript		13	-1	67627289	731
ENSMUSG00000004455	protein_coding	Ppp1cc	ENSMUST00000132555	nonsense_mediated_decay		5	1	122158356	1632
ENSMUSG00000083882	processed_pseudogene	Gm11369	ENSMUST00000120812	processed_pseudogene		13	-1	30399934	318
ENSMUSG00000059974	protein_coding	Ntm	ENSMUST00000146651	processed_transcript		9	-1	29963119	452
ENSMUSG00000029474	protein_coding	Rnf34	ENSMUST00000031434	protein_coding	principal1	5	1	122850048	4440
ENSMUSG00000112563	TEC	Gm47608	ENSMUST00000218661	TEC		10	1	52450369	2147
ENSMUSG00000004455	protein_coding	Ppp1cc	ENSMUST00000197730	protein_coding		5	1	122158593	923
ENSMUSG00000106871	lincRNA	Gm3289	ENSMUST00000200819	lincRNA		6	-1	21858178	756
ENSMUSG00000068686	protein_coding	Cd59b	ENSMUST00000111131	protein_coding		2	1	104069849	555
ENSMUSG00000112361	TEC	Gm47607	ENSMUST00000220145	TEC		10	-1	52453591	2183
ENSMUSG00000061904	protein_coding	Slc25a3	ENSMUST00000170810	protein_coding	alternative2	10	-1	91124003	1341
ENSMUSG00000068686	protein_coding	Cd59b	ENSMUST00000111132	protein_coding		2	1	104069849	436
ENSMUSG00000036502	protein_coding	Tmem255a	ENSMUST00000089056	protein_coding		X	-1	38252429	1745
ENSMUSG00000106709	antisense	Gm30270	ENSMUST00000202675	antisense		6	1	21852418	524
ENSMUSG00000112464	processed_pseudogene	Gm47609	ENSMUST00000217713	processed_pseudogene		10	-1	52514777	379
ENSMUSG00000029474	protein_coding	Rnf34	ENSMUST00000198602	protein_coding		5	1	122850157	451
ENSMUSG00000030824	protein_coding	Nucb1	ENSMUST00000210449	protein_coding	alternative2	7	-1	45503253	811
ENSMUSG00000068686	protein_coding	Cd59b	ENSMUST00000129749	protein_coding		2	1	104069891	434
ENSMUSG00000111887	processed_pseudogene	Gm47610	ENSMUST00000219750	processed_pseudogene		10	-1	52518482	190
ENSMUSG00000004455	protein_coding	Ppp1cc	ENSMUST00000135090	retained_intron		5	1	122158957	1040
ENSMUSG00000097565	protein_coding	Gm26965	ENSMUST00000167914	nonsense_mediated_decay	principal1	13	-1	67526151	1520
ENSMUSG00000085449	antisense	Gm15520	ENSMUST00000132097	antisense		9	1	29059799	1203
ENSMUSG00000030824	protein_coding	Nucb1	ENSMUST00000210394	retained_intron		7	-1	45503247	1069
ENSMUSG00000028995	protein_coding	Fam126a	ENSMUST00000197617	protein_coding		5	-1	24030648	2288
ENSMUSG00000112149	processed_pseudogene	Gm47611	ENSMUST00000219080	processed_pseudogene		10	1	52523022	3838
ENSMUSG00000029602	protein_coding	Rasal1	ENSMUST00000125804	protein_coding		5	1	120648812	400
ENSMUSG00000061904	protein_coding	Slc25a3	ENSMUST00000164505	protein_coding	principal2	10	-1	91123955	1483
ENSMUSG00000030824	protein_coding	Nucb1	ENSMUST00000210675	retained_intron		7	-1	45498838	438
ENSMUSG00000004455	protein_coding	Ppp1cc	ENSMUST00000133568	nonsense_mediated_decay		5	1	122168936	768
ENSMUSG00000028995	protein_coding	Fam126a	ENSMUST00000115109	protein_coding		5	-1	24000019	2195
ENSMUSG00000068686	protein_coding	Cd59b	ENSMUST00000090429	protein_coding	principal1	2	1	104071010	796
ENSMUSG00000030824	protein_coding	Nucb1	ENSMUST00000211682	protein_coding		7	-1	45510315	755
ENSMUSG00000028995	protein_coding	Fam126a	ENSMUST00000198867	retained_intron		5	-1	23985029	3127
ENSMUSG00000085638	sense_intronic	Gm15521	ENSMUST00000141752	sense_intronic		9	-1	29592510	835
ENSMUSG00000061904	protein_coding	Slc25a3	ENSMUST00000167455	retained_intron		10	-1	91119837	891
ENSMUSG00000004455	protein_coding	Ppp1cc	ENSMUST00000142562	retained_intron		5	1	122171649	407
ENSMUSG00000036672	protein_coding	Cenpt	ENSMUST00000212357	retained_intron		8	-1	105851992	3281
ENSMUSG00000061904	protein_coding	Slc25a3	ENSMUST00000169339	processed_transcript		10	-1	91120725	507
ENSMUSG00000030824	protein_coding	Nucb1	ENSMUST00000211343	protein_coding		7	-1	45510359	559
ENSMUSG00000061904	protein_coding	Slc25a3	ENSMUST00000171960	retained_intron		10	-1	91122223	682
ENSMUSG00000036502	protein_coding	Tmem255a	ENSMUST00000089054	protein_coding		X	-1	38252439	3311
ENSMUSG00000004455	protein_coding	Ppp1cc	ENSMUST00000151184	nonsense_mediated_decay		5	1	122171924	557
ENSMUSG00000068686	protein_coding	Cd59b	ENSMUST00000111130	protein_coding	principal1	2	1	104071066	706
ENSMUSG00000061904	protein_coding	Slc25a3	ENSMUST00000172442	retained_intron		10	-1	91124022	4039
ENSMUSG00000004455	protein_coding	Ppp1cc	ENSMUST00000134719	nonsense_mediated_decay		5	1	122172732	828
ENSMUSG00000030824	protein_coding	Nucb1	ENSMUST00000209436	protein_coding		7	-1	45510331	615
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000006061	protein_coding	principal3	5	1	3596066	4433
ENSMUSG00000105742	TEC	Gm42748	ENSMUST00000199354	TEC		5	1	122165597	2341
ENSMUSG00000108998	unprocessed_pseudogene	Olfr505-ps1	ENSMUST00000207626	unprocessed_pseudogene		7	1	108574061	976
ENSMUSG00000001225	protein_coding	Slc26a3	ENSMUST00000171616	nonsense_mediated_decay		12	1	31438217	2204
ENSMUSG00000098781	protein_coding	Gm28044	ENSMUST00000044819	nonsense_mediated_decay	principal1	13	-1	67360536	551
ENSMUSG00000028995	protein_coding	Fam126a	ENSMUST00000147179	processed_transcript		5	-1	24030305	823
ENSMUSG00000030824	protein_coding	Nucb1	ENSMUST00000209509	retained_intron		7	-1	45510389	433
ENSMUSG00000109471	processed_pseudogene	Gm19127	ENSMUST00000207067	processed_pseudogene		7	-1	108581482	2445
ENSMUSG00000098781	protein_coding	Gm28044	ENSMUST00000170543	processed_transcript		13	-1	67347873	326
ENSMUSG00000105866	processed_pseudogene	Gm6745	ENSMUST00000199216	processed_pseudogene		5	-1	24010412	526
ENSMUSG00000030824	protein_coding	Nucb1	ENSMUST00000210208	retained_intron		7	-1	45510385	2742
ENSMUSG00000084117	transcribed_unprocessed_pseudogene	Olfr1063-ps1	ENSMUST00000118807	transcribed_unprocessed_pseudogene		2	-1	86435252	942
ENSMUSG00000097104	lincRNA	Gm26579	ENSMUST00000181656	lincRNA		10	1	116674591	918
ENSMUSG00000092103	antisense	Gm17039	ENSMUST00000165145	antisense		13	1	67360671	4901
ENSMUSG00000036502	protein_coding	Tmem255a	ENSMUST00000155848	retained_intron		X	-1	38252439	3695
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000121291	protein_coding	alternative2	5	1	3596066	4555
ENSMUSG00000036502	protein_coding	Tmem255a	ENSMUST00000066498	protein_coding	principal1	X	-1	38252439	3380
ENSMUSG00000001225	protein_coding	Slc26a3	ENSMUST00000110854	nonsense_mediated_decay		12	1	31438219	1245
ENSMUSG00000109926	protein_coding	Gm45808	ENSMUST00000210701	protein_coding	principal1	7	-1	45486811	789
ENSMUSG00000111062	lincRNA	Gm47253	ENSMUST00000216890	lincRNA		10	-1	84222057	779
ENSMUSG00000098354	processed_pseudogene	Rpap3-ps2	ENSMUST00000184741	processed_pseudogene		7	-1	14228833	2161
ENSMUSG00000039492	protein_coding	Ccdc27	ENSMUST00000047207	protein_coding	principal1	4	-1	154042677	2089
ENSMUSG00000036502	protein_coding	Tmem255a	ENSMUST00000139358	processed_transcript		X	-1	38252401	599
ENSMUSG00000110878	unprocessed_pseudogene	Olfr1064-ps1	ENSMUST00000213670	unprocessed_pseudogene		2	-1	86438501	600
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000102730	protein_coding	alternative2	11	-1	54962910	2787
ENSMUSG00000111875	processed_pseudogene	Gm5425	ENSMUST00000214125	processed_pseudogene		10	1	84308886	459
ENSMUSG00000036672	protein_coding	Cenpt	ENSMUST00000212431	nonsense_mediated_decay		8	-1	105852001	1762
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000142516	protein_coding		5	1	3596199	727
ENSMUSG00000100222	processed_pseudogene	Psmb6-ps2	ENSMUST00000187074	processed_pseudogene		1	1	101385886	705
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000195894	protein_coding		5	1	3596371	528
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000211413	processed_transcript		7	1	45481877	536
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000123268	retained_intron		5	1	3604822	746
ENSMUSG00000037053	protein_coding	Azgp1	ENSMUST00000197571	nonsense_mediated_decay		5	1	137981520	1204
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000126545	protein_coding		5	1	3606202	639
ENSMUSG00000048047	protein_coding	Zbtb33	ENSMUST00000115142	protein_coding	principal1	X	1	38189812	2567
ENSMUSG00000079173	protein_coding	Zan	ENSMUST00000117564	protein_coding	principal1	5	-1	137477064	16481
ENSMUSG00000079173	protein_coding	Zan	ENSMUST00000197503	retained_intron		5	-1	137401738	3205
ENSMUSG00000070810	protein_coding	Sult2a6	ENSMUST00000184731	protein_coding		7	-1	14254870	664
ENSMUSG00000079173	protein_coding	Zan	ENSMUST00000150470	nonsense_mediated_decay		5	-1	137411581	595
ENSMUSG00000034690	protein_coding	Nlrp4c	ENSMUST00000037728	protein_coding	principal1	7	1	6045161	3615
ENSMUSG00000048047	protein_coding	Zbtb33	ENSMUST00000131124	protein_coding		X	1	38189834	2103
ENSMUSG00000037053	protein_coding	Azgp1	ENSMUST00000035390	protein_coding	principal1	5	1	137981539	1297
ENSMUSG00000050105	protein_coding	Grrp1	ENSMUST00000060050	protein_coding	principal1	4	-1	134254106	1226
ENSMUSG00000050105	protein_coding	Grrp1	ENSMUST00000138366	processed_transcript		4	-1	134253023	602
ENSMUSG00000034690	protein_coding	Nlrp4c	ENSMUST00000121583	protein_coding	principal1	7	1	6045269	3373
ENSMUSG00000037148	protein_coding	Arhgap10	ENSMUST00000076316	protein_coding	principal2	8	-1	77517953	3084
ENSMUSG00000037053	protein_coding	Azgp1	ENSMUST00000199145	retained_intron		5	1	137981568	608
ENSMUSG00000048047	protein_coding	Zbtb33	ENSMUST00000049740	protein_coding	principal1	X	1	38189793	5122
ENSMUSG00000079173	protein_coding	Zan	ENSMUST00000130056	retained_intron		5	-1	137450623	2114
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000143959	retained_intron		5	1	3609619	3491
ENSMUSG00000031491	protein_coding	Chrna6	ENSMUST00000033882	protein_coding	principal1	8	-1	27413944	2906
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000018482	protein_coding	principal3	11	-1	54962912	2810
ENSMUSG00000070810	protein_coding	Sult2a6	ENSMUST00000076576	protein_coding	principal1	7	-1	14254870	961
ENSMUSG00000116632	transcribed_processed_pseudogene	Magef1	ENSMUST00000231504	processed_transcript		16	-1	21333356	1455
ENSMUSG00000079173	protein_coding	Zan	ENSMUST00000164178	protein_coding	principal1	5	-1	137476595	16451
ENSMUSG00000116632	transcribed_processed_pseudogene	Magef1	ENSMUST00000231972	transcribed_processed_pseudogene		16	-1	21333129	484
ENSMUSG00000100065	processed_pseudogene	Gm18969	ENSMUST00000189423	processed_pseudogene		1	-1	101754543	730
ENSMUSG00000085169	antisense	Gm10785	ENSMUST00000232491	antisense		16	1	91688898	877
ENSMUSG00000034690	protein_coding	Nlrp4c	ENSMUST00000208360	protein_coding	principal1	7	1	6060507	3058
ENSMUSG00000080807	processed_pseudogene	Gm13117	ENSMUST00000120894	processed_pseudogene		4	-1	154044423	691
ENSMUSG00000071856	protein_coding	Mcc	ENSMUST00000089874	protein_coding	principal1	18	-1	44812182	7858
ENSMUSG00000037148	protein_coding	Arhgap10	ENSMUST00000210922	protein_coding	alternative2	8	-1	77517783	2208
ENSMUSG00000100355	unprocessed_pseudogene	Gm28107	ENSMUST00000191118	unprocessed_pseudogene		Y	-1	87825571	696
ENSMUSG00000100349	processed_pseudogene	Gm28188	ENSMUST00000190483	processed_pseudogene		1	-1	101880741	236
ENSMUSG00000094692	protein_coding	Olfr738	ENSMUST00000214853	protein_coding	principal1	14	1	50407568	2046
ENSMUSG00000034690	protein_coding	Nlrp4c	ENSMUST00000207267	processed_transcript		7	1	6066636	403
ENSMUSG00000085169	antisense	Gm10785	ENSMUST00000156242	antisense		16	1	91688911	1583
ENSMUSG00000037148	protein_coding	Arhgap10	ENSMUST00000210519	protein_coding		8	-1	77517783	2295
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000143132	nonsense_mediated_decay		5	1	3618898	664
ENSMUSG00000094692	protein_coding	Olfr738	ENSMUST00000214320	protein_coding	principal1	14	1	50407568	2114
ENSMUSG00000115680	lincRNA	Gm35167	ENSMUST00000227576	lincRNA		15	-1	38202217	1016
ENSMUSG00000101646	unprocessed_pseudogene	Gm28106	ENSMUST00000187640	unprocessed_pseudogene		Y	1	87907268	615
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000199035	retained_intron		5	1	3619771	987
ENSMUSG00000087190	antisense	D430001F17Rik	ENSMUST00000141344	antisense		16	1	91931237	1871
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000196124	retained_intron		5	1	3624067	403
ENSMUSG00000094692	protein_coding	Olfr738	ENSMUST00000058972	protein_coding	principal1	14	1	50413546	936
ENSMUSG00000063739	processed_pseudogene	Gm4963	ENSMUST00000072718	processed_pseudogene		5	-1	137993424	378
ENSMUSG00000109732	antisense	Gm45285	ENSMUST00000210418	antisense		8	1	77331970	749
ENSMUSG00000100699	unprocessed_pseudogene	Gm21765	ENSMUST00000189913	unprocessed_pseudogene		Y	1	38605682	696
ENSMUSG00000103886	processed_pseudogene	Gm37007	ENSMUST00000194234	processed_pseudogene		3	-1	52960366	319
ENSMUSG00000071856	protein_coding	Mcc	ENSMUST00000164666	protein_coding		18	-1	44662266	3606
ENSMUSG00000101250	unprocessed_pseudogene	Gm28105	ENSMUST00000187788	unprocessed_pseudogene		Y	-1	87949376	694
ENSMUSG00000099375	lincRNA	Gm28187	ENSMUST00000186885	lincRNA		1	-1	101895091	2134
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000196692	retained_intron		5	1	3627204	638
ENSMUSG00000108380	unprocessed_pseudogene	Olfr737-ps1	ENSMUST00000205382	unprocessed_pseudogene		14	-1	50411460	283
ENSMUSG00000043068	protein_coding	Fam89a	ENSMUST00000055257	protein_coding	principal1	8	-1	124751832	1338
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000197167	retained_intron		5	1	3635171	474
ENSMUSG00000071281	protein_coding	Zfp65	ENSMUST00000073157	protein_coding	principal1	13	-1	67729173	3957
ENSMUSG00000113057	lincRNA	Gm48812	ENSMUST00000221723	lincRNA		13	-1	62949442	664
ENSMUSG00000100543	processed_pseudogene	Gm29127	ENSMUST00000188304	processed_pseudogene		5	1	138017419	517
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000199213	retained_intron		5	1	3635615	487
ENSMUSG00000100352	lincRNA	Gm28104	ENSMUST00000188331	lincRNA		Y	-1	87958590	2168
ENSMUSG00000057903	protein_coding	Olfr739	ENSMUST00000216949	protein_coding	principal1	14	1	50418626	3581
ENSMUSG00000071856	protein_coding	Mcc	ENSMUST00000202090	retained_intron		18	-1	44519516	2680
ENSMUSG00000082073	processed_pseudogene	Gm13114	ENSMUST00000117605	processed_pseudogene		4	-1	154048128	106
ENSMUSG00000005907	protein_coding	Pex1	ENSMUST00000196432	retained_intron		5	1	3636151	668
ENSMUSG00000071856	protein_coding	Mcc	ENSMUST00000202845	retained_intron		18	-1	44662284	3729
ENSMUSG00000110666	processed_pseudogene	Gm9172	ENSMUST00000212092	processed_pseudogene		8	1	124765261	954
ENSMUSG00000084190	processed_pseudogene	Gm11869	ENSMUST00000118701	processed_pseudogene		4	-1	15969928	329
ENSMUSG00000071856	protein_coding	Mcc	ENSMUST00000201270	processed_transcript		18	-1	44724658	504
ENSMUSG00000057903	protein_coding	Olfr739	ENSMUST00000075261	protein_coding	principal1	14	1	50424521	930
ENSMUSG00000108058	polymorphic_pseudogene	Olfr451-ps1	ENSMUST00000205127	polymorphic_pseudogene	principal1	6	1	42800743	936
ENSMUSG00000071281	protein_coding	Zfp65	ENSMUST00000130891	protein_coding		13	-1	67724326	1103
ENSMUSG00000021540	protein_coding	Smad5	ENSMUST00000069557	protein_coding	principal1	13	1	56703010	6584
ENSMUSG00000054431	protein_coding	Olfr450	ENSMUST00000218832	protein_coding	principal1	6	1	42811939	1899
ENSMUSG00000063800	protein_coding	Prpf38a	ENSMUST00000132951	processed_transcript		4	-1	108567027	2219
ENSMUSG00000071281	protein_coding	Zfp65	ENSMUST00000223829	protein_coding		13	-1	67724294	749
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000235812	processed_transcript		18	1	38284537	548
ENSMUSG00000054431	protein_coding	Olfr450	ENSMUST00000067503	protein_coding	principal1	6	1	42817473	933
ENSMUSG00000036672	protein_coding	Cenpt	ENSMUST00000040776	protein_coding	principal1	8	-1	105852054	1814
ENSMUSG00000071281	protein_coding	Zfp65	ENSMUST00000127979	protein_coding		13	-1	67724272	733
ENSMUSG00000029669	protein_coding	Tspan12	ENSMUST00000120965	protein_coding		6	-1	21852088	2157
ENSMUSG00000114264	antisense	Gm48095	ENSMUST00000225507	antisense		13	1	67658669	532
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000108886	protein_coding	alternative2	11	-1	54962916	2642
ENSMUSG00000111306	protein_coding	Olfr1065	ENSMUST00000216162	protein_coding	principal1	2	-1	86450590	2148
ENSMUSG00000036672	protein_coding	Cenpt	ENSMUST00000212803	retained_intron		8	-1	105846700	562
ENSMUSG00000028394	protein_coding	Pole3	ENSMUST00000030091	protein_coding	principal1	4	-1	62525068	1805
ENSMUSG00000021540	protein_coding	Smad5	ENSMUST00000138677	retained_intron		13	1	56703039	1398
ENSMUSG00000036672	protein_coding	Cenpt	ENSMUST00000212625	retained_intron		8	-1	105851995	853
ENSMUSG00000028394	protein_coding	Pole3	ENSMUST00000128100	nonsense_mediated_decay		4	-1	62525068	1945
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000102731	protein_coding	principal3	11	-1	54962917	2973
ENSMUSG00000056290	protein_coding	Ms4a4b	ENSMUST00000136366	retained_intron		19	1	11443553	786
ENSMUSG00000029669	protein_coding	Tspan12	ENSMUST00000031678	protein_coding	principal1	6	-1	21852515	2490
ENSMUSG00000111306	protein_coding	Olfr1065	ENSMUST00000217586	protein_coding	principal1	2	-1	86450591	2174
ENSMUSG00000028394	protein_coding	Pole3	ENSMUST00000129930	retained_intron		4	-1	62525038	391
ENSMUSG00000056290	protein_coding	Ms4a4b	ENSMUST00000145160	retained_intron		19	1	11443553	798
ENSMUSG00000112791	processed_pseudogene	Gm47612	ENSMUST00000218112	processed_pseudogene		10	1	52528519	505
ENSMUSG00000111306	protein_coding	Olfr1065	ENSMUST00000213789	protein_coding	principal1	2	-1	86450591	2154
ENSMUSG00000029669	protein_coding	Tspan12	ENSMUST00000123116	protein_coding		6	-1	21851981	727
ENSMUSG00000056290	protein_coding	Ms4a4b	ENSMUST00000142135	retained_intron		19	1	11443558	3789
ENSMUSG00000036672	protein_coding	Cenpt	ENSMUST00000212873	retained_intron		8	-1	105851969	807
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000108885	protein_coding	alternative2	11	-1	54962909	2686
ENSMUSG00000111306	protein_coding	Olfr1065	ENSMUST00000216165	protein_coding	principal1	2	-1	86446004	992
ENSMUSG00000049576	transcribed_processed_pseudogene	Zfa-ps	ENSMUST00000180673	processed_transcript		10	-1	52545739	3420
ENSMUSG00000021540	protein_coding	Smad5	ENSMUST00000109876	protein_coding	principal1	13	1	56703052	4570
ENSMUSG00000029669	protein_coding	Tspan12	ENSMUST00000134635	protein_coding		6	-1	21851914	556
ENSMUSG00000008307	protein_coding	1700109H08Rik	ENSMUST00000147801	nonsense_mediated_decay		5	1	3571566	817
ENSMUSG00000049576	transcribed_processed_pseudogene	Zfa-ps	ENSMUST00000180526	transcribed_processed_pseudogene		10	-1	52545238	2231
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000034326	protein_coding	principal1	8	1	69791163	3915
ENSMUSG00000036672	protein_coding	Cenpt	ENSMUST00000212204	retained_intron		8	-1	105851981	864
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000132224	retained_intron		11	-1	54921075	442
ENSMUSG00000110712	antisense	Gm39662	ENSMUST00000212057	antisense		1	1	72641188	1238
ENSMUSG00000034764	antisense	1700006J14Rik	ENSMUST00000041178	antisense		10	1	120364157	1082
ENSMUSG00000110712	antisense	Gm39662	ENSMUST00000211909	antisense		1	1	72641243	1227
ENSMUSG00000113010	lincRNA	Gm34084	ENSMUST00000222236	lincRNA		13	-1	44504548	1298
ENSMUSG00000110550	processed_pseudogene	Gm45856	ENSMUST00000212752	processed_pseudogene		8	1	124781733	416
ENSMUSG00000036672	protein_coding	Cenpt	ENSMUST00000212839	nonsense_mediated_decay		8	-1	105851986	567
ENSMUSG00000021540	protein_coding	Smad5	ENSMUST00000132302	processed_transcript		13	1	56703066	1385
ENSMUSG00000029669	protein_coding	Tspan12	ENSMUST00000143531	protein_coding		6	-1	21852169	334
ENSMUSG00000036672	protein_coding	Cenpt	ENSMUST00000212797	processed_transcript		8	-1	105853278	579
ENSMUSG00000029669	protein_coding	Tspan12	ENSMUST00000202353	protein_coding		6	-1	21851828	824
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000126703	protein_coding		11	-1	54956122	941
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000155316	protein_coding		11	-1	54956047	878
ENSMUSG00000036672	protein_coding	Cenpt	ENSMUST00000212552	nonsense_mediated_decay		8	-1	105852008	348
ENSMUSG00000021540	protein_coding	Smad5	ENSMUST00000109874	protein_coding	principal1	13	1	56703668	4534
ENSMUSG00000100248	lincRNA	Gm28950	ENSMUST00000188826	lincRNA		Y	1	52013770	1500
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000151736	processed_transcript		11	-1	54956087	391
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000132776	processed_transcript		11	-1	54962909	347
ENSMUSG00000034764	antisense	1700006J14Rik	ENSMUST00000160091	antisense		10	1	120364158	2629
ENSMUSG00000083115	processed_pseudogene	Gm13386	ENSMUST00000117677	processed_pseudogene		2	-1	28807831	124
ENSMUSG00000040354	protein_coding	Mars1	ENSMUST00000037290	protein_coding	principal3	10	-1	127311786	2939
ENSMUSG00000030888	protein_coding	Rrp8	ENSMUST00000033179	protein_coding	principal3	7	-1	105736781	3053
ENSMUSG00000034764	antisense	1700006J14Rik	ENSMUST00000159621	antisense		10	1	120364170	552
ENSMUSG00000020400	protein_coding	Tnip1	ENSMUST00000108889	protein_coding	principal3	11	-1	54956122	2834
ENSMUSG00000021540	protein_coding	Smad5	ENSMUST00000136702	processed_transcript		13	1	56733017	572
ENSMUSG00000100248	lincRNA	Gm28950	ENSMUST00000185250	lincRNA		Y	1	52014223	434
ENSMUSG00000100248	lincRNA	Gm28950	ENSMUST00000185765	lincRNA		Y	1	52014223	618
ENSMUSG00000008307	protein_coding	1700109H08Rik	ENSMUST00000008451	protein_coding	principal1	5	1	3571673	773
ENSMUSG00000034764	antisense	1700006J14Rik	ENSMUST00000161511	antisense		10	1	120364213	574
ENSMUSG00000082180	processed_pseudogene	Gm12230	ENSMUST00000118301	processed_pseudogene		11	1	54947435	454
ENSMUSG00000030888	protein_coding	Rrp8	ENSMUST00000098148	protein_coding	alternative2	7	-1	105737385	2216
ENSMUSG00000110360	processed_pseudogene	Gm45380	ENSMUST00000210465	processed_pseudogene		7	1	101790536	315
ENSMUSG00000053399	protein_coding	Adamts18	ENSMUST00000093113	protein_coding	principal1	8	-1	113848615	5642
ENSMUSG00000090191	antisense	9230105E05Rik	ENSMUST00000161291	antisense		10	1	120389523	2250
ENSMUSG00000008307	protein_coding	1700109H08Rik	ENSMUST00000125740	protein_coding		5	1	3575688	313
ENSMUSG00000101623	unprocessed_pseudogene	Gm21245	ENSMUST00000190467	unprocessed_pseudogene		Y	-1	52262626	696
ENSMUSG00000113718	processed_pseudogene	Gm2645	ENSMUST00000223516	processed_pseudogene		13	-1	50208088	547
ENSMUSG00000008307	protein_coding	1700109H08Rik	ENSMUST00000198134	retained_intron		5	1	3578223	2227
ENSMUSG00000030888	protein_coding	Rrp8	ENSMUST00000148176	retained_intron		7	-1	105733681	834
ENSMUSG00000035530	protein_coding	Eif1	ENSMUST00000049385	protein_coding	principal1	11	1	100319885	1322
ENSMUSG00000100996	unprocessed_pseudogene	Gm29169	ENSMUST00000189835	unprocessed_pseudogene		Y	-1	52292140	615
ENSMUSG00000040354	protein_coding	Mars1	ENSMUST00000134778	protein_coding		10	-1	127297764	621
ENSMUSG00000001225	protein_coding	Slc26a3	ENSMUST00000001254	protein_coding	principal1	12	1	31438219	2908
ENSMUSG00000008307	protein_coding	1700109H08Rik	ENSMUST00000156973	nonsense_mediated_decay		5	1	3580498	235
ENSMUSG00000083489	unprocessed_pseudogene	Gm11784	ENSMUST00000118568	unprocessed_pseudogene		4	1	3386846	474
ENSMUSG00000035530	protein_coding	Eif1	ENSMUST00000151513	protein_coding		11	1	100320209	503
ENSMUSG00000056290	protein_coding	Ms4a4b	ENSMUST00000035258	protein_coding	principal1	19	1	11443573	4750
ENSMUSG00000081711	processed_pseudogene	Gm11785	ENSMUST00000120165	processed_pseudogene		4	1	3455702	601
ENSMUSG00000030888	protein_coding	Rrp8	ENSMUST00000154852	retained_intron		7	-1	105733946	521
ENSMUSG00000001225	protein_coding	Slc26a3	ENSMUST00000168209	retained_intron		12	1	31438233	1307
ENSMUSG00000030888	protein_coding	Rrp8	ENSMUST00000127738	nonsense_mediated_decay		7	-1	105734063	545
ENSMUSG00000035530	protein_coding	Eif1	ENSMUST00000139846	processed_transcript		11	1	100320518	447
ENSMUSG00000074170	protein_coding	Plekhf1	ENSMUST00000098513	protein_coding	principal1	7	-1	38228016	5263
ENSMUSG00000001225	protein_coding	Slc26a3	ENSMUST00000165816	retained_intron		12	1	31447435	3462
ENSMUSG00000035530	protein_coding	Eif1	ENSMUST00000152521	protein_coding		11	1	100320708	924
ENSMUSG00000030888	protein_coding	Rrp8	ENSMUST00000137902	processed_transcript		7	-1	105736373	411
ENSMUSG00000001225	protein_coding	Slc26a3	ENSMUST00000109275	retained_intron		12	1	31470872	847
ENSMUSG00000056290	protein_coding	Ms4a4b	ENSMUST00000152242	retained_intron		19	1	11461139	550
ENSMUSG00000091040	processed_pseudogene	Gm9359	ENSMUST00000163721	processed_pseudogene		12	1	31418848	1221
ENSMUSG00000035530	protein_coding	Eif1	ENSMUST00000132618	processed_transcript		11	1	100320884	383
ENSMUSG00000056290	protein_coding	Ms4a4b	ENSMUST00000144135	nonsense_mediated_decay		19	1	11461257	578
ENSMUSG00000108483	lincRNA	Gm45184	ENSMUST00000206354	lincRNA		7	1	127434422	955
ENSMUSG00000056290	protein_coding	Ms4a4b	ENSMUST00000123758	retained_intron		19	1	11462489	630
ENSMUSG00000117810	processed_pseudogene	Gm8934	ENSMUST00000236578	processed_pseudogene		18	-1	70648037	889
ENSMUSG00000100968	unprocessed_pseudogene	Gm2098	ENSMUST00000189146	unprocessed_pseudogene		Y	-1	695777	1763
ENSMUSG00000029392	protein_coding	Rilpl1	ENSMUST00000062153	protein_coding	principal1	5	-1	124531391	2249
ENSMUSG00000118309	lincRNA	Gm50261	ENSMUST00000237754	lincRNA		18	-1	70706497	1165
ENSMUSG00000118036	processed_pseudogene	Gm6386	ENSMUST00000236487	processed_pseudogene		19	1	7975840	2200
ENSMUSG00000117735	processed_pseudogene	Gm18963	ENSMUST00000236362	processed_pseudogene		18	1	70769462	616
ENSMUSG00000118435	unitary_pseudogene	Gm50482	ENSMUST00000238745	unitary_pseudogene		5	1	32695749	515
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000137214	retained_intron		7	1	101663633	1170
ENSMUSG00000041126	protein_coding	H2az2	ENSMUST00000109737	protein_coding	principal1	11	-1	6444443	1633
ENSMUSG00000106680	TEC	Gm43852	ENSMUST00000202098	TEC		5	-1	32713988	917
ENSMUSG00000041126	protein_coding	H2az2	ENSMUST00000093346	protein_coding		11	-1	6444352	519
ENSMUSG00000029392	protein_coding	Rilpl1	ENSMUST00000200202	nonsense_mediated_decay		5	-1	124503971	682
ENSMUSG00000029602	protein_coding	Rasal1	ENSMUST00000031606	protein_coding	principal1	5	1	120648822	3212
ENSMUSG00000049168	protein_coding	Olfr449	ENSMUST00000204229	protein_coding		6	1	42834384	593
ENSMUSG00000040354	protein_coding	Mars1	ENSMUST00000145275	retained_intron		10	-1	127311678	3065
ENSMUSG00000063535	protein_coding	Zfp773	ENSMUST00000211240	protein_coding		7	-1	7136724	4073
ENSMUSG00000029392	protein_coding	Rilpl1	ENSMUST00000199766	protein_coding		5	-1	124514659	630
ENSMUSG00000100682	lincRNA	Gm28103	ENSMUST00000188392	lincRNA		Y	-1	87994644	416
ENSMUSG00000074300	protein_coding	Smim31	ENSMUST00000098713	protein_coding	principal1	8	-1	65129563	1507
ENSMUSG00000028224	protein_coding	Nbn	ENSMUST00000029879	protein_coding	principal1	4	1	15957925	2533
ENSMUSG00000098506	processed_pseudogene	Phf20-ps	ENSMUST00000185066	processed_pseudogene		7	1	14304780	2886
ENSMUSG00000109711	processed_pseudogene	Gm45445	ENSMUST00000209586	processed_pseudogene		8	-1	65092546	232
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000004681	protein_coding	principal1	8	1	3515384	4438
ENSMUSG00000028224	protein_coding	Nbn	ENSMUST00000149069	protein_coding		4	1	15957967	1752
ENSMUSG00000029392	protein_coding	Rilpl1	ENSMUST00000199125	protein_coding		5	-1	124514743	766
ENSMUSG00000040354	protein_coding	Mars1	ENSMUST00000139683	retained_intron		10	-1	127297675	467
ENSMUSG00000029602	protein_coding	Rasal1	ENSMUST00000156722	protein_coding	principal1	5	1	120649188	3251
ENSMUSG00000063800	protein_coding	Prpf38a	ENSMUST00000079213	protein_coding	principal1	4	-1	108579336	1516
ENSMUSG00000109620	processed_pseudogene	Gm48810	ENSMUST00000211412	processed_pseudogene		8	-1	65094043	454
ENSMUSG00000040354	protein_coding	Mars1	ENSMUST00000128369	retained_intron		10	-1	127308973	574
ENSMUSG00000049168	protein_coding	Olfr449	ENSMUST00000214687	protein_coding	principal1	6	1	42834384	1921
ENSMUSG00000099216	protein_coding	Obox8	ENSMUST00000184356	protein_coding	principal1	7	-1	14333557	1167
ENSMUSG00000056758	protein_coding	Hmga2	ENSMUST00000072777	protein_coding	principal1	10	-1	120476469	3710
ENSMUSG00000043866	protein_coding	Taf10	ENSMUST00000141116	protein_coding	principal1	7	-1	105744361	4281
ENSMUSG00000106662	TEC	Gm43034	ENSMUST00000198678	TEC		5	1	124531133	1364
ENSMUSG00000040354	protein_coding	Mars1	ENSMUST00000171564	protein_coding	alternative2	10	-1	127311786	2962
ENSMUSG00000049168	protein_coding	Olfr449	ENSMUST00000204072	protein_coding	principal1	6	1	42834428	1974
ENSMUSG00000106026	lincRNA	Gm43131	ENSMUST00000200042	lincRNA		5	-1	11916836	969
ENSMUSG00000026807	protein_coding	Ak8	ENSMUST00000074156	protein_coding	principal1	2	1	28700164	1567
ENSMUSG00000096438	processed_pseudogene	Gapdh-ps15	ENSMUST00000180966	processed_pseudogene		Y	1	38619783	1002
ENSMUSG00000056758	protein_coding	Hmga2	ENSMUST00000159699	protein_coding		10	-1	120476469	3810
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000125583	retained_intron		11	1	119602905	2569
ENSMUSG00000029602	protein_coding	Rasal1	ENSMUST00000148695	processed_transcript		5	1	120653367	465
ENSMUSG00000069206	protein_coding	Zfp874a	ENSMUST00000057241	protein_coding		13	-1	67451585	2210
ENSMUSG00000049168	protein_coding	Olfr449	ENSMUST00000050729	protein_coding	principal1	6	1	42837852	1037
ENSMUSG00000063800	protein_coding	Prpf38a	ENSMUST00000125106	processed_transcript		4	-1	108573216	2889
ENSMUSG00000056758	protein_coding	Hmga2	ENSMUST00000159310	retained_intron		10	-1	120476292	3389
ENSMUSG00000058244	protein_coding	Olfr506	ENSMUST00000209296	protein_coding	principal1	7	1	108610787	3228
ENSMUSG00000029602	protein_coding	Rasal1	ENSMUST00000154759	retained_intron		5	1	120678593	486
ENSMUSG00000069806	protein_coding	Cacng7	ENSMUST00000092891	protein_coding	principal1	7	1	3332955	2212
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000130049	retained_intron		11	1	119602995	3384
ENSMUSG00000099770	unprocessed_pseudogene	Gm28623	ENSMUST00000187219	unprocessed_pseudogene		1	1	102161367	192
ENSMUSG00000063535	protein_coding	Zfp773	ENSMUST00000032622	protein_coding	principal1	7	-1	7136755	3028
ENSMUSG00000109793	processed_pseudogene	Gm10043	ENSMUST00000210691	processed_pseudogene		8	-1	22958441	235
ENSMUSG00000043866	protein_coding	Taf10	ENSMUST00000131683	retained_intron		7	-1	105744082	601
ENSMUSG00000058244	protein_coding	Olfr506	ENSMUST00000077343	protein_coding	principal1	7	1	108612280	1008
ENSMUSG00000026807	protein_coding	Ak8	ENSMUST00000123794	processed_transcript		2	1	28700207	680
ENSMUSG00000053399	protein_coding	Adamts18	ENSMUST00000212665	nonsense_mediated_decay		8	-1	113844878	4591
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000208310	protein_coding		8	1	3515391	221
ENSMUSG00000069806	protein_coding	Cacng7	ENSMUST00000203497	retained_intron		7	1	3338216	812
ENSMUSG00000043866	protein_coding	Taf10	ENSMUST00000146999	retained_intron		7	-1	105743610	456
ENSMUSG00000026807	protein_coding	Ak8	ENSMUST00000137588	processed_transcript		2	1	28742250	397
ENSMUSG00000069206	protein_coding	Zfp874a	ENSMUST00000225778	protein_coding		13	-1	67449478	794
ENSMUSG00000107620	TEC	Gm44256	ENSMUST00000203304	TEC		7	1	3337545	335
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000238453	retained_intron		8	1	69791250	4211
ENSMUSG00000101515	unprocessed_pseudogene	Gm21899	ENSMUST00000190745	unprocessed_pseudogene		Y	-1	52329030	696
ENSMUSG00000069206	protein_coding	Zfp874a	ENSMUST00000225389	processed_transcript		13	-1	67431564	284
ENSMUSG00000082796	processed_pseudogene	Gm13385	ENSMUST00000121089	processed_pseudogene		2	-1	28793569	220
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000238491	retained_intron		8	1	69791271	4746
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000147772	retained_intron		11	1	119603015	3662
ENSMUSG00000069206	protein_coding	Zfp874a	ENSMUST00000224239	retained_intron		13	-1	67450294	4040
ENSMUSG00000113920	processed_pseudogene	Gm18783	ENSMUST00000220465	processed_pseudogene		13	-1	3125459	1151
ENSMUSG00000043866	protein_coding	Taf10	ENSMUST00000054556	retained_intron		7	-1	105744342	678
ENSMUSG00000061000	protein_coding	Olfr507	ENSMUST00000080014	protein_coding	principal1	7	1	108621814	951
ENSMUSG00000101915	protein_coding	Gm28102	ENSMUST00000187146	protein_coding	principal1	Y	1	88053315	924
ENSMUSG00000099559	lincRNA	Gm29063	ENSMUST00000190236	lincRNA		Y	1	52342720	2166
ENSMUSG00000112552	lincRNA	Gm36065	ENSMUST00000217856	lincRNA		10	1	52594012	608
ENSMUSG00000031893	protein_coding	Tsnaxip1	ENSMUST00000212566	protein_coding	alternative2	8	1	105827731	1993
ENSMUSG00000067848	protein_coding	4933402N22Rik	ENSMUST00000168329	protein_coding		5	1	11918043	1125
ENSMUSG00000112552	lincRNA	Gm36065	ENSMUST00000219654	lincRNA		10	1	52594016	1424
ENSMUSG00000110339	unprocessed_pseudogene	Vmn2r-ps35	ENSMUST00000169206	unprocessed_pseudogene		7	-1	7154517	831
ENSMUSG00000079988	processed_pseudogene	Gm11970	ENSMUST00000116105	processed_pseudogene		11	1	6446218	320
ENSMUSG00000069206	protein_coding	Zfp874a	ENSMUST00000180580	nonsense_mediated_decay		13	-1	67451580	3308
ENSMUSG00000099637	unprocessed_pseudogene	Gm28737	ENSMUST00000186808	unprocessed_pseudogene		Y	1	52347472	315
ENSMUSG00000067848	protein_coding	4933402N22Rik	ENSMUST00000170301	protein_coding	principal1	5	1	11918043	1092
ENSMUSG00000098782	processed_pseudogene	Mrps36-ps3	ENSMUST00000183899	processed_pseudogene		7	-1	14342330	305
ENSMUSG00000053399	protein_coding	Adamts18	ENSMUST00000212437	nonsense_mediated_decay		8	-1	113844969	3307
ENSMUSG00000113492	lincRNA	Gm47792	ENSMUST00000222493	lincRNA		13	1	44509558	911
ENSMUSG00000113977	lincRNA	Gm34276	ENSMUST00000222558	lincRNA		13	-1	44568668	439
ENSMUSG00000083693	processed_pseudogene	Gm11971	ENSMUST00000117715	processed_pseudogene		11	1	6453151	288
ENSMUSG00000105171	processed_pseudogene	Gm5288	ENSMUST00000198323	processed_pseudogene		5	1	11927622	1119
ENSMUSG00000107673	unprocessed_pseudogene	Crs-ps	ENSMUST00000203723	unprocessed_pseudogene		7	-1	14370207	760
ENSMUSG00000053399	protein_coding	Adamts18	ENSMUST00000213076	processed_transcript		8	-1	113775011	693
ENSMUSG00000100746	unprocessed_pseudogene	Gm28716	ENSMUST00000190217	unprocessed_pseudogene		Y	-1	88141103	696
ENSMUSG00000063764	protein_coding	Olfr508	ENSMUST00000072914	protein_coding	principal1	7	1	108629994	1635
ENSMUSG00000099516	lincRNA	Gm29066	ENSMUST00000188502	lincRNA		5	1	12089537	452
ENSMUSG00000106118	processed_pseudogene	Gm18038	ENSMUST00000197900	processed_pseudogene		5	1	24085244	485
ENSMUSG00000103740	TEC	Gm38242	ENSMUST00000192354	TEC		5	-1	12099441	430
ENSMUSG00000099675	processed_pseudogene	Gm28717	ENSMUST00000189950	processed_pseudogene		Y	-1	88177597	315
ENSMUSG00000105155	TEC	Gm42910	ENSMUST00000198917	TEC		5	-1	12144961	2921
ENSMUSG00000084280	processed_pseudogene	Gm11972	ENSMUST00000118514	processed_pseudogene		11	-1	6455905	389
ENSMUSG00000099351	unprocessed_pseudogene	Gm28776	ENSMUST00000191282	unprocessed_pseudogene		Y	1	38643836	615
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000238710	retained_intron		8	1	69796953	644
ENSMUSG00000028587	protein_coding	Orc1	ENSMUST00000139772	processed_transcript		4	1	108579423	443
ENSMUSG00000101770	lincRNA	Gm28718	ENSMUST00000188417	lincRNA		Y	-1	88182351	2168
ENSMUSG00000053399	protein_coding	Adamts18	ENSMUST00000213061	retained_intron		8	-1	113848738	3397
ENSMUSG00000069206	protein_coding	Zfp874a	ENSMUST00000075255	protein_coding	principal1	13	-1	67451624	3238
ENSMUSG00000028587	protein_coding	Orc1	ENSMUST00000130162	processed_transcript		4	1	108579434	679
ENSMUSG00000053399	protein_coding	Adamts18	ENSMUST00000213078	retained_intron		8	-1	113845304	3524
ENSMUSG00000099489	unprocessed_pseudogene	Gm21787	ENSMUST00000189993	unprocessed_pseudogene		Y	1	38673331	693
ENSMUSG00000031893	protein_coding	Tsnaxip1	ENSMUST00000034365	protein_coding	principal2	8	1	105827744	2210
ENSMUSG00000047735	protein_coding	Samd9l	ENSMUST00000120087	protein_coding	principal1	6	-1	3399572	5330
ENSMUSG00000049280	protein_coding	Olfr509	ENSMUST00000213756	protein_coding	principal1	7	-1	108651906	3547
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000238217	retained_intron		8	1	69796970	943
ENSMUSG00000053399	protein_coding	Adamts18	ENSMUST00000212527	processed_transcript		8	-1	113845301	637
ENSMUSG00000049280	protein_coding	Olfr509	ENSMUST00000215075	protein_coding	principal1	7	-1	108651906	3418
ENSMUSG00000079156	protein_coding	Smok3b	ENSMUST00000100537	protein_coding	principal1	5	1	138037224	2333
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000208006	retained_intron		8	1	3515393	2891
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000238353	retained_intron		8	1	69797089	886
ENSMUSG00000025408	protein_coding	Ddit3	ENSMUST00000026475	protein_coding	principal1	10	1	127290774	890
ENSMUSG00000049280	protein_coding	Olfr509	ENSMUST00000214861	protein_coding	principal1	7	-1	108651906	3535
ENSMUSG00000031893	protein_coding	Tsnaxip1	ENSMUST00000211949	processed_transcript		8	1	105827752	315
ENSMUSG00000069206	protein_coding	Zfp874a	ENSMUST00000225479	protein_coding		13	-1	67451583	1092
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000207146	protein_coding		8	1	3515411	417
ENSMUSG00000047735	protein_coding	Samd9l	ENSMUST00000201638	protein_coding		6	-1	3385006	429
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000238442	retained_intron		8	1	69798396	2776
ENSMUSG00000069206	protein_coding	Zfp874a	ENSMUST00000223682	nonsense_mediated_decay		13	-1	67451602	483
ENSMUSG00000079156	protein_coding	Smok3b	ENSMUST00000166206	protein_coding	principal1	5	1	138021429	2160
ENSMUSG00000049280	protein_coding	Olfr509	ENSMUST00000061690	protein_coding	principal1	7	-1	108646658	1075
ENSMUSG00000027162	protein_coding	Lin7c	ENSMUST00000028583	protein_coding	principal1	2	1	109890853	4228
ENSMUSG00000113560	processed_pseudogene	Gm48519	ENSMUST00000221160	processed_pseudogene		13	-1	3135145	497
ENSMUSG00000060480	protein_coding	Olfr171	ENSMUST00000205467	protein_coding	alternative1	16	-1	19629916	1406
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000208002	protein_coding		8	1	3515425	4444
ENSMUSG00000025408	protein_coding	Ddit3	ENSMUST00000139091	protein_coding		10	1	127290793	600
ENSMUSG00000069206	protein_coding	Zfp874a	ENSMUST00000225414	retained_intron		13	-1	67451611	733
ENSMUSG00000113651	processed_pseudogene	Gm4900	ENSMUST00000222046	processed_pseudogene		13	-1	3140112	1628
ENSMUSG00000060480	protein_coding	Olfr171	ENSMUST00000079891	protein_coding	principal2	16	-1	19625101	945
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000238316	nonsense_mediated_decay		8	1	69798890	838
ENSMUSG00000112973	processed_pseudogene	Gm48520	ENSMUST00000223427	processed_pseudogene		13	-1	3141503	148
ENSMUSG00000025408	protein_coding	Ddit3	ENSMUST00000134686	retained_intron		10	1	127290794	969
ENSMUSG00000116429	protein_coding	Ddit3	ENSMUST00000230446	protein_coding	principal1	10	1	127290829	105
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000208762	protein_coding		8	1	3515637	544
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000238646	retained_intron		8	1	69799411	587
ENSMUSG00000075599	protein_coding	Smok3a	ENSMUST00000171498	protein_coding	principal1	5	1	138021261	2327
ENSMUSG00000107815	lincRNA	Gm44257	ENSMUST00000204469	lincRNA		7	-1	3390080	1446
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000238648	retained_intron		8	1	69805304	707
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000207424	protein_coding		8	1	3516661	665
ENSMUSG00000031862	protein_coding	Atp13a1	ENSMUST00000238550	retained_intron		8	1	69806281	730
ENSMUSG00000081660	unprocessed_pseudogene	Gm11787	ENSMUST00000121996	unprocessed_pseudogene		4	-1	3516515	1050
ENSMUSG00000027162	protein_coding	Lin7c	ENSMUST00000151163	retained_intron		2	1	109890870	746
ENSMUSG00000002477	protein_coding	Snrpd1	ENSMUST00000002551	protein_coding	principal1	18	1	10617775	858
ENSMUSG00000092544	protein_coding	Gm20422	ENSMUST00000149782	protein_coding		8	-1	69774886	956
ENSMUSG00000092544	protein_coding	Gm20422	ENSMUST00000126915	protein_coding	principal1	8	-1	69766679	653
ENSMUSG00000075599	protein_coding	Smok3a	ENSMUST00000085886	protein_coding	principal1	5	1	138021276	2723
ENSMUSG00000095432	protein_coding	Zfp748	ENSMUST00000181892	protein_coding	principal1	13	-1	67553830	5293
ENSMUSG00000092260	protein_coding	Zfp963	ENSMUST00000130458	protein_coding	principal1	8	-1	69749962	2291
ENSMUSG00000091304	transcribed_unprocessed_pseudogene	Speer6-ps1	ENSMUST00000223482	processed_transcript		13	1	3149475	979
ENSMUSG00000091304	transcribed_unprocessed_pseudogene	Speer6-ps1	ENSMUST00000222775	processed_transcript		13	1	3169994	1501
ENSMUSG00000071818	antisense	4930417O22Rik	ENSMUST00000123249	antisense		11	1	101952421	1184
ENSMUSG00000091304	transcribed_unprocessed_pseudogene	Speer6-ps1	ENSMUST00000168736	transcribed_unprocessed_pseudogene		13	1	3186206	545
ENSMUSG00000092260	protein_coding	Zfp963	ENSMUST00000154063	protein_coding		8	-1	69749970	640
ENSMUSG00000108437	processed_pseudogene	Gm19366	ENSMUST00000206996	processed_pseudogene		7	-1	128013184	156
ENSMUSG00000002477	protein_coding	Snrpd1	ENSMUST00000234207	protein_coding		18	1	10617796	439
ENSMUSG00000061923	protein_coding	Odf1	ENSMUST00000081966	protein_coding	principal1	15	1	38219203	1105
ENSMUSG00000002477	protein_coding	Snrpd1	ENSMUST00000234728	retained_intron		18	1	10617865	439
ENSMUSG00000020788	protein_coding	Atp2a3	ENSMUST00000108486	protein_coding		11	1	72961169	4540
ENSMUSG00000002477	protein_coding	Snrpd1	ENSMUST00000235020	protein_coding		18	1	10617869	670
ENSMUSG00000107862	antisense	Gm44151	ENSMUST00000204704	antisense		7	-1	3400926	259
ENSMUSG00000002477	protein_coding	Snrpd1	ENSMUST00000234077	processed_transcript		18	1	10633960	578
ENSMUSG00000099565	unprocessed_pseudogene	Gm28738	ENSMUST00000187480	unprocessed_pseudogene		Y	1	52383999	696
ENSMUSG00000045045	protein_coding	Lrfn4	ENSMUST00000113822	protein_coding	principal1	19	-1	4615667	2918
ENSMUSG00000075598	protein_coding	Smok3c	ENSMUST00000110967	protein_coding	principal1	5	1	138053194	2330
ENSMUSG00000020788	protein_coding	Atp2a3	ENSMUST00000108484	protein_coding		11	1	72961169	4467
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000208851	retained_intron		8	1	3516863	5743
ENSMUSG00000020788	protein_coding	Atp2a3	ENSMUST00000149493	retained_intron		11	1	72961290	347
ENSMUSG00000100343	unprocessed_pseudogene	Gm20923	ENSMUST00000190009	unprocessed_pseudogene		Y	-1	52470686	319
ENSMUSG00000075598	protein_coding	Smok3c	ENSMUST00000178402	protein_coding	principal1	5	1	138064253	1515
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000207941	protein_coding		8	1	3516874	4263
ENSMUSG00000045045	protein_coding	Lrfn4	ENSMUST00000053597	protein_coding	principal1	19	-1	4615502	3194
ENSMUSG00000095432	protein_coding	Zfp748	ENSMUST00000053289	retained_intron		13	-1	67553138	700
ENSMUSG00000020788	protein_coding	Atp2a3	ENSMUST00000135234	processed_transcript		11	1	72982097	816
ENSMUSG00000108696	processed_pseudogene	Gm5738	ENSMUST00000206016	processed_pseudogene		7	-1	128017220	779
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000208315	retained_intron		8	1	3517226	591
ENSMUSG00000108381	processed_pseudogene	Gm9299	ENSMUST00000206392	processed_pseudogene		7	-1	128042390	1140
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000207430	processed_transcript		8	1	3523802	572
ENSMUSG00000022241	protein_coding	Tars	ENSMUST00000228814	nonsense_mediated_decay		15	-1	11399601	4093
ENSMUSG00000020326	protein_coding	Ccng1	ENSMUST00000020576	protein_coding	principal1	11	-1	40755311	3512
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000207299	processed_transcript		8	1	3535551	353
ENSMUSG00000053395	protein_coding	Cacng8	ENSMUST00000182222	protein_coding	principal1	7	1	3390683	1897
ENSMUSG00000000861	protein_coding	Bcl11a	ENSMUST00000118955	protein_coding		11	1	24080670	1505
ENSMUSG00000117972	processed_pseudogene	Gm6813	ENSMUST00000236365	processed_pseudogene		19	-1	45878126	480
ENSMUSG00000053395	protein_coding	Cacng8	ENSMUST00000203617	protein_coding		7	1	3394418	535
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000207421	protein_coding		8	1	3536555	672
ENSMUSG00000117956	antisense	Gm50196	ENSMUST00000235344	antisense		19	1	45843617	1698
ENSMUSG00000020326	protein_coding	Ccng1	ENSMUST00000151359	processed_transcript		11	-1	40753938	804
ENSMUSG00000000861	protein_coding	Bcl11a	ENSMUST00000127494	processed_transcript		11	1	24142379	566
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000208914	retained_intron		8	1	3536786	464
ENSMUSG00000053395	protein_coding	Cacng8	ENSMUST00000092351	protein_coding	principal1	7	1	3394117	1380
ENSMUSG00000034538	protein_coding	Zfp418	ENSMUST00000051435	protein_coding	principal1	7	1	7171330	2725
ENSMUSG00000074811	protein_coding	Hps6	ENSMUST00000099393	protein_coding	principal1	19	1	46003508	2666
ENSMUSG00000101890	unprocessed_pseudogene	Gm3116	ENSMUST00000189440	unprocessed_pseudogene		1	1	102449353	1116
ENSMUSG00000099989	processed_pseudogene	Gm20281	ENSMUST00000188225	processed_pseudogene		1	-1	102458922	267
ENSMUSG00000034538	protein_coding	Zfp418	ENSMUST00000209387	retained_intron		7	1	7171354	2866
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000207929	retained_intron		8	1	3536921	360
ENSMUSG00000048559	processed_pseudogene	4930555K19Rik	ENSMUST00000060066	processed_pseudogene		15	1	41173487	382
ENSMUSG00000113271	lincRNA	Gm40653	ENSMUST00000220471	lincRNA		13	1	3273235	759
ENSMUSG00000097690	bidirectional_promoter_lncRNA	4930505N22Rik	ENSMUST00000181820	bidirectional_promoter_lncRNA		19	1	45998137	945
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000128805	processed_transcript		7	1	127459611	639
ENSMUSG00000113271	lincRNA	Gm40653	ENSMUST00000222751	lincRNA		13	1	3273277	1041
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000208370	retained_intron		8	1	3536921	514
ENSMUSG00000113271	lincRNA	Gm40653	ENSMUST00000222122	lincRNA		13	1	3273289	1155
ENSMUSG00000113271	lincRNA	Gm40653	ENSMUST00000222272	lincRNA		13	1	3273289	935
ENSMUSG00000116178	processed_pseudogene	Gm49529	ENSMUST00000229823	processed_pseudogene		15	-1	41243158	414
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000207336	protein_coding		8	1	3538036	621
ENSMUSG00000097690	bidirectional_promoter_lncRNA	4930505N22Rik	ENSMUST00000236194	bidirectional_promoter_lncRNA		19	1	45998205	760
ENSMUSG00000114003	processed_pseudogene	Gm9616	ENSMUST00000221154	processed_pseudogene		13	1	3298887	781
ENSMUSG00000106102	processed_pseudogene	Gm43493	ENSMUST00000199837	processed_pseudogene		5	1	138106907	202
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000207317	retained_intron		8	1	3541075	802
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000208691	retained_intron		8	1	3542100	482
ENSMUSG00000020788	protein_coding	Atp2a3	ENSMUST00000163326	protein_coding		11	1	72961169	4606
ENSMUSG00000004565	protein_coding	Pnpla6	ENSMUST00000111070	protein_coding	principal1	8	1	3515384	4496
ENSMUSG00000020788	protein_coding	Atp2a3	ENSMUST00000108485	protein_coding	principal1	11	1	72961169	4520
ENSMUSG00000020788	protein_coding	Atp2a3	ENSMUST00000021142	protein_coding		11	1	72961169	4593
ENSMUSG00000078994	protein_coding	Zfp429	ENSMUST00000224684	protein_coding		13	-1	67399743	524
ENSMUSG00000078994	protein_coding	Zfp429	ENSMUST00000109732	protein_coding	principal1	13	-1	67399767	2056
ENSMUSG00000000861	protein_coding	Bcl11a	ENSMUST00000000881	protein_coding		11	1	24078056	3061
ENSMUSG00000078994	protein_coding	Zfp429	ENSMUST00000181071	protein_coding		13	-1	67399750	2117
ENSMUSG00000000861	protein_coding	Bcl11a	ENSMUST00000124148	retained_intron		11	1	24078147	5885
ENSMUSG00000082516	processed_pseudogene	Gm13342	ENSMUST00000121055	processed_pseudogene		2	-1	22410731	207
ENSMUSG00000078994	protein_coding	Zfp429	ENSMUST00000224825	protein_coding		13	-1	67399819	379
ENSMUSG00000053211	protein_coding	Zfy1	ENSMUST00000189888	protein_coding	principal1	Y	-1	797405	2864
ENSMUSG00000000861	protein_coding	Bcl11a	ENSMUST00000109516	protein_coding		11	1	24078117	2329
ENSMUSG00000047193	protein_coding	Dync2h1	ENSMUST00000140466	protein_coding	principal2	9	-1	7184446	14264
ENSMUSG00000025716	protein_coding	Myo3a	ENSMUST00000138850	processed_transcript		2	1	22227505	1648
ENSMUSG00000000861	protein_coding	Bcl11a	ENSMUST00000109514	protein_coding	principal1	11	1	24078173	5989
ENSMUSG00000025716	protein_coding	Myo3a	ENSMUST00000142435	processed_transcript		2	1	22227505	2831
ENSMUSG00000047193	protein_coding	Dync2h1	ENSMUST00000147193	protein_coding	alternative2	9	-1	7176957	13103
ENSMUSG00000098692	protein_coding	Gm28041	ENSMUST00000166080	nonsense_mediated_decay	principal1	13	-1	67375733	779
ENSMUSG00000053211	protein_coding	Zfy1	ENSMUST00000065545	protein_coding	principal1	Y	-1	797409	2783
ENSMUSG00000022241	protein_coding	Tars	ENSMUST00000022849	protein_coding	principal1	15	-1	11399665	4005
ENSMUSG00000114887	processed_pseudogene	Gm48894	ENSMUST00000225752	processed_pseudogene		13	-1	67725438	379
ENSMUSG00000047193	protein_coding	Dync2h1	ENSMUST00000152934	retained_intron		9	-1	6956689	933
ENSMUSG00000022241	protein_coding	Tars	ENSMUST00000226944	retained_intron		15	-1	11388010	859
ENSMUSG00000096107	transcribed_unprocessed_pseudogene	Gm16505	ENSMUST00000220976	processed_transcript		13	1	3358273	1626
ENSMUSG00000096107	transcribed_unprocessed_pseudogene	Gm16505	ENSMUST00000179981	transcribed_unprocessed_pseudogene		13	1	3361157	232
ENSMUSG00000113636	processed_pseudogene	Gm8616	ENSMUST00000222175	processed_pseudogene		13	1	3352952	1037
ENSMUSG00000022241	protein_coding	Tars	ENSMUST00000228710	retained_intron		15	-1	11387345	617
ENSMUSG00000085516	antisense	4930538E20Rik	ENSMUST00000146717	antisense		11	-1	24172781	497
ENSMUSG00000112968	lincRNA	Gm48530	ENSMUST00000220658	lincRNA		13	-1	3358455	355
ENSMUSG00000022241	protein_coding	Tars	ENSMUST00000228207	retained_intron		15	-1	11390407	916
ENSMUSG00000022241	protein_coding	Tars	ENSMUST00000226597	retained_intron		15	-1	11391998	539
ENSMUSG00000085516	antisense	4930538E20Rik	ENSMUST00000131383	antisense		11	-1	24172824	546
ENSMUSG00000107585	lincRNA	3300002P13Rik	ENSMUST00000204020	lincRNA		7	-1	3423445	1092
ENSMUSG00000022241	protein_coding	Tars	ENSMUST00000226904	retained_intron		15	-1	11392270	785
ENSMUSG00000086612	antisense	Gm12064	ENSMUST00000133819	antisense		11	-1	24115405	533
ENSMUSG00000047193	protein_coding	Dync2h1	ENSMUST00000139671	nonsense_mediated_decay		9	-1	7111543	3335
ENSMUSG00000047193	protein_coding	Dync2h1	ENSMUST00000214191	nonsense_mediated_decay		9	-1	7116629	1771
ENSMUSG00000047193	protein_coding	Dync2h1	ENSMUST00000216097	protein_coding		9	-1	7117588	1789
ENSMUSG00000096209	protein_coding	Olfr510	ENSMUST00000213979	protein_coding	principal1	7	1	108666418	2898
ENSMUSG00000096209	protein_coding	Olfr510	ENSMUST00000216331	protein_coding	principal1	7	1	108666472	3101
ENSMUSG00000096209	protein_coding	Olfr510	ENSMUST00000217170	protein_coding	principal1	7	1	108666472	2997
ENSMUSG00000074895	protein_coding	Eif4e1b	ENSMUST00000142158	protein_coding		13	1	54783998	747
ENSMUSG00000028587	protein_coding	Orc1	ENSMUST00000102744	protein_coding	principal1	4	1	108579454	3014
ENSMUSG00000096209	protein_coding	Olfr510	ENSMUST00000076289	protein_coding	principal1	7	1	108667418	945
ENSMUSG00000074895	protein_coding	Eif4e1b	ENSMUST00000139184	protein_coding		13	1	54784001	668
ENSMUSG00000078995	protein_coding	Zfp456	ENSMUST00000172266	protein_coding		13	-1	67375810	679
ENSMUSG00000028587	protein_coding	Orc1	ENSMUST00000143497	processed_transcript		4	1	108588022	173
ENSMUSG00000036097	protein_coding	Slf2	ENSMUST00000096053	protein_coding	principal1	19	1	44931151	6249
ENSMUSG00000028251	protein_coding	Tstd3	ENSMUST00000029915	protein_coding	principal1	4	-1	21767212	1588
ENSMUSG00000028587	protein_coding	Orc1	ENSMUST00000129931	processed_transcript		4	1	108604091	670
ENSMUSG00000026388	protein_coding	3110009E18Rik	ENSMUST00000027637	protein_coding		1	1	120121187	1007
ENSMUSG00000047193	protein_coding	Dync2h1	ENSMUST00000147056	retained_intron		9	-1	7177044	4365
ENSMUSG00000078995	protein_coding	Zfp456	ENSMUST00000057070	protein_coding	principal1	13	-1	67375810	4126
ENSMUSG00000074895	protein_coding	Eif4e1b	ENSMUST00000132415	protein_coding		13	1	54784001	501
ENSMUSG00000084968	processed_transcript	Gm12743	ENSMUST00000126668	processed_transcript		4	-1	108619849	3700
ENSMUSG00000047193	protein_coding	Dync2h1	ENSMUST00000139115	protein_coding		9	-1	7176965	2892
ENSMUSG00000000732	protein_coding	Icosl	ENSMUST00000105393	protein_coding	principal1	10	1	78069302	2814
ENSMUSG00000078995	protein_coding	Zfp456	ENSMUST00000225787	protein_coding		13	-1	67375713	355
ENSMUSG00000047193	protein_coding	Dync2h1	ENSMUST00000048417	protein_coding	principal2	9	-1	7177046	13972
ENSMUSG00000026388	protein_coding	3110009E18Rik	ENSMUST00000112644	protein_coding	principal1	1	1	120121195	488
ENSMUSG00000039901	protein_coding	Armh3	ENSMUST00000045396	protein_coding	principal1	19	-1	45998488	3676
ENSMUSG00000036097	protein_coding	Slf2	ENSMUST00000236895	nonsense_mediated_decay		19	1	44931160	6180
ENSMUSG00000036097	protein_coding	Slf2	ENSMUST00000236356	retained_intron		19	1	44931163	892
ENSMUSG00000036097	protein_coding	Slf2	ENSMUST00000236057	protein_coding		19	1	44941931	3831
ENSMUSG00000063590	protein_coding	Slc22a28	ENSMUST00000065651	protein_coding	principal1	19	-1	8131982	2004
ENSMUSG00000026388	protein_coding	3110009E18Rik	ENSMUST00000056038	protein_coding		1	1	120121200	401
ENSMUSG00000000732	protein_coding	Icosl	ENSMUST00000217675	retained_intron		10	1	78069360	1787
ENSMUSG00000029729	protein_coding	Zkscan1	ENSMUST00000019660	protein_coding	principal1	5	1	138085084	8261
ENSMUSG00000074895	protein_coding	Eif4e1b	ENSMUST00000132005	protein_coding		13	1	54784001	706
ENSMUSG00000000732	protein_coding	Icosl	ENSMUST00000219038	protein_coding		10	1	78071161	1691
ENSMUSG00000036097	protein_coding	Slf2	ENSMUST00000237505	protein_coding		19	1	44942852	4347
ENSMUSG00000074895	protein_coding	Eif4e1b	ENSMUST00000126785	protein_coding	alternative2	13	1	54784001	841
ENSMUSG00000026388	protein_coding	3110009E18Rik	ENSMUST00000187809	processed_transcript		1	1	120150599	429
ENSMUSG00000000732	protein_coding	Icosl	ENSMUST00000219633	retained_intron		10	1	78073339	2475
ENSMUSG00000026388	protein_coding	3110009E18Rik	ENSMUST00000153037	protein_coding		1	1	120150671	637
ENSMUSG00000074895	protein_coding	Eif4e1b	ENSMUST00000126525	nonsense_mediated_decay		13	1	54784003	652
ENSMUSG00000112662	lincRNA	Gm47922	ENSMUST00000218616	lincRNA		10	-1	78138097	963
ENSMUSG00000026388	protein_coding	3110009E18Rik	ENSMUST00000128578	processed_transcript		1	1	120160480	806
ENSMUSG00000118204	antisense	4930414N06Rik	ENSMUST00000235330	antisense		19	-1	44973281	815
ENSMUSG00000041439	protein_coding	Mfsd6	ENSMUST00000156876	protein_coding	principal4	1	-1	52727462	4932
ENSMUSG00000118204	antisense	4930414N06Rik	ENSMUST00000237298	antisense		19	-1	44984529	737
ENSMUSG00000098905	protein_coding	Zfp953	ENSMUST00000081582	protein_coding	principal1	13	-1	67360605	4677
ENSMUSG00000025716	protein_coding	Myo3a	ENSMUST00000153002	protein_coding		2	1	22241057	2270
ENSMUSG00000029729	protein_coding	Zkscan1	ENSMUST00000110963	protein_coding		5	1	138085120	4670
ENSMUSG00000118204	antisense	4930414N06Rik	ENSMUST00000236202	antisense		19	-1	44984550	610
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000106292	protein_coding	principal1	7	1	127470371	2175
ENSMUSG00000039901	protein_coding	Armh3	ENSMUST00000235131	processed_transcript		19	-1	45998488	1942
ENSMUSG00000103398	TEC	Gm38307	ENSMUST00000195630	TEC		13	1	67451658	1840
ENSMUSG00000074895	protein_coding	Eif4e1b	ENSMUST00000141398	protein_coding		13	1	54784003	727
ENSMUSG00000039901	protein_coding	Armh3	ENSMUST00000236730	retained_intron		19	-1	45936429	632
ENSMUSG00000029729	protein_coding	Zkscan1	ENSMUST00000110962	protein_coding		5	1	138092640	4843
ENSMUSG00000117932	processed_pseudogene	Gm21046	ENSMUST00000237143	processed_pseudogene		18	1	70781887	1447
ENSMUSG00000109935	processed_pseudogene	Gm7619	ENSMUST00000210649	processed_pseudogene		8	-1	65132314	1282
ENSMUSG00000029729	protein_coding	Zkscan1	ENSMUST00000066617	protein_coding		5	1	138085084	8042
ENSMUSG00000118271	processed_pseudogene	Gm50262	ENSMUST00000236972	processed_pseudogene		18	-1	70907651	238
ENSMUSG00000110283	processed_pseudogene	Gm45249	ENSMUST00000211021	processed_pseudogene		8	1	65184244	348
ENSMUSG00000041439	protein_coding	Mfsd6	ENSMUST00000147758	protein_coding		1	-1	52709195	3716
ENSMUSG00000041439	protein_coding	Mfsd6	ENSMUST00000188126	retained_intron		1	-1	52660298	2864
ENSMUSG00000110086	protein_coding	Gm45623	ENSMUST00000210744	protein_coding	principal1	13	-1	56753827	1457
ENSMUSG00000001494	protein_coding	Sost	ENSMUST00000001534	protein_coding	principal1	11	-1	101967015	2066
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000210813	protein_coding		7	1	45486262	2153
ENSMUSG00000110226	processed_pseudogene	Gm7624	ENSMUST00000209702	processed_pseudogene		8	-1	65279187	435
ENSMUSG00000044156	protein_coding	Hepacam2	ENSMUST00000049985	protein_coding	principal1	6	-1	3494597	2328
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000133817	protein_coding		7	1	127471019	450
ENSMUSG00000041439	protein_coding	Mfsd6	ENSMUST00000087701	protein_coding	alternative2	1	-1	52727462	3493
ENSMUSG00000074895	protein_coding	Eif4e1b	ENSMUST00000132728	protein_coding	principal3	13	1	54784003	1897
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000133938	protein_coding		7	1	127471029	656
ENSMUSG00000044156	protein_coding	Hepacam2	ENSMUST00000201276	retained_intron		6	-1	3487415	1945
ENSMUSG00000038784	protein_coding	Cnot4	ENSMUST00000200954	retained_intron		6	-1	35024864	2800
ENSMUSG00000044156	protein_coding	Hepacam2	ENSMUST00000201607	protein_coding		6	-1	3487429	796
ENSMUSG00000074639	protein_coding	Rdh16f2	ENSMUST00000092058	protein_coding	principal1	10	1	127866474	1265
ENSMUSG00000041439	protein_coding	Mfsd6	ENSMUST00000149887	processed_transcript		1	-1	52669351	629
ENSMUSG00000044156	protein_coding	Hepacam2	ENSMUST00000200854	protein_coding		6	-1	3498298	690
ENSMUSG00000025716	protein_coding	Myo3a	ENSMUST00000138863	protein_coding		2	1	22558215	2130
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000147202	retained_intron		7	1	127471052	468
ENSMUSG00000074895	protein_coding	Eif4e1b	ENSMUST00000110003	protein_coding	principal3	13	1	54784013	2131
ENSMUSG00000044156	protein_coding	Hepacam2	ENSMUST00000200972	retained_intron		6	-1	3487396	3786
ENSMUSG00000041439	protein_coding	Mfsd6	ENSMUST00000147421	retained_intron		1	-1	52727358	2881
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000206118	retained_intron		7	1	127471449	1656
ENSMUSG00000100302	sense_intronic	Gm29670	ENSMUST00000190228	sense_intronic		1	-1	52704762	2491
ENSMUSG00000113534	processed_pseudogene	Gm19163	ENSMUST00000223313	processed_pseudogene		13	-1	3457770	780
ENSMUSG00000025716	protein_coding	Myo3a	ENSMUST00000149423	processed_transcript		2	1	22579711	332
ENSMUSG00000028636	protein_coding	Ppcs	ENSMUST00000030385	protein_coding	principal1	4	-1	119422420	1443
ENSMUSG00000037601	protein_coding	Nme1	ENSMUST00000135884	protein_coding	principal1	11	-1	93968521	3181
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000033095	protein_coding	principal1	7	1	127471490	2402
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000025474	protein_coding	principal1	18	1	62977831	3567
ENSMUSG00000037601	protein_coding	Nme1	ENSMUST00000021220	protein_coding		11	-1	93966043	493
ENSMUSG00000028636	protein_coding	Ppcs	ENSMUST00000106316	protein_coding		4	-1	119422376	954
ENSMUSG00000074895	protein_coding	Eif4e1b	ENSMUST00000152204	protein_coding		13	1	54784020	859
ENSMUSG00000090622	protein_coding	A930033H14Rik	ENSMUST00000170048	protein_coding	principal1	10	-1	69213098	2969
ENSMUSG00000107816	processed_pseudogene	Gm29799	ENSMUST00000204061	processed_pseudogene		7	1	140784515	487
ENSMUSG00000037601	protein_coding	Nme1	ENSMUST00000107844	protein_coding		11	-1	93968272	452
ENSMUSG00000028636	protein_coding	Ppcs	ENSMUST00000140641	retained_intron		4	-1	119422358	1543
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000142532	retained_intron		7	1	127471901	1049
ENSMUSG00000085882	processed_transcript	2610507I01Rik	ENSMUST00000154354	processed_transcript		11	-1	59202385	1360
ENSMUSG00000054256	protein_coding	Msi1	ENSMUST00000150779	protein_coding	principal1	5	1	115429599	3133
ENSMUSG00000025716	protein_coding	Myo3a	ENSMUST00000044749	protein_coding	principal1	2	1	22227503	5082
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000132819	nonsense_mediated_decay		7	1	127473623	709
ENSMUSG00000023150	protein_coding	Ivns1abp	ENSMUST00000023918	protein_coding	principal1	1	1	151344477	3511
ENSMUSG00000082884	unprocessed_pseudogene	Gm13339	ENSMUST00000120651	unprocessed_pseudogene		2	-1	22590533	510
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000107759	protein_coding		7	1	45486263	1675
ENSMUSG00000091228	protein_coding	Gm20390	ENSMUST00000170303	protein_coding	principal1	11	-1	93968293	991
ENSMUSG00000083863	unprocessed_pseudogene	Gm13341	ENSMUST00000120780	unprocessed_pseudogene		2	-1	22587962	672
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000132124	retained_intron		7	1	127475501	944
ENSMUSG00000083563	unprocessed_pseudogene	Gm13340	ENSMUST00000117219	unprocessed_pseudogene		2	-1	22589647	1545
ENSMUSG00000030822	protein_coding	Prr14	ENSMUST00000206915	protein_coding		7	1	127475519	653
ENSMUSG00000004612	protein_coding	Nkg7	ENSMUST00000070518	protein_coding	principal1	7	1	43437073	881
ENSMUSG00000024306	protein_coding	Ccdc178	ENSMUST00000234736	protein_coding	principal1	18	-1	22171442	3515
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000107758	protein_coding		7	1	45486364	1597
ENSMUSG00000093384	processed_pseudogene	Gm20689	ENSMUST00000176033	processed_pseudogene		3	-1	68900449	279
ENSMUSG00000086502	processed_transcript	B130055M24Rik	ENSMUST00000147487	processed_transcript		7	1	127448636	1142
ENSMUSG00000093402	processed_pseudogene	Gm18588	ENSMUST00000177308	processed_pseudogene		3	-1	68902758	492
ENSMUSG00000086502	processed_transcript	B130055M24Rik	ENSMUST00000144796	processed_transcript		7	1	127448640	1778
ENSMUSG00000024306	protein_coding	Ccdc178	ENSMUST00000025160	protein_coding	principal1	18	-1	22171396	3335
ENSMUSG00000004612	protein_coding	Nkg7	ENSMUST00000206741	protein_coding		7	1	43437130	686
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000033182	protein_coding	principal1	7	1	105736592	1795
ENSMUSG00000108465	TEC	Gm45110	ENSMUST00000205704	TEC		7	1	127455469	1402
ENSMUSG00000004612	protein_coding	Nkg7	ENSMUST00000206251	retained_intron		7	1	43437504	526
ENSMUSG00000023150	protein_coding	Ivns1abp	ENSMUST00000111887	protein_coding		1	1	151344509	2783
ENSMUSG00000117816	processed_pseudogene	Gm50360	ENSMUST00000235901	processed_pseudogene		18	1	76321824	436
ENSMUSG00000024306	protein_coding	Ccdc178	ENSMUST00000234661	protein_coding		18	-1	22171378	631
ENSMUSG00000117960	lincRNA	Gm31933	ENSMUST00000235949	lincRNA		18	-1	76632870	1882
ENSMUSG00000078815	protein_coding	Cacng6	ENSMUST00000183200	protein_coding	principal1	7	1	3424195	1977
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000237864	nonsense_mediated_decay		18	1	62977847	731
ENSMUSG00000024306	protein_coding	Ccdc178	ENSMUST00000115837	protein_coding	principal1	18	-1	22166476	2979
ENSMUSG00000038991	protein_coding	Txndc5	ENSMUST00000035988	protein_coding	principal3	13	-1	38528490	2843
ENSMUSG00000078815	protein_coding	Cacng6	ENSMUST00000108647	protein_coding		7	1	3424662	868
ENSMUSG00000054256	protein_coding	Msi1	ENSMUST00000151444	retained_intron		5	1	115429699	2636
ENSMUSG00000113897	lincRNA	Gm48227	ENSMUST00000222762	lincRNA		12	-1	16802634	303
ENSMUSG00000098224	processed_pseudogene	Gm7985	ENSMUST00000183329	processed_pseudogene		12	-1	71847291	981
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000237157	nonsense_mediated_decay		18	1	62977847	1359
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000149695	nonsense_mediated_decay		7	1	105736671	2278
ENSMUSG00000054256	protein_coding	Msi1	ENSMUST00000067168	protein_coding		5	1	115429997	1254
ENSMUSG00000025480	protein_coding	Syce1	ENSMUST00000026553	protein_coding	principal1	7	-1	140787852	1460
ENSMUSG00000023150	protein_coding	Ivns1abp	ENSMUST00000097543	protein_coding		1	1	151344518	3337
ENSMUSG00000099643	lincRNA	Gm29162	ENSMUST00000188893	lincRNA		Y	1	88214304	1499
ENSMUSG00000038991	protein_coding	Txndc5	ENSMUST00000160653	protein_coding	alternative2	13	-1	38527914	2586
ENSMUSG00000048921	protein_coding	Zfp689	ENSMUST00000053392	protein_coding	principal1	7	-1	127449158	3621
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000126870	retained_intron		18	1	62977861	352
ENSMUSG00000054256	protein_coding	Msi1	ENSMUST00000131079	protein_coding		5	1	115430605	807
ENSMUSG00000025480	protein_coding	Syce1	ENSMUST00000211616	protein_coding		7	-1	140787837	281
ENSMUSG00000054256	protein_coding	Msi1	ENSMUST00000145005	retained_intron		5	1	115433392	367
ENSMUSG00000099643	lincRNA	Gm29162	ENSMUST00000187723	lincRNA		Y	1	88214758	437
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000163389	protein_coding	principal1	7	1	105736725	1749
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000137849	retained_intron		18	1	62977876	624
ENSMUSG00000048921	protein_coding	Zfp689	ENSMUST00000106299	protein_coding		7	-1	127448993	1417
ENSMUSG00000054256	protein_coding	Msi1	ENSMUST00000139918	retained_intron		5	1	115433751	806
ENSMUSG00000007613	protein_coding	Tgfbr1	ENSMUST00000007757	protein_coding	principal3	4	1	47353222	5756
ENSMUSG00000099777	unprocessed_pseudogene	Gm21777	ENSMUST00000189307	unprocessed_pseudogene		Y	-1	88260983	696
ENSMUSG00000054256	protein_coding	Msi1	ENSMUST00000145840	retained_intron		5	1	115434300	581
ENSMUSG00000023150	protein_coding	Ivns1abp	ENSMUST00000186745	nonsense_mediated_decay		1	1	151344578	3315
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000150267	protein_coding		18	1	62977901	1129
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000136687	protein_coding		7	1	105736733	1303
ENSMUSG00000100930	lincRNA	Gm28866	ENSMUST00000187298	lincRNA		Y	-1	88270188	2167
ENSMUSG00000115525	processed_pseudogene	Gm5213	ENSMUST00000228654	processed_pseudogene		15	1	38238109	551
ENSMUSG00000054256	protein_coding	Msi1	ENSMUST00000136586	protein_coding		5	1	115434996	726
ENSMUSG00000023150	protein_coding	Ivns1abp	ENSMUST00000190872	protein_coding		1	1	151361247	601
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000236087	nonsense_mediated_decay		18	1	62977907	549
ENSMUSG00000007613	protein_coding	Tgfbr1	ENSMUST00000044234	protein_coding	alternative2	4	1	47353307	2861
ENSMUSG00000054256	protein_coding	Msi1	ENSMUST00000130849	retained_intron		5	1	115435498	599
ENSMUSG00000115057	processed_pseudogene	Gm8705	ENSMUST00000228373	processed_pseudogene		15	-1	38244248	885
ENSMUSG00000100954	antisense	Gm10138	ENSMUST00000185848	antisense		1	-1	151344082	475
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000236925	protein_coding		18	1	62977909	1191
ENSMUSG00000067825	protein_coding	Pex26	ENSMUST00000118234	protein_coding		6	1	121183667	3778
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000235372	protein_coding		18	1	62977966	826
ENSMUSG00000115307	lincRNA	Gm49313	ENSMUST00000227099	lincRNA		15	-1	38255310	638
ENSMUSG00000107353	antisense	4930430O22Rik	ENSMUST00000202548	antisense		5	-1	115436644	579
ENSMUSG00000100954	antisense	Gm10138	ENSMUST00000186597	antisense		1	-1	151345231	2498
ENSMUSG00000007613	protein_coding	Tgfbr1	ENSMUST00000123962	processed_transcript		4	1	47353598	372
ENSMUSG00000107353	antisense	4930430O22Rik	ENSMUST00000202251	antisense		5	-1	115436606	539
ENSMUSG00000100954	antisense	Gm10138	ENSMUST00000206952	pseudogene		1	-1	151344736	366
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000237483	protein_coding		18	1	62977980	373
ENSMUSG00000116790	processed_pseudogene	Gm49596	ENSMUST00000231507	processed_pseudogene		16	1	19631902	441
ENSMUSG00000007613	protein_coding	Tgfbr1	ENSMUST00000126171	protein_coding		4	1	47353610	1829
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000133593	retained_intron		18	1	62980236	693
ENSMUSG00000007613	protein_coding	Tgfbr1	ENSMUST00000107725	protein_coding		4	1	47386216	1713
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000236193	retained_intron		18	1	62985660	1286
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000154563	processed_transcript		18	1	62985956	398
ENSMUSG00000038991	protein_coding	Txndc5	ENSMUST00000162075	protein_coding		13	-1	38528824	2619
ENSMUSG00000027330	protein_coding	Cdc25b	ENSMUST00000028804	protein_coding	principal3	2	1	131186949	3089
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000155440	retained_intron		18	1	62986039	664
ENSMUSG00000038991	protein_coding	Txndc5	ENSMUST00000160046	retained_intron		13	-1	38505942	2781
ENSMUSG00000043119	protein_coding	Olfr448	ENSMUST00000214529	protein_coding	principal1	6	1	42890441	2764
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000235974	retained_intron		18	1	62986650	1108
ENSMUSG00000043119	protein_coding	Olfr448	ENSMUST00000213952	protein_coding	principal1	6	1	42890728	3024
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000124837	processed_transcript		18	1	62988210	583
ENSMUSG00000024581	protein_coding	Napg	ENSMUST00000236914	retained_intron		18	1	62989976	2075
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000145123	retained_intron		7	1	105737101	698
ENSMUSG00000043119	protein_coding	Olfr448	ENSMUST00000058668	protein_coding	principal1	6	1	42896453	933
ENSMUSG00000070570	protein_coding	Slc17a7	ENSMUST00000085374	protein_coding	principal1	7	1	45163949	2915
ENSMUSG00000114399	processed_pseudogene	Gm47994	ENSMUST00000225109	processed_pseudogene		13	1	38514096	780
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000107762	protein_coding	alternative2	7	1	45513706	1883
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000154626	retained_intron		7	1	105737123	886
ENSMUSG00000040134	protein_coding	Rdh7	ENSMUST00000047199	protein_coding	principal1	10	-1	127888817	1678
ENSMUSG00000113981	TEC	Gm47011	ENSMUST00000222578	TEC		13	-1	14379573	1587
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000225920	protein_coding	principal2	19	1	36348309	6443
ENSMUSG00000030737	protein_coding	Slco2b1	ENSMUST00000032985	protein_coding	principal3	7	-1	99711340	4381
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000148971	retained_intron		7	1	105740188	909
ENSMUSG00000046058	protein_coding	Eid2	ENSMUST00000059596	protein_coding	principal1	7	1	28267881	1392
ENSMUSG00000070570	protein_coding	Slc17a7	ENSMUST00000209634	protein_coding		7	1	45164024	1860
ENSMUSG00000020857	protein_coding	Nme2	ENSMUST00000021217	protein_coding	principal1	11	-1	93956259	1012
ENSMUSG00000113654	antisense	Gm30893	ENSMUST00000220479	antisense		13	1	14521486	903
ENSMUSG00000040134	protein_coding	Rdh7	ENSMUST00000130374	processed_transcript		10	-1	127888330	124
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000224805	processed_transcript		19	1	36348537	1824
ENSMUSG00000017165	protein_coding	Gast	ENSMUST00000017309	protein_coding	principal1	11	1	100334407	460
ENSMUSG00000070570	protein_coding	Slc17a7	ENSMUST00000210498	retained_intron		7	1	45168950	2346
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000024233	protein_coding	principal5	7	1	45513724	1749
ENSMUSG00000113654	antisense	Gm30893	ENSMUST00000222432	antisense		13	1	14522516	589
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000127298	nonsense_mediated_decay		7	1	105740324	688
ENSMUSG00000115437	TEC	Gm49314	ENSMUST00000228508	TEC		15	-1	38276441	1042
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000071267	protein_coding	principal2	19	1	36379068	1508
ENSMUSG00000070705	protein_coding	Eid2b	ENSMUST00000094651	protein_coding	principal1	7	1	28277739	1751
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000210532	protein_coding		7	1	45514581	589
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000153557	nonsense_mediated_decay		7	1	105740511	398
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000085331	protein_coding		7	1	45514602	1525
ENSMUSG00000028312	protein_coding	Smc2	ENSMUST00000102915	protein_coding	principal1	4	1	52439243	5404
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000151108	retained_intron		7	1	105740972	756
ENSMUSG00000027330	protein_coding	Cdc25b	ENSMUST00000079857	protein_coding	alternative2	2	1	131186958	3004
ENSMUSG00000020857	protein_coding	Nme2	ENSMUST00000072566	protein_coding	principal1	11	-1	93955783	734
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000152508	retained_intron		7	1	105741182	608
ENSMUSG00000041247	protein_coding	Lamp3	ENSMUST00000081880	protein_coding	principal1	16	-1	19706375	3356
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000210299	protein_coding		7	1	45514606	725
ENSMUSG00000109070	unprocessed_pseudogene	Olfr511-ps1	ENSMUST00000207188	unprocessed_pseudogene		7	1	108696201	217
ENSMUSG00000030890	protein_coding	Ilk	ENSMUST00000130565	nonsense_mediated_decay		7	1	105741583	821
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000210868	protein_coding		7	1	45514637	1664
ENSMUSG00000030737	protein_coding	Slco2b1	ENSMUST00000107086	protein_coding	principal3	7	-1	99695809	3993
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000224772	protein_coding	alternative1	19	1	36379106	1266
ENSMUSG00000028312	protein_coding	Smc2	ENSMUST00000117280	protein_coding	principal1	4	1	52439243	5328
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000224679	protein_coding	alternative1	19	1	36379106	1269
ENSMUSG00000027330	protein_coding	Cdc25b	ENSMUST00000125423	retained_intron		2	1	131188158	524
ENSMUSG00000023467	protein_coding	Tulp2	ENSMUST00000209763	protein_coding		7	1	45515808	259
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000224971	protein_coding		19	1	36392244	599
ENSMUSG00000024829	protein_coding	Mrpl21	ENSMUST00000025745	protein_coding	principal3	19	1	3282901	1138
ENSMUSG00000004988	protein_coding	Fxyd4	ENSMUST00000203082	protein_coding	principal1	6	-1	117937692	815
ENSMUSG00000067825	protein_coding	Pex26	ENSMUST00000088561	protein_coding	principal3	6	1	121183667	4093
ENSMUSG00000056946	protein_coding	Olfr512	ENSMUST00000209620	protein_coding	principal1	7	1	108713320	1056
ENSMUSG00000027330	protein_coding	Cdc25b	ENSMUST00000141732	retained_intron		2	1	131191743	770
ENSMUSG00000112251	processed_pseudogene	Gm47488	ENSMUST00000219288	processed_pseudogene		12	-1	52753108	409
ENSMUSG00000056946	protein_coding	Olfr512	ENSMUST00000074730	protein_coding		7	1	108713320	1056
ENSMUSG00000028312	protein_coding	Smc2	ENSMUST00000131163	processed_transcript		4	1	52439252	643
ENSMUSG00000070570	protein_coding	Slc17a7	ENSMUST00000210540	retained_intron		7	1	45169558	2722
ENSMUSG00000074404	lincRNA	Gm1698	ENSMUST00000136749	lincRNA		8	1	27604351	2313
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000225411	protein_coding	alternative1	19	1	36409748	1626
ENSMUSG00000070570	protein_coding	Slc17a7	ENSMUST00000211652	retained_intron		7	1	45169901	3080
ENSMUSG00000059991	protein_coding	Nptx2	ENSMUST00000071782	protein_coding	principal1	5	1	144545902	2536
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000225050	retained_intron		19	1	36434584	506
ENSMUSG00000067825	protein_coding	Pex26	ENSMUST00000137432	protein_coding		6	1	121183802	745
ENSMUSG00000074404	lincRNA	Gm1698	ENSMUST00000211230	lincRNA		8	1	27604377	1501
ENSMUSG00000027330	protein_coding	Cdc25b	ENSMUST00000145556	retained_intron		2	1	131192874	673
ENSMUSG00000028312	protein_coding	Smc2	ENSMUST00000146787	processed_transcript		4	1	52439266	599
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000224859	protein_coding		19	1	36437169	430
ENSMUSG00000027330	protein_coding	Cdc25b	ENSMUST00000138669	retained_intron		2	1	131191813	756
ENSMUSG00000028312	protein_coding	Smc2	ENSMUST00000142227	protein_coding		4	1	52439269	1660
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000073466	protein_coding		16	-1	91728975	1965
ENSMUSG00000110333	protein_coding	Gm45861	ENSMUST00000209669	protein_coding	principal1	8	1	27447100	7184
ENSMUSG00000067825	protein_coding	Pex26	ENSMUST00000120066	protein_coding	alternative2	6	1	121183889	3861
ENSMUSG00000084380	processed_pseudogene	Tmc4-ps	ENSMUST00000117819	processed_pseudogene		4	-1	52444172	258
ENSMUSG00000027330	protein_coding	Cdc25b	ENSMUST00000132727	retained_intron		2	1	131191350	453
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000225185	retained_intron		19	1	36439654	3941
ENSMUSG00000110333	protein_coding	Gm45861	ENSMUST00000210427	nonsense_mediated_decay		8	1	27447391	6111
ENSMUSG00000024805	protein_coding	Pcgf5	ENSMUST00000062389	protein_coding	principal2	19	1	36409748	1566
ENSMUSG00000024829	protein_coding	Mrpl21	ENSMUST00000139844	retained_intron		19	1	3283055	674
ENSMUSG00000067825	protein_coding	Pex26	ENSMUST00000139393	retained_intron		6	1	121183898	1957
ENSMUSG00000055188	antisense	Rbm3os	ENSMUST00000124018	antisense		X	1	8145429	839
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000117644	protein_coding		16	-1	91728802	1727
ENSMUSG00000079419	protein_coding	Ms4a6c	ENSMUST00000165310	protein_coding	principal1	19	1	11469366	1841
ENSMUSG00000099556	antisense	Gm28857	ENSMUST00000188068	antisense		1	-1	130741327	425
ENSMUSG00000067825	protein_coding	Pex26	ENSMUST00000125633	nonsense_mediated_decay		6	1	121183898	1760
ENSMUSG00000046753	protein_coding	Ccdc66	ENSMUST00000223689	protein_coding	principal2	14	-1	27508460	4262
ENSMUSG00000055188	antisense	Rbm3os	ENSMUST00000133616	antisense		X	1	8145917	380
ENSMUSG00000024829	protein_coding	Mrpl21	ENSMUST00000155870	retained_intron		19	1	3283060	678
ENSMUSG00000085246	antisense	Gm15893	ENSMUST00000143208	antisense		11	1	88356291	1559
ENSMUSG00000114409	processed_pseudogene	Gm9042	ENSMUST00000225814	processed_pseudogene		19	1	36404447	1664
ENSMUSG00000107915	TEC	Gm44014	ENSMUST00000205150	TEC		6	-1	121198183	1509
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000140199	processed_transcript		16	-1	91692992	691
ENSMUSG00000114235	antisense	F530104D19Rik	ENSMUST00000224716	antisense		19	-1	36451157	1120
ENSMUSG00000046753	protein_coding	Ccdc66	ENSMUST00000224837	processed_transcript		14	-1	27483875	514
ENSMUSG00000024829	protein_coding	Mrpl21	ENSMUST00000025743	protein_coding	alternative2	19	1	3283060	802
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000122254	protein_coding		16	-1	91728623	845
ENSMUSG00000079419	protein_coding	Ms4a6c	ENSMUST00000187462	retained_intron		19	1	11469425	639
ENSMUSG00000046753	protein_coding	Ccdc66	ENSMUST00000050480	protein_coding	alternative2	14	-1	27508445	2457
ENSMUSG00000045883	protein_coding	Olfr1461	ENSMUST00000207113	protein_coding	principal1	19	1	13163000	3481
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000144472	protein_coding		16	-1	91708873	817
ENSMUSG00000030737	protein_coding	Slco2b1	ENSMUST00000107088	protein_coding	alternative2	7	-1	99707161	4369
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000155599	processed_transcript		X	-1	8142918	2326
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000124282	protein_coding		16	-1	91717469	1187
ENSMUSG00000099757	processed_transcript	BE692007	ENSMUST00000186054	antisense		19	-1	11484577	954
ENSMUSG00000024829	protein_coding	Mrpl21	ENSMUST00000141610	nonsense_mediated_decay		19	1	3283064	469
ENSMUSG00000114285	processed_pseudogene	Gm47773	ENSMUST00000224612	processed_pseudogene		19	1	36361343	469
ENSMUSG00000045883	protein_coding	Olfr1461	ENSMUST00000208489	protein_coding		19	1	13163758	454
ENSMUSG00000113480	processed_pseudogene	Gm47413	ENSMUST00000221451	processed_pseudogene		13	1	50241709	249
ENSMUSG00000030737	protein_coding	Slco2b1	ENSMUST00000154295	protein_coding		7	-1	99664932	768
ENSMUSG00000035215	protein_coding	Lsm7	ENSMUST00000220225	protein_coding		10	-1	80855209	1129
ENSMUSG00000024829	protein_coding	Mrpl21	ENSMUST00000154785	retained_intron		19	1	3286811	604
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000114023	protein_coding	principal1	16	-1	91728701	1154
ENSMUSG00000099757	processed_transcript	BE692007	ENSMUST00000189306	antisense		19	-1	11484578	362
ENSMUSG00000045883	protein_coding	Olfr1461	ENSMUST00000053772	protein_coding	principal1	19	1	13165016	939
ENSMUSG00000099757	processed_transcript	BE692007	ENSMUST00000186500	retained_intron		19	-1	11484535	4331
ENSMUSG00000030737	protein_coding	Slco2b1	ENSMUST00000208713	protein_coding		7	-1	99691769	660
ENSMUSG00000042380	protein_coding	Smim12	ENSMUST00000142029	protein_coding	principal1	4	1	127243784	1022
ENSMUSG00000004988	protein_coding	Fxyd4	ENSMUST00000204214	protein_coding	principal1	6	-1	117937335	550
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000144877	protein_coding		16	-1	91699288	1128
ENSMUSG00000063932	protein_coding	Poteg	ENSMUST00000211657	retained_intron		8	1	27447670	1440
ENSMUSG00000004988	protein_coding	Fxyd4	ENSMUST00000203066	protein_coding		6	-1	117937335	522
ENSMUSG00000030737	protein_coding	Slco2b1	ENSMUST00000208225	protein_coding		7	-1	99695593	636
ENSMUSG00000109519	processed_pseudogene	Gm18806	ENSMUST00000207607	processed_pseudogene		7	1	81742345	1775
ENSMUSG00000004988	protein_coding	Fxyd4	ENSMUST00000204950	protein_coding		6	-1	117937335	586
ENSMUSG00000045708	protein_coding	Olfr447	ENSMUST00000216408	protein_coding	principal1	6	1	42908878	3185
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000231499	protein_coding		16	-1	91728597	592
ENSMUSG00000004988	protein_coding	Fxyd4	ENSMUST00000203433	protein_coding		6	-1	117937335	670
ENSMUSG00000030737	protein_coding	Slco2b1	ENSMUST00000145381	protein_coding		7	-1	99695628	796
ENSMUSG00000082047	processed_pseudogene	Gm12948	ENSMUST00000119406	processed_pseudogene		4	-1	127297465	682
ENSMUSG00000045708	protein_coding	Olfr447	ENSMUST00000055763	protein_coding	principal1	6	1	42911525	933
ENSMUSG00000030737	protein_coding	Slco2b1	ENSMUST00000137914	protein_coding		7	-1	99695582	405
ENSMUSG00000035215	protein_coding	Lsm7	ENSMUST00000035775	protein_coding	principal1	10	-1	80855209	468
ENSMUSG00000037652	protein_coding	Phc3	ENSMUST00000168645	protein_coding	principal3	3	-1	30969401	10976
ENSMUSG00000046723	protein_coding	Adam24	ENSMUST00000051614	protein_coding	principal1	8	1	40675077	2887
ENSMUSG00000030737	protein_coding	Slco2b1	ENSMUST00000207090	protein_coding		7	-1	99695582	569
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000141664	protein_coding		16	-1	91728600	762
ENSMUSG00000117832	processed_pseudogene	Gm50263	ENSMUST00000237858	processed_pseudogene		18	1	44821133	178
ENSMUSG00000109559	antisense	Gm34280	ENSMUST00000208250	antisense		7	1	99694297	2114
ENSMUSG00000004988	protein_coding	Fxyd4	ENSMUST00000203921	retained_intron		6	-1	117937335	470
ENSMUSG00000042510	protein_coding	AA986860	ENSMUST00000039323	protein_coding	principal1	1	1	130731976	2909
ENSMUSG00000004988	protein_coding	Fxyd4	ENSMUST00000205111	retained_intron		6	-1	117935953	441
ENSMUSG00000107325	TEC	Gm43425	ENSMUST00000201793	TEC		18	1	44821769	3291
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000128975	retained_intron		16	-1	91728598	600
ENSMUSG00000084129	processed_pseudogene	Hmgb1-ps1	ENSMUST00000119350	processed_pseudogene		11	1	41141763	634
ENSMUSG00000004988	protein_coding	Fxyd4	ENSMUST00000203842	retained_intron		6	-1	117937335	1189
ENSMUSG00000058240	protein_coding	Cryzl1	ENSMUST00000123751	protein_coding		16	-1	91728608	512
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000026671	protein_coding	principal1	11	1	119603149	6594
ENSMUSG00000085095	antisense	Gm15635	ENSMUST00000131160	antisense		7	1	99660130	917
ENSMUSG00000085095	antisense	Gm15635	ENSMUST00000208024	antisense		7	1	99664944	2539
ENSMUSG00000042510	protein_coding	AA986860	ENSMUST00000186185	processed_transcript		1	1	130732110	430
ENSMUSG00000041062	protein_coding	Mslnl	ENSMUST00000047098	protein_coding	principal1	17	1	25736042	2626
ENSMUSG00000004988	protein_coding	Fxyd4	ENSMUST00000005114	protein_coding	principal1	6	-1	117937335	1199
ENSMUSG00000094319	IG_V_gene	Igkv4-54	ENSMUST00000199437	IG_V_gene		6	-1	69632178	352
ENSMUSG00000087240	antisense	Gm15976	ENSMUST00000129701	antisense		16	1	91924438	429
ENSMUSG00000042510	protein_coding	AA986860	ENSMUST00000190859	retained_intron		1	1	130740272	3205
ENSMUSG00000094319	IG_V_gene	Igkv4-54	ENSMUST00000177697	protein_coding	principal1	6	-1	69631933	288
ENSMUSG00000085095	antisense	Gm15635	ENSMUST00000127834	antisense		7	1	99665101	371
ENSMUSG00000073111	protein_coding	Olfr446	ENSMUST00000215369	protein_coding	principal1	6	1	42921377	4399
ENSMUSG00000109658	processed_pseudogene	Gm45660	ENSMUST00000210267	processed_pseudogene		8	-1	40683647	151
ENSMUSG00000073111	protein_coding	Olfr446	ENSMUST00000216199	protein_coding	principal1	6	1	42921383	4218
ENSMUSG00000110315	processed_pseudogene	Gm8423	ENSMUST00000211387	processed_pseudogene		8	-1	40713287	607
ENSMUSG00000050234	protein_coding	Gja4	ENSMUST00000053753	protein_coding	principal1	4	-1	127314039	1685
ENSMUSG00000085095	antisense	Gm15635	ENSMUST00000148972	antisense		7	1	99665153	554
ENSMUSG00000073111	protein_coding	Olfr446	ENSMUST00000215686	protein_coding	principal1	6	1	42921388	4210
ENSMUSG00000028409	protein_coding	Smu1	ENSMUST00000030117	protein_coding	principal1	4	-1	40757923	2418
ENSMUSG00000063751	processed_transcript	Platr8	ENSMUST00000146110	processed_transcript		2	-1	109913319	1349
ENSMUSG00000073111	protein_coding	Olfr446	ENSMUST00000101461	protein_coding	principal1	6	1	42927233	927
ENSMUSG00000095753	IG_V_gene	Igkv4-53	ENSMUST00000198328	IG_V_gene		6	-1	69649363	367
ENSMUSG00000035215	protein_coding	Lsm7	ENSMUST00000220406	processed_transcript		10	-1	80855143	550
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000001884	protein_coding	principal2	7	1	101663633	4627
ENSMUSG00000095753	IG_V_gene	Igkv4-53	ENSMUST00000166380	IG_V_gene	principal1	6	-1	69649115	292
ENSMUSG00000035215	protein_coding	Lsm7	ENSMUST00000218897	processed_transcript		10	-1	80855168	571
ENSMUSG00000086475	lincRNA	Platr13	ENSMUST00000133945	lincRNA		11	1	41218837	375
ENSMUSG00000035215	protein_coding	Lsm7	ENSMUST00000218119	processed_transcript		10	-1	80855193	609
ENSMUSG00000028409	protein_coding	Smu1	ENSMUST00000130503	processed_transcript		4	-1	40757883	1523
ENSMUSG00000035215	protein_coding	Lsm7	ENSMUST00000217781	processed_transcript		10	-1	80855023	646
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000106998	protein_coding	alternative2	7	1	101663705	2287
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000142803	retained_intron		7	1	101663757	2171
ENSMUSG00000035215	protein_coding	Lsm7	ENSMUST00000219421	processed_transcript		10	-1	80855156	435
ENSMUSG00000028409	protein_coding	Smu1	ENSMUST00000150574	processed_transcript		4	-1	40757831	551
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000209579	protein_coding	alternative2	7	1	101663773	4159
ENSMUSG00000035215	protein_coding	Lsm7	ENSMUST00000217921	processed_transcript		10	-1	80855143	768
ENSMUSG00000028409	protein_coding	Smu1	ENSMUST00000137415	processed_transcript		4	-1	40757398	260
ENSMUSG00000082305	transcribed_unprocessed_pseudogene	Gm2420	ENSMUST00000202748	processed_transcript		5	1	32720330	447
ENSMUSG00000035215	protein_coding	Lsm7	ENSMUST00000218931	retained_intron		10	-1	80855193	785
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000123870	nonsense_mediated_decay		7	1	101663775	732
ENSMUSG00000038646	protein_coding	Ramac	ENSMUST00000042166	protein_coding	principal1	7	1	81762925	1452
ENSMUSG00000082305	transcribed_unprocessed_pseudogene	Gm2420	ENSMUST00000119864	transcribed_unprocessed_pseudogene		5	1	32720391	2149
ENSMUSG00000037652	protein_coding	Phc3	ENSMUST00000046624	nonsense_mediated_decay		3	-1	30969405	3491
ENSMUSG00000082305	transcribed_unprocessed_pseudogene	Gm2420	ENSMUST00000202224	transcribed_unprocessed_pseudogene		5	1	32720391	2249
ENSMUSG00000095300	protein_coding	Gm906	ENSMUST00000099521	protein_coding	principal1	13	-1	50250308	3152
ENSMUSG00000038646	protein_coding	Ramac	ENSMUST00000133034	protein_coding		7	1	81763050	347
ENSMUSG00000081112	processed_pseudogene	Gm12140	ENSMUST00000121214	processed_pseudogene		11	1	41378078	544
ENSMUSG00000038646	protein_coding	Ramac	ENSMUST00000118190	protein_coding	principal1	7	1	81763283	1391
ENSMUSG00000081152	processed_pseudogene	Gm12430	ENSMUST00000121539	processed_pseudogene		4	1	47453632	1322
ENSMUSG00000079542	IG_V_pseudogene	Gm42606	ENSMUST00000114209	IG_V_pseudogene		6	1	69661094	239
ENSMUSG00000108157	unprocessed_pseudogene	Olrf445-ps1	ENSMUST00000204960	unprocessed_pseudogene		6	1	42934594	314
ENSMUSG00000110228	processed_pseudogene	Gm2080	ENSMUST00000211299	processed_pseudogene		8	1	40724832	1573
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000148471	processed_transcript		7	1	13277283	3205
ENSMUSG00000058809	processed_pseudogene	Hspd1-ps3	ENSMUST00000119713	processed_pseudogene		11	1	41498737	1722
ENSMUSG00000110370	processed_pseudogene	Gm5749	ENSMUST00000210673	processed_pseudogene		8	-1	40749092	1090
ENSMUSG00000094993	IG_V_gene	Igkv4-51	ENSMUST00000103345	IG_V_gene	principal1	6	-1	69681975	394
ENSMUSG00000073110	protein_coding	Olfr444	ENSMUST00000204092	protein_coding	principal1	6	1	42949067	1472
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000150355	retained_intron		7	1	101663776	2199
ENSMUSG00000037652	protein_coding	Phc3	ENSMUST00000108255	protein_coding	alternative2	3	-1	30969405	3468
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000147439	processed_transcript		7	1	101682116	630
ENSMUSG00000029020	protein_coding	Mfn2	ENSMUST00000105716	protein_coding	principal1	4	-1	147904687	4241
ENSMUSG00000073110	protein_coding	Olfr444	ENSMUST00000095955	protein_coding	principal1	6	1	42955459	1050
ENSMUSG00000114035	lincRNA	Gm31126	ENSMUST00000222366	lincRNA		13	1	50267976	533
ENSMUSG00000053329	protein_coding	Gatd3a	ENSMUST00000001242	protein_coding	principal1	10	-1	78169782	1378
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000153473	processed_transcript		7	1	101683197	452
ENSMUSG00000044243	protein_coding	Bhlha9	ENSMUST00000056184	protein_coding	principal1	11	1	76672470	1207
ENSMUSG00000081847	processed_pseudogene	Gm12142	ENSMUST00000117114	processed_pseudogene		11	1	41591122	485
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000136193	retained_intron		7	1	101763579	702
ENSMUSG00000029020	protein_coding	Mfn2	ENSMUST00000030884	protein_coding	principal1	4	-1	147904704	4341
ENSMUSG00000063932	protein_coding	Poteg	ENSMUST00000081321	protein_coding	principal1	8	1	27447670	1706
ENSMUSG00000053329	protein_coding	Gatd3a	ENSMUST00000220359	protein_coding		10	-1	78167442	1620
ENSMUSG00000037652	protein_coding	Phc3	ENSMUST00000152357	nonsense_mediated_decay		3	-1	30969405	3155
ENSMUSG00000053329	protein_coding	Gatd3a	ENSMUST00000219120	protein_coding		10	-1	78169774	632
ENSMUSG00000001829	protein_coding	Clpb	ENSMUST00000150832	processed_transcript		7	1	101763606	739
ENSMUSG00000029020	protein_coding	Mfn2	ENSMUST00000105715	protein_coding	principal1	4	-1	147904698	4043
ENSMUSG00000053329	protein_coding	Gatd3a	ENSMUST00000219504	retained_intron		10	-1	78169074	705
ENSMUSG00000071937	protein_coding	Adam25	ENSMUST00000096663	protein_coding	principal1	8	1	40752208	2621
ENSMUSG00000029020	protein_coding	Mfn2	ENSMUST00000105714	protein_coding		4	-1	147904698	2427
ENSMUSG00000039740	protein_coding	Alg2	ENSMUST00000136912	processed_transcript		4	-1	47470770	810
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000107812	protein_coding	principal1	3	-1	69004543	4063
ENSMUSG00000053329	protein_coding	Gatd3a	ENSMUST00000218286	retained_intron		10	-1	78169736	568
ENSMUSG00000113730	lincRNA	Gm47805	ENSMUST00000221956	lincRNA		13	1	44622182	440
ENSMUSG00000029020	protein_coding	Mfn2	ENSMUST00000124646	processed_transcript		4	-1	147887523	447
ENSMUSG00000029020	protein_coding	Mfn2	ENSMUST00000134172	protein_coding		4	-1	147903395	685
ENSMUSG00000029020	protein_coding	Mfn2	ENSMUST00000150881	protein_coding		4	-1	147904658	708
ENSMUSG00000039740	protein_coding	Alg2	ENSMUST00000044148	protein_coding	principal1	4	-1	47474333	3021
ENSMUSG00000039740	protein_coding	Alg2	ENSMUST00000143104	protein_coding		4	-1	47473977	531
ENSMUSG00000046275	protein_coding	Trarg1	ENSMUST00000062024	protein_coding	principal1	11	1	76679808	3302
ENSMUSG00000101136	antisense	Gm8739	ENSMUST00000185962	antisense		13	-1	50491741	181
ENSMUSG00000100230	processed_pseudogene	Gm28650	ENSMUST00000188413	processed_pseudogene		1	1	52756719	411
ENSMUSG00000114559	protein_coding	Gm47429	ENSMUST00000225905	protein_coding	principal1	13	-1	50443912	505
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000147781	nonsense_mediated_decay		11	1	119603698	6138
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000127899	retained_intron		11	1	119655944	2805
ENSMUSG00000098234	lincRNA	Snhg6	ENSMUST00000182580	lincRNA		1	-1	9944118	473
ENSMUSG00000058470	protein_coding	Gm8369	ENSMUST00000189635	processed_transcript		19	1	11485938	617
ENSMUSG00000037652	protein_coding	Phc3	ENSMUST00000064718	protein_coding	alternative2	3	-1	30969399	2893
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000139728	nonsense_mediated_decay		11	1	119798773	688
ENSMUSG00000058470	protein_coding	Gm8369	ENSMUST00000190498	processed_transcript		19	1	11486040	556
ENSMUSG00000058470	protein_coding	Gm8369	ENSMUST00000185867	retained_intron		19	1	11486109	957
ENSMUSG00000037652	protein_coding	Phc3	ENSMUST00000124472	retained_intron		3	-1	30933111	2958
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000126802	retained_intron		11	1	119811246	3247
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000124401	protein_coding		11	1	119822947	515
ENSMUSG00000027329	protein_coding	Spef1	ENSMUST00000028801	protein_coding	principal1	2	-1	131187282	2328
ENSMUSG00000098234	lincRNA	Snhg6	ENSMUST00000182819	lincRNA		1	-1	9943223	816
ENSMUSG00000037652	protein_coding	Phc3	ENSMUST00000099163	protein_coding		3	-1	30969415	2808
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000136662	nonsense_mediated_decay		11	1	119856259	2355
ENSMUSG00000037652	protein_coding	Phc3	ENSMUST00000150939	retained_intron		3	-1	30965935	3660
ENSMUSG00000030137	protein_coding	Tuba8	ENSMUST00000032233	protein_coding	principal1	6	1	121210696	2263
ENSMUSG00000071909	protein_coding	Nutm2	ENSMUST00000096633	protein_coding	principal1	13	1	50467307	2548
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000148860	retained_intron		11	1	119856309	566
ENSMUSG00000025583	protein_coding	Rptor	ENSMUST00000131217	nonsense_mediated_decay		11	1	119857444	627
ENSMUSG00000058470	protein_coding	Gm8369	ENSMUST00000186423	nonsense_mediated_decay		19	1	11492038	638
ENSMUSG00000061603	protein_coding	Akap6	ENSMUST00000095737	protein_coding	principal2	12	1	52699383	14847
ENSMUSG00000098234	lincRNA	Snhg6	ENSMUST00000182043	lincRNA		1	-1	9942897	655
ENSMUSG00000030339	protein_coding	Ltbr	ENSMUST00000032489	protein_coding	principal1	6	-1	125313885	2107
ENSMUSG00000098234	lincRNA	Snhg6	ENSMUST00000182498	lincRNA		1	-1	9944103	559
ENSMUSG00000027329	protein_coding	Spef1	ENSMUST00000110218	protein_coding	principal1	2	-1	131175201	2600
ENSMUSG00000086527	antisense	Gm15856	ENSMUST00000124853	antisense		6	-1	121226153	1162
ENSMUSG00000058470	protein_coding	Gm8369	ENSMUST00000191475	retained_intron		19	1	11492050	3637
ENSMUSG00000037652	protein_coding	Phc3	ENSMUST00000177992	protein_coding	alternative2	3	-1	30969399	2920
ENSMUSG00000030339	protein_coding	Ltbr	ENSMUST00000161891	retained_intron		6	-1	125309565	215
ENSMUSG00000085081	antisense	Rptoros	ENSMUST00000127450	antisense		11	-1	119834365	1174
ENSMUSG00000061603	protein_coding	Akap6	ENSMUST00000219786	protein_coding	alternative2	12	1	52795836	4564
ENSMUSG00000037652	protein_coding	Phc3	ENSMUST00000129817	protein_coding	principal3	3	-1	30969399	3019
ENSMUSG00000048899	protein_coding	Rimkla	ENSMUST00000049994	protein_coding	principal1	4	-1	119492628	4097
ENSMUSG00000030339	protein_coding	Ltbr	ENSMUST00000160901	retained_intron		6	-1	125313265	450
ENSMUSG00000098234	lincRNA	Snhg6	ENSMUST00000182742	lincRNA		1	-1	9944117	400
ENSMUSG00000083870	processed_pseudogene	Gm11761	ENSMUST00000121392	processed_pseudogene		11	-1	119646630	445
ENSMUSG00000027329	protein_coding	Spef1	ENSMUST00000127987	protein_coding		2	-1	131174653	681
ENSMUSG00000063428	protein_coding	Ddo	ENSMUST00000019977	protein_coding	principal1	10	1	40630011	3000
ENSMUSG00000095917	protein_coding	Olfr740	ENSMUST00000214792	protein_coding	principal1	14	1	50445545	4103
ENSMUSG00000102369	TEC	9530022L04Rik	ENSMUST00000194340	TEC		3	-1	30957638	310
ENSMUSG00000087405	antisense	Gm14232	ENSMUST00000137176	antisense		2	1	131159537	446
ENSMUSG00000040651	protein_coding	Tasor	ENSMUST00000022450	protein_coding	principal1	14	1	27428834	7590
ENSMUSG00000095917	protein_coding	Olfr740	ENSMUST00000089838	protein_coding	principal1	14	1	50453054	936
ENSMUSG00000097945	processed_pseudogene	Gm17799	ENSMUST00000183270	processed_pseudogene		16	1	19723312	667
ENSMUSG00000058470	protein_coding	Gm8369	ENSMUST00000188633	protein_coding	principal1	19	1	11502208	1227
ENSMUSG00000063428	protein_coding	Ddo	ENSMUST00000214102	protein_coding		10	1	40630020	792
ENSMUSG00000058470	protein_coding	Gm8369	ENSMUST00000079855	protein_coding	principal1	19	1	11492038	1374
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000136448	retained_intron		3	-1	69004559	7616
ENSMUSG00000063428	protein_coding	Ddo	ENSMUST00000213503	protein_coding		10	1	40630024	1759
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000136176	retained_intron		3	-1	68920105	2860
ENSMUSG00000040651	protein_coding	Tasor	ENSMUST00000223970	processed_transcript		14	1	27437731	4677
ENSMUSG00000040651	protein_coding	Tasor	ENSMUST00000223688	processed_transcript		14	1	27463873	2344
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000176189	retained_intron		3	-1	68915115	241
ENSMUSG00000048899	protein_coding	Rimkla	ENSMUST00000126728	processed_transcript		4	-1	119492509	562
ENSMUSG00000095765	protein_coding	Olfr741	ENSMUST00000213903	protein_coding	principal1	14	1	50472738	3305
ENSMUSG00000040651	protein_coding	Tasor	ENSMUST00000225139	protein_coding		14	1	27477170	3038
ENSMUSG00000024991	protein_coding	Eif3a	ENSMUST00000025955	protein_coding	principal1	19	-1	60790643	5125
ENSMUSG00000063428	protein_coding	Ddo	ENSMUST00000213856	nonsense_mediated_decay		10	1	40630043	3117
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000152502	retained_intron		3	-1	69004498	2608
ENSMUSG00000095765	protein_coding	Olfr741	ENSMUST00000205518	protein_coding	principal1	14	1	50472738	3406
ENSMUSG00000041617	protein_coding	Ccdc74a	ENSMUST00000182822	retained_intron		16	1	17646470	1040
ENSMUSG00000063428	protein_coding	Ddo	ENSMUST00000213442	protein_coding		10	1	40630046	2408
ENSMUSG00000095765	protein_coding	Olfr741	ENSMUST00000071932	protein_coding	principal1	14	1	50485460	936
ENSMUSG00000091386	transcribed_unprocessed_pseudogene	Olfr443-ps1	ENSMUST00000204422	processed_transcript		6	1	43067308	1617
ENSMUSG00000024991	protein_coding	Eif3a	ENSMUST00000238125	protein_coding		19	-1	60782190	826
ENSMUSG00000003119	protein_coding	Cdk12	ENSMUST00000107539	protein_coding	alternative2	11	1	98203059	5912
ENSMUSG00000068267	protein_coding	Cenpb	ENSMUST00000089510	protein_coding	principal1	2	-1	131180067	4886
ENSMUSG00000063428	protein_coding	Ddo	ENSMUST00000216830	protein_coding		10	1	40630077	806
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000176754	processed_transcript		3	-1	68973745	525
ENSMUSG00000058046	protein_coding	4933430I17Rik	ENSMUST00000062145	protein_coding	principal1	4	1	62525369	1783
ENSMUSG00000091386	transcribed_unprocessed_pseudogene	Olfr443-ps1	ENSMUST00000163240	transcribed_unprocessed_pseudogene		6	1	43094435	915
ENSMUSG00000024991	protein_coding	Eif3a	ENSMUST00000237319	processed_transcript		19	-1	60772151	525
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000154741	protein_coding		3	-1	69004477	755
ENSMUSG00000019797	protein_coding	Mtres1	ENSMUST00000147196	protein_coding	principal1	10	-1	43540968	860
ENSMUSG00000068431	protein_coding	Olfr742	ENSMUST00000217437	protein_coding	principal1	14	1	50503600	2244
ENSMUSG00000063428	protein_coding	Ddo	ENSMUST00000214618	retained_intron		10	1	40631604	726
ENSMUSG00000068431	protein_coding	Olfr742	ENSMUST00000213935	protein_coding	principal1	14	1	50503626	2117
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000148031	protein_coding		3	-1	69004484	741
ENSMUSG00000019797	protein_coding	Mtres1	ENSMUST00000152926	processed_transcript		10	-1	43525843	392
ENSMUSG00000019797	protein_coding	Mtres1	ENSMUST00000126463	processed_transcript		10	-1	43540994	357
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000176135	processed_transcript		3	-1	69004388	653
ENSMUSG00000024991	protein_coding	Eif3a	ENSMUST00000235706	retained_intron		19	-1	60790658	2282
ENSMUSG00000019797	protein_coding	Mtres1	ENSMUST00000214198	TEC		10	-1	43540966	2842
ENSMUSG00000094721	protein_coding	Olfr1462	ENSMUST00000208533	protein_coding	principal1	19	1	13185734	3424
ENSMUSG00000068431	protein_coding	Olfr742	ENSMUST00000089836	protein_coding	principal1	14	1	50515121	1120
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000192467	retained_intron		3	-1	69004525	2231
ENSMUSG00000024991	protein_coding	Eif3a	ENSMUST00000236622	retained_intron		19	-1	60790658	3085
ENSMUSG00000003119	protein_coding	Cdk12	ENSMUST00000003203	protein_coding	principal3	11	1	98203314	4837
ENSMUSG00000111368	lincRNA	Gm47889	ENSMUST00000216546	lincRNA		10	1	43518571	910
ENSMUSG00000094721	protein_coding	Olfr1462	ENSMUST00000076832	protein_coding	principal1	19	1	13190669	924
ENSMUSG00000021301	protein_coding	Hecw1	ENSMUST00000110516	protein_coding	principal1	13	-1	14523226	9460
ENSMUSG00000104163	processed_pseudogene	Gm19057	ENSMUST00000194329	processed_pseudogene		1	-1	161299014	1197
ENSMUSG00000045886	protein_coding	Gm9803	ENSMUST00000057649	protein_coding	principal1	10	1	43524084	563
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000029347	protein_coding	principal1	3	-1	68994537	3880
ENSMUSG00000021301	protein_coding	Hecw1	ENSMUST00000220718	protein_coding		13	-1	14317166	6124
ENSMUSG00000045886	protein_coding	Gm9803	ENSMUST00000216543	protein_coding		10	1	43524106	456
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000112484	protein_coding	principal3	6	-1	124733154	2219
ENSMUSG00000003119	protein_coding	Cdk12	ENSMUST00000107538	protein_coding	alternative2	11	1	98203335	5143
ENSMUSG00000070806	protein_coding	Zmynd12	ENSMUST00000094819	protein_coding	principal1	4	1	119422814	1464
ENSMUSG00000027778	protein_coding	Ift80	ENSMUST00000169064	protein_coding	principal1	3	-1	69004570	4064
ENSMUSG00000087306	processed_transcript	A230004M16Rik	ENSMUST00000139508	processed_transcript		11	1	41962892	4468
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000004377	protein_coding	alternative1	6	-1	124738625	2308
ENSMUSG00000103007	processed_pseudogene	Gm20690	ENSMUST00000195126	processed_pseudogene		3	1	68901807	355
ENSMUSG00000111756	TEC	Gm48183	ENSMUST00000217619	TEC		3	-1	68917323	825
ENSMUSG00000093730	processed_pseudogene	Gm20690	ENSMUST00000177341	processed_pseudogene		3	1	68901830	315
ENSMUSG00000070806	protein_coding	Zmynd12	ENSMUST00000129150	processed_transcript		4	1	119444720	674
ENSMUSG00000093505	processed_pseudogene	Gm20691	ENSMUST00000176889	processed_pseudogene		3	-1	68904152	333
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000021547	protein_coding	principal1	12	-1	79296304	9391
ENSMUSG00000070806	protein_coding	Zmynd12	ENSMUST00000134147	processed_transcript		4	1	119422872	596
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000171549	protein_coding	alternative1	6	-1	124738714	2226
ENSMUSG00000021301	protein_coding	Hecw1	ENSMUST00000222241	retained_intron		13	-1	14318957	3696
ENSMUSG00000087306	processed_transcript	A230004M16Rik	ENSMUST00000125365	processed_transcript		11	1	41884466	2016
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000218377	protein_coding		12	-1	79296282	2726
ENSMUSG00000026700	protein_coding	Tnfsf4	ENSMUST00000028024	protein_coding	principal1	1	1	161395409	1842
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000218433	retained_intron		12	-1	79236673	655
ENSMUSG00000046750	protein_coding	Selenov	ENSMUST00000056589	protein_coding	principal1	7	-1	28291186	1267
ENSMUSG00000087306	processed_transcript	A230004M16Rik	ENSMUST00000155032	processed_transcript		11	1	41710342	1967
ENSMUSG00000003119	protein_coding	Cdk12	ENSMUST00000145113	processed_transcript		11	1	98220401	3648
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000219105	retained_intron		12	-1	79237384	584
ENSMUSG00000060491	protein_coding	4930522H14Rik	ENSMUST00000102725	protein_coding	principal3	4	-1	109531297	854
ENSMUSG00000037355	protein_coding	Uvssa	ENSMUST00000200682	retained_intron		5	1	33378549	3238
ENSMUSG00000094285	protein_coding	Olfr743	ENSMUST00000215793	protein_coding	principal1	14	1	50521839	2203
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000218447	retained_intron		12	-1	79236673	499
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000173315	protein_coding		6	-1	124721842	456
ENSMUSG00000046750	protein_coding	Selenov	ENSMUST00000156408	protein_coding		7	-1	28288182	383
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000174265	protein_coding		6	-1	124738584	1743
ENSMUSG00000060491	protein_coding	4930522H14Rik	ENSMUST00000082306	protein_coding	alternative2	4	-1	109531204	849
ENSMUSG00000094285	protein_coding	Olfr743	ENSMUST00000071294	protein_coding	principal1	14	1	50533414	936
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000172690	protein_coding		6	-1	124727461	134
ENSMUSG00000115034	processed_pseudogene	Gm19109	ENSMUST00000227085	processed_pseudogene		14	1	50552868	961
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000174787	protein_coding		6	-1	124727411	120
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000026558	protein_coding	principal1	7	1	140856957	3406
ENSMUSG00000003119	protein_coding	Cdk12	ENSMUST00000147441	processed_transcript		11	1	98241737	2605
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000172613	retained_intron		6	-1	124728708	421
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000151384	retained_intron		7	1	140857315	939
ENSMUSG00000041617	protein_coding	Ccdc74a	ENSMUST00000182368	nonsense_mediated_decay		16	1	17646475	1064
ENSMUSG00000053815	protein_coding	Olfr744	ENSMUST00000216690	protein_coding	principal1	14	1	50614903	1765
ENSMUSG00000028410	protein_coding	Dnaja1	ENSMUST00000030118	protein_coding	principal1	4	1	40722480	3376
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000173228	processed_transcript		6	-1	124732771	198
ENSMUSG00000003119	protein_coding	Cdk12	ENSMUST00000125152	processed_transcript		11	1	98263502	443
ENSMUSG00000053815	protein_coding	Olfr744	ENSMUST00000213668	protein_coding	principal1	14	1	50614879	2583
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000153498	processed_transcript		7	1	140857422	829
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000173647	protein_coding		6	-1	124733082	330
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000220092	retained_intron		12	-1	79261591	3782
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000046974	protein_coding	principal1	13	1	50417864	1798
ENSMUSG00000004266	protein_coding	Ptpn6	ENSMUST00000172770	retained_intron		6	-1	124733110	371
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000139956	processed_transcript		7	1	140857442	796
ENSMUSG00000053815	protein_coding	Olfr744	ENSMUST00000066457	protein_coding	principal1	14	1	50618161	1105
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000220003	retained_intron		12	-1	79240322	737
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000220390	processed_transcript		12	-1	79244411	552
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000176913	nonsense_mediated_decay		13	1	50417881	676
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000219912	protein_coding		12	-1	79268413	2062
ENSMUSG00000089932	processed_pseudogene	Gm16114	ENSMUST00000161930	processed_pseudogene		3	-1	40659166	300
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000217723	retained_intron		12	-1	79258022	626
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000220262	retained_intron		12	-1	79268359	655
ENSMUSG00000021301	protein_coding	Hecw1	ENSMUST00000221863	retained_intron		13	-1	14523228	3372
ENSMUSG00000056947	protein_coding	Mab21l1	ENSMUST00000075422	protein_coding	principal1	3	1	55782510	2492
ENSMUSG00000024831	protein_coding	Ighmbp2	ENSMUST00000025751	protein_coding	principal2	19	-1	3283017	5569
ENSMUSG00000060798	protein_coding	Intu	ENSMUST00000061590	protein_coding	alternative2	3	1	40531286	1589
ENSMUSG00000021301	protein_coding	Hecw1	ENSMUST00000223317	retained_intron		13	-1	14523161	1864
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000176424	processed_transcript		13	1	50417886	879
ENSMUSG00000106211	TEC	Gm42842	ENSMUST00000197736	TEC		3	-1	56126159	3004
ENSMUSG00000046101	protein_coding	Mcmdc2	ENSMUST00000052843	protein_coding		1	1	9908638	2826
ENSMUSG00000021301	protein_coding	Hecw1	ENSMUST00000222904	retained_intron		13	-1	14523105	1357
ENSMUSG00000024831	protein_coding	Ighmbp2	ENSMUST00000119292	protein_coding	alternative2	19	-1	3282979	3513
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000072376	protein_coding	principal1	18	1	38296635	3040
ENSMUSG00000021301	protein_coding	Hecw1	ENSMUST00000223189	protein_coding		13	-1	14523105	650
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000026135	protein_coding	principal1	11	1	120672992	1820
ENSMUSG00000028410	protein_coding	Dnaja1	ENSMUST00000129204	processed_transcript		4	1	40722922	4119
ENSMUSG00000021301	protein_coding	Hecw1	ENSMUST00000221274	protein_coding		13	-1	14521575	404
ENSMUSG00000021301	protein_coding	Hecw1	ENSMUST00000223550	protein_coding		13	-1	14521852	523
ENSMUSG00000028410	protein_coding	Dnaja1	ENSMUST00000139406	processed_transcript		4	1	40722150	379
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000238031	retained_intron		18	1	38296670	796
ENSMUSG00000028410	protein_coding	Dnaja1	ENSMUST00000137246	protein_coding		4	1	40722930	916
ENSMUSG00000021301	protein_coding	Hecw1	ENSMUST00000223283	retained_intron		13	-1	14523150	2554
ENSMUSG00000024892	protein_coding	Pcx	ENSMUST00000224726	protein_coding	principal3	19	1	4510486	4061
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000210708	nonsense_mediated_decay		7	1	140857451	2577
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000171700	retained_intron		11	1	120673026	2061
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000219842	retained_intron		12	-1	79296272	4831
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000210601	retained_intron		7	1	140857485	3374
ENSMUSG00000024892	protein_coding	Pcx	ENSMUST00000223659	processed_transcript		19	1	4510526	275
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000218510	retained_intron		12	-1	79296301	4255
ENSMUSG00000066755	protein_coding	Tnfsf18	ENSMUST00000086084	protein_coding	principal1	1	1	161494655	2066
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000176479	nonsense_mediated_decay		13	1	50417886	2316
ENSMUSG00000028410	protein_coding	Dnaja1	ENSMUST00000126020	processed_transcript		4	1	40723362	622
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000237903	protein_coding		18	1	38296678	662
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000123925	retained_intron		7	1	140857699	2272
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000236116	protein_coding	principal1	18	1	38296678	2410
ENSMUSG00000066440	protein_coding	Zfyve26	ENSMUST00000219571	retained_intron		12	-1	79296278	824
ENSMUSG00000028410	protein_coding	Dnaja1	ENSMUST00000149794	protein_coding		4	1	40723117	533
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000147815	retained_intron		7	1	140858162	799
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000209766	protein_coding		7	1	140858555	1942
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000131850	retained_intron		7	1	140860642	2151
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000177245	retained_intron		13	1	50417895	533
ENSMUSG00000046598	protein_coding	Bdh1	ENSMUST00000089759	protein_coding	principal1	16	1	31422280	1711
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000176976	processed_transcript		13	1	50423855	454
ENSMUSG00000025485	protein_coding	Ric8a	ENSMUST00000152212	retained_intron		7	1	140861173	697
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000176508	retained_intron		13	1	50429970	839
ENSMUSG00000028410	protein_coding	Dnaja1	ENSMUST00000137476	processed_transcript		4	1	40722559	571
ENSMUSG00000024831	protein_coding	Ighmbp2	ENSMUST00000154537	nonsense_mediated_decay		19	-1	3282980	2697
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000177541	retained_intron		13	1	50431121	1914
ENSMUSG00000050028	protein_coding	Olfr745	ENSMUST00000216105	processed_transcript		14	1	50639388	1884
ENSMUSG00000050028	protein_coding	Olfr745	ENSMUST00000213127	protein_coding		14	1	50639388	1930
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000176470	retained_intron		13	1	50431171	856
ENSMUSG00000028410	protein_coding	Dnaja1	ENSMUST00000148976	processed_transcript		4	1	40724049	1130
ENSMUSG00000024831	protein_coding	Ighmbp2	ENSMUST00000143079	retained_intron		19	-1	3267716	901
ENSMUSG00000003518	protein_coding	Dusp3	ENSMUST00000151678	protein_coding		11	-1	101983503	4084
ENSMUSG00000046598	protein_coding	Bdh1	ENSMUST00000115227	protein_coding	principal1	16	1	31428748	3122
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000177233	retained_intron		13	1	50431357	458
ENSMUSG00000024892	protein_coding	Pcx	ENSMUST00000225189	protein_coding		19	1	4515654	595
ENSMUSG00000069769	protein_coding	Msi2	ENSMUST00000107909	protein_coding	alternative2	11	-1	88718229	6436
ENSMUSG00000050028	protein_coding	Olfr745	ENSMUST00000062534	protein_coding	principal1	14	1	50642195	1175
ENSMUSG00000028410	protein_coding	Dnaja1	ENSMUST00000125442	protein_coding		4	1	40722945	826
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000176298	retained_intron		13	1	50431676	253
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000236353	processed_transcript		18	1	38296681	743
ENSMUSG00000107985	lincRNA	Gm35037	ENSMUST00000203144	lincRNA		7	1	3451357	506
ENSMUSG00000046101	protein_coding	Mcmdc2	ENSMUST00000125294	protein_coding		1	1	9908668	2003
ENSMUSG00000028410	protein_coding	Dnaja1	ENSMUST00000164233	protein_coding	principal1	4	1	40722922	5622
ENSMUSG00000046598	protein_coding	Bdh1	ENSMUST00000128286	retained_intron		16	1	31428752	438
ENSMUSG00000024892	protein_coding	Pcx	ENSMUST00000236457	protein_coding		19	1	4558810	393
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000237824	protein_coding		18	1	38296684	530
ENSMUSG00000102860	TEC	Gm37638	ENSMUST00000194337	TEC		1	1	161713705	1123
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000176772	protein_coding		13	1	50431711	731
ENSMUSG00000046598	protein_coding	Bdh1	ENSMUST00000232433	nonsense_mediated_decay		16	1	31428792	3162
ENSMUSG00000046101	protein_coding	Mcmdc2	ENSMUST00000140948	protein_coding		1	1	9908670	3249
ENSMUSG00000028252	protein_coding	Ccnc	ENSMUST00000065928	protein_coding	alternative1	4	1	21727701	3484
ENSMUSG00000037816	protein_coding	Fbxw17	ENSMUST00000176543	protein_coding		13	1	50432185	698
ENSMUSG00000027327	protein_coding	1700037H04Rik	ENSMUST00000184535	nonsense_mediated_decay		2	-1	131160034	1358
ENSMUSG00000084009	unprocessed_pseudogene	Rhox7-ps1	ENSMUST00000117595	unprocessed_pseudogene		X	1	38296868	806
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000236982	protein_coding		18	1	38296685	776
ENSMUSG00000046101	protein_coding	Mcmdc2	ENSMUST00000118098	protein_coding		1	1	9911314	2072
ENSMUSG00000106298	IG_V_pseudogene	Gm42958	ENSMUST00000197595	IG_V_pseudogene		6	1	69693295	318
ENSMUSG00000027327	protein_coding	1700037H04Rik	ENSMUST00000136838	retained_intron		2	-1	131149028	1647
ENSMUSG00000041617	protein_coding	Ccdc74a	ENSMUST00000056962	protein_coding	principal1	16	1	17646475	1273
ENSMUSG00000069769	protein_coding	Msi2	ENSMUST00000092794	protein_coding	principal2	11	-1	88718101	1855
ENSMUSG00000024892	protein_coding	Pcx	ENSMUST00000113825	protein_coding	principal3	19	1	4594346	4044
ENSMUSG00000110032	processed_pseudogene	Gm8436	ENSMUST00000210152	processed_pseudogene		8	-1	40790136	1080
ENSMUSG00000046598	protein_coding	Bdh1	ENSMUST00000115226	protein_coding	principal1	16	1	31429299	1496
ENSMUSG00000091519	protein_coding	Skor2	ENSMUST00000166956	protein_coding	principal1	18	1	76856405	3141
ENSMUSG00000046101	protein_coding	Mcmdc2	ENSMUST00000183059	nonsense_mediated_decay		1	1	9932120	749
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000235549	protein_coding		18	1	38296689	717
ENSMUSG00000041617	protein_coding	Ccdc74a	ENSMUST00000183101	retained_intron		16	1	17646551	685
ENSMUSG00000046101	protein_coding	Mcmdc2	ENSMUST00000171802	protein_coding	principal1	1	1	9908638	2553
ENSMUSG00000069769	protein_coding	Msi2	ENSMUST00000148013	retained_intron		11	-1	88590147	1748
ENSMUSG00000024892	protein_coding	Pcx	ENSMUST00000238089	protein_coding		19	1	4594408	414
ENSMUSG00000094483	protein_coding	Purb	ENSMUST00000179343	protein_coding	principal1	11	-1	6475917	8319
ENSMUSG00000046598	protein_coding	Bdh1	ENSMUST00000149039	protein_coding		16	1	31436091	807
ENSMUSG00000046598	protein_coding	Bdh1	ENSMUST00000126825	processed_transcript		16	1	31458116	582
ENSMUSG00000069769	protein_coding	Msi2	ENSMUST00000138790	retained_intron		11	-1	88718110	2516
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000236690	processed_transcript		18	1	38296694	424
ENSMUSG00000086839	antisense	Gm11973	ENSMUST00000127488	antisense		11	1	6475425	468
ENSMUSG00000028252	protein_coding	Ccnc	ENSMUST00000102997	protein_coding	principal3	4	1	21727726	3365
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000236032	processed_transcript		18	1	38296694	778
ENSMUSG00000086645	antisense	Gm15743	ENSMUST00000129645	antisense		16	-1	31428291	242
ENSMUSG00000069769	protein_coding	Msi2	ENSMUST00000144699	protein_coding		11	-1	88718513	405
ENSMUSG00000040323	processed_pseudogene	Gm15429	ENSMUST00000151268	processed_pseudogene		1	-1	161727489	798
ENSMUSG00000028252	protein_coding	Ccnc	ENSMUST00000120679	protein_coding		4	1	21727726	1453
ENSMUSG00000086645	antisense	Gm15743	ENSMUST00000182690	antisense		16	-1	31429776	1901
ENSMUSG00000024892	protein_coding	Pcx	ENSMUST00000068004	protein_coding	alternative1	19	1	4510472	4148
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000236649	nonsense_mediated_decay		18	1	38296694	2822
ENSMUSG00000003518	protein_coding	Dusp3	ENSMUST00000003612	protein_coding	principal1	11	-1	101984799	4212
ENSMUSG00000104941	lincRNA	Gm8953	ENSMUST00000198497	lincRNA		5	-1	12355787	904
ENSMUSG00000041617	protein_coding	Ccdc74a	ENSMUST00000182117	protein_coding		16	1	17646564	776
ENSMUSG00000109787	TEC	Gm45286	ENSMUST00000209267	TEC		8	1	77574219	1350
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000237416	protein_coding		18	1	38296700	618
ENSMUSG00000051200	protein_coding	Olfr513	ENSMUST00000214670	protein_coding	principal1	7	1	108750973	2029
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000237089	protein_coding		18	1	38296706	364
ENSMUSG00000051200	protein_coding	Olfr513	ENSMUST00000055146	protein_coding	principal1	7	1	108754858	930
ENSMUSG00000041617	protein_coding	Ccdc74a	ENSMUST00000182976	nonsense_mediated_decay		16	1	17646565	444
ENSMUSG00000037134	protein_coding	Prmt9	ENSMUST00000142824	retained_intron		8	1	77549407	3888
ENSMUSG00000003518	protein_coding	Dusp3	ENSMUST00000107173	protein_coding		11	-1	101987013	4311
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000237211	protein_coding		18	1	38296776	864
ENSMUSG00000025481	protein_coding	Urah	ENSMUST00000106050	protein_coding	alternative2	7	1	140835018	719
ENSMUSG00000109207	processed_pseudogene	Gm45232	ENSMUST00000207811	processed_pseudogene		7	1	108795003	162
ENSMUSG00000086839	antisense	Gm11973	ENSMUST00000155498	antisense		11	1	6475465	867
ENSMUSG00000041617	protein_coding	Ccdc74a	ENSMUST00000182671	protein_coding		16	1	17646613	648
ENSMUSG00000086839	antisense	Gm11973	ENSMUST00000124274	antisense		11	1	6475477	540
ENSMUSG00000069769	protein_coding	Msi2	ENSMUST00000107908	protein_coding		11	-1	88718182	695
ENSMUSG00000041617	protein_coding	Ccdc74a	ENSMUST00000182344	protein_coding		16	1	17646618	409
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000171461	protein_coding	principal1	18	1	38296805	3340
ENSMUSG00000003518	protein_coding	Dusp3	ENSMUST00000107172	protein_coding	principal1	11	-1	101987013	4445
ENSMUSG00000054894	protein_coding	Dmac2l	ENSMUST00000220916	protein_coding	principal1	12	1	69724950	1599
ENSMUSG00000118644	unprocessed_pseudogene	AL592080.1	ENSMUST00000239393	unprocessed_pseudogene		11	1	62117419	133
ENSMUSG00000069769	protein_coding	Msi2	ENSMUST00000126293	processed_transcript		11	-1	88718212	684
ENSMUSG00000041617	protein_coding	Ccdc74a	ENSMUST00000182526	retained_intron		16	1	17646673	365
ENSMUSG00000027869	protein_coding	Hsd3b6	ENSMUST00000029463	protein_coding	principal1	3	-1	98814443	1802
ENSMUSG00000051721	protein_coding	Wdcp	ENSMUST00000220215	protein_coding	alternative2	12	1	4843303	2202
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000235811	protein_coding		18	1	38296820	740
ENSMUSG00000083212	processed_pseudogene	Gm12274	ENSMUST00000120062	processed_pseudogene		11	-1	61974350	385
ENSMUSG00000060798	protein_coding	Intu	ENSMUST00000091186	protein_coding	principal2	3	1	40540767	6387
ENSMUSG00000027869	protein_coding	Hsd3b6	ENSMUST00000196706	processed_transcript		3	-1	98814422	601
ENSMUSG00000041617	protein_coding	Ccdc74a	ENSMUST00000183279	nonsense_mediated_decay		16	1	17646700	698
ENSMUSG00000051721	protein_coding	Wdcp	ENSMUST00000223551	protein_coding	alternative2	12	1	4843303	4317
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000236319	protein_coding		18	1	38297031	684
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000046073	protein_coding	principal2	5	-1	122989099	5180
ENSMUSG00000084411	processed_pseudogene	Gm11510	ENSMUST00000120278	processed_pseudogene		11	-1	88433514	347
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000235491	protein_coding		18	1	38297152	767
ENSMUSG00000003518	protein_coding	Dusp3	ENSMUST00000125794	protein_coding		11	-1	101981688	440
ENSMUSG00000060798	protein_coding	Intu	ENSMUST00000204176	protein_coding	alternative2	3	1	40672621	774
ENSMUSG00000027869	protein_coding	Hsd3b6	ENSMUST00000170847	protein_coding	principal1	3	-1	98811108	1539
ENSMUSG00000054894	protein_coding	Dmac2l	ENSMUST00000021372	protein_coding	principal1	12	1	69724962	1485
ENSMUSG00000028252	protein_coding	Ccnc	ENSMUST00000133597	processed_transcript		4	1	21727741	1211
ENSMUSG00000108510	processed_pseudogene	Gm45192	ENSMUST00000206749	processed_pseudogene		14	-1	50645670	283
ENSMUSG00000051721	protein_coding	Wdcp	ENSMUST00000219069	processed_transcript		12	1	4843328	605
ENSMUSG00000003518	protein_coding	Dusp3	ENSMUST00000143177	protein_coding		11	-1	101984778	391
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000237667	nonsense_mediated_decay		18	1	38299752	674
ENSMUSG00000054894	protein_coding	Dmac2l	ENSMUST00000220539	protein_coding		12	1	69724968	334
ENSMUSG00000003518	protein_coding	Dusp3	ENSMUST00000176261	protein_coding		11	-1	101984751	496
ENSMUSG00000058188	protein_coding	Olfr746	ENSMUST00000218546	protein_coding	principal1	14	1	50647083	987
ENSMUSG00000054894	protein_coding	Dmac2l	ENSMUST00000220460	protein_coding		12	1	69724984	721
ENSMUSG00000051721	protein_coding	Wdcp	ENSMUST00000053034	protein_coding	principal3	12	1	4843347	2892
ENSMUSG00000058188	protein_coding	Olfr746	ENSMUST00000080616	protein_coding	principal1	14	1	50653239	945
ENSMUSG00000054894	protein_coding	Dmac2l	ENSMUST00000222950	protein_coding		12	1	69724990	599
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000031435	protein_coding		5	-1	122900355	3532
ENSMUSG00000027327	protein_coding	1700037H04Rik	ENSMUST00000103188	protein_coding	principal3	2	-1	131160020	1241
ENSMUSG00000025481	protein_coding	Urah	ENSMUST00000211372	protein_coding	principal3	7	1	140835272	688
ENSMUSG00000102399	processed_pseudogene	Gm5049	ENSMUST00000195878	processed_pseudogene		1	1	161746056	1590
ENSMUSG00000051721	protein_coding	Wdcp	ENSMUST00000220170	protein_coding		12	1	4843394	1950
ENSMUSG00000060450	protein_coding	Rnf14	ENSMUST00000170811	protein_coding		18	1	38296635	2886
ENSMUSG00000115323	processed_pseudogene	Gm18762	ENSMUST00000227826	processed_pseudogene		14	1	50670388	1847
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000201866	retained_intron		11	1	61956763	2182
ENSMUSG00000051721	protein_coding	Wdcp	ENSMUST00000085793	protein_coding	alternative2	12	1	4850146	1992
ENSMUSG00000027327	protein_coding	1700037H04Rik	ENSMUST00000184121	nonsense_mediated_decay		2	-1	131160024	874
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000118027	protein_coding		5	-1	122989306	5062
ENSMUSG00000100845	unprocessed_pseudogene	Gm28770	ENSMUST00000187354	unprocessed_pseudogene		Y	1	38747648	693
ENSMUSG00000025481	protein_coding	Urah	ENSMUST00000026554	protein_coding	principal3	7	1	140835279	890
ENSMUSG00000096275	unprocessed_pseudogene	Gm20901	ENSMUST00000180177	unprocessed_pseudogene		Y	-1	38799361	664
ENSMUSG00000046282	protein_coding	Adam20	ENSMUST00000056331	protein_coding	principal1	8	1	40793273	2589
ENSMUSG00000025481	protein_coding	Urah	ENSMUST00000185612	protein_coding	principal3	7	1	140835297	716
ENSMUSG00000027327	protein_coding	1700037H04Rik	ENSMUST00000028800	protein_coding	alternative1	2	-1	131160081	832
ENSMUSG00000025481	protein_coding	Urah	ENSMUST00000127986	retained_intron		7	1	140835334	740
ENSMUSG00000028252	protein_coding	Ccnc	ENSMUST00000123294	processed_transcript		4	1	21727753	1404
ENSMUSG00000025481	protein_coding	Urah	ENSMUST00000209978	protein_coding		7	1	140835624	466
ENSMUSG00000025481	protein_coding	Urah	ENSMUST00000210916	protein_coding		7	1	140835642	485
ENSMUSG00000076562	IG_V_gene	Igkv4-50	ENSMUST00000103363	IG_V_gene	principal1	6	-1	69701287	352
ENSMUSG00000078796	protein_coding	Zfp541	ENSMUST00000209369	protein_coding	principal2	7	1	16061814	4879
ENSMUSG00000030189	protein_coding	Ybx3	ENSMUST00000032309	protein_coding	principal4	6	-1	131388438	1853
ENSMUSG00000101771	lincRNA	Gm28176	ENSMUST00000185322	lincRNA		Y	-1	38874998	622
ENSMUSG00000101771	lincRNA	Gm28176	ENSMUST00000185740	lincRNA		Y	-1	38874998	437
ENSMUSG00000027327	protein_coding	1700037H04Rik	ENSMUST00000133602	protein_coding		2	-1	131160042	750
ENSMUSG00000078796	protein_coding	Zfp541	ENSMUST00000210805	protein_coding	alternative2	7	1	16071921	4084
ENSMUSG00000027327	protein_coding	1700037H04Rik	ENSMUST00000152961	processed_transcript		2	-1	131160042	360
ENSMUSG00000111175	processed_pseudogene	Gm19640	ENSMUST00000214849	processed_pseudogene		9	-1	30063719	464
ENSMUSG00000084408	processed_pseudogene	Gm11870	ENSMUST00000119255	processed_pseudogene		4	-1	16012326	1322
ENSMUSG00000111304	lincRNA	Gm47677	ENSMUST00000217527	lincRNA		9	1	30167575	290
ENSMUSG00000054033	protein_coding	Adam39	ENSMUST00000066814	protein_coding	principal1	8	1	40822990	2636
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000164034	protein_coding	principal1	10	1	69208552	2421
ENSMUSG00000030189	protein_coding	Ybx3	ENSMUST00000087865	protein_coding	alternative2	6	-1	131388476	1684
ENSMUSG00000028252	protein_coding	Ccnc	ENSMUST00000108240	protein_coding	alternative1	4	1	21727755	1406
ENSMUSG00000037134	protein_coding	Prmt9	ENSMUST00000118622	protein_coding	alternative2	8	1	77549410	2768
ENSMUSG00000019966	protein_coding	Kitl	ENSMUST00000105283	protein_coding	principal1	10	1	100015630	5648
ENSMUSG00000078796	protein_coding	Zfp541	ENSMUST00000108509	protein_coding	principal2	7	1	16071942	4561
ENSMUSG00000111109	bidirectional_promoter_lncRNA	Gm30933	ENSMUST00000217174	bidirectional_promoter_lncRNA		9	-1	30426976	381
ENSMUSG00000028252	protein_coding	Ccnc	ENSMUST00000145288	processed_transcript		4	1	21727758	445
ENSMUSG00000022696	protein_coding	Sidt1	ENSMUST00000127567	processed_transcript		16	-1	44269532	2901
ENSMUSG00000105725	IG_V_pseudogene	Igkv12-49	ENSMUST00000197714	IG_V_pseudogene		6	-1	69716956	278
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000146998	protein_coding		7	1	13278835	944
ENSMUSG00000030189	protein_coding	Ybx3	ENSMUST00000205035	processed_transcript		6	-1	131378241	838
ENSMUSG00000019966	protein_coding	Kitl	ENSMUST00000219050	processed_transcript		10	1	100015824	372
ENSMUSG00000019966	protein_coding	Kitl	ENSMUST00000130190	protein_coding		10	1	100015826	675
ENSMUSG00000059005	protein_coding	Hnrnpa3	ENSMUST00000111964	protein_coding	principal3	2	1	75659261	1654
ENSMUSG00000030189	protein_coding	Ybx3	ENSMUST00000203157	retained_intron		6	-1	131369018	1035
ENSMUSG00000028252	protein_coding	Ccnc	ENSMUST00000133712	processed_transcript		4	1	21727767	1247
ENSMUSG00000030189	protein_coding	Ybx3	ENSMUST00000204481	processed_transcript		6	-1	131378502	745
ENSMUSG00000010841	protein_coding	Cfap97d1	ENSMUST00000176722	protein_coding		11	1	101984279	608
ENSMUSG00000019966	protein_coding	Kitl	ENSMUST00000218200	protein_coding		10	1	100015827	564
ENSMUSG00000037134	protein_coding	Prmt9	ENSMUST00000210040	nonsense_mediated_decay		8	1	77549454	2688
ENSMUSG00000010841	protein_coding	Cfap97d1	ENSMUST00000175972	protein_coding		11	1	101984284	271
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000020101	protein_coding	principal1	10	1	69212634	4352
ENSMUSG00000037134	protein_coding	Prmt9	ENSMUST00000156753	retained_intron		8	1	77563662	561
ENSMUSG00000107832	processed_pseudogene	Gm18688	ENSMUST00000204695	processed_pseudogene		6	-1	131433911	1859
ENSMUSG00000059005	protein_coding	Hnrnpa3	ENSMUST00000111962	protein_coding	alternative2	2	1	75659267	5150
ENSMUSG00000028232	protein_coding	Tmem68	ENSMUST00000154922	nonsense_mediated_decay		4	-1	3574809	2773
ENSMUSG00000025484	protein_coding	Bet1l	ENSMUST00000026557	protein_coding	principal1	7	-1	140857109	2268
ENSMUSG00000020297	protein_coding	Nsg2	ENSMUST00000020537	protein_coding	principal1	11	1	32000463	2239
ENSMUSG00000059005	protein_coding	Hnrnpa3	ENSMUST00000132392	retained_intron		2	1	75659280	596
ENSMUSG00000037134	protein_coding	Prmt9	ENSMUST00000056237	protein_coding	principal2	8	1	77549397	2781
ENSMUSG00000059005	protein_coding	Hnrnpa3	ENSMUST00000111961	protein_coding	alternative2	2	1	75659280	1734
ENSMUSG00000117971	processed_pseudogene	Gm50220	ENSMUST00000237943	processed_pseudogene		18	1	65342821	524
ENSMUSG00000020297	protein_coding	Nsg2	ENSMUST00000109409	protein_coding		11	1	32000463	641
ENSMUSG00000025484	protein_coding	Bet1l	ENSMUST00000210195	retained_intron		7	-1	140856284	719
ENSMUSG00000059005	protein_coding	Hnrnpa3	ENSMUST00000141974	protein_coding		2	1	75662489	754
ENSMUSG00000040455	protein_coding	Usp45	ENSMUST00000156589	processed_transcript		4	1	21767156	446
ENSMUSG00000019966	protein_coding	Kitl	ENSMUST00000020129	protein_coding		10	1	100015916	1260
ENSMUSG00000020297	protein_coding	Nsg2	ENSMUST00000093219	protein_coding		11	1	32000502	1974
ENSMUSG00000029390	protein_coding	Tmed2	ENSMUST00000060226	protein_coding	principal1	5	1	124540695	2074
ENSMUSG00000059005	protein_coding	Hnrnpa3	ENSMUST00000164947	protein_coding	alternative2	2	1	75659318	1074
ENSMUSG00000111993	transcribed_unprocessed_pseudogene	Gm48018	ENSMUST00000219417	transcribed_unprocessed_pseudogene		10	1	33969983	550
ENSMUSG00000111993	transcribed_unprocessed_pseudogene	Gm48018	ENSMUST00000219391	processed_transcript		10	1	33972285	1382
ENSMUSG00000019966	protein_coding	Kitl	ENSMUST00000219881	retained_intron		10	1	100088056	1405
ENSMUSG00000112782	processed_pseudogene	Gm7940	ENSMUST00000218195	processed_pseudogene		10	-1	33973569	769
ENSMUSG00000059005	protein_coding	Hnrnpa3	ENSMUST00000090792	protein_coding	principal3	2	1	75659318	1140
ENSMUSG00000025484	protein_coding	Bet1l	ENSMUST00000211624	protein_coding		7	-1	140857362	769
ENSMUSG00000025484	protein_coding	Bet1l	ENSMUST00000210157	retained_intron		7	-1	140856270	1882
ENSMUSG00000118163	antisense	Gm41757	ENSMUST00000236639	antisense		18	1	65349157	786
ENSMUSG00000029390	protein_coding	Tmed2	ENSMUST00000200031	nonsense_mediated_decay		5	1	124540955	455
ENSMUSG00000085176	sense_intronic	Gm15397	ENSMUST00000145790	sense_intronic		10	1	73489974	804
ENSMUSG00000118163	antisense	Gm41757	ENSMUST00000237819	antisense		18	1	65350084	201
ENSMUSG00000097932	lincRNA	C430039J16Rik	ENSMUST00000181148	lincRNA		13	1	97283183	658
ENSMUSG00000025484	protein_coding	Bet1l	ENSMUST00000211590	protein_coding		7	-1	140856246	354
ENSMUSG00000112427	processed_pseudogene	Gm19168	ENSMUST00000218804	processed_pseudogene		10	-1	73376033	1091
ENSMUSG00000025484	protein_coding	Bet1l	ENSMUST00000211527	protein_coding		7	-1	140856246	298
ENSMUSG00000029390	protein_coding	Tmed2	ENSMUST00000124529	protein_coding		5	1	124541329	735
ENSMUSG00000095276	protein_coding	Gfy	ENSMUST00000179443	protein_coding	principal1	7	-1	45179569	1849
ENSMUSG00000114425	lincRNA	Gm33447	ENSMUST00000223964	lincRNA		13	1	97376234	935
ENSMUSG00000010841	protein_coding	Cfap97d1	ENSMUST00000010985	protein_coding	principal1	11	1	101987056	698
ENSMUSG00000085456	lincRNA	Gm15398	ENSMUST00000147653	lincRNA		10	-1	73327027	692
ENSMUSG00000095577	protein_coding	Gm6619	ENSMUST00000159229	protein_coding	principal1	6	1	131486400	608
ENSMUSG00000025484	protein_coding	Bet1l	ENSMUST00000209320	nonsense_mediated_decay		7	-1	140856317	386
ENSMUSG00000085456	lincRNA	Gm15398	ENSMUST00000219998	lincRNA		10	-1	73327175	1477
ENSMUSG00000029390	protein_coding	Tmed2	ENSMUST00000197112	retained_intron		5	1	124541336	425
ENSMUSG00000041153	protein_coding	Osgin2	ENSMUST00000037198	protein_coding	principal1	4	-1	16013888	2658
ENSMUSG00000093548	processed_pseudogene	Gm6407	ENSMUST00000176468	processed_pseudogene		10	-1	73690805	549
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000168117	nonsense_mediated_decay		10	1	69215302	2229
ENSMUSG00000025484	protein_coding	Bet1l	ENSMUST00000210710	protein_coding		7	-1	140857577	489
ENSMUSG00000093467	antisense	Gm20659	ENSMUST00000176599	antisense		11	1	101971143	604
ENSMUSG00000029390	protein_coding	Tmed2	ENSMUST00000135464	protein_coding		5	1	124543080	1630
ENSMUSG00000095276	protein_coding	Gfy	ENSMUST00000211004	protein_coding		7	-1	45179538	951
ENSMUSG00000025484	protein_coding	Bet1l	ENSMUST00000209318	processed_transcript		7	-1	140857109	424
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000164876	retained_intron		10	1	69212657	2381
ENSMUSG00000041153	protein_coding	Osgin2	ENSMUST00000134048	processed_transcript		4	-1	16002121	1966
ENSMUSG00000030378	protein_coding	Sult2a8	ENSMUST00000209425	nonsense_mediated_decay		7	-1	14446584	2049
ENSMUSG00000024603	protein_coding	Dctn4	ENSMUST00000223984	protein_coding	alternative1	18	1	60526185	2948
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000163760	protein_coding		10	1	69279345	719
ENSMUSG00000066241	protein_coding	Olfr514	ENSMUST00000084754	protein_coding	principal1	7	-1	108825997	933
ENSMUSG00000041153	protein_coding	Osgin2	ENSMUST00000149891	protein_coding		4	-1	16013796	623
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000167384	protein_coding		10	1	69212676	2331
ENSMUSG00000094113	protein_coding	5430401F13Rik	ENSMUST00000161385	protein_coding	principal1	6	1	131543762	608
ENSMUSG00000110136	protein_coding	Gm45785	ENSMUST00000209690	protein_coding	principal1	7	-1	140856331	988
ENSMUSG00000041153	protein_coding	Osgin2	ENSMUST00000148819	processed_transcript		4	-1	16013821	3432
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000163497	protein_coding		10	1	69213084	653
ENSMUSG00000109406	unprocessed_pseudogene	Olfr515-ps1	ENSMUST00000208389	unprocessed_pseudogene		7	-1	108843492	189
ENSMUSG00000041153	protein_coding	Osgin2	ENSMUST00000124770	processed_transcript		4	-1	16006405	707
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000164212	protein_coding		10	1	69213171	650
ENSMUSG00000024603	protein_coding	Dctn4	ENSMUST00000025505	protein_coding	principal2	18	1	60526201	3738
ENSMUSG00000115076	lincRNA	Gm49106	ENSMUST00000228516	lincRNA		15	-1	11630740	312
ENSMUSG00000115076	lincRNA	Gm49106	ENSMUST00000228923	lincRNA		15	-1	11630746	306
ENSMUSG00000094113	protein_coding	5430401F13Rik	ENSMUST00000075020	protein_coding	principal1	6	1	131486400	602
ENSMUSG00000100719	lincRNA	Gm28786	ENSMUST00000187228	lincRNA		Y	-1	38897918	172
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000185145	protein_coding		7	1	13278855	1053
ENSMUSG00000115804	lincRNA	Gm49107	ENSMUST00000228129	lincRNA		15	1	11630729	415
ENSMUSG00000060314	protein_coding	Zfp941	ENSMUST00000080651	protein_coding	alternative2	7	-1	140822178	2791
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000172261	protein_coding		10	1	69219385	461
ENSMUSG00000114572	processed_pseudogene	Gm48457	ENSMUST00000225875	processed_pseudogene		13	-1	106945529	307
ENSMUSG00000040455	protein_coding	Usp45	ENSMUST00000125262	retained_intron		4	1	21776261	592
ENSMUSG00000115035	processed_pseudogene	Gm9614	ENSMUST00000227870	processed_pseudogene		15	1	3053108	882
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000167286	protein_coding		10	1	69151434	491
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000156525	processed_transcript		7	1	13278865	3054
ENSMUSG00000060314	protein_coding	Zfp941	ENSMUST00000106052	protein_coding	principal2	7	-1	140822132	3851
ENSMUSG00000024603	protein_coding	Dctn4	ENSMUST00000223590	protein_coding		18	1	60526214	1530
ENSMUSG00000115502	processed_pseudogene	Gm49222	ENSMUST00000227256	processed_pseudogene		15	1	3115609	164
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000169569	processed_transcript		10	1	69265637	649
ENSMUSG00000062434	protein_coding	Olfr516	ENSMUST00000216092	protein_coding	principal1	7	-1	108850436	1493
ENSMUSG00000101740	lincRNA	Gm29360	ENSMUST00000185625	lincRNA		Y	-1	38937383	537
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000165765	processed_transcript		10	1	69279458	308
ENSMUSG00000062434	protein_coding	Olfr516	ENSMUST00000217279	protein_coding	principal1	7	-1	108850529	1441
ENSMUSG00000101740	lincRNA	Gm29360	ENSMUST00000191555	lincRNA		Y	-1	38937383	352
ENSMUSG00000060314	protein_coding	Zfp941	ENSMUST00000150053	nonsense_mediated_decay		7	-1	140822146	433
ENSMUSG00000037355	protein_coding	Uvssa	ENSMUST00000087864	protein_coding	principal1	5	1	33378696	7326
ENSMUSG00000062434	protein_coding	Olfr516	ENSMUST00000071410	protein_coding	principal1	7	-1	108846008	945
ENSMUSG00000101292	unprocessed_pseudogene	Gm29496	ENSMUST00000189854	unprocessed_pseudogene		Y	1	39078390	693
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000123846	processed_transcript		7	1	13279265	3175
ENSMUSG00000028232	protein_coding	Tmem68	ENSMUST00000029891	protein_coding	principal1	4	-1	3574853	2690
ENSMUSG00000081679	processed_pseudogene	Gm11874	ENSMUST00000117437	processed_pseudogene		4	-1	16120888	130
ENSMUSG00000019944	protein_coding	Rhobtb1	ENSMUST00000067908	protein_coding	principal1	10	1	69213194	4422
ENSMUSG00000099590	antisense	C330022C24Rik	ENSMUST00000190581	antisense		7	-1	140845689	1077
ENSMUSG00000032845	protein_coding	Alpk2	ENSMUST00000235298	protein_coding		18	-1	65304456	1445
ENSMUSG00000112573	lincRNA	Gm48324	ENSMUST00000218424	lincRNA		10	-1	10296929	1263
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000123025	protein_coding		7	1	13280146	688
ENSMUSG00000089792	transcribed_unprocessed_pseudogene	Gm16571	ENSMUST00000203839	processed_transcript		6	1	131585110	585
ENSMUSG00000024603	protein_coding	Dctn4	ENSMUST00000223794	retained_intron		18	1	60526218	1724
ENSMUSG00000028232	protein_coding	Tmem68	ENSMUST00000134806	retained_intron		4	-1	3552157	658
ENSMUSG00000089792	transcribed_unprocessed_pseudogene	Gm16571	ENSMUST00000159112	transcribed_unprocessed_pseudogene		6	1	131585132	291
ENSMUSG00000037355	protein_coding	Uvssa	ENSMUST00000202046	nonsense_mediated_decay		5	1	33378696	7222
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000147735	processed_transcript		7	1	13280146	2968
ENSMUSG00000024603	protein_coding	Dctn4	ENSMUST00000225005	retained_intron		18	1	60538430	797
ENSMUSG00000115585	processed_transcript	Gm41271	ENSMUST00000228108	processed_transcript		15	-1	11703703	1933
ENSMUSG00000037315	protein_coding	Jade3	ENSMUST00000115384	protein_coding	principal2	X	1	20425688	4866
ENSMUSG00000030378	protein_coding	Sult2a8	ENSMUST00000063509	protein_coding	principal1	7	-1	14446586	2143
ENSMUSG00000037355	protein_coding	Uvssa	ENSMUST00000202816	protein_coding	principal1	5	1	33378772	7165
ENSMUSG00000024603	protein_coding	Dctn4	ENSMUST00000224317	retained_intron		18	1	60538638	4331
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000138453	retained_intron		7	1	13302812	657
ENSMUSG00000100588	lincRNA	Gm29497	ENSMUST00000186801	lincRNA		Y	-1	39162080	1498
ENSMUSG00000115013	lincRNA	Gm49231	ENSMUST00000226888	lincRNA		15	1	3128564	732
ENSMUSG00000024603	protein_coding	Dctn4	ENSMUST00000224778	retained_intron		18	1	60545265	691
ENSMUSG00000056296	protein_coding	Synpr	ENSMUST00000070323	protein_coding	principal3	14	1	13284780	2541
ENSMUSG00000031617	protein_coding	Tmem184c	ENSMUST00000034030	protein_coding	principal1	8	-1	77610653	2678
ENSMUSG00000028232	protein_coding	Tmem68	ENSMUST00000142503	retained_intron		4	-1	3574804	633
ENSMUSG00000024603	protein_coding	Dctn4	ENSMUST00000224671	retained_intron		18	1	60555152	307
ENSMUSG00000034574	protein_coding	Daam1	ENSMUST00000223272	protein_coding	principal2	12	1	71831078	5835
ENSMUSG00000030378	protein_coding	Sult2a8	ENSMUST00000125941	protein_coding		7	-1	14446769	872
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000131294	retained_intron		7	1	13307187	946
ENSMUSG00000030378	protein_coding	Sult2a8	ENSMUST00000211800	protein_coding		7	-1	14436447	578
ENSMUSG00000062477	processed_pseudogene	Hmgb1l	ENSMUST00000082150	processed_pseudogene		6	-1	131608871	571
ENSMUSG00000100588	lincRNA	Gm29497	ENSMUST00000189149	lincRNA		Y	-1	39161627	437
ENSMUSG00000028232	protein_coding	Tmem68	ENSMUST00000150676	processed_transcript		4	-1	3574804	377
ENSMUSG00000030378	protein_coding	Sult2a8	ENSMUST00000210396	protein_coding		7	-1	14438509	601
ENSMUSG00000028232	protein_coding	Tmem68	ENSMUST00000134451	protein_coding		4	-1	3574527	626
ENSMUSG00000030378	protein_coding	Sult2a8	ENSMUST00000210366	retained_intron		7	-1	14438561	1172
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000127403	nonsense_mediated_decay		5	-1	122989794	2543
ENSMUSG00000102050	unprocessed_pseudogene	Gm29499	ENSMUST00000189151	unprocessed_pseudogene		Y	-1	39345030	486
ENSMUSG00000037315	protein_coding	Jade3	ENSMUST00000224892	nonsense_mediated_decay		X	1	20425717	4962
ENSMUSG00000038801	protein_coding	Scgb1c1	ENSMUST00000035300	protein_coding	principal1	7	1	140845547	455
ENSMUSG00000030378	protein_coding	Sult2a8	ENSMUST00000209972	protein_coding		7	-1	14445046	358
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000121739	protein_coding	alternative2	5	-1	122989823	4107
ENSMUSG00000031617	protein_coding	Tmem184c	ENSMUST00000152168	protein_coding		8	-1	77610698	695
ENSMUSG00000056296	protein_coding	Synpr	ENSMUST00000223580	processed_transcript		14	1	13284817	349
ENSMUSG00000096365	protein_coding	Olfr1463	ENSMUST00000207246	protein_coding	principal1	19	1	13231328	2315
ENSMUSG00000037315	protein_coding	Jade3	ENSMUST00000136093	retained_intron		X	1	20425788	1156
ENSMUSG00000031617	protein_coding	Tmem184c	ENSMUST00000141202	protein_coding		8	-1	77610668	458
ENSMUSG00000101548	unprocessed_pseudogene	Gm9220	ENSMUST00000190721	unprocessed_pseudogene		7	-1	38314859	2544
ENSMUSG00000096365	protein_coding	Olfr1463	ENSMUST00000064102	protein_coding	principal1	19	1	13234252	933
ENSMUSG00000030378	protein_coding	Sult2a8	ENSMUST00000168252	protein_coding	principal1	7	-1	14438551	2097
ENSMUSG00000101410	unprocessed_pseudogene	Gm28581	ENSMUST00000186086	unprocessed_pseudogene		7	-1	38296985	2177
ENSMUSG00000016327	protein_coding	Atp1b4	ENSMUST00000016471	protein_coding	principal3	X	1	38316184	4201
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000139674	retained_intron		5	-1	122881085	4244
ENSMUSG00000037315	protein_coding	Jade3	ENSMUST00000043693	protein_coding	alternative2	X	1	20460527	2472
ENSMUSG00000097965	processed_pseudogene	Gm5839	ENSMUST00000182835	processed_pseudogene		18	1	48626704	1007
ENSMUSG00000101036	antisense	Gm28588	ENSMUST00000191581	antisense		Y	-1	847750	796
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000152872	protein_coding		5	-1	122888580	888
ENSMUSG00000081529	processed_pseudogene	Gm14884	ENSMUST00000120456	processed_pseudogene		X	-1	20459685	196
ENSMUSG00000032845	protein_coding	Alpk2	ENSMUST00000035548	protein_coding	principal1	18	-1	65394066	7428
ENSMUSG00000108749	antisense	Gm44767	ENSMUST00000206634	antisense		7	1	38271412	469
ENSMUSG00000016327	protein_coding	Atp1b4	ENSMUST00000115134	protein_coding	alternative1	X	1	38316184	4189
ENSMUSG00000100440	lincRNA	Gm28405	ENSMUST00000185222	lincRNA		Y	1	88302085	1498
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000132419	retained_intron		5	-1	122882233	641
ENSMUSG00000090862	protein_coding	Rps13	ENSMUST00000170953	protein_coding	principal1	7	-1	116334195	589
ENSMUSG00000100440	lincRNA	Gm28405	ENSMUST00000187915	lincRNA		Y	1	88302537	438
ENSMUSG00000116832	TEC	Gm49658	ENSMUST00000232537	TEC		16	-1	74192499	3669
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000173355	processed_transcript		5	-1	122917724	516
ENSMUSG00000116902	TEC	Gm49660	ENSMUST00000231944	TEC		16	-1	74065853	3804
ENSMUSG00000056296	protein_coding	Synpr	ENSMUST00000225636	processed_transcript		14	1	13284830	668
ENSMUSG00000101494	unprocessed_pseudogene	Gm21792	ENSMUST00000188516	unprocessed_pseudogene		Y	-1	88402048	696
ENSMUSG00000116824	processed_pseudogene	Gm18021	ENSMUST00000231784	processed_pseudogene		16	1	74248893	862
ENSMUSG00000056296	protein_coding	Synpr	ENSMUST00000226094	processed_transcript		14	1	13284841	853
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000129998	processed_transcript		5	-1	122922107	550
ENSMUSG00000116740	TEC	Gm49659	ENSMUST00000231533	TEC		16	-1	74178834	2042
ENSMUSG00000090862	protein_coding	Rps13	ENSMUST00000205490	protein_coding		7	-1	116334133	1317
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000174357	retained_intron		5	-1	122921548	414
ENSMUSG00000057179	protein_coding	Olfr747	ENSMUST00000205373	protein_coding	principal1	14	-1	50693206	1132
ENSMUSG00000056296	protein_coding	Synpr	ENSMUST00000223583	protein_coding		14	1	13425737	3362
ENSMUSG00000099649	lincRNA	Gm28406	ENSMUST00000186516	lincRNA		Y	1	88418292	397
ENSMUSG00000057179	protein_coding	Olfr747	ENSMUST00000213238	protein_coding	principal1	14	-1	50692904	1416
ENSMUSG00000056296	protein_coding	Synpr	ENSMUST00000153954	protein_coding		14	1	13453958	747
ENSMUSG00000032845	protein_coding	Alpk2	ENSMUST00000141250	processed_transcript		18	-1	65349534	5060
ENSMUSG00000057179	protein_coding	Olfr747	ENSMUST00000205897	protein_coding		14	-1	50691729	187
ENSMUSG00000057179	protein_coding	Olfr747	ENSMUST00000078075	protein_coding	principal1	14	-1	50681645	955
ENSMUSG00000032845	protein_coding	Alpk2	ENSMUST00000182629	processed_transcript		18	-1	65393894	792
ENSMUSG00000056296	protein_coding	Synpr	ENSMUST00000145700	retained_intron		14	1	13453984	4289
ENSMUSG00000056296	protein_coding	Synpr	ENSMUST00000147677	retained_intron		14	1	13453984	2626
ENSMUSG00000117721	antisense	Gm50221	ENSMUST00000236871	antisense		18	1	65390334	2698
ENSMUSG00000111067	TEC	Gm48714	ENSMUST00000216902	TEC		10	-1	19874447	1441
ENSMUSG00000056296	protein_coding	Synpr	ENSMUST00000112656	protein_coding	alternative1	14	1	13454029	2576
ENSMUSG00000090862	protein_coding	Rps13	ENSMUST00000206712	retained_intron		7	-1	116333182	428
ENSMUSG00000118101	antisense	F730048M01Rik	ENSMUST00000235286	antisense		18	1	65306430	2148
ENSMUSG00000081115	processed_pseudogene	Gm15913	ENSMUST00000118492	processed_pseudogene		14	-1	13354080	331
ENSMUSG00000025482	protein_coding	Odf3	ENSMUST00000026555	protein_coding	principal1	7	1	140847805	1128
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000123479	retained_intron		5	-1	122989092	2753
ENSMUSG00000034574	protein_coding	Daam1	ENSMUST00000222327	retained_intron		12	1	71831116	3035
ENSMUSG00000098050	processed_pseudogene	Gm5345	ENSMUST00000183076	processed_pseudogene		8	-1	40855027	1014
ENSMUSG00000025482	protein_coding	Odf3	ENSMUST00000106049	protein_coding		7	1	140847823	1509
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000156474	protein_coding		5	-1	122988536	1598
ENSMUSG00000104249	processed_pseudogene	Gm38151	ENSMUST00000195085	processed_pseudogene		3	-1	14629240	289
ENSMUSG00000003657	protein_coding	Calb2	ENSMUST00000212297	protein_coding		8	-1	110168210	1080
ENSMUSG00000090862	protein_coding	Rps13	ENSMUST00000206963	retained_intron		7	-1	116334130	653
ENSMUSG00000107526	lincRNA	1700003I16Rik	ENSMUST00000205198	lincRNA		6	-1	149215185	1058
ENSMUSG00000090862	protein_coding	Rps13	ENSMUST00000205548	retained_intron		7	-1	116334135	2363
ENSMUSG00000025482	protein_coding	Odf3	ENSMUST00000135845	retained_intron		7	1	140847824	1629
ENSMUSG00000107894	TEC	Gm10388	ENSMUST00000205001	TEC		6	-1	149286773	2936
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000145082	protein_coding		5	-1	122952506	1043
ENSMUSG00000090862	protein_coding	Rps13	ENSMUST00000205906	nonsense_mediated_decay		7	-1	116334166	1150
ENSMUSG00000003657	protein_coding	Calb2	ENSMUST00000003754	protein_coding	principal1	8	-1	110168206	1431
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000143273	processed_transcript		5	-1	122947994	724
ENSMUSG00000111254	TEC	Gm48717	ENSMUST00000216206	TEC		9	-1	37139624	1072
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000138929	processed_transcript		5	-1	122953117	464
ENSMUSG00000090862	protein_coding	Rps13	ENSMUST00000205265	retained_intron		7	-1	116334117	1927
ENSMUSG00000076563	IG_V_gene	Igkv5-48	ENSMUST00000103364	IG_V_gene	principal1	6	-1	69727138	360
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000147544	processed_transcript		5	-1	122951990	625
ENSMUSG00000061458	protein_coding	Nol10	ENSMUST00000046011	protein_coding	principal1	12	1	17348458	3021
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000168097	nonsense_mediated_decay		11	1	120673063	624
ENSMUSG00000034574	protein_coding	Daam1	ENSMUST00000221971	retained_intron		12	1	71831148	3149
ENSMUSG00000090862	protein_coding	Rps13	ENSMUST00000206748	retained_intron		7	-1	116334122	958
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000134501	retained_intron		5	-1	122989099	1491
ENSMUSG00000098238	processed_pseudogene	Gm8756	ENSMUST00000183250	processed_pseudogene		13	-1	97459077	929
ENSMUSG00000113246	lincRNA	Gm36752	ENSMUST00000220527	lincRNA		12	1	17436618	1546
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000150543	processed_transcript		5	-1	122984971	697
ENSMUSG00000106256	IG_V_pseudogene	Igkv12-47	ENSMUST00000196961	IG_V_pseudogene		6	-1	69751331	356
ENSMUSG00000084123	unprocessed_pseudogene	Gm13106	ENSMUST00000119045	unprocessed_pseudogene		4	-1	143930736	1443
ENSMUSG00000034574	protein_coding	Daam1	ENSMUST00000085299	protein_coding	principal2	12	1	71831163	5879
ENSMUSG00000078952	lincRNA	Lncenc1	ENSMUST00000109431	lincRNA		13	1	97434970	2726
ENSMUSG00000112831	lincRNA	Gm35533	ENSMUST00000218902	lincRNA		10	-1	100144126	675
ENSMUSG00000078952	lincRNA	Lncenc1	ENSMUST00000179324	lincRNA		13	1	97482701	2764
ENSMUSG00000029475	protein_coding	Kdm2b	ENSMUST00000086200	protein_coding	alternative2	5	-1	122988533	4999
ENSMUSG00000112633	TEC	Gm47627	ENSMUST00000220057	TEC		10	-1	100204342	469
ENSMUSG00000078952	lincRNA	Lncenc1	ENSMUST00000180371	lincRNA		13	1	97482955	492
ENSMUSG00000018774	protein_coding	Cd68	ENSMUST00000018918	protein_coding	principal2	11	-1	69666153	1230
ENSMUSG00000034574	protein_coding	Daam1	ENSMUST00000221317	protein_coding	alternative1	12	1	71889730	5790
ENSMUSG00000112245	unprocessed_pseudogene	Gm8689	ENSMUST00000218709	unprocessed_pseudogene		10	-1	100298652	712
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000103016	protein_coding		11	1	120673064	1689
ENSMUSG00000066902	processed_pseudogene	Rps23-ps2	ENSMUST00000146939	processed_pseudogene		8	-1	3584230	432
ENSMUSG00000055447	protein_coding	Cd47	ENSMUST00000229640	protein_coding		16	1	49800533	1898
ENSMUSG00000003436	protein_coding	Dll3	ENSMUST00000108315	protein_coding	principal1	7	-1	28302238	2618
ENSMUSG00000055447	protein_coding	Cd47	ENSMUST00000114496	protein_coding		16	1	49855366	1175
ENSMUSG00000018774	protein_coding	Cd68	ENSMUST00000154124	processed_transcript		11	-1	69666062	612
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000168714	protein_coding		11	1	120673083	540
ENSMUSG00000046792	protein_coding	Zfp787	ENSMUST00000094870	protein_coding	principal1	7	-1	6155971	1897
ENSMUSG00000046441	protein_coding	Cmtr2	ENSMUST00000189685	protein_coding		8	1	110215665	843
ENSMUSG00000055447	protein_coding	Cd47	ENSMUST00000229101	protein_coding		16	1	49855633	1358
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000143844	nonsense_mediated_decay		11	1	120673098	636
ENSMUSG00000003436	protein_coding	Dll3	ENSMUST00000138721	retained_intron		7	-1	28294481	665
ENSMUSG00000065952	protein_coding	Rps23rg1	ENSMUST00000138454	retained_intron		8	1	3567990	637
ENSMUSG00000046792	protein_coding	Zfp787	ENSMUST00000207315	protein_coding		7	-1	6155595	696
ENSMUSG00000065952	protein_coding	Rps23rg1	ENSMUST00000153341	retained_intron		8	1	3567995	960
ENSMUSG00000056735	antisense	A930024E05Rik	ENSMUST00000148466	antisense		5	1	122989354	1896
ENSMUSG00000046792	protein_coding	Zfp787	ENSMUST00000208894	retained_intron		7	-1	6142845	2845
ENSMUSG00000027555	protein_coding	Car13	ENSMUST00000029071	protein_coding	principal1	3	1	14641727	2299
ENSMUSG00000003436	protein_coding	Dll3	ENSMUST00000145512	retained_intron		7	-1	28301772	855
ENSMUSG00000046441	protein_coding	Cmtr2	ENSMUST00000056972	protein_coding	principal1	8	1	110217989	3545
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000135346	protein_coding		11	1	120673359	920
ENSMUSG00000029603	protein_coding	Dtx1	ENSMUST00000031607	protein_coding	principal1	5	-1	120711927	4035
ENSMUSG00000018774	protein_coding	Cd68	ENSMUST00000108654	protein_coding	alternative2	11	-1	69666062	1008
ENSMUSG00000073953	protein_coding	Olfr596	ENSMUST00000214577	protein_coding	principal1	7	1	103305648	3392
ENSMUSG00000114926	lincRNA	Gm2379	ENSMUST00000225874	lincRNA		13	1	97511204	463
ENSMUSG00000073953	protein_coding	Olfr596	ENSMUST00000104880	protein_coding	principal1	7	1	103309723	939
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000127269	protein_coding		11	1	120673374	408
ENSMUSG00000065952	protein_coding	Rps23rg1	ENSMUST00000136592	protein_coding	principal2	8	1	3567998	1621
ENSMUSG00000046792	protein_coding	Zfp787	ENSMUST00000207628	protein_coding		7	-1	6155997	576
ENSMUSG00000084092	unprocessed_pseudogene	Gm5843	ENSMUST00000121631	unprocessed_pseudogene		3	1	14722416	476
ENSMUSG00000082877	processed_pseudogene	Gm13009	ENSMUST00000121307	processed_pseudogene		4	-1	136074972	267
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000131727	protein_coding		11	1	120673374	694
ENSMUSG00000046792	protein_coding	Zfp787	ENSMUST00000207957	protein_coding		7	-1	6155926	880
ENSMUSG00000065952	protein_coding	Rps23rg1	ENSMUST00000151633	protein_coding	alternative2	8	1	3579730	1297
ENSMUSG00000065952	protein_coding	Rps23rg1	ENSMUST00000086479	protein_coding	principal2	8	1	3580469	1111
ENSMUSG00000046792	protein_coding	Zfp787	ENSMUST00000207331	protein_coding		7	-1	6151048	376
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000149389	protein_coding		11	1	120673392	1030
ENSMUSG00000038300	protein_coding	Pth2	ENSMUST00000042754	protein_coding	principal1	7	1	45180995	503
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000153346	protein_coding		11	1	120673404	489
ENSMUSG00000046792	protein_coding	Zfp787	ENSMUST00000208746	protein_coding		7	-1	6155434	535
ENSMUSG00000038300	protein_coding	Pth2	ENSMUST00000210086	protein_coding		7	1	45181182	481
ENSMUSG00000090539	protein_coding	Gm9602	ENSMUST00000163325	protein_coding	principal5	14	1	4776337	2062
ENSMUSG00000108923	TEC	4933431C10Rik	ENSMUST00000208973	TEC		7	1	6136430	1266
ENSMUSG00000090539	protein_coding	Gm9602	ENSMUST00000177973	protein_coding	alternative2	14	1	4776414	615
ENSMUSG00000030423	protein_coding	Pop4	ENSMUST00000032585	protein_coding	principal1	7	-1	38271423	2113
ENSMUSG00000005547	protein_coding	Cyp2a5	ENSMUST00000005685	protein_coding	principal1	7	1	26835305	2013
ENSMUSG00000108894	TEC	Gm45841	ENSMUST00000207700	TEC		7	-1	6155450	164
ENSMUSG00000069053	protein_coding	Uba1y	ENSMUST00000190013	protein_coding	principal1	Y	1	818649	3441
ENSMUSG00000069053	protein_coding	Uba1y	ENSMUST00000115894	protein_coding	principal1	Y	1	818713	3981
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000106160	protein_coding		11	1	120676661	1550
ENSMUSG00000101040	lincRNA	Gm29498	ENSMUST00000186449	lincRNA		Y	1	39411821	537
ENSMUSG00000101040	lincRNA	Gm29498	ENSMUST00000188911	lincRNA		Y	1	39411821	352
ENSMUSG00000027799	protein_coding	Nbea	ENSMUST00000029374	protein_coding	principal1	3	-1	56183701	10986
ENSMUSG00000005547	protein_coding	Cyp2a5	ENSMUST00000168869	nonsense_mediated_decay		7	1	26835364	998
ENSMUSG00000055447	protein_coding	Cd47	ENSMUST00000230836	protein_coding		16	1	49855645	1150
ENSMUSG00000101272	lincRNA	Gm36782	ENSMUST00000189459	lincRNA		Y	1	39451243	174
ENSMUSG00000005547	protein_coding	Cyp2a5	ENSMUST00000165641	processed_transcript		7	1	26836203	797
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000129644	protein_coding		11	1	120677226	185
ENSMUSG00000055447	protein_coding	Cd47	ENSMUST00000229206	protein_coding	principal1	16	1	49855645	1316
ENSMUSG00000085347	antisense	Hk1os	ENSMUST00000123457	antisense		10	1	62340256	522
ENSMUSG00000030423	protein_coding	Pop4	ENSMUST00000206221	nonsense_mediated_decay		7	-1	38271327	892
ENSMUSG00000027799	protein_coding	Nbea	ENSMUST00000199803	protein_coding		3	-1	55690940	3433
ENSMUSG00000005547	protein_coding	Cyp2a5	ENSMUST00000169007	protein_coding		7	1	26840468	539
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000151160	protein_coding		11	1	120677339	820
ENSMUSG00000025337	protein_coding	Sbds	ENSMUST00000026387	protein_coding	principal1	5	-1	130255530	1548
ENSMUSG00000086781	lincRNA	1700092C02Rik	ENSMUST00000134397	lincRNA		8	1	77624172	359
ENSMUSG00000005547	protein_coding	Cyp2a5	ENSMUST00000170631	protein_coding		7	1	26840944	442
ENSMUSG00000030423	protein_coding	Pop4	ENSMUST00000205899	nonsense_mediated_decay		7	-1	38271369	793
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000168510	protein_coding		11	1	120686693	408
ENSMUSG00000117885	lincRNA	Gm50229	ENSMUST00000235212	lincRNA		18	1	48663724	417
ENSMUSG00000030423	protein_coding	Pop4	ENSMUST00000205959	retained_intron		7	-1	38271349	816
ENSMUSG00000055447	protein_coding	Cd47	ENSMUST00000231187	processed_transcript		16	1	49855645	1313
ENSMUSG00000085347	antisense	Hk1os	ENSMUST00000143122	antisense		10	1	62340607	1218
ENSMUSG00000085347	antisense	Hk1os	ENSMUST00000142968	antisense		10	1	62340622	343
ENSMUSG00000030423	protein_coding	Pop4	ENSMUST00000205753	nonsense_mediated_decay		7	-1	38271373	591
ENSMUSG00000118290	processed_pseudogene	Gm18993	ENSMUST00000237787	processed_pseudogene		18	1	49063424	968
ENSMUSG00000025337	protein_coding	Sbds	ENSMUST00000139211	nonsense_mediated_decay		5	-1	130255405	815
ENSMUSG00000030423	protein_coding	Pop4	ENSMUST00000206045	retained_intron		7	-1	38271275	724
ENSMUSG00000109100	polymorphic_pseudogene	Olfr1464-ps1	ENSMUST00000208760	polymorphic_pseudogene	principal1	19	-1	13283056	923
ENSMUSG00000025337	protein_coding	Sbds	ENSMUST00000125625	protein_coding		5	-1	130254085	915
ENSMUSG00000055447	protein_coding	Cd47	ENSMUST00000084838	protein_coding		16	1	49855645	5250
ENSMUSG00000086451	processed_transcript	4933431K23Rik	ENSMUST00000139140	antisense		8	1	77610860	2074
ENSMUSG00000055447	protein_coding	Cd47	ENSMUST00000230281	protein_coding		16	1	49855656	1271
ENSMUSG00000086451	processed_transcript	4933431K23Rik	ENSMUST00000153937	processed_transcript		8	1	77659248	2603
ENSMUSG00000086451	processed_transcript	4933431K23Rik	ENSMUST00000209273	processed_transcript		8	1	77723584	2857
ENSMUSG00000055447	protein_coding	Cd47	ENSMUST00000230641	protein_coding		16	1	49855787	1032
ENSMUSG00000055447	protein_coding	Cd47	ENSMUST00000229104	protein_coding		16	1	49866833	1179
ENSMUSG00000086451	processed_transcript	4933431K23Rik	ENSMUST00000133139	processed_transcript		8	1	77764359	1117
ENSMUSG00000027799	protein_coding	Nbea	ENSMUST00000199535	processed_transcript		3	-1	55786902	2936
ENSMUSG00000025337	protein_coding	Sbds	ENSMUST00000200815	processed_transcript		5	-1	130255492	435
ENSMUSG00000109866	TEC	Gm45714	ENSMUST00000211466	TEC		8	1	77659691	2722
ENSMUSG00000027799	protein_coding	Nbea	ENSMUST00000198259	retained_intron		3	-1	55723947	811
ENSMUSG00000029603	protein_coding	Dtx1	ENSMUST00000145174	retained_intron		5	-1	120695403	2961
ENSMUSG00000029603	protein_coding	Dtx1	ENSMUST00000201264	retained_intron		5	-1	120682079	1831
ENSMUSG00000025337	protein_coding	Sbds	ENSMUST00000201598	processed_transcript		5	-1	130255478	360
ENSMUSG00000027799	protein_coding	Nbea	ENSMUST00000199126	retained_intron		3	-1	55787945	4717
ENSMUSG00000027799	protein_coding	Nbea	ENSMUST00000196612	retained_intron		3	-1	55783490	3860
ENSMUSG00000062647	protein_coding	Rpl7a	ENSMUST00000102898	protein_coding	principal1	2	1	26910764	914
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000166838	nonsense_mediated_decay		11	1	120689274	870
ENSMUSG00000027799	protein_coding	Nbea	ENSMUST00000196577	retained_intron		3	-1	55968236	7326
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000167678	protein_coding		11	1	120689310	659
ENSMUSG00000027799	protein_coding	Nbea	ENSMUST00000198315	retained_intron		3	-1	56004630	833
ENSMUSG00000027799	protein_coding	Nbea	ENSMUST00000197395	retained_intron		3	-1	56021178	3158
ENSMUSG00000029603	protein_coding	Dtx1	ENSMUST00000144889	retained_intron		5	-1	120682915	871
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000168947	nonsense_mediated_decay		11	1	120702514	395
ENSMUSG00000029603	protein_coding	Dtx1	ENSMUST00000151562	retained_intron		5	-1	120682813	507
ENSMUSG00000027799	protein_coding	Nbea	ENSMUST00000200526	retained_intron		3	-1	56041348	3740
ENSMUSG00000025486	protein_coding	Sirt3	ENSMUST00000210296	nonsense_mediated_decay		7	-1	140882289	1598
ENSMUSG00000105293	TEC	Gm42843	ENSMUST00000196328	TEC		3	-1	56167569	3616
ENSMUSG00000029603	protein_coding	Dtx1	ENSMUST00000124079	processed_transcript		5	-1	120705889	540
ENSMUSG00000106572	transcribed_processed_pseudogene	4933417G07Rik	ENSMUST00000199732	transcribed_processed_pseudogene		3	1	55847105	964
ENSMUSG00000020436	protein_coding	Gabrg2	ENSMUST00000070725	protein_coding	alternative1	11	-1	42000857	4041
ENSMUSG00000106572	transcribed_processed_pseudogene	4933417G07Rik	ENSMUST00000199681	processed_transcript		3	1	55847264	1137
ENSMUSG00000115397	processed_pseudogene	Gm49232	ENSMUST00000227475	processed_pseudogene		15	1	3177707	1432
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000152990	retained_intron		11	1	120708658	468
ENSMUSG00000107784	processed_pseudogene	Gm43943	ENSMUST00000204201	processed_pseudogene		6	1	131613688	113
ENSMUSG00000104677	antisense	Gm43376	ENSMUST00000199747	antisense		3	1	55890306	1743
ENSMUSG00000006024	protein_coding	Napa	ENSMUST00000006181	protein_coding	principal1	7	1	16098458	2517
ENSMUSG00000104677	antisense	Gm43376	ENSMUST00000198939	antisense		3	1	55890377	1887
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000151531	retained_intron		11	1	120708760	520
ENSMUSG00000020671	protein_coding	Rab10	ENSMUST00000021001	protein_coding	principal1	12	-1	3309969	3513
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000172392	retained_intron		11	1	120708858	491
ENSMUSG00000106528	TEC	Gm42841	ENSMUST00000199806	TEC		3	-1	56130527	1932
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000165964	protein_coding	principal1	7	1	13279265	3166
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000106159	protein_coding		11	1	120676661	1615
ENSMUSG00000104938	TEC	Gm42840	ENSMUST00000200303	TEC		3	-1	56017168	2251
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000177588	protein_coding	principal1	7	1	13277313	3174
ENSMUSG00000025142	protein_coding	Aspscr1	ENSMUST00000106158	protein_coding		11	1	120673056	1690
ENSMUSG00000006024	protein_coding	Napa	ENSMUST00000127637	nonsense_mediated_decay		7	1	16098608	525
ENSMUSG00000056394	protein_coding	Lig1	ENSMUST00000098814	protein_coding	principal1	7	1	13278826	3091
ENSMUSG00000031616	protein_coding	Ednra	ENSMUST00000034029	protein_coding	principal1	8	-1	77724436	3625
ENSMUSG00000112716	lincRNA	4930471E19Rik	ENSMUST00000219150	lincRNA		10	-1	120699203	737
ENSMUSG00000020436	protein_coding	Gabrg2	ENSMUST00000070735	protein_coding	principal4	11	-1	42000532	2234
ENSMUSG00000112716	lincRNA	4930471E19Rik	ENSMUST00000219022	lincRNA		10	-1	120635916	1514
ENSMUSG00000090758	antisense	Gm17178	ENSMUST00000163273	antisense		11	-1	120709447	357
ENSMUSG00000103213	TEC	Gm38289	ENSMUST00000194273	TEC		10	-1	120667017	597
ENSMUSG00000031461	protein_coding	Myom2	ENSMUST00000033842	protein_coding	principal1	8	1	15057653	5075
ENSMUSG00000113898	processed_pseudogene	Gm19144	ENSMUST00000221921	processed_pseudogene		12	1	69970386	1859
ENSMUSG00000103017	TEC	Gm37505	ENSMUST00000195670	TEC		10	1	120731815	461
ENSMUSG00000006024	protein_coding	Napa	ENSMUST00000124563	retained_intron		7	1	16098632	891
ENSMUSG00000113491	processed_pseudogene	Gm19221	ENSMUST00000221827	processed_pseudogene		12	1	69980886	1477
ENSMUSG00000020436	protein_coding	Gabrg2	ENSMUST00000146198	retained_intron		11	-1	41916623	1221
ENSMUSG00000006024	protein_coding	Napa	ENSMUST00000132828	retained_intron		7	1	16098638	476
ENSMUSG00000085078	sense_intronic	C030013C21Rik	ENSMUST00000133400	sense_intronic		11	-1	80509106	795
ENSMUSG00000031616	protein_coding	Ednra	ENSMUST00000146561	retained_intron		8	-1	77724464	3147
ENSMUSG00000031461	protein_coding	Myom2	ENSMUST00000135908	processed_transcript		8	1	15058975	262
ENSMUSG00000070814	protein_coding	Zswim9	ENSMUST00000119139	protein_coding	principal5	7	-1	13278144	3986
ENSMUSG00000020436	protein_coding	Gabrg2	ENSMUST00000109290	protein_coding		11	-1	42000356	2868
ENSMUSG00000006024	protein_coding	Napa	ENSMUST00000139507	retained_intron		7	1	16107616	463
ENSMUSG00000084293	processed_pseudogene	Gm12143	ENSMUST00000119666	processed_pseudogene		11	-1	41789819	332
ENSMUSG00000020992	processed_transcript	4930512B01Rik	ENSMUST00000021378	antisense		12	1	69790288	1856
ENSMUSG00000031461	protein_coding	Myom2	ENSMUST00000131251	retained_intron		8	1	15060190	3973
ENSMUSG00000100955	unprocessed_pseudogene	Gm18728	ENSMUST00000186155	unprocessed_pseudogene		1	1	103171926	753
ENSMUSG00000062647	protein_coding	Rpl7a	ENSMUST00000136269	processed_transcript		2	1	26910817	878
ENSMUSG00000070814	protein_coding	Zswim9	ENSMUST00000119558	protein_coding	alternative2	7	-1	13278683	3111
ENSMUSG00000006024	protein_coding	Napa	ENSMUST00000150208	retained_intron		7	1	16113644	798
ENSMUSG00000031461	protein_coding	Myom2	ENSMUST00000135393	retained_intron		8	1	15106025	645
ENSMUSG00000045349	protein_coding	Sh2d5	ENSMUST00000105824	protein_coding	principal1	4	1	138250403	3512
ENSMUSG00000068134	protein_coding	Zfp120	ENSMUST00000122859	nonsense_mediated_decay		2	-1	150136678	4181
ENSMUSG00000020992	processed_transcript	4930512B01Rik	ENSMUST00000188608	antisense		12	1	69790335	983
ENSMUSG00000112757	TEC	Gm10743	ENSMUST00000219611	TEC		10	-1	120748333	2358
ENSMUSG00000006024	protein_coding	Napa	ENSMUST00000140640	retained_intron		7	1	16115104	495
ENSMUSG00000020992	processed_transcript	4930512B01Rik	ENSMUST00000223529	retained_intron		12	1	69790355	3150
ENSMUSG00000068134	protein_coding	Zfp120	ENSMUST00000109931	protein_coding		2	-1	150136678	4033
ENSMUSG00000045349	protein_coding	Sh2d5	ENSMUST00000124239	protein_coding		4	1	138250413	722
ENSMUSG00000070814	protein_coding	Zswim9	ENSMUST00000135898	retained_intron		7	-1	13278721	4282
ENSMUSG00000100529	antisense	Gm19261	ENSMUST00000189628	antisense		19	-1	11516953	539
ENSMUSG00000070814	protein_coding	Zswim9	ENSMUST00000140530	retained_intron		7	-1	13278670	4208
ENSMUSG00000078370	processed_pseudogene	Gm6316	ENSMUST00000082064	processed_pseudogene		12	-1	69921491	1020
ENSMUSG00000031461	protein_coding	Myom2	ENSMUST00000140033	processed_transcript		8	1	15119007	744
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000177218	protein_coding	principal1	9	-1	37083309	3393
ENSMUSG00000083000	processed_pseudogene	Gm15678	ENSMUST00000117573	processed_pseudogene		8	-1	15101350	960
ENSMUSG00000070814	protein_coding	Zswim9	ENSMUST00000137574	retained_intron		7	-1	13278422	4151
ENSMUSG00000027220	protein_coding	Syt13	ENSMUST00000028648	protein_coding	principal1	2	1	92915098	3761
ENSMUSG00000070814	protein_coding	Zswim9	ENSMUST00000211707	retained_intron		7	-1	13278436	2483
ENSMUSG00000086386	lincRNA	Gm12108	ENSMUST00000145338	lincRNA		11	-1	32101228	2589
ENSMUSG00000102912	TEC	Gm20731	ENSMUST00000193462	TEC		4	-1	108625216	2288
ENSMUSG00000068134	protein_coding	Zfp120	ENSMUST00000089207	protein_coding	principal1	2	-1	150136708	4127
ENSMUSG00000070814	protein_coding	Zswim9	ENSMUST00000144470	protein_coding		7	-1	13278662	181
ENSMUSG00000091985	lincRNA	Gm17354	ENSMUST00000170933	lincRNA		4	-1	108637441	3039
ENSMUSG00000068134	protein_coding	Zfp120	ENSMUST00000142792	processed_transcript		2	-1	150136656	529
ENSMUSG00000045466	protein_coding	Zfp956	ENSMUST00000101445	protein_coding	principal1	6	1	47953390	2761
ENSMUSG00000112069	unprocessed_pseudogene	Gm9476	ENSMUST00000179109	unprocessed_pseudogene		10	-1	100307193	696
ENSMUSG00000020003	protein_coding	Pex7	ENSMUST00000020182	protein_coding	principal1	10	-1	19907689	8099
ENSMUSG00000068134	protein_coding	Zfp120	ENSMUST00000094538	protein_coding		2	-1	150136642	1245
ENSMUSG00000045349	protein_coding	Sh2d5	ENSMUST00000139033	processed_transcript		4	1	138250423	459
ENSMUSG00000070814	protein_coding	Zswim9	ENSMUST00000108532	protein_coding	alternative2	7	-1	13278721	3346
ENSMUSG00000045349	protein_coding	Sh2d5	ENSMUST00000105823	protein_coding	principal1	4	1	138250464	3529
ENSMUSG00000045466	protein_coding	Zfp956	ENSMUST00000174790	retained_intron		6	1	47953445	577
ENSMUSG00000111660	polymorphic_pseudogene	Olfr964-ps1	ENSMUST00000217577	polymorphic_pseudogene	principal1	9	-1	39686942	914
ENSMUSG00000020003	protein_coding	Pex7	ENSMUST00000125942	retained_intron		10	-1	19869674	587
ENSMUSG00000045349	protein_coding	Sh2d5	ENSMUST00000154421	retained_intron		4	1	138256735	882
ENSMUSG00000101408	unprocessed_pseudogene	Gm21155	ENSMUST00000190460	unprocessed_pseudogene		Y	-1	76501467	693
ENSMUSG00000025486	protein_coding	Sirt3	ENSMUST00000106048	protein_coding	principal1	7	-1	140881869	1416
ENSMUSG00000045466	protein_coding	Zfp956	ENSMUST00000140719	nonsense_mediated_decay		6	1	47953447	2823
ENSMUSG00000025486	protein_coding	Sirt3	ENSMUST00000211179	protein_coding		7	-1	140882298	1606
ENSMUSG00000020003	protein_coding	Pex7	ENSMUST00000166511	protein_coding		10	-1	19907647	1047
ENSMUSG00000062647	protein_coding	Rpl7a	ENSMUST00000137376	processed_transcript		2	1	26910821	1043
ENSMUSG00000025486	protein_coding	Sirt3	ENSMUST00000026559	protein_coding	principal1	7	-1	140882309	1461
ENSMUSG00000100643	unprocessed_pseudogene	Gm21163	ENSMUST00000189276	unprocessed_pseudogene		Y	-1	76576410	693
ENSMUSG00000062647	protein_coding	Rpl7a	ENSMUST00000143678	processed_transcript		2	1	26911006	920
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000201218	processed_transcript		16	1	56048338	1136
ENSMUSG00000101898	unprocessed_pseudogene	Gm28122	ENSMUST00000187088	unprocessed_pseudogene		Y	-1	76606064	615
ENSMUSG00000020003	protein_coding	Pex7	ENSMUST00000214951	retained_intron		10	-1	19907651	4114
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000201476	processed_transcript		16	1	56075404	1169
ENSMUSG00000100050	unprocessed_pseudogene	Gm28121	ENSMUST00000191420	unprocessed_pseudogene		Y	-1	76642608	339
ENSMUSG00000062647	protein_coding	Rpl7a	ENSMUST00000129673	processed_transcript		2	1	26912192	834
ENSMUSG00000025486	protein_coding	Sirt3	ENSMUST00000137024	protein_coding		7	-1	140878147	690
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000040010	protein_coding	principal3	X	-1	8145697	2792
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000202178	protein_coding		11	1	61956779	2932
ENSMUSG00000100391	unprocessed_pseudogene	Gm28978	ENSMUST00000191120	unprocessed_pseudogene		Y	-1	88431592	615
ENSMUSG00000024677	protein_coding	Ms4a6b	ENSMUST00000163078	protein_coding	principal1	19	1	11516512	2680
ENSMUSG00000062647	protein_coding	Rpl7a	ENSMUST00000147143	processed_transcript		2	1	26912619	593
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000201915	processed_transcript		16	1	56075424	855
ENSMUSG00000062647	protein_coding	Rpl7a	ENSMUST00000149339	processed_transcript		2	1	26912671	356
ENSMUSG00000025486	protein_coding	Sirt3	ENSMUST00000147331	protein_coding		7	-1	140881869	784
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000136971	retained_intron		11	1	61956810	2792
ENSMUSG00000025486	protein_coding	Sirt3	ENSMUST00000210706	retained_intron		7	-1	140877046	3206
ENSMUSG00000025486	protein_coding	Sirt3	ENSMUST00000210974	retained_intron		7	-1	140881827	1272
ENSMUSG00000024677	protein_coding	Ms4a6b	ENSMUST00000161157	retained_intron		19	1	11518566	4286
ENSMUSG00000047139	protein_coding	Cd24a	ENSMUST00000214532	processed_transcript		10	1	43578284	574
ENSMUSG00000025486	protein_coding	Sirt3	ENSMUST00000137710	protein_coding		7	-1	140881869	456
ENSMUSG00000024677	protein_coding	Ms4a6b	ENSMUST00000159587	retained_intron		19	1	11518594	429
ENSMUSG00000020990	protein_coding	Cdkl1	ENSMUST00000021377	protein_coding	principal1	12	-1	69790707	1689
ENSMUSG00000025486	protein_coding	Sirt3	ENSMUST00000210398	retained_intron		7	-1	140882296	1223
ENSMUSG00000024677	protein_coding	Ms4a6b	ENSMUST00000161283	nonsense_mediated_decay		19	1	11521671	498
ENSMUSG00000020990	protein_coding	Cdkl1	ENSMUST00000221646	protein_coding		12	-1	69791267	465
ENSMUSG00000034940	protein_coding	Synrg	ENSMUST00000049714	protein_coding	alternative2	11	1	83964428	3995
ENSMUSG00000024677	protein_coding	Ms4a6b	ENSMUST00000025580	protein_coding	principal1	19	1	11518559	1687
ENSMUSG00000040455	protein_coding	Usp45	ENSMUST00000065111	protein_coding	principal3	4	1	21776272	6003
ENSMUSG00000112737	unprocessed_pseudogene	Gm4898	ENSMUST00000218519	unprocessed_pseudogene		10	1	100325457	832
ENSMUSG00000022574	protein_coding	Naprt	ENSMUST00000023237	protein_coding	principal1	15	-1	75894481	1898
ENSMUSG00000047139	protein_coding	Cd24a	ENSMUST00000058714	protein_coding	principal2	10	1	43579169	1816
ENSMUSG00000112931	protein_coding	Gm4303	ENSMUST00000218922	protein_coding	principal1	10	1	100345972	910
ENSMUSG00000049657	protein_coding	Zbtb5	ENSMUST00000055028	protein_coding	principal1	4	-1	45012394	4316
ENSMUSG00000108193	unprocessed_pseudogene	Olfr442-ps1	ENSMUST00000204261	unprocessed_pseudogene		6	1	43099400	316
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000115619	protein_coding	alternative1	X	-1	8145679	969
ENSMUSG00000079076	transcribed_processed_pseudogene	Gm3086	ENSMUST00000110560	processed_transcript		12	1	69963409	620
ENSMUSG00000079076	transcribed_processed_pseudogene	Gm3086	ENSMUST00000221248	transcribed_processed_pseudogene		12	1	69969294	310
ENSMUSG00000022574	protein_coding	Naprt	ENSMUST00000229571	nonsense_mediated_decay		15	-1	75894290	1615
ENSMUSG00000040455	protein_coding	Usp45	ENSMUST00000040429	protein_coding	alternative2	4	1	21776272	5861
ENSMUSG00000047139	protein_coding	Cd24a	ENSMUST00000214476	protein_coding	alternative2	10	1	43579935	743
ENSMUSG00000040455	protein_coding	Usp45	ENSMUST00000148304	protein_coding		4	1	21776281	818
ENSMUSG00000096744	protein_coding	Gm4307	ENSMUST00000177945	protein_coding	principal1	10	1	100361338	910
ENSMUSG00000022574	protein_coding	Naprt	ENSMUST00000230739	retained_intron		15	-1	75891633	489
ENSMUSG00000040455	protein_coding	Usp45	ENSMUST00000108232	nonsense_mediated_decay		4	1	21776298	3977
ENSMUSG00000040455	protein_coding	Usp45	ENSMUST00000137293	nonsense_mediated_decay		4	1	21781737	5541
ENSMUSG00000022574	protein_coding	Naprt	ENSMUST00000230259	retained_intron		15	-1	75892568	741
ENSMUSG00000040455	protein_coding	Usp45	ENSMUST00000148647	nonsense_mediated_decay		4	1	21784724	626
ENSMUSG00000054659	protein_coding	Pm20d2	ENSMUST00000098181	protein_coding	principal1	4	-1	33189433	1445
ENSMUSG00000091101	protein_coding	Gm4302	ENSMUST00000168769	protein_coding	principal1	10	1	100340836	927
ENSMUSG00000040254	protein_coding	Sema3d	ENSMUST00000030868	protein_coding	principal1	5	1	12383385	6307
ENSMUSG00000113179	antisense	1700030L22Rik	ENSMUST00000222223	antisense		12	-1	53309846	704
ENSMUSG00000099494	lincRNA	Gm28197	ENSMUST00000188434	lincRNA		Y	1	52497006	1499
ENSMUSG00000113179	antisense	1700030L22Rik	ENSMUST00000221214	antisense		12	-1	53309840	567
ENSMUSG00000094314	protein_coding	Gm4301	ENSMUST00000186197	protein_coding	principal1	10	1	100335676	914
ENSMUSG00000054659	protein_coding	Pm20d2	ENSMUST00000119167	protein_coding		4	-1	33189737	1339
ENSMUSG00000034940	protein_coding	Synrg	ENSMUST00000092834	protein_coding	principal2	11	1	83964428	7115
ENSMUSG00000112485	processed_transcript	Gm47631	ENSMUST00000219325	processed_transcript		10	-1	100383831	611
ENSMUSG00000024818	protein_coding	Slc25a45	ENSMUST00000145200	protein_coding		19	1	5877808	1011
ENSMUSG00000112178	processed_pseudogene	Gm47630	ENSMUST00000217916	processed_pseudogene		10	1	100321102	270
ENSMUSG00000053317	protein_coding	Sec61b	ENSMUST00000065678	protein_coding	principal1	4	1	47474658	564
ENSMUSG00000112522	processed_pseudogene	Gm47632	ENSMUST00000218505	processed_pseudogene		10	-1	100320270	3247
ENSMUSG00000112777	unprocessed_pseudogene	Gm8723	ENSMUST00000166076	unprocessed_pseudogene		10	-1	100377279	820
ENSMUSG00000099494	lincRNA	Gm28197	ENSMUST00000185774	lincRNA		Y	1	52497459	438
ENSMUSG00000099494	lincRNA	Gm28197	ENSMUST00000188364	lincRNA		Y	1	52497459	622
ENSMUSG00000049657	protein_coding	Zbtb5	ENSMUST00000107817	protein_coding	principal1	4	-1	45012412	3867
ENSMUSG00000112480	unprocessed_pseudogene	Gm4310	ENSMUST00000177847	unprocessed_pseudogene		10	-1	100372133	889
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000115621	protein_coding	alternative1	X	-1	8145880	1338
ENSMUSG00000099407	antisense	1700060O08Rik	ENSMUST00000185390	antisense		12	-1	54079392	281
ENSMUSG00000112856	protein_coding	Gm4305	ENSMUST00000219159	protein_coding	principal1	10	1	100351093	910
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000039674	protein_coding	principal1	9	-1	37147407	3632
ENSMUSG00000034940	protein_coding	Synrg	ENSMUST00000183714	protein_coding	alternative2	11	1	83964476	3651
ENSMUSG00000040254	protein_coding	Sema3d	ENSMUST00000196618	processed_transcript		5	1	12383506	1808
ENSMUSG00000040254	protein_coding	Sema3d	ENSMUST00000197927	protein_coding		5	1	12383506	3207
ENSMUSG00000049657	protein_coding	Zbtb5	ENSMUST00000131991	protein_coding		4	-1	45012145	872
ENSMUSG00000096640	protein_coding	Gm4312	ENSMUST00000190264	protein_coding	principal1	10	-1	100382560	914
ENSMUSG00000034940	protein_coding	Synrg	ENSMUST00000183456	protein_coding	alternative2	11	1	83964476	3990
ENSMUSG00000040254	protein_coding	Sema3d	ENSMUST00000196093	processed_transcript		5	1	12484955	708
ENSMUSG00000053317	protein_coding	Sec61b	ENSMUST00000137461	protein_coding		4	1	47474764	430
ENSMUSG00000053317	protein_coding	Sec61b	ENSMUST00000125622	protein_coding		4	1	47474808	424
ENSMUSG00000095673	unprocessed_pseudogene	Gm4308	ENSMUST00000179735	unprocessed_pseudogene		10	1	100366499	914
ENSMUSG00000040254	protein_coding	Sema3d	ENSMUST00000195923	processed_transcript		5	1	12575794	4498
ENSMUSG00000053317	protein_coding	Sec61b	ENSMUST00000136685	retained_intron		4	1	47474948	723
ENSMUSG00000049657	protein_coding	Zbtb5	ENSMUST00000180217	protein_coding	principal1	4	-1	45012412	4708
ENSMUSG00000112122	processed_pseudogene	Gm47628	ENSMUST00000220250	processed_pseudogene		10	-1	100321425	1113
ENSMUSG00000034940	protein_coding	Synrg	ENSMUST00000148901	processed_transcript		11	1	83981452	734
ENSMUSG00000104632	TEC	Gm42909	ENSMUST00000196982	TEC		5	1	12554632	3619
ENSMUSG00000034940	protein_coding	Synrg	ENSMUST00000138676	protein_coding		11	1	83982296	767
ENSMUSG00000091552	unprocessed_pseudogene	Gm8711	ENSMUST00000163114	unprocessed_pseudogene		10	1	100356235	883
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000115615	protein_coding	alternative1	X	-1	8145723	1183
ENSMUSG00000112408	unprocessed_pseudogene	Gm8701	ENSMUST00000169259	unprocessed_pseudogene		10	1	100330540	874
ENSMUSG00000105854	processed_pseudogene	Gm8925	ENSMUST00000197212	processed_pseudogene		5	-1	12479628	763
ENSMUSG00000034940	protein_coding	Synrg	ENSMUST00000142966	retained_intron		11	1	83989811	618
ENSMUSG00000117541	antisense	Gm50048	ENSMUST00000234487	antisense		18	1	15403087	2701
ENSMUSG00000028758	protein_coding	Kif17	ENSMUST00000105818	protein_coding		4	1	138250435	3106
ENSMUSG00000094669	protein_coding	Olfr441	ENSMUST00000213649	protein_coding	principal1	6	1	43106369	2402
ENSMUSG00000070997	antisense	1700055D18Rik	ENSMUST00000186030	antisense		4	1	45011687	3720
ENSMUSG00000101633	lincRNA	Gm29839	ENSMUST00000187045	lincRNA		Y	1	39504127	174
ENSMUSG00000094669	protein_coding	Olfr441	ENSMUST00000095954	protein_coding	principal1	6	1	43115744	933
ENSMUSG00000070997	antisense	1700055D18Rik	ENSMUST00000095105	antisense		4	1	45012830	1570
ENSMUSG00000101727	unprocessed_pseudogene	Gm29495	ENSMUST00000189319	unprocessed_pseudogene		Y	1	39589769	664
ENSMUSG00000112801	processed_pseudogene	Gm48034	ENSMUST00000217878	processed_pseudogene		10	-1	33980840	242
ENSMUSG00000102450	TEC	Gm38343	ENSMUST00000195786	TEC		4	-1	47927365	1060
ENSMUSG00000101124	unprocessed_pseudogene	Gm28371	ENSMUST00000186936	unprocessed_pseudogene		Y	-1	39988981	695
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000031490	protein_coding	principal3	5	-1	110810097	5213
ENSMUSG00000034940	protein_coding	Synrg	ENSMUST00000184239	retained_intron		11	1	84019201	1943
ENSMUSG00000108579	lincRNA	Gm29918	ENSMUST00000206036	lincRNA		7	-1	25577798	258
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000175938	nonsense_mediated_decay		9	-1	36987272	1759
ENSMUSG00000034940	protein_coding	Synrg	ENSMUST00000132887	retained_intron		11	1	84026655	578
ENSMUSG00000109108	bidirectional_promoter_lncRNA	Gm36371	ENSMUST00000209043	bidirectional_promoter_lncRNA		7	1	6156516	1103
ENSMUSG00000108579	lincRNA	Gm29918	ENSMUST00000205635	lincRNA		7	-1	25577798	138
ENSMUSG00000066838	protein_coding	Zfp772	ENSMUST00000074455	protein_coding	principal1	7	-1	7209998	2777
ENSMUSG00000075181	protein_coding	Olfr1066	ENSMUST00000099885	protein_coding	principal1	2	-1	86456269	942
ENSMUSG00000085660	lincRNA	Gm12434	ENSMUST00000141580	lincRNA		4	1	47996456	653
ENSMUSG00000117328	antisense	4930474M22Rik	ENSMUST00000233310	antisense		17	-1	14398942	607
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000196094	nonsense_mediated_decay		5	-1	110787945	783
ENSMUSG00000099723	lincRNA	Gm28595	ENSMUST00000186223	lincRNA		Y	1	40104656	437
ENSMUSG00000107889	unprocessed_pseudogene	Olfr440-ps1	ENSMUST00000204044	unprocessed_pseudogene		6	1	43122350	917
ENSMUSG00000102044	unprocessed_pseudogene	Gm21249	ENSMUST00000187380	unprocessed_pseudogene		Y	-1	52608321	696
ENSMUSG00000091019	processed_pseudogene	Gm7502	ENSMUST00000169235	processed_pseudogene		18	1	7932782	733
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000198561	nonsense_mediated_decay		5	-1	110789053	851
ENSMUSG00000108553	lincRNA	Gm38569	ENSMUST00000205476	lincRNA		7	1	25584224	2228
ENSMUSG00000104381	TEC	Gm37032	ENSMUST00000194882	TEC		Y	1	40188895	2975
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000199717	retained_intron		5	-1	110787221	535
ENSMUSG00000099745	unprocessed_pseudogene	Gm28736	ENSMUST00000186257	unprocessed_pseudogene		Y	-1	52638810	615
ENSMUSG00000108149	unprocessed_pseudogene	Olfr439-ps1	ENSMUST00000204679	unprocessed_pseudogene		6	1	43138133	307
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000177080	processed_transcript		9	-1	37083279	1699
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000113512	protein_coding	principal1	1	-1	79761769	4551
ENSMUSG00000108304	processed_pseudogene	Gm4607	ENSMUST00000206649	processed_pseudogene		7	1	25601326	577
ENSMUSG00000028758	protein_coding	Kif17	ENSMUST00000030539	protein_coding	principal3	4	1	138262232	3453
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000200299	protein_coding	alternative2	5	-1	110810053	3581
ENSMUSG00000101883	unprocessed_pseudogene	Gm21840	ENSMUST00000187212	unprocessed_pseudogene		Y	-1	52675613	696
ENSMUSG00000021010	protein_coding	Npas3	ENSMUST00000223358	protein_coding	alternative2	12	1	53248157	3663
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000176562	retained_intron		9	-1	37083279	2029
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000199568	retained_intron		5	-1	110788667	613
ENSMUSG00000028758	protein_coding	Kif17	ENSMUST00000105821	protein_coding	alternative2	4	1	138262472	2271
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000176622	retained_intron		9	-1	37083279	2266
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000177444	protein_coding		9	-1	37083279	611
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000197768	retained_intron		5	-1	110789466	356
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000188348	protein_coding		9	-1	37137567	700
ENSMUSG00000102022	lincRNA	Gm28735	ENSMUST00000188159	lincRNA		Y	1	52717904	1499
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000200099	retained_intron		5	-1	110792192	420
ENSMUSG00000028758	protein_coding	Kif17	ENSMUST00000105820	retained_intron		4	1	138262499	1968
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000188057	protein_coding		9	-1	37147322	439
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000196883	retained_intron		5	-1	110793405	645
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000115617	protein_coding	principal3	X	-1	8145696	1152
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000189294	protein_coding		9	-1	37145660	456
ENSMUSG00000102022	lincRNA	Gm28735	ENSMUST00000188542	lincRNA		Y	1	52718357	622
ENSMUSG00000102022	lincRNA	Gm28735	ENSMUST00000187122	lincRNA		Y	1	52718357	438
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000188433	processed_transcript		9	-1	37147266	406
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000115616	protein_coding	principal3	X	-1	8145773	1225
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000213653	processed_transcript		9	-1	37147306	657
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000215175	retained_intron		9	-1	37145815	2832
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000113513	protein_coding	principal1	1	-1	79761769	4551
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000113515	protein_coding	principal1	1	-1	79761769	4551
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000113514	protein_coding	principal1	1	-1	79761769	4551
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000196440	processed_transcript		5	-1	110795797	675
ENSMUSG00000035934	protein_coding	Pknox2	ENSMUST00000080754	protein_coding	principal1	9	-1	37147314	3431
ENSMUSG00000029512	protein_coding	Ulk1	ENSMUST00000198470	retained_intron		5	-1	110795834	599
ENSMUSG00000020032	protein_coding	Nuak1	ENSMUST00000020220	protein_coding	principal1	10	-1	84440597	5558
ENSMUSG00000021010	protein_coding	Npas3	ENSMUST00000101432	protein_coding	principal2	12	1	53248677	5879
ENSMUSG00000021010	protein_coding	Npas3	ENSMUST00000220986	protein_coding		12	1	53253025	214
ENSMUSG00000093721	antisense	Gm3896	ENSMUST00000176020	antisense		9	1	37015758	4094
ENSMUSG00000020032	protein_coding	Nuak1	ENSMUST00000129355	protein_coding		10	-1	84392388	478
ENSMUSG00000021010	protein_coding	Npas3	ENSMUST00000223057	protein_coding	alternative2	12	1	53253046	2724
ENSMUSG00000044772	protein_coding	Sntn	ENSMUST00000061045	protein_coding	principal1	14	1	13670876	1240
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000187005	nonsense_mediated_decay		1	-1	79761738	1359
ENSMUSG00000079179	antisense	Rab10os	ENSMUST00000178074	antisense		12	1	3235504	4006
ENSMUSG00000111583	bidirectional_promoter_lncRNA	Gm47962	ENSMUST00000214135	bidirectional_promoter_lncRNA		10	1	84440826	834
ENSMUSG00000110722	antisense	Gm48716	ENSMUST00000215174	antisense		9	1	37118656	733
ENSMUSG00000080752	unprocessed_pseudogene	Olfr1069-ps1	ENSMUST00000120755	unprocessed_pseudogene		2	-1	86465075	965
ENSMUSG00000091818	processed_pseudogene	Rpl19-ps4	ENSMUST00000167150	processed_pseudogene		14	-1	13778441	625
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000113510	protein_coding		1	-1	79761769	704
ENSMUSG00000079179	antisense	Rab10os	ENSMUST00000178331	antisense		12	1	3235526	812
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000113511	protein_coding		1	-1	79761769	704
ENSMUSG00000083222	unprocessed_pseudogene	Gm12427	ENSMUST00000117719	unprocessed_pseudogene		3	-1	98820019	302
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000127771	processed_transcript		1	-1	79722656	555
ENSMUSG00000085433	lincRNA	Gm16001	ENSMUST00000127989	lincRNA		5	-1	124112264	875
ENSMUSG00000111300	processed_pseudogene	Rpl26-ps1	ENSMUST00000213139	processed_pseudogene		10	1	43639223	426
ENSMUSG00000082497	unprocessed_pseudogene	Gm40	ENSMUST00000122131	unprocessed_pseudogene		X	1	38375287	660
ENSMUSG00000111575	lincRNA	Gm47926	ENSMUST00000214822	lincRNA		10	-1	43691828	687
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000130714	processed_transcript		1	-1	79730098	555
ENSMUSG00000095730	protein_coding	Vmn2r29	ENSMUST00000170922	protein_coding	principal1	7	-1	7247328	2559
ENSMUSG00000085433	lincRNA	Gm16001	ENSMUST00000143062	lincRNA		5	-1	124112217	987
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000129947	nonsense_mediated_decay		X	-1	8145696	1319
ENSMUSG00000114480	processed_pseudogene	Gm3637	ENSMUST00000225631	processed_pseudogene		14	-1	13792060	1078
ENSMUSG00000028582	protein_coding	Cc2d1b	ENSMUST00000030320	protein_coding	principal1	4	1	108619940	3303
ENSMUSG00000109427	TEC	Gm45845	ENSMUST00000207326	TEC		7	-1	81790319	582
ENSMUSG00000060084	protein_coding	Olfr748	ENSMUST00000213101	protein_coding	principal1	14	1	50707373	3632
ENSMUSG00000095730	protein_coding	Vmn2r29	ENSMUST00000211433	nonsense_mediated_decay		7	-1	7242188	649
ENSMUSG00000060084	protein_coding	Olfr748	ENSMUST00000073561	protein_coding	principal1	14	1	50710332	924
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000130490	processed_transcript		6	1	47943171	4419
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000143368	protein_coding		1	-1	79776143	914
ENSMUSG00000095730	protein_coding	Vmn2r29	ENSMUST00000209613	retained_intron		7	-1	7243705	3066
ENSMUSG00000084902	protein_coding	Gm281	ENSMUST00000144914	protein_coding	principal1	14	-1	13914478	2952
ENSMUSG00000028582	protein_coding	Cc2d1b	ENSMUST00000139962	nonsense_mediated_decay		4	1	108623512	733
ENSMUSG00000075184	lincRNA	F930017D23Rik	ENSMUST00000215599	lincRNA		10	1	43593397	1188
ENSMUSG00000075184	lincRNA	F930017D23Rik	ENSMUST00000213342	lincRNA		10	1	43593397	2141
ENSMUSG00000028582	protein_coding	Cc2d1b	ENSMUST00000134844	protein_coding		4	1	108623563	2917
ENSMUSG00000024818	protein_coding	Slc25a45	ENSMUST00000025732	protein_coding	principal1	19	1	5877817	2480
ENSMUSG00000087574	lincRNA	C030037D09Rik	ENSMUST00000138007	lincRNA		11	1	88718645	3220
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000048820	protein_coding		1	-1	79761769	717
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000114588	retained_intron		6	1	47943195	2733
ENSMUSG00000075184	lincRNA	F930017D23Rik	ENSMUST00000216878	lincRNA		10	1	43593426	452
ENSMUSG00000028582	protein_coding	Cc2d1b	ENSMUST00000150199	retained_intron		4	1	108625755	759
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000141925	retained_intron		X	-1	8145722	1274
ENSMUSG00000075184	lincRNA	F930017D23Rik	ENSMUST00000099888	lincRNA		10	1	43593426	1836
ENSMUSG00000024818	protein_coding	Slc25a45	ENSMUST00000125114	protein_coding		19	1	5877817	2599
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000138319	processed_transcript		1	-1	79730098	555
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000141629	nonsense_mediated_decay		X	-1	8145697	1055
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000144782	retained_intron		6	1	47943203	2873
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000186464	retained_intron		1	-1	79761721	480
ENSMUSG00000028582	protein_coding	Cc2d1b	ENSMUST00000176846	retained_intron		4	1	108626020	611
ENSMUSG00000024818	protein_coding	Slc25a45	ENSMUST00000155697	protein_coding	principal1	19	1	5877826	1960
ENSMUSG00000075184	lincRNA	F930017D23Rik	ENSMUST00000217420	lincRNA		10	1	43593439	406
ENSMUSG00000075184	lincRNA	F930017D23Rik	ENSMUST00000216735	lincRNA		10	1	43623747	1729
ENSMUSG00000020422	protein_coding	Tns3	ENSMUST00000239091	protein_coding	alternative2	11	-1	8624887	7897
ENSMUSG00000073643	protein_coding	Wdfy1	ENSMUST00000125641	protein_coding		1	-1	79762047	460
ENSMUSG00000024818	protein_coding	Slc25a45	ENSMUST00000235340	protein_coding		19	1	5877861	1908
ENSMUSG00000087574	lincRNA	C030037D09Rik	ENSMUST00000136201	lincRNA		11	1	88718804	1216
ENSMUSG00000075184	lincRNA	F930017D23Rik	ENSMUST00000215845	lincRNA		10	1	43706898	372
ENSMUSG00000020422	protein_coding	Tns3	ENSMUST00000239111	protein_coding	principal5	11	-1	8664681	7629
ENSMUSG00000098900	transcribed_unprocessed_pseudogene	Gm18190	ENSMUST00000174801	transcribed_unprocessed_pseudogene		7	-1	7269335	832
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000175808	processed_transcript		6	1	47943208	636
ENSMUSG00000087574	lincRNA	C030037D09Rik	ENSMUST00000125967	lincRNA		11	1	88720489	367
ENSMUSG00000024818	protein_coding	Slc25a45	ENSMUST00000136833	protein_coding		19	1	5878628	379
ENSMUSG00000111565	lincRNA	Gm34481	ENSMUST00000214968	lincRNA		10	1	43659318	3374
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000154259	processed_transcript		6	1	47943208	2586
ENSMUSG00000031167	protein_coding	Rbm3	ENSMUST00000145450	retained_intron		X	-1	8145759	721
ENSMUSG00000111749	lincRNA	Gm47927	ENSMUST00000217559	lincRNA		10	-1	43687302	463
ENSMUSG00000024818	protein_coding	Slc25a45	ENSMUST00000141362	protein_coding		19	1	5878656	483
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000173129	processed_transcript		6	1	47943250	912
ENSMUSG00000006930	protein_coding	Hap1	ENSMUST00000138603	protein_coding	alternative2	11	-1	100356128	3316
ENSMUSG00000097790	processed_pseudogene	Gm16399	ENSMUST00000181423	processed_pseudogene		3	-1	14802574	219
ENSMUSG00000020422	protein_coding	Tns3	ENSMUST00000129074	processed_transcript		11	-1	8468675	847
ENSMUSG00000101984	lincRNA	Gm29436	ENSMUST00000189054	lincRNA		Y	1	88474113	1172
ENSMUSG00000098900	transcribed_unprocessed_pseudogene	Gm18190	ENSMUST00000209485	processed_transcript		7	-1	7278197	725
ENSMUSG00000101984	lincRNA	Gm29436	ENSMUST00000188158	lincRNA		Y	1	88474240	433
ENSMUSG00000020422	protein_coding	Tns3	ENSMUST00000131941	processed_transcript		11	-1	8545351	534
ENSMUSG00000028582	protein_coding	Cc2d1b	ENSMUST00000106665	retained_intron		4	1	108626048	2892
ENSMUSG00000100637	unprocessed_pseudogene	Gm20819	ENSMUST00000191091	unprocessed_pseudogene		Y	1	88534613	925
ENSMUSG00000098900	transcribed_unprocessed_pseudogene	Gm18190	ENSMUST00000209944	processed_transcript		7	-1	7278267	389
ENSMUSG00000028582	protein_coding	Cc2d1b	ENSMUST00000126156	retained_intron		4	1	108629590	729
ENSMUSG00000098900	transcribed_unprocessed_pseudogene	Gm18190	ENSMUST00000210994	processed_transcript		7	-1	7278210	633
ENSMUSG00000028582	protein_coding	Cc2d1b	ENSMUST00000176877	processed_transcript		4	1	108629624	258
ENSMUSG00000006930	protein_coding	Hap1	ENSMUST00000103124	protein_coding	principal3	11	-1	100356087	2120
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000212438	processed_transcript		6	1	47943354	565
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000095946	transcribed_unprocessed_pseudogene		6	1	47945429	1479
ENSMUSG00000020422	protein_coding	Tns3	ENSMUST00000134823	processed_transcript		11	-1	8579121	3500
ENSMUSG00000028582	protein_coding	Cc2d1b	ENSMUST00000143336	retained_intron		4	1	108630450	430
ENSMUSG00000023930	protein_coding	Crisp2	ENSMUST00000232709	protein_coding	principal1	17	-1	40794133	2341
ENSMUSG00000079179	antisense	Rab10os	ENSMUST00000177896	antisense		12	1	3235526	2872
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000156767	processed_transcript		6	1	47945497	1058
ENSMUSG00000023930	protein_coding	Crisp2	ENSMUST00000233529	protein_coding	principal1	17	-1	40794506	1379
ENSMUSG00000006930	protein_coding	Hap1	ENSMUST00000173630	protein_coding		11	-1	100354040	976
ENSMUSG00000023930	protein_coding	Crisp2	ENSMUST00000233679	nonsense_mediated_decay		17	-1	40794102	1506
ENSMUSG00000006930	protein_coding	Hap1	ENSMUST00000174635	protein_coding		11	-1	100351905	465
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000130463	processed_transcript		6	1	47945889	537
ENSMUSG00000026248	protein_coding	Mrpl44	ENSMUST00000027464	protein_coding	principal1	1	1	79776018	1424
ENSMUSG00000020422	protein_coding	Tns3	ENSMUST00000020695	protein_coding		11	-1	8664535	7483
ENSMUSG00000006930	protein_coding	Hap1	ENSMUST00000146878	protein_coding		11	-1	100355383	673
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000135828	processed_transcript		6	1	47945902	523
ENSMUSG00000094156	protein_coding	Sult2a7	ENSMUST00000210034	protein_coding		7	-1	14494230	870
ENSMUSG00000072653	transcribed_unprocessed_pseudogene	Zfp783	ENSMUST00000132381	processed_transcript		6	1	47946671	581
ENSMUSG00000094156	protein_coding	Sult2a7	ENSMUST00000209744	protein_coding		7	-1	14492981	792
ENSMUSG00000026248	protein_coding	Mrpl44	ENSMUST00000189176	retained_intron		1	1	79776116	885
ENSMUSG00000092509	processed_transcript	Gm20394	ENSMUST00000173304	processed_transcript		11	-1	100350889	942
ENSMUSG00000079179	antisense	Rab10os	ENSMUST00000179643	antisense		12	1	3235791	1075
ENSMUSG00000035441	protein_coding	Myo1d	ENSMUST00000041065	protein_coding	principal1	11	-1	80780025	5354
ENSMUSG00000025103	protein_coding	Btbd1	ENSMUST00000026093	protein_coding	principal1	7	-1	81829431	3001
ENSMUSG00000079179	antisense	Rab10os	ENSMUST00000179908	antisense		12	1	3235832	746
ENSMUSG00000062199	protein_coding	Olfr1465	ENSMUST00000207340	protein_coding	principal1	19	-1	13315541	1561
ENSMUSG00000000817	protein_coding	Fasl	ENSMUST00000000834	protein_coding	principal1	1	-1	161788495	1937
ENSMUSG00000023886	protein_coding	Smoc2	ENSMUST00000024660	protein_coding	principal1	17	1	14279506	2832
ENSMUSG00000079179	antisense	Rab10os	ENSMUST00000179924	antisense		12	1	3235915	823
ENSMUSG00000023930	protein_coding	Crisp2	ENSMUST00000024724	protein_coding	principal1	17	-1	40794115	1438
ENSMUSG00000104497	TEC	Gm10555	ENSMUST00000193178	TEC		1	1	79762717	1791
ENSMUSG00000094156	protein_coding	Sult2a7	ENSMUST00000211740	protein_coding	alternative2	7	-1	14492971	942
ENSMUSG00000062199	protein_coding	Olfr1465	ENSMUST00000080142	protein_coding	principal1	19	-1	13314283	924
ENSMUSG00000035441	protein_coding	Myo1d	ENSMUST00000070997	protein_coding		11	-1	80780025	3106
ENSMUSG00000094156	protein_coding	Sult2a7	ENSMUST00000108524	protein_coding	principal2	7	-1	14492926	897
ENSMUSG00000025103	protein_coding	Btbd1	ENSMUST00000208114	processed_transcript		7	-1	81800493	556
ENSMUSG00000023886	protein_coding	Smoc2	ENSMUST00000233344	protein_coding		17	1	14279537	2817
ENSMUSG00000000817	protein_coding	Fasl	ENSMUST00000193648	protein_coding		1	-1	161788358	406
ENSMUSG00000079179	antisense	Rab10os	ENSMUST00000049684	antisense		12	1	3236611	778
ENSMUSG00000117724	processed_pseudogene	Gm50231	ENSMUST00000235797	processed_pseudogene		18	1	49328255	259
ENSMUSG00000023930	protein_coding	Crisp2	ENSMUST00000144243	protein_coding		17	-1	40794146	758
ENSMUSG00000101850	unprocessed_pseudogene	Gm29437	ENSMUST00000185865	unprocessed_pseudogene		Y	-1	88621850	696
ENSMUSG00000081473	processed_pseudogene	Gm4853	ENSMUST00000119359	processed_pseudogene		X	1	38396935	394
ENSMUSG00000025103	protein_coding	Btbd1	ENSMUST00000208178	retained_intron		7	-1	81815955	793
ENSMUSG00000023886	protein_coding	Smoc2	ENSMUST00000233540	retained_intron		17	1	14279544	3972
ENSMUSG00000101107	lincRNA	Gm28587	ENSMUST00000187181	lincRNA		Y	-1	873309	3005
ENSMUSG00000023930	protein_coding	Crisp2	ENSMUST00000131699	protein_coding		17	-1	40794076	538
ENSMUSG00000082185	processed_pseudogene	Gm12428	ENSMUST00000119844	processed_pseudogene		3	1	98821038	727
ENSMUSG00000035441	protein_coding	Myo1d	ENSMUST00000125944	retained_intron		11	-1	80780003	2454
ENSMUSG00000025103	protein_coding	Btbd1	ENSMUST00000208566	processed_transcript		7	-1	81829055	335
ENSMUSG00000096485	protein_coding	Olfr1466	ENSMUST00000207124	protein_coding	principal1	19	1	13338862	1981
ENSMUSG00000023930	protein_coding	Crisp2	ENSMUST00000141204	processed_transcript		17	-1	40794067	449
ENSMUSG00000023886	protein_coding	Smoc2	ENSMUST00000232923	protein_coding		17	1	14279559	588
ENSMUSG00000096485	protein_coding	Olfr1466	ENSMUST00000075868	protein_coding	principal1	19	1	13341760	933
ENSMUSG00000059069	protein_coding	Olfr749	ENSMUST00000214290	protein_coding	principal1	14	-1	50745094	1330
ENSMUSG00000054497	protein_coding	Tas2r130	ENSMUST00000067597	protein_coding	principal1	6	-1	131630912	1090
ENSMUSG00000023930	protein_coding	Crisp2	ENSMUST00000124399	processed_transcript		17	-1	40807003	334
ENSMUSG00000059069	protein_coding	Olfr749	ENSMUST00000074674	protein_coding	principal1	14	-1	50744319	1016
ENSMUSG00000114999	processed_pseudogene	Gm7962	ENSMUST00000227053	processed_pseudogene		15	-1	3219698	2308
ENSMUSG00000023886	protein_coding	Smoc2	ENSMUST00000233526	processed_transcript		17	1	14398985	572
ENSMUSG00000108965	processed_pseudogene	Gm44551	ENSMUST00000208804	processed_pseudogene		7	-1	99725378	171
ENSMUSG00000106665	TEC	Gm43389	ENSMUST00000196080	TEC		5	1	24153294	2595
ENSMUSG00000062121	protein_coding	Olfr149	ENSMUST00000215192	protein_coding	principal1	9	-1	39707117	2806
ENSMUSG00000041135	protein_coding	Ripk2	ENSMUST00000037035	protein_coding	principal1	4	-1	16163647	2692
ENSMUSG00000023886	protein_coding	Smoc2	ENSMUST00000232936	processed_transcript		17	1	14399240	521
ENSMUSG00000100297	lincRNA	1700044K03Rik	ENSMUST00000190201	lincRNA		18	1	49523289	377
ENSMUSG00000082089	unprocessed_pseudogene	Gm12431	ENSMUST00000120693	unprocessed_pseudogene		3	-1	98843038	168
ENSMUSG00000106133	processed_pseudogene	Gm3724	ENSMUST00000197957	processed_pseudogene		5	-1	24118664	349
ENSMUSG00000023886	protein_coding	Smoc2	ENSMUST00000233686	processed_transcript		17	1	14400786	337
ENSMUSG00000062121	protein_coding	Olfr149	ENSMUST00000082027	protein_coding	principal1	9	-1	39702822	1030
ENSMUSG00000049015	protein_coding	Olfr1467	ENSMUST00000215096	protein_coding	principal1	19	1	13362236	3671
ENSMUSG00000053389	protein_coding	Tas2r107	ENSMUST00000065781	protein_coding	principal1	6	-1	131660149	1032
ENSMUSG00000103625	TEC	Gm37357	ENSMUST00000192386	TEC		1	-1	161814167	3123
ENSMUSG00000049015	protein_coding	Olfr1467	ENSMUST00000054687	protein_coding	principal1	19	1	13364630	927
ENSMUSG00000041135	protein_coding	Ripk2	ENSMUST00000183871	nonsense_mediated_decay		4	-1	16163643	2804
ENSMUSG00000082589	processed_pseudogene	Gm12433	ENSMUST00000119659	processed_pseudogene		3	1	98846506	255
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000238946	protein_coding		18	-1	15400002	4895
ENSMUSG00000083577	processed_pseudogene	Gm12432	ENSMUST00000119540	processed_pseudogene		3	-1	98846524	186
ENSMUSG00000110105	protein_coding	Gm45844	ENSMUST00000209833	protein_coding	alternative2	7	-1	7278232	1524
ENSMUSG00000117428	processed_pseudogene	Gm4833	ENSMUST00000235002	processed_pseudogene		18	1	8051203	790
ENSMUSG00000103686	lincRNA	Gm37073	ENSMUST00000192469	lincRNA		1	1	165721556	1222
ENSMUSG00000029112	protein_coding	Nkx1-1	ENSMUST00000173348	protein_coding	principal1	5	-1	33433976	1209
ENSMUSG00000073998	protein_coding	Olfr520	ENSMUST00000220185	protein_coding	principal1	7	1	99730273	1330
ENSMUSG00000034653	protein_coding	Ythdc2	ENSMUST00000037763	protein_coding	principal1	18	1	44827746	7215
ENSMUSG00000110105	protein_coding	Gm45844	ENSMUST00000209325	protein_coding	alternative2	7	-1	7278289	2450
ENSMUSG00000025102	protein_coding	3110040N11Rik	ENSMUST00000026092	protein_coding	principal1	7	-1	81789478	887
ENSMUSG00000073998	protein_coding	Olfr520	ENSMUST00000098264	protein_coding	principal1	7	1	99735145	951
ENSMUSG00000084773	lincRNA	Gm12159	ENSMUST00000143869	lincRNA		11	-1	45116928	1447
ENSMUSG00000117490	lincRNA	Gm35031	ENSMUST00000234784	lincRNA		18	1	8180579	2128
ENSMUSG00000034653	protein_coding	Ythdc2	ENSMUST00000201099	retained_intron		18	1	44847880	1327
ENSMUSG00000117490	lincRNA	Gm35031	ENSMUST00000234300	lincRNA		18	1	8183267	597
ENSMUSG00000024664	protein_coding	Fads3	ENSMUST00000115995	protein_coding	principal1	19	1	10041569	3687
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000079081	protein_coding	principal2	18	-1	15403758	5054
ENSMUSG00000110105	protein_coding	Gm45844	ENSMUST00000210333	protein_coding	principal5	7	-1	7267276	3861
ENSMUSG00000027556	protein_coding	Car1	ENSMUST00000181860	protein_coding	principal1	3	-1	14808365	1194
ENSMUSG00000109544	polymorphic_pseudogene	Olfr1468-ps1	ENSMUST00000207287	polymorphic_pseudogene	principal1	19	1	13371854	1208
ENSMUSG00000117385	processed_pseudogene	Gm20147	ENSMUST00000234783	processed_pseudogene		18	-1	8228006	493
ENSMUSG00000110105	protein_coding	Gm45844	ENSMUST00000173842	protein_coding	alternative2	7	-1	7267280	451
ENSMUSG00000034653	protein_coding	Ythdc2	ENSMUST00000201507	nonsense_mediated_decay		18	1	44855045	4290
ENSMUSG00000057754	protein_coding	Tas2r106	ENSMUST00000076756	protein_coding	principal1	6	-1	131678886	927
ENSMUSG00000110105	protein_coding	Gm45844	ENSMUST00000209788	processed_transcript		7	-1	7278210	412
ENSMUSG00000034653	protein_coding	Ythdc2	ENSMUST00000202176	retained_intron		18	1	44855235	434
ENSMUSG00000105237	processed_pseudogene	Gm42580	ENSMUST00000197223	processed_pseudogene		5	-1	12670728	753
ENSMUSG00000117484	processed_pseudogene	Gm5500	ENSMUST00000234117	processed_pseudogene		18	1	8415129	919
ENSMUSG00000010086	protein_coding	Rnf112	ENSMUST00000060255	protein_coding		11	-1	61454005	3161
ENSMUSG00000117424	processed_pseudogene	Gm35232	ENSMUST00000234206	processed_pseudogene		18	1	8679051	242
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000202389	protein_coding	alternative2	11	1	61956815	3363
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000202869	processed_transcript		11	1	61976118	406
ENSMUSG00000024664	protein_coding	Fads3	ENSMUST00000235562	retained_intron		19	1	10041665	1830
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000201624	protein_coding		11	1	62005350	2518
ENSMUSG00000024664	protein_coding	Fads3	ENSMUST00000237672	protein_coding		19	1	10041732	1152
ENSMUSG00000027556	protein_coding	Car1	ENSMUST00000094365	protein_coding	principal1	3	-1	14778459	1180
ENSMUSG00000092097	processed_pseudogene	Gm5819	ENSMUST00000171469	processed_pseudogene		18	1	8694099	439
ENSMUSG00000074261	protein_coding	Erich4	ENSMUST00000098663	protein_coding	alternative2	7	-1	25615892	911
ENSMUSG00000024664	protein_coding	Fads3	ENSMUST00000235185	processed_transcript		19	1	10052951	515
ENSMUSG00000027556	protein_coding	Car1	ENSMUST00000144327	protein_coding		3	-1	14808368	367
ENSMUSG00000025102	protein_coding	3110040N11Rik	ENSMUST00000141075	processed_transcript		7	-1	81788664	451
ENSMUSG00000038292	protein_coding	Ccdc155	ENSMUST00000121017	protein_coding	principal1	7	-1	45204892	2262
ENSMUSG00000083725	processed_pseudogene	Gm11865	ENSMUST00000118093	processed_pseudogene		4	1	16246269	859
ENSMUSG00000022696	protein_coding	Sidt1	ENSMUST00000136381	protein_coding	principal3	16	-1	44332991	4404
ENSMUSG00000074261	protein_coding	Erich4	ENSMUST00000238895	protein_coding	principal2	7	-1	25615892	910
ENSMUSG00000024664	protein_coding	Fads3	ENSMUST00000237226	protein_coding		19	1	10056252	411
ENSMUSG00000042678	protein_coding	Myo15	ENSMUST00000071880	protein_coding	principal4	11	1	60469339	11769
ENSMUSG00000085646	lincRNA	Gm11493	ENSMUST00000134567	lincRNA		11	-1	88743369	566
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000234466	protein_coding	alternative1	18	-1	15408088	1106
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000049836	protein_coding		11	1	62018848	6091
ENSMUSG00000081320	processed_pseudogene	Gm15034	ENSMUST00000120043	processed_pseudogene		X	1	49158223	349
ENSMUSG00000108359	TEC	C430039J01Rik	ENSMUST00000205973	TEC		7	-1	116410803	957
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000202905	protein_coding	alternative2	11	1	62018864	3841
ENSMUSG00000081613	processed_pseudogene	Gm12109	ENSMUST00000121140	processed_pseudogene		11	1	32185005	697
ENSMUSG00000042678	protein_coding	Myo15	ENSMUST00000081823	protein_coding	alternative2	11	1	60469339	7953
ENSMUSG00000025102	protein_coding	3110040N11Rik	ENSMUST00000142557	processed_transcript		7	-1	81789469	405
ENSMUSG00000108500	TEC	Gm45033	ENSMUST00000206710	TEC		7	-1	116399717	3167
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000201364	protein_coding	principal4	11	1	62029253	4955
ENSMUSG00000108738	antisense	Gm44777	ENSMUST00000206930	antisense		7	1	116334255	571
ENSMUSG00000045555	protein_coding	Mettl24	ENSMUST00000058747	protein_coding	principal1	10	1	40683282	1529
ENSMUSG00000085112	processed_transcript	A530072M11Rik	ENSMUST00000151122	processed_transcript		4	1	16164110	1852
ENSMUSG00000025102	protein_coding	3110040N11Rik	ENSMUST00000154937	processed_transcript		7	-1	81789109	497
ENSMUSG00000038292	protein_coding	Ccdc155	ENSMUST00000211277	retained_intron		7	-1	45190066	480
ENSMUSG00000042678	protein_coding	Myo15	ENSMUST00000094135	protein_coding	alternative2	11	1	60469339	11715
ENSMUSG00000022696	protein_coding	Sidt1	ENSMUST00000047446	protein_coding	alternative2	16	-1	44333196	4279
ENSMUSG00000108738	antisense	Gm44777	ENSMUST00000205941	antisense		7	1	116334262	4052
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000234624	retained_intron		18	-1	15409494	1218
ENSMUSG00000110382	lincRNA	Gm29895	ENSMUST00000211010	lincRNA		8	1	78044010	4114
ENSMUSG00000096810	processed_pseudogene	Gm10481	ENSMUST00000179228	processed_pseudogene		5	-1	13043434	1002
ENSMUSG00000110382	lincRNA	Gm29895	ENSMUST00000209933	lincRNA		8	1	78044010	5652
ENSMUSG00000027871	protein_coding	Hsd3b1	ENSMUST00000107016	protein_coding	principal1	3	-1	98859794	1855
ENSMUSG00000103172	TEC	Gm37148	ENSMUST00000195097	TEC		18	1	8928235	716
ENSMUSG00000107248	lincRNA	Gm43851	ENSMUST00000200726	lincRNA		5	-1	33437464	327
ENSMUSG00000108738	antisense	Gm44777	ENSMUST00000206492	antisense		7	1	116336004	1889
ENSMUSG00000025102	protein_coding	3110040N11Rik	ENSMUST00000152620	nonsense_mediated_decay		7	-1	81789465	504
ENSMUSG00000042678	protein_coding	Myo15	ENSMUST00000126522	protein_coding		11	1	60479915	5351
ENSMUSG00000022696	protein_coding	Sidt1	ENSMUST00000127124	retained_intron		16	-1	44281839	746
ENSMUSG00000117549	processed_pseudogene	Gm7523	ENSMUST00000234292	processed_pseudogene		18	1	8967744	1053
ENSMUSG00000042678	protein_coding	Myo15	ENSMUST00000238401	protein_coding		11	1	60480345	360
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000092415	protein_coding	alternative2	11	1	62076995	6797
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000049128	protein_coding		16	1	56075464	1130
ENSMUSG00000027871	protein_coding	Hsd3b1	ENSMUST00000029465	protein_coding	principal1	3	-1	98859794	1663
ENSMUSG00000109485	antisense	Gm45016	ENSMUST00000208375	antisense		7	1	81789477	396
ENSMUSG00000087089	lincRNA	Gm12160	ENSMUST00000146372	lincRNA		11	1	45160943	342
ENSMUSG00000022696	protein_coding	Sidt1	ENSMUST00000147032	protein_coding		16	-1	44282498	404
ENSMUSG00000103248	TEC	Gm38087	ENSMUST00000193653	TEC		11	-1	45189872	265
ENSMUSG00000108881	processed_pseudogene	Gm44849	ENSMUST00000207595	processed_pseudogene		19	1	13403157	484
ENSMUSG00000022696	protein_coding	Sidt1	ENSMUST00000124651	processed_transcript		16	-1	44332541	517
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000235044	protein_coding	alternative1	18	-1	15410982	1511
ENSMUSG00000010086	protein_coding	Rnf112	ENSMUST00000054927	protein_coding		11	-1	61454005	3086
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000234518	protein_coding	alternative1	18	-1	15410982	1197
ENSMUSG00000104099	TEC	Gm37312	ENSMUST00000195753	TEC		11	-1	45296390	685
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000234391	protein_coding	alternative1	18	-1	15410982	1327
ENSMUSG00000080981	processed_pseudogene	Gm12161	ENSMUST00000121454	processed_pseudogene		11	-1	45280954	361
ENSMUSG00000096687	protein_coding	Mfsd4b4	ENSMUST00000178045	protein_coding	principal1	10	-1	39899215	3990
ENSMUSG00000042678	protein_coding	Myo15	ENSMUST00000122825	retained_intron		11	1	60509534	2285
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000201015	protein_coding	alternative2	11	1	62076999	1789
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000234473	protein_coding	alternative1	18	-1	15410982	1221
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000234053	protein_coding	alternative1	18	-1	15410982	1275
ENSMUSG00000100198	lincRNA	1700030O20Rik	ENSMUST00000185546	lincRNA		10	-1	116729177	594
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000200742	retained_intron		11	1	62077045	1277
ENSMUSG00000038462	protein_coding	Uqcrfs1	ENSMUST00000042834	protein_coding	principal1	13	-1	30545362	1363
ENSMUSG00000063777	protein_coding	Olfr1469	ENSMUST00000216910	protein_coding	principal1	19	1	13407849	4106
ENSMUSG00000010086	protein_coding	Rnf112	ENSMUST00000102661	protein_coding	principal1	11	-1	61454106	3118
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000202744	protein_coding		11	1	62077059	674
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000234643	protein_coding	alternative1	18	-1	15402999	1288
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000201723	protein_coding		11	1	62077091	2690
ENSMUSG00000063777	protein_coding	Olfr1469	ENSMUST00000077538	protein_coding	principal1	19	1	13410571	930
ENSMUSG00000112924	lincRNA	4930579P08Rik	ENSMUST00000218193	lincRNA		10	1	116729253	1227
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000234533	protein_coding		18	-1	15410929	453
ENSMUSG00000083064	processed_pseudogene	Gm7785	ENSMUST00000117121	processed_pseudogene		1	1	91296045	892
ENSMUSG00000096687	protein_coding	Mfsd4b4	ENSMUST00000178563	protein_coding		10	-1	39899238	3528
ENSMUSG00000024411	protein_coding	Aqp4	ENSMUST00000234140	retained_intron		18	-1	15400002	902
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000202179	protein_coding	alternative2	11	1	62077097	6676
ENSMUSG00000093895	protein_coding	Gm21865	ENSMUST00000191443	protein_coding	principal1	Y	-1	40316903	923
ENSMUSG00000033632	protein_coding	AW554918	ENSMUST00000159605	nonsense_mediated_decay		18	1	25168999	1582
ENSMUSG00000093895	protein_coding	Gm21865	ENSMUST00000177713	protein_coding		Y	-1	40315451	498
ENSMUSG00000034686	protein_coding	Prr7	ENSMUST00000046533	protein_coding	principal1	13	1	55464267	1359
ENSMUSG00000096687	protein_coding	Mfsd4b4	ENSMUST00000239131	processed_transcript		10	-1	39899169	453
ENSMUSG00000042367	protein_coding	Gjb3	ENSMUST00000106091	protein_coding	principal1	4	-1	127329161	1623
ENSMUSG00000112280	processed_transcript	A830082N09Rik	ENSMUST00000218182	retained_intron		10	-1	33995055	7840
ENSMUSG00000117483	processed_pseudogene	Gm18526	ENSMUST00000234425	processed_pseudogene		18	-1	9100255	548
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000026560	protein_coding	principal1	7	1	140881968	1989
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000108709	protein_coding	alternative2	11	1	62029276	6843
ENSMUSG00000096687	protein_coding	Mfsd4b4	ENSMUST00000239084	processed_transcript		10	-1	39898510	438
ENSMUSG00000042331	protein_coding	Specc1	ENSMUST00000201671	protein_coding		11	1	61956763	2523
ENSMUSG00000112280	processed_transcript	A830082N09Rik	ENSMUST00000217778	lincRNA		10	-1	33989295	1412
ENSMUSG00000104577	processed_pseudogene	Gm6641	ENSMUST00000196100	processed_pseudogene		5	1	13080828	1315
ENSMUSG00000112280	processed_transcript	A830082N09Rik	ENSMUST00000164429	processed_transcript		10	-1	33995054	66
ENSMUSG00000108487	unprocessed_pseudogene	Cyp2a21-ps	ENSMUST00000206638	unprocessed_pseudogene		7	1	26917381	1471
ENSMUSG00000100708	protein_coding	Gm21173	ENSMUST00000189238	protein_coding	principal1	Y	1	76761600	923
ENSMUSG00000094200	protein_coding	Olfr237	ENSMUST00000215911	protein_coding	principal1	6	1	43146567	4220
ENSMUSG00000086263	lincRNA	4930519D14Rik	ENSMUST00000151471	lincRNA		13	1	30615043	1137
ENSMUSG00000094200	protein_coding	Olfr237	ENSMUST00000216411	protein_coding	principal1	6	1	43146567	4115
ENSMUSG00000100043	lincRNA	Gm29433	ENSMUST00000191241	lincRNA		Y	1	40367506	253
ENSMUSG00000083887	processed_pseudogene	Gm11930	ENSMUST00000117788	processed_pseudogene		4	1	33201764	190
ENSMUSG00000042367	protein_coding	Gjb3	ENSMUST00000046532	protein_coding	principal1	4	-1	127330844	1880
ENSMUSG00000010086	protein_coding	Rnf112	ENSMUST00000152137	processed_transcript		11	-1	61454131	1001
ENSMUSG00000101238	unprocessed_pseudogene	Gm28123	ENSMUST00000189725	unprocessed_pseudogene		Y	-1	76849876	696
ENSMUSG00000091867	protein_coding	Cyp2a22	ENSMUST00000206957	retained_intron		7	-1	26939384	3445
ENSMUSG00000094200	protein_coding	Olfr237	ENSMUST00000095953	protein_coding	principal1	6	1	43153262	1000
ENSMUSG00000105106	lincRNA	Gm43657	ENSMUST00000200336	lincRNA		5	-1	22404718	3833
ENSMUSG00000010086	protein_coding	Rnf112	ENSMUST00000126859	processed_transcript		11	-1	61453919	758
ENSMUSG00000099786	lincRNA	Gm29215	ENSMUST00000188659	lincRNA		Y	-1	40370075	621
ENSMUSG00000099786	lincRNA	Gm29215	ENSMUST00000186607	lincRNA		Y	-1	40370075	436
ENSMUSG00000053205	protein_coding	Styx	ENSMUST00000226873	protein_coding	principal1	14	1	45351093	12974
ENSMUSG00000010086	protein_coding	Rnf112	ENSMUST00000136966	processed_transcript		11	-1	61453942	425
ENSMUSG00000071481	protein_coding	Olfr437	ENSMUST00000205175	protein_coding	principal1	6	1	43163282	2952
ENSMUSG00000010086	protein_coding	Rnf112	ENSMUST00000130648	processed_transcript		11	-1	61453933	882
ENSMUSG00000086450	antisense	Macrod2os1	ENSMUST00000151538	antisense		2	-1	141286991	3131
ENSMUSG00000071481	protein_coding	Olfr437	ENSMUST00000060243	protein_coding	principal1	6	1	43167010	1018
ENSMUSG00000036904	protein_coding	Fzd8	ENSMUST00000041080	protein_coding	principal1	18	1	9212163	5974
ENSMUSG00000083274	processed_pseudogene	Zcchc9-ps	ENSMUST00000117884	processed_pseudogene		2	1	141127280	786
ENSMUSG00000044827	protein_coding	Tlr1	ENSMUST00000197315	protein_coding	principal1	5	-1	64933561	3025
ENSMUSG00000020374	protein_coding	Rasgef1c	ENSMUST00000093141	protein_coding		11	1	49901835	2120
ENSMUSG00000033632	protein_coding	AW554918	ENSMUST00000036619	protein_coding	principal5	18	1	25169010	5257
ENSMUSG00000062038	processed_pseudogene	Gm10108	ENSMUST00000078246	processed_pseudogene		5	-1	13121766	319
ENSMUSG00000054679	protein_coding	Srsf12	ENSMUST00000067864	protein_coding	principal1	4	1	33208991	2939
ENSMUSG00000103595	TEC	Gm37355	ENSMUST00000193345	TEC		4	1	16384052	606
ENSMUSG00000091867	protein_coding	Cyp2a22	ENSMUST00000170227	protein_coding	principal1	7	-1	26939380	1796
ENSMUSG00000108731	processed_pseudogene	Api5-ps	ENSMUST00000206607	processed_pseudogene		7	-1	26919352	577
ENSMUSG00000054679	protein_coding	Srsf12	ENSMUST00000108159	protein_coding		4	1	33209263	829
ENSMUSG00000095725	lincRNA	Gm21801	ENSMUST00000185537	lincRNA		Y	-1	40391449	174
ENSMUSG00000095725	lincRNA	Gm21801	ENSMUST00000178865	lincRNA		Y	-1	40391443	498
ENSMUSG00000100406	processed_pseudogene	Gm28120	ENSMUST00000188812	processed_pseudogene		Y	-1	76886590	315
ENSMUSG00000020374	protein_coding	Rasgef1c	ENSMUST00000093142	protein_coding	principal3	11	1	49901855	2216
ENSMUSG00000085476	lincRNA	Gm12162	ENSMUST00000129432	lincRNA		11	-1	45420784	127
ENSMUSG00000080065	processed_pseudogene	Gm11864	ENSMUST00000116179	processed_pseudogene		4	-1	16391664	1220
ENSMUSG00000085476	lincRNA	Gm12162	ENSMUST00000123422	lincRNA		11	-1	45468504	154
ENSMUSG00000105081	processed_pseudogene	Gm43110	ENSMUST00000198877	processed_pseudogene		5	-1	22472992	226
ENSMUSG00000033632	protein_coding	AW554918	ENSMUST00000161262	processed_transcript		18	1	25169014	1021
ENSMUSG00000038973	protein_coding	Cldnd2	ENSMUST00000040227	protein_coding	principal1	7	1	43440782	664
ENSMUSG00000081851	processed_pseudogene	Gm13323	ENSMUST00000120245	processed_pseudogene		2	-1	17797984	1151
ENSMUSG00000109230	unprocessed_pseudogene	Olfr1470-ps1	ENSMUST00000208620	unprocessed_pseudogene		19	-1	13435095	949
ENSMUSG00000033632	protein_coding	AW554918	ENSMUST00000162149	processed_transcript		18	1	25169020	1427
ENSMUSG00000044827	protein_coding	Tlr1	ENSMUST00000059349	protein_coding	principal1	5	-1	64932761	2783
ENSMUSG00000028857	protein_coding	Tmem222	ENSMUST00000105907	protein_coding	principal1	4	-1	133277792	1484
ENSMUSG00000020374	protein_coding	Rasgef1c	ENSMUST00000063444	protein_coding	alternative2	11	1	49902161	3378
ENSMUSG00000053205	protein_coding	Styx	ENSMUST00000226785	nonsense_mediated_decay		14	1	45351177	4168
ENSMUSG00000033632	protein_coding	AW554918	ENSMUST00000160530	nonsense_mediated_decay		18	1	25169023	1828
ENSMUSG00000053205	protein_coding	Styx	ENSMUST00000228818	protein_coding		14	1	45351222	451
ENSMUSG00000038973	protein_coding	Cldnd2	ENSMUST00000206839	protein_coding	principal1	7	1	43441576	583
ENSMUSG00000081251	processed_pseudogene	Gm12164	ENSMUST00000121695	processed_pseudogene		11	1	45829319	551
ENSMUSG00000033632	protein_coding	AW554918	ENSMUST00000100131	processed_transcript		18	1	25233915	1675
ENSMUSG00000083017	processed_pseudogene	Gm12163	ENSMUST00000121597	processed_pseudogene		11	1	45813604	389
ENSMUSG00000062651	protein_coding	H2al2a	ENSMUST00000105001	protein_coding	principal1	2	-1	17996958	542
ENSMUSG00000044827	protein_coding	Tlr1	ENSMUST00000197886	processed_transcript		5	-1	64933563	419
ENSMUSG00000024678	protein_coding	Ms4a4d	ENSMUST00000025581	protein_coding	principal1	19	1	11536801	1513
ENSMUSG00000036855	protein_coding	Gjd4	ENSMUST00000041007	protein_coding	principal1	18	-1	9282809	2661
ENSMUSG00000032679	protein_coding	Cd59a	ENSMUST00000040423	protein_coding	principal1	2	1	104095801	1691
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000130664	protein_coding		6	1	149309414	1957
ENSMUSG00000020374	protein_coding	Rasgef1c	ENSMUST00000109172	processed_transcript		11	1	49963785	641
ENSMUSG00000107069	transcribed_processed_pseudogene	Gm43772	ENSMUST00000202052	transcribed_processed_pseudogene		5	-1	66175343	379
ENSMUSG00000053205	protein_coding	Styx	ENSMUST00000226303	nonsense_mediated_decay		14	1	45351222	1730
ENSMUSG00000038784	protein_coding	Cnot4	ENSMUST00000202143	protein_coding	alternative1	6	-1	35133625	3202
ENSMUSG00000086072	lincRNA	Gm11861	ENSMUST00000141571	lincRNA		4	1	16464876	382
ENSMUSG00000086686	processed_transcript	F630206G17Rik	ENSMUST00000137002	processed_transcript		11	1	45808087	685
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000151644	retained_intron		7	1	140882414	1391
ENSMUSG00000099526	lincRNA	Gm29313	ENSMUST00000187866	lincRNA		Y	1	76923339	1500
ENSMUSG00000053205	protein_coding	Styx	ENSMUST00000111835	nonsense_mediated_decay		14	1	45351227	1245
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000140411	retained_intron		7	1	140882429	599
ENSMUSG00000028857	protein_coding	Tmem222	ENSMUST00000137622	nonsense_mediated_decay		4	-1	133277662	537
ENSMUSG00000097092	antisense	Gm26725	ENSMUST00000180652	antisense		5	1	66151212	1113
ENSMUSG00000099526	lincRNA	Gm29313	ENSMUST00000189699	lincRNA		Y	1	76923792	438
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000129683	retained_intron		7	1	140882452	831
ENSMUSG00000033632	protein_coding	AW554918	ENSMUST00000165400	protein_coding	alternative2	18	1	25169020	5351
ENSMUSG00000107390	TEC	Gm43323	ENSMUST00000202328	TEC		5	-1	66084466	4258
ENSMUSG00000033632	protein_coding	AW554918	ENSMUST00000097643	protein_coding	alternative2	18	1	25169020	5351
ENSMUSG00000053205	protein_coding	Styx	ENSMUST00000226603	nonsense_mediated_decay		14	1	45351239	1889
ENSMUSG00000096320	protein_coding	Olfr1471	ENSMUST00000213460	processed_transcript		19	1	13443526	1466
ENSMUSG00000028857	protein_coding	Tmem222	ENSMUST00000139030	nonsense_mediated_decay		4	-1	133277770	546
ENSMUSG00000081116	processed_pseudogene	Gm13329	ENSMUST00000117063	processed_pseudogene		2	-1	17998505	265
ENSMUSG00000096320	protein_coding	Olfr1471	ENSMUST00000213561	processed_transcript		19	1	13443526	3193
ENSMUSG00000032679	protein_coding	Cd59a	ENSMUST00000153312	processed_transcript		2	1	104095840	681
ENSMUSG00000100900	lincRNA	Gm28850	ENSMUST00000189058	lincRNA		Y	-1	40434282	622
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000163610	protein_coding		7	1	140882464	1382
ENSMUSG00000089908	processed_pseudogene	Gm16558	ENSMUST00000163015	processed_pseudogene		18	1	25391801	532
ENSMUSG00000100900	lincRNA	Gm28850	ENSMUST00000189274	lincRNA		Y	-1	40434282	437
ENSMUSG00000096320	protein_coding	Olfr1471	ENSMUST00000217249	protein_coding	principal1	19	1	13443572	1662
ENSMUSG00000053205	protein_coding	Styx	ENSMUST00000228311	nonsense_mediated_decay		14	1	45351242	2107
ENSMUSG00000117644	processed_pseudogene	Gm50053	ENSMUST00000234891	processed_pseudogene		18	1	9304635	446
ENSMUSG00000032679	protein_coding	Cd59a	ENSMUST00000168176	protein_coding	principal1	2	1	104095801	1806
ENSMUSG00000096320	protein_coding	Olfr1471	ENSMUST00000217482	protein_coding	principal1	19	1	13443409	1545
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000146875	retained_intron		7	1	140882467	797
ENSMUSG00000107014	antisense	1700126H18Rik	ENSMUST00000201903	antisense		5	-1	66191336	405
ENSMUSG00000100560	unprocessed_pseudogene	Gm21180	ENSMUST00000187388	unprocessed_pseudogene		Y	-1	77074728	696
ENSMUSG00000083229	processed_pseudogene	Gm11862	ENSMUST00000119678	processed_pseudogene		4	1	16714944	659
ENSMUSG00000034295	protein_coding	Fhod3	ENSMUST00000234462	retained_intron		18	1	24708623	2312
ENSMUSG00000096320	protein_coding	Olfr1471	ENSMUST00000096203	protein_coding	principal1	19	1	13445014	945
ENSMUSG00000028857	protein_coding	Tmem222	ENSMUST00000134781	nonsense_mediated_decay		4	-1	133277618	613
ENSMUSG00000053205	protein_coding	Styx	ENSMUST00000227538	retained_intron		14	1	45368365	385
ENSMUSG00000053205	protein_coding	Styx	ENSMUST00000228321	retained_intron		14	1	45371507	1267
ENSMUSG00000101478	unprocessed_pseudogene	Gm20859	ENSMUST00000187743	unprocessed_pseudogene		Y	-1	77149422	693
ENSMUSG00000095433	lincRNA	Gm21914	ENSMUST00000190577	lincRNA		Y	-1	40457270	174
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000164681	protein_coding		7	1	140882472	726
ENSMUSG00000028857	protein_coding	Tmem222	ENSMUST00000132713	retained_intron		4	-1	133270116	587
ENSMUSG00000095433	lincRNA	Gm21914	ENSMUST00000178452	lincRNA		Y	-1	40457264	498
ENSMUSG00000082994	processed_pseudogene	Gm11848	ENSMUST00000121207	processed_pseudogene		4	-1	17033660	973
ENSMUSG00000028857	protein_coding	Tmem222	ENSMUST00000153059	retained_intron		4	-1	133277751	373
ENSMUSG00000082552	processed_pseudogene	Gm11850	ENSMUST00000119679	processed_pseudogene		4	-1	17046052	479
ENSMUSG00000040128	protein_coding	Pnrc1	ENSMUST00000137589	processed_transcript		4	-1	33290163	665
ENSMUSG00000083572	processed_pseudogene	Gm11849	ENSMUST00000121293	processed_pseudogene		4	-1	17256361	261
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000166889	nonsense_mediated_decay		7	1	140882472	1096
ENSMUSG00000061977	protein_coding	Tas2r104	ENSMUST00000072404	protein_coding	principal1	6	-1	131685744	909
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000130462	protein_coding		7	1	140889400	1215
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000117785	protein_coding		16	-1	74410989	8591
ENSMUSG00000109275	processed_pseudogene	Gm19182	ENSMUST00000207139	processed_pseudogene		7	-1	99740786	577
ENSMUSG00000117732	protein_coding	Gm50364	ENSMUST00000142456	nonsense_mediated_decay	principal1	18	1	76930126	1853
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000125668	retained_intron		7	1	140890389	719
ENSMUSG00000026643	protein_coding	Nmt2	ENSMUST00000081932	protein_coding		2	1	3284212	4461
ENSMUSG00000025487	protein_coding	Psmd13	ENSMUST00000165539	protein_coding		7	1	140894515	288
ENSMUSG00000040128	protein_coding	Pnrc1	ENSMUST00000049357	protein_coding	principal1	4	-1	33248510	1648
ENSMUSG00000083396	processed_pseudogene	Gm15542	ENSMUST00000121585	processed_pseudogene		7	1	140890887	1194
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000231889	protein_coding		16	-1	73961860	5900
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000226478	protein_coding		16	-1	74410912	8059
ENSMUSG00000051153	protein_coding	Tas2r105	ENSMUST00000053652	protein_coding	principal1	6	-1	131687495	964
ENSMUSG00000026643	protein_coding	Nmt2	ENSMUST00000091504	protein_coding		2	1	3284268	1676
ENSMUSG00000040128	protein_coding	Pnrc1	ENSMUST00000155616	processed_transcript		4	-1	33247575	782
ENSMUSG00000082524	processed_pseudogene	Gm6272	ENSMUST00000121256	processed_pseudogene		5	-1	144723797	171
ENSMUSG00000026643	protein_coding	Nmt2	ENSMUST00000102989	protein_coding	principal1	2	1	3284257	2162
ENSMUSG00000008482	protein_coding	Rnf151	ENSMUST00000008626	protein_coding	principal1	17	-1	24718063	1195
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000089362	protein_coding	principal2	16	1	56075468	4825
ENSMUSG00000090000	protein_coding	Ier3ip1	ENSMUST00000026487	protein_coding	principal1	18	1	76930017	1402
ENSMUSG00000038784	protein_coding	Cnot4	ENSMUST00000114989	protein_coding	alternative1	6	-1	35133694	3279
ENSMUSG00000026643	protein_coding	Nmt2	ENSMUST00000155761	processed_transcript		2	1	3284281	2450
ENSMUSG00000100106	lincRNA	Gm28856	ENSMUST00000189150	lincRNA		1	1	130766384	2828
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000201418	retained_intron		16	1	56075475	2407
ENSMUSG00000008482	protein_coding	Rnf151	ENSMUST00000234399	protein_coding		17	-1	24718012	706
ENSMUSG00000101666	processed_pseudogene	Rhoay-ps3	ENSMUST00000187648	processed_pseudogene		Y	1	873640	576
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000202799	protein_coding		16	1	56075475	698
ENSMUSG00000090000	protein_coding	Ier3ip1	ENSMUST00000136800	protein_coding		18	1	76930045	1503
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000201011	protein_coding		16	1	56075480	914
ENSMUSG00000090000	protein_coding	Ier3ip1	ENSMUST00000128679	retained_intron		18	1	76930063	335
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000117200	protein_coding	principal1	16	-1	74411292	5988
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000202000	protein_coding		16	1	56075480	3218
ENSMUSG00000028986	protein_coding	Klhl7	ENSMUST00000030841	protein_coding	principal1	5	1	24100605	2966
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000128495	protein_coding		7	1	6172226	384
ENSMUSG00000090000	protein_coding	Ier3ip1	ENSMUST00000152369	retained_intron		18	1	76939284	563
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000149114	retained_intron		16	-1	73899885	4046
ENSMUSG00000107480	TEC	Gm44165	ENSMUST00000203093	TEC		7	-1	3491079	1469
ENSMUSG00000038784	protein_coding	Cnot4	ENSMUST00000114993	protein_coding	alternative1	6	-1	35133689	3473
ENSMUSG00000028986	protein_coding	Klhl7	ENSMUST00000200116	nonsense_mediated_decay		5	1	24100606	3086
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000137420	protein_coding		16	-1	73906999	535
ENSMUSG00000032671	protein_coding	A930018P22Rik	ENSMUST00000040374	protein_coding	principal1	2	1	104122769	822
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000231426	protein_coding		16	-1	73916174	657
ENSMUSG00000029916	protein_coding	Agk	ENSMUST00000031977	protein_coding	principal1	6	1	40325172	2531
ENSMUSG00000028986	protein_coding	Klhl7	ENSMUST00000163409	protein_coding		5	1	24100623	2857
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000138852	protein_coding		16	-1	73933076	774
ENSMUSG00000024604	protein_coding	Rbm22	ENSMUST00000025506	protein_coding	principal1	18	1	60560736	2210
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000110064	protein_coding	principal2	2	1	140395356	4883
ENSMUSG00000024604	protein_coding	Rbm22	ENSMUST00000160020	retained_intron		18	1	60560764	352
ENSMUSG00000028986	protein_coding	Klhl7	ENSMUST00000199530	retained_intron		5	1	24100648	1589
ENSMUSG00000038784	protein_coding	Cnot4	ENSMUST00000044163	protein_coding	principal3	6	-1	35133715	3337
ENSMUSG00000099436	lincRNA	Gm28977	ENSMUST00000188678	lincRNA		Y	-1	88664536	2168
ENSMUSG00000028341	protein_coding	Nr4a3	ENSMUST00000030025	protein_coding	principal1	4	1	48045153	5720
ENSMUSG00000029916	protein_coding	Agk	ENSMUST00000201342	retained_intron		6	1	40325485	785
ENSMUSG00000098290	unprocessed_pseudogene	Obox4-ps1	ENSMUST00000184446	unprocessed_pseudogene		7	-1	14518670	700
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000046689	protein_coding	principal2	6	1	149309428	6066
ENSMUSG00000024604	protein_coding	Rbm22	ENSMUST00000161544	retained_intron		18	1	60560768	3541
ENSMUSG00000029916	protein_coding	Agk	ENSMUST00000201329	retained_intron		6	1	40325487	1281
ENSMUSG00000038784	protein_coding	Cnot4	ENSMUST00000202417	protein_coding	alternative1	6	-1	35133724	3296
ENSMUSG00000029916	protein_coding	Agk	ENSMUST00000202949	retained_intron		6	1	40325508	2175
ENSMUSG00000090101	antisense	Snhg9	ENSMUST00000161706	antisense		17	-1	24719965	183
ENSMUSG00000038784	protein_coding	Cnot4	ENSMUST00000200743	retained_intron		6	-1	35056409	3941
ENSMUSG00000028341	protein_coding	Nr4a3	ENSMUST00000154186	processed_transcript		4	1	48045231	895
ENSMUSG00000018830	protein_coding	Myh11	ENSMUST00000090287	protein_coding	alternative1	16	-1	14291372	6549
ENSMUSG00000029916	protein_coding	Agk	ENSMUST00000201033	processed_transcript		6	1	40329492	672
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000200714	retained_intron		16	1	56180009	1330
ENSMUSG00000024604	protein_coding	Rbm22	ENSMUST00000159203	retained_intron		18	1	60570416	595
ENSMUSG00000100067	lincRNA	Gm28407	ENSMUST00000185630	lincRNA		Y	1	88696465	1497
ENSMUSG00000018830	protein_coding	Myh11	ENSMUST00000231567	protein_coding	principal5	16	-1	14291365	6450
ENSMUSG00000038784	protein_coding	Cnot4	ENSMUST00000202666	processed_transcript		6	-1	35133687	561
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000202108	retained_intron		16	1	56180483	421
ENSMUSG00000028341	protein_coding	Nr4a3	ENSMUST00000153369	protein_coding		4	1	48049114	5068
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000138786	processed_transcript		2	1	141555676	4152
ENSMUSG00000029916	protein_coding	Agk	ENSMUST00000200715	nonsense_mediated_decay		6	1	40329492	3174
ENSMUSG00000024604	protein_coding	Rbm22	ENSMUST00000160353	retained_intron		18	1	60570599	573
ENSMUSG00000100067	lincRNA	Gm28407	ENSMUST00000187247	lincRNA		Y	1	88696917	437
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000202272	retained_intron		16	1	56182468	3602
ENSMUSG00000029916	protein_coding	Agk	ENSMUST00000202856	retained_intron		6	1	40350001	3002
ENSMUSG00000098741	unprocessed_pseudogene	Obox4-ps2	ENSMUST00000185088	unprocessed_pseudogene		7	-1	14530066	442
ENSMUSG00000053338	protein_coding	Tarm1	ENSMUST00000203020	protein_coding	alternative2	7	-1	3502558	1487
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000116586	protein_coding		16	-1	73933789	886
ENSMUSG00000109424	lincRNA	Gm44658	ENSMUST00000207965	lincRNA		7	1	19846973	637
ENSMUSG00000028341	protein_coding	Nr4a3	ENSMUST00000133539	processed_transcript		4	1	48051248	1290
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000201391	processed_transcript		16	1	56183645	389
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000227347	protein_coding		16	-1	74411534	3818
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000190785	protein_coding		6	1	149309456	4152
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000147408	processed_transcript		16	-1	74027889	430
ENSMUSG00000053338	protein_coding	Tarm1	ENSMUST00000203821	protein_coding	principal2	7	-1	3502624	1535
ENSMUSG00000043605	protein_coding	Olfr13	ENSMUST00000216179	protein_coding	principal1	6	1	43172140	3677
ENSMUSG00000029916	protein_coding	Agk	ENSMUST00000201751	retained_intron		6	1	40376041	836
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000202159	processed_transcript		16	1	56186129	667
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000140062	retained_intron		16	-1	74411437	2942
ENSMUSG00000018830	protein_coding	Myh11	ENSMUST00000230397	protein_coding		16	-1	14291363	6214
ENSMUSG00000053338	protein_coding	Tarm1	ENSMUST00000065703	protein_coding	alternative2	7	-1	3502518	892
ENSMUSG00000043605	protein_coding	Olfr13	ENSMUST00000059512	protein_coding	principal1	6	1	43173952	1054
ENSMUSG00000024505	protein_coding	Dtwd2	ENSMUST00000163590	protein_coding	principal1	18	-1	49755601	3145
ENSMUSG00000110286	lincRNA	Gm7706	ENSMUST00000211278	lincRNA		8	1	15141044	590
ENSMUSG00000052516	protein_coding	Robo2	ENSMUST00000156010	retained_intron		16	-1	74411825	4057
ENSMUSG00000110286	lincRNA	Gm7706	ENSMUST00000209946	lincRNA		8	1	15141194	388
ENSMUSG00000052917	protein_coding	Senp7	ENSMUST00000089360	protein_coding	alternative2	16	1	56075409	4802
ENSMUSG00000043388	protein_coding	Tmem130	ENSMUST00000061446	protein_coding	principal1	5	-1	144761649	2805
ENSMUSG00000109886	lincRNA	Gm45271	ENSMUST00000211017	lincRNA		8	-1	15189612	919
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000189932	protein_coding	principal2	6	1	149309474	5269
ENSMUSG00000116826	processed_pseudogene	Gm49682	ENSMUST00000231653	processed_pseudogene		16	-1	56149562	397
ENSMUSG00000018830	protein_coding	Myh11	ENSMUST00000230643	retained_intron		16	-1	14291366	1730
ENSMUSG00000116999	processed_pseudogene	Gm18723	ENSMUST00000232486	processed_pseudogene		16	-1	56096839	1126
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000100765	protein_coding	principal2	6	1	149309474	5356
ENSMUSG00000067555	unprocessed_pseudogene	Gm10212	ENSMUST00000087884	unprocessed_pseudogene		19	1	11569449	324
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000138485	retained_intron		2	1	140395433	1335
ENSMUSG00000043388	protein_coding	Tmem130	ENSMUST00000197254	processed_transcript		5	-1	144761818	564
ENSMUSG00000113229	processed_pseudogene	Gm18442	ENSMUST00000220925	processed_pseudogene		12	1	38875404	639
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000137983	retained_intron		6	1	149309573	466
ENSMUSG00000049950	protein_coding	Rpp38	ENSMUST00000062672	protein_coding	principal1	2	-1	3332643	1042
ENSMUSG00000024505	protein_coding	Dtwd2	ENSMUST00000139852	processed_transcript		18	-1	49734106	1911
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000185930	protein_coding		6	1	149309728	511
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000108567	protein_coding	principal1	7	1	6172482	5104
ENSMUSG00000098244	processed_pseudogene	Gm26928	ENSMUST00000182674	processed_pseudogene		18	-1	45090314	572
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000203348	retained_intron		6	1	149311416	2951
ENSMUSG00000118188	processed_pseudogene	Gm50123	ENSMUST00000236528	processed_pseudogene		18	1	45063956	244
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000207176	protein_coding		7	1	6172501	379
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000127680	protein_coding		6	1	149317334	938
ENSMUSG00000118013	lincRNA	Gm31706	ENSMUST00000238022	lincRNA		18	1	45044862	3529
ENSMUSG00000044544	lincRNA	4921513I03Rik	ENSMUST00000219219	lincRNA		10	1	120765732	491
ENSMUSG00000117929	processed_pseudogene	Gm6663	ENSMUST00000237335	processed_pseudogene		18	-1	45071294	973
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000187881	protein_coding		6	1	149324656	514
ENSMUSG00000044544	lincRNA	4921513I03Rik	ENSMUST00000056994	lincRNA		10	1	120765774	1534
ENSMUSG00000118635	unprocessed_pseudogene	AC240460.1	ENSMUST00000239381	unprocessed_pseudogene		7	-1	3515365	531
ENSMUSG00000042485	protein_coding	Mustn1	ENSMUST00000040715	protein_coding	principal1	14	1	30879200	1236
ENSMUSG00000028464	protein_coding	Tpm2	ENSMUST00000150262	processed_transcript		4	-1	43523438	1545
ENSMUSG00000032712	protein_coding	Resf1	ENSMUST00000189837	protein_coding	alternative2	6	1	149325458	5469
ENSMUSG00000024505	protein_coding	Dtwd2	ENSMUST00000025383	protein_coding		18	-1	49755567	1389
ENSMUSG00000111907	lincRNA	Gm48202	ENSMUST00000219156	lincRNA		10	-1	120766028	387
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000110062	protein_coding		2	1	140395430	3554
ENSMUSG00000024505	protein_coding	Dtwd2	ENSMUST00000237137	nonsense_mediated_decay		18	-1	49755567	1484
ENSMUSG00000113979	processed_pseudogene	Gm47012	ENSMUST00000222924	processed_pseudogene		12	1	42017880	401
ENSMUSG00000113420	processed_pseudogene	Gm7242	ENSMUST00000221134	processed_pseudogene		12	1	42028212	705
ENSMUSG00000044533	protein_coding	Rps2	ENSMUST00000152407	protein_coding		17	1	24718116	1034
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000150460	processed_transcript		2	1	140395442	762
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000154505	processed_transcript		2	1	140395456	852
ENSMUSG00000095189	protein_coding	Olfr1472	ENSMUST00000096201	protein_coding	principal1	19	-1	13456086	1377
ENSMUSG00000095189	protein_coding	Olfr1472	ENSMUST00000077501	protein_coding	principal1	19	-1	13454515	945
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000124403	processed_transcript		2	1	140395460	1049
ENSMUSG00000113989	lincRNA	Gm47013	ENSMUST00000222694	lincRNA		12	1	42088439	473
ENSMUSG00000112898	lincRNA	Gm47020	ENSMUST00000219118	lincRNA		12	-1	42151840	318
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000110061	protein_coding		2	1	140395595	887
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000110067	protein_coding	alternative2	2	1	140395309	4730
ENSMUSG00000061619	processed_pseudogene	Vma21-ps	ENSMUST00000114578	processed_pseudogene		4	-1	52497244	306
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000110063	protein_coding		2	1	140395356	845
ENSMUSG00000044533	protein_coding	Rps2	ENSMUST00000054289	protein_coding	principal1	17	1	24720110	1094
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000139039	processed_transcript		2	1	141024062	364
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000156619	protein_coding		2	1	142176607	304
ENSMUSG00000087020	processed_transcript	Gm16283	ENSMUST00000149935	processed_transcript		18	1	49755794	522
ENSMUSG00000112407	lincRNA	Gm33340	ENSMUST00000220044	lincRNA		12	-1	43015459	284
ENSMUSG00000044533	protein_coding	Rps2	ENSMUST00000146867	protein_coding		17	1	24720251	962
ENSMUSG00000045215	protein_coding	Asxl3	ENSMUST00000239326	protein_coding	alternative2	18	1	22344246	11353
ENSMUSG00000112407	lincRNA	Gm33340	ENSMUST00000219846	lincRNA		12	-1	43034182	578
ENSMUSG00000112407	lincRNA	Gm33340	ENSMUST00000219475	lincRNA		12	-1	43034217	375
ENSMUSG00000045215	protein_coding	Asxl3	ENSMUST00000153836	retained_intron		18	1	22344883	3916
ENSMUSG00000021758	protein_coding	Ddx4	ENSMUST00000075748	protein_coding	principal3	13	-1	112652301	2762
ENSMUSG00000044533	protein_coding	Rps2	ENSMUST00000129984	retained_intron		17	1	24720262	965
ENSMUSG00000109573	unprocessed_pseudogene	Olfr1473-ps1	ENSMUST00000207135	unprocessed_pseudogene		19	-1	13463635	958
ENSMUSG00000044533	protein_coding	Rps2	ENSMUST00000122809	retained_intron		17	1	24720273	823
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000043836	protein_coding		2	1	140395435	3552
ENSMUSG00000044533	protein_coding	Rps2	ENSMUST00000129580	retained_intron		17	1	24720823	637
ENSMUSG00000045215	protein_coding	Asxl3	ENSMUST00000120223	protein_coding	principal2	18	1	22345089	11485
ENSMUSG00000068205	protein_coding	Macrod2	ENSMUST00000078027	protein_coding	principal2	2	1	140395435	1669
ENSMUSG00000057229	protein_coding	Dmac2	ENSMUST00000077338	protein_coding	alternative2	7	1	25619414	1465
ENSMUSG00000044533	protein_coding	Rps2	ENSMUST00000132803	retained_intron		17	1	24721449	389
ENSMUSG00000100134	lincRNA	1700065O20Rik	ENSMUST00000186872	lincRNA		18	-1	49817958	710
ENSMUSG00000057229	protein_coding	Dmac2	ENSMUST00000205593	retained_intron		7	1	25619424	1116
ENSMUSG00000045215	protein_coding	Asxl3	ENSMUST00000097655	protein_coding	principal2	18	1	22345089	11697
ENSMUSG00000044533	protein_coding	Rps2	ENSMUST00000170715	protein_coding	principal1	17	1	24720063	998
ENSMUSG00000028909	protein_coding	Ptpru	ENSMUST00000105987	protein_coding	principal3	4	-1	131838288	5484
ENSMUSG00000057229	protein_coding	Dmac2	ENSMUST00000085953	protein_coding	principal3	7	1	25619493	2387
ENSMUSG00000100818	unprocessed_pseudogene	Gm21287	ENSMUST00000191377	unprocessed_pseudogene		Y	-1	88805453	696
ENSMUSG00000021687	protein_coding	Scamp1	ENSMUST00000022197	protein_coding	principal1	13	-1	94285829	4259
ENSMUSG00000028314	protein_coding	Toporsl	ENSMUST00000029995	protein_coding	principal1	4	1	52596274	2668
ENSMUSG00000028909	protein_coding	Ptpru	ENSMUST00000144136	processed_transcript		4	-1	131768921	389
ENSMUSG00000021758	protein_coding	Ddx4	ENSMUST00000099166	protein_coding	alternative2	13	-1	112652475	3012
ENSMUSG00000057229	protein_coding	Dmac2	ENSMUST00000130897	retained_intron		7	1	25620537	619
ENSMUSG00000057229	protein_coding	Dmac2	ENSMUST00000126925	nonsense_mediated_decay		7	1	25620896	563
ENSMUSG00000028314	protein_coding	Toporsl	ENSMUST00000107671	protein_coding	principal1	4	1	52607206	2699
ENSMUSG00000057229	protein_coding	Dmac2	ENSMUST00000147472	processed_transcript		7	1	25620903	310
ENSMUSG00000033276	protein_coding	Stk36	ENSMUST00000087183	protein_coding	principal1	1	1	74601445	5245
ENSMUSG00000051379	protein_coding	Flrt3	ENSMUST00000172544	processed_transcript		2	-1	140671450	739
ENSMUSG00000113933	lincRNA	Gm34611	ENSMUST00000223252	lincRNA		12	-1	38906953	627
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000054680	protein_coding	principal1	7	1	6172502	2467
ENSMUSG00000028233	protein_coding	Tgs1	ENSMUST00000052712	protein_coding	principal1	4	1	3574875	4327
ENSMUSG00000028909	protein_coding	Ptpru	ENSMUST00000030741	protein_coding	alternative1	4	-1	131838231	4416
ENSMUSG00000096273	protein_coding	Olfr1474	ENSMUST00000220113	protein_coding	principal1	19	1	13469565	1539
ENSMUSG00000097890	bidirectional_promoter_lncRNA	4930547M16Rik	ENSMUST00000181590	bidirectional_promoter_lncRNA		10	1	39899329	2400
ENSMUSG00000051379	protein_coding	Flrt3	ENSMUST00000110057	protein_coding	principal1	2	-1	140671469	3977
ENSMUSG00000003438	protein_coding	Timm50	ENSMUST00000081946	protein_coding	principal1	7	-1	28312072	1515
ENSMUSG00000028233	protein_coding	Tgs1	ENSMUST00000132518	retained_intron		4	1	3574950	687
ENSMUSG00000096273	protein_coding	Olfr1474	ENSMUST00000207529	protein_coding		19	1	13470103	474
ENSMUSG00000097890	bidirectional_promoter_lncRNA	4930547M16Rik	ENSMUST00000213497	bidirectional_promoter_lncRNA		10	1	39899359	649
ENSMUSG00000084828	processed_transcript	Gm12367	ENSMUST00000127015	processed_transcript		4	1	35225897	423
ENSMUSG00000084828	processed_transcript	Gm12367	ENSMUST00000149677	processed_transcript		4	1	35225915	658
ENSMUSG00000107469	unprocessed_pseudogene	Olfr436-ps1	ENSMUST00000203108	unprocessed_pseudogene		6	1	43187171	284
ENSMUSG00000096273	protein_coding	Olfr1474	ENSMUST00000096202	protein_coding	principal1	19	1	13470972	945
ENSMUSG00000028233	protein_coding	Tgs1	ENSMUST00000129964	processed_transcript		4	1	3593586	544
ENSMUSG00000003438	protein_coding	Timm50	ENSMUST00000151990	retained_intron		7	-1	28306664	449
ENSMUSG00000034761	protein_coding	Map4k5	ENSMUST00000110567	protein_coding		12	-1	69893009	4250
ENSMUSG00000028233	protein_coding	Tgs1	ENSMUST00000130514	retained_intron		4	1	3598554	515
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000108566	protein_coding	principal1	7	1	6172513	1648
ENSMUSG00000112904	lincRNA	Gm47030	ENSMUST00000217732	lincRNA		12	1	43306143	439
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000113326	protein_coding	principal2	6	-1	99266515	7029
ENSMUSG00000104088	TEC	Gm38275	ENSMUST00000193293	TEC		19	-1	11584357	1532
ENSMUSG00000028233	protein_coding	Tgs1	ENSMUST00000146315	retained_intron		4	1	3605637	690
ENSMUSG00000112844	processed_pseudogene	Gm47036	ENSMUST00000217755	processed_pseudogene		12	1	43750774	3841
ENSMUSG00000084828	processed_transcript	Gm12367	ENSMUST00000146909	processed_transcript		4	1	35225932	2105
ENSMUSG00000111355	processed_pseudogene	Gm8911	ENSMUST00000213986	processed_pseudogene		10	1	39911149	652
ENSMUSG00000051379	protein_coding	Flrt3	ENSMUST00000056760	protein_coding	principal1	2	-1	140671400	3334
ENSMUSG00000003438	protein_coding	Timm50	ENSMUST00000134263	retained_intron		7	-1	28308018	632
ENSMUSG00000082762	processed_pseudogene	Gm12366	ENSMUST00000121722	processed_pseudogene		4	-1	35202975	873
ENSMUSG00000108758	processed_pseudogene	Gm44921	ENSMUST00000205290	processed_pseudogene		7	-1	3568031	301
ENSMUSG00000021687	protein_coding	Scamp1	ENSMUST00000152555	protein_coding		13	-1	94285857	1877
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000149540	processed_transcript		7	1	6172564	701
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000177410	processed_transcript		6	-1	98929785	618
ENSMUSG00000096708	protein_coding	Olfr1475	ENSMUST00000080801	protein_coding	principal1	19	-1	13480196	945
ENSMUSG00000108644	lincRNA	Gm44920	ENSMUST00000206503	lincRNA		7	-1	3604150	746
ENSMUSG00000021687	protein_coding	Scamp1	ENSMUST00000153558	protein_coding		13	-1	94246558	1255
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000207329	protein_coding		7	1	6172572	358
ENSMUSG00000048693	protein_coding	Olfr435	ENSMUST00000215565	protein_coding	principal1	6	1	43197146	2491
ENSMUSG00000024665	protein_coding	Fads2	ENSMUST00000025567	protein_coding	principal1	19	-1	10101746	3150
ENSMUSG00000050890	protein_coding	Pdik1l	ENSMUST00000105877	protein_coding		4	-1	134287239	4674
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000137450	processed_transcript		7	1	6173807	329
ENSMUSG00000026415	protein_coding	Fcamr	ENSMUST00000112477	protein_coding	alternative2	1	1	130800902	1879
ENSMUSG00000118213	processed_pseudogene	Gm50307	ENSMUST00000237542	processed_pseudogene		19	-1	3317581	800
ENSMUSG00000074763	antisense	Macrod2os2	ENSMUST00000143227	antisense		2	-1	141235426	3566
ENSMUSG00000021687	protein_coding	Scamp1	ENSMUST00000138255	protein_coding		13	-1	94265146	621
ENSMUSG00000074763	antisense	Macrod2os2	ENSMUST00000178769	antisense		2	-1	141232370	387
ENSMUSG00000048693	protein_coding	Olfr435	ENSMUST00000058118	protein_coding	principal1	6	1	43201646	942
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000208192	processed_transcript		7	1	6173974	729
ENSMUSG00000069041	protein_coding	Slc25a31	ENSMUST00000091184	protein_coding	principal1	3	1	40708855	2128
ENSMUSG00000081731	processed_pseudogene	Calr-ps	ENSMUST00000121776	processed_pseudogene		2	-1	140956249	485
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000108565	protein_coding		7	1	6174035	849
ENSMUSG00000082412	processed_pseudogene	Fau-ps1	ENSMUST00000119675	processed_pseudogene		2	1	141838789	252
ENSMUSG00000003438	protein_coding	Timm50	ENSMUST00000131849	retained_intron		7	-1	28312037	891
ENSMUSG00000113108	processed_pseudogene	Gm47832	ENSMUST00000222408	processed_pseudogene		12	-1	38937049	402
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000134933	protein_coding		7	1	6181456	411
ENSMUSG00000003438	protein_coding	Timm50	ENSMUST00000135220	retained_intron		7	-1	28312056	394
ENSMUSG00000044876	protein_coding	Zfp444	ENSMUST00000136777	protein_coding		7	1	6183576	560
ENSMUSG00000003438	protein_coding	Timm50	ENSMUST00000136427	processed_transcript		7	-1	28311939	334
ENSMUSG00000026415	protein_coding	Fcamr	ENSMUST00000027670	protein_coding	principal3	1	1	130800902	1743
ENSMUSG00000111377	lincRNA	Gm40634	ENSMUST00000214129	lincRNA		10	-1	43743087	2001
ENSMUSG00000046623	protein_coding	Gjb4	ENSMUST00000106090	protein_coding	principal1	4	-1	127354081	1446
ENSMUSG00000109165	sense_intronic	Gm45148	ENSMUST00000208578	sense_intronic		7	1	6179975	513
ENSMUSG00000060407	protein_coding	Cyp2a12	ENSMUST00000207016	retained_intron		7	1	27029081	3457
ENSMUSG00000096158	processed_pseudogene	Gm21827	ENSMUST00000178247	processed_pseudogene		6	1	43210333	423
ENSMUSG00000085478	lincRNA	Gm11851	ENSMUST00000132219	lincRNA		4	-1	17657963	692
ENSMUSG00000113092	lincRNA	Gm34662	ENSMUST00000220753	lincRNA		12	-1	38984018	603
ENSMUSG00000028909	protein_coding	Ptpru	ENSMUST00000127633	processed_transcript		4	-1	131838252	4292
ENSMUSG00000046623	protein_coding	Gjb4	ENSMUST00000060419	protein_coding	principal1	4	-1	127354081	1445
ENSMUSG00000113092	lincRNA	Gm34662	ENSMUST00000220502	lincRNA		12	-1	38984000	215
ENSMUSG00000024665	protein_coding	Fads2	ENSMUST00000238023	processed_transcript		19	-1	10071187	879
ENSMUSG00000113266	processed_pseudogene	Gm19563	ENSMUST00000222031	processed_pseudogene		12	1	38998654	270
ENSMUSG00000024665	protein_coding	Fads2	ENSMUST00000235937	protein_coding		19	-1	10088716	355
ENSMUSG00000111422	lincRNA	1700027J07Rik	ENSMUST00000213330	lincRNA		10	1	43745809	1136
ENSMUSG00000111422	lincRNA	1700027J07Rik	ENSMUST00000217501	lincRNA		10	1	43745856	1884
ENSMUSG00000028909	protein_coding	Ptpru	ENSMUST00000097860	protein_coding		4	-1	131821516	3365
ENSMUSG00000118034	processed_pseudogene	Gm4839	ENSMUST00000235151	processed_pseudogene		18	-1	45147126	623
ENSMUSG00000113272	lincRNA	Gm34809	ENSMUST00000222945	lincRNA		12	-1	39154761	509
ENSMUSG00000113272	lincRNA	Gm34809	ENSMUST00000221271	lincRNA		12	-1	39154719	467
ENSMUSG00000113272	lincRNA	Gm34809	ENSMUST00000220510	lincRNA		12	-1	39154719	1135
ENSMUSG00000100508	lincRNA	Gm28617	ENSMUST00000187191	lincRNA		Y	-1	40496767	352
ENSMUSG00000100508	lincRNA	Gm28617	ENSMUST00000190129	lincRNA		Y	-1	40496767	537
ENSMUSG00000111422	lincRNA	1700027J07Rik	ENSMUST00000215747	lincRNA		10	1	43746158	1060
ENSMUSG00000086706	antisense	Gm15848	ENSMUST00000125056	antisense		1	-1	130824084	832
ENSMUSG00000028909	protein_coding	Ptpru	ENSMUST00000123878	processed_transcript		4	-1	131802996	714
ENSMUSG00000112549	lincRNA	Gm35818	ENSMUST00000219480	lincRNA		12	-1	54106885	1568
ENSMUSG00000086706	antisense	Gm15848	ENSMUST00000122968	antisense		1	-1	130820674	426
ENSMUSG00000059411	protein_coding	Olfr434	ENSMUST00000215485	processed_transcript		6	1	43213021	1096
ENSMUSG00000028909	protein_coding	Ptpru	ENSMUST00000154224	retained_intron		4	-1	131798370	625
ENSMUSG00000086706	antisense	Gm15848	ENSMUST00000136015	antisense		1	-1	130820704	482
ENSMUSG00000100771	processed_pseudogene	Gm28618	ENSMUST00000189283	processed_pseudogene		Y	1	40566172	567
ENSMUSG00000028909	protein_coding	Ptpru	ENSMUST00000139641	retained_intron		4	-1	131803620	599
ENSMUSG00000059411	protein_coding	Olfr434	ENSMUST00000216562	protein_coding	principal1	6	1	43213021	1318
ENSMUSG00000090322	antisense	Gm17090	ENSMUST00000171768	antisense		1	-1	91321101	490
ENSMUSG00000094852	processed_pseudogene	Gm9034	ENSMUST00000182071	processed_pseudogene		10	1	43821231	1005
ENSMUSG00000026644	protein_coding	Acbd7	ENSMUST00000115089	protein_coding	principal2	2	1	3336168	531
ENSMUSG00000111342	lincRNA	4933404K13Rik	ENSMUST00000216740	lincRNA		10	1	43824200	784
ENSMUSG00000111342	lincRNA	4933404K13Rik	ENSMUST00000214651	lincRNA		10	1	43825892	937
ENSMUSG00000026644	protein_coding	Acbd7	ENSMUST00000228935	protein_coding	alternative1	2	1	3336168	534
ENSMUSG00000059411	protein_coding	Olfr434	ENSMUST00000076752	protein_coding	principal1	6	1	43216883	1056
ENSMUSG00000101090	lincRNA	Gm28619	ENSMUST00000185889	lincRNA		Y	-1	40641058	622
ENSMUSG00000111342	lincRNA	4933404K13Rik	ENSMUST00000217125	lincRNA		10	1	43826580	1060
ENSMUSG00000101090	lincRNA	Gm28619	ENSMUST00000189278	lincRNA		Y	-1	40641058	437
ENSMUSG00000060407	protein_coding	Cyp2a12	ENSMUST00000075552	protein_coding	principal1	7	1	27029090	1681
ENSMUSG00000085394	lincRNA	2210414B05Rik	ENSMUST00000139600	lincRNA		4	1	3656508	872
ENSMUSG00000100644	unprocessed_pseudogene	Gm20793	ENSMUST00000190779	unprocessed_pseudogene		Y	1	40682046	696
ENSMUSG00000097429	lincRNA	Gm26520	ENSMUST00000180719	lincRNA		12	-1	3357153	1423
ENSMUSG00000014554	protein_coding	Dguok	ENSMUST00000014698	protein_coding	principal1	6	-1	83506969	1107
ENSMUSG00000112258	lincRNA	Gm10165	ENSMUST00000217666	lincRNA		12	-1	43844193	2380
ENSMUSG00000040127	protein_coding	Sdr9c7	ENSMUST00000047134	protein_coding	principal1	10	1	127898518	2868
ENSMUSG00000107824	processed_pseudogene	Gm6443	ENSMUST00000203599	processed_pseudogene		6	-1	47977876	874
ENSMUSG00000034761	protein_coding	Map4k5	ENSMUST00000153712	processed_transcript		12	-1	69893103	4343
ENSMUSG00000033276	protein_coding	Stk36	ENSMUST00000145673	retained_intron		1	1	74601480	5489
ENSMUSG00000059479	protein_coding	B3gnt8	ENSMUST00000205281	protein_coding		7	1	25626654	723
ENSMUSG00000014554	protein_coding	Dguok	ENSMUST00000113888	protein_coding		6	-1	83506969	1007
ENSMUSG00000109189	unprocessed_pseudogene	Olfr1476-ps1	ENSMUST00000208572	unprocessed_pseudogene		19	1	13488351	367
ENSMUSG00000059479	protein_coding	B3gnt8	ENSMUST00000206940	nonsense_mediated_decay		7	1	25627637	5756
ENSMUSG00000037017	protein_coding	Zscan21	ENSMUST00000062350	protein_coding	principal1	5	1	138116903	2252
ENSMUSG00000081975	processed_pseudogene	Gm12482	ENSMUST00000120435	processed_pseudogene		4	1	52821488	630
ENSMUSG00000030660	protein_coding	Pik3c2a	ENSMUST00000170430	protein_coding	principal1	7	-1	116443449	8044
ENSMUSG00000040127	protein_coding	Sdr9c7	ENSMUST00000151614	processed_transcript		10	1	127898775	2575
ENSMUSG00000033276	protein_coding	Stk36	ENSMUST00000148456	protein_coding		1	1	74601503	3345
ENSMUSG00000027742	protein_coding	Cog6	ENSMUST00000036665	protein_coding	principal1	3	-1	53017237	3182
ENSMUSG00000049173	protein_coding	Myoz3	ENSMUST00000056533	protein_coding	principal1	18	-1	60591788	3436
ENSMUSG00000014554	protein_coding	Dguok	ENSMUST00000145455	nonsense_mediated_decay		6	-1	83506843	1737
ENSMUSG00000059479	protein_coding	B3gnt8	ENSMUST00000076034	protein_coding	principal1	7	1	25627638	1463
ENSMUSG00000050890	protein_coding	Pdik1l	ENSMUST00000061234	protein_coding	principal1	4	-1	134287895	4686
ENSMUSG00000040127	protein_coding	Sdr9c7	ENSMUST00000155067	processed_transcript		10	1	127902046	1175
ENSMUSG00000037722	protein_coding	Gnpnat1	ENSMUST00000046191	protein_coding	principal1	14	-1	45388961	2788
ENSMUSG00000014554	protein_coding	Dguok	ENSMUST00000138941	nonsense_mediated_decay		6	-1	83506821	828
ENSMUSG00000089717	protein_coding	Olfr275	ENSMUST00000135738	processed_transcript		4	1	52814604	1188
ENSMUSG00000089717	protein_coding	Olfr275	ENSMUST00000219705	processed_transcript		4	1	52824707	2337
ENSMUSG00000059479	protein_coding	B3gnt8	ENSMUST00000206824	retained_intron		7	1	25627642	1844
ENSMUSG00000027870	protein_coding	Hao2	ENSMUST00000029464	protein_coding	principal1	3	-1	98893239	2049
ENSMUSG00000025421	protein_coding	Hdhd2	ENSMUST00000097522	protein_coding	principal1	18	1	76944092	5477
ENSMUSG00000030660	protein_coding	Pik3c2a	ENSMUST00000206805	retained_intron		7	-1	116340629	3354
ENSMUSG00000040127	protein_coding	Sdr9c7	ENSMUST00000149849	processed_transcript		10	1	127903414	817
ENSMUSG00000033276	protein_coding	Stk36	ENSMUST00000113694	protein_coding		1	1	74601514	629
ENSMUSG00000037722	protein_coding	Gnpnat1	ENSMUST00000227468	protein_coding	principal1	14	-1	45385484	1490
ENSMUSG00000014554	protein_coding	Dguok	ENSMUST00000206397	processed_transcript		6	-1	83493677	721
ENSMUSG00000089717	protein_coding	Olfr275	ENSMUST00000095085	protein_coding	principal1	4	1	52825399	960
ENSMUSG00000014554	protein_coding	Dguok	ENSMUST00000153415	processed_transcript		6	-1	83487010	277
ENSMUSG00000037149	protein_coding	Ddx1	ENSMUST00000071103	protein_coding	principal1	12	-1	13249213	4842
ENSMUSG00000027742	protein_coding	Cog6	ENSMUST00000194779	retained_intron		3	-1	52994685	2726
ENSMUSG00000021738	protein_coding	Atxn7	ENSMUST00000223880	protein_coding	principal2	14	1	13961440	2946
ENSMUSG00000034761	protein_coding	Map4k5	ENSMUST00000110570	protein_coding	principal5	12	-1	69893200	4498
ENSMUSG00000033276	protein_coding	Stk36	ENSMUST00000087186	protein_coding		1	1	74601639	4065
ENSMUSG00000026083	protein_coding	Eif5b	ENSMUST00000027252	protein_coding	principal1	1	1	37998010	7797
ENSMUSG00000014554	protein_coding	Dguok	ENSMUST00000206974	retained_intron		6	-1	83490420	2442
ENSMUSG00000021738	protein_coding	Atxn7	ENSMUST00000223714	protein_coding	alternative2	14	1	13995007	2954
ENSMUSG00000027742	protein_coding	Cog6	ENSMUST00000193432	protein_coding		3	-1	53017216	2078
ENSMUSG00000037017	protein_coding	Zscan21	ENSMUST00000110961	protein_coding	principal1	5	1	138116916	2310
ENSMUSG00000030660	protein_coding	Pik3c2a	ENSMUST00000206385	nonsense_mediated_decay		7	-1	116368190	2830
ENSMUSG00000111960	lincRNA	Gm46349	ENSMUST00000219678	lincRNA		12	-1	43961097	917
ENSMUSG00000033276	protein_coding	Stk36	ENSMUST00000189830	nonsense_mediated_decay		1	1	74603210	659
ENSMUSG00000014554	protein_coding	Dguok	ENSMUST00000147060	retained_intron		6	-1	83506907	561
ENSMUSG00000037722	protein_coding	Gnpnat1	ENSMUST00000228451	protein_coding		14	-1	45383443	581
ENSMUSG00000028464	protein_coding	Tpm2	ENSMUST00000030184	protein_coding	alternative1	4	-1	43523464	2175
ENSMUSG00000034761	protein_coding	Map4k5	ENSMUST00000126584	retained_intron		12	-1	69818453	4249
ENSMUSG00000108637	processed_pseudogene	Gm4290	ENSMUST00000206897	processed_pseudogene		7	1	27046894	814
ENSMUSG00000027742	protein_coding	Cog6	ENSMUST00000195183	protein_coding		3	-1	53017218	543
ENSMUSG00000030660	protein_coding	Pik3c2a	ENSMUST00000206219	protein_coding	principal1	7	-1	116443449	5670
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000099691	protein_coding	alternative2	10	-1	62340542	4278
ENSMUSG00000034761	protein_coding	Map4k5	ENSMUST00000153550	processed_transcript		12	-1	69818857	463
ENSMUSG00000060376	protein_coding	Bckdha	ENSMUST00000205808	protein_coding		7	-1	25631743	751
ENSMUSG00000015659	protein_coding	Serac1	ENSMUST00000097432	protein_coding	alternative2	17	-1	6079741	4007
ENSMUSG00000112038	processed_pseudogene	Gm47056	ENSMUST00000219963	processed_pseudogene		12	1	44121756	3845
ENSMUSG00000037017	protein_coding	Zscan21	ENSMUST00000080732	protein_coding	principal1	5	1	138116937	2134
ENSMUSG00000033276	protein_coding	Stk36	ENSMUST00000157007	retained_intron		1	1	74622353	646
ENSMUSG00000078125	processed_pseudogene	Gm10916	ENSMUST00000080330	processed_pseudogene		14	1	50769248	483
ENSMUSG00000030660	protein_coding	Pik3c2a	ENSMUST00000206248	retained_intron		7	-1	116342646	741
ENSMUSG00000025421	protein_coding	Hdhd2	ENSMUST00000097521	protein_coding		18	1	76944127	1704
ENSMUSG00000111920	processed_pseudogene	Gm7370	ENSMUST00000219471	processed_pseudogene		12	-1	44203171	767
ENSMUSG00000037722	protein_coding	Gnpnat1	ENSMUST00000226276	protein_coding		14	-1	45388793	710
ENSMUSG00000037149	protein_coding	Ddx1	ENSMUST00000221028	retained_intron		12	-1	13229379	667
ENSMUSG00000034761	protein_coding	Map4k5	ENSMUST00000124715	retained_intron		12	-1	69874334	1373
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000113726	protein_coding	principal3	5	-1	66098191	4703
ENSMUSG00000037722	protein_coding	Gnpnat1	ENSMUST00000227865	protein_coding		14	-1	45388783	709
ENSMUSG00000118450	unprocessed_pseudogene	Gm50480	ENSMUST00000238516	unprocessed_pseudogene		7	-1	27049038	341
ENSMUSG00000037149	protein_coding	Ddx1	ENSMUST00000221623	protein_coding		12	-1	13249163	724
ENSMUSG00000030660	protein_coding	Pik3c2a	ENSMUST00000205378	nonsense_mediated_decay		7	-1	116443447	1710
ENSMUSG00000037017	protein_coding	Zscan21	ENSMUST00000110960	protein_coding	principal1	5	1	138116937	2204
ENSMUSG00000034761	protein_coding	Map4k5	ENSMUST00000133688	retained_intron		12	-1	69893123	1885
ENSMUSG00000051498	protein_coding	Tlr6	ENSMUST00000062315	protein_coding	alternative2	5	-1	64960047	3677
ENSMUSG00000015659	protein_coding	Serac1	ENSMUST00000153325	processed_transcript		17	-1	6050055	688
ENSMUSG00000035105	protein_coding	Egln3	ENSMUST00000039516	protein_coding	principal1	12	-1	54203860	2662
ENSMUSG00000025421	protein_coding	Hdhd2	ENSMUST00000145634	protein_coding	principal1	18	1	76944144	1538
ENSMUSG00000021738	protein_coding	Atxn7	ENSMUST00000022257	protein_coding	principal2	14	1	14012491	6853
ENSMUSG00000028464	protein_coding	Tpm2	ENSMUST00000107914	protein_coding	alternative1	4	-1	43523595	1164
ENSMUSG00000108682	processed_pseudogene	Gm29754	ENSMUST00000206269	processed_pseudogene		7	1	27067456	358
ENSMUSG00000034761	protein_coding	Map4k5	ENSMUST00000147451	retained_intron		12	-1	69856424	874
ENSMUSG00000033276	protein_coding	Stk36	ENSMUST00000155473	processed_transcript		1	1	74622830	2874
ENSMUSG00000037722	protein_coding	Gnpnat1	ENSMUST00000226856	protein_coding		14	-1	45388790	681
ENSMUSG00000025421	protein_coding	Hdhd2	ENSMUST00000026485	protein_coding	principal1	18	1	76944384	1640
ENSMUSG00000063904	protein_coding	Dpp3	ENSMUST00000025851	protein_coding	principal1	19	-1	4928287	2683
ENSMUSG00000037017	protein_coding	Zscan21	ENSMUST00000142185	protein_coding		5	1	138116980	496
ENSMUSG00000028464	protein_coding	Tpm2	ENSMUST00000133355	processed_transcript		4	-1	43519669	337
ENSMUSG00000051498	protein_coding	Tlr6	ENSMUST00000201307	protein_coding		5	-1	64960097	446
ENSMUSG00000030660	protein_coding	Pik3c2a	ENSMUST00000205767	retained_intron		7	-1	116443439	3849
ENSMUSG00000030107	protein_coding	Usp18	ENSMUST00000032198	protein_coding	principal1	6	1	121245906	1771
ENSMUSG00000033276	protein_coding	Stk36	ENSMUST00000123154	retained_intron		1	1	74626465	3016
ENSMUSG00000037722	protein_coding	Gnpnat1	ENSMUST00000228304	protein_coding		14	-1	45404885	462
ENSMUSG00000028464	protein_coding	Tpm2	ENSMUST00000150592	protein_coding		4	-1	43523765	401
ENSMUSG00000037017	protein_coding	Zscan21	ENSMUST00000136425	protein_coding		5	1	138116982	754
ENSMUSG00000015659	protein_coding	Serac1	ENSMUST00000024570	protein_coding	principal3	17	-1	6079727	2033
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000201544	protein_coding	principal3	5	-1	66173118	5211
ENSMUSG00000085319	antisense	Gm13330	ENSMUST00000136400	antisense		2	1	18032533	388
ENSMUSG00000037722	protein_coding	Gnpnat1	ENSMUST00000226973	retained_intron		14	-1	45384652	619
ENSMUSG00000027742	protein_coding	Cog6	ENSMUST00000192788	retained_intron		3	-1	53017210	1504
ENSMUSG00000030107	protein_coding	Usp18	ENSMUST00000203250	retained_intron		6	1	121253800	556
ENSMUSG00000025421	protein_coding	Hdhd2	ENSMUST00000150990	protein_coding	principal1	18	1	76944384	3126
ENSMUSG00000073952	protein_coding	Olfr597	ENSMUST00000216456	protein_coding	principal1	7	1	103316315	2727
ENSMUSG00000021738	protein_coding	Atxn7	ENSMUST00000225164	retained_intron		14	1	14013144	534
ENSMUSG00000051498	protein_coding	Tlr6	ENSMUST00000239485	protein_coding	principal2	5	-1	64960048	2603
ENSMUSG00000037722	protein_coding	Gnpnat1	ENSMUST00000228003	protein_coding		14	-1	45404913	373
ENSMUSG00000027742	protein_coding	Cog6	ENSMUST00000193043	retained_intron		3	-1	53017212	773
ENSMUSG00000063904	protein_coding	Dpp3	ENSMUST00000235781	nonsense_mediated_decay		19	-1	4927063	2556
ENSMUSG00000030107	protein_coding	Usp18	ENSMUST00000204926	retained_intron		6	1	121261409	717
ENSMUSG00000015659	protein_coding	Serac1	ENSMUST00000144284	retained_intron		17	-1	6051388	698
ENSMUSG00000078511	protein_coding	Pramef25	ENSMUST00000105766	protein_coding	principal1	4	-1	143951016	1684
ENSMUSG00000108101	sense_intronic	Gm45738	ENSMUST00000203645	sense_intronic		6	-1	48045955	233
ENSMUSG00000037722	protein_coding	Gnpnat1	ENSMUST00000226590	protein_coding		14	-1	45388741	636
ENSMUSG00000073952	protein_coding	Olfr597	ENSMUST00000098203	protein_coding	principal1	7	1	103320413	948
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000176565	protein_coding		6	-1	99520997	3727
ENSMUSG00000112821	lincRNA	1700104L18Rik	ENSMUST00000220132	lincRNA		12	1	54233615	598
ENSMUSG00000021738	protein_coding	Atxn7	ENSMUST00000224370	processed_transcript		14	1	14013144	392
ENSMUSG00000030107	protein_coding	Usp18	ENSMUST00000204710	protein_coding		6	1	121268549	496
ENSMUSG00000015659	protein_coding	Serac1	ENSMUST00000139542	processed_transcript		17	-1	6079733	627
ENSMUSG00000025421	protein_coding	Hdhd2	ENSMUST00000148955	protein_coding	principal1	18	1	76944437	3069
ENSMUSG00000054057	protein_coding	A930004D18Rik	ENSMUST00000066163	protein_coding	principal1	2	-1	18037737	3217
ENSMUSG00000037017	protein_coding	Zscan21	ENSMUST00000110959	protein_coding	principal1	5	1	138117041	2964
ENSMUSG00000021738	protein_coding	Atxn7	ENSMUST00000226073	processed_transcript		14	1	14013144	492
ENSMUSG00000090465	processed_pseudogene	Gm3091	ENSMUST00000163408	processed_pseudogene		14	-1	4793196	484
ENSMUSG00000112705	lincRNA	Gm47552	ENSMUST00000217997	lincRNA		12	-1	54317015	384
ENSMUSG00000063904	protein_coding	Dpp3	ENSMUST00000236782	retained_intron		19	-1	4915067	917
ENSMUSG00000050890	protein_coding	Pdik1l	ENSMUST00000105876	protein_coding	principal1	4	-1	134287253	4509
ENSMUSG00000107736	lincRNA	Gm44148	ENSMUST00000203718	lincRNA		6	-1	121272685	316
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000094757	protein_coding	principal3	5	-1	66081000	4643
ENSMUSG00000054057	protein_coding	A930004D18Rik	ENSMUST00000135980	processed_transcript		2	-1	18028760	363
ENSMUSG00000021738	protein_coding	Atxn7	ENSMUST00000224616	retained_intron		14	1	14087469	766
ENSMUSG00000113970	lincRNA	Gm7550	ENSMUST00000223334	lincRNA		12	-1	54391318	282
ENSMUSG00000026083	protein_coding	Eif5b	ENSMUST00000192548	retained_intron		1	1	37998129	5788
ENSMUSG00000028464	protein_coding	Tpm2	ENSMUST00000107913	protein_coding	principal3	4	-1	43523388	2098
ENSMUSG00000054057	protein_coding	A930004D18Rik	ENSMUST00000151857	processed_transcript		2	-1	18028871	426
ENSMUSG00000078510	protein_coding	Gm13101	ENSMUST00000105763	protein_coding	principal1	4	-1	143966950	1678
ENSMUSG00000112053	lincRNA	Gm46328	ENSMUST00000217924	lincRNA		12	1	54400176	976
ENSMUSG00000026083	protein_coding	Eif5b	ENSMUST00000193806	retained_intron		1	1	38041791	479
ENSMUSG00000021738	protein_coding	Atxn7	ENSMUST00000223932	retained_intron		14	1	14095362	1081
ENSMUSG00000101283	unprocessed_pseudogene	Gm29314	ENSMUST00000186800	unprocessed_pseudogene		Y	-1	77178986	615
ENSMUSG00000112204	processed_pseudogene	Gm47553	ENSMUST00000219134	processed_pseudogene		12	1	54428077	480
ENSMUSG00000026083	protein_coding	Eif5b	ENSMUST00000193151	processed_transcript		1	1	38042866	578
ENSMUSG00000026083	protein_coding	Eif5b	ENSMUST00000195664	retained_intron		1	1	38044634	690
ENSMUSG00000050890	protein_coding	Pdik1l	ENSMUST00000145006	protein_coding		4	-1	134287225	657
ENSMUSG00000114047	processed_pseudogene	Gm7557	ENSMUST00000221935	processed_pseudogene		12	-1	54430398	865
ENSMUSG00000091494	protein_coding	Gm3269	ENSMUST00000166025	protein_coding	principal5	14	1	4838106	1758
ENSMUSG00000071477	protein_coding	Zfp777	ENSMUST00000095944	protein_coding	alternative2	6	-1	48048911	3184
ENSMUSG00000100907	unprocessed_pseudogene	Gm29310	ENSMUST00000185468	unprocessed_pseudogene		Y	-1	77215922	696
ENSMUSG00000050890	protein_coding	Pdik1l	ENSMUST00000127857	protein_coding		4	-1	134287250	573
ENSMUSG00000102741	processed_pseudogene	Gm2979	ENSMUST00000193442	processed_pseudogene		3	1	30974649	463
ENSMUSG00000021738	protein_coding	Atxn7	ENSMUST00000224315	protein_coding		14	1	14095844	779
ENSMUSG00000099469	unprocessed_pseudogene	Gm29141	ENSMUST00000190357	unprocessed_pseudogene		1	1	103363986	882
ENSMUSG00000103804	sense_intronic	Gm37062	ENSMUST00000195028	sense_intronic		1	-1	38077305	701
ENSMUSG00000091494	protein_coding	Gm3269	ENSMUST00000178137	protein_coding	alternative2	14	1	4838111	618
ENSMUSG00000116688	processed_pseudogene	Gm49720	ENSMUST00000231488	processed_pseudogene		17	1	14413490	457
ENSMUSG00000113947	lincRNA	Gm10465	ENSMUST00000223133	lincRNA		12	-1	54517079	3334
ENSMUSG00000118105	processed_pseudogene	Gm17814	ENSMUST00000237108	processed_pseudogene		17	1	26073146	843
ENSMUSG00000050890	protein_coding	Pdik1l	ENSMUST00000142504	processed_transcript		4	-1	134287225	1039
ENSMUSG00000086127	processed_transcript	Gm11934	ENSMUST00000132553	processed_transcript		4	-1	33310137	1536
ENSMUSG00000071477	protein_coding	Zfp777	ENSMUST00000148362	protein_coding		6	-1	48044243	736
ENSMUSG00000116801	lincRNA	Gm38551	ENSMUST00000232609	lincRNA		17	1	14449571	1581
ENSMUSG00000063904	protein_coding	Dpp3	ENSMUST00000235191	retained_intron		19	-1	4928247	4508
ENSMUSG00000102325	TEC	Gm37789	ENSMUST00000192862	TEC		1	1	103724345	2889
ENSMUSG00000034761	protein_coding	Map4k5	ENSMUST00000171211	protein_coding		12	-1	69893103	4334
ENSMUSG00000071477	protein_coding	Zfp777	ENSMUST00000147281	protein_coding		6	-1	48048114	668
ENSMUSG00000112145	processed_pseudogene	Gm6218	ENSMUST00000219812	processed_pseudogene		12	1	54622590	628
ENSMUSG00000063904	protein_coding	Dpp3	ENSMUST00000235777	retained_intron		19	-1	4915103	2746
ENSMUSG00000060376	protein_coding	Bckdha	ENSMUST00000071329	protein_coding	principal1	7	-1	25658981	1899
ENSMUSG00000101297	processed_pseudogene	Gm18447	ENSMUST00000187501	processed_pseudogene		1	1	104311721	307
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000200775	protein_coding	principal3	5	-1	66151078	3180
ENSMUSG00000031767	protein_coding	Nudt7	ENSMUST00000073521	protein_coding	principal3	8	1	114133557	3543
ENSMUSG00000054594	protein_coding	Oscar	ENSMUST00000039507	protein_coding	principal3	7	-1	3616133	1823
ENSMUSG00000071477	protein_coding	Zfp777	ENSMUST00000125385	protein_coding		6	-1	48047794	420
ENSMUSG00000034761	protein_coding	Map4k5	ENSMUST00000049239	protein_coding	alternative1	12	-1	69893163	4452
ENSMUSG00000063904	protein_coding	Dpp3	ENSMUST00000237930	retained_intron		19	-1	4921392	825
ENSMUSG00000100059	processed_pseudogene	Gm29140	ENSMUST00000190187	processed_pseudogene		1	-1	104471416	476
ENSMUSG00000092216	protein_coding	Gm19345	ENSMUST00000172815	protein_coding	principal1	7	1	19852003	993
ENSMUSG00000050994	protein_coding	Adgb	ENSMUST00000148816	nonsense_mediated_decay		10	-1	10411744	3612
ENSMUSG00000079357	protein_coding	Gm11100	ENSMUST00000112652	protein_coding	principal5	14	1	13918334	3635
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000094756	protein_coding	alternative2	5	-1	66151078	2973
ENSMUSG00000063904	protein_coding	Dpp3	ENSMUST00000236496	protein_coding		19	-1	4926816	556
ENSMUSG00000099464	processed_pseudogene	Gm5260	ENSMUST00000186157	processed_pseudogene		1	1	104513001	949
ENSMUSG00000118143	processed_pseudogene	Gm50124	ENSMUST00000237199	processed_pseudogene		18	1	45198823	274
ENSMUSG00000031767	protein_coding	Nudt7	ENSMUST00000066514	protein_coding	alternative2	8	1	114133574	935
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000113724	protein_coding	principal3	5	-1	66081099	2186
ENSMUSG00000054594	protein_coding	Oscar	ENSMUST00000108645	protein_coding	alternative2	7	-1	3616157	1829
ENSMUSG00000100935	unprocessed_pseudogene	Gm29592	ENSMUST00000189434	unprocessed_pseudogene		1	1	104609524	370
ENSMUSG00000054594	protein_coding	Oscar	ENSMUST00000148012	protein_coding	alternative2	7	-1	3616157	1796
ENSMUSG00000071477	protein_coding	Zfp777	ENSMUST00000114583	protein_coding	principal3	6	-1	48048114	3111
ENSMUSG00000079357	protein_coding	Gm11100	ENSMUST00000159275	protein_coding	alternative2	14	1	13932754	1417
ENSMUSG00000063904	protein_coding	Dpp3	ENSMUST00000236955	processed_transcript		19	-1	4927063	806
ENSMUSG00000031767	protein_coding	Nudt7	ENSMUST00000109109	protein_coding	alternative2	8	1	114133618	2795
ENSMUSG00000054594	protein_coding	Oscar	ENSMUST00000148645	processed_transcript		7	-1	3616085	388
ENSMUSG00000026389	protein_coding	Steap3	ENSMUST00000112641	protein_coding	principal1	1	-1	120271082	5158
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000202794	retained_intron		5	-1	66150956	2398
ENSMUSG00000078509	protein_coding	Pramef17	ENSMUST00000105762	protein_coding	principal1	4	-1	143994369	1753
ENSMUSG00000063904	protein_coding	Dpp3	ENSMUST00000237394	protein_coding		19	-1	4928210	726
ENSMUSG00000110940	unprocessed_pseudogene	Olfr274-ps1	ENSMUST00000216601	unprocessed_pseudogene		4	-1	52843046	595
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000200852	protein_coding		5	-1	66054552	703
ENSMUSG00000083022	processed_pseudogene	Rps15a-ps6	ENSMUST00000117476	processed_pseudogene		11	-1	6173036	393
ENSMUSG00000079357	protein_coding	Gm11100	ENSMUST00000238865	protein_coding		14	1	13932894	418
ENSMUSG00000026389	protein_coding	Steap3	ENSMUST00000112639	protein_coding	principal1	1	-1	120270423	2931
ENSMUSG00000031767	protein_coding	Nudt7	ENSMUST00000147605	protein_coding		8	1	114133641	966
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000201311	processed_transcript		5	-1	66081990	504
ENSMUSG00000063904	protein_coding	Dpp3	ENSMUST00000236758	protein_coding		19	-1	4927986	505
ENSMUSG00000083209	processed_pseudogene	Gm11969	ENSMUST00000118848	processed_pseudogene		11	-1	6183034	356
ENSMUSG00000112453	unprocessed_pseudogene	Gm4781	ENSMUST00000167995	unprocessed_pseudogene		10	-1	100397070	781
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000202700	protein_coding		5	-1	66080984	332
ENSMUSG00000007872	protein_coding	Id3	ENSMUST00000008016	protein_coding	principal1	4	1	136143497	1278
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000201561	protein_coding		5	-1	66151323	530
ENSMUSG00000021066	protein_coding	Atl1	ENSMUST00000222141	retained_intron		12	1	69892614	6025
ENSMUSG00000031767	protein_coding	Nudt7	ENSMUST00000134593	protein_coding	alternative2	8	1	114133642	707
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000201605	processed_transcript		5	-1	66151788	452
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000032179	protein_coding	principal2	6	-1	91116829	7037
ENSMUSG00000087480	antisense	Gm15910	ENSMUST00000127564	antisense		10	1	120857629	2971
ENSMUSG00000026389	protein_coding	Steap3	ENSMUST00000112640	protein_coding	principal1	1	-1	120265284	2752
ENSMUSG00000007872	protein_coding	Id3	ENSMUST00000151001	retained_intron		4	1	136143864	738
ENSMUSG00000086444	antisense	Gm15961	ENSMUST00000156090	antisense		10	1	120800677	266
ENSMUSG00000014686	protein_coding	Ceacam16	ENSMUST00000014830	protein_coding	principal1	7	-1	19861299	1635
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000142951	protein_coding		6	-1	91055384	3449
ENSMUSG00000007872	protein_coding	Id3	ENSMUST00000133946	processed_transcript		4	1	136144974	277
ENSMUSG00000026389	protein_coding	Steap3	ENSMUST00000140490	protein_coding		1	-1	120265255	1288
ENSMUSG00000071629	protein_coding	Olfr1477	ENSMUST00000217001	protein_coding	principal1	19	1	13500546	4000
ENSMUSG00000026102	protein_coding	Inpp1	ENSMUST00000027271	protein_coding	principal1	1	-1	52817688	5767
ENSMUSG00000014686	protein_coding	Ceacam16	ENSMUST00000208198	protein_coding		7	-1	19856236	488
ENSMUSG00000071629	protein_coding	Olfr1477	ENSMUST00000214274	protein_coding	principal1	19	1	13501117	3913
ENSMUSG00000026389	protein_coding	Steap3	ENSMUST00000112643	protein_coding		1	-1	120272705	2873
ENSMUSG00000073951	protein_coding	Olfr598	ENSMUST00000214765	protein_coding	principal1	7	1	103323568	2026
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000113509	protein_coding	alternative2	6	-1	91116819	6893
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000201670	processed_transcript		5	-1	66151782	464
ENSMUSG00000109184	unprocessed_pseudogene	Olfr1478-ps1	ENSMUST00000208393	unprocessed_pseudogene		19	1	13505325	391
ENSMUSG00000086117	lincRNA	Gm12065	ENSMUST00000149592	lincRNA		11	-1	24202624	656
ENSMUSG00000026307	protein_coding	Scly	ENSMUST00000027532	protein_coding	principal1	1	1	91298338	2202
ENSMUSG00000073951	protein_coding	Olfr598	ENSMUST00000098202	protein_coding	principal1	7	1	103328488	960
ENSMUSG00000026102	protein_coding	Inpp1	ENSMUST00000177279	nonsense_mediated_decay		1	-1	52799488	1130
ENSMUSG00000028300	protein_coding	C9orf72	ENSMUST00000084724	protein_coding		4	-1	35226123	3413
ENSMUSG00000070780	protein_coding	Rbm47	ENSMUST00000167950	protein_coding	principal3	5	-1	66151924	4895
ENSMUSG00000026102	protein_coding	Inpp1	ENSMUST00000159607	retained_intron		1	-1	52795048	916
ENSMUSG00000085579	lincRNA	Gm12066	ENSMUST00000123592	lincRNA		11	1	24201418	443
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000123340	processed_transcript		6	-1	91017429	369
ENSMUSG00000006288	protein_coding	Ttc5	ENSMUST00000006451	protein_coding	principal1	14	-1	50785519	1842
ENSMUSG00000095606	protein_coding	Gm21258	ENSMUST00000191553	protein_coding	principal5	Y	1	52780040	923
ENSMUSG00000095606	protein_coding	Gm21258	ENSMUST00000178673	protein_coding	alternative2	Y	1	52781462	567
ENSMUSG00000107304	TEC	Gm43775	ENSMUST00000201019	TEC		5	-1	66072895	3395
ENSMUSG00000026102	protein_coding	Inpp1	ENSMUST00000162576	protein_coding		1	-1	52817568	376
ENSMUSG00000024679	protein_coding	Ms4a6d	ENSMUST00000025582	protein_coding	principal1	19	-1	11604849	1418
ENSMUSG00000049648	protein_coding	Olfr273	ENSMUST00000107670	protein_coding	principal1	4	-1	52859227	4796
ENSMUSG00000115245	lincRNA	4930478E11Rik	ENSMUST00000227127	lincRNA		15	-1	54986863	1089
ENSMUSG00000115245	lincRNA	4930478E11Rik	ENSMUST00000227150	lincRNA		15	-1	54986891	1635
ENSMUSG00000034295	protein_coding	Fhod3	ENSMUST00000037097	protein_coding	principal2	18	1	24709445	5409
ENSMUSG00000006288	protein_coding	Ttc5	ENSMUST00000227751	nonsense_mediated_decay		14	-1	50772306	497
ENSMUSG00000026102	protein_coding	Inpp1	ENSMUST00000162351	retained_intron		1	-1	52817451	425
ENSMUSG00000049648	protein_coding	Olfr273	ENSMUST00000215274	nonsense_mediated_decay		4	-1	52859236	4358
ENSMUSG00000115245	lincRNA	4930478E11Rik	ENSMUST00000227829	lincRNA		15	-1	54986854	810
ENSMUSG00000026102	protein_coding	Inpp1	ENSMUST00000159725	protein_coding		1	-1	52800371	541
ENSMUSG00000034295	protein_coding	Fhod3	ENSMUST00000234526	protein_coding	alternative2	18	1	24709445	5313
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000141952	retained_intron		6	-1	91025506	799
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000177437	protein_coding		6	-1	99028258	2468
ENSMUSG00000034295	protein_coding	Fhod3	ENSMUST00000234834	protein_coding	alternative2	18	1	24709445	4956
ENSMUSG00000114990	processed_pseudogene	Gm49036	ENSMUST00000228553	processed_pseudogene		15	1	54986583	515
ENSMUSG00000049648	protein_coding	Olfr273	ENSMUST00000051520	protein_coding	principal1	4	-1	52856572	1059
ENSMUSG00000026307	protein_coding	Scly	ENSMUST00000123651	retained_intron		1	1	91298360	945
ENSMUSG00000024679	protein_coding	Ms4a6d	ENSMUST00000155669	processed_transcript		19	-1	11593373	599
ENSMUSG00000006288	protein_coding	Ttc5	ENSMUST00000227327	retained_intron		14	-1	50777430	509
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000148397	processed_transcript		6	-1	91024049	420
ENSMUSG00000034295	protein_coding	Fhod3	ENSMUST00000234199	processed_transcript		18	1	25124361	368
ENSMUSG00000026307	protein_coding	Scly	ENSMUST00000142488	protein_coding		1	1	91298368	763
ENSMUSG00000108887	unprocessed_pseudogene	Olfr1479-ps1	ENSMUST00000207752	unprocessed_pseudogene		19	1	13511526	382
ENSMUSG00000024679	protein_coding	Ms4a6d	ENSMUST00000125291	protein_coding		19	-1	11593155	679
ENSMUSG00000006288	protein_coding	Ttc5	ENSMUST00000228440	nonsense_mediated_decay		14	-1	50785499	775
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000153350	retained_intron		6	-1	91030258	751
ENSMUSG00000118174	processed_pseudogene	Gm3188	ENSMUST00000237848	processed_pseudogene		19	-1	13515138	2584
ENSMUSG00000024679	protein_coding	Ms4a6d	ENSMUST00000135351	retained_intron		19	-1	11593015	460
ENSMUSG00000006288	protein_coding	Ttc5	ENSMUST00000226768	protein_coding		14	-1	50785495	2366
ENSMUSG00000110756	unprocessed_pseudogene	Gm47786	ENSMUST00000216707	unprocessed_pseudogene		4	1	52878008	606
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000139051	processed_transcript		6	-1	91053620	640
ENSMUSG00000006288	protein_coding	Ttc5	ENSMUST00000227934	retained_intron		14	-1	50785493	2058
ENSMUSG00000036907	protein_coding	C1ql2	ENSMUST00000037286	protein_coding	principal1	1	1	120340582	2000
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000151437	processed_transcript		6	-1	91065844	621
ENSMUSG00000085121	lincRNA	5730437C11Rik	ENSMUST00000155540	lincRNA		3	-1	98941256	242
ENSMUSG00000111620	unprocessed_pseudogene	Gm31848	ENSMUST00000217387	unprocessed_pseudogene		10	1	39936855	1217
ENSMUSG00000042357	protein_coding	Gjb5	ENSMUST00000046498	protein_coding	principal1	4	-1	127358181	1721
ENSMUSG00000026645	protein_coding	Olah	ENSMUST00000027955	protein_coding	principal1	2	-1	3366591	1533
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000204740	retained_intron		6	-1	91098622	488
ENSMUSG00000026307	protein_coding	Scly	ENSMUST00000154045	nonsense_mediated_decay		1	1	91298369	819
ENSMUSG00000030091	protein_coding	Nup210	ENSMUST00000203434	retained_intron		6	-1	91116796	2440
ENSMUSG00000109948	processed_pseudogene	Gm45288	ENSMUST00000210236	processed_pseudogene		8	1	78107960	151
ENSMUSG00000079998	processed_pseudogene	Gm12947	ENSMUST00000116114	processed_pseudogene		4	-1	127408798	420
ENSMUSG00000086833	lincRNA	Gm12440	ENSMUST00000155224	lincRNA		3	1	99049822	1070
ENSMUSG00000110328	processed_pseudogene	Gm45574	ENSMUST00000210921	processed_pseudogene		8	-1	78197849	331
ENSMUSG00000026645	protein_coding	Olah	ENSMUST00000194918	protein_coding	principal1	2	-1	3397210	1764
ENSMUSG00000026307	protein_coding	Scly	ENSMUST00000153621	retained_intron		1	1	91298370	2301
ENSMUSG00000026307	protein_coding	Scly	ENSMUST00000124832	protein_coding		1	1	91298404	648
ENSMUSG00000028300	protein_coding	C9orf72	ENSMUST00000108126	protein_coding		4	-1	35225834	2644
ENSMUSG00000051236	protein_coding	Msrb3	ENSMUST00000092143	protein_coding	principal1	10	-1	120899101	3843
ENSMUSG00000026645	protein_coding	Olah	ENSMUST00000115087	protein_coding	principal1	2	-1	3366569	1479
ENSMUSG00000026307	protein_coding	Scly	ENSMUST00000147523	protein_coding		1	1	91298407	747
ENSMUSG00000103786	sense_intronic	Gm37525	ENSMUST00000193499	sense_intronic		2	-1	3354004	2871
ENSMUSG00000026307	protein_coding	Scly	ENSMUST00000142802	processed_transcript		1	1	91298427	451
ENSMUSG00000028300	protein_coding	C9orf72	ENSMUST00000108127	protein_coding	principal1	4	-1	35225880	3193
ENSMUSG00000051236	protein_coding	Msrb3	ENSMUST00000139961	processed_transcript		10	-1	120850468	896
ENSMUSG00000026307	protein_coding	Scly	ENSMUST00000145843	protein_coding		1	1	91299932	304
ENSMUSG00000051236	protein_coding	Msrb3	ENSMUST00000130950	protein_coding		10	-1	120871152	561
ENSMUSG00000026307	protein_coding	Scly	ENSMUST00000137074	protein_coding		1	1	91302797	655
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000186183	lincRNA		13	1	3478230	2919
ENSMUSG00000021066	protein_coding	Atl1	ENSMUST00000021466	protein_coding	principal1	12	1	69893105	5150
ENSMUSG00000028300	protein_coding	C9orf72	ENSMUST00000142628	retained_intron		4	-1	35206130	528
ENSMUSG00000099801	processed_pseudogene	Gm29011	ENSMUST00000191059	processed_pseudogene		1	-1	104633358	712
ENSMUSG00000093673	sense_overlapping	Gm20644	ENSMUST00000176721	sense_overlapping		11	1	98285382	2063
ENSMUSG00000114482	processed_pseudogene	Gm7604	ENSMUST00000225617	processed_pseudogene		14	-1	27552158	968
ENSMUSG00000039339	transcribed_unprocessed_pseudogene	Mfsd4b2	ENSMUST00000045526	processed_transcript		10	-1	39926923	2287
ENSMUSG00000021066	protein_coding	Atl1	ENSMUST00000223456	protein_coding		12	1	69907732	626
ENSMUSG00000102254	processed_pseudogene	Gm7496	ENSMUST00000192573	processed_pseudogene		1	1	161821865	1034
ENSMUSG00000028300	protein_coding	C9orf72	ENSMUST00000156472	retained_intron		4	-1	35226175	1370
ENSMUSG00000021066	protein_coding	Atl1	ENSMUST00000222246	retained_intron		12	1	69946177	815
ENSMUSG00000039339	transcribed_unprocessed_pseudogene	Mfsd4b2	ENSMUST00000238884	processed_transcript		10	-1	39937313	2230
ENSMUSG00000028300	protein_coding	C9orf72	ENSMUST00000130538	processed_transcript		4	-1	35226123	703
ENSMUSG00000021066	protein_coding	Atl1	ENSMUST00000220935	retained_intron		12	1	69958406	1512
ENSMUSG00000028300	protein_coding	C9orf72	ENSMUST00000149138	processed_transcript		4	-1	35226123	727
ENSMUSG00000039339	transcribed_unprocessed_pseudogene	Mfsd4b2	ENSMUST00000239105	transcribed_unprocessed_pseudogene		10	-1	39926949	1733
ENSMUSG00000099529	unprocessed_pseudogene	Gm29390	ENSMUST00000188709	unprocessed_pseudogene		Y	-1	88886606	696
ENSMUSG00000113896	processed_pseudogene	Gm18591	ENSMUST00000220568	processed_pseudogene		12	1	39208892	763
ENSMUSG00000114079	lincRNA	Gm47855	ENSMUST00000222574	lincRNA		12	-1	39398556	165
ENSMUSG00000034066	protein_coding	Farp2	ENSMUST00000120301	protein_coding	principal1	1	1	93512079	3937
ENSMUSG00000075044	protein_coding	Slc22a29	ENSMUST00000113298	protein_coding	principal1	19	-1	8218899	2271
ENSMUSG00000020279	protein_coding	Il9r	ENSMUST00000145401	protein_coding	principal3	11	-1	32200222	4482
ENSMUSG00000061210	protein_coding	Olfr47	ENSMUST00000215569	protein_coding	principal1	6	1	43231529	1603
ENSMUSG00000036913	protein_coding	Trim67	ENSMUST00000167588	protein_coding	principal1	8	1	124793092	8735
ENSMUSG00000034066	protein_coding	Farp2	ENSMUST00000122402	protein_coding		1	1	93512112	2816
ENSMUSG00000036775	protein_coding	Decr2	ENSMUST00000235318	processed_transcript		17	-1	26088672	1863
ENSMUSG00000038255	protein_coding	Neurod2	ENSMUST00000041685	protein_coding	principal1	11	-1	98329648	3142
ENSMUSG00000103854	TEC	Gm37250	ENSMUST00000194919	TEC		1	1	93531815	2388
ENSMUSG00000020279	protein_coding	Il9r	ENSMUST00000020518	nonsense_mediated_decay		11	-1	32200279	2798
ENSMUSG00000021067	protein_coding	Sav1	ENSMUST00000021467	protein_coding	principal1	12	-1	69987002	2524
ENSMUSG00000061210	protein_coding	Olfr47	ENSMUST00000078057	protein_coding	principal1	6	1	43235578	1059
ENSMUSG00000036913	protein_coding	Trim67	ENSMUST00000211867	nonsense_mediated_decay		8	1	124793092	5705
ENSMUSG00000036913	protein_coding	Trim67	ENSMUST00000041106	protein_coding	principal1	8	1	124793092	5694
ENSMUSG00000021067	protein_coding	Sav1	ENSMUST00000220735	retained_intron		12	-1	69977883	3360
ENSMUSG00000113343	lincRNA	Gm34923	ENSMUST00000222673	lincRNA		12	-1	39526955	5043
ENSMUSG00000021067	protein_coding	Sav1	ENSMUST00000222827	retained_intron		12	-1	69984257	1145
ENSMUSG00000025916	protein_coding	Ppp1r42	ENSMUST00000147000	protein_coding		1	-1	9985692	541
ENSMUSG00000113497	processed_pseudogene	Gm18030	ENSMUST00000222163	processed_pseudogene		12	1	69819647	731
ENSMUSG00000075044	protein_coding	Slc22a29	ENSMUST00000142517	processed_transcript		19	-1	8170045	782
ENSMUSG00000113384	lincRNA	Gm47859	ENSMUST00000220472	lincRNA		12	-1	39521395	452
ENSMUSG00000040048	protein_coding	Ndufb10	ENSMUST00000141324	retained_intron		17	-1	24722649	430
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000027251	protein_coding	principal1	1	-1	38129662	4262
ENSMUSG00000040048	protein_coding	Ndufb10	ENSMUST00000144285	retained_intron		17	-1	24722906	553
ENSMUSG00000076564	IG_V_gene	Igkv12-46	ENSMUST00000103365	IG_V_gene	principal1	6	-1	69765022	377
ENSMUSG00000018171	protein_coding	Vmp1	ENSMUST00000018315	protein_coding	principal1	11	-1	86683836	2787
ENSMUSG00000040048	protein_coding	Ndufb10	ENSMUST00000129451	retained_intron		17	-1	24724420	834
ENSMUSG00000027932	protein_coding	Slc27a3	ENSMUST00000029541	protein_coding	principal1	3	-1	90389927	2259
ENSMUSG00000020279	protein_coding	Il9r	ENSMUST00000128311	protein_coding	alternative2	11	-1	32200236	1757
ENSMUSG00000050994	protein_coding	Adgb	ENSMUST00000172530	protein_coding	principal5	10	-1	10472326	5215
ENSMUSG00000075044	protein_coding	Slc22a29	ENSMUST00000140910	processed_transcript		19	-1	8218900	2059
ENSMUSG00000057469	protein_coding	E2f6	ENSMUST00000220794	nonsense_mediated_decay		12	1	16810963	2694
ENSMUSG00000027932	protein_coding	Slc27a3	ENSMUST00000132041	protein_coding		3	-1	90389664	2016
ENSMUSG00000020279	protein_coding	Il9r	ENSMUST00000142396	protein_coding	alternative2	11	-1	32200222	1542
ENSMUSG00000075044	protein_coding	Slc22a29	ENSMUST00000149182	processed_transcript		19	-1	8218839	1640
ENSMUSG00000050994	protein_coding	Adgb	ENSMUST00000208717	protein_coding	alternative2	10	-1	10472314	4902
ENSMUSG00000036775	protein_coding	Decr2	ENSMUST00000137672	nonsense_mediated_decay		17	-1	26090329	2167
ENSMUSG00000057469	protein_coding	E2f6	ENSMUST00000220707	retained_intron		12	1	16810969	3018
ENSMUSG00000020279	protein_coding	Il9r	ENSMUST00000131979	retained_intron		11	-1	32200279	605
ENSMUSG00000018171	protein_coding	Vmp1	ENSMUST00000123590	processed_transcript		11	-1	86602263	749
ENSMUSG00000024269	protein_coding	Tpgs2	ENSMUST00000148255	protein_coding	alternative2	18	-1	25168694	3424
ENSMUSG00000108190	antisense	Gm44731	ENSMUST00000203086	antisense		6	-1	43265855	542
ENSMUSG00000109748	lincRNA	Gm35392	ENSMUST00000209934	lincRNA		8	1	15375639	2121
ENSMUSG00000094094	IG_V_gene	Igkv5-45	ENSMUST00000103366	IG_V_gene	principal1	6	-1	69776344	385
ENSMUSG00000110288	processed_pseudogene	Gm45678	ENSMUST00000210509	processed_pseudogene		8	1	15437866	295
ENSMUSG00000050994	protein_coding	Adgb	ENSMUST00000045328	protein_coding		10	-1	10429839	1893
ENSMUSG00000053838	protein_coding	Nudcd3	ENSMUST00000066496	protein_coding	principal1	11	-1	6200415	3927
ENSMUSG00000027932	protein_coding	Slc27a3	ENSMUST00000144572	retained_intron		3	-1	90389938	2487
ENSMUSG00000018171	protein_coding	Vmp1	ENSMUST00000145846	processed_transcript		11	-1	86586994	931
ENSMUSG00000050994	protein_coding	Adgb	ENSMUST00000132573	protein_coding		10	-1	10472326	2269
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000194650	retained_intron		1	-1	38088132	3576
ENSMUSG00000109839	TEC	Gm45677	ENSMUST00000209975	TEC		8	1	15537582	1341
ENSMUSG00000027932	protein_coding	Slc27a3	ENSMUST00000127064	processed_transcript		3	-1	90389630	583
ENSMUSG00000018171	protein_coding	Vmp1	ENSMUST00000150176	processed_transcript		11	-1	86586881	393
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000154584	protein_coding	principal3	15	-1	75909355	2312
ENSMUSG00000027932	protein_coding	Slc27a3	ENSMUST00000153978	retained_intron		3	-1	90388981	591
ENSMUSG00000118078	lincRNA	Gm50228	ENSMUST00000237179	lincRNA		18	1	65414999	525
ENSMUSG00000073103	lincRNA	Gm10466	ENSMUST00000101450	lincRNA		11	-1	24730722	2466
ENSMUSG00000040048	protein_coding	Ndufb10	ENSMUST00000045602	protein_coding	principal1	17	-1	24724478	732
ENSMUSG00000018171	protein_coding	Vmp1	ENSMUST00000153971	processed_transcript		11	-1	86602295	571
ENSMUSG00000118285	processed_pseudogene	Gm46618	ENSMUST00000238053	processed_pseudogene		18	-1	65419347	377
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000193008	retained_intron		1	-1	38054250	830
ENSMUSG00000023885	protein_coding	Thbs2	ENSMUST00000170872	protein_coding	principal1	17	-1	14694235	5895
ENSMUSG00000053838	protein_coding	Nudcd3	ENSMUST00000109805	processed_transcript		11	-1	6119409	2635
ENSMUSG00000053838	protein_coding	Nudcd3	ENSMUST00000135631	protein_coding		11	-1	6193476	2543
ENSMUSG00000018171	protein_coding	Vmp1	ENSMUST00000127267	processed_transcript		11	-1	86663573	635
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000193113	retained_intron		1	-1	38057705	393
ENSMUSG00000086892	lincRNA	4933430M04Rik	ENSMUST00000152726	lincRNA		11	1	24481909	744
ENSMUSG00000024269	protein_coding	Tpgs2	ENSMUST00000115817	protein_coding	principal3	18	-1	25169007	4159
ENSMUSG00000050994	protein_coding	Adgb	ENSMUST00000179956	protein_coding	alternative2	10	-1	10472314	5218
ENSMUSG00000010392	protein_coding	Gosr1	ENSMUST00000010536	protein_coding	principal1	11	-1	76763579	4289
ENSMUSG00000040048	protein_coding	Ndufb10	ENSMUST00000135708	protein_coding		17	-1	24724412	526
ENSMUSG00000018171	protein_coding	Vmp1	ENSMUST00000139040	processed_transcript		11	-1	86683821	420
ENSMUSG00000083257	processed_pseudogene	Gm15568	ENSMUST00000118589	processed_pseudogene		10	1	10343115	1213
ENSMUSG00000053838	protein_coding	Nudcd3	ENSMUST00000140700	retained_intron		11	-1	6193476	3093
ENSMUSG00000023885	protein_coding	Thbs2	ENSMUST00000232616	retained_intron		17	-1	14670866	2020
ENSMUSG00000112351	processed_pseudogene	Gm48326	ENSMUST00000218096	processed_pseudogene		10	-1	10465534	121
ENSMUSG00000018171	protein_coding	Vmp1	ENSMUST00000143991	protein_coding		11	-1	86671179	326
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000116238	protein_coding	principal4	10	-1	62379908	3851
ENSMUSG00000040048	protein_coding	Ndufb10	ENSMUST00000147648	processed_transcript		17	-1	24724394	516
ENSMUSG00000087085	lincRNA	Gm12068	ENSMUST00000153153	lincRNA		11	1	24426246	376
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000194815	nonsense_mediated_decay		1	-1	38083783	604
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000109972	protein_coding	alternative2	15	-1	75909334	1624
ENSMUSG00000112580	TEC	Gm47673	ENSMUST00000220387	TEC		10	-1	100433569	632
ENSMUSG00000096422	IG_V_gene	Igkv12-44	ENSMUST00000103367	IG_V_gene	principal1	6	-1	69815154	401
ENSMUSG00000047013	protein_coding	Fbxo41	ENSMUST00000159062	protein_coding	principal1	6	-1	85502994	6505
ENSMUSG00000081767	processed_pseudogene	Gm12067	ENSMUST00000119755	processed_pseudogene		11	-1	24553962	1148
ENSMUSG00000010392	protein_coding	Gosr1	ENSMUST00000137767	processed_transcript		11	-1	76763567	411
ENSMUSG00000083456	unprocessed_pseudogene	Gm13108	ENSMUST00000122287	unprocessed_pseudogene		4	1	144033631	1455
ENSMUSG00000083992	processed_pseudogene	Gm11478	ENSMUST00000117851	processed_pseudogene		11	-1	86631026	599
ENSMUSG00000099379	lincRNA	Gm28993	ENSMUST00000186236	lincRNA		Y	-1	40736976	1499
ENSMUSG00000101960	lincRNA	Gm29311	ENSMUST00000189721	lincRNA		Y	1	77257246	1532
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000193472	nonsense_mediated_decay		1	-1	38085654	777
ENSMUSG00000057469	protein_coding	E2f6	ENSMUST00000020908	protein_coding	principal1	12	1	16810977	2418
ENSMUSG00000047013	protein_coding	Fbxo41	ENSMUST00000161078	protein_coding	principal1	6	-1	85502886	6562
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000130422	protein_coding	alternative2	10	-1	62342722	2916
ENSMUSG00000052299	protein_coding	Ltn1	ENSMUST00000039449	protein_coding	principal1	16	-1	87432612	7743
ENSMUSG00000101960	lincRNA	Gm29311	ENSMUST00000189277	lincRNA		Y	1	77257917	253
ENSMUSG00000099379	lincRNA	Gm28993	ENSMUST00000188645	lincRNA		Y	-1	40736523	437
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000192697	processed_transcript		1	-1	38081361	687
ENSMUSG00000118280	lincRNA	Gm41804	ENSMUST00000235607	lincRNA		19	1	8251968	653
ENSMUSG00000073627	processed_transcript	C130036L24Rik	ENSMUST00000127284	retained_intron		1	1	86359574	1266
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000161160	retained_intron		10	-1	62290329	716
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000193922	retained_intron		1	-1	38083849	467
ENSMUSG00000118345	processed_pseudogene	Gm7105	ENSMUST00000236033	processed_pseudogene		19	-1	8257587	1364
ENSMUSG00000073950	protein_coding	Olfr599	ENSMUST00000214329	protein_coding	principal1	7	1	103335917	2183
ENSMUSG00000095179	unprocessed_pseudogene	Gm21638	ENSMUST00000179473	unprocessed_pseudogene		Y	1	77318999	836
ENSMUSG00000057469	protein_coding	E2f6	ENSMUST00000221541	nonsense_mediated_decay		12	1	16811099	2362
ENSMUSG00000052299	protein_coding	Ltn1	ENSMUST00000232095	protein_coding		16	-1	87432563	2360
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000152761	protein_coding		10	-1	62318393	784
ENSMUSG00000117877	processed_pseudogene	Gm8184	ENSMUST00000235438	processed_pseudogene		19	1	8272512	2194
ENSMUSG00000073627	processed_transcript	C130036L24Rik	ENSMUST00000137643	processed_transcript		1	1	86359584	3109
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000192594	protein_coding		1	-1	38128301	552
ENSMUSG00000087470	lincRNA	A630031M04Rik	ENSMUST00000129084	lincRNA		4	1	127474848	311
ENSMUSG00000047013	protein_coding	Fbxo41	ENSMUST00000161546	protein_coding	principal1	6	-1	85502858	6357
ENSMUSG00000057469	protein_coding	E2f6	ENSMUST00000221934	nonsense_mediated_decay		12	1	16811164	831
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000065865	protein_coding	principal1	14	-1	13961277	937
ENSMUSG00000029778	protein_coding	Adcyap1r1	ENSMUST00000070736	protein_coding	principal4	6	1	55451978	3695
ENSMUSG00000094433	IG_V_gene	Igkv5-43	ENSMUST00000103368	IG_V_gene	principal1	6	-1	69823943	379
ENSMUSG00000073627	processed_transcript	C130036L24Rik	ENSMUST00000190804	retained_intron		1	1	86359588	3185
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000193697	protein_coding		1	-1	38128317	370
ENSMUSG00000109214	lincRNA	Gm44659	ENSMUST00000207269	lincRNA		7	-1	19871438	436
ENSMUSG00000073950	protein_coding	Olfr599	ENSMUST00000098201	protein_coding	principal1	7	1	103338012	1050
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000139228	protein_coding		10	-1	62327767	896
ENSMUSG00000085993	processed_pseudogene	Gm15905	ENSMUST00000137042	processed_pseudogene		10	1	127921069	298
ENSMUSG00000087470	lincRNA	A630031M04Rik	ENSMUST00000239342	lincRNA		4	1	127474902	880
ENSMUSG00000057469	protein_coding	E2f6	ENSMUST00000222582	retained_intron		12	1	16820261	718
ENSMUSG00000079311	processed_pseudogene	Gm3222	ENSMUST00000071282	processed_pseudogene		17	1	14709066	990
ENSMUSG00000054074	protein_coding	Skida1	ENSMUST00000173604	processed_transcript		2	-1	18044572	420
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000177229	protein_coding	alternative2	6	-1	99028259	1848
ENSMUSG00000057469	protein_coding	E2f6	ENSMUST00000221600	retained_intron		12	1	16824151	712
ENSMUSG00000090036	processed_pseudogene	Gm15900	ENSMUST00000161584	processed_pseudogene		10	-1	127948560	342
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000143179	protein_coding		10	-1	62342699	379
ENSMUSG00000026082	protein_coding	Rev1	ENSMUST00000195383	protein_coding		1	-1	38129801	480
ENSMUSG00000087470	lincRNA	A630031M04Rik	ENSMUST00000239205	lincRNA		4	1	127474918	1041
ENSMUSG00000105915	IG_V_pseudogene	Igkv12-42	ENSMUST00000198769	IG_V_pseudogene		6	-1	69835241	327
ENSMUSG00000045540	protein_coding	Olfr600	ENSMUST00000215042	protein_coding	principal1	7	-1	103349669	3527
ENSMUSG00000087470	lincRNA	A630031M04Rik	ENSMUST00000143070	lincRNA		4	1	127474934	579
ENSMUSG00000112446	processed_pseudogene	Gm47949	ENSMUST00000218406	processed_pseudogene		10	1	127961556	374
ENSMUSG00000054074	protein_coding	Skida1	ENSMUST00000091420	protein_coding	principal2	2	-1	18049051	4376
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000142527	retained_intron		10	-1	62342708	2832
ENSMUSG00000002055	protein_coding	Spag5	ENSMUST00000045026	protein_coding	principal1	11	1	78301529	3887
ENSMUSG00000045540	protein_coding	Olfr600	ENSMUST00000056222	protein_coding	principal1	7	-1	103346929	948
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000187921	lincRNA		13	1	3478234	442
ENSMUSG00000082791	processed_pseudogene	Gm4875	ENSMUST00000118257	processed_pseudogene		6	1	117997207	786
ENSMUSG00000087470	lincRNA	A630031M04Rik	ENSMUST00000156401	lincRNA		4	1	127522403	988
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000181708	lincRNA		13	1	3478243	4769
ENSMUSG00000054074	protein_coding	Skida1	ENSMUST00000142856	protein_coding		2	-1	18048784	835
ENSMUSG00000044390	protein_coding	Tigd3	ENSMUST00000055911	protein_coding	principal1	19	-1	5894107	2115
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000137426	protein_coding		15	-1	75903556	1724
ENSMUSG00000095007	IG_V_gene	Igkv12-41	ENSMUST00000103369	IG_V_gene	principal1	6	-1	69858884	347
ENSMUSG00000026277	protein_coding	Stk25	ENSMUST00000027498	protein_coding	principal1	1	-1	93635722	4249
ENSMUSG00000082009	processed_pseudogene	Gm12954	ENSMUST00000118610	processed_pseudogene		4	-1	119502546	611
ENSMUSG00000087470	lincRNA	A630031M04Rik	ENSMUST00000146587	lincRNA		4	1	127545101	3568
ENSMUSG00000054074	protein_coding	Skida1	ENSMUST00000152908	protein_coding		2	-1	18049031	393
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000189464	lincRNA		13	1	3478243	868
ENSMUSG00000082814	processed_pseudogene	Gm12956	ENSMUST00000122184	processed_pseudogene		4	-1	119510061	414
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000191585	lincRNA		13	1	3478246	670
ENSMUSG00000104533	IG_V_pseudogene	Igkv5-40-1	ENSMUST00000196457	IG_V_pseudogene		6	-1	69869193	359
ENSMUSG00000029778	protein_coding	Adcyap1r1	ENSMUST00000070756	protein_coding	alternative2	6	1	55452028	6107
ENSMUSG00000020738	protein_coding	Sumo2	ENSMUST00000121185	protein_coding		11	-1	115535817	911
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000180836	lincRNA		13	1	3478255	3704
ENSMUSG00000044390	protein_coding	Tigd3	ENSMUST00000236767	protein_coding	principal1	19	-1	5894149	2155
ENSMUSG00000054074	protein_coding	Skida1	ENSMUST00000066885	protein_coding	alternative2	2	-1	18048449	2936
ENSMUSG00000080773	processed_pseudogene	Gm12955	ENSMUST00000119689	processed_pseudogene		4	-1	119520082	957
ENSMUSG00000019782	protein_coding	Rwdd1	ENSMUST00000019917	protein_coding	principal1	10	-1	34019624	1090
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000074346	protein_coding		6	-1	99163018	2118
ENSMUSG00000105955	IG_V_pseudogene	Igkv12-40	ENSMUST00000199208	IG_V_pseudogene		6	-1	69879819	347
ENSMUSG00000084379	processed_pseudogene	Gm12957	ENSMUST00000117835	processed_pseudogene		4	1	119520990	377
ENSMUSG00000071341	protein_coding	Egr4	ENSMUST00000095759	protein_coding	principal1	6	-1	85513589	2148
ENSMUSG00000020738	protein_coding	Sumo2	ENSMUST00000117589	protein_coding		11	-1	115535817	987
ENSMUSG00000101917	unprocessed_pseudogene	Gm29312	ENSMUST00000188724	unprocessed_pseudogene		Y	-1	77407051	696
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000186642	lincRNA		13	1	3478262	972
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000134877	protein_coding		10	-1	62375100	613
ENSMUSG00000087510	lincRNA	1700112K13Rik	ENSMUST00000141892	lincRNA		4	-1	127812173	701
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000113328	protein_coding		6	-1	99163018	2121
ENSMUSG00000056310	protein_coding	Tyw1	ENSMUST00000173375	retained_intron		5	1	130255619	4698
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000113324	protein_coding		6	-1	99163018	2121
ENSMUSG00000101497	unprocessed_pseudogene	Gm29391	ENSMUST00000188545	unprocessed_pseudogene		Y	-1	88916170	615
ENSMUSG00000029778	protein_coding	Adcyap1r1	ENSMUST00000166962	protein_coding		6	1	55452057	830
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000221008	lincRNA		13	1	3478267	2568
ENSMUSG00000076569	IG_V_gene	Igkv5-39	ENSMUST00000197290	IG_V_gene		6	-1	69900977	347
ENSMUSG00000091185	protein_coding	Gm3278	ENSMUST00000164459	protein_coding	principal1	14	1	4892416	1500
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000185835	lincRNA		13	1	3478277	923
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000113329	protein_coding		6	-1	99163018	1926
ENSMUSG00000076569	IG_V_gene	Igkv5-39	ENSMUST00000103370	IG_V_gene	principal1	6	-1	69900710	287
ENSMUSG00000019782	protein_coding	Rwdd1	ENSMUST00000128699	retained_intron		10	-1	34001245	397
ENSMUSG00000100870	unprocessed_pseudogene	Gm21720	ENSMUST00000187428	unprocessed_pseudogene		Y	-1	88953061	696
ENSMUSG00000105451	IG_V_pseudogene	Gm43220	ENSMUST00000199299	IG_V_pseudogene		6	-1	69927902	282
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000180567	lincRNA		13	1	3478303	593
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000135317	protein_coding		10	-1	62375100	794
ENSMUSG00000019782	protein_coding	Rwdd1	ENSMUST00000219414	processed_transcript		10	-1	34019586	883
ENSMUSG00000029778	protein_coding	Adcyap1r1	ENSMUST00000167484	protein_coding		6	1	55452177	540
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000186610	lincRNA		13	1	3478304	630
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000177230	nonsense_mediated_decay		6	-1	99163018	2198
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000190547	lincRNA		13	1	3478326	481
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000177307	protein_coding		6	-1	99163018	2121
ENSMUSG00000101694	lincRNA	Gm29392	ENSMUST00000189429	lincRNA		Y	-1	88962524	2167
ENSMUSG00000002055	protein_coding	Spag5	ENSMUST00000133579	retained_intron		11	1	78301624	2545
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000176850	protein_coding		6	-1	99435345	2339
ENSMUSG00000111905	antisense	Gm48045	ENSMUST00000218530	antisense		10	1	34018815	1948
ENSMUSG00000076570	IG_V_gene	Igkv12-38	ENSMUST00000198880	IG_V_gene	principal5	6	-1	69943648	347
ENSMUSG00000020738	protein_coding	Sumo2	ENSMUST00000118155	protein_coding		11	-1	115536181	884
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000176632	protein_coding	alternative1	6	-1	99435345	2336
ENSMUSG00000026277	protein_coding	Stk25	ENSMUST00000151068	retained_intron		1	-1	93635629	2821
ENSMUSG00000076570	IG_V_gene	Igkv12-38	ENSMUST00000103371	IG_V_gene	alternative2	6	-1	69943648	344
ENSMUSG00000097709	lincRNA	2810429I04Rik	ENSMUST00000188642	lincRNA		13	1	3498045	674
ENSMUSG00000002475	protein_coding	Abhd3	ENSMUST00000002549	protein_coding		18	-1	10706706	1247
ENSMUSG00000025916	protein_coding	Ppp1r42	ENSMUST00000124874	nonsense_mediated_decay		1	-1	10003453	1313
ENSMUSG00000026277	protein_coding	Stk25	ENSMUST00000154008	retained_intron		1	-1	93625361	705
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000175880	retained_intron		6	-1	98935545	336
ENSMUSG00000002055	protein_coding	Spag5	ENSMUST00000146068	retained_intron		11	1	78301655	2402
ENSMUSG00000033272	protein_coding	Slc35a4	ENSMUST00000050476	protein_coding	principal1	18	1	36679579	2362
ENSMUSG00000094132	protein_coding	Gm3264	ENSMUST00000166776	protein_coding	alternative2	14	1	4855576	882
ENSMUSG00000101533	lincRNA	Gm29393	ENSMUST00000187002	lincRNA		Y	1	88994450	1499
ENSMUSG00000020738	protein_coding	Sumo2	ENSMUST00000021084	nonsense_mediated_decay		11	-1	115536229	1000
ENSMUSG00000026277	protein_coding	Stk25	ENSMUST00000125778	retained_intron		1	-1	93625788	537
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000116440	protein_coding	alternative2	15	-1	75909297	896
ENSMUSG00000029778	protein_coding	Adcyap1r1	ENSMUST00000172084	protein_coding	alternative2	6	1	55460236	1344
ENSMUSG00000002055	protein_coding	Spag5	ENSMUST00000141026	retained_intron		11	1	78313115	568
ENSMUSG00000094132	protein_coding	Gm3264	ENSMUST00000166410	protein_coding	principal2	14	1	4871156	519
ENSMUSG00000026277	protein_coding	Stk25	ENSMUST00000133769	protein_coding		1	-1	93635479	854
ENSMUSG00000117700	processed_pseudogene	Gm50359	ENSMUST00000235345	processed_pseudogene		19	-1	10176161	308
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000151066	protein_coding		15	-1	75909306	704
ENSMUSG00000101533	lincRNA	Gm29393	ENSMUST00000190267	lincRNA		Y	1	88994903	438
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000124058	protein_coding		6	-1	99028313	1213
ENSMUSG00000033542	protein_coding	Arhgef5	ENSMUST00000031750	protein_coding	principal1	6	1	43265582	5469
ENSMUSG00000036775	protein_coding	Decr2	ENSMUST00000237875	protein_coding		17	-1	26090290	2064
ENSMUSG00000114018	lincRNA	Gm36495	ENSMUST00000221201	lincRNA		12	-1	16850881	684
ENSMUSG00000026277	protein_coding	Stk25	ENSMUST00000186287	protein_coding		1	-1	93658659	638
ENSMUSG00000033272	protein_coding	Slc35a4	ENSMUST00000170288	processed_transcript		18	1	36679583	403
ENSMUSG00000029778	protein_coding	Adcyap1r1	ENSMUST00000165857	protein_coding	alternative2	6	1	55460236	1491
ENSMUSG00000110392	lincRNA	Gm45676	ENSMUST00000211306	lincRNA		8	1	15581943	715
ENSMUSG00000047161	protein_coding	Chst9	ENSMUST00000053017	protein_coding	principal1	18	-1	15718046	1620
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000130091	protein_coding		10	-1	62375100	414
ENSMUSG00000002055	protein_coding	Spag5	ENSMUST00000150016	retained_intron		11	1	78315357	428
ENSMUSG00000029778	protein_coding	Adcyap1r1	ENSMUST00000167234	protein_coding	alternative2	6	1	55460236	1575
ENSMUSG00000097278	processed_transcript	Gm26650	ENSMUST00000181157	processed_transcript		14	-1	4930414	676
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000134447	protein_coding		10	-1	62375100	368
ENSMUSG00000100927	antisense	Gm28536	ENSMUST00000190971	antisense		1	1	93635193	1317
ENSMUSG00000033542	protein_coding	Arhgef5	ENSMUST00000182924	protein_coding		6	1	43274511	2938
ENSMUSG00000020738	protein_coding	Sumo2	ENSMUST00000153892	protein_coding	principal1	11	-1	115536276	1051
ENSMUSG00000110356	lincRNA	Gm35453	ENSMUST00000210304	lincRNA		8	-1	15583962	331
ENSMUSG00000033272	protein_coding	Slc35a4	ENSMUST00000168343	processed_transcript		18	1	36679592	476
ENSMUSG00000097278	processed_transcript	Gm26650	ENSMUST00000181364	processed_transcript		14	-1	4930394	677
ENSMUSG00000002055	protein_coding	Spag5	ENSMUST00000149711	retained_intron		11	1	78315900	574
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000136548	protein_coding		10	-1	62375100	471
ENSMUSG00000097278	processed_transcript	Gm26650	ENSMUST00000181881	processed_transcript		14	-1	4930394	2078
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000154489	protein_coding		10	-1	62375100	517
ENSMUSG00000033272	protein_coding	Slc35a4	ENSMUST00000036158	protein_coding	principal1	18	1	36679592	2462
ENSMUSG00000110201	TEC	Gm45675	ENSMUST00000211202	TEC		8	1	15629981	3429
ENSMUSG00000033542	protein_coding	Arhgef5	ENSMUST00000183227	retained_intron		6	1	43276938	598
ENSMUSG00000036526	protein_coding	Card11	ENSMUST00000085786	protein_coding	principal1	5	-1	141000582	4107
ENSMUSG00000097278	processed_transcript	Gm26650	ENSMUST00000181280	processed_transcript		14	-1	4930401	1293
ENSMUSG00000002475	protein_coding	Abhd3	ENSMUST00000117828	protein_coding		18	-1	10706771	1962
ENSMUSG00000002055	protein_coding	Spag5	ENSMUST00000128359	processed_transcript		11	1	78317962	369
ENSMUSG00000020738	protein_coding	Sumo2	ENSMUST00000140844	retained_intron		11	-1	115536176	680
ENSMUSG00000025916	protein_coding	Ppp1r42	ENSMUST00000027049	protein_coding	principal1	1	-1	10009136	1425
ENSMUSG00000110217	lincRNA	Gm45408	ENSMUST00000211080	lincRNA		8	1	15584723	390
ENSMUSG00000037339	protein_coding	Fam53a	ENSMUST00000065119	protein_coding	principal2	5	-1	33629635	2009
ENSMUSG00000047161	protein_coding	Chst9	ENSMUST00000130553	nonsense_mediated_decay		18	-1	15760157	1934
ENSMUSG00000033272	protein_coding	Slc35a4	ENSMUST00000185899	protein_coding		18	1	36679609	312
ENSMUSG00000095196	processed_pseudogene	Gm8305	ENSMUST00000180022	processed_pseudogene		14	-1	4923979	1195
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000140383	protein_coding		10	-1	62375100	549
ENSMUSG00000029778	protein_coding	Adcyap1r1	ENSMUST00000165786	protein_coding	alternative2	6	1	55460236	1745
ENSMUSG00000002055	protein_coding	Spag5	ENSMUST00000125477	retained_intron		11	1	78319926	707
ENSMUSG00000020738	protein_coding	Sumo2	ENSMUST00000050672	retained_intron		11	-1	115536189	397
ENSMUSG00000109757	processed_pseudogene	Gm7128	ENSMUST00000211639	processed_pseudogene		8	1	15877664	533
ENSMUSG00000037339	protein_coding	Fam53a	ENSMUST00000065162	protein_coding	alternative2	5	-1	33628912	8219
ENSMUSG00000002475	protein_coding	Abhd3	ENSMUST00000117726	protein_coding	principal1	18	-1	10706713	1890
ENSMUSG00000033272	protein_coding	Slc35a4	ENSMUST00000186538	protein_coding	principal1	18	1	36679215	2842
ENSMUSG00000002475	protein_coding	Abhd3	ENSMUST00000144150	protein_coding		18	-1	10658789	470
ENSMUSG00000002475	protein_coding	Abhd3	ENSMUST00000234419	processed_transcript		18	-1	10664318	449
ENSMUSG00000037339	protein_coding	Fam53a	ENSMUST00000150033	nonsense_mediated_decay		5	-1	33629588	2112
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000143236	protein_coding		10	-1	62379852	254
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000142164	retained_intron		6	-1	99003680	2652
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000133429	protein_coding		10	-1	62379852	435
ENSMUSG00000099725	unprocessed_pseudogene	Gm28734	ENSMUST00000188104	unprocessed_pseudogene		Y	-1	52867139	696
ENSMUSG00000033542	protein_coding	Arhgef5	ENSMUST00000183094	retained_intron		6	1	43277047	2777
ENSMUSG00000025916	protein_coding	Ppp1r42	ENSMUST00000130102	nonsense_mediated_decay		1	-1	10009130	941
ENSMUSG00000037339	protein_coding	Fam53a	ENSMUST00000045329	protein_coding	principal2	5	-1	33629622	2346
ENSMUSG00000099055	unprocessed_pseudogene	Zfp-ps	ENSMUST00000185025	unprocessed_pseudogene		7	1	14566761	478
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000132926	protein_coding		10	-1	62379852	942
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000154163	protein_coding		6	-1	99028942	853
ENSMUSG00000036526	protein_coding	Card11	ENSMUST00000196169	retained_intron		5	-1	140882205	1299
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000089680	protein_coding		15	-1	75909319	973
ENSMUSG00000037339	protein_coding	Fam53a	ENSMUST00000137705	nonsense_mediated_decay		5	-1	33629583	706
ENSMUSG00000098520	unprocessed_pseudogene	Ranbp2-ps1	ENSMUST00000184001	unprocessed_pseudogene		7	1	14616384	403
ENSMUSG00000100853	unprocessed_pseudogene	Gm28232	ENSMUST00000188683	unprocessed_pseudogene		Y	-1	52903749	315
ENSMUSG00000099242	unprocessed_pseudogene	Obox4-ps3	ENSMUST00000183474	unprocessed_pseudogene		7	1	14548714	520
ENSMUSG00000063808	protein_coding	Gpatch1	ENSMUST00000079693	protein_coding	principal1	7	-1	35318440	3065
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000149534	protein_coding		10	-1	62362274	296
ENSMUSG00000037339	protein_coding	Fam53a	ENSMUST00000153696	protein_coding		5	-1	33629599	720
ENSMUSG00000099506	lincRNA	Gm28732	ENSMUST00000189632	lincRNA		Y	-1	52908497	2167
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000123992	protein_coding		6	-1	99044459	525
ENSMUSG00000037339	protein_coding	Fam53a	ENSMUST00000155980	protein_coding		5	-1	33629062	473
ENSMUSG00000100586	protein_coding	Vmn1r90	ENSMUST00000227855	protein_coding	principal2	7	-1	14563506	7362
ENSMUSG00000025916	protein_coding	Ppp1r42	ENSMUST00000176398	protein_coding		1	-1	10009130	732
ENSMUSG00000102657	TEC	Gm37899	ENSMUST00000193116	TEC		12	1	109668869	8717
ENSMUSG00000100586	protein_coding	Vmn1r90	ENSMUST00000185220	protein_coding	principal2	7	-1	14563506	7144
ENSMUSG00000033542	protein_coding	Arhgef5	ENSMUST00000182190	retained_intron		6	1	43279457	3098
ENSMUSG00000098202	lincRNA	B830012L14Rik	ENSMUST00000239068	lincRNA		12	1	109676277	4443
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000113321	processed_transcript		6	-1	99028266	1176
ENSMUSG00000112257	TEC	Gm47623	ENSMUST00000218509	TEC		10	1	52801493	208
ENSMUSG00000037339	protein_coding	Fam53a	ENSMUST00000140043	processed_transcript		5	-1	33629605	418
ENSMUSG00000037012	protein_coding	Hk1	ENSMUST00000072357	protein_coding	principal4	10	-1	62358362	3639
ENSMUSG00000098202	lincRNA	B830012L14Rik	ENSMUST00000238810	lincRNA		12	1	109678088	5167
ENSMUSG00000063808	protein_coding	Gpatch1	ENSMUST00000131213	nonsense_mediated_decay		7	-1	35318421	2991
ENSMUSG00000033542	protein_coding	Arhgef5	ENSMUST00000182752	retained_intron		6	1	43280990	519
ENSMUSG00000100586	protein_coding	Vmn1r90	ENSMUST00000226802	protein_coding	principal2	7	-1	14563506	7185
ENSMUSG00000025916	protein_coding	Ppp1r42	ENSMUST00000155163	retained_intron		1	-1	10009130	784
ENSMUSG00000098202	lincRNA	B830012L14Rik	ENSMUST00000238801	lincRNA		12	1	109678088	3230
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000175886	protein_coding		6	-1	99096205	607
ENSMUSG00000098202	lincRNA	B830012L14Rik	ENSMUST00000238872	lincRNA		12	1	109694957	1823
ENSMUSG00000100586	protein_coding	Vmn1r90	ENSMUST00000227692	protein_coding	principal2	7	-1	14563506	7101
ENSMUSG00000100584	lincRNA	Gm28733	ENSMUST00000187597	lincRNA		Y	1	52940506	1498
ENSMUSG00000033542	protein_coding	Arhgef5	ENSMUST00000183313	retained_intron		6	1	43282614	2319
ENSMUSG00000087199	antisense	Gm15818	ENSMUST00000134692	antisense		1	1	9982387	656
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000089681	protein_coding		15	-1	75909335	2152
ENSMUSG00000107440	TEC	Gm40377	ENSMUST00000204604	TEC		6	1	73223050	2015
ENSMUSG00000100586	protein_coding	Vmn1r90	ENSMUST00000227788	protein_coding	principal2	7	-1	14563506	7018
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000177507	protein_coding		6	-1	99044442	456
ENSMUSG00000033542	protein_coding	Arhgef5	ENSMUST00000182647	retained_intron		6	1	43282882	573
ENSMUSG00000083937	processed_pseudogene	Cct3-ps1	ENSMUST00000118023	processed_pseudogene		4	1	52900599	1647
ENSMUSG00000100586	protein_coding	Vmn1r90	ENSMUST00000227566	protein_coding	alternative2	7	-1	14563506	6901
ENSMUSG00000031985	protein_coding	Gnpat	ENSMUST00000161986	protein_coding		8	1	124863072	1922
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000175670	protein_coding		6	-1	99027991	406
ENSMUSG00000100586	protein_coding	Vmn1r90	ENSMUST00000226510	protein_coding	alternative2	7	-1	14563506	6674
ENSMUSG00000107861	TEC	Gm44253	ENSMUST00000203387	TEC		6	1	43277755	628
ENSMUSG00000100584	lincRNA	Gm28733	ENSMUST00000187669	lincRNA		Y	1	52940959	621
ENSMUSG00000098202	lincRNA	B830012L14Rik	ENSMUST00000182785	lincRNA		12	1	109695586	4505
ENSMUSG00000100586	protein_coding	Vmn1r90	ENSMUST00000226981	processed_transcript		7	-1	14563506	1108
ENSMUSG00000100584	lincRNA	Gm28733	ENSMUST00000187471	lincRNA		Y	1	52940959	437
ENSMUSG00000099032	protein_coding	Tcf24	ENSMUST00000185184	protein_coding	principal1	1	-1	9967932	4193
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000177208	protein_coding		6	-1	99248336	341
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000134222	retained_intron		15	-1	75896740	793
ENSMUSG00000113277	processed_pseudogene	Gm18116	ENSMUST00000220920	processed_pseudogene		12	1	39765186	537
ENSMUSG00000100586	protein_coding	Vmn1r90	ENSMUST00000226264	protein_coding	principal2	7	-1	14563506	7796
ENSMUSG00000099032	protein_coding	Tcf24	ENSMUST00000097824	protein_coding		1	-1	9962809	2639
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000075832	processed_transcript		6	-1	99266515	791
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000023235	protein_coding		15	-1	75909329	824
ENSMUSG00000113761	transcribed_processed_pseudogene	Gm4263	ENSMUST00000220693	transcribed_processed_pseudogene		12	1	39874843	1101
ENSMUSG00000036526	protein_coding	Card11	ENSMUST00000199091	retained_intron		5	-1	141000471	1067
ENSMUSG00000104025	TEC	E330040D14Rik	ENSMUST00000192299	TEC		1	1	9967314	1374
ENSMUSG00000113761	transcribed_processed_pseudogene	Gm4263	ENSMUST00000221392	processed_transcript		12	1	39875450	667
ENSMUSG00000031985	protein_coding	Gnpat	ENSMUST00000162455	retained_intron		8	1	124883446	668
ENSMUSG00000063808	protein_coding	Gpatch1	ENSMUST00000131143	nonsense_mediated_decay		7	-1	35318440	2584
ENSMUSG00000114055	lincRNA	Gm32089	ENSMUST00000221222	lincRNA		13	-1	94295006	1193
ENSMUSG00000063808	protein_coding	Gpatch1	ENSMUST00000206758	retained_intron		7	-1	35285319	621
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000144614	protein_coding		15	-1	75909556	685
ENSMUSG00000114056	processed_pseudogene	Gm5668	ENSMUST00000220897	processed_pseudogene		13	-1	94299859	436
ENSMUSG00000031985	protein_coding	Gnpat	ENSMUST00000161628	retained_intron		8	1	124883515	908
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000141268	protein_coding		15	-1	75909319	713
ENSMUSG00000113494	lincRNA	Gm48102	ENSMUST00000220853	lincRNA		13	1	94294017	370
ENSMUSG00000031985	protein_coding	Gnpat	ENSMUST00000162192	retained_intron		8	1	124885497	664
ENSMUSG00000063808	protein_coding	Gpatch1	ENSMUST00000153778	retained_intron		7	-1	35318395	694
ENSMUSG00000031985	protein_coding	Gnpat	ENSMUST00000159864	retained_intron		8	1	124887629	538
ENSMUSG00000038602	protein_coding	Slc35f1	ENSMUST00000105473	protein_coding	principal1	10	1	52690533	4941
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000138754	retained_intron		6	-1	99266532	1464
ENSMUSG00000029522	protein_coding	Pla2g1b	ENSMUST00000145785	protein_coding		5	1	115466262	419
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000131967	retained_intron		6	-1	99266532	1351
ENSMUSG00000108704	TEC	Gm44636	ENSMUST00000206130	TEC		7	1	35282493	755
ENSMUSG00000035674	protein_coding	Ndufa3	ENSMUST00000076657	protein_coding	principal1	7	1	3617373	515
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000177227	protein_coding		6	-1	99521162	967
ENSMUSG00000112576	TEC	Gm47621	ENSMUST00000218808	TEC		10	1	52824305	2538
ENSMUSG00000029522	protein_coding	Pla2g1b	ENSMUST00000202822	processed_transcript		5	1	115466266	371
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000123712	protein_coding		15	-1	75909547	484
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000177235	processed_transcript		6	-1	99522647	392
ENSMUSG00000111918	TEC	Gm47624	ENSMUST00000220050	TEC		10	1	52693838	3836
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000176105	processed_transcript		6	-1	99436396	348
ENSMUSG00000014905	protein_coding	Dnajb9	ENSMUST00000015049	protein_coding	principal1	12	-1	44210326	2461
ENSMUSG00000112681	sense_intronic	Gm47622	ENSMUST00000218783	sense_intronic		10	1	53102543	693
ENSMUSG00000052102	protein_coding	Gnpda1	ENSMUST00000237487	protein_coding		18	-1	38338980	1929
ENSMUSG00000035674	protein_coding	Ndufa3	ENSMUST00000150497	retained_intron		7	1	3617380	782
ENSMUSG00000052102	protein_coding	Gnpda1	ENSMUST00000235590	protein_coding		18	-1	38338976	2085
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000129800	retained_intron		15	-1	75901255	440
ENSMUSG00000036860	protein_coding	Mrpl55	ENSMUST00000108786	protein_coding		11	1	59202486	757
ENSMUSG00000034057	protein_coding	Myrfl	ENSMUST00000048229	protein_coding	principal1	10	-1	116896919	3164
ENSMUSG00000035674	protein_coding	Ndufa3	ENSMUST00000156712	retained_intron		7	1	3617385	136
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000175838	processed_transcript		6	-1	99522721	420
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000055220	retained_intron		15	-1	75909319	2856
ENSMUSG00000035674	protein_coding	Ndufa3	ENSMUST00000108644	protein_coding		7	1	3617386	351
ENSMUSG00000014905	protein_coding	Dnajb9	ENSMUST00000220421	protein_coding		12	-1	44210068	383
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000141475	protein_coding		15	-1	75909547	789
ENSMUSG00000035674	protein_coding	Ndufa3	ENSMUST00000148403	nonsense_mediated_decay		7	1	3617391	343
ENSMUSG00000030067	protein_coding	Foxp1	ENSMUST00000113322	protein_coding		6	-1	99435345	7177
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000127550	protein_coding		15	-1	75905363	575
ENSMUSG00000086340	processed_transcript	1810059C17Rik	ENSMUST00000125173	processed_transcript		2	-1	18056613	487
ENSMUSG00000028813	protein_coding	CK137956	ENSMUST00000030614	protein_coding	principal1	4	-1	127970951	2319
ENSMUSG00000035674	protein_coding	Ndufa3	ENSMUST00000134683	nonsense_mediated_decay		7	1	3617617	476
ENSMUSG00000083070	processed_pseudogene	Gm13350	ENSMUST00000120519	processed_pseudogene		2	-1	18249843	479
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000145764	protein_coding		15	-1	75909291	350
ENSMUSG00000040297	protein_coding	Suco	ENSMUST00000048377	protein_coding	principal2	1	-1	161876682	6327
ENSMUSG00000095484	protein_coding	Olfr1480	ENSMUST00000207987	protein_coding	alternative2	19	1	13527913	1804
ENSMUSG00000055762	protein_coding	Eef1d	ENSMUST00000109975	protein_coding		15	-1	75909340	2842
ENSMUSG00000036860	protein_coding	Mrpl55	ENSMUST00000108787	protein_coding		11	1	59202489	718
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000001415	protein_coding	principal1	18	-1	36679366	2067
ENSMUSG00000040297	protein_coding	Suco	ENSMUST00000192422	retained_intron		1	-1	161822725	2323
ENSMUSG00000095484	protein_coding	Olfr1480	ENSMUST00000207904	protein_coding	principal2	19	1	13527924	1209
ENSMUSG00000081390	processed_pseudogene	Gm14538	ENSMUST00000122019	processed_pseudogene		X	1	20528256	1327
ENSMUSG00000040297	protein_coding	Suco	ENSMUST00000191841	retained_intron		1	-1	161829270	230
ENSMUSG00000095484	protein_coding	Olfr1480	ENSMUST00000207093	protein_coding	principal2	19	1	13527940	1819
ENSMUSG00000029522	protein_coding	Pla2g1b	ENSMUST00000031495	protein_coding	principal1	5	1	115466266	557
ENSMUSG00000040297	protein_coding	Suco	ENSMUST00000194388	processed_transcript		1	-1	161844793	119
ENSMUSG00000036775	protein_coding	Decr2	ENSMUST00000040907	protein_coding	principal1	17	-1	26090337	2224
ENSMUSG00000095484	protein_coding	Olfr1480	ENSMUST00000216709	processed_transcript		19	1	13528192	1876
ENSMUSG00000052102	protein_coding	Gnpda1	ENSMUST00000063814	protein_coding	principal1	18	-1	38339003	2289
ENSMUSG00000040297	protein_coding	Suco	ENSMUST00000194106	retained_intron		1	-1	161844353	398
ENSMUSG00000095484	protein_coding	Olfr1480	ENSMUST00000072219	protein_coding	principal2	19	1	13529675	948
ENSMUSG00000036775	protein_coding	Decr2	ENSMUST00000236614	retained_intron		17	-1	26084410	1849
ENSMUSG00000036775	protein_coding	Decr2	ENSMUST00000237265	protein_coding		17	-1	26090220	1993
ENSMUSG00000040297	protein_coding	Suco	ENSMUST00000192570	protein_coding	alternative2	1	-1	161853743	537
ENSMUSG00000036775	protein_coding	Decr2	ENSMUST00000236268	protein_coding		17	-1	26090275	2038
ENSMUSG00000032834	protein_coding	Pwp2	ENSMUST00000042556	protein_coding	principal1	10	-1	78185149	3872
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000224707	protein_coding		19	-1	4625333	1255
ENSMUSG00000040297	protein_coding	Suco	ENSMUST00000191975	protein_coding		1	-1	161857452	491
ENSMUSG00000052102	protein_coding	Gnpda1	ENSMUST00000153291	nonsense_mediated_decay		18	-1	38332070	550
ENSMUSG00000036860	protein_coding	Mrpl55	ENSMUST00000045697	protein_coding	principal1	11	1	59202492	940
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000225401	processed_transcript		14	-1	13961215	951
ENSMUSG00000052102	protein_coding	Gnpda1	ENSMUST00000129062	retained_intron		18	-1	38335078	303
ENSMUSG00000048230	protein_coding	Fbxo43	ENSMUST00000058643	protein_coding	principal1	15	-1	36164884	4035
ENSMUSG00000056310	protein_coding	Tyw1	ENSMUST00000100662	protein_coding		5	1	130257035	1867
ENSMUSG00000021693	protein_coding	Kif2a	ENSMUST00000022204	protein_coding	principal2	13	-1	107022118	5304
ENSMUSG00000036775	protein_coding	Decr2	ENSMUST00000150534	protein_coding		17	-1	26090300	1684
ENSMUSG00000030792	protein_coding	Dkkl1	ENSMUST00000033057	protein_coding	principal2	7	-1	45212123	1149
ENSMUSG00000083888	processed_pseudogene	Gm12441	ENSMUST00000121806	processed_pseudogene		3	-1	99101154	588
ENSMUSG00000052102	protein_coding	Gnpda1	ENSMUST00000139885	protein_coding		18	-1	38338909	430
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000223832	nonsense_mediated_decay		14	-1	13961260	1918
ENSMUSG00000036775	protein_coding	Decr2	ENSMUST00000123056	processed_transcript		17	-1	26083938	264
ENSMUSG00000052102	protein_coding	Gnpda1	ENSMUST00000237313	retained_intron		18	-1	38338937	2104
ENSMUSG00000051593	protein_coding	Olfr272	ENSMUST00000213989	protein_coding	principal1	4	-1	52919178	1973
ENSMUSG00000085254	processed_pseudogene	Gm15881	ENSMUST00000148792	processed_pseudogene		8	-1	58700787	942
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000224392	retained_intron		14	-1	13950296	424
ENSMUSG00000048230	protein_coding	Fbxo43	ENSMUST00000227793	protein_coding		15	-1	36164817	889
ENSMUSG00000051593	protein_coding	Olfr272	ENSMUST00000217085	processed_transcript		4	-1	52919178	1323
ENSMUSG00000030792	protein_coding	Dkkl1	ENSMUST00000210741	protein_coding	alternative2	7	-1	45211812	662
ENSMUSG00000029522	protein_coding	Pla2g1b	ENSMUST00000112071	protein_coding		5	1	115466272	361
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000224015	processed_transcript		14	-1	13961212	844
ENSMUSG00000109753	TEC	Gm45633	ENSMUST00000210669	TEC		8	1	57891743	3253
ENSMUSG00000048230	protein_coding	Fbxo43	ENSMUST00000227781	processed_transcript		15	-1	36164817	373
ENSMUSG00000030792	protein_coding	Dkkl1	ENSMUST00000209466	protein_coding		7	-1	45211823	748
ENSMUSG00000051593	protein_coding	Olfr272	ENSMUST00000107667	protein_coding	principal1	4	-1	52919172	1936
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000225325	protein_coding		14	-1	13961852	765
ENSMUSG00000036860	protein_coding	Mrpl55	ENSMUST00000108785	protein_coding	principal1	11	1	59202505	792
ENSMUSG00000029522	protein_coding	Pla2g1b	ENSMUST00000125568	protein_coding		5	1	115466272	387
ENSMUSG00000051593	protein_coding	Olfr272	ENSMUST00000051600	protein_coding	principal1	4	-1	52911794	962
ENSMUSG00000030792	protein_coding	Dkkl1	ENSMUST00000210454	retained_intron		7	-1	45212147	960
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000225559	nonsense_mediated_decay		14	-1	13954623	454
ENSMUSG00000004610	protein_coding	Etfb	ENSMUST00000004729	protein_coding	principal1	7	1	43444083	893
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000225202	processed_transcript		14	-1	13961212	741
ENSMUSG00000031985	protein_coding	Gnpat	ENSMUST00000034466	protein_coding	principal1	8	1	124863033	2984
ENSMUSG00000036860	protein_coding	Mrpl55	ENSMUST00000108784	protein_coding		11	1	59202538	729
ENSMUSG00000093661	protein_coding	Eif4e3	ENSMUST00000032151	protein_coding	principal1	6	-1	99666771	2515
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000225891	protein_coding		14	-1	13961206	512
ENSMUSG00000004610	protein_coding	Etfb	ENSMUST00000206286	protein_coding		7	1	43444119	562
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000224652	processed_transcript		14	-1	13957543	617
ENSMUSG00000103991	TEC	Gm38031	ENSMUST00000191819	TEC		1	1	104776114	3015
ENSMUSG00000105663	TEC	Gm43606	ENSMUST00000195938	TEC		5	-1	51858775	3556
ENSMUSG00000004610	protein_coding	Etfb	ENSMUST00000206196	protein_coding		7	1	43444130	551
ENSMUSG00000090118	processed_transcript	Gm16163	ENSMUST00000161868	processed_transcript		8	1	124831698	1119
ENSMUSG00000093559	sense_intronic	Gm20705	ENSMUST00000177278	sense_intronic		6	-1	99388499	1921
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000225590	nonsense_mediated_decay		14	-1	13961160	707
ENSMUSG00000089866	antisense	Gm15699	ENSMUST00000159213	antisense		1	-1	104912333	280
ENSMUSG00000106010	TEC	Gm42616	ENSMUST00000198989	TEC		5	-1	51879602	4184
ENSMUSG00000107583	TEC	Gm44104	ENSMUST00000204736	TEC		6	-1	99662218	3777
ENSMUSG00000004610	protein_coding	Etfb	ENSMUST00000206411	protein_coding		7	1	43444150	701
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000224764	retained_intron		14	-1	13955698	5264
ENSMUSG00000031984	protein_coding	2810004N23Rik	ENSMUST00000211971	processed_transcript		8	-1	124863014	2081
ENSMUSG00000104919	TEC	Gm42617	ENSMUST00000197640	TEC		5	-1	51893214	1229
ENSMUSG00000004610	protein_coding	Etfb	ENSMUST00000205363	protein_coding		7	1	43452890	343
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000225317	retained_intron		14	-1	13961234	706
ENSMUSG00000021693	protein_coding	Kif2a	ENSMUST00000122233	protein_coding		13	-1	107022114	3533
ENSMUSG00000004610	protein_coding	Etfb	ENSMUST00000143096	processed_transcript		7	1	43456501	409
ENSMUSG00000053453	protein_coding	Thoc7	ENSMUST00000226008	processed_transcript		14	-1	13957631	436
ENSMUSG00000105942	TEC	Gm43175	ENSMUST00000198450	TEC		5	-1	51910931	3810
ENSMUSG00000081721	processed_pseudogene	Gm13882	ENSMUST00000120886	processed_pseudogene		2	1	104291574	1002
ENSMUSG00000084083	processed_pseudogene	Gm15782	ENSMUST00000121073	processed_pseudogene		6	-1	149353826	445
ENSMUSG00000021693	protein_coding	Kif2a	ENSMUST00000159772	protein_coding	alternative1	13	-1	107022126	2570
ENSMUSG00000106292	TEC	Gm43174	ENSMUST00000195914	TEC		5	-1	52082332	2445
ENSMUSG00000004610	protein_coding	Etfb	ENSMUST00000155468	processed_transcript		7	1	43457036	415
ENSMUSG00000081126	processed_pseudogene	Gm15784	ENSMUST00000120260	processed_pseudogene		6	1	149361686	1462
ENSMUSG00000021693	protein_coding	Kif2a	ENSMUST00000117423	protein_coding		13	-1	106996756	2023
ENSMUSG00000086449	antisense	9030204H09Rik	ENSMUST00000139455	antisense		2	1	35819190	653
ENSMUSG00000041596	transcribed_unprocessed_pseudogene	Nlrp5-ps	ENSMUST00000044683	processed_transcript		7	-1	14622479	1913
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000225476	nonsense_mediated_decay		19	-1	4625641	1455
ENSMUSG00000021693	protein_coding	Kif2a	ENSMUST00000117539	protein_coding		13	-1	107022027	2568
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000237059	protein_coding		19	-1	4625370	1227
ENSMUSG00000081335	processed_pseudogene	Gm15786	ENSMUST00000121079	processed_pseudogene		6	1	149401793	450
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000236001	retained_intron		18	-1	36679316	2258
ENSMUSG00000041596	transcribed_unprocessed_pseudogene	Nlrp5-ps	ENSMUST00000173766	processed_transcript		7	-1	14609289	3105
ENSMUSG00000104847	lincRNA	Gm43177	ENSMUST00000197032	lincRNA		5	1	52117312	1107
ENSMUSG00000041596	transcribed_unprocessed_pseudogene	Nlrp5-ps	ENSMUST00000173220	transcribed_unprocessed_pseudogene		7	-1	14609339	1294
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000235552	retained_intron		18	-1	36675475	740
ENSMUSG00000021693	protein_coding	Kif2a	ENSMUST00000162845	processed_transcript		13	-1	106977118	531
ENSMUSG00000041596	transcribed_unprocessed_pseudogene	Nlrp5-ps	ENSMUST00000190796	processed_transcript		7	-1	14618555	555
ENSMUSG00000106648	TEC	Gm43176	ENSMUST00000199653	TEC		5	-1	52142573	2989
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000237073	retained_intron		18	-1	36676558	744
ENSMUSG00000087473	antisense	Gm13883	ENSMUST00000151310	antisense		2	1	104256672	1156
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000025823	protein_coding	principal1	19	-1	4625640	1425
ENSMUSG00000087473	antisense	Gm13883	ENSMUST00000150450	antisense		2	1	104256672	1404
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000235798	retained_intron		18	-1	36676430	799
ENSMUSG00000056310	protein_coding	Tyw1	ENSMUST00000040213	protein_coding	principal1	5	1	130257035	3044
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000237795	retained_intron		18	-1	36676486	567
ENSMUSG00000027559	protein_coding	Car3	ENSMUST00000195575	retained_intron		3	1	14863512	1395
ENSMUSG00000096914	protein_coding	Galntl6	ENSMUST00000204128	protein_coding	principal1	8	-1	58912640	5680
ENSMUSG00000021693	protein_coding	Kif2a	ENSMUST00000146395	protein_coding		13	-1	106993920	288
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000238072	protein_coding		18	-1	36676405	171
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000237022	protein_coding		19	-1	4625317	999
ENSMUSG00000056310	protein_coding	Tyw1	ENSMUST00000147619	protein_coding		5	1	130258930	771
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000238112	retained_intron		18	-1	36678569	913
ENSMUSG00000031984	protein_coding	2810004N23Rik	ENSMUST00000034465	protein_coding	principal1	8	-1	124863120	2340
ENSMUSG00000021692	protein_coding	Dimt1	ENSMUST00000223851	retained_intron		13	1	106947127	644
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000224675	protein_coding		19	-1	4625319	862
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000237965	nonsense_mediated_decay		18	-1	36679071	726
ENSMUSG00000102045	protein_coding	Gm21294	ENSMUST00000186443	protein_coding	principal1	Y	1	89052806	934
ENSMUSG00000056310	protein_coding	Tyw1	ENSMUST00000044204	protein_coding		5	1	130255619	4698
ENSMUSG00000024792	protein_coding	Zfpl1	ENSMUST00000025707	protein_coding	principal2	19	-1	6084943	1287
ENSMUSG00000031984	protein_coding	2810004N23Rik	ENSMUST00000212808	retained_intron		8	-1	124862965	3663
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000225264	protein_coding		19	-1	4625276	516
ENSMUSG00000035666	protein_coding	Gtf3c4	ENSMUST00000037117	protein_coding	principal1	2	-1	28840286	6941
ENSMUSG00000113345	processed_pseudogene	Gm48096	ENSMUST00000221005	processed_pseudogene		13	1	14559118	192
ENSMUSG00000111643	unprocessed_pseudogene	Gm48628	ENSMUST00000214379	unprocessed_pseudogene		2	-1	86471463	305
ENSMUSG00000024792	protein_coding	Zfpl1	ENSMUST00000237738	protein_coding	alternative2	19	-1	6084956	1357
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000237679	protein_coding		18	-1	36677142	189
ENSMUSG00000096914	protein_coding	Galntl6	ENSMUST00000204067	protein_coding		8	-1	57796590	1592
ENSMUSG00000100492	lincRNA	Gm28672	ENSMUST00000188727	lincRNA		Y	1	89222067	1490
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000225375	protein_coding		19	-1	4625603	692
ENSMUSG00000024792	protein_coding	Zfpl1	ENSMUST00000160131	retained_intron		19	-1	6082831	1080
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000237972	retained_intron		18	-1	36677140	246
ENSMUSG00000035666	protein_coding	Gtf3c4	ENSMUST00000156468	processed_transcript		2	-1	28840286	677
ENSMUSG00000100492	lincRNA	Gm28672	ENSMUST00000190816	lincRNA		Y	1	89222520	437
ENSMUSG00000117679	protein_coding	Apbb3	ENSMUST00000237354	retained_intron		18	-1	36678073	852
ENSMUSG00000024792	protein_coding	Zfpl1	ENSMUST00000160977	protein_coding		19	-1	6084915	922
ENSMUSG00000113627	processed_pseudogene	Gm32526	ENSMUST00000221878	processed_pseudogene		13	1	14594607	981
ENSMUSG00000020033	lincRNA	4930463O16Rik	ENSMUST00000020222	lincRNA		10	1	84488293	2088
ENSMUSG00000006335	protein_coding	Tfpt	ENSMUST00000155592	protein_coding	principal3	7	-1	3629884	1091
ENSMUSG00000096914	protein_coding	Galntl6	ENSMUST00000204937	processed_transcript		8	-1	57843058	567
ENSMUSG00000020033	lincRNA	4930463O16Rik	ENSMUST00000168525	lincRNA		10	1	84488734	495
ENSMUSG00000024792	protein_coding	Zfpl1	ENSMUST00000161548	protein_coding		19	-1	6084693	784
ENSMUSG00000111736	unprocessed_pseudogene	Olfr1070-ps1	ENSMUST00000215939	unprocessed_pseudogene		2	-1	86473722	388
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000236880	processed_transcript		19	-1	4625272	493
ENSMUSG00000100403	unprocessed_pseudogene	Gm21838	ENSMUST00000190955	unprocessed_pseudogene		Y	-1	89329468	696
ENSMUSG00000021692	protein_coding	Dimt1	ENSMUST00000224052	nonsense_mediated_decay		13	1	106947155	767
ENSMUSG00000111487	TEC	1700092E16Rik	ENSMUST00000214766	TEC		10	1	84498874	753
ENSMUSG00000111478	processed_pseudogene	Gm18251	ENSMUST00000214798	processed_pseudogene		10	-1	84502269	238
ENSMUSG00000035666	protein_coding	Gtf3c4	ENSMUST00000124390	processed_transcript		2	-1	28840352	646
ENSMUSG00000087145	lincRNA	Gm12665	ENSMUST00000126063	lincRNA		11	-1	24926058	541
ENSMUSG00000099982	lincRNA	Gm28670	ENSMUST00000185365	lincRNA		Y	1	89391528	1498
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000225285	retained_intron		19	-1	4625589	772
ENSMUSG00000087145	lincRNA	Gm12665	ENSMUST00000130092	lincRNA		11	-1	24926050	474
ENSMUSG00000111772	protein_coding	Olfr228	ENSMUST00000217292	protein_coding	principal1	2	-1	86487386	1854
ENSMUSG00000099982	lincRNA	Gm28670	ENSMUST00000188456	lincRNA		Y	1	89391981	437
ENSMUSG00000024792	protein_coding	Zfpl1	ENSMUST00000160444	retained_intron		19	-1	6084894	793
ENSMUSG00000024889	protein_coding	Rce1	ENSMUST00000225509	retained_intron		19	-1	4625291	770
ENSMUSG00000020441	protein_coding	2310033P09Rik	ENSMUST00000020719	protein_coding	principal1	11	1	59208321	1285
ENSMUSG00000100036	unprocessed_pseudogene	Gm28671	ENSMUST00000187036	unprocessed_pseudogene		Y	-1	89474348	692
ENSMUSG00000111772	protein_coding	Olfr228	ENSMUST00000216534	protein_coding	principal1	2	-1	86483740	942
ENSMUSG00000083934	processed_pseudogene	Gm12368	ENSMUST00000122251	processed_pseudogene		4	1	35401058	434
ENSMUSG00000070604	protein_coding	Vsig10l	ENSMUST00000107977	protein_coding	alternative2	7	1	43463151	3836
ENSMUSG00000006335	protein_coding	Tfpt	ENSMUST00000108641	protein_coding	alternative2	7	-1	3629929	1166
ENSMUSG00000111518	unprocessed_pseudogene	Olfr1073-ps1	ENSMUST00000215705	unprocessed_pseudogene		2	-1	86488404	478
ENSMUSG00000027559	protein_coding	Car3	ENSMUST00000029076	protein_coding	principal1	3	1	14863538	1679
ENSMUSG00000031993	protein_coding	Snx19	ENSMUST00000164099	protein_coding	principal1	9	1	30427108	5762
ENSMUSG00000024792	protein_coding	Zfpl1	ENSMUST00000160448	nonsense_mediated_decay		19	-1	6084904	600
ENSMUSG00000050840	protein_coding	Cdh20	ENSMUST00000062528	protein_coding	principal1	1	1	104768529	4012
ENSMUSG00000096914	protein_coding	Galntl6	ENSMUST00000077447	retained_intron		8	-1	58911627	912
ENSMUSG00000070604	protein_coding	Vsig10l	ENSMUST00000203769	protein_coding	principal2	7	1	43463233	2473
ENSMUSG00000101402	lincRNA	Gm28673	ENSMUST00000186562	lincRNA		Y	-1	89610894	1498
ENSMUSG00000006335	protein_coding	Tfpt	ENSMUST00000058880	nonsense_mediated_decay		7	-1	3629086	710
ENSMUSG00000024792	protein_coding	Zfpl1	ENSMUST00000160357	retained_intron		19	-1	6084307	698
ENSMUSG00000100070	lincRNA	Gm28994	ENSMUST00000188556	lincRNA		Y	-1	40764868	621
ENSMUSG00000035666	protein_coding	Gtf3c4	ENSMUST00000171404	protein_coding		2	-1	28840360	7127
ENSMUSG00000100070	lincRNA	Gm28994	ENSMUST00000190328	lincRNA		Y	-1	40764868	437
ENSMUSG00000096914	protein_coding	Galntl6	ENSMUST00000146513	nonsense_mediated_decay		8	-1	58911576	869
ENSMUSG00000101402	lincRNA	Gm28673	ENSMUST00000187708	lincRNA		Y	-1	89610441	437
ENSMUSG00000103060	TEC	Gm36969	ENSMUST00000194551	TEC		1	1	104906523	2809
ENSMUSG00000075027	antisense	4631405J19Rik	ENSMUST00000111270	antisense		2	1	93027956	2909
ENSMUSG00000027559	protein_coding	Car3	ENSMUST00000195834	retained_intron		3	1	14869178	804
ENSMUSG00000024792	protein_coding	Zfpl1	ENSMUST00000160712	protein_coding		19	-1	6084944	706
ENSMUSG00000070604	protein_coding	Vsig10l	ENSMUST00000205247	retained_intron		7	1	43464677	536
ENSMUSG00000083851	processed_pseudogene	Gm12365	ENSMUST00000117931	processed_pseudogene		4	1	35436214	568
ENSMUSG00000111514	lincRNA	E230014E18Rik	ENSMUST00000215920	lincRNA		10	1	84518045	859
ENSMUSG00000112376	lincRNA	Gm40649	ENSMUST00000219795	lincRNA		10	1	53181180	1457
ENSMUSG00000031993	protein_coding	Snx19	ENSMUST00000216552	retained_intron		9	1	30429245	4588
ENSMUSG00000022875	protein_coding	Kng1	ENSMUST00000125790	protein_coding		16	1	23057865	636
ENSMUSG00000024792	protein_coding	Zfpl1	ENSMUST00000159859	protein_coding		19	-1	6084927	550
ENSMUSG00000083351	processed_pseudogene	Gm15783	ENSMUST00000117521	processed_pseudogene		6	1	149405822	633
ENSMUSG00000112853	TEC	Gm47637	ENSMUST00000218912	TEC		10	-1	53204315	1294
ENSMUSG00000082547	unprocessed_pseudogene	Olfr1073-ps1	ENSMUST00000117635	unprocessed_pseudogene		2	-1	86488796	381
ENSMUSG00000006335	protein_coding	Tfpt	ENSMUST00000156194	processed_transcript		7	-1	3629579	562
ENSMUSG00000075027	antisense	4631405J19Rik	ENSMUST00000142330	antisense		2	1	93029349	822
ENSMUSG00000038446	protein_coding	Cdc40	ENSMUST00000044166	protein_coding	principal1	10	-1	40883311	3534
ENSMUSG00000096914	protein_coding	Galntl6	ENSMUST00000125865	processed_transcript		8	-1	58701070	886
ENSMUSG00000070604	protein_coding	Vsig10l	ENSMUST00000203152	processed_transcript		7	1	43465714	617
ENSMUSG00000031993	protein_coding	Snx19	ENSMUST00000216545	protein_coding		9	1	30435857	970
ENSMUSG00000096914	protein_coding	Galntl6	ENSMUST00000203398	protein_coding		8	-1	58911860	575
ENSMUSG00000100621	protein_coding	Gm28374	ENSMUST00000162374	protein_coding	principal1	19	-1	6082256	728
ENSMUSG00000110372	processed_pseudogene	Gm8096	ENSMUST00000209921	processed_pseudogene		8	-1	28084920	1591
ENSMUSG00000006335	protein_coding	Tfpt	ENSMUST00000205596	protein_coding		7	-1	3629827	315
ENSMUSG00000030108	protein_coding	Slc6a13	ENSMUST00000064580	protein_coding	principal1	6	1	121300227	2234
ENSMUSG00000075027	antisense	4631405J19Rik	ENSMUST00000145926	antisense		2	1	93030444	936
ENSMUSG00000110343	TEC	Gm45751	ENSMUST00000210185	TEC		8	-1	28084266	1573
ENSMUSG00000070604	protein_coding	Vsig10l	ENSMUST00000203042	nonsense_mediated_decay		7	1	43467615	755
ENSMUSG00000096914	protein_coding	Galntl6	ENSMUST00000188531	protein_coding		8	-1	58701044	1056
ENSMUSG00000006335	protein_coding	Tfpt	ENSMUST00000206370	nonsense_mediated_decay		7	-1	3629859	722
ENSMUSG00000075027	antisense	4631405J19Rik	ENSMUST00000099699	antisense		2	1	93029348	1225
ENSMUSG00000025371	protein_coding	Chmp6	ENSMUST00000026434	protein_coding	principal1	11	1	119913810	1557
ENSMUSG00000096914	protein_coding	Galntl6	ENSMUST00000098757	protein_coding		8	-1	57962564	2210
ENSMUSG00000109657	lincRNA	1700008N11Rik	ENSMUST00000209848	lincRNA		8	1	28084828	636
ENSMUSG00000109963	TEC	Gm45635	ENSMUST00000211516	TEC		8	1	58246587	2134
ENSMUSG00000110227	TEC	Gm45634	ENSMUST00000209736	TEC		8	-1	58604594	1990
ENSMUSG00000006335	protein_coding	Tfpt	ENSMUST00000153143	nonsense_mediated_decay		7	-1	3629579	389
ENSMUSG00000030108	protein_coding	Slc6a13	ENSMUST00000142144	retained_intron		6	1	121300289	638
ENSMUSG00000112835	lincRNA	Gm36173	ENSMUST00000219101	lincRNA		10	1	53235187	1163
ENSMUSG00000110487	processed_pseudogene	Gm18035	ENSMUST00000211962	processed_pseudogene		1	1	72692864	589
ENSMUSG00000030108	protein_coding	Slc6a13	ENSMUST00000142021	retained_intron		6	1	121300289	1254
ENSMUSG00000030108	protein_coding	Slc6a13	ENSMUST00000142419	protein_coding		6	1	121300782	681
ENSMUSG00000034660	protein_coding	Galp	ENSMUST00000037553	protein_coding	principal2	7	1	6197090	650
ENSMUSG00000049848	protein_coding	Ceacam19	ENSMUST00000052605	protein_coding	principal1	7	-1	19887965	3361
ENSMUSG00000021692	protein_coding	Dimt1	ENSMUST00000022203	protein_coding	principal1	13	1	106947159	2051
ENSMUSG00000034660	protein_coding	Galp	ENSMUST00000130076	protein_coding	alternative2	7	1	6202801	147
ENSMUSG00000108942	TEC	Gm44660	ENSMUST00000207134	TEC		7	1	19897334	2465
ENSMUSG00000025371	protein_coding	Chmp6	ENSMUST00000132197	protein_coding		11	1	119913441	543
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000114671	protein_coding		2	1	18064636	5063
ENSMUSG00000025371	protein_coding	Chmp6	ENSMUST00000124199	protein_coding		11	1	119913830	408
ENSMUSG00000049946	protein_coding	BC030500	ENSMUST00000062978	protein_coding	principal1	8	1	58911755	1605
ENSMUSG00000063011	protein_coding	Msln	ENSMUST00000075884	protein_coding	alternative2	17	-1	25754314	2114
ENSMUSG00000025371	protein_coding	Chmp6	ENSMUST00000148232	protein_coding		11	1	119914015	652
ENSMUSG00000068373	protein_coding	D430041D05Rik	ENSMUST00000136156	protein_coding	alternative2	2	-1	104410334	10127
ENSMUSG00000068373	protein_coding	D430041D05Rik	ENSMUST00000141159	protein_coding	alternative2	2	-1	104410334	9782
ENSMUSG00000095452	protein_coding	Gm20795	ENSMUST00000190909	protein_coding	principal1	Y	1	40804914	1344
ENSMUSG00000095452	protein_coding	Gm20795	ENSMUST00000178528	protein_coding	principal1	Y	1	40806531	699
ENSMUSG00000086439	lincRNA	Gm12069	ENSMUST00000145127	lincRNA		11	1	25301263	806
ENSMUSG00000068373	protein_coding	D430041D05Rik	ENSMUST00000230671	protein_coding	alternative2	2	-1	104411013	13015
ENSMUSG00000049946	protein_coding	BC030500	ENSMUST00000160055	protein_coding		8	1	58912257	615
ENSMUSG00000021692	protein_coding	Dimt1	ENSMUST00000223870	retained_intron		13	1	106947178	3338
ENSMUSG00000038446	protein_coding	Cdc40	ENSMUST00000216025	retained_intron		10	-1	40845937	2195
ENSMUSG00000090003	antisense	Gm15882	ENSMUST00000161344	antisense		8	1	58523294	855
ENSMUSG00000025371	protein_coding	Chmp6	ENSMUST00000139814	retained_intron		11	1	119915822	934
ENSMUSG00000022686	protein_coding	B3gnt5	ENSMUST00000121344	protein_coding	principal1	16	1	19760208	4175
ENSMUSG00000033015	lincRNA	4933427E13Rik	ENSMUST00000191131	lincRNA		11	1	25232626	429
ENSMUSG00000109791	TEC	Gm45636	ENSMUST00000210497	TEC		8	-1	58663492	1064
ENSMUSG00000025371	protein_coding	Chmp6	ENSMUST00000137055	retained_intron		11	1	119916731	356
ENSMUSG00000107482	protein_coding	Etfbl	ENSMUST00000203633	nonsense_mediated_decay	principal5	7	1	43444128	898
ENSMUSG00000068373	protein_coding	D430041D05Rik	ENSMUST00000155458	retained_intron		2	-1	104158419	2690
ENSMUSG00000115769	processed_pseudogene	Gm48938	ENSMUST00000226991	processed_pseudogene		14	1	50787816	424
ENSMUSG00000073997	protein_coding	Olfr521	ENSMUST00000220001	protein_coding	principal1	7	1	99763507	2254
ENSMUSG00000063011	protein_coding	Msln	ENSMUST00000238120	protein_coding	principal2	17	-1	25754377	2165
ENSMUSG00000038446	protein_coding	Cdc40	ENSMUST00000215625	retained_intron		10	-1	40883109	1523
ENSMUSG00000032998	protein_coding	Foxj3	ENSMUST00000176012	protein_coding		4	1	119537004	368
ENSMUSG00000073997	protein_coding	Olfr521	ENSMUST00000219663	protein_coding	principal1	7	1	99763508	2277
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000114680	protein_coding	principal1	2	1	18064687	3543
ENSMUSG00000038446	protein_coding	Cdc40	ENSMUST00000215051	retained_intron		10	-1	40883092	2925
ENSMUSG00000107482	protein_coding	Etfbl	ENSMUST00000204680	nonsense_mediated_decay	alternative2	7	1	43444131	819
ENSMUSG00000033015	lincRNA	4933427E13Rik	ENSMUST00000125234	lincRNA		11	1	25326107	1493
ENSMUSG00000073997	protein_coding	Olfr521	ENSMUST00000098263	protein_coding	principal1	7	1	99767164	967
ENSMUSG00000108618	TEC	Gm44816	ENSMUST00000206666	TEC		7	1	43448073	477
ENSMUSG00000038446	protein_coding	Cdc40	ENSMUST00000215441	retained_intron		10	-1	40883140	1643
ENSMUSG00000015093	protein_coding	Clic3	ENSMUST00000114265	protein_coding	principal2	2	1	25456838	808
ENSMUSG00000033015	lincRNA	4933427E13Rik	ENSMUST00000125309	lincRNA		11	1	25326136	724
ENSMUSG00000107410	processed_pseudogene	Gm44023	ENSMUST00000203710	processed_pseudogene		6	1	85529452	469
ENSMUSG00000033015	lincRNA	4933427E13Rik	ENSMUST00000044347	lincRNA		11	1	25329957	381
ENSMUSG00000063011	protein_coding	Msln	ENSMUST00000237359	protein_coding	principal2	17	-1	25754378	2044
ENSMUSG00000075028	protein_coding	Prdm11	ENSMUST00000238863	protein_coding		2	-1	93045571	3744
ENSMUSG00000106186	TEC	Gm43627	ENSMUST00000197119	TEC		5	1	64972650	2299
ENSMUSG00000063478	protein_coding	Tas2r114	ENSMUST00000080619	protein_coding	principal1	6	-1	131690063	930
ENSMUSG00000075028	protein_coding	Prdm11	ENSMUST00000111274	protein_coding		2	-1	93045571	4811
ENSMUSG00000063011	protein_coding	Msln	ENSMUST00000236137	protein_coding	alternative2	17	-1	25754377	2054
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000025711	protein_coding	principal1	19	-1	6077231	2675
ENSMUSG00000022686	protein_coding	B3gnt5	ENSMUST00000079780	protein_coding	principal1	16	1	19760234	4258
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000114669	protein_coding		2	1	18126156	3865
ENSMUSG00000063011	protein_coding	Msln	ENSMUST00000238188	nonsense_mediated_decay		17	-1	25749908	316
ENSMUSG00000107983	processed_pseudogene	Gm43973	ENSMUST00000203562	processed_pseudogene		6	1	131880668	210
ENSMUSG00000063011	protein_coding	Msln	ENSMUST00000237012	retained_intron		17	-1	25750333	288
ENSMUSG00000071470	protein_coding	Ccnb1ip1	ENSMUST00000095932	protein_coding	principal1	14	-1	50795728	1509
ENSMUSG00000068373	protein_coding	D430041D05Rik	ENSMUST00000156278	retained_intron		2	-1	104241183	2415
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000161634	retained_intron		19	-1	6069319	768
ENSMUSG00000022686	protein_coding	B3gnt5	ENSMUST00000152845	processed_transcript		16	1	19760399	698
ENSMUSG00000075028	protein_coding	Prdm11	ENSMUST00000111272	protein_coding	principal1	2	-1	93046053	3012
ENSMUSG00000015093	protein_coding	Clic3	ENSMUST00000140022	processed_transcript		2	1	25456838	724
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000160324	retained_intron		19	-1	6069150	621
ENSMUSG00000063011	protein_coding	Msln	ENSMUST00000235374	retained_intron		17	-1	25750720	590
ENSMUSG00000015093	protein_coding	Clic3	ENSMUST00000102918	protein_coding	alternative1	2	1	25456849	791
ENSMUSG00000022686	protein_coding	B3gnt5	ENSMUST00000131557	processed_transcript		16	1	19760586	444
ENSMUSG00000022686	protein_coding	B3gnt5	ENSMUST00000155780	processed_transcript		16	1	19760587	446
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000159475	protein_coding		19	-1	6069071	359
ENSMUSG00000068373	protein_coding	D430041D05Rik	ENSMUST00000149165	retained_intron		2	-1	104257984	4291
ENSMUSG00000071470	protein_coding	Ccnb1ip1	ENSMUST00000227614	protein_coding		14	-1	50807732	444
ENSMUSG00000043510	protein_coding	Hscb	ENSMUST00000056937	protein_coding	principal1	5	-1	110839777	804
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000114001	protein_coding		16	1	91729281	3898
ENSMUSG00000063011	protein_coding	Msln	ENSMUST00000235228	processed_transcript		17	-1	25751329	317
ENSMUSG00000015093	protein_coding	Clic3	ENSMUST00000143862	processed_transcript		2	1	25457636	362
ENSMUSG00000075028	protein_coding	Prdm11	ENSMUST00000130441	processed_transcript		2	-1	93013910	3167
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000154041	processed_transcript		2	1	18064684	825
ENSMUSG00000018500	protein_coding	Adora2b	ENSMUST00000018644	protein_coding	principal1	11	1	62248984	1845
ENSMUSG00000022686	protein_coding	B3gnt5	ENSMUST00000119468	protein_coding	principal1	16	1	19761054	2229
ENSMUSG00000053360	lincRNA	F730035P03Rik	ENSMUST00000065741	lincRNA		7	-1	99781539	917
ENSMUSG00000068373	protein_coding	D430041D05Rik	ENSMUST00000089726	protein_coding	principal2	2	-1	104410334	10124
ENSMUSG00000023070	protein_coding	Rgn	ENSMUST00000023832	protein_coding	principal1	X	1	20549787	1607
ENSMUSG00000048439	protein_coding	Nupl2	ENSMUST00000049887	protein_coding	principal1	5	1	24164963	2914
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000161222	retained_intron		19	-1	6069613	465
ENSMUSG00000015093	protein_coding	Clic3	ENSMUST00000142006	processed_transcript		2	1	25456891	918
ENSMUSG00000075028	protein_coding	Prdm11	ENSMUST00000147339	protein_coding		2	-1	93046167	681
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000159869	retained_intron		19	-1	6069698	514
ENSMUSG00000015093	protein_coding	Clic3	ENSMUST00000132311	processed_transcript		2	1	25456897	734
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000236983	retained_intron		19	-1	6069688	675
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000150422	processed_transcript		2	1	18064394	611
ENSMUSG00000022686	protein_coding	B3gnt5	ENSMUST00000164397	protein_coding	principal1	16	1	19760234	4872
ENSMUSG00000107774	lincRNA	Gm43974	ENSMUST00000205080	lincRNA		6	-1	131941619	684
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000153279	processed_transcript		2	1	18064834	651
ENSMUSG00000048439	protein_coding	Nupl2	ENSMUST00000115101	nonsense_mediated_decay		5	1	24165000	1624
ENSMUSG00000075028	protein_coding	Prdm11	ENSMUST00000178666	protein_coding		2	-1	93046144	1870
ENSMUSG00000084830	processed_pseudogene	Gm14539	ENSMUST00000117527	processed_pseudogene		X	-1	20581314	174
ENSMUSG00000063011	protein_coding	Msln	ENSMUST00000236053	retained_intron		17	-1	25754027	784
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000188641	protein_coding	principal1	1	-1	16656884	2014
ENSMUSG00000048439	protein_coding	Nupl2	ENSMUST00000147392	retained_intron		5	1	24167508	644
ENSMUSG00000037336	protein_coding	Mfsd2b	ENSMUST00000150764	retained_intron		12	-1	4874355	3486
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000148229	processed_transcript		2	1	18123709	500
ENSMUSG00000095987	processed_pseudogene	Gm13104	ENSMUST00000119651	processed_pseudogene		4	-1	144042478	1446
ENSMUSG00000112547	lincRNA	Gm47096	ENSMUST00000219127	lincRNA		12	-1	44269118	2086
ENSMUSG00000048439	protein_coding	Nupl2	ENSMUST00000124150	retained_intron		5	1	24177904	535
ENSMUSG00000110510	processed_pseudogene	Gm45908	ENSMUST00000212977	processed_pseudogene		1	-1	86378276	1177
ENSMUSG00000043510	protein_coding	Hscb	ENSMUST00000144850	nonsense_mediated_decay		5	-1	110836320	434
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000149786	processed_transcript		2	1	18170251	509
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000133649	processed_transcript		2	1	18064805	637
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000159211	retained_intron		19	-1	6077203	1826
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000115352	protein_coding	principal1	1	-1	16657042	960
ENSMUSG00000043510	protein_coding	Hscb	ENSMUST00000145318	protein_coding		5	-1	110839575	452
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000155352	processed_transcript		2	1	18064841	245
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000160519	retained_intron		19	-1	6076868	786
ENSMUSG00000046844	protein_coding	Vat1l	ENSMUST00000142591	processed_transcript		8	1	114205612	456
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000160233	nonsense_mediated_decay		19	-1	6077198	399
ENSMUSG00000043510	protein_coding	Hscb	ENSMUST00000122921	retained_intron		5	-1	110834895	420
ENSMUSG00000026743	protein_coding	Mllt10	ENSMUST00000028076	protein_coding	principal1	2	1	18055237	4917
ENSMUSG00000026237	protein_coding	Nmur1	ENSMUST00000212541	protein_coding		1	-1	86426228	1534
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000186948	protein_coding	principal1	1	-1	16657018	641
ENSMUSG00000082520	processed_pseudogene	Gm13349	ENSMUST00000118436	processed_pseudogene		2	-1	18338989	411
ENSMUSG00000024797	protein_coding	Vps51	ENSMUST00000160590	protein_coding		19	-1	6077200	840
ENSMUSG00000081619	processed_pseudogene	Gm13351	ENSMUST00000118087	processed_pseudogene		2	-1	18179442	414
ENSMUSG00000026237	protein_coding	Nmur1	ENSMUST00000212058	protein_coding	principal2	1	-1	86389344	1287
ENSMUSG00000052738	protein_coding	Suclg1	ENSMUST00000064740	protein_coding	principal1	6	1	73248382	1519
ENSMUSG00000035239	protein_coding	Neu3	ENSMUST00000036331	protein_coding	principal1	7	-1	99828417	3341
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000187910	protein_coding		1	-1	16657038	620
ENSMUSG00000026237	protein_coding	Nmur1	ENSMUST00000212614	protein_coding		1	-1	86398190	519
ENSMUSG00000108245	processed_pseudogene	Prb3-ps	ENSMUST00000204675	processed_pseudogene		6	-1	132056513	1111
ENSMUSG00000047733	protein_coding	Tmem262	ENSMUST00000149347	protein_coding		19	1	6080033	442
ENSMUSG00000108144	processed_pseudogene	Gm43975	ENSMUST00000203023	processed_pseudogene		6	-1	132069785	481
ENSMUSG00000026237	protein_coding	Nmur1	ENSMUST00000027440	protein_coding	alternative2	1	-1	86388141	1218
ENSMUSG00000041426	protein_coding	Hibch	ENSMUST00000186922	retained_intron		1	1	52844929	3765
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000185771	protein_coding	principal1	1	-1	16656914	742
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000148401	protein_coding		2	-1	18219557	456
ENSMUSG00000047733	protein_coding	Tmem262	ENSMUST00000143303	protein_coding	principal1	19	1	6080033	545
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000185393	protein_coding		1	-1	16648039	366
ENSMUSG00000079276	unprocessed_pseudogene	Gm4736	ENSMUST00000100870	unprocessed_pseudogene		6	-1	132117662	380
ENSMUSG00000015672	protein_coding	Mrpl32	ENSMUST00000220621	protein_coding	principal1	13	-1	14613165	3013
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000186701	protein_coding		1	-1	16656625	534
ENSMUSG00000083241	processed_pseudogene	Gm13259	ENSMUST00000120792	processed_pseudogene		4	-1	133281312	456
ENSMUSG00000107671	processed_pseudogene	Gm43976	ENSMUST00000203637	processed_pseudogene		6	-1	132135689	235
ENSMUSG00000015672	protein_coding	Mrpl32	ENSMUST00000221699	nonsense_mediated_decay		13	-1	14613025	1174
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000188987	retained_intron		1	-1	16656900	350
ENSMUSG00000107973	processed_pseudogene	Gm43978	ENSMUST00000203491	processed_pseudogene		6	-1	132140615	451
ENSMUSG00000015672	protein_coding	Mrpl32	ENSMUST00000223530	retained_intron		13	-1	14613027	2903
ENSMUSG00000029185	protein_coding	Fam114a1	ENSMUST00000031080	protein_coding	principal1	5	1	64970071	2938
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000186541	retained_intron		1	-1	16656915	410
ENSMUSG00000092577	processed_pseudogene	Gm7393	ENSMUST00000172650	processed_pseudogene		17	1	14941965	739
ENSMUSG00000015672	protein_coding	Mrpl32	ENSMUST00000015816	nonsense_mediated_decay		13	-1	14613015	658
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000190986	retained_intron		1	-1	16656878	384
ENSMUSG00000079658	protein_coding	Eloc	ENSMUST00000191535	retained_intron		1	-1	16657042	323
ENSMUSG00000052738	protein_coding	Suclg1	ENSMUST00000123159	nonsense_mediated_decay		6	1	73248652	670
ENSMUSG00000026885	protein_coding	Ttll11	ENSMUST00000028248	protein_coding	principal2	2	-1	35979624	3176
ENSMUSG00000029185	protein_coding	Fam114a1	ENSMUST00000139366	protein_coding		5	1	64972425	576
ENSMUSG00000100574	lincRNA	Gm28674	ENSMUST00000187502	lincRNA		Y	-1	89639438	1493
ENSMUSG00000100574	lincRNA	Gm28674	ENSMUST00000191175	lincRNA		Y	-1	89638985	430
ENSMUSG00000026885	protein_coding	Ttll11	ENSMUST00000161970	nonsense_mediated_decay		2	-1	35979766	2654
ENSMUSG00000052738	protein_coding	Suclg1	ENSMUST00000203632	protein_coding		6	1	73248660	534
ENSMUSG00000100330	unprocessed_pseudogene	Gm28531	ENSMUST00000190529	unprocessed_pseudogene		Y	1	89656606	696
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000114261	protein_coding	principal1	2	-1	25461094	981
ENSMUSG00000026885	protein_coding	Ttll11	ENSMUST00000160906	protein_coding		2	-1	35940806	1820
ENSMUSG00000046844	protein_coding	Vat1l	ENSMUST00000049509	protein_coding	principal1	8	1	114205630	3666
ENSMUSG00000093773	unprocessed_pseudogene	Obox3-ps7	ENSMUST00000176465	unprocessed_pseudogene		7	1	14634039	410
ENSMUSG00000052738	protein_coding	Suclg1	ENSMUST00000173366	processed_transcript		6	1	73248661	630
ENSMUSG00000099891	processed_pseudogene	Gm5575	ENSMUST00000190879	processed_pseudogene		5	-1	24209724	398
ENSMUSG00000026885	protein_coding	Ttll11	ENSMUST00000160939	processed_transcript		2	-1	35882002	458
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000198199	protein_coding	principal3	13	1	83504034	2589
ENSMUSG00000105141	processed_pseudogene	Gm43828	ENSMUST00000196890	processed_pseudogene		5	1	24232409	639
ENSMUSG00000046844	protein_coding	Vat1l	ENSMUST00000150963	protein_coding		8	1	114205634	465
ENSMUSG00000026885	protein_coding	Ttll11	ENSMUST00000160284	processed_transcript		2	-1	35944947	852
ENSMUSG00000037913	protein_coding	Tmem156	ENSMUST00000203664	processed_transcript		5	-1	65091629	1012
ENSMUSG00000046844	protein_coding	Vat1l	ENSMUST00000124143	retained_intron		8	1	114368116	4244
ENSMUSG00000026885	protein_coding	Ttll11	ENSMUST00000127742	processed_transcript		2	-1	35979913	1768
ENSMUSG00000052738	protein_coding	Suclg1	ENSMUST00000127660	retained_intron		6	1	73248668	2767
ENSMUSG00000107874	protein_coding	Prpmp5	ENSMUST00000048686	protein_coding	principal1	6	-1	132314757	1298
ENSMUSG00000084848	antisense	4933408N05Rik	ENSMUST00000139864	antisense		8	-1	114351479	1584
ENSMUSG00000052738	protein_coding	Suclg1	ENSMUST00000173409	retained_intron		6	1	73260360	485
ENSMUSG00000116980	processed_pseudogene	Gm49597	ENSMUST00000232498	processed_pseudogene		16	-1	19852767	313
ENSMUSG00000037465	protein_coding	Klf10	ENSMUST00000227920	protein_coding		15	-1	38300706	2144
ENSMUSG00000107834	processed_pseudogene	Gm43979	ENSMUST00000203179	processed_pseudogene		6	-1	132233996	475
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000113999	protein_coding		16	1	91729353	5393
ENSMUSG00000107777	processed_pseudogene	Gm44687	ENSMUST00000204975	processed_pseudogene		6	-1	132229073	235
ENSMUSG00000026885	protein_coding	Ttll11	ENSMUST00000140201	protein_coding		2	-1	35950591	839
ENSMUSG00000019132	protein_coding	BC005537	ENSMUST00000019276	protein_coding	principal1	13	1	24801657	5849
ENSMUSG00000026885	protein_coding	Ttll11	ENSMUST00000162172	protein_coding		2	-1	35952414	838
ENSMUSG00000026885	protein_coding	Ttll11	ENSMUST00000112976	protein_coding	alternative2	2	-1	35979624	3077
ENSMUSG00000019132	protein_coding	BC005537	ENSMUST00000155575	protein_coding		13	1	24802020	600
ENSMUSG00000031059	protein_coding	Ndufb11	ENSMUST00000116621	protein_coding	principal1	X	-1	20617619	908
ENSMUSG00000037913	protein_coding	Tmem156	ENSMUST00000043352	protein_coding	alternative2	5	-1	65091584	1565
ENSMUSG00000107106	TEC	Gm43760	ENSMUST00000202120	TEC		2	-1	35765879	3015
ENSMUSG00000037913	protein_coding	Tmem156	ENSMUST00000212640	protein_coding		5	-1	65092132	1271
ENSMUSG00000037913	protein_coding	Tmem156	ENSMUST00000212080	protein_coding	principal5	5	-1	65091684	1411
ENSMUSG00000106994	TEC	Gm10829	ENSMUST00000202084	TEC		2	1	35844195	2988
ENSMUSG00000037913	protein_coding	Tmem156	ENSMUST00000212194	protein_coding	alternative2	5	-1	65092105	956
ENSMUSG00000037465	protein_coding	Klf10	ENSMUST00000074043	protein_coding	principal1	15	-1	38300706	3044
ENSMUSG00000067543	protein_coding	Prb1	ENSMUST00000087853	protein_coding	principal1	6	-1	132210521	1621
ENSMUSG00000037913	protein_coding	Tmem156	ENSMUST00000203117	retained_intron		5	-1	65091625	911
ENSMUSG00000008874	protein_coding	Clec3a	ENSMUST00000009018	protein_coding	principal1	8	1	114418086	591
ENSMUSG00000037465	protein_coding	Klf10	ENSMUST00000226363	protein_coding		15	-1	38299082	2917
ENSMUSG00000037465	protein_coding	Klf10	ENSMUST00000228732	protein_coding		15	-1	38298839	536
ENSMUSG00000039886	protein_coding	Tmem120a	ENSMUST00000043378	protein_coding	principal1	5	-1	135744448	1559
ENSMUSG00000037465	protein_coding	Klf10	ENSMUST00000228772	protein_coding		15	-1	38299795	530
ENSMUSG00000107075	TEC	Gm43068	ENSMUST00000201095	TEC		5	1	120746036	1273
ENSMUSG00000037465	protein_coding	Klf10	ENSMUST00000228416	protein_coding		15	-1	38300706	326
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000014499	protein_coding	principal1	2	-1	128687391	8942
ENSMUSG00000059060	protein_coding	Rad51b	ENSMUST00000171210	protein_coding	principal1	12	1	79297282	1858
ENSMUSG00000039886	protein_coding	Tmem120a	ENSMUST00000141779	retained_intron		5	-1	135736590	679
ENSMUSG00000039886	protein_coding	Tmem120a	ENSMUST00000199952	processed_transcript		5	-1	135737236	480
ENSMUSG00000046991	protein_coding	Wdr27	ENSMUST00000232147	nonsense_mediated_decay		17	-1	14934659	3147
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000134485	processed_transcript		2	-1	128687375	3007
ENSMUSG00000041426	protein_coding	Hibch	ENSMUST00000159352	protein_coding		1	1	52845013	1704
ENSMUSG00000059060	protein_coding	Rad51b	ENSMUST00000079533	protein_coding		12	1	79297351	1759
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000110332	protein_coding		2	-1	128687354	1214
ENSMUSG00000039886	protein_coding	Tmem120a	ENSMUST00000127156	retained_intron		5	-1	135742399	785
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000123503	processed_transcript		2	-1	128663177	3261
ENSMUSG00000039886	protein_coding	Tmem120a	ENSMUST00000153399	protein_coding		5	-1	135744208	358
ENSMUSG00000046991	protein_coding	Wdr27	ENSMUST00000228330	protein_coding		17	-1	14943124	2759
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000110333	protein_coding		2	-1	128687376	4214
ENSMUSG00000059060	protein_coding	Rad51b	ENSMUST00000218039	protein_coding	principal1	12	1	79297563	2187
ENSMUSG00000059060	protein_coding	Rad51b	ENSMUST00000221257	processed_transcript		12	1	79327353	375
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000143007	processed_transcript		2	-1	128664020	627
ENSMUSG00000046991	protein_coding	Wdr27	ENSMUST00000228233	protein_coding		17	-1	14909519	1048
ENSMUSG00000046991	protein_coding	Wdr27	ENSMUST00000238668	protein_coding	principal1	17	-1	14943120	2708
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000154320	processed_transcript		2	-1	128630035	667
ENSMUSG00000041426	protein_coding	Hibch	ENSMUST00000161125	retained_intron		1	1	52845044	736
ENSMUSG00000048076	protein_coding	Arf1	ENSMUST00000061242	protein_coding	principal1	11	-1	59228270	1800
ENSMUSG00000046991	protein_coding	Wdr27	ENSMUST00000228869	processed_transcript		17	-1	14943158	1800
ENSMUSG00000046991	protein_coding	Wdr27	ENSMUST00000228221	processed_transcript		17	-1	14943077	413
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000145906	processed_transcript		2	-1	128627461	742
ENSMUSG00000046991	protein_coding	Wdr27	ENSMUST00000227673	processed_transcript		17	-1	14943086	535
ENSMUSG00000046991	protein_coding	Wdr27	ENSMUST00000170386	protein_coding		17	-1	14934653	2574
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000154995	processed_transcript		2	-1	128628639	564
ENSMUSG00000037101	protein_coding	Ttc29	ENSMUST00000117845	protein_coding		8	1	78213297	650
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000151171	processed_transcript		2	-1	128622845	836
ENSMUSG00000048076	protein_coding	Arf1	ENSMUST00000163300	protein_coding	principal1	11	-1	59228162	1991
ENSMUSG00000014355	protein_coding	Anapc1	ENSMUST00000124418	processed_transcript		2	-1	128618142	691
ENSMUSG00000114155	processed_pseudogene	Gm7986	ENSMUST00000221336	processed_pseudogene		12	-1	72049259	551
ENSMUSG00000041426	protein_coding	Hibch	ENSMUST00000044478	protein_coding	principal1	1	1	52845046	1830
ENSMUSG00000014243	protein_coding	Zswim7	ENSMUST00000072916	protein_coding	principal1	11	-1	62281375	732
ENSMUSG00000037101	protein_coding	Ttc29	ENSMUST00000126172	protein_coding		8	1	78213302	543
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000091418	protein_coding	principal1	2	-1	18392811	5070
ENSMUSG00000037101	protein_coding	Ttc29	ENSMUST00000137424	processed_transcript		8	1	78213315	427
ENSMUSG00000041426	protein_coding	Hibch	ENSMUST00000161552	processed_transcript		1	1	52851768	293
ENSMUSG00000049470	protein_coding	Aff4	ENSMUST00000060945	protein_coding	principal1	11	1	53350833	10099
ENSMUSG00000043398	protein_coding	Gpr135	ENSMUST00000050649	protein_coding	principal1	12	-1	72071125	3150
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000133919	processed_transcript		2	-1	25460952	1254
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000172210	processed_transcript		2	-1	18216902	720
ENSMUSG00000041426	protein_coding	Hibch	ENSMUST00000159431	processed_transcript		1	1	52865089	405
ENSMUSG00000032999	protein_coding	Nlrp4f	ENSMUST00000222514	nonsense_mediated_decay		13	-1	65205943	3520
ENSMUSG00000049470	protein_coding	Aff4	ENSMUST00000153821	protein_coding		11	1	53368073	464
ENSMUSG00000073724	protein_coding	Pramel4	ENSMUST00000091676	protein_coding	principal2	4	1	144059126	2399
ENSMUSG00000049470	protein_coding	Aff4	ENSMUST00000139054	retained_intron		11	1	53368630	3818
ENSMUSG00000041426	protein_coding	Hibch	ENSMUST00000162609	retained_intron		1	1	52902633	472
ENSMUSG00000089802	processed_pseudogene	Gm16107	ENSMUST00000162523	processed_pseudogene		1	-1	52873998	862
ENSMUSG00000048806	protein_coding	Ifnb1	ENSMUST00000055671	protein_coding	principal1	4	-1	88522774	750
ENSMUSG00000049470	protein_coding	Aff4	ENSMUST00000136470	retained_intron		11	1	53372580	600
ENSMUSG00000049470	protein_coding	Aff4	ENSMUST00000152616	protein_coding		11	1	53372966	476
ENSMUSG00000023707	protein_coding	Ogfod2	ENSMUST00000024470	protein_coding	principal1	5	1	124112297	1596
ENSMUSG00000037101	protein_coding	Ttc29	ENSMUST00000049395	protein_coding	principal1	8	1	78213342	2450
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000135915	processed_transcript		2	-1	25461072	896
ENSMUSG00000073724	protein_coding	Pramel4	ENSMUST00000156324	nonsense_mediated_decay		4	1	144059126	2263
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000166495	protein_coding	principal1	2	-1	18392830	5497
ENSMUSG00000049470	protein_coding	Aff4	ENSMUST00000130152	processed_transcript		11	1	53372974	429
ENSMUSG00000037101	protein_coding	Ttc29	ENSMUST00000156432	processed_transcript		8	1	78213350	456
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000151239	protein_coding		2	-1	25461031	592
ENSMUSG00000073724	protein_coding	Pramel4	ENSMUST00000133626	protein_coding		4	1	144059139	636
ENSMUSG00000037101	protein_coding	Ttc29	ENSMUST00000143157	retained_intron		8	1	78251491	505
ENSMUSG00000049470	protein_coding	Aff4	ENSMUST00000154499	retained_intron		11	1	53404547	687
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000138079	processed_transcript		2	-1	25461023	765
ENSMUSG00000037101	protein_coding	Ttc29	ENSMUST00000124713	processed_transcript		8	1	78390982	673
ENSMUSG00000037101	protein_coding	Ttc29	ENSMUST00000109902	protein_coding	principal1	8	1	78218794	1416
ENSMUSG00000073724	protein_coding	Pramel4	ENSMUST00000084191	protein_coding	alternative2	4	1	144065698	2292
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000125710	processed_transcript		2	-1	25461008	917
ENSMUSG00000039342	protein_coding	Ankar	ENSMUST00000212573	protein_coding	alternative2	1	-1	72700579	3952
ENSMUSG00000073724	protein_coding	Pramel4	ENSMUST00000094520	protein_coding	principal2	4	1	144065732	2297
ENSMUSG00000032999	protein_coding	Nlrp4f	ENSMUST00000221659	protein_coding	principal1	13	-1	65205968	3551
ENSMUSG00000023707	protein_coding	Ogfod2	ENSMUST00000130140	retained_intron		5	1	124112321	1838
ENSMUSG00000049470	protein_coding	Aff4	ENSMUST00000129019	retained_intron		11	1	53410694	933
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000128560	processed_transcript		2	-1	25460927	521
ENSMUSG00000098056	processed_pseudogene	Gm8100	ENSMUST00000182906	processed_pseudogene		8	1	28185840	988
ENSMUSG00000109794	lincRNA	Gm45571	ENSMUST00000209671	lincRNA		8	-1	28529717	569
ENSMUSG00000110322	lincRNA	Gm8110	ENSMUST00000209987	lincRNA		8	1	28520676	1884
ENSMUSG00000110322	lincRNA	Gm8110	ENSMUST00000211297	lincRNA		8	1	28520676	1782
ENSMUSG00000087559	lincRNA	Gm13802	ENSMUST00000150159	lincRNA		2	-1	93098244	663
ENSMUSG00000032999	protein_coding	Nlrp4f	ENSMUST00000221280	protein_coding		13	-1	65181631	579
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000130130	processed_transcript		2	-1	25460664	744
ENSMUSG00000032999	protein_coding	Nlrp4f	ENSMUST00000220448	protein_coding		13	-1	65190265	675
ENSMUSG00000009900	protein_coding	Wnt3a	ENSMUST00000010044	protein_coding	principal1	11	-1	59290752	2761
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000199450	protein_coding		13	1	83504206	2862
ENSMUSG00000023707	protein_coding	Ogfod2	ENSMUST00000119269	protein_coding		5	1	124112321	1474
ENSMUSG00000037336	protein_coding	Mfsd2b	ENSMUST00000085790	nonsense_mediated_decay		12	-1	4874358	2868
ENSMUSG00000082374	processed_pseudogene	Gm12741	ENSMUST00000118836	processed_pseudogene		4	1	108731742	556
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000124172	processed_transcript		2	-1	25460965	1245
ENSMUSG00000097776	lincRNA	Gm26795	ENSMUST00000180993	lincRNA		8	1	28593505	1952
ENSMUSG00000097776	lincRNA	Gm26795	ENSMUST00000181267	lincRNA		8	1	28593532	654
ENSMUSG00000023707	protein_coding	Ogfod2	ENSMUST00000196627	protein_coding		5	1	124112325	532
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000163130	nonsense_mediated_decay		2	-1	18392420	1490
ENSMUSG00000032690	protein_coding	Oas2	ENSMUST00000053909	protein_coding	principal3	5	-1	120749853	3869
ENSMUSG00000032999	protein_coding	Nlrp4f	ENSMUST00000222559	protein_coding		13	-1	65205965	839
ENSMUSG00000036574	protein_coding	Tex44	ENSMUST00000046004	protein_coding	principal1	1	1	86426329	1724
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000028072	nonsense_mediated_decay		2	-1	18392642	1876
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000198916	protein_coding		13	1	83504240	363
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000132561	processed_transcript		2	-1	25460317	610
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000200123	protein_coding		13	1	83504240	332
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000168723	protein_coding		2	-1	18392421	1175
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000132596	processed_transcript		2	-1	25460200	608
ENSMUSG00000032999	protein_coding	Nlrp4f	ENSMUST00000223418	protein_coding		13	-1	65205943	689
ENSMUSG00000032690	protein_coding	Oas2	ENSMUST00000081491	protein_coding	alternative2	5	-1	120749853	3961
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000123986	processed_transcript		2	-1	25460948	532
ENSMUSG00000080964	unprocessed_pseudogene	Ifna-ps1	ENSMUST00000119856	unprocessed_pseudogene		4	-1	88580574	555
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000164835	nonsense_mediated_decay		2	-1	18307016	746
ENSMUSG00000023707	protein_coding	Ogfod2	ENSMUST00000131094	retained_intron		5	1	124112340	708
ENSMUSG00000032999	protein_coding	Nlrp4f	ENSMUST00000222273	protein_coding		13	-1	65205977	458
ENSMUSG00000096011	protein_coding	Ifna15	ENSMUST00000102809	protein_coding	principal1	4	-1	88558245	573
ENSMUSG00000037336	protein_coding	Mfsd2b	ENSMUST00000125344	retained_intron		12	-1	4874345	3173
ENSMUSG00000047617	protein_coding	Paxx	ENSMUST00000141613	processed_transcript		2	-1	25460279	554
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000164606	retained_intron		2	-1	18310258	2850
ENSMUSG00000023707	protein_coding	Ogfod2	ENSMUST00000199457	protein_coding		5	1	124112340	454
ENSMUSG00000039342	protein_coding	Ankar	ENSMUST00000211837	protein_coding	alternative2	1	-1	72700539	4543
ENSMUSG00000095896	protein_coding	Ifna14	ENSMUST00000102808	protein_coding	principal1	4	-1	88571798	570
ENSMUSG00000032690	protein_coding	Oas2	ENSMUST00000147941	retained_intron		5	-1	120735575	2373
ENSMUSG00000032999	protein_coding	Nlrp4f	ENSMUST00000037372	protein_coding	principal1	13	-1	65205716	3527
ENSMUSG00000095270	protein_coding	Ifna9	ENSMUST00000102807	protein_coding	principal1	4	-1	88592385	573
ENSMUSG00000032690	protein_coding	Oas2	ENSMUST00000146101	protein_coding		5	-1	120738408	827
ENSMUSG00000023707	protein_coding	Ogfod2	ENSMUST00000198505	protein_coding		5	1	124112357	600
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000153055	processed_transcript		2	-1	18392824	1001
ENSMUSG00000026806	protein_coding	Ddx31	ENSMUST00000147779	processed_transcript		2	1	28840406	903
ENSMUSG00000026740	protein_coding	Dnajc1	ENSMUST00000165793	retained_intron		2	-1	18392830	749
ENSMUSG00000112686	processed_pseudogene	Gm7034	ENSMUST00000218638	processed_pseudogene		10	1	74820722	645
ENSMUSG00000023707	protein_coding	Ogfod2	ENSMUST00000198770	nonsense_mediated_decay		5	1	124112431	818
ENSMUSG00000039342	protein_coding	Ankar	ENSMUST00000053499	protein_coding	principal3	1	-1	72700564	4571
ENSMUSG00000101205	processed_pseudogene	Gm29308	ENSMUST00000188863	processed_pseudogene		Y	-1	77443514	315
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000159084	protein_coding		19	-1	6067803	1351
ENSMUSG00000023707	protein_coding	Ogfod2	ENSMUST00000148365	retained_intron		5	1	124112815	770
ENSMUSG00000023707	protein_coding	Ogfod2	ENSMUST00000136955	retained_intron		5	1	124113303	878
ENSMUSG00000039342	protein_coding	Ankar	ENSMUST00000212710	protein_coding		1	-1	72700564	559
ENSMUSG00000100526	lincRNA	Gm29309	ENSMUST00000186251	lincRNA		Y	-1	77448266	2166
ENSMUSG00000110999	unprocessed_pseudogene	Olfr1075-ps1	ENSMUST00000214201	unprocessed_pseudogene		2	1	86497406	470
ENSMUSG00000058064	processed_pseudogene	Gm10036	ENSMUST00000079733	processed_pseudogene		18	1	15832794	534
ENSMUSG00000111105	unprocessed_pseudogene	Gm5023	ENSMUST00000217442	unprocessed_pseudogene		2	1	86503661	587
ENSMUSG00000101785	lincRNA	Gm28702	ENSMUST00000188276	lincRNA		Y	-1	77481943	253
ENSMUSG00000036257	protein_coding	Pnpla8	ENSMUST00000122902	protein_coding	alternative2	12	1	44221370	2728
ENSMUSG00000081823	unprocessed_pseudogene	Cyp4a28-ps	ENSMUST00000121884	unprocessed_pseudogene		4	-1	115156506	1477
ENSMUSG00000100149	lincRNA	Gm28701	ENSMUST00000189778	lincRNA		Y	1	77478913	1010
ENSMUSG00000072407	processed_pseudogene	Gm6419	ENSMUST00000097166	processed_pseudogene		10	-1	74863416	429
ENSMUSG00000043223	processed_pseudogene	Gm4835	ENSMUST00000155839	processed_pseudogene		18	1	15988368	972
ENSMUSG00000108985	TEC	A930030B08Rik	ENSMUST00000207625	TEC		7	-1	99904156	3965
ENSMUSG00000117532	lincRNA	Gm50076	ENSMUST00000234268	lincRNA		18	-1	16144450	276
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000025713	protein_coding	principal1	19	-1	6067842	1471
ENSMUSG00000067547	transcribed_processed_pseudogene	Gm7666	ENSMUST00000146631	transcribed_processed_pseudogene		15	1	6653923	819
ENSMUSG00000040767	protein_coding	Snrnp25	ENSMUST00000039601	protein_coding	principal1	11	1	32205415	821
ENSMUSG00000101602	unprocessed_pseudogene	Gm28700	ENSMUST00000187614	unprocessed_pseudogene		Y	1	77496199	579
ENSMUSG00000022148	protein_coding	Fyb	ENSMUST00000226412	protein_coding		15	1	6522853	434
ENSMUSG00000037336	protein_coding	Mfsd2b	ENSMUST00000137337	protein_coding		12	-1	4874358	2641
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000113543	protein_coding		19	-1	6067842	1498
ENSMUSG00000037336	protein_coding	Mfsd2b	ENSMUST00000045921	protein_coding	principal1	12	-1	4874358	2490
ENSMUSG00000063628	processed_pseudogene	Gm7665	ENSMUST00000076710	processed_pseudogene		18	-1	16274944	297
ENSMUSG00000022148	protein_coding	Fyb	ENSMUST00000227175	protein_coding		15	1	6569527	480
ENSMUSG00000040767	protein_coding	Snrnp25	ENSMUST00000149043	protein_coding		11	1	32205446	466
ENSMUSG00000099953	unprocessed_pseudogene	Gm28699	ENSMUST00000189193	unprocessed_pseudogene		Y	-1	77568014	696
ENSMUSG00000032998	protein_coding	Foxj3	ENSMUST00000044564	protein_coding	principal3	4	1	119539661	4789
ENSMUSG00000040767	protein_coding	Snrnp25	ENSMUST00000155736	processed_transcript		11	1	32205458	375
ENSMUSG00000059430	protein_coding	Actg2	ENSMUST00000075161	protein_coding	principal1	6	-1	83536265	1333
ENSMUSG00000037336	protein_coding	Mfsd2b	ENSMUST00000143446	retained_intron		12	-1	4874359	2893
ENSMUSG00000102032	processed_pseudogene	Gm28705	ENSMUST00000189548	processed_pseudogene		Y	-1	77604545	315
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000161090	nonsense_mediated_decay		19	-1	6067803	1297
ENSMUSG00000040767	protein_coding	Snrnp25	ENSMUST00000121182	protein_coding		11	1	32205488	659
ENSMUSG00000037336	protein_coding	Mfsd2b	ENSMUST00000153676	retained_intron		12	-1	4869261	576
ENSMUSG00000032998	protein_coding	Foxj3	ENSMUST00000162267	protein_coding		4	1	119539685	1391
ENSMUSG00000037336	protein_coding	Mfsd2b	ENSMUST00000147241	nonsense_mediated_decay		12	-1	4874359	653
ENSMUSG00000036257	protein_coding	Pnpla8	ENSMUST00000043082	protein_coding	principal2	12	1	44269148	13507
ENSMUSG00000032998	protein_coding	Foxj3	ENSMUST00000106310	protein_coding	alternative1	4	1	119539688	4660
ENSMUSG00000044224	protein_coding	Dnajc21	ENSMUST00000136591	protein_coding	principal1	15	-1	10470516	2060
ENSMUSG00000040767	protein_coding	Snrnp25	ENSMUST00000125837	retained_intron		11	1	32206762	770
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000161718	protein_coding		19	-1	6067808	784
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000064797	protein_coding	alternative2	16	1	91729353	7418
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000162575	protein_coding		19	-1	6067785	753
ENSMUSG00000036257	protein_coding	Pnpla8	ENSMUST00000218954	protein_coding		12	1	44269167	342
ENSMUSG00000032998	protein_coding	Foxj3	ENSMUST00000161196	retained_intron		4	1	119539692	3071
ENSMUSG00000036257	protein_coding	Pnpla8	ENSMUST00000125757	protein_coding		12	1	44275271	394
ENSMUSG00000059430	protein_coding	Actg2	ENSMUST00000121731	protein_coding	principal1	6	-1	83527990	1273
ENSMUSG00000036257	protein_coding	Pnpla8	ENSMUST00000143771	protein_coding		12	1	44282573	2974
ENSMUSG00000032998	protein_coding	Foxj3	ENSMUST00000138845	protein_coding		4	1	119539698	1530
ENSMUSG00000059430	protein_coding	Actg2	ENSMUST00000124933	processed_transcript		6	-1	83526902	673
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000114002	protein_coding	principal2	16	1	91729353	14012
ENSMUSG00000015519	protein_coding	2310057J18Rik	ENSMUST00000140558	protein_coding		10	-1	28985384	1445
ENSMUSG00000059430	protein_coding	Actg2	ENSMUST00000205926	protein_coding		6	-1	83536223	716
ENSMUSG00000036257	protein_coding	Pnpla8	ENSMUST00000218803	protein_coding		12	1	44290610	811
ENSMUSG00000032998	protein_coding	Foxj3	ENSMUST00000131413	retained_intron		4	1	119539707	2447
ENSMUSG00000059430	protein_coding	Actg2	ENSMUST00000141904	protein_coding		6	-1	83527491	713
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000162810	protein_coding		19	-1	6067808	600
ENSMUSG00000036257	protein_coding	Pnpla8	ENSMUST00000156082	protein_coding		12	1	44299274	1611
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000236413	retained_intron		19	-1	6067827	3083
ENSMUSG00000112795	processed_pseudogene	Gm2027	ENSMUST00000217877	processed_pseudogene		12	1	44221745	1629
ENSMUSG00000044224	protein_coding	Dnajc21	ENSMUST00000145719	processed_transcript		15	-1	10461407	1441
ENSMUSG00000002500	protein_coding	Rpl3l	ENSMUST00000170239	protein_coding	principal1	17	1	24727820	1375
ENSMUSG00000059430	protein_coding	Actg2	ENSMUST00000152029	protein_coding		6	-1	83527810	772
ENSMUSG00000044224	protein_coding	Dnajc21	ENSMUST00000146323	retained_intron		15	-1	10449992	954
ENSMUSG00000032998	protein_coding	Foxj3	ENSMUST00000137560	protein_coding		4	1	119539779	499
ENSMUSG00000082216	polymorphic_pseudogene	Olfr271-ps1	ENSMUST00000121614	polymorphic_pseudogene		4	-1	52936381	952
ENSMUSG00000044224	protein_coding	Dnajc21	ENSMUST00000150878	retained_intron		15	-1	10451910	605
ENSMUSG00000082216	polymorphic_pseudogene	Olfr271-ps1	ENSMUST00000217546	protein_coding	principal1	4	-1	52936281	852
ENSMUSG00000002500	protein_coding	Rpl3l	ENSMUST00000183214	protein_coding		17	1	24728174	599
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000160354	retained_intron		19	-1	6067776	1443
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000095909	protein_coding		16	1	91729370	6103
ENSMUSG00000032998	protein_coding	Foxj3	ENSMUST00000160219	protein_coding		4	1	119540522	367
ENSMUSG00000044224	protein_coding	Dnajc21	ENSMUST00000147224	retained_intron		15	-1	10461928	2753
ENSMUSG00000108945	unprocessed_pseudogene	Olfr1481-ps1	ENSMUST00000207312	unprocessed_pseudogene		19	1	13535390	134
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000160417	protein_coding		19	-1	6067850	718
ENSMUSG00000032998	protein_coding	Foxj3	ENSMUST00000133097	processed_transcript		4	1	119621342	553
ENSMUSG00000081678	processed_pseudogene	Gm12959	ENSMUST00000119396	processed_pseudogene		4	-1	119554058	403
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000162549	retained_intron		19	-1	6067867	1164
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000162721	retained_intron		19	-1	6067092	550
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000161528	protein_coding		19	-1	6067855	732
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000056482	protein_coding		16	1	91729371	5364
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000159836	retained_intron		19	-1	6067561	609
ENSMUSG00000002500	protein_coding	Rpl3l	ENSMUST00000045186	protein_coding		17	1	24732685	1033
ENSMUSG00000024799	protein_coding	Tm7sf2	ENSMUST00000160028	protein_coding		19	-1	6068373	753
ENSMUSG00000092399	antisense	4930556N13Rik	ENSMUST00000173677	antisense		11	1	88851604	1034
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000113996	protein_coding		16	1	91729373	5147
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000139890	retained_intron		16	1	91729466	352
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000131983	retained_intron		16	1	91729571	488
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000113993	protein_coding		16	1	91729592	3787
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000231535	protein_coding		16	1	91730234	767
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000231974	protein_coding		16	1	91756099	728
ENSMUSG00000087385	protein_coding	Frg2f1	ENSMUST00000079611	protein_coding	principal1	4	-1	119538769	1909
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000135057	protein_coding		16	1	91782161	1110
ENSMUSG00000041236	protein_coding	Vps41	ENSMUST00000222269	processed_transcript		13	1	18717286	1183
ENSMUSG00000087385	protein_coding	Frg2f1	ENSMUST00000149305	processed_transcript		4	-1	119535245	647
ENSMUSG00000035227	protein_coding	Spcs2	ENSMUST00000036274	protein_coding	principal1	7	-1	99858977	2909
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000133389	processed_transcript		16	1	91784105	481
ENSMUSG00000087385	protein_coding	Frg2f1	ENSMUST00000137671	processed_transcript		4	-1	119539130	863
ENSMUSG00000015519	protein_coding	2310057J18Rik	ENSMUST00000152363	protein_coding		10	-1	28986293	1043
ENSMUSG00000026806	protein_coding	Ddx31	ENSMUST00000113853	protein_coding	principal1	2	1	28840459	3271
ENSMUSG00000087385	protein_coding	Frg2f1	ENSMUST00000177165	processed_transcript		4	-1	119539529	393
ENSMUSG00000035227	protein_coding	Spcs2	ENSMUST00000208477	protein_coding		7	-1	99858859	1553
ENSMUSG00000015519	protein_coding	2310057J18Rik	ENSMUST00000141350	retained_intron		10	-1	28974189	654
ENSMUSG00000035227	protein_coding	Spcs2	ENSMUST00000207406	nonsense_mediated_decay		7	-1	99858899	1630
ENSMUSG00000035227	protein_coding	Spcs2	ENSMUST00000209032	protein_coding		7	-1	99858911	1610
ENSMUSG00000026806	protein_coding	Ddx31	ENSMUST00000147071	processed_transcript		2	1	28844902	640
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000124094	processed_transcript		16	1	91804622	442
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000156841	retained_intron		16	1	91804636	355
ENSMUSG00000026806	protein_coding	Ddx31	ENSMUST00000152685	processed_transcript		2	1	28857141	581
ENSMUSG00000035227	protein_coding	Spcs2	ENSMUST00000208465	protein_coding		7	-1	99858899	736
ENSMUSG00000035227	protein_coding	Spcs2	ENSMUST00000207137	protein_coding		7	-1	99863351	881
ENSMUSG00000015519	protein_coding	2310057J18Rik	ENSMUST00000015663	protein_coding	principal1	10	-1	28986303	1238
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000151044	processed_transcript		16	1	91816826	723
ENSMUSG00000035227	protein_coding	Spcs2	ENSMUST00000207063	protein_coding		7	-1	99863371	727
ENSMUSG00000035227	protein_coding	Spcs2	ENSMUST00000207580	protein_coding		7	-1	99863371	868
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000144101	retained_intron		16	1	91827537	492
ENSMUSG00000041923	protein_coding	Nol4	ENSMUST00000092015	protein_coding		18	-1	22850754	2827
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000005722	protein_coding	alternative1	13	1	83504240	6217
ENSMUSG00000022875	protein_coding	Kng1	ENSMUST00000039492	protein_coding		16	1	23058250	1995
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000154967	retained_intron		16	1	91839699	777
ENSMUSG00000035227	protein_coding	Spcs2	ENSMUST00000208939	retained_intron		7	-1	99858876	688
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000163888	protein_coding		13	1	83504240	6277
ENSMUSG00000031596	protein_coding	Slc7a2	ENSMUST00000098816	protein_coding	alternative1	8	1	40862396	3677
ENSMUSG00000035227	protein_coding	Spcs2	ENSMUST00000208562	retained_intron		7	-1	99863462	641
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000196493	protein_coding		13	1	83523473	609
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000153741	nonsense_mediated_decay		16	1	91839788	991
ENSMUSG00000061718	protein_coding	Ppp1r1b	ENSMUST00000133700	processed_transcript		11	1	98351489	775
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000143023	protein_coding		16	1	91842628	821
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000200394	protein_coding		13	1	83524291	702
ENSMUSG00000109002	antisense	Gm38405	ENSMUST00000207760	antisense		7	-1	99889358	1140
ENSMUSG00000109002	antisense	Gm38405	ENSMUST00000208548	antisense		7	-1	99889335	400
ENSMUSG00000041923	protein_coding	Nol4	ENSMUST00000069215	protein_coding		18	-1	22850754	1902
ENSMUSG00000109002	antisense	Gm38405	ENSMUST00000208321	antisense		7	-1	99876413	364
ENSMUSG00000037172	protein_coding	Dennd11	ENSMUST00000101492	protein_coding	principal1	6	-1	40436135	6742
ENSMUSG00000022875	protein_coding	Kng1	ENSMUST00000023589	protein_coding		16	1	23058344	2255
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000126374	nonsense_mediated_decay		16	1	91853811	793
ENSMUSG00000031596	protein_coding	Slc7a2	ENSMUST00000057784	protein_coding	principal3	8	1	40862412	7910
ENSMUSG00000050199	protein_coding	Lgr4	ENSMUST00000046548	protein_coding	principal1	2	1	109917647	5060
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000138117	retained_intron		16	1	91862026	2818
ENSMUSG00000050199	protein_coding	Lgr4	ENSMUST00000111037	protein_coding		2	1	109917647	4988
ENSMUSG00000035621	protein_coding	Midn	ENSMUST00000099492	protein_coding	alternative2	10	1	80148272	3597
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000141073	processed_transcript		16	1	91877553	568
ENSMUSG00000022875	protein_coding	Kng1	ENSMUST00000089902	protein_coding	principal1	16	1	23058393	1827
ENSMUSG00000037172	protein_coding	Dennd11	ENSMUST00000039008	protein_coding		6	-1	40436133	1949
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000125052	protein_coding		16	1	91887446	1036
ENSMUSG00000031596	protein_coding	Slc7a2	ENSMUST00000141505	protein_coding		8	1	40862578	519
ENSMUSG00000037172	protein_coding	Dennd11	ENSMUST00000201712	protein_coding		6	-1	40431408	411
ENSMUSG00000050199	protein_coding	Lgr4	ENSMUST00000152584	processed_transcript		2	1	109975542	750
ENSMUSG00000037172	protein_coding	Dennd11	ENSMUST00000200994	retained_intron		6	-1	40436115	606
ENSMUSG00000050199	protein_coding	Lgr4	ENSMUST00000142869	retained_intron		2	1	110000528	635
ENSMUSG00000031596	protein_coding	Slc7a2	ENSMUST00000117077	protein_coding	alternative1	8	1	40874948	7626
ENSMUSG00000118140	processed_pseudogene	Gm4949	ENSMUST00000235767	processed_pseudogene		18	-1	38360538	1098
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000131739	nonsense_mediated_decay		16	1	91899509	422
ENSMUSG00000091478	processed_pseudogene	Gm10039	ENSMUST00000081241	processed_pseudogene		11	-1	100362126	411
ENSMUSG00000031596	protein_coding	Slc7a2	ENSMUST00000118432	protein_coding		8	1	40898438	3681
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000141625	protein_coding		16	1	91899511	519
ENSMUSG00000109951	protein_coding	Olfr601	ENSMUST00000217416	protein_coding	principal1	7	-1	103362631	2195
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000231852	protein_coding		16	1	91904029	1562
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000199019	protein_coding		13	1	83524535	4441
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000232198	processed_transcript		16	1	91904063	1167
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000231735	protein_coding		16	1	91904071	1437
ENSMUSG00000031109	protein_coding	Enox2	ENSMUST00000114914	protein_coding		X	-1	49288212	3936
ENSMUSG00000022957	protein_coding	Itsn1	ENSMUST00000137575	nonsense_mediated_decay		16	1	91911959	1055
ENSMUSG00000109951	protein_coding	Olfr601	ENSMUST00000210431	protein_coding	principal1	7	-1	103362655	2266
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000199105	protein_coding		13	1	83524613	4361
ENSMUSG00000035621	protein_coding	Midn	ENSMUST00000042057	protein_coding	principal3	10	1	80148272	3727
ENSMUSG00000076571	IG_V_gene	Igkv5-37	ENSMUST00000103372	IG_V_gene	principal1	6	-1	69963873	359
ENSMUSG00000109951	protein_coding	Olfr601	ENSMUST00000214110	protein_coding	principal1	7	-1	103362629	2196
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000196832	retained_intron		13	1	83524797	4553
ENSMUSG00000035621	protein_coding	Midn	ENSMUST00000151202	protein_coding		10	1	80149112	753
ENSMUSG00000076572	IG_V_gene	Igkv18-36	ENSMUST00000200160	IG_V_gene	principal5	6	-1	69992977	341
ENSMUSG00000109951	protein_coding	Olfr601	ENSMUST00000080474	protein_coding	principal1	7	-1	103359213	990
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000199432	protein_coding		13	1	83524854	3498
ENSMUSG00000076572	IG_V_gene	Igkv18-36	ENSMUST00000103373	IG_V_gene	alternative2	6	-1	69992977	344
ENSMUSG00000020739	protein_coding	Nup85	ENSMUST00000021085	protein_coding	principal1	11	1	115564434	2230
ENSMUSG00000035621	protein_coding	Midn	ENSMUST00000124179	processed_transcript		10	1	80149886	750
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000198069	protein_coding		13	1	83524855	689
ENSMUSG00000076573	IG_V_gene	Igkv1-35	ENSMUST00000197820	IG_V_gene	principal5	6	-1	70011673	362
ENSMUSG00000035621	protein_coding	Midn	ENSMUST00000153477	protein_coding		10	1	80150457	459
ENSMUSG00000076573	IG_V_gene	Igkv1-35	ENSMUST00000103374	IG_V_gene	alternative2	6	-1	70011673	359
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000197681	protein_coding		13	1	83524861	2753
ENSMUSG00000035621	protein_coding	Midn	ENSMUST00000146516	protein_coding		10	1	80151154	835
ENSMUSG00000020739	protein_coding	Nup85	ENSMUST00000135893	processed_transcript		11	1	115564525	600
ENSMUSG00000105971	TEC	Gm43805	ENSMUST00000198488	TEC		3	1	53112166	824
ENSMUSG00000106226	IG_V_pseudogene	Gm43586	ENSMUST00000195948	IG_V_pseudogene		6	-1	70040647	310
ENSMUSG00000020739	protein_coding	Nup85	ENSMUST00000144473	protein_coding		11	1	115570115	823
ENSMUSG00000104687	TEC	Gm42899	ENSMUST00000197034	TEC		3	1	53083219	2667
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000197722	protein_coding		13	1	83524866	3517
ENSMUSG00000020739	protein_coding	Nup85	ENSMUST00000140986	protein_coding		11	1	115577984	841
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000197938	protein_coding		13	1	83524891	1060
ENSMUSG00000104769	IG_V_gene	Igkv8-34	ENSMUST00000196959	IG_V_gene	principal1	6	-1	70044678	365
ENSMUSG00000035621	protein_coding	Midn	ENSMUST00000144526	protein_coding		10	1	80151238	397
ENSMUSG00000020739	protein_coding	Nup85	ENSMUST00000143351	processed_transcript		11	1	115580504	649
ENSMUSG00000022148	protein_coding	Fyb	ENSMUST00000090461	protein_coding	principal1	15	1	6579871	2669
ENSMUSG00000020739	protein_coding	Nup85	ENSMUST00000127126	processed_transcript		11	1	115581096	478
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000199262	retained_intron		13	1	83524920	1391
ENSMUSG00000076575	IG_V_gene	Igkv7-33	ENSMUST00000197429	IG_V_gene	principal5	6	-1	70059199	365
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000198064	protein_coding		13	1	83530138	556
ENSMUSG00000076575	IG_V_gene	Igkv7-33	ENSMUST00000103376	IG_V_gene	alternative2	6	-1	70059199	362
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000196730	protein_coding		13	1	83572348	913
ENSMUSG00000024286	protein_coding	Ccny	ENSMUST00000053917	protein_coding	principal1	18	-1	9450150	5757
ENSMUSG00000022148	protein_coding	Fyb	ENSMUST00000159714	retained_intron		15	1	6579892	2170
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000196207	protein_coding		13	1	83572381	623
ENSMUSG00000034557	protein_coding	Zfyve9	ENSMUST00000106657	protein_coding	principal2	4	-1	108780798	6459
ENSMUSG00000034557	protein_coding	Zfyve9	ENSMUST00000106658	protein_coding	alternative2	4	-1	108780503	5987
ENSMUSG00000042857	bidirectional_promoter_lncRNA	Gm9776	ENSMUST00000221110	bidirectional_promoter_lncRNA		13	-1	94358923	2177
ENSMUSG00000028274	protein_coding	Rngtt	ENSMUST00000029942	protein_coding	alternative2	4	1	33310328	2379
ENSMUSG00000024286	protein_coding	Ccny	ENSMUST00000234102	protein_coding		18	-1	9449970	2505
ENSMUSG00000071340	protein_coding	Trappc3l	ENSMUST00000095758	protein_coding	principal1	10	1	34037597	1185
ENSMUSG00000042857	bidirectional_promoter_lncRNA	Gm9776	ENSMUST00000059598	bidirectional_promoter_lncRNA		13	-1	94358818	2980
ENSMUSG00000022148	protein_coding	Fyb	ENSMUST00000160612	processed_transcript		15	1	6585002	447
ENSMUSG00000020739	protein_coding	Nup85	ENSMUST00000138998	processed_transcript		11	1	115581641	760
ENSMUSG00000022148	protein_coding	Fyb	ENSMUST00000162430	retained_intron		15	1	6619594	332
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000197146	protein_coding		13	1	83573607	6088
ENSMUSG00000020739	protein_coding	Nup85	ENSMUST00000128745	processed_transcript		11	1	115581748	452
ENSMUSG00000022148	protein_coding	Fyb	ENSMUST00000163073	protein_coding		15	1	6643686	662
ENSMUSG00000071340	protein_coding	Trappc3l	ENSMUST00000220095	protein_coding		10	1	34060022	691
ENSMUSG00000020739	protein_coding	Nup85	ENSMUST00000134209	processed_transcript		11	1	115583057	434
ENSMUSG00000034557	protein_coding	Zfyve9	ENSMUST00000042185	protein_coding		4	-1	108723876	2170
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000197022	retained_intron		13	1	83573618	3032
ENSMUSG00000115810	bidirectional_promoter_lncRNA	Gm49066	ENSMUST00000226643	bidirectional_promoter_lncRNA		15	1	73423311	799
ENSMUSG00000022148	protein_coding	Fyb	ENSMUST00000159604	retained_intron		15	1	6646059	736
ENSMUSG00000024286	protein_coding	Ccny	ENSMUST00000234779	nonsense_mediated_decay		18	-1	9386809	1341
ENSMUSG00000048332	protein_coding	Lhfp	ENSMUST00000059562	protein_coding	principal1	3	1	53041528	2108
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000185052	protein_coding	alternative1	13	1	83573622	3556
ENSMUSG00000022148	protein_coding	Fyb	ENSMUST00000162154	processed_transcript		15	1	6654511	569
ENSMUSG00000024286	protein_coding	Ccny	ENSMUST00000234844	nonsense_mediated_decay		18	-1	9449686	1354
ENSMUSG00000111766	unitary_pseudogene	Gm47873	ENSMUST00000216356	unitary_pseudogene		9	1	21872274	565
ENSMUSG00000028274	protein_coding	Rngtt	ENSMUST00000108153	protein_coding	principal3	4	1	33310311	4157
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000138349	protein_coding		2	1	11705290	1936
ENSMUSG00000048332	protein_coding	Lhfp	ENSMUST00000137954	processed_transcript		3	1	53041559	1545
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000195984	protein_coding		13	1	83573625	873
ENSMUSG00000024286	protein_coding	Ccny	ENSMUST00000234382	retained_intron		18	-1	9450154	1046
ENSMUSG00000048332	protein_coding	Lhfp	ENSMUST00000147139	protein_coding	principal1	3	1	53041583	1932
ENSMUSG00000022148	protein_coding	Fyb	ENSMUST00000161947	retained_intron		15	1	6660405	412
ENSMUSG00000090009	antisense	Gm16282	ENSMUST00000162641	antisense		7	-1	29140312	451
ENSMUSG00000117448	TEC	Gm50055	ENSMUST00000234877	TEC		18	-1	9436850	2028
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000199167	protein_coding		13	1	83575145	854
ENSMUSG00000049872	protein_coding	Calhm5	ENSMUST00000069125	protein_coding	principal1	10	-1	34096519	5323
ENSMUSG00000028274	protein_coding	Rngtt	ENSMUST00000130138	processed_transcript		4	1	33322236	2768
ENSMUSG00000048332	protein_coding	Lhfp	ENSMUST00000196913	retained_intron		3	1	53229325	3099
ENSMUSG00000099098	antisense	1110035H17Rik	ENSMUST00000184073	antisense		7	1	29155680	1241
ENSMUSG00000100797	unprocessed_pseudogene	Gm28596	ENSMUST00000185870	unprocessed_pseudogene		Y	1	40843557	696
ENSMUSG00000018983	protein_coding	E2f2	ENSMUST00000061721	protein_coding	principal1	4	1	136172394	4739
ENSMUSG00000104850	antisense	Gm42901	ENSMUST00000197735	antisense		3	-1	53041755	3171
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000195904	protein_coding		13	1	83575210	976
ENSMUSG00000099645	unprocessed_pseudogene	Gm20832	ENSMUST00000189076	unprocessed_pseudogene		Y	-1	40935589	665
ENSMUSG00000099098	antisense	1110035H17Rik	ENSMUST00000205672	pseudogene		7	1	29155680	1231
ENSMUSG00000116174	processed_pseudogene	Gm10362	ENSMUST00000229262	processed_pseudogene		15	-1	73428910	552
ENSMUSG00000089647	antisense	Gm2245	ENSMUST00000160698	antisense		15	-1	6654303	3376
ENSMUSG00000028274	protein_coding	Rngtt	ENSMUST00000155397	processed_transcript		4	1	33324898	783
ENSMUSG00000104968	antisense	Gm43803	ENSMUST00000197765	antisense		3	-1	53113411	580
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000198217	protein_coding		13	1	83575677	1257
ENSMUSG00000104968	antisense	Gm43803	ENSMUST00000196732	antisense		3	-1	53111715	448
ENSMUSG00000115885	processed_pseudogene	Gm19811	ENSMUST00000230637	processed_pseudogene		15	-1	73497297	260
ENSMUSG00000028274	protein_coding	Rngtt	ENSMUST00000146870	processed_transcript		4	1	33331014	694
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000199210	protein_coding		13	1	83575677	1185
ENSMUSG00000081206	processed_pseudogene	Gm11935	ENSMUST00000118608	processed_pseudogene		4	-1	33452889	399
ENSMUSG00000100823	lincRNA	Gm28704	ENSMUST00000186589	lincRNA		Y	-1	77609301	2169
ENSMUSG00000089647	antisense	Gm2245	ENSMUST00000228703	antisense		15	-1	6606882	399
ENSMUSG00000104615	TEC	Gm43804	ENSMUST00000198280	TEC		3	1	53109668	456
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000200138	protein_coding		13	1	83625603	1011
ENSMUSG00000039508	protein_coding	Calhm4	ENSMUST00000048052	protein_coding	principal1	10	-1	34044310	3711
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000073534	protein_coding	principal2	17	1	28177129	2864
ENSMUSG00000100091	unprocessed_pseudogene	Gm28597	ENSMUST00000187664	unprocessed_pseudogene		Y	1	41243623	666
ENSMUSG00000104735	TEC	C130075A20Rik	ENSMUST00000198178	TEC		3	1	53099000	4176
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000191758	protein_coding	principal2	3	-1	84040175	5555
ENSMUSG00000061718	protein_coding	Ppp1r1b	ENSMUST00000078694	protein_coding	principal1	11	1	98348404	2001
ENSMUSG00000018983	protein_coding	E2f2	ENSMUST00000149750	processed_transcript		4	1	136180783	426
ENSMUSG00000099416	lincRNA	Gm28540	ENSMUST00000189573	lincRNA		Y	1	77643677	1498
ENSMUSG00000104828	TEC	Gm42898	ENSMUST00000200370	TEC		3	-1	53075237	3073
ENSMUSG00000039508	protein_coding	Calhm4	ENSMUST00000218239	protein_coding		10	-1	34044297	3075
ENSMUSG00000109110	antisense	Gm45014	ENSMUST00000207657	antisense		7	-1	81862527	405
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000198360	nonsense_mediated_decay		13	1	83633061	546
ENSMUSG00000099416	lincRNA	Gm28540	ENSMUST00000188256	lincRNA		Y	1	77644130	437
ENSMUSG00000115456	lincRNA	Gm35248	ENSMUST00000227097	lincRNA		15	1	38312293	527
ENSMUSG00000082739	transcribed_unprocessed_pseudogene	Olfr602-ps1	ENSMUST00000118403	transcribed_unprocessed_pseudogene		7	-1	103368467	948
ENSMUSG00000005583	protein_coding	Mef2c	ENSMUST00000197145	protein_coding		13	1	83652888	724
ENSMUSG00000113819	processed_pseudogene	Gm48017	ENSMUST00000220914	processed_pseudogene		13	1	14041392	208
ENSMUSG00000082739	transcribed_unprocessed_pseudogene	Olfr602-ps1	ENSMUST00000218213	processed_transcript		7	-1	103372443	1169
ENSMUSG00000037416	protein_coding	Dmxl1	ENSMUST00000180611	protein_coding	principal2	18	1	49832670	11319
ENSMUSG00000049744	protein_coding	Arhgap15	ENSMUST00000055776	protein_coding	principal1	2	1	43748870	2604
ENSMUSG00000115405	lincRNA	Gm41307	ENSMUST00000227422	lincRNA		15	-1	38404154	686
ENSMUSG00000059874	protein_coding	Olfr603	ENSMUST00000218246	protein_coding	principal1	7	-1	103386177	1021
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000192095	protein_coding	alternative2	3	-1	84040137	4774
ENSMUSG00000059874	protein_coding	Olfr603	ENSMUST00000071844	protein_coding	principal1	7	-1	103384000	939
ENSMUSG00000061718	protein_coding	Ppp1r1b	ENSMUST00000150762	protein_coding		11	1	98349996	1801
ENSMUSG00000035211	protein_coding	Xrra1	ENSMUST00000036155	protein_coding	principal2	7	1	99859116	2731
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000052342	protein_coding	alternative2	3	-1	84040175	4815
ENSMUSG00000049744	protein_coding	Arhgap15	ENSMUST00000112824	protein_coding		2	1	43748824	3118
ENSMUSG00000046841	protein_coding	Ckap4	ENSMUST00000053871	protein_coding	principal1	10	-1	84534062	3089
ENSMUSG00000042155	protein_coding	Klhl23	ENSMUST00000135759	processed_transcript		2	1	69821944	653
ENSMUSG00000061718	protein_coding	Ppp1r1b	ENSMUST00000147415	retained_intron		11	1	98351215	792
ENSMUSG00000035211	protein_coding	Xrra1	ENSMUST00000208354	nonsense_mediated_decay		7	1	99863502	1391
ENSMUSG00000115009	lincRNA	G930009F23Rik	ENSMUST00000228650	lincRNA		15	-1	38455134	2819
ENSMUSG00000061718	protein_coding	Ppp1r1b	ENSMUST00000152525	processed_transcript		11	1	98354596	435
ENSMUSG00000037416	protein_coding	Dmxl1	ENSMUST00000181907	retained_intron		18	1	49894096	2916
ENSMUSG00000035211	protein_coding	Xrra1	ENSMUST00000207855	protein_coding	alternative2	7	1	99863625	1334
ENSMUSG00000037416	protein_coding	Dmxl1	ENSMUST00000224938	protein_coding		18	1	49922713	70
ENSMUSG00000117741	lincRNA	1700080C20Rik	ENSMUST00000236363	lincRNA		17	1	25760202	186
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000195245	processed_transcript		3	-1	83909218	468
ENSMUSG00000037416	protein_coding	Dmxl1	ENSMUST00000181828	retained_intron		18	1	49950099	4613
ENSMUSG00000058976	protein_coding	Usp17lc	ENSMUST00000106892	protein_coding	principal1	7	1	103415072	2403
ENSMUSG00000061718	protein_coding	Ppp1r1b	ENSMUST00000132443	retained_intron		11	1	98350855	1191
ENSMUSG00000098028	processed_pseudogene	Gm8824	ENSMUST00000182962	processed_pseudogene		16	1	50111073	990
ENSMUSG00000037416	protein_coding	Dmxl1	ENSMUST00000181042	retained_intron		18	1	49955975	3669
ENSMUSG00000094647	protein_coding	Gm21650	ENSMUST00000190551	protein_coding	principal5	Y	1	77692808	923
ENSMUSG00000035211	protein_coding	Xrra1	ENSMUST00000208270	retained_intron		7	1	99902706	628
ENSMUSG00000046841	protein_coding	Ckap4	ENSMUST00000167671	protein_coding	principal1	10	-1	84534036	2606
ENSMUSG00000035211	protein_coding	Xrra1	ENSMUST00000208449	retained_intron		7	1	99906162	1809
ENSMUSG00000094647	protein_coding	Gm21650	ENSMUST00000179073	protein_coding	alternative2	Y	1	77694232	567
ENSMUSG00000061718	protein_coding	Ppp1r1b	ENSMUST00000137634	protein_coding		11	1	98349996	1343
ENSMUSG00000058976	protein_coding	Usp17lc	ENSMUST00000079348	protein_coding	principal1	7	1	103416696	1697
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000199411	retained_intron		3	-1	83907579	1524
ENSMUSG00000031060	protein_coding	Rbm10	ENSMUST00000115375	protein_coding	alternative1	X	1	20617503	3698
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000233841	nonsense_mediated_decay		17	1	28177163	2322
ENSMUSG00000099646	lincRNA	Gm28541	ENSMUST00000185206	lincRNA		Y	-1	77752125	442
ENSMUSG00000087579	antisense	Hectd2os	ENSMUST00000149601	antisense		19	-1	36705641	973
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000194993	retained_intron		3	-1	83909544	749
ENSMUSG00000049744	protein_coding	Arhgap15	ENSMUST00000112822	nonsense_mediated_decay		2	1	43748834	2714
ENSMUSG00000107754	processed_pseudogene	Gm44990	ENSMUST00000203922	processed_pseudogene		6	-1	132333806	217
ENSMUSG00000060742	protein_coding	Olfr1076	ENSMUST00000076263	protein_coding	principal1	2	1	86508461	942
ENSMUSG00000099535	unprocessed_pseudogene	Gm28542	ENSMUST00000185545	unprocessed_pseudogene		Y	-1	77780843	696
ENSMUSG00000037416	protein_coding	Dmxl1	ENSMUST00000041772	protein_coding	alternative2	18	1	49832997	12247
ENSMUSG00000085944	processed_transcript	1700003D09Rik	ENSMUST00000141929	processed_transcript		11	-1	98358283	1389
ENSMUSG00000107626	processed_pseudogene	Gm44727	ENSMUST00000204225	processed_pseudogene		6	-1	132339308	451
ENSMUSG00000093827	unprocessed_pseudogene	Gm10410	ENSMUST00000180138	unprocessed_pseudogene		14	1	4938879	384
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000123398	retained_intron		10	1	73099342	2436
ENSMUSG00000030134	protein_coding	Rasgef1a	ENSMUST00000164960	protein_coding	alternative1	6	1	118011438	3284
ENSMUSG00000058028	protein_coding	Zscan5b	ENSMUST00000072662	protein_coding	principal1	7	1	6222278	1980
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000148572	retained_intron		10	1	73099435	2712
ENSMUSG00000031109	protein_coding	Enox2	ENSMUST00000114918	protein_coding		X	-1	49288242	3226
ENSMUSG00000087579	antisense	Hectd2os	ENSMUST00000142067	antisense		19	-1	36689479	2662
ENSMUSG00000041236	protein_coding	Vps41	ENSMUST00000072961	protein_coding	principal1	13	1	18717290	3199
ENSMUSG00000058028	protein_coding	Zscan5b	ENSMUST00000155314	protein_coding		7	1	6222295	577
ENSMUSG00000097076	lincRNA	Platr7	ENSMUST00000181466	lincRNA		10	-1	84553338	1334
ENSMUSG00000087579	antisense	Hectd2os	ENSMUST00000147754	antisense		19	-1	36626024	2281
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000156999	retained_intron		10	1	73099453	1024
ENSMUSG00000058028	protein_coding	Zscan5b	ENSMUST00000165445	protein_coding	principal1	7	1	6230179	1407
ENSMUSG00000087579	antisense	Hectd2os	ENSMUST00000129953	antisense		19	-1	36626004	2227
ENSMUSG00000031109	protein_coding	Enox2	ENSMUST00000033437	protein_coding		X	-1	49288242	3170
ENSMUSG00000049744	protein_coding	Arhgap15	ENSMUST00000140528	processed_transcript		2	1	43748869	4709
ENSMUSG00000087579	antisense	Hectd2os	ENSMUST00000150138	antisense		19	-1	36658584	460
ENSMUSG00000111678	polymorphic_pseudogene	Olfr1077-ps1	ENSMUST00000213225	polymorphic_pseudogene	principal1	2	-1	86528427	1212
ENSMUSG00000100649	unprocessed_pseudogene	Gm28428	ENSMUST00000188886	unprocessed_pseudogene		Y	-1	41339524	697
ENSMUSG00000049744	protein_coding	Arhgap15	ENSMUST00000128630	processed_transcript		2	1	44065041	397
ENSMUSG00000087579	antisense	Hectd2os	ENSMUST00000144045	antisense		19	-1	36689273	398
ENSMUSG00000030590	protein_coding	Fam98c	ENSMUST00000164589	protein_coding	principal1	7	-1	29156234	1293
ENSMUSG00000041923	protein_coding	Nol4	ENSMUST00000081423	protein_coding		18	-1	23038656	3309
ENSMUSG00000080924	unprocessed_pseudogene	Olfr1078-ps1	ENSMUST00000117978	unprocessed_pseudogene		2	-1	86530427	632
ENSMUSG00000042228	protein_coding	Lyn	ENSMUST00000041377	protein_coding	alternative1	4	1	3678115	3463
ENSMUSG00000041236	protein_coding	Vps41	ENSMUST00000222813	processed_transcript		13	1	18779843	679
ENSMUSG00000031109	protein_coding	Enox2	ENSMUST00000114911	protein_coding		X	-1	49288242	2623
ENSMUSG00000100196	unprocessed_pseudogene	Gm20827	ENSMUST00000187928	unprocessed_pseudogene		Y	-1	41376429	696
ENSMUSG00000085089	antisense	Arhgap15os	ENSMUST00000139948	antisense		2	-1	44065324	1761
ENSMUSG00000052562	protein_coding	Slc22a30	ENSMUST00000096269	protein_coding	principal1	19	-1	8405111	2255
ENSMUSG00000031060	protein_coding	Rbm10	ENSMUST00000115374	protein_coding	principal3	X	1	20617622	3564
ENSMUSG00000042155	protein_coding	Klhl23	ENSMUST00000053087	protein_coding	principal1	2	1	69822370	4617
ENSMUSG00000041236	protein_coding	Vps41	ENSMUST00000222010	retained_intron		13	1	18823795	629
ENSMUSG00000087579	antisense	Hectd2os	ENSMUST00000146407	antisense		19	-1	36689332	338
ENSMUSG00000041236	protein_coding	Vps41	ENSMUST00000222102	retained_intron		13	1	18844863	2203
ENSMUSG00000031109	protein_coding	Enox2	ENSMUST00000114912	protein_coding	principal1	X	-1	49288242	3167
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000194432	processed_transcript		3	-1	83968228	3747
ENSMUSG00000030134	protein_coding	Rasgef1a	ENSMUST00000203804	protein_coding		6	1	118066419	2183
ENSMUSG00000117503	processed_pseudogene	Gm7527	ENSMUST00000234250	processed_pseudogene		18	1	9495621	889
ENSMUSG00000087579	antisense	Hectd2os	ENSMUST00000128603	antisense		19	-1	36689328	309
ENSMUSG00000031060	protein_coding	Rbm10	ENSMUST00000084383	protein_coding	alternative1	X	1	20617783	3172
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000194522	processed_transcript		3	-1	83943743	582
ENSMUSG00000042155	protein_coding	Klhl23	ENSMUST00000152898	processed_transcript		2	1	69824354	839
ENSMUSG00000052562	protein_coding	Slc22a30	ENSMUST00000064507	protein_coding		19	-1	8405060	1888
ENSMUSG00000099628	lincRNA	Gm28427	ENSMUST00000190144	lincRNA		Y	-1	41385771	2162
ENSMUSG00000056412	processed_pseudogene	Psenen-ps	ENSMUST00000121600	processed_pseudogene		4	-1	40775564	306
ENSMUSG00000030134	protein_coding	Rasgef1a	ENSMUST00000203482	protein_coding	principal3	6	1	118066419	2227
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000193696	retained_intron		3	-1	84040128	1561
ENSMUSG00000036676	protein_coding	Tmtc3	ENSMUST00000058154	protein_coding	alternative2	10	-1	100487350	5993
ENSMUSG00000052562	protein_coding	Slc22a30	ENSMUST00000120540	protein_coding		19	-1	8405105	2598
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000145313	retained_intron		17	1	28177207	3350
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000192283	retained_intron		3	-1	84040161	2354
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000233458	retained_intron		17	1	28177402	4609
ENSMUSG00000033767	protein_coding	Tmem131l	ENSMUST00000192811	retained_intron		3	-1	84040134	2760
ENSMUSG00000041923	protein_coding	Nol4	ENSMUST00000097651	protein_coding		18	-1	23041653	4549
ENSMUSG00000042228	protein_coding	Lyn	ENSMUST00000103010	protein_coding	principal3	4	1	3678127	3387
ENSMUSG00000041923	protein_coding	Nol4	ENSMUST00000164893	protein_coding	alternative1	18	-1	23040078	2175
ENSMUSG00000031109	protein_coding	Enox2	ENSMUST00000137518	processed_transcript		X	-1	49288212	968
ENSMUSG00000110711	TEC	Gm45760	ENSMUST00000212190	TEC		8	1	95870814	1782
ENSMUSG00000031109	protein_coding	Enox2	ENSMUST00000141393	processed_transcript		X	-1	49288242	457
ENSMUSG00000041923	protein_coding	Nol4	ENSMUST00000164186	protein_coding	principal4	18	-1	23040344	2622
ENSMUSG00000031109	protein_coding	Enox2	ENSMUST00000155770	processed_transcript		X	-1	49288259	636
ENSMUSG00000036676	protein_coding	Tmtc3	ENSMUST00000099318	protein_coding	principal3	10	-1	100487347	2794
ENSMUSG00000042228	protein_coding	Lyn	ENSMUST00000145083	processed_transcript		4	1	3678130	687
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000002318	protein_coding	principal2	17	1	28177418	2710
ENSMUSG00000041923	protein_coding	Nol4	ENSMUST00000165323	protein_coding		18	-1	23038939	477
ENSMUSG00000032985	protein_coding	5730522E02Rik	ENSMUST00000153834	processed_transcript		11	-1	25648147	473
ENSMUSG00000042228	protein_coding	Lyn	ENSMUST00000137943	processed_transcript		4	1	3756457	685
ENSMUSG00000032985	protein_coding	5730522E02Rik	ENSMUST00000144503	processed_transcript		11	-1	25620098	927
ENSMUSG00000031109	protein_coding	Enox2	ENSMUST00000167659	protein_coding		X	-1	49080752	3632
ENSMUSG00000041923	protein_coding	Nol4	ENSMUST00000164521	processed_transcript		18	-1	22828362	345
ENSMUSG00000083186	processed_pseudogene	Gm11805	ENSMUST00000121238	processed_pseudogene		4	-1	3721026	600
ENSMUSG00000049515	protein_coding	Espnl	ENSMUST00000088904	protein_coding	principal1	1	1	91322075	5445
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000161275	nonsense_mediated_decay		17	1	28177449	1241
ENSMUSG00000082347	processed_pseudogene	Gm15036	ENSMUST00000118880	processed_pseudogene		X	1	49164908	400
ENSMUSG00000036676	protein_coding	Tmtc3	ENSMUST00000130883	retained_intron		10	-1	100487339	2780
ENSMUSG00000049515	protein_coding	Espnl	ENSMUST00000176156	protein_coding		1	1	91322133	2886
ENSMUSG00000019832	protein_coding	Rab32	ENSMUST00000019974	protein_coding	principal1	10	-1	10558265	2149
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000233904	protein_coding	alternative2	17	1	28177458	2368
ENSMUSG00000041923	protein_coding	Nol4	ENSMUST00000097652	processed_transcript		18	-1	22952310	277
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000233613	protein_coding	principal2	17	1	28186187	2491
ENSMUSG00000032985	protein_coding	5730522E02Rik	ENSMUST00000125773	processed_transcript		11	-1	26210569	691
ENSMUSG00000105713	processed_pseudogene	Gm43827	ENSMUST00000200623	processed_pseudogene		5	1	24240512	1390
ENSMUSG00000028834	protein_coding	Trim63	ENSMUST00000030638	protein_coding	alternative2	4	1	134315122	1855
ENSMUSG00000031060	protein_coding	Rbm10	ENSMUST00000141128	processed_transcript		X	1	20617785	2160
ENSMUSG00000028834	protein_coding	Trim63	ENSMUST00000134164	retained_intron		4	1	134315212	1152
ENSMUSG00000036676	protein_coding	Tmtc3	ENSMUST00000128009	protein_coding		10	-1	100487267	535
ENSMUSG00000030590	protein_coding	Fam98c	ENSMUST00000134176	protein_coding		7	-1	29156183	1189
ENSMUSG00000019832	protein_coding	Rab32	ENSMUST00000220018	nonsense_mediated_decay		10	-1	10558181	1062
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000133868	protein_coding		17	1	28197785	876
ENSMUSG00000032985	protein_coding	5730522E02Rik	ENSMUST00000109511	protein_coding	principal5	11	-1	26210572	1162
ENSMUSG00000036676	protein_coding	Tmtc3	ENSMUST00000134477	protein_coding		10	-1	100487326	347
ENSMUSG00000117435	processed_pseudogene	Gm7532	ENSMUST00000234348	processed_pseudogene		18	1	9538258	1509
ENSMUSG00000031060	protein_coding	Rbm10	ENSMUST00000082089	protein_coding	alternative1	X	1	20620098	2562
ENSMUSG00000032985	protein_coding	5730522E02Rik	ENSMUST00000144841	processed_transcript		11	-1	25652068	3117
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000232845	nonsense_mediated_decay		17	1	28200147	1040
ENSMUSG00000032985	protein_coding	5730522E02Rik	ENSMUST00000135168	processed_transcript		11	-1	26081600	420
ENSMUSG00000031060	protein_coding	Rbm10	ENSMUST00000177738	protein_coding	alternative1	X	1	20620098	2790
ENSMUSG00000028834	protein_coding	Trim63	ENSMUST00000135576	processed_transcript		4	1	134319988	1428
ENSMUSG00000108871	TEC	Gm45102	ENSMUST00000207427	TEC		7	1	67759317	857
ENSMUSG00000079009	protein_coding	Gm14139	ENSMUST00000109926	protein_coding	principal1	2	1	150181755	1728
ENSMUSG00000031060	protein_coding	Rbm10	ENSMUST00000064911	protein_coding	principal3	X	1	20620098	2793
ENSMUSG00000079009	protein_coding	Gm14139	ENSMUST00000109929	protein_coding		2	1	150190393	1485
ENSMUSG00000032985	protein_coding	5730522E02Rik	ENSMUST00000125987	processed_transcript		11	-1	26210763	539
ENSMUSG00000032985	protein_coding	5730522E02Rik	ENSMUST00000179180	protein_coding	alternative2	11	-1	25769141	450
ENSMUSG00000025396	protein_coding	Hsd17b6	ENSMUST00000219447	protein_coding	principal1	10	-1	128007508	1459
ENSMUSG00000026019	protein_coding	Wdr12	ENSMUST00000027173	protein_coding	principal1	1	-1	60097908	10012
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000129522	nonsense_mediated_decay		17	1	28202115	1463
ENSMUSG00000103242	processed_pseudogene	Gm34767	ENSMUST00000191813	processed_pseudogene		1	-1	165735661	1062
ENSMUSG00000111260	processed_pseudogene	Gm47714	ENSMUST00000214310	processed_pseudogene		9	1	30489959	418
ENSMUSG00000025396	protein_coding	Hsd17b6	ENSMUST00000219183	protein_coding	principal1	10	-1	128007611	1522
ENSMUSG00000099897	lincRNA	Gm28426	ENSMUST00000189840	lincRNA		Y	1	41417432	435
ENSMUSG00000028834	protein_coding	Trim63	ENSMUST00000105875	protein_coding	principal2	4	1	134315120	1886
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000155030	protein_coding		17	1	28202291	568
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000233021	retained_intron		17	1	28202792	642
ENSMUSG00000099897	lincRNA	Gm28426	ENSMUST00000187385	lincRNA		Y	1	41417432	620
ENSMUSG00000025396	protein_coding	Hsd17b6	ENSMUST00000219707	protein_coding		10	-1	128007594	645
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000163666	protein_coding	principal1	11	-1	69672317	1774
ENSMUSG00000117349	processed_pseudogene	Gm7274	ENSMUST00000235092	processed_pseudogene		18	1	9543831	2059
ENSMUSG00000024220	protein_coding	Zfp523	ENSMUST00000151595	retained_intron		17	1	28204109	657
ENSMUSG00000060336	protein_coding	Zfp937	ENSMUST00000073782	protein_coding	principal1	2	1	150218073	2797
ENSMUSG00000025396	protein_coding	Hsd17b6	ENSMUST00000219953	protein_coding		10	-1	128007594	556
ENSMUSG00000117641	processed_pseudogene	Gm46641	ENSMUST00000234100	processed_pseudogene		18	1	9547297	2777
ENSMUSG00000025396	protein_coding	Hsd17b6	ENSMUST00000219780	protein_coding		10	-1	128007579	401
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000091456	processed_transcript		2	1	11705329	921
ENSMUSG00000089886	processed_pseudogene	Gm16184	ENSMUST00000162324	processed_pseudogene		7	1	19911825	573
ENSMUSG00000117171	bidirectional_promoter_lncRNA	C230013L11Rik	ENSMUST00000233181	bidirectional_promoter_lncRNA		17	-1	28177682	3026
ENSMUSG00000100608	protein_coding	Gm21996	ENSMUST00000188269	protein_coding	principal1	Y	-1	89745532	931
ENSMUSG00000075179	protein_coding	Olfr1079	ENSMUST00000111582	protein_coding	alternative2	2	-1	86542480	2141
ENSMUSG00000075179	protein_coding	Olfr1079	ENSMUST00000216480	protein_coding	alternative2	2	-1	86542480	2071
ENSMUSG00000081071	processed_pseudogene	Gm9836	ENSMUST00000117132	processed_pseudogene		5	1	24256822	216
ENSMUSG00000095839	protein_coding	Olfr965	ENSMUST00000215164	protein_coding	principal1	9	1	39711353	1722
ENSMUSG00000106849	TEC	Gm43418	ENSMUST00000201334	TEC		5	-1	130618551	428
ENSMUSG00000090075	antisense	Gm16251	ENSMUST00000162649	antisense		7	1	19920729	338
ENSMUSG00000075179	protein_coding	Olfr1079	ENSMUST00000099882	protein_coding	principal2	2	-1	86538913	948
ENSMUSG00000016534	protein_coding	Lamp2	ENSMUST00000074913	protein_coding	alternative2	X	-1	38456454	2184
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000135341	protein_coding		2	1	11705349	1545
ENSMUSG00000038623	protein_coding	Tm6sf1	ENSMUST00000041890	protein_coding	principal1	7	1	81859001	2226
ENSMUSG00000095839	protein_coding	Olfr965	ENSMUST00000213335	protein_coding	principal1	9	1	39711375	1700
ENSMUSG00000112627	bidirectional_promoter_lncRNA	4933412E12Rik	ENSMUST00000220066	bidirectional_promoter_lncRNA		10	1	116949757	639
ENSMUSG00000025396	protein_coding	Hsd17b6	ENSMUST00000026462	protein_coding	principal1	10	-1	128000678	1392
ENSMUSG00000083065	processed_pseudogene	Gm13195	ENSMUST00000117229	processed_pseudogene		4	-1	134335758	261
ENSMUSG00000112627	bidirectional_promoter_lncRNA	4933412E12Rik	ENSMUST00000220251	bidirectional_promoter_lncRNA		10	1	116950567	676
ENSMUSG00000095839	protein_coding	Olfr965	ENSMUST00000069342	protein_coding	principal1	9	1	39719229	939
ENSMUSG00000112627	bidirectional_promoter_lncRNA	4933412E12Rik	ENSMUST00000217853	bidirectional_promoter_lncRNA		10	1	116950588	1698
ENSMUSG00000035413	protein_coding	Tmem98	ENSMUST00000040865	protein_coding	principal1	11	1	80810175	1633
ENSMUSG00000030590	protein_coding	Fam98c	ENSMUST00000150431	retained_intron		7	-1	29156183	1632
ENSMUSG00000030590	protein_coding	Fam98c	ENSMUST00000147561	retained_intron		7	-1	29156183	2169
ENSMUSG00000079008	protein_coding	Gm14124	ENSMUST00000109922	protein_coding	principal1	2	1	150257517	3018
ENSMUSG00000016534	protein_coding	Lamp2	ENSMUST00000016678	protein_coding	alternative2	X	-1	38456454	1769
ENSMUSG00000038623	protein_coding	Tm6sf1	ENSMUST00000126334	nonsense_mediated_decay		7	1	81859151	2251
ENSMUSG00000018428	protein_coding	Akap1	ENSMUST00000107903	protein_coding	principal2	11	-1	88851503	3721
ENSMUSG00000030590	protein_coding	Fam98c	ENSMUST00000123545	retained_intron		7	-1	29156203	1359
ENSMUSG00000030143	protein_coding	Gm8882	ENSMUST00000080849	protein_coding	principal1	6	-1	132364134	1240
ENSMUSG00000084320	transcribed_processed_pseudogene	Gm14125	ENSMUST00000113442	processed_transcript		2	1	150305528	680
ENSMUSG00000030590	protein_coding	Fam98c	ENSMUST00000144795	protein_coding		7	-1	29156160	964
ENSMUSG00000084320	transcribed_processed_pseudogene	Gm14125	ENSMUST00000120921	transcribed_processed_pseudogene		2	1	150305761	756
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000128156	protein_coding		2	1	11705369	1624
ENSMUSG00000107550	processed_pseudogene	Gm44726	ENSMUST00000203427	processed_pseudogene		6	-1	132384044	217
ENSMUSG00000030590	protein_coding	Fam98c	ENSMUST00000153251	protein_coding		7	-1	29155719	791
ENSMUSG00000107805	processed_pseudogene	Gm44003	ENSMUST00000203024	processed_pseudogene		6	-1	132389375	490
ENSMUSG00000028528	protein_coding	Dnajc6	ENSMUST00000154120	protein_coding		4	1	101496631	1569
ENSMUSG00000108041	unprocessed_pseudogene	Gm5154	ENSMUST00000203971	unprocessed_pseudogene		6	-1	132441722	399
ENSMUSG00000108002	processed_pseudogene	Gm45063	ENSMUST00000203726	processed_pseudogene		6	-1	132462973	472
ENSMUSG00000107731	processed_pseudogene	Gm44952	ENSMUST00000204443	processed_pseudogene		6	-1	132473770	433
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000133710	retained_intron		7	1	67647410	3627
ENSMUSG00000107632	TEC	Gm44070	ENSMUST00000203389	TEC		6	1	132525033	2220
ENSMUSG00000030590	protein_coding	Fam98c	ENSMUST00000123416	protein_coding		7	-1	29155603	405
ENSMUSG00000063364	protein_coding	3300002I08Rik	ENSMUST00000051153	protein_coding	principal1	2	-1	150362765	650
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000130245	retained_intron		2	1	11705375	507
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000142306	processed_transcript		3	1	95160457	450
ENSMUSG00000081663	processed_pseudogene	Gm11207	ENSMUST00000117824	processed_pseudogene		11	-1	80823193	414
ENSMUSG00000030590	protein_coding	Fam98c	ENSMUST00000138084	processed_transcript		7	-1	29156203	781
ENSMUSG00000016534	protein_coding	Lamp2	ENSMUST00000061755	protein_coding	principal5	X	-1	38456454	3604
ENSMUSG00000063364	protein_coding	3300002I08Rik	ENSMUST00000124945	processed_transcript		2	-1	150362733	555
ENSMUSG00000041079	protein_coding	Rwdd2b	ENSMUST00000039101	protein_coding	principal1	16	-1	87440573	2009
ENSMUSG00000063364	protein_coding	3300002I08Rik	ENSMUST00000152036	processed_transcript		2	-1	150362742	745
ENSMUSG00000086703	antisense	4930507D10Rik	ENSMUST00000137411	antisense		11	-1	80858300	1152
ENSMUSG00000063364	protein_coding	3300002I08Rik	ENSMUST00000138130	processed_transcript		2	-1	150362744	1410
ENSMUSG00000026019	protein_coding	Wdr12	ENSMUST00000122038	protein_coding	principal1	1	-1	60098146	2850
ENSMUSG00000095315	protein_coding	Gm10130	ENSMUST00000238230	protein_coding	principal1	2	1	150311431	2159
ENSMUSG00000041079	protein_coding	Rwdd2b	ENSMUST00000152430	processed_transcript		16	-1	87440573	377
ENSMUSG00000038623	protein_coding	Tm6sf1	ENSMUST00000124616	retained_intron		7	1	81859020	3419
ENSMUSG00000041180	protein_coding	Hectd2	ENSMUST00000139215	nonsense_mediated_decay		19	1	36554639	4585
ENSMUSG00000095315	protein_coding	Gm10130	ENSMUST00000133235	protein_coding		2	1	150323702	303
ENSMUSG00000041079	protein_coding	Rwdd2b	ENSMUST00000231843	retained_intron		16	-1	87440561	2033
ENSMUSG00000111305	unprocessed_pseudogene	Olfr966-ps1	ENSMUST00000214875	unprocessed_pseudogene		9	1	39723965	577
ENSMUSG00000016534	protein_coding	Lamp2	ENSMUST00000136817	retained_intron		X	-1	38443150	2870
ENSMUSG00000038623	protein_coding	Tm6sf1	ENSMUST00000147977	retained_intron		7	1	81869733	2094
ENSMUSG00000018428	protein_coding	Akap1	ENSMUST00000143720	nonsense_mediated_decay		11	-1	88851503	3828
ENSMUSG00000016534	protein_coding	Lamp2	ENSMUST00000144663	processed_transcript		X	-1	38456414	2633
ENSMUSG00000031672	protein_coding	Got2	ENSMUST00000034097	protein_coding	principal1	8	-1	95888547	2530
ENSMUSG00000094353	protein_coding	Olfr150	ENSMUST00000217257	protein_coding	principal1	9	1	39730978	1867
ENSMUSG00000038623	protein_coding	Tm6sf1	ENSMUST00000119543	protein_coding		7	1	81862687	1066
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000130814	processed_transcript		3	1	95160494	347
ENSMUSG00000026019	protein_coding	Wdr12	ENSMUST00000117438	protein_coding	principal1	1	-1	60098645	3251
ENSMUSG00000059934	protein_coding	Prh1	ENSMUST00000177523	protein_coding	principal2	6	1	132569809	993
ENSMUSG00000038623	protein_coding	Tm6sf1	ENSMUST00000134861	processed_transcript		7	1	81859118	679
ENSMUSG00000085207	antisense	Gm11767	ENSMUST00000129379	antisense		11	-1	119942698	493
ENSMUSG00000018428	protein_coding	Akap1	ENSMUST00000018572	protein_coding	principal2	11	-1	88864586	3758
ENSMUSG00000094353	protein_coding	Olfr150	ENSMUST00000078557	protein_coding	principal1	9	1	39736817	939
ENSMUSG00000031294	lincRNA	D630029K05Rik	ENSMUST00000176050	lincRNA		10	1	116964707	457
ENSMUSG00000031672	protein_coding	Got2	ENSMUST00000211836	processed_transcript		8	-1	95868045	704
ENSMUSG00000059934	protein_coding	Prh1	ENSMUST00000111972	protein_coding	principal2	6	1	132569842	870
ENSMUSG00000031672	protein_coding	Got2	ENSMUST00000147040	retained_intron		8	-1	95872392	639
ENSMUSG00000038623	protein_coding	Tm6sf1	ENSMUST00000130006	retained_intron		7	1	81873493	750
ENSMUSG00000026019	protein_coding	Wdr12	ENSMUST00000147413	retained_intron		1	-1	60085762	808
ENSMUSG00000018428	protein_coding	Akap1	ENSMUST00000107904	protein_coding	alternative2	11	-1	88863717	2673
ENSMUSG00000086924	lincRNA	Gm11766	ENSMUST00000143428	lincRNA		11	1	119938511	3018
ENSMUSG00000031672	protein_coding	Got2	ENSMUST00000212861	retained_intron		8	-1	95888392	2057
ENSMUSG00000109090	TEC	Gm45088	ENSMUST00000207066	TEC		7	-1	81920350	1408
ENSMUSG00000059934	protein_coding	Prh1	ENSMUST00000074042	protein_coding	alternative2	6	1	132569809	819
ENSMUSG00000018428	protein_coding	Akap1	ENSMUST00000153961	retained_intron		11	-1	88841540	805
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000034046	protein_coding	principal2	8	1	46471037	3897
ENSMUSG00000109243	TEC	Gm45867	ENSMUST00000208201	TEC		7	1	81874204	2317
ENSMUSG00000026019	protein_coding	Wdr12	ENSMUST00000136461	processed_transcript		1	-1	60085939	275
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000128519	retained_intron		11	-1	69672317	1845
ENSMUSG00000026019	protein_coding	Wdr12	ENSMUST00000143342	protein_coding		1	-1	60098125	770
ENSMUSG00000018428	protein_coding	Akap1	ENSMUST00000153787	nonsense_mediated_decay		11	-1	88844498	760
ENSMUSG00000026019	protein_coding	Wdr12	ENSMUST00000141417	protein_coding		1	-1	60098135	720
ENSMUSG00000031294	lincRNA	D630029K05Rik	ENSMUST00000176455	lincRNA		10	1	116964740	720
ENSMUSG00000031294	lincRNA	D630029K05Rik	ENSMUST00000176045	lincRNA		10	1	116965755	907
ENSMUSG00000026019	protein_coding	Wdr12	ENSMUST00000133767	retained_intron		1	-1	60097697	720
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000123995	retained_intron		11	-1	69672317	3167
ENSMUSG00000042423	protein_coding	Fbrs	ENSMUST00000205432	protein_coding	alternative2	7	1	127479199	4166
ENSMUSG00000082609	processed_pseudogene	Gm15464	ENSMUST00000118718	processed_pseudogene		1	1	60117255	431
ENSMUSG00000031294	lincRNA	D630029K05Rik	ENSMUST00000033651	lincRNA		10	1	116966274	2133
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000142348	processed_transcript		11	-1	69668237	855
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000128746	retained_intron		8	1	46471055	5676
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000140186	processed_transcript		11	-1	69668063	435
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000211644	protein_coding		8	1	46471072	343
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000191662	processed_transcript		2	1	11705387	1408
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000133067	processed_transcript		11	-1	69668289	753
ENSMUSG00000042423	protein_coding	Fbrs	ENSMUST00000206394	protein_coding	alternative2	7	1	127479592	2961
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000211289	retained_intron		8	1	46471177	1253
ENSMUSG00000042423	protein_coding	Fbrs	ENSMUST00000206980	processed_transcript		7	1	127480015	517
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000102589	nonsense_mediated_decay		11	-1	69672423	813
ENSMUSG00000040511	protein_coding	Pvr	ENSMUST00000043517	protein_coding	principal1	7	-1	19921160	2905
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000139299	processed_transcript		11	-1	69672316	403
ENSMUSG00000027562	protein_coding	Car2	ENSMUST00000192609	protein_coding		3	1	14886273	587
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000140310	processed_transcript		11	-1	69670883	493
ENSMUSG00000040511	protein_coding	Pvr	ENSMUST00000159413	retained_intron		7	-1	19910864	540
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000135955	protein_coding		8	1	46471177	673
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000148748	protein_coding		2	1	11705443	1542
ENSMUSG00000032121	protein_coding	Tmem218	ENSMUST00000034632	protein_coding	principal1	9	1	37208223	2619
ENSMUSG00000040511	protein_coding	Pvr	ENSMUST00000208861	retained_intron		7	-1	19914762	739
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000142214	processed_transcript		11	-1	69672315	484
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000210929	processed_transcript		8	1	46471183	474
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000117633	protein_coding	alternative2	16	1	91647506	8731
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000127677	processed_transcript		11	-1	69671730	401
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000126394	processed_transcript		2	1	11705552	583
ENSMUSG00000060371	protein_coding	Caln1	ENSMUST00000086029	protein_coding	alternative1	5	1	130369455	1801
ENSMUSG00000042423	protein_coding	Fbrs	ENSMUST00000205696	retained_intron		7	1	127485408	830
ENSMUSG00000040511	protein_coding	Pvr	ENSMUST00000160572	retained_intron		7	-1	19921113	1916
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000145289	retained_intron		11	-1	69671222	453
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000110372	protein_coding	principal2	8	1	46490966	3429
ENSMUSG00000040511	protein_coding	Pvr	ENSMUST00000159261	retained_intron		7	-1	19921113	1794
ENSMUSG00000041763	protein_coding	Tpp2	ENSMUST00000185579	processed_transcript		1	1	43933647	450
ENSMUSG00000042423	protein_coding	Fbrs	ENSMUST00000205803	protein_coding	alternative2	7	1	127485641	761
ENSMUSG00000059796	protein_coding	Eif4a1	ENSMUST00000129295	retained_intron		11	-1	69671450	802
ENSMUSG00000060371	protein_coding	Caln1	ENSMUST00000202728	protein_coding		5	1	130384697	430
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000138856	protein_coding		2	1	11705712	405
ENSMUSG00000026787	protein_coding	Gad2	ENSMUST00000028123	protein_coding	principal1	2	1	22622205	5744
ENSMUSG00000042423	protein_coding	Fbrs	ENSMUST00000206484	protein_coding		7	1	127485647	1090
ENSMUSG00000103158	lincRNA	Gm31925	ENSMUST00000193561	lincRNA		1	1	161890458	600
ENSMUSG00000107882	lincRNA	Gm44278	ENSMUST00000204082	lincRNA		6	-1	91120935	312
ENSMUSG00000103158	lincRNA	Gm31925	ENSMUST00000194266	lincRNA		1	1	161892147	537
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000130563	protein_coding		8	1	46490974	368
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000124448	retained_intron		2	1	11705759	2315
ENSMUSG00000042423	protein_coding	Fbrs	ENSMUST00000205651	retained_intron		7	1	127486849	2627
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000119368	protein_coding		16	1	91647879	7529
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000110371	protein_coding	alternative1	8	1	46492832	2100
ENSMUSG00000042423	protein_coding	Fbrs	ENSMUST00000205967	retained_intron		7	1	127487063	563
ENSMUSG00000026787	protein_coding	Gad2	ENSMUST00000156728	processed_transcript		2	1	22623304	721
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000133161	retained_intron		8	1	46526786	573
ENSMUSG00000042423	protein_coding	Fbrs	ENSMUST00000048896	protein_coding	principal2	7	1	127485221	2650
ENSMUSG00000081539	processed_pseudogene	Gm11990	ENSMUST00000121505	processed_pseudogene		11	-1	8806848	897
ENSMUSG00000018796	protein_coding	Acsl1	ENSMUST00000152423	protein_coding		8	1	46531064	441
ENSMUSG00000109807	TEC	Gm45244	ENSMUST00000211328	TEC		8	-1	46473590	2200
ENSMUSG00000031688	protein_coding	Pou4f2	ENSMUST00000034115	protein_coding	principal1	8	-1	78436645	3204
ENSMUSG00000064373	protein_coding	Selenop	ENSMUST00000160787	protein_coding		15	1	3268547	768
ENSMUSG00000105472	sense_intronic	Gm43024	ENSMUST00000196770	sense_intronic		3	1	99144603	4352
ENSMUSG00000110057	processed_pseudogene	Gm2225	ENSMUST00000209570	processed_pseudogene		8	-1	78486410	377
ENSMUSG00000064373	protein_coding	Selenop	ENSMUST00000159158	protein_coding		15	1	3270811	527
ENSMUSG00000064181	protein_coding	Rab3ip	ENSMUST00000020375	protein_coding		10	-1	116950380	2690
ENSMUSG00000027562	protein_coding	Car2	ENSMUST00000029078	protein_coding	principal1	3	1	14886428	1788
ENSMUSG00000040713	protein_coding	Creg1	ENSMUST00000111432	protein_coding	principal1	1	1	165763746	2163
ENSMUSG00000060371	protein_coding	Caln1	ENSMUST00000141131	protein_coding		5	1	130447449	661
ENSMUSG00000027562	protein_coding	Car2	ENSMUST00000195520	retained_intron		3	1	14886639	881
ENSMUSG00000044719	protein_coding	E230025N22Rik	ENSMUST00000115682	protein_coding	principal1	18	-1	36695925	2016
ENSMUSG00000064181	protein_coding	Rab3ip	ENSMUST00000219109	protein_coding	principal1	10	-1	116950431	1844
ENSMUSG00000060371	protein_coding	Caln1	ENSMUST00000111287	protein_coding	principal3	5	1	130448012	2106
ENSMUSG00000064181	protein_coding	Rab3ip	ENSMUST00000219570	retained_intron		10	-1	116919933	597
ENSMUSG00000044719	protein_coding	E230025N22Rik	ENSMUST00000235134	retained_intron		18	-1	36693573	1641
ENSMUSG00000064373	protein_coding	Selenop	ENSMUST00000159216	protein_coding	principal1	15	1	3270921	2085
ENSMUSG00000040713	protein_coding	Creg1	ENSMUST00000140769	nonsense_mediated_decay		1	1	165763746	2317
ENSMUSG00000025104	protein_coding	Hdgfl3	ENSMUST00000107305	protein_coding	principal2	7	-1	81934473	5887
ENSMUSG00000110846	processed_pseudogene	Gm18508	ENSMUST00000215790	processed_pseudogene		10	-1	28990440	1642
ENSMUSG00000064181	protein_coding	Rab3ip	ENSMUST00000219603	protein_coding		10	-1	116950769	511
ENSMUSG00000037070	protein_coding	Rbmxl1	ENSMUST00000049245	protein_coding	principal1	8	-1	78508898	1695
ENSMUSG00000040713	protein_coding	Creg1	ENSMUST00000040298	protein_coding		1	1	165769476	425
ENSMUSG00000083077	processed_pseudogene	Gm14126	ENSMUST00000122345	processed_pseudogene		2	-1	150379272	395
ENSMUSG00000025104	protein_coding	Hdgfl3	ENSMUST00000026094	protein_coding	alternative1	7	-1	81934459	2865
ENSMUSG00000019718	protein_coding	L3hypdh	ENSMUST00000019862	protein_coding	principal1	12	-1	72085439	1831
ENSMUSG00000064181	protein_coding	Rab3ip	ENSMUST00000218391	protein_coding		10	-1	116950453	416
ENSMUSG00000037070	protein_coding	Rbmxl1	ENSMUST00000211719	protein_coding	principal1	8	-1	78508879	1622
ENSMUSG00000025104	protein_coding	Hdgfl3	ENSMUST00000149288	retained_intron		7	-1	81934023	2320
ENSMUSG00000064373	protein_coding	Selenop	ENSMUST00000160311	protein_coding		15	1	3270998	420
ENSMUSG00000064373	protein_coding	Selenop	ENSMUST00000159247	retained_intron		15	1	3270999	516
ENSMUSG00000026017	protein_coding	Carf	ENSMUST00000130075	nonsense_mediated_decay		1	1	60098247	2763
ENSMUSG00000019718	protein_coding	L3hypdh	ENSMUST00000124405	retained_intron		12	-1	72085439	1952
ENSMUSG00000019718	protein_coding	L3hypdh	ENSMUST00000138029	processed_transcript		12	-1	72085018	799
ENSMUSG00000064373	protein_coding	Selenop	ENSMUST00000160930	protein_coding		15	1	3272085	627
ENSMUSG00000026417	protein_coding	Pigr	ENSMUST00000027675	protein_coding	principal1	1	1	130826684	3849
ENSMUSG00000064373	protein_coding	Selenop	ENSMUST00000082424	protein_coding	principal1	15	1	3270767	2013
ENSMUSG00000078480	processed_pseudogene	Mrpl48-ps	ENSMUST00000121413	processed_pseudogene		4	-1	88599810	636
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000140312	nonsense_mediated_decay		16	1	91647879	8426
ENSMUSG00000026017	protein_coding	Carf	ENSMUST00000150008	retained_intron		1	1	60098264	3795
ENSMUSG00000060371	protein_coding	Caln1	ENSMUST00000111288	protein_coding	principal3	5	1	130448801	9327
ENSMUSG00000026017	protein_coding	Carf	ENSMUST00000124986	protein_coding		1	1	60098264	410
ENSMUSG00000026417	protein_coding	Pigr	ENSMUST00000133792	protein_coding		1	1	130826888	784
ENSMUSG00000073811	protein_coding	Ifna12	ENSMUST00000102806	protein_coding	principal1	4	-1	88603376	797
ENSMUSG00000026017	protein_coding	Carf	ENSMUST00000191232	retained_intron		1	1	60101246	3235
ENSMUSG00000026417	protein_coding	Pigr	ENSMUST00000137782	protein_coding		1	1	130829010	740
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000114037	protein_coding	principal2	16	1	91647879	8399
ENSMUSG00000112909	processed_pseudogene	Gm10120	ENSMUST00000219845	processed_pseudogene		10	1	128011776	357
ENSMUSG00000052014	protein_coding	A330070K13Rik	ENSMUST00000200886	antisense		5	-1	130384630	705
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000131620	nonsense_mediated_decay		3	1	95160494	716
ENSMUSG00000052014	protein_coding	A330070K13Rik	ENSMUST00000063656	protein_coding	principal1	5	-1	130384631	633
ENSMUSG00000045996	protein_coding	Polr2k	ENSMUST00000180159	protein_coding	principal1	15	1	36174010	489
ENSMUSG00000000126	protein_coding	Wnt9a	ENSMUST00000000128	protein_coding	alternative1	11	1	59306928	3320
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000114036	protein_coding		16	1	91647880	7945
ENSMUSG00000026895	protein_coding	Ndufa8	ENSMUST00000070112	protein_coding	principal1	2	-1	36049406	861
ENSMUSG00000022360	protein_coding	Atad2	ENSMUST00000226649	retained_intron		15	-1	58098776	2209
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000122302	protein_coding		16	1	91647885	2449
ENSMUSG00000000126	protein_coding	Wnt9a	ENSMUST00000108783	protein_coding	principal2	11	1	59306930	3318
ENSMUSG00000083958	unprocessed_pseudogene	Gm12601	ENSMUST00000118994	unprocessed_pseudogene		4	-1	88614044	846
ENSMUSG00000006169	protein_coding	Clint1	ENSMUST00000109261	protein_coding	alternative1	11	1	45851964	3452
ENSMUSG00000091119	protein_coding	Ccdc152	ENSMUST00000226261	protein_coding	principal1	15	-1	3301196	1327
ENSMUSG00000073723	protein_coding	Gm13102	ENSMUST00000097800	protein_coding	alternative2	4	1	144106474	2293
ENSMUSG00000091119	protein_coding	Ccdc152	ENSMUST00000228405	protein_coding		15	-1	3301196	494
ENSMUSG00000073723	protein_coding	Gm13102	ENSMUST00000097799	protein_coding	alternative2	4	1	144106474	2338
ENSMUSG00000073723	protein_coding	Gm13102	ENSMUST00000105761	protein_coding	principal2	4	1	144106531	2281
ENSMUSG00000045996	protein_coding	Polr2k	ENSMUST00000057177	protein_coding		15	1	36174033	601
ENSMUSG00000039262	protein_coding	Prrc2b	ENSMUST00000036691	protein_coding	principal3	2	1	32151082	8612
ENSMUSG00000091119	protein_coding	Ccdc152	ENSMUST00000165386	protein_coding	principal1	15	-1	3303526	798
ENSMUSG00000108461	bidirectional_promoter_lncRNA	AV356131	ENSMUST00000206201	bidirectional_promoter_lncRNA		7	1	116443575	750
ENSMUSG00000006169	protein_coding	Clint1	ENSMUST00000109260	protein_coding	principal3	11	1	45851964	3398
ENSMUSG00000058295	protein_coding	Prp2	ENSMUST00000076061	protein_coding	principal1	6	1	132595913	1074
ENSMUSG00000049291	protein_coding	Prss38	ENSMUST00000061481	protein_coding	principal1	11	-1	59375657	1243
ENSMUSG00000011179	protein_coding	Odc1	ENSMUST00000171737	protein_coding	principal1	12	1	17544794	2208
ENSMUSG00000058295	protein_coding	Prp2	ENSMUST00000178961	protein_coding	principal1	6	1	132595946	951
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000147891	nonsense_mediated_decay		16	1	91659943	5547
ENSMUSG00000086910	antisense	Gm15755	ENSMUST00000133698	antisense		11	1	59375461	659
ENSMUSG00000006169	protein_coding	Clint1	ENSMUST00000133715	processed_transcript		11	1	45882397	6729
ENSMUSG00000107931	processed_pseudogene	Gm44475	ENSMUST00000204041	processed_pseudogene		6	-1	73310641	424
ENSMUSG00000023926	protein_coding	Rhag	ENSMUST00000024721	protein_coding	principal2	17	1	40811126	2339
ENSMUSG00000097271	protein_coding	Gm9903	ENSMUST00000181102	protein_coding	principal1	5	1	33629925	1747
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000133589	processed_transcript		16	1	91664220	736
ENSMUSG00000109319	unprocessed_pseudogene	Olfr1482-ps1	ENSMUST00000207181	unprocessed_pseudogene		19	-1	13563213	178
ENSMUSG00000023926	protein_coding	Rhag	ENSMUST00000233740	protein_coding	alternative2	17	1	40811149	1590
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000129167	processed_transcript		16	1	91671349	657
ENSMUSG00000067541	protein_coding	A630073D07Rik	ENSMUST00000203888	processed_transcript		6	-1	132627459	501
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000232108	retained_intron		16	1	91672263	3808
ENSMUSG00000023926	protein_coding	Rhag	ENSMUST00000233619	nonsense_mediated_decay		17	1	40811184	386
ENSMUSG00000011179	protein_coding	Odc1	ENSMUST00000222617	nonsense_mediated_decay		12	1	17544972	1884
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000147461	processed_transcript		16	1	91673441	700
ENSMUSG00000085286	antisense	Ube4bos3	ENSMUST00000155845	antisense		4	1	149334639	756
ENSMUSG00000028757	protein_coding	Ddost	ENSMUST00000030538	protein_coding	principal1	4	1	138304730	2120
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000078834	protein_coding	principal3	2	1	11705777	1600
ENSMUSG00000029163	protein_coding	Emilin1	ENSMUST00000031055	protein_coding	principal1	5	1	30913402	3852
ENSMUSG00000011179	protein_coding	Odc1	ENSMUST00000221701	retained_intron		12	1	17547147	472
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000145235	processed_transcript		16	1	91673671	598
ENSMUSG00000085807	antisense	Ube4bos2	ENSMUST00000154000	antisense		4	1	149338087	317
ENSMUSG00000067541	protein_coding	A630073D07Rik	ENSMUST00000091791	protein_coding	principal1	6	-1	132627511	484
ENSMUSG00000011179	protein_coding	Odc1	ENSMUST00000220947	retained_intron		12	1	17547250	504
ENSMUSG00000055820	protein_coding	Olfr967	ENSMUST00000213358	protein_coding	principal1	9	1	39746249	1210
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000146079	processed_transcript		16	1	91674107	799
ENSMUSG00000011179	protein_coding	Odc1	ENSMUST00000221613	nonsense_mediated_decay		12	1	17547689	1982
ENSMUSG00000022961	protein_coding	Son	ENSMUST00000151503	retained_intron		16	1	91674932	647
ENSMUSG00000114937	antisense	Gm30054	ENSMUST00000225363	antisense		14	-1	20378876	1899
ENSMUSG00000055820	protein_coding	Olfr967	ENSMUST00000069561	protein_coding	principal1	9	1	39750388	933
ENSMUSG00000085819	antisense	Ube4bos1	ENSMUST00000151896	antisense		4	1	149347885	1286
ENSMUSG00000098008	lincRNA	A930001A20Rik	ENSMUST00000182586	lincRNA		3	1	14971201	1366
ENSMUSG00000011179	protein_coding	Odc1	ENSMUST00000220849	retained_intron		12	1	17547817	764
ENSMUSG00000098186	processed_pseudogene	Gm7132	ENSMUST00000182302	processed_pseudogene		3	-1	14974552	984
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000114834	protein_coding	alternative2	2	1	11705810	784
ENSMUSG00000026894	protein_coding	Morn5	ENSMUST00000028256	protein_coding	principal1	2	1	36049458	714
ENSMUSG00000011179	protein_coding	Odc1	ENSMUST00000221354	retained_intron		12	1	17548640	561
ENSMUSG00000029163	protein_coding	Emilin1	ENSMUST00000201169	retained_intron		5	1	30913739	3841
ENSMUSG00000085819	antisense	Ube4bos1	ENSMUST00000141259	antisense		4	1	149347914	2227
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000114833	protein_coding		2	1	11705810	1607
ENSMUSG00000011179	protein_coding	Odc1	ENSMUST00000222250	retained_intron		12	1	17549458	538
ENSMUSG00000083964	processed_pseudogene	Gm14122	ENSMUST00000122076	processed_pseudogene		2	-1	150399399	973
ENSMUSG00000067541	protein_coding	A630073D07Rik	ENSMUST00000205081	processed_transcript		6	-1	132651526	1049
ENSMUSG00000029163	protein_coding	Emilin1	ENSMUST00000202368	retained_intron		5	1	30919921	601
ENSMUSG00000107351	TEC	Gm43764	ENSMUST00000202553	TEC		2	-1	36069289	3172
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000114831	protein_coding	alternative2	2	1	11705811	882
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000114832	protein_coding		2	1	11705848	468
ENSMUSG00000095903	protein_coding	Olfr968	ENSMUST00000216458	protein_coding	principal1	9	-1	39783253	4630
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000133975	retained_intron		2	1	11718327	406
ENSMUSG00000095903	protein_coding	Olfr968	ENSMUST00000075928	protein_coding	principal1	9	-1	39772798	1027
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000123600	protein_coding		2	1	11718431	767
ENSMUSG00000023206	protein_coding	Il15ra	ENSMUST00000139774	retained_intron		2	1	11723164	1375
ENSMUSG00000029711	protein_coding	Epo	ENSMUST00000031723	protein_coding	principal3	5	-1	137485816	715
ENSMUSG00000004233	protein_coding	Wars2	ENSMUST00000004343	protein_coding	principal1	3	1	99141068	4410
ENSMUSG00000097387	bidirectional_promoter_lncRNA	4930563E18Rik	ENSMUST00000180948	bidirectional_promoter_lncRNA		18	1	10706860	1553
ENSMUSG00000068130	protein_coding	Zfp442	ENSMUST00000109916	protein_coding	principal1	2	-1	150451486	2922
ENSMUSG00000051439	protein_coding	Cd14	ENSMUST00000061829	protein_coding	principal1	18	-1	36726798	1641
ENSMUSG00000006021	protein_coding	Kptn	ENSMUST00000130170	retained_intron		7	1	16119895	1322
ENSMUSG00000029711	protein_coding	Epo	ENSMUST00000111038	protein_coding	principal3	5	-1	137533242	855
ENSMUSG00000085624	antisense	Gm14573	ENSMUST00000150544	antisense		6	-1	91159256	451
ENSMUSG00000004233	protein_coding	Wars2	ENSMUST00000135960	nonsense_mediated_decay		3	1	99141072	3457
ENSMUSG00000068130	protein_coding	Zfp442	ENSMUST00000185796	protein_coding		2	-1	150411337	1833
ENSMUSG00000029711	protein_coding	Epo	ENSMUST00000111039	protein_coding	alternative2	5	-1	137485816	706
ENSMUSG00000101987	unprocessed_pseudogene	Gm21268	ENSMUST00000185646	unprocessed_pseudogene		Y	-1	53051486	696
ENSMUSG00000100072	unprocessed_pseudogene	Gm21275	ENSMUST00000185958	unprocessed_pseudogene		Y	-1	53126206	696
ENSMUSG00000108158	TEC	Gm44002	ENSMUST00000205134	TEC		6	-1	91174018	594
ENSMUSG00000051439	protein_coding	Cd14	ENSMUST00000237042	retained_intron		18	-1	36726738	868
ENSMUSG00000039262	protein_coding	Prrc2b	ENSMUST00000069817	protein_coding	alternative2	2	1	32151148	10671
ENSMUSG00000101570	lincRNA	Gm28233	ENSMUST00000189360	lincRNA		Y	1	53142435	356
ENSMUSG00000004233	protein_coding	Wars2	ENSMUST00000145650	nonsense_mediated_decay		3	1	99141093	1840
ENSMUSG00000101885	lincRNA	Gm28235	ENSMUST00000185828	lincRNA		Y	-1	53148054	1120
ENSMUSG00000004233	protein_coding	Wars2	ENSMUST00000198044	protein_coding		3	1	99141096	403
ENSMUSG00000100095	unprocessed_pseudogene	Gm28234	ENSMUST00000185657	unprocessed_pseudogene		Y	-1	53155705	615
ENSMUSG00000105986	sense_intronic	Gm43065	ENSMUST00000198971	sense_intronic		3	1	103864706	2092
ENSMUSG00000004233	protein_coding	Wars2	ENSMUST00000126875	retained_intron		3	1	99141165	666
ENSMUSG00000056673	protein_coding	Kdm5d	ENSMUST00000189069	protein_coding		Y	1	897788	2177
ENSMUSG00000106197	sense_intronic	Gm42717	ENSMUST00000197309	sense_intronic		3	1	99206422	3463
ENSMUSG00000101420	unprocessed_pseudogene	Gm21902	ENSMUST00000190361	unprocessed_pseudogene		Y	-1	53192541	696
ENSMUSG00000105798	processed_pseudogene	Gm18982	ENSMUST00000198118	processed_pseudogene		3	-1	99181281	529
ENSMUSG00000039262	protein_coding	Prrc2b	ENSMUST00000132459	protein_coding		2	1	32183226	4837
ENSMUSG00000099654	lincRNA	Gm28236	ENSMUST00000188311	lincRNA		Y	1	53234010	1499
ENSMUSG00000006717	protein_coding	Acot13	ENSMUST00000006900	protein_coding	principal1	13	-1	24831517	721
ENSMUSG00000052974	protein_coding	Cyp2f2	ENSMUST00000003100	protein_coding	principal1	7	1	27119909	1866
ENSMUSG00000039262	protein_coding	Prrc2b	ENSMUST00000123270	processed_transcript		2	1	32206383	1258
ENSMUSG00000099654	lincRNA	Gm28236	ENSMUST00000186873	lincRNA		Y	1	53234463	439
ENSMUSG00000099654	lincRNA	Gm28236	ENSMUST00000185554	lincRNA		Y	1	53234463	622
ENSMUSG00000006717	protein_coding	Acot13	ENSMUST00000224839	processed_transcript		13	-1	24831540	148
ENSMUSG00000039262	protein_coding	Prrc2b	ENSMUST00000156313	protein_coding		2	1	32212198	751
ENSMUSG00000053184	protein_coding	Spaca3	ENSMUST00000103223	protein_coding	principal1	11	1	80858365	947
ENSMUSG00000039262	protein_coding	Prrc2b	ENSMUST00000128936	protein_coding		2	1	32216078	696
ENSMUSG00000100834	unprocessed_pseudogene	Gm21285	ENSMUST00000191214	unprocessed_pseudogene		Y	-1	53342254	693
ENSMUSG00000039262	protein_coding	Prrc2b	ENSMUST00000142219	processed_transcript		2	1	32217212	604
ENSMUSG00000052974	protein_coding	Cyp2f2	ENSMUST00000133841	processed_transcript		7	1	27119961	718
ENSMUSG00000111542	unprocessed_pseudogene	Gm30619	ENSMUST00000213962	unprocessed_pseudogene		10	-1	29035453	686
ENSMUSG00000095478	processed_pseudogene	Gm9824	ENSMUST00000178707	processed_pseudogene		10	1	29030128	561
ENSMUSG00000052974	protein_coding	Cyp2f2	ENSMUST00000206552	protein_coding		7	1	27121892	626
ENSMUSG00000028528	protein_coding	Dnajc6	ENSMUST00000106930	protein_coding	principal3	4	1	101496648	5127
ENSMUSG00000094729	protein_coding	Gm20747	ENSMUST00000187856	protein_coding	principal1	Y	-1	53418291	1223
ENSMUSG00000029714	protein_coding	Gigyf1	ENSMUST00000197624	protein_coding		5	1	137518548	827
ENSMUSG00000028528	protein_coding	Dnajc6	ENSMUST00000038207	protein_coding	alternative2	4	1	101507871	5258
ENSMUSG00000094729	protein_coding	Gm20747	ENSMUST00000179137	protein_coding	principal1	Y	-1	53416775	684
ENSMUSG00000086868	antisense	Gm15883	ENSMUST00000153562	antisense		7	-1	27130674	1690
ENSMUSG00000039262	protein_coding	Prrc2b	ENSMUST00000140015	processed_transcript		2	1	32217280	737
ENSMUSG00000053184	protein_coding	Spaca3	ENSMUST00000103222	protein_coding	principal1	11	1	80858372	831
ENSMUSG00000108974	unprocessed_pseudogene	Olfr1483-ps1	ENSMUST00000208241	unprocessed_pseudogene		19	1	13566801	334
ENSMUSG00000100332	lincRNA	Gm29250	ENSMUST00000191372	lincRNA		Y	1	53435828	368
ENSMUSG00000100678	unprocessed_pseudogene	Gm29251	ENSMUST00000191480	unprocessed_pseudogene		Y	-1	53449147	615
ENSMUSG00000028528	protein_coding	Dnajc6	ENSMUST00000149047	protein_coding		4	1	101507976	872
ENSMUSG00000039262	protein_coding	Prrc2b	ENSMUST00000129626	processed_transcript		2	1	32219530	623
ENSMUSG00000028528	protein_coding	Dnajc6	ENSMUST00000146489	processed_transcript		4	1	101508030	458
ENSMUSG00000036686	protein_coding	Cc2d1a	ENSMUST00000117424	protein_coding	alternative2	8	-1	84147865	3262
ENSMUSG00000039262	protein_coding	Prrc2b	ENSMUST00000141053	processed_transcript		2	1	32219768	383
ENSMUSG00000051329	protein_coding	Nup160	ENSMUST00000057481	protein_coding	principal1	2	1	90677215	5684
ENSMUSG00000022956	protein_coding	Atp5o	ENSMUST00000023677	protein_coding	principal1	16	-1	91931687	838
ENSMUSG00000100507	unprocessed_pseudogene	Gm21906	ENSMUST00000189760	unprocessed_pseudogene		Y	-1	53486073	696
ENSMUSG00000028528	protein_coding	Dnajc6	ENSMUST00000094953	protein_coding	principal3	4	1	101550480	5322
ENSMUSG00000070983	protein_coding	Olfr270	ENSMUST00000215010	protein_coding	alternative1	4	1	52964547	2502
ENSMUSG00000070983	protein_coding	Olfr270	ENSMUST00000215127	protein_coding	alternative1	4	1	52964564	3145
ENSMUSG00000070983	protein_coding	Olfr270	ENSMUST00000095084	protein_coding	alternative1	4	1	52968055	2204
ENSMUSG00000086216	antisense	Gm13610	ENSMUST00000128298	antisense		2	-1	32236382	951
ENSMUSG00000112441	lincRNA	Gm48898	ENSMUST00000217967	lincRNA		12	-1	8293694	2671
ENSMUSG00000051329	protein_coding	Nup160	ENSMUST00000154036	processed_transcript		2	1	90685171	2673
ENSMUSG00000022956	protein_coding	Atp5o	ENSMUST00000150642	retained_intron		16	-1	91926684	486
ENSMUSG00000022956	protein_coding	Atp5o	ENSMUST00000155452	nonsense_mediated_decay		16	-1	91931546	560
ENSMUSG00000100374	unprocessed_pseudogene	Gm4451	ENSMUST00000186000	unprocessed_pseudogene		7	-1	38367872	1891
ENSMUSG00000070983	protein_coding	Olfr270	ENSMUST00000172257	protein_coding	principal2	4	1	52970629	939
ENSMUSG00000026017	protein_coding	Carf	ENSMUST00000187978	protein_coding	principal3	1	1	60105344	5463
ENSMUSG00000051329	protein_coding	Nup160	ENSMUST00000132595	processed_transcript		2	1	90717559	229
ENSMUSG00000101547	lincRNA	Gm29252	ENSMUST00000189869	lincRNA		Y	-1	53495514	2167
ENSMUSG00000028528	protein_coding	Dnajc6	ENSMUST00000106929	protein_coding	principal3	4	1	101508000	5128
ENSMUSG00000051329	protein_coding	Nup160	ENSMUST00000126503	processed_transcript		2	1	90732724	658
ENSMUSG00000026017	protein_coding	Carf	ENSMUST00000027171	protein_coding	alternative2	1	1	60108102	2102
ENSMUSG00000028528	protein_coding	Dnajc6	ENSMUST00000106933	protein_coding	alternative2	4	1	101550594	5191
ENSMUSG00000036686	protein_coding	Cc2d1a	ENSMUST00000040383	protein_coding	principal2	8	-1	84147936	3471
ENSMUSG00000022956	protein_coding	Atp5o	ENSMUST00000139277	protein_coding		16	-1	91931274	710
ENSMUSG00000026017	protein_coding	Carf	ENSMUST00000186107	nonsense_mediated_decay		1	1	60108102	1837
ENSMUSG00000051329	protein_coding	Nup160	ENSMUST00000145669	processed_transcript		2	1	90689104	762
ENSMUSG00000026017	protein_coding	Carf	ENSMUST00000186779	retained_intron		1	1	60139796	2416
ENSMUSG00000037660	protein_coding	Gdf7	ENSMUST00000220073	protein_coding	alternative2	12	-1	8301954	1399
ENSMUSG00000022956	protein_coding	Atp5o	ENSMUST00000154661	protein_coding		16	-1	91931418	457
ENSMUSG00000026017	protein_coding	Carf	ENSMUST00000132949	nonsense_mediated_decay		1	1	60141448	493
ENSMUSG00000037660	protein_coding	Gdf7	ENSMUST00000037313	protein_coding	principal2	12	-1	8301954	1423
ENSMUSG00000112765	lincRNA	9430078K24Rik	ENSMUST00000218818	lincRNA		12	-1	79924733	1082
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000204709	nonsense_mediated_decay		3	1	95160494	3562
ENSMUSG00000022956	protein_coding	Atp5o	ENSMUST00000132049	retained_intron		16	-1	91931551	932
ENSMUSG00000116933	protein_coding	Atp5o	ENSMUST00000159295	protein_coding	principal1	16	-1	91926982	530
ENSMUSG00000051329	protein_coding	Nup160	ENSMUST00000136739	processed_transcript		2	1	90690093	726
ENSMUSG00000036686	protein_coding	Cc2d1a	ENSMUST00000154029	retained_intron		8	-1	84136788	1521
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000131742	protein_coding		3	1	95160501	549
ENSMUSG00000112765	lincRNA	9430078K24Rik	ENSMUST00000220293	lincRNA		12	-1	79925494	638
ENSMUSG00000036686	protein_coding	Cc2d1a	ENSMUST00000126364	processed_transcript		8	-1	84147897	332
ENSMUSG00000051329	protein_coding	Nup160	ENSMUST00000130629	processed_transcript		2	1	90699741	687
ENSMUSG00000026017	protein_coding	Carf	ENSMUST00000180952	protein_coding	principal3	1	1	60108081	2157
ENSMUSG00000112765	lincRNA	9430078K24Rik	ENSMUST00000219857	lincRNA		12	-1	79936264	348
ENSMUSG00000006021	protein_coding	Kptn	ENSMUST00000006178	protein_coding	principal1	7	1	16119895	1630
ENSMUSG00000097744	lincRNA	D030040B21Rik	ENSMUST00000181371	lincRNA		1	1	16657552	2788
ENSMUSG00000090260	antisense	2810442N19Rik	ENSMUST00000161583	antisense		1	1	162004969	919
ENSMUSG00000090260	antisense	2810442N19Rik	ENSMUST00000160555	antisense		1	1	162005172	440
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000231459	protein_coding		16	-1	91681310	416
ENSMUSG00000006021	protein_coding	Kptn	ENSMUST00000152044	retained_intron		7	1	16119929	597
ENSMUSG00000006021	protein_coding	Kptn	ENSMUST00000149388	retained_intron		7	1	16120219	723
ENSMUSG00000006021	protein_coding	Kptn	ENSMUST00000149255	retained_intron		7	1	16120451	440
ENSMUSG00000089933	processed_pseudogene	Gm16101	ENSMUST00000160695	processed_pseudogene		1	1	162316092	430
ENSMUSG00000006021	protein_coding	Kptn	ENSMUST00000141430	retained_intron		7	1	16122805	426
ENSMUSG00000109659	protein_coding	Olfr605	ENSMUST00000215417	protein_coding	principal1	7	-1	103445439	2921
ENSMUSG00000082889	unprocessed_pseudogene	Cyp4a29-ps1	ENSMUST00000120882	unprocessed_pseudogene		4	1	115175798	171
ENSMUSG00000112646	processed_pseudogene	Gm5654	ENSMUST00000217787	processed_pseudogene		12	-1	79939639	475
ENSMUSG00000029714	protein_coding	Gigyf1	ENSMUST00000031727	protein_coding	principal1	5	1	137518878	5440
ENSMUSG00000100959	processed_pseudogene	Gm7654	ENSMUST00000186738	processed_pseudogene		1	-1	16663662	683
ENSMUSG00000109659	protein_coding	Olfr605	ENSMUST00000080660	protein_coding	principal1	7	-1	103443150	1011
ENSMUSG00000006021	protein_coding	Kptn	ENSMUST00000127584	retained_intron		7	1	16122872	554
ENSMUSG00000118615	unprocessed_pseudogene	AL645473.1	ENSMUST00000239272	unprocessed_pseudogene		4	1	115218616	651
ENSMUSG00000055612	protein_coding	Cdca7	ENSMUST00000102691	protein_coding	principal1	2	1	72476159	2424
ENSMUSG00000006021	protein_coding	Kptn	ENSMUST00000129080	retained_intron		7	1	16125404	863
ENSMUSG00000083453	processed_pseudogene	Gm13338	ENSMUST00000120235	processed_pseudogene		2	1	22713511	361
ENSMUSG00000055612	protein_coding	Cdca7	ENSMUST00000157019	protein_coding		2	1	72476253	614
ENSMUSG00000085353	lincRNA	1700092C17Rik	ENSMUST00000135792	lincRNA		2	1	22755984	424
ENSMUSG00000085353	lincRNA	1700092C17Rik	ENSMUST00000169209	lincRNA		2	1	22761972	270
ENSMUSG00000055612	protein_coding	Cdca7	ENSMUST00000127344	processed_transcript		2	1	72476390	582
ENSMUSG00000055612	protein_coding	Cdca7	ENSMUST00000130730	processed_transcript		2	1	72483564	598
ENSMUSG00000083057	processed_pseudogene	Gm13356	ENSMUST00000121678	processed_pseudogene		2	-1	22763078	335
ENSMUSG00000055612	protein_coding	Cdca7	ENSMUST00000137880	processed_transcript		2	1	72485107	689
ENSMUSG00000107370	TEC	Gm43588	ENSMUST00000201862	TEC		6	1	85632864	2298
ENSMUSG00000006469	protein_coding	Slc34a3	ENSMUST00000006638	protein_coding	principal1	2	-1	25234364	2183
ENSMUSG00000036442	protein_coding	Thap11	ENSMUST00000040445	protein_coding	principal1	8	1	105855132	1819
ENSMUSG00000110586	processed_transcript	4930578M07Rik	ENSMUST00000212850	retained_intron		8	-1	105860314	1012
ENSMUSG00000040009	protein_coding	Gnaz	ENSMUST00000037813	protein_coding	principal1	10	1	74967177	3519
ENSMUSG00000110586	processed_transcript	4930578M07Rik	ENSMUST00000212946	lincRNA		8	-1	105860422	552
ENSMUSG00000059436	protein_coding	Max	ENSMUST00000110395	protein_coding	principal3	12	-1	76962185	1942
ENSMUSG00000040009	protein_coding	Gnaz	ENSMUST00000160421	processed_transcript		10	1	74967209	645
ENSMUSG00000034245	protein_coding	Hdac11	ENSMUST00000041736	protein_coding	principal1	6	1	91156665	2653
ENSMUSG00000056673	protein_coding	Kdm5d	ENSMUST00000055032	protein_coding	principal1	Y	1	897790	7974
ENSMUSG00000029524	protein_coding	Sirt4	ENSMUST00000112067	protein_coding	principal1	5	-1	115484297	1645
ENSMUSG00000057691	protein_coding	Zfp746	ENSMUST00000073124	protein_coding	principal3	6	-1	48086593	3651
ENSMUSG00000040009	protein_coding	Gnaz	ENSMUST00000159991	protein_coding	principal1	10	1	74990841	3331
ENSMUSG00000034245	protein_coding	Hdac11	ENSMUST00000154389	retained_intron		6	1	91156818	738
ENSMUSG00000072582	protein_coding	Ptrh2	ENSMUST00000108022	protein_coding	principal1	11	1	86683985	3038
ENSMUSG00000029524	protein_coding	Sirt4	ENSMUST00000112066	protein_coding	principal1	5	-1	115484725	1794
ENSMUSG00000034245	protein_coding	Hdac11	ENSMUST00000143621	protein_coding		6	1	91156826	536
ENSMUSG00000059436	protein_coding	Max	ENSMUST00000082136	protein_coding	alternative1	12	-1	76962201	1926
ENSMUSG00000072582	protein_coding	Ptrh2	ENSMUST00000108021	protein_coding	principal1	11	1	86683985	3132
ENSMUSG00000029524	protein_coding	Sirt4	ENSMUST00000154729	retained_intron		5	-1	115479938	733
ENSMUSG00000059436	protein_coding	Max	ENSMUST00000218640	protein_coding		12	-1	76962025	752
ENSMUSG00000059436	protein_coding	Max	ENSMUST00000218653	nonsense_mediated_decay		12	-1	76939994	203
ENSMUSG00000034245	protein_coding	Hdac11	ENSMUST00000127768	retained_intron		6	1	91157164	688
ENSMUSG00000024901	protein_coding	Peli3	ENSMUST00000025834	protein_coding	principal1	19	-1	4943127	4110
ENSMUSG00000029524	protein_coding	Sirt4	ENSMUST00000131121	retained_intron		5	-1	115482856	599
ENSMUSG00000073949	protein_coding	Olfr606	ENSMUST00000217250	protein_coding	principal1	7	1	103449046	2313
ENSMUSG00000059436	protein_coding	Max	ENSMUST00000218597	processed_transcript		12	-1	76961921	378
ENSMUSG00000022360	protein_coding	Atad2	ENSMUST00000038194	protein_coding	principal2	15	-1	58135082	5684
ENSMUSG00000059436	protein_coding	Max	ENSMUST00000217914	retained_intron		12	-1	76953169	659
ENSMUSG00000073949	protein_coding	Olfr606	ENSMUST00000214631	protein_coding	principal1	7	1	103449057	2649
ENSMUSG00000034245	protein_coding	Hdac11	ENSMUST00000155007	protein_coding		6	1	91157397	1251
ENSMUSG00000029524	protein_coding	Sirt4	ENSMUST00000148139	processed_transcript		5	-1	115484345	853
ENSMUSG00000057691	protein_coding	Zfp746	ENSMUST00000203609	protein_coding	alternative2	6	-1	48086593	3648
ENSMUSG00000059436	protein_coding	Max	ENSMUST00000219538	processed_transcript		12	-1	76954409	819
ENSMUSG00000024901	protein_coding	Peli3	ENSMUST00000120475	protein_coding		19	-1	4943092	2988
ENSMUSG00000029524	protein_coding	Sirt4	ENSMUST00000127479	retained_intron		5	-1	115484366	692
ENSMUSG00000112008	TEC	Gm47218	ENSMUST00000218256	TEC		12	-1	76941793	1319
ENSMUSG00000057691	protein_coding	Zfp746	ENSMUST00000203033	protein_coding		6	-1	48067360	391
ENSMUSG00000073949	protein_coding	Olfr606	ENSMUST00000098200	protein_coding	principal1	7	1	103451339	960
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000100837	protein_coding	alternative1	14	-1	20794051	3564
ENSMUSG00000034245	protein_coding	Hdac11	ENSMUST00000204776	nonsense_mediated_decay		6	1	91165651	198
ENSMUSG00000022360	protein_coding	Atad2	ENSMUST00000228783	protein_coding	alternative2	15	-1	58119315	3472
ENSMUSG00000024901	protein_coding	Peli3	ENSMUST00000139436	retained_intron		19	-1	4938628	794
ENSMUSG00000057691	protein_coding	Zfp746	ENSMUST00000204771	retained_intron		6	-1	48082278	661
ENSMUSG00000057691	protein_coding	Zfp746	ENSMUST00000203890	retained_intron		6	-1	48085210	3589
ENSMUSG00000056673	protein_coding	Kdm5d	ENSMUST00000188910	retained_intron		Y	1	897793	4354
ENSMUSG00000034245	protein_coding	Hdac11	ENSMUST00000134154	retained_intron		6	1	91171764	815
ENSMUSG00000057691	protein_coding	Zfp746	ENSMUST00000203994	retained_intron		6	-1	48086546	1311
ENSMUSG00000024901	protein_coding	Peli3	ENSMUST00000146289	processed_transcript		19	-1	4943098	400
ENSMUSG00000108306	processed_pseudogene	Gm44640	ENSMUST00000206894	processed_pseudogene		7	-1	27148636	247
ENSMUSG00000024901	protein_coding	Peli3	ENSMUST00000133254	protein_coding		19	-1	4943073	552
ENSMUSG00000006469	protein_coding	Slc34a3	ENSMUST00000124146	processed_transcript		2	-1	25233046	628
ENSMUSG00000022360	protein_coding	Atad2	ENSMUST00000226526	retained_intron		15	-1	58111343	2934
ENSMUSG00000097434	lincRNA	Gm16630	ENSMUST00000180741	lincRNA		6	-1	48159280	3257
ENSMUSG00000024901	protein_coding	Peli3	ENSMUST00000133504	protein_coding		19	-1	4943067	386
ENSMUSG00000022360	protein_coding	Atad2	ENSMUST00000226507	retained_intron		15	-1	58112158	2826
ENSMUSG00000022360	protein_coding	Atad2	ENSMUST00000227134	retained_intron		15	-1	58118811	2664
ENSMUSG00000024901	protein_coding	Peli3	ENSMUST00000143930	retained_intron		19	-1	4943046	422
ENSMUSG00000022360	protein_coding	Atad2	ENSMUST00000226582	retained_intron		15	-1	58129011	2047
ENSMUSG00000022360	protein_coding	Atad2	ENSMUST00000227171	retained_intron		15	-1	58133292	2141
ENSMUSG00000075330	protein_coding	A930003A15Rik	ENSMUST00000100083	protein_coding	principal5	16	-1	19884264	1116
ENSMUSG00000028568	protein_coding	Btf3l4	ENSMUST00000139464	processed_transcript		4	-1	108830551	560
ENSMUSG00000109496	unprocessed_pseudogene	Olfr1485-ps1	ENSMUST00000208420	unprocessed_pseudogene		19	1	13588290	370
ENSMUSG00000085109	antisense	Gm15356	ENSMUST00000140669	antisense		8	-1	66442809	2741
ENSMUSG00000027843	protein_coding	Ptpn22	ENSMUST00000146071	nonsense_mediated_decay		3	1	103859795	2757
ENSMUSG00000083905	processed_pseudogene	Gm15355	ENSMUST00000118929	processed_pseudogene		8	-1	65817595	285
ENSMUSG00000103261	TEC	Gm36981	ENSMUST00000192340	TEC		3	-1	84063452	4485
ENSMUSG00000008450	protein_coding	Nutf2	ENSMUST00000008594	protein_coding	principal1	8	1	105860580	948
ENSMUSG00000075330	protein_coding	A930003A15Rik	ENSMUST00000231564	protein_coding	alternative2	16	-1	19884274	902
ENSMUSG00000116712	lincRNA	Gm49598	ENSMUST00000232011	lincRNA		16	1	19883504	359
ENSMUSG00000006469	protein_coding	Slc34a3	ENSMUST00000155420	processed_transcript		2	-1	25234218	667
ENSMUSG00000008450	protein_coding	Nutf2	ENSMUST00000212379	retained_intron		8	1	105860611	504
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000154718	protein_coding		10	1	18055861	2402
ENSMUSG00000096289	protein_coding	Olfr1484	ENSMUST00000208104	protein_coding	alternative2	19	1	13583511	3621
ENSMUSG00000008450	protein_coding	Nutf2	ENSMUST00000212610	protein_coding		8	1	105860645	373
ENSMUSG00000008450	protein_coding	Nutf2	ENSMUST00000212484	protein_coding		8	1	105860645	452
ENSMUSG00000020437	protein_coding	Myo1g	ENSMUST00000003459	protein_coding	principal1	11	-1	6520958	3307
ENSMUSG00000095438	antisense	Mir133a-1hg	ENSMUST00000179771	antisense		18	-1	10785883	395
ENSMUSG00000056673	protein_coding	Kdm5d	ENSMUST00000186696	nonsense_mediated_decay		Y	1	897795	3708
ENSMUSG00000008450	protein_coding	Nutf2	ENSMUST00000212200	protein_coding		8	1	105860665	441
ENSMUSG00000041180	protein_coding	Hectd2	ENSMUST00000169036	protein_coding	alternative1	19	1	36554668	3842
ENSMUSG00000008450	protein_coding	Nutf2	ENSMUST00000212398	retained_intron		8	1	105860665	518
ENSMUSG00000008450	protein_coding	Nutf2	ENSMUST00000212042	protein_coding	principal1	8	1	105860983	645
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000155284	nonsense_mediated_decay		10	1	18055906	2208
ENSMUSG00000096289	protein_coding	Olfr1484	ENSMUST00000216014	protein_coding	principal2	19	1	13583511	3842
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000152320	processed_transcript		8	1	65617900	2907
ENSMUSG00000096289	protein_coding	Olfr1484	ENSMUST00000216369	protein_coding	alternative2	19	1	13583511	3764
ENSMUSG00000096289	protein_coding	Olfr1484	ENSMUST00000217451	protein_coding	principal2	19	1	13583511	3628
ENSMUSG00000027843	protein_coding	Ptpn22	ENSMUST00000029433	protein_coding	principal1	3	1	103860277	2743
ENSMUSG00000006469	protein_coding	Slc34a3	ENSMUST00000144884	processed_transcript		2	-1	25234211	653
ENSMUSG00000096289	protein_coding	Olfr1484	ENSMUST00000215567	protein_coding	principal2	19	1	13583511	3699
ENSMUSG00000086863	antisense	Gm15543	ENSMUST00000141307	antisense		6	1	145182275	361
ENSMUSG00000096289	protein_coding	Olfr1484	ENSMUST00000074180	protein_coding	principal2	19	1	13585306	948
ENSMUSG00000006469	protein_coding	Slc34a3	ENSMUST00000137482	processed_transcript		2	-1	25233708	561
ENSMUSG00000009070	protein_coding	Rsph14	ENSMUST00000009214	protein_coding	alternative2	10	-1	75032565	1179
ENSMUSG00000107420	TEC	Gm43910	ENSMUST00000204561	TEC		6	-1	145145397	3241
ENSMUSG00000041180	protein_coding	Hectd2	ENSMUST00000149629	retained_intron		19	1	36554669	4491
ENSMUSG00000006469	protein_coding	Slc34a3	ENSMUST00000152997	processed_transcript		2	-1	25234234	550
ENSMUSG00000029521	protein_coding	Chek2	ENSMUST00000200172	protein_coding		5	1	110839979	328
ENSMUSG00000009070	protein_coding	Rsph14	ENSMUST00000159761	retained_intron		10	-1	75032586	1063
ENSMUSG00000027843	protein_coding	Ptpn22	ENSMUST00000198530	processed_transcript		3	1	103860555	737
ENSMUSG00000006469	protein_coding	Slc34a3	ENSMUST00000142095	processed_transcript		2	-1	25234188	451
ENSMUSG00000027843	protein_coding	Ptpn22	ENSMUST00000197997	retained_intron		3	1	103878057	1833
ENSMUSG00000027843	protein_coding	Ptpn22	ENSMUST00000196385	retained_intron		3	1	103885982	2172
ENSMUSG00000020437	protein_coding	Myo1g	ENSMUST00000144725	nonsense_mediated_decay		11	-1	6520897	2911
ENSMUSG00000033752	protein_coding	Mnd1	ENSMUST00000047368	protein_coding	principal1	3	-1	84155786	875
ENSMUSG00000020437	protein_coding	Myo1g	ENSMUST00000134639	retained_intron		11	-1	6508685	610
ENSMUSG00000027843	protein_coding	Ptpn22	ENSMUST00000198701	processed_transcript		3	1	103886072	570
ENSMUSG00000009070	protein_coding	Rsph14	ENSMUST00000160450	protein_coding		10	-1	75032553	779
ENSMUSG00000009070	protein_coding	Rsph14	ENSMUST00000159994	protein_coding		10	-1	75032528	1728
ENSMUSG00000027843	protein_coding	Ptpn22	ENSMUST00000134373	retained_intron		3	1	103888622	558
ENSMUSG00000041180	protein_coding	Hectd2	ENSMUST00000047247	protein_coding	principal3	19	1	36554669	4731
ENSMUSG00000020437	protein_coding	Myo1g	ENSMUST00000156878	retained_intron		11	-1	6520958	4752
ENSMUSG00000009070	protein_coding	Rsph14	ENSMUST00000160072	protein_coding		10	-1	75032562	571
ENSMUSG00000027843	protein_coding	Ptpn22	ENSMUST00000126548	retained_intron		3	1	103902039	649
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000133942	protein_coding		16	-1	91684435	1407
ENSMUSG00000020437	protein_coding	Myo1g	ENSMUST00000131823	retained_intron		11	-1	6515500	613
ENSMUSG00000083630	processed_pseudogene	Gm15602	ENSMUST00000116162	processed_pseudogene		3	-1	103902963	465
ENSMUSG00000041180	protein_coding	Hectd2	ENSMUST00000141503	retained_intron		19	1	36554678	1116
ENSMUSG00000056673	protein_coding	Kdm5d	ENSMUST00000186726	nonsense_mediated_decay		Y	1	897838	5916
ENSMUSG00000020437	protein_coding	Myo1g	ENSMUST00000146536	nonsense_mediated_decay		11	-1	6520965	483
ENSMUSG00000041180	protein_coding	Hectd2	ENSMUST00000155447	retained_intron		19	1	36554835	506
ENSMUSG00000056673	protein_coding	Kdm5d	ENSMUST00000189626	retained_intron		Y	1	898032	1821
ENSMUSG00000041180	protein_coding	Hectd2	ENSMUST00000155594	nonsense_mediated_decay		19	1	36554866	2214
ENSMUSG00000020437	protein_coding	Myo1g	ENSMUST00000134489	protein_coding		11	-1	6519504	337
ENSMUSG00000056673	protein_coding	Kdm5d	ENSMUST00000185542	retained_intron		Y	1	899482	696
ENSMUSG00000084760	sense_intronic	Gm15472	ENSMUST00000141652	sense_intronic		3	1	103863166	847
ENSMUSG00000009070	protein_coding	Rsph14	ENSMUST00000166088	protein_coding	principal4	10	-1	75032586	1203
ENSMUSG00000041180	protein_coding	Hectd2	ENSMUST00000177381	nonsense_mediated_decay		19	1	36585489	1679
ENSMUSG00000009070	protein_coding	Rsph14	ENSMUST00000179546	protein_coding	alternative2	10	-1	75032553	1190
ENSMUSG00000056673	protein_coding	Kdm5d	ENSMUST00000187296	retained_intron		Y	1	916529	4037
ENSMUSG00000104306	lincRNA	Gm36972	ENSMUST00000194000	lincRNA		1	-1	165777155	676
ENSMUSG00000100270	unprocessed_pseudogene	Gm21803	ENSMUST00000188897	unprocessed_pseudogene		Y	1	89846231	693
ENSMUSG00000056673	protein_coding	Kdm5d	ENSMUST00000189955	retained_intron		Y	1	937783	2770
ENSMUSG00000041180	protein_coding	Hectd2	ENSMUST00000142404	retained_intron		19	1	36605167	712
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000071816	protein_coding	principal4	14	-1	20794088	3703
ENSMUSG00000081138	processed_pseudogene	Gm12834	ENSMUST00000121855	processed_pseudogene		4	-1	115241582	2829
ENSMUSG00000028413	protein_coding	B4galt1	ENSMUST00000030121	protein_coding	principal1	4	-1	40854005	3983
ENSMUSG00000113500	lincRNA	Gm47249	ENSMUST00000220741	lincRNA		13	1	65212111	444
ENSMUSG00000029521	protein_coding	Chek2	ENSMUST00000199937	nonsense_mediated_decay		5	1	110839983	2190
ENSMUSG00000094254	protein_coding	Olfr969	ENSMUST00000213266	protein_coding	principal1	9	1	39790945	1597
ENSMUSG00000028413	protein_coding	B4galt1	ENSMUST00000108096	protein_coding		4	-1	40854005	1413
ENSMUSG00000110393	lincRNA	Gm36445	ENSMUST00000210653	lincRNA		13	1	65241753	1489
ENSMUSG00000094254	protein_coding	Olfr969	ENSMUST00000074566	protein_coding	principal1	9	1	39795377	936
ENSMUSG00000110393	lincRNA	Gm36445	ENSMUST00000209855	lincRNA		13	1	65241753	930
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000126390	protein_coding	principal1	10	1	18055940	2595
ENSMUSG00000110393	lincRNA	Gm36445	ENSMUST00000209951	lincRNA		13	1	65241753	1597
ENSMUSG00000076576	IG_V_gene	Igkv6-32	ENSMUST00000103377	IG_V_gene	principal1	6	-1	70074603	366
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000123893	retained_intron		16	-1	91688765	2482
ENSMUSG00000110393	lincRNA	Gm36445	ENSMUST00000209344	lincRNA		13	1	65242108	1432
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000032774	protein_coding	principal3	7	1	67647410	2492
ENSMUSG00000110393	lincRNA	Gm36445	ENSMUST00000211729	lincRNA		13	1	65242135	1100
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000159763	protein_coding		1	-1	162295636	1305
ENSMUSG00000082740	processed_pseudogene	Gm14127	ENSMUST00000117906	processed_pseudogene		2	-1	150470165	678
ENSMUSG00000113946	processed_pseudogene	Gm47250	ENSMUST00000222171	processed_pseudogene		13	-1	65243867	151
ENSMUSG00000032737	protein_coding	Inppl1	ENSMUST00000035836	protein_coding	principal1	7	-1	101838229	4995
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000195403	retained_intron		1	-1	161985729	3272
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000080440	protein_coding	alternative1	14	-1	20794030	3604
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000216413	nonsense_mediated_decay		10	1	18055959	811
ENSMUSG00000031595	protein_coding	Pdgfrl	ENSMUST00000143216	retained_intron		8	1	40926212	2069
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000150029	protein_coding		10	1	18056004	2462
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000223863	nonsense_mediated_decay		14	-1	20739397	663
ENSMUSG00000032737	protein_coding	Inppl1	ENSMUST00000165052	protein_coding	principal1	7	-1	101837803	4730
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000226630	protein_coding	alternative1	14	-1	20793966	1937
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000128711	retained_intron		10	1	18091468	3108
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000155959	protein_coding		10	1	18093171	631
ENSMUSG00000032737	protein_coding	Inppl1	ENSMUST00000186316	protein_coding		7	-1	101829266	2559
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000225328	protein_coding		14	-1	20739367	570
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000155892	protein_coding		10	1	18094531	721
ENSMUSG00000032737	protein_coding	Inppl1	ENSMUST00000211436	retained_intron		7	-1	101824506	1186
ENSMUSG00000032737	protein_coding	Inppl1	ENSMUST00000185929	protein_coding		7	-1	101837784	3817
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000216576	protein_coding		10	1	18104212	327
ENSMUSG00000058709	protein_coding	Egln2	ENSMUST00000080058	protein_coding	principal1	7	-1	27166802	2107
ENSMUSG00000055942	protein_coding	Obox7	ENSMUST00000183788	protein_coding	principal1	7	1	14659496	1476
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000144287	retained_intron		10	1	18114483	771
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000224887	protein_coding		14	-1	20764268	822
ENSMUSG00000004360	protein_coding	9330159F19Rik	ENSMUST00000092627	protein_coding	principal1	10	1	29211606	5681
ENSMUSG00000032737	protein_coding	Inppl1	ENSMUST00000210116	protein_coding		7	-1	101830150	828
ENSMUSG00000063810	protein_coding	Alms1	ENSMUST00000072018	protein_coding	principal2	6	1	85587531	9986
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000150533	retained_intron		10	1	18122184	432
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000223712	protein_coding		14	-1	20764909	722
ENSMUSG00000055942	protein_coding	Obox7	ENSMUST00000069740	protein_coding	principal1	7	1	14659733	1306
ENSMUSG00000032737	protein_coding	Inppl1	ENSMUST00000211514	retained_intron		7	-1	101836603	269
ENSMUSG00000058709	protein_coding	Egln2	ENSMUST00000152021	processed_transcript		7	-1	27160871	439
ENSMUSG00000063810	protein_coding	Alms1	ENSMUST00000213058	protein_coding	alternative2	6	1	85587646	11163
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000225609	protein_coding		14	-1	20765414	673
ENSMUSG00000019854	protein_coding	Reps1	ENSMUST00000164556	protein_coding		10	1	18055940	2537
ENSMUSG00000032737	protein_coding	Inppl1	ENSMUST00000209861	processed_transcript		7	-1	101836965	398
ENSMUSG00000058709	protein_coding	Egln2	ENSMUST00000108382	protein_coding	principal1	7	-1	27166413	1756
ENSMUSG00000004360	protein_coding	9330159F19Rik	ENSMUST00000213490	nonsense_mediated_decay		10	1	29211695	3309
ENSMUSG00000063810	protein_coding	Alms1	ENSMUST00000201244	retained_intron		6	1	85639463	2729
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000225463	protein_coding		14	-1	20764252	503
ENSMUSG00000055942	protein_coding	Obox7	ENSMUST00000183424	protein_coding		7	1	14659745	552
ENSMUSG00000025940	protein_coding	Tmem70	ENSMUST00000177501	protein_coding	principal3	1	1	16665207	1636
ENSMUSG00000032737	protein_coding	Inppl1	ENSMUST00000209481	retained_intron		7	-1	101838127	1624
ENSMUSG00000004360	protein_coding	9330159F19Rik	ENSMUST00000213489	protein_coding	principal1	10	1	29211705	2992
ENSMUSG00000063810	protein_coding	Alms1	ENSMUST00000202809	retained_intron		6	1	85646730	3586
ENSMUSG00000063810	protein_coding	Alms1	ENSMUST00000201221	retained_intron		6	1	85666683	3041
ENSMUSG00000107278	TEC	Gm42600	ENSMUST00000202081	TEC		6	1	85679277	3588
ENSMUSG00000058709	protein_coding	Egln2	ENSMUST00000134906	processed_transcript		7	-1	27166282	455
ENSMUSG00000025940	protein_coding	Tmem70	ENSMUST00000177532	processed_transcript		1	1	16665210	517
ENSMUSG00000110723	protein_coding	Gm49353	ENSMUST00000217011	protein_coding	principal1	10	1	29198954	724
ENSMUSG00000112292	processed_pseudogene	Gm8275	ENSMUST00000219732	processed_pseudogene		12	-1	79979851	424
ENSMUSG00000031595	protein_coding	Pdgfrl	ENSMUST00000034004	protein_coding	principal1	8	1	40926233	1548
ENSMUSG00000111933	lincRNA	Gm36660	ENSMUST00000218323	lincRNA		12	-1	80081434	3871
ENSMUSG00000028568	protein_coding	Btf3l4	ENSMUST00000102741	protein_coding	principal1	4	-1	108833564	1033
ENSMUSG00000112386	lincRNA	Gm47752	ENSMUST00000219740	lincRNA		12	1	80091367	361
ENSMUSG00000028568	protein_coding	Btf3l4	ENSMUST00000125707	processed_transcript		4	-1	108826180	646
ENSMUSG00000028568	protein_coding	Btf3l4	ENSMUST00000102739	protein_coding	principal1	4	-1	108831931	723
ENSMUSG00000029521	protein_coding	Chek2	ENSMUST00000066160	protein_coding	principal1	5	1	110840000	2276
ENSMUSG00000039182	protein_coding	AW209491	ENSMUST00000178289	protein_coding	principal1	13	1	14630154	2035
ENSMUSG00000007946	protein_coding	Phox2a	ENSMUST00000008090	protein_coding	principal1	7	1	101818313	1609
ENSMUSG00000028568	protein_coding	Btf3l4	ENSMUST00000102740	protein_coding	principal1	4	-1	108833554	624
ENSMUSG00000034818	protein_coding	Celf5	ENSMUST00000118763	protein_coding		10	-1	81482709	4391
ENSMUSG00000105781	IG_V_pseudogene	Igkv8-31	ENSMUST00000200040	IG_V_pseudogene		6	-1	70106415	372
ENSMUSG00000025940	protein_coding	Tmem70	ENSMUST00000065373	protein_coding	alternative2	1	1	16665210	1710
ENSMUSG00000029521	protein_coding	Chek2	ENSMUST00000198373	protein_coding		5	1	110840229	446
ENSMUSG00000007946	protein_coding	Phox2a	ENSMUST00000209878	retained_intron		7	1	101820746	614
ENSMUSG00000082351	processed_pseudogene	Gm11260	ENSMUST00000121163	processed_pseudogene		4	1	78233986	942
ENSMUSG00000110295	processed_pseudogene	Gm45319	ENSMUST00000210220	processed_pseudogene		7	1	101852959	318
ENSMUSG00000025940	protein_coding	Tmem70	ENSMUST00000176451	processed_transcript		1	1	16665236	374
ENSMUSG00000085840	lincRNA	Gm11261	ENSMUST00000123051	lincRNA		4	-1	78661575	712
ENSMUSG00000085840	lincRNA	Gm11261	ENSMUST00000132470	lincRNA		4	-1	78661588	838
ENSMUSG00000034818	protein_coding	Celf5	ENSMUST00000119060	protein_coding		10	-1	81473127	4166
ENSMUSG00000029521	protein_coding	Chek2	ENSMUST00000200630	retained_intron		5	1	110841454	634
ENSMUSG00000078787	protein_coding	Cyp2t4	ENSMUST00000108385	protein_coding	alternative2	7	1	27155082	1631
ENSMUSG00000085840	lincRNA	Gm11261	ENSMUST00000126647	lincRNA		4	-1	78660382	305
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000107471	protein_coding	alternative2	7	1	67647425	2216
ENSMUSG00000029521	protein_coding	Chek2	ENSMUST00000196650	processed_transcript		5	1	110866271	341
ENSMUSG00000083629	processed_pseudogene	Gm11262	ENSMUST00000119326	processed_pseudogene		4	1	78697652	833
ENSMUSG00000034818	protein_coding	Celf5	ENSMUST00000120856	protein_coding		10	-1	81474844	3861
ENSMUSG00000078787	protein_coding	Cyp2t4	ENSMUST00000164093	protein_coding	principal2	7	1	27153714	1512
ENSMUSG00000039182	protein_coding	AW209491	ENSMUST00000038690	protein_coding	principal1	13	1	14630248	2914
ENSMUSG00000083496	processed_pseudogene	Gm11263	ENSMUST00000121853	processed_pseudogene		4	1	79327708	749
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000126093	processed_transcript		7	1	67647450	1991
ENSMUSG00000034818	protein_coding	Celf5	ENSMUST00000120508	protein_coding		10	-1	81482684	2042
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000125839	processed_transcript		7	1	67647454	436
ENSMUSG00000108275	processed_pseudogene	Gm7880	ENSMUST00000203748	processed_pseudogene		6	-1	48382060	871
ENSMUSG00000076577	IG_V_gene	Igkv8-30	ENSMUST00000103378	IG_V_gene	principal1	6	-1	70117620	368
ENSMUSG00000084248	processed_pseudogene	Gm11409	ENSMUST00000118621	processed_pseudogene		4	1	79874351	403
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000135236	processed_transcript		7	1	67647460	496
ENSMUSG00000030263	protein_coding	Lrmp	ENSMUST00000135984	nonsense_mediated_decay		6	1	145115653	2065
ENSMUSG00000039182	protein_coding	AW209491	ENSMUST00000222052	protein_coding		13	1	14630277	726
ENSMUSG00000106192	processed_pseudogene	Gm42818	ENSMUST00000198869	processed_pseudogene		6	1	70129652	987
ENSMUSG00000107875	lincRNA	Gm44696	ENSMUST00000181943	lincRNA		6	-1	48395408	1229
ENSMUSG00000028568	protein_coding	Btf3l4	ENSMUST00000102742	protein_coding	principal1	4	-1	108833614	3141
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000130681	processed_transcript		7	1	67649150	789
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000153475	processed_transcript		7	1	67655177	903
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000107470	protein_coding	alternative2	7	1	67655447	1915
ENSMUSG00000034818	protein_coding	Celf5	ENSMUST00000238823	protein_coding	principal1	10	-1	81482704	1477
ENSMUSG00000113354	unprocessed_pseudogene	Gm20789	ENSMUST00000221002	unprocessed_pseudogene		13	1	50561473	4195
ENSMUSG00000107397	TEC	4930402H05Rik	ENSMUST00000203115	TEC		6	-1	91210044	2829
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000145348	processed_transcript		7	1	67666788	540
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000155024	processed_transcript		7	1	67669989	399
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000208764	nonsense_mediated_decay		7	1	67670052	2684
ENSMUSG00000076578	IG_V_gene	Igkv6-29	ENSMUST00000197371	IG_V_gene	principal5	6	-1	70139110	375
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000137919	processed_transcript		7	1	67679296	517
ENSMUSG00000076578	IG_V_gene	Igkv6-29	ENSMUST00000103379	IG_V_gene	alternative2	6	-1	70139082	344
ENSMUSG00000034818	protein_coding	Celf5	ENSMUST00000145375	retained_intron		10	-1	81470807	605
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000110258	protein_coding	alternative1	8	1	65618009	2581
ENSMUSG00000082179	processed_pseudogene	Gm11407	ENSMUST00000120362	processed_pseudogene		4	1	80002331	1058
ENSMUSG00000030555	protein_coding	Ttc23	ENSMUST00000154697	processed_transcript		7	1	67725261	523
ENSMUSG00000083076	processed_pseudogene	Gm11408	ENSMUST00000117889	processed_pseudogene		4	-1	80003914	519
ENSMUSG00000038916	protein_coding	Soga3	ENSMUST00000092629	protein_coding	principal1	10	1	29143839	4105
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000110256	protein_coding		8	1	65618025	3288
ENSMUSG00000034818	protein_coding	Celf5	ENSMUST00000141207	retained_intron		10	-1	81473378	945
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000155804	retained_intron		8	1	65618037	1505
ENSMUSG00000034818	protein_coding	Celf5	ENSMUST00000128494	retained_intron		10	-1	81482672	748
ENSMUSG00000038916	protein_coding	Soga3	ENSMUST00000216757	protein_coding		10	1	29144059	606
ENSMUSG00000038916	protein_coding	Soga3	ENSMUST00000213243	protein_coding		10	1	29147335	597
ENSMUSG00000094356	IG_V_gene	Igkv8-28	ENSMUST00000197525	IG_V_gene		6	-1	70144166	370
ENSMUSG00000034818	protein_coding	Celf5	ENSMUST00000147524	protein_coding		10	-1	81473002	442
ENSMUSG00000038677	protein_coding	Scube3	ENSMUST00000043503	protein_coding	principal2	17	1	28142141	6876
ENSMUSG00000084849	antisense	Gm16105	ENSMUST00000156926	antisense		10	1	81461159	697
ENSMUSG00000021032	protein_coding	Ngb	ENSMUST00000110177	protein_coding	alternative1	12	-1	87102522	1611
ENSMUSG00000032725	protein_coding	Folr2	ENSMUST00000094141	protein_coding	principal1	7	-1	101845317	1067
ENSMUSG00000094356	IG_V_gene	Igkv8-28	ENSMUST00000103380	IG_V_gene	principal1	6	-1	70143897	305
ENSMUSG00000038916	protein_coding	Soga3	ENSMUST00000213451	processed_transcript		10	1	29147721	599
ENSMUSG00000038677	protein_coding	Scube3	ENSMUST00000233905	protein_coding	alternative1	17	1	28142318	3784
ENSMUSG00000038916	protein_coding	Soga3	ENSMUST00000214863	processed_transcript		10	1	29147797	686
ENSMUSG00000032725	protein_coding	Folr2	ENSMUST00000210598	protein_coding	principal1	7	-1	101857194	1204
ENSMUSG00000038677	protein_coding	Scube3	ENSMUST00000132670	protein_coding		17	1	28142526	4354
ENSMUSG00000056316	TEC	Gm9996	ENSMUST00000070359	TEC		10	-1	29144194	913
ENSMUSG00000032725	protein_coding	Folr2	ENSMUST00000211604	retained_intron		7	-1	101841176	715
ENSMUSG00000038677	protein_coding	Scube3	ENSMUST00000137147	protein_coding	alternative1	17	1	28142526	3822
ENSMUSG00000015242	protein_coding	Nipsnap3a	ENSMUST00000015386	nonsense_mediated_decay		4	1	52989272	1104
ENSMUSG00000096641	protein_coding	Gm904	ENSMUST00000192039	processed_transcript		13	1	50643232	481
ENSMUSG00000025395	protein_coding	Prim1	ENSMUST00000026461	protein_coding	principal2	10	1	128015172	1583
ENSMUSG00000110298	transcribed_unprocessed_pseudogene	Gm8189	ENSMUST00000211035	processed_transcript		19	-1	8491868	2039
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000110255	protein_coding	principal3	8	1	65618086	4177
ENSMUSG00000015242	protein_coding	Nipsnap3a	ENSMUST00000107666	protein_coding	alternative2	4	1	52989418	1553
ENSMUSG00000032725	protein_coding	Folr2	ENSMUST00000209329	protein_coding		7	-1	101845331	667
ENSMUSG00000096641	protein_coding	Gm904	ENSMUST00000191999	transcribed_unprocessed_pseudogene		13	1	50643272	309
ENSMUSG00000015242	protein_coding	Nipsnap3a	ENSMUST00000123780	retained_intron		4	1	53000264	309
ENSMUSG00000021032	protein_coding	Ngb	ENSMUST00000021420	protein_coding	principal3	12	-1	87102539	1616
ENSMUSG00000110298	transcribed_unprocessed_pseudogene	Gm8189	ENSMUST00000209457	processed_transcript		19	-1	8479056	454
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000110259	protein_coding		8	1	65618525	3181
ENSMUSG00000032725	protein_coding	Folr2	ENSMUST00000211566	protein_coding		7	-1	101845304	374
ENSMUSG00000110298	transcribed_unprocessed_pseudogene	Gm8189	ENSMUST00000211159	transcribed_unprocessed_pseudogene		19	-1	8541798	1225
ENSMUSG00000096641	protein_coding	Gm904	ENSMUST00000099519	protein_coding	principal1	13	1	50643228	649
ENSMUSG00000073985	antisense	Gm10602	ENSMUST00000211428	antisense		7	1	101836503	3672
ENSMUSG00000086174	processed_pseudogene	Gm6425	ENSMUST00000136332	processed_pseudogene		19	-1	8589196	790
ENSMUSG00000021032	protein_coding	Ngb	ENSMUST00000110176	protein_coding		12	-1	87102350	908
ENSMUSG00000015242	protein_coding	Nipsnap3a	ENSMUST00000188045	protein_coding	principal2	4	1	52989284	1099
ENSMUSG00000020447	protein_coding	Npc1l1	ENSMUST00000004505	protein_coding	principal1	11	-1	6230143	4467
ENSMUSG00000073985	antisense	Gm10602	ENSMUST00000211793	antisense		7	1	101837882	1310
ENSMUSG00000025395	protein_coding	Prim1	ENSMUST00000133285	retained_intron		10	1	128015196	3128
ENSMUSG00000109343	unprocessed_pseudogene	Olfr1486-ps1	ENSMUST00000208835	unprocessed_pseudogene		19	1	13593996	220
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000225660	retained_intron		14	-1	20794049	2130
ENSMUSG00000025395	protein_coding	Prim1	ENSMUST00000135580	retained_intron		10	1	128019956	760
ENSMUSG00000073985	antisense	Gm10602	ENSMUST00000098239	pseudogene		7	1	101836751	609
ENSMUSG00000038677	protein_coding	Scube3	ENSMUST00000232984	retained_intron		17	1	28158874	604
ENSMUSG00000113238	lincRNA	Gm47251	ENSMUST00000223117	lincRNA		13	-1	65253703	794
ENSMUSG00000109281	processed_pseudogene	Gm44651	ENSMUST00000207343	processed_pseudogene		7	-1	19949572	372
ENSMUSG00000025395	protein_coding	Prim1	ENSMUST00000138330	retained_intron		10	1	128026687	819
ENSMUSG00000076580	IG_V_gene	Igkv8-27	ENSMUST00000197272	IG_V_gene		6	-1	70172270	360
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000225958	retained_intron		14	-1	20794054	2106
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000039540	protein_coding		8	1	66386294	2733
ENSMUSG00000076580	IG_V_gene	Igkv8-27	ENSMUST00000103381	IG_V_gene	principal1	6	-1	70172108	300
ENSMUSG00000083219	processed_pseudogene	Gm11410	ENSMUST00000120053	processed_pseudogene		4	1	80003989	1143
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000224245	retained_intron		14	-1	20765509	343
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000225800	processed_transcript		14	-1	20792665	535
ENSMUSG00000074847	protein_coding	Gm10775	ENSMUST00000099425	protein_coding	principal1	13	1	65259539	1203
ENSMUSG00000076581	IG_V_gene	Igkv8-26	ENSMUST00000103382	IG_V_gene	principal1	6	1	70193228	371
ENSMUSG00000025395	protein_coding	Prim1	ENSMUST00000178041	protein_coding	alternative1	10	1	128015168	1536
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000224566	processed_transcript		14	-1	20791158	551
ENSMUSG00000082555	processed_pseudogene	Gm11406	ENSMUST00000117418	processed_pseudogene		4	1	80440398	484
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000224804	processed_transcript		14	-1	20794025	452
ENSMUSG00000112136	processed_pseudogene	Gm40692	ENSMUST00000220411	processed_pseudogene		10	1	75034345	491
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000110253	protein_coding		8	1	66386301	2748
ENSMUSG00000112960	unprocessed_pseudogene	Gm47254	ENSMUST00000222969	unprocessed_pseudogene		13	-1	65264878	202
ENSMUSG00000021820	protein_coding	Camk2g	ENSMUST00000225635	retained_intron		14	-1	20794011	456
ENSMUSG00000044288	protein_coding	Cnr1	ENSMUST00000057188	protein_coding	principal1	4	1	33924632	5807
ENSMUSG00000038677	protein_coding	Scube3	ENSMUST00000148342	retained_intron		17	1	28160761	4003
ENSMUSG00000082259	processed_pseudogene	Gm13808	ENSMUST00000121353	processed_pseudogene		2	1	100058933	184
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000148989	protein_coding	principal1	18	1	49979427	1002
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000072482	protein_coding		8	1	65967157	3953
ENSMUSG00000038677	protein_coding	Scube3	ENSMUST00000142170	retained_intron		17	1	28165809	812
ENSMUSG00000084209	processed_pseudogene	Gm13811	ENSMUST00000117800	processed_pseudogene		2	1	100336203	256
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000098708	protein_coding	principal3	8	1	66121742	4000
ENSMUSG00000044288	protein_coding	Cnr1	ENSMUST00000133462	processed_transcript		4	1	33924593	757
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000087655	processed_transcript		18	1	49979491	5085
ENSMUSG00000036469	protein_coding	Marchf1	ENSMUST00000178982	protein_coding	alternative1	8	1	66121742	4012
ENSMUSG00000101275	lincRNA	1700012E03Rik	ENSMUST00000186237	lincRNA		1	1	120435805	1377
ENSMUSG00000044288	protein_coding	Cnr1	ENSMUST00000084736	protein_coding	principal1	4	1	33926202	5761
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000117159	protein_coding	alternative2	16	-1	91688765	2215
ENSMUSG00000086156	antisense	Gm15354	ENSMUST00000132019	antisense		8	-1	66387535	1772
ENSMUSG00000099606	processed_pseudogene	Gm28537	ENSMUST00000189026	processed_pseudogene		Y	-1	77817355	315
ENSMUSG00000100063	lincRNA	Gm28538	ENSMUST00000190919	lincRNA		Y	-1	77822104	2166
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000179937	protein_coding		18	1	49979529	2385
ENSMUSG00000040498	protein_coding	Igsf23	ENSMUST00000208974	protein_coding	alternative2	7	-1	19950573	1850
ENSMUSG00000081153	processed_pseudogene	Gm11401	ENSMUST00000117212	processed_pseudogene		11	1	6242378	344
ENSMUSG00000100722	lincRNA	Gm29569	ENSMUST00000187955	lincRNA		Y	1	77854094	1499
ENSMUSG00000094918	protein_coding	Gm8765	ENSMUST00000099518	protein_coding	principal1	13	1	50698312	3152
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000153545	processed_transcript		18	1	49979535	528
ENSMUSG00000100722	lincRNA	Gm29569	ENSMUST00000187498	lincRNA		Y	1	77854547	438
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000139324	nonsense_mediated_decay		16	-1	91688765	2181
ENSMUSG00000105727	processed_pseudogene	Gm8828	ENSMUST00000196786	processed_pseudogene		6	-1	70213767	1290
ENSMUSG00000040498	protein_coding	Igsf23	ENSMUST00000043440	protein_coding	principal2	7	-1	19950756	1908
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000126666	protein_coding		18	1	50019567	906
ENSMUSG00000096898	protein_coding	Gm20867	ENSMUST00000190987	protein_coding	principal1	Y	-1	77963204	1224
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000145726	protein_coding		18	1	50031018	632
ENSMUSG00000113652	lincRNA	4930518P08Rik	ENSMUST00000221281	lincRNA		13	-1	50765248	1187
ENSMUSG00000046814	protein_coding	Gchfr	ENSMUST00000057454	protein_coding	principal1	2	1	119167773	645
ENSMUSG00000096898	protein_coding	Gm20867	ENSMUST00000178900	protein_coding	principal1	Y	-1	77961690	684
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000124175	processed_transcript		18	1	50031028	392
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000114031	protein_coding	alternative2	16	-1	91688765	2147
ENSMUSG00000030340	protein_coding	Scnn1a	ENSMUST00000176655	protein_coding		6	1	125320659	3354
ENSMUSG00000020034	protein_coding	Tcp11l2	ENSMUST00000020223	protein_coding	principal1	10	1	84576626	2725
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000128377	protein_coding		18	1	50031029	822
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000023682	protein_coding	principal2	16	-1	91688770	2365
ENSMUSG00000083138	protein_coding	Cyp4a29	ENSMUST00000118278	protein_coding	principal1	4	1	115242084	1530
ENSMUSG00000030340	protein_coding	Scnn1a	ENSMUST00000176110	protein_coding	alternative2	6	1	125320674	3494
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000155403	retained_intron		18	1	50051710	790
ENSMUSG00000040498	protein_coding	Igsf23	ENSMUST00000208210	processed_transcript		7	-1	19944898	832
ENSMUSG00000020034	protein_coding	Tcp11l2	ENSMUST00000162874	retained_intron		10	1	84576897	1555
ENSMUSG00000040498	protein_coding	Igsf23	ENSMUST00000207513	retained_intron		7	-1	19950745	883
ENSMUSG00000030340	protein_coding	Scnn1a	ENSMUST00000176365	protein_coding		6	1	125321205	560
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000134348	protein_coding		18	1	50051718	658
ENSMUSG00000020034	protein_coding	Tcp11l2	ENSMUST00000160057	retained_intron		10	1	84594653	616
ENSMUSG00000110596	processed_pseudogene	Gm45859	ENSMUST00000212794	processed_pseudogene		1	-1	72706502	214
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000153873	protein_coding		18	1	50051721	784
ENSMUSG00000030340	protein_coding	Scnn1a	ENSMUST00000175966	nonsense_mediated_decay		6	1	125321279	2154
ENSMUSG00000025779	protein_coding	Ly96	ENSMUST00000191260	retained_intron		1	1	16688051	666
ENSMUSG00000063796	protein_coding	Slc22a8	ENSMUST00000237904	retained_intron		19	1	8591254	664
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000145833	nonsense_mediated_decay		16	-1	91687875	1182
ENSMUSG00000032661	protein_coding	Oas3	ENSMUST00000044833	protein_coding	principal1	5	-1	120777661	4720
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000136699	nonsense_mediated_decay		16	-1	91687875	1565
ENSMUSG00000015671	protein_coding	Psma2	ENSMUST00000170836	protein_coding	principal1	13	1	14613240	2911
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000144461	nonsense_mediated_decay		16	-1	91688717	1755
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000148159	protein_coding		18	1	50053282	1921
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000138560	protein_coding		16	-1	91688703	1654
ENSMUSG00000015671	protein_coding	Psma2	ENSMUST00000221168	protein_coding		13	1	14616772	1353
ENSMUSG00000032661	protein_coding	Oas3	ENSMUST00000165820	protein_coding		5	-1	120756259	721
ENSMUSG00000062210	protein_coding	Tnfaip8	ENSMUST00000180305	protein_coding		18	1	50046740	369
ENSMUSG00000032661	protein_coding	Oas3	ENSMUST00000200795	retained_intron		5	-1	120757655	2257
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000231425	retained_intron		16	-1	91681390	308
ENSMUSG00000022960	protein_coding	Donson	ENSMUST00000232177	retained_intron		16	-1	91682620	458
ENSMUSG00000030340	protein_coding	Scnn1a	ENSMUST00000081440	protein_coding	principal2	6	1	125321340	3499
ENSMUSG00000102011	lincRNA	Gm28930	ENSMUST00000189525	lincRNA		Y	-1	89935013	437
ENSMUSG00000110912	protein_coding	Olfr1080	ENSMUST00000213185	protein_coding	principal1	2	-1	86558235	1582
ENSMUSG00000086600	processed_transcript	C030005K06Rik	ENSMUST00000151719	processed_transcript		18	-1	50053660	548
ENSMUSG00000032661	protein_coding	Oas3	ENSMUST00000166703	retained_intron		5	-1	120777640	2329
ENSMUSG00000030340	protein_coding	Scnn1a	ENSMUST00000176442	protein_coding		6	1	125321411	2323
ENSMUSG00000042474	protein_coding	Fcmr	ENSMUST00000038829	protein_coding	principal1	1	1	130865669	1600
ENSMUSG00000030340	protein_coding	Scnn1a	ENSMUST00000177329	protein_coding	alternative2	6	1	125321521	2807
ENSMUSG00000059382	protein_coding	Tas2r120	ENSMUST00000071707	protein_coding	principal1	6	1	132656953	892
ENSMUSG00000086600	processed_transcript	C030005K06Rik	ENSMUST00000129164	processed_transcript		18	-1	50053844	2076
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000086074	protein_coding	alternative1	1	-1	162478034	7523
ENSMUSG00000081282	processed_pseudogene	Gm13836	ENSMUST00000121159	processed_pseudogene		5	-1	115492455	501
ENSMUSG00000086600	processed_transcript	C030005K06Rik	ENSMUST00000153361	processed_transcript		18	-1	50053844	650
ENSMUSG00000084352	processed_pseudogene	Gm12370	ENSMUST00000117809	processed_pseudogene		4	1	36444070	604
ENSMUSG00000042474	protein_coding	Fcmr	ENSMUST00000149355	processed_transcript		1	1	130865780	433
ENSMUSG00000086600	processed_transcript	C030005K06Rik	ENSMUST00000147073	processed_transcript		18	-1	50053605	753
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000070330	protein_coding	principal2	1	-1	162478034	4601
ENSMUSG00000071150	protein_coding	Tas2r121	ENSMUST00000095395	protein_coding	principal1	6	-1	132701007	918
ENSMUSG00000042474	protein_coding	Fcmr	ENSMUST00000126821	processed_transcript		1	1	130878158	548
ENSMUSG00000042474	protein_coding	Fcmr	ENSMUST00000145446	processed_transcript		1	1	130878331	497
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000193110	retained_intron		1	-1	161996014	4500
ENSMUSG00000027933	protein_coding	Ints3	ENSMUST00000071488	protein_coding	principal2	3	-1	90433303	4038
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000160665	protein_coding		1	-1	162295580	1389
ENSMUSG00000078280	protein_coding	Tas2r122	ENSMUST00000105077	protein_coding	principal1	6	-1	132711928	930
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000115791	protein_coding	alternative2	17	1	5941280	5664
ENSMUSG00000030554	protein_coding	Synm	ENSMUST00000074233	protein_coding	principal4	7	-1	67759693	7818
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000161539	retained_intron		1	-1	162134752	3842
ENSMUSG00000030554	protein_coding	Synm	ENSMUST00000208231	protein_coding	alternative2	7	-1	67759693	4457
ENSMUSG00000071149	protein_coding	Tas2r115	ENSMUST00000095394	protein_coding	principal1	6	-1	132738035	1033
ENSMUSG00000045083	protein_coding	Lingo2	ENSMUST00000065173	protein_coding	principal1	4	-1	35845204	2910
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000162330	processed_transcript		1	-1	162295595	421
ENSMUSG00000107669	unprocessed_pseudogene	Gm44137	ENSMUST00000203670	unprocessed_pseudogene		6	-1	132746638	367
ENSMUSG00000025779	protein_coding	Ly96	ENSMUST00000026881	protein_coding	principal1	1	1	16688433	632
ENSMUSG00000027933	protein_coding	Ints3	ENSMUST00000029542	protein_coding	principal2	3	-1	90433529	4337
ENSMUSG00000020841	protein_coding	Cpd	ENSMUST00000021201	protein_coding	principal1	11	-1	76847018	7946
ENSMUSG00000060412	protein_coding	Tas2r124	ENSMUST00000076150	protein_coding	principal1	6	1	132754730	930
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000160173	processed_transcript		1	-1	162313683	725
ENSMUSG00000025779	protein_coding	Ly96	ENSMUST00000190366	protein_coding		1	1	16688508	429
ENSMUSG00000045083	protein_coding	Lingo2	ENSMUST00000098151	protein_coding	principal1	4	-1	36136463	2781
ENSMUSG00000020841	protein_coding	Cpd	ENSMUST00000151584	retained_intron		11	-1	76791022	351
ENSMUSG00000020841	protein_coding	Cpd	ENSMUST00000132796	retained_intron		11	-1	76808826	487
ENSMUSG00000105309	unprocessed_pseudogene	Gm21461	ENSMUST00000200382	unprocessed_pseudogene		5	-1	86863506	863
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000161155	retained_intron		1	-1	162478012	3819
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000161894	processed_transcript		1	-1	162424589	426
ENSMUSG00000040265	protein_coding	Dnm3	ENSMUST00000195768	retained_intron		1	-1	162407335	2470
ENSMUSG00000030554	protein_coding	Synm	ENSMUST00000051389	protein_coding	alternative2	7	-1	67759742	6953
ENSMUSG00000060534	protein_coding	Dcc	ENSMUST00000114943	protein_coding	principal1	18	-1	72351069	10323
ENSMUSG00000102994	TEC	Gm37767	ENSMUST00000193239	TEC		1	-1	162088468	1834
ENSMUSG00000019990	protein_coding	Pde7b	ENSMUST00000020165	protein_coding	principal3	10	-1	20725078	4137
ENSMUSG00000040231	protein_coding	Syngr4	ENSMUST00000211254	processed_transcript		7	-1	45896699	562
ENSMUSG00000045083	protein_coding	Lingo2	ENSMUST00000108122	protein_coding	principal1	4	-1	36951223	3362
ENSMUSG00000060534	protein_coding	Dcc	ENSMUST00000073379	protein_coding		18	-1	72351017	4855
ENSMUSG00000104602	processed_pseudogene	Gm42779	ENSMUST00000198807	processed_pseudogene		5	1	110876603	406
ENSMUSG00000060534	protein_coding	Dcc	ENSMUST00000126030	retained_intron		18	-1	72351041	3855
ENSMUSG00000045083	protein_coding	Lingo2	ENSMUST00000124999	processed_transcript		4	-1	36950486	640
ENSMUSG00000063796	protein_coding	Slc22a8	ENSMUST00000010251	protein_coding	principal1	19	1	8591289	3444
ENSMUSG00000027933	protein_coding	Ints3	ENSMUST00000199992	retained_intron		3	-1	90403214	1891
ENSMUSG00000045083	protein_coding	Lingo2	ENSMUST00000145615	processed_transcript		4	-1	36951744	3808
ENSMUSG00000030554	protein_coding	Synm	ENSMUST00000208815	protein_coding	alternative2	7	-1	67759684	2697
ENSMUSG00000027933	protein_coding	Ints3	ENSMUST00000196530	protein_coding	alternative2	3	-1	90433613	3778
ENSMUSG00000045083	protein_coding	Lingo2	ENSMUST00000127372	processed_transcript		4	-1	36950467	617
ENSMUSG00000102073	unprocessed_pseudogene	Gm6818	ENSMUST00000190556	unprocessed_pseudogene		7	-1	38402768	2558
ENSMUSG00000099781	unprocessed_pseudogene	Gm28583	ENSMUST00000188903	unprocessed_pseudogene		7	-1	38432048	2141
ENSMUSG00000027933	protein_coding	Ints3	ENSMUST00000198776	retained_intron		3	-1	90400775	556
ENSMUSG00000045083	protein_coding	Lingo2	ENSMUST00000144170	processed_transcript		4	-1	36950489	425
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000231506	protein_coding		11	1	70016942	2827
ENSMUSG00000063796	protein_coding	Slc22a8	ENSMUST00000170817	protein_coding	principal1	19	1	8591254	3398
ENSMUSG00000030554	protein_coding	Synm	ENSMUST00000207102	protein_coding		7	-1	67740594	3388
ENSMUSG00000027933	protein_coding	Ints3	ENSMUST00000199158	retained_intron		3	-1	90402674	619
ENSMUSG00000109115	TEC	Gm44669	ENSMUST00000207774	TEC		7	-1	67681303	1969
ENSMUSG00000045083	protein_coding	Lingo2	ENSMUST00000125128	processed_transcript		4	-1	36951747	368
ENSMUSG00000019990	protein_coding	Pde7b	ENSMUST00000169016	nonsense_mediated_decay		10	-1	20548328	3257
ENSMUSG00000019990	protein_coding	Pde7b	ENSMUST00000169404	protein_coding	alternative2	10	-1	20548328	1697
ENSMUSG00000026698	protein_coding	Pigc	ENSMUST00000111594	protein_coding	principal1	1	1	161969186	3290
ENSMUSG00000045083	protein_coding	Lingo2	ENSMUST00000108124	protein_coding	principal1	4	-1	36056726	2414
ENSMUSG00000044847	protein_coding	Lsm11	ENSMUST00000129820	protein_coding	principal1	11	-1	45944935	6453
ENSMUSG00000019990	protein_coding	Pde7b	ENSMUST00000170265	protein_coding	alternative2	10	-1	20724696	1380
ENSMUSG00000045083	protein_coding	Lingo2	ENSMUST00000164772	protein_coding	principal1	4	-1	35845204	3562
ENSMUSG00000082169	processed_pseudogene	Gm12369	ENSMUST00000121343	processed_pseudogene		4	-1	36004179	942
ENSMUSG00000044847	protein_coding	Lsm11	ENSMUST00000062458	nonsense_mediated_decay		11	-1	45944935	2126
ENSMUSG00000019990	protein_coding	Pde7b	ENSMUST00000164195	protein_coding	alternative2	10	-1	20548470	1665
ENSMUSG00000027933	protein_coding	Ints3	ENSMUST00000198562	retained_intron		3	-1	90433622	2226
ENSMUSG00000019990	protein_coding	Pde7b	ENSMUST00000217240	retained_intron		10	-1	20446891	5364
ENSMUSG00000019990	protein_coding	Pde7b	ENSMUST00000170683	retained_intron		10	-1	20725032	550
ENSMUSG00000094846	protein_coding	Olfr1487	ENSMUST00000217061	protein_coding	principal1	19	1	13617375	4080
ENSMUSG00000019990	protein_coding	Pde7b	ENSMUST00000166147	retained_intron		10	-1	20725032	2735
ENSMUSG00000026698	protein_coding	Pigc	ENSMUST00000028021	protein_coding	principal1	1	1	161969188	2196
ENSMUSG00000101708	transcribed_processed_pseudogene	Gm28453	ENSMUST00000185556	processed_transcript		7	1	38379365	1323
ENSMUSG00000092051	transcribed_processed_pseudogene	Gm17229	ENSMUST00000097355	processed_transcript		10	-1	20518164	1138
ENSMUSG00000094846	protein_coding	Olfr1487	ENSMUST00000209005	protein_coding		19	1	13617420	2061
ENSMUSG00000092051	transcribed_processed_pseudogene	Gm17229	ENSMUST00000166792	transcribed_processed_pseudogene		10	-1	20519768	1753
ENSMUSG00000094846	protein_coding	Olfr1487	ENSMUST00000208347	protein_coding		19	1	13617425	436
ENSMUSG00000094846	protein_coding	Olfr1487	ENSMUST00000216688	protein_coding		19	1	13617921	2038
ENSMUSG00000091730	processed_pseudogene	Gm17230	ENSMUST00000171194	processed_pseudogene		10	1	20625635	3942
ENSMUSG00000101708	transcribed_processed_pseudogene	Gm28453	ENSMUST00000185975	processed_transcript		7	1	38379383	1337
ENSMUSG00000101708	transcribed_processed_pseudogene	Gm28453	ENSMUST00000187041	transcribed_processed_pseudogene		7	1	38442148	189
ENSMUSG00000040231	protein_coding	Syngr4	ENSMUST00000039049	protein_coding	principal1	7	-1	45896714	967
ENSMUSG00000030263	protein_coding	Lrmp	ENSMUST00000032396	protein_coding	principal1	6	1	145121739	2319
ENSMUSG00000081309	processed_pseudogene	Gm12397	ENSMUST00000117674	processed_pseudogene		4	-1	40913355	615
ENSMUSG00000094846	protein_coding	Olfr1487	ENSMUST00000076856	protein_coding	principal1	19	1	13619164	948
ENSMUSG00000109285	unprocessed_pseudogene	Olfr1488-ps1	ENSMUST00000207436	unprocessed_pseudogene		19	1	13625625	136
ENSMUSG00000026698	protein_coding	Pigc	ENSMUST00000193784	protein_coding	principal1	1	1	161969228	4207
ENSMUSG00000040231	protein_coding	Syngr4	ENSMUST00000120299	protein_coding		7	-1	45896670	722
ENSMUSG00000006850	protein_coding	Tmco6	ENSMUST00000237727	nonsense_mediated_decay		18	1	36735039	1736
ENSMUSG00000113093	processed_transcript	Gm36862	ENSMUST00000222758	lincRNA		12	1	17553768	1051
ENSMUSG00000113093	processed_transcript	Gm36862	ENSMUST00000220894	retained_intron		12	1	17557699	776
ENSMUSG00000030263	protein_coding	Lrmp	ENSMUST00000149244	retained_intron		6	1	145121742	2019
ENSMUSG00000113093	processed_transcript	Gm36862	ENSMUST00000222985	retained_intron		12	1	17557699	1050
ENSMUSG00000113093	processed_transcript	Gm36862	ENSMUST00000223365	lincRNA		12	1	17562925	642
ENSMUSG00000045678	protein_coding	Olfr1489	ENSMUST00000217182	protein_coding	principal1	19	1	13631621	11140
ENSMUSG00000113131	processed_pseudogene	Gm48290	ENSMUST00000222500	processed_pseudogene		12	-1	17568849	372
ENSMUSG00000026698	protein_coding	Pigc	ENSMUST00000160881	protein_coding		1	1	161969299	704
ENSMUSG00000030263	protein_coding	Lrmp	ENSMUST00000143631	retained_intron		6	1	145121781	1559
ENSMUSG00000024294	protein_coding	Mib1	ENSMUST00000052838	protein_coding	principal1	18	1	10725548	10231
ENSMUSG00000030263	protein_coding	Lrmp	ENSMUST00000152571	protein_coding		6	1	145137497	635
ENSMUSG00000026698	protein_coding	Pigc	ENSMUST00000159648	protein_coding		1	1	161969302	468
ENSMUSG00000045678	protein_coding	Olfr1489	ENSMUST00000053113	protein_coding	principal1	19	1	13632944	1111
ENSMUSG00000034685	protein_coding	Fam171a2	ENSMUST00000049057	protein_coding	principal1	11	-1	102447682	3118
ENSMUSG00000030263	protein_coding	Lrmp	ENSMUST00000125029	retained_intron		6	1	145145474	445
ENSMUSG00000101847	processed_pseudogene	Gm20749	ENSMUST00000186319	processed_pseudogene		7	-1	38606567	3492
ENSMUSG00000061387	protein_coding	Olfr1490	ENSMUST00000213900	protein_coding	alternative2	19	1	13651091	5165
ENSMUSG00000025007	protein_coding	Aldh18a1	ENSMUST00000176939	protein_coding	alternative1	19	-1	40588369	3427
ENSMUSG00000099981	unprocessed_pseudogene	Gm21136	ENSMUST00000186812	unprocessed_pseudogene		7	-1	38868000	2575
ENSMUSG00000061387	protein_coding	Olfr1490	ENSMUST00000216631	processed_transcript		19	1	13651091	2160
ENSMUSG00000034685	protein_coding	Fam171a2	ENSMUST00000145190	processed_transcript		11	-1	102439777	378
ENSMUSG00000024294	protein_coding	Mib1	ENSMUST00000131073	retained_intron		18	1	10725744	1665
ENSMUSG00000030263	protein_coding	Lrmp	ENSMUST00000156849	protein_coding		6	1	145145474	586
ENSMUSG00000061387	protein_coding	Olfr1490	ENSMUST00000080162	protein_coding	principal2	19	1	13654446	951
ENSMUSG00000024294	protein_coding	Mib1	ENSMUST00000234047	retained_intron		18	1	10726524	1828
ENSMUSG00000043629	protein_coding	1700019D03Rik	ENSMUST00000050567	protein_coding	principal1	1	-1	52952844	3641
ENSMUSG00000034685	protein_coding	Fam171a2	ENSMUST00000152015	processed_transcript		11	-1	102447594	372
ENSMUSG00000030263	protein_coding	Lrmp	ENSMUST00000132948	protein_coding		6	1	145145477	1761
ENSMUSG00000030263	protein_coding	Lrmp	ENSMUST00000132937	processed_transcript		6	1	145157747	820
ENSMUSG00000024294	protein_coding	Mib1	ENSMUST00000124288	protein_coding		18	1	10760809	2841
ENSMUSG00000083777	processed_pseudogene	Gm13361	ENSMUST00000119977	processed_pseudogene		2	-1	19967397	1431
ENSMUSG00000043629	protein_coding	1700019D03Rik	ENSMUST00000114492	protein_coding	principal1	1	-1	52953350	3565
ENSMUSG00000024294	protein_coding	Mib1	ENSMUST00000150000	protein_coding		18	1	10798365	2721
ENSMUSG00000086277	protein_coding	4930558K02Rik	ENSMUST00000162676	protein_coding	principal1	1	-1	161979636	983
ENSMUSG00000030263	protein_coding	Lrmp	ENSMUST00000135191	retained_intron		6	1	145169505	938
ENSMUSG00000085477	antisense	Gm13335	ENSMUST00000129994	antisense		2	-1	20426990	471
ENSMUSG00000085477	antisense	Gm13335	ENSMUST00000149398	antisense		2	-1	20432934	471
ENSMUSG00000060565	protein_coding	Gm5591	ENSMUST00000079759	protein_coding	principal1	7	-1	38528193	3441
ENSMUSG00000066867	protein_coding	Oas1e	ENSMUST00000100785	protein_coding	principal3	5	-1	120795530	1801
ENSMUSG00000043629	protein_coding	1700019D03Rik	ENSMUST00000114493	protein_coding	principal1	1	-1	52963260	3619
ENSMUSG00000024294	protein_coding	Mib1	ENSMUST00000165555	protein_coding	principal1	18	1	10725655	3216
ENSMUSG00000043629	protein_coding	1700019D03Rik	ENSMUST00000191441	protein_coding	principal1	1	-1	53020179	638
ENSMUSG00000094920	unprocessed_pseudogene	Gm6605	ENSMUST00000031488	unprocessed_pseudogene		7	-1	38450424	2574
ENSMUSG00000091457	antisense	Gm17171	ENSMUST00000168048	antisense		2	-1	20324670	534
ENSMUSG00000099765	unprocessed_pseudogene	Gm4454	ENSMUST00000190585	unprocessed_pseudogene		7	-1	38570962	2578
ENSMUSG00000066867	protein_coding	Oas1e	ENSMUST00000201172	protein_coding	alternative2	5	-1	120795503	1336
ENSMUSG00000081128	processed_pseudogene	Gm13328	ENSMUST00000120816	processed_pseudogene		2	-1	20236064	1020
ENSMUSG00000094233	unprocessed_pseudogene	Gm21276	ENSMUST00000179666	unprocessed_pseudogene		7	-1	38768184	2626
ENSMUSG00000028415	protein_coding	Spink4	ENSMUST00000030122	protein_coding	principal1	4	1	40920052	397
ENSMUSG00000099772	processed_pseudogene	Gm29085	ENSMUST00000187108	processed_pseudogene		7	1	38786161	225
ENSMUSG00000066108	protein_coding	Muc5b	ENSMUST00000165147	protein_coding	principal1	7	1	141839070	14964
ENSMUSG00000043629	protein_coding	1700019D03Rik	ENSMUST00000190831	protein_coding	principal1	1	-1	52992655	653
ENSMUSG00000100401	lincRNA	Gm29248	ENSMUST00000186074	lincRNA		Y	1	53527413	1498
ENSMUSG00000066867	protein_coding	Oas1e	ENSMUST00000200786	nonsense_mediated_decay		5	-1	120795512	756
ENSMUSG00000029260	protein_coding	Ugt2b34	ENSMUST00000031181	protein_coding	principal1	5	-1	86906937	3051
ENSMUSG00000028415	protein_coding	Spink4	ENSMUST00000132943	processed_transcript		4	1	40920054	223
ENSMUSG00000043629	protein_coding	1700019D03Rik	ENSMUST00000186266	protein_coding	principal1	1	-1	52972046	623
ENSMUSG00000114062	lincRNA	Gm48313	ENSMUST00000222977	lincRNA		12	-1	17605306	448
ENSMUSG00000029260	protein_coding	Ugt2b34	ENSMUST00000113333	protein_coding		5	-1	86906937	4312
ENSMUSG00000114062	lincRNA	Gm48313	ENSMUST00000222628	lincRNA		12	-1	17607231	1192
ENSMUSG00000043629	protein_coding	1700019D03Rik	ENSMUST00000190726	protein_coding	principal1	1	-1	52992656	702
ENSMUSG00000101855	transcribed_processed_pseudogene	1700010N08Rik	ENSMUST00000188166	processed_transcript		7	1	38791661	1323
ENSMUSG00000101855	transcribed_processed_pseudogene	1700010N08Rik	ENSMUST00000187456	transcribed_processed_pseudogene		7	1	38859624	189
ENSMUSG00000099846	unprocessed_pseudogene	Gm6819	ENSMUST00000185325	unprocessed_pseudogene		7	-1	38489862	1891
ENSMUSG00000081538	processed_pseudogene	Rps13-ps8	ENSMUST00000118906	processed_pseudogene		2	1	72545212	401
ENSMUSG00000100401	lincRNA	Gm29248	ENSMUST00000189397	lincRNA		Y	1	53527865	438
ENSMUSG00000100401	lincRNA	Gm29248	ENSMUST00000186502	lincRNA		Y	1	53527865	622
ENSMUSG00000100841	unprocessed_pseudogene	Gm21115	ENSMUST00000187565	unprocessed_pseudogene		7	-1	38723756	2578
ENSMUSG00000100810	processed_pseudogene	Gm29086	ENSMUST00000186774	processed_pseudogene		7	1	38606659	222
ENSMUSG00000101992	unprocessed_pseudogene	Gm29249	ENSMUST00000189647	unprocessed_pseudogene		Y	-1	53638825	696
ENSMUSG00000086277	protein_coding	4930558K02Rik	ENSMUST00000141397	processed_transcript		1	-1	161969148	1011
ENSMUSG00000025007	protein_coding	Aldh18a1	ENSMUST00000025979	protein_coding	principal3	19	-1	40588463	3527
ENSMUSG00000100169	antisense	Gm29087	ENSMUST00000186462	antisense		7	1	38500432	645
ENSMUSG00000066752	TEC	Gm10176	ENSMUST00000159707	TEC		1	1	162477680	2264
ENSMUSG00000101470	unprocessed_pseudogene	Gm21129	ENSMUST00000185932	unprocessed_pseudogene		7	-1	38820761	2560
ENSMUSG00000101665	unprocessed_pseudogene	Gm21920	ENSMUST00000190042	unprocessed_pseudogene		Y	-1	53713418	695
ENSMUSG00000025007	protein_coding	Aldh18a1	ENSMUST00000155613	retained_intron		19	-1	40554863	548
ENSMUSG00000100788	processed_pseudogene	Gm21122	ENSMUST00000191548	processed_pseudogene		7	-1	38786072	3452
ENSMUSG00000101367	unprocessed_pseudogene	Gm29484	ENSMUST00000186067	unprocessed_pseudogene		Y	1	53712724	324
ENSMUSG00000025007	protein_coding	Aldh18a1	ENSMUST00000175967	protein_coding		19	-1	40554741	344
ENSMUSG00000083849	processed_pseudogene	Gm13477	ENSMUST00000121620	processed_pseudogene		2	1	44788265	2687
ENSMUSG00000006850	protein_coding	Tmco6	ENSMUST00000007046	protein_coding	principal1	18	1	36735068	1823
ENSMUSG00000112857	lincRNA	Gm35041	ENSMUST00000219581	lincRNA		12	1	76972460	602
ENSMUSG00000006850	protein_coding	Tmco6	ENSMUST00000237870	protein_coding		18	1	36735075	992
ENSMUSG00000043541	protein_coding	Casc1	ENSMUST00000111727	retained_intron		6	-1	145205347	4308
ENSMUSG00000078190	antisense	Dnm3os	ENSMUST00000139662	antisense		1	1	162217623	7928
ENSMUSG00000054555	protein_coding	Adam12	ENSMUST00000067680	protein_coding	principal1	7	-1	134225097	7675
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000103212	protein_coding	principal1	4	-1	149426749	5626
ENSMUSG00000078190	antisense	Dnm3os	ENSMUST00000185878	antisense		1	1	162217723	660
ENSMUSG00000078190	antisense	Dnm3os	ENSMUST00000232506	antisense		1	1	162217839	494
ENSMUSG00000025007	protein_coding	Aldh18a1	ENSMUST00000134749	retained_intron		19	-1	40588423	2493
ENSMUSG00000054555	protein_coding	Adam12	ENSMUST00000138363	protein_coding		7	-1	133961265	3492
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000138181	nonsense_mediated_decay		4	-1	149335114	733
ENSMUSG00000078190	antisense	Dnm3os	ENSMUST00000231582	antisense		1	1	162217876	282
ENSMUSG00000078190	antisense	Dnm3os	ENSMUST00000231725	antisense		1	1	162219868	992
ENSMUSG00000039201	protein_coding	Tbc1d25	ENSMUST00000239441	protein_coding	principal1	X	-1	8176181	2648
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000239095	protein_coding		4	-1	149425985	5081
ENSMUSG00000078190	antisense	Dnm3os	ENSMUST00000178978	antisense		1	1	162217623	7926
ENSMUSG00000006850	protein_coding	Tmco6	ENSMUST00000237079	retained_intron		18	1	36735142	665
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000238439	protein_coding		4	-1	149425985	4943
ENSMUSG00000025007	protein_coding	Aldh18a1	ENSMUST00000176955	protein_coding		19	-1	40588384	356
ENSMUSG00000054555	protein_coding	Adam12	ENSMUST00000134504	protein_coding		7	-1	134232005	647
ENSMUSG00000103393	antisense	Gm38304	ENSMUST00000161826	antisense		1	1	161969200	600
ENSMUSG00000039201	protein_coding	Tbc1d25	ENSMUST00000133093	retained_intron		X	-1	8175958	2560
ENSMUSG00000006850	protein_coding	Tmco6	ENSMUST00000237255	retained_intron		18	1	36735160	613
ENSMUSG00000054555	protein_coding	Adam12	ENSMUST00000127524	protein_coding		7	-1	134232146	630
ENSMUSG00000081125	processed_pseudogene	Rpl26-ps5	ENSMUST00000122220	processed_pseudogene		2	1	142570508	439
ENSMUSG00000039201	protein_coding	Tbc1d25	ENSMUST00000143984	protein_coding		X	-1	8175891	2184
ENSMUSG00000020605	protein_coding	Hs1bp3	ENSMUST00000220199	protein_coding		12	1	8313432	361
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000155968	processed_transcript		4	-1	149331832	896
ENSMUSG00000039201	protein_coding	Tbc1d25	ENSMUST00000039892	protein_coding		X	-1	8176181	2648
ENSMUSG00000021244	protein_coding	Ylpm1	ENSMUST00000168977	protein_coding	alternative2	12	1	84996321	4893
ENSMUSG00000054555	protein_coding	Adam12	ENSMUST00000206313	retained_intron		7	-1	134172944	1043
ENSMUSG00000025007	protein_coding	Aldh18a1	ENSMUST00000149476	protein_coding		19	-1	40588410	650
ENSMUSG00000006850	protein_coding	Tmco6	ENSMUST00000237559	retained_intron		18	1	36735167	732
ENSMUSG00000083215	processed_pseudogene	Rbmx2-ps	ENSMUST00000119377	processed_pseudogene		2	1	142576928	930
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000123687	nonsense_mediated_decay		11	1	70016942	2888
ENSMUSG00000054555	protein_coding	Adam12	ENSMUST00000206426	processed_transcript		7	-1	134232131	1463
ENSMUSG00000025007	protein_coding	Aldh18a1	ENSMUST00000175932	protein_coding		19	-1	40588382	463
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000174343	nonsense_mediated_decay		4	-1	149425905	3407
ENSMUSG00000054555	protein_coding	Adam12	ENSMUST00000154144	processed_transcript		7	-1	134225372	675
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000172836	nonsense_mediated_decay		4	-1	149425905	3554
ENSMUSG00000096592	processed_pseudogene	Gm15801	ENSMUST00000120920	processed_pseudogene		19	-1	40561058	522
ENSMUSG00000039201	protein_coding	Tbc1d25	ENSMUST00000172020	protein_coding		X	-1	8176181	2441
ENSMUSG00000108478	TEC	Gm19514	ENSMUST00000206856	TEC		7	-1	134100278	4489
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000153430	processed_transcript		4	-1	149336108	505
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000136732	retained_intron		4	-1	149351706	277
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000108589	protein_coding		11	1	70016942	3414
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000114338	protein_coding	alternative1	5	1	34573664	4007
ENSMUSG00000050066	processed_transcript	A130023I24Rik	ENSMUST00000152709	sense_intronic		7	-1	134230705	1897
ENSMUSG00000014294	protein_coding	Ndufa2	ENSMUST00000014438	protein_coding	principal1	18	-1	36744557	572
ENSMUSG00000001166	protein_coding	Oas1c	ENSMUST00000117193	protein_coding	principal1	5	-1	120812514	2291
ENSMUSG00000021244	protein_coding	Ylpm1	ENSMUST00000021670	protein_coding	principal2	12	1	84996352	7003
ENSMUSG00000050066	processed_transcript	A130023I24Rik	ENSMUST00000206697	retained_intron		7	-1	134229320	1768
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000084123	retained_intron		4	-1	149426631	2030
ENSMUSG00000070778	processed_pseudogene	Rpl7a-ps8	ENSMUST00000094754	processed_pseudogene		7	1	19953783	801
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000172643	processed_transcript		4	-1	149426600	942
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000138027	processed_transcript		4	-1	149387662	373
ENSMUSG00000001166	protein_coding	Oas1c	ENSMUST00000125547	protein_coding		5	-1	120812488	416
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000173005	retained_intron		4	-1	149426216	621
ENSMUSG00000001166	protein_coding	Oas1c	ENSMUST00000130045	processed_transcript		5	-1	120812514	782
ENSMUSG00000028960	protein_coding	Ube4b	ENSMUST00000131986	processed_transcript		4	-1	149399378	446
ENSMUSG00000107179	antisense	Gm43069	ENSMUST00000201006	antisense		5	1	120777796	859
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000147574	protein_coding		5	1	34573765	872
ENSMUSG00000107888	processed_pseudogene	Gm44138	ENSMUST00000204939	processed_pseudogene		6	1	132760705	271
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000146295	protein_coding		5	1	34573769	767
ENSMUSG00000089953	protein_coding	Rnf224	ENSMUST00000091318	protein_coding	principal1	2	-1	25236787	2021
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000145986	processed_transcript		5	1	34573804	412
ENSMUSG00000089953	protein_coding	Rnf224	ENSMUST00000205192	protein_coding	principal1	2	-1	25236689	1707
ENSMUSG00000056901	protein_coding	Tas2r102	ENSMUST00000069268	protein_coding	principal1	6	1	132762131	1044
ENSMUSG00000004099	protein_coding	Dnmt1	ENSMUST00000178110	protein_coding	alternative2	9	-1	20952623	5870
ENSMUSG00000020605	protein_coding	Hs1bp3	ENSMUST00000020927	protein_coding	principal1	12	1	8313432	2959
ENSMUSG00000053217	protein_coding	Tas2r136	ENSMUST00000065532	protein_coding	principal1	6	-1	132778162	984
ENSMUSG00000107592	unprocessed_pseudogene	Tas2r145-ps3	ENSMUST00000204526	unprocessed_pseudogene		6	1	132786736	992
ENSMUSG00000020605	protein_coding	Hs1bp3	ENSMUST00000220300	protein_coding		12	1	8317611	583
ENSMUSG00000111889	antisense	Gm48071	ENSMUST00000217669	antisense		12	-1	8336717	773
ENSMUSG00000021244	protein_coding	Ylpm1	ENSMUST00000164558	nonsense_mediated_decay		12	1	85014701	5416
ENSMUSG00000001418	protein_coding	Glmp	ENSMUST00000177005	protein_coding	principal1	3	1	88325023	4219
ENSMUSG00000030376	protein_coding	Slc8a2	ENSMUST00000211649	protein_coding	principal3	7	1	16129826	5261
ENSMUSG00000021244	protein_coding	Ylpm1	ENSMUST00000169150	retained_intron		12	1	85042227	3002
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000001108	protein_coding	alternative1	5	1	34573863	3898
ENSMUSG00000021244	protein_coding	Ylpm1	ENSMUST00000165803	retained_intron		12	1	85049690	596
ENSMUSG00000001418	protein_coding	Glmp	ENSMUST00000193646	retained_intron		3	1	88325055	4457
ENSMUSG00000030376	protein_coding	Slc8a2	ENSMUST00000168693	protein_coding	alternative2	7	1	16130348	4171
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000133140	processed_transcript		11	1	70017241	649
ENSMUSG00000021244	protein_coding	Ylpm1	ENSMUST00000167838	retained_intron		12	1	85059960	812
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000108586	processed_transcript		11	1	70017275	413
ENSMUSG00000001418	protein_coding	Glmp	ENSMUST00000153716	retained_intron		3	1	88325058	948
ENSMUSG00000021244	protein_coding	Ylpm1	ENSMUST00000166605	retained_intron		12	1	85064679	915
ENSMUSG00000001418	protein_coding	Glmp	ENSMUST00000152801	retained_intron		3	1	88325060	2430
ENSMUSG00000021244	protein_coding	Ylpm1	ENSMUST00000101202	protein_coding	alternative2	12	1	84996490	4605
ENSMUSG00000004099	protein_coding	Dnmt1	ENSMUST00000004202	protein_coding	principal4	9	-1	20952979	5367
ENSMUSG00000001418	protein_coding	Glmp	ENSMUST00000131666	nonsense_mediated_decay		3	1	88325072	470
ENSMUSG00000024650	protein_coding	Slc22a6	ENSMUST00000010250	protein_coding	principal1	19	1	8618039	3983
ENSMUSG00000004099	protein_coding	Dnmt1	ENSMUST00000177754	protein_coding	alternative2	9	-1	20959888	5248
ENSMUSG00000001418	protein_coding	Glmp	ENSMUST00000176519	protein_coding		3	1	88325082	447
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000112810	protein_coding	principal1	2	-1	44861622	2564
ENSMUSG00000001418	protein_coding	Glmp	ENSMUST00000001454	protein_coding		3	1	88325082	1017
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000090823	protein_coding	alternative2	3	1	95160505	4029
ENSMUSG00000001418	protein_coding	Glmp	ENSMUST00000176425	protein_coding		3	1	88325082	960
ENSMUSG00000004099	protein_coding	Dnmt1	ENSMUST00000214964	retained_intron		9	-1	20908979	1252
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000114340	protein_coding	principal3	5	1	34573873	3761
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000142449	nonsense_mediated_decay		3	1	95160505	3936
ENSMUSG00000001418	protein_coding	Glmp	ENSMUST00000140039	retained_intron		3	1	88326044	861
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000231415	protein_coding	alternative1	11	1	70018441	5472
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000134125	retained_intron		3	1	95160505	5095
ENSMUSG00000001418	protein_coding	Glmp	ENSMUST00000154381	protein_coding		3	1	88328073	447
ENSMUSG00000004099	protein_coding	Dnmt1	ENSMUST00000216540	protein_coding	alternative2	9	-1	20952605	5543
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000090821	protein_coding	principal3	3	1	95160505	3933
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000129240	processed_transcript		2	-1	44927264	2882
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000148279	protein_coding		2	-1	44927657	677
ENSMUSG00000036731	protein_coding	Cysrt1	ENSMUST00000043379	protein_coding	principal1	2	-1	25239988	873
ENSMUSG00000014361	protein_coding	Mertk	ENSMUST00000014505	protein_coding	principal1	2	1	128698956	4302
ENSMUSG00000036023	protein_coding	Parp2	ENSMUST00000036126	protein_coding	principal1	14	1	50807841	1894
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000143766	processed_transcript		2	-1	44927234	638
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000154744	protein_coding		2	-1	44862275	571
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000133442	processed_transcript		2	-1	44927149	646
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000146694	protein_coding		2	-1	44862275	652
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000114335	protein_coding	alternative1	5	1	34574042	4547
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000130991	protein_coding		2	-1	44927161	784
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000201368	retained_intron		5	1	34596340	2774
ENSMUSG00000036731	protein_coding	Cysrt1	ENSMUST00000186719	protein_coding	principal1	2	-1	25239897	909
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000031726	protein_coding	principal1	5	-1	137533510	1860
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000148786	processed_transcript		2	-1	44825403	547
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000108588	protein_coding	principal3	11	1	70018444	3488
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000052836	protein_coding	alternative1	5	1	34601342	2337
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000143333	processed_transcript		2	-1	44571714	643
ENSMUSG00000040624	protein_coding	Plekhg1	ENSMUST00000120274	protein_coding	principal2	10	1	3740364	7369
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000135321	protein_coding		5	1	34614247	407
ENSMUSG00000036731	protein_coding	Cysrt1	ENSMUST00000114356	protein_coding		2	-1	25242452	509
ENSMUSG00000014361	protein_coding	Mertk	ENSMUST00000140221	processed_transcript		2	1	128771313	2744
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000167225	retained_intron		5	-1	137528920	712
ENSMUSG00000004099	protein_coding	Dnmt1	ENSMUST00000215545	processed_transcript		9	-1	20952845	607
ENSMUSG00000085036	antisense	Gm14011	ENSMUST00000145178	antisense		2	-1	128753705	302
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000134813	processed_transcript		2	-1	44571347	629
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000144226	retained_intron		5	1	34616626	698
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000168321	protein_coding	alternative2	3	1	95164306	3553
ENSMUSG00000004099	protein_coding	Dnmt1	ENSMUST00000216135	retained_intron		9	-1	20937189	693
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000232002	protein_coding		11	1	70018834	931
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000201810	protein_coding		5	1	34616767	745
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000107217	protein_coding		3	1	95164306	3595
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000100127	protein_coding		2	-1	44927236	2422
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000134376	protein_coding		11	1	70018861	773
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000143495	protein_coding		5	-1	137533231	1285
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000130662	processed_transcript		3	1	95168212	890
ENSMUSG00000036023	protein_coding	Parp2	ENSMUST00000226880	retained_intron		14	1	50807925	1756
ENSMUSG00000036890	protein_coding	Gtdc1	ENSMUST00000049051	protein_coding		2	-1	44756437	2197
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000152805	protein_coding		5	1	34619354	2370
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000141607	retained_intron		3	1	95170323	788
ENSMUSG00000036023	protein_coding	Parp2	ENSMUST00000227705	processed_transcript		14	1	50807926	342
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000126597	retained_intron		3	1	95170805	814
ENSMUSG00000100093	processed_pseudogene	Gm29649	ENSMUST00000185649	processed_pseudogene		1	-1	16758623	419
ENSMUSG00000028567	protein_coding	Txndc12	ENSMUST00000030296	protein_coding	principal1	4	1	108834601	1359
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000137262	retained_intron		5	1	34619849	814
ENSMUSG00000025223	protein_coding	Ldb1	ENSMUST00000156585	protein_coding	alternative1	19	-1	46045210	3133
ENSMUSG00000026390	protein_coding	Marco	ENSMUST00000027639	protein_coding	principal1	1	-1	120505024	1925
ENSMUSG00000038777	protein_coding	Sema6c	ENSMUST00000202315	protein_coding	principal3	3	1	95164374	2843
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000231221	protein_coding		11	1	70018879	6326
ENSMUSG00000029106	protein_coding	Add1	ENSMUST00000139044	retained_intron		5	1	34619971	650
ENSMUSG00000001420	protein_coding	Tmem79	ENSMUST00000001456	protein_coding	principal1	3	-1	88334504	2406
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000139748	processed_transcript		7	1	143823145	682
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000124568	protein_coding		11	1	70023920	540
ENSMUSG00000107128	TEC	Gm42867	ENSMUST00000202995	TEC		5	1	34575088	469
ENSMUSG00000021686	protein_coding	Ap3b1	ENSMUST00000022196	protein_coding	principal1	13	1	94358960	4021
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000111023	protein_coding		5	-1	137533301	1471
ENSMUSG00000026390	protein_coding	Marco	ENSMUST00000186432	protein_coding		1	-1	120504756	370
ENSMUSG00000028567	protein_coding	Txndc12	ENSMUST00000147581	processed_transcript		4	1	108834635	744
ENSMUSG00000111438	processed_pseudogene	Rps2-ps12	ENSMUST00000214262	processed_pseudogene		9	1	30512940	785
ENSMUSG00000028567	protein_coding	Txndc12	ENSMUST00000154017	processed_transcript		4	1	108857492	511
ENSMUSG00000111413	lincRNA	Gm47716	ENSMUST00000216883	lincRNA		9	-1	30632587	565
ENSMUSG00000040624	protein_coding	Plekhg1	ENSMUST00000144543	retained_intron		10	1	3740378	1854
ENSMUSG00000021686	protein_coding	Ap3b1	ENSMUST00000231916	protein_coding		13	1	94472863	2008
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000111027	protein_coding		5	-1	137531758	1610
ENSMUSG00000004642	protein_coding	Slbp	ENSMUST00000075670	protein_coding	alternative2	5	-1	33652345	1027
ENSMUSG00000001420	protein_coding	Tmem79	ENSMUST00000107553	protein_coding	principal1	3	-1	88334268	2053
ENSMUSG00000040624	protein_coding	Plekhg1	ENSMUST00000137111	retained_intron		10	1	3740665	2016
ENSMUSG00000073775	protein_coding	Kti12	ENSMUST00000102738	protein_coding	principal1	4	1	108847785	1629
ENSMUSG00000111249	processed_pseudogene	Gm47717	ENSMUST00000215919	processed_pseudogene		9	-1	30752882	262
ENSMUSG00000036023	protein_coding	Parp2	ENSMUST00000228672	retained_intron		14	1	50807946	2173
ENSMUSG00000040624	protein_coding	Plekhg1	ENSMUST00000239159	protein_coding	alternative2	10	1	3834879	4478
ENSMUSG00000111867	lincRNA	Gm31013	ENSMUST00000213576	lincRNA		9	-1	30781479	715
ENSMUSG00000040624	protein_coding	Plekhg1	ENSMUST00000238840	retained_intron		10	1	3834964	1016
ENSMUSG00000021686	protein_coding	Ap3b1	ENSMUST00000222383	processed_transcript		13	1	94528339	579
ENSMUSG00000001420	protein_coding	Tmem79	ENSMUST00000107552	protein_coding	principal1	3	-1	88334454	2063
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000128454	protein_coding		7	1	143823167	543
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000208535	retained_intron		7	1	143828897	2231
ENSMUSG00000036023	protein_coding	Parp2	ENSMUST00000227810	nonsense_mediated_decay		14	1	50814870	737
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000111020	protein_coding		5	-1	137533297	1470
ENSMUSG00000040624	protein_coding	Plekhg1	ENSMUST00000136671	protein_coding		10	1	3872667	4436
ENSMUSG00000001420	protein_coding	Tmem79	ENSMUST00000193872	protein_coding		3	-1	88336148	791
ENSMUSG00000021686	protein_coding	Ap3b1	ENSMUST00000221206	processed_transcript		13	1	94532006	413
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000239431	protein_coding	alternative2	11	1	102430315	2340
ENSMUSG00000040624	protein_coding	Plekhg1	ENSMUST00000131525	retained_intron		10	1	3903582	303
ENSMUSG00000036023	protein_coding	Parp2	ENSMUST00000228624	retained_intron		14	1	50818908	503
ENSMUSG00000044408	protein_coding	Sptssa	ENSMUST00000056228	protein_coding	principal1	12	-1	54656573	1346
ENSMUSG00000021686	protein_coding	Ap3b1	ENSMUST00000220505	processed_transcript		13	1	94542303	364
ENSMUSG00000036023	protein_coding	Parp2	ENSMUST00000228833	retained_intron		14	1	50819345	220
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000129997	protein_coding		11	1	102430518	834
ENSMUSG00000040624	protein_coding	Plekhg1	ENSMUST00000154727	protein_coding		10	1	3903586	5405
ENSMUSG00000036023	protein_coding	Parp2	ENSMUST00000228872	retained_intron		14	1	50820279	423
ENSMUSG00000004642	protein_coding	Slbp	ENSMUST00000101354	protein_coding	alternative2	5	-1	33652306	1578
ENSMUSG00000080865	processed_pseudogene	Eif1-ps3	ENSMUST00000121450	processed_pseudogene		2	-1	72570822	342
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000135517	retained_intron		11	1	102432785	762
ENSMUSG00000040624	protein_coding	Plekhg1	ENSMUST00000141367	nonsense_mediated_decay		10	1	3957891	638
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000150063	protein_coding	principal1	5	-1	137531297	1569
ENSMUSG00000044408	protein_coding	Sptssa	ENSMUST00000218147	nonsense_mediated_decay		12	-1	54656496	788
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000168746	protein_coding		5	-1	137533184	802
ENSMUSG00000005763	protein_coding	Cd247	ENSMUST00000161971	protein_coding		1	1	165788681	2713
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000170293	protein_coding		5	-1	137533204	993
ENSMUSG00000083279	processed_pseudogene	Pex13-ps	ENSMUST00000118184	processed_pseudogene		2	1	72632270	1157
ENSMUSG00000044408	protein_coding	Sptssa	ENSMUST00000220090	processed_transcript		12	-1	54656198	632
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000148580	retained_intron		11	1	102433932	444
ENSMUSG00000040624	protein_coding	Plekhg1	ENSMUST00000042438	protein_coding	principal2	10	1	3872667	7190
ENSMUSG00000110244	processed_pseudogene	Gm2253	ENSMUST00000211775	processed_pseudogene		8	1	78604294	414
ENSMUSG00000025207	protein_coding	Sema4g	ENSMUST00000026225	protein_coding	principal1	19	1	44989101	4548
ENSMUSG00000035836	protein_coding	Ugt2b1	ENSMUST00000031183	protein_coding	principal1	5	-1	86926530	2573
ENSMUSG00000082123	processed_pseudogene	Gm16149	ENSMUST00000117631	processed_pseudogene		10	-1	3869607	309
ENSMUSG00000081957	processed_pseudogene	Ak3l2-ps	ENSMUST00000120282	processed_pseudogene		2	1	72633936	672
ENSMUSG00000113096	lincRNA	Gm40884	ENSMUST00000223505	lincRNA		12	1	54658820	541
ENSMUSG00000004642	protein_coding	Slbp	ENSMUST00000057551	protein_coding	principal3	5	-1	33652574	1906
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000176953	retained_intron		11	1	102434099	760
ENSMUSG00000082605	processed_pseudogene	Gm16148	ENSMUST00000119653	processed_pseudogene		10	-1	3947091	893
ENSMUSG00000019066	protein_coding	Rab3d	ENSMUST00000115351	protein_coding	principal1	9	-1	21918192	3835
ENSMUSG00000025223	protein_coding	Ldb1	ENSMUST00000152946	protein_coding	alternative1	19	-1	46045214	2108
ENSMUSG00000025207	protein_coding	Sema4g	ENSMUST00000236662	processed_transcript		19	1	44989160	747
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000135916	protein_coding		11	1	70026824	404
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000138451	retained_intron		11	1	102434102	668
ENSMUSG00000034227	protein_coding	Foxj1	ENSMUST00000036215	protein_coding	principal1	11	-1	116335399	2623
ENSMUSG00000091020	processed_pseudogene	Gm5828	ENSMUST00000071842	processed_pseudogene		1	-1	16770138	1860
ENSMUSG00000039220	protein_coding	Ppp1r10	ENSMUST00000154856	retained_intron		17	1	35916434	732
ENSMUSG00000004642	protein_coding	Slbp	ENSMUST00000146889	retained_intron		5	-1	33642162	805
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000149036	processed_transcript		2	1	119208617	524
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000123500	retained_intron		11	1	102434718	921
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000232659	protein_coding		11	1	70026999	389
ENSMUSG00000114016	TEC	Gm47258	ENSMUST00000221365	TEC		13	1	65289453	1342
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000125819	protein_coding		11	1	102435285	845
ENSMUSG00000025223	protein_coding	Ldb1	ENSMUST00000056931	protein_coding	principal3	19	-1	46039621	2295
ENSMUSG00000005763	protein_coding	Cd247	ENSMUST00000005907	protein_coding	principal1	1	1	165788689	1632
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000127530	retained_intron		11	1	102435306	542
ENSMUSG00000025207	protein_coding	Sema4g	ENSMUST00000238104	retained_intron		19	1	44989261	1371
ENSMUSG00000025207	protein_coding	Sema4g	ENSMUST00000237987	retained_intron		19	1	44989291	1857
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000177428	protein_coding		11	1	102435416	1235
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000142252	retained_intron		5	-1	137530899	1383
ENSMUSG00000005763	protein_coding	Cd247	ENSMUST00000027849	protein_coding		1	1	165788723	1317
ENSMUSG00000004642	protein_coding	Slbp	ENSMUST00000148153	retained_intron		5	-1	33652338	1128
ENSMUSG00000051998	protein_coding	Lax1	ENSMUST00000169295	protein_coding	principal1	1	-1	133690108	2309
ENSMUSG00000025223	protein_coding	Ldb1	ENSMUST00000026252	protein_coding	principal3	19	-1	46044914	1718
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000125868	retained_intron		5	-1	137529862	918
ENSMUSG00000004642	protein_coding	Slbp	ENSMUST00000139518	protein_coding	alternative2	5	-1	33652300	1191
ENSMUSG00000019066	protein_coding	Rab3d	ENSMUST00000122211	protein_coding	principal1	9	-1	21918139	3886
ENSMUSG00000004642	protein_coding	Slbp	ENSMUST00000151081	protein_coding		5	-1	33652296	508
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000144667	retained_intron		5	-1	137529820	599
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000231452	protein_coding		11	1	70027788	2584
ENSMUSG00000051998	protein_coding	Lax1	ENSMUST00000189524	protein_coding		1	-1	133690086	628
ENSMUSG00000019066	protein_coding	Rab3d	ENSMUST00000154019	retained_intron		9	-1	21918121	429
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000145238	retained_intron		5	-1	137529776	715
ENSMUSG00000025105	protein_coding	Bnc1	ENSMUST00000026096	protein_coding	principal1	7	-1	81992307	4680
ENSMUSG00000025223	protein_coding	Ldb1	ENSMUST00000137771	protein_coding		19	-1	46039481	2014
ENSMUSG00000004642	protein_coding	Slbp	ENSMUST00000143029	retained_intron		5	-1	33652353	2922
ENSMUSG00000025207	protein_coding	Sema4g	ENSMUST00000130549	nonsense_mediated_decay		19	1	44989291	4552
ENSMUSG00000005763	protein_coding	Cd247	ENSMUST00000086002	nonsense_mediated_decay		1	1	165788765	814
ENSMUSG00000004642	protein_coding	Slbp	ENSMUST00000126581	retained_intron		5	-1	33652301	562
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000132525	protein_coding		5	-1	137531038	836
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000231628	protein_coding		11	1	70029487	2416
ENSMUSG00000025207	protein_coding	Sema4g	ENSMUST00000235312	retained_intron		19	1	44989315	4099
ENSMUSG00000019066	protein_coding	Rab3d	ENSMUST00000128442	protein_coding		9	-1	21918089	545
ENSMUSG00000025207	protein_coding	Sema4g	ENSMUST00000235970	processed_transcript		19	1	44989338	636
ENSMUSG00000019066	protein_coding	Rab3d	ENSMUST00000119055	protein_coding		9	-1	21918117	694
ENSMUSG00000025223	protein_coding	Ldb1	ENSMUST00000126320	retained_intron		19	-1	46034878	907
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000088761	protein_coding	alternative2	5	-1	8367982	9077
ENSMUSG00000106834	TEC	Gm10459	ENSMUST00000202708	TEC		5	1	33652101	1155
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000018700	protein_coding		11	1	70029525	2708
ENSMUSG00000029713	protein_coding	Gnb2	ENSMUST00000140139	protein_coding		5	-1	137531952	1077
ENSMUSG00000005763	protein_coding	Cd247	ENSMUST00000161559	protein_coding		1	1	165788765	1816
ENSMUSG00000025223	protein_coding	Ldb1	ENSMUST00000136203	retained_intron		19	-1	46036000	900
ENSMUSG00000025207	protein_coding	Sema4g	ENSMUST00000179305	protein_coding	principal1	19	1	44992136	4290
ENSMUSG00000085252	lincRNA	8430437L04Rik	ENSMUST00000124829	lincRNA		2	1	72703510	1663
ENSMUSG00000033453	protein_coding	Adamts15	ENSMUST00000065112	protein_coding	principal1	9	-1	30922452	5928
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000232266	protein_coding		11	1	70029716	764
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000097566	protein_coding	principal3	18	-1	60624336	5060
ENSMUSG00000041343	protein_coding	Ankrd42	ENSMUST00000056106	protein_coding	alternative2	7	-1	92637102	2788
ENSMUSG00000105851	lincRNA	9130604C24Rik	ENSMUST00000197965	lincRNA		5	1	137502673	956
ENSMUSG00000025223	protein_coding	Ldb1	ENSMUST00000185355	protein_coding	alternative1	19	-1	46045211	2088
ENSMUSG00000033453	protein_coding	Adamts15	ENSMUST00000217070	retained_intron		9	-1	30909657	4463
ENSMUSG00000090873	antisense	Gm17112	ENSMUST00000163194	antisense		5	1	137532423	432
ENSMUSG00000112030	lincRNA	Gm35189	ENSMUST00000219319	lincRNA		12	-1	77042201	789
ENSMUSG00000005763	protein_coding	Cd247	ENSMUST00000159070	retained_intron		1	1	165858216	908
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000132597	protein_coding		11	1	70029817	775
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000115386	protein_coding	alternative2	5	-1	8367982	9056
ENSMUSG00000033453	protein_coding	Adamts15	ENSMUST00000216215	protein_coding		9	-1	30920950	354
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000050166	protein_coding	alternative2	5	-1	8367982	8969
ENSMUSG00000029715	protein_coding	Pop7	ENSMUST00000111035	protein_coding	principal1	5	-1	137502425	988
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000130044	protein_coding	principal3	18	-1	60624573	4970
ENSMUSG00000021597	protein_coding	Slf1	ENSMUST00000151524	protein_coding	principal1	13	-1	77135473	3747
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000103114	protein_coding	alternative1	11	-1	100939404	6042
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000134015	processed_transcript		19	1	46044886	405
ENSMUSG00000005763	protein_coding	Cd247	ENSMUST00000162411	processed_transcript		1	1	165864655	822
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000124121	protein_coding		5	-1	8121095	1601
ENSMUSG00000115812	transcribed_processed_pseudogene	Gm49309	ENSMUST00000226532	processed_transcript		14	1	31801559	1853
ENSMUSG00000043541	protein_coding	Casc1	ENSMUST00000111728	protein_coding	alternative2	6	-1	145210791	2682
ENSMUSG00000034708	protein_coding	Grn	ENSMUST00000049460	protein_coding	principal2	11	1	102430322	2331
ENSMUSG00000115812	transcribed_processed_pseudogene	Gm49309	ENSMUST00000228722	transcribed_processed_pseudogene		14	1	31802869	397
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000143920	protein_coding		11	1	70030023	807
ENSMUSG00000041343	protein_coding	Ankrd42	ENSMUST00000118157	protein_coding	principal2	7	-1	92637142	2782
ENSMUSG00000021514	protein_coding	Zfp369	ENSMUST00000126879	protein_coding	principal1	13	1	65278814	2909
ENSMUSG00000021597	protein_coding	Slf1	ENSMUST00000162005	retained_intron		13	-1	77047397	531
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000130360	protein_coding	alternative2	18	-1	60629853	5159
ENSMUSG00000005763	protein_coding	Cd247	ENSMUST00000187313	protein_coding		1	1	165788681	2957
ENSMUSG00000115210	TEC	Gm49308	ENSMUST00000227034	TEC		14	-1	31754414	3612
ENSMUSG00000021514	protein_coding	Zfp369	ENSMUST00000130799	protein_coding		13	1	65278814	1580
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000232115	protein_coding		11	1	70030155	913
ENSMUSG00000005763	protein_coding	Cd247	ENSMUST00000178336	protein_coding		1	1	165788681	2807
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000128528	processed_transcript		18	-1	60600497	2601
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000211332	processed_transcript		8	1	78509346	3517
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000138004	retained_intron		11	1	70030637	637
ENSMUSG00000102154	antisense	Gm37469	ENSMUST00000193728	antisense		1	-1	165849044	890
ENSMUSG00000029715	protein_coding	Pop7	ENSMUST00000031728	protein_coding	principal1	5	-1	137502518	881
ENSMUSG00000021514	protein_coding	Zfp369	ENSMUST00000125510	retained_intron		13	1	65278852	2911
ENSMUSG00000020886	protein_coding	Dlg4	ENSMUST00000131497	retained_intron		11	1	70044197	301
ENSMUSG00000021597	protein_coding	Slf1	ENSMUST00000162921	nonsense_mediated_decay		13	-1	77135465	1095
ENSMUSG00000021514	protein_coding	Zfp369	ENSMUST00000155732	protein_coding		13	1	65278903	453
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000155195	protein_coding	alternative2	18	-1	60624236	4442
ENSMUSG00000021597	protein_coding	Slf1	ENSMUST00000162944	nonsense_mediated_decay		13	-1	77135465	1774
ENSMUSG00000021514	protein_coding	Zfp369	ENSMUST00000222364	retained_intron		13	1	65302406	1815
ENSMUSG00000021597	protein_coding	Slf1	ENSMUST00000159300	protein_coding		13	-1	77131276	900
ENSMUSG00000064090	protein_coding	Vrk2	ENSMUST00000109504	protein_coding	principal1	11	-1	26591729	1642
ENSMUSG00000106237	lincRNA	Gm8066	ENSMUST00000197762	lincRNA		5	1	137510253	485
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000224056	protein_coding	alternative2	18	1	65430938	4113
ENSMUSG00000019295	protein_coding	Tmem129	ENSMUST00000019439	protein_coding	principal1	5	-1	33658416	2828
ENSMUSG00000105905	processed_pseudogene	Gm7709	ENSMUST00000199391	processed_pseudogene		5	1	88062516	1858
ENSMUSG00000106660	processed_pseudogene	Gm43472	ENSMUST00000200175	processed_pseudogene		3	-1	53347229	154
ENSMUSG00000021597	protein_coding	Slf1	ENSMUST00000159462	protein_coding		13	-1	77135438	1454
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000224930	protein_coding	alternative2	14	1	20348162	2716
ENSMUSG00000104640	processed_pseudogene	Gm42623	ENSMUST00000197225	processed_pseudogene		5	1	88070946	379
ENSMUSG00000105397	processed_pseudogene	Gm43471	ENSMUST00000197550	processed_pseudogene		3	-1	53402197	467
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000115318	protein_coding	alternative2	18	-1	60610105	4479
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000225597	nonsense_mediated_decay		14	1	20348184	742
ENSMUSG00000019295	protein_coding	Tmem129	ENSMUST00000140931	retained_intron		5	-1	33657899	2369
ENSMUSG00000101640	antisense	Gm28376	ENSMUST00000186604	antisense		1	1	16898185	176
ENSMUSG00000019295	protein_coding	Tmem129	ENSMUST00000200849	protein_coding		5	-1	33655486	657
ENSMUSG00000021597	protein_coding	Slf1	ENSMUST00000162320	retained_intron		13	-1	77135460	1241
ENSMUSG00000041343	protein_coding	Ankrd42	ENSMUST00000126305	nonsense_mediated_decay		7	-1	92637136	2802
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000224110	protein_coding		14	1	20348190	464
ENSMUSG00000104133	TEC	4921511E07Rik	ENSMUST00000194790	TEC		1	1	16930970	827
ENSMUSG00000064090	protein_coding	Vrk2	ENSMUST00000155728	retained_intron		11	-1	26593923	3127
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000143275	protein_coding	alternative2	18	-1	60648319	5040
ENSMUSG00000041343	protein_coding	Ankrd42	ENSMUST00000138215	retained_intron		7	-1	92610064	735
ENSMUSG00000043541	protein_coding	Casc1	ENSMUST00000060797	protein_coding	principal2	6	-1	145210970	2572
ENSMUSG00000042686	protein_coding	Jph1	ENSMUST00000186024	nonsense_mediated_decay		1	-1	17004219	614
ENSMUSG00000064090	protein_coding	Vrk2	ENSMUST00000124294	retained_intron		11	-1	26593622	2184
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000123288	protein_coding		18	-1	60623325	477
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000049248	protein_coding	principal2	18	1	65430949	5331
ENSMUSG00000026650	protein_coding	Meig1	ENSMUST00000115082	protein_coding	principal1	2	-1	3419129	603
ENSMUSG00000019295	protein_coding	Tmem129	ENSMUST00000125527	retained_intron		5	-1	33657856	825
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000160395	processed_transcript		18	-1	60624262	418
ENSMUSG00000043541	protein_coding	Casc1	ENSMUST00000204105	protein_coding	alternative2	6	-1	145210874	2425
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000219003	protein_coding		10	-1	12548879	5751
ENSMUSG00000043541	protein_coding	Casc1	ENSMUST00000152138	retained_intron		6	-1	145210899	2121
ENSMUSG00000064090	protein_coding	Vrk2	ENSMUST00000156264	protein_coding		11	-1	26593999	386
ENSMUSG00000041343	protein_coding	Ankrd42	ENSMUST00000142971	retained_intron		7	-1	92637035	3542
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000137894	processed_transcript		18	-1	60660142	1926
ENSMUSG00000043541	protein_coding	Casc1	ENSMUST00000133671	processed_transcript		6	-1	145210869	595
ENSMUSG00000064090	protein_coding	Vrk2	ENSMUST00000125545	processed_transcript		11	-1	26593603	551
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000224265	nonsense_mediated_decay		18	1	65430962	1834
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000154857	processed_transcript		18	-1	60648272	642
ENSMUSG00000041343	protein_coding	Ankrd42	ENSMUST00000138267	protein_coding		7	-1	92637130	2827
ENSMUSG00000043541	protein_coding	Casc1	ENSMUST00000128070	retained_intron		6	-1	145210879	448
ENSMUSG00000043079	protein_coding	Synpo	ENSMUST00000139236	processed_transcript		18	-1	60648272	214
ENSMUSG00000064090	protein_coding	Vrk2	ENSMUST00000133487	processed_transcript		11	-1	26549365	437
ENSMUSG00000026420	protein_coding	Il24	ENSMUST00000187650	protein_coding	alternative2	1	-1	130885996	1182
ENSMUSG00000026650	protein_coding	Meig1	ENSMUST00000064685	protein_coding	principal1	2	-1	3422648	706
ENSMUSG00000041343	protein_coding	Ankrd42	ENSMUST00000207971	retained_intron		7	-1	92636260	1257
ENSMUSG00000043541	protein_coding	Casc1	ENSMUST00000205162	retained_intron		6	-1	145210909	4268
ENSMUSG00000043541	protein_coding	Casc1	ENSMUST00000203558	retained_intron		6	-1	145211005	3023
ENSMUSG00000041343	protein_coding	Ankrd42	ENSMUST00000207131	protein_coding		7	-1	92636260	1220
ENSMUSG00000041343	protein_coding	Ankrd42	ENSMUST00000207151	nonsense_mediated_decay		7	-1	92636260	1084
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000225085	retained_intron		18	1	65431008	4316
ENSMUSG00000064090	protein_coding	Vrk2	ENSMUST00000078362	protein_coding	principal1	11	-1	26593920	1889
ENSMUSG00000026650	protein_coding	Meig1	ENSMUST00000115084	protein_coding	principal1	2	-1	3419019	643
ENSMUSG00000030613	protein_coding	Ccdc90b	ENSMUST00000153776	processed_transcript		7	1	92561149	692
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000237739	retained_intron		18	1	65431011	3785
ENSMUSG00000042686	protein_coding	Jph1	ENSMUST00000038382	protein_coding	principal1	1	-1	17097889	4809
ENSMUSG00000026650	protein_coding	Meig1	ENSMUST00000115081	protein_coding	principal1	2	-1	3418581	421
ENSMUSG00000026420	protein_coding	Il24	ENSMUST00000121040	protein_coding	principal2	1	-1	130887454	1159
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000236284	processed_transcript		18	1	65431374	702
ENSMUSG00000026650	protein_coding	Meig1	ENSMUST00000115083	protein_coding	principal1	2	-1	3419041	567
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000235209	retained_intron		18	1	65444264	2036
ENSMUSG00000090827	protein_coding	Gm8297	ENSMUST00000171636	protein_coding	alternative2	14	1	4983935	997
ENSMUSG00000104798	processed_pseudogene	Gm20121	ENSMUST00000198547	processed_pseudogene		5	-1	86961714	1594
ENSMUSG00000090827	protein_coding	Gm8297	ENSMUST00000171964	protein_coding	principal5	14	1	4983994	1759
ENSMUSG00000090827	protein_coding	Gm8297	ENSMUST00000178389	protein_coding	alternative2	14	1	4983998	618
ENSMUSG00000026650	protein_coding	Meig1	ENSMUST00000144584	protein_coding		2	-1	3422594	574
ENSMUSG00000118539	processed_pseudogene	AC160532.1	ENSMUST00000238959	processed_pseudogene		5	1	86962376	189
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000124340	protein_coding	principal2	7	1	143829626	2556
ENSMUSG00000026420	protein_coding	Il24	ENSMUST00000191279	nonsense_mediated_decay		1	-1	130887339	634
ENSMUSG00000041763	protein_coding	Tpp2	ENSMUST00000087933	protein_coding	principal3	1	1	43934007	4649
ENSMUSG00000106185	unprocessed_pseudogene	Gm7631	ENSMUST00000196935	unprocessed_pseudogene		5	1	86976820	1100
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000237488	nonsense_mediated_decay		18	1	65447553	1649
ENSMUSG00000104802	processed_pseudogene	Gm5869	ENSMUST00000200248	processed_pseudogene		5	1	86997159	1257
ENSMUSG00000026420	protein_coding	Il24	ENSMUST00000188148	nonsense_mediated_decay		1	-1	130887413	391
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000141916	protein_coding	principal2	7	1	143830077	2752
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000224229	retained_intron		18	1	65448885	6404
ENSMUSG00000079383	protein_coding	Gm3298	ENSMUST00000165289	protein_coding	principal1	14	1	5015891	516
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000225659	retained_intron		18	1	65451531	556
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000144034	protein_coding		7	1	143830234	713
ENSMUSG00000079383	protein_coding	Gm3298	ENSMUST00000172110	protein_coding		14	1	5015891	615
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000236314	nonsense_mediated_decay		18	1	65453675	829
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000143338	protein_coding		7	1	143830238	850
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000236050	retained_intron		18	1	65458460	1540
ENSMUSG00000041763	protein_coding	Tpp2	ENSMUST00000190401	retained_intron		1	1	43934014	4994
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000207143	protein_coding	alternative2	7	1	143830247	1652
ENSMUSG00000039220	protein_coding	Ppp1r10	ENSMUST00000087211	protein_coding	principal1	17	1	35916566	4255
ENSMUSG00000081945	protein_coding	Olfr607	ENSMUST00000214347	protein_coding	principal5	7	-1	103464151	5706
ENSMUSG00000081945	protein_coding	Olfr607	ENSMUST00000119283	protein_coding	alternative2	7	-1	103461191	915
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000127638	protein_coding	principal4	11	-1	100939540	4516
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000125564	protein_coding		7	1	143830258	361
ENSMUSG00000039220	protein_coding	Ppp1r10	ENSMUST00000130124	processed_transcript		17	1	35916579	336
ENSMUSG00000027160	protein_coding	Ccdc34	ENSMUST00000028580	protein_coding	principal1	2	1	110017817	2070
ENSMUSG00000041763	protein_coding	Tpp2	ENSMUST00000186028	retained_intron		1	1	43934015	1389
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000208631	processed_transcript		7	1	143836651	230
ENSMUSG00000032688	protein_coding	Malt1	ENSMUST00000235999	retained_intron		18	1	65470358	807
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000128610	retained_intron		7	1	143840929	629
ENSMUSG00000041763	protein_coding	Tpp2	ENSMUST00000188313	protein_coding	alternative1	1	1	43934015	4631
ENSMUSG00000028234	protein_coding	Rps20	ENSMUST00000138502	protein_coding	principal1	4	-1	3835665	3706
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000137093	retained_intron		11	-1	100890312	1079
ENSMUSG00000094930	IG_V_gene	Igkv6-25	ENSMUST00000103383	IG_V_gene	principal1	6	1	70215400	380
ENSMUSG00000027160	protein_coding	Ccdc34	ENSMUST00000150183	protein_coding		2	1	110017962	1296
ENSMUSG00000039220	protein_coding	Ppp1r10	ENSMUST00000133641	retained_intron		17	1	35916782	1385
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000145471	nonsense_mediated_decay		7	1	143841334	721
ENSMUSG00000028234	protein_coding	Rps20	ENSMUST00000103009	retained_intron		4	-1	3835488	582
ENSMUSG00000039220	protein_coding	Ppp1r10	ENSMUST00000151664	protein_coding		17	1	35916998	807
ENSMUSG00000112976	processed_pseudogene	Gm2654	ENSMUST00000221381	processed_pseudogene		13	1	50786144	1592
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000197700	protein_coding		5	-1	8116605	527
ENSMUSG00000028234	protein_coding	Rps20	ENSMUST00000130128	retained_intron		4	-1	3835233	512
ENSMUSG00000028707	protein_coding	Dmbx1	ENSMUST00000064806	protein_coding	principal1	4	-1	115925638	5799
ENSMUSG00000058454	protein_coding	Dhcr7	ENSMUST00000073878	protein_coding	principal2	7	1	143823167	2815
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000144241	nonsense_mediated_decay		5	-1	8116605	631
ENSMUSG00000039220	protein_coding	Ppp1r10	ENSMUST00000151375	retained_intron		17	1	35926494	719
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000134767	nonsense_mediated_decay		17	1	5941378	5533
ENSMUSG00000041763	protein_coding	Tpp2	ENSMUST00000188302	nonsense_mediated_decay		1	1	43934033	3075
ENSMUSG00000027160	protein_coding	Ccdc34	ENSMUST00000127630	nonsense_mediated_decay		2	1	110017980	2240
ENSMUSG00000076583	IG_V_gene	Igkv8-24	ENSMUST00000103384	IG_V_gene	principal1	6	-1	70217421	365
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000090174	protein_coding	principal1	2	1	119208634	2008
ENSMUSG00000097315	antisense	Gm26568	ENSMUST00000180496	antisense		1	1	136216074	1594
ENSMUSG00000041763	protein_coding	Tpp2	ENSMUST00000189388	nonsense_mediated_decay		1	1	43934045	2904
ENSMUSG00000041763	protein_coding	Tpp2	ENSMUST00000186441	protein_coding		1	1	43971370	691
ENSMUSG00000039220	protein_coding	Ppp1r10	ENSMUST00000087210	protein_coding	principal1	17	1	35917196	4222
ENSMUSG00000027160	protein_coding	Ccdc34	ENSMUST00000126990	retained_intron		2	1	110021973	840
ENSMUSG00000027160	protein_coding	Ccdc34	ENSMUST00000078939	processed_transcript		2	1	110028773	619
ENSMUSG00000041763	protein_coding	Tpp2	ENSMUST00000190207	protein_coding		1	1	43983285	2420
ENSMUSG00000027160	protein_coding	Ccdc34	ENSMUST00000152930	retained_intron		2	1	110038027	3511
ENSMUSG00000041763	protein_coding	Tpp2	ENSMUST00000187115	retained_intron		1	1	44000825	847
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000142644	processed_transcript		2	1	119209012	392
ENSMUSG00000027160	protein_coding	Ccdc34	ENSMUST00000155110	retained_intron		2	1	110040895	986
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000080283	protein_coding	alternative2	17	1	5941403	4793
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000092671	protein_coding	alternative1	11	-1	100939380	2927
ENSMUSG00000086186	antisense	Ccdc34os	ENSMUST00000153332	antisense		2	-1	110050476	650
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000102519	protein_coding		2	1	119209027	1505
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000138438	protein_coding		11	-1	100939479	2506
ENSMUSG00000027868	protein_coding	Tbx15	ENSMUST00000151606	protein_coding		3	1	99240381	333
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000142409	protein_coding		17	1	5975586	2513
ENSMUSG00000028707	protein_coding	Dmbx1	ENSMUST00000124071	protein_coding	principal1	4	-1	115939926	4017
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000152601	retained_intron		11	-1	100893743	826
ENSMUSG00000021065	protein_coding	Fut8	ENSMUST00000177595	protein_coding	principal1	12	1	77238125	2980
ENSMUSG00000086186	antisense	Ccdc34os	ENSMUST00000123633	antisense		2	-1	110050479	979
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000155972	retained_intron		11	-1	100893802	396
ENSMUSG00000026416	protein_coding	Il20	ENSMUST00000027673	protein_coding	principal1	1	-1	130911451	1186
ENSMUSG00000112655	TEC	Gm48511	ENSMUST00000220255	TEC		12	1	3368429	1531
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000141514	processed_transcript		2	1	119209032	830
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000137367	retained_intron		11	-1	100894433	646
ENSMUSG00000026416	protein_coding	Il20	ENSMUST00000188581	protein_coding		1	-1	130911226	465
ENSMUSG00000021065	protein_coding	Fut8	ENSMUST00000171770	protein_coding	principal1	12	1	77238148	2765
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000123776	retained_intron		2	1	119209041	629
ENSMUSG00000112308	antisense	Gm48512	ENSMUST00000217965	antisense		12	-1	3404066	588
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000154057	retained_intron		2	1	119210839	772
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000153349	processed_transcript		2	1	119211463	172
ENSMUSG00000021065	protein_coding	Fut8	ENSMUST00000219289	retained_intron		12	1	77238813	3554
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000154185	retained_intron		2	1	119211642	451
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000156645	processed_transcript		11	-1	100899307	651
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000123323	retained_intron		2	1	119214456	848
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000061091	protein_coding	principal3	17	1	5975641	4072
ENSMUSG00000068580	protein_coding	Zfyve19	ENSMUST00000147584	retained_intron		2	1	119216265	698
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000151544	retained_intron		11	-1	100895122	408
ENSMUSG00000021065	protein_coding	Fut8	ENSMUST00000217879	retained_intron		12	1	77239043	2209
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000146971	retained_intron		11	-1	100898528	1995
ENSMUSG00000081572	processed_pseudogene	Gm14138	ENSMUST00000122061	processed_pseudogene		2	1	119187517	745
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000115790	protein_coding	alternative2	17	1	5975740	4808
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000154170	retained_intron		11	-1	100905411	672
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000115789	processed_transcript		17	1	5987986	5130
ENSMUSG00000037622	protein_coding	Wdtc1	ENSMUST00000043305	protein_coding	principal1	4	-1	133339324	4191
ENSMUSG00000028707	protein_coding	Dmbx1	ENSMUST00000084338	protein_coding		4	-1	115939926	4031
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000152623	retained_intron		11	-1	100905846	609
ENSMUSG00000021065	protein_coding	Fut8	ENSMUST00000062804	protein_coding	principal1	12	1	77239065	3358
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000115788	retained_intron		17	1	5990063	3498
ENSMUSG00000004040	protein_coding	Stat3	ENSMUST00000130686	retained_intron		11	-1	100908224	349
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000115787	processed_transcript		17	1	5996016	4013
ENSMUSG00000037622	protein_coding	Wdtc1	ENSMUST00000105906	protein_coding		4	-1	133339271	4057
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000115786	protein_coding		17	1	5996846	2531
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000115784	retained_intron		17	1	6007580	2634
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000115785	protein_coding		17	1	6007597	3778
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000114610	protein_coding	alternative2	2	1	19909780	2863
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000130661	processed_transcript		17	1	6007612	460
ENSMUSG00000021065	protein_coding	Fut8	ENSMUST00000219299	processed_transcript		12	1	77388864	2079
ENSMUSG00000021065	protein_coding	Fut8	ENSMUST00000218851	processed_transcript		12	1	77410141	2099
ENSMUSG00000020376	protein_coding	Rnf130	ENSMUST00000054684	protein_coding	alternative2	11	1	50025346	1415
ENSMUSG00000037622	protein_coding	Wdtc1	ENSMUST00000135929	processed_transcript		4	-1	133352878	628
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000232567	processed_transcript		17	1	6008034	808
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000154935	protein_coding		5	-1	8116605	801
ENSMUSG00000112150	bidirectional_promoter_lncRNA	9530018F02Rik	ENSMUST00000219513	bidirectional_promoter_lncRNA		12	-1	77238663	2599
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000139048	protein_coding		5	-1	8116605	684
ENSMUSG00000037622	protein_coding	Wdtc1	ENSMUST00000145426	processed_transcript		4	-1	133322230	348
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000154114	protein_coding		17	1	6013549	2792
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000139841	protein_coding		5	-1	8116605	558
ENSMUSG00000117831	processed_pseudogene	Gm6995	ENSMUST00000235371	processed_pseudogene		18	-1	72427108	583
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000153427	protein_coding		5	-1	8116605	753
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000136524	protein_coding		5	-1	8116605	582
ENSMUSG00000023805	protein_coding	Synj2	ENSMUST00000126881	protein_coding		17	1	6025076	1260
ENSMUSG00000037622	protein_coding	Wdtc1	ENSMUST00000140976	processed_transcript		4	-1	133353481	718
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000153889	protein_coding		5	-1	8116605	573
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000123168	protein_coding		5	-1	8116605	495
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000130315	protein_coding		5	-1	8116605	576
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000136808	protein_coding		5	-1	8116605	747
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000126384	protein_coding		5	-1	8116605	660
ENSMUSG00000109553	processed_pseudogene	Gm17992	ENSMUST00000207346	processed_pseudogene		7	1	108865424	1072
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000196356	retained_intron		5	-1	8090240	2303
ENSMUSG00000117984	lincRNA	Gm31819	ENSMUST00000235469	lincRNA		18	-1	72725067	2851
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000111899	protein_coding	principal1	19	1	46056539	5246
ENSMUSG00000027868	protein_coding	Tbx15	ENSMUST00000029462	protein_coding	principal1	3	1	99253760	3566
ENSMUSG00000020376	protein_coding	Rnf130	ENSMUST00000238748	protein_coding	alternative2	11	1	50025347	7879
ENSMUSG00000066240	protein_coding	Olfr517	ENSMUST00000216500	protein_coding	principal1	7	-1	108872379	2139
ENSMUSG00000118316	lincRNA	Gm31908	ENSMUST00000236243	lincRNA		18	-1	72921090	2301
ENSMUSG00000066240	protein_coding	Olfr517	ENSMUST00000084753	protein_coding	principal1	7	-1	108869175	1055
ENSMUSG00000027868	protein_coding	Tbx15	ENSMUST00000150756	protein_coding		3	1	99296510	653
ENSMUSG00000008129	protein_coding	4930432K21Rik	ENSMUST00000143833	protein_coding		8	1	84148025	378
ENSMUSG00000035351	protein_coding	Nup37	ENSMUST00000052355	protein_coding	principal1	10	1	88146992	1267
ENSMUSG00000105689	antisense	Gm43120	ENSMUST00000196228	antisense		3	-1	99261285	667
ENSMUSG00000112798	lincRNA	Gm40685	ENSMUST00000217861	lincRNA		10	1	69312139	580
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000099392	protein_coding		19	1	46056581	3956
ENSMUSG00000035351	protein_coding	Nup37	ENSMUST00000219859	retained_intron		10	1	88147027	1448
ENSMUSG00000087390	lincRNA	Gm7598	ENSMUST00000130251	lincRNA		X	1	38476461	3123
ENSMUSG00000046431	protein_coding	Olfr518	ENSMUST00000217803	protein_coding	principal1	7	-1	108885006	2994
ENSMUSG00000084108	processed_pseudogene	Gm15794	ENSMUST00000120182	processed_pseudogene		5	-1	66201326	631
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000062322	protein_coding		19	1	46056584	5205
ENSMUSG00000035351	protein_coding	Nup37	ENSMUST00000169309	protein_coding	principal1	10	1	88147077	1277
ENSMUSG00000049832	processed_pseudogene	Rbx1-ps	ENSMUST00000173786	processed_pseudogene		17	-1	35935950	327
ENSMUSG00000020376	protein_coding	Rnf130	ENSMUST00000102776	protein_coding	principal3	11	1	50025348	1502
ENSMUSG00000046431	protein_coding	Olfr518	ENSMUST00000059617	protein_coding	principal1	7	-1	108881604	1002
ENSMUSG00000081183	processed_pseudogene	Gm12449	ENSMUST00000117572	processed_pseudogene		3	-1	99463825	234
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000128386	processed_transcript		19	1	46056832	385
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000087622	protein_coding	principal1	6	1	140424054	7382
ENSMUSG00000020787	protein_coding	P2rx1	ENSMUST00000021141	protein_coding	principal1	11	1	72999103	2486
ENSMUSG00000035351	protein_coding	Nup37	ENSMUST00000218935	retained_intron		10	1	88147105	679
ENSMUSG00000116572	lincRNA	Gm49695	ENSMUST00000232608	lincRNA		16	1	31469926	2301
ENSMUSG00000052748	protein_coding	Swt1	ENSMUST00000064771	protein_coding	principal1	1	-1	151428455	3688
ENSMUSG00000080832	processed_pseudogene	M6pr-ps	ENSMUST00000120481	processed_pseudogene		3	1	99500550	830
ENSMUSG00000020376	protein_coding	Rnf130	ENSMUST00000143607	processed_transcript		11	1	50093674	561
ENSMUSG00000035351	protein_coding	Nup37	ENSMUST00000219121	protein_coding		10	1	88174439	430
ENSMUSG00000116762	lincRNA	Gm46560	ENSMUST00000231805	lincRNA		16	1	31508387	995
ENSMUSG00000083938	processed_pseudogene	Gm12448	ENSMUST00000118852	processed_pseudogene		3	-1	99545062	655
ENSMUSG00000020787	protein_coding	P2rx1	ENSMUST00000092938	protein_coding		11	1	72999315	1119
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000046838	protein_coding	principal3	5	-1	8368077	2773
ENSMUSG00000052748	protein_coding	Swt1	ENSMUST00000111883	nonsense_mediated_decay		1	-1	151428436	2855
ENSMUSG00000034278	protein_coding	Dnajc17	ENSMUST00000038439	protein_coding	principal1	2	-1	119208795	1008
ENSMUSG00000052748	protein_coding	Swt1	ENSMUST00000124880	retained_intron		1	-1	151372364	317
ENSMUSG00000035351	protein_coding	Nup37	ENSMUST00000219059	retained_intron		10	1	88174863	721
ENSMUSG00000052748	protein_coding	Swt1	ENSMUST00000139244	retained_intron		1	-1	151384516	323
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000199853	protein_coding		5	-1	8116605	417
ENSMUSG00000052748	protein_coding	Swt1	ENSMUST00000141977	protein_coding		1	-1	151403027	522
ENSMUSG00000066239	protein_coding	Olfr519	ENSMUST00000202706	protein_coding	principal1	7	-1	108894405	945
ENSMUSG00000041605	protein_coding	Inava	ENSMUST00000120339	protein_coding	principal1	1	-1	136234264	2988
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000135327	protein_coding		19	1	46056832	386
ENSMUSG00000092284	unprocessed_pseudogene	Gm8801	ENSMUST00000173255	unprocessed_pseudogene		17	1	35947246	1064
ENSMUSG00000034278	protein_coding	Dnajc17	ENSMUST00000141009	processed_transcript		2	-1	119183827	616
ENSMUSG00000052748	protein_coding	Swt1	ENSMUST00000129939	protein_coding		1	-1	151423555	752
ENSMUSG00000073948	protein_coding	Olfr608	ENSMUST00000213546	protein_coding	principal1	7	1	103469877	1482
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000150158	protein_coding		19	1	46056864	543
ENSMUSG00000066239	protein_coding	Olfr519	ENSMUST00000084752	protein_coding		7	-1	108894420	960
ENSMUSG00000052748	protein_coding	Swt1	ENSMUST00000189595	retained_intron		1	-1	151404607	2850
ENSMUSG00000116793	lincRNA	Gm34256	ENSMUST00000232216	lincRNA		16	-1	31593220	1615
ENSMUSG00000041605	protein_coding	Inava	ENSMUST00000150163	protein_coding		1	-1	136230289	743
ENSMUSG00000052748	protein_coding	Swt1	ENSMUST00000138095	retained_intron		1	-1	151412979	490
ENSMUSG00000034278	protein_coding	Dnajc17	ENSMUST00000125731	retained_intron		2	-1	119208782	450
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000126127	protein_coding		19	1	46057236	564
ENSMUSG00000052748	protein_coding	Swt1	ENSMUST00000131312	retained_intron		1	-1	151423344	5176
ENSMUSG00000030109	protein_coding	Slc6a12	ENSMUST00000166457	protein_coding	alternative2	6	1	121343076	1891
ENSMUSG00000020787	protein_coding	P2rx1	ENSMUST00000148964	retained_intron		11	1	73009791	1805
ENSMUSG00000052748	protein_coding	Swt1	ENSMUST00000185247	retained_intron		1	-1	151428455	1432
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000147640	protein_coding		19	1	46057259	308
ENSMUSG00000116597	lincRNA	Gm536	ENSMUST00000232340	lincRNA		16	1	31617735	4830
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000133101	processed_transcript		19	1	46067834	305
ENSMUSG00000030109	protein_coding	Slc6a12	ENSMUST00000168295	protein_coding		6	1	121343399	428
ENSMUSG00000116597	lincRNA	Gm536	ENSMUST00000232209	lincRNA		16	1	31618133	827
ENSMUSG00000055926	protein_coding	Gm14137	ENSMUST00000239130	protein_coding	alternative2	2	1	119174509	3067
ENSMUSG00000055926	protein_coding	Gm14137	ENSMUST00000069711	protein_coding	principal2	2	1	119174509	3067
ENSMUSG00000055491	protein_coding	Pprc1	ENSMUST00000146882	retained_intron		19	1	46071754	689
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000113615	protein_coding	principal1	19	-1	5688908	7264
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000115385	protein_coding		5	-1	8368081	2318
ENSMUSG00000096197	protein_coding	4930555G01Rik	ENSMUST00000112770	protein_coding	principal1	14	1	5050629	2065
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000204145	nonsense_mediated_decay		6	1	140424160	2902
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000203517	protein_coding		6	1	140424161	3006
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000138652	processed_transcript		5	-1	8368134	1620
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000143929	retained_intron		5	-1	8368160	705
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000115388	protein_coding	alternative2	5	-1	8368081	9161
ENSMUSG00000041605	protein_coding	Inava	ENSMUST00000144464	protein_coding		1	-1	136230310	811
ENSMUSG00000030109	protein_coding	Slc6a12	ENSMUST00000032200	protein_coding	principal2	6	1	121346618	2644
ENSMUSG00000040537	protein_coding	Adam22	ENSMUST00000088744	protein_coding	alternative2	5	-1	8368081	9245
ENSMUSG00000021127	protein_coding	Zfp36l1	ENSMUST00000021552	protein_coding	principal1	12	-1	80113013	2990
ENSMUSG00000106265	TEC	Gm42490	ENSMUST00000198595	TEC		5	-1	8329395	2064
ENSMUSG00000094226	processed_pseudogene	Gm21759	ENSMUST00000178345	processed_pseudogene		5	1	8179636	1828
ENSMUSG00000041605	protein_coding	Inava	ENSMUST00000194374	retained_intron		1	-1	136227662	2387
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000203774	protein_coding		6	1	140432989	1912
ENSMUSG00000037486	protein_coding	Asxl2	ENSMUST00000092003	protein_coding		12	1	3426857	11934
ENSMUSG00000021127	protein_coding	Zfp36l1	ENSMUST00000219642	protein_coding		12	-1	80112994	545
ENSMUSG00000095681	protein_coding	Gm8281	ENSMUST00000163719	protein_coding	principal1	14	1	5071040	1954
ENSMUSG00000058665	protein_coding	En1	ENSMUST00000079721	protein_coding	principal1	1	1	120602418	2624
ENSMUSG00000030109	protein_coding	Slc6a12	ENSMUST00000166390	nonsense_mediated_decay		6	1	121347419	500
ENSMUSG00000021127	protein_coding	Zfp36l1	ENSMUST00000218835	protein_coding		12	-1	80112999	292
ENSMUSG00000095681	protein_coding	Gm8281	ENSMUST00000100893	protein_coding		14	1	5085714	612
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000204876	protein_coding		6	1	140516424	1928
ENSMUSG00000030109	protein_coding	Slc6a12	ENSMUST00000171008	protein_coding	alternative2	6	1	121347419	1674
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000203955	protein_coding		6	1	140524865	2868
ENSMUSG00000037486	protein_coding	Asxl2	ENSMUST00000144247	protein_coding		12	1	3426884	1483
ENSMUSG00000103829	lincRNA	Gm38174	ENSMUST00000191787	lincRNA		Y	1	20791345	1494
ENSMUSG00000008129	protein_coding	4930432K21Rik	ENSMUST00000118856	protein_coding	principal4	8	1	84148159	2366
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000152755	processed_transcript		11	-1	61494266	3255
ENSMUSG00000041605	protein_coding	Inava	ENSMUST00000153910	nonsense_mediated_decay		1	-1	136234119	482
ENSMUSG00000049709	protein_coding	Nlrp10	ENSMUST00000055745	protein_coding	principal1	7	-1	108930178	4504
ENSMUSG00000021127	protein_coding	Zfp36l1	ENSMUST00000165114	protein_coding	principal1	12	-1	80112998	1934
ENSMUSG00000041605	protein_coding	Inava	ENSMUST00000195177	protein_coding		1	-1	136230019	428
ENSMUSG00000115431	processed_pseudogene	Gm3219	ENSMUST00000226608	processed_pseudogene		14	1	34345281	303
ENSMUSG00000103829	lincRNA	Gm38174	ENSMUST00000193712	lincRNA		Y	1	20791799	612
ENSMUSG00000099957	lincRNA	2610027F03Rik	ENSMUST00000186982	lincRNA		1	1	120621740	1154
ENSMUSG00000103829	lincRNA	Gm38174	ENSMUST00000194409	lincRNA		Y	1	20791799	431
ENSMUSG00000037486	protein_coding	Asxl2	ENSMUST00000153102	protein_coding	principal2	12	1	3426901	4462
ENSMUSG00000008129	protein_coding	4930432K21Rik	ENSMUST00000093375	protein_coding	alternative2	8	1	84148252	2167
ENSMUSG00000019863	protein_coding	Qrsl1	ENSMUST00000020012	protein_coding	principal1	10	-1	43901745	1981
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000205255	processed_transcript		6	1	140535175	3657
ENSMUSG00000101386	lincRNA	Gm29346	ENSMUST00000188147	lincRNA		1	1	120758443	255
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000204080	nonsense_mediated_decay		6	1	140543988	2947
ENSMUSG00000037486	protein_coding	Asxl2	ENSMUST00000140046	retained_intron		12	1	3426912	2895
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000146638	retained_intron		19	-1	5673947	3159
ENSMUSG00000019863	protein_coding	Qrsl1	ENSMUST00000146937	retained_intron		10	-1	43877104	918
ENSMUSG00000114194	processed_pseudogene	Gm3800	ENSMUST00000221086	processed_pseudogene		13	1	65313758	554
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000205025	processed_transcript		6	1	140544014	1768
ENSMUSG00000061315	protein_coding	Naca	ENSMUST00000073868	protein_coding	principal1	10	1	128035575	885
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000068169	protein_coding		19	-1	5688149	5276
ENSMUSG00000101922	lincRNA	Gm29345	ENSMUST00000189213	lincRNA		1	1	120816500	399
ENSMUSG00000102668	protein_coding	Gm29866	ENSMUST00000191675	protein_coding	principal1	Y	-1	20993657	923
ENSMUSG00000100761	processed_pseudogene	Gm29344	ENSMUST00000068143	processed_pseudogene		1	-1	120825456	210
ENSMUSG00000004018	protein_coding	Fancl	ENSMUST00000004120	protein_coding	principal3	11	1	26386135	2724
ENSMUSG00000030613	protein_coding	Ccdc90b	ENSMUST00000032842	protein_coding	principal1	7	1	92561149	1596
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000203012	protein_coding		6	1	140544018	3140
ENSMUSG00000030109	protein_coding	Slc6a12	ENSMUST00000171874	retained_intron		6	1	121356820	790
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000205026	protein_coding		6	1	140544153	2816
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000213444	protein_coding		6	1	140563568	5252
ENSMUSG00000099336	lincRNA	Gm29348	ENSMUST00000189555	lincRNA		1	-1	120857486	779
ENSMUSG00000030613	protein_coding	Ccdc90b	ENSMUST00000085017	protein_coding		7	1	92561149	1494
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000161522	protein_coding		7	1	29134851	3242
ENSMUSG00000100979	lincRNA	Gm29347	ENSMUST00000186695	lincRNA		1	1	120856674	449
ENSMUSG00000104131	lincRNA	Gm36950	ENSMUST00000191738	lincRNA		Y	-1	21055721	1499
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000204755	retained_intron		6	1	140569326	777
ENSMUSG00000037486	protein_coding	Asxl2	ENSMUST00000138740	nonsense_mediated_decay		12	1	3442506	1197
ENSMUSG00000031168	protein_coding	Ebp	ENSMUST00000033509	protein_coding	principal1	X	-1	8193512	1743
ENSMUSG00000030109	protein_coding	Slc6a12	ENSMUST00000170582	retained_intron		6	1	121356833	797
ENSMUSG00000004018	protein_coding	Fancl	ENSMUST00000143471	processed_transcript		11	1	26387202	1065
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000203315	retained_intron		6	1	140577135	453
ENSMUSG00000037486	protein_coding	Asxl2	ENSMUST00000219208	retained_intron		12	1	3474659	2715
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000203483	protein_coding		6	1	140577323	1845
ENSMUSG00000030109	protein_coding	Slc6a12	ENSMUST00000165456	nonsense_mediated_decay		6	1	121356918	1030
ENSMUSG00000061315	protein_coding	Naca	ENSMUST00000092048	protein_coding		10	1	128035635	6745
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000057028	protein_coding	principal3	8	1	3587293	4450
ENSMUSG00000030231	protein_coding	Plekha5	ENSMUST00000204528	retained_intron		6	1	140581756	441
ENSMUSG00000030109	protein_coding	Slc6a12	ENSMUST00000163771	nonsense_mediated_decay		6	1	121356918	883
ENSMUSG00000104131	lincRNA	Gm36950	ENSMUST00000193541	lincRNA		Y	-1	21055268	622
ENSMUSG00000104131	lincRNA	Gm36950	ENSMUST00000194878	lincRNA		Y	-1	21055268	438
ENSMUSG00000004018	protein_coding	Fancl	ENSMUST00000109509	protein_coding	alternative2	11	1	26387202	1187
ENSMUSG00000031168	protein_coding	Ebp	ENSMUST00000140011	retained_intron		X	-1	8187174	1034
ENSMUSG00000037486	protein_coding	Asxl2	ENSMUST00000152196	processed_transcript		12	1	3493761	5561
ENSMUSG00000030109	protein_coding	Slc6a12	ENSMUST00000170339	retained_intron		6	1	121358965	808
ENSMUSG00000037486	protein_coding	Asxl2	ENSMUST00000111215	protein_coding	alternative2	12	1	3426857	8887
ENSMUSG00000004018	protein_coding	Fancl	ENSMUST00000136830	protein_coding		11	1	26387202	383
ENSMUSG00000031168	protein_coding	Ebp	ENSMUST00000143223	protein_coding		X	-1	8193400	526
ENSMUSG00000086109	lincRNA	Gm13391	ENSMUST00000147685	lincRNA		2	1	6472000	816
ENSMUSG00000031168	protein_coding	Ebp	ENSMUST00000149495	retained_intron		X	-1	8192898	660
ENSMUSG00000019863	protein_coding	Qrsl1	ENSMUST00000154405	retained_intron		10	-1	43901745	2290
ENSMUSG00000004018	protein_coding	Fancl	ENSMUST00000134445	protein_coding		11	1	26468335	577
ENSMUSG00000109145	lincRNA	Gm20744	ENSMUST00000208972	lincRNA		7	1	82070387	2626
ENSMUSG00000086109	lincRNA	Gm13391	ENSMUST00000128589	lincRNA		2	1	6472271	511
ENSMUSG00000068314	TEC	Gm6899	ENSMUST00000238582	TEC		11	1	26593226	1683
ENSMUSG00000019863	protein_coding	Qrsl1	ENSMUST00000216786	processed_transcript		10	-1	43901666	759
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000218635	protein_coding	principal1	10	-1	12869365	11801
ENSMUSG00000068314	TEC	Gm6899	ENSMUST00000089614	TEC		11	1	26593241	622
ENSMUSG00000108845	lincRNA	Gm45090	ENSMUST00000208775	lincRNA		7	-1	82157024	1148
ENSMUSG00000108987	lincRNA	Gm45056	ENSMUST00000208140	lincRNA		7	-1	82120432	3462
ENSMUSG00000103023	unprocessed_pseudogene	Gm20910	ENSMUST00000193268	unprocessed_pseudogene		Y	1	21096898	696
ENSMUSG00000019863	protein_coding	Qrsl1	ENSMUST00000217541	retained_intron		10	-1	43895541	664
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000217994	protein_coding		10	-1	12614831	3161
ENSMUSG00000081811	processed_pseudogene	Gm12713	ENSMUST00000118404	processed_pseudogene		11	1	26409207	764
ENSMUSG00000102599	TEC	Gm38386	ENSMUST00000194293	TEC		2	1	6479690	3421
ENSMUSG00000108868	lincRNA	Gm32850	ENSMUST00000208138	lincRNA		7	1	82120053	192
ENSMUSG00000108868	lincRNA	Gm32850	ENSMUST00000209149	lincRNA		7	1	82120072	732
ENSMUSG00000103689	unprocessed_pseudogene	Gm30598	ENSMUST00000192620	unprocessed_pseudogene		Y	1	21133838	615
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000217938	retained_intron		10	-1	12403075	531
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000171962	protein_coding	alternative2	8	1	3587794	3925
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000124905	retained_intron		19	-1	5666198	655
ENSMUSG00000117763	lincRNA	9830166K06Rik	ENSMUST00000236864	lincRNA		19	-1	8663335	2742
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000207712	protein_coding		8	1	3587812	2539
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000133136	nonsense_mediated_decay		19	-1	5666982	725
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000207970	protein_coding	alternative2	8	1	3587812	3817
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000132420	retained_intron		19	-1	5666526	452
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000207533	protein_coding		8	1	3587812	2584
ENSMUSG00000094294	protein_coding	Gm20909	ENSMUST00000181205	protein_coding	principal1	Y	1	21164570	1223
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000208240	protein_coding		8	1	3587812	2572
ENSMUSG00000094294	protein_coding	Gm20909	ENSMUST00000178234	protein_coding	principal1	Y	1	21166083	684
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000207432	protein_coding	alternative2	8	1	3587812	3865
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000207077	protein_coding	alternative2	8	1	3587812	3832
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000219724	retained_intron		10	-1	12688862	2565
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000145270	protein_coding		19	-1	5684669	2136
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000208036	protein_coding		8	1	3588051	591
ENSMUSG00000099851	antisense	Gm29542	ENSMUST00000186876	antisense		12	1	31486958	704
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000137313	protein_coding		19	-1	5679577	840
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000219584	protein_coding		10	-1	12868171	2328
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000219660	protein_coding		10	-1	12868281	2468
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000127876	protein_coding		19	-1	5683343	719
ENSMUSG00000046330	protein_coding	Rpl37a	ENSMUST00000059980	protein_coding	principal1	1	1	72711290	558
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000217899	protein_coding		10	-1	12813615	2272
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000141577	protein_coding		19	-1	5683873	762
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000207930	retained_intron		8	1	3600548	4466
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000147161	retained_intron		19	-1	5681536	568
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000219130	protein_coding		10	-1	12826938	660
ENSMUSG00000046330	protein_coding	Rpl37a	ENSMUST00000212432	retained_intron		1	1	72711314	665
ENSMUSG00000054874	protein_coding	Pcnx3	ENSMUST00000135119	retained_intron		19	-1	5688695	3144
ENSMUSG00000046330	protein_coding	Rpl37a	ENSMUST00000212335	nonsense_mediated_decay		1	1	72711758	400
ENSMUSG00000046330	protein_coding	Rpl37a	ENSMUST00000211963	retained_intron		1	1	72711781	449
ENSMUSG00000031029	protein_coding	Eif3f	ENSMUST00000033342	protein_coding	principal1	7	1	108934417	2514
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000219163	nonsense_mediated_decay		10	-1	12813574	648
ENSMUSG00000080986	unprocessed_pseudogene	Olfr1081-ps1	ENSMUST00000120210	unprocessed_pseudogene		2	-1	86568064	945
ENSMUSG00000118077	antisense	Gm50315	ENSMUST00000237906	antisense		19	-1	5690010	600
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000219145	retained_intron		10	-1	12813549	1139
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000208064	retained_intron		8	1	3602083	3241
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000219135	retained_intron		10	-1	12868179	430
ENSMUSG00000031029	protein_coding	Eif3f	ENSMUST00000153596	retained_intron		7	1	108938395	439
ENSMUSG00000044433	protein_coding	Camsap3	ENSMUST00000207152	nonsense_mediated_decay		8	1	3606338	846
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000101085	protein_coding		11	-1	61494266	3254
ENSMUSG00000031029	protein_coding	Eif3f	ENSMUST00000147369	retained_intron		7	1	108940308	588
ENSMUSG00000019820	protein_coding	Utrn	ENSMUST00000076817	protein_coding	principal1	10	-1	12861735	12382
ENSMUSG00000111689	protein_coding	Olfr1082	ENSMUST00000215600	protein_coding	principal1	2	-1	86598966	1620
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000128478	processed_transcript		11	-1	61494266	4238
ENSMUSG00000112698	processed_pseudogene	Gm7525	ENSMUST00000219425	processed_pseudogene		10	1	12846088	454
ENSMUSG00000062713	protein_coding	Sim2	ENSMUST00000231688	nonsense_mediated_decay		16	1	94084931	3920
ENSMUSG00000112816	TEC	Gm48798	ENSMUST00000220361	TEC		10	-1	12421596	793
ENSMUSG00000100778	lincRNA	Gm28908	ENSMUST00000189002	lincRNA		Y	1	53729612	356
ENSMUSG00000117593	processed_pseudogene	Gm18764	ENSMUST00000235066	processed_pseudogene		18	1	10859680	754
ENSMUSG00000004054	protein_coding	Map3k11	ENSMUST00000235727	processed_transcript		19	1	5688742	441
ENSMUSG00000016524	protein_coding	Il19	ENSMUST00000187410	protein_coding	principal1	1	-1	130940101	1135
ENSMUSG00000100835	unprocessed_pseudogene	Gm28907	ENSMUST00000189700	unprocessed_pseudogene		Y	-1	53745263	615
ENSMUSG00000101446	unprocessed_pseudogene	Gm21749	ENSMUST00000189343	unprocessed_pseudogene		Y	-1	53782205	696
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000146881	protein_coding		2	1	20289913	756
ENSMUSG00000117563	processed_pseudogene	Gm7575	ENSMUST00000235119	processed_pseudogene		18	1	10928884	2627
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000131714	protein_coding		2	1	20339824	591
ENSMUSG00000062713	protein_coding	Sim2	ENSMUST00000072182	protein_coding	principal1	16	1	94084931	3999
ENSMUSG00000112452	lincRNA	Gm48075	ENSMUST00000218567	lincRNA		12	1	8394209	403
ENSMUSG00000016524	protein_coding	Il19	ENSMUST00000187916	protein_coding		1	-1	130940115	720
ENSMUSG00000112664	TEC	Gm48076	ENSMUST00000219269	TEC		12	-1	8454918	1415
ENSMUSG00000062713	protein_coding	Sim2	ENSMUST00000231295	processed_transcript		16	1	94125181	440
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000125840	processed_transcript		11	-1	61494296	3134
ENSMUSG00000112657	transcribed_processed_pseudogene	BC106175	ENSMUST00000218578	processed_transcript		12	-1	8482157	695
ENSMUSG00000112657	transcribed_processed_pseudogene	BC106175	ENSMUST00000219560	processed_transcript		12	-1	8480587	1708
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000156636	protein_coding		1	1	66175273	546
ENSMUSG00000112657	transcribed_processed_pseudogene	BC106175	ENSMUST00000219344	transcribed_processed_pseudogene		12	-1	8480303	1213
ENSMUSG00000016524	protein_coding	Il19	ENSMUST00000112465	protein_coding	principal1	1	-1	130940073	880
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000204845	protein_coding		7	1	29134851	3182
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000205027	protein_coding		7	1	29134851	2717
ENSMUSG00000081340	processed_pseudogene	Gm12275	ENSMUST00000119805	processed_pseudogene		11	-1	62305170	307
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000204194	protein_coding		7	1	29134851	2993
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000203070	protein_coding		7	1	29134851	3008
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000203380	protein_coding		7	1	29134851	3077
ENSMUSG00000086310	antisense	Gm12278	ENSMUST00000153718	antisense		11	1	62482797	407
ENSMUSG00000014496	protein_coding	Ankrd28	ENSMUST00000227863	protein_coding	alternative1	14	-1	31780393	6616
ENSMUSG00000029169	protein_coding	Dhx15	ENSMUST00000031061	protein_coding	principal1	5	-1	52190514	3010
ENSMUSG00000020668	protein_coding	Kif3c	ENSMUST00000220210	protein_coding	principal1	12	1	3365132	4144
ENSMUSG00000040046	protein_coding	Tph1	ENSMUST00000049298	protein_coding	principal1	7	-1	46672537	4562
ENSMUSG00000081944	processed_pseudogene	Gm12276	ENSMUST00000121709	processed_pseudogene		11	1	62331421	301
ENSMUSG00000014873	protein_coding	Surf2	ENSMUST00000015017	protein_coding	principal1	2	1	26916367	1203
ENSMUSG00000016524	protein_coding	Il19	ENSMUST00000016668	protein_coding	principal1	1	-1	130939241	1021
ENSMUSG00000014496	protein_coding	Ankrd28	ENSMUST00000014640	protein_coding	principal2	14	-1	31830651	6712
ENSMUSG00000029169	protein_coding	Dhx15	ENSMUST00000200186	nonsense_mediated_decay		5	-1	52190377	2375
ENSMUSG00000043681	protein_coding	Fam25c	ENSMUST00000052126	protein_coding	principal1	14	-1	34355433	408
ENSMUSG00000029169	protein_coding	Dhx15	ENSMUST00000199343	retained_intron		5	-1	52157803	1253
ENSMUSG00000019470	protein_coding	Xab2	ENSMUST00000163038	retained_intron		8	-1	3621305	4409
ENSMUSG00000029169	protein_coding	Dhx15	ENSMUST00000199321	protein_coding		5	-1	52190489	2550
ENSMUSG00000014496	protein_coding	Ankrd28	ENSMUST00000227089	protein_coding		14	-1	31781915	3522
ENSMUSG00000020668	protein_coding	Kif3c	ENSMUST00000020999	protein_coding	principal1	12	1	3365190	6791
ENSMUSG00000030638	protein_coding	Sh3gl3	ENSMUST00000179318	protein_coding		7	1	82173840	1489
ENSMUSG00000029169	protein_coding	Dhx15	ENSMUST00000198378	retained_intron		5	-1	52161633	2384
ENSMUSG00000040046	protein_coding	Tph1	ENSMUST00000107669	protein_coding	principal1	7	-1	46667377	1762
ENSMUSG00000014496	protein_coding	Ankrd28	ENSMUST00000227613	retained_intron		14	-1	31707703	895
ENSMUSG00000029169	protein_coding	Dhx15	ENSMUST00000195922	protein_coding		5	-1	52190494	702
ENSMUSG00000029169	protein_coding	Dhx15	ENSMUST00000196230	retained_intron		5	-1	52187414	2600
ENSMUSG00000106607	TEC	Gm43178	ENSMUST00000197257	TEC		5	-1	52175755	1386
ENSMUSG00000020668	protein_coding	Kif3c	ENSMUST00000219895	protein_coding		12	1	3387381	2962
ENSMUSG00000108032	unprocessed_pseudogene	Olfr210-ps1	ENSMUST00000203138	unprocessed_pseudogene		6	-1	73421218	905
ENSMUSG00000020668	protein_coding	Kif3c	ENSMUST00000218952	processed_transcript		12	1	3400085	746
ENSMUSG00000040046	protein_coding	Tph1	ENSMUST00000172386	nonsense_mediated_decay		7	-1	46665288	1134
ENSMUSG00000107408	lincRNA	1700065L07Rik	ENSMUST00000204961	lincRNA		6	-1	73471021	614
ENSMUSG00000040046	protein_coding	Tph1	ENSMUST00000170251	nonsense_mediated_decay		7	-1	46665301	1217
ENSMUSG00000020668	protein_coding	Kif3c	ENSMUST00000217891	retained_intron		12	1	3402064	645
ENSMUSG00000056197	protein_coding	4931417E11Rik	ENSMUST00000205241	processed_transcript		6	-1	73469619	1039
ENSMUSG00000056197	protein_coding	4931417E11Rik	ENSMUST00000204006	transcribed_processed_pseudogene		6	-1	73469564	918
ENSMUSG00000040046	protein_coding	Tph1	ENSMUST00000110264	retained_intron		7	-1	46651419	869
ENSMUSG00000056197	protein_coding	4931417E11Rik	ENSMUST00000070163	protein_coding	principal1	6	-1	73469667	1095
ENSMUSG00000002781	protein_coding	Tmem143	ENSMUST00000069772	protein_coding	principal1	7	1	45896941	2297
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000162946	retained_intron		7	1	29134933	2005
ENSMUSG00000040046	protein_coding	Tph1	ENSMUST00000170045	retained_intron		7	-1	46660668	516
ENSMUSG00000107639	processed_pseudogene	Gm4374	ENSMUST00000204929	processed_pseudogene		6	-1	73529238	424
ENSMUSG00000071456	antisense	1110002L01Rik	ENSMUST00000168012	antisense		12	-1	3427011	3569
ENSMUSG00000014873	protein_coding	Surf2	ENSMUST00000126947	processed_transcript		2	1	26916381	2519
ENSMUSG00000040046	protein_coding	Tph1	ENSMUST00000163468	retained_intron		7	-1	46662315	989
ENSMUSG00000036995	protein_coding	Asap3	ENSMUST00000047526	protein_coding	principal1	4	1	136206365	4225
ENSMUSG00000002781	protein_coding	Tmem143	ENSMUST00000210503	protein_coding		7	1	45897078	778
ENSMUSG00000040046	protein_coding	Tph1	ENSMUST00000168335	protein_coding		7	-1	46667343	578
ENSMUSG00000014245	protein_coding	Pigl	ENSMUST00000014389	protein_coding	principal1	11	1	62458460	2174
ENSMUSG00000002781	protein_coding	Tmem143	ENSMUST00000209292	nonsense_mediated_decay		7	1	45897081	2026
ENSMUSG00000002781	protein_coding	Tmem143	ENSMUST00000209395	retained_intron		7	1	45897084	4729
ENSMUSG00000014496	protein_coding	Ankrd28	ENSMUST00000227307	processed_transcript		14	-1	31742829	666
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000209490	protein_coding		8	1	78509352	3485
ENSMUSG00000046396	protein_coding	Olfr609	ENSMUST00000216360	protein_coding	principal1	7	-1	103498039	3295
ENSMUSG00000014873	protein_coding	Surf2	ENSMUST00000125408	processed_transcript		2	1	26916669	740
ENSMUSG00000014496	protein_coding	Ankrd28	ENSMUST00000227083	processed_transcript		14	-1	31742834	650
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000079080	protein_coding	principal1	11	-1	61494296	3019
ENSMUSG00000002781	protein_coding	Tmem143	ENSMUST00000209580	retained_intron		7	1	45897084	978
ENSMUSG00000014245	protein_coding	Pigl	ENSMUST00000147918	processed_transcript		11	1	62458608	573
ENSMUSG00000046396	protein_coding	Olfr609	ENSMUST00000216075	protein_coding	principal1	7	-1	103498062	3429
ENSMUSG00000071456	antisense	1110002L01Rik	ENSMUST00000095903	antisense		12	-1	3426740	1923
ENSMUSG00000014873	protein_coding	Surf2	ENSMUST00000135506	retained_intron		2	1	26916669	3254
ENSMUSG00000014496	protein_coding	Ankrd28	ENSMUST00000227878	nonsense_mediated_decay		14	-1	31743234	561
ENSMUSG00000004054	protein_coding	Map3k11	ENSMUST00000004156	protein_coding	principal1	19	1	5689037	3898
ENSMUSG00000071456	antisense	1110002L01Rik	ENSMUST00000179637	antisense		12	-1	3426714	586
ENSMUSG00000002781	protein_coding	Tmem143	ENSMUST00000209350	protein_coding		7	1	45897101	2466
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000108714	protein_coding		11	-1	61494296	3069
ENSMUSG00000046396	protein_coding	Olfr609	ENSMUST00000055787	protein_coding	principal1	7	-1	103492879	965
ENSMUSG00000042298	protein_coding	Ttc19	ENSMUST00000136477	processed_transcript		11	1	62281473	1025
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000238889	protein_coding		2	1	20510047	1391
ENSMUSG00000014873	protein_coding	Surf2	ENSMUST00000157066	processed_transcript		2	1	26916813	736
ENSMUSG00000014496	protein_coding	Ankrd28	ENSMUST00000228037	protein_coding		14	-1	31830378	580
ENSMUSG00000002781	protein_coding	Tmem143	ENSMUST00000210044	retained_intron		7	1	45897420	2766
ENSMUSG00000021143	protein_coding	Pacs2	ENSMUST00000223502	protein_coding	alternative2	12	1	113014508	3223
ENSMUSG00000116625	processed_pseudogene	Gm8134	ENSMUST00000231398	processed_pseudogene		16	1	23092943	1523
ENSMUSG00000014873	protein_coding	Surf2	ENSMUST00000143098	processed_transcript		2	1	26917428	501
ENSMUSG00000004054	protein_coding	Map3k11	ENSMUST00000237032	processed_transcript		19	1	5689134	670
ENSMUSG00000014496	protein_coding	Ankrd28	ENSMUST00000226963	retained_intron		14	-1	31747450	597
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000153441	protein_coding		11	-1	61490938	609
ENSMUSG00000002781	protein_coding	Tmem143	ENSMUST00000210692	processed_transcript		7	1	45897423	619
ENSMUSG00000023064	protein_coding	Sncg	ENSMUST00000023826	protein_coding	principal1	14	-1	34374789	852
ENSMUSG00000071456	antisense	1110002L01Rik	ENSMUST00000180149	antisense		12	-1	3426747	948
ENSMUSG00000090636	processed_pseudogene	Gm17069	ENSMUST00000172256	processed_pseudogene		14	-1	5101787	490
ENSMUSG00000030638	protein_coding	Sh3gl3	ENSMUST00000180183	processed_transcript		7	1	82174195	656
ENSMUSG00000118499	processed_pseudogene	AC160138.1	ENSMUST00000239031	processed_pseudogene		12	1	3438515	375
ENSMUSG00000063358	protein_coding	Mapk1	ENSMUST00000232611	protein_coding	principal1	16	1	16983382	2390
ENSMUSG00000002781	protein_coding	Tmem143	ENSMUST00000210574	processed_transcript		7	1	45908855	217
ENSMUSG00000014496	protein_coding	Ankrd28	ENSMUST00000227937	retained_intron		14	-1	31781549	4449
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000159975	protein_coding		7	1	29134933	2296
ENSMUSG00000042298	protein_coding	Ttc19	ENSMUST00000154976	processed_transcript		11	1	62309042	961
ENSMUSG00000004054	protein_coding	Map3k11	ENSMUST00000235891	nonsense_mediated_decay		19	1	5690497	2885
ENSMUSG00000002781	protein_coding	Tmem143	ENSMUST00000211280	retained_intron		7	1	45915998	840
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000126495	processed_transcript		11	-1	61493705	714
ENSMUSG00000113990	processed_pseudogene	Gm47263	ENSMUST00000222352	processed_pseudogene		13	-1	65333113	207
ENSMUSG00000045584	protein_coding	Olfr610	ENSMUST00000213422	processed_transcript		7	-1	103512116	1380
ENSMUSG00000031783	protein_coding	Polr2c	ENSMUST00000109521	protein_coding	principal1	8	1	94857450	1580
ENSMUSG00000021143	protein_coding	Pacs2	ENSMUST00000220541	protein_coding		12	1	113014533	3101
ENSMUSG00000114142	processed_pseudogene	Gm47264	ENSMUST00000222824	processed_pseudogene		13	1	65345127	156
ENSMUSG00000103594	lincRNA	A430034D21Rik	ENSMUST00000194339	lincRNA		1	1	136247662	1802
ENSMUSG00000004054	protein_coding	Map3k11	ENSMUST00000235661	protein_coding		19	1	5692895	363
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000032811	protein_coding	principal1	7	1	29134933	4621
ENSMUSG00000045584	protein_coding	Olfr610	ENSMUST00000217627	protein_coding	principal1	7	-1	103512122	1643
ENSMUSG00000113406	lincRNA	Gm7762	ENSMUST00000220595	lincRNA		13	-1	65348597	604
ENSMUSG00000102941	lincRNA	Gm37552	ENSMUST00000193939	lincRNA		1	-1	136255846	2520
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000129272	processed_transcript		11	-1	61494266	909
ENSMUSG00000030733	protein_coding	Sh2b1	ENSMUST00000205440	protein_coding	alternative2	7	-1	126475090	3089
ENSMUSG00000021143	protein_coding	Pacs2	ENSMUST00000222406	nonsense_mediated_decay		12	1	113014534	609
ENSMUSG00000101017	unprocessed_pseudogene	Gm21658	ENSMUST00000190025	unprocessed_pseudogene		Y	-1	78035714	696
ENSMUSG00000045584	protein_coding	Olfr610	ENSMUST00000063109	protein_coding	principal1	7	-1	103506944	948
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000139663	processed_transcript		11	-1	61494266	895
ENSMUSG00000100110	lincRNA	Gm28783	ENSMUST00000188872	lincRNA		1	1	17124747	359
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000159898	retained_intron		7	1	29134982	3712
ENSMUSG00000024902	protein_coding	Mrpl11	ENSMUST00000025836	protein_coding	principal1	19	1	4962147	3045
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000160194	protein_coding		7	1	29135006	1356
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000135521	processed_transcript		11	-1	61494406	691
ENSMUSG00000024902	protein_coding	Mrpl11	ENSMUST00000237974	protein_coding		19	1	4962330	513
ENSMUSG00000031783	protein_coding	Polr2c	ENSMUST00000212744	processed_transcript		8	1	94857501	376
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000159351	nonsense_mediated_decay		7	1	29135073	1997
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000139932	processed_transcript		11	-1	61494188	787
ENSMUSG00000031783	protein_coding	Polr2c	ENSMUST00000211939	protein_coding		8	1	94857518	3881
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000123360	processed_transcript		11	-1	61494266	990
ENSMUSG00000021143	protein_coding	Pacs2	ENSMUST00000220715	retained_intron		12	1	113062205	4035
ENSMUSG00000001034	protein_coding	Mapk7	ENSMUST00000140779	processed_transcript		11	-1	61494188	769
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000160396	protein_coding		7	1	29150196	375
ENSMUSG00000021143	protein_coding	Pacs2	ENSMUST00000221475	retained_intron		12	1	113067802	636
ENSMUSG00000021143	protein_coding	Pacs2	ENSMUST00000221382	retained_intron		12	1	113070672	726
ENSMUSG00000031783	protein_coding	Polr2c	ENSMUST00000212120	processed_transcript		8	1	94857583	530
ENSMUSG00000031783	protein_coding	Polr2c	ENSMUST00000212124	protein_coding		8	1	94857632	528
ENSMUSG00000079378	protein_coding	Gm8279	ENSMUST00000112767	protein_coding	alternative2	14	1	5131519	998
ENSMUSG00000015790	protein_coding	Surf1	ENSMUST00000142967	retained_intron		2	-1	26914759	567
ENSMUSG00000079378	protein_coding	Gm8279	ENSMUST00000165713	protein_coding	principal5	14	1	5131575	1760
ENSMUSG00000024902	protein_coding	Mrpl11	ENSMUST00000236917	protein_coding		19	1	4962348	813
ENSMUSG00000021143	protein_coding	Pacs2	ENSMUST00000084891	protein_coding	principal2	12	1	113014508	5480
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000109910	protein_coding	principal3	11	-1	4849536	4720
ENSMUSG00000079378	protein_coding	Gm8279	ENSMUST00000170040	protein_coding		14	1	5131582	612
ENSMUSG00000022359	protein_coding	Wdyhv1	ENSMUST00000067563	protein_coding	principal1	15	1	58141377	1383
ENSMUSG00000029281	protein_coding	Smr2	ENSMUST00000199635	protein_coding	alternative2	5	1	88086556	680
ENSMUSG00000030638	protein_coding	Sh3gl3	ENSMUST00000032874	protein_coding	principal1	7	1	82174796	1647
ENSMUSG00000024902	protein_coding	Mrpl11	ENSMUST00000236354	retained_intron		19	1	4962363	687
ENSMUSG00000031783	protein_coding	Polr2c	ENSMUST00000211957	retained_intron		8	1	94861385	855
ENSMUSG00000096584	protein_coding	Olfr611	ENSMUST00000216074	protein_coding	principal1	7	-1	103520846	2301
ENSMUSG00000022359	protein_coding	Wdyhv1	ENSMUST00000228761	nonsense_mediated_decay		15	1	58141392	798
ENSMUSG00000030638	protein_coding	Sh3gl3	ENSMUST00000179800	retained_intron		7	1	82174842	2006
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000208457	nonsense_mediated_decay		7	1	143866838	1434
ENSMUSG00000031783	protein_coding	Polr2c	ENSMUST00000212848	nonsense_mediated_decay		8	1	94861716	830
ENSMUSG00000024902	protein_coding	Mrpl11	ENSMUST00000235229	protein_coding		19	1	4962374	363
ENSMUSG00000096584	protein_coding	Olfr611	ENSMUST00000078108	protein_coding	principal1	7	-1	103518382	972
ENSMUSG00000022359	protein_coding	Wdyhv1	ENSMUST00000227142	protein_coding		15	1	58141408	786
ENSMUSG00000063358	protein_coding	Mapk1	ENSMUST00000069107	protein_coding	principal1	16	1	16983382	5099
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000134455	nonsense_mediated_decay		7	1	143866839	1811
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000207482	nonsense_mediated_decay		7	1	143866839	1597
ENSMUSG00000034453	protein_coding	Polr3b	ENSMUST00000077175	protein_coding	principal1	10	1	84622292	4975
ENSMUSG00000022359	protein_coding	Wdyhv1	ENSMUST00000226955	protein_coding		15	1	58141411	1094
ENSMUSG00000035811	protein_coding	Ugt2b35	ENSMUST00000031186	protein_coding	principal1	5	1	87000860	3359
ENSMUSG00000029012	protein_coding	Orc5	ENSMUST00000135906	retained_intron		5	-1	22550304	2117
ENSMUSG00000022359	protein_coding	Wdyhv1	ENSMUST00000228693	retained_intron		15	1	58141418	747
ENSMUSG00000030589	protein_coding	Rasgrp4	ENSMUST00000094617	protein_coding		7	1	29134933	4617
ENSMUSG00000022359	protein_coding	Wdyhv1	ENSMUST00000226889	protein_coding		15	1	58141437	394
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000152910	protein_coding	principal1	7	1	143866849	1507
ENSMUSG00000029281	protein_coding	Smr2	ENSMUST00000087043	protein_coding	principal3	5	1	88086556	676
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000207630	protein_coding		7	1	143866864	1483
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000208761	nonsense_mediated_decay		7	1	143866871	1898
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000208038	nonsense_mediated_decay		7	1	143866871	1820
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000207235	nonsense_mediated_decay		7	1	143866871	1473
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000208625	nonsense_mediated_decay		7	1	143866886	1352
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000208153	nonsense_mediated_decay		7	1	143866889	1273
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000207642	nonsense_mediated_decay		7	1	143867188	1437
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000207388	processed_transcript		7	1	143872610	655
ENSMUSG00000031085	protein_coding	Acte1	ENSMUST00000179036	protein_coding		7	1	143869173	990
ENSMUSG00000063358	protein_coding	Mapk1	ENSMUST00000115731	protein_coding	principal1	16	1	16983567	1747
ENSMUSG00000022359	protein_coding	Wdyhv1	ENSMUST00000227048	retained_intron		15	1	58141554	543
ENSMUSG00000029281	protein_coding	Smr2	ENSMUST00000196477	protein_coding	alternative2	5	1	88086556	676
ENSMUSG00000030638	protein_coding	Sh3gl3	ENSMUST00000177883	nonsense_mediated_decay		7	1	82174856	1388
ENSMUSG00000022359	protein_coding	Wdyhv1	ENSMUST00000226425	processed_transcript		15	1	58148333	379
ENSMUSG00000063358	protein_coding	Mapk1	ENSMUST00000231420	retained_intron		16	1	17018413	667
ENSMUSG00000029281	protein_coding	Smr2	ENSMUST00000196070	protein_coding	alternative2	5	1	88086556	813
ENSMUSG00000030638	protein_coding	Sh3gl3	ENSMUST00000177895	nonsense_mediated_decay		7	1	82174950	1486
ENSMUSG00000030733	protein_coding	Sh2b1	ENSMUST00000032978	protein_coding	principal3	7	-1	126475103	3393
ENSMUSG00000022359	protein_coding	Wdyhv1	ENSMUST00000227615	retained_intron		15	1	58153179	574
ENSMUSG00000063358	protein_coding	Mapk1	ENSMUST00000232281	retained_intron		16	1	17026026	952
ENSMUSG00000030638	protein_coding	Sh3gl3	ENSMUST00000180243	processed_transcript		7	1	82175156	685
ENSMUSG00000084415	processed_pseudogene	Gm12837	ENSMUST00000120131	processed_pseudogene		4	-1	115416454	373
ENSMUSG00000113452	processed_pseudogene	Gm18616	ENSMUST00000222898	processed_pseudogene		12	-1	87913545	1400
ENSMUSG00000063358	protein_coding	Mapk1	ENSMUST00000231821	protein_coding		16	1	17026042	659
ENSMUSG00000096619	protein_coding	Gm2035	ENSMUST00000180053	protein_coding	principal1	12	-1	87919857	435
ENSMUSG00000030638	protein_coding	Sh3gl3	ENSMUST00000179150	processed_transcript		7	1	82175234	510
ENSMUSG00000112734	sense_intronic	Gm47644	ENSMUST00000218351	sense_intronic		10	-1	53345085	1375
ENSMUSG00000063358	protein_coding	Mapk1	ENSMUST00000232067	protein_coding		16	1	17026366	592
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000034111	protein_coding	principal1	8	1	78509368	3595
ENSMUSG00000030733	protein_coding	Sh2b1	ENSMUST00000205340	protein_coding	alternative2	7	-1	126475130	3366
ENSMUSG00000099692	processed_pseudogene	Gm5696	ENSMUST00000189850	processed_pseudogene		1	-1	22030615	552
ENSMUSG00000030638	protein_coding	Sh3gl3	ENSMUST00000178526	protein_coding		7	1	82270886	763
ENSMUSG00000034453	protein_coding	Polr3b	ENSMUST00000213263	retained_intron		10	1	84622293	1387
ENSMUSG00000112734	sense_intronic	Gm47644	ENSMUST00000220401	sense_intronic		10	-1	53344234	1794
ENSMUSG00000063358	protein_coding	Mapk1	ENSMUST00000232630	retained_intron		16	1	17035338	606
ENSMUSG00000107388	lincRNA	Gm42788	ENSMUST00000201604	lincRNA		5	1	149144263	1667
ENSMUSG00000109140	TEC	Gm45089	ENSMUST00000208082	TEC		7	-1	82174704	2040
ENSMUSG00000113748	processed_pseudogene	Gm18628	ENSMUST00000220584	processed_pseudogene		12	1	87927534	475
ENSMUSG00000034453	protein_coding	Polr3b	ENSMUST00000215853	nonsense_mediated_decay		10	1	84638134	787
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000056290	protein_coding	alternative1	11	-1	4848985	2394
ENSMUSG00000100045	protein_coding	Gm20929	ENSMUST00000186578	protein_coding	principal1	Y	1	53843949	923
ENSMUSG00000105807	processed_pseudogene	Gm42622	ENSMUST00000197229	processed_pseudogene		5	1	88144704	355
ENSMUSG00000063358	protein_coding	Mapk1	ENSMUST00000232480	processed_transcript		16	1	17035592	637
ENSMUSG00000043008	protein_coding	Klhl6	ENSMUST00000058839	protein_coding	principal1	16	-1	19983037	2389
ENSMUSG00000024437	transcribed_processed_pseudogene	Gm8615	ENSMUST00000201946	processed_transcript		5	-1	149156019	737
ENSMUSG00000024437	transcribed_processed_pseudogene	Gm8615	ENSMUST00000025307	transcribed_processed_pseudogene		5	-1	149156209	771
ENSMUSG00000030733	protein_coding	Sh2b1	ENSMUST00000206664	nonsense_mediated_decay		7	-1	126473068	2909
ENSMUSG00000100418	processed_pseudogene	Gm28239	ENSMUST00000190225	processed_pseudogene		1	1	22237849	447
ENSMUSG00000034453	protein_coding	Polr3b	ENSMUST00000213543	processed_transcript		10	1	84639096	428
ENSMUSG00000107133	lincRNA	Gm42787	ENSMUST00000200879	lincRNA		5	1	149128584	1164
ENSMUSG00000030733	protein_coding	Sh2b1	ENSMUST00000205733	protein_coding	alternative2	7	-1	126474822	2956
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000141342	retained_intron		11	-1	4785107	1159
ENSMUSG00000107313	lincRNA	Gm43332	ENSMUST00000202511	lincRNA		5	1	149183183	1044
ENSMUSG00000043008	protein_coding	Klhl6	ENSMUST00000171910	retained_intron		16	-1	19966319	790
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000210630	nonsense_mediated_decay		8	1	78509392	3494
ENSMUSG00000106065	unprocessed_pseudogene	Gm42621	ENSMUST00000198114	unprocessed_pseudogene		5	1	88196988	275
ENSMUSG00000030733	protein_coding	Sh2b1	ENSMUST00000205889	protein_coding	alternative2	7	-1	126474824	3011
ENSMUSG00000043008	protein_coding	Klhl6	ENSMUST00000166801	processed_transcript		16	-1	19983007	675
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000053079	protein_coding	alternative1	11	-1	4849365	2470
ENSMUSG00000105576	processed_pseudogene	Gm42164	ENSMUST00000198881	processed_pseudogene		5	1	88210659	379
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000211286	nonsense_mediated_decay		8	1	78509450	2752
ENSMUSG00000097309	bidirectional_promoter_lncRNA	Gm17249	ENSMUST00000181277	bidirectional_promoter_lncRNA		10	-1	84622578	3500
ENSMUSG00000030733	protein_coding	Sh2b1	ENSMUST00000205497	protein_coding	alternative2	7	-1	126475050	2854
ENSMUSG00000106593	processed_pseudogene	Gm7048	ENSMUST00000199395	processed_pseudogene		5	1	88231350	1891
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000093374	protein_coding		11	-1	4820396	1795
ENSMUSG00000019470	protein_coding	Xab2	ENSMUST00000019614	protein_coding	principal1	8	-1	3621316	2677
ENSMUSG00000054364	protein_coding	Rhob	ENSMUST00000067384	protein_coding	principal1	12	-1	8500009	2349
ENSMUSG00000043008	protein_coding	Klhl6	ENSMUST00000165530	processed_transcript		16	-1	19982930	484
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000210515	nonsense_mediated_decay		8	1	78509575	866
ENSMUSG00000068824	polymorphic_pseudogene	Olfr1083-ps	ENSMUST00000117704	polymorphic_pseudogene	principal1	2	-1	86607569	943
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000209992	protein_coding		8	1	78509575	939
ENSMUSG00000030733	protein_coding	Sh2b1	ENSMUST00000206515	processed_transcript		7	-1	126470194	406
ENSMUSG00000019470	protein_coding	Xab2	ENSMUST00000159909	retained_intron		8	-1	3621302	2916
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000210703	processed_transcript		8	1	78577751	3315
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000209643	processed_transcript		8	1	78578717	121
ENSMUSG00000030733	protein_coding	Sh2b1	ENSMUST00000206643	protein_coding		7	-1	126475424	543
ENSMUSG00000019470	protein_coding	Xab2	ENSMUST00000159548	protein_coding		8	-1	3621270	854
ENSMUSG00000110804	protein_coding	Olfr1084	ENSMUST00000216851	protein_coding	principal1	2	-1	86639725	961
ENSMUSG00000090302	protein_coding	Gm7714	ENSMUST00000169154	protein_coding	principal1	5	1	88268919	685
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000211315	processed_transcript		8	1	78588616	2628
ENSMUSG00000019470	protein_coding	Xab2	ENSMUST00000159235	nonsense_mediated_decay		8	-1	3621282	911
ENSMUSG00000042436	protein_coding	Mfap4	ENSMUST00000064783	protein_coding	principal3	11	1	61485431	1722
ENSMUSG00000031684	protein_coding	Slc10a7	ENSMUST00000210132	processed_transcript		8	1	78697174	680
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000042901	protein_coding	principal1	3	1	69004738	4316
ENSMUSG00000005836	protein_coding	Gata6	ENSMUST00000234512	protein_coding		18	1	11052064	428
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000225942	protein_coding	alternative2	14	1	20348222	2151
ENSMUSG00000042436	protein_coding	Mfap4	ENSMUST00000040522	protein_coding	alternative2	11	1	61485461	939
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000136502	protein_coding		3	1	69004970	1163
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000107803	protein_coding		3	1	69004991	3983
ENSMUSG00000105112	TEC	Gm42778	ENSMUST00000199644	TEC		5	1	110978665	553
ENSMUSG00000038594	protein_coding	Cep85l	ENSMUST00000220443	protein_coding	principal2	10	-1	53379947	7425
ENSMUSG00000105027	TEC	Gm43676	ENSMUST00000197532	TEC		5	1	111197140	540
ENSMUSG00000083771	processed_pseudogene	Gm15988	ENSMUST00000118677	processed_pseudogene		5	-1	111008846	367
ENSMUSG00000042436	protein_coding	Mfap4	ENSMUST00000127073	processed_transcript		11	1	61485491	348
ENSMUSG00000038594	protein_coding	Cep85l	ENSMUST00000220376	protein_coding	alternative2	10	-1	53349823	2339
ENSMUSG00000106153	TEC	Gm43677	ENSMUST00000198098	TEC		5	1	111158311	2378
ENSMUSG00000075705	protein_coding	Msrb1	ENSMUST00000115262	protein_coding	principal1	17	1	24736642	886
ENSMUSG00000006307	protein_coding	Kmt2b	ENSMUST00000006470	protein_coding	alternative2	7	-1	30588717	8469
ENSMUSG00000038594	protein_coding	Cep85l	ENSMUST00000095691	protein_coding	alternative2	10	-1	53376114	2560
ENSMUSG00000038594	protein_coding	Cep85l	ENSMUST00000219673	processed_transcript		10	-1	53280148	272
ENSMUSG00000081104	processed_pseudogene	Gm15989	ENSMUST00000121895	processed_pseudogene		5	1	110905244	498
ENSMUSG00000038594	protein_coding	Cep85l	ENSMUST00000218596	processed_transcript		10	-1	53376137	1328
ENSMUSG00000020659	protein_coding	Cbll1	ENSMUST00000064240	protein_coding	alternative1	12	-1	31499555	3937
ENSMUSG00000111892	TEC	Gm47641	ENSMUST00000220436	TEC		10	1	53379452	1935
ENSMUSG00000041570	protein_coding	Camsap2	ENSMUST00000194808	protein_coding		1	-1	136281750	5034
ENSMUSG00000112239	processed_pseudogene	Gm17823	ENSMUST00000217830	processed_pseudogene		10	-1	53300142	1006
ENSMUSG00000039323	protein_coding	Igfbp2	ENSMUST00000047328	protein_coding	principal1	1	1	72824503	1307
ENSMUSG00000042436	protein_coding	Mfap4	ENSMUST00000126308	processed_transcript		11	1	61485516	1770
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000049658	protein_coding	principal1	19	1	4099998	4206
ENSMUSG00000075705	protein_coding	Msrb1	ENSMUST00000101800	protein_coding	principal1	17	1	24736682	1211
ENSMUSG00000004043	protein_coding	Stat5a	ENSMUST00000004145	protein_coding	principal1	11	1	100859351	3888
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000109908	processed_transcript		11	-1	4833133	2012
ENSMUSG00000107125	TEC	Gm3822	ENSMUST00000201941	TEC		5	1	66214747	2935
ENSMUSG00000005836	protein_coding	Gata6	ENSMUST00000047762	protein_coding	principal1	18	1	11052470	3234
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000152656	nonsense_mediated_decay		11	-1	4816165	642
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000164190	protein_coding		11	-1	4849194	963
ENSMUSG00000039323	protein_coding	Igfbp2	ENSMUST00000120564	protein_coding		1	1	72825322	991
ENSMUSG00000005836	protein_coding	Gata6	ENSMUST00000231831	retained_intron		18	1	11052508	3784
ENSMUSG00000004043	protein_coding	Stat5a	ENSMUST00000133036	protein_coding		11	1	100859410	336
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000155600	processed_transcript		11	-1	4815240	627
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000148385	nonsense_mediated_decay		3	1	69005008	4057
ENSMUSG00000006307	protein_coding	Kmt2b	ENSMUST00000108154	protein_coding	principal2	7	-1	30588726	8454
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000137926	protein_coding		11	-1	4818547	476
ENSMUSG00000039323	protein_coding	Igfbp2	ENSMUST00000155703	retained_intron		1	1	72848699	906
ENSMUSG00000004043	protein_coding	Stat5a	ENSMUST00000107356	protein_coding	principal1	11	1	100859656	3738
ENSMUSG00000005836	protein_coding	Gata6	ENSMUST00000235081	protein_coding		18	1	11053044	852
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000124878	nonsense_mediated_decay		11	-1	4820396	738
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000167480	processed_transcript		11	-1	4824921	341
ENSMUSG00000038583	protein_coding	Pln	ENSMUST00000219491	protein_coding	principal1	10	1	53337667	771
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000195525	nonsense_mediated_decay		3	1	69005015	784
ENSMUSG00000004043	protein_coding	Stat5a	ENSMUST00000138083	protein_coding		11	1	100860345	617
ENSMUSG00000005836	protein_coding	Gata6	ENSMUST00000234722	retained_intron		18	1	11055038	451
ENSMUSG00000006307	protein_coding	Kmt2b	ENSMUST00000131002	protein_coding		7	-1	30585340	6345
ENSMUSG00000009073	protein_coding	Nf2	ENSMUST00000172305	protein_coding		11	-1	4849125	533
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000128134	retained_intron		3	1	69016490	393
ENSMUSG00000005836	protein_coding	Gata6	ENSMUST00000234971	retained_intron		18	1	11059047	616
ENSMUSG00000038583	protein_coding	Pln	ENSMUST00000163319	protein_coding	principal1	10	1	53337685	1715
ENSMUSG00000037253	protein_coding	Mex3c	ENSMUST00000091852	protein_coding	principal1	18	1	73573044	3738
ENSMUSG00000006307	protein_coding	Kmt2b	ENSMUST00000136959	retained_intron		7	-1	30570664	571
ENSMUSG00000038583	protein_coding	Pln	ENSMUST00000220197	protein_coding	principal1	10	1	53337685	1854
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000124983	processed_transcript		3	1	69016696	496
ENSMUSG00000004043	protein_coding	Stat5a	ENSMUST00000154087	processed_transcript		11	1	100860485	3958
ENSMUSG00000006307	protein_coding	Kmt2b	ENSMUST00000128456	retained_intron		7	-1	30574174	925
ENSMUSG00000097222	processed_transcript	Gata6os	ENSMUST00000232314	bidirectional_promoter_lncRNA		18	-1	11047637	854
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000156354	retained_intron		3	1	69018915	576
ENSMUSG00000004043	protein_coding	Stat5a	ENSMUST00000135272	processed_transcript		11	1	100879019	850
ENSMUSG00000006241	protein_coding	Ccdc159	ENSMUST00000006403	protein_coding	principal3	9	1	21927471	1531
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000203002	protein_coding		18	1	69343356	482
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000194693	retained_intron		3	1	69022048	549
ENSMUSG00000040631	protein_coding	Dok4	ENSMUST00000212810	protein_coding	principal1	8	-1	94871204	2558
ENSMUSG00000096277	unprocessed_pseudogene	Gm21142	ENSMUST00000179999	unprocessed_pseudogene		7	-1	38907147	2604
ENSMUSG00000066071	protein_coding	Cyp4a12a	ENSMUST00000084343	protein_coding	principal1	4	1	115299046	2422
ENSMUSG00000006307	protein_coding	Kmt2b	ENSMUST00000152931	retained_intron		7	-1	30577164	651
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000149174	nonsense_mediated_decay		3	1	69024194	557
ENSMUSG00000099785	lincRNA	Gm28425	ENSMUST00000191542	lincRNA		Y	1	41445822	621
ENSMUSG00000099785	lincRNA	Gm28425	ENSMUST00000190439	lincRNA		Y	1	41445822	437
ENSMUSG00000004043	protein_coding	Stat5a	ENSMUST00000107357	protein_coding		11	1	100860484	3605
ENSMUSG00000038583	protein_coding	Pln	ENSMUST00000046221	protein_coding	principal1	10	1	53337693	2334
ENSMUSG00000034349	protein_coding	Smc4	ENSMUST00000128118	retained_intron		3	1	69030373	756
ENSMUSG00000046634	protein_coding	Pkd1l1	ENSMUST00000154153	protein_coding	principal5	11	-1	8973266	7631
ENSMUSG00000006307	protein_coding	Kmt2b	ENSMUST00000125836	processed_transcript		7	-1	30578994	642
ENSMUSG00000102360	TEC	Gm37043	ENSMUST00000194609	TEC		1	1	120868996	3105
ENSMUSG00000083190	unprocessed_pseudogene	Cyp4a30-ps	ENSMUST00000120813	unprocessed_pseudogene		4	1	115343788	1020
ENSMUSG00000041323	protein_coding	Ak7	ENSMUST00000040876	protein_coding	principal1	12	1	105705976	3099
ENSMUSG00000071691	protein_coding	Gm960	ENSMUST00000223788	retained_intron		19	-1	4626036	303
ENSMUSG00000006307	protein_coding	Kmt2b	ENSMUST00000125372	retained_intron		7	-1	30585074	514
ENSMUSG00000006241	protein_coding	Ccdc159	ENSMUST00000170304	protein_coding	alternative2	9	1	21927496	1519
ENSMUSG00000046634	protein_coding	Pkd1l1	ENSMUST00000155886	processed_transcript		11	-1	8863884	676
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000090499	protein_coding	principal4	14	1	20348222	2370
ENSMUSG00000071691	protein_coding	Gm960	ENSMUST00000226012	retained_intron		19	-1	4626251	438
ENSMUSG00000113509	processed_pseudogene	Gm19009	ENSMUST00000223072	processed_pseudogene		13	-1	50860156	823
ENSMUSG00000046634	protein_coding	Pkd1l1	ENSMUST00000178195	protein_coding	alternative2	11	-1	8950539	6213
ENSMUSG00000038583	protein_coding	Pln	ENSMUST00000218468	protein_coding	principal1	10	1	53337705	760
ENSMUSG00000020659	protein_coding	Cbll1	ENSMUST00000185739	protein_coding	alternative1	12	-1	31499557	3945
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000151957	retained_intron		19	1	4100046	4981
ENSMUSG00000097222	processed_transcript	Gata6os	ENSMUST00000231895	bidirectional_promoter_lncRNA		18	-1	11052530	571
ENSMUSG00000082095	processed_pseudogene	Gm11991	ENSMUST00000119652	processed_pseudogene		11	-1	8885296	1074
ENSMUSG00000105432	IG_V_gene	Gm43218	ENSMUST00000196275	IG_V_gene	principal1	6	-1	70240972	344
ENSMUSG00000038583	protein_coding	Pln	ENSMUST00000219921	protein_coding	principal1	10	1	53337705	531
ENSMUSG00000041323	protein_coding	Ak7	ENSMUST00000221981	processed_transcript		12	1	105718856	1085
ENSMUSG00000006241	protein_coding	Ccdc159	ENSMUST00000217589	retained_intron		9	1	21927612	963
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000131265	protein_coding		19	1	4100269	1043
ENSMUSG00000097222	processed_transcript	Gata6os	ENSMUST00000180789	retained_intron		18	-1	11051487	1965
ENSMUSG00000041323	protein_coding	Ak7	ENSMUST00000220702	retained_intron		12	1	105745275	585
ENSMUSG00000097222	processed_transcript	Gata6os	ENSMUST00000181316	bidirectional_promoter_lncRNA		18	-1	11052567	728
ENSMUSG00000006241	protein_coding	Ccdc159	ENSMUST00000216710	protein_coding	alternative2	9	1	21927634	1126
ENSMUSG00000042298	protein_coding	Ttc19	ENSMUST00000050646	protein_coding	principal3	11	1	62281484	3410
ENSMUSG00000040631	protein_coding	Dok4	ENSMUST00000046461	protein_coding	principal1	8	-1	94876330	2590
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000100022	protein_coding	principal1	19	1	4100622	4512
ENSMUSG00000112709	antisense	Gm19395	ENSMUST00000219618	antisense		10	1	53280281	646
ENSMUSG00000006241	protein_coding	Ccdc159	ENSMUST00000214734	nonsense_mediated_decay		9	1	21927665	1442
ENSMUSG00000040631	protein_coding	Dok4	ENSMUST00000211892	protein_coding		8	-1	94871716	352
ENSMUSG00000040631	protein_coding	Dok4	ENSMUST00000212745	protein_coding		8	-1	94876096	401
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000139427	retained_intron		19	1	4108204	662
ENSMUSG00000040883	protein_coding	Tmem205	ENSMUST00000217263	retained_intron		9	-1	21926319	671
ENSMUSG00000020659	protein_coding	Cbll1	ENSMUST00000101499	protein_coding	principal2	12	-1	31499616	3900
ENSMUSG00000097642	processed_pseudogene	Gm26866	ENSMUST00000180414	processed_pseudogene		1	1	22740764	802
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000145915	retained_intron		19	1	4109648	589
ENSMUSG00000042298	protein_coding	Ttc19	ENSMUST00000101075	protein_coding	alternative2	11	1	62281482	2193
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000145214	nonsense_mediated_decay		19	1	4109927	772
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000236992	retained_intron		19	1	4110714	462
ENSMUSG00000042298	protein_coding	Ttc19	ENSMUST00000162385	protein_coding		11	1	62283674	828
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000126620	retained_intron		19	1	4110800	656
ENSMUSG00000025209	protein_coding	Twnk	ENSMUST00000236685	protein_coding		19	1	45005663	2195
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000128798	retained_intron		19	1	4111161	733
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000237026	retained_intron		19	1	4111678	729
ENSMUSG00000015790	protein_coding	Surf1	ENSMUST00000183520	nonsense_mediated_decay		2	-1	26916300	975
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000127056	nonsense_mediated_decay		19	1	4111929	766
ENSMUSG00000020659	protein_coding	Cbll1	ENSMUST00000188326	protein_coding		12	-1	31499557	1399
ENSMUSG00000024851	protein_coding	Pitpnm1	ENSMUST00000125596	retained_intron		19	1	4112320	1038
ENSMUSG00000036216	protein_coding	Leap2	ENSMUST00000036045	protein_coding	principal1	11	-1	53423170	531
ENSMUSG00000037007	protein_coding	Zfp113	ENSMUST00000049393	protein_coding	principal1	5	-1	138155744	6470
ENSMUSG00000037007	protein_coding	Zfp113	ENSMUST00000144786	retained_intron		5	-1	138155700	503
ENSMUSG00000025209	protein_coding	Twnk	ENSMUST00000026227	protein_coding	principal1	19	1	45006558	3488
ENSMUSG00000071691	protein_coding	Gm960	ENSMUST00000225896	protein_coding	alternative2	19	-1	4698668	2202
ENSMUSG00000020659	protein_coding	Cbll1	ENSMUST00000085487	protein_coding		12	-1	31499616	1332
ENSMUSG00000037007	protein_coding	Zfp113	ENSMUST00000132318	protein_coding		5	-1	138155704	488
ENSMUSG00000026308	protein_coding	Klhl30	ENSMUST00000027533	protein_coding	principal1	1	1	91351016	3089
ENSMUSG00000037007	protein_coding	Zfp113	ENSMUST00000165640	protein_coding	principal1	5	-1	138152899	1320
ENSMUSG00000020600	protein_coding	Slc7a15	ENSMUST00000036938	protein_coding		12	-1	8599066	1907
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000225834	nonsense_mediated_decay		14	1	20348239	1828
ENSMUSG00000086522	bidirectional_promoter_lncRNA	Gm4473	ENSMUST00000145987	bidirectional_promoter_lncRNA		10	1	120899157	657
ENSMUSG00000024900	protein_coding	Cpt1a	ENSMUST00000237938	protein_coding		19	1	3322334	1583
ENSMUSG00000029012	protein_coding	Orc5	ENSMUST00000030872	protein_coding	principal1	5	-1	22550375	2103
ENSMUSG00000085558	processed_transcript	4930412C18Rik	ENSMUST00000124122	processed_transcript		4	1	9770585	2509
ENSMUSG00000033209	protein_coding	Ttc28	ENSMUST00000156290	protein_coding	principal2	5	1	110879803	10688
ENSMUSG00000071691	protein_coding	Gm960	ENSMUST00000096325	nonsense_mediated_decay		19	-1	4698315	2074
ENSMUSG00000029012	protein_coding	Orc5	ENSMUST00000199943	retained_intron		5	-1	22522666	3742
ENSMUSG00000078597	protein_coding	Cyp4a12b	ENSMUST00000094887	protein_coding	principal1	4	1	115411624	2395
ENSMUSG00000039628	protein_coding	Hs3st6	ENSMUST00000234340	nonsense_mediated_decay		17	1	24752988	1357
ENSMUSG00000044628	protein_coding	Rnf208	ENSMUST00000060818	protein_coding	principal1	2	1	25242938	1137
ENSMUSG00000085558	processed_transcript	4930412C18Rik	ENSMUST00000138390	processed_transcript		4	1	9770585	3839
ENSMUSG00000071691	protein_coding	Gm960	ENSMUST00000177696	protein_coding	principal2	19	-1	4698668	2262
ENSMUSG00000020600	protein_coding	Slc7a15	ENSMUST00000095863	protein_coding	principal1	12	-1	8539545	1467
ENSMUSG00000033209	protein_coding	Ttc28	ENSMUST00000143505	processed_transcript		5	1	110879822	1557
ENSMUSG00000029012	protein_coding	Orc5	ENSMUST00000141263	protein_coding		5	-1	22549518	1035
ENSMUSG00000040883	protein_coding	Tmem205	ENSMUST00000046831	protein_coding	principal1	9	-1	21927462	785
ENSMUSG00000044628	protein_coding	Rnf208	ENSMUST00000114355	protein_coding	principal1	2	1	25242929	1333
ENSMUSG00000117746	processed_pseudogene	Gm50372	ENSMUST00000236726	processed_pseudogene		19	1	4680115	502
ENSMUSG00000057058	protein_coding	Skap1	ENSMUST00000103154	protein_coding	principal3	11	1	96464593	1507
ENSMUSG00000025208	protein_coding	Mrpl43	ENSMUST00000097715	protein_coding	principal1	19	-1	45006442	1398
ENSMUSG00000041570	protein_coding	Camsap2	ENSMUST00000192001	protein_coding	alternative2	1	-1	136345698	6329
ENSMUSG00000033209	protein_coding	Ttc28	ENSMUST00000125470	retained_intron		5	1	111225458	692
ENSMUSG00000020600	protein_coding	Slc7a15	ENSMUST00000129465	processed_transcript		12	-1	8539566	1083
ENSMUSG00000033209	protein_coding	Ttc28	ENSMUST00000128584	processed_transcript		5	1	111233388	405
ENSMUSG00000040883	protein_coding	Tmem205	ENSMUST00000216178	retained_intron		9	-1	21921889	877
ENSMUSG00000029012	protein_coding	Orc5	ENSMUST00000142987	processed_transcript		5	-1	22550375	973
ENSMUSG00000041570	protein_coding	Camsap2	ENSMUST00000192314	protein_coding	principal4	1	-1	136345698	4916
ENSMUSG00000094071	unprocessed_pseudogene	Gm21729	ENSMUST00000180058	unprocessed_pseudogene		Y	-1	41644054	664
ENSMUSG00000018648	protein_coding	Dusp14	ENSMUST00000100705	protein_coding	principal1	11	-1	84068357	1447
ENSMUSG00000020600	protein_coding	Slc7a15	ENSMUST00000165657	protein_coding		12	-1	8539545	1467
ENSMUSG00000025208	protein_coding	Mrpl43	ENSMUST00000235259	retained_intron		19	-1	45006420	515
ENSMUSG00000005994	protein_coding	Tyrp1	ENSMUST00000102831	protein_coding	principal1	4	1	80834307	2623
ENSMUSG00000033209	protein_coding	Ttc28	ENSMUST00000129017	retained_intron		5	1	111235315	392
ENSMUSG00000040883	protein_coding	Tmem205	ENSMUST00000213698	protein_coding	principal1	9	-1	21927288	705
ENSMUSG00000039628	protein_coding	Hs3st6	ENSMUST00000044922	protein_coding	principal2	17	1	24753003	1220
ENSMUSG00000029012	protein_coding	Orc5	ENSMUST00000138248	processed_transcript		5	-1	22550429	645
ENSMUSG00000084235	transcribed_processed_pseudogene	Gm15421	ENSMUST00000118224	transcribed_processed_pseudogene		5	-1	22528719	399
ENSMUSG00000056155	protein_coding	Nanos3	ENSMUST00000211482	processed_transcript		8	-1	84185217	434
ENSMUSG00000057058	protein_coding	Skap1	ENSMUST00000100521	protein_coding		11	1	96464593	1539
ENSMUSG00000085558	processed_transcript	4930412C18Rik	ENSMUST00000146481	processed_transcript		4	1	9770651	509
ENSMUSG00000041570	protein_coding	Camsap2	ENSMUST00000192933	processed_transcript		1	-1	136297349	442
ENSMUSG00000033209	protein_coding	Ttc28	ENSMUST00000040111	protein_coding	alternative2	5	1	110879803	10780
ENSMUSG00000040883	protein_coding	Tmem205	ENSMUST00000214569	protein_coding		9	-1	21927023	879
ENSMUSG00000084235	transcribed_processed_pseudogene	Gm15421	ENSMUST00000051985	processed_transcript		5	-1	22529244	443
ENSMUSG00000112276	antisense	5033421B08Rik	ENSMUST00000219595	antisense		12	1	8511201	1194
ENSMUSG00000085558	processed_transcript	4930412C18Rik	ENSMUST00000144703	processed_transcript		4	1	9770679	2018
ENSMUSG00000005994	protein_coding	Tyrp1	ENSMUST00000133932	protein_coding		4	1	80846588	529
ENSMUSG00000041570	protein_coding	Camsap2	ENSMUST00000194730	processed_transcript		1	-1	136346090	1695
ENSMUSG00000050996	protein_coding	Cetn1	ENSMUST00000234590	nonsense_mediated_decay		18	-1	9619478	1247
ENSMUSG00000040883	protein_coding	Tmem205	ENSMUST00000215650	retained_intron		9	-1	21927556	1707
ENSMUSG00000112276	antisense	5033421B08Rik	ENSMUST00000218759	antisense		12	1	8549621	887
ENSMUSG00000085558	processed_transcript	4930412C18Rik	ENSMUST00000154082	processed_transcript		4	1	9770797	629
ENSMUSG00000105890	TEC	Gm42780	ENSMUST00000197083	TEC		5	1	111028552	734
ENSMUSG00000101018	unprocessed_pseudogene	Gm28910	ENSMUST00000185921	unprocessed_pseudogene		Y	-1	53936030	696
ENSMUSG00000057058	protein_coding	Skap1	ENSMUST00000100519	protein_coding		11	1	96464600	1100
ENSMUSG00000039628	protein_coding	Hs3st6	ENSMUST00000235111	nonsense_mediated_decay		17	1	24753016	1263
ENSMUSG00000056155	protein_coding	Nanos3	ENSMUST00000070102	protein_coding	principal2	8	-1	84176552	730
ENSMUSG00000101178	processed_pseudogene	Gm28909	ENSMUST00000189406	processed_pseudogene		Y	-1	53964144	315
ENSMUSG00000015790	protein_coding	Surf1	ENSMUST00000167661	nonsense_mediated_decay		2	-1	26916468	1151
ENSMUSG00000100366	lincRNA	Gm29568	ENSMUST00000187884	lincRNA		Y	1	78052004	356
ENSMUSG00000005994	protein_coding	Tyrp1	ENSMUST00000133655	protein_coding		4	1	80834123	1053
ENSMUSG00000004637	protein_coding	Wwox	ENSMUST00000004756	protein_coding	principal1	8	1	114439655	2244
ENSMUSG00000050996	protein_coding	Cetn1	ENSMUST00000234003	protein_coding	principal1	18	-1	9619469	1051
ENSMUSG00000039628	protein_coding	Hs3st6	ENSMUST00000234202	protein_coding	alternative2	17	1	24753016	1141
ENSMUSG00000026805	protein_coding	Barhl1	ENSMUST00000050776	protein_coding	principal1	2	-1	28916412	3666
ENSMUSG00000040883	protein_coding	Tmem205	ENSMUST00000238930	protein_coding	principal1	9	-1	21927535	862
ENSMUSG00000056155	protein_coding	Nanos3	ENSMUST00000210202	protein_coding	alternative2	8	-1	84176552	692
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000224721	protein_coding	alternative2	14	1	20348260	4483
ENSMUSG00000041570	protein_coding	Camsap2	ENSMUST00000048309	protein_coding	alternative2	1	-1	136346104	7823
ENSMUSG00000050996	protein_coding	Cetn1	ENSMUST00000062769	protein_coding	principal1	18	-1	9619478	1247
ENSMUSG00000093848	protein_coding	Gm20865	ENSMUST00000181163	protein_coding	principal1	Y	1	21241575	1225
ENSMUSG00000018648	protein_coding	Dusp14	ENSMUST00000018792	protein_coding	principal1	11	-1	84068801	1571
ENSMUSG00000004637	protein_coding	Wwox	ENSMUST00000160862	protein_coding		8	1	114439695	1715
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000090503	protein_coding		14	1	20348260	2053
ENSMUSG00000026805	protein_coding	Barhl1	ENSMUST00000124059	processed_transcript		2	-1	28912495	2522
ENSMUSG00000004637	protein_coding	Wwox	ENSMUST00000109108	protein_coding		8	1	114439695	1771
ENSMUSG00000005994	protein_coding	Tyrp1	ENSMUST00000006151	protein_coding	principal1	4	1	80834230	2720
ENSMUSG00000037313	protein_coding	Tacc3	ENSMUST00000074849	protein_coding	alternative2	5	1	33658128	2669
ENSMUSG00000052759	protein_coding	Gpr25	ENSMUST00000086395	protein_coding	principal1	1	-1	136260873	1077
ENSMUSG00000113145	unprocessed_pseudogene	Vmn2r-ps95	ENSMUST00000222423	unprocessed_pseudogene		13	-1	65364427	2316
ENSMUSG00000093848	protein_coding	Gm20865	ENSMUST00000179095	protein_coding	principal1	Y	1	21242966	856
ENSMUSG00000057058	protein_coding	Skap1	ENSMUST00000136836	retained_intron		11	1	96464624	2051
ENSMUSG00000105315	processed_pseudogene	Gm18635	ENSMUST00000199020	processed_pseudogene		5	1	87014160	1060
ENSMUSG00000026786	protein_coding	Apbb1ip	ENSMUST00000014290	protein_coding	principal1	2	1	22774094	2773
ENSMUSG00000004637	protein_coding	Wwox	ENSMUST00000160005	processed_transcript		8	1	114439702	3781
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000225991	protein_coding		14	1	20348262	696
ENSMUSG00000097433	antisense	Gm26781	ENSMUST00000181385	antisense		1	1	136259407	1477
ENSMUSG00000097120	lincRNA	Gm26887	ENSMUST00000181282	lincRNA		8	-1	84197667	547
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000037698	protein_coding		14	1	20348265	924
ENSMUSG00000004637	protein_coding	Wwox	ENSMUST00000109107	protein_coding		8	1	114439702	2383
ENSMUSG00000018648	protein_coding	Dusp14	ENSMUST00000108101	protein_coding	principal1	11	-1	84067080	1082
ENSMUSG00000057058	protein_coding	Skap1	ENSMUST00000071510	protein_coding	alternative2	11	1	96464627	1425
ENSMUSG00000113551	processed_pseudogene	Gm7768	ENSMUST00000222988	processed_pseudogene		13	-1	65368746	597
ENSMUSG00000112935	lincRNA	Gm40983	ENSMUST00000222598	lincRNA		13	1	65380329	1198
ENSMUSG00000112935	lincRNA	Gm40983	ENSMUST00000222524	lincRNA		13	1	65380343	502
ENSMUSG00000095630	IG_V_gene	Igkv6-23	ENSMUST00000103386	IG_V_gene	principal1	6	-1	70260955	369
ENSMUSG00000026805	protein_coding	Barhl1	ENSMUST00000113849	protein_coding	principal1	2	-1	28916440	2102
ENSMUSG00000057058	protein_coding	Skap1	ENSMUST00000107662	protein_coding		11	1	96464633	1861
ENSMUSG00000106003	unprocessed_pseudogene	Gm42465	ENSMUST00000197036	unprocessed_pseudogene		5	-1	87055665	492
ENSMUSG00000051279	protein_coding	Gdf6	ENSMUST00000057613	protein_coding	principal1	4	1	9844372	3532
ENSMUSG00000004637	protein_coding	Wwox	ENSMUST00000161753	processed_transcript		8	1	114448210	953
ENSMUSG00000018648	protein_coding	Dusp14	ENSMUST00000138208	protein_coding		11	-1	84069261	710
ENSMUSG00000015790	protein_coding	Surf1	ENSMUST00000015934	protein_coding	principal1	2	-1	26916530	1173
ENSMUSG00000057058	protein_coding	Skap1	ENSMUST00000107663	protein_coding		11	1	96464681	742
ENSMUSG00000026805	protein_coding	Barhl1	ENSMUST00000113847	protein_coding	principal1	2	-1	28916668	2160
ENSMUSG00000026100	protein_coding	Mstn	ENSMUST00000027269	protein_coding	principal1	1	1	53061640	2705
ENSMUSG00000113476	TEC	Gm48309	ENSMUST00000220829	TEC		12	-1	13425717	2458
ENSMUSG00000004637	protein_coding	Wwox	ENSMUST00000160205	processed_transcript		8	1	114608436	432
ENSMUSG00000057058	protein_coding	Skap1	ENSMUST00000149988	processed_transcript		11	1	96483782	2095
ENSMUSG00000103593	TEC	Gm37352	ENSMUST00000193908	TEC		8	1	84200869	2181
ENSMUSG00000078201	protein_coding	Tmem203	ENSMUST00000104998	protein_coding	principal1	2	1	25255439	854
ENSMUSG00000071414	processed_pseudogene	Gm6736	ENSMUST00000166583	processed_pseudogene		12	-1	13455970	948
ENSMUSG00000004637	protein_coding	Wwox	ENSMUST00000159870	processed_transcript		8	1	114712167	560
ENSMUSG00000113301	processed_pseudogene	Gm48103	ENSMUST00000221922	processed_pseudogene		13	-1	65396138	132
ENSMUSG00000057058	protein_coding	Skap1	ENSMUST00000127639	retained_intron		11	1	96489861	643
ENSMUSG00000018648	protein_coding	Dusp14	ENSMUST00000164891	protein_coding	principal1	11	-1	84068579	1454
ENSMUSG00000004637	protein_coding	Wwox	ENSMUST00000162052	processed_transcript		8	1	114712167	683
ENSMUSG00000057058	protein_coding	Skap1	ENSMUST00000123814	retained_intron		11	1	96708235	706
ENSMUSG00000026805	protein_coding	Barhl1	ENSMUST00000174027	processed_transcript		2	-1	28915505	793
ENSMUSG00000015790	protein_coding	Surf1	ENSMUST00000129822	nonsense_mediated_decay		2	-1	26916320	860
ENSMUSG00000026100	protein_coding	Mstn	ENSMUST00000191197	protein_coding		1	1	53061657	2461
ENSMUSG00000102429	lincRNA	Gm37462	ENSMUST00000193386	lincRNA		Y	-1	21349473	1498
ENSMUSG00000113911	processed_pseudogene	Gm21930	ENSMUST00000220797	processed_pseudogene		13	-1	65397678	1124
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000224079	retained_intron		14	1	20348275	1686
ENSMUSG00000067279	protein_coding	Ppp1r3c	ENSMUST00000087321	protein_coding	principal1	19	-1	36736653	2725
ENSMUSG00000113388	processed_pseudogene	Gm48111	ENSMUST00000221482	processed_pseudogene		13	1	65404296	3841
ENSMUSG00000037313	protein_coding	Tacc3	ENSMUST00000079534	protein_coding	principal3	5	1	33658128	2899
ENSMUSG00000026786	protein_coding	Apbb1ip	ENSMUST00000131195	processed_transcript		2	1	22774094	1356
ENSMUSG00000053367	protein_coding	Epp13	ENSMUST00000121024	protein_coding	principal1	7	1	6252710	957
ENSMUSG00000026786	protein_coding	Apbb1ip	ENSMUST00000148315	processed_transcript		2	1	22774390	4061
ENSMUSG00000102429	lincRNA	Gm37462	ENSMUST00000194672	lincRNA		Y	-1	21349020	621
ENSMUSG00000089797	antisense	Gm16118	ENSMUST00000161914	antisense		8	-1	114708006	680
ENSMUSG00000026786	protein_coding	Apbb1ip	ENSMUST00000132993	retained_intron		2	1	22774445	2276
ENSMUSG00000102429	lincRNA	Gm37462	ENSMUST00000193841	lincRNA		Y	-1	21349020	437
ENSMUSG00000115074	protein_coding	Ndor1	ENSMUST00000228052	protein_coding	principal1	2	-1	25255386	3210
ENSMUSG00000037313	protein_coding	Tacc3	ENSMUST00000201633	protein_coding		5	1	33658147	1242
ENSMUSG00000097296	lincRNA	Gm26532	ENSMUST00000180630	lincRNA		8	1	84208920	690
ENSMUSG00000082435	processed_pseudogene	Gm13813	ENSMUST00000120998	processed_pseudogene		2	-1	100408279	787
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000224242	processed_transcript		14	1	20351371	372
ENSMUSG00000053367	protein_coding	Epp13	ENSMUST00000128903	nonsense_mediated_decay		7	1	6258613	520
ENSMUSG00000089723	antisense	Gm16117	ENSMUST00000160544	antisense		8	-1	114642114	324
ENSMUSG00000053367	protein_coding	Epp13	ENSMUST00000155248	protein_coding		7	1	6260536	684
ENSMUSG00000082843	transcribed_processed_pseudogene	4930448K20Rik	ENSMUST00000182072	processed_transcript		4	-1	9917397	1433
ENSMUSG00000115018	protein_coding	Ndor1	ENSMUST00000228627	protein_coding	principal1	2	-1	25246863	2045
ENSMUSG00000015790	protein_coding	Surf1	ENSMUST00000147110	protein_coding		2	-1	26916345	853
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000225114	processed_transcript		14	1	20352728	595
ENSMUSG00000037984	protein_coding	Neurod6	ENSMUST00000044767	protein_coding	principal1	6	-1	55681263	2150
ENSMUSG00000090217	antisense	Gm16116	ENSMUST00000159472	antisense		8	-1	114594900	430
ENSMUSG00000113207	processed_pseudogene	Cbx3-ps5	ENSMUST00000091545	processed_pseudogene		13	1	65416601	544
ENSMUSG00000024900	protein_coding	Cpt1a	ENSMUST00000025835	protein_coding	principal1	19	1	3323285	4317
ENSMUSG00000082843	transcribed_processed_pseudogene	4930448K20Rik	ENSMUST00000120570	transcribed_processed_pseudogene		4	-1	9917635	998
ENSMUSG00000037313	protein_coding	Tacc3	ENSMUST00000152847	protein_coding		5	1	33658554	440
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000224670	retained_intron		14	1	20359482	805
ENSMUSG00000098065	transcribed_processed_pseudogene	Gm5177	ENSMUST00000183337	processed_transcript		10	1	10605945	3785
ENSMUSG00000102849	unprocessed_pseudogene	Gm37658	ENSMUST00000192672	unprocessed_pseudogene		Y	1	21389972	315
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000225837	retained_intron		14	1	20378038	817
ENSMUSG00000015790	protein_coding	Surf1	ENSMUST00000150776	retained_intron		2	-1	26916311	755
ENSMUSG00000098065	transcribed_processed_pseudogene	Gm5177	ENSMUST00000183092	transcribed_processed_pseudogene		10	1	10613051	997
ENSMUSG00000024900	protein_coding	Cpt1a	ENSMUST00000235968	retained_intron		19	1	3323348	2513
ENSMUSG00000084095	processed_pseudogene	Gm11834	ENSMUST00000122257	processed_pseudogene		4	1	9958208	585
ENSMUSG00000000374	protein_coding	Trappc10	ENSMUST00000000384	protein_coding	principal1	10	-1	78244641	5047
ENSMUSG00000024900	protein_coding	Cpt1a	ENSMUST00000237562	protein_coding		19	1	3333725	659
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000223898	retained_intron		14	1	20378602	420
ENSMUSG00000015790	protein_coding	Surf1	ENSMUST00000128665	retained_intron		2	-1	26915492	482
ENSMUSG00000117402	processed_pseudogene	Gm4834	ENSMUST00000234246	processed_pseudogene		18	1	9628862	3618
ENSMUSG00000024900	protein_coding	Cpt1a	ENSMUST00000238015	protein_coding		19	1	3341627	1012
ENSMUSG00000102513	unprocessed_pseudogene	Gm32347	ENSMUST00000192944	unprocessed_pseudogene		Y	1	21426544	696
ENSMUSG00000015790	protein_coding	Surf1	ENSMUST00000129682	nonsense_mediated_decay		2	-1	26916332	389
ENSMUSG00000082501	processed_pseudogene	Gm11835	ENSMUST00000120635	processed_pseudogene		4	1	9959354	663
ENSMUSG00000114065	unprocessed_pseudogene	Vmn2r-ps96	ENSMUST00000221218	unprocessed_pseudogene		13	-1	65435539	2545
ENSMUSG00000024900	protein_coding	Cpt1a	ENSMUST00000237457	retained_intron		19	1	3366330	451
ENSMUSG00000074913	protein_coding	Gm815	ENSMUST00000235850	protein_coding	alternative2	19	1	26885881	779
ENSMUSG00000039599	protein_coding	Fam149b	ENSMUST00000051915	protein_coding	alternative2	14	1	20348222	1981
ENSMUSG00000015790	protein_coding	Surf1	ENSMUST00000133513	protein_coding		2	-1	26916345	336
ENSMUSG00000084215	processed_pseudogene	Gm11814	ENSMUST00000119515	processed_pseudogene		4	-1	10439743	929
ENSMUSG00000024900	protein_coding	Cpt1a	ENSMUST00000237444	retained_intron		19	1	3375040	466
ENSMUSG00000000374	protein_coding	Trappc10	ENSMUST00000219948	retained_intron		10	-1	78199099	870
ENSMUSG00000108566	processed_pseudogene	Gm45031	ENSMUST00000206800	processed_pseudogene		7	-1	116492404	288
ENSMUSG00000102966	unprocessed_pseudogene	Gm31123	ENSMUST00000192094	unprocessed_pseudogene		Y	-1	21512364	666
ENSMUSG00000101536	lincRNA	Gm28834	ENSMUST00000190714	lincRNA		Y	-1	41769112	537
ENSMUSG00000000374	protein_coding	Trappc10	ENSMUST00000217858	nonsense_mediated_decay		10	-1	78204220	665
ENSMUSG00000101536	lincRNA	Gm28834	ENSMUST00000187847	lincRNA		Y	-1	41769112	352
ENSMUSG00000074913	protein_coding	Gm815	ENSMUST00000099536	protein_coding	principal2	19	1	26885925	618
ENSMUSG00000024900	protein_coding	Cpt1a	ENSMUST00000238027	retained_intron		19	1	3376344	839
ENSMUSG00000012211	protein_coding	Tex22	ENSMUST00000012355	protein_coding	principal1	12	1	113074502	1267
ENSMUSG00000025591	protein_coding	Tma16	ENSMUST00000026681	protein_coding	principal1	8	-1	66486519	4328
ENSMUSG00000071379	protein_coding	Hpcal1	ENSMUST00000071858	protein_coding	principal1	12	1	17690856	1526
ENSMUSG00000000374	protein_coding	Trappc10	ENSMUST00000218124	retained_intron		10	-1	78209234	3651
ENSMUSG00000000374	protein_coding	Trappc10	ENSMUST00000217980	nonsense_mediated_decay		10	-1	78244622	676
ENSMUSG00000071379	protein_coding	Hpcal1	ENSMUST00000222944	protein_coding		12	1	17728226	697
ENSMUSG00000085427	lincRNA	6430710C18Rik	ENSMUST00000136807	lincRNA		2	-1	72813672	1540
ENSMUSG00000078365	protein_coding	Mos	ENSMUST00000105158	protein_coding	principal1	4	-1	3872105	1449
ENSMUSG00000012211	protein_coding	Tex22	ENSMUST00000146107	protein_coding	principal1	12	1	113074502	1130
ENSMUSG00000037313	protein_coding	Tacc3	ENSMUST00000114426	protein_coding	principal3	5	1	33658586	2187
ENSMUSG00000113294	unprocessed_pseudogene	Gm49326	ENSMUST00000223226	unprocessed_pseudogene		12	1	17882197	126
ENSMUSG00000113612	processed_pseudogene	Gm48315	ENSMUST00000222538	processed_pseudogene		12	-1	17895472	161
ENSMUSG00000025591	protein_coding	Tma16	ENSMUST00000143972	nonsense_mediated_decay		8	-1	66486497	3150
ENSMUSG00000012211	protein_coding	Tex22	ENSMUST00000109729	protein_coding	principal1	12	1	113074756	735
ENSMUSG00000037313	protein_coding	Tacc3	ENSMUST00000139453	retained_intron		5	1	33658634	888
ENSMUSG00000066551	protein_coding	Hmgb1	ENSMUST00000085546	protein_coding	principal1	5	-1	149053040	2838
ENSMUSG00000042042	protein_coding	Csgalnact2	ENSMUST00000125531	retained_intron		6	-1	118129620	5252
ENSMUSG00000012211	protein_coding	Tex22	ENSMUST00000155492	protein_coding		12	1	113074778	344
ENSMUSG00000037343	protein_coding	Taf2	ENSMUST00000041733	protein_coding	principal1	15	-1	55072152	5031
ENSMUSG00000085427	lincRNA	6430710C18Rik	ENSMUST00000148327	lincRNA		2	-1	72813717	1014
ENSMUSG00000108596	protein_coding	Gm49368	ENSMUST00000098015	protein_coding	principal1	7	1	128062683	4803
ENSMUSG00000085427	lincRNA	6430710C18Rik	ENSMUST00000125746	lincRNA		2	-1	72800154	509
ENSMUSG00000066551	protein_coding	Hmgb1	ENSMUST00000110505	protein_coding	principal1	5	-1	149051300	1720
ENSMUSG00000044894	protein_coding	Uqcrq	ENSMUST00000061326	protein_coding	principal1	11	-1	53430827	1521
ENSMUSG00000108596	protein_coding	Gm49368	ENSMUST00000134694	protein_coding		7	1	128116436	477
ENSMUSG00000025591	protein_coding	Tma16	ENSMUST00000145787	retained_intron		8	-1	66486530	1895
ENSMUSG00000085427	lincRNA	6430710C18Rik	ENSMUST00000125382	lincRNA		2	-1	72750853	511
ENSMUSG00000025591	protein_coding	Tma16	ENSMUST00000213036	retained_intron		8	-1	66486521	1787
ENSMUSG00000101023	processed_pseudogene	Gm21152	ENSMUST00000190271	processed_pseudogene		7	-1	38922202	3483
ENSMUSG00000021395	protein_coding	Spin1	ENSMUST00000095797	protein_coding	principal1	13	1	51100880	4434
ENSMUSG00000037343	protein_coding	Taf2	ENSMUST00000228345	processed_transcript		15	-1	55022839	1039
ENSMUSG00000101035	processed_pseudogene	Gm28451	ENSMUST00000189311	processed_pseudogene		7	-1	38956969	2560
ENSMUSG00000101703	unprocessed_pseudogene	Gm1982	ENSMUST00000188615	unprocessed_pseudogene		7	-1	39139779	1887
ENSMUSG00000037343	protein_coding	Taf2	ENSMUST00000228896	processed_transcript		15	-1	55022782	440
ENSMUSG00000101454	unprocessed_pseudogene	Gm1988	ENSMUST00000188190	unprocessed_pseudogene		7	-1	39174260	2565
ENSMUSG00000066551	protein_coding	Hmgb1	ENSMUST00000093196	protein_coding	principal1	5	-1	149051616	1092
ENSMUSG00000037343	protein_coding	Taf2	ENSMUST00000228360	retained_intron		15	-1	55046166	1095
ENSMUSG00000102017	unprocessed_pseudogene	Gm6124	ENSMUST00000188240	unprocessed_pseudogene		7	-1	39223175	2580
ENSMUSG00000044894	protein_coding	Uqcrq	ENSMUST00000109019	protein_coding		11	-1	53430434	504
ENSMUSG00000066551	protein_coding	Hmgb1	ENSMUST00000202133	protein_coding		5	-1	149184489	685
ENSMUSG00000021395	protein_coding	Spin1	ENSMUST00000223152	processed_transcript		13	1	51134319	4085
ENSMUSG00000066551	protein_coding	Hmgb1	ENSMUST00000155086	retained_intron		5	-1	149050447	902
ENSMUSG00000106080	processed_pseudogene	Gm8836	ENSMUST00000198196	processed_pseudogene		6	1	70262565	1348
ENSMUSG00000044894	protein_coding	Uqcrq	ENSMUST00000109021	protein_coding	principal1	11	-1	53430827	405
ENSMUSG00000110500	lincRNA	Gm32568	ENSMUST00000212782	lincRNA		8	1	66495059	1421
ENSMUSG00000117938	processed_pseudogene	Gm50112	ENSMUST00000236351	processed_pseudogene		19	1	36818648	283
ENSMUSG00000113596	processed_pseudogene	Gm48452	ENSMUST00000222510	processed_pseudogene		13	1	100467932	256
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000042055	protein_coding	principal1	2	1	30416039	2586
ENSMUSG00000066551	protein_coding	Hmgb1	ENSMUST00000139443	protein_coding		5	-1	149053011	923
ENSMUSG00000066551	protein_coding	Hmgb1	ENSMUST00000138553	protein_coding		5	-1	149052377	428
ENSMUSG00000044894	protein_coding	Uqcrq	ENSMUST00000156503	processed_transcript		11	-1	53430831	375
ENSMUSG00000097653	unprocessed_pseudogene	Gm16387	ENSMUST00000180990	unprocessed_pseudogene		7	-1	39262358	2632
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000113601	protein_coding		2	1	30416131	1838
ENSMUSG00000037343	protein_coding	Taf2	ENSMUST00000226864	retained_intron		15	-1	55071899	2713
ENSMUSG00000043065	protein_coding	Spice1	ENSMUST00000050897	protein_coding	principal1	16	1	44347121	4627
ENSMUSG00000108063	lincRNA	Gm3279	ENSMUST00000203099	lincRNA		6	1	55684571	1092
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000152165	nonsense_mediated_decay		2	1	30416137	473
ENSMUSG00000037343	protein_coding	Taf2	ENSMUST00000227254	retained_intron		15	-1	55052421	690
ENSMUSG00000118313	processed_pseudogene	Gm50121	ENSMUST00000236369	processed_pseudogene		19	1	27025981	334
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000113603	protein_coding		2	1	30416142	2169
ENSMUSG00000118185	processed_pseudogene	Gm50126	ENSMUST00000235991	processed_pseudogene		18	1	73667204	274
ENSMUSG00000066551	protein_coding	Hmgb1	ENSMUST00000133667	retained_intron		5	-1	149053016	654
ENSMUSG00000118209	lincRNA	Gm35438	ENSMUST00000235490	lincRNA		19	-1	27115485	429
ENSMUSG00000118209	lincRNA	Gm35438	ENSMUST00000236708	lincRNA		19	-1	27102697	187
ENSMUSG00000066551	protein_coding	Hmgb1	ENSMUST00000125605	protein_coding		5	-1	149053513	604
ENSMUSG00000066551	protein_coding	Hmgb1	ENSMUST00000123645	retained_intron		5	-1	149052981	461
ENSMUSG00000070704	protein_coding	Ugt2b36	ENSMUST00000094649	protein_coding	principal1	5	-1	87092555	1888
ENSMUSG00000022141	protein_coding	Nipbl	ENSMUST00000052965	protein_coding	principal1	15	-1	8444463	9423
ENSMUSG00000118020	lincRNA	Gm35438	ENSMUST00000235406	lincRNA		19	-1	27192009	1785
ENSMUSG00000070704	protein_coding	Ugt2b36	ENSMUST00000145617	protein_coding		5	-1	87092548	773
ENSMUSG00000018238	protein_coding	Gdf9	ENSMUST00000156037	processed_transcript		11	1	53431023	429
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000125743	retained_intron		2	1	30416196	3738
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000159932	processed_transcript		2	1	30416302	118
ENSMUSG00000020576	protein_coding	Nbas	ENSMUST00000042953	protein_coding	principal1	12	1	13269133	7234
ENSMUSG00000018238	protein_coding	Gdf9	ENSMUST00000145369	processed_transcript		11	1	53432842	382
ENSMUSG00000094119	protein_coding	Olfr612	ENSMUST00000215663	protein_coding	principal1	7	-1	103542525	2473
ENSMUSG00000070704	protein_coding	Ugt2b36	ENSMUST00000154455	retained_intron		5	-1	87091157	790
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000128516	retained_intron		2	1	30428354	825
ENSMUSG00000094119	protein_coding	Olfr612	ENSMUST00000214269	protein_coding	principal1	7	-1	103542717	2420
ENSMUSG00000014867	protein_coding	Surf4	ENSMUST00000015011	protein_coding	principal1	2	-1	26933928	3281
ENSMUSG00000070704	protein_coding	Ugt2b36	ENSMUST00000132667	protein_coding		5	-1	87092546	818
ENSMUSG00000020576	protein_coding	Nbas	ENSMUST00000221212	retained_intron		12	1	13328345	1320
ENSMUSG00000094119	protein_coding	Olfr612	ENSMUST00000104879	protein_coding	principal1	7	-1	103539232	972
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000125561	nonsense_mediated_decay		2	1	30438229	1040
ENSMUSG00000043065	protein_coding	Spice1	ENSMUST00000155661	processed_transcript		16	1	44347414	933
ENSMUSG00000028836	protein_coding	Slc30a2	ENSMUST00000105873	protein_coding		4	1	134343181	1224
ENSMUSG00000027931	protein_coding	Npr1	ENSMUST00000029540	protein_coding	principal1	3	-1	90465866	4066
ENSMUSG00000025917	protein_coding	Cops5	ENSMUST00000027050	protein_coding	principal1	1	-1	10038127	1698
ENSMUSG00000043065	protein_coding	Spice1	ENSMUST00000132663	processed_transcript		16	1	44348046	654
ENSMUSG00000042042	protein_coding	Csgalnact2	ENSMUST00000049344	protein_coding	principal1	6	-1	118139140	3661
ENSMUSG00000043065	protein_coding	Spice1	ENSMUST00000152425	retained_intron		16	1	44367651	625
ENSMUSG00000014867	protein_coding	Surf4	ENSMUST00000153641	nonsense_mediated_decay		2	-1	26933383	737
ENSMUSG00000042042	protein_coding	Csgalnact2	ENSMUST00000136265	protein_coding		6	-1	118126406	802
ENSMUSG00000025917	protein_coding	Cops5	ENSMUST00000190155	nonsense_mediated_decay		1	-1	10035128	877
ENSMUSG00000043065	protein_coding	Spice1	ENSMUST00000135340	retained_intron		16	1	44367721	621
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000131476	protein_coding		2	1	30441853	989
ENSMUSG00000084960	antisense	B430010I23Rik	ENSMUST00000123703	antisense		8	1	41017468	2349
ENSMUSG00000014867	protein_coding	Surf4	ENSMUST00000154651	protein_coding		2	-1	26933781	371
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000185942	protein_coding		1	-1	22432843	2189
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000136009	protein_coding		2	1	30442735	810
ENSMUSG00000018238	protein_coding	Gdf9	ENSMUST00000018382	protein_coding	principal1	11	1	53433299	1793
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000137741	processed_transcript		2	1	30443219	702
ENSMUSG00000028804	protein_coding	Csmd2	ENSMUST00000129619	retained_intron		4	1	127987857	3034
ENSMUSG00000084302	processed_pseudogene	Gm12194	ENSMUST00000117756	processed_pseudogene		11	-1	50127918	1012
ENSMUSG00000020576	protein_coding	Nbas	ENSMUST00000221714	processed_transcript		12	1	13487122	1768
ENSMUSG00000027931	protein_coding	Npr1	ENSMUST00000124760	nonsense_mediated_decay		3	-1	90461421	790
ENSMUSG00000084960	antisense	B430010I23Rik	ENSMUST00000152188	antisense		8	1	41017738	1168
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000130741	processed_transcript		2	1	30445656	745
ENSMUSG00000072963	bidirectional_promoter_lncRNA	Gm10447	ENSMUST00000084653	bidirectional_promoter_lncRNA		11	-1	53457110	2307
ENSMUSG00000020576	protein_coding	Nbas	ENSMUST00000223081	retained_intron		12	1	13487136	1967
ENSMUSG00000037313	protein_coding	Tacc3	ENSMUST00000138240	protein_coding		5	1	33668661	679
ENSMUSG00000086773	antisense	Gm16192	ENSMUST00000148357	antisense		8	1	41039756	937
ENSMUSG00000020576	protein_coding	Nbas	ENSMUST00000223424	processed_transcript		12	1	13504878	530
ENSMUSG00000039515	protein_coding	Ptpa	ENSMUST00000135105	processed_transcript		2	1	30445716	635
ENSMUSG00000113188	processed_pseudogene	Gm35638	ENSMUST00000220724	processed_pseudogene		12	-1	13437098	652
ENSMUSG00000037313	protein_coding	Tacc3	ENSMUST00000139888	protein_coding		5	1	33668724	823
ENSMUSG00000027931	protein_coding	Npr1	ENSMUST00000146991	retained_intron		3	-1	90458939	643
ENSMUSG00000113058	antisense	Gm48311	ENSMUST00000222785	antisense		12	-1	13487047	629
ENSMUSG00000043065	protein_coding	Spice1	ENSMUST00000133168	retained_intron		16	1	44370024	1989
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000239339	processed_transcript		1	-1	22509422	863
ENSMUSG00000100888	unprocessed_pseudogene	Gm29567	ENSMUST00000191188	unprocessed_pseudogene		Y	-1	78065298	615
ENSMUSG00000107441	lincRNA	Gm31747	ENSMUST00000204638	lincRNA		6	-1	73608673	3086
ENSMUSG00000028804	protein_coding	Csmd2	ENSMUST00000144298	retained_intron		4	1	127988044	4104
ENSMUSG00000043065	protein_coding	Spice1	ENSMUST00000145663	processed_transcript		16	1	44370466	666
ENSMUSG00000100433	unprocessed_pseudogene	Gm21198	ENSMUST00000188393	unprocessed_pseudogene		Y	-1	78102200	696
ENSMUSG00000043065	protein_coding	Spice1	ENSMUST00000126228	retained_intron		16	1	44385384	681
ENSMUSG00000117379	lincRNA	Gm50022	ENSMUST00000234130	lincRNA		17	1	24779703	1170
ENSMUSG00000027931	protein_coding	Npr1	ENSMUST00000142243	processed_transcript		3	-1	90457476	767
ENSMUSG00000102111	lincRNA	Gm29566	ENSMUST00000190627	lincRNA		Y	-1	78157505	457
ENSMUSG00000101060	lincRNA	Gm29565	ENSMUST00000186260	lincRNA		Y	1	78150852	1499
ENSMUSG00000025917	protein_coding	Cops5	ENSMUST00000186528	nonsense_mediated_decay		1	-1	10037941	962
ENSMUSG00000027931	protein_coding	Npr1	ENSMUST00000152510	retained_intron		3	-1	90451781	949
ENSMUSG00000101060	lincRNA	Gm29565	ENSMUST00000185255	lincRNA		Y	1	78151305	438
ENSMUSG00000025917	protein_coding	Cops5	ENSMUST00000188619	protein_coding		1	-1	10038149	771
ENSMUSG00000025917	protein_coding	Cops5	ENSMUST00000139578	retained_intron		1	-1	10037938	2204
ENSMUSG00000022677	protein_coding	Fopnl	ENSMUST00000120707	protein_coding	alternative2	16	-1	14317347	1414
ENSMUSG00000025917	protein_coding	Cops5	ENSMUST00000150509	retained_intron		1	-1	10038168	898
ENSMUSG00000028836	protein_coding	Slc30a2	ENSMUST00000105874	protein_coding	principal2	4	1	134343206	3153
ENSMUSG00000025917	protein_coding	Cops5	ENSMUST00000191296	retained_intron		1	-1	10037945	666
ENSMUSG00000085575	antisense	Gm15485	ENSMUST00000149095	antisense		18	1	16728733	258
ENSMUSG00000087411	antisense	Gm16048	ENSMUST00000134250	antisense		3	1	90451583	663
ENSMUSG00000028836	protein_coding	Slc30a2	ENSMUST00000105872	protein_coding	alternative2	4	1	134343466	3102
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000190610	retained_intron		1	1	10037987	1356
ENSMUSG00000028836	protein_coding	Slc30a2	ENSMUST00000081094	protein_coding	alternative2	4	1	134343709	2023
ENSMUSG00000025613	protein_coding	Cct8	ENSMUST00000026704	protein_coding	principal1	16	-1	87495873	2394
ENSMUSG00000038330	protein_coding	C87499	ENSMUST00000107143	protein_coding	alternative2	4	-1	88634211	1431
ENSMUSG00000022677	protein_coding	Fopnl	ENSMUST00000023357	protein_coding	principal2	16	-1	14317375	1465
ENSMUSG00000075176	protein_coding	Olfr1085	ENSMUST00000213279	protein_coding	principal1	2	-1	86662006	5191
ENSMUSG00000075176	protein_coding	Olfr1085	ENSMUST00000214566	protein_coding	principal1	2	-1	86662019	5129
ENSMUSG00000105526	TEC	Gm43490	ENSMUST00000197593	TEC		5	1	16107129	2652
ENSMUSG00000022677	protein_coding	Fopnl	ENSMUST00000230495	processed_transcript		16	-1	14317344	1147
ENSMUSG00000075176	protein_coding	Olfr1085	ENSMUST00000099879	protein_coding	principal1	2	-1	86658456	942
ENSMUSG00000022677	protein_coding	Fopnl	ENSMUST00000148278	processed_transcript		16	-1	14317332	807
ENSMUSG00000022677	protein_coding	Fopnl	ENSMUST00000126427	retained_intron		16	-1	14317405	4621
ENSMUSG00000085612	antisense	Gm15868	ENSMUST00000144291	antisense		16	1	14311841	520
ENSMUSG00000086943	lincRNA	4732414G09Rik	ENSMUST00000180695	lincRNA		11	-1	73018804	408
ENSMUSG00000025613	protein_coding	Cct8	ENSMUST00000177376	nonsense_mediated_decay		16	-1	87495788	1567
ENSMUSG00000025613	protein_coding	Cct8	ENSMUST00000175977	protein_coding		16	-1	87495788	1470
ENSMUSG00000025613	protein_coding	Cct8	ENSMUST00000175750	protein_coding		16	-1	87488843	716
ENSMUSG00000086943	lincRNA	4732414G09Rik	ENSMUST00000156243	lincRNA		11	-1	73018841	2422
ENSMUSG00000116025	processed_pseudogene	Gm49517	ENSMUST00000229451	processed_pseudogene		16	1	14358432	466
ENSMUSG00000025777	protein_coding	Gdap1	ENSMUST00000026879	protein_coding	principal1	1	1	17145362	3949
ENSMUSG00000037973	protein_coding	Itprid1	ENSMUST00000044729	protein_coding	principal1	6	1	55836895	3431
ENSMUSG00000025613	protein_coding	Cct8	ENSMUST00000177485	retained_intron		16	-1	87486070	543
ENSMUSG00000025613	protein_coding	Cct8	ENSMUST00000176241	retained_intron		16	-1	87486355	688
ENSMUSG00000112433	lincRNA	Gm30122	ENSMUST00000218886	lincRNA		10	-1	78256111	639
ENSMUSG00000038330	protein_coding	C87499	ENSMUST00000053304	protein_coding	principal2	4	-1	88634259	1901
ENSMUSG00000112433	lincRNA	Gm30122	ENSMUST00000218662	lincRNA		10	-1	78264139	1556
ENSMUSG00000112433	lincRNA	Gm30122	ENSMUST00000218143	lincRNA		10	-1	78264139	1443
ENSMUSG00000082645	processed_pseudogene	Gm15481	ENSMUST00000120264	processed_pseudogene		5	1	122253002	539
ENSMUSG00000025613	protein_coding	Cct8	ENSMUST00000176589	retained_intron		16	-1	87486497	690
ENSMUSG00000112300	TEC	Gm47976	ENSMUST00000218207	TEC		10	-1	78266075	1545
ENSMUSG00000025613	protein_coding	Cct8	ENSMUST00000177301	processed_transcript		16	-1	87491448	465
ENSMUSG00000025777	protein_coding	Gdap1	ENSMUST00000150457	retained_intron		1	1	17145404	2162
ENSMUSG00000038330	protein_coding	C87499	ENSMUST00000134155	protein_coding		4	-1	88634411	893
ENSMUSG00000097981	processed_pseudogene	Gm7583	ENSMUST00000182941	processed_pseudogene		7	-1	67783781	1005
ENSMUSG00000038330	protein_coding	C87499	ENSMUST00000156062	protein_coding		4	-1	88634142	602
ENSMUSG00000025777	protein_coding	Gdap1	ENSMUST00000189736	nonsense_mediated_decay		1	1	17145468	1058
ENSMUSG00000037973	protein_coding	Itprid1	ENSMUST00000169699	processed_transcript		6	1	55886825	3064
ENSMUSG00000025777	protein_coding	Gdap1	ENSMUST00000189465	retained_intron		1	1	17158370	3680
ENSMUSG00000038330	protein_coding	C87499	ENSMUST00000107142	protein_coding	alternative2	4	-1	88634191	672
ENSMUSG00000015247	protein_coding	Nipsnap3b	ENSMUST00000015391	protein_coding	principal1	4	1	53011880	1552
ENSMUSG00000024515	protein_coding	Smad4	ENSMUST00000025393	protein_coding	principal1	18	-1	73703780	3384
ENSMUSG00000097697	lincRNA	4833412C05Rik	ENSMUST00000181235	lincRNA		7	-1	67803496	1083
ENSMUSG00000028226	protein_coding	Mmp16	ENSMUST00000183662	nonsense_mediated_decay		4	1	17852893	3470
ENSMUSG00000107646	processed_pseudogene	Gm44225	ENSMUST00000203582	processed_pseudogene		6	-1	73885849	186
ENSMUSG00000024515	protein_coding	Smad4	ENSMUST00000114939	protein_coding	principal1	18	-1	73678231	2233
ENSMUSG00000097697	lincRNA	4833412C05Rik	ENSMUST00000208257	lincRNA		7	-1	67804139	850
ENSMUSG00000025613	protein_coding	Cct8	ENSMUST00000176041	protein_coding		16	-1	87495859	618
ENSMUSG00000028226	protein_coding	Mmp16	ENSMUST00000142434	protein_coding		4	1	17853091	853
ENSMUSG00000015247	protein_coding	Nipsnap3b	ENSMUST00000107665	protein_coding		4	1	53011950	848
ENSMUSG00000015247	protein_coding	Nipsnap3b	ENSMUST00000132678	processed_transcript		4	1	53020976	444
ENSMUSG00000047443	protein_coding	Erfe	ENSMUST00000086861	protein_coding	principal1	1	1	91366430	2815
ENSMUSG00000024515	protein_coding	Smad4	ENSMUST00000131339	processed_transcript		18	-1	73642563	487
ENSMUSG00000079502	protein_coding	Cfap77	ENSMUST00000189027	nonsense_mediated_decay		2	-1	29055024	1841
ENSMUSG00000025613	protein_coding	Cct8	ENSMUST00000176750	protein_coding		16	-1	87495704	625
ENSMUSG00000102716	lincRNA	Gm5099	ENSMUST00000194892	lincRNA		1	1	38132083	1848
ENSMUSG00000024515	protein_coding	Smad4	ENSMUST00000147315	processed_transcript		18	-1	73649819	569
ENSMUSG00000047443	protein_coding	Erfe	ENSMUST00000190998	protein_coding		1	1	91370694	715
ENSMUSG00000109464	lincRNA	Gm34350	ENSMUST00000208898	lincRNA		7	1	67819250	481
ENSMUSG00000109193	lincRNA	Gm39027	ENSMUST00000208560	lincRNA		7	-1	67849632	2942
ENSMUSG00000109152	processed_pseudogene	Gm44666	ENSMUST00000208544	processed_pseudogene		7	-1	67886585	391
ENSMUSG00000024515	protein_coding	Smad4	ENSMUST00000142672	processed_transcript		18	-1	73662775	917
ENSMUSG00000024515	protein_coding	Smad4	ENSMUST00000129326	processed_transcript		18	-1	73675118	430
ENSMUSG00000025519	protein_coding	Tktl2	ENSMUST00000002025	protein_coding	principal1	8	1	66511756	2021
ENSMUSG00000028804	protein_coding	Csmd2	ENSMUST00000184063	protein_coding	principal1	4	1	127988044	13555
ENSMUSG00000113918	antisense	Gm6566	ENSMUST00000221468	antisense		12	-1	87155486	1171
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000097808	protein_coding		1	-1	22805724	2411
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000239255	protein_coding		1	-1	22512529	516
ENSMUSG00000025519	protein_coding	Tktl2	ENSMUST00000183187	protein_coding	principal1	8	1	66511759	5485
ENSMUSG00000099951	processed_pseudogene	Gm9226	ENSMUST00000188352	processed_pseudogene		7	-1	39277409	3489
ENSMUSG00000100112	unprocessed_pseudogene	Gm29258	ENSMUST00000186842	unprocessed_pseudogene		7	-1	39312129	2564
ENSMUSG00000085082	processed_pseudogene	Gm16330	ENSMUST00000128324	processed_pseudogene		8	-1	66589008	297
ENSMUSG00000100721	unprocessed_pseudogene	Gm9271	ENSMUST00000185988	unprocessed_pseudogene		7	-1	39366398	2580
ENSMUSG00000105947	TEC	Gm43789	ENSMUST00000199275	TEC		5	-1	102986313	2472
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000191012	protein_coding		1	1	10038006	345
ENSMUSG00000053742	protein_coding	Gm5114	ENSMUST00000108017	protein_coding	principal1	7	-1	39413160	3047
ENSMUSG00000028804	protein_coding	Csmd2	ENSMUST00000148247	processed_transcript		4	1	128477154	3320
ENSMUSG00000105253	processed_pseudogene	Gm42522	ENSMUST00000196071	processed_pseudogene		5	-1	102952072	255
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000081544	protein_coding	alternative2	1	-1	22805724	5954
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000115273	protein_coding	alternative2	1	-1	22805724	6107
ENSMUSG00000028804	protein_coding	Csmd2	ENSMUST00000139561	processed_transcript		4	1	128547936	686
ENSMUSG00000028804	protein_coding	Csmd2	ENSMUST00000221199	protein_coding		4	1	128552575	3601
ENSMUSG00000079502	protein_coding	Cfap77	ENSMUST00000189711	protein_coding	alternative2	2	-1	29055039	1759
ENSMUSG00000028226	protein_coding	Mmp16	ENSMUST00000029881	protein_coding	principal1	4	1	17853458	5011
ENSMUSG00000079502	protein_coding	Cfap77	ENSMUST00000190049	processed_transcript		2	-1	29039360	774
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000218140	protein_coding		1	-1	22805994	1434
ENSMUSG00000087459	antisense	Csmd2os	ENSMUST00000153357	antisense		4	-1	128164259	615
ENSMUSG00000044014	protein_coding	Npy5r	ENSMUST00000070810	protein_coding	principal1	8	-1	66688094	2314
ENSMUSG00000087459	antisense	Csmd2os	ENSMUST00000179945	antisense		4	-1	128166967	643
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000097811	protein_coding	principal5	1	-1	22805724	6446
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000097810	protein_coding	alternative2	1	-1	22805724	6362
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000097809	protein_coding	alternative2	1	-1	22805724	6179
ENSMUSG00000044014	protein_coding	Npy5r	ENSMUST00000212563	protein_coding	principal1	8	-1	66688047	1747
ENSMUSG00000029033	protein_coding	Acap3	ENSMUST00000079031	protein_coding		4	1	155891875	4301
ENSMUSG00000085717	antisense	Hmgb4os	ENSMUST00000131581	antisense		4	1	128261044	518
ENSMUSG00000028226	protein_coding	Mmp16	ENSMUST00000133416	retained_intron		4	1	17853593	3797
ENSMUSG00000079502	protein_coding	Cfap77	ENSMUST00000157048	protein_coding	principal2	2	-1	29055066	1042
ENSMUSG00000028226	protein_coding	Mmp16	ENSMUST00000149353	protein_coding		4	1	17933991	601
ENSMUSG00000044014	protein_coding	Npy5r	ENSMUST00000211920	protein_coding	principal1	8	-1	66688128	1715
ENSMUSG00000028226	protein_coding	Mmp16	ENSMUST00000139418	retained_intron		4	1	18051757	729
ENSMUSG00000041670	protein_coding	Rims1	ENSMUST00000164877	protein_coding		1	-1	22315805	2294
ENSMUSG00000083387	processed_pseudogene	Gm11860	ENSMUST00000122346	processed_pseudogene		4	-1	18010227	1010
ENSMUSG00000099652	processed_pseudogene	Gm28833	ENSMUST00000189671	processed_pseudogene		Y	1	41835327	559
ENSMUSG00000079502	protein_coding	Cfap77	ENSMUST00000113843	processed_transcript		2	-1	29055059	610
ENSMUSG00000048686	protein_coding	Hmgb4	ENSMUST00000053830	protein_coding	principal1	4	-1	128260957	746
ENSMUSG00000083773	processed_pseudogene	Gm13394	ENSMUST00000121658	processed_pseudogene		2	-1	28934609	1000
ENSMUSG00000108949	lincRNA	Gm45069	ENSMUST00000208604	lincRNA		7	-1	6283610	317
ENSMUSG00000064156	protein_coding	Prol1	ENSMUST00000170832	protein_coding	principal1	5	1	88317312	1163
ENSMUSG00000064267	protein_coding	Hvcn1	ENSMUST00000145854	protein_coding		5	1	122206804	657
ENSMUSG00000084177	processed_pseudogene	Gm13508	ENSMUST00000121639	processed_pseudogene		2	-1	49328151	775
ENSMUSG00000105334	TEC	Gm42680	ENSMUST00000196238	TEC		5	-1	13135958	2500
ENSMUSG00000002930	protein_coding	Ppp1r17	ENSMUST00000052827	protein_coding	principal1	6	1	56017497	1757
ENSMUSG00000105041	TEC	Gm42676	ENSMUST00000197609	TEC		5	1	13525723	2686
ENSMUSG00000110010	TEC	Gm45629	ENSMUST00000209629	TEC		7	-1	46685383	2546
ENSMUSG00000104626	TEC	Gm42675	ENSMUST00000197552	TEC		5	1	13548694	4035
ENSMUSG00000029033	protein_coding	Acap3	ENSMUST00000126582	processed_transcript		4	1	155891902	1049
ENSMUSG00000105750	TEC	Gm43130	ENSMUST00000197721	TEC		5	1	13481028	3907
ENSMUSG00000029033	protein_coding	Acap3	ENSMUST00000131168	processed_transcript		4	1	155892272	736
ENSMUSG00000112132	lincRNA	Gm36229	ENSMUST00000218737	lincRNA		10	1	53409882	1855
ENSMUSG00000019831	protein_coding	Wasf1	ENSMUST00000019975	protein_coding	principal1	10	1	40883475	2609
ENSMUSG00000056219	processed_pseudogene	Tmem229b-ps	ENSMUST00000168554	processed_pseudogene		10	1	53474964	506
ENSMUSG00000019831	protein_coding	Wasf1	ENSMUST00000105509	protein_coding	principal1	10	1	40883827	2719
ENSMUSG00000028883	protein_coding	Sema3a	ENSMUST00000196514	processed_transcript		5	1	13125414	1954
ENSMUSG00000112739	lincRNA	Gm20597	ENSMUST00000218774	lincRNA		10	-1	53518989	5486
ENSMUSG00000024304	protein_coding	Cdh2	ENSMUST00000025166	protein_coding	principal1	18	-1	16809246	4843
ENSMUSG00000112733	lincRNA	Gm40650	ENSMUST00000218925	lincRNA		10	1	53488222	1505
ENSMUSG00000028883	protein_coding	Sema3a	ENSMUST00000197582	retained_intron		5	1	13125492	2593
ENSMUSG00000112733	lincRNA	Gm40650	ENSMUST00000218707	lincRNA		10	1	53510548	1285
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000155564	protein_coding		8	1	25513654	453
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000187049	nonsense_mediated_decay		1	-1	91398700	2683
ENSMUSG00000112440	processed_pseudogene	Gm47722	ENSMUST00000220223	processed_pseudogene		10	-1	53530185	529
ENSMUSG00000024304	protein_coding	Cdh2	ENSMUST00000152779	retained_intron		18	-1	16808462	3351
ENSMUSG00000028416	protein_coding	Bag1	ENSMUST00000030125	protein_coding	alternative2	4	-1	40948243	1295
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000042125	protein_coding	principal1	1	1	74661745	10019
ENSMUSG00000024304	protein_coding	Cdh2	ENSMUST00000115850	protein_coding		18	-1	16670069	3785
ENSMUSG00000051156	protein_coding	Olfr1491	ENSMUST00000214007	protein_coding	principal1	19	1	13697268	1675
ENSMUSG00000036819	protein_coding	Jmjd4	ENSMUST00000108777	protein_coding	principal1	11	1	59450045	4351
ENSMUSG00000051156	protein_coding	Olfr1491	ENSMUST00000216377	protein_coding	principal1	19	1	13697268	1678
ENSMUSG00000030911	protein_coding	Zp2	ENSMUST00000208874	protein_coding	alternative2	7	-1	120145289	2233
ENSMUSG00000036819	protein_coding	Jmjd4	ENSMUST00000045279	protein_coding		11	1	59450045	4315
ENSMUSG00000051156	protein_coding	Olfr1491	ENSMUST00000216622	protein_coding	principal1	19	1	13697272	1725
ENSMUSG00000029033	protein_coding	Acap3	ENSMUST00000137726	processed_transcript		4	1	155892312	4101
ENSMUSG00000051156	protein_coding	Olfr1491	ENSMUST00000215493	protein_coding	principal1	19	1	13697268	1675
ENSMUSG00000028883	protein_coding	Sema3a	ENSMUST00000195907	retained_intron		5	1	13125593	2624
ENSMUSG00000029282	protein_coding	Amtn	ENSMUST00000073363	protein_coding	principal1	5	1	88376108	1022
ENSMUSG00000085707	antisense	Gm12212	ENSMUST00000141032	antisense		11	-1	53463613	378
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000141119	protein_coding		1	1	74661750	664
ENSMUSG00000051156	protein_coding	Olfr1491	ENSMUST00000216366	protein_coding	principal1	19	1	13697268	1726
ENSMUSG00000029033	protein_coding	Acap3	ENSMUST00000140902	retained_intron		4	1	155901668	739
ENSMUSG00000051156	protein_coding	Olfr1491	ENSMUST00000052737	protein_coding	principal1	19	1	13704829	960
ENSMUSG00000106633	processed_pseudogene	Gm43431	ENSMUST00000198577	processed_pseudogene		5	1	88423215	340
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000153636	retained_intron		1	1	74661817	485
ENSMUSG00000021033	protein_coding	Gstz1	ENSMUST00000222885	protein_coding		12	1	87147165	1571
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000129890	protein_coding		1	1	74661817	493
ENSMUSG00000109527	unprocessed_pseudogene	Olfr1492-ps1	ENSMUST00000207071	unprocessed_pseudogene		19	1	13718013	865
ENSMUSG00000029033	protein_coding	Acap3	ENSMUST00000145654	retained_intron		4	1	155902659	928
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000113678	protein_coding		1	1	74678898	3762
ENSMUSG00000030911	protein_coding	Zp2	ENSMUST00000033207	protein_coding	principal2	7	-1	120145290	2221
ENSMUSG00000029033	protein_coding	Acap3	ENSMUST00000131372	processed_transcript		4	1	155903321	729
ENSMUSG00000101468	processed_pseudogene	Gm7761	ENSMUST00000190510	processed_pseudogene		1	-1	22987125	921
ENSMUSG00000036819	protein_coding	Jmjd4	ENSMUST00000147163	nonsense_mediated_decay		11	1	59450045	4359
ENSMUSG00000105013	processed_pseudogene	Gm7721	ENSMUST00000200446	processed_pseudogene		5	1	88427813	546
ENSMUSG00000029033	protein_coding	Acap3	ENSMUST00000140855	processed_transcript		4	1	155905359	465
ENSMUSG00000028416	protein_coding	Bag1	ENSMUST00000108089	protein_coding	principal2	4	-1	40948281	1336
ENSMUSG00000006471	protein_coding	Ndor1	ENSMUST00000100329	protein_coding		2	-1	25255383	4517
ENSMUSG00000036819	protein_coding	Jmjd4	ENSMUST00000126158	retained_intron		11	1	59450121	4542
ENSMUSG00000030911	protein_coding	Zp2	ENSMUST00000207726	nonsense_mediated_decay		7	-1	120145291	2393
ENSMUSG00000101227	sense_overlapping	Gm29506	ENSMUST00000191045	sense_overlapping		1	-1	23235673	2078
ENSMUSG00000073730	protein_coding	Ppp1r14bl	ENSMUST00000073179	protein_coding	principal1	1	-1	23102253	1781
ENSMUSG00000028416	protein_coding	Bag1	ENSMUST00000191273	protein_coding	principal2	4	-1	40948294	1348
ENSMUSG00000029033	protein_coding	Acap3	ENSMUST00000105584	protein_coding	principal1	4	1	155891822	4365
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000143925	processed_transcript		1	1	74685326	812
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000140591	processed_transcript		1	1	74685956	491
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000155753	retained_intron		1	1	74689423	754
ENSMUSG00000111091	lincRNA	Gm48651	ENSMUST00000213510	lincRNA		10	1	20756117	470
ENSMUSG00000102766	TEC	Gm6420	ENSMUST00000193885	TEC		1	-1	23256407	723
ENSMUSG00000102766	TEC	Gm6420	ENSMUST00000195365	TEC		1	-1	23256406	420
ENSMUSG00000097881	lincRNA	Celrr	ENSMUST00000181433	lincRNA		1	1	121087405	1561
ENSMUSG00000097881	lincRNA	Celrr	ENSMUST00000190612	lincRNA		1	1	121087471	642
ENSMUSG00000030911	protein_coding	Zp2	ENSMUST00000208122	retained_intron		7	-1	120145183	914
ENSMUSG00000097881	lincRNA	Celrr	ENSMUST00000185678	lincRNA		1	1	121087474	937
ENSMUSG00000097970	lincRNA	Gm27028	ENSMUST00000182303	lincRNA		1	1	23291537	399
ENSMUSG00000030911	protein_coding	Zp2	ENSMUST00000207333	processed_transcript		7	-1	120142937	349
ENSMUSG00000113642	transcribed_unprocessed_pseudogene	Gm49329	ENSMUST00000221149	processed_transcript		12	1	17900734	550
ENSMUSG00000097881	lincRNA	Celrr	ENSMUST00000181183	lincRNA		1	1	121087529	1194
ENSMUSG00000100775	lincRNA	Gm29107	ENSMUST00000190910	lincRNA		1	1	23293729	347
ENSMUSG00000094873	processed_pseudogene	Gm13812	ENSMUST00000118061	processed_pseudogene		2	-1	100461534	1347
ENSMUSG00000101700	lincRNA	Gm29359	ENSMUST00000191007	lincRNA		1	1	121224276	495
ENSMUSG00000104332	TEC	Gm38283	ENSMUST00000193041	TEC		1	-1	121300831	695
ENSMUSG00000098057	processed_pseudogene	Gm6283	ENSMUST00000182369	processed_pseudogene		10	1	127313149	1000
ENSMUSG00000113642	transcribed_unprocessed_pseudogene	Gm49329	ENSMUST00000223186	transcribed_unprocessed_pseudogene		12	1	18061967	544
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000145266	nonsense_mediated_decay		13	-1	100492338	1630
ENSMUSG00000113642	transcribed_unprocessed_pseudogene	Gm49329	ENSMUST00000222523	processed_transcript		12	1	18062091	1295
ENSMUSG00000113234	unprocessed_pseudogene	Gm49330	ENSMUST00000223267	unprocessed_pseudogene		12	1	17993133	126
ENSMUSG00000116663	processed_pseudogene	Gm49671	ENSMUST00000232134	processed_pseudogene		16	1	74606262	300
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000231227	processed_transcript		13	-1	100463610	380
ENSMUSG00000067356	TEC	B430203G13Rik	ENSMUST00000169657	TEC		12	1	17924294	1375
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000232450	protein_coding		13	-1	100477195	518
ENSMUSG00000113197	processed_pseudogene	Gm48318	ENSMUST00000222183	processed_pseudogene		12	-1	18018640	148
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000145132	processed_transcript		1	1	74690073	5078
ENSMUSG00000114025	unprocessed_pseudogene	Gm49331	ENSMUST00000221489	unprocessed_pseudogene		12	1	17902389	1214
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000232447	retained_intron		13	-1	100462157	442
ENSMUSG00000113416	unprocessed_pseudogene	Gm49328	ENSMUST00000221205	unprocessed_pseudogene		12	1	18024067	1815
ENSMUSG00000075467	protein_coding	Dnlz	ENSMUST00000125848	processed_transcript		2	-1	26352100	2766
ENSMUSG00000113536	transcribed_unprocessed_pseudogene	Gm49327	ENSMUST00000221539	processed_transcript		12	1	17933164	1538
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000128891	retained_intron		1	1	74695213	3389
ENSMUSG00000033257	protein_coding	Ttll4	ENSMUST00000143790	processed_transcript		1	1	74695734	760
ENSMUSG00000113536	transcribed_unprocessed_pseudogene	Gm49327	ENSMUST00000221109	transcribed_unprocessed_pseudogene		12	1	17933418	540
ENSMUSG00000113536	transcribed_unprocessed_pseudogene	Gm49327	ENSMUST00000221062	processed_transcript		12	1	17934691	1403
ENSMUSG00000114040	unprocessed_pseudogene	Gm48319	ENSMUST00000223372	unprocessed_pseudogene		12	1	18013612	103
ENSMUSG00000113556	unprocessed_pseudogene	Gm48317	ENSMUST00000222478	unprocessed_pseudogene		12	1	17985000	98
ENSMUSG00000021033	protein_coding	Gstz1	ENSMUST00000063117	protein_coding	principal2	12	1	87147718	1656
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000066984	protein_coding	principal1	13	-1	100492561	1656
ENSMUSG00000111177	processed_pseudogene	Rps2-ps3	ENSMUST00000213102	processed_pseudogene		10	-1	20878973	832
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000190747	protein_coding		1	-1	91384626	626
ENSMUSG00000021033	protein_coding	Gstz1	ENSMUST00000220574	protein_coding		12	1	87147772	971
ENSMUSG00000021033	protein_coding	Gstz1	ENSMUST00000220468	retained_intron		12	1	87153884	3035
ENSMUSG00000073947	protein_coding	Olfr615	ENSMUST00000214345	protein_coding	principal1	7	1	103556079	3403
ENSMUSG00000021033	protein_coding	Gstz1	ENSMUST00000222222	protein_coding	alternative1	12	1	87157608	724
ENSMUSG00000073947	protein_coding	Olfr615	ENSMUST00000215673	protein_coding	principal1	7	1	103556079	3469
ENSMUSG00000028264	protein_coding	Spaca1	ENSMUST00000029927	protein_coding	principal3	4	-1	34050191	1197
ENSMUSG00000073947	protein_coding	Olfr615	ENSMUST00000098198	protein_coding	principal1	7	1	103560479	942
ENSMUSG00000064267	protein_coding	Hvcn1	ENSMUST00000072602	protein_coding	principal1	5	1	122209729	2790
ENSMUSG00000034317	protein_coding	Trim59	ENSMUST00000107802	protein_coding	principal1	3	-1	69044755	2939
ENSMUSG00000028264	protein_coding	Spaca1	ENSMUST00000084734	protein_coding	alternative2	4	-1	34050039	1149
ENSMUSG00000047544	protein_coding	Olfr616	ENSMUST00000217293	protein_coding	principal1	7	-1	103569143	1627
ENSMUSG00000028264	protein_coding	Spaca1	ENSMUST00000108148	protein_coding	alternative2	4	-1	34041040	833
ENSMUSG00000047544	protein_coding	Olfr616	ENSMUST00000214806	protein_coding	principal1	7	-1	103568631	1641
ENSMUSG00000064267	protein_coding	Hvcn1	ENSMUST00000143560	protein_coding		5	1	122209909	1010
ENSMUSG00000006471	protein_coding	Ndor1	ENSMUST00000114349	protein_coding	principal1	2	-1	25255409	2336
ENSMUSG00000034317	protein_coding	Trim59	ENSMUST00000136512	protein_coding		3	-1	69044715	1553
ENSMUSG00000047544	protein_coding	Olfr616	ENSMUST00000106886	protein_coding	principal1	7	-1	103565277	954
ENSMUSG00000064267	protein_coding	Hvcn1	ENSMUST00000196187	protein_coding		5	1	122210113	427
ENSMUSG00000087602	lincRNA	Gm12753	ENSMUST00000152086	lincRNA		4	1	34130854	653
ENSMUSG00000034317	protein_coding	Trim59	ENSMUST00000142560	retained_intron		3	-1	69044715	384
ENSMUSG00000064267	protein_coding	Hvcn1	ENSMUST00000100747	protein_coding	principal1	5	1	122210134	2805
ENSMUSG00000062554	processed_pseudogene	Gm12751	ENSMUST00000122336	processed_pseudogene		4	1	34354043	381
ENSMUSG00000078624	protein_coding	Olfr613	ENSMUST00000214173	protein_coding	principal1	7	1	103548074	3840
ENSMUSG00000034317	protein_coding	Trim59	ENSMUST00000153259	processed_transcript		3	-1	69044723	372
ENSMUSG00000009894	protein_coding	Snap47	ENSMUST00000010038	protein_coding	principal2	11	-1	59449999	1896
ENSMUSG00000006471	protein_coding	Ndor1	ENSMUST00000148589	nonsense_mediated_decay		2	-1	25255386	2362
ENSMUSG00000081384	processed_pseudogene	Gm12752	ENSMUST00000121657	processed_pseudogene		4	-1	34380981	811
ENSMUSG00000086095	lincRNA	Gm15328	ENSMUST00000209584	lincRNA		18	1	16815721	1957
ENSMUSG00000086095	lincRNA	Gm15328	ENSMUST00000210330	lincRNA		18	1	16815731	1518
ENSMUSG00000086095	lincRNA	Gm15328	ENSMUST00000210201	lincRNA		18	1	16816202	1519
ENSMUSG00000086095	lincRNA	Gm15328	ENSMUST00000211529	lincRNA		18	1	16816332	1751
ENSMUSG00000006471	protein_coding	Ndor1	ENSMUST00000129705	retained_intron		2	-1	25248471	713
ENSMUSG00000075467	protein_coding	Dnlz	ENSMUST00000028295	protein_coding	principal1	2	-1	26352110	2916
ENSMUSG00000009894	protein_coding	Snap47	ENSMUST00000120940	protein_coding	alternative2	11	-1	59450007	1192
ENSMUSG00000006471	protein_coding	Ndor1	ENSMUST00000141808	protein_coding		2	-1	25255346	673
ENSMUSG00000009894	protein_coding	Snap47	ENSMUST00000156146	protein_coding		11	-1	59449999	795
ENSMUSG00000086095	lincRNA	Gm15328	ENSMUST00000144006	lincRNA		18	1	16816407	2977
ENSMUSG00000078624	protein_coding	Olfr613	ENSMUST00000106888	protein_coding	principal1	7	1	103550368	5139
ENSMUSG00000082649	processed_pseudogene	Gm12754	ENSMUST00000121908	processed_pseudogene		4	-1	34389847	454
ENSMUSG00000006471	protein_coding	Ndor1	ENSMUST00000123472	retained_intron		2	-1	25250342	494
ENSMUSG00000006471	protein_coding	Ndor1	ENSMUST00000147866	protein_coding		2	-1	25255416	702
ENSMUSG00000009894	protein_coding	Snap47	ENSMUST00000136436	protein_coding		11	-1	59449913	704
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000027534	protein_coding	principal1	1	-1	91398783	1368
ENSMUSG00000091404	processed_pseudogene	Gm3140	ENSMUST00000163523	processed_pseudogene		14	-1	5179029	481
ENSMUSG00000006471	protein_coding	Ndor1	ENSMUST00000132591	processed_transcript		2	-1	25255368	725
ENSMUSG00000009894	protein_coding	Snap47	ENSMUST00000132969	protein_coding		11	-1	59449999	615
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000026710	protein_coding	principal1	16	1	87454703	3205
ENSMUSG00000009894	protein_coding	Snap47	ENSMUST00000145550	protein_coding		11	-1	59447491	502
ENSMUSG00000006471	protein_coding	Ndor1	ENSMUST00000137355	retained_intron		2	-1	25255261	454
ENSMUSG00000079380	protein_coding	Gm8271	ENSMUST00000171053	protein_coding	principal1	14	1	5185793	1469
ENSMUSG00000009894	protein_coding	Snap47	ENSMUST00000150297	protein_coding		11	-1	59449916	353
ENSMUSG00000006471	protein_coding	Ndor1	ENSMUST00000132128	nonsense_mediated_decay		2	-1	25256022	738
ENSMUSG00000097218	processed_transcript	Gm26552	ENSMUST00000181033	processed_transcript		14	-1	5221712	676
ENSMUSG00000028419	protein_coding	Chmp5	ENSMUST00000030128	protein_coding	principal1	4	1	40948407	1519
ENSMUSG00000009894	protein_coding	Snap47	ENSMUST00000125846	protein_coding		11	-1	59451186	375
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000119504	protein_coding		16	1	87454979	2562
ENSMUSG00000099792	protein_coding	Gm29564	ENSMUST00000185575	protein_coding	principal1	Y	1	78212993	923
ENSMUSG00000097218	processed_transcript	Gm26552	ENSMUST00000180399	processed_transcript		14	-1	5221692	677
ENSMUSG00000107467	processed_pseudogene	Gm8992	ENSMUST00000204463	processed_pseudogene		6	-1	75188168	502
ENSMUSG00000097218	processed_transcript	Gm26552	ENSMUST00000180980	processed_transcript		14	-1	5221692	2079
ENSMUSG00000099497	unprocessed_pseudogene	Gm29147	ENSMUST00000186846	unprocessed_pseudogene		Y	-1	78323880	315
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000187105	retained_intron		1	-1	91398755	2342
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000142182	retained_intron		13	-1	100492367	1796
ENSMUSG00000029288	protein_coding	Ambn	ENSMUST00000198265	protein_coding	alternative2	5	1	88455991	1570
ENSMUSG00000097957	processed_pseudogene	Gm8993	ENSMUST00000182182	processed_pseudogene		6	1	75201988	983
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000131356	protein_coding		16	1	87454985	354
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000187231	protein_coding		1	-1	91384573	780
ENSMUSG00000097218	processed_transcript	Gm26552	ENSMUST00000181649	processed_transcript		14	-1	5221699	1294
ENSMUSG00000084119	processed_pseudogene	Gm12351	ENSMUST00000118727	processed_pseudogene		4	1	34457890	292
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000185886	retained_intron		1	-1	91378917	606
ENSMUSG00000090900	processed_pseudogene	Gm3326	ENSMUST00000164656	processed_pseudogene		14	-1	5215126	1043
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000134842	nonsense_mediated_decay		13	-1	100492579	1252
ENSMUSG00000099479	lincRNA	Gm29146	ENSMUST00000188904	lincRNA		Y	-1	78328635	2165
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000187306	protein_coding		1	-1	91398793	377
ENSMUSG00000107951	processed_pseudogene	Gm6210	ENSMUST00000204734	processed_pseudogene		6	-1	75298059	1942
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000124698	retained_intron		13	-1	100480731	365
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000187678	nonsense_mediated_decay		1	-1	91398801	491
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000124644	retained_intron		13	-1	100481649	698
ENSMUSG00000100849	lincRNA	Gm28663	ENSMUST00000186567	lincRNA		Y	1	78360628	1498
ENSMUSG00000018387	protein_coding	Shroom1	ENSMUST00000109013	protein_coding	principal3	11	1	53457205	3312
ENSMUSG00000095912	protein_coding	Gm3317	ENSMUST00000179659	protein_coding	principal1	14	1	5164535	519
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000066940	retained_intron		13	-1	100492579	1065
ENSMUSG00000100849	lincRNA	Gm28663	ENSMUST00000189180	lincRNA		Y	1	78361081	437
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000147229	retained_intron		13	-1	100492374	1572
ENSMUSG00000029206	protein_coding	Nsun7	ENSMUST00000202994	protein_coding		5	1	66259897	3632
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000191230	processed_transcript		1	-1	91398815	1131
ENSMUSG00000029288	protein_coding	Ambn	ENSMUST00000031226	protein_coding	principal3	5	1	88456011	1854
ENSMUSG00000021639	protein_coding	Gtf2h2	ENSMUST00000152049	retained_intron		13	-1	100492553	450
ENSMUSG00000101115	lincRNA	Gm28664	ENSMUST00000186118	lincRNA		Y	-1	78367279	457
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000186986	nonsense_mediated_decay		1	-1	91398785	636
ENSMUSG00000018387	protein_coding	Shroom1	ENSMUST00000018531	protein_coding	alternative2	11	1	53457230	2630
ENSMUSG00000032773	protein_coding	Chrm1	ENSMUST00000177197	protein_coding		19	1	8663789	1054
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000186433	retained_intron		1	-1	91388804	679
ENSMUSG00000073946	protein_coding	Olfr617	ENSMUST00000216516	protein_coding	principal1	7	1	103573061	3083
ENSMUSG00000073946	protein_coding	Olfr617	ENSMUST00000215755	protein_coding	principal1	7	1	103573201	3000
ENSMUSG00000018387	protein_coding	Shroom1	ENSMUST00000146001	retained_intron		11	1	53457246	4548
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000190519	protein_coding		1	-1	91398778	483
ENSMUSG00000101226	processed_pseudogene	Gm20954	ENSMUST00000189078	processed_pseudogene		1	-1	23346599	644
ENSMUSG00000026309	protein_coding	Ilkap	ENSMUST00000189651	retained_intron		1	-1	91398794	640
ENSMUSG00000073946	protein_coding	Olfr617	ENSMUST00000048265	protein_coding	principal1	7	1	103584024	957
ENSMUSG00000018387	protein_coding	Shroom1	ENSMUST00000109010	retained_intron		11	1	53457249	2893
ENSMUSG00000018387	protein_coding	Shroom1	ENSMUST00000093114	protein_coding		11	1	53457279	2886
ENSMUSG00000032773	protein_coding	Chrm1	ENSMUST00000035444	protein_coding	principal1	19	1	8664005	4159
ENSMUSG00000018387	protein_coding	Shroom1	ENSMUST00000155297	processed_transcript		11	1	53465496	267
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000114017	protein_coding		1	1	66175313	4981
ENSMUSG00000073945	protein_coding	Olfr618	ENSMUST00000214883	protein_coding	principal1	7	1	103590103	3304
ENSMUSG00000071392	protein_coding	Ect2l	ENSMUST00000215232	processed_transcript		10	-1	18139114	682
ENSMUSG00000032773	protein_coding	Chrm1	ENSMUST00000163785	protein_coding	principal1	19	1	8664005	6271
ENSMUSG00000073945	protein_coding	Olfr618	ENSMUST00000098197	protein_coding	principal1	7	1	103597318	957
ENSMUSG00000094929	protein_coding	Gm3526	ENSMUST00000164544	protein_coding	principal1	14	-1	5260580	1750
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000144886	retained_intron		16	1	87455027	3002
ENSMUSG00000109874	TEC	Gm9911	ENSMUST00000211467	TEC		8	-1	29087486	2802
ENSMUSG00000073944	protein_coding	Olfr619	ENSMUST00000215732	protein_coding	principal1	7	1	103600575	1370
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000131206	retained_intron		16	1	87455043	1405
ENSMUSG00000028958	protein_coding	Tmub1	ENSMUST00000030799	protein_coding	principal1	5	-1	24447854	1333
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000177538	processed_transcript		16	1	87455049	354
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000183144	lincRNA		12	1	109729764	3797
ENSMUSG00000073944	protein_coding	Olfr619	ENSMUST00000098196	protein_coding	principal1	7	1	103603589	1124
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000160260	protein_coding	alternative2	1	-1	166002678	13022
ENSMUSG00000029206	protein_coding	Nsun7	ENSMUST00000201100	protein_coding	principal3	5	1	66259912	2775
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000182074	lincRNA		12	1	109729765	850
ENSMUSG00000071392	protein_coding	Ect2l	ENSMUST00000207827	protein_coding	alternative2	10	-1	18201353	2730
ENSMUSG00000029286	protein_coding	Enam	ENSMUST00000199104	protein_coding	alternative2	5	1	88487975	4171
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000114015	protein_coding		1	1	66175316	5440
ENSMUSG00000071392	protein_coding	Ect2l	ENSMUST00000209178	protein_coding		10	-1	18201353	2586
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000144759	nonsense_mediated_decay		16	1	87455058	2561
ENSMUSG00000028958	protein_coding	Tmub1	ENSMUST00000115036	protein_coding		5	-1	24447317	1455
ENSMUSG00000071392	protein_coding	Ect2l	ENSMUST00000208948	protein_coding	alternative2	10	-1	18201353	2862
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000159212	protein_coding		1	-1	165913283	1745
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000135399	retained_intron		16	1	87472854	3582
ENSMUSG00000028958	protein_coding	Tmub1	ENSMUST00000115033	protein_coding	principal1	5	-1	24447625	1598
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000124873	processed_transcript		1	1	66175471	378
ENSMUSG00000029206	protein_coding	Nsun7	ENSMUST00000200891	retained_intron		5	1	66260018	2289
ENSMUSG00000028958	protein_coding	Tmub1	ENSMUST00000238335	protein_coding		5	-1	24446952	1232
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000125844	processed_transcript		1	1	66175550	419
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000146386	retained_intron		16	1	87473089	502
ENSMUSG00000071392	protein_coding	Ect2l	ENSMUST00000216336	processed_transcript		10	-1	18147279	565
ENSMUSG00000028958	protein_coding	Tmub1	ENSMUST00000127194	protein_coding		5	-1	24447587	775
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000149656	retained_intron		16	1	87481438	594
ENSMUSG00000029286	protein_coding	Enam	ENSMUST00000031222	protein_coding	principal2	5	1	88487982	5483
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000182185	lincRNA		12	1	109730276	3822
ENSMUSG00000029206	protein_coding	Nsun7	ENSMUST00000031109	protein_coding	alternative2	5	1	66260312	2345
ENSMUSG00000025616	protein_coding	Usp16	ENSMUST00000177275	retained_intron		16	1	87482851	358
ENSMUSG00000071392	protein_coding	Ect2l	ENSMUST00000207148	processed_transcript		10	-1	18210890	943
ENSMUSG00000028958	protein_coding	Tmub1	ENSMUST00000123167	protein_coding		5	-1	24447791	445
ENSMUSG00000071392	protein_coding	Ect2l	ENSMUST00000095817	protein_coding	principal2	10	-1	18210890	2900
ENSMUSG00000113048	unprocessed_pseudogene	Gm48347	ENSMUST00000221945	unprocessed_pseudogene		12	1	18123716	125
ENSMUSG00000046372	transcribed_processed_pseudogene	Gm5590	ENSMUST00000059110	transcribed_processed_pseudogene		7	-1	39446174	345
ENSMUSG00000046372	transcribed_processed_pseudogene	Gm5590	ENSMUST00000186976	processed_transcript		7	-1	39449221	2315
ENSMUSG00000001604	protein_coding	Tcea3	ENSMUST00000136812	processed_transcript		4	1	136247729	896
ENSMUSG00000105858	lincRNA	2310074N15Rik	ENSMUST00000198276	lincRNA		5	1	24447908	582
ENSMUSG00000113666	lincRNA	Gm35725	ENSMUST00000221862	lincRNA		12	-1	13627646	2800
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000182499	lincRNA		12	1	109730959	3187
ENSMUSG00000113199	unprocessed_pseudogene	Gm9229	ENSMUST00000222777	unprocessed_pseudogene		12	1	18136186	126
ENSMUSG00000082608	processed_pseudogene	Gm7670	ENSMUST00000121272	processed_pseudogene		18	-1	16839957	641
ENSMUSG00000113155	processed_pseudogene	Gm48354	ENSMUST00000221588	processed_pseudogene		12	-1	18144082	148
ENSMUSG00000095588	processed_pseudogene	Gm12350	ENSMUST00000121208	processed_pseudogene		4	1	34485832	462
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000182268	lincRNA		12	1	109734981	591
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000181543	lincRNA		12	1	109734981	1300
ENSMUSG00000005078	protein_coding	Jkamp	ENSMUST00000117449	protein_coding	alternative1	12	1	72085857	1874
ENSMUSG00000113283	lincRNA	Gm35890	ENSMUST00000221195	lincRNA		12	1	13668853	564
ENSMUSG00000104190	TEC	Gm10472	ENSMUST00000193014	TEC		5	-1	24451709	2102
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000183116	lincRNA		12	1	109734985	898
ENSMUSG00000104190	TEC	Gm10472	ENSMUST00000195796	TEC		5	-1	24451707	534
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000182231	lincRNA		12	1	109737702	360
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000181496	lincRNA		12	1	109737780	1906
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000183068	lincRNA		12	1	109743801	634
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000183084	lincRNA		12	1	109747903	1553
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000111429	protein_coding	alternative2	1	-1	166002609	2679
ENSMUSG00000097391	lincRNA	Mirg	ENSMUST00000182300	lincRNA		12	1	109747964	694
ENSMUSG00000005078	protein_coding	Jkamp	ENSMUST00000057257	protein_coding	principal3	12	1	72085857	1292
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000184643	protein_coding	alternative2	1	-1	166002618	2201
ENSMUSG00000005078	protein_coding	Jkamp	ENSMUST00000125764	protein_coding		12	1	72085589	721
ENSMUSG00000026158	protein_coding	Ogfrl1	ENSMUST00000027343	protein_coding	principal1	1	-1	23383175	4844
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000160908	protein_coding	alternative2	1	-1	166002622	2591
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000073889	protein_coding	principal1	7	-1	79466362	7837
ENSMUSG00000005078	protein_coding	Jkamp	ENSMUST00000132371	processed_transcript		12	1	72085789	383
ENSMUSG00000005078	protein_coding	Jkamp	ENSMUST00000134041	retained_intron		12	1	72089164	787
ENSMUSG00000104866	antisense	Gm42948	ENSMUST00000199085	antisense		5	-1	23223796	578
ENSMUSG00000005078	protein_coding	Jkamp	ENSMUST00000152381	retained_intron		12	1	72089705	669
ENSMUSG00000070777	protein_coding	Ceacam20	ENSMUST00000094753	protein_coding	principal1	7	1	19965412	2888
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000111426	protein_coding	alternative2	1	-1	165934948	2671
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000201662	protein_coding		7	-1	79451634	408
ENSMUSG00000081855	processed_pseudogene	Rpl17-ps5	ENSMUST00000121001	processed_pseudogene		5	-1	22613182	555
ENSMUSG00000060879	processed_pseudogene	Gm6564	ENSMUST00000075377	processed_pseudogene		5	-1	22932013	619
ENSMUSG00000026158	protein_coding	Ogfrl1	ENSMUST00000186064	retained_intron		1	-1	23380801	2926
ENSMUSG00000005078	protein_coding	Jkamp	ENSMUST00000145752	retained_intron		12	1	72099791	581
ENSMUSG00000113976	processed_pseudogene	Gm18243	ENSMUST00000220756	processed_pseudogene		12	-1	72121795	887
ENSMUSG00000094832	TEC	Gm21846	ENSMUST00000179257	TEC		5	1	22775630	3073
ENSMUSG00000070777	protein_coding	Ceacam20	ENSMUST00000207248	protein_coding		7	1	19976283	640
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000139290	protein_coding		7	-1	79450617	375
ENSMUSG00000106181	processed_pseudogene	Gm9523	ENSMUST00000199146	processed_pseudogene		5	-1	22694719	1159
ENSMUSG00000026158	protein_coding	Ogfrl1	ENSMUST00000188677	protein_coding		1	-1	23397541	808
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000194366	protein_coding		1	-1	165880160	223
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000184799	protein_coding		1	-1	165880160	592
ENSMUSG00000026158	protein_coding	Ogfrl1	ENSMUST00000189537	processed_transcript		1	-1	23397772	1522
ENSMUSG00000106379	protein_coding	Lhfpl3	ENSMUST00000197992	protein_coding	principal1	5	1	22746059	3115
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000176004	retained_intron		1	-1	165892119	1210
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000027850	protein_coding	alternative2	1	-1	166002629	2258
ENSMUSG00000106379	protein_coding	Lhfpl3	ENSMUST00000196406	protein_coding		5	1	23100552	2589
ENSMUSG00000105156	processed_pseudogene	Gm9057	ENSMUST00000198791	processed_pseudogene		5	1	22563957	296
ENSMUSG00000104913	processed_pseudogene	Gm6560	ENSMUST00000198588	processed_pseudogene		5	-1	22726168	1591
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000069609	protein_coding	principal3	1	-1	165934900	2402
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000121416	protein_coding	alternative2	5	1	149184350	3792
ENSMUSG00000105543	TEC	Gm43169	ENSMUST00000199544	TEC		5	-1	22868545	4734
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000114013	protein_coding	principal2	1	1	66321719	6258
ENSMUSG00000097207	lincRNA	6030443J06Rik	ENSMUST00000195898	lincRNA		5	1	22550432	786
ENSMUSG00000021086	protein_coding	Ccdc175	ENSMUST00000021494	protein_coding	principal1	12	-1	72185029	2622
ENSMUSG00000097207	lincRNA	6030443J06Rik	ENSMUST00000181764	lincRNA		5	1	22550437	4299
ENSMUSG00000038593	protein_coding	Tctn1	ENSMUST00000111738	protein_coding	principal1	5	-1	122264460	5717
ENSMUSG00000097207	lincRNA	6030443J06Rik	ENSMUST00000181374	lincRNA		5	1	22550437	1353
ENSMUSG00000097207	lincRNA	6030443J06Rik	ENSMUST00000181209	lincRNA		5	1	22550444	2380
ENSMUSG00000107918	processed_pseudogene	Gm8999	ENSMUST00000204951	processed_pseudogene		6	-1	75384022	969
ENSMUSG00000097207	lincRNA	6030443J06Rik	ENSMUST00000199660	lincRNA		5	1	22553915	3449
ENSMUSG00000107830	TEC	4933439N06Rik	ENSMUST00000203062	TEC		6	-1	75573458	1365
ENSMUSG00000105076	lincRNA	A930003O13Rik	ENSMUST00000199056	lincRNA		5	-1	22746887	1955
ENSMUSG00000038593	protein_coding	Tctn1	ENSMUST00000141281	nonsense_mediated_decay		5	-1	122264460	2201
ENSMUSG00000080824	processed_pseudogene	Gm9001	ENSMUST00000121642	processed_pseudogene		6	-1	75782756	399
ENSMUSG00000105076	lincRNA	A930003O13Rik	ENSMUST00000197486	lincRNA		5	-1	22742465	3098
ENSMUSG00000105076	lincRNA	A930003O13Rik	ENSMUST00000196218	lincRNA		5	-1	22746907	2889
ENSMUSG00000097973	processed_pseudogene	Gm4929	ENSMUST00000182021	processed_pseudogene		12	-1	13753665	992
ENSMUSG00000063376	protein_coding	Ifna13	ENSMUST00000105149	protein_coding	principal1	4	-1	88644459	819
ENSMUSG00000045193	protein_coding	Cirbp	ENSMUST00000154726	protein_coding		10	1	80165985	423
ENSMUSG00000017390	protein_coding	Aldoc	ENSMUST00000017534	protein_coding	principal1	11	1	78322968	2786
ENSMUSG00000038593	protein_coding	Tctn1	ENSMUST00000176677	processed_transcript		5	-1	122251678	529
ENSMUSG00000107880	lincRNA	Gm44113	ENSMUST00000203510	lincRNA		6	-1	75974983	3041
ENSMUSG00000017390	protein_coding	Aldoc	ENSMUST00000148689	retained_intron		11	1	78323168	601
ENSMUSG00000038593	protein_coding	Tctn1	ENSMUST00000137118	retained_intron		5	-1	122254566	758
ENSMUSG00000087170	lincRNA	1700001G01Rik	ENSMUST00000147119	lincRNA		18	1	17019051	630
ENSMUSG00000097145	processed_transcript	9230114K14Rik	ENSMUST00000199547	lincRNA		5	1	52190672	437
ENSMUSG00000087170	lincRNA	1700001G01Rik	ENSMUST00000153022	lincRNA		18	1	17019076	928
ENSMUSG00000028883	protein_coding	Sema3a	ENSMUST00000095012	protein_coding	principal1	5	1	13396784	4085
ENSMUSG00000087170	lincRNA	1700001G01Rik	ENSMUST00000125117	lincRNA		18	1	17035508	1562
ENSMUSG00000035958	protein_coding	Tdp2	ENSMUST00000038039	protein_coding	principal1	13	1	24831679	1957
ENSMUSG00000087170	lincRNA	1700001G01Rik	ENSMUST00000136956	lincRNA		18	1	17125787	430
ENSMUSG00000101194	unprocessed_pseudogene	Gm29149	ENSMUST00000191590	unprocessed_pseudogene		Y	-1	78471953	696
ENSMUSG00000017390	protein_coding	Aldoc	ENSMUST00000102478	protein_coding	principal1	11	1	78324200	1700
ENSMUSG00000028883	protein_coding	Sema3a	ENSMUST00000125629	protein_coding		5	1	13398688	400
ENSMUSG00000028883	protein_coding	Sema3a	ENSMUST00000137798	protein_coding		5	1	13398997	2285
ENSMUSG00000113397	processed_pseudogene	Gm9194	ENSMUST00000220749	processed_pseudogene		12	-1	13791710	1447
ENSMUSG00000035958	protein_coding	Tdp2	ENSMUST00000226055	processed_transcript		13	1	24831681	510
ENSMUSG00000113855	processed_pseudogene	Gm49374	ENSMUST00000220877	processed_pseudogene		12	-1	13792337	827
ENSMUSG00000001604	protein_coding	Tcea3	ENSMUST00000102533	protein_coding	principal1	4	1	136247952	1251
ENSMUSG00000038593	protein_coding	Tctn1	ENSMUST00000177148	retained_intron		5	-1	122264415	2790
ENSMUSG00000071072	protein_coding	Ptges3	ENSMUST00000052798	protein_coding	principal1	10	1	128058954	2000
ENSMUSG00000113863	processed_pseudogene	Gm7126	ENSMUST00000221883	processed_pseudogene		12	-1	13790252	1696
ENSMUSG00000097145	processed_transcript	9230114K14Rik	ENSMUST00000180601	retained_intron		5	1	52190679	2120
ENSMUSG00000099742	processed_pseudogene	Gm29148	ENSMUST00000188140	processed_pseudogene		Y	-1	78546241	336
ENSMUSG00000035958	protein_coding	Tdp2	ENSMUST00000223804	protein_coding		13	1	24831692	1136
ENSMUSG00000075175	protein_coding	Olfr1086	ENSMUST00000213198	protein_coding	principal1	2	-1	86680092	1153
ENSMUSG00000017390	protein_coding	Aldoc	ENSMUST00000128032	processed_transcript		11	1	78324326	788
ENSMUSG00000071072	protein_coding	Ptges3	ENSMUST00000084771	protein_coding		10	1	128059011	1559
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000128673	retained_intron		1	1	66321836	3537
ENSMUSG00000100999	unprocessed_pseudogene	Gm29145	ENSMUST00000189914	unprocessed_pseudogene		Y	-1	78573856	456
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000176942	retained_intron		1	-1	165935011	2206
ENSMUSG00000017390	protein_coding	Aldoc	ENSMUST00000124090	processed_transcript		11	1	78325065	378
ENSMUSG00000075175	protein_coding	Olfr1086	ENSMUST00000099878	protein_coding	principal1	2	-1	86677331	933
ENSMUSG00000071072	protein_coding	Ptges3	ENSMUST00000148943	retained_intron		10	1	128069272	420
ENSMUSG00000001604	protein_coding	Tcea3	ENSMUST00000143942	protein_coding		4	1	136247973	626
ENSMUSG00000028883	protein_coding	Sema3a	ENSMUST00000030714	protein_coding	principal1	5	1	13399309	5930
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000137807	retained_intron		1	1	66321998	1091
ENSMUSG00000097145	processed_transcript	9230114K14Rik	ENSMUST00000199805	lincRNA		5	1	52190679	695
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000154403	retained_intron		7	-1	79455080	2167
ENSMUSG00000017390	protein_coding	Aldoc	ENSMUST00000156039	processed_transcript		11	1	78325329	706
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000082225	retained_intron		1	-1	165934939	1859
ENSMUSG00000114026	lincRNA	Gm48480	ENSMUST00000221186	lincRNA		12	1	14030352	288
ENSMUSG00000091995	unprocessed_pseudogene	Gm3339	ENSMUST00000163462	unprocessed_pseudogene		14	-1	5280522	475
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000177472	retained_intron		1	-1	166002615	2335
ENSMUSG00000097145	processed_transcript	9230114K14Rik	ENSMUST00000198720	lincRNA		5	1	52190713	837
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000123647	protein_coding		1	1	66322102	753
ENSMUSG00000113522	lincRNA	Gm48479	ENSMUST00000222663	lincRNA		12	1	14013084	236
ENSMUSG00000028883	protein_coding	Sema3a	ENSMUST00000141968	protein_coding		5	1	13399324	312
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000239213	protein_coding	alternative2	1	1	66362196	6259
ENSMUSG00000035958	protein_coding	Tdp2	ENSMUST00000225138	nonsense_mediated_decay		13	1	24831696	1421
ENSMUSG00000115640	lincRNA	Gm49247	ENSMUST00000228313	lincRNA		15	-1	8481945	203
ENSMUSG00000101562	unprocessed_pseudogene	Gm29144	ENSMUST00000189235	unprocessed_pseudogene		Y	-1	78609734	339
ENSMUSG00000028883	protein_coding	Sema3a	ENSMUST00000200073	processed_transcript		5	1	13399577	2593
ENSMUSG00000083650	processed_pseudogene	Gm13357	ENSMUST00000120528	processed_pseudogene		2	-1	23019667	537
ENSMUSG00000114438	antisense	Gm47827	ENSMUST00000224584	antisense		13	-1	112685696	414
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000077355	protein_coding		1	1	66364655	5125
ENSMUSG00000045132	protein_coding	Olfr620	ENSMUST00000217603	nonsense_mediated_decay		7	-1	103612534	5559
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000177358	protein_coding		1	-1	166002613	626
ENSMUSG00000045132	protein_coding	Olfr620	ENSMUST00000215752	processed_transcript		7	-1	103612519	2751
ENSMUSG00000035958	protein_coding	Tdp2	ENSMUST00000130788	processed_transcript		13	1	24831822	543
ENSMUSG00000047789	protein_coding	Slc38a9	ENSMUST00000225367	retained_intron		13	1	112660751	1178
ENSMUSG00000106464	lincRNA	C130083M11Rik	ENSMUST00000197171	lincRNA		5	-1	52216434	2072
ENSMUSG00000100328	lincRNA	Gm28816	ENSMUST00000189686	lincRNA		Y	1	78651259	1498
ENSMUSG00000081861	processed_pseudogene	Gm14441	ENSMUST00000121960	processed_pseudogene		2	-1	22913832	540
ENSMUSG00000100737	unprocessed_pseudogene	Gm21774	ENSMUST00000191592	unprocessed_pseudogene		Y	-1	42080426	696
ENSMUSG00000105328	TEC	Gm43180	ENSMUST00000197541	TEC		5	1	52239336	2886
ENSMUSG00000035958	protein_coding	Tdp2	ENSMUST00000225490	processed_transcript		13	1	24831944	1771
ENSMUSG00000100328	lincRNA	Gm28816	ENSMUST00000189295	lincRNA		Y	1	78651713	440
ENSMUSG00000030341	protein_coding	Tnfrsf1a	ENSMUST00000131434	processed_transcript		6	1	125349362	250
ENSMUSG00000099780	lincRNA	Gm29537	ENSMUST00000186153	lincRNA		Y	1	42141555	1498
ENSMUSG00000035958	protein_coding	Tdp2	ENSMUST00000224542	processed_transcript		13	1	24836404	625
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000114012	protein_coding		1	1	66364658	5119
ENSMUSG00000101321	lincRNA	Gm28817	ENSMUST00000187598	lincRNA		Y	-1	78657490	830
ENSMUSG00000081784	unprocessed_pseudogene	Gm13281	ENSMUST00000120871	unprocessed_pseudogene		4	-1	88649304	567
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000176101	retained_intron		1	-1	166002629	2139
ENSMUSG00000045132	protein_coding	Olfr620	ENSMUST00000052152	protein_coding	principal1	7	-1	103612534	3157
ENSMUSG00000099780	lincRNA	Gm29537	ENSMUST00000185274	lincRNA		Y	1	42142008	437
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000173855	protein_coding		1	1	66380512	1695
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000176800	protein_coding		1	-1	166002609	254
ENSMUSG00000026565	protein_coding	Pou2f1	ENSMUST00000111427	protein_coding	alternative2	1	-1	165934948	13050
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000141148	protein_coding		1	1	66380702	785
ENSMUSG00000101007	TEC	Gm29541	ENSMUST00000191351	TEC		12	-1	31500745	678
ENSMUSG00000020181	protein_coding	Nav3	ENSMUST00000032719	protein_coding	principal2	10	-1	110000219	9962
ENSMUSG00000034126	protein_coding	Pomt2	ENSMUST00000037788	protein_coding	principal1	12	-1	87147902	5064
ENSMUSG00000078355	protein_coding	Ifna16	ENSMUST00000105148	protein_coding	principal1	4	-1	88676924	1010
ENSMUSG00000030341	protein_coding	Tnfrsf1a	ENSMUST00000130257	protein_coding		6	1	125349451	390
ENSMUSG00000099008	processed_pseudogene	Gm17976	ENSMUST00000184037	processed_pseudogene		1	1	165941618	1909
ENSMUSG00000102363	TEC	Gm32999	ENSMUST00000192693	TEC		1	-1	165844608	562
ENSMUSG00000096023	protein_coding	Gm3542	ENSMUST00000169362	protein_coding	principal1	14	-1	5334928	2063
ENSMUSG00000078354	protein_coding	Ifna2	ENSMUST00000105147	protein_coding	principal1	4	-1	88683912	1032
ENSMUSG00000115591	lincRNA	Gm31282	ENSMUST00000227472	lincRNA		15	1	8482119	866
ENSMUSG00000020181	protein_coding	Nav3	ENSMUST00000239301	protein_coding	alternative2	10	-1	110456204	10740
ENSMUSG00000034126	protein_coding	Pomt2	ENSMUST00000222634	nonsense_mediated_decay		12	-1	87147474	2774
ENSMUSG00000091713	processed_pseudogene	Gm17126	ENSMUST00000172276	processed_pseudogene		14	1	5357260	523
ENSMUSG00000103768	TEC	Gm37856	ENSMUST00000191634	TEC		1	-1	165846085	999
ENSMUSG00000107685	processed_pseudogene	Gm5995	ENSMUST00000204107	processed_pseudogene		6	1	76121627	1273
ENSMUSG00000034126	protein_coding	Pomt2	ENSMUST00000221252	retained_intron		12	-1	87124862	754
ENSMUSG00000089829	processed_transcript	Gm16565	ENSMUST00000159138	sense_overlapping		1	1	165781075	2181
ENSMUSG00000089829	processed_transcript	Gm16565	ENSMUST00000193086	processed_transcript		1	1	165781199	403
ENSMUSG00000097792	lincRNA	Gm27042	ENSMUST00000181109	lincRNA		19	1	40589435	1098
ENSMUSG00000100079	protein_coding	Ifnab	ENSMUST00000071378	protein_coding	principal1	4	-1	88691359	1058
ENSMUSG00000074731	protein_coding	Zfp345	ENSMUST00000109914	protein_coding	principal1	2	-1	150485091	2734
ENSMUSG00000034126	protein_coding	Pomt2	ENSMUST00000222147	retained_intron		12	-1	87147968	3855
ENSMUSG00000080873	processed_pseudogene	Rpl30-ps3	ENSMUST00000117928	processed_pseudogene		2	-1	90747963	348
ENSMUSG00000081893	unprocessed_pseudogene	Gm13273	ENSMUST00000119737	unprocessed_pseudogene		4	-1	88696698	159
ENSMUSG00000107770	processed_pseudogene	Gm44126	ENSMUST00000204831	processed_pseudogene		6	1	76284416	514
ENSMUSG00000095774	protein_coding	Olfr970	ENSMUST00000215922	protein_coding	principal1	9	1	39808860	1739
ENSMUSG00000084192	unprocessed_pseudogene	Gm13282	ENSMUST00000121577	unprocessed_pseudogene		4	-1	88708453	545
ENSMUSG00000095774	protein_coding	Olfr970	ENSMUST00000213975	protein_coding	principal1	9	1	39810984	1630
ENSMUSG00000107612	processed_pseudogene	Gm44163	ENSMUST00000205140	processed_pseudogene		6	-1	76455865	475
ENSMUSG00000045193	protein_coding	Cirbp	ENSMUST00000105365	protein_coding	principal1	10	1	80167778	1321
ENSMUSG00000095774	protein_coding	Olfr970	ENSMUST00000071132	protein_coding	principal1	9	1	39819641	936
ENSMUSG00000083325	transcribed_processed_pseudogene	Gm14121	ENSMUST00000121441	transcribed_processed_pseudogene		2	-1	150500845	1380
ENSMUSG00000072476	protein_coding	Gm9008	ENSMUST00000097218	protein_coding	principal1	6	-1	76497784	2353
ENSMUSG00000025372	protein_coding	Baiap2	ENSMUST00000026436	protein_coding	principal4	11	1	119942763	2394
ENSMUSG00000097700	antisense	Gm26738	ENSMUST00000181312	antisense		6	-1	17835185	601
ENSMUSG00000045193	protein_coding	Cirbp	ENSMUST00000054666	nonsense_mediated_decay		10	1	80167840	834
ENSMUSG00000098082	unitary_pseudogene	Gm20574	ENSMUST00000182867	unitary_pseudogene		17	1	40854036	917
ENSMUSG00000107651	antisense	Gm44166	ENSMUST00000204070	antisense		6	1	76496082	515
ENSMUSG00000081077	processed_pseudogene	Gm13899	ENSMUST00000121519	processed_pseudogene		6	-1	17712941	1255
ENSMUSG00000045193	protein_coding	Cirbp	ENSMUST00000139935	retained_intron		10	1	80167863	376
ENSMUSG00000081092	processed_pseudogene	Gm14128	ENSMUST00000119514	processed_pseudogene		2	1	150521093	1011
ENSMUSG00000104751	lincRNA	Gm43179	ENSMUST00000198797	lincRNA		5	-1	52342360	275
ENSMUSG00000106858	TEC	Gm43844	ENSMUST00000202926	TEC		6	1	17914996	5605
ENSMUSG00000111541	processed_pseudogene	Gm47219	ENSMUST00000215265	processed_pseudogene		9	1	39821705	99
ENSMUSG00000106822	TEC	Gm43533	ENSMUST00000202933	TEC		6	1	17717578	2936
ENSMUSG00000106801	TEC	Gm42852	ENSMUST00000202649	TEC		6	-1	17748900	1379
ENSMUSG00000020181	protein_coding	Nav3	ENSMUST00000161582	processed_transcript		10	-1	109823585	6371
ENSMUSG00000093934	protein_coding	Olfr971	ENSMUST00000214242	protein_coding	principal1	9	1	39836876	2027
ENSMUSG00000020181	protein_coding	Nav3	ENSMUST00000238286	protein_coding		10	-1	109833221	7316
ENSMUSG00000045193	protein_coding	Cirbp	ENSMUST00000140774	retained_intron		10	1	80167886	912
ENSMUSG00000025372	protein_coding	Baiap2	ENSMUST00000106231	protein_coding		11	1	119942763	4005
ENSMUSG00000093934	protein_coding	Olfr971	ENSMUST00000075467	protein_coding	principal1	9	1	39839436	924
ENSMUSG00000045193	protein_coding	Cirbp	ENSMUST00000151321	retained_intron		10	1	80170227	894
ENSMUSG00000020181	protein_coding	Nav3	ENSMUST00000161223	processed_transcript		10	-1	109723801	660
ENSMUSG00000020181	protein_coding	Nav3	ENSMUST00000163071	processed_transcript		10	-1	109764840	491
ENSMUSG00000117268	unprocessed_pseudogene	Gm49884	ENSMUST00000233825	unprocessed_pseudogene		4	1	88754471	208
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000151423	processed_transcript		1	1	66386945	2215
ENSMUSG00000045193	protein_coding	Cirbp	ENSMUST00000147190	retained_intron		10	1	80171982	593
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000145419	protein_coding		1	1	66386978	2195
ENSMUSG00000014353	protein_coding	Tmem87b	ENSMUST00000110325	protein_coding	principal2	2	1	128818118	4807
ENSMUSG00000020181	protein_coding	Nav3	ENSMUST00000161798	retained_intron		10	-1	109904023	490
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000129105	retained_intron		6	1	17692933	2381
ENSMUSG00000070923	protein_coding	Klhl9	ENSMUST00000094993	protein_coding	principal1	4	-1	88722465	4174
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000127388	processed_transcript		1	1	66386985	2338
ENSMUSG00000030341	protein_coding	Tnfrsf1a	ENSMUST00000032491	protein_coding	principal1	6	1	125349723	2156
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000127082	retained_intron		7	-1	79466187	4589
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000174590	retained_intron		1	1	66387011	304
ENSMUSG00000054951	protein_coding	9130008F23Rik	ENSMUST00000233871	nonsense_mediated_decay		17	-1	40880558	2159
ENSMUSG00000094618	protein_coding	Gm13271	ENSMUST00000094992	protein_coding	principal1	4	1	88754868	549
ENSMUSG00000020181	protein_coding	Nav3	ENSMUST00000160159	retained_intron		10	-1	110456204	5151
ENSMUSG00000014353	protein_coding	Tmem87b	ENSMUST00000143398	protein_coding	alternative2	2	1	128818303	2100
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000133522	processed_transcript		1	1	66415261	849
ENSMUSG00000102410	TEC	Gm36935	ENSMUST00000192526	TEC		10	-1	110037779	292
ENSMUSG00000112595	processed_pseudogene	Gm47340	ENSMUST00000218767	processed_pseudogene		10	-1	110140169	431
ENSMUSG00000054951	protein_coding	9130008F23Rik	ENSMUST00000233122	protein_coding	principal1	17	-1	40880559	781
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000172886	protein_coding		1	1	66416111	1009
ENSMUSG00000112197	TEC	Gm47337	ENSMUST00000220224	TEC		10	1	110078691	2277
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000173778	protein_coding		1	1	66416111	1144
ENSMUSG00000112548	TEC	Gm47338	ENSMUST00000219876	TEC		10	1	110379508	2154
ENSMUSG00000086074	antisense	Gm13274	ENSMUST00000233397	antisense		4	-1	88744350	1301
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000149444	nonsense_mediated_decay		7	-1	79466180	4247
ENSMUSG00000054951	protein_coding	9130008F23Rik	ENSMUST00000068258	protein_coding	principal1	17	-1	40880558	2159
ENSMUSG00000030341	protein_coding	Tnfrsf1a	ENSMUST00000125880	nonsense_mediated_decay		6	1	125357371	621
ENSMUSG00000112556	TEC	Gm47339	ENSMUST00000218053	TEC		10	1	110099819	3086
ENSMUSG00000086074	antisense	Gm13274	ENSMUST00000233708	antisense		4	-1	88757579	2897
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000173800	protein_coding		1	1	66416791	722
ENSMUSG00000030341	protein_coding	Tnfrsf1a	ENSMUST00000144524	protein_coding		6	1	125357765	885
ENSMUSG00000086074	antisense	Gm13274	ENSMUST00000123455	antisense		4	-1	88744294	266
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000172486	protein_coding		1	1	66433575	696
ENSMUSG00000086074	antisense	Gm13274	ENSMUST00000137624	antisense		4	-1	88744293	271
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000132048	nonsense_mediated_decay		7	-1	79466198	4546
ENSMUSG00000014353	protein_coding	Tmem87b	ENSMUST00000152210	protein_coding		2	1	128818384	2096
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000024639	protein_coding		1	1	66251662	5195
ENSMUSG00000030341	protein_coding	Tnfrsf1a	ENSMUST00000134803	retained_intron		6	1	125360427	764
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000145154	retained_intron		7	-1	79452080	910
ENSMUSG00000006763	protein_coding	Saal1	ENSMUST00000143082	protein_coding	principal1	7	-1	46710680	4728
ENSMUSG00000014353	protein_coding	Tmem87b	ENSMUST00000126160	retained_intron		2	1	128841153	3607
ENSMUSG00000025372	protein_coding	Baiap2	ENSMUST00000075180	protein_coding	alternative1	11	1	119942763	3518
ENSMUSG00000015222	protein_coding	Map2	ENSMUST00000114018	protein_coding		1	1	66251647	5303
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000201907	protein_coding		7	-1	79451922	149
ENSMUSG00000014353	protein_coding	Tmem87b	ENSMUST00000143686	processed_transcript		2	1	128849960	503
ENSMUSG00000073656	antisense	Gm10558	ENSMUST00000147494	antisense		1	-1	66328796	1661
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000201030	protein_coding		7	-1	79453786	465
ENSMUSG00000025372	protein_coding	Baiap2	ENSMUST00000103021	protein_coding		11	1	119942763	3398
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000139795	retained_intron		7	-1	79454340	849
ENSMUSG00000108823	processed_pseudogene	Gm18959	ENSMUST00000208954	processed_pseudogene		7	1	99945062	655
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000139597	retained_intron		7	-1	79456065	919
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000127734	retained_intron		7	-1	79455394	765
ENSMUSG00000072941	protein_coding	Sod3	ENSMUST00000101208	protein_coding	principal1	5	1	52363791	3738
ENSMUSG00000047789	protein_coding	Slc38a9	ENSMUST00000052514	protein_coding	principal1	13	1	112660766	8910
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000139668	protein_coding		7	-1	79459441	708
ENSMUSG00000025372	protein_coding	Baiap2	ENSMUST00000106233	protein_coding	alternative1	11	1	119942763	2442
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000143672	protein_coding		7	-1	79459796	728
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000142915	processed_transcript		7	-1	79461804	724
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000201557	retained_intron		7	-1	79466194	2279
ENSMUSG00000047789	protein_coding	Slc38a9	ENSMUST00000223839	retained_intron		13	1	112660768	980
ENSMUSG00000103238	TEC	Gm36527	ENSMUST00000195500	TEC		1	-1	151499585	3029
ENSMUSG00000039176	protein_coding	Polg	ENSMUST00000125562	protein_coding		7	-1	79466070	645
ENSMUSG00000040212	protein_coding	Emp3	ENSMUST00000038876	protein_coding	principal1	7	-1	45921404	736
ENSMUSG00000025372	protein_coding	Baiap2	ENSMUST00000146566	processed_transcript		11	1	119943472	433
ENSMUSG00000089762	protein_coding	Ier5l	ENSMUST00000065134	protein_coding	principal1	2	-1	30474219	2683
ENSMUSG00000025372	protein_coding	Baiap2	ENSMUST00000146960	processed_transcript		11	1	119960021	276
ENSMUSG00000082400	processed_pseudogene	Gm16017	ENSMUST00000119834	processed_pseudogene		7	-1	79412517	208
ENSMUSG00000058761	protein_coding	Rnf169	ENSMUST00000080817	protein_coding	principal1	7	-1	99980448	7147
ENSMUSG00000047789	protein_coding	Slc38a9	ENSMUST00000223581	nonsense_mediated_decay		13	1	112660777	681
ENSMUSG00000068129	protein_coding	Cst7	ENSMUST00000089200	protein_coding	principal1	2	1	150570415	986
ENSMUSG00000025372	protein_coding	Baiap2	ENSMUST00000152523	processed_transcript		11	1	119943116	585
ENSMUSG00000047789	protein_coding	Slc38a9	ENSMUST00000223674	processed_transcript		13	1	112660781	2063
ENSMUSG00000025372	protein_coding	Baiap2	ENSMUST00000131580	processed_transcript		11	1	119997671	360
ENSMUSG00000047789	protein_coding	Slc38a9	ENSMUST00000224703	retained_intron		13	1	112668371	1768
ENSMUSG00000058761	protein_coding	Rnf169	ENSMUST00000174264	processed_transcript		7	-1	99965734	717
ENSMUSG00000047789	protein_coding	Slc38a9	ENSMUST00000224252	retained_intron		13	1	112700229	2847
ENSMUSG00000040212	protein_coding	Emp3	ENSMUST00000164119	protein_coding	principal1	7	-1	45920851	784
ENSMUSG00000060715	protein_coding	1700019A02Rik	ENSMUST00000072235	protein_coding	principal2	1	-1	53187636	646
ENSMUSG00000047789	protein_coding	Slc38a9	ENSMUST00000225649	processed_transcript		13	1	112735610	1011
ENSMUSG00000114418	processed_pseudogene	Gm18883	ENSMUST00000224669	processed_pseudogene		13	1	112699679	358
ENSMUSG00000040212	protein_coding	Emp3	ENSMUST00000210297	protein_coding	principal1	7	-1	45921162	601
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000050472	protein_coding	principal4	5	1	149184560	3757
ENSMUSG00000060715	protein_coding	1700019A02Rik	ENSMUST00000190748	protein_coding	alternative2	1	-1	53187608	726
ENSMUSG00000094449	protein_coding	Olfr972	ENSMUST00000215303	protein_coding	principal1	9	1	39866422	1641
ENSMUSG00000075174	protein_coding	Olfr1087	ENSMUST00000214141	protein_coding	principal1	2	-1	86698395	3861
ENSMUSG00000103438	TEC	Gm36991	ENSMUST00000191800	TEC		13	1	94619280	648
ENSMUSG00000094449	protein_coding	Olfr972	ENSMUST00000216167	protein_coding	principal1	9	1	39866439	1522
ENSMUSG00000006763	protein_coding	Saal1	ENSMUST00000210791	retained_intron		7	-1	46708917	3386
ENSMUSG00000040212	protein_coding	Emp3	ENSMUST00000210939	protein_coding		7	-1	45921302	380
ENSMUSG00000075174	protein_coding	Olfr1087	ENSMUST00000099877	protein_coding	principal1	2	-1	86690973	942
ENSMUSG00000094449	protein_coding	Olfr972	ENSMUST00000079767	protein_coding	principal1	9	1	39873277	945
ENSMUSG00000113598	lincRNA	Gm48287	ENSMUST00000221068	lincRNA		13	-1	94647344	645
ENSMUSG00000112934	lincRNA	Gm32305	ENSMUST00000221742	lincRNA		13	-1	94700356	1899
ENSMUSG00000040212	protein_coding	Emp3	ENSMUST00000210937	retained_intron		7	-1	45920120	380
ENSMUSG00000105625	unprocessed_pseudogene	Gm31230	ENSMUST00000199725	unprocessed_pseudogene		5	-1	87100395	785
ENSMUSG00000090136	transcribed_processed_pseudogene	Gm10177	ENSMUST00000160052	processed_transcript		9	1	37252922	444
ENSMUSG00000090136	transcribed_processed_pseudogene	Gm10177	ENSMUST00000161698	transcribed_processed_pseudogene		9	1	37252975	207
ENSMUSG00000113904	lincRNA	Gm32351	ENSMUST00000220503	lincRNA		13	-1	94702718	438
ENSMUSG00000085130	antisense	Gm11417	ENSMUST00000150536	antisense		11	1	81072403	920
ENSMUSG00000113709	processed_pseudogene	Hmgb1-ps11	ENSMUST00000221749	processed_pseudogene		13	-1	65437144	621
ENSMUSG00000052373	protein_coding	Mpp3	ENSMUST00000100400	protein_coding	principal1	11	-1	102026094	2997
ENSMUSG00000106502	processed_pseudogene	Gm42795	ENSMUST00000198847	processed_pseudogene		5	-1	87114609	76
ENSMUSG00000113006	processed_pseudogene	Gm48316	ENSMUST00000221997	processed_pseudogene		13	1	94752270	293
ENSMUSG00000086971	antisense	4930527B05Rik	ENSMUST00000141593	antisense		11	1	81385013	602
ENSMUSG00000053286	protein_coding	Trmt1l	ENSMUST00000188179	retained_intron		1	1	151428542	1567
ENSMUSG00000113547	processed_pseudogene	Gm46389	ENSMUST00000223199	processed_pseudogene		13	-1	94754593	392
ENSMUSG00000114031	processed_pseudogene	Gm48136	ENSMUST00000221462	processed_pseudogene		13	-1	65479292	908
ENSMUSG00000038167	protein_coding	Plekhg6	ENSMUST00000042647	protein_coding	principal1	6	-1	125380793	3299
ENSMUSG00000082027	processed_pseudogene	Gm11416	ENSMUST00000119111	processed_pseudogene		11	1	81046794	863
ENSMUSG00000080980	processed_pseudogene	1700071K01Rik	ENSMUST00000117522	processed_pseudogene		11	-1	81573473	819
ENSMUSG00000106374	TEC	Gm27680	ENSMUST00000199221	TEC		5	-1	111330544	807
ENSMUSG00000006763	protein_coding	Saal1	ENSMUST00000209797	retained_intron		7	-1	46710641	1849
ENSMUSG00000091043	protein_coding	Glyatl3	ENSMUST00000166343	protein_coding	principal1	17	-1	40914350	996
ENSMUSG00000006763	protein_coding	Saal1	ENSMUST00000210628	retained_intron		7	-1	46710658	2228
ENSMUSG00000063626	protein_coding	Unc5d	ENSMUST00000168630	protein_coding	principal3	8	-1	29219636	9220
ENSMUSG00000006763	protein_coding	Saal1	ENSMUST00000209780	retained_intron		7	-1	46710661	3841
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000122160	protein_coding	principal4	5	1	149184663	3827
ENSMUSG00000095390	protein_coding	Olfr229	ENSMUST00000214904	protein_coding	principal1	9	1	39907336	3125
ENSMUSG00000020703	protein_coding	5530401A14Rik	ENSMUST00000021044	protein_coding	principal1	11	1	81860679	1836
ENSMUSG00000095390	protein_coding	Olfr229	ENSMUST00000076802	protein_coding	principal1	9	1	39909805	924
ENSMUSG00000063626	protein_coding	Unc5d	ENSMUST00000210785	protein_coding	alternative2	8	-1	29219569	3404
ENSMUSG00000111154	processed_pseudogene	Gm47229	ENSMUST00000214478	processed_pseudogene		9	-1	39918519	249
ENSMUSG00000020703	protein_coding	5530401A14Rik	ENSMUST00000126433	processed_transcript		11	1	81860673	3654
ENSMUSG00000008200	protein_coding	Fnbp4	ENSMUST00000238890	protein_coding	alternative2	2	1	90745370	4691
ENSMUSG00000087534	antisense	Gm11418	ENSMUST00000156193	antisense		11	1	81587361	626
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000218007	retained_intron		10	1	80855275	432
ENSMUSG00000063626	protein_coding	Unc5d	ENSMUST00000211448	protein_coding		8	-1	29219427	3087
ENSMUSG00000063626	protein_coding	Unc5d	ENSMUST00000210298	protein_coding		8	-1	29219427	3060
ENSMUSG00000063626	protein_coding	Unc5d	ENSMUST00000209401	protein_coding		8	-1	29219427	3081
ENSMUSG00000025757	protein_coding	Hspa4l	ENSMUST00000203353	protein_coding		3	1	40745382	1949
ENSMUSG00000110263	TEC	Gm45652	ENSMUST00000210926	TEC		8	-1	29091903	3831
ENSMUSG00000109648	TEC	Svet1	ENSMUST00000209370	TEC		8	-1	29112776	3940
ENSMUSG00000049427	TEC	Gm9837	ENSMUST00000057722	TEC		11	-1	53470479	731
ENSMUSG00000052373	protein_coding	Mpp3	ENSMUST00000132094	processed_transcript		11	-1	102026934	4121
ENSMUSG00000026185	protein_coding	Igfbp5	ENSMUST00000027377	protein_coding	principal1	1	-1	72874884	6006
ENSMUSG00000026185	protein_coding	Igfbp5	ENSMUST00000137339	processed_transcript		1	-1	72874275	4281
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000100410	protein_coding		5	1	149184666	3148
ENSMUSG00000110953	unprocessed_pseudogene	Olfr1088-ps1	ENSMUST00000213686	unprocessed_pseudogene		2	-1	86705748	863
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000132044	processed_transcript		6	1	105677660	393
ENSMUSG00000039187	protein_coding	Fanci	ENSMUST00000126456	protein_coding		7	1	79391929	575
ENSMUSG00000008200	protein_coding	Fnbp4	ENSMUST00000123314	processed_transcript		2	1	90745604	2442
ENSMUSG00000074030	protein_coding	Exoc8	ENSMUST00000098312	protein_coding	principal1	8	-1	124897705	4598
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000119685	protein_coding	alternative2	5	1	149184667	3604
ENSMUSG00000044287	protein_coding	Nrn1l	ENSMUST00000060167	protein_coding	principal3	8	1	105893567	617
ENSMUSG00000008200	protein_coding	Fnbp4	ENSMUST00000126829	processed_transcript		2	1	90752572	635
ENSMUSG00000052373	protein_coding	Mpp3	ENSMUST00000062801	protein_coding	principal1	11	-1	102026955	2848
ENSMUSG00000008200	protein_coding	Fnbp4	ENSMUST00000152794	processed_transcript		2	1	90757604	657
ENSMUSG00000111711	protein_coding	Olfr1089	ENSMUST00000214317	protein_coding	principal1	2	-1	86733701	1118
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000139474	protein_coding		5	1	149184678	691
ENSMUSG00000052373	protein_coding	Mpp3	ENSMUST00000107168	protein_coding	principal1	11	-1	102028461	3094
ENSMUSG00000110706	antisense	Gm45709	ENSMUST00000213052	antisense		8	-1	124900130	1075
ENSMUSG00000052373	protein_coding	Mpp3	ENSMUST00000127053	retained_intron		11	-1	102010410	813
ENSMUSG00000008200	protein_coding	Fnbp4	ENSMUST00000145747	processed_transcript		2	1	90758407	776
ENSMUSG00000052373	protein_coding	Mpp3	ENSMUST00000107167	protein_coding		11	-1	102026937	2066
ENSMUSG00000044287	protein_coding	Nrn1l	ENSMUST00000118920	protein_coding	alternative2	8	1	105893572	603
ENSMUSG00000008200	protein_coding	Fnbp4	ENSMUST00000142631	processed_transcript		2	1	90763471	538
ENSMUSG00000052373	protein_coding	Mpp3	ENSMUST00000147838	processed_transcript		11	-1	102026934	2834
ENSMUSG00000008200	protein_coding	Fnbp4	ENSMUST00000141672	processed_transcript		2	1	90768105	952
ENSMUSG00000035671	protein_coding	Zswim4	ENSMUST00000039480	protein_coding	principal1	8	-1	84237055	4625
ENSMUSG00000052373	protein_coding	Mpp3	ENSMUST00000155751	processed_transcript		11	-1	102025857	672
ENSMUSG00000052373	protein_coding	Mpp3	ENSMUST00000141403	processed_transcript		11	-1	102026755	455
ENSMUSG00000008200	protein_coding	Fnbp4	ENSMUST00000135592	processed_transcript		2	1	90768662	583
ENSMUSG00000008200	protein_coding	Fnbp4	ENSMUST00000123955	processed_transcript		2	1	90775543	715
ENSMUSG00000008200	protein_coding	Fnbp4	ENSMUST00000013759	protein_coding	principal2	2	1	90745370	4691
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000126168	nonsense_mediated_decay		5	1	149184678	3577
ENSMUSG00000116881	TEC	Gm49674	ENSMUST00000232678	TEC		16	-1	74875938	2900
ENSMUSG00000115577	processed_pseudogene	Gm49250	ENSMUST00000228699	processed_pseudogene		15	-1	8529591	157
ENSMUSG00000115480	lincRNA	Gm49249	ENSMUST00000227558	lincRNA		15	1	8512327	372
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000117878	protein_coding		5	1	149184716	2931
ENSMUSG00000115480	lincRNA	Gm49249	ENSMUST00000228875	lincRNA		15	1	8528951	1690
ENSMUSG00000095663	lincRNA	Gm2310	ENSMUST00000238514	lincRNA		15	-1	8520472	2413
ENSMUSG00000095663	lincRNA	Gm2310	ENSMUST00000179217	lincRNA		15	-1	8519953	1131
ENSMUSG00000031986	protein_coding	Sprtn	ENSMUST00000034467	protein_coding	principal1	8	1	124897886	4464
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000149896	processed_transcript		5	1	149184781	698
ENSMUSG00000081315	unprocessed_pseudogene	Olfr621-ps1	ENSMUST00000119741	unprocessed_pseudogene		7	-1	103629958	938
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000200759	retained_intron		5	1	149186253	2752
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000201232	retained_intron		5	1	149188859	1282
ENSMUSG00000104253	TEC	Gm37174	ENSMUST00000194699	TEC		1	1	121328092	3058
ENSMUSG00000031986	protein_coding	Sprtn	ENSMUST00000212724	processed_transcript		8	1	124901815	700
ENSMUSG00000041264	protein_coding	Uspl1	ENSMUST00000150921	retained_intron		5	1	149191336	5216
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000093534	protein_coding		8	-1	41054794	4148
ENSMUSG00000097191	lincRNA	Mm2pr	ENSMUST00000180733	lincRNA		5	-1	149184063	1740
ENSMUSG00000096003	protein_coding	Gm3500	ENSMUST00000177986	protein_coding	principal1	14	-1	5389049	1955
ENSMUSG00000075172	protein_coding	Olfr1090	ENSMUST00000215991	protein_coding	principal1	2	-1	86758954	2103
ENSMUSG00000023919	protein_coding	Cenpq	ENSMUST00000087114	protein_coding	alternative2	17	-1	40935047	1942
ENSMUSG00000097191	lincRNA	Mm2pr	ENSMUST00000200718	lincRNA		5	-1	149123412	377
ENSMUSG00000075172	protein_coding	Olfr1090	ENSMUST00000217043	protein_coding	principal1	2	-1	86758993	2054
ENSMUSG00000096003	protein_coding	Gm3500	ENSMUST00000178058	protein_coding		14	-1	5373401	609
ENSMUSG00000023919	protein_coding	Cenpq	ENSMUST00000130890	processed_transcript		17	-1	40927204	728
ENSMUSG00000075172	protein_coding	Olfr1090	ENSMUST00000099875	protein_coding	principal1	2	-1	86754736	942
ENSMUSG00000106752	processed_pseudogene	Gm3348	ENSMUST00000177813	processed_pseudogene		14	1	5385806	850
ENSMUSG00000020175	protein_coding	Rab36	ENSMUST00000136944	retained_intron		10	1	75037058	952
ENSMUSG00000023919	protein_coding	Cenpq	ENSMUST00000239430	protein_coding	principal2	17	-1	40934551	1442
ENSMUSG00000101968	antisense	1700027A15Rik	ENSMUST00000188793	antisense		1	1	72984844	423
ENSMUSG00000101968	antisense	1700027A15Rik	ENSMUST00000185768	antisense		1	1	73015691	321
ENSMUSG00000021541	protein_coding	Trpc7	ENSMUST00000022023	protein_coding	principal3	13	-1	56895737	3483
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000198204	protein_coding	alternative2	2	1	25863734	4714
ENSMUSG00000101968	antisense	1700027A15Rik	ENSMUST00000191122	antisense		1	1	73016036	332
ENSMUSG00000101968	antisense	1700027A15Rik	ENSMUST00000188349	antisense		1	1	73022554	617
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000118835	protein_coding		8	-1	41114667	6426
ENSMUSG00000025757	protein_coding	Hspa4l	ENSMUST00000204702	protein_coding	principal1	3	1	40745430	9479
ENSMUSG00000021541	protein_coding	Trpc7	ENSMUST00000109871	protein_coding	alternative1	13	-1	56895776	3519
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000095595	protein_coding	principal3	17	1	23600856	2698
ENSMUSG00000101968	antisense	1700027A15Rik	ENSMUST00000190525	antisense		1	1	73024569	432
ENSMUSG00000025757	protein_coding	Hspa4l	ENSMUST00000203496	protein_coding		3	1	40745484	669
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000115509	protein_coding	alternative2	17	1	23600856	2368
ENSMUSG00000053286	protein_coding	Trmt1l	ENSMUST00000065625	protein_coding	principal1	1	1	151428542	2749
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000051379	protein_coding	principal1	8	-1	41041866	3964
ENSMUSG00000053286	protein_coding	Trmt1l	ENSMUST00000188679	retained_intron		1	1	151428637	3380
ENSMUSG00000025757	protein_coding	Hspa4l	ENSMUST00000203267	retained_intron		3	1	40745583	1997
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000009138	protein_coding	principal1	17	-1	29007995	3351
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000135194	retained_intron		8	-1	41000205	1325
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000071087	protein_coding	principal2	1	1	10038217	4355
ENSMUSG00000025757	protein_coding	Hspa4l	ENSMUST00000108086	protein_coding		3	1	40745868	2744
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000120967	protein_coding		17	1	23600856	2609
ENSMUSG00000053286	protein_coding	Trmt1l	ENSMUST00000188843	retained_intron		1	1	151428642	2371
ENSMUSG00000053286	protein_coding	Trmt1l	ENSMUST00000186244	retained_intron		1	1	151428648	1989
ENSMUSG00000026182	protein_coding	Tnp1	ENSMUST00000027374	protein_coding	principal1	1	-1	73015909	437
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000150788	retained_intron		2	1	25863795	532
ENSMUSG00000025757	protein_coding	Hspa4l	ENSMUST00000203425	retained_intron		3	1	40772644	480
ENSMUSG00000053286	protein_coding	Trmt1l	ENSMUST00000185230	retained_intron		1	1	151428667	1527
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000155626	processed_transcript		8	-1	41016755	669
ENSMUSG00000025757	protein_coding	Hspa4l	ENSMUST00000204174	retained_intron		3	1	40784010	670
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000148062	protein_coding		17	1	23600862	2271
ENSMUSG00000111493	unprocessed_pseudogene	Olfr1091-ps1	ENSMUST00000216676	unprocessed_pseudogene		2	-1	86775912	595
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000117735	protein_coding		8	-1	41016769	556
ENSMUSG00000021541	protein_coding	Trpc7	ENSMUST00000151918	nonsense_mediated_decay		13	-1	56895789	3502
ENSMUSG00000111295	unprocessed_pseudogene	Olfr1092-ps1	ENSMUST00000216544	unprocessed_pseudogene		2	1	86778503	398
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000129227	protein_coding		17	1	23600862	1902
ENSMUSG00000021541	protein_coding	Trpc7	ENSMUST00000173067	nonsense_mediated_decay		13	-1	56888116	2022
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000131965	protein_coding		8	-1	41016320	364
ENSMUSG00000053286	protein_coding	Trmt1l	ENSMUST00000189655	nonsense_mediated_decay		1	1	151428706	2441
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000123866	protein_coding		17	1	23600941	1074
ENSMUSG00000021541	protein_coding	Trpc7	ENSMUST00000173513	protein_coding		13	-1	56888116	2239
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000119274	protein_coding	principal1	17	-1	29007995	3354
ENSMUSG00000103928	TEC	Gm37893	ENSMUST00000192826	TEC		1	1	151445305	2437
ENSMUSG00000021541	protein_coding	Trpc7	ENSMUST00000173466	nonsense_mediated_decay		13	-1	56888116	2603
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000125912	retained_intron		17	1	23605481	531
ENSMUSG00000021541	protein_coding	Trpc7	ENSMUST00000174457	protein_coding		13	-1	56895737	2667
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000117606	protein_coding		17	1	23605505	891
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000156732	protein_coding		17	-1	28973077	880
ENSMUSG00000021541	protein_coding	Trpc7	ENSMUST00000173817	protein_coding		13	-1	56895993	2905
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000155174	processed_transcript		8	-1	41039587	608
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000232836	protein_coding	principal1	17	-1	29000691	2778
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000141431	protein_coding		17	-1	28982186	859
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000142936	processed_transcript		8	-1	41054783	780
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000127665	retained_intron		8	-1	41022902	617
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000143853	protein_coding		8	-1	41082776	641
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000122285	nonsense_mediated_decay		17	1	23605514	909
ENSMUSG00000036437	protein_coding	Npy1r	ENSMUST00000212588	protein_coding	principal1	8	1	66697192	2770
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000118369	protein_coding		17	1	23605514	1006
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000145860	protein_coding		8	-1	41133726	2686
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000138487	protein_coding		17	1	23605515	844
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000155055	protein_coding		8	-1	41133718	336
ENSMUSG00000036437	protein_coding	Npy1r	ENSMUST00000039303	protein_coding	principal1	8	1	66697422	3001
ENSMUSG00000023902	protein_coding	Zscan10	ENSMUST00000133749	retained_intron		17	1	23607490	548
ENSMUSG00000023921	protein_coding	Mmut	ENSMUST00000169611	protein_coding	principal1	17	1	40934685	3674
ENSMUSG00000045636	protein_coding	Mtus1	ENSMUST00000059115	protein_coding		8	-1	41133726	6548
ENSMUSG00000023921	protein_coding	Mmut	ENSMUST00000233222	protein_coding		17	1	40955188	590
ENSMUSG00000095203	processed_pseudogene	Gm13810	ENSMUST00000118584	processed_pseudogene		2	-1	100628043	1347
ENSMUSG00000117985	lincRNA	Gm32548	ENSMUST00000237598	lincRNA		18	1	73711328	861
ENSMUSG00000085672	antisense	Gm16193	ENSMUST00000125903	antisense		8	1	41053110	778
ENSMUSG00000030424	transcribed_unprocessed_pseudogene	Zfp939	ENSMUST00000186855	processed_transcript		7	1	39449518	2480
ENSMUSG00000030424	transcribed_unprocessed_pseudogene	Zfp939	ENSMUST00000061201	transcribed_unprocessed_pseudogene		7	1	39459816	2131
ENSMUSG00000118321	processed_pseudogene	Gm17943	ENSMUST00000238169	processed_pseudogene		18	1	73730765	664
ENSMUSG00000026484	protein_coding	Rnf2	ENSMUST00000190070	protein_coding		1	-1	151476162	817
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000114033	protein_coding	alternative2	17	1	34898469	3882
ENSMUSG00000051493	protein_coding	Olfr974	ENSMUST00000213246	protein_coding	principal1	9	1	39937501	3561
ENSMUSG00000110454	lincRNA	Gm45911	ENSMUST00000211844	lincRNA		8	1	66780080	601
ENSMUSG00000100490	unprocessed_pseudogene	Gm28455	ENSMUST00000189105	unprocessed_pseudogene		7	1	39489438	1290
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000143606	retained_intron		1	1	10038226	3383
ENSMUSG00000051493	protein_coding	Olfr974	ENSMUST00000062833	protein_coding	principal1	9	1	39942215	1080
ENSMUSG00000020704	protein_coding	Asic2	ENSMUST00000021045	protein_coding	principal3	11	-1	81153321	3436
ENSMUSG00000048706	protein_coding	Lurap1l	ENSMUST00000055922	protein_coding	principal1	4	1	80910646	3066
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000191360	retained_intron		1	1	10038249	637
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000078061	protein_coding	alternative2	17	1	34898499	3746
ENSMUSG00000025139	protein_coding	Tollip	ENSMUST00000055819	protein_coding		7	-1	141902415	1100
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000117415	protein_coding		1	1	10038262	1272
ENSMUSG00000020704	protein_coding	Asic2	ENSMUST00000066197	protein_coding	alternative1	11	-1	81968457	2700
ENSMUSG00000105668	IG_V_pseudogene	Igkv8-22	ENSMUST00000199501	IG_V_pseudogene		6	-1	70298119	367
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000191521	retained_intron		1	1	10039767	487
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000097342	protein_coding	alternative2	17	1	34898954	3934
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000118263	protein_coding		1	1	10039773	2162
ENSMUSG00000058349	protein_coding	Tas2r117	ENSMUST00000068302	protein_coding	principal1	6	1	132802818	1158
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000122156	protein_coding		1	1	10039773	2535
ENSMUSG00000039187	protein_coding	Fanci	ENSMUST00000118959	protein_coding		7	1	79392308	1301
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000013931	protein_coding	principal4	17	1	34898971	4026
ENSMUSG00000108250	unprocessed_pseudogene	Tas2r111-ps2	ENSMUST00000203794	unprocessed_pseudogene		6	1	132820318	901
ENSMUSG00000107683	processed_pseudogene	Gm44139	ENSMUST00000204903	processed_pseudogene		6	-1	132825238	373
ENSMUSG00000109384	processed_pseudogene	Gm17931	ENSMUST00000208132	processed_pseudogene		7	1	99996776	634
ENSMUSG00000025139	protein_coding	Tollip	ENSMUST00000001950	protein_coding	principal1	7	-1	141902487	3788
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000190063	retained_intron		1	1	10039777	454
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000146418	processed_transcript		17	1	34899694	675
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000119714	protein_coding		1	1	10039785	1268
ENSMUSG00000035342	protein_coding	Lzts2	ENSMUST00000237148	protein_coding		19	1	45014414	398
ENSMUSG00000057381	protein_coding	Tas2r123	ENSMUST00000071696	protein_coding	principal1	6	1	132847142	1002
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000066936	protein_coding	principal1	2	1	26315515	3384
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000138500	retained_intron		17	1	34905203	729
ENSMUSG00000025139	protein_coding	Tollip	ENSMUST00000130439	protein_coding		7	-1	141902308	1892
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000134716	retained_intron		1	1	10039823	541
ENSMUSG00000105286	antisense	Gm43140	ENSMUST00000197317	antisense		3	1	33817256	456
ENSMUSG00000035342	protein_coding	Lzts2	ENSMUST00000236512	processed_transcript		19	1	45014476	789
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000150786	retained_intron		17	1	34905240	726
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000078616	protein_coding		2	1	26315592	3127
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000155974	protein_coding		1	1	10040155	445
ENSMUSG00000020175	protein_coding	Rab36	ENSMUST00000147802	protein_coding	principal1	10	1	75037066	3291
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000186294	protein_coding	alternative2	1	1	10046493	3429
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000145624	retained_intron		17	1	34905910	624
ENSMUSG00000030194	protein_coding	Tas2r116	ENSMUST00000032315	protein_coding	principal1	6	1	132855438	918
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000149214	protein_coding		1	1	10056924	458
ENSMUSG00000025139	protein_coding	Tollip	ENSMUST00000151890	protein_coding		7	-1	141918507	1753
ENSMUSG00000025139	protein_coding	Tollip	ENSMUST00000211231	retained_intron		7	-1	141902308	1334
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000066889	protein_coding		2	1	26319773	3432
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000190318	retained_intron		1	1	10071183	5009
ENSMUSG00000092536	bidirectional_promoter_lncRNA	Gm20501	ENSMUST00000211692	bidirectional_promoter_lncRNA		7	-1	141949539	732
ENSMUSG00000107980	TEC	Gm44142	ENSMUST00000203358	TEC		6	1	132860465	311
ENSMUSG00000020175	protein_coding	Rab36	ENSMUST00000020391	protein_coding		10	1	75037084	560
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000145884	protein_coding		2	1	26323591	2717
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000124846	protein_coding		17	1	34906002	1325
ENSMUSG00000020175	protein_coding	Rab36	ENSMUST00000142507	retained_intron		10	1	75037226	2994
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000144299	retained_intron		17	-1	28983746	2313
ENSMUSG00000092536	bidirectional_promoter_lncRNA	Gm20501	ENSMUST00000173624	bidirectional_promoter_lncRNA		7	-1	141946113	561
ENSMUSG00000062952	protein_coding	Tas2r110	ENSMUST00000082014	protein_coding	principal1	6	1	132868008	1002
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000132638	processed_transcript		2	1	26325333	664
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000188249	retained_intron		1	1	10074382	859
ENSMUSG00000092536	bidirectional_promoter_lncRNA	Gm20501	ENSMUST00000211303	bidirectional_promoter_lncRNA		7	-1	141947517	2194
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000126671	retained_intron		17	-1	28974719	486
ENSMUSG00000020175	protein_coding	Rab36	ENSMUST00000122815	retained_intron		10	1	75037273	433
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000153804	retained_intron		1	1	10074860	825
ENSMUSG00000026484	protein_coding	Rnf2	ENSMUST00000187048	protein_coding	principal1	1	-1	151500811	3201
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000233606	nonsense_mediated_decay		17	-1	29007958	1276
ENSMUSG00000020175	protein_coding	Rab36	ENSMUST00000139384	protein_coding		10	1	75037322	576
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000131915	processed_transcript		17	1	34906744	729
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000152895	processed_transcript		2	1	26325844	720
ENSMUSG00000056926	protein_coding	Tas2r113	ENSMUST00000079035	protein_coding	principal1	6	1	132893011	930
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000153064	processed_transcript		2	1	26326034	698
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000003818	protein_coding	principal1	1	-1	121328024	2697
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000140355	retained_intron		17	-1	28980245	1382
ENSMUSG00000020175	protein_coding	Rab36	ENSMUST00000146440	protein_coding	principal1	10	1	75037836	2952
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000125070	processed_transcript		17	-1	28980329	1052
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000114134	protein_coding		2	1	26330391	2043
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000188449	nonsense_mediated_decay		1	1	10074913	538
ENSMUSG00000107594	unprocessed_pseudogene	Tas2r142-ps5	ENSMUST00000204651	unprocessed_pseudogene		6	1	132901963	929
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000127453	protein_coding		2	1	26330434	330
ENSMUSG00000020175	protein_coding	Rab36	ENSMUST00000151432	retained_intron		10	1	75038223	772
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000142923	processed_transcript		17	-1	28979760	529
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000123261	retained_intron		1	1	10087747	647
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000071064	protein_coding	principal1	1	-1	121332589	1292
ENSMUSG00000026484	protein_coding	Rnf2	ENSMUST00000076110	protein_coding	principal1	1	-1	151500955	3160
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000137071	nonsense_mediated_decay		17	1	34907398	1626
ENSMUSG00000059410	protein_coding	Tas2r125	ENSMUST00000076119	protein_coding	principal1	6	1	132909651	937
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000185422	retained_intron		1	1	10095864	336
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000160968	protein_coding	principal1	1	-1	121327746	1204
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000172921	protein_coding		17	1	34907400	583
ENSMUSG00000026484	protein_coding	Rnf2	ENSMUST00000186415	protein_coding		1	-1	151500833	1106
ENSMUSG00000108261	unprocessed_pseudogene	Tas2r146-ps1	ENSMUST00000203065	unprocessed_pseudogene		6	1	132933967	934
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000190625	retained_intron		1	1	10104228	312
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000123981	processed_transcript		2	1	26339431	794
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000145201	retained_intron		17	1	34908645	831
ENSMUSG00000026484	protein_coding	Rnf2	ENSMUST00000188871	retained_intron		1	-1	151472031	658
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000132276	processed_transcript		2	1	26339448	382
ENSMUSG00000020175	protein_coding	Rab36	ENSMUST00000234625	protein_coding	principal1	10	1	75037089	2620
ENSMUSG00000063762	protein_coding	Tas2r129	ENSMUST00000070991	protein_coding	principal1	6	1	132951102	965
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000159085	protein_coding	principal1	1	-1	121327678	1252
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000233864	processed_transcript		17	-1	28991383	694
ENSMUSG00000026484	protein_coding	Rnf2	ENSMUST00000185945	processed_transcript		1	-1	151474119	570
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000233441	protein_coding		17	-1	29007726	1246
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000171268	protein_coding	alternative2	2	1	25863854	3771
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000187226	nonsense_mediated_decay		1	1	10112876	1074
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000233510	nonsense_mediated_decay		17	-1	29007941	856
ENSMUSG00000013787	protein_coding	Ehmt2	ENSMUST00000124002	retained_intron		17	1	34910975	1359
ENSMUSG00000033096	protein_coding	Apmap	ENSMUST00000046399	protein_coding	principal1	2	-1	150608567	2235
ENSMUSG00000026484	protein_coding	Rnf2	ENSMUST00000187991	protein_coding		1	-1	151500794	482
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000186915	protein_coding		1	-1	121327719	674
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000136283	retained_intron		1	1	10115425	778
ENSMUSG00000105746	unprocessed_pseudogene	Gm43595	ENSMUST00000196464	unprocessed_pseudogene		3	-1	90470959	1071
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000159528	retained_intron		1	-1	121307318	334
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000147873	processed_transcript		2	1	26342289	977
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000128164	retained_intron		1	1	10125984	670
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000160688	protein_coding		1	-1	121327793	471
ENSMUSG00000026930	protein_coding	Gpsm1	ENSMUST00000142057	processed_transcript		2	1	26344238	834
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000200434	protein_coding	alternative2	2	1	25863968	3609
ENSMUSG00000038759	protein_coding	Nup205	ENSMUST00000201374	protein_coding	alternative2	6	1	35177421	6411
ENSMUSG00000029605	polymorphic_pseudogene	Oas1b	ENSMUST00000182725	processed_transcript		5	1	120812635	558
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000136898	retained_intron		1	1	10129959	436
ENSMUSG00000033096	protein_coding	Apmap	ENSMUST00000126704	processed_transcript		2	-1	150600254	486
ENSMUSG00000109520	protein_coding	Olfr1493-ps1	ENSMUST00000207208	protein_coding	principal1	19	1	13723278	1777
ENSMUSG00000109520	protein_coding	Olfr1493-ps1	ENSMUST00000208667	protein_coding	principal1	19	1	13723278	1828
ENSMUSG00000056763	protein_coding	Cspp1	ENSMUST00000148663	retained_intron		1	1	10133970	650
ENSMUSG00000113661	processed_pseudogene	Gm48169	ENSMUST00000221061	processed_pseudogene		13	1	65518174	239
ENSMUSG00000038759	protein_coding	Nup205	ENSMUST00000043815	protein_coding	principal2	6	1	35177430	6412
ENSMUSG00000102356	TEC	1700047N06Rik	ENSMUST00000194474	TEC		1	-1	10057944	920
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000114172	protein_coding	alternative2	2	1	25877783	5219
ENSMUSG00000111098	lincRNA	Gm48057	ENSMUST00000214667	lincRNA		10	1	41035195	1019
ENSMUSG00000097562	lincRNA	Gm26639	ENSMUST00000181426	lincRNA		13	-1	65591561	519
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000159192	retained_intron		1	-1	121312414	465
ENSMUSG00000113618	lincRNA	Gm48166	ENSMUST00000222230	lincRNA		13	1	65493490	1660
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000162582	protein_coding		1	-1	121327765	478
ENSMUSG00000050865	protein_coding	Olfr1494	ENSMUST00000214697	processed_transcript		19	1	13740040	1452
ENSMUSG00000111673	antisense	Gm29724	ENSMUST00000214688	antisense		9	-1	31031205	3062
ENSMUSG00000113381	unprocessed_pseudogene	Vmn2r-ps97	ENSMUST00000222427	unprocessed_pseudogene		13	-1	65578024	1630
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000162790	protein_coding		1	-1	121323191	557
ENSMUSG00000111673	antisense	Gm29724	ENSMUST00000216803	antisense		9	-1	31010063	706
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000233329	nonsense_mediated_decay		17	-1	29007951	1268
ENSMUSG00000033096	protein_coding	Apmap	ENSMUST00000145325	processed_transcript		2	-1	150608544	418
ENSMUSG00000113565	processed_pseudogene	Cbx3-ps2	ENSMUST00000099421	processed_pseudogene		13	1	65559168	544
ENSMUSG00000050865	protein_coding	Olfr1494	ENSMUST00000207836	protein_coding	principal1	19	1	13739728	2100
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000162019	retained_intron		1	-1	121319728	613
ENSMUSG00000113641	transcribed_unprocessed_pseudogene	Gm48164	ENSMUST00000222252	transcribed_unprocessed_pseudogene		13	1	65623404	649
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000126619	retained_intron		17	-1	28979745	748
ENSMUSG00000050865	protein_coding	Olfr1494	ENSMUST00000214479	processed_transcript		19	1	13739728	1820
ENSMUSG00000113118	processed_pseudogene	Gm3829	ENSMUST00000222362	processed_pseudogene		13	-1	65579658	619
ENSMUSG00000035342	protein_coding	Lzts2	ENSMUST00000039016	protein_coding	principal1	19	1	45014865	3062
ENSMUSG00000113482	processed_pseudogene	Gm48167	ENSMUST00000222390	processed_pseudogene		13	-1	65542205	216
ENSMUSG00000086407	processed_transcript	Gm14123	ENSMUST00000156345	processed_transcript		2	1	150606233	2658
ENSMUSG00000113468	transcribed_unprocessed_pseudogene	Gm48165	ENSMUST00000223034	processed_transcript		13	1	65487439	1165
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000159125	protein_coding		1	-1	121327682	359
ENSMUSG00000113468	transcribed_unprocessed_pseudogene	Gm48165	ENSMUST00000221770	transcribed_unprocessed_pseudogene		13	1	65487808	649
ENSMUSG00000029605	polymorphic_pseudogene	Oas1b	ENSMUST00000183291	polymorphic_pseudogene		5	1	120812638	1837
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000126893	processed_transcript		17	-1	29007945	1663
ENSMUSG00000038759	protein_coding	Nup205	ENSMUST00000202898	retained_intron		6	1	35177616	2409
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000232724	processed_transcript		17	-1	29007965	1298
ENSMUSG00000113135	lincRNA	Gm48170	ENSMUST00000220469	lincRNA		13	-1	65620243	478
ENSMUSG00000050865	protein_coding	Olfr1494	ENSMUST00000051768	protein_coding	principal1	19	1	13749108	948
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000092766	protein_coding		11	-1	95309602	3414
ENSMUSG00000113955	lincRNA	Gm48168	ENSMUST00000220945	lincRNA		13	-1	65496793	364
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000072621	protein_coding		11	-1	95309602	3324
ENSMUSG00000113008	processed_pseudogene	Gm48171	ENSMUST00000220634	processed_pseudogene		13	1	65514187	327
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000161818	protein_coding		1	-1	121327688	362
ENSMUSG00000043331	protein_coding	Olfr975	ENSMUST00000216647	protein_coding	principal1	9	-1	39952046	2848
ENSMUSG00000035342	protein_coding	Lzts2	ENSMUST00000179108	protein_coding	principal1	19	1	45015200	2798
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000144516	retained_intron		17	-1	29007853	1186
ENSMUSG00000003721	protein_coding	Insig2	ENSMUST00000161068	protein_coding		1	-1	121332550	204
ENSMUSG00000043331	protein_coding	Olfr975	ENSMUST00000054067	protein_coding	principal1	9	-1	39950769	933
ENSMUSG00000098143	processed_pseudogene	Gm26937	ENSMUST00000182628	processed_pseudogene		16	1	74961240	1008
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000129094	retained_intron		17	-1	28991418	460
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000233093	retained_intron		17	-1	28992508	897
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000232723	protein_coding		17	-1	29007912	627
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000114170	retained_intron		2	1	25877857	1673
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000142366	nonsense_mediated_decay		17	-1	29007735	335
ENSMUSG00000035342	protein_coding	Lzts2	ENSMUST00000236377	protein_coding		19	1	45015389	883
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000103159	protein_coding		11	-1	95310201	3248
ENSMUSG00000035342	protein_coding	Lzts2	ENSMUST00000237396	protein_coding		19	1	45016497	348
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000114176	protein_coding	alternative2	2	1	25877863	4166
ENSMUSG00000035342	protein_coding	Lzts2	ENSMUST00000237043	protein_coding		19	1	45018156	1595
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000145298	retained_intron		17	-1	29007896	2767
ENSMUSG00000024006	protein_coding	Stk38	ENSMUST00000233723	retained_intron		17	-1	29007867	820
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000126977	protein_coding	principal3	18	1	4920540	7907
ENSMUSG00000035342	protein_coding	Lzts2	ENSMUST00000178087	protein_coding	principal1	19	1	45018212	2694
ENSMUSG00000095538	protein_coding	Gm21983	ENSMUST00000154724	nonsense_mediated_decay	principal1	7	-1	27181086	1690
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000107734	protein_coding	principal4	11	-1	95310246	3560
ENSMUSG00000018651	protein_coding	Tada2a	ENSMUST00000018795	protein_coding	principal1	11	-1	84129600	2151
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000107733	protein_coding	alternative1	11	-1	95310246	3470
ENSMUSG00000054630	protein_coding	Ugt2b5	ENSMUST00000067790	protein_coding	principal1	5	-1	87140318	1858
ENSMUSG00000031994	protein_coding	Adamts8	ENSMUST00000068135	protein_coding	principal1	9	1	30942562	3631
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000138671	protein_coding		11	-1	95281894	1003
ENSMUSG00000099899	lincRNA	Gm28784	ENSMUST00000187817	lincRNA		1	1	17168403	1011
ENSMUSG00000038759	protein_coding	Nup205	ENSMUST00000201609	processed_transcript		6	1	35205047	4508
ENSMUSG00000018651	protein_coding	Tada2a	ENSMUST00000156151	processed_transcript		11	-1	84082956	399
ENSMUSG00000031994	protein_coding	Adamts8	ENSMUST00000163037	nonsense_mediated_decay		9	1	30943458	3581
ENSMUSG00000106111	unprocessed_pseudogene	Gm5717	ENSMUST00000198243	unprocessed_pseudogene		5	-1	87175290	1062
ENSMUSG00000038759	protein_coding	Nup205	ENSMUST00000201842	retained_intron		6	1	35224574	2752
ENSMUSG00000038759	protein_coding	Nup205	ENSMUST00000200739	retained_intron		6	1	35245174	1299
ENSMUSG00000106330	processed_pseudogene	Gm43369	ENSMUST00000196373	processed_pseudogene		5	-1	87193173	1552
ENSMUSG00000018651	protein_coding	Tada2a	ENSMUST00000141852	protein_coding		11	-1	84093854	891
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000131210	retained_intron		18	1	4920567	1560
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000144456	processed_transcript		11	-1	95310189	657
ENSMUSG00000018651	protein_coding	Tada2a	ENSMUST00000125566	processed_transcript		11	-1	84087460	564
ENSMUSG00000038759	protein_coding	Nup205	ENSMUST00000170234	protein_coding		6	1	35177629	1120
ENSMUSG00000018651	protein_coding	Tada2a	ENSMUST00000134994	processed_transcript		11	-1	84087512	743
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000149356	processed_transcript		11	-1	95291037	438
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000138258	retained_intron		18	1	4920705	1430
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000143254	protein_coding	alternative2	18	1	4921726	6594
ENSMUSG00000029605	polymorphic_pseudogene	Oas1b	ENSMUST00000086377	protein_coding	principal1	5	1	120812635	1832
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000146365	processed_transcript		11	-1	95310208	1954
ENSMUSG00000109673	processed_pseudogene	Gm9712	ENSMUST00000210842	processed_pseudogene		7	1	45933850	311
ENSMUSG00000114286	lincRNA	Gm47850	ENSMUST00000225832	lincRNA		13	1	112764848	194
ENSMUSG00000030786	protein_coding	Itgam	ENSMUST00000064821	protein_coding	alternative2	7	1	128062640	4682
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000154327	processed_transcript		11	-1	95309513	370
ENSMUSG00000109103	processed_pseudogene	Gm18877	ENSMUST00000207706	processed_pseudogene		7	1	20072777	539
ENSMUSG00000038909	protein_coding	Kat7	ENSMUST00000143171	processed_transcript		11	-1	95309569	305
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000153016	protein_coding		18	1	4993813	497
ENSMUSG00000101328	processed_pseudogene	Rpl30-ps6	ENSMUST00000163337	processed_pseudogene		1	1	86473659	348
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000140448	protein_coding	principal3	18	1	4994618	7423
ENSMUSG00000030732	protein_coding	Chrdl2	ENSMUST00000207641	retained_intron		7	1	100006172	2176
ENSMUSG00000106694	TEC	Gm42894	ENSMUST00000200788	TEC		5	-1	130867837	3390
ENSMUSG00000060508	protein_coding	Nlrp9b	ENSMUST00000207805	protein_coding		7	1	19991465	454
ENSMUSG00000074818	protein_coding	Pdzd7	ENSMUST00000038901	processed_transcript		19	-1	45030015	1799
ENSMUSG00000060508	protein_coding	Nlrp9b	ENSMUST00000137183	protein_coding		7	1	20004095	848
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000148564	processed_transcript		18	1	4994936	1218
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000210707	protein_coding	alternative2	18	1	5035166	7633
ENSMUSG00000047969	protein_coding	Olfr1093	ENSMUST00000213354	protein_coding	principal1	2	1	86782479	2240
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000127297	protein_coding	alternative2	18	1	5040226	6243
ENSMUSG00000047969	protein_coding	Olfr1093	ENSMUST00000219561	protein_coding	principal1	2	1	86782479	2124
ENSMUSG00000016529	protein_coding	Il10	ENSMUST00000016673	protein_coding	principal1	1	1	131019845	1310
ENSMUSG00000047969	protein_coding	Olfr1093	ENSMUST00000055273	protein_coding	principal1	2	1	86785732	969
ENSMUSG00000102266	TEC	Gm38106	ENSMUST00000194107	TEC		1	-1	73209423	2534
ENSMUSG00000040189	protein_coding	Ccdc114	ENSMUST00000210602	protein_coding	alternative2	7	1	45924072	2928
ENSMUSG00000030786	protein_coding	Itgam	ENSMUST00000106242	protein_coding	principal3	7	1	128062669	4649
ENSMUSG00000111947	lincRNA	Gm47438	ENSMUST00000217728	lincRNA		10	-1	128082970	1617
ENSMUSG00000020056	protein_coding	Washc3	ENSMUST00000020248	protein_coding	principal3	10	1	88201093	1052
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000131609	nonsense_mediated_decay		18	1	5040228	6420
ENSMUSG00000030786	protein_coding	Itgam	ENSMUST00000120355	protein_coding	alternative2	7	1	128062679	3701
ENSMUSG00000030786	protein_coding	Itgam	ENSMUST00000106240	protein_coding		7	1	128062683	3325
ENSMUSG00000020056	protein_coding	Washc3	ENSMUST00000182299	nonsense_mediated_decay		10	1	88201146	524
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000125512	nonsense_mediated_decay		18	1	5064472	4060
ENSMUSG00000047412	protein_coding	Zbtb44	ENSMUST00000216649	protein_coding		9	1	31030644	3157
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000139761	retained_intron		18	1	5094381	523
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000146723	protein_coding		18	1	5103675	507
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000035597	protein_coding	principal1	10	1	80855275	2869
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000129543	retained_intron		18	1	5114253	1732
ENSMUSG00000020056	protein_coding	Washc3	ENSMUST00000182183	protein_coding	alternative2	10	1	88201152	838
ENSMUSG00000031987	protein_coding	Egln1	ENSMUST00000034469	protein_coding	principal1	8	-1	124949324	3594
ENSMUSG00000053291	protein_coding	Rab4b	ENSMUST00000093040	protein_coding	principal1	7	-1	27178896	1192
ENSMUSG00000047412	protein_coding	Zbtb44	ENSMUST00000115222	protein_coding		9	1	31030646	8861
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000217714	retained_intron		10	1	80855281	577
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000039435	protein_coding		7	-1	31110997	1743
ENSMUSG00000101112	lincRNA	Gm29185	ENSMUST00000190578	lincRNA		1	1	73269064	516
ENSMUSG00000024236	protein_coding	Svil	ENSMUST00000025079	protein_coding	principal3	18	1	5046575	7433
ENSMUSG00000020056	protein_coding	Washc3	ENSMUST00000171151	protein_coding		10	1	88201171	837
ENSMUSG00000040189	protein_coding	Ccdc114	ENSMUST00000210039	protein_coding	alternative2	7	1	45924215	2598
ENSMUSG00000053291	protein_coding	Rab4b	ENSMUST00000153511	nonsense_mediated_decay		7	-1	27178810	949
ENSMUSG00000020056	protein_coding	Washc3	ENSMUST00000182351	retained_intron		10	1	88201184	2848
ENSMUSG00000040189	protein_coding	Ccdc114	ENSMUST00000211628	retained_intron		7	1	45924216	741
ENSMUSG00000104425	lincRNA	Gm38370	ENSMUST00000192545	lincRNA		Y	-1	21575870	1499
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000131529	retained_intron		2	1	25877870	6639
ENSMUSG00000020056	protein_coding	Washc3	ENSMUST00000182619	protein_coding		10	1	88201263	521
ENSMUSG00000040189	protein_coding	Ccdc114	ENSMUST00000211367	protein_coding	alternative2	7	1	45924243	1078
ENSMUSG00000047412	protein_coding	Zbtb44	ENSMUST00000217092	protein_coding	principal1	9	1	31053239	2472
ENSMUSG00000047412	protein_coding	Zbtb44	ENSMUST00000214585	protein_coding		9	1	31053307	2350
ENSMUSG00000047412	protein_coding	Zbtb44	ENSMUST00000213202	nonsense_mediated_decay		9	1	31054252	322
ENSMUSG00000020056	protein_coding	Washc3	ENSMUST00000182359	processed_transcript		10	1	88204546	639
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000218812	retained_intron		10	1	80855332	1638
ENSMUSG00000018166	protein_coding	Erbb3	ENSMUST00000082059	protein_coding	principal1	10	-1	128589652	6016
ENSMUSG00000104425	lincRNA	Gm38370	ENSMUST00000194950	lincRNA		Y	-1	21575417	622
ENSMUSG00000104425	lincRNA	Gm38370	ENSMUST00000193655	lincRNA		Y	-1	21575417	438
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000218727	processed_transcript		10	1	80857120	394
ENSMUSG00000020056	protein_coding	Washc3	ENSMUST00000182211	processed_transcript		10	1	88235429	413
ENSMUSG00000047412	protein_coding	Zbtb44	ENSMUST00000167346	protein_coding		9	1	31053296	1308
ENSMUSG00000039187	protein_coding	Fanci	ENSMUST00000036865	protein_coding	principal1	7	1	79392312	4645
ENSMUSG00000081361	processed_pseudogene	Gm11813	ENSMUST00000118586	processed_pseudogene		4	1	10580812	291
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000220091	protein_coding		10	1	80857121	3629
ENSMUSG00000097701	lincRNA	Gm17508	ENSMUST00000181215	lincRNA		9	-1	31082475	681
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000037580	protein_coding	principal3	2	1	25877873	5881
ENSMUSG00000053291	protein_coding	Rab4b	ENSMUST00000134462	retained_intron		7	-1	27178815	1372
ENSMUSG00000105793	processed_pseudogene	Gm17956	ENSMUST00000199931	processed_pseudogene		3	1	104129424	838
ENSMUSG00000050085	protein_coding	Olfr622	ENSMUST00000216570	protein_coding	principal1	7	-1	103642702	2149
ENSMUSG00000106443	sense_intronic	Gm42702	ENSMUST00000199515	sense_intronic		3	-1	104140001	4217
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000219614	protein_coding		10	1	80862269	777
ENSMUSG00000086080	lincRNA	1700123O12Rik	ENSMUST00000145856	lincRNA		4	-1	10742904	425
ENSMUSG00000050085	protein_coding	Olfr622	ENSMUST00000216337	processed_transcript		7	-1	103642673	1714
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000197917	protein_coding	alternative2	2	1	25877881	3711
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000048706	protein_coding	principal3	4	-1	34614944	2300
ENSMUSG00000104721	sense_intronic	Gm42696	ENSMUST00000199859	sense_intronic		3	-1	104058141	1142
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000218789	protein_coding		10	1	80862739	3151
ENSMUSG00000050085	protein_coding	Olfr622	ENSMUST00000213536	protein_coding	principal1	7	-1	103642675	2219
ENSMUSG00000053291	protein_coding	Rab4b	ENSMUST00000152753	processed_transcript		7	-1	27178888	975
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000219366	retained_intron		10	1	80863003	277
ENSMUSG00000053291	protein_coding	Rab4b	ENSMUST00000131278	retained_intron		7	-1	27174512	556
ENSMUSG00000050085	protein_coding	Olfr622	ENSMUST00000058744	protein_coding	principal1	7	-1	103640236	1105
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000219951	protein_coding		10	1	80863463	718
ENSMUSG00000030786	protein_coding	Itgam	ENSMUST00000119696	processed_transcript		7	1	128062728	338
ENSMUSG00000053291	protein_coding	Rab4b	ENSMUST00000131420	processed_transcript		7	-1	27174459	274
ENSMUSG00000030786	protein_coding	Itgam	ENSMUST00000156593	nonsense_mediated_decay		7	1	128062743	349
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000138568	retained_intron		2	1	25894343	3299
ENSMUSG00000108578	processed_pseudogene	Gm45700	ENSMUST00000205866	processed_pseudogene		7	1	128126835	347
ENSMUSG00000035206	protein_coding	Sppl2b	ENSMUST00000219136	retained_intron		10	1	80863481	513
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000128502	nonsense_mediated_decay		2	1	25900891	592
ENSMUSG00000053291	protein_coding	Rab4b	ENSMUST00000128409	processed_transcript		7	-1	27178876	379
ENSMUSG00000060508	protein_coding	Nlrp9b	ENSMUST00000073151	protein_coding	principal1	7	1	20008023	3346
ENSMUSG00000105113	processed_pseudogene	Gm2622	ENSMUST00000200018	processed_pseudogene		3	-1	56828787	471
ENSMUSG00000053291	protein_coding	Rab4b	ENSMUST00000141906	processed_transcript		7	-1	27178823	400
ENSMUSG00000094825	protein_coding	Gm3194	ENSMUST00000180867	protein_coding	principal5	14	-1	5455467	1813
ENSMUSG00000094825	protein_coding	Gm3194	ENSMUST00000180143	protein_coding	alternative2	14	-1	5449039	780
ENSMUSG00000086080	lincRNA	1700123O12Rik	ENSMUST00000146783	lincRNA		4	-1	10797811	577
ENSMUSG00000114751	TEC	5430425E15Rik	ENSMUST00000224401	TEC		14	1	23519662	1183
ENSMUSG00000110592	lincRNA	4930488N15Rik	ENSMUST00000212830	lincRNA		8	1	115585392	1561
ENSMUSG00000060508	protein_coding	Nlrp9b	ENSMUST00000117909	protein_coding		7	1	20019172	1506
ENSMUSG00000086080	lincRNA	1700123O12Rik	ENSMUST00000133829	lincRNA		4	-1	10797795	588
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000153001	protein_coding		2	1	25903502	990
ENSMUSG00000089661	protein_coding	Mia	ENSMUST00000127491	retained_intron		7	-1	27181127	962
ENSMUSG00000039187	protein_coding	Fanci	ENSMUST00000132091	nonsense_mediated_decay		7	1	79392353	4492
ENSMUSG00000099669	lincRNA	Gm29012	ENSMUST00000187882	lincRNA		1	1	105116454	469
ENSMUSG00000040189	protein_coding	Ccdc114	ENSMUST00000236631	retained_intron		7	1	45928398	2460
ENSMUSG00000099687	protein_coding	Olfr623	ENSMUST00000213840	protein_coding	principal1	7	-1	103663698	3980
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000165124	nonsense_mediated_decay		7	-1	31115275	1861
ENSMUSG00000097366	processed_pseudogene	Gm8177	ENSMUST00000181591	processed_pseudogene		3	-1	57136831	1336
ENSMUSG00000086080	lincRNA	1700123O12Rik	ENSMUST00000141312	lincRNA		4	-1	10797798	660
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000145544	retained_intron		2	1	25908063	2120
ENSMUSG00000086455	lincRNA	Gm11815	ENSMUST00000139423	lincRNA		4	-1	10489362	708
ENSMUSG00000039187	protein_coding	Fanci	ENSMUST00000137667	protein_coding		7	1	79399136	2864
ENSMUSG00000099687	protein_coding	Olfr623	ENSMUST00000068531	protein_coding	principal1	7	-1	103661318	1075
ENSMUSG00000040189	protein_coding	Ccdc114	ENSMUST00000210867	retained_intron		7	1	45928402	2677
ENSMUSG00000058740	protein_coding	Kcnt1	ENSMUST00000199269	retained_intron		2	1	25910894	795
ENSMUSG00000099702	unprocessed_pseudogene	Gm29013	ENSMUST00000187431	unprocessed_pseudogene		1	1	105244425	237
ENSMUSG00000039187	protein_coding	Fanci	ENSMUST00000205817	nonsense_mediated_decay		7	1	79412736	625
ENSMUSG00000102146	lincRNA	Gm38054	ENSMUST00000192380	lincRNA		Y	1	21610496	2167
ENSMUSG00000113874	lincRNA	Gm47868	ENSMUST00000220869	lincRNA		12	-1	39922859	299
ENSMUSG00000106286	processed_pseudogene	Gm43424	ENSMUST00000200484	processed_pseudogene		3	1	57249252	253
ENSMUSG00000074818	protein_coding	Pdzd7	ENSMUST00000169459	protein_coding	principal1	19	-1	45045717	3265
ENSMUSG00000032122	protein_coding	Slc37a2	ENSMUST00000115068	protein_coding	principal3	9	-1	37255738	5943
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000168884	protein_coding	principal1	7	-1	31115282	1762
ENSMUSG00000114147	transcribed_processed_pseudogene	Gm18939	ENSMUST00000222549	transcribed_processed_pseudogene		12	-1	39949115	672
ENSMUSG00000104534	processed_pseudogene	Gm18660	ENSMUST00000199542	processed_pseudogene		3	-1	57272369	629
ENSMUSG00000039187	protein_coding	Fanci	ENSMUST00000206121	nonsense_mediated_decay		7	1	79440668	556
ENSMUSG00000102159	unprocessed_pseudogene	Gm37476	ENSMUST00000193046	unprocessed_pseudogene		Y	1	21619726	696
ENSMUSG00000040189	protein_coding	Ccdc114	ENSMUST00000038720	protein_coding	principal2	7	1	45928398	2453
ENSMUSG00000023883	protein_coding	Phf10	ENSMUST00000024657	protein_coding	principal1	17	-1	14961273	1663
ENSMUSG00000114147	transcribed_processed_pseudogene	Gm18939	ENSMUST00000222820	processed_transcript		12	-1	39950632	1120
ENSMUSG00000110208	antisense	Gm45442	ENSMUST00000210038	antisense		7	-1	45924174	411
ENSMUSG00000102506	unprocessed_pseudogene	Gm37369	ENSMUST00000194179	unprocessed_pseudogene		Y	1	21656866	615
ENSMUSG00000095797	protein_coding	Gm8246	ENSMUST00000180788	protein_coding	principal5	14	-1	5477830	1753
ENSMUSG00000095797	protein_coding	Gm8246	ENSMUST00000179411	protein_coding	alternative2	14	-1	5477830	618
ENSMUSG00000102826	unprocessed_pseudogene	Gm38181	ENSMUST00000181357	unprocessed_pseudogene		Y	1	21686203	720
ENSMUSG00000110634	lincRNA	Gm45895	ENSMUST00000212248	lincRNA		8	1	95910574	1697
ENSMUSG00000023883	protein_coding	Phf10	ENSMUST00000171526	retained_intron		17	-1	14946828	534
ENSMUSG00000100272	processed_pseudogene	Gm28785	ENSMUST00000187478	processed_pseudogene		1	-1	17250492	379
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000108102	protein_coding		7	-1	31115290	1830
ENSMUSG00000089661	protein_coding	Mia	ENSMUST00000121848	protein_coding	alternative2	7	-1	27181157	572
ENSMUSG00000097482	antisense	Gm17634	ENSMUST00000181383	antisense		1	1	105356007	1285
ENSMUSG00000110506	processed_pseudogene	Gm8637	ENSMUST00000212919	processed_pseudogene		8	1	95921529	1085
ENSMUSG00000105240	unprocessed_pseudogene	Gm19418	ENSMUST00000197436	unprocessed_pseudogene		5	-1	87218111	580
ENSMUSG00000100398	processed_pseudogene	Gm5251	ENSMUST00000188959	processed_pseudogene		1	1	17394958	472
ENSMUSG00000045780	protein_coding	Olfr624	ENSMUST00000062144	protein_coding	principal1	7	-1	103671191	5731
ENSMUSG00000023883	protein_coding	Phf10	ENSMUST00000172054	retained_intron		17	-1	14952706	441
ENSMUSG00000097482	antisense	Gm17634	ENSMUST00000189938	antisense		1	1	105356763	344
ENSMUSG00000089661	protein_coding	Mia	ENSMUST00000205990	processed_transcript		7	-1	27180996	259
ENSMUSG00000097482	antisense	Gm17634	ENSMUST00000186958	antisense		1	1	105357149	364
ENSMUSG00000110623	lincRNA	Gm32005	ENSMUST00000212446	lincRNA		8	1	96309519	959
ENSMUSG00000099582	processed_pseudogene	Gm29014	ENSMUST00000191422	processed_pseudogene		1	1	105321121	326
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000171259	protein_coding		7	-1	31102514	621
ENSMUSG00000023883	protein_coding	Phf10	ENSMUST00000168938	nonsense_mediated_decay		17	-1	14961273	3901
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000171225	protein_coding		7	-1	31099285	469
ENSMUSG00000089661	protein_coding	Mia	ENSMUST00000071986	protein_coding	principal2	7	-1	27181149	566
ENSMUSG00000023883	protein_coding	Phf10	ENSMUST00000167805	retained_intron		17	-1	14959527	597
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000164340	retained_intron		7	-1	31100283	920
ENSMUSG00000032122	protein_coding	Slc37a2	ENSMUST00000161114	protein_coding	alternative2	9	-1	37255414	2945
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000167719	retained_intron		7	-1	31103190	679
ENSMUSG00000110889	processed_pseudogene	Gm19611	ENSMUST00000216401	processed_pseudogene		10	-1	41049104	1865
ENSMUSG00000110633	lincRNA	Gm32122	ENSMUST00000212119	lincRNA		8	-1	96403862	2259
ENSMUSG00000094578	protein_coding	Gm3187	ENSMUST00000181603	protein_coding	principal5	14	1	5484216	1744
ENSMUSG00000094578	protein_coding	Gm3187	ENSMUST00000178429	protein_coding	alternative2	14	1	5484207	618
ENSMUSG00000050088	protein_coding	1600012H06Rik	ENSMUST00000052691	protein_coding	principal1	17	1	14943184	2506
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000165480	retained_intron		7	-1	31103463	541
ENSMUSG00000050272	protein_coding	Dscam	ENSMUST00000056102	protein_coding	principal1	16	-1	97170752	8737
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000164929	protein_coding		7	-1	31111958	1110
ENSMUSG00000073943	protein_coding	Olfr625-ps1	ENSMUST00000098195	protein_coding	principal5	7	1	103682720	966
ENSMUSG00000073943	protein_coding	Olfr625-ps1	ENSMUST00000190218	protein_coding	alternative2	7	1	103682750	927
ENSMUSG00000001249	protein_coding	Hpn	ENSMUST00000168623	retained_intron		7	-1	31111009	351
ENSMUSG00000047496	protein_coding	Rnf152	ENSMUST00000058688	protein_coding	principal1	1	-1	105356670	8492
ENSMUSG00000032122	protein_coding	Slc37a2	ENSMUST00000162018	retained_intron		9	-1	37235154	2223
ENSMUSG00000081038	unprocessed_pseudogene	Olfr626-ps1	ENSMUST00000121147	unprocessed_pseudogene		7	-1	103692117	318
ENSMUSG00000050272	protein_coding	Dscam	ENSMUST00000232829	protein_coding		16	-1	96622754	1738
ENSMUSG00000046922	protein_coding	Gpr6	ENSMUST00000061796	protein_coding	principal1	10	-1	41072285	1786
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000072239	protein_coding		10	-1	91171582	3533
ENSMUSG00000047496	protein_coding	Rnf152	ENSMUST00000172299	protein_coding	principal1	1	-1	105356710	8406
ENSMUSG00000117179	antisense	Gm49907	ENSMUST00000233591	antisense		16	1	96634370	915
ENSMUSG00000043099	protein_coding	Hic1	ENSMUST00000055619	protein_coding	principal1	11	-1	75169519	3497
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000156987	processed_transcript		4	-1	34614911	3089
ENSMUSG00000030732	protein_coding	Chrdl2	ENSMUST00000032977	protein_coding	principal3	7	1	100006404	1520
ENSMUSG00000085275	lincRNA	Gm14487	ENSMUST00000145413	lincRNA		2	1	30534729	1259
ENSMUSG00000111576	lincRNA	Gm32284	ENSMUST00000213704	lincRNA		10	1	41075368	1484
ENSMUSG00000057425	protein_coding	Ugt2b37	ENSMUST00000075858	protein_coding	principal1	5	-1	87254804	1894
ENSMUSG00000117000	processed_transcript	Gm32509	ENSMUST00000232800	antisense		16	1	96723500	3133
ENSMUSG00000043099	protein_coding	Hic1	ENSMUST00000131720	processed_transcript		11	-1	75168146	645
ENSMUSG00000111797	antisense	Gm48081	ENSMUST00000214389	antisense		9	1	37255498	652
ENSMUSG00000030732	protein_coding	Chrdl2	ENSMUST00000107084	protein_coding	alternative2	7	1	100009914	1484
ENSMUSG00000117000	processed_transcript	Gm32509	ENSMUST00000233368	retained_intron		16	1	96723512	584
ENSMUSG00000117324	antisense	Gm32432	ENSMUST00000232934	antisense		16	1	96918732	1510
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000108142	protein_coding	alternative2	4	-1	34614913	2266
ENSMUSG00000117324	antisense	Gm32432	ENSMUST00000232718	antisense		16	1	96918757	1522
ENSMUSG00000030732	protein_coding	Chrdl2	ENSMUST00000144808	protein_coding		7	1	100022099	741
ENSMUSG00000096286	processed_pseudogene	Gm8266	ENSMUST00000179745	processed_pseudogene		14	-1	5567904	1192
ENSMUSG00000097780	processed_pseudogene	Gm26746	ENSMUST00000181722	processed_pseudogene		14	-1	5531664	487
ENSMUSG00000050088	protein_coding	1600012H06Rik	ENSMUST00000164837	protein_coding	principal1	17	1	14943230	2523
ENSMUSG00000110717	lincRNA	1700047G07Rik	ENSMUST00000212030	lincRNA		8	1	96512340	451
ENSMUSG00000110717	lincRNA	1700047G07Rik	ENSMUST00000212351	lincRNA		8	1	96512342	842
ENSMUSG00000084996	lincRNA	Gm11419	ENSMUST00000150772	lincRNA		11	1	81985406	683
ENSMUSG00000109297	lincRNA	Gm31522	ENSMUST00000207942	lincRNA		11	-1	82019967	762
ENSMUSG00000110567	lincRNA	Gm45703	ENSMUST00000212293	lincRNA		8	-1	97164356	891
ENSMUSG00000097853	protein_coding	Gm3532	ENSMUST00000181880	protein_coding	principal1	14	1	5538496	1396
ENSMUSG00000110715	processed_pseudogene	Gm5131	ENSMUST00000212776	processed_pseudogene		8	1	97163793	1238
ENSMUSG00000047363	protein_coding	Cstad	ENSMUST00000102853	protein_coding	principal1	2	1	30595040	819
ENSMUSG00000057699	protein_coding	Tas2r131	ENSMUST00000082085	protein_coding	principal1	6	-1	132957919	1036
ENSMUSG00000050088	protein_coding	1600012H06Rik	ENSMUST00000174004	protein_coding	principal1	17	1	14943269	1466
ENSMUSG00000047363	protein_coding	Cstad	ENSMUST00000129719	processed_transcript		2	1	30605217	468
ENSMUSG00000107466	processed_pseudogene	Gm44425	ENSMUST00000203739	processed_pseudogene		6	1	132974377	429
ENSMUSG00000046722	protein_coding	Cdc42se1	ENSMUST00000053872	protein_coding	principal1	3	1	95228732	2805
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000217449	processed_transcript		10	-1	91170462	2115
ENSMUSG00000062528	protein_coding	Tas2r109	ENSMUST00000067539	protein_coding	principal1	6	-1	132980965	951
ENSMUSG00000095295	protein_coding	Gm3488	ENSMUST00000181562	protein_coding	principal5	14	1	5501674	1945
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000132918	processed_transcript		4	-1	34598751	1750
ENSMUSG00000050088	protein_coding	1600012H06Rik	ENSMUST00000174163	processed_transcript		17	1	14943271	772
ENSMUSG00000046722	protein_coding	Cdc42se1	ENSMUST00000149804	retained_intron		3	1	95228810	653
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000125218	processed_transcript		4	-1	34614909	646
ENSMUSG00000001018	protein_coding	Snapin	ENSMUST00000107352	retained_intron		3	-1	90490428	1843
ENSMUSG00000107544	processed_pseudogene	Gm44426	ENSMUST00000204258	processed_pseudogene		6	1	132997753	355
ENSMUSG00000095295	protein_coding	Gm3488	ENSMUST00000178220	protein_coding	alternative2	14	1	5517172	519
ENSMUSG00000062901	protein_coding	Klhl24	ENSMUST00000023509	protein_coding	principal1	16	1	20097542	8172
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000154858	processed_transcript		4	-1	34614904	771
ENSMUSG00000107808	unprocessed_pseudogene	Gm18689	ENSMUST00000203969	unprocessed_pseudogene		6	-1	133002649	902
ENSMUSG00000044098	protein_coding	Rsbn1	ENSMUST00000051139	protein_coding	principal2	3	1	103914120	4762
ENSMUSG00000028838	protein_coding	Extl1	ENSMUST00000030643	protein_coding	principal1	4	-1	134372558	4126
ENSMUSG00000019362	protein_coding	D8Ertd738e	ENSMUST00000019506	protein_coding	principal1	8	-1	84249719	616
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000150116	processed_transcript		4	-1	34614903	655
ENSMUSG00000107746	unprocessed_pseudogene	Gm18690	ENSMUST00000204488	unprocessed_pseudogene		6	-1	133018378	985
ENSMUSG00000046722	protein_coding	Cdc42se1	ENSMUST00000107201	protein_coding	principal1	3	1	95228952	907
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000140334	protein_coding		4	-1	34614893	838
ENSMUSG00000024847	protein_coding	Aip	ENSMUST00000117831	protein_coding	principal1	19	-1	4125858	1378
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000133107	processed_transcript		4	-1	34598620	848
ENSMUSG00000101589	processed_pseudogene	Rbm6-ps1	ENSMUST00000186192	processed_pseudogene		1	-1	17400281	2870
ENSMUSG00000097450	processed_transcript	Gm26893	ENSMUST00000181472	processed_transcript		14	-1	5574342	676
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000141529	processed_transcript		4	-1	34595188	754
ENSMUSG00000102048	processed_pseudogene	Gm6075	ENSMUST00000186816	processed_pseudogene		1	-1	17429528	486
ENSMUSG00000045790	protein_coding	Ccdc149	ENSMUST00000198008	protein_coding		5	-1	52471483	2470
ENSMUSG00000046722	protein_coding	Cdc42se1	ENSMUST00000107200	protein_coding		3	1	95232287	637
ENSMUSG00000097450	processed_transcript	Gm26893	ENSMUST00000180602	processed_transcript		14	-1	5574322	677
ENSMUSG00000040044	protein_coding	Orc3	ENSMUST00000145619	processed_transcript		4	-1	34576896	862
ENSMUSG00000024847	protein_coding	Aip	ENSMUST00000025767	protein_coding	principal1	19	-1	4121575	1261
ENSMUSG00000113870	processed_pseudogene	Gm48185	ENSMUST00000222090	processed_pseudogene		13	1	65649558	327
ENSMUSG00000062901	protein_coding	Klhl24	ENSMUST00000232088	protein_coding		16	1	20097563	840
ENSMUSG00000097450	processed_transcript	Gm26893	ENSMUST00000180965	processed_transcript		14	-1	5574322	2079
ENSMUSG00000061455	protein_coding	Stx17	ENSMUST00000107721	protein_coding		4	1	48124915	1771
ENSMUSG00000044098	protein_coding	Rsbn1	ENSMUST00000068879	protein_coding	principal2	3	1	103914151	6712
ENSMUSG00000046722	protein_coding	Cdc42se1	ENSMUST00000107199	protein_coding		3	1	95232293	652
ENSMUSG00000062901	protein_coding	Klhl24	ENSMUST00000231740	retained_intron		16	1	20097574	2109
ENSMUSG00000097450	processed_transcript	Gm26893	ENSMUST00000181216	processed_transcript		14	-1	5574329	1294
ENSMUSG00000024847	protein_coding	Aip	ENSMUST00000121402	protein_coding		19	-1	4125848	700
ENSMUSG00000036270	protein_coding	Edc4	ENSMUST00000040254	protein_coding	alternative2	8	1	105880881	4780
ENSMUSG00000062901	protein_coding	Klhl24	ENSMUST00000232494	processed_transcript		16	1	20097585	515
ENSMUSG00000024847	protein_coding	Aip	ENSMUST00000236509	retained_intron		19	-1	4121458	357
ENSMUSG00000028838	protein_coding	Extl1	ENSMUST00000132387	processed_transcript		4	-1	134383850	667
ENSMUSG00000097167	antisense	Gm16740	ENSMUST00000181819	antisense		3	1	95217457	956
ENSMUSG00000062901	protein_coding	Klhl24	ENSMUST00000231842	protein_coding		16	1	20097592	741
ENSMUSG00000024847	protein_coding	Aip	ENSMUST00000127767	processed_transcript		19	-1	4124564	347
ENSMUSG00000028838	protein_coding	Extl1	ENSMUST00000142730	processed_transcript		4	-1	134365424	396
ENSMUSG00000024847	protein_coding	Aip	ENSMUST00000136043	retained_intron		19	-1	4125790	674
ENSMUSG00000082077	unprocessed_pseudogene	Olfr260-ps1	ENSMUST00000117279	unprocessed_pseudogene		7	-1	103700754	822
ENSMUSG00000100697	processed_pseudogene	Gm29184	ENSMUST00000190038	processed_pseudogene		1	-1	73312050	334
ENSMUSG00000102230	unprocessed_pseudogene	Gm31335	ENSMUST00000193949	unprocessed_pseudogene		Y	1	21771563	693
ENSMUSG00000105897	unprocessed_pseudogene	Gm7646	ENSMUST00000198590	unprocessed_pseudogene		5	-1	87311817	1559
ENSMUSG00000113461	processed_pseudogene	Gm48186	ENSMUST00000221726	processed_pseudogene		13	1	65653504	239
ENSMUSG00000094822	protein_coding	Olfr243	ENSMUST00000215723	protein_coding	principal1	7	1	103714671	4735
ENSMUSG00000113513	unprocessed_pseudogene	Gm19118	ENSMUST00000222554	unprocessed_pseudogene		13	1	65697063	98
ENSMUSG00000044098	protein_coding	Rsbn1	ENSMUST00000151927	nonsense_mediated_decay		3	1	103914567	3649
ENSMUSG00000061455	protein_coding	Stx17	ENSMUST00000153502	protein_coding		4	1	48124923	618
ENSMUSG00000113260	transcribed_processed_pseudogene	Gm19428	ENSMUST00000220512	transcribed_processed_pseudogene		13	-1	65692996	1995
ENSMUSG00000086717	antisense	Gm15655	ENSMUST00000134649	antisense		8	1	115705078	440
ENSMUSG00000036270	protein_coding	Edc4	ENSMUST00000119261	protein_coding	principal3	8	1	105880951	4645
ENSMUSG00000113260	transcribed_processed_pseudogene	Gm19428	ENSMUST00000220573	processed_transcript		13	-1	65713454	1038
ENSMUSG00000094822	protein_coding	Olfr243	ENSMUST00000098194	protein_coding	principal1	7	1	103716596	951
ENSMUSG00000044098	protein_coding	Rsbn1	ENSMUST00000185731	protein_coding	alternative2	3	1	103928618	684
ENSMUSG00000074818	protein_coding	Pdzd7	ENSMUST00000237962	nonsense_mediated_decay		19	-1	45045643	3100
ENSMUSG00000074818	protein_coding	Pdzd7	ENSMUST00000145391	nonsense_mediated_decay		19	-1	45045643	3161
ENSMUSG00000053192	protein_coding	Mllt11	ENSMUST00000065482	protein_coding	principal1	3	-1	95228677	1923
ENSMUSG00000105933	sense_intronic	Gm43260	ENSMUST00000197378	sense_intronic		3	-1	104183041	2430
ENSMUSG00000074818	protein_coding	Pdzd7	ENSMUST00000238074	nonsense_mediated_decay		19	-1	45045643	2975
ENSMUSG00000074818	protein_coding	Pdzd7	ENSMUST00000237833	nonsense_mediated_decay		19	-1	45045643	2981
ENSMUSG00000105148	sense_intronic	Gm42700	ENSMUST00000199071	sense_intronic		3	-1	104097880	2437
ENSMUSG00000074818	protein_coding	Pdzd7	ENSMUST00000237077	nonsense_mediated_decay		19	-1	45045643	3008
ENSMUSG00000074818	protein_coding	Pdzd7	ENSMUST00000237227	nonsense_mediated_decay		19	-1	45045643	3190
ENSMUSG00000035385	protein_coding	Ccl2	ENSMUST00000000193	protein_coding	principal1	11	1	82035571	813
ENSMUSG00000045790	protein_coding	Ccdc149	ENSMUST00000059428	protein_coding	principal1	5	-1	52471521	3295
ENSMUSG00000105818	sense_intronic	Gm43256	ENSMUST00000199995	sense_intronic		3	-1	104190193	3091
ENSMUSG00000055435	protein_coding	Maf	ENSMUST00000069009	protein_coding	alternative2	8	-1	115707096	3223
ENSMUSG00000045790	protein_coding	Ccdc149	ENSMUST00000213027	protein_coding		5	-1	52405122	1269
ENSMUSG00000099877	lincRNA	Pinc	ENSMUST00000190229	lincRNA		1	-1	73407569	2170
ENSMUSG00000036270	protein_coding	Edc4	ENSMUST00000136048	nonsense_mediated_decay		8	1	105881077	4560
ENSMUSG00000055435	protein_coding	Maf	ENSMUST00000109104	protein_coding	principal2	8	-1	115707794	6360
ENSMUSG00000061455	protein_coding	Stx17	ENSMUST00000107720	protein_coding	principal1	4	1	48124926	5770
ENSMUSG00000106380	antisense	Gm3519	ENSMUST00000196113	antisense		5	1	52441159	1676
ENSMUSG00000099877	lincRNA	Pinc	ENSMUST00000190487	lincRNA		1	-1	73407569	961
ENSMUSG00000001018	protein_coding	Snapin	ENSMUST00000149884	protein_coding	principal1	3	-1	90491033	1928
ENSMUSG00000035385	protein_coding	Ccl2	ENSMUST00000124479	retained_intron		11	1	82035610	1096
ENSMUSG00000087268	lincRNA	Gm14486	ENSMUST00000147959	lincRNA		2	-1	30669908	598
ENSMUSG00000036270	protein_coding	Edc4	ENSMUST00000139154	retained_intron		8	1	105886969	738
ENSMUSG00000110620	lincRNA	Gm45733	ENSMUST00000212988	lincRNA		8	-1	115972071	437
ENSMUSG00000101812	lincRNA	D530049I02Rik	ENSMUST00000186582	lincRNA		1	1	73398968	562
ENSMUSG00000061455	protein_coding	Stx17	ENSMUST00000064765	protein_coding	principal1	4	1	48124935	1531
ENSMUSG00000030196	protein_coding	Tas2r103	ENSMUST00000032317	protein_coding	principal1	6	-1	133037101	939
ENSMUSG00000053192	protein_coding	Mllt11	ENSMUST00000196025	protein_coding	principal1	3	-1	95232168	624
ENSMUSG00000078420	protein_coding	Olfr141	ENSMUST00000216117	protein_coding	principal1	2	-1	86810018	2935
ENSMUSG00000087268	lincRNA	Gm14486	ENSMUST00000144704	lincRNA		2	-1	30678011	644
ENSMUSG00000001018	protein_coding	Snapin	ENSMUST00000185005	nonsense_mediated_decay		3	-1	90490993	1505
ENSMUSG00000107750	TEC	Gm44013	ENSMUST00000204392	TEC		6	-1	140622423	2262
ENSMUSG00000036270	protein_coding	Edc4	ENSMUST00000132680	protein_coding		8	1	105887378	1280
ENSMUSG00000053192	protein_coding	Mllt11	ENSMUST00000198948	protein_coding	principal1	3	-1	95232171	793
ENSMUSG00000100044	processed_pseudogene	Gm9553	ENSMUST00000185703	processed_pseudogene		1	1	73512046	996
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000099355	protein_coding		10	-1	91171552	1953
ENSMUSG00000026238	protein_coding	Ptma	ENSMUST00000045897	protein_coding	principal1	1	1	86526726	1216
ENSMUSG00000086405	lincRNA	9330198N18Rik	ENSMUST00000146702	lincRNA		2	1	30629655	1247
ENSMUSG00000036270	protein_coding	Edc4	ENSMUST00000145618	protein_coding		8	1	105887392	795
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000105293	protein_coding		10	-1	91171552	1842
ENSMUSG00000053192	protein_coding	Mllt11	ENSMUST00000198087	processed_transcript		3	-1	95230472	430
ENSMUSG00000036941	protein_coding	Elac1	ENSMUST00000041138	protein_coding	principal1	18	-1	73754479	4971
ENSMUSG00000081501	unprocessed_pseudogene	Gm13286	ENSMUST00000117750	unprocessed_pseudogene		4	1	88757844	537
ENSMUSG00000051351	protein_coding	Zfp46	ENSMUST00000144217	protein_coding		4	1	136284683	1077
ENSMUSG00000036270	protein_coding	Edc4	ENSMUST00000156357	retained_intron		8	1	105890268	802
ENSMUSG00000001018	protein_coding	Snapin	ENSMUST00000184877	nonsense_mediated_decay		3	-1	90491024	1575
ENSMUSG00000053192	protein_coding	Mllt11	ENSMUST00000199917	processed_transcript		3	-1	95230398	350
ENSMUSG00000004996	protein_coding	Mri1	ENSMUST00000126435	protein_coding	principal1	8	-1	84257324	2819
ENSMUSG00000026238	protein_coding	Ptma	ENSMUST00000186255	protein_coding		1	1	86526736	768
ENSMUSG00000028291	protein_coding	Akirin2	ENSMUST00000084299	protein_coding	principal1	4	1	34550937	1397
ENSMUSG00000026238	protein_coding	Ptma	ENSMUST00000188699	protein_coding		1	1	86526737	604
ENSMUSG00000001018	protein_coding	Snapin	ENSMUST00000107351	retained_intron		3	-1	90490792	958
ENSMUSG00000004996	protein_coding	Mri1	ENSMUST00000125498	protein_coding		8	-1	84256413	684
ENSMUSG00000051351	protein_coding	Zfp46	ENSMUST00000130223	protein_coding		4	1	136284775	570
ENSMUSG00000100505	protein_coding	Gm13283	ENSMUST00000191112	protein_coding	principal1	4	1	88760119	1463
ENSMUSG00000034664	protein_coding	Itga2b	ENSMUST00000103086	protein_coding	principal1	11	-1	102469883	3437
ENSMUSG00000068959	protein_coding	Zfp619	ENSMUST00000108015	protein_coding	principal1	7	1	39517766	5969
ENSMUSG00000028291	protein_coding	Akirin2	ENSMUST00000132230	processed_transcript		4	1	34550951	781
ENSMUSG00000051351	protein_coding	Zfp46	ENSMUST00000132649	processed_transcript		4	1	136285069	596
ENSMUSG00000026238	protein_coding	Ptma	ENSMUST00000186932	processed_transcript		1	1	86526741	476
ENSMUSG00000004996	protein_coding	Mri1	ENSMUST00000005122	nonsense_mediated_decay		8	-1	84257247	804
ENSMUSG00000026238	protein_coding	Ptma	ENSMUST00000188533	protein_coding		1	1	86526807	593
ENSMUSG00000110533	processed_pseudogene	LOC665443	ENSMUST00000212284	processed_pseudogene		8	1	66845797	796
ENSMUSG00000034664	protein_coding	Itga2b	ENSMUST00000134735	processed_transcript		11	-1	102456190	623
ENSMUSG00000117460	transcribed_processed_pseudogene	4921533I20Rik	ENSMUST00000234727	processed_transcript		18	-1	17319730	1657
ENSMUSG00000004996	protein_coding	Mri1	ENSMUST00000140850	processed_transcript		8	-1	84257326	545
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000092219	protein_coding		10	-1	91171568	1854
ENSMUSG00000004996	protein_coding	Mri1	ENSMUST00000127747	retained_intron		8	-1	84257326	1065
ENSMUSG00000034664	protein_coding	Itga2b	ENSMUST00000128752	processed_transcript		11	-1	102457320	672
ENSMUSG00000111939	processed_pseudogene	Gm48177	ENSMUST00000219567	processed_pseudogene		12	-1	77526398	1075
ENSMUSG00000117460	transcribed_processed_pseudogene	4921533I20Rik	ENSMUST00000234739	transcribed_processed_pseudogene		18	-1	17235453	970
ENSMUSG00000112392	lincRNA	Gm35240	ENSMUST00000218335	lincRNA		12	1	77553347	661
ENSMUSG00000113167	TEC	Gm48482	ENSMUST00000222949	TEC		12	-1	14130648	2533
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000215801	processed_transcript		10	-1	91151833	654
ENSMUSG00000117615	lincRNA	4930545E07Rik	ENSMUST00000234987	lincRNA		18	-1	17580990	862
ENSMUSG00000100053	antisense	Gm28154	ENSMUST00000186267	antisense		1	-1	17641081	4218
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000213262	processed_transcript		10	-1	91153694	788
ENSMUSG00000108621	lincRNA	Gm37494	ENSMUST00000190789	lincRNA		7	1	39544402	208
ENSMUSG00000053765	protein_coding	Oas1f	ENSMUST00000057814	protein_coding	principal1	5	1	120847367	1480
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000214391	retained_intron		10	-1	91171524	2520
ENSMUSG00000051351	protein_coding	Zfp46	ENSMUST00000069195	protein_coding	principal1	4	1	136286067	4639
ENSMUSG00000108621	lincRNA	Gm37494	ENSMUST00000191302	lincRNA		7	1	39552500	635
ENSMUSG00000053765	protein_coding	Oas1f	ENSMUST00000123431	nonsense_mediated_decay		5	1	120848372	748
ENSMUSG00000054519	protein_coding	Zfp867	ENSMUST00000057799	protein_coding	principal1	11	-1	59472474	3412
ENSMUSG00000051351	protein_coding	Zfp46	ENSMUST00000130658	protein_coding		4	1	136286104	791
ENSMUSG00000011254	protein_coding	Thg1l	ENSMUST00000011398	protein_coding	principal1	11	-1	45955494	2250
ENSMUSG00000071147	protein_coding	Tas2r140	ENSMUST00000095391	protein_coding	principal1	6	-1	133055816	1000
ENSMUSG00000082789	unprocessed_pseudogene	Gm13284	ENSMUST00000121020	unprocessed_pseudogene		4	1	88763709	547
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000020123	protein_coding	principal1	10	-1	91171578	3772
ENSMUSG00000056820	protein_coding	Tsnax	ENSMUST00000075896	protein_coding	principal1	8	1	125012997	2391
ENSMUSG00000108621	lincRNA	Gm37494	ENSMUST00000188038	lincRNA		7	1	39552501	16021
ENSMUSG00000108621	lincRNA	Gm37494	ENSMUST00000186011	lincRNA		7	1	39552525	430
ENSMUSG00000104150	TEC	Gm44573	ENSMUST00000191753	TEC		7	-1	39544906	2370
ENSMUSG00000011254	protein_coding	Thg1l	ENSMUST00000109254	protein_coding		11	-1	45955188	2202
ENSMUSG00000096516	protein_coding	Olfr628	ENSMUST00000098193	protein_coding	principal1	7	1	103730374	1553
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000216501	retained_intron		10	-1	91171568	4441
ENSMUSG00000107602	unprocessed_pseudogene	Gm18691	ENSMUST00000203593	unprocessed_pseudogene		6	-1	133087888	872
ENSMUSG00000111896	processed_pseudogene	Gm48196	ENSMUST00000218689	processed_pseudogene		12	1	77577094	290
ENSMUSG00000056820	protein_coding	Tsnax	ENSMUST00000212603	protein_coding		8	1	125013049	2169
ENSMUSG00000075416	processed_transcript	Gm14488	ENSMUST00000134755	processed_transcript		2	-1	30720057	668
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000216402	processed_transcript		10	-1	91181315	732
ENSMUSG00000042043	protein_coding	Tbca	ENSMUST00000046644	protein_coding	principal1	13	1	94788910	559
ENSMUSG00000096516	protein_coding	Olfr628	ENSMUST00000218266	protein_coding	principal1	7	1	103731928	951
ENSMUSG00000110683	processed_pseudogene	Gm45874	ENSMUST00000212423	processed_pseudogene		8	-1	125019171	346
ENSMUSG00000107694	processed_pseudogene	Gm8921	ENSMUST00000204306	processed_pseudogene		6	1	133092181	649
ENSMUSG00000034664	protein_coding	Itga2b	ENSMUST00000151625	processed_transcript		11	-1	102458565	968
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000215126	processed_transcript		10	-1	91171112	1213
ENSMUSG00000107642	unprocessed_pseudogene	Tas2r141-ps4	ENSMUST00000205072	unprocessed_pseudogene		6	-1	133096015	946
ENSMUSG00000075416	processed_transcript	Gm14488	ENSMUST00000131207	retained_intron		2	-1	30717043	2941
ENSMUSG00000001415	protein_coding	Smg5	ENSMUST00000001451	protein_coding	principal1	3	1	88336260	4448
ENSMUSG00000019961	protein_coding	Tmpo	ENSMUST00000213270	processed_transcript		10	-1	91181117	471
ENSMUSG00000042043	protein_coding	Tbca	ENSMUST00000220819	nonsense_mediated_decay		13	1	94788910	633
ENSMUSG00000044213	protein_coding	Olfr1094	ENSMUST00000217509	protein_coding	principal1	2	1	86824663	1693
ENSMUSG00000011254	protein_coding	Thg1l	ENSMUST00000133851	processed_transcript		11	-1	45955157	1011
ENSMUSG00000047545	protein_coding	Olfr629	ENSMUST00000216300	protein_coding	principal1	7	-1	103744533	2277
ENSMUSG00000020101	protein_coding	Vsir	ENSMUST00000020301	protein_coding	principal3	10	1	60346851	4846
ENSMUSG00000047545	protein_coding	Olfr629	ENSMUST00000213906	protein_coding	principal1	7	-1	103744943	2548
ENSMUSG00000042043	protein_coding	Tbca	ENSMUST00000220825	protein_coding		13	1	94817734	497
ENSMUSG00000011254	protein_coding	Thg1l	ENSMUST00000133238	processed_transcript		11	-1	45954417	729
ENSMUSG00000094271	protein_coding	Gm13290	ENSMUST00000177806	protein_coding	principal1	4	1	88773834	968
ENSMUSG00000067780	protein_coding	Pi15	ENSMUST00000088476	protein_coding	principal1	1	1	17601901	6923
ENSMUSG00000001016	protein_coding	Ilf2	ENSMUST00000196769	retained_intron		3	1	90476126	1702
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000018645	protein_coding	principal2	11	-1	62457332	9037
ENSMUSG00000042043	protein_coding	Tbca	ENSMUST00000220561	retained_intron		13	1	94836983	461
ENSMUSG00000044213	protein_coding	Olfr1094	ENSMUST00000105211	protein_coding	principal1	2	1	86828676	1147
ENSMUSG00000011254	protein_coding	Thg1l	ENSMUST00000131182	processed_transcript		11	-1	45955483	432
ENSMUSG00000001016	protein_coding	Ilf2	ENSMUST00000197644	retained_intron		3	1	90476140	3167
ENSMUSG00000047545	protein_coding	Olfr629	ENSMUST00000051346	protein_coding	principal1	7	-1	103741322	1122
ENSMUSG00000084145	processed_pseudogene	Gm12263	ENSMUST00000119105	processed_pseudogene		11	-1	59475765	1482
ENSMUSG00000111587	lincRNA	Gm32338	ENSMUST00000214352	lincRNA		10	-1	41138196	874
ENSMUSG00000001016	protein_coding	Ilf2	ENSMUST00000198738	retained_intron		3	1	90476147	1373
ENSMUSG00000096582	protein_coding	Gm13289	ENSMUST00000179158	protein_coding	principal1	4	1	88776922	549
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000065870	protein_coding		4	1	62559847	4698
ENSMUSG00000117836	unprocessed_pseudogene	Vmn2r-ps98	ENSMUST00000224983	unprocessed_pseudogene		13	-1	65734016	2317
ENSMUSG00000100444	lincRNA	C530043A13Rik	ENSMUST00000188155	lincRNA		1	-1	73525627	1512
ENSMUSG00000020101	protein_coding	Vsir	ENSMUST00000105460	protein_coding	alternative1	10	1	60346851	4843
ENSMUSG00000047207	protein_coding	Olfr1495	ENSMUST00000216980	protein_coding	principal1	19	1	13764606	2063
ENSMUSG00000100444	lincRNA	C530043A13Rik	ENSMUST00000189247	lincRNA		1	-1	73525460	3364
ENSMUSG00000047207	protein_coding	Olfr1495	ENSMUST00000215930	protein_coding	principal1	19	1	13765279	2025
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000155712	protein_coding		11	-1	62378517	6328
ENSMUSG00000096591	protein_coding	Gm13272	ENSMUST00000179425	protein_coding	principal1	4	1	88779850	811
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000098031	protein_coding	alternative1	4	1	62583601	2072
ENSMUSG00000100444	lincRNA	C530043A13Rik	ENSMUST00000186453	lincRNA		1	-1	73529790	550
ENSMUSG00000050281	protein_coding	Olfr630	ENSMUST00000106880	protein_coding	principal1	7	-1	103757333	2198
ENSMUSG00000038766	protein_coding	Gabpb2	ENSMUST00000107209	protein_coding	principal2	3	-1	95217709	8357
ENSMUSG00000020101	protein_coding	Vsir	ENSMUST00000164027	processed_transcript		10	1	60346905	371
ENSMUSG00000080142	processed_pseudogene	Gm12838	ENSMUST00000116278	processed_pseudogene		4	-1	115454116	325
ENSMUSG00000047207	protein_coding	Olfr1495	ENSMUST00000061669	protein_coding	principal1	19	1	13768307	1089
ENSMUSG00000050281	protein_coding	Olfr630	ENSMUST00000217072	processed_transcript		7	-1	103757333	2106
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000159315	protein_coding		11	-1	62321221	716
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000146083	processed_transcript		4	1	62604459	488
ENSMUSG00000038766	protein_coding	Gabpb2	ENSMUST00000136139	protein_coding	principal2	3	-1	95217916	8661
ENSMUSG00000096854	protein_coding	Ifnz	ENSMUST00000105144	protein_coding	principal1	4	1	88782131	1462
ENSMUSG00000020101	protein_coding	Vsir	ENSMUST00000169621	processed_transcript		10	1	60346907	387
ENSMUSG00000081330	processed_pseudogene	Gm13013	ENSMUST00000119087	processed_pseudogene		4	-1	136307886	523
ENSMUSG00000100429	lincRNA	Gm29186	ENSMUST00000189178	lincRNA		1	1	73528937	660
ENSMUSG00000097349	processed_pseudogene	Gm26731	ENSMUST00000180683	processed_pseudogene		14	1	5597554	543
ENSMUSG00000038766	protein_coding	Gabpb2	ENSMUST00000141645	retained_intron		3	-1	95191898	4132
ENSMUSG00000035373	protein_coding	Ccl7	ENSMUST00000021011	protein_coding	principal1	11	1	82045712	801
ENSMUSG00000075171	protein_coding	Olfr1095	ENSMUST00000099874	protein_coding	principal1	2	-1	86851696	927
ENSMUSG00000083234	processed_pseudogene	Gm12262	ENSMUST00000119915	processed_pseudogene		11	1	59481973	305
ENSMUSG00000034664	protein_coding	Itga2b	ENSMUST00000149519	processed_transcript		11	-1	102467199	2880
ENSMUSG00000048356	protein_coding	Olfr1496	ENSMUST00000209137	protein_coding	alternative2	19	1	13777878	2394
ENSMUSG00000113775	sense_intronic	Gm48027	ENSMUST00000221111	sense_intronic		13	1	14171053	3436
ENSMUSG00000001415	protein_coding	Smg5	ENSMUST00000192057	retained_intron		3	1	88336311	3119
ENSMUSG00000035270	protein_coding	Impg2	ENSMUST00000160116	protein_coding	alternative2	16	1	56204313	3992
ENSMUSG00000034664	protein_coding	Itga2b	ENSMUST00000131247	processed_transcript		11	-1	102458359	620
ENSMUSG00000029162	protein_coding	Khk	ENSMUST00000201621	protein_coding	principal3	5	1	30921431	1583
ENSMUSG00000034664	protein_coding	Itga2b	ENSMUST00000130433	processed_transcript		11	-1	102460835	772
ENSMUSG00000020101	protein_coding	Vsir	ENSMUST00000169139	retained_intron		10	1	60346984	641
ENSMUSG00000001415	protein_coding	Smg5	ENSMUST00000194942	retained_intron		3	1	88336365	751
ENSMUSG00000099545	protein_coding	Gm13276	ENSMUST00000179372	protein_coding	principal1	4	1	88785709	549
ENSMUSG00000035270	protein_coding	Impg2	ENSMUST00000069778	processed_transcript		16	1	56204332	2820
ENSMUSG00000058662	protein_coding	Olfr69	ENSMUST00000106878	protein_coding	principal1	7	-1	103771594	2829
ENSMUSG00000034664	protein_coding	Itga2b	ENSMUST00000124767	processed_transcript		11	-1	102461937	369
ENSMUSG00000001415	protein_coding	Smg5	ENSMUST00000193007	processed_transcript		3	1	88340720	778
ENSMUSG00000048356	protein_coding	Olfr1496	ENSMUST00000057390	protein_coding	alternative2	19	1	13780548	1067
ENSMUSG00000020101	protein_coding	Vsir	ENSMUST00000170507	protein_coding		10	1	60347012	497
ENSMUSG00000048356	protein_coding	Olfr1496	ENSMUST00000219412	protein_coding	principal2	19	1	13780548	1067
ENSMUSG00000034664	protein_coding	Itga2b	ENSMUST00000145925	processed_transcript		11	-1	102466955	268
ENSMUSG00000014907	protein_coding	Naf1	ENSMUST00000118009	protein_coding	principal1	8	1	66860217	2990
ENSMUSG00000001415	protein_coding	Smg5	ENSMUST00000192009	nonsense_mediated_decay		3	1	88342441	1010
ENSMUSG00000029162	protein_coding	Khk	ENSMUST00000201571	protein_coding		5	1	30921590	1087
ENSMUSG00000034664	protein_coding	Itga2b	ENSMUST00000130757	processed_transcript		11	-1	102470122	427
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000155553	processed_transcript		13	1	14063232	571
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000156740	protein_coding		11	-1	62359015	4215
ENSMUSG00000020101	protein_coding	Vsir	ENSMUST00000105459	protein_coding		10	1	60349323	1290
ENSMUSG00000001415	protein_coding	Smg5	ENSMUST00000193097	retained_intron		3	1	88352491	830
ENSMUSG00000100234	protein_coding	Gm13277	ENSMUST00000178480	protein_coding	principal1	4	1	88788632	549
ENSMUSG00000044040	protein_coding	Olfr1497	ENSMUST00000217384	protein_coding	principal1	19	-1	13798202	1672
ENSMUSG00000038766	protein_coding	Gabpb2	ENSMUST00000070774	retained_intron		3	-1	95217709	3210
ENSMUSG00000014907	protein_coding	Naf1	ENSMUST00000212916	nonsense_mediated_decay		8	1	66860957	595
ENSMUSG00000044040	protein_coding	Olfr1497	ENSMUST00000061993	protein_coding	principal1	19	-1	13795609	945
ENSMUSG00000038766	protein_coding	Gabpb2	ENSMUST00000155555	retained_intron		3	-1	95217916	4552
ENSMUSG00000038766	protein_coding	Gabpb2	ENSMUST00000138862	retained_intron		3	-1	95217916	2323
ENSMUSG00000001415	protein_coding	Smg5	ENSMUST00000192377	retained_intron		3	1	88358194	769
ENSMUSG00000112003	processed_pseudogene	Gm4864	ENSMUST00000219894	processed_pseudogene		12	-1	77625009	1461
ENSMUSG00000109530	unprocessed_pseudogene	Olfr1498-ps1	ENSMUST00000208721	unprocessed_pseudogene		19	-1	13806257	991
ENSMUSG00000101163	protein_coding	Gm13278	ENSMUST00000177771	protein_coding	principal1	4	1	88791550	549
ENSMUSG00000111903	lincRNA	4930458K08Rik	ENSMUST00000219952	lincRNA		12	1	77683061	1264
ENSMUSG00000029162	protein_coding	Khk	ENSMUST00000031053	protein_coding	alternative1	5	1	30921833	1257
ENSMUSG00000038766	protein_coding	Gabpb2	ENSMUST00000107204	protein_coding	alternative2	3	-1	95217754	1539
ENSMUSG00000001415	protein_coding	Smg5	ENSMUST00000193224	processed_transcript		3	1	88358347	833
ENSMUSG00000045395	protein_coding	Olfr1499	ENSMUST00000216659	protein_coding	principal1	19	-1	13819447	1834
ENSMUSG00000110468	lincRNA	Gm39185	ENSMUST00000212941	lincRNA		8	1	66905997	540
ENSMUSG00000112551	processed_pseudogene	Gm8219	ENSMUST00000218309	processed_pseudogene		12	1	77819582	242
ENSMUSG00000110583	processed_pseudogene	Gm7639	ENSMUST00000212608	processed_pseudogene		8	-1	67054133	484
ENSMUSG00000027202	protein_coding	Slc12a1	ENSMUST00000110494	protein_coding	alternative2	2	1	125152505	4740
ENSMUSG00000099518	protein_coding	Gm13275	ENSMUST00000178347	protein_coding	principal1	4	1	88794487	549
ENSMUSG00000110512	lincRNA	Gm45827	ENSMUST00000211955	lincRNA		8	1	67176771	311
ENSMUSG00000001415	protein_coding	Smg5	ENSMUST00000194359	retained_intron		3	1	88360536	424
ENSMUSG00000045395	protein_coding	Olfr1499	ENSMUST00000055672	protein_coding	principal1	19	-1	13815658	1052
ENSMUSG00000038766	protein_coding	Gabpb2	ENSMUST00000145272	processed_transcript		3	-1	95217694	400
ENSMUSG00000029162	protein_coding	Khk	ENSMUST00000202752	protein_coding		5	1	30921858	789
ENSMUSG00000084346	protein_coding	Cyp4a30b	ENSMUST00000119958	protein_coding	principal1	4	1	115452604	1527
ENSMUSG00000096470	protein_coding	Gm9603	ENSMUST00000165814	protein_coding	principal1	14	-1	5687457	2063
ENSMUSG00000099934	processed_pseudogene	Gm17983	ENSMUST00000190766	processed_pseudogene		7	-1	39583758	594
ENSMUSG00000035270	protein_coding	Impg2	ENSMUST00000069936	protein_coding	principal2	16	1	56204338	6890
ENSMUSG00000029162	protein_coding	Khk	ENSMUST00000200978	retained_intron		5	1	30930614	544
ENSMUSG00000107157	processed_pseudogene	Gm3170	ENSMUST00000168753	processed_pseudogene		14	1	5738334	850
ENSMUSG00000110632	processed_pseudogene	Gm45880	ENSMUST00000213041	processed_pseudogene		8	1	67310687	853
ENSMUSG00000038766	protein_coding	Gabpb2	ENSMUST00000098873	protein_coding	principal2	3	-1	95208937	8272
ENSMUSG00000113712	processed_pseudogene	Gm38428	ENSMUST00000222893	processed_pseudogene		13	-1	65762513	1289
ENSMUSG00000046005	lincRNA	D830044D21Rik	ENSMUST00000143315	lincRNA		14	1	31906528	3897
ENSMUSG00000035270	protein_coding	Impg2	ENSMUST00000159842	processed_transcript		16	1	56270184	314
ENSMUSG00000099418	protein_coding	Gm6657	ENSMUST00000211288	protein_coding	principal5	12	1	78194242	1091
ENSMUSG00000090547	protein_coding	Gm8265	ENSMUST00000170469	protein_coding	principal1	14	-1	5633028	475
ENSMUSG00000099418	protein_coding	Gm6657	ENSMUST00000188791	protein_coding	alternative2	12	1	78197174	531
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000101067	protein_coding	alternative2	11	-1	62438481	7243
ENSMUSG00000097024	processed_pseudogene	Gm26557	ENSMUST00000180756	processed_pseudogene		14	1	5782044	493
ENSMUSG00000099418	protein_coding	Gm6657	ENSMUST00000187283	processed_transcript		12	1	78198663	162
ENSMUSG00000099418	protein_coding	Gm6657	ENSMUST00000185497	nonsense_mediated_decay		12	1	78200966	449
ENSMUSG00000074292	lincRNA	Gm10660	ENSMUST00000148610	lincRNA		8	-1	67365004	1203
ENSMUSG00000094370	protein_coding	Gm3373	ENSMUST00000177556	protein_coding	principal5	14	-1	5741577	1955
ENSMUSG00000027202	protein_coding	Slc12a1	ENSMUST00000028630	protein_coding		2	1	125152600	4645
ENSMUSG00000074903	processed_pseudogene	Gm2058	ENSMUST00000178791	processed_pseudogene		7	1	39588931	560
ENSMUSG00000094370	protein_coding	Gm3373	ENSMUST00000169087	protein_coding	alternative2	14	-1	5725943	516
ENSMUSG00000020839	protein_coding	Tmigd1	ENSMUST00000102495	protein_coding	principal1	11	1	76902159	1427
ENSMUSG00000020839	protein_coding	Tmigd1	ENSMUST00000142166	protein_coding		11	1	76904475	513
ENSMUSG00000111496	TEC	Gm47483	ENSMUST00000215840	TEC		10	-1	29353893	2015
ENSMUSG00000040489	protein_coding	Sox30	ENSMUST00000049038	protein_coding	principal1	11	1	45980310	2997
ENSMUSG00000027202	protein_coding	Slc12a1	ENSMUST00000110495	protein_coding	principal2	2	1	125152600	4642
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000033060	protein_coding	principal1	7	1	45215753	2140
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000131911	retained_intron		11	-1	62330044	793
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000161767	retained_intron		11	-1	62330168	667
ENSMUSG00000038528	protein_coding	Mfsd4b5	ENSMUST00000073618	protein_coding		10	-1	39986643	3003
ENSMUSG00000020839	protein_coding	Tmigd1	ENSMUST00000136899	processed_transcript		11	1	76904562	658
ENSMUSG00000082870	processed_pseudogene	Gm12165	ENSMUST00000117047	processed_pseudogene		11	1	46036440	342
ENSMUSG00000035780	protein_coding	Ugt2a3	ENSMUST00000031195	protein_coding	principal1	5	-1	87337195	2117
ENSMUSG00000096629	protein_coding	Gm3383	ENSMUST00000112758	protein_coding	principal5	14	-1	5807958	1813
ENSMUSG00000027202	protein_coding	Slc12a1	ENSMUST00000147095	retained_intron		2	1	125152580	1876
ENSMUSG00000113954	processed_pseudogene	Gm7822	ENSMUST00000222433	processed_pseudogene		13	1	65874239	581
ENSMUSG00000096629	protein_coding	Gm3383	ENSMUST00000178414	protein_coding	alternative2	14	-1	5801530	780
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000161281	retained_intron		11	-1	62330943	643
ENSMUSG00000020839	protein_coding	Tmigd1	ENSMUST00000072633	protein_coding	principal1	11	1	76904545	1366
ENSMUSG00000078789	protein_coding	Dph1	ENSMUST00000044949	protein_coding	principal1	11	-1	75190519	2139
ENSMUSG00000001168	protein_coding	Oas1h	ENSMUST00000072476	protein_coding	principal1	5	1	120861421	1703
ENSMUSG00000086416	antisense	Gm14002	ENSMUST00000123574	antisense		2	-1	125217512	2839
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000161432	retained_intron		11	-1	62344901	800
ENSMUSG00000096629	protein_coding	Gm3383	ENSMUST00000096171	protein_coding	alternative2	14	-1	5807982	748
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000159224	processed_transcript		11	-1	62351390	563
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000210570	retained_intron		7	1	45215791	895
ENSMUSG00000091595	unprocessed_pseudogene	Gm3344	ENSMUST00000169610	unprocessed_pseudogene		14	-1	5613188	603
ENSMUSG00000054526	protein_coding	Olfr1500	ENSMUST00000214475	protein_coding	principal1	19	-1	13830441	2697
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000211594	retained_intron		7	1	45215810	387
ENSMUSG00000054526	protein_coding	Olfr1500	ENSMUST00000067670	protein_coding	principal1	19	-1	13830452	2092
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000210447	protein_coding		7	1	45215823	793
ENSMUSG00000112259	processed_pseudogene	Gm17980	ENSMUST00000217977	processed_pseudogene		10	-1	88273231	2349
ENSMUSG00000001168	protein_coding	Oas1h	ENSMUST00000171820	protein_coding		5	1	120861438	931
ENSMUSG00000038528	protein_coding	Mfsd4b5	ENSMUST00000164566	protein_coding		10	-1	39986646	2372
ENSMUSG00000054526	protein_coding	Olfr1500	ENSMUST00000219674	protein_coding	principal1	19	-1	13830452	2287
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000211744	protein_coding		7	1	45215848	592
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000151498	protein_coding		11	-1	62392659	2979
ENSMUSG00000054526	protein_coding	Olfr1500	ENSMUST00000216287	protein_coding	principal1	19	-1	13830470	2178
ENSMUSG00000061626	protein_coding	Olfr68	ENSMUST00000216811	protein_coding	principal1	7	-1	103779698	4093
ENSMUSG00000054526	protein_coding	Olfr1500	ENSMUST00000215760	protein_coding	principal1	19	-1	13830481	2305
ENSMUSG00000054526	protein_coding	Olfr1500	ENSMUST00000214579	processed_transcript		19	-1	13830488	1899
ENSMUSG00000061626	protein_coding	Olfr68	ENSMUST00000072513	protein_coding	principal1	7	-1	103778343	948
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000161116	processed_transcript		11	-1	62369301	723
ENSMUSG00000054526	protein_coding	Olfr1500	ENSMUST00000217079	protein_coding	principal1	19	-1	13828459	1025
ENSMUSG00000107838	TEC	Gm45769	ENSMUST00000204588	TEC		6	1	133110474	1828
ENSMUSG00000112715	processed_pseudogene	Gm48476	ENSMUST00000218701	processed_pseudogene		10	-1	88310132	320
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000107801	protein_coding	principal1	7	1	45215852	3396
ENSMUSG00000001016	protein_coding	Ilf2	ENSMUST00000001042	protein_coding	principal1	3	1	90476147	2027
ENSMUSG00000047535	protein_coding	Olfr67	ENSMUST00000183254	protein_coding	principal1	7	-1	103791821	3851
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000209437	protein_coding		7	1	45216673	435
ENSMUSG00000001016	protein_coding	Ilf2	ENSMUST00000198325	retained_intron		3	1	90476157	3164
ENSMUSG00000072704	protein_coding	Smim10l1	ENSMUST00000100864	protein_coding	principal3	6	1	133104909	2842
ENSMUSG00000069899	protein_coding	Gm12166	ENSMUST00000093169	protein_coding	principal1	11	-1	46052311	958
ENSMUSG00000078789	protein_coding	Dph1	ENSMUST00000156489	retained_intron		11	-1	75183323	1922
ENSMUSG00000116994	processed_pseudogene	Gm49684	ENSMUST00000232374	processed_pseudogene		16	1	17704343	758
ENSMUSG00000001016	protein_coding	Ilf2	ENSMUST00000198641	retained_intron		3	1	90480679	677
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000209708	retained_intron		7	1	45217211	811
ENSMUSG00000078789	protein_coding	Dph1	ENSMUST00000150910	processed_transcript		11	-1	75181312	725
ENSMUSG00000059150	processed_pseudogene	Rpl26-ps4	ENSMUST00000170279	processed_pseudogene		16	1	17711668	438
ENSMUSG00000115209	lincRNA	Gm34250	ENSMUST00000227172	lincRNA		14	-1	45447073	491
ENSMUSG00000115209	lincRNA	Gm34250	ENSMUST00000228291	lincRNA		14	-1	45444989	241
ENSMUSG00000072704	protein_coding	Smim10l1	ENSMUST00000191462	protein_coding	alternative2	6	1	133105256	574
ENSMUSG00000069899	protein_coding	Gm12166	ENSMUST00000154156	processed_transcript		11	-1	46052321	784
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000097216	protein_coding		7	1	45217211	1948
ENSMUSG00000078789	protein_coding	Dph1	ENSMUST00000148944	processed_transcript		11	-1	75183515	543
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000101068	retained_intron		11	-1	62438515	2815
ENSMUSG00000078789	protein_coding	Dph1	ENSMUST00000139958	protein_coding		11	-1	75191241	877
ENSMUSG00000038528	protein_coding	Mfsd4b5	ENSMUST00000170579	protein_coding	principal1	10	-1	39986639	3542
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000209343	protein_coding		7	1	45217213	560
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000161288	protein_coding		11	-1	62383205	649
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000209678	protein_coding		7	1	45217318	388
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000161699	protein_coding		11	-1	62384843	762
ENSMUSG00000085609	processed_transcript	1700016P03Rik	ENSMUST00000134252	processed_transcript		11	1	75172560	863
ENSMUSG00000038528	protein_coding	Mfsd4b5	ENSMUST00000045524	protein_coding		10	-1	39986640	415
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000162236	protein_coding		11	-1	62383354	781
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000211778	retained_intron		7	1	45218039	403
ENSMUSG00000038528	protein_coding	Mfsd4b5	ENSMUST00000170505	protein_coding		10	-1	39975265	383
ENSMUSG00000072704	protein_coding	Smim10l1	ENSMUST00000187237	nonsense_mediated_decay		6	1	133105290	710
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000127471	protein_coding		11	-1	62457806	2815
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000211138	retained_intron		7	1	45219908	701
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000209818	processed_transcript		7	1	45220446	272
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000210814	processed_transcript		7	1	45222612	178
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000162077	retained_intron		11	-1	62383263	452
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000209478	protein_coding		7	1	45231309	400
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000155486	protein_coding		11	-1	62438515	1695
ENSMUSG00000072704	protein_coding	Smim10l1	ENSMUST00000186945	protein_coding		6	1	133105492	1181
ENSMUSG00000030796	protein_coding	Tead2	ENSMUST00000209222	processed_transcript		7	1	45232148	460
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000160171	retained_intron		11	-1	62395192	690
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000124027	retained_intron		11	-1	62401550	566
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000069456	protein_coding		11	-1	62457323	3171
ENSMUSG00000038268	protein_coding	Ovca2	ENSMUST00000071562	protein_coding	principal1	11	-1	75178835	2670
ENSMUSG00000071335	transcribed_unprocessed_pseudogene	Mfsd4b3-ps	ENSMUST00000095749	processed_transcript		10	-1	39960184	1813
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000141447	protein_coding		11	-1	62458541	646
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000101066	protein_coding	principal2	11	-1	62438515	8852
ENSMUSG00000038268	protein_coding	Ovca2	ENSMUST00000123489	processed_transcript		11	-1	75178787	745
ENSMUSG00000071335	transcribed_unprocessed_pseudogene	Mfsd4b3-ps	ENSMUST00000239163	transcribed_unprocessed_pseudogene		10	-1	39960090	1708
ENSMUSG00000018501	protein_coding	Ncor1	ENSMUST00000037575	protein_coding		11	-1	62359791	4246
ENSMUSG00000110552	lincRNA	Gm45788	ENSMUST00000212210	lincRNA		8	1	97215971	584
ENSMUSG00000110552	lincRNA	Gm45788	ENSMUST00000213049	lincRNA		8	1	97215995	442
ENSMUSG00000031995	protein_coding	St14	ENSMUST00000034478	protein_coding	principal1	9	-1	31131853	3259
ENSMUSG00000112545	lincRNA	1300014J16Rik	ENSMUST00000219015	lincRNA		12	1	80115863	1337
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000084521	protein_coding	principal2	4	1	62619520	3888
ENSMUSG00000020676	protein_coding	Ccl11	ENSMUST00000000342	protein_coding	principal1	11	1	82057823	1082
ENSMUSG00000016528	protein_coding	Mapkapk2	ENSMUST00000016672	protein_coding	principal1	1	-1	131097826	2854
ENSMUSG00000108115	processed_pseudogene	Gm7039	ENSMUST00000205138	processed_pseudogene		6	-1	133114273	346
ENSMUSG00000024556	protein_coding	Me2	ENSMUST00000025439	protein_coding	principal1	18	-1	73815438	2638
ENSMUSG00000016528	protein_coding	Mapkapk2	ENSMUST00000188459	protein_coding		1	-1	131072526	675
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000107424	protein_coding		4	1	62619582	4084
ENSMUSG00000102856	TEC	Gm37084	ENSMUST00000191688	TEC		1	-1	131092149	5898
ENSMUSG00000024556	protein_coding	Me2	ENSMUST00000236922	processed_transcript		18	-1	73815438	1782
ENSMUSG00000031995	protein_coding	St14	ENSMUST00000148789	retained_intron		9	-1	31131796	2686
ENSMUSG00000024556	protein_coding	Me2	ENSMUST00000237619	retained_intron		18	-1	73815449	715
ENSMUSG00000031995	protein_coding	St14	ENSMUST00000217404	retained_intron		9	-1	31103538	3550
ENSMUSG00000024556	protein_coding	Me2	ENSMUST00000235595	retained_intron		18	-1	73815445	3366
ENSMUSG00000031995	protein_coding	St14	ENSMUST00000133904	retained_intron		9	-1	31102920	422
ENSMUSG00000025588	protein_coding	Nat1	ENSMUST00000212171	protein_coding	alternative2	8	1	67480921	1208
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000143042	processed_transcript		4	1	62623531	797
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000154071	retained_intron		4	1	62623709	691
ENSMUSG00000031995	protein_coding	St14	ENSMUST00000214418	nonsense_mediated_decay		9	-1	31131727	686
ENSMUSG00000025588	protein_coding	Nat1	ENSMUST00000026677	protein_coding	principal2	8	1	67490758	1347
ENSMUSG00000031995	protein_coding	St14	ENSMUST00000123557	nonsense_mediated_decay		9	-1	31131796	1064
ENSMUSG00000055594	protein_coding	5530400C23Rik	ENSMUST00000048459	protein_coding	principal1	6	1	133292216	649
ENSMUSG00000081343	processed_pseudogene	Gm16071	ENSMUST00000119589	processed_pseudogene		9	1	31094202	793
ENSMUSG00000100912	processed_pseudogene	Gm2021	ENSMUST00000190623	processed_pseudogene		7	-1	39663009	464
ENSMUSG00000086498	lincRNA	Gm12681	ENSMUST00000132337	lincRNA		4	-1	99161642	700
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000113261	protein_coding		6	1	105677745	2904
ENSMUSG00000037643	protein_coding	Prkci	ENSMUST00000108249	protein_coding	principal1	3	1	30995747	4708
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000142684	retained_intron		4	1	62634378	2217
ENSMUSG00000101901	processed_pseudogene	Gm9230	ENSMUST00000188228	processed_pseudogene		7	-1	39740529	532
ENSMUSG00000037643	protein_coding	Prkci	ENSMUST00000130238	protein_coding		3	1	31005193	614
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000144489	retained_intron		4	1	62634378	2911
ENSMUSG00000051147	protein_coding	Nat2	ENSMUST00000093470	protein_coding	principal1	8	1	67494858	1396
ENSMUSG00000037643	protein_coding	Prkci	ENSMUST00000123971	processed_transcript		3	1	31031722	688
ENSMUSG00000037643	protein_coding	Prkci	ENSMUST00000136086	protein_coding		3	1	31038450	456
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000127254	retained_intron		4	1	62652570	3005
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000126338	protein_coding		4	1	62663622	496
ENSMUSG00000037643	protein_coding	Prkci	ENSMUST00000130706	retained_intron		3	1	31038515	722
ENSMUSG00000051730	protein_coding	Mettl5	ENSMUST00000060447	protein_coding	principal1	2	-1	69885615	968
ENSMUSG00000025776	protein_coding	Crispld1	ENSMUST00000159958	protein_coding	principal1	1	1	17727045	3117
ENSMUSG00000051147	protein_coding	Nat2	ENSMUST00000163856	protein_coding	principal1	8	1	67494948	1463
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000124082	protein_coding		4	1	62668892	916
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000107420	protein_coding		4	1	62674039	2752
ENSMUSG00000016018	protein_coding	Mtrex	ENSMUST00000022281	protein_coding	principal1	13	-1	112927398	3689
ENSMUSG00000025776	protein_coding	Crispld1	ENSMUST00000160305	protein_coding		1	1	17727059	812
ENSMUSG00000051730	protein_coding	Mettl5	ENSMUST00000142127	nonsense_mediated_decay		2	-1	69885597	851
ENSMUSG00000051730	protein_coding	Mettl5	ENSMUST00000135459	retained_intron		2	-1	69874050	316
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000138674	processed_transcript		4	1	62674352	662
ENSMUSG00000025393	protein_coding	Atp5b	ENSMUST00000026459	protein_coding	principal1	10	1	128083273	1916
ENSMUSG00000016018	protein_coding	Mtrex	ENSMUST00000223559	processed_transcript		13	-1	112873019	498
ENSMUSG00000102085	lincRNA	4930435C17Rik	ENSMUST00000210759	lincRNA		7	-1	39910970	974
ENSMUSG00000102085	lincRNA	4930435C17Rik	ENSMUST00000209360	lincRNA		7	-1	39910970	817
ENSMUSG00000051730	protein_coding	Mettl5	ENSMUST00000135487	retained_intron		2	-1	69885604	2090
ENSMUSG00000016018	protein_coding	Mtrex	ENSMUST00000224266	retained_intron		13	-1	112876475	571
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000089208	protein_coding	principal1	6	1	105677775	5179
ENSMUSG00000102227	TEC	Gm37302	ENSMUST00000192958	TEC		7	1	39791254	2998
ENSMUSG00000025393	protein_coding	Atp5b	ENSMUST00000127439	processed_transcript		10	1	128083306	343
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000125369	protein_coding		4	1	62699466	1719
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000113260	protein_coding		6	1	105924800	2531
ENSMUSG00000025776	protein_coding	Crispld1	ENSMUST00000095075	protein_coding	principal1	1	1	17727088	4472
ENSMUSG00000016018	protein_coding	Mtrex	ENSMUST00000224639	retained_intron		13	-1	112881527	717
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000142565	processed_transcript		4	1	62699680	418
ENSMUSG00000029389	protein_coding	Ddx55	ENSMUST00000071057	protein_coding	principal1	5	1	124552864	2799
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000209615	lincRNA		7	-1	39910970	1365
ENSMUSG00000025393	protein_coding	Atp5b	ENSMUST00000139295	retained_intron		10	1	128084433	1288
ENSMUSG00000059810	protein_coding	Rgs3	ENSMUST00000153875	protein_coding		4	1	62700695	2136
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000045555	protein_coding	alternative2	2	1	20510047	5931
ENSMUSG00000099895	antisense	Gm28153	ENSMUST00000189853	antisense		1	-1	17805417	629
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000113258	protein_coding		6	1	106118765	2464
ENSMUSG00000016018	protein_coding	Mtrex	ENSMUST00000225997	retained_intron		13	-1	112927372	2673
ENSMUSG00000085177	antisense	Gm11209	ENSMUST00000130206	antisense		4	-1	62633712	431
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000209680	lincRNA		7	-1	39910970	1083
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000210787	lincRNA		7	-1	39910976	1079
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000210270	lincRNA		7	-1	39910610	485
ENSMUSG00000016018	protein_coding	Mtrex	ENSMUST00000225037	retained_intron		13	-1	112917674	639
ENSMUSG00000019883	protein_coding	Echdc1	ENSMUST00000160399	protein_coding	principal1	10	1	29313166	1845
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000189000	lincRNA		7	-1	39910932	501
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000211126	lincRNA		7	-1	39978233	883
ENSMUSG00000098067	processed_pseudogene	Gm26943	ENSMUST00000182295	processed_pseudogene		13	1	112884226	957
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000210906	lincRNA		7	-1	39978263	1330
ENSMUSG00000025393	protein_coding	Atp5b	ENSMUST00000126040	retained_intron		10	1	128085746	1131
ENSMUSG00000085125	antisense	Gm16070	ENSMUST00000155588	antisense		1	-1	17727284	1902
ENSMUSG00000019883	protein_coding	Echdc1	ENSMUST00000161605	protein_coding		10	1	29313281	581
ENSMUSG00000038417	protein_coding	Fig4	ENSMUST00000043814	protein_coding	principal1	10	-1	41303260	3282
ENSMUSG00000054450	TEC	Gm9945	ENSMUST00000067523	TEC		11	1	53480166	932
ENSMUSG00000024680	protein_coding	Ms4a2	ENSMUST00000186978	protein_coding		19	-1	11623684	2391
ENSMUSG00000025393	protein_coding	Atp5b	ENSMUST00000124993	processed_transcript		10	1	128086230	600
ENSMUSG00000085125	antisense	Gm16070	ENSMUST00000127328	antisense		1	-1	17727646	5210
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000185997	lincRNA		7	-1	39910949	252
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000210716	lincRNA		7	-1	39910970	837
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000114614	protein_coding	alternative2	2	1	20510047	5898
ENSMUSG00000085125	antisense	Gm16070	ENSMUST00000149914	antisense		1	-1	17727255	2146
ENSMUSG00000025393	protein_coding	Atp5b	ENSMUST00000144918	retained_intron		10	1	128087681	948
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000188287	lincRNA		7	-1	39910970	702
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000125904	processed_transcript		6	1	106118918	1536
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000209313	lincRNA		7	-1	39978285	1261
ENSMUSG00000050810	protein_coding	Oog3	ENSMUST00000050933	protein_coding	principal1	4	-1	144162663	1865
ENSMUSG00000113945	transcribed_unprocessed_pseudogene	Vmn2r-ps99	ENSMUST00000221276	processed_transcript		13	1	65875884	1203
ENSMUSG00000025393	protein_coding	Atp5b	ENSMUST00000123803	retained_intron		10	1	128088491	768
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000210401	lincRNA		7	-1	39978286	543
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000209459	lincRNA		7	-1	39910944	362
ENSMUSG00000113945	transcribed_unprocessed_pseudogene	Vmn2r-ps99	ENSMUST00000223517	transcribed_unprocessed_pseudogene		13	1	65878528	2338
ENSMUSG00000066861	protein_coding	Oas1g	ENSMUST00000086368	protein_coding	principal1	5	-1	120887582	1977
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000210126	lincRNA		7	-1	39978319	1330
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000079416	protein_coding		6	1	106119006	2844
ENSMUSG00000029389	protein_coding	Ddx55	ENSMUST00000131631	nonsense_mediated_decay		5	1	124552869	3516
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000185203	lincRNA		7	-1	39910933	562
ENSMUSG00000109083	lincRNA	Gm44992	ENSMUST00000208803	lincRNA		7	-1	39978074	747
ENSMUSG00000025393	protein_coding	Atp5b	ENSMUST00000126751	processed_transcript		10	1	128088552	478
ENSMUSG00000110135	lincRNA	Gm45839	ENSMUST00000209884	lincRNA		7	-1	39797686	399
ENSMUSG00000106303	unprocessed_pseudogene	Gm7652	ENSMUST00000200440	unprocessed_pseudogene		5	-1	87364818	1151
ENSMUSG00000100431	lincRNA	4930558N11Rik	ENSMUST00000211456	lincRNA		7	-1	39797727	1180
ENSMUSG00000105192	TEC	Gm42796	ENSMUST00000199913	TEC		5	1	87355835	1087
ENSMUSG00000025393	protein_coding	Atp5b	ENSMUST00000125992	processed_transcript		10	1	128089041	399
ENSMUSG00000029389	protein_coding	Ddx55	ENSMUST00000136067	processed_transcript		5	1	124552896	445
ENSMUSG00000100431	lincRNA	4930558N11Rik	ENSMUST00000211512	lincRNA		7	-1	39797742	516
ENSMUSG00000100431	lincRNA	4930558N11Rik	ENSMUST00000210899	lincRNA		7	-1	39797727	298
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000130040	processed_transcript		6	1	106119055	1266
ENSMUSG00000100431	lincRNA	4930558N11Rik	ENSMUST00000187626	lincRNA		7	-1	39797727	397
ENSMUSG00000029389	protein_coding	Ddx55	ENSMUST00000111438	protein_coding		5	1	124552914	2737
ENSMUSG00000074841	processed_pseudogene	Cbx3-ps1	ENSMUST00000091539	processed_pseudogene		13	-1	65894759	545
ENSMUSG00000044352	protein_coding	Sowaha	ENSMUST00000104955	protein_coding	principal1	11	-1	53480274	3702
ENSMUSG00000104664	processed_pseudogene	Gm35570	ENSMUST00000198730	processed_pseudogene		5	-1	87370483	681
ENSMUSG00000114625	processed_pseudogene	Gm48218	ENSMUST00000225676	processed_pseudogene		13	1	65908223	682
ENSMUSG00000066861	protein_coding	Oas1g	ENSMUST00000162096	nonsense_mediated_decay		5	-1	120887613	1489
ENSMUSG00000029389	protein_coding	Ddx55	ENSMUST00000144433	processed_transcript		5	1	124552958	477
ENSMUSG00000114013	processed_pseudogene	Gm48219	ENSMUST00000221384	processed_pseudogene		13	1	65912526	234
ENSMUSG00000085939	transcribed_processed_pseudogene	Cd63-ps	ENSMUST00000145417	processed_transcript		18	1	50134726	875
ENSMUSG00000066861	protein_coding	Oas1g	ENSMUST00000161809	retained_intron		5	-1	120879603	769
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000114604	protein_coding	alternative2	2	1	20519791	4786
ENSMUSG00000085939	transcribed_processed_pseudogene	Cd63-ps	ENSMUST00000154992	transcribed_processed_pseudogene		18	1	50134795	717
ENSMUSG00000106397	unprocessed_pseudogene	Gm21049	ENSMUST00000197078	unprocessed_pseudogene		5	-1	87379920	987
ENSMUSG00000029389	protein_coding	Ddx55	ENSMUST00000196021	retained_intron		5	1	124555661	1430
ENSMUSG00000086801	antisense	Gm15943	ENSMUST00000147638	antisense		15	1	58214475	3821
ENSMUSG00000106132	unprocessed_pseudogene	Gm43370	ENSMUST00000196437	unprocessed_pseudogene		5	-1	87402978	284
ENSMUSG00000113723	unprocessed_pseudogene	Vmn2r-ps100	ENSMUST00000221238	unprocessed_pseudogene		13	1	65944036	902
ENSMUSG00000029389	protein_coding	Ddx55	ENSMUST00000142451	processed_transcript		5	1	124561899	824
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000146613	retained_intron		2	1	20519811	3074
ENSMUSG00000111932	processed_pseudogene	Gm18899	ENSMUST00000217663	processed_pseudogene		12	-1	78256435	546
ENSMUSG00000019883	protein_coding	Echdc1	ENSMUST00000020034	protein_coding		10	1	29313500	3856
ENSMUSG00000112391	TEC	Gm48230	ENSMUST00000218041	TEC		12	1	78441595	5152
ENSMUSG00000112090	TEC	Gm48231	ENSMUST00000218155	TEC		12	1	78398135	2406
ENSMUSG00000112506	processed_pseudogene	Gm48224	ENSMUST00000218539	processed_pseudogene		12	-1	78380621	364
ENSMUSG00000112637	TEC	Gm48225	ENSMUST00000217986	TEC		12	1	78261293	5083
ENSMUSG00000019883	protein_coding	Echdc1	ENSMUST00000161426	processed_transcript		10	1	29313663	634
ENSMUSG00000110830	antisense	Gm46218	ENSMUST00000215448	antisense		10	-1	29313825	801
ENSMUSG00000115240	bidirectional_promoter_lncRNA	Gm5144	ENSMUST00000227557	bidirectional_promoter_lncRNA		15	1	11906519	751
ENSMUSG00000115240	bidirectional_promoter_lncRNA	Gm5144	ENSMUST00000227444	bidirectional_promoter_lncRNA		15	1	11906662	803
ENSMUSG00000110830	antisense	Gm46218	ENSMUST00000215520	antisense		10	-1	29313407	1956
ENSMUSG00000111090	TEC	Gm30698	ENSMUST00000214789	TEC		10	1	29362148	3198
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000132395	processed_transcript		6	1	106513558	2290
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000204621	processed_transcript		6	1	106655503	2686
ENSMUSG00000035352	protein_coding	Ccl12	ENSMUST00000000194	protein_coding	principal1	11	1	82101845	537
ENSMUSG00000061906	protein_coding	Ugt2b38	ENSMUST00000072818	protein_coding	principal1	5	-1	87424203	1891
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000123596	retained_intron		6	1	106679270	539
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000066509	protein_coding	alternative2	2	1	20519828	7197
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000230882	protein_coding		15	1	66577560	3263
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000129278	processed_transcript		2	1	20547980	477
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000142626	processed_transcript		6	1	106694153	665
ENSMUSG00000086724	processed_pseudogene	Gm12833	ENSMUST00000136112	processed_pseudogene		4	1	115480800	477
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000123383	processed_transcript		2	1	20548022	514
ENSMUSG00000038844	protein_coding	Kif16b	ENSMUST00000230763	protein_coding	alternative2	2	-1	142901519	6404
ENSMUSG00000025008	protein_coding	Tctn3	ENSMUST00000025981	protein_coding	principal2	19	-1	40612233	2743
ENSMUSG00000035352	protein_coding	Ccl12	ENSMUST00000124916	processed_transcript		11	1	82101852	481
ENSMUSG00000064293	protein_coding	Cntn4	ENSMUST00000113264	protein_coding	principal1	6	1	105677745	5262
ENSMUSG00000113559	lincRNA	Gm40987	ENSMUST00000221856	lincRNA		13	-1	65982781	1588
ENSMUSG00000113559	lincRNA	Gm40987	ENSMUST00000223348	lincRNA		13	-1	65979386	682
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000136870	processed_transcript		2	1	20559935	690
ENSMUSG00000107625	unprocessed_pseudogene	Gm34149	ENSMUST00000203547	unprocessed_pseudogene		6	1	133309929	304
ENSMUSG00000113559	lincRNA	Gm40987	ENSMUST00000220526	lincRNA		13	-1	65982791	1005
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000125556	processed_transcript		2	1	20713311	666
ENSMUSG00000107527	unprocessed_pseudogene	Gm44239	ENSMUST00000204228	unprocessed_pseudogene		6	-1	133381019	271
ENSMUSG00000025008	protein_coding	Tctn3	ENSMUST00000135795	protein_coding	alternative2	19	-1	40612203	1686
ENSMUSG00000024680	protein_coding	Ms4a2	ENSMUST00000025583	protein_coding		19	-1	11623719	1211
ENSMUSG00000113653	processed_pseudogene	Gm48220	ENSMUST00000223087	processed_pseudogene		13	1	65994038	1091
ENSMUSG00000038844	protein_coding	Kif16b	ENSMUST00000043589	protein_coding	principal2	2	-1	142901531	6383
ENSMUSG00000113173	lincRNA	Gm48221	ENSMUST00000221832	lincRNA		13	-1	65995400	1268
ENSMUSG00000025008	protein_coding	Tctn3	ENSMUST00000132452	protein_coding	alternative2	19	-1	40612200	1271
ENSMUSG00000020743	protein_coding	Mif4gd	ENSMUST00000106507	protein_coding	principal1	11	-1	115612503	1656
ENSMUSG00000022358	protein_coding	Fbxo32	ENSMUST00000022986	protein_coding	principal1	15	-1	58214932	6976
ENSMUSG00000025008	protein_coding	Tctn3	ENSMUST00000144566	retained_intron		19	-1	40612188	676
ENSMUSG00000038844	protein_coding	Kif16b	ENSMUST00000142078	retained_intron		2	-1	142648763	1542
ENSMUSG00000067149	protein_coding	Jchain	ENSMUST00000164073	retained_intron		5	-1	88526640	2341
ENSMUSG00000095412	transcribed_unprocessed_pseudogene	Gm5885	ENSMUST00000178578	processed_transcript		6	1	133529189	648
ENSMUSG00000038844	protein_coding	Kif16b	ENSMUST00000211861	protein_coding		2	-1	142901444	4523
ENSMUSG00000095412	transcribed_unprocessed_pseudogene	Gm5885	ENSMUST00000203357	transcribed_unprocessed_pseudogene		6	1	133529222	528
ENSMUSG00000099420	protein_coding	Gm13279	ENSMUST00000178602	protein_coding	principal1	4	1	88797397	549
ENSMUSG00000108023	processed_pseudogene	Gm44245	ENSMUST00000204304	processed_pseudogene		6	-1	133564168	232
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000230915	retained_intron		15	1	66577566	3203
ENSMUSG00000021759	protein_coding	Plpp1	ENSMUST00000016144	protein_coding	principal4	13	1	112800792	1598
ENSMUSG00000038844	protein_coding	Kif16b	ENSMUST00000212106	protein_coding		2	-1	142702671	2158
ENSMUSG00000024680	protein_coding	Ms4a2	ENSMUST00000164792	protein_coding	principal1	19	-1	11623643	1010
ENSMUSG00000095101	protein_coding	Gm13285	ENSMUST00000179725	protein_coding	principal1	4	1	88799665	1462
ENSMUSG00000024680	protein_coding	Ms4a2	ENSMUST00000189641	protein_coding		19	-1	11623659	647
ENSMUSG00000022357	protein_coding	Klhl38	ENSMUST00000022985	protein_coding	principal1	15	-1	58324169	2212
ENSMUSG00000024680	protein_coding	Ms4a2	ENSMUST00000186413	processed_transcript		19	-1	11623688	402
ENSMUSG00000094648	protein_coding	Gm13287	ENSMUST00000179490	protein_coding	principal1	4	1	88803254	549
ENSMUSG00000030798	protein_coding	Cd37	ENSMUST00000098461	protein_coding	principal3	7	-1	45238840	1227
ENSMUSG00000026803	protein_coding	Ttf1	ENSMUST00000100237	protein_coding	principal1	2	1	29060262	4160
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000146488	retained_intron		2	1	20722378	2507
ENSMUSG00000021759	protein_coding	Plpp1	ENSMUST00000070951	protein_coding	alternative1	13	1	112800863	1272
ENSMUSG00000087308	lincRNA	Gm16195	ENSMUST00000130607	lincRNA		17	1	29021293	442
ENSMUSG00000030798	protein_coding	Cd37	ENSMUST00000209779	protein_coding		7	-1	45238815	2541
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000125772	retained_intron		2	1	20722378	4704
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000114607	protein_coding	alternative2	2	1	20722625	3055
ENSMUSG00000086154	bidirectional_promoter_lncRNA	Gm16196	ENSMUST00000137730	bidirectional_promoter_lncRNA		17	-1	29015897	464
ENSMUSG00000086154	bidirectional_promoter_lncRNA	Gm16196	ENSMUST00000233272	bidirectional_promoter_lncRNA		17	-1	29032568	482
ENSMUSG00000070908	protein_coding	Gm13288	ENSMUST00000094977	protein_coding	principal1	4	1	88805531	2850
ENSMUSG00000086154	bidirectional_promoter_lncRNA	Gm16196	ENSMUST00000233751	bidirectional_promoter_lncRNA		17	-1	29032568	1708
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000114606	protein_coding	alternative2	2	1	20737314	5284
ENSMUSG00000030798	protein_coding	Cd37	ENSMUST00000033063	protein_coding	alternative2	7	-1	45239115	1268
ENSMUSG00000086338	protein_coding	Gm13723	ENSMUST00000130722	protein_coding	principal1	2	-1	86874802	5036
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000114608	protein_coding	alternative2	2	1	20737314	6635
ENSMUSG00000026803	protein_coding	Ttf1	ENSMUST00000142786	retained_intron		2	1	29060266	5336
ENSMUSG00000030798	protein_coding	Cd37	ENSMUST00000210226	nonsense_mediated_decay		7	-1	45235499	573
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000139531	processed_transcript		2	1	20798672	407
ENSMUSG00000100713	protein_coding	Ifna7	ENSMUST00000105143	protein_coding	principal1	4	1	88816228	573
ENSMUSG00000067149	protein_coding	Jchain	ENSMUST00000087033	protein_coding	principal1	5	-1	88527891	1393
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000156587	retained_intron		2	1	20807454	2386
ENSMUSG00000101344	lincRNA	Gm29183	ENSMUST00000188600	lincRNA		1	-1	73841917	790
ENSMUSG00000026803	protein_coding	Ttf1	ENSMUST00000122866	retained_intron		2	1	29074761	723
ENSMUSG00000030798	protein_coding	Cd37	ENSMUST00000209677	processed_transcript		7	-1	45237087	600
ENSMUSG00000054477	protein_coding	Kcnn2	ENSMUST00000183623	processed_transcript		18	1	45268860	2376
ENSMUSG00000026803	protein_coding	Ttf1	ENSMUST00000130506	retained_intron		2	1	29083409	266
ENSMUSG00000036617	protein_coding	Etl4	ENSMUST00000114627	protein_coding	principal3	2	1	20289913	7413
ENSMUSG00000030798	protein_coding	Cd37	ENSMUST00000211373	protein_coding	alternative2	7	-1	45238874	1428
ENSMUSG00000022206	protein_coding	Npr3	ENSMUST00000066529	protein_coding	principal2	15	-1	11905639	6892
ENSMUSG00000020743	protein_coding	Mif4gd	ENSMUST00000124407	processed_transcript		11	-1	115612887	1142
ENSMUSG00000030798	protein_coding	Cd37	ENSMUST00000210000	processed_transcript		7	-1	45235458	287
ENSMUSG00000085718	processed_pseudogene	Rpl9-ps3	ENSMUST00000119147	processed_pseudogene		11	1	53501184	576
ENSMUSG00000086418	antisense	Gm13362	ENSMUST00000137186	antisense		2	-1	20713234	839
ENSMUSG00000030798	protein_coding	Cd37	ENSMUST00000210078	protein_coding		7	-1	45239057	743
ENSMUSG00000082788	processed_pseudogene	Gm13396	ENSMUST00000120617	processed_pseudogene		2	-1	29094105	271
ENSMUSG00000086519	lincRNA	Gm13393	ENSMUST00000141935	lincRNA		2	1	29088666	396
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000086854	protein_coding	alternative1	5	-1	103058386	6630
ENSMUSG00000060795	processed_pseudogene	Gm13363	ENSMUST00000122008	processed_pseudogene		2	1	19992921	522
ENSMUSG00000030798	protein_coding	Cd37	ENSMUST00000210372	protein_coding		7	-1	45238796	960
ENSMUSG00000110180	lincRNA	Gm32567	ENSMUST00000211244	lincRNA		8	-1	29235104	682
ENSMUSG00000038876	protein_coding	Rnf146	ENSMUST00000160144	protein_coding	principal1	10	-1	29362442	4323
ENSMUSG00000022206	protein_coding	Npr3	ENSMUST00000226139	processed_transcript		15	-1	11890988	3788
ENSMUSG00000110331	processed_pseudogene	Nudc-ps1	ENSMUST00000209275	processed_pseudogene		8	-1	29286981	551
ENSMUSG00000082164	processed_pseudogene	Gm13360	ENSMUST00000121607	processed_pseudogene		2	-1	20037894	799
ENSMUSG00000109597	processed_pseudogene	Gm45492	ENSMUST00000211611	processed_pseudogene		8	-1	30081960	288
ENSMUSG00000080754	processed_pseudogene	Rpl36-ps7	ENSMUST00000119462	processed_pseudogene		3	1	100008360	315
ENSMUSG00000100246	unprocessed_pseudogene	Gm20879	ENSMUST00000188719	unprocessed_pseudogene		Y	1	89999717	695
ENSMUSG00000109666	lincRNA	Gm39154	ENSMUST00000210257	lincRNA		8	-1	30121214	560
ENSMUSG00000016526	protein_coding	Dyrk3	ENSMUST00000016670	protein_coding	principal1	1	-1	131138340	3164
ENSMUSG00000117475	processed_pseudogene	Gm7788	ENSMUST00000234562	processed_pseudogene		18	1	23216669	943
ENSMUSG00000109586	transcribed_unprocessed_pseudogene	Gm6853	ENSMUST00000211360	processed_transcript		8	-1	30183860	4375
ENSMUSG00000100301	lincRNA	6030407O03Rik	ENSMUST00000191114	lincRNA		1	-1	73743947	1227
ENSMUSG00000022206	protein_coding	Npr3	ENSMUST00000228603	protein_coding	alternative2	15	-1	11905674	2437
ENSMUSG00000109586	transcribed_unprocessed_pseudogene	Gm6853	ENSMUST00000211160	transcribed_unprocessed_pseudogene		8	-1	30183525	1041
ENSMUSG00000020743	protein_coding	Mif4gd	ENSMUST00000137304	processed_transcript		11	-1	115612927	1271
ENSMUSG00000016526	protein_coding	Dyrk3	ENSMUST00000189756	protein_coding		1	-1	131138245	663
ENSMUSG00000110006	lincRNA	Gm45490	ENSMUST00000210084	lincRNA		8	-1	30442224	742
ENSMUSG00000027867	protein_coding	Spag17	ENSMUST00000127518	processed_transcript		3	1	99885406	651
ENSMUSG00000022206	protein_coding	Npr3	ENSMUST00000228489	protein_coding		15	-1	11907287	1969
ENSMUSG00000100533	lincRNA	Gm29504	ENSMUST00000186377	lincRNA		Y	1	90275224	352
ENSMUSG00000100533	lincRNA	Gm29504	ENSMUST00000185605	lincRNA		Y	1	90275224	537
ENSMUSG00000110223	lincRNA	Gm45489	ENSMUST00000211753	lincRNA		8	-1	30513811	443
ENSMUSG00000022206	protein_coding	Npr3	ENSMUST00000226878	processed_transcript		15	-1	11907201	2533
ENSMUSG00000100301	lincRNA	6030407O03Rik	ENSMUST00000189514	lincRNA		1	-1	73864466	2094
ENSMUSG00000038876	protein_coding	Rnf146	ENSMUST00000160372	protein_coding	principal1	10	-1	29362047	1948
ENSMUSG00000093665	unprocessed_pseudogene	Obox3-ps1	ENSMUST00000176885	unprocessed_pseudogene		7	-1	14695674	995
ENSMUSG00000105566	unprocessed_pseudogene	Obox4-ps4	ENSMUST00000196934	unprocessed_pseudogene		7	-1	14713597	397
ENSMUSG00000098330	unprocessed_pseudogene	Gtpbp4-ps1	ENSMUST00000184732	unprocessed_pseudogene		7	-1	14724904	249
ENSMUSG00000097044	lincRNA	4933433F19Rik	ENSMUST00000180571	lincRNA		8	1	30568393	1088
ENSMUSG00000038876	protein_coding	Rnf146	ENSMUST00000162335	protein_coding	principal1	10	-1	29357713	1434
ENSMUSG00000075170	protein_coding	Olfr1097	ENSMUST00000217403	protein_coding	principal1	2	-1	86892216	4430
ENSMUSG00000020743	protein_coding	Mif4gd	ENSMUST00000021087	protein_coding	principal1	11	-1	115612969	1372
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000156695	nonsense_mediated_decay		6	-1	8758399	1493
ENSMUSG00000096178	protein_coding	Gm20837	ENSMUST00000190558	protein_coding	principal1	Y	1	90401248	844
ENSMUSG00000096178	protein_coding	Gm20837	ENSMUST00000178446	protein_coding		Y	1	90402688	498
ENSMUSG00000075170	protein_coding	Olfr1097	ENSMUST00000111576	protein_coding	principal1	2	-1	86892192	4705
ENSMUSG00000098508	unprocessed_pseudogene	Ranbp2-ps2	ENSMUST00000184379	unprocessed_pseudogene		7	-1	14756924	370
ENSMUSG00000100964	unprocessed_pseudogene	Gm29503	ENSMUST00000191044	unprocessed_pseudogene		Y	-1	90531645	930
ENSMUSG00000020743	protein_coding	Mif4gd	ENSMUST00000106506	protein_coding		11	-1	115612878	993
ENSMUSG00000004994	protein_coding	Ccdc130	ENSMUST00000098578	protein_coding	principal3	8	-1	84270380	2119
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000099153	protein_coding	principal3	3	1	33799832	9661
ENSMUSG00000038876	protein_coding	Rnf146	ENSMUST00000161508	protein_coding		10	-1	29362026	945
ENSMUSG00000020743	protein_coding	Mif4gd	ENSMUST00000127132	processed_transcript		11	-1	115612830	828
ENSMUSG00000004994	protein_coding	Ccdc130	ENSMUST00000005120	protein_coding	alternative2	8	-1	84270347	1441
ENSMUSG00000075169	protein_coding	Olfr1098	ENSMUST00000111574	protein_coding	principal1	2	-1	86924545	2885
ENSMUSG00000099619	lincRNA	Gm28300	ENSMUST00000189170	lincRNA		Y	-1	90605864	622
ENSMUSG00000099619	lincRNA	Gm28300	ENSMUST00000185955	lincRNA		Y	-1	90605864	437
ENSMUSG00000112731	sense_intronic	Gm47739	ENSMUST00000219731	sense_intronic		10	-1	53575756	2705
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000199523	retained_intron		3	1	33800175	696
ENSMUSG00000038876	protein_coding	Rnf146	ENSMUST00000214896	protein_coding		10	-1	29362047	781
ENSMUSG00000075169	protein_coding	Olfr1098	ENSMUST00000099872	protein_coding	principal1	2	-1	86923530	948
ENSMUSG00000093549	unprocessed_pseudogene	Obox4-ps36	ENSMUST00000177206	unprocessed_pseudogene		7	1	14767725	723
ENSMUSG00000020743	protein_coding	Mif4gd	ENSMUST00000146244	processed_transcript		11	-1	115612899	869
ENSMUSG00000093664	unprocessed_pseudogene	Obox4-ps37	ENSMUST00000177223	unprocessed_pseudogene		7	1	14778015	276
ENSMUSG00000111322	unprocessed_pseudogene	Gm48002	ENSMUST00000214901	unprocessed_pseudogene		2	-1	86941200	124
ENSMUSG00000020743	protein_coding	Mif4gd	ENSMUST00000148574	protein_coding		11	-1	115612126	628
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000200559	retained_intron		3	1	33800183	680
ENSMUSG00000038876	protein_coding	Rnf146	ENSMUST00000037548	protein_coding	principal1	10	-1	29362442	4402
ENSMUSG00000117684	antisense	4930449E18Rik	ENSMUST00000237596	antisense		19	1	57273960	391
ENSMUSG00000075168	protein_coding	Olfr1099	ENSMUST00000213456	protein_coding	principal1	2	-1	86960693	4867
ENSMUSG00000020743	protein_coding	Mif4gd	ENSMUST00000142637	processed_transcript		11	-1	115612904	621
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000196139	protein_coding		3	1	33800191	740
ENSMUSG00000020743	protein_coding	Mif4gd	ENSMUST00000139556	processed_transcript		11	-1	115612920	299
ENSMUSG00000084898	lincRNA	Gm12371	ENSMUST00000144029	lincRNA		4	1	36952966	1091
ENSMUSG00000080969	processed_pseudogene	Taf9-ps	ENSMUST00000121654	processed_pseudogene		4	-1	37139874	768
ENSMUSG00000075168	protein_coding	Olfr1099	ENSMUST00000099871	protein_coding	principal1	2	-1	86959478	1031
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000200271	protein_coding	alternative2	3	1	33800191	2724
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000112848	protein_coding		5	-1	103100081	6761
ENSMUSG00000004994	protein_coding	Ccdc130	ENSMUST00000164476	retained_intron		8	-1	84261906	1247
ENSMUSG00000004994	protein_coding	Ccdc130	ENSMUST00000172320	nonsense_mediated_decay		8	-1	84266838	736
ENSMUSG00000031028	protein_coding	Tub	ENSMUST00000207583	protein_coding		7	1	108950338	772
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000197741	processed_transcript		5	1	144767732	960
ENSMUSG00000031028	protein_coding	Tub	ENSMUST00000208442	retained_intron		7	1	108950657	1153
ENSMUSG00000004994	protein_coding	Ccdc130	ENSMUST00000166285	retained_intron		8	-1	84262145	696
ENSMUSG00000099399	lincRNA	Gm28301	ENSMUST00000187582	lincRNA		Y	-1	90667625	537
ENSMUSG00000004994	protein_coding	Ccdc130	ENSMUST00000163993	protein_coding		8	-1	84270370	307
ENSMUSG00000099399	lincRNA	Gm28301	ENSMUST00000191048	lincRNA		Y	-1	90667625	352
ENSMUSG00000082732	processed_pseudogene	Rpl23a-ps6	ENSMUST00000119466	processed_pseudogene		4	-1	37239175	468
ENSMUSG00000004994	protein_coding	Ccdc130	ENSMUST00000166728	retained_intron		8	-1	84270367	447
ENSMUSG00000093584	unprocessed_pseudogene	Obox3-ps2	ENSMUST00000177243	unprocessed_pseudogene		7	-1	14801826	1004
ENSMUSG00000055763	processed_pseudogene	Rybp-ps	ENSMUST00000069489	processed_pseudogene		13	1	66007737	681
ENSMUSG00000113686	processed_pseudogene	Gm19189	ENSMUST00000221689	processed_pseudogene		13	1	14862000	754
ENSMUSG00000024507	protein_coding	Hsd17b4	ENSMUST00000025385	protein_coding	principal1	18	1	50128201	2684
ENSMUSG00000095366	lincRNA	Gm21860	ENSMUST00000238676	lincRNA		Y	-1	90755467	1181
ENSMUSG00000095366	lincRNA	Gm21860	ENSMUST00000177893	lincRNA		Y	-1	90754821	309
ENSMUSG00000095134	unprocessed_pseudogene	Mid1-ps1	ENSMUST00000167967	unprocessed_pseudogene		Y	1	90753057	1248
ENSMUSG00000106552	unprocessed_pseudogene	Obox4-ps5	ENSMUST00000196368	unprocessed_pseudogene		7	-1	14813664	397
ENSMUSG00000114176	processed_pseudogene	Gm48329	ENSMUST00000221755	processed_pseudogene		13	1	14943144	1145
ENSMUSG00000068882	protein_coding	Ssb	ENSMUST00000090852	protein_coding	principal1	2	1	69861562	2001
ENSMUSG00000054477	protein_coding	Kcnn2	ENSMUST00000183850	protein_coding	principal2	18	1	45269005	3546
ENSMUSG00000034171	protein_coding	Faah	ENSMUST00000125761	retained_intron		4	-1	116017675	2758
ENSMUSG00000024507	protein_coding	Hsd17b4	ENSMUST00000152388	processed_transcript		18	1	50128494	394
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000198529	protein_coding		3	1	33800210	1294
ENSMUSG00000024507	protein_coding	Hsd17b4	ENSMUST00000139502	retained_intron		18	1	50142369	536
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000136379	retained_intron		5	1	144768092	2621
ENSMUSG00000068882	protein_coding	Ssb	ENSMUST00000132186	nonsense_mediated_decay		2	1	69861623	1563
ENSMUSG00000027007	protein_coding	Itprid2	ENSMUST00000111785	protein_coding	principal2	2	1	79635352	5168
ENSMUSG00000068882	protein_coding	Ssb	ENSMUST00000112260	protein_coding		2	1	69861686	634
ENSMUSG00000024507	protein_coding	Hsd17b4	ENSMUST00000127325	retained_intron		18	1	50191324	634
ENSMUSG00000086026	lincRNA	Gm12374	ENSMUST00000147108	lincRNA		4	1	37249403	3299
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000199222	nonsense_mediated_decay		3	1	33800213	2438
ENSMUSG00000098309	unprocessed_pseudogene	Gtpbp4-ps2	ENSMUST00000184058	unprocessed_pseudogene		7	-1	14838029	256
ENSMUSG00000034171	protein_coding	Faah	ENSMUST00000154249	retained_intron		4	-1	116017716	5537
ENSMUSG00000027007	protein_coding	Itprid2	ENSMUST00000111788	protein_coding	alternative2	2	1	79635426	4976
ENSMUSG00000068882	protein_coding	Ssb	ENSMUST00000156057	processed_transcript		2	1	69863291	666
ENSMUSG00000027007	protein_coding	Itprid2	ENSMUST00000111784	protein_coding	alternative2	2	1	79635455	4999
ENSMUSG00000098564	unprocessed_pseudogene	Ranbp2-ps3	ENSMUST00000183549	unprocessed_pseudogene		7	-1	14857340	388
ENSMUSG00000027007	protein_coding	Itprid2	ENSMUST00000124938	processed_transcript		2	1	79635461	686
ENSMUSG00000068882	protein_coding	Ssb	ENSMUST00000132603	protein_coding		2	1	69868779	991
ENSMUSG00000057270	protein_coding	Olfr1501	ENSMUST00000208493	protein_coding	principal1	19	-1	13850692	4230
ENSMUSG00000057270	protein_coding	Olfr1501	ENSMUST00000215350	protein_coding	principal1	19	-1	13850409	4395
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000117915	protein_coding	alternative2	3	1	33800213	4913
ENSMUSG00000057270	protein_coding	Olfr1501	ENSMUST00000073966	protein_coding	principal1	19	-1	13839171	948
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000229576	nonsense_mediated_decay		15	1	66577580	5094
ENSMUSG00000068882	protein_coding	Ssb	ENSMUST00000166411	protein_coding	principal1	2	1	69861562	2088
ENSMUSG00000054477	protein_coding	Kcnn2	ENSMUST00000184101	retained_intron		18	1	45559469	2845
ENSMUSG00000056858	protein_coding	Olfr1502	ENSMUST00000074221	protein_coding	principal1	19	1	13861795	951
ENSMUSG00000054477	protein_coding	Kcnn2	ENSMUST00000183897	retained_intron		18	1	45559811	1970
ENSMUSG00000089902	processed_transcript	Gm13625	ENSMUST00000149283	processed_transcript		2	-1	69872202	480
ENSMUSG00000030659	protein_coding	Nucb2	ENSMUST00000032895	protein_coding	principal2	7	1	116504369	1685
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000108210	protein_coding	alternative2	3	1	33800251	2684
ENSMUSG00000109937	processed_pseudogene	Gm45247	ENSMUST00000210757	processed_pseudogene		8	1	97344676	309
ENSMUSG00000081111	processed_pseudogene	Gm5913	ENSMUST00000119397	processed_pseudogene		8	-1	97429110	1399
ENSMUSG00000027007	protein_coding	Itprid2	ENSMUST00000133266	processed_transcript		2	1	79639182	4804
ENSMUSG00000110156	antisense	Gm42067	ENSMUST00000209642	antisense		19	1	5912822	647
ENSMUSG00000058078	unprocessed_pseudogene	Olfr1503-ps1	ENSMUST00000076614	unprocessed_pseudogene		19	1	13877451	803
ENSMUSG00000098116	processed_pseudogene	Gm7191	ENSMUST00000182678	processed_pseudogene		8	-1	97566592	990
ENSMUSG00000109615	lincRNA	Gm39231	ENSMUST00000209813	lincRNA		8	1	97840048	501
ENSMUSG00000109645	processed_pseudogene	Gm45246	ENSMUST00000210820	processed_pseudogene		8	1	97876154	367
ENSMUSG00000110156	antisense	Gm42067	ENSMUST00000210917	antisense		19	1	5912953	410
ENSMUSG00000110476	lincRNA	4930422C21Rik	ENSMUST00000212419	lincRNA		8	-1	116187369	2362
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000196975	protein_coding	alternative2	3	1	33800263	1711
ENSMUSG00000109681	processed_pseudogene	Gm17997	ENSMUST00000211801	processed_pseudogene		8	-1	98197515	840
ENSMUSG00000110156	antisense	Gm42067	ENSMUST00000235359	antisense		19	1	5912987	1843
ENSMUSG00000030659	protein_coding	Nucb2	ENSMUST00000182767	processed_transcript		7	1	116504384	329
ENSMUSG00000001376	protein_coding	Vps50	ENSMUST00000001412	protein_coding	principal1	6	1	3498382	3788
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000196369	nonsense_mediated_decay		3	1	33801214	1666
ENSMUSG00000110194	processed_pseudogene	Gm7192	ENSMUST00000210793	processed_pseudogene		8	-1	98224663	1137
ENSMUSG00000030659	protein_coding	Nucb2	ENSMUST00000183175	protein_coding	alternative1	7	1	116504415	1913
ENSMUSG00000027677	protein_coding	Ttc14	ENSMUST00000197592	retained_intron		3	1	33802540	445
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000128550	protein_coding		5	1	144768544	415
ENSMUSG00000110011	processed_pseudogene	Gm29817	ENSMUST00000210098	processed_pseudogene		8	-1	98878897	172
ENSMUSG00000054477	protein_coding	Kcnn2	ENSMUST00000167895	processed_transcript		18	1	45560154	1347
ENSMUSG00000030659	protein_coding	Nucb2	ENSMUST00000183335	nonsense_mediated_decay		7	1	116528812	563
ENSMUSG00000054477	protein_coding	Kcnn2	ENSMUST00000211323	protein_coding	principal2	18	1	45560154	1725
ENSMUSG00000029268	protein_coding	Ugt2a2	ENSMUST00000079811	protein_coding	principal1	5	-1	87482258	2539
ENSMUSG00000047454	protein_coding	Gphn	ENSMUST00000052472	protein_coding		12	1	78226379	3570
ENSMUSG00000054477	protein_coding	Kcnn2	ENSMUST00000235217	processed_transcript		18	1	45574620	476
ENSMUSG00000001376	protein_coding	Vps50	ENSMUST00000170873	protein_coding		6	1	3498404	3687
ENSMUSG00000054477	protein_coding	Kcnn2	ENSMUST00000236405	protein_coding		18	1	45655253	389
ENSMUSG00000029268	protein_coding	Ugt2a2	ENSMUST00000144144	protein_coding		5	-1	87482260	929
ENSMUSG00000106729	TEC	Gm43165	ENSMUST00000200842	TEC		5	-1	131042970	1635
ENSMUSG00000107207	TEC	Gm42897	ENSMUST00000201486	TEC		5	-1	130898613	2112
ENSMUSG00000107295	TEC	Gm42896	ENSMUST00000201249	TEC		5	-1	130960035	1113
ENSMUSG00000058298	protein_coding	Mcm9	ENSMUST00000237608	protein_coding	alternative2	10	-1	53630439	4882
ENSMUSG00000047454	protein_coding	Gphn	ENSMUST00000110388	protein_coding	principal1	12	1	78226653	3300
ENSMUSG00000001376	protein_coding	Vps50	ENSMUST00000164052	protein_coding		6	1	3498422	4824
ENSMUSG00000054477	protein_coding	Kcnn2	ENSMUST00000066890	protein_coding	alternative2	18	1	45269005	3682
ENSMUSG00000047454	protein_coding	Gphn	ENSMUST00000219629	retained_intron		12	1	78682647	484
ENSMUSG00000112302	bidirectional_promoter_lncRNA	Gm48226	ENSMUST00000219034	bidirectional_promoter_lncRNA		12	-1	78226525	4240
ENSMUSG00000001376	protein_coding	Vps50	ENSMUST00000184780	retained_intron		6	1	3498426	1587
ENSMUSG00000054477	protein_coding	Kcnn2	ENSMUST00000169783	protein_coding		18	1	45560154	1625
ENSMUSG00000024474	protein_coding	Ik	ENSMUST00000235165	retained_intron		18	1	36744678	2349
ENSMUSG00000030735	processed_pseudogene	Gm9755	ENSMUST00000032981	processed_pseudogene		8	-1	67515590	1356
ENSMUSG00000073569	processed_pseudogene	Gm10540	ENSMUST00000097581	processed_pseudogene		18	-1	45286120	285
ENSMUSG00000058298	protein_coding	Mcm9	ENSMUST00000219547	protein_coding		10	-1	53593161	3168
ENSMUSG00000001376	protein_coding	Vps50	ENSMUST00000183935	processed_transcript		6	1	3517812	493
ENSMUSG00000058298	protein_coding	Mcm9	ENSMUST00000220007	protein_coding		10	-1	53597648	3513
ENSMUSG00000058298	protein_coding	Mcm9	ENSMUST00000220260	processed_transcript		10	-1	53597047	464
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000048188	protein_coding	alternative2	15	1	66577580	6665
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000230948	protein_coding	alternative2	15	1	66577580	6584
ENSMUSG00000058298	protein_coding	Mcm9	ENSMUST00000218549	protein_coding		10	-1	53629959	2421
ENSMUSG00000031028	protein_coding	Tub	ENSMUST00000033341	protein_coding	principal1	7	1	109010825	5997
ENSMUSG00000052479	lincRNA	A330008L17Rik	ENSMUST00000064349	lincRNA		8	1	99416642	3220
ENSMUSG00000098284	antisense	A330093E20Rik	ENSMUST00000184994	antisense		18	-1	45896509	2327
ENSMUSG00000056426	protein_coding	Nat3	ENSMUST00000070514	protein_coding	principal1	8	1	67523854	1395
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000229160	protein_coding	principal2	15	1	66577580	9383
ENSMUSG00000058298	protein_coding	Mcm9	ENSMUST00000219841	protein_coding		10	-1	53612952	307
ENSMUSG00000058298	protein_coding	Mcm9	ENSMUST00000219838	protein_coding		10	-1	53630439	4132
ENSMUSG00000024474	protein_coding	Ik	ENSMUST00000224284	processed_transcript		18	1	36744692	1955
ENSMUSG00000106677	protein_coding	Ugt2a1	ENSMUST00000147854	protein_coding	principal1	5	-1	87490871	2570
ENSMUSG00000052479	lincRNA	A330008L17Rik	ENSMUST00000153366	lincRNA		8	1	99416674	2614
ENSMUSG00000110452	processed_pseudogene	Gm36247	ENSMUST00000211834	processed_pseudogene		8	-1	67585190	285
ENSMUSG00000109775	TEC	Gm45297	ENSMUST00000209893	TEC		8	-1	99049409	3483
ENSMUSG00000027867	protein_coding	Spag17	ENSMUST00000164539	protein_coding	principal1	3	1	99885417	7862
ENSMUSG00000024474	protein_coding	Ik	ENSMUST00000236760	retained_intron		18	1	36744695	2872
ENSMUSG00000114363	processed_pseudogene	Gm48174	ENSMUST00000225562	processed_pseudogene		13	1	57239847	409
ENSMUSG00000031028	protein_coding	Tub	ENSMUST00000119474	protein_coding		7	1	109017542	2097
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000229590	retained_intron		15	1	66577605	4174
ENSMUSG00000024474	protein_coding	Ik	ENSMUST00000235721	retained_intron		18	1	36744722	1173
ENSMUSG00000031028	protein_coding	Tub	ENSMUST00000147943	retained_intron		7	1	109027223	747
ENSMUSG00000089819	antisense	Gm15679	ENSMUST00000161244	antisense		8	1	99011886	1936
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000115519	protein_coding	alternative2	6	-1	8778154	1706
ENSMUSG00000058298	protein_coding	Mcm9	ENSMUST00000075540	protein_coding	principal2	10	-1	53630439	4868
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000230584	retained_intron		15	1	66604162	500
ENSMUSG00000024474	protein_coding	Ik	ENSMUST00000237774	retained_intron		18	1	36744758	458
ENSMUSG00000098284	antisense	A330093E20Rik	ENSMUST00000184346	antisense		18	-1	45857372	756
ENSMUSG00000107180	protein_coding	Gm43638	ENSMUST00000201519	protein_coding	principal1	5	-1	87486806	2297
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000112847	protein_coding	principal3	5	-1	103211334	7196
ENSMUSG00000083586	unprocessed_pseudogene	Gm8688	ENSMUST00000118240	unprocessed_pseudogene		8	1	99664019	969
ENSMUSG00000113760	lincRNA	Gm48222	ENSMUST00000221828	lincRNA		13	1	66032209	569
ENSMUSG00000112530	antisense	Gm47738	ENSMUST00000218795	antisense		10	1	53569669	1861
ENSMUSG00000112634	TEC	Gm47737	ENSMUST00000218476	TEC		10	-1	53593124	308
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000229486	retained_intron		15	1	66614094	1752
ENSMUSG00000098284	antisense	A330093E20Rik	ENSMUST00000237850	antisense		18	-1	46045260	701
ENSMUSG00000112332	TEC	4930466K18Rik	ENSMUST00000219458	TEC		10	1	53614369	906
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000238446	protein_coding		5	-1	103211334	7196
ENSMUSG00000098284	antisense	A330093E20Rik	ENSMUST00000236654	antisense		18	-1	45857356	681
ENSMUSG00000024474	protein_coding	Ik	ENSMUST00000237095	protein_coding		18	1	36744760	466
ENSMUSG00000027676	protein_coding	Ccdc39	ENSMUST00000029222	protein_coding	principal1	3	-1	33844301	3606
ENSMUSG00000098284	antisense	A330093E20Rik	ENSMUST00000238177	antisense		18	-1	45857372	413
ENSMUSG00000117844	processed_pseudogene	Gm18652	ENSMUST00000235439	processed_pseudogene		18	-1	45419153	565
ENSMUSG00000095909	protein_coding	Gm10324	ENSMUST00000238355	protein_coding		13	1	66113480	449
ENSMUSG00000095909	protein_coding	Gm10324	ENSMUST00000238623	protein_coding		13	1	66113480	1525
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000230250	retained_intron		15	1	66614631	3933
ENSMUSG00000095909	protein_coding	Gm10324	ENSMUST00000092528	protein_coding	principal1	13	1	66119547	1815
ENSMUSG00000001376	protein_coding	Vps50	ENSMUST00000184461	retained_intron		6	1	3558977	5361
ENSMUSG00000118074	transcribed_processed_pseudogene	Gm31907	ENSMUST00000236115	processed_transcript		18	-1	45560130	1371
ENSMUSG00000048330	protein_coding	Ric3	ENSMUST00000147580	nonsense_mediated_decay		7	-1	109057824	5016
ENSMUSG00000118074	transcribed_processed_pseudogene	Gm31907	ENSMUST00000235309	transcribed_processed_pseudogene		18	-1	45506388	450
ENSMUSG00000118427	lincRNA	Gm50489	ENSMUST00000238686	lincRNA		13	-1	66129693	650
ENSMUSG00000024474	protein_coding	Ik	ENSMUST00000235693	retained_intron		18	1	36748488	601
ENSMUSG00000001376	protein_coding	Vps50	ENSMUST00000183532	processed_transcript		6	1	3570694	1786
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000229033	processed_transcript		15	1	66629910	796
ENSMUSG00000118037	processed_pseudogene	Gm50125	ENSMUST00000237088	processed_pseudogene		18	1	45714584	487
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000141573	nonsense_mediated_decay		5	-1	103205929	1502
ENSMUSG00000024474	protein_coding	Ik	ENSMUST00000237809	retained_intron		18	1	36752355	304
ENSMUSG00000113477	processed_pseudogene	Gm45965	ENSMUST00000221192	processed_pseudogene		13	1	66163779	1284
ENSMUSG00000001376	protein_coding	Vps50	ENSMUST00000184959	retained_intron		6	1	3588051	667
ENSMUSG00000027676	protein_coding	Ccdc39	ENSMUST00000200536	retained_intron		3	-1	33814551	423
ENSMUSG00000001376	protein_coding	Vps50	ENSMUST00000184411	processed_transcript		6	1	3594018	391
ENSMUSG00000072501	protein_coding	Phf20l1	ENSMUST00000231177	processed_transcript		15	1	66630888	664
ENSMUSG00000113156	lincRNA	Gm48223	ENSMUST00000222837	lincRNA		13	1	66177347	306
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000112846	protein_coding		5	-1	103211273	2617
ENSMUSG00000107094	TEC	Gm43294	ENSMUST00000202850	TEC		6	1	3583814	2490
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000115520	protein_coding	principal2	6	-1	8778439	1876
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000128869	protein_coding		5	-1	103026995	2518
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000133069	protein_coding		5	-1	103211334	2732
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000038403	protein_coding	principal2	6	-1	8778484	2075
ENSMUSG00000030726	protein_coding	Pold3	ENSMUST00000032969	protein_coding	principal1	7	-1	100121565	3069
ENSMUSG00000019857	protein_coding	Asf1a	ENSMUST00000219271	protein_coding		10	1	53596757	725
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000152609	processed_transcript		5	-1	103211284	968
ENSMUSG00000086268	antisense	Gm11670	ENSMUST00000143435	antisense		11	-1	108942015	511
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000149147	protein_coding		11	-1	116359081	3873
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000142444	processed_transcript		5	-1	103209012	265
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000145870	processed_transcript		6	-1	8647819	470
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000153390	protein_coding		6	-1	8778154	1138
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000127398	protein_coding		6	-1	8672317	226
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000135134	processed_transcript		5	-1	103211334	342
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000136595	processed_transcript		5	-1	103210871	300
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000115518	protein_coding		6	-1	8778487	1256
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000126430	protein_coding		6	-1	8737097	565
ENSMUSG00000046709	protein_coding	Mapk10	ENSMUST00000170792	protein_coding	principal3	5	-1	103211334	7198
ENSMUSG00000027867	protein_coding	Spag17	ENSMUST00000152586	retained_intron		3	1	100022570	678
ENSMUSG00000106654	processed_pseudogene	Gm2623	ENSMUST00000199229	processed_pseudogene		5	1	32838129	286
ENSMUSG00000027867	protein_coding	Spag17	ENSMUST00000143050	retained_intron		3	1	100027608	674
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000135113	processed_transcript		6	-1	8778488	960
ENSMUSG00000105647	processed_transcript	Gm43695	ENSMUST00000196545	processed_transcript		5	-1	32739334	196
ENSMUSG00000019857	protein_coding	Asf1a	ENSMUST00000020004	protein_coding	principal1	10	1	53596952	2201
ENSMUSG00000105429	TEC	Gm43692	ENSMUST00000198236	TEC		5	-1	32800965	1062
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000126039	protein_coding		6	-1	8770540	404
ENSMUSG00000030726	protein_coding	Pold3	ENSMUST00000127128	nonsense_mediated_decay		7	-1	100121455	1574
ENSMUSG00000062995	protein_coding	Ica1	ENSMUST00000151758	protein_coding		6	-1	8778123	441
ENSMUSG00000030726	protein_coding	Pold3	ENSMUST00000208704	processed_transcript		7	-1	100101460	1341
ENSMUSG00000024474	protein_coding	Ik	ENSMUST00000007042	protein_coding	principal1	18	1	36744656	1996
ENSMUSG00000038225	protein_coding	Primpol	ENSMUST00000211400	nonsense_mediated_decay		8	-1	46617200	3797
ENSMUSG00000019857	protein_coding	Asf1a	ENSMUST00000218043	retained_intron		10	1	53597255	735
ENSMUSG00000026463	protein_coding	Atp2b4	ENSMUST00000143567	protein_coding	principal3	1	-1	133801041	11725
ENSMUSG00000083997	processed_pseudogene	Gm12920	ENSMUST00000121818	processed_pseudogene		4	1	10813543	1186
ENSMUSG00000019857	protein_coding	Asf1a	ENSMUST00000219533	retained_intron		10	1	53597452	955
ENSMUSG00000019857	protein_coding	Asf1a	ENSMUST00000219282	protein_coding		10	1	53597757	1150
ENSMUSG00000027676	protein_coding	Ccdc39	ENSMUST00000200300	retained_intron		3	-1	33844301	2630
ENSMUSG00000019857	protein_coding	Asf1a	ENSMUST00000218025	protein_coding		10	1	53602348	484
ENSMUSG00000066315	processed_pseudogene	Gm12918	ENSMUST00000120234	processed_pseudogene		4	1	10848420	636
ENSMUSG00000114778	processed_pseudogene	Gm9634	ENSMUST00000223622	processed_pseudogene		13	-1	77554373	764
ENSMUSG00000030726	protein_coding	Pold3	ENSMUST00000208670	protein_coding		7	-1	100121466	1716
ENSMUSG00000038225	protein_coding	Primpol	ENSMUST00000136335	nonsense_mediated_decay		8	-1	46617200	3943
ENSMUSG00000109614	processed_pseudogene	Gm45252	ENSMUST00000211579	processed_pseudogene		8	1	31003908	397
ENSMUSG00000034171	protein_coding	Faah	ENSMUST00000049095	protein_coding	principal1	4	-1	116017926	3827
ENSMUSG00000027676	protein_coding	Ccdc39	ENSMUST00000200277	retained_intron		3	-1	33844075	2745
ENSMUSG00000026463	protein_coding	Atp2b4	ENSMUST00000125659	protein_coding	alternative2	1	-1	133753681	4579
ENSMUSG00000104345	lincRNA	Gm37690	ENSMUST00000192684	lincRNA		Y	-1	21894794	1497
ENSMUSG00000038225	protein_coding	Primpol	ENSMUST00000209787	protein_coding	principal1	8	-1	46617208	1833
ENSMUSG00000003282	protein_coding	Plag1	ENSMUST00000003369	protein_coding	principal1	4	-1	3938382	4774
ENSMUSG00000030726	protein_coding	Pold3	ENSMUST00000130413	retained_intron		7	-1	100093664	748
ENSMUSG00000026463	protein_coding	Atp2b4	ENSMUST00000112264	protein_coding	alternative2	1	-1	133753281	3324
ENSMUSG00000027676	protein_coding	Ccdc39	ENSMUST00000200551	retained_intron		3	-1	33826540	1056
ENSMUSG00000085223	lincRNA	Gm11210	ENSMUST00000150203	lincRNA		4	1	62705981	422
ENSMUSG00000034171	protein_coding	Faah	ENSMUST00000150668	retained_intron		4	-1	116017727	2802
ENSMUSG00000038225	protein_coding	Primpol	ENSMUST00000123328	nonsense_mediated_decay		8	-1	46592613	273
ENSMUSG00000030726	protein_coding	Pold3	ENSMUST00000156518	retained_intron		7	-1	100090037	658
ENSMUSG00000026463	protein_coding	Atp2b4	ENSMUST00000140810	retained_intron		1	-1	133717929	432
ENSMUSG00000030726	protein_coding	Pold3	ENSMUST00000208184	protein_coding		7	-1	100121078	1329
ENSMUSG00000027676	protein_coding	Ccdc39	ENSMUST00000197230	retained_intron		3	-1	33844310	1557
ENSMUSG00000034171	protein_coding	Faah	ENSMUST00000133225	retained_intron		4	-1	116000068	790
ENSMUSG00000086139	lincRNA	Gm11211	ENSMUST00000143618	lincRNA		4	-1	62727537	359
ENSMUSG00000030726	protein_coding	Pold3	ENSMUST00000123675	retained_intron		7	-1	100100606	487
ENSMUSG00000038225	protein_coding	Primpol	ENSMUST00000125319	protein_coding		8	-1	46613015	482
ENSMUSG00000034171	protein_coding	Faah	ENSMUST00000156126	retained_intron		4	-1	115999937	692
ENSMUSG00000104345	lincRNA	Gm37690	ENSMUST00000193211	lincRNA		Y	-1	21894341	616
ENSMUSG00000104345	lincRNA	Gm37690	ENSMUST00000192398	lincRNA		Y	-1	21894341	432
ENSMUSG00000034171	protein_coding	Faah	ENSMUST00000143724	processed_transcript		4	-1	116017675	1926
ENSMUSG00000003282	protein_coding	Plag1	ENSMUST00000137439	nonsense_mediated_decay		4	-1	3938405	452
ENSMUSG00000030726	protein_coding	Pold3	ENSMUST00000129556	retained_intron		7	-1	100100479	620
ENSMUSG00000082048	processed_pseudogene	Gm11481	ENSMUST00000120069	processed_pseudogene		4	1	62939521	255
ENSMUSG00000034171	protein_coding	Faah	ENSMUST00000150614	processed_transcript		4	-1	116017697	404
ENSMUSG00000109414	lincRNA	4930505K13Rik	ENSMUST00000208641	lincRNA		7	1	120156115	546
ENSMUSG00000038225	protein_coding	Primpol	ENSMUST00000210264	protein_coding		8	-1	46617182	346
ENSMUSG00000028910	protein_coding	Mecr	ENSMUST00000030742	protein_coding	principal1	4	1	131843470	1337
ENSMUSG00000026463	protein_coding	Atp2b4	ENSMUST00000128692	processed_transcript		1	-1	133801036	588
ENSMUSG00000083635	processed_pseudogene	Gm11480	ENSMUST00000120214	processed_pseudogene		4	1	62939912	659
ENSMUSG00000048330	protein_coding	Ric3	ENSMUST00000055993	protein_coding	principal3	7	-1	109083331	5281
ENSMUSG00000030726	protein_coding	Pold3	ENSMUST00000156202	nonsense_mediated_decay		7	-1	100121458	607
ENSMUSG00000097920	processed_pseudogene	Gm7784	ENSMUST00000180769	processed_pseudogene		1	1	23479539	989
ENSMUSG00000003282	protein_coding	Plag1	ENSMUST00000151543	nonsense_mediated_decay		4	-1	3938423	669
ENSMUSG00000028910	protein_coding	Mecr	ENSMUST00000137321	protein_coding		4	1	131843493	765
ENSMUSG00000038225	protein_coding	Primpol	ENSMUST00000132472	retained_intron		8	-1	46617212	1748
ENSMUSG00000107765	unprocessed_pseudogene	Gm34224	ENSMUST00000204606	unprocessed_pseudogene		6	1	133597285	364
ENSMUSG00000003282	protein_coding	Plag1	ENSMUST00000147035	retained_intron		4	-1	3938393	4049
ENSMUSG00000028715	protein_coding	Cyp4a14	ENSMUST00000030487	protein_coding	principal1	4	-1	115496142	2496
ENSMUSG00000107565	unprocessed_pseudogene	Gm34314	ENSMUST00000203622	unprocessed_pseudogene		6	-1	133619197	367
ENSMUSG00000028910	protein_coding	Mecr	ENSMUST00000139573	processed_transcript		4	1	131843505	387
ENSMUSG00000048330	protein_coding	Ric3	ENSMUST00000120876	protein_coding	alternative1	7	-1	109083322	1633
ENSMUSG00000038225	protein_coding	Primpol	ENSMUST00000040468	protein_coding	principal1	8	-1	46617200	3772
ENSMUSG00000028715	protein_coding	Cyp4a14	ENSMUST00000124412	processed_transcript		4	-1	115496140	505
ENSMUSG00000113350	transcribed_unprocessed_pseudogene	Vmn2r-ps102	ENSMUST00000222739	processed_transcript		13	1	66192322	604
ENSMUSG00000113350	transcribed_unprocessed_pseudogene	Vmn2r-ps102	ENSMUST00000222577	transcribed_unprocessed_pseudogene		13	1	66192338	2023
ENSMUSG00000028910	protein_coding	Mecr	ENSMUST00000142386	processed_transcript		4	1	131853686	642
ENSMUSG00000113350	transcribed_unprocessed_pseudogene	Vmn2r-ps102	ENSMUST00000222605	processed_transcript		13	1	66193683	767
ENSMUSG00000026463	protein_coding	Atp2b4	ENSMUST00000048953	protein_coding	alternative2	1	-1	133753747	8292
ENSMUSG00000028910	protein_coding	Mecr	ENSMUST00000128116	processed_transcript		4	1	131853745	616
ENSMUSG00000048330	protein_coding	Ric3	ENSMUST00000133876	retained_intron		7	-1	109083311	3258
ENSMUSG00000109653	processed_pseudogene	Gm45608	ENSMUST00000210948	processed_pseudogene		8	-1	84303733	389
ENSMUSG00000113713	processed_pseudogene	Gm48240	ENSMUST00000221245	processed_pseudogene		13	-1	66222470	1093
ENSMUSG00000048330	protein_coding	Ric3	ENSMUST00000137385	retained_intron		7	-1	109083322	683
ENSMUSG00000030909	protein_coding	Anks4b	ENSMUST00000033201	protein_coding	principal1	7	1	120173858	3900
ENSMUSG00000113253	processed_pseudogene	Gm48241	ENSMUST00000222795	processed_pseudogene		13	1	66240777	153
ENSMUSG00000048330	protein_coding	Ric3	ENSMUST00000129629	processed_transcript		7	-1	109083305	469
ENSMUSG00000026463	protein_coding	Atp2b4	ENSMUST00000165602	protein_coding	principal3	1	-1	133753747	8101
ENSMUSG00000111544	lincRNA	4930534H03Rik	ENSMUST00000216311	lincRNA		10	-1	91220642	1669
ENSMUSG00000026463	protein_coding	Atp2b4	ENSMUST00000167348	protein_coding		1	-1	133701881	243
ENSMUSG00000009185	protein_coding	Ccl8	ENSMUST00000009329	protein_coding	principal1	11	1	82115185	511
ENSMUSG00000102509	TEC	Gm37368	ENSMUST00000193173	TEC		1	-1	133778421	3212
ENSMUSG00000111544	lincRNA	4930534H03Rik	ENSMUST00000216451	lincRNA		10	-1	91220619	661
ENSMUSG00000115120	lincRNA	4930425P05Rik	ENSMUST00000226278	lincRNA		14	-1	32013002	862
ENSMUSG00000107635	TEC	Gm44247	ENSMUST00000203875	TEC		6	1	133706870	277
ENSMUSG00000108241	processed_pseudogene	Gm44252	ENSMUST00000204187	processed_pseudogene		6	-1	133732378	330
ENSMUSG00000073242	antisense	Dnmt3aos	ENSMUST00000144896	antisense		12	-1	3862244	1385
ENSMUSG00000047126	protein_coding	Cltc	ENSMUST00000103186	protein_coding	principal1	11	-1	86757565	6519
ENSMUSG00000111936	lincRNA	Gm47540	ENSMUST00000219469	lincRNA		10	1	128595615	2917
ENSMUSG00000107950	processed_pseudogene	Gm6375	ENSMUST00000205201	processed_pseudogene		6	-1	133763062	1145
ENSMUSG00000112068	processed_pseudogene	Gm9182	ENSMUST00000217829	processed_pseudogene		10	1	128615401	639
ENSMUSG00000047126	protein_coding	Cltc	ENSMUST00000060766	protein_coding		11	-1	86757501	6163
ENSMUSG00000047126	protein_coding	Cltc	ENSMUST00000124385	protein_coding		11	-1	86703697	898
ENSMUSG00000039661	protein_coding	Dusp26	ENSMUST00000036631	protein_coding	principal1	8	1	31089471	1938
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000173700	retained_intron		12	1	3806007	4014
ENSMUSG00000074832	protein_coding	2410141K09Rik	ENSMUST00000173583	protein_coding		13	-1	66441118	515
ENSMUSG00000025362	protein_coding	Rps26	ENSMUST00000219591	retained_intron		10	-1	128626424	596
ENSMUSG00000047126	protein_coding	Cltc	ENSMUST00000134999	processed_transcript		11	-1	86702430	366
ENSMUSG00000034040	protein_coding	Galnt17	ENSMUST00000086023	protein_coding	principal1	5	-1	131308497	8040
ENSMUSG00000074832	protein_coding	2410141K09Rik	ENSMUST00000172688	protein_coding		13	-1	66419597	526
ENSMUSG00000047126	protein_coding	Cltc	ENSMUST00000141152	retained_intron		11	-1	86726483	2223
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000129488	protein_coding		13	1	14063784	1802
ENSMUSG00000074832	protein_coding	2410141K09Rik	ENSMUST00000172579	protein_coding	principal1	13	-1	66441078	2587
ENSMUSG00000039661	protein_coding	Dusp26	ENSMUST00000170204	protein_coding	principal1	8	1	31089638	1627
ENSMUSG00000028910	protein_coding	Mecr	ENSMUST00000145045	processed_transcript		4	1	131857737	582
ENSMUSG00000074832	protein_coding	2410141K09Rik	ENSMUST00000091541	protein_coding		13	-1	66433895	288
ENSMUSG00000047126	protein_coding	Cltc	ENSMUST00000133501	processed_transcript		11	-1	86726452	529
ENSMUSG00000114629	processed_pseudogene	Gm48244	ENSMUST00000224269	processed_pseudogene		13	-1	66397532	981
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000085826	retained_intron		12	1	3806498	1944
ENSMUSG00000039661	protein_coding	Dusp26	ENSMUST00000162551	retained_intron		8	1	31089804	663
ENSMUSG00000034040	protein_coding	Galnt17	ENSMUST00000160609	protein_coding		5	-1	131308076	2875
ENSMUSG00000025362	protein_coding	Rps26	ENSMUST00000026420	protein_coding	principal1	10	-1	128626747	681
ENSMUSG00000025362	protein_coding	Rps26	ENSMUST00000219773	retained_intron		10	-1	128626524	903
ENSMUSG00000039661	protein_coding	Dusp26	ENSMUST00000161713	protein_coding	principal1	8	1	31091650	1524
ENSMUSG00000034040	protein_coding	Galnt17	ENSMUST00000160807	retained_intron		5	-1	131306915	1704
ENSMUSG00000034040	protein_coding	Galnt17	ENSMUST00000161228	retained_intron		5	-1	131307873	2119
ENSMUSG00000039661	protein_coding	Dusp26	ENSMUST00000160700	retained_intron		8	1	31094008	698
ENSMUSG00000094499	transcribed_unprocessed_pseudogene	Vmn2r-ps104	ENSMUST00000234850	processed_transcript		13	-1	66401873	3029
ENSMUSG00000034040	protein_coding	Galnt17	ENSMUST00000162966	processed_transcript		5	-1	131308078	731
ENSMUSG00000028910	protein_coding	Mecr	ENSMUST00000127735	processed_transcript		4	1	131857763	948
ENSMUSG00000028910	protein_coding	Mecr	ENSMUST00000143067	processed_transcript		4	1	131860233	826
ENSMUSG00000094499	transcribed_unprocessed_pseudogene	Vmn2r-ps104	ENSMUST00000099416	transcribed_unprocessed_pseudogene		13	-1	66356747	1671
ENSMUSG00000114729	processed_pseudogene	C330022B21Rik	ENSMUST00000224620	processed_pseudogene		13	-1	66342935	2350
ENSMUSG00000106710	sense_intronic	Gm43166	ENSMUST00000202871	sense_intronic		5	-1	131134711	4379
ENSMUSG00000028910	protein_coding	Mecr	ENSMUST00000137412	processed_transcript		4	1	131861710	532
ENSMUSG00000114377	processed_pseudogene	Gm48247	ENSMUST00000224771	processed_pseudogene		13	-1	66393323	196
ENSMUSG00000114239	processed_pseudogene	Gm48245	ENSMUST00000225908	processed_pseudogene		13	-1	66280057	139
ENSMUSG00000114550	processed_pseudogene	Gm46426	ENSMUST00000224096	processed_pseudogene		13	-1	66284067	1567
ENSMUSG00000114825	processed_pseudogene	Gm19119	ENSMUST00000224565	processed_pseudogene		13	1	66398531	725
ENSMUSG00000028910	protein_coding	Mecr	ENSMUST00000128607	processed_transcript		4	1	131864778	743
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000100202	protein_coding	principal2	11	-1	116413004	4619
ENSMUSG00000114027	unprocessed_pseudogene	Vmn2r-ps103	ENSMUST00000222960	unprocessed_pseudogene		13	-1	66255539	2349
ENSMUSG00000114776	processed_pseudogene	Gm18260	ENSMUST00000224087	processed_pseudogene		13	-1	66309296	993
ENSMUSG00000114328	processed_pseudogene	Gm48246	ENSMUST00000224794	processed_pseudogene		13	-1	66334879	198
ENSMUSG00000114261	processed_pseudogene	Gm48243	ENSMUST00000224573	processed_pseudogene		13	1	66412482	376
ENSMUSG00000114616	lincRNA	Gm26754	ENSMUST00000224041	lincRNA		13	1	66244270	463
ENSMUSG00000114616	lincRNA	Gm26754	ENSMUST00000225647	lincRNA		13	1	66244270	360
ENSMUSG00000000142	protein_coding	Axin2	ENSMUST00000052915	protein_coding	principal2	11	1	108920349	4260
ENSMUSG00000110709	lincRNA	1700018P08Rik	ENSMUST00000212522	lincRNA		8	1	116357061	1239
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000106398	protein_coding	alternative2	11	-1	116413004	4553
ENSMUSG00000110700	processed_pseudogene	Gm5357	ENSMUST00000212720	processed_pseudogene		8	1	116489186	1924
ENSMUSG00000071252	protein_coding	2210408I21Rik	ENSMUST00000168779	protein_coding	principal1	13	1	77135540	5051
ENSMUSG00000024826	protein_coding	Dpf2	ENSMUST00000136983	protein_coding	principal3	19	-1	5912871	3314
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000137264	processed_transcript		11	-1	116347444	751
ENSMUSG00000000142	protein_coding	Axin2	ENSMUST00000140821	protein_coding		11	1	108920800	826
ENSMUSG00000000142	protein_coding	Axin2	ENSMUST00000152909	protein_coding		11	1	108921336	477
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000150775	protein_coding		11	-1	116347918	925
ENSMUSG00000071252	protein_coding	2210408I21Rik	ENSMUST00000225960	nonsense_mediated_decay		13	1	77135551	522
ENSMUSG00000019942	protein_coding	Cdk1	ENSMUST00000020099	protein_coding	principal1	10	-1	69352938	4375
ENSMUSG00000069049	protein_coding	Eif2s3y	ENSMUST00000091197	protein_coding	principal1	Y	1	1010543	1836
ENSMUSG00000073940	protein_coding	Hbb-bt	ENSMUST00000098192	protein_coding	principal1	7	-1	103813996	703
ENSMUSG00000000142	protein_coding	Axin2	ENSMUST00000144511	protein_coding		11	1	108921648	692
ENSMUSG00000024826	protein_coding	Dpf2	ENSMUST00000025746	nonsense_mediated_decay		19	-1	5907059	2153
ENSMUSG00000000142	protein_coding	Axin2	ENSMUST00000106711	protein_coding	alternative2	11	1	108923181	2551
ENSMUSG00000019942	protein_coding	Cdk1	ENSMUST00000119827	protein_coding	principal1	10	-1	69352903	1253
ENSMUSG00000071252	protein_coding	2210408I21Rik	ENSMUST00000225992	retained_intron		13	1	77135551	616
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000141229	processed_transcript		11	-1	116359505	2265
ENSMUSG00000034467	protein_coding	Dynlrb2	ENSMUST00000213007	protein_coding		8	1	116504974	527
ENSMUSG00000028738	protein_coding	Tas1r2	ENSMUST00000030510	protein_coding	principal1	4	1	139653538	3047
ENSMUSG00000029221	protein_coding	Slc30a9	ENSMUST00000113676	protein_coding	alternative2	5	1	67306955	5648
ENSMUSG00000000142	protein_coding	Axin2	ENSMUST00000144130	processed_transcript		11	1	108938874	1051
ENSMUSG00000024826	protein_coding	Dpf2	ENSMUST00000236970	protein_coding		19	-1	5907072	2217
ENSMUSG00000052776	protein_coding	Oas1a	ENSMUST00000080322	protein_coding	principal1	5	-1	120907521	1885
ENSMUSG00000019942	protein_coding	Cdk1	ENSMUST00000123458	retained_intron		10	-1	69342729	378
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000148763	processed_transcript		11	-1	116355469	535
ENSMUSG00000000142	protein_coding	Axin2	ENSMUST00000139682	processed_transcript		11	1	108943621	2045
ENSMUSG00000034467	protein_coding	Dynlrb2	ENSMUST00000078170	protein_coding	principal1	8	1	116505015	515
ENSMUSG00000043535	protein_coding	Setx	ENSMUST00000129544	protein_coding		2	1	29124181	525
ENSMUSG00000030834	protein_coding	Abcc6	ENSMUST00000211220	protein_coding		7	-1	45980006	659
ENSMUSG00000071252	protein_coding	2210408I21Rik	ENSMUST00000225605	protein_coding		13	1	77135554	1539
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000137083	processed_transcript		11	-1	116359307	1414
ENSMUSG00000030834	protein_coding	Abcc6	ENSMUST00000210962	processed_transcript		7	-1	45973319	257
ENSMUSG00000028738	protein_coding	Tas1r2	ENSMUST00000166773	protein_coding		4	1	139653549	2524
ENSMUSG00000071252	protein_coding	2210408I21Rik	ENSMUST00000225760	protein_coding		13	1	77193034	594
ENSMUSG00000019942	protein_coding	Cdk1	ENSMUST00000129444	retained_intron		10	-1	69345510	770
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000129202	processed_transcript		11	-1	116360012	258
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000142779	protein_coding		5	-1	32785585	2008
ENSMUSG00000024826	protein_coding	Dpf2	ENSMUST00000118623	protein_coding	alternative1	19	-1	5912792	2406
ENSMUSG00000114256	processed_pseudogene	Gm29844	ENSMUST00000225012	processed_pseudogene		13	1	77169378	511
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000227999	processed_transcript		15	-1	27742323	3132
ENSMUSG00000019942	protein_coding	Cdk1	ENSMUST00000152448	protein_coding		10	-1	69350830	695
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000142758	processed_transcript		11	-1	116387405	326
ENSMUSG00000019942	protein_coding	Cdk1	ENSMUST00000149474	retained_intron		10	-1	69345434	616
ENSMUSG00000024826	protein_coding	Dpf2	ENSMUST00000129816	retained_intron		19	-1	5903332	1115
ENSMUSG00000069049	protein_coding	Eif2s3y	ENSMUST00000137006	retained_intron		Y	1	1010595	983
ENSMUSG00000024826	protein_coding	Dpf2	ENSMUST00000137465	retained_intron		19	-1	5902441	2167
ENSMUSG00000019942	protein_coding	Cdk1	ENSMUST00000124054	retained_intron		10	-1	69352910	475
ENSMUSG00000101191	antisense	Gm28809	ENSMUST00000187542	antisense		6	1	125481363	782
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000019135	protein_coding	principal3	11	-1	115604051	3816
ENSMUSG00000052949	protein_coding	Rnf157	ENSMUST00000149682	processed_transcript		11	-1	116413032	1891
ENSMUSG00000081929	processed_pseudogene	Rps11-ps2	ENSMUST00000121547	processed_pseudogene		11	1	116382750	456
ENSMUSG00000114411	processed_pseudogene	Gm48176	ENSMUST00000224461	processed_pseudogene		13	1	57276678	451
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000106508	protein_coding	alternative2	11	-1	115604051	3582
ENSMUSG00000101191	antisense	Gm28809	ENSMUST00000187724	antisense		6	1	125481944	381
ENSMUSG00000101162	processed_transcript	Gm26728	ENSMUST00000203423	antisense		6	1	125494424	1333
ENSMUSG00000029221	protein_coding	Slc30a9	ENSMUST00000162372	protein_coding	principal3	5	1	67306955	5711
ENSMUSG00000101162	processed_transcript	Gm26728	ENSMUST00000204130	retained_intron		6	1	125494428	1542
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000156173	nonsense_mediated_decay		11	-1	115604051	3751
ENSMUSG00000029221	protein_coding	Slc30a9	ENSMUST00000201173	retained_intron		5	1	67306964	2791
ENSMUSG00000101162	processed_transcript	Gm26728	ENSMUST00000185268	antisense		6	1	125494430	595
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000061895	protein_coding		5	-1	32785646	2183
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000154832	processed_transcript		11	-1	115589521	4848
ENSMUSG00000033285	protein_coding	Wdr3	ENSMUST00000052120	protein_coding	principal1	3	-1	100162407	3432
ENSMUSG00000069049	protein_coding	Eif2s3y	ENSMUST00000148961	retained_intron		Y	1	1010595	3114
ENSMUSG00000024826	protein_coding	Dpf2	ENSMUST00000123029	retained_intron		19	-1	5912777	735
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000123485	processed_transcript		11	-1	115589055	1221
ENSMUSG00000069049	protein_coding	Eif2s3y	ENSMUST00000154556	retained_intron		Y	1	1010599	531
ENSMUSG00000024826	protein_coding	Dpf2	ENSMUST00000142995	retained_intron		19	-1	5912769	725
ENSMUSG00000069049	protein_coding	Eif2s3y	ENSMUST00000139083	processed_transcript		Y	1	1010624	578
ENSMUSG00000024826	protein_coding	Dpf2	ENSMUST00000154365	processed_transcript		19	-1	5913010	314
ENSMUSG00000033285	protein_coding	Wdr3	ENSMUST00000135812	retained_intron		3	-1	100141621	398
ENSMUSG00000007034	protein_coding	Slc44a4	ENSMUST00000173664	retained_intron		17	1	34914466	3055
ENSMUSG00000069049	protein_coding	Eif2s3y	ENSMUST00000134820	retained_intron		Y	1	1023106	590
ENSMUSG00000024826	protein_coding	Dpf2	ENSMUST00000155937	processed_transcript		19	-1	5912807	370
ENSMUSG00000083983	processed_pseudogene	Gm12375	ENSMUST00000119331	processed_pseudogene		4	-1	37889918	921
ENSMUSG00000020702	protein_coding	Ccl1	ENSMUST00000108189	protein_coding	principal1	11	-1	82179812	514
ENSMUSG00000113240	processed_pseudogene	Gm48338	ENSMUST00000221976	processed_pseudogene		13	-1	15118631	246
ENSMUSG00000093736	unprocessed_pseudogene	Obox4-ps38	ENSMUST00000175961	unprocessed_pseudogene		7	1	14867592	724
ENSMUSG00000099198	unprocessed_pseudogene	Obox4-ps39	ENSMUST00000184306	unprocessed_pseudogene		7	1	14887535	628
ENSMUSG00000113389	processed_pseudogene	Gm9512	ENSMUST00000223112	processed_pseudogene		13	1	15118632	497
ENSMUSG00000020702	protein_coding	Ccl1	ENSMUST00000021043	protein_coding		11	-1	82179812	611
ENSMUSG00000080057	processed_pseudogene	Gm12378	ENSMUST00000116171	processed_pseudogene		4	1	37970874	1461
ENSMUSG00000098469	unprocessed_pseudogene	Ranbp2-ps4	ENSMUST00000183481	unprocessed_pseudogene		7	-1	14894231	385
ENSMUSG00000082899	processed_pseudogene	Gm12379	ENSMUST00000119607	processed_pseudogene		4	1	38028845	391
ENSMUSG00000021903	protein_coding	Galnt15	ENSMUST00000022460	protein_coding	principal1	14	1	32028989	6326
ENSMUSG00000094555	unprocessed_pseudogene	Obox4-ps6	ENSMUST00000176578	unprocessed_pseudogene		7	1	14905458	724
ENSMUSG00000084148	processed_pseudogene	Gm12380	ENSMUST00000119012	processed_pseudogene		4	1	38263918	544
ENSMUSG00000093509	unprocessed_pseudogene	Obox3-ps3	ENSMUST00000177242	unprocessed_pseudogene		7	-1	14933238	1004
ENSMUSG00000021903	protein_coding	Galnt15	ENSMUST00000164208	protein_coding		14	1	32029410	3563
ENSMUSG00000020702	protein_coding	Ccl1	ENSMUST00000138333	processed_transcript		11	-1	82305690	2126
ENSMUSG00000115628	processed_pseudogene	Gm49084	ENSMUST00000228805	processed_pseudogene		14	-1	32036338	424
ENSMUSG00000029221	protein_coding	Slc30a9	ENSMUST00000202521	nonsense_mediated_decay		5	1	67306965	3272
ENSMUSG00000029221	protein_coding	Slc30a9	ENSMUST00000159907	processed_transcript		5	1	67307184	383
ENSMUSG00000030342	protein_coding	Cd9	ENSMUST00000032492	protein_coding	principal1	6	-1	125494791	1228
ENSMUSG00000033285	protein_coding	Wdr3	ENSMUST00000146989	retained_intron		3	-1	100162407	4002
ENSMUSG00000029221	protein_coding	Slc30a9	ENSMUST00000200734	nonsense_mediated_decay		5	1	67315700	678
ENSMUSG00000033285	protein_coding	Wdr3	ENSMUST00000129319	retained_intron		3	-1	100143582	291
ENSMUSG00000029221	protein_coding	Slc30a9	ENSMUST00000202770	protein_coding		5	1	67315726	425
ENSMUSG00000033285	protein_coding	Wdr3	ENSMUST00000125059	nonsense_mediated_decay		3	-1	100162332	591
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000128437	processed_transcript		11	-1	115603884	966
ENSMUSG00000096768	lincRNA	Gm47283	ENSMUST00000179483	lincRNA		Y	1	90784738	696
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000136790	processed_transcript		11	-1	115588027	224
ENSMUSG00000033285	protein_coding	Wdr3	ENSMUST00000197602	nonsense_mediated_decay		3	-1	100162397	524
ENSMUSG00000030342	protein_coding	Cd9	ENSMUST00000130132	processed_transcript		6	-1	125478302	904
ENSMUSG00000041445	protein_coding	Mmrn2	ENSMUST00000111908	protein_coding	principal1	14	1	34375465	3974
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000110536	protein_coding		13	1	14063785	5783
ENSMUSG00000096768	lincRNA	Gm47283	ENSMUST00000238758	lincRNA		Y	1	90784911	1272
ENSMUSG00000029221	protein_coding	Slc30a9	ENSMUST00000161169	retained_intron		5	1	67332099	4838
ENSMUSG00000030342	protein_coding	Cd9	ENSMUST00000140024	retained_intron		6	-1	125463024	786
ENSMUSG00000096768	lincRNA	Gm47283	ENSMUST00000238238	lincRNA		Y	1	90785848	567
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000123831	processed_transcript		11	-1	115603876	1158
ENSMUSG00000096768	lincRNA	Gm47283	ENSMUST00000238471	lincRNA		Y	1	90790451	3347
ENSMUSG00000089694	protein_coding	Nat8f7	ENSMUST00000160534	protein_coding	principal1	6	-1	85713205	1822
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000148782	processed_transcript		11	-1	115603888	932
ENSMUSG00000041025	protein_coding	Iffo2	ENSMUST00000123827	protein_coding	principal3	4	1	139530548	2036
ENSMUSG00000041445	protein_coding	Mmrn2	ENSMUST00000227130	protein_coding		14	1	34375721	519
ENSMUSG00000089694	protein_coding	Nat8f7	ENSMUST00000179613	protein_coding	principal1	6	-1	85707858	686
ENSMUSG00000108106	transcribed_unprocessed_pseudogene	Gm5886	ENSMUST00000203420	processed_transcript		6	-1	133767403	641
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000125097	protein_coding		11	-1	115603893	379
ENSMUSG00000108106	transcribed_unprocessed_pseudogene	Gm5886	ENSMUST00000203983	processed_transcript		6	-1	133767404	2613
ENSMUSG00000108106	transcribed_unprocessed_pseudogene	Gm5886	ENSMUST00000203957	transcribed_unprocessed_pseudogene		6	-1	133767403	522
ENSMUSG00000085244	antisense	Spag17os	ENSMUST00000145279	antisense		3	-1	100106895	3219
ENSMUSG00000097729	processed_transcript	2310015A10Rik	ENSMUST00000218078	retained_intron		12	-1	80121139	594
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000149814	processed_transcript		11	-1	115603724	366
ENSMUSG00000085244	antisense	Spag17os	ENSMUST00000137776	antisense		3	-1	100106895	2437
ENSMUSG00000020740	protein_coding	Gga3	ENSMUST00000132503	processed_transcript		11	-1	115603880	412
ENSMUSG00000096768	lincRNA	Gm47283	ENSMUST00000177671	lincRNA		Y	1	90785501	708
ENSMUSG00000028550	protein_coding	Atg4c	ENSMUST00000030279	protein_coding	principal1	4	1	99193934	3178
ENSMUSG00000041025	protein_coding	Iffo2	ENSMUST00000174078	protein_coding	alternative2	4	1	139574720	5716
ENSMUSG00000086718	antisense	Gm16069	ENSMUST00000131146	antisense		3	-1	89182293	545
ENSMUSG00000097729	processed_transcript	2310015A10Rik	ENSMUST00000219349	processed_transcript		12	-1	80132802	778
ENSMUSG00000028550	protein_coding	Atg4c	ENSMUST00000152121	processed_transcript		4	1	99218091	612
ENSMUSG00000097729	processed_transcript	2310015A10Rik	ENSMUST00000220125	processed_transcript		12	-1	80132596	576
ENSMUSG00000096768	lincRNA	Gm47283	ENSMUST00000177591	lincRNA		Y	1	90785442	774
ENSMUSG00000041025	protein_coding	Iffo2	ENSMUST00000040023	protein_coding	principal3	4	1	139531689	5227
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000110534	protein_coding	principal1	13	1	14063792	5864
ENSMUSG00000028550	protein_coding	Atg4c	ENSMUST00000180278	protein_coding	principal1	4	1	99194147	2792
ENSMUSG00000097729	processed_transcript	2310015A10Rik	ENSMUST00000180643	processed_transcript		12	-1	80132844	1399
ENSMUSG00000096768	lincRNA	Gm47283	ENSMUST00000179077	lincRNA		Y	1	90785586	887
ENSMUSG00000105505	unprocessed_pseudogene	Obox4-ps7	ENSMUST00000196144	unprocessed_pseudogene		7	-1	14948041	505
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000110533	protein_coding		13	1	14063799	3020
ENSMUSG00000081427	processed_pseudogene	Gm12382	ENSMUST00000122005	processed_pseudogene		4	1	38663809	922
ENSMUSG00000060808	antisense	B9d1os	ENSMUST00000137010	antisense		11	-1	61505059	674
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000151182	processed_transcript		13	1	14064055	678
ENSMUSG00000090256	unprocessed_pseudogene	Alms1-ps1	ENSMUST00000159498	unprocessed_pseudogene		6	1	85721925	2166
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000202283	nonsense_mediated_decay		5	-1	32742475	2127
ENSMUSG00000051262	protein_coding	Nat8f3	ENSMUST00000201219	processed_transcript		6	-1	85765754	1580
ENSMUSG00000104479	TEC	Gm10305	ENSMUST00000195331	TEC		4	1	99272671	2475
ENSMUSG00000035311	protein_coding	Gnptab	ENSMUST00000127615	protein_coding		10	1	88379132	686
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000222928	nonsense_mediated_decay		13	1	14064823	815
ENSMUSG00000041423	protein_coding	Paqr6	ENSMUST00000147948	protein_coding		3	1	88364584	837
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000222346	retained_intron		13	1	14135462	3353
ENSMUSG00000085632	lincRNA	Gm12381	ENSMUST00000126314	lincRNA		4	-1	38855483	2186
ENSMUSG00000099056	unprocessed_pseudogene	Gtpbp4-ps3	ENSMUST00000184093	unprocessed_pseudogene		7	-1	14965622	136
ENSMUSG00000031758	protein_coding	Cdyl2	ENSMUST00000109102	protein_coding	principal1	8	-1	116732991	2411
ENSMUSG00000051262	protein_coding	Nat8f3	ENSMUST00000050780	protein_coding	principal1	6	-1	85765744	1821
ENSMUSG00000070891	protein_coding	Gm12689	ENSMUST00000094955	protein_coding	principal1	4	1	99295900	1359
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000201980	retained_intron		5	-1	32742475	3097
ENSMUSG00000030834	protein_coding	Abcc6	ENSMUST00000002850	protein_coding	principal1	7	-1	46030302	4974
ENSMUSG00000051262	protein_coding	Nat8f3	ENSMUST00000168531	protein_coding	principal1	6	-1	85762480	1347
ENSMUSG00000113410	lincRNA	Gm20043	ENSMUST00000222267	lincRNA		13	1	15375624	2565
ENSMUSG00000046756	protein_coding	Mrps7	ENSMUST00000058109	protein_coding	principal1	11	1	115603925	1962
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000142957	nonsense_mediated_decay		5	-1	32785639	2084
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000149579	retained_intron		13	1	14164190	4571
ENSMUSG00000099087	processed_pseudogene	Ranbp2-ps5	ENSMUST00000185141	processed_pseudogene		7	-1	14992298	379
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000071829	protein_coding		5	-1	32742475	1986
ENSMUSG00000030834	protein_coding	Abcc6	ENSMUST00000209985	retained_intron		7	-1	45977686	492
ENSMUSG00000093567	unprocessed_pseudogene	Obox4-ps8	ENSMUST00000175831	unprocessed_pseudogene		7	1	15007074	714
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000172719	protein_coding		12	1	3806527	827
ENSMUSG00000041423	protein_coding	Paqr6	ENSMUST00000147991	protein_coding	principal1	3	1	88364589	1670
ENSMUSG00000082238	processed_pseudogene	Gm12383	ENSMUST00000120628	processed_pseudogene		4	1	39263544	760
ENSMUSG00000030834	protein_coding	Abcc6	ENSMUST00000211780	retained_intron		7	-1	46001069	760
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000148941	retained_intron		13	1	14177983	4828
ENSMUSG00000093707	unprocessed_pseudogene	Obox4-ps9	ENSMUST00000176927	unprocessed_pseudogene		7	1	15023991	1136
ENSMUSG00000046756	protein_coding	Mrps7	ENSMUST00000141556	processed_transcript		11	1	115604867	572
ENSMUSG00000109702	processed_pseudogene	Gm45674	ENSMUST00000210043	processed_pseudogene		7	1	45972412	450
ENSMUSG00000031629	protein_coding	Cenpu	ENSMUST00000034045	protein_coding	principal1	8	1	46552028	2931
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000120591	protein_coding	principal1	5	-1	32746312	2491
ENSMUSG00000093770	unprocessed_pseudogene	Obox3-ps4	ENSMUST00000176026	unprocessed_pseudogene		7	-1	15057804	1005
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000201314	retained_intron		5	-1	32740384	2240
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000151151	nonsense_mediated_decay		13	1	14191177	745
ENSMUSG00000041423	protein_coding	Paqr6	ENSMUST00000149640	processed_transcript		3	1	88364591	765
ENSMUSG00000069495	protein_coding	Epc2	ENSMUST00000092123	protein_coding	principal1	2	1	49451486	4697
ENSMUSG00000041423	protein_coding	Paqr6	ENSMUST00000123200	retained_intron		3	1	88364593	806
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000197787	nonsense_mediated_decay		5	-1	32742475	908
ENSMUSG00000039219	protein_coding	Arid4b	ENSMUST00000039538	protein_coding		13	1	14063792	5844
ENSMUSG00000072875	protein_coding	Gpr27	ENSMUST00000101122	protein_coding	principal1	6	1	99692679	2388
ENSMUSG00000069495	protein_coding	Epc2	ENSMUST00000152485	protein_coding		2	1	49528875	751
ENSMUSG00000041423	protein_coding	Paqr6	ENSMUST00000147818	retained_intron		3	1	88366722	1284
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000200390	nonsense_mediated_decay		5	-1	32742335	761
ENSMUSG00000100554	processed_pseudogene	Gm7690	ENSMUST00000190885	processed_pseudogene		1	1	17947041	1399
ENSMUSG00000022234	protein_coding	Cct5	ENSMUST00000022842	protein_coding	principal1	15	-1	31601804	1853
ENSMUSG00000028737	protein_coding	Aldh4a1	ENSMUST00000039818	protein_coding	principal1	4	1	139622866	3382
ENSMUSG00000097806	processed_transcript	Gm6556	ENSMUST00000181118	lincRNA		13	-1	15462669	362
ENSMUSG00000097806	processed_transcript	Gm6556	ENSMUST00000193256	TEC		13	-1	15463736	1921
ENSMUSG00000099503	lincRNA	Gm28822	ENSMUST00000191140	lincRNA		1	1	23574587	778
ENSMUSG00000036510	protein_coding	Cdh8	ENSMUST00000155527	protein_coding		8	-1	99416427	3159
ENSMUSG00000109887	processed_transcript	Gm28756	ENSMUST00000209898	retained_intron		1	-1	18035002	1714
ENSMUSG00000106322	processed_pseudogene	Gm43432	ENSMUST00000196352	processed_pseudogene		5	-1	88545156	121
ENSMUSG00000109887	processed_transcript	Gm28756	ENSMUST00000209405	lincRNA		1	-1	18059056	2461
ENSMUSG00000109887	processed_transcript	Gm28756	ENSMUST00000191057	lincRNA		1	-1	18058790	666
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000138360	retained_intron		5	-1	32785581	790
ENSMUSG00000022234	protein_coding	Cct5	ENSMUST00000160174	retained_intron		15	-1	31593061	817
ENSMUSG00000102001	unprocessed_pseudogene	Gm28755	ENSMUST00000185773	unprocessed_pseudogene		1	-1	18016186	199
ENSMUSG00000031629	protein_coding	Cenpu	ENSMUST00000211217	retained_intron		8	1	46552038	997
ENSMUSG00000099473	transcribed_unprocessed_pseudogene	Gm18775	ENSMUST00000190763	transcribed_unprocessed_pseudogene		1	-1	17999622	586
ENSMUSG00000022234	protein_coding	Cct5	ENSMUST00000159449	retained_intron		15	-1	31594528	622
ENSMUSG00000099591	processed_pseudogene	Gm17969	ENSMUST00000185706	processed_pseudogene		1	1	17993813	2557
ENSMUSG00000101717	transcribed_unprocessed_pseudogene	Gm45784	ENSMUST00000188360	transcribed_unprocessed_pseudogene		1	-1	18058269	142
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000202641	retained_intron		5	-1	32740854	728
ENSMUSG00000028737	protein_coding	Aldh4a1	ENSMUST00000146309	processed_transcript		4	1	139622894	4142
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000135248	protein_coding		5	-1	32746411	897
ENSMUSG00000036510	protein_coding	Cdh8	ENSMUST00000142129	protein_coding		8	-1	99416427	2711
ENSMUSG00000028737	protein_coding	Aldh4a1	ENSMUST00000124987	processed_transcript		4	1	139623109	615
ENSMUSG00000096276	protein_coding	Gm2042	ENSMUST00000180803	protein_coding		12	1	87954080	837
ENSMUSG00000023452	protein_coding	Pisd	ENSMUST00000145759	retained_intron		5	-1	32785626	865
ENSMUSG00000096276	protein_coding	Gm2042	ENSMUST00000180707	protein_coding		12	1	87954132	375
ENSMUSG00000043535	protein_coding	Setx	ENSMUST00000061578	protein_coding	principal1	2	1	29124992	10970
ENSMUSG00000022234	protein_coding	Cct5	ENSMUST00000161266	protein_coding		15	-1	31601539	845
ENSMUSG00000064036	protein_coding	Mro	ENSMUST00000120033	protein_coding	alternative2	18	1	73859385	1898
ENSMUSG00000022234	protein_coding	Cct5	ENSMUST00000159121	retained_intron		15	-1	31601740	769
ENSMUSG00000064036	protein_coding	Mro	ENSMUST00000136473	processed_transcript		18	1	73859394	789
ENSMUSG00000043535	protein_coding	Setx	ENSMUST00000154910	retained_intron		2	1	29125886	538
ENSMUSG00000010095	protein_coding	Slc3a2	ENSMUST00000170157	protein_coding	alternative2	19	-1	8723369	2813
ENSMUSG00000031629	protein_coding	Cenpu	ENSMUST00000135432	nonsense_mediated_decay		8	1	46552055	3010
ENSMUSG00000043535	protein_coding	Setx	ENSMUST00000135992	processed_transcript		2	1	29157216	577
ENSMUSG00000064036	protein_coding	Mro	ENSMUST00000119239	protein_coding	principal3	18	1	73859402	1772
ENSMUSG00000031629	protein_coding	Cenpu	ENSMUST00000153908	nonsense_mediated_decay		8	1	46552061	377
ENSMUSG00000096276	protein_coding	Gm2042	ENSMUST00000181347	protein_coding		12	1	87954214	947
ENSMUSG00000036510	protein_coding	Cdh8	ENSMUST00000093249	protein_coding		8	-1	99416439	3790
ENSMUSG00000031629	protein_coding	Cenpu	ENSMUST00000210368	protein_coding		8	1	46552069	357
ENSMUSG00000064036	protein_coding	Mro	ENSMUST00000139821	retained_intron		18	1	73863631	1877
ENSMUSG00000043535	protein_coding	Setx	ENSMUST00000145422	protein_coding		2	1	29164458	1141
ENSMUSG00000064036	protein_coding	Mro	ENSMUST00000134847	protein_coding		18	1	73863672	548
ENSMUSG00000010095	protein_coding	Slc3a2	ENSMUST00000206598	protein_coding		19	-1	8712985	1393
ENSMUSG00000031629	protein_coding	Cenpu	ENSMUST00000093518	protein_coding		8	1	46552087	783
ENSMUSG00000094439	protein_coding	Gm21969	ENSMUST00000178644	nonsense_mediated_decay	principal1	4	1	139603186	4402
ENSMUSG00000035311	protein_coding	Gnptab	ENSMUST00000130301	protein_coding		10	1	88379224	569
ENSMUSG00000064036	protein_coding	Mro	ENSMUST00000179472	protein_coding	alternative2	18	1	73859387	2194
ENSMUSG00000036510	protein_coding	Cdh8	ENSMUST00000145601	nonsense_mediated_decay		8	-1	99416319	4320
ENSMUSG00000110870	processed_pseudogene	Gm47081	ENSMUST00000217534	processed_pseudogene		10	1	91228186	312
ENSMUSG00000031629	protein_coding	Cenpu	ENSMUST00000129371	processed_transcript		8	1	46560077	356
ENSMUSG00000110847	processed_pseudogene	Gm18705	ENSMUST00000215985	processed_pseudogene		10	-1	91259344	913
ENSMUSG00000013367	protein_coding	Iglon5	ENSMUST00000107974	protein_coding	principal1	7	-1	43490075	2622
ENSMUSG00000031629	protein_coding	Cenpu	ENSMUST00000122838	nonsense_mediated_decay		8	1	46561728	473
ENSMUSG00000103097	TEC	Gm37556	ENSMUST00000193877	TEC		4	-1	99385712	468
ENSMUSG00000035311	protein_coding	Gnptab	ENSMUST00000151273	nonsense_mediated_decay		10	1	88379224	5297
ENSMUSG00000010095	protein_coding	Slc3a2	ENSMUST00000010239	protein_coding	principal3	19	-1	8713879	1819
ENSMUSG00000031629	protein_coding	Cenpu	ENSMUST00000136724	retained_intron		8	1	46573173	651
ENSMUSG00000081184	processed_pseudogene	Gm12685	ENSMUST00000121702	processed_pseudogene		4	-1	99418711	214
ENSMUSG00000013367	protein_coding	Iglon5	ENSMUST00000206336	protein_coding		7	-1	43478233	762
ENSMUSG00000082442	processed_pseudogene	Gm12686	ENSMUST00000120546	processed_pseudogene		4	1	99418773	397
ENSMUSG00000110270	antisense	Gm45607	ENSMUST00000211143	antisense		8	1	46604749	678
ENSMUSG00000010095	protein_coding	Slc3a2	ENSMUST00000205377	protein_coding		19	-1	8713355	378
ENSMUSG00000030069	protein_coding	Prok2	ENSMUST00000101120	protein_coding	principal1	6	-1	99726392	1450
ENSMUSG00000081150	processed_pseudogene	Gm12684	ENSMUST00000118675	processed_pseudogene		4	-1	99431254	999
ENSMUSG00000010095	protein_coding	Slc3a2	ENSMUST00000205463	protein_coding		19	-1	8713356	239
ENSMUSG00000102464	TEC	Gm38199	ENSMUST00000192013	TEC		7	-1	40080681	3277
ENSMUSG00000036510	protein_coding	Cdh8	ENSMUST00000128860	protein_coding	principal1	8	-1	99416471	4594
ENSMUSG00000024030	protein_coding	Abcg1	ENSMUST00000236391	protein_coding		17	1	31057675	912
ENSMUSG00000100549	protein_coding	Ifna11	ENSMUST00000170428	protein_coding	principal1	4	1	88819959	573
ENSMUSG00000010095	protein_coding	Slc3a2	ENSMUST00000206797	protein_coding		19	-1	8714433	814
ENSMUSG00000056836	processed_pseudogene	Gm6851	ENSMUST00000154478	processed_pseudogene		7	1	40190937	395
ENSMUSG00000010095	protein_coding	Slc3a2	ENSMUST00000206895	retained_intron		19	-1	8723198	812
ENSMUSG00000010095	protein_coding	Slc3a2	ENSMUST00000206560	protein_coding		19	-1	8714096	480
ENSMUSG00000101252	protein_coding	Ifna6	ENSMUST00000105146	protein_coding	principal1	4	1	88827416	570
ENSMUSG00000101153	lincRNA	4933404I11Rik	ENSMUST00000190294	lincRNA		7	1	40262705	1202
ENSMUSG00000010095	protein_coding	Slc3a2	ENSMUST00000205538	protein_coding		19	-1	8714183	402
ENSMUSG00000054280	protein_coding	Prr14l	ENSMUST00000120129	protein_coding	principal1	5	-1	32854256	9959
ENSMUSG00000080803	processed_pseudogene	Gm12683	ENSMUST00000117528	processed_pseudogene		4	-1	99520466	415
ENSMUSG00000036510	protein_coding	Cdh8	ENSMUST00000126895	retained_intron		8	-1	99279473	1410
ENSMUSG00000030069	protein_coding	Prok2	ENSMUST00000032152	protein_coding		6	-1	99726353	1423
ENSMUSG00000036510	protein_coding	Cdh8	ENSMUST00000142475	protein_coding		8	-1	99416439	3216
ENSMUSG00000082038	processed_pseudogene	Gm12071	ENSMUST00000121968	processed_pseudogene		11	1	26712905	469
ENSMUSG00000103575	TEC	Gm37117	ENSMUST00000194238	TEC		4	1	99525932	589
ENSMUSG00000054280	protein_coding	Prr14l	ENSMUST00000155392	nonsense_mediated_decay		5	-1	32828678	2746
ENSMUSG00000086842	processed_pseudogene	Gm15681	ENSMUST00000137501	processed_pseudogene		8	-1	99148089	2704
ENSMUSG00000054280	protein_coding	Prr14l	ENSMUST00000147752	retained_intron		5	-1	32796104	709
ENSMUSG00000054280	protein_coding	Prr14l	ENSMUST00000130134	protein_coding		5	-1	32854238	217
ENSMUSG00000096682	protein_coding	Ifna5	ENSMUST00000102804	protein_coding	principal1	4	1	88835525	570
ENSMUSG00000090116	sense_overlapping	Gm15680	ENSMUST00000161597	sense_overlapping		8	-1	99506770	465
ENSMUSG00000093574	protein_coding	Gm20671	ENSMUST00000144673	protein_coding	principal1	5	-1	32827109	1731
ENSMUSG00000095201	protein_coding	Vmn1r91	ENSMUST00000165330	protein_coding	principal1	7	1	20099680	3422
ENSMUSG00000090106	processed_pseudogene	Gm15838	ENSMUST00000161575	processed_pseudogene		1	-1	44018649	180
ENSMUSG00000100650	lincRNA	Gm28807	ENSMUST00000187799	lincRNA		7	-1	40469240	471
ENSMUSG00000030069	protein_coding	Prok2	ENSMUST00000008273	protein_coding		6	-1	99726383	594
ENSMUSG00000112509	processed_pseudogene	Gm47211	ENSMUST00000219632	processed_pseudogene		10	-1	69373312	426
ENSMUSG00000069939	processed_pseudogene	Gm12070	ENSMUST00000119551	processed_pseudogene		11	1	26786633	1002
ENSMUSG00000070904	protein_coding	Ifna4	ENSMUST00000094973	protein_coding	principal1	4	1	88841861	561
ENSMUSG00000058388	protein_coding	Phtf1	ENSMUST00000117150	protein_coding	principal3	3	1	103968110	2921
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000170957	protein_coding	principal1	13	-1	14063488	4244
ENSMUSG00000030069	protein_coding	Prok2	ENSMUST00000203738	protein_coding		6	-1	99726392	695
ENSMUSG00000087332	lincRNA	Gm12690	ENSMUST00000132108	lincRNA		4	1	99569500	354
ENSMUSG00000096152	protein_coding	Vmn1r240	ENSMUST00000079099	protein_coding	principal1	7	-1	20122579	924
ENSMUSG00000118476	processed_pseudogene	Gm50466	ENSMUST00000238362	processed_pseudogene		7	-1	40639834	436
ENSMUSG00000028049	protein_coding	Scamp3	ENSMUST00000029684	protein_coding	principal3	3	1	89177473	1489
ENSMUSG00000083698	processed_pseudogene	Gm12687	ENSMUST00000119752	processed_pseudogene		4	-1	99616522	706
ENSMUSG00000095498	protein_coding	Ifna1	ENSMUST00000094972	protein_coding	principal1	4	1	88850087	570
ENSMUSG00000097548	antisense	Gm26748	ENSMUST00000180406	antisense		6	1	99725771	2972
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000222747	nonsense_mediated_decay		13	-1	14063386	2209
ENSMUSG00000082294	processed_pseudogene	Gm12072	ENSMUST00000118293	processed_pseudogene		11	1	26832804	715
ENSMUSG00000021318	protein_coding	Gli3	ENSMUST00000130065	protein_coding		13	1	15463235	2004
ENSMUSG00000028049	protein_coding	Scamp3	ENSMUST00000120697	protein_coding	alternative2	3	1	89177490	1475
ENSMUSG00000086096	lincRNA	Gm12688	ENSMUST00000136525	lincRNA		4	-1	99654983	701
ENSMUSG00000058388	protein_coding	Phtf1	ENSMUST00000063717	protein_coding	principal3	3	1	103968258	3327
ENSMUSG00000080987	processed_pseudogene	Gm12073	ENSMUST00000117382	processed_pseudogene		11	-1	26856910	524
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000223329	protein_coding		13	-1	14054189	829
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000223090	nonsense_mediated_decay		13	-1	14054455	770
ENSMUSG00000096164	protein_coding	Vmn1r93	ENSMUST00000098747	protein_coding	principal1	7	-1	20139088	966
ENSMUSG00000047343	protein_coding	Mettl21c	ENSMUST00000061421	protein_coding	principal1	1	-1	44020006	1086
ENSMUSG00000021318	protein_coding	Gli3	ENSMUST00000141194	protein_coding		13	1	15463251	466
ENSMUSG00000058388	protein_coding	Phtf1	ENSMUST00000145727	nonsense_mediated_decay		3	1	103968366	5647
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000222164	nonsense_mediated_decay		13	-1	14063413	1340
ENSMUSG00000102004	lincRNA	4933402C06Rik	ENSMUST00000206289	lincRNA		7	1	40674737	443
ENSMUSG00000104974	TEC	Gm43686	ENSMUST00000197351	TEC		5	-1	52545344	2439
ENSMUSG00000083895	processed_pseudogene	Gm12074	ENSMUST00000120189	processed_pseudogene		11	1	27051697	219
ENSMUSG00000028358	protein_coding	Zfp618	ENSMUST00000030043	protein_coding		4	1	62965573	1582
ENSMUSG00000102004	lincRNA	4933402C06Rik	ENSMUST00000190160	lincRNA		7	1	40674737	1000
ENSMUSG00000102004	lincRNA	4933402C06Rik	ENSMUST00000207559	lincRNA		7	1	40674737	1227
ENSMUSG00000028049	protein_coding	Scamp3	ENSMUST00000136165	retained_intron		3	1	89177496	721
ENSMUSG00000028049	protein_coding	Scamp3	ENSMUST00000098941	protein_coding		3	1	89177520	1338
ENSMUSG00000047343	protein_coding	Mettl21c	ENSMUST00000162750	processed_transcript		1	-1	44017468	593
ENSMUSG00000021318	protein_coding	Gli3	ENSMUST00000130535	retained_intron		13	1	15463723	2915
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000222687	protein_coding		13	-1	14063409	762
ENSMUSG00000073155	protein_coding	1810058I24Rik	ENSMUST00000152147	protein_coding	principal1	6	1	35252654	2521
ENSMUSG00000047343	protein_coding	Mettl21c	ENSMUST00000159881	retained_intron		1	-1	44020034	3482
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000223174	protein_coding		13	-1	14063373	870
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000221338	protein_coding		13	-1	14063410	652
ENSMUSG00000073155	protein_coding	1810058I24Rik	ENSMUST00000130875	protein_coding		6	1	35252716	690
ENSMUSG00000090263	lincRNA	D730045A05Rik	ENSMUST00000159260	lincRNA		18	1	74017907	1269
ENSMUSG00000091844	protein_coding	Gm8251	ENSMUST00000238662	protein_coding	principal5	1	-1	44079746	20036
ENSMUSG00000041958	protein_coding	Pigs	ENSMUST00000048073	protein_coding	principal1	11	1	78328415	2501
ENSMUSG00000091844	protein_coding	Gm8251	ENSMUST00000168641	protein_coding	alternative2	1	-1	44061936	5985
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000221713	protein_coding		13	-1	14063418	667
ENSMUSG00000073155	protein_coding	1810058I24Rik	ENSMUST00000136110	retained_intron		6	1	35252732	1232
ENSMUSG00000084792	lincRNA	1700056N10Rik	ENSMUST00000141875	lincRNA		16	1	17047520	1043
ENSMUSG00000058388	protein_coding	Phtf1	ENSMUST00000055425	protein_coding		3	1	103968368	3060
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000221953	protein_coding		13	-1	14059462	804
ENSMUSG00000080735	processed_pseudogene	Gm12075	ENSMUST00000117426	processed_pseudogene		11	-1	27418386	397
ENSMUSG00000028343	protein_coding	Erp44	ENSMUST00000030028	protein_coding	principal1	4	-1	48279558	2624
ENSMUSG00000028049	protein_coding	Scamp3	ENSMUST00000156447	retained_intron		3	1	89177531	802
ENSMUSG00000021302	protein_coding	Ggps1	ENSMUST00000221406	processed_transcript		13	-1	14063413	459
ENSMUSG00000085735	antisense	Mettl5os	ENSMUST00000129114	antisense		2	1	69885728	667
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000084027	protein_coding	principal3	8	1	25518759	5025
ENSMUSG00000117491	processed_pseudogene	Gm50082	ENSMUST00000234842	processed_pseudogene		18	-1	17676119	256
ENSMUSG00000028343	protein_coding	Erp44	ENSMUST00000138743	processed_transcript		4	-1	48197024	442
ENSMUSG00000028049	protein_coding	Scamp3	ENSMUST00000148881	retained_intron		3	1	89177537	676
ENSMUSG00000028343	protein_coding	Erp44	ENSMUST00000132927	processed_transcript		4	-1	48244474	384
ENSMUSG00000101098	unprocessed_pseudogene	Gm20808	ENSMUST00000191433	unprocessed_pseudogene		Y	-1	78762038	693
ENSMUSG00000028343	protein_coding	Erp44	ENSMUST00000148947	processed_transcript		4	-1	48279452	586
ENSMUSG00000117439	processed_pseudogene	Gm50083	ENSMUST00000234539	processed_pseudogene		18	1	17828819	202
ENSMUSG00000028358	protein_coding	Zfp618	ENSMUST00000107415	protein_coding	principal1	4	1	62965573	8826
ENSMUSG00000117574	lincRNA	Gm50084	ENSMUST00000234831	lincRNA		18	-1	18244157	967
ENSMUSG00000024558	protein_coding	Mapk4	ENSMUST00000162863	nonsense_mediated_decay		18	-1	74064392	4828
ENSMUSG00000028358	protein_coding	Zfp618	ENSMUST00000151324	processed_transcript		4	1	63120400	144
ENSMUSG00000028049	protein_coding	Scamp3	ENSMUST00000129294	retained_intron		3	1	89177621	969
ENSMUSG00000117378	lincRNA	Gm31086	ENSMUST00000234128	lincRNA		18	1	19133217	886
ENSMUSG00000028049	protein_coding	Scamp3	ENSMUST00000124291	retained_intron		3	1	89177758	694
ENSMUSG00000028358	protein_coding	Zfp618	ENSMUST00000064814	protein_coding		4	1	62965574	2868
ENSMUSG00000021318	protein_coding	Gli3	ENSMUST00000110510	protein_coding	principal1	13	1	15463980	8170
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000119398	protein_coding		8	1	25518789	3789
ENSMUSG00000096276	protein_coding	Gm2042	ENSMUST00000110145	protein_coding	principal3	12	1	87954428	1894
ENSMUSG00000086849	sense_intronic	Gm13840	ENSMUST00000149608	sense_intronic		5	1	115515263	256
ENSMUSG00000020607	protein_coding	Lratd1	ENSMUST00000020926	protein_coding	principal1	12	-1	14152054	4164
ENSMUSG00000024030	protein_coding	Abcg1	ENSMUST00000024829	protein_coding	principal1	17	1	31057687	5832
ENSMUSG00000113191	processed_pseudogene	Gm48343	ENSMUST00000220835	processed_pseudogene		13	1	15649935	211
ENSMUSG00000045287	protein_coding	Rtn4rl1	ENSMUST00000102514	protein_coding	principal1	11	1	75193783	3525
ENSMUSG00000020607	protein_coding	Lratd1	ENSMUST00000221405	protein_coding		12	-1	14151349	371
ENSMUSG00000024030	protein_coding	Abcg1	ENSMUST00000236427	protein_coding		17	1	31057727	1372
ENSMUSG00000042810	protein_coding	Krba1	ENSMUST00000114571	protein_coding		6	1	48395586	6695
ENSMUSG00000096276	protein_coding	Gm2042	ENSMUST00000181843	protein_coding		12	1	87954475	698
ENSMUSG00000035311	protein_coding	Gnptab	ENSMUST00000020251	protein_coding	principal1	10	1	88379226	5390
ENSMUSG00000097684	lincRNA	Gm26645	ENSMUST00000181076	lincRNA		13	-1	15461295	1316
ENSMUSG00000094739	protein_coding	Gm20806	ENSMUST00000190349	protein_coding	principal1	Y	-1	78838056	1223
ENSMUSG00000042810	protein_coding	Krba1	ENSMUST00000031815	protein_coding		6	1	48395614	3685
ENSMUSG00000035311	protein_coding	Gnptab	ENSMUST00000132738	processed_transcript		10	1	88429566	726
ENSMUSG00000094739	protein_coding	Gm20806	ENSMUST00000180324	protein_coding	principal1	Y	-1	78836543	684
ENSMUSG00000024030	protein_coding	Abcg1	ENSMUST00000139013	retained_intron		17	1	31057774	1085
ENSMUSG00000019055	protein_coding	Plod1	ENSMUST00000019199	protein_coding	principal1	4	-1	147936767	3243
ENSMUSG00000042810	protein_coding	Krba1	ENSMUST00000204308	retained_intron		6	1	48395630	5055
ENSMUSG00000035311	protein_coding	Gnptab	ENSMUST00000141343	processed_transcript		10	1	88433361	1856
ENSMUSG00000024030	protein_coding	Abcg1	ENSMUST00000236241	protein_coding		17	1	31110965	644
ENSMUSG00000058388	protein_coding	Phtf1	ENSMUST00000150090	retained_intron		3	1	103968372	4179
ENSMUSG00000024558	protein_coding	Mapk4	ENSMUST00000091851	protein_coding	principal1	18	-1	74064929	4594
ENSMUSG00000035311	protein_coding	Gnptab	ENSMUST00000155306	retained_intron		10	1	88436044	536
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000123948	protein_coding	principal4	2	-1	23040122	3067
ENSMUSG00000026249	protein_coding	Serpine2	ENSMUST00000027467	protein_coding	principal1	1	-1	79858696	2210
ENSMUSG00000117636	processed_pseudogene	Gm38432	ENSMUST00000234485	processed_pseudogene		18	-1	19371798	990
ENSMUSG00000102071	unprocessed_pseudogene	Gm28815	ENSMUST00000186751	unprocessed_pseudogene		Y	-1	78866096	615
ENSMUSG00000042810	protein_coding	Krba1	ENSMUST00000203371	protein_coding		6	1	48395632	4000
ENSMUSG00000117407	transcribed_processed_pseudogene	Gm7720	ENSMUST00000234553	processed_transcript		18	-1	19554960	755
ENSMUSG00000096276	protein_coding	Gm2042	ENSMUST00000180706	protein_coding	alternative2	12	1	87954479	1059
ENSMUSG00000099871	unprocessed_pseudogene	Gm21742	ENSMUST00000189352	unprocessed_pseudogene		Y	1	90837413	548
ENSMUSG00000019055	protein_coding	Plod1	ENSMUST00000149129	protein_coding		4	-1	147921096	805
ENSMUSG00000087429	antisense	Gm16235	ENSMUST00000146132	antisense		10	-1	88449887	342
ENSMUSG00000058388	protein_coding	Phtf1	ENSMUST00000123611	protein_coding		3	1	103968374	1261
ENSMUSG00000105094	unprocessed_pseudogene	Obox4-ps10	ENSMUST00000199376	unprocessed_pseudogene		7	-1	15075768	504
ENSMUSG00000026249	protein_coding	Serpine2	ENSMUST00000189793	protein_coding		1	-1	79821322	696
ENSMUSG00000024558	protein_coding	Mapk4	ENSMUST00000159162	protein_coding		18	-1	74064922	3514
ENSMUSG00000117407	transcribed_processed_pseudogene	Gm7720	ENSMUST00000234168	transcribed_processed_pseudogene		18	-1	19550393	463
ENSMUSG00000087429	antisense	Gm16235	ENSMUST00000149562	antisense		10	-1	88445934	206
ENSMUSG00000042810	protein_coding	Krba1	ENSMUST00000077093	protein_coding		6	1	48395658	8380
ENSMUSG00000024558	protein_coding	Mapk4	ENSMUST00000160601	processed_transcript		18	-1	74065359	426
ENSMUSG00000026249	protein_coding	Serpine2	ENSMUST00000190724	protein_coding		1	-1	79861180	822
ENSMUSG00000100741	unprocessed_pseudogene	Gm28814	ENSMUST00000187334	unprocessed_pseudogene		Y	-1	78903009	696
ENSMUSG00000058388	protein_coding	Phtf1	ENSMUST00000090685	protein_coding	alternative1	3	1	103968446	3006
ENSMUSG00000042810	protein_coding	Krba1	ENSMUST00000127980	processed_transcript		6	1	48395698	375
ENSMUSG00000026249	protein_coding	Serpine2	ENSMUST00000153862	retained_intron		1	-1	79858696	2315
ENSMUSG00000027865	protein_coding	Gdap2	ENSMUST00000029459	protein_coding	principal1	3	1	100162381	3008
ENSMUSG00000026249	protein_coding	Serpine2	ENSMUST00000191529	retained_intron		1	-1	79820304	3393
ENSMUSG00000042810	protein_coding	Krba1	ENSMUST00000114572	protein_coding	principal1	6	1	48395866	4323
ENSMUSG00000096276	protein_coding	Gm2042	ENSMUST00000181394	protein_coding		12	1	87954502	650
ENSMUSG00000019055	protein_coding	Plod1	ENSMUST00000124292	retained_intron		4	-1	147936742	4097
ENSMUSG00000026249	protein_coding	Serpine2	ENSMUST00000191026	retained_intron		1	-1	79858635	1129
ENSMUSG00000101804	lincRNA	Gm28813	ENSMUST00000186293	lincRNA		Y	1	78927796	1497
ENSMUSG00000111525	lincRNA	Gm47082	ENSMUST00000214371	lincRNA		10	1	91310345	494
ENSMUSG00000058388	protein_coding	Phtf1	ENSMUST00000156262	protein_coding		3	1	103968588	962
ENSMUSG00000111591	processed_pseudogene	Gm47083	ENSMUST00000215290	processed_pseudogene		10	1	91423354	382
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000117179	protein_coding	alternative1	8	1	25518795	4046
ENSMUSG00000020037	protein_coding	Rfx4	ENSMUST00000060397	protein_coding	principal1	10	1	84756062	3534
ENSMUSG00000019055	protein_coding	Plod1	ENSMUST00000124041	retained_intron		4	-1	147923727	512
ENSMUSG00000020057	protein_coding	Dram1	ENSMUST00000156097	nonsense_mediated_decay		10	-1	88356996	2762
ENSMUSG00000096276	protein_coding	Gm2042	ENSMUST00000181326	protein_coding	alternative2	12	1	87954502	2440
ENSMUSG00000101804	lincRNA	Gm28813	ENSMUST00000190034	lincRNA		Y	1	78928248	436
ENSMUSG00000111051	processed_pseudogene	Gm47084	ENSMUST00000213414	processed_pseudogene		10	-1	91448380	160
ENSMUSG00000067261	protein_coding	Foxd3	ENSMUST00000087285	protein_coding	principal1	4	1	99656299	2324
ENSMUSG00000027865	protein_coding	Gdap2	ENSMUST00000106997	protein_coding		3	1	100162518	2014
ENSMUSG00000019055	protein_coding	Plod1	ENSMUST00000105712	protein_coding		4	-1	147936725	1059
ENSMUSG00000058388	protein_coding	Phtf1	ENSMUST00000150849	nonsense_mediated_decay		3	1	103968925	1485
ENSMUSG00000042810	protein_coding	Krba1	ENSMUST00000148697	processed_transcript		6	1	48404043	587
ENSMUSG00000007034	protein_coding	Slc44a4	ENSMUST00000007249	protein_coding	principal1	17	1	34914470	2261
ENSMUSG00000099621	unprocessed_pseudogene	Gm20919	ENSMUST00000185282	unprocessed_pseudogene		Y	-1	79074940	696
ENSMUSG00000019055	protein_coding	Plod1	ENSMUST00000132075	processed_transcript		4	-1	147936708	358
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000148322	processed_transcript		8	1	25518895	734
ENSMUSG00000058388	protein_coding	Phtf1	ENSMUST00000130385	retained_intron		3	1	103996420	444
ENSMUSG00000020037	protein_coding	Rfx4	ENSMUST00000173479	processed_transcript		10	1	84762238	331
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000210778	processed_transcript		8	1	25519344	381
ENSMUSG00000020037	protein_coding	Rfx4	ENSMUST00000165868	processed_transcript		10	1	84762238	270
ENSMUSG00000104583	sense_intronic	Gm42701	ENSMUST00000196117	sense_intronic		3	-1	104145855	1657
ENSMUSG00000117059	processed_pseudogene	Gm7912	ENSMUST00000233762	processed_pseudogene		17	-1	23620900	995
ENSMUSG00000027865	protein_coding	Gdap2	ENSMUST00000150223	processed_transcript		3	1	100162544	330
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000124228	protein_coding		8	1	25519837	488
ENSMUSG00000024905	protein_coding	Tesmin	ENSMUST00000025840	protein_coding	principal3	19	1	3388857	2234
ENSMUSG00000096276	protein_coding	Gm2042	ENSMUST00000181031	processed_transcript		12	1	87954503	788
ENSMUSG00000020037	protein_coding	Rfx4	ENSMUST00000166696	protein_coding		10	1	84834746	3332
ENSMUSG00000042810	protein_coding	Krba1	ENSMUST00000154536	retained_intron		6	1	48409199	5693
ENSMUSG00000007034	protein_coding	Slc44a4	ENSMUST00000169230	protein_coding		17	1	34917719	2246
ENSMUSG00000089998	antisense	Phtf1os	ENSMUST00000160110	antisense		3	-1	103968581	4046
ENSMUSG00000096276	protein_coding	Gm2042	ENSMUST00000181300	protein_coding		12	1	87954548	618
ENSMUSG00000106063	sense_intronic	C030032O16Rik	ENSMUST00000196427	sense_intronic		3	-1	104156248	716
ENSMUSG00000042810	protein_coding	Krba1	ENSMUST00000204554	retained_intron		6	1	48413336	4581
ENSMUSG00000027865	protein_coding	Gdap2	ENSMUST00000197797	protein_coding		3	1	100194580	1041
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000210846	protein_coding		8	1	25532125	385
ENSMUSG00000027865	protein_coding	Gdap2	ENSMUST00000200036	retained_intron		3	1	100200687	1784
ENSMUSG00000106432	sense_intronic	Gm43259	ENSMUST00000198446	sense_intronic		3	-1	104167200	3277
ENSMUSG00000020037	protein_coding	Rfx4	ENSMUST00000020226	processed_transcript		10	1	84838148	1490
ENSMUSG00000082763	processed_pseudogene	Tra2b-ps	ENSMUST00000119906	processed_pseudogene		3	-1	100078644	168
ENSMUSG00000024905	protein_coding	Tesmin	ENSMUST00000151341	protein_coding		19	1	3388885	2013
ENSMUSG00000113336	lincRNA	Gm16497	ENSMUST00000222024	lincRNA		12	1	14261534	2842
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000232645	protein_coding		16	-1	17722900	3105
ENSMUSG00000061286	protein_coding	Exosc5	ENSMUST00000079634	protein_coding	principal1	7	1	25659164	1020
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000091394	protein_coding	alternative1	2	-1	23040137	3023
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000167764	protein_coding		8	1	25532281	2915
ENSMUSG00000113336	lincRNA	Gm16497	ENSMUST00000223480	lincRNA		12	1	14261556	557
ENSMUSG00000020037	protein_coding	Rfx4	ENSMUST00000095388	protein_coding		10	1	84838148	3274
ENSMUSG00000085156	lincRNA	Snhg15	ENSMUST00000124818	lincRNA		11	-1	6528766	771
ENSMUSG00000061286	protein_coding	Exosc5	ENSMUST00000206561	protein_coding	principal1	7	1	25659191	1680
ENSMUSG00000070697	protein_coding	Utp3	ENSMUST00000090413	protein_coding	principal1	5	1	88554462	1629
ENSMUSG00000028854	protein_coding	Slc9a1	ENSMUST00000030669	protein_coding	principal1	4	1	133369706	4676
ENSMUSG00000024905	protein_coding	Tesmin	ENSMUST00000127142	protein_coding	alternative2	19	1	3389379	1714
ENSMUSG00000095867	protein_coding	Gm20917	ENSMUST00000188706	protein_coding	principal1	Y	-1	79151122	1224
ENSMUSG00000024905	protein_coding	Tesmin	ENSMUST00000142193	protein_coding	alternative2	19	1	3389379	2279
ENSMUSG00000028854	protein_coding	Slc9a1	ENSMUST00000140681	processed_transcript		4	1	133370644	725
ENSMUSG00000061286	protein_coding	Exosc5	ENSMUST00000205966	nonsense_mediated_decay		7	1	25659212	682
ENSMUSG00000095867	protein_coding	Gm20917	ENSMUST00000179922	protein_coding	principal1	Y	-1	79149787	990
ENSMUSG00000070875	protein_coding	Olfr1100	ENSMUST00000117211	protein_coding	principal1	2	-1	86979954	2937
ENSMUSG00000074489	protein_coding	Bglap3	ENSMUST00000107543	protein_coding	principal1	3	-1	88372743	1047
ENSMUSG00000061286	protein_coding	Exosc5	ENSMUST00000205275	retained_intron		7	1	25659212	5068
ENSMUSG00000028854	protein_coding	Slc9a1	ENSMUST00000156079	processed_transcript		4	1	133416306	760
ENSMUSG00000070875	protein_coding	Olfr1100	ENSMUST00000094913	protein_coding	principal1	2	-1	86978797	969
ENSMUSG00000105254	lincRNA	Gm42951	ENSMUST00000199688	lincRNA		5	-1	23347274	684
ENSMUSG00000061286	protein_coding	Exosc5	ENSMUST00000205743	nonsense_mediated_decay		7	1	25659218	591
ENSMUSG00000020057	protein_coding	Dram1	ENSMUST00000020249	protein_coding	principal1	10	-1	88357075	2807
ENSMUSG00000099876	lincRNA	Gm29650	ENSMUST00000188485	lincRNA		Y	1	1048393	742
ENSMUSG00000074489	protein_coding	Bglap3	ENSMUST00000152477	retained_intron		3	-1	88369581	818
ENSMUSG00000113961	processed_pseudogene	Gm48498	ENSMUST00000220577	processed_pseudogene		12	-1	14493244	3841
ENSMUSG00000028854	protein_coding	Slc9a1	ENSMUST00000132864	processed_transcript		4	1	133419481	579
ENSMUSG00000061286	protein_coding	Exosc5	ENSMUST00000205614	retained_intron		7	1	25664387	725
ENSMUSG00000039328	protein_coding	Rnf122	ENSMUST00000046941	protein_coding	principal2	8	1	31111820	3582
ENSMUSG00000085156	lincRNA	Snhg15	ENSMUST00000147762	lincRNA		11	-1	6528779	611
ENSMUSG00000100784	lincRNA	Gm28421	ENSMUST00000186378	lincRNA		Y	1	79165870	356
ENSMUSG00000074489	protein_coding	Bglap3	ENSMUST00000140259	retained_intron		3	-1	88369722	816
ENSMUSG00000020057	protein_coding	Dram1	ENSMUST00000138159	protein_coding		10	-1	88379080	372
ENSMUSG00000091749	transcribed_unprocessed_pseudogene	Tspy-ps	ENSMUST00000172304	processed_transcript		Y	-1	1058868	321
ENSMUSG00000020651	protein_coding	Slc26a4	ENSMUST00000001253	protein_coding	principal1	12	-1	31559969	3075
ENSMUSG00000075167	protein_coding	Olfr1101	ENSMUST00000214411	protein_coding	principal1	2	-1	86991221	3235
ENSMUSG00000085156	lincRNA	Snhg15	ENSMUST00000129570	lincRNA		11	-1	6527759	1631
ENSMUSG00000028854	protein_coding	Slc9a1	ENSMUST00000141658	processed_transcript		4	1	133419972	928
ENSMUSG00000039328	protein_coding	Rnf122	ENSMUST00000162640	retained_intron		8	1	31111830	3998
ENSMUSG00000050974	processed_pseudogene	Gm9847	ENSMUST00000052528	processed_pseudogene		12	1	14494561	599
ENSMUSG00000091749	transcribed_unprocessed_pseudogene	Tspy-ps	ENSMUST00000169014	processed_transcript		Y	-1	1057642	648
ENSMUSG00000039328	protein_coding	Rnf122	ENSMUST00000217278	protein_coding	alternative1	8	1	31111830	1726
ENSMUSG00000091749	transcribed_unprocessed_pseudogene	Tspy-ps	ENSMUST00000186546	transcribed_unprocessed_pseudogene		Y	-1	1058804	989
ENSMUSG00000075167	protein_coding	Olfr1101	ENSMUST00000099870	protein_coding	principal1	2	-1	86989174	933
ENSMUSG00000039252	protein_coding	Lgi2	ENSMUST00000199942	protein_coding	alternative2	5	-1	52566303	6273
ENSMUSG00000040820	protein_coding	Hlcs	ENSMUST00000228910	protein_coding	alternative2	16	-1	94246085	4150
ENSMUSG00000085156	lincRNA	Snhg15	ENSMUST00000134527	lincRNA		11	-1	6528763	1540
ENSMUSG00000039328	protein_coding	Rnf122	ENSMUST00000216520	processed_transcript		8	1	31111831	567
ENSMUSG00000039328	protein_coding	Rnf122	ENSMUST00000209547	retained_intron		8	1	31111864	2114
ENSMUSG00000090512	protein_coding	Gm3424	ENSMUST00000164585	protein_coding	principal5	14	-1	5830329	1758
ENSMUSG00000020651	protein_coding	Slc26a4	ENSMUST00000218992	processed_transcript		12	-1	31536573	385
ENSMUSG00000090512	protein_coding	Gm3424	ENSMUST00000178418	protein_coding	alternative2	14	-1	5830322	618
ENSMUSG00000074489	protein_coding	Bglap3	ENSMUST00000075523	protein_coding	principal1	3	-1	88369831	717
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000114544	protein_coding	alternative1	2	-1	23040185	2790
ENSMUSG00000094011	protein_coding	Vmn1r94	ENSMUST00000164526	protein_coding	principal1	7	-1	20168377	918
ENSMUSG00000039252	protein_coding	Lgi2	ENSMUST00000039750	protein_coding	principal3	5	-1	52566462	6456
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000153931	protein_coding	alternative1	2	-1	23040104	2729
ENSMUSG00000021198	protein_coding	Unc79	ENSMUST00000101099	protein_coding	principal2	12	1	102948859	8874
ENSMUSG00000074489	protein_coding	Bglap3	ENSMUST00000107542	protein_coding	principal1	3	-1	88372743	2051
ENSMUSG00000109240	unprocessed_pseudogene	Gm44598	ENSMUST00000207566	unprocessed_pseudogene		7	-1	20183229	150
ENSMUSG00000104829	antisense	Gm43685	ENSMUST00000198876	antisense		5	1	52538831	706
ENSMUSG00000078786	protein_coding	BC024978	ENSMUST00000108379	protein_coding	alternative2	7	1	27195781	7247
ENSMUSG00000086729	antisense	Gm15589	ENSMUST00000144193	antisense		5	1	24333923	271
ENSMUSG00000054351	lincRNA	4930553M12Rik	ENSMUST00000232970	lincRNA		4	-1	88868380	1148
ENSMUSG00000054351	lincRNA	4930553M12Rik	ENSMUST00000057837	lincRNA		4	-1	88868379	498
ENSMUSG00000078786	protein_coding	BC024978	ENSMUST00000155931	protein_coding		7	1	27197123	890
ENSMUSG00000078786	protein_coding	BC024978	ENSMUST00000123108	protein_coding		7	1	27202632	631
ENSMUSG00000045364	protein_coding	Ifne	ENSMUST00000056014	protein_coding	principal1	4	-1	88880201	664
ENSMUSG00000078786	protein_coding	BC024978	ENSMUST00000179391	protein_coding	principal3	7	1	27195781	1748
ENSMUSG00000085039	processed_transcript	Gm15927	ENSMUST00000148641	antisense		7	-1	3644636	1788
ENSMUSG00000061479	protein_coding	Snrpa	ENSMUST00000148491	retained_intron		7	-1	27189014	509
ENSMUSG00000085039	processed_transcript	Gm15927	ENSMUST00000206075	antisense		7	-1	3643250	372
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000078977	protein_coding	alternative1	2	-1	23040230	3027
ENSMUSG00000021198	protein_coding	Unc79	ENSMUST00000179002	protein_coding	alternative2	12	1	102949554	7965
ENSMUSG00000085039	processed_transcript	Gm15927	ENSMUST00000206440	retained_intron		7	-1	3644604	2298
ENSMUSG00000061702	protein_coding	Tmem91	ENSMUST00000079439	protein_coding	principal1	7	-1	25675166	877
ENSMUSG00000021198	protein_coding	Unc79	ENSMUST00000179039	retained_intron		12	1	103001067	4392
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000093171	protein_coding	alternative1	2	-1	23040140	2411
ENSMUSG00000085039	processed_transcript	Gm15927	ENSMUST00000137000	processed_transcript		7	-1	3644577	397
ENSMUSG00000021198	protein_coding	Unc79	ENSMUST00000178001	protein_coding		12	1	103001838	566
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000139038	protein_coding		2	-1	23040187	2899
ENSMUSG00000085039	processed_transcript	Gm15927	ENSMUST00000129971	processed_transcript		7	-1	3644887	196
ENSMUSG00000061702	protein_coding	Tmem91	ENSMUST00000150883	protein_coding		7	-1	25673473	314
ENSMUSG00000021198	protein_coding	Unc79	ENSMUST00000178076	protein_coding		12	1	103001946	7838
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000154162	retained_intron		2	-1	22962611	672
ENSMUSG00000061702	protein_coding	Tmem91	ENSMUST00000108404	protein_coding		7	-1	25675047	485
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000156344	retained_intron		2	-1	22960852	503
ENSMUSG00000001039	protein_coding	B9d1	ENSMUST00000102657	protein_coding	principal1	11	1	61505144	817
ENSMUSG00000061702	protein_coding	Tmem91	ENSMUST00000108405	protein_coding		7	-1	25675090	550
ENSMUSG00000024029	protein_coding	Tff3	ENSMUST00000024827	protein_coding	principal1	17	-1	31129646	493
ENSMUSG00000021198	protein_coding	Unc79	ENSMUST00000178846	retained_intron		12	1	103059079	1598
ENSMUSG00000061702	protein_coding	Tmem91	ENSMUST00000150306	retained_intron		7	-1	25675119	912
ENSMUSG00000021198	protein_coding	Unc79	ENSMUST00000177984	protein_coding		12	1	103095094	691
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000148294	retained_intron		2	-1	22950302	541
ENSMUSG00000029161	protein_coding	Cgref1	ENSMUST00000031051	protein_coding	principal1	5	-1	30945591	1442
ENSMUSG00000021198	protein_coding	Unc79	ENSMUST00000178467	nonsense_mediated_decay		12	1	103134541	394
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000135308	retained_intron		2	-1	22947210	875
ENSMUSG00000061702	protein_coding	Tmem91	ENSMUST00000126983	retained_intron		7	-1	25675118	2547
ENSMUSG00000107512	TEC	Gm44433	ENSMUST00000203540	TEC		6	-1	77433509	4832
ENSMUSG00000107947	TEC	Gm44438	ENSMUST00000204388	TEC		6	-1	77543082	3236
ENSMUSG00000108005	TEC	Gm44435	ENSMUST00000204379	TEC		6	-1	77416418	4119
ENSMUSG00000031493	protein_coding	Ggn	ENSMUST00000098609	protein_coding	principal2	7	1	29170210	2653
ENSMUSG00000029161	protein_coding	Cgref1	ENSMUST00000202627	retained_intron		5	-1	30945406	792
ENSMUSG00000021198	protein_coding	Unc79	ENSMUST00000085079	protein_coding	alternative2	12	1	103001889	7762
ENSMUSG00000107917	TEC	Gm44235	ENSMUST00000204312	TEC		6	-1	77474195	3058
ENSMUSG00000113706	processed_pseudogene	Gm47201	ENSMUST00000223546	processed_pseudogene		12	-1	103028412	464
ENSMUSG00000032623	protein_coding	Oas1d	ENSMUST00000044224	protein_coding	principal1	5	1	120914536	2021
ENSMUSG00000107483	TEC	Gm44288	ENSMUST00000205061	TEC		6	-1	77695773	2795
ENSMUSG00000094735	protein_coding	Vmn1r95	ENSMUST00000168984	protein_coding	principal1	7	1	20193710	924
ENSMUSG00000081658	processed_pseudogene	Gm12077	ENSMUST00000117049	processed_pseudogene		11	1	27498867	364
ENSMUSG00000060780	protein_coding	Lrrtm1	ENSMUST00000159616	protein_coding	principal1	6	1	77242697	2541
ENSMUSG00000047446	protein_coding	Arl4a	ENSMUST00000101472	protein_coding	principal1	12	-1	40038025	1200
ENSMUSG00000030725	protein_coding	Lipt2	ENSMUST00000032967	protein_coding	principal1	7	1	100159277	1663
ENSMUSG00000040820	protein_coding	Hlcs	ENSMUST00000163193	protein_coding	principal2	16	-1	94313563	5371
ENSMUSG00000020876	protein_coding	Snx11	ENSMUST00000021246	protein_coding	principal1	11	-1	96777531	2551
ENSMUSG00000001039	protein_coding	B9d1	ENSMUST00000140548	processed_transcript		11	1	61505203	661
ENSMUSG00000031493	protein_coding	Ggn	ENSMUST00000033886	protein_coding		7	1	29170390	588
ENSMUSG00000029026	protein_coding	Trp73	ENSMUST00000133533	protein_coding	alternative2	4	-1	154097173	4752
ENSMUSG00000001039	protein_coding	B9d1	ENSMUST00000138057	processed_transcript		11	1	61505252	890
ENSMUSG00000060780	protein_coding	Lrrtm1	ENSMUST00000161677	protein_coding	principal1	6	1	77242718	2518
ENSMUSG00000030725	protein_coding	Lipt2	ENSMUST00000207825	protein_coding		7	1	100159359	641
ENSMUSG00000040820	protein_coding	Hlcs	ENSMUST00000227141	protein_coding	alternative2	16	-1	94290286	4021
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000166810	protein_coding		14	1	32085374	234
ENSMUSG00000001039	protein_coding	B9d1	ENSMUST00000155176	processed_transcript		11	1	61505255	594
ENSMUSG00000113710	lincRNA	Gm38577	ENSMUST00000221531	lincRNA		11	-1	82387340	4545
ENSMUSG00000031493	protein_coding	Ggn	ENSMUST00000208288	nonsense_mediated_decay		7	1	29170390	1600
ENSMUSG00000047446	protein_coding	Arl4a	ENSMUST00000136441	nonsense_mediated_decay		12	-1	40037376	3936
ENSMUSG00000001039	protein_coding	B9d1	ENSMUST00000127889	protein_coding		11	1	61509116	494
ENSMUSG00000060780	protein_coding	Lrrtm1	ENSMUST00000020400	nonsense_mediated_decay		6	1	77242689	2958
ENSMUSG00000031493	protein_coding	Ggn	ENSMUST00000209019	protein_coding	alternative2	7	1	29170407	2148
ENSMUSG00000020876	protein_coding	Snx11	ENSMUST00000107661	protein_coding	principal1	11	-1	96777559	2197
ENSMUSG00000047446	protein_coding	Arl4a	ENSMUST00000144910	nonsense_mediated_decay		12	-1	40037367	1178
ENSMUSG00000001039	protein_coding	B9d1	ENSMUST00000146562	processed_transcript		11	1	61512315	405
ENSMUSG00000009681	protein_coding	Bcr	ENSMUST00000164107	protein_coding	principal1	10	1	75060592	6839
ENSMUSG00000060780	protein_coding	Lrrtm1	ENSMUST00000161811	protein_coding		6	1	77242922	776
ENSMUSG00000031493	protein_coding	Ggn	ENSMUST00000208330	protein_coding	alternative2	7	1	29170504	2205
ENSMUSG00000086592	antisense	Gm12682	ENSMUST00000144637	antisense		4	-1	99712972	1081
ENSMUSG00000040820	protein_coding	Hlcs	ENSMUST00000227447	processed_transcript		16	-1	94205634	682
ENSMUSG00000029026	protein_coding	Trp73	ENSMUST00000105644	protein_coding	alternative2	4	-1	154140208	5042
ENSMUSG00000020876	protein_coding	Snx11	ENSMUST00000127375	protein_coding		11	-1	96777492	797
ENSMUSG00000108077	TEC	6330415B21Rik	ENSMUST00000204215	TEC		6	-1	77382459	2200
ENSMUSG00000052305	protein_coding	Hbb-bs	ENSMUST00000023934	protein_coding	principal1	7	-1	103827928	628
ENSMUSG00000047446	protein_coding	Arl4a	ENSMUST00000138572	processed_transcript		12	-1	40014484	629
ENSMUSG00000040820	protein_coding	Hlcs	ENSMUST00000227618	processed_transcript		16	-1	94175000	669
ENSMUSG00000108102	TEC	Gm44437	ENSMUST00000203832	TEC		6	-1	77749782	4038
ENSMUSG00000040820	protein_coding	Hlcs	ENSMUST00000227698	protein_coding		16	-1	94223117	402
ENSMUSG00000020876	protein_coding	Snx11	ENSMUST00000125025	processed_transcript		11	-1	96771050	776
ENSMUSG00000020876	protein_coding	Snx11	ENSMUST00000132354	processed_transcript		11	-1	96774641	634
ENSMUSG00000029026	protein_coding	Trp73	ENSMUST00000097762	protein_coding	alternative2	4	-1	154097173	2205
ENSMUSG00000052305	protein_coding	Hbb-bs	ENSMUST00000131960	retained_intron		7	-1	103827725	344
ENSMUSG00000040820	protein_coding	Hlcs	ENSMUST00000226776	retained_intron		16	-1	94290270	3388
ENSMUSG00000020876	protein_coding	Snx11	ENSMUST00000136799	processed_transcript		11	-1	96777520	828
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000138104	nonsense_mediated_decay		8	1	25555617	1903
ENSMUSG00000040820	protein_coding	Hlcs	ENSMUST00000226249	retained_intron		16	-1	94313571	1355
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000012259	protein_coding	principal4	16	-1	17722947	3410
ENSMUSG00000085242	antisense	Gm11537	ENSMUST00000124865	antisense		11	1	96766802	791
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000138455	nonsense_mediated_decay		8	1	25558074	826
ENSMUSG00000047446	protein_coding	Arl4a	ENSMUST00000146905	protein_coding	principal1	12	-1	40037429	3710
ENSMUSG00000040820	protein_coding	Hlcs	ENSMUST00000099512	protein_coding	principal2	16	-1	94287856	4833
ENSMUSG00000052305	protein_coding	Hbb-bs	ENSMUST00000153218	protein_coding		7	-1	103828096	407
ENSMUSG00000029026	protein_coding	Trp73	ENSMUST00000105643	protein_coding	alternative2	4	-1	154097167	1916
ENSMUSG00000029026	protein_coding	Trp73	ENSMUST00000097763	nonsense_mediated_decay		4	-1	154097167	1861
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000126118	retained_intron		8	1	25563405	3332
ENSMUSG00000115325	processed_pseudogene	Gm48979	ENSMUST00000226729	processed_pseudogene		16	-1	94169659	334
ENSMUSG00000026155	protein_coding	Smap1	ENSMUST00000149737	processed_transcript		1	-1	23909736	1864
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000210504	retained_intron		8	1	25566000	3324
ENSMUSG00000029026	protein_coding	Trp73	ENSMUST00000155642	protein_coding		4	-1	154085322	759
ENSMUSG00000009681	protein_coding	Bcr	ENSMUST00000218591	protein_coding		10	1	75160360	489
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000120106	retained_intron		8	1	25566850	3386
ENSMUSG00000114993	processed_pseudogene	Gm6363	ENSMUST00000227202	processed_pseudogene		16	-1	94243347	1074
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000080936	protein_coding	alternative2	16	-1	17722897	3230
ENSMUSG00000037239	protein_coding	Spred3	ENSMUST00000048923	protein_coding	principal1	7	-1	29168647	4056
ENSMUSG00000029026	protein_coding	Trp73	ENSMUST00000139634	protein_coding		4	-1	154116605	613
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000211419	processed_transcript		8	1	25566866	599
ENSMUSG00000115044	TEC	Gm48978	ENSMUST00000227277	TEC		16	-1	94223012	4992
ENSMUSG00000009681	protein_coding	Bcr	ENSMUST00000218465	protein_coding		10	1	75173965	1460
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000140164	protein_coding	alternative1	2	-1	23040241	3403
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000145218	retained_intron		8	1	25569486	635
ENSMUSG00000115246	antisense	Gm48984	ENSMUST00000228762	antisense		16	1	94174541	594
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000232236	protein_coding	alternative2	16	-1	17722947	3404
ENSMUSG00000009681	protein_coding	Bcr	ENSMUST00000218057	protein_coding		10	1	75174971	835
ENSMUSG00000037239	protein_coding	Spred3	ENSMUST00000207778	retained_intron		7	-1	29167150	758
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000133936	retained_intron		8	1	25569723	840
ENSMUSG00000009681	protein_coding	Bcr	ENSMUST00000219807	retained_intron		10	1	75176376	846
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000231480	retained_intron		16	-1	17653055	831
ENSMUSG00000029026	protein_coding	Trp73	ENSMUST00000239448	protein_coding	principal3	4	-1	154140208	5046
ENSMUSG00000081392	processed_pseudogene	Gm11668	ENSMUST00000119655	processed_pseudogene		11	1	109007651	701
ENSMUSG00000037239	protein_coding	Spred3	ENSMUST00000130390	retained_intron		7	-1	29169841	2368
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000232012	retained_intron		16	-1	17653721	719
ENSMUSG00000037239	protein_coding	Spred3	ENSMUST00000208659	processed_transcript		7	-1	29170411	374
ENSMUSG00000087071	antisense	Trp73os	ENSMUST00000143429	antisense		4	1	154093479	2192
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000231231	retained_intron		16	-1	17655853	378
ENSMUSG00000097403	processed_transcript	9230116N13Rik	ENSMUST00000181746	antisense		1	-1	136415519	2097
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000149719	protein_coding	alternative1	2	-1	23040241	3303
ENSMUSG00000097403	processed_transcript	9230116N13Rik	ENSMUST00000194227	retained_intron		1	-1	136415494	2652
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000231674	nonsense_mediated_decay		16	-1	17722908	421
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000232202	protein_coding		16	-1	17722880	1062
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000232163	protein_coding		16	-1	17722821	654
ENSMUSG00000061479	protein_coding	Snrpa	ENSMUST00000122202	protein_coding	principal1	7	-1	27196245	1336
ENSMUSG00000035165	protein_coding	Kcne3	ENSMUST00000208555	processed_transcript		7	1	100176502	374
ENSMUSG00000026404	protein_coding	Ddx59	ENSMUST00000129218	retained_intron		1	1	136415271	1364
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000126112	protein_coding	alternative1	2	-1	23040195	3360
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000179592	protein_coding		8	1	25518772	5041
ENSMUSG00000031565	protein_coding	Fgfr1	ENSMUST00000178276	protein_coding		8	1	25518772	4741
ENSMUSG00000024681	protein_coding	Ms4a3	ENSMUST00000186023	protein_coding	principal1	19	-1	11640805	966
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000232005	retained_intron		16	-1	17722908	3118
ENSMUSG00000061479	protein_coding	Snrpa	ENSMUST00000080356	protein_coding	principal1	7	-1	27196271	1365
ENSMUSG00000022773	protein_coding	Ypel1	ENSMUST00000035682	protein_coding	principal1	16	1	17069696	3322
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000232431	protein_coding		16	-1	17722907	509
ENSMUSG00000056222	protein_coding	Spock1	ENSMUST00000187852	protein_coding	alternative2	13	-1	57908314	3113
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000231413	protein_coding		16	-1	17732891	634
ENSMUSG00000061479	protein_coding	Snrpa	ENSMUST00000126211	protein_coding		7	-1	27195760	968
ENSMUSG00000056222	protein_coding	Spock1	ENSMUST00000189373	protein_coding	principal4	13	-1	57908332	3128
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000232667	retained_intron		16	-1	17722890	1189
ENSMUSG00000024681	protein_coding	Ms4a3	ENSMUST00000112984	protein_coding	principal1	19	-1	11640834	1010
ENSMUSG00000086134	antisense	Gm16159	ENSMUST00000126122	antisense		8	-1	25556083	947
ENSMUSG00000061479	protein_coding	Snrpa	ENSMUST00000141378	nonsense_mediated_decay		7	-1	27196024	510
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000232401	retained_intron		16	-1	17722912	3475
ENSMUSG00000086134	antisense	Gm16159	ENSMUST00000140451	antisense		8	-1	25553560	252
ENSMUSG00000035165	protein_coding	Kcne3	ENSMUST00000178946	protein_coding	principal1	7	1	100176679	1323
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000231754	retained_intron		16	-1	17722912	1080
ENSMUSG00000078719	protein_coding	Msmp	ENSMUST00000107884	protein_coding	principal1	4	-1	43584494	743
ENSMUSG00000061479	protein_coding	Snrpa	ENSMUST00000206439	retained_intron		7	-1	27196153	1690
ENSMUSG00000061479	protein_coding	Snrpa	ENSMUST00000163311	protein_coding	principal1	7	-1	27195760	1288
ENSMUSG00000026155	protein_coding	Smap1	ENSMUST00000027339	protein_coding	principal1	1	-1	23922317	2289
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000231494	processed_transcript		16	-1	17722896	467
ENSMUSG00000024681	protein_coding	Ms4a3	ENSMUST00000190642	retained_intron		19	-1	11640851	1503
ENSMUSG00000056222	protein_coding	Spock1	ENSMUST00000185502	protein_coding		13	-1	57908275	4614
ENSMUSG00000022773	protein_coding	Ypel1	ENSMUST00000231518	processed_transcript		16	1	17070158	2185
ENSMUSG00000058835	protein_coding	Abi1	ENSMUST00000178908	protein_coding	alternative1	2	-1	23040219	2239
ENSMUSG00000056222	protein_coding	Spock1	ENSMUST00000186271	protein_coding		13	-1	57908291	2005
ENSMUSG00000030905	protein_coding	Crym	ENSMUST00000033198	protein_coding	principal1	7	-1	120202111	1383
ENSMUSG00000035165	protein_coding	Kcne3	ENSMUST00000207358	protein_coding	principal1	7	1	100178688	1154
ENSMUSG00000026155	protein_coding	Smap1	ENSMUST00000136506	processed_transcript		1	-1	23847777	445
ENSMUSG00000056222	protein_coding	Spock1	ENSMUST00000185905	protein_coding	alternative2	13	-1	57908299	2794
ENSMUSG00000086315	antisense	Arl4aos	ENSMUST00000135883	antisense		12	1	40038099	748
ENSMUSG00000026155	protein_coding	Smap1	ENSMUST00000129254	protein_coding		1	-1	23909689	1365
ENSMUSG00000012114	protein_coding	Med15	ENSMUST00000232312	processed_transcript		16	-1	17722915	469
ENSMUSG00000026784	protein_coding	Pdss1	ENSMUST00000139472	retained_intron		2	1	22934123	1950
ENSMUSG00000030905	protein_coding	Crym	ENSMUST00000134067	retained_intron		7	-1	120202111	2681
ENSMUSG00000056222	protein_coding	Spock1	ENSMUST00000172326	protein_coding		13	-1	57907587	1320
ENSMUSG00000022773	protein_coding	Ypel1	ENSMUST00000232168	retained_intron		16	1	17070198	1137
ENSMUSG00000116783	processed_pseudogene	Gm6048	ENSMUST00000232388	processed_pseudogene		16	1	17725376	310
ENSMUSG00000116561	processed_pseudogene	Gm18335	ENSMUST00000231388	processed_pseudogene		16	1	17702927	665
ENSMUSG00000022773	protein_coding	Ypel1	ENSMUST00000232258	protein_coding		16	1	17070199	726
ENSMUSG00000055895	protein_coding	Oosp2	ENSMUST00000135994	protein_coding	alternative2	19	-1	11660516	453
ENSMUSG00000116696	processed_pseudogene	Gm49683	ENSMUST00000231269	processed_pseudogene		16	1	17714861	279
ENSMUSG00000022773	protein_coding	Ypel1	ENSMUST00000231394	nonsense_mediated_decay		16	1	17070226	1082
ENSMUSG00000022773	protein_coding	Ypel1	ENSMUST00000231514	protein_coding		16	1	17070229	694
ENSMUSG00000026155	protein_coding	Smap1	ENSMUST00000148710	processed_transcript		1	-1	23869974	809
ENSMUSG00000109168	antisense	Gm44709	ENSMUST00000207649	antisense		7	1	28314898	448
ENSMUSG00000022773	protein_coding	Ypel1	ENSMUST00000232574	protein_coding		16	1	17070304	631
ENSMUSG00000022773	protein_coding	Ypel1	ENSMUST00000239090	protein_coding		16	1	17077836	459
ENSMUSG00000116795	TEC	Gm49600	ENSMUST00000231790	TEC		16	1	36894394	1290
ENSMUSG00000055497	processed_pseudogene	Gm9974	ENSMUST00000120357	processed_pseudogene		16	-1	17082691	693
ENSMUSG00000108672	TEC	Gm45008	ENSMUST00000206420	TEC		7	-1	40821110	493
ENSMUSG00000116645	antisense	Gm49584	ENSMUST00000232323	antisense		16	1	17092815	670
ENSMUSG00000026155	protein_coding	Smap1	ENSMUST00000141330	processed_transcript		1	-1	23909703	923
ENSMUSG00000034243	protein_coding	Golgb1	ENSMUST00000135800	processed_transcript		16	1	36875140	509
ENSMUSG00000031577	protein_coding	Tti2	ENSMUST00000209851	protein_coding	principal3	8	1	31150315	3133
ENSMUSG00000026155	protein_coding	Smap1	ENSMUST00000133398	retained_intron		1	-1	23891994	1271
ENSMUSG00000003752	protein_coding	Itpkc	ENSMUST00000003850	protein_coding	principal1	7	-1	27228628	3247
ENSMUSG00000055895	protein_coding	Oosp2	ENSMUST00000121793	protein_coding	principal2	19	-1	11660559	677
ENSMUSG00000005360	protein_coding	Slc1a3	ENSMUST00000005493	protein_coding	principal1	15	-1	8710764	4163
ENSMUSG00000031577	protein_coding	Tti2	ENSMUST00000210129	protein_coding	alternative2	8	1	31150327	4159
ENSMUSG00000035165	protein_coding	Kcne3	ENSMUST00000207995	protein_coding	principal1	7	1	100178697	439
ENSMUSG00000043051	protein_coding	Disc1	ENSMUST00000118942	protein_coding	alternative2	8	1	125054195	2860
ENSMUSG00000026156	protein_coding	B3gat2	ENSMUST00000144602	protein_coding		1	1	23761753	1488
ENSMUSG00000043051	protein_coding	Disc1	ENSMUST00000117658	protein_coding	principal3	8	1	125054195	2671
ENSMUSG00000005360	protein_coding	Slc1a3	ENSMUST00000125997	retained_intron		15	-1	8651506	4435
ENSMUSG00000104009	TEC	Gm38337	ENSMUST00000193986	TEC		18	-1	46113259	599
ENSMUSG00000003752	protein_coding	Itpkc	ENSMUST00000147170	processed_transcript		7	-1	27213052	642
ENSMUSG00000005360	protein_coding	Slc1a3	ENSMUST00000128879	retained_intron		15	-1	8643247	469
ENSMUSG00000026404	protein_coding	Ddx59	ENSMUST00000027655	protein_coding	principal1	1	1	136415271	2166
ENSMUSG00000003752	protein_coding	Itpkc	ENSMUST00000149067	retained_intron		7	-1	27214454	576
ENSMUSG00000031577	protein_coding	Tti2	ENSMUST00000209986	nonsense_mediated_decay		8	1	31150340	3652
ENSMUSG00000035165	protein_coding	Kcne3	ENSMUST00000049333	protein_coding	principal1	7	1	100178697	1012
ENSMUSG00000043051	protein_coding	Disc1	ENSMUST00000121953	protein_coding	alternative2	8	1	125054230	2676
ENSMUSG00000003752	protein_coding	Itpkc	ENSMUST00000206441	retained_intron		7	-1	27228661	2919
ENSMUSG00000043051	protein_coding	Disc1	ENSMUST00000122389	protein_coding	alternative2	8	1	125054209	1694
ENSMUSG00000026404	protein_coding	Ddx59	ENSMUST00000122959	processed_transcript		1	1	136430183	304
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000090247	protein_coding	principal1	15	-1	28025848	11495
ENSMUSG00000027800	protein_coding	Tm4sf1	ENSMUST00000196979	protein_coding	principal1	3	-1	57301936	3372
ENSMUSG00000026404	protein_coding	Ddx59	ENSMUST00000149783	retained_intron		1	1	136432402	516
ENSMUSG00000059105	protein_coding	Olfr1504	ENSMUST00000209192	protein_coding	principal1	19	-1	13897928	1514
ENSMUSG00000043051	protein_coding	Disc1	ENSMUST00000126111	processed_transcript		8	1	125087987	804
ENSMUSG00000005360	protein_coding	Slc1a3	ENSMUST00000153455	processed_transcript		15	-1	8710416	1252
ENSMUSG00000043051	protein_coding	Disc1	ENSMUST00000098311	protein_coding	alternative2	8	1	125054195	2597
ENSMUSG00000031577	protein_coding	Tti2	ENSMUST00000098842	protein_coding	principal3	8	1	31150316	5039
ENSMUSG00000027800	protein_coding	Tm4sf1	ENSMUST00000029376	protein_coding	principal1	3	-1	57301988	1436
ENSMUSG00000043051	protein_coding	Disc1	ENSMUST00000075730	protein_coding	principal3	8	1	125054195	2408
ENSMUSG00000059105	protein_coding	Olfr1504	ENSMUST00000078282	protein_coding	principal1	19	-1	13888305	1085
ENSMUSG00000005360	protein_coding	Slc1a3	ENSMUST00000157065	protein_coding		15	-1	8710409	728
ENSMUSG00000035165	protein_coding	Kcne3	ENSMUST00000170954	protein_coding	principal1	7	1	100178697	1315
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000227030	nonsense_mediated_decay		15	-1	27748551	2335
ENSMUSG00000078605	protein_coding	E030025P04Rik	ENSMUST00000106710	protein_coding	principal1	11	-1	109144369	1078
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000073242	protein_coding	alternative2	10	-1	60657333	10688
ENSMUSG00000036246	protein_coding	Gmip	ENSMUST00000036074	protein_coding	principal2	8	1	69808679	3933
ENSMUSG00000027800	protein_coding	Tm4sf1	ENSMUST00000198030	processed_transcript		3	-1	57294552	767
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000228054	retained_intron		15	-1	27736522	606
ENSMUSG00000117714	processed_pseudogene	Gm50439	ENSMUST00000238008	processed_pseudogene		18	-1	50209144	267
ENSMUSG00000043051	protein_coding	Disc1	ENSMUST00000074562	protein_coding	alternative2	8	1	125054195	2597
ENSMUSG00000005360	protein_coding	Slc1a3	ENSMUST00000129325	retained_intron		15	-1	8710496	964
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000105462	protein_coding	alternative2	10	-1	60657333	10592
ENSMUSG00000043051	protein_coding	Disc1	ENSMUST00000115885	protein_coding	alternative2	8	1	125054195	2408
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000226713	protein_coding		15	-1	27744003	550
ENSMUSG00000035165	protein_coding	Kcne3	ENSMUST00000179842	protein_coding	principal1	7	1	100178702	1059
ENSMUSG00000028344	protein_coding	Invs	ENSMUST00000156602	processed_transcript		4	1	48279760	1866
ENSMUSG00000027800	protein_coding	Tm4sf1	ENSMUST00000196506	protein_coding		3	-1	57295125	747
ENSMUSG00000039257	protein_coding	Vstm2b	ENSMUST00000044705	protein_coding	principal1	7	1	40898328	2627
ENSMUSG00000028344	protein_coding	Invs	ENSMUST00000151762	processed_transcript		4	1	48279800	472
ENSMUSG00000035165	protein_coding	Kcne3	ENSMUST00000208260	protein_coding	principal1	7	1	100178716	929
ENSMUSG00000026784	protein_coding	Pdss1	ENSMUST00000141215	protein_coding		2	1	22896048	486
ENSMUSG00000086694	antisense	Gm16237	ENSMUST00000156666	antisense		8	-1	125227323	1319
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000228084	retained_intron		15	-1	27744164	457
ENSMUSG00000027800	protein_coding	Tm4sf1	ENSMUST00000196704	retained_intron		3	-1	57293703	798
ENSMUSG00000039257	protein_coding	Vstm2b	ENSMUST00000206223	protein_coding		7	1	40899332	599
ENSMUSG00000005360	protein_coding	Slc1a3	ENSMUST00000133309	retained_intron		15	-1	8710481	1373
ENSMUSG00000036246	protein_coding	Gmip	ENSMUST00000123453	protein_coding	alternative2	8	1	69808690	3443
ENSMUSG00000109186	antisense	Gm34821	ENSMUST00000208399	antisense		7	-1	100176615	1031
ENSMUSG00000062314	protein_coding	Olfr1505	ENSMUST00000216623	protein_coding	principal1	19	1	13913530	3567
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000227642	retained_intron		15	-1	27744307	477
ENSMUSG00000005360	protein_coding	Slc1a3	ENSMUST00000126747	processed_transcript		15	-1	8709588	402
ENSMUSG00000039257	protein_coding	Vstm2b	ENSMUST00000186352	protein_coding		7	1	40900129	552
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000226644	protein_coding		15	-1	27841741	5233
ENSMUSG00000027800	protein_coding	Tm4sf1	ENSMUST00000171384	protein_coding	principal1	3	-1	57294889	2855
ENSMUSG00000062314	protein_coding	Olfr1505	ENSMUST00000216835	protein_coding	principal1	19	1	13913530	3685
ENSMUSG00000109186	antisense	Gm34821	ENSMUST00000209114	antisense		7	-1	100227207	1949
ENSMUSG00000103047	TEC	Gm37310	ENSMUST00000195237	TEC		15	-1	8655073	2968
ENSMUSG00000109435	processed_pseudogene	Gm7067	ENSMUST00000207698	processed_pseudogene		7	-1	100198348	1249
ENSMUSG00000026784	protein_coding	Pdss1	ENSMUST00000135621	nonsense_mediated_decay		2	1	22895619	352
ENSMUSG00000049843	protein_coding	Olfr1102	ENSMUST00000214002	protein_coding	principal1	2	1	86998398	1806
ENSMUSG00000062314	protein_coding	Olfr1505	ENSMUST00000081520	protein_coding	principal1	19	1	13918942	1103
ENSMUSG00000039257	protein_coding	Vstm2b	ENSMUST00000205845	protein_coding	principal1	7	1	40899278	1455
ENSMUSG00000026784	protein_coding	Pdss1	ENSMUST00000148072	processed_transcript		2	1	22895522	741
ENSMUSG00000090552	processed_pseudogene	Gm17158	ENSMUST00000168150	processed_pseudogene		14	1	5849357	493
ENSMUSG00000098058	processed_pseudogene	Gm8529	ENSMUST00000183298	processed_pseudogene		18	-1	50220815	745
ENSMUSG00000118595	processed_pseudogene	AC118632.1	ENSMUST00000239331	processed_pseudogene		18	1	50234638	207
ENSMUSG00000049843	protein_coding	Olfr1102	ENSMUST00000055129	protein_coding	principal1	2	1	87001932	1063
ENSMUSG00000026156	protein_coding	B3gat2	ENSMUST00000063663	protein_coding	principal1	1	1	23761926	5655
ENSMUSG00000101643	lincRNA	Gm28307	ENSMUST00000190685	lincRNA		7	1	40876543	2694
ENSMUSG00000036246	protein_coding	Gmip	ENSMUST00000143744	processed_transcript		8	1	69810537	692
ENSMUSG00000028115	protein_coding	Bnipl	ENSMUST00000107195	protein_coding	principal1	3	-1	95251193	1810
ENSMUSG00000083147	unprocessed_pseudogene	Olfr1103-ps1	ENSMUST00000119132	unprocessed_pseudogene		2	-1	87010874	937
ENSMUSG00000036246	protein_coding	Gmip	ENSMUST00000156620	processed_transcript		8	1	69810693	411
ENSMUSG00000098074	processed_pseudogene	Gm26993	ENSMUST00000182766	processed_pseudogene		19	-1	14018371	789
ENSMUSG00000026156	protein_coding	B3gat2	ENSMUST00000140583	protein_coding		1	1	23762011	1737
ENSMUSG00000036246	protein_coding	Gmip	ENSMUST00000154903	retained_intron		8	1	69813265	668
ENSMUSG00000075166	protein_coding	Olfr1104	ENSMUST00000214857	protein_coding	principal1	2	-1	87027080	2693
ENSMUSG00000090707	protein_coding	Gm8237	ENSMUST00000164484	protein_coding	principal5	14	-1	5880382	2051
ENSMUSG00000038319	protein_coding	Kcnh2	ENSMUST00000115098	protein_coding		5	-1	24329591	3193
ENSMUSG00000090707	protein_coding	Gm8237	ENSMUST00000178594	protein_coding	alternative2	14	-1	5863663	447
ENSMUSG00000100600	antisense	A230077H06Rik	ENSMUST00000189574	antisense		7	-1	40900937	2477
ENSMUSG00000075166	protein_coding	Olfr1104	ENSMUST00000215972	protein_coding	principal1	2	-1	87027080	2797
ENSMUSG00000028115	protein_coding	Bnipl	ENSMUST00000098871	protein_coding		3	-1	95251049	1414
ENSMUSG00000026784	protein_coding	Pdss1	ENSMUST00000149229	nonsense_mediated_decay		2	1	22935559	629
ENSMUSG00000091613	processed_pseudogene	Gm17046	ENSMUST00000168078	processed_pseudogene		14	1	5877076	850
ENSMUSG00000075166	protein_coding	Olfr1104	ENSMUST00000099869	protein_coding	principal1	2	-1	87022542	933
ENSMUSG00000028467	protein_coding	Gba2	ENSMUST00000128403	retained_intron		4	-1	43578089	3543
ENSMUSG00000036246	protein_coding	Gmip	ENSMUST00000138269	processed_transcript		8	1	69813886	686
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000227337	protein_coding		15	-1	27919271	6375
ENSMUSG00000036246	protein_coding	Gmip	ENSMUST00000127114	retained_intron		8	1	69816712	803
ENSMUSG00000100600	antisense	A230077H06Rik	ENSMUST00000188579	antisense		7	-1	40898324	2918
ENSMUSG00000100600	antisense	A230077H06Rik	ENSMUST00000189855	antisense		7	-1	40875324	748
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000226287	protein_coding		15	-1	27788638	850
ENSMUSG00000050017	protein_coding	Pitpnb	ENSMUST00000086635	protein_coding	principal3	5	1	111330763	2761
ENSMUSG00000028115	protein_coding	Bnipl	ENSMUST00000137250	protein_coding		3	-1	95251136	1251
ENSMUSG00000035420	protein_coding	Fam170a	ENSMUST00000238113	nonsense_mediated_decay		18	1	50278369	1335
ENSMUSG00000036246	protein_coding	Gmip	ENSMUST00000142659	protein_coding		8	1	69817828	455
ENSMUSG00000100600	antisense	A230077H06Rik	ENSMUST00000205953	antisense		7	-1	40898602	633
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000227044	retained_intron		15	-1	27823783	2570
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000226117	retained_intron		15	-1	27840027	2495
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000226580	retained_intron		15	-1	27853377	3887
ENSMUSG00000028467	protein_coding	Gba2	ENSMUST00000152251	retained_intron		4	-1	43578537	3531
ENSMUSG00000036246	protein_coding	Gmip	ENSMUST00000144540	processed_transcript		8	1	69818064	784
ENSMUSG00000050017	protein_coding	Pitpnb	ENSMUST00000200298	protein_coding	alternative1	5	1	111330807	2632
ENSMUSG00000028115	protein_coding	Bnipl	ENSMUST00000125515	protein_coding		3	-1	95251148	917
ENSMUSG00000028115	protein_coding	Bnipl	ENSMUST00000176070	retained_intron		3	-1	95248579	622
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000226775	protein_coding		15	-1	28024954	712
ENSMUSG00000024177	protein_coding	Nme4	ENSMUST00000236967	protein_coding		17	-1	26094168	795
ENSMUSG00000040026	protein_coding	Saa3	ENSMUST00000006956	protein_coding	principal1	7	-1	46715700	555
ENSMUSG00000004393	protein_coding	Ddx56	ENSMUST00000004507	protein_coding	principal1	11	-1	6267772	1956
ENSMUSG00000034243	protein_coding	Golgb1	ENSMUST00000114812	protein_coding	alternative2	16	1	36875168	11001
ENSMUSG00000050017	protein_coding	Pitpnb	ENSMUST00000196192	processed_transcript		5	1	111346488	485
ENSMUSG00000022263	protein_coding	Trio	ENSMUST00000228950	retained_intron		15	-1	27995363	442
ENSMUSG00000050017	protein_coding	Pitpnb	ENSMUST00000198137	retained_intron		5	1	111380169	850
ENSMUSG00000034243	protein_coding	Golgb1	ENSMUST00000134616	protein_coding		16	1	36875202	505
ENSMUSG00000115161	TEC	Gm20555	ENSMUST00000228406	TEC		15	-1	27867231	3433
ENSMUSG00000104559	antisense	Gm43118	ENSMUST00000199149	antisense		5	-1	111388289	775
ENSMUSG00000024177	protein_coding	Nme4	ENSMUST00000235157	protein_coding		17	-1	26094168	846
ENSMUSG00000004393	protein_coding	Ddx56	ENSMUST00000151446	protein_coding		11	-1	6267772	764
ENSMUSG00000115641	TEC	Gm9891	ENSMUST00000228765	TEC		15	1	27856307	807
ENSMUSG00000113711	processed_pseudogene	Gm9661	ENSMUST00000221611	processed_pseudogene		12	1	109827003	1122
ENSMUSG00000029269	protein_coding	Sult1b1	ENSMUST00000031199	protein_coding	principal1	5	-1	87538195	2604
ENSMUSG00000040026	protein_coding	Saa3	ENSMUST00000211660	processed_transcript		7	-1	46713749	494
ENSMUSG00000003435	protein_coding	Supt5	ENSMUST00000207563	nonsense_mediated_decay		7	-1	28338746	3640
ENSMUSG00000034243	protein_coding	Golgb1	ENSMUST00000152864	retained_intron		16	1	36924457	773
ENSMUSG00000068860	protein_coding	Gm128	ENSMUST00000090815	protein_coding	principal1	3	-1	95241598	1959
ENSMUSG00000113625	processed_pseudogene	Gm3379	ENSMUST00000222259	processed_pseudogene		12	-1	109895093	642
ENSMUSG00000090098	transcribed_unprocessed_pseudogene	Alms1-ps2	ENSMUST00000161983	transcribed_unprocessed_pseudogene		6	1	85774393	2290
ENSMUSG00000040026	protein_coding	Saa3	ENSMUST00000210913	protein_coding		7	-1	46715700	2200
ENSMUSG00000004393	protein_coding	Ddx56	ENSMUST00000155874	retained_intron		11	-1	6267746	621
ENSMUSG00000090098	transcribed_unprocessed_pseudogene	Alms1-ps2	ENSMUST00000160606	processed_transcript		6	1	85792117	1170
ENSMUSG00000003435	protein_coding	Supt5	ENSMUST00000207879	retained_intron		7	-1	28329185	3096
ENSMUSG00000034243	protein_coding	Golgb1	ENSMUST00000140266	retained_intron		16	1	36931400	516
ENSMUSG00000029269	protein_coding	Sult1b1	ENSMUST00000117455	protein_coding	principal1	5	-1	87536222	2612
ENSMUSG00000112940	lincRNA	4930511J24Rik	ENSMUST00000223541	lincRNA		12	1	109911785	1528
ENSMUSG00000004393	protein_coding	Ddx56	ENSMUST00000139073	retained_intron		11	-1	6266392	527
ENSMUSG00000107266	lincRNA	Gm43698	ENSMUST00000202390	lincRNA		5	1	67360387	378
ENSMUSG00000113063	lincRNA	Gm34667	ENSMUST00000222974	lincRNA		12	-1	110023873	1258
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000171598	protein_coding		14	1	32085376	749
ENSMUSG00000035420	protein_coding	Fam170a	ENSMUST00000039121	protein_coding	principal2	18	1	50278369	1343
ENSMUSG00000029269	protein_coding	Sult1b1	ENSMUST00000120150	protein_coding	principal1	5	-1	87535146	1213
ENSMUSG00000107266	lincRNA	Gm43698	ENSMUST00000202864	lincRNA		5	1	67365505	555
ENSMUSG00000034243	protein_coding	Golgb1	ENSMUST00000039855	protein_coding	principal2	16	1	36886134	10847
ENSMUSG00000113663	TEC	Gm48504	ENSMUST00000223066	TEC		12	1	14653662	5194
ENSMUSG00000038319	protein_coding	Kcnh2	ENSMUST00000036092	protein_coding	principal1	5	-1	24351604	4221
ENSMUSG00000068860	protein_coding	Gm128	ENSMUST00000107197	protein_coding		3	-1	95241598	1289
ENSMUSG00000034243	protein_coding	Golgb1	ENSMUST00000023534	protein_coding		16	1	36875141	498
ENSMUSG00000101044	unprocessed_pseudogene	Gm28420	ENSMUST00000187340	unprocessed_pseudogene		Y	-1	79179164	615
ENSMUSG00000108082	processed_pseudogene	Gm5314	ENSMUST00000204852	processed_pseudogene		6	1	99770657	466
ENSMUSG00000113042	TEC	Gm47188	ENSMUST00000220902	TEC		12	1	110083820	1361
ENSMUSG00000116908	TEC	Gm49599	ENSMUST00000135406	TEC		16	1	36875140	5095
ENSMUSG00000031578	protein_coding	Mak16	ENSMUST00000033983	protein_coding	principal1	8	-1	31168764	1902
ENSMUSG00000114066	processed_pseudogene	Gm9202	ENSMUST00000223036	processed_pseudogene		12	1	14930107	437
ENSMUSG00000113868	lincRNA	Gm34719	ENSMUST00000222231	lincRNA		12	-1	110086423	382
ENSMUSG00000107713	processed_pseudogene	Gm6681	ENSMUST00000205215	processed_pseudogene		6	-1	99840314	607
ENSMUSG00000113217	processed_pseudogene	Gm47187	ENSMUST00000220598	processed_pseudogene		12	1	110062270	229
ENSMUSG00000035420	protein_coding	Fam170a	ENSMUST00000236949	nonsense_mediated_decay		18	1	50278371	1223
ENSMUSG00000105091	processed_pseudogene	Gm43722	ENSMUST00000196054	processed_pseudogene		5	1	23376496	124
ENSMUSG00000038319	protein_coding	Kcnh2	ENSMUST00000129246	processed_transcript		5	-1	24322254	741
ENSMUSG00000035420	protein_coding	Fam170a	ENSMUST00000238078	protein_coding	alternative2	18	1	50278371	1394
ENSMUSG00000099670	unprocessed_pseudogene	Gm28423	ENSMUST00000190701	unprocessed_pseudogene		Y	-1	79216038	696
ENSMUSG00000038319	protein_coding	Kcnh2	ENSMUST00000126791	processed_transcript		5	-1	24325789	710
ENSMUSG00000031578	protein_coding	Mak16	ENSMUST00000210278	retained_intron		8	-1	31168702	723
ENSMUSG00000038319	protein_coding	Kcnh2	ENSMUST00000142197	processed_transcript		5	-1	24326519	605
ENSMUSG00000031578	protein_coding	Mak16	ENSMUST00000210450	retained_intron		8	-1	31168694	575
ENSMUSG00000098382	unprocessed_pseudogene	Gtpbp4-ps4	ENSMUST00000184813	unprocessed_pseudogene		7	-1	15087026	258
ENSMUSG00000099636	lincRNA	Gm28422	ENSMUST00000186112	lincRNA		Y	1	79257493	1500
ENSMUSG00000031578	protein_coding	Mak16	ENSMUST00000209991	retained_intron		8	-1	31168763	757
ENSMUSG00000084834	antisense	4930565N06Rik	ENSMUST00000153572	antisense		16	-1	36897189	2416
ENSMUSG00000099298	unprocessed_pseudogene	Ranbp2-ps6	ENSMUST00000183722	unprocessed_pseudogene		7	-1	15118384	381
ENSMUSG00000068264	protein_coding	Ap5s1	ENSMUST00000143546	processed_transcript		2	1	131207078	254
ENSMUSG00000099636	lincRNA	Gm28422	ENSMUST00000186849	lincRNA		Y	1	79257947	438
ENSMUSG00000094416	unprocessed_pseudogene	Obox4-ps11	ENSMUST00000176150	unprocessed_pseudogene		7	1	15129168	724
ENSMUSG00000040017	protein_coding	Saa4	ENSMUST00000006952	protein_coding	principal1	7	-1	46732603	2094
ENSMUSG00000021685	protein_coding	Otp	ENSMUST00000022195	protein_coding	principal1	13	1	94875602	2656
ENSMUSG00000117258	processed_pseudogene	Gm7773	ENSMUST00000233965	processed_pseudogene		17	1	23642237	315
ENSMUSG00000026170	protein_coding	Cyp27a1	ENSMUST00000027356	protein_coding	principal1	1	1	74713574	1892
ENSMUSG00000045664	protein_coding	Cdc42ep2	ENSMUST00000055458	protein_coding	principal1	19	-1	5924816	3411
ENSMUSG00000109624	unprocessed_pseudogene	Saa-ps	ENSMUST00000211148	unprocessed_pseudogene		7	-1	46736671	320
ENSMUSG00000021685	protein_coding	Otp	ENSMUST00000184985	processed_transcript		13	1	94882600	688
ENSMUSG00000095952	unprocessed_pseudogene	Obox4-ps12	ENSMUST00000180084	unprocessed_pseudogene		7	1	15139546	1362
ENSMUSG00000026170	protein_coding	Cyp27a1	ENSMUST00000190781	retained_intron		1	1	74735351	645
ENSMUSG00000095974	unprocessed_pseudogene	Obox4-ps13	ENSMUST00000180123	unprocessed_pseudogene		7	1	15150915	1137
ENSMUSG00000074115	protein_coding	Saa1	ENSMUST00000210547	retained_intron		7	-1	46742942	2446
ENSMUSG00000068264	protein_coding	Ap5s1	ENSMUST00000153097	protein_coding		2	1	131207086	351
ENSMUSG00000026170	protein_coding	Cyp27a1	ENSMUST00000189083	retained_intron		1	1	74736809	784
ENSMUSG00000034111	protein_coding	Tmed8	ENSMUST00000037418	protein_coding	principal1	12	-1	87200454	7409
ENSMUSG00000083967	processed_pseudogene	Gm15115	ENSMUST00000121145	processed_pseudogene		7	1	103829636	264
ENSMUSG00000068264	protein_coding	Ap5s1	ENSMUST00000134086	processed_transcript		2	1	131210370	868
ENSMUSG00000068264	protein_coding	Ap5s1	ENSMUST00000153901	processed_transcript		2	1	131210397	429
ENSMUSG00000090812	protein_coding	Samd15	ENSMUST00000183251	retained_intron		12	1	87199723	654
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000170617	nonsense_mediated_decay		17	-1	32388644	6426
ENSMUSG00000063063	protein_coding	Ctnna2	ENSMUST00000161846	protein_coding		6	-1	77979699	4018
ENSMUSG00000090812	protein_coding	Samd15	ENSMUST00000183118	processed_transcript		12	1	87199767	449
ENSMUSG00000090839	antisense	Gm17094	ENSMUST00000169881	antisense		4	-1	39450249	3334
ENSMUSG00000087001	antisense	Gm15475	ENSMUST00000137673	antisense		6	-1	84107007	3757
ENSMUSG00000093623	unprocessed_pseudogene	Obox4-ps14	ENSMUST00000177198	unprocessed_pseudogene		7	1	15162246	1127
ENSMUSG00000096414	unprocessed_pseudogene	Obox4-ps15	ENSMUST00000178057	unprocessed_pseudogene		7	1	15173325	1140
ENSMUSG00000024177	protein_coding	Nme4	ENSMUST00000025007	protein_coding	principal2	17	-1	26095602	1006
ENSMUSG00000063063	protein_coding	Ctnna2	ENSMUST00000160894	protein_coding		6	-1	77979699	4162
ENSMUSG00000024177	protein_coding	Nme4	ENSMUST00000236547	protein_coding	alternative2	17	-1	26095473	926
ENSMUSG00000090812	protein_coding	Samd15	ENSMUST00000182869	protein_coding	principal1	12	1	87200543	2031
ENSMUSG00000094412	unprocessed_pseudogene	Obox4-ps16	ENSMUST00000177624	unprocessed_pseudogene		7	1	15184668	1137
ENSMUSG00000090812	protein_coding	Samd15	ENSMUST00000169669	protein_coding		12	1	87200750	1194
ENSMUSG00000035212	protein_coding	Leprot	ENSMUST00000030254	protein_coding	principal1	4	1	101647718	1898
ENSMUSG00000024177	protein_coding	Nme4	ENSMUST00000236112	retained_intron		17	-1	26095473	1176
ENSMUSG00000074115	protein_coding	Saa1	ENSMUST00000128088	protein_coding	principal1	7	-1	46742980	609
ENSMUSG00000084319	processed_pseudogene	Tpt1-ps3	ENSMUST00000121046	processed_pseudogene		6	-1	99878334	519
ENSMUSG00000024177	protein_coding	Nme4	ENSMUST00000236128	protein_coding		17	-1	26095489	638
ENSMUSG00000052539	protein_coding	Magi3	ENSMUST00000064371	protein_coding	principal3	3	-1	104220374	6640
ENSMUSG00000035212	protein_coding	Leprot	ENSMUST00000106927	protein_coding		4	1	101647793	1754
ENSMUSG00000024177	protein_coding	Nme4	ENSMUST00000150280	retained_intron		17	-1	26095485	995
ENSMUSG00000105452	processed_pseudogene	Gm5276	ENSMUST00000196683	processed_pseudogene		3	1	57362388	1047
ENSMUSG00000026784	protein_coding	Pdss1	ENSMUST00000053729	protein_coding	principal1	2	1	22895522	1642
ENSMUSG00000063063	protein_coding	Ctnna2	ENSMUST00000159626	protein_coding	principal3	6	-1	77979550	3908
ENSMUSG00000113481	unprocessed_pseudogene	Gm48388	ENSMUST00000222056	unprocessed_pseudogene		12	1	87980012	213
ENSMUSG00000113103	unprocessed_pseudogene	Gm48389	ENSMUST00000222774	unprocessed_pseudogene		12	1	87973529	229
ENSMUSG00000113854	transcribed_processed_pseudogene	Gm2099	ENSMUST00000223310	processed_transcript		12	1	87985619	3341
ENSMUSG00000028287	protein_coding	1700009N14Rik	ENSMUST00000029955	protein_coding	principal1	4	1	39450295	1258
ENSMUSG00000023903	protein_coding	Mmp25	ENSMUST00000024696	protein_coding	principal1	17	-1	23645277	4528
ENSMUSG00000113854	transcribed_processed_pseudogene	Gm2099	ENSMUST00000220979	transcribed_processed_pseudogene		12	1	87988194	412
ENSMUSG00000063063	protein_coding	Ctnna2	ENSMUST00000162991	retained_intron		6	-1	76902888	684
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000022462	protein_coding	principal1	14	1	32085413	2376
ENSMUSG00000052539	protein_coding	Magi3	ENSMUST00000121198	protein_coding	alternative2	3	-1	104220103	5912
ENSMUSG00000063063	protein_coding	Ctnna2	ENSMUST00000204527	nonsense_mediated_decay		6	-1	77143943	1105
ENSMUSG00000026784	protein_coding	Pdss1	ENSMUST00000152170	protein_coding		2	1	22895595	1538
ENSMUSG00000093961	unprocessed_pseudogene	Obox4-ps17	ENSMUST00000178341	unprocessed_pseudogene		7	1	15195981	1137
ENSMUSG00000082302	processed_pseudogene	Gm12385	ENSMUST00000117439	processed_pseudogene		4	1	39767618	795
ENSMUSG00000079495	protein_coding	Nat8f6	ENSMUST00000174143	protein_coding	principal1	6	-1	85820954	1571
ENSMUSG00000113360	unprocessed_pseudogene	Gm48355	ENSMUST00000221231	unprocessed_pseudogene		12	1	18186151	581
ENSMUSG00000094967	unprocessed_pseudogene	Obox4-ps18	ENSMUST00000179441	unprocessed_pseudogene		7	1	15207312	1137
ENSMUSG00000063063	protein_coding	Ctnna2	ENSMUST00000162273	protein_coding		6	-1	77979560	3277
ENSMUSG00000093940	unprocessed_pseudogene	Obox4-ps19	ENSMUST00000178284	unprocessed_pseudogene		7	1	15218640	1140
ENSMUSG00000073198	transcribed_processed_pseudogene	Bnip3l-ps	ENSMUST00000220709	processed_transcript		12	1	18216542	1132
ENSMUSG00000063063	protein_coding	Ctnna2	ENSMUST00000160252	processed_transcript		6	-1	77979585	418
ENSMUSG00000073198	transcribed_processed_pseudogene	Bnip3l-ps	ENSMUST00000101577	transcribed_processed_pseudogene		12	1	18216598	657
ENSMUSG00000063063	protein_coding	Ctnna2	ENSMUST00000075340	protein_coding	alternative1	6	-1	77979560	2864
ENSMUSG00000052539	protein_coding	Magi3	ENSMUST00000122303	protein_coding	principal3	3	-1	104220238	3827
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000227845	nonsense_mediated_decay		14	1	32085785	769
ENSMUSG00000008373	protein_coding	Prpf31	ENSMUST00000008517	protein_coding	principal1	7	1	3629985	3144
ENSMUSG00000083271	processed_pseudogene	Gm12384	ENSMUST00000119228	processed_pseudogene		4	1	39823430	919
ENSMUSG00000023903	protein_coding	Mmp25	ENSMUST00000233276	nonsense_mediated_decay		17	-1	23645243	4401
ENSMUSG00000107707	TEC	Gm44286	ENSMUST00000204098	TEC		6	-1	77588481	1487
ENSMUSG00000068264	protein_coding	Ap5s1	ENSMUST00000110210	protein_coding		2	1	131210424	1101
ENSMUSG00000052539	protein_coding	Magi3	ENSMUST00000199201	retained_intron		3	-1	104062263	1805
ENSMUSG00000096797	unprocessed_pseudogene	Obox4-ps20	ENSMUST00000179591	unprocessed_pseudogene		7	1	15229944	1140
ENSMUSG00000106371	sense_intronic	9530097N15Rik	ENSMUST00000197819	sense_intronic		3	-1	104079502	1068
ENSMUSG00000108057	TEC	Gm44234	ENSMUST00000204246	TEC		6	-1	77324805	900
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000165523	nonsense_mediated_decay		14	1	32085787	840
ENSMUSG00000105846	sense_intronic	Gm43258	ENSMUST00000200312	sense_intronic		3	-1	104151705	1950
ENSMUSG00000082022	processed_pseudogene	Gm12386	ENSMUST00000117380	processed_pseudogene		4	-1	39844874	688
ENSMUSG00000008373	protein_coding	Prpf31	ENSMUST00000143231	retained_intron		7	1	3629992	827
ENSMUSG00000117123	lincRNA	Gm49890	ENSMUST00000233522	lincRNA		4	-1	88938521	1087
ENSMUSG00000023903	protein_coding	Mmp25	ENSMUST00000233764	nonsense_mediated_decay		17	-1	23644977	3253
ENSMUSG00000105083	sense_intronic	Gm42699	ENSMUST00000198104	sense_intronic		3	-1	104115695	1657
ENSMUSG00000117251	lincRNA	Gm49891	ENSMUST00000232991	lincRNA		4	-1	89039192	1332
ENSMUSG00000028344	protein_coding	Invs	ENSMUST00000030029	protein_coding	principal1	4	1	48279802	5633
ENSMUSG00000095922	unprocessed_pseudogene	Obox4-ps21	ENSMUST00000179856	unprocessed_pseudogene		7	1	15241272	1140
ENSMUSG00000117108	processed_pseudogene	Gm49935	ENSMUST00000233781	processed_pseudogene		17	1	23636596	144
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000164868	nonsense_mediated_decay		14	1	32085811	1864
ENSMUSG00000079495	protein_coding	Nat8f6	ENSMUST00000087656	protein_coding	principal1	6	-1	85809863	925
ENSMUSG00000084220	processed_pseudogene	Gm12387	ENSMUST00000118573	processed_pseudogene		4	-1	39896162	955
ENSMUSG00000038569	protein_coding	Rad9b	ENSMUST00000117263	protein_coding		5	-1	122354232	2371
ENSMUSG00000094243	unprocessed_pseudogene	Obox4-ps22	ENSMUST00000179602	unprocessed_pseudogene		7	1	15252612	1137
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000170600	protein_coding		14	1	32085826	717
ENSMUSG00000008373	protein_coding	Prpf31	ENSMUST00000125782	nonsense_mediated_decay		7	1	3630059	2731
ENSMUSG00000028344	protein_coding	Invs	ENSMUST00000149555	processed_transcript		4	1	48279816	4044
ENSMUSG00000038569	protein_coding	Rad9b	ENSMUST00000149600	protein_coding		5	-1	122351294	717
ENSMUSG00000047352	protein_coding	Olfr976	ENSMUST00000217630	protein_coding	alternative2	9	-1	39959705	2952
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000168986	protein_coding		14	1	32085834	668
ENSMUSG00000028344	protein_coding	Invs	ENSMUST00000143433	nonsense_mediated_decay		4	1	48279826	3227
ENSMUSG00000028356	protein_coding	Ambp	ENSMUST00000030041	protein_coding	principal1	4	-1	63154173	1268
ENSMUSG00000101656	processed_pseudogene	Gm8004	ENSMUST00000187782	processed_pseudogene		1	1	105615742	617
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000169078	retained_intron		14	1	32085834	4086
ENSMUSG00000008373	protein_coding	Prpf31	ENSMUST00000108636	protein_coding		7	1	3630557	1798
ENSMUSG00000113993	processed_pseudogene	Gm47659	ENSMUST00000222229	processed_pseudogene		13	1	18973460	682
ENSMUSG00000113378	processed_pseudogene	Gm47660	ENSMUST00000220695	processed_pseudogene		13	-1	19071575	379
ENSMUSG00000114080	antisense	Gm47661	ENSMUST00000221738	antisense		13	-1	19057896	1033
ENSMUSG00000113028	processed_pseudogene	Gm18065	ENSMUST00000221395	processed_pseudogene		13	1	18983930	526
ENSMUSG00000047352	protein_coding	Olfr976	ENSMUST00000213171	protein_coding	alternative2	9	-1	39961133	2998
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000169649	protein_coding		14	1	32085877	399
ENSMUSG00000008373	protein_coding	Prpf31	ENSMUST00000134047	retained_intron		7	1	3636095	660
ENSMUSG00000044496	protein_coding	2510039O18Rik	ENSMUST00000103232	protein_coding	principal1	4	1	147940895	2731
ENSMUSG00000028356	protein_coding	Ambp	ENSMUST00000142901	protein_coding		4	-1	63154799	375
ENSMUSG00000047352	protein_coding	Olfr976	ENSMUST00000217360	protein_coding	alternative2	9	-1	39957069	1164
ENSMUSG00000028344	protein_coding	Invs	ENSMUST00000129480	processed_transcript		4	1	48382188	740
ENSMUSG00000040370	protein_coding	Etfrf1	ENSMUST00000111725	protein_coding	principal1	6	1	145211134	872
ENSMUSG00000113576	antisense	Gm47658	ENSMUST00000222669	antisense		13	-1	18974997	394
ENSMUSG00000101214	sense_overlapping	Gm28403	ENSMUST00000188743	sense_overlapping		1	-1	105569139	2710
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000170519	nonsense_mediated_decay		14	1	32095399	821
ENSMUSG00000059554	protein_coding	Ccdc28a	ENSMUST00000080860	protein_coding	principal2	10	-1	18234996	1190
ENSMUSG00000008373	protein_coding	Prpf31	ENSMUST00000179769	protein_coding		7	1	3629985	3125
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000171849	protein_coding		14	1	32095462	344
ENSMUSG00000079494	protein_coding	Nat8f5	ENSMUST00000032074	protein_coding	principal1	6	-1	85820972	986
ENSMUSG00000047352	protein_coding	Olfr976	ENSMUST00000169307	protein_coding	principal2	9	-1	39957069	2813
ENSMUSG00000021906	protein_coding	Oxnad1	ENSMUST00000164396	retained_intron		14	1	32100818	303
ENSMUSG00000101219	processed_pseudogene	Gm20302	ENSMUST00000080671	processed_pseudogene		1	1	105574537	275
ENSMUSG00000059554	protein_coding	Ccdc28a	ENSMUST00000174592	protein_coding	alternative2	10	-1	18227473	882
ENSMUSG00000100672	sense_intronic	Gm28404	ENSMUST00000190242	sense_intronic		1	-1	105564578	453
ENSMUSG00000115141	lincRNA	Gm49256	ENSMUST00000227187	lincRNA		14	1	52023284	825
ENSMUSG00000059554	protein_coding	Ccdc28a	ENSMUST00000174631	retained_intron		10	-1	18216335	480
ENSMUSG00000068264	protein_coding	Ap5s1	ENSMUST00000089506	protein_coding		2	1	131210440	1432
ENSMUSG00000059554	protein_coding	Ccdc28a	ENSMUST00000173962	protein_coding		10	-1	18219614	338
ENSMUSG00000059554	protein_coding	Ccdc28a	ENSMUST00000173243	protein_coding	alternative2	10	-1	18234998	590
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000097393	protein_coding	principal1	17	1	15041208	2535
ENSMUSG00000106832	TEC	Gm42632	ENSMUST00000201707	TEC		5	1	67427993	2411
ENSMUSG00000057465	protein_coding	Saa2	ENSMUST00000210769	protein_coding	principal1	7	1	46751790	652
ENSMUSG00000059554	protein_coding	Ccdc28a	ENSMUST00000052648	protein_coding	alternative2	10	-1	18234978	2255
ENSMUSG00000038569	protein_coding	Rad9b	ENSMUST00000049009	protein_coding	principal1	5	-1	122354233	1631
ENSMUSG00000068264	protein_coding	Ap5s1	ENSMUST00000110208	protein_coding	principal1	2	1	131210440	1521
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000226488	retained_intron		17	1	15041615	793
ENSMUSG00000097840	antisense	Gm26756	ENSMUST00000181689	antisense		5	1	67427680	1294
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000226599	protein_coding		17	1	15041634	788
ENSMUSG00000044286	protein_coding	Olfr221	ENSMUST00000216188	protein_coding	principal1	14	-1	52039901	2871
ENSMUSG00000068264	protein_coding	Ap5s1	ENSMUST00000110206	protein_coding		2	1	131210604	703
ENSMUSG00000028345	protein_coding	Tex10	ENSMUST00000155905	nonsense_mediated_decay		4	-1	48468924	2547
ENSMUSG00000044286	protein_coding	Olfr221	ENSMUST00000214071	protein_coding	principal1	14	-1	52039855	3044
ENSMUSG00000038569	protein_coding	Rad9b	ENSMUST00000144268	protein_coding		5	-1	122352785	494
ENSMUSG00000057465	protein_coding	Saa2	ENSMUST00000210272	protein_coding		7	1	46751833	511
ENSMUSG00000044286	protein_coding	Olfr221	ENSMUST00000216907	protein_coding	principal1	14	-1	52039853	2859
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000228518	protein_coding		17	1	15041640	366
ENSMUSG00000044286	protein_coding	Olfr221	ENSMUST00000052560	protein_coding	principal1	14	-1	52042459	2741
ENSMUSG00000057465	protein_coding	Saa2	ENSMUST00000075982	protein_coding	principal1	7	1	46751833	606
ENSMUSG00000106269	lincRNA	4930580E04Rik	ENSMUST00000197377	lincRNA		5	1	23387109	690
ENSMUSG00000040370	protein_coding	Etfrf1	ENSMUST00000111726	protein_coding	principal1	6	1	145211156	1374
ENSMUSG00000038569	protein_coding	Rad9b	ENSMUST00000200653	retained_intron		5	-1	122354220	1726
ENSMUSG00000021905	protein_coding	Dph3	ENSMUST00000022461	protein_coding	principal1	14	-1	32085609	1057
ENSMUSG00000105042	TEC	Gm42509	ENSMUST00000197390	TEC		5	1	23396103	781
ENSMUSG00000092060	protein_coding	Bend4	ENSMUST00000201705	protein_coding		5	-1	67427330	9075
ENSMUSG00000057465	protein_coding	Saa2	ENSMUST00000211766	retained_intron		7	1	46751871	2443
ENSMUSG00000044286	protein_coding	Olfr221	ENSMUST00000214342	protein_coding	principal1	14	-1	52036143	1062
ENSMUSG00000040370	protein_coding	Etfrf1	ENSMUST00000039729	protein_coding	principal1	6	1	145211156	2436
ENSMUSG00000113533	processed_pseudogene	Gm46992	ENSMUST00000222120	processed_pseudogene		12	-1	87994707	1389
ENSMUSG00000021905	protein_coding	Dph3	ENSMUST00000067955	protein_coding	principal1	14	-1	32085609	2953
ENSMUSG00000111073	polymorphic_pseudogene	Olfr977-ps1	ENSMUST00000217438	polymorphic_pseudogene	principal1	9	-1	39974821	943
ENSMUSG00000040370	protein_coding	Etfrf1	ENSMUST00000126007	processed_transcript		6	1	145211170	522
ENSMUSG00000073147	lincRNA	5031425E22Rik	ENSMUST00000185943	lincRNA		5	-1	23433324	1477
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000226384	nonsense_mediated_decay		17	1	15041643	854
ENSMUSG00000096049	protein_coding	Gm2075	ENSMUST00000180285	protein_coding	principal1	12	1	88011848	435
ENSMUSG00000117119	processed_pseudogene	Gm49854	ENSMUST00000233262	processed_pseudogene		17	-1	41006306	259
ENSMUSG00000117272	processed_pseudogene	Gm49855	ENSMUST00000233335	processed_pseudogene		17	-1	41060057	406
ENSMUSG00000096803	protein_coding	Gm6803	ENSMUST00000178301	protein_coding	principal1	12	-1	88018771	435
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000226213	protein_coding		17	1	15041673	716
ENSMUSG00000021905	protein_coding	Dph3	ENSMUST00000112001	nonsense_mediated_decay		14	-1	32085609	3079
ENSMUSG00000095717	protein_coding	Gm2056	ENSMUST00000178852	protein_coding	principal1	12	1	88027004	435
ENSMUSG00000092060	protein_coding	Bend4	ENSMUST00000202131	nonsense_mediated_decay		5	-1	67427617	7349
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000227548	processed_transcript		17	1	15041713	244
ENSMUSG00000040370	protein_coding	Etfrf1	ENSMUST00000111723	protein_coding	principal1	6	1	145211175	842
ENSMUSG00000044292	protein_coding	Olfr978	ENSMUST00000217600	protein_coding	principal1	9	1	39992113	1790
ENSMUSG00000073147	lincRNA	5031425E22Rik	ENSMUST00000188328	lincRNA		5	-1	23433336	828
ENSMUSG00000092060	protein_coding	Bend4	ENSMUST00000201528	nonsense_mediated_decay		5	-1	67427617	7278
ENSMUSG00000114109	processed_pseudogene	Gm18629	ENSMUST00000222496	processed_pseudogene		12	1	88028811	884
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000226561	protein_coding		17	1	15042248	1019
ENSMUSG00000040370	protein_coding	Etfrf1	ENSMUST00000111724	protein_coding	principal1	6	1	145211175	1618
ENSMUSG00000113658	processed_pseudogene	Gm46993	ENSMUST00000220708	processed_pseudogene		12	-1	88036798	259
ENSMUSG00000073147	lincRNA	5031425E22Rik	ENSMUST00000191186	lincRNA		5	-1	23433309	719
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000227786	retained_intron		17	1	15044395	427
ENSMUSG00000021922	protein_coding	Itih4	ENSMUST00000120269	protein_coding	principal3	14	1	30886476	3531
ENSMUSG00000040370	protein_coding	Etfrf1	ENSMUST00000111721	protein_coding	principal1	6	1	145211186	1336
ENSMUSG00000044292	protein_coding	Olfr978	ENSMUST00000057161	protein_coding	principal1	9	1	39993812	936
ENSMUSG00000113401	processed_pseudogene	Gm18247	ENSMUST00000222937	processed_pseudogene		12	1	88040682	601
ENSMUSG00000073147	lincRNA	5031425E22Rik	ENSMUST00000189045	lincRNA		5	-1	23434269	1983
ENSMUSG00000073147	lincRNA	5031425E22Rik	ENSMUST00000101522	lincRNA		5	-1	23433919	2110
ENSMUSG00000104765	processed_pseudogene	Gm43058	ENSMUST00000197645	processed_pseudogene		5	-1	23388244	625
ENSMUSG00000021905	protein_coding	Dph3	ENSMUST00000124303	protein_coding		14	-1	32085729	809
ENSMUSG00000092060	protein_coding	Bend4	ENSMUST00000201972	protein_coding	principal1	5	-1	67428310	8268
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000226464	retained_intron		17	1	15049200	598
ENSMUSG00000040370	protein_coding	Etfrf1	ENSMUST00000111719	protein_coding	principal1	6	1	145211200	968
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000227177	retained_intron		17	1	15050283	664
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000227545	retained_intron		17	1	15050345	553
ENSMUSG00000086948	antisense	Gm14697	ENSMUST00000147144	antisense		X	-1	49447972	648
ENSMUSG00000062017	protein_coding	Abca14	ENSMUST00000143257	processed_transcript		7	1	120203961	2655
ENSMUSG00000107756	TEC	Gm44164	ENSMUST00000203605	TEC		6	-1	145241227	2561
ENSMUSG00000092060	protein_coding	Bend4	ENSMUST00000169190	protein_coding	principal1	5	-1	67427799	7935
ENSMUSG00000021905	protein_coding	Dph3	ENSMUST00000167796	processed_transcript		14	-1	32085692	591
ENSMUSG00000087369	lincRNA	Gm14696	ENSMUST00000144294	lincRNA		X	-1	49345237	3976
ENSMUSG00000028467	protein_coding	Gba2	ENSMUST00000030189	protein_coding	principal1	4	-1	43578873	3544
ENSMUSG00000117062	processed_pseudogene	Ldha-ps3	ENSMUST00000232966	processed_pseudogene		17	1	41101038	949
ENSMUSG00000021905	protein_coding	Dph3	ENSMUST00000144149	retained_intron		14	-1	32085286	751
ENSMUSG00000028467	protein_coding	Gba2	ENSMUST00000148426	retained_intron		4	-1	43578089	3130
ENSMUSG00000021905	protein_coding	Dph3	ENSMUST00000112000	retained_intron		14	-1	32085609	486
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000183583	nonsense_mediated_decay		2	-1	29248125	1957
ENSMUSG00000117210	lincRNA	Gm49857	ENSMUST00000233396	lincRNA		17	1	41071123	756
ENSMUSG00000030004	protein_coding	Nat8	ENSMUST00000032073	protein_coding	principal1	6	-1	85832082	1123
ENSMUSG00000028467	protein_coding	Gba2	ENSMUST00000139606	retained_intron		4	-1	43569642	780
ENSMUSG00000096792	unprocessed_pseudogene	Gm21956	ENSMUST00000179946	unprocessed_pseudogene		3	1	88376023	522
ENSMUSG00000028345	protein_coding	Tex10	ENSMUST00000030030	protein_coding	principal1	4	-1	48473459	3102
ENSMUSG00000028467	protein_coding	Gba2	ENSMUST00000144968	processed_transcript		4	-1	43574054	690
ENSMUSG00000028467	protein_coding	Gba2	ENSMUST00000130443	protein_coding		4	-1	43578636	979
ENSMUSG00000059473	protein_coding	Olfr979	ENSMUST00000215523	protein_coding	principal1	9	-1	40003465	3397
ENSMUSG00000024936	protein_coding	Kcnk7	ENSMUST00000052448	protein_coding	principal1	19	1	5704367	1226
ENSMUSG00000040078	processed_pseudogene	Ptges3-ps	ENSMUST00000160012	processed_pseudogene		6	1	85843980	480
ENSMUSG00000028345	protein_coding	Tex10	ENSMUST00000138531	retained_intron		4	-1	48459303	598
ENSMUSG00000059473	protein_coding	Olfr979	ENSMUST00000080835	protein_coding	principal1	9	-1	40001250	1045
ENSMUSG00000028345	protein_coding	Tex10	ENSMUST00000155750	processed_transcript		4	-1	48469996	551
ENSMUSG00000024936	protein_coding	Kcnk7	ENSMUST00000236818	protein_coding		19	1	5704971	1027
ENSMUSG00000024936	protein_coding	Kcnk7	ENSMUST00000235419	processed_transcript		19	1	5705021	1080
ENSMUSG00000028345	protein_coding	Tex10	ENSMUST00000132911	retained_intron		4	-1	48473343	942
ENSMUSG00000115736	processed_pseudogene	Gm8586	ENSMUST00000228203	processed_pseudogene		14	1	52069471	549
ENSMUSG00000098030	processed_pseudogene	Gm6771	ENSMUST00000182716	processed_pseudogene		17	1	41345997	1001
ENSMUSG00000021922	protein_coding	Itih4	ENSMUST00000078490	protein_coding	alternative2	14	1	30886502	2993
ENSMUSG00000033634	protein_coding	Nat8f2	ENSMUST00000045008	protein_coding	principal1	6	-1	85869158	3301
ENSMUSG00000115541	processed_pseudogene	Gm49258	ENSMUST00000227288	processed_pseudogene		14	-1	52071927	303
ENSMUSG00000028345	protein_coding	Tex10	ENSMUST00000164866	protein_coding	principal1	4	-1	48473422	3203
ENSMUSG00000021922	protein_coding	Itih4	ENSMUST00000006703	protein_coding	alternative2	14	1	30886502	2980
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000231568	processed_transcript		17	1	15052842	1342
ENSMUSG00000081953	processed_pseudogene	Gm12435	ENSMUST00000118949	processed_pseudogene		4	-1	48345230	1016
ENSMUSG00000106784	processed_pseudogene	Gm43309	ENSMUST00000200837	processed_pseudogene		6	1	85889326	458
ENSMUSG00000060254	protein_coding	Olfr980	ENSMUST00000216463	protein_coding	principal1	9	-1	40009582	3050
ENSMUSG00000021922	protein_coding	Itih4	ENSMUST00000168782	protein_coding	alternative2	14	1	30886521	2928
ENSMUSG00000060254	protein_coding	Olfr980	ENSMUST00000073932	protein_coding	principal1	9	-1	40006947	933
ENSMUSG00000117001	processed_pseudogene	Gm49858	ENSMUST00000232972	processed_pseudogene		17	-1	41663688	1296
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000231241	processed_transcript		17	1	15053059	1571
ENSMUSG00000021922	protein_coding	Itih4	ENSMUST00000227899	retained_intron		14	1	30899161	795
ENSMUSG00000094746	protein_coding	Gm20916	ENSMUST00000185338	protein_coding	principal1	Y	1	79319565	923
ENSMUSG00000024642	protein_coding	Tle4	ENSMUST00000052011	protein_coding	principal2	19	-1	14598051	4545
ENSMUSG00000024028	protein_coding	Tff2	ENSMUST00000024826	protein_coding	principal1	17	-1	31144282	584
ENSMUSG00000094746	protein_coding	Gm20916	ENSMUST00000178063	protein_coding		Y	1	79320997	498
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000228803	protein_coding		17	1	15056751	1271
ENSMUSG00000100494	unprocessed_pseudogene	Gm29033	ENSMUST00000189114	unprocessed_pseudogene		Y	-1	79406745	696
ENSMUSG00000024642	protein_coding	Tle4	ENSMUST00000235975	retained_intron		19	-1	14595539	1323
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000227252	nonsense_mediated_decay		17	1	15056751	572
ENSMUSG00000046678	protein_coding	Olfr981	ENSMUST00000215956	protein_coding	principal1	9	1	40021464	8197
ENSMUSG00000024642	protein_coding	Tle4	ENSMUST00000167776	protein_coding	alternative1	19	-1	14598051	4545
ENSMUSG00000028706	protein_coding	Nsun4	ENSMUST00000030475	protein_coding	principal1	4	-1	116053876	2439
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000187199	processed_transcript		17	1	15059454	827
ENSMUSG00000046678	protein_coding	Olfr981	ENSMUST00000219526	processed_transcript		9	1	40021464	2756
ENSMUSG00000046678	protein_coding	Olfr981	ENSMUST00000220338	processed_transcript		9	1	40021464	5377
ENSMUSG00000114124	processed_pseudogene	Gm19084	ENSMUST00000222939	processed_pseudogene		12	1	15102442	1762
ENSMUSG00000036552	protein_coding	Ermard	ENSMUST00000186130	processed_transcript		17	1	15065615	667
ENSMUSG00000113285	transcribed_processed_pseudogene	Gm36128	ENSMUST00000221563	transcribed_processed_pseudogene		12	1	15050629	685
ENSMUSG00000046678	protein_coding	Olfr981	ENSMUST00000059859	protein_coding	principal1	9	1	40022352	997
ENSMUSG00000113285	transcribed_processed_pseudogene	Gm36128	ENSMUST00000221065	processed_transcript		12	1	15051127	1656
ENSMUSG00000113285	transcribed_processed_pseudogene	Gm36128	ENSMUST00000222288	processed_transcript		12	1	15051675	1381
ENSMUSG00000074486	protein_coding	Bglap2	ENSMUST00000098956	protein_coding	principal1	3	-1	88378699	471
ENSMUSG00000113285	transcribed_processed_pseudogene	Gm36128	ENSMUST00000222816	processed_transcript		12	1	15068117	793
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000111349	protein_coding	principal1	2	1	91257329	1993
ENSMUSG00000078691	unprocessed_pseudogene	Gm6821	ENSMUST00000107540	unprocessed_pseudogene		3	1	88381772	542
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000059566	protein_coding	principal1	2	1	91256162	1867
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000144394	protein_coding		2	1	91256813	438
ENSMUSG00000030265	protein_coding	Kras	ENSMUST00000032399	protein_coding	principal2	6	-1	145250239	4678
ENSMUSG00000042256	protein_coding	Ptchd4	ENSMUST00000048691	protein_coding	principal2	17	1	42315947	4226
ENSMUSG00000027109	protein_coding	Sp3	ENSMUST00000102689	protein_coding	principal2	2	-1	72980446	4181
ENSMUSG00000113644	lincRNA	4930448C13Rik	ENSMUST00000221439	lincRNA		12	-1	15051573	712
ENSMUSG00000113644	lincRNA	4930448C13Rik	ENSMUST00000220891	lincRNA		12	-1	15051593	822
ENSMUSG00000042256	protein_coding	Ptchd4	ENSMUST00000233746	retained_intron		17	1	42315989	1129
ENSMUSG00000030265	protein_coding	Kras	ENSMUST00000123972	processed_transcript		6	-1	145230824	816
ENSMUSG00000028706	protein_coding	Nsun4	ENSMUST00000030474	nonsense_mediated_decay		4	-1	116048490	1984
ENSMUSG00000042256	protein_coding	Ptchd4	ENSMUST00000232968	protein_coding	alternative1	17	1	42316600	3918
ENSMUSG00000030265	protein_coding	Kras	ENSMUST00000203147	protein_coding		6	-1	145250239	817
ENSMUSG00000027109	protein_coding	Sp3	ENSMUST00000066003	protein_coding	alternative2	2	-1	72980426	3808
ENSMUSG00000074483	protein_coding	Bglap	ENSMUST00000076048	protein_coding	principal1	3	-1	88384433	440
ENSMUSG00000038582	protein_coding	Pptc7	ENSMUST00000053426	protein_coding	principal2	5	1	122284365	4644
ENSMUSG00000111553	processed_pseudogene	Gm18892	ENSMUST00000217628	processed_pseudogene		9	1	40039891	881
ENSMUSG00000074483	protein_coding	Bglap	ENSMUST00000128732	retained_intron		3	-1	88384464	351
ENSMUSG00000030265	protein_coding	Kras	ENSMUST00000111710	protein_coding	alternative1	6	-1	145250177	1194
ENSMUSG00000113644	lincRNA	4930448C13Rik	ENSMUST00000221781	lincRNA		12	-1	15050389	806
ENSMUSG00000113644	lincRNA	4930448C13Rik	ENSMUST00000221610	lincRNA		12	-1	15051546	1044
ENSMUSG00000116895	protein_coding	Gm3435	ENSMUST00000097395	protein_coding	principal1	17	1	15010176	1684
ENSMUSG00000091415	protein_coding	Ak9	ENSMUST00000173494	protein_coding	principal1	10	1	41303980	6968
ENSMUSG00000030265	protein_coding	Kras	ENSMUST00000156486	nonsense_mediated_decay		6	-1	145250170	832
ENSMUSG00000038582	protein_coding	Pptc7	ENSMUST00000119015	protein_coding	alternative2	5	1	122295772	2233
ENSMUSG00000113644	lincRNA	4930448C13Rik	ENSMUST00000220988	lincRNA		12	-1	15051598	441
ENSMUSG00000110822	processed_pseudogene	Gm18305	ENSMUST00000216532	processed_pseudogene		10	-1	41364964	2128
ENSMUSG00000062017	protein_coding	Abca14	ENSMUST00000084640	protein_coding	principal1	7	1	120203964	5384
ENSMUSG00000111601	processed_pseudogene	Gm18986	ENSMUST00000216029	processed_pseudogene		10	-1	41380881	1986
ENSMUSG00000116895	protein_coding	Gm3435	ENSMUST00000232446	protein_coding		17	1	15010335	1011
ENSMUSG00000030265	protein_coding	Kras	ENSMUST00000149314	retained_intron		6	-1	145225557	599
ENSMUSG00000023964	protein_coding	Calcr	ENSMUST00000171613	protein_coding	alternative2	6	-1	3763630	3518
ENSMUSG00000101118	processed_pseudogene	Gm29034	ENSMUST00000188099	processed_pseudogene		Y	-1	79443274	315
ENSMUSG00000111315	processed_pseudogene	Gm47473	ENSMUST00000214384	processed_pseudogene		10	-1	41403831	285
ENSMUSG00000027109	protein_coding	Sp3	ENSMUST00000133615	processed_transcript		2	-1	72979286	3870
ENSMUSG00000083909	processed_pseudogene	Gm15842	ENSMUST00000120513	processed_pseudogene		5	1	122302422	618
ENSMUSG00000030265	protein_coding	Kras	ENSMUST00000155145	protein_coding		6	-1	145250202	381
ENSMUSG00000101748	unprocessed_pseudogene	Gm21823	ENSMUST00000189122	unprocessed_pseudogene		Y	-1	79590961	696
ENSMUSG00000097372	lincRNA	Gm26876	ENSMUST00000180875	lincRNA		10	1	128645884	2387
ENSMUSG00000023964	protein_coding	Calcr	ENSMUST00000115622	protein_coding	alternative2	6	-1	3764714	3721
ENSMUSG00000027109	protein_coding	Sp3	ENSMUST00000129565	processed_transcript		2	-1	72941084	645
ENSMUSG00000083216	unprocessed_pseudogene	Hbb-bh3	ENSMUST00000118954	unprocessed_pseudogene		7	-1	103833723	266
ENSMUSG00000027109	protein_coding	Sp3	ENSMUST00000141372	processed_transcript		2	-1	72970466	655
ENSMUSG00000028706	protein_coding	Nsun4	ENSMUST00000165493	protein_coding		4	-1	116053380	3920
ENSMUSG00000079379	unprocessed_pseudogene	Gm3242	ENSMUST00000171273	unprocessed_pseudogene		14	-1	5899001	485
ENSMUSG00000084213	processed_pseudogene	Hspe1-ps5	ENSMUST00000118080	processed_pseudogene		2	1	72955898	297
ENSMUSG00000090927	processed_pseudogene	Gm17047	ENSMUST00000167709	processed_pseudogene		14	1	5930665	430
ENSMUSG00000062017	protein_coding	Abca14	ENSMUST00000130646	retained_intron		7	1	120204004	947
ENSMUSG00000028706	protein_coding	Nsun4	ENSMUST00000136655	processed_transcript		4	-1	116046960	649
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000028694	protein_coding	principal1	2	1	91256813	1862
ENSMUSG00000028706	protein_coding	Nsun4	ENSMUST00000152712	retained_intron		4	-1	116048359	315
ENSMUSG00000062017	protein_coding	Abca14	ENSMUST00000134268	processed_transcript		7	1	120204007	831
ENSMUSG00000028706	protein_coding	Nsun4	ENSMUST00000151720	processed_transcript		4	-1	116049396	327
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000156919	protein_coding		2	1	91256838	532
ENSMUSG00000062017	protein_coding	Abca14	ENSMUST00000207961	processed_transcript		7	1	120278550	191
ENSMUSG00000023964	protein_coding	Calcr	ENSMUST00000075644	protein_coding	principal4	6	-1	3764658	3763
ENSMUSG00000113180	processed_pseudogene	Gm46998	ENSMUST00000221444	processed_pseudogene		12	-1	88044712	330
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000131711	protein_coding		2	1	91257335	685
ENSMUSG00000023964	protein_coding	Calcr	ENSMUST00000168592	protein_coding	alternative2	6	-1	3752974	2064
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000087703	protein_coding		17	-1	32388885	4175
ENSMUSG00000023964	protein_coding	Calcr	ENSMUST00000170266	protein_coding	principal4	6	-1	3752974	2175
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000124658	processed_transcript		2	1	91259206	345
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000134699	protein_coding		2	1	91255954	882
ENSMUSG00000078621	protein_coding	Hbb-bh2	ENSMUST00000106866	protein_coding	principal1	7	-1	103840520	558
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000143883	retained_intron		2	1	91256115	903
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000126754	retained_intron		2	1	91260805	761
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000141313	retained_intron		2	1	91262913	514
ENSMUSG00000063714	antisense	Sp3os	ENSMUST00000135297	antisense		2	1	72979424	370
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000128684	protein_coding		2	1	91263106	806
ENSMUSG00000116953	protein_coding	9030025P20Rik	ENSMUST00000061688	protein_coding	principal1	17	1	14978468	1844
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000154959	protein_coding		2	1	91256144	447
ENSMUSG00000026928	protein_coding	Card9	ENSMUST00000153370	processed_transcript		2	-1	26352775	516
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000138470	protein_coding		2	1	91259829	671
ENSMUSG00000027257	protein_coding	Pacsin3	ENSMUST00000168916	protein_coding	principal1	2	1	91256813	1859
ENSMUSG00000063714	antisense	Sp3os	ENSMUST00000123087	antisense		2	1	72979424	583
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000163107	nonsense_mediated_decay		17	-1	32389439	4316
ENSMUSG00000063714	antisense	Sp3os	ENSMUST00000146195	antisense		2	1	72979516	364
ENSMUSG00000021314	protein_coding	Amph	ENSMUST00000239207	protein_coding	alternative2	13	1	18948205	3760
ENSMUSG00000063714	antisense	Sp3os	ENSMUST00000137941	antisense		2	1	72987241	628
ENSMUSG00000109107	antisense	Gm44781	ENSMUST00000208480	antisense		7	1	109142887	601
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000048455	protein_coding	principal4	2	-1	29248040	1770
ENSMUSG00000113331	lincRNA	3110009F21Rik	ENSMUST00000223217	lincRNA		12	-1	110158077	1625
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000102873	protein_coding	alternative2	2	-1	29248040	1593
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000091153	protein_coding	alternative2	2	-1	29248040	1695
ENSMUSG00000113733	lincRNA	Gm34785	ENSMUST00000222571	lincRNA		12	-1	110188061	4582
ENSMUSG00000052217	protein_coding	Hbb-bh1	ENSMUST00000063957	protein_coding	principal1	7	-1	103843164	613
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000186485	protein_coding		1	-1	105663662	6759
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000169488	protein_coding		17	-1	32364463	3578
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000147897	processed_transcript		2	-1	29204024	678
ENSMUSG00000021314	protein_coding	Amph	ENSMUST00000003345	protein_coding	principal3	13	1	18948205	3367
ENSMUSG00000023904	protein_coding	Hcfc1r1	ENSMUST00000180140	protein_coding	principal2	17	1	23673596	693
ENSMUSG00000021314	protein_coding	Amph	ENSMUST00000200466	protein_coding	alternative2	13	1	18948351	3224
ENSMUSG00000013353	protein_coding	4931406B18Rik	ENSMUST00000013497	protein_coding	principal2	7	-1	43505938	3970
ENSMUSG00000070576	protein_coding	Mn1	ENSMUST00000138784	processed_transcript		5	1	111417362	557
ENSMUSG00000005364	protein_coding	Il5ra	ENSMUST00000204659	protein_coding	principal1	6	-1	106749037	3575
ENSMUSG00000091275	protein_coding	Gm3248	ENSMUST00000163885	protein_coding	principal1	14	-1	5961745	2055
ENSMUSG00000095991	processed_pseudogene	Gm17048	ENSMUST00000179266	processed_pseudogene		14	1	5958445	847
ENSMUSG00000023904	protein_coding	Hcfc1r1	ENSMUST00000024697	protein_coding	principal2	17	1	23673608	946
ENSMUSG00000085700	unprocessed_pseudogene	Hbb-bh0	ENSMUST00000124800	unprocessed_pseudogene		7	-1	103850148	129
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000147274	processed_transcript		2	-1	29204922	513
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000143194	processed_transcript		2	-1	29204024	541
ENSMUSG00000005364	protein_coding	Il5ra	ENSMUST00000205004	protein_coding		6	-1	106748948	2271
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000064694	protein_coding		17	-1	32387759	2871
ENSMUSG00000076437	protein_coding	Selenoh	ENSMUST00000117299	protein_coding	principal2	2	-1	84670770	747
ENSMUSG00000023904	protein_coding	Hcfc1r1	ENSMUST00000179928	protein_coding	alternative2	17	1	23673627	597
ENSMUSG00000116953	protein_coding	9030025P20Rik	ENSMUST00000231253	retained_intron		17	1	14978877	2909
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000125765	processed_transcript		2	-1	29204922	436
ENSMUSG00000005364	protein_coding	Il5ra	ENSMUST00000167925	protein_coding	principal1	6	-1	106745109	1704
ENSMUSG00000013353	protein_coding	4931406B18Rik	ENSMUST00000168213	nonsense_mediated_decay		7	-1	43505632	1932
ENSMUSG00000116953	protein_coding	9030025P20Rik	ENSMUST00000231723	retained_intron		17	1	14978907	1586
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000071201	protein_coding		2	-1	29253005	1881
ENSMUSG00000036111	protein_coding	Lmo1	ENSMUST00000036992	protein_coding	principal3	7	-1	109170519	1282
ENSMUSG00000021314	protein_coding	Amph	ENSMUST00000200273	retained_intron		13	1	18948398	1756
ENSMUSG00000116953	protein_coding	9030025P20Rik	ENSMUST00000232182	retained_intron		17	1	14979499	2416
ENSMUSG00000113089	processed_pseudogene	Gm46997	ENSMUST00000222108	processed_pseudogene		12	-1	88046502	217
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000149096	processed_transcript		2	-1	29248132	690
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000190945	processed_transcript		1	-1	105568948	4031
ENSMUSG00000024907	protein_coding	Gal	ENSMUST00000237521	protein_coding	principal2	19	-1	3414544	788
ENSMUSG00000113838	processed_pseudogene	Gm46994	ENSMUST00000221523	processed_pseudogene		12	1	88058081	219
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000190139	processed_transcript		1	-1	105569165	1967
ENSMUSG00000070576	protein_coding	Mn1	ENSMUST00000094463	protein_coding	principal1	5	1	111417442	6860
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000067268	protein_coding	principal3	5	1	115506676	3706
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000236409	protein_coding	principal1	17	-1	32387759	5058
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000187537	protein_coding	principal5	1	-1	105663643	4006
ENSMUSG00000036111	protein_coding	Lmo1	ENSMUST00000207178	protein_coding	alternative1	7	-1	109175207	912
ENSMUSG00000013353	protein_coding	4931406B18Rik	ENSMUST00000171174	nonsense_mediated_decay		7	-1	43505927	2566
ENSMUSG00000113720	processed_pseudogene	Gm46995	ENSMUST00000223445	processed_pseudogene		12	1	88059093	1378
ENSMUSG00000026928	protein_coding	Card9	ENSMUST00000028294	protein_coding	principal1	2	-1	26360918	1880
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000169741	retained_intron		17	-1	32369452	812
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000190811	protein_coding	alternative2	1	-1	105663662	3015
ENSMUSG00000024907	protein_coding	Gal	ENSMUST00000025842	protein_coding	alternative2	19	-1	3414447	672
ENSMUSG00000013353	protein_coding	4931406B18Rik	ENSMUST00000163474	protein_coding		7	-1	43504222	726
ENSMUSG00000106560	TEC	Gm43119	ENSMUST00000196957	TEC		5	1	111423589	2122
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000165912	protein_coding		17	-1	32388586	773
ENSMUSG00000113938	processed_pseudogene	Gm46996	ENSMUST00000220924	processed_pseudogene		12	-1	88064775	408
ENSMUSG00000036111	protein_coding	Lmo1	ENSMUST00000208136	protein_coding	alternative1	7	-1	109170512	772
ENSMUSG00000113193	lincRNA	Gm40576	ENSMUST00000221773	lincRNA		12	-1	110236362	1152
ENSMUSG00000113419	processed_pseudogene	Gm5789	ENSMUST00000222643	processed_pseudogene		12	1	88066543	865
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000186195	protein_coding		1	-1	105638261	408
ENSMUSG00000076437	protein_coding	Selenoh	ENSMUST00000102647	protein_coding	principal2	2	-1	84670708	654
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000094002	protein_coding	alternative2	7	-1	134376828	2908
ENSMUSG00000013353	protein_coding	4931406B18Rik	ENSMUST00000168636	retained_intron		7	-1	43505933	1765
ENSMUSG00000026928	protein_coding	Card9	ENSMUST00000100303	protein_coding	principal1	2	-1	26359747	1947
ENSMUSG00000113783	processed_pseudogene	Gm18617	ENSMUST00000222311	processed_pseudogene		12	-1	88073195	259
ENSMUSG00000013353	protein_coding	4931406B18Rik	ENSMUST00000163619	protein_coding	alternative2	7	-1	43505940	1812
ENSMUSG00000076437	protein_coding	Selenoh	ENSMUST00000189636	protein_coding	alternative2	2	-1	84670676	499
ENSMUSG00000035513	protein_coding	Ntng2	ENSMUST00000177689	protein_coding	alternative2	2	-1	29248099	1679
ENSMUSG00000114075	protein_coding	Gm16368	ENSMUST00000222340	protein_coding	principal1	12	1	88083697	435
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000172216	retained_intron		17	-1	32388726	1485
ENSMUSG00000076437	protein_coding	Selenoh	ENSMUST00000102646	protein_coding	principal2	2	-1	84670697	783
ENSMUSG00000086779	processed_transcript	Gm13562	ENSMUST00000125198	processed_transcript		2	1	26352645	797
ENSMUSG00000021314	protein_coding	Amph	ENSMUST00000222698	processed_transcript		13	1	19064817	3082
ENSMUSG00000013353	protein_coding	4931406B18Rik	ENSMUST00000168883	protein_coding		7	-1	43505694	478
ENSMUSG00000013353	protein_coding	4931406B18Rik	ENSMUST00000191516	protein_coding	principal2	7	-1	43505927	2566
ENSMUSG00000086779	processed_transcript	Gm13562	ENSMUST00000137869	processed_transcript		2	1	26365497	687
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000169280	processed_transcript		17	-1	32388950	742
ENSMUSG00000067106	processed_pseudogene	Gm5529	ENSMUST00000165691	processed_pseudogene		1	-1	79923426	891
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000115420	protein_coding		6	1	17693947	2094
ENSMUSG00000079707	protein_coding	Tcte3	ENSMUST00000097398	protein_coding		17	-1	15041439	517
ENSMUSG00000111782	processed_pseudogene	Gm47091	ENSMUST00000216093	processed_pseudogene		10	-1	91640890	189
ENSMUSG00000076437	protein_coding	Selenoh	ENSMUST00000154179	retained_intron		2	-1	84670676	599
ENSMUSG00000106925	processed_pseudogene	Gm20072	ENSMUST00000202231	processed_pseudogene		5	1	67453479	292
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000171728	nonsense_mediated_decay		17	-1	32389376	2958
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000185983	retained_intron		1	-1	105663676	2564
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000172947	protein_coding	principal4	7	-1	134364884	2559
ENSMUSG00000021314	protein_coding	Amph	ENSMUST00000197545	processed_transcript		13	1	19119789	804
ENSMUSG00000079499	processed_transcript	6530402F18Rik	ENSMUST00000155949	processed_transcript		2	-1	29252993	4301
ENSMUSG00000076437	protein_coding	Selenoh	ENSMUST00000189988	protein_coding		2	-1	84670654	390
ENSMUSG00000106721	processed_pseudogene	Gm5442	ENSMUST00000202121	processed_pseudogene		12	1	88085311	2034
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000087699	retained_intron		17	-1	32389401	2781
ENSMUSG00000079499	processed_transcript	6530402F18Rik	ENSMUST00000154682	processed_transcript		2	-1	29253006	1739
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000238144	processed_transcript		17	-1	32387688	721
ENSMUSG00000113736	unprocessed_pseudogene	Gm40879	ENSMUST00000220759	unprocessed_pseudogene		12	1	18219929	612
ENSMUSG00000024050	protein_coding	Wiz	ENSMUST00000170603	protein_coding		17	-1	32389116	544
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000106129	protein_coding	alternative2	7	-1	134341986	1306
ENSMUSG00000079499	processed_transcript	6530402F18Rik	ENSMUST00000028141	processed_transcript		2	-1	29253006	1737
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000191408	retained_intron		1	-1	105663677	1362
ENSMUSG00000081524	processed_pseudogene	Gm11658	ENSMUST00000120913	processed_pseudogene		11	-1	109160194	1008
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000206005	retained_intron		7	-1	134268840	2027
ENSMUSG00000079707	protein_coding	Tcte3	ENSMUST00000040746	protein_coding	principal1	17	-1	15041488	720
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000174700	protein_coding		7	-1	134348916	293
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000188858	retained_intron		1	-1	105649651	532
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000238294	protein_coding		7	-1	134498984	941
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000023455	protein_coding	principal1	16	-1	17111257	2333
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000187909	retained_intron		1	-1	105663673	996
ENSMUSG00000025875	protein_coding	Tspan17	ENSMUST00000026993	protein_coding	principal2	13	1	54789377	1585
ENSMUSG00000035595	protein_coding	Fam174c	ENSMUST00000041882	protein_coding	principal1	10	1	80172944	678
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000185209	retained_intron		1	-1	105663672	362
ENSMUSG00000059898	protein_coding	Dsc3	ENSMUST00000115848	protein_coding	alternative2	18	-1	20002082	5333
ENSMUSG00000056536	protein_coding	Pign	ENSMUST00000070699	protein_coding		1	-1	105659008	6528
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000164458	protein_coding	principal1	16	-1	17111213	2190
ENSMUSG00000030110	protein_coding	Ret	ENSMUST00000032201	protein_coding	principal3	6	-1	118197133	5456
ENSMUSG00000116998	processed_pseudogene	Gm21050	ENSMUST00000231232	processed_pseudogene		16	-1	56337378	1020
ENSMUSG00000031095	protein_coding	Cul4b	ENSMUST00000016681	protein_coding	alternative2	X	-1	38564525	3354
ENSMUSG00000043895	protein_coding	S1pr2	ENSMUST00000054197	protein_coding	principal1	9	-1	20976781	6394
ENSMUSG00000059898	protein_coding	Dsc3	ENSMUST00000225110	protein_coding	principal2	18	-1	20001955	3123
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000173195	protein_coding		7	-1	134376831	483
ENSMUSG00000043895	protein_coding	S1pr2	ENSMUST00000216499	processed_transcript		9	-1	20973978	419
ENSMUSG00000116780	protein_coding	Gm3417	ENSMUST00000231584	protein_coding		17	-1	14978693	459
ENSMUSG00000025875	protein_coding	Tspan17	ENSMUST00000131692	protein_coding		13	1	54789403	1048
ENSMUSG00000059898	protein_coding	Dsc3	ENSMUST00000223946	protein_coding		18	-1	20002351	674
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000173754	protein_coding		7	-1	134376825	676
ENSMUSG00000043895	protein_coding	S1pr2	ENSMUST00000214218	protein_coding		9	-1	20976709	379
ENSMUSG00000025875	protein_coding	Tspan17	ENSMUST00000163796	protein_coding		13	1	54789463	712
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000174271	processed_transcript		7	-1	134385661	458
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000231712	protein_coding	principal1	16	-1	17111242	3088
ENSMUSG00000043895	protein_coding	S1pr2	ENSMUST00000214333	retained_intron		9	-1	20976704	1587
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000205682	processed_transcript		7	-1	134498984	507
ENSMUSG00000096977	lincRNA	Gm10827	ENSMUST00000181897	lincRNA		10	1	18235053	2586
ENSMUSG00000082936	processed_pseudogene	Gm16166	ENSMUST00000118291	processed_pseudogene		10	1	120928186	787
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000232303	retained_intron		16	-1	17089459	708
ENSMUSG00000116780	protein_coding	Gm3417	ENSMUST00000097399	protein_coding	principal1	17	-1	14978790	712
ENSMUSG00000096977	lincRNA	Gm10827	ENSMUST00000216248	lincRNA		10	1	18235366	380
ENSMUSG00000025875	protein_coding	Tspan17	ENSMUST00000163915	protein_coding		13	1	54789595	459
ENSMUSG00000030994	protein_coding	D7Ertd443e	ENSMUST00000205334	retained_intron		7	-1	134501160	1555
ENSMUSG00000027080	protein_coding	Med19	ENSMUST00000102645	protein_coding	principal1	2	1	84678402	2059
ENSMUSG00000030110	protein_coding	Ret	ENSMUST00000088790	protein_coding	alternative2	6	-1	118197718	4497
ENSMUSG00000031861	protein_coding	Lpar2	ENSMUST00000034325	protein_coding	principal1	8	1	69822429	5837
ENSMUSG00000025875	protein_coding	Tspan17	ENSMUST00000099503	protein_coding	alternative1	13	1	54789595	822
ENSMUSG00000114511	antisense	0710001A04Rik	ENSMUST00000224766	antisense		18	1	25713770	1345
ENSMUSG00000101259	unprocessed_pseudogene	Gm21242	ENSMUST00000190489	unprocessed_pseudogene		Y	-1	79665570	696
ENSMUSG00000116780	protein_coding	Gm3417	ENSMUST00000232173	protein_coding		17	-1	14978790	593
ENSMUSG00000110762	processed_pseudogene	Gm48229	ENSMUST00000215390	processed_pseudogene		10	-1	18303062	394
ENSMUSG00000025875	protein_coding	Tspan17	ENSMUST00000171859	protein_coding		13	1	54789645	433
ENSMUSG00000031861	protein_coding	Lpar2	ENSMUST00000238452	protein_coding		8	1	69822584	1350
ENSMUSG00000027080	protein_coding	Med19	ENSMUST00000141595	processed_transcript		2	1	84685633	778
ENSMUSG00000031861	protein_coding	Lpar2	ENSMUST00000164890	protein_coding	principal1	8	1	69822429	5800
ENSMUSG00000025875	protein_coding	Tspan17	ENSMUST00000130568	protein_coding		13	1	54792740	614
ENSMUSG00000100610	unprocessed_pseudogene	Gm29031	ENSMUST00000185316	unprocessed_pseudogene		Y	-1	79695328	614
ENSMUSG00000028468	protein_coding	Rgp1	ENSMUST00000107886	protein_coding	principal1	4	1	43578715	5888
ENSMUSG00000113734	lincRNA	Gm48539	ENSMUST00000220591	lincRNA		12	-1	15301045	923
ENSMUSG00000113069	processed_pseudogene	Gm48541	ENSMUST00000222638	processed_pseudogene		12	1	15483043	3628
ENSMUSG00000036198	protein_coding	Arhgap36	ENSMUST00000114904	protein_coding	principal2	X	1	49470450	3033
ENSMUSG00000025875	protein_coding	Tspan17	ENSMUST00000145574	protein_coding		13	1	54792871	718
ENSMUSG00000086598	protein_coding	Btbd18	ENSMUST00000144684	processed_transcript		2	1	84659079	636
ENSMUSG00000028468	protein_coding	Rgp1	ENSMUST00000117140	protein_coding		4	1	43578735	1635
ENSMUSG00000101197	unprocessed_pseudogene	Gm29032	ENSMUST00000189797	unprocessed_pseudogene		Y	-1	79732217	697
ENSMUSG00000036198	protein_coding	Arhgap36	ENSMUST00000042444	protein_coding	alternative2	X	1	49470577	2733
ENSMUSG00000022941	protein_coding	Ripply3	ENSMUST00000023660	protein_coding	principal1	16	1	94328420	1531
ENSMUSG00000025875	protein_coding	Tspan17	ENSMUST00000139574	retained_intron		13	1	54795384	425
ENSMUSG00000113339	processed_pseudogene	Gm17915	ENSMUST00000222077	processed_pseudogene		12	1	15581254	548
ENSMUSG00000036198	protein_coding	Arhgap36	ENSMUST00000130558	protein_coding		X	1	49463945	964
ENSMUSG00000031095	protein_coding	Cul4b	ENSMUST00000115118	protein_coding	principal2	X	-1	38576196	3344
ENSMUSG00000079710	protein_coding	Gm3448	ENSMUST00000179539	protein_coding	principal1	17	-1	15010182	752
ENSMUSG00000085183	lincRNA	Wincr1	ENSMUST00000146678	lincRNA		4	1	89050308	618
ENSMUSG00000036198	protein_coding	Arhgap36	ENSMUST00000151128	processed_transcript		X	1	49485675	321
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000232397	processed_transcript		16	-1	17097414	1319
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000231451	nonsense_mediated_decay		16	-1	17111242	1395
ENSMUSG00000079710	protein_coding	Gm3448	ENSMUST00000232299	protein_coding		17	-1	15010169	2253
ENSMUSG00000086598	protein_coding	Btbd18	ENSMUST00000133437	protein_coding	principal1	2	1	84659546	3052
ENSMUSG00000085183	lincRNA	Wincr1	ENSMUST00000129601	lincRNA		4	1	89058796	418
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000231898	retained_intron		16	-1	17091517	400
ENSMUSG00000036198	protein_coding	Arhgap36	ENSMUST00000132784	processed_transcript		X	1	49493899	419
ENSMUSG00000090779	antisense	Gm17110	ENSMUST00000171248	antisense		14	1	34501715	735
ENSMUSG00000031095	protein_coding	Cul4b	ENSMUST00000147129	nonsense_mediated_decay		X	-1	38564662	3103
ENSMUSG00000079710	protein_coding	Gm3448	ENSMUST00000097400	protein_coding	principal1	17	-1	15041537	747
ENSMUSG00000068299	protein_coding	Nat8f4	ENSMUST00000159755	protein_coding		6	-1	85902533	1129
ENSMUSG00000101963	transcribed_processed_pseudogene	1700001J11Rik	ENSMUST00000185917	processed_transcript		9	1	40050365	759
ENSMUSG00000101963	transcribed_processed_pseudogene	1700001J11Rik	ENSMUST00000190330	transcribed_processed_pseudogene		9	1	40050566	2463
ENSMUSG00000040797	protein_coding	Iqsec3	ENSMUST00000129815	nonsense_mediated_decay		6	-1	121473623	7464
ENSMUSG00000040797	protein_coding	Iqsec3	ENSMUST00000152103	nonsense_mediated_decay		6	-1	121473665	6556
ENSMUSG00000108736	lincRNA	Gm45151	ENSMUST00000205445	lincRNA		7	1	116543656	712
ENSMUSG00000031095	protein_coding	Cul4b	ENSMUST00000050083	protein_coding	principal2	X	-1	38576183	3090
ENSMUSG00000068299	protein_coding	Nat8f4	ENSMUST00000095757	protein_coding	principal1	6	-1	85904884	3019
ENSMUSG00000068699	protein_coding	Flnc	ENSMUST00000148404	retained_intron		6	1	29433256	1151
ENSMUSG00000108438	processed_pseudogene	Gm9278	ENSMUST00000205508	processed_pseudogene		7	1	43506951	553
ENSMUSG00000043782	protein_coding	Bicdl2	ENSMUST00000062967	protein_coding		17	1	23660506	1941
ENSMUSG00000028468	protein_coding	Rgp1	ENSMUST00000131178	processed_transcript		4	1	43578954	531
ENSMUSG00000030591	protein_coding	Psmd8	ENSMUST00000209034	protein_coding		7	-1	29180481	1983
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000232481	protein_coding		16	-1	17111196	786
ENSMUSG00000043782	protein_coding	Bicdl2	ENSMUST00000232760	protein_coding		17	1	23661349	1990
ENSMUSG00000028468	protein_coding	Rgp1	ENSMUST00000030190	protein_coding	principal1	4	1	43578958	1292
ENSMUSG00000108456	lincRNA	4732496C06Rik	ENSMUST00000206533	lincRNA		7	1	116546865	2500
ENSMUSG00000002578	protein_coding	Ikzf4	ENSMUST00000133342	protein_coding	principal2	10	-1	128645991	5150
ENSMUSG00000085540	antisense	Gm16036	ENSMUST00000150385	antisense		5	-1	141616002	1112
ENSMUSG00000028468	protein_coding	Rgp1	ENSMUST00000135895	retained_intron		4	1	43578983	269
ENSMUSG00000108740	processed_pseudogene	Gm6008	ENSMUST00000206542	processed_pseudogene		7	-1	116804499	874
ENSMUSG00000105212	TEC	Gm43557	ENSMUST00000197100	TEC		5	-1	141318134	2370
ENSMUSG00000002578	protein_coding	Ikzf4	ENSMUST00000238610	protein_coding	alternative1	10	-1	128669358	5173
ENSMUSG00000043782	protein_coding	Bicdl2	ENSMUST00000233541	protein_coding	principal1	17	1	23665018	1575
ENSMUSG00000028468	protein_coding	Rgp1	ENSMUST00000141612	retained_intron		4	1	43579737	577
ENSMUSG00000002578	protein_coding	Ikzf4	ENSMUST00000238712	protein_coding	alternative1	10	-1	128669358	5251
ENSMUSG00000107383	processed_pseudogene	Gm4366	ENSMUST00000201488	processed_pseudogene		7	-1	116825851	1342
ENSMUSG00000028468	protein_coding	Rgp1	ENSMUST00000141782	retained_intron		4	1	43581214	336
ENSMUSG00000043782	protein_coding	Bicdl2	ENSMUST00000233930	retained_intron		17	1	23666126	854
ENSMUSG00000026646	protein_coding	Suv39h2	ENSMUST00000027956	protein_coding	principal1	2	-1	3475031	4327
ENSMUSG00000037366	protein_coding	Pafah2	ENSMUST00000105869	protein_coding	principal1	4	1	134396320	2248
ENSMUSG00000002578	protein_coding	Ikzf4	ENSMUST00000221150	protein_coding		10	-1	128645826	2213
ENSMUSG00000083382	processed_pseudogene	Gm6433	ENSMUST00000118634	processed_pseudogene		5	-1	141268455	875
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000232169	retained_intron		16	-1	17103627	763
ENSMUSG00000041319	protein_coding	Thoc6	ENSMUST00000125443	retained_intron		17	-1	23669643	857
ENSMUSG00000105387	lincRNA	Gm29681	ENSMUST00000198696	lincRNA		5	-1	131414718	4233
ENSMUSG00000026646	protein_coding	Suv39h2	ENSMUST00000060618	protein_coding		2	-1	3474960	1831
ENSMUSG00000010803	protein_coding	Gabra1	ENSMUST00000205546	protein_coding	principal1	11	-1	42182163	4045
ENSMUSG00000108303	lincRNA	Gm39075	ENSMUST00000206031	lincRNA		7	1	117229607	512
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000231287	retained_intron		16	-1	17097144	538
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000231245	protein_coding		16	-1	17111215	838
ENSMUSG00000026646	protein_coding	Suv39h2	ENSMUST00000127540	nonsense_mediated_decay		2	-1	3474969	2331
ENSMUSG00000066030	protein_coding	Oog2	ENSMUST00000141847	processed_transcript		4	1	144190719	690
ENSMUSG00000026646	protein_coding	Suv39h2	ENSMUST00000100458	protein_coding		2	-1	3474419	2169
ENSMUSG00000010803	protein_coding	Gabra1	ENSMUST00000020707	protein_coding	principal1	11	-1	42182930	4688
ENSMUSG00000002578	protein_coding	Ikzf4	ENSMUST00000223162	nonsense_mediated_decay		10	-1	128645844	3449
ENSMUSG00000071369	protein_coding	Map3k5	ENSMUST00000095806	protein_coding	principal2	10	1	19934472	5450
ENSMUSG00000002578	protein_coding	Ikzf4	ENSMUST00000222067	protein_coding		10	-1	128644648	2688
ENSMUSG00000071369	protein_coding	Map3k5	ENSMUST00000120259	protein_coding	alternative2	10	1	19934526	4289
ENSMUSG00000043972	protein_coding	Opn5	ENSMUST00000068355	protein_coding	principal1	17	-1	42611395	1906
ENSMUSG00000002578	protein_coding	Ikzf4	ENSMUST00000222901	nonsense_mediated_decay		10	-1	128645796	490
ENSMUSG00000010803	protein_coding	Gabra1	ENSMUST00000206105	protein_coding		11	-1	42179843	1116
ENSMUSG00000010803	protein_coding	Gabra1	ENSMUST00000207274	protein_coding		11	-1	42182104	570
ENSMUSG00000010803	protein_coding	Gabra1	ENSMUST00000153147	protein_coding		11	-1	42179956	486
ENSMUSG00000071369	protein_coding	Map3k5	ENSMUST00000129437	protein_coding		10	1	19935223	789
ENSMUSG00000037366	protein_coding	Pafah2	ENSMUST00000140888	processed_transcript		4	1	134396370	694
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000231635	processed_transcript		16	-1	17111236	490
ENSMUSG00000002578	protein_coding	Ikzf4	ENSMUST00000223145	processed_transcript		10	-1	128645790	358
ENSMUSG00000071369	protein_coding	Map3k5	ENSMUST00000152533	protein_coding		10	1	19951055	378
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000115419	protein_coding		6	1	17693994	2194
ENSMUSG00000106965	processed_pseudogene	Gm18290	ENSMUST00000202900	processed_pseudogene		6	-1	85921418	844
ENSMUSG00000002578	protein_coding	Ikzf4	ENSMUST00000222899	processed_transcript		10	-1	128645807	363
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000231587	retained_intron		16	-1	17111213	723
ENSMUSG00000071369	protein_coding	Map3k5	ENSMUST00000138994	non_stop_decay		10	1	20099525	513
ENSMUSG00000037366	protein_coding	Pafah2	ENSMUST00000131337	processed_transcript		4	1	134396407	381
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000152156	retained_intron		5	1	115506711	3761
ENSMUSG00000010803	protein_coding	Gabra1	ENSMUST00000132971	protein_coding		11	-1	42182930	398
ENSMUSG00000002578	protein_coding	Ikzf4	ENSMUST00000221022	processed_transcript		10	-1	128645826	350
ENSMUSG00000037366	protein_coding	Pafah2	ENSMUST00000148863	processed_transcript		4	1	134397323	401
ENSMUSG00000071369	protein_coding	Map3k5	ENSMUST00000156369	retained_intron		10	1	20124801	370
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000232510	processed_transcript		16	-1	17111236	432
ENSMUSG00000010803	protein_coding	Gabra1	ENSMUST00000169305	processed_transcript		11	-1	42182460	2503
ENSMUSG00000096439	unprocessed_pseudogene	Obox4-ps23	ENSMUST00000175738	unprocessed_pseudogene		7	1	15263943	1137
ENSMUSG00000103166	TEC	Gm10537	ENSMUST00000192625	TEC		1	1	133829528	1698
ENSMUSG00000057103	protein_coding	Nat8f1	ENSMUST00000161198	protein_coding	alternative2	6	-1	85915687	1021
ENSMUSG00000010803	protein_coding	Gabra1	ENSMUST00000206085	protein_coding		11	-1	42182910	423
ENSMUSG00000083202	processed_pseudogene	Gm12388	ENSMUST00000119112	processed_pseudogene		4	1	40069101	1887
ENSMUSG00000098404	unprocessed_pseudogene	Mrip-ps	ENSMUST00000184613	unprocessed_pseudogene		7	-1	15289190	940
ENSMUSG00000100830	lincRNA	Gm28441	ENSMUST00000190927	lincRNA		1	1	133835189	1343
ENSMUSG00000066030	protein_coding	Oog2	ENSMUST00000080405	protein_coding	principal1	4	1	144190729	1917
ENSMUSG00000057103	protein_coding	Nat8f1	ENSMUST00000172982	processed_transcript		6	-1	85915666	274
ENSMUSG00000022771	protein_coding	Ppil2	ENSMUST00000231536	retained_intron		16	-1	17111232	935
ENSMUSG00000057103	protein_coding	Nat8f1	ENSMUST00000174369	protein_coding		6	-1	85915604	786
ENSMUSG00000087406	processed_transcript	E130215H24Rik	ENSMUST00000145525	processed_transcript		2	1	150667494	939
ENSMUSG00000057103	protein_coding	Nat8f1	ENSMUST00000239124	protein_coding	principal2	6	-1	85915677	1008
ENSMUSG00000066030	protein_coding	Oog2	ENSMUST00000143978	protein_coding		4	1	144190730	669
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000086523	protein_coding	alternative2	5	1	115506808	2667
ENSMUSG00000066030	protein_coding	Oog2	ENSMUST00000129781	processed_transcript		4	1	144190733	453
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000212819	protein_coding	alternative2	5	1	115506856	3189
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000129897	processed_transcript		5	1	115516355	361
ENSMUSG00000108693	TEC	Gm45153	ENSMUST00000205957	TEC		7	1	117381862	1901
ENSMUSG00000029388	protein_coding	Eif2b1	ENSMUST00000031334	protein_coding	principal1	5	-1	124579131	2013
ENSMUSG00000040797	protein_coding	Iqsec3	ENSMUST00000046373	protein_coding	principal1	6	-1	121473678	6840
ENSMUSG00000030591	protein_coding	Psmd8	ENSMUST00000182328	protein_coding	alternative2	7	-1	29180552	1391
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000125007	processed_transcript		5	1	115520305	3736
ENSMUSG00000040797	protein_coding	Iqsec3	ENSMUST00000151397	protein_coding		6	-1	121473678	8067
ENSMUSG00000037366	protein_coding	Pafah2	ENSMUST00000105870	protein_coding		4	1	134397471	3180
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000202142	processed_transcript		6	1	85911865	335
ENSMUSG00000029388	protein_coding	Eif2b1	ENSMUST00000152716	retained_intron		5	-1	124574916	600
ENSMUSG00000020080	protein_coding	Hkdc1	ENSMUST00000020277	protein_coding	principal1	10	-1	62422491	3517
ENSMUSG00000024032	protein_coding	Tff1	ENSMUST00000024831	protein_coding	principal1	17	-1	31165277	703
ENSMUSG00000030657	protein_coding	Xylt1	ENSMUST00000160035	retained_intron		7	1	117380979	2138
ENSMUSG00000113605	TEC	4930425K24Rik	ENSMUST00000222054	TEC		12	1	110236492	2143
ENSMUSG00000037366	protein_coding	Pafah2	ENSMUST00000132658	protein_coding		4	1	134402912	414
ENSMUSG00000003435	protein_coding	Supt5	ENSMUST00000003527	protein_coding	principal1	7	-1	28338719	3513
ENSMUSG00000030591	protein_coding	Psmd8	ENSMUST00000059642	protein_coding	principal2	7	-1	29180701	1540
ENSMUSG00000029388	protein_coding	Eif2b1	ENSMUST00000198318	nonsense_mediated_decay		5	-1	124579061	535
ENSMUSG00000024032	protein_coding	Tff1	ENSMUST00000235870	protein_coding		17	-1	31165002	272
ENSMUSG00000020080	protein_coding	Hkdc1	ENSMUST00000159493	retained_intron		10	-1	62400361	765
ENSMUSG00000048661	protein_coding	Lemd3	ENSMUST00000119944	protein_coding	principal2	10	-1	120979332	4743
ENSMUSG00000037366	protein_coding	Pafah2	ENSMUST00000145626	processed_transcript		4	1	134402970	875
ENSMUSG00000003435	protein_coding	Supt5	ENSMUST00000209141	protein_coding	principal1	7	-1	28338706	3755
ENSMUSG00000020080	protein_coding	Hkdc1	ENSMUST00000159454	retained_intron		10	-1	62411804	395
ENSMUSG00000029388	protein_coding	Eif2b1	ENSMUST00000135361	protein_coding		5	-1	124579075	619
ENSMUSG00000003435	protein_coding	Supt5	ENSMUST00000209105	processed_transcript		7	-1	28318792	396
ENSMUSG00000029388	protein_coding	Eif2b1	ENSMUST00000128920	protein_coding		5	-1	124578992	624
ENSMUSG00000048661	protein_coding	Lemd3	ENSMUST00000119093	protein_coding	alternative2	10	-1	120979332	4370
ENSMUSG00000003435	protein_coding	Supt5	ENSMUST00000208243	nonsense_mediated_decay		7	-1	28329423	611
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000137716	protein_coding		5	1	115542914	898
ENSMUSG00000041857	protein_coding	Oosp1	ENSMUST00000048214	protein_coding	principal2	19	-1	11691150	972
ENSMUSG00000030591	protein_coding	Psmd8	ENSMUST00000208592	retained_intron		7	-1	29175859	668
ENSMUSG00000020080	protein_coding	Hkdc1	ENSMUST00000159579	retained_intron		10	-1	62422408	1666
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000114115	protein_coding	alternative2	2	-1	26380649	4368
ENSMUSG00000075165	protein_coding	Olfr1105	ENSMUST00000215978	protein_coding	principal1	2	-1	87036531	3012
ENSMUSG00000029388	protein_coding	Eif2b1	ENSMUST00000135163	nonsense_mediated_decay		5	-1	124579032	349
ENSMUSG00000052848	lincRNA	C130026L21Rik	ENSMUST00000064930	lincRNA		5	1	111581422	2472
ENSMUSG00000030591	protein_coding	Psmd8	ENSMUST00000208461	retained_intron		7	-1	29176465	468
ENSMUSG00000003435	protein_coding	Supt5	ENSMUST00000208367	retained_intron		7	-1	28329086	2027
ENSMUSG00000064329	protein_coding	Scn1a	ENSMUST00000200839	nonsense_mediated_decay		2	-1	66317946	3562
ENSMUSG00000075165	protein_coding	Olfr1105	ENSMUST00000099868	protein_coding	principal1	2	-1	87034219	939
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000157050	protein_coding		5	1	115542950	843
ENSMUSG00000003435	protein_coding	Supt5	ENSMUST00000208726	retained_intron		7	-1	28331454	718
ENSMUSG00000030591	protein_coding	Psmd8	ENSMUST00000207087	retained_intron		7	-1	29179021	494
ENSMUSG00000085569	processed_transcript	Gm12602	ENSMUST00000154352	processed_transcript		4	-1	89128226	707
ENSMUSG00000052848	lincRNA	C130026L21Rik	ENSMUST00000199587	lincRNA		5	1	111581561	1838
ENSMUSG00000030591	protein_coding	Psmd8	ENSMUST00000186182	protein_coding	principal2	7	-1	29180673	1512
ENSMUSG00000100397	processed_pseudogene	Gm28071	ENSMUST00000190355	processed_pseudogene		1	1	79957580	478
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000153682	processed_transcript		5	1	115543947	438
ENSMUSG00000085569	processed_transcript	Gm12602	ENSMUST00000138655	processed_transcript		4	-1	89128181	430
ENSMUSG00000041857	protein_coding	Oosp1	ENSMUST00000186557	protein_coding	alternative2	19	-1	11691028	495
ENSMUSG00000052848	lincRNA	C130026L21Rik	ENSMUST00000196725	lincRNA		5	1	111581568	756
ENSMUSG00000099753	processed_pseudogene	Gm28058	ENSMUST00000186421	processed_pseudogene		1	1	80098622	264
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000202564	protein_coding	alternative1	5	1	115544085	2126
ENSMUSG00000041857	protein_coding	Oosp1	ENSMUST00000139158	nonsense_mediated_decay		19	-1	11691034	545
ENSMUSG00000052848	lincRNA	C130026L21Rik	ENSMUST00000198458	lincRNA		5	1	111582431	619
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000135171	processed_transcript		2	-1	26365024	814
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000134198	retained_intron		5	1	115544114	524
ENSMUSG00000104833	lincRNA	Gm42489	ENSMUST00000198964	lincRNA		5	1	111593616	669
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000125054	retained_intron		5	1	115544796	3484
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000139834	retained_intron		5	1	115545304	377
ENSMUSG00000029528	protein_coding	Pxn	ENSMUST00000138139	retained_intron		5	1	115551939	772
ENSMUSG00000021087	protein_coding	Rtn1	ENSMUST00000150156	processed_transcript		12	-1	72235739	1428
ENSMUSG00000054008	protein_coding	Ndst1	ENSMUST00000235795	protein_coding		18	-1	60727563	5262
ENSMUSG00000014633	protein_coding	Cmc2	ENSMUST00000155260	retained_intron		8	-1	116894524	1612
ENSMUSG00000100763	antisense	Gm28777	ENSMUST00000191402	antisense		1	1	53196113	535
ENSMUSG00000021796	protein_coding	Bmpr1a	ENSMUST00000049005	protein_coding	principal1	14	-1	34502687	5956
ENSMUSG00000021796	protein_coding	Bmpr1a	ENSMUST00000165280	protein_coding		14	-1	34460556	1945
ENSMUSG00000021796	protein_coding	Bmpr1a	ENSMUST00000171343	protein_coding		14	-1	34503341	748
ENSMUSG00000030657	protein_coding	Xylt1	ENSMUST00000032892	protein_coding	principal1	7	1	117380979	9020
ENSMUSG00000021796	protein_coding	Bmpr1a	ENSMUST00000171551	protein_coding		14	-1	34502528	641
ENSMUSG00000086010	antisense	Gm15318	ENSMUST00000148215	antisense		17	1	31152752	932
ENSMUSG00000030657	protein_coding	Xylt1	ENSMUST00000161889	retained_intron		7	1	117475492	815
ENSMUSG00000020532	protein_coding	Acaca	ENSMUST00000133811	protein_coding		11	1	84129672	889
ENSMUSG00000032657	protein_coding	Fam189b	ENSMUST00000140473	protein_coding		3	1	89183143	469
ENSMUSG00000020532	protein_coding	Acaca	ENSMUST00000184534	processed_transcript		11	1	84129700	3412
ENSMUSG00000014633	protein_coding	Cmc2	ENSMUST00000148235	protein_coding	principal1	8	-1	116921455	1459
ENSMUSG00000086010	antisense	Gm15318	ENSMUST00000146320	antisense		17	1	31152752	1691
ENSMUSG00000086010	antisense	Gm15318	ENSMUST00000236974	antisense		17	1	31152794	1515
ENSMUSG00000086010	antisense	Gm15318	ENSMUST00000139773	antisense		17	1	31152796	717
ENSMUSG00000014633	protein_coding	Cmc2	ENSMUST00000131616	nonsense_mediated_decay		8	-1	116921422	876
ENSMUSG00000086010	antisense	Gm15318	ENSMUST00000237687	antisense		17	1	31159049	359
ENSMUSG00000086010	antisense	Gm15318	ENSMUST00000236237	antisense		17	1	31159413	371
ENSMUSG00000038762	protein_coding	Abcf1	ENSMUST00000043757	protein_coding	principal1	17	-1	35969761	3161
ENSMUSG00000014633	protein_coding	Cmc2	ENSMUST00000150128	nonsense_mediated_decay		8	-1	116921447	793
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000020991	protein_coding	principal1	12	1	3807030	9685
ENSMUSG00000014633	protein_coding	Cmc2	ENSMUST00000078589	protein_coding		8	-1	116921439	523
ENSMUSG00000038762	protein_coding	Abcf1	ENSMUST00000173111	retained_intron		17	-1	35958486	855
ENSMUSG00000014633	protein_coding	Cmc2	ENSMUST00000134356	processed_transcript		8	-1	116921446	413
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000100467	protein_coding	principal2	5	1	144768794	12479
ENSMUSG00000014633	protein_coding	Cmc2	ENSMUST00000128304	protein_coding		8	-1	116921365	394
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000172509	protein_coding		12	1	3807058	1115
ENSMUSG00000038762	protein_coding	Abcf1	ENSMUST00000173125	retained_intron		17	-1	35958188	798
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000038980	protein_coding	alternative2	5	1	144771089	12344
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000174817	protein_coding	principal1	12	1	3807160	8737
ENSMUSG00000001924	protein_coding	Uba1	ENSMUST00000089217	protein_coding	principal1	X	1	20658326	4044
ENSMUSG00000038762	protein_coding	Abcf1	ENSMUST00000173090	retained_intron		17	-1	35959466	464
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000176438	protein_coding	principal2	2	-1	45117395	9124
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000176732	protein_coding		2	-1	45112985	1762
ENSMUSG00000038762	protein_coding	Abcf1	ENSMUST00000087205	retained_intron		17	-1	35959614	724
ENSMUSG00000054008	protein_coding	Ndst1	ENSMUST00000237783	protein_coding	principal1	18	-1	60748650	6478
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000094120	protein_coding	alternative2	5	1	144771089	12456
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000213013	protein_coding	alternative2	5	1	144771150	12398
ENSMUSG00000054008	protein_coding	Ndst1	ENSMUST00000237572	protein_coding		18	-1	60697072	301
ENSMUSG00000038762	protein_coding	Abcf1	ENSMUST00000174834	retained_intron		17	-1	35964272	787
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000132925	protein_coding		5	1	144785525	11581
ENSMUSG00000054008	protein_coding	Ndst1	ENSMUST00000237885	protein_coding		18	-1	60733150	828
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000196258	retained_intron		5	1	144791459	2193
ENSMUSG00000054008	protein_coding	Ndst1	ENSMUST00000237070	protein_coding		18	-1	60748416	697
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000149850	processed_transcript		2	-1	26380632	4459
ENSMUSG00000038762	protein_coding	Abcf1	ENSMUST00000174128	protein_coding		17	-1	35969359	376
ENSMUSG00000038762	protein_coding	Abcf1	ENSMUST00000172661	nonsense_mediated_decay		17	-1	35969761	516
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000136054	processed_transcript		2	-1	26367770	724
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000174483	nonsense_mediated_decay		12	1	3849635	2613
ENSMUSG00000028066	protein_coding	Pmf1	ENSMUST00000193338	protein_coding		3	-1	88410326	795
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000123934	protein_coding		2	-1	26373631	761
ENSMUSG00000111439	lincRNA	Gm47633	ENSMUST00000213982	lincRNA		9	-1	37264659	567
ENSMUSG00000054008	protein_coding	Ndst1	ENSMUST00000169273	protein_coding	principal1	18	-1	60713389	6070
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000149316	processed_transcript		2	-1	26373611	797
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000028229	protein_coding		2	-1	45110515	5335
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000125789	processed_transcript		2	-1	26371142	543
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000148024	processed_transcript		2	-1	26374128	709
ENSMUSG00000086504	antisense	Kif16bos	ENSMUST00000124774	antisense		2	1	142902965	495
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000172816	protein_coding		12	1	3861021	467
ENSMUSG00000026239	protein_coding	Pde6d	ENSMUST00000027444	protein_coding	principal1	1	-1	86582547	1159
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000125673	nonsense_mediated_decay		6	1	17694032	991
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000068415	protein_coding	principal2	2	-1	45113279	5624
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000052113	protein_coding	alternative1	6	1	17694032	2046
ENSMUSG00000020219	protein_coding	Timm13	ENSMUST00000020440	protein_coding	principal1	10	-1	80900969	1225
ENSMUSG00000001924	protein_coding	Uba1	ENSMUST00000152235	processed_transcript		X	1	20658421	783
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000173197	protein_coding		12	1	3866191	654
ENSMUSG00000111681	TEC	Gm47640	ENSMUST00000216704	TEC		9	1	37269287	2882
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000081635	protein_coding	principal4	6	1	17694032	2115
ENSMUSG00000001924	protein_coding	Uba1	ENSMUST00000130694	processed_transcript		X	1	20659427	575
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000174102	protein_coding		12	1	3885449	555
ENSMUSG00000026239	protein_coding	Pde6d	ENSMUST00000148683	retained_intron		1	-1	86582547	1169
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000200844	protein_coding		2	-1	45113002	4064
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000133778	processed_transcript		2	-1	26373355	319
ENSMUSG00000020219	protein_coding	Timm13	ENSMUST00000219896	protein_coding		10	-1	80900785	542
ENSMUSG00000020219	protein_coding	Timm13	ENSMUST00000218481	protein_coding		10	-1	80900784	471
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000161765	retained_intron		10	-1	79746573	4288
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000132347	retained_intron		5	1	144804729	4781
ENSMUSG00000001924	protein_coding	Uba1	ENSMUST00000001989	protein_coding	principal1	X	1	20662898	4071
ENSMUSG00000020219	protein_coding	Timm13	ENSMUST00000218149	retained_intron		10	-1	80900782	435
ENSMUSG00000028066	protein_coding	Pmf1	ENSMUST00000056370	protein_coding	principal1	3	-1	88410331	1007
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000177302	protein_coding	principal2	2	-1	45110288	4020
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000197834	retained_intron		5	1	144812031	1752
ENSMUSG00000026239	protein_coding	Pde6d	ENSMUST00000143674	nonsense_mediated_decay		1	-1	86582629	1306
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000143357	retained_intron		5	1	144819798	796
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000150121	processed_transcript		2	-1	26380635	2039
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000124909	retained_intron		5	1	144838985	719
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000144871	processed_transcript		2	-1	26374738	793
ENSMUSG00000026239	protein_coding	Pde6d	ENSMUST00000150653	processed_transcript		1	-1	86582517	469
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000135638	retained_intron		10	-1	60657333	10435
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000198524	retained_intron		5	1	144855583	3101
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000076836	protein_coding	alternative1	2	-1	45112890	3913
ENSMUSG00000026239	protein_coding	Pde6d	ENSMUST00000146220	protein_coding		1	-1	86582547	879
ENSMUSG00000033949	protein_coding	Trim36	ENSMUST00000037011	protein_coding	principal3	18	-1	46212607	4546
ENSMUSG00000001924	protein_coding	Uba1	ENSMUST00000137892	processed_transcript		X	1	20678077	830
ENSMUSG00000045482	protein_coding	Trrap	ENSMUST00000138589	processed_transcript		5	1	144857276	888
ENSMUSG00000028066	protein_coding	Pmf1	ENSMUST00000192365	processed_transcript		3	-1	88410265	802
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000124843	processed_transcript		2	-1	26380653	678
ENSMUSG00000102927	TEC	Gm37152	ENSMUST00000193369	TEC		1	1	86580058	1175
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000201804	protein_coding		2	-1	45110452	2236
ENSMUSG00000028066	protein_coding	Pmf1	ENSMUST00000195899	retained_intron		3	-1	88396720	978
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000155643	processed_transcript		2	-1	26380626	372
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000201623	protein_coding		2	-1	45111174	868
ENSMUSG00000001924	protein_coding	Uba1	ENSMUST00000136915	processed_transcript		X	1	20680595	761
ENSMUSG00000046152	protein_coding	Fut10	ENSMUST00000066173	protein_coding	principal3	8	1	31187331	3183
ENSMUSG00000028066	protein_coding	Pmf1	ENSMUST00000192909	nonsense_mediated_decay		3	-1	88410286	440
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000202432	protein_coding		2	-1	45022915	240
ENSMUSG00000028066	protein_coding	Pmf1	ENSMUST00000198774	retained_intron		3	-1	88399710	2346
ENSMUSG00000028066	protein_coding	Pmf1	ENSMUST00000191622	retained_intron		3	-1	88410308	437
ENSMUSG00000033949	protein_coding	Trim36	ENSMUST00000167364	protein_coding	alternative1	18	-1	46198818	2553
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000201211	protein_coding		2	-1	45110244	709
ENSMUSG00000036281	protein_coding	Snapc4	ENSMUST00000035427	protein_coding	principal2	2	-1	26380653	4363
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000128249	retained_intron		10	-1	60657333	10295
ENSMUSG00000033949	protein_coding	Trim36	ENSMUST00000237526	nonsense_mediated_decay		18	-1	46175614	1191
ENSMUSG00000103488	TEC	Gm37997	ENSMUST00000193515	TEC		19	1	14658667	267
ENSMUSG00000046152	protein_coding	Fut10	ENSMUST00000161788	protein_coding	alternative2	8	1	31187332	2962
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000153677	processed_transcript		10	-1	60653033	3041
ENSMUSG00000103616	TEC	1700018A14Rik	ENSMUST00000195587	TEC		18	1	46199021	711
ENSMUSG00000024608	protein_coding	Rps14	ENSMUST00000236652	protein_coding		18	1	60747098	367
ENSMUSG00000041319	protein_coding	Thoc6	ENSMUST00000047436	protein_coding	principal1	17	-1	23673842	1504
ENSMUSG00000048875	protein_coding	Pudp	ENSMUST00000235550	nonsense_mediated_decay		18	-1	50601419	1413
ENSMUSG00000046152	protein_coding	Fut10	ENSMUST00000110527	protein_coding		8	1	31187343	2327
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000172689	protein_coding		12	1	3891728	2328
ENSMUSG00000048875	protein_coding	Pudp	ENSMUST00000056460	protein_coding	principal1	18	-1	50568724	1069
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000172879	protein_coding		12	1	3894824	732
ENSMUSG00000027452	protein_coding	Acss1	ENSMUST00000028944	protein_coding	principal1	2	-1	150668258	3618
ENSMUSG00000046152	protein_coding	Fut10	ENSMUST00000161502	protein_coding	principal3	8	1	31187347	3527
ENSMUSG00000046152	protein_coding	Fut10	ENSMUST00000162162	processed_transcript		8	1	31201269	771
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000174774	protein_coding		12	1	3894869	814
ENSMUSG00000032657	protein_coding	Fam189b	ENSMUST00000041913	protein_coding	principal1	3	1	89183203	3083
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000209076	processed_transcript		2	-1	45023670	584
ENSMUSG00000117995	lincRNA	Gm50348	ENSMUST00000237461	lincRNA		19	1	15803058	3683
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000150281	nonsense_mediated_decay		6	1	17694032	1303
ENSMUSG00000083588	processed_pseudogene	Gm8051	ENSMUST00000120464	processed_pseudogene		8	-1	31215351	466
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000172749	protein_coding		12	1	3895593	550
ENSMUSG00000020695	protein_coding	Mrc2	ENSMUST00000151135	retained_intron		11	1	105340832	543
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000201413	processed_transcript		2	-1	45054241	453
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000174272	retained_intron		12	1	3897420	369
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000153149	processed_transcript		10	-1	60696490	1052
ENSMUSG00000041319	protein_coding	Thoc6	ENSMUST00000133849	retained_intron		17	-1	23673842	1673
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000201969	protein_coding		2	-1	45111156	631
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000174733	nonsense_mediated_decay		12	1	3900281	502
ENSMUSG00000021811	protein_coding	Dnajc9	ENSMUST00000022345	protein_coding	principal1	14	-1	20388910	1631
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000144462	processed_transcript		10	-1	60406453	1510
ENSMUSG00000027452	protein_coding	Acss1	ENSMUST00000154328	processed_transcript		2	-1	150638115	547
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000172913	protein_coding		12	1	3906816	501
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000127312	retained_intron		10	-1	60387035	2574
ENSMUSG00000027452	protein_coding	Acss1	ENSMUST00000147135	processed_transcript		2	-1	150638113	392
ENSMUSG00000021811	protein_coding	Dnajc9	ENSMUST00000223889	retained_intron		14	-1	20388401	781
ENSMUSG00000041319	protein_coding	Thoc6	ENSMUST00000095579	protein_coding	principal1	17	-1	23673882	1450
ENSMUSG00000063439	protein_coding	B9d2	ENSMUST00000205658	protein_coding	principal1	7	1	25680780	995
ENSMUSG00000021811	protein_coding	Dnajc9	ENSMUST00000223950	retained_intron		14	-1	20388876	1164
ENSMUSG00000020661	protein_coding	Dnmt3a	ENSMUST00000111186	protein_coding		12	1	3891744	5424
ENSMUSG00000021811	protein_coding	Dnajc9	ENSMUST00000223844	retained_intron		14	-1	20388821	713
ENSMUSG00000027452	protein_coding	Acss1	ENSMUST00000141500	processed_transcript		2	-1	150668500	656
ENSMUSG00000032657	protein_coding	Fam189b	ENSMUST00000147696	nonsense_mediated_decay		3	1	89183204	2977
ENSMUSG00000021087	protein_coding	Rtn1	ENSMUST00000078505	protein_coding		12	-1	72409054	3629
ENSMUSG00000063439	protein_coding	B9d2	ENSMUST00000205325	protein_coding		7	1	25680838	593
ENSMUSG00000041319	protein_coding	Thoc6	ENSMUST00000115490	protein_coding	principal1	17	-1	23673871	1431
ENSMUSG00000027452	protein_coding	Acss1	ENSMUST00000141785	retained_intron		2	-1	150668214	658
ENSMUSG00000018398	protein_coding	Septin8	ENSMUST00000142800	protein_coding		11	1	53519257	500
ENSMUSG00000063439	protein_coding	B9d2	ENSMUST00000206913	protein_coding		7	1	25680856	322
ENSMUSG00000032002	protein_coding	Dcun1d5	ENSMUST00000215683	protein_coding	principal1	9	1	7184520	2421
ENSMUSG00000083220	processed_pseudogene	Gm12919	ENSMUST00000119855	processed_pseudogene		4	1	10853843	1594
ENSMUSG00000041319	protein_coding	Thoc6	ENSMUST00000115489	protein_coding		17	-1	23673605	1083
ENSMUSG00000102262	unprocessed_pseudogene	Gm38107	ENSMUST00000194873	unprocessed_pseudogene		Y	1	21964371	696
ENSMUSG00000063439	protein_coding	B9d2	ENSMUST00000108403	protein_coding	principal1	7	1	25681158	1021
ENSMUSG00000032002	protein_coding	Dcun1d5	ENSMUST00000034499	protein_coding		9	1	7184551	1122
ENSMUSG00000032002	protein_coding	Dcun1d5	ENSMUST00000215818	protein_coding		9	1	7203263	734
ENSMUSG00000041319	protein_coding	Thoc6	ENSMUST00000135259	retained_intron		17	-1	23670509	627
ENSMUSG00000032002	protein_coding	Dcun1d5	ENSMUST00000216770	retained_intron		9	1	7203485	413
ENSMUSG00000021087	protein_coding	Rtn1	ENSMUST00000137990	protein_coding		12	-1	72236724	1008
ENSMUSG00000049010	protein_coding	Olfr982	ENSMUST00000054051	protein_coding	principal1	9	1	40073829	5576
ENSMUSG00000032657	protein_coding	Fam189b	ENSMUST00000127982	nonsense_mediated_decay		3	1	89183580	2802
ENSMUSG00000111615	processed_pseudogene	Gm47741	ENSMUST00000215932	processed_pseudogene		9	-1	7238379	226
ENSMUSG00000021087	protein_coding	Rtn1	ENSMUST00000144181	processed_transcript		12	-1	72236686	465
ENSMUSG00000021087	protein_coding	Rtn1	ENSMUST00000221756	retained_intron		12	-1	72236548	1076
ENSMUSG00000032657	protein_coding	Fam189b	ENSMUST00000117278	protein_coding		3	1	89183633	2593
ENSMUSG00000103528	protein_coding	Gm31571	ENSMUST00000192521	protein_coding	principal1	Y	-1	22051353	922
ENSMUSG00000032657	protein_coding	Fam189b	ENSMUST00000119707	protein_coding		3	1	89183641	2415
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000144488	nonsense_mediated_decay		6	1	17694032	2374
ENSMUSG00000026098	protein_coding	Pms1	ENSMUST00000027267	protein_coding	principal1	1	-1	53297018	3054
ENSMUSG00000021087	protein_coding	Rtn1	ENSMUST00000021497	protein_coding	principal1	12	-1	72236724	1544
ENSMUSG00000083015	processed_pseudogene	Gm16518	ENSMUST00000117960	processed_pseudogene		11	-1	3698326	508
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000115418	protein_coding		6	1	17694167	1678
ENSMUSG00000032657	protein_coding	Fam189b	ENSMUST00000126115	retained_intron		3	1	89184229	713
ENSMUSG00000100918	processed_pseudogene	Gm19224	ENSMUST00000190477	processed_pseudogene		19	-1	11704101	793
ENSMUSG00000044205	protein_coding	Olfr983	ENSMUST00000213087	protein_coding	alternative1	9	-1	40093595	6196
ENSMUSG00000007038	protein_coding	Neu1	ENSMUST00000007253	protein_coding	principal1	17	1	34931253	2474
ENSMUSG00000032657	protein_coding	Fam189b	ENSMUST00000136209	retained_intron		3	1	89187376	631
ENSMUSG00000044205	protein_coding	Olfr983	ENSMUST00000050996	protein_coding	principal2	9	-1	40093558	1050
ENSMUSG00000032657	protein_coding	Fam189b	ENSMUST00000125501	retained_intron		3	1	89187934	465
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000153525	processed_transcript		10	-1	60321585	3682
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000131635	processed_transcript		2	-1	45111076	618
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000151194	processed_transcript		10	-1	60321585	3787
ENSMUSG00000032657	protein_coding	Fam189b	ENSMUST00000155033	processed_transcript		3	1	89187984	514
ENSMUSG00000083455	processed_pseudogene	Gm15037	ENSMUST00000120358	processed_pseudogene		X	1	49560626	259
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000202935	protein_coding		2	-1	45113268	443
ENSMUSG00000082192	processed_pseudogene	Gm14719	ENSMUST00000121891	processed_pseudogene		X	1	49660960	340
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000156501	retained_intron		10	-1	60305649	1064
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000202371	retained_intron		2	-1	45113089	2692
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000124712	processed_transcript		10	-1	60380192	650
ENSMUSG00000007038	protein_coding	Neu1	ENSMUST00000173269	retained_intron		17	1	34931314	3619
ENSMUSG00000026098	protein_coding	Pms1	ENSMUST00000135246	protein_coding		1	-1	53297017	2205
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000123309	processed_transcript		10	-1	60687257	438
ENSMUSG00000059406	protein_coding	Tmprss9	ENSMUST00000219817	protein_coding	principal1	10	1	80871848	3581
ENSMUSG00000007038	protein_coding	Neu1	ENSMUST00000174715	retained_intron		17	1	34931863	446
ENSMUSG00000071764	protein_coding	Olfr1320	ENSMUST00000214375	protein_coding	principal1	X	1	49672333	1831
ENSMUSG00000071764	protein_coding	Olfr1320	ENSMUST00000214273	protein_coding	principal1	X	1	49672346	1982
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000145529	retained_intron		2	-1	45113245	2924
ENSMUSG00000024608	protein_coding	Rps14	ENSMUST00000235966	protein_coding	principal1	18	1	60747149	755
ENSMUSG00000026098	protein_coding	Pms1	ENSMUST00000142922	processed_transcript		1	-1	53296967	3054
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000202187	protein_coding		2	-1	45110627	550
ENSMUSG00000071764	protein_coding	Olfr1320	ENSMUST00000096449	protein_coding	principal1	X	1	49683504	960
ENSMUSG00000023905	protein_coding	Tnfrsf12a	ENSMUST00000024698	protein_coding	principal1	17	-1	23677468	984
ENSMUSG00000024608	protein_coding	Rps14	ENSMUST00000235603	protein_coding	principal1	18	1	60747671	785
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000127520	protein_coding		2	-1	45113284	577
ENSMUSG00000026098	protein_coding	Pms1	ENSMUST00000128337	protein_coding		1	-1	53296975	647
ENSMUSG00000059406	protein_coding	Tmprss9	ENSMUST00000219742	retained_intron		10	1	80879705	1904
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000201490	protein_coding		2	-1	45110754	462
ENSMUSG00000026098	protein_coding	Pms1	ENSMUST00000133358	protein_coding		1	-1	53282408	600
ENSMUSG00000067971	protein_coding	Olfr1321	ENSMUST00000215373	protein_coding	principal1	X	-1	49735059	4482
ENSMUSG00000023905	protein_coding	Tnfrsf12a	ENSMUST00000233814	protein_coding		17	-1	23677427	804
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000000674	protein_coding		6	1	17743592	1818
ENSMUSG00000026098	protein_coding	Pms1	ENSMUST00000126590	protein_coding		1	-1	53297015	459
ENSMUSG00000067971	protein_coding	Olfr1321	ENSMUST00000215918	processed_transcript		X	-1	49735054	1338
ENSMUSG00000067971	protein_coding	Olfr1321	ENSMUST00000216611	processed_transcript		X	-1	49735059	1465
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000077080	protein_coding		6	1	17743592	1887
ENSMUSG00000024608	protein_coding	Rps14	ENSMUST00000025511	protein_coding	principal1	18	1	60774596	597
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000153561	protein_coding		2	-1	45110733	2070
ENSMUSG00000059406	protein_coding	Tmprss9	ENSMUST00000105333	protein_coding	principal1	10	1	80879720	3497
ENSMUSG00000067971	protein_coding	Olfr1321	ENSMUST00000088876	protein_coding	principal1	X	-1	49727999	1056
ENSMUSG00000023905	protein_coding	Tnfrsf12a	ENSMUST00000167059	protein_coding		17	-1	23677429	640
ENSMUSG00000026098	protein_coding	Pms1	ENSMUST00000126412	protein_coding		1	-1	53297015	475
ENSMUSG00000024608	protein_coding	Rps14	ENSMUST00000236441	retained_intron		18	1	60774665	987
ENSMUSG00000026098	protein_coding	Pms1	ENSMUST00000188890	retained_intron		1	-1	53297015	1723
ENSMUSG00000024608	protein_coding	Rps14	ENSMUST00000142980	retained_intron		18	1	60774666	662
ENSMUSG00000103887	TEC	Gm37008	ENSMUST00000195712	TEC		7	1	92637208	319
ENSMUSG00000023905	protein_coding	Tnfrsf12a	ENSMUST00000233040	retained_intron		17	-1	23676553	753
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000105464	protein_coding	principal2	10	-1	60696490	11090
ENSMUSG00000050628	protein_coding	Ubald2	ENSMUST00000057676	protein_coding	principal1	11	1	116434094	1482
ENSMUSG00000024608	protein_coding	Rps14	ENSMUST00000118551	protein_coding	principal1	18	1	60774681	602
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000138726	processed_transcript		6	1	17749170	1680
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000152232	processed_transcript		2	-1	45110487	2690
ENSMUSG00000024608	protein_coding	Rps14	ENSMUST00000127568	protein_coding		18	1	60775229	449
ENSMUSG00000023905	protein_coding	Tnfrsf12a	ENSMUST00000233428	protein_coding		17	-1	23677420	635
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000124942	processed_transcript		2	-1	45113216	2989
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000201982	processed_transcript		2	-1	45113248	2608
ENSMUSG00000055933	protein_coding	Oosp3	ENSMUST00000069760	protein_coding	principal1	19	1	11697055	807
ENSMUSG00000024608	protein_coding	Rps14	ENSMUST00000137400	protein_coding		18	1	60775716	444
ENSMUSG00000050628	protein_coding	Ubald2	ENSMUST00000144310	processed_transcript		11	1	116434509	343
ENSMUSG00000023905	protein_coding	Tnfrsf12a	ENSMUST00000233754	retained_intron		17	-1	23677427	815
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000201298	processed_transcript		2	-1	45110076	370
ENSMUSG00000024608	protein_coding	Rps14	ENSMUST00000122279	protein_coding	principal1	18	1	60776239	667
ENSMUSG00000111948	processed_pseudogene	Gm47055	ENSMUST00000218914	processed_pseudogene		10	1	110480637	441
ENSMUSG00000034621	protein_coding	Gpatch8	ENSMUST00000143842	protein_coding	principal1	11	-1	102556199	6871
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000202345	processed_transcript		2	-1	45110484	644
ENSMUSG00000075707	protein_coding	Dio3	ENSMUST00000173014	protein_coding	principal1	12	1	110279068	2030
ENSMUSG00000040812	protein_coding	Agbl2	ENSMUST00000051831	nonsense_mediated_decay		2	1	90782727	3778
ENSMUSG00000114331	lincRNA	Gm48056	ENSMUST00000225265	lincRNA		13	-1	38536680	239
ENSMUSG00000055933	protein_coding	Oosp3	ENSMUST00000119053	protein_coding		19	1	11697078	621
ENSMUSG00000114866	lincRNA	Gm40922	ENSMUST00000225387	lincRNA		13	1	38554865	587
ENSMUSG00000075707	protein_coding	Dio3	ENSMUST00000097228	protein_coding		12	1	110279260	1449
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000123037	retained_intron		2	-1	45113001	3852
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000126743	processed_transcript		2	-1	45113508	432
ENSMUSG00000026872	protein_coding	Zeb2	ENSMUST00000238346	processed_transcript		2	-1	45117395	457
ENSMUSG00000034621	protein_coding	Gpatch8	ENSMUST00000069673	processed_transcript		11	-1	102508447	5597
ENSMUSG00000024268	protein_coding	Celf4	ENSMUST00000025117	protein_coding	alternative1	18	-1	25753750	2899
ENSMUSG00000113581	bidirectional_promoter_lncRNA	Dio3os	ENSMUST00000220800	bidirectional_promoter_lncRNA		12	-1	110277749	473
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000053148	protein_coding		6	1	17749170	2288
ENSMUSG00000113581	bidirectional_promoter_lncRNA	Dio3os	ENSMUST00000220793	bidirectional_promoter_lncRNA		12	-1	110278068	380
ENSMUSG00000040812	protein_coding	Agbl2	ENSMUST00000136058	protein_coding		2	1	90782728	2226
ENSMUSG00000019194	protein_coding	Scn1b	ENSMUST00000211945	protein_coding	principal1	7	-1	31126844	1501
ENSMUSG00000102555	TEC	6430511E19Rik	ENSMUST00000192772	TEC		7	1	92639949	3835
ENSMUSG00000034621	protein_coding	Gpatch8	ENSMUST00000131573	processed_transcript		11	-1	102556199	390
ENSMUSG00000040812	protein_coding	Agbl2	ENSMUST00000037206	protein_coding	alternative2	2	1	90783238	2763
ENSMUSG00000113392	processed_pseudogene	Gm36262	ENSMUST00000223274	processed_pseudogene		12	-1	54679809	499
ENSMUSG00000098066	antisense	Gm26944	ENSMUST00000182265	antisense		7	1	92639739	633
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000105463	protein_coding	alternative2	10	-1	60696490	10991
ENSMUSG00000034621	protein_coding	Gpatch8	ENSMUST00000126804	processed_transcript		11	-1	102556199	387
ENSMUSG00000012819	protein_coding	Cdh23	ENSMUST00000105461	protein_coding	alternative2	10	-1	60696490	11096
ENSMUSG00000034621	protein_coding	Gpatch8	ENSMUST00000127018	processed_transcript		11	-1	102556176	432
ENSMUSG00000113581	bidirectional_promoter_lncRNA	Dio3os	ENSMUST00000222401	bidirectional_promoter_lncRNA		12	-1	110278172	1380
ENSMUSG00000113581	bidirectional_promoter_lncRNA	Dio3os	ENSMUST00000222534	bidirectional_promoter_lncRNA		12	-1	110277968	716
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000115417	protein_coding		6	1	17749216	2168
ENSMUSG00000034621	protein_coding	Gpatch8	ENSMUST00000125754	processed_transcript		11	-1	102556392	893
ENSMUSG00000082487	processed_pseudogene	Gm11628	ENSMUST00000117568	processed_pseudogene		11	-1	102492609	171
ENSMUSG00000090439	protein_coding	Gm17455	ENSMUST00000164428	protein_coding	principal1	10	1	60399726	858
ENSMUSG00000081677	processed_pseudogene	Mdk-ps1	ENSMUST00000119782	processed_pseudogene		11	1	102545702	321
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000132175	retained_intron		6	1	17749292	2505
ENSMUSG00000090439	protein_coding	Gm17455	ENSMUST00000218974	protein_coding		10	1	60399904	375
ENSMUSG00000040812	protein_coding	Agbl2	ENSMUST00000149037	processed_transcript		2	1	90783265	3838
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000154059	retained_intron		6	1	17749329	4094
ENSMUSG00000090439	protein_coding	Gm17455	ENSMUST00000218360	protein_coding		10	1	60400757	337
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000140358	retained_intron		6	1	17749392	3874
ENSMUSG00000029019	protein_coding	Nppb	ENSMUST00000103231	protein_coding	principal1	4	1	147985788	781
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000130084	processed_transcript		6	1	17840537	394
ENSMUSG00000019194	protein_coding	Scn1b	ENSMUST00000098548	protein_coding	principal1	7	-1	31127003	1573
ENSMUSG00000061894	protein_coding	Zscan20	ENSMUST00000084276	processed_transcript		4	-1	128589962	3962
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000154497	processed_transcript		6	1	17840556	727
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000161662	protein_coding		10	-1	79739374	1287
ENSMUSG00000055114	processed_transcript	Anxa13	ENSMUST00000238490	processed_transcript		15	-1	58389383	1595
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000144743	processed_transcript		6	1	17854984	380
ENSMUSG00000114241	lincRNA	Gm30108	ENSMUST00000224276	lincRNA		14	1	20794239	449
ENSMUSG00000029534	protein_coding	St7	ENSMUST00000127322	processed_transcript		6	1	17905583	919
ENSMUSG00000040812	protein_coding	Agbl2	ENSMUST00000111481	protein_coding	principal2	2	1	90783573	3448
ENSMUSG00000055114	processed_transcript	Anxa13	ENSMUST00000227274	processed_transcript		15	-1	58389244	1201
ENSMUSG00000055114	processed_transcript	Anxa13	ENSMUST00000068515	processed_transcript		15	-1	58364148	915
ENSMUSG00000052248	antisense	Zeb2os	ENSMUST00000127150	antisense		2	1	45110707	1736
ENSMUSG00000086409	processed_pseudogene	Gm13898	ENSMUST00000141865	processed_pseudogene		6	-1	17711207	610
ENSMUSG00000112398	lincRNA	9230102K24Rik	ENSMUST00000220061	lincRNA		10	1	110596266	654
ENSMUSG00000040812	protein_coding	Agbl2	ENSMUST00000149361	processed_transcript		2	1	90784060	622
ENSMUSG00000052248	antisense	Zeb2os	ENSMUST00000232324	antisense		2	1	45110921	629
ENSMUSG00000021396	protein_coding	Nxnl2	ENSMUST00000021828	protein_coding	principal1	13	1	51171022	1167
ENSMUSG00000027203	protein_coding	Dut	ENSMUST00000082122	protein_coding	alternative2	2	1	125247190	1020
ENSMUSG00000112398	lincRNA	9230102K24Rik	ENSMUST00000219459	lincRNA		10	1	110600650	1303
ENSMUSG00000040812	protein_coding	Agbl2	ENSMUST00000170320	protein_coding	principal2	2	1	90782727	4507
ENSMUSG00000099849	lincRNA	Gm29274	ENSMUST00000188814	lincRNA		Y	-1	42462795	1498
ENSMUSG00000112872	processed_pseudogene	Gm47058	ENSMUST00000218721	processed_pseudogene		10	-1	110634803	535
ENSMUSG00000019194	protein_coding	Scn1b	ENSMUST00000211923	retained_intron		7	-1	31125420	749
ENSMUSG00000052248	antisense	Zeb2os	ENSMUST00000130827	antisense		2	1	45112260	1223
ENSMUSG00000021396	protein_coding	Nxnl2	ENSMUST00000221339	retained_intron		13	1	51171059	2904
ENSMUSG00000099849	lincRNA	Gm29274	ENSMUST00000188644	lincRNA		Y	-1	42462342	437
ENSMUSG00000040812	protein_coding	Agbl2	ENSMUST00000037219	protein_coding	principal2	2	1	90782744	3462
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000159082	retained_intron		10	-1	79746573	3935
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000160595	processed_transcript		10	-1	79736783	374
ENSMUSG00000095078	processed_pseudogene	Gm5866	ENSMUST00000177881	processed_pseudogene		5	1	52582074	973
ENSMUSG00000091383	processed_pseudogene	Hist1h2al	ENSMUST00000091708	processed_pseudogene		13	-1	51203065	339
ENSMUSG00000100822	lincRNA	Gm29275	ENSMUST00000189475	lincRNA		Y	-1	42490878	1494
ENSMUSG00000064329	protein_coding	Scn1a	ENSMUST00000112366	protein_coding	alternative1	2	-1	66410064	8386
ENSMUSG00000052248	antisense	Zeb2os	ENSMUST00000231986	antisense		2	1	45112488	443
ENSMUSG00000113521	processed_pseudogene	Gm29787	ENSMUST00000222129	processed_pseudogene		13	-1	51206111	849
ENSMUSG00000100822	lincRNA	Gm29275	ENSMUST00000188940	lincRNA		Y	-1	42490427	431
ENSMUSG00000080977	processed_pseudogene	Gm13772	ENSMUST00000118431	processed_pseudogene		2	-1	90804576	317
ENSMUSG00000052248	antisense	Zeb2os	ENSMUST00000231441	antisense		2	1	45112733	473
ENSMUSG00000052248	antisense	Zeb2os	ENSMUST00000183669	misc_RNA		2	1	45112488	61
ENSMUSG00000107028	processed_pseudogene	Gm5043	ENSMUST00000202103	processed_pseudogene		15	1	8914484	820
ENSMUSG00000052295	lincRNA	8030423F21Rik	ENSMUST00000064097	lincRNA		5	-1	52619012	2851
ENSMUSG00000027203	protein_coding	Dut	ENSMUST00000051605	protein_coding	principal3	2	1	125247482	1950
ENSMUSG00000107204	lincRNA	Gm43067	ENSMUST00000201580	lincRNA		6	-1	99896845	445
ENSMUSG00000076586	IG_V_gene	Igkv8-21	ENSMUST00000103387	IG_V_gene	principal1	6	-1	70315472	382
ENSMUSG00000027203	protein_coding	Dut	ENSMUST00000133211	processed_transcript		2	1	125247900	248
ENSMUSG00000107528	lincRNA	Gm44442	ENSMUST00000204298	lincRNA		6	-1	99950931	422
ENSMUSG00000064329	protein_coding	Scn1a	ENSMUST00000077489	protein_coding	principal3	2	-1	66351195	8116
ENSMUSG00000113426	processed_pseudogene	Gm6056	ENSMUST00000221253	processed_pseudogene		13	1	51338921	488
ENSMUSG00000107528	lincRNA	Gm44442	ENSMUST00000204919	lincRNA		6	-1	99931549	400
ENSMUSG00000085797	antisense	A530010F05Rik	ENSMUST00000146845	antisense		2	1	125274564	1020
ENSMUSG00000113162	processed_pseudogene	Gm47554	ENSMUST00000222986	processed_pseudogene		13	1	51344996	603
ENSMUSG00000087682	lincRNA	Gm14003	ENSMUST00000130919	lincRNA		2	-1	125283978	313
ENSMUSG00000064329	protein_coding	Scn1a	ENSMUST00000094951	protein_coding	alternative1	2	-1	66351177	5946
ENSMUSG00000105114	processed_pseudogene	Amd-ps5	ENSMUST00000198406	processed_pseudogene		6	1	70327036	989
ENSMUSG00000064329	protein_coding	Scn1a	ENSMUST00000156865	protein_coding		2	-1	66318139	2659
ENSMUSG00000117619	TEC	Gm50079	ENSMUST00000234767	TEC		18	1	9818784	1679
ENSMUSG00000098235	processed_pseudogene	Gm7497	ENSMUST00000183064	processed_pseudogene		18	1	9748732	993
ENSMUSG00000076587	IG_V_gene	Igkv6-20	ENSMUST00000103388	IG_V_gene	principal1	6	-1	70336507	375
ENSMUSG00000117597	TEC	Gm50078	ENSMUST00000234755	TEC		18	1	9716439	2731
ENSMUSG00000064329	protein_coding	Scn1a	ENSMUST00000138910	protein_coding		2	-1	66440840	1690
ENSMUSG00000117390	TEC	Gm50080	ENSMUST00000234495	TEC		18	1	9711293	3242
ENSMUSG00000064329	protein_coding	Scn1a	ENSMUST00000129508	retained_intron		2	-1	66440814	2978
ENSMUSG00000064329	protein_coding	Scn1a	ENSMUST00000112371	protein_coding	alternative1	2	-1	66440837	8287
ENSMUSG00000052187	protein_coding	Hbb-y	ENSMUST00000033229	protein_coding	principal1	7	-1	103853216	633
ENSMUSG00000085745	antisense	Gm14372	ENSMUST00000125355	antisense		7	-1	144406933	2193
ENSMUSG00000085386	processed_transcript	Gm13630	ENSMUST00000127849	processed_transcript		2	1	66409494	3650
ENSMUSG00000109500	TEC	Gm44999	ENSMUST00000207456	TEC		7	-1	144111085	1493
ENSMUSG00000018666	protein_coding	Cbx1	ENSMUST00000018810	protein_coding		11	1	96789127	1824
ENSMUSG00000018666	protein_coding	Cbx1	ENSMUST00000134585	nonsense_mediated_decay		11	1	96789137	2377
ENSMUSG00000090643	protein_coding	Gm3453	ENSMUST00000170686	protein_coding	principal5	14	-1	5979137	1756
ENSMUSG00000090643	protein_coding	Gm3453	ENSMUST00000178308	protein_coding	alternative2	14	-1	5979132	618
ENSMUSG00000067586	protein_coding	S1pr3	ENSMUST00000087978	protein_coding	principal1	13	1	51408639	4463
ENSMUSG00000024268	protein_coding	Celf4	ENSMUST00000223704	protein_coding		18	-1	25753983	2492
ENSMUSG00000029291	protein_coding	Rufy3	ENSMUST00000196894	protein_coding		5	1	88565040	3703
ENSMUSG00000112959	lincRNA	Gm32834	ENSMUST00000222417	lincRNA		13	-1	51418686	655
ENSMUSG00000112959	lincRNA	Gm32834	ENSMUST00000220470	lincRNA		13	-1	51418645	562
ENSMUSG00000025774	protein_coding	Crisp4	ENSMUST00000026876	protein_coding	alternative2	1	-1	18145902	1252
ENSMUSG00000118389	processed_pseudogene	Gm50246	ENSMUST00000237946	processed_pseudogene		18	1	65501406	1043
ENSMUSG00000025774	protein_coding	Crisp4	ENSMUST00000115344	protein_coding	principal4	1	-1	18145902	960
ENSMUSG00000018666	protein_coding	Cbx1	ENSMUST00000093943	protein_coding	principal1	11	1	96789159	1251
ENSMUSG00000061894	protein_coding	Zscan20	ENSMUST00000097877	protein_coding	principal1	4	-1	128610098	5364
ENSMUSG00000050578	protein_coding	Mmp13	ENSMUST00000015394	protein_coding	principal1	9	1	7272514	2673
ENSMUSG00000039683	protein_coding	Sdk1	ENSMUST00000085774	protein_coding	principal1	5	1	141241490	10352
ENSMUSG00000023918	protein_coding	Adgrf4	ENSMUST00000024711	protein_coding	principal1	17	-1	42692284	3060
ENSMUSG00000024268	protein_coding	Celf4	ENSMUST00000225477	protein_coding		18	-1	25754157	2626
ENSMUSG00000018666	protein_coding	Cbx1	ENSMUST00000141257	retained_intron		11	1	96789175	814
ENSMUSG00000096594	IG_V_gene	Igkv8-19	ENSMUST00000196599	IG_V_gene		6	-1	70341453	370
ENSMUSG00000020785	protein_coding	Camkk1	ENSMUST00000155720	retained_intron		11	1	73019008	3717
ENSMUSG00000061894	protein_coding	Zscan20	ENSMUST00000135309	nonsense_mediated_decay		4	-1	128610042	3183
ENSMUSG00000018666	protein_coding	Cbx1	ENSMUST00000079702	protein_coding		11	1	96789249	912
ENSMUSG00000023918	protein_coding	Adgrf4	ENSMUST00000167993	protein_coding	principal1	17	-1	42692284	2983
ENSMUSG00000039683	protein_coding	Sdk1	ENSMUST00000129831	retained_intron		5	1	141241918	387
ENSMUSG00000024268	protein_coding	Celf4	ENSMUST00000224553	protein_coding		18	-1	25753702	1729
ENSMUSG00000061894	protein_coding	Zscan20	ENSMUST00000151226	retained_intron		4	-1	128610034	3323
ENSMUSG00000025774	protein_coding	Crisp4	ENSMUST00000130669	retained_intron		1	-1	18145896	2614
ENSMUSG00000061894	protein_coding	Zscan20	ENSMUST00000147876	protein_coding		4	-1	128609995	368
ENSMUSG00000023918	protein_coding	Adgrf4	ENSMUST00000170723	protein_coding	principal1	17	-1	42692262	2751
ENSMUSG00000081249	processed_pseudogene	Gm11517	ENSMUST00000119491	processed_pseudogene		11	-1	96795825	387
ENSMUSG00000024268	protein_coding	Celf4	ENSMUST00000225528	nonsense_mediated_decay		18	-1	25486897	413
ENSMUSG00000029291	protein_coding	Rufy3	ENSMUST00000198965	protein_coding	principal1	5	1	88565040	3536
ENSMUSG00000025774	protein_coding	Crisp4	ENSMUST00000115340	protein_coding	alternative2	1	-1	18137051	1179
ENSMUSG00000096594	IG_V_gene	Igkv8-19	ENSMUST00000103389	IG_V_gene	principal1	6	-1	70341180	305
ENSMUSG00000061894	protein_coding	Zscan20	ENSMUST00000141040	protein_coding		4	-1	128609981	453
ENSMUSG00000024268	protein_coding	Celf4	ENSMUST00000224028	retained_intron		18	-1	25483117	1699
ENSMUSG00000023918	protein_coding	Adgrf4	ENSMUST00000164524	protein_coding		17	-1	42692273	390
ENSMUSG00000108151	lincRNA	Gm33201	ENSMUST00000204791	lincRNA		6	-1	99991215	855
ENSMUSG00000024268	protein_coding	Celf4	ENSMUST00000226091	processed_transcript		18	-1	25501239	324
ENSMUSG00000024268	protein_coding	Celf4	ENSMUST00000225927	processed_transcript		18	-1	25752692	518
ENSMUSG00000029291	protein_coding	Rufy3	ENSMUST00000199312	protein_coding		5	1	88583513	2182
ENSMUSG00000114343	processed_pseudogene	Gm48322	ENSMUST00000225113	processed_pseudogene		13	-1	66455354	707
ENSMUSG00000054302	protein_coding	Eapp	ENSMUST00000161592	protein_coding	principal1	12	-1	54695881	4186
ENSMUSG00000117860	lincRNA	Gm30018	ENSMUST00000236404	lincRNA		18	-1	65531801	543
ENSMUSG00000039683	protein_coding	Sdk1	ENSMUST00000145908	retained_intron		5	1	141373654	1676
ENSMUSG00000020532	protein_coding	Acaca	ENSMUST00000103201	protein_coding	principal1	11	1	84173122	9513
ENSMUSG00000020580	protein_coding	Rock2	ENSMUST00000020904	protein_coding	principal1	12	1	16894895	7644
ENSMUSG00000114406	processed_pseudogene	Gm48323	ENSMUST00000224488	processed_pseudogene		13	1	66490947	201
ENSMUSG00000024268	protein_coding	Celf4	ENSMUST00000224143	retained_intron		18	-1	25753953	3236
ENSMUSG00000118179	processed_pseudogene	Gm50247	ENSMUST00000237213	processed_pseudogene		18	1	65546108	474
ENSMUSG00000107558	TEC	2010109P13Rik	ENSMUST00000204605	TEC		6	-1	100143814	392
ENSMUSG00000039683	protein_coding	Sdk1	ENSMUST00000074546	protein_coding		5	1	141856787	7063
ENSMUSG00000036103	protein_coding	Colec12	ENSMUST00000234965	protein_coding	principal1	18	1	9707595	8024
ENSMUSG00000054302	protein_coding	Eapp	ENSMUST00000110713	protein_coding		12	-1	54695821	886
ENSMUSG00000105344	TEC	Gm43556	ENSMUST00000196186	TEC		5	-1	141308067	681
ENSMUSG00000020580	protein_coding	Rock2	ENSMUST00000220688	protein_coding		12	1	16895167	4357
ENSMUSG00000036103	protein_coding	Colec12	ENSMUST00000040069	nonsense_mediated_decay		18	1	9707601	3447
ENSMUSG00000024268	protein_coding	Celf4	ENSMUST00000115816	protein_coding	principal2	18	-1	25753983	3995
ENSMUSG00000029291	protein_coding	Rufy3	ENSMUST00000031229	protein_coding		5	1	88583536	4049
ENSMUSG00000045812	protein_coding	Olfr984	ENSMUST00000213858	protein_coding	principal1	9	-1	40104454	5186
ENSMUSG00000054302	protein_coding	Eapp	ENSMUST00000067272	protein_coding		12	-1	54695897	590
ENSMUSG00000084934	antisense	Gm16035	ENSMUST00000153879	antisense		5	-1	141380926	401
ENSMUSG00000036103	protein_coding	Colec12	ENSMUST00000234149	retained_intron		18	1	9707648	680
ENSMUSG00000045812	protein_coding	Olfr984	ENSMUST00000214856	protein_coding	principal1	9	-1	40110962	5025
ENSMUSG00000105873	TEC	Gm43708	ENSMUST00000198857	TEC		5	-1	141298103	961
ENSMUSG00000054302	protein_coding	Eapp	ENSMUST00000160085	protein_coding		12	-1	54695862	676
ENSMUSG00000114306	antisense	Gm3227	ENSMUST00000223994	antisense		18	1	25597490	2167
ENSMUSG00000036103	protein_coding	Colec12	ENSMUST00000234026	retained_intron		18	1	9874679	622
ENSMUSG00000020580	protein_coding	Rock2	ENSMUST00000220542	retained_intron		12	1	16927005	4380
ENSMUSG00000020532	protein_coding	Acaca	ENSMUST00000183548	retained_intron		11	1	84173354	5199
ENSMUSG00000045812	protein_coding	Olfr984	ENSMUST00000217536	protein_coding	principal1	9	-1	40114206	5114
ENSMUSG00000091285	processed_pseudogene	Gm17430	ENSMUST00000171339	processed_pseudogene		18	-1	9726670	466
ENSMUSG00000054302	protein_coding	Eapp	ENSMUST00000162106	protein_coding		12	-1	54695843	444
ENSMUSG00000029291	protein_coding	Rufy3	ENSMUST00000197664	retained_intron		5	1	88583577	2336
ENSMUSG00000020580	protein_coding	Rock2	ENSMUST00000221463	protein_coding		12	1	16973081	3002
ENSMUSG00000116809	TEC	A630036G19Rik	ENSMUST00000231240	TEC		16	-1	75034931	4080
ENSMUSG00000083150	processed_pseudogene	Gm11852	ENSMUST00000120806	processed_pseudogene		4	1	18193531	222
ENSMUSG00000113956	processed_pseudogene	Gm19368	ENSMUST00000221258	processed_pseudogene		12	-1	18239074	4424
ENSMUSG00000029291	protein_coding	Rufy3	ENSMUST00000199207	retained_intron		5	1	88583578	2722
ENSMUSG00000045812	protein_coding	Olfr984	ENSMUST00000056795	protein_coding	principal1	9	-1	40101488	945
ENSMUSG00000113202	processed_pseudogene	Gm48291	ENSMUST00000222207	processed_pseudogene		12	-1	16922305	319
ENSMUSG00000029291	protein_coding	Rufy3	ENSMUST00000196686	protein_coding		5	1	88583794	2077
ENSMUSG00000112994	processed_pseudogene	Gm46312	ENSMUST00000220961	processed_pseudogene		12	1	18285572	420
ENSMUSG00000020695	protein_coding	Mrc2	ENSMUST00000100335	protein_coding	principal1	11	1	105292646	5795
ENSMUSG00000093727	unprocessed_pseudogene	Obox3-ps5	ENSMUST00000176412	unprocessed_pseudogene		7	-1	15295548	1003
ENSMUSG00000020532	protein_coding	Acaca	ENSMUST00000137500	protein_coding		11	1	84179831	431
ENSMUSG00000081352	processed_pseudogene	Gm12389	ENSMUST00000117696	processed_pseudogene		4	-1	40117233	418
ENSMUSG00000106582	unprocessed_pseudogene	Obox4-ps24	ENSMUST00000197686	unprocessed_pseudogene		7	-1	15308054	540
ENSMUSG00000029291	protein_coding	Rufy3	ENSMUST00000199956	retained_intron		5	1	88646691	619
ENSMUSG00000020532	protein_coding	Acaca	ENSMUST00000130012	protein_coding		11	1	84179831	1058
ENSMUSG00000054302	protein_coding	Eapp	ENSMUST00000163433	protein_coding	principal1	12	-1	54695884	2658
ENSMUSG00000020532	protein_coding	Acaca	ENSMUST00000136463	protein_coding		11	1	84179858	452
ENSMUSG00000071207	processed_pseudogene	Gm8587	ENSMUST00000076538	processed_pseudogene		12	1	88089134	843
ENSMUSG00000049073	protein_coding	Olfr985	ENSMUST00000214981	protein_coding	principal1	9	-1	40130184	1879
ENSMUSG00000020695	protein_coding	Mrc2	ENSMUST00000126931	processed_transcript		11	1	105292643	831
ENSMUSG00000114108	processed_pseudogene	Gm48459	ENSMUST00000222452	processed_pseudogene		12	1	88108000	357
ENSMUSG00000020532	protein_coding	Acaca	ENSMUST00000183887	protein_coding		11	1	84280455	684
ENSMUSG00000049073	protein_coding	Olfr985	ENSMUST00000060345	protein_coding	principal1	9	-1	40128039	1116
ENSMUSG00000113677	processed_pseudogene	Gm48487	ENSMUST00000220581	processed_pseudogene		12	-1	88111161	322
ENSMUSG00000020695	protein_coding	Mrc2	ENSMUST00000021038	protein_coding		11	1	105292668	3335
ENSMUSG00000020532	protein_coding	Acaca	ENSMUST00000020843	protein_coding	principal1	11	1	84195438	9026
ENSMUSG00000020695	protein_coding	Mrc2	ENSMUST00000142905	processed_transcript		11	1	105329052	570
ENSMUSG00000102495	TEC	Gm26524	ENSMUST00000195143	TEC		1	1	24005507	388
ENSMUSG00000102495	TEC	Gm26524	ENSMUST00000192339	TEC		1	1	24005505	390
ENSMUSG00000085192	antisense	Gm12195	ENSMUST00000144990	antisense		11	-1	50135004	469
ENSMUSG00000101471	protein_coding	Gm29276	ENSMUST00000190453	protein_coding	principal1	Y	-1	42582250	932
ENSMUSG00000085271	lincRNA	E130006D01Rik	ENSMUST00000137398	lincRNA		5	-1	111761703	906
ENSMUSG00000006310	protein_coding	Zbtb32	ENSMUST00000108151	protein_coding	principal1	7	-1	30592942	1775
ENSMUSG00000041328	protein_coding	Pcf11	ENSMUST00000119954	protein_coding	principal1	7	-1	92669934	5995
ENSMUSG00000085271	lincRNA	E130006D01Rik	ENSMUST00000129065	lincRNA		5	-1	111761725	729
ENSMUSG00000085271	lincRNA	E130006D01Rik	ENSMUST00000129146	lincRNA		5	-1	111761700	510
ENSMUSG00000085919	lincRNA	Gm16019	ENSMUST00000149538	lincRNA		5	1	111742849	261
ENSMUSG00000006310	protein_coding	Zbtb32	ENSMUST00000108150	protein_coding		7	-1	30598869	854
ENSMUSG00000051452	protein_coding	Gm11437	ENSMUST00000050771	protein_coding	principal1	11	-1	84167476	1239
ENSMUSG00000041328	protein_coding	Pcf11	ENSMUST00000151177	protein_coding		7	-1	92663537	4731
ENSMUSG00000073991	protein_coding	Cnbd1	ENSMUST00000137780	protein_coding	principal1	4	-1	19122526	1331
ENSMUSG00000028465	protein_coding	Tln1	ENSMUST00000030187	protein_coding	principal1	4	-1	43562422	8393
ENSMUSG00000107923	processed_pseudogene	Gm43922	ENSMUST00000205071	processed_pseudogene		6	1	121538196	328
ENSMUSG00000041328	protein_coding	Pcf11	ENSMUST00000148539	retained_intron		7	-1	92648209	534
ENSMUSG00000006310	protein_coding	Zbtb32	ENSMUST00000144532	processed_transcript		7	-1	30598909	582
ENSMUSG00000103122	TEC	Gm37391	ENSMUST00000194891	TEC		11	1	84189593	2318
ENSMUSG00000041328	protein_coding	Pcf11	ENSMUST00000208255	protein_coding		7	-1	92669903	1720
ENSMUSG00000026154	protein_coding	Sdhaf4	ENSMUST00000027338	protein_coding	principal1	1	-1	24005656	683
ENSMUSG00000083660	processed_pseudogene	Gm11853	ENSMUST00000119687	processed_pseudogene		4	1	18472189	1384
ENSMUSG00000041328	protein_coding	Pcf11	ENSMUST00000208058	protein_coding		7	-1	92669903	461
ENSMUSG00000028465	protein_coding	Tln1	ENSMUST00000134623	protein_coding		4	-1	43547647	364
ENSMUSG00000076589	IG_V_gene	Igkv8-18	ENSMUST00000103390	IG_V_gene	principal1	6	1	70355852	395
ENSMUSG00000033080	protein_coding	Vsx1	ENSMUST00000046095	protein_coding	principal1	2	-1	150689360	3791
ENSMUSG00000028465	protein_coding	Tln1	ENSMUST00000125509	protein_coding		4	-1	43551271	836
ENSMUSG00000075164	protein_coding	Olfr1106	ENSMUST00000217650	protein_coding	principal1	2	-1	87052273	2573
ENSMUSG00000026154	protein_coding	Sdhaf4	ENSMUST00000155767	processed_transcript		1	-1	24005630	426
ENSMUSG00000041577	protein_coding	Prelp	ENSMUST00000048432	protein_coding	principal1	1	-1	133921414	3615
ENSMUSG00000036980	protein_coding	Taf6	ENSMUST00000048698	protein_coding	principal1	5	-1	138187226	2304
ENSMUSG00000028465	protein_coding	Tln1	ENSMUST00000127262	processed_transcript		4	-1	43554451	274
ENSMUSG00000087402	processed_transcript	Gm11867	ENSMUST00000133363	processed_transcript		4	1	18407349	1909
ENSMUSG00000075164	protein_coding	Olfr1106	ENSMUST00000213781	protein_coding	principal1	2	-1	87052272	2569
ENSMUSG00000113374	processed_pseudogene	Gm33654	ENSMUST00000221704	processed_pseudogene		12	-1	88113141	215
ENSMUSG00000050550	processed_pseudogene	Gm11868	ENSMUST00000121594	processed_pseudogene		4	-1	18845679	1478
ENSMUSG00000021822	protein_coding	Plau	ENSMUST00000022368	protein_coding	principal1	14	1	20836660	2342
ENSMUSG00000041577	protein_coding	Prelp	ENSMUST00000127583	processed_transcript		1	-1	133921411	823
ENSMUSG00000113187	processed_pseudogene	Gm5955	ENSMUST00000222712	processed_pseudogene		12	1	88124666	219
ENSMUSG00000015243	protein_coding	Abca1	ENSMUST00000030010	protein_coding	principal1	4	-1	53159895	10262
ENSMUSG00000036980	protein_coding	Taf6	ENSMUST00000110936	protein_coding	principal1	5	-1	138187451	2308
ENSMUSG00000075164	protein_coding	Olfr1106	ENSMUST00000099867	protein_coding	principal1	2	-1	87049234	939
ENSMUSG00000019971	protein_coding	Cep290	ENSMUST00000220346	protein_coding	principal2	10	1	100487558	8211
ENSMUSG00000080919	processed_pseudogene	Gm11854	ENSMUST00000117839	processed_pseudogene		4	-1	18472114	446
ENSMUSG00000083005	processed_pseudogene	Gm12392	ENSMUST00000118014	processed_pseudogene		4	1	18964564	938
ENSMUSG00000090208	antisense	Gm15851	ENSMUST00000160564	antisense		1	1	133906531	662
ENSMUSG00000109479	TEC	Gm44919	ENSMUST00000208587	TEC		7	1	82342268	1073
ENSMUSG00000028465	protein_coding	Tln1	ENSMUST00000130670	processed_transcript		4	-1	43562157	1376
ENSMUSG00000036980	protein_coding	Taf6	ENSMUST00000110937	protein_coding		5	-1	138187205	2093
ENSMUSG00000101455	unprocessed_pseudogene	Gm21805	ENSMUST00000190371	unprocessed_pseudogene		Y	-1	42736047	696
ENSMUSG00000083013	transcribed_processed_pseudogene	Gm12978	ENSMUST00000121250	transcribed_processed_pseudogene		4	-1	131903311	522
ENSMUSG00000019971	protein_coding	Cep290	ENSMUST00000219765	protein_coding	alternative2	10	1	100488289	7985
ENSMUSG00000064065	protein_coding	Ipcef1	ENSMUST00000086896	protein_coding		10	-1	7052478	1196
ENSMUSG00000028465	protein_coding	Tln1	ENSMUST00000130353	protein_coding		4	-1	43558460	836
ENSMUSG00000019971	protein_coding	Cep290	ENSMUST00000220231	retained_intron		10	1	100498331	903
ENSMUSG00000028465	protein_coding	Tln1	ENSMUST00000126078	processed_transcript		4	-1	43555946	283
ENSMUSG00000021822	protein_coding	Plau	ENSMUST00000224141	nonsense_mediated_decay		14	1	20836724	1437
ENSMUSG00000075163	protein_coding	Olfr1107	ENSMUST00000214049	protein_coding	principal1	2	-1	87075817	4388
ENSMUSG00000019971	protein_coding	Cep290	ENSMUST00000220331	retained_intron		10	1	100508726	423
ENSMUSG00000015243	protein_coding	Abca1	ENSMUST00000149127	processed_transcript		4	-1	53040926	775
ENSMUSG00000006281	protein_coding	Tep1	ENSMUST00000006444	protein_coding	principal1	14	-1	50870560	8171
ENSMUSG00000002428	protein_coding	Hltf	ENSMUST00000002502	protein_coding	principal1	3	1	20057811	4955
ENSMUSG00000070469	protein_coding	Adamtsl3	ENSMUST00000172490	processed_transcript		7	1	82335694	440
ENSMUSG00000118088	processed_pseudogene	Gm3815	ENSMUST00000236182	processed_pseudogene		18	1	51003104	502
ENSMUSG00000026648	protein_coding	Dclre1c	ENSMUST00000061852	protein_coding	alternative2	2	1	3424131	7075
ENSMUSG00000036980	protein_coding	Taf6	ENSMUST00000153117	nonsense_mediated_decay		5	-1	138187221	2619
ENSMUSG00000075163	protein_coding	Olfr1107	ENSMUST00000099865	protein_coding	principal1	2	-1	87072223	1109
ENSMUSG00000064065	protein_coding	Ipcef1	ENSMUST00000145156	protein_coding		10	-1	7023167	829
ENSMUSG00000028465	protein_coding	Tln1	ENSMUST00000123985	processed_transcript		4	-1	43562691	937
ENSMUSG00000110886	unprocessed_pseudogene	Olfr1108-ps1	ENSMUST00000216930	unprocessed_pseudogene		2	-1	87083385	121
ENSMUSG00000064065	protein_coding	Ipcef1	ENSMUST00000151960	protein_coding		10	-1	7000444	425
ENSMUSG00000086806	antisense	Gm13054	ENSMUST00000154192	antisense		4	-1	148004014	820
ENSMUSG00000036980	protein_coding	Taf6	ENSMUST00000130473	retained_intron		5	-1	138181468	1220
ENSMUSG00000019971	protein_coding	Cep290	ENSMUST00000218703	retained_intron		10	1	100540454	1406
ENSMUSG00000036980	protein_coding	Taf6	ENSMUST00000123415	protein_coding		5	-1	138187226	968
ENSMUSG00000006281	protein_coding	Tep1	ENSMUST00000226222	protein_coding		14	-1	50824889	434
ENSMUSG00000036980	protein_coding	Taf6	ENSMUST00000139276	protein_coding		5	-1	138187215	357
ENSMUSG00000028466	protein_coding	Creb3	ENSMUST00000126277	retained_intron		4	1	43563267	697
ENSMUSG00000036980	protein_coding	Taf6	ENSMUST00000200483	processed_transcript		5	-1	138187216	1139
ENSMUSG00000028466	protein_coding	Creb3	ENSMUST00000159923	retained_intron		4	1	43563430	320
ENSMUSG00000026648	protein_coding	Dclre1c	ENSMUST00000115066	protein_coding		2	1	3424165	3828
ENSMUSG00000063882	protein_coding	Uqcrh	ENSMUST00000050580	protein_coding		4	-1	116075031	402
ENSMUSG00000063882	protein_coding	Uqcrh	ENSMUST00000134760	processed_transcript		4	-1	116075034	579
ENSMUSG00000002428	protein_coding	Hltf	ENSMUST00000143005	nonsense_mediated_decay		3	1	20057811	3430
ENSMUSG00000026648	protein_coding	Dclre1c	ENSMUST00000102988	protein_coding	principal4	2	1	3424150	2469
ENSMUSG00000057899	protein_coding	Adgrf2	ENSMUST00000239223	protein_coding	alternative2	17	-1	42742179	2544
ENSMUSG00000041616	protein_coding	Nppa	ENSMUST00000103230	protein_coding	principal1	4	1	148000722	865
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000020580	protein_coding	principal1	10	-1	79746579	3755
ENSMUSG00000064065	protein_coding	Ipcef1	ENSMUST00000149708	processed_transcript		10	-1	6980534	631
ENSMUSG00000057899	protein_coding	Adgrf2	ENSMUST00000113614	protein_coding	principal2	17	-1	42742179	3284
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000159016	protein_coding		10	-1	79746581	3535
ENSMUSG00000027782	protein_coding	Kpna4	ENSMUST00000029353	protein_coding		3	-1	69127113	8819
ENSMUSG00000063882	protein_coding	Uqcrh	ENSMUST00000078676	protein_coding	principal1	4	-1	116075071	547
ENSMUSG00000019971	protein_coding	Cep290	ENSMUST00000219408	protein_coding		10	1	100542441	1177
ENSMUSG00000117163	processed_pseudogene	Gm5978	ENSMUST00000233378	processed_pseudogene		17	1	42727173	864
ENSMUSG00000064065	protein_coding	Ipcef1	ENSMUST00000144622	processed_transcript		10	-1	6980465	3216
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000159289	retained_intron		10	-1	79736768	395
ENSMUSG00000063882	protein_coding	Uqcrh	ENSMUST00000142468	retained_intron		4	-1	116070078	423
ENSMUSG00000086563	lincRNA	Platr15	ENSMUST00000147128	lincRNA		2	-1	150706876	768
ENSMUSG00000027782	protein_coding	Kpna4	ENSMUST00000127497	protein_coding		3	-1	69126630	459
ENSMUSG00000002428	protein_coding	Hltf	ENSMUST00000128127	retained_intron		3	1	20057820	3050
ENSMUSG00000028466	protein_coding	Creb3	ENSMUST00000102944	protein_coding	principal2	4	1	43562332	1884
ENSMUSG00000100630	lincRNA	Gm28450	ENSMUST00000187349	lincRNA		2	-1	150724621	638
ENSMUSG00000063882	protein_coding	Uqcrh	ENSMUST00000127175	retained_intron		4	-1	116075059	801
ENSMUSG00000002428	protein_coding	Hltf	ENSMUST00000155635	retained_intron		3	1	20108476	2573
ENSMUSG00000019971	protein_coding	Cep290	ENSMUST00000219643	processed_transcript		10	1	100544425	2738
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000161098	retained_intron		10	-1	79737713	702
ENSMUSG00000019971	protein_coding	Cep290	ENSMUST00000218000	retained_intron		10	1	100548864	1567
ENSMUSG00000078238	processed_pseudogene	Gm12854	ENSMUST00000128518	processed_pseudogene		4	1	116067268	297
ENSMUSG00000027782	protein_coding	Kpna4	ENSMUST00000194558	protein_coding	principal1	3	-1	69127092	3726
ENSMUSG00000006281	protein_coding	Tep1	ENSMUST00000226430	nonsense_mediated_decay		14	-1	50853085	5690
ENSMUSG00000019971	protein_coding	Cep290	ENSMUST00000219889	retained_intron		10	1	100571934	2170
ENSMUSG00000113400	processed_pseudogene	Gm8605	ENSMUST00000221619	processed_pseudogene		12	1	88125689	1370
ENSMUSG00000019971	protein_coding	Cep290	ENSMUST00000164751	protein_coding	principal2	10	1	100488289	8006
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000162694	nonsense_mediated_decay		10	-1	79746571	3749
ENSMUSG00000028466	protein_coding	Creb3	ENSMUST00000132631	protein_coding		4	1	43562947	477
ENSMUSG00000103094	TEC	Gm37558	ENSMUST00000193684	TEC		3	-1	69122724	2983
ENSMUSG00000006281	protein_coding	Tep1	ENSMUST00000228562	retained_intron		14	-1	50830071	702
ENSMUSG00000113083	processed_pseudogene	Gm48513	ENSMUST00000220586	processed_pseudogene		12	-1	88131351	405
ENSMUSG00000112000	processed_transcript	Gm47956	ENSMUST00000218156	processed_transcript		10	1	100577426	1860
ENSMUSG00000026648	protein_coding	Dclre1c	ENSMUST00000131433	retained_intron		2	1	3424202	2143
ENSMUSG00000002428	protein_coding	Hltf	ENSMUST00000145853	nonsense_mediated_decay		3	1	20058291	3628
ENSMUSG00000028466	protein_coding	Creb3	ENSMUST00000138623	retained_intron		4	1	43566015	600
ENSMUSG00000006281	protein_coding	Tep1	ENSMUST00000227526	nonsense_mediated_decay		14	-1	50833462	737
ENSMUSG00000026648	protein_coding	Dclre1c	ENSMUST00000132565	processed_transcript		2	1	3424150	655
ENSMUSG00000113348	unprocessed_pseudogene	Gm8607	ENSMUST00000221864	unprocessed_pseudogene		12	-1	88139793	431
ENSMUSG00000028466	protein_coding	Creb3	ENSMUST00000167751	protein_coding	alternative2	4	1	43562813	1212
ENSMUSG00000071172	protein_coding	Srsf3	ENSMUST00000130216	protein_coding	principal1	17	1	29032628	2618
ENSMUSG00000006281	protein_coding	Tep1	ENSMUST00000227228	retained_intron		14	-1	50833962	1274
ENSMUSG00000002428	protein_coding	Hltf	ENSMUST00000154233	retained_intron		3	1	20057853	641
ENSMUSG00000026648	protein_coding	Dclre1c	ENSMUST00000146027	processed_transcript		2	1	3424165	650
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000160838	retained_intron		10	-1	79737686	652
ENSMUSG00000006281	protein_coding	Tep1	ENSMUST00000227193	processed_transcript		14	-1	50836402	380
ENSMUSG00000026648	protein_coding	Dclre1c	ENSMUST00000152468	processed_transcript		2	1	3452949	523
ENSMUSG00000114060	processed_pseudogene	Gm18630	ENSMUST00000222109	processed_pseudogene		12	1	88153674	1397
ENSMUSG00000026648	protein_coding	Dclre1c	ENSMUST00000129657	protein_coding		2	1	3440829	679
ENSMUSG00000064065	protein_coding	Ipcef1	ENSMUST00000105617	protein_coding	principal3	10	-1	6980376	6041
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000162687	retained_intron		10	-1	79738631	1218
ENSMUSG00000094298	protein_coding	Vmn1r241	ENSMUST00000169774	protein_coding	principal1	7	-1	20205607	924
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000162679	retained_intron		10	-1	79739375	602
ENSMUSG00000109001	lincRNA	Gm45024	ENSMUST00000208274	lincRNA		7	-1	109224200	623
ENSMUSG00000006281	protein_coding	Tep1	ENSMUST00000226789	retained_intron		14	-1	50854152	551
ENSMUSG00000028911	protein_coding	Srsf4	ENSMUST00000053819	protein_coding	principal1	4	1	131873617	2257
ENSMUSG00000020329	protein_coding	Polrmt	ENSMUST00000161375	processed_transcript		10	-1	79746573	411
ENSMUSG00000097431	antisense	Gm26782	ENSMUST00000227351	antisense		14	1	50870324	800
ENSMUSG00000026648	protein_coding	Dclre1c	ENSMUST00000100463	protein_coding	alternative2	2	1	3424131	3705
ENSMUSG00000054746	protein_coding	Abca15	ENSMUST00000207220	protein_coding		7	1	120328670	567
ENSMUSG00000082243	processed_pseudogene	Gm3810	ENSMUST00000122413	processed_pseudogene		11	-1	27508100	476
ENSMUSG00000064065	protein_coding	Ipcef1	ENSMUST00000154998	processed_transcript		10	-1	6980314	3077
ENSMUSG00000112718	processed_pseudogene	Gm48524	ENSMUST00000220174	processed_pseudogene		12	1	31562866	360
ENSMUSG00000085043	antisense	Gm13184	ENSMUST00000149932	antisense		2	1	3468613	626
ENSMUSG00000064065	protein_coding	Ipcef1	ENSMUST00000078070	protein_coding	alternative2	10	-1	6979711	1308
ENSMUSG00000064065	protein_coding	Ipcef1	ENSMUST00000170680	protein_coding		10	-1	7023185	1174
ENSMUSG00000020634	protein_coding	Ubxn2a	ENSMUST00000020962	protein_coding	principal1	12	-1	4907705	2696
ENSMUSG00000111657	lincRNA	Gm31592	ENSMUST00000217529	lincRNA		10	1	91888829	3471
ENSMUSG00000081926	processed_pseudogene	Gm15536	ENSMUST00000121411	processed_pseudogene		10	1	7038661	114
ENSMUSG00000097431	antisense	Gm26782	ENSMUST00000227207	antisense		14	1	50870363	636
ENSMUSG00000102518	TEC	Gm38339	ENSMUST00000195479	TEC		1	-1	80148801	1829
ENSMUSG00000020634	protein_coding	Ubxn2a	ENSMUST00000142867	protein_coding	principal1	12	-1	4907264	2146
ENSMUSG00000040541	protein_coding	Tmem225	ENSMUST00000046333	protein_coding	principal1	9	1	40148122	987
ENSMUSG00000010311	protein_coding	Optc	ENSMUST00000124051	protein_coding	principal1	1	-1	133907172	1885
ENSMUSG00000097431	antisense	Gm26782	ENSMUST00000228078	antisense		14	1	50870363	392
ENSMUSG00000097431	antisense	Gm26782	ENSMUST00000227103	antisense		14	1	50870363	751
ENSMUSG00000044595	protein_coding	Dnd1	ENSMUST00000155827	retained_intron		18	-1	36766214	1804
ENSMUSG00000028911	protein_coding	Srsf4	ENSMUST00000129966	nonsense_mediated_decay		4	1	131873816	851
ENSMUSG00000020634	protein_coding	Ubxn2a	ENSMUST00000141360	nonsense_mediated_decay		12	-1	4907439	965
ENSMUSG00000097431	antisense	Gm26782	ENSMUST00000181697	antisense		14	1	50870364	971
ENSMUSG00000040541	protein_coding	Tmem225	ENSMUST00000238613	protein_coding		9	1	40148145	563
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000200680	protein_coding	principal1	6	1	85911877	814
ENSMUSG00000099700	lincRNA	Gm29645	ENSMUST00000189117	lincRNA		Y	1	42770805	174
ENSMUSG00000054746	protein_coding	Abca15	ENSMUST00000140459	retained_intron		7	1	120328684	2536
ENSMUSG00000097431	antisense	Gm26782	ENSMUST00000181482	antisense		14	1	50870376	2513
ENSMUSG00000117453	processed_pseudogene	Gm2424	ENSMUST00000234777	processed_pseudogene		18	1	9909193	1103
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000201289	processed_transcript		6	1	85911891	573
ENSMUSG00000097431	antisense	Gm26782	ENSMUST00000228254	antisense		14	1	50870384	645
ENSMUSG00000101811	lincRNA	Gm28312	ENSMUST00000185976	lincRNA		Y	1	42833153	174
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000201217	processed_transcript		6	1	85911907	457
ENSMUSG00000027317	protein_coding	Ppp1r14d	ENSMUST00000076084	protein_coding	principal1	2	-1	119229906	787
ENSMUSG00000028911	protein_coding	Srsf4	ENSMUST00000134943	nonsense_mediated_decay		4	1	131884295	980
ENSMUSG00000020785	protein_coding	Camkk1	ENSMUST00000092937	protein_coding	principal1	11	1	73019043	3424
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000202588	retained_intron		6	1	85914082	1964
ENSMUSG00000010311	protein_coding	Optc	ENSMUST00000153617	protein_coding		1	-1	133907999	1615
ENSMUSG00000099349	lincRNA	1700047G03Rik	ENSMUST00000191278	lincRNA		15	1	11964276	347
ENSMUSG00000092039	processed_pseudogene	Gm5501	ENSMUST00000165917	processed_pseudogene		18	1	9916927	832
ENSMUSG00000020785	protein_coding	Camkk1	ENSMUST00000145834	protein_coding		11	1	73026585	1029
ENSMUSG00000105366	TEC	Gm43719	ENSMUST00000200088	TEC		5	1	13604035	2199
ENSMUSG00000025144	protein_coding	Cenpx	ENSMUST00000128543	processed_transcript		11	-1	120711983	758
ENSMUSG00000028911	protein_coding	Srsf4	ENSMUST00000030743	retained_intron		4	1	131885208	3100
ENSMUSG00000099349	lincRNA	1700047G03Rik	ENSMUST00000188888	lincRNA		15	1	11964337	992
ENSMUSG00000099833	unprocessed_pseudogene	Gm29165	ENSMUST00000190655	unprocessed_pseudogene		Y	1	42931751	664
ENSMUSG00000099349	lincRNA	1700047G03Rik	ENSMUST00000186347	lincRNA		15	1	11964424	355
ENSMUSG00000099349	lincRNA	1700047G03Rik	ENSMUST00000227915	lincRNA		15	1	11966760	990
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000113751	protein_coding		6	1	85915719	692
ENSMUSG00000102602	TEC	A930004J17Rik	ENSMUST00000192689	TEC		4	1	131878628	4610
ENSMUSG00000099349	lincRNA	1700047G03Rik	ENSMUST00000227822	lincRNA		15	1	11966778	1048
ENSMUSG00000027317	protein_coding	Ppp1r14d	ENSMUST00000110820	protein_coding		2	-1	119229865	790
ENSMUSG00000104905	TEC	Gm43718	ENSMUST00000197524	TEC		5	-1	13617815	1857
ENSMUSG00000116698	processed_pseudogene	Gm49676	ENSMUST00000232159	processed_pseudogene		16	1	75147233	597
ENSMUSG00000010311	protein_coding	Optc	ENSMUST00000149380	protein_coding		1	-1	133907126	1180
ENSMUSG00000070469	protein_coding	Adamtsl3	ENSMUST00000173287	protein_coding	principal1	7	1	82335732	7249
ENSMUSG00000071172	protein_coding	Srsf3	ENSMUST00000037776	nonsense_mediated_decay		17	1	29032632	2594
ENSMUSG00000085667	processed_transcript	Gm12992	ENSMUST00000132111	processed_transcript		4	-1	131915516	1453
ENSMUSG00000099349	lincRNA	1700047G03Rik	ENSMUST00000190000	lincRNA		15	1	11967062	825
ENSMUSG00000099552	lincRNA	9830004L10Rik	ENSMUST00000191325	lincRNA		1	1	80184719	2156
ENSMUSG00000099552	lincRNA	9830004L10Rik	ENSMUST00000188074	lincRNA		1	1	80186950	687
ENSMUSG00000010311	protein_coding	Optc	ENSMUST00000126123	protein_coding		1	-1	133907002	1001
ENSMUSG00000070469	protein_coding	Adamtsl3	ENSMUST00000173828	protein_coding		7	1	82337218	2292
ENSMUSG00000020413	protein_coding	Hus1	ENSMUST00000020683	protein_coding	principal1	11	-1	9011191	4640
ENSMUSG00000044595	protein_coding	Dnd1	ENSMUST00000061522	protein_coding	principal1	18	-1	36766198	1451
ENSMUSG00000099552	lincRNA	9830004L10Rik	ENSMUST00000185548	lincRNA		1	1	80186972	2177
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000202803	protein_coding		6	1	85915738	716
ENSMUSG00000010311	protein_coding	Optc	ENSMUST00000124245	retained_intron		1	-1	133901327	1579
ENSMUSG00000071172	protein_coding	Srsf3	ENSMUST00000147265	retained_intron		17	1	29032649	4010
ENSMUSG00000085667	processed_transcript	Gm12992	ENSMUST00000124738	processed_transcript		4	-1	131920029	4493
ENSMUSG00000071172	protein_coding	Srsf3	ENSMUST00000233885	retained_intron		17	1	29032673	2836
ENSMUSG00000115657	antisense	Gm41325	ENSMUST00000228250	antisense		15	1	55084561	246
ENSMUSG00000044595	protein_coding	Dnd1	ENSMUST00000124038	retained_intron		18	-1	36766198	2057
ENSMUSG00000020413	protein_coding	Hus1	ENSMUST00000129115	nonsense_mediated_decay		11	-1	9011160	4172
ENSMUSG00000070469	protein_coding	Adamtsl3	ENSMUST00000174495	retained_intron		7	1	82408474	845
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000113753	protein_coding	principal1	6	1	85915738	2222
ENSMUSG00000071172	protein_coding	Srsf3	ENSMUST00000233209	processed_transcript		17	1	29032689	518
ENSMUSG00000070469	protein_coding	Adamtsl3	ENSMUST00000172784	protein_coding		7	1	82611777	497
ENSMUSG00000043230	protein_coding	Fam124b	ENSMUST00000058748	protein_coding	principal1	1	-1	80213944	2855
ENSMUSG00000108223	processed_pseudogene	Gm43933	ENSMUST00000203893	processed_pseudogene		6	-1	121547860	267
ENSMUSG00000000355	protein_coding	Mcts1	ENSMUST00000000365	protein_coding	principal1	X	1	38600655	783
ENSMUSG00000066072	protein_coding	Cyp4a10	ENSMUST00000058785	protein_coding	principal2	4	1	115518264	2109
ENSMUSG00000107752	processed_pseudogene	Gm43934	ENSMUST00000205095	processed_pseudogene		6	1	121560201	388
ENSMUSG00000071172	protein_coding	Srsf3	ENSMUST00000233127	processed_transcript		17	1	29032689	319
ENSMUSG00000031756	protein_coding	Cenpn	ENSMUST00000212578	retained_intron		8	1	116921730	447
ENSMUSG00000043230	protein_coding	Fam124b	ENSMUST00000161427	processed_transcript		1	-1	80218473	726
ENSMUSG00000071172	protein_coding	Srsf3	ENSMUST00000144551	retained_intron		17	1	29036379	893
ENSMUSG00000066072	protein_coding	Cyp4a10	ENSMUST00000094886	protein_coding	alternative2	4	1	115518288	2052
ENSMUSG00000071172	protein_coding	Srsf3	ENSMUST00000233010	nonsense_mediated_decay		17	1	29039454	526
ENSMUSG00000068699	protein_coding	Flnc	ENSMUST00000101617	protein_coding	principal1	6	1	29433276	8939
ENSMUSG00000101257	lincRNA	2310015K22Rik	ENSMUST00000191452	lincRNA		1	1	80225044	1461
ENSMUSG00000103404	TEC	Gm37932	ENSMUST00000192258	TEC		1	-1	80256197	1167
ENSMUSG00000000355	protein_coding	Mcts1	ENSMUST00000134573	processed_transcript		X	1	38601299	764
ENSMUSG00000024302	protein_coding	Dtna	ENSMUST00000222515	protein_coding		18	1	23415135	359
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000089570	protein_coding		6	1	85915747	1216
ENSMUSG00000114684	unprocessed_pseudogene	Vmn2r-ps105	ENSMUST00000224225	unprocessed_pseudogene		13	1	66512195	1329
ENSMUSG00000000355	protein_coding	Mcts1	ENSMUST00000140204	processed_transcript		X	1	38600578	501
ENSMUSG00000068699	protein_coding	Flnc	ENSMUST00000065090	protein_coding		6	1	29433276	9038
ENSMUSG00000024302	protein_coding	Dtna	ENSMUST00000221471	processed_transcript		18	1	23415429	723
ENSMUSG00000000355	protein_coding	Mcts1	ENSMUST00000133128	processed_transcript		X	1	38608723	431
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000067137	protein_coding	principal1	6	1	85915747	2103
ENSMUSG00000071172	protein_coding	Srsf3	ENSMUST00000150157	retained_intron		17	1	29039518	2110
ENSMUSG00000097483	lincRNA	Gm26806	ENSMUST00000181516	lincRNA		13	-1	66519523	1094
ENSMUSG00000071172	protein_coding	Srsf3	ENSMUST00000233105	processed_transcript		17	1	29039694	594
ENSMUSG00000097483	lincRNA	Gm26806	ENSMUST00000180403	lincRNA		13	-1	66519887	1519
ENSMUSG00000081181	processed_pseudogene	Gm13353	ENSMUST00000120891	processed_pseudogene		2	1	18568126	73
ENSMUSG00000000355	protein_coding	Mcts1	ENSMUST00000148938	processed_transcript		X	1	38609803	434
ENSMUSG00000020472	protein_coding	Zkscan17	ENSMUST00000013262	protein_coding	principal1	11	-1	59506644	4064
ENSMUSG00000020413	protein_coding	Hus1	ENSMUST00000152890	retained_intron		11	-1	9011128	2792
ENSMUSG00000070977	unprocessed_pseudogene	Defb44-ps	ENSMUST00000126871	unprocessed_pseudogene		1	-1	18223564	219
ENSMUSG00000020413	protein_coding	Hus1	ENSMUST00000127578	processed_transcript		11	-1	9011128	433
ENSMUSG00000115576	lincRNA	Gm2675	ENSMUST00000227769	lincRNA		15	1	58405824	1390
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000113752	protein_coding	principal1	6	1	85915755	749
ENSMUSG00000020413	protein_coding	Hus1	ENSMUST00000146002	retained_intron		11	-1	9010678	742
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000150249	processed_transcript		6	1	85915756	381
ENSMUSG00000102016	lincRNA	Gm29606	ENSMUST00000188564	lincRNA		Y	1	79773450	1498
ENSMUSG00000020413	protein_coding	Hus1	ENSMUST00000139877	retained_intron		11	-1	9011164	2114
ENSMUSG00000037541	protein_coding	Shank2	ENSMUST00000105902	protein_coding	principal1	7	1	144001928	8988
ENSMUSG00000042660	protein_coding	Wdr55	ENSMUST00000049323	protein_coding	principal1	18	1	36760220	1619
ENSMUSG00000102016	lincRNA	Gm29606	ENSMUST00000187995	lincRNA		Y	1	79773904	440
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000201939	protein_coding		6	1	85915757	475
ENSMUSG00000037541	protein_coding	Shank2	ENSMUST00000213146	protein_coding		7	1	144031264	2449
ENSMUSG00000020472	protein_coding	Zkscan17	ENSMUST00000101150	protein_coding		11	-1	59506644	3771
ENSMUSG00000082943	processed_pseudogene	Gm13355	ENSMUST00000117996	processed_pseudogene		2	-1	18642102	317
ENSMUSG00000050144	protein_coding	Slc25a44	ENSMUST00000168755	protein_coding		3	-1	88425107	3418
ENSMUSG00000113592	unprocessed_pseudogene	Gm7093	ENSMUST00000223004	unprocessed_pseudogene		12	1	18332873	581
ENSMUSG00000101340	unprocessed_pseudogene	Gm29607	ENSMUST00000191009	unprocessed_pseudogene		Y	-1	79884295	696
ENSMUSG00000054226	protein_coding	Tprkb	ENSMUST00000149026	protein_coding		6	1	85915798	818
ENSMUSG00000078640	protein_coding	Gm11627	ENSMUST00000139829	processed_transcript		11	-1	102579275	796
ENSMUSG00000113132	processed_pseudogene	Gm9231	ENSMUST00000220817	processed_pseudogene		12	1	18364462	1009
ENSMUSG00000046567	protein_coding	4930430F08Rik	ENSMUST00000054471	protein_coding	principal1	10	-1	100589395	2564
ENSMUSG00000042660	protein_coding	Wdr55	ENSMUST00000236324	retained_intron		18	1	36761974	777
ENSMUSG00000113402	processed_pseudogene	Gm40848	ENSMUST00000221998	processed_pseudogene		12	1	18387755	324
ENSMUSG00000099972	processed_pseudogene	Gm21248	ENSMUST00000187765	processed_pseudogene		Y	-1	79959081	696
ENSMUSG00000113436	processed_pseudogene	Gm48392	ENSMUST00000222355	processed_pseudogene		12	1	18505722	148
ENSMUSG00000086882	processed_pseudogene	Gm13352	ENSMUST00000117515	processed_pseudogene		2	-1	18649346	262
ENSMUSG00000042660	protein_coding	Wdr55	ENSMUST00000235748	nonsense_mediated_decay		18	1	36762658	332
ENSMUSG00000101733	unprocessed_pseudogene	Gm29189	ENSMUST00000188018	unprocessed_pseudogene		Y	-1	79986233	615
ENSMUSG00000108695	lincRNA	Gm2511	ENSMUST00000206158	lincRNA		7	-1	43516318	455
ENSMUSG00000037541	protein_coding	Shank2	ENSMUST00000105900	protein_coding		7	1	144175529	8169
ENSMUSG00000020472	protein_coding	Zkscan17	ENSMUST00000134522	processed_transcript		11	-1	59506220	937
ENSMUSG00000037541	protein_coding	Shank2	ENSMUST00000239495	protein_coding		7	1	144238725	4604
ENSMUSG00000094757	protein_coding	Vmn1r242	ENSMUST00000168580	protein_coding	principal1	7	-1	20233828	921
ENSMUSG00000111421	TEC	Gm47643	ENSMUST00000214258	TEC		9	-1	37299361	3236
ENSMUSG00000073197	protein_coding	5730507C01Rik	ENSMUST00000177778	protein_coding	alternative2	12	1	18514510	2542
ENSMUSG00000020472	protein_coding	Zkscan17	ENSMUST00000139093	processed_transcript		11	-1	59526631	361
ENSMUSG00000111738	processed_pseudogene	Gm18329	ENSMUST00000215832	processed_pseudogene		9	1	37275260	589
ENSMUSG00000109360	processed_pseudogene	Gm18049	ENSMUST00000208909	processed_pseudogene		7	1	20258291	581
ENSMUSG00000108695	lincRNA	Gm2511	ENSMUST00000205521	lincRNA		7	-1	43518970	457
ENSMUSG00000073197	protein_coding	5730507C01Rik	ENSMUST00000063216	protein_coding	principal3	12	1	18514546	2431
ENSMUSG00000020472	protein_coding	Zkscan17	ENSMUST00000129941	processed_transcript		11	-1	59506220	423
ENSMUSG00000111481	TEC	Gm47652	ENSMUST00000217345	TEC		9	-1	37334429	4663
ENSMUSG00000003070	protein_coding	Efna2	ENSMUST00000003154	protein_coding	principal1	10	1	80179482	2131
ENSMUSG00000084064	processed_pseudogene	Gm12079	ENSMUST00000112483	processed_pseudogene		11	1	27883112	244
ENSMUSG00000002565	protein_coding	Scin	ENSMUST00000002640	protein_coding	principal1	12	-1	40134228	2995
ENSMUSG00000046567	protein_coding	4930430F08Rik	ENSMUST00000219410	processed_transcript		10	-1	100590423	1128
ENSMUSG00000078640	protein_coding	Gm11627	ENSMUST00000107080	protein_coding	principal1	11	-1	102579119	585
ENSMUSG00000020472	protein_coding	Zkscan17	ENSMUST00000139707	processed_transcript		11	-1	59526751	360
ENSMUSG00000108695	lincRNA	Gm2511	ENSMUST00000206605	lincRNA		7	-1	43518547	563
ENSMUSG00000046567	protein_coding	4930430F08Rik	ENSMUST00000219790	processed_transcript		10	-1	100589024	970
ENSMUSG00000098158	transcribed_processed_pseudogene	Gm4804	ENSMUST00000222542	processed_transcript		12	1	15606412	577
ENSMUSG00000078640	protein_coding	Gm11627	ENSMUST00000107081	protein_coding	principal1	11	-1	102579461	818
ENSMUSG00000046567	protein_coding	4930430F08Rik	ENSMUST00000218328	protein_coding		10	-1	100589030	673
ENSMUSG00000109166	protein_coding	Gm5890	ENSMUST00000190145	protein_coding	principal1	7	-1	20262834	1336
ENSMUSG00000098158	transcribed_processed_pseudogene	Gm4804	ENSMUST00000221185	processed_transcript		12	1	15717600	743
ENSMUSG00000111748	antisense	Gm34885	ENSMUST00000217440	antisense		9	1	37312136	4070
ENSMUSG00000107438	processed_pseudogene	Gm43945	ENSMUST00000203595	processed_pseudogene		6	1	121625712	754
ENSMUSG00000098158	transcribed_processed_pseudogene	Gm4804	ENSMUST00000223207	processed_transcript		12	1	15725913	483
ENSMUSG00000083201	processed_pseudogene	Gm12080	ENSMUST00000119821	processed_pseudogene		11	1	28046035	1883
ENSMUSG00000037541	protein_coding	Shank2	ENSMUST00000146006	protein_coding		7	1	144284439	7666
ENSMUSG00000050144	protein_coding	Slc25a44	ENSMUST00000193433	protein_coding	principal1	3	-1	88425108	3429
ENSMUSG00000046567	protein_coding	4930430F08Rik	ENSMUST00000219995	retained_intron		10	-1	100589248	4200
ENSMUSG00000046567	protein_coding	4930430F08Rik	ENSMUST00000219698	retained_intron		10	-1	100586643	1297
ENSMUSG00000046567	protein_coding	4930430F08Rik	ENSMUST00000218821	protein_coding		10	-1	100589235	562
ENSMUSG00000098158	transcribed_processed_pseudogene	Gm4804	ENSMUST00000182234	transcribed_processed_pseudogene		12	1	15728097	999
ENSMUSG00000032889	processed_pseudogene	Gm6685	ENSMUST00000042595	processed_pseudogene		11	-1	28339814	687
ENSMUSG00000109019	processed_pseudogene	Gm18455	ENSMUST00000208768	processed_pseudogene		7	1	20270710	459
ENSMUSG00000037541	protein_coding	Shank2	ENSMUST00000097929	protein_coding		7	1	144284545	4418
ENSMUSG00000046567	protein_coding	4930430F08Rik	ENSMUST00000218929	processed_transcript		10	-1	100589165	491
ENSMUSG00000002565	protein_coding	Scin	ENSMUST00000078481	protein_coding		12	-1	40134183	2654
ENSMUSG00000084905	antisense	Gm12081	ENSMUST00000152849	antisense		11	1	28360362	501
ENSMUSG00000037541	protein_coding	Shank2	ENSMUST00000136979	processed_transcript		7	1	144417825	641
ENSMUSG00000102019	unprocessed_pseudogene	Gm21873	ENSMUST00000186728	unprocessed_pseudogene		Y	-1	80023128	696
ENSMUSG00000101465	lincRNA	Gm29190	ENSMUST00000188255	lincRNA		Y	1	80071842	1499
ENSMUSG00000050144	protein_coding	Slc25a44	ENSMUST00000195657	protein_coding	principal1	3	-1	88425112	3504
ENSMUSG00000101465	lincRNA	Gm29190	ENSMUST00000191600	lincRNA		Y	1	80072295	438
ENSMUSG00000050144	protein_coding	Slc25a44	ENSMUST00000057935	protein_coding		3	-1	88425139	3577
ENSMUSG00000021797	protein_coding	9230112D13Rik	ENSMUST00000022325	protein_coding	principal1	14	-1	34522801	778
ENSMUSG00000107385	processed_transcript	C330024D21Rik	ENSMUST00000201973	retained_intron		5	1	67463897	2764
ENSMUSG00000115582	processed_pseudogene	Gm48953	ENSMUST00000227512	processed_pseudogene		14	1	34516195	482
ENSMUSG00000104043	protein_coding	Gm6525	ENSMUST00000193882	protein_coding	principal1	3	1	84174104	1029
ENSMUSG00000022422	protein_coding	Dscc1	ENSMUST00000023059	protein_coding	principal1	15	-1	55090491	1324
ENSMUSG00000114014	antisense	Gm48350	ENSMUST00000223486	antisense		13	-1	95023790	851
ENSMUSG00000113871	processed_pseudogene	Gm48349	ENSMUST00000221950	processed_pseudogene		13	1	95002358	467
ENSMUSG00000054746	protein_coding	Abca15	ENSMUST00000121265	protein_coding	alternative2	7	1	120328684	5335
ENSMUSG00000107385	processed_transcript	C330024D21Rik	ENSMUST00000202634	lincRNA		5	1	67463900	2020
ENSMUSG00000054893	protein_coding	Zfp667	ENSMUST00000086327	protein_coding	principal1	7	1	6286579	3672
ENSMUSG00000025144	protein_coding	Cenpx	ENSMUST00000106154	protein_coding		11	-1	120713732	873
ENSMUSG00000107385	processed_transcript	C330024D21Rik	ENSMUST00000202828	lincRNA		5	1	67463903	1714
ENSMUSG00000100465	lincRNA	Gm29264	ENSMUST00000191240	lincRNA		5	-1	149247682	1264
ENSMUSG00000022422	protein_coding	Dscc1	ENSMUST00000110231	protein_coding		15	-1	55090480	1499
ENSMUSG00000106947	TEC	1700025A08Rik	ENSMUST00000200753	TEC		5	-1	67607826	609
ENSMUSG00000054746	protein_coding	Abca15	ENSMUST00000076272	protein_coding	principal2	7	1	120328684	5335
ENSMUSG00000054893	protein_coding	Zfp667	ENSMUST00000153840	protein_coding		7	1	6286593	596
ENSMUSG00000022422	protein_coding	Dscc1	ENSMUST00000143523	retained_intron		15	-1	55087757	3281
ENSMUSG00000100783	lincRNA	2310047D07Rik	ENSMUST00000189493	lincRNA		5	1	149231332	735
ENSMUSG00000114728	processed_pseudogene	Gm6128	ENSMUST00000225216	processed_pseudogene		14	-1	20856421	408
ENSMUSG00000025144	protein_coding	Cenpx	ENSMUST00000106155	protein_coding		11	-1	120713732	700
ENSMUSG00000116867	TEC	Gm49677	ENSMUST00000232003	TEC		16	-1	75399274	3677
ENSMUSG00000116610	lincRNA	Gm49678	ENSMUST00000232503	lincRNA		16	-1	75447293	434
ENSMUSG00000100783	lincRNA	2310047D07Rik	ENSMUST00000189639	lincRNA		5	1	149237154	707
ENSMUSG00000031756	protein_coding	Cenpn	ENSMUST00000034205	protein_coding	principal1	8	1	116921740	1768
ENSMUSG00000054893	protein_coding	Zfp667	ENSMUST00000170776	protein_coding	principal1	7	1	6286614	3685
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000201821	protein_coding		5	-1	30959234	5118
ENSMUSG00000025144	protein_coding	Cenpx	ENSMUST00000055424	protein_coding	principal1	11	-1	120713738	606
ENSMUSG00000094763	lincRNA	Gm1647	ENSMUST00000195406	lincRNA		3	1	69131233	735
ENSMUSG00000031756	protein_coding	Cenpn	ENSMUST00000212775	protein_coding		8	1	116921747	837
ENSMUSG00000072893	processed_transcript	4933439C10Rik	ENSMUST00000138763	processed_transcript		11	1	59505662	2624
ENSMUSG00000029730	protein_coding	Mcm7	ENSMUST00000000505	protein_coding	principal1	5	-1	138172422	2962
ENSMUSG00000101791	lincRNA	2210011K15Rik	ENSMUST00000190690	lincRNA		1	-1	121359900	1741
ENSMUSG00000054893	protein_coding	Zfp667	ENSMUST00000108562	protein_coding	principal1	7	1	6287868	3498
ENSMUSG00000031756	protein_coding	Cenpn	ENSMUST00000212263	protein_coding		8	1	116922327	1616
ENSMUSG00000054893	protein_coding	Zfp667	ENSMUST00000147784	retained_intron		7	1	6290534	897
ENSMUSG00000025144	protein_coding	Cenpx	ENSMUST00000026137	protein_coding		11	-1	120713738	692
ENSMUSG00000098207	protein_coding	Arl14	ENSMUST00000183126	protein_coding	principal1	3	1	69222419	1200
ENSMUSG00000031756	protein_coding	Cenpn	ENSMUST00000212184	retained_intron		8	1	116926109	2497
ENSMUSG00000029730	protein_coding	Mcm7	ENSMUST00000125316	retained_intron		5	-1	138165716	986
ENSMUSG00000072893	processed_transcript	4933439C10Rik	ENSMUST00000145533	processed_transcript		11	1	59505685	1883
ENSMUSG00000104638	lincRNA	4930568A13Rik	ENSMUST00000199961	lincRNA		5	-1	13808343	1061
ENSMUSG00000029730	protein_coding	Mcm7	ENSMUST00000148879	protein_coding		5	-1	138171818	1351
ENSMUSG00000090991	unprocessed_pseudogene	Gm6647	ENSMUST00000170514	unprocessed_pseudogene		5	1	13768662	641
ENSMUSG00000072893	processed_transcript	4933439C10Rik	ENSMUST00000123388	processed_transcript		11	1	59506097	344
ENSMUSG00000087216	antisense	E130111B04Rik	ENSMUST00000156781	antisense		11	-1	102035084	450
ENSMUSG00000051095	protein_coding	Olfr986	ENSMUST00000218134	protein_coding	principal1	9	1	40180920	3487
ENSMUSG00000072893	processed_transcript	4933439C10Rik	ENSMUST00000137442	processed_transcript		11	1	59506153	1414
ENSMUSG00000108702	processed_pseudogene	Gm9333	ENSMUST00000205452	processed_pseudogene		7	1	134660335	1323
ENSMUSG00000051095	protein_coding	Olfr986	ENSMUST00000216720	protein_coding	principal1	9	1	40180920	3381
ENSMUSG00000049858	protein_coding	Suox	ENSMUST00000054764	protein_coding	principal1	10	-1	128674073	2497
ENSMUSG00000072893	processed_transcript	4933439C10Rik	ENSMUST00000132226	processed_transcript		11	1	59506668	3184
ENSMUSG00000051095	protein_coding	Olfr986	ENSMUST00000214763	protein_coding	principal1	9	1	40180921	3274
ENSMUSG00000072893	processed_transcript	4933439C10Rik	ENSMUST00000130570	processed_transcript		11	1	59507641	575
ENSMUSG00000051095	protein_coding	Olfr986	ENSMUST00000062229	protein_coding	principal1	9	1	40187079	1016
ENSMUSG00000106568	processed_pseudogene	Gm42814	ENSMUST00000199370	processed_pseudogene		3	1	88428936	460
ENSMUSG00000029730	protein_coding	Mcm7	ENSMUST00000142254	retained_intron		5	-1	138170381	1023
ENSMUSG00000118400	processed_pseudogene	Gm6336	ENSMUST00000238743	processed_pseudogene		10	-1	128676649	492
ENSMUSG00000100987	lincRNA	Gm1627	ENSMUST00000188504	lincRNA		1	1	133962162	2588
ENSMUSG00000029736	protein_coding	Nobox	ENSMUST00000031749	protein_coding	principal1	6	-1	43309554	1893
ENSMUSG00000090041	processed_pseudogene	Gm16027	ENSMUST00000161618	processed_pseudogene		19	1	40615886	758
ENSMUSG00000090743	processed_pseudogene	Gm17213	ENSMUST00000165161	processed_pseudogene		3	-1	69432368	1360
ENSMUSG00000090941	processed_pseudogene	Gm17212	ENSMUST00000166666	processed_pseudogene		3	-1	69335760	259
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000163023	processed_transcript		19	1	40612366	319
ENSMUSG00000091315	processed_pseudogene	Gm17214	ENSMUST00000164501	processed_pseudogene		3	-1	69320585	541
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000160286	processed_transcript		19	1	40612389	380
ENSMUSG00000067855	protein_coding	Speer3	ENSMUST00000124677	protein_coding	principal1	5	1	13791619	1192
ENSMUSG00000029387	protein_coding	Gtf2h3	ENSMUST00000031333	protein_coding	principal1	5	1	124579140	2672
ENSMUSG00000035620	protein_coding	Ric8b	ENSMUST00000038523	protein_coding	principal1	10	1	84917616	3069
ENSMUSG00000029736	protein_coding	Nobox	ENSMUST00000183706	processed_transcript		6	-1	43305135	920
ENSMUSG00000036644	protein_coding	Tbc1d9b	ENSMUST00000093138	protein_coding	principal3	11	1	50131396	4407
ENSMUSG00000029387	protein_coding	Gtf2h3	ENSMUST00000200670	retained_intron		5	1	124579142	2531
ENSMUSG00000105833	processed_pseudogene	Gm4751	ENSMUST00000200620	processed_pseudogene		5	1	13763618	1105
ENSMUSG00000035620	protein_coding	Ric8b	ENSMUST00000214693	protein_coding		10	1	84917654	834
ENSMUSG00000029736	protein_coding	Nobox	ENSMUST00000172554	protein_coding		6	-1	43307236	1039
ENSMUSG00000004394	protein_coding	Tmed4	ENSMUST00000004508	protein_coding	principal1	11	-1	6274870	2003
ENSMUSG00000101247	lincRNA	Gm29042	ENSMUST00000191564	lincRNA		Y	1	42975149	166
ENSMUSG00000036644	protein_coding	Tbc1d9b	ENSMUST00000101270	protein_coding	alternative2	11	1	50131396	5213
ENSMUSG00000035620	protein_coding	Ric8b	ENSMUST00000095385	protein_coding		10	1	84917656	2909
ENSMUSG00000004394	protein_coding	Tmed4	ENSMUST00000132147	protein_coding		11	-1	6274865	542
ENSMUSG00000099408	lincRNA	Gm28311	ENSMUST00000185236	lincRNA		Y	-1	43050744	1497
ENSMUSG00000099408	lincRNA	Gm28311	ENSMUST00000189442	lincRNA		Y	-1	43050291	436
ENSMUSG00000036644	protein_coding	Tbc1d9b	ENSMUST00000147628	processed_transcript		11	1	50131402	668
ENSMUSG00000029387	protein_coding	Gtf2h3	ENSMUST00000126466	retained_intron		5	1	124579166	734
ENSMUSG00000036644	protein_coding	Tbc1d9b	ENSMUST00000126758	processed_transcript		11	1	50135427	560
ENSMUSG00000035620	protein_coding	Ric8b	ENSMUST00000217175	processed_transcript		10	1	84937393	2512
ENSMUSG00000000711	protein_coding	Rab5b	ENSMUST00000000727	protein_coding	principal1	10	-1	128696264	3180
ENSMUSG00000101207	lincRNA	Gm28310	ENSMUST00000191136	lincRNA		Y	-1	43079631	1493
ENSMUSG00000004394	protein_coding	Tmed4	ENSMUST00000130621	retained_intron		11	-1	6274870	886
ENSMUSG00000036644	protein_coding	Tbc1d9b	ENSMUST00000137852	processed_transcript		11	1	50145183	578
ENSMUSG00000025451	protein_coding	Paip1	ENSMUST00000109203	protein_coding	alternative1	13	1	119428601	1525
ENSMUSG00000035620	protein_coding	Ric8b	ENSMUST00000214820	processed_transcript		10	1	85008716	3516
ENSMUSG00000101207	lincRNA	Gm28310	ENSMUST00000189637	lincRNA		Y	-1	43079178	431
ENSMUSG00000036644	protein_coding	Tbc1d9b	ENSMUST00000148887	processed_transcript		11	1	50146572	613
ENSMUSG00000099542	unprocessed_pseudogene	Gm28504	ENSMUST00000190977	unprocessed_pseudogene		Y	-1	43171776	666
ENSMUSG00000000711	protein_coding	Rab5b	ENSMUST00000220593	retained_intron		10	-1	128696257	1629
ENSMUSG00000090793	unprocessed_pseudogene	Gm6650	ENSMUST00000166710	unprocessed_pseudogene		5	1	13811242	614
ENSMUSG00000036644	protein_coding	Tbc1d9b	ENSMUST00000124605	processed_transcript		11	1	50148132	361
ENSMUSG00000029387	protein_coding	Gtf2h3	ENSMUST00000153436	retained_intron		5	1	124583847	725
ENSMUSG00000036644	protein_coding	Tbc1d9b	ENSMUST00000141520	processed_transcript		11	1	50161663	370
ENSMUSG00000083105	processed_pseudogene	Gm12393	ENSMUST00000117084	processed_pseudogene		4	1	19259096	848
ENSMUSG00000100107	unprocessed_pseudogene	Gm28567	ENSMUST00000190270	unprocessed_pseudogene		Y	1	43371322	693
ENSMUSG00000072255	processed_pseudogene	Rpl31-ps17	ENSMUST00000097040	processed_pseudogene		12	-1	54701706	378
ENSMUSG00000029387	protein_coding	Gtf2h3	ENSMUST00000142746	retained_intron		5	1	124590379	1531
ENSMUSG00000107136	TEC	Gm42466	ENSMUST00000202099	TEC		5	-1	67844420	1301
ENSMUSG00000095578	protein_coding	Gm21760	ENSMUST00000187433	protein_coding	principal1	Y	1	80133779	923
ENSMUSG00000029387	protein_coding	Gtf2h3	ENSMUST00000143810	retained_intron		5	1	124594265	620
ENSMUSG00000111904	processed_pseudogene	Gm2395	ENSMUST00000217896	processed_pseudogene		12	1	54716796	424
ENSMUSG00000106615	processed_pseudogene	Gm8968	ENSMUST00000199133	processed_pseudogene		5	-1	13839535	1303
ENSMUSG00000095578	protein_coding	Gm21760	ENSMUST00000179811	protein_coding		Y	1	80135210	498
ENSMUSG00000106859	TEC	Gm42737	ENSMUST00000201074	TEC		5	-1	67759330	1755
ENSMUSG00000112186	processed_pseudogene	Gm2412	ENSMUST00000219097	processed_pseudogene		12	-1	54732141	426
ENSMUSG00000085363	antisense	Gm15478	ENSMUST00000145914	antisense		5	1	67642401	2172
ENSMUSG00000107317	antisense	Gm19719	ENSMUST00000200934	antisense		5	-1	149287868	4230
ENSMUSG00000099734	unprocessed_pseudogene	Gm28159	ENSMUST00000190296	unprocessed_pseudogene		Y	-1	80220768	696
ENSMUSG00000027784	protein_coding	Ppm1l	ENSMUST00000029355	protein_coding	principal1	3	1	69316861	9417
ENSMUSG00000100051	lincRNA	Gm28568	ENSMUST00000187762	lincRNA		Y	-1	43454367	1498
ENSMUSG00000106837	TEC	D630030B08Rik	ENSMUST00000202983	TEC		5	-1	67836828	3479
ENSMUSG00000100051	lincRNA	Gm28568	ENSMUST00000188639	lincRNA		Y	-1	43453914	437
ENSMUSG00000107206	TEC	Gm42736	ENSMUST00000200723	TEC		5	1	67872882	1353
ENSMUSG00000100723	unprocessed_pseudogene	Gm28160	ENSMUST00000191229	unprocessed_pseudogene		Y	-1	80239757	315
ENSMUSG00000027784	protein_coding	Ppm1l	ENSMUST00000193662	retained_intron		3	1	69497213	762
ENSMUSG00000105521	processed_pseudogene	Gm35702	ENSMUST00000198653	processed_pseudogene		5	1	13877166	511
ENSMUSG00000005533	protein_coding	Igf1r	ENSMUST00000005671	protein_coding	principal1	7	1	67952827	11409
ENSMUSG00000029730	protein_coding	Mcm7	ENSMUST00000153867	protein_coding		5	-1	138171266	795
ENSMUSG00000027784	protein_coding	Ppm1l	ENSMUST00000134037	processed_transcript		3	1	69542432	398
ENSMUSG00000027784	protein_coding	Ppm1l	ENSMUST00000128637	retained_intron		3	1	69548979	781
ENSMUSG00000029730	protein_coding	Mcm7	ENSMUST00000139223	retained_intron		5	-1	138169643	629
ENSMUSG00000099977	lincRNA	Gm29286	ENSMUST00000187736	lincRNA		Y	1	43803100	537
ENSMUSG00000099977	lincRNA	Gm29286	ENSMUST00000186707	lincRNA		Y	1	43803100	352
ENSMUSG00000050010	protein_coding	Shisa3	ENSMUST00000087241	protein_coding	principal1	5	1	67607882	3760
ENSMUSG00000105614	processed_pseudogene	Dnd1-ps	ENSMUST00000196992	processed_pseudogene		5	1	13879219	964
ENSMUSG00000002603	protein_coding	Tgfb1	ENSMUST00000002678	protein_coding	principal1	7	1	25687002	2175
ENSMUSG00000005533	protein_coding	Igf1r	ENSMUST00000207621	retained_intron		7	1	68148590	2050
ENSMUSG00000008683	protein_coding	Rps15a	ENSMUST00000131374	protein_coding	principal1	7	-1	118116188	5179
ENSMUSG00000029730	protein_coding	Mcm7	ENSMUST00000139983	protein_coding		5	-1	138171017	829
ENSMUSG00000060063	protein_coding	Alox5ap	ENSMUST00000071130	protein_coding	principal1	5	1	149264767	1251
ENSMUSG00000005533	protein_coding	Igf1r	ENSMUST00000207487	retained_intron		7	1	68186625	1350
ENSMUSG00000005533	protein_coding	Igf1r	ENSMUST00000208348	retained_intron		7	1	68194666	1945
ENSMUSG00000050010	protein_coding	Shisa3	ENSMUST00000142843	nonsense_mediated_decay		5	1	67607969	1710
ENSMUSG00000005533	protein_coding	Igf1r	ENSMUST00000208731	retained_intron		7	1	68210259	2668
ENSMUSG00000002603	protein_coding	Tgfb1	ENSMUST00000206584	processed_transcript		7	1	25688148	241
ENSMUSG00000029730	protein_coding	Mcm7	ENSMUST00000155902	protein_coding		5	-1	138171815	736
ENSMUSG00000020601	protein_coding	Trib2	ENSMUST00000020922	protein_coding	principal1	12	-1	15816785	4198
ENSMUSG00000033068	protein_coding	Entpd6	ENSMUST00000094467	protein_coding	principal1	2	1	150749042	2540
ENSMUSG00000002603	protein_coding	Tgfb1	ENSMUST00000206348	retained_intron		7	1	25688890	2573
ENSMUSG00000107041	TEC	Gm42735	ENSMUST00000201718	TEC		5	-1	67635308	1646
ENSMUSG00000008683	protein_coding	Rps15a	ENSMUST00000106588	protein_coding	principal1	7	-1	118115677	640
ENSMUSG00000029730	protein_coding	Mcm7	ENSMUST00000148094	protein_coding		5	-1	138170661	705
ENSMUSG00000005533	protein_coding	Igf1r	ENSMUST00000208871	retained_intron		7	1	68211838	733
ENSMUSG00000060063	protein_coding	Alox5ap	ENSMUST00000200806	protein_coding		5	1	149265347	452
ENSMUSG00000029730	protein_coding	Mcm7	ENSMUST00000147920	protein_coding		5	-1	138171241	660
ENSMUSG00000037563	protein_coding	Rps16	ENSMUST00000082134	protein_coding	principal1	7	1	28350652	1109
ENSMUSG00000008683	protein_coding	Rps15a	ENSMUST00000106590	protein_coding		7	-1	118115554	637
ENSMUSG00000005362	protein_coding	Crbn	ENSMUST00000013882	protein_coding	alternative1	6	-1	106800065	2072
ENSMUSG00000002603	protein_coding	Tgfb1	ENSMUST00000169009	nonsense_mediated_decay		7	1	25688927	700
ENSMUSG00000020601	protein_coding	Trib2	ENSMUST00000221518	protein_coding		12	-1	15816922	1192
ENSMUSG00000060063	protein_coding	Alox5ap	ENSMUST00000200928	protein_coding		5	1	149279011	356
ENSMUSG00000022205	protein_coding	Sub1	ENSMUST00000022816	protein_coding	principal1	15	-1	11996058	3372
ENSMUSG00000002603	protein_coding	Tgfb1	ENSMUST00000171757	retained_intron		7	1	25692418	495
ENSMUSG00000020601	protein_coding	Trib2	ENSMUST00000221215	protein_coding		12	-1	15816890	390
ENSMUSG00000008683	protein_coding	Rps15a	ENSMUST00000134270	retained_intron		7	-1	118115228	556
ENSMUSG00000060063	protein_coding	Alox5ap	ENSMUST00000202629	processed_transcript		5	1	149287415	504
ENSMUSG00000008683	protein_coding	Rps15a	ENSMUST00000131840	protein_coding		7	-1	118116129	629
ENSMUSG00000025451	protein_coding	Paip1	ENSMUST00000026520	protein_coding	principal3	13	1	119428922	2551
ENSMUSG00000008683	protein_coding	Rps15a	ENSMUST00000128482	protein_coding		7	-1	118116128	250
ENSMUSG00000022205	protein_coding	Sub1	ENSMUST00000110504	protein_coding	principal1	15	-1	11996983	675
ENSMUSG00000099507	processed_pseudogene	Gm18970	ENSMUST00000186040	processed_pseudogene		1	-1	134033378	938
ENSMUSG00000033068	protein_coding	Entpd6	ENSMUST00000147223	retained_intron		2	1	150749081	2893
ENSMUSG00000037563	protein_coding	Rps16	ENSMUST00000152918	retained_intron		7	1	28350763	628
ENSMUSG00000018398	protein_coding	Septin8	ENSMUST00000108987	protein_coding	alternative1	11	1	53519746	4436
ENSMUSG00000023353	protein_coding	Agap3	ENSMUST00000024123	protein_coding	principal1	5	1	24452177	3207
ENSMUSG00000033068	protein_coding	Entpd6	ENSMUST00000146517	processed_transcript		2	1	150749092	1135
ENSMUSG00000023353	protein_coding	Agap3	ENSMUST00000212381	protein_coding		5	1	24452207	1191
ENSMUSG00000018398	protein_coding	Septin8	ENSMUST00000121334	protein_coding	alternative1	11	1	53519770	2801
ENSMUSG00000008683	protein_coding	Rps15a	ENSMUST00000172457	protein_coding	principal1	7	-1	118115256	5130
ENSMUSG00000020601	protein_coding	Trib2	ENSMUST00000151100	processed_transcript		12	-1	15816877	810
ENSMUSG00000025451	protein_coding	Paip1	ENSMUST00000132304	nonsense_mediated_decay		13	1	119429119	1595
ENSMUSG00000033068	protein_coding	Entpd6	ENSMUST00000139723	processed_transcript		2	1	150749171	352
ENSMUSG00000037563	protein_coding	Rps16	ENSMUST00000155805	retained_intron		7	1	28350924	518
ENSMUSG00000022205	protein_coding	Sub1	ENSMUST00000129533	retained_intron		15	-1	11996012	689
ENSMUSG00000101981	lincRNA	Gm28157	ENSMUST00000187675	lincRNA		Y	-1	80244513	2165
ENSMUSG00000042015	protein_coding	Wdr41	ENSMUST00000160115	protein_coding		13	1	94976344	2851
ENSMUSG00000005362	protein_coding	Crbn	ENSMUST00000113239	protein_coding	principal4	6	-1	106800074	2084
ENSMUSG00000025451	protein_coding	Paip1	ENSMUST00000173627	protein_coding		13	1	119429133	1233
ENSMUSG00000022205	protein_coding	Sub1	ENSMUST00000134414	processed_transcript		15	-1	11995750	430
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000074840	protein_coding	principal1	5	-1	30960361	6300
ENSMUSG00000100148	unprocessed_pseudogene	Gm28158	ENSMUST00000188431	unprocessed_pseudogene		Y	-1	80389264	696
ENSMUSG00000023353	protein_coding	Agap3	ENSMUST00000199647	processed_transcript		5	1	24452334	1061
ENSMUSG00000005362	protein_coding	Crbn	ENSMUST00000151484	protein_coding		6	-1	106799033	816
ENSMUSG00000018398	protein_coding	Septin8	ENSMUST00000117061	protein_coding	principal3	11	1	53519800	4563
ENSMUSG00000005362	protein_coding	Crbn	ENSMUST00000147087	retained_intron		6	-1	106800061	2784
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000201002	protein_coding		5	-1	30958741	1146
ENSMUSG00000005362	protein_coding	Crbn	ENSMUST00000204230	retained_intron		6	-1	106800077	2898
ENSMUSG00000100756	unprocessed_pseudogene	Gm21257	ENSMUST00000185655	unprocessed_pseudogene		Y	-1	80463929	696
ENSMUSG00000018398	protein_coding	Septin8	ENSMUST00000120878	protein_coding	alternative1	11	1	53519908	1806
ENSMUSG00000023353	protein_coding	Agap3	ENSMUST00000199856	protein_coding		5	1	24474214	2685
ENSMUSG00000025451	protein_coding	Paip1	ENSMUST00000126957	protein_coding		13	1	119429133	1731
ENSMUSG00000025451	protein_coding	Paip1	ENSMUST00000174691	protein_coding		13	1	119429158	621
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000202567	protein_coding		5	-1	30960280	1869
ENSMUSG00000113222	processed_pseudogene	Gm48557	ENSMUST00000221004	processed_pseudogene		12	-1	15865697	554
ENSMUSG00000025451	protein_coding	Paip1	ENSMUST00000174533	protein_coding		13	1	119440867	568
ENSMUSG00000018398	protein_coding	Septin8	ENSMUST00000147912	protein_coding	alternative1	11	1	53519927	1742
ENSMUSG00000023353	protein_coding	Agap3	ENSMUST00000197513	protein_coding		5	1	24479753	1770
ENSMUSG00000030443	protein_coding	Zfp583	ENSMUST00000062765	protein_coding	principal1	7	-1	6331285	2550
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000202590	processed_transcript		5	-1	30958087	731
ENSMUSG00000097580	bidirectional_promoter_lncRNA	Gm5432	ENSMUST00000180759	bidirectional_promoter_lncRNA		12	1	15817003	1670
ENSMUSG00000025451	protein_coding	Paip1	ENSMUST00000173339	retained_intron		13	1	119449430	838
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000134063	protein_coding	alternative2	19	1	40612397	2409
ENSMUSG00000023353	protein_coding	Agap3	ENSMUST00000199250	processed_transcript		5	1	24480172	1094
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000202472	retained_intron		5	-1	30956183	499
ENSMUSG00000018398	protein_coding	Septin8	ENSMUST00000145927	processed_transcript		11	1	53532051	737
ENSMUSG00000113629	lincRNA	Gm48558	ENSMUST00000221592	lincRNA		12	-1	15850625	983
ENSMUSG00000049960	protein_coding	Mrps16	ENSMUST00000061444	protein_coding	principal1	14	-1	20393634	2572
ENSMUSG00000030443	protein_coding	Zfp583	ENSMUST00000108560	protein_coding	principal1	7	-1	6330434	2154
ENSMUSG00000093892	processed_pseudogene	Gm3261	ENSMUST00000166886	processed_pseudogene		14	1	6008825	481
ENSMUSG00000110133	processed_pseudogene	Gm8168	ENSMUST00000209631	processed_pseudogene		8	-1	31280814	948
ENSMUSG00000042015	protein_coding	Wdr41	ENSMUST00000160801	protein_coding	principal1	13	1	94976348	3062
ENSMUSG00000099805	unprocessed_pseudogene	Gm28161	ENSMUST00000186669	unprocessed_pseudogene		Y	-1	80493640	614
ENSMUSG00000081370	processed_pseudogene	Gm9105	ENSMUST00000120160	processed_pseudogene		7	-1	109388875	1398
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000202904	retained_intron		5	-1	30958664	724
ENSMUSG00000032948	protein_coding	Lipi	ENSMUST00000062721	protein_coding	principal1	16	-1	75586061	2082
ENSMUSG00000109915	lincRNA	7420700N18Rik	ENSMUST00000209524	lincRNA		8	1	31378813	1644
ENSMUSG00000030443	protein_coding	Zfp583	ENSMUST00000123868	processed_transcript		7	-1	6331250	410
ENSMUSG00000109705	processed_pseudogene	Gm19096	ENSMUST00000209705	processed_pseudogene		8	-1	31381316	766
ENSMUSG00000085407	antisense	1700095J03Rik	ENSMUST00000143715	antisense		7	1	109438618	1808
ENSMUSG00000058200	protein_coding	Olfr66	ENSMUST00000216303	protein_coding	principal1	7	-1	103886252	3080
ENSMUSG00000118533	processed_pseudogene	AC132410.1	ENSMUST00000238992	processed_pseudogene		8	1	31398031	387
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000200756	retained_intron		5	-1	30958662	574
ENSMUSG00000058200	protein_coding	Olfr66	ENSMUST00000079117	protein_coding	principal1	7	-1	103882241	936
ENSMUSG00000049960	protein_coding	Mrps16	ENSMUST00000224286	processed_transcript		14	-1	20393483	801
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000202930	retained_intron		5	-1	30959226	653
ENSMUSG00000030443	protein_coding	Zfp583	ENSMUST00000135435	processed_transcript		7	-1	6331204	577
ENSMUSG00000109605	lincRNA	Gm45303	ENSMUST00000211239	lincRNA		8	1	31491976	676
ENSMUSG00000063605	protein_coding	Ccdc102a	ENSMUST00000077955	protein_coding	principal1	8	-1	94918098	2304
ENSMUSG00000083854	processed_pseudogene	Dnajc19-ps	ENSMUST00000120890	processed_pseudogene		7	-1	103883004	351
ENSMUSG00000030443	protein_coding	Zfp583	ENSMUST00000127658	protein_coding		7	-1	6331278	408
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000200836	processed_transcript		5	-1	30960270	773
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000112231	protein_coding	principal3	19	1	40659770	4221
ENSMUSG00000032948	protein_coding	Lipi	ENSMUST00000186809	processed_transcript		16	-1	75567682	1462
ENSMUSG00000030443	protein_coding	Zfp583	ENSMUST00000165705	protein_coding	principal1	7	-1	6329263	1707
ENSMUSG00000098190	processed_pseudogene	Gm5210	ENSMUST00000182150	processed_pseudogene		15	-1	8929171	1010
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000201730	processed_transcript		5	-1	30959555	584
ENSMUSG00000099415	lincRNA	Gm29285	ENSMUST00000185500	lincRNA		Y	1	43842631	174
ENSMUSG00000110329	lincRNA	Gm45304	ENSMUST00000210303	lincRNA		8	-1	31663824	2828
ENSMUSG00000063605	protein_coding	Ccdc102a	ENSMUST00000162020	protein_coding		8	-1	94917521	444
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000202445	retained_intron		5	-1	30960252	756
ENSMUSG00000042015	protein_coding	Wdr41	ENSMUST00000160409	processed_transcript		13	1	94976438	2339
ENSMUSG00000110329	lincRNA	Gm45304	ENSMUST00000211064	lincRNA		8	-1	31663828	427
ENSMUSG00000045302	protein_coding	Preb	ENSMUST00000202593	processed_transcript		5	-1	30960262	419
ENSMUSG00000110329	lincRNA	Gm45304	ENSMUST00000210672	lincRNA		8	-1	31663826	654
ENSMUSG00000042015	protein_coding	Wdr41	ENSMUST00000159647	protein_coding		13	1	94976438	2289
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000127828	protein_coding		19	1	40659799	473
ENSMUSG00000100953	lincRNA	Gm28280	ENSMUST00000188196	lincRNA		Y	1	43865261	622
ENSMUSG00000100953	lincRNA	Gm28280	ENSMUST00000190649	lincRNA		Y	1	43865261	437
ENSMUSG00000042015	protein_coding	Wdr41	ENSMUST00000222948	processed_transcript		13	1	94997056	644
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000156598	nonsense_mediated_decay		19	1	40659844	1506
ENSMUSG00000004285	protein_coding	Atp6v1f	ENSMUST00000004396	protein_coding	principal1	6	1	29467718	703
ENSMUSG00000042015	protein_coding	Wdr41	ENSMUST00000223422	processed_transcript		13	1	95017584	756
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000155988	processed_transcript		19	1	40660199	204
ENSMUSG00000004285	protein_coding	Atp6v1f	ENSMUST00000143101	protein_coding		6	1	29468068	546
ENSMUSG00000096332	unprocessed_pseudogene	Gm21241	ENSMUST00000179551	unprocessed_pseudogene		Y	1	43952162	934
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000144080	processed_transcript		19	1	40660493	628
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000137508	processed_transcript		19	1	40681667	387
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000127268	protein_coding		19	1	40726050	881
ENSMUSG00000004285	protein_coding	Atp6v1f	ENSMUST00000149646	protein_coding		6	1	29468068	806
ENSMUSG00000101070	unprocessed_pseudogene	Gm28695	ENSMUST00000190300	unprocessed_pseudogene		Y	-1	80530519	697
ENSMUSG00000048120	protein_coding	Entpd1	ENSMUST00000151726	processed_transcript		19	1	40736184	245
ENSMUSG00000094388	processed_pseudogene	Gm8783	ENSMUST00000159764	processed_pseudogene		19	1	40622460	522
ENSMUSG00000117952	sense_intronic	Gm50132	ENSMUST00000235613	sense_intronic		19	1	40644146	274
ENSMUSG00000100286	lincRNA	Gm28696	ENSMUST00000189187	lincRNA		Y	-1	80539754	2169
ENSMUSG00000024477	protein_coding	Pggt1b	ENSMUST00000236216	protein_coding	principal1	18	-1	46280993	7477
ENSMUSG00000113739	lincRNA	Gm48584	ENSMUST00000221010	lincRNA		12	-1	15980488	361
ENSMUSG00000034303	protein_coding	Ccdc15	ENSMUST00000239439	protein_coding	alternative2	9	-1	37348392	3525
ENSMUSG00000034303	protein_coding	Ccdc15	ENSMUST00000213633	protein_coding	alternative2	9	-1	37348432	3331
ENSMUSG00000024477	protein_coding	Pggt1b	ENSMUST00000025354	nonsense_mediated_decay		18	-1	46280830	1941
ENSMUSG00000042015	protein_coding	Wdr41	ENSMUST00000056512	protein_coding	principal1	13	1	94976348	3063
ENSMUSG00000006638	polymorphic_pseudogene	Abhd1	ENSMUST00000201125	polymorphic_pseudogene		5	1	30950066	1352
ENSMUSG00000102984	processed_pseudogene	Gm34727	ENSMUST00000195175	processed_pseudogene		1	1	38487519	529
ENSMUSG00000024477	protein_coding	Pggt1b	ENSMUST00000236368	protein_coding		18	-1	46248905	547
ENSMUSG00000024477	protein_coding	Pggt1b	ENSMUST00000235465	nonsense_mediated_decay		18	-1	46280827	1278
ENSMUSG00000024477	protein_coding	Pggt1b	ENSMUST00000236999	protein_coding		18	-1	46280819	903
ENSMUSG00000047492	protein_coding	Inhbe	ENSMUST00000059718	protein_coding	principal1	10	-1	127354411	5319
ENSMUSG00000085391	antisense	Gm16150	ENSMUST00000127620	antisense		1	1	38235420	437
ENSMUSG00000019864	protein_coding	Rtn4ip1	ENSMUST00000054418	protein_coding	principal1	10	1	43901807	2981
ENSMUSG00000024477	protein_coding	Pggt1b	ENSMUST00000236527	retained_intron		18	-1	46259699	524
ENSMUSG00000042015	protein_coding	Wdr41	ENSMUST00000222995	protein_coding		13	1	94976348	1112
ENSMUSG00000042015	protein_coding	Wdr41	ENSMUST00000167155	protein_coding		13	1	94976438	2289
ENSMUSG00000024477	protein_coding	Pggt1b	ENSMUST00000237757	retained_intron		18	-1	46280827	1845
ENSMUSG00000021218	protein_coding	Gdi2	ENSMUST00000223396	protein_coding	principal1	13	1	3538063	4303
ENSMUSG00000034303	protein_coding	Ccdc15	ENSMUST00000216060	retained_intron		9	-1	37348357	3180
ENSMUSG00000024477	protein_coding	Pggt1b	ENSMUST00000235979	retained_intron		18	-1	46275929	2439
ENSMUSG00000113198	processed_pseudogene	Gm6988	ENSMUST00000222676	processed_pseudogene		12	1	110315990	375
ENSMUSG00000078627	protein_coding	Marchf10	ENSMUST00000100332	protein_coding		11	-1	105456735	1289
ENSMUSG00000006638	polymorphic_pseudogene	Abhd1	ENSMUST00000006814	protein_coding	principal1	5	1	30950106	1309
ENSMUSG00000085391	antisense	Gm16150	ENSMUST00000133299	antisense		1	1	38239700	673
ENSMUSG00000019864	protein_coding	Rtn4ip1	ENSMUST00000105492	protein_coding		10	1	43921035	2059
ENSMUSG00000113512	processed_pseudogene	Gm9063	ENSMUST00000223299	processed_pseudogene		12	-1	110320173	582
ENSMUSG00000108843	processed_pseudogene	Gm4501	ENSMUST00000207330	processed_pseudogene		7	1	20289784	551
ENSMUSG00000034303	protein_coding	Ccdc15	ENSMUST00000215116	nonsense_mediated_decay		9	-1	37348381	969
ENSMUSG00000024477	protein_coding	Pggt1b	ENSMUST00000236205	retained_intron		18	-1	46280946	1039
ENSMUSG00000085280	antisense	Gm16151	ENSMUST00000129696	antisense		1	1	38307902	639
ENSMUSG00000019864	protein_coding	Rtn4ip1	ENSMUST00000214220	processed_transcript		10	1	43946617	663
ENSMUSG00000019864	protein_coding	Rtn4ip1	ENSMUST00000214453	processed_transcript		10	1	43947896	821
ENSMUSG00000034303	protein_coding	Ccdc15	ENSMUST00000216042	protein_coding	alternative2	9	-1	37348388	1669
ENSMUSG00000021218	protein_coding	Gdi2	ENSMUST00000221575	processed_transcript		13	1	3538083	390
ENSMUSG00000095745	protein_coding	Vmn1r243	ENSMUST00000172989	protein_coding	principal1	7	-1	20334065	924
ENSMUSG00000021218	protein_coding	Gdi2	ENSMUST00000221875	processed_transcript		13	1	3538128	2009
ENSMUSG00000034303	protein_coding	Ccdc15	ENSMUST00000217238	protein_coding	alternative2	9	-1	37348357	1747
ENSMUSG00000094160	unprocessed_pseudogene	Vmn1r-ps79	ENSMUST00000173508	unprocessed_pseudogene		7	-1	20357760	963
ENSMUSG00000021218	protein_coding	Gdi2	ENSMUST00000222926	retained_intron		13	1	3538130	4951
ENSMUSG00000021218	protein_coding	Gdi2	ENSMUST00000059515	protein_coding		13	1	3538130	2077
ENSMUSG00000021218	protein_coding	Gdi2	ENSMUST00000221348	processed_transcript		13	1	3538134	443
ENSMUSG00000068735	protein_coding	Trp53i11	ENSMUST00000111266	protein_coding	principal1	2	1	93187548	2703
ENSMUSG00000048310	protein_coding	Pskh1	ENSMUST00000049699	protein_coding	principal1	8	1	105900441	3255
ENSMUSG00000034303	protein_coding	Ccdc15	ENSMUST00000037275	protein_coding	principal2	9	-1	37348392	3525
ENSMUSG00000021218	protein_coding	Gdi2	ENSMUST00000222365	protein_coding		13	1	3538148	1107
ENSMUSG00000021218	protein_coding	Gdi2	ENSMUST00000222906	processed_transcript		13	1	3538445	397
ENSMUSG00000114183	processed_pseudogene	Gm47195	ENSMUST00000222991	processed_pseudogene		12	1	110325385	337
ENSMUSG00000021218	protein_coding	Gdi2	ENSMUST00000223501	retained_intron		13	1	3554039	826
ENSMUSG00000021638	protein_coding	Ocln	ENSMUST00000069756	protein_coding	principal1	13	-1	100552498	4052
ENSMUSG00000021218	protein_coding	Gdi2	ENSMUST00000221581	protein_coding		13	1	3561942	600
ENSMUSG00000056494	protein_coding	Cngb3	ENSMUST00000102999	protein_coding	principal1	4	1	19280850	4708
ENSMUSG00000105376	lincRNA	Gm36535	ENSMUST00000198395	lincRNA		5	1	111791555	511
ENSMUSG00000113894	TEC	Gm48838	ENSMUST00000223046	TEC		13	1	3562385	1234
ENSMUSG00000105376	lincRNA	Gm36535	ENSMUST00000200641	lincRNA		5	1	111793387	473
ENSMUSG00000082320	processed_pseudogene	Gm11877	ENSMUST00000118921	processed_pseudogene		4	1	19298333	852
ENSMUSG00000078627	protein_coding	Marchf10	ENSMUST00000138977	protein_coding	principal1	11	-1	105455294	2979
ENSMUSG00000024682	protein_coding	Cblif	ENSMUST00000025585	protein_coding	principal1	19	1	11747554	1537
ENSMUSG00000021638	protein_coding	Ocln	ENSMUST00000022140	protein_coding	principal1	13	-1	100552718	2839
ENSMUSG00000106060	lincRNA	Gm42488	ENSMUST00000197648	lincRNA		5	-1	111944235	3225
ENSMUSG00000100693	lincRNA	Gm28278	ENSMUST00000185603	lincRNA		Y	-1	44157841	1499
ENSMUSG00000078627	protein_coding	Marchf10	ENSMUST00000151305	protein_coding		11	-1	105408707	577
ENSMUSG00000100693	lincRNA	Gm28278	ENSMUST00000188061	lincRNA		Y	-1	44157388	437
ENSMUSG00000078627	protein_coding	Marchf10	ENSMUST00000130685	processed_transcript		11	-1	105371900	507
ENSMUSG00000078627	protein_coding	Marchf10	ENSMUST00000049995	protein_coding	principal1	11	-1	105456735	3074
ENSMUSG00000090387	antisense	Gm17056	ENSMUST00000164804	antisense		12	1	40198656	2299
ENSMUSG00000021638	protein_coding	Ocln	ENSMUST00000159459	protein_coding		13	-1	100552623	1950
ENSMUSG00000086089	antisense	Gm11640	ENSMUST00000155987	antisense		11	1	105434445	272
ENSMUSG00000062545	protein_coding	Tlr12	ENSMUST00000074829	protein_coding	principal1	4	-1	128618619	3177
ENSMUSG00000021638	protein_coding	Ocln	ENSMUST00000160859	protein_coding	principal1	13	-1	100552481	2443
ENSMUSG00000019518	protein_coding	Ap4m1	ENSMUST00000019662	protein_coding	principal1	5	1	138172002	3479
ENSMUSG00000109398	protein_coding	Gm3854	ENSMUST00000207173	protein_coding	principal1	7	1	6343759	2950
ENSMUSG00000086487	processed_transcript	Gm11638	ENSMUST00000153672	processed_transcript		11	1	105363252	1615
ENSMUSG00000021638	protein_coding	Ocln	ENSMUST00000159515	protein_coding		13	-1	100552460	390
ENSMUSG00000062545	protein_coding	Tlr12	ENSMUST00000133382	processed_transcript		4	-1	128618592	420
ENSMUSG00000109398	protein_coding	Gm3854	ENSMUST00000208865	retained_intron		7	1	6343769	1140
ENSMUSG00000104538	lincRNA	1700016B01Rik	ENSMUST00000197688	lincRNA		5	1	112156237	270
ENSMUSG00000019518	protein_coding	Ap4m1	ENSMUST00000151318	protein_coding		5	1	138172005	647
ENSMUSG00000071342	protein_coding	Lsmem1	ENSMUST00000220951	protein_coding		12	-1	40199490	2152
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000061158	protein_coding	principal1	2	1	18672423	935
ENSMUSG00000084891	lincRNA	Gm12958	ENSMUST00000141242	lincRNA		4	1	128637471	674
ENSMUSG00000013736	protein_coding	Trnt1	ENSMUST00000113247	protein_coding		6	1	106769120	1934
ENSMUSG00000109080	lincRNA	Gm38944	ENSMUST00000208218	lincRNA		7	-1	6344005	512
ENSMUSG00000099638	lincRNA	Gm28279	ENSMUST00000186248	lincRNA		Y	-1	44171356	1493
ENSMUSG00000019518	protein_coding	Ap4m1	ENSMUST00000157031	retained_intron		5	1	138172047	2148
ENSMUSG00000062937	protein_coding	Mtap	ENSMUST00000058030	protein_coding	principal1	4	1	89137122	2797
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000151974	processed_transcript		2	1	18672433	399
ENSMUSG00000099638	lincRNA	Gm28279	ENSMUST00000188233	lincRNA		Y	-1	44170903	431
ENSMUSG00000071342	protein_coding	Lsmem1	ENSMUST00000095760	protein_coding	principal1	12	-1	40199315	1213
ENSMUSG00000062937	protein_coding	Mtap	ENSMUST00000204571	processed_transcript		4	1	89176374	559
ENSMUSG00000083989	processed_pseudogene	Gm12607	ENSMUST00000120724	processed_pseudogene		4	-1	89162191	493
ENSMUSG00000068735	protein_coding	Trp53i11	ENSMUST00000140172	processed_transcript		2	1	93187561	1752
ENSMUSG00000047388	protein_coding	Atmin	ENSMUST00000109099	protein_coding	principal1	8	1	116943393	4877
ENSMUSG00000029843	protein_coding	Slc13a4	ENSMUST00000031868	protein_coding	principal1	6	-1	35308131	3427
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000133828	processed_transcript		2	1	18672435	792
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000117796	protein_coding	alternative2	7	1	24902912	3508
ENSMUSG00000068735	protein_coding	Trp53i11	ENSMUST00000150462	protein_coding		2	1	93187548	690
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000154519	processed_transcript		2	1	18672436	786
ENSMUSG00000041559	protein_coding	Fmod	ENSMUST00000048183	protein_coding	principal1	1	1	134037254	3120
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000137317	processed_transcript		2	1	18672523	377
ENSMUSG00000068735	protein_coding	Trp53i11	ENSMUST00000127173	processed_transcript		2	1	93189191	2899
ENSMUSG00000029843	protein_coding	Slc13a4	ENSMUST00000155366	retained_intron		6	-1	35288174	774
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000131369	processed_transcript		2	1	18673658	622
ENSMUSG00000025407	protein_coding	Gli1	ENSMUST00000026474	protein_coding	principal1	10	-1	127341974	4057
ENSMUSG00000068735	protein_coding	Trp53i11	ENSMUST00000147377	processed_transcript		2	1	93187561	990
ENSMUSG00000041559	protein_coding	Fmod	ENSMUST00000162779	protein_coding		1	1	134037496	532
ENSMUSG00000029843	protein_coding	Slc13a4	ENSMUST00000122829	retained_intron		6	-1	35308129	2101
ENSMUSG00000068735	protein_coding	Trp53i11	ENSMUST00000132182	processed_transcript		2	1	93187670	552
ENSMUSG00000068735	protein_coding	Trp53i11	ENSMUST00000143164	processed_transcript		2	1	93198919	952
ENSMUSG00000095806	protein_coding	Vmn1r244	ENSMUST00000105209	protein_coding	principal1	7	-1	20375410	918
ENSMUSG00000019518	protein_coding	Ap4m1	ENSMUST00000143241	nonsense_mediated_decay		5	1	138172068	1568
ENSMUSG00000025407	protein_coding	Gli1	ENSMUST00000219808	retained_intron		10	-1	127337055	795
ENSMUSG00000019518	protein_coding	Ap4m1	ENSMUST00000155745	retained_intron		5	1	138172582	520
ENSMUSG00000037138	protein_coding	Aff3	ENSMUST00000095027	protein_coding	principal2	1	-1	38627185	5857
ENSMUSG00000019866	protein_coding	Crybg1	ENSMUST00000200401	protein_coding	alternative2	10	-1	44148853	7525
ENSMUSG00000068735	protein_coding	Trp53i11	ENSMUST00000090554	protein_coding	principal1	2	1	93187584	2654
ENSMUSG00000096386	protein_coding	Vmn1r100	ENSMUST00000177815	protein_coding	principal1	7	1	20417942	924
ENSMUSG00000019518	protein_coding	Ap4m1	ENSMUST00000142687	retained_intron		5	1	138174786	678
ENSMUSG00000030835	protein_coding	Nomo1	ENSMUST00000033121	protein_coding	principal1	7	1	46033698	4257
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000133685	processed_transcript		2	1	18673961	431
ENSMUSG00000020423	protein_coding	Btg2	ENSMUST00000020692	protein_coding	principal1	1	-1	134079120	2743
ENSMUSG00000037138	protein_coding	Aff3	ENSMUST00000238906	protein_coding	alternative2	1	-1	38627201	5948
ENSMUSG00000019866	protein_coding	Crybg1	ENSMUST00000020017	protein_coding	principal2	10	-1	44004369	6608
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000137817	processed_transcript		2	1	18674085	524
ENSMUSG00000025407	protein_coding	Gli1	ENSMUST00000218236	protein_coding		10	-1	127339959	467
ENSMUSG00000025407	protein_coding	Gli1	ENSMUST00000219671	protein_coding		10	-1	127341974	954
ENSMUSG00000030835	protein_coding	Nomo1	ENSMUST00000182564	retained_intron		7	1	46050121	740
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000130537	processed_transcript		2	1	18674347	544
ENSMUSG00000094545	protein_coding	Vmn1r101	ENSMUST00000164245	protein_coding	principal1	7	-1	20442593	924
ENSMUSG00000019866	protein_coding	Crybg1	ENSMUST00000239010	protein_coding		10	-1	44058778	990
ENSMUSG00000019518	protein_coding	Ap4m1	ENSMUST00000134100	retained_intron		5	1	138176569	959
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000150590	processed_transcript		2	1	18674424	499
ENSMUSG00000025407	protein_coding	Gli1	ENSMUST00000218451	retained_intron		10	-1	127341886	1252
ENSMUSG00000030835	protein_coding	Nomo1	ENSMUST00000182842	retained_intron		7	1	46054160	766
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000151230	processed_transcript		2	1	18674649	677
ENSMUSG00000103651	TEC	Gm37206	ENSMUST00000195512	TEC		19	-1	4765171	3069
ENSMUSG00000112426	antisense	Gm47200	ENSMUST00000219640	antisense		10	1	127332391	622
ENSMUSG00000094762	protein_coding	Gm10670	ENSMUST00000098744	protein_coding	principal1	7	-1	20474925	966
ENSMUSG00000030835	protein_coding	Nomo1	ENSMUST00000182531	retained_intron		7	1	46058456	449
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000047873	protein_coding	alternative2	7	1	24903037	3212
ENSMUSG00000051154	protein_coding	Commd3	ENSMUST00000171845	protein_coding	principal1	2	1	18672384	938
ENSMUSG00000031896	protein_coding	Ctrl	ENSMUST00000034368	protein_coding	principal1	8	-1	105933862	879
ENSMUSG00000114830	antisense	Gm47400	ENSMUST00000224644	antisense		13	1	38634971	2146
ENSMUSG00000030835	protein_coding	Nomo1	ENSMUST00000182305	retained_intron		7	1	46082645	885
ENSMUSG00000113930	lincRNA	Gm36235	ENSMUST00000223158	lincRNA		12	-1	16015545	1694
ENSMUSG00000025405	protein_coding	Inhbc	ENSMUST00000026472	protein_coding	principal1	10	-1	127370431	1859
ENSMUSG00000031896	protein_coding	Ctrl	ENSMUST00000212561	retained_intron		8	-1	105933455	657
ENSMUSG00000013736	protein_coding	Trnt1	ENSMUST00000113249	protein_coding	principal1	6	1	106769141	1614
ENSMUSG00000031027	protein_coding	Stk33	ENSMUST00000121748	protein_coding	principal1	7	-1	109438817	2295
ENSMUSG00000108269	transcribed_processed_pseudogene	Gm18422	ENSMUST00000203663	transcribed_processed_pseudogene		6	1	100247229	1032
ENSMUSG00000108269	transcribed_processed_pseudogene	Gm18422	ENSMUST00000203798	processed_transcript		6	1	100248132	2214
ENSMUSG00000038286	protein_coding	Bphl	ENSMUST00000040656	protein_coding	principal1	13	1	34037597	1253
ENSMUSG00000031027	protein_coding	Stk33	ENSMUST00000106745	protein_coding	principal1	7	-1	109439076	2410
ENSMUSG00000013736	protein_coding	Trnt1	ENSMUST00000113248	protein_coding	principal1	6	1	106769166	1398
ENSMUSG00000107461	TEC	Gm44045	ENSMUST00000204906	TEC		6	-1	100259227	2520
ENSMUSG00000101683	lincRNA	1700028D13Rik	ENSMUST00000186834	lincRNA		5	1	112206763	558
ENSMUSG00000047420	protein_coding	Fam180a	ENSMUST00000051176	protein_coding	principal1	6	-1	35326141	1606
ENSMUSG00000101683	lincRNA	1700028D13Rik	ENSMUST00000187272	lincRNA		5	1	112206806	675
ENSMUSG00000061665	protein_coding	Cd2ap	ENSMUST00000024709	protein_coding	principal1	17	-1	42876389	5364
ENSMUSG00000046262	protein_coding	C87977	ENSMUST00000105754	protein_coding	alternative2	4	-1	144213039	1407
ENSMUSG00000038286	protein_coding	Bphl	ENSMUST00000222658	nonsense_mediated_decay		13	1	34037632	761
ENSMUSG00000013736	protein_coding	Trnt1	ENSMUST00000057578	protein_coding	principal1	6	1	106769166	2283
ENSMUSG00000031027	protein_coding	Stk33	ENSMUST00000090414	protein_coding	principal1	7	-1	109439081	2221
ENSMUSG00000037138	protein_coding	Aff3	ENSMUST00000136641	processed_transcript		1	-1	38197443	761
ENSMUSG00000029173	protein_coding	Sepsecs	ENSMUST00000031069	protein_coding	principal1	5	-1	52669708	5252
ENSMUSG00000038286	protein_coding	Bphl	ENSMUST00000221124	retained_intron		13	1	34037639	2009
ENSMUSG00000061665	protein_coding	Cd2ap	ENSMUST00000233350	retained_intron		17	-1	42799888	4712
ENSMUSG00000031027	protein_coding	Stk33	ENSMUST00000141210	protein_coding		7	-1	109439081	949
ENSMUSG00000046262	protein_coding	C87977	ENSMUST00000105753	protein_coding	alternative2	4	-1	144213017	2446
ENSMUSG00000038286	protein_coding	Bphl	ENSMUST00000222691	nonsense_mediated_decay		13	1	34037657	291
ENSMUSG00000013736	protein_coding	Trnt1	ENSMUST00000147084	retained_intron		6	1	106769170	357
ENSMUSG00000061665	protein_coding	Cd2ap	ENSMUST00000233476	protein_coding		17	-1	42876424	3157
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000098683	protein_coding	principal4	7	1	24903051	3375
ENSMUSG00000061665	protein_coding	Cd2ap	ENSMUST00000233123	retained_intron		17	-1	42810592	3798
ENSMUSG00000038286	protein_coding	Bphl	ENSMUST00000220717	processed_transcript		13	1	34049205	487
ENSMUSG00000013736	protein_coding	Trnt1	ENSMUST00000154026	processed_transcript		6	1	106769213	369
ENSMUSG00000031027	protein_coding	Stk33	ENSMUST00000121378	protein_coding		7	-1	109438998	1304
ENSMUSG00000037138	protein_coding	Aff3	ENSMUST00000027250	processed_transcript		1	-1	38664955	1646
ENSMUSG00000038286	protein_coding	Bphl	ENSMUST00000223251	processed_transcript		13	1	34060526	436
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000206508	protein_coding	alternative2	7	1	24903056	3195
ENSMUSG00000013736	protein_coding	Trnt1	ENSMUST00000205163	protein_coding		6	1	106769286	785
ENSMUSG00000013736	protein_coding	Trnt1	ENSMUST00000204782	protein_coding		6	1	106769507	476
ENSMUSG00000037138	protein_coding	Aff3	ENSMUST00000134963	nonsense_mediated_decay		1	-1	38664955	665
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000129383	processed_transcript		7	1	24903065	351
ENSMUSG00000072872	protein_coding	Rybp	ENSMUST00000101118	protein_coding	principal1	6	-1	100287485	4503
ENSMUSG00000061665	protein_coding	Cd2ap	ENSMUST00000233195	retained_intron		17	-1	42876665	1621
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000206028	protein_coding		7	1	24903071	374
ENSMUSG00000061665	protein_coding	Cd2ap	ENSMUST00000233626	retained_intron		17	-1	42831030	5610
ENSMUSG00000037138	protein_coding	Aff3	ENSMUST00000039827	protein_coding	alternative2	1	-1	38664955	6010
ENSMUSG00000072872	protein_coding	Rybp	ENSMUST00000203410	retained_intron		6	-1	100233131	680
ENSMUSG00000072872	protein_coding	Rybp	ENSMUST00000205164	retained_intron		6	-1	100286748	412
ENSMUSG00000024429	protein_coding	Gnl1	ENSMUST00000087200	protein_coding	principal1	17	1	35979851	2848
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000127761	retained_intron		7	1	24903075	1827
ENSMUSG00000046262	protein_coding	C87977	ENSMUST00000105757	protein_coding	principal2	4	-1	144213090	1885
ENSMUSG00000107690	TEC	Gm44044	ENSMUST00000205178	TEC		6	-1	100273698	1089
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000111231	protein_coding	principal2	2	-1	101628990	2273
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000206906	protein_coding		7	1	24904356	737
ENSMUSG00000029173	protein_coding	Sepsecs	ENSMUST00000150709	nonsense_mediated_decay		5	-1	52669708	5185
ENSMUSG00000028357	protein_coding	Kif12	ENSMUST00000156618	protein_coding	alternative2	4	-1	63172129	2258
ENSMUSG00000029173	protein_coding	Sepsecs	ENSMUST00000126574	nonsense_mediated_decay		5	-1	52666000	3665
ENSMUSG00000024429	protein_coding	Gnl1	ENSMUST00000174275	retained_intron		17	1	35980388	477
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000136601	protein_coding		2	-1	101610556	885
ENSMUSG00000046262	protein_coding	C87977	ENSMUST00000105755	protein_coding	alternative2	4	-1	144213318	1802
ENSMUSG00000029173	protein_coding	Sepsecs	ENSMUST00000199425	retained_intron		5	-1	52648480	1841
ENSMUSG00000073735	protein_coding	Defb18	ENSMUST00000097818	protein_coding	principal1	1	-1	18237443	258
ENSMUSG00000087131	antisense	Gm16152	ENSMUST00000143261	antisense		1	1	38384949	1189
ENSMUSG00000046262	protein_coding	C87977	ENSMUST00000132946	processed_transcript		4	-1	144213015	649
ENSMUSG00000029173	protein_coding	Sepsecs	ENSMUST00000123856	nonsense_mediated_decay		5	-1	52669615	751
ENSMUSG00000034683	protein_coding	Ppp1r1c	ENSMUST00000090760	protein_coding	principal1	2	1	79707780	2644
ENSMUSG00000087131	antisense	Gm16152	ENSMUST00000131663	antisense		1	1	38388829	872
ENSMUSG00000086097	processed_pseudogene	Gm16250	ENSMUST00000148974	processed_pseudogene		13	-1	54840904	256
ENSMUSG00000046262	protein_coding	C87977	ENSMUST00000147855	protein_coding		4	-1	144212969	617
ENSMUSG00000114809	processed_pseudogene	Atp5c1-ps	ENSMUST00000223639	processed_pseudogene		13	-1	77670475	908
ENSMUSG00000034683	protein_coding	Ppp1r1c	ENSMUST00000040863	protein_coding		2	1	79707922	629
ENSMUSG00000028357	protein_coding	Kif12	ENSMUST00000131760	retained_intron		4	-1	63172046	3310
ENSMUSG00000024683	protein_coding	Mrpl16	ENSMUST00000167199	protein_coding	principal1	19	1	11770391	1162
ENSMUSG00000034683	protein_coding	Ppp1r1c	ENSMUST00000111780	protein_coding		2	1	79707923	708
ENSMUSG00000001911	protein_coding	Nfix	ENSMUST00000148644	processed_transcript		8	-1	84708218	398
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000090513	protein_coding	principal2	2	-1	101621046	969
ENSMUSG00000107637	lincRNA	1700069P05Rik	ENSMUST00000204240	lincRNA		6	-1	118248452	785
ENSMUSG00000001911	protein_coding	Nfix	ENSMUST00000148746	processed_transcript		8	-1	84707716	234
ENSMUSG00000046262	protein_coding	C87977	ENSMUST00000146836	protein_coding		4	-1	144213043	697
ENSMUSG00000024683	protein_coding	Mrpl16	ENSMUST00000237728	retained_intron		19	1	11770412	2981
ENSMUSG00000107791	lincRNA	Gm30557	ENSMUST00000203764	lincRNA		6	1	118261686	349
ENSMUSG00000108929	protein_coding	Cc2d2b	ENSMUST00000224596	protein_coding	principal1	19	1	40748753	4762
ENSMUSG00000108929	protein_coding	Cc2d2b	ENSMUST00000207801	protein_coding		19	1	40748753	3730
ENSMUSG00000059022	protein_coding	Kcp	ENSMUST00000159482	protein_coding		6	-1	29484094	2742
ENSMUSG00000038982	protein_coding	Bloc1s5	ENSMUST00000224115	protein_coding		13	-1	38635092	1020
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000160722	protein_coding	principal2	2	-1	101649532	931
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000160037	protein_coding	principal2	2	-1	101649532	1139
ENSMUSG00000038500	protein_coding	Prr3	ENSMUST00000172429	protein_coding		17	-1	35978971	1878
ENSMUSG00000034683	protein_coding	Ppp1r1c	ENSMUST00000141978	processed_transcript		2	1	79708062	3467
ENSMUSG00000107933	lincRNA	Gm30498	ENSMUST00000204033	lincRNA		6	-1	118308384	615
ENSMUSG00000028357	protein_coding	Kif12	ENSMUST00000030042	protein_coding	principal2	4	-1	63172131	2250
ENSMUSG00000034683	protein_coding	Ppp1r1c	ENSMUST00000144432	processed_transcript		2	1	79786591	1051
ENSMUSG00000108929	protein_coding	Cc2d2b	ENSMUST00000207165	processed_transcript		19	1	40758278	818
ENSMUSG00000108929	protein_coding	Cc2d2b	ENSMUST00000207863	protein_coding		19	1	40774370	361
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000177152	protein_coding		2	-1	101576125	296
ENSMUSG00000107709	antisense	9430018G01Rik	ENSMUST00000203260	antisense		6	1	43467979	3758
ENSMUSG00000084325	processed_pseudogene	Gm15550	ENSMUST00000120824	processed_pseudogene		6	1	43373805	1748
ENSMUSG00000028357	protein_coding	Kif12	ENSMUST00000124739	nonsense_mediated_decay		4	-1	63172033	996
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000099682	protein_coding	alternative2	2	-1	101628942	895
ENSMUSG00000038982	protein_coding	Bloc1s5	ENSMUST00000035899	protein_coding	principal1	13	-1	38635109	5634
ENSMUSG00000108929	protein_coding	Cc2d2b	ENSMUST00000207791	processed_transcript		19	1	40784937	544
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000138903	processed_transcript		2	-1	101584934	483
ENSMUSG00000100728	lincRNA	Gm29431	ENSMUST00000189848	lincRNA		13	1	54887470	449
ENSMUSG00000028357	protein_coding	Kif12	ENSMUST00000154234	nonsense_mediated_decay		4	-1	63171730	633
ENSMUSG00000038500	protein_coding	Prr3	ENSMUST00000055454	protein_coding	principal1	17	-1	35980236	2727
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000128898	protein_coding		2	-1	101628300	648
ENSMUSG00000038982	protein_coding	Bloc1s5	ENSMUST00000224902	protein_coding		13	-1	38635061	612
ENSMUSG00000019528	protein_coding	Gyg	ENSMUST00000118015	protein_coding		3	-1	20155317	1922
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000177007	retained_intron		2	-1	101629009	1458
ENSMUSG00000107513	processed_pseudogene	Tgif2-ps1	ENSMUST00000203590	processed_pseudogene		4	1	89216864	713
ENSMUSG00000093862	processed_pseudogene	Gm5117	ENSMUST00000178878	processed_pseudogene		8	-1	31739760	2553
ENSMUSG00000038500	protein_coding	Prr3	ENSMUST00000173585	protein_coding		17	-1	35978559	770
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000132640	retained_intron		2	-1	101621046	952
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000145783	retained_intron		7	1	24904358	4243
ENSMUSG00000027165	protein_coding	B230118H07Rik	ENSMUST00000177171	retained_intron		2	-1	101649532	404
ENSMUSG00000085896	lincRNA	5330429C05Rik	ENSMUST00000154615	lincRNA		13	1	54913235	487
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000206011	protein_coding		7	1	24904405	419
ENSMUSG00000019528	protein_coding	Gyg	ENSMUST00000184552	protein_coding		3	-1	20155069	1662
ENSMUSG00000087659	lincRNA	Gm12606	ENSMUST00000129527	lincRNA		4	-1	89272587	1184
ENSMUSG00000030553	protein_coding	Pgpep1l	ENSMUST00000032770	protein_coding		7	-1	68264233	953
ENSMUSG00000035237	protein_coding	Lcat	ENSMUST00000038896	protein_coding	principal1	8	-1	105943382	1342
ENSMUSG00000087659	lincRNA	Gm12606	ENSMUST00000127174	lincRNA		4	-1	89273403	1055
ENSMUSG00000019528	protein_coding	Gyg	ENSMUST00000135475	retained_intron		3	-1	20123543	731
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000117419	protein_coding	alternative2	7	1	24904407	3214
ENSMUSG00000030553	protein_coding	Pgpep1l	ENSMUST00000207874	protein_coding	principal1	7	-1	68264233	677
ENSMUSG00000087335	lincRNA	4930526F13Rik	ENSMUST00000144718	lincRNA		13	-1	54930256	1721
ENSMUSG00000087436	antisense	Gm16156	ENSMUST00000141168	antisense		8	1	105934333	713
ENSMUSG00000019528	protein_coding	Gyg	ENSMUST00000178328	protein_coding	principal1	3	-1	20155096	1698
ENSMUSG00000107473	TEC	Gm44255	ENSMUST00000203456	TEC		6	1	77984516	2053
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000205295	protein_coding		7	1	24904440	777
ENSMUSG00000031847	protein_coding	1700030J22Rik	ENSMUST00000070577	protein_coding	principal1	8	-1	116978943	2976
ENSMUSG00000033799	protein_coding	Tasor2	ENSMUST00000096069	protein_coding	principal1	13	-1	3611108	8338
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000151121	protein_coding		7	1	24907647	390
ENSMUSG00000031847	protein_coding	1700030J22Rik	ENSMUST00000213068	protein_coding	principal1	8	-1	116978959	1482
ENSMUSG00000033799	protein_coding	Tasor2	ENSMUST00000222909	protein_coding		13	-1	3585091	5193
ENSMUSG00000033799	protein_coding	Tasor2	ENSMUST00000222615	processed_transcript		13	-1	3569537	268
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000144714	retained_intron		7	1	24912617	1087
ENSMUSG00000019986	protein_coding	Ahi1	ENSMUST00000105525	protein_coding	principal1	10	1	20952547	4851
ENSMUSG00000033799	protein_coding	Tasor2	ENSMUST00000221629	retained_intron		13	-1	3567911	519
ENSMUSG00000059022	protein_coding	Kcp	ENSMUST00000161276	nonsense_mediated_decay		6	-1	29484860	971
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000132751	protein_coding		7	1	24916831	1851
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000174394	processed_transcript		13	1	44729474	428
ENSMUSG00000033799	protein_coding	Tasor2	ENSMUST00000221059	retained_intron		13	-1	3576690	5788
ENSMUSG00000038500	protein_coding	Prr3	ENSMUST00000173872	protein_coding		17	-1	35979526	424
ENSMUSG00000114360	lincRNA	Gm48596	ENSMUST00000224080	lincRNA		13	1	100557426	441
ENSMUSG00000019986	protein_coding	Ahi1	ENSMUST00000214745	retained_intron		10	1	20952625	1375
ENSMUSG00000032864	protein_coding	Rag2	ENSMUST00000044031	protein_coding	principal1	2	1	101624718	3424
ENSMUSG00000114332	processed_pseudogene	Gm8847	ENSMUST00000223825	processed_pseudogene		13	-1	100560032	631
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000129928	retained_intron		7	1	24919202	777
ENSMUSG00000033799	protein_coding	Tasor2	ENSMUST00000222041	retained_intron		13	-1	3611088	1969
ENSMUSG00000044303	protein_coding	Cdkn2a	ENSMUST00000060501	protein_coding	alternative2	4	-1	89282192	852
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000126484	retained_intron		7	1	24923248	775
ENSMUSG00000032864	protein_coding	Rag2	ENSMUST00000111227	protein_coding	principal1	2	1	101624746	1857
ENSMUSG00000029273	protein_coding	Sult1d1	ENSMUST00000113314	protein_coding	principal1	5	-1	87569027	2420
ENSMUSG00000033799	protein_coding	Tasor2	ENSMUST00000222325	retained_intron		13	-1	3600161	558
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000126918	retained_intron		7	1	24923353	821
ENSMUSG00000033799	protein_coding	Tasor2	ENSMUST00000223327	protein_coding		13	-1	3610807	542
ENSMUSG00000108091	processed_pseudogene	Gm44221	ENSMUST00000203552	processed_pseudogene		6	-1	3863436	388
ENSMUSG00000040940	protein_coding	Arhgef1	ENSMUST00000132786	processed_transcript		7	1	24923363	832
ENSMUSG00000093614	processed_pseudogene	Gm20693	ENSMUST00000177431	processed_pseudogene		2	1	101570624	211
ENSMUSG00000019986	protein_coding	Ahi1	ENSMUST00000213104	nonsense_mediated_decay		10	1	20959684	4829
ENSMUSG00000029273	protein_coding	Sult1d1	ENSMUST00000166996	processed_transcript		5	-1	87560191	552
ENSMUSG00000114777	processed_pseudogene	Gm46427	ENSMUST00000224643	processed_pseudogene		13	1	66525979	1568
ENSMUSG00000006711	protein_coding	D130043K22Rik	ENSMUST00000141572	nonsense_mediated_decay		13	1	24845135	4827
ENSMUSG00000019986	protein_coding	Ahi1	ENSMUST00000214893	processed_transcript		10	1	21000537	788
ENSMUSG00000101685	processed_pseudogene	Gm17837	ENSMUST00000186435	processed_pseudogene		1	-1	18263379	985
ENSMUSG00000106045	TEC	Gm42996	ENSMUST00000196116	TEC		5	-1	132206704	1636
ENSMUSG00000019986	protein_coding	Ahi1	ENSMUST00000213852	processed_transcript		10	1	21040820	1038
ENSMUSG00000105720	TEC	Gm42440	ENSMUST00000197906	TEC		5	-1	131934679	2284
ENSMUSG00000019986	protein_coding	Ahi1	ENSMUST00000215543	retained_intron		10	1	21069845	790
ENSMUSG00000061311	protein_coding	Rag1	ENSMUST00000078494	protein_coding	principal1	2	-1	101649501	6608
ENSMUSG00000105584	TEC	Gm42588	ENSMUST00000200538	TEC		5	-1	131609593	1297
ENSMUSG00000067773	protein_coding	Defb41	ENSMUST00000088463	protein_coding		1	-1	18265138	467
ENSMUSG00000106384	TEC	Gm43188	ENSMUST00000200180	TEC		5	-1	132499837	2160
ENSMUSG00000019494	protein_coding	Cops6	ENSMUST00000019638	protein_coding	principal2	5	1	138161071	1787
ENSMUSG00000105475	lincRNA	4930431L21Rik	ENSMUST00000200253	lincRNA		3	-1	33897584	624
ENSMUSG00000044303	protein_coding	Cdkn2a	ENSMUST00000107131	protein_coding	principal3	4	-1	89294653	895
ENSMUSG00000038500	protein_coding	Prr3	ENSMUST00000165613	protein_coding		17	-1	35979448	767
ENSMUSG00000105985	TEC	Gm42993	ENSMUST00000196856	TEC		5	-1	132022934	7325
ENSMUSG00000105475	lincRNA	4930431L21Rik	ENSMUST00000197426	lincRNA		3	-1	33871939	195
ENSMUSG00000105470	TEC	Gm42589	ENSMUST00000199097	TEC		5	-1	131605404	1751
ENSMUSG00000019986	protein_coding	Ahi1	ENSMUST00000163505	protein_coding		10	1	21040820	2067
ENSMUSG00000106049	TEC	Gm43019	ENSMUST00000196948	TEC		5	-1	132437433	2863
ENSMUSG00000111006	TEC	Gm10826	ENSMUST00000215366	TEC		10	-1	21033793	3304
ENSMUSG00000104936	TEC	2610011E03Rik	ENSMUST00000200128	TEC		5	-1	131998413	2235
ENSMUSG00000067773	protein_coding	Defb41	ENSMUST00000097817	protein_coding	principal1	1	-1	18265080	198
ENSMUSG00000019494	protein_coding	Cops6	ENSMUST00000110951	protein_coding	alternative2	5	1	138161100	1098
ENSMUSG00000106395	antisense	Gm42439	ENSMUST00000195931	antisense		5	1	131954992	486
ENSMUSG00000111227	antisense	Gm20149	ENSMUST00000214691	antisense		10	-1	21048899	1667
ENSMUSG00000074071	protein_coding	Fam169b	ENSMUST00000125685	protein_coding	principal2	7	1	68273839	2821
ENSMUSG00000087121	processed_pseudogene	Gm7847	ENSMUST00000151645	processed_pseudogene		18	-1	25824357	777
ENSMUSG00000114685	processed_pseudogene	Gm48351	ENSMUST00000224365	processed_pseudogene		13	1	66534025	198
ENSMUSG00000105773	antisense	4930563F08Rik	ENSMUST00000198640	antisense		5	1	131880269	515
ENSMUSG00000038500	protein_coding	Prr3	ENSMUST00000172900	protein_coding		17	-1	35979808	439
ENSMUSG00000114434	processed_pseudogene	Gm48360	ENSMUST00000224388	processed_pseudogene		13	-1	66551220	1508
ENSMUSG00000019494	protein_coding	Cops6	ENSMUST00000127881	retained_intron		5	1	138161109	812
ENSMUSG00000105598	TEC	Gm43186	ENSMUST00000198130	TEC		5	-1	132535248	824
ENSMUSG00000114645	processed_pseudogene	Gm49531	ENSMUST00000224238	processed_pseudogene		13	-1	66566038	94
ENSMUSG00000106356	TEC	Gm42438	ENSMUST00000197832	TEC		5	-1	131958565	974
ENSMUSG00000074071	protein_coding	Fam169b	ENSMUST00000153805	processed_transcript		7	1	68275995	454
ENSMUSG00000038500	protein_coding	Prr3	ENSMUST00000174849	protein_coding		17	-1	35979808	581
ENSMUSG00000073802	protein_coding	Cdkn2b	ENSMUST00000097981	protein_coding	principal1	4	-1	89311039	1390
ENSMUSG00000074071	protein_coding	Fam169b	ENSMUST00000210558	protein_coding	alternative2	7	1	68275995	2815
ENSMUSG00000114426	processed_pseudogene	Gm10769	ENSMUST00000224484	processed_pseudogene		13	1	66572921	1561
ENSMUSG00000019494	protein_coding	Cops6	ENSMUST00000154867	retained_intron		5	1	138161169	1589
ENSMUSG00000038500	protein_coding	Prr3	ENSMUST00000173724	protein_coding		17	-1	35979679	420
ENSMUSG00000019494	protein_coding	Cops6	ENSMUST00000132639	protein_coding		5	1	138162777	625
ENSMUSG00000074071	protein_coding	Fam169b	ENSMUST00000208070	retained_intron		7	1	68276009	3984
ENSMUSG00000114262	processed_pseudogene	Gm49532	ENSMUST00000225932	processed_pseudogene		13	-1	66592013	101
ENSMUSG00000038500	protein_coding	Prr3	ENSMUST00000173417	retained_intron		17	-1	35979299	425
ENSMUSG00000074071	protein_coding	Fam169b	ENSMUST00000153458	processed_transcript		7	1	68331124	495
ENSMUSG00000006711	protein_coding	D130043K22Rik	ENSMUST00000006893	protein_coding	principal1	13	1	24845135	4973
ENSMUSG00000113604	unprocessed_pseudogene	Gm19786	ENSMUST00000222589	unprocessed_pseudogene		12	1	18559615	580
ENSMUSG00000101306	processed_pseudogene	Gm5252	ENSMUST00000189030	processed_pseudogene		1	1	18708428	909
ENSMUSG00000049124	processed_pseudogene	Gm8186	ENSMUST00000053575	processed_pseudogene		17	-1	26099221	231
ENSMUSG00000114814	processed_pseudogene	Gm48361	ENSMUST00000223830	processed_pseudogene		13	-1	66622905	1220
ENSMUSG00000117410	lincRNA	Gm50304	ENSMUST00000234817	lincRNA		18	1	25839077	265
ENSMUSG00000097964	processed_pseudogene	Gm21045	ENSMUST00000183058	processed_pseudogene		6	-1	78069587	1020
ENSMUSG00000006711	protein_coding	D130043K22Rik	ENSMUST00000169411	processed_transcript		13	1	24880525	372
ENSMUSG00000006711	protein_coding	D130043K22Rik	ENSMUST00000171262	processed_transcript		13	1	24893081	522
ENSMUSG00000074071	protein_coding	Fam169b	ENSMUST00000098378	protein_coding		7	1	68300113	2776
ENSMUSG00000048970	protein_coding	C1galt1c1	ENSMUST00000058265	protein_coding	principal1	X	-1	38635087	1449
ENSMUSG00000117604	processed_transcript	Gm33228	ENSMUST00000234860	processed_transcript		18	1	26007557	1044
ENSMUSG00000029735	protein_coding	Tpk1	ENSMUST00000067888	protein_coding	principal1	6	-1	43666278	2671
ENSMUSG00000107663	lincRNA	Gm44107	ENSMUST00000203242	lincRNA		6	1	100498515	573
ENSMUSG00000117604	processed_transcript	Gm33228	ENSMUST00000234272	lincRNA		18	1	26012303	1630
ENSMUSG00000101644	processed_pseudogene	Gm28343	ENSMUST00000185386	processed_pseudogene		1	1	19037266	112
ENSMUSG00000040345	protein_coding	Arhgap9	ENSMUST00000219511	protein_coding	alternative2	10	1	127321964	2217
ENSMUSG00000096663	protein_coding	Vmn1r103	ENSMUST00000163461	protein_coding	principal1	7	-1	20510534	918
ENSMUSG00000086410	antisense	Gm16158	ENSMUST00000123509	antisense		7	-1	68353182	785
ENSMUSG00000113724	processed_pseudogene	Gm48398	ENSMUST00000220919	processed_pseudogene		12	1	18610384	217
ENSMUSG00000086410	antisense	Gm16158	ENSMUST00000129965	antisense		7	-1	68353201	677
ENSMUSG00000085611	processed_pseudogene	Ap3s1-ps1	ENSMUST00000117113	processed_pseudogene		X	-1	38686170	579
ENSMUSG00000113541	processed_pseudogene	Gm48409	ENSMUST00000220910	processed_pseudogene		12	-1	18641025	94
ENSMUSG00000109096	TEC	Gm44888	ENSMUST00000209119	TEC		7	1	68332989	2541
ENSMUSG00000109453	TEC	4930405G09Rik	ENSMUST00000207912	TEC		7	-1	68317032	1060
ENSMUSG00000029735	protein_coding	Tpk1	ENSMUST00000203649	processed_transcript		6	-1	43625966	2600
ENSMUSG00000117456	lincRNA	Gm49976	ENSMUST00000234570	lincRNA		18	-1	26918097	647
ENSMUSG00000029735	protein_coding	Tpk1	ENSMUST00000114644	protein_coding		6	-1	43666175	2148
ENSMUSG00000085635	lincRNA	Gm14565	ENSMUST00000140021	lincRNA		X	-1	38737762	2494
ENSMUSG00000086628	antisense	Gm16157	ENSMUST00000135564	antisense		7	-1	68275098	1082
ENSMUSG00000029735	protein_coding	Tpk1	ENSMUST00000149424	processed_transcript		6	-1	43476520	359
ENSMUSG00000086628	antisense	Gm16157	ENSMUST00000124813	antisense		7	-1	68276594	534
ENSMUSG00000040345	protein_coding	Arhgap9	ENSMUST00000219026	protein_coding	principal2	10	1	127323707	1946
ENSMUSG00000015837	protein_coding	Sqstm1	ENSMUST00000015981	protein_coding	alternative2	11	-1	50210791	2673
ENSMUSG00000029735	protein_coding	Tpk1	ENSMUST00000150599	processed_transcript		6	-1	43666219	1767
ENSMUSG00000029735	protein_coding	Tpk1	ENSMUST00000114643	processed_transcript		6	-1	43665881	295
ENSMUSG00000040345	protein_coding	Arhgap9	ENSMUST00000069548	protein_coding	principal2	10	1	127323756	1782
ENSMUSG00000076747	TR_V_gene	Trgv5	ENSMUST00000199017	TR_V_gene		13	1	19192278	341
ENSMUSG00000076747	TR_V_gene	Trgv5	ENSMUST00000103556	TR_V_gene	principal1	13	1	19192433	293
ENSMUSG00000059022	protein_coding	Kcp	ENSMUST00000159479	nonsense_mediated_decay		6	-1	29495914	2676
ENSMUSG00000027801	protein_coding	Tm4sf4	ENSMUST00000029377	protein_coding	principal1	3	1	57425314	1496
ENSMUSG00000072919	protein_coding	Noxred1	ENSMUST00000222480	protein_coding	principal1	12	-1	87238732	1626
ENSMUSG00000076744	TR_V_gene	Trgv7	ENSMUST00000103553	TR_V_gene	principal1	13	1	19178024	368
ENSMUSG00000072919	protein_coding	Noxred1	ENSMUST00000221768	protein_coding		12	-1	87237015	656
ENSMUSG00000112192	lincRNA	Gm48341	ENSMUST00000219168	lincRNA		10	-1	121001061	367
ENSMUSG00000040345	protein_coding	Arhgap9	ENSMUST00000218656	retained_intron		10	1	127324323	2998
ENSMUSG00000072919	protein_coding	Noxred1	ENSMUST00000021423	protein_coding	principal1	12	-1	87233556	1101
ENSMUSG00000076746	TR_V_gene	Trgv6	ENSMUST00000198330	TR_V_gene	principal5	13	1	19190356	376
ENSMUSG00000015837	protein_coding	Sqstm1	ENSMUST00000102774	protein_coding	principal3	11	-1	50210827	2037
ENSMUSG00000076746	TR_V_gene	Trgv6	ENSMUST00000103555	TR_V_gene	alternative2	13	1	19190368	403
ENSMUSG00000099433	processed_pseudogene	Gm28344	ENSMUST00000185704	processed_pseudogene		1	1	19062857	279
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000174068	protein_coding		13	1	44729535	644
ENSMUSG00000076745	TR_V_gene	Trgv4	ENSMUST00000103554	TR_V_gene	principal1	13	1	19184974	426
ENSMUSG00000032878	protein_coding	Ccdc85a	ENSMUST00000160016	protein_coding		11	-1	28434110	501
ENSMUSG00000015837	protein_coding	Sqstm1	ENSMUST00000136936	protein_coding		11	-1	50202954	953
ENSMUSG00000058672	protein_coding	Tubb2a	ENSMUST00000056427	protein_coding	principal1	13	-1	34078007	1610
ENSMUSG00000083538	processed_pseudogene	Gm16016	ENSMUST00000120831	processed_pseudogene		3	1	57528232	550
ENSMUSG00000067889	protein_coding	Sptbn2	ENSMUST00000008991	protein_coding	principal1	19	1	4711167	8299
ENSMUSG00000002058	protein_coding	Unc119	ENSMUST00000002127	protein_coding	principal1	11	1	78343482	1329
ENSMUSG00000105715	antisense	Gm31887	ENSMUST00000197661	antisense		13	-1	19193558	501
ENSMUSG00000114327	lincRNA	Gm40988	ENSMUST00000225998	lincRNA		13	1	66680954	818
ENSMUSG00000015837	protein_coding	Sqstm1	ENSMUST00000143379	protein_coding		11	-1	50210765	1266
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000172830	protein_coding		13	1	44729795	476
ENSMUSG00000114549	unprocessed_pseudogene	Vmn2r-ps106	ENSMUST00000224860	unprocessed_pseudogene		13	-1	66688352	1621
ENSMUSG00000015837	protein_coding	Sqstm1	ENSMUST00000131214	retained_intron		11	-1	50206100	582
ENSMUSG00000074830	transcribed_processed_pseudogene	Zfp640	ENSMUST00000224116	transcribed_processed_pseudogene		13	-1	66673329	1562
ENSMUSG00000002058	protein_coding	Unc119	ENSMUST00000154700	retained_intron		11	1	78343498	921
ENSMUSG00000067889	protein_coding	Sptbn2	ENSMUST00000237694	protein_coding		19	1	4712384	626
ENSMUSG00000074830	transcribed_processed_pseudogene	Zfp640	ENSMUST00000071320	processed_transcript		13	-1	66698243	894
ENSMUSG00000015837	protein_coding	Sqstm1	ENSMUST00000147846	retained_intron		11	-1	50203118	457
ENSMUSG00000067889	protein_coding	Sptbn2	ENSMUST00000238976	protein_coding		19	1	4721079	606
ENSMUSG00000015837	protein_coding	Sqstm1	ENSMUST00000154805	retained_intron		11	-1	50207319	585
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000131671	protein_coding		4	1	136310942	2543
ENSMUSG00000002058	protein_coding	Unc119	ENSMUST00000108295	protein_coding		11	1	78343506	1371
ENSMUSG00000067889	protein_coding	Sptbn2	ENSMUST00000238162	processed_transcript		19	1	4741779	360
ENSMUSG00000101553	lincRNA	1700049E22Rik	ENSMUST00000187986	lincRNA		6	1	100527400	507
ENSMUSG00000020381	protein_coding	Mrnip	ENSMUST00000143480	processed_transcript		11	1	50174444	837
ENSMUSG00000095913	antisense	Gm21844	ENSMUST00000178699	antisense		19	1	4801512	663
ENSMUSG00000025010	protein_coding	Ccnj	ENSMUST00000025983	protein_coding	principal1	19	1	40831279	3819
ENSMUSG00000002058	protein_coding	Unc119	ENSMUST00000149161	retained_intron		11	1	78343545	1185
ENSMUSG00000025010	protein_coding	Ccnj	ENSMUST00000119316	protein_coding	principal1	19	1	40831308	3763
ENSMUSG00000002058	protein_coding	Unc119	ENSMUST00000100755	protein_coding		11	1	78346666	933
ENSMUSG00000041477	protein_coding	Dcp1b	ENSMUST00000112777	protein_coding	principal2	6	1	119175253	3313
ENSMUSG00000002058	protein_coding	Unc119	ENSMUST00000155471	retained_intron		11	1	78346911	744
ENSMUSG00000010663	protein_coding	Fads1	ENSMUST00000010807	protein_coding	principal1	19	1	10182888	3460
ENSMUSG00000041477	protein_coding	Dcp1b	ENSMUST00000073909	protein_coding	alternative2	6	1	119175288	1748
ENSMUSG00000002058	protein_coding	Unc119	ENSMUST00000125720	retained_intron		11	1	78347935	859
ENSMUSG00000085147	processed_transcript	Gm12609	ENSMUST00000129908	processed_transcript		4	1	89381957	610
ENSMUSG00000108045	processed_pseudogene	Gm5576	ENSMUST00000075809	processed_pseudogene		6	1	78215878	1236
ENSMUSG00000118394	lincRNA	Gm50475	ENSMUST00000238664	lincRNA		4	-1	131921528	511
ENSMUSG00000010663	protein_coding	Fads1	ENSMUST00000235160	protein_coding		19	1	10182939	3301
ENSMUSG00000070720	protein_coding	Tmem200b	ENSMUST00000238733	protein_coding	principal1	4	1	131921200	961
ENSMUSG00000070720	protein_coding	Tmem200b	ENSMUST00000094666	protein_coding	principal1	4	1	131921771	1370
ENSMUSG00000041477	protein_coding	Dcp1b	ENSMUST00000149651	retained_intron		6	1	119192356	4209
ENSMUSG00000004364	protein_coding	Cul3	ENSMUST00000163119	protein_coding	principal1	1	-1	80340480	4709
ENSMUSG00000086035	processed_transcript	Gm12610	ENSMUST00000139272	processed_transcript		4	1	89421848	581
ENSMUSG00000039693	protein_coding	Msantd3	ENSMUST00000061135	protein_coding	principal1	4	1	48539935	1589
ENSMUSG00000041477	protein_coding	Dcp1b	ENSMUST00000136437	retained_intron		6	1	119200461	698
ENSMUSG00000010663	protein_coding	Fads1	ENSMUST00000237221	retained_intron		19	1	10182985	1310
ENSMUSG00000041477	protein_coding	Dcp1b	ENSMUST00000127059	retained_intron		6	1	119217544	2048
ENSMUSG00000010663	protein_coding	Fads1	ENSMUST00000235515	nonsense_mediated_decay		19	1	10183039	934
ENSMUSG00000004364	protein_coding	Cul3	ENSMUST00000164108	protein_coding		1	-1	80340311	2442
ENSMUSG00000080808	processed_pseudogene	Gm12608	ENSMUST00000122013	processed_pseudogene		4	-1	89444644	1715
ENSMUSG00000100867	processed_pseudogene	Gm18981	ENSMUST00000185373	processed_pseudogene		6	-1	118619224	1599
ENSMUSG00000010663	protein_coding	Fads1	ENSMUST00000236594	protein_coding		19	1	10183554	742
ENSMUSG00000033760	protein_coding	Rbm4b	ENSMUST00000235278	nonsense_mediated_decay		19	1	4756497	1606
ENSMUSG00000033760	protein_coding	Rbm4b	ENSMUST00000236797	nonsense_mediated_decay		19	1	4756510	2110
ENSMUSG00000039693	protein_coding	Msantd3	ENSMUST00000064807	protein_coding	principal1	4	1	48540079	1378
ENSMUSG00000010663	protein_coding	Fads1	ENSMUST00000238115	retained_intron		19	1	10192912	837
ENSMUSG00000033760	protein_coding	Rbm4b	ENSMUST00000236160	nonsense_mediated_decay		19	1	4756510	2106
ENSMUSG00000010663	protein_coding	Fads1	ENSMUST00000237861	protein_coding		19	1	10192973	422
ENSMUSG00000020381	protein_coding	Mrnip	ENSMUST00000020647	protein_coding	principal1	11	1	50174849	1142
ENSMUSG00000004364	protein_coding	Cul3	ENSMUST00000168372	protein_coding		1	-1	80277441	543
ENSMUSG00000097740	lincRNA	E030044B06Rik	ENSMUST00000236606	lincRNA		19	1	40868304	850
ENSMUSG00000033760	protein_coding	Rbm4b	ENSMUST00000182821	protein_coding	principal1	19	1	4756543	1443
ENSMUSG00000097740	lincRNA	E030044B06Rik	ENSMUST00000237948	lincRNA		19	1	40868316	880
ENSMUSG00000004364	protein_coding	Cul3	ENSMUST00000167794	retained_intron		1	-1	80276566	532
ENSMUSG00000020457	protein_coding	Drg1	ENSMUST00000159304	nonsense_mediated_decay		11	-1	3252685	332
ENSMUSG00000020381	protein_coding	Mrnip	ENSMUST00000123164	nonsense_mediated_decay		11	1	50174907	471
ENSMUSG00000039693	protein_coding	Msantd3	ENSMUST00000107704	protein_coding	principal1	4	1	48540499	1597
ENSMUSG00000032878	protein_coding	Ccdc85a	ENSMUST00000140601	protein_coding		11	-1	28576437	448
ENSMUSG00000029272	protein_coding	Sult1e1	ENSMUST00000031201	protein_coding	principal1	5	-1	87591594	1242
ENSMUSG00000097740	lincRNA	E030044B06Rik	ENSMUST00000181195	lincRNA		19	1	40868386	1266
ENSMUSG00000010663	protein_coding	Fads1	ENSMUST00000236385	processed_transcript		19	1	10193319	472
ENSMUSG00000039693	protein_coding	Msantd3	ENSMUST00000146240	processed_transcript		4	1	48540546	273
ENSMUSG00000033760	protein_coding	Rbm4b	ENSMUST00000183008	retained_intron		19	1	4756564	1211
ENSMUSG00000004364	protein_coding	Cul3	ENSMUST00000170897	nonsense_mediated_decay		1	-1	80340307	600
ENSMUSG00000039693	protein_coding	Msantd3	ENSMUST00000132360	processed_transcript		4	1	48559947	1119
ENSMUSG00000004364	protein_coding	Cul3	ENSMUST00000167293	nonsense_mediated_decay		1	-1	80340279	681
ENSMUSG00000008333	protein_coding	Snrpb2	ENSMUST00000008477	protein_coding	principal1	2	1	143063039	2061
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000107658	protein_coding	principal3	11	-1	96827955	4219
ENSMUSG00000103076	TEC	Gm37902	ENSMUST00000192839	TEC		1	-1	80276413	1683
ENSMUSG00000114067	transcribed_unprocessed_pseudogene	Gm47065	ENSMUST00000221908	transcribed_unprocessed_pseudogene		13	-1	34089027	451
ENSMUSG00000024791	protein_coding	Cdca5	ENSMUST00000025704	protein_coding	principal1	19	1	6084983	2024
ENSMUSG00000033760	protein_coding	Rbm4b	ENSMUST00000182065	retained_intron		19	1	4756565	4194
ENSMUSG00000103525	TEC	Gm37262	ENSMUST00000192816	TEC		1	-1	80327994	1818
ENSMUSG00000089787	antisense	Gm15825	ENSMUST00000159108	antisense		1	-1	19104840	918
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000107659	protein_coding		11	-1	96827719	2351
ENSMUSG00000020599	protein_coding	Rgs9	ENSMUST00000020920	protein_coding		11	-1	109298129	2434
ENSMUSG00000113591	processed_transcript	4930447K03Rik	ENSMUST00000222745	processed_transcript		13	-1	34113272	1033
ENSMUSG00000008333	protein_coding	Snrpb2	ENSMUST00000139114	retained_intron		2	1	143063061	686
ENSMUSG00000033760	protein_coding	Rbm4b	ENSMUST00000036744	protein_coding	principal1	19	1	4756571	1783
ENSMUSG00000020599	protein_coding	Rgs9	ENSMUST00000103062	protein_coding		11	-1	109250151	1743
ENSMUSG00000008333	protein_coding	Snrpb2	ENSMUST00000134091	retained_intron		2	1	143068173	1827
ENSMUSG00000008333	protein_coding	Snrpb2	ENSMUST00000126763	protein_coding		2	1	143063131	636
ENSMUSG00000061577	protein_coding	Adgrg5	ENSMUST00000153448	protein_coding		8	1	94923694	407
ENSMUSG00000034424	protein_coding	Gcsh	ENSMUST00000040484	protein_coding	principal1	8	-1	116993537	1443
ENSMUSG00000033760	protein_coding	Rbm4b	ENSMUST00000182200	nonsense_mediated_decay		19	1	4756581	3109
ENSMUSG00000008333	protein_coding	Snrpb2	ENSMUST00000127760	retained_intron		2	1	143064402	594
ENSMUSG00000082723	processed_pseudogene	Gm14564	ENSMUST00000122159	processed_pseudogene		X	1	38762743	294
ENSMUSG00000033760	protein_coding	Rbm4b	ENSMUST00000237921	protein_coding		19	1	4756905	914
ENSMUSG00000020599	protein_coding	Rgs9	ENSMUST00000106706	protein_coding	principal1	11	-1	109298066	2313
ENSMUSG00000027803	protein_coding	Wwtr1	ENSMUST00000029380	protein_coding	principal3	3	-1	57575828	4697
ENSMUSG00000034424	protein_coding	Gcsh	ENSMUST00000162548	processed_transcript		8	-1	116991361	384
ENSMUSG00000033760	protein_coding	Rbm4b	ENSMUST00000183332	retained_intron		19	1	4761396	5670
ENSMUSG00000037159	protein_coding	Wee2	ENSMUST00000202464	protein_coding		6	1	40439088	785
ENSMUSG00000020599	protein_coding	Rgs9	ENSMUST00000156785	processed_transcript		11	-1	109246965	597
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000107657	protein_coding	principal3	11	-1	96829955	3869
ENSMUSG00000020599	protein_coding	Rgs9	ENSMUST00000106704	protein_coding		11	-1	109298106	3464
ENSMUSG00000024791	protein_coding	Cdca5	ENSMUST00000156961	processed_transcript		19	1	6085751	1794
ENSMUSG00000051361	protein_coding	6030498E09Rik	ENSMUST00000050744	protein_coding	principal1	X	1	38772671	1291
ENSMUSG00000024791	protein_coding	Cdca5	ENSMUST00000152528	processed_transcript		19	1	6085827	1735
ENSMUSG00000051361	protein_coding	6030498E09Rik	ENSMUST00000168144	protein_coding	principal1	X	1	38958084	510
ENSMUSG00000027803	protein_coding	Wwtr1	ENSMUST00000120977	protein_coding	alternative2	3	-1	57575910	4533
ENSMUSG00000081147	processed_pseudogene	Gm6024	ENSMUST00000117850	processed_pseudogene		X	-1	38906628	1558
ENSMUSG00000002608	protein_coding	Ccdc97	ENSMUST00000002683	protein_coding	principal1	7	-1	25719088	3032
ENSMUSG00000080896	processed_pseudogene	Gm14567	ENSMUST00000117155	processed_pseudogene		X	1	38969817	174
ENSMUSG00000042596	protein_coding	Tfap2d	ENSMUST00000037294	protein_coding	principal1	1	1	19103022	1761
ENSMUSG00000084030	processed_pseudogene	Gm16423	ENSMUST00000120078	processed_pseudogene		X	-1	39113607	947
ENSMUSG00000084039	processed_pseudogene	Gm14551	ENSMUST00000120802	processed_pseudogene		X	1	39119656	256
ENSMUSG00000084247	processed_pseudogene	Gm14566	ENSMUST00000118915	processed_pseudogene		X	-1	39226648	321
ENSMUSG00000002608	protein_coding	Ccdc97	ENSMUST00000134201	processed_transcript		7	-1	25716106	775
ENSMUSG00000056687	antisense	Gm11696	ENSMUST00000188296	antisense		11	-1	109363210	1793
ENSMUSG00000002608	protein_coding	Ccdc97	ENSMUST00000154143	retained_intron		7	-1	25719003	1158
ENSMUSG00000056687	antisense	Gm11696	ENSMUST00000187514	antisense		11	-1	109354425	549
ENSMUSG00000042596	protein_coding	Tfap2d	ENSMUST00000149505	processed_transcript		1	1	19107181	745
ENSMUSG00000006456	protein_coding	Rbm14	ENSMUST00000006625	protein_coding	principal1	19	-1	4811634	3165
ENSMUSG00000032878	protein_coding	Ccdc85a	ENSMUST00000093253	protein_coding	principal3	11	-1	28584296	5431
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000126949	protein_coding		11	-1	96824127	851
ENSMUSG00000100720	processed_pseudogene	Gm10075	ENSMUST00000162030	processed_pseudogene		1	-1	19153966	545
ENSMUSG00000109882	processed_pseudogene	Gm18706	ENSMUST00000210053	processed_pseudogene		7	-1	46092961	1066
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000142065	protein_coding		11	-1	96824008	486
ENSMUSG00000006456	protein_coding	Rbm14	ENSMUST00000113793	protein_coding		19	-1	4811585	3508
ENSMUSG00000032878	protein_coding	Ccdc85a	ENSMUST00000146385	protein_coding	alternative2	11	-1	28583995	3798
ENSMUSG00000081006	unprocessed_pseudogene	Cyp4b1-ps1	ENSMUST00000118753	unprocessed_pseudogene		4	-1	115545064	315
ENSMUSG00000006456	protein_coding	Rbm14	ENSMUST00000180008	protein_coding		19	-1	4811512	370
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000134951	processed_transcript		11	-1	96822725	597
ENSMUSG00000056687	antisense	Gm11696	ENSMUST00000070956	antisense		11	-1	109363654	2765
ENSMUSG00000002608	protein_coding	Ccdc97	ENSMUST00000125699	protein_coding		7	-1	25719045	926
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000140138	processed_transcript		11	-1	96824552	354
ENSMUSG00000106217	processed_pseudogene	Gm43368	ENSMUST00000200638	processed_pseudogene		5	1	87601071	409
ENSMUSG00000056687	antisense	Gm11696	ENSMUST00000190563	antisense		11	-1	109363243	450
ENSMUSG00000002608	protein_coding	Ccdc97	ENSMUST00000129519	retained_intron		7	-1	25716394	771
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000105850	protein_coding	principal1	4	1	136310968	2683
ENSMUSG00000096370	protein_coding	Gm21992	ENSMUST00000178353	nonsense_mediated_decay		19	-1	4811612	2590
ENSMUSG00000114839	processed_pseudogene	Gm40989	ENSMUST00000225542	processed_pseudogene		13	-1	66741313	1153
ENSMUSG00000037159	protein_coding	Wee2	ENSMUST00000038907	protein_coding	principal1	6	1	40442863	2884
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000135836	processed_transcript		11	-1	96829501	582
ENSMUSG00000105246	processed_pseudogene	Gm21043	ENSMUST00000199316	processed_pseudogene		5	1	87603702	1517
ENSMUSG00000099630	lincRNA	1700096J18Rik	ENSMUST00000190043	lincRNA		11	1	109346839	482
ENSMUSG00000114423	processed_pseudogene	Gm48404	ENSMUST00000224301	processed_pseudogene		13	-1	66756486	153
ENSMUSG00000114226	lincRNA	Gm48412	ENSMUST00000223696	lincRNA		13	1	66777441	818
ENSMUSG00000096370	protein_coding	Gm21992	ENSMUST00000179909	protein_coding		19	-1	4811508	1435
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000107692	protein_coding		3	-1	84304809	7161
ENSMUSG00000032878	protein_coding	Ccdc85a	ENSMUST00000042534	protein_coding	alternative2	11	-1	28584324	5332
ENSMUSG00000028736	protein_coding	Pax7	ENSMUST00000030508	protein_coding	principal2	4	-1	139833528	5854
ENSMUSG00000096370	protein_coding	Gm21992	ENSMUST00000178404	protein_coding		19	-1	4811212	456
ENSMUSG00000037159	protein_coding	Wee2	ENSMUST00000141490	protein_coding		6	1	40442937	613
ENSMUSG00000096370	protein_coding	Gm21992	ENSMUST00000172000	protein_coding	principal1	19	-1	4811508	1434
ENSMUSG00000002608	protein_coding	Ccdc97	ENSMUST00000156365	processed_transcript		7	-1	25718991	515
ENSMUSG00000028736	protein_coding	Pax7	ENSMUST00000174681	protein_coding	alternative1	4	-1	139833007	1725
ENSMUSG00000032878	protein_coding	Ccdc85a	ENSMUST00000109501	retained_intron		11	-1	28584266	3134
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000107691	protein_coding		3	-1	84259812	7428
ENSMUSG00000096370	protein_coding	Gm21992	ENSMUST00000178727	retained_intron		19	-1	4811603	2432
ENSMUSG00000002608	protein_coding	Ccdc97	ENSMUST00000137046	processed_transcript		7	-1	25719006	508
ENSMUSG00000096146	protein_coding	Kcnj11	ENSMUST00000209863	processed_transcript		7	-1	46098426	472
ENSMUSG00000027416	protein_coding	Otor	ENSMUST00000028902	protein_coding	principal1	2	1	143078473	949
ENSMUSG00000002608	protein_coding	Ccdc97	ENSMUST00000129429	processed_transcript		7	-1	25719055	363
ENSMUSG00000087646	lincRNA	Gm1667	ENSMUST00000151651	lincRNA		4	1	139910488	558
ENSMUSG00000096370	protein_coding	Gm21992	ENSMUST00000177776	processed_transcript		19	-1	4802002	556
ENSMUSG00000032691	protein_coding	Nlrp3	ENSMUST00000079476	protein_coding	principal1	11	1	59541568	3933
ENSMUSG00000096146	protein_coding	Kcnj11	ENSMUST00000211674	protein_coding	principal1	7	-1	46100237	3142
ENSMUSG00000002608	protein_coding	Ccdc97	ENSMUST00000140847	processed_transcript		7	-1	25719067	379
ENSMUSG00000032878	protein_coding	Ccdc85a	ENSMUST00000109502	protein_coding		11	-1	28584296	5220
ENSMUSG00000032691	protein_coding	Nlrp3	ENSMUST00000149126	protein_coding		11	1	59542756	676
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000148843	protein_coding	principal1	4	1	136310968	21452
ENSMUSG00000096146	protein_coding	Kcnj11	ENSMUST00000180081	protein_coding		7	-1	46100764	917
ENSMUSG00000087687	protein_coding	Pet100	ENSMUST00000208950	nonsense_mediated_decay		8	1	3621548	656
ENSMUSG00000107341	lincRNA	1700065J11Rik	ENSMUST00000201560	lincRNA		6	1	35330846	424
ENSMUSG00000096146	protein_coding	Kcnj11	ENSMUST00000209881	protein_coding		7	-1	46099903	434
ENSMUSG00000087687	protein_coding	Pet100	ENSMUST00000208185	retained_intron		8	1	3621551	376
ENSMUSG00000096171	processed_pseudogene	Gm8055	ENSMUST00000099956	processed_pseudogene		10	1	40011866	1008
ENSMUSG00000020457	protein_coding	Drg1	ENSMUST00000020741	protein_coding	principal1	11	-1	3266393	1546
ENSMUSG00000096146	protein_coding	Kcnj11	ENSMUST00000209291	protein_coding		7	-1	46100658	494
ENSMUSG00000020611	protein_coding	Gna13	ENSMUST00000020930	protein_coding	principal1	11	1	109362831	6160
ENSMUSG00000032691	protein_coding	Nlrp3	ENSMUST00000101148	protein_coding	principal1	11	1	59542686	4021
ENSMUSG00000079619	protein_coding	Cypt15	ENSMUST00000115114	protein_coding	principal1	X	1	39346267	519
ENSMUSG00000024302	protein_coding	Dtna	ENSMUST00000115832	protein_coding	alternative1	18	1	23415442	6295
ENSMUSG00000096903	protein_coding	Vmn1r104	ENSMUST00000169689	protein_coding	principal1	7	1	20533837	924
ENSMUSG00000114353	transcribed_processed_pseudogene	Gm7896	ENSMUST00000224253	transcribed_processed_pseudogene		13	-1	66795024	1563
ENSMUSG00000087687	protein_coding	Pet100	ENSMUST00000156380	protein_coding	principal1	8	1	3621551	1193
ENSMUSG00000020457	protein_coding	Drg1	ENSMUST00000139430	retained_intron		11	-1	3252859	608
ENSMUSG00000114353	transcribed_processed_pseudogene	Gm7896	ENSMUST00000224917	processed_transcript		13	-1	66802560	464
ENSMUSG00000020611	protein_coding	Gna13	ENSMUST00000106702	protein_coding		11	1	109362831	914
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000161226	processed_transcript		5	-1	132543344	7409
ENSMUSG00000081324	processed_pseudogene	Gm14550	ENSMUST00000117918	processed_pseudogene		X	-1	39465185	407
ENSMUSG00000114314	processed_pseudogene	Gm48413	ENSMUST00000224105	processed_pseudogene		13	1	66799297	94
ENSMUSG00000082903	processed_pseudogene	Gm14083	ENSMUST00000117873	processed_pseudogene		2	-1	143130339	620
ENSMUSG00000083047	processed_pseudogene	Gm14082	ENSMUST00000118582	processed_pseudogene		2	-1	143151630	801
ENSMUSG00000087687	protein_coding	Pet100	ENSMUST00000207257	processed_transcript		8	1	3621555	261
ENSMUSG00000043753	protein_coding	Dmrta1	ENSMUST00000131576	processed_transcript		4	1	89679436	599
ENSMUSG00000020457	protein_coding	Drg1	ENSMUST00000142605	retained_intron		11	-1	3262536	520
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000084219	protein_coding		4	1	136311025	2647
ENSMUSG00000087687	protein_coding	Pet100	ENSMUST00000207428	nonsense_mediated_decay		8	1	3621597	552
ENSMUSG00000096761	protein_coding	Vmn1r245	ENSMUST00000173886	protein_coding	principal1	7	-1	20545757	924
ENSMUSG00000020457	protein_coding	Drg1	ENSMUST00000166162	processed_transcript		11	-1	3266392	488
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000169828	protein_coding		11	-1	96824127	3530
ENSMUSG00000117784	unprocessed_pseudogene	Vmn2r-ps108	ENSMUST00000222552	unprocessed_pseudogene		13	-1	66815219	2241
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000105611	protein_coding		10	1	6788809	2420
ENSMUSG00000114793	processed_pseudogene	Gm48414	ENSMUST00000225417	processed_pseudogene		13	-1	66846036	213
ENSMUSG00000020457	protein_coding	Drg1	ENSMUST00000125424	retained_intron		11	-1	3266415	2093
ENSMUSG00000024742	protein_coding	Fen1	ENSMUST00000156291	protein_coding	principal1	19	-1	10204169	2373
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000145282	nonsense_mediated_decay		4	1	136311028	859
ENSMUSG00000087687	protein_coding	Pet100	ENSMUST00000207389	protein_coding		8	1	3621602	363
ENSMUSG00000020457	protein_coding	Drg1	ENSMUST00000132159	nonsense_mediated_decay		11	-1	3266393	350
ENSMUSG00000095837	protein_coding	Vmn1r246	ENSMUST00000174364	protein_coding	principal1	7	-1	20576241	921
ENSMUSG00000027315	protein_coding	Spint1	ENSMUST00000028783	protein_coding	principal1	2	1	119237362	2273
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000167110	protein_coding	alternative2	11	-1	96824013	3547
ENSMUSG00000038522	protein_coding	Mfsd4b1	ENSMUST00000163705	protein_coding	principal1	10	-1	40025268	2677
ENSMUSG00000024302	protein_coding	Dtna	ENSMUST00000221880	protein_coding	alternative1	18	1	23415477	4490
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000125696	protein_coding		4	1	136311535	576
ENSMUSG00000043753	protein_coding	Dmrta1	ENSMUST00000052478	protein_coding	principal1	4	1	89688198	4079
ENSMUSG00000086049	antisense	Gm12735	ENSMUST00000146218	antisense		11	-1	3194263	651
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000134524	protein_coding		4	1	136311591	980
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000081775	protein_coding	principal3	11	-1	96829968	4654
ENSMUSG00000024302	protein_coding	Dtna	ENSMUST00000220904	protein_coding		18	1	23415490	3860
ENSMUSG00000081208	processed_pseudogene	Gm11400	ENSMUST00000120853	processed_pseudogene		11	-1	3150955	1214
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000156259	protein_coding		4	1	136311685	292
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000218060	lincRNA		10	-1	92103936	997
ENSMUSG00000027315	protein_coding	Spint1	ENSMUST00000110816	protein_coding	principal1	2	1	119237477	1913
ENSMUSG00000084966	lincRNA	2810471M01Rik	ENSMUST00000146554	lincRNA		11	1	28681564	1597
ENSMUSG00000038615	protein_coding	Nfe2l1	ENSMUST00000167149	protein_coding	principal3	11	-1	96829502	4596
ENSMUSG00000085690	lincRNA	Gm12629	ENSMUST00000145751	lincRNA		4	1	90185527	711
ENSMUSG00000038522	protein_coding	Mfsd4b1	ENSMUST00000176975	processed_transcript		10	-1	40025159	488
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000218255	lincRNA		10	-1	92071710	309
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000153505	retained_intron		4	1	136336073	473
ENSMUSG00000118155	lincRNA	Gm50136	ENSMUST00000237212	lincRNA		19	1	23061454	1282
ENSMUSG00000038522	protein_coding	Mfsd4b1	ENSMUST00000239109	retained_intron		10	-1	40025195	1343
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000182327	retained_intron		4	1	136339019	3948
ENSMUSG00000118155	lincRNA	Gm50136	ENSMUST00000235884	lincRNA		19	1	23061466	1373
ENSMUSG00000111608	processed_pseudogene	Gm48839	ENSMUST00000214611	processed_pseudogene		10	1	40009555	382
ENSMUSG00000118155	lincRNA	Gm50136	ENSMUST00000235686	lincRNA		19	1	23061473	1287
ENSMUSG00000109060	protein_coding	Gm4513	ENSMUST00000207881	protein_coding	principal1	7	-1	20599021	1438
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000220192	lincRNA		10	-1	92103789	413
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000107695	protein_coding	principal3	3	-1	84220889	7200
ENSMUSG00000066037	protein_coding	Hnrnpr	ENSMUST00000180855	processed_transcript		4	1	136355774	1919
ENSMUSG00000024742	protein_coding	Fen1	ENSMUST00000116542	protein_coding	principal1	19	-1	10203943	2100
ENSMUSG00000079224	processed_pseudogene	Gm6565	ENSMUST00000121217	processed_pseudogene		6	1	100604683	438
ENSMUSG00000024302	protein_coding	Dtna	ENSMUST00000047954	protein_coding	principal3	18	1	23415510	1596
ENSMUSG00000098739	antisense	Gm27151	ENSMUST00000183473	antisense		19	-1	22448142	383
ENSMUSG00000070902	protein_coding	Zfp352	ENSMUST00000107129	protein_coding	principal1	4	1	90218820	2276
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000182623	lincRNA		10	-1	92075629	407
ENSMUSG00000108122	TEC	Gm44116	ENSMUST00000204269	TEC		6	-1	100662463	1525
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000063036	protein_coding		10	1	6758593	1427
ENSMUSG00000098155	lincRNA	Gm27022	ENSMUST00000183225	lincRNA		4	-1	136349441	715
ENSMUSG00000027315	protein_coding	Spint1	ENSMUST00000110817	protein_coding	principal1	2	1	119237553	2323
ENSMUSG00000070902	protein_coding	Zfp352	ENSMUST00000080541	protein_coding	principal1	4	1	90223625	1656
ENSMUSG00000108019	processed_pseudogene	Gm44108	ENSMUST00000203525	processed_pseudogene		6	-1	100626940	422
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000065380	protein_coding		3	-1	84212838	4296
ENSMUSG00000098739	antisense	Gm27151	ENSMUST00000185015	antisense		19	-1	22448865	1145
ENSMUSG00000024302	protein_coding	Dtna	ENSMUST00000223441	processed_transcript		18	1	23496835	1489
ENSMUSG00000024742	protein_coding	Fen1	ENSMUST00000025651	protein_coding	principal1	19	-1	10204068	2341
ENSMUSG00000097930	lincRNA	C330002G04Rik	ENSMUST00000236056	lincRNA		19	-1	23075924	816
ENSMUSG00000024302	protein_coding	Dtna	ENSMUST00000220967	retained_intron		18	1	23532759	2941
ENSMUSG00000024302	protein_coding	Dtna	ENSMUST00000222351	retained_intron		18	1	23543562	3086
ENSMUSG00000024302	protein_coding	Dtna	ENSMUST00000222726	protein_coding		18	1	23651568	863
ENSMUSG00000097930	lincRNA	C330002G04Rik	ENSMUST00000181623	lincRNA		19	-1	23075853	2057
ENSMUSG00000027315	protein_coding	Spint1	ENSMUST00000139903	retained_intron		2	1	119246373	640
ENSMUSG00000118353	processed_pseudogene	Nsa2-ps1	ENSMUST00000235917	processed_pseudogene		19	1	22441135	780
ENSMUSG00000024742	protein_coding	Fen1	ENSMUST00000142241	protein_coding	principal1	19	-1	10203894	2152
ENSMUSG00000114088	antisense	Gm47898	ENSMUST00000220789	antisense		18	-1	23651837	1818
ENSMUSG00000027315	protein_coding	Spint1	ENSMUST00000134872	retained_intron		2	1	119248205	492
ENSMUSG00000098561	unprocessed_pseudogene	Gtpbp4-ps5	ENSMUST00000184969	unprocessed_pseudogene		7	-1	15320260	289
ENSMUSG00000059022	protein_coding	Kcp	ENSMUST00000091391	nonsense_mediated_decay		6	-1	29507937	4758
ENSMUSG00000106616	unprocessed_pseudogene	Obox4-ps25	ENSMUST00000199090	unprocessed_pseudogene		7	-1	15333644	210
ENSMUSG00000024034	protein_coding	Tmprss3	ENSMUST00000024833	protein_coding	principal2	17	-1	31197749	2738
ENSMUSG00000093554	unprocessed_pseudogene	Obox4-ps26	ENSMUST00000176368	unprocessed_pseudogene		7	1	15343518	724
ENSMUSG00000018340	protein_coding	Anxa6	ENSMUST00000108883	protein_coding	principal3	11	-1	55033445	2489
ENSMUSG00000061577	protein_coding	Adgrg5	ENSMUST00000166802	protein_coding	alternative2	8	1	94923694	1879
ENSMUSG00000098744	unprocessed_pseudogene	Ranbp2-ps7	ENSMUST00000183924	unprocessed_pseudogene		7	-1	15370129	384
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000128574	retained_intron		3	-1	84220845	4734
ENSMUSG00000113309	TEC	Gm48408	ENSMUST00000222341	TEC		13	-1	15770120	1131
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000161804	protein_coding	principal5	5	-1	131616605	5392
ENSMUSG00000018340	protein_coding	Anxa6	ENSMUST00000102727	protein_coding	alternative1	11	-1	55033445	2471
ENSMUSG00000094936	protein_coding	Rbm4	ENSMUST00000180248	protein_coding	principal1	19	-1	4793901	2610
ENSMUSG00000051900	protein_coding	Abca16	ENSMUST00000144122	retained_intron		7	1	120409647	3551
ENSMUSG00000113960	lincRNA	4933412O06Rik	ENSMUST00000222681	lincRNA		13	-1	15802630	1123
ENSMUSG00000094936	protein_coding	Rbm4	ENSMUST00000178615	protein_coding		19	-1	4793851	1018
ENSMUSG00000029840	protein_coding	Mtpn	ENSMUST00000031866	protein_coding	principal1	6	-1	35539888	3960
ENSMUSG00000024034	protein_coding	Tmprss3	ENSMUST00000114549	protein_coding		17	-1	31198977	2881
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000182575	processed_transcript		5	-1	132542657	6178
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000054990	protein_coding	alternative1	3	-1	84270791	3816
ENSMUSG00000061577	protein_coding	Adgrg5	ENSMUST00000074570	protein_coding	principal3	8	1	94923694	2802
ENSMUSG00000024034	protein_coding	Tmprss3	ENSMUST00000237740	protein_coding	alternative1	17	-1	31198171	2403
ENSMUSG00000029840	protein_coding	Mtpn	ENSMUST00000201026	protein_coding		6	-1	35539799	409
ENSMUSG00000024034	protein_coding	Tmprss3	ENSMUST00000236793	protein_coding	principal2	17	-1	31198860	2674
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000140568	retained_intron		3	-1	84190523	664
ENSMUSG00000059022	protein_coding	Kcp	ENSMUST00000101614	protein_coding	principal1	6	-1	29507950	4885
ENSMUSG00000094936	protein_coding	Rbm4	ENSMUST00000237760	protein_coding		19	-1	4793880	1197
ENSMUSG00000085510	lincRNA	Mir217hg	ENSMUST00000138164	lincRNA		11	1	28751633	600
ENSMUSG00000102380	TEC	Gm38140	ENSMUST00000193617	TEC		1	-1	134099159	2755
ENSMUSG00000059022	protein_coding	Kcp	ENSMUST00000161655	retained_intron		6	-1	29484972	760
ENSMUSG00000094634	protein_coding	Gm3468	ENSMUST00000165193	protein_coding	principal1	14	-1	6108665	1955
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000137596	retained_intron		3	-1	84220874	3870
ENSMUSG00000094936	protein_coding	Rbm4	ENSMUST00000164209	protein_coding		19	-1	4793900	801
ENSMUSG00000084231	processed_pseudogene	Gm11975	ENSMUST00000118772	processed_pseudogene		11	-1	6559503	481
ENSMUSG00000091752	processed_pseudogene	Gm3208	ENSMUST00000168281	processed_pseudogene		14	1	6202334	427
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000156347	processed_transcript		3	-1	84191548	619
ENSMUSG00000094936	protein_coding	Rbm4	ENSMUST00000179189	protein_coding	principal1	19	-1	4793860	1411
ENSMUSG00000071855	protein_coding	Ccdc112	ENSMUST00000072835	protein_coding	principal2	18	-1	46311928	2801
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000160071	processed_transcript		5	-1	132050337	3571
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000122849	protein_coding		3	-1	84305397	979
ENSMUSG00000094460	protein_coding	Gm21560	ENSMUST00000168480	protein_coding	principal5	14	-1	6219292	2066
ENSMUSG00000059022	protein_coding	Kcp	ENSMUST00000162959	retained_intron		6	-1	29498608	747
ENSMUSG00000094936	protein_coding	Rbm4	ENSMUST00000164376	protein_coding		19	-1	4793880	583
ENSMUSG00000094460	protein_coding	Gm21560	ENSMUST00000177670	protein_coding	alternative2	14	-1	6219210	618
ENSMUSG00000071855	protein_coding	Ccdc112	ENSMUST00000238189	protein_coding		18	-1	46290850	761
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000161374	protein_coding	alternative2	5	-1	131538687	4216
ENSMUSG00000061577	protein_coding	Adgrg5	ENSMUST00000128308	nonsense_mediated_decay		8	1	94923699	2917
ENSMUSG00000071855	protein_coding	Ccdc112	ENSMUST00000235609	retained_intron		18	-1	46292536	1766
ENSMUSG00000036372	protein_coding	Tmem258	ENSMUST00000040372	protein_coding	principal1	19	1	10204014	606
ENSMUSG00000035378	protein_coding	Shq1	ENSMUST00000113312	protein_coding	principal1	6	-1	100671157	6816
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000141897	processed_transcript		10	1	6788975	1939
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000182974	processed_transcript		5	-1	132541871	3856
ENSMUSG00000071855	protein_coding	Ccdc112	ENSMUST00000236934	protein_coding	alternative2	18	-1	46311737	643
ENSMUSG00000094936	protein_coding	Rbm4	ENSMUST00000179820	retained_intron		19	-1	4793883	2965
ENSMUSG00000059022	protein_coding	Kcp	ENSMUST00000160181	nonsense_mediated_decay		6	-1	29502824	802
ENSMUSG00000071855	protein_coding	Ccdc112	ENSMUST00000237152	processed_transcript		18	-1	46311891	556
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000132283	protein_coding		3	-1	84305446	829
ENSMUSG00000107465	processed_pseudogene	Gm5990	ENSMUST00000203126	processed_pseudogene		6	-1	43767310	746
ENSMUSG00000018340	protein_coding	Anxa6	ENSMUST00000148298	processed_transcript		11	-1	55033415	2096
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000162101	protein_coding		5	-1	131460151	816
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000144264	nonsense_mediated_decay		10	1	6788809	2120
ENSMUSG00000061577	protein_coding	Adgrg5	ENSMUST00000142991	processed_transcript		8	1	94934167	358
ENSMUSG00000059022	protein_coding	Kcp	ENSMUST00000161237	nonsense_mediated_decay		6	-1	29507952	845
ENSMUSG00000035378	protein_coding	Shq1	ENSMUST00000089245	protein_coding		6	-1	100671139	1638
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000162979	processed_transcript		5	-1	131455862	462
ENSMUSG00000091568	protein_coding	Gm8206	ENSMUST00000171428	protein_coding		14	-1	6023405	997
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000129221	nonsense_mediated_decay		10	1	6788809	2205
ENSMUSG00000113645	lincRNA	Gm47076	ENSMUST00000221366	lincRNA		13	1	34119701	1529
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000147901	protein_coding		3	-1	84259369	476
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000198149	retained_intron		5	-1	131471383	1780
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000052751	protein_coding		10	1	6788809	1334
ENSMUSG00000107920	processed_pseudogene	Gm7783	ENSMUST00000204795	processed_pseudogene		6	-1	43856904	781
ENSMUSG00000106777	antisense	Gm43150	ENSMUST00000200931	antisense		5	-1	149428962	636
ENSMUSG00000059022	protein_coding	Kcp	ENSMUST00000078112	protein_coding		6	-1	29507952	4775
ENSMUSG00000091568	protein_coding	Gm8206	ENSMUST00000164139	protein_coding		14	-1	6038209	1956
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000159507	retained_intron		5	-1	131537970	2059
ENSMUSG00000035378	protein_coding	Shq1	ENSMUST00000162776	processed_transcript		6	-1	100671133	750
ENSMUSG00000036372	protein_coding	Tmem258	ENSMUST00000153854	processed_transcript		19	1	10204014	981
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000136651	retained_intron		3	-1	84220861	2357
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000140856	retained_intron		3	-1	84220874	2822
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000183153	processed_transcript		5	-1	131534397	859
ENSMUSG00000107598	lincRNA	Gm35216	ENSMUST00000203777	lincRNA		6	-1	44083355	433
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000105615	protein_coding		10	1	6758506	1258
ENSMUSG00000091568	protein_coding	Gm8206	ENSMUST00000168733	protein_coding	principal1	14	-1	6093942	516
ENSMUSG00000097137	antisense	Gm26627	ENSMUST00000181540	antisense		6	1	29507725	1487
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000198165	retained_intron		5	-1	131538005	3695
ENSMUSG00000107953	processed_pseudogene	Gm44211	ENSMUST00000204867	processed_pseudogene		6	-1	44667435	145
ENSMUSG00000051900	protein_coding	Abca16	ENSMUST00000120490	protein_coding	principal5	7	1	120421701	5088
ENSMUSG00000094181	protein_coding	Gm21739	ENSMUST00000188917	protein_coding	principal1	Y	-1	44264444	933
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000154152	protein_coding		3	-1	84220874	456
ENSMUSG00000094181	protein_coding	Gm21739	ENSMUST00000178639	protein_coding		Y	-1	44263016	498
ENSMUSG00000035378	protein_coding	Shq1	ENSMUST00000170667	protein_coding	principal1	6	-1	100671157	1990
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000154941	nonsense_mediated_decay		10	1	6788809	1540
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000161108	retained_intron		5	-1	132542404	3620
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000152953	processed_transcript		3	-1	84259369	655
ENSMUSG00000117742	TEC	4930415P13Rik	ENSMUST00000236411	TEC		18	-1	46340429	534
ENSMUSG00000091290	processed_pseudogene	Gm3275	ENSMUST00000169145	processed_pseudogene		14	1	6078696	487
ENSMUSG00000036372	protein_coding	Tmem258	ENSMUST00000127878	retained_intron		19	1	10204218	1026
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000196613	retained_intron		5	-1	132028626	3624
ENSMUSG00000107845	processed_pseudogene	Gm44212	ENSMUST00000205016	processed_pseudogene		6	1	44821571	897
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000129954	nonsense_mediated_decay		10	1	6788809	1706
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000136805	processed_transcript		3	-1	84304741	2103
ENSMUSG00000051900	protein_coding	Abca16	ENSMUST00000153845	retained_intron		7	1	120475422	2678
ENSMUSG00000107904	processed_pseudogene	Gm44213	ENSMUST00000204977	processed_pseudogene		6	1	44965923	703
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000100564	processed_transcript		5	-1	132542032	2800
ENSMUSG00000036372	protein_coding	Tmem258	ENSMUST00000166412	protein_coding		19	1	10206033	447
ENSMUSG00000031996	protein_coding	Aplp2	ENSMUST00000217641	protein_coding		9	-1	31211787	3462
ENSMUSG00000090685	protein_coding	Atp6v1fnb	ENSMUST00000171317	protein_coding	principal1	6	1	29471437	682
ENSMUSG00000051900	protein_coding	Abca16	ENSMUST00000056042	protein_coding	alternative2	7	1	120421701	5085
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000197845	processed_transcript		3	-1	84306877	2032
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000105601	nonsense_mediated_decay		10	1	6788694	1161
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000160135	protein_coding		5	-1	132449360	593
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000123861	nonsense_mediated_decay		10	1	6788809	1020
ENSMUSG00000118282	processed_pseudogene	Gm4840	ENSMUST00000237083	processed_pseudogene		18	-1	46356967	1810
ENSMUSG00000109326	processed_pseudogene	Gm9165	ENSMUST00000208467	processed_pseudogene		7	1	120504658	2044
ENSMUSG00000114816	processed_pseudogene	Gm10323	ENSMUST00000224898	processed_pseudogene		13	-1	66854871	3416
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000135502	protein_coding		10	1	6788809	1363
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000071591	retained_intron		5	-1	132542798	2177
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000178555	protein_coding		5	-1	132541823	309
ENSMUSG00000064032	antisense	Gm10143	ENSMUST00000150038	antisense		19	1	10198368	3332
ENSMUSG00000106584	TEC	4930502C17Rik	ENSMUST00000200282	TEC		3	1	33956200	948
ENSMUSG00000027993	protein_coding	Trim2	ENSMUST00000107693	protein_coding		3	-1	84220877	5755
ENSMUSG00000101833	unprocessed_pseudogene	Gm20791	ENSMUST00000187310	unprocessed_pseudogene		Y	-1	80682503	693
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000147171	nonsense_mediated_decay		10	1	6758506	1570
ENSMUSG00000091882	protein_coding	Gm6337	ENSMUST00000168088	protein_coding	principal5	14	-1	6058209	1758
ENSMUSG00000064032	antisense	Gm10143	ENSMUST00000081739	antisense		19	1	10199189	3194
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000187544	protein_coding		5	-1	131477024	3166
ENSMUSG00000091882	protein_coding	Gm6337	ENSMUST00000170613	protein_coding	alternative2	14	-1	6058267	997
ENSMUSG00000113142	processed_pseudogene	Gm18114	ENSMUST00000221780	processed_pseudogene		12	1	16155101	523
ENSMUSG00000044434	processed_pseudogene	Gm9791	ENSMUST00000060997	processed_pseudogene		3	-1	34005463	447
ENSMUSG00000029673	protein_coding	Auts2	ENSMUST00000185450	protein_coding		5	-1	132050409	144
ENSMUSG00000091882	protein_coding	Gm6337	ENSMUST00000177662	protein_coding	alternative2	14	-1	6058204	618
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000219606	lincRNA		10	-1	92164748	2891
ENSMUSG00000097199	unprocessed_pseudogene	Gm26991	ENSMUST00000180950	unprocessed_pseudogene		14	-1	6172001	620
ENSMUSG00000106386	TEC	Gm42991	ENSMUST00000196468	TEC		5	-1	131975886	3837
ENSMUSG00000105535	lincRNA	Gm43077	ENSMUST00000200602	lincRNA		3	-1	34019882	491
ENSMUSG00000094737	processed_pseudogene	Gm17045	ENSMUST00000178600	processed_pseudogene		14	1	6034967	844
ENSMUSG00000105624	TEC	Gm43187	ENSMUST00000200652	TEC		5	-1	132492739	2397
ENSMUSG00000031996	protein_coding	Aplp2	ENSMUST00000072634	protein_coding	principal1	9	-1	31211791	3634
ENSMUSG00000112772	processed_pseudogene	Gm48400	ENSMUST00000220033	processed_pseudogene		10	1	10730629	498
ENSMUSG00000105726	TEC	Gm42443	ENSMUST00000198084	TEC		5	-1	131695875	1155
ENSMUSG00000111921	processed_pseudogene	Gm48406	ENSMUST00000218933	processed_pseudogene		10	1	11035916	229
ENSMUSG00000106557	TEC	Gm42442	ENSMUST00000197951	TEC		5	-1	131698353	1133
ENSMUSG00000111313	processed_pseudogene	Gm18942	ENSMUST00000213578	processed_pseudogene		10	-1	18337241	1121
ENSMUSG00000106450	TEC	Gm43018	ENSMUST00000198075	TEC		5	-1	132440529	1275
ENSMUSG00000001911	protein_coding	Nfix	ENSMUST00000109764	protein_coding	principal4	8	-1	84773396	5476
ENSMUSG00000105495	TEC	Gm42995	ENSMUST00000197047	TEC		5	-1	132203168	1330
ENSMUSG00000050288	protein_coding	Fzd2	ENSMUST00000057893	protein_coding	principal1	11	1	102604396	3663
ENSMUSG00000106516	TEC	Gm42441	ENSMUST00000199778	TEC		5	-1	131906442	748
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000105607	protein_coding	principal2	10	1	6758593	2369
ENSMUSG00000046031	protein_coding	Calhm6	ENSMUST00000062784	protein_coding	principal1	10	-1	34127984	1094
ENSMUSG00000106320	TEC	Gm42992	ENSMUST00000197043	TEC		5	-1	131993384	6836
ENSMUSG00000079371	protein_coding	Gm3476	ENSMUST00000167913	protein_coding	principal5	14	-1	6125747	1759
ENSMUSG00000026694	protein_coding	Eef1aknmt	ENSMUST00000028017	protein_coding	principal1	1	-1	162548551	4541
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000152674	protein_coding		10	1	6788601	1179
ENSMUSG00000031996	protein_coding	Aplp2	ENSMUST00000079758	protein_coding		9	-1	31211793	3504
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000148625	processed_transcript		10	1	6789099	242
ENSMUSG00000086105	lincRNA	Gm11636	ENSMUST00000152172	lincRNA		11	-1	102616546	774
ENSMUSG00000079371	protein_coding	Gm3476	ENSMUST00000112742	protein_coding	alternative2	14	-1	6125807	853
ENSMUSG00000104987	antisense	2810432F15Rik	ENSMUST00000198632	antisense		5	1	131615438	657
ENSMUSG00000020650	protein_coding	Bcap29	ENSMUST00000177962	protein_coding	principal1	12	-1	31634635	6155
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000105597	nonsense_mediated_decay		10	1	6758593	1133
ENSMUSG00000079371	protein_coding	Gm3476	ENSMUST00000190582	protein_coding		14	-1	6125742	612
ENSMUSG00000045136	protein_coding	Tubb2b	ENSMUST00000075774	protein_coding	principal1	13	-1	34130354	2182
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000219444	lincRNA		10	-1	92165170	2679
ENSMUSG00000105289	TEC	Gm43483	ENSMUST00000196724	TEC		5	-1	131642807	2860
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000150374	nonsense_mediated_decay		10	1	6758593	1174
ENSMUSG00000096507	processed_pseudogene	Gm21772	ENSMUST00000169213	processed_pseudogene		14	1	6251403	478
ENSMUSG00000105500	TEC	Gm42591	ENSMUST00000197249	TEC		5	-1	131625541	700
ENSMUSG00000020650	protein_coding	Bcap29	ENSMUST00000218942	retained_intron		12	-1	31601749	2123
ENSMUSG00000104994	TEC	Gm42989	ENSMUST00000200646	TEC		5	-1	132372681	2306
ENSMUSG00000028048	protein_coding	Gba	ENSMUST00000077367	protein_coding	principal1	3	1	89202928	1779
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000219726	lincRNA		10	-1	92164666	783
ENSMUSG00000031996	protein_coding	Aplp2	ENSMUST00000216921	retained_intron		9	-1	31153645	1877
ENSMUSG00000045136	protein_coding	Tubb2b	ENSMUST00000220744	processed_transcript		13	-1	34130466	430
ENSMUSG00000106570	TEC	C230071H17Rik	ENSMUST00000196044	TEC		5	-1	131885938	2973
ENSMUSG00000021636	protein_coding	Marveld2	ENSMUST00000225754	protein_coding	principal1	13	-1	100616702	3111
ENSMUSG00000031996	protein_coding	Aplp2	ENSMUST00000214396	retained_intron		9	-1	31156563	634
ENSMUSG00000116655	lincRNA	Gm35455	ENSMUST00000231330	lincRNA		17	1	15152159	2165
ENSMUSG00000026694	protein_coding	Eef1aknmt	ENSMUST00000159817	nonsense_mediated_decay		1	-1	162548522	2482
ENSMUSG00000031996	protein_coding	Aplp2	ENSMUST00000213254	protein_coding		9	-1	31211815	1961
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000220288	lincRNA		10	-1	92165167	792
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000056385	protein_coding	principal2	10	1	6758593	1440
ENSMUSG00000026694	protein_coding	Eef1aknmt	ENSMUST00000176220	protein_coding		1	-1	162544362	718
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000092734	protein_coding	principal2	10	1	6758593	1569
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000217871	lincRNA		10	-1	92136292	699
ENSMUSG00000026694	protein_coding	Eef1aknmt	ENSMUST00000176689	processed_transcript		1	-1	162548256	510
ENSMUSG00000020650	protein_coding	Bcap29	ENSMUST00000020979	protein_coding	principal1	12	-1	31634599	1949
ENSMUSG00000031996	protein_coding	Aplp2	ENSMUST00000217658	retained_intron		9	-1	31161322	646
ENSMUSG00000021636	protein_coding	Marveld2	ENSMUST00000163163	protein_coding		13	-1	100616930	2187
ENSMUSG00000085912	lincRNA	Trp53cor1	ENSMUST00000133221	lincRNA		17	-1	29079179	3218
ENSMUSG00000085912	lincRNA	Trp53cor1	ENSMUST00000233478	lincRNA		17	-1	29072799	1437
ENSMUSG00000097624	lincRNA	Gm5091	ENSMUST00000231526	lincRNA		17	-1	15247917	1218
ENSMUSG00000031996	protein_coding	Aplp2	ENSMUST00000217516	retained_intron		9	-1	31167877	601
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000105605	protein_coding		10	1	6788809	1503
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000217866	lincRNA		10	-1	92163140	775
ENSMUSG00000026694	protein_coding	Eef1aknmt	ENSMUST00000159316	nonsense_mediated_decay		1	-1	162546527	776
ENSMUSG00000085912	lincRNA	Trp53cor1	ENSMUST00000232704	lincRNA		17	-1	29072905	1389
ENSMUSG00000028048	protein_coding	Gba	ENSMUST00000197738	nonsense_mediated_decay		3	1	89202936	1978
ENSMUSG00000085912	lincRNA	Trp53cor1	ENSMUST00000233135	lincRNA		17	-1	29072847	1433
ENSMUSG00000085912	lincRNA	Trp53cor1	ENSMUST00000232856	lincRNA		17	-1	29073799	1453
ENSMUSG00000097624	lincRNA	Gm5091	ENSMUST00000181658	lincRNA		17	-1	15240783	1179
ENSMUSG00000020650	protein_coding	Bcap29	ENSMUST00000218543	retained_intron		12	-1	31634658	360
ENSMUSG00000031996	protein_coding	Aplp2	ENSMUST00000214908	retained_intron		9	-1	31170574	636
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000154906	protein_coding		10	1	6788809	2039
ENSMUSG00000085912	lincRNA	Trp53cor1	ENSMUST00000233178	lincRNA		17	-1	29072790	1464
ENSMUSG00000031996	protein_coding	Aplp2	ENSMUST00000213273	retained_intron		9	-1	31211815	1155
ENSMUSG00000085912	lincRNA	Trp53cor1	ENSMUST00000233713	lincRNA		17	-1	29072342	985
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000220389	lincRNA		10	-1	92164971	633
ENSMUSG00000109469	unprocessed_pseudogene	Gm8486	ENSMUST00000207508	unprocessed_pseudogene		7	1	20618446	2171
ENSMUSG00000079396	protein_coding	Gm3411	ENSMUST00000170104	protein_coding	principal1	14	-1	6287250	1991
ENSMUSG00000117007	lincRNA	Gm41556	ENSMUST00000233185	lincRNA		17	1	29053336	1247
ENSMUSG00000026694	protein_coding	Eef1aknmt	ENSMUST00000159255	retained_intron		1	-1	162548538	4132
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000092729	nonsense_mediated_decay		10	1	6788809	1422
ENSMUSG00000021636	protein_coding	Marveld2	ENSMUST00000168772	protein_coding	principal1	13	-1	100616911	1888
ENSMUSG00000117007	lincRNA	Gm41556	ENSMUST00000233914	lincRNA		17	1	29054107	1101
ENSMUSG00000117007	lincRNA	Gm41556	ENSMUST00000232746	lincRNA		17	1	29054670	1148
ENSMUSG00000117007	lincRNA	Gm41556	ENSMUST00000233472	lincRNA		17	1	29054670	1162
ENSMUSG00000026694	protein_coding	Eef1aknmt	ENSMUST00000161760	retained_intron		1	-1	162548528	3317
ENSMUSG00000028048	protein_coding	Gba	ENSMUST00000167998	protein_coding	principal1	3	1	89202940	1938
ENSMUSG00000117007	lincRNA	Gm41556	ENSMUST00000233006	lincRNA		17	1	29056860	1125
ENSMUSG00000117007	lincRNA	Gm41556	ENSMUST00000233640	lincRNA		17	1	29057961	1398
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000218678	lincRNA		10	-1	92162761	168
ENSMUSG00000026694	protein_coding	Eef1aknmt	ENSMUST00000195027	retained_intron		1	-1	162548529	1702
ENSMUSG00000117007	lincRNA	Gm41556	ENSMUST00000233408	lincRNA		17	1	29058229	1060
ENSMUSG00000095275	protein_coding	Vmn1r107	ENSMUST00000179079	protein_coding	principal1	7	1	20668918	924
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000105604	protein_coding	alternative1	10	1	6788837	1616
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000218314	lincRNA		10	-1	92165170	2698
ENSMUSG00000092604	lincRNA	Gm20508	ENSMUST00000172480	lincRNA		17	1	35991867	487
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000092731	protein_coding		10	1	6788809	1332
ENSMUSG00000112117	lincRNA	Rmst	ENSMUST00000184175	misc_RNA		10	-1	92162164	60
ENSMUSG00000028048	protein_coding	Gba	ENSMUST00000200124	retained_intron		3	1	89205485	693
ENSMUSG00000063615	protein_coding	Olfr64	ENSMUST00000081748	protein_coding	principal1	7	-1	103894485	5001
ENSMUSG00000083787	processed_pseudogene	Gm11644	ENSMUST00000119735	processed_pseudogene		2	1	143349512	150
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000000783	protein_coding		10	1	6788809	1500
ENSMUSG00000028048	protein_coding	Gba	ENSMUST00000196887	retained_intron		3	1	89208217	662
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000078634	protein_coding		10	1	6788809	1695
ENSMUSG00000021636	protein_coding	Marveld2	ENSMUST00000022137	protein_coding	principal1	13	-1	100616971	3061
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000105603	protein_coding		10	1	6788837	2053
ENSMUSG00000004630	protein_coding	Pcp2	ENSMUST00000136105	protein_coding		8	-1	3625545	504
ENSMUSG00000085928	lincRNA	4933427I22Rik	ENSMUST00000153921	lincRNA		4	-1	139943519	1378
ENSMUSG00000103194	TEC	Gm37643	ENSMUST00000195369	TEC		18	1	65603834	1260
ENSMUSG00000109395	TEC	Gm45199	ENSMUST00000207640	TEC		7	1	92706773	1507
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000105602	protein_coding		10	1	6788809	1366
ENSMUSG00000029659	protein_coding	Medag	ENSMUST00000093110	protein_coding	principal1	5	1	149411749	2953
ENSMUSG00000110259	protein_coding	Olfr65	ENSMUST00000214300	protein_coding	alternative1	7	1	103903635	2855
ENSMUSG00000086283	lincRNA	2810433D01Rik	ENSMUST00000154798	lincRNA		11	-1	102624416	1045
ENSMUSG00000004630	protein_coding	Pcp2	ENSMUST00000145855	retained_intron		8	-1	3625545	1606
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000143875	nonsense_mediated_decay		10	1	6758593	696
ENSMUSG00000085928	lincRNA	4933427I22Rik	ENSMUST00000138672	lincRNA		4	-1	139933074	393
ENSMUSG00000110259	protein_coding	Olfr65	ENSMUST00000106864	protein_coding	alternative1	7	1	103903487	2648
ENSMUSG00000117992	antisense	Gm41760	ENSMUST00000236474	antisense		18	-1	65580744	2393
ENSMUSG00000086283	lincRNA	2810433D01Rik	ENSMUST00000147541	lincRNA		11	-1	102624366	490
ENSMUSG00000087628	lincRNA	Gm13028	ENSMUST00000128563	lincRNA		4	1	139923349	277
ENSMUSG00000029659	protein_coding	Medag	ENSMUST00000201588	retained_intron		5	1	149411772	1353
ENSMUSG00000000766	protein_coding	Oprm1	ENSMUST00000133486	processed_transcript		10	1	6789025	256
ENSMUSG00000110259	protein_coding	Olfr65	ENSMUST00000209528	protein_coding	principal2	7	1	103906342	1106
ENSMUSG00000107344	processed_pseudogene	Gm2559	ENSMUST00000201323	processed_pseudogene		15	-1	12031927	363
ENSMUSG00000080992	processed_pseudogene	Psmb5-ps	ENSMUST00000119744	processed_pseudogene		11	-1	102659925	798
ENSMUSG00000086448	bidirectional_promoter_lncRNA	9330162012Rik	ENSMUST00000154919	bidirectional_promoter_lncRNA		13	1	24937401	3836
ENSMUSG00000115441	lincRNA	Gm34759	ENSMUST00000227908	lincRNA		15	-1	12085197	2787
ENSMUSG00000029659	protein_coding	Medag	ENSMUST00000201083	protein_coding		5	1	149413840	2669
ENSMUSG00000107152	TEC	Gm43152	ENSMUST00000202495	TEC		5	1	149399490	1638
ENSMUSG00000042219	protein_coding	Olfr631	ENSMUST00000106863	protein_coding	principal1	7	1	103928825	960
ENSMUSG00000001911	protein_coding	Nfix	ENSMUST00000076715	protein_coding		8	-1	84800140	1403
ENSMUSG00000030138	protein_coding	Bms1	ENSMUST00000032237	protein_coding	principal1	6	-1	118419474	4345
ENSMUSG00000101413	processed_pseudogene	Gm29485	ENSMUST00000190220	processed_pseudogene		1	1	136523884	282
ENSMUSG00000017765	protein_coding	Slc12a4	ENSMUST00000116429	protein_coding	principal3	8	-1	105966044	3755
ENSMUSG00000099337	processed_pseudogene	Gm29486	ENSMUST00000088648	processed_pseudogene		1	1	136507409	372
ENSMUSG00000078234	protein_coding	Klhdc7a	ENSMUST00000105031	protein_coding	principal1	4	-1	139968026	7807
ENSMUSG00000059482	protein_coding	2610301B20Rik	ENSMUST00000131437	processed_transcript		4	1	10874525	677
ENSMUSG00000059482	protein_coding	2610301B20Rik	ENSMUST00000156124	processed_transcript		4	1	10874565	625
ENSMUSG00000107314	processed_transcript	Gm20488	ENSMUST00000201641	processed_transcript		5	1	149368476	2996
ENSMUSG00000073938	protein_coding	Olfr632	ENSMUST00000214711	protein_coding	principal1	7	1	103934347	3282
ENSMUSG00000025488	protein_coding	Cox8b	ENSMUST00000026561	protein_coding	principal1	7	-1	140900446	360
ENSMUSG00000073938	protein_coding	Olfr632	ENSMUST00000214509	processed_transcript		7	1	103934347	2704
ENSMUSG00000001911	protein_coding	Nfix	ENSMUST00000099070	protein_coding	alternative1	8	-1	84800344	1728
ENSMUSG00000073938	protein_coding	Olfr632	ENSMUST00000098189	protein_coding	principal1	7	1	103937382	954
ENSMUSG00000039835	protein_coding	Nhsl1	ENSMUST00000207038	protein_coding	alternative2	10	1	18318985	4854
ENSMUSG00000030138	protein_coding	Bms1	ENSMUST00000205207	retained_intron		6	-1	118419404	3071
ENSMUSG00000109837	unprocessed_pseudogene	Gm45655	ENSMUST00000211625	unprocessed_pseudogene		7	1	103939754	160
ENSMUSG00000070331	protein_coding	Qrich2	ENSMUST00000134182	retained_intron		11	-1	116454347	2162
ENSMUSG00000030138	protein_coding	Bms1	ENSMUST00000203444	processed_transcript		6	-1	118419412	420
ENSMUSG00000001911	protein_coding	Nfix	ENSMUST00000109762	protein_coding		8	-1	84774369	2261
ENSMUSG00000004630	protein_coding	Pcp2	ENSMUST00000142431	protein_coding		8	-1	3625002	524
ENSMUSG00000001911	protein_coding	Nfix	ENSMUST00000132236	retained_intron		8	-1	84714068	347
ENSMUSG00000017765	protein_coding	Slc12a4	ENSMUST00000034370	protein_coding	alternative1	8	-1	105966097	3811
ENSMUSG00000004630	protein_coding	Pcp2	ENSMUST00000133459	protein_coding	principal1	8	-1	3625049	470
ENSMUSG00000001911	protein_coding	Nfix	ENSMUST00000126806	protein_coding		8	-1	84800024	1465
ENSMUSG00000017765	protein_coding	Slc12a4	ENSMUST00000141326	retained_intron		8	-1	105948173	715
ENSMUSG00000017765	protein_coding	Slc12a4	ENSMUST00000132231	protein_coding		8	-1	105964420	512
ENSMUSG00000034041	protein_coding	Lyl1	ENSMUST00000238364	protein_coding		8	1	84701449	743
ENSMUSG00000107271	lincRNA	BC028471	ENSMUST00000202022	lincRNA		5	1	149367636	4113
ENSMUSG00000059482	protein_coding	2610301B20Rik	ENSMUST00000101504	protein_coding	alternative2	4	1	10874568	2053
ENSMUSG00000039835	protein_coding	Nhsl1	ENSMUST00000159299	processed_transcript		10	1	18390322	1159
ENSMUSG00000059482	protein_coding	2610301B20Rik	ENSMUST00000142026	processed_transcript		4	1	10879539	363
ENSMUSG00000017765	protein_coding	Slc12a4	ENSMUST00000143381	retained_intron		8	-1	105966074	461
ENSMUSG00000004630	protein_coding	Pcp2	ENSMUST00000004749	protein_coding		8	-1	3625282	495
ENSMUSG00000041498	protein_coding	Kif14	ENSMUST00000187963	retained_intron		1	1	136466343	4102
ENSMUSG00000034345	protein_coding	Gtf2h5	ENSMUST00000039487	protein_coding	principal1	17	1	6079786	2245
ENSMUSG00000039835	protein_coding	Nhsl1	ENSMUST00000161510	processed_transcript		10	1	18407638	2292
ENSMUSG00000059482	protein_coding	2610301B20Rik	ENSMUST00000080517	protein_coding	principal2	4	1	10874498	2116
ENSMUSG00000004630	protein_coding	Pcp2	ENSMUST00000128566	protein_coding		8	-1	3625545	1447
ENSMUSG00000107271	lincRNA	BC028471	ENSMUST00000200937	lincRNA		5	1	149369046	520
ENSMUSG00000039835	protein_coding	Nhsl1	ENSMUST00000160602	retained_intron		10	1	18407675	2079
ENSMUSG00000107271	lincRNA	BC028471	ENSMUST00000202654	lincRNA		5	1	149369048	1240
ENSMUSG00000004630	protein_coding	Pcp2	ENSMUST00000144977	protein_coding		8	-1	3625525	534
ENSMUSG00000107271	lincRNA	BC028471	ENSMUST00000201444	lincRNA		5	1	149369263	649
ENSMUSG00000116815	processed_pseudogene	Gm49760	ENSMUST00000232086	processed_pseudogene		12	1	18648214	1785
ENSMUSG00000107271	lincRNA	BC028471	ENSMUST00000202485	lincRNA		5	1	149376700	275
ENSMUSG00000041498	protein_coding	Kif14	ENSMUST00000201676	nonsense_mediated_decay		1	1	136467935	4990
ENSMUSG00000102772	lincRNA	Gm32114	ENSMUST00000195759	lincRNA		Y	-1	22112998	1499
ENSMUSG00000034345	protein_coding	Gtf2h5	ENSMUST00000146035	retained_intron		17	1	6079837	1613
ENSMUSG00000107271	lincRNA	BC028471	ENSMUST00000202340	lincRNA		5	1	149376712	480
ENSMUSG00000034345	protein_coding	Gtf2h5	ENSMUST00000100955	protein_coding	principal1	17	1	6079930	879
ENSMUSG00000117516	processed_pseudogene	Gm18089	ENSMUST00000234907	processed_pseudogene		18	1	27008674	655
ENSMUSG00000106750	antisense	Gm43151	ENSMUST00000201093	antisense		5	-1	149425099	657
ENSMUSG00000034041	protein_coding	Lyl1	ENSMUST00000238562	protein_coding	alternative2	8	1	84701482	1922
ENSMUSG00000039835	protein_coding	Nhsl1	ENSMUST00000037341	protein_coding	principal3	10	1	18407675	7321
ENSMUSG00000053835	protein_coding	H2-T24	ENSMUST00000113760	protein_coding	principal1	17	-1	36020560	2182
ENSMUSG00000102772	lincRNA	Gm32114	ENSMUST00000193992	lincRNA		Y	-1	22112545	438
ENSMUSG00000102772	lincRNA	Gm32114	ENSMUST00000195056	lincRNA		Y	-1	22112545	622
ENSMUSG00000023247	protein_coding	Guca2a	ENSMUST00000024015	protein_coding	principal1	4	1	119637704	594
ENSMUSG00000073559	processed_pseudogene	Gm8618	ENSMUST00000097570	processed_pseudogene		1	1	134109368	432
ENSMUSG00000103425	lincRNA	Gm37075	ENSMUST00000191888	lincRNA		Y	1	22145145	2166
ENSMUSG00000039835	protein_coding	Nhsl1	ENSMUST00000160547	retained_intron		10	1	18469888	787
ENSMUSG00000053835	protein_coding	H2-T24	ENSMUST00000174063	protein_coding		17	-1	36020525	884
ENSMUSG00000039835	protein_coding	Nhsl1	ENSMUST00000160600	processed_transcript		10	1	18469968	319
ENSMUSG00000102486	unprocessed_pseudogene	Gm37921	ENSMUST00000194333	unprocessed_pseudogene		Y	1	22154579	695
ENSMUSG00000070331	protein_coding	Qrich2	ENSMUST00000208602	protein_coding	alternative2	11	-1	116466241	7260
ENSMUSG00000103250	unprocessed_pseudogene	Gm32180	ENSMUST00000192415	unprocessed_pseudogene		Y	1	22191469	615
ENSMUSG00000031897	protein_coding	Psmb10	ENSMUST00000212332	processed_transcript		8	-1	105937025	426
ENSMUSG00000035936	protein_coding	Aldh5a1	ENSMUST00000037615	protein_coding	principal1	13	-1	24937661	5647
ENSMUSG00000070331	protein_coding	Qrich2	ENSMUST00000140697	retained_intron		11	-1	116446991	797
ENSMUSG00000081715	processed_pseudogene	Rps11-ps3	ENSMUST00000117608	processed_pseudogene		4	1	10946608	486
ENSMUSG00000022831	protein_coding	Hcls1	ENSMUST00000023531	protein_coding	principal1	16	1	36934983	2016
ENSMUSG00000034041	protein_coding	Lyl1	ENSMUST00000037165	protein_coding	principal2	8	1	84701544	1714
ENSMUSG00000031897	protein_coding	Psmb10	ENSMUST00000212686	retained_intron		8	-1	105937038	554
ENSMUSG00000070331	protein_coding	Qrich2	ENSMUST00000093909	protein_coding	principal2	11	-1	116454347	2156
ENSMUSG00000051455	protein_coding	Meioc	ENSMUST00000100378	protein_coding	principal1	11	1	102665588	4573
ENSMUSG00000086796	antisense	4932702P03Rik	ENSMUST00000151220	antisense		13	1	24905593	2792
ENSMUSG00000039835	protein_coding	Nhsl1	ENSMUST00000162891	protein_coding		10	1	18469981	2957
ENSMUSG00000034041	protein_coding	Lyl1	ENSMUST00000238338	protein_coding		8	1	84701781	644
ENSMUSG00000056116	protein_coding	H2-T22	ENSMUST00000172633	retained_intron		17	-1	36042500	3062
ENSMUSG00000024425	protein_coding	Ndfip1	ENSMUST00000236052	protein_coding	alternative2	18	1	38410396	1723
ENSMUSG00000022831	protein_coding	Hcls1	ENSMUST00000164050	nonsense_mediated_decay		16	1	36937287	945
ENSMUSG00000039835	protein_coding	Nhsl1	ENSMUST00000100054	protein_coding	alternative2	10	1	18469981	6795
ENSMUSG00000086796	antisense	4932702P03Rik	ENSMUST00000138447	antisense		13	1	24905596	1482
ENSMUSG00000051455	protein_coding	Meioc	ENSMUST00000155813	processed_transcript		11	1	102665623	647
ENSMUSG00000086796	antisense	4932702P03Rik	ENSMUST00000225028	antisense		13	1	24905620	670
ENSMUSG00000022831	protein_coding	Hcls1	ENSMUST00000163755	retained_intron		16	1	36954751	739
ENSMUSG00000074203	protein_coding	G430095P16Rik	ENSMUST00000098571	protein_coding	principal1	8	1	84723007	721
ENSMUSG00000051455	protein_coding	Meioc	ENSMUST00000156590	protein_coding		11	1	102663716	1726
ENSMUSG00000046178	protein_coding	Nxph1	ENSMUST00000162942	processed_transcript		6	1	8948431	2337
ENSMUSG00000107110	lincRNA	Gm42931	ENSMUST00000201009	lincRNA		6	-1	35615669	760
ENSMUSG00000101688	unprocessed_pseudogene	Gm20841	ENSMUST00000190209	unprocessed_pseudogene		Y	-1	80757034	696
ENSMUSG00000092487	unprocessed_pseudogene	Vmn1r-ps71	ENSMUST00000172648	unprocessed_pseudogene		7	-1	20681337	924
ENSMUSG00000046178	protein_coding	Nxph1	ENSMUST00000160300	protein_coding	principal1	6	1	8948614	2815
ENSMUSG00000024425	protein_coding	Ndfip1	ENSMUST00000236085	protein_coding	principal2	18	1	38418907	1796
ENSMUSG00000113586	lincRNA	Gm48606	ENSMUST00000222537	lincRNA		12	1	16207733	906
ENSMUSG00000113975	lincRNA	Gm36372	ENSMUST00000221011	lincRNA		12	-1	16221279	778
ENSMUSG00000024425	protein_coding	Ndfip1	ENSMUST00000236803	retained_intron		18	1	38418942	729
ENSMUSG00000113892	lincRNA	Gm48605	ENSMUST00000220475	lincRNA		12	-1	16232227	879
ENSMUSG00000046178	protein_coding	Nxph1	ENSMUST00000060369	protein_coding	principal1	6	1	8949676	2578
ENSMUSG00000113735	lincRNA	Gm48607	ENSMUST00000222199	lincRNA		12	1	16185773	908
ENSMUSG00000113735	lincRNA	Gm48607	ENSMUST00000222326	lincRNA		12	1	16185779	683
ENSMUSG00000024425	protein_coding	Ndfip1	ENSMUST00000025293	protein_coding	principal2	18	1	38418969	1392
ENSMUSG00000113735	lincRNA	Gm48607	ENSMUST00000222070	lincRNA		12	1	16185793	719
ENSMUSG00000107851	processed_pseudogene	Gm35736	ENSMUST00000203681	processed_pseudogene		6	1	9146766	313
ENSMUSG00000113735	lincRNA	Gm48607	ENSMUST00000222189	lincRNA		12	1	16186388	1128
ENSMUSG00000113735	lincRNA	Gm48607	ENSMUST00000221064	lincRNA		12	1	16186900	1097
ENSMUSG00000024425	protein_coding	Ndfip1	ENSMUST00000235458	retained_intron		18	1	38418984	817
ENSMUSG00000099679	unprocessed_pseudogene	Gm28899	ENSMUST00000191161	unprocessed_pseudogene		Y	-1	80786575	615
ENSMUSG00000020185	protein_coding	E2f7	ENSMUST00000173294	processed_transcript		10	1	110745439	438
ENSMUSG00000109628	processed_transcript	BC024386	ENSMUST00000210080	lincRNA		7	1	140906014	731
ENSMUSG00000109628	processed_transcript	BC024386	ENSMUST00000209817	lincRNA		7	1	140906021	825
ENSMUSG00000099677	unprocessed_pseudogene	Gm21722	ENSMUST00000190153	unprocessed_pseudogene		Y	-1	80823453	696
ENSMUSG00000103077	lincRNA	Gm38371	ENSMUST00000193996	lincRNA		Y	-1	22406098	1498
ENSMUSG00000024425	protein_coding	Ndfip1	ENSMUST00000236480	nonsense_mediated_decay		18	1	38418984	838
ENSMUSG00000031897	protein_coding	Psmb10	ENSMUST00000034369	protein_coding	principal1	8	-1	105938444	1311
ENSMUSG00000100925	lincRNA	Gm28898	ENSMUST00000189604	lincRNA		Y	-1	80832885	2167
ENSMUSG00000103077	lincRNA	Gm38371	ENSMUST00000192472	lincRNA		Y	-1	22405644	440
ENSMUSG00000031897	protein_coding	Psmb10	ENSMUST00000212938	retained_intron		8	-1	105937027	646
ENSMUSG00000024425	protein_coding	Ndfip1	ENSMUST00000236171	protein_coding		18	1	38447713	1237
ENSMUSG00000031897	protein_coding	Psmb10	ENSMUST00000212876	retained_intron		8	-1	105937665	969
ENSMUSG00000109628	processed_transcript	BC024386	ENSMUST00000209842	lincRNA		7	1	140906042	688
ENSMUSG00000024425	protein_coding	Ndfip1	ENSMUST00000238135	retained_intron		18	1	38451310	4364
ENSMUSG00000109628	processed_transcript	BC024386	ENSMUST00000210567	retained_intron		7	1	140906048	1593
ENSMUSG00000117986	processed_pseudogene	Gm50344	ENSMUST00000235696	processed_pseudogene		18	-1	38413284	379
ENSMUSG00000109628	processed_transcript	BC024386	ENSMUST00000209406	retained_intron		7	1	140906064	1626
ENSMUSG00000019143	protein_coding	Hars2	ENSMUST00000134122	processed_transcript		18	1	36783008	896
ENSMUSG00000109628	processed_transcript	BC024386	ENSMUST00000209496	lincRNA		7	1	140906083	851
ENSMUSG00000031897	protein_coding	Psmb10	ENSMUST00000212595	retained_intron		8	-1	105938104	898
ENSMUSG00000031897	protein_coding	Psmb10	ENSMUST00000212044	retained_intron		8	-1	105938092	788
ENSMUSG00000117050	TEC	1700023B13Rik	ENSMUST00000233069	TEC		17	-1	29094461	1046
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000132772	processed_transcript		11	1	93996091	611
ENSMUSG00000023067	protein_coding	Cdkn1a	ENSMUST00000232979	processed_transcript		17	1	29090976	958
ENSMUSG00000020185	protein_coding	E2f7	ENSMUST00000174857	protein_coding		10	1	110745465	2865
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000132605	processed_transcript		11	1	93996103	3000
ENSMUSG00000049969	protein_coding	Plekhf2	ENSMUST00000054776	protein_coding	principal1	4	-1	11007676	2977
ENSMUSG00000030111	protein_coding	A2m	ENSMUST00000204850	protein_coding		6	1	121635376	433
ENSMUSG00000030232	protein_coding	Aebp2	ENSMUST00000032359	protein_coding	alternative2	6	1	140622663	5932
ENSMUSG00000025359	protein_coding	Pmel	ENSMUST00000217836	protein_coding		10	1	128704195	651
ENSMUSG00000049969	protein_coding	Plekhf2	ENSMUST00000137891	protein_coding		4	-1	11007927	668
ENSMUSG00000025359	protein_coding	Pmel	ENSMUST00000219157	protein_coding		10	1	128705180	622
ENSMUSG00000103787	lincRNA	Gm37657	ENSMUST00000195425	lincRNA		Y	1	22438028	2169
ENSMUSG00000020185	protein_coding	E2f7	ENSMUST00000174810	retained_intron		10	1	110745468	2226
ENSMUSG00000103987	unprocessed_pseudogene	Gm37448	ENSMUST00000192795	unprocessed_pseudogene		Y	1	22447275	697
ENSMUSG00000105565	sense_intronic	Gm43566	ENSMUST00000196851	sense_intronic		5	-1	23675546	808
ENSMUSG00000103063	unprocessed_pseudogene	Gm33163	ENSMUST00000194504	unprocessed_pseudogene		Y	1	22484124	614
ENSMUSG00000107459	processed_pseudogene	Gm5110	ENSMUST00000203122	processed_pseudogene		6	-1	10172854	1063
ENSMUSG00000102957	unprocessed_pseudogene	Gm21065	ENSMUST00000191793	unprocessed_pseudogene		Y	1	22513860	696
ENSMUSG00000107762	processed_pseudogene	Gm18421	ENSMUST00000204122	processed_pseudogene		6	1	10334296	625
ENSMUSG00000029186	protein_coding	Pi4k2b	ENSMUST00000031081	protein_coding	principal3	5	1	52741574	3139
ENSMUSG00000103269	unprocessed_pseudogene	Gm36978	ENSMUST00000195734	unprocessed_pseudogene		Y	1	22588411	696
ENSMUSG00000023067	protein_coding	Cdkn1a	ENSMUST00000119901	protein_coding	principal1	17	1	29090979	922
ENSMUSG00000108222	processed_pseudogene	Gm2691	ENSMUST00000203205	processed_pseudogene		6	-1	10775014	901
ENSMUSG00000027660	protein_coding	Skil	ENSMUST00000118470	protein_coding	alternative2	3	1	31095058	6578
ENSMUSG00000029186	protein_coding	Pi4k2b	ENSMUST00000131526	nonsense_mediated_decay		5	1	52741606	656
ENSMUSG00000108249	processed_pseudogene	Gm43960	ENSMUST00000204249	processed_pseudogene		6	1	10804828	5020
ENSMUSG00000063445	protein_coding	Nmral1	ENSMUST00000120056	protein_coding	principal1	16	-1	4719109	2440
ENSMUSG00000041498	protein_coding	Kif14	ENSMUST00000189413	protein_coding	principal2	1	1	136467935	8943
ENSMUSG00000063445	protein_coding	Nmral1	ENSMUST00000115851	protein_coding		16	-1	4719156	1306
ENSMUSG00000027660	protein_coding	Skil	ENSMUST00000144756	retained_intron		3	1	31095061	4788
ENSMUSG00000103954	lincRNA	Gm37721	ENSMUST00000194673	lincRNA		Y	-1	22699679	1498
ENSMUSG00000023067	protein_coding	Cdkn1a	ENSMUST00000023829	protein_coding	principal1	17	1	29093769	1913
ENSMUSG00000033444	protein_coding	Specc1l	ENSMUST00000218766	protein_coding	principal1	10	1	75212073	4725
ENSMUSG00000041498	protein_coding	Kif14	ENSMUST00000201158	retained_intron		1	1	136469003	574
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000173704	protein_coding	principal1	13	1	44730774	4135
ENSMUSG00000023067	protein_coding	Cdkn1a	ENSMUST00000233296	protein_coding	principal1	17	1	29093781	2080
ENSMUSG00000027660	protein_coding	Skil	ENSMUST00000123532	protein_coding		3	1	31095065	716
ENSMUSG00000041498	protein_coding	Kif14	ENSMUST00000195390	processed_transcript		1	1	136476340	280
ENSMUSG00000041498	protein_coding	Kif14	ENSMUST00000193587	processed_transcript		1	1	136476340	238
ENSMUSG00000041498	protein_coding	Kif14	ENSMUST00000195274	protein_coding		1	1	136476340	207
ENSMUSG00000033444	protein_coding	Specc1l	ENSMUST00000218876	retained_intron		10	1	75212095	3167
ENSMUSG00000023067	protein_coding	Cdkn1a	ENSMUST00000122348	protein_coding	principal1	17	1	29097900	1172
ENSMUSG00000025359	protein_coding	Pmel	ENSMUST00000054125	protein_coding	principal1	10	1	128706258	2130
ENSMUSG00000103954	lincRNA	Gm37721	ENSMUST00000195281	lincRNA		Y	-1	22699226	437
ENSMUSG00000027660	protein_coding	Skil	ENSMUST00000117728	protein_coding	alternative2	3	1	31095125	2899
ENSMUSG00000041498	protein_coding	Kif14	ENSMUST00000047817	protein_coding	alternative2	1	1	136467958	8770
ENSMUSG00000103954	lincRNA	Gm37721	ENSMUST00000192444	lincRNA		Y	-1	22699226	621
ENSMUSG00000063445	protein_coding	Nmral1	ENSMUST00000079130	protein_coding		16	-1	4719356	1459
ENSMUSG00000029186	protein_coding	Pi4k2b	ENSMUST00000031082	protein_coding	alternative2	5	1	52741610	3034
ENSMUSG00000029186	protein_coding	Pi4k2b	ENSMUST00000145825	retained_intron		5	1	52754602	721
ENSMUSG00000063445	protein_coding	Nmral1	ENSMUST00000074970	protein_coding		16	-1	4719112	1155
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000044608	protein_coding	principal1	13	1	44730823	5019
ENSMUSG00000033444	protein_coding	Specc1l	ENSMUST00000105421	protein_coding		10	1	75212390	6632
ENSMUSG00000063445	protein_coding	Nmral1	ENSMUST00000124977	retained_intron		16	-1	4719088	989
ENSMUSG00000030232	protein_coding	Aebp2	ENSMUST00000087614	protein_coding	principal4	6	1	140623499	3727
ENSMUSG00000033444	protein_coding	Specc1l	ENSMUST00000219387	protein_coding		10	1	75212420	469
ENSMUSG00000027660	protein_coding	Skil	ENSMUST00000118204	protein_coding	principal3	3	1	31096833	2904
ENSMUSG00000041420	protein_coding	Meis3	ENSMUST00000176342	protein_coding		7	1	16175090	659
ENSMUSG00000063445	protein_coding	Nmral1	ENSMUST00000125140	retained_intron		16	-1	4719104	921
ENSMUSG00000033444	protein_coding	Specc1l	ENSMUST00000219430	retained_intron		10	1	75260967	3943
ENSMUSG00000027660	protein_coding	Skil	ENSMUST00000029194	protein_coding	principal3	3	1	31095061	6717
ENSMUSG00000033444	protein_coding	Specc1l	ENSMUST00000218644	processed_transcript		10	1	75303620	737
ENSMUSG00000000378	protein_coding	Ccm2	ENSMUST00000000388	protein_coding	principal3	11	1	6546887	1858
ENSMUSG00000116851	lincRNA	Gm35576	ENSMUST00000232255	lincRNA		17	-1	15285358	7529
ENSMUSG00000116647	processed_pseudogene	Gm7423	ENSMUST00000232519	processed_pseudogene		17	-1	15321882	451
ENSMUSG00000033444	protein_coding	Specc1l	ENSMUST00000040105	protein_coding		10	1	75229855	5928
ENSMUSG00000049723	protein_coding	Mmp12	ENSMUST00000150167	protein_coding		9	1	7344381	362
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000173367	protein_coding		13	1	44730838	1775
ENSMUSG00000000378	protein_coding	Ccm2	ENSMUST00000159007	protein_coding		11	1	6546910	431
ENSMUSG00000112116	processed_pseudogene	Gm46234	ENSMUST00000218702	processed_pseudogene		10	-1	75283035	259
ENSMUSG00000071294	processed_pseudogene	Cbx3-ps4	ENSMUST00000091531	processed_pseudogene		13	1	66864524	549
ENSMUSG00000000378	protein_coding	Ccm2	ENSMUST00000109722	protein_coding	alternative2	11	1	6560183	1760
ENSMUSG00000000378	protein_coding	Ccm2	ENSMUST00000161501	nonsense_mediated_decay		11	1	6561112	691
ENSMUSG00000006542	protein_coding	Prkag3	ENSMUST00000160732	nonsense_mediated_decay		1	-1	74748955	2832
ENSMUSG00000066027	protein_coding	Gm10436	ENSMUST00000222081	protein_coding		12	-1	88181820	2453
ENSMUSG00000000378	protein_coding	Ccm2	ENSMUST00000144293	processed_transcript		11	1	6561121	1182
ENSMUSG00000000378	protein_coding	Ccm2	ENSMUST00000160633	protein_coding		11	1	6561134	827
ENSMUSG00000000378	protein_coding	Ccm2	ENSMUST00000161667	retained_intron		11	1	6593048	815
ENSMUSG00000066027	protein_coding	Gm10436	ENSMUST00000222556	protein_coding		12	-1	88181819	1382
ENSMUSG00000006542	protein_coding	Prkag3	ENSMUST00000113672	protein_coding		1	-1	74748577	2003
ENSMUSG00000000378	protein_coding	Ccm2	ENSMUST00000109721	protein_coding	alternative2	11	1	6561230	1551
ENSMUSG00000066027	protein_coding	Gm10436	ENSMUST00000220521	protein_coding	alternative2	12	-1	88182108	1788
ENSMUSG00000020783	protein_coding	Ncbp3	ENSMUST00000021135	protein_coding	principal1	11	1	73047783	12106
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000172708	processed_transcript		13	1	44730859	469
ENSMUSG00000006542	protein_coding	Prkag3	ENSMUST00000081636	protein_coding	principal1	1	-1	74749221	2341
ENSMUSG00000029179	protein_coding	Zcchc4	ENSMUST00000113901	processed_transcript		5	1	52775409	1554
ENSMUSG00000030232	protein_coding	Aebp2	ENSMUST00000095350	protein_coding	alternative2	6	1	140623689	2575
ENSMUSG00000006542	protein_coding	Prkag3	ENSMUST00000162093	nonsense_mediated_decay		1	-1	74748867	1177
ENSMUSG00000020783	protein_coding	Ncbp3	ENSMUST00000144262	retained_intron		11	1	73047870	2443
ENSMUSG00000006542	protein_coding	Prkag3	ENSMUST00000159728	nonsense_mediated_decay		1	-1	74748904	517
ENSMUSG00000066027	protein_coding	Gm10436	ENSMUST00000071580	protein_coding	principal2	12	-1	88181894	1883
ENSMUSG00000006542	protein_coding	Prkag3	ENSMUST00000188073	protein_coding	principal1	1	-1	74748955	2832
ENSMUSG00000020783	protein_coding	Ncbp3	ENSMUST00000151823	retained_intron		11	1	73047873	3591
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000173246	protein_coding	principal1	13	1	44731271	5997
ENSMUSG00000070111	TEC	Gm10286	ENSMUST00000212865	TEC		8	-1	94969754	5076
ENSMUSG00000066027	protein_coding	Gm10436	ENSMUST00000222391	nonsense_mediated_decay		12	-1	88181804	641
ENSMUSG00000070111	TEC	Gm10286	ENSMUST00000093603	pseudogene		8	-1	94969756	5077
ENSMUSG00000019828	protein_coding	Grm1	ENSMUST00000105561	protein_coding	principal1	10	-1	11082305	4435
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000174086	protein_coding		13	1	44731287	344
ENSMUSG00000041420	protein_coding	Meis3	ENSMUST00000177540	protein_coding		7	1	16175139	659
ENSMUSG00000104688	processed_pseudogene	Gm18702	ENSMUST00000196923	processed_pseudogene		5	1	103273909	588
ENSMUSG00000066027	protein_coding	Gm10436	ENSMUST00000221884	nonsense_mediated_decay		12	-1	88181774	618
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000174557	retained_intron		13	1	44731368	1322
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000135930	protein_coding	alternative1	5	-1	67847370	8069
ENSMUSG00000066027	protein_coding	Gm10436	ENSMUST00000223172	nonsense_mediated_decay		12	-1	88181796	768
ENSMUSG00000048424	protein_coding	Ranbp3l	ENSMUST00000229662	processed_transcript		15	1	8967949	648
ENSMUSG00000104956	lincRNA	4930429D17Rik	ENSMUST00000198193	lincRNA		5	-1	103299029	1624
ENSMUSG00000030232	protein_coding	Aebp2	ENSMUST00000160836	protein_coding	alternative2	6	1	140624909	1393
ENSMUSG00000109458	lincRNA	Gm44889	ENSMUST00000208346	lincRNA		7	1	68384779	1589
ENSMUSG00000109458	lincRNA	Gm44889	ENSMUST00000208160	lincRNA		7	1	68385046	807
ENSMUSG00000109458	lincRNA	Gm44889	ENSMUST00000207674	lincRNA		7	1	68385046	1019
ENSMUSG00000030232	protein_coding	Aebp2	ENSMUST00000161335	protein_coding	alternative2	6	1	140626882	2524
ENSMUSG00000104808	TEC	Gm42619	ENSMUST00000197564	TEC		5	1	103343972	1136
ENSMUSG00000030232	protein_coding	Aebp2	ENSMUST00000204724	retained_intron		6	1	140636738	1431
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000174683	retained_intron		13	1	44731370	8353
ENSMUSG00000105426	lincRNA	1700021F02Rik	ENSMUST00000197576	lincRNA		5	1	103346594	350
ENSMUSG00000048424	protein_coding	Ranbp3l	ENSMUST00000166524	protein_coding		15	1	8968002	767
ENSMUSG00000030111	protein_coding	A2m	ENSMUST00000032203	protein_coding	principal1	6	1	121636228	4605
ENSMUSG00000108924	lincRNA	4933436H12Rik	ENSMUST00000207304	lincRNA		7	1	68417402	658
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000172977	nonsense_mediated_decay		13	1	44731598	670
ENSMUSG00000030232	protein_coding	Aebp2	ENSMUST00000162903	protein_coding		6	1	140637752	1198
ENSMUSG00000030111	protein_coding	A2m	ENSMUST00000203413	retained_intron		6	1	121658613	2579
ENSMUSG00000019143	protein_coding	Hars2	ENSMUST00000152954	protein_coding	principal1	18	1	36783008	3336
ENSMUSG00000019828	protein_coding	Grm1	ENSMUST00000044306	protein_coding		10	-1	11082356	6930
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000172924	processed_transcript		13	1	44731859	566
ENSMUSG00000048424	protein_coding	Ranbp3l	ENSMUST00000228227	retained_intron		15	1	8968002	3294
ENSMUSG00000108924	lincRNA	4933436H12Rik	ENSMUST00000208150	lincRNA		7	1	68417424	1531
ENSMUSG00000030232	protein_coding	Aebp2	ENSMUST00000162100	processed_transcript		6	1	140643163	1109
ENSMUSG00000108924	lincRNA	4933436H12Rik	ENSMUST00000207818	lincRNA		7	1	68417424	1466
ENSMUSG00000108924	lincRNA	4933436H12Rik	ENSMUST00000207558	lincRNA		7	1	68424592	673
ENSMUSG00000028712	protein_coding	Cyp4a31	ENSMUST00000030480	protein_coding		4	1	115563698	2396
ENSMUSG00000030232	protein_coding	Aebp2	ENSMUST00000160772	processed_transcript		6	1	140646817	480
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000172581	processed_transcript		13	1	44734040	456
ENSMUSG00000019143	protein_coding	Hars2	ENSMUST00000019287	protein_coding		18	1	36783231	2002
ENSMUSG00000104684	lincRNA	5430427N15Rik	ENSMUST00000200007	lincRNA		5	-1	103356698	2393
ENSMUSG00000041324	protein_coding	Inhba	ENSMUST00000042603	protein_coding	principal1	13	1	16011851	6390
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000037380	protein_coding	principal4	5	-1	67847434	8178
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000173906	protein_coding		13	1	44840691	3212
ENSMUSG00000019828	protein_coding	Grm1	ENSMUST00000135120	processed_transcript		10	-1	10748808	598
ENSMUSG00000019143	protein_coding	Hars2	ENSMUST00000145876	retained_intron		18	1	36783269	772
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000100941	protein_coding		6	1	125546774	1807
ENSMUSG00000019828	protein_coding	Grm1	ENSMUST00000155772	processed_transcript		10	-1	10719251	586
ENSMUSG00000038518	protein_coding	Jarid2	ENSMUST00000173003	nonsense_mediated_decay		13	1	44840783	673
ENSMUSG00000019143	protein_coding	Hars2	ENSMUST00000131952	retained_intron		18	1	36787014	819
ENSMUSG00000028712	protein_coding	Cyp4a31	ENSMUST00000126645	protein_coding		4	1	115563684	1055
ENSMUSG00000019828	protein_coding	Grm1	ENSMUST00000156826	processed_transcript		10	-1	11082250	450
ENSMUSG00000041324	protein_coding	Inhba	ENSMUST00000164993	protein_coding	principal1	13	1	16014475	1529
ENSMUSG00000019143	protein_coding	Hars2	ENSMUST00000155842	retained_intron		18	1	36787820	406
ENSMUSG00000019828	protein_coding	Grm1	ENSMUST00000105560	protein_coding	principal1	10	-1	11080956	4265
ENSMUSG00000056116	protein_coding	H2-T22	ENSMUST00000058801	protein_coding	alternative2	17	-1	36042690	1534
ENSMUSG00000113080	processed_pseudogene	Gm48928	ENSMUST00000223232	processed_pseudogene		13	-1	15970410	547
ENSMUSG00000028712	protein_coding	Cyp4a31	ENSMUST00000141033	protein_coding		4	1	115563649	533
ENSMUSG00000019143	protein_coding	Hars2	ENSMUST00000124204	retained_intron		18	1	36790013	769
ENSMUSG00000112730	antisense	4930567K20Rik	ENSMUST00000218098	antisense		10	1	10748930	398
ENSMUSG00000112730	antisense	4930567K20Rik	ENSMUST00000220108	antisense		10	1	10748960	646
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000072971	protein_coding	alternative2	5	-1	67847431	7154
ENSMUSG00000048424	protein_coding	Ranbp3l	ENSMUST00000227191	protein_coding		15	1	9007266	3393
ENSMUSG00000028702	protein_coding	Rad54l	ENSMUST00000139147	processed_transcript		4	-1	116100058	4571
ENSMUSG00000112730	antisense	4930567K20Rik	ENSMUST00000220270	antisense		10	1	10751046	445
ENSMUSG00000056116	protein_coding	H2-T22	ENSMUST00000173280	nonsense_mediated_decay		17	-1	36042683	1723
ENSMUSG00000113338	lincRNA	A530046M15Rik	ENSMUST00000221778	lincRNA		13	1	15807243	1538
ENSMUSG00000028712	protein_coding	Cyp4a31	ENSMUST00000030486	protein_coding	principal1	4	1	115563649	2509
ENSMUSG00000112730	antisense	4930567K20Rik	ENSMUST00000219096	antisense		10	1	10751080	427
ENSMUSG00000048424	protein_coding	Ranbp3l	ENSMUST00000053308	protein_coding	principal1	15	1	8968426	3017
ENSMUSG00000113224	antisense	Gm48444	ENSMUST00000223477	antisense		13	-1	16032275	573
ENSMUSG00000113290	TEC	A530058O07Rik	ENSMUST00000222059	TEC		13	1	15817316	3364
ENSMUSG00000114489	unprocessed_pseudogene	Vmn2r-ps109	ENSMUST00000225481	unprocessed_pseudogene		13	-1	66873358	1115
ENSMUSG00000095847	processed_pseudogene	Gm5451	ENSMUST00000080545	processed_pseudogene		13	1	66874081	579
ENSMUSG00000020428	protein_coding	Gabra6	ENSMUST00000020703	protein_coding	principal3	11	-1	42321049	2436
ENSMUSG00000073937	protein_coding	Olfr633	ENSMUST00000216006	protein_coding	principal1	7	1	103944437	3915
ENSMUSG00000113701	transcribed_processed_pseudogene	B230303A05Rik	ENSMUST00000220672	processed_transcript		13	-1	16023360	2706
ENSMUSG00000073937	protein_coding	Olfr633	ENSMUST00000098188	protein_coding	principal1	7	1	103946568	939
ENSMUSG00000113701	transcribed_processed_pseudogene	B230303A05Rik	ENSMUST00000220728	transcribed_processed_pseudogene		13	-1	15815382	478
ENSMUSG00000114374	processed_pseudogene	Gm7911	ENSMUST00000225178	processed_pseudogene		13	-1	66875710	621
ENSMUSG00000113701	transcribed_processed_pseudogene	B230303A05Rik	ENSMUST00000221744	processed_transcript		13	-1	15926667	587
ENSMUSG00000080751	polymorphic_pseudogene	Olfr634-ps1	ENSMUST00000119267	polymorphic_pseudogene	principal1	7	1	103956412	955
ENSMUSG00000029004	protein_coding	Kmt2e	ENSMUST00000196889	nonsense_mediated_decay		5	1	23434441	2061
ENSMUSG00000083457	unprocessed_pseudogene	Cyp4b1-ps2	ENSMUST00000119563	unprocessed_pseudogene		4	-1	115583144	333
ENSMUSG00000113701	transcribed_processed_pseudogene	B230303A05Rik	ENSMUST00000223006	processed_transcript		13	-1	16023423	748
ENSMUSG00000015702	protein_coding	Anxa9	ENSMUST00000107183	protein_coding	principal1	3	-1	95306804	1872
ENSMUSG00000020185	protein_coding	E2f7	ENSMUST00000073781	protein_coding	principal1	10	1	110745468	5473
ENSMUSG00000086013	lincRNA	Gm15706	ENSMUST00000139612	lincRNA		6	1	145250529	899
ENSMUSG00000015702	protein_coding	Anxa9	ENSMUST00000015846	protein_coding	principal1	3	-1	95307176	1851
ENSMUSG00000114057	lincRNA	Gm31450	ENSMUST00000220668	lincRNA		13	1	15931682	132
ENSMUSG00000108612	unprocessed_pseudogene	Gm44634	ENSMUST00000206119	unprocessed_pseudogene		8	1	3056294	152
ENSMUSG00000020185	protein_coding	E2f7	ENSMUST00000173471	protein_coding	principal1	10	1	110745513	3567
ENSMUSG00000052812	protein_coding	Atad2b	ENSMUST00000219187	retained_intron		12	1	4917353	4829
ENSMUSG00000090795	unprocessed_pseudogene	Gm7346	ENSMUST00000169661	unprocessed_pseudogene		8	1	3093369	476
ENSMUSG00000025358	protein_coding	Cdk2	ENSMUST00000026415	protein_coding	principal1	10	-1	128705003	2240
ENSMUSG00000015702	protein_coding	Anxa9	ENSMUST00000123365	protein_coding		3	-1	95306804	339
ENSMUSG00000017309	protein_coding	Cd300lg	ENSMUST00000123895	protein_coding		11	1	102041509	837
ENSMUSG00000108971	processed_pseudogene	Gm18210	ENSMUST00000209001	processed_pseudogene		8	1	3104279	1524
ENSMUSG00000020185	protein_coding	E2f7	ENSMUST00000173634	protein_coding		10	1	110745572	827
ENSMUSG00000015702	protein_coding	Anxa9	ENSMUST00000164406	protein_coding	principal1	3	-1	95306804	1611
ENSMUSG00000020185	protein_coding	E2f7	ENSMUST00000172574	processed_transcript		10	1	110754262	811
ENSMUSG00000032978	protein_coding	Guca2b	ENSMUST00000106309	protein_coding	alternative2	4	-1	119658781	697
ENSMUSG00000020185	protein_coding	E2f7	ENSMUST00000173948	nonsense_mediated_decay		10	1	110754332	817
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000200955	nonsense_mediated_decay		5	-1	67847295	5373
ENSMUSG00000086287	antisense	Gm15972	ENSMUST00000132571	antisense		18	-1	23752305	418
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000149501	processed_transcript		5	-1	67660034	762
ENSMUSG00000020185	protein_coding	E2f7	ENSMUST00000174593	retained_intron		10	1	110763856	501
ENSMUSG00000101801	antisense	1700020G17Rik	ENSMUST00000188776	antisense		10	-1	110896488	423
ENSMUSG00000056116	protein_coding	H2-T22	ENSMUST00000080015	protein_coding	principal3	17	-1	36042705	1761
ENSMUSG00000101801	antisense	1700020G17Rik	ENSMUST00000191429	antisense		10	-1	110896518	622
ENSMUSG00000025358	protein_coding	Cdk2	ENSMUST00000026416	protein_coding		10	-1	128705030	2406
ENSMUSG00000020428	protein_coding	Gabra6	ENSMUST00000155218	protein_coding	alternative2	11	-1	42321051	2467
ENSMUSG00000032978	protein_coding	Guca2b	ENSMUST00000044426	protein_coding	principal2	4	-1	119658954	605
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000155911	retained_intron		5	-1	67776759	2932
ENSMUSG00000020428	protein_coding	Gabra6	ENSMUST00000109286	protein_coding	alternative2	11	-1	42321072	1554
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000152433	retained_intron		5	-1	67769117	617
ENSMUSG00000101801	antisense	1700020G17Rik	ENSMUST00000191286	antisense		10	-1	110896550	723
ENSMUSG00000056116	protein_coding	H2-T22	ENSMUST00000077960	protein_coding	principal3	17	-1	36042747	1694
ENSMUSG00000108828	lincRNA	Gm34549	ENSMUST00000208300	lincRNA		7	1	68429215	896
ENSMUSG00000113883	lincRNA	Gm36500	ENSMUST00000221821	lincRNA		13	1	34133860	1626
ENSMUSG00000108828	lincRNA	Gm34549	ENSMUST00000208336	lincRNA		7	1	68432662	1491
ENSMUSG00000108828	lincRNA	Gm34549	ENSMUST00000207057	lincRNA		7	1	68432662	1611
ENSMUSG00000108828	lincRNA	Gm34549	ENSMUST00000207356	lincRNA		7	1	68433085	970
ENSMUSG00000101801	antisense	1700020G17Rik	ENSMUST00000190237	antisense		10	-1	110896537	739
ENSMUSG00000109298	lincRNA	Gm44886	ENSMUST00000209009	lincRNA		7	1	68439373	1304
ENSMUSG00000067212	protein_coding	H2-T23	ENSMUST00000174161	retained_intron		17	-1	36032541	2642
ENSMUSG00000118002	lincRNA	Gm4107	ENSMUST00000237993	lincRNA		18	-1	46427043	488
ENSMUSG00000118002	lincRNA	Gm4107	ENSMUST00000237447	lincRNA		18	-1	46427128	626
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000210135	protein_coding	principal2	14	1	27622428	6233
ENSMUSG00000046487	processed_pseudogene	Mospd4	ENSMUST00000180618	processed_pseudogene		18	-1	46465790	576
ENSMUSG00000118116	processed_pseudogene	Gm3720	ENSMUST00000235462	processed_pseudogene		18	1	46497085	791
ENSMUSG00000069255	protein_coding	Dusp22	ENSMUST00000091672	protein_coding	alternative1	13	1	30659999	1161
ENSMUSG00000015711	protein_coding	Prune1	ENSMUST00000015855	protein_coding	principal1	3	-1	95282076	3140
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000090302	protein_coding		14	1	27622442	6083
ENSMUSG00000069255	protein_coding	Dusp22	ENSMUST00000110310	protein_coding		13	1	30660061	2319
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000211087	protein_coding		14	1	27622496	1356
ENSMUSG00000015711	protein_coding	Prune1	ENSMUST00000148959	retained_intron		3	-1	95268944	774
ENSMUSG00000086769	antisense	Gm15587	ENSMUST00000146326	antisense		5	-1	24383582	3493
ENSMUSG00000069255	protein_coding	Dusp22	ENSMUST00000220748	processed_transcript		13	1	30660072	353
ENSMUSG00000093424	antisense	6330562C20Rik	ENSMUST00000198947	antisense		3	-1	95315068	360
ENSMUSG00000086769	antisense	Gm15587	ENSMUST00000156403	antisense		5	-1	24383614	709
ENSMUSG00000069255	protein_coding	Dusp22	ENSMUST00000221725	nonsense_mediated_decay		13	1	30660072	2994
ENSMUSG00000093424	antisense	6330562C20Rik	ENSMUST00000098867	antisense		3	-1	95315117	784
ENSMUSG00000025358	protein_coding	Cdk2	ENSMUST00000219099	retained_intron		10	-1	128705031	2971
ENSMUSG00000093424	antisense	6330562C20Rik	ENSMUST00000176569	antisense		3	-1	95315127	555
ENSMUSG00000033319	protein_coding	Fem1c	ENSMUST00000036226	protein_coding	principal1	18	-1	46525971	5726
ENSMUSG00000025358	protein_coding	Cdk2	ENSMUST00000219983	retained_intron		10	-1	128704979	1708
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000152640	processed_transcript		3	1	95281345	3548
ENSMUSG00000021823	protein_coding	Vcl	ENSMUST00000226113	retained_intron		14	1	20929398	3934
ENSMUSG00000025358	protein_coding	Cdk2	ENSMUST00000219601	retained_intron		10	-1	128704999	2673
ENSMUSG00000069255	protein_coding	Dusp22	ENSMUST00000095914	protein_coding	principal4	13	1	30660101	3015
ENSMUSG00000025358	protein_coding	Cdk2	ENSMUST00000220407	processed_transcript		10	-1	128704581	549
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000130652	processed_transcript		5	-1	67815230	469
ENSMUSG00000025358	protein_coding	Cdk2	ENSMUST00000219047	retained_intron		10	-1	128705003	3264
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000113652	protein_coding		5	-1	67847431	854
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000113651	protein_coding		5	-1	67847431	808
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000143013	retained_intron		5	-1	67847429	1014
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000209752	retained_intron		14	1	27622510	3339
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000210327	non_stop_decay		14	1	27623599	1099
ENSMUSG00000052812	protein_coding	Atad2b	ENSMUST00000045664	protein_coding	principal1	12	1	4917404	8035
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000202248	retained_intron		5	-1	67808736	3360
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000211145	protein_coding	alternative2	14	1	27652827	2874
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000128726	retained_intron		5	-1	67815239	750
ENSMUSG00000037685	protein_coding	Atp8a1	ENSMUST00000141443	protein_coding		5	-1	67815853	368
ENSMUSG00000031111	protein_coding	Igsf1	ENSMUST00000033442	protein_coding	principal1	X	-1	49797749	4421
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000211627	processed_transcript		14	1	27724636	1216
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000135249	processed_transcript		3	1	95281417	844
ENSMUSG00000052812	protein_coding	Atad2b	ENSMUST00000218303	retained_intron		12	1	4917407	1824
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000211636	processed_transcript		14	1	27798558	486
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000147963	processed_transcript		3	1	95281487	486
ENSMUSG00000087261	antisense	Gm15477	ENSMUST00000143945	antisense		5	1	67847065	2351
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000209476	processed_transcript		14	1	27873132	1098
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000211684	protein_coding		14	1	27876070	1074
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000210924	protein_coding		14	1	27876104	4871
ENSMUSG00000052812	protein_coding	Atad2b	ENSMUST00000218859	nonsense_mediated_decay		12	1	4969352	1343
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000149568	processed_transcript		3	1	95281845	1128
ENSMUSG00000087261	antisense	Gm15477	ENSMUST00000140578	antisense		5	1	67847135	2130
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000210524	retained_intron		14	1	27876414	638
ENSMUSG00000029179	protein_coding	Zcchc4	ENSMUST00000031077	protein_coding	principal3	5	1	52783054	5743
ENSMUSG00000052812	protein_coding	Atad2b	ENSMUST00000220408	retained_intron		12	1	4982052	3034
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000209800	retained_intron		14	1	28046428	3361
ENSMUSG00000031111	protein_coding	Igsf1	ENSMUST00000072037	protein_coding		X	-1	49795364	2515
ENSMUSG00000040640	protein_coding	Erc2	ENSMUST00000224045	processed_transcript		14	1	28455521	429
ENSMUSG00000102081	lincRNA	Gm28886	ENSMUST00000187350	lincRNA		Y	-1	44348829	174
ENSMUSG00000114653	processed_pseudogene	Gm18398	ENSMUST00000224481	processed_pseudogene		14	1	27714377	1501
ENSMUSG00000029179	protein_coding	Zcchc4	ENSMUST00000113904	protein_coding	alternative2	5	1	52783054	2485
ENSMUSG00000102081	lincRNA	Gm28886	ENSMUST00000187889	lincRNA		Y	-1	44348829	484
ENSMUSG00000114503	TEC	Gm20242	ENSMUST00000225453	TEC		14	1	28415997	1855
ENSMUSG00000029179	protein_coding	Zcchc4	ENSMUST00000157074	retained_intron		5	1	52783086	4194
ENSMUSG00000109849	antisense	Gm45645	ENSMUST00000211470	antisense		14	-1	27876217	1963
ENSMUSG00000029179	protein_coding	Zcchc4	ENSMUST00000199840	protein_coding		5	1	52783116	430
ENSMUSG00000029179	protein_coding	Zcchc4	ENSMUST00000198465	processed_transcript		5	1	52783122	373
ENSMUSG00000030654	protein_coding	Arl6ip1	ENSMUST00000032888	protein_coding	principal1	7	-1	118129662	2171
ENSMUSG00000102031	lincRNA	Gm29426	ENSMUST00000186564	lincRNA		Y	-1	44388191	536
ENSMUSG00000031111	protein_coding	Igsf1	ENSMUST00000114891	protein_coding		X	-1	49797749	1761
ENSMUSG00000102031	lincRNA	Gm29426	ENSMUST00000185613	lincRNA		Y	-1	44388191	351
ENSMUSG00000029179	protein_coding	Zcchc4	ENSMUST00000149612	processed_transcript		5	1	52798030	755
ENSMUSG00000030145	protein_coding	Zfp248	ENSMUST00000069292	protein_coding	principal1	6	-1	118455528	3683
ENSMUSG00000100408	processed_pseudogene	Gm28885	ENSMUST00000185615	processed_pseudogene		Y	1	44454247	563
ENSMUSG00000029179	protein_coding	Zcchc4	ENSMUST00000143745	retained_intron		5	1	52804326	812
ENSMUSG00000026799	protein_coding	Med27	ENSMUST00000028139	protein_coding	principal1	2	1	29346819	1254
ENSMUSG00000030145	protein_coding	Zfp248	ENSMUST00000161519	protein_coding		6	-1	118455498	2243
ENSMUSG00000031111	protein_coding	Igsf1	ENSMUST00000114893	protein_coding		X	-1	49788243	2671
ENSMUSG00000112336	antisense	Gm47766	ENSMUST00000218666	antisense		12	1	80259443	735
ENSMUSG00000026799	protein_coding	Med27	ENSMUST00000113830	protein_coding		2	1	29346833	1686
ENSMUSG00000026799	protein_coding	Med27	ENSMUST00000162603	protein_coding		2	1	29377840	514
ENSMUSG00000030145	protein_coding	Zfp248	ENSMUST00000162275	processed_transcript		6	-1	118455419	457
ENSMUSG00000030145	protein_coding	Zfp248	ENSMUST00000159403	protein_coding		6	-1	118455065	480
ENSMUSG00000031111	protein_coding	Igsf1	ENSMUST00000135492	processed_transcript		X	-1	49797735	417
ENSMUSG00000030654	protein_coding	Arl6ip1	ENSMUST00000205182	processed_transcript		7	-1	118129110	831
ENSMUSG00000106310	TEC	Gm43523	ENSMUST00000197397	TEC		5	1	14242462	2878
ENSMUSG00000030145	protein_coding	Zfp248	ENSMUST00000189168	retained_intron		6	-1	118455502	1615
ENSMUSG00000030654	protein_coding	Arl6ip1	ENSMUST00000203154	nonsense_mediated_decay		7	-1	118129576	542
ENSMUSG00000030145	protein_coding	Zfp248	ENSMUST00000161176	retained_intron		6	-1	118455471	1047
ENSMUSG00000030145	protein_coding	Zfp248	ENSMUST00000159254	processed_transcript		6	-1	118454756	616
ENSMUSG00000030654	protein_coding	Arl6ip1	ENSMUST00000206491	protein_coding		7	-1	118129574	404
ENSMUSG00000109375	processed_pseudogene	Gm44887	ENSMUST00000208980	processed_pseudogene		7	-1	68598854	178
ENSMUSG00000030654	protein_coding	Arl6ip1	ENSMUST00000204005	nonsense_mediated_decay		7	-1	118129560	522
ENSMUSG00000038295	protein_coding	Atg9b	ENSMUST00000059401	protein_coding	principal1	5	-1	24392143	3902
ENSMUSG00000026799	protein_coding	Med27	ENSMUST00000162597	protein_coding		2	1	29377840	489
ENSMUSG00000030654	protein_coding	Arl6ip1	ENSMUST00000206536	retained_intron		7	-1	118129572	454
ENSMUSG00000094854	processed_pseudogene	Gm5334	ENSMUST00000187472	processed_pseudogene		7	1	68618838	720
ENSMUSG00000083708	processed_pseudogene	Gm13123	ENSMUST00000122173	processed_pseudogene		4	1	144247777	492
ENSMUSG00000041420	protein_coding	Meis3	ENSMUST00000176506	protein_coding		7	1	16175275	1839
ENSMUSG00000026799	protein_coding	Med27	ENSMUST00000162623	protein_coding		2	1	29378514	410
ENSMUSG00000029004	protein_coding	Kmt2e	ENSMUST00000094962	protein_coding	principal1	5	1	23434441	7252
ENSMUSG00000063531	protein_coding	Sema3e	ENSMUST00000130116	retained_intron		5	1	14025276	5206
ENSMUSG00000026799	protein_coding	Med27	ENSMUST00000159280	protein_coding		2	1	29378533	732
ENSMUSG00000026799	protein_coding	Med27	ENSMUST00000159034	protein_coding		2	1	29378605	662
ENSMUSG00000038295	protein_coding	Atg9b	ENSMUST00000138716	processed_transcript		5	-1	24390635	1837
ENSMUSG00000029004	protein_coding	Kmt2e	ENSMUST00000115128	protein_coding	principal1	5	1	23434449	7317
ENSMUSG00000036749	protein_coding	Pramel5	ENSMUST00000035757	protein_coding	principal1	4	-1	144280466	2147
ENSMUSG00000067212	protein_coding	H2-T23	ENSMUST00000102678	protein_coding	principal1	17	-1	36032855	1472
ENSMUSG00000038295	protein_coding	Atg9b	ENSMUST00000128831	processed_transcript		5	-1	24387966	490
ENSMUSG00000026799	protein_coding	Med27	ENSMUST00000123522	processed_transcript		2	1	29391344	552
ENSMUSG00000029004	protein_coding	Kmt2e	ENSMUST00000200330	processed_transcript		5	1	23478555	405
ENSMUSG00000026799	protein_coding	Med27	ENSMUST00000162773	retained_intron		2	1	29496511	457
ENSMUSG00000036749	protein_coding	Pramel5	ENSMUST00000144127	processed_transcript		4	-1	144280479	676
ENSMUSG00000026799	protein_coding	Med27	ENSMUST00000147547	processed_transcript		2	1	29504871	581
ENSMUSG00000036749	protein_coding	Pramel5	ENSMUST00000133357	processed_transcript		4	-1	144280488	405
ENSMUSG00000067212	protein_coding	H2-T23	ENSMUST00000174839	retained_intron		17	-1	36032690	1942
ENSMUSG00000029004	protein_coding	Kmt2e	ENSMUST00000146375	nonsense_mediated_decay		5	1	23485501	1074
ENSMUSG00000067212	protein_coding	H2-T23	ENSMUST00000174471	retained_intron		17	-1	36032730	782
ENSMUSG00000036749	protein_coding	Pramel5	ENSMUST00000105752	protein_coding	principal1	4	-1	144274027	2060
ENSMUSG00000082413	processed_pseudogene	Gm13401	ENSMUST00000117074	processed_pseudogene		2	1	29498212	291
ENSMUSG00000029004	protein_coding	Kmt2e	ENSMUST00000196260	protein_coding		5	1	23485549	734
ENSMUSG00000023915	protein_coding	Tnfrsf21	ENSMUST00000024708	protein_coding	principal1	17	1	43016555	3627
ENSMUSG00000086994	antisense	Gm13402	ENSMUST00000153600	antisense		2	-1	29396459	424
ENSMUSG00000021823	protein_coding	Vcl	ENSMUST00000022369	protein_coding	principal1	14	1	20929398	5267
ENSMUSG00000092368	antisense	A930015D03Rik	ENSMUST00000173900	antisense		17	1	35994453	1111
ENSMUSG00000023915	protein_coding	Tnfrsf21	ENSMUST00000233482	retained_intron		17	1	43016568	1659
ENSMUSG00000082147	processed_pseudogene	Gm14570	ENSMUST00000119444	processed_pseudogene		X	-1	39751216	391
ENSMUSG00000001995	protein_coding	Sipa1l2	ENSMUST00000212168	protein_coding	alternative2	8	-1	125569756	6586
ENSMUSG00000021823	protein_coding	Vcl	ENSMUST00000224380	protein_coding		14	1	21022003	446
ENSMUSG00000083845	processed_pseudogene	Gm14571	ENSMUST00000118292	processed_pseudogene		X	1	39796584	570
ENSMUSG00000029004	protein_coding	Kmt2e	ENSMUST00000126586	nonsense_mediated_decay		5	1	23492421	1734
ENSMUSG00000080895	processed_pseudogene	Gm11645	ENSMUST00000121589	processed_pseudogene		2	-1	143507059	649
ENSMUSG00000029004	protein_coding	Kmt2e	ENSMUST00000197591	retained_intron		5	1	23492958	3401
ENSMUSG00000025357	protein_coding	Dgka	ENSMUST00000026414	protein_coding	principal1	10	-1	128744075	2834
ENSMUSG00000029004	protein_coding	Kmt2e	ENSMUST00000194010	nonsense_mediated_decay		5	1	23498269	621
ENSMUSG00000001995	protein_coding	Sipa1l2	ENSMUST00000212987	protein_coding	principal2	8	-1	125569808	6690
ENSMUSG00000002297	protein_coding	Dbf4	ENSMUST00000002368	protein_coding	alternative2	5	-1	8422680	2401
ENSMUSG00000001995	protein_coding	Sipa1l2	ENSMUST00000212604	retained_intron		8	-1	125569703	3024
ENSMUSG00000095240	protein_coding	Cypt14	ENSMUST00000179096	protein_coding	principal1	X	-1	39863604	508
ENSMUSG00000028702	protein_coding	Rad54l	ENSMUST00000102705	protein_coding	principal1	4	-1	116123685	2780
ENSMUSG00000025602	protein_coding	Zfp202	ENSMUST00000168691	nonsense_mediated_decay		9	1	40192316	3873
ENSMUSG00000001380	protein_coding	Hars	ENSMUST00000001416	protein_coding	principal1	18	-1	36783205	1989
ENSMUSG00000001995	protein_coding	Sipa1l2	ENSMUST00000108775	protein_coding	principal2	8	-1	125492710	6365
ENSMUSG00000041420	protein_coding	Meis3	ENSMUST00000175946	retained_intron		7	1	16175388	1925
ENSMUSG00000025357	protein_coding	Dgka	ENSMUST00000219834	nonsense_mediated_decay		10	-1	128744855	2756
ENSMUSG00000025357	protein_coding	Dgka	ENSMUST00000217957	retained_intron		10	-1	128731047	2194
ENSMUSG00000025927	protein_coding	Tfap2b	ENSMUST00000027059	protein_coding	principal1	1	1	19208914	5863
ENSMUSG00000001380	protein_coding	Hars	ENSMUST00000235494	protein_coding		18	-1	36770227	538
ENSMUSG00000086157	processed_transcript	Gm14643	ENSMUST00000144412	processed_transcript		X	1	39870500	1848
ENSMUSG00000075161	protein_coding	Olfr1109	ENSMUST00000217066	protein_coding	principal1	2	-1	87096008	2384
ENSMUSG00000075161	protein_coding	Olfr1109	ENSMUST00000214636	protein_coding	principal1	2	-1	87096008	2483
ENSMUSG00000080903	processed_pseudogene	Gm16383	ENSMUST00000118122	processed_pseudogene		X	1	40001217	232
ENSMUSG00000082005	processed_pseudogene	Gm7189	ENSMUST00000119811	processed_pseudogene		X	-1	40001210	429
ENSMUSG00000028702	protein_coding	Rad54l	ENSMUST00000102704	protein_coding	principal1	4	-1	116123659	3025
ENSMUSG00000001380	protein_coding	Hars	ENSMUST00000236395	retained_intron		18	-1	36783120	703
ENSMUSG00000075161	protein_coding	Olfr1109	ENSMUST00000099863	protein_coding	principal1	2	-1	87093395	939
ENSMUSG00000025927	protein_coding	Tfap2b	ENSMUST00000187754	protein_coding		1	1	19208960	3023
ENSMUSG00000080996	processed_pseudogene	Gm4986	ENSMUST00000119731	processed_pseudogene		X	-1	40137556	549
ENSMUSG00000001380	protein_coding	Hars	ENSMUST00000235863	nonsense_mediated_decay		18	-1	36783122	546
ENSMUSG00000083174	processed_pseudogene	Gm7190	ENSMUST00000118669	processed_pseudogene		X	-1	40008588	1452
ENSMUSG00000107145	processed_pseudogene	Gm43442	ENSMUST00000202865	processed_pseudogene		6	1	35926711	414
ENSMUSG00000020282	protein_coding	Rhbdf1	ENSMUST00000020524	protein_coding	principal1	11	-1	32222300	2946
ENSMUSG00000028702	protein_coding	Rad54l	ENSMUST00000152741	processed_transcript		4	-1	116122982	654
ENSMUSG00000002297	protein_coding	Dbf4	ENSMUST00000171808	protein_coding	principal3	5	-1	8422716	2402
ENSMUSG00000025927	protein_coding	Tfap2b	ENSMUST00000064976	protein_coding		1	1	19212054	1946
ENSMUSG00000028702	protein_coding	Rad54l	ENSMUST00000138320	processed_transcript		4	-1	116112797	209
ENSMUSG00000095768	protein_coding	Vmn1r111	ENSMUST00000179511	protein_coding	principal1	7	-1	20703216	921
ENSMUSG00000002297	protein_coding	Dbf4	ENSMUST00000168500	protein_coding		5	-1	8422582	2000
ENSMUSG00000028702	protein_coding	Rad54l	ENSMUST00000143089	processed_transcript		4	-1	116123690	1519
ENSMUSG00000025927	protein_coding	Tfap2b	ENSMUST00000191068	retained_intron		1	1	19212306	610
ENSMUSG00000075160	protein_coding	Olfr259	ENSMUST00000215828	protein_coding	principal1	2	-1	87109945	4095
ENSMUSG00000002297	protein_coding	Dbf4	ENSMUST00000168637	retained_intron		5	-1	8400305	929
ENSMUSG00000107089	TEC	Gm43443	ENSMUST00000202337	TEC		6	-1	36189099	2393
ENSMUSG00000025927	protein_coding	Tfap2b	ENSMUST00000186972	retained_intron		1	1	19213879	592
ENSMUSG00000002297	protein_coding	Dbf4	ENSMUST00000163141	protein_coding		5	-1	8403191	582
ENSMUSG00000075160	protein_coding	Olfr259	ENSMUST00000213978	protein_coding	principal1	2	-1	87111652	4046
ENSMUSG00000109138	processed_pseudogene	Gm18052	ENSMUST00000208750	processed_pseudogene		7	1	20722453	559
ENSMUSG00000075160	protein_coding	Olfr259	ENSMUST00000216088	protein_coding	principal1	2	-1	87114567	4023
ENSMUSG00000014773	protein_coding	Dll1	ENSMUST00000014917	protein_coding	principal1	17	-1	15375976	3581
ENSMUSG00000041420	protein_coding	Meis3	ENSMUST00000177156	nonsense_mediated_decay		7	1	16175430	1724
ENSMUSG00000075160	protein_coding	Olfr259	ENSMUST00000099862	protein_coding	principal1	2	-1	87108385	939
ENSMUSG00000027419	protein_coding	Pcsk2	ENSMUST00000124751	processed_transcript		2	1	143546271	3686
ENSMUSG00000020282	protein_coding	Rhbdf1	ENSMUST00000143036	retained_intron		11	-1	32217317	5089
ENSMUSG00000095190	protein_coding	Gm10668	ENSMUST00000191073	protein_coding	principal1	7	-1	20730624	1581
ENSMUSG00000014773	protein_coding	Dll1	ENSMUST00000140784	retained_intron		17	-1	15368390	751
ENSMUSG00000095190	protein_coding	Gm10668	ENSMUST00000179491	protein_coding	principal1	7	-1	20725824	906
ENSMUSG00000108834	processed_pseudogene	Gm18458	ENSMUST00000207908	processed_pseudogene		7	1	20734768	369
ENSMUSG00000049723	protein_coding	Mmp12	ENSMUST00000120655	protein_coding	alternative2	9	1	7344397	1452
ENSMUSG00000087343	antisense	1700021N21Rik	ENSMUST00000131110	antisense		4	-1	134450171	904
ENSMUSG00000002297	protein_coding	Dbf4	ENSMUST00000166364	retained_intron		5	-1	8422681	2509
ENSMUSG00000041420	protein_coding	Meis3	ENSMUST00000002495	protein_coding	principal1	7	1	16175430	1731
ENSMUSG00000094284	protein_coding	Vmn1r112	ENSMUST00000174538	protein_coding	principal1	7	1	20771185	894
ENSMUSG00000014773	protein_coding	Dll1	ENSMUST00000152416	processed_transcript		17	-1	15371831	605
ENSMUSG00000002297	protein_coding	Dbf4	ENSMUST00000197442	retained_intron		5	-1	8405240	2098
ENSMUSG00000002297	protein_coding	Dbf4	ENSMUST00000170927	processed_transcript		5	-1	8422694	2275
ENSMUSG00000002297	protein_coding	Dbf4	ENSMUST00000198785	retained_intron		5	-1	8422669	486
ENSMUSG00000041420	protein_coding	Meis3	ENSMUST00000183527	retained_intron		7	1	16177746	637
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000155090	nonsense_mediated_decay		X	1	7607083	6058
ENSMUSG00000014773	protein_coding	Dll1	ENSMUST00000129395	retained_intron		17	-1	15374072	725
ENSMUSG00000020282	protein_coding	Rhbdf1	ENSMUST00000146179	nonsense_mediated_decay		11	-1	32222280	2805
ENSMUSG00000014773	protein_coding	Dll1	ENSMUST00000124196	retained_intron		17	-1	15375100	797
ENSMUSG00000018425	protein_coding	Dhx40	ENSMUST00000018569	protein_coding	principal1	11	-1	86807746	3813
ENSMUSG00000041420	protein_coding	Meis3	ENSMUST00000176446	nonsense_mediated_decay		7	1	16179042	640
ENSMUSG00000063531	protein_coding	Sema3e	ENSMUST00000073957	protein_coding	principal1	5	1	14025276	6861
ENSMUSG00000108078	processed_pseudogene	Gm8744	ENSMUST00000204475	processed_pseudogene		6	1	10882429	3581
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000101655	protein_coding	alternative2	11	-1	3189056	3888
ENSMUSG00000020282	protein_coding	Rhbdf1	ENSMUST00000143988	protein_coding		11	-1	32211139	696
ENSMUSG00000041420	protein_coding	Meis3	ENSMUST00000176714	retained_intron		7	1	16184090	1147
ENSMUSG00000018425	protein_coding	Dhx40	ENSMUST00000148263	protein_coding		11	-1	86801088	912
ENSMUSG00000050035	protein_coding	Fhl4	ENSMUST00000059383	protein_coding	principal1	10	-1	85102495	3402
ENSMUSG00000014773	protein_coding	Dll1	ENSMUST00000143460	protein_coding		17	-1	15376872	716
ENSMUSG00000107847	lincRNA	Gm35822	ENSMUST00000204954	lincRNA		6	1	10895490	562
ENSMUSG00000117346	processed_pseudogene	Gm7874	ENSMUST00000234742	processed_pseudogene		18	1	27046354	818
ENSMUSG00000018425	protein_coding	Dhx40	ENSMUST00000136977	processed_transcript		11	-1	86789279	641
ENSMUSG00000020282	protein_coding	Rhbdf1	ENSMUST00000142274	retained_intron		11	-1	32210900	709
ENSMUSG00000117646	processed_pseudogene	Gm49977	ENSMUST00000234185	processed_pseudogene		18	-1	27091187	345
ENSMUSG00000103894	unprocessed_pseudogene	Gm37129	ENSMUST00000195791	unprocessed_pseudogene		Y	1	22737573	315
ENSMUSG00000063531	protein_coding	Sema3e	ENSMUST00000199698	retained_intron		5	1	14230107	1849
ENSMUSG00000020282	protein_coding	Rhbdf1	ENSMUST00000137125	retained_intron		11	-1	32211270	490
ENSMUSG00000050035	protein_coding	Fhl4	ENSMUST00000216889	protein_coding	principal1	10	-1	85102495	1860
ENSMUSG00000020282	protein_coding	Rhbdf1	ENSMUST00000132578	nonsense_mediated_decay		11	-1	32222280	708
ENSMUSG00000018425	protein_coding	Dhx40	ENSMUST00000131798	processed_transcript		11	-1	86807039	626
ENSMUSG00000103795	unprocessed_pseudogene	Gm37990	ENSMUST00000195821	unprocessed_pseudogene		Y	1	22774088	696
ENSMUSG00000085352	antisense	Gm4128	ENSMUST00000154338	antisense		5	-1	14074157	461
ENSMUSG00000020282	protein_coding	Rhbdf1	ENSMUST00000150381	protein_coding		11	-1	32222244	509
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000081318	protein_coding	principal2	11	-1	3193407	3969
ENSMUSG00000081610	processed_pseudogene	Gm13733	ENSMUST00000117290	processed_pseudogene		2	-1	87124368	535
ENSMUSG00000105528	TEC	Gm43519	ENSMUST00000197239	TEC		5	1	14027894	1872
ENSMUSG00000025602	protein_coding	Zfp202	ENSMUST00000026693	protein_coding	principal1	9	1	40192317	3461
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000144522	retained_intron		X	1	7607098	3838
ENSMUSG00000082281	processed_pseudogene	Gm4886	ENSMUST00000121874	processed_pseudogene		7	-1	103977107	1176
ENSMUSG00000100991	unprocessed_pseudogene	Gm21856	ENSMUST00000187547	unprocessed_pseudogene		Y	-1	44758675	696
ENSMUSG00000030074	protein_coding	Gxylt2	ENSMUST00000032157	protein_coding	principal1	6	1	100704734	7658
ENSMUSG00000025602	protein_coding	Zfp202	ENSMUST00000168832	protein_coding		9	1	40192329	3329
ENSMUSG00000094520	protein_coding	Olfr635	ENSMUST00000209473	protein_coding	principal1	7	1	103971152	8565
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000066391	protein_coding	alternative2	11	-1	3193463	3898
ENSMUSG00000094520	protein_coding	Olfr635	ENSMUST00000098185	protein_coding		7	1	103979176	966
ENSMUSG00000020282	protein_coding	Rhbdf1	ENSMUST00000144902	protein_coding		11	-1	32222259	353
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000153425	protein_coding	alternative2	11	-1	3189056	3759
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000039537	protein_coding		3	1	95282944	2800
ENSMUSG00000101649	lincRNA	Gm29444	ENSMUST00000187152	lincRNA		Y	1	44821007	1156
ENSMUSG00000062604	protein_coding	Srpk2	ENSMUST00000088392	protein_coding	principal1	5	-1	23616534	6491
ENSMUSG00000118112	processed_pseudogene	Gm50349	ENSMUST00000236084	processed_pseudogene		18	-1	38481303	241
ENSMUSG00000030074	protein_coding	Gxylt2	ENSMUST00000141333	processed_transcript		6	1	100704755	1222
ENSMUSG00000101649	lincRNA	Gm29444	ENSMUST00000191334	lincRNA		Y	1	44821116	437
ENSMUSG00000118296	processed_pseudogene	Gm19100	ENSMUST00000236625	processed_pseudogene		18	1	38582850	606
ENSMUSG00000067724	protein_coding	Gbx1	ENSMUST00000088311	protein_coding	principal1	5	-1	24527202	3475
ENSMUSG00000110629	lincRNA	4930567H12Rik	ENSMUST00000212512	lincRNA		8	1	125584632	766
ENSMUSG00000037625	protein_coding	Cldn11	ENSMUST00000046174	protein_coding	principal1	3	1	31149920	1870
ENSMUSG00000084157	processed_pseudogene	Gm15576	ENSMUST00000117806	processed_pseudogene		6	1	100726234	583
ENSMUSG00000067344	processed_pseudogene	Rps25-ps1	ENSMUST00000119876	processed_pseudogene		6	1	145266400	378
ENSMUSG00000107989	TEC	Gm19692	ENSMUST00000203856	TEC		6	1	100791829	2084
ENSMUSG00000102116	lincRNA	Gm28887	ENSMUST00000186065	lincRNA		Y	-1	44827383	294
ENSMUSG00000110629	lincRNA	4930567H12Rik	ENSMUST00000212260	lincRNA		8	1	125584638	955
ENSMUSG00000020648	protein_coding	Dus4l	ENSMUST00000020977	protein_coding	principal1	12	-1	31654826	1773
ENSMUSG00000107948	lincRNA	AA545190	ENSMUST00000203495	lincRNA		6	-1	10979638	1053
ENSMUSG00000095960	processed_pseudogene	Gm13120	ENSMUST00000117343	processed_pseudogene		4	1	144296692	1446
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000107187	protein_coding	principal1	3	1	95282944	2827
ENSMUSG00000107948	lincRNA	AA545190	ENSMUST00000204434	lincRNA		6	-1	10979613	542
ENSMUSG00000110629	lincRNA	4930567H12Rik	ENSMUST00000213085	lincRNA		8	1	125584647	801
ENSMUSG00000087277	lincRNA	2010013B24Rik	ENSMUST00000126922	lincRNA		6	1	145303152	747
ENSMUSG00000095353	unprocessed_pseudogene	Gm21783	ENSMUST00000179570	unprocessed_pseudogene		Y	-1	44981263	696
ENSMUSG00000117011	lincRNA	E130008D07Rik	ENSMUST00000233163	lincRNA		17	-1	43158266	1513
ENSMUSG00000107948	lincRNA	AA545190	ENSMUST00000205141	lincRNA		6	-1	10974378	445
ENSMUSG00000108234	TEC	Gm44428	ENSMUST00000204474	TEC		6	1	145304310	874
ENSMUSG00000110629	lincRNA	4930567H12Rik	ENSMUST00000212530	lincRNA		8	1	125584659	616
ENSMUSG00000020648	protein_coding	Dus4l	ENSMUST00000219098	processed_transcript		12	-1	31654806	388
ENSMUSG00000020648	protein_coding	Dus4l	ENSMUST00000219855	processed_transcript		12	-1	31654776	296
ENSMUSG00000046636	unprocessed_pseudogene	Gm7729	ENSMUST00000050143	unprocessed_pseudogene		18	1	27598644	801
ENSMUSG00000083962	processed_pseudogene	Gm15707	ENSMUST00000118804	processed_pseudogene		6	-1	145316608	996
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000135264	retained_intron		3	1	95283215	1553
ENSMUSG00000117011	lincRNA	E130008D07Rik	ENSMUST00000233120	lincRNA		17	-1	43158196	4428
ENSMUSG00000091638	protein_coding	Vmn1r113	ENSMUST00000173723	protein_coding	principal1	7	1	20787285	924
ENSMUSG00000097888	lincRNA	Gm26682	ENSMUST00000180850	lincRNA		18	-1	5165731	1770
ENSMUSG00000117011	lincRNA	E130008D07Rik	ENSMUST00000232795	lincRNA		17	-1	43158291	3416
ENSMUSG00000113768	unprocessed_pseudogene	Gm9237	ENSMUST00000221499	unprocessed_pseudogene		12	1	18681374	548
ENSMUSG00000055621	unprocessed_pseudogene	Olfr636-ps1	ENSMUST00000134827	unprocessed_pseudogene		7	-1	103990036	935
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000137743	processed_transcript		3	1	95283602	393
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000144447	retained_intron		11	-1	3136007	3792
ENSMUSG00000116718	lincRNA	Gm49668	ENSMUST00000231577	lincRNA		17	-1	15434964	1056
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000143498	protein_coding		3	1	95285839	641
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000140846	protein_coding	alternative2	11	-1	3189052	3604
ENSMUSG00000116718	lincRNA	Gm49668	ENSMUST00000231947	lincRNA		17	-1	15434965	1843
ENSMUSG00000091638	protein_coding	Vmn1r113	ENSMUST00000168794	protein_coding		7	1	20787285	894
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000153928	processed_transcript		3	1	95286199	402
ENSMUSG00000094085	protein_coding	Vmn1r114	ENSMUST00000098737	protein_coding	principal1	7	-1	20812186	966
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000133762	processed_transcript		3	1	95291986	1373
ENSMUSG00000062604	protein_coding	Srpk2	ENSMUST00000196929	nonsense_mediated_decay		5	-1	23676448	4259
ENSMUSG00000103919	protein_coding	Gm21366	ENSMUST00000192892	protein_coding	principal1	Y	-1	22861256	923
ENSMUSG00000062604	protein_coding	Srpk2	ENSMUST00000200173	processed_transcript		5	-1	23542118	1320
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000112254	protein_coding	principal1	6	1	125552948	8834
ENSMUSG00000060935	protein_coding	Tmem263	ENSMUST00000095383	protein_coding	principal1	10	1	85102627	3616
ENSMUSG00000049723	protein_coding	Mmp12	ENSMUST00000005950	protein_coding	principal3	9	1	7347374	3607
ENSMUSG00000070687	protein_coding	Htr1d	ENSMUST00000088677	protein_coding	principal1	4	1	136423524	2904
ENSMUSG00000062604	protein_coding	Srpk2	ENSMUST00000196388	protein_coding		5	-1	23676014	946
ENSMUSG00000038712	protein_coding	Mindy1	ENSMUST00000168223	protein_coding		3	1	95287948	1812
ENSMUSG00000049723	protein_coding	Mmp12	ENSMUST00000065079	protein_coding		9	1	7347374	1185
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000112253	protein_coding		6	1	125552963	2184
ENSMUSG00000062604	protein_coding	Srpk2	ENSMUST00000197622	retained_intron		5	-1	23675967	1963
ENSMUSG00000060935	protein_coding	Tmem263	ENSMUST00000216771	nonsense_mediated_decay		10	1	85102743	1200
ENSMUSG00000062604	protein_coding	Srpk2	ENSMUST00000198719	retained_intron		5	-1	23549370	2790
ENSMUSG00000015143	protein_coding	Actn1	ENSMUST00000021554	protein_coding	principal1	12	-1	80260371	3734
ENSMUSG00000049723	protein_coding	Mmp12	ENSMUST00000138220	processed_transcript		9	1	7347406	410
ENSMUSG00000015143	protein_coding	Actn1	ENSMUST00000219634	retained_intron		12	-1	80172144	1034
ENSMUSG00000073154	lincRNA	9330158H04Rik	ENSMUST00000101535	lincRNA		6	-1	36387851	3174
ENSMUSG00000062604	protein_coding	Srpk2	ENSMUST00000197985	protein_coding		5	-1	23684617	653
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000150548	retained_intron		6	1	125552963	2613
ENSMUSG00000073154	lincRNA	9330158H04Rik	ENSMUST00000161820	lincRNA		6	-1	36388092	2324
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000126709	processed_transcript		6	1	125566251	610
ENSMUSG00000049038	protein_coding	Mterf2	ENSMUST00000050813	protein_coding	principal1	10	-1	85128027	1567
ENSMUSG00000015143	protein_coding	Actn1	ENSMUST00000167327	protein_coding		12	-1	80260091	2664
ENSMUSG00000055150	protein_coding	Zfp78	ENSMUST00000207347	protein_coding	principal4	7	1	6363280	3883
ENSMUSG00000073154	lincRNA	9330158H04Rik	ENSMUST00000161161	lincRNA		6	-1	36388234	3103
ENSMUSG00000049038	protein_coding	Mterf2	ENSMUST00000217027	protein_coding		10	-1	85128027	595
ENSMUSG00000062604	protein_coding	Srpk2	ENSMUST00000198661	protein_coding		5	-1	23676355	440
ENSMUSG00000055150	protein_coding	Zfp78	ENSMUST00000208390	protein_coding	alternative2	7	1	6363310	2965
ENSMUSG00000073154	lincRNA	9330158H04Rik	ENSMUST00000161255	lincRNA		6	-1	36388288	555
ENSMUSG00000049723	protein_coding	Mmp12	ENSMUST00000148005	retained_intron		9	1	7347406	4474
ENSMUSG00000062604	protein_coding	Srpk2	ENSMUST00000198549	protein_coding		5	-1	23684600	460
ENSMUSG00000070687	protein_coding	Htr1d	ENSMUST00000121571	protein_coding	principal1	4	1	136423526	2426
ENSMUSG00000073154	lincRNA	9330158H04Rik	ENSMUST00000160156	lincRNA		6	-1	36390191	1555
ENSMUSG00000015143	protein_coding	Actn1	ENSMUST00000219382	retained_intron		12	-1	80170151	1410
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000134073	processed_transcript		6	1	125603550	3175
ENSMUSG00000049038	protein_coding	Mterf2	ENSMUST00000214607	protein_coding		10	-1	85126577	477
ENSMUSG00000062604	protein_coding	Srpk2	ENSMUST00000196592	retained_intron		5	-1	23616555	1826
ENSMUSG00000049038	protein_coding	Mterf2	ENSMUST00000214193	protein_coding		10	-1	85127995	337
ENSMUSG00000073154	lincRNA	9330158H04Rik	ENSMUST00000159032	lincRNA		6	-1	36388917	679
ENSMUSG00000015143	protein_coding	Actn1	ENSMUST00000217984	retained_intron		12	-1	80184848	449
ENSMUSG00000055150	protein_coding	Zfp78	ENSMUST00000208763	protein_coding		7	1	6363332	609
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000139678	retained_intron		6	1	125634348	2143
ENSMUSG00000070687	protein_coding	Htr1d	ENSMUST00000117699	protein_coding	principal1	4	1	136423530	2244
ENSMUSG00000049723	protein_coding	Mmp12	ENSMUST00000127722	nonsense_mediated_decay		9	1	7347406	2060
ENSMUSG00000055150	protein_coding	Zfp78	ENSMUST00000208030	protein_coding	alternative2	7	1	6363336	2169
ENSMUSG00000040978	protein_coding	Gm11992	ENSMUST00000043285	protein_coding	principal1	11	1	9048594	2400
ENSMUSG00000073154	lincRNA	9330158H04Rik	ENSMUST00000160187	lincRNA		6	-1	36389427	377
ENSMUSG00000070687	protein_coding	Htr1d	ENSMUST00000133818	processed_transcript		4	1	136424612	363
ENSMUSG00000073154	lincRNA	9330158H04Rik	ENSMUST00000159965	lincRNA		6	-1	36389058	333
ENSMUSG00000055150	protein_coding	Zfp78	ENSMUST00000207314	protein_coding	alternative2	7	1	6363380	4675
ENSMUSG00000073154	lincRNA	9330158H04Rik	ENSMUST00000163834	lincRNA		6	-1	36274356	414
ENSMUSG00000084236	unprocessed_pseudogene	Olfr637-ps1	ENSMUST00000120386	unprocessed_pseudogene		7	1	103995991	471
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000141521	retained_intron		6	1	125646339	4453
ENSMUSG00000027419	protein_coding	Pcsk2	ENSMUST00000028905	protein_coding	principal1	2	1	143546156	4723
ENSMUSG00000075159	protein_coding	Olfr1110	ENSMUST00000152758	protein_coding	principal1	2	-1	87140300	3159
ENSMUSG00000055150	protein_coding	Zfp78	ENSMUST00000086323	protein_coding	alternative2	7	1	6371364	1443
ENSMUSG00000017309	protein_coding	Cd300lg	ENSMUST00000017453	protein_coding	principal3	11	1	102041509	2353
ENSMUSG00000055150	protein_coding	Zfp78	ENSMUST00000108559	protein_coding	principal4	7	1	6371364	1539
ENSMUSG00000075159	protein_coding	Olfr1110	ENSMUST00000099861	protein_coding	principal1	2	-1	87136319	939
ENSMUSG00000024180	protein_coding	Tmem8	ENSMUST00000235821	protein_coding		17	1	26113299	2427
ENSMUSG00000099740	protein_coding	Gm28897	ENSMUST00000185340	protein_coding	principal1	Y	1	80926995	923
ENSMUSG00000015143	protein_coding	Actn1	ENSMUST00000218874	processed_transcript		12	-1	80259890	943
ENSMUSG00000015143	protein_coding	Actn1	ENSMUST00000220351	processed_transcript		12	-1	80258784	505
ENSMUSG00000028703	protein_coding	Lrrc41	ENSMUST00000030471	protein_coding	principal1	4	1	116075269	3065
ENSMUSG00000101802	lincRNA	Gm29445	ENSMUST00000189947	lincRNA		Y	1	45044002	1497
ENSMUSG00000021824	protein_coding	Ap3m1	ENSMUST00000154460	protein_coding	principal1	14	-1	21052450	6732
ENSMUSG00000112852	antisense	Gm47767	ENSMUST00000218235	antisense		12	1	80209243	367
ENSMUSG00000087115	antisense	Pcsk2os2	ENSMUST00000153878	antisense		2	-1	143789186	3370
ENSMUSG00000101802	lincRNA	Gm29445	ENSMUST00000188849	lincRNA		Y	1	45044455	437
ENSMUSG00000112830	processed_transcript	Gm47765	ENSMUST00000220316	processed_transcript		12	-1	80191428	346
ENSMUSG00000050930	protein_coding	Map10	ENSMUST00000053078	protein_coding	principal1	8	1	125669818	3542
ENSMUSG00000087115	antisense	Pcsk2os2	ENSMUST00000156362	antisense		2	-1	143795965	541
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000147101	nonsense_mediated_decay		6	1	125649269	2686
ENSMUSG00000021824	protein_coding	Ap3m1	ENSMUST00000022371	protein_coding		14	-1	21052222	1770
ENSMUSG00000045613	protein_coding	Chrm2	ENSMUST00000172278	protein_coding	principal1	6	1	36388084	5676
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000129436	retained_intron		6	1	125654931	334
ENSMUSG00000001930	protein_coding	Vwf	ENSMUST00000146264	processed_transcript		6	1	125685737	456
ENSMUSG00000021824	protein_coding	Ap3m1	ENSMUST00000224016	protein_coding		14	-1	21052195	764
ENSMUSG00000045613	protein_coding	Chrm2	ENSMUST00000169004	processed_transcript		6	1	36388195	697
ENSMUSG00000014763	protein_coding	Fam120b	ENSMUST00000055352	protein_coding	principal1	17	1	15396202	4420
ENSMUSG00000028978	protein_coding	Nos3	ENSMUST00000115090	protein_coding	alternative2	5	1	24364810	3697
ENSMUSG00000091435	protein_coding	Vmn1r115	ENSMUST00000169374	protein_coding	principal1	7	-1	20844985	888
ENSMUSG00000098041	lincRNA	Gm26981	ENSMUST00000182453	lincRNA		7	1	92729840	3169
ENSMUSG00000086171	antisense	Pcsk2os1	ENSMUST00000126735	antisense		2	-1	143547837	4233
ENSMUSG00000024180	protein_coding	Tmem8	ENSMUST00000025010	protein_coding	principal2	17	1	26113316	3464
ENSMUSG00000075158	protein_coding	Olfr1111	ENSMUST00000214492	protein_coding	principal1	2	-1	87152087	1616
ENSMUSG00000086171	antisense	Pcsk2os1	ENSMUST00000156780	antisense		2	-1	143545977	527
ENSMUSG00000033227	protein_coding	Wnt6	ENSMUST00000006716	protein_coding	principal1	1	1	74771892	2071
ENSMUSG00000075158	protein_coding	Olfr1111	ENSMUST00000216378	protein_coding	principal1	2	-1	87152624	1636
ENSMUSG00000050323	protein_coding	Ndufaf6	ENSMUST00000058183	protein_coding	principal1	4	-1	11076204	1082
ENSMUSG00000083665	processed_pseudogene	Gm14575	ENSMUST00000117210	processed_pseudogene		X	1	40661423	560
ENSMUSG00000024180	protein_coding	Tmem8	ENSMUST00000237058	protein_coding		17	1	26113343	2235
ENSMUSG00000014763	protein_coding	Fam120b	ENSMUST00000231274	retained_intron		17	1	15396248	5787
ENSMUSG00000075158	protein_coding	Olfr1111	ENSMUST00000099860	protein_coding	principal1	2	-1	87150659	940
ENSMUSG00000050323	protein_coding	Ndufaf6	ENSMUST00000144475	processed_transcript		4	-1	11059083	248
ENSMUSG00000033227	protein_coding	Wnt6	ENSMUST00000189544	retained_intron		1	1	74782439	920
ENSMUSG00000083484	processed_pseudogene	Gm14574	ENSMUST00000120644	processed_pseudogene		X	1	40691785	279
ENSMUSG00000014763	protein_coding	Fam120b	ENSMUST00000231318	retained_intron		17	1	15403404	3789
ENSMUSG00000024180	protein_coding	Tmem8	ENSMUST00000128597	protein_coding	alternative2	17	1	26116631	2433
ENSMUSG00000028703	protein_coding	Lrrc41	ENSMUST00000154274	processed_transcript		4	1	116075463	584
ENSMUSG00000028978	protein_coding	Nos3	ENSMUST00000030834	protein_coding	principal2	5	1	24364810	4132
ENSMUSG00000099472	antisense	Gm29539	ENSMUST00000188031	antisense		1	-1	74777405	758
ENSMUSG00000021824	protein_coding	Ap3m1	ENSMUST00000126536	nonsense_mediated_decay		14	-1	21052187	737
ENSMUSG00000084287	processed_pseudogene	Gm14576	ENSMUST00000118073	processed_pseudogene		X	-1	40928111	1111
ENSMUSG00000080943	unprocessed_pseudogene	Gm13130	ENSMUST00000119195	unprocessed_pseudogene		4	-1	144304941	1166
ENSMUSG00000041620	protein_coding	Mmp1b	ENSMUST00000047888	protein_coding	principal1	9	-1	7388047	1449
ENSMUSG00000028703	protein_coding	Lrrc41	ENSMUST00000133799	processed_transcript		4	1	116075545	353
ENSMUSG00000042345	protein_coding	Ubash3a	ENSMUST00000236745	protein_coding	principal1	17	1	31207873	7635
ENSMUSG00000021824	protein_coding	Ap3m1	ENSMUST00000156716	processed_transcript		14	-1	21052463	693
ENSMUSG00000080921	processed_pseudogene	Rpl38-ps2	ENSMUST00000117356	processed_pseudogene		6	-1	140747172	213
ENSMUSG00000081880	processed_pseudogene	Gm5385	ENSMUST00000118988	processed_pseudogene		X	1	41248575	1559
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000020003	protein_coding	principal1	10	-1	53751123	4164
ENSMUSG00000083515	processed_pseudogene	Gm14577	ENSMUST00000121134	processed_pseudogene		X	1	41372259	256
ENSMUSG00000028703	protein_coding	Lrrc41	ENSMUST00000138952	processed_transcript		4	1	116076885	451
ENSMUSG00000024180	protein_coding	Tmem8	ENSMUST00000236993	retained_intron		17	1	26117829	3356
ENSMUSG00000021824	protein_coding	Ap3m1	ENSMUST00000148886	processed_transcript		14	-1	21052077	562
ENSMUSG00000028703	protein_coding	Lrrc41	ENSMUST00000152577	processed_transcript		4	1	116079416	305
ENSMUSG00000024180	protein_coding	Tmem8	ENSMUST00000236047	retained_intron		17	1	26118165	1707
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000218780	protein_coding		10	-1	53647698	477
ENSMUSG00000028703	protein_coding	Lrrc41	ENSMUST00000134983	processed_transcript		4	1	116089482	526
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000217939	protein_coding		10	-1	53649164	716
ENSMUSG00000081041	processed_pseudogene	Nlk-ps1	ENSMUST00000120843	processed_pseudogene		2	-1	87167315	1230
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000218659	nonsense_mediated_decay		10	-1	53655099	1926
ENSMUSG00000042345	protein_coding	Ubash3a	ENSMUST00000144772	nonsense_mediated_decay		17	1	31208080	668
ENSMUSG00000017309	protein_coding	Cd300lg	ENSMUST00000107163	protein_coding	alternative2	11	1	102041509	2605
ENSMUSG00000021824	protein_coding	Ap3m1	ENSMUST00000130291	protein_coding		14	-1	21052508	579
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000171807	protein_coding		10	-1	53694823	2341
ENSMUSG00000042345	protein_coding	Ubash3a	ENSMUST00000173776	protein_coding		17	1	31208089	378
ENSMUSG00000097339	lincRNA	Gm26671	ENSMUST00000199759	lincRNA		3	-1	57625757	656
ENSMUSG00000042345	protein_coding	Ubash3a	ENSMUST00000048656	protein_coding		17	1	31208091	1695
ENSMUSG00000017309	protein_coding	Cd300lg	ENSMUST00000107164	protein_coding	alternative2	11	1	102041509	2737
ENSMUSG00000044487	protein_coding	Olfr1112	ENSMUST00000216772	protein_coding	principal1	2	1	87187798	1443
ENSMUSG00000021824	protein_coding	Ap3m1	ENSMUST00000130370	protein_coding		14	-1	21052120	673
ENSMUSG00000086065	antisense	Gm16180	ENSMUST00000128662	antisense		8	1	3259704	312
ENSMUSG00000090799	protein_coding	Klhl33	ENSMUST00000227271	protein_coding	principal1	14	-1	50897507	5513
ENSMUSG00000044487	protein_coding	Olfr1112	ENSMUST00000053050	protein_coding	principal1	2	1	87191689	957
ENSMUSG00000050323	protein_coding	Ndufaf6	ENSMUST00000126468	processed_transcript		4	-1	11076149	863
ENSMUSG00000090799	protein_coding	Klhl33	ENSMUST00000226765	retained_intron		14	-1	50897479	1819
ENSMUSG00000050323	protein_coding	Ndufaf6	ENSMUST00000124607	processed_transcript		4	-1	11076149	675
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000165986	nonsense_mediated_decay		10	-1	53655033	1548
ENSMUSG00000090799	protein_coding	Klhl33	ENSMUST00000164415	protein_coding		14	-1	50893255	1602
ENSMUSG00000050323	protein_coding	Ndufaf6	ENSMUST00000154122	processed_transcript		4	-1	11076183	528
ENSMUSG00000109578	transcribed_unprocessed_pseudogene	Gm16475	ENSMUST00000209033	transcribed_unprocessed_pseudogene		7	1	120553156	528
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000163761	protein_coding		10	-1	53699343	3276
ENSMUSG00000097339	lincRNA	Gm26671	ENSMUST00000180423	lincRNA		3	-1	57625818	1157
ENSMUSG00000109369	unprocessed_pseudogene	Vmn2r-ps88	ENSMUST00000209168	unprocessed_pseudogene		8	1	3139098	871
ENSMUSG00000042345	protein_coding	Ubash3a	ENSMUST00000151620	processed_transcript		17	1	31212113	2539
ENSMUSG00000050323	protein_coding	Ndufaf6	ENSMUST00000148127	processed_transcript		4	-1	11076205	352
ENSMUSG00000090799	protein_coding	Klhl33	ENSMUST00000170855	protein_coding		14	-1	50897456	1422
ENSMUSG00000108039	processed_pseudogene	Gm43925	ENSMUST00000203498	processed_pseudogene		6	-1	140784704	206
ENSMUSG00000109578	transcribed_unprocessed_pseudogene	Gm16475	ENSMUST00000207306	processed_transcript		7	1	120556315	512
ENSMUSG00000042345	protein_coding	Ubash3a	ENSMUST00000147686	processed_transcript		17	1	31212297	468
ENSMUSG00000097339	lincRNA	Gm26671	ENSMUST00000197649	lincRNA		3	-1	57625788	689
ENSMUSG00000025145	protein_coding	Lrrc45	ENSMUST00000026139	protein_coding	principal1	11	1	120713925	2492
ENSMUSG00000098006	processed_pseudogene	Gm8565	ENSMUST00000183259	processed_pseudogene		3	-1	69567464	1014
ENSMUSG00000050323	protein_coding	Ndufaf6	ENSMUST00000141019	processed_transcript		4	-1	11076188	461
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000169866	protein_coding		10	-1	53647080	501
ENSMUSG00000042345	protein_coding	Ubash3a	ENSMUST00000236599	retained_intron		17	1	31213311	1061
ENSMUSG00000097339	lincRNA	Gm26671	ENSMUST00000199419	lincRNA		3	-1	57625824	178
ENSMUSG00000042345	protein_coding	Ubash3a	ENSMUST00000235375	retained_intron		17	1	31219601	2552
ENSMUSG00000104965	TEC	Gm43437	ENSMUST00000198535	TEC		3	-1	57640837	3955
ENSMUSG00000042345	protein_coding	Ubash3a	ENSMUST00000237216	protein_coding		17	1	31235483	740
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000164393	protein_coding		10	-1	53638269	210
ENSMUSG00000103812	lincRNA	Gm33954	ENSMUST00000195188	lincRNA		Y	-1	22923358	1500
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000218682	protein_coding		10	-1	53675230	1837
ENSMUSG00000005534	protein_coding	Insr	ENSMUST00000208839	nonsense_mediated_decay		8	-1	3159555	551
ENSMUSG00000108911	processed_pseudogene	Gm45113	ENSMUST00000207518	processed_pseudogene		7	1	120624249	165
ENSMUSG00000025145	protein_coding	Lrrc45	ENSMUST00000145781	nonsense_mediated_decay		11	1	120713951	2390
ENSMUSG00000103812	lincRNA	Gm33954	ENSMUST00000195499	lincRNA		Y	-1	22922904	438
ENSMUSG00000103812	lincRNA	Gm33954	ENSMUST00000191879	lincRNA		Y	-1	22922904	622
ENSMUSG00000025145	protein_coding	Lrrc45	ENSMUST00000151852	protein_coding		11	1	120713978	704
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000168949	processed_transcript		10	-1	53679054	1664
ENSMUSG00000043300	protein_coding	B3galnt1	ENSMUST00000061826	protein_coding	principal1	3	-1	69598960	2028
ENSMUSG00000104259	lincRNA	Gm37538	ENSMUST00000192417	lincRNA		Y	1	22955350	2168
ENSMUSG00000109113	lincRNA	Gm32916	ENSMUST00000208033	lincRNA		7	1	120593151	789
ENSMUSG00000019856	protein_coding	Fam184a	ENSMUST00000170839	retained_intron		10	-1	53750909	1315
ENSMUSG00000109113	lincRNA	Gm32916	ENSMUST00000207903	lincRNA		7	1	120611600	1038
ENSMUSG00000025145	protein_coding	Lrrc45	ENSMUST00000150225	retained_intron		11	1	120717515	1139
ENSMUSG00000116835	processed_pseudogene	Gm49594	ENSMUST00000231993	processed_pseudogene		16	-1	34007457	615
ENSMUSG00000102487	unprocessed_pseudogene	Gm21871	ENSMUST00000194621	unprocessed_pseudogene		Y	1	22964787	696
ENSMUSG00000102847	unprocessed_pseudogene	Gm34274	ENSMUST00000195825	unprocessed_pseudogene		Y	1	23001659	615
ENSMUSG00000086851	processed_transcript	A430108G06Rik	ENSMUST00000155165	processed_transcript		11	-1	53567305	1359
ENSMUSG00000109113	lincRNA	Gm32916	ENSMUST00000207884	lincRNA		7	1	120615619	935
ENSMUSG00000025145	protein_coding	Lrrc45	ENSMUST00000155187	retained_intron		11	1	120719731	898
ENSMUSG00000090219	protein_coding	4930516K23Rik	ENSMUST00000074064	protein_coding	principal1	7	-1	104061445	6133
ENSMUSG00000028347	protein_coding	Tmeff1	ENSMUST00000030032	protein_coding	principal1	4	1	48585174	2461
ENSMUSG00000044141	processed_pseudogene	E130201H02Rik	ENSMUST00000123576	processed_pseudogene		7	1	120597625	851
ENSMUSG00000086851	processed_transcript	A430108G06Rik	ENSMUST00000153461	processed_transcript		11	-1	53567313	1428
ENSMUSG00000103773	lincRNA	Gm34217	ENSMUST00000193562	lincRNA		Y	-1	23014950	356
ENSMUSG00000109304	TEC	Gm45112	ENSMUST00000208576	TEC		7	-1	120634886	5125
ENSMUSG00000090219	protein_coding	4930516K23Rik	ENSMUST00000217217	protein_coding	principal1	7	-1	104059600	945
ENSMUSG00000040985	protein_coding	Sun3	ENSMUST00000102909	protein_coding	principal3	11	-1	9048991	1205
ENSMUSG00000102347	unprocessed_pseudogene	Gm21469	ENSMUST00000193164	unprocessed_pseudogene		Y	1	23031235	696
ENSMUSG00000066262	protein_coding	Olfr640	ENSMUST00000218535	protein_coding	principal1	7	-1	104025573	4009
ENSMUSG00000028347	protein_coding	Tmeff1	ENSMUST00000123476	protein_coding	principal1	4	1	48585365	1224
ENSMUSG00000025375	protein_coding	Aatk	ENSMUST00000142959	processed_transcript		11	-1	120012408	4886
ENSMUSG00000066262	protein_coding	Olfr640	ENSMUST00000084799	protein_coding	principal1	7	-1	104022316	945
ENSMUSG00000039065	protein_coding	Atpsckmt	ENSMUST00000160146	processed_transcript		15	1	31601852	4655
ENSMUSG00000073931	protein_coding	Olfr646	ENSMUST00000214291	processed_transcript		7	1	104104873	3115
ENSMUSG00000086765	lincRNA	Gm11827	ENSMUST00000151138	lincRNA		4	1	11122805	1112
ENSMUSG00000040985	protein_coding	Sun3	ENSMUST00000043377	protein_coding	alternative2	11	-1	9039589	1176
ENSMUSG00000073931	protein_coding	Olfr646	ENSMUST00000214099	protein_coding	principal1	7	1	104104873	3778
ENSMUSG00000086765	lincRNA	Gm11827	ENSMUST00000142297	lincRNA		4	1	11123958	1257
ENSMUSG00000028347	protein_coding	Tmeff1	ENSMUST00000130834	protein_coding		4	1	48585551	1426
ENSMUSG00000117529	lincRNA	Gm49978	ENSMUST00000234689	lincRNA		18	-1	27706567	1045
ENSMUSG00000073931	protein_coding	Olfr646	ENSMUST00000098182	protein_coding	principal1	7	1	104106281	939
ENSMUSG00000028347	protein_coding	Tmeff1	ENSMUST00000141720	protein_coding		4	1	48636934	489
ENSMUSG00000053749	processed_transcript	Gm9920	ENSMUST00000110230	bidirectional_promoter_lncRNA		15	-1	55113582	935
ENSMUSG00000117529	lincRNA	Gm49978	ENSMUST00000234608	lincRNA		18	-1	27706672	659
ENSMUSG00000094063	protein_coding	Olfr638	ENSMUST00000218325	protein_coding	principal1	7	1	103998746	1158
ENSMUSG00000111102	lincRNA	Gm48189	ENSMUST00000215135	lincRNA		10	1	21100560	794
ENSMUSG00000053749	processed_transcript	Gm9920	ENSMUST00000100659	bidirectional_promoter_lncRNA		15	-1	55113460	503
ENSMUSG00000020467	protein_coding	Efemp1	ENSMUST00000020759	protein_coding	principal1	11	1	28853204	2037
ENSMUSG00000053749	processed_transcript	Gm9920	ENSMUST00000148544	processed_transcript		15	-1	55113677	2752
ENSMUSG00000113705	processed_pseudogene	Gm48411	ENSMUST00000223042	processed_pseudogene		12	1	18725260	154
ENSMUSG00000053749	processed_transcript	Gm9920	ENSMUST00000137301	bidirectional_promoter_lncRNA		15	-1	55113460	855
ENSMUSG00000117467	lincRNA	Gm33674	ENSMUST00000234286	lincRNA		18	1	27809732	863
ENSMUSG00000094063	protein_coding	Olfr638	ENSMUST00000209757	protein_coding		7	1	104003259	966
ENSMUSG00000020467	protein_coding	Efemp1	ENSMUST00000139713	protein_coding		11	1	28915667	1021
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000235822	protein_coding	principal1	18	1	65579912	6708
ENSMUSG00000117416	processed_pseudogene	Gm5064	ENSMUST00000234906	processed_pseudogene		18	-1	28188817	1708
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000145596	protein_coding	alternative2	14	-1	24004859	12094
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000049016	protein_coding		18	1	65580230	5503
ENSMUSG00000036513	protein_coding	Commd2	ENSMUST00000160959	protein_coding	principal1	3	-1	57651715	2992
ENSMUSG00000020467	protein_coding	Efemp1	ENSMUST00000124103	processed_transcript		11	1	28853244	778
ENSMUSG00000051340	protein_coding	Olfr645	ENSMUST00000057104	protein_coding	principal1	7	-1	104085465	3677
ENSMUSG00000026427	protein_coding	Eif2d	ENSMUST00000139468	retained_intron		1	1	131153181	1238
ENSMUSG00000029911	protein_coding	Ssbp1	ENSMUST00000114779	protein_coding	principal1	6	1	40471352	4398
ENSMUSG00000066263	protein_coding	Olfr639	ENSMUST00000215653	protein_coding	principal1	7	-1	104017303	6570
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000236694	processed_transcript		18	1	65580275	331
ENSMUSG00000095973	protein_coding	Vmn1r116	ENSMUST00000164288	protein_coding	principal1	7	1	20872256	924
ENSMUSG00000039065	protein_coding	Atpsckmt	ENSMUST00000042702	protein_coding	principal2	15	1	31602118	1164
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000235493	protein_coding	principal1	18	1	65580282	5358
ENSMUSG00000036513	protein_coding	Commd2	ENSMUST00000041954	nonsense_mediated_decay		3	-1	57651708	892
ENSMUSG00000066263	protein_coding	Olfr639	ENSMUST00000106862	protein_coding	principal1	7	-1	104012750	1020
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000183236	protein_coding		18	1	65580382	665
ENSMUSG00000036513	protein_coding	Commd2	ENSMUST00000163087	retained_intron		3	-1	57651715	527
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000182852	protein_coding	principal1	18	1	65580845	5757
ENSMUSG00000039065	protein_coding	Atpsckmt	ENSMUST00000161061	protein_coding	alternative2	15	1	31602118	2364
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000236633	protein_coding		18	1	65580969	544
ENSMUSG00000029911	protein_coding	Ssbp1	ENSMUST00000031971	protein_coding		6	1	40471415	1063
ENSMUSG00000055643	protein_coding	Ubqln5	ENSMUST00000053743	protein_coding	principal1	7	-1	104129826	1915
ENSMUSG00000114995	TEC	Gm49284	ENSMUST00000227896	TEC		15	1	31621972	2064
ENSMUSG00000005534	protein_coding	Insr	ENSMUST00000091291	protein_coding	principal1	8	-1	3279617	9355
ENSMUSG00000115188	processed_pseudogene	Gm46522	ENSMUST00000227734	processed_pseudogene		15	-1	31655566	797
ENSMUSG00000029911	protein_coding	Ssbp1	ENSMUST00000201570	retained_intron		6	1	40471453	2837
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000182319	protein_coding		18	1	65581020	508
ENSMUSG00000115589	processed_pseudogene	Gm18003	ENSMUST00000228855	processed_pseudogene		15	-1	31733638	2397
ENSMUSG00000029911	protein_coding	Ssbp1	ENSMUST00000121360	protein_coding	principal1	6	1	40471468	1188
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000182140	protein_coding		18	1	65581087	736
ENSMUSG00000005534	protein_coding	Insr	ENSMUST00000207100	protein_coding		8	-1	3192717	672
ENSMUSG00000049797	protein_coding	Olfr642	ENSMUST00000214299	protein_coding	principal1	7	-1	104052666	4715
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000237714	protein_coding	principal1	18	1	65581444	4460
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000237931	protein_coding		18	1	65581446	490
ENSMUSG00000029911	protein_coding	Ssbp1	ENSMUST00000117411	protein_coding	principal1	6	1	40471475	933
ENSMUSG00000005534	protein_coding	Insr	ENSMUST00000207295	retained_intron		8	-1	3181851	4019
ENSMUSG00000049797	protein_coding	Olfr642	ENSMUST00000052660	protein_coding	principal1	7	-1	104050352	945
ENSMUSG00000062075	protein_coding	Lmnb2	ENSMUST00000057623	protein_coding	alternative2	10	-1	80918245	3531
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000182979	protein_coding		18	1	65581742	2618
ENSMUSG00000029911	protein_coding	Ssbp1	ENSMUST00000117830	protein_coding		6	1	40471526	579
ENSMUSG00000005534	protein_coding	Insr	ENSMUST00000139504	retained_intron		8	-1	3279551	1675
ENSMUSG00000050310	protein_coding	Rictor	ENSMUST00000228918	retained_intron		15	1	6708379	1211
ENSMUSG00000062075	protein_coding	Lmnb2	ENSMUST00000105332	protein_coding		10	-1	80906412	1643
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000237553	protein_coding	principal1	18	1	65582085	5175
ENSMUSG00000029911	protein_coding	Ssbp1	ENSMUST00000141801	retained_intron		6	1	40476479	732
ENSMUSG00000050945	protein_coding	Zfp438	ENSMUST00000063989	protein_coding	principal1	18	-1	5334439	3211
ENSMUSG00000062075	protein_coding	Lmnb2	ENSMUST00000159094	processed_transcript		10	-1	80917851	469
ENSMUSG00000109824	protein_coding	Olfr643	ENSMUST00000138055	nonsense_mediated_decay	principal1	7	-1	104137405	1078
ENSMUSG00000050310	protein_coding	Rictor	ENSMUST00000226201	retained_intron		15	1	6708381	2633
ENSMUSG00000050945	protein_coding	Zfp438	ENSMUST00000234241	protein_coding	principal1	18	-1	5334807	3112
ENSMUSG00000062075	protein_coding	Lmnb2	ENSMUST00000179022	protein_coding	principal2	10	-1	80918245	3370
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000237712	protein_coding		18	1	65582233	980
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000188285	protein_coding	principal4	14	-1	24004205	4440
ENSMUSG00000073932	protein_coding	Olfr641	ENSMUST00000213214	protein_coding	principal1	7	1	104035445	2379
ENSMUSG00000050310	protein_coding	Rictor	ENSMUST00000226181	retained_intron		15	1	6708381	4695
ENSMUSG00000050945	protein_coding	Zfp438	ENSMUST00000234411	retained_intron		18	-1	5334413	953
ENSMUSG00000073932	protein_coding	Olfr641	ENSMUST00000213904	processed_transcript		7	1	104035448	2100
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000182684	protein_coding		18	1	65582239	906
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000235669	protein_coding		18	1	65582289	581
ENSMUSG00000073932	protein_coding	Olfr641	ENSMUST00000098183	protein_coding	principal1	7	1	104039798	939
ENSMUSG00000104480	unprocessed_pseudogene	Gm21661	ENSMUST00000194101	unprocessed_pseudogene		Y	1	23097865	696
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000183319	protein_coding		18	1	65582294	354
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000236523	protein_coding		18	1	65582300	554
ENSMUSG00000041293	protein_coding	Adgrf1	ENSMUST00000047399	protein_coding	principal1	17	1	43270329	3853
ENSMUSG00000083025	processed_pseudogene	Gm11829	ENSMUST00000121003	processed_pseudogene		4	1	11133327	282
ENSMUSG00000110012	protein_coding	Olfr644	ENSMUST00000213184	protein_coding	principal1	7	-1	104071869	3572
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000237886	protein_coding		18	1	65582306	588
ENSMUSG00000110012	protein_coding	Olfr644	ENSMUST00000213991	protein_coding	principal1	7	-1	104071869	3506
ENSMUSG00000015714	protein_coding	Cers2	ENSMUST00000129267	protein_coding		3	1	95314791	775
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000225431	protein_coding		14	-1	24003930	3498
ENSMUSG00000023906	protein_coding	Cldn6	ENSMUST00000024699	protein_coding	principal1	17	1	23679249	1622
ENSMUSG00000074024	bidirectional_promoter_lncRNA	4632427E13Rik	ENSMUST00000147198	bidirectional_promoter_lncRNA		7	-1	92741459	6559
ENSMUSG00000050310	protein_coding	Rictor	ENSMUST00000228266	retained_intron		15	1	6708381	3879
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000188210	protein_coding		14	-1	24003930	3579
ENSMUSG00000024277	protein_coding	Mapre2	ENSMUST00000132286	retained_intron		18	1	23752333	2169
ENSMUSG00000110012	protein_coding	Olfr644	ENSMUST00000077417	protein_coding	principal1	7	-1	104069155	1071
ENSMUSG00000056281	protein_coding	Olfr1322	ENSMUST00000217355	protein_coding	principal1	X	-1	49891483	3886
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000224787	protein_coding		14	-1	24003930	3348
ENSMUSG00000056281	protein_coding	Olfr1322	ENSMUST00000070304	protein_coding	principal1	X	-1	49886401	933
ENSMUSG00000023906	protein_coding	Cldn6	ENSMUST00000232719	protein_coding	principal1	17	1	23679372	1431
ENSMUSG00000074024	bidirectional_promoter_lncRNA	4632427E13Rik	ENSMUST00000182578	bidirectional_promoter_lncRNA		7	-1	92741468	3832
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000182478	nonsense_mediated_decay		18	1	65582418	5471
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000224025	protein_coding		14	-1	24003977	3557
ENSMUSG00000074024	bidirectional_promoter_lncRNA	4632427E13Rik	ENSMUST00000182408	bidirectional_promoter_lncRNA		7	-1	92741459	669
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000190044	protein_coding	alternative2	14	-1	24004205	3747
ENSMUSG00000074024	bidirectional_promoter_lncRNA	4632427E13Rik	ENSMUST00000098305	bidirectional_promoter_lncRNA		7	-1	92741468	3811
ENSMUSG00000083399	processed_pseudogene	Gm15033	ENSMUST00000118188	processed_pseudogene		X	1	49944635	673
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000183326	protein_coding		18	1	65582613	454
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000182655	protein_coding		18	1	65583415	358
ENSMUSG00000023906	protein_coding	Cldn6	ENSMUST00000233364	protein_coding	principal1	17	1	23679659	1078
ENSMUSG00000019838	protein_coding	Slc16a10	ENSMUST00000092566	protein_coding	principal1	10	-1	40142254	5397
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000182973	protein_coding		18	1	65583937	322
ENSMUSG00000033498	protein_coding	Strc	ENSMUST00000038389	protein_coding	principal1	2	-1	121380940	5756
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000225315	protein_coding		14	-1	24003930	3429
ENSMUSG00000004609	protein_coding	Cd33	ENSMUST00000205503	protein_coding	principal3	7	-1	43533171	5728
ENSMUSG00000019838	protein_coding	Slc16a10	ENSMUST00000213827	protein_coding		10	-1	40076605	553
ENSMUSG00000019838	protein_coding	Slc16a10	ENSMUST00000213488	protein_coding		10	-1	40142255	2325
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000237756	nonsense_mediated_decay		18	1	65625138	3580
ENSMUSG00000015714	protein_coding	Cers2	ENSMUST00000015858	protein_coding	principal1	3	1	95315084	2216
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000183184	retained_intron		18	1	65625240	790
ENSMUSG00000033498	protein_coding	Strc	ENSMUST00000129136	nonsense_mediated_decay		2	-1	121375031	1059
ENSMUSG00000019838	protein_coding	Slc16a10	ENSMUST00000217252	processed_transcript		10	-1	40142258	1306
ENSMUSG00000018672	protein_coding	Copz2	ENSMUST00000155696	retained_intron		11	1	96849870	1045
ENSMUSG00000004609	protein_coding	Cd33	ENSMUST00000004728	protein_coding	alternative2	7	-1	43533101	1962
ENSMUSG00000085688	antisense	Gm15395	ENSMUST00000153724	antisense		8	1	117036497	702
ENSMUSG00000015714	protein_coding	Cers2	ENSMUST00000133748	retained_intron		3	1	95315247	811
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000183303	processed_transcript		18	1	65646893	805
ENSMUSG00000033498	protein_coding	Strc	ENSMUST00000134443	processed_transcript		2	-1	121375015	566
ENSMUSG00000042439	protein_coding	Zfp532	ENSMUST00000169679	protein_coding		18	1	65582526	5003
ENSMUSG00000033498	protein_coding	Strc	ENSMUST00000150332	retained_intron		2	-1	121374789	468
ENSMUSG00000004609	protein_coding	Cd33	ENSMUST00000039861	protein_coding	principal3	7	-1	43544428	1791
ENSMUSG00000015714	protein_coding	Cers2	ENSMUST00000154055	retained_intron		3	1	95315267	624
ENSMUSG00000118234	antisense	Gm50115	ENSMUST00000183157	antisense		18	-1	65624926	5267
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000031072	protein_coding	principal1	5	1	52834012	3854
ENSMUSG00000015714	protein_coding	Cers2	ENSMUST00000156850	retained_intron		3	1	95317350	583
ENSMUSG00000004609	protein_coding	Cd33	ENSMUST00000206371	protein_coding		7	-1	43532678	933
ENSMUSG00000033498	protein_coding	Strc	ENSMUST00000149219	retained_intron		2	-1	121387168	2067
ENSMUSG00000015714	protein_coding	Cers2	ENSMUST00000139498	protein_coding		3	1	95318021	495
ENSMUSG00000004609	protein_coding	Cd33	ENSMUST00000205687	retained_intron		7	-1	43533087	2376
ENSMUSG00000015714	protein_coding	Cers2	ENSMUST00000139866	protein_coding		3	1	95318792	900
ENSMUSG00000117775	sense_intronic	Gm50462	ENSMUST00000237947	sense_intronic		18	1	65634793	2678
ENSMUSG00000004609	protein_coding	Cd33	ENSMUST00000206977	processed_transcript		7	-1	43532954	402
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000225794	nonsense_mediated_decay		14	-1	24003930	3434
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000225556	protein_coding		14	-1	24003930	3360
ENSMUSG00000106031	processed_pseudogene	Gm8848	ENSMUST00000197270	processed_pseudogene		6	-1	70369800	1343
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000190985	nonsense_mediated_decay		14	-1	24003930	3429
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000223727	protein_coding		14	-1	24003930	3339
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000223655	protein_coding		14	-1	24003930	3528
ENSMUSG00000015714	protein_coding	Cers2	ENSMUST00000134702	retained_intron		3	1	95320133	1524
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000224077	protein_coding	alternative2	14	-1	24003930	3537
ENSMUSG00000015714	protein_coding	Cers2	ENSMUST00000142398	retained_intron		3	1	95320940	855
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000188991	protein_coding	alternative2	14	-1	24004125	3711
ENSMUSG00000103900	TEC	Gm37500	ENSMUST00000192059	TEC		3	1	95356130	1443
ENSMUSG00000071451	protein_coding	Psmg4	ENSMUST00000124996	protein_coding		13	1	34162964	474
ENSMUSG00000095794	IG_V_gene	Igkv6-17	ENSMUST00000103391	IG_V_gene	principal1	6	1	70371439	377
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000224468	protein_coding	alternative2	14	-1	24004149	3753
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000144778	retained_intron		11	-1	3193439	4289
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000126746	nonsense_mediated_decay		11	-1	3164597	2596
ENSMUSG00000075316	protein_coding	Scn9a	ENSMUST00000100064	protein_coding	principal2	2	-1	66634952	9840
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000144359	retained_intron		11	-1	3193411	3706
ENSMUSG00000071451	protein_coding	Psmg4	ENSMUST00000147632	protein_coding	principal1	13	1	34162964	555
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000132893	nonsense_mediated_decay		11	-1	3193460	2500
ENSMUSG00000075316	protein_coding	Scn9a	ENSMUST00000112354	protein_coding	alternative2	2	-1	66634653	6471
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000137633	retained_intron		11	-1	3142378	2969
ENSMUSG00000075316	protein_coding	Scn9a	ENSMUST00000151234	retained_intron		2	-1	66543175	762
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000138126	retained_intron		11	-1	3193421	2916
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000133882	processed_transcript		11	-1	3146356	447
ENSMUSG00000018672	protein_coding	Copz2	ENSMUST00000018816	protein_coding	principal1	11	1	96849876	930
ENSMUSG00000075316	protein_coding	Scn9a	ENSMUST00000141603	retained_intron		2	-1	66634962	3642
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000146888	retained_intron		11	-1	3146722	733
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000224812	protein_coding		14	-1	24003930	3441
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000141422	processed_transcript		11	-1	3177493	457
ENSMUSG00000018672	protein_coding	Copz2	ENSMUST00000145633	nonsense_mediated_decay		11	1	96849881	407
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000224285	protein_coding		14	-1	24003930	3342
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000156655	processed_transcript		11	-1	3170704	342
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000225471	protein_coding		14	-1	24003930	3429
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000143442	processed_transcript		11	-1	3176466	490
ENSMUSG00000018672	protein_coding	Copz2	ENSMUST00000154191	retained_intron		11	1	96853900	653
ENSMUSG00000033184	protein_coding	Tmed7	ENSMUST00000036030	protein_coding		18	-1	46597314	1436
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000224232	protein_coding		14	-1	24003930	3516
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000223749	protein_coding		14	-1	24003930	3342
ENSMUSG00000033184	protein_coding	Tmed7	ENSMUST00000143178	retained_intron		18	-1	46597516	7982
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000079360	protein_coding		19	-1	57216032	7152
ENSMUSG00000075316	protein_coding	Scn9a	ENSMUST00000164384	protein_coding	alternative2	2	-1	66634653	7530
ENSMUSG00000035933	protein_coding	Cog5	ENSMUST00000036862	protein_coding	principal1	12	1	31654869	2997
ENSMUSG00000018672	protein_coding	Copz2	ENSMUST00000147710	nonsense_mediated_decay		11	1	96854131	581
ENSMUSG00000015697	protein_coding	Setdb1	ENSMUST00000124638	retained_intron		3	-1	95357155	5652
ENSMUSG00000033184	protein_coding	Tmed7	ENSMUST00000151189	protein_coding	principal1	18	-1	46597535	1348
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000142315	protein_coding		11	-1	3193424	914
ENSMUSG00000022419	protein_coding	Deptor	ENSMUST00000096433	protein_coding	principal1	15	1	55112317	8547
ENSMUSG00000035933	protein_coding	Cog5	ENSMUST00000219672	retained_intron		12	1	31894121	750
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000155763	protein_coding	alternative2	11	-1	3187355	455
ENSMUSG00000000308	protein_coding	Ckmt1	ENSMUST00000125812	protein_coding		2	1	121357714	850
ENSMUSG00000022419	protein_coding	Deptor	ENSMUST00000100660	protein_coding		15	1	55112424	1377
ENSMUSG00000075316	protein_coding	Scn9a	ENSMUST00000100063	protein_coding	alternative2	2	-1	66634952	9813
ENSMUSG00000023764	protein_coding	Sfi1	ENSMUST00000118627	protein_coding	alternative2	11	-1	3193424	831
ENSMUSG00000075316	protein_coding	Scn9a	ENSMUST00000169900	protein_coding	alternative2	2	-1	66634653	7497
ENSMUSG00000035933	protein_coding	Cog5	ENSMUST00000218428	protein_coding		12	1	31919673	3610
ENSMUSG00000056130	protein_coding	Ticam2	ENSMUST00000070084	protein_coding	principal1	18	-1	46574533	4204
ENSMUSG00000081307	processed_pseudogene	Gm13627	ENSMUST00000119700	processed_pseudogene		2	-1	66530746	706
ENSMUSG00000035933	protein_coding	Cog5	ENSMUST00000219837	nonsense_mediated_decay		12	1	31925694	372
ENSMUSG00000022419	protein_coding	Deptor	ENSMUST00000023056	protein_coding		15	1	55133436	3300
ENSMUSG00000056130	protein_coding	Ticam2	ENSMUST00000149929	retained_intron		18	-1	46574533	2010
ENSMUSG00000111987	antisense	Gm48809	ENSMUST00000220137	antisense		12	-1	31849626	2225
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000025137	protein_coding	principal1	18	1	9957906	4134
ENSMUSG00000112779	processed_pseudogene	Gm18029	ENSMUST00000219973	processed_pseudogene		12	1	31748059	844
ENSMUSG00000087301	antisense	Gm13629	ENSMUST00000141149	antisense		2	1	66440880	1022
ENSMUSG00000022419	protein_coding	Deptor	ENSMUST00000226687	nonsense_mediated_decay		15	1	55133453	693
ENSMUSG00000110781	lincRNA	Gm31992	ENSMUST00000213387	lincRNA		10	1	40164110	862
ENSMUSG00000087301	antisense	Gm13629	ENSMUST00000152740	antisense		2	1	66440896	645
ENSMUSG00000102342	processed_pseudogene	Gm37380	ENSMUST00000193752	processed_pseudogene		3	1	69661766	397
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000030785	protein_coding	principal2	4	-1	152152207	3406
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000144574	nonsense_mediated_decay		5	1	52834126	2758
ENSMUSG00000080855	processed_pseudogene	Rpl35-ps1	ENSMUST00000118070	processed_pseudogene		2	-1	66447407	372
ENSMUSG00000068969	processed_pseudogene	Rpl32-ps	ENSMUST00000091052	processed_pseudogene		3	-1	69717393	408
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000130536	retained_intron		5	1	52842713	560
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000212542	processed_transcript		14	-1	23554798	1600
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000198207	protein_coding		5	1	52842829	512
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000105659	protein_coding	alternative2	4	-1	152152371	3595
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000226051	protein_coding		14	-1	24014491	1641
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000150682	protein_coding		5	1	52842842	453
ENSMUSG00000044067	protein_coding	Gpr22	ENSMUST00000057783	protein_coding	principal1	12	-1	31713926	4587
ENSMUSG00000047746	protein_coding	Fbxo40	ENSMUST00000075869	protein_coding	principal1	16	-1	36990467	5137
ENSMUSG00000028348	protein_coding	Cavin4	ENSMUST00000030033	protein_coding	principal1	4	1	48663514	2054
ENSMUSG00000104701	lincRNA	Gm42555	ENSMUST00000199304	lincRNA		5	-1	43808743	1039
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000141641	retained_intron		5	1	52847557	600
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000142035	retained_intron		5	1	52850143	739
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000111529	protein_coding		19	-1	57119009	5927
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000199850	retained_intron		5	1	52855347	506
ENSMUSG00000047746	protein_coding	Fbxo40	ENSMUST00000132511	processed_transcript		16	-1	36978776	383
ENSMUSG00000111045	lincRNA	Gm47598	ENSMUST00000214034	lincRNA		10	-1	40183692	3036
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234423	retained_intron		18	1	9958163	680
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000154980	retained_intron		5	1	52859059	801
ENSMUSG00000034416	protein_coding	Pkd1l2	ENSMUST00000109093	protein_coding	alternative2	8	-1	117082449	7389
ENSMUSG00000047746	protein_coding	Fbxo40	ENSMUST00000127808	retained_intron		16	-1	36970765	2185
ENSMUSG00000031860	protein_coding	Pbx4	ENSMUST00000081503	protein_coding	principal1	8	1	69832491	1560
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000224933	processed_transcript		14	-1	23733024	2705
ENSMUSG00000044067	protein_coding	Gpr22	ENSMUST00000176710	protein_coding	principal1	12	-1	31713947	1772
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000131750	retained_intron		5	1	52860913	857
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000099294	protein_coding	alternative2	19	-1	57197631	6232
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000212576	protein_coding		14	-1	23554798	1217
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000145349	retained_intron		5	1	52861155	640
ENSMUSG00000031860	protein_coding	Pbx4	ENSMUST00000151975	retained_intron		8	1	69832624	547
ENSMUSG00000047746	protein_coding	Fbxo40	ENSMUST00000114806	protein_coding	principal1	16	-1	36979136	2518
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000111559	protein_coding		19	-1	57239329	3184
ENSMUSG00000044067	protein_coding	Gpr22	ENSMUST00000174480	protein_coding		12	-1	31713933	874
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000111528	protein_coding		19	-1	57119007	2481
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000223847	retained_intron		14	-1	23543286	2133
ENSMUSG00000029176	protein_coding	Anapc4	ENSMUST00000138629	retained_intron		5	1	52865613	745
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000111526	protein_coding		19	-1	57118913	2164
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234890	retained_intron		18	1	9958177	891
ENSMUSG00000044067	protein_coding	Gpr22	ENSMUST00000236002	protein_coding		12	-1	31713926	4581
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000225305	processed_transcript		14	-1	23733024	732
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000224465	processed_transcript		14	-1	23732124	447
ENSMUSG00000034416	protein_coding	Pkd1l2	ENSMUST00000162080	retained_intron		8	-1	117024095	1716
ENSMUSG00000115561	TEC	Gm49285	ENSMUST00000227417	TEC		15	1	32049951	1403
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234805	retained_intron		18	1	9958180	2047
ENSMUSG00000112033	processed_pseudogene	Gm48808	ENSMUST00000218894	processed_pseudogene		12	1	31747325	348
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000111550	protein_coding		19	-1	57197456	2731
ENSMUSG00000034416	protein_coding	Pkd1l2	ENSMUST00000160449	retained_intron		8	-1	117028843	1107
ENSMUSG00000116773	processed_pseudogene	Gm49605	ENSMUST00000232121	processed_pseudogene		16	1	36996627	415
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234622	retained_intron		18	1	9958239	2303
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000190339	protein_coding		14	-1	24004298	890
ENSMUSG00000034416	protein_coding	Pkd1l2	ENSMUST00000098375	protein_coding	principal2	8	-1	117082449	7386
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000111558	protein_coding		19	-1	57239861	3123
ENSMUSG00000066720	protein_coding	Cldn9	ENSMUST00000085989	protein_coding	principal1	17	-1	23684026	1443
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000111555	protein_coding		19	-1	57215965	2562
ENSMUSG00000049164	protein_coding	Zfp518a	ENSMUST00000235235	processed_transcript		19	1	40894705	1345
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000065788	protein_coding		14	-1	23803304	4524
ENSMUSG00000114605	TEC	C130051F05Rik	ENSMUST00000225844	TEC		13	1	78112482	3838
ENSMUSG00000049164	protein_coding	Zfp518a	ENSMUST00000235207	protein_coding	principal1	19	1	40908159	6568
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000111546	protein_coding	principal3	19	-1	57197391	2267
ENSMUSG00000114401	antisense	Gm38604	ENSMUST00000224734	antisense		13	-1	78183159	1219
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234324	retained_intron		18	1	9960842	2437
ENSMUSG00000000308	protein_coding	Ckmt1	ENSMUST00000078222	protein_coding	principal1	2	1	121357776	1518
ENSMUSG00000114401	antisense	Gm38604	ENSMUST00000225211	antisense		13	-1	78183168	637
ENSMUSG00000045267	protein_coding	Tas2r119	ENSMUST00000057633	protein_coding	principal1	15	1	32177289	1006
ENSMUSG00000000308	protein_coding	Ckmt1	ENSMUST00000125221	protein_coding		2	1	121357840	565
ENSMUSG00000049164	protein_coding	Zfp518a	ENSMUST00000050092	protein_coding	principal1	19	1	40894705	6840
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000100831	protein_coding		14	-1	23803304	3261
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000049305	protein_coding		4	-1	152128925	1142
ENSMUSG00000093668	protein_coding	Pou5f2	ENSMUST00000175955	protein_coding	principal1	13	1	78024902	1394
ENSMUSG00000118572	processed_pseudogene	AC122821.1	ENSMUST00000239094	processed_pseudogene		17	-1	23700113	615
ENSMUSG00000000308	protein_coding	Ckmt1	ENSMUST00000150271	protein_coding		2	1	121357907	851
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000111544	protein_coding		19	-1	57197496	2231
ENSMUSG00000080756	processed_pseudogene	Gm12633	ENSMUST00000117742	processed_pseudogene		4	-1	90361326	1705
ENSMUSG00000114622	processed_pseudogene	Gm18990	ENSMUST00000225009	processed_pseudogene		13	1	78121070	1649
ENSMUSG00000107924	lincRNA	4930518I17Rik	ENSMUST00000203902	lincRNA		15	1	32226385	656
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000074983	protein_coding	alternative2	14	-1	23803304	3974
ENSMUSG00000114812	processed_pseudogene	Gm48254	ENSMUST00000224621	processed_pseudogene		13	1	78079388	469
ENSMUSG00000082569	processed_pseudogene	Gm12634	ENSMUST00000122157	processed_pseudogene		4	1	90368731	992
ENSMUSG00000000308	protein_coding	Ckmt1	ENSMUST00000000317	protein_coding	principal1	2	1	121358610	1620
ENSMUSG00000064138	protein_coding	Fam172a	ENSMUST00000225709	processed_transcript		13	1	77702033	773
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000112423	protein_coding		14	-1	23650189	3664
ENSMUSG00000031860	protein_coding	Pbx4	ENSMUST00000156319	nonsense_mediated_decay		8	1	69832637	1101
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234901	retained_intron		18	1	9963804	1875
ENSMUSG00000000308	protein_coding	Ckmt1	ENSMUST00000126130	nonsense_mediated_decay		2	1	121358656	703
ENSMUSG00000096956	lincRNA	Snhg18	ENSMUST00000181536	lincRNA		15	-1	32244662	1486
ENSMUSG00000031860	protein_coding	Pbx4	ENSMUST00000131637	protein_coding		8	1	69832660	375
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234330	retained_intron		18	1	9963822	412
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000172099	protein_coding	alternative2	14	-1	23803304	3354
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000177634	protein_coding		14	-1	23803304	4605
ENSMUSG00000000308	protein_coding	Ckmt1	ENSMUST00000145380	retained_intron		2	1	121358659	959
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234975	protein_coding		18	1	9970255	1158
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000163322	protein_coding		14	-1	23803304	3162
ENSMUSG00000031860	protein_coding	Pbx4	ENSMUST00000132899	nonsense_mediated_decay		8	1	69832662	823
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000179836	protein_coding		14	-1	23803304	3177
ENSMUSG00000000308	protein_coding	Ckmt1	ENSMUST00000129130	protein_coding		2	1	121358666	796
ENSMUSG00000063142	protein_coding	Kcnma1	ENSMUST00000179097	protein_coding		14	-1	23803304	4596
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234600	retained_intron		18	1	9984475	547
ENSMUSG00000114803	processed_pseudogene	Gm46443	ENSMUST00000225611	processed_pseudogene		14	1	23321144	364
ENSMUSG00000100100	antisense	Gm29626	ENSMUST00000191517	antisense		14	1	23560248	425
ENSMUSG00000031860	protein_coding	Pbx4	ENSMUST00000134777	nonsense_mediated_decay		8	1	69832690	931
ENSMUSG00000100100	antisense	Gm29626	ENSMUST00000187439	antisense		14	1	23560265	296
ENSMUSG00000000308	protein_coding	Ckmt1	ENSMUST00000128612	nonsense_mediated_decay		2	1	121358844	695
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000235035	retained_intron		18	1	9986289	1039
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000105658	protein_coding	alternative2	4	-1	152152222	2815
ENSMUSG00000114953	bidirectional_promoter_lncRNA	4930519K11Rik	ENSMUST00000223609	bidirectional_promoter_lncRNA		14	1	24003844	1909
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000105653	protein_coding		4	-1	152131865	1411
ENSMUSG00000000308	protein_coding	Ckmt1	ENSMUST00000153040	retained_intron		2	1	121362918	422
ENSMUSG00000031860	protein_coding	Pbx4	ENSMUST00000132259	processed_transcript		8	1	69848039	281
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234370	retained_intron		18	1	9989698	851
ENSMUSG00000048232	protein_coding	Fbxo10	ENSMUST00000052236	protein_coding	principal1	4	-1	45084604	4635
ENSMUSG00000031860	protein_coding	Pbx4	ENSMUST00000156251	retained_intron		8	1	69866111	708
ENSMUSG00000024287	protein_coding	Thoc1	ENSMUST00000234111	retained_intron		18	1	9992778	500
ENSMUSG00000024331	protein_coding	Dsc2	ENSMUST00000075214	protein_coding	alternative2	18	-1	20059478	4508
ENSMUSG00000031860	protein_coding	Pbx4	ENSMUST00000135952	retained_intron		8	1	69866285	724
ENSMUSG00000114953	bidirectional_promoter_lncRNA	4930519K11Rik	ENSMUST00000223837	bidirectional_promoter_lncRNA		14	1	24004991	464
ENSMUSG00000048232	protein_coding	Fbxo10	ENSMUST00000140008	protein_coding		4	-1	45062004	3231
ENSMUSG00000048232	protein_coding	Fbxo10	ENSMUST00000155583	processed_transcript		4	-1	45058618	554
ENSMUSG00000108411	lincRNA	Gm44818	ENSMUST00000206608	lincRNA		7	1	43561319	358
ENSMUSG00000002057	protein_coding	Foxn1	ENSMUST00000108294	protein_coding	principal1	11	-1	78386558	3214
ENSMUSG00000043747	protein_coding	1520401A03Rik	ENSMUST00000201734	protein_coding	principal5	17	-1	23720726	2660
ENSMUSG00000044006	protein_coding	Cilp2	ENSMUST00000057831	protein_coding	principal1	8	-1	69887687	4314
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000156316	retained_intron		19	-1	57314919	3603
ENSMUSG00000022521	protein_coding	Crebbp	ENSMUST00000023165	protein_coding	principal2	16	-1	4213997	10820
ENSMUSG00000071356	protein_coding	Reg3b	ENSMUST00000204873	protein_coding		6	1	78370657	475
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000114973	protein_coding		16	-1	34095987	10438
ENSMUSG00000024331	protein_coding	Dsc2	ENSMUST00000039247	protein_coding	principal3	18	-1	20059554	4630
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000137389	processed_transcript		19	-1	57047238	759
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000132002	retained_intron		16	-1	33978726	2118
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000127198	retained_intron		19	-1	57044942	656
ENSMUSG00000024331	protein_coding	Dsc2	ENSMUST00000155407	protein_coding		18	-1	20038139	2429
ENSMUSG00000022521	protein_coding	Crebbp	ENSMUST00000205765	protein_coding	alternative2	16	-1	4213413	7749
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000133782	retained_intron		19	-1	57134708	1057
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000162412	protein_coding		13	-1	95250336	4035
ENSMUSG00000022521	protein_coding	Crebbp	ENSMUST00000191387	retained_intron		16	-1	4089743	3134
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000134430	processed_transcript		19	-1	57134677	533
ENSMUSG00000022521	protein_coding	Crebbp	ENSMUST00000205945	retained_intron		16	-1	4088595	514
ENSMUSG00000022521	protein_coding	Crebbp	ENSMUST00000206464	protein_coding		16	-1	4094644	516
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000150425	processed_transcript		19	-1	57119024	717
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000162670	protein_coding		13	-1	95034253	2363
ENSMUSG00000022521	protein_coding	Crebbp	ENSMUST00000205344	protein_coding		16	-1	4128621	3322
ENSMUSG00000071356	protein_coding	Reg3b	ENSMUST00000096904	protein_coding	principal1	6	1	78370861	783
ENSMUSG00000022521	protein_coding	Crebbp	ENSMUST00000206098	protein_coding		16	-1	4096126	381
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000128212	processed_transcript		19	-1	57135725	987
ENSMUSG00000022521	protein_coding	Crebbp	ENSMUST00000205685	protein_coding		16	-1	4126602	740
ENSMUSG00000024331	protein_coding	Dsc2	ENSMUST00000128464	nonsense_mediated_decay		18	-1	20059509	3774
ENSMUSG00000071356	protein_coding	Reg3b	ENSMUST00000203266	protein_coding		6	1	78370898	476
ENSMUSG00000103937	TEC	Gm37186	ENSMUST00000195629	TEC		16	-1	4173636	2861
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000111524	protein_coding		19	-1	57314911	1251
ENSMUSG00000101637	unprocessed_pseudogene	Gm28896	ENSMUST00000188609	unprocessed_pseudogene		Y	-1	81014087	696
ENSMUSG00000056592	protein_coding	Zfp658	ENSMUST00000107972	protein_coding	principal1	7	1	43562256	3495
ENSMUSG00000071356	protein_coding	Reg3b	ENSMUST00000204760	retained_intron		6	1	78372531	628
ENSMUSG00000081563	processed_pseudogene	Gm12635	ENSMUST00000117285	processed_pseudogene		4	1	90452874	752
ENSMUSG00000100245	unprocessed_pseudogene	Gm21282	ENSMUST00000186766	unprocessed_pseudogene		Y	-1	81204493	696
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000133369	protein_coding		19	-1	57182308	875
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000150958	processed_transcript		4	-1	152132337	2365
ENSMUSG00000082502	processed_pseudogene	Gm12636	ENSMUST00000117395	processed_pseudogene		4	-1	90544370	624
ENSMUSG00000056592	protein_coding	Zfp658	ENSMUST00000005597	protein_coding	principal1	7	1	43564784	2664
ENSMUSG00000100469	unprocessed_pseudogene	Gm28895	ENSMUST00000188733	unprocessed_pseudogene		Y	-1	81285675	696
ENSMUSG00000026450	protein_coding	Chit1	ENSMUST00000159963	protein_coding	principal1	1	1	134111242	1815
ENSMUSG00000082622	processed_pseudogene	Gm12632	ENSMUST00000121223	processed_pseudogene		4	1	90856883	495
ENSMUSG00000025085	protein_coding	Ablim1	ENSMUST00000104902	protein_coding		19	-1	57119009	5907
ENSMUSG00000100821	unprocessed_pseudogene	Gm28894	ENSMUST00000185214	unprocessed_pseudogene		Y	-1	81315113	615
ENSMUSG00000079962	processed_pseudogene	Gm12643	ENSMUST00000116078	processed_pseudogene		4	1	91037900	374
ENSMUSG00000026450	protein_coding	Chit1	ENSMUST00000160060	protein_coding		1	1	134111242	1580
ENSMUSG00000063929	protein_coding	Cyp4a32	ENSMUST00000129918	processed_transcript		4	1	115600969	736
ENSMUSG00000101058	unprocessed_pseudogene	Gm21829	ENSMUST00000188787	unprocessed_pseudogene		Y	-1	81352034	696
ENSMUSG00000059610	protein_coding	Olfr222	ENSMUST00000215339	protein_coding	principal1	11	-1	59576169	2166
ENSMUSG00000026450	protein_coding	Chit1	ENSMUST00000086475	protein_coding	principal1	1	1	134138646	1688
ENSMUSG00000059610	protein_coding	Olfr222	ENSMUST00000214351	protein_coding	principal1	11	-1	59576235	2474
ENSMUSG00000059610	protein_coding	Olfr222	ENSMUST00000071943	protein_coding	principal1	11	-1	59571813	1115
ENSMUSG00000020435	protein_coding	Osbp2	ENSMUST00000102950	protein_coding	alternative2	11	-1	3722216	3077
ENSMUSG00000081876	processed_pseudogene	Gm12644	ENSMUST00000119935	processed_pseudogene		4	1	91156682	606
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000162292	protein_coding	principal3	13	-1	95223066	4235
ENSMUSG00000081262	processed_pseudogene	Gm12261	ENSMUST00000117499	processed_pseudogene		11	-1	59578636	645
ENSMUSG00000024155	protein_coding	Meiob	ENSMUST00000234372	protein_coding		17	1	24804289	1665
ENSMUSG00000030789	protein_coding	Itgax	ENSMUST00000033053	protein_coding	principal1	7	1	128129547	4046
ENSMUSG00000063929	protein_coding	Cyp4a32	ENSMUST00000084342	protein_coding	principal1	4	1	115600975	1530
ENSMUSG00000048919	protein_coding	Olfr223	ENSMUST00000215626	protein_coding	principal1	11	-1	59593289	1695
ENSMUSG00000030789	protein_coding	Itgax	ENSMUST00000205460	protein_coding		7	1	128129551	1215
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000162882	processed_transcript		13	-1	95046066	2060
ENSMUSG00000024155	protein_coding	Meiob	ENSMUST00000024972	protein_coding	principal1	17	1	24804311	1774
ENSMUSG00000081270	processed_pseudogene	Gm11653	ENSMUST00000119992	processed_pseudogene		11	1	105875905	1009
ENSMUSG00000048919	protein_coding	Olfr223	ENSMUST00000061293	protein_coding	principal1	11	-1	59590177	1111
ENSMUSG00000024155	protein_coding	Meiob	ENSMUST00000234455	nonsense_mediated_decay		17	1	24804359	1724
ENSMUSG00000030789	protein_coding	Itgax	ENSMUST00000205408	retained_intron		7	1	128134806	352
ENSMUSG00000030789	protein_coding	Itgax	ENSMUST00000206396	retained_intron		7	1	128147494	544
ENSMUSG00000019853	protein_coding	Hebp2	ENSMUST00000020000	protein_coding	principal1	10	-1	18546076	2535
ENSMUSG00000019853	protein_coding	Hebp2	ENSMUST00000213153	protein_coding		10	-1	18545887	968
ENSMUSG00000019853	protein_coding	Hebp2	ENSMUST00000214548	protein_coding		10	-1	18546064	2083
ENSMUSG00000100187	lincRNA	Gm29324	ENSMUST00000188242	lincRNA		Y	1	81395901	1497
ENSMUSG00000100187	lincRNA	Gm29324	ENSMUST00000186348	lincRNA		Y	1	81396352	438
ENSMUSG00000053580	protein_coding	Tanc2	ENSMUST00000168598	protein_coding		11	1	105589986	638
ENSMUSG00000111173	processed_pseudogene	Gm48297	ENSMUST00000215943	processed_pseudogene		10	-1	18565955	469
ENSMUSG00000024277	protein_coding	Mapre2	ENSMUST00000155708	protein_coding		18	1	23752339	925
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000162153	protein_coding	alternative2	13	-1	95250274	2474
ENSMUSG00000024277	protein_coding	Mapre2	ENSMUST00000118826	protein_coding		18	1	23752393	3052
ENSMUSG00000020435	protein_coding	Osbp2	ENSMUST00000070552	protein_coding	principal3	11	-1	3863903	4097
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000172104	protein_coding	alternative2	13	-1	95222813	2493
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000067082	protein_coding	alternative2	13	-1	95222813	2598
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000022192	protein_coding	alternative2	13	-1	95222813	2517
ENSMUSG00000028423	protein_coding	Nfx1	ENSMUST00000098143	protein_coding	principal1	4	1	40970906	4594
ENSMUSG00000099894	protein_coding	Gm20911	ENSMUST00000187135	protein_coding	principal1	Y	1	81458007	924
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000159608	protein_coding		13	-1	95223555	2370
ENSMUSG00000020435	protein_coding	Osbp2	ENSMUST00000101632	protein_coding	alternative2	11	-1	3722216	2697
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000160957	protein_coding		13	-1	95250274	1101
ENSMUSG00000033059	protein_coding	Pygb	ENSMUST00000045441	protein_coding	principal1	2	1	150786735	3909
ENSMUSG00000028423	protein_coding	Nfx1	ENSMUST00000030133	protein_coding		4	1	40970906	4349
ENSMUSG00000020435	protein_coding	Osbp2	ENSMUST00000127371	protein_coding		11	-1	3773789	476
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000160412	retained_intron		13	-1	95053018	456
ENSMUSG00000028423	protein_coding	Nfx1	ENSMUST00000136717	processed_transcript		4	1	41021366	859
ENSMUSG00000033059	protein_coding	Pygb	ENSMUST00000139938	processed_transcript		2	1	150789006	789
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000162328	retained_intron		13	-1	95223066	1338
ENSMUSG00000020435	protein_coding	Osbp2	ENSMUST00000155197	protein_coding		11	-1	3774732	478
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000173891	protein_coding		13	-1	66916631	397
ENSMUSG00000028423	protein_coding	Nfx1	ENSMUST00000143798	processed_transcript		4	1	41002510	1009
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000159598	protein_coding		13	-1	95250315	402
ENSMUSG00000033059	protein_coding	Pygb	ENSMUST00000154366	retained_intron		2	1	150815322	659
ENSMUSG00000020435	protein_coding	Osbp2	ENSMUST00000135250	processed_transcript		11	-1	3863903	3054
ENSMUSG00000021684	protein_coding	Pde8b	ENSMUST00000162716	processed_transcript		13	-1	95186317	539
ENSMUSG00000081490	processed_pseudogene	Gm11830	ENSMUST00000120175	processed_pseudogene		4	1	11144710	561
ENSMUSG00000033059	protein_coding	Pygb	ENSMUST00000129610	retained_intron		2	1	150823607	808
ENSMUSG00000090033	antisense	Gm16243	ENSMUST00000160351	antisense		13	1	95208112	494
ENSMUSG00000033059	protein_coding	Pygb	ENSMUST00000135717	retained_intron		2	1	150828388	531
ENSMUSG00000113070	antisense	Gm48420	ENSMUST00000220923	antisense		13	1	95024301	600
ENSMUSG00000028423	protein_coding	Nfx1	ENSMUST00000124595	processed_transcript		4	1	41009207	1316
ENSMUSG00000028423	protein_coding	Nfx1	ENSMUST00000131305	processed_transcript		4	1	41023204	623
ENSMUSG00000116936	processed_pseudogene	Bod1-ps	ENSMUST00000231811	processed_pseudogene		16	1	17734169	518
ENSMUSG00000028423	protein_coding	Nfx1	ENSMUST00000091614	protein_coding		4	1	40970906	3617
ENSMUSG00000050504	protein_coding	Olfr1323	ENSMUST00000213556	protein_coding	principal1	X	-1	50019359	5431
ENSMUSG00000113377	processed_pseudogene	Gm48446	ENSMUST00000222723	processed_pseudogene		12	-1	18730308	40
ENSMUSG00000050504	protein_coding	Olfr1323	ENSMUST00000213463	protein_coding	principal1	X	-1	50019359	3717
ENSMUSG00000050504	protein_coding	Olfr1323	ENSMUST00000057071	protein_coding	principal1	X	-1	50010235	930
ENSMUSG00000043747	protein_coding	1520401A03Rik	ENSMUST00000062827	retained_intron		17	-1	23722783	3725
ENSMUSG00000104962	TR_J_gene	Trgj1	ENSMUST00000200495	TR_J_gene	principal1	13	1	19210343	60
ENSMUSG00000118656	unitary_pseudogene	BX681418.1	ENSMUST00000239454	unitary_pseudogene		X	1	50164988	87
ENSMUSG00000024277	protein_coding	Mapre2	ENSMUST00000115830	protein_coding		18	1	23753725	2496
ENSMUSG00000117449	processed_pseudogene	Gm6643	ENSMUST00000234566	processed_pseudogene		18	1	28432889	2467
ENSMUSG00000043747	protein_coding	1520401A03Rik	ENSMUST00000177300	retained_intron		17	-1	23706339	461
ENSMUSG00000024277	protein_coding	Mapre2	ENSMUST00000149943	processed_transcript		18	1	23753748	743
ENSMUSG00000113646	unprocessed_pseudogene	Gm46313	ENSMUST00000220463	unprocessed_pseudogene		12	1	18773494	547
ENSMUSG00000043747	protein_coding	1520401A03Rik	ENSMUST00000176095	retained_intron		17	-1	23721940	2109
ENSMUSG00000038570	protein_coding	Saxo2	ENSMUST00000056728	protein_coding	principal2	7	-1	82648523	2783
ENSMUSG00000117348	processed_pseudogene	Gm34658	ENSMUST00000234341	processed_pseudogene		18	-1	28534370	362
ENSMUSG00000043747	protein_coding	1520401A03Rik	ENSMUST00000178006	protein_coding	alternative2	17	-1	23722783	3726
ENSMUSG00000024277	protein_coding	Mapre2	ENSMUST00000025127	protein_coding	principal3	18	1	23803984	4026
ENSMUSG00000038570	protein_coding	Saxo2	ENSMUST00000207693	protein_coding	alternative2	7	-1	82648496	1927
ENSMUSG00000038570	protein_coding	Saxo2	ENSMUST00000156720	protein_coding	alternative2	7	-1	82648523	432
ENSMUSG00000113778	processed_transcript	Gm40847	ENSMUST00000222888	processed_transcript		12	1	18853840	759
ENSMUSG00000024277	protein_coding	Mapre2	ENSMUST00000141853	retained_intron		18	1	23804020	1143
ENSMUSG00000113857	unprocessed_pseudogene	Gm46338	ENSMUST00000222535	unprocessed_pseudogene		12	1	18905926	575
ENSMUSG00000112970	processed_pseudogene	Gm49370	ENSMUST00000220531	processed_pseudogene		12	1	18853871	135
ENSMUSG00000038570	protein_coding	Saxo2	ENSMUST00000151632	retained_intron		7	-1	82648528	2026
ENSMUSG00000050310	protein_coding	Rictor	ENSMUST00000061656	protein_coding	principal1	15	1	6708383	9312
ENSMUSG00000024277	protein_coding	Mapre2	ENSMUST00000165387	nonsense_mediated_decay		18	1	23804103	853
ENSMUSG00000038570	protein_coding	Saxo2	ENSMUST00000126478	protein_coding	alternative2	7	-1	82648528	430
ENSMUSG00000024277	protein_coding	Mapre2	ENSMUST00000170802	protein_coding	alternative1	18	1	23752333	3936
ENSMUSG00000029632	protein_coding	Ndufa4	ENSMUST00000204978	protein_coding	principal1	6	-1	11907483	610
ENSMUSG00000117666	protein_coding	Gm550	ENSMUST00000235513	protein_coding	principal1	19	1	6094419	852
ENSMUSG00000081168	processed_pseudogene	Gm13730	ENSMUST00000121036	processed_pseudogene		2	-1	87201395	1462
ENSMUSG00000029632	protein_coding	Ndufa4	ENSMUST00000204084	protein_coding		6	-1	11907393	409
ENSMUSG00000107638	lincRNA	Gm30524	ENSMUST00000204271	lincRNA		6	1	140955609	2300
ENSMUSG00000117666	protein_coding	Gm550	ENSMUST00000237778	processed_transcript		19	1	6095837	654
ENSMUSG00000029632	protein_coding	Ndufa4	ENSMUST00000203801	retained_intron		6	-1	11907429	1232
ENSMUSG00000107638	lincRNA	Gm30524	ENSMUST00000204355	lincRNA		6	1	140955635	406
ENSMUSG00000117550	processed_pseudogene	Gm20096	ENSMUST00000235115	processed_pseudogene		18	-1	28602989	342
ENSMUSG00000107613	processed_pseudogene	Gm43927	ENSMUST00000204599	processed_pseudogene		6	-1	141008285	117
ENSMUSG00000029632	protein_coding	Ndufa4	ENSMUST00000031637	protein_coding		6	-1	11907450	468
ENSMUSG00000029632	protein_coding	Ndufa4	ENSMUST00000204714	protein_coding	principal1	6	-1	11907497	452
ENSMUSG00000070857	protein_coding	Olfr1113	ENSMUST00000215611	protein_coding	principal1	2	1	87208970	1949
ENSMUSG00000070857	protein_coding	Olfr1113	ENSMUST00000079966	protein_coding	principal1	2	1	87212894	981
ENSMUSG00000117520	lincRNA	Gm50064	ENSMUST00000234056	lincRNA		18	-1	5361861	2483
ENSMUSG00000117617	lincRNA	Gm50065	ENSMUST00000234572	lincRNA		18	-1	5370482	317
ENSMUSG00000076749	TR_C_gene	Trgc1	ENSMUST00000103558	TR_C_gene	principal1	13	1	19214103	924
ENSMUSG00000107462	processed_pseudogene	Gm7384	ENSMUST00000203682	processed_pseudogene		6	1	141138047	530
ENSMUSG00000045679	protein_coding	Pqlc3	ENSMUST00000140933	retained_intron		12	-1	17000032	3045
ENSMUSG00000111248	unprocessed_pseudogene	Olfr1114-ps1	ENSMUST00000213896	unprocessed_pseudogene		2	1	87226043	456
ENSMUSG00000104062	lincRNA	Gm37952	ENSMUST00000192516	lincRNA		Y	-1	23215455	1497
ENSMUSG00000020840	protein_coding	Blmh	ENSMUST00000140781	protein_coding		11	1	76924809	623
ENSMUSG00000104062	lincRNA	Gm37952	ENSMUST00000192169	lincRNA		Y	-1	23215003	434
ENSMUSG00000104062	lincRNA	Gm37952	ENSMUST00000192583	lincRNA		Y	-1	23215003	618
ENSMUSG00000103231	unprocessed_pseudogene	Gm21907	ENSMUST00000192989	unprocessed_pseudogene		Y	1	23240258	696
ENSMUSG00000020218	protein_coding	Wif1	ENSMUST00000020439	protein_coding	principal1	10	1	121033960	2294
ENSMUSG00000064138	protein_coding	Fam172a	ENSMUST00000163257	protein_coding		13	1	77708690	1436
ENSMUSG00000102318	unprocessed_pseudogene	Gm37627	ENSMUST00000194585	unprocessed_pseudogene		Y	1	23277187	615
ENSMUSG00000103074	unprocessed_pseudogene	Gm20925	ENSMUST00000193967	unprocessed_pseudogene		Y	1	23306767	696
ENSMUSG00000020218	protein_coding	Wif1	ENSMUST00000175867	protein_coding		10	1	121034024	2183
ENSMUSG00000019178	protein_coding	Styxl1	ENSMUST00000053906	protein_coding	principal1	5	-1	135778238	1582
ENSMUSG00000102965	unprocessed_pseudogene	Gm20926	ENSMUST00000194457	unprocessed_pseudogene		Y	1	23381504	696
ENSMUSG00000047879	protein_coding	Usp14	ENSMUST00000092096	protein_coding	principal1	18	-1	10030141	4726
ENSMUSG00000020218	protein_coding	Wif1	ENSMUST00000145691	retained_intron		10	1	121083755	1493
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000021991	protein_coding	principal1	13	-1	66933088	1479
ENSMUSG00000019178	protein_coding	Styxl1	ENSMUST00000177559	protein_coding	principal1	5	-1	135778250	1236
ENSMUSG00000019178	protein_coding	Styxl1	ENSMUST00000111163	protein_coding	principal1	5	-1	135778301	1276
ENSMUSG00000047879	protein_coding	Usp14	ENSMUST00000116669	protein_coding		18	-1	10030067	2019
ENSMUSG00000005204	protein_coding	Senp3	ENSMUST00000005336	protein_coding	principal1	11	-1	69681846	2313
ENSMUSG00000019178	protein_coding	Styxl1	ENSMUST00000111164	protein_coding	principal1	5	-1	135778385	1243
ENSMUSG00000064138	protein_coding	Fam172a	ENSMUST00000091459	protein_coding	principal1	13	1	77708690	3892
ENSMUSG00000047879	protein_coding	Usp14	ENSMUST00000133594	retained_intron		18	-1	10000532	477
ENSMUSG00000038204	protein_coding	Asb10	ENSMUST00000048302	protein_coding	principal1	5	-1	24540457	2327
ENSMUSG00000038204	protein_coding	Asb10	ENSMUST00000117900	protein_coding		5	-1	24540978	1432
ENSMUSG00000047879	protein_coding	Usp14	ENSMUST00000154088	retained_intron		18	-1	10008408	989
ENSMUSG00000038204	protein_coding	Asb10	ENSMUST00000119657	protein_coding		5	-1	24540592	1536
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000173158	nonsense_mediated_decay		13	-1	66933067	1415
ENSMUSG00000064138	protein_coding	Fam172a	ENSMUST00000099358	protein_coding		13	1	77708694	2242
ENSMUSG00000019178	protein_coding	Styxl1	ENSMUST00000142343	nonsense_mediated_decay		5	-1	135778291	963
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000223875	retained_intron		13	-1	66916931	671
ENSMUSG00000064138	protein_coding	Fam172a	ENSMUST00000225623	protein_coding		13	1	77708710	775
ENSMUSG00000117478	lincRNA	BC051408	ENSMUST00000234187	lincRNA		18	1	28711861	1761
ENSMUSG00000019178	protein_coding	Styxl1	ENSMUST00000111162	protein_coding		5	-1	135778291	726
ENSMUSG00000045679	protein_coding	Pqlc3	ENSMUST00000054536	protein_coding	principal1	12	-1	17000118	1928
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000174134	processed_transcript		13	-1	66919661	673
ENSMUSG00000005204	protein_coding	Senp3	ENSMUST00000123084	retained_intron		11	-1	69674976	1164
ENSMUSG00000073664	protein_coding	Nbeal1	ENSMUST00000160834	protein_coding	principal1	1	1	60180599	15731
ENSMUSG00000019178	protein_coding	Styxl1	ENSMUST00000178796	protein_coding		5	-1	135778369	680
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000224085	nonsense_mediated_decay		13	-1	66933014	784
ENSMUSG00000076750	TR_V_gene	Trgv3	ENSMUST00000198663	TR_V_gene	principal5	13	1	19242845	353
ENSMUSG00000076750	TR_V_gene	Trgv3	ENSMUST00000103559	TR_V_gene	alternative2	13	1	19242845	350
ENSMUSG00000045679	protein_coding	Pqlc3	ENSMUST00000222203	protein_coding		12	-1	17000067	1706
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000173407	nonsense_mediated_decay		13	-1	66932708	1092
ENSMUSG00000073664	protein_coding	Nbeal1	ENSMUST00000187195	retained_intron		1	1	60180812	5087
ENSMUSG00000116744	lincRNA	Gm49764	ENSMUST00000231428	lincRNA		12	-1	18956598	858
ENSMUSG00000005204	protein_coding	Senp3	ENSMUST00000066760	protein_coding	principal1	11	-1	69682084	2219
ENSMUSG00000073664	protein_coding	Nbeal1	ENSMUST00000160980	protein_coding		1	1	60222202	1130
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000173910	nonsense_mediated_decay		13	-1	66930224	501
ENSMUSG00000073664	protein_coding	Nbeal1	ENSMUST00000185573	retained_intron		1	1	60227222	2677
ENSMUSG00000031851	protein_coding	Ntpcr	ENSMUST00000034313	protein_coding	principal1	8	1	125734203	1155
ENSMUSG00000053580	protein_coding	Tanc2	ENSMUST00000100330	protein_coding	principal1	11	1	105589991	11855
ENSMUSG00000104630	TR_J_gene	Trgj3	ENSMUST00000103562	TR_J_gene	principal1	13	1	19257117	60
ENSMUSG00000064138	protein_coding	Fam172a	ENSMUST00000224217	nonsense_mediated_decay		13	1	77708717	1904
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000174011	retained_intron		13	-1	66933038	2353
ENSMUSG00000031851	protein_coding	Ntpcr	ENSMUST00000065135	protein_coding		8	1	125734238	1497
ENSMUSG00000019178	protein_coding	Styxl1	ENSMUST00000178515	protein_coding		5	-1	135778385	1651
ENSMUSG00000064138	protein_coding	Fam172a	ENSMUST00000224889	processed_transcript		13	1	77708719	643
ENSMUSG00000064138	protein_coding	Fam172a	ENSMUST00000224908	protein_coding		13	1	77708719	645
ENSMUSG00000117473	lincRNA	Gm33948	ENSMUST00000234127	lincRNA		18	1	28862850	2565
ENSMUSG00000053580	protein_coding	Tanc2	ENSMUST00000124367	processed_transcript		11	1	105625038	2331
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000172597	protein_coding		13	-1	66932904	808
ENSMUSG00000019178	protein_coding	Styxl1	ENSMUST00000111161	protein_coding		5	-1	135778291	963
ENSMUSG00000005204	protein_coding	Senp3	ENSMUST00000153516	retained_intron		11	-1	69678119	860
ENSMUSG00000064138	protein_coding	Fam172a	ENSMUST00000224888	retained_intron		13	1	77708729	3876
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000174339	protein_coding		13	-1	66930286	452
ENSMUSG00000111966	processed_pseudogene	Gm5781	ENSMUST00000219792	processed_pseudogene		10	-1	116973208	443
ENSMUSG00000053580	protein_coding	Tanc2	ENSMUST00000207807	protein_coding		11	1	105673422	456
ENSMUSG00000005204	protein_coding	Senp3	ENSMUST00000134942	protein_coding		11	-1	69678687	693
ENSMUSG00000064138	protein_coding	Fam172a	ENSMUST00000224013	retained_intron		13	1	77708784	550
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000173773	protein_coding		13	-1	66933038	386
ENSMUSG00000117473	lincRNA	Gm33948	ENSMUST00000234407	lincRNA		18	1	28872216	628
ENSMUSG00000053580	protein_coding	Tanc2	ENSMUST00000167695	protein_coding		11	1	105713540	668
ENSMUSG00000005204	protein_coding	Senp3	ENSMUST00000142206	retained_intron		11	-1	69674443	387
ENSMUSG00000031851	protein_coding	Ntpcr	ENSMUST00000146055	processed_transcript		8	1	125729963	550
ENSMUSG00000114649	lincRNA	3110006O06Rik	ENSMUST00000225503	lincRNA		13	1	78171630	4086
ENSMUSG00000028211	protein_coding	Trp53inp1	ENSMUST00000029865	protein_coding	principal1	4	1	11156431	5404
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000172807	processed_transcript		13	-1	66933000	754
ENSMUSG00000117473	lincRNA	Gm33948	ENSMUST00000234160	lincRNA		18	1	28872225	712
ENSMUSG00000005204	protein_coding	Senp3	ENSMUST00000135372	processed_transcript		11	-1	69676947	517
ENSMUSG00000053580	protein_coding	Tanc2	ENSMUST00000146162	protein_coding		11	1	105896479	3811
ENSMUSG00000031851	protein_coding	Ntpcr	ENSMUST00000138656	processed_transcript		8	1	125733090	945
ENSMUSG00000021519	protein_coding	Mterf3	ENSMUST00000173062	processed_transcript		13	-1	66933041	222
ENSMUSG00000005204	protein_coding	Senp3	ENSMUST00000130440	retained_intron		11	-1	69678013	161
ENSMUSG00000031851	protein_coding	Ntpcr	ENSMUST00000151172	processed_transcript		8	1	125730032	499
ENSMUSG00000073664	protein_coding	Nbeal1	ENSMUST00000188450	retained_intron		1	1	60235464	4543
ENSMUSG00000113809	processed_pseudogene	Gm48472	ENSMUST00000222049	processed_pseudogene		12	1	18973135	154
ENSMUSG00000053580	protein_coding	Tanc2	ENSMUST00000089485	protein_coding		11	1	105899722	4033
ENSMUSG00000045679	protein_coding	Pqlc3	ENSMUST00000067572	processed_transcript		12	-1	17000025	922
ENSMUSG00000024181	protein_coding	Mrpl28	ENSMUST00000025014	protein_coding	principal1	17	1	26123500	1068
ENSMUSG00000073664	protein_coding	Nbeal1	ENSMUST00000035569	protein_coding		1	1	60260306	3536
ENSMUSG00000108876	lincRNA	Gm44692	ENSMUST00000207441	lincRNA		7	-1	68726467	901
ENSMUSG00000102541	processed_pseudogene	Gm38135	ENSMUST00000195068	processed_pseudogene		1	1	38722620	502
ENSMUSG00000031851	protein_coding	Ntpcr	ENSMUST00000123554	retained_intron		8	1	125734233	379
ENSMUSG00000045679	protein_coding	Pqlc3	ENSMUST00000141232	processed_transcript		12	-1	17000026	361
ENSMUSG00000024181	protein_coding	Mrpl28	ENSMUST00000236166	protein_coding		17	1	26123500	1047
ENSMUSG00000005204	protein_coding	Senp3	ENSMUST00000128355	retained_intron		11	-1	69679195	614
ENSMUSG00000103531	TEC	2610300A13Rik	ENSMUST00000192930	TEC		1	1	38767184	503
ENSMUSG00000031851	protein_coding	Ntpcr	ENSMUST00000152189	protein_coding		8	1	125735835	822
ENSMUSG00000053580	protein_coding	Tanc2	ENSMUST00000147975	processed_transcript		11	1	105901983	3287
ENSMUSG00000045679	protein_coding	Pqlc3	ENSMUST00000156360	nonsense_mediated_decay		12	-1	17000116	2585
ENSMUSG00000024181	protein_coding	Mrpl28	ENSMUST00000236040	retained_intron		17	1	26123520	1134
ENSMUSG00000091682	TR_C_gene	Trgc3	ENSMUST00000198163	TR_C_gene	principal5	13	1	19260885	648
ENSMUSG00000024181	protein_coding	Mrpl28	ENSMUST00000237950	nonsense_mediated_decay		17	1	26123520	1046
ENSMUSG00000083465	processed_pseudogene	Gm11652	ENSMUST00000117842	processed_pseudogene		11	1	105773518	1267
ENSMUSG00000031851	protein_coding	Ntpcr	ENSMUST00000143504	protein_coding		8	1	125730028	520
ENSMUSG00000091682	TR_C_gene	Trgc3	ENSMUST00000164407	protein_coding	alternative2	13	1	19260884	519
ENSMUSG00000047879	protein_coding	Usp14	ENSMUST00000128334	retained_intron		18	-1	10030081	1346
ENSMUSG00000024181	protein_coding	Mrpl28	ENSMUST00000127647	protein_coding		17	1	26123544	1002
ENSMUSG00000028211	protein_coding	Trp53inp1	ENSMUST00000132010	processed_transcript		4	1	11156441	5432
ENSMUSG00000045679	protein_coding	Pqlc3	ENSMUST00000134938	protein_coding		12	-1	17000408	363
ENSMUSG00000047879	protein_coding	Usp14	ENSMUST00000234165	retained_intron		18	-1	10024680	664
ENSMUSG00000024181	protein_coding	Mrpl28	ENSMUST00000123132	retained_intron		17	1	26123723	506
ENSMUSG00000113040	unprocessed_pseudogene	Gm9249	ENSMUST00000221420	unprocessed_pseudogene		12	1	18991483	578
ENSMUSG00000028211	protein_coding	Trp53inp1	ENSMUST00000132693	processed_transcript		4	1	11156444	1674
ENSMUSG00000045679	protein_coding	Pqlc3	ENSMUST00000137960	protein_coding		12	-1	17000408	316
ENSMUSG00000117638	processed_pseudogene	Gm34743	ENSMUST00000234116	processed_pseudogene		18	1	29245347	548
ENSMUSG00000028211	protein_coding	Trp53inp1	ENSMUST00000132346	processed_transcript		4	1	11164459	587
ENSMUSG00000047879	protein_coding	Usp14	ENSMUST00000145929	retained_intron		18	-1	10016925	656
ENSMUSG00000073664	protein_coding	Nbeal1	ENSMUST00000162291	nonsense_mediated_decay		1	1	60260314	5000
ENSMUSG00000047879	protein_coding	Usp14	ENSMUST00000234243	processed_transcript		18	-1	10045105	612
ENSMUSG00000113307	processed_pseudogene	Gm48516	ENSMUST00000221325	processed_pseudogene		12	1	19036258	151
ENSMUSG00000073664	protein_coding	Nbeal1	ENSMUST00000185984	retained_intron		1	1	60266139	3218
ENSMUSG00000047879	protein_coding	Usp14	ENSMUST00000142013	retained_intron		18	-1	10045119	1484
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000115726	protein_coding	principal2	X	1	7607099	6079
ENSMUSG00000073664	protein_coding	Nbeal1	ENSMUST00000159344	protein_coding		1	1	60278770	736
ENSMUSG00000047879	protein_coding	Usp14	ENSMUST00000150321	retained_intron		18	-1	10030022	639
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000087497	protein_coding		17	1	34039437	6048
ENSMUSG00000073664	protein_coding	Nbeal1	ENSMUST00000190958	retained_intron		1	1	60283935	2262
ENSMUSG00000100516	processed_pseudogene	Gm29332	ENSMUST00000190829	processed_pseudogene		1	-1	60267628	227
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000133637	protein_coding		X	1	7607120	2559
ENSMUSG00000020169	protein_coding	Best3	ENSMUST00000020378	protein_coding	principal1	10	1	116986314	2719
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000115725	protein_coding	alternative2	X	1	7607129	6028
ENSMUSG00000076752	TR_C_gene	Trgc2	ENSMUST00000103561	TR_C_gene	principal1	13	-1	19307551	914
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000141634	retained_intron		X	1	7607144	6622
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000123979	retained_intron		X	1	7626230	670
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000128628	protein_coding		X	1	7627194	869
ENSMUSG00000117618	lincRNA	4930578E11Rik	ENSMUST00000234588	lincRNA		18	-1	29496416	2140
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000156047	protein_coding		X	1	7627194	921
ENSMUSG00000117618	lincRNA	4930578E11Rik	ENSMUST00000234290	lincRNA		18	-1	29496569	543
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000157000	retained_intron		X	1	7628189	642
ENSMUSG00000117554	lincRNA	4930527G23Rik	ENSMUST00000234621	lincRNA		18	1	29442200	581
ENSMUSG00000031142	protein_coding	Cacna1f	ENSMUST00000151208	retained_intron		X	1	7631276	820
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000105655	protein_coding		4	-1	152136282	1350
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000105656	protein_coding		4	-1	152136282	1593
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000103196	protein_coding		4	-1	152136282	1323
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000105654	protein_coding		4	-1	152136282	1566
ENSMUSG00000028318	protein_coding	Polr1e	ENSMUST00000133157	protein_coding	principal3	4	1	45018583	2986
ENSMUSG00000041073	protein_coding	Nacad	ENSMUST00000045713	protein_coding	principal1	11	-1	6606053	4892
ENSMUSG00000028318	protein_coding	Polr1e	ENSMUST00000029999	protein_coding	alternative2	4	1	45018662	1724
ENSMUSG00000028318	protein_coding	Polr1e	ENSMUST00000107814	protein_coding	alternative2	4	1	45018663	1470
ENSMUSG00000028318	protein_coding	Polr1e	ENSMUST00000149284	processed_transcript		4	1	45018697	642
ENSMUSG00000028318	protein_coding	Polr1e	ENSMUST00000054723	protein_coding		4	1	45019235	1235
ENSMUSG00000028318	protein_coding	Polr1e	ENSMUST00000150663	processed_transcript		4	1	45029144	429
ENSMUSG00000021518	protein_coding	Ptdss1	ENSMUST00000021990	protein_coding	principal1	13	1	66932830	3424
ENSMUSG00000041073	protein_coding	Nacad	ENSMUST00000177050	nonsense_mediated_decay		11	-1	6599392	521
ENSMUSG00000028318	protein_coding	Polr1e	ENSMUST00000153252	processed_transcript		4	1	45031262	657
ENSMUSG00000041073	protein_coding	Nacad	ENSMUST00000177391	nonsense_mediated_decay		11	-1	6599938	1212
ENSMUSG00000113715	processed_pseudogene	Gm6562	ENSMUST00000221903	processed_pseudogene		13	1	16045641	464
ENSMUSG00000029660	protein_coding	Tex26	ENSMUST00000031667	protein_coding	alternative2	5	1	149439660	1137
ENSMUSG00000112962	processed_pseudogene	Gm31711	ENSMUST00000220687	processed_pseudogene		13	-1	16213764	196
ENSMUSG00000029660	protein_coding	Tex26	ENSMUST00000201454	processed_transcript		5	1	149439682	350
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000131134	protein_coding	principal5	17	1	34039472	5394
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000235819	protein_coding		17	1	34039472	5316
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000114255	protein_coding		17	1	34039472	5253
ENSMUSG00000020840	protein_coding	Blmh	ENSMUST00000021197	protein_coding	principal1	11	1	76945504	2497
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000114252	protein_coding		17	1	34039472	5151
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000237989	protein_coding	alternative1	17	1	34039472	5073
ENSMUSG00000024427	protein_coding	Spry4	ENSMUST00000025295	protein_coding	principal1	18	-1	38601415	4755
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000237490	protein_coding		17	1	34039655	5148
ENSMUSG00000021518	protein_coding	Ptdss1	ENSMUST00000224244	nonsense_mediated_decay		13	1	66933216	2806
ENSMUSG00000042659	protein_coding	Arrdc4	ENSMUST00000048068	protein_coding	principal3	7	-1	68749241	3905
ENSMUSG00000021518	protein_coding	Ptdss1	ENSMUST00000224290	nonsense_mediated_decay		13	1	66933448	498
ENSMUSG00000020840	protein_coding	Blmh	ENSMUST00000155867	retained_intron		11	1	76945729	682
ENSMUSG00000054999	protein_coding	Naaladl1	ENSMUST00000044451	protein_coding	principal1	19	1	6105782	2491
ENSMUSG00000021518	protein_coding	Ptdss1	ENSMUST00000225347	nonsense_mediated_decay		13	1	66945323	637
ENSMUSG00000028228	protein_coding	Cpne3	ENSMUST00000029885	protein_coding	principal1	4	-1	19570108	5648
ENSMUSG00000021518	protein_coding	Ptdss1	ENSMUST00000225024	processed_transcript		13	1	66976767	295
ENSMUSG00000029029	protein_coding	Wrap73	ENSMUST00000030895	protein_coding	principal1	4	1	154142372	1598
ENSMUSG00000114188	lincRNA	Gm40849	ENSMUST00000222330	lincRNA		12	1	19044706	603
ENSMUSG00000021518	protein_coding	Ptdss1	ENSMUST00000224175	retained_intron		13	1	66993468	862
ENSMUSG00000028228	protein_coding	Cpne3	ENSMUST00000134025	processed_transcript		4	-1	19543678	644
ENSMUSG00000020840	protein_coding	Blmh	ENSMUST00000140193	retained_intron		11	1	76945739	3047
ENSMUSG00000098386	processed_pseudogene	Ranbp2-ps10	ENSMUST00000185097	processed_pseudogene		7	-1	15566869	385
ENSMUSG00000042659	protein_coding	Arrdc4	ENSMUST00000118110	protein_coding	alternative2	7	-1	68749188	1129
ENSMUSG00000093397	unprocessed_pseudogene	Obox4-ps29	ENSMUST00000175956	unprocessed_pseudogene		7	1	15454323	1134
ENSMUSG00000098278	unprocessed_pseudogene	Ranbp2-ps8	ENSMUST00000183723	unprocessed_pseudogene		7	-1	15408864	345
ENSMUSG00000105830	TR_J_gene	Trgj2	ENSMUST00000197113	TR_J_gene	principal1	13	-1	19311304	60
ENSMUSG00000020840	protein_coding	Blmh	ENSMUST00000125145	protein_coding		11	1	76945821	700
ENSMUSG00000098861	processed_pseudogene	Ranbp2-ps9	ENSMUST00000184566	processed_pseudogene		7	-1	15528427	382
ENSMUSG00000029660	protein_coding	Tex26	ENSMUST00000201683	protein_coding	principal3	5	1	149439703	1456
ENSMUSG00000093913	unprocessed_pseudogene	Obox4-ps28	ENSMUST00000175654	unprocessed_pseudogene		7	1	15442998	1362
ENSMUSG00000028228	protein_coding	Cpne3	ENSMUST00000108254	retained_intron		4	-1	19570083	1563
ENSMUSG00000117626	processed_pseudogene	Gm7917	ENSMUST00000234976	processed_pseudogene		18	-1	29657596	543
ENSMUSG00000112723	processed_pseudogene	Gm9110	ENSMUST00000219035	processed_pseudogene		12	-1	5067448	617
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000070018	protein_coding		4	-1	152136325	1618
ENSMUSG00000117465	lincRNA	Gm49980	ENSMUST00000234467	lincRNA		18	1	30267249	1183
ENSMUSG00000029029	protein_coding	Wrap73	ENSMUST00000142665	processed_transcript		4	1	154142409	3959
ENSMUSG00000020840	protein_coding	Blmh	ENSMUST00000168124	nonsense_mediated_decay		11	1	76945851	1490
ENSMUSG00000015697	protein_coding	Setdb1	ENSMUST00000107171	protein_coding	alternative2	3	-1	95357156	4573
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000023599	protein_coding	principal1	16	1	23107444	2208
ENSMUSG00000020840	protein_coding	Blmh	ENSMUST00000155053	protein_coding		11	1	76946047	687
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000105657	protein_coding		4	-1	152136325	1375
ENSMUSG00000029029	protein_coding	Wrap73	ENSMUST00000146734	protein_coding		4	1	154151692	399
ENSMUSG00000029016	protein_coding	Clcn6	ENSMUST00000137724	protein_coding	alternative1	4	-1	148038821	5198
ENSMUSG00000113992	unprocessed_pseudogene	Gm9158	ENSMUST00000222116	unprocessed_pseudogene		12	1	19096320	582
ENSMUSG00000099790	lincRNA	Gm28457	ENSMUST00000191277	lincRNA		Y	1	45225740	1498
ENSMUSG00000020840	protein_coding	Blmh	ENSMUST00000146197	protein_coding		11	1	76946068	653
ENSMUSG00000029660	protein_coding	Tex26	ENSMUST00000202920	protein_coding	alternative2	5	1	149439706	1009
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000080042	protein_coding		4	-1	152136325	1402
ENSMUSG00000029029	protein_coding	Wrap73	ENSMUST00000132562	processed_transcript		4	1	154155215	657
ENSMUSG00000020840	protein_coding	Blmh	ENSMUST00000145732	processed_transcript		11	1	76961296	882
ENSMUSG00000099790	lincRNA	Gm28457	ENSMUST00000190411	lincRNA		Y	1	45226193	437
ENSMUSG00000029016	protein_coding	Clcn6	ENSMUST00000105711	nonsense_mediated_decay		4	-1	148038770	2783
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000084114	protein_coding		4	-1	152136325	1645
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000126153	protein_coding	principal1	18	-1	77047308	1942
ENSMUSG00000101594	unprocessed_pseudogene	Gm21779	ENSMUST00000189508	unprocessed_pseudogene		Y	-1	45386331	696
ENSMUSG00000029016	protein_coding	Clcn6	ENSMUST00000134377	processed_transcript		4	-1	148038763	660
ENSMUSG00000104580	antisense	Gm42620	ENSMUST00000197715	antisense		5	-1	103533021	630
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000136627	processed_transcript		4	-1	152131841	882
ENSMUSG00000029016	protein_coding	Clcn6	ENSMUST00000131232	nonsense_mediated_decay		4	-1	148038562	627
ENSMUSG00000100011	lincRNA	Gm28458	ENSMUST00000190542	lincRNA		Y	1	45448960	1497
ENSMUSG00000021520	protein_coding	Uqcrb	ENSMUST00000021993	protein_coding	principal1	13	-1	66905378	535
ENSMUSG00000029660	protein_coding	Tex26	ENSMUST00000200985	nonsense_mediated_decay		5	1	149439706	1137
ENSMUSG00000076754	TR_V_gene	Trgv2	ENSMUST00000103563	TR_V_gene	principal1	13	-1	19337167	491
ENSMUSG00000100011	lincRNA	Gm28458	ENSMUST00000189883	lincRNA		Y	1	45449413	437
ENSMUSG00000015697	protein_coding	Setdb1	ENSMUST00000015841	protein_coding	principal3	3	-1	95357200	4658
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000135029	nonsense_mediated_decay		18	-1	77047243	2003
ENSMUSG00000114156	processed_pseudogene	Gm48523	ENSMUST00000222735	processed_pseudogene		12	1	19166959	154
ENSMUSG00000021520	protein_coding	Uqcrb	ENSMUST00000174606	retained_intron		13	-1	66902786	565
ENSMUSG00000113205	processed_pseudogene	Gm48525	ENSMUST00000222931	processed_pseudogene		12	1	19176103	127
ENSMUSG00000015697	protein_coding	Setdb1	ENSMUST00000107170	protein_coding	principal3	3	-1	95357202	4622
ENSMUSG00000029016	protein_coding	Clcn6	ENSMUST00000030879	protein_coding	principal2	4	-1	148038813	3306
ENSMUSG00000015697	protein_coding	Setdb1	ENSMUST00000132468	retained_intron		3	-1	95357156	2440
ENSMUSG00000015697	protein_coding	Setdb1	ENSMUST00000152260	retained_intron		3	-1	95357089	645
ENSMUSG00000083473	processed_pseudogene	Gm13207	ENSMUST00000119862	processed_pseudogene		4	1	148031554	773
ENSMUSG00000029030	protein_coding	Tprgl	ENSMUST00000030896	protein_coding	principal1	4	-1	154160666	1724
ENSMUSG00000076755	TR_V_gene	Trgv1	ENSMUST00000103564	TR_V_gene	principal1	13	1	19339989	374
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000156517	processed_transcript		4	-1	152131866	1734
ENSMUSG00000105860	processed_pseudogene	Gm42578	ENSMUST00000199960	processed_pseudogene		3	1	95352784	194
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000143354	processed_transcript		17	1	34048280	2723
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000135185	protein_coding		4	-1	152149052	2102
ENSMUSG00000083651	processed_pseudogene	Gm11524	ENSMUST00000119349	processed_pseudogene		11	1	96870195	807
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000134503	protein_coding	principal1	10	1	75568656	2140
ENSMUSG00000029660	protein_coding	Tex26	ENSMUST00000202677	nonsense_mediated_decay		5	1	149439715	1191
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000236837	retained_intron		17	1	34050915	349
ENSMUSG00000113110	processed_pseudogene	Gm48528	ENSMUST00000221548	processed_pseudogene		12	1	19218082	494
ENSMUSG00000074826	protein_coding	Gm10767	ENSMUST00000168767	protein_coding	principal1	13	1	66904914	2067
ENSMUSG00000029030	protein_coding	Tprgl	ENSMUST00000134492	processed_transcript		4	-1	154160666	915
ENSMUSG00000029660	protein_coding	Tex26	ENSMUST00000201610	nonsense_mediated_decay		5	1	149439719	1001
ENSMUSG00000029030	protein_coding	Tprgl	ENSMUST00000105639	protein_coding		4	-1	154160632	642
ENSMUSG00000087117	processed_transcript	Gm11523	ENSMUST00000143569	lincRNA		11	-1	96873948	785
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000173749	processed_transcript		17	1	34052307	426
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000207676	protein_coding	alternative2	4	-1	152152222	4618
ENSMUSG00000107164	sense_intronic	4933425D22Rik	ENSMUST00000201035	sense_intronic		5	1	149441861	1721
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000137374	retained_intron		17	1	34055081	351
ENSMUSG00000029030	protein_coding	Tprgl	ENSMUST00000136374	processed_transcript		4	-1	154160166	373
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000137937	retained_intron		4	-1	152131857	1190
ENSMUSG00000074826	protein_coding	Gm10767	ENSMUST00000099412	protein_coding	principal1	13	1	66905415	1652
ENSMUSG00000087117	processed_transcript	Gm11523	ENSMUST00000184482	lincRNA		11	-1	96873954	802
ENSMUSG00000028943	protein_coding	Espn	ENSMUST00000148075	retained_intron		4	-1	152131230	784
ENSMUSG00000029030	protein_coding	Tprgl	ENSMUST00000133165	processed_transcript		4	-1	154160606	947
ENSMUSG00000087117	processed_transcript	Gm11523	ENSMUST00000183967	antisense		11	-1	96873934	508
ENSMUSG00000105389	TEC	BB187690	ENSMUST00000198619	TEC		3	-1	57655579	1176
ENSMUSG00000024330	protein_coding	Col11a2	ENSMUST00000144927	retained_intron		17	1	34062421	836
ENSMUSG00000034573	protein_coding	Ptpn13	ENSMUST00000199412	retained_intron		5	1	103425192	3439
ENSMUSG00000024790	protein_coding	Sac3d1	ENSMUST00000113533	protein_coding	principal1	19	-1	6118650	1442
ENSMUSG00000112780	lincRNA	Gm48410	ENSMUST00000217935	lincRNA		10	-1	121115245	1260
ENSMUSG00000114362	antisense	4933433G19Rik	ENSMUST00000224483	antisense		13	-1	67032408	1063
ENSMUSG00000114362	antisense	4933433G19Rik	ENSMUST00000224762	antisense		13	-1	67007593	1535
ENSMUSG00000100538	lincRNA	Gm28340	ENSMUST00000189218	lincRNA		1	1	19242725	202
ENSMUSG00000101117	processed_pseudogene	Gm28341	ENSMUST00000190883	processed_pseudogene		1	-1	19320697	472
ENSMUSG00000034573	protein_coding	Ptpn13	ENSMUST00000196014	nonsense_mediated_decay		5	1	103425240	2608
ENSMUSG00000034573	protein_coding	Ptpn13	ENSMUST00000196800	retained_intron		5	1	103425256	3408
ENSMUSG00000003299	protein_coding	Mrpl4	ENSMUST00000003386	protein_coding	principal1	9	1	21002738	1288
ENSMUSG00000020178	protein_coding	Adora2a	ENSMUST00000105420	protein_coding	principal1	10	1	75316877	2596
ENSMUSG00000108729	processed_pseudogene	Gm17831	ENSMUST00000205579	processed_pseudogene		7	1	128154019	900
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000122984	nonsense_mediated_decay		18	-1	77047286	2039
ENSMUSG00000003299	protein_coding	Mrpl4	ENSMUST00000216824	nonsense_mediated_decay		9	1	21002915	715
ENSMUSG00000020178	protein_coding	Adora2a	ENSMUST00000219044	protein_coding		10	1	75317102	538
ENSMUSG00000020178	protein_coding	Adora2a	ENSMUST00000219322	protein_coding		10	1	75323120	601
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000137498	protein_coding		18	-1	77047270	1824
ENSMUSG00000041488	protein_coding	Stx3	ENSMUST00000075304	protein_coding		19	-1	11818811	2430
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000137354	protein_coding		18	-1	77047243	1482
ENSMUSG00000003299	protein_coding	Mrpl4	ENSMUST00000216175	nonsense_mediated_decay		9	1	21002918	846
ENSMUSG00000020178	protein_coding	Adora2a	ENSMUST00000217703	protein_coding		10	1	75324858	434
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000154053	processed_transcript		18	-1	77006872	792
ENSMUSG00000100204	processed_pseudogene	Gm4849	ENSMUST00000188428	processed_pseudogene		1	1	19330939	2246
ENSMUSG00000003299	protein_coding	Mrpl4	ENSMUST00000214124	protein_coding		9	1	21002918	815
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000103175	protein_coding	principal1	4	1	155943831	1309
ENSMUSG00000102597	TEC	Gm38382	ENSMUST00000193790	TEC		1	1	19614269	2499
ENSMUSG00000003299	protein_coding	Mrpl4	ENSMUST00000216818	protein_coding		9	1	21002942	657
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000026486	protein_coding		18	-1	77047296	1674
ENSMUSG00000015869	protein_coding	Prpsap1	ENSMUST00000152874	processed_transcript		11	-1	116490314	1691
ENSMUSG00000067274	protein_coding	Rplp0	ENSMUST00000086519	protein_coding	principal1	5	1	115559467	1358
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000125744	processed_transcript		18	-1	77012031	768
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000138336	retained_intron		18	-1	77008202	668
ENSMUSG00000067274	protein_coding	Rplp0	ENSMUST00000156359	protein_coding		5	1	115559537	854
ENSMUSG00000041488	protein_coding	Stx3	ENSMUST00000047698	nonsense_mediated_decay		19	-1	11819403	3068
ENSMUSG00000003299	protein_coding	Mrpl4	ENSMUST00000213977	retained_intron		9	1	21002956	2317
ENSMUSG00000067274	protein_coding	Rplp0	ENSMUST00000152976	protein_coding		5	1	115559578	694
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000154665	protein_coding		18	-1	77047287	1515
ENSMUSG00000003299	protein_coding	Mrpl4	ENSMUST00000216325	processed_transcript		9	1	21002975	625
ENSMUSG00000067274	protein_coding	Rplp0	ENSMUST00000155584	retained_intron		5	1	115559623	600
ENSMUSG00000003299	protein_coding	Mrpl4	ENSMUST00000216466	nonsense_mediated_decay		9	1	21003384	305
ENSMUSG00000025420	protein_coding	Katnal2	ENSMUST00000123650	protein_coding		18	-1	77047298	638
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000006508	protein_coding	principal1	10	1	75573448	2167
ENSMUSG00000073838	protein_coding	Tufm	ENSMUST00000098048	protein_coding	principal1	7	1	126487361	1679
ENSMUSG00000041488	protein_coding	Stx3	ENSMUST00000211641	protein_coding		19	-1	11818893	1018
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000139968	processed_transcript		2	-1	30803635	1033
ENSMUSG00000047654	protein_coding	Tssk6	ENSMUST00000050373	protein_coding	principal1	8	1	69902184	1335
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000147117	nonsense_mediated_decay		16	1	23107754	1947
ENSMUSG00000038199	protein_coding	Iqca1l	ENSMUST00000200634	nonsense_mediated_decay		5	-1	24555410	3103
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000134816	retained_intron		16	1	23107758	776
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000152657	protein_coding		10	1	75564155	666
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000145079	protein_coding		10	1	75561604	676
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000140219	protein_coding		10	1	75561655	758
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000143792	protein_coding		10	1	75566298	909
ENSMUSG00000052293	protein_coding	Taf9	ENSMUST00000190165	protein_coding		13	1	100651579	794
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000125770	protein_coding		10	1	75568657	724
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000141392	retained_intron		16	1	23107759	486
ENSMUSG00000048967	protein_coding	Yjefn3	ENSMUST00000152938	protein_coding	principal1	8	-1	69893975	785
ENSMUSG00000052293	protein_coding	Taf9	ENSMUST00000185767	protein_coding		13	1	100651584	778
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000050003	protein_coding	principal1	2	-1	30801707	1672
ENSMUSG00000073838	protein_coding	Tufm	ENSMUST00000106392	protein_coding		7	1	126487378	1754
ENSMUSG00000048967	protein_coding	Yjefn3	ENSMUST00000152456	processed_transcript		8	-1	69888185	300
ENSMUSG00000052293	protein_coding	Taf9	ENSMUST00000187792	protein_coding		13	1	100651625	824
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000145928	protein_coding		10	1	75568634	907
ENSMUSG00000041488	protein_coding	Stx3	ENSMUST00000069285	protein_coding	principal1	19	-1	11818942	2810
ENSMUSG00000048967	protein_coding	Yjefn3	ENSMUST00000180068	protein_coding		8	-1	69902712	629
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000130396	processed_transcript		2	-1	30796664	741
ENSMUSG00000052293	protein_coding	Taf9	ENSMUST00000190594	protein_coding	principal1	13	1	100651626	1962
ENSMUSG00000041488	protein_coding	Stx3	ENSMUST00000211089	processed_transcript		19	-1	11782904	189
ENSMUSG00000041488	protein_coding	Stx3	ENSMUST00000211047	protein_coding		19	-1	11818721	870
ENSMUSG00000107023	protein_coding	Gm42715	ENSMUST00000189629	nonsense_mediated_decay	principal5	7	1	127519584	12746
ENSMUSG00000060924	protein_coding	Csmd1	ENSMUST00000082104	protein_coding	principal1	8	-1	17535281	14182
ENSMUSG00000073838	protein_coding	Tufm	ENSMUST00000205346	processed_transcript		7	1	126487629	369
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000151212	protein_coding		10	1	75568674	531
ENSMUSG00000052293	protein_coding	Taf9	ENSMUST00000167256	protein_coding	principal1	13	1	100651607	1230
ENSMUSG00000073838	protein_coding	Tufm	ENSMUST00000205478	retained_intron		7	1	126488614	320
ENSMUSG00000041488	protein_coding	Stx3	ENSMUST00000210481	retained_intron		19	-1	11789617	760
ENSMUSG00000020180	protein_coding	Snrpd3	ENSMUST00000020397	protein_coding	principal1	10	1	75517551	3036
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000131565	protein_coding		10	1	75568641	647
ENSMUSG00000107023	protein_coding	Gm42715	ENSMUST00000206825	nonsense_mediated_decay	alternative2	7	1	127560085	925
ENSMUSG00000041488	protein_coding	Stx3	ENSMUST00000209304	retained_intron		19	-1	11818850	659
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000024056	protein_coding		4	1	155943850	3483
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000128886	protein_coding		10	1	75568662	630
ENSMUSG00000073838	protein_coding	Tufm	ENSMUST00000206055	protein_coding		7	1	126488686	356
ENSMUSG00000080850	processed_pseudogene	Gm12439	ENSMUST00000117162	processed_pseudogene		4	1	48675156	365
ENSMUSG00000083091	processed_pseudogene	Gm12438	ENSMUST00000122034	processed_pseudogene		4	-1	48745850	336
ENSMUSG00000073838	protein_coding	Tufm	ENSMUST00000206572	protein_coding		7	1	126489371	660
ENSMUSG00000020180	protein_coding	Snrpd3	ENSMUST00000191097	retained_intron		10	1	75518014	665
ENSMUSG00000101225	antisense	1700008J07Rik	ENSMUST00000185351	antisense		7	-1	127512869	2432
ENSMUSG00000034573	protein_coding	Ptpn13	ENSMUST00000048957	protein_coding	principal1	5	1	103425501	7915
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000136492	protein_coding		4	1	155943861	395
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000136883	processed_transcript		2	-1	30803661	954
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000143226	protein_coding		10	1	75571526	834
ENSMUSG00000025375	protein_coding	Aatk	ENSMUST00000064307	protein_coding	alternative2	11	-1	120047070	5336
ENSMUSG00000020180	protein_coding	Snrpd3	ENSMUST00000220229	protein_coding		10	1	75518043	442
ENSMUSG00000074369	protein_coding	Obox2	ENSMUST00000036575	protein_coding	principal1	7	1	15388721	1459
ENSMUSG00000060924	protein_coding	Csmd1	ENSMUST00000125551	retained_intron		8	-1	15984812	6476
ENSMUSG00000034573	protein_coding	Ptpn13	ENSMUST00000200581	retained_intron		5	1	103529566	2814
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000124259	protein_coding		10	1	75571531	962
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000139459	protein_coding		10	1	75573886	792
ENSMUSG00000074369	protein_coding	Obox2	ENSMUST00000174076	protein_coding	principal1	7	1	15388968	782
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000148447	processed_transcript		10	1	75571570	551
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000129020	protein_coding		10	1	75576076	787
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000131937	processed_transcript		2	-1	30803644	789
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000150846	processed_transcript		4	1	155943864	582
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000138959	processed_transcript		2	-1	30801001	796
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000156487	retained_intron		10	1	75585105	820
ENSMUSG00000036199	protein_coding	Ndufa13	ENSMUST00000110167	protein_coding	principal1	8	-1	69902558	1251
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000155186	protein_coding		10	1	75581370	700
ENSMUSG00000002996	protein_coding	Hbp1	ENSMUST00000172314	protein_coding	principal1	12	-1	31950535	3142
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000105583	protein_coding		4	1	155943869	1434
ENSMUSG00000034285	protein_coding	Nipsnap1	ENSMUST00000038570	protein_coding	principal1	11	1	4873951	1926
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000129232	protein_coding		10	1	75566293	767
ENSMUSG00000074369	protein_coding	Obox2	ENSMUST00000174305	protein_coding	principal1	7	1	15388993	834
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000152536	protein_coding		4	1	155943910	601
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000129484	processed_transcript		2	-1	30803657	969
ENSMUSG00000074369	protein_coding	Obox2	ENSMUST00000172478	protein_coding	principal1	7	1	15390176	818
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000118192	protein_coding		4	1	155943992	922
ENSMUSG00000006345	protein_coding	Ggt1	ENSMUST00000141062	protein_coding		10	1	75564148	429
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000131315	processed_transcript		2	-1	30803643	911
ENSMUSG00000114191	processed_pseudogene	Gm18631	ENSMUST00000223125	processed_pseudogene		12	1	88220556	1043
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000138218	retained_intron		4	1	155944000	492
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000150205	processed_transcript		2	-1	30803644	755
ENSMUSG00000038199	protein_coding	Iqca1l	ENSMUST00000088302	protein_coding	principal1	5	-1	24555410	2613
ENSMUSG00000113793	processed_pseudogene	Gm48553	ENSMUST00000220822	processed_pseudogene		12	-1	88225944	408
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000126898	processed_transcript		2	-1	30796875	526
ENSMUSG00000113564	processed_pseudogene	Gm48560	ENSMUST00000221854	processed_pseudogene		12	-1	88248705	162
ENSMUSG00000002996	protein_coding	Hbp1	ENSMUST00000167458	protein_coding		12	-1	31950223	2733
ENSMUSG00000095799	protein_coding	Gm8332	ENSMUST00000179468	protein_coding	principal1	12	-1	88250100	435
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000135556	processed_transcript		2	-1	30803644	779
ENSMUSG00000038199	protein_coding	Iqca1l	ENSMUST00000199185	retained_intron		5	-1	24552633	2377
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000133380	processed_transcript		2	-1	30803644	774
ENSMUSG00000026095	protein_coding	Asnsd1	ENSMUST00000027264	protein_coding	principal1	1	-1	53352752	2442
ENSMUSG00000038199	protein_coding	Iqca1l	ENSMUST00000198887	protein_coding		5	-1	24555469	550
ENSMUSG00000113801	processed_pseudogene	Gm18618	ENSMUST00000222211	processed_pseudogene		12	-1	88259385	473
ENSMUSG00000044320	protein_coding	1700001O22Rik	ENSMUST00000140168	processed_transcript		2	-1	30803623	726
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000105582	protein_coding		4	1	155944158	1394
ENSMUSG00000002996	protein_coding	Hbp1	ENSMUST00000176643	protein_coding		12	-1	31940407	767
ENSMUSG00000064246	protein_coding	Chil1	ENSMUST00000156873	protein_coding	alternative2	1	1	134182176	1645
ENSMUSG00000030469	protein_coding	Zfp719	ENSMUST00000058104	protein_coding	principal1	7	1	43579610	4494
ENSMUSG00000114145	processed_pseudogene	Gm48561	ENSMUST00000223405	processed_pseudogene		12	-1	88270614	250
ENSMUSG00000038199	protein_coding	Iqca1l	ENSMUST00000198709	processed_transcript		5	-1	24556809	655
ENSMUSG00000025375	protein_coding	Aatk	ENSMUST00000150730	processed_transcript		11	-1	120047167	6455
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000130775	retained_intron		16	1	23107759	386
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000151892	retained_intron		4	1	155955056	453
ENSMUSG00000113570	TEC	Gm5953	ENSMUST00000220644	TEC		12	1	19288562	2616
ENSMUSG00000002996	protein_coding	Hbp1	ENSMUST00000176138	retained_intron		12	-1	31934803	746
ENSMUSG00000026095	protein_coding	Asnsd1	ENSMUST00000123519	protein_coding		1	-1	53352752	983
ENSMUSG00000030469	protein_coding	Zfp719	ENSMUST00000205769	protein_coding		7	1	43579619	596
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000124092	processed_transcript		4	1	155956005	847
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000105581	protein_coding	principal1	4	1	155944158	1391
ENSMUSG00000002996	protein_coding	Hbp1	ENSMUST00000175686	protein_coding		12	-1	31949608	1315
ENSMUSG00000030469	protein_coding	Zfp719	ENSMUST00000147075	retained_intron		7	1	43579639	569
ENSMUSG00000026095	protein_coding	Asnsd1	ENSMUST00000147021	nonsense_mediated_decay		1	-1	53352752	1262
ENSMUSG00000023286	protein_coding	Ube2j2	ENSMUST00000166489	protein_coding	principal1	4	1	155943831	3339
ENSMUSG00000034285	protein_coding	Nipsnap1	ENSMUST00000136552	nonsense_mediated_decay		11	1	4873999	1566
ENSMUSG00000098799	TR_J_gene	Trgj4	ENSMUST00000184430	TR_J_gene	principal1	13	1	19342152	61
ENSMUSG00000079029	protein_coding	Gm5662	ENSMUST00000101168	protein_coding	principal1	12	-1	88274500	1840
ENSMUSG00000064246	protein_coding	Chil1	ENSMUST00000153856	protein_coding	alternative2	1	1	134182404	1839
ENSMUSG00000002996	protein_coding	Hbp1	ENSMUST00000176520	protein_coding		12	-1	31950170	920
ENSMUSG00000060924	protein_coding	Csmd1	ENSMUST00000131778	processed_transcript		8	-1	17535281	5776
ENSMUSG00000026095	protein_coding	Asnsd1	ENSMUST00000154402	protein_coding		1	-1	53351275	793
ENSMUSG00000034285	protein_coding	Nipsnap1	ENSMUST00000139737	protein_coding		11	1	4883194	435
ENSMUSG00000060924	protein_coding	Csmd1	ENSMUST00000138348	retained_intron		8	-1	17535281	2377
ENSMUSG00000030884	protein_coding	Uqcrc2	ENSMUST00000033176	protein_coding	principal1	7	1	120635176	1896
ENSMUSG00000054099	protein_coding	Slc25a40	ENSMUST00000066921	protein_coding	principal1	5	1	8422850	2784
ENSMUSG00000026095	protein_coding	Asnsd1	ENSMUST00000136468	retained_intron		1	-1	53352570	658
ENSMUSG00000002996	protein_coding	Hbp1	ENSMUST00000176103	protein_coding		12	-1	31950221	1319
ENSMUSG00000026427	protein_coding	Eif2d	ENSMUST00000112446	protein_coding	principal3	1	1	131153181	2153
ENSMUSG00000034285	protein_coding	Nipsnap1	ENSMUST00000149603	processed_transcript		11	1	4883206	572
ENSMUSG00000060924	protein_coding	Csmd1	ENSMUST00000137947	processed_transcript		8	-1	17535586	2911
ENSMUSG00000034285	protein_coding	Nipsnap1	ENSMUST00000141269	processed_transcript		11	1	4883264	373
ENSMUSG00000060924	protein_coding	Csmd1	ENSMUST00000133933	retained_intron		8	-1	17535385	2564
ENSMUSG00000002996	protein_coding	Hbp1	ENSMUST00000176084	protein_coding		12	-1	31950210	813
ENSMUSG00000034285	protein_coding	Nipsnap1	ENSMUST00000135405	processed_transcript		11	1	4874005	656
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000232287	protein_coding		16	1	23107759	1001
ENSMUSG00000076757	TR_C_gene	Trgc4	ENSMUST00000179181	TR_C_gene	principal1	13	1	19344558	985
ENSMUSG00000054099	protein_coding	Slc25a40	ENSMUST00000199817	retained_intron		5	1	8422858	1481
ENSMUSG00000060924	protein_coding	Csmd1	ENSMUST00000122983	processed_transcript		8	-1	17535377	1317
ENSMUSG00000048814	protein_coding	Lonrf2	ENSMUST00000147695	protein_coding	principal1	1	-1	38836711	6932
ENSMUSG00000100974	unprocessed_pseudogene	Gm28459	ENSMUST00000191319	unprocessed_pseudogene		Y	-1	45753993	696
ENSMUSG00000064246	protein_coding	Chil1	ENSMUST00000133701	protein_coding		1	1	134182474	828
ENSMUSG00000087363	antisense	Gm16347	ENSMUST00000149000	antisense		8	1	16433175	772
ENSMUSG00000073184	lincRNA	Gm49957	ENSMUST00000101568	lincRNA		12	1	19292813	241
ENSMUSG00000048814	protein_coding	Lonrf2	ENSMUST00000191724	retained_intron		1	-1	38836374	1178
ENSMUSG00000002996	protein_coding	Hbp1	ENSMUST00000175666	retained_intron		12	-1	31950234	979
ENSMUSG00000064246	protein_coding	Chil1	ENSMUST00000132873	protein_coding		1	1	134182481	585
ENSMUSG00000113408	processed_pseudogene	Gm48540	ENSMUST00000222201	processed_pseudogene		12	-1	19295877	109
ENSMUSG00000101675	lincRNA	Gm28461	ENSMUST00000190023	lincRNA		Y	1	45788731	484
ENSMUSG00000087363	antisense	Gm16347	ENSMUST00000131707	antisense		8	1	16433186	622
ENSMUSG00000026097	protein_coding	Ormdl1	ENSMUST00000135746	retained_intron		1	1	53297095	3076
ENSMUSG00000026427	protein_coding	Eif2d	ENSMUST00000068805	protein_coding	alternative2	1	1	131153181	2009
ENSMUSG00000109616	TEC	Gm45393	ENSMUST00000211634	TEC		8	1	16547242	2631
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000077605	protein_coding		16	1	23107759	2708
ENSMUSG00000048814	protein_coding	Lonrf2	ENSMUST00000039612	protein_coding		1	-1	38821215	5077
ENSMUSG00000101675	lincRNA	Gm28461	ENSMUST00000191406	lincRNA		Y	1	45788731	174
ENSMUSG00000064246	protein_coding	Chil1	ENSMUST00000139254	retained_intron		1	1	134182482	848
ENSMUSG00000054099	protein_coding	Slc25a40	ENSMUST00000196727	nonsense_mediated_decay		5	1	8422858	2749
ENSMUSG00000096737	protein_coding	Vmn1r117	ENSMUST00000166937	protein_coding	principal1	7	-1	20884121	924
ENSMUSG00000085150	antisense	Gm16346	ENSMUST00000129158	antisense		8	1	16226003	937
ENSMUSG00000064246	protein_coding	Chil1	ENSMUST00000144819	retained_intron		1	1	134183801	647
ENSMUSG00000109625	TEC	3110080E11Rik	ENSMUST00000210736	TEC		8	-1	16916182	3477
ENSMUSG00000110132	TEC	Gm45394	ENSMUST00000209240	TEC		8	1	16751319	1175
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000140017	retained_intron		16	1	23107767	770
ENSMUSG00000018167	protein_coding	Stard3	ENSMUST00000018311	protein_coding	principal1	11	1	98358368	2070
ENSMUSG00000064246	protein_coding	Chil1	ENSMUST00000134812	retained_intron		1	1	134189126	735
ENSMUSG00000015869	protein_coding	Prpsap1	ENSMUST00000106391	protein_coding	principal1	11	-1	116490348	1841
ENSMUSG00000054099	protein_coding	Slc25a40	ENSMUST00000197006	retained_intron		5	1	8422873	4467
ENSMUSG00000094589	protein_coding	Vmn1r118	ENSMUST00000172322	protein_coding	principal1	7	-1	20912347	921
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000185401	retained_intron		7	1	127511983	2904
ENSMUSG00000032940	protein_coding	Rbm11	ENSMUST00000114249	protein_coding	alternative2	16	1	75592844	2750
ENSMUSG00000064246	protein_coding	Chil1	ENSMUST00000082060	protein_coding	principal2	1	1	134182404	1687
ENSMUSG00000015869	protein_coding	Prpsap1	ENSMUST00000140917	processed_transcript		11	-1	116478320	882
ENSMUSG00000007653	protein_coding	Gabrb2	ENSMUST00000007797	protein_coding	principal2	11	1	42419757	3989
ENSMUSG00000054099	protein_coding	Slc25a40	ENSMUST00000170496	protein_coding	principal1	5	1	8422899	2602
ENSMUSG00000015869	protein_coding	Prpsap1	ENSMUST00000147858	processed_transcript		11	-1	116473243	627
ENSMUSG00000099623	unprocessed_pseudogene	Gm4526	ENSMUST00000186039	unprocessed_pseudogene		7	-1	20940210	920
ENSMUSG00000026097	protein_coding	Ormdl1	ENSMUST00000027266	protein_coding	principal1	1	1	53297095	1910
ENSMUSG00000026427	protein_coding	Eif2d	ENSMUST00000149119	nonsense_mediated_decay		1	1	131153181	2504
ENSMUSG00000081695	processed_pseudogene	Rpsa-ps5	ENSMUST00000121462	processed_pseudogene		11	1	28956724	885
ENSMUSG00000015869	protein_coding	Prpsap1	ENSMUST00000142480	processed_transcript		11	-1	116477739	912
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000130113	retained_intron		16	1	23107771	698
ENSMUSG00000015869	protein_coding	Prpsap1	ENSMUST00000152496	protein_coding		11	-1	116494202	648
ENSMUSG00000115760	processed_pseudogene	Gm18909	ENSMUST00000227860	processed_pseudogene		14	-1	32156071	965
ENSMUSG00000109272	processed_pseudogene	Gm4528	ENSMUST00000207905	processed_pseudogene		7	1	20968224	551
ENSMUSG00000007653	protein_coding	Gabrb2	ENSMUST00000140463	processed_transcript		11	1	42419764	421
ENSMUSG00000054099	protein_coding	Slc25a40	ENSMUST00000198792	protein_coding		5	1	8424832	453
ENSMUSG00000026427	protein_coding	Eif2d	ENSMUST00000151874	nonsense_mediated_decay		1	1	131153181	3459
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000152129	retained_intron		16	1	23107773	566
ENSMUSG00000015869	protein_coding	Prpsap1	ENSMUST00000130835	processed_transcript		11	-1	116490289	884
ENSMUSG00000054099	protein_coding	Slc25a40	ENSMUST00000199532	retained_intron		5	1	8430126	422
ENSMUSG00000049106	protein_coding	Dcaf5	ENSMUST00000054145	protein_coding	principal1	12	-1	80436601	5706
ENSMUSG00000026427	protein_coding	Eif2d	ENSMUST00000068791	protein_coding		1	1	131153181	3316
ENSMUSG00000094010	protein_coding	Vmn1r119	ENSMUST00000164683	protein_coding	principal1	7	-1	21012455	924
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000149328	retained_intron		16	1	23107777	545
ENSMUSG00000054099	protein_coding	Slc25a40	ENSMUST00000198119	retained_intron		5	1	8443765	2639
ENSMUSG00000101838	transcribed_unprocessed_pseudogene	Gm18800	ENSMUST00000188688	transcribed_unprocessed_pseudogene		1	-1	53333343	1105
ENSMUSG00000032940	protein_coding	Rbm11	ENSMUST00000114253	protein_coding	principal2	16	1	75592891	2699
ENSMUSG00000026427	protein_coding	Eif2d	ENSMUST00000131855	nonsense_mediated_decay		1	1	131153181	3465
ENSMUSG00000036661	protein_coding	Dennd3	ENSMUST00000043414	protein_coding	principal1	15	1	73512560	5299
ENSMUSG00000084077	processed_pseudogene	Gm11952	ENSMUST00000121172	processed_pseudogene		11	1	3872955	821
ENSMUSG00000007653	protein_coding	Gabrb2	ENSMUST00000136050	processed_transcript		11	1	42421279	658
ENSMUSG00000030884	protein_coding	Uqcrc2	ENSMUST00000150675	processed_transcript		7	1	120635240	797
ENSMUSG00000072623	protein_coding	Zfp9	ENSMUST00000161170	protein_coding	principal1	6	-1	118479320	3968
ENSMUSG00000049106	protein_coding	Dcaf5	ENSMUST00000218728	processed_transcript		12	-1	80376692	411
ENSMUSG00000101838	transcribed_unprocessed_pseudogene	Gm18800	ENSMUST00000186588	processed_transcript		1	-1	53342186	637
ENSMUSG00000015869	protein_coding	Prpsap1	ENSMUST00000135196	protein_coding		11	-1	116490335	703
ENSMUSG00000030884	protein_coding	Uqcrc2	ENSMUST00000208400	protein_coding		7	1	120635263	462
ENSMUSG00000117809	protein_coding	Gm50478	ENSMUST00000236737	protein_coding	principal1	1	-1	53352619	300
ENSMUSG00000032940	protein_coding	Rbm11	ENSMUST00000046378	protein_coding	principal2	16	1	75592844	1400
ENSMUSG00000094501	unprocessed_pseudogene	Vmn1r-ps73	ENSMUST00000173130	unprocessed_pseudogene		7	-1	21036137	960
ENSMUSG00000049106	protein_coding	Dcaf5	ENSMUST00000218498	processed_transcript		12	-1	80436445	337
ENSMUSG00000112285	sense_intronic	Gm50278	ENSMUST00000218411	sense_intronic		12	-1	80391737	124
ENSMUSG00000072623	protein_coding	Zfp9	ENSMUST00000204066	retained_intron		6	-1	118468419	1641
ENSMUSG00000007653	protein_coding	Gabrb2	ENSMUST00000143626	processed_transcript		11	1	42421310	2709
ENSMUSG00000106817	processed_pseudogene	Gm43441	ENSMUST00000201458	processed_pseudogene		6	1	36587777	205
ENSMUSG00000015869	protein_coding	Prpsap1	ENSMUST00000144154	processed_transcript		11	-1	116490327	738
ENSMUSG00000007653	protein_coding	Gabrb2	ENSMUST00000192403	protein_coding	alternative1	11	1	42421350	1539
ENSMUSG00000021907	protein_coding	Msmb	ENSMUST00000022464	protein_coding	principal1	14	1	32142023	562
ENSMUSG00000109407	lincRNA	Gm34664	ENSMUST00000207661	lincRNA		7	-1	68916006	1032
ENSMUSG00000026427	protein_coding	Eif2d	ENSMUST00000153651	processed_transcript		1	1	131166379	739
ENSMUSG00000109407	lincRNA	Gm34664	ENSMUST00000208503	lincRNA		7	-1	68916008	1015
ENSMUSG00000112278	antisense	Gm30025	ENSMUST00000218555	antisense		12	1	80435209	728
ENSMUSG00000010797	protein_coding	Wnt2	ENSMUST00000010941	protein_coding	principal1	6	-1	18030585	2255
ENSMUSG00000036661	protein_coding	Dennd3	ENSMUST00000173292	nonsense_mediated_decay		15	1	73512672	5172
ENSMUSG00000106872	processed_pseudogene	Gm2189	ENSMUST00000201419	processed_pseudogene		6	-1	36640266	429
ENSMUSG00000086826	antisense	Gm11739	ENSMUST00000125269	antisense		11	1	116466319	723
ENSMUSG00000025375	protein_coding	Aatk	ENSMUST00000103019	protein_coding	principal3	11	-1	120041782	5177
ENSMUSG00000036661	protein_coding	Dennd3	ENSMUST00000162824	processed_transcript		15	1	73518614	424
ENSMUSG00000084787	lincRNA	Gm12436	ENSMUST00000131099	lincRNA		4	1	48898593	2959
ENSMUSG00000109407	lincRNA	Gm34664	ENSMUST00000207409	lincRNA		7	-1	68916016	558
ENSMUSG00000021907	protein_coding	Msmb	ENSMUST00000130397	processed_transcript		14	1	32147587	537
ENSMUSG00000083869	processed_pseudogene	Gm12442	ENSMUST00000118372	processed_pseudogene		4	1	48972978	338
ENSMUSG00000109407	lincRNA	Gm34664	ENSMUST00000208180	lincRNA		7	-1	68914598	336
ENSMUSG00000093986	protein_coding	Vmn1r120	ENSMUST00000105202	protein_coding	principal1	7	-1	21053784	918
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000123413	nonsense_mediated_decay		16	1	23107777	1965
ENSMUSG00000118520	processed_pseudogene	AC140192.1	ENSMUST00000239020	processed_pseudogene		6	1	118486453	1978
ENSMUSG00000109524	lincRNA	Gm44691	ENSMUST00000207562	lincRNA		7	1	68989404	324
ENSMUSG00000030884	protein_coding	Uqcrc2	ENSMUST00000123704	processed_transcript		7	1	120635515	832
ENSMUSG00000055456	TEC	Gm9972	ENSMUST00000069051	TEC		11	1	43035746	1533
ENSMUSG00000036661	protein_coding	Dennd3	ENSMUST00000162488	processed_transcript		15	1	73524134	2197
ENSMUSG00000055102	protein_coding	Zfp819	ENSMUST00000120935	protein_coding		7	1	43607169	2156
ENSMUSG00000092616	unprocessed_pseudogene	Vmn1r-ps74	ENSMUST00000173518	unprocessed_pseudogene		7	1	21092110	570
ENSMUSG00000025375	protein_coding	Aatk	ENSMUST00000103020	protein_coding	principal3	11	-1	120047145	5687
ENSMUSG00000030884	protein_coding	Uqcrc2	ENSMUST00000137808	retained_intron		7	1	120644918	486
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000131871	nonsense_mediated_decay		16	1	23107778	1737
ENSMUSG00000100499	lincRNA	Gm28460	ENSMUST00000186085	lincRNA		Y	1	45811680	433
ENSMUSG00000100499	lincRNA	Gm28460	ENSMUST00000190590	lincRNA		Y	1	45811680	618
ENSMUSG00000089814	transcribed_processed_pseudogene	Gm15310	ENSMUST00000117891	transcribed_processed_pseudogene		16	-1	94359312	372
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000130483	retained_intron		16	1	23107779	487
ENSMUSG00000098017	processed_pseudogene	Gm5342	ENSMUST00000181982	processed_pseudogene		7	1	69209884	1003
ENSMUSG00000036661	protein_coding	Dennd3	ENSMUST00000160267	nonsense_mediated_decay		15	1	73557636	658
ENSMUSG00000066772	protein_coding	Obox3	ENSMUST00000174443	protein_coding	principal1	7	-1	15627876	1979
ENSMUSG00000085951	lincRNA	Gm12145	ENSMUST00000142108	lincRNA		11	-1	43116294	217
ENSMUSG00000030884	protein_coding	Uqcrc2	ENSMUST00000131191	retained_intron		7	1	120651280	606
ENSMUSG00000066772	protein_coding	Obox3	ENSMUST00000182148	retained_intron		7	-1	15627766	2287
ENSMUSG00000025375	protein_coding	Aatk	ENSMUST00000136386	processed_transcript		11	-1	120016897	781
ENSMUSG00000036661	protein_coding	Dennd3	ENSMUST00000159322	retained_intron		15	1	73564862	357
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000142031	processed_transcript		16	1	23107917	583
ENSMUSG00000036661	protein_coding	Dennd3	ENSMUST00000160727	retained_intron		15	1	73567078	559
ENSMUSG00000092203	processed_transcript	1110038B12Rik	ENSMUST00000174464	retained_intron		17	-1	34951244	785
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000135020	retained_intron		16	1	23108582	536
ENSMUSG00000025375	protein_coding	Aatk	ENSMUST00000132575	protein_coding		11	-1	120017156	815
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000125553	retained_intron		16	1	23109231	611
ENSMUSG00000055102	protein_coding	Zfp819	ENSMUST00000127765	protein_coding		7	1	43607209	527
ENSMUSG00000085857	antisense	Gm15392	ENSMUST00000152863	antisense		1	-1	121493203	778
ENSMUSG00000025375	protein_coding	Aatk	ENSMUST00000128836	retained_intron		11	-1	120016872	553
ENSMUSG00000025375	protein_coding	Aatk	ENSMUST00000134319	protein_coding		11	-1	120020168	365
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000119523	protein_coding		5	-1	43782143	2801
ENSMUSG00000115115	protein_coding	AL607142.1	ENSMUST00000226560	protein_coding	principal1	4	1	120064996	78
ENSMUSG00000055102	protein_coding	Zfp819	ENSMUST00000032661	protein_coding	principal1	7	1	43607225	2362
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000148085	retained_intron		16	1	23109976	1655
ENSMUSG00000055102	protein_coding	Zfp819	ENSMUST00000116324	protein_coding	principal1	7	1	43609907	1824
ENSMUSG00000018167	protein_coding	Stard3	ENSMUST00000154960	processed_transcript		11	1	98358431	2170
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000156227	retained_intron		16	1	23110045	516
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000125969	retained_intron		16	1	23110233	756
ENSMUSG00000018167	protein_coding	Stard3	ENSMUST00000152559	processed_transcript		11	1	98358444	813
ENSMUSG00000028634	protein_coding	Hivep3	ENSMUST00000144907	processed_transcript		4	1	119733784	270
ENSMUSG00000068341	protein_coding	Reg3d	ENSMUST00000089667	protein_coding	principal1	6	-1	78378865	782
ENSMUSG00000021635	protein_coding	Rad17	ENSMUST00000022136	protein_coding	principal1	13	-1	100651051	2839
ENSMUSG00000083766	processed_pseudogene	Gm15335	ENSMUST00000122442	processed_pseudogene		18	-1	38718128	411
ENSMUSG00000018167	protein_coding	Stard3	ENSMUST00000148738	processed_transcript		11	1	98376447	1096
ENSMUSG00000086991	antisense	Gm15334	ENSMUST00000131421	antisense		18	-1	38994192	325
ENSMUSG00000068341	protein_coding	Reg3d	ENSMUST00000205240	protein_coding		6	-1	78378513	544
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000150117	retained_intron		16	1	23110672	643
ENSMUSG00000018167	protein_coding	Stard3	ENSMUST00000155063	processed_transcript		11	1	98358430	751
ENSMUSG00000068341	protein_coding	Reg3d	ENSMUST00000167492	protein_coding		6	-1	78378865	644
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000144493	retained_intron		16	1	23110699	770
ENSMUSG00000018167	protein_coding	Stard3	ENSMUST00000130323	processed_transcript		11	1	98375520	831
ENSMUSG00000029838	protein_coding	Ptn	ENSMUST00000101534	protein_coding	principal1	6	-1	36810220	1614
ENSMUSG00000018167	protein_coding	Stard3	ENSMUST00000143243	processed_transcript		11	1	98378156	694
ENSMUSG00000118193	protein_coding	Arhgap26	ENSMUST00000148850	protein_coding	principal1	18	1	38676718	570
ENSMUSG00000108457	unprocessed_pseudogene	Gm5027	ENSMUST00000206700	unprocessed_pseudogene		11	-1	59603293	375
ENSMUSG00000112242	lincRNA	Gm10747	ENSMUST00000217799	lincRNA		10	1	117043746	1014
ENSMUSG00000029838	protein_coding	Ptn	ENSMUST00000201321	protein_coding		6	-1	36810179	2558
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000141902	protein_coding		5	-1	43773600	2517
ENSMUSG00000085289	antisense	Gm15337	ENSMUST00000135378	antisense		18	-1	39389425	3888
ENSMUSG00000044061	polymorphic_pseudogene	Olfr225	ENSMUST00000213169	polymorphic_pseudogene		11	1	59610585	2658
ENSMUSG00000021635	protein_coding	Rad17	ENSMUST00000226050	nonsense_mediated_decay		13	-1	100651002	2745
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000168891	protein_coding		16	1	23107479	2203
ENSMUSG00000044061	polymorphic_pseudogene	Olfr225	ENSMUST00000055276	protein_coding	principal1	11	1	59612966	1260
ENSMUSG00000086312	antisense	Gm15336	ENSMUST00000128894	antisense		18	-1	39302690	1571
ENSMUSG00000094680	protein_coding	Vmn1r121	ENSMUST00000105197	protein_coding	principal1	7	-1	21098513	945
ENSMUSG00000060187	protein_coding	Lrrc10	ENSMUST00000073834	protein_coding	principal1	10	1	117045341	1428
ENSMUSG00000021635	protein_coding	Rad17	ENSMUST00000177848	protein_coding	principal1	13	-1	100651047	2392
ENSMUSG00000028427	protein_coding	Aqp7	ENSMUST00000030136	protein_coding	principal1	4	-1	41048139	2527
ENSMUSG00000022884	protein_coding	Eif4a2	ENSMUST00000187168	protein_coding		16	1	23107758	1238
ENSMUSG00000118257	lincRNA	9630014M24Rik	ENSMUST00000145090	lincRNA		18	1	38601534	3867
ENSMUSG00000021635	protein_coding	Rad17	ENSMUST00000225428	retained_intron		13	-1	100624594	2615
ENSMUSG00000021635	protein_coding	Rad17	ENSMUST00000225155	retained_intron		13	-1	100632375	2860
ENSMUSG00000028427	protein_coding	Aqp7	ENSMUST00000054945	protein_coding	principal1	4	-1	41045448	2154
ENSMUSG00000030472	protein_coding	Ceacam18	ENSMUST00000032663	protein_coding	principal1	7	1	43634707	1970
ENSMUSG00000063087	processed_transcript	Gm10125	ENSMUST00000161921	antisense		18	-1	5592393	1463
ENSMUSG00000118257	lincRNA	9630014M24Rik	ENSMUST00000127448	lincRNA		18	1	38601603	768
ENSMUSG00000063087	processed_transcript	Gm10125	ENSMUST00000177190	retained_intron		18	-1	5521109	2695
ENSMUSG00000063087	processed_transcript	Gm10125	ENSMUST00000160925	antisense		18	-1	5592191	252
ENSMUSG00000118257	lincRNA	9630014M24Rik	ENSMUST00000149112	lincRNA		18	1	38627287	737
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000020734	protein_coding		11	1	3202392	3565
ENSMUSG00000118257	lincRNA	9630014M24Rik	ENSMUST00000134388	lincRNA		18	1	38676718	696
ENSMUSG00000066772	protein_coding	Obox3	ENSMUST00000173912	protein_coding	principal1	7	-1	15639902	1244
ENSMUSG00000028427	protein_coding	Aqp7	ENSMUST00000144201	processed_transcript		4	-1	41040967	665
ENSMUSG00000028427	protein_coding	Aqp7	ENSMUST00000149517	processed_transcript		4	-1	41036310	444
ENSMUSG00000113959	TEC	Gm46339	ENSMUST00000222720	TEC		12	1	19301653	3539
ENSMUSG00000063087	processed_transcript	Gm10125	ENSMUST00000074702	antisense		18	-1	5592382	2286
ENSMUSG00000030887	protein_coding	Pdzd9	ENSMUST00000033178	protein_coding	principal1	7	-1	120670343	2180
ENSMUSG00000027386	protein_coding	Fbln7	ENSMUST00000110324	protein_coding	principal1	2	1	128862981	3228
ENSMUSG00000001986	protein_coding	Gria3	ENSMUST00000128197	retained_intron		X	1	41400854	5108
ENSMUSG00000063087	processed_transcript	Gm10125	ENSMUST00000161096	antisense		18	-1	5593505	3493
ENSMUSG00000063087	processed_transcript	Gm10125	ENSMUST00000234537	antisense		18	-1	5592246	1130
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000115574	retained_intron		18	1	38993145	1159
ENSMUSG00000063087	processed_transcript	Gm10125	ENSMUST00000161383	antisense		18	-1	5592190	664
ENSMUSG00000079516	protein_coding	Reg3a	ENSMUST00000101272	protein_coding	principal1	6	1	78380709	825
ENSMUSG00000063087	processed_transcript	Gm10125	ENSMUST00000178464	processed_transcript		18	-1	5592393	611
ENSMUSG00000027386	protein_coding	Fbln7	ENSMUST00000028864	protein_coding	principal1	2	1	128863932	2905
ENSMUSG00000113814	unprocessed_pseudogene	Gm9255	ENSMUST00000223225	unprocessed_pseudogene		12	1	19329058	581
ENSMUSG00000045316	protein_coding	Fahd1	ENSMUST00000049642	protein_coding	principal1	17	-1	24850364	1473
ENSMUSG00000028634	protein_coding	Hivep3	ENSMUST00000141605	processed_transcript		4	1	119733784	1115
ENSMUSG00000097926	sense_intronic	Gm26575	ENSMUST00000181714	sense_intronic		18	-1	5575055	2232
ENSMUSG00000066772	protein_coding	Obox3	ENSMUST00000173395	protein_coding		7	-1	15639777	799
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000224200	nonsense_mediated_decay		18	1	5591860	266
ENSMUSG00000026096	protein_coding	Osgepl1	ENSMUST00000027265	protein_coding	principal1	1	1	53313624	1868
ENSMUSG00000030887	protein_coding	Pdzd9	ENSMUST00000127845	protein_coding		7	-1	120670250	1327
ENSMUSG00000063446	protein_coding	Plppr1	ENSMUST00000076670	protein_coding	principal1	4	1	49059282	3940
ENSMUSG00000028634	protein_coding	Hivep3	ENSMUST00000123698	processed_transcript		4	1	119733841	500
ENSMUSG00000030887	protein_coding	Pdzd9	ENSMUST00000208635	protein_coding		7	-1	120670339	1238
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000125224	retained_intron		11	1	3202663	2546
ENSMUSG00000066772	protein_coding	Obox3	ENSMUST00000174151	protein_coding		7	-1	15639777	743
ENSMUSG00000028634	protein_coding	Hivep3	ENSMUST00000125069	processed_transcript		4	1	119761245	520
ENSMUSG00000066772	protein_coding	Obox3	ENSMUST00000174842	protein_coding		7	-1	15639416	528
ENSMUSG00000063446	protein_coding	Plppr1	ENSMUST00000137884	retained_intron		4	1	49059273	2558
ENSMUSG00000108935	antisense	4930588G17Rik	ENSMUST00000208075	antisense		7	1	120670296	1474
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000145890	nonsense_mediated_decay		10	-1	75517273	2816
ENSMUSG00000063446	protein_coding	Plppr1	ENSMUST00000151692	retained_intron		4	1	49059456	1808
ENSMUSG00000066772	protein_coding	Obox3	ENSMUST00000095217	protein_coding	principal1	7	-1	15639777	1603
ENSMUSG00000028634	protein_coding	Hivep3	ENSMUST00000143837	processed_transcript		4	1	119814331	1719
ENSMUSG00000078941	protein_coding	Ak6	ENSMUST00000022135	protein_coding	principal1	13	1	100650979	1298
ENSMUSG00000006019	protein_coding	Dhx34	ENSMUST00000128452	retained_intron		7	-1	16204201	1616
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000153125	protein_coding		10	-1	75511281	2381
ENSMUSG00000028634	protein_coding	Hivep3	ENSMUST00000136547	processed_transcript		4	1	119814355	1359
ENSMUSG00000097343	processed_transcript	9030407P20Rik	ENSMUST00000180933	lincRNA		7	-1	120677520	2310
ENSMUSG00000066772	protein_coding	Obox3	ENSMUST00000086122	protein_coding	principal1	7	-1	15627876	1890
ENSMUSG00000093719	unprocessed_pseudogene	Obox4-ps30	ENSMUST00000176032	unprocessed_pseudogene		7	1	15501822	948
ENSMUSG00000078941	protein_coding	Ak6	ENSMUST00000185901	retained_intron		13	1	100651362	452
ENSMUSG00000093513	unprocessed_pseudogene	Obox4-ps31	ENSMUST00000177210	unprocessed_pseudogene		7	1	15589653	1137
ENSMUSG00000097343	processed_transcript	9030407P20Rik	ENSMUST00000180977	lincRNA		7	-1	120677570	1812
ENSMUSG00000097343	processed_transcript	9030407P20Rik	ENSMUST00000207861	retained_intron		7	-1	120676694	591
ENSMUSG00000078941	protein_coding	Ak6	ENSMUST00000190729	protein_coding		13	1	100651380	1184
ENSMUSG00000078941	protein_coding	Ak6	ENSMUST00000190210	retained_intron		13	1	100651626	538
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000039796	protein_coding	principal1	10	-1	75517381	3500
ENSMUSG00000027164	protein_coding	Traf6	ENSMUST00000143341	processed_transcript		2	1	101678429	1949
ENSMUSG00000026096	protein_coding	Osgepl1	ENSMUST00000151296	nonsense_mediated_decay		1	1	53313654	1592
ENSMUSG00000078941	protein_coding	Ak6	ENSMUST00000084721	protein_coding		13	1	100651343	1222
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000196483	protein_coding	alternative1	5	-1	43782109	2814
ENSMUSG00000070369	protein_coding	Itgad	ENSMUST00000106237	protein_coding	alternative2	7	1	128154376	4105
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000110049	protein_coding	principal1	11	1	3202663	3614
ENSMUSG00000026430	protein_coding	Rassf5	ENSMUST00000068564	protein_coding		1	-1	131200135	3076
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000131693	retained_intron		11	1	3202689	405
ENSMUSG00000026096	protein_coding	Osgepl1	ENSMUST00000135786	processed_transcript		1	1	53313657	598
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000125637	protein_coding		11	1	3202734	869
ENSMUSG00000026096	protein_coding	Osgepl1	ENSMUST00000153939	retained_intron		1	1	53313657	4005
ENSMUSG00000027387	protein_coding	Zc3h8	ENSMUST00000028866	protein_coding	principal1	2	-1	128944077	1624
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000118936	protein_coding		10	-1	75517972	2843
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000047857	protein_coding	principal2	5	-1	43782150	2858
ENSMUSG00000070369	protein_coding	Itgad	ENSMUST00000033051	protein_coding	principal2	7	1	128173946	3965
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000219774	protein_coding		10	-1	75517298	806
ENSMUSG00000026096	protein_coding	Osgepl1	ENSMUST00000114484	protein_coding	principal1	1	1	53313663	2283
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000114047	protein_coding		5	-1	43821638	2762
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000110048	protein_coding		11	1	3203021	3712
ENSMUSG00000070369	protein_coding	Itgad	ENSMUST00000177111	protein_coding	alternative2	7	1	128173955	3845
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000025081	protein_coding	principal1	18	1	5591864	5801
ENSMUSG00000070369	protein_coding	Itgad	ENSMUST00000177383	protein_coding		7	1	128203612	653
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000124610	protein_coding		5	-1	43782102	2306
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000138122	nonsense_mediated_decay		10	-1	75517289	879
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000120721	protein_coding		11	1	3203630	2952
ENSMUSG00000070369	protein_coding	Itgad	ENSMUST00000176249	protein_coding		7	1	128203874	404
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000129307	retained_intron		10	-1	75511264	814
ENSMUSG00000057561	protein_coding	Eif1a	ENSMUST00000238168	protein_coding	principal1	18	1	46597701	2012
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000128419	protein_coding		10	-1	75517170	478
ENSMUSG00000026096	protein_coding	Osgepl1	ENSMUST00000135614	nonsense_mediated_decay		1	1	53313673	1723
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000160522	retained_intron		18	1	5591872	1938
ENSMUSG00000108604	antisense	Gm44850	ENSMUST00000205621	antisense		7	-1	128220788	1329
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000159390	protein_coding		18	1	5591891	900
ENSMUSG00000026430	protein_coding	Rassf5	ENSMUST00000027688	protein_coding	principal1	1	-1	131245258	3485
ENSMUSG00000092203	processed_transcript	1110038B12Rik	ENSMUST00000174714	lincRNA		17	-1	34952448	520
ENSMUSG00000026096	protein_coding	Osgepl1	ENSMUST00000150115	retained_intron		1	1	53319709	1067
ENSMUSG00000028634	protein_coding	Hivep3	ENSMUST00000106307	protein_coding	principal1	4	1	119814495	11838
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000132425	retained_intron		11	1	3227767	301
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000188124	protein_coding		7	1	127511983	2048
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000147269	protein_coding		10	-1	75517886	626
ENSMUSG00000028634	protein_coding	Hivep3	ENSMUST00000227491	processed_transcript		4	1	120032766	397
ENSMUSG00000026430	protein_coding	Rassf5	ENSMUST00000112442	protein_coding		1	-1	131245258	3388
ENSMUSG00000026430	protein_coding	Rassf5	ENSMUST00000212202	protein_coding		1	-1	131233575	958
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000189136	protein_coding		7	1	127512002	1960
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000143770	retained_intron		11	1	3227767	437
ENSMUSG00000028634	protein_coding	Hivep3	ENSMUST00000166542	protein_coding	principal1	4	1	120094489	7253
ENSMUSG00000099913	protein_coding	Gm28551	ENSMUST00000144660	nonsense_mediated_decay	principal1	1	-1	53352667	3142
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000123505	protein_coding		10	-1	75517856	745
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000187442	processed_transcript		7	1	127512112	513
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000135223	protein_coding		11	1	3227813	718
ENSMUSG00000026430	protein_coding	Rassf5	ENSMUST00000124796	processed_transcript		1	-1	131245258	763
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000087465	protein_coding		5	-1	43782121	4237
ENSMUSG00000101729	processed_pseudogene	Gm17796	ENSMUST00000189015	processed_pseudogene		1	1	131216877	1213
ENSMUSG00000028634	protein_coding	Hivep3	ENSMUST00000084306	protein_coding		4	1	119733796	2973
ENSMUSG00000057561	protein_coding	Eif1a	ENSMUST00000078079	protein_coding	principal1	18	1	46597704	2865
ENSMUSG00000033416	protein_coding	Gucd1	ENSMUST00000136763	nonsense_mediated_decay		10	-1	75517260	450
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000189449	processed_transcript		7	1	127512301	276
ENSMUSG00000109400	processed_pseudogene	Gm44533	ENSMUST00000207782	processed_pseudogene		7	1	69259595	268
ENSMUSG00000112764	processed_pseudogene	Gm48158	ENSMUST00000218219	processed_pseudogene		10	-1	75483392	303
ENSMUSG00000110028	lincRNA	Gm34838	ENSMUST00000209231	lincRNA		7	-1	69396932	958
ENSMUSG00000100679	protein_coding	Gm28778	ENSMUST00000190734	protein_coding	principal1	1	1	53297111	785
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000175925	nonsense_mediated_decay		18	1	5591891	1485
ENSMUSG00000057561	protein_coding	Eif1a	ENSMUST00000235849	protein_coding		18	1	46597710	726
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000127950	retained_intron		11	1	3234219	813
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000121736	protein_coding		5	-1	43782137	2144
ENSMUSG00000109153	lincRNA	Gm38584	ENSMUST00000207361	lincRNA		7	-1	69490801	517
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000147534	retained_intron		11	1	3235545	297
ENSMUSG00000030785	protein_coding	Cox6a2	ENSMUST00000033049	protein_coding	principal1	7	-1	128206387	680
ENSMUSG00000057561	protein_coding	Eif1a	ENSMUST00000235973	protein_coding	principal1	18	1	46597725	2651
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000140469	retained_intron		5	-1	43759884	397
ENSMUSG00000057561	protein_coding	Eif1a	ENSMUST00000235455	protein_coding	principal1	18	1	46597755	1905
ENSMUSG00000057561	protein_coding	Eif1a	ENSMUST00000237478	protein_coding		18	1	46597798	2165
ENSMUSG00000015176	protein_coding	Nolc1	ENSMUST00000223741	protein_coding		19	1	46075880	741
ENSMUSG00000057561	protein_coding	Eif1a	ENSMUST00000236497	protein_coding		18	1	46598014	757
ENSMUSG00000020454	protein_coding	Eif4enif1	ENSMUST00000179770	protein_coding	principal1	11	1	3202995	3676
ENSMUSG00000108531	antisense	Gm39091	ENSMUST00000206189	antisense		7	-1	128184096	553
ENSMUSG00000082658	processed_pseudogene	Fau-ps2	ENSMUST00000119333	processed_pseudogene		11	-1	3196824	371
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000161295	nonsense_mediated_decay		18	1	5591912	1215
ENSMUSG00000108354	processed_transcript	4931431B13Rik	ENSMUST00000205646	antisense		7	-1	128203328	473
ENSMUSG00000022940	protein_coding	Pigp	ENSMUST00000113917	protein_coding		16	-1	94370289	805
ENSMUSG00000057561	protein_coding	Eif1a	ENSMUST00000168382	protein_coding	principal1	18	1	46597708	1750
ENSMUSG00000108354	processed_transcript	4931431B13Rik	ENSMUST00000205522	retained_intron		7	-1	128203324	1150
ENSMUSG00000097986	lincRNA	Gm26953	ENSMUST00000212599	lincRNA		5	1	112215461	1435
ENSMUSG00000097986	lincRNA	Gm26953	ENSMUST00000212526	lincRNA		5	1	112216548	553
ENSMUSG00000087111	antisense	Gm11399	ENSMUST00000131021	antisense		11	1	3142048	324
ENSMUSG00000097986	lincRNA	Gm26953	ENSMUST00000212309	lincRNA		5	1	112217054	858
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000143316	retained_intron		5	-1	43782102	2731
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000175739	processed_transcript		18	1	5593308	790
ENSMUSG00000022881	protein_coding	Rfc4	ENSMUST00000023598	protein_coding	principal1	16	-1	23127737	1228
ENSMUSG00000097986	lincRNA	Gm26953	ENSMUST00000212928	lincRNA		5	1	112217054	1174
ENSMUSG00000096476	processed_pseudogene	Gm12453	ENSMUST00000121981	processed_pseudogene		4	1	49342248	331
ENSMUSG00000112431	TEC	Gm10741	ENSMUST00000218151	TEC		10	-1	121161529	1748
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000160910	protein_coding		18	1	5593602	774
ENSMUSG00000097986	lincRNA	Gm26953	ENSMUST00000213051	lincRNA		5	1	112217054	2087
ENSMUSG00000097986	lincRNA	Gm26953	ENSMUST00000212464	lincRNA		5	1	112217054	1225
ENSMUSG00000027164	protein_coding	Traf6	ENSMUST00000004949	protein_coding	principal1	2	1	101678440	6169
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000124421	retained_intron		5	-1	43782118	3833
ENSMUSG00000112415	TEC	Gm48426	ENSMUST00000219190	TEC		10	-1	121185511	482
ENSMUSG00000039753	protein_coding	Fbxl5	ENSMUST00000199055	protein_coding		5	-1	43782100	374
ENSMUSG00000092203	processed_transcript	1110038B12Rik	ENSMUST00000173811	retained_intron		17	-1	34952456	747
ENSMUSG00000097986	lincRNA	Gm26953	ENSMUST00000182389	lincRNA		5	1	112217060	390
ENSMUSG00000097986	lincRNA	Gm26953	ENSMUST00000212840	lincRNA		5	1	112217065	619
ENSMUSG00000048292	protein_coding	Olfr1417	ENSMUST00000213141	processed_transcript		19	-1	11829642	2239
ENSMUSG00000033427	protein_coding	Upb1	ENSMUST00000219052	protein_coding		10	1	75401115	525
ENSMUSG00000097986	lincRNA	Gm26953	ENSMUST00000213040	lincRNA		5	1	112217065	452
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000177070	processed_transcript		18	1	5593861	819
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000162892	processed_transcript		18	1	5594203	2464
ENSMUSG00000048292	protein_coding	Olfr1417	ENSMUST00000214887	protein_coding	principal1	19	-1	11839219	3582
ENSMUSG00000022881	protein_coding	Rfc4	ENSMUST00000115338	protein_coding		16	-1	23127717	1279
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000159477	processed_transcript		18	1	5603744	1610
ENSMUSG00000027164	protein_coding	Traf6	ENSMUST00000144063	processed_transcript		2	1	101684215	763
ENSMUSG00000024238	protein_coding	Zeb1	ENSMUST00000177030	processed_transcript		18	1	5731081	2768
ENSMUSG00000092203	processed_transcript	1110038B12Rik	ENSMUST00000173070	lincRNA		17	-1	34952471	434
ENSMUSG00000048292	protein_coding	Olfr1417	ENSMUST00000061235	protein_coding	principal1	19	-1	11829024	948
ENSMUSG00000090078	processed_pseudogene	Gm16147	ENSMUST00000162143	processed_pseudogene		18	-1	5611930	373
ENSMUSG00000022881	protein_coding	Rfc4	ENSMUST00000147321	retained_intron		16	-1	23114744	449
ENSMUSG00000081770	processed_pseudogene	Rbpj-ps1	ENSMUST00000119456	processed_pseudogene		4	1	49350522	1006
ENSMUSG00000092203	processed_transcript	1110038B12Rik	ENSMUST00000174039	retained_intron		17	-1	34952434	934
ENSMUSG00000103138	TEC	Gm2238	ENSMUST00000192074	TEC		18	-1	5591711	3669
ENSMUSG00000112271	processed_pseudogene	Gm9088	ENSMUST00000220237	processed_pseudogene		12	-1	3932040	508
ENSMUSG00000030643	protein_coding	Rab30	ENSMUST00000032879	protein_coding	principal1	7	1	92741603	9456
ENSMUSG00000054310	protein_coding	Obox1	ENSMUST00000172881	protein_coding	principal1	7	1	15512340	821
ENSMUSG00000022881	protein_coding	Rfc4	ENSMUST00000133847	protein_coding		16	-1	23127691	862
ENSMUSG00000029082	protein_coding	Bst1	ENSMUST00000126976	nonsense_mediated_decay		5	1	43818885	512
ENSMUSG00000060556	protein_coding	Olfr1418	ENSMUST00000214796	protein_coding	principal1	19	-1	11861066	4046
ENSMUSG00000030643	protein_coding	Rab30	ENSMUST00000208470	processed_transcript		7	1	92741667	436
ENSMUSG00000060556	protein_coding	Olfr1418	ENSMUST00000079875	protein_coding	principal1	19	-1	11856001	1072
ENSMUSG00000022881	protein_coding	Rfc4	ENSMUST00000115337	nonsense_mediated_decay		16	-1	23127728	501
ENSMUSG00000104289	lincRNA	Gm37454	ENSMUST00000193918	lincRNA		Y	-1	23542427	1498
ENSMUSG00000030643	protein_coding	Rab30	ENSMUST00000208945	protein_coding		7	1	92777583	437
ENSMUSG00000108966	unprocessed_pseudogene	Gm45119	ENSMUST00000207612	unprocessed_pseudogene		19	-1	11864634	199
ENSMUSG00000066178	lincRNA	6030445D17Rik	ENSMUST00000084593	lincRNA		4	1	136462250	1728
ENSMUSG00000030643	protein_coding	Rab30	ENSMUST00000107180	protein_coding	principal1	7	1	92819905	1406
ENSMUSG00000054310	protein_coding	Obox1	ENSMUST00000067288	protein_coding	principal1	7	1	15546982	1512
ENSMUSG00000117780	lincRNA	Gm3734	ENSMUST00000236340	lincRNA		18	1	46630807	2424
ENSMUSG00000030643	protein_coding	Rab30	ENSMUST00000107179	protein_coding		7	1	92819920	1304
ENSMUSG00000104289	lincRNA	Gm37454	ENSMUST00000192136	lincRNA		Y	-1	23541974	621
ENSMUSG00000026890	protein_coding	Lhx6	ENSMUST00000112961	protein_coding		2	-1	36104060	3292
ENSMUSG00000104289	lincRNA	Gm37454	ENSMUST00000195154	lincRNA		Y	-1	23541974	437
ENSMUSG00000109257	TEC	Gm45200	ENSMUST00000207434	TEC		7	1	92778505	919
ENSMUSG00000102730	unprocessed_pseudogene	Gm38138	ENSMUST00000193274	unprocessed_pseudogene		Y	1	23611872	696
ENSMUSG00000054310	protein_coding	Obox1	ENSMUST00000172463	protein_coding	principal1	7	1	15547277	783
ENSMUSG00000067545	protein_coding	Olfr1419	ENSMUST00000217617	protein_coding	principal1	19	-1	11875106	3087
ENSMUSG00000067545	protein_coding	Olfr1419	ENSMUST00000213954	protein_coding	principal1	19	-1	11875089	2918
ENSMUSG00000054310	protein_coding	Obox1	ENSMUST00000173443	protein_coding	principal1	7	1	15547302	835
ENSMUSG00000054310	protein_coding	Obox1	ENSMUST00000173245	protein_coding		7	1	15548411	749
ENSMUSG00000031628	protein_coding	Casp3	ENSMUST00000211115	protein_coding	principal1	8	1	46617291	2601
ENSMUSG00000067545	protein_coding	Olfr1419	ENSMUST00000087857	protein_coding	principal1	19	-1	11871305	1160
ENSMUSG00000074591	protein_coding	Ankub1	ENSMUST00000238789	protein_coding	principal5	3	-1	57692535	1862
ENSMUSG00000006019	protein_coding	Dhx34	ENSMUST00000121123	protein_coding	alternative2	7	-1	16222037	3880
ENSMUSG00000038745	protein_coding	Nlrp6	ENSMUST00000183845	protein_coding	principal2	7	1	140920902	4436
ENSMUSG00000054310	protein_coding	Obox1	ENSMUST00000181001	protein_coding	principal1	7	1	15388948	1217
ENSMUSG00000092203	processed_transcript	1110038B12Rik	ENSMUST00000172501	lincRNA		17	-1	34952468	579
ENSMUSG00000038745	protein_coding	Nlrp6	ENSMUST00000184560	protein_coding	alternative2	7	1	140921071	3178
ENSMUSG00000074591	protein_coding	Ankub1	ENSMUST00000200665	nonsense_mediated_decay		3	-1	57692799	2016
ENSMUSG00000092203	processed_transcript	1110038B12Rik	ENSMUST00000174173	retained_intron		17	-1	34952468	635
ENSMUSG00000093421	unprocessed_pseudogene	Obox3-ps6	ENSMUST00000176273	unprocessed_pseudogene		7	-1	15481781	1005
ENSMUSG00000038745	protein_coding	Nlrp6	ENSMUST00000183761	retained_intron		7	1	140922106	534
ENSMUSG00000006019	protein_coding	Dhx34	ENSMUST00000118795	protein_coding	alternative2	7	-1	16221993	4076
ENSMUSG00000095274	unprocessed_pseudogene	Obox4-ps27	ENSMUST00000179203	unprocessed_pseudogene		7	1	15431662	1362
ENSMUSG00000006019	protein_coding	Dhx34	ENSMUST00000119102	protein_coding	alternative2	7	-1	16221993	4310
ENSMUSG00000026890	protein_coding	Lhx6	ENSMUST00000112966	protein_coding		2	-1	36104060	3188
ENSMUSG00000074591	protein_coding	Ankub1	ENSMUST00000197088	protein_coding	alternative2	3	-1	57692535	1854
ENSMUSG00000029664	protein_coding	Tfpi2	ENSMUST00000031674	protein_coding	principal1	6	-1	3968376	1530
ENSMUSG00000031628	protein_coding	Casp3	ENSMUST00000093517	protein_coding	principal1	8	1	46617395	1520
ENSMUSG00000006019	protein_coding	Dhx34	ENSMUST00000133518	processed_transcript		7	-1	16213185	652
ENSMUSG00000092203	processed_transcript	1110038B12Rik	ENSMUST00000172531	retained_intron		17	-1	34952462	691
ENSMUSG00000023908	protein_coding	Pkmyt1	ENSMUST00000024701	protein_coding	principal1	17	1	23726336	2040
ENSMUSG00000029664	protein_coding	Tfpi2	ENSMUST00000203257	protein_coding		6	-1	3988858	636
ENSMUSG00000038745	protein_coding	Nlrp6	ENSMUST00000106045	protein_coding	alternative2	7	1	140920902	3823
ENSMUSG00000092557	processed_pseudogene	Gm8696	ENSMUST00000174777	processed_pseudogene		17	-1	34954712	385
ENSMUSG00000006019	protein_coding	Dhx34	ENSMUST00000094816	protein_coding	principal2	7	-1	16221993	4073
ENSMUSG00000015312	protein_coding	Gadd45b	ENSMUST00000015456	protein_coding	principal1	10	1	80930073	1284
ENSMUSG00000074591	protein_coding	Ankub1	ENSMUST00000099091	protein_coding		3	-1	57692537	2696
ENSMUSG00000029664	protein_coding	Tfpi2	ENSMUST00000183682	protein_coding		6	-1	3988919	412
ENSMUSG00000022940	protein_coding	Pigp	ENSMUST00000113910	protein_coding		16	-1	94370694	966
ENSMUSG00000031628	protein_coding	Casp3	ENSMUST00000209668	retained_intron		8	1	46617407	1173
ENSMUSG00000015312	protein_coding	Gadd45b	ENSMUST00000220246	protein_coding		10	1	80930161	732
ENSMUSG00000020434	protein_coding	4921536K21Rik	ENSMUST00000020712	protein_coding	principal1	11	-1	3895098	2590
ENSMUSG00000006019	protein_coding	Dhx34	ENSMUST00000163968	protein_coding	principal2	7	-1	16222032	3801
ENSMUSG00000112846	lincRNA	4930432O09Rik	ENSMUST00000219710	lincRNA		10	-1	121202649	1986
ENSMUSG00000090877	protein_coding	Hspa1b	ENSMUST00000172753	protein_coding	principal1	17	-1	34959238	2803
ENSMUSG00000031628	protein_coding	Casp3	ENSMUST00000210534	protein_coding		8	1	46617442	583
ENSMUSG00000015312	protein_coding	Gadd45b	ENSMUST00000219449	retained_intron		10	1	80930812	667
ENSMUSG00000018427	protein_coding	Ypel2	ENSMUST00000018571	protein_coding	principal1	11	-1	86993707	4847
ENSMUSG00000102529	unprocessed_pseudogene	Gm29740	ENSMUST00000193182	unprocessed_pseudogene		Y	-1	23697377	655
ENSMUSG00000112961	processed_pseudogene	Gm48576	ENSMUST00000223433	processed_pseudogene		12	1	19379230	148
ENSMUSG00000018427	protein_coding	Ypel2	ENSMUST00000238921	protein_coding		11	-1	86972024	459
ENSMUSG00000112871	lincRNA	Gm35404	ENSMUST00000219186	lincRNA		10	1	121243002	456
ENSMUSG00000029082	protein_coding	Bst1	ENSMUST00000101237	protein_coding	principal1	5	1	43818891	2856
ENSMUSG00000033427	protein_coding	Upb1	ENSMUST00000039925	protein_coding	principal1	10	1	75406911	3042
ENSMUSG00000106635	TEC	Gm43098	ENSMUST00000199989	TEC		3	-1	57697476	1297
ENSMUSG00000023908	protein_coding	Pkmyt1	ENSMUST00000233238	retained_intron		17	1	23726348	2509
ENSMUSG00000104623	processed_pseudogene	Gm6394	ENSMUST00000197077	processed_pseudogene		3	-1	57718289	477
ENSMUSG00000093908	lincRNA	Gm5784	ENSMUST00000179344	lincRNA		12	1	19387809	2478
ENSMUSG00000092609	protein_coding	Gm20481	ENSMUST00000173680	protein_coding	principal1	17	1	34969912	564
ENSMUSG00000093908	lincRNA	Gm5784	ENSMUST00000220896	lincRNA		12	1	19387864	2016
ENSMUSG00000116705	lincRNA	Gm29737	ENSMUST00000232472	lincRNA		12	1	19408348	393
ENSMUSG00000029082	protein_coding	Bst1	ENSMUST00000118126	retained_intron		5	1	43821502	2054
ENSMUSG00000026890	protein_coding	Lhx6	ENSMUST00000112960	protein_coding	principal4	2	-1	36105271	3345
ENSMUSG00000029082	protein_coding	Bst1	ENSMUST00000125838	retained_intron		5	1	43837114	908
ENSMUSG00000023908	protein_coding	Pkmyt1	ENSMUST00000233954	retained_intron		17	1	23726469	2902
ENSMUSG00000106609	TEC	Gm43181	ENSMUST00000197001	TEC		5	-1	43786117	2072
ENSMUSG00000091971	protein_coding	Hspa1a	ENSMUST00000087328	protein_coding	principal1	17	-1	34972156	2967
ENSMUSG00000104728	TEC	Gm42462	ENSMUST00000196543	TEC		5	-1	43754271	1363
ENSMUSG00000085747	antisense	Slc13a2os	ENSMUST00000149865	antisense		11	1	78394485	3627
ENSMUSG00000026890	protein_coding	Lhx6	ENSMUST00000112967	protein_coding	alternative1	2	-1	36105408	3378
ENSMUSG00000097923	antisense	Gm26577	ENSMUST00000180680	antisense		10	1	21145094	2184
ENSMUSG00000033427	protein_coding	Upb1	ENSMUST00000138058	retained_intron		10	1	75406958	747
ENSMUSG00000104823	TEC	Gm43182	ENSMUST00000199476	TEC		5	1	43782243	2528
ENSMUSG00000023908	protein_coding	Pkmyt1	ENSMUST00000232822	retained_intron		17	1	23726505	2064
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000186672	protein_coding		7	1	127512465	4025
ENSMUSG00000023908	protein_coding	Pkmyt1	ENSMUST00000233812	retained_intron		17	1	23734727	1045
ENSMUSG00000026890	protein_coding	Lhx6	ENSMUST00000136821	protein_coding		2	-1	36094273	825
ENSMUSG00000033427	protein_coding	Upb1	ENSMUST00000132629	retained_intron		10	1	75410043	3724
ENSMUSG00000022940	protein_coding	Pigp	ENSMUST00000113906	protein_coding	principal1	16	-1	94370712	745
ENSMUSG00000033427	protein_coding	Upb1	ENSMUST00000129946	retained_intron		10	1	75428181	520
ENSMUSG00000097767	lincRNA	Miat	ENSMUST00000182953	lincRNA		5	-1	112229395	9163
ENSMUSG00000026167	protein_coding	Wnt10a	ENSMUST00000006718	protein_coding	principal1	1	1	74791516	2468
ENSMUSG00000026890	protein_coding	Lhx6	ENSMUST00000148852	protein_coding		2	-1	36104891	1481
ENSMUSG00000112471	transcribed_processed_pseudogene	Gm5779	ENSMUST00000219564	processed_transcript		10	1	75344472	1477
ENSMUSG00000022940	protein_coding	Pigp	ENSMUST00000113914	protein_coding		16	-1	94371015	912
ENSMUSG00000026167	protein_coding	Wnt10a	ENSMUST00000187238	protein_coding		1	1	74793363	636
ENSMUSG00000112471	transcribed_processed_pseudogene	Gm5779	ENSMUST00000218467	transcribed_processed_pseudogene		10	1	75352055	910
ENSMUSG00000111955	unprocessed_pseudogene	Gm48148	ENSMUST00000220319	unprocessed_pseudogene		10	1	75496061	99
ENSMUSG00000022940	protein_coding	Pigp	ENSMUST00000113905	protein_coding	principal1	16	-1	94371015	758
ENSMUSG00000026890	protein_coding	Lhx6	ENSMUST00000187180	retained_intron		2	-1	36103592	578
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000187164	retained_intron		7	1	127512992	4548
ENSMUSG00000097767	lincRNA	Miat	ENSMUST00000181535	lincRNA		5	-1	112228948	8758
ENSMUSG00000022940	protein_coding	Pigp	ENSMUST00000146924	processed_transcript		16	-1	94365517	499
ENSMUSG00000041058	protein_coding	Wwp1	ENSMUST00000108246	protein_coding	principal1	4	-1	19708993	6440
ENSMUSG00000023909	protein_coding	Paqr4	ENSMUST00000024702	protein_coding	principal1	17	-1	23740398	2575
ENSMUSG00000097767	lincRNA	Miat	ENSMUST00000182258	lincRNA		5	-1	112228644	747
ENSMUSG00000022940	protein_coding	Pigp	ENSMUST00000232294	protein_coding	principal1	16	-1	94371842	548
ENSMUSG00000097767	lincRNA	Miat	ENSMUST00000182509	lincRNA		5	-1	112228929	737
ENSMUSG00000022940	protein_coding	Pigp	ENSMUST00000138514	protein_coding		16	-1	94370509	695
ENSMUSG00000026890	protein_coding	Lhx6	ENSMUST00000137436	processed_transcript		2	-1	36105255	1551
ENSMUSG00000097767	lincRNA	Miat	ENSMUST00000183036	lincRNA		5	-1	112228675	357
ENSMUSG00000023909	protein_coding	Paqr4	ENSMUST00000233776	processed_transcript		17	-1	23740867	422
ENSMUSG00000097767	lincRNA	Miat	ENSMUST00000182699	lincRNA		5	-1	112228641	284
ENSMUSG00000026890	protein_coding	Lhx6	ENSMUST00000112963	protein_coding		2	-1	36105408	3481
ENSMUSG00000107442	TEC	Gm43881	ENSMUST00000203051	TEC		6	1	46413756	2530
ENSMUSG00000108189	TEC	Gm43887	ENSMUST00000204727	TEC		6	1	46076179	3186
ENSMUSG00000041058	protein_coding	Wwp1	ENSMUST00000035982	protein_coding	principal1	4	-1	19678448	4832
ENSMUSG00000107998	processed_pseudogene	Gm44018	ENSMUST00000204471	processed_pseudogene		6	-1	121709049	407
ENSMUSG00000087204	transcribed_processed_pseudogene	1700073E17Rik	ENSMUST00000146858	processed_transcript		6	1	145387596	382
ENSMUSG00000039419	protein_coding	Cntnap2	ENSMUST00000207647	protein_coding		6	1	45059357	674
ENSMUSG00000087204	transcribed_processed_pseudogene	1700073E17Rik	ENSMUST00000152419	processed_transcript		6	1	145387597	1117
ENSMUSG00000087204	transcribed_processed_pseudogene	1700073E17Rik	ENSMUST00000136180	processed_transcript		6	1	145390308	692
ENSMUSG00000087204	transcribed_processed_pseudogene	1700073E17Rik	ENSMUST00000148424	transcribed_processed_pseudogene		6	1	145391426	741
ENSMUSG00000078772	protein_coding	Gm12353	ENSMUST00000108250	protein_coding	principal1	4	1	19605451	554
ENSMUSG00000020925	protein_coding	Ccdc43	ENSMUST00000092569	protein_coding	principal2	11	-1	102697782	2366
ENSMUSG00000086722	antisense	Gm15499	ENSMUST00000141390	antisense		6	1	145441756	422
ENSMUSG00000086483	antisense	8030443G20Rik	ENSMUST00000140919	antisense		4	-1	108972077	903
ENSMUSG00000082699	processed_pseudogene	Gm12736	ENSMUST00000119330	processed_pseudogene		4	-1	108933808	236
ENSMUSG00000006313	protein_coding	Upk1a	ENSMUST00000006476	protein_coding	principal1	7	-1	30612847	1421
ENSMUSG00000021994	protein_coding	Wnt5a	ENSMUST00000063465	protein_coding	principal1	14	1	28504750	7010
ENSMUSG00000021994	protein_coding	Wnt5a	ENSMUST00000134766	processed_transcript		14	1	28505900	337
ENSMUSG00000021994	protein_coding	Wnt5a	ENSMUST00000151929	processed_transcript		14	1	28510618	361
ENSMUSG00000076591	IG_V_gene	Igkv8-16	ENSMUST00000195945	IG_V_gene	principal5	6	-1	70387252	379
ENSMUSG00000076591	IG_V_gene	Igkv8-16	ENSMUST00000103392	IG_V_gene	alternative2	6	-1	70387238	362
ENSMUSG00000037712	protein_coding	Fermt2	ENSMUST00000045905	protein_coding	principal1	14	-1	45530118	3293
ENSMUSG00000021994	protein_coding	Wnt5a	ENSMUST00000134163	processed_transcript		14	1	28511390	2147
ENSMUSG00000106428	IG_V_pseudogene	Gm42667	ENSMUST00000196132	IG_V_pseudogene		6	-1	70405934	234
ENSMUSG00000021994	protein_coding	Wnt5a	ENSMUST00000112272	protein_coding		14	1	28511405	3650
ENSMUSG00000021994	protein_coding	Wnt5a	ENSMUST00000146192	processed_transcript		14	1	28511451	254
ENSMUSG00000037712	protein_coding	Fermt2	ENSMUST00000141424	protein_coding		14	-1	45477861	720
ENSMUSG00000020925	protein_coding	Ccdc43	ENSMUST00000153157	processed_transcript		11	-1	102697734	989
ENSMUSG00000097002	antisense	Gm2670	ENSMUST00000180668	antisense		14	-1	28511392	2804
ENSMUSG00000020925	protein_coding	Ccdc43	ENSMUST00000124869	processed_transcript		11	-1	102697536	407
ENSMUSG00000020925	protein_coding	Ccdc43	ENSMUST00000138147	processed_transcript		11	-1	102697670	875
ENSMUSG00000037712	protein_coding	Fermt2	ENSMUST00000150660	protein_coding		14	-1	45529964	816
ENSMUSG00000022750	protein_coding	Klhl22	ENSMUST00000129199	protein_coding		16	1	17759618	464
ENSMUSG00000037712	protein_coding	Fermt2	ENSMUST00000228208	processed_transcript		14	-1	45518940	331
ENSMUSG00000037712	protein_coding	Fermt2	ENSMUST00000228769	retained_intron		14	-1	45483969	1453
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206155	lincRNA		19	1	8723475	605
ENSMUSG00000037712	protein_coding	Fermt2	ENSMUST00000149723	protein_coding		14	-1	45529786	421
ENSMUSG00000036751	protein_coding	Cox6b1	ENSMUST00000075738	protein_coding	principal1	7	-1	30626151	618
ENSMUSG00000028229	protein_coding	Rmdn1	ENSMUST00000108253	protein_coding	alternative2	4	1	19575162	806
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000205539	retained_intron		19	1	8723487	2348
ENSMUSG00000115275	TEC	9630050E16Rik	ENSMUST00000228572	TEC		14	-1	45492085	7441
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206519	retained_intron		19	1	8723487	2728
ENSMUSG00000117374	processed_pseudogene	Gm49983	ENSMUST00000233991	processed_pseudogene		17	-1	26159004	436
ENSMUSG00000100981	processed_pseudogene	Gm29072	ENSMUST00000191149	processed_pseudogene		1	1	151509224	678
ENSMUSG00000024158	protein_coding	Hagh	ENSMUST00000164251	protein_coding		17	1	24840143	861
ENSMUSG00000022750	protein_coding	Klhl22	ENSMUST00000144116	retained_intron		16	1	17759663	3266
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000205909	lincRNA		19	1	8724005	709
ENSMUSG00000036751	protein_coding	Cox6b1	ENSMUST00000208352	processed_transcript		7	-1	30623483	293
ENSMUSG00000001095	protein_coding	Slc13a2	ENSMUST00000001122	protein_coding	principal1	11	-1	78422217	2412
ENSMUSG00000082339	processed_pseudogene	Gm14028	ENSMUST00000117434	processed_pseudogene		2	-1	128953450	479
ENSMUSG00000020925	protein_coding	Ccdc43	ENSMUST00000164506	protein_coding	alternative2	11	-1	102697734	2316
ENSMUSG00000100551	processed_pseudogene	Gm19503	ENSMUST00000187109	processed_pseudogene		1	-1	151520687	241
ENSMUSG00000037523	protein_coding	Mavs	ENSMUST00000130597	nonsense_mediated_decay		2	1	131234063	2959
ENSMUSG00000036751	protein_coding	Cox6b1	ENSMUST00000208838	protein_coding		7	-1	30626114	354
ENSMUSG00000036751	protein_coding	Cox6b1	ENSMUST00000207851	retained_intron		7	-1	30626114	369
ENSMUSG00000087267	antisense	4933427J07Rik	ENSMUST00000156275	antisense		2	-1	128957861	1533
ENSMUSG00000100357	lincRNA	Gm28181	ENSMUST00000191460	lincRNA		1	-1	151550943	687
ENSMUSG00000067575	processed_pseudogene	Rpl35a-ps3	ENSMUST00000147311	processed_pseudogene		17	-1	29137304	333
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000097593	protein_coding	principal2	18	1	38993145	7898
ENSMUSG00000093446	processed_pseudogene	Gm20694	ENSMUST00000176943	processed_pseudogene		8	1	117125335	404
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000205274	retained_intron		19	1	8724131	854
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206113	retained_intron		19	1	8724140	312
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000137497	protein_coding	alternative1	18	1	38993276	6415
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000205825	lincRNA		19	1	8724147	495
ENSMUSG00000054966	protein_coding	Lmntd1	ENSMUST00000148739	nonsense_mediated_decay		6	-1	145614273	3385
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206135	retained_intron		19	1	8724158	744
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000205389	retained_intron		19	1	8724162	487
ENSMUSG00000028229	protein_coding	Rmdn1	ENSMUST00000029888	protein_coding	principal2	4	1	19575207	1734
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000205576	retained_intron		19	1	8724356	656
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206961	retained_intron		19	1	8724393	560
ENSMUSG00000100256	lincRNA	Gm28851	ENSMUST00000189757	lincRNA		Y	1	45851118	484
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000155576	protein_coding	alternative1	18	1	38993476	2280
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206926	retained_intron		19	1	8724403	600
ENSMUSG00000100256	lincRNA	Gm28851	ENSMUST00000187800	lincRNA		Y	1	45851118	174
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206462	retained_intron		19	1	8724663	855
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000205852	retained_intron		19	1	8724897	510
ENSMUSG00000054966	protein_coding	Lmntd1	ENSMUST00000111706	protein_coding	alternative2	6	-1	145450767	2350
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206383	retained_intron		19	1	8725022	495
ENSMUSG00000061132	protein_coding	Blnk	ENSMUST00000117695	protein_coding		19	-1	40994148	1701
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000123820	processed_transcript		18	1	39099311	775
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206255	retained_intron		19	1	8725104	478
ENSMUSG00000003411	protein_coding	Rab3b	ENSMUST00000106650	protein_coding	principal1	4	1	108879063	3327
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206786	retained_intron		19	1	8725475	729
ENSMUSG00000108414	processed_transcript	Snhg1	ENSMUST00000206029	lincRNA		19	1	8725500	408
ENSMUSG00000003411	protein_coding	Rab3b	ENSMUST00000106651	protein_coding		4	1	108879200	1078
ENSMUSG00000101003	lincRNA	Gm28456	ENSMUST00000190521	lincRNA		Y	1	45874035	622
ENSMUSG00000094001	protein_coding	Vmn1r122	ENSMUST00000164409	protein_coding	principal1	7	-1	21134128	918
ENSMUSG00000039419	protein_coding	Cntnap2	ENSMUST00000114641	protein_coding	principal1	6	1	45060061	9827
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000154551	protein_coding		18	1	39227368	2515
ENSMUSG00000101003	lincRNA	Gm28456	ENSMUST00000185638	lincRNA		Y	1	45874035	437
ENSMUSG00000003411	protein_coding	Rab3b	ENSMUST00000003502	protein_coding	principal1	4	1	108890290	1053
ENSMUSG00000061132	protein_coding	Blnk	ENSMUST00000054769	protein_coding	principal1	19	-1	40994535	2097
ENSMUSG00000100640	unprocessed_pseudogene	Gm29073	ENSMUST00000185563	unprocessed_pseudogene		Y	1	45949660	664
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000111610	protein_coding		14	-1	52104028	2847
ENSMUSG00000003411	protein_coding	Rab3b	ENSMUST00000157062	processed_transcript		4	1	108939100	432
ENSMUSG00000112190	unitary_pseudogene	Gm47209	ENSMUST00000218647	unitary_pseudogene		8	-1	78774545	1458
ENSMUSG00000094385	protein_coding	Vmn1r123	ENSMUST00000166948	protein_coding	principal1	7	1	21162185	924
ENSMUSG00000109768	processed_pseudogene	Gm45446	ENSMUST00000209348	processed_pseudogene		8	-1	78778217	216
ENSMUSG00000039419	protein_coding	Cntnap2	ENSMUST00000196561	processed_transcript		6	1	46170215	622
ENSMUSG00000109269	processed_pseudogene	Gm18054	ENSMUST00000207539	processed_pseudogene		7	1	21182242	555
ENSMUSG00000039419	protein_coding	Cntnap2	ENSMUST00000150737	protein_coding		6	1	47045060	340
ENSMUSG00000061132	protein_coding	Blnk	ENSMUST00000134568	retained_intron		19	-1	40994535	4534
ENSMUSG00000031594	protein_coding	Fgl1	ENSMUST00000034003	protein_coding	principal1	8	-1	41215156	1120
ENSMUSG00000054966	protein_coding	Lmntd1	ENSMUST00000111708	protein_coding	principal2	6	-1	145434925	1559
ENSMUSG00000022750	protein_coding	Klhl22	ENSMUST00000165790	protein_coding	principal1	16	1	17759677	2544
ENSMUSG00000024158	protein_coding	Hagh	ENSMUST00000118788	protein_coding	principal3	17	1	24850490	1191
ENSMUSG00000101436	protein_coding	Gm5157	ENSMUST00000185914	protein_coding	principal1	7	-1	21190423	1581
ENSMUSG00000020186	protein_coding	Csrp2	ENSMUST00000020403	protein_coding	principal1	10	1	110919789	1384
ENSMUSG00000109000	processed_pseudogene	Gm18460	ENSMUST00000208088	processed_pseudogene		7	1	21194597	464
ENSMUSG00000022750	protein_coding	Klhl22	ENSMUST00000129299	protein_coding		16	1	17760314	186
ENSMUSG00000054966	protein_coding	Lmntd1	ENSMUST00000149666	protein_coding		6	-1	145434081	452
ENSMUSG00000024158	protein_coding	Hagh	ENSMUST00000154363	protein_coding		17	1	24850576	388
ENSMUSG00000109253	processed_pseudogene	Gm4536	ENSMUST00000209157	processed_pseudogene		7	1	21229656	542
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000148399	processed_transcript		18	1	39291435	867
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000235817	processed_transcript		18	1	39291435	577
ENSMUSG00000031594	protein_coding	Fgl1	ENSMUST00000134510	retained_intron		8	-1	41215153	3907
ENSMUSG00000022750	protein_coding	Klhl22	ENSMUST00000126600	protein_coding		16	1	17760355	515
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000141058	protein_coding		18	1	39296785	607
ENSMUSG00000022750	protein_coding	Klhl22	ENSMUST00000120488	protein_coding	principal1	16	1	17762791	2596
ENSMUSG00000019982	protein_coding	Myb	ENSMUST00000188495	protein_coding	alternative2	10	-1	21160905	3693
ENSMUSG00000094221	protein_coding	Vmn1r124	ENSMUST00000105200	protein_coding	principal1	7	-1	21260617	924
ENSMUSG00000054966	protein_coding	Lmntd1	ENSMUST00000144829	processed_transcript		6	-1	145614319	643
ENSMUSG00000020186	protein_coding	Csrp2	ENSMUST00000220409	protein_coding		10	1	110920190	780
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000187040	protein_coding	principal2	7	1	127513018	10654
ENSMUSG00000094797	IG_V_gene	Igkv6-15	ENSMUST00000103393	IG_V_gene	principal1	6	-1	70406992	347
ENSMUSG00000022750	protein_coding	Klhl22	ENSMUST00000140306	protein_coding		16	1	17764093	695
ENSMUSG00000024158	protein_coding	Hagh	ENSMUST00000169200	protein_coding		17	1	24850579	725
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000151757	nonsense_mediated_decay		18	1	39296785	529
ENSMUSG00000020186	protein_coding	Csrp2	ENSMUST00000219840	non_stop_decay		10	1	110920193	242
ENSMUSG00000054966	protein_coding	Lmntd1	ENSMUST00000142122	processed_transcript		6	-1	145613969	2189
ENSMUSG00000064147	protein_coding	Rab44	ENSMUST00000233717	protein_coding	alternative2	17	1	29114145	3730
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000186759	retained_intron		7	1	127515993	598
ENSMUSG00000042851	protein_coding	Zc3h6	ENSMUST00000110320	protein_coding	principal1	2	1	128967402	4916
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000190390	protein_coding	alternative2	7	1	127516148	9633
ENSMUSG00000106624	processed_pseudogene	Gm8853	ENSMUST00000198366	processed_pseudogene		6	1	70408631	1344
ENSMUSG00000020186	protein_coding	Csrp2	ENSMUST00000219502	protein_coding		10	1	110920205	544
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000235660	protein_coding		18	1	39306754	524
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000186954	protein_coding	alternative2	7	1	127516148	9345
ENSMUSG00000024158	protein_coding	Hagh	ENSMUST00000130989	protein_coding		17	1	24850667	661
ENSMUSG00000095309	protein_coding	Vmn1r125	ENSMUST00000098739	protein_coding	principal1	7	1	21272179	924
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000189812	retained_intron		7	1	127533760	2033
ENSMUSG00000085445	processed_transcript	Gm16348	ENSMUST00000146654	processed_transcript		8	1	41218139	2385
ENSMUSG00000064147	protein_coding	Rab44	ENSMUST00000132262	processed_transcript		17	1	29114178	347
ENSMUSG00000024158	protein_coding	Hagh	ENSMUST00000149716	protein_coding		17	1	24850748	804
ENSMUSG00000020186	protein_coding	Csrp2	ENSMUST00000219188	protein_coding		10	1	110931201	415
ENSMUSG00000036452	protein_coding	Arhgap26	ENSMUST00000133247	processed_transcript		18	1	39362583	556
ENSMUSG00000085445	processed_transcript	Gm16348	ENSMUST00000142897	processed_transcript		8	1	41218140	974
ENSMUSG00000082287	processed_pseudogene	Gm15333	ENSMUST00000118825	processed_pseudogene		18	-1	39341964	364
ENSMUSG00000042851	protein_coding	Zc3h6	ENSMUST00000110319	protein_coding		2	1	128967409	1484
ENSMUSG00000020186	protein_coding	Csrp2	ENSMUST00000220054	protein_coding		10	1	110931628	736
ENSMUSG00000099488	processed_pseudogene	Gm19774	ENSMUST00000190667	processed_pseudogene		18	1	38714400	114
ENSMUSG00000064147	protein_coding	Rab44	ENSMUST00000141239	protein_coding		17	1	29114181	362
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000098025	protein_coding		7	1	127512027	1257
ENSMUSG00000024158	protein_coding	Hagh	ENSMUST00000163132	processed_transcript		17	1	24858201	649
ENSMUSG00000024158	protein_coding	Hagh	ENSMUST00000024974	protein_coding	alternative1	17	1	24850667	1101
ENSMUSG00000001986	protein_coding	Gria3	ENSMUST00000115103	protein_coding	alternative2	X	1	41401128	3081
ENSMUSG00000096813	protein_coding	Vmn1r126	ENSMUST00000168398	protein_coding	principal1	7	-1	21301467	966
ENSMUSG00000019982	protein_coding	Myb	ENSMUST00000020158	protein_coding	principal3	10	-1	21160984	3074
ENSMUSG00000090248	processed_transcript	Gm14027	ENSMUST00000135186	processed_transcript		2	1	129016952	622
ENSMUSG00000020186	protein_coding	Csrp2	ENSMUST00000220301	processed_transcript		10	1	110934671	720
ENSMUSG00000117994	lincRNA	Gm5820	ENSMUST00000115580	lincRNA		18	1	38892458	2187
ENSMUSG00000039419	protein_coding	Cntnap2	ENSMUST00000199100	protein_coding		6	1	47244387	6279
ENSMUSG00000094811	protein_coding	Gm21103	ENSMUST00000170923	protein_coding	principal5	14	-1	6304785	1761
ENSMUSG00000053877	protein_coding	Srcap	ENSMUST00000066582	protein_coding		7	1	127512992	4545
ENSMUSG00000093890	protein_coding	Vmn1r127	ENSMUST00000105199	protein_coding	principal1	7	-1	21319861	918
ENSMUSG00000117994	lincRNA	Gm5820	ENSMUST00000156167	lincRNA		18	1	38955709	703
ENSMUSG00000094811	protein_coding	Gm21103	ENSMUST00000112737	protein_coding	alternative2	14	-1	6304843	984
ENSMUSG00000015176	protein_coding	Nolc1	ENSMUST00000225780	protein_coding	alternative2	19	1	46075941	2978
ENSMUSG00000094811	protein_coding	Gm21103	ENSMUST00000179042	protein_coding	alternative2	14	-1	6304780	618
ENSMUSG00000015176	protein_coding	Nolc1	ENSMUST00000224434	retained_intron		19	1	46075952	614
ENSMUSG00000039419	protein_coding	Cntnap2	ENSMUST00000060839	protein_coding		6	1	47244453	1540
ENSMUSG00000074807	antisense	Gm10762	ENSMUST00000238197	antisense		2	-1	128968044	2540
ENSMUSG00000117994	lincRNA	Gm5820	ENSMUST00000187912	lincRNA		18	1	38892717	312
ENSMUSG00000101845	antisense	Gm28198	ENSMUST00000190938	antisense		7	-1	127573116	471
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000227242	protein_coding		14	-1	52104005	2617
ENSMUSG00000023140	protein_coding	Reg2	ENSMUST00000203657	protein_coding		6	1	78395623	695
ENSMUSG00000064147	protein_coding	Rab44	ENSMUST00000233860	retained_intron		17	1	29135056	4105
ENSMUSG00000074807	antisense	Gm10762	ENSMUST00000099385	antisense		2	-1	128967725	1133
ENSMUSG00000108008	TEC	Gm43869	ENSMUST00000204742	TEC		6	1	45301103	1405
ENSMUSG00000095758	protein_coding	Vmn1r128	ENSMUST00000169165	protein_coding	principal1	7	1	21349373	924
ENSMUSG00000108146	TEC	Gm43889	ENSMUST00000203950	TEC		6	1	45203810	3681
ENSMUSG00000064147	protein_coding	Rab44	ENSMUST00000139931	protein_coding	alternative2	17	1	29136338	788
ENSMUSG00000019982	protein_coding	Myb	ENSMUST00000186446	retained_intron		10	-1	21160850	2326
ENSMUSG00000026764	protein_coding	Kif5c	ENSMUST00000028102	protein_coding	principal1	2	1	49619298	6856
ENSMUSG00000064147	protein_coding	Rab44	ENSMUST00000233567	retained_intron		17	1	29145719	1197
ENSMUSG00000015176	protein_coding	Nolc1	ENSMUST00000223728	protein_coding	alternative2	19	1	46075970	3523
ENSMUSG00000107779	TEC	Gm43874	ENSMUST00000204853	TEC		6	1	45245637	2798
ENSMUSG00000019982	protein_coding	Myb	ENSMUST00000216985	retained_intron		10	-1	21146761	3233
ENSMUSG00000107571	TEC	Gm43877	ENSMUST00000205029	TEC		6	1	46049158	2238
ENSMUSG00000106715	protein_coding	Tmem265	ENSMUST00000084563	protein_coding	principal1	7	1	127561390	1054
ENSMUSG00000019982	protein_coding	Myb	ENSMUST00000216751	retained_intron		10	-1	21149147	2254
ENSMUSG00000107454	TEC	Gm43875	ENSMUST00000203319	TEC		6	1	46486643	2475
ENSMUSG00000064147	protein_coding	Rab44	ENSMUST00000087942	protein_coding	principal2	17	1	29135056	4105
ENSMUSG00000107886	TEC	Gm43880	ENSMUST00000203635	TEC		6	1	45413235	2162
ENSMUSG00000108217	TEC	Gm43883	ENSMUST00000204002	TEC		6	1	46785953	3750
ENSMUSG00000106715	protein_coding	Tmem265	ENSMUST00000190278	protein_coding		7	1	127561579	587
ENSMUSG00000023140	protein_coding	Reg2	ENSMUST00000023906	protein_coding	principal1	6	1	78405158	698
ENSMUSG00000084375	processed_pseudogene	Gm11637	ENSMUST00000120601	processed_pseudogene		11	-1	102732063	592
ENSMUSG00000019982	protein_coding	Myb	ENSMUST00000214539	processed_transcript		10	-1	21156645	164
ENSMUSG00000108070	TEC	Gm43872	ENSMUST00000203218	TEC		6	1	45135270	2213
ENSMUSG00000026764	protein_coding	Kif5c	ENSMUST00000146247	protein_coding		2	1	49700579	729
ENSMUSG00000107725	processed_pseudogene	Gm18484	ENSMUST00000204389	processed_pseudogene		6	-1	46638282	991
ENSMUSG00000097006	antisense	9530082P21Rik	ENSMUST00000181291	antisense		17	1	23743234	1798
ENSMUSG00000086162	unitary_pseudogene	Gm16342	ENSMUST00000124025	unitary_pseudogene		11	1	102732405	1025
ENSMUSG00000116775	lincRNA	Gm49769	ENSMUST00000231385	lincRNA		12	1	19434529	633
ENSMUSG00000107414	TEC	6330419E04Rik	ENSMUST00000203087	TEC		6	1	45306124	1263
ENSMUSG00000006311	protein_coding	Etv2	ENSMUST00000108147	protein_coding	principal1	7	-1	30635852	1048
ENSMUSG00000001986	protein_coding	Gria3	ENSMUST00000076349	protein_coding	principal3	X	1	41401304	5192
ENSMUSG00000107952	processed_pseudogene	Gm6352	ENSMUST00000203583	processed_pseudogene		6	1	47045156	1134
ENSMUSG00000097006	antisense	9530082P21Rik	ENSMUST00000181605	antisense		17	1	23749236	3162
ENSMUSG00000097006	antisense	9530082P21Rik	ENSMUST00000180547	antisense		17	1	23749337	1709
ENSMUSG00000026764	protein_coding	Kif5c	ENSMUST00000138834	processed_transcript		2	1	49722567	775
ENSMUSG00000079575	processed_pseudogene	Rbpj-ps3	ENSMUST00000182751	processed_pseudogene		6	-1	46530794	1441
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000228198	protein_coding	principal5	14	-1	52103999	2498
ENSMUSG00000059229	transcribed_processed_pseudogene	Gm6802	ENSMUST00000167843	processed_transcript		12	1	19490308	1983
ENSMUSG00000107913	TEC	Gm43871	ENSMUST00000204931	TEC		6	1	46041951	1955
ENSMUSG00000059229	transcribed_processed_pseudogene	Gm6802	ENSMUST00000186566	transcribed_processed_pseudogene		12	1	19490532	126
ENSMUSG00000115692	antisense	Gm49163	ENSMUST00000228934	antisense		17	1	23765261	705
ENSMUSG00000026764	protein_coding	Kif5c	ENSMUST00000152353	processed_transcript		2	1	49732611	383
ENSMUSG00000107643	TEC	Gm43885	ENSMUST00000204928	TEC		6	1	45194876	2542
ENSMUSG00000085174	antisense	Gm16206	ENSMUST00000132485	antisense		3	1	53452619	1966
ENSMUSG00000110413	processed_pseudogene	Gm45409	ENSMUST00000211486	processed_pseudogene		7	1	16228900	252
ENSMUSG00000107515	TEC	Gm43886	ENSMUST00000205039	TEC		6	1	45901938	2386
ENSMUSG00000072477	IG_V_pseudogene	Gm10360	ENSMUST00000097219	IG_V_pseudogene		6	1	70424162	272
ENSMUSG00000097447	processed_transcript	Gm26630	ENSMUST00000181015	processed_transcript		14	1	6352044	671
ENSMUSG00000031683	protein_coding	Lsm6	ENSMUST00000130325	protein_coding	principal1	8	-1	78821140	3792
ENSMUSG00000107712	TEC	Gm43870	ENSMUST00000205102	TEC		6	1	46134102	4369
ENSMUSG00000026764	protein_coding	Kif5c	ENSMUST00000127245	processed_transcript		2	1	49744525	367
ENSMUSG00000105687	processed_pseudogene	Gm6157	ENSMUST00000199935	processed_pseudogene		6	-1	70430825	1897
ENSMUSG00000097447	processed_transcript	Gm26630	ENSMUST00000180462	processed_transcript		14	1	6352057	1293
ENSMUSG00000001986	protein_coding	Gria3	ENSMUST00000156721	retained_intron		X	1	41401398	3645
ENSMUSG00000108123	TEC	Gm43884	ENSMUST00000204251	TEC		6	1	45329238	559
ENSMUSG00000026764	protein_coding	Kif5c	ENSMUST00000132968	processed_transcript		2	1	49752190	480
ENSMUSG00000006642	protein_coding	Tcf23	ENSMUST00000006818	protein_coding	principal1	5	1	30968662	4116
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000228748	protein_coding	alternative2	14	-1	52104007	1691
ENSMUSG00000107433	TEC	Gm43882	ENSMUST00000204871	TEC		6	1	45326402	2264
ENSMUSG00000001986	protein_coding	Gria3	ENSMUST00000139965	nonsense_mediated_decay		X	1	41401436	5172
ENSMUSG00000082879	processed_pseudogene	Gm13525	ENSMUST00000120607	processed_pseudogene		2	1	49680499	478
ENSMUSG00000107729	TEC	B230112I24Rik	ENSMUST00000203953	TEC		6	1	45073566	1229
ENSMUSG00000097447	processed_transcript	Gm26630	ENSMUST00000181759	processed_transcript		14	1	6352064	2078
ENSMUSG00000113133	processed_pseudogene	Gm21039	ENSMUST00000223359	processed_pseudogene		12	-1	88282770	2012
ENSMUSG00000001986	protein_coding	Gria3	ENSMUST00000148212	retained_intron		X	1	41401482	5206
ENSMUSG00000107782	TEC	Gm43888	ENSMUST00000204405	TEC		6	1	46072409	2587
ENSMUSG00000097447	processed_transcript	Gm26630	ENSMUST00000181116	processed_transcript		14	1	6352064	678
ENSMUSG00000091776	processed_pseudogene	Gm8340	ENSMUST00000165508	processed_pseudogene		14	1	6358497	1191
ENSMUSG00000031683	protein_coding	Lsm6	ENSMUST00000051867	protein_coding	principal1	8	-1	78821140	2107
ENSMUSG00000107606	TEC	Gm43873	ENSMUST00000204505	TEC		6	1	46045143	3938
ENSMUSG00000001986	protein_coding	Gria3	ENSMUST00000124169	protein_coding		X	1	41402740	322
ENSMUSG00000094879	protein_coding	Vmn1r129	ENSMUST00000165961	protein_coding	principal1	7	-1	21361291	924
ENSMUSG00000097129	bidirectional_promoter_lncRNA	4930507D05Rik	ENSMUST00000238598	bidirectional_promoter_lncRNA		10	1	62449489	1865
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000227458	protein_coding	alternative1	14	-1	52104003	1683
ENSMUSG00000108055	TEC	Gm43876	ENSMUST00000203831	TEC		6	1	45529083	3229
ENSMUSG00000097129	bidirectional_promoter_lncRNA	4930507D05Rik	ENSMUST00000181110	bidirectional_promoter_lncRNA		10	1	62449489	1834
ENSMUSG00000094635	processed_pseudogene	Gm7104	ENSMUST00000179741	processed_pseudogene		12	-1	88287069	2532
ENSMUSG00000107858	TEC	Gm43879	ENSMUST00000203811	TEC		6	1	45080746	3760
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000227536	protein_coding		14	-1	52103969	1301
ENSMUSG00000095185	unprocessed_pseudogene	Vmn1r-ps75	ENSMUST00000174316	unprocessed_pseudogene		7	-1	21393260	920
ENSMUSG00000107532	processed_pseudogene	Gm35931	ENSMUST00000203931	processed_pseudogene		6	-1	46778856	448
ENSMUSG00000031683	protein_coding	Lsm6	ENSMUST00000126174	retained_intron		8	-1	78810210	473
ENSMUSG00000001986	protein_coding	Gria3	ENSMUST00000126843	retained_intron		X	1	41610197	560
ENSMUSG00000109259	processed_pseudogene	Gm18055	ENSMUST00000208254	processed_pseudogene		7	1	21424547	547
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000228232	protein_coding	alternative2	14	-1	52104004	2535
ENSMUSG00000031683	protein_coding	Lsm6	ENSMUST00000146824	protein_coding	principal1	8	-1	78813214	541
ENSMUSG00000001986	protein_coding	Gria3	ENSMUST00000165288	protein_coding	alternative2	X	1	41401565	2667
ENSMUSG00000082725	unprocessed_pseudogene	Gm12451	ENSMUST00000121636	unprocessed_pseudogene		4	1	49396112	633
ENSMUSG00000109516	protein_coding	Gm6882	ENSMUST00000207192	protein_coding	principal1	7	-1	21432745	2365
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000227195	protein_coding		14	-1	52103990	745
ENSMUSG00000109516	protein_coding	Gm6882	ENSMUST00000177741	protein_coding	principal1	7	-1	21427941	942
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000228045	retained_intron		14	-1	52103999	660
ENSMUSG00000109380	processed_pseudogene	Gm18461	ENSMUST00000208421	processed_pseudogene		7	1	21436852	420
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000226993	protein_coding		14	-1	52097619	582
ENSMUSG00000015176	protein_coding	Nolc1	ENSMUST00000235620	protein_coding	principal2	19	1	46075989	2441
ENSMUSG00000108907	unprocessed_pseudogene	Gm4541	ENSMUST00000208901	unprocessed_pseudogene		7	1	21453328	1848
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000228815	protein_coding		14	-1	52103993	755
ENSMUSG00000040680	protein_coding	Kremen2	ENSMUST00000046525	protein_coding	principal1	17	-1	23745833	2123
ENSMUSG00000095360	protein_coding	Gm3594	ENSMUST00000171784	protein_coding	principal5	14	-1	6444553	1759
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000228786	retained_intron		14	-1	52103999	611
ENSMUSG00000095360	protein_coding	Gm3594	ENSMUST00000169152	protein_coding	alternative2	14	-1	6444611	997
ENSMUSG00000026339	protein_coding	Ccdc93	ENSMUST00000036025	protein_coding	principal4	1	1	121431049	7274
ENSMUSG00000040605	protein_coding	Bace2	ENSMUST00000047275	protein_coding	principal1	16	1	97356742	7646
ENSMUSG00000095360	protein_coding	Gm3594	ENSMUST00000179747	protein_coding	alternative2	14	-1	6444548	618
ENSMUSG00000015176	protein_coding	Nolc1	ENSMUST00000225758	retained_intron		19	1	46076013	1854
ENSMUSG00000015176	protein_coding	Nolc1	ENSMUST00000223683	protein_coding		19	1	46076032	2398
ENSMUSG00000108022	protein_coding	Gm7298	ENSMUST00000204124	protein_coding	principal1	6	1	121732932	4657
ENSMUSG00000060373	protein_coding	Hnrnpc	ENSMUST00000164655	protein_coding		14	-1	52104028	2843
ENSMUSG00000096904	protein_coding	Lamtor3-ps	ENSMUST00000164408	protein_coding	principal5	14	-1	6412482	1745
ENSMUSG00000015176	protein_coding	Nolc1	ENSMUST00000224490	nonsense_mediated_decay		19	1	46076054	516
ENSMUSG00000083754	processed_pseudogene	Gm7803	ENSMUST00000117176	processed_pseudogene		X	-1	50326532	1015
ENSMUSG00000040605	protein_coding	Bace2	ENSMUST00000231664	nonsense_mediated_decay		16	1	97408275	806
ENSMUSG00000096904	protein_coding	Lamtor3-ps	ENSMUST00000179312	protein_coding	alternative2	14	-1	6411578	396
ENSMUSG00000082660	processed_pseudogene	Gm14612	ENSMUST00000121522	processed_pseudogene		X	1	50373144	881
ENSMUSG00000040605	protein_coding	Bace2	ENSMUST00000231783	retained_intron		16	1	97411895	746
ENSMUSG00000096828	transcribed_unprocessed_pseudogene	Gm3618	ENSMUST00000238283	processed_transcript		14	-1	6352062	693
ENSMUSG00000042997	protein_coding	Nhlrc3	ENSMUST00000056749	protein_coding	principal1	3	-1	53463332	5047
ENSMUSG00000040605	protein_coding	Bace2	ENSMUST00000231892	protein_coding		16	1	97415078	271
ENSMUSG00000116686	processed_pseudogene	Gm49681	ENSMUST00000232315	processed_pseudogene		16	1	97405269	363
ENSMUSG00000060317	protein_coding	Acnat2	ENSMUST00000081541	protein_coding	principal2	4	-1	49408151	1664
ENSMUSG00000026339	protein_coding	Ccdc93	ENSMUST00000156459	retained_intron		1	1	121431075	1438
ENSMUSG00000042320	protein_coding	Prox2	ENSMUST00000177289	protein_coding	principal1	12	-1	85097081	3066
ENSMUSG00000096828	transcribed_unprocessed_pseudogene	Gm3618	ENSMUST00000238394	processed_transcript		14	-1	6351993	1708
ENSMUSG00000096828	transcribed_unprocessed_pseudogene	Gm3618	ENSMUST00000112726	transcribed_unprocessed_pseudogene		14	-1	6343678	192
ENSMUSG00000015176	protein_coding	Nolc1	ENSMUST00000165017	protein_coding	principal2	19	1	46075863	3634
ENSMUSG00000048173	protein_coding	Olfr1324	ENSMUST00000215270	protein_coding	alternative2	X	-1	50428498	5679
ENSMUSG00000026339	protein_coding	Ccdc93	ENSMUST00000155673	processed_transcript		1	1	121431095	1036
ENSMUSG00000019179	protein_coding	Mdh2	ENSMUST00000019323	protein_coding	principal1	5	1	135778480	1456
ENSMUSG00000060317	protein_coding	Acnat2	ENSMUST00000107698	protein_coding	alternative2	4	-1	49383576	1428
ENSMUSG00000062861	protein_coding	Zfp28	ENSMUST00000081022	protein_coding	principal1	7	1	6383295	4447
ENSMUSG00000026339	protein_coding	Ccdc93	ENSMUST00000128924	processed_transcript		1	1	121431108	762
ENSMUSG00000042997	protein_coding	Nhlrc3	ENSMUST00000130348	nonsense_mediated_decay		3	-1	53463323	4885
ENSMUSG00000048173	protein_coding	Olfr1324	ENSMUST00000050044	protein_coding	alternative2	X	-1	50426582	1152
ENSMUSG00000040136	protein_coding	Abcc8	ENSMUST00000210655	protein_coding		7	-1	46136629	2832
ENSMUSG00000108991	TEC	Gm45807	ENSMUST00000209142	TEC		7	1	82695399	2874
ENSMUSG00000001383	protein_coding	Zmat2	ENSMUST00000001419	protein_coding	principal1	18	1	36793876	2310
ENSMUSG00000060317	protein_coding	Acnat2	ENSMUST00000125123	protein_coding		4	-1	49405758	706
ENSMUSG00000048173	protein_coding	Olfr1324	ENSMUST00000219631	protein_coding	principal2	X	-1	50426582	1152
ENSMUSG00000019179	protein_coding	Mdh2	ENSMUST00000197909	retained_intron		5	1	135778636	1606
ENSMUSG00000108984	TEC	Gm44916	ENSMUST00000208664	TEC		7	1	82715592	2194
ENSMUSG00000096828	transcribed_unprocessed_pseudogene	Gm3618	ENSMUST00000238435	processed_transcript		14	-1	6352021	715
ENSMUSG00000060317	protein_coding	Acnat2	ENSMUST00000139564	processed_transcript		4	-1	49405743	556
ENSMUSG00000042997	protein_coding	Nhlrc3	ENSMUST00000129497	retained_intron		3	-1	53461983	668
ENSMUSG00000042320	protein_coding	Prox2	ENSMUST00000110249	protein_coding	principal1	12	-1	85106431	2682
ENSMUSG00000083112	processed_pseudogene	Gm14620	ENSMUST00000120656	processed_pseudogene		X	-1	50542784	383
ENSMUSG00000040136	protein_coding	Abcc8	ENSMUST00000209432	protein_coding		7	-1	46105833	431
ENSMUSG00000042997	protein_coding	Nhlrc3	ENSMUST00000198983	retained_intron		3	-1	53463251	4377
ENSMUSG00000019179	protein_coding	Mdh2	ENSMUST00000138101	nonsense_mediated_decay		5	1	135778662	1112
ENSMUSG00000086690	antisense	4933406J10Rik	ENSMUST00000144828	antisense		7	-1	82755644	963
ENSMUSG00000042320	protein_coding	Prox2	ENSMUST00000191324	retained_intron		12	-1	85095615	1593
ENSMUSG00000040136	protein_coding	Abcc8	ENSMUST00000210770	protein_coding		7	-1	46106683	466
ENSMUSG00000042997	protein_coding	Nhlrc3	ENSMUST00000153342	retained_intron		3	-1	53463297	640
ENSMUSG00000108855	processed_pseudogene	Gm44917	ENSMUST00000208798	processed_pseudogene		7	1	82677546	520
ENSMUSG00000001383	protein_coding	Zmat2	ENSMUST00000235399	retained_intron		18	1	36795755	707
ENSMUSG00000072738	protein_coding	Gm16440	ENSMUST00000100900	protein_coding	principal1	14	-1	6390319	1089
ENSMUSG00000062861	protein_coding	Zfp28	ENSMUST00000207086	nonsense_mediated_decay		7	1	6383531	776
ENSMUSG00000019179	protein_coding	Mdh2	ENSMUST00000130795	retained_intron		5	1	135778677	725
ENSMUSG00000042320	protein_coding	Prox2	ENSMUST00000221003	processed_transcript		12	-1	85110759	728
ENSMUSG00000094208	protein_coding	Vmn1r130	ENSMUST00000177936	protein_coding	principal1	7	1	21511780	924
ENSMUSG00000026339	protein_coding	Ccdc93	ENSMUST00000112621	protein_coding	alternative1	1	1	121431110	2338
ENSMUSG00000019179	protein_coding	Mdh2	ENSMUST00000200556	protein_coding		5	1	135778685	648
ENSMUSG00000093629	antisense	Prox2os	ENSMUST00000177043	antisense		12	1	85086374	1133
ENSMUSG00000062861	protein_coding	Zfp28	ENSMUST00000208949	nonsense_mediated_decay		7	1	6383589	1071
ENSMUSG00000102935	TEC	Gm38355	ENSMUST00000192514	TEC		12	-1	85102347	1570
ENSMUSG00000019179	protein_coding	Mdh2	ENSMUST00000196285	protein_coding		5	1	135778689	506
ENSMUSG00000062861	protein_coding	Zfp28	ENSMUST00000207465	protein_coding		7	1	6389536	694
ENSMUSG00000063514	processed_pseudogene	Gm6756	ENSMUST00000180647	processed_pseudogene		18	1	36920396	1620
ENSMUSG00000026339	protein_coding	Ccdc93	ENSMUST00000152959	retained_intron		1	1	121491217	3040
ENSMUSG00000019179	protein_coding	Mdh2	ENSMUST00000143747	retained_intron		5	1	135778722	528
ENSMUSG00000040097	protein_coding	Flywch1	ENSMUST00000227120	protein_coding		17	-1	23763089	2943
ENSMUSG00000096741	unprocessed_pseudogene	Vmn1r-ps76	ENSMUST00000179492	unprocessed_pseudogene		7	-1	21524200	924
ENSMUSG00000062861	protein_coding	Zfp28	ENSMUST00000208338	protein_coding		7	1	6389754	715
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000040647	protein_coding	principal1	18	-1	38918771	3981
ENSMUSG00000040136	protein_coding	Abcc8	ENSMUST00000210637	retained_intron		7	-1	46116050	4005
ENSMUSG00000028953	protein_coding	Abcf2	ENSMUST00000030795	protein_coding	principal1	5	-1	24577467	2569
ENSMUSG00000040097	protein_coding	Flywch1	ENSMUST00000227733	retained_intron		17	-1	23756921	729
ENSMUSG00000037523	protein_coding	Mavs	ENSMUST00000041362	protein_coding	principal1	2	1	131234067	2867
ENSMUSG00000062861	protein_coding	Zfp28	ENSMUST00000207809	protein_coding		7	1	6390457	519
ENSMUSG00000093941	protein_coding	Vmn1r131	ENSMUST00000179390	protein_coding	principal1	7	-1	21546090	921
ENSMUSG00000069986	processed_pseudogene	Gm8054	ENSMUST00000093411	processed_pseudogene		8	-1	78869868	483
ENSMUSG00000100628	lincRNA	Gm29648	ENSMUST00000188651	lincRNA		Y	-1	46348681	650
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000131348	nonsense_mediated_decay		18	-1	38929404	3983
ENSMUSG00000114140	unprocessed_pseudogene	Gm6943	ENSMUST00000222009	unprocessed_pseudogene		12	1	19525993	580
ENSMUSG00000040097	protein_coding	Flywch1	ENSMUST00000045517	protein_coding	principal1	17	-1	23763775	2798
ENSMUSG00000113300	lincRNA	Gm49371	ENSMUST00000222861	lincRNA		12	1	19560110	1464
ENSMUSG00000100989	unprocessed_pseudogene	Gm29647	ENSMUST00000188795	unprocessed_pseudogene		Y	1	46482580	666
ENSMUSG00000114158	processed_pseudogene	Gm49372	ENSMUST00000221242	processed_pseudogene		12	1	19554079	470
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000115582	protein_coding	principal1	18	-1	38866747	2449
ENSMUSG00000100003	lincRNA	Gm29646	ENSMUST00000191146	lincRNA		Y	1	46574765	1493
ENSMUSG00000037523	protein_coding	Mavs	ENSMUST00000110199	protein_coding	principal1	2	1	131234105	3057
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000236630	protein_coding	principal1	18	-1	38867003	699
ENSMUSG00000028996	protein_coding	Rbp7	ENSMUST00000148596	nonsense_mediated_decay		4	-1	149453424	507
ENSMUSG00000031845	protein_coding	Bco1	ENSMUST00000034308	protein_coding	principal3	8	1	117095854	2338
ENSMUSG00000074361	protein_coding	C5ar2	ENSMUST00000238927	protein_coding	alternative2	7	-1	16242331	3429
ENSMUSG00000100003	lincRNA	Gm29646	ENSMUST00000190248	lincRNA		Y	1	46575218	431
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000117566	protein_coding		18	-1	38858748	418
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000236060	protein_coding		18	-1	38866747	974
ENSMUSG00000074361	protein_coding	C5ar2	ENSMUST00000171425	protein_coding	alternative2	7	-1	16244154	3381
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000237356	protein_coding		18	-1	38867003	946
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000235922	protein_coding		18	-1	38929472	1144
ENSMUSG00000037523	protein_coding	Mavs	ENSMUST00000132694	processed_transcript		2	1	131241934	887
ENSMUSG00000031845	protein_coding	Bco1	ENSMUST00000176860	protein_coding	alternative2	8	1	117095998	1995
ENSMUSG00000099462	lincRNA	Gm28549	ENSMUST00000191354	lincRNA		Y	1	46603660	1497
ENSMUSG00000040097	protein_coding	Flywch1	ENSMUST00000086325	protein_coding	principal1	17	-1	23771522	2443
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000139972	protein_coding		18	-1	38866132	346
ENSMUSG00000034226	protein_coding	Rhov	ENSMUST00000037360	protein_coding	principal1	2	-1	119271272	1703
ENSMUSG00000074361	protein_coding	C5ar2	ENSMUST00000238893	protein_coding	alternative2	7	-1	16244154	3522
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000147607	retained_intron		18	-1	38858861	342
ENSMUSG00000099462	lincRNA	Gm28549	ENSMUST00000187473	lincRNA		Y	1	46604113	436
ENSMUSG00000031845	protein_coding	Bco1	ENSMUST00000167370	protein_coding	alternative2	8	1	117095865	1747
ENSMUSG00000040097	protein_coding	Flywch1	ENSMUST00000226460	protein_coding		17	-1	23771602	665
ENSMUSG00000073415	antisense	Gm10501	ENSMUST00000151136	antisense		17	-1	34981788	2200
ENSMUSG00000074361	protein_coding	C5ar2	ENSMUST00000098792	protein_coding	principal5	7	-1	16242331	3429
ENSMUSG00000036585	protein_coding	Fgf1	ENSMUST00000134864	protein_coding		18	-1	38929157	384
ENSMUSG00000081773	processed_pseudogene	Gm8302	ENSMUST00000119217	processed_pseudogene		18	-1	38772347	852
ENSMUSG00000116643	transcribed_unprocessed_pseudogene	Gm30162	ENSMUST00000232244	processed_transcript		16	1	75646211	698
ENSMUSG00000116643	transcribed_unprocessed_pseudogene	Gm30162	ENSMUST00000232208	processed_transcript		16	1	75646211	978
ENSMUSG00000116643	transcribed_unprocessed_pseudogene	Gm30162	ENSMUST00000239086	transcribed_unprocessed_pseudogene		16	1	75675063	827
ENSMUSG00000032705	protein_coding	Exd2	ENSMUST00000038185	protein_coding	principal1	12	1	80463095	3310
ENSMUSG00000052850	protein_coding	Tas2r137	ENSMUST00000064932	protein_coding	principal1	6	1	40491233	1073
ENSMUSG00000116643	transcribed_unprocessed_pseudogene	Gm30162	ENSMUST00000231519	processed_transcript		16	1	75678077	351
ENSMUSG00000084015	unprocessed_pseudogene	Gm14175	ENSMUST00000119835	unprocessed_pseudogene		2	1	119284792	241
ENSMUSG00000081905	processed_pseudogene	Gm11370	ENSMUST00000120583	processed_pseudogene		13	1	30731777	260
ENSMUSG00000028996	protein_coding	Rbp7	ENSMUST00000030848	protein_coding	principal1	4	-1	149454978	619
ENSMUSG00000046096	protein_coding	Mosmo	ENSMUST00000207065	nonsense_mediated_decay		7	1	120677618	812
ENSMUSG00000032705	protein_coding	Exd2	ENSMUST00000219272	protein_coding		12	1	80463220	441
ENSMUSG00000007033	protein_coding	Hspa1l	ENSMUST00000007248	protein_coding	principal1	17	1	34972703	2472
ENSMUSG00000028996	protein_coding	Rbp7	ENSMUST00000132103	processed_transcript		4	-1	149454970	416
ENSMUSG00000032705	protein_coding	Exd2	ENSMUST00000219477	processed_transcript		12	1	80476080	951
ENSMUSG00000037140	protein_coding	Tas2r108	ENSMUST00000038750	protein_coding	principal1	6	1	40493529	1013
ENSMUSG00000046096	protein_coding	Mosmo	ENSMUST00000208454	protein_coding		7	1	120677620	813
ENSMUSG00000082711	processed_pseudogene	Gm12987	ENSMUST00000118562	processed_pseudogene		4	-1	136584660	489
ENSMUSG00000032705	protein_coding	Exd2	ENSMUST00000219039	nonsense_mediated_decay		12	1	80484337	787
ENSMUSG00000091003	processed_pseudogene	Gm7244	ENSMUST00000164658	processed_pseudogene		9	1	31274821	455
ENSMUSG00000032705	protein_coding	Exd2	ENSMUST00000218565	retained_intron		12	1	80489555	777
ENSMUSG00000032705	protein_coding	Exd2	ENSMUST00000220239	retained_intron		12	1	80490890	801
ENSMUSG00000111361	TEC	Gm47445	ENSMUST00000213617	TEC		10	-1	34179928	1694
ENSMUSG00000032705	protein_coding	Exd2	ENSMUST00000219757	retained_intron		12	1	80491101	5245
ENSMUSG00000048707	protein_coding	Tprn	ENSMUST00000114336	protein_coding	principal1	2	1	25262618	2787
ENSMUSG00000026278	protein_coding	Bok	ENSMUST00000027499	protein_coding	principal1	1	1	93685660	1468
ENSMUSG00000040136	protein_coding	Abcc8	ENSMUST00000033123	protein_coding	principal1	7	-1	46180017	4877
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000133454	nonsense_mediated_decay		16	1	14361558	4845
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000076810	protein_coding	principal1	16	-1	34456917	8940
ENSMUSG00000046096	protein_coding	Mosmo	ENSMUST00000060175	protein_coding	principal1	7	1	120677631	4831
ENSMUSG00000048707	protein_coding	Tprn	ENSMUST00000137361	processed_transcript		2	1	25264241	441
ENSMUSG00000026278	protein_coding	Bok	ENSMUST00000201863	protein_coding	principal1	1	1	93685702	883
ENSMUSG00000040136	protein_coding	Abcc8	ENSMUST00000210110	protein_coding		7	-1	46137968	630
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000147759	nonsense_mediated_decay		16	1	14361558	4972
ENSMUSG00000048707	protein_coding	Tprn	ENSMUST00000141509	processed_transcript		2	1	25267564	311
ENSMUSG00000026278	protein_coding	Bok	ENSMUST00000188394	protein_coding		1	1	93686263	547
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000231657	processed_transcript		16	-1	34016494	686
ENSMUSG00000046096	protein_coding	Mosmo	ENSMUST00000208627	processed_transcript		7	1	120677680	345
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000114963	protein_coding		16	-1	34163279	3207
ENSMUSG00000038563	protein_coding	Efl1	ENSMUST00000141726	protein_coding		7	1	82648614	755
ENSMUSG00000046096	protein_coding	Mosmo	ENSMUST00000208319	retained_intron		7	1	120713329	680
ENSMUSG00000048707	protein_coding	Tprn	ENSMUST00000155738	processed_transcript		2	1	25268936	464
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000130671	nonsense_mediated_decay		16	1	14361558	4945
ENSMUSG00000108879	processed_pseudogene	Gm18056	ENSMUST00000207670	processed_pseudogene		7	1	21565325	568
ENSMUSG00000046096	protein_coding	Mosmo	ENSMUST00000207646	processed_transcript		7	1	120717452	385
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000114966	protein_coding		16	-1	34097090	3857
ENSMUSG00000026278	protein_coding	Bok	ENSMUST00000200888	protein_coding		1	1	93689208	740
ENSMUSG00000101076	unprocessed_pseudogene	Gm4545	ENSMUST00000190797	unprocessed_pseudogene		7	-1	21568697	603
ENSMUSG00000052557	protein_coding	Gan	ENSMUST00000162997	protein_coding		8	1	117158137	13461
ENSMUSG00000109300	processed_pseudogene	Gm18462	ENSMUST00000208112	processed_pseudogene		7	1	21577652	417
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000142817	protein_coding		16	-1	34392109	7636
ENSMUSG00000026278	protein_coding	Bok	ENSMUST00000185685	processed_transcript		1	1	93693817	735
ENSMUSG00000046096	protein_coding	Mosmo	ENSMUST00000208873	protein_coding		7	1	120726176	2064
ENSMUSG00000071550	protein_coding	Cfap44	ENSMUST00000147988	non_stop_decay		16	1	44394796	593
ENSMUSG00000040136	protein_coding	Abcc8	ENSMUST00000210986	retained_intron		7	-1	46180033	1845
ENSMUSG00000112421	antisense	4933406B15Rik	ENSMUST00000220065	antisense		12	-1	80597140	1182
ENSMUSG00000046096	protein_coding	Mosmo	ENSMUST00000208534	retained_intron		7	1	120728324	3158
ENSMUSG00000052557	protein_coding	Gan	ENSMUST00000064488	protein_coding	principal1	8	1	117158135	2652
ENSMUSG00000071550	protein_coding	Cfap44	ENSMUST00000136514	retained_intron		16	1	44394822	601
ENSMUSG00000040136	protein_coding	Abcc8	ENSMUST00000210511	nonsense_mediated_decay		7	-1	46179986	637
ENSMUSG00000020079	protein_coding	Supv3l1	ENSMUST00000020273	protein_coding	principal1	10	-1	62449738	2604
ENSMUSG00000074322	protein_coding	Vmn1r132	ENSMUST00000098736	protein_coding	principal1	7	1	21614092	894
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000232157	protein_coding		16	-1	34096028	2690
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000114964	protein_coding		16	-1	34096028	2693
ENSMUSG00000038563	protein_coding	Efl1	ENSMUST00000125245	retained_intron		7	1	82648629	2453
ENSMUSG00000027420	protein_coding	Bfsp1	ENSMUST00000028907	protein_coding	principal3	2	-1	143863173	2372
ENSMUSG00000110146	TEC	Gm45487	ENSMUST00000211039	TEC		7	-1	46112081	545
ENSMUSG00000028435	protein_coding	Aqp3	ENSMUST00000055327	protein_coding	principal1	4	-1	41098183	1765
ENSMUSG00000018012	protein_coding	Rac3	ENSMUST00000018156	protein_coding	principal1	11	1	120721470	1076
ENSMUSG00000101280	unprocessed_pseudogene	Gm8600	ENSMUST00000186320	unprocessed_pseudogene		7	-1	21676420	905
ENSMUSG00000111646	lincRNA	Gm40621	ENSMUST00000215353	lincRNA		10	1	29366740	703
ENSMUSG00000111646	lincRNA	Gm40621	ENSMUST00000217378	lincRNA		10	1	29366740	1470
ENSMUSG00000028435	protein_coding	Aqp3	ENSMUST00000154722	retained_intron		4	-1	41094448	401
ENSMUSG00000018012	protein_coding	Rac3	ENSMUST00000142229	protein_coding		11	1	120721573	589
ENSMUSG00000110240	antisense	Gm45486	ENSMUST00000211767	antisense		7	1	46123352	1109
ENSMUSG00000001552	protein_coding	Jup	ENSMUST00000124659	processed_transcript		11	-1	100372716	2913
ENSMUSG00000027420	protein_coding	Bfsp1	ENSMUST00000099296	protein_coding	alternative2	2	-1	143862943	2160
ENSMUSG00000100135	lincRNA	Gm28643	ENSMUST00000188811	lincRNA		2	1	45156925	356
ENSMUSG00000081830	processed_pseudogene	Gm13475	ENSMUST00000119290	processed_pseudogene		2	1	45329232	234
ENSMUSG00000082987	processed_pseudogene	Rps13-ps6	ENSMUST00000120038	processed_pseudogene		2	1	143855649	428
ENSMUSG00000042496	protein_coding	Prdm10	ENSMUST00000117389	protein_coding		9	1	31280538	1952
ENSMUSG00000113114	unitary_pseudogene	Gm47846	ENSMUST00000223151	unitary_pseudogene		11	1	120059101	183
ENSMUSG00000020079	protein_coding	Supv3l1	ENSMUST00000162023	nonsense_mediated_decay		10	-1	62449683	2519
ENSMUSG00000018012	protein_coding	Rac3	ENSMUST00000134322	processed_transcript		11	1	120722014	717
ENSMUSG00000020079	protein_coding	Supv3l1	ENSMUST00000161830	retained_intron		10	-1	62430621	620
ENSMUSG00000044221	protein_coding	Grsf1	ENSMUST00000078945	protein_coding	principal1	5	-1	88676171	2538
ENSMUSG00000020079	protein_coding	Supv3l1	ENSMUST00000159042	retained_intron		10	-1	62430968	890
ENSMUSG00000020079	protein_coding	Supv3l1	ENSMUST00000161941	processed_transcript		10	-1	62433127	117
ENSMUSG00000044221	protein_coding	Grsf1	ENSMUST00000113234	protein_coding		5	-1	88675666	2286
ENSMUSG00000039497	protein_coding	Dse	ENSMUST00000048010	protein_coding	principal1	10	-1	34207715	4389
ENSMUSG00000037119	protein_coding	Fam91a1	ENSMUST00000037270	protein_coding	principal1	15	1	58415468	5560
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000200567	retained_intron		5	1	87666208	292
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000196500	retained_intron		5	1	87666208	1328
ENSMUSG00000044221	protein_coding	Grsf1	ENSMUST00000130408	retained_intron		5	-1	88671405	899
ENSMUSG00000039497	protein_coding	Dse	ENSMUST00000217051	protein_coding		10	-1	34176245	1249
ENSMUSG00000037119	protein_coding	Fam91a1	ENSMUST00000227796	retained_intron		15	1	58432260	708
ENSMUSG00000039497	protein_coding	Dse	ENSMUST00000216774	processed_transcript		10	-1	34155264	267
ENSMUSG00000037119	protein_coding	Fam91a1	ENSMUST00000227770	retained_intron		15	1	58432497	737
ENSMUSG00000039497	protein_coding	Dse	ENSMUST00000215547	protein_coding		10	-1	34207635	641
ENSMUSG00000105135	TEC	Gm43667	ENSMUST00000198616	TEC		3	-1	34055429	1095
ENSMUSG00000039497	protein_coding	Dse	ENSMUST00000216194	processed_transcript		10	-1	34207077	287
ENSMUSG00000024182	protein_coding	Axin1	ENSMUST00000074370	protein_coding	principal3	17	1	26138688	3777
ENSMUSG00000037119	protein_coding	Fam91a1	ENSMUST00000228576	retained_intron		15	1	58442733	813
ENSMUSG00000105176	TEC	Gm43668	ENSMUST00000197014	TEC		3	1	34070659	5342
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000100167	protein_coding	principal1	16	1	14361560	6792
ENSMUSG00000020627	protein_coding	Klhl29	ENSMUST00000020958	protein_coding	principal1	12	-1	5375682	7041
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000108386	protein_coding	principal1	4	1	3938888	524
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000230780	retained_intron		16	1	14361567	2803
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000154748	protein_coding		16	1	14361576	603
ENSMUSG00000042496	protein_coding	Prdm10	ENSMUST00000215499	protein_coding	alternative2	9	1	31280549	6772
ENSMUSG00000020627	protein_coding	Klhl29	ENSMUST00000218384	protein_coding		12	-1	5291381	2716
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000134776	protein_coding		16	1	14361581	614
ENSMUSG00000112020	TEC	Gm48532	ENSMUST00000219031	TEC		12	-1	5235964	809
ENSMUSG00000044221	protein_coding	Grsf1	ENSMUST00000153565	protein_coding		5	-1	88675670	776
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000144676	protein_coding		16	1	14365762	390
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000114961	processed_transcript		16	-1	34573532	6128
ENSMUSG00000044221	protein_coding	Grsf1	ENSMUST00000133532	protein_coding		5	-1	88675192	485
ENSMUSG00000042496	protein_coding	Prdm10	ENSMUST00000215847	protein_coding	alternative2	9	1	31313553	3519
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000144074	processed_transcript		16	1	14393953	271
ENSMUSG00000071550	protein_coding	Cfap44	ENSMUST00000120049	protein_coding	principal1	16	1	44401421	6199
ENSMUSG00000044221	protein_coding	Grsf1	ENSMUST00000150438	protein_coding		5	-1	88675242	425
ENSMUSG00000042496	protein_coding	Prdm10	ENSMUST00000136144	retained_intron		9	1	31314727	3064
ENSMUSG00000044221	protein_coding	Grsf1	ENSMUST00000137725	processed_transcript		5	-1	88675199	321
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000156089	retained_intron		16	1	14402360	4404
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000200344	retained_intron		5	1	87666208	801
ENSMUSG00000024182	protein_coding	Axin1	ENSMUST00000163421	protein_coding	alternative2	17	1	26138950	2890
ENSMUSG00000113386	sense_intronic	Gm47357	ENSMUST00000222121	sense_intronic		12	-1	34628638	2705
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000134960	retained_intron		16	1	14461008	1768
ENSMUSG00000089780	sense_intronic	Gm16306	ENSMUST00000160568	sense_intronic		7	1	6399054	176
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000121110	protein_coding	principal1	4	1	3938888	381
ENSMUSG00000090824	protein_coding	Olfr1344	ENSMUST00000218906	protein_coding	principal1	7	1	6438688	2590
ENSMUSG00000024182	protein_coding	Axin1	ENSMUST00000168282	protein_coding		17	1	26143347	465
ENSMUSG00000042496	protein_coding	Prdm10	ENSMUST00000074510	protein_coding	principal2	9	1	31315107	3408
ENSMUSG00000023088	protein_coding	Abcc1	ENSMUST00000146032	retained_intron		16	1	14461013	2642
ENSMUSG00000024182	protein_coding	Axin1	ENSMUST00000169268	retained_intron		17	1	26188153	291
ENSMUSG00000090824	protein_coding	Olfr1344	ENSMUST00000168341	protein_coding	principal1	7	1	6439836	1061
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000114960	protein_coding		16	-1	34514048	6452
ENSMUSG00000111246	lincRNA	4930517E14Rik	ENSMUST00000214795	lincRNA		9	-1	31280992	2972
ENSMUSG00000071550	protein_coding	Cfap44	ENSMUST00000142648	retained_intron		16	1	44408602	2756
ENSMUSG00000024182	protein_coding	Axin1	ENSMUST00000118904	protein_coding	alternative2	17	1	26138828	2833
ENSMUSG00000108885	lincRNA	4930402F11Rik	ENSMUST00000207348	lincRNA		7	1	69496094	1000
ENSMUSG00000108885	lincRNA	4930402F11Rik	ENSMUST00000208612	lincRNA		7	1	69496106	1405
ENSMUSG00000108885	lincRNA	4930402F11Rik	ENSMUST00000207781	lincRNA		7	1	69496117	1178
ENSMUSG00000045929	protein_coding	Gm20715	ENSMUST00000054781	nonsense_mediated_decay	principal1	7	1	6410277	4460
ENSMUSG00000114818	lincRNA	Gm35164	ENSMUST00000224853	lincRNA		14	1	28649672	358
ENSMUSG00000071550	protein_coding	Cfap44	ENSMUST00000128916	processed_transcript		16	1	44432043	488
ENSMUSG00000114818	lincRNA	Gm35164	ENSMUST00000224806	lincRNA		14	1	28649672	1725
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000149544	protein_coding		4	1	3938890	426
ENSMUSG00000108885	lincRNA	4930402F11Rik	ENSMUST00000208289	lincRNA		7	1	69500096	606
ENSMUSG00000114818	lincRNA	Gm35164	ENSMUST00000224019	lincRNA		14	1	28649759	222
ENSMUSG00000071550	protein_coding	Cfap44	ENSMUST00000127303	retained_intron		16	1	44470444	1904
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000121210	protein_coding		4	1	3938914	548
ENSMUSG00000114201	processed_pseudogene	Gm18079	ENSMUST00000224587	processed_pseudogene		14	1	28724375	885
ENSMUSG00000114577	lincRNA	Gm35217	ENSMUST00000225272	lincRNA		14	-1	28798421	602
ENSMUSG00000071550	protein_coding	Cfap44	ENSMUST00000099742	protein_coding	principal1	16	1	44394799	6583
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000114954	protein_coding		16	-1	34263200	4677
ENSMUSG00000070572	processed_pseudogene	Trmt112-ps2	ENSMUST00000117987	processed_pseudogene		4	1	149457329	378
ENSMUSG00000038563	protein_coding	Efl1	ENSMUST00000039881	protein_coding	principal1	7	1	82648641	3610
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000089655	protein_coding		16	-1	34514086	6506
ENSMUSG00000024787	protein_coding	Snx15	ENSMUST00000025702	protein_coding	principal1	19	-1	6128304	1635
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000114953	protein_coding		16	-1	34262965	4722
ENSMUSG00000038563	protein_coding	Efl1	ENSMUST00000207868	protein_coding		7	1	82649133	1537
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000114949	protein_coding		16	-1	34263193	3618
ENSMUSG00000024787	protein_coding	Snx15	ENSMUST00000154601	protein_coding		19	-1	6128147	767
ENSMUSG00000038563	protein_coding	Efl1	ENSMUST00000153265	processed_transcript		7	1	82670229	543
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000151491	protein_coding		16	-1	34513944	4209
ENSMUSG00000112014	antisense	Gm48435	ENSMUST00000219668	antisense		10	1	121350460	289
ENSMUSG00000038563	protein_coding	Efl1	ENSMUST00000179489	protein_coding	principal1	7	1	82648614	3608
ENSMUSG00000112014	antisense	Gm48435	ENSMUST00000218746	antisense		10	1	121350828	817
ENSMUSG00000111940	processed_pseudogene	Gm4478	ENSMUST00000218322	processed_pseudogene		10	1	121343176	483
ENSMUSG00000024787	protein_coding	Snx15	ENSMUST00000124171	retained_intron		19	-1	6121642	376
ENSMUSG00000093536	protein_coding	Smim17	ENSMUST00000161855	protein_coding	principal1	7	1	6398715	664
ENSMUSG00000040054	protein_coding	Baz2a	ENSMUST00000218772	retained_intron		10	1	128091577	3721
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000114947	protein_coding		16	-1	34262839	2922
ENSMUSG00000056492	protein_coding	Adgrf5	ENSMUST00000226087	protein_coding	principal1	17	1	43360451	4954
ENSMUSG00000093536	protein_coding	Smim17	ENSMUST00000159318	processed_transcript		7	1	6398748	453
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000137216	retained_intron		16	-1	34262910	2668
ENSMUSG00000056492	protein_coding	Adgrf5	ENSMUST00000224278	protein_coding		17	1	43389482	698
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000124430	processed_transcript		16	-1	34252315	534
ENSMUSG00000024787	protein_coding	Snx15	ENSMUST00000124964	processed_transcript		19	-1	6127807	772
ENSMUSG00000007877	protein_coding	Tcap	ENSMUST00000008021	protein_coding	principal1	11	1	98383811	948
ENSMUSG00000024787	protein_coding	Snx15	ENSMUST00000235824	nonsense_mediated_decay		19	-1	6123953	725
ENSMUSG00000030641	protein_coding	Ddias	ENSMUST00000032877	protein_coding	principal1	7	-1	92874247	3387
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000156668	processed_transcript		16	-1	34361799	373
ENSMUSG00000024787	protein_coding	Snx15	ENSMUST00000138931	protein_coding		19	-1	6128189	733
ENSMUSG00000056492	protein_coding	Adgrf5	ENSMUST00000225466	protein_coding		17	1	43389488	491
ENSMUSG00000061751	protein_coding	Kalrn	ENSMUST00000132569	processed_transcript		16	-1	34514115	523
ENSMUSG00000029321	protein_coding	Slc10a6	ENSMUST00000031263	protein_coding	principal1	5	-1	103629403	2124
ENSMUSG00000024787	protein_coding	Snx15	ENSMUST00000150718	retained_intron		19	-1	6122287	427
ENSMUSG00000093536	protein_coding	Smim17	ENSMUST00000160218	protein_coding	principal1	7	1	6415175	3197
ENSMUSG00000116985	processed_pseudogene	Gm49669	ENSMUST00000231639	processed_pseudogene		17	1	15459805	356
ENSMUSG00000056492	protein_coding	Adgrf5	ENSMUST00000225962	protein_coding		17	1	43427012	4868
ENSMUSG00000030641	protein_coding	Ddias	ENSMUST00000208356	protein_coding		7	-1	92874237	840
ENSMUSG00000084126	processed_pseudogene	Gm15844	ENSMUST00000118016	processed_pseudogene		5	1	103624471	576
ENSMUSG00000024787	protein_coding	Snx15	ENSMUST00000129076	retained_intron		19	-1	6128133	586
ENSMUSG00000046070	protein_coding	Igfals	ENSMUST00000234675	processed_transcript		17	1	24865997	1287
ENSMUSG00000090179	processed_pseudogene	Gm16307	ENSMUST00000161269	processed_pseudogene		7	-1	6405384	210
ENSMUSG00000046070	protein_coding	Igfals	ENSMUST00000234802	processed_transcript		17	1	24865997	1225
ENSMUSG00000056492	protein_coding	Adgrf5	ENSMUST00000225004	nonsense_mediated_decay		17	1	43430632	830
ENSMUSG00000030641	protein_coding	Ddias	ENSMUST00000209074	protein_coding		7	-1	92874232	417
ENSMUSG00000101434	unprocessed_pseudogene	Gm29211	ENSMUST00000191470	unprocessed_pseudogene		Y	-1	46717285	664
ENSMUSG00000046070	protein_coding	Igfals	ENSMUST00000234862	processed_transcript		17	1	24877656	995
ENSMUSG00000030641	protein_coding	Ddias	ENSMUST00000207931	processed_transcript		7	-1	92874176	434
ENSMUSG00000103303	TEC	Gm37802	ENSMUST00000194998	TEC		1	-1	156858859	2643
ENSMUSG00000046070	protein_coding	Igfals	ENSMUST00000234188	processed_transcript		17	1	24878215	500
ENSMUSG00000100061	unprocessed_pseudogene	Gm29212	ENSMUST00000190384	unprocessed_pseudogene		Y	1	46727776	615
ENSMUSG00000056492	protein_coding	Adgrf5	ENSMUST00000113599	protein_coding	principal1	17	1	43389466	8535
ENSMUSG00000110967	lincRNA	Gm40608	ENSMUST00000213692	lincRNA		10	-1	21189182	654
ENSMUSG00000102960	TEC	Gm37943	ENSMUST00000194053	TEC		1	-1	156876120	3944
ENSMUSG00000086380	lincRNA	Gm11195	ENSMUST00000135030	lincRNA		11	1	78444107	441
ENSMUSG00000078508	protein_coding	Gm13128	ENSMUST00000105751	protein_coding	principal1	4	1	144330249	1745
ENSMUSG00000111005	lincRNA	Gm33619	ENSMUST00000215633	lincRNA		10	1	21182695	662
ENSMUSG00000111005	lincRNA	Gm33619	ENSMUST00000216598	lincRNA		10	1	21186947	595
ENSMUSG00000067719	processed_pseudogene	Gm10221	ENSMUST00000088299	processed_pseudogene		5	-1	24581862	309
ENSMUSG00000046070	protein_coding	Igfals	ENSMUST00000050714	protein_coding	principal1	17	1	24878258	2625
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000121651	protein_coding	principal1	4	1	3938914	620
ENSMUSG00000017314	protein_coding	Mpp2	ENSMUST00000017458	protein_coding	principal2	11	-1	102088515	4089
ENSMUSG00000046070	protein_coding	Igfals	ENSMUST00000234754	processed_transcript		17	1	24878757	2064
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000041122	protein_coding	principal1	4	1	3938914	672
ENSMUSG00000017314	protein_coding	Mpp2	ENSMUST00000100398	protein_coding	alternative1	11	-1	102082484	3577
ENSMUSG00000089834	processed_pseudogene	Gm16303	ENSMUST00000161498	processed_pseudogene		6	1	125739406	390
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000120732	protein_coding		4	1	3938914	711
ENSMUSG00000017314	protein_coding	Mpp2	ENSMUST00000127522	processed_transcript		11	-1	102082419	830
ENSMUSG00000049130	protein_coding	C5ar1	ENSMUST00000168818	protein_coding	principal1	7	-1	16259338	2540
ENSMUSG00000017314	protein_coding	Mpp2	ENSMUST00000147126	retained_intron		11	-1	102085738	612
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000150618	nonsense_mediated_decay		4	1	3938914	2546
ENSMUSG00000105571	TEC	Gm43662	ENSMUST00000198310	TEC		5	1	14778932	2271
ENSMUSG00000001552	protein_coding	Jup	ENSMUST00000001592	protein_coding	principal1	11	-1	100397749	3205
ENSMUSG00000021130	protein_coding	Galnt16	ENSMUST00000219993	protein_coding	principal1	12	1	80518277	4222
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000119307	protein_coding	principal1	4	1	3938920	889
ENSMUSG00000017314	protein_coding	Mpp2	ENSMUST00000130903	processed_transcript		11	-1	102088467	368
ENSMUSG00000021130	protein_coding	Galnt16	ENSMUST00000218943	protein_coding	principal1	12	1	80518802	2047
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000123769	protein_coding		4	1	3939043	526
ENSMUSG00000049130	protein_coding	C5ar1	ENSMUST00000209442	protein_coding		7	-1	16259540	674
ENSMUSG00000001552	protein_coding	Jup	ENSMUST00000151476	processed_transcript		11	-1	100374125	441
ENSMUSG00000017314	protein_coding	Mpp2	ENSMUST00000132687	processed_transcript		11	-1	102088455	350
ENSMUSG00000049130	protein_coding	C5ar1	ENSMUST00000050770	protein_coding	principal1	7	-1	16259540	2481
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000128829	retained_intron		4	1	3939422	279
ENSMUSG00000001552	protein_coding	Jup	ENSMUST00000107403	protein_coding	principal1	11	-1	100397749	2386
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000131746	nonsense_mediated_decay		4	1	3939500	417
ENSMUSG00000001552	protein_coding	Jup	ENSMUST00000152774	processed_transcript		11	-1	100373308	758
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000119403	protein_coding	principal1	4	1	3940854	695
ENSMUSG00000021130	protein_coding	Galnt16	ENSMUST00000021558	protein_coding	principal1	12	1	80518990	3922
ENSMUSG00000001552	protein_coding	Jup	ENSMUST00000149798	processed_transcript		11	-1	100383092	667
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000137037	processed_transcript		4	1	3943414	747
ENSMUSG00000042198	protein_coding	Chchd7	ENSMUST00000151519	retained_intron		4	1	3946808	642
ENSMUSG00000032046	protein_coding	Abhd12	ENSMUST00000156641	processed_transcript		2	-1	150842570	1292
ENSMUSG00000033544	protein_coding	Angptl1	ENSMUST00000027885	protein_coding	principal1	1	1	156838562	2651
ENSMUSG00000021130	protein_coding	Galnt16	ENSMUST00000218648	retained_intron		12	1	80584116	2827
ENSMUSG00000038115	protein_coding	Ano2	ENSMUST00000159111	retained_intron		6	1	125690419	3181
ENSMUSG00000021130	protein_coding	Galnt16	ENSMUST00000217926	protein_coding		12	1	80592427	771
ENSMUSG00000033544	protein_coding	Angptl1	ENSMUST00000111720	protein_coding		1	1	156838942	1332
ENSMUSG00000001552	protein_coding	Jup	ENSMUST00000155746	processed_transcript		11	-1	100397763	684
ENSMUSG00000101964	transcribed_processed_pseudogene	Gm28693	ENSMUST00000189622	processed_transcript		1	-1	156837924	2638
ENSMUSG00000101964	transcribed_processed_pseudogene	Gm28693	ENSMUST00000190758	transcribed_processed_pseudogene		1	-1	156835939	331
ENSMUSG00000001552	protein_coding	Jup	ENSMUST00000128268	processed_transcript		11	-1	100386741	502
ENSMUSG00000001552	protein_coding	Jup	ENSMUST00000123903	processed_transcript		11	-1	100386770	742
ENSMUSG00000021130	protein_coding	Galnt16	ENSMUST00000219267	nonsense_mediated_decay		12	1	80598103	502
ENSMUSG00000112606	processed_pseudogene	Gm46364	ENSMUST00000218548	processed_pseudogene		12	1	80613296	319
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000199506	protein_coding		5	1	87666227	433
ENSMUSG00000097801	bidirectional_promoter_lncRNA	Gm26777	ENSMUST00000181852	bidirectional_promoter_lncRNA		12	-1	80518916	2573
ENSMUSG00000112701	lincRNA	2310002D06Rik	ENSMUST00000218103	lincRNA		12	1	80507206	508
ENSMUSG00000029663	protein_coding	Gngt1	ENSMUST00000031673	protein_coding	principal1	6	1	3993792	1183
ENSMUSG00000112047	processed_pseudogene	Gm47852	ENSMUST00000219205	processed_pseudogene		12	-1	80629558	265
ENSMUSG00000029663	protein_coding	Gngt1	ENSMUST00000159369	retained_intron		6	1	3993797	2976
ENSMUSG00000112105	processed_pseudogene	Rps7-ps2	ENSMUST00000219719	processed_pseudogene		12	-1	3523268	1347
ENSMUSG00000052302	protein_coding	Tbc1d30	ENSMUST00000064107	protein_coding	principal1	10	-1	121311189	5695
ENSMUSG00000026240	protein_coding	Cops7b	ENSMUST00000121534	protein_coding	principal1	1	1	86582904	5383
ENSMUSG00000066975	protein_coding	Cryba4	ENSMUST00000112385	protein_coding	principal1	5	-1	112252518	808
ENSMUSG00000052302	protein_coding	Tbc1d30	ENSMUST00000218111	nonsense_mediated_decay		10	-1	121294648	1638
ENSMUSG00000026240	protein_coding	Cops7b	ENSMUST00000149542	protein_coding		1	1	86582938	630
ENSMUSG00000052302	protein_coding	Tbc1d30	ENSMUST00000218688	retained_intron		10	-1	121297035	497
ENSMUSG00000066975	protein_coding	Cryba4	ENSMUST00000112383	protein_coding		5	-1	112251162	754
ENSMUSG00000052302	protein_coding	Tbc1d30	ENSMUST00000219179	protein_coding		10	-1	121351278	721
ENSMUSG00000026240	protein_coding	Cops7b	ENSMUST00000138280	nonsense_mediated_decay		1	1	86587131	1950
ENSMUSG00000052302	protein_coding	Tbc1d30	ENSMUST00000219354	processed_transcript		10	-1	121347242	574
ENSMUSG00000026240	protein_coding	Cops7b	ENSMUST00000122884	nonsense_mediated_decay		1	1	86587142	2578
ENSMUSG00000066975	protein_coding	Cryba4	ENSMUST00000086629	protein_coding	principal1	5	-1	112251802	746
ENSMUSG00000026240	protein_coding	Cops7b	ENSMUST00000127219	processed_transcript		1	1	86596740	286
ENSMUSG00000026240	protein_coding	Cops7b	ENSMUST00000027446	protein_coding	principal1	1	1	86587100	2231
ENSMUSG00000026153	protein_coding	Fam135a	ENSMUST00000187619	protein_coding		1	-1	24026759	2013
ENSMUSG00000007827	protein_coding	Ankrd26	ENSMUST00000112830	protein_coding	principal1	6	-1	118562226	6930
ENSMUSG00000024937	protein_coding	Ehbp1l1	ENSMUST00000049295	protein_coding	principal4	19	-1	5726317	6404
ENSMUSG00000007827	protein_coding	Ankrd26	ENSMUST00000188172	retained_intron		6	-1	118523235	707
ENSMUSG00000007827	protein_coding	Ankrd26	ENSMUST00000188022	retained_intron		6	-1	118549096	389
ENSMUSG00000030474	protein_coding	Siglece	ENSMUST00000032667	protein_coding	principal1	7	-1	43660161	1849
ENSMUSG00000014769	protein_coding	Psmb1	ENSMUST00000014913	protein_coding	principal1	17	-1	15498298	1758
ENSMUSG00000030474	protein_coding	Siglece	ENSMUST00000206421	protein_coding		7	-1	43659353	693
ENSMUSG00000014769	protein_coding	Psmb1	ENSMUST00000232500	protein_coding		17	-1	15499751	1435
ENSMUSG00000041669	protein_coding	Prima1	ENSMUST00000123655	processed_transcript		12	-1	103202884	851
ENSMUSG00000014769	protein_coding	Psmb1	ENSMUST00000231696	processed_transcript		17	-1	15478589	1762
ENSMUSG00000014769	protein_coding	Psmb1	ENSMUST00000231341	protein_coding		17	-1	15498339	1970
ENSMUSG00000084312	unprocessed_pseudogene	Gm13122	ENSMUST00000118380	unprocessed_pseudogene		4	-1	144346049	453
ENSMUSG00000032046	protein_coding	Abhd12	ENSMUST00000056149	protein_coding	principal1	2	-1	150904741	1999
ENSMUSG00000032046	protein_coding	Abhd12	ENSMUST00000141899	nonsense_mediated_decay		2	-1	150904731	1969
ENSMUSG00000024937	protein_coding	Ehbp1l1	ENSMUST00000075606	protein_coding	alternative2	19	-1	5726270	2852
ENSMUSG00000032046	protein_coding	Abhd12	ENSMUST00000145826	nonsense_mediated_decay		2	-1	150839722	353
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000136377	protein_coding		4	1	128654738	941
ENSMUSG00000024937	protein_coding	Ehbp1l1	ENSMUST00000236215	protein_coding	alternative2	19	-1	5726270	3160
ENSMUSG00000070619	protein_coding	Gm13119	ENSMUST00000094526	protein_coding	principal1	4	1	144357942	2094
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000148723	retained_intron		4	1	128688738	774
ENSMUSG00000104063	protein_coding	Pcdhgb7	ENSMUST00000194928	protein_coding	principal1	18	1	37751600	4713
ENSMUSG00000024937	protein_coding	Ehbp1l1	ENSMUST00000235730	protein_coding	alternative2	19	-1	5726275	2815
ENSMUSG00000024184	protein_coding	Pdia2	ENSMUST00000039113	protein_coding	principal2	17	-1	26199087	1721
ENSMUSG00000103458	protein_coding	Gm42416	ENSMUST00000115661	protein_coding	principal1	18	1	36952741	2856
ENSMUSG00000032046	protein_coding	Abhd12	ENSMUST00000138608	processed_transcript		2	-1	150904662	1334
ENSMUSG00000024937	protein_coding	Ehbp1l1	ENSMUST00000237367	nonsense_mediated_decay		19	-1	5710670	545
ENSMUSG00000032046	protein_coding	Abhd12	ENSMUST00000155119	retained_intron		2	-1	150851490	700
ENSMUSG00000024184	protein_coding	Pdia2	ENSMUST00000148134	protein_coding		17	-1	26196916	539
ENSMUSG00000024937	protein_coding	Ehbp1l1	ENSMUST00000237081	protein_coding		19	-1	5726281	2493
ENSMUSG00000073721	protein_coding	Pramef20	ENSMUST00000121109	protein_coding	principal1	4	-1	144377933	1434
ENSMUSG00000024937	protein_coding	Ehbp1l1	ENSMUST00000237868	retained_intron		19	-1	5717703	821
ENSMUSG00000024184	protein_coding	Pdia2	ENSMUST00000120333	protein_coding	alternative2	17	-1	26199062	1661
ENSMUSG00000024184	protein_coding	Pdia2	ENSMUST00000142410	protein_coding		17	-1	26199008	673
ENSMUSG00000032046	protein_coding	Abhd12	ENSMUST00000129228	nonsense_mediated_decay		2	-1	150904647	597
ENSMUSG00000100125	unprocessed_pseudogene	Gm28739	ENSMUST00000185415	unprocessed_pseudogene		Y	-1	81545774	696
ENSMUSG00000040725	protein_coding	Hnrnpul1	ENSMUST00000206832	protein_coding	principal1	7	-1	25754757	3784
ENSMUSG00000103800	protein_coding	Pcdha8	ENSMUST00000194038	protein_coding	principal1	18	1	36992371	5338
ENSMUSG00000058325	protein_coding	Dock1	ENSMUST00000211570	retained_intron		7	1	134670654	3557
ENSMUSG00000038115	protein_coding	Ano2	ENSMUST00000160496	protein_coding	principal1	6	1	125690419	3925
ENSMUSG00000026153	protein_coding	Fam135a	ENSMUST00000188712	nonsense_mediated_decay		1	-1	24086526	5122
ENSMUSG00000101962	lincRNA	Gm28741	ENSMUST00000189417	lincRNA		Y	1	81618972	1498
ENSMUSG00000040725	protein_coding	Hnrnpul1	ENSMUST00000043765	protein_coding		7	-1	25754750	3354
ENSMUSG00000061601	protein_coding	Pclo	ENSMUST00000182407	protein_coding		5	1	14514918	16846
ENSMUSG00000073594	antisense	Gm10545	ENSMUST00000097612	antisense		18	-1	37020679	4969
ENSMUSG00000101962	lincRNA	Gm28741	ENSMUST00000189713	lincRNA		Y	1	81619425	433
ENSMUSG00000100978	unprocessed_pseudogene	Gm20912	ENSMUST00000189184	unprocessed_pseudogene		Y	-1	81725302	693
ENSMUSG00000041669	protein_coding	Prima1	ENSMUST00000127843	nonsense_mediated_decay		12	-1	103242146	1076
ENSMUSG00000103092	protein_coding	Pcdha5	ENSMUST00000192168	protein_coding	principal1	18	1	36960440	5206
ENSMUSG00000100519	unprocessed_pseudogene	Gm20801	ENSMUST00000187654	unprocessed_pseudogene		Y	-1	81799967	678
ENSMUSG00000100598	unprocessed_pseudogene	Gm28742	ENSMUST00000191001	unprocessed_pseudogene		Y	-1	81832393	615
ENSMUSG00000100591	unprocessed_pseudogene	Gm21919	ENSMUST00000185653	unprocessed_pseudogene		Y	-1	81869292	696
ENSMUSG00000102918	protein_coding	Pcdhgc3	ENSMUST00000194447	retained_intron		18	1	37806364	3380
ENSMUSG00000100879	lincRNA	Gm28743	ENSMUST00000189014	lincRNA		Y	-1	81878760	2168
ENSMUSG00000040725	protein_coding	Hnrnpul1	ENSMUST00000108401	protein_coding		7	-1	25754701	1240
ENSMUSG00000085953	antisense	Gm15496	ENSMUST00000129578	antisense		3	1	31285587	2456
ENSMUSG00000085953	antisense	Gm15496	ENSMUST00000195091	antisense		3	1	31310923	326
ENSMUSG00000099480	lincRNA	Gm28124	ENSMUST00000191099	lincRNA		Y	1	81910690	1498
ENSMUSG00000040725	protein_coding	Hnrnpul1	ENSMUST00000206260	retained_intron		7	-1	25741577	2296
ENSMUSG00000040725	protein_coding	Hnrnpul1	ENSMUST00000206041	retained_intron		7	-1	25744367	2615
ENSMUSG00000099480	lincRNA	Gm28124	ENSMUST00000188498	lincRNA		Y	1	81911142	438
ENSMUSG00000061601	protein_coding	Pclo	ENSMUST00000030691	protein_coding	principal1	5	1	14514918	20084
ENSMUSG00000026696	protein_coding	Vamp4	ENSMUST00000132158	protein_coding		1	1	162570515	2752
ENSMUSG00000041669	protein_coding	Prima1	ENSMUST00000074416	protein_coding	principal1	12	-1	103242150	909
ENSMUSG00000085396	processed_transcript	Firre	ENSMUST00000205059	processed_transcript		X	-1	50564883	884
ENSMUSG00000060878	protein_coding	Olfr1420	ENSMUST00000215766	processed_transcript		19	1	11886586	2033
ENSMUSG00000060878	protein_coding	Olfr1420	ENSMUST00000217281	protein_coding	principal1	19	1	11886565	2998
ENSMUSG00000101914	unprocessed_pseudogene	Gm21790	ENSMUST00000191392	unprocessed_pseudogene		Y	-1	82019921	693
ENSMUSG00000041669	protein_coding	Prima1	ENSMUST00000156176	nonsense_mediated_decay		12	-1	103242128	562
ENSMUSG00000041669	protein_coding	Prima1	ENSMUST00000155547	processed_transcript		12	-1	103236024	150
ENSMUSG00000060878	protein_coding	Olfr1420	ENSMUST00000072784	protein_coding	principal1	19	1	11895607	1444
ENSMUSG00000038115	protein_coding	Ano2	ENSMUST00000161619	nonsense_mediated_decay		6	1	125710626	3614
ENSMUSG00000099834	unprocessed_pseudogene	Gm21728	ENSMUST00000188442	unprocessed_pseudogene		Y	-1	82094505	695
ENSMUSG00000109412	TEC	Gm44535	ENSMUST00000208889	TEC		7	1	69579708	3136
ENSMUSG00000094082	processed_pseudogene	Gm12452	ENSMUST00000117128	processed_pseudogene		4	1	49412307	331
ENSMUSG00000038115	protein_coding	Ano2	ENSMUST00000161293	processed_transcript		6	1	125711476	755
ENSMUSG00000100298	lincRNA	Gm28126	ENSMUST00000185286	lincRNA		Y	1	82110703	356
ENSMUSG00000038115	protein_coding	Ano2	ENSMUST00000160317	processed_transcript		6	1	125815534	614
ENSMUSG00000038115	protein_coding	Ano2	ENSMUST00000159984	nonsense_mediated_decay		6	1	125815535	2702
ENSMUSG00000026696	protein_coding	Vamp4	ENSMUST00000135241	protein_coding	principal1	1	1	162570590	1461
ENSMUSG00000061601	protein_coding	Pclo	ENSMUST00000182426	retained_intron		5	1	14514993	17063
ENSMUSG00000061601	protein_coding	Pclo	ENSMUST00000182915	protein_coding		5	1	14680863	6738
ENSMUSG00000106411	TEC	Gm42445	ENSMUST00000196996	TEC		5	1	14611652	2893
ENSMUSG00000086791	antisense	Gm12147	ENSMUST00000144024	antisense		11	-1	43311088	182
ENSMUSG00000105578	TEC	Gm43663	ENSMUST00000198643	TEC		5	1	14665649	1505
ENSMUSG00000083808	processed_pseudogene	Gm3828	ENSMUST00000121817	processed_pseudogene		10	-1	80954710	257
ENSMUSG00000106491	TEC	Gm42446	ENSMUST00000199783	TEC		5	1	14563338	3284
ENSMUSG00000086170	antisense	Gm12144	ENSMUST00000136288	antisense		11	-1	43232264	1292
ENSMUSG00000098233	antisense	Gm26954	ENSMUST00000182753	antisense		5	-1	14723664	762
ENSMUSG00000085533	antisense	Gm12146	ENSMUST00000127604	antisense		11	-1	43259784	518
ENSMUSG00000098233	antisense	Gm26954	ENSMUST00000182106	antisense		5	-1	14723649	622
ENSMUSG00000026696	protein_coding	Vamp4	ENSMUST00000128704	retained_intron		1	1	162570627	682
ENSMUSG00000026696	protein_coding	Vamp4	ENSMUST00000194810	protein_coding		1	1	162570769	600
ENSMUSG00000055415	protein_coding	Atp10b	ENSMUST00000148911	processed_transcript		11	1	43149877	3477
ENSMUSG00000097976	antisense	Gm26918	ENSMUST00000182496	antisense		5	-1	14539852	728
ENSMUSG00000104672	TEC	Gm43665	ENSMUST00000198672	TEC		5	1	14804901	1659
ENSMUSG00000106048	TEC	Gm42444	ENSMUST00000199366	TEC		5	1	14604049	4558
ENSMUSG00000118646	protein_coding	AC160405.1	ENSMUST00000239481	protein_coding	principal1	10	-1	78307619	383
ENSMUSG00000026696	protein_coding	Vamp4	ENSMUST00000050010	protein_coding		1	1	162570828	2532
ENSMUSG00000104625	TEC	Gm42448	ENSMUST00000197122	TEC		5	1	14599919	2644
ENSMUSG00000112442	TEC	Gm47992	ENSMUST00000219008	TEC		10	1	78298315	1987
ENSMUSG00000105485	TEC	Gm42447	ENSMUST00000200102	TEC		5	1	14596864	2903
ENSMUSG00000026696	protein_coding	Vamp4	ENSMUST00000150040	protein_coding	principal1	1	1	162570837	901
ENSMUSG00000100611	unprocessed_pseudogene	Gm21247	ENSMUST00000189954	unprocessed_pseudogene		Y	1	46757399	693
ENSMUSG00000026696	protein_coding	Vamp4	ENSMUST00000155003	protein_coding	principal1	1	1	162571226	1428
ENSMUSG00000085396	processed_transcript	Firre	ENSMUST00000124842	processed_transcript		X	-1	50635261	1145
ENSMUSG00000079478	protein_coding	Znrd2	ENSMUST00000025885	protein_coding	principal1	19	-1	5731727	699
ENSMUSG00000085396	processed_transcript	Firre	ENSMUST00000204729	processed_transcript		X	-1	50562871	525
ENSMUSG00000026696	protein_coding	Vamp4	ENSMUST00000138499	processed_transcript		1	1	162574821	830
ENSMUSG00000101138	lincRNA	Gm29210	ENSMUST00000186332	lincRNA		Y	-1	46850004	622
ENSMUSG00000081293	processed_pseudogene	Gm11673	ENSMUST00000117846	processed_pseudogene		2	1	143877949	331
ENSMUSG00000101138	lincRNA	Gm29210	ENSMUST00000187495	lincRNA		Y	-1	46850004	437
ENSMUSG00000079478	protein_coding	Znrd2	ENSMUST00000160141	retained_intron		19	-1	5731660	826
ENSMUSG00000080711	processed_pseudogene	Gm11686	ENSMUST00000122397	processed_pseudogene		2	1	143881177	333
ENSMUSG00000069072	protein_coding	Slc7a14	ENSMUST00000091259	protein_coding	principal1	3	-1	31310378	8897
ENSMUSG00000100871	lincRNA	Gm29213	ENSMUST00000186199	lincRNA		Y	-1	46872940	174
ENSMUSG00000100871	lincRNA	Gm29213	ENSMUST00000189703	lincRNA		Y	-1	46872940	484
ENSMUSG00000081440	processed_pseudogene	Gm12464	ENSMUST00000121385	processed_pseudogene		3	1	100413560	1016
ENSMUSG00000110323	unprocessed_pseudogene	Olfr1345-ps1	ENSMUST00000210627	unprocessed_pseudogene		7	1	6446874	244
ENSMUSG00000079478	protein_coding	Znrd2	ENSMUST00000159693	protein_coding		19	-1	5731732	705
ENSMUSG00000069072	protein_coding	Slc7a14	ENSMUST00000108245	protein_coding		3	-1	31258394	3080
ENSMUSG00000079478	protein_coding	Znrd2	ENSMUST00000162976	protein_coding		19	-1	5731475	526
ENSMUSG00000028590	antisense	Pramef12os	ENSMUST00000133334	antisense		4	1	144404868	767
ENSMUSG00000085396	processed_transcript	Firre	ENSMUST00000204991	processed_transcript		X	-1	50570199	1754
ENSMUSG00000079478	protein_coding	Znrd2	ENSMUST00000159008	retained_intron		19	-1	5731699	610
ENSMUSG00000020407	protein_coding	Upp1	ENSMUST00000020677	protein_coding	principal1	11	1	9118103	1277
ENSMUSG00000085396	processed_transcript	Firre	ENSMUST00000203672	processed_transcript		X	-1	50561028	490
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000152676	processed_transcript		17	1	26202951	2086
ENSMUSG00000089766	antisense	Gm16538	ENSMUST00000162407	antisense		19	1	5727206	442
ENSMUSG00000020407	protein_coding	Upp1	ENSMUST00000101525	protein_coding	principal1	11	1	9118107	1157
ENSMUSG00000118125	protein_coding	Gm50387	ENSMUST00000160852	nonsense_mediated_decay	principal1	19	-1	5731713	2532
ENSMUSG00000085396	processed_transcript	Firre	ENSMUST00000204974	processed_transcript		X	-1	50591959	3850
ENSMUSG00000020407	protein_coding	Upp1	ENSMUST00000170444	protein_coding		11	1	9118245	612
ENSMUSG00000040351	protein_coding	Ankib1	ENSMUST00000043551	protein_coding	principal1	5	-1	3802925	6426
ENSMUSG00000020407	protein_coding	Upp1	ENSMUST00000130522	protein_coding		11	1	9118548	621
ENSMUSG00000015932	protein_coding	Dstn	ENSMUST00000103172	protein_coding	principal1	2	1	143915320	1911
ENSMUSG00000024939	protein_coding	Fam89b	ENSMUST00000116558	protein_coding		19	-1	5729633	1189
ENSMUSG00000028591	protein_coding	Pramef12	ENSMUST00000030326	protein_coding	principal1	4	-1	144408464	2460
ENSMUSG00000020407	protein_coding	Upp1	ENSMUST00000168121	retained_intron		11	1	9118627	334
ENSMUSG00000085396	processed_transcript	Firre	ENSMUST00000203933	processed_transcript		X	-1	50635066	5555
ENSMUSG00000020407	protein_coding	Upp1	ENSMUST00000172452	protein_coding		11	1	9118787	518
ENSMUSG00000040351	protein_coding	Ankib1	ENSMUST00000199043	retained_intron		5	-1	3702132	639
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000197631	protein_coding		5	1	87666228	1359
ENSMUSG00000086923	processed_transcript	4930406D18Rik	ENSMUST00000147951	retained_intron		3	1	100426405	600
ENSMUSG00000040351	protein_coding	Ankib1	ENSMUST00000200335	protein_coding		5	-1	3795490	2572
ENSMUSG00000020407	protein_coding	Upp1	ENSMUST00000166455	protein_coding		11	1	9125683	430
ENSMUSG00000040351	protein_coding	Ankib1	ENSMUST00000198344	retained_intron		5	-1	3695229	429
ENSMUSG00000028591	protein_coding	Pramef12	ENSMUST00000123854	protein_coding		4	-1	144408417	601
ENSMUSG00000103609	TEC	Gm37022	ENSMUST00000192517	TEC		1	1	86638201	2254
ENSMUSG00000020407	protein_coding	Upp1	ENSMUST00000146696	retained_intron		11	1	9133015	813
ENSMUSG00000040351	protein_coding	Ankib1	ENSMUST00000200052	retained_intron		5	-1	3701869	1319
ENSMUSG00000085396	processed_transcript	Firre	ENSMUST00000143999	processed_transcript		X	-1	50635321	720
ENSMUSG00000048240	protein_coding	Gng7	ENSMUST00000117805	protein_coding	alternative1	10	-1	81014945	3382
ENSMUSG00000086923	processed_transcript	4930406D18Rik	ENSMUST00000152827	lincRNA		3	1	100426439	657
ENSMUSG00000020407	protein_coding	Upp1	ENSMUST00000164791	protein_coding	principal1	11	1	9118507	1252
ENSMUSG00000085396	processed_transcript	Firre	ENSMUST00000136518	processed_transcript		X	-1	50635311	715
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000094641	protein_coding	principal1	5	1	87666233	1411
ENSMUSG00000106639	lincRNA	Gm43121	ENSMUST00000199065	lincRNA		3	1	100437834	1305
ENSMUSG00000114043	processed_pseudogene	Gm48625	ENSMUST00000223138	processed_pseudogene		12	1	19598710	148
ENSMUSG00000085396	processed_transcript	Firre	ENSMUST00000148530	processed_transcript		X	-1	50635303	716
ENSMUSG00000024939	protein_coding	Fam89b	ENSMUST00000099955	protein_coding	principal1	19	-1	5729651	1197
ENSMUSG00000048240	protein_coding	Gng7	ENSMUST00000118233	protein_coding	alternative1	10	-1	81001378	3433
ENSMUSG00000040351	protein_coding	Ankib1	ENSMUST00000199763	retained_intron		5	-1	3802787	1569
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000197911	processed_transcript		5	1	87666847	627
ENSMUSG00000105950	TEC	Gm43679	ENSMUST00000197051	TEC		5	-1	3755577	3677
ENSMUSG00000044468	protein_coding	Tent5c	ENSMUST00000128107	processed_transcript		3	-1	100489198	460
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000196380	retained_intron		5	1	87667233	349
ENSMUSG00000064080	protein_coding	Fbln2	ENSMUST00000113498	protein_coding		6	1	91212455	4644
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000197157	nonsense_mediated_decay		5	1	87671003	721
ENSMUSG00000048240	protein_coding	Gng7	ENSMUST00000118465	protein_coding	alternative1	10	-1	80998190	875
ENSMUSG00000044468	protein_coding	Tent5c	ENSMUST00000139833	processed_transcript		3	-1	100489194	555
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000198293	retained_intron		5	1	87671514	288
ENSMUSG00000091811	protein_coding	Inafm1	ENSMUST00000169612	protein_coding	principal1	7	-1	16273617	1605
ENSMUSG00000048240	protein_coding	Gng7	ENSMUST00000126317	protein_coding		10	-1	81014913	374
ENSMUSG00000048240	protein_coding	Gng7	ENSMUST00000092285	protein_coding	principal2	10	-1	81014925	3362
ENSMUSG00000055415	protein_coding	Atp10b	ENSMUST00000077659	protein_coding	principal2	11	1	43151599	6825
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000197794	retained_intron		5	1	87677286	444
ENSMUSG00000055415	protein_coding	Atp10b	ENSMUST00000238415	protein_coding	alternative2	11	1	43155671	6949
ENSMUSG00000048240	protein_coding	Gng7	ENSMUST00000099462	protein_coding	principal2	10	-1	81001365	3425
ENSMUSG00000113957	unprocessed_pseudogene	Gm9257	ENSMUST00000221254	unprocessed_pseudogene		12	1	19606929	232
ENSMUSG00000113714	processed_pseudogene	Gm48635	ENSMUST00000221889	processed_pseudogene		12	1	19658046	389
ENSMUSG00000032766	protein_coding	Gng11	ENSMUST00000031670	protein_coding	principal1	6	1	4003904	919
ENSMUSG00000114164	processed_pseudogene	Gm48636	ENSMUST00000222935	processed_pseudogene		12	1	19704294	274
ENSMUSG00000064080	protein_coding	Fbln2	ENSMUST00000041544	protein_coding	principal1	6	1	91212455	4786
ENSMUSG00000114002	processed_pseudogene	Gm48637	ENSMUST00000221803	processed_pseudogene		12	-1	19729143	109
ENSMUSG00000024939	protein_coding	Fam89b	ENSMUST00000161368	protein_coding		19	-1	5729653	1160
ENSMUSG00000107681	lincRNA	4930528H21Rik	ENSMUST00000204264	lincRNA		6	-1	4047585	495
ENSMUSG00000111200	lincRNA	Gm33728	ENSMUST00000217285	lincRNA		10	-1	21252114	546
ENSMUSG00000064080	protein_coding	Fbln2	ENSMUST00000153364	protein_coding		6	1	91212822	223
ENSMUSG00000114173	processed_pseudogene	Gm48638	ENSMUST00000220750	processed_pseudogene		12	-1	19749882	150
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000198432	retained_intron		5	1	87677599	1033
ENSMUSG00000068240	protein_coding	Gm11808	ENSMUST00000089430	protein_coding	principal1	4	-1	3973595	504
ENSMUSG00000044468	protein_coding	Tent5c	ENSMUST00000061455	protein_coding	principal1	3	-1	100489324	5640
ENSMUSG00000114096	processed_pseudogene	Gm48641	ENSMUST00000223436	processed_pseudogene		12	-1	19817367	400
ENSMUSG00000064080	protein_coding	Fbln2	ENSMUST00000132021	protein_coding		6	1	91212824	477
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000199533	retained_intron		5	1	87678748	791
ENSMUSG00000082966	processed_pseudogene	Gm14614	ENSMUST00000119873	processed_pseudogene		X	-1	41686377	384
ENSMUSG00000064080	protein_coding	Fbln2	ENSMUST00000203406	processed_transcript		6	1	91212827	669
ENSMUSG00000070702	protein_coding	Csn1s1	ENSMUST00000197788	retained_intron		5	1	87680529	1530
ENSMUSG00000064080	protein_coding	Fbln2	ENSMUST00000134974	protein_coding		6	1	91212831	377
ENSMUSG00000085591	lincRNA	Gm13479	ENSMUST00000130773	lincRNA		2	1	45357265	4722
ENSMUSG00000083510	processed_pseudogene	Gm13478	ENSMUST00000118312	processed_pseudogene		2	1	45647191	413
ENSMUSG00000064080	protein_coding	Fbln2	ENSMUST00000147371	retained_intron		6	1	91256001	660
ENSMUSG00000086202	lincRNA	1700019E08Rik	ENSMUST00000153567	lincRNA		2	1	45696605	635
ENSMUSG00000064080	protein_coding	Fbln2	ENSMUST00000134286	retained_intron		6	1	91256404	752
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000122058	protein_coding	alternative2	17	1	26202958	2005
ENSMUSG00000086202	lincRNA	1700019E08Rik	ENSMUST00000134308	lincRNA		2	1	45696800	424
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000126464	retained_intron		17	1	26202963	386
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000140738	protein_coding		17	-1	25785540	1194
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000152299	retained_intron		17	1	26202965	353
ENSMUSG00000064080	protein_coding	Fbln2	ENSMUST00000137029	retained_intron		6	1	91265879	1612
ENSMUSG00000032757	protein_coding	Bet1	ENSMUST00000049166	protein_coding	principal1	6	-1	4086972	1516
ENSMUSG00000032757	protein_coding	Bet1	ENSMUST00000203612	processed_transcript		6	-1	4086919	518
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000133071	protein_coding		17	-1	25785582	1128
ENSMUSG00000032757	protein_coding	Bet1	ENSMUST00000204806	retained_intron		6	-1	4080091	295
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000147220	retained_intron		17	1	26202976	2703
ENSMUSG00000032757	protein_coding	Bet1	ENSMUST00000150319	retained_intron		6	-1	4086972	2461
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000146683	retained_intron		17	1	26202980	690
ENSMUSG00000033022	protein_coding	Cdo1	ENSMUST00000035804	protein_coding	principal1	18	-1	46728395	1595
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000127594	retained_intron		17	1	26203002	2377
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000077938	protein_coding	principal1	17	-1	25785673	1405
ENSMUSG00000033022	protein_coding	Cdo1	ENSMUST00000234819	protein_coding		18	-1	46728355	1466
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000123670	retained_intron		17	1	26203012	832
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000155072	retained_intron		17	1	26207454	1331
ENSMUSG00000033022	protein_coding	Cdo1	ENSMUST00000234064	nonsense_mediated_decay		18	-1	46728340	857
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000139639	retained_intron		17	1	26207842	1241
ENSMUSG00000032757	protein_coding	Bet1	ENSMUST00000145696	processed_transcript		6	-1	4086930	420
ENSMUSG00000032757	protein_coding	Bet1	ENSMUST00000205191	processed_transcript		6	-1	4086930	394
ENSMUSG00000033022	protein_coding	Cdo1	ENSMUST00000234179	protein_coding		18	-1	46728029	427
ENSMUSG00000082991	processed_pseudogene	Rps10-ps3	ENSMUST00000122317	processed_pseudogene		4	-1	3978750	500
ENSMUSG00000024186	protein_coding	Rgs11	ENSMUST00000025020	protein_coding	principal2	17	1	26202962	2006
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000029700	protein_coding	principal1	3	-1	88455739	3205
ENSMUSG00000010796	protein_coding	Asz1	ENSMUST00000010940	protein_coding	principal1	6	-1	18109057	1736
ENSMUSG00000033022	protein_coding	Cdo1	ENSMUST00000234222	nonsense_mediated_decay		18	-1	46728354	611
ENSMUSG00000040054	protein_coding	Baz2a	ENSMUST00000238829	protein_coding	alternative2	10	1	128091582	8411
ENSMUSG00000038181	protein_coding	Chpf2	ENSMUST00000088295	protein_coding	principal1	5	1	24586741	5371
ENSMUSG00000027177	protein_coding	Hipk3	ENSMUST00000028600	protein_coding	principal2	2	-1	104494446	7454
ENSMUSG00000026153	protein_coding	Fam135a	ENSMUST00000187752	protein_coding	alternative2	1	-1	24100194	5194
ENSMUSG00000038181	protein_coding	Chpf2	ENSMUST00000198521	processed_transcript		5	1	24586742	459
ENSMUSG00000010796	protein_coding	Asz1	ENSMUST00000136626	retained_intron		6	-1	18109044	2345
ENSMUSG00000040054	protein_coding	Baz2a	ENSMUST00000217851	protein_coding	alternative2	10	1	128091610	8385
ENSMUSG00000026153	protein_coding	Fam135a	ENSMUST00000187369	protein_coding	alternative2	1	-1	24100182	4976
ENSMUSG00000010796	protein_coding	Asz1	ENSMUST00000146216	retained_intron		6	-1	18075107	297
ENSMUSG00000038181	protein_coding	Chpf2	ENSMUST00000197566	processed_transcript		5	1	24586772	529
ENSMUSG00000040054	protein_coding	Baz2a	ENSMUST00000219082	retained_intron		10	1	128091613	1782
ENSMUSG00000027177	protein_coding	Hipk3	ENSMUST00000111124	protein_coding	principal2	2	-1	104493690	4125
ENSMUSG00000010796	protein_coding	Asz1	ENSMUST00000136194	nonsense_mediated_decay		6	-1	18109045	694
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000156108	retained_intron		3	-1	88441139	2108
ENSMUSG00000026153	protein_coding	Fam135a	ENSMUST00000186331	nonsense_mediated_decay		1	-1	24029086	2564
ENSMUSG00000038181	protein_coding	Chpf2	ENSMUST00000197318	protein_coding		5	1	24586825	494
ENSMUSG00000010796	protein_coding	Asz1	ENSMUST00000131614	processed_transcript		6	-1	18109061	667
ENSMUSG00000027177	protein_coding	Hipk3	ENSMUST00000111125	protein_coding	alternative1	2	-1	104493954	3651
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000135539	retained_intron		3	-1	88448630	2487
ENSMUSG00000038181	protein_coding	Chpf2	ENSMUST00000197933	processed_transcript		5	1	24593487	404
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000149145	retained_intron		3	-1	88450038	2357
ENSMUSG00000058325	protein_coding	Dock1	ENSMUST00000211593	protein_coding		7	1	134670687	2589
ENSMUSG00000038181	protein_coding	Chpf2	ENSMUST00000121863	protein_coding	principal1	5	1	24586750	3715
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000025752	protein_coding	principal1	19	-1	5964202	2421
ENSMUSG00000027177	protein_coding	Hipk3	ENSMUST00000132622	processed_transcript		2	-1	104439252	848
ENSMUSG00000100716	lincRNA	Gm28550	ENSMUST00000190596	lincRNA		Y	-1	46912390	433
ENSMUSG00000102918	protein_coding	Pcdhgc3	ENSMUST00000076807	protein_coding	principal1	18	1	37806410	4687
ENSMUSG00000100716	lincRNA	Gm28550	ENSMUST00000189125	lincRNA		Y	-1	46912390	618
ENSMUSG00000026153	protein_coding	Fam135a	ENSMUST00000027337	protein_coding	principal2	1	-1	24100333	5536
ENSMUSG00000102918	protein_coding	Pcdhgc3	ENSMUST00000192103	nonsense_mediated_decay		18	1	37806416	3588
ENSMUSG00000040054	protein_coding	Baz2a	ENSMUST00000220049	protein_coding	principal2	10	1	128091635	8443
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000237735	retained_intron		19	-1	5942719	618
ENSMUSG00000026153	protein_coding	Fam135a	ENSMUST00000185807	protein_coding		1	-1	24028450	483
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000165143	protein_coding		19	-1	5964202	2391
ENSMUSG00000048620	protein_coding	Olfr1336	ENSMUST00000214301	protein_coding	principal1	7	1	6456168	6882
ENSMUSG00000103567	protein_coding	Pcdhga5	ENSMUST00000193414	protein_coding	principal1	18	1	37694380	4664
ENSMUSG00000026153	protein_coding	Fam135a	ENSMUST00000186999	protein_coding		1	-1	24100216	2931
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000235535	protein_coding		19	-1	5953862	1477
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000106080	protein_coding	principal3	4	1	128688795	3885
ENSMUSG00000040054	protein_coding	Baz2a	ENSMUST00000219072	protein_coding		10	1	128092783	2446
ENSMUSG00000103125	protein_coding	Gm37388	ENSMUST00000193984	protein_coding	principal1	18	1	36975941	429
ENSMUSG00000048620	protein_coding	Olfr1336	ENSMUST00000056120	protein_coding	principal1	7	1	6460511	945
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000236089	retained_intron		19	-1	5943868	481
ENSMUSG00000100325	lincRNA	Gm28604	ENSMUST00000188638	lincRNA		Y	-1	46935365	174
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000155653	retained_intron		4	1	128710164	2798
ENSMUSG00000100325	lincRNA	Gm28604	ENSMUST00000186629	lincRNA		Y	-1	46935365	484
ENSMUSG00000040054	protein_coding	Baz2a	ENSMUST00000219980	retained_intron		10	1	128096380	2455
ENSMUSG00000040054	protein_coding	Baz2a	ENSMUST00000045621	protein_coding	principal2	10	1	128092783	8369
ENSMUSG00000023914	protein_coding	Mep1a	ENSMUST00000117137	protein_coding	alternative2	17	-1	43502812	2967
ENSMUSG00000073433	protein_coding	Arhgdig	ENSMUST00000025019	protein_coding	principal1	17	-1	26201350	1032
ENSMUSG00000078813	protein_coding	Leng1	ENSMUST00000019878	protein_coding	principal1	7	-1	3665840	2222
ENSMUSG00000038216	protein_coding	Pnmt	ENSMUST00000041301	protein_coding	principal1	11	1	98386450	1154
ENSMUSG00000040054	protein_coding	Baz2a	ENSMUST00000170054	protein_coding	alternative2	10	1	128092783	8372
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000235790	retained_intron		19	-1	5949006	891
ENSMUSG00000023914	protein_coding	Mep1a	ENSMUST00000130964	processed_transcript		17	-1	43500482	356
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000129917	retained_intron		17	-1	25785335	1790
ENSMUSG00000026153	protein_coding	Fam135a	ENSMUST00000185525	retained_intron		1	-1	24100341	2654
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000107531	protein_coding		3	-1	88455697	2897
ENSMUSG00000023914	protein_coding	Mep1a	ENSMUST00000152155	retained_intron		17	-1	43502733	403
ENSMUSG00000038216	protein_coding	Pnmt	ENSMUST00000124527	processed_transcript		11	1	98386712	245
ENSMUSG00000112979	processed_pseudogene	Gm8634	ENSMUST00000222547	processed_pseudogene		12	1	88302813	1367
ENSMUSG00000114020	processed_pseudogene	Gm48564	ENSMUST00000222179	processed_pseudogene		12	-1	88308447	408
ENSMUSG00000113829	processed_pseudogene	Gm18619	ENSMUST00000222722	processed_pseudogene		12	-1	88318674	1147
ENSMUSG00000073433	protein_coding	Arhgdig	ENSMUST00000121959	protein_coding		17	-1	26201369	1029
ENSMUSG00000023914	protein_coding	Mep1a	ENSMUST00000024707	protein_coding	principal2	17	-1	43502773	2921
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000143632	nonsense_mediated_decay		4	1	128727581	2417
ENSMUSG00000037735	lincRNA	2810032G03Rik	ENSMUST00000037953	lincRNA		12	1	5375870	2063
ENSMUSG00000093847	protein_coding	Gm5039	ENSMUST00000218054	protein_coding	principal1	12	-1	88324026	1856
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000185137	nonsense_mediated_decay		3	-1	88451450	699
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000137587	retained_intron		17	-1	25785532	1453
ENSMUSG00000093847	protein_coding	Gm5039	ENSMUST00000177747	protein_coding	principal1	12	-1	88321481	435
ENSMUSG00000037735	lincRNA	2810032G03Rik	ENSMUST00000163627	lincRNA		12	1	5411641	2514
ENSMUSG00000073433	protein_coding	Arhgdig	ENSMUST00000176847	processed_transcript		17	-1	26207786	736
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000135732	retained_intron		3	-1	88451786	713
ENSMUSG00000113583	unprocessed_pseudogene	Gm10264	ENSMUST00000220589	unprocessed_pseudogene		12	1	88329254	429
ENSMUSG00000100048	unprocessed_pseudogene	Gm28603	ENSMUST00000187297	unprocessed_pseudogene		Y	1	46970283	696
ENSMUSG00000073433	protein_coding	Arhgdig	ENSMUST00000155556	retained_intron		17	-1	26201144	796
ENSMUSG00000107981	processed_pseudogene	Gm6064	ENSMUST00000203999	processed_pseudogene		6	-1	107094115	454
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000184487	nonsense_mediated_decay		3	-1	88455314	866
ENSMUSG00000113942	processed_pseudogene	Gm18632	ENSMUST00000222597	processed_pseudogene		12	1	88331039	2087
ENSMUSG00000115811	antisense	Gm41293	ENSMUST00000227302	antisense		15	-1	36210705	707
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000138759	protein_coding		17	-1	25785567	1074
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000127436	protein_coding		3	-1	88459101	845
ENSMUSG00000113617	processed_pseudogene	Gm8655	ENSMUST00000221159	processed_pseudogene		12	1	88334624	852
ENSMUSG00000046139	protein_coding	Patl1	ENSMUST00000061618	protein_coding	principal1	19	1	11912399	4216
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000184876	nonsense_mediated_decay		3	-1	88459030	748
ENSMUSG00000054938	protein_coding	Olfr1346	ENSMUST00000207658	protein_coding	principal1	7	1	6467101	4429
ENSMUSG00000107714	lincRNA	Gm34933	ENSMUST00000203245	lincRNA		6	-1	107276738	1067
ENSMUSG00000054938	protein_coding	Olfr1346	ENSMUST00000215302	protein_coding	principal1	7	1	6467101	4525
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000147200	protein_coding		3	-1	88458876	706
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000106079	protein_coding	alternative2	4	1	128727585	2535
ENSMUSG00000028949	protein_coding	Smarcd3	ENSMUST00000144995	retained_intron		5	-1	24601976	3774
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000125526	protein_coding		3	-1	88455305	506
ENSMUSG00000054938	protein_coding	Olfr1346	ENSMUST00000056144	protein_coding	principal1	7	1	6474088	1051
ENSMUSG00000046139	protein_coding	Patl1	ENSMUST00000238190	nonsense_mediated_decay		19	1	11912443	3158
ENSMUSG00000052144	protein_coding	Ppp4r2	ENSMUST00000063854	protein_coding	principal1	6	1	100833622	4874
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000138445	nonsense_mediated_decay		4	1	128727682	894
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000184972	retained_intron		3	-1	88454842	465
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000133439	protein_coding		4	1	128727710	484
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000141471	protein_coding		3	-1	88456415	630
ENSMUSG00000097977	processed_pseudogene	Gm5652	ENSMUST00000182336	processed_pseudogene		12	-1	5590624	1008
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000150324	protein_coding	principal1	17	-1	25785338	1267
ENSMUSG00000037617	protein_coding	Spag1	ENSMUST00000227623	protein_coding		15	1	36178099	739
ENSMUSG00000112559	processed_pseudogene	Gm48599	ENSMUST00000219669	processed_pseudogene		12	-1	5591532	329
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000147572	protein_coding		4	1	128727933	924
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000148986	retained_intron		17	-1	25785567	848
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000120946	protein_coding		4	1	128727971	438
ENSMUSG00000062031	protein_coding	Pgghg	ENSMUST00000164337	processed_transcript		7	1	140941391	2748
ENSMUSG00000052144	protein_coding	Ppp4r2	ENSMUST00000204001	retained_intron		6	1	100852485	2560
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000143248	retained_intron		17	-1	25785566	951
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000134421	protein_coding		4	1	128727982	620
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000123753	protein_coding		3	-1	88456436	385
ENSMUSG00000052144	protein_coding	Ppp4r2	ENSMUST00000203940	protein_coding		6	1	100852536	685
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000138100	retained_intron		17	-1	25785305	721
ENSMUSG00000028796	protein_coding	Phc2	ENSMUST00000030588	protein_coding	principal3	4	1	128654702	3949
ENSMUSG00000099789	lincRNA	Gm28565	ENSMUST00000186615	lincRNA		Y	1	47252167	537
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000146921	processed_transcript		3	-1	88456436	371
ENSMUSG00000099789	lincRNA	Gm28565	ENSMUST00000185875	lincRNA		Y	1	47252167	352
ENSMUSG00000052144	protein_coding	Ppp4r2	ENSMUST00000203580	protein_coding		6	1	100852577	1948
ENSMUSG00000061046	protein_coding	Haghl	ENSMUST00000145053	protein_coding		17	-1	25785543	686
ENSMUSG00000099593	lincRNA	Gm28566	ENSMUST00000186714	lincRNA		Y	1	47291729	484
ENSMUSG00000027680	protein_coding	Fxr1	ENSMUST00000001620	protein_coding	principal1	3	1	34019943	2459
ENSMUSG00000052144	protein_coding	Ppp4r2	ENSMUST00000203067	retained_intron		6	1	100866126	598
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000166237	protein_coding	principal1	3	-1	88461182	3046
ENSMUSG00000099593	lincRNA	Gm28566	ENSMUST00000189532	lincRNA		Y	1	47291729	174
ENSMUSG00000070985	protein_coding	Acnat1	ENSMUST00000095086	protein_coding	principal2	4	-1	49451137	1499
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000165898	protein_coding	principal1	3	-1	88459101	3125
ENSMUSG00000107177	TEC	Gm43845	ENSMUST00000202462	TEC		6	-1	18111961	1820
ENSMUSG00000028064	protein_coding	Sema4a	ENSMUST00000169222	protein_coding	principal1	3	-1	88458884	3084
ENSMUSG00000070985	protein_coding	Acnat1	ENSMUST00000107697	protein_coding	alternative2	4	-1	49451134	1446
ENSMUSG00000097328	protein_coding	Tnfsf12	ENSMUST00000181810	protein_coding	principal1	11	-1	69695849	1435
ENSMUSG00000053226	protein_coding	Dand5	ENSMUST00000065539	protein_coding	principal1	8	-1	84822823	1585
ENSMUSG00000096228	protein_coding	Olfr5	ENSMUST00000209866	protein_coding	principal1	7	-1	6486941	2980
ENSMUSG00000070985	protein_coding	Acnat1	ENSMUST00000135976	protein_coding		4	-1	49473912	534
ENSMUSG00000036940	protein_coding	Kdm1a	ENSMUST00000116273	protein_coding	principal3	4	-1	136602723	3008
ENSMUSG00000097328	protein_coding	Tnfsf12	ENSMUST00000181261	protein_coding		11	-1	69695521	331
ENSMUSG00000070985	protein_coding	Acnat1	ENSMUST00000150392	processed_transcript		4	-1	49473879	502
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000238075	retained_intron		19	-1	5964169	1703
ENSMUSG00000053226	protein_coding	Dand5	ENSMUST00000238279	processed_transcript		8	-1	84832409	1369
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000236013	protein_coding		19	-1	5952184	656
ENSMUSG00000096228	protein_coding	Olfr5	ENSMUST00000086318	protein_coding	principal1	7	-1	6486813	1044
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000236176	retained_intron		19	-1	5964152	2501
ENSMUSG00000084203	processed_pseudogene	Gm15593	ENSMUST00000122085	processed_pseudogene		6	1	18144734	1008
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000237136	retained_intron		19	-1	5964169	2483
ENSMUSG00000036940	protein_coding	Kdm1a	ENSMUST00000105847	protein_coding	alternative2	4	-1	136602687	3028
ENSMUSG00000117899	antisense	Gm50218	ENSMUST00000237537	antisense		17	1	31247303	755
ENSMUSG00000033751	protein_coding	Gadd45gip1	ENSMUST00000036734	protein_coding	principal1	8	1	84831522	2494
ENSMUSG00000117899	antisense	Gm50218	ENSMUST00000235624	antisense		17	1	31247359	837
ENSMUSG00000117899	antisense	Gm50218	ENSMUST00000237156	antisense		17	1	31247664	440
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000235224	protein_coding		19	-1	5964164	886
ENSMUSG00000101109	lincRNA	Gm28697	ENSMUST00000188821	lincRNA		Y	1	47314562	622
ENSMUSG00000036940	protein_coding	Kdm1a	ENSMUST00000046846	protein_coding		4	-1	136602308	2051
ENSMUSG00000101109	lincRNA	Gm28697	ENSMUST00000187693	lincRNA		Y	1	47314562	437
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000235426	processed_transcript		19	-1	5964148	889
ENSMUSG00000036940	protein_coding	Kdm1a	ENSMUST00000171424	retained_intron		4	-1	136552542	828
ENSMUSG00000082289	processed_pseudogene	Gm15596	ENSMUST00000121139	processed_pseudogene		6	-1	18157120	784
ENSMUSG00000024833	protein_coding	Pola2	ENSMUST00000238043	retained_intron		19	-1	5964163	2878
ENSMUSG00000036940	protein_coding	Kdm1a	ENSMUST00000139690	retained_intron		4	-1	136553172	858
ENSMUSG00000113181	processed_pseudogene	Gm47954	ENSMUST00000222014	processed_pseudogene		12	-1	40225782	520
ENSMUSG00000101541	lincRNA	Gm28554	ENSMUST00000189175	lincRNA		Y	1	47357940	484
ENSMUSG00000113038	lincRNA	Gm48491	ENSMUST00000222297	lincRNA		13	-1	16277838	580
ENSMUSG00000090582	sense_intronic	Gm17024	ENSMUST00000165676	sense_intronic		12	-1	40211073	634
ENSMUSG00000036940	protein_coding	Kdm1a	ENSMUST00000125111	retained_intron		4	-1	136555324	1130
ENSMUSG00000101541	lincRNA	Gm28554	ENSMUST00000187964	lincRNA		Y	1	47357940	174
ENSMUSG00000045776	protein_coding	Lrtm1	ENSMUST00000055662	protein_coding	principal2	14	1	29018208	7321
ENSMUSG00000021038	protein_coding	Vipas39	ENSMUST00000220858	retained_intron		12	-1	87242719	1398
ENSMUSG00000035983	antisense	Gm7008	ENSMUST00000038121	antisense		12	1	40222758	1366
ENSMUSG00000036940	protein_coding	Kdm1a	ENSMUST00000147886	retained_intron		4	-1	136561501	995
ENSMUSG00000045776	protein_coding	Lrtm1	ENSMUST00000224760	protein_coding		14	1	29018504	3060
ENSMUSG00000045776	protein_coding	Lrtm1	ENSMUST00000224708	protein_coding	alternative2	14	1	29020872	1646
ENSMUSG00000114704	antisense	Gm48003	ENSMUST00000225295	antisense		14	1	29574697	660
ENSMUSG00000114704	antisense	Gm48003	ENSMUST00000224352	antisense		14	1	29574697	645
ENSMUSG00000036940	protein_coding	Kdm1a	ENSMUST00000155354	protein_coding		4	-1	136568607	751
ENSMUSG00000036940	protein_coding	Kdm1a	ENSMUST00000170979	protein_coding		4	-1	136577158	965
ENSMUSG00000035983	antisense	Gm7008	ENSMUST00000170019	antisense		12	1	40223364	402
ENSMUSG00000075245	processed_pseudogene	Gm6043	ENSMUST00000099961	processed_pseudogene		14	1	29217639	492
ENSMUSG00000027680	protein_coding	Fxr1	ENSMUST00000167354	protein_coding		3	1	34020098	1986
ENSMUSG00000035983	antisense	Gm7008	ENSMUST00000171356	antisense		12	1	40223429	476
ENSMUSG00000114760	antisense	Gm48006	ENSMUST00000223940	antisense		14	1	29235227	588
ENSMUSG00000114595	antisense	Gm48004	ENSMUST00000225160	antisense		14	1	29081302	1327
ENSMUSG00000103310	protein_coding	Pcdha12	ENSMUST00000047614	protein_coding	principal1	18	1	37020149	5335
ENSMUSG00000033219	protein_coding	Gm9758	ENSMUST00000035980	protein_coding	principal1	5	-1	14914899	1167
ENSMUSG00000027680	protein_coding	Fxr1	ENSMUST00000200086	nonsense_mediated_decay		3	1	34020098	2158
ENSMUSG00000003813	protein_coding	Rad23a	ENSMUST00000144675	protein_coding		8	-1	84838047	725
ENSMUSG00000027680	protein_coding	Fxr1	ENSMUST00000198051	protein_coding		3	1	34020105	2127
ENSMUSG00000033219	protein_coding	Gm9758	ENSMUST00000154544	retained_intron		5	-1	14914853	440
ENSMUSG00000027680	protein_coding	Fxr1	ENSMUST00000197694	protein_coding		3	1	34020108	2129
ENSMUSG00000034583	protein_coding	Olfr1347	ENSMUST00000218572	processed_transcript		7	-1	6499755	1203
ENSMUSG00000034583	protein_coding	Olfr1347	ENSMUST00000207339	protein_coding	principal1	7	-1	6499755	1737
ENSMUSG00000039450	protein_coding	Dcxr	ENSMUST00000106148	protein_coding		11	-1	120727243	830
ENSMUSG00000027680	protein_coding	Fxr1	ENSMUST00000200392	protein_coding		3	1	34020108	3014
ENSMUSG00000034583	protein_coding	Olfr1347	ENSMUST00000036357	protein_coding	principal1	7	-1	6488876	964
ENSMUSG00000027680	protein_coding	Fxr1	ENSMUST00000196519	retained_intron		3	1	34039531	651
ENSMUSG00000034583	protein_coding	Olfr1347	ENSMUST00000209055	protein_coding		7	-1	6499648	392
ENSMUSG00000034583	protein_coding	Olfr1347	ENSMUST00000220413	protein_coding		7	-1	6488876	964
ENSMUSG00000028949	protein_coding	Smarcd3	ENSMUST00000030791	protein_coding	principal1	5	-1	24602012	1735
ENSMUSG00000027680	protein_coding	Fxr1	ENSMUST00000197853	protein_coding		3	1	34039534	646
ENSMUSG00000027680	protein_coding	Fxr1	ENSMUST00000200425	retained_intron		3	1	34046632	2484
ENSMUSG00000006289	protein_coding	Osgep	ENSMUST00000160393	nonsense_mediated_decay		14	-1	50924834	2004
ENSMUSG00000044322	protein_coding	Dsc1	ENSMUST00000224432	protein_coding	alternative2	18	-1	20114610	4085
ENSMUSG00000028949	protein_coding	Smarcd3	ENSMUST00000195943	protein_coding		5	-1	24624411	1712
ENSMUSG00000028949	protein_coding	Smarcd3	ENSMUST00000147857	retained_intron		5	-1	24596849	786
ENSMUSG00000094782	protein_coding	Gm21256	ENSMUST00000188881	protein_coding	principal1	Y	1	47450960	932
ENSMUSG00000094782	protein_coding	Gm21256	ENSMUST00000179672	protein_coding		Y	1	47452394	498
ENSMUSG00000039450	protein_coding	Dcxr	ENSMUST00000026144	protein_coding	principal1	11	-1	120727281	892
ENSMUSG00000028949	protein_coding	Smarcd3	ENSMUST00000143501	retained_intron		5	-1	24601935	1070
ENSMUSG00000028949	protein_coding	Smarcd3	ENSMUST00000145565	retained_intron		5	-1	24598938	624
ENSMUSG00000100852	lincRNA	Gm29056	ENSMUST00000187933	lincRNA		Y	1	47544772	1493
ENSMUSG00000006289	protein_coding	Osgep	ENSMUST00000159292	protein_coding	principal1	14	-1	50924893	3388
ENSMUSG00000003813	protein_coding	Rad23a	ENSMUST00000003911	protein_coding	principal3	8	-1	84840641	2074
ENSMUSG00000028949	protein_coding	Smarcd3	ENSMUST00000144518	retained_intron		5	-1	24596989	406
ENSMUSG00000100852	lincRNA	Gm29056	ENSMUST00000188889	lincRNA		Y	1	47545225	431
ENSMUSG00000028949	protein_coding	Smarcd3	ENSMUST00000140744	retained_intron		5	-1	24601900	583
ENSMUSG00000044322	protein_coding	Dsc1	ENSMUST00000038710	protein_coding	principal2	18	-1	20114773	3775
ENSMUSG00000028949	protein_coding	Smarcd3	ENSMUST00000199393	processed_transcript		5	-1	24623136	510
ENSMUSG00000098102	processed_pseudogene	Gm2467	ENSMUST00000182266	processed_pseudogene		10	1	21289219	1010
ENSMUSG00000003813	protein_coding	Rad23a	ENSMUST00000109761	protein_coding	alternative1	8	-1	84840665	1842
ENSMUSG00000019734	protein_coding	Tmc4	ENSMUST00000038743	protein_coding	principal2	7	-1	3677553	2310
ENSMUSG00000003813	protein_coding	Rad23a	ENSMUST00000128035	protein_coding		8	-1	84840665	1068
ENSMUSG00000044322	protein_coding	Dsc1	ENSMUST00000224557	retained_intron		18	-1	20114657	2872
ENSMUSG00000113332	unprocessed_pseudogene	Gm9259	ENSMUST00000223533	unprocessed_pseudogene		12	-1	19830372	575
ENSMUSG00000019734	protein_coding	Tmc4	ENSMUST00000145034	protein_coding		7	-1	3666883	455
ENSMUSG00000113411	processed_pseudogene	Gm48643	ENSMUST00000223086	processed_pseudogene		12	-1	19865495	370
ENSMUSG00000044322	protein_coding	Dsc1	ENSMUST00000226115	protein_coding		18	-1	20114871	663
ENSMUSG00000039450	protein_coding	Dcxr	ENSMUST00000125242	retained_intron		11	-1	120727244	910
ENSMUSG00000091255	protein_coding	Speer4e	ENSMUST00000159973	protein_coding	principal1	5	-1	14938429	1603
ENSMUSG00000019734	protein_coding	Tmc4	ENSMUST00000121743	protein_coding	alternative2	7	-1	3676793	2204
ENSMUSG00000113077	processed_pseudogene	Gm49379	ENSMUST00000221362	processed_pseudogene		12	-1	19882320	167
ENSMUSG00000089669	protein_coding	Tnfsf13	ENSMUST00000018896	protein_coding	principal2	11	-1	69685554	1407
ENSMUSG00000103442	protein_coding	Pcdha1	ENSMUST00000193839	protein_coding	alternative2	18	1	36930184	4925
ENSMUSG00000101201	unprocessed_pseudogene	Gm28125	ENSMUST00000188470	unprocessed_pseudogene		Y	-1	82126556	615
ENSMUSG00000003813	protein_coding	Rad23a	ENSMUST00000134395	retained_intron		8	-1	84838666	411
ENSMUSG00000058325	protein_coding	Dock1	ENSMUST00000084488	protein_coding	principal1	7	1	134670687	6807
ENSMUSG00000113122	unprocessed_pseudogene	Gm48644	ENSMUST00000221262	unprocessed_pseudogene		12	-1	19950922	170
ENSMUSG00000039450	protein_coding	Dcxr	ENSMUST00000122883	processed_transcript		11	-1	120727229	914
ENSMUSG00000006289	protein_coding	Osgep	ENSMUST00000006452	nonsense_mediated_decay		14	-1	50924830	1308
ENSMUSG00000100438	unprocessed_pseudogene	Gm21825	ENSMUST00000185728	unprocessed_pseudogene		Y	-1	82163432	696
ENSMUSG00000089669	protein_coding	Tnfsf13	ENSMUST00000108648	protein_coding	alternative2	11	-1	69685784	1503
ENSMUSG00000019734	protein_coding	Tmc4	ENSMUST00000136678	retained_intron		7	-1	3670482	1529
ENSMUSG00000099532	lincRNA	Gm29098	ENSMUST00000186104	lincRNA		Y	1	47573714	1498
ENSMUSG00000003813	protein_coding	Rad23a	ENSMUST00000144994	retained_intron		8	-1	84838680	429
ENSMUSG00000101841	processed_pseudogene	Gm11993	ENSMUST00000121861	processed_pseudogene		11	-1	9150597	820
ENSMUSG00000112956	processed_pseudogene	Gm48645	ENSMUST00000221058	processed_pseudogene		12	-1	19968634	109
ENSMUSG00000058325	protein_coding	Dock1	ENSMUST00000210617	processed_transcript		7	1	134670691	3800
ENSMUSG00000099532	lincRNA	Gm29098	ENSMUST00000191313	lincRNA		Y	1	47574166	437
ENSMUSG00000003813	protein_coding	Rad23a	ENSMUST00000125711	retained_intron		8	-1	84840636	657
ENSMUSG00000001089	protein_coding	Luzp1	ENSMUST00000170102	protein_coding	principal1	4	1	136469761	7526
ENSMUSG00000062031	protein_coding	Pgghg	ENSMUST00000164580	protein_coding	alternative2	7	1	140941548	3001
ENSMUSG00000096140	protein_coding	Ankrd66	ENSMUST00000178772	protein_coding	principal1	17	-1	43543639	1307
ENSMUSG00000113376	processed_pseudogene	Gm48572	ENSMUST00000222555	processed_pseudogene		12	1	88338439	382
ENSMUSG00000113287	unprocessed_pseudogene	Gm40853	ENSMUST00000221342	unprocessed_pseudogene		12	1	20002777	582
ENSMUSG00000058325	protein_coding	Dock1	ENSMUST00000210464	retained_intron		7	1	134671122	2713
ENSMUSG00000107697	processed_pseudogene	Gm44399	ENSMUST00000205043	processed_pseudogene		6	-1	107346001	226
ENSMUSG00000058325	protein_coding	Dock1	ENSMUST00000210121	protein_coding		7	1	134777455	411
ENSMUSG00000006289	protein_coding	Osgep	ENSMUST00000162177	protein_coding		14	-1	50924688	1219
ENSMUSG00000113490	processed_pseudogene	Gm18620	ENSMUST00000222295	processed_pseudogene		12	-1	88340774	324
ENSMUSG00000062031	protein_coding	Pgghg	ENSMUST00000169736	retained_intron		7	1	140941566	3145
ENSMUSG00000025877	protein_coding	Hk3	ENSMUST00000052949	protein_coding	principal3	13	-1	55021385	3219
ENSMUSG00000109608	TEC	Gm45597	ENSMUST00000211524	TEC		7	-1	134911908	1994
ENSMUSG00000107674	processed_pseudogene	Gm44277	ENSMUST00000205128	processed_pseudogene		6	1	107503808	649
ENSMUSG00000062031	protein_coding	Pgghg	ENSMUST00000168084	processed_transcript		7	1	140941571	362
ENSMUSG00000118658	unprocessed_pseudogene	CT485612.1	ENSMUST00000239446	unprocessed_pseudogene		12	-1	88341959	166
ENSMUSG00000073805	protein_coding	Insyn2a	ENSMUST00000210055	processed_transcript		7	-1	134938305	3332
ENSMUSG00000019734	protein_coding	Tmc4	ENSMUST00000148313	retained_intron		7	-1	3676627	1406
ENSMUSG00000113826	processed_pseudogene	Gm48577	ENSMUST00000223014	processed_pseudogene		12	-1	88342689	151
ENSMUSG00000112404	lincRNA	Gm32442	ENSMUST00000219369	lincRNA		12	1	5808195	406
ENSMUSG00000025877	protein_coding	Hk3	ENSMUST00000153665	protein_coding	alternative2	13	-1	55021234	2945
ENSMUSG00000103442	protein_coding	Pcdha1	ENSMUST00000070797	protein_coding	principal2	18	1	36930285	5248
ENSMUSG00000112404	lincRNA	Gm32442	ENSMUST00000219593	lincRNA		12	1	5808210	544
ENSMUSG00000019734	protein_coding	Tmc4	ENSMUST00000144751	retained_intron		7	-1	3677524	2055
ENSMUSG00000062031	protein_coding	Pgghg	ENSMUST00000079403	protein_coding	principal2	7	1	140941581	2981
ENSMUSG00000006289	protein_coding	Osgep	ENSMUST00000160890	nonsense_mediated_decay		14	-1	50924872	1812
ENSMUSG00000019734	protein_coding	Tmc4	ENSMUST00000130689	retained_intron		7	-1	3677484	679
ENSMUSG00000101286	protein_coding	Gm21317	ENSMUST00000185636	protein_coding	principal1	Y	1	82225227	923
ENSMUSG00000112404	lincRNA	Gm32442	ENSMUST00000220232	lincRNA		12	1	5808217	1972
ENSMUSG00000073805	protein_coding	Insyn2a	ENSMUST00000171394	protein_coding	principal1	7	-1	134938430	2490
ENSMUSG00000006289	protein_coding	Osgep	ENSMUST00000162850	retained_intron		14	-1	50917374	586
ENSMUSG00000001089	protein_coding	Luzp1	ENSMUST00000105849	protein_coding	principal1	4	1	136469761	7438
ENSMUSG00000086032	antisense	Gm15929	ENSMUST00000138926	antisense		7	1	3666252	1161
ENSMUSG00000100268	unprocessed_pseudogene	Gm29468	ENSMUST00000185978	unprocessed_pseudogene		Y	-1	82317262	696
ENSMUSG00000034648	protein_coding	Lrrn1	ENSMUST00000049285	protein_coding	principal1	6	1	107529768	3700
ENSMUSG00000112404	lincRNA	Gm32442	ENSMUST00000219472	lincRNA		12	1	5808234	780
ENSMUSG00000062031	protein_coding	Pgghg	ENSMUST00000163094	nonsense_mediated_decay		7	1	140942355	1835
ENSMUSG00000024944	protein_coding	Arl2	ENSMUST00000134821	retained_intron		19	-1	6141140	2305
ENSMUSG00000006289	protein_coding	Osgep	ENSMUST00000160375	protein_coding		14	-1	50924626	713
ENSMUSG00000073805	protein_coding	Insyn2a	ENSMUST00000210826	retained_intron		7	-1	134938278	2396
ENSMUSG00000035632	protein_coding	Cnot3	ENSMUST00000206331	retained_intron		7	1	3645268	4333
ENSMUSG00000001089	protein_coding	Luzp1	ENSMUST00000142248	retained_intron		4	1	136469803	418
ENSMUSG00000112404	lincRNA	Gm32442	ENSMUST00000219102	lincRNA		12	1	5874914	769
ENSMUSG00000110167	TEC	Gm45532	ENSMUST00000210342	TEC		7	1	134900670	3620
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000001240	protein_coding	principal1	10	-1	78352442	5980
ENSMUSG00000025877	protein_coding	Hk3	ENSMUST00000132309	nonsense_mediated_decay		13	-1	55021296	3067
ENSMUSG00000113861	processed_pseudogene	Gm6190	ENSMUST00000220683	processed_pseudogene		12	-1	88354686	1374
ENSMUSG00000117291	transcribed_processed_pseudogene	Gm18271	ENSMUST00000232700	transcribed_processed_pseudogene		17	1	29154390	945
ENSMUSG00000006289	protein_coding	Osgep	ENSMUST00000160464	retained_intron		14	-1	50924843	839
ENSMUSG00000001089	protein_coding	Luzp1	ENSMUST00000129230	protein_coding		4	1	136469850	349
ENSMUSG00000112404	lincRNA	Gm32442	ENSMUST00000219268	lincRNA		12	1	5874915	708
ENSMUSG00000097947	processed_pseudogene	Gm26970	ENSMUST00000182990	processed_pseudogene		5	1	142283106	964
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000209902	protein_coding	principal5	12	-1	34528328	7940
ENSMUSG00000117291	transcribed_processed_pseudogene	Gm18271	ENSMUST00000233896	processed_transcript		17	1	29154568	498
ENSMUSG00000107496	lincRNA	4933431M02Rik	ENSMUST00000203905	lincRNA		6	1	107627774	1432
ENSMUSG00000001089	protein_coding	Luzp1	ENSMUST00000063021	protein_coding	principal1	4	1	136521395	3775
ENSMUSG00000081918	processed_pseudogene	Gm14613	ENSMUST00000122239	processed_pseudogene		X	-1	41742963	752
ENSMUSG00000113903	processed_pseudogene	Gm5655	ENSMUST00000221078	processed_pseudogene		12	-1	88360257	901
ENSMUSG00000118466	unprocessed_pseudogene	Gm21170	ENSMUST00000238208	unprocessed_pseudogene		Y	-1	47685033	419
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000071798	protein_coding	principal3	7	-1	4515975	1027
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000105389	protein_coding	principal1	10	-1	78298198	3678
ENSMUSG00000025877	protein_coding	Hk3	ENSMUST00000126234	protein_coding	principal3	13	-1	55020904	3032
ENSMUSG00000001089	protein_coding	Luzp1	ENSMUST00000168936	protein_coding		4	1	136545265	415
ENSMUSG00000072188	protein_coding	Gm10354	ENSMUST00000096953	protein_coding	principal1	5	-1	14978935	1215
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000209990	protein_coding	alternative1	12	-1	34528304	3072
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000209750	protein_coding		12	-1	34528304	3204
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000108587	protein_coding	alternative2	7	-1	4516004	1059
ENSMUSG00000053957	lincRNA	Gm12474	ENSMUST00000122898	lincRNA		3	1	100489664	1410
ENSMUSG00000034216	protein_coding	Vps18	ENSMUST00000139367	retained_intron		2	1	119288740	3194
ENSMUSG00000025877	protein_coding	Hk3	ENSMUST00000123097	protein_coding		13	-1	55020904	2896
ENSMUSG00000001089	protein_coding	Luzp1	ENSMUST00000001116	protein_coding	principal1	4	1	136540354	7246
ENSMUSG00000104943	sense_intronic	Gm42868	ENSMUST00000199168	sense_intronic		3	1	100497429	2697
ENSMUSG00000021991	protein_coding	Cacna2d3	ENSMUST00000022567	protein_coding	principal1	14	-1	29721864	3695
ENSMUSG00000102054	lincRNA	Gm29373	ENSMUST00000190660	lincRNA		Y	-1	47835165	1494
ENSMUSG00000102054	lincRNA	Gm29373	ENSMUST00000191017	lincRNA		Y	-1	47834712	437
ENSMUSG00000025877	protein_coding	Hk3	ENSMUST00000148221	protein_coding		13	-1	55021297	423
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000211752	nonsense_mediated_decay		12	-1	34917095	3446
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000163710	protein_coding	alternative2	7	-1	4515959	885
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000210724	protein_coding		12	-1	34528304	2811
ENSMUSG00000111898	processed_pseudogene	Gm48608	ENSMUST00000220422	processed_pseudogene		12	1	6005667	574
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000166161	protein_coding	alternative2	7	-1	4514368	750
ENSMUSG00000021991	protein_coding	Cacna2d3	ENSMUST00000225985	protein_coding		14	-1	28969471	918
ENSMUSG00000025877	protein_coding	Hk3	ENSMUST00000149644	processed_transcript		13	-1	55021322	435
ENSMUSG00000089964	processed_transcript	Gm16582	ENSMUST00000159627	processed_transcript		1	1	74850895	1930
ENSMUSG00000021991	protein_coding	Cacna2d3	ENSMUST00000225668	nonsense_mediated_decay		14	-1	28969413	632
ENSMUSG00000035632	protein_coding	Cnot3	ENSMUST00000143085	retained_intron		7	1	3645290	2963
ENSMUSG00000025877	protein_coding	Hk3	ENSMUST00000135983	processed_transcript		13	-1	55021217	639
ENSMUSG00000101131	lincRNA	Gm29370	ENSMUST00000186581	lincRNA		Y	-1	47857339	174
ENSMUSG00000021991	protein_coding	Cacna2d3	ENSMUST00000225733	non_stop_decay		14	-1	29360834	1458
ENSMUSG00000101131	lincRNA	Gm29370	ENSMUST00000187476	lincRNA		Y	-1	47857333	499
ENSMUSG00000002280	protein_coding	Ciao3	ENSMUST00000134108	protein_coding		17	1	25773776	2062
ENSMUSG00000112591	processed_pseudogene	Gm4927	ENSMUST00000219548	processed_pseudogene		12	-1	6282336	1318
ENSMUSG00000021991	protein_coding	Cacna2d3	ENSMUST00000225863	nonsense_mediated_decay		14	-1	29360834	1588
ENSMUSG00000021991	protein_coding	Cacna2d3	ENSMUST00000224950	retained_intron		14	-1	29097903	605
ENSMUSG00000090071	protein_coding	Cdk5r2	ENSMUST00000160379	protein_coding	principal1	1	1	74854934	2799
ENSMUSG00000027679	protein_coding	Dnajc19	ENSMUST00000011029	protein_coding		3	-1	34081312	2499
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000105390	protein_coding	principal1	10	-1	78351865	3513
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000239340	protein_coding		12	-1	34528440	4110
ENSMUSG00000021991	protein_coding	Cacna2d3	ENSMUST00000226048	retained_intron		14	-1	29333735	892
ENSMUSG00000021991	protein_coding	Cacna2d3	ENSMUST00000225953	retained_intron		14	-1	29360823	830
ENSMUSG00000024944	protein_coding	Arl2	ENSMUST00000025893	protein_coding	principal1	19	-1	6141548	1286
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000105388	protein_coding	principal1	10	-1	78352053	3681
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000168111	retained_intron		7	-1	4509938	796
ENSMUSG00000024944	protein_coding	Arl2	ENSMUST00000236138	processed_transcript		19	-1	6139964	954
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000086502	processed_transcript		7	-1	4508025	485
ENSMUSG00000024944	protein_coding	Arl2	ENSMUST00000235200	processed_transcript		19	-1	6140239	1153
ENSMUSG00000021991	protein_coding	Cacna2d3	ENSMUST00000224128	retained_intron		14	-1	29721795	3637
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000166268	protein_coding		7	-1	4515961	665
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000105387	protein_coding	principal1	10	-1	78295394	1316
ENSMUSG00000114758	processed_pseudogene	Gm48005	ENSMUST00000225833	processed_pseudogene		14	1	29270287	181
ENSMUSG00000024944	protein_coding	Arl2	ENSMUST00000123193	retained_intron		19	-1	6138160	602
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000169571	retained_intron		7	-1	4509798	478
ENSMUSG00000027679	protein_coding	Dnajc19	ENSMUST00000108195	protein_coding	principal1	3	-1	34081321	659
ENSMUSG00000083458	processed_pseudogene	Gm5510	ENSMUST00000117826	processed_pseudogene		19	1	6152715	486
ENSMUSG00000091897	protein_coding	Gm17019	ENSMUST00000167908	protein_coding	principal1	5	-1	15032998	1162
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000110819	protein_coding		12	-1	34528874	4413
ENSMUSG00000002280	protein_coding	Ciao3	ENSMUST00000002350	protein_coding	principal1	17	1	25773776	2555
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000146296	retained_intron		10	-1	78278436	788
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000166959	protein_coding		7	-1	4514615	822
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000219907	retained_intron		10	-1	78285377	699
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000163538	protein_coding		7	-1	4514574	710
ENSMUSG00000002280	protein_coding	Ciao3	ENSMUST00000237541	protein_coding		17	1	25773804	1921
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000239321	protein_coding		12	-1	34907057	2463
ENSMUSG00000027679	protein_coding	Dnajc19	ENSMUST00000120805	protein_coding		3	-1	34081310	551
ENSMUSG00000028405	protein_coding	Aco1	ENSMUST00000102973	protein_coding	principal1	4	1	40143081	3832
ENSMUSG00000002280	protein_coding	Ciao3	ENSMUST00000154711	retained_intron		17	1	25773807	261
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000211107	protein_coding		12	-1	34437307	1683
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000219932	nonsense_mediated_decay		10	-1	78288025	580
ENSMUSG00000024033	protein_coding	Rsph1	ENSMUST00000236379	protein_coding	alternative2	17	-1	31276961	1190
ENSMUSG00000002280	protein_coding	Ciao3	ENSMUST00000236424	retained_intron		17	1	25773813	2652
ENSMUSG00000099339	unprocessed_pseudogene	Gm21751	ENSMUST00000188043	unprocessed_pseudogene		Y	1	47892227	696
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000209667	protein_coding		12	-1	34528304	1635
ENSMUSG00000037617	protein_coding	Spag1	ENSMUST00000047348	protein_coding	principal1	15	1	36179368	3646
ENSMUSG00000062944	protein_coding	9130023H24Rik	ENSMUST00000078816	protein_coding	principal1	7	-1	128238031	3574
ENSMUSG00000111967	processed_pseudogene	Gm3678	ENSMUST00000218888	processed_pseudogene		12	-1	6498615	492
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000139282	protein_coding		10	-1	78320690	513
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000163722	protein_coding		7	-1	4516382	358
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000209463	protein_coding		12	-1	34618493	753
ENSMUSG00000105107	TEC	Gm43412	ENSMUST00000197455	TEC		5	1	123036000	2818
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000163560	protein_coding		7	-1	4515107	218
ENSMUSG00000028405	protein_coding	Aco1	ENSMUST00000152911	processed_transcript		4	1	40163719	714
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000150828	protein_coding		10	-1	78307550	709
ENSMUSG00000035632	protein_coding	Cnot3	ENSMUST00000206287	protein_coding		7	1	3645309	639
ENSMUSG00000034216	protein_coding	Vps18	ENSMUST00000037280	protein_coding	principal1	2	1	119288742	4054
ENSMUSG00000004698	protein_coding	Hdac9	ENSMUST00000211632	retained_intron		12	-1	34906979	3706
ENSMUSG00000028405	protein_coding	Aco1	ENSMUST00000135787	processed_transcript		4	1	40190530	638
ENSMUSG00000042178	protein_coding	Armc5	ENSMUST00000206509	processed_transcript		7	1	128237342	396
ENSMUSG00000027679	protein_coding	Dnajc19	ENSMUST00000197111	retained_intron		3	-1	34080180	419
ENSMUSG00000037617	protein_coding	Spag1	ENSMUST00000171205	protein_coding	principal1	15	1	36179530	3219
ENSMUSG00000052376	TEC	4921508M14Rik	ENSMUST00000061679	TEC		12	-1	34874828	1099
ENSMUSG00000024033	protein_coding	Rsph1	ENSMUST00000024832	protein_coding	principal2	17	-1	31277383	1191
ENSMUSG00000028405	protein_coding	Aco1	ENSMUST00000142360	processed_transcript		4	1	40166877	410
ENSMUSG00000113756	processed_pseudogene	Gm18025	ENSMUST00000221733	processed_pseudogene		12	-1	34291135	862
ENSMUSG00000064179	protein_coding	Tnnt1	ENSMUST00000178163	protein_coding	alternative2	7	-1	4515975	934
ENSMUSG00000027679	protein_coding	Dnajc19	ENSMUST00000117223	protein_coding		3	-1	34081262	1695
ENSMUSG00000113322	lincRNA	Gm48492	ENSMUST00000221385	lincRNA		13	-1	16373180	2705
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000138035	protein_coding		10	-1	78352489	642
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000146899	protein_coding		10	-1	78352212	413
ENSMUSG00000037617	protein_coding	Spag1	ENSMUST00000227436	retained_intron		15	1	36186877	4835
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000096191	protein_coding		16	1	21423118	4952
ENSMUSG00000002280	protein_coding	Ciao3	ENSMUST00000131458	nonsense_mediated_decay		17	1	25773817	612
ENSMUSG00000034216	protein_coding	Vps18	ENSMUST00000151500	processed_transcript		2	1	119288787	3914
ENSMUSG00000117504	processed_pseudogene	Gm46611	ENSMUST00000235052	processed_pseudogene		18	1	23943897	226
ENSMUSG00000043613	protein_coding	Mmp3	ENSMUST00000034497	protein_coding	principal1	9	1	7445822	1801
ENSMUSG00000001211	protein_coding	Agpat3	ENSMUST00000166360	protein_coding	principal1	10	-1	78351700	3439
ENSMUSG00000024033	protein_coding	Rsph1	ENSMUST00000235144	protein_coding		17	-1	31277338	1026
ENSMUSG00000113924	processed_pseudogene	Gm48493	ENSMUST00000222978	processed_pseudogene		13	-1	16389759	3841
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000020365	protein_coding	principal1	10	1	80226434	2640
ENSMUSG00000113232	processed_pseudogene	Gm48494	ENSMUST00000221232	processed_pseudogene		13	1	16390591	264
ENSMUSG00000039699	protein_coding	Batf2	ENSMUST00000134150	processed_transcript		19	1	6140983	1584
ENSMUSG00000117405	processed_pseudogene	Rpl19-ps7	ENSMUST00000234075	processed_pseudogene		18	1	23944959	592
ENSMUSG00000103589	lincRNA	Gm37840	ENSMUST00000194805	lincRNA		Y	-1	23760872	1498
ENSMUSG00000112969	processed_pseudogene	Gm48496	ENSMUST00000221425	processed_pseudogene		13	-1	16431780	256
ENSMUSG00000093606	processed_transcript	B130034C11Rik	ENSMUST00000176296	retained_intron		16	1	87495999	2134
ENSMUSG00000112641	bidirectional_promoter_lncRNA	Gm40709	ENSMUST00000219014	bidirectional_promoter_lncRNA		10	1	78352474	591
ENSMUSG00000002280	protein_coding	Ciao3	ENSMUST00000149645	retained_intron		17	1	25773819	3016
ENSMUSG00000113972	processed_pseudogene	Gm48497	ENSMUST00000222545	processed_pseudogene		13	-1	16533821	283
ENSMUSG00000036180	protein_coding	Gatad2a	ENSMUST00000177851	protein_coding	alternative2	8	-1	69996233	5007
ENSMUSG00000056493	protein_coding	Foxk1	ENSMUST00000198422	protein_coding		5	1	142401497	687
ENSMUSG00000112641	bidirectional_promoter_lncRNA	Gm40709	ENSMUST00000220096	bidirectional_promoter_lncRNA		10	1	78352503	669
ENSMUSG00000093606	processed_transcript	B130034C11Rik	ENSMUST00000175717	lincRNA		16	1	87496073	1401
ENSMUSG00000002280	protein_coding	Ciao3	ENSMUST00000130861	retained_intron		17	1	25776819	655
ENSMUSG00000112641	bidirectional_promoter_lncRNA	Gm40709	ENSMUST00000219695	bidirectional_promoter_lncRNA		10	1	78352540	973
ENSMUSG00000113862	processed_pseudogene	Gm7537	ENSMUST00000221660	processed_pseudogene		13	-1	16639490	1414
ENSMUSG00000103589	lincRNA	Gm37840	ENSMUST00000195139	lincRNA		Y	-1	23760419	621
ENSMUSG00000103589	lincRNA	Gm37840	ENSMUST00000192694	lincRNA		Y	-1	23760419	438
ENSMUSG00000112641	bidirectional_promoter_lncRNA	Gm40709	ENSMUST00000218247	bidirectional_promoter_lncRNA		10	1	78352571	754
ENSMUSG00000085444	antisense	Gm13936	ENSMUST00000130416	antisense		2	1	110196889	715
ENSMUSG00000098246	processed_pseudogene	Gm7627	ENSMUST00000183205	processed_pseudogene		7	-1	69606840	999
ENSMUSG00000102396	lincRNA	Gm37574	ENSMUST00000194264	lincRNA		Y	1	23792729	2166
ENSMUSG00000024276	protein_coding	Zfp397	ENSMUST00000224107	retained_intron		18	1	23954692	3604
ENSMUSG00000104004	lincRNA	4930565D16Rik	ENSMUST00000192777	lincRNA		3	-1	84379921	1112
ENSMUSG00000109373	processed_pseudogene	Gm44690	ENSMUST00000207984	processed_pseudogene		7	-1	69884360	382
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000237357	protein_coding	alternative2	19	1	22139046	12305
ENSMUSG00000082512	processed_pseudogene	Gm13937	ENSMUST00000121000	processed_pseudogene		2	-1	110210165	988
ENSMUSG00000024276	protein_coding	Zfp397	ENSMUST00000225682	protein_coding		18	1	23954705	557
ENSMUSG00000029909	protein_coding	Prss37	ENSMUST00000031967	protein_coding	principal1	6	-1	40519508	1049
ENSMUSG00000108821	TEC	4933423L19Rik	ENSMUST00000208432	TEC		7	1	69948900	1464
ENSMUSG00000090753	processed_pseudogene	Rpl31-ps4	ENSMUST00000079114	processed_pseudogene		16	-1	87549451	390
ENSMUSG00000001627	protein_coding	Ifrd1	ENSMUST00000001672	protein_coding	principal2	12	-1	40223189	3378
ENSMUSG00000029909	protein_coding	Prss37	ENSMUST00000148195	processed_transcript		6	-1	40519483	175
ENSMUSG00000107359	processed_pseudogene	Gm43295	ENSMUST00000201439	processed_pseudogene		6	-1	40523215	412
ENSMUSG00000093877	protein_coding	Olfr1348	ENSMUST00000209029	protein_coding	principal1	7	-1	6508706	2696
ENSMUSG00000001627	protein_coding	Ifrd1	ENSMUST00000164047	protein_coding		12	-1	40207062	491
ENSMUSG00000093877	protein_coding	Olfr1348	ENSMUST00000214383	protein_coding	principal1	7	-1	6508706	2582
ENSMUSG00000093877	protein_coding	Olfr1348	ENSMUST00000213549	protein_coding	principal1	7	-1	6508748	2714
ENSMUSG00000037617	protein_coding	Spag1	ENSMUST00000227524	processed_transcript		15	1	36189764	3446
ENSMUSG00000068259	protein_coding	Olfr461	ENSMUST00000215009	protein_coding	principal1	6	-1	40555050	4292
ENSMUSG00000047205	protein_coding	Dusp18	ENSMUST00000109996	protein_coding	principal1	11	1	3895240	2685
ENSMUSG00000039699	protein_coding	Batf2	ENSMUST00000045042	protein_coding	principal1	19	1	6164439	1391
ENSMUSG00000068259	protein_coding	Olfr461	ENSMUST00000216766	processed_transcript		6	-1	40555032	2727
ENSMUSG00000037617	protein_coding	Spag1	ENSMUST00000227582	retained_intron		15	1	36210462	2388
ENSMUSG00000068259	protein_coding	Olfr461	ENSMUST00000215125	processed_transcript		6	-1	40555041	2101
ENSMUSG00000001627	protein_coding	Ifrd1	ENSMUST00000170119	retained_intron		12	-1	40204642	574
ENSMUSG00000093877	protein_coding	Olfr1348	ENSMUST00000208066	protein_coding	principal1	7	-1	6502320	1135
ENSMUSG00000025489	protein_coding	Ifitm5	ENSMUST00000026562	protein_coding	principal1	7	-1	140950291	765
ENSMUSG00000047205	protein_coding	Dusp18	ENSMUST00000055931	protein_coding	principal1	11	1	3895240	4632
ENSMUSG00000001627	protein_coding	Ifrd1	ENSMUST00000165027	protein_coding	alternative1	12	-1	40217513	1293
ENSMUSG00000024276	protein_coding	Zfp397	ENSMUST00000060762	protein_coding	principal1	18	1	23954705	5472
ENSMUSG00000068259	protein_coding	Olfr461	ENSMUST00000089490	protein_coding	principal1	6	-1	40544977	942
ENSMUSG00000039699	protein_coding	Batf2	ENSMUST00000237511	protein_coding		19	1	6164440	1382
ENSMUSG00000037617	protein_coding	Spag1	ENSMUST00000227715	retained_intron		15	1	36226668	890
ENSMUSG00000037617	protein_coding	Spag1	ENSMUST00000227849	retained_intron		15	1	36231575	2993
ENSMUSG00000039699	protein_coding	Batf2	ENSMUST00000135461	retained_intron		19	1	6164454	882
ENSMUSG00000093877	protein_coding	Olfr1348	ENSMUST00000209097	protein_coding		7	-1	6508558	571
ENSMUSG00000111876	processed_pseudogene	Gm18346	ENSMUST00000216782	processed_pseudogene		10	-1	34214078	325
ENSMUSG00000104247	unprocessed_pseudogene	Gm21768	ENSMUST00000194103	unprocessed_pseudogene		Y	1	23802167	696
ENSMUSG00000024276	protein_coding	Zfp397	ENSMUST00000223595	processed_transcript		18	1	23954859	402
ENSMUSG00000039699	protein_coding	Batf2	ENSMUST00000139326	processed_transcript		19	1	6164454	865
ENSMUSG00000001627	protein_coding	Ifrd1	ENSMUST00000171530	nonsense_mediated_decay		12	-1	40222962	1108
ENSMUSG00000093877	protein_coding	Olfr1348	ENSMUST00000207624	protein_coding		7	-1	6508712	535
ENSMUSG00000042178	protein_coding	Armc5	ENSMUST00000044660	protein_coding	principal1	7	1	128237357	3834
ENSMUSG00000104255	unprocessed_pseudogene	Gm37172	ENSMUST00000191926	unprocessed_pseudogene		Y	1	23839025	615
ENSMUSG00000039699	protein_coding	Batf2	ENSMUST00000132750	processed_transcript		19	1	6164460	857
ENSMUSG00000068324	processed_pseudogene	Gm10029	ENSMUST00000089635	processed_pseudogene		13	-1	6662894	330
ENSMUSG00000024274	transcribed_unprocessed_pseudogene	Zscan30	ENSMUST00000115829	transcribed_unprocessed_pseudogene		18	-1	23971787	1592
ENSMUSG00000093877	protein_coding	Olfr1348	ENSMUST00000208207	protein_coding		7	-1	6508687	433
ENSMUSG00000056493	protein_coding	Foxk1	ENSMUST00000072837	protein_coding	principal1	5	1	142401500	7439
ENSMUSG00000039699	protein_coding	Batf2	ENSMUST00000141858	processed_transcript		19	1	6164489	722
ENSMUSG00000045514	protein_coding	Olfr460	ENSMUST00000216942	protein_coding	principal1	6	1	40569487	3370
ENSMUSG00000050107	protein_coding	Haspin	ENSMUST00000052140	protein_coding	principal1	11	-1	73138294	2810
ENSMUSG00000093877	protein_coding	Olfr1348	ENSMUST00000207055	protein_coding		7	-1	6508473	468
ENSMUSG00000114100	processed_pseudogene	Gm48647	ENSMUST00000221682	processed_pseudogene		12	1	20056153	154
ENSMUSG00000087198	protein_coding	Tmem274	ENSMUST00000210722	protein_coding	principal1	4	1	149477378	537
ENSMUSG00000093877	protein_coding	Olfr1348	ENSMUST00000208623	protein_coding		7	-1	6508656	523
ENSMUSG00000024274	transcribed_unprocessed_pseudogene	Zscan30	ENSMUST00000224144	processed_transcript		18	-1	23987226	1458
ENSMUSG00000087198	protein_coding	Tmem274	ENSMUST00000229840	nonsense_mediated_decay		4	1	149477424	621
ENSMUSG00000045514	protein_coding	Olfr460	ENSMUST00000051540	protein_coding	principal1	6	1	40571357	1061
ENSMUSG00000060591	protein_coding	Ifitm2	ENSMUST00000081649	protein_coding	principal1	7	-1	140955987	655
ENSMUSG00000093877	protein_coding	Olfr1348	ENSMUST00000086319	protein_coding		7	-1	6502325	957
ENSMUSG00000113901	processed_pseudogene	Gm49381	ENSMUST00000221071	processed_pseudogene		12	1	20071882	130
ENSMUSG00000001627	protein_coding	Ifrd1	ENSMUST00000169926	protein_coding		12	-1	40248079	660
ENSMUSG00000111149	lincRNA	Gm26564	ENSMUST00000216701	lincRNA		10	-1	34233531	378
ENSMUSG00000001627	protein_coding	Ifrd1	ENSMUST00000169319	protein_coding		12	-1	40248486	607
ENSMUSG00000111563	TEC	Gm47485	ENSMUST00000217423	TEC		10	-1	34245589	2777
ENSMUSG00000046240	protein_coding	Hepacam	ENSMUST00000051839	protein_coding	principal1	9	1	37367351	3347
ENSMUSG00000113039	unprocessed_pseudogene	Gm9265	ENSMUST00000222981	unprocessed_pseudogene		12	1	20111164	580
ENSMUSG00000113439	processed_pseudogene	Gm49382	ENSMUST00000222265	processed_pseudogene		12	1	20139163	367
ENSMUSG00000001627	protein_coding	Ifrd1	ENSMUST00000170752	retained_intron		12	-1	40223185	2303
ENSMUSG00000110104	protein_coding	Gm45717	ENSMUST00000211129	protein_coding	principal1	7	-1	140955937	495
ENSMUSG00000001627	protein_coding	Ifrd1	ENSMUST00000164354	protein_coding		12	-1	40248504	617
ENSMUSG00000029477	protein_coding	Morn3	ENSMUST00000132775	nonsense_mediated_decay		5	-1	123047016	1048
ENSMUSG00000102742	protein_coding	Pcdhga11	ENSMUST00000061279	protein_coding	principal1	18	1	37755731	4756
ENSMUSG00000001627	protein_coding	Ifrd1	ENSMUST00000171553	retained_intron		12	-1	40223149	606
ENSMUSG00000029477	protein_coding	Morn3	ENSMUST00000129934	protein_coding		5	-1	123037704	308
ENSMUSG00000046240	protein_coding	Hepacam	ENSMUST00000215951	nonsense_mediated_decay		9	1	37367636	800
ENSMUSG00000047514	protein_coding	Tspyl1	ENSMUST00000061372	protein_coding	principal1	10	1	34282190	3086
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000113821	protein_coding	alternative1	6	1	84008590	6803
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000125784	retained_intron		10	1	80226655	3392
ENSMUSG00000114041	unprocessed_pseudogene	Gm9269	ENSMUST00000221661	unprocessed_pseudogene		12	1	20275039	567
ENSMUSG00000018752	protein_coding	Tnfsfm13	ENSMUST00000180587	protein_coding	principal3	11	-1	69696098	2235
ENSMUSG00000029477	protein_coding	Morn3	ENSMUST00000137490	protein_coding		5	-1	123037712	288
ENSMUSG00000113443	processed_pseudogene	Gm48668	ENSMUST00000220815	processed_pseudogene		12	-1	20236118	103
ENSMUSG00000108367	protein_coding	Erfl	ENSMUST00000206705	protein_coding	principal1	7	-1	24944494	1152
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000118923	protein_coding		16	1	21423169	4838
ENSMUSG00000113964	processed_pseudogene	Gm48667	ENSMUST00000220587	processed_pseudogene		12	1	20196916	139
ENSMUSG00000084381	processed_pseudogene	AA413626	ENSMUST00000121125	processed_pseudogene		11	1	4918510	494
ENSMUSG00000029477	protein_coding	Morn3	ENSMUST00000045843	protein_coding		5	-1	123046972	904
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000130260	protein_coding		10	1	80226672	852
ENSMUSG00000108675	lincRNA	Gm44970	ENSMUST00000206318	lincRNA		7	1	24954917	314
ENSMUSG00000116774	unprocessed_pseudogene	Gm49690	ENSMUST00000232194	unprocessed_pseudogene		12	1	20304292	156
ENSMUSG00000046191	protein_coding	Pcdhb20	ENSMUST00000052179	protein_coding	principal1	18	1	37504264	3559
ENSMUSG00000049504	protein_coding	Proser1	ENSMUST00000058577	protein_coding	principal1	3	1	53463666	4472
ENSMUSG00000020660	protein_coding	Pomc	ENSMUST00000219543	protein_coding	principal1	12	1	3954951	1043
ENSMUSG00000035632	protein_coding	Cnot3	ENSMUST00000038913	protein_coding	principal1	7	1	3645352	2822
ENSMUSG00000116736	processed_transcript	Gm49692	ENSMUST00000232183	processed_transcript		12	1	20191900	1303
ENSMUSG00000113430	processed_pseudogene	Gm47086	ENSMUST00000223463	processed_pseudogene		13	1	34318808	410
ENSMUSG00000020660	protein_coding	Pomc	ENSMUST00000218089	protein_coding	principal1	12	1	3954951	977
ENSMUSG00000049504	protein_coding	Proser1	ENSMUST00000198186	retained_intron		3	1	53463807	940
ENSMUSG00000110056	lincRNA	1700014L14Rik	ENSMUST00000211704	lincRNA		8	-1	18334338	481
ENSMUSG00000071398	protein_coding	2410004P03Rik	ENSMUST00000095823	protein_coding	principal1	12	-1	17011727	3437
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000141962	retained_intron		10	1	80226680	2858
ENSMUSG00000035632	protein_coding	Cnot3	ENSMUST00000132344	protein_coding		7	1	3651309	1020
ENSMUSG00000045498	protein_coding	Pcdhb3	ENSMUST00000051754	protein_coding	principal1	18	1	37300799	3787
ENSMUSG00000027787	protein_coding	Nmd3	ENSMUST00000149680	retained_intron		3	1	69721985	401
ENSMUSG00000029477	protein_coding	Morn3	ENSMUST00000031437	protein_coding	principal1	5	-1	123047016	1128
ENSMUSG00000018752	protein_coding	Tnfsfm13	ENSMUST00000174159	protein_coding	alternative2	11	-1	69695810	1470
ENSMUSG00000025610	protein_coding	Map3k7cl	ENSMUST00000026700	protein_coding	principal1	16	1	87553330	1652
ENSMUSG00000049504	protein_coding	Proser1	ENSMUST00000141418	retained_intron		3	1	53463932	1519
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000139431	retained_intron		10	1	80226751	350
ENSMUSG00000049504	protein_coding	Proser1	ENSMUST00000200328	retained_intron		3	1	53478131	1790
ENSMUSG00000035632	protein_coding	Cnot3	ENSMUST00000135977	nonsense_mediated_decay		7	1	3651571	1841
ENSMUSG00000018752	protein_coding	Tnfsfm13	ENSMUST00000108649	protein_coding	alternative2	11	-1	69695809	1049
ENSMUSG00000071398	protein_coding	2410004P03Rik	ENSMUST00000190691	protein_coding		12	-1	17011554	953
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000138801	retained_intron		10	1	80234194	7927
ENSMUSG00000029477	protein_coding	Morn3	ENSMUST00000145257	nonsense_mediated_decay		5	-1	123047005	774
ENSMUSG00000035632	protein_coding	Cnot3	ENSMUST00000129973	retained_intron		7	1	3658172	852
ENSMUSG00000071398	protein_coding	2410004P03Rik	ENSMUST00000189479	protein_coding		12	-1	17011503	513
ENSMUSG00000085890	antisense	Tnfsf13os	ENSMUST00000144033	antisense		11	1	69682138	578
ENSMUSG00000035632	protein_coding	Cnot3	ENSMUST00000160200	protein_coding		7	1	3659390	541
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000135598	retained_intron		10	1	80234195	1137
ENSMUSG00000028992	protein_coding	Nmnat1	ENSMUST00000119921	protein_coding		4	-1	149485202	2657
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000146538	retained_intron		10	1	80234260	3847
ENSMUSG00000021144	protein_coding	Mta1	ENSMUST00000009099	protein_coding	alternative2	12	1	113098278	2826
ENSMUSG00000025876	protein_coding	Unc5a	ENSMUST00000026994	protein_coding	principal3	13	1	54949411	3995
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000136208	retained_intron		10	1	80236111	682
ENSMUSG00000021144	protein_coding	Mta1	ENSMUST00000109723	protein_coding		12	1	113098278	2790
ENSMUSG00000108139	processed_pseudogene	Gm44055	ENSMUST00000204376	processed_pseudogene		6	-1	4254334	247
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000126917	retained_intron		10	1	80241538	663
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000189091	processed_transcript		1	1	105663861	354
ENSMUSG00000107510	processed_pseudogene	Gm44057	ENSMUST00000204547	processed_pseudogene		6	-1	4262849	96
ENSMUSG00000020156	protein_coding	Pwwp3a	ENSMUST00000136791	processed_transcript		10	1	80242612	424
ENSMUSG00000025876	protein_coding	Unc5a	ENSMUST00000109994	protein_coding	alternative1	13	1	54949411	3827
ENSMUSG00000021144	protein_coding	Mta1	ENSMUST00000069690	protein_coding	alternative2	12	1	113098323	2697
ENSMUSG00000098779	processed_pseudogene	Gm8602	ENSMUST00000184045	processed_pseudogene		6	1	4359028	607
ENSMUSG00000107564	TEC	Gm44379	ENSMUST00000204501	TEC		6	-1	4364395	164
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000237820	protein_coding		19	1	22139117	5192
ENSMUSG00000085890	antisense	Tnfsf13os	ENSMUST00000140371	antisense		11	1	69684329	816
ENSMUSG00000020660	protein_coding	Pomc	ENSMUST00000020990	protein_coding	principal1	12	1	3954951	1031
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000236312	protein_coding	alternative2	19	1	22139117	5126
ENSMUSG00000085890	antisense	Tnfsf13os	ENSMUST00000145435	antisense		11	1	69684501	565
ENSMUSG00000020660	protein_coding	Pomc	ENSMUST00000218169	protein_coding		12	1	3954969	480
ENSMUSG00000063281	protein_coding	Zfp35	ENSMUST00000074941	protein_coding	principal1	18	1	23989632	3040
ENSMUSG00000110094	lincRNA	Gm45326	ENSMUST00000209234	lincRNA		8	-1	78953914	721
ENSMUSG00000020660	protein_coding	Pomc	ENSMUST00000220006	protein_coding		12	1	3954970	438
ENSMUSG00000109583	lincRNA	Gm39204	ENSMUST00000210045	lincRNA		8	1	78953926	1307
ENSMUSG00000113545	processed_pseudogene	Gm48238	ENSMUST00000223351	processed_pseudogene		13	1	6673139	270
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000117598	protein_coding	principal2	16	1	21423201	4935
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000203803	protein_coding		6	1	84008702	6590
ENSMUSG00000021144	protein_coding	Mta1	ENSMUST00000130926	processed_transcript		12	1	113098401	2119
ENSMUSG00000025876	protein_coding	Unc5a	ENSMUST00000136852	protein_coding		13	1	54996539	501
ENSMUSG00000102598	lincRNA	Gm35670	ENSMUST00000192493	lincRNA		Y	-1	23852312	397
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000139473	protein_coding		16	1	21423272	461
ENSMUSG00000021144	protein_coding	Mta1	ENSMUST00000134488	processed_transcript		12	1	113131332	717
ENSMUSG00000113447	lincRNA	Gm48538	ENSMUST00000221508	lincRNA		12	1	17065413	856
ENSMUSG00000028992	protein_coding	Nmnat1	ENSMUST00000030845	protein_coding	principal1	4	-1	149485198	1238
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000204591	protein_coding	alternative1	6	1	84008702	6641
ENSMUSG00000113932	TEC	2900024D18Rik	ENSMUST00000220700	TEC		13	-1	6925851	569
ENSMUSG00000025876	protein_coding	Unc5a	ENSMUST00000142906	retained_intron		13	1	55003010	898
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000113823	protein_coding	alternative1	6	1	84008702	6578
ENSMUSG00000043089	polymorphic_pseudogene	Mmp1a	ENSMUST00000217651	polymorphic_pseudogene		9	1	7464141	2011
ENSMUSG00000101952	antisense	Gm10550	ENSMUST00000188846	antisense		1	1	93731104	982
ENSMUSG00000025876	protein_coding	Unc5a	ENSMUST00000137967	protein_coding		13	1	55003680	593
ENSMUSG00000021144	protein_coding	Mta1	ENSMUST00000156030	processed_transcript		12	1	113131548	584
ENSMUSG00000102402	unprocessed_pseudogene	Gm20840	ENSMUST00000192165	unprocessed_pseudogene		Y	1	23868563	696
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000125487	protein_coding		16	1	21470187	3350
ENSMUSG00000028992	protein_coding	Nmnat1	ENSMUST00000105693	protein_coding	principal1	4	-1	149485172	1378
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000153860	protein_coding	alternative1	6	1	84008767	6525
ENSMUSG00000028992	protein_coding	Nmnat1	ENSMUST00000126896	protein_coding		4	-1	149485163	393
ENSMUSG00000021144	protein_coding	Mta1	ENSMUST00000109726	protein_coding	principal2	12	1	113098278	2775
ENSMUSG00000021144	protein_coding	Mta1	ENSMUST00000109727	protein_coding		12	1	113098278	2789
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000204987	protein_coding	alternative1	6	1	84019385	6474
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000203695	protein_coding	alternative1	6	1	84019385	6504
ENSMUSG00000028236	protein_coding	Sdr16c5	ENSMUST00000040925	protein_coding	principal1	4	-1	4019663	1385
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000204354	protein_coding	alternative1	6	1	84019385	6432
ENSMUSG00000028236	protein_coding	Sdr16c5	ENSMUST00000126274	processed_transcript		4	-1	4016621	646
ENSMUSG00000048807	protein_coding	Slc35e4	ENSMUST00000109995	protein_coding	alternative1	11	-1	3914664	3063
ENSMUSG00000108014	TEC	Gm44380	ENSMUST00000203125	TEC		6	1	4367774	293
ENSMUSG00000085026	antisense	Srrm3os	ENSMUST00000131896	antisense		5	-1	135844946	1271
ENSMUSG00000113219	processed_pseudogene	Gm17890	ENSMUST00000221419	processed_pseudogene		13	1	17337599	757
ENSMUSG00000107450	processed_pseudogene	Gm2522	ENSMUST00000204280	processed_pseudogene		6	1	4390920	322
ENSMUSG00000113851	antisense	Gm48503	ENSMUST00000223465	antisense		13	1	16937609	205
ENSMUSG00000102946	TEC	Gm37883	ENSMUST00000194970	TEC		6	-1	4484198	725
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000089595	protein_coding	alternative1	6	1	84019385	6613
ENSMUSG00000012429	protein_coding	Mplkip	ENSMUST00000221480	protein_coding	alternative2	13	1	17695192	582
ENSMUSG00000048807	protein_coding	Slc35e4	ENSMUST00000051207	protein_coding	principal2	11	-1	3914664	3059
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000074770	protein_coding	alternative2	19	1	22139117	5162
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000113818	protein_coding	alternative1	6	1	84019386	6571
ENSMUSG00000043089	polymorphic_pseudogene	Mmp1a	ENSMUST00000034492	protein_coding	principal1	9	1	7464141	2022
ENSMUSG00000039860	protein_coding	Srrm3	ENSMUST00000146038	retained_intron		5	1	135806890	1995
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000087576	protein_coding	principal4	19	1	22139117	5192
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000081904	protein_coding	principal4	6	1	84019389	6660
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000235522	protein_coding		19	1	22448183	5320
ENSMUSG00000059654	protein_coding	Reg1	ENSMUST00000204687	protein_coding	principal1	6	1	78422711	904
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000238159	nonsense_mediated_decay		19	1	22448183	5216
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000236372	protein_coding		19	1	22448183	5203
ENSMUSG00000059654	protein_coding	Reg1	ENSMUST00000204601	protein_coding	principal1	6	1	78422771	766
ENSMUSG00000012429	protein_coding	Mplkip	ENSMUST00000049744	protein_coding	principal2	13	1	17695413	2672
ENSMUSG00000012429	protein_coding	Mplkip	ENSMUST00000222292	retained_intron		13	1	17695433	4316
ENSMUSG00000059654	protein_coding	Reg1	ENSMUST00000079926	protein_coding	principal1	6	1	78425983	769
ENSMUSG00000098218	processed_pseudogene	Gm27043	ENSMUST00000182807	processed_pseudogene		13	1	17050921	958
ENSMUSG00000114114	processed_pseudogene	Gm48499	ENSMUST00000222334	processed_pseudogene		13	1	16943846	1724
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000127459	processed_transcript		6	1	84105373	733
ENSMUSG00000097534	bidirectional_promoter_lncRNA	Gm16675	ENSMUST00000208508	bidirectional_promoter_lncRNA		8	-1	46739508	2586
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000152646	retained_intron		6	1	84106551	1991
ENSMUSG00000097534	bidirectional_promoter_lncRNA	Gm16675	ENSMUST00000181167	bidirectional_promoter_lncRNA		8	-1	46739515	1319
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000142711	processed_transcript		6	1	84146747	549
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000238066	protein_coding		19	1	22448183	5194
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000235780	protein_coding		19	1	22448183	5200
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000236804	protein_coding	alternative2	19	1	22448183	5218
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000128965	processed_transcript		6	1	84210484	404
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000118138	processed_transcript		16	1	21508633	3060
ENSMUSG00000033788	protein_coding	Dysf	ENSMUST00000168387	protein_coding		6	1	84008915	6501
ENSMUSG00000026279	protein_coding	Thap4	ENSMUST00000190116	protein_coding	principal1	1	-1	93754780	5558
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000134650	retained_intron		16	1	21527466	398
ENSMUSG00000108142	processed_pseudogene	Gm7498	ENSMUST00000203282	processed_pseudogene		6	1	84031588	1084
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000156580	nonsense_mediated_decay		16	1	21527536	614
ENSMUSG00000055137	protein_coding	Sugct	ENSMUST00000068545	protein_coding	principal1	13	-1	17694739	1701
ENSMUSG00000038267	protein_coding	Slc22a23	ENSMUST00000148390	protein_coding		13	-1	34344451	5496
ENSMUSG00000107682	antisense	Gm33024	ENSMUST00000203143	antisense		6	-1	84012121	633
ENSMUSG00000012017	protein_coding	Scarf2	ENSMUST00000012161	protein_coding	principal2	16	1	17797282	3308
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000232357	nonsense_mediated_decay		16	1	21533112	804
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000037901	protein_coding	alternative2	19	1	22448232	4559
ENSMUSG00000026279	protein_coding	Thap4	ENSMUST00000189728	protein_coding		1	-1	93731926	713
ENSMUSG00000036180	protein_coding	Gatad2a	ENSMUST00000065169	protein_coding	principal3	8	-1	69996384	3812
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000231484	retained_intron		16	1	21563067	724
ENSMUSG00000039860	protein_coding	Srrm3	ENSMUST00000126232	protein_coding		5	1	135806897	526
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000150765	retained_intron		16	1	21568364	525
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000231224	processed_transcript		16	1	21602564	728
ENSMUSG00000012017	protein_coding	Scarf2	ENSMUST00000232577	protein_coding	alternative2	16	1	17797315	3522
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000232132	processed_transcript		16	1	21607846	401
ENSMUSG00000038267	protein_coding	Slc22a23	ENSMUST00000040336	protein_coding	principal1	13	-1	34345182	6251
ENSMUSG00000026739	protein_coding	Bmi1	ENSMUST00000028071	protein_coding	principal1	2	1	18677018	3594
ENSMUSG00000026279	protein_coding	Thap4	ENSMUST00000112905	nonsense_mediated_decay		1	-1	93754864	2096
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000127903	processed_transcript		16	1	21627631	722
ENSMUSG00000055137	protein_coding	Sugct	ENSMUST00000221598	protein_coding		13	-1	17694737	138
ENSMUSG00000026279	protein_coding	Thap4	ENSMUST00000187445	nonsense_mediated_decay		1	-1	93714982	531
ENSMUSG00000055137	protein_coding	Sugct	ENSMUST00000220514	protein_coding		13	-1	17694769	1351
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000115397	protein_coding	alternative1	16	1	21423118	5032
ENSMUSG00000026739	protein_coding	Bmi1	ENSMUST00000132014	processed_transcript		2	1	18677280	464
ENSMUSG00000026279	protein_coding	Thap4	ENSMUST00000189472	protein_coding		1	-1	93749954	600
ENSMUSG00000026739	protein_coding	Bmi1	ENSMUST00000150834	protein_coding		2	1	18677807	521
ENSMUSG00000036180	protein_coding	Gatad2a	ENSMUST00000116463	protein_coding	alternative2	8	-1	69974271	3363
ENSMUSG00000055137	protein_coding	Sugct	ENSMUST00000221138	processed_transcript		13	-1	17695553	1463
ENSMUSG00000033653	protein_coding	Vps8	ENSMUST00000096192	protein_coding		16	1	21423118	4942
ENSMUSG00000029658	protein_coding	Wdr95	ENSMUST00000110502	protein_coding		5	1	149528679	2482
ENSMUSG00000026739	protein_coding	Bmi1	ENSMUST00000156284	protein_coding		2	1	18680374	713
ENSMUSG00000055137	protein_coding	Sugct	ENSMUST00000221467	retained_intron		13	-1	17694736	403
ENSMUSG00000026279	protein_coding	Thap4	ENSMUST00000189173	retained_intron		1	-1	93754650	2001
ENSMUSG00000113889	processed_pseudogene	Gm48501	ENSMUST00000222020	processed_pseudogene		13	1	17360294	3841
ENSMUSG00000038267	protein_coding	Slc22a23	ENSMUST00000128392	retained_intron		13	-1	34193531	707
ENSMUSG00000113024	TEC	Gm48502	ENSMUST00000222753	TEC		13	1	17258771	2871
ENSMUSG00000026739	protein_coding	Bmi1	ENSMUST00000134734	protein_coding		2	1	18680994	426
ENSMUSG00000040570	protein_coding	Rundc3b	ENSMUST00000047485	protein_coding	principal3	5	-1	8622952	3677
ENSMUSG00000038267	protein_coding	Slc22a23	ENSMUST00000145038	nonsense_mediated_decay		13	-1	34344595	786
ENSMUSG00000026739	protein_coding	Bmi1	ENSMUST00000147365	protein_coding		2	1	18681107	359
ENSMUSG00000036180	protein_coding	Gatad2a	ENSMUST00000212478	protein_coding	alternative2	8	-1	69996384	3622
ENSMUSG00000029658	protein_coding	Wdr95	ENSMUST00000202257	retained_intron		5	1	149529685	579
ENSMUSG00000026739	protein_coding	Bmi1	ENSMUST00000051929	protein_coding	principal1	2	1	18680372	2747
ENSMUSG00000012017	protein_coding	Scarf2	ENSMUST00000231329	retained_intron		16	1	17797350	3445
ENSMUSG00000038267	protein_coding	Slc22a23	ENSMUST00000143353	processed_transcript		13	-1	34344203	503
ENSMUSG00000036180	protein_coding	Gatad2a	ENSMUST00000212277	protein_coding		8	-1	69936526	551
ENSMUSG00000040570	protein_coding	Rundc3b	ENSMUST00000115378	protein_coding	alternative2	5	-1	8622952	1891
ENSMUSG00000051726	protein_coding	Kcnf1	ENSMUST00000170580	protein_coding	principal1	12	-1	17176888	4789
ENSMUSG00000049281	protein_coding	Scn3b	ENSMUST00000049941	protein_coding	principal1	9	1	40269217	4150
ENSMUSG00000012017	protein_coding	Scarf2	ENSMUST00000231383	retained_intron		16	1	17803402	2641
ENSMUSG00000101343	processed_pseudogene	Gm29469	ENSMUST00000191448	processed_pseudogene		Y	-1	82345430	315
ENSMUSG00000036180	protein_coding	Gatad2a	ENSMUST00000211960	protein_coding		8	-1	69958404	507
ENSMUSG00000012017	protein_coding	Scarf2	ENSMUST00000231301	protein_coding		16	1	17804809	422
ENSMUSG00000105740	TEC	Gm42685	ENSMUST00000200378	TEC		5	-1	8514852	2390
ENSMUSG00000107456	TEC	Gm10400	ENSMUST00000203920	TEC		6	1	141340553	3835
ENSMUSG00000117703	lincRNA	Gm50306	ENSMUST00000236376	lincRNA		19	1	46124930	414
ENSMUSG00000114017	lincRNA	Gm40662	ENSMUST00000222263	lincRNA		13	-1	7076316	487
ENSMUSG00000114017	lincRNA	Gm40662	ENSMUST00000222208	lincRNA		13	-1	7076316	453
ENSMUSG00000100707	antisense	Gm28523	ENSMUST00000190040	antisense		6	-1	141250009	1588
ENSMUSG00000113368	processed_pseudogene	Gm10054	ENSMUST00000223362	processed_pseudogene		12	1	17233612	431
ENSMUSG00000104228	unprocessed_pseudogene	Gm35955	ENSMUST00000193437	unprocessed_pseudogene		Y	1	23943343	696
ENSMUSG00000108169	TEC	Gm43958	ENSMUST00000204360	TEC		6	1	141442360	3544
ENSMUSG00000113241	lincRNA	Gm40663	ENSMUST00000222463	lincRNA		13	-1	7164335	809
ENSMUSG00000113241	lincRNA	Gm40663	ENSMUST00000221816	lincRNA		13	-1	7175925	1355
ENSMUSG00000113112	processed_pseudogene	Gm8725	ENSMUST00000221829	processed_pseudogene		13	1	7307802	1333
ENSMUSG00000039653	protein_coding	Baat	ENSMUST00000043056	protein_coding	principal1	4	-1	49506557	1941
ENSMUSG00000113225	lincRNA	Gm36074	ENSMUST00000221383	lincRNA		13	1	7446509	591
ENSMUSG00000029658	protein_coding	Wdr95	ENSMUST00000201525	nonsense_mediated_decay		5	1	149529691	2364
ENSMUSG00000039653	protein_coding	Baat	ENSMUST00000166036	protein_coding	principal1	4	-1	49503120	1263
ENSMUSG00000112939	processed_pseudogene	Gm48251	ENSMUST00000221837	processed_pseudogene		13	1	7633044	148
ENSMUSG00000030636	lincRNA	1700010L04Rik	ENSMUST00000179662	lincRNA		7	1	82851599	1015
ENSMUSG00000049281	protein_coding	Scn3b	ENSMUST00000176169	processed_transcript		9	1	40269269	704
ENSMUSG00000030636	lincRNA	1700010L04Rik	ENSMUST00000178848	lincRNA		7	1	82856253	786
ENSMUSG00000103029	lincRNA	Gm37687	ENSMUST00000195020	lincRNA		Y	-1	24054365	1498
ENSMUSG00000029658	protein_coding	Wdr95	ENSMUST00000202805	retained_intron		5	1	149529733	695
ENSMUSG00000029658	protein_coding	Wdr95	ENSMUST00000202902	protein_coding	principal1	5	1	149529733	2574
ENSMUSG00000049281	protein_coding	Scn3b	ENSMUST00000176185	protein_coding		9	1	40269273	4090
ENSMUSG00000029658	protein_coding	Wdr95	ENSMUST00000201183	retained_intron		5	1	149536607	436
ENSMUSG00000030636	lincRNA	1700010L04Rik	ENSMUST00000032872	lincRNA		7	1	82856263	330
ENSMUSG00000102543	protein_coding	Pcdhgc5	ENSMUST00000055935	protein_coding	principal1	18	1	37819513	4741
ENSMUSG00000029658	protein_coding	Wdr95	ENSMUST00000202635	retained_intron		5	1	149581778	358
ENSMUSG00000038754	protein_coding	Elovl3	ENSMUST00000043739	protein_coding	alternative2	19	1	46131897	1593
ENSMUSG00000049281	protein_coding	Scn3b	ENSMUST00000175873	retained_intron		9	1	40269280	1507
ENSMUSG00000109383	lincRNA	Gm36584	ENSMUST00000209046	lincRNA		7	-1	82867074	708
ENSMUSG00000106879	processed_pseudogene	Gm2566	ENSMUST00000201267	processed_pseudogene		5	-1	149503052	431
ENSMUSG00000103029	lincRNA	Gm37687	ENSMUST00000193296	lincRNA		Y	-1	24053912	621
ENSMUSG00000103029	lincRNA	Gm37687	ENSMUST00000192525	lincRNA		Y	-1	24053912	437
ENSMUSG00000049281	protein_coding	Scn3b	ENSMUST00000176634	retained_intron		9	1	40269429	600
ENSMUSG00000102543	protein_coding	Pcdhgc5	ENSMUST00000193890	protein_coding		18	1	37819552	444
ENSMUSG00000113828	unprocessed_pseudogene	Gm48252	ENSMUST00000220516	unprocessed_pseudogene		13	-1	7753278	109
ENSMUSG00000102543	protein_coding	Pcdhgc5	ENSMUST00000193941	protein_coding		18	1	37819566	593
ENSMUSG00000102239	lincRNA	Gm38296	ENSMUST00000195205	lincRNA		Y	1	24086389	2167
ENSMUSG00000036223	protein_coding	Ska1	ENSMUST00000040188	protein_coding	principal1	18	-1	74207779	2630
ENSMUSG00000027787	protein_coding	Nmd3	ENSMUST00000029358	protein_coding	principal1	3	1	69721985	9135
ENSMUSG00000038754	protein_coding	Elovl3	ENSMUST00000237098	protein_coding	principal2	19	1	46131897	1881
ENSMUSG00000113316	TEC	Gm48253	ENSMUST00000223229	TEC		13	-1	7804714	1279
ENSMUSG00000032905	protein_coding	Atg12	ENSMUST00000035648	protein_coding	principal1	18	-1	46741579	4765
ENSMUSG00000107132	antisense	Gm15997	ENSMUST00000202188	antisense		5	-1	149538030	1491
ENSMUSG00000049281	protein_coding	Scn3b	ENSMUST00000171835	protein_coding	principal1	9	1	40269433	4024
ENSMUSG00000113472	TEC	Gm47602	ENSMUST00000223367	TEC		13	-1	63279224	2320
ENSMUSG00000103153	processed_pseudogene	Gm38290	ENSMUST00000195238	processed_pseudogene		Y	1	24091137	315
ENSMUSG00000036223	protein_coding	Ska1	ENSMUST00000237276	nonsense_mediated_decay		18	-1	74207747	1256
ENSMUSG00000032905	protein_coding	Atg12	ENSMUST00000234430	retained_intron		18	-1	46741580	2289
ENSMUSG00000113326	TEC	Gm47586	ENSMUST00000220806	TEC		13	1	63244221	2028
ENSMUSG00000032905	protein_coding	Atg12	ENSMUST00000234830	retained_intron		18	-1	46741557	1274
ENSMUSG00000102543	protein_coding	Pcdhgc5	ENSMUST00000192875	retained_intron		18	1	37819654	5777
ENSMUSG00000036223	protein_coding	Ska1	ENSMUST00000177604	protein_coding	principal1	18	-1	74207818	2605
ENSMUSG00000113126	TEC	Gm47588	ENSMUST00000220476	TEC		13	-1	63414767	3850
ENSMUSG00000084889	lincRNA	Gm12148	ENSMUST00000153791	lincRNA		11	1	43385482	292
ENSMUSG00000099768	unprocessed_pseudogene	Gm29293	ENSMUST00000189416	unprocessed_pseudogene		7	1	40969919	2188
ENSMUSG00000113508	transcribed_processed_pseudogene	Gm9742	ENSMUST00000165220	processed_transcript		13	-1	8038218	1553
ENSMUSG00000104512	antisense	Gm37165	ENSMUST00000193815	antisense		18	-1	37726121	1463
ENSMUSG00000049281	protein_coding	Scn3b	ENSMUST00000114956	protein_coding	principal1	9	1	40269687	4045
ENSMUSG00000113508	transcribed_processed_pseudogene	Gm9742	ENSMUST00000222219	transcribed_processed_pseudogene		13	-1	8031353	1396
ENSMUSG00000103086	unprocessed_pseudogene	Gm38121	ENSMUST00000193213	unprocessed_pseudogene		Y	1	24127690	696
ENSMUSG00000049281	protein_coding	Scn3b	ENSMUST00000176547	protein_coding		9	1	40279442	672
ENSMUSG00000051242	protein_coding	Pcdhb9	ENSMUST00000057228	protein_coding	principal1	18	1	37400855	3055
ENSMUSG00000027787	protein_coding	Nmd3	ENSMUST00000143041	nonsense_mediated_decay		3	1	69722032	494
ENSMUSG00000103327	unprocessed_pseudogene	Gm36047	ENSMUST00000193659	unprocessed_pseudogene		Y	-1	24213221	657
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000222181	processed_transcript		13	1	62964893	677
ENSMUSG00000027787	protein_coding	Nmd3	ENSMUST00000135266	nonsense_mediated_decay		3	1	69722083	697
ENSMUSG00000113412	processed_pseudogene	Gm5191	ENSMUST00000222882	processed_pseudogene		13	1	8128133	1236
ENSMUSG00000049281	protein_coding	Scn3b	ENSMUST00000216398	protein_coding		9	1	40282453	385
ENSMUSG00000051678	protein_coding	Pcdhb6	ENSMUST00000194655	protein_coding		18	1	37333921	681
ENSMUSG00000111509	TEC	Gm47266	ENSMUST00000215330	TEC		9	-1	40276532	630
ENSMUSG00000025229	protein_coding	Pitx3	ENSMUST00000026259	protein_coding	principal1	19	-1	46148326	1380
ENSMUSG00000027787	protein_coding	Nmd3	ENSMUST00000127211	retained_intron		3	1	69722090	945
ENSMUSG00000051678	protein_coding	Pcdhb6	ENSMUST00000061717	protein_coding	principal1	18	1	37333946	3729
ENSMUSG00000025229	protein_coding	Pitx3	ENSMUST00000172980	retained_intron		19	-1	46137289	418
ENSMUSG00000104500	lincRNA	Gm36345	ENSMUST00000194949	lincRNA		Y	-1	24276742	1495
ENSMUSG00000027787	protein_coding	Nmd3	ENSMUST00000143249	protein_coding		3	1	69722255	396
ENSMUSG00000025229	protein_coding	Pitx3	ENSMUST00000172971	protein_coding		19	-1	46140983	326
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000237455	retained_intron		19	1	22692601	1910
ENSMUSG00000073792	protein_coding	Alg6	ENSMUST00000137473	retained_intron		4	1	99715664	3607
ENSMUSG00000103956	antisense	Gm37118	ENSMUST00000194328	antisense		18	-1	37662632	406
ENSMUSG00000062822	protein_coding	4833420G17Rik	ENSMUST00000026519	protein_coding	principal1	13	1	119462768	2565
ENSMUSG00000005947	protein_coding	Itgae	ENSMUST00000102537	retained_intron		11	1	73090583	3825
ENSMUSG00000104500	lincRNA	Gm36345	ENSMUST00000194662	lincRNA		Y	-1	24276290	619
ENSMUSG00000104500	lincRNA	Gm36345	ENSMUST00000195661	lincRNA		Y	-1	24276290	435
ENSMUSG00000027787	protein_coding	Nmd3	ENSMUST00000194168	retained_intron		3	1	69724236	848
ENSMUSG00000103236	lincRNA	Gm37157	ENSMUST00000192120	lincRNA		Y	1	24306236	2168
ENSMUSG00000114126	lincRNA	Gm48257	ENSMUST00000221418	lincRNA		13	-1	8200494	758
ENSMUSG00000113585	processed_transcript	Gm19605	ENSMUST00000221514	antisense		12	-1	110486204	1084
ENSMUSG00000039860	protein_coding	Srrm3	ENSMUST00000013615	nonsense_mediated_decay		5	1	135818106	2289
ENSMUSG00000021356	protein_coding	Irf4	ENSMUST00000021784	protein_coding	principal3	13	1	30749226	4764
ENSMUSG00000103793	protein_coding	Pcdhga6	ENSMUST00000195823	protein_coding	principal1	18	1	37707039	4733
ENSMUSG00000027787	protein_coding	Nmd3	ENSMUST00000150210	retained_intron		3	1	69746432	746
ENSMUSG00000102911	unprocessed_pseudogene	Gm38017	ENSMUST00000194768	unprocessed_pseudogene		Y	1	24315448	695
ENSMUSG00000113585	processed_transcript	Gm19605	ENSMUST00000221557	antisense		12	-1	110475447	455
ENSMUSG00000103008	unprocessed_pseudogene	Gm36468	ENSMUST00000192119	unprocessed_pseudogene		Y	1	24352303	615
ENSMUSG00000113585	processed_transcript	Gm19605	ENSMUST00000221712	antisense		12	-1	110484107	677
ENSMUSG00000062822	protein_coding	4833420G17Rik	ENSMUST00000225186	protein_coding	principal1	13	1	119462772	2627
ENSMUSG00000021356	protein_coding	Irf4	ENSMUST00000110307	protein_coding	alternative1	13	1	30749226	4761
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000236180	retained_intron		19	1	22692619	2628
ENSMUSG00000103058	unprocessed_pseudogene	Gm21845	ENSMUST00000191848	unprocessed_pseudogene		Y	1	24381817	696
ENSMUSG00000062822	protein_coding	4833420G17Rik	ENSMUST00000224081	protein_coding		13	1	119462774	978
ENSMUSG00000027454	protein_coding	Gins1	ENSMUST00000152991	processed_transcript		2	1	150905400	339
ENSMUSG00000113585	processed_transcript	Gm19605	ENSMUST00000220603	antisense		12	-1	110485616	686
ENSMUSG00000062822	protein_coding	4833420G17Rik	ENSMUST00000225292	retained_intron		13	1	119462776	1563
ENSMUSG00000117508	lincRNA	Gm34804	ENSMUST00000234953	lincRNA		18	1	5945183	1317
ENSMUSG00000104318	protein_coding	Pcdha7	ENSMUST00000192631	protein_coding	principal1	18	1	36973802	5337
ENSMUSG00000021356	protein_coding	Irf4	ENSMUST00000222125	protein_coding		13	1	30749307	360
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000237470	protein_coding		19	1	22692770	726
ENSMUSG00000113585	processed_transcript	Gm19605	ENSMUST00000221684	retained_intron		12	-1	110478794	613
ENSMUSG00000117548	TEC	Gm41662	ENSMUST00000234469	TEC		18	-1	6015021	768
ENSMUSG00000113585	processed_transcript	Gm19605	ENSMUST00000222803	antisense		12	-1	110486208	424
ENSMUSG00000073792	protein_coding	Alg6	ENSMUST00000144805	retained_intron		4	1	99715665	3947
ENSMUSG00000113585	processed_transcript	Gm19605	ENSMUST00000221791	antisense		12	-1	110485650	662
ENSMUSG00000062822	protein_coding	4833420G17Rik	ENSMUST00000225726	nonsense_mediated_decay		13	1	119462776	2795
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000136031	protein_coding		6	1	29768011	485
ENSMUSG00000113585	processed_transcript	Gm19605	ENSMUST00000222863	retained_intron		12	-1	110485616	300
ENSMUSG00000093868	protein_coding	Gm20809	ENSMUST00000187943	protein_coding	principal1	Y	1	24455057	1224
ENSMUSG00000041741	protein_coding	Pde3a	ENSMUST00000043259	protein_coding	principal1	6	1	141249269	12302
ENSMUSG00000093868	protein_coding	Gm20809	ENSMUST00000179663	protein_coding	principal1	Y	1	24456582	684
ENSMUSG00000062822	protein_coding	4833420G17Rik	ENSMUST00000224312	protein_coding	principal1	13	1	119462784	3406
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000143707	retained_intron		6	1	29768443	4741
ENSMUSG00000039860	protein_coding	Srrm3	ENSMUST00000144211	protein_coding	principal1	5	1	135818106	3932
ENSMUSG00000041741	protein_coding	Pde3a	ENSMUST00000189060	retained_intron		6	1	141249966	1819
ENSMUSG00000025450	processed_transcript	Gm9752	ENSMUST00000048965	processed_transcript		13	-1	119476761	2659
ENSMUSG00000034274	protein_coding	Thoc5	ENSMUST00000101615	protein_coding		11	1	4895320	2116
ENSMUSG00000102350	lincRNA	Gm37434	ENSMUST00000194239	lincRNA		Y	-1	24567568	1498
ENSMUSG00000017843	protein_coding	Ppp2r5c	ENSMUST00000222276	protein_coding		12	1	110447120	1802
ENSMUSG00000081853	processed_pseudogene	Gm13735	ENSMUST00000120217	processed_pseudogene		2	1	87236572	670
ENSMUSG00000033486	protein_coding	Catsper2	ENSMUST00000154604	nonsense_mediated_decay		2	-1	121413609	2293
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000149436	protein_coding		1	1	93751500	513
ENSMUSG00000034274	protein_coding	Thoc5	ENSMUST00000142543	protein_coding		11	1	4902212	1082
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000237421	retained_intron		19	1	22692783	4221
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000220635	protein_coding		7	-1	31134268	898
ENSMUSG00000102350	lincRNA	Gm37434	ENSMUST00000193405	lincRNA		Y	-1	24567115	621
ENSMUSG00000102350	lincRNA	Gm37434	ENSMUST00000193738	lincRNA		Y	-1	24567115	437
ENSMUSG00000034274	protein_coding	Thoc5	ENSMUST00000148117	processed_transcript		11	1	4902212	592
ENSMUSG00000102993	unprocessed_pseudogene	Gm37765	ENSMUST00000192395	unprocessed_pseudogene		Y	1	24604271	315
ENSMUSG00000034274	protein_coding	Thoc5	ENSMUST00000144371	processed_transcript		11	1	4902212	770
ENSMUSG00000034274	protein_coding	Thoc5	ENSMUST00000155872	processed_transcript		11	1	4915306	600
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000236787	retained_intron		19	1	22692786	1560
ENSMUSG00000039860	protein_coding	Srrm3	ENSMUST00000135615	retained_intron		5	1	135854414	681
ENSMUSG00000039860	protein_coding	Srrm3	ENSMUST00000150566	retained_intron		5	1	135866617	567
ENSMUSG00000034274	protein_coding	Thoc5	ENSMUST00000038237	protein_coding	principal1	11	1	4895343	2235
ENSMUSG00000027454	protein_coding	Gins1	ENSMUST00000028948	protein_coding	principal1	2	1	150909594	1087
ENSMUSG00000112454	lincRNA	Gm48619	ENSMUST00000220141	lincRNA		12	1	6699753	2262
ENSMUSG00000100253	lincRNA	1700020N18Rik	ENSMUST00000188956	lincRNA		1	-1	91406029	547
ENSMUSG00000027454	protein_coding	Gins1	ENSMUST00000140950	processed_transcript		2	1	150909617	648
ENSMUSG00000024687	protein_coding	Osbp	ENSMUST00000025590	protein_coding	principal1	19	1	11965941	4488
ENSMUSG00000027454	protein_coding	Gins1	ENSMUST00000123217	processed_transcript		2	1	150912819	602
ENSMUSG00000082341	processed_pseudogene	Gm14143	ENSMUST00000121686	processed_pseudogene		2	1	150933533	357
ENSMUSG00000099674	lincRNA	Gm29166	ENSMUST00000186716	lincRNA		Y	1	48185737	352
ENSMUSG00000099674	lincRNA	Gm29166	ENSMUST00000189600	lincRNA		Y	1	48185737	537
ENSMUSG00000106004	antisense	Gm43391	ENSMUST00000196145	antisense		5	1	15464171	883
ENSMUSG00000106004	antisense	Gm43391	ENSMUST00000197796	antisense		5	1	15470339	297
ENSMUSG00000106004	antisense	Gm43391	ENSMUST00000198110	antisense		5	1	15473025	1001
ENSMUSG00000044018	protein_coding	Mrpl50	ENSMUST00000057829	protein_coding	principal1	4	-1	49521093	2114
ENSMUSG00000090307	antisense	1700071M16Rik	ENSMUST00000169733	antisense		17	-1	43591509	2504
ENSMUSG00000099762	protein_coding	Gm21149	ENSMUST00000197995	protein_coding	principal1	5	-1	15476523	1212
ENSMUSG00000090307	antisense	1700071M16Rik	ENSMUST00000167672	antisense		17	-1	43591509	767
ENSMUSG00000113843	processed_pseudogene	Gm6129	ENSMUST00000220725	processed_pseudogene		13	-1	34394524	801
ENSMUSG00000111975	processed_pseudogene	Gm46311	ENSMUST00000217971	processed_pseudogene		12	-1	6966960	203
ENSMUSG00000114170	processed_pseudogene	Gm47120	ENSMUST00000222063	processed_pseudogene		13	-1	34426431	202
ENSMUSG00000101069	lincRNA	Gm28194	ENSMUST00000187412	lincRNA		Y	1	48220016	484
ENSMUSG00000090307	antisense	1700071M16Rik	ENSMUST00000172072	antisense		17	-1	43592432	545
ENSMUSG00000109030	unprocessed_pseudogene	Olfr1421-ps1	ENSMUST00000208900	unprocessed_pseudogene		19	1	12020175	208
ENSMUSG00000113998	lincRNA	Gm40909	ENSMUST00000221677	lincRNA		13	-1	34506488	5537
ENSMUSG00000090307	antisense	1700071M16Rik	ENSMUST00000164150	antisense		17	-1	43592442	537
ENSMUSG00000101069	lincRNA	Gm28194	ENSMUST00000191217	lincRNA		Y	1	48220016	174
ENSMUSG00000113998	lincRNA	Gm40909	ENSMUST00000223275	lincRNA		13	-1	34506511	5564
ENSMUSG00000109047	unprocessed_pseudogene	Gm45115	ENSMUST00000208546	unprocessed_pseudogene		19	-1	12020562	58
ENSMUSG00000108947	unprocessed_pseudogene	Olfr1422-ps1	ENSMUST00000208076	unprocessed_pseudogene		19	-1	12021763	743
ENSMUSG00000104252	protein_coding	Pcdha4	ENSMUST00000192512	protein_coding	principal1	18	1	36952648	5363
ENSMUSG00000113554	processed_pseudogene	Gm36758	ENSMUST00000222594	processed_pseudogene		13	1	34561986	310
ENSMUSG00000086071	lincRNA	Gm12354	ENSMUST00000124319	lincRNA		4	-1	19719886	554
ENSMUSG00000109223	unprocessed_pseudogene	Gm45116	ENSMUST00000207392	unprocessed_pseudogene		19	-1	12026920	275
ENSMUSG00000086071	lincRNA	Gm12354	ENSMUST00000131133	lincRNA		4	-1	19720199	518
ENSMUSG00000104252	protein_coding	Pcdha4	ENSMUST00000194235	retained_intron		18	1	36952658	2894
ENSMUSG00000113185	lincRNA	Gm47127	ENSMUST00000221927	lincRNA		13	-1	34612246	1228
ENSMUSG00000033486	protein_coding	Catsper2	ENSMUST00000038073	protein_coding	principal1	2	-1	121413792	2247
ENSMUSG00000104252	protein_coding	Pcdha4	ENSMUST00000192295	protein_coding		18	1	36952675	4129
ENSMUSG00000028292	protein_coding	Rars2	ENSMUST00000029968	protein_coding	principal1	4	1	34614957	1868
ENSMUSG00000033486	protein_coding	Catsper2	ENSMUST00000146521	retained_intron		2	-1	121397455	634
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000027502	protein_coding	principal1	1	1	93754905	4173
ENSMUSG00000033486	protein_coding	Catsper2	ENSMUST00000123982	retained_intron		2	-1	121412290	466
ENSMUSG00000028292	protein_coding	Rars2	ENSMUST00000149620	processed_transcript		4	1	34614961	434
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000187824	protein_coding		1	1	93754988	420
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000099564	protein_coding		19	1	22692786	3486
ENSMUSG00000073792	protein_coding	Alg6	ENSMUST00000097961	protein_coding	principal1	4	1	99715665	3079
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000099569	protein_coding	alternative2	19	1	22692786	5803
ENSMUSG00000042426	protein_coding	Dhx29	ENSMUST00000224176	nonsense_mediated_decay		13	1	112927454	1272
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000185482	nonsense_mediated_decay		1	1	93755035	919
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000099566	protein_coding		19	1	22692788	1450
ENSMUSG00000028292	protein_coding	Rars2	ENSMUST00000136563	processed_transcript		4	1	34614969	371
ENSMUSG00000073792	protein_coding	Alg6	ENSMUST00000141870	processed_transcript		4	1	99715676	378
ENSMUSG00000073792	protein_coding	Alg6	ENSMUST00000107004	protein_coding		4	1	99715676	766
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000235952	retained_intron		19	1	22692793	920
ENSMUSG00000073792	protein_coding	Alg6	ENSMUST00000139799	protein_coding		4	1	99715676	628
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000235712	protein_coding		19	1	22692814	1872
ENSMUSG00000073792	protein_coding	Alg6	ENSMUST00000124147	retained_intron		4	1	99719152	517
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000236009	retained_intron		19	1	22692822	3648
ENSMUSG00000039634	protein_coding	Zfp189	ENSMUST00000107696	protein_coding	principal1	4	1	49521217	2965
ENSMUSG00000070933	protein_coding	Speer4d	ENSMUST00000095006	protein_coding	principal1	5	1	15619064	1194
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000135762	retained_intron		1	1	93755045	4186
ENSMUSG00000052387	protein_coding	Trpm3	ENSMUST00000237223	protein_coding		19	1	22766634	4219
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000189152	processed_transcript		1	1	93755162	343
ENSMUSG00000039634	protein_coding	Zfp189	ENSMUST00000042964	protein_coding	principal1	4	1	49521176	2835
ENSMUSG00000070933	protein_coding	Speer4d	ENSMUST00000119100	protein_coding		5	1	15620162	857
ENSMUSG00000080779	processed_pseudogene	Gm8731	ENSMUST00000118088	processed_pseudogene		18	-1	60779394	412
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000186001	retained_intron		1	1	93768077	565
ENSMUSG00000061666	protein_coding	Gdpd1	ENSMUST00000020804	protein_coding	principal1	11	-1	87074062	2336
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000189872	retained_intron		1	1	93784343	477
ENSMUSG00000105300	antisense	Gm30613	ENSMUST00000197277	antisense		5	-1	15605066	512
ENSMUSG00000091692	protein_coding	4930433I11Rik	ENSMUST00000206529	protein_coding	alternative2	7	1	40987543	2963
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000186811	nonsense_mediated_decay		1	1	93784797	503
ENSMUSG00000067529	protein_coding	Olfr1423	ENSMUST00000214472	protein_coding	principal1	19	-1	12041317	5570
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000186124	retained_intron		1	1	93785583	454
ENSMUSG00000094230	antisense	Gm21847	ENSMUST00000198681	antisense		5	1	15523084	883
ENSMUSG00000067529	protein_coding	Olfr1423	ENSMUST00000087831	protein_coding	principal1	19	-1	12036740	933
ENSMUSG00000094230	antisense	Gm21847	ENSMUST00000178227	antisense		5	1	15516489	1068
ENSMUSG00000109417	unprocessed_pseudogene	Gm44859	ENSMUST00000207831	unprocessed_pseudogene		19	1	12037731	94
ENSMUSG00000026280	protein_coding	Atg4b	ENSMUST00000185754	retained_intron		1	1	93786218	601
ENSMUSG00000091692	protein_coding	4930433I11Rik	ENSMUST00000171664	protein_coding	principal2	7	1	40987555	2424
ENSMUSG00000028292	protein_coding	Rars2	ENSMUST00000142045	processed_transcript		4	1	34614974	1843
ENSMUSG00000028292	protein_coding	Rars2	ENSMUST00000148519	protein_coding		4	1	34614976	326
ENSMUSG00000108397	processed_pseudogene	Gm45171	ENSMUST00000206360	processed_pseudogene		7	1	40989645	736
ENSMUSG00000067528	protein_coding	Olfr1424	ENSMUST00000207681	protein_coding	principal1	19	-1	12062682	1714
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000160708	protein_coding	principal1	8	1	3630955	2908
ENSMUSG00000028292	protein_coding	Rars2	ENSMUST00000155133	processed_transcript		4	1	34614978	683
ENSMUSG00000067528	protein_coding	Olfr1424	ENSMUST00000087830	protein_coding	principal1	19	-1	12059750	942
ENSMUSG00000096878	protein_coding	Gm21083	ENSMUST00000188807	protein_coding	principal1	5	1	15577333	1141
ENSMUSG00000028292	protein_coding	Rars2	ENSMUST00000141519	processed_transcript		4	1	34647712	526
ENSMUSG00000051618	protein_coding	Ubqln3	ENSMUST00000057254	protein_coding	principal1	7	-1	104143279	2376
ENSMUSG00000027744	protein_coding	Stoml3	ENSMUST00000124702	retained_intron		3	1	53488653	653
ENSMUSG00000101907	lincRNA	Gm29472	ENSMUST00000188599	lincRNA		Y	-1	82350188	2167
ENSMUSG00000080836	processed_pseudogene	Gm6444	ENSMUST00000119611	processed_pseudogene		5	1	123066242	458
ENSMUSG00000100035	lincRNA	Gm29473	ENSMUST00000185588	lincRNA		Y	1	82382189	1497
ENSMUSG00000038208	protein_coding	Pgap3	ENSMUST00000090827	protein_coding	principal1	11	-1	98400490	2419
ENSMUSG00000117599	TEC	Gm49971	ENSMUST00000234242	TEC		18	1	46765214	4895
ENSMUSG00000100035	lincRNA	Gm29473	ENSMUST00000186503	lincRNA		Y	1	82382641	437
ENSMUSG00000051437	protein_coding	Ubqlnl	ENSMUST00000059121	protein_coding	principal1	7	-1	104150556	2298
ENSMUSG00000027248	protein_coding	Pdia3	ENSMUST00000028683	protein_coding	principal1	2	1	121413775	2770
ENSMUSG00000069720	protein_coding	4930572O03Rik	ENSMUST00000092696	protein_coding	principal1	5	-1	15657059	1169
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000186807	nonsense_mediated_decay		1	1	105663861	4338
ENSMUSG00000027248	protein_coding	Pdia3	ENSMUST00000153378	processed_transcript		2	1	121413883	400
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000185985	retained_intron		7	-1	31151012	3722
ENSMUSG00000027248	protein_coding	Pdia3	ENSMUST00000135079	nonsense_mediated_decay		2	1	121414108	722
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000188032	retained_intron		7	-1	31151012	3810
ENSMUSG00000106445	protein_coding	Gm21190	ENSMUST00000196384	protein_coding	principal1	5	-1	15529222	1167
ENSMUSG00000038208	protein_coding	Pgap3	ENSMUST00000041218	processed_transcript		11	-1	98392072	2028
ENSMUSG00000027248	protein_coding	Pdia3	ENSMUST00000130450	retained_intron		2	1	121424630	736
ENSMUSG00000082651	processed_pseudogene	Gm14001	ENSMUST00000118847	processed_pseudogene		2	-1	121401391	247
ENSMUSG00000038208	protein_coding	Pgap3	ENSMUST00000125348	processed_transcript		11	-1	98400437	641
ENSMUSG00000084140	processed_pseudogene	Gm14000	ENSMUST00000118670	processed_pseudogene		2	1	121405241	233
ENSMUSG00000040584	protein_coding	Abcb1a	ENSMUST00000047753	protein_coding	principal1	5	1	8660077	4997
ENSMUSG00000038208	protein_coding	Pgap3	ENSMUST00000128058	processed_transcript		11	-1	98400414	887
ENSMUSG00000039781	protein_coding	Cep131	ENSMUST00000106227	protein_coding	principal2	11	-1	120086827	3578
ENSMUSG00000038208	protein_coding	Pgap3	ENSMUST00000128897	protein_coding		11	-1	98400435	1264
ENSMUSG00000102697	protein_coding	Pcdhac2	ENSMUST00000047479	protein_coding	principal1	18	1	37143503	5888
ENSMUSG00000039781	protein_coding	Cep131	ENSMUST00000106229	protein_coding	alternative2	11	-1	120086827	3581
ENSMUSG00000027744	protein_coding	Stoml3	ENSMUST00000029307	protein_coding	principal1	3	1	53488727	1780
ENSMUSG00000039781	protein_coding	Cep131	ENSMUST00000145641	processed_transcript		11	-1	120064968	460
ENSMUSG00000051599	protein_coding	Pcdhb2	ENSMUST00000056522	protein_coding	principal1	18	1	37294812	2813
ENSMUSG00000086031	processed_transcript	Gm12348	ENSMUST00000138915	processed_transcript		11	1	100401508	313
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000162867	nonsense_mediated_decay		8	1	3631152	561
ENSMUSG00000040584	protein_coding	Abcb1a	ENSMUST00000126846	retained_intron		5	1	8719819	2705
ENSMUSG00000040584	protein_coding	Abcb1a	ENSMUST00000145232	processed_transcript		5	1	8719849	129
ENSMUSG00000067338	protein_coding	Tuba3b	ENSMUST00000087445	protein_coding	principal1	6	1	145615757	1775
ENSMUSG00000023913	protein_coding	Pla2g7	ENSMUST00000167214	protein_coding		17	1	43568098	740
ENSMUSG00000040584	protein_coding	Abcb1a	ENSMUST00000138138	retained_intron		5	1	8733288	494
ENSMUSG00000051599	protein_coding	Pcdhb2	ENSMUST00000193137	protein_coding		18	1	37294840	511
ENSMUSG00000104535	TEC	Gm42686	ENSMUST00000199172	TEC		5	-1	8735768	4108
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000159911	protein_coding		8	1	3631153	374
ENSMUSG00000101653	protein_coding	Gm20792	ENSMUST00000189765	protein_coding	principal1	Y	1	48311855	931
ENSMUSG00000105392	TEC	Gm42684	ENSMUST00000197663	TEC		5	1	8669520	3615
ENSMUSG00000104240	unprocessed_pseudogene	Gm36858	ENSMUST00000194501	unprocessed_pseudogene		18	1	36980057	2391
ENSMUSG00000103311	unprocessed_pseudogene	Gm38229	ENSMUST00000191931	unprocessed_pseudogene		Y	1	24640852	696
ENSMUSG00000104070	unprocessed_pseudogene	Gm36866	ENSMUST00000193343	unprocessed_pseudogene		Y	-1	24726367	657
ENSMUSG00000063687	protein_coding	Pcdhb5	ENSMUST00000078271	protein_coding	principal1	18	1	37320381	3535
ENSMUSG00000039781	protein_coding	Cep131	ENSMUST00000156075	processed_transcript		11	-1	120068057	997
ENSMUSG00000042426	protein_coding	Dhx29	ENSMUST00000038574	protein_coding	principal1	13	1	112927454	4682
ENSMUSG00000006522	protein_coding	Itih3	ENSMUST00000006697	protein_coding	principal2	14	-1	30923760	2992
ENSMUSG00000055197	protein_coding	Fev	ENSMUST00000068631	protein_coding	principal1	1	-1	74885419	1490
ENSMUSG00000097430	processed_transcript	Gm10544	ENSMUST00000180516	antisense		18	-1	37178522	2239
ENSMUSG00000042426	protein_coding	Dhx29	ENSMUST00000223866	retained_intron		13	1	112927648	1736
ENSMUSG00000039781	protein_coding	Cep131	ENSMUST00000150463	processed_transcript		11	-1	120070907	819
ENSMUSG00000097430	processed_transcript	Gm10544	ENSMUST00000181887	antisense		18	-1	37178506	1923
ENSMUSG00000041052	protein_coding	Slc7a13	ENSMUST00000035890	protein_coding	principal1	4	1	19818725	2141
ENSMUSG00000042426	protein_coding	Dhx29	ENSMUST00000226022	retained_intron		13	1	112932522	497
ENSMUSG00000055197	protein_coding	Fev	ENSMUST00000159232	protein_coding		1	-1	74885322	928
ENSMUSG00000025212	protein_coding	Sfxn3	ENSMUST00000237222	protein_coding		19	1	45047503	427
ENSMUSG00000114477	processed_pseudogene	Gm8795	ENSMUST00000225929	processed_pseudogene		13	1	112937585	439
ENSMUSG00000039781	protein_coding	Cep131	ENSMUST00000144128	processed_transcript		11	-1	120072022	728
ENSMUSG00000097430	processed_transcript	Gm10544	ENSMUST00000192479	retained_intron		18	-1	37178514	1758
ENSMUSG00000055197	protein_coding	Fev	ENSMUST00000162938	retained_intron		1	-1	74884608	458
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000159888	nonsense_mediated_decay		8	1	3631153	776
ENSMUSG00000039781	protein_coding	Cep131	ENSMUST00000180242	protein_coding	alternative2	11	-1	120086827	3581
ENSMUSG00000042451	protein_coding	Mybph	ENSMUST00000191577	protein_coding	principal1	1	1	134193457	2320
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000162737	retained_intron		8	1	3631157	701
ENSMUSG00000045657	protein_coding	Pcdhb10	ENSMUST00000051126	protein_coding	principal1	18	1	37411664	2851
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000163044	retained_intron		8	1	3631165	605
ENSMUSG00000006522	protein_coding	Itih3	ENSMUST00000227181	retained_intron		14	-1	30923587	3302
ENSMUSG00000029915	protein_coding	Clec5a	ENSMUST00000101491	protein_coding	alternative2	6	-1	40585803	3747
ENSMUSG00000006522	protein_coding	Itih3	ENSMUST00000227995	protein_coding	alternative2	14	-1	30923549	2100
ENSMUSG00000034774	protein_coding	Dsg1c	ENSMUST00000054128	protein_coding	principal1	18	1	20247340	4088
ENSMUSG00000102096	lincRNA	1700101O22Rik	ENSMUST00000187396	lincRNA		12	-1	7380330	339
ENSMUSG00000042451	protein_coding	Mybph	ENSMUST00000038445	protein_coding	principal1	1	1	134193448	1828
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000004745	protein_coding		8	1	3631170	1847
ENSMUSG00000006522	protein_coding	Itih3	ENSMUST00000226547	protein_coding		14	-1	30915387	672
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000161982	retained_intron		8	1	3632915	579
ENSMUSG00000100423	lincRNA	Gm28754	ENSMUST00000188778	lincRNA		Y	1	48405690	1493
ENSMUSG00000006522	protein_coding	Itih3	ENSMUST00000226179	retained_intron		14	-1	30914129	481
ENSMUSG00000006522	protein_coding	Itih3	ENSMUST00000228114	protein_coding		14	-1	30914659	14
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000162974	retained_intron		8	1	3635416	219
ENSMUSG00000045689	protein_coding	Pcdhb4	ENSMUST00000056712	protein_coding	principal1	18	1	37307455	3718
ENSMUSG00000100423	lincRNA	Gm28754	ENSMUST00000190629	lincRNA		Y	1	48406143	431
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000160435	processed_transcript		8	1	3637166	455
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000159370	protein_coding		8	1	3639574	440
ENSMUSG00000029915	protein_coding	Clec5a	ENSMUST00000031975	processed_transcript		6	-1	40585821	1745
ENSMUSG00000103384	antisense	Gm37753	ENSMUST00000192178	antisense		18	-1	36968148	439
ENSMUSG00000100023	lincRNA	Gm28753	ENSMUST00000187804	lincRNA		Y	1	48434615	1498
ENSMUSG00000024480	protein_coding	Ap3s1	ENSMUST00000025357	protein_coding	principal1	18	1	46741876	1520
ENSMUSG00000104264	processed_pseudogene	Gm18529	ENSMUST00000193025	processed_pseudogene		18	1	37305535	1257
ENSMUSG00000026697	protein_coding	Myoc	ENSMUST00000028020	protein_coding	principal1	1	1	162639155	2074
ENSMUSG00000041660	protein_coding	Bbox1	ENSMUST00000046233	protein_coding	principal1	2	-1	110305741	4030
ENSMUSG00000023913	protein_coding	Pla2g7	ENSMUST00000024706	protein_coding	principal1	17	1	43568269	2097
ENSMUSG00000100023	lincRNA	Gm28753	ENSMUST00000188129	lincRNA		Y	1	48435067	437
ENSMUSG00000024480	protein_coding	Ap3s1	ENSMUST00000225520	protein_coding		18	1	46741898	957
ENSMUSG00000112754	processed_pseudogene	Gm9139	ENSMUST00000218817	processed_pseudogene		12	-1	7418124	700
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000159652	retained_intron		8	1	3640707	629
ENSMUSG00000024480	protein_coding	Ap3s1	ENSMUST00000226108	nonsense_mediated_decay		18	1	46741913	743
ENSMUSG00000099915	unprocessed_pseudogene	Gm21191	ENSMUST00000186484	unprocessed_pseudogene		Y	-1	48553437	930
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000162047	retained_intron		8	1	3640764	654
ENSMUSG00000024480	protein_coding	Ap3s1	ENSMUST00000224622	protein_coding		18	1	46741936	978
ENSMUSG00000023913	protein_coding	Pla2g7	ENSMUST00000167418	protein_coding		17	1	43568475	551
ENSMUSG00000091060	protein_coding	Myocos	ENSMUST00000193257	processed_transcript		1	-1	162656841	662
ENSMUSG00000005947	protein_coding	Itgae	ENSMUST00000006101	protein_coding	principal1	11	1	73090583	3845
ENSMUSG00000042429	protein_coding	Adora1	ENSMUST00000086465	protein_coding	principal1	1	-1	134235431	4968
ENSMUSG00000024480	protein_coding	Ap3s1	ENSMUST00000225415	nonsense_mediated_decay		18	1	46741942	417
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000161629	retained_intron		8	1	3640837	757
ENSMUSG00000091060	protein_coding	Myocos	ENSMUST00000193898	protein_coding	alternative2	1	-1	162658106	545
ENSMUSG00000024480	protein_coding	Ap3s1	ENSMUST00000234998	retained_intron		18	1	46757615	1407
ENSMUSG00000004626	protein_coding	Stxbp2	ENSMUST00000162832	retained_intron		8	1	3641612	517
ENSMUSG00000041660	protein_coding	Bbox1	ENSMUST00000133608	protein_coding		2	-1	110314560	844
ENSMUSG00000044624	protein_coding	Gm4922	ENSMUST00000216654	protein_coding	principal1	10	-1	18786793	2357
ENSMUSG00000117429	TEC	A430019L02Rik	ENSMUST00000234279	TEC		18	1	46758557	3421
ENSMUSG00000023913	protein_coding	Pla2g7	ENSMUST00000165706	processed_transcript		17	1	43568635	727
ENSMUSG00000105481	TEC	6430500D05Rik	ENSMUST00000198286	TEC		3	1	53508928	1176
ENSMUSG00000117372	TEC	Gm49972	ENSMUST00000234567	TEC		18	1	46771325	1747
ENSMUSG00000023913	protein_coding	Pla2g7	ENSMUST00000169694	protein_coding		17	1	43568673	1112
ENSMUSG00000099387	lincRNA	Gm29327	ENSMUST00000188229	lincRNA		7	-1	70249776	388
ENSMUSG00000029915	protein_coding	Clec5a	ENSMUST00000129948	protein_coding	principal4	6	-1	40585795	858
ENSMUSG00000074912	processed_transcript	Gm14207	ENSMUST00000147929	processed_transcript		2	-1	119325543	819
ENSMUSG00000067526	protein_coding	Olfr1425	ENSMUST00000214918	protein_coding	principal1	19	-1	12077731	2178
ENSMUSG00000044624	protein_coding	Gm4922	ENSMUST00000055107	protein_coding	principal1	10	-1	18785011	1950
ENSMUSG00000042429	protein_coding	Adora1	ENSMUST00000038191	protein_coding	principal1	1	-1	134235397	3625
ENSMUSG00000074912	processed_transcript	Gm14207	ENSMUST00000156538	processed_transcript		2	-1	119326194	988
ENSMUSG00000109097	lincRNA	Gm29683	ENSMUST00000208511	lincRNA		7	-1	70337822	720
ENSMUSG00000067526	protein_coding	Olfr1425	ENSMUST00000087828	protein_coding		19	-1	12074633	939
ENSMUSG00000074912	processed_transcript	Gm14207	ENSMUST00000124439	processed_transcript		2	-1	119325564	552
ENSMUSG00000107853	processed_pseudogene	Gm18584	ENSMUST00000203098	processed_pseudogene		6	-1	47433089	964
ENSMUSG00000029915	protein_coding	Clec5a	ENSMUST00000177178	protein_coding	alternative2	6	-1	40585790	665
ENSMUSG00000105848	TEC	Gm42683	ENSMUST00000196136	TEC		13	-1	19395453	2328
ENSMUSG00000042429	protein_coding	Adora1	ENSMUST00000187631	protein_coding		1	-1	134235364	763
ENSMUSG00000023913	protein_coding	Pla2g7	ENSMUST00000163489	retained_intron		17	1	43568715	1374
ENSMUSG00000110737	lincRNA	4930444F02Rik	ENSMUST00000215429	lincRNA		10	-1	18831930	6871
ENSMUSG00000109097	lincRNA	Gm29683	ENSMUST00000209071	lincRNA		7	-1	70337843	2488
ENSMUSG00000042429	protein_coding	Adora1	ENSMUST00000169927	protein_coding	principal1	1	-1	134234578	4581
ENSMUSG00000109097	lincRNA	Gm29683	ENSMUST00000207682	lincRNA		7	-1	70337852	397
ENSMUSG00000091060	protein_coding	Myocos	ENSMUST00000169439	protein_coding	principal2	1	-1	162658219	781
ENSMUSG00000109280	lincRNA	Gm35325	ENSMUST00000208979	lincRNA		7	1	70207435	771
ENSMUSG00000105018	TEC	Gm43546	ENSMUST00000196721	TEC		5	1	103635225	943
ENSMUSG00000028238	protein_coding	Atp6v0d2	ENSMUST00000029900	protein_coding	principal1	4	-1	19922605	2539
ENSMUSG00000003062	protein_coding	Stard3nl	ENSMUST00000196268	retained_intron		13	-1	19367955	740
ENSMUSG00000028238	protein_coding	Atp6v0d2	ENSMUST00000128605	protein_coding		4	-1	19916940	374
ENSMUSG00000103647	antisense	Gm37707	ENSMUST00000195309	antisense		1	1	38884754	325
ENSMUSG00000048067	protein_coding	Olfr1349	ENSMUST00000213656	protein_coding	principal1	7	-1	6522888	4492
ENSMUSG00000048067	protein_coding	Olfr1349	ENSMUST00000216447	protein_coding	principal1	7	-1	6522834	2448
ENSMUSG00000021411	protein_coding	Pxdc1	ENSMUST00000053459	protein_coding	principal1	13	-1	34653486	2684
ENSMUSG00000048067	protein_coding	Olfr1349	ENSMUST00000213504	protein_coding	principal1	7	-1	6522802	4935
ENSMUSG00000079492	protein_coding	Gm11127	ENSMUST00000113742	protein_coding	principal1	17	-1	36058371	1344
ENSMUSG00000048067	protein_coding	Olfr1349	ENSMUST00000207820	protein_coding	principal1	7	-1	6522950	1325
ENSMUSG00000021411	protein_coding	Pxdc1	ENSMUST00000021847	nonsense_mediated_decay		13	-1	34652681	2027
ENSMUSG00000021411	protein_coding	Pxdc1	ENSMUST00000125037	nonsense_mediated_decay		13	-1	34652681	1867
ENSMUSG00000006931	protein_coding	P3h4	ENSMUST00000066489	protein_coding	principal2	11	-1	100414836	2178
ENSMUSG00000048067	protein_coding	Olfr1349	ENSMUST00000207043	protein_coding		7	-1	6520305	851
ENSMUSG00000073407	protein_coding	Gm6034	ENSMUST00000097331	protein_coding	principal1	17	1	36042961	1633
ENSMUSG00000021411	protein_coding	Pxdc1	ENSMUST00000152392	processed_transcript		13	-1	34648568	419
ENSMUSG00000003380	protein_coding	Rabac1	ENSMUST00000076961	protein_coding	principal1	7	-1	24972754	899
ENSMUSG00000048067	protein_coding	Olfr1349	ENSMUST00000207075	protein_coding		7	-1	6520305	875
ENSMUSG00000006931	protein_coding	P3h4	ENSMUST00000141840	protein_coding	alternative2	11	-1	100411874	309
ENSMUSG00000048067	protein_coding	Olfr1349	ENSMUST00000051982	protein_coding	principal1	7	-1	6515449	1054
ENSMUSG00000086786	antisense	Gm15908	ENSMUST00000154345	antisense		13	1	34652923	1091
ENSMUSG00000100086	unprocessed_pseudogene	Gm21271	ENSMUST00000186689	unprocessed_pseudogene		Y	-1	48595476	693
ENSMUSG00000003380	protein_coding	Rabac1	ENSMUST00000206222	retained_intron		7	-1	24971984	583
ENSMUSG00000104148	protein_coding	Pcdha2	ENSMUST00000115662	protein_coding	principal2	18	1	36939205	5361
ENSMUSG00000101310	unprocessed_pseudogene	Gm21281	ENSMUST00000189900	unprocessed_pseudogene		Y	-1	48670459	693
ENSMUSG00000027314	protein_coding	Dll4	ENSMUST00000102517	protein_coding	principal1	2	1	119325784	3747
ENSMUSG00000003380	protein_coding	Rabac1	ENSMUST00000206868	processed_transcript		7	-1	24972026	473
ENSMUSG00000104148	protein_coding	Pcdha2	ENSMUST00000195590	protein_coding	alternative2	18	1	36939224	4645
ENSMUSG00000074971	protein_coding	Fibin	ENSMUST00000099626	protein_coding	principal1	2	-1	110363183	2267
ENSMUSG00000050304	protein_coding	Slc25a2	ENSMUST00000239320	processed_transcript		18	-1	37638723	1346
ENSMUSG00000027314	protein_coding	Dll4	ENSMUST00000127102	processed_transcript		2	1	119328538	692
ENSMUSG00000083582	processed_pseudogene	Gm15393	ENSMUST00000120499	processed_pseudogene		1	-1	121507803	219
ENSMUSG00000003380	protein_coding	Rabac1	ENSMUST00000205871	protein_coding		7	-1	24972638	986
ENSMUSG00000081544	processed_pseudogene	Gm13077	ENSMUST00000121941	processed_pseudogene		4	-1	152157490	484
ENSMUSG00000050304	protein_coding	Slc25a2	ENSMUST00000239189	transcribed_unitary_pseudogene		18	-1	37638474	798
ENSMUSG00000050304	protein_coding	Slc25a2	ENSMUST00000058635	protein_coding	principal1	18	-1	37638723	1346
ENSMUSG00000003380	protein_coding	Rabac1	ENSMUST00000206941	processed_transcript		7	-1	24972227	530
ENSMUSG00000081130	processed_pseudogene	Gm8217	ENSMUST00000119136	processed_pseudogene		1	1	121520583	465
ENSMUSG00000003380	protein_coding	Rabac1	ENSMUST00000205771	retained_intron		7	-1	24972552	599
ENSMUSG00000017843	protein_coding	Ppp2r5c	ENSMUST00000220509	protein_coding		12	1	110447252	956
ENSMUSG00000113515	lincRNA	Gm29675	ENSMUST00000222202	lincRNA		13	-1	30795226	5348
ENSMUSG00000050534	protein_coding	Htr5b	ENSMUST00000055884	protein_coding	principal1	1	-1	121528465	1935
ENSMUSG00000044994	protein_coding	Olfr1426	ENSMUST00000219996	protein_coding	principal1	19	-1	12090442	2436
ENSMUSG00000044994	protein_coding	Olfr1426	ENSMUST00000220005	protein_coding	principal1	19	-1	12091648	2466
ENSMUSG00000092305	protein_coding	Prps1l1	ENSMUST00000134550	protein_coding	principal1	12	1	34984761	1676
ENSMUSG00000017843	protein_coding	Ppp2r5c	ENSMUST00000223168	retained_intron		12	1	110447307	2790
ENSMUSG00000044994	protein_coding	Olfr1426	ENSMUST00000208703	protein_coding	principal1	19	-1	12091852	2546
ENSMUSG00000044994	protein_coding	Olfr1426	ENSMUST00000219005	protein_coding	principal1	19	-1	12091860	2507
ENSMUSG00000044994	protein_coding	Olfr1426	ENSMUST00000219155	protein_coding	principal1	19	-1	12091860	2503
ENSMUSG00000058250	protein_coding	Tas2r138	ENSMUST00000076565	protein_coding	principal1	6	-1	40613310	996
ENSMUSG00000020926	protein_coding	Adam11	ENSMUST00000103081	protein_coding	principal3	11	1	102761439	4620
ENSMUSG00000080750	processed_pseudogene	Gm15553	ENSMUST00000118757	processed_pseudogene		16	-1	75746468	262
ENSMUSG00000102329	antisense	Gm10851	ENSMUST00000192087	antisense		2	1	11521706	1685
ENSMUSG00000044994	protein_coding	Olfr1426	ENSMUST00000217952	protein_coding	principal1	19	-1	12091870	3058
ENSMUSG00000025212	protein_coding	Sfxn3	ENSMUST00000062213	protein_coding	principal1	19	1	45047674	2867
ENSMUSG00000106717	TEC	Gm42798	ENSMUST00000200853	TEC		5	-1	31214315	3972
ENSMUSG00000020926	protein_coding	Adam11	ENSMUST00000068150	protein_coding	alternative2	11	1	102761439	5102
ENSMUSG00000031112	protein_coding	Stk26	ENSMUST00000033444	protein_coding	principal1	X	1	50841047	3639
ENSMUSG00000025212	protein_coding	Sfxn3	ENSMUST00000235155	processed_transcript		19	1	45047695	445
ENSMUSG00000044994	protein_coding	Olfr1426	ENSMUST00000112952	protein_coding	principal1	19	-1	12092013	2697
ENSMUSG00000031112	protein_coding	Stk26	ENSMUST00000114887	protein_coding		X	1	50841441	3173
ENSMUSG00000020926	protein_coding	Adam11	ENSMUST00000124879	processed_transcript		11	1	102762089	514
ENSMUSG00000031112	protein_coding	Stk26	ENSMUST00000146956	retained_intron		X	1	50878388	2605
ENSMUSG00000031112	protein_coding	Stk26	ENSMUST00000136741	retained_intron		X	1	50841441	1080
ENSMUSG00000020926	protein_coding	Adam11	ENSMUST00000141563	processed_transcript		11	1	102762186	551
ENSMUSG00000020926	protein_coding	Adam11	ENSMUST00000142912	processed_transcript		11	1	102769767	464
ENSMUSG00000025212	protein_coding	Sfxn3	ENSMUST00000084493	protein_coding		19	1	45047804	2318
ENSMUSG00000020926	protein_coding	Adam11	ENSMUST00000126024	processed_transcript		11	1	102771482	746
ENSMUSG00000039543	protein_coding	Cfap70	ENSMUST00000056073	protein_coding	principal4	14	-1	20452222	3615
ENSMUSG00000025212	protein_coding	Sfxn3	ENSMUST00000236638	processed_transcript		19	1	45047878	530
ENSMUSG00000036131	protein_coding	Frmd7	ENSMUST00000164311	nonsense_mediated_decay		X	-1	50942710	2063
ENSMUSG00000025212	protein_coding	Sfxn3	ENSMUST00000111954	protein_coding		19	1	45047576	2867
ENSMUSG00000020926	protein_coding	Adam11	ENSMUST00000134296	processed_transcript		11	1	102774081	705
ENSMUSG00000103770	protein_coding	Pcdha9	ENSMUST00000115659	protein_coding	principal1	18	1	36997880	5341
ENSMUSG00000027422	protein_coding	Rrbp1	ENSMUST00000037875	protein_coding	alternative2	2	-1	144011263	2701
ENSMUSG00000020926	protein_coding	Adam11	ENSMUST00000143269	processed_transcript		11	1	102774117	788
ENSMUSG00000024560	protein_coding	Cxxc1	ENSMUST00000236663	retained_intron		18	1	74216124	1460
ENSMUSG00000104225	lincRNA	4930517L18Rik	ENSMUST00000191880	lincRNA		18	1	37618906	482
ENSMUSG00000020926	protein_coding	Adam11	ENSMUST00000135513	processed_transcript		11	1	102776554	687
ENSMUSG00000003062	protein_coding	Stard3nl	ENSMUST00000197565	protein_coding	principal1	13	-1	19395734	1391
ENSMUSG00000003062	protein_coding	Stard3nl	ENSMUST00000221380	protein_coding		13	-1	19395734	1268
ENSMUSG00000103585	protein_coding	Pcdhgb4	ENSMUST00000195363	protein_coding	principal1	18	1	37720369	4665
ENSMUSG00000103585	protein_coding	Pcdhgb4	ENSMUST00000195069	processed_transcript		18	1	37720383	3682
ENSMUSG00000036131	protein_coding	Frmd7	ENSMUST00000060650	protein_coding	principal1	X	-1	50942710	2112
ENSMUSG00000029147	protein_coding	Ppm1g	ENSMUST00000202294	protein_coding		5	-1	31220565	1868
ENSMUSG00000044022	protein_coding	Pcdhb21	ENSMUST00000061405	protein_coding	principal1	18	1	37513621	4705
ENSMUSG00000003062	protein_coding	Stard3nl	ENSMUST00000039694	protein_coding	principal1	13	-1	19395795	1327
ENSMUSG00000102206	protein_coding	Pcdha11	ENSMUST00000194050	retained_intron		18	1	37010712	3323
ENSMUSG00000039543	protein_coding	Cfap70	ENSMUST00000022349	protein_coding	alternative2	14	-1	20452222	3549
ENSMUSG00000003062	protein_coding	Stard3nl	ENSMUST00000196537	retained_intron		13	-1	19359125	599
ENSMUSG00000022187	lincRNA	Gm5546	ENSMUST00000056145	lincRNA		3	-1	104366613	2777
ENSMUSG00000028832	protein_coding	Stmn1	ENSMUST00000030636	protein_coding	principal1	4	1	134468320	1060
ENSMUSG00000102206	protein_coding	Pcdha11	ENSMUST00000194691	retained_intron		18	1	37010714	4038
ENSMUSG00000003062	protein_coding	Stard3nl	ENSMUST00000222869	protein_coding		13	-1	19395782	1030
ENSMUSG00000028832	protein_coding	Stmn1	ENSMUST00000130253	processed_transcript		4	1	134468399	612
ENSMUSG00000028832	protein_coding	Stmn1	ENSMUST00000127279	protein_coding		4	1	134468406	474
ENSMUSG00000039543	protein_coding	Cfap70	ENSMUST00000022348	protein_coding	alternative2	14	-1	20452223	3469
ENSMUSG00000028832	protein_coding	Stmn1	ENSMUST00000105867	protein_coding		4	1	134468409	802
ENSMUSG00000032932	protein_coding	Hspa13	ENSMUST00000232633	nonsense_mediated_decay		16	-1	75767104	1837
ENSMUSG00000026080	protein_coding	Chst10	ENSMUST00000027249	protein_coding	principal2	1	-1	38898010	2975
ENSMUSG00000028832	protein_coding	Stmn1	ENSMUST00000105868	protein_coding	principal1	4	1	134469742	967
ENSMUSG00000019852	protein_coding	Arfgef3	ENSMUST00000215836	protein_coding	principal2	10	-1	18743949	14579
ENSMUSG00000026080	protein_coding	Chst10	ENSMUST00000193441	protein_coding		1	-1	38898089	4999
ENSMUSG00000003062	protein_coding	Stard3nl	ENSMUST00000199278	retained_intron		13	-1	19395755	1074
ENSMUSG00000029147	protein_coding	Ppm1g	ENSMUST00000031032	protein_coding	principal1	5	-1	31220687	2307
ENSMUSG00000019852	protein_coding	Arfgef3	ENSMUST00000019999	protein_coding	alternative2	10	-1	18743753	5606
ENSMUSG00000003062	protein_coding	Stard3nl	ENSMUST00000200323	protein_coding		13	-1	19395734	1128
ENSMUSG00000026080	protein_coding	Chst10	ENSMUST00000192948	nonsense_mediated_decay		1	-1	38871760	1086
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000136872	protein_coding	principal1	2	1	90847155	2596
ENSMUSG00000039543	protein_coding	Cfap70	ENSMUST00000141432	retained_intron		14	-1	20452226	1630
ENSMUSG00000003062	protein_coding	Stard3nl	ENSMUST00000196712	retained_intron		13	-1	19395795	4167
ENSMUSG00000039543	protein_coding	Cfap70	ENSMUST00000148692	processed_transcript		14	-1	20429988	440
ENSMUSG00000111474	antisense	Gm32926	ENSMUST00000215162	antisense		10	1	18743469	1176
ENSMUSG00000026080	protein_coding	Chst10	ENSMUST00000194361	protein_coding	alternative2	1	-1	38898161	2996
ENSMUSG00000032932	protein_coding	Hspa13	ENSMUST00000046283	protein_coding	principal1	16	-1	75766821	4237
ENSMUSG00000003062	protein_coding	Stard3nl	ENSMUST00000199924	protein_coding		13	-1	19395759	374
ENSMUSG00000111474	antisense	Gm32926	ENSMUST00000214043	antisense		10	1	18743777	681
ENSMUSG00000039543	protein_coding	Cfap70	ENSMUST00000143940	retained_intron		14	-1	20448701	409
ENSMUSG00000101072	unprocessed_pseudogene	Gm29470	ENSMUST00000188007	unprocessed_pseudogene		Y	-1	82493653	696
ENSMUSG00000116558	unprocessed_pseudogene	Gm49697	ENSMUST00000231862	unprocessed_pseudogene		12	1	20312515	126
ENSMUSG00000029147	protein_coding	Ppm1g	ENSMUST00000202402	retained_intron		5	-1	31205083	1695
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000150232	protein_coding		2	1	90847231	2377
ENSMUSG00000116715	unprocessed_pseudogene	Gm40881	ENSMUST00000232034	unprocessed_pseudogene		12	1	20319605	883
ENSMUSG00000084942	antisense	7330404K18Rik	ENSMUST00000125558	antisense		14	1	20398359	487
ENSMUSG00000026080	protein_coding	Chst10	ENSMUST00000194657	nonsense_mediated_decay		1	-1	38898153	2431
ENSMUSG00000029147	protein_coding	Ppm1g	ENSMUST00000200778	protein_coding		5	-1	31220319	690
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000111467	protein_coding		2	1	90847273	2281
ENSMUSG00000100994	unprocessed_pseudogene	Gm21333	ENSMUST00000187487	unprocessed_pseudogene		Y	-1	82568207	696
ENSMUSG00000029147	protein_coding	Ppm1g	ENSMUST00000201407	protein_coding		5	-1	31207665	615
ENSMUSG00000100861	unprocessed_pseudogene	Gm29382	ENSMUST00000189549	unprocessed_pseudogene		Y	-1	82597904	615
ENSMUSG00000029147	protein_coding	Ppm1g	ENSMUST00000200740	retained_intron		5	-1	31220565	1797
ENSMUSG00000032932	protein_coding	Hspa13	ENSMUST00000114244	protein_coding		16	-1	75766791	2674
ENSMUSG00000028307	protein_coding	Aldob	ENSMUST00000029987	protein_coding	principal1	4	-1	49549546	2016
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000091560	protein_coding	principal2	13	1	63014934	3509
ENSMUSG00000026080	protein_coding	Chst10	ENSMUST00000193435	protein_coding		1	-1	38898134	697
ENSMUSG00000032932	protein_coding	Hspa13	ENSMUST00000137806	retained_intron		16	-1	75766782	2511
ENSMUSG00000028307	protein_coding	Aldob	ENSMUST00000144372	processed_transcript		4	-1	49539886	530
ENSMUSG00000026080	protein_coding	Chst10	ENSMUST00000192175	retained_intron		1	-1	38897986	5522
ENSMUSG00000028307	protein_coding	Aldob	ENSMUST00000148415	processed_transcript		4	-1	49538866	454
ENSMUSG00000026080	protein_coding	Chst10	ENSMUST00000195731	retained_intron		1	-1	38898010	4280
ENSMUSG00000026241	protein_coding	Nppc	ENSMUST00000027449	protein_coding	principal1	1	-1	86670571	1042
ENSMUSG00000090334	processed_pseudogene	Gm17149	ENSMUST00000164712	processed_pseudogene		8	-1	18656989	375
ENSMUSG00000100420	lincRNA	Gm28616	ENSMUST00000187344	lincRNA		5	1	132544435	441
ENSMUSG00000105987	processed_transcript	AI506816	ENSMUST00000198331	processed_transcript		5	-1	23699276	981
ENSMUSG00000087300	antisense	Gm16725	ENSMUST00000138744	antisense		8	-1	18678056	1253
ENSMUSG00000024560	protein_coding	Cxxc1	ENSMUST00000025444	protein_coding	principal1	18	1	74216131	2620
ENSMUSG00000105809	lincRNA	Gm42626	ENSMUST00000196866	lincRNA		5	1	132546056	1148
ENSMUSG00000103500	TEC	Gm38373	ENSMUST00000192042	TEC		5	1	132796153	288
ENSMUSG00000105987	processed_transcript	AI506816	ENSMUST00000198461	lincRNA		5	-1	23710425	503
ENSMUSG00000106097	TEC	Gm42625	ENSMUST00000198611	TEC		5	1	133443342	922
ENSMUSG00000105987	processed_transcript	AI506816	ENSMUST00000198984	lincRNA		5	-1	23712662	345
ENSMUSG00000105987	processed_transcript	AI506816	ENSMUST00000199941	lincRNA		5	-1	23712666	2804
ENSMUSG00000032637	protein_coding	Atxn2l	ENSMUST00000040202	protein_coding	principal3	7	-1	126503437	3853
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000111468	nonsense_mediated_decay		2	1	90847178	1066
ENSMUSG00000105987	processed_transcript	AI506816	ENSMUST00000197153	lincRNA		5	-1	23712667	474
ENSMUSG00000024560	protein_coding	Cxxc1	ENSMUST00000238176	retained_intron		18	1	74217871	2085
ENSMUSG00000024560	protein_coding	Cxxc1	ENSMUST00000238037	retained_intron		18	1	74218841	719
ENSMUSG00000032637	protein_coding	Atxn2l	ENSMUST00000167759	protein_coding	alternative2	7	-1	126502414	4023
ENSMUSG00000100317	unprocessed_pseudogene	Gm28224	ENSMUST00000186078	unprocessed_pseudogene		Y	-1	82634603	697
ENSMUSG00000024560	protein_coding	Cxxc1	ENSMUST00000236679	retained_intron		18	1	74220703	354
ENSMUSG00000101329	lincRNA	Gm28226	ENSMUST00000186916	lincRNA		Y	-1	82643838	2169
ENSMUSG00000032637	protein_coding	Atxn2l	ENSMUST00000206577	protein_coding	alternative2	7	-1	126503355	3894
ENSMUSG00000108364	lincRNA	Gm38997	ENSMUST00000205669	lincRNA		7	-1	41032619	304
ENSMUSG00000032637	protein_coding	Atxn2l	ENSMUST00000206265	protein_coding		7	-1	126493376	503
ENSMUSG00000100532	lincRNA	Gm28225	ENSMUST00000187730	lincRNA		Y	1	82675727	1499
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000057216	processed_transcript		2	1	90847287	1047
ENSMUSG00000100532	lincRNA	Gm28225	ENSMUST00000188925	lincRNA		Y	1	82676180	434
ENSMUSG00000032637	protein_coding	Atxn2l	ENSMUST00000166682	protein_coding		7	-1	126502318	2745
ENSMUSG00000028635	protein_coding	Edn2	ENSMUST00000030384	protein_coding	principal1	4	1	120161206	1462
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000148936	processed_transcript		2	1	90847190	998
ENSMUSG00000032637	protein_coding	Atxn2l	ENSMUST00000179818	protein_coding		7	-1	126502100	682
ENSMUSG00000037016	protein_coding	Frem2	ENSMUST00000091137	protein_coding	principal1	3	-1	53657355	12348
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000146392	retained_intron		2	1	90847253	2241
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000143773	retained_intron		2	1	90852826	457
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000142350	retained_intron		2	1	90863459	412
ENSMUSG00000100789	antisense	Gm29508	ENSMUST00000189971	antisense		12	-1	103314005	541
ENSMUSG00000014164	protein_coding	Klhl3	ENSMUST00000091583	processed_transcript		13	-1	58102428	6871
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000144696	retained_intron		2	1	90852191	3103
ENSMUSG00000102206	protein_coding	Pcdha11	ENSMUST00000115657	protein_coding	principal2	18	1	37010752	5360
ENSMUSG00000100789	antisense	Gm29508	ENSMUST00000191414	antisense		12	-1	103314769	710
ENSMUSG00000027282	protein_coding	Mtch2	ENSMUST00000135026	retained_intron		2	1	90861240	574
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000186634	nonsense_mediated_decay		7	-1	31151033	2735
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000220863	protein_coding		13	1	63015493	3249
ENSMUSG00000102206	protein_coding	Pcdha11	ENSMUST00000192447	protein_coding	alternative2	18	1	37010832	4583
ENSMUSG00000041842	protein_coding	Fhdc1	ENSMUST00000107689	protein_coding	principal1	3	-1	84480429	5918
ENSMUSG00000096753	protein_coding	Fam181a	ENSMUST00000191218	protein_coding	principal1	12	1	103310975	1419
ENSMUSG00000102206	protein_coding	Pcdha11	ENSMUST00000193856	protein_coding		18	1	37012252	625
ENSMUSG00000096753	protein_coding	Fam181a	ENSMUST00000189885	protein_coding		12	1	103314953	665
ENSMUSG00000096753	protein_coding	Fam181a	ENSMUST00000179363	protein_coding	principal1	12	1	103314959	1406
ENSMUSG00000017316	protein_coding	Ppy	ENSMUST00000170554	protein_coding	principal1	11	-1	102101310	487
ENSMUSG00000109361	lincRNA	Gm44946	ENSMUST00000208425	lincRNA		7	-1	70345810	572
ENSMUSG00000041842	protein_coding	Fhdc1	ENSMUST00000091002	protein_coding	principal1	3	-1	84479491	4162
ENSMUSG00000074635	antisense	3110070M22Rik	ENSMUST00000238285	antisense		13	-1	119488384	1133
ENSMUSG00000028990	protein_coding	Lzic	ENSMUST00000124413	protein_coding		4	1	149485229	359
ENSMUSG00000025150	protein_coding	Cbr2	ENSMUST00000026148	protein_coding	principal1	11	-1	120732114	1110
ENSMUSG00000109364	lincRNA	Gm44948	ENSMUST00000209050	lincRNA		7	-1	70347696	149
ENSMUSG00000074635	antisense	3110070M22Rik	ENSMUST00000099148	antisense		13	-1	119488383	1123
ENSMUSG00000031169	protein_coding	Porcn	ENSMUST00000082320	protein_coding	alternative1	X	-1	8206525	1883
ENSMUSG00000047910	protein_coding	Pcdhb16	ENSMUST00000051442	protein_coding	principal1	18	1	37477814	5225
ENSMUSG00000031465	protein_coding	Angpt2	ENSMUST00000033846	protein_coding	principal1	8	-1	18741562	3560
ENSMUSG00000028990	protein_coding	Lzic	ENSMUST00000141293	protein_coding		4	1	149485231	613
ENSMUSG00000114945	lincRNA	Gm48265	ENSMUST00000225099	lincRNA		13	-1	119613472	510
ENSMUSG00000041842	protein_coding	Fhdc1	ENSMUST00000194027	protein_coding		3	-1	84480393	1648
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000221676	nonsense_mediated_decay		13	1	63068115	718
ENSMUSG00000025150	protein_coding	Cbr2	ENSMUST00000154479	retained_intron		11	-1	120730105	513
ENSMUSG00000028990	protein_coding	Lzic	ENSMUST00000138464	processed_transcript		4	1	149485240	407
ENSMUSG00000041842	protein_coding	Fhdc1	ENSMUST00000125643	retained_intron		3	-1	84453763	471
ENSMUSG00000025150	protein_coding	Cbr2	ENSMUST00000154565	protein_coding		11	-1	120731944	461
ENSMUSG00000037016	protein_coding	Frem2	ENSMUST00000197519	processed_transcript		3	-1	53544268	3336
ENSMUSG00000031465	protein_coding	Angpt2	ENSMUST00000170200	processed_transcript		8	-1	18699547	652
ENSMUSG00000074634	protein_coding	Tmem267	ENSMUST00000223912	protein_coding	principal1	13	1	119488039	1789
ENSMUSG00000073591	protein_coding	Pcdhb22	ENSMUST00000192409	protein_coding	principal1	18	1	37517871	6609
ENSMUSG00000074634	protein_coding	Tmem267	ENSMUST00000177361	retained_intron		13	1	119488039	4531
ENSMUSG00000041842	protein_coding	Fhdc1	ENSMUST00000131065	processed_transcript		3	-1	84478982	288
ENSMUSG00000037016	protein_coding	Frem2	ENSMUST00000199543	retained_intron		3	-1	53523020	2360
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000222907	nonsense_mediated_decay		13	1	63107522	539
ENSMUSG00000014164	protein_coding	Klhl3	ENSMUST00000160860	protein_coding	principal1	13	-1	58113592	7149
ENSMUSG00000025150	protein_coding	Cbr2	ENSMUST00000149450	retained_intron		11	-1	120731952	637
ENSMUSG00000052135	protein_coding	Foxo6	ENSMUST00000102656	protein_coding	principal1	4	-1	120287349	2615
ENSMUSG00000037016	protein_coding	Frem2	ENSMUST00000199323	retained_intron		3	-1	53652230	669
ENSMUSG00000073591	protein_coding	Pcdhb22	ENSMUST00000097609	protein_coding		18	1	37518359	2266
ENSMUSG00000074634	protein_coding	Tmem267	ENSMUST00000176171	protein_coding	principal1	13	1	119488039	880
ENSMUSG00000017316	protein_coding	Ppy	ENSMUST00000017460	protein_coding	principal1	11	-1	102101319	500
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000220457	processed_transcript		13	1	63151504	1754
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000169055	processed_transcript		19	1	4125934	1477
ENSMUSG00000074634	protein_coding	Tmem267	ENSMUST00000099147	protein_coding	principal1	13	1	119488860	910
ENSMUSG00000084929	antisense	Foxo6os	ENSMUST00000152384	antisense		4	1	120291350	2291
ENSMUSG00000031169	protein_coding	Porcn	ENSMUST00000154695	nonsense_mediated_decay		X	-1	8206491	1324
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000222282	protein_coding		13	1	63191112	776
ENSMUSG00000074634	protein_coding	Tmem267	ENSMUST00000178948	protein_coding	principal1	13	1	119606650	1648
ENSMUSG00000085658	lincRNA	Gm15704	ENSMUST00000144757	lincRNA		6	-1	145746273	2818
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000222929	protein_coding		13	1	63240029	1055
ENSMUSG00000028990	protein_coding	Lzic	ENSMUST00000030842	protein_coding	principal1	4	1	149485294	1817
ENSMUSG00000108869	lincRNA	Gm44532	ENSMUST00000207723	lincRNA		7	-1	70453222	2598
ENSMUSG00000085991	lincRNA	Gm11479	ENSMUST00000134275	lincRNA		11	-1	87074958	387
ENSMUSG00000021038	protein_coding	Vipas39	ENSMUST00000072744	protein_coding	principal1	12	-1	87266256	2524
ENSMUSG00000100005	processed_transcript	B130024G19Rik	ENSMUST00000208041	retained_intron		7	1	70364910	3710
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000001280	protein_coding	principal2	7	-1	31151082	2713
ENSMUSG00000027422	protein_coding	Rrbp1	ENSMUST00000016072	protein_coding	principal4	2	-1	144011263	5177
ENSMUSG00000028990	protein_coding	Lzic	ENSMUST00000146427	processed_transcript		4	1	149485333	402
ENSMUSG00000028940	protein_coding	Hes2	ENSMUST00000030782	protein_coding	principal1	4	1	152158867	2521
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000185589	retained_intron		7	-1	31133314	910
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000202814	protein_coding		7	-1	31138131	764
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000221938	retained_intron		13	1	63240032	268
ENSMUSG00000028940	protein_coding	Hes2	ENSMUST00000138991	processed_transcript		4	1	152159549	645
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000206233	nonsense_mediated_decay		7	-1	31143712	391
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000206432	nonsense_mediated_decay		7	-1	31139871	728
ENSMUSG00000027422	protein_coding	Rrbp1	ENSMUST00000154649	processed_transcript		2	-1	143952281	1048
ENSMUSG00000025491	protein_coding	Ifitm1	ENSMUST00000106042	protein_coding	principal1	7	1	140967221	882
ENSMUSG00000025491	protein_coding	Ifitm1	ENSMUST00000106040	protein_coding	principal1	7	1	140968028	560
ENSMUSG00000021038	protein_coding	Vipas39	ENSMUST00000021426	protein_coding		12	-1	87264244	2509
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000185514	nonsense_mediated_decay		7	-1	31151012	691
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000205298	retained_intron		7	-1	31150953	764
ENSMUSG00000027422	protein_coding	Rrbp1	ENSMUST00000132434	processed_transcript		2	-1	143967593	2896
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000135257	processed_transcript		19	1	4125959	564
ENSMUSG00000021038	protein_coding	Vipas39	ENSMUST00000179379	protein_coding		12	-1	87266209	2418
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000187679	protein_coding		7	-1	31152069	831
ENSMUSG00000025491	protein_coding	Ifitm1	ENSMUST00000026564	protein_coding	principal1	7	1	140968040	736
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000139718	retained_intron		19	1	4125959	1013
ENSMUSG00000027422	protein_coding	Rrbp1	ENSMUST00000136068	processed_transcript		2	-1	143983165	979
ENSMUSG00000023571	protein_coding	C1qtnf12	ENSMUST00000024338	protein_coding	principal1	4	1	155962318	1315
ENSMUSG00000030259	protein_coding	Rassf8	ENSMUST00000111704	protein_coding	principal1	6	1	145746748	5446
ENSMUSG00000021038	protein_coding	Vipas39	ENSMUST00000221707	retained_intron		12	-1	87246850	417
ENSMUSG00000027422	protein_coding	Rrbp1	ENSMUST00000155539	processed_transcript		2	-1	143957645	569
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000186723	protein_coding		7	-1	31155896	762
ENSMUSG00000023571	protein_coding	C1qtnf12	ENSMUST00000149558	processed_transcript		4	1	155964561	423
ENSMUSG00000030259	protein_coding	Rassf8	ENSMUST00000140966	protein_coding		6	1	145750571	427
ENSMUSG00000001248	protein_coding	Gramd1a	ENSMUST00000085636	protein_coding	alternative2	7	-1	31151014	2543
ENSMUSG00000027422	protein_coding	Rrbp1	ENSMUST00000140511	processed_transcript		2	-1	143955182	693
ENSMUSG00000023571	protein_coding	C1qtnf12	ENSMUST00000127222	processed_transcript		4	1	155965097	423
ENSMUSG00000027422	protein_coding	Rrbp1	ENSMUST00000135367	processed_transcript		2	-1	143949736	516
ENSMUSG00000021038	protein_coding	Vipas39	ENSMUST00000222350	retained_intron		12	-1	87266253	1790
ENSMUSG00000100985	antisense	Gm10640	ENSMUST00000187312	antisense		7	1	31155668	496
ENSMUSG00000030259	protein_coding	Rassf8	ENSMUST00000032388	protein_coding	principal1	6	1	145808383	1733
ENSMUSG00000086830	lincRNA	Gm13467	ENSMUST00000145568	lincRNA		2	-1	45751684	281
ENSMUSG00000030259	protein_coding	Rassf8	ENSMUST00000058538	protein_coding		6	1	145819944	1131
ENSMUSG00000100985	antisense	Gm10640	ENSMUST00000190947	antisense		7	1	31162358	1134
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000140267	processed_transcript		19	1	4125959	939
ENSMUSG00000086710	lincRNA	Gm13465	ENSMUST00000129687	lincRNA		2	1	45733457	979
ENSMUSG00000050796	protein_coding	B3galt6	ENSMUST00000052185	protein_coding	principal1	4	-1	155992649	3184
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000138593	processed_transcript		19	1	4125959	1113
ENSMUSG00000097149	antisense	G630030J09Rik	ENSMUST00000181958	antisense		7	1	31149528	2135
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000147633	processed_transcript		19	1	4125959	1078
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000130619	retained_intron		19	1	4125960	1616
ENSMUSG00000030017	protein_coding	Reg3g	ENSMUST00000176650	retained_intron		6	-1	78468571	2089
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000139987	processed_transcript		19	1	4125960	1489
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000151401	processed_transcript		19	1	4125975	801
ENSMUSG00000040140	protein_coding	Tdrd6	ENSMUST00000168073	protein_coding	principal3	17	-1	43630299	7059
ENSMUSG00000100005	processed_transcript	B130024G19Rik	ENSMUST00000189966	bidirectional_promoter_lncRNA		7	1	70365159	2032
ENSMUSG00000100005	processed_transcript	B130024G19Rik	ENSMUST00000191084	antisense		7	1	70386493	634
ENSMUSG00000100005	processed_transcript	B130024G19Rik	ENSMUST00000190320	antisense		7	1	70386493	5451
ENSMUSG00000040140	protein_coding	Tdrd6	ENSMUST00000162232	processed_transcript		17	-1	43620485	468
ENSMUSG00000025612	protein_coding	Bach1	ENSMUST00000026703	protein_coding	principal1	16	1	87698945	5867
ENSMUSG00000100005	processed_transcript	B130024G19Rik	ENSMUST00000207952	antisense		7	1	70410599	485
ENSMUSG00000100005	processed_transcript	B130024G19Rik	ENSMUST00000080024	processed_transcript		7	1	70388305	294
ENSMUSG00000039623	protein_coding	Ap5z1	ENSMUST00000198967	protein_coding		5	1	142463944	382
ENSMUSG00000025612	protein_coding	Bach1	ENSMUST00000151046	processed_transcript		16	1	87698965	545
ENSMUSG00000025612	protein_coding	Bach1	ENSMUST00000156958	retained_intron		16	1	87699004	2210
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000148807	processed_transcript		19	1	4125979	938
ENSMUSG00000110355	processed_pseudogene	Gm7514	ENSMUST00000209475	processed_pseudogene		7	-1	140993513	934
ENSMUSG00000027217	protein_coding	Tspan18	ENSMUST00000111265	protein_coding	principal1	2	-1	93334487	3751
ENSMUSG00000064307	protein_coding	Lrrc51	ENSMUST00000106968	protein_coding	principal1	7	-1	101921212	766
ENSMUSG00000086067	antisense	Gm16183	ENSMUST00000127527	antisense		8	-1	84617184	1193
ENSMUSG00000064307	protein_coding	Lrrc51	ENSMUST00000106967	protein_coding		7	-1	101921225	675
ENSMUSG00000027217	protein_coding	Tspan18	ENSMUST00000028646	protein_coding	principal1	2	-1	93227786	1203
ENSMUSG00000064307	protein_coding	Lrrc51	ENSMUST00000106965	protein_coding		7	-1	101921199	743
ENSMUSG00000006546	protein_coding	Cryba2	ENSMUST00000006721	protein_coding	principal1	1	-1	74893143	720
ENSMUSG00000040140	protein_coding	Tdrd6	ENSMUST00000045717	protein_coding	alternative2	17	-1	43630266	6563
ENSMUSG00000027217	protein_coding	Tspan18	ENSMUST00000154951	processed_transcript		2	-1	93334487	3739
ENSMUSG00000117610	TEC	Gm50054	ENSMUST00000235091	TEC		17	1	29223296	146
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000153654	processed_transcript		19	1	4125989	330
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000140405	processed_transcript		19	1	4125989	875
ENSMUSG00000040140	protein_coding	Tdrd6	ENSMUST00000233077	protein_coding	alternative2	17	-1	43630266	5981
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000137579	processed_transcript		19	1	4126029	673
ENSMUSG00000006546	protein_coding	Cryba2	ENSMUST00000133833	nonsense_mediated_decay		1	-1	74892892	923
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000127555	processed_transcript		19	1	4127572	142
ENSMUSG00000027217	protein_coding	Tspan18	ENSMUST00000181716	processed_transcript		2	-1	93312515	809
ENSMUSG00000027217	protein_coding	Tspan18	ENSMUST00000152141	processed_transcript		2	-1	93334505	674
ENSMUSG00000082507	processed_pseudogene	Gm9378	ENSMUST00000120315	processed_pseudogene		11	1	87078787	471
ENSMUSG00000039623	protein_coding	Ap5z1	ENSMUST00000198135	processed_transcript		5	1	142463999	1242
ENSMUSG00000030017	protein_coding	Reg3g	ENSMUST00000032089	protein_coding	principal1	6	-1	78468872	771
ENSMUSG00000031169	protein_coding	Porcn	ENSMUST00000089403	protein_coding	alternative1	X	-1	8206501	1854
ENSMUSG00000030551	protein_coding	Nr2f2	ENSMUST00000032768	protein_coding	principal1	7	-1	70360593	4222
ENSMUSG00000031169	protein_coding	Porcn	ENSMUST00000077595	protein_coding	principal4	X	-1	8206501	1872
ENSMUSG00000030551	protein_coding	Nr2f2	ENSMUST00000207153	retained_intron		7	-1	70355237	2164
ENSMUSG00000064307	protein_coding	Lrrc51	ENSMUST00000078448	protein_coding	principal1	7	-1	101933857	873
ENSMUSG00000031169	protein_coding	Porcn	ENSMUST00000089402	protein_coding	alternative1	X	-1	8206501	1839
ENSMUSG00000001555	protein_coding	Fkbp10	ENSMUST00000001595	protein_coding	principal1	11	1	100415697	2584
ENSMUSG00000064307	protein_coding	Lrrc51	ENSMUST00000106966	protein_coding	principal1	7	-1	101933868	821
ENSMUSG00000084264	processed_pseudogene	Gm14142	ENSMUST00000117833	processed_pseudogene		2	-1	150946809	296
ENSMUSG00000001555	protein_coding	Fkbp10	ENSMUST00000107400	protein_coding		11	1	100415766	1467
ENSMUSG00000030551	protein_coding	Nr2f2	ENSMUST00000089565	protein_coding		7	-1	70366735	1664
ENSMUSG00000064307	protein_coding	Lrrc51	ENSMUST00000098236	protein_coding		7	-1	101921183	949
ENSMUSG00000082375	processed_pseudogene	Gm14141	ENSMUST00000120236	processed_pseudogene		2	1	150992182	783
ENSMUSG00000028589	protein_coding	1700012P22Rik	ENSMUST00000030323	protein_coding	principal1	4	-1	144438772	974
ENSMUSG00000102428	protein_coding	Pcdhga12	ENSMUST00000044851	protein_coding	principal1	18	1	37765580	5080
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000171743	protein_coding		19	1	4125987	3701
ENSMUSG00000001555	protein_coding	Fkbp10	ENSMUST00000134815	nonsense_mediated_decay		11	1	100415845	853
ENSMUSG00000030551	protein_coding	Nr2f2	ENSMUST00000208474	retained_intron		7	-1	70358403	2715
ENSMUSG00000064307	protein_coding	Lrrc51	ENSMUST00000130155	processed_transcript		7	-1	101933895	699
ENSMUSG00000102428	protein_coding	Pcdhga12	ENSMUST00000193045	retained_intron		18	1	37765773	4352
ENSMUSG00000030551	protein_coding	Nr2f2	ENSMUST00000208081	protein_coding		7	-1	70359921	636
ENSMUSG00000001555	protein_coding	Fkbp10	ENSMUST00000139084	retained_intron		11	1	100420424	815
ENSMUSG00000031169	protein_coding	Porcn	ENSMUST00000122943	nonsense_mediated_decay		X	-1	8206497	2622
ENSMUSG00000058905	processed_pseudogene	Gm10051	ENSMUST00000145209	processed_pseudogene		5	1	133475123	414
ENSMUSG00000064307	protein_coding	Lrrc51	ENSMUST00000106964	protein_coding		7	-1	101933802	872
ENSMUSG00000030551	protein_coding	Nr2f2	ENSMUST00000208681	retained_intron		7	-1	70359895	1275
ENSMUSG00000095213	lincRNA	Gm9944	ENSMUST00000238297	lincRNA		4	-1	144453641	2422
ENSMUSG00000001555	protein_coding	Fkbp10	ENSMUST00000125616	retained_intron		11	1	100423038	767
ENSMUSG00000095213	lincRNA	Gm9944	ENSMUST00000177649	lincRNA		4	-1	144453317	309
ENSMUSG00000047033	protein_coding	Pcdhb15	ENSMUST00000050034	protein_coding	principal1	18	1	37473540	2801
ENSMUSG00000064307	protein_coding	Lrrc51	ENSMUST00000106963	protein_coding		7	-1	101933830	835
ENSMUSG00000101559	lincRNA	Gm28258	ENSMUST00000189033	lincRNA		7	-1	70388410	587
ENSMUSG00000039623	protein_coding	Ap5z1	ENSMUST00000197173	nonsense_mediated_decay		5	1	142464044	812
ENSMUSG00000106172	processed_pseudogene	Gm17979	ENSMUST00000196646	processed_pseudogene		5	1	133519757	611
ENSMUSG00000102447	processed_pseudogene	Gm6621	ENSMUST00000193251	processed_pseudogene		1	1	38907945	772
ENSMUSG00000053916	protein_coding	Nanp	ENSMUST00000066640	protein_coding	principal1	2	-1	151039398	1394
ENSMUSG00000064307	protein_coding	Lrrc51	ENSMUST00000163903	protein_coding		7	-1	101920774	939
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000222680	processed_transcript		13	1	63240045	353
ENSMUSG00000031169	protein_coding	Porcn	ENSMUST00000139744	retained_intron		X	-1	8206513	898
ENSMUSG00000053916	protein_coding	Nanp	ENSMUST00000140124	processed_transcript		2	-1	151039362	380
ENSMUSG00000024845	protein_coding	Tmem134	ENSMUST00000150627	protein_coding	principal1	19	1	4125960	1472
ENSMUSG00000114592	processed_pseudogene	Gm5042	ENSMUST00000224369	processed_pseudogene		13	-1	78273952	484
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000220563	processed_transcript		13	1	63240074	424
ENSMUSG00000114600	processed_pseudogene	Gm46387	ENSMUST00000224031	processed_pseudogene		13	-1	78275639	419
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000223185	processed_transcript		13	1	63240074	348
ENSMUSG00000103615	lincRNA	Gm30045	ENSMUST00000193438	lincRNA		Y	-1	24789853	1495
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000159152	protein_coding		13	1	63240074	2824
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000221820	protein_coding		13	1	63240094	331
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000220884	nonsense_mediated_decay		13	1	63240108	772
ENSMUSG00000103615	lincRNA	Gm30045	ENSMUST00000195452	lincRNA		Y	-1	24789401	619
ENSMUSG00000103615	lincRNA	Gm30045	ENSMUST00000192308	lincRNA		Y	-1	24789401	435
ENSMUSG00000104431	lincRNA	Gm37112	ENSMUST00000194389	lincRNA		Y	1	24819391	2168
ENSMUSG00000020495	protein_coding	Smg8	ENSMUST00000020801	protein_coding	principal1	11	-1	87086774	3218
ENSMUSG00000087143	antisense	A830082K12Rik	ENSMUST00000145613	antisense		13	1	78198017	1474
ENSMUSG00000103758	unprocessed_pseudogene	Gm37287	ENSMUST00000195449	unprocessed_pseudogene		Y	1	24828596	695
ENSMUSG00000087143	antisense	A830082K12Rik	ENSMUST00000137199	antisense		13	1	78199738	702
ENSMUSG00000104146	unprocessed_pseudogene	Gm30175	ENSMUST00000194173	unprocessed_pseudogene		Y	1	24865431	615
ENSMUSG00000087143	antisense	A830082K12Rik	ENSMUST00000144545	antisense		13	1	78199778	814
ENSMUSG00000020495	protein_coding	Smg8	ENSMUST00000143280	protein_coding		11	-1	87085382	1163
ENSMUSG00000039842	protein_coding	Mcph1	ENSMUST00000039412	protein_coding	principal1	8	1	18595131	4662
ENSMUSG00000087143	antisense	A830082K12Rik	ENSMUST00000131564	antisense		13	1	78201984	418
ENSMUSG00000078630	protein_coding	Tomt	ENSMUST00000106969	protein_coding	principal1	7	-1	101903785	2796
ENSMUSG00000087143	antisense	A830082K12Rik	ENSMUST00000123998	antisense		13	1	78202374	2203
ENSMUSG00000087143	antisense	A830082K12Rik	ENSMUST00000134705	antisense		13	1	78202553	475
ENSMUSG00000078630	protein_coding	Tomt	ENSMUST00000106970	protein_coding	principal1	7	-1	101906359	1354
ENSMUSG00000087143	antisense	A830082K12Rik	ENSMUST00000183171	antisense		13	1	78202787	4176
ENSMUSG00000039842	protein_coding	Mcph1	ENSMUST00000124910	nonsense_mediated_decay		8	1	18595164	3878
ENSMUSG00000039842	protein_coding	Mcph1	ENSMUST00000153133	retained_intron		8	1	18595576	2998
ENSMUSG00000039842	protein_coding	Mcph1	ENSMUST00000146819	protein_coding		8	1	18595582	2067
ENSMUSG00000039842	protein_coding	Mcph1	ENSMUST00000133417	protein_coding		8	1	18625563	768
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000142663	nonsense_mediated_decay		7	-1	46795678	4735
ENSMUSG00000039842	protein_coding	Mcph1	ENSMUST00000141244	protein_coding		8	1	18632592	681
ENSMUSG00000017843	protein_coding	Ppp2r5c	ENSMUST00000221715	protein_coding		12	1	110485738	2367
ENSMUSG00000025423	protein_coding	Pias2	ENSMUST00000114777	protein_coding	principal3	18	1	77065208	3060
ENSMUSG00000025423	protein_coding	Pias2	ENSMUST00000235135	nonsense_mediated_decay		18	1	77065245	2633
ENSMUSG00000025423	protein_coding	Pias2	ENSMUST00000114776	protein_coding		18	1	77065690	2077
ENSMUSG00000008763	protein_coding	Man1a2	ENSMUST00000008907	protein_coding	principal1	3	-1	100685503	7969
ENSMUSG00000055809	protein_coding	Dnaaf3	ENSMUST00000094897	protein_coding	principal1	7	-1	4532453	2224
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000220885	processed_transcript		13	1	63272501	894
ENSMUSG00000069171	protein_coding	Nr2f1	ENSMUST00000091458	protein_coding	principal1	13	-1	78199757	3207
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000223204	processed_transcript		13	1	63272816	1754
ENSMUSG00000035458	protein_coding	Tnni3	ENSMUST00000132621	retained_intron		7	-1	4519764	514
ENSMUSG00000025423	protein_coding	Pias2	ENSMUST00000168882	protein_coding	alternative1	18	1	77065819	2254
ENSMUSG00000030842	protein_coding	Lamtor1	ENSMUST00000033131	protein_coding	principal1	7	1	101905904	1119
ENSMUSG00000008763	protein_coding	Man1a2	ENSMUST00000133642	processed_transcript		3	-1	100652592	592
ENSMUSG00000002602	protein_coding	Axl	ENSMUST00000002677	protein_coding	principal3	7	-1	25788687	4265
ENSMUSG00000008763	protein_coding	Man1a2	ENSMUST00000130066	protein_coding		3	-1	100684613	740
ENSMUSG00000030842	protein_coding	Lamtor1	ENSMUST00000193465	protein_coding		7	1	101905978	661
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000220670	processed_transcript		13	1	63272818	688
ENSMUSG00000108783	lincRNA	Gm36546	ENSMUST00000206372	lincRNA		7	-1	43671314	230
ENSMUSG00000030842	protein_coding	Lamtor1	ENSMUST00000211180	retained_intron		7	1	101911817	1936
ENSMUSG00000008763	protein_coding	Man1a2	ENSMUST00000196250	nonsense_mediated_decay		3	-1	100685125	744
ENSMUSG00000110545	processed_pseudogene	Gm7730	ENSMUST00000212486	processed_pseudogene		8	-1	70011002	454
ENSMUSG00000002602	protein_coding	Axl	ENSMUST00000085948	protein_coding	alternative2	7	-1	25788705	3899
ENSMUSG00000069171	protein_coding	Nr2f1	ENSMUST00000150498	protein_coding		13	-1	78197038	2588
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000221364	processed_transcript		13	1	63273034	1481
ENSMUSG00000008763	protein_coding	Man1a2	ENSMUST00000123442	processed_transcript		3	-1	100685308	508
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000221164	processed_transcript		13	1	63273223	459
ENSMUSG00000044265	protein_coding	Olfm5	ENSMUST00000051137	protein_coding	principal1	7	-1	104164831	2268
ENSMUSG00000008763	protein_coding	Man1a2	ENSMUST00000146818	processed_transcript		3	-1	100685459	352
ENSMUSG00000069171	protein_coding	Nr2f1	ENSMUST00000127137	protein_coding		13	-1	78197930	991
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000223007	processed_transcript		13	1	63273258	918
ENSMUSG00000105561	sense_intronic	Gm43462	ENSMUST00000200265	sense_intronic		3	-1	100630944	3648
ENSMUSG00000002602	protein_coding	Axl	ENSMUST00000124442	retained_intron		7	-1	25764064	602
ENSMUSG00000083842	processed_pseudogene	Gm12485	ENSMUST00000119641	processed_pseudogene		3	1	100680265	291
ENSMUSG00000034024	protein_coding	Cct2	ENSMUST00000047672	protein_coding	principal1	10	-1	117063814	1959
ENSMUSG00000044265	protein_coding	Olfm5	ENSMUST00000154555	protein_coding		7	-1	104164812	920
ENSMUSG00000105137	sense_intronic	Gm42869	ENSMUST00000199953	sense_intronic		3	-1	100627022	2121
ENSMUSG00000002602	protein_coding	Axl	ENSMUST00000137211	retained_intron		7	-1	25764413	777
ENSMUSG00000106184	sense_intronic	Gm43463	ENSMUST00000195967	sense_intronic		3	-1	100680094	1803
ENSMUSG00000028430	protein_coding	Nol6	ENSMUST00000030138	protein_coding	principal1	4	-1	41124455	4599
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000223073	processed_transcript		13	1	63278670	1376
ENSMUSG00000105824	sense_intronic	Gm43466	ENSMUST00000197836	sense_intronic		3	-1	100587527	5214
ENSMUSG00000034024	protein_coding	Cct2	ENSMUST00000219690	protein_coding		10	-1	117054901	569
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000222721	processed_transcript		13	1	63278959	1007
ENSMUSG00000069171	protein_coding	Nr2f1	ENSMUST00000125176	protein_coding		13	-1	78196373	841
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000221501	retained_intron		13	1	63281907	587
ENSMUSG00000034024	protein_coding	Cct2	ENSMUST00000218502	processed_transcript		10	-1	117057824	615
ENSMUSG00000024008	protein_coding	Cpne5	ENSMUST00000024805	protein_coding	principal1	17	-1	29238167	5708
ENSMUSG00000069171	protein_coding	Nr2f1	ENSMUST00000135284	processed_transcript		13	-1	78190443	368
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000220485	nonsense_mediated_decay		13	1	63298793	493
ENSMUSG00000028430	protein_coding	Nol6	ENSMUST00000155315	processed_transcript		4	-1	41123299	474
ENSMUSG00000034024	protein_coding	Cct2	ENSMUST00000219036	protein_coding		10	-1	117063375	864
ENSMUSG00000074715	protein_coding	Ccl28	ENSMUST00000099241	protein_coding	principal1	13	1	119623819	3740
ENSMUSG00000028430	protein_coding	Nol6	ENSMUST00000129112	processed_transcript		4	-1	41123534	774
ENSMUSG00000002602	protein_coding	Axl	ENSMUST00000132989	retained_intron		7	-1	25788700	2609
ENSMUSG00000069171	protein_coding	Nr2f1	ENSMUST00000224798	protein_coding		13	-1	78197544	721
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000222846	processed_transcript		13	1	63301255	921
ENSMUSG00000034024	protein_coding	Cct2	ENSMUST00000219573	protein_coding		10	-1	117063763	637
ENSMUSG00000028430	protein_coding	Nol6	ENSMUST00000135059	processed_transcript		4	-1	41122754	700
ENSMUSG00000074715	protein_coding	Ccl28	ENSMUST00000225880	retained_intron		13	1	119649516	1396
ENSMUSG00000002602	protein_coding	Axl	ENSMUST00000132038	protein_coding		7	-1	25774678	563
ENSMUSG00000002602	protein_coding	Axl	ENSMUST00000147680	retained_intron		7	-1	25787066	382
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000221108	retained_intron		13	1	63301273	1599
ENSMUSG00000114301	processed_pseudogene	Gm48300	ENSMUST00000224768	processed_pseudogene		13	-1	119655858	397
ENSMUSG00000002602	protein_coding	Axl	ENSMUST00000137383	retained_intron		7	-1	25787572	455
ENSMUSG00000034024	protein_coding	Cct2	ENSMUST00000218719	protein_coding		10	-1	117063759	538
ENSMUSG00000112951	unprocessed_pseudogene	Gm49929	ENSMUST00000223397	unprocessed_pseudogene		12	1	20415937	139
ENSMUSG00000116606	lincRNA	Gm10479	ENSMUST00000232483	lincRNA		12	1	20426913	654
ENSMUSG00000034024	protein_coding	Cct2	ENSMUST00000218059	protein_coding		10	-1	117063375	655
ENSMUSG00000113749	processed_pseudogene	Mrto4-ps1	ENSMUST00000220565	processed_pseudogene		12	1	20417722	721
ENSMUSG00000021458	protein_coding	Aopep	ENSMUST00000021911	protein_coding	alternative2	13	1	63015167	2979
ENSMUSG00000089854	antisense	Gm16133	ENSMUST00000220823	antisense		13	1	63329556	3600
ENSMUSG00000090627	protein_coding	Gm8356	ENSMUST00000163636	protein_coding	principal5	14	-1	6537290	2062
ENSMUSG00000089854	antisense	Gm16133	ENSMUST00000160278	antisense		13	1	63333137	565
ENSMUSG00000103088	protein_coding	Pcdhgb6	ENSMUST00000003599	protein_coding	principal1	18	1	37742094	4684
ENSMUSG00000090627	protein_coding	Gm8356	ENSMUST00000164917	protein_coding	alternative2	14	-1	6537273	984
ENSMUSG00000089854	antisense	Gm16133	ENSMUST00000160065	antisense		13	1	63333210	734
ENSMUSG00000090627	protein_coding	Gm8356	ENSMUST00000178896	protein_coding		14	-1	6537210	615
ENSMUSG00000113708	TEC	Gm47584	ENSMUST00000220958	TEC		13	1	63009959	1282
ENSMUSG00000083513	unprocessed_pseudogene	Olfr647-ps1	ENSMUST00000121599	unprocessed_pseudogene		7	-1	104168342	960
ENSMUSG00000113853	TEC	Gm47583	ENSMUST00000221858	TEC		13	1	63210950	3425
ENSMUSG00000102836	protein_coding	Gm37013	ENSMUST00000194544	protein_coding	principal1	18	1	36969916	313
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000107398	protein_coding		11	-1	100441808	1635
ENSMUSG00000113665	TEC	Gm47603	ENSMUST00000221520	TEC		13	-1	63255564	2541
ENSMUSG00000017843	protein_coding	Ppp2r5c	ENSMUST00000109832	protein_coding	alternative1	12	1	110485739	4108
ENSMUSG00000102232	transcribed_processed_pseudogene	Gm19035	ENSMUST00000193299	processed_transcript		18	1	37079994	1742
ENSMUSG00000024008	protein_coding	Cpne5	ENSMUST00000126993	retained_intron		17	-1	29184103	2332
ENSMUSG00000102232	transcribed_processed_pseudogene	Gm19035	ENSMUST00000194575	transcribed_processed_pseudogene		18	1	37081499	959
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000092689	protein_coding		11	-1	100441020	1344
ENSMUSG00000024008	protein_coding	Cpne5	ENSMUST00000234157	processed_transcript		17	-1	29159505	362
ENSMUSG00000024008	protein_coding	Cpne5	ENSMUST00000234042	processed_transcript		17	-1	29176683	760
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000107397	protein_coding		11	-1	100440928	1348
ENSMUSG00000024008	protein_coding	Cpne5	ENSMUST00000124917	processed_transcript		17	-1	29176656	612
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000154692	processed_transcript		11	-1	100431544	536
ENSMUSG00000043313	protein_coding	Pcdhb19	ENSMUST00000059571	protein_coding	principal1	18	1	37496991	7138
ENSMUSG00000024008	protein_coding	Cpne5	ENSMUST00000137727	protein_coding		17	-1	29237929	1144
ENSMUSG00000024008	protein_coding	Cpne5	ENSMUST00000126755	retained_intron		17	-1	29237712	7517
ENSMUSG00000043458	protein_coding	Pcdhb12	ENSMUST00000055495	protein_coding	principal1	18	1	37435621	3034
ENSMUSG00000035458	protein_coding	Tnni3	ENSMUST00000098859	protein_coding	principal1	7	-1	4522528	912
ENSMUSG00000017843	protein_coding	Ppp2r5c	ENSMUST00000084985	protein_coding	principal4	12	1	110485859	1847
ENSMUSG00000001017	protein_coding	Chtop	ENSMUST00000107343	protein_coding		3	-1	90509450	3118
ENSMUSG00000035458	protein_coding	Tnni3	ENSMUST00000126873	retained_intron		7	-1	4520567	451
ENSMUSG00000017843	protein_coding	Ppp2r5c	ENSMUST00000221074	protein_coding		12	1	110485859	1971
ENSMUSG00000025492	protein_coding	Ifitm3	ENSMUST00000026565	protein_coding	principal1	7	-1	141010770	678
ENSMUSG00000035458	protein_coding	Tnni3	ENSMUST00000140424	protein_coding		7	-1	4522794	601
ENSMUSG00000035458	protein_coding	Tnni3	ENSMUST00000154913	protein_coding		7	-1	4524229	548
ENSMUSG00000068115	protein_coding	Ninl	ENSMUST00000109896	protein_coding	principal1	2	-1	151009398	5093
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234579	nonsense_mediated_decay		17	-1	24886339	1445
ENSMUSG00000035458	protein_coding	Tnni3	ENSMUST00000209148	protein_coding		7	-1	4522427	569
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000140381	processed_transcript		11	-1	100440916	468
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000135557	processed_transcript		11	-1	100441073	373
ENSMUSG00000068115	protein_coding	Ninl	ENSMUST00000150036	processed_transcript		2	-1	150940909	541
ENSMUSG00000068115	protein_coding	Ninl	ENSMUST00000124135	protein_coding		2	-1	150952792	924
ENSMUSG00000035458	protein_coding	Tnni3	ENSMUST00000127736	retained_intron		7	-1	4522442	500
ENSMUSG00000024481	protein_coding	Lvrn	ENSMUST00000025358	protein_coding	principal1	18	1	46850038	5016
ENSMUSG00000035458	protein_coding	Tnni3	ENSMUST00000150166	retained_intron		7	-1	4522492	763
ENSMUSG00000030256	protein_coding	Bhlhe41	ENSMUST00000032386	protein_coding	principal1	6	-1	145865558	6133
ENSMUSG00000068115	protein_coding	Ninl	ENSMUST00000147293	retained_intron		2	-1	150953924	921
ENSMUSG00000085725	antisense	Gm15873	ENSMUST00000123390	antisense		7	1	4526536	761
ENSMUSG00000085725	antisense	Gm15873	ENSMUST00000205662	antisense		7	1	4526634	651
ENSMUSG00000068115	protein_coding	Ninl	ENSMUST00000150595	protein_coding		2	-1	150971080	768
ENSMUSG00000024481	protein_coding	Lvrn	ENSMUST00000234519	protein_coding		18	1	46850039	2053
ENSMUSG00000030256	protein_coding	Bhlhe41	ENSMUST00000111703	protein_coding		6	-1	145865302	744
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000140034	processed_transcript		11	-1	100441016	576
ENSMUSG00000102507	unprocessed_pseudogene	Gm21350	ENSMUST00000195678	unprocessed_pseudogene		Y	1	24894925	696
ENSMUSG00000113044	processed_pseudogene	Gm47149	ENSMUST00000221868	processed_pseudogene		13	-1	34680921	189
ENSMUSG00000113615	lincRNA	Gm47150	ENSMUST00000222361	lincRNA		13	1	34711449	463
ENSMUSG00000030256	protein_coding	Bhlhe41	ENSMUST00000203949	retained_intron		6	-1	145865352	690
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000155025	processed_transcript		11	-1	100440929	470
ENSMUSG00000108126	TEC	Gm43909	ENSMUST00000203443	TEC		6	1	145863297	1876
ENSMUSG00000102358	unprocessed_pseudogene	Gm21412	ENSMUST00000194618	unprocessed_pseudogene		Y	1	24969606	696
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000130666	processed_transcript		11	-1	100440927	598
ENSMUSG00000029822	protein_coding	Osbpl3	ENSMUST00000114468	protein_coding	principal3	6	-1	50382837	6494
ENSMUSG00000068115	protein_coding	Ninl	ENSMUST00000149268	processed_transcript		2	-1	150971214	757
ENSMUSG00000042909	protein_coding	Olfr648	ENSMUST00000216612	protein_coding	principal1	7	-1	104183392	2929
ENSMUSG00000042909	protein_coding	Olfr648	ENSMUST00000052659	protein_coding	principal1	7	-1	104180406	951
ENSMUSG00000029822	protein_coding	Osbpl3	ENSMUST00000141466	retained_intron		6	-1	50300354	3018
ENSMUSG00000068115	protein_coding	Ninl	ENSMUST00000128564	processed_transcript		2	-1	151009332	696
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000092688	protein_coding	principal1	11	-1	100441089	1399
ENSMUSG00000105870	TEC	7330423F06Rik	ENSMUST00000197499	TEC		5	1	8831147	301
ENSMUSG00000068115	protein_coding	Ninl	ENSMUST00000149979	processed_transcript		2	-1	151009376	617
ENSMUSG00000017176	protein_coding	Nt5c3b	ENSMUST00000107399	protein_coding		11	-1	100441089	1427
ENSMUSG00000097279	antisense	Gm5106	ENSMUST00000181058	antisense		5	-1	8798523	1334
ENSMUSG00000068115	protein_coding	Ninl	ENSMUST00000128627	protein_coding		2	-1	151039382	658
ENSMUSG00000029822	protein_coding	Osbpl3	ENSMUST00000090019	protein_coding	alternative1	6	-1	50370215	4039
ENSMUSG00000001017	protein_coding	Chtop	ENSMUST00000001043	protein_coding		3	-1	90509451	3257
ENSMUSG00000083320	processed_pseudogene	Gm13935	ENSMUST00000121859	processed_pseudogene		2	-1	110419619	798
ENSMUSG00000001017	protein_coding	Chtop	ENSMUST00000107344	protein_coding		3	-1	90509452	2972
ENSMUSG00000029822	protein_coding	Osbpl3	ENSMUST00000071728	protein_coding	alternative1	6	-1	50456170	3307
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234598	protein_coding		17	-1	24885617	1168
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234674	nonsense_mediated_decay		17	-1	24885914	1393
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000160835	protein_coding	principal3	14	-1	50930849	2755
ENSMUSG00000029822	protein_coding	Osbpl3	ENSMUST00000114466	protein_coding	alternative1	6	-1	50370318	2916
ENSMUSG00000050029	protein_coding	Rap2c	ENSMUST00000053593	protein_coding	principal1	X	-1	51018018	3545
ENSMUSG00000029320	protein_coding	1700016H13Rik	ENSMUST00000119824	protein_coding	principal1	5	-1	103656010	1447
ENSMUSG00000039623	protein_coding	Ap5z1	ENSMUST00000038699	protein_coding	principal2	5	1	142464054	3689
ENSMUSG00000047562	protein_coding	Mmp10	ENSMUST00000034488	protein_coding	principal1	9	1	7502352	1722
ENSMUSG00000025425	protein_coding	St8sia5	ENSMUST00000075290	protein_coding	alternative1	18	1	77185839	5432
ENSMUSG00000096685	protein_coding	Gm3642	ENSMUST00000166895	protein_coding	principal5	14	-1	6840311	1762
ENSMUSG00000096685	protein_coding	Gm3642	ENSMUST00000179296	protein_coding	alternative2	14	-1	6840306	618
ENSMUSG00000115546	antisense	Gm49077	ENSMUST00000228225	antisense		15	1	38518786	1266
ENSMUSG00000039623	protein_coding	Ap5z1	ENSMUST00000196405	retained_intron		5	1	142464061	4594
ENSMUSG00000055972	lincRNA	2810407A14Rik	ENSMUST00000069809	lincRNA		16	1	87784075	1699
ENSMUSG00000029320	protein_coding	1700016H13Rik	ENSMUST00000134926	protein_coding	principal1	5	-1	103655732	1104
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000106981	protein_coding	principal1	7	-1	101864145	960
ENSMUSG00000029822	protein_coding	Osbpl3	ENSMUST00000133141	retained_intron		6	-1	50382837	3218
ENSMUSG00000029822	protein_coding	Osbpl3	ENSMUST00000203907	protein_coding		6	-1	50351957	739
ENSMUSG00000039623	protein_coding	Ap5z1	ENSMUST00000196055	protein_coding	alternative2	5	1	142464074	2965
ENSMUSG00000055972	lincRNA	2810407A14Rik	ENSMUST00000189929	lincRNA		16	1	87787572	2172
ENSMUSG00000039623	protein_coding	Ap5z1	ENSMUST00000197293	retained_intron		5	1	142474099	579
ENSMUSG00000029822	protein_coding	Osbpl3	ENSMUST00000146341	protein_coding		6	-1	50456161	912
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000162957	protein_coding		14	-1	50930812	1465
ENSMUSG00000029822	protein_coding	Osbpl3	ENSMUST00000136926	protein_coding		6	-1	50397150	666
ENSMUSG00000059108	protein_coding	Ifitm6	ENSMUST00000209328	protein_coding	principal2	7	-1	141017924	678
ENSMUSG00000090404	protein_coding	Gm8362	ENSMUST00000168790	protein_coding	principal5	14	-1	6774353	1762
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000161166	protein_coding		14	-1	50930813	1445
ENSMUSG00000025425	protein_coding	St8sia5	ENSMUST00000079618	protein_coding	principal3	18	1	77185853	1989
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234597	protein_coding		17	-1	24885914	1434
ENSMUSG00000029822	protein_coding	Osbpl3	ENSMUST00000154333	processed_transcript		6	-1	50456201	654
ENSMUSG00000090404	protein_coding	Gm8362	ENSMUST00000170673	protein_coding	alternative2	14	-1	6774411	997
ENSMUSG00000028970	protein_coding	Abcb1b	ENSMUST00000199955	nonsense_mediated_decay		5	1	8798147	3181
ENSMUSG00000029320	protein_coding	1700016H13Rik	ENSMUST00000031261	nonsense_mediated_decay		5	-1	103655723	933
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000049312	protein_coding	alternative1	14	-1	50930856	1594
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234928	protein_coding		17	-1	24885951	1471
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234261	nonsense_mediated_decay		17	-1	24886315	1221
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234098	processed_transcript		17	-1	24886347	1440
ENSMUSG00000028970	protein_coding	Abcb1b	ENSMUST00000196580	nonsense_mediated_decay		5	1	8798153	690
ENSMUSG00000059108	protein_coding	Ifitm6	ENSMUST00000211330	protein_coding	alternative2	7	-1	141017558	813
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000159745	retained_intron		14	-1	50930851	3232
ENSMUSG00000025425	protein_coding	St8sia5	ENSMUST00000236592	processed_transcript		18	1	77255914	634
ENSMUSG00000082784	processed_pseudogene	Gm15957	ENSMUST00000118893	processed_pseudogene		18	-1	77219327	974
ENSMUSG00000096839	protein_coding	Gm3460	ENSMUST00000167882	protein_coding	principal5	14	-1	6622418	1809
ENSMUSG00000001017	protein_coding	Chtop	ENSMUST00000076639	protein_coding	alternative1	3	-1	90509462	1842
ENSMUSG00000096839	protein_coding	Gm3460	ENSMUST00000178927	protein_coding	alternative2	14	-1	6622355	618
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000161669	protein_coding		14	-1	50929209	356
ENSMUSG00000029320	protein_coding	1700016H13Rik	ENSMUST00000120108	protein_coding	principal1	5	-1	103655748	797
ENSMUSG00000073532	bidirectional_promoter_lncRNA	Gm7276	ENSMUST00000238080	bidirectional_promoter_lncRNA		18	-1	77186363	2095
ENSMUSG00000059108	protein_coding	Ifitm6	ENSMUST00000081924	protein_coding	principal2	7	-1	141016908	663
ENSMUSG00000073532	bidirectional_promoter_lncRNA	Gm7276	ENSMUST00000097520	bidirectional_promoter_lncRNA		18	-1	77186257	1252
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000041956	protein_coding	principal1	11	1	93996103	7340
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000160538	protein_coding		14	-1	50930803	877
ENSMUSG00000091814	protein_coding	Gm8050	ENSMUST00000171987	protein_coding	principal1	14	-1	6720251	1595
ENSMUSG00000109703	transcribed_processed_pseudogene	Gm45299	ENSMUST00000211011	processed_transcript		7	1	141051589	765
ENSMUSG00000001017	protein_coding	Chtop	ENSMUST00000049937	protein_coding	principal4	3	-1	90509498	2012
ENSMUSG00000029320	protein_coding	1700016H13Rik	ENSMUST00000154408	nonsense_mediated_decay		5	-1	103655723	663
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000156019	protein_coding		11	1	94043570	2324
ENSMUSG00000109703	transcribed_processed_pseudogene	Gm45299	ENSMUST00000210199	transcribed_processed_pseudogene		7	1	141051775	420
ENSMUSG00000029320	protein_coding	1700016H13Rik	ENSMUST00000120688	protein_coding	principal1	5	-1	103655723	612
ENSMUSG00000001017	protein_coding	Chtop	ENSMUST00000107346	protein_coding	alternative1	3	-1	90509474	1321
ENSMUSG00000090691	protein_coding	Gm3667	ENSMUST00000171906	protein_coding	principal1	14	-1	6889962	2053
ENSMUSG00000029343	protein_coding	Crybb1	ENSMUST00000031286	protein_coding	principal1	5	1	112255815	882
ENSMUSG00000043461	protein_coding	Sptssb	ENSMUST00000051239	protein_coding	principal1	3	-1	69859940	1795
ENSMUSG00000029320	protein_coding	1700016H13Rik	ENSMUST00000154096	nonsense_mediated_decay		5	-1	103655724	609
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000132079	protein_coding		11	1	94044118	2365
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000127066	processed_transcript		11	1	94044190	803
ENSMUSG00000001017	protein_coding	Chtop	ENSMUST00000107342	protein_coding		3	-1	90509485	2411
ENSMUSG00000097901	processed_transcript	Gm26680	ENSMUST00000180944	processed_transcript		14	1	6684255	676
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000103168	protein_coding		11	1	94044268	6840
ENSMUSG00000097901	processed_transcript	Gm26680	ENSMUST00000181013	processed_transcript		14	1	6684268	1293
ENSMUSG00000001017	protein_coding	Chtop	ENSMUST00000146740	protein_coding		3	-1	90509476	889
ENSMUSG00000021090	protein_coding	Lrrc9	ENSMUST00000162159	protein_coding	principal1	12	1	72441866	4739
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000163088	retained_intron		14	-1	50930833	762
ENSMUSG00000001017	protein_coding	Chtop	ENSMUST00000131868	protein_coding		3	-1	90509022	637
ENSMUSG00000029343	protein_coding	Crybb1	ENSMUST00000131673	protein_coding		5	1	112255845	827
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000159047	retained_intron		14	-1	50929763	321
ENSMUSG00000029343	protein_coding	Crybb1	ENSMUST00000112375	protein_coding	principal1	5	1	112255874	793
ENSMUSG00000097901	processed_transcript	Gm26680	ENSMUST00000181701	processed_transcript		14	1	6684275	2078
ENSMUSG00000097901	processed_transcript	Gm26680	ENSMUST00000181787	processed_transcript		14	1	6684275	677
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000162935	retained_intron		14	-1	50930838	829
ENSMUSG00000035953	protein_coding	Pip4p1	ENSMUST00000163043	retained_intron		14	-1	50930800	735
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000138154	processed_transcript		11	1	94071663	2167
ENSMUSG00000093898	protein_coding	Gm3629	ENSMUST00000171706	protein_coding	principal1	14	-1	6590613	1756
ENSMUSG00000043461	protein_coding	Sptssb	ENSMUST00000171529	protein_coding	principal1	3	-1	69859922	772
ENSMUSG00000096927	processed_pseudogene	Gm3466	ENSMUST00000181797	processed_pseudogene		14	1	6690690	1192
ENSMUSG00000115324	bidirectional_promoter_lncRNA	4930527F14Rik	ENSMUST00000228591	bidirectional_promoter_lncRNA		14	1	45530358	721
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000153076	protein_coding		11	1	94082788	5954
ENSMUSG00000094590	protein_coding	Gm10251	ENSMUST00000181786	protein_coding	principal1	14	-1	6684170	1688
ENSMUSG00000081250	processed_pseudogene	Gm15554	ENSMUST00000120406	processed_pseudogene		16	-1	75773057	895
ENSMUSG00000094590	protein_coding	Gm10251	ENSMUST00000178788	protein_coding	principal1	14	-1	6675884	384
ENSMUSG00000023912	protein_coding	Slc25a27	ENSMUST00000024705	protein_coding	principal1	17	-1	43667214	2895
ENSMUSG00000057706	protein_coding	Mex3b	ENSMUST00000082237	protein_coding	principal1	7	1	82867333	3355
ENSMUSG00000115324	bidirectional_promoter_lncRNA	4930527F14Rik	ENSMUST00000226815	bidirectional_promoter_lncRNA		14	1	45543675	526
ENSMUSG00000104346	protein_coding	Pcdhga3	ENSMUST00000073447	protein_coding	principal1	18	1	37674307	4720
ENSMUSG00000038888	protein_coding	Ctu1	ENSMUST00000038332	protein_coding	principal1	7	1	43672016	2475
ENSMUSG00000023912	protein_coding	Slc25a27	ENSMUST00000233442	protein_coding		17	-1	43667132	1273
ENSMUSG00000100717	lincRNA	1700120G07Rik	ENSMUST00000190881	lincRNA		7	-1	135196002	885
ENSMUSG00000091754	protein_coding	Gm3636	ENSMUST00000163850	protein_coding	alternative2	14	-1	6742332	1746
ENSMUSG00000115324	bidirectional_promoter_lncRNA	4930527F14Rik	ENSMUST00000227827	bidirectional_promoter_lncRNA		14	1	45543683	762
ENSMUSG00000115702	transcribed_processed_pseudogene	Gm5206	ENSMUST00000228149	transcribed_processed_pseudogene		14	-1	45558173	594
ENSMUSG00000115702	transcribed_processed_pseudogene	Gm5206	ENSMUST00000226429	processed_transcript		14	-1	45558330	702
ENSMUSG00000100717	lincRNA	1700120G07Rik	ENSMUST00000187267	lincRNA		7	-1	135196002	386
ENSMUSG00000091754	protein_coding	Gm3636	ENSMUST00000100904	protein_coding	principal2	14	-1	6741430	519
ENSMUSG00000115846	lincRNA	Gm41144	ENSMUST00000228455	lincRNA		14	-1	45543567	1088
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000075695	protein_coding		11	1	94044205	6910
ENSMUSG00000103081	polymorphic_pseudogene	Pcdhgb8	ENSMUST00000195764	polymorphic_pseudogene	principal1	18	1	37761801	4615
ENSMUSG00000115391	lincRNA	Gm49123	ENSMUST00000228939	lincRNA		14	-1	45554402	1035
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000092777	protein_coding		11	1	94044205	6913
ENSMUSG00000078249	protein_coding	Hmga1b	ENSMUST00000105046	protein_coding	principal1	11	1	120762794	1626
ENSMUSG00000103472	protein_coding	Pcdhga7	ENSMUST00000192511	protein_coding	principal2	18	1	37714764	4730
ENSMUSG00000078249	protein_coding	Hmga1b	ENSMUST00000178955	protein_coding		11	1	120763643	120
ENSMUSG00000103472	protein_coding	Pcdhga7	ENSMUST00000193476	protein_coding	alternative2	18	1	37714818	3044
ENSMUSG00000082556	processed_pseudogene	Gm5387	ENSMUST00000119776	processed_pseudogene		X	1	51043963	857
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000044252	protein_coding	principal1	17	-1	24886348	1427
ENSMUSG00000099872	lincRNA	1700074H08Rik	ENSMUST00000189831	lincRNA		13	1	119680040	555
ENSMUSG00000103456	antisense	Gm38097	ENSMUST00000192936	antisense		18	-1	37172564	439
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234968	protein_coding		17	-1	24886333	1502
ENSMUSG00000083618	unprocessed_pseudogene	Gm11771	ENSMUST00000118124	unprocessed_pseudogene		11	1	120765310	732
ENSMUSG00000082455	processed_pseudogene	Gm13665	ENSMUST00000120830	processed_pseudogene		2	1	73116748	528
ENSMUSG00000044899	protein_coding	Olfr649	ENSMUST00000106859	protein_coding	principal1	7	-1	104195985	1382
ENSMUSG00000044899	protein_coding	Olfr649	ENSMUST00000060440	protein_coding	principal1	7	-1	104190205	939
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000106982	protein_coding	principal1	7	-1	101867407	1039
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234352	nonsense_mediated_decay		17	-1	24886349	1224
ENSMUSG00000081859	polymorphic_pseudogene	Olfr650-ps1	ENSMUST00000121432	polymorphic_pseudogene	principal1	7	1	104203437	2321
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234293	nonsense_mediated_decay		17	-1	24886329	1191
ENSMUSG00000051316	protein_coding	Taf7	ENSMUST00000066272	protein_coding	principal1	18	-1	37644204	3302
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234489	nonsense_mediated_decay		17	-1	24886320	1423
ENSMUSG00000040675	protein_coding	Mthfd1l	ENSMUST00000117291	protein_coding	principal1	10	1	3973118	3669
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234583	protein_coding		17	-1	24886329	899
ENSMUSG00000067604	protein_coding	Nms	ENSMUST00000088029	protein_coding	principal1	1	1	38939149	1001
ENSMUSG00000103677	protein_coding	Pcdhga4	ENSMUST00000194418	protein_coding	principal1	18	1	37685210	4727
ENSMUSG00000106453	processed_pseudogene	Gm9273	ENSMUST00000200606	processed_pseudogene		3	-1	104418327	715
ENSMUSG00000040675	protein_coding	Mthfd1l	ENSMUST00000043735	protein_coding	principal1	10	1	3973144	3535
ENSMUSG00000103677	protein_coding	Pcdhga4	ENSMUST00000195163	protein_coding		18	1	37686884	797
ENSMUSG00000067604	protein_coding	Nms	ENSMUST00000160214	protein_coding		1	1	38939203	497
ENSMUSG00000015090	protein_coding	Ptgds	ENSMUST00000114251	protein_coding	principal1	2	-1	25470046	830
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000235055	nonsense_mediated_decay		17	-1	24886338	950
ENSMUSG00000032913	protein_coding	Lrig2	ENSMUST00000199180	protein_coding		3	-1	104461511	383
ENSMUSG00000039183	protein_coding	Nubp2	ENSMUST00000234915	retained_intron		17	-1	24886307	649
ENSMUSG00000051663	protein_coding	Pcdhb1	ENSMUST00000052366	protein_coding	principal1	18	1	37264938	2588
ENSMUSG00000028970	protein_coding	Abcb1b	ENSMUST00000009058	protein_coding	principal1	5	1	8798186	4306
ENSMUSG00000081447	processed_pseudogene	Gm13870	ENSMUST00000117214	processed_pseudogene		2	1	104537437	1023
ENSMUSG00000040675	protein_coding	Mthfd1l	ENSMUST00000120585	protein_coding	principal1	10	1	3973131	3687
ENSMUSG00000103601	unprocessed_pseudogene	Gm18150	ENSMUST00000195341	unprocessed_pseudogene		18	1	37013848	645
ENSMUSG00000020859	protein_coding	Spag9	ENSMUST00000024979	protein_coding		11	1	94044365	6756
ENSMUSG00000103309	antisense	BC037039	ENSMUST00000192003	antisense		18	-1	37807922	2205
ENSMUSG00000081604	processed_pseudogene	Gm11518	ENSMUST00000118048	processed_pseudogene		11	-1	94037628	411
ENSMUSG00000028970	protein_coding	Abcb1b	ENSMUST00000199546	retained_intron		5	1	8825290	654
ENSMUSG00000005800	protein_coding	Mmp8	ENSMUST00000018765	protein_coding	principal1	9	1	7558456	2425
ENSMUSG00000090637	processed_pseudogene	Gm6189	ENSMUST00000164487	processed_pseudogene		1	-1	80385185	2082
ENSMUSG00000028970	protein_coding	Abcb1b	ENSMUST00000197961	processed_transcript		5	1	8840361	735
ENSMUSG00000028970	protein_coding	Abcb1b	ENSMUST00000196819	retained_intron		5	1	8849333	489
ENSMUSG00000067071	protein_coding	Hes6	ENSMUST00000132188	retained_intron		1	-1	91413208	1398
ENSMUSG00000101722	lincRNA	Gm29125	ENSMUST00000187121	lincRNA		1	1	80382822	3220
ENSMUSG00000040675	protein_coding	Mthfd1l	ENSMUST00000154517	processed_transcript		10	1	4032280	690
ENSMUSG00000028970	protein_coding	Abcb1b	ENSMUST00000199994	retained_intron		5	1	8851387	584
ENSMUSG00000082247	processed_pseudogene	Gm16074	ENSMUST00000119524	processed_pseudogene		10	1	3992371	444
ENSMUSG00000073590	lincRNA	3222401L13Rik	ENSMUST00000192137	lincRNA		18	1	37655451	6292
ENSMUSG00000028970	protein_coding	Abcb1b	ENSMUST00000198650	protein_coding		5	1	8851592	613
ENSMUSG00000073590	lincRNA	3222401L13Rik	ENSMUST00000097608	lincRNA		18	1	37655907	2831
ENSMUSG00000028970	protein_coding	Abcb1b	ENSMUST00000196048	retained_intron		5	1	8851860	3026
ENSMUSG00000015090	protein_coding	Ptgds	ENSMUST00000144016	retained_intron		2	-1	25469383	1327
ENSMUSG00000103977	lincRNA	Gm37071	ENSMUST00000195814	lincRNA		Y	-1	25080578	1498
ENSMUSG00000015090	protein_coding	Ptgds	ENSMUST00000137417	processed_transcript		2	-1	25469157	645
ENSMUSG00000103977	lincRNA	Gm37071	ENSMUST00000194669	lincRNA		Y	-1	25080125	621
ENSMUSG00000103977	lincRNA	Gm37071	ENSMUST00000191924	lincRNA		Y	-1	25080125	437
ENSMUSG00000001674	protein_coding	Ddx18	ENSMUST00000001724	protein_coding	principal1	1	-1	121567989	2258
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000120071	protein_coding		8	-1	67818295	9203
ENSMUSG00000030655	protein_coding	Smg1	ENSMUST00000032891	protein_coding	principal1	7	-1	118243637	15557
ENSMUSG00000015090	protein_coding	Ptgds	ENSMUST00000015234	protein_coding	principal1	2	-1	25469842	901
ENSMUSG00000067071	protein_coding	Hes6	ENSMUST00000086851	protein_coding	principal1	1	-1	91413222	1335
ENSMUSG00000001674	protein_coding	Ddx18	ENSMUST00000148809	retained_intron		1	-1	121559215	622
ENSMUSG00000001674	protein_coding	Ddx18	ENSMUST00000134417	protein_coding		1	-1	121560271	512
ENSMUSG00000035960	protein_coding	Apex1	ENSMUST00000049411	protein_coding	principal1	14	1	50924968	1239
ENSMUSG00000005656	protein_coding	Snx6	ENSMUST00000005798	protein_coding	principal1	12	-1	54795703	1928
ENSMUSG00000026078	protein_coding	Pdcl3	ENSMUST00000027247	protein_coding	principal1	1	1	38985608	3914
ENSMUSG00000114302	antisense	Gm48683	ENSMUST00000223977	antisense		19	1	3527104	695
ENSMUSG00000015090	protein_coding	Ptgds	ENSMUST00000114259	protein_coding	principal1	2	-1	25469749	775
ENSMUSG00000035960	protein_coding	Apex1	ENSMUST00000136753	protein_coding		14	1	50924969	655
ENSMUSG00000001674	protein_coding	Ddx18	ENSMUST00000131471	processed_transcript		1	-1	121567722	451
ENSMUSG00000021090	protein_coding	Lrrc9	ENSMUST00000161195	retained_intron		12	1	72441933	3750
ENSMUSG00000037106	protein_coding	Fer1l6	ENSMUST00000161028	protein_coding	principal1	15	1	58510048	5714
ENSMUSG00000035960	protein_coding	Apex1	ENSMUST00000154288	protein_coding		14	1	50924978	935
ENSMUSG00000026078	protein_coding	Pdcl3	ENSMUST00000193489	nonsense_mediated_decay		1	1	38987841	330
ENSMUSG00000021090	protein_coding	Lrrc9	ENSMUST00000162179	retained_intron		12	1	72441949	2413
ENSMUSG00000035960	protein_coding	Apex1	ENSMUST00000128395	protein_coding		14	1	50925285	1036
ENSMUSG00000067071	protein_coding	Hes6	ENSMUST00000126136	retained_intron		1	-1	91413222	1573
ENSMUSG00000026078	protein_coding	Pdcl3	ENSMUST00000194552	protein_coding		1	1	38987865	643
ENSMUSG00000037106	protein_coding	Fer1l6	ENSMUST00000159705	processed_transcript		15	1	58638505	714
ENSMUSG00000021090	protein_coding	Lrrc9	ENSMUST00000221360	nonsense_mediated_decay		12	1	72442035	4597
ENSMUSG00000005656	protein_coding	Snx6	ENSMUST00000218934	protein_coding		12	-1	54795482	1441
ENSMUSG00000067071	protein_coding	Hes6	ENSMUST00000155752	retained_intron		1	-1	91413208	607
ENSMUSG00000026078	protein_coding	Pdcl3	ENSMUST00000193073	retained_intron		1	1	38995160	944
ENSMUSG00000005656	protein_coding	Snx6	ENSMUST00000219722	retained_intron		12	-1	54760483	286
ENSMUSG00000021090	protein_coding	Lrrc9	ENSMUST00000160394	retained_intron		12	1	72442242	1527
ENSMUSG00000037106	protein_coding	Fer1l6	ENSMUST00000159177	retained_intron		15	1	58648505	2776
ENSMUSG00000067071	protein_coding	Hes6	ENSMUST00000150520	processed_transcript		1	-1	91414038	372
ENSMUSG00000005656	protein_coding	Snx6	ENSMUST00000219781	nonsense_mediated_decay		12	-1	54795664	436
ENSMUSG00000091373	unprocessed_pseudogene	Gm8810	ENSMUST00000172895	unprocessed_pseudogene		17	-1	36067753	754
ENSMUSG00000103046	TEC	Gm37309	ENSMUST00000194994	TEC		1	1	38992678	1639
ENSMUSG00000082379	processed_pseudogene	Gm13884	ENSMUST00000118103	processed_pseudogene		2	1	104556661	829
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000106986	protein_coding	principal1	7	-1	101870683	1286
ENSMUSG00000021090	protein_coding	Lrrc9	ENSMUST00000161957	retained_intron		12	1	72442249	2520
ENSMUSG00000097991	processed_pseudogene	Gm7656	ENSMUST00000182468	processed_pseudogene		7	1	70490848	1004
ENSMUSG00000005656	protein_coding	Snx6	ENSMUST00000218337	retained_intron		12	-1	54770982	404
ENSMUSG00000106227	lincRNA	Gm43464	ENSMUST00000198003	lincRNA		3	1	100692706	317
ENSMUSG00000021090	protein_coding	Lrrc9	ENSMUST00000161547	retained_intron		12	1	72476074	548
ENSMUSG00000005656	protein_coding	Snx6	ENSMUST00000218066	processed_transcript		12	-1	54795484	228
ENSMUSG00000021090	protein_coding	Lrrc9	ENSMUST00000220791	protein_coding		12	1	72495667	1449
ENSMUSG00000020493	protein_coding	Prr11	ENSMUST00000051395	protein_coding	principal1	11	-1	87108708	3824
ENSMUSG00000005656	protein_coding	Snx6	ENSMUST00000219302	retained_intron		12	-1	54795652	732
ENSMUSG00000078713	protein_coding	Tomm5	ENSMUST00000107810	protein_coding	principal1	4	-1	45108114	639
ENSMUSG00000021090	protein_coding	Lrrc9	ENSMUST00000221282	processed_transcript		12	1	72520091	819
ENSMUSG00000021090	protein_coding	Lrrc9	ENSMUST00000161284	protein_coding		12	1	72441866	3817
ENSMUSG00000005656	protein_coding	Snx6	ENSMUST00000219865	retained_intron		12	-1	54795687	367
ENSMUSG00000020415	protein_coding	Pttg1	ENSMUST00000020687	protein_coding	principal1	11	-1	43426251	741
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000106985	protein_coding	principal1	7	-1	101870707	1313
ENSMUSG00000027313	protein_coding	Chac1	ENSMUST00000028780	protein_coding	principal1	2	1	119351229	1637
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000090052	protein_coding	principal3	16	1	20141063	5997
ENSMUSG00000078713	protein_coding	Tomm5	ENSMUST00000107809	protein_coding		4	-1	45108038	738
ENSMUSG00000001865	protein_coding	Cpa3	ENSMUST00000001921	protein_coding	principal1	3	-1	20242181	1449
ENSMUSG00000078713	protein_coding	Tomm5	ENSMUST00000107808	protein_coding		4	-1	45108108	679
ENSMUSG00000073804	protein_coding	Nps	ENSMUST00000210907	protein_coding		7	1	135258703	1206
ENSMUSG00000040794	protein_coding	C1qtnf4	ENSMUST00000111466	protein_coding	principal1	2	1	90885860	1290
ENSMUSG00000073804	protein_coding	Nps	ENSMUST00000210697	protein_coding		7	1	135268508	1082
ENSMUSG00000001865	protein_coding	Cpa3	ENSMUST00000191659	processed_transcript		3	-1	20240747	398
ENSMUSG00000078713	protein_coding	Tomm5	ENSMUST00000107807	protein_coding		4	-1	45108108	442
ENSMUSG00000020415	protein_coding	Pttg1	ENSMUST00000117446	protein_coding		11	-1	43425981	1674
ENSMUSG00000073804	protein_coding	Nps	ENSMUST00000097983	protein_coding	principal1	7	1	135268639	840
ENSMUSG00000037458	protein_coding	Azin1	ENSMUST00000065308	protein_coding	principal1	15	-1	38519266	4871
ENSMUSG00000020415	protein_coding	Pttg1	ENSMUST00000140434	protein_coding		11	-1	43422986	476
ENSMUSG00000001707	protein_coding	Eef1e1	ENSMUST00000001757	protein_coding	principal1	13	-1	38659058	2553
ENSMUSG00000020415	protein_coding	Pttg1	ENSMUST00000101340	protein_coding	principal1	11	-1	43426202	700
ENSMUSG00000051076	protein_coding	Vtcn1	ENSMUST00000054791	protein_coding	principal1	3	1	100825459	2622
ENSMUSG00000040563	protein_coding	Plppr2	ENSMUST00000046371	protein_coding	principal3	9	1	21937033	2626
ENSMUSG00000020415	protein_coding	Pttg1	ENSMUST00000118368	protein_coding	principal1	11	-1	43426217	696
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000115560	protein_coding	alternative2	16	1	20141067	6112
ENSMUSG00000001707	protein_coding	Eef1e1	ENSMUST00000223823	retained_intron		13	-1	38658955	822
ENSMUSG00000089653	antisense	Gm15841	ENSMUST00000160540	antisense		1	1	74902371	517
ENSMUSG00000020415	protein_coding	Pttg1	ENSMUST00000121638	protein_coding	principal1	11	-1	43425963	948
ENSMUSG00000028212	protein_coding	Ccne2	ENSMUST00000145430	processed_transcript		4	1	11191351	418
ENSMUSG00000030655	protein_coding	Smg1	ENSMUST00000179331	nonsense_mediated_decay		7	-1	118212970	12147
ENSMUSG00000037458	protein_coding	Azin1	ENSMUST00000110329	protein_coding	principal1	15	-1	38519263	4217
ENSMUSG00000020415	protein_coding	Pttg1	ENSMUST00000152115	nonsense_mediated_decay		11	-1	43425981	954
ENSMUSG00000030655	protein_coding	Smg1	ENSMUST00000207162	processed_transcript		7	-1	118135825	447
ENSMUSG00000001707	protein_coding	Eef1e1	ENSMUST00000224487	retained_intron		13	-1	38659010	533
ENSMUSG00000020415	protein_coding	Pttg1	ENSMUST00000020685	protein_coding		11	-1	43426227	634
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000039173	protein_coding	principal3	1	1	105663883	4328
ENSMUSG00000030655	protein_coding	Smg1	ENSMUST00000178025	protein_coding		7	-1	118141799	785
ENSMUSG00000028212	protein_coding	Ccne2	ENSMUST00000144438	processed_transcript		4	1	11191709	535
ENSMUSG00000020415	protein_coding	Pttg1	ENSMUST00000150726	processed_transcript		11	-1	43426118	534
ENSMUSG00000030655	protein_coding	Smg1	ENSMUST00000208025	retained_intron		7	-1	118159264	1460
ENSMUSG00000030655	protein_coding	Smg1	ENSMUST00000208930	retained_intron		7	-1	118192291	1534
ENSMUSG00000020415	protein_coding	Pttg1	ENSMUST00000148130	retained_intron		11	-1	43426213	388
ENSMUSG00000040563	protein_coding	Plppr2	ENSMUST00000190387	protein_coding	alternative1	9	1	21938274	2608
ENSMUSG00000113822	lincRNA	Gm47151	ENSMUST00000222734	lincRNA		13	-1	34720751	596
ENSMUSG00000113457	lincRNA	Gm47152	ENSMUST00000222865	lincRNA		13	1	34720682	875
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000086721	protein_coding	alternative2	1	1	105663913	5414
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000106983	protein_coding	principal1	7	-1	101870788	1307
ENSMUSG00000040563	protein_coding	Plppr2	ENSMUST00000188468	protein_coding		9	1	21938453	1480
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000140068	protein_coding		7	-1	101869551	883
ENSMUSG00000067525	protein_coding	Olfr1427	ENSMUST00000216069	protein_coding	principal1	19	-1	12103334	1863
ENSMUSG00000067525	protein_coding	Olfr1427	ENSMUST00000215374	protein_coding	principal1	19	-1	12103334	3342
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000232172	retained_intron		16	1	20141093	5671
ENSMUSG00000067525	protein_coding	Olfr1427	ENSMUST00000216845	processed_transcript		19	-1	12103334	1286
ENSMUSG00000024610	protein_coding	Cd74	ENSMUST00000237097	retained_intron		18	1	60803848	639
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000190501	protein_coding	alternative2	1	1	105663923	3852
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000231705	protein_coding		16	1	20141564	772
ENSMUSG00000067525	protein_coding	Olfr1427	ENSMUST00000087825	protein_coding	principal1	19	-1	12099639	938
ENSMUSG00000037458	protein_coding	Azin1	ENSMUST00000129589	nonsense_mediated_decay		15	-1	38519169	4109
ENSMUSG00000030655	protein_coding	Smg1	ENSMUST00000208209	retained_intron		7	-1	118243623	2287
ENSMUSG00000117630	processed_pseudogene	Gm49973	ENSMUST00000234575	processed_pseudogene		18	-1	46908925	368
ENSMUSG00000040972	protein_coding	Igsf21	ENSMUST00000039331	protein_coding	principal1	4	-1	140246784	1979
ENSMUSG00000037458	protein_coding	Azin1	ENSMUST00000226152	retained_intron		15	-1	38494386	591
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000191150	processed_transcript		1	1	105663937	874
ENSMUSG00000030655	protein_coding	Smg1	ENSMUST00000180009	retained_intron		7	-1	118243637	3630
ENSMUSG00000037458	protein_coding	Azin1	ENSMUST00000149293	retained_intron		15	-1	38497388	1228
ENSMUSG00000085968	antisense	Gm13027	ENSMUST00000135858	antisense		4	1	140131877	241
ENSMUSG00000086164	antisense	Gm13029	ENSMUST00000137283	antisense		4	1	140142873	594
ENSMUSG00000030655	protein_coding	Smg1	ENSMUST00000179047	protein_coding		7	-1	118243670	1516
ENSMUSG00000037458	protein_coding	Azin1	ENSMUST00000110328	nonsense_mediated_decay		15	-1	38500364	575
ENSMUSG00000030655	protein_coding	Smg1	ENSMUST00000179847	retained_intron		7	-1	118243349	3911
ENSMUSG00000037458	protein_coding	Azin1	ENSMUST00000151319	protein_coding		15	-1	38518162	747
ENSMUSG00000109045	TEC	Gm45084	ENSMUST00000207096	TEC		7	-1	118231357	1957
ENSMUSG00000110100	protein_coding	Gm45261	ENSMUST00000211023	protein_coding	principal1	1	-1	80461448	594
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000151706	protein_coding		7	-1	101870714	827
ENSMUSG00000037458	protein_coding	Azin1	ENSMUST00000127848	protein_coding		15	-1	38518221	655
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000191293	retained_intron		1	1	105664441	5109
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000126204	protein_coding		7	-1	101870786	828
ENSMUSG00000037458	protein_coding	Azin1	ENSMUST00000152833	processed_transcript		15	-1	38519250	622
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000185692	nonsense_mediated_decay		1	1	105696590	3720
ENSMUSG00000110441	lincRNA	Gm45790	ENSMUST00000211986	lincRNA		3	-1	85466128	1629
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000134145	protein_coding		7	-1	101869324	641
ENSMUSG00000105840	processed_pseudogene	Gm6073	ENSMUST00000198253	processed_pseudogene		3	-1	53667328	466
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000188969	retained_intron		1	1	105703759	555
ENSMUSG00000101483	antisense	1700016L21Rik	ENSMUST00000187497	antisense		1	1	80445932	394
ENSMUSG00000105227	lincRNA	Gm36667	ENSMUST00000196125	lincRNA		5	-1	133598406	753
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000123630	protein_coding		7	-1	101870788	667
ENSMUSG00000039611	protein_coding	Tmem246	ENSMUST00000042750	protein_coding	principal1	4	-1	49597876	2989
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000232338	nonsense_mediated_decay		16	1	20152911	4405
ENSMUSG00000101483	antisense	1700016L21Rik	ENSMUST00000189139	antisense		1	1	80445940	629
ENSMUSG00000105879	processed_pseudogene	Gm6204	ENSMUST00000198872	processed_pseudogene		3	-1	53692878	457
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000185750	retained_intron		1	1	105730814	530
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000123321	protein_coding		7	-1	101869018	350
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000190459	retained_intron		1	1	105740212	809
ENSMUSG00000026319	protein_coding	Relch	ENSMUST00000188588	retained_intron		1	1	105740980	743
ENSMUSG00000103107	TEC	Gm9867	ENSMUST00000192212	TEC		4	-1	140323302	2647
ENSMUSG00000017311	protein_coding	Pyy	ENSMUST00000177304	protein_coding	alternative2	11	-1	102107822	551
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000232019	protein_coding		16	1	20152911	4559
ENSMUSG00000039611	protein_coding	Tmem246	ENSMUST00000150664	protein_coding		4	-1	49597470	748
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000155311	protein_coding		7	-1	101870787	580
ENSMUSG00000104044	TEC	Gm37566	ENSMUST00000192363	TEC		1	1	105708573	4355
ENSMUSG00000039611	protein_coding	Tmem246	ENSMUST00000151542	protein_coding		4	-1	49593890	254
ENSMUSG00000105168	lincRNA	Gm30735	ENSMUST00000199488	lincRNA		3	1	53725477	726
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000150184	protein_coding		7	-1	101868667	404
ENSMUSG00000105444	TEC	Gm10727	ENSMUST00000197107	TEC		3	1	53736225	1602
ENSMUSG00000102440	protein_coding	Pcdhga9	ENSMUST00000091935	protein_coding	principal1	18	1	37736936	4724
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000140584	protein_coding		7	-1	101869322	331
ENSMUSG00000078507	protein_coding	Aadacl3	ENSMUST00000105749	protein_coding	principal1	4	-1	144463756	3153
ENSMUSG00000087084	lincRNA	Gm13016	ENSMUST00000126252	lincRNA		4	1	140380630	1720
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000124026	protein_coding		7	-1	101870584	601
ENSMUSG00000067524	protein_coding	Olfr1428	ENSMUST00000208391	protein_coding		19	-1	12115823	1368
ENSMUSG00000102440	protein_coding	Pcdhga9	ENSMUST00000194814	retained_intron		18	1	37737369	3037
ENSMUSG00000001827	protein_coding	Folr1	ENSMUST00000125298	processed_transcript		7	-1	101870101	299
ENSMUSG00000106270	lincRNA	C820005J03Rik	ENSMUST00000195997	lincRNA		3	1	53756731	2312
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000093469	protein_coding	alternative2	8	-1	67974574	4351
ENSMUSG00000086960	lincRNA	Gm13017	ENSMUST00000156409	lincRNA		4	1	140391148	400
ENSMUSG00000067524	protein_coding	Olfr1428	ENSMUST00000214103	protein_coding	principal1	19	-1	12115897	2127
ENSMUSG00000106067	processed_pseudogene	Gm7902	ENSMUST00000198842	processed_pseudogene		5	-1	133842519	947
ENSMUSG00000082835	processed_pseudogene	Gm13118	ENSMUST00000120402	processed_pseudogene		4	-1	144498948	549
ENSMUSG00000067524	protein_coding	Olfr1428	ENSMUST00000087824	protein_coding	principal1	19	-1	12109544	945
ENSMUSG00000085913	antisense	Gm15601	ENSMUST00000226558	antisense		14	1	45563834	679
ENSMUSG00000118540	unprocessed_pseudogene	AL607073.1	ENSMUST00000239038	unprocessed_pseudogene		4	1	144493880	873
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000093468	protein_coding	principal3	8	-1	67910932	1739
ENSMUSG00000102312	protein_coding	Pcdha3	ENSMUST00000192503	protein_coding	principal1	18	1	36946105	5332
ENSMUSG00000085913	antisense	Gm15601	ENSMUST00000122972	antisense		14	1	45587740	4033
ENSMUSG00000104893	processed_pseudogene	Gm2404	ENSMUST00000196197	processed_pseudogene		5	-1	133920002	844
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000232054	retained_intron		16	1	20158948	471
ENSMUSG00000106800	TEC	1700030N18Rik	ENSMUST00000202497	TEC		5	-1	134091451	966
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000231861	retained_intron		16	1	20185916	665
ENSMUSG00000045876	protein_coding	Pcdhb8	ENSMUST00000192867	protein_coding		18	1	37355121	462
ENSMUSG00000086437	lincRNA	Gm13021	ENSMUST00000135716	lincRNA		4	1	140422524	407
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000231795	retained_intron		16	1	20192966	719
ENSMUSG00000017311	protein_coding	Pyy	ENSMUST00000017455	protein_coding	principal3	11	-1	102107832	555
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000212505	protein_coding	alternative2	8	-1	68062227	3253
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000231671	processed_transcript		16	1	20195154	455
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000212960	protein_coding	alternative2	8	-1	68206057	4562
ENSMUSG00000087344	lincRNA	Gm15627	ENSMUST00000140421	lincRNA		5	-1	134099208	437
ENSMUSG00000103998	lincRNA	Gm38025	ENSMUST00000193926	lincRNA		3	1	31341012	2308
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000232094	retained_intron		16	1	20207363	728
ENSMUSG00000045876	protein_coding	Pcdhb8	ENSMUST00000051163	protein_coding	principal1	18	1	37355271	3334
ENSMUSG00000073568	protein_coding	Arl14epl	ENSMUST00000234910	protein_coding	principal1	18	1	46921815	2257
ENSMUSG00000017311	protein_coding	Pyy	ENSMUST00000127381	protein_coding	alternative2	11	-1	102107416	529
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000232613	nonsense_mediated_decay		16	1	20213265	563
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000059374	protein_coding		8	-1	67818233	2876
ENSMUSG00000017311	protein_coding	Pyy	ENSMUST00000177149	retained_intron		11	-1	102107832	376
ENSMUSG00000073568	protein_coding	Arl14epl	ENSMUST00000097580	protein_coding	principal1	18	1	46925982	2169
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000232671	retained_intron		16	1	20222756	714
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000209334	protein_coding		7	1	101863715	251
ENSMUSG00000103549	processed_pseudogene	Gm17895	ENSMUST00000194028	processed_pseudogene		3	-1	69955682	874
ENSMUSG00000109891	lincRNA	Gm45339	ENSMUST00000210823	lincRNA		7	-1	135277146	877
ENSMUSG00000097330	processed_transcript	Gm26672	ENSMUST00000180931	antisense		18	-1	37755954	3602
ENSMUSG00000041215	protein_coding	Yeats2	ENSMUST00000231997	retained_intron		16	1	20228572	406
ENSMUSG00000084838	processed_pseudogene	Gm10241	ENSMUST00000117664	processed_pseudogene		16	-1	20177012	286
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000211100	processed_transcript		7	1	101871617	220
ENSMUSG00000021200	protein_coding	Asb2	ENSMUST00000021617	protein_coding	principal2	12	-1	103356001	2690
ENSMUSG00000097330	processed_transcript	Gm26672	ENSMUST00000192501	antisense		18	-1	37767541	756
ENSMUSG00000102525	processed_pseudogene	Gm37784	ENSMUST00000193233	processed_pseudogene		3	1	69963282	189
ENSMUSG00000097330	processed_transcript	Gm26672	ENSMUST00000180922	antisense		18	-1	37768242	2685
ENSMUSG00000073803	TEC	4930544L04Rik	ENSMUST00000211181	TEC		7	1	135396335	3204
ENSMUSG00000097330	processed_transcript	Gm26672	ENSMUST00000192805	retained_intron		18	-1	37756348	1531
ENSMUSG00000073803	TEC	4930544L04Rik	ENSMUST00000097982	TEC		7	1	135396342	3203
ENSMUSG00000038246	protein_coding	Fam50b	ENSMUST00000039605	protein_coding	principal1	13	1	34734850	1229
ENSMUSG00000021200	protein_coding	Asb2	ENSMUST00000127447	retained_intron		12	-1	103335584	2399
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000150169	retained_intron		8	-1	68062286	2733
ENSMUSG00000048347	protein_coding	Pcdhb18	ENSMUST00000055949	protein_coding	principal1	18	1	37489465	5041
ENSMUSG00000038246	protein_coding	Fam50b	ENSMUST00000221037	protein_coding	principal1	13	1	34739612	1345
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000130307	processed_transcript		8	-1	67906337	524
ENSMUSG00000021200	protein_coding	Asb2	ENSMUST00000149431	protein_coding	alternative2	12	-1	103338373	2283
ENSMUSG00000048377	protein_coding	Foxi2	ENSMUST00000060356	protein_coding	alternative2	7	1	135410308	2657
ENSMUSG00000117411	processed_pseudogene	Gm3744	ENSMUST00000234725	processed_pseudogene		18	-1	46942176	370
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000146480	processed_transcript		8	-1	67904120	429
ENSMUSG00000081248	processed_pseudogene	Gm13787	ENSMUST00000120422	processed_pseudogene		2	-1	91344189	168
ENSMUSG00000021200	protein_coding	Asb2	ENSMUST00000135694	processed_transcript		12	-1	103336734	383
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000145595	retained_intron		8	-1	67951879	1049
ENSMUSG00000067522	protein_coding	Olfr76	ENSMUST00000216205	processed_transcript		19	-1	12123196	3071
ENSMUSG00000067522	protein_coding	Olfr76	ENSMUST00000213471	protein_coding		19	-1	12123196	3109
ENSMUSG00000032913	protein_coding	Lrig2	ENSMUST00000046316	protein_coding	principal3	3	-1	104511840	7099
ENSMUSG00000090185	antisense	Gm15523	ENSMUST00000160463	antisense		12	1	103336906	439
ENSMUSG00000048377	protein_coding	Foxi2	ENSMUST00000238917	protein_coding	principal2	7	1	135410367	2591
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000185416	processed_transcript		8	-1	68121313	673
ENSMUSG00000103144	protein_coding	Pcdhga1	ENSMUST00000194888	protein_coding	alternative2	18	1	37661793	3247
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000212994	processed_transcript		8	-1	68212027	1471
ENSMUSG00000108899	TEC	Gm44811	ENSMUST00000209120	TEC		7	1	70531222	228
ENSMUSG00000067522	protein_coding	Olfr76	ENSMUST00000214676	protein_coding	principal1	19	-1	12123203	3175
ENSMUSG00000067522	protein_coding	Olfr76	ENSMUST00000087822	protein_coding	principal1	19	-1	12120700	1048
ENSMUSG00000032913	protein_coding	Lrig2	ENSMUST00000199070	protein_coding		3	-1	104511828	5991
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000098696	protein_coding	alternative2	8	-1	67974574	11316
ENSMUSG00000103144	protein_coding	Pcdhga1	ENSMUST00000194190	protein_coding	principal2	18	1	37661793	4692
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000038959	protein_coding	alternative2	8	-1	67974574	11319
ENSMUSG00000030465	protein_coding	Psd3	ENSMUST00000178529	protein_coding		8	-1	68121527	828
ENSMUSG00000087266	antisense	Gm15991	ENSMUST00000212123	antisense		8	1	67956769	3565
ENSMUSG00000087266	antisense	Gm15991	ENSMUST00000127631	antisense		8	1	67956770	942
ENSMUSG00000032913	protein_coding	Lrig2	ENSMUST00000200453	retained_intron		3	-1	104479873	3179
ENSMUSG00000020829	protein_coding	Slc46a1	ENSMUST00000001126	protein_coding	principal1	11	1	78465697	1978
ENSMUSG00000032913	protein_coding	Lrig2	ENSMUST00000198332	protein_coding	alternative2	3	-1	104511856	3946
ENSMUSG00000015944	protein_coding	Castor2	ENSMUST00000016088	protein_coding	principal1	5	1	134099711	7367
ENSMUSG00000027788	protein_coding	Otol1	ENSMUST00000053013	protein_coding	principal1	3	1	70007613	2161
ENSMUSG00000048312	protein_coding	Gm4884	ENSMUST00000164422	protein_coding	principal1	7	1	41032719	2852
ENSMUSG00000020829	protein_coding	Slc46a1	ENSMUST00000146431	nonsense_mediated_decay		11	1	78465750	749
ENSMUSG00000015944	protein_coding	Castor2	ENSMUST00000201013	processed_transcript		5	1	134100005	395
ENSMUSG00000109598	lincRNA	Gm36356	ENSMUST00000209224	lincRNA		7	1	135486029	2277
ENSMUSG00000118151	processed_pseudogene	Gm5690	ENSMUST00000238110	processed_pseudogene		18	1	74240890	635
ENSMUSG00000100732	processed_pseudogene	Topbp1-ps2	ENSMUST00000191289	processed_pseudogene		7	-1	41048847	189
ENSMUSG00000015944	protein_coding	Castor2	ENSMUST00000140240	retained_intron		5	1	134134958	838
ENSMUSG00000102006	processed_pseudogene	Gm28591	ENSMUST00000185259	processed_pseudogene		1	-1	121645849	183
ENSMUSG00000084200	processed_pseudogene	Gm11584	ENSMUST00000120636	processed_pseudogene		11	-1	102113573	325
ENSMUSG00000047021	protein_coding	Cfap65	ENSMUST00000094844	protein_coding	principal1	1	-1	74935599	5727
ENSMUSG00000102488	TEC	Gm37920	ENSMUST00000192952	TEC		1	1	121706515	749
ENSMUSG00000083390	processed_pseudogene	Gm13121	ENSMUST00000120637	processed_pseudogene		4	-1	144527042	632
ENSMUSG00000103020	processed_pseudogene	Gm37681	ENSMUST00000193880	processed_pseudogene		3	1	70059745	727
ENSMUSG00000020829	protein_coding	Slc46a1	ENSMUST00000180786	retained_intron		11	1	78470226	1834
ENSMUSG00000082045	processed_pseudogene	Gm11585	ENSMUST00000120901	processed_pseudogene		11	1	102124072	569
ENSMUSG00000083584	processed_pseudogene	Gm15394	ENSMUST00000119656	processed_pseudogene		1	-1	121970524	1308
ENSMUSG00000029686	protein_coding	Cul1	ENSMUST00000146828	protein_coding		6	1	47453398	723
ENSMUSG00000029686	protein_coding	Cul1	ENSMUST00000152547	protein_coding		6	1	47453492	501
ENSMUSG00000028593	protein_coding	Aadacl4fm1	ENSMUST00000030328	protein_coding	principal1	4	1	144519822	1406
ENSMUSG00000032913	protein_coding	Lrig2	ENSMUST00000196518	retained_intron		3	-1	104511918	5147
ENSMUSG00000047021	protein_coding	Cfap65	ENSMUST00000139950	retained_intron		1	-1	74935594	3947
ENSMUSG00000050866	protein_coding	Clrn3	ENSMUST00000053716	protein_coding	principal1	7	-1	135528654	3305
ENSMUSG00000032913	protein_coding	Lrig2	ENSMUST00000197018	retained_intron		3	-1	104462823	2647
ENSMUSG00000047021	protein_coding	Cfap65	ENSMUST00000130489	retained_intron		1	-1	74935592	3425
ENSMUSG00000032913	protein_coding	Lrig2	ENSMUST00000198089	retained_intron		3	-1	104511661	1719
ENSMUSG00000118479	unitary_pseudogene	Gm32514	ENSMUST00000238240	unitary_pseudogene		2	-1	90893198	533
ENSMUSG00000103113	processed_pseudogene	Gm37585	ENSMUST00000195440	processed_pseudogene		3	-1	70116532	280
ENSMUSG00000033628	protein_coding	Pik3c3	ENSMUST00000115812	protein_coding	principal1	18	1	30272747	3257
ENSMUSG00000032913	protein_coding	Lrig2	ENSMUST00000198452	retained_intron		3	-1	104491431	445
ENSMUSG00000049439	protein_coding	Cyp20a1	ENSMUST00000114202	retained_intron		1	1	60343323	976
ENSMUSG00000105659	sense_intronic	4930509H03Rik	ENSMUST00000196088	sense_intronic		3	-1	104511313	1215
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000124458	protein_coding		X	-1	41814246	3506
ENSMUSG00000100913	processed_pseudogene	Gm8392	ENSMUST00000185647	processed_pseudogene		1	1	122190221	835
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000210984	protein_coding		7	1	101871642	668
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000106978	protein_coding		7	1	101881325	841
ENSMUSG00000105304	sense_intronic	Gm43696	ENSMUST00000199385	sense_intronic		3	-1	104476730	6071
ENSMUSG00000085852	antisense	Gm13807	ENSMUST00000137073	antisense		2	1	93403547	1295
ENSMUSG00000033628	protein_coding	Pik3c3	ENSMUST00000115811	protein_coding		18	1	30272870	3084
ENSMUSG00000028085	protein_coding	Gatb	ENSMUST00000107672	protein_coding		3	1	85574119	1820
ENSMUSG00000099960	lincRNA	Gm28590	ENSMUST00000185679	lincRNA		1	1	122205145	1609
ENSMUSG00000104768	antisense	Gm38412	ENSMUST00000199205	antisense		3	1	104409161	3895
ENSMUSG00000103263	TEC	Gm36982	ENSMUST00000193796	TEC		1	1	122521749	1128
ENSMUSG00000033628	protein_coding	Pik3c3	ENSMUST00000091978	protein_coding		18	1	30272872	2998
ENSMUSG00000104973	sense_intronic	A530041M06Rik	ENSMUST00000199690	sense_intronic		3	-1	104501607	2288
ENSMUSG00000102663	processed_pseudogene	Gm6631	ENSMUST00000193699	processed_pseudogene		3	1	70413319	559
ENSMUSG00000103499	transcribed_unprocessed_pseudogene	Gm6558	ENSMUST00000191934	transcribed_unprocessed_pseudogene		3	-1	31687842	1973
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000131269	processed_transcript		7	1	101896030	385
ENSMUSG00000103499	transcribed_unprocessed_pseudogene	Gm6558	ENSMUST00000195395	processed_transcript		3	-1	31690585	612
ENSMUSG00000103499	transcribed_unprocessed_pseudogene	Gm6558	ENSMUST00000192046	processed_transcript		3	-1	31690585	180
ENSMUSG00000028085	protein_coding	Gatb	ENSMUST00000127348	protein_coding	principal1	3	1	85574119	3469
ENSMUSG00000082418	processed_pseudogene	Gm13126	ENSMUST00000117079	processed_pseudogene		4	-1	144548568	3063
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000035395	protein_coding		7	1	101896340	836
ENSMUSG00000025213	protein_coding	Kazald1	ENSMUST00000111948	protein_coding	principal1	19	1	45075241	1625
ENSMUSG00000033628	protein_coding	Pik3c3	ENSMUST00000131405	nonsense_mediated_decay		18	1	30272927	3144
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000146286	retained_intron		7	1	101896408	538
ENSMUSG00000028085	protein_coding	Gatb	ENSMUST00000107674	protein_coding		3	1	85574127	1980
ENSMUSG00000116537	lincRNA	Gm49698	ENSMUST00000232443	lincRNA		12	1	20451675	739
ENSMUSG00000025213	protein_coding	Kazald1	ENSMUST00000026234	protein_coding	principal1	19	1	45076139	1380
ENSMUSG00000113026	processed_pseudogene	Gm48669	ENSMUST00000221690	processed_pseudogene		12	-1	20512954	170
ENSMUSG00000028085	protein_coding	Gatb	ENSMUST00000134273	processed_transcript		3	1	85574132	366
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000106973	protein_coding	principal1	7	1	101896416	650
ENSMUSG00000104959	processed_pseudogene	Gm18131	ENSMUST00000199241	processed_pseudogene		13	1	19412800	449
ENSMUSG00000117848	lincRNA	Gm35867	ENSMUST00000236133	lincRNA		19	1	45058841	1126
ENSMUSG00000117848	lincRNA	Gm35867	ENSMUST00000236984	lincRNA		19	1	45087051	893
ENSMUSG00000034810	protein_coding	Scn7a	ENSMUST00000042792	protein_coding	principal1	2	-1	66784914	7338
ENSMUSG00000117848	lincRNA	Gm35867	ENSMUST00000237225	lincRNA		19	1	45087051	1050
ENSMUSG00000117848	lincRNA	Gm35867	ENSMUST00000237139	lincRNA		19	1	45103241	1135
ENSMUSG00000108661	TEC	Gm45172	ENSMUST00000206054	TEC		7	-1	41058602	1301
ENSMUSG00000109028	lincRNA	Gm35842	ENSMUST00000207859	lincRNA		7	1	70548869	4464
ENSMUSG00000102113	unprocessed_pseudogene	Gm28061	ENSMUST00000189085	unprocessed_pseudogene		7	1	41067564	807
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000144207	protein_coding		7	1	101896417	3103
ENSMUSG00000108619	lincRNA	Gm44839	ENSMUST00000206590	lincRNA		7	-1	41078025	241
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000032884	retained_intron		7	1	101896428	937
ENSMUSG00000108490	lincRNA	1700110I07Rik	ENSMUST00000205487	lincRNA		7	-1	41089843	726
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000150018	processed_transcript		7	1	101896863	425
ENSMUSG00000108490	lincRNA	1700110I07Rik	ENSMUST00000206814	lincRNA		7	-1	41089832	444
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000172670	retained_intron		7	-1	16275771	867
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000143835	protein_coding		7	1	101896961	818
ENSMUSG00000028085	protein_coding	Gatb	ENSMUST00000029726	processed_transcript		3	1	85574195	1856
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000137949	retained_intron		7	1	101897388	709
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000098237	protein_coding		7	1	101897732	1328
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000129641	processed_transcript		7	1	101898992	388
ENSMUSG00000049439	protein_coding	Cyp20a1	ENSMUST00000060608	protein_coding	principal1	1	1	60343323	2223
ENSMUSG00000030649	protein_coding	Anapc15	ENSMUST00000178851	protein_coding		7	1	101897795	2797
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000211850	processed_transcript		8	1	94974751	829
ENSMUSG00000049439	protein_coding	Cyp20a1	ENSMUST00000148443	nonsense_mediated_decay		1	1	60343323	2056
ENSMUSG00000014771	protein_coding	Pdcd2	ENSMUST00000154293	protein_coding		17	-1	15527281	1924
ENSMUSG00000103822	TEC	6030460B20Rik	ENSMUST00000191764	TEC		1	1	60353119	1058
ENSMUSG00000106910	processed_pseudogene	Gm16273	ENSMUST00000202238	processed_pseudogene		5	1	66356918	268
ENSMUSG00000106818	TEC	Gm43790	ENSMUST00000202694	TEC		5	-1	66323017	2013
ENSMUSG00000014771	protein_coding	Pdcd2	ENSMUST00000054450	protein_coding	principal1	17	-1	15527301	1120
ENSMUSG00000054434	protein_coding	Tmem120b	ENSMUST00000161660	processed_transcript		5	1	123068415	754
ENSMUSG00000107091	TEC	Gm43343	ENSMUST00000202454	TEC		5	-1	66526112	1926
ENSMUSG00000106772	TEC	Gm43794	ENSMUST00000200971	TEC		5	-1	66444423	692
ENSMUSG00000014771	protein_coding	Pdcd2	ENSMUST00000125709	retained_intron		17	-1	15522143	429
ENSMUSG00000028212	protein_coding	Ccne2	ENSMUST00000029866	protein_coding	alternative1	4	1	11191726	3006
ENSMUSG00000014771	protein_coding	Pdcd2	ENSMUST00000232149	processed_transcript		17	-1	15527113	508
ENSMUSG00000022876	protein_coding	Samsn1	ENSMUST00000114239	protein_coding	principal1	16	-1	75909310	1890
ENSMUSG00000103897	protein_coding	Pcdhga8	ENSMUST00000066149	protein_coding	principal1	18	1	37725706	4730
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000102995	protein_coding	alternative1	6	1	29768480	5155
ENSMUSG00000014771	protein_coding	Pdcd2	ENSMUST00000139610	retained_intron		17	-1	15527084	670
ENSMUSG00000014771	protein_coding	Pdcd2	ENSMUST00000137233	retained_intron		17	-1	15526986	579
ENSMUSG00000103985	antisense	Gm37446	ENSMUST00000193015	antisense		18	-1	37437547	4136
ENSMUSG00000024610	protein_coding	Cd74	ENSMUST00000097563	protein_coding	principal1	18	1	60803848	1410
ENSMUSG00000028212	protein_coding	Ccne2	ENSMUST00000108324	protein_coding	principal4	4	1	11191730	2908
ENSMUSG00000102713	antisense	Gm29994	ENSMUST00000195495	antisense		18	-1	37830200	1193
ENSMUSG00000028212	protein_coding	Ccne2	ENSMUST00000147725	processed_transcript		4	1	11191736	432
ENSMUSG00000028212	protein_coding	Ccne2	ENSMUST00000149075	processed_transcript		4	1	11192597	461
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000101581	protein_coding	alternative1	5	1	15934788	3879
ENSMUSG00000024610	protein_coding	Cd74	ENSMUST00000050487	protein_coding		18	1	60803848	1224
ENSMUSG00000028212	protein_coding	Ccne2	ENSMUST00000170901	protein_coding	principal4	4	1	11191354	3006
ENSMUSG00000020038	protein_coding	Cry1	ENSMUST00000020227	protein_coding	principal1	10	-1	85185064	3026
ENSMUSG00000047307	protein_coding	Pcdhb13	ENSMUST00000056915	protein_coding	principal1	18	1	37442500	3710
ENSMUSG00000022876	protein_coding	Samsn1	ENSMUST00000226794	processed_transcript		16	-1	75953332	2112
ENSMUSG00000020038	protein_coding	Cry1	ENSMUST00000214248	retained_intron		10	-1	85144441	406
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000162955	retained_intron		5	-1	66313728	4889
ENSMUSG00000024610	protein_coding	Cd74	ENSMUST00000238179	retained_intron		18	1	60803905	703
ENSMUSG00000020038	protein_coding	Cry1	ENSMUST00000214805	retained_intron		10	-1	85151356	506
ENSMUSG00000020038	protein_coding	Cry1	ENSMUST00000214675	protein_coding		10	-1	85151308	177
ENSMUSG00000022876	protein_coding	Samsn1	ENSMUST00000114240	processed_transcript		16	-1	76022270	2055
ENSMUSG00000024610	protein_coding	Cd74	ENSMUST00000167610	protein_coding	principal1	18	1	60803856	1345
ENSMUSG00000025014	protein_coding	Dntt	ENSMUST00000051806	protein_coding		19	1	41029275	2130
ENSMUSG00000114651	processed_pseudogene	Gm6200	ENSMUST00000224206	processed_pseudogene		13	-1	38674566	434
ENSMUSG00000070856	protein_coding	Olfr1115	ENSMUST00000214119	protein_coding	principal1	2	1	87248013	2455
ENSMUSG00000022876	protein_coding	Samsn1	ENSMUST00000139691	retained_intron		16	-1	75909310	1749
ENSMUSG00000070856	protein_coding	Olfr1115	ENSMUST00000217196	protein_coding	principal1	2	1	87248022	2109
ENSMUSG00000022876	protein_coding	Samsn1	ENSMUST00000150248	retained_intron		16	-1	75909279	710
ENSMUSG00000070856	protein_coding	Olfr1115	ENSMUST00000213513	protein_coding	principal1	2	1	87248038	3604
ENSMUSG00000114813	lincRNA	Gm47510	ENSMUST00000225499	lincRNA		13	1	38723642	734
ENSMUSG00000022876	protein_coding	Samsn1	ENSMUST00000227215	processed_transcript		16	-1	76022270	660
ENSMUSG00000114319	lincRNA	Gm47509	ENSMUST00000224004	lincRNA		13	-1	38793660	749
ENSMUSG00000114319	lincRNA	Gm47509	ENSMUST00000226011	lincRNA		13	-1	38825755	422
ENSMUSG00000114319	lincRNA	Gm47509	ENSMUST00000225304	lincRNA		13	-1	38825718	498
ENSMUSG00000022876	protein_coding	Samsn1	ENSMUST00000228147	processed_transcript		16	-1	76022281	222
ENSMUSG00000070856	protein_coding	Olfr1115	ENSMUST00000081986	protein_coding	principal1	2	1	87251840	1102
ENSMUSG00000114767	lincRNA	Gm46392	ENSMUST00000224240	lincRNA		13	1	38710054	439
ENSMUSG00000084043	processed_pseudogene	Gm13732	ENSMUST00000117753	processed_pseudogene		2	1	87264915	535
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000047037	protein_coding	principal1	X	-1	41911901	7622
ENSMUSG00000025014	protein_coding	Dntt	ENSMUST00000112200	protein_coding	principal1	19	1	41029382	1948
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000159197	protein_coding		17	1	15499888	685
ENSMUSG00000087214	antisense	Gm15555	ENSMUST00000128832	antisense		16	1	76000784	713
ENSMUSG00000099451	processed_pseudogene	Gm29192	ENSMUST00000190942	processed_pseudogene		1	1	122810306	377
ENSMUSG00000029686	protein_coding	Cul1	ENSMUST00000146200	protein_coding		6	1	47453904	2385
ENSMUSG00000104180	TEC	Gm37970	ENSMUST00000193865	TEC		1	1	122866042	1732
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000115242	protein_coding	principal3	6	1	29768492	5152
ENSMUSG00000114767	lincRNA	Gm46392	ENSMUST00000225020	lincRNA		13	1	38861730	4103
ENSMUSG00000025014	protein_coding	Dntt	ENSMUST00000237959	processed_transcript		19	1	41029385	1090
ENSMUSG00000114845	lincRNA	Gm47511	ENSMUST00000224482	lincRNA		13	1	38775824	344
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000201282	retained_intron		6	1	29768498	2146
ENSMUSG00000097940	processed_pseudogene	Gm21392	ENSMUST00000182950	processed_pseudogene		6	1	78482693	972
ENSMUSG00000113209	bidirectional_promoter_lncRNA	1700081N11Rik	ENSMUST00000221447	bidirectional_promoter_lncRNA		12	1	54862647	569
ENSMUSG00000085491	antisense	4930527E20Rik	ENSMUST00000135700	antisense		2	1	30803793	351
ENSMUSG00000113209	bidirectional_promoter_lncRNA	1700081N11Rik	ENSMUST00000220682	bidirectional_promoter_lncRNA		12	1	54862991	507
ENSMUSG00000108073	processed_pseudogene	Gm6072	ENSMUST00000203989	processed_pseudogene		6	-1	78497441	496
ENSMUSG00000101720	lincRNA	Gm29005	ENSMUST00000186773	lincRNA		6	-1	78912924	320
ENSMUSG00000048217	protein_coding	Nags	ENSMUST00000129799	processed_transcript		11	1	102145513	2714
ENSMUSG00000102828	processed_transcript	Gm38182	ENSMUST00000192984	processed_transcript		18	1	37823879	993
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000151430	nonsense_mediated_decay		X	-1	41814620	2213
ENSMUSG00000108072	lincRNA	Gm20362	ENSMUST00000204808	lincRNA		6	1	79032044	2072
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000220684	protein_coding		13	-1	63431724	2006
ENSMUSG00000102828	processed_transcript	Gm38182	ENSMUST00000192109	processed_transcript		18	1	37824148	351
ENSMUSG00000107772	processed_pseudogene	Gm5311	ENSMUST00000203518	processed_pseudogene		6	1	79048116	709
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000145586	protein_coding		X	-1	41806562	574
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000143557	protein_coding		X	-1	41807050	462
ENSMUSG00000062929	protein_coding	Cfl2	ENSMUST00000223450	nonsense_mediated_decay		12	-1	54862798	2726
ENSMUSG00000029686	protein_coding	Cul1	ENSMUST00000031697	protein_coding	principal1	6	1	47454320	3161
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000155369	protein_coding		X	-1	41806714	427
ENSMUSG00000102828	processed_transcript	Gm38182	ENSMUST00000192861	processed_transcript		18	1	37824359	931
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000150365	nonsense_mediated_decay		6	1	29768528	986
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000134084	processed_transcript		X	-1	41813715	908
ENSMUSG00000023963	protein_coding	Cyp39a1	ENSMUST00000170988	protein_coding	principal1	17	1	43667425	3053
ENSMUSG00000102828	processed_transcript	Gm38182	ENSMUST00000194068	processed_transcript		18	1	37824444	741
ENSMUSG00000029686	protein_coding	Cul1	ENSMUST00000143941	protein_coding		6	1	47454388	530
ENSMUSG00000050121	protein_coding	Opalin	ENSMUST00000236184	retained_intron		19	-1	41068123	2794
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000039370	protein_coding	alternative1	5	1	15934788	3933
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000130993	retained_intron		X	-1	41814322	675
ENSMUSG00000029686	protein_coding	Cul1	ENSMUST00000126877	processed_transcript		6	1	47514809	368
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000123512	processed_transcript		X	-1	41858954	936
ENSMUSG00000102828	processed_transcript	Gm38182	ENSMUST00000194980	processed_transcript		18	1	37824737	742
ENSMUSG00000102827	transcribed_processed_pseudogene	Gm8242	ENSMUST00000193056	transcribed_processed_pseudogene		18	-1	37652907	475
ENSMUSG00000023963	protein_coding	Cyp39a1	ENSMUST00000233627	protein_coding		17	1	43667510	2338
ENSMUSG00000023963	protein_coding	Cyp39a1	ENSMUST00000233437	protein_coding		17	1	43667525	2227
ENSMUSG00000029686	protein_coding	Cul1	ENSMUST00000151934	retained_intron		6	1	47516992	569
ENSMUSG00000102827	transcribed_processed_pseudogene	Gm8242	ENSMUST00000193029	processed_transcript		18	-1	37654172	1420
ENSMUSG00000103483	processed_pseudogene	Gm20162	ENSMUST00000193629	processed_pseudogene		18	1	37434243	871
ENSMUSG00000023963	protein_coding	Cyp39a1	ENSMUST00000233165	protein_coding		17	1	43731943	520
ENSMUSG00000062929	protein_coding	Cfl2	ENSMUST00000078124	protein_coding	principal1	12	-1	54862877	2940
ENSMUSG00000029686	protein_coding	Cul1	ENSMUST00000154201	retained_intron		6	1	47519696	381
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000143091	protein_coding		6	1	29799551	636
ENSMUSG00000029686	protein_coding	Cul1	ENSMUST00000149531	processed_transcript		6	1	47523564	581
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000125911	protein_coding		6	1	29801859	2039
ENSMUSG00000113484	lincRNA	Gm47157	ENSMUST00000221289	lincRNA		13	-1	34814544	376
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000064872	protein_coding	alternative1	6	1	29853760	2019
ENSMUSG00000117588	bidirectional_promoter_lncRNA	Gm49974	ENSMUST00000234013	bidirectional_promoter_lncRNA		18	-1	46958680	600
ENSMUSG00000062929	protein_coding	Cfl2	ENSMUST00000221374	processed_transcript		12	-1	54862798	1128
ENSMUSG00000103707	protein_coding	Pcdha6	ENSMUST00000193777	protein_coding	principal2	18	1	36967631	5367
ENSMUSG00000050121	protein_coding	Opalin	ENSMUST00000087176	protein_coding	principal1	19	-1	41077113	1839
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000199704	protein_coding	alternative1	5	1	15934788	3861
ENSMUSG00000103707	protein_coding	Pcdha6	ENSMUST00000193389	protein_coding	alternative2	18	1	36967648	4653
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000152581	protein_coding		6	1	29853767	339
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000150443	retained_intron		X	-1	41830930	2067
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000180204	protein_coding	alternative1	5	1	15934788	3882
ENSMUSG00000062929	protein_coding	Cfl2	ENSMUST00000223320	retained_intron		12	-1	54861738	1160
ENSMUSG00000107618	processed_pseudogene	Gm6261	ENSMUST00000204707	processed_pseudogene		6	1	79541208	760
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000176265	protein_coding		6	1	29853769	541
ENSMUSG00000062929	protein_coding	Cfl2	ENSMUST00000221088	processed_transcript		12	-1	54862454	474
ENSMUSG00000108027	lincRNA	Gm44271	ENSMUST00000204525	lincRNA		6	1	79688845	2600
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000151802	retained_intron		X	-1	41831072	1356
ENSMUSG00000103707	protein_coding	Pcdha6	ENSMUST00000194751	nonsense_mediated_decay		18	1	36967650	4319
ENSMUSG00000062929	protein_coding	Cfl2	ENSMUST00000223095	processed_transcript		12	-1	54862616	470
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000118976	protein_coding	alternative2	7	-1	16286790	2175
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000154079	protein_coding		6	1	29853774	722
ENSMUSG00000028937	protein_coding	Acot7	ENSMUST00000075363	protein_coding	alternative2	4	1	152178134	1457
ENSMUSG00000102222	protein_coding	Pcdhga10	ENSMUST00000193404	protein_coding	principal1	18	1	37746993	4732
ENSMUSG00000096887	protein_coding	Gm20594	ENSMUST00000179797	protein_coding	principal1	6	1	79817916	449
ENSMUSG00000114949	TEC	Gm47530	ENSMUST00000223588	TEC		13	-1	38919219	2067
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000135396	retained_intron		6	1	29853891	3615
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000041010	protein_coding	principal3	7	-1	16285059	2379
ENSMUSG00000028937	protein_coding	Acot7	ENSMUST00000124548	processed_transcript		4	1	152185765	311
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000078272	protein_coding	principal3	5	1	15934788	7311
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000127338	retained_intron		X	-1	41911901	2697
ENSMUSG00000028937	protein_coding	Acot7	ENSMUST00000030779	protein_coding	alternative2	4	1	152186206	1425
ENSMUSG00000048217	protein_coding	Nags	ENSMUST00000055409	protein_coding	principal1	11	1	102145549	2028
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000129915	nonsense_mediated_decay		X	-1	41911886	869
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000124084	retained_intron		7	-1	16280697	2773
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000196750	protein_coding		5	1	15934911	1272
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000115238	protein_coding	alternative1	6	1	29859379	5129
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000146085	protein_coding		7	-1	16278384	546
ENSMUSG00000028937	protein_coding	Acot7	ENSMUST00000105652	protein_coding	alternative2	4	1	152199810	1393
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000152921	protein_coding		X	-1	41920674	489
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000131259	nonsense_mediated_decay		X	-1	41897846	229
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000131963	retained_intron		7	-1	16276697	394
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000129447	retained_intron		7	-1	16281166	748
ENSMUSG00000107498	TEC	Gm44240	ENSMUST00000204015	TEC		6	1	80048676	2654
ENSMUSG00000028937	protein_coding	Acot7	ENSMUST00000144733	processed_transcript		4	1	152199868	481
ENSMUSG00000037475	protein_coding	Thoc2	ENSMUST00000151454	retained_intron		X	-1	41899301	1654
ENSMUSG00000048217	protein_coding	Nags	ENSMUST00000147252	processed_transcript		11	1	102146366	1709
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000128927	protein_coding		6	1	29859685	709
ENSMUSG00000081398	processed_pseudogene	Gm7657	ENSMUST00000118851	processed_pseudogene		X	1	41916416	666
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000137993	processed_transcript		7	-1	16281806	324
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000200270	retained_intron		5	1	16025714	1866
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000134438	protein_coding		6	1	29859710	728
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000073029	protein_coding	principal3	13	-1	63431745	3165
ENSMUSG00000028937	protein_coding	Acot7	ENSMUST00000167926	protein_coding	principal4	4	1	152186134	1505
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000138205	processed_transcript		6	1	29865387	248
ENSMUSG00000085724	sense_intronic	Gm13096	ENSMUST00000127752	sense_intronic		4	1	152203926	251
ENSMUSG00000087339	antisense	Gm11586	ENSMUST00000123060	antisense		11	-1	102146246	566
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000161977	protein_coding	principal3	13	-1	63431724	3111
ENSMUSG00000100762	processed_pseudogene	Gm8403	ENSMUST00000189712	processed_pseudogene		1	-1	123149217	1298
ENSMUSG00000049897	protein_coding	Stkld1	ENSMUST00000153771	protein_coding		2	1	26934047	400
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000160166	processed_transcript		13	-1	63317395	308
ENSMUSG00000104023	unprocessed_pseudogene	Gm37213	ENSMUST00000193077	unprocessed_pseudogene		3	-1	70567296	586
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000148741	nonsense_mediated_decay		7	-1	16286780	479
ENSMUSG00000036098	protein_coding	Myrf	ENSMUST00000088013	protein_coding	alternative2	19	-1	10240748	5674
ENSMUSG00000100405	processed_pseudogene	Gm28911	ENSMUST00000188837	processed_pseudogene		1	1	123205149	117
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000163091	protein_coding	alternative2	13	-1	63431725	2995
ENSMUSG00000102666	processed_pseudogene	Gm8599	ENSMUST00000193033	processed_pseudogene		3	-1	71401547	457
ENSMUSG00000100525	processed_pseudogene	Gm20058	ENSMUST00000186939	processed_pseudogene		1	1	123274139	284
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000174270	protein_coding		7	-1	16285536	630
ENSMUSG00000101495	processed_pseudogene	Gm28912	ENSMUST00000189001	processed_pseudogene		1	1	123287574	234
ENSMUSG00000103396	processed_pseudogene	Gm38305	ENSMUST00000194825	processed_pseudogene		3	-1	71465669	223
ENSMUSG00000052581	protein_coding	Lrrtm4	ENSMUST00000147663	protein_coding	principal2	6	1	80018877	3033
ENSMUSG00000027108	protein_coding	Ola1	ENSMUST00000028517	protein_coding	principal1	2	-1	73214447	2175
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000200158	retained_intron		5	1	16325985	2310
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000200294	retained_intron		5	1	16326151	720
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000099444	protein_coding		13	-1	63431694	2288
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000199236	retained_intron		5	1	16361395	543
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000212581	protein_coding		8	1	94976993	384
ENSMUSG00000052581	protein_coding	Lrrtm4	ENSMUST00000128718	protein_coding		6	1	80018888	506
ENSMUSG00000036098	protein_coding	Myrf	ENSMUST00000190922	retained_intron		19	-1	10240748	4813
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000160336	processed_transcript		13	-1	63325018	881
ENSMUSG00000027108	protein_coding	Ola1	ENSMUST00000100015	protein_coding		2	-1	73214333	905
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000150528	protein_coding		7	-1	16286774	354
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000144186	retained_intron		7	-1	16286773	391
ENSMUSG00000027108	protein_coding	Ola1	ENSMUST00000136684	processed_transcript		2	-1	73214412	1300
ENSMUSG00000027108	protein_coding	Ola1	ENSMUST00000152608	processed_transcript		2	-1	73214426	1654
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000149816	retained_intron		6	1	29870289	4903
ENSMUSG00000027108	protein_coding	Ola1	ENSMUST00000112055	protein_coding		2	-1	73212960	1251
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000202115	retained_intron		6	1	29876679	2390
ENSMUSG00000036098	protein_coding	Myrf	ENSMUST00000186056	protein_coding	alternative2	19	-1	10240745	3636
ENSMUSG00000037307	protein_coding	Banf2	ENSMUST00000037722	protein_coding	principal1	2	1	144033059	571
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000115281	protein_coding	alternative1	5	1	15934829	3412
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000146609	protein_coding		7	-1	16286795	387
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000201020	retained_intron		6	1	29893752	2406
ENSMUSG00000041375	protein_coding	Ccdc9	ENSMUST00000145519	protein_coding		7	-1	16286025	283
ENSMUSG00000036098	protein_coding	Myrf	ENSMUST00000186854	protein_coding		19	-1	10217528	1517
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000141304	retained_intron		6	1	29896329	576
ENSMUSG00000027108	protein_coding	Ola1	ENSMUST00000133228	processed_transcript		2	-1	73218924	547
ENSMUSG00000083976	processed_pseudogene	Gm13664	ENSMUST00000117304	processed_pseudogene		2	1	73176611	345
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000176693	processed_transcript		6	1	29903034	562
ENSMUSG00000083569	processed_pseudogene	Gm13666	ENSMUST00000120032	processed_pseudogene		2	1	73131745	799
ENSMUSG00000103108	lincRNA	Rncr4	ENSMUST00000194541	lincRNA		6	1	30172893	2234
ENSMUSG00000037307	protein_coding	Banf2	ENSMUST00000110032	protein_coding	principal1	2	1	144033102	409
ENSMUSG00000029772	protein_coding	Ahcyl2	ENSMUST00000128837	processed_transcript		6	1	29903506	504
ENSMUSG00000052581	protein_coding	Lrrtm4	ENSMUST00000126005	protein_coding		6	1	80018918	3733
ENSMUSG00000107012	TEC	4930528J11Rik	ENSMUST00000201689	TEC		6	-1	29915633	3611
ENSMUSG00000007440	protein_coding	Pcdha11	ENSMUST00000115658	protein_coding	principal1	18	1	37005203	5359
ENSMUSG00000036098	protein_coding	Myrf	ENSMUST00000189897	protein_coding	principal2	19	-1	10240604	3339
ENSMUSG00000052581	protein_coding	Lrrtm4	ENSMUST00000133918	protein_coding	alternative1	6	1	80018918	2255
ENSMUSG00000109106	lincRNA	4933430H16Rik	ENSMUST00000209078	lincRNA		7	-1	82940688	1319
ENSMUSG00000086384	antisense	Banf2os	ENSMUST00000124061	antisense		2	-1	144068806	771
ENSMUSG00000109541	processed_pseudogene	Gm6112	ENSMUST00000208037	processed_pseudogene		7	-1	82967217	629
ENSMUSG00000052581	protein_coding	Lrrtm4	ENSMUST00000126399	protein_coding	alternative1	6	1	80019011	3050
ENSMUSG00000036098	protein_coding	Myrf	ENSMUST00000189439	retained_intron		19	-1	10240748	3177
ENSMUSG00000103037	protein_coding	Pcdhgb1	ENSMUST00000192931	protein_coding	principal1	18	1	37680233	4723
ENSMUSG00000086384	antisense	Banf2os	ENSMUST00000145504	antisense		2	-1	144068783	386
ENSMUSG00000103037	protein_coding	Pcdhgb1	ENSMUST00000195624	processed_transcript		18	1	37680257	3636
ENSMUSG00000052581	protein_coding	Lrrtm4	ENSMUST00000136421	protein_coding		6	1	80019048	4435
ENSMUSG00000052581	protein_coding	Lrrtm4	ENSMUST00000145407	protein_coding		6	1	80019342	675
ENSMUSG00000049897	protein_coding	Stkld1	ENSMUST00000055406	protein_coding	principal1	2	1	26934069	2169
ENSMUSG00000052581	protein_coding	Lrrtm4	ENSMUST00000074662	protein_coding		6	1	80019643	3383
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000117648	protein_coding	principal1	16	1	94370618	7415
ENSMUSG00000036109	protein_coding	Mbnl3	ENSMUST00000114875	protein_coding		X	-1	51205832	4649
ENSMUSG00000111122	processed_pseudogene	Gm5949	ENSMUST00000213468	processed_pseudogene		10	1	44153470	1421
ENSMUSG00000103332	protein_coding	Pcdhga2	ENSMUST00000193869	protein_coding	principal1	18	1	37668953	4689
ENSMUSG00000027255	protein_coding	Arfgap2	ENSMUST00000080008	protein_coding	principal3	2	1	91264974	3068
ENSMUSG00000107996	TEC	Gm44228	ENSMUST00000204888	TEC		6	1	80217451	2026
ENSMUSG00000040118	protein_coding	Cacna2d1	ENSMUST00000167946	protein_coding	alternative1	5	1	15934691	7436
ENSMUSG00000091358	transcribed_processed_pseudogene	Speer5-ps1	ENSMUST00000217649	processed_transcript		10	1	44169911	7431
ENSMUSG00000108173	TEC	Gm44231	ENSMUST00000204106	TEC		6	1	80655029	4075
ENSMUSG00000104886	antisense	Gm43000	ENSMUST00000198482	antisense		5	-1	15997839	3343
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000066717	protein_coding		18	1	69344146	4250
ENSMUSG00000106177	processed_pseudogene	Gm43491	ENSMUST00000197133	processed_pseudogene		5	-1	16344181	784
ENSMUSG00000051469	protein_coding	Zfp24	ENSMUST00000066497	protein_coding	principal1	18	-1	24020810	5732
ENSMUSG00000107905	TEC	Gm44230	ENSMUST00000203032	TEC		6	1	80268496	3550
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000147352	protein_coding		16	1	94370739	3540
ENSMUSG00000108088	TEC	Gm44229	ENSMUST00000203211	TEC		6	1	80445350	2487
ENSMUSG00000028086	protein_coding	Fbxw7	ENSMUST00000107679	protein_coding		3	1	84815268	4473
ENSMUSG00000101566	lincRNA	Gm28276	ENSMUST00000188508	lincRNA		Y	-1	53968902	2166
ENSMUSG00000108264	TEC	Gm20371	ENSMUST00000203354	TEC		6	1	80302613	1756
ENSMUSG00000051469	protein_coding	Zfp24	ENSMUST00000153337	protein_coding	principal1	18	-1	24020320	1513
ENSMUSG00000107840	TEC	Gm44241	ENSMUST00000203230	TEC		6	1	80319192	1662
ENSMUSG00000027255	protein_coding	Arfgap2	ENSMUST00000028691	protein_coding	alternative1	2	1	91265293	2791
ENSMUSG00000091358	transcribed_processed_pseudogene	Speer5-ps1	ENSMUST00000169525	transcribed_processed_pseudogene		10	1	44170447	1430
ENSMUSG00000025758	protein_coding	Plk4	ENSMUST00000026858	protein_coding	principal3	3	1	40800019	3479
ENSMUSG00000036109	protein_coding	Mbnl3	ENSMUST00000041495	protein_coding		X	-1	51146415	1803
ENSMUSG00000029462	protein_coding	Vps29	ENSMUST00000155671	protein_coding	principal3	5	1	122354369	2716
ENSMUSG00000091358	transcribed_processed_pseudogene	Speer5-ps1	ENSMUST00000215938	processed_transcript		10	1	44217029	965
ENSMUSG00000051469	protein_coding	Zfp24	ENSMUST00000148525	protein_coding		18	-1	24020370	737
ENSMUSG00000101190	lincRNA	Gm28274	ENSMUST00000187775	lincRNA		Y	1	54001257	1157
ENSMUSG00000111224	processed_pseudogene	Gm18669	ENSMUST00000216049	processed_pseudogene		10	-1	44170354	778
ENSMUSG00000117500	processed_pseudogene	Gm18085	ENSMUST00000234749	processed_pseudogene		18	-1	24081924	835
ENSMUSG00000086739	antisense	Gm4409	ENSMUST00000130734	antisense		6	-1	80023156	1919
ENSMUSG00000027255	protein_coding	Arfgap2	ENSMUST00000150701	retained_intron		2	1	91265324	520
ENSMUSG00000024786	protein_coding	Majin	ENSMUST00000025699	protein_coding		19	1	6184388	1239
ENSMUSG00000028086	protein_coding	Fbxw7	ENSMUST00000151410	retained_intron		3	1	84815478	4348
ENSMUSG00000107826	TEC	Gm44242	ENSMUST00000204212	TEC		6	1	80514594	2721
ENSMUSG00000028086	protein_coding	Fbxw7	ENSMUST00000212597	processed_transcript		3	1	84815766	56
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000149753	retained_intron		16	1	94370743	613
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000114985	protein_coding	principal3	18	1	69344489	8577
ENSMUSG00000101190	lincRNA	Gm28274	ENSMUST00000187320	lincRNA		Y	1	54001366	437
ENSMUSG00000101190	lincRNA	Gm28274	ENSMUST00000190189	lincRNA		Y	1	54001366	621
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000160333	retained_intron		13	-1	63431722	2240
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000159056	processed_transcript		13	-1	63331864	824
ENSMUSG00000099942	unprocessed_pseudogene	Gm28275	ENSMUST00000189795	unprocessed_pseudogene		Y	-1	54112369	695
ENSMUSG00000028086	protein_coding	Fbxw7	ENSMUST00000107678	protein_coding		3	1	84864145	4073
ENSMUSG00000027255	protein_coding	Arfgap2	ENSMUST00000150753	retained_intron		2	1	91265334	859
ENSMUSG00000029462	protein_coding	Vps29	ENSMUST00000118830	protein_coding	alternative1	5	1	122354385	1014
ENSMUSG00000100864	unprocessed_pseudogene	Gm21302	ENSMUST00000188765	unprocessed_pseudogene		Y	-1	54186670	696
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000161656	processed_transcript		13	-1	63352172	545
ENSMUSG00000027255	protein_coding	Arfgap2	ENSMUST00000128296	processed_transcript		2	1	91265702	373
ENSMUSG00000029462	protein_coding	Vps29	ENSMUST00000117868	protein_coding		5	1	122354406	720
ENSMUSG00000025758	protein_coding	Plk4	ENSMUST00000204594	retained_intron		3	1	40800028	3403
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000160151	retained_intron		13	-1	63431745	2529
ENSMUSG00000025758	protein_coding	Plk4	ENSMUST00000204289	retained_intron		3	1	40800042	1582
ENSMUSG00000020287	protein_coding	Mpg	ENSMUST00000142964	nonsense_mediated_decay		11	1	32226505	1404
ENSMUSG00000027255	protein_coding	Arfgap2	ENSMUST00000146228	retained_intron		2	1	91269342	499
ENSMUSG00000029462	protein_coding	Vps29	ENSMUST00000132785	processed_transcript		5	1	122354409	529
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000160735	protein_coding		13	-1	63398167	350
ENSMUSG00000028086	protein_coding	Fbxw7	ENSMUST00000107675	protein_coding	alternative1	3	1	84925480	3599
ENSMUSG00000054434	protein_coding	Tmem120b	ENSMUST00000067505	protein_coding	principal1	5	1	123076275	2164
ENSMUSG00000027255	protein_coding	Arfgap2	ENSMUST00000127895	retained_intron		2	1	91270092	700
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000128706	protein_coding		18	1	69344492	2066
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201781	protein_coding		18	1	69344492	2779
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000162971	protein_coding		13	-1	63431255	890
ENSMUSG00000063694	protein_coding	Cycs	ENSMUST00000161401	protein_coding	principal1	6	-1	50566538	3123
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000162375	protein_coding		13	-1	63406297	869
ENSMUSG00000025758	protein_coding	Plk4	ENSMUST00000203895	nonsense_mediated_decay		3	1	40800042	3320
ENSMUSG00000028086	protein_coding	Fbxw7	ENSMUST00000029727	protein_coding	principal2	3	1	84952146	2221
ENSMUSG00000036109	protein_coding	Mbnl3	ENSMUST00000114876	protein_coding	principal1	X	-1	51205990	2243
ENSMUSG00000029462	protein_coding	Vps29	ENSMUST00000111729	nonsense_mediated_decay		5	1	122354422	874
ENSMUSG00000063694	protein_coding	Cycs	ENSMUST00000077766	retained_intron		6	-1	50565949	607
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000161507	retained_intron		13	-1	63398294	494
ENSMUSG00000029462	protein_coding	Vps29	ENSMUST00000118765	protein_coding		5	1	122354422	713
ENSMUSG00000054434	protein_coding	Tmem120b	ENSMUST00000161059	nonsense_mediated_decay		5	1	123076325	823
ENSMUSG00000025758	protein_coding	Plk4	ENSMUST00000203320	retained_intron		3	1	40800050	1599
ENSMUSG00000029462	protein_coding	Vps29	ENSMUST00000145821	protein_coding		5	1	122354440	407
ENSMUSG00000025758	protein_coding	Plk4	ENSMUST00000203295	protein_coding	alternative2	3	1	40800054	3363
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000159024	protein_coding		13	-1	63497278	807
ENSMUSG00000054434	protein_coding	Tmem120b	ENSMUST00000111619	protein_coding		5	1	123076326	1256
ENSMUSG00000036109	protein_coding	Mbnl3	ENSMUST00000150014	retained_intron		X	-1	51127370	4121
ENSMUSG00000024786	protein_coding	Majin	ENSMUST00000113528	protein_coding	principal1	19	1	6184467	1562
ENSMUSG00000054434	protein_coding	Tmem120b	ENSMUST00000160344	protein_coding		5	1	123076341	448
ENSMUSG00000029462	protein_coding	Vps29	ENSMUST00000154686	nonsense_mediated_decay		5	1	122354460	488
ENSMUSG00000025758	protein_coding	Plk4	ENSMUST00000167556	protein_coding	alternative2	3	1	40800254	2769
ENSMUSG00000106422	lincRNA	Gm42812	ENSMUST00000199844	lincRNA		3	-1	85553389	337
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000221054	processed_transcript		13	-1	63431662	363
ENSMUSG00000036109	protein_coding	Mbnl3	ENSMUST00000136404	protein_coding		X	-1	51164674	1632
ENSMUSG00000054434	protein_coding	Tmem120b	ENSMUST00000160489	retained_intron		5	1	123076351	703
ENSMUSG00000025758	protein_coding	Plk4	ENSMUST00000204473	protein_coding		3	1	40800781	404
ENSMUSG00000036109	protein_coding	Mbnl3	ENSMUST00000148116	processed_transcript		X	-1	51139366	1082
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000160931	protein_coding		13	-1	63431683	417
ENSMUSG00000113820	unprocessed_pseudogene	Gm4012	ENSMUST00000221504	unprocessed_pseudogene		12	1	20545201	600
ENSMUSG00000054434	protein_coding	Tmem120b	ENSMUST00000162104	retained_intron		5	1	123076370	777
ENSMUSG00000081437	processed_pseudogene	Gm12402	ENSMUST00000120536	processed_pseudogene		4	-1	41132844	334
ENSMUSG00000113293	processed_pseudogene	Gm48688	ENSMUST00000220809	processed_pseudogene		12	1	20606446	148
ENSMUSG00000025758	protein_coding	Plk4	ENSMUST00000205046	retained_intron		3	1	40801463	505
ENSMUSG00000036109	protein_coding	Mbnl3	ENSMUST00000156028	processed_transcript		X	-1	51206532	356
ENSMUSG00000021461	protein_coding	Fancc	ENSMUST00000160617	protein_coding		13	-1	63409768	375
ENSMUSG00000020287	protein_coding	Mpg	ENSMUST00000020528	protein_coding	principal1	11	1	32226511	1737
ENSMUSG00000029462	protein_coding	Vps29	ENSMUST00000199086	retained_intron		5	1	122357627	3364
ENSMUSG00000054434	protein_coding	Tmem120b	ENSMUST00000161049	retained_intron		5	1	123099901	679
ENSMUSG00000085776	antisense	5430402O13Rik	ENSMUST00000147260	antisense		6	1	50566643	940
ENSMUSG00000037451	protein_coding	Slc22a20	ENSMUST00000041827	protein_coding	principal1	19	-1	5986143	1897
ENSMUSG00000104951	TEC	Gm43413	ENSMUST00000200411	TEC		5	1	123110696	1566
ENSMUSG00000090232	sense_intronic	Gm16132	ENSMUST00000159296	sense_intronic		13	-1	63381045	598
ENSMUSG00000025758	protein_coding	Plk4	ENSMUST00000204032	protein_coding		3	1	40812738	593
ENSMUSG00000089868	processed_pseudogene	Gm16134	ENSMUST00000161714	processed_pseudogene		13	-1	63447265	336
ENSMUSG00000085776	antisense	5430402O13Rik	ENSMUST00000126537	antisense		6	1	50566738	869
ENSMUSG00000083811	processed_pseudogene	Gm13071	ENSMUST00000122237	processed_pseudogene		4	1	149500633	376
ENSMUSG00000020287	protein_coding	Mpg	ENSMUST00000144903	retained_intron		11	1	32226530	834
ENSMUSG00000113203	sense_intronic	Gm47587	ENSMUST00000222801	sense_intronic		13	1	63142494	738
ENSMUSG00000020287	protein_coding	Mpg	ENSMUST00000138050	nonsense_mediated_decay		11	1	32226539	2143
ENSMUSG00000114104	TEC	Gm47585	ENSMUST00000220661	TEC		13	1	63273600	2312
ENSMUSG00000079006	protein_coding	Gm14151	ENSMUST00000109890	protein_coding	principal1	2	-1	151092350	2672
ENSMUSG00000114189	lincRNA	9330199G10Rik	ENSMUST00000221607	lincRNA		13	-1	19504367	1728
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000111828	protein_coding	alternative2	14	-1	45658142	9802
ENSMUSG00000113257	sense_intronic	Gm30409	ENSMUST00000223302	sense_intronic		13	1	63134051	229
ENSMUSG00000037451	protein_coding	Slc22a20	ENSMUST00000237046	processed_transcript		19	-1	5986143	877
ENSMUSG00000114189	lincRNA	9330199G10Rik	ENSMUST00000221601	lincRNA		13	-1	19504345	2072
ENSMUSG00000079006	protein_coding	Gm14151	ENSMUST00000139910	processed_transcript		2	-1	151088432	451
ENSMUSG00000116635	transcribed_unprocessed_pseudogene	Gm49699	ENSMUST00000231814	transcribed_unprocessed_pseudogene		12	1	20664517	573
ENSMUSG00000116635	transcribed_unprocessed_pseudogene	Gm49699	ENSMUST00000232444	processed_transcript		12	1	20666341	404
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000014911	protein_coding	principal1	17	1	15499888	1891
ENSMUSG00000116883	lincRNA	Gm49700	ENSMUST00000222348	lincRNA		12	1	20615343	1546
ENSMUSG00000114129	processed_pseudogene	Gm16476	ENSMUST00000221544	processed_pseudogene		12	1	20615302	139
ENSMUSG00000113157	processed_transcript	Gm48693	ENSMUST00000223281	processed_transcript		12	1	20615014	725
ENSMUSG00000113251	processed_pseudogene	Gm18363	ENSMUST00000221671	processed_pseudogene		13	1	19525987	730
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000162505	protein_coding	principal1	17	1	15499888	12794
ENSMUSG00000004951	protein_coding	Hspb1	ENSMUST00000005077	protein_coding	principal1	5	1	135887919	903
ENSMUSG00000025158	protein_coding	Rfng	ENSMUST00000123273	processed_transcript		11	-1	120784185	2467
ENSMUSG00000103255	protein_coding	Pcdhac1	ENSMUST00000007584	protein_coding	principal1	18	1	37090013	5419
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000087320	protein_coding	alternative2	14	-1	45658061	9820
ENSMUSG00000111356	processed_pseudogene	Rpl32l	ENSMUST00000216127	processed_pseudogene		10	1	20208490	399
ENSMUSG00000004951	protein_coding	Hspb1	ENSMUST00000111155	protein_coding		5	1	135888018	930
ENSMUSG00000105047	processed_pseudogene	Gm42533	ENSMUST00000196247	processed_pseudogene		5	-1	135896486	157
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111696	protein_coding		2	-1	84650745	6281
ENSMUSG00000103749	protein_coding	Pcdhgb5	ENSMUST00000192535	protein_coding	principal1	18	1	37731009	4670
ENSMUSG00000103749	protein_coding	Pcdhgb5	ENSMUST00000193006	retained_intron		18	1	37731054	4569
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000147081	protein_coding		17	1	15499901	820
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000118001	protein_coding		17	1	15499910	1652
ENSMUSG00000086949	antisense	Gm13066	ENSMUST00000145263	antisense		4	-1	149567790	884
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000143924	protein_coding		17	1	15499912	763
ENSMUSG00000045062	protein_coding	Pcdhb7	ENSMUST00000053037	protein_coding	principal1	18	1	37341702	3501
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000119879	protein_coding		17	1	15499922	967
ENSMUSG00000029449	protein_coding	Rhof	ENSMUST00000160479	nonsense_mediated_decay		5	-1	123132461	4306
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000051310	protein_coding	principal3	14	-1	45658143	5012
ENSMUSG00000029449	protein_coding	Rhof	ENSMUST00000162208	processed_transcript		5	-1	123132429	348
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000155051	protein_coding		17	1	15499928	639
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000117593	protein_coding	principal1	17	1	15499960	2067
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000232661	retained_intron		17	1	15502989	691
ENSMUSG00000044043	protein_coding	Pcdhb14	ENSMUST00000052387	protein_coding	principal1	18	1	37447656	8695
ENSMUSG00000029449	protein_coding	Rhof	ENSMUST00000031401	protein_coding	principal1	5	-1	123132692	2208
ENSMUSG00000074513	protein_coding	Arfip1	ENSMUST00000098990	protein_coding	alternative1	3	-1	84582534	2799
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000153480	processed_transcript		17	1	15504583	712
ENSMUSG00000036241	protein_coding	Ube2r2	ENSMUST00000040008	protein_coding	principal1	4	1	41135743	3600
ENSMUSG00000029828	protein_coding	4921507P07Rik	ENSMUST00000031852	protein_coding	principal1	6	-1	50596632	2378
ENSMUSG00000103386	antisense	Gm37751	ENSMUST00000192440	antisense		18	-1	36935149	1198
ENSMUSG00000029449	protein_coding	Rhof	ENSMUST00000186469	protein_coding	principal1	5	-1	123132396	4241
ENSMUSG00000014767	protein_coding	Tbp	ENSMUST00000149518	retained_intron		17	1	15515483	460
ENSMUSG00000102634	antisense	Gm38225	ENSMUST00000194001	antisense		18	-1	36953043	393
ENSMUSG00000074513	protein_coding	Arfip1	ENSMUST00000107687	protein_coding		3	-1	84582485	1714
ENSMUSG00000036241	protein_coding	Ube2r2	ENSMUST00000129874	retained_intron		4	1	41182920	777
ENSMUSG00000036241	protein_coding	Ube2r2	ENSMUST00000123642	retained_intron		4	1	41188888	831
ENSMUSG00000082186	processed_pseudogene	Gm12403	ENSMUST00000121384	processed_pseudogene		4	1	41168646	959
ENSMUSG00000026887	protein_coding	Mrrf	ENSMUST00000028250	protein_coding	principal1	2	1	36136389	2623
ENSMUSG00000046387	protein_coding	Pcdhb17	ENSMUST00000053856	protein_coding	principal1	18	1	37484795	4660
ENSMUSG00000074513	protein_coding	Arfip1	ENSMUST00000143514	protein_coding	principal3	3	-1	84582625	1343
ENSMUSG00000026887	protein_coding	Mrrf	ENSMUST00000200701	retained_intron		2	1	36136398	2420
ENSMUSG00000026887	protein_coding	Mrrf	ENSMUST00000132042	nonsense_mediated_decay		2	1	36136634	392
ENSMUSG00000038510	protein_coding	Rpf2	ENSMUST00000045114	protein_coding		10	-1	40247002	1853
ENSMUSG00000102703	TEC	Gm38313	ENSMUST00000191953	TEC		3	-1	85196447	1266
ENSMUSG00000110038	sense_intronic	Gm45570	ENSMUST00000211137	sense_intronic		8	-1	25595106	495
ENSMUSG00000026887	protein_coding	Mrrf	ENSMUST00000162490	processed_transcript		2	1	36147103	475
ENSMUSG00000085414	antisense	Sspnos	ENSMUST00000139089	antisense		6	-1	145957534	826
ENSMUSG00000028988	protein_coding	Ctnnbip1	ENSMUST00000030839	protein_coding	principal1	4	1	149518236	2674
ENSMUSG00000102748	protein_coding	Pcdhgb2	ENSMUST00000195112	protein_coding	principal1	18	1	37689828	4661
ENSMUSG00000059908	protein_coding	Mug1	ENSMUST00000032228	protein_coding	principal1	6	1	121838541	4657
ENSMUSG00000043794	antisense	D830025C05Rik	ENSMUST00000210582	antisense		8	1	25597012	2196
ENSMUSG00000102748	protein_coding	Pcdhgb2	ENSMUST00000193631	retained_intron		18	1	37689835	2756
ENSMUSG00000118501	unprocessed_pseudogene	AC020971.1	ENSMUST00000239033	unprocessed_pseudogene		18	1	37703539	1516
ENSMUSG00000043794	antisense	D830025C05Rik	ENSMUST00000059474	pseudogene		8	1	25597012	976
ENSMUSG00000025158	protein_coding	Rfng	ENSMUST00000026156	protein_coding	principal1	11	-1	120784207	2118
ENSMUSG00000012705	protein_coding	Retn	ENSMUST00000012849	protein_coding	principal1	8	1	3655770	874
ENSMUSG00000028988	protein_coding	Ctnnbip1	ENSMUST00000105692	protein_coding	principal1	4	1	149545117	634
ENSMUSG00000031286	protein_coding	Glt28d2	ENSMUST00000033643	protein_coding	principal1	3	-1	85887516	2732
ENSMUSG00000106565	processed_pseudogene	Gm43582	ENSMUST00000196149	processed_pseudogene		3	-1	104634657	343
ENSMUSG00000012705	protein_coding	Retn	ENSMUST00000169234	protein_coding	principal1	8	1	3655770	1139
ENSMUSG00000029464	protein_coding	Gpn3	ENSMUST00000127608	nonsense_mediated_decay		5	1	122371876	2198
ENSMUSG00000085625	processed_pseudogene	Gm8813	ENSMUST00000155930	processed_pseudogene		3	-1	84553452	595
ENSMUSG00000051486	protein_coding	Pcdhb11	ENSMUST00000053073	protein_coding	principal1	18	1	37421418	4419
ENSMUSG00000079005	protein_coding	Gm14147	ENSMUST00000109888	protein_coding	principal1	2	1	151098245	2681
ENSMUSG00000079005	protein_coding	Gm14147	ENSMUST00000178211	protein_coding	principal1	2	1	151100608	1923
ENSMUSG00000104121	TEC	Gm37485	ENSMUST00000192326	TEC		1	1	86801075	2953
ENSMUSG00000102293	TEC	Gm37541	ENSMUST00000192464	TEC		1	1	86874350	2315
ENSMUSG00000103984	TEC	Gm37447	ENSMUST00000195625	TEC		1	1	87036723	2928
ENSMUSG00000100768	sense_intronic	Gm29055	ENSMUST00000186337	sense_intronic		1	1	86774819	1710
ENSMUSG00000099401	antisense	Gm28375	ENSMUST00000185304	antisense		1	-1	87057596	430
ENSMUSG00000102571	TEC	Gm37967	ENSMUST00000195634	TEC		1	1	86917992	2665
ENSMUSG00000059908	protein_coding	Mug1	ENSMUST00000148563	retained_intron		6	1	121838578	3848
ENSMUSG00000056498	protein_coding	Tmem154	ENSMUST00000107682	protein_coding	principal1	3	1	84666192	3342
ENSMUSG00000038510	protein_coding	Rpf2	ENSMUST00000183309	protein_coding	principal1	10	-1	40247036	1296
ENSMUSG00000059908	protein_coding	Mug1	ENSMUST00000204485	retained_intron		6	1	121840180	647
ENSMUSG00000059908	protein_coding	Mug1	ENSMUST00000204943	retained_intron		6	1	121841104	404
ENSMUSG00000102649	TEC	Gm38021	ENSMUST00000195687	TEC		1	1	86893573	1560
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000107654	protein_coding	principal3	7	-1	46795999	4422
ENSMUSG00000038510	protein_coding	Rpf2	ENSMUST00000182287	processed_transcript		10	-1	40227798	523
ENSMUSG00000030255	protein_coding	Sspn	ENSMUST00000111702	protein_coding		6	1	145931641	4415
ENSMUSG00000102956	TEC	Gm37017	ENSMUST00000195266	TEC		1	1	86988270	747
ENSMUSG00000059908	protein_coding	Mug1	ENSMUST00000204210	retained_intron		6	1	121885577	531
ENSMUSG00000104400	TEC	Gm38010	ENSMUST00000192592	TEC		1	1	86834995	2784
ENSMUSG00000038510	protein_coding	Rpf2	ENSMUST00000181995	protein_coding		10	-1	40247003	799
ENSMUSG00000056498	protein_coding	Tmem154	ENSMUST00000134890	retained_intron		3	1	84666210	1575
ENSMUSG00000038510	protein_coding	Rpf2	ENSMUST00000183052	protein_coding		10	-1	40247027	667
ENSMUSG00000056498	protein_coding	Tmem154	ENSMUST00000129417	processed_transcript		3	1	84666370	400
ENSMUSG00000038510	protein_coding	Rpf2	ENSMUST00000183114	protein_coding		10	-1	40246993	479
ENSMUSG00000056498	protein_coding	Tmem154	ENSMUST00000128344	retained_intron		3	1	84690223	457
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000014562	protein_coding	principal3	7	-1	46796027	4953
ENSMUSG00000102632	TEC	Gm37786	ENSMUST00000191714	TEC		10	-1	40222807	3225
ENSMUSG00000108767	processed_pseudogene	Gm29763	ENSMUST00000205306	processed_pseudogene		7	-1	25792843	616
ENSMUSG00000053333	protein_coding	Dis3l2	ENSMUST00000188121	processed_transcript		1	1	86703808	1173
ENSMUSG00000108889	protein_coding	Olfr1555-ps1	ENSMUST00000219261	protein_coding	principal1	19	-1	12170112	2918
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000041826	protein_coding	principal1	3	1	57736062	2678
ENSMUSG00000108889	protein_coding	Olfr1555-ps1	ENSMUST00000207679	protein_coding	principal1	19	-1	12170074	2791
ENSMUSG00000114127	processed_pseudogene	Gm8231	ENSMUST00000221617	processed_pseudogene		13	-1	34866577	783
ENSMUSG00000085527	sense_intronic	Gm15535	ENSMUST00000148478	sense_intronic		3	-1	85573945	1519
ENSMUSG00000030255	protein_coding	Sspn	ENSMUST00000032383	protein_coding	principal1	6	1	145934122	4431
ENSMUSG00000085527	sense_intronic	Gm15535	ENSMUST00000128872	sense_intronic		3	-1	85573854	375
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000198510	protein_coding		3	1	57736063	347
ENSMUSG00000040591	protein_coding	1110051M20Rik	ENSMUST00000064652	protein_coding	alternative1	2	-1	91444622	2896
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000211347	nonsense_mediated_decay		7	-1	46795808	4726
ENSMUSG00000030255	protein_coding	Sspn	ENSMUST00000111701	protein_coding		6	1	145953429	4512
ENSMUSG00000108200	TEC	Gm43931	ENSMUST00000204817	TEC		6	1	145947076	2870
ENSMUSG00000032902	protein_coding	Slc16a1	ENSMUST00000046212	protein_coding	principal1	3	1	104638668	4426
ENSMUSG00000051000	protein_coding	Fam160a1	ENSMUST00000126445	retained_intron		3	-1	85673988	3242
ENSMUSG00000029076	protein_coding	Sdf4	ENSMUST00000105579	protein_coding	principal1	4	1	155992872	1670
ENSMUSG00000105199	sense_intronic	Gm43581	ENSMUST00000196766	sense_intronic		3	1	104642994	2864
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000198996	processed_transcript		3	1	57736075	2848
ENSMUSG00000106287	sense_intronic	Gm43585	ENSMUST00000199375	sense_intronic		3	1	104646241	1403
ENSMUSG00000109712	processed_pseudogene	Gm8667	ENSMUST00000211112	processed_pseudogene		7	-1	104222781	449
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000197920	processed_transcript		3	1	57736082	435
ENSMUSG00000029464	protein_coding	Gpn3	ENSMUST00000031420	protein_coding	principal1	5	1	122372451	1592
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000200497	protein_coding		3	1	57736082	2573
ENSMUSG00000040591	protein_coding	1110051M20Rik	ENSMUST00000102594	protein_coding	principal3	2	-1	91444642	1977
ENSMUSG00000026889	protein_coding	Rbm18	ENSMUST00000028251	protein_coding	principal1	2	-1	36136773	2617
ENSMUSG00000072244	protein_coding	Trim6	ENSMUST00000144538	retained_intron		7	1	104218793	1490
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000198214	protein_coding		3	1	57736085	2027
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000124640	nonsense_mediated_decay		11	-1	32267689	2696
ENSMUSG00000029076	protein_coding	Sdf4	ENSMUST00000050078	protein_coding	principal1	4	1	155992911	5177
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000107653	protein_coding	alternative2	7	-1	46795881	4702
ENSMUSG00000029464	protein_coding	Gpn3	ENSMUST00000156978	retained_intron		5	1	122372527	500
ENSMUSG00000040591	protein_coding	1110051M20Rik	ENSMUST00000094835	protein_coding		2	-1	91444680	1498
ENSMUSG00000025377	protein_coding	Tepsin	ENSMUST00000093901	protein_coding	principal2	11	-1	120098731	2770
ENSMUSG00000029076	protein_coding	Sdf4	ENSMUST00000097734	protein_coding		4	1	155993170	973
ENSMUSG00000040591	protein_coding	1110051M20Rik	ENSMUST00000132092	processed_transcript		2	-1	91283141	791
ENSMUSG00000026889	protein_coding	Rbm18	ENSMUST00000200733	nonsense_mediated_decay		2	-1	36136576	1000
ENSMUSG00000029464	protein_coding	Gpn3	ENSMUST00000123537	nonsense_mediated_decay		5	1	122373985	781
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000197205	nonsense_mediated_decay		3	1	57736113	3244
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000145776	retained_intron		7	-1	46795678	4918
ENSMUSG00000029464	protein_coding	Gpn3	ENSMUST00000146698	nonsense_mediated_decay		5	1	122381268	809
ENSMUSG00000025377	protein_coding	Tepsin	ENSMUST00000026442	protein_coding	alternative2	11	-1	120098731	2752
ENSMUSG00000029076	protein_coding	Sdf4	ENSMUST00000105578	protein_coding	principal1	4	1	155993377	1654
ENSMUSG00000029464	protein_coding	Gpn3	ENSMUST00000151173	protein_coding		5	1	122381293	595
ENSMUSG00000025377	protein_coding	Tepsin	ENSMUST00000106225	protein_coding	alternative2	11	-1	120098731	2566
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000079160	protein_coding	principal1	8	-1	25597513	2126
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000138480	nonsense_mediated_decay		7	-1	46769020	839
ENSMUSG00000104916	TEC	Gm42830	ENSMUST00000196642	TEC		5	1	122377408	313
ENSMUSG00000026889	protein_coding	Rbm18	ENSMUST00000122456	protein_coding		2	-1	36136611	781
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000211571	protein_coding		7	-1	46769092	660
ENSMUSG00000029076	protein_coding	Sdf4	ENSMUST00000124872	retained_intron		4	1	155999448	403
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000200600	protein_coding		3	1	57736120	352
ENSMUSG00000029076	protein_coding	Sdf4	ENSMUST00000149971	retained_intron		4	1	156008510	696
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202674	protein_coding		18	1	69344529	2615
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000198249	protein_coding		3	1	57736120	486
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000211133	retained_intron		8	-1	25582129	747
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000153789	protein_coding	alternative2	7	-1	46774916	1602
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000109390	processed_transcript		11	-1	32256413	3531
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000130365	protein_coding	alternative2	7	-1	46771987	760
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000141859	nonsense_mediated_decay		11	-1	32267689	3417
ENSMUSG00000025377	protein_coding	Tepsin	ENSMUST00000150094	processed_transcript		11	-1	120097385	976
ENSMUSG00000103815	processed_pseudogene	Gm19194	ENSMUST00000192015	processed_pseudogene		3	1	71672518	3774
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000199041	protein_coding		3	1	57736120	1062
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000034041	protein_coding	principal1	8	1	46739732	2497
ENSMUSG00000025377	protein_coding	Tepsin	ENSMUST00000152152	processed_transcript		11	-1	120097260	641
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000143627	retained_intron		7	-1	46768463	657
ENSMUSG00000036503	protein_coding	Rnf13	ENSMUST00000197783	retained_intron		3	1	57800805	3873
ENSMUSG00000106421	processed_pseudogene	Gm9645	ENSMUST00000197131	processed_pseudogene		3	-1	57766655	792
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000157026	retained_intron		7	-1	46778422	674
ENSMUSG00000026889	protein_coding	Rbm18	ENSMUST00000134668	nonsense_mediated_decay		2	-1	36136615	714
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202116	protein_coding	alternative1	18	1	69345719	2986
ENSMUSG00000106006	processed_pseudogene	Gm17951	ENSMUST00000198536	processed_pseudogene		3	-1	57810257	496
ENSMUSG00000024908	protein_coding	Ppp6r3	ENSMUST00000025846	protein_coding	principal3	19	-1	3575720	4841
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000208507	protein_coding		8	1	46739761	383
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000152759	protein_coding		7	-1	46796064	813
ENSMUSG00000025377	protein_coding	Tepsin	ENSMUST00000131569	processed_transcript		11	-1	120098700	758
ENSMUSG00000040591	protein_coding	1110051M20Rik	ENSMUST00000145573	processed_transcript		2	-1	91444643	732
ENSMUSG00000026889	protein_coding	Rbm18	ENSMUST00000142809	retained_intron		2	-1	36136611	3509
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000211471	protein_coding	alternative2	7	-1	46791016	357
ENSMUSG00000081496	processed_pseudogene	Gm13428	ENSMUST00000117540	processed_pseudogene		2	-1	36137703	365
ENSMUSG00000117028	antisense	Gm49874	ENSMUST00000232711	antisense		17	-1	28224167	1064
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000210284	nonsense_mediated_decay		8	1	46739761	2338
ENSMUSG00000014418	protein_coding	Hps5	ENSMUST00000123725	protein_coding		7	-1	46795703	658
ENSMUSG00000040591	protein_coding	1110051M20Rik	ENSMUST00000139807	processed_transcript		2	-1	91444669	418
ENSMUSG00000082480	processed_pseudogene	Gm11687	ENSMUST00000118911	processed_pseudogene		2	-1	144143373	886
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000207105	protein_coding		8	1	46739784	720
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000211068	lincRNA		2	-1	144191051	1122
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000210482	lincRNA		2	-1	144191242	1403
ENSMUSG00000110087	sense_intronic	Gm45309	ENSMUST00000211528	sense_intronic		7	-1	46785546	695
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000210200	lincRNA		2	-1	144174364	1182
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000114982	protein_coding	alternative1	18	1	69345721	3694
ENSMUSG00000107475	processed_pseudogene	Gm19177	ENSMUST00000204520	processed_pseudogene		6	1	107881073	613
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000210067	lincRNA		2	-1	144191047	679
ENSMUSG00000040591	protein_coding	1110051M20Rik	ENSMUST00000139490	processed_transcript		2	-1	91444637	307
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000208433	protein_coding		8	1	46740028	566
ENSMUSG00000108009	processed_pseudogene	Gm44279	ENSMUST00000205154	processed_pseudogene		6	1	107888681	472
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000099292	lincRNA		2	-1	144189290	1743
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202772	protein_coding		18	1	69345761	2125
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000211025	lincRNA		2	-1	144191246	1262
ENSMUSG00000040591	protein_coding	1110051M20Rik	ENSMUST00000141262	processed_transcript		2	-1	91444704	463
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000210577	lincRNA		2	-1	144207990	991
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000207571	protein_coding		8	1	46740266	352
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201288	protein_coding		18	1	69345763	836
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000209431	lincRNA		2	-1	144207872	332
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000209284	lincRNA		2	-1	144207872	78
ENSMUSG00000118416	unitary_pseudogene	Gm50453	ENSMUST00000238366	unitary_pseudogene		4	-1	140446164	319
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000209482	lincRNA		2	-1	144207872	46
ENSMUSG00000074758	lincRNA	Gm5535	ENSMUST00000166982	lincRNA		2	-1	144179086	366
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000210218	protein_coding		8	1	46793499	535
ENSMUSG00000085047	lincRNA	Gm13026	ENSMUST00000140113	lincRNA		4	1	140437963	608
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000210095	retained_intron		8	1	46806324	324
ENSMUSG00000085127	antisense	4930444E06Rik	ENSMUST00000146746	antisense		2	1	144243241	1240
ENSMUSG00000024908	protein_coding	Ppp6r3	ENSMUST00000172362	protein_coding	alternative2	19	-1	3575716	4633
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000208976	retained_intron		8	1	46806470	944
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000210321	retained_intron		8	-1	25597513	1617
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000152110	retained_intron		14	-1	45621275	4040
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000155695	processed_transcript		18	1	69345773	794
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000211001	retained_intron		8	-1	25597576	2895
ENSMUSG00000051000	protein_coding	Fam160a1	ENSMUST00000118408	protein_coding	principal1	3	-1	85746266	4445
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000209539	processed_transcript		8	-1	25589528	462
ENSMUSG00000024908	protein_coding	Ppp6r3	ENSMUST00000225475	protein_coding		19	-1	3471005	1025
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000210334	retained_intron		8	1	46807230	397
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202354	protein_coding		18	1	69345851	2120
ENSMUSG00000031627	protein_coding	Irf2	ENSMUST00000209820	retained_intron		8	1	46815005	3965
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000210221	processed_transcript		8	-1	25589459	461
ENSMUSG00000072244	protein_coding	Trim6	ENSMUST00000098180	protein_coding	principal1	7	1	104218795	3827
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201235	protein_coding		18	1	69346173	746
ENSMUSG00000030093	protein_coding	Wnt7a	ENSMUST00000032180	protein_coding	principal1	6	-1	91411363	3172
ENSMUSG00000024908	protein_coding	Ppp6r3	ENSMUST00000225624	protein_coding		19	-1	3484852	684
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000114980	protein_coding	principal3	18	1	69346360	2192
ENSMUSG00000109751	antisense	Gm45479	ENSMUST00000211613	antisense		8	-1	46764973	802
ENSMUSG00000110414	TEC	Gm45481	ENSMUST00000209717	TEC		8	-1	46833912	877
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202610	protein_coding		18	1	69347299	1959
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000210810	protein_coding		8	-1	25597496	1538
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202058	processed_transcript		18	1	69347345	353
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000184850	retained_intron		17	-1	36081987	1072
ENSMUSG00000051000	protein_coding	Fam160a1	ENSMUST00000119077	nonsense_mediated_decay		3	-1	85817291	3735
ENSMUSG00000072244	protein_coding	Trim6	ENSMUST00000144455	protein_coding		7	1	104218837	520
ENSMUSG00000030093	protein_coding	Wnt7a	ENSMUST00000133092	processed_transcript		6	-1	91365097	293
ENSMUSG00000110374	antisense	Gm31172	ENSMUST00000210068	antisense		8	-1	46770985	321
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201299	protein_coding		18	1	69348256	576
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000209982	retained_intron		8	-1	25592768	472
ENSMUSG00000034390	protein_coding	Cmip	ENSMUST00000166750	protein_coding	principal1	8	1	117257064	2408
ENSMUSG00000072244	protein_coding	Trim6	ENSMUST00000128493	protein_coding		7	1	104219429	536
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000211422	protein_coding		8	-1	25597582	738
ENSMUSG00000030093	protein_coding	Wnt7a	ENSMUST00000132936	processed_transcript		6	-1	91365071	297
ENSMUSG00000072244	protein_coding	Trim6	ENSMUST00000153324	protein_coding		7	1	104221172	622
ENSMUSG00000051000	protein_coding	Fam160a1	ENSMUST00000094148	protein_coding	principal1	3	-1	85741389	4280
ENSMUSG00000086944	antisense	Gm15859	ENSMUST00000132069	antisense		16	1	4729869	710
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000210616	protein_coding		8	-1	25597496	2974
ENSMUSG00000072244	protein_coding	Trim6	ENSMUST00000214578	protein_coding		7	1	104225507	1506
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000210234	protein_coding		8	-1	25597564	837
ENSMUSG00000004070	protein_coding	Hmox2	ENSMUST00000154117	protein_coding		16	1	4726361	354
ENSMUSG00000047819	protein_coding	Tigd4	ENSMUST00000062623	protein_coding	principal1	3	1	84593574	3459
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000129599	retained_intron		14	-1	45623190	2802
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000210914	processed_transcript		8	-1	25597019	384
ENSMUSG00000029463	protein_coding	Fam216a	ENSMUST00000031419	protein_coding	principal1	5	-1	122372364	1388
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201631	protein_coding		18	1	69348267	2660
ENSMUSG00000037363	protein_coding	Letm2	ENSMUST00000209734	retained_intron		8	-1	25597488	1063
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202074	protein_coding		18	1	69348269	567
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000149286	nonsense_mediated_decay		14	-1	45658098	3573
ENSMUSG00000034390	protein_coding	Cmip	ENSMUST00000211913	retained_intron		8	1	117257117	2246
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202435	protein_coding		18	1	69348523	2427
ENSMUSG00000093930	protein_coding	Hmgcs1	ENSMUST00000225543	protein_coding		13	1	119690379	356
ENSMUSG00000024777	protein_coding	Ppp2r5b	ENSMUST00000025695	protein_coding	principal1	19	-1	6235872	2742
ENSMUSG00000099995	antisense	1700036G14Rik	ENSMUST00000189046	antisense		3	1	85317519	542
ENSMUSG00000109482	protein_coding	Gm4756	ENSMUST00000222413	protein_coding		12	-1	72628837	873
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000156758	nonsense_mediated_decay		14	-1	45602727	796
ENSMUSG00000034390	protein_coding	Cmip	ENSMUST00000095172	protein_coding		8	1	117349170	2276
ENSMUSG00000024777	protein_coding	Ppp2r5b	ENSMUST00000236699	retained_intron		19	-1	6229416	740
ENSMUSG00000109482	protein_coding	Gm4756	ENSMUST00000208039	protein_coding	principal1	12	-1	72628880	2344
ENSMUSG00000024777	protein_coding	Ppp2r5b	ENSMUST00000153155	retained_intron		19	-1	6230479	389
ENSMUSG00000109482	protein_coding	Gm4756	ENSMUST00000209162	retained_intron		12	-1	72609092	1308
ENSMUSG00000109482	protein_coding	Gm4756	ENSMUST00000207585	protein_coding		12	-1	72628885	1716
ENSMUSG00000105012	lincRNA	Gm42813	ENSMUST00000200057	lincRNA		3	-1	85428128	615
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000141487	nonsense_mediated_decay		14	-1	45620786	1729
ENSMUSG00000071064	protein_coding	Zfp827	ENSMUST00000087927	protein_coding		8	1	79028437	2801
ENSMUSG00000102919	TEC	Gm37726	ENSMUST00000193246	TEC		3	1	84873891	3886
ENSMUSG00000011463	protein_coding	Cpb1	ENSMUST00000011607	protein_coding	principal1	3	-1	20275733	2718
ENSMUSG00000109482	protein_coding	Gm4756	ENSMUST00000208307	protein_coding		12	-1	72649661	798
ENSMUSG00000109482	protein_coding	Gm4756	ENSMUST00000209038	protein_coding		12	-1	72628901	990
ENSMUSG00000034707	protein_coding	Gns	ENSMUST00000040344	protein_coding	principal1	10	1	121365090	3855
ENSMUSG00000109482	protein_coding	Gm4756	ENSMUST00000209092	nonsense_mediated_decay		12	-1	72628934	1076
ENSMUSG00000024777	protein_coding	Ppp2r5b	ENSMUST00000148693	processed_transcript		19	-1	6235843	467
ENSMUSG00000034707	protein_coding	Gns	ENSMUST00000219847	retained_intron		10	1	121365108	1358
ENSMUSG00000034390	protein_coding	Cmip	ENSMUST00000212884	retained_intron		8	1	117423416	4693
ENSMUSG00000011463	protein_coding	Cpb1	ENSMUST00000125945	retained_intron		3	-1	20252322	581
ENSMUSG00000034707	protein_coding	Gns	ENSMUST00000219249	nonsense_mediated_decay		10	1	121365109	651
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000020173	protein_coding	alternative2	10	1	20148471	4252
ENSMUSG00000011463	protein_coding	Cpb1	ENSMUST00000137855	processed_transcript		3	-1	20266443	507
ENSMUSG00000024908	protein_coding	Ppp6r3	ENSMUST00000223919	retained_intron		19	-1	3575737	2237
ENSMUSG00000024908	protein_coding	Ppp6r3	ENSMUST00000225705	retained_intron		19	-1	3496530	1882
ENSMUSG00000034707	protein_coding	Gns	ENSMUST00000219851	nonsense_mediated_decay		10	1	121365176	1056
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000126428	retained_intron		14	-1	45609342	604
ENSMUSG00000024908	protein_coding	Ppp6r3	ENSMUST00000225446	retained_intron		19	-1	3575696	5112
ENSMUSG00000038160	protein_coding	Atg5	ENSMUST00000039286	protein_coding	principal1	10	1	44268358	2352
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000226301	protein_coding		14	-1	45657360	681
ENSMUSG00000034707	protein_coding	Gns	ENSMUST00000219505	nonsense_mediated_decay		10	1	121374343	802
ENSMUSG00000024908	protein_coding	Ppp6r3	ENSMUST00000225339	retained_intron		19	-1	3521747	765
ENSMUSG00000102805	protein_coding	Gm37240	ENSMUST00000154148	protein_coding	principal1	3	-1	85887516	2913
ENSMUSG00000098040	lincRNA	Gm20757	ENSMUST00000182870	lincRNA		10	-1	92375373	1604
ENSMUSG00000111776	processed_pseudogene	Gm47124	ENSMUST00000215960	processed_pseudogene		10	1	92258590	691
ENSMUSG00000111104	processed_pseudogene	Gm8512	ENSMUST00000215367	processed_pseudogene		10	-1	92223474	471
ENSMUSG00000034707	protein_coding	Gns	ENSMUST00000220350	processed_transcript		10	1	121377074	373
ENSMUSG00000102805	protein_coding	Gm37240	ENSMUST00000125216	processed_transcript		3	-1	85887518	2302
ENSMUSG00000024908	protein_coding	Ppp6r3	ENSMUST00000226109	protein_coding		19	-1	3575722	509
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000147551	processed_transcript		14	-1	45657401	638
ENSMUSG00000038160	protein_coding	Atg5	ENSMUST00000217412	processed_transcript		10	1	44268415	415
ENSMUSG00000102805	protein_coding	Gm37240	ENSMUST00000146862	retained_intron		3	-1	85887368	411
ENSMUSG00000034707	protein_coding	Gns	ENSMUST00000219531	retained_intron		10	1	121377638	3501
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000116259	protein_coding	principal2	10	1	20148984	3831
ENSMUSG00000024908	protein_coding	Ppp6r3	ENSMUST00000113997	protein_coding	alternative2	19	-1	3575749	4952
ENSMUSG00000111078	lincRNA	Gm35028	ENSMUST00000215400	lincRNA		10	-1	44424324	2587
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000153547	retained_intron		14	-1	45657722	1143
ENSMUSG00000104290	processed_pseudogene	Gm38041	ENSMUST00000194445	processed_pseudogene		3	-1	85152696	661
ENSMUSG00000103741	processed_pseudogene	Gm38241	ENSMUST00000192641	processed_pseudogene		3	-1	84557787	898
ENSMUSG00000037697	protein_coding	Ddhd1	ENSMUST00000226559	retained_intron		14	-1	45632363	2671
ENSMUSG00000034707	protein_coding	Gns	ENSMUST00000219580	retained_intron		10	1	121379687	698
ENSMUSG00000114315	antisense	Gm48696	ENSMUST00000224419	antisense		19	1	3486090	531
ENSMUSG00000023036	protein_coding	Pcdhgc4	ENSMUST00000066140	protein_coding	principal1	18	1	37815079	5024
ENSMUSG00000020838	protein_coding	Slc6a4	ENSMUST00000108402	protein_coding	principal1	11	1	76998603	2796
ENSMUSG00000115553	lincRNA	Gm49124	ENSMUST00000228948	lincRNA		14	1	45565531	440
ENSMUSG00000034501	protein_coding	Pcnx4	ENSMUST00000044352	protein_coding	principal1	12	1	72536383	4300
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000214231	protein_coding		10	1	20148995	675
ENSMUSG00000034707	protein_coding	Gns	ENSMUST00000217712	retained_intron		10	1	121380133	672
ENSMUSG00000115148	TEC	Gm49125	ENSMUST00000227258	TEC		14	-1	45614066	1295
ENSMUSG00000113143	processed_pseudogene	Ly6e-ps1	ENSMUST00000222501	processed_pseudogene		12	1	72620775	367
ENSMUSG00000023036	protein_coding	Pcdhgc4	ENSMUST00000195239	protein_coding		18	1	37815401	2272
ENSMUSG00000034707	protein_coding	Gns	ENSMUST00000219216	retained_intron		10	1	121383115	3013
ENSMUSG00000023036	protein_coding	Pcdhgc4	ENSMUST00000193222	retained_intron		18	1	37815456	3100
ENSMUSG00000058542	processed_pseudogene	Gm15590	ENSMUST00000078419	processed_pseudogene		17	-1	6132405	552
ENSMUSG00000111741	unprocessed_pseudogene	Gm18903	ENSMUST00000215343	unprocessed_pseudogene		10	1	29425706	480
ENSMUSG00000024784	protein_coding	Gpha2	ENSMUST00000025698	protein_coding	principal1	19	1	6226380	609
ENSMUSG00000114570	lincRNA	Gm48058	ENSMUST00000225976	lincRNA		14	-1	29733395	286
ENSMUSG00000114815	lincRNA	Gm41118	ENSMUST00000224310	lincRNA		14	1	29735344	2293
ENSMUSG00000114815	lincRNA	Gm41118	ENSMUST00000225158	lincRNA		14	1	29737928	1331
ENSMUSG00000024784	protein_coding	Gpha2	ENSMUST00000113526	protein_coding	principal1	19	1	6226388	762
ENSMUSG00000108859	processed_pseudogene	Gm44776	ENSMUST00000207212	processed_pseudogene		8	-1	3660979	381
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000150346	protein_coding		16	1	94370743	2180
ENSMUSG00000036620	protein_coding	Mgat4b	ENSMUST00000147468	protein_coding		11	1	50210890	466
ENSMUSG00000079051	protein_coding	Vinac1	ENSMUST00000145798	protein_coding	principal1	2	-1	129048172	4242
ENSMUSG00000020838	protein_coding	Slc6a4	ENSMUST00000021195	protein_coding	principal1	11	1	76998616	2725
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000214823	retained_intron		10	1	20148998	1008
ENSMUSG00000038780	protein_coding	Smurf1	ENSMUST00000126822	retained_intron		5	-1	144886476	4710
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000216909	retained_intron		10	1	20170780	1900
ENSMUSG00000038165	transcribed_processed_pseudogene	1700022A21Rik	ENSMUST00000182910	processed_transcript		5	1	24645453	1448
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000149838	processed_transcript		17	1	6106437	2245
ENSMUSG00000038165	transcribed_processed_pseudogene	1700022A21Rik	ENSMUST00000182745	transcribed_processed_pseudogene		5	1	24647684	1051
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000217251	retained_intron		10	1	20170988	556
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000215924	protein_coding		10	1	20171022	610
ENSMUSG00000020838	protein_coding	Slc6a4	ENSMUST00000129572	protein_coding		11	1	77009274	643
ENSMUSG00000101813	transcribed_processed_pseudogene	Gm28503	ENSMUST00000185966	transcribed_processed_pseudogene		12	-1	20804708	147
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000216065	processed_transcript		10	1	20171706	333
ENSMUSG00000020838	protein_coding	Slc6a4	ENSMUST00000137819	retained_intron		11	1	77018177	2149
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000155692	protein_coding		16	1	94370746	3771
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000213386	processed_transcript		10	1	20172007	709
ENSMUSG00000071019	protein_coding	Sdr16c6	ENSMUST00000108383	protein_coding	principal1	4	-1	4077522	1923
ENSMUSG00000099759	processed_transcript	1700030C10Rik	ENSMUST00000189625	processed_transcript		12	-1	20815779	1735
ENSMUSG00000087398	antisense	Gm12343	ENSMUST00000138817	antisense		11	-1	77009873	414
ENSMUSG00000022687	protein_coding	Boc	ENSMUST00000114634	protein_coding	principal1	16	-1	44558897	4451
ENSMUSG00000091071	transcribed_unprocessed_pseudogene	1700030C10Rik	ENSMUST00000110971	processed_transcript		12	-1	20815727	1471
ENSMUSG00000116777	processed_pseudogene	Zfp520-ps	ENSMUST00000232392	processed_pseudogene		16	-1	17816321	1294
ENSMUSG00000091071	transcribed_unprocessed_pseudogene	1700030C10Rik	ENSMUST00000186243	transcribed_unprocessed_pseudogene		12	-1	20815471	126
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000213312	protein_coding		10	1	20229795	795
ENSMUSG00000071019	protein_coding	Sdr16c6	ENSMUST00000095151	protein_coding	principal1	4	-1	4076931	1834
ENSMUSG00000117345	processed_pseudogene	Gm7926	ENSMUST00000234753	processed_pseudogene		18	-1	30420060	375
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000215812	retained_intron		10	1	20261765	628
ENSMUSG00000040738	protein_coding	Ints8	ENSMUST00000044616	protein_coding	principal1	4	-1	11254258	3433
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000216474	retained_intron		10	1	20266627	788
ENSMUSG00000108861	lincRNA	5930435M05Rik	ENSMUST00000207936	lincRNA		7	-1	83200324	414
ENSMUSG00000108861	lincRNA	5930435M05Rik	ENSMUST00000207572	lincRNA		7	-1	83201586	3712
ENSMUSG00000019996	protein_coding	Map7	ENSMUST00000216308	retained_intron		10	1	20269501	776
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000020530	protein_coding	principal1	11	-1	32267707	2865
ENSMUSG00000110754	antisense	4930405J17Rik	ENSMUST00000214323	antisense		10	-1	20201838	620
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000238701	protein_coding	alternative2	8	1	84338639	8370
ENSMUSG00000045573	protein_coding	Penk	ENSMUST00000070375	protein_coding	principal1	4	-1	4138477	1449
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000179619	protein_coding	principal1	8	1	94977107	3616
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000136903	nonsense_mediated_decay		11	-1	32267658	2945
ENSMUSG00000045573	protein_coding	Penk	ENSMUST00000133567	protein_coding		4	-1	4138819	721
ENSMUSG00000111447	antisense	Gm48249	ENSMUST00000217535	antisense		10	-1	20286631	673
ENSMUSG00000053333	protein_coding	Dis3l2	ENSMUST00000168237	protein_coding	alternative2	1	1	86703819	3154
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000135382	retained_intron		8	1	84388440	1150
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000153988	protein_coding		16	1	94370749	1607
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000148636	retained_intron		11	-1	32234401	680
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000137950	nonsense_mediated_decay		11	-1	32267629	1602
ENSMUSG00000086454	processed_transcript	Platr14	ENSMUST00000125854	processed_transcript		2	1	104559184	582
ENSMUSG00000111447	antisense	Gm48249	ENSMUST00000213372	antisense		10	-1	20286647	807
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000109389	protein_coding		11	-1	32267547	1642
ENSMUSG00000085996	processed_transcript	A830012C17Rik	ENSMUST00000131498	processed_transcript		4	1	4138321	1665
ENSMUSG00000086454	processed_transcript	Platr14	ENSMUST00000150581	processed_transcript		2	1	104567197	334
ENSMUSG00000053528	lincRNA	A530021J07Rik	ENSMUST00000208611	lincRNA		7	1	83061783	1400
ENSMUSG00000053528	lincRNA	A530021J07Rik	ENSMUST00000208699	lincRNA		7	1	83084381	1717
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000200902	processed_transcript		18	1	69348590	617
ENSMUSG00000111447	antisense	Gm48249	ENSMUST00000215889	antisense		10	-1	20286626	617
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000212660	nonsense_mediated_decay		8	1	94977109	3011
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000121390	protein_coding	principal3	8	1	84415364	7926
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000125256	retained_intron		11	-1	32239941	705
ENSMUSG00000085155	processed_pseudogene	Gm11780	ENSMUST00000136880	processed_pseudogene		4	-1	4528719	516
ENSMUSG00000093930	protein_coding	Hmgcs1	ENSMUST00000179869	protein_coding	principal1	13	1	119690446	3245
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000129573	retained_intron		11	-1	32238036	762
ENSMUSG00000086454	processed_transcript	Platr14	ENSMUST00000127237	processed_transcript		2	1	104559459	707
ENSMUSG00000053528	lincRNA	A530021J07Rik	ENSMUST00000207727	lincRNA		7	1	83148470	1406
ENSMUSG00000086454	processed_transcript	Platr14	ENSMUST00000127350	processed_transcript		2	1	104559192	536
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000146890	retained_intron		11	-1	32254059	713
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000149526	nonsense_mediated_decay		11	-1	32267658	537
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201537	protein_coding		18	1	69348669	876
ENSMUSG00000053528	lincRNA	A530021J07Rik	ENSMUST00000208111	lincRNA		7	1	83178812	308
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000122053	protein_coding	alternative2	8	1	84415377	7589
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000123411	processed_transcript		11	-1	32250178	411
ENSMUSG00000013974	protein_coding	Mcemp1	ENSMUST00000014118	protein_coding	principal1	8	1	3665754	1494
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201124	protein_coding		18	1	69348944	733
ENSMUSG00000053528	lincRNA	A530021J07Rik	ENSMUST00000066005	lincRNA		7	1	83148644	414
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000127657	processed_transcript		11	-1	32250278	602
ENSMUSG00000086454	processed_transcript	Platr14	ENSMUST00000146553	processed_transcript		2	1	104559163	770
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000215756	protein_coding		8	1	84415784	7503
ENSMUSG00000071064	protein_coding	Zfp827	ENSMUST00000119254	protein_coding		8	1	79028587	4549
ENSMUSG00000093930	protein_coding	Hmgcs1	ENSMUST00000226092	retained_intron		13	1	119690462	1747
ENSMUSG00000018697	protein_coding	Aatf	ENSMUST00000018841	protein_coding	principal1	11	-1	84513522	1822
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202458	protein_coding		18	1	69415897	2610
ENSMUSG00000117419	unprocessed_pseudogene	Gm7930	ENSMUST00000234371	unprocessed_pseudogene		18	-1	30429861	467
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000129010	protein_coding		11	-1	32267615	623
ENSMUSG00000053333	protein_coding	Dis3l2	ENSMUST00000189044	retained_intron		1	1	86703828	5241
ENSMUSG00000086454	processed_transcript	Platr14	ENSMUST00000136364	processed_transcript		2	1	104559179	677
ENSMUSG00000093930	protein_coding	Hmgcs1	ENSMUST00000224188	protein_coding	principal1	13	1	119690464	3464
ENSMUSG00000020289	protein_coding	Nprl3	ENSMUST00000132856	processed_transcript		11	-1	32267551	406
ENSMUSG00000082628	processed_pseudogene	Gm12566	ENSMUST00000121479	processed_pseudogene		4	-1	45136608	359
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000093271	protein_coding	principal1	8	1	94984371	3574
ENSMUSG00000114934	antisense	Gm48342	ENSMUST00000223791	antisense		13	-1	119704549	1899
ENSMUSG00000116652	protein_coding	B830017H08Rik	ENSMUST00000231909	protein_coding	alternative2	16	1	17833121	1658
ENSMUSG00000040738	protein_coding	Ints8	ENSMUST00000136545	processed_transcript		4	-1	11213185	1961
ENSMUSG00000116652	protein_coding	B830017H08Rik	ENSMUST00000235474	protein_coding	principal5	16	1	17833568	699
ENSMUSG00000051391	protein_coding	Ywhag	ENSMUST00000198270	protein_coding	principal1	5	-1	135934554	1610
ENSMUSG00000109335	processed_pseudogene	Gm44845	ENSMUST00000208773	processed_pseudogene		7	1	83234541	335
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000129620	processed_transcript		8	1	84547094	1639
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000211944	protein_coding		8	1	94984470	296
ENSMUSG00000109506	lincRNA	Gm44724	ENSMUST00000208251	lincRNA		7	-1	83356577	531
ENSMUSG00000109506	lincRNA	Gm44724	ENSMUST00000207119	lincRNA		7	-1	83356577	5548
ENSMUSG00000109506	lincRNA	Gm44724	ENSMUST00000208430	lincRNA		7	-1	83369429	998
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000126302	retained_intron		8	1	84571797	597
ENSMUSG00000053333	protein_coding	Dis3l2	ENSMUST00000190618	nonsense_mediated_decay		1	1	86703828	2969
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000212799	protein_coding		8	1	94985568	575
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000238337	protein_coding		8	1	84600494	2941
ENSMUSG00000071064	protein_coding	Zfp827	ENSMUST00000238669	protein_coding	principal1	8	1	79028587	4511
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000212141	protein_coding		8	1	94994274	995
ENSMUSG00000028973	protein_coding	Abcb8	ENSMUST00000138168	protein_coding		5	1	24393663	830
ENSMUSG00000053333	protein_coding	Dis3l2	ENSMUST00000065694	protein_coding	principal3	1	1	86703843	3085
ENSMUSG00000042729	protein_coding	Wdr74	ENSMUST00000210512	protein_coding		19	1	8735827	1078
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000212976	protein_coding		8	1	94994416	774
ENSMUSG00000071064	protein_coding	Zfp827	ENSMUST00000148713	protein_coding		8	1	79118327	5230
ENSMUSG00000053333	protein_coding	Dis3l2	ENSMUST00000186682	retained_intron		1	1	86857371	735
ENSMUSG00000051391	protein_coding	Ywhag	ENSMUST00000055808	protein_coding	principal1	5	-1	135934599	3520
ENSMUSG00000018697	protein_coding	Aatf	ENSMUST00000127042	processed_transcript		11	-1	84491550	1009
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000143215	retained_intron		8	1	84601431	740
ENSMUSG00000006538	protein_coding	Ihh	ENSMUST00000164097	protein_coding	principal1	1	-1	74951672	2468
ENSMUSG00000100225	processed_pseudogene	Gm29097	ENSMUST00000190273	processed_pseudogene		1	-1	86765365	422
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000212995	protein_coding		8	1	94994478	709
ENSMUSG00000018697	protein_coding	Aatf	ENSMUST00000141093	retained_intron		11	-1	84449533	624
ENSMUSG00000102383	TEC	Gm38142	ENSMUST00000194093	TEC		1	1	86826101	3555
ENSMUSG00000006538	protein_coding	Ihh	ENSMUST00000189364	retained_intron		1	-1	74951442	1385
ENSMUSG00000071064	protein_coding	Zfp827	ENSMUST00000145827	nonsense_mediated_decay		8	1	79120483	3115
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000212956	protein_coding		8	1	94994750	598
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000141981	retained_intron		8	1	84601444	1153
ENSMUSG00000071064	protein_coding	Zfp827	ENSMUST00000211475	retained_intron		8	1	79174185	2979
ENSMUSG00000084106	processed_pseudogene	Gm6136	ENSMUST00000120149	processed_pseudogene		1	-1	86909683	891
ENSMUSG00000051391	protein_coding	Ywhag	ENSMUST00000129581	retained_intron		5	-1	135934597	2238
ENSMUSG00000108161	lincRNA	Gm32914	ENSMUST00000203815	lincRNA		6	-1	146001763	2228
ENSMUSG00000002808	protein_coding	Epdr1	ENSMUST00000002885	protein_coding	principal2	13	-1	19619804	2363
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000212531	protein_coding		8	1	94994761	499
ENSMUSG00000018697	protein_coding	Aatf	ENSMUST00000148434	retained_intron		11	-1	84513522	1992
ENSMUSG00000051391	protein_coding	Ywhag	ENSMUST00000126639	processed_transcript		5	-1	135934616	685
ENSMUSG00000042729	protein_coding	Wdr74	ENSMUST00000049424	protein_coding	principal1	19	1	8735839	1204
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000211984	protein_coding		8	1	94995661	705
ENSMUSG00000051391	protein_coding	Ywhag	ENSMUST00000126192	processed_transcript		5	-1	135934550	417
ENSMUSG00000070855	protein_coding	Olfr1116	ENSMUST00000216364	protein_coding	alternative2	2	1	87267534	9655
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000144879	retained_intron		8	1	84601470	1742
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000212118	protein_coding		8	1	95000881	614
ENSMUSG00000082276	processed_pseudogene	Gm13885	ENSMUST00000117569	processed_pseudogene		2	-1	104583781	187
ENSMUSG00000070855	protein_coding	Olfr1116	ENSMUST00000090717	protein_coding	principal2	2	1	87268846	924
ENSMUSG00000040738	protein_coding	Ints8	ENSMUST00000137054	processed_transcript		4	-1	11235558	2145
ENSMUSG00000071064	protein_coding	Zfp827	ENSMUST00000155960	retained_intron		8	1	79175810	2058
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000153691	protein_coding		8	1	84601973	549
ENSMUSG00000002808	protein_coding	Epdr1	ENSMUST00000220944	protein_coding	alternative2	13	-1	19619927	563
ENSMUSG00000082225	processed_pseudogene	Gm13728	ENSMUST00000117471	processed_pseudogene		2	1	87278915	400
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000211806	retained_intron		8	1	95006147	343
ENSMUSG00000078506	protein_coding	Aadacl4fm2	ENSMUST00000105748	protein_coding	principal1	4	-1	144565134	1221
ENSMUSG00000071064	protein_coding	Zfp827	ENSMUST00000129613	protein_coding		8	1	79178975	765
ENSMUSG00000085310	antisense	Gm11491	ENSMUST00000129441	antisense		11	-1	87126905	1118
ENSMUSG00000034656	protein_coding	Cacna1a	ENSMUST00000130507	processed_transcript		8	1	84638991	249
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000142030	protein_coding		17	1	6106479	735
ENSMUSG00000089732	polymorphic_pseudogene	Olfr1117-ps1	ENSMUST00000118736	polymorphic_pseudogene	principal1	2	1	87283212	984
ENSMUSG00000002808	protein_coding	Epdr1	ENSMUST00000221014	protein_coding		13	-1	19619788	692
ENSMUSG00000085310	antisense	Gm11491	ENSMUST00000155828	antisense		11	-1	87126958	696
ENSMUSG00000071064	protein_coding	Zfp827	ENSMUST00000098614	protein_coding		8	1	79028437	7581
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000151732	processed_transcript		17	1	6106555	789
ENSMUSG00000083807	processed_pseudogene	Gm13466	ENSMUST00000121515	processed_pseudogene		2	1	45809472	999
ENSMUSG00000002808	protein_coding	Epdr1	ENSMUST00000220755	processed_transcript		13	-1	19619738	704
ENSMUSG00000108074	TEC	4930595O18Rik	ENSMUST00000205099	TEC		6	-1	100923156	607
ENSMUSG00000070610	processed_pseudogene	Gm13127	ENSMUST00000118978	processed_pseudogene		4	1	144587244	1389
ENSMUSG00000111752	processed_transcript	Gm38575	ENSMUST00000215824	lincRNA		10	-1	85266322	1490
ENSMUSG00000091785	processed_pseudogene	Rpl29-ps5	ENSMUST00000164794	processed_pseudogene		18	-1	30459544	463
ENSMUSG00000028794	protein_coding	A3galt2	ENSMUST00000106077	protein_coding	alternative2	4	1	128755364	2114
ENSMUSG00000082679	processed_pseudogene	Gm13469	ENSMUST00000118231	processed_pseudogene		2	-1	46406569	350
ENSMUSG00000111752	processed_transcript	Gm38575	ENSMUST00000214496	retained_intron		10	-1	85266392	3168
ENSMUSG00000031785	protein_coding	Adgrg1	ENSMUST00000211911	retained_intron		8	1	95007520	713
ENSMUSG00000108804	TEC	Gm30437	ENSMUST00000206086	TEC		6	1	91411513	1201
ENSMUSG00000108056	processed_pseudogene	Gm43941	ENSMUST00000203303	processed_pseudogene		6	1	100960989	1073
ENSMUSG00000004070	protein_coding	Hmox2	ENSMUST00000004172	protein_coding	principal1	16	1	4726363	1730
ENSMUSG00000097693	transcribed_processed_pseudogene	4930471M09Rik	ENSMUST00000206771	transcribed_processed_pseudogene		6	-1	91430485	927
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000146758	processed_transcript		17	1	6106858	3147
ENSMUSG00000002257	protein_coding	Def6	ENSMUST00000002327	protein_coding	principal1	17	1	28207778	2277
ENSMUSG00000111752	processed_transcript	Gm38575	ENSMUST00000213881	lincRNA		10	-1	85266327	652
ENSMUSG00000108836	lincRNA	Gm44813	ENSMUST00000207921	lincRNA		7	1	70571322	361
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000152672	processed_transcript		17	1	6106858	1718
ENSMUSG00000040738	protein_coding	Ints8	ENSMUST00000108319	protein_coding	principal1	4	-1	11254258	3220
ENSMUSG00000109021	lincRNA	Gm44812	ENSMUST00000207627	lincRNA		7	1	70574834	5349
ENSMUSG00000083550	processed_pseudogene	Gm13729	ENSMUST00000120328	processed_pseudogene		2	1	87304739	406
ENSMUSG00000028794	protein_coding	A3galt2	ENSMUST00000030585	protein_coding	principal2	4	1	128759258	3390
ENSMUSG00000109021	lincRNA	Gm44812	ENSMUST00000208999	lincRNA		7	1	70576484	1285
ENSMUSG00000002257	protein_coding	Def6	ENSMUST00000233560	protein_coding		17	1	28207803	581
ENSMUSG00000042729	protein_coding	Wdr74	ENSMUST00000210592	retained_intron		19	1	8735845	846
ENSMUSG00000040738	protein_coding	Ints8	ENSMUST00000108318	protein_coding		4	-1	11254258	3169
ENSMUSG00000086644	lincRNA	Gm13470	ENSMUST00000123911	lincRNA		2	-1	46442710	421
ENSMUSG00000097693	transcribed_processed_pseudogene	4930471M09Rik	ENSMUST00000181849	processed_transcript		6	-1	91440854	1112
ENSMUSG00000109018	TEC	Gm44809	ENSMUST00000208305	TEC		7	1	70592890	993
ENSMUSG00000109294	lincRNA	Gm44808	ENSMUST00000208887	lincRNA		7	1	70638610	264
ENSMUSG00000097693	transcribed_processed_pseudogene	4930471M09Rik	ENSMUST00000206475	processed_transcript		6	-1	91440912	1990
ENSMUSG00000050490	processed_pseudogene	Psma5-ps	ENSMUST00000079684	processed_pseudogene		10	1	85313488	952
ENSMUSG00000002257	protein_coding	Def6	ENSMUST00000233958	protein_coding		17	1	28207826	432
ENSMUSG00000055159	bidirectional_promoter_lncRNA	4930583K01Rik	ENSMUST00000138180	bidirectional_promoter_lncRNA		7	1	118243865	925
ENSMUSG00000040738	protein_coding	Ints8	ENSMUST00000145252	processed_transcript		4	-1	11213752	372
ENSMUSG00000098240	processed_pseudogene	Gm4575	ENSMUST00000182991	processed_pseudogene		6	1	91428883	1002
ENSMUSG00000109013	TEC	Gm44723	ENSMUST00000207369	TEC		7	-1	83383141	4000
ENSMUSG00000104188	lincRNA	Gm37821	ENSMUST00000195476	lincRNA		1	-1	39057637	1843
ENSMUSG00000040738	protein_coding	Ints8	ENSMUST00000133031	processed_transcript		4	-1	11219902	657
ENSMUSG00000042729	protein_coding	Wdr74	ENSMUST00000236946	retained_intron		19	1	8735881	855
ENSMUSG00000108831	processed_pseudogene	Gm7957	ENSMUST00000207404	processed_pseudogene		7	1	83411977	2602
ENSMUSG00000083706	protein_coding	Olfr1118	ENSMUST00000216396	protein_coding	alternative2	2	1	87307581	4976
ENSMUSG00000042729	protein_coding	Wdr74	ENSMUST00000237673	processed_transcript		19	1	8735882	572
ENSMUSG00000002257	protein_coding	Def6	ENSMUST00000146724	processed_transcript		17	1	28207837	349
ENSMUSG00000004070	protein_coding	Hmox2	ENSMUST00000120232	protein_coding	principal1	16	1	4741581	1287
ENSMUSG00000116439	unprocessed_pseudogene	Gm49528	ENSMUST00000231182	unprocessed_pseudogene		16	-1	14483746	780
ENSMUSG00000083706	protein_coding	Olfr1118	ENSMUST00000121296	protein_coding	principal2	2	1	87308764	996
ENSMUSG00000040738	protein_coding	Ints8	ENSMUST00000147372	processed_transcript		4	-1	11235968	2604
ENSMUSG00000108980	lincRNA	Gm45155	ENSMUST00000207365	lincRNA		7	-1	118275363	596
ENSMUSG00000002257	protein_coding	Def6	ENSMUST00000233170	protein_coding		17	1	28207843	774
ENSMUSG00000109042	lincRNA	Gm44991	ENSMUST00000208669	lincRNA		7	1	83471708	479
ENSMUSG00000002257	protein_coding	Def6	ENSMUST00000233264	protein_coding		17	1	28207884	1155
ENSMUSG00000042729	protein_coding	Wdr74	ENSMUST00000237017	retained_intron		19	1	8737512	742
ENSMUSG00000039601	protein_coding	Rcan2	ENSMUST00000228972	protein_coding		17	1	43801351	1003
ENSMUSG00000103182	TEC	Gm37091	ENSMUST00000195455	TEC		1	-1	39083338	2087
ENSMUSG00000100680	lincRNA	1810044D09Rik	ENSMUST00000186472	lincRNA		6	1	91440987	486
ENSMUSG00000102643	lincRNA	Gm37547	ENSMUST00000193277	lincRNA		Y	1	25112581	2165
ENSMUSG00000103064	processed_pseudogene	Gm36968	ENSMUST00000193737	processed_pseudogene		Y	1	25117327	315
ENSMUSG00000042729	protein_coding	Wdr74	ENSMUST00000237531	processed_transcript		19	1	8739341	298
ENSMUSG00000083001	processed_pseudogene	Gm13250	ENSMUST00000117209	processed_pseudogene		4	1	134493222	753
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000145432	nonsense_mediated_decay		16	1	94370750	2973
ENSMUSG00000109454	processed_pseudogene	Gm34783	ENSMUST00000209159	processed_pseudogene		7	-1	70912820	303
ENSMUSG00000108810	processed_pseudogene	Gm44629	ENSMUST00000206951	processed_pseudogene		6	-1	91446866	1840
ENSMUSG00000002257	protein_coding	Def6	ENSMUST00000233205	processed_transcript		17	1	28209679	445
ENSMUSG00000102842	unprocessed_pseudogene	Gm38035	ENSMUST00000194427	unprocessed_pseudogene		Y	1	25153876	696
ENSMUSG00000083211	processed_pseudogene	Gm13737	ENSMUST00000119793	processed_pseudogene		2	-1	87323996	232
ENSMUSG00000103714	unprocessed_pseudogene	Gm20857	ENSMUST00000194766	unprocessed_pseudogene		Y	-1	25239462	657
ENSMUSG00000004070	protein_coding	Hmox2	ENSMUST00000140367	protein_coding		16	1	4756845	584
ENSMUSG00000042729	protein_coding	Wdr74	ENSMUST00000238116	retained_intron		19	1	8739668	577
ENSMUSG00000002257	protein_coding	Def6	ENSMUST00000233534	protein_coding		17	1	28217033	385
ENSMUSG00000081907	processed_pseudogene	Gm13731	ENSMUST00000117332	processed_pseudogene		2	1	87333802	196
ENSMUSG00000036620	protein_coding	Mgat4b	ENSMUST00000041725	protein_coding	principal1	11	1	50225335	2429
ENSMUSG00000109557	processed_pseudogene	Gm18463	ENSMUST00000207258	processed_pseudogene		7	1	21685414	474
ENSMUSG00000109532	lincRNA	Gm42397	ENSMUST00000208276	lincRNA		7	1	70870913	750
ENSMUSG00000085141	processed_transcript	Gm13429	ENSMUST00000123224	processed_transcript		2	1	36202314	669
ENSMUSG00000111093	unprocessed_pseudogene	Olfr1119-ps1	ENSMUST00000215282	unprocessed_pseudogene		2	1	87352839	634
ENSMUSG00000109276	processed_pseudogene	Gm4548	ENSMUST00000208487	processed_pseudogene		7	1	21720460	509
ENSMUSG00000109532	lincRNA	Gm42397	ENSMUST00000208692	lincRNA		7	1	70870913	1449
ENSMUSG00000109532	lincRNA	Gm42397	ENSMUST00000207709	lincRNA		7	1	70870916	631
ENSMUSG00000085141	processed_transcript	Gm13429	ENSMUST00000138755	processed_transcript		2	1	36202822	424
ENSMUSG00000109532	lincRNA	Gm42397	ENSMUST00000208808	lincRNA		7	1	70870992	1358
ENSMUSG00000085141	processed_transcript	Gm13429	ENSMUST00000128242	processed_transcript		2	1	36210772	692
ENSMUSG00000096513	protein_coding	Vmn1r247	ENSMUST00000172863	protein_coding	principal1	7	-1	21761475	945
ENSMUSG00000108067	TEC	Gm43953	ENSMUST00000203709	TEC		6	-1	101328205	2867
ENSMUSG00000109532	lincRNA	Gm42397	ENSMUST00000207472	lincRNA		7	1	70871000	2002
ENSMUSG00000070609	protein_coding	Aadacl4	ENSMUST00000094510	protein_coding	principal1	4	1	144613707	1224
ENSMUSG00000097834	antisense	Gm26911	ENSMUST00000181770	antisense		6	1	101198569	1737
ENSMUSG00000004070	protein_coding	Hmox2	ENSMUST00000118885	protein_coding	principal1	16	1	4756903	1392
ENSMUSG00000109532	lincRNA	Gm42397	ENSMUST00000208057	lincRNA		7	1	70871068	568
ENSMUSG00000096760	protein_coding	Vmn1r248	ENSMUST00000105196	protein_coding	principal1	7	-1	21796728	918
ENSMUSG00000097834	antisense	Gm26911	ENSMUST00000204244	antisense		6	1	101198586	763
ENSMUSG00000036620	protein_coding	Mgat4b	ENSMUST00000151803	nonsense_mediated_decay		11	1	50230740	1725
ENSMUSG00000020492	protein_coding	Ska2	ENSMUST00000020794	protein_coding	principal1	11	1	87109234	3037
ENSMUSG00000108856	lincRNA	Gm35309	ENSMUST00000208337	lincRNA		7	1	118329486	478
ENSMUSG00000039601	protein_coding	Rcan2	ENSMUST00000229744	protein_coding	principal4	17	1	43801844	2914
ENSMUSG00000110388	antisense	Gm30329	ENSMUST00000211572	antisense		8	1	79225930	3077
ENSMUSG00000004070	protein_coding	Hmox2	ENSMUST00000121529	protein_coding		16	1	4756994	856
ENSMUSG00000118412	unitary_pseudogene	Gm32766	ENSMUST00000238497	unitary_pseudogene		7	-1	118369717	549
ENSMUSG00000113073	TEC	Gm48261	ENSMUST00000223208	TEC		13	1	8282248	3856
ENSMUSG00000097834	antisense	Gm26911	ENSMUST00000204781	antisense		6	1	101198658	369
ENSMUSG00000039601	protein_coding	Rcan2	ENSMUST00000044895	protein_coding	principal4	17	1	43804003	3226
ENSMUSG00000072421	processed_pseudogene	Gm10357	ENSMUST00000159886	processed_pseudogene		13	-1	8290113	264
ENSMUSG00000036620	protein_coding	Mgat4b	ENSMUST00000133714	retained_intron		11	1	50230748	511
ENSMUSG00000107806	processed_pseudogene	Gm19726	ENSMUST00000205008	processed_pseudogene		6	-1	101146479	240
ENSMUSG00000113810	TEC	Gm48259	ENSMUST00000221052	TEC		13	1	8278604	686
ENSMUSG00000036620	protein_coding	Mgat4b	ENSMUST00000122977	retained_intron		11	1	50234023	652
ENSMUSG00000107954	TEC	Gm43942	ENSMUST00000204522	TEC		6	1	101144292	2859
ENSMUSG00000113742	TEC	Gm48262	ENSMUST00000220604	TEC		13	1	8553020	4616
ENSMUSG00000020492	protein_coding	Ska2	ENSMUST00000142263	processed_transcript		11	1	87109251	861
ENSMUSG00000107448	TEC	Gm43947	ENSMUST00000203019	TEC		6	-1	101345850	959
ENSMUSG00000113978	processed_pseudogene	Gm48260	ENSMUST00000223414	processed_pseudogene		13	-1	8299143	3829
ENSMUSG00000020492	protein_coding	Ska2	ENSMUST00000131202	processed_transcript		11	1	87115869	673
ENSMUSG00000078505	protein_coding	Aadacl4fm4	ENSMUST00000105747	protein_coding	principal1	4	-1	144686368	1224
ENSMUSG00000069089	protein_coding	Cdk7	ENSMUST00000091299	protein_coding	principal1	13	-1	100730939	1988
ENSMUSG00000103145	TEC	Gm37744	ENSMUST00000194616	TEC		1	1	74954252	1590
ENSMUSG00000107887	lincRNA	Gm43950	ENSMUST00000204767	lincRNA		6	1	101028022	996
ENSMUSG00000108076	TEC	9530086O07Rik	ENSMUST00000203503	TEC		6	-1	101288510	2685
ENSMUSG00000085143	antisense	Gm11520	ENSMUST00000122837	antisense		11	1	95310429	630
ENSMUSG00000069089	protein_coding	Cdk7	ENSMUST00000225990	protein_coding		13	-1	100730900	1159
ENSMUSG00000107427	antisense	Gm43948	ENSMUST00000203474	antisense		6	1	101059171	2376
ENSMUSG00000107720	TEC	Gm43946	ENSMUST00000204058	TEC		6	-1	101348830	886
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000130960	processed_transcript		16	1	94370751	416
ENSMUSG00000031682	protein_coding	1700011L22Rik	ENSMUST00000034109	protein_coding	principal1	8	-1	79248570	964
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000139513	protein_coding		16	1	94370751	671
ENSMUSG00000039601	protein_coding	Rcan2	ENSMUST00000177857	protein_coding	alternative1	17	1	43952999	987
ENSMUSG00000020921	protein_coding	Tmem101	ENSMUST00000021296	protein_coding	principal1	11	-1	102156404	1574
ENSMUSG00000069089	protein_coding	Cdk7	ENSMUST00000225946	retained_intron		13	-1	100711940	681
ENSMUSG00000031682	protein_coding	1700011L22Rik	ENSMUST00000210889	processed_transcript		8	-1	79248543	463
ENSMUSG00000087187	lincRNA	Gm13431	ENSMUST00000147012	lincRNA		2	1	36216777	388
ENSMUSG00000020921	protein_coding	Tmem101	ENSMUST00000143986	processed_transcript		11	-1	102156347	851
ENSMUSG00000020921	protein_coding	Tmem101	ENSMUST00000136434	processed_transcript		11	-1	102156355	302
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111678	protein_coding	alternative1	2	-1	84650745	5870
ENSMUSG00000101258	antisense	Gm29477	ENSMUST00000189860	antisense		11	-1	95384507	499
ENSMUSG00000098189	processed_pseudogene	Gm8604	ENSMUST00000183150	processed_pseudogene		3	1	71859185	965
ENSMUSG00000103465	processed_pseudogene	Gm37617	ENSMUST00000194309	processed_pseudogene		3	1	71894835	159
ENSMUSG00000085509	antisense	Gm11521	ENSMUST00000143302	antisense		11	-1	95337408	329
ENSMUSG00000069089	protein_coding	Cdk7	ENSMUST00000225056	processed_transcript		13	-1	100730929	1595
ENSMUSG00000103279	processed_pseudogene	Gm3351	ENSMUST00000193454	processed_pseudogene		3	-1	72050602	505
ENSMUSG00000069089	protein_coding	Cdk7	ENSMUST00000225578	retained_intron		13	-1	100719370	763
ENSMUSG00000030738	protein_coding	Eif3c	ENSMUST00000032992	protein_coding	principal1	7	-1	126566411	3383
ENSMUSG00000087187	lincRNA	Gm13431	ENSMUST00000122948	lincRNA		2	1	36216825	476
ENSMUSG00000087187	lincRNA	Gm13431	ENSMUST00000129699	lincRNA		2	1	36220490	366
ENSMUSG00000116695	lincRNA	4930578N18Rik	ENSMUST00000232455	lincRNA		16	1	76122613	511
ENSMUSG00000030738	protein_coding	Eif3c	ENSMUST00000180459	protein_coding		7	-1	126566358	926
ENSMUSG00000109865	protein_coding	Hspa14	ENSMUST00000027961	protein_coding	principal1	2	-1	3512814	1795
ENSMUSG00000116695	lincRNA	4930578N18Rik	ENSMUST00000231285	lincRNA		16	1	76122655	458
ENSMUSG00000039601	protein_coding	Rcan2	ENSMUST00000044792	protein_coding	alternative1	17	1	43953115	3313
ENSMUSG00000030738	protein_coding	Eif3c	ENSMUST00000205949	nonsense_mediated_decay		7	-1	126566204	480
ENSMUSG00000098089	processed_pseudogene	Gm26915	ENSMUST00000183080	processed_pseudogene		16	1	76144985	748
ENSMUSG00000109865	protein_coding	Hspa14	ENSMUST00000129505	retained_intron		2	-1	3490162	559
ENSMUSG00000028973	protein_coding	Abcb8	ENSMUST00000115077	protein_coding	principal1	5	1	24393676	3074
ENSMUSG00000109865	protein_coding	Hspa14	ENSMUST00000156008	retained_intron		2	-1	3492042	675
ENSMUSG00000004071	protein_coding	Cdip1	ENSMUST00000147225	protein_coding		16	-1	4770097	739
ENSMUSG00000039601	protein_coding	Rcan2	ENSMUST00000229240	protein_coding		17	1	43953251	584
ENSMUSG00000109865	protein_coding	Hspa14	ENSMUST00000139485	retained_intron		2	-1	3498118	845
ENSMUSG00000109865	protein_coding	Hspa14	ENSMUST00000135157	retained_intron		2	-1	3503016	1010
ENSMUSG00000039601	protein_coding	Rcan2	ENSMUST00000229939	protein_coding		17	1	44026710	536
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000141856	protein_coding		16	1	94370751	711
ENSMUSG00000109865	protein_coding	Hspa14	ENSMUST00000148167	retained_intron		2	-1	3512743	477
ENSMUSG00000085805	lincRNA	Gm14145	ENSMUST00000133385	lincRNA		2	1	151104892	508
ENSMUSG00000020464	protein_coding	Pnpt1	ENSMUST00000154924	processed_transcript		11	1	29130744	3368
ENSMUSG00000037022	protein_coding	Mmaa	ENSMUST00000048718	protein_coding	principal1	8	-1	79294937	5650
ENSMUSG00000028973	protein_coding	Abcb8	ENSMUST00000115074	processed_transcript		5	1	24394396	1657
ENSMUSG00000020464	protein_coding	Pnpt1	ENSMUST00000148173	processed_transcript		11	1	29130748	459
ENSMUSG00000067352	lincRNA	Gm14149	ENSMUST00000123048	lincRNA		2	1	151205195	1853
ENSMUSG00000067352	lincRNA	Gm14149	ENSMUST00000170215	lincRNA		2	1	151224371	702
ENSMUSG00000082950	processed_pseudogene	Gm7834	ENSMUST00000117560	processed_pseudogene		X	-1	51212947	437
ENSMUSG00000005505	protein_coding	Kbtbd4	ENSMUST00000111464	protein_coding	alternative1	2	1	90904740	2343
ENSMUSG00000028973	protein_coding	Abcb8	ENSMUST00000136414	retained_intron		5	1	24394408	929
ENSMUSG00000100188	lincRNA	Gm29561	ENSMUST00000187838	lincRNA		3	-1	104664139	631
ENSMUSG00000028973	protein_coding	Abcb8	ENSMUST00000198166	protein_coding		5	1	24400598	518
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111690	protein_coding		2	-1	84650745	5945
ENSMUSG00000081350	processed_pseudogene	Gm5388	ENSMUST00000120059	processed_pseudogene		X	-1	51219993	1117
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111695	protein_coding	alternative1	2	-1	84650745	6344
ENSMUSG00000037022	protein_coding	Mmaa	ENSMUST00000210231	nonsense_mediated_decay		8	-1	79294680	1685
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111677	protein_coding		2	-1	84650745	5789
ENSMUSG00000028973	protein_coding	Abcb8	ENSMUST00000127816	retained_intron		5	1	24402254	675
ENSMUSG00000029344	protein_coding	Tpst2	ENSMUST00000031287	protein_coding	principal1	5	1	112276691	1835
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111698	protein_coding		2	-1	84650745	5850
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000099941	protein_coding		2	-1	84650745	5783
ENSMUSG00000052406	protein_coding	Rexo4	ENSMUST00000064244	protein_coding	alternative2	2	-1	26964386	2281
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111676	protein_coding		2	-1	84650745	5852
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111694	protein_coding	alternative1	2	-1	84650745	6362
ENSMUSG00000029344	protein_coding	Tpst2	ENSMUST00000134071	retained_intron		5	1	112276704	1607
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111675	protein_coding		2	-1	84650745	5089
ENSMUSG00000028973	protein_coding	Abcb8	ENSMUST00000136459	retained_intron		5	1	24405815	2340
ENSMUSG00000052406	protein_coding	Rexo4	ENSMUST00000123126	processed_transcript		2	-1	26956586	644
ENSMUSG00000005505	protein_coding	Kbtbd4	ENSMUST00000090682	protein_coding	principal3	2	1	90904743	2437
ENSMUSG00000028973	protein_coding	Abcb8	ENSMUST00000151535	protein_coding		5	1	24406408	940
ENSMUSG00000052406	protein_coding	Rexo4	ENSMUST00000145546	processed_transcript		2	-1	26955684	359
ENSMUSG00000087337	lincRNA	Gm14144	ENSMUST00000128602	lincRNA		2	-1	151278836	1721
ENSMUSG00000052406	protein_coding	Rexo4	ENSMUST00000136710	protein_coding		2	-1	26964279	1121
ENSMUSG00000101641	TEC	Gm29560	ENSMUST00000191526	TEC		3	-1	104670010	881
ENSMUSG00000005505	protein_coding	Kbtbd4	ENSMUST00000124284	processed_transcript		2	1	90904769	340
ENSMUSG00000052406	protein_coding	Rexo4	ENSMUST00000139635	processed_transcript		2	-1	26956319	600
ENSMUSG00000081188	processed_pseudogene	Gm14621	ENSMUST00000117709	processed_pseudogene		X	-1	51239532	689
ENSMUSG00000029344	protein_coding	Tpst2	ENSMUST00000071455	protein_coding	principal1	5	1	112276707	1741
ENSMUSG00000028973	protein_coding	Abcb8	ENSMUST00000073076	protein_coding	principal1	5	1	24394155	2939
ENSMUSG00000052406	protein_coding	Rexo4	ENSMUST00000135752	processed_transcript		2	-1	26964278	737
ENSMUSG00000005505	protein_coding	Kbtbd4	ENSMUST00000140945	processed_transcript		2	1	90905075	469
ENSMUSG00000029344	protein_coding	Tpst2	ENSMUST00000151947	protein_coding		5	1	112288762	294
ENSMUSG00000052406	protein_coding	Rexo4	ENSMUST00000128130	processed_transcript		2	-1	26960266	575
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000149756	protein_coding		17	1	6106891	8784
ENSMUSG00000005505	protein_coding	Kbtbd4	ENSMUST00000155372	processed_transcript		2	1	90909164	632
ENSMUSG00000029344	protein_coding	Tpst2	ENSMUST00000198502	protein_coding		5	1	112303896	442
ENSMUSG00000052406	protein_coding	Rexo4	ENSMUST00000128401	processed_transcript		2	-1	26964324	379
ENSMUSG00000051396	protein_coding	Gm45902	ENSMUST00000124331	protein_coding	principal1	2	-1	3512757	4314
ENSMUSG00000029344	protein_coding	Tpst2	ENSMUST00000140262	nonsense_mediated_decay		5	1	112308291	388
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000126982	processed_transcript		17	1	6107400	906
ENSMUSG00000052406	protein_coding	Rexo4	ENSMUST00000114020	protein_coding	principal2	2	-1	26964386	2278
ENSMUSG00000038893	protein_coding	Fam117a	ENSMUST00000037502	protein_coding	principal1	11	1	95337018	2317
ENSMUSG00000029344	protein_coding	Tpst2	ENSMUST00000139482	retained_intron		5	1	112312894	471
ENSMUSG00000051396	protein_coding	Gm45902	ENSMUST00000140494	protein_coding	principal1	2	-1	3512790	2390
ENSMUSG00000029344	protein_coding	Tpst2	ENSMUST00000239473	protein_coding		5	1	112276707	1813
ENSMUSG00000107447	processed_pseudogene	Gm44054	ENSMUST00000203814	processed_pseudogene		6	1	50599869	372
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000067232	protein_coding	principal2	2	-1	84650676	6119
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000145340	processed_transcript		17	1	6118294	1509
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000144124	processed_transcript		17	1	6118294	722
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111689	protein_coding		2	-1	84650745	5961
ENSMUSG00000025013	protein_coding	Tll2	ENSMUST00000025986	protein_coding	principal2	19	-1	41206835	4658
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111687	protein_coding		2	-1	84650745	6030
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201181	protein_coding		18	1	69499389	508
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111692	protein_coding		2	-1	84650745	6170
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000207214	protein_coding		18	1	69500670	787
ENSMUSG00000052551	protein_coding	Adarb2	ENSMUST00000064473	protein_coding	principal1	13	1	8202866	6721
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111685	protein_coding		2	-1	84650745	5985
ENSMUSG00000111266	lincRNA	Gm30570	ENSMUST00000213553	lincRNA		10	-1	4213114	2651
ENSMUSG00000035357	protein_coding	Pdzrn3	ENSMUST00000075994	protein_coding	principal1	6	-1	101377897	4104
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111686	protein_coding		2	-1	84650745	6061
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111688	protein_coding		2	-1	84650745	6146
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111693	protein_coding		2	-1	84650745	6255
ENSMUSG00000094841	lincRNA	Gm10610	ENSMUST00000207184	lincRNA		7	-1	83550258	2693
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201094	protein_coding		18	1	69500697	2172
ENSMUSG00000026483	protein_coding	Fam129a	ENSMUST00000148810	protein_coding	principal2	1	1	151571373	6531
ENSMUSG00000052551	protein_coding	Adarb2	ENSMUST00000223223	retained_intron		13	1	8202878	3887
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111684	protein_coding		2	-1	84650745	6021
ENSMUSG00000094841	lincRNA	Gm10610	ENSMUST00000177929	lincRNA		7	-1	83550258	1834
ENSMUSG00000094841	lincRNA	Gm10610	ENSMUST00000208877	lincRNA		7	-1	83550256	1206
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000141059	retained_intron		17	1	6138148	5223
ENSMUSG00000052551	protein_coding	Adarb2	ENSMUST00000139438	processed_transcript		13	1	8202908	1659
ENSMUSG00000004071	protein_coding	Cdip1	ENSMUST00000004173	protein_coding	principal1	16	-1	4789990	3953
ENSMUSG00000035357	protein_coding	Pdzrn3	ENSMUST00000239140	protein_coding		6	-1	101199186	1808
ENSMUSG00000034203	protein_coding	Chchd4	ENSMUST00000040835	protein_coding	principal1	6	-1	91473546	3472
ENSMUSG00000052551	protein_coding	Adarb2	ENSMUST00000135574	nonsense_mediated_decay		13	1	8202913	4318
ENSMUSG00000025013	protein_coding	Tll2	ENSMUST00000169941	protein_coding	alternative2	19	-1	41206774	3318
ENSMUSG00000052551	protein_coding	Adarb2	ENSMUST00000123187	protein_coding		13	1	8202922	4002
ENSMUSG00000026483	protein_coding	Fam129a	ENSMUST00000097541	nonsense_mediated_decay		1	1	151571452	4010
ENSMUSG00000035357	protein_coding	Pdzrn3	ENSMUST00000124884	processed_transcript		6	-1	101355010	666
ENSMUSG00000035357	protein_coding	Pdzrn3	ENSMUST00000144505	retained_intron		6	-1	101199200	2969
ENSMUSG00000052551	protein_coding	Adarb2	ENSMUST00000223148	processed_transcript		13	1	8758329	427
ENSMUSG00000004071	protein_coding	Cdip1	ENSMUST00000140187	retained_intron		16	-1	4771512	3811
ENSMUSG00000034203	protein_coding	Chchd4	ENSMUST00000205802	retained_intron		6	-1	91473449	1854
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000200703	protein_coding		18	1	69500836	831
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000143145	nonsense_mediated_decay		16	1	94370757	3614
ENSMUSG00000035357	protein_coding	Pdzrn3	ENSMUST00000151175	processed_transcript		6	-1	101377342	621
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202765	protein_coding		18	1	69500958	802
ENSMUSG00000004071	protein_coding	Cdip1	ENSMUST00000118703	protein_coding	principal1	16	-1	4790292	2554
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000154243	nonsense_mediated_decay		16	1	94370767	632
ENSMUSG00000098026	processed_pseudogene	Gm27014	ENSMUST00000182658	processed_pseudogene		12	1	54963064	937
ENSMUSG00000103660	lincRNA	Gm30705	ENSMUST00000195660	lincRNA		Y	-1	25302982	1495
ENSMUSG00000092233	protein_coding	Gm20403	ENSMUST00000173803	protein_coding	principal1	12	-1	54986529	372
ENSMUSG00000083866	processed_pseudogene	Gm13472	ENSMUST00000120948	processed_pseudogene		2	1	48388037	314
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000039655	protein_coding	principal1	17	1	6138148	9687
ENSMUSG00000029670	protein_coding	Ing3	ENSMUST00000031680	protein_coding	principal1	6	1	21949571	3800
ENSMUSG00000004071	protein_coding	Cdip1	ENSMUST00000117713	protein_coding		16	-1	4789930	1964
ENSMUSG00000026483	protein_coding	Fam129a	ENSMUST00000086267	processed_transcript		1	1	151677167	3245
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000153062	nonsense_mediated_decay		16	1	94370767	672
ENSMUSG00000004071	protein_coding	Cdip1	ENSMUST00000152667	retained_intron		16	-1	4790266	776
ENSMUSG00000103660	lincRNA	Gm30705	ENSMUST00000194784	lincRNA		Y	-1	25302530	615
ENSMUSG00000038893	protein_coding	Fam117a	ENSMUST00000129553	processed_transcript		11	1	95339931	524
ENSMUSG00000103660	lincRNA	Gm30705	ENSMUST00000195482	lincRNA		Y	-1	25302530	431
ENSMUSG00000026483	protein_coding	Fam129a	ENSMUST00000111875	protein_coding	alternative2	1	1	151571496	1296
ENSMUSG00000004071	protein_coding	Cdip1	ENSMUST00000229452	retained_intron		16	-1	4789935	4453
ENSMUSG00000034377	protein_coding	Tulp4	ENSMUST00000137063	protein_coding		17	1	6232652	2019
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000127911	processed_transcript		16	1	94370767	332
ENSMUSG00000094152	protein_coding	Slc6a16	ENSMUST00000213347	protein_coding	principal5	7	1	45241085	2865
ENSMUSG00000038893	protein_coding	Fam117a	ENSMUST00000143482	processed_transcript		11	1	95339962	702
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000152117	protein_coding		16	1	94370767	2572
ENSMUSG00000051639	processed_pseudogene	Fbl-ps2	ENSMUST00000061073	processed_pseudogene		17	-1	6122164	957
ENSMUSG00000086464	lincRNA	Gm15835	ENSMUST00000127697	lincRNA		16	1	4777743	356
ENSMUSG00000086353	lincRNA	Gm13481	ENSMUST00000127672	lincRNA		2	-1	48457245	1732
ENSMUSG00000103982	lincRNA	Gm37451	ENSMUST00000194718	lincRNA		Y	1	25332503	2167
ENSMUSG00000026483	protein_coding	Fam129a	ENSMUST00000134499	protein_coding		1	1	151571186	509
ENSMUSG00000038893	protein_coding	Fam117a	ENSMUST00000129290	processed_transcript		11	1	95339933	353
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000150097	protein_coding		16	1	94370780	654
ENSMUSG00000082278	processed_pseudogene	Gm13471	ENSMUST00000122057	processed_pseudogene		2	1	48140146	433
ENSMUSG00000063235	protein_coding	Ptpmt1	ENSMUST00000125001	processed_transcript		2	-1	90917857	3183
ENSMUSG00000083966	processed_pseudogene	Gm13482	ENSMUST00000119842	processed_pseudogene		2	1	48298908	254
ENSMUSG00000038893	protein_coding	Fam117a	ENSMUST00000155999	processed_transcript		11	1	95375467	400
ENSMUSG00000105208	lincRNA	Gm43525	ENSMUST00000196460	lincRNA		3	1	20308407	616
ENSMUSG00000087151	processed_transcript	Gm14022	ENSMUST00000143857	processed_transcript		2	-1	129065686	691
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000036811	protein_coding		2	-1	84649480	5126
ENSMUSG00000063235	protein_coding	Ptpmt1	ENSMUST00000111461	processed_transcript		2	-1	90918258	1529
ENSMUSG00000038893	protein_coding	Fam117a	ENSMUST00000132357	processed_transcript		11	1	95337020	442
ENSMUSG00000094152	protein_coding	Slc6a16	ENSMUST00000210163	retained_intron		7	1	45268150	1241
ENSMUSG00000094152	protein_coding	Slc6a16	ENSMUST00000179310	protein_coding	alternative2	7	1	45259031	2007
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000066177	protein_coding		2	-1	84650510	5044
ENSMUSG00000063235	protein_coding	Ptpmt1	ENSMUST00000155621	processed_transcript		2	-1	90917596	744
ENSMUSG00000081333	processed_pseudogene	Gm12307	ENSMUST00000120581	processed_pseudogene		11	-1	69730584	590
ENSMUSG00000063235	protein_coding	Ptpmt1	ENSMUST00000150556	processed_transcript		2	-1	90917669	379
ENSMUSG00000029670	protein_coding	Ing3	ENSMUST00000144534	retained_intron		6	1	21949649	2659
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000122895	protein_coding		16	1	94370781	3579
ENSMUSG00000097174	bidirectional_promoter_lncRNA	Gm4890	ENSMUST00000181030	bidirectional_promoter_lncRNA		8	1	79295123	3784
ENSMUSG00000066324	protein_coding	Impad1	ENSMUST00000084949	protein_coding	principal1	4	-1	4793355	6543
ENSMUSG00000097174	bidirectional_promoter_lncRNA	Gm4890	ENSMUST00000209627	bidirectional_promoter_lncRNA		8	1	79295368	333
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000151770	protein_coding		16	1	94370781	3630
ENSMUSG00000034639	protein_coding	Setmar	ENSMUST00000049246	protein_coding	principal1	6	1	108065045	1612
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000231569	protein_coding		16	1	94370792	6373
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000147046	protein_coding		16	1	94370796	1519
ENSMUSG00000083228	processed_pseudogene	Gm11779	ENSMUST00000118541	processed_pseudogene		4	-1	4978874	368
ENSMUSG00000029670	protein_coding	Ing3	ENSMUST00000136200	nonsense_mediated_decay		6	1	21949654	1847
ENSMUSG00000087099	lincRNA	Gm11782	ENSMUST00000131675	lincRNA		4	-1	5551223	2804
ENSMUSG00000104195	TEC	B230377A18Rik	ENSMUST00000192921	TEC		5	1	134176346	1364
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201205	protein_coding		18	1	69519479	2270
ENSMUSG00000054988	protein_coding	Agtr1b	ENSMUST00000068316	protein_coding	principal1	3	-1	20367177	2147
ENSMUSG00000104195	TEC	B230377A18Rik	ENSMUST00000192229	TEC		5	1	134176358	599
ENSMUSG00000034639	protein_coding	Setmar	ENSMUST00000138140	nonsense_mediated_decay		6	1	108065062	1748
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000149885	protein_coding		16	1	94370797	363
ENSMUSG00000029670	protein_coding	Ing3	ENSMUST00000115389	protein_coding		6	1	21949657	2546
ENSMUSG00000092470	protein_coding	Gm20518	ENSMUST00000150068	nonsense_mediated_decay	principal1	16	-1	17891671	3811
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000127667	protein_coding		16	1	94370797	332
ENSMUSG00000102398	TEC	Gm37580	ENSMUST00000192408	TEC		1	1	24100625	2800
ENSMUSG00000063235	protein_coding	Ptpmt1	ENSMUST00000077874	protein_coding	principal1	2	-1	90918050	1319
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000200966	protein_coding		18	1	69519718	731
ENSMUSG00000029670	protein_coding	Ing3	ENSMUST00000151473	protein_coding		6	1	21949670	889
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201410	protein_coding		18	1	69519766	1915
ENSMUSG00000097670	processed_pseudogene	Gm26607	ENSMUST00000180661	processed_pseudogene		1	1	24125275	867
ENSMUSG00000047989	protein_coding	Ino80c	ENSMUST00000153360	protein_coding	principal2	18	-1	24121953	2498
ENSMUSG00000005510	protein_coding	Ndufs3	ENSMUST00000140248	processed_transcript		2	-1	90898454	409
ENSMUSG00000029670	protein_coding	Ing3	ENSMUST00000152877	nonsense_mediated_decay		6	1	21949685	1277
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000119131	protein_coding		16	1	94370798	3781
ENSMUSG00000047989	protein_coding	Ino80c	ENSMUST00000141489	protein_coding		18	-1	24121953	2207
ENSMUSG00000029670	protein_coding	Ing3	ENSMUST00000149728	protein_coding		6	1	21950020	399
ENSMUSG00000054988	protein_coding	Agtr1b	ENSMUST00000163776	protein_coding	principal1	3	-1	20367124	1633
ENSMUSG00000044080	protein_coding	S100a1	ENSMUST00000060738	protein_coding	principal1	3	-1	90514392	677
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000151192	processed_transcript		16	1	94370798	410
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202937	protein_coding		18	1	69519776	2103
ENSMUSG00000029670	protein_coding	Ing3	ENSMUST00000141689	retained_intron		6	1	21952057	667
ENSMUSG00000047989	protein_coding	Ino80c	ENSMUST00000055012	protein_coding		18	-1	24121835	909
ENSMUSG00000110794	lincRNA	4930401A07Rik	ENSMUST00000216155	lincRNA		10	1	92401014	360
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000145883	protein_coding		16	1	94370823	599
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000200813	protein_coding		18	1	69519821	582
ENSMUSG00000101368	unprocessed_pseudogene	Gm28290	ENSMUST00000186505	unprocessed_pseudogene		Y	-1	54216395	614
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000232395	protein_coding	principal1	16	1	94380741	8007
ENSMUSG00000047989	protein_coding	Ino80c	ENSMUST00000125169	protein_coding	alternative1	18	-1	24114913	756
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000145312	processed_transcript		2	-1	84650540	5391
ENSMUSG00000048924	protein_coding	Ccdc125	ENSMUST00000170347	protein_coding	alternative2	13	1	100669717	1216
ENSMUSG00000110794	lincRNA	4930401A07Rik	ENSMUST00000214657	lincRNA		10	1	92401014	746
ENSMUSG00000099682	unprocessed_pseudogene	Gm28292	ENSMUST00000186593	unprocessed_pseudogene		Y	-1	54253315	697
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000232660	protein_coding	principal1	16	1	94382908	8298
ENSMUSG00000006262	protein_coding	Mob1b	ENSMUST00000155298	retained_intron		5	1	88720855	6258
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202350	protein_coding		18	1	69521160	809
ENSMUSG00000111604	processed_pseudogene	Gm18043	ENSMUST00000216741	processed_pseudogene		10	1	92484220	739
ENSMUSG00000044080	protein_coding	S100a1	ENSMUST00000107340	protein_coding		3	-1	90514278	577
ENSMUSG00000103573	processed_pseudogene	Gm18426	ENSMUST00000191874	processed_pseudogene		3	-1	20391985	973
ENSMUSG00000111759	processed_pseudogene	Gm4800	ENSMUST00000215776	processed_pseudogene		10	-1	92543670	1266
ENSMUSG00000106442	TEC	Gm42594	ENSMUST00000199511	TEC		3	1	20404665	246
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202477	protein_coding		18	1	69521298	1873
ENSMUSG00000111121	processed_pseudogene	Gm3523	ENSMUST00000215344	processed_pseudogene		10	1	92587061	280
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111691	protein_coding	principal2	2	-1	84650765	5380
ENSMUSG00000111470	lincRNA	Gm31822	ENSMUST00000216096	lincRNA		10	1	92644091	2572
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000200862	protein_coding		18	1	69521501	1462
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000126946	retained_intron		18	1	69521524	2822
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000125154	processed_transcript		18	1	69521538	332
ENSMUSG00000048924	protein_coding	Ccdc125	ENSMUST00000057325	protein_coding	principal3	13	1	100669773	2413
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202057	protein_coding		18	1	69521861	1941
ENSMUSG00000051238	protein_coding	Swsap1	ENSMUST00000053583	protein_coding	principal1	9	1	21955755	1838
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201627	protein_coding		18	1	69522001	881
ENSMUSG00000005950	protein_coding	P2rx5	ENSMUST00000006104	protein_coding	principal1	11	1	73160421	2395
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201747	retained_intron		18	1	69522181	665
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000209174	protein_coding		18	1	69522450	600
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000141151	processed_transcript		2	-1	84609677	823
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000150940	processed_transcript		2	-1	84609697	810
ENSMUSG00000005950	protein_coding	P2rx5	ENSMUST00000135202	protein_coding		11	1	73160585	1004
ENSMUSG00000045903	protein_coding	Npas4	ENSMUST00000237172	retained_intron		19	-1	4989971	3791
ENSMUSG00000005950	protein_coding	P2rx5	ENSMUST00000136894	protein_coding		11	1	73160585	1076
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000131926	processed_transcript		2	-1	84612578	676
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000231915	nonsense_mediated_decay		16	1	94383872	5833
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000126092	processed_transcript		2	-1	84638105	406
ENSMUSG00000090808	unprocessed_pseudogene	Gm1758	ENSMUST00000164528	unprocessed_pseudogene		16	1	14502100	600
ENSMUSG00000055866	protein_coding	Per2	ENSMUST00000069620	protein_coding	principal1	1	-1	91459324	5833
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000149317	processed_transcript		2	-1	84648537	467
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201045	processed_transcript		18	1	69563007	782
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000231850	nonsense_mediated_decay		16	1	94419446	741
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000136151	processed_transcript		18	1	69563335	448
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000141176	protein_coding		16	1	94425148	627
ENSMUSG00000055866	protein_coding	Per2	ENSMUST00000185298	processed_transcript		1	-1	91449865	231
ENSMUSG00000090236	protein_coding	Car15	ENSMUST00000118960	protein_coding	principal1	16	-1	17838364	1283
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111670	protein_coding		2	-1	84650740	5047
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000114978	protein_coding		18	1	69592988	2437
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000139607	retained_intron		16	1	94440093	4212
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201091	protein_coding		18	1	69593372	959
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000232368	nonsense_mediated_decay		16	1	94443266	1408
ENSMUSG00000004668	protein_coding	Abca13	ENSMUST00000042740	protein_coding	principal1	11	1	9191942	16011
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201037	protein_coding		18	1	69593413	765
ENSMUSG00000005510	protein_coding	Ndufs3	ENSMUST00000005647	protein_coding	principal1	2	-1	90904827	1046
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000141192	nonsense_mediated_decay		16	1	94451126	760
ENSMUSG00000090236	protein_coding	Car15	ENSMUST00000231865	retained_intron		16	-1	17836056	595
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000199845	retained_intron		5	1	3803184	4293
ENSMUSG00000034101	protein_coding	Ctnnd1	ENSMUST00000111697	protein_coding		2	-1	84650740	5294
ENSMUSG00000090236	protein_coding	Car15	ENSMUST00000232529	retained_intron		16	-1	17837393	789
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000154196	nonsense_mediated_decay		16	1	94457397	926
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000209116	nonsense_mediated_decay		18	1	69593419	721
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202751	nonsense_mediated_decay		18	1	69593419	923
ENSMUSG00000090236	protein_coding	Car15	ENSMUST00000232516	retained_intron		16	-1	17837574	520
ENSMUSG00000005510	protein_coding	Ndufs3	ENSMUST00000123426	processed_transcript		2	-1	90902686	690
ENSMUSG00000004668	protein_coding	Abca13	ENSMUST00000141233	processed_transcript		11	1	9191942	3956
ENSMUSG00000004668	protein_coding	Abca13	ENSMUST00000151522	protein_coding		11	1	9193451	489
ENSMUSG00000005510	protein_coding	Ndufs3	ENSMUST00000139400	processed_transcript		2	-1	90898938	550
ENSMUSG00000055771	processed_pseudogene	Gm7936	ENSMUST00000069529	processed_pseudogene		18	-1	30495373	370
ENSMUSG00000035021	protein_coding	Baz1a	ENSMUST00000173433	protein_coding	principal2	12	-1	54986507	5788
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000114977	protein_coding		18	1	69593426	3070
ENSMUSG00000040785	protein_coding	Ttc3	ENSMUST00000129536	retained_intron		16	1	94466522	766
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201892	retained_intron		18	1	69593427	4019
ENSMUSG00000005510	protein_coding	Ndufs3	ENSMUST00000152059	processed_transcript		2	-1	90904642	707
ENSMUSG00000020571	protein_coding	Pdia6	ENSMUST00000162936	retained_intron		12	1	17266545	1986
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201589	retained_intron		18	1	69593427	373
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201157	processed_transcript		18	1	69593444	780
ENSMUSG00000035021	protein_coding	Baz1a	ENSMUST00000173453	retained_intron		12	-1	54895154	526
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000200921	protein_coding		18	1	69593583	809
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201964	protein_coding		18	1	69594182	843
ENSMUSG00000006262	protein_coding	Mob1b	ENSMUST00000113229	protein_coding		5	1	88720855	8967
ENSMUSG00000038023	protein_coding	Atp6v0a2	ENSMUST00000200292	processed_transcript		5	1	124628576	357
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000145918	protein_coding		18	1	69599536	619
ENSMUSG00000045065	protein_coding	9930022D16Rik	ENSMUST00000055404	protein_coding	principal1	11	1	109413917	2706
ENSMUSG00000089665	protein_coding	Fcor	ENSMUST00000159364	protein_coding	principal1	8	-1	3672362	392
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000202474	protein_coding		18	1	69612444	1810
ENSMUSG00000005510	protein_coding	Ndufs3	ENSMUST00000144683	processed_transcript		2	-1	90904702	783
ENSMUSG00000035021	protein_coding	Baz1a	ENSMUST00000174225	nonsense_mediated_decay		12	-1	54930339	557
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000201081	retained_intron		18	1	69656667	3625
ENSMUSG00000035021	protein_coding	Baz1a	ENSMUST00000173176	nonsense_mediated_decay		12	-1	54944052	592
ENSMUSG00000035021	protein_coding	Baz1a	ENSMUST00000172875	protein_coding		12	-1	55014348	589
ENSMUSG00000028713	protein_coding	Cyp4b1	ENSMUST00000135569	nonsense_mediated_decay		4	-1	115640428	1497
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000146908	retained_intron		18	1	69679699	3693
ENSMUSG00000035021	protein_coding	Baz1a	ENSMUST00000173177	protein_coding		12	-1	54985936	418
ENSMUSG00000026162	protein_coding	Nhej1	ENSMUST00000152855	protein_coding	principal1	1	-1	75046639	1053
ENSMUSG00000026162	protein_coding	Nhej1	ENSMUST00000188033	processed_transcript		1	-1	75125200	65
ENSMUSG00000027394	protein_coding	Ttl	ENSMUST00000035812	protein_coding	principal1	2	1	129065942	4567
ENSMUSG00000035021	protein_coding	Baz1a	ENSMUST00000173529	protein_coding		12	-1	54999102	411
ENSMUSG00000114950	processed_pseudogene	Gm47747	ENSMUST00000224863	processed_pseudogene		14	1	6956945	681
ENSMUSG00000020078	protein_coding	Vps26a	ENSMUST00000092473	protein_coding		10	-1	62486598	2712
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000136019	retained_intron		18	1	69682380	1001
ENSMUSG00000027394	protein_coding	Ttl	ENSMUST00000144730	processed_transcript		2	1	129065985	1053
ENSMUSG00000006262	protein_coding	Mob1b	ENSMUST00000006424	protein_coding	principal1	5	1	88720871	2705
ENSMUSG00000027394	protein_coding	Ttl	ENSMUST00000144120	protein_coding		2	1	129076045	1238
ENSMUSG00000061979	protein_coding	Rcc1l	ENSMUST00000076228	protein_coding	principal1	5	-1	134176774	2321
ENSMUSG00000053477	protein_coding	Tcf4	ENSMUST00000078486	protein_coding	principal3	18	1	69345721	7147
ENSMUSG00000020078	protein_coding	Vps26a	ENSMUST00000219574	nonsense_mediated_decay		10	-1	62486732	2288
ENSMUSG00000109746	processed_pseudogene	Gm7499	ENSMUST00000210423	processed_pseudogene		8	-1	59093423	813
ENSMUSG00000003166	protein_coding	Dgcr2	ENSMUST00000135229	retained_intron		16	-1	17891654	5703
ENSMUSG00000035021	protein_coding	Baz1a	ENSMUST00000038926	protein_coding	alternative2	12	-1	54986336	6188
ENSMUSG00000020078	protein_coding	Vps26a	ENSMUST00000105447	protein_coding	principal1	10	-1	62486805	2597
ENSMUSG00000006262	protein_coding	Mob1b	ENSMUST00000125171	retained_intron		5	1	88720977	891
ENSMUSG00000061979	protein_coding	Rcc1l	ENSMUST00000126113	retained_intron		5	-1	134169375	772
ENSMUSG00000045903	protein_coding	Npas4	ENSMUST00000056129	protein_coding	principal1	19	-1	4990316	3622
ENSMUSG00000061979	protein_coding	Rcc1l	ENSMUST00000156574	retained_intron		5	-1	134168260	679
ENSMUSG00000107418	processed_pseudogene	Gm4782	ENSMUST00000168705	processed_pseudogene		6	1	50608637	2046
ENSMUSG00000095524	processed_pseudogene	Gm15682	ENSMUST00000121563	processed_pseudogene		5	-1	88739729	483
ENSMUSG00000108135	processed_pseudogene	Gm8035	ENSMUST00000204625	processed_pseudogene		6	-1	50618535	687
ENSMUSG00000020078	protein_coding	Vps26a	ENSMUST00000217868	protein_coding		10	-1	62486746	456
ENSMUSG00000041735	protein_coding	AAdacl4fm3	ENSMUST00000209924	processed_transcript		4	-1	144715305	789
ENSMUSG00000107821	processed_pseudogene	Gm8038	ENSMUST00000164674	processed_pseudogene		6	-1	50621884	2044
ENSMUSG00000045903	protein_coding	Npas4	ENSMUST00000237881	nonsense_mediated_decay		19	-1	4989904	2453
ENSMUSG00000108016	processed_pseudogene	Gm8039	ENSMUST00000204758	processed_pseudogene		6	-1	50626456	712
ENSMUSG00000006529	protein_coding	Itih1	ENSMUST00000006704	protein_coding	alternative2	14	-1	30943277	3077
ENSMUSG00000107740	processed_pseudogene	Gm18765	ENSMUST00000203166	processed_pseudogene		6	-1	50628339	660
ENSMUSG00000041735	protein_coding	AAdacl4fm3	ENSMUST00000036876	protein_coding	principal1	4	-1	144721404	1227
ENSMUSG00000113434	antisense	3200001D21Rik	ENSMUST00000221603	antisense		12	-1	88377323	2283
ENSMUSG00000006529	protein_coding	Itih1	ENSMUST00000163118	protein_coding	principal3	14	-1	30943289	3077
ENSMUSG00000103539	TEC	Gm37834	ENSMUST00000194517	TEC		3	1	31954764	3035
ENSMUSG00000058594	protein_coding	Fbh1	ENSMUST00000139292	processed_transcript		2	-1	11743651	358
ENSMUSG00000006529	protein_coding	Itih1	ENSMUST00000227938	retained_intron		14	-1	30943286	353
ENSMUSG00000103859	processed_pseudogene	Gm37603	ENSMUST00000192368	processed_pseudogene		3	1	72180737	219
ENSMUSG00000103078	processed_pseudogene	Gm37901	ENSMUST00000195107	processed_pseudogene		3	-1	72604348	514
ENSMUSG00000029831	protein_coding	Npvf	ENSMUST00000031853	protein_coding	principal1	6	-1	50654439	812
ENSMUSG00000035726	protein_coding	Supt16	ENSMUST00000046709	protein_coding	principal1	14	-1	52197416	4673
ENSMUSG00000035726	protein_coding	Supt16	ENSMUST00000227577	retained_intron		14	-1	52163130	548
ENSMUSG00000020571	protein_coding	Pdia6	ENSMUST00000057288	protein_coding	principal1	12	1	17266545	2175
ENSMUSG00000056144	protein_coding	Trim34a	ENSMUST00000060315	protein_coding	principal1	7	1	104244459	2590
ENSMUSG00000020571	protein_coding	Pdia6	ENSMUST00000161853	processed_transcript		12	1	17266608	436
ENSMUSG00000022280	protein_coding	Rnf19a	ENSMUST00000022890	protein_coding	principal1	15	-1	36283147	4277
ENSMUSG00000056144	protein_coding	Trim34a	ENSMUST00000106848	protein_coding	principal1	7	1	104244493	2043
ENSMUSG00000020571	protein_coding	Pdia6	ENSMUST00000159434	retained_intron		12	1	17273842	738
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000202576	protein_coding	alternative1	5	1	31240864	2221
ENSMUSG00000020571	protein_coding	Pdia6	ENSMUST00000163000	processed_transcript		12	1	17277241	491
ENSMUSG00000022280	protein_coding	Rnf19a	ENSMUST00000228358	protein_coding		15	-1	36283098	3452
ENSMUSG00000056144	protein_coding	Trim34a	ENSMUST00000106849	protein_coding	principal1	7	1	104244457	2578
ENSMUSG00000022280	protein_coding	Rnf19a	ENSMUST00000227735	retained_intron		15	-1	36283134	1136
ENSMUSG00000101911	processed_pseudogene	Gm28381	ENSMUST00000188403	processed_pseudogene		1	-1	91470098	193
ENSMUSG00000111737	antisense	Gm47248	ENSMUST00000217156	antisense		7	-1	104262174	609
ENSMUSG00000020571	protein_coding	Pdia6	ENSMUST00000239402	protein_coding		12	1	17266595	2125
ENSMUSG00000100151	lincRNA	Gm28382	ENSMUST00000187902	lincRNA		1	1	91483024	1669
ENSMUSG00000091400	protein_coding	Gm6356	ENSMUST00000166618	protein_coding	principal1	14	-1	6973818	1757
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000031034	protein_coding	principal3	5	1	31240864	2203
ENSMUSG00000037610	protein_coding	Kcnmb2	ENSMUST00000119310	protein_coding	principal1	3	1	31902507	2600
ENSMUSG00000037610	protein_coding	Kcnmb2	ENSMUST00000192429	protein_coding	principal1	3	1	31902674	2357
ENSMUSG00000114611	processed_pseudogene	Gm47749	ENSMUST00000225769	processed_pseudogene		14	1	6997191	592
ENSMUSG00000037610	protein_coding	Kcnmb2	ENSMUST00000191869	protein_coding		3	1	31902696	1552
ENSMUSG00000037610	protein_coding	Kcnmb2	ENSMUST00000119970	protein_coding	principal1	3	1	31902703	2919
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000135184	processed_transcript		16	-1	97462907	2967
ENSMUSG00000037610	protein_coding	Kcnmb2	ENSMUST00000194796	protein_coding		3	1	32156114	338
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000155233	processed_transcript		16	-1	97462905	2790
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000202842	protein_coding		5	1	31240877	580
ENSMUSG00000037610	protein_coding	Kcnmb2	ENSMUST00000178668	protein_coding	principal1	3	1	31902703	2917
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000200722	retained_intron		5	1	31240895	947
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000201259	protein_coding		5	1	31240903	471
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000202505	protein_coding		5	1	31240932	774
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000202875	retained_intron		5	1	31243428	835
ENSMUSG00000020604	protein_coding	Arsg	ENSMUST00000106697	protein_coding	principal1	11	1	109485606	3232
ENSMUSG00000039159	protein_coding	Ube2h	ENSMUST00000102993	protein_coding	principal1	6	-1	30304539	4657
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000202982	retained_intron		5	1	31247423	594
ENSMUSG00000020604	protein_coding	Arsg	ENSMUST00000106696	protein_coding		11	1	109543754	1508
ENSMUSG00000050043	protein_coding	Tmx2	ENSMUST00000111664	protein_coding		2	-1	84678118	1926
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000200857	retained_intron		5	1	31249355	1617
ENSMUSG00000039159	protein_coding	Ube2h	ENSMUST00000128141	processed_transcript		6	-1	30243803	620
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000201070	retained_intron		5	1	31249591	580
ENSMUSG00000028713	protein_coding	Cyp4b1	ENSMUST00000102707	protein_coding	principal1	4	-1	115647723	1892
ENSMUSG00000029148	protein_coding	Nrbp1	ENSMUST00000202801	retained_intron		5	1	31250345	881
ENSMUSG00000020604	protein_coding	Arsg	ENSMUST00000152252	processed_transcript		11	1	109473374	430
ENSMUSG00000020604	protein_coding	Arsg	ENSMUST00000136336	processed_transcript		11	1	109485023	733
ENSMUSG00000055424	antisense	Gm9970	ENSMUST00000238448	antisense		5	-1	31241232	767
ENSMUSG00000028713	protein_coding	Cyp4b1	ENSMUST00000145841	protein_coding		4	-1	115641899	1126
ENSMUSG00000055424	antisense	Gm9970	ENSMUST00000068997	antisense		5	-1	31241232	558
ENSMUSG00000039159	protein_coding	Ube2h	ENSMUST00000094543	protein_coding		6	-1	30304522	975
ENSMUSG00000020604	protein_coding	Arsg	ENSMUST00000020928	protein_coding	principal1	11	1	109473374	3273
ENSMUSG00000020464	protein_coding	Pnpt1	ENSMUST00000020756	protein_coding	principal1	11	1	29130748	2707
ENSMUSG00000028713	protein_coding	Cyp4b1	ENSMUST00000143237	retained_intron		4	-1	115635912	544
ENSMUSG00000039159	protein_coding	Ube2h	ENSMUST00000148744	processed_transcript		6	-1	30304528	803
ENSMUSG00000109784	TEC	Gm45493	ENSMUST00000209494	TEC		8	1	18862196	3948
ENSMUSG00000110530	antisense	Gm35934	ENSMUST00000213002	antisense		8	-1	18902316	2494
ENSMUSG00000117526	processed_pseudogene	Gm41780	ENSMUST00000235078	processed_pseudogene		18	-1	30608890	354
ENSMUSG00000020464	protein_coding	Pnpt1	ENSMUST00000131527	processed_transcript		11	1	29138187	587
ENSMUSG00000109277	lincRNA	Gm39121	ENSMUST00000208847	lincRNA		8	1	3672430	525
ENSMUSG00000109569	unprocessed_pseudogene	Gm44554	ENSMUST00000208738	unprocessed_pseudogene		7	-1	21813622	147
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000053811	protein_coding	principal1	12	1	85110833	2764
ENSMUSG00000095064	protein_coding	Vmn1r135	ENSMUST00000170931	protein_coding	principal1	7	1	21832351	924
ENSMUSG00000095191	protein_coding	Vmn1r249	ENSMUST00000105195	protein_coding	principal1	7	-1	21844267	924
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000221357	nonsense_mediated_decay		12	1	85110837	2259
ENSMUSG00000020658	protein_coding	Efr3b	ENSMUST00000111178	protein_coding	principal1	12	-1	4038915	6547
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000223415	retained_intron		12	1	85110858	3220
ENSMUSG00000020658	protein_coding	Efr3b	ENSMUST00000218166	protein_coding		12	-1	3992920	5861
ENSMUSG00000050043	protein_coding	Tmx2	ENSMUST00000111665	protein_coding	principal1	2	-1	84678828	2282
ENSMUSG00000020063	protein_coding	Sirt1	ENSMUST00000120239	protein_coding	principal3	10	-1	63381704	4430
ENSMUSG00000002083	protein_coding	Bbc3	ENSMUST00000209688	protein_coding		7	1	16308393	405
ENSMUSG00000020658	protein_coding	Efr3b	ENSMUST00000219331	nonsense_mediated_decay		12	-1	3975464	742
ENSMUSG00000090840	protein_coding	1700092M07Rik	ENSMUST00000163172	protein_coding	principal1	19	1	8740718	380
ENSMUSG00000020658	protein_coding	Efr3b	ENSMUST00000219797	retained_intron		12	-1	3981848	437
ENSMUSG00000020063	protein_coding	Sirt1	ENSMUST00000146028	nonsense_mediated_decay		10	-1	63336992	3458
ENSMUSG00000020658	protein_coding	Efr3b	ENSMUST00000217677	processed_transcript		12	-1	3982452	427
ENSMUSG00000050043	protein_coding	Tmx2	ENSMUST00000123772	processed_transcript		2	-1	84678049	660
ENSMUSG00000090840	protein_coding	1700092M07Rik	ENSMUST00000187020	retained_intron		19	1	8740762	463
ENSMUSG00000020658	protein_coding	Efr3b	ENSMUST00000218545	retained_intron		12	-1	4038791	3973
ENSMUSG00000092506	unprocessed_pseudogene	Vmn1r-ps77	ENSMUST00000174184	unprocessed_pseudogene		7	-1	21876280	921
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000149350	protein_coding		5	1	32863701	585
ENSMUSG00000109092	processed_pseudogene	Gm18057	ENSMUST00000208220	processed_pseudogene		7	1	21907345	503
ENSMUSG00000112517	antisense	Gm48001	ENSMUST00000220181	antisense		12	1	3984665	411
ENSMUSG00000002083	protein_coding	Bbc3	ENSMUST00000002152	protein_coding	principal1	7	1	16309616	1814
ENSMUSG00000102328	unprocessed_pseudogene	Gm37793	ENSMUST00000195548	unprocessed_pseudogene		Y	1	25341710	695
ENSMUSG00000108853	processed_pseudogene	Gm18464	ENSMUST00000207803	processed_pseudogene		7	1	21919645	420
ENSMUSG00000020063	protein_coding	Sirt1	ENSMUST00000105442	protein_coding	alternative2	10	-1	63339035	3740
ENSMUSG00000050043	protein_coding	Tmx2	ENSMUST00000138529	processed_transcript		2	-1	84678043	749
ENSMUSG00000026205	protein_coding	Slc23a3	ENSMUST00000027405	protein_coding	principal1	1	-1	75133890	2059
ENSMUSG00000050043	protein_coding	Tmx2	ENSMUST00000152149	protein_coding		2	-1	84679140	424
ENSMUSG00000002083	protein_coding	Bbc3	ENSMUST00000136781	protein_coding		7	1	16310455	485
ENSMUSG00000020063	protein_coding	Sirt1	ENSMUST00000148516	retained_intron		10	-1	63325626	842
ENSMUSG00000038780	protein_coding	Smurf1	ENSMUST00000110677	protein_coding	alternative1	5	-1	144965839	5420
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000000087	protein_coding	principal3	4	1	120405307	3353
ENSMUSG00000095976	protein_coding	Gm5891	ENSMUST00000186212	protein_coding	principal1	7	-1	21921291	2495
ENSMUSG00000050043	protein_coding	Tmx2	ENSMUST00000053664	protein_coding	principal1	2	-1	84678056	1977
ENSMUSG00000002083	protein_coding	Bbc3	ENSMUST00000147267	retained_intron		7	1	16313517	881
ENSMUSG00000020063	protein_coding	Sirt1	ENSMUST00000131371	retained_intron		10	-1	63336992	763
ENSMUSG00000095976	protein_coding	Gm5891	ENSMUST00000179493	protein_coding	principal1	7	-1	21910748	942
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000221288	processed_transcript		12	1	85110858	825
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000106301	protein_coding	alternative2	4	1	120447147	2584
ENSMUSG00000108888	antisense	Gm45231	ENSMUST00000208629	antisense		8	-1	3676954	1064
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000221842	processed_transcript		12	1	85110893	632
ENSMUSG00000026205	protein_coding	Slc23a3	ENSMUST00000188080	retained_intron		1	-1	75133546	795
ENSMUSG00000020610	protein_coding	Amz2	ENSMUST00000020929	protein_coding		11	1	109425976	1811
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000223332	nonsense_mediated_decay		12	1	85110893	770
ENSMUSG00000020063	protein_coding	Sirt1	ENSMUST00000020257	protein_coding	principal3	10	-1	63339032	3905
ENSMUSG00000026966	protein_coding	Ssna1	ENSMUST00000133697	processed_transcript		2	-1	25272410	845
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000222998	retained_intron		12	1	85118060	550
ENSMUSG00000020063	protein_coding	Sirt1	ENSMUST00000177694	protein_coding		10	-1	63339032	3353
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000220559	retained_intron		12	1	85123794	600
ENSMUSG00000020610	protein_coding	Amz2	ENSMUST00000125108	retained_intron		11	1	109425982	1846
ENSMUSG00000085372	antisense	Gm16145	ENSMUST00000128807	antisense		10	1	63353853	583
ENSMUSG00000040236	protein_coding	Trappc5	ENSMUST00000044857	protein_coding	principal1	8	1	3676299	2546
ENSMUSG00000038780	protein_coding	Smurf1	ENSMUST00000085684	protein_coding	principal4	5	-1	144965847	5343
ENSMUSG00000020610	protein_coding	Amz2	ENSMUST00000103061	protein_coding	principal1	11	1	109426226	1832
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000113768	polymorphic_pseudogene		16	-1	97462906	2695
ENSMUSG00000058420	protein_coding	Syt17	ENSMUST00000081574	protein_coding	principal1	7	-1	118443560	2764
ENSMUSG00000020610	protein_coding	Amz2	ENSMUST00000141739	processed_transcript		11	1	109432716	462
ENSMUSG00000040236	protein_coding	Trappc5	ENSMUST00000207787	protein_coding	principal1	8	1	3676510	4411
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000223413	processed_transcript		12	1	85125861	2152
ENSMUSG00000110401	processed_pseudogene	Gm5740	ENSMUST00000211003	processed_pseudogene		8	1	59219317	1857
ENSMUSG00000004961	protein_coding	Syt5	ENSMUST00000065957	protein_coding	principal1	7	-1	4546567	1750
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000220633	retained_intron		12	1	85127738	746
ENSMUSG00000020610	protein_coding	Amz2	ENSMUST00000155036	retained_intron		11	1	109433779	426
ENSMUSG00000095930	protein_coding	Nim1k	ENSMUST00000178142	protein_coding	principal1	13	-1	119755882	4103
ENSMUSG00000020610	protein_coding	Amz2	ENSMUST00000131181	processed_transcript		11	1	109433992	751
ENSMUSG00000058420	protein_coding	Syt17	ENSMUST00000203465	protein_coding		7	-1	118442514	2548
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000223438	retained_intron		12	1	85128082	732
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000238205	processed_transcript		16	-1	97460772	1418
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000223409	retained_intron		12	1	85130273	345
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000238262	processed_transcript		16	-1	97460772	925
ENSMUSG00000004961	protein_coding	Syt5	ENSMUST00000206023	protein_coding		7	-1	4547541	397
ENSMUSG00000004789	protein_coding	Dlst	ENSMUST00000222472	retained_intron		12	1	85130441	1235
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000231995	retained_intron		16	-1	97452877	352
ENSMUSG00000038780	protein_coding	Smurf1	ENSMUST00000100461	protein_coding	alternative1	5	-1	144965847	2725
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000136801	processed_transcript		4	1	120517626	1536
ENSMUSG00000042650	protein_coding	Alkbh5	ENSMUST00000134770	processed_transcript		11	1	60536381	624
ENSMUSG00000020610	protein_coding	Amz2	ENSMUST00000154875	processed_transcript		11	1	109440156	1152
ENSMUSG00000004961	protein_coding	Syt5	ENSMUST00000206933	protein_coding		7	-1	4546973	444
ENSMUSG00000095930	protein_coding	Nim1k	ENSMUST00000178973	retained_intron		13	-1	119738394	5307
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000134375	processed_transcript		4	1	120405281	1132
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000231461	processed_transcript		16	-1	97462889	755
ENSMUSG00000103487	unprocessed_pseudogene	Gm30858	ENSMUST00000195516	unprocessed_pseudogene		Y	1	25378537	615
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000144862	processed_transcript		4	1	120517679	595
ENSMUSG00000038780	protein_coding	Smurf1	ENSMUST00000198621	protein_coding		5	-1	144897994	927
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000231455	retained_intron		16	-1	97460858	409
ENSMUSG00000031467	protein_coding	Agpat5	ENSMUST00000149565	protein_coding	principal2	8	1	18846277	10779
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000142883	processed_transcript		16	-1	97462905	481
ENSMUSG00000103639	unprocessed_pseudogene	Gm21791	ENSMUST00000191631	unprocessed_pseudogene		Y	1	25408061	696
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000144555	processed_transcript		4	1	120503879	3544
ENSMUSG00000026966	protein_coding	Ssna1	ENSMUST00000028342	protein_coding	principal1	2	-1	25272416	862
ENSMUSG00000104085	unprocessed_pseudogene	Gm21427	ENSMUST00000193270	unprocessed_pseudogene		Y	1	25482701	696
ENSMUSG00000020610	protein_coding	Amz2	ENSMUST00000238825	protein_coding		11	1	109426220	2997
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000232193	protein_coding		16	-1	97457492	908
ENSMUSG00000031467	protein_coding	Agpat5	ENSMUST00000033847	protein_coding	alternative2	8	1	18846279	2841
ENSMUSG00000106933	TEC	Gm43621	ENSMUST00000202733	TEC		2	-1	36250730	2022
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000153099	processed_transcript		4	1	120405381	1776
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000132116	protein_coding		4	1	120405428	623
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000151345	processed_transcript		4	1	120405366	352
ENSMUSG00000058420	protein_coding	Syt17	ENSMUST00000203796	protein_coding		7	-1	118448219	2957
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000122860	protein_coding		4	1	120505405	530
ENSMUSG00000020610	protein_coding	Amz2	ENSMUST00000092500	protein_coding		11	1	109425946	2816
ENSMUSG00000102576	lincRNA	Gm37875	ENSMUST00000192101	lincRNA		Y	-1	25593655	1498
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000133290	processed_transcript		4	1	120527829	557
ENSMUSG00000058420	protein_coding	Syt17	ENSMUST00000203485	protein_coding		7	-1	118448222	1932
ENSMUSG00000085326	antisense	Gm15642	ENSMUST00000148057	antisense		11	-1	109438145	311
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000023655	protein_coding	principal1	16	-1	97462906	3385
ENSMUSG00000058420	protein_coding	Syt17	ENSMUST00000207034	protein_coding		7	-1	118443289	362
ENSMUSG00000058420	protein_coding	Syt17	ENSMUST00000207650	retained_intron		7	-1	118448056	1794
ENSMUSG00000086284	antisense	Frmpd1os	ENSMUST00000134640	antisense		4	-1	45243990	415
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000133169	processed_transcript		4	1	120529155	443
ENSMUSG00000026966	protein_coding	Ssna1	ENSMUST00000141470	processed_transcript		2	-1	25272438	1006
ENSMUSG00000102576	lincRNA	Gm37875	ENSMUST00000194818	lincRNA		Y	-1	25593202	621
ENSMUSG00000102576	lincRNA	Gm37875	ENSMUST00000194353	lincRNA		Y	-1	25593202	437
ENSMUSG00000000386	polymorphic_pseudogene	Mx1	ENSMUST00000232282	protein_coding		16	-1	97457492	1401
ENSMUSG00000026966	protein_coding	Ssna1	ENSMUST00000127176	processed_transcript		2	-1	25272404	530
ENSMUSG00000103372	unprocessed_pseudogene	Gm37237	ENSMUST00000192893	unprocessed_pseudogene		Y	1	25630403	315
ENSMUSG00000093985	protein_coding	Gm10406	ENSMUST00000100895	protein_coding	principal1	14	-1	7022599	1813
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000162366	protein_coding	alternative2	5	-1	66618758	6540
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000106298	protein_coding	principal3	4	1	120462080	1995
ENSMUSG00000102354	unprocessed_pseudogene	Gm38350	ENSMUST00000194789	unprocessed_pseudogene		Y	1	25666954	696
ENSMUSG00000113391	TEC	Gm48327	ENSMUST00000221553	TEC		13	-1	8798402	1101
ENSMUSG00000000085	protein_coding	Scmh1	ENSMUST00000064991	protein_coding	alternative2	4	1	120453243	2548
ENSMUSG00000093985	protein_coding	Gm10406	ENSMUST00000170738	protein_coding	principal1	14	-1	7027449	1955
ENSMUSG00000102906	unprocessed_pseudogene	Gm20858	ENSMUST00000195459	unprocessed_pseudogene		Y	-1	25752495	657
ENSMUSG00000114383	processed_pseudogene	Gm3963	ENSMUST00000224040	processed_pseudogene		13	-1	78287084	448
ENSMUSG00000078504	protein_coding	Aadacl4fm5	ENSMUST00000105746	protein_coding	principal1	4	-1	144786583	1432
ENSMUSG00000081973	processed_pseudogene	Gm13600	ENSMUST00000117949	processed_pseudogene		2	1	66863262	744
ENSMUSG00000042650	protein_coding	Alkbh5	ENSMUST00000044250	protein_coding	principal1	11	1	60537978	5730
ENSMUSG00000103643	processed_pseudogene	Gm37770	ENSMUST00000192855	processed_pseudogene		3	1	32260333	772
ENSMUSG00000110381	lincRNA	Gm34370	ENSMUST00000209385	lincRNA		8	1	59419306	1410
ENSMUSG00000083998	processed_pseudogene	Prdx2-ps2	ENSMUST00000117259	processed_pseudogene		4	1	144791837	594
ENSMUSG00000109003	lincRNA	Gm36011	ENSMUST00000208671	lincRNA		7	-1	71116539	2719
ENSMUSG00000109161	lincRNA	Gm39033	ENSMUST00000209158	lincRNA		7	1	71097047	1021
ENSMUSG00000110406	lincRNA	4930470O06Rik	ENSMUST00000209438	lincRNA		8	1	59825649	662
ENSMUSG00000109966	lincRNA	Gm34623	ENSMUST00000210900	lincRNA		8	1	60195802	977
ENSMUSG00000109167	TEC	Gm44652	ENSMUST00000208648	TEC		7	1	118480495	2854
ENSMUSG00000096745	processed_pseudogene	Gm12622	ENSMUST00000177975	processed_pseudogene		11	-1	60561305	382
ENSMUSG00000019880	protein_coding	Rspo3	ENSMUST00000215256	protein_coding		10	-1	29504730	877
ENSMUSG00000021044	protein_coding	Adck1	ENSMUST00000101165	protein_coding	principal1	12	1	88360554	2158
ENSMUSG00000084273	unprocessed_pseudogene	Gm12628	ENSMUST00000122193	unprocessed_pseudogene		11	-1	60572210	382
ENSMUSG00000042312	protein_coding	S100a13	ENSMUST00000048138	protein_coding	principal1	3	1	90514435	715
ENSMUSG00000114632	lincRNA	Gm48399	ENSMUST00000225777	lincRNA		13	1	78374179	413
ENSMUSG00000021044	protein_coding	Adck1	ENSMUST00000222695	protein_coding	principal1	12	1	88360648	2253
ENSMUSG00000095115	protein_coding	Itpripl2	ENSMUST00000178344	protein_coding	principal1	7	-1	118491975	6865
ENSMUSG00000021044	protein_coding	Adck1	ENSMUST00000221630	retained_intron		12	1	88360815	3214
ENSMUSG00000041920	protein_coding	Slc16a6	ENSMUST00000168740	protein_coding		11	-1	109472688	548
ENSMUSG00000098003	processed_pseudogene	Gm6317	ENSMUST00000183159	processed_pseudogene		13	-1	78379128	1000
ENSMUSG00000064317	processed_pseudogene	Gm10146	ENSMUST00000072739	processed_pseudogene		10	1	78393320	309
ENSMUSG00000021044	protein_coding	Adck1	ENSMUST00000166940	protein_coding	principal1	12	1	88360889	2199
ENSMUSG00000100664	lincRNA	6030442E23Rik	ENSMUST00000186618	lincRNA		7	1	71217049	642
ENSMUSG00000038023	protein_coding	Atp6v0a2	ENSMUST00000037865	protein_coding	principal1	5	1	124629052	5345
ENSMUSG00000041920	protein_coding	Slc16a6	ENSMUST00000032206	protein_coding		11	-1	109466359	431
ENSMUSG00000021044	protein_coding	Adck1	ENSMUST00000223538	processed_transcript		12	1	88420296	1869
ENSMUSG00000019880	protein_coding	Rspo3	ENSMUST00000092623	protein_coding	principal1	10	-1	29535867	3085
ENSMUSG00000113087	antisense	4930473H19Rik	ENSMUST00000222124	antisense		12	-1	88442219	1000
ENSMUSG00000110831	antisense	Gm48159	ENSMUST00000215560	antisense		10	1	29534717	1113
ENSMUSG00000113087	antisense	4930473H19Rik	ENSMUST00000221624	antisense		12	-1	88442254	402
ENSMUSG00000042306	protein_coding	S100a14	ENSMUST00000199538	protein_coding	principal1	3	1	90526856	483
ENSMUSG00000111046	processed_pseudogene	Gm46197	ENSMUST00000217530	processed_pseudogene		10	-1	29614576	416
ENSMUSG00000110986	TEC	Gm20276	ENSMUST00000216122	TEC		10	-1	29493421	2648
ENSMUSG00000109405	unprocessed_pseudogene	Gm16443	ENSMUST00000207909	unprocessed_pseudogene		7	1	21936134	2184
ENSMUSG00000095962	protein_coding	Vmn1r137	ENSMUST00000177884	protein_coding	principal1	7	1	21994587	924
ENSMUSG00000075395	protein_coding	A630010A05Rik	ENSMUST00000129643	protein_coding	principal1	16	1	14562317	3052
ENSMUSG00000095287	unprocessed_pseudogene	Vmn1r-ps78	ENSMUST00000178185	unprocessed_pseudogene		7	-1	22007007	924
ENSMUSG00000075395	protein_coding	A630010A05Rik	ENSMUST00000147024	protein_coding		16	1	14580221	1115
ENSMUSG00000075395	protein_coding	A630010A05Rik	ENSMUST00000100165	protein_coding		16	1	14589209	684
ENSMUSG00000082218	processed_pseudogene	Gm13602	ENSMUST00000122405	processed_pseudogene		2	1	66942558	493
ENSMUSG00000095163	protein_coding	Vmn1r138	ENSMUST00000179206	protein_coding	principal1	7	-1	22028897	921
ENSMUSG00000003166	protein_coding	Dgcr2	ENSMUST00000117945	protein_coding	alternative1	16	-1	17891660	4003
ENSMUSG00000110677	unitary_pseudogene	Gm45777	ENSMUST00000213009	unitary_pseudogene		12	1	103368772	301
ENSMUSG00000042306	protein_coding	S100a14	ENSMUST00000164481	protein_coding		3	1	90526867	915
ENSMUSG00000058594	protein_coding	Fbh1	ENSMUST00000071564	protein_coding	principal1	2	-1	11777582	3567
ENSMUSG00000038023	protein_coding	Atp6v0a2	ENSMUST00000198382	nonsense_mediated_decay		5	1	124629065	3526
ENSMUSG00000086725	processed_transcript	A630052C17Rik	ENSMUST00000129876	processed_transcript		11	-1	29173558	2203
ENSMUSG00000042306	protein_coding	S100a14	ENSMUST00000167598	protein_coding	principal1	3	1	90526870	1059
ENSMUSG00000058594	protein_coding	Fbh1	ENSMUST00000155604	retained_intron		2	-1	11749229	1064
ENSMUSG00000042306	protein_coding	S100a14	ENSMUST00000200565	retained_intron		3	1	90526872	1683
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000155037	protein_coding		6	1	11907809	478
ENSMUSG00000038023	protein_coding	Atp6v0a2	ENSMUST00000197931	retained_intron		5	1	124629169	663
ENSMUSG00000003166	protein_coding	Dgcr2	ENSMUST00000012152	protein_coding	principal3	16	-1	17891693	4045
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000203459	nonsense_mediated_decay		6	1	11907884	483
ENSMUSG00000029313	protein_coding	Aff1	ENSMUST00000126335	retained_intron		5	1	103692374	1613
ENSMUSG00000100594	lincRNA	2810414N06Rik	ENSMUST00000186444	lincRNA		1	-1	151755018	1381
ENSMUSG00000027663	protein_coding	Zmat3	ENSMUST00000029199	protein_coding	principal1	3	-1	32365678	7797
ENSMUSG00000041920	protein_coding	Slc16a6	ENSMUST00000070152	protein_coding	principal3	11	-1	109473598	4219
ENSMUSG00000003166	protein_coding	Dgcr2	ENSMUST00000066127	protein_coding		16	-1	17891657	3790
ENSMUSG00000055629	protein_coding	B4galnt4	ENSMUST00000048002	protein_coding	principal1	7	1	141061104	3556
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000160870	protein_coding	alternative1	5	-1	66618681	6526
ENSMUSG00000038023	protein_coding	Atp6v0a2	ENSMUST00000199526	processed_transcript		5	1	124714142	126
ENSMUSG00000027663	protein_coding	Zmat3	ENSMUST00000139660	protein_coding		3	-1	32365460	440
ENSMUSG00000003166	protein_coding	Dgcr2	ENSMUST00000117082	protein_coding	alternative1	16	-1	17891593	2987
ENSMUSG00000038023	protein_coding	Atp6v0a2	ENSMUST00000197087	retained_intron		5	1	124715705	3245
ENSMUSG00000058594	protein_coding	Fbh1	ENSMUST00000123717	retained_intron		2	-1	11777507	4118
ENSMUSG00000027663	protein_coding	Zmat3	ENSMUST00000195055	retained_intron		3	-1	32366014	3813
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000159512	protein_coding	alternative2	5	-1	66618784	6632
ENSMUSG00000058594	protein_coding	Fbh1	ENSMUST00000131893	protein_coding		2	-1	11757556	891
ENSMUSG00000047250	protein_coding	Ptgs1	ENSMUST00000062069	protein_coding	principal1	2	1	36230426	2867
ENSMUSG00000058594	protein_coding	Fbh1	ENSMUST00000136633	retained_intron		2	-1	11751766	374
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000159786	protein_coding	alternative2	5	-1	66618663	6333
ENSMUSG00000027663	protein_coding	Zmat3	ENSMUST00000168566	protein_coding	principal1	3	-1	32365620	7672
ENSMUSG00000038023	protein_coding	Atp6v0a2	ENSMUST00000197161	nonsense_mediated_decay		5	1	124718196	660
ENSMUSG00000055629	protein_coding	B4galnt4	ENSMUST00000210203	retained_intron		7	1	141061365	827
ENSMUSG00000058594	protein_coding	Fbh1	ENSMUST00000123723	retained_intron		2	-1	11758473	820
ENSMUSG00000041920	protein_coding	Slc16a6	ENSMUST00000070872	protein_coding	alternative2	11	-1	109473294	2354
ENSMUSG00000058594	protein_coding	Fbh1	ENSMUST00000192171	processed_transcript		2	-1	11777550	476
ENSMUSG00000003166	protein_coding	Dgcr2	ENSMUST00000155943	protein_coding		16	-1	17894099	1996
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000118698	protein_coding		5	1	32863706	720
ENSMUSG00000106082	antisense	4930404A12Rik	ENSMUST00000199971	antisense		5	-1	124725079	557
ENSMUSG00000041920	protein_coding	Slc16a6	ENSMUST00000129901	processed_transcript		11	-1	109473199	367
ENSMUSG00000003166	protein_coding	Dgcr2	ENSMUST00000231306	retained_intron		16	-1	17845177	778
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000150130	protein_coding		5	1	32863713	346
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000187584	protein_coding	alternative2	1	-1	74091351	9916
ENSMUSG00000106082	antisense	4930404A12Rik	ENSMUST00000199356	antisense		5	-1	124725079	726
ENSMUSG00000003166	protein_coding	Dgcr2	ENSMUST00000155611	retained_intron		16	-1	17891649	1468
ENSMUSG00000055629	protein_coding	B4galnt4	ENSMUST00000209546	retained_intron		7	1	141064494	3076
ENSMUSG00000104414	lincRNA	Gm37799	ENSMUST00000194018	lincRNA		1	1	136541605	547
ENSMUSG00000055629	protein_coding	B4galnt4	ENSMUST00000211455	retained_intron		7	1	141070275	485
ENSMUSG00000003166	protein_coding	Dgcr2	ENSMUST00000231750	processed_transcript		16	-1	17898562	373
ENSMUSG00000047250	protein_coding	Ptgs1	ENSMUST00000144319	processed_transcript		2	1	36230556	573
ENSMUSG00000003166	protein_coding	Dgcr2	ENSMUST00000126919	processed_transcript		16	-1	17894145	616
ENSMUSG00000055629	protein_coding	B4galnt4	ENSMUST00000210517	protein_coding		7	1	141070602	476
ENSMUSG00000058594	protein_coding	Fbh1	ENSMUST00000126543	processed_transcript		2	-1	11777548	898
ENSMUSG00000047250	protein_coding	Ptgs1	ENSMUST00000149930	processed_transcript		2	1	36236249	2741
ENSMUSG00000047250	protein_coding	Ptgs1	ENSMUST00000151351	retained_intron		2	1	36240713	663
ENSMUSG00000058594	protein_coding	Fbh1	ENSMUST00000151402	processed_transcript		2	-1	11777507	503
ENSMUSG00000041566	protein_coding	Tssk1	ENSMUST00000046937	protein_coding	principal1	16	1	17894223	3700
ENSMUSG00000047250	protein_coding	Ptgs1	ENSMUST00000133777	retained_intron		2	1	36242475	697
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000191104	protein_coding	principal3	1	-1	74124449	9904
ENSMUSG00000117535	processed_pseudogene	Gm50067	ENSMUST00000234170	processed_pseudogene		18	1	11624915	593
ENSMUSG00000034075	protein_coding	Zdhhc5	ENSMUST00000035840	protein_coding	principal1	2	-1	84715180	4706
ENSMUSG00000113754	processed_pseudogene	Gm47401	ENSMUST00000223507	processed_pseudogene		13	1	9820511	223
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000201776	retained_intron		5	-1	66492172	4054
ENSMUSG00000035615	protein_coding	Frmpd1	ENSMUST00000107804	protein_coding	principal1	4	1	45203925	5241
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000160775	processed_transcript		5	-1	66337682	1638
ENSMUSG00000035615	protein_coding	Frmpd1	ENSMUST00000134280	protein_coding		4	1	45184875	671
ENSMUSG00000034075	protein_coding	Zdhhc5	ENSMUST00000138171	processed_transcript		2	-1	84714686	567
ENSMUSG00000100227	lincRNA	Gm28291	ENSMUST00000186921	lincRNA		Y	1	54290514	1499
ENSMUSG00000034075	protein_coding	Zdhhc5	ENSMUST00000125690	processed_transcript		2	-1	84715036	395
ENSMUSG00000035615	protein_coding	Frmpd1	ENSMUST00000044773	protein_coding	principal1	4	1	45184906	4812
ENSMUSG00000100227	lincRNA	Gm28291	ENSMUST00000189226	lincRNA		Y	1	54290967	434
ENSMUSG00000100227	lincRNA	Gm28291	ENSMUST00000185456	lincRNA		Y	1	54290967	622
ENSMUSG00000118364	TEC	AC124502.1	ENSMUST00000236669	TEC		19	-1	4993113	1757
ENSMUSG00000117723	processed_pseudogene	Gm50382	ENSMUST00000235939	processed_pseudogene		19	1	5009385	415
ENSMUSG00000029386	protein_coding	Tctn2	ENSMUST00000140953	retained_intron		5	1	124598749	637
ENSMUSG00000101645	protein_coding	Gm28635	ENSMUST00000189772	protein_coding	principal1	2	-1	84678041	4734
ENSMUSG00000006235	protein_coding	Epor	ENSMUST00000006397	protein_coding	principal1	9	-1	21963506	1761
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000187691	protein_coding		1	-1	73928513	2813
ENSMUSG00000118628	unprocessed_pseudogene	AC015535.1	ENSMUST00000239370	unprocessed_pseudogene		5	-1	120932173	503
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000185702	protein_coding		1	-1	73995372	5595
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000185331	protein_coding		1	-1	73995372	5529
ENSMUSG00000097378	lincRNA	B230208H11Rik	ENSMUST00000181073	lincRNA		10	-1	12923090	1050
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000239451	protein_coding	alternative2	1	-1	74098676	5894
ENSMUSG00000006235	protein_coding	Epor	ENSMUST00000213181	protein_coding		9	-1	21962564	659
ENSMUSG00000097378	lincRNA	B230208H11Rik	ENSMUST00000180529	lincRNA		10	-1	12923090	1112
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000212888	protein_coding	alternative2	1	-1	74124447	5643
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000162349	protein_coding	principal3	5	-1	66618671	3362
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000189228	protein_coding		1	-1	73941014	446
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000160063	nonsense_mediated_decay		5	-1	66492171	2782
ENSMUSG00000099456	lincRNA	Gm28293	ENSMUST00000190417	lincRNA		Y	1	54331574	1498
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000161771	processed_transcript		5	-1	66337483	599
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000191527	retained_intron		1	-1	73928217	659
ENSMUSG00000030101	protein_coding	Sumf1	ENSMUST00000032191	protein_coding	principal2	6	-1	108185582	2593
ENSMUSG00000030494	protein_coding	Rhpn2	ENSMUST00000032705	protein_coding	principal1	7	1	35334170	3508
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000162401	retained_intron		5	-1	66618670	1919
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000185264	processed_transcript		1	-1	73930811	601
ENSMUSG00000099456	lincRNA	Gm28293	ENSMUST00000187503	lincRNA		Y	1	54332027	621
ENSMUSG00000099456	lincRNA	Gm28293	ENSMUST00000191496	lincRNA		Y	1	54332027	437
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000160185	retained_intron		5	-1	66618683	1935
ENSMUSG00000031901	protein_coding	Dus2	ENSMUST00000142898	protein_coding		8	1	105991337	422
ENSMUSG00000030101	protein_coding	Sumf1	ENSMUST00000166197	processed_transcript		6	-1	108127063	417
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000162382	protein_coding		5	-1	66618640	600
ENSMUSG00000030101	protein_coding	Sumf1	ENSMUST00000167338	protein_coding	alternative2	6	-1	108185556	1044
ENSMUSG00000030494	protein_coding	Rhpn2	ENSMUST00000155140	retained_intron		7	1	35379282	689
ENSMUSG00000030101	protein_coding	Sumf1	ENSMUST00000172188	protein_coding		6	-1	108185556	723
ENSMUSG00000030494	protein_coding	Rhpn2	ENSMUST00000187997	retained_intron		7	1	35382565	2646
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000107110	protein_coding		4	-1	91372034	3671
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000161879	protein_coding		5	-1	66514830	398
ENSMUSG00000099594	unprocessed_pseudogene	Gm21740	ENSMUST00000190382	unprocessed_pseudogene		Y	-1	54415518	696
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000160103	protein_coding		5	-1	66618671	548
ENSMUSG00000030101	protein_coding	Sumf1	ENSMUST00000169446	protein_coding		6	-1	108144695	582
ENSMUSG00000030101	protein_coding	Sumf1	ENSMUST00000171697	retained_intron		6	-1	108152286	452
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000185529	processed_transcript		1	-1	73930505	528
ENSMUSG00000030494	protein_coding	Rhpn2	ENSMUST00000085556	protein_coding	principal1	7	1	35334330	3046
ENSMUSG00000094870	protein_coding	Zfp131	ENSMUST00000178271	protein_coding	principal3	13	-1	119790806	2966
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000162994	protein_coding		5	-1	66618774	447
ENSMUSG00000032758	protein_coding	Kap	ENSMUST00000048032	protein_coding	principal2	6	-1	133853762	707
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000159357	protein_coding		5	-1	66514837	254
ENSMUSG00000070323	protein_coding	Mmp27	ENSMUST00000120900	protein_coding	principal1	9	1	7571396	1662
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000161716	protein_coding		5	-1	66546957	652
ENSMUSG00000091845	processed_pseudogene	Rpl36-ps12	ENSMUST00000025040	processed_pseudogene		6	-1	108140509	390
ENSMUSG00000043760	protein_coding	Pkhd1	ENSMUST00000088448	protein_coding	principal1	1	-1	20618064	12935
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000191367	protein_coding		1	-1	73963043	711
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000161936	retained_intron		5	-1	66618672	629
ENSMUSG00000032758	protein_coding	Kap	ENSMUST00000203168	protein_coding	alternative2	6	-1	133853673	464
ENSMUSG00000070323	protein_coding	Mmp27	ENSMUST00000151853	protein_coding		9	1	7571458	1673
ENSMUSG00000070568	protein_coding	Slc6a21	ENSMUST00000210861	protein_coding	principal1	7	1	45277513	2838
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000188942	retained_intron		1	-1	73987063	1852
ENSMUSG00000026943	protein_coding	Lcn12	ENSMUST00000028312	protein_coding	principal2	2	-1	25493911	716
ENSMUSG00000113146	processed_pseudogene	Gm47406	ENSMUST00000221304	processed_pseudogene		13	1	9892910	1141
ENSMUSG00000043760	protein_coding	Pkhd1	ENSMUST00000132647	processed_transcript		1	-1	20409448	615
ENSMUSG00000113261	sense_intronic	Gm47404	ENSMUST00000222625	sense_intronic		13	-1	10180807	2705
ENSMUSG00000094870	protein_coding	Zfp131	ENSMUST00000223722	protein_coding	alternative2	13	-1	119790889	3109
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000159847	retained_intron		5	-1	66618688	3037
ENSMUSG00000070323	protein_coding	Mmp27	ENSMUST00000152878	protein_coding		9	1	7571463	1903
ENSMUSG00000070568	protein_coding	Slc6a21	ENSMUST00000209886	processed_transcript		7	1	45282489	1009
ENSMUSG00000113695	TEC	9330159N22Rik	ENSMUST00000221530	TEC		13	-1	10165774	1031
ENSMUSG00000034154	protein_coding	Ino80	ENSMUST00000049920	protein_coding	principal1	2	-1	119477687	6354
ENSMUSG00000094870	protein_coding	Zfp131	ENSMUST00000223813	protein_coding	principal3	13	-1	119790732	2561
ENSMUSG00000070568	protein_coding	Slc6a21	ENSMUST00000209477	retained_intron		7	1	45282740	445
ENSMUSG00000026943	protein_coding	Lcn12	ENSMUST00000114245	protein_coding	alternative2	2	-1	25493432	619
ENSMUSG00000070568	protein_coding	Slc6a21	ENSMUST00000210207	protein_coding		7	1	45282776	1358
ENSMUSG00000094870	protein_coding	Zfp131	ENSMUST00000223797	protein_coding		13	-1	119776168	522
ENSMUSG00000034154	protein_coding	Ino80	ENSMUST00000110808	protein_coding		2	-1	119477613	3928
ENSMUSG00000029207	protein_coding	Apbb2	ENSMUST00000087256	protein_coding	alternative1	5	-1	66618671	3362
ENSMUSG00000097009	antisense	Gm26861	ENSMUST00000180807	antisense		13	1	10357595	5278
ENSMUSG00000070568	protein_coding	Slc6a21	ENSMUST00000210733	retained_intron		7	1	45287136	1539
ENSMUSG00000097009	antisense	Gm26861	ENSMUST00000222066	antisense		13	1	10554659	822
ENSMUSG00000034154	protein_coding	Ino80	ENSMUST00000138707	retained_intron		2	-1	119439680	406
ENSMUSG00000097009	antisense	Gm26861	ENSMUST00000221649	antisense		13	1	10554673	1749
ENSMUSG00000097009	antisense	Gm26861	ENSMUST00000222633	antisense		13	1	10554673	1039
ENSMUSG00000106706	TEC	C530043K16Rik	ENSMUST00000201865	TEC		5	-1	66595570	3109
ENSMUSG00000097009	antisense	Gm26861	ENSMUST00000223253	antisense		13	1	10554687	1095
ENSMUSG00000094870	protein_coding	Zfp131	ENSMUST00000224946	protein_coding		13	-1	119790738	1783
ENSMUSG00000097009	antisense	Gm26861	ENSMUST00000220536	antisense		13	1	10654890	873
ENSMUSG00000097009	antisense	Gm26861	ENSMUST00000222084	antisense		13	1	10734921	282
ENSMUSG00000106720	TEC	Gm43795	ENSMUST00000202051	TEC		5	-1	66534161	2366
ENSMUSG00000038880	protein_coding	Mrps34	ENSMUST00000043907	protein_coding	principal1	17	1	24895116	918
ENSMUSG00000070568	protein_coding	Slc6a21	ENSMUST00000085364	protein_coding		7	1	45282873	1732
ENSMUSG00000094870	protein_coding	Zfp131	ENSMUST00000225484	nonsense_mediated_decay		13	-1	119782910	889
ENSMUSG00000107155	TEC	Gm43793	ENSMUST00000201645	TEC		5	-1	66347225	1333
ENSMUSG00000043760	protein_coding	Pkhd1	ENSMUST00000147480	retained_intron		1	-1	20618064	1636
ENSMUSG00000113758	lincRNA	Gm47407	ENSMUST00000221705	lincRNA		13	1	10517687	828
ENSMUSG00000113243	lincRNA	Gm36525	ENSMUST00000222590	lincRNA		13	-1	10557707	638
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000173080	polymorphic_pseudogene		17	-1	36084223	1138
ENSMUSG00000106732	TEC	Gm43792	ENSMUST00000202492	TEC		5	-1	66432126	2210
ENSMUSG00000094870	protein_coding	Zfp131	ENSMUST00000224969	processed_transcript		13	-1	119778220	255
ENSMUSG00000043760	protein_coding	Pkhd1	ENSMUST00000128051	processed_transcript		1	-1	20618040	921
ENSMUSG00000094870	protein_coding	Zfp131	ENSMUST00000223812	protein_coding		13	-1	119790701	663
ENSMUSG00000113680	sense_intronic	Gm47405	ENSMUST00000221804	sense_intronic		13	-1	10070866	5563
ENSMUSG00000094870	protein_coding	Zfp131	ENSMUST00000177916	protein_coding	alternative2	13	-1	119790805	3067
ENSMUSG00000089914	antisense	4930486I03Rik	ENSMUST00000161509	antisense		1	1	20356452	788
ENSMUSG00000038880	protein_coding	Mrps34	ENSMUST00000154236	nonsense_mediated_decay		17	1	24895123	1884
ENSMUSG00000090142	processed_pseudogene	Gm15795	ENSMUST00000160969	processed_pseudogene		1	-1	20444810	553
ENSMUSG00000104095	TEC	Gm37315	ENSMUST00000194347	TEC		1	-1	20065548	3479
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000185167	nonsense_mediated_decay		17	-1	36084223	836
ENSMUSG00000007836	protein_coding	Hnrnpa0	ENSMUST00000007980	protein_coding	principal1	13	-1	58128556	2678
ENSMUSG00000055609	protein_coding	Hba-x	ENSMUST00000020531	protein_coding	principal1	11	1	32276400	801
ENSMUSG00000038880	protein_coding	Mrps34	ENSMUST00000138648	retained_intron		17	1	24895135	899
ENSMUSG00000030493	protein_coding	Faap24	ENSMUST00000032704	protein_coding	principal1	7	-1	35396836	1857
ENSMUSG00000114369	antisense	Gm41077	ENSMUST00000224796	antisense		13	1	119756093	773
ENSMUSG00000046159	protein_coding	Chrm3	ENSMUST00000187510	protein_coding	principal1	13	-1	10360844	4336
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000008633	protein_coding	alternative1	4	-1	91372054	3730
ENSMUSG00000101195	unprocessed_pseudogene	Gm9239	ENSMUST00000186942	unprocessed_pseudogene		7	1	41095674	2557
ENSMUSG00000055609	protein_coding	Hba-x	ENSMUST00000145569	protein_coding		11	1	32276893	579
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000195838	polymorphic_pseudogene		17	-1	36084223	1105
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000194244	polymorphic_pseudogene		17	-1	36084223	862
ENSMUSG00000046159	protein_coding	Chrm3	ENSMUST00000223242	retained_intron		13	-1	10360847	2503
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000185087	nonsense_mediated_decay		17	-1	36084223	1064
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000195833	polymorphic_pseudogene		17	-1	36084223	829
ENSMUSG00000082114	processed_pseudogene	Gm13489	ENSMUST00000121234	processed_pseudogene		2	-1	48810555	971
ENSMUSG00000030493	protein_coding	Faap24	ENSMUST00000141001	retained_intron		7	-1	35396713	1690
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000184502	protein_coding	principal1	17	-1	36084223	862
ENSMUSG00000046159	protein_coding	Chrm3	ENSMUST00000190395	processed_transcript		13	-1	10360563	584
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000183560	protein_coding		17	-1	36084223	316
ENSMUSG00000046159	protein_coding	Chrm3	ENSMUST00000063093	protein_coding	principal1	13	-1	9878998	1770
ENSMUSG00000030493	protein_coding	Faap24	ENSMUST00000154597	protein_coding	principal1	7	-1	35396708	831
ENSMUSG00000114134	lincRNA	Gm47408	ENSMUST00000221855	lincRNA		13	1	10700161	584
ENSMUSG00000089645	transcribed_processed_pseudogene	Gm5766	ENSMUST00000160520	processed_transcript		16	1	4229230	1977
ENSMUSG00000113502	TEC	Gm47411	ENSMUST00000222830	TEC		13	-1	10051848	3182
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000183999	protein_coding		17	-1	36084223	358
ENSMUSG00000093924	processed_pseudogene	Gm12623	ENSMUST00000119849	processed_pseudogene		11	-1	60575549	1983
ENSMUSG00000101267	unprocessed_pseudogene	Gm21912	ENSMUST00000186393	unprocessed_pseudogene		Y	-1	54489811	696
ENSMUSG00000089645	transcribed_processed_pseudogene	Gm5766	ENSMUST00000161633	transcribed_processed_pseudogene		16	1	4230301	799
ENSMUSG00000096363	unprocessed_pseudogene	Gm12621	ENSMUST00000177760	unprocessed_pseudogene		11	-1	60592102	382
ENSMUSG00000095680	unprocessed_pseudogene	Gm12627	ENSMUST00000178412	unprocessed_pseudogene		11	-1	60601308	382
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000191264	retained_intron		1	-1	73998468	1373
ENSMUSG00000020922	protein_coding	Lsm12	ENSMUST00000107156	protein_coding		11	-1	102185229	2015
ENSMUSG00000020463	protein_coding	Ppp4r3b	ENSMUST00000102856	protein_coding		11	1	29172890	2410
ENSMUSG00000101783	unprocessed_pseudogene	Gm28698	ENSMUST00000187734	unprocessed_pseudogene		Y	-1	54519435	615
ENSMUSG00000095291	unprocessed_pseudogene	Gm12613	ENSMUST00000180323	unprocessed_pseudogene		11	-1	60610517	382
ENSMUSG00000060441	protein_coding	Trim5	ENSMUST00000098179	protein_coding	principal2	7	-1	104288094	3655
ENSMUSG00000096088	unprocessed_pseudogene	Gm12614	ENSMUST00000179586	unprocessed_pseudogene		11	-1	60619727	382
ENSMUSG00000029366	protein_coding	Dck	ENSMUST00000031311	protein_coding	principal1	5	1	88764996	3078
ENSMUSG00000099466	unprocessed_pseudogene	Gm29304	ENSMUST00000186555	unprocessed_pseudogene		Y	-1	54556307	695
ENSMUSG00000096483	unprocessed_pseudogene	Gm12615	ENSMUST00000177970	unprocessed_pseudogene		11	-1	60628963	382
ENSMUSG00000100089	lincRNA	Gm29305	ENSMUST00000191054	lincRNA		Y	-1	54565757	2167
ENSMUSG00000060441	protein_coding	Trim5	ENSMUST00000051795	protein_coding	alternative2	7	-1	104279732	1467
ENSMUSG00000029366	protein_coding	Dck	ENSMUST00000196967	retained_intron		5	1	88769359	819
ENSMUSG00000073435	protein_coding	Nme3	ENSMUST00000024978	protein_coding	principal1	17	1	24896500	715
ENSMUSG00000020922	protein_coding	Lsm12	ENSMUST00000021297	protein_coding	principal1	11	-1	102185296	2256
ENSMUSG00000094278	processed_pseudogene	Gm12626	ENSMUST00000117339	processed_pseudogene		11	-1	60633029	1983
ENSMUSG00000094005	unprocessed_pseudogene	Gm12625	ENSMUST00000179122	unprocessed_pseudogene		11	-1	60642242	382
ENSMUSG00000073406	polymorphic_pseudogene	H2-Bl	ENSMUST00000192532	polymorphic_pseudogene		17	-1	36084193	995
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000080085	protein_coding	principal1	5	1	3803184	2930
ENSMUSG00000101542	lincRNA	Gm29303	ENSMUST00000189215	lincRNA		Y	1	54604372	1500
ENSMUSG00000022641	protein_coding	Bbx	ENSMUST00000138166	protein_coding	principal3	16	-1	50432390	8743
ENSMUSG00000030652	protein_coding	Coq7	ENSMUST00000098090	protein_coding		7	-1	118533301	1215
ENSMUSG00000094021	protein_coding	Gm3685	ENSMUST00000169215	protein_coding	principal5	14	-1	7044970	984
ENSMUSG00000020922	protein_coding	Lsm12	ENSMUST00000140429	processed_transcript		11	-1	102182881	570
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000199475	retained_intron		5	1	3803185	4828
ENSMUSG00000094021	protein_coding	Gm3685	ENSMUST00000179199	protein_coding	alternative2	14	-1	7044907	618
ENSMUSG00000021037	protein_coding	Ahsa1	ENSMUST00000223352	protein_coding		12	1	87266479	739
ENSMUSG00000031901	protein_coding	Dus2	ENSMUST00000034375	protein_coding	principal1	8	1	106011507	1860
ENSMUSG00000030652	protein_coding	Coq7	ENSMUST00000207046	retained_intron		7	-1	118526734	2733
ENSMUSG00000101542	lincRNA	Gm29303	ENSMUST00000189928	lincRNA		Y	1	54604825	623
ENSMUSG00000101542	lincRNA	Gm29303	ENSMUST00000190435	lincRNA		Y	1	54604825	439
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000186381	processed_transcript		1	-1	74016422	657
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000189571	processed_transcript		1	-1	73998468	635
ENSMUSG00000022641	protein_coding	Bbx	ENSMUST00000066037	protein_coding		16	-1	50432340	4523
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000190389	protein_coding		1	-1	74001567	426
ENSMUSG00000020922	protein_coding	Lsm12	ENSMUST00000137930	processed_transcript		11	-1	102185257	488
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000200577	nonsense_mediated_decay		5	1	3803189	3188
ENSMUSG00000020922	protein_coding	Lsm12	ENSMUST00000153276	processed_transcript		11	-1	102185261	408
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000187281	protein_coding		1	-1	74037133	586
ENSMUSG00000022641	protein_coding	Bbx	ENSMUST00000089404	protein_coding	alternative2	16	-1	50432389	4024
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000188436	retained_intron		1	-1	73997695	2903
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000191204	protein_coding		1	-1	74096825	515
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000188208	protein_coding		1	-1	74096868	412
ENSMUSG00000073435	protein_coding	Nme3	ENSMUST00000150500	processed_transcript		17	1	24896505	516
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000190599	processed_transcript		1	-1	74037157	405
ENSMUSG00000022641	protein_coding	Bbx	ENSMUST00000114488	protein_coding	principal3	16	-1	50330993	3293
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000200386	protein_coding		5	1	3803190	2343
ENSMUSG00000073435	protein_coding	Nme3	ENSMUST00000145688	retained_intron		17	1	24896521	484
ENSMUSG00000055322	protein_coding	Tns1	ENSMUST00000169786	protein_coding	alternative2	1	-1	74124447	9966
ENSMUSG00000030652	protein_coding	Coq7	ENSMUST00000032887	protein_coding	principal1	7	-1	118533356	914
ENSMUSG00000022641	protein_coding	Bbx	ENSMUST00000089399	protein_coding		16	-1	50432374	2539
ENSMUSG00000073435	protein_coding	Nme3	ENSMUST00000125532	retained_intron		17	1	24896523	609
ENSMUSG00000069919	protein_coding	Hba-a1	ENSMUST00000093209	protein_coding	principal1	11	1	32283511	699
ENSMUSG00000110243	antisense	Gm45631	ENSMUST00000210318	antisense		7	1	7295766	1244
ENSMUSG00000031901	protein_coding	Dus2	ENSMUST00000119736	nonsense_mediated_decay		8	1	106011507	1837
ENSMUSG00000073435	protein_coding	Nme3	ENSMUST00000154321	retained_intron		17	1	24896751	450
ENSMUSG00000030652	protein_coding	Coq7	ENSMUST00000209146	protein_coding		7	-1	118533297	799
ENSMUSG00000069919	protein_coding	Hba-a1	ENSMUST00000142555	retained_intron		11	1	32283811	494
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000171023	protein_coding		5	1	3803405	5582
ENSMUSG00000031901	protein_coding	Dus2	ENSMUST00000141374	retained_intron		8	1	106011522	777
ENSMUSG00000020463	protein_coding	Ppp4r3b	ENSMUST00000020755	protein_coding	principal1	11	1	29172890	5125
ENSMUSG00000056987	protein_coding	Fam71d	ENSMUST00000077968	protein_coding	principal2	12	1	78691535	1772
ENSMUSG00000031901	protein_coding	Dus2	ENSMUST00000138524	retained_intron		8	1	106033390	758
ENSMUSG00000030652	protein_coding	Coq7	ENSMUST00000127700	retained_intron		7	-1	118533314	3070
ENSMUSG00000031901	protein_coding	Dus2	ENSMUST00000144904	retained_intron		8	1	106048708	615
ENSMUSG00000020463	protein_coding	Ppp4r3b	ENSMUST00000156280	protein_coding		11	1	29173747	616
ENSMUSG00000056987	protein_coding	Fam71d	ENSMUST00000218697	protein_coding		12	1	78691658	452
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000198079	protein_coding		5	1	3804240	571
ENSMUSG00000020463	protein_coding	Ppp4r3b	ENSMUST00000139283	retained_intron		11	1	29197187	611
ENSMUSG00000020463	protein_coding	Ppp4r3b	ENSMUST00000127621	protein_coding		11	1	29197198	576
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000196098	retained_intron		5	1	3805293	4040
ENSMUSG00000022641	protein_coding	Bbx	ENSMUST00000114477	retained_intron		16	-1	50432389	4516
ENSMUSG00000021037	protein_coding	Ahsa1	ENSMUST00000021425	protein_coding	principal1	12	1	87266698	1377
ENSMUSG00000056987	protein_coding	Fam71d	ENSMUST00000219551	protein_coding	alternative2	12	1	78691675	1601
ENSMUSG00000118330	antisense	Gm30042	ENSMUST00000237496	antisense		19	1	10290926	2372
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000197742	retained_intron		5	1	3812778	608
ENSMUSG00000110457	transcribed_unprocessed_pseudogene	Gm45752	ENSMUST00000212917	processed_transcript		8	1	105973097	3186
ENSMUSG00000110457	transcribed_unprocessed_pseudogene	Gm45752	ENSMUST00000239233	transcribed_unprocessed_pseudogene		8	1	105983740	254
ENSMUSG00000022641	protein_coding	Bbx	ENSMUST00000131695	processed_transcript		16	-1	50429912	1635
ENSMUSG00000056987	protein_coding	Fam71d	ENSMUST00000220396	protein_coding		12	1	78691682	452
ENSMUSG00000021037	protein_coding	Ahsa1	ENSMUST00000222728	retained_intron		12	1	87266710	2252
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000197611	retained_intron		5	1	3815691	4262
ENSMUSG00000020463	protein_coding	Ppp4r3b	ENSMUST00000127818	processed_transcript		11	1	29205625	827
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000199234	retained_intron		5	1	3823158	1914
ENSMUSG00000022641	protein_coding	Bbx	ENSMUST00000142818	retained_intron		16	-1	50432309	3089
ENSMUSG00000000600	protein_coding	Krit1	ENSMUST00000200004	retained_intron		5	1	3827538	3481
ENSMUSG00000042417	protein_coding	Ccno	ENSMUST00000038404	protein_coding	principal1	13	1	112987802	1875
ENSMUSG00000056987	protein_coding	Fam71d	ENSMUST00000219572	retained_intron		12	1	78691688	1587
ENSMUSG00000021037	protein_coding	Ahsa1	ENSMUST00000223002	retained_intron		12	1	87268222	921
ENSMUSG00000020463	protein_coding	Ppp4r3b	ENSMUST00000148759	nonsense_mediated_decay		11	1	29213624	657
ENSMUSG00000022641	protein_coding	Bbx	ENSMUST00000130210	processed_transcript		16	-1	50432347	1291
ENSMUSG00000020566	protein_coding	Atp6v1c2	ENSMUST00000095820	protein_coding	principal2	12	-1	17324712	1549
ENSMUSG00000042417	protein_coding	Ccno	ENSMUST00000225555	retained_intron		13	1	112987804	2478
ENSMUSG00000109263	processed_pseudogene	Gm18058	ENSMUST00000207385	processed_pseudogene		7	1	22048123	492
ENSMUSG00000021037	protein_coding	Ahsa1	ENSMUST00000223239	retained_intron		12	1	87269302	1933
ENSMUSG00000056987	protein_coding	Fam71d	ENSMUST00000220101	nonsense_mediated_decay		12	1	78715401	734
ENSMUSG00000042417	protein_coding	Ccno	ENSMUST00000224100	retained_intron		13	1	112988087	458
ENSMUSG00000082043	processed_pseudogene	Gm12848	ENSMUST00000119777	processed_pseudogene		4	1	115652389	842
ENSMUSG00000056987	protein_coding	Fam71d	ENSMUST00000219507	protein_coding		12	1	78719398	432
ENSMUSG00000081172	processed_pseudogene	Gm12849	ENSMUST00000120013	processed_pseudogene		4	1	115707251	739
ENSMUSG00000069682	transcribed_processed_pseudogene	Gm10275	ENSMUST00000092620	processed_transcript		10	-1	29699380	635
ENSMUSG00000034520	protein_coding	Gjc1	ENSMUST00000068933	protein_coding	principal1	11	-1	102819179	1903
ENSMUSG00000069682	transcribed_processed_pseudogene	Gm10275	ENSMUST00000217340	processed_transcript		10	-1	29699281	365
ENSMUSG00000081234	protein_coding	Olfr1120	ENSMUST00000215163	protein_coding	principal1	2	1	87354815	4404
ENSMUSG00000069682	transcribed_processed_pseudogene	Gm10275	ENSMUST00000168697	transcribed_processed_pseudogene		10	-1	29699290	495
ENSMUSG00000056987	protein_coding	Fam71d	ENSMUST00000220212	nonsense_mediated_decay		12	1	78719550	469
ENSMUSG00000029075	protein_coding	Tnfrsf4	ENSMUST00000030952	protein_coding	principal1	4	1	156013843	1030
ENSMUSG00000056987	protein_coding	Fam71d	ENSMUST00000219314	retained_intron		12	1	78734157	256
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000107118	protein_coding	alternative1	4	-1	91372069	3797
ENSMUSG00000034520	protein_coding	Gjc1	ENSMUST00000107075	protein_coding	principal1	11	-1	102804901	2314
ENSMUSG00000101650	unprocessed_pseudogene	Gm6820	ENSMUST00000188803	unprocessed_pseudogene		7	1	41121222	2173
ENSMUSG00000081234	protein_coding	Olfr1120	ENSMUST00000058737	protein_coding	principal1	2	1	87357426	1018
ENSMUSG00000096283	protein_coding	Gm6176	ENSMUST00000207633	protein_coding	principal1	7	-1	22056305	1581
ENSMUSG00000096283	protein_coding	Gm6176	ENSMUST00000178209	protein_coding	principal1	7	-1	22051504	906
ENSMUSG00000034520	protein_coding	Gjc1	ENSMUST00000155089	retained_intron		11	-1	102805788	3413
ENSMUSG00000109041	processed_pseudogene	Gm18465	ENSMUST00000207468	processed_pseudogene		7	1	22060442	369
ENSMUSG00000020566	protein_coding	Atp6v1c2	ENSMUST00000140751	nonsense_mediated_decay		12	-1	17324665	1397
ENSMUSG00000050671	protein_coding	Ism2	ENSMUST00000125733	protein_coding	principal1	12	-1	87299705	2526
ENSMUSG00000034520	protein_coding	Gjc1	ENSMUST00000092567	protein_coding	principal1	11	-1	102819700	1890
ENSMUSG00000070852	protein_coding	Olfr1121	ENSMUST00000213792	protein_coding	principal1	2	1	87369895	1996
ENSMUSG00000003814	protein_coding	Calr	ENSMUST00000003912	protein_coding	principal1	8	-1	84846934	2184
ENSMUSG00000111427	processed_pseudogene	Gm6390	ENSMUST00000215034	processed_pseudogene		10	1	29781411	589
ENSMUSG00000040367	protein_coding	Lrrd1	ENSMUST00000044039	protein_coding	principal1	5	1	3845173	2951
ENSMUSG00000029075	protein_coding	Tnfrsf4	ENSMUST00000143576	processed_transcript		4	1	156013856	1090
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000107120	protein_coding	alternative1	4	-1	91376463	4191
ENSMUSG00000070852	protein_coding	Olfr1121	ENSMUST00000062555	protein_coding	principal1	2	1	87371534	945
ENSMUSG00000111195	lincRNA	Gm48215	ENSMUST00000216752	lincRNA		10	-1	30001432	411
ENSMUSG00000111195	lincRNA	Gm48215	ENSMUST00000213166	lincRNA		10	-1	30004378	272
ENSMUSG00000034520	protein_coding	Gjc1	ENSMUST00000131164	processed_transcript		11	-1	102819210	247
ENSMUSG00000029075	protein_coding	Tnfrsf4	ENSMUST00000127377	processed_transcript		4	1	156014249	459
ENSMUSG00000040367	protein_coding	Lrrd1	ENSMUST00000143027	protein_coding		5	1	3845187	661
ENSMUSG00000050671	protein_coding	Ism2	ENSMUST00000145714	processed_transcript		12	-1	87287073	755
ENSMUSG00000050671	protein_coding	Ism2	ENSMUST00000051601	protein_coding		12	-1	87287137	1350
ENSMUSG00000099979	processed_pseudogene	Gm5896	ENSMUST00000189662	processed_pseudogene		7	1	41191113	1024
ENSMUSG00000084237	processed_pseudogene	Gm11781	ENSMUST00000118328	processed_pseudogene		4	-1	5603395	472
ENSMUSG00000003814	protein_coding	Calr	ENSMUST00000154774	retained_intron		8	-1	84844916	943
ENSMUSG00000078737	unprocessed_pseudogene	Gm2128	ENSMUST00000108009	unprocessed_pseudogene		7	1	41155478	2560
ENSMUSG00000074311	protein_coding	Vmn1r139	ENSMUST00000173668	protein_coding		7	1	22069057	753
ENSMUSG00000099906	lincRNA	Gm28653	ENSMUST00000227082	lincRNA		1	1	20669882	521
ENSMUSG00000049062	unprocessed_pseudogene	Gm9244	ENSMUST00000056767	unprocessed_pseudogene		7	1	41247021	2129
ENSMUSG00000020566	protein_coding	Atp6v1c2	ENSMUST00000020884	protein_coding		12	-1	17324703	1569
ENSMUSG00000003814	protein_coding	Calr	ENSMUST00000128028	retained_intron		8	-1	84846830	854
ENSMUSG00000099657	unprocessed_pseudogene	Gm28667	ENSMUST00000189873	unprocessed_pseudogene		7	1	41183751	2171
ENSMUSG00000099906	lincRNA	Gm28653	ENSMUST00000185494	lincRNA		1	1	20679023	5276
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000111603	protein_coding	principal2	14	1	52110704	5380
ENSMUSG00000003814	protein_coding	Calr	ENSMUST00000125998	retained_intron		8	-1	84846826	721
ENSMUSG00000074311	protein_coding	Vmn1r139	ENSMUST00000169730	protein_coding	principal1	7	1	22096867	894
ENSMUSG00000108395	lincRNA	Gm34811	ENSMUST00000206580	lincRNA		7	-1	41209904	445
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000102799	protein_coding	principal4	4	-1	91399984	3840
ENSMUSG00000100376	processed_pseudogene	Gm28060	ENSMUST00000191554	processed_pseudogene		7	-1	41163965	189
ENSMUSG00000113578	processed_pseudogene	Gm48642	ENSMUST00000223243	processed_pseudogene		12	1	88503768	442
ENSMUSG00000031898	protein_coding	Dpep3	ENSMUST00000034371	protein_coding	principal1	8	-1	105979429	1698
ENSMUSG00000020566	protein_coding	Atp6v1c2	ENSMUST00000156727	protein_coding		12	-1	17308413	1279
ENSMUSG00000108779	TEC	Gm45691	ENSMUST00000206905	TEC		7	1	41234286	1120
ENSMUSG00000113213	processed_pseudogene	Gm19540	ENSMUST00000221843	processed_pseudogene		12	-1	88590437	810
ENSMUSG00000108274	lincRNA	Gm44169	ENSMUST00000205133	lincRNA		6	1	101519655	359
ENSMUSG00000111554	unprocessed_pseudogene	Gm232	ENSMUST00000216549	unprocessed_pseudogene		10	1	30010951	2559
ENSMUSG00000020566	protein_coding	Atp6v1c2	ENSMUST00000221129	protein_coding	alternative1	12	-1	17324730	1425
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000128599	retained_intron		4	-1	91254582	930
ENSMUSG00000106305	processed_pseudogene	Gm42911	ENSMUST00000199360	processed_pseudogene		5	-1	88805223	1630
ENSMUSG00000111001	processed_pseudogene	Gm8767	ENSMUST00000215786	processed_pseudogene		10	-1	30085334	1070
ENSMUSG00000101196	transcribed_unprocessed_pseudogene	Gm6866	ENSMUST00000206653	processed_transcript		7	1	41210033	3081
ENSMUSG00000020566	protein_coding	Atp6v1c2	ENSMUST00000222103	nonsense_mediated_decay		12	-1	17324713	644
ENSMUSG00000101196	transcribed_unprocessed_pseudogene	Gm6866	ENSMUST00000188559	transcribed_unprocessed_pseudogene		7	1	41215512	2549
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000107116	protein_coding	alternative1	4	-1	91313403	1282
ENSMUSG00000086066	lincRNA	4930423M02Rik	ENSMUST00000156903	lincRNA		4	1	5632328	1205
ENSMUSG00000096304	protein_coding	Gm16451	ENSMUST00000173484	protein_coding	principal1	7	-1	22118245	924
ENSMUSG00000105640	lincRNA	Gm42912	ENSMUST00000197195	lincRNA		5	1	88793896	716
ENSMUSG00000108340	processed_pseudogene	Gm44520	ENSMUST00000205447	processed_pseudogene		7	-1	41274396	802
ENSMUSG00000020566	protein_coding	Atp6v1c2	ENSMUST00000153090	protein_coding		12	-1	17329348	640
ENSMUSG00000086066	lincRNA	4930423M02Rik	ENSMUST00000130895	lincRNA		4	1	5632336	732
ENSMUSG00000110776	unprocessed_pseudogene	Gm2829	ENSMUST00000213121	unprocessed_pseudogene		10	1	30179726	499
ENSMUSG00000020566	protein_coding	Atp6v1c2	ENSMUST00000127185	protein_coding		12	-1	17324730	316
ENSMUSG00000108754	lincRNA	Gm44748	ENSMUST00000206040	lincRNA		7	-1	41284220	658
ENSMUSG00000020566	protein_coding	Atp6v1c2	ENSMUST00000143131	protein_coding		12	-1	17329359	637
ENSMUSG00000096348	protein_coding	Vmn1r250	ENSMUST00000098722	protein_coding	principal1	7	-1	22134741	966
ENSMUSG00000113045	TEC	Gm48621	ENSMUST00000220764	TEC		13	-1	17709864	1262
ENSMUSG00000074817	protein_coding	Papolb	ENSMUST00000099400	protein_coding	principal1	5	-1	142530076	4239
ENSMUSG00000072259	protein_coding	Gm5592	ENSMUST00000206490	protein_coding	principal1	7	1	41153841	2623
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000107109	protein_coding	alternative1	4	-1	91376434	1591
ENSMUSG00000037348	protein_coding	Paqr7	ENSMUST00000081525	protein_coding	principal1	4	1	134496697	2351
ENSMUSG00000025929	protein_coding	Il17a	ENSMUST00000027061	protein_coding	principal1	1	1	20730905	1171
ENSMUSG00000095273	protein_coding	Vmn1r142	ENSMUST00000169697	protein_coding	principal1	7	-1	22164035	918
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000107111	protein_coding		4	-1	91376434	1552
ENSMUSG00000072259	protein_coding	Gm5592	ENSMUST00000097044	protein_coding	principal1	7	1	41284327	3033
ENSMUSG00000035735	protein_coding	Dagla	ENSMUST00000039327	protein_coding	principal1	19	-1	10304877	5634
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000176469	retained_intron		4	-1	91376307	3195
ENSMUSG00000039496	protein_coding	Cdnf	ENSMUST00000036350	protein_coding	principal1	2	1	3513065	3013
ENSMUSG00000096071	protein_coding	Vmn1r143	ENSMUST00000171622	protein_coding	principal1	7	1	22189377	924
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000177109	protein_coding		4	-1	91356682	425
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000147611	protein_coding		4	-1	91373030	408
ENSMUSG00000097717	processed_transcript	1700066J03Rik	ENSMUST00000224280	lincRNA		13	1	58146949	516
ENSMUSG00000097717	processed_transcript	1700066J03Rik	ENSMUST00000225637	retained_intron		13	1	58148544	431
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000176362	protein_coding		4	-1	91371956	511
ENSMUSG00000037348	protein_coding	Paqr7	ENSMUST00000134506	protein_coding		4	1	134496975	670
ENSMUSG00000039496	protein_coding	Cdnf	ENSMUST00000140610	processed_transcript		2	1	3513030	349
ENSMUSG00000094981	protein_coding	Vmn1r251	ENSMUST00000163096	protein_coding	principal1	7	-1	22201264	924
ENSMUSG00000039496	protein_coding	Cdnf	ENSMUST00000132566	processed_transcript		2	1	3513884	423
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000144769	processed_transcript		4	-1	91399976	450
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000176151	processed_transcript		4	-1	91400785	415
ENSMUSG00000024007	protein_coding	Ppil1	ENSMUST00000024802	protein_coding	principal1	17	-1	29264186	1462
ENSMUSG00000097717	processed_transcript	1700066J03Rik	ENSMUST00000181908	lincRNA		13	1	58148777	444
ENSMUSG00000008489	protein_coding	Elavl2	ENSMUST00000107124	protein_coding	alternative1	4	-1	91376496	4127
ENSMUSG00000094149	protein_coding	Vmn1r252	ENSMUST00000167253	protein_coding	principal1	7	-1	22229484	921
ENSMUSG00000083377	processed_pseudogene	Gm12653	ENSMUST00000117778	processed_pseudogene		4	1	91365379	561
ENSMUSG00000053687	protein_coding	Dpep2	ENSMUST00000117555	protein_coding	alternative2	8	-1	105991749	1383
ENSMUSG00000027746	protein_coding	Ufm1	ENSMUST00000146598	protein_coding	principal1	3	-1	53863830	4890
ENSMUSG00000109411	processed_pseudogene	Gm18059	ENSMUST00000208073	processed_pseudogene		7	1	22253964	580
ENSMUSG00000037348	protein_coding	Paqr7	ENSMUST00000136171	protein_coding		4	1	134496975	890
ENSMUSG00000024007	protein_coding	Ppil1	ENSMUST00000234880	processed_transcript		17	-1	29252703	1117
ENSMUSG00000024007	protein_coding	Ppil1	ENSMUST00000234315	processed_transcript		17	-1	29251995	1050
ENSMUSG00000101948	unprocessed_pseudogene	Gm4557	ENSMUST00000185826	unprocessed_pseudogene		7	-1	22257343	907
ENSMUSG00000024007	protein_coding	Ppil1	ENSMUST00000234139	processed_transcript		17	-1	29252693	1101
ENSMUSG00000109444	processed_pseudogene	Gm18466	ENSMUST00000209147	processed_pseudogene		7	1	22266363	499
ENSMUSG00000035735	protein_coding	Dagla	ENSMUST00000125567	nonsense_mediated_decay		19	-1	10304857	5588
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000208363	nonsense_mediated_decay		8	1	3353415	2255
ENSMUSG00000079020	protein_coding	Slc45a4	ENSMUST00000151288	protein_coding	principal2	15	-1	73624744	7509
ENSMUSG00000108944	processed_pseudogene	Gm4558	ENSMUST00000207886	processed_pseudogene		7	1	22285469	521
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000207059	retained_intron		8	1	3353437	1685
ENSMUSG00000035735	protein_coding	Dagla	ENSMUST00000156361	processed_transcript		19	-1	10256871	695
ENSMUSG00000024007	protein_coding	Ppil1	ENSMUST00000135123	nonsense_mediated_decay		17	-1	29263948	1476
ENSMUSG00000037348	protein_coding	Paqr7	ENSMUST00000125330	protein_coding		4	1	134496981	650
ENSMUSG00000093871	protein_coding	Vmn1r253	ENSMUST00000172551	protein_coding	principal1	7	-1	22329717	924
ENSMUSG00000027746	protein_coding	Ufm1	ENSMUST00000148338	retained_intron		3	-1	53863689	381
ENSMUSG00000027746	protein_coding	Ufm1	ENSMUST00000029309	nonsense_mediated_decay		3	-1	53863762	290
ENSMUSG00000024007	protein_coding	Ppil1	ENSMUST00000136811	processed_transcript		17	-1	29256907	734
ENSMUSG00000027746	protein_coding	Ufm1	ENSMUST00000122330	protein_coding		3	-1	53863766	637
ENSMUSG00000037348	protein_coding	Paqr7	ENSMUST00000155449	processed_transcript		4	1	134497041	437
ENSMUSG00000015942	protein_coding	Gtf2ird2	ENSMUST00000123941	nonsense_mediated_decay		5	1	134184019	3377
ENSMUSG00000024007	protein_coding	Ppil1	ENSMUST00000129157	processed_transcript		17	-1	29263938	508
ENSMUSG00000027746	protein_coding	Ufm1	ENSMUST00000152414	retained_intron		3	-1	53863762	787
ENSMUSG00000037348	protein_coding	Paqr7	ENSMUST00000095074	protein_coding	principal1	4	1	134497004	3550
ENSMUSG00000053687	protein_coding	Dpep2	ENSMUST00000034373	protein_coding	principal4	8	-1	105991759	1702
ENSMUSG00000079020	protein_coding	Slc45a4	ENSMUST00000144936	protein_coding		15	-1	73605467	3639
ENSMUSG00000079020	protein_coding	Slc45a4	ENSMUST00000076224	protein_coding	principal2	15	-1	73617324	4240
ENSMUSG00000117614	antisense	Gm50068	ENSMUST00000234345	antisense		17	1	29263999	1210
ENSMUSG00000075266	protein_coding	Cenpw	ENSMUST00000216853	protein_coding	alternative1	10	-1	30200492	4143
ENSMUSG00000073063	protein_coding	Hbq1b	ENSMUST00000101387	protein_coding	principal1	11	1	32286965	562
ENSMUSG00000111764	processed_pseudogene	Gm47616	ENSMUST00000214781	processed_pseudogene		9	1	7599494	147
ENSMUSG00000073063	protein_coding	Hbq1b	ENSMUST00000151724	retained_intron		11	1	32287001	689
ENSMUSG00000093677	sense_overlapping	Gm20712	ENSMUST00000176387	sense_overlapping		15	-1	58781951	1491
ENSMUSG00000026765	protein_coding	Lypd6b	ENSMUST00000028103	protein_coding	principal1	2	1	49787688	2286
ENSMUSG00000053687	protein_coding	Dpep2	ENSMUST00000150001	retained_intron		8	-1	105991722	1523
ENSMUSG00000053687	protein_coding	Dpep2	ENSMUST00000149057	retained_intron		8	-1	105991750	2936
ENSMUSG00000115768	protein_coding	Dpep2nb	ENSMUST00000227778	protein_coding	principal1	8	-1	106005975	1097
ENSMUSG00000026765	protein_coding	Lypd6b	ENSMUST00000153422	processed_transcript		2	1	49787731	344
ENSMUSG00000079020	protein_coding	Slc45a4	ENSMUST00000132607	protein_coding		15	-1	73596529	2457
ENSMUSG00000054920	protein_coding	Klhl5	ENSMUST00000204097	protein_coding	alternative1	5	1	65107539	3149
ENSMUSG00000029386	protein_coding	Tctn2	ENSMUST00000185820	processed_transcript		5	1	124598749	2733
ENSMUSG00000026765	protein_coding	Lypd6b	ENSMUST00000129867	processed_transcript		2	1	49840090	565
ENSMUSG00000029386	protein_coding	Tctn2	ENSMUST00000132090	retained_intron		5	1	124598784	2467
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000180646	nonsense_mediated_decay		14	1	52110903	4557
ENSMUSG00000069917	protein_coding	Hba-a2	ENSMUST00000093207	protein_coding	principal1	11	1	32296489	554
ENSMUSG00000079020	protein_coding	Slc45a4	ENSMUST00000152558	processed_transcript		15	-1	73588962	438
ENSMUSG00000029386	protein_coding	Tctn2	ENSMUST00000152822	retained_intron		5	1	124598787	2313
ENSMUSG00000102055	antisense	Gm28913	ENSMUST00000186240	antisense		1	1	131263330	364
ENSMUSG00000045538	protein_coding	Ddx28	ENSMUST00000058579	protein_coding	principal1	8	-1	106011882	2262
ENSMUSG00000075266	protein_coding	Cenpw	ENSMUST00000099985	protein_coding	principal2	10	-1	30200560	1532
ENSMUSG00000029386	protein_coding	Tctn2	ENSMUST00000125191	retained_intron		5	1	124598792	3400
ENSMUSG00000079020	protein_coding	Slc45a4	ENSMUST00000130765	protein_coding		15	-1	73645762	753
ENSMUSG00000102027	antisense	Gm28914	ENSMUST00000188115	antisense		1	1	131259507	667
ENSMUSG00000085357	lincRNA	Gm13480	ENSMUST00000125095	lincRNA		2	-1	49812948	1000
ENSMUSG00000069917	protein_coding	Hba-a2	ENSMUST00000147010	retained_intron		11	1	32296628	494
ENSMUSG00000079020	protein_coding	Slc45a4	ENSMUST00000150409	processed_transcript		15	-1	73645345	581
ENSMUSG00000042349	protein_coding	Ikbke	ENSMUST00000162437	retained_intron		1	-1	131265131	5856
ENSMUSG00000079020	protein_coding	Slc45a4	ENSMUST00000054266	protein_coding	alternative2	15	-1	73624744	4664
ENSMUSG00000029386	protein_coding	Tctn2	ENSMUST00000130912	processed_transcript		5	1	124598797	2316
ENSMUSG00000080937	processed_pseudogene	Gm13510	ENSMUST00000118659	processed_pseudogene		2	1	49185018	429
ENSMUSG00000116929	TEC	2210009P08Rik	ENSMUST00000231393	TEC		16	-1	97466948	465
ENSMUSG00000054920	protein_coding	Klhl5	ENSMUST00000101191	protein_coding	principal3	5	1	65131075	3610
ENSMUSG00000114001	lincRNA	Gm48664	ENSMUST00000220698	lincRNA		12	1	88631356	568
ENSMUSG00000113997	lincRNA	1700040E09Rik	ENSMUST00000222440	lincRNA		12	1	88632269	606
ENSMUSG00000020295	protein_coding	Hbq1a	ENSMUST00000020535	protein_coding	principal1	11	1	32300069	604
ENSMUSG00000113538	lincRNA	Gm48665	ENSMUST00000222755	lincRNA		12	-1	88631878	1423
ENSMUSG00000057722	protein_coding	Lepr	ENSMUST00000102777	protein_coding	principal3	4	1	101717404	3410
ENSMUSG00000054920	protein_coding	Klhl5	ENSMUST00000204348	protein_coding		5	1	65131076	3380
ENSMUSG00000054920	protein_coding	Klhl5	ENSMUST00000204829	retained_intron		5	1	65131152	2431
ENSMUSG00000054920	protein_coding	Klhl5	ENSMUST00000204479	processed_transcript		5	1	65131403	594
ENSMUSG00000110651	processed_pseudogene	Gm45770	ENSMUST00000212105	processed_pseudogene		8	-1	18906533	616
ENSMUSG00000020238	protein_coding	Ncln	ENSMUST00000020463	protein_coding	principal2	10	-1	81496392	3118
ENSMUSG00000087685	processed_transcript	1700122E12Rik	ENSMUST00000147538	processed_transcript		8	1	84847188	479
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000180484	retained_intron		14	1	52110922	945
ENSMUSG00000054920	protein_coding	Klhl5	ENSMUST00000203561	processed_transcript		5	1	65131671	1855
ENSMUSG00000038587	protein_coding	Akap12	ENSMUST00000045730	protein_coding	principal2	10	1	4266380	6195
ENSMUSG00000029313	protein_coding	Aff1	ENSMUST00000054979	protein_coding	alternative2	5	1	103754162	8323
ENSMUSG00000087685	processed_transcript	1700122E12Rik	ENSMUST00000141347	processed_transcript		8	1	84847438	377
ENSMUSG00000054920	protein_coding	Klhl5	ENSMUST00000203538	nonsense_mediated_decay		5	1	65156070	2196
ENSMUSG00000038587	protein_coding	Akap12	ENSMUST00000239373	protein_coding	alternative2	10	1	4334545	5956
ENSMUSG00000082389	processed_pseudogene	Mkrn1-ps1	ENSMUST00000122035	processed_pseudogene		5	-1	88839399	1390
ENSMUSG00000038587	protein_coding	Akap12	ENSMUST00000239220	protein_coding		10	1	4341195	580
ENSMUSG00000084335	unprocessed_pseudogene	Gm12619	ENSMUST00000117369	unprocessed_pseudogene		11	-1	60657857	385
ENSMUSG00000018698	protein_coding	Lhx1	ENSMUST00000018842	protein_coding	principal1	11	-1	84525535	3846
ENSMUSG00000038587	protein_coding	Akap12	ENSMUST00000216139	protein_coding	alternative2	10	1	4346808	5950
ENSMUSG00000095605	unprocessed_pseudogene	Gm12624	ENSMUST00000177615	unprocessed_pseudogene		11	-1	60667065	382
ENSMUSG00000029313	protein_coding	Aff1	ENSMUST00000153165	protein_coding		5	1	103754564	2753
ENSMUSG00000020238	protein_coding	Ncln	ENSMUST00000118498	protein_coding	alternative1	10	-1	81496326	2841
ENSMUSG00000018698	protein_coding	Lhx1	ENSMUST00000184646	protein_coding		11	-1	84522331	1201
ENSMUSG00000029313	protein_coding	Aff1	ENSMUST00000152145	retained_intron		5	1	103784359	688
ENSMUSG00000029313	protein_coding	Aff1	ENSMUST00000031256	protein_coding	principal4	5	1	103754573	8312
ENSMUSG00000038587	protein_coding	Akap12	ENSMUST00000215696	protein_coding	alternative2	10	1	4347768	5931
ENSMUSG00000018698	protein_coding	Lhx1	ENSMUST00000176503	retained_intron		11	-1	84522067	766
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000190591	processed_transcript		15	1	9071260	4136
ENSMUSG00000081278	processed_pseudogene	Gm13186	ENSMUST00000118031	processed_pseudogene		2	1	3531285	316
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000098966	protein_coding		8	1	3353437	2945
ENSMUSG00000082580	processed_pseudogene	Gm13182	ENSMUST00000122241	processed_pseudogene		2	1	3550757	312
ENSMUSG00000018698	protein_coding	Lhx1	ENSMUST00000092827	protein_coding		11	-1	84522711	382
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000227682	processed_transcript		15	1	9071575	710
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000189437	processed_transcript		15	1	9071681	2534
ENSMUSG00000020238	protein_coding	Ncln	ENSMUST00000151701	retained_intron		10	-1	81488397	844
ENSMUSG00000020238	protein_coding	Ncln	ENSMUST00000124437	protein_coding		10	-1	81488217	451
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000190874	processed_transcript		15	1	9071687	1290
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000228397	processed_transcript		15	1	9075277	459
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000181823	retained_intron		14	1	52110929	7878
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000189211	processed_transcript		15	1	9085800	567
ENSMUSG00000006906	protein_coding	Stambp	ENSMUST00000205648	retained_intron		6	-1	83572427	8383
ENSMUSG00000020238	protein_coding	Ncln	ENSMUST00000125521	retained_intron		10	-1	81488643	694
ENSMUSG00000025791	protein_coding	Pgm1	ENSMUST00000058351	protein_coding	principal2	4	1	99929414	2371
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000228453	processed_transcript		15	1	9092209	670
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000227928	processed_transcript		15	1	9094647	421
ENSMUSG00000020238	protein_coding	Ncln	ENSMUST00000136721	retained_intron		10	-1	81488641	655
ENSMUSG00000025791	protein_coding	Pgm1	ENSMUST00000102783	protein_coding	alternative1	4	1	99955744	2523
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000188194	protein_coding		15	1	9100156	551
ENSMUSG00000020238	protein_coding	Ncln	ENSMUST00000130400	retained_intron		10	-1	81490268	690
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000186069	retained_intron		15	1	9102988	434
ENSMUSG00000020238	protein_coding	Ncln	ENSMUST00000153205	retained_intron		10	-1	81492055	428
ENSMUSG00000020238	protein_coding	Ncln	ENSMUST00000151680	retained_intron		10	-1	81496342	480
ENSMUSG00000107890	processed_pseudogene	Gm43968	ENSMUST00000203388	processed_pseudogene		6	1	133864054	389
ENSMUSG00000107771	processed_pseudogene	Gm8956	ENSMUST00000203939	processed_pseudogene		6	-1	133932409	825
ENSMUSG00000074651	protein_coding	Mcidas	ENSMUST00000092089	protein_coding	principal1	13	1	112993845	2377
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000111600	protein_coding		14	1	52110939	4565
ENSMUSG00000057722	protein_coding	Lepr	ENSMUST00000106921	protein_coding	alternative2	4	1	101717404	5542
ENSMUSG00000086908	lincRNA	Gm13598	ENSMUST00000147939	lincRNA		2	-1	67194735	625
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000181401	protein_coding	alternative2	14	1	52112157	3963
ENSMUSG00000087043	antisense	Gm13599	ENSMUST00000134476	antisense		2	-1	67396491	678
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000181673	retained_intron		14	1	52114780	1826
ENSMUSG00000026857	protein_coding	Ntmt1	ENSMUST00000041830	protein_coding	principal1	2	1	30807826	1387
ENSMUSG00000050447	protein_coding	Lypd6	ENSMUST00000053208	protein_coding	principal1	2	1	50066464	3620
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000180433	retained_intron		14	1	52118977	465
ENSMUSG00000057722	protein_coding	Lepr	ENSMUST00000037552	protein_coding	alternative2	4	1	101717404	4127
ENSMUSG00000050447	protein_coding	Lypd6	ENSMUST00000128451	protein_coding		2	1	50066462	563
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000181709	nonsense_mediated_decay		14	1	52121109	757
ENSMUSG00000019977	protein_coding	Hbs1l	ENSMUST00000020153	protein_coding	alternative2	10	1	21295979	2793
ENSMUSG00000015942	protein_coding	Gtf2ird2	ENSMUST00000016086	protein_coding	principal1	5	1	134184027	3482
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000134620	retained_intron		2	1	67173834	1966
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000181297	retained_intron		14	1	52136532	902
ENSMUSG00000019977	protein_coding	Hbs1l	ENSMUST00000218032	protein_coding		10	1	21296009	437
ENSMUSG00000050447	protein_coding	Lypd6	ENSMUST00000126337	protein_coding		2	1	50165401	351
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000180901	retained_intron		14	1	52136577	3212
ENSMUSG00000050447	protein_coding	Lypd6	ENSMUST00000112712	protein_coding	principal1	2	1	50066429	3495
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000180513	protein_coding		14	1	52145364	213
ENSMUSG00000019977	protein_coding	Hbs1l	ENSMUST00000061324	protein_coding		10	1	21296018	1998
ENSMUSG00000052142	protein_coding	Rasal3	ENSMUST00000063824	protein_coding	principal3	17	-1	32403583	3681
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000181627	nonsense_mediated_decay		14	1	52145424	970
ENSMUSG00000050447	protein_coding	Lypd6	ENSMUST00000169232	protein_coding	principal1	2	1	50128369	3499
ENSMUSG00000015942	protein_coding	Gtf2ird2	ENSMUST00000201098	processed_transcript		5	1	134198017	628
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000180388	retained_intron		14	1	52147000	834
ENSMUSG00000019977	protein_coding	Hbs1l	ENSMUST00000218785	retained_intron		10	1	21296030	948
ENSMUSG00000015942	protein_coding	Gtf2ird2	ENSMUST00000128842	retained_intron		5	1	134206657	688
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000181017	protein_coding		14	1	52149518	966
ENSMUSG00000015942	protein_coding	Gtf2ird2	ENSMUST00000135588	protein_coding		5	1	134214109	618
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000181862	retained_intron		14	1	52149607	585
ENSMUSG00000015942	protein_coding	Gtf2ird2	ENSMUST00000152587	protein_coding		5	1	134214110	693
ENSMUSG00000026857	protein_coding	Ntmt1	ENSMUST00000138889	nonsense_mediated_decay		2	1	30807941	1192
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000180500	protein_coding		14	1	52150440	602
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000181208	retained_intron		14	1	52152058	415
ENSMUSG00000057132	protein_coding	Rpgrip1	ENSMUST00000181736	nonsense_mediated_decay		14	1	52158451	1733
ENSMUSG00000100466	TEC	Gm29572	ENSMUST00000190305	TEC		3	1	104706585	283
ENSMUSG00000026857	protein_coding	Ntmt1	ENSMUST00000152374	protein_coding		2	1	30807942	763
ENSMUSG00000026857	protein_coding	Ntmt1	ENSMUST00000128509	processed_transcript		2	1	30807957	445
ENSMUSG00000026857	protein_coding	Ntmt1	ENSMUST00000126037	processed_transcript		2	1	30807994	981
ENSMUSG00000026857	protein_coding	Ntmt1	ENSMUST00000129712	nonsense_mediated_decay		2	1	30808113	837
ENSMUSG00000026857	protein_coding	Ntmt1	ENSMUST00000128303	protein_coding		2	1	30808190	453
ENSMUSG00000019977	protein_coding	Hbs1l	ENSMUST00000219915	protein_coding	principal2	10	1	21296033	2733
ENSMUSG00000026857	protein_coding	Ntmt1	ENSMUST00000127566	protein_coding		2	1	30817969	558
ENSMUSG00000057722	protein_coding	Lepr	ENSMUST00000145024	protein_coding		4	1	101717407	208
ENSMUSG00000026857	protein_coding	Ntmt1	ENSMUST00000143970	protein_coding		2	1	30819675	715
ENSMUSG00000057722	protein_coding	Lepr	ENSMUST00000128948	processed_transcript		4	1	101768047	787
ENSMUSG00000052142	protein_coding	Rasal3	ENSMUST00000136375	nonsense_mediated_decay		17	-1	32403559	3691
ENSMUSG00000029386	protein_coding	Tctn2	ENSMUST00000100706	protein_coding	principal1	5	1	124598749	2732
ENSMUSG00000099536	processed_pseudogene	Gm9569	ENSMUST00000187492	processed_pseudogene		7	1	31182037	787
ENSMUSG00000104113	TEC	Gm37292	ENSMUST00000192062	TEC		7	1	31208357	758
ENSMUSG00000099357	unprocessed_pseudogene	Scgb1b1-ps	ENSMUST00000189264	unprocessed_pseudogene		7	-1	31256277	268
ENSMUSG00000057722	protein_coding	Lepr	ENSMUST00000156402	processed_transcript		4	1	101771368	889
ENSMUSG00000006906	protein_coding	Stambp	ENSMUST00000206400	protein_coding	principal1	6	-1	83572433	2144
ENSMUSG00000102636	lincRNA	Gm31466	ENSMUST00000195457	lincRNA		3	-1	20506208	916
ENSMUSG00000019977	protein_coding	Hbs1l	ENSMUST00000092674	protein_coding		10	1	21296038	2625
ENSMUSG00000101554	unprocessed_pseudogene	Scgb2b1	ENSMUST00000189372	unprocessed_pseudogene		7	1	31263757	338
ENSMUSG00000028549	protein_coding	Itgb3bp	ENSMUST00000146258	protein_coding	principal1	4	-1	99829186	2806
ENSMUSG00000057722	protein_coding	Lepr	ENSMUST00000151733	processed_transcript		4	1	101788914	415
ENSMUSG00000020701	protein_coding	Tmem132e	ENSMUST00000092852	protein_coding		11	1	82388900	4105
ENSMUSG00000109759	lincRNA	1700011L03Rik	ENSMUST00000210613	lincRNA		8	-1	46948799	608
ENSMUSG00000033233	protein_coding	Trim45	ENSMUST00000094048	protein_coding		3	1	100922202	1815
ENSMUSG00000019977	protein_coding	Hbs1l	ENSMUST00000218714	protein_coding		10	1	21296058	563
ENSMUSG00000052142	protein_coding	Rasal3	ENSMUST00000142203	retained_intron		17	-1	32403568	3849
ENSMUSG00000052142	protein_coding	Rasal3	ENSMUST00000141714	retained_intron		17	-1	32391508	492
ENSMUSG00000006906	protein_coding	Stambp	ENSMUST00000068054	protein_coding	principal1	6	-1	83572729	2364
ENSMUSG00000019977	protein_coding	Hbs1l	ENSMUST00000219345	retained_intron		10	1	21344672	926
ENSMUSG00000027395	protein_coding	Polr1b	ENSMUST00000103205	protein_coding	principal1	2	1	129100995	3998
ENSMUSG00000052142	protein_coding	Rasal3	ENSMUST00000135618	protein_coding	alternative2	17	-1	32403581	3293
ENSMUSG00000019977	protein_coding	Hbs1l	ENSMUST00000218850	retained_intron		10	1	21354650	786
ENSMUSG00000006906	protein_coding	Stambp	ENSMUST00000205369	retained_intron		6	-1	83552132	972
ENSMUSG00000020701	protein_coding	Tmem132e	ENSMUST00000054245	protein_coding	principal1	11	1	82388900	4386
ENSMUSG00000115067	protein_coding	Dpep2	ENSMUST00000081998	protein_coding		8	-1	105996423	1878
ENSMUSG00000019977	protein_coding	Hbs1l	ENSMUST00000220392	retained_intron		10	1	21367401	641
ENSMUSG00000027395	protein_coding	Polr1b	ENSMUST00000028874	protein_coding		2	1	129101027	2769
ENSMUSG00000006906	protein_coding	Stambp	ENSMUST00000206592	protein_coding	principal1	6	-1	83572417	2152
ENSMUSG00000052142	protein_coding	Rasal3	ENSMUST00000137458	protein_coding	alternative2	17	-1	32403537	3272
ENSMUSG00000027395	protein_coding	Polr1b	ENSMUST00000133345	processed_transcript		2	1	129115672	663
ENSMUSG00000020701	protein_coding	Tmem132e	ENSMUST00000132477	processed_transcript		11	1	82389123	639
ENSMUSG00000006906	protein_coding	Stambp	ENSMUST00000205829	retained_intron		6	-1	83551960	404
ENSMUSG00000027395	protein_coding	Polr1b	ENSMUST00000144004	processed_transcript		2	1	129118654	612
ENSMUSG00000112654	antisense	4930455C13Rik	ENSMUST00000218108	antisense		10	-1	21342057	1018
ENSMUSG00000006906	protein_coding	Stambp	ENSMUST00000205345	retained_intron		6	-1	83572439	1307
ENSMUSG00000020701	protein_coding	Tmem132e	ENSMUST00000202598	retained_intron		11	1	82438257	772
ENSMUSG00000052142	protein_coding	Rasal3	ENSMUST00000134723	retained_intron		17	-1	32393726	354
ENSMUSG00000026965	protein_coding	Anapc2	ENSMUST00000028341	protein_coding	principal1	2	1	25272478	3004
ENSMUSG00000027395	protein_coding	Polr1b	ENSMUST00000147727	processed_transcript		2	1	129121711	720
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000115510	protein_coding		6	1	11925881	3353
ENSMUSG00000052142	protein_coding	Rasal3	ENSMUST00000143808	retained_intron		17	-1	32395371	554
ENSMUSG00000115067	protein_coding	Dpep2	ENSMUST00000227363	protein_coding	principal1	8	-1	105996394	1844
ENSMUSG00000108484	transcribed_processed_pseudogene	Gm18537	ENSMUST00000206215	processed_transcript		6	-1	83550361	1503
ENSMUSG00000108484	transcribed_processed_pseudogene	Gm18537	ENSMUST00000205709	transcribed_processed_pseudogene		6	-1	83550381	989
ENSMUSG00000108484	transcribed_processed_pseudogene	Gm18537	ENSMUST00000206792	processed_transcript		6	-1	83550252	602
ENSMUSG00000052142	protein_coding	Rasal3	ENSMUST00000135968	retained_intron		17	-1	32396709	762
ENSMUSG00000033233	protein_coding	Trim45	ENSMUST00000037409	protein_coding	principal3	3	1	100922475	4612
ENSMUSG00000028549	protein_coding	Itgb3bp	ENSMUST00000123830	processed_transcript		4	-1	99929813	3387
ENSMUSG00000069755	transcribed_unprocessed_pseudogene	Zfp125	ENSMUST00000144811	processed_transcript		12	-1	20921262	704
ENSMUSG00000069755	transcribed_unprocessed_pseudogene	Zfp125	ENSMUST00000079237	transcribed_unprocessed_pseudogene		12	-1	20902659	2488
ENSMUSG00000026965	protein_coding	Anapc2	ENSMUST00000129265	processed_transcript		2	1	25272595	1332
ENSMUSG00000069755	transcribed_unprocessed_pseudogene	Zfp125	ENSMUST00000208744	processed_transcript		12	-1	20921262	928
ENSMUSG00000026965	protein_coding	Anapc2	ENSMUST00000129300	protein_coding		2	1	25273478	555
ENSMUSG00000052142	protein_coding	Rasal3	ENSMUST00000135560	retained_intron		17	-1	32403581	1156
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000090632	protein_coding		6	1	11925915	3985
ENSMUSG00000036521	protein_coding	Scgb2b2	ENSMUST00000205821	protein_coding		7	1	31290508	357
ENSMUSG00000028549	protein_coding	Itgb3bp	ENSMUST00000102786	processed_transcript		4	-1	99829092	716
ENSMUSG00000028549	protein_coding	Itgb3bp	ENSMUST00000123045	processed_transcript		4	-1	99829134	720
ENSMUSG00000108660	antisense	Gm21284	ENSMUST00000205532	antisense		6	1	83568039	3736
ENSMUSG00000026965	protein_coding	Anapc2	ENSMUST00000125885	processed_transcript		2	1	25278993	572
ENSMUSG00000028549	protein_coding	Itgb3bp	ENSMUST00000146739	processed_transcript		4	-1	99829090	346
ENSMUSG00000093978	processed_pseudogene	Gm12612	ENSMUST00000140182	processed_pseudogene		11	-1	60671125	1986
ENSMUSG00000095816	unprocessed_pseudogene	Vmn1r-ps70	ENSMUST00000173675	unprocessed_pseudogene		7	-1	22353397	963
ENSMUSG00000085642	transcribed_unprocessed_pseudogene	3110053B16Rik	ENSMUST00000145605	transcribed_unprocessed_pseudogene		12	-1	20877071	575
ENSMUSG00000073791	protein_coding	Efcab7	ENSMUST00000143994	protein_coding		4	1	99829198	448
ENSMUSG00000095136	unprocessed_pseudogene	Gm12616	ENSMUST00000118594	unprocessed_pseudogene		11	-1	60680088	382
ENSMUSG00000073791	protein_coding	Efcab7	ENSMUST00000124547	protein_coding		4	1	99829440	306
ENSMUSG00000085642	transcribed_unprocessed_pseudogene	3110053B16Rik	ENSMUST00000140360	processed_transcript		12	-1	20921262	2004
ENSMUSG00000093917	protein_coding	Vmn1r254	ENSMUST00000105187	protein_coding	principal1	7	-1	22371039	918
ENSMUSG00000000605	protein_coding	Clcn4	ENSMUST00000000619	protein_coding	principal3	7	-1	7299533	4607
ENSMUSG00000033233	protein_coding	Trim45	ENSMUST00000106980	protein_coding	principal3	3	1	100922493	3337
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000115511	protein_coding	principal1	6	1	11925916	3336
ENSMUSG00000073791	protein_coding	Efcab7	ENSMUST00000106994	protein_coding		4	1	99829500	243
ENSMUSG00000085642	transcribed_unprocessed_pseudogene	3110053B16Rik	ENSMUST00000143905	processed_transcript		12	-1	20921053	881
ENSMUSG00000036521	protein_coding	Scgb2b2	ENSMUST00000038835	protein_coding	principal1	7	1	31302761	520
ENSMUSG00000085642	transcribed_unprocessed_pseudogene	3110053B16Rik	ENSMUST00000127917	processed_transcript		12	-1	20921228	676
ENSMUSG00000091438	antisense	Gm17088	ENSMUST00000164616	antisense		6	-1	134172007	581
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000133776	protein_coding		6	1	11926783	727
ENSMUSG00000108263	TEC	1700051K13Rik	ENSMUST00000204426	TEC		6	-1	134246366	696
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000203222	retained_intron		6	1	11987064	1592
ENSMUSG00000000605	protein_coding	Clcn4	ENSMUST00000210061	protein_coding	alternative2	7	-1	7298806	2445
ENSMUSG00000108214	TEC	Gm43982	ENSMUST00000204995	TEC		6	1	134073354	1829
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000204565	retained_intron		6	1	11990872	4438
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000203045	nonsense_mediated_decay		6	1	12006820	566
ENSMUSG00000073791	protein_coding	Efcab7	ENSMUST00000136874	protein_coding		4	1	99878088	1579
ENSMUSG00000033233	protein_coding	Trim45	ENSMUST00000134993	protein_coding	alternative2	3	1	100922912	2274
ENSMUSG00000073791	protein_coding	Efcab7	ENSMUST00000097959	protein_coding	principal1	4	1	99831394	1713
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000204150	retained_intron		6	1	12041518	5905
ENSMUSG00000062556	protein_coding	Scgb1b2	ENSMUST00000080635	protein_coding	principal1	7	-1	31291821	424
ENSMUSG00000092346	antisense	Tlx1os	ENSMUST00000173437	antisense		19	-1	45159304	620
ENSMUSG00000108040	TEC	Gm43900	ENSMUST00000204868	TEC		6	1	80827138	2669
ENSMUSG00000029629	protein_coding	Phf14	ENSMUST00000214543	processed_transcript		6	1	12044379	462
ENSMUSG00000107691	processed_pseudogene	Gm43901	ENSMUST00000203247	processed_pseudogene		6	-1	81421258	453
ENSMUSG00000000605	protein_coding	Clcn4	ENSMUST00000210444	retained_intron		7	-1	7298769	3865
ENSMUSG00000078754	protein_coding	Scgb2b3	ENSMUST00000108090	protein_coding	principal1	7	-1	31362072	339
ENSMUSG00000057455	protein_coding	Rit2	ENSMUST00000153060	protein_coding	principal1	18	-1	31317133	1806
ENSMUSG00000040711	protein_coding	Sh3pxd2b	ENSMUST00000038753	protein_coding	principal2	11	1	32347820	7413
ENSMUSG00000025215	protein_coding	Tlx1	ENSMUST00000026236	protein_coding	principal1	19	1	45150680	2065
ENSMUSG00000040711	protein_coding	Sh3pxd2b	ENSMUST00000239041	protein_coding	alternative2	11	1	32347820	7497
ENSMUSG00000057455	protein_coding	Rit2	ENSMUST00000139924	protein_coding		18	-1	31317111	1674
ENSMUSG00000028799	protein_coding	Zfp362	ENSMUST00000106072	protein_coding	principal1	4	-1	128806045	2812
ENSMUSG00000000605	protein_coding	Clcn4	ENSMUST00000210594	protein_coding	alternative2	7	-1	7299262	2539
ENSMUSG00000107419	lincRNA	Gm38839	ENSMUST00000203833	lincRNA		6	-1	81715232	633
ENSMUSG00000025215	protein_coding	Tlx1	ENSMUST00000174617	protein_coding		19	1	45151469	806
ENSMUSG00000028799	protein_coding	Zfp362	ENSMUST00000170934	protein_coding		4	-1	128806045	1136
ENSMUSG00000057455	protein_coding	Rit2	ENSMUST00000082070	nonsense_mediated_decay		18	-1	31317290	2715
ENSMUSG00000028799	protein_coding	Zfp362	ENSMUST00000138371	processed_transcript		4	-1	128790092	469
ENSMUSG00000057455	protein_coding	Rit2	ENSMUST00000153196	processed_transcript		18	-1	31212732	701
ENSMUSG00000078572	protein_coding	Ndufaf8	ENSMUST00000106223	protein_coding	principal1	11	1	120098928	781
ENSMUSG00000040711	protein_coding	Sh3pxd2b	ENSMUST00000138771	retained_intron		11	1	32347840	2659
ENSMUSG00000074457	protein_coding	S100a16	ENSMUST00000098911	protein_coding	principal1	3	1	90537254	1127
ENSMUSG00000024842	protein_coding	Cabp4	ENSMUST00000236071	retained_intron		19	-1	4139563	2719
ENSMUSG00000028799	protein_coding	Zfp362	ENSMUST00000071108	protein_coding	principal1	4	-1	128794888	2674
ENSMUSG00000117502	processed_pseudogene	Gm7941	ENSMUST00000234093	processed_pseudogene		18	-1	31350204	681
ENSMUSG00000114309	bidirectional_promoter_lncRNA	Gm48295	ENSMUST00000223632	bidirectional_promoter_lncRNA		13	-1	58157575	1142
ENSMUSG00000078572	protein_coding	Ndufaf8	ENSMUST00000185558	protein_coding		11	1	120098944	427
ENSMUSG00000107735	processed_pseudogene	Gm44173	ENSMUST00000204316	processed_pseudogene		6	-1	121915100	132
ENSMUSG00000000605	protein_coding	Clcn4	ENSMUST00000211574	nonsense_mediated_decay		7	-1	7298798	2170
ENSMUSG00000078572	protein_coding	Ndufaf8	ENSMUST00000186913	retained_intron		11	1	120099099	401
ENSMUSG00000074457	protein_coding	S100a16	ENSMUST00000107335	protein_coding	principal1	3	1	90537315	926
ENSMUSG00000080798	processed_pseudogene	Gm5135	ENSMUST00000121100	processed_pseudogene		X	-1	41923827	573
ENSMUSG00000000605	protein_coding	Clcn4	ENSMUST00000210362	protein_coding		7	-1	7296844	419
ENSMUSG00000096934	antisense	Gm26658	ENSMUST00000181067	antisense		18	1	31440318	2500
ENSMUSG00000074457	protein_coding	S100a16	ENSMUST00000127008	processed_transcript		3	1	90537325	464
ENSMUSG00000000605	protein_coding	Clcn4	ENSMUST00000211551	retained_intron		7	-1	7298746	2391
ENSMUSG00000092304	unprocessed_pseudogene	Gm20530	ENSMUST00000174261	unprocessed_pseudogene		17	1	36094181	254
ENSMUSG00000074457	protein_coding	S100a16	ENSMUST00000107334	protein_coding	principal1	3	1	90538885	879
ENSMUSG00000030693	protein_coding	Klk10	ENSMUST00000014058	protein_coding	principal1	7	1	43781035	1373
ENSMUSG00000074457	protein_coding	S100a16	ENSMUST00000150833	protein_coding		3	1	90539288	422
ENSMUSG00000000605	protein_coding	Clcn4	ENSMUST00000209916	nonsense_mediated_decay		7	-1	7298771	447
ENSMUSG00000074457	protein_coding	S100a16	ENSMUST00000107333	protein_coding	principal1	3	1	90541146	608
ENSMUSG00000024842	protein_coding	Cabp4	ENSMUST00000025761	protein_coding	principal1	19	-1	4139609	1433
ENSMUSG00000000605	protein_coding	Clcn4	ENSMUST00000210989	processed_transcript		7	-1	7299557	658
ENSMUSG00000097178	processed_transcript	2310002F09Rik	ENSMUST00000181454	antisense		7	-1	43797945	1607
ENSMUSG00000074457	protein_coding	S100a16	ENSMUST00000107331	protein_coding	principal1	3	1	90541149	723
ENSMUSG00000000605	protein_coding	Clcn4	ENSMUST00000210809	processed_transcript		7	-1	7300851	542
ENSMUSG00000108083	unprocessed_pseudogene	Mug4-ps	ENSMUST00000203118	unprocessed_pseudogene		6	1	121916430	3578
ENSMUSG00000097178	processed_transcript	2310002F09Rik	ENSMUST00000181551	antisense		7	-1	43748793	2468
ENSMUSG00000024261	protein_coding	Syt4	ENSMUST00000025110	protein_coding	principal1	18	-1	31447406	3892
ENSMUSG00000097178	processed_transcript	2310002F09Rik	ENSMUST00000206747	TEC		7	-1	43758584	605
ENSMUSG00000024842	protein_coding	Cabp4	ENSMUST00000236026	retained_intron		19	-1	4144033	3372
ENSMUSG00000096518	unprocessed_pseudogene	Gm21894	ENSMUST00000179631	unprocessed_pseudogene		Y	1	54656882	546
ENSMUSG00000097178	processed_transcript	2310002F09Rik	ENSMUST00000205527	antisense		7	-1	43797958	624
ENSMUSG00000085701	lincRNA	Gm12968	ENSMUST00000138291	lincRNA		4	1	128846197	1454
ENSMUSG00000099509	unprocessed_pseudogene	Gm29307	ENSMUST00000187367	unprocessed_pseudogene		Y	-1	54742680	696
ENSMUSG00000084011	processed_pseudogene	Gm12969	ENSMUST00000120199	processed_pseudogene		4	-1	128869396	1004
ENSMUSG00000104137	TEC	Gm36954	ENSMUST00000195362	TEC		11	-1	9705623	363
ENSMUSG00000021339	protein_coding	Mrs2	ENSMUST00000021772	protein_coding	principal1	13	-1	25020379	7035
ENSMUSG00000074457	protein_coding	S100a16	ENSMUST00000098910	protein_coding	principal1	3	1	90541161	1123
ENSMUSG00000024842	protein_coding	Cabp4	ENSMUST00000236648	retained_intron		19	-1	4139326	725
ENSMUSG00000081629	processed_pseudogene	Eif3s6-ps1	ENSMUST00000117907	processed_pseudogene		11	-1	9737621	470
ENSMUSG00000021339	protein_coding	Mrs2	ENSMUST00000225296	retained_intron		13	-1	24994799	243
ENSMUSG00000039485	protein_coding	Tspyl4	ENSMUST00000047935	protein_coding	principal1	10	1	34297442	3879
ENSMUSG00000117576	processed_pseudogene	Gm5241	ENSMUST00000234311	processed_pseudogene		18	-1	31520762	1064
ENSMUSG00000021339	protein_coding	Mrs2	ENSMUST00000224170	retained_intron		13	-1	25001800	436
ENSMUSG00000042349	protein_coding	Ikbke	ENSMUST00000062108	protein_coding	principal1	1	-1	131279606	3251
ENSMUSG00000021339	protein_coding	Mrs2	ENSMUST00000224894	processed_transcript		13	-1	25019776	759
ENSMUSG00000084861	lincRNA	1700095J07Rik	ENSMUST00000128017	lincRNA		6	1	30304605	1405
ENSMUSG00000044724	protein_coding	Gpr152	ENSMUST00000096338	protein_coding	principal1	19	1	4139787	3936
ENSMUSG00000084861	lincRNA	1700095J07Rik	ENSMUST00000140275	lincRNA		6	1	30304621	573
ENSMUSG00000042349	protein_coding	Ikbke	ENSMUST00000161764	protein_coding		1	-1	131276951	2867
ENSMUSG00000082312	processed_pseudogene	Gm11996	ENSMUST00000117538	processed_pseudogene		11	1	10239337	915
ENSMUSG00000039485	protein_coding	Tspyl4	ENSMUST00000213791	processed_transcript		10	1	34299256	560
ENSMUSG00000087088	antisense	Gm16638	ENSMUST00000148687	antisense		7	-1	83631842	1865
ENSMUSG00000084045	processed_pseudogene	Gm11997	ENSMUST00000118697	processed_pseudogene		11	-1	10377082	313
ENSMUSG00000112817	processed_pseudogene	Gm48122	ENSMUST00000219162	processed_pseudogene		12	-1	4077624	222
ENSMUSG00000087088	antisense	Gm16638	ENSMUST00000208892	antisense		7	-1	83631880	8508
ENSMUSG00000027423	protein_coding	Snx5	ENSMUST00000153033	processed_transcript		2	-1	144260762	1296
ENSMUSG00000110791	TEC	Gm47508	ENSMUST00000213462	TEC		10	1	34293558	3016
ENSMUSG00000021094	protein_coding	Dhrs7	ENSMUST00000221750	protein_coding		12	-1	72664754	1308
ENSMUSG00000042349	protein_coding	Ikbke	ENSMUST00000160748	retained_intron		1	-1	131266288	911
ENSMUSG00000039232	protein_coding	Stx11	ENSMUST00000042861	protein_coding	principal1	10	-1	12964262	4173
ENSMUSG00000042349	protein_coding	Ikbke	ENSMUST00000163029	retained_intron		1	-1	131270544	741
ENSMUSG00000047884	protein_coding	Klk9	ENSMUST00000005891	protein_coding	principal1	7	1	43791891	1476
ENSMUSG00000042349	protein_coding	Ikbke	ENSMUST00000162285	retained_intron		1	-1	131272541	797
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000023221	protein_coding	principal1	15	1	76331231	2107
ENSMUSG00000042349	protein_coding	Ikbke	ENSMUST00000159195	protein_coding		1	-1	131276713	549
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000239009	protein_coding		2	1	67173834	3347
ENSMUSG00000037938	protein_coding	Chchd5	ENSMUST00000035481	protein_coding	principal1	2	1	129129700	1325
ENSMUSG00000039232	protein_coding	Stx11	ENSMUST00000163425	protein_coding	principal1	10	-1	12964259	4032
ENSMUSG00000021094	protein_coding	Dhrs7	ENSMUST00000021512	protein_coding	principal1	12	-1	72664909	1385
ENSMUSG00000037938	protein_coding	Chchd5	ENSMUST00000149118	processed_transcript		2	1	129129804	793
ENSMUSG00000021094	protein_coding	Dhrs7	ENSMUST00000220821	nonsense_mediated_decay		12	-1	72664806	1118
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000067760	protein_coding		15	1	9071260	3731
ENSMUSG00000037938	protein_coding	Chchd5	ENSMUST00000137881	retained_intron		2	1	129129850	923
ENSMUSG00000038540	protein_coding	Tmc3	ENSMUST00000163297	retained_intron		7	1	83584927	3621
ENSMUSG00000039232	protein_coding	Stx11	ENSMUST00000218685	protein_coding		10	-1	12964298	441
ENSMUSG00000021094	protein_coding	Dhrs7	ENSMUST00000221674	retained_intron		12	-1	72664780	2230
ENSMUSG00000038540	protein_coding	Tmc3	ENSMUST00000165388	retained_intron		7	1	83584931	1621
ENSMUSG00000108202	processed_pseudogene	Gm4874	ENSMUST00000203589	processed_pseudogene		6	-1	81841364	691
ENSMUSG00000039232	protein_coding	Stx11	ENSMUST00000219727	protein_coding		10	-1	12964258	435
ENSMUSG00000110936	processed_pseudogene	Gm19212	ENSMUST00000216642	processed_pseudogene		9	-1	7689836	862
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000100789	protein_coding	principal1	15	1	9071260	3578
ENSMUSG00000022253	protein_coding	Nadk2	ENSMUST00000100790	protein_coding		15	1	9071260	3665
ENSMUSG00000055632	protein_coding	Hmcn2	ENSMUST00000113532	protein_coding	principal1	2	1	31314415	15646
ENSMUSG00000100424	lincRNA	Gm29557	ENSMUST00000188245	lincRNA		Y	1	54819758	370
ENSMUSG00000095257	protein_coding	Scgb1b3	ENSMUST00000179481	protein_coding	principal1	7	1	31375592	419
ENSMUSG00000096156	processed_pseudogene	Gm9242	ENSMUST00000177820	processed_pseudogene		16	1	97490047	1074
ENSMUSG00000114657	processed_pseudogene	Gm47764	ENSMUST00000224770	processed_pseudogene		14	1	7074598	573
ENSMUSG00000039480	protein_coding	Nt5dc1	ENSMUST00000129363	protein_coding		10	-1	34313683	539
ENSMUSG00000101490	unprocessed_pseudogene	Gm20927	ENSMUST00000186168	unprocessed_pseudogene		Y	-1	54969437	696
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000239102	protein_coding	alternative2	8	1	3353437	6574
ENSMUSG00000030199	protein_coding	Etv6	ENSMUST00000081028	protein_coding	principal1	6	1	134035700	5545
ENSMUSG00000078348	protein_coding	Sf3b5	ENSMUST00000105139	protein_coding	principal1	10	1	13005343	3841
ENSMUSG00000079563	protein_coding	Pglyrp2	ENSMUST00000236386	protein_coding	principal2	17	-1	32424167	2817
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000208845	processed_transcript		8	1	3353460	1066
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000238813	protein_coding		8	1	3360852	2741
ENSMUSG00000092167	protein_coding	Gm3696	ENSMUST00000167923	protein_coding	principal1	14	-1	7100621	1814
ENSMUSG00000092167	protein_coding	Gm3696	ENSMUST00000179898	protein_coding	principal1	14	-1	7090812	612
ENSMUSG00000099993	unprocessed_pseudogene	Gm20930	ENSMUST00000186998	unprocessed_pseudogene		Y	-1	55044004	696
ENSMUSG00000112498	lincRNA	Gm47691	ENSMUST00000219965	lincRNA		10	-1	13051385	1618
ENSMUSG00000030199	protein_coding	Etv6	ENSMUST00000111963	protein_coding		6	1	134035700	5707
ENSMUSG00000064023	protein_coding	Klk8	ENSMUST00000085461	protein_coding	principal1	7	1	43797577	1322
ENSMUSG00000030199	protein_coding	Etv6	ENSMUST00000164648	protein_coding		6	1	134035969	611
ENSMUSG00000030199	protein_coding	Etv6	ENSMUST00000169529	retained_intron		6	1	134233600	915
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000238912	protein_coding		2	1	67173834	12612
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000131773	retained_intron		8	1	3393006	3843
ENSMUSG00000064023	protein_coding	Klk8	ENSMUST00000205537	protein_coding		7	1	43797596	745
ENSMUSG00000030199	protein_coding	Etv6	ENSMUST00000145869	processed_transcript		6	1	134247565	373
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000164972	nonsense_mediated_decay		15	1	76331344	2237
ENSMUSG00000020456	protein_coding	Ogdh	ENSMUST00000003461	protein_coding	principal3	11	1	6291633	4127
ENSMUSG00000064023	protein_coding	Klk8	ENSMUST00000206465	retained_intron		7	1	43801866	561
ENSMUSG00000037552	protein_coding	Plekhg2	ENSMUST00000094644	protein_coding	principal3	7	-1	28372233	4623
ENSMUSG00000108238	TEC	Gm43984	ENSMUST00000204572	TEC		6	1	134084601	2864
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000172281	protein_coding		15	1	76331345	1809
ENSMUSG00000108588	TEC	Gm44814	ENSMUST00000207018	TEC		7	1	43715990	434
ENSMUSG00000018620	protein_coding	Mmp20	ENSMUST00000034487	protein_coding	principal1	9	1	7628231	3287
ENSMUSG00000092134	antisense	Gm17089	ENSMUST00000171098	antisense		6	-1	134243711	1394
ENSMUSG00000060212	protein_coding	Pcnx2	ENSMUST00000047239	protein_coding	principal1	8	-1	125898317	7236
ENSMUSG00000002550	protein_coding	Uck1	ENSMUST00000002625	protein_coding	principal1	2	-1	32260159	2005
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000163798	retained_intron		15	1	76331350	871
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000004684	protein_coding	principal2	8	1	3393038	5271
ENSMUSG00000059173	protein_coding	Pde1a	ENSMUST00000102655	protein_coding	principal4	2	-1	80128939	4258
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000169378	protein_coding		15	1	76331513	678
ENSMUSG00000037552	protein_coding	Plekhg2	ENSMUST00000129145	retained_intron		7	-1	28363341	3074
ENSMUSG00000086381	antisense	AV064505	ENSMUST00000124572	antisense		9	-1	7695631	522
ENSMUSG00000059173	protein_coding	Pde1a	ENSMUST00000183775	nonsense_mediated_decay		2	-1	80128939	4178
ENSMUSG00000060212	protein_coding	Pcnx2	ENSMUST00000120589	retained_intron		8	-1	125839850	4147
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000170121	nonsense_mediated_decay		15	1	76331999	474
ENSMUSG00000002550	protein_coding	Uck1	ENSMUST00000133804	retained_intron		2	-1	32256669	983
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000130587	processed_transcript		8	1	3393073	354
ENSMUSG00000060212	protein_coding	Pcnx2	ENSMUST00000119305	retained_intron		8	-1	125774128	2776
ENSMUSG00000069796	lincRNA	Gm11426	ENSMUST00000125600	lincRNA		11	1	82633353	2220
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000145394	protein_coding		8	1	3393073	548
ENSMUSG00000087175	antisense	Gm15133	ENSMUST00000152031	antisense		7	1	104315019	517
ENSMUSG00000060212	protein_coding	Pcnx2	ENSMUST00000189197	retained_intron		8	-1	125829033	1871
ENSMUSG00000002550	protein_coding	Uck1	ENSMUST00000138133	protein_coding		2	-1	32259644	798
ENSMUSG00000041644	protein_coding	Slc5a12	ENSMUST00000111026	protein_coding	principal1	2	1	110597307	3518
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000238786	protein_coding	alternative2	8	1	3426700	3794
ENSMUSG00000060212	protein_coding	Pcnx2	ENSMUST00000131127	protein_coding		8	-1	125898317	3782
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000164680	retained_intron		15	1	76332223	924
ENSMUSG00000087175	antisense	Gm15133	ENSMUST00000139019	antisense		7	1	104315020	843
ENSMUSG00000002550	protein_coding	Uck1	ENSMUST00000142797	retained_intron		2	-1	32259633	632
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000230818	retained_intron		15	1	76332288	840
ENSMUSG00000044737	protein_coding	Klk14	ENSMUST00000056329	protein_coding	principal1	7	1	43690418	1271
ENSMUSG00000059173	protein_coding	Pde1a	ENSMUST00000102653	protein_coding	principal4	2	-1	80129458	2439
ENSMUSG00000060212	protein_coding	Pcnx2	ENSMUST00000187772	processed_transcript		8	-1	125898275	417
ENSMUSG00000002550	protein_coding	Uck1	ENSMUST00000134351	retained_intron		2	-1	32260061	793
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000168948	processed_transcript		15	1	76332527	392
ENSMUSG00000020456	protein_coding	Ogdh	ENSMUST00000093350	protein_coding	alternative1	11	1	6291668	4075
ENSMUSG00000100812	antisense	A730098A19Rik	ENSMUST00000188193	antisense		8	1	125897914	978
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000230683	retained_intron		15	1	76332928	701
ENSMUSG00000029576	protein_coding	Radil	ENSMUST00000063635	protein_coding	principal3	5	-1	142551098	3700
ENSMUSG00000041644	protein_coding	Slc5a12	ENSMUST00000045972	protein_coding		2	1	110597298	3529
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000171005	retained_intron		15	1	76333169	650
ENSMUSG00000066258	protein_coding	Trim12a	ENSMUST00000142641	processed_transcript		7	-1	104301034	562
ENSMUSG00000020456	protein_coding	Ogdh	ENSMUST00000081894	protein_coding	alternative1	11	1	6292605	4114
ENSMUSG00000022561	protein_coding	Gpaa1	ENSMUST00000165179	retained_intron		15	1	76333731	360
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000156085	retained_intron		8	1	3437011	5277
ENSMUSG00000047594	protein_coding	Olfr1122	ENSMUST00000215371	protein_coding	principal1	2	1	87385849	5036
ENSMUSG00000004568	protein_coding	Arhgef18	ENSMUST00000145360	retained_intron		8	1	3450758	1168
ENSMUSG00000047594	protein_coding	Olfr1122	ENSMUST00000056435	protein_coding	principal1	2	1	87387656	1080
ENSMUSG00000029576	protein_coding	Radil	ENSMUST00000085758	protein_coding	alternative2	5	-1	142545028	3714
ENSMUSG00000079563	protein_coding	Pglyrp2	ENSMUST00000170392	protein_coding	principal2	17	-1	32420975	1807
ENSMUSG00000018623	protein_coding	Mmp7	ENSMUST00000018767	protein_coding	principal1	9	1	7692090	1068
ENSMUSG00000055632	protein_coding	Hmcn2	ENSMUST00000226996	nonsense_mediated_decay		2	1	31314415	15612
ENSMUSG00000082028	processed_pseudogene	Gm1826	ENSMUST00000118646	processed_pseudogene		2	1	87393483	1162
ENSMUSG00000055632	protein_coding	Hmcn2	ENSMUST00000130375	protein_coding		2	1	31400277	709
ENSMUSG00000079563	protein_coding	Pglyrp2	ENSMUST00000237082	nonsense_mediated_decay		17	-1	32420975	1680
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000239121	processed_transcript		2	1	67194756	2935
ENSMUSG00000022938	protein_coding	Fam3b	ENSMUST00000049721	protein_coding	principal1	16	-1	97504936	972
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000238989	processed_transcript		2	1	67194756	2860
ENSMUSG00000041644	protein_coding	Slc5a12	ENSMUST00000146664	processed_transcript		2	1	110605724	1693
ENSMUSG00000046694	protein_coding	Tent5b	ENSMUST00000051676	protein_coding	principal1	4	1	133480132	2287
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000239053	processed_transcript		2	1	67194756	2908
ENSMUSG00000055632	protein_coding	Hmcn2	ENSMUST00000138821	retained_intron		2	1	31438062	2879
ENSMUSG00000041644	protein_coding	Slc5a12	ENSMUST00000138497	retained_intron		2	1	110597419	1527
ENSMUSG00000020456	protein_coding	Ogdh	ENSMUST00000101554	protein_coding	principal3	11	1	6291666	4106
ENSMUSG00000037552	protein_coding	Plekhg2	ENSMUST00000121085	protein_coding	alternative2	7	-1	28371574	4649
ENSMUSG00000055632	protein_coding	Hmcn2	ENSMUST00000142448	processed_transcript		2	1	31446735	2495
ENSMUSG00000089999	transcribed_processed_pseudogene	Gm6485	ENSMUST00000160676	transcribed_processed_pseudogene		3	-1	104753165	439
ENSMUSG00000041644	protein_coding	Slc5a12	ENSMUST00000127822	processed_transcript		2	1	110597724	527
ENSMUSG00000079563	protein_coding	Pglyrp2	ENSMUST00000237165	protein_coding		17	-1	32420975	1469
ENSMUSG00000022938	protein_coding	Fam3b	ENSMUST00000125475	retained_intron		16	-1	97476307	880
ENSMUSG00000022938	protein_coding	Fam3b	ENSMUST00000231641	protein_coding		16	-1	97514816	867
ENSMUSG00000059173	protein_coding	Pde1a	ENSMUST00000090756	protein_coding		2	-1	79908399	1661
ENSMUSG00000022938	protein_coding	Fam3b	ENSMUST00000231999	protein_coding		16	-1	97504970	737
ENSMUSG00000022938	protein_coding	Fam3b	ENSMUST00000231414	protein_coding		16	-1	97512530	806
ENSMUSG00000055632	protein_coding	Hmcn2	ENSMUST00000141294	retained_intron		2	1	31454708	741
ENSMUSG00000086850	antisense	Gm13257	ENSMUST00000132840	antisense		4	-1	133482526	665
ENSMUSG00000037552	protein_coding	Plekhg2	ENSMUST00000119990	protein_coding	alternative2	7	-1	28372494	4880
ENSMUSG00000106577	lincRNA	Gm31026	ENSMUST00000198762	lincRNA		3	1	53924835	821
ENSMUSG00000022938	protein_coding	Fam3b	ENSMUST00000232018	protein_coding		16	-1	97514773	939
ENSMUSG00000020456	protein_coding	Ogdh	ENSMUST00000140765	protein_coding		11	1	6291985	702
ENSMUSG00000029576	protein_coding	Radil	ENSMUST00000139824	retained_intron		5	-1	142551062	3963
ENSMUSG00000020456	protein_coding	Ogdh	ENSMUST00000135124	protein_coding		11	1	6292172	621
ENSMUSG00000094566	processed_pseudogene	Gm12620	ENSMUST00000119791	processed_pseudogene		11	-1	60684164	1986
ENSMUSG00000079563	protein_coding	Pglyrp2	ENSMUST00000237130	protein_coding		17	-1	32424093	1543
ENSMUSG00000084034	processed_pseudogene	Gm12617	ENSMUST00000121268	processed_pseudogene		11	-1	60693075	381
ENSMUSG00000029576	protein_coding	Radil	ENSMUST00000110784	protein_coding		5	-1	142509659	3106
ENSMUSG00000079563	protein_coding	Pglyrp2	ENSMUST00000235892	protein_coding	alternative2	17	-1	32420975	1653
ENSMUSG00000020456	protein_coding	Ogdh	ENSMUST00000125929	retained_intron		11	1	6291641	779
ENSMUSG00000029576	protein_coding	Radil	ENSMUST00000110785	protein_coding	alternative2	5	-1	142551077	3708
ENSMUSG00000079563	protein_coding	Pglyrp2	ENSMUST00000114455	protein_coding		17	-1	32420975	1765
ENSMUSG00000015202	protein_coding	Cnksr3	ENSMUST00000015346	protein_coding	principal1	10	-1	7212237	3447
ENSMUSG00000079563	protein_coding	Pglyrp2	ENSMUST00000236703	retained_intron		17	-1	32424167	1863
ENSMUSG00000025016	protein_coding	Tm9sf3	ENSMUST00000025989	protein_coding		19	-1	41263997	8096
ENSMUSG00000117872	antisense	A530088E08Rik	ENSMUST00000237668	antisense		17	1	32396778	1314
ENSMUSG00000029576	protein_coding	Radil	ENSMUST00000150380	retained_intron		5	-1	142487569	747
ENSMUSG00000117872	antisense	A530088E08Rik	ENSMUST00000235566	antisense		17	1	32396825	1451
ENSMUSG00000066258	protein_coding	Trim12a	ENSMUST00000106837	protein_coding	alternative2	7	-1	104315455	1389
ENSMUSG00000099374	unprocessed_pseudogene	Gm21344	ENSMUST00000186754	unprocessed_pseudogene		Y	-1	82787743	693
ENSMUSG00000094018	protein_coding	S100a2	ENSMUST00000238700	processed_transcript		3	1	90560363	1156
ENSMUSG00000059173	protein_coding	Pde1a	ENSMUST00000102652	protein_coding		2	-1	79908433	1646
ENSMUSG00000015202	protein_coding	Cnksr3	ENSMUST00000150282	protein_coding		10	-1	7135506	2554
ENSMUSG00000117872	antisense	A530088E08Rik	ENSMUST00000236795	antisense		17	1	32396898	1805
ENSMUSG00000094018	protein_coding	S100a2	ENSMUST00000199225	processed_transcript		3	1	90560578	3143
ENSMUSG00000117872	antisense	A530088E08Rik	ENSMUST00000236003	antisense		17	1	32403014	419
ENSMUSG00000094018	protein_coding	S100a2	ENSMUST00000238223	transcribed_unitary_pseudogene		3	1	90590214	294
ENSMUSG00000100882	unprocessed_pseudogene	Gm20849	ENSMUST00000189065	unprocessed_pseudogene		Y	-1	82862028	696
ENSMUSG00000094018	protein_coding	S100a2	ENSMUST00000238373	processed_transcript		3	1	90591061	468
ENSMUSG00000117872	antisense	A530088E08Rik	ENSMUST00000238175	antisense		17	1	32403006	1693
ENSMUSG00000101772	unprocessed_pseudogene	Gm28829	ENSMUST00000186231	unprocessed_pseudogene		Y	-1	82891600	615
ENSMUSG00000059173	protein_coding	Pde1a	ENSMUST00000102651	protein_coding	alternative2	2	-1	79908433	1673
ENSMUSG00000029576	protein_coding	Radil	ENSMUST00000139278	protein_coding		5	-1	142509494	330
ENSMUSG00000037552	protein_coding	Plekhg2	ENSMUST00000128015	retained_intron		7	-1	28372577	5511
ENSMUSG00000094018	protein_coding	S100a2	ENSMUST00000179550	protein_coding	principal1	3	1	90590247	315
ENSMUSG00000066258	protein_coding	Trim12a	ENSMUST00000106839	protein_coding	principal2	7	-1	104315456	1486
ENSMUSG00000103813	lincRNA	Gm31422	ENSMUST00000195198	lincRNA		Y	-1	25816026	1495
ENSMUSG00000104509	lincRNA	Gm33994	ENSMUST00000193724	lincRNA		1	-1	136579477	2414
ENSMUSG00000029576	protein_coding	Radil	ENSMUST00000129212	protein_coding		5	-1	142550965	426
ENSMUSG00000099667	unprocessed_pseudogene	Gm21901	ENSMUST00000189568	unprocessed_pseudogene		Y	-1	82928433	696
ENSMUSG00000025016	protein_coding	Tm9sf3	ENSMUST00000237871	protein_coding	principal1	19	-1	41263980	3170
ENSMUSG00000104366	lincRNA	4933409D19Rik	ENSMUST00000193674	lincRNA		1	-1	136605468	1557
ENSMUSG00000059173	protein_coding	Pde1a	ENSMUST00000134739	protein_coding		2	-1	79927791	1426
ENSMUSG00000037552	protein_coding	Plekhg2	ENSMUST00000144700	protein_coding		7	-1	28372599	3721
ENSMUSG00000066258	protein_coding	Trim12a	ENSMUST00000070943	protein_coding		7	-1	104315463	1531
ENSMUSG00000103813	lincRNA	Gm31422	ENSMUST00000191974	lincRNA		Y	-1	25815574	619
ENSMUSG00000037552	protein_coding	Plekhg2	ENSMUST00000147767	retained_intron		7	-1	28365492	661
ENSMUSG00000097229	lincRNA	Platr23	ENSMUST00000180797	lincRNA		1	-1	136624650	2439
ENSMUSG00000103813	lincRNA	Gm31422	ENSMUST00000192897	lincRNA		Y	-1	25815574	435
ENSMUSG00000055865	protein_coding	Tafa3	ENSMUST00000139783	protein_coding	principal1	3	-1	104777547	4316
ENSMUSG00000101325	unprocessed_pseudogene	Scgb2b4-ps	ENSMUST00000186705	unprocessed_pseudogene		7	-1	31403176	340
ENSMUSG00000030235	protein_coding	Slco1c1	ENSMUST00000204998	nonsense_mediated_decay		6	1	141524368	2427
ENSMUSG00000037552	protein_coding	Plekhg2	ENSMUST00000147362	protein_coding		7	-1	28371727	729
ENSMUSG00000059173	protein_coding	Pde1a	ENSMUST00000146076	processed_transcript		2	-1	80039029	869
ENSMUSG00000066258	protein_coding	Trim12a	ENSMUST00000126145	processed_transcript		7	-1	104315343	407
ENSMUSG00000107817	unprocessed_pseudogene	Gm38840	ENSMUST00000204716	unprocessed_pseudogene		6	-1	81875864	843
ENSMUSG00000001021	protein_coding	S100a3	ENSMUST00000200508	protein_coding	principal1	3	1	90584659	587
ENSMUSG00000042804	protein_coding	Gpr153	ENSMUST00000105650	protein_coding	alternative2	4	1	152274232	3838
ENSMUSG00000059173	protein_coding	Pde1a	ENSMUST00000125887	processed_transcript		2	-1	80129458	1029
ENSMUSG00000055865	protein_coding	Tafa3	ENSMUST00000162644	processed_transcript		3	-1	104781840	355
ENSMUSG00000100358	unprocessed_pseudogene	Scgb1b4-ps	ENSMUST00000186920	unprocessed_pseudogene		7	1	31409675	271
ENSMUSG00000001021	protein_coding	S100a3	ENSMUST00000200290	protein_coding	principal1	3	1	90586952	509
ENSMUSG00000059173	protein_coding	Pde1a	ENSMUST00000102654	protein_coding	principal4	2	-1	80128834	4122
ENSMUSG00000037708	protein_coding	Spag6	ENSMUST00000137796	processed_transcript		2	1	18694032	723
ENSMUSG00000037552	protein_coding	Plekhg2	ENSMUST00000152281	nonsense_mediated_decay		7	-1	28372080	858
ENSMUSG00000101658	unprocessed_pseudogene	Scgb1b28-ps	ENSMUST00000163647	unprocessed_pseudogene		7	1	31443823	290
ENSMUSG00000105195	processed_transcript	Gm43584	ENSMUST00000199762	processed_transcript		3	-1	104773270	605
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000239060	protein_coding		2	1	67446002	2704
ENSMUSG00000037708	protein_coding	Spag6	ENSMUST00000138017	processed_transcript		2	1	18694052	686
ENSMUSG00000037552	protein_coding	Plekhg2	ENSMUST00000147887	protein_coding		7	-1	28371508	476
ENSMUSG00000066258	protein_coding	Trim12a	ENSMUST00000134564	retained_intron		7	-1	104315466	3730
ENSMUSG00000108194	TEC	1700097M23Rik	ENSMUST00000204079	TEC		6	-1	81895339	1522
ENSMUSG00000103183	TEC	Gm37090	ENSMUST00000195694	TEC		4	-1	156022660	4105
ENSMUSG00000107672	processed_pseudogene	Gm3017	ENSMUST00000203603	processed_pseudogene		6	-1	50747812	1126
ENSMUSG00000099795	processed_pseudogene	Gm29492	ENSMUST00000187124	processed_pseudogene		7	-1	31471396	457
ENSMUSG00000052833	protein_coding	Sae1	ENSMUST00000211741	protein_coding		7	-1	16387806	1663
ENSMUSG00000042804	protein_coding	Gpr153	ENSMUST00000055754	protein_coding	principal2	4	1	152279012	3757
ENSMUSG00000001021	protein_coding	S100a3	ENSMUST00000001047	protein_coding	principal1	3	1	90600215	712
ENSMUSG00000052833	protein_coding	Sae1	ENSMUST00000210999	protein_coding	principal1	7	-1	16387806	1254
ENSMUSG00000087114	antisense	Gm16099	ENSMUST00000151303	antisense		10	1	81024811	379
ENSMUSG00000087114	antisense	Gm16099	ENSMUST00000151873	antisense		10	1	81025083	660
ENSMUSG00000096869	protein_coding	Gm6676	ENSMUST00000166493	protein_coding	principal5	14	-1	7125412	2066
ENSMUSG00000042804	protein_coding	Gpr153	ENSMUST00000144035	processed_transcript		4	1	152282370	427
ENSMUSG00000096869	protein_coding	Gm6676	ENSMUST00000178376	protein_coding	alternative2	14	-1	7125330	618
ENSMUSG00000001021	protein_coding	S100a3	ENSMUST00000196635	retained_intron		3	1	90600245	2458
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000028410	protein_coding	principal1	2	1	67446002	11955
ENSMUSG00000107667	lincRNA	C530044C16Rik	ENSMUST00000205217	lincRNA		6	1	50776115	1239
ENSMUSG00000015950	protein_coding	Ncf1	ENSMUST00000146354	nonsense_mediated_decay		5	-1	134229625	1497
ENSMUSG00000042804	protein_coding	Gpr153	ENSMUST00000105651	protein_coding	principal2	4	1	152274362	3777
ENSMUSG00000067616	protein_coding	Klk11	ENSMUST00000080211	protein_coding		7	1	43774604	1312
ENSMUSG00000107667	lincRNA	C530044C16Rik	ENSMUST00000204275	lincRNA		6	1	50776324	1624
ENSMUSG00000103155	processed_pseudogene	Gm8109	ENSMUST00000194076	processed_pseudogene		3	1	54021164	746
ENSMUSG00000107978	lincRNA	Gm44109	ENSMUST00000204514	lincRNA		6	-1	50803031	1954
ENSMUSG00000105067	processed_pseudogene	Gm18018	ENSMUST00000198273	processed_pseudogene		3	1	54029992	408
ENSMUSG00000043670	protein_coding	Diras1	ENSMUST00000055125	protein_coding	principal1	10	-1	81025409	2953
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000112347	protein_coding		2	1	67446002	11979
ENSMUSG00000052833	protein_coding	Sae1	ENSMUST00000094815	protein_coding	principal1	7	-1	16387785	1875
ENSMUSG00000041483	protein_coding	Zfp281	ENSMUST00000047734	protein_coding	principal1	1	1	136624901	4933
ENSMUSG00000001020	protein_coding	S100a4	ENSMUST00000001046	protein_coding	principal1	3	1	90603771	498
ENSMUSG00000038540	protein_coding	Tmc3	ENSMUST00000039317	protein_coding	principal2	7	1	83584931	6221
ENSMUSG00000107993	lincRNA	G930045G22Rik	ENSMUST00000161723	lincRNA		6	-1	50878077	673
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000238878	protein_coding		2	1	67446004	1095
ENSMUSG00000118645	lincRNA	AC153376.1	ENSMUST00000101402	lincRNA		6	-1	50847770	480
ENSMUSG00000043670	protein_coding	Diras1	ENSMUST00000144640	protein_coding		10	-1	81025662	462
ENSMUSG00000027022	protein_coding	Xirp2	ENSMUST00000239164	protein_coding		2	1	67516962	754
ENSMUSG00000015950	protein_coding	Ncf1	ENSMUST00000111275	protein_coding	principal3	5	-1	134229625	2721
ENSMUSG00000001020	protein_coding	S100a4	ENSMUST00000142476	protein_coding		3	1	90604911	336
ENSMUSG00000038540	protein_coding	Tmc3	ENSMUST00000164944	protein_coding	alternative2	7	1	83585092	3306
ENSMUSG00000052833	protein_coding	Sae1	ENSMUST00000209749	processed_transcript		7	-1	16368602	499
ENSMUSG00000041483	protein_coding	Zfp281	ENSMUST00000112046	protein_coding	principal1	1	1	136624901	4937
ENSMUSG00000038540	protein_coding	Tmc3	ENSMUST00000171397	retained_intron		7	1	83597527	627
ENSMUSG00000087467	antisense	Gm13601	ENSMUST00000142314	antisense		2	-1	67516525	404
ENSMUSG00000105518	protein_coding	Gm42674	ENSMUST00000107330	nonsense_mediated_decay	principal1	3	1	90601904	446
ENSMUSG00000015950	protein_coding	Ncf1	ENSMUST00000016094	protein_coding	alternative2	5	-1	134229625	2763
ENSMUSG00000015950	protein_coding	Ncf1	ENSMUST00000144086	protein_coding		5	-1	134229625	2882
ENSMUSG00000015950	protein_coding	Ncf1	ENSMUST00000182626	retained_intron		5	-1	134222222	690
ENSMUSG00000049107	protein_coding	Ntf3	ENSMUST00000204542	protein_coding	alternative1	6	-1	126164960	1343
ENSMUSG00000099958	processed_transcript	1700010B13Rik	ENSMUST00000189435	bidirectional_promoter_lncRNA		15	1	73645852	1549
ENSMUSG00000020077	protein_coding	Srgn	ENSMUST00000160987	protein_coding	principal1	10	-1	62527451	1727
ENSMUSG00000099958	processed_transcript	1700010B13Rik	ENSMUST00000188278	retained_intron		15	1	73645874	1729
ENSMUSG00000027423	protein_coding	Snx5	ENSMUST00000110030	protein_coding	principal1	2	-1	144270906	2512
ENSMUSG00000020077	protein_coding	Srgn	ENSMUST00000162161	protein_coding	principal1	10	-1	62507938	694
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000209182	lincRNA		7	1	71264275	1168
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000207237	lincRNA		7	1	71264275	527
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000209171	lincRNA		7	1	71264275	536
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000208757	lincRNA		7	1	71264275	641
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000207149	lincRNA		7	1	71368512	888
ENSMUSG00000049107	protein_coding	Ntf3	ENSMUST00000112244	protein_coding	alternative1	6	-1	126166715	1399
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000208934	lincRNA		7	1	71368567	949
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000208988	lincRNA		7	1	71368567	1025
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000207120	lincRNA		7	1	71369521	589
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000207076	lincRNA		7	1	71370000	520
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000207028	lincRNA		7	1	71370002	714
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000207268	lincRNA		7	1	71370014	564
ENSMUSG00000027423	protein_coding	Snx5	ENSMUST00000155509	processed_transcript		2	-1	144270784	306
ENSMUSG00000002228	protein_coding	Ppm1j	ENSMUST00000002298	protein_coding	principal1	3	1	104781056	1721
ENSMUSG00000037405	protein_coding	Icam1	ENSMUST00000215003	retained_intron		9	1	21015985	2203
ENSMUSG00000099853	lincRNA	Gm29328	ENSMUST00000189063	lincRNA		7	1	71370333	435
ENSMUSG00000020077	protein_coding	Srgn	ENSMUST00000160643	protein_coding		10	-1	62527425	384
ENSMUSG00000037708	protein_coding	Spag6	ENSMUST00000095132	protein_coding	principal1	2	1	18699023	2458
ENSMUSG00000099558	lincRNA	Gm29295	ENSMUST00000190004	lincRNA		7	1	71351451	1371
ENSMUSG00000027423	protein_coding	Snx5	ENSMUST00000028909	protein_coding	principal1	2	-1	144270572	2419
ENSMUSG00000020077	protein_coding	Srgn	ENSMUST00000159020	protein_coding		10	-1	62508097	346
ENSMUSG00000109548	TEC	Gm45066	ENSMUST00000207528	TEC		7	1	71331493	2551
ENSMUSG00000002228	protein_coding	Ppm1j	ENSMUST00000197264	retained_intron		3	1	104785609	410
ENSMUSG00000020077	protein_coding	Srgn	ENSMUST00000162956	processed_transcript		10	-1	62527425	466
ENSMUSG00000037708	protein_coding	Spag6	ENSMUST00000173763	protein_coding		2	1	18699084	626
ENSMUSG00000015950	protein_coding	Ncf1	ENSMUST00000139249	retained_intron		5	-1	134228399	923
ENSMUSG00000049107	protein_coding	Ntf3	ENSMUST00000050484	protein_coding	principal3	6	-1	126166910	1483
ENSMUSG00000087609	lincRNA	4930442J19Rik	ENSMUST00000129286	lincRNA		2	1	151301974	542
ENSMUSG00000027423	protein_coding	Snx5	ENSMUST00000156936	processed_transcript		2	-1	144255403	378
ENSMUSG00000114639	lincRNA	Gm31946	ENSMUST00000225497	lincRNA		13	1	78427248	317
ENSMUSG00000015950	protein_coding	Ncf1	ENSMUST00000126934	retained_intron		5	-1	134227810	664
ENSMUSG00000060002	protein_coding	Chpt1	ENSMUST00000148899	protein_coding		10	-1	88476440	630
ENSMUSG00000020077	protein_coding	Srgn	ENSMUST00000020271	protein_coding	principal1	10	-1	62507755	938
ENSMUSG00000092353	lincRNA	Gm20539	ENSMUST00000174811	lincRNA		2	-1	18760862	1384
ENSMUSG00000081139	processed_pseudogene	Gm13333	ENSMUST00000119424	processed_pseudogene		2	1	18758984	781
ENSMUSG00000027423	protein_coding	Snx5	ENSMUST00000138745	processed_transcript		2	-1	144253705	369
ENSMUSG00000027423	protein_coding	Snx5	ENSMUST00000125285	processed_transcript		2	-1	144252677	350
ENSMUSG00000027423	protein_coding	Snx5	ENSMUST00000124389	processed_transcript		2	-1	144255382	602
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000028098	protein_coding	principal1	2	-1	48949276	4066
ENSMUSG00000087609	lincRNA	4930442J19Rik	ENSMUST00000157058	lincRNA		2	1	151302028	1721
ENSMUSG00000082436	processed_pseudogene	Gm11688	ENSMUST00000122145	processed_pseudogene		2	-1	144261541	308
ENSMUSG00000067616	protein_coding	Klk11	ENSMUST00000206165	retained_intron		7	1	43776329	955
ENSMUSG00000083391	processed_pseudogene	Gm14148	ENSMUST00000122433	processed_pseudogene		2	1	151374008	1008
ENSMUSG00000067616	protein_coding	Klk11	ENSMUST00000205566	processed_transcript		7	1	43776480	754
ENSMUSG00000067616	protein_coding	Klk11	ENSMUST00000205415	processed_transcript		7	1	43776480	915
ENSMUSG00000092553	processed_pseudogene	Gm20428	ENSMUST00000174365	processed_pseudogene		1	-1	39276565	283
ENSMUSG00000061119	protein_coding	Prcp	ENSMUST00000208686	retained_intron		7	1	92874470	2093
ENSMUSG00000024259	protein_coding	Slc25a46	ENSMUST00000233997	nonsense_mediated_decay		18	-1	31609911	1823
ENSMUSG00000086190	antisense	4930579M01Rik	ENSMUST00000130943	antisense		8	-1	47038177	933
ENSMUSG00000024259	protein_coding	Slc25a46	ENSMUST00000060396	protein_coding	principal1	18	-1	31609902	4371
ENSMUSG00000067616	protein_coding	Klk11	ENSMUST00000171458	protein_coding	principal1	7	1	43776329	1260
ENSMUSG00000002274	protein_coding	Metrn	ENSMUST00000165838	protein_coding	principal2	17	-1	25797083	2751
ENSMUSG00000026077	protein_coding	Npas2	ENSMUST00000173050	protein_coding		1	1	39193731	484
ENSMUSG00000002274	protein_coding	Metrn	ENSMUST00000237849	retained_intron		17	-1	25796081	1175
ENSMUSG00000002274	protein_coding	Metrn	ENSMUST00000236963	protein_coding	alternative2	17	-1	25796723	1010
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000156956	processed_transcript		2	-1	48910013	909
ENSMUSG00000057228	protein_coding	Aadat	ENSMUST00000079472	protein_coding	principal2	8	1	60505932	1972
ENSMUSG00000097275	antisense	Gm26648	ENSMUST00000181925	antisense		5	-1	24704690	5831
ENSMUSG00000002274	protein_coding	Metrn	ENSMUST00000235925	protein_coding	alternative2	17	-1	25796968	698
ENSMUSG00000057228	protein_coding	Aadat	ENSMUST00000211032	processed_transcript		8	1	60506115	641
ENSMUSG00000002274	protein_coding	Metrn	ENSMUST00000238040	protein_coding	alternative2	17	-1	25796968	780
ENSMUSG00000057228	protein_coding	Aadat	ENSMUST00000209338	protein_coding	alternative2	8	1	60506511	1597
ENSMUSG00000054046	protein_coding	Klk13	ENSMUST00000066834	protein_coding	principal1	7	1	43712567	1809
ENSMUSG00000108609	processed_pseudogene	Gm7424	ENSMUST00000206919	processed_pseudogene		6	-1	83601708	902
ENSMUSG00000035429	protein_coding	Ptprh	ENSMUST00000206999	nonsense_mediated_decay		7	-1	4603141	3495
ENSMUSG00000109930	bidirectional_promoter_lncRNA	Gm34730	ENSMUST00000210674	bidirectional_promoter_lncRNA		8	-1	60632731	4077
ENSMUSG00000054046	protein_coding	Klk13	ENSMUST00000206554	protein_coding		7	1	43713399	718
ENSMUSG00000002274	protein_coding	Metrn	ENSMUST00000235294	retained_intron		17	-1	25797055	1198
ENSMUSG00000041954	protein_coding	Tnfrsf18	ENSMUST00000103173	protein_coding	principal2	4	1	156026164	1189
ENSMUSG00000062184	protein_coding	Hs6st2	ENSMUST00000088172	protein_coding		X	-1	51681703	4318
ENSMUSG00000054046	protein_coding	Klk13	ENSMUST00000205457	protein_coding		7	1	43714959	667
ENSMUSG00000002274	protein_coding	Metrn	ENSMUST00000002344	protein_coding	principal2	17	-1	25797136	987
ENSMUSG00000035429	protein_coding	Ptprh	ENSMUST00000166650	protein_coding	principal1	7	-1	4604041	3642
ENSMUSG00000062184	protein_coding	Hs6st2	ENSMUST00000114871	protein_coding	principal1	X	-1	51681856	4351
ENSMUSG00000041954	protein_coding	Tnfrsf18	ENSMUST00000141260	retained_intron		4	1	156026332	1188
ENSMUSG00000062184	protein_coding	Hs6st2	ENSMUST00000142738	retained_intron		X	-1	51681348	3800
ENSMUSG00000062184	protein_coding	Hs6st2	ENSMUST00000140145	processed_transcript		X	-1	51681086	421
ENSMUSG00000035429	protein_coding	Ptprh	ENSMUST00000205417	retained_intron		7	-1	4564421	805
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000143286	protein_coding	alternative2	Y	-1	1245691	5083
ENSMUSG00000062184	protein_coding	Hs6st2	ENSMUST00000142983	processed_transcript		X	-1	51680565	456
ENSMUSG00000082968	processed_pseudogene	Gm14581	ENSMUST00000121726	processed_pseudogene		X	-1	51629687	198
ENSMUSG00000024942	protein_coding	Capn1	ENSMUST00000025891	protein_coding	principal1	19	-1	6015206	3060
ENSMUSG00000035429	protein_coding	Ptprh	ENSMUST00000205341	processed_transcript		7	-1	4603139	660
ENSMUSG00000035429	protein_coding	Ptprh	ENSMUST00000049113	protein_coding	principal1	7	-1	4603141	3495
ENSMUSG00000038151	protein_coding	Prdm1	ENSMUST00000039174	protein_coding	alternative2	10	-1	44458748	5281
ENSMUSG00000030235	protein_coding	Slco1c1	ENSMUST00000135562	nonsense_mediated_decay		6	1	141524386	2680
ENSMUSG00000041954	protein_coding	Tnfrsf18	ENSMUST00000040274	protein_coding		4	1	156026342	804
ENSMUSG00000104412	lincRNA	Gm37798	ENSMUST00000193026	lincRNA		Y	1	25845560	2169
ENSMUSG00000024942	protein_coding	Capn1	ENSMUST00000236798	protein_coding		19	-1	6015897	2260
ENSMUSG00000104321	unprocessed_pseudogene	Gm37318	ENSMUST00000194325	unprocessed_pseudogene		Y	1	25854771	695
ENSMUSG00000041954	protein_coding	Tnfrsf18	ENSMUST00000122001	protein_coding	alternative2	4	1	156026342	1078
ENSMUSG00000024942	protein_coding	Capn1	ENSMUST00000237519	protein_coding		19	-1	6015385	679
ENSMUSG00000103892	unprocessed_pseudogene	Gm31572	ENSMUST00000193341	unprocessed_pseudogene		Y	1	25891627	615
ENSMUSG00000103969	unprocessed_pseudogene	Gm21890	ENSMUST00000195190	unprocessed_pseudogene		Y	1	25921142	696
ENSMUSG00000041954	protein_coding	Tnfrsf18	ENSMUST00000124339	processed_transcript		4	1	156026378	615
ENSMUSG00000069441	protein_coding	Dsg1a	ENSMUST00000077146	protein_coding	principal1	18	1	20310811	5686
ENSMUSG00000038151	protein_coding	Prdm1	ENSMUST00000105490	protein_coding	principal2	10	-1	44458687	4025
ENSMUSG00000112057	processed_pseudogene	Gm21321	ENSMUST00000220179	processed_pseudogene		10	-1	7390783	446
ENSMUSG00000041954	protein_coding	Tnfrsf18	ENSMUST00000125100	processed_transcript		4	1	156028368	328
ENSMUSG00000108392	processed_pseudogene	Gm9463	ENSMUST00000206707	processed_pseudogene		7	1	4611635	601
ENSMUSG00000038151	protein_coding	Prdm1	ENSMUST00000218369	protein_coding	alternative2	10	-1	44457210	2517
ENSMUSG00000021340	protein_coding	Gpld1	ENSMUST00000021773	protein_coding	principal1	13	1	24943152	5224
ENSMUSG00000087381	antisense	Gm16008	ENSMUST00000181389	antisense		4	-1	156023824	480
ENSMUSG00000024942	protein_coding	Capn1	ENSMUST00000236537	protein_coding		19	-1	6015203	409
ENSMUSG00000102339	unprocessed_pseudogene	Gm21443	ENSMUST00000179070	unprocessed_pseudogene		Y	1	25995821	696
ENSMUSG00000038151	protein_coding	Prdm1	ENSMUST00000167340	retained_intron		10	-1	44528501	830
ENSMUSG00000024942	protein_coding	Capn1	ENSMUST00000235138	protein_coding		19	-1	6015789	326
ENSMUSG00000107488	TEC	Gm31579	ENSMUST00000203306	TEC		6	1	50909770	966
ENSMUSG00000071202	protein_coding	Ccdc78	ENSMUST00000095500	protein_coding	principal1	17	1	25786580	1651
ENSMUSG00000087495	lincRNA	Gm14152	ENSMUST00000127020	lincRNA		2	-1	151432402	1073
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000154784	processed_transcript		2	-1	48949231	1477
ENSMUSG00000087495	lincRNA	Gm14152	ENSMUST00000137471	lincRNA		2	-1	151432372	472
ENSMUSG00000024942	protein_coding	Capn1	ENSMUST00000164843	protein_coding	principal1	19	-1	6015825	3048
ENSMUSG00000021340	protein_coding	Gpld1	ENSMUST00000128315	processed_transcript		13	1	24955854	540
ENSMUSG00000044430	protein_coding	Klk12	ENSMUST00000107970	protein_coding	principal1	7	1	43768897	1115
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000150492	processed_transcript		2	-1	48910668	868
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000128618	processed_transcript		2	-1	48912575	424
ENSMUSG00000087381	antisense	Gm16008	ENSMUST00000151836	antisense		4	-1	156031643	352
ENSMUSG00000021340	protein_coding	Gpld1	ENSMUST00000223873	retained_intron		13	1	24962627	411
ENSMUSG00000087381	antisense	Gm16008	ENSMUST00000126009	antisense		4	-1	156031622	810
ENSMUSG00000087495	lincRNA	Gm14152	ENSMUST00000139919	lincRNA		2	-1	151420221	518
ENSMUSG00000097404	antisense	Gm10814	ENSMUST00000180505	antisense		19	1	6012620	1969
ENSMUSG00000111064	processed_pseudogene	Gm30285	ENSMUST00000214614	processed_pseudogene		10	1	20292785	422
ENSMUSG00000095543	protein_coding	Vmn1r148	ENSMUST00000177774	protein_coding	principal1	7	1	22413583	924
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000141441	processed_transcript		2	-1	48949234	2133
ENSMUSG00000069713	lincRNA	4933406P04Rik	ENSMUST00000092680	lincRNA		10	-1	20312294	1789
ENSMUSG00000044430	protein_coding	Klk12	ENSMUST00000014063	protein_coding	principal1	7	1	43769100	924
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000142851	protein_coding		2	-1	48950039	812
ENSMUSG00000071202	protein_coding	Ccdc78	ENSMUST00000235405	retained_intron		17	1	25786580	2118
ENSMUSG00000118135	protein_coding	Gm50367	ENSMUST00000235889	protein_coding	principal1	17	-1	25795659	757
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000123789	processed_transcript		2	-1	48940365	464
ENSMUSG00000111047	transcribed_processed_pseudogene	Gm4780	ENSMUST00000215200	processed_transcript		10	1	30372918	2644
ENSMUSG00000097887	antisense	Gm26542	ENSMUST00000222498	antisense		11	1	50236953	611
ENSMUSG00000111047	transcribed_processed_pseudogene	Gm4780	ENSMUST00000213206	transcribed_processed_pseudogene		10	1	30373273	1242
ENSMUSG00000097887	antisense	Gm26542	ENSMUST00000180443	antisense		11	1	50237012	1235
ENSMUSG00000099925	protein_coding	Gm28827	ENSMUST00000187165	protein_coding	principal1	Y	1	83030947	923
ENSMUSG00000108734	TEC	Gm44817	ENSMUST00000205416	TEC		7	1	43692644	453
ENSMUSG00000094542	protein_coding	Vmn1r149	ENSMUST00000165916	protein_coding	principal1	7	-1	22438229	924
ENSMUSG00000097638	protein_coding	Carlr	ENSMUST00000181515	protein_coding	principal1	2	-1	18801818	2574
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000090976	protein_coding		2	-1	48949234	1153
ENSMUSG00000111397	TEC	Gm48232	ENSMUST00000214959	TEC		10	-1	30514123	2364
ENSMUSG00000026077	protein_coding	Npas2	ENSMUST00000056815	protein_coding	principal1	1	1	39194212	4236
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000153150	processed_transcript		2	-1	48934202	666
ENSMUSG00000027424	protein_coding	Mgme1	ENSMUST00000110028	protein_coding	principal1	2	1	144270663	2308
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000123809	processed_transcript		2	-1	48949232	647
ENSMUSG00000060002	protein_coding	Chpt1	ENSMUST00000134318	protein_coding		10	-1	88480872	548
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000149679	protein_coding		2	-1	48949241	383
ENSMUSG00000096871	protein_coding	Gm10665	ENSMUST00000098720	protein_coding	principal1	7	-1	22464075	966
ENSMUSG00000026761	protein_coding	Orc4	ENSMUST00000123271	protein_coding		2	-1	48950277	324
ENSMUSG00000020377	protein_coding	Ltc4s	ENSMUST00000221391	processed_transcript		11	-1	50237557	622
ENSMUSG00000026077	protein_coding	Npas2	ENSMUST00000172825	processed_transcript		1	1	39341555	474
ENSMUSG00000092563	processed_pseudogene	Gm3617	ENSMUST00000173076	processed_pseudogene		1	1	39314899	555
ENSMUSG00000111211	TEC	Gm48233	ENSMUST00000214092	TEC		10	-1	30532030	1117
ENSMUSG00000038173	protein_coding	Enpp6	ENSMUST00000039840	protein_coding	principal2	8	1	46986887	4970
ENSMUSG00000093853	protein_coding	Vmn1r151	ENSMUST00000166079	protein_coding	principal1	7	-1	22499678	918
ENSMUSG00000114522	lincRNA	Gm32067	ENSMUST00000224561	lincRNA		13	1	78483354	521
ENSMUSG00000038173	protein_coding	Enpp6	ENSMUST00000140149	retained_intron		8	1	46986925	586
ENSMUSG00000030235	protein_coding	Slco1c1	ENSMUST00000032362	protein_coding	principal2	6	1	141524386	3178
ENSMUSG00000038173	protein_coding	Enpp6	ENSMUST00000123066	nonsense_mediated_decay		8	1	46986927	1776
ENSMUSG00000030235	protein_coding	Slco1c1	ENSMUST00000205214	protein_coding		6	1	141524399	2515
ENSMUSG00000027424	protein_coding	Mgme1	ENSMUST00000028910	protein_coding	principal1	2	1	144270900	2840
ENSMUSG00000038173	protein_coding	Enpp6	ENSMUST00000119686	protein_coding	alternative2	8	1	46986954	1390
ENSMUSG00000030235	protein_coding	Slco1c1	ENSMUST00000203140	protein_coding	alternative2	6	1	141524535	2771
ENSMUSG00000030235	protein_coding	Slco1c1	ENSMUST00000203755	retained_intron		6	1	141546164	2300
ENSMUSG00000066026	protein_coding	Dhrs3	ENSMUST00000154208	protein_coding	principal1	4	1	144893077	2337
ENSMUSG00000038173	protein_coding	Enpp6	ENSMUST00000149593	protein_coding		8	1	47068931	832
ENSMUSG00000027424	protein_coding	Mgme1	ENSMUST00000110027	protein_coding	principal1	2	1	144270941	2359
ENSMUSG00000029345	protein_coding	Tfip11	ENSMUST00000031288	protein_coding	principal1	5	1	112326358	3560
ENSMUSG00000038173	protein_coding	Enpp6	ENSMUST00000210466	retained_intron		8	1	47082321	480
ENSMUSG00000022676	protein_coding	Snai2	ENSMUST00000023356	protein_coding	principal1	16	1	14705852	2021
ENSMUSG00000109888	antisense	Gm45600	ENSMUST00000210828	antisense		8	-1	47014177	234
ENSMUSG00000092224	unprocessed_pseudogene	Gm8815	ENSMUST00000173809	unprocessed_pseudogene		17	-1	36096805	620
ENSMUSG00000085817	lincRNA	Gm12668	ENSMUST00000134966	lincRNA		4	1	91626589	575
ENSMUSG00000066026	protein_coding	Dhrs3	ENSMUST00000105744	protein_coding		4	1	144892827	1226
ENSMUSG00000029345	protein_coding	Tfip11	ENSMUST00000198238	protein_coding		5	1	112326421	726
ENSMUSG00000114594	lincRNA	Gm48402	ENSMUST00000226045	lincRNA		13	1	78638017	585
ENSMUSG00000100754	unprocessed_pseudogene	Scgb2b5-ps	ENSMUST00000190227	unprocessed_pseudogene		7	-1	31501444	270
ENSMUSG00000029345	protein_coding	Tfip11	ENSMUST00000129528	protein_coding		5	1	112326492	634
ENSMUSG00000020377	protein_coding	Ltc4s	ENSMUST00000101265	protein_coding		11	-1	50238471	480
ENSMUSG00000112989	processed_pseudogene	Gm48143	ENSMUST00000221318	processed_pseudogene		12	-1	72741582	751
ENSMUSG00000029345	protein_coding	Tfip11	ENSMUST00000126736	retained_intron		5	1	112335642	827
ENSMUSG00000057411	protein_coding	Fam173a	ENSMUST00000237093	protein_coding		17	-1	25792267	700
ENSMUSG00000066026	protein_coding	Dhrs3	ENSMUST00000084184	nonsense_mediated_decay		4	1	144893219	1780
ENSMUSG00000066026	protein_coding	Dhrs3	ENSMUST00000142808	protein_coding		4	1	144893137	686
ENSMUSG00000039480	protein_coding	Nt5dc1	ENSMUST00000105512	protein_coding	alternative2	10	-1	34418539	2727
ENSMUSG00000047260	protein_coding	Emc6	ENSMUST00000054952	protein_coding	principal1	11	-1	73177037	1332
ENSMUSG00000057411	protein_coding	Fam173a	ENSMUST00000236842	retained_intron		17	-1	25792901	1886
ENSMUSG00000066026	protein_coding	Dhrs3	ENSMUST00000128926	processed_transcript		4	1	144893131	796
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000154666	nonsense_mediated_decay		Y	-1	1245694	5185
ENSMUSG00000066026	protein_coding	Dhrs3	ENSMUST00000133265	retained_intron		4	1	144918879	758
ENSMUSG00000101404	lincRNA	1700009C05Rik	ENSMUST00000191101	lincRNA		6	-1	81910800	788
ENSMUSG00000037405	protein_coding	Icam1	ENSMUST00000086399	protein_coding	principal1	9	1	21015985	2535
ENSMUSG00000078521	protein_coding	Aunip	ENSMUST00000105866	protein_coding	principal1	4	1	134510999	1275
ENSMUSG00000020377	protein_coding	Ltc4s	ENSMUST00000221525	protein_coding		11	-1	50238495	484
ENSMUSG00000034793	protein_coding	G6pc3	ENSMUST00000070334	protein_coding	principal1	11	1	102189620	1404
ENSMUSG00000066026	protein_coding	Dhrs3	ENSMUST00000171001	protein_coding		4	1	144892827	1349
ENSMUSG00000086042	lincRNA	Gm12670	ENSMUST00000123606	lincRNA		4	1	91646315	576
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000169754	protein_coding	principal3	1	1	87620312	4937
ENSMUSG00000047260	protein_coding	Emc6	ENSMUST00000108480	protein_coding	principal1	11	-1	73177002	563
ENSMUSG00000029346	protein_coding	Srrd	ENSMUST00000155756	processed_transcript		5	-1	112340022	871
ENSMUSG00000082523	processed_pseudogene	Gm12667	ENSMUST00000118299	processed_pseudogene		4	1	91708638	1332
ENSMUSG00000097535	antisense	Gm26592	ENSMUST00000180870	antisense		9	-1	21037782	1730
ENSMUSG00000020377	protein_coding	Ltc4s	ENSMUST00000222076	retained_intron		11	-1	50238516	709
ENSMUSG00000023960	protein_coding	Enpp5	ENSMUST00000154166	protein_coding	principal1	17	1	44078813	2490
ENSMUSG00000102825	TEC	Gm36990	ENSMUST00000191961	TEC		3	-1	32372989	1412
ENSMUSG00000034793	protein_coding	G6pc3	ENSMUST00000078975	protein_coding	principal1	11	1	102189669	1573
ENSMUSG00000101065	unprocessed_pseudogene	Scgb1b5-ps	ENSMUST00000189491	unprocessed_pseudogene		7	1	31507441	280
ENSMUSG00000116400	processed_pseudogene	Gm49530	ENSMUST00000230613	processed_pseudogene		16	-1	14791011	595
ENSMUSG00000029837	antisense	1700111E14Rik	ENSMUST00000031863	antisense		6	1	36937048	908
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000163222	retained_intron		1	1	87620356	364
ENSMUSG00000029608	protein_coding	Rph3a	ENSMUST00000079204	protein_coding	principal1	5	-1	121009538	4150
ENSMUSG00000114557	processed_pseudogene	Gm8345	ENSMUST00000225033	processed_pseudogene		13	-1	78954792	1705
ENSMUSG00000107310	transcribed_processed_pseudogene	Gm7452	ENSMUST00000200764	transcribed_processed_pseudogene		6	1	36956802	788
ENSMUSG00000100863	processed_pseudogene	Gm12669	ENSMUST00000122162	processed_pseudogene		4	-1	91806555	1009
ENSMUSG00000108978	lincRNA	Gm44689	ENSMUST00000208786	lincRNA		7	-1	71688447	1372
ENSMUSG00000034793	protein_coding	G6pc3	ENSMUST00000131382	processed_transcript		11	1	102189755	673
ENSMUSG00000107310	transcribed_processed_pseudogene	Gm7452	ENSMUST00000202891	processed_transcript		6	1	36956850	3039
ENSMUSG00000034793	protein_coding	G6pc3	ENSMUST00000139995	processed_transcript		11	1	102189826	541
ENSMUSG00000028954	protein_coding	Nub1	ENSMUST00000197407	protein_coding		5	1	24685532	3546
ENSMUSG00000099598	unprocessed_pseudogene	Scgb2b28-ps	ENSMUST00000188974	unprocessed_pseudogene		7	-1	31546807	337
ENSMUSG00000029608	protein_coding	Rph3a	ENSMUST00000202406	protein_coding	principal1	5	-1	121010080	4096
ENSMUSG00000095937	processed_pseudogene	Gm12671	ENSMUST00000119978	processed_pseudogene		4	-1	91852669	1002
ENSMUSG00000021760	protein_coding	Gpx8	ENSMUST00000231962	protein_coding		13	-1	113046393	769
ENSMUSG00000020377	protein_coding	Ltc4s	ENSMUST00000102772	protein_coding	principal1	11	-1	50238532	649
ENSMUSG00000100734	processed_pseudogene	Rpl23a-ps8	ENSMUST00000186144	processed_pseudogene		7	1	31603294	463
ENSMUSG00000029608	protein_coding	Rph3a	ENSMUST00000202326	protein_coding	principal1	5	-1	121008542	2621
ENSMUSG00000034793	protein_coding	G6pc3	ENSMUST00000124594	processed_transcript		11	1	102191809	895
ENSMUSG00000029608	protein_coding	Rph3a	ENSMUST00000200792	protein_coding		5	-1	121010092	750
ENSMUSG00000034793	protein_coding	G6pc3	ENSMUST00000145490	processed_transcript		11	1	102192019	848
ENSMUSG00000039480	protein_coding	Nt5dc1	ENSMUST00000047885	protein_coding	principal2	10	-1	34418552	2743
ENSMUSG00000023960	protein_coding	Enpp5	ENSMUST00000024756	protein_coding	principal1	17	1	44078845	2534
ENSMUSG00000034793	protein_coding	G6pc3	ENSMUST00000153178	processed_transcript		11	1	102192025	659
ENSMUSG00000082369	processed_pseudogene	Gm14208	ENSMUST00000119645	processed_pseudogene		2	-1	119509229	678
ENSMUSG00000106841	TEC	Gm42656	ENSMUST00000201506	TEC		5	-1	120972347	2305
ENSMUSG00000087517	lincRNA	4930577H14Rik	ENSMUST00000151367	lincRNA		4	-1	91939952	790
ENSMUSG00000020377	protein_coding	Ltc4s	ENSMUST00000125555	protein_coding		11	-1	50238616	716
ENSMUSG00000061119	protein_coding	Prcp	ENSMUST00000076052	protein_coding	principal1	7	1	92875252	2967
ENSMUSG00000102002	unprocessed_pseudogene	Scgb2b6	ENSMUST00000188132	unprocessed_pseudogene		7	-1	31619526	330
ENSMUSG00000039480	protein_coding	Nt5dc1	ENSMUST00000130290	processed_transcript		10	-1	34418528	1978
ENSMUSG00000020377	protein_coding	Ltc4s	ENSMUST00000221081	processed_transcript		11	-1	50237634	593
ENSMUSG00000023960	protein_coding	Enpp5	ENSMUST00000126032	nonsense_mediated_decay		17	1	44078879	4545
ENSMUSG00000039480	protein_coding	Nt5dc1	ENSMUST00000213269	protein_coding		10	-1	34418468	802
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000042275	protein_coding	alternative2	1	1	87620362	4880
ENSMUSG00000021760	protein_coding	Gpx8	ENSMUST00000022282	protein_coding	principal1	13	-1	113046410	1042
ENSMUSG00000057411	protein_coding	Fam173a	ENSMUST00000072735	protein_coding	principal2	17	-1	25792798	1321
ENSMUSG00000082809	processed_pseudogene	Gm14150	ENSMUST00000122404	processed_pseudogene		2	1	151458956	1354
ENSMUSG00000039480	protein_coding	Nt5dc1	ENSMUST00000099973	protein_coding		10	-1	34418481	761
ENSMUSG00000001014	protein_coding	Icam4	ENSMUST00000001040	protein_coding	principal2	9	1	21029373	971
ENSMUSG00000061119	protein_coding	Prcp	ENSMUST00000207992	processed_transcript		7	1	92875295	687
ENSMUSG00000028954	protein_coding	Nub1	ENSMUST00000068825	protein_coding	principal1	5	1	24685824	3269
ENSMUSG00000116554	antisense	4930563N14Rik	ENSMUST00000232584	antisense		13	-1	113079147	1042
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000164592	processed_transcript		1	1	87620389	2480
ENSMUSG00000057411	protein_coding	Fam173a	ENSMUST00000235327	retained_intron		17	-1	25792373	1267
ENSMUSG00000061928	protein_coding	Dsg1b	ENSMUST00000076737	protein_coding	principal1	18	1	20376729	3965
ENSMUSG00000061119	protein_coding	Prcp	ENSMUST00000208103	retained_intron		7	1	92875300	790
ENSMUSG00000074650	TEC	Gm10735	ENSMUST00000099162	TEC		13	-1	113042243	2943
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000069309	protein_coding	principal3	Y	-1	1245718	5208
ENSMUSG00000001014	protein_coding	Icam4	ENSMUST00000215077	protein_coding	alternative2	9	1	21029454	1028
ENSMUSG00000061119	protein_coding	Prcp	ENSMUST00000207594	protein_coding		7	1	92875300	2245
ENSMUSG00000028954	protein_coding	Nub1	ENSMUST00000200337	retained_intron		5	1	24685987	3862
ENSMUSG00000101582	unprocessed_pseudogene	Gm28828	ENSMUST00000186601	unprocessed_pseudogene		Y	-1	83118326	696
ENSMUSG00000031026	protein_coding	Trim66	ENSMUST00000106739	protein_coding		7	-1	109493738	9250
ENSMUSG00000057411	protein_coding	Fam173a	ENSMUST00000236683	protein_coding	alternative2	17	-1	25792387	627
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000036473	protein_coding	principal1	2	1	32236590	2918
ENSMUSG00000101273	unprocessed_pseudogene	Gm28831	ENSMUST00000187739	unprocessed_pseudogene		Y	-1	83154954	315
ENSMUSG00000057411	protein_coding	Fam173a	ENSMUST00000237703	retained_intron		17	-1	25792395	1528
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000139365	protein_coding	alternative2	Y	-1	1245724	4684
ENSMUSG00000057411	protein_coding	Fam173a	ENSMUST00000236161	protein_coding	alternative2	17	-1	25792077	641
ENSMUSG00000109268	TEC	9530078K11Rik	ENSMUST00000208883	TEC		7	1	92902179	694
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000154004	protein_coding	alternative2	Y	-1	1245759	4267
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000185837	retained_intron		Y	-1	1137181	2368
ENSMUSG00000039462	protein_coding	Col10a1	ENSMUST00000105511	protein_coding	principal1	10	1	34389981	3130
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000126784	retained_intron		2	1	32236643	440
ENSMUSG00000107623	lincRNA	Gm10415	ENSMUST00000204181	lincRNA		6	-1	126328686	2825
ENSMUSG00000078926	protein_coding	Cdc20b	ENSMUST00000180543	protein_coding		13	1	113035111	271
ENSMUSG00000048490	protein_coding	Nrip1	ENSMUST00000121927	protein_coding	principal1	16	-1	76373827	7868
ENSMUSG00000101659	lincRNA	Gm29009	ENSMUST00000186340	lincRNA		6	1	126331750	496
ENSMUSG00000050567	protein_coding	Maml1	ENSMUST00000135868	protein_coding		11	-1	50291804	4924
ENSMUSG00000097274	antisense	Gm47512	ENSMUST00000181185	antisense		10	-1	34298907	2777
ENSMUSG00000097274	antisense	Gm47512	ENSMUST00000214449	antisense		10	-1	34298814	1641
ENSMUSG00000029346	protein_coding	Srrd	ENSMUST00000146510	protein_coding		5	-1	112343020	1064
ENSMUSG00000040043	protein_coding	Rbms2	ENSMUST00000238843	protein_coding	alternative2	10	-1	128180297	3380
ENSMUSG00000040043	protein_coding	Rbms2	ENSMUST00000099139	protein_coding	alternative2	10	-1	128180297	3302
ENSMUSG00000055780	protein_coding	Usp26	ENSMUST00000114869	protein_coding	principal1	X	-1	51801233	4133
ENSMUSG00000019851	protein_coding	Perp	ENSMUST00000019998	protein_coding	principal1	10	1	18845020	1952
ENSMUSG00000055780	protein_coding	Usp26	ENSMUST00000069509	protein_coding	principal1	X	-1	51801144	4120
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000143958	nonsense_mediated_decay		Y	-1	1245756	2903
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000072999	nonsense_mediated_decay		1	1	87620398	4677
ENSMUSG00000044949	protein_coding	Ubtd2	ENSMUST00000051053	protein_coding	principal1	11	1	32455370	1012
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000137048	protein_coding		Y	-1	1245702	2012
ENSMUSG00000111318	lincRNA	Gm48483	ENSMUST00000214387	lincRNA		10	-1	18887029	993
ENSMUSG00000086659	antisense	Gm14146	ENSMUST00000155885	antisense		2	-1	151469613	508
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000133976	retained_intron		Y	-1	1169186	587
ENSMUSG00000078926	protein_coding	Cdc20b	ENSMUST00000181568	protein_coding	alternative2	13	1	113035379	1494
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000154684	retained_intron		2	1	32236672	2177
ENSMUSG00000028946	protein_coding	Hes3	ENSMUST00000094438	protein_coding	principal2	4	-1	152291662	1829
ENSMUSG00000029346	protein_coding	Srrd	ENSMUST00000031289	protein_coding	principal1	5	-1	112343040	1110
ENSMUSG00000078926	protein_coding	Cdc20b	ENSMUST00000109244	protein_coding	principal2	13	1	113035379	1620
ENSMUSG00000101508	lincRNA	Gm28832	ENSMUST00000188603	lincRNA		Y	1	83191727	1498
ENSMUSG00000050830	protein_coding	Vwc2	ENSMUST00000109681	protein_coding	principal1	11	1	11114223	3371
ENSMUSG00000028946	protein_coding	Hes3	ENSMUST00000218045	protein_coding	alternative2	4	-1	152288605	962
ENSMUSG00000034175	protein_coding	Rhbdd3	ENSMUST00000101610	protein_coding	principal1	11	1	5098926	2333
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000157073	processed_transcript		Y	-1	1245738	2148
ENSMUSG00000101508	lincRNA	Gm28832	ENSMUST00000190616	lincRNA		Y	1	83192180	433
ENSMUSG00000029346	protein_coding	Srrd	ENSMUST00000125628	retained_intron		5	-1	112339932	699
ENSMUSG00000078926	protein_coding	Cdc20b	ENSMUST00000181117	protein_coding	alternative2	13	1	113035379	1608
ENSMUSG00000050567	protein_coding	Maml1	ENSMUST00000059458	protein_coding	principal1	11	-1	50292311	5528
ENSMUSG00000078926	protein_coding	Cdc20b	ENSMUST00000181741	protein_coding		13	1	113035387	230
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000150715	nonsense_mediated_decay		Y	-1	1245467	501
ENSMUSG00000034175	protein_coding	Rhbdd3	ENSMUST00000036320	protein_coding		11	1	5099439	1790
ENSMUSG00000029346	protein_coding	Srrd	ENSMUST00000156083	processed_transcript		5	-1	112343018	837
ENSMUSG00000040043	protein_coding	Rbms2	ENSMUST00000092033	protein_coding	principal4	10	-1	128176479	1481
ENSMUSG00000068457	protein_coding	Uty	ENSMUST00000154527	retained_intron		Y	-1	1245739	667
ENSMUSG00000029346	protein_coding	Srrd	ENSMUST00000147940	processed_transcript		5	-1	112340219	422
ENSMUSG00000050830	protein_coding	Vwc2	ENSMUST00000129670	nonsense_mediated_decay		11	1	11114744	3712
ENSMUSG00000043274	protein_coding	Olfr1123	ENSMUST00000214663	processed_transcript		2	1	87416635	491
ENSMUSG00000034175	protein_coding	Rhbdd3	ENSMUST00000150632	protein_coding		11	1	5099476	645
ENSMUSG00000050830	protein_coding	Vwc2	ENSMUST00000154155	processed_transcript		11	1	11116485	397
ENSMUSG00000044056	protein_coding	Efcab9	ENSMUST00000054327	protein_coding	principal2	11	-1	32527579	754
ENSMUSG00000040043	protein_coding	Rbms2	ENSMUST00000217722	retained_intron		10	-1	128134235	639
ENSMUSG00000034175	protein_coding	Rhbdd3	ENSMUST00000148761	protein_coding		11	1	5100170	902
ENSMUSG00000044387	lincRNA	2410080I02Rik	ENSMUST00000142712	lincRNA		19	1	23134900	414
ENSMUSG00000068617	protein_coding	Efcab1	ENSMUST00000229825	nonsense_mediated_decay		16	1	14906606	1511
ENSMUSG00000050830	protein_coding	Vwc2	ENSMUST00000056344	protein_coding	principal1	11	1	11115851	1350
ENSMUSG00000043274	protein_coding	Olfr1123	ENSMUST00000216208	protein_coding	alternative2	2	1	87416635	5245
ENSMUSG00000048490	protein_coding	Nrip1	ENSMUST00000054178	protein_coding	principal1	16	-1	76373049	4529
ENSMUSG00000108153	processed_pseudogene	Gm44402	ENSMUST00000203677	processed_pseudogene		6	1	50967268	238
ENSMUSG00000043274	protein_coding	Olfr1123	ENSMUST00000054974	protein_coding	principal2	2	1	87418050	972
ENSMUSG00000031026	protein_coding	Trim66	ENSMUST00000106741	protein_coding	principal1	7	-1	109508134	4417
ENSMUSG00000040043	protein_coding	Rbms2	ENSMUST00000217750	retained_intron		10	-1	128137504	588
ENSMUSG00000044056	protein_coding	Efcab9	ENSMUST00000109377	protein_coding	alternative2	11	-1	32532081	615
ENSMUSG00000034175	protein_coding	Rhbdd3	ENSMUST00000134267	protein_coding		11	1	5099433	714
ENSMUSG00000048490	protein_coding	Nrip1	ENSMUST00000231585	protein_coding		16	-1	76373826	706
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000168783	protein_coding	alternative2	1	1	87620399	3854
ENSMUSG00000040043	protein_coding	Rbms2	ENSMUST00000218884	retained_intron		10	-1	128143729	555
ENSMUSG00000034175	protein_coding	Rhbdd3	ENSMUST00000139742	protein_coding		11	1	5099608	619
ENSMUSG00000048490	protein_coding	Nrip1	ENSMUST00000140483	protein_coding		16	-1	76323658	432
ENSMUSG00000031026	protein_coding	Trim66	ENSMUST00000033339	protein_coding		7	-1	109508134	4354
ENSMUSG00000048490	protein_coding	Nrip1	ENSMUST00000231304	processed_transcript		16	-1	76373044	540
ENSMUSG00000034175	protein_coding	Rhbdd3	ENSMUST00000146879	processed_transcript		11	1	5099273	467
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000165554	protein_coding		1	1	87620627	370
ENSMUSG00000034175	protein_coding	Rhbdd3	ENSMUST00000137370	processed_transcript		11	1	5099077	538
ENSMUSG00000048490	protein_coding	Nrip1	ENSMUST00000141182	retained_intron		16	-1	76373037	2823
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000163576	protein_coding		1	1	87621674	344
ENSMUSG00000031026	protein_coding	Trim66	ENSMUST00000137704	processed_transcript		7	-1	109475134	726
ENSMUSG00000033863	protein_coding	Klf9	ENSMUST00000036884	protein_coding	principal1	19	1	23141226	4486
ENSMUSG00000034175	protein_coding	Rhbdd3	ENSMUST00000129016	processed_transcript		11	1	5100237	1707
ENSMUSG00000048490	protein_coding	Nrip1	ENSMUST00000128871	retained_intron		16	-1	76373040	2617
ENSMUSG00000034175	protein_coding	Rhbdd3	ENSMUST00000109878	protein_coding	principal1	11	1	5100157	1611
ENSMUSG00000033863	protein_coding	Klf9	ENSMUST00000236357	processed_transcript		19	1	23143644	1118
ENSMUSG00000048490	protein_coding	Nrip1	ENSMUST00000145649	retained_intron		16	-1	76373049	1139
ENSMUSG00000107619	lincRNA	Gm32479	ENSMUST00000204226	lincRNA		6	-1	51287855	2739
ENSMUSG00000103460	processed_pseudogene	Gm18491	ENSMUST00000192492	processed_pseudogene		3	-1	20784063	1594
ENSMUSG00000102986	processed_pseudogene	Gm38323	ENSMUST00000192450	processed_pseudogene		3	1	20787937	210
ENSMUSG00000032174	protein_coding	Icam5	ENSMUST00000019616	protein_coding	principal1	9	1	21032073	2947
ENSMUSG00000075327	protein_coding	Zbtb2	ENSMUST00000100077	protein_coding	principal1	10	-1	4387475	3086
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000170300	protein_coding		1	1	87676239	3942
ENSMUSG00000023961	protein_coding	Enpp4	ENSMUST00000024757	protein_coding	principal1	17	-1	44105809	4560
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000167032	protein_coding		1	1	87676239	4125
ENSMUSG00000068617	protein_coding	Efcab1	ENSMUST00000228998	nonsense_mediated_decay		16	1	14906629	1048
ENSMUSG00000110790	antisense	Gm47079	ENSMUST00000216917	antisense		9	-1	21032357	3485
ENSMUSG00000032125	protein_coding	Robo4	ENSMUST00000156972	nonsense_mediated_decay		9	1	37401897	3947
ENSMUSG00000023961	protein_coding	Enpp4	ENSMUST00000143137	protein_coding	principal1	17	-1	44105764	4445
ENSMUSG00000097113	lincRNA	Gm19705	ENSMUST00000180495	lincRNA		1	1	136670769	496
ENSMUSG00000075327	protein_coding	Zbtb2	ENSMUST00000100078	protein_coding	principal1	10	-1	4388108	3226
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000112745	protein_coding		2	1	48949508	6037
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000129163	retained_intron		2	1	32236685	3340
ENSMUSG00000081439	processed_pseudogene	Gm7840	ENSMUST00000122086	processed_pseudogene		X	-1	51840615	533
ENSMUSG00000087211	lincRNA	Lhx1os	ENSMUST00000134800	lincRNA		11	1	84525660	524
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000146485	protein_coding		2	1	32237037	805
ENSMUSG00000097113	lincRNA	Gm19705	ENSMUST00000181491	lincRNA		1	1	136676473	678
ENSMUSG00000075327	protein_coding	Zbtb2	ENSMUST00000215860	retained_intron		10	-1	4373875	6794
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000154653	processed_transcript		2	1	48949518	621
ENSMUSG00000026288	protein_coding	Inpp5d	ENSMUST00000163548	processed_transcript		1	1	87709341	577
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000123740	protein_coding		2	1	32237339	750
ENSMUSG00000104699	processed_pseudogene	Rps4x-ps	ENSMUST00000199852	processed_pseudogene		5	1	3875362	793
ENSMUSG00000087211	lincRNA	Lhx1os	ENSMUST00000126072	lincRNA		11	1	84525669	589
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000132516	nonsense_mediated_decay		2	1	32244359	827
ENSMUSG00000001804	protein_coding	Dsg4	ENSMUST00000019426	protein_coding	principal1	18	1	20436175	3478
ENSMUSG00000026281	protein_coding	Dtymk	ENSMUST00000027503	protein_coding	principal1	1	-1	93801934	1003
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000132853	retained_intron		2	1	32245290	654
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000138000	retained_intron		2	1	32247573	878
ENSMUSG00000087211	lincRNA	Lhx1os	ENSMUST00000128121	lincRNA		11	1	84525684	599
ENSMUSG00000097113	lincRNA	Gm19705	ENSMUST00000181524	lincRNA		1	1	136683396	413
ENSMUSG00000097113	lincRNA	Gm19705	ENSMUST00000180962	lincRNA		1	1	136683629	408
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000192998	nonsense_mediated_decay		2	1	32248663	703
ENSMUSG00000084360	processed_pseudogene	Gm11797	ENSMUST00000121336	processed_pseudogene		4	1	6069874	754
ENSMUSG00000026281	protein_coding	Dtymk	ENSMUST00000112893	protein_coding		1	-1	93799001	1040
ENSMUSG00000100339	unprocessed_pseudogene	Gm21864	ENSMUST00000187269	unprocessed_pseudogene		Y	-1	83288579	696
ENSMUSG00000039254	protein_coding	Pomt1	ENSMUST00000151598	retained_intron		2	1	32251273	870
ENSMUSG00000026281	protein_coding	Dtymk	ENSMUST00000144106	processed_transcript		1	-1	93799361	677
ENSMUSG00000085044	lincRNA	1700109G15Rik	ENSMUST00000150735	lincRNA		11	-1	84720432	384
ENSMUSG00000061525	protein_coding	4921509C19Rik	ENSMUST00000080132	protein_coding	principal1	2	-1	151476153	2684
ENSMUSG00000068617	protein_coding	Efcab1	ENSMUST00000090277	protein_coding	principal1	16	1	14906637	2752
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000151497	processed_transcript		11	-1	5078521	405
ENSMUSG00000099546	unprocessed_pseudogene	Gm21802	ENSMUST00000190593	unprocessed_pseudogene		Y	-1	83362381	696
ENSMUSG00000068617	protein_coding	Efcab1	ENSMUST00000229121	nonsense_mediated_decay		16	1	14906665	1430
ENSMUSG00000026147	protein_coding	Col9a1	ENSMUST00000054588	protein_coding	principal3	1	1	24177610	3834
ENSMUSG00000117480	processed_pseudogene	Gm5688	ENSMUST00000234005	processed_pseudogene		18	1	20499315	1273
ENSMUSG00000050772	protein_coding	Olfr1124	ENSMUST00000215909	protein_coding	principal1	2	1	87430275	2422
ENSMUSG00000116324	antisense	Gm33696	ENSMUST00000229379	antisense		16	-1	14991883	515
ENSMUSG00000068587	protein_coding	Mgam	ENSMUST00000202636	protein_coding		6	1	40628831	1102
ENSMUSG00000050772	protein_coding	Olfr1124	ENSMUST00000062494	protein_coding	principal1	2	1	87434489	957
ENSMUSG00000026281	protein_coding	Dtymk	ENSMUST00000112890	protein_coding		1	-1	93801906	1055
ENSMUSG00000101416	lincRNA	Gm29318	ENSMUST00000185308	lincRNA		13	1	79285712	975
ENSMUSG00000102355	TEC	Gm38349	ENSMUST00000195732	TEC		13	-1	79295339	462
ENSMUSG00000108972	processed_pseudogene	Gm7675	ENSMUST00000208828	processed_pseudogene		7	1	71696714	686
ENSMUSG00000026147	protein_coding	Col9a1	ENSMUST00000088349	protein_coding	alternative2	1	1	24195187	3059
ENSMUSG00000030729	protein_coding	Pgm2l1	ENSMUST00000084935	protein_coding	principal1	7	1	100227394	8834
ENSMUSG00000109388	TEC	Gm44688	ENSMUST00000209083	TEC		7	1	71706076	537
ENSMUSG00000114874	processed_pseudogene	Gm48470	ENSMUST00000225975	processed_pseudogene		13	-1	79441407	265
ENSMUSG00000025216	protein_coding	Lbx1	ENSMUST00000099401	protein_coding	principal1	19	-1	45235812	2484
ENSMUSG00000030729	protein_coding	Pgm2l1	ENSMUST00000208158	retained_intron		7	1	100227676	1551
ENSMUSG00000108982	processed_pseudogene	Gm17988	ENSMUST00000208796	processed_pseudogene		7	1	71717837	535
ENSMUSG00000114505	processed_pseudogene	Gm48471	ENSMUST00000223593	processed_pseudogene		13	1	79838077	767
ENSMUSG00000020928	protein_coding	Higd1b	ENSMUST00000107073	protein_coding	principal1	11	1	102835849	530
ENSMUSG00000031118	protein_coding	1700080O16Rik	ENSMUST00000033449	protein_coding	principal1	X	-1	51972772	1454
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000238044	lincRNA		19	-1	45304183	678
ENSMUSG00000108669	lincRNA	4930441H08Rik	ENSMUST00000205699	lincRNA		7	1	71909693	501
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000235789	lincRNA		19	-1	45338319	1135
ENSMUSG00000030729	protein_coding	Pgm2l1	ENSMUST00000162108	nonsense_mediated_decay		7	1	100227688	2433
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000189827	lincRNA		19	-1	45338307	725
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000187954	lincRNA		19	-1	45303337	762
ENSMUSG00000026147	protein_coding	Col9a1	ENSMUST00000124600	processed_transcript		1	1	24197017	898
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000186981	lincRNA		19	-1	45338319	623
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000236811	lincRNA		19	-1	45311090	797
ENSMUSG00000026147	protein_coding	Col9a1	ENSMUST00000147902	processed_transcript		1	1	24229517	806
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000236436	lincRNA		19	-1	45338383	1268
ENSMUSG00000030729	protein_coding	Pgm2l1	ENSMUST00000054436	nonsense_mediated_decay		7	1	100227710	4060
ENSMUSG00000020928	protein_coding	Higd1b	ENSMUST00000021302	protein_coding	principal1	11	1	102836296	735
ENSMUSG00000089987	processed_pseudogene	Gpx2-ps1	ENSMUST00000160622	processed_pseudogene		7	1	100264675	571
ENSMUSG00000100168	lincRNA	Gm28526	ENSMUST00000187731	lincRNA		13	-1	80130468	419
ENSMUSG00000031118	protein_coding	1700080O16Rik	ENSMUST00000114866	protein_coding	principal1	X	-1	51971047	1232
ENSMUSG00000114222	processed_pseudogene	Gm19320	ENSMUST00000226041	processed_pseudogene		13	1	79878462	473
ENSMUSG00000043019	protein_coding	Edem3	ENSMUST00000188145	protein_coding		1	1	151755371	3262
ENSMUSG00000114287	processed_pseudogene	Gm5197	ENSMUST00000224279	processed_pseudogene		13	-1	80099418	1197
ENSMUSG00000020928	protein_coding	Higd1b	ENSMUST00000107072	protein_coding	principal1	11	1	102836446	497
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000189196	lincRNA		19	-1	45338323	1470
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000187795	lincRNA		19	-1	45330394	664
ENSMUSG00000097196	lincRNA	Gm26665	ENSMUST00000181378	lincRNA		1	1	166002960	839
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000187727	lincRNA		19	-1	45338309	2698
ENSMUSG00000102890	processed_pseudogene	Gm7626	ENSMUST00000195801	processed_pseudogene		1	-1	166043691	353
ENSMUSG00000100417	lincRNA	Gm28578	ENSMUST00000235311	lincRNA		19	-1	45338435	1035
ENSMUSG00000043019	protein_coding	Edem3	ENSMUST00000059498	protein_coding	principal1	1	1	151755374	6327
ENSMUSG00000102057	lincRNA	Gm29594	ENSMUST00000191181	lincRNA		19	1	45317893	398
ENSMUSG00000099511	processed_pseudogene	Topbp1-ps1	ENSMUST00000187120	processed_pseudogene		7	-1	41294312	184
ENSMUSG00000056596	protein_coding	Trnp1	ENSMUST00000125541	protein_coding	principal1	4	-1	133498550	1654
ENSMUSG00000092031	unprocessed_pseudogene	Gm2108	ENSMUST00000165058	unprocessed_pseudogene		7	1	41304335	2177
ENSMUSG00000102484	lincRNA	Gm37923	ENSMUST00000191624	lincRNA		1	1	166092415	161
ENSMUSG00000043019	protein_coding	Edem3	ENSMUST00000187951	protein_coding		1	1	151755460	3115
ENSMUSG00000043019	protein_coding	Edem3	ENSMUST00000191070	protein_coding		1	1	151755460	3127
ENSMUSG00000049119	protein_coding	Fam110b	ENSMUST00000054857	protein_coding	principal1	4	1	5644121	3210
ENSMUSG00000056596	protein_coding	Trnp1	ENSMUST00000123169	processed_transcript		4	-1	133497719	687
ENSMUSG00000025017	protein_coding	Pik3ap1	ENSMUST00000059672	protein_coding	principal1	19	-1	41385096	4482
ENSMUSG00000024561	protein_coding	Mbd1	ENSMUST00000224907	retained_intron		18	1	74267605	1349
ENSMUSG00000023132	protein_coding	Gzma	ENSMUST00000224282	protein_coding	alternative2	13	-1	113100971	996
ENSMUSG00000049119	protein_coding	Fam110b	ENSMUST00000108380	protein_coding	principal1	4	1	5724312	3119
ENSMUSG00000049119	protein_coding	Fam110b	ENSMUST00000144605	retained_intron		4	1	5644125	4239
ENSMUSG00000025017	protein_coding	Pik3ap1	ENSMUST00000235978	retained_intron		19	-1	41385102	2691
ENSMUSG00000100639	unprocessed_pseudogene	Scgb1b6-ps	ENSMUST00000185337	unprocessed_pseudogene		7	1	31625788	199
ENSMUSG00000049119	protein_coding	Fam110b	ENSMUST00000126564	processed_transcript		4	1	5644235	850
ENSMUSG00000023132	protein_coding	Gzma	ENSMUST00000023897	protein_coding	principal2	13	-1	113100981	878
ENSMUSG00000101545	processed_pseudogene	Gm4373	ENSMUST00000178571	processed_pseudogene		7	1	31652395	556
ENSMUSG00000049119	protein_coding	Fam110b	ENSMUST00000124256	processed_transcript		4	1	5644090	618
ENSMUSG00000087407	lincRNA	Gm11431	ENSMUST00000155046	lincRNA		11	-1	84777829	428
ENSMUSG00000049119	protein_coding	Fam110b	ENSMUST00000141479	processed_transcript		4	1	5644190	573
ENSMUSG00000062373	protein_coding	Tmem65	ENSMUST00000072113	protein_coding	principal1	15	-1	58823530	3747
ENSMUSG00000049119	protein_coding	Fam110b	ENSMUST00000156582	protein_coding		4	1	5772879	653
ENSMUSG00000051002	processed_pseudogene	Gm9848	ENSMUST00000053398	processed_pseudogene		13	1	113108073	259
ENSMUSG00000049119	protein_coding	Fam110b	ENSMUST00000145365	processed_transcript		4	1	5798084	362
ENSMUSG00000049119	protein_coding	Fam110b	ENSMUST00000171403	protein_coding	principal1	4	1	5772879	1754
ENSMUSG00000062373	protein_coding	Tmem65	ENSMUST00000226578	retained_intron		15	-1	58823638	3247
ENSMUSG00000083232	processed_pseudogene	Gm11796	ENSMUST00000120208	processed_pseudogene		4	-1	5855487	972
ENSMUSG00000058194	protein_coding	Olfr1126	ENSMUST00000213366	protein_coding	principal1	2	1	87453962	1827
ENSMUSG00000058194	protein_coding	Olfr1126	ENSMUST00000071355	protein_coding	principal1	2	1	87457167	945
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000112754	protein_coding	alternative2	2	1	48949523	5978
ENSMUSG00000031119	protein_coding	Gpc4	ENSMUST00000033450	protein_coding	principal1	X	-1	52165252	2651
ENSMUSG00000114333	lincRNA	1700084D21Rik	ENSMUST00000226043	lincRNA		13	1	113136083	444
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000142250	processed_transcript		2	1	48949962	3401
ENSMUSG00000095123	lincRNA	Gm21781	ENSMUST00000178920	lincRNA		10	1	4391587	4838
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000148796	processed_transcript		2	1	48949963	608
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000127085	processed_transcript		2	1	48950065	501
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000147055	processed_transcript		2	1	48950143	713
ENSMUSG00000050132	protein_coding	Sarm1	ENSMUST00000108287	protein_coding		11	-1	78497458	4868
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000147023	processed_transcript		2	1	48950149	351
ENSMUSG00000030200	protein_coding	Bcl2l14	ENSMUST00000032321	protein_coding	principal1	6	1	134396318	2243
ENSMUSG00000050132	protein_coding	Sarm1	ENSMUST00000153534	retained_intron		11	-1	78483798	2497
ENSMUSG00000030200	protein_coding	Bcl2l14	ENSMUST00000139183	processed_transcript		6	1	134396345	767
ENSMUSG00000040429	protein_coding	Mterf1a	ENSMUST00000044746	protein_coding	principal1	5	-1	3893933	1376
ENSMUSG00000060002	protein_coding	Chpt1	ENSMUST00000117440	protein_coding	alternative2	10	-1	88504073	4863
ENSMUSG00000030200	protein_coding	Bcl2l14	ENSMUST00000127865	protein_coding		6	1	134398652	578
ENSMUSG00000040429	protein_coding	Mterf1a	ENSMUST00000117463	protein_coding	principal1	5	-1	3893907	2413
ENSMUSG00000028533	protein_coding	Izumo3	ENSMUST00000143542	protein_coding		4	-1	92147234	790
ENSMUSG00000040429	protein_coding	Mterf1a	ENSMUST00000196417	processed_transcript		5	-1	3893896	1790
ENSMUSG00000030200	protein_coding	Bcl2l14	ENSMUST00000111960	protein_coding	principal1	6	1	134414428	1578
ENSMUSG00000031853	protein_coding	Map3k21	ENSMUST00000034316	protein_coding	principal1	8	1	125910450	5693
ENSMUSG00000041777	protein_coding	Cir1	ENSMUST00000058615	protein_coding	principal1	2	-1	73312701	2821
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000047413	protein_coding	principal3	2	1	49245969	8543
ENSMUSG00000060002	protein_coding	Chpt1	ENSMUST00000126074	nonsense_mediated_decay		10	-1	88503999	1911
ENSMUSG00000028533	protein_coding	Izumo3	ENSMUST00000107108	protein_coding	principal1	4	-1	92147221	1252
ENSMUSG00000030200	protein_coding	Bcl2l14	ENSMUST00000142612	retained_intron		6	1	134414465	1833
ENSMUSG00000050132	protein_coding	Sarm1	ENSMUST00000061174	protein_coding	principal1	11	-1	78497754	4083
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000199257	protein_coding		2	1	49246170	360
ENSMUSG00000026564	protein_coding	Dusp27	ENSMUST00000192369	protein_coding	principal1	1	-1	166127922	4045
ENSMUSG00000060002	protein_coding	Chpt1	ENSMUST00000143108	nonsense_mediated_decay		10	-1	88503753	3708
ENSMUSG00000081070	processed_pseudogene	Gm13181	ENSMUST00000120117	processed_pseudogene		2	1	3686362	1069
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000122841	protein_coding		2	1	49256561	3742
ENSMUSG00000102041	processed_pseudogene	Rpl23a-ps9	ENSMUST00000188369	processed_pseudogene		7	1	31679593	463
ENSMUSG00000080703	processed_pseudogene	Gm13183	ENSMUST00000118615	processed_pseudogene		2	-1	3680590	789
ENSMUSG00000030200	protein_coding	Bcl2l14	ENSMUST00000163589	protein_coding	principal1	6	1	134398640	2131
ENSMUSG00000050132	protein_coding	Sarm1	ENSMUST00000170674	retained_intron		11	-1	78487295	689
ENSMUSG00000041777	protein_coding	Cir1	ENSMUST00000136519	retained_intron		2	-1	73312567	1113
ENSMUSG00000050132	protein_coding	Sarm1	ENSMUST00000130955	processed_transcript		11	-1	78497686	702
ENSMUSG00000107767	lincRNA	Gm44448	ENSMUST00000205104	lincRNA		6	-1	134424353	393
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000132717	nonsense_mediated_decay		2	1	49272184	6197
ENSMUSG00000108163	processed_pseudogene	Gm44431	ENSMUST00000203500	processed_pseudogene		6	1	126336867	413
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000196045	nonsense_mediated_decay		2	1	49279474	785
ENSMUSG00000060002	protein_coding	Chpt1	ENSMUST00000020253	protein_coding	principal3	10	-1	88503970	3898
ENSMUSG00000026564	protein_coding	Dusp27	ENSMUST00000085992	protein_coding	principal1	1	-1	166127896	4018
ENSMUSG00000028433	protein_coding	Ubap2	ENSMUST00000108068	protein_coding	alternative2	4	-1	41275144	4380
ENSMUSG00000032818	protein_coding	Loxhd1	ENSMUST00000096547	protein_coding	principal2	18	1	77281958	6592
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000197712	nonsense_mediated_decay		2	1	49279475	928
ENSMUSG00000107666	antisense	4933406J09Rik	ENSMUST00000203352	antisense		6	-1	134403415	1505
ENSMUSG00000036792	protein_coding	Mbd5	ENSMUST00000196831	protein_coding		2	1	49279623	660
ENSMUSG00000032818	protein_coding	Loxhd1	ENSMUST00000148341	protein_coding	alternative2	18	1	77281958	7036
ENSMUSG00000060002	protein_coding	Chpt1	ENSMUST00000139109	nonsense_mediated_decay		10	-1	88503889	1447
ENSMUSG00000060002	protein_coding	Chpt1	ENSMUST00000117579	protein_coding	alternative2	10	-1	88503918	1043
ENSMUSG00000028433	protein_coding	Ubap2	ENSMUST00000134782	protein_coding		4	-1	41251619	735
ENSMUSG00000003808	protein_coding	Farsa	ENSMUST00000003906	protein_coding	principal2	8	1	84856989	1826
ENSMUSG00000060002	protein_coding	Chpt1	ENSMUST00000073783	protein_coding	alternative2	10	-1	88503925	852
ENSMUSG00000032818	protein_coding	Loxhd1	ENSMUST00000123410	protein_coding	alternative2	18	1	77281958	6257
ENSMUSG00000047976	protein_coding	Kcna1	ENSMUST00000055168	protein_coding	principal1	6	-1	126644796	4031
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000192949	protein_coding		2	-1	11554077	4801
ENSMUSG00000028433	protein_coding	Ubap2	ENSMUST00000132499	processed_transcript		4	-1	41275116	687
ENSMUSG00000047976	protein_coding	Kcna1	ENSMUST00000203094	protein_coding	principal1	6	-1	126644813	3150
ENSMUSG00000028433	protein_coding	Ubap2	ENSMUST00000143552	processed_transcript		4	-1	41200077	502
ENSMUSG00000039483	protein_coding	Asb6	ENSMUST00000148036	retained_intron		2	-1	30828254	2792
ENSMUSG00000028433	protein_coding	Ubap2	ENSMUST00000136057	protein_coding		4	-1	41195765	418
ENSMUSG00000028433	protein_coding	Ubap2	ENSMUST00000135323	protein_coding		4	-1	41213828	696
ENSMUSG00000028433	protein_coding	Ubap2	ENSMUST00000140662	processed_transcript		4	-1	41275127	132
ENSMUSG00000047976	protein_coding	Kcna1	ENSMUST00000205171	processed_transcript		6	-1	126646384	745
ENSMUSG00000110390	lincRNA	Gm45869	ENSMUST00000210335	lincRNA		6	-1	126556169	1704
ENSMUSG00000045534	protein_coding	Kcna5	ENSMUST00000060972	protein_coding	principal1	6	-1	126535412	2862
ENSMUSG00000018405	protein_coding	Mrm1	ENSMUST00000018549	protein_coding	principal1	11	-1	84819515	2477
ENSMUSG00000028433	protein_coding	Ubap2	ENSMUST00000030143	protein_coding	principal2	4	-1	41275135	4368
ENSMUSG00000032818	protein_coding	Loxhd1	ENSMUST00000035501	processed_transcript		18	1	77307750	3814
ENSMUSG00000021203	protein_coding	Otub2	ENSMUST00000101094	protein_coding		12	1	103388682	3228
ENSMUSG00000026655	protein_coding	Fam107b	ENSMUST00000226435	protein_coding		2	1	3570488	3602
ENSMUSG00000032818	protein_coding	Loxhd1	ENSMUST00000123166	processed_transcript		18	1	77440696	1852
ENSMUSG00000102771	TEC	Gm33320	ENSMUST00000192232	TEC		6	-1	126554916	530
ENSMUSG00000118108	antisense	Gm50284	ENSMUST00000238018	antisense		18	-1	77298678	938
ENSMUSG00000026655	protein_coding	Fam107b	ENSMUST00000115052	protein_coding		2	1	3613758	861
ENSMUSG00000081866	processed_pseudogene	Gm12401	ENSMUST00000118435	processed_pseudogene		4	1	41252617	228
ENSMUSG00000018405	protein_coding	Mrm1	ENSMUST00000144104	retained_intron		11	-1	84815390	549
ENSMUSG00000018405	protein_coding	Mrm1	ENSMUST00000139076	processed_transcript		11	-1	84818734	173
ENSMUSG00000003808	protein_coding	Farsa	ENSMUST00000129595	retained_intron		8	1	84856995	1920
ENSMUSG00000068587	protein_coding	Mgam	ENSMUST00000201148	protein_coding		6	1	40628831	6488
ENSMUSG00000021203	protein_coding	Otub2	ENSMUST00000021620	protein_coding	principal1	12	1	103388698	2791
ENSMUSG00000003808	protein_coding	Farsa	ENSMUST00000144404	retained_intron		8	1	84857009	3341
ENSMUSG00000003808	protein_coding	Farsa	ENSMUST00000109754	protein_coding	alternative1	8	1	84857017	1795
ENSMUSG00000027790	protein_coding	Sis	ENSMUST00000167334	protein_coding	principal1	3	-1	72967863	5953
ENSMUSG00000021203	protein_coding	Otub2	ENSMUST00000141055	retained_intron		12	1	103388766	3055
ENSMUSG00000035201	protein_coding	B020004J07Rik	ENSMUST00000106919	protein_coding	principal1	4	-1	101844023	1976
ENSMUSG00000021203	protein_coding	Otub2	ENSMUST00000148371	protein_coding		12	1	103388985	424
ENSMUSG00000023959	protein_coding	Clic5	ENSMUST00000239215	protein_coding		17	1	44134768	2434
ENSMUSG00000003808	protein_coding	Farsa	ENSMUST00000156970	nonsense_mediated_decay		8	1	84857020	1708
ENSMUSG00000021203	protein_coding	Otub2	ENSMUST00000179684	protein_coding		12	1	103392654	2890
ENSMUSG00000027790	protein_coding	Sis	ENSMUST00000191870	retained_intron		3	-1	72951709	1150
ENSMUSG00000035201	protein_coding	B020004J07Rik	ENSMUST00000084386	protein_coding	principal1	4	-1	101838139	1695
ENSMUSG00000003808	protein_coding	Farsa	ENSMUST00000141480	retained_intron		8	1	84867563	730
ENSMUSG00000089634	processed_pseudogene	Nat8b-ps	ENSMUST00000162660	processed_pseudogene		6	-1	85933379	699
ENSMUSG00000027790	protein_coding	Sis	ENSMUST00000170445	retained_intron		3	-1	72967860	772
ENSMUSG00000023959	protein_coding	Clic5	ENSMUST00000024755	protein_coding	principal1	17	1	44188584	5862
ENSMUSG00000107203	processed_pseudogene	Gm7542	ENSMUST00000201140	processed_pseudogene		6	1	85938439	777
ENSMUSG00000081121	processed_pseudogene	Gm12791	ENSMUST00000120788	processed_pseudogene		4	1	101875347	655
ENSMUSG00000027790	protein_coding	Sis	ENSMUST00000094190	protein_coding	principal1	3	-1	72966866	5887
ENSMUSG00000026655	protein_coding	Fam107b	ENSMUST00000115055	protein_coding	principal1	2	1	3704013	515
ENSMUSG00000081045	unprocessed_pseudogene	Gm12797	ENSMUST00000118645	unprocessed_pseudogene		4	1	101884040	273
ENSMUSG00000108480	lincRNA	Gm36633	ENSMUST00000205873	lincRNA		7	-1	71962018	647
ENSMUSG00000023959	protein_coding	Clic5	ENSMUST00000233193	retained_intron		17	1	44237106	3263
ENSMUSG00000026655	protein_coding	Fam107b	ENSMUST00000115054	protein_coding	principal1	2	1	3704807	601
ENSMUSG00000108800	lincRNA	1700011C11Rik	ENSMUST00000205268	lincRNA		7	1	71961173	365
ENSMUSG00000026655	protein_coding	Fam107b	ENSMUST00000027965	protein_coding	principal1	2	1	3713458	3156
ENSMUSG00000114462	processed_pseudogene	Gm8371	ENSMUST00000226097	processed_pseudogene		13	1	80161328	552
ENSMUSG00000068587	protein_coding	Mgam	ENSMUST00000238599	protein_coding	principal1	6	1	40642979	10851
ENSMUSG00000114528	processed_pseudogene	Gm46388	ENSMUST00000223876	processed_pseudogene		13	1	80493009	476
ENSMUSG00000068587	protein_coding	Mgam	ENSMUST00000202966	protein_coding		6	1	40671894	2959
ENSMUSG00000026655	protein_coding	Fam107b	ENSMUST00000115053	protein_coding	principal1	2	1	3713478	688
ENSMUSG00000068587	protein_coding	Mgam	ENSMUST00000202779	protein_coding		6	1	40728952	3821
ENSMUSG00000026655	protein_coding	Fam107b	ENSMUST00000177125	nonsense_mediated_decay		2	1	3713478	913
ENSMUSG00000068587	protein_coding	Mgam	ENSMUST00000202775	processed_transcript		6	1	40749024	522
ENSMUSG00000026655	protein_coding	Fam107b	ENSMUST00000177037	protein_coding		2	1	3770708	230
ENSMUSG00000068587	protein_coding	Mgam	ENSMUST00000202311	processed_transcript		6	1	40749476	372
ENSMUSG00000068587	protein_coding	Mgam	ENSMUST00000071535	protein_coding		6	1	40628831	6488
ENSMUSG00000026655	protein_coding	Fam107b	ENSMUST00000176254	protein_coding		2	1	3773946	300
ENSMUSG00000085205	antisense	Gm13185	ENSMUST00000131044	antisense		2	-1	3755177	944
ENSMUSG00000020059	protein_coding	Sycp3	ENSMUST00000020252	protein_coding	principal2	10	1	88459569	1139
ENSMUSG00000021319	protein_coding	Sfrp4	ENSMUST00000222464	protein_coding		13	1	19623104	4049
ENSMUSG00000052155	protein_coding	Acvr2a	ENSMUST00000063886	protein_coding	principal1	2	1	48814109	5686
ENSMUSG00000047518	protein_coding	Slfnl1	ENSMUST00000062990	protein_coding	principal1	4	1	120532231	1762
ENSMUSG00000008226	protein_coding	Scrn3	ENSMUST00000090811	protein_coding	principal2	2	1	73312601	3309
ENSMUSG00000031171	protein_coding	Ftsj1	ENSMUST00000033513	protein_coding	principal3	X	-1	8252406	3425
ENSMUSG00000020059	protein_coding	Sycp3	ENSMUST00000123244	nonsense_mediated_decay		10	1	88459664	927
ENSMUSG00000020059	protein_coding	Sycp3	ENSMUST00000125612	protein_coding	alternative2	10	1	88459664	1169
ENSMUSG00000032125	protein_coding	Robo4	ENSMUST00000214185	protein_coding	alternative2	9	1	37401897	4952
ENSMUSG00000039483	protein_coding	Asb6	ENSMUST00000041726	protein_coding	principal1	2	-1	30830333	4147
ENSMUSG00000052155	protein_coding	Acvr2a	ENSMUST00000156681	processed_transcript		2	1	48890389	1252
ENSMUSG00000081272	processed_pseudogene	Ap2m1-ps	ENSMUST00000119733	processed_pseudogene		2	1	49308155	1308
ENSMUSG00000032125	protein_coding	Robo4	ENSMUST00000115048	protein_coding		9	1	37402032	3392
ENSMUSG00000105881	lincRNA	4932422M17Rik	ENSMUST00000195992	lincRNA		5	1	123138931	2639
ENSMUSG00000039483	protein_coding	Asb6	ENSMUST00000129628	nonsense_mediated_decay		2	-1	30828265	784
ENSMUSG00000032125	protein_coding	Robo4	ENSMUST00000115046	protein_coding	alternative2	9	1	37402033	3878
ENSMUSG00000038665	protein_coding	Dgki	ENSMUST00000101532	protein_coding	principal3	6	-1	37299974	4596
ENSMUSG00000008226	protein_coding	Scrn3	ENSMUST00000112050	protein_coding	alternative2	2	1	73312654	1897
ENSMUSG00000084304	processed_pseudogene	Gm6142	ENSMUST00000120290	processed_pseudogene		16	-1	4320680	325
ENSMUSG00000090086	lincRNA	AI480526	ENSMUST00000159072	lincRNA		5	-1	123138109	957
ENSMUSG00000031171	protein_coding	Ftsj1	ENSMUST00000115594	protein_coding		X	-1	8252310	1529
ENSMUSG00000031171	protein_coding	Ftsj1	ENSMUST00000115595	protein_coding	alternative2	X	-1	8252395	1656
ENSMUSG00000008226	protein_coding	Scrn3	ENSMUST00000155019	processed_transcript		2	1	73312659	425
ENSMUSG00000039483	protein_coding	Asb6	ENSMUST00000144330	retained_intron		2	-1	30828291	1000
ENSMUSG00000021319	protein_coding	Sfrp4	ENSMUST00000002883	protein_coding	principal1	13	1	19623175	1764
ENSMUSG00000090086	lincRNA	AI480526	ENSMUST00000160227	lincRNA		5	-1	123139347	632
ENSMUSG00000039483	protein_coding	Asb6	ENSMUST00000147414	retained_intron		2	-1	30827494	780
ENSMUSG00000021319	protein_coding	Sfrp4	ENSMUST00000221810	protein_coding		13	1	19623813	1165
ENSMUSG00000021319	protein_coding	Sfrp4	ENSMUST00000222992	protein_coding		13	1	19624755	1062
ENSMUSG00000056912	protein_coding	1700017N19Rik	ENSMUST00000218464	protein_coding		10	1	100590484	1597
ENSMUSG00000044065	processed_pseudogene	Gm9788	ENSMUST00000057038	processed_pseudogene		19	1	41459813	906
ENSMUSG00000008226	protein_coding	Scrn3	ENSMUST00000154158	processed_transcript		2	1	73312659	658
ENSMUSG00000032125	protein_coding	Robo4	ENSMUST00000102895	protein_coding	alternative2	9	1	37402046	3226
ENSMUSG00000056912	protein_coding	1700017N19Rik	ENSMUST00000188930	protein_coding		10	1	100590511	748
ENSMUSG00000030236	protein_coding	Slco1b2	ENSMUST00000042812	protein_coding	principal2	6	1	141629518	3307
ENSMUSG00000008226	protein_coding	Scrn3	ENSMUST00000139926	processed_transcript		2	1	73312676	611
ENSMUSG00000008226	protein_coding	Scrn3	ENSMUST00000123621	processed_transcript		2	1	73319400	1239
ENSMUSG00000031171	protein_coding	Ftsj1	ENSMUST00000144953	retained_intron		X	-1	8252208	1791
ENSMUSG00000030236	protein_coding	Slco1b2	ENSMUST00000203597	protein_coding	alternative2	6	1	141634458	1965
ENSMUSG00000056912	protein_coding	1700017N19Rik	ENSMUST00000187119	protein_coding		10	1	100592350	1524
ENSMUSG00000110264	lincRNA	E330018M18Rik	ENSMUST00000209455	lincRNA		8	1	47135651	1383
ENSMUSG00000090086	lincRNA	AI480526	ENSMUST00000160321	lincRNA		5	-1	123141076	848
ENSMUSG00000031171	protein_coding	Ftsj1	ENSMUST00000149063	protein_coding		X	-1	8246356	494
ENSMUSG00000032125	protein_coding	Robo4	ENSMUST00000215777	retained_intron		9	1	37412926	530
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000012679	protein_coding	principal1	6	-1	29609887	4251
ENSMUSG00000030236	protein_coding	Slco1b2	ENSMUST00000162675	retained_intron		6	1	141652255	1922
ENSMUSG00000056912	protein_coding	1700017N19Rik	ENSMUST00000188736	protein_coding		10	1	100592370	1709
ENSMUSG00000031171	protein_coding	Ftsj1	ENSMUST00000126924	processed_transcript		X	-1	8245806	599
ENSMUSG00000090086	lincRNA	AI480526	ENSMUST00000160255	lincRNA		5	-1	123141666	1095
ENSMUSG00000032125	protein_coding	Robo4	ENSMUST00000239486	protein_coding	principal2	9	1	37402046	3689
ENSMUSG00000090086	lincRNA	AI480526	ENSMUST00000159637	lincRNA		5	-1	123141089	1697
ENSMUSG00000056912	protein_coding	1700017N19Rik	ENSMUST00000191336	protein_coding		10	1	100592376	831
ENSMUSG00000068859	protein_coding	Sp9	ENSMUST00000090813	protein_coding	principal1	2	1	73271925	4514
ENSMUSG00000030236	protein_coding	Slco1b2	ENSMUST00000160179	retained_intron		6	1	141681246	467
ENSMUSG00000031171	protein_coding	Ftsj1	ENSMUST00000147467	retained_intron		X	-1	8252363	1047
ENSMUSG00000094053	protein_coding	Scgb2b7	ENSMUST00000178258	protein_coding	principal1	7	-1	31705757	520
ENSMUSG00000090086	lincRNA	AI480526	ENSMUST00000160099	lincRNA		5	-1	123140289	1017
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000170647	protein_coding		6	-1	29560094	1664
ENSMUSG00000090086	lincRNA	AI480526	ENSMUST00000162697	lincRNA		5	-1	123141067	410
ENSMUSG00000116741	unprocessed_pseudogene	Gm49564	ENSMUST00000232170	unprocessed_pseudogene		13	-1	113151450	562
ENSMUSG00000082274	processed_pseudogene	Gm14026	ENSMUST00000120625	processed_pseudogene		2	1	129168700	1789
ENSMUSG00000104156	lincRNA	Gm38102	ENSMUST00000196428	lincRNA		5	1	123133939	174
ENSMUSG00000068859	protein_coding	Sp9	ENSMUST00000147133	processed_transcript		2	1	73271966	656
ENSMUSG00000056912	protein_coding	1700017N19Rik	ENSMUST00000186825	nonsense_mediated_decay		10	1	100592381	1810
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000156969	nonsense_mediated_decay		11	-1	6626043	2324
ENSMUSG00000038665	protein_coding	Dgki	ENSMUST00000150300	nonsense_mediated_decay		6	-1	37300184	3874
ENSMUSG00000094053	protein_coding	Scgb2b7	ENSMUST00000188968	retained_intron		7	-1	31705723	646
ENSMUSG00000104156	lincRNA	Gm38102	ENSMUST00000192791	lincRNA		5	1	123135761	1935
ENSMUSG00000038665	protein_coding	Dgki	ENSMUST00000138286	nonsense_mediated_decay		6	-1	37300184	3803
ENSMUSG00000038665	protein_coding	Dgki	ENSMUST00000090314	protein_coding	alternative2	6	-1	37300184	3784
ENSMUSG00000084826	antisense	AI847159	ENSMUST00000148997	antisense		2	-1	129180632	753
ENSMUSG00000038665	protein_coding	Dgki	ENSMUST00000042075	protein_coding	alternative2	6	-1	37299637	3028
ENSMUSG00000084826	antisense	AI847159	ENSMUST00000141786	antisense		2	-1	129180632	915
ENSMUSG00000056912	protein_coding	1700017N19Rik	ENSMUST00000041162	protein_coding		10	1	100592385	1691
ENSMUSG00000048647	protein_coding	Exd1	ENSMUST00000060009	protein_coding	principal1	2	-1	119547627	6042
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000000394	protein_coding	principal1	11	-1	6626043	2290
ENSMUSG00000090363	protein_coding	Gm3512	ENSMUST00000172431	protein_coding	principal1	14	-1	7174533	1861
ENSMUSG00000092365	antisense	BC023719	ENSMUST00000174728	antisense		17	1	36111426	978
ENSMUSG00000002233	protein_coding	Rhoc	ENSMUST00000196817	protein_coding	principal1	3	1	104788375	877
ENSMUSG00000084826	antisense	AI847159	ENSMUST00000137728	antisense		2	-1	129178541	305
ENSMUSG00000048647	protein_coding	Exd1	ENSMUST00000133668	protein_coding		2	-1	119547194	537
ENSMUSG00000090363	protein_coding	Gm3512	ENSMUST00000090663	protein_coding		14	-1	7159273	441
ENSMUSG00000056912	protein_coding	1700017N19Rik	ENSMUST00000190386	protein_coding		10	1	100592396	1483
ENSMUSG00000073405	unprocessed_pseudogene	H2-T-ps	ENSMUST00000172538	unprocessed_pseudogene		17	-1	36111658	1067
ENSMUSG00000021096	protein_coding	Ppm1a	ENSMUST00000221628	nonsense_mediated_decay		12	1	72757455	1486
ENSMUSG00000038665	protein_coding	Dgki	ENSMUST00000143046	processed_transcript		6	-1	37031028	2102
ENSMUSG00000056912	protein_coding	1700017N19Rik	ENSMUST00000190708	protein_coding	principal1	10	1	100592408	1945
ENSMUSG00000084826	antisense	AI847159	ENSMUST00000138431	antisense		2	-1	129180667	952
ENSMUSG00000021096	protein_coding	Ppm1a	ENSMUST00000222790	protein_coding		12	1	72760741	175
ENSMUSG00000056912	protein_coding	1700017N19Rik	ENSMUST00000191033	protein_coding		10	1	100609155	853
ENSMUSG00000048647	protein_coding	Exd1	ENSMUST00000171024	protein_coding	principal1	2	-1	119541513	5290
ENSMUSG00000103911	TEC	Gm38074	ENSMUST00000193467	TEC		4	-1	144958848	145
ENSMUSG00000021096	protein_coding	Ppm1a	ENSMUST00000221502	protein_coding		12	1	72760801	344
ENSMUSG00000095015	protein_coding	Gm16434	ENSMUST00000100888	protein_coding	principal5	14	-1	7194540	2066
ENSMUSG00000002233	protein_coding	Rhoc	ENSMUST00000002303	protein_coding	principal1	3	1	104788888	1202
ENSMUSG00000038665	protein_coding	Dgki	ENSMUST00000146656	processed_transcript		6	-1	37064510	625
ENSMUSG00000116949	processed_pseudogene	Gm7177	ENSMUST00000232517	processed_pseudogene		17	-1	15536704	1640
ENSMUSG00000116968	lincRNA	Gm49587	ENSMUST00000232496	lincRNA		16	1	76383107	1281
ENSMUSG00000095015	protein_coding	Gm16434	ENSMUST00000177712	protein_coding	alternative2	14	-1	7194458	618
ENSMUSG00000092277	protein_coding	Gm19684	ENSMUST00000173128	protein_coding	principal1	17	1	36121678	1611
ENSMUSG00000038665	protein_coding	Dgki	ENSMUST00000136457	processed_transcript		6	-1	37299744	372
ENSMUSG00000050299	processed_pseudogene	Gm9843	ENSMUST00000052867	processed_pseudogene		16	-1	76403652	402
ENSMUSG00000005580	protein_coding	Adcy9	ENSMUST00000117801	protein_coding	principal1	16	-1	4419808	4507
ENSMUSG00000095383	protein_coding	Vmn1r152	ENSMUST00000168326	protein_coding	principal1	7	1	22522967	924
ENSMUSG00000002233	protein_coding	Rhoc	ENSMUST00000106787	protein_coding	principal1	3	1	104789034	959
ENSMUSG00000045281	protein_coding	Gpr20	ENSMUST00000064166	protein_coding	principal1	15	-1	73707505	2144
ENSMUSG00000002233	protein_coding	Rhoc	ENSMUST00000176347	protein_coding		3	1	104789058	583
ENSMUSG00000005580	protein_coding	Adcy9	ENSMUST00000120080	protein_coding		16	-1	4420498	4974
ENSMUSG00000002233	protein_coding	Rhoc	ENSMUST00000199824	protein_coding		3	1	104789228	518
ENSMUSG00000086652	antisense	Gm14029	ENSMUST00000151051	antisense		2	-1	129183947	1348
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000150697	nonsense_mediated_decay		11	-1	6626043	2241
ENSMUSG00000002233	protein_coding	Rhoc	ENSMUST00000132721	retained_intron		3	1	104791983	386
ENSMUSG00000094748	protein_coding	Vmn1r255	ENSMUST00000174637	protein_coding	principal1	7	-1	22534887	924
ENSMUSG00000079491	polymorphic_pseudogene	H2-T10	ENSMUST00000174625	retained_intron		17	-1	36121435	3389
ENSMUSG00000101940	transcribed_unprocessed_pseudogene	Akp-ps1	ENSMUST00000212812	processed_transcript		1	1	87067672	1959
ENSMUSG00000103532	TEC	Gm4430	ENSMUST00000193902	TEC		2	-1	129197126	1041
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000134016	retained_intron		11	-1	6618030	682
ENSMUSG00000117106	lincRNA	Gm49872	ENSMUST00000233110	lincRNA		17	-1	44367903	718
ENSMUSG00000005580	protein_coding	Adcy9	ENSMUST00000005719	protein_coding	principal1	16	-1	4419587	4457
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000131477	processed_transcript		11	-1	6620915	582
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000001109	protein_coding	principal1	5	-1	34637189	1907
ENSMUSG00000101940	transcribed_unprocessed_pseudogene	Akp-ps1	ENSMUST00000188050	transcribed_unprocessed_pseudogene		1	1	87068032	1600
ENSMUSG00000095984	protein_coding	Vmn1r256	ENSMUST00000174775	protein_coding	principal1	7	-1	22565343	921
ENSMUSG00000107696	TEC	Gm44171	ENSMUST00000203701	TEC		6	1	101538753	2109
ENSMUSG00000079491	polymorphic_pseudogene	H2-T10	ENSMUST00000174382	polymorphic_pseudogene		17	-1	36121465	1699
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000132446	retained_intron		11	-1	6620445	602
ENSMUSG00000107738	processed_pseudogene	Gm32453	ENSMUST00000204183	processed_pseudogene		6	1	101652234	456
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000151008	retained_intron		11	-1	6621251	652
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000114331	protein_coding	principal1	5	-1	34637212	1754
ENSMUSG00000109043	processed_pseudogene	Gm18060	ENSMUST00000207407	processed_pseudogene		7	1	22580017	564
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000131313	processed_transcript		11	-1	6621065	380
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000136682	protein_coding		11	-1	6626067	647
ENSMUSG00000109396	protein_coding	Gm4565	ENSMUST00000208134	protein_coding	principal1	7	-1	22588127	1438
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000103152	protein_coding	principal1	11	-1	96916496	2250
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000131815	processed_transcript		11	-1	6626022	853
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000144463	protein_coding		11	-1	6625459	540
ENSMUSG00000053560	protein_coding	Ier2	ENSMUST00000060427	protein_coding	principal1	8	-1	84662854	1524
ENSMUSG00000021096	protein_coding	Ppm1a	ENSMUST00000021514	protein_coding	principal1	12	1	72761211	7668
ENSMUSG00000118487	unitary_pseudogene	Gm50464	ENSMUST00000238703	unitary_pseudogene		8	1	84665445	433
ENSMUSG00000000384	protein_coding	Tbrg4	ENSMUST00000189268	protein_coding	principal1	11	-1	6626067	2347
ENSMUSG00000021096	protein_coding	Ppm1a	ENSMUST00000223410	retained_intron		12	1	72761315	3900
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000134732	nonsense_mediated_decay		11	-1	96916496	2201
ENSMUSG00000037958	protein_coding	Nsrp1	ENSMUST00000102494	protein_coding	principal1	11	-1	77078435	3114
ENSMUSG00000056738	lincRNA	A730036I17Rik	ENSMUST00000143346	lincRNA		2	1	129218969	3431
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000170350	nonsense_mediated_decay		6	-1	29609811	3590
ENSMUSG00000021096	protein_coding	Ppm1a	ENSMUST00000222896	protein_coding		12	1	72783703	1103
ENSMUSG00000056738	lincRNA	A730036I17Rik	ENSMUST00000148548	lincRNA		2	1	129228022	346
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000179584	protein_coding		2	-1	11502101	4756
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000154289	retained_intron		11	-1	96908758	836
ENSMUSG00000079491	polymorphic_pseudogene	H2-T10	ENSMUST00000166442	protein_coding	principal1	17	-1	36121149	1481
ENSMUSG00000056738	lincRNA	A730036I17Rik	ENSMUST00000165505	lincRNA		2	1	129219028	2181
ENSMUSG00000020193	protein_coding	Zpbp	ENSMUST00000020413	protein_coding	principal1	11	-1	11462408	4248
ENSMUSG00000021096	protein_coding	Ppm1a	ENSMUST00000223221	retained_intron		12	1	72786414	531
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000171865	retained_intron		6	-1	29557065	515
ENSMUSG00000037958	protein_coding	Nsrp1	ENSMUST00000127758	protein_coding		11	-1	77078037	290
ENSMUSG00000021096	protein_coding	Ppm1a	ENSMUST00000222920	retained_intron		12	1	72791125	1886
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000169302	retained_intron		6	-1	29609623	2615
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000149033	retained_intron		11	-1	96912869	1207
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000084366	protein_coding		4	-1	109118022	3134
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000201797	retained_intron		6	-1	29571519	3086
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000130347	retained_intron		5	-1	34634727	811
ENSMUSG00000026963	protein_coding	Tmem210	ENSMUST00000028340	protein_coding	principal1	2	1	25288145	516
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000167056	retained_intron		6	-1	29582386	447
ENSMUSG00000020191	protein_coding	Spata48	ENSMUST00000170661	processed_transcript		11	1	11462094	330
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000128670	retained_intron		5	-1	34634629	866
ENSMUSG00000037958	protein_coding	Nsrp1	ENSMUST00000134685	processed_transcript		11	-1	77078435	655
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000127048	protein_coding		11	-1	96916392	768
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000170634	retained_intron		6	-1	29609819	3143
ENSMUSG00000100267	processed_pseudogene	Gm28779	ENSMUST00000189678	processed_pseudogene		1	-1	53362471	323
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000164325	retained_intron		6	-1	29609634	3396
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000156315	protein_coding		11	-1	96916107	566
ENSMUSG00000026963	protein_coding	Tmem210	ENSMUST00000144102	processed_transcript		2	1	25288201	326
ENSMUSG00000109567	processed_pseudogene	Gm18467	ENSMUST00000208805	processed_pseudogene		7	1	22591126	434
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000166844	processed_transcript		6	-1	29609613	456
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000153305	nonsense_mediated_decay		11	-1	96916429	620
ENSMUSG00000109247	unprocessed_pseudogene	Gm8685	ENSMUST00000207567	unprocessed_pseudogene		7	1	22607553	2183
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000028114	protein_coding		2	-1	11502101	4712
ENSMUSG00000012535	protein_coding	Tnpo3	ENSMUST00000115251	protein_coding		6	-1	29609607	3989
ENSMUSG00000054065	protein_coding	Pkp3	ENSMUST00000106039	protein_coding	alternative2	7	1	141078218	2919
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000144731	protein_coding		11	-1	96916366	758
ENSMUSG00000092243	protein_coding	Gm7030	ENSMUST00000173322	protein_coding	principal1	17	-1	36129425	913
ENSMUSG00000041872	protein_coding	Il17f	ENSMUST00000039046	protein_coding	principal1	1	-1	20784270	1178
ENSMUSG00000066107	protein_coding	Gm12666	ENSMUST00000123179	protein_coding	principal1	4	-1	92191749	764
ENSMUSG00000015083	protein_coding	C8g	ENSMUST00000040042	protein_coding	principal3	2	-1	25500613	1150
ENSMUSG00000092243	protein_coding	Gm7030	ENSMUST00000172968	protein_coding	principal1	17	-1	36129425	899
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000114846	protein_coding	principal3	2	-1	11502101	4634
ENSMUSG00000092243	protein_coding	Gm7030	ENSMUST00000046131	protein_coding	principal1	17	-1	36129425	913
ENSMUSG00000015083	protein_coding	C8g	ENSMUST00000015227	protein_coding	alternative2	2	-1	25501719	822
ENSMUSG00000041872	protein_coding	Il17f	ENSMUST00000191111	retained_intron		1	-1	20779554	590
ENSMUSG00000041872	protein_coding	Il17f	ENSMUST00000189301	protein_coding		1	-1	20790617	825
ENSMUSG00000000544	protein_coding	Gpa33	ENSMUST00000060833	protein_coding	principal1	1	1	166130238	2515
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000195779	nonsense_mediated_decay		2	-1	11553922	4001
ENSMUSG00000041872	protein_coding	Il17f	ENSMUST00000190692	processed_transcript		1	-1	20790585	604
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000147573	nonsense_mediated_decay		11	-1	96916414	617
ENSMUSG00000000544	protein_coding	Gpa33	ENSMUST00000166159	protein_coding		1	1	166130340	499
ENSMUSG00000054065	protein_coding	Pkp3	ENSMUST00000159375	protein_coding		7	1	141079147	417
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000114329	protein_coding	principal1	5	-1	34637192	1906
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000130774	protein_coding		11	-1	96916414	488
ENSMUSG00000018669	protein_coding	Cdk5rap3	ENSMUST00000130767	retained_intron		11	-1	96916367	820
ENSMUSG00000027204	protein_coding	Fbn1	ENSMUST00000028633	protein_coding	principal1	2	-1	125506385	9847
ENSMUSG00000054065	protein_coding	Pkp3	ENSMUST00000066873	protein_coding	principal3	7	1	141079760	2848
ENSMUSG00000025188	protein_coding	Hps1	ENSMUST00000162004	protein_coding	principal3	19	-1	42779978	2847
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000194478	protein_coding	alternative1	4	-1	109202234	2903
ENSMUSG00000000544	protein_coding	Gpa33	ENSMUST00000027847	processed_transcript		1	1	166130417	787
ENSMUSG00000020191	protein_coding	Spata48	ENSMUST00000020410	protein_coding	alternative2	11	1	11464256	1430
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000110688	protein_coding	alternative2	8	1	22974844	7206
ENSMUSG00000020432	protein_coding	Tcn2	ENSMUST00000109993	protein_coding	principal1	11	-1	3932159	2027
ENSMUSG00000054065	protein_coding	Pkp3	ENSMUST00000163041	protein_coding		7	1	141079775	866
ENSMUSG00000027204	protein_coding	Fbn1	ENSMUST00000148272	retained_intron		2	-1	125506072	1926
ENSMUSG00000052236	lincRNA	Gm9871	ENSMUST00000204837	lincRNA		6	1	101774249	1560
ENSMUSG00000052236	lincRNA	Gm9871	ENSMUST00000203073	lincRNA		6	1	101782539	873
ENSMUSG00000052236	lincRNA	Gm9871	ENSMUST00000064002	lincRNA		6	1	101796225	327
ENSMUSG00000046671	protein_coding	Mtfr1l	ENSMUST00000102550	protein_coding	principal1	4	-1	134535268	2025
ENSMUSG00000027204	protein_coding	Fbn1	ENSMUST00000103234	protein_coding	principal1	2	-1	125507993	11971
ENSMUSG00000020191	protein_coding	Spata48	ENSMUST00000109678	protein_coding	principal2	11	1	11489266	753
ENSMUSG00000054065	protein_coding	Pkp3	ENSMUST00000160869	nonsense_mediated_decay		7	1	141079780	670
ENSMUSG00000020432	protein_coding	Tcn2	ENSMUST00000109989	protein_coding	principal1	11	-1	3932044	1949
ENSMUSG00000107579	lincRNA	Gm44176	ENSMUST00000204336	lincRNA		6	1	101841195	276
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000160271	protein_coding		4	-1	109118036	2604
ENSMUSG00000015083	protein_coding	C8g	ENSMUST00000149062	processed_transcript		2	-1	25500255	868
ENSMUSG00000025188	protein_coding	Hps1	ENSMUST00000160455	protein_coding	alternative2	19	-1	42779976	2952
ENSMUSG00000054065	protein_coding	Pkp3	ENSMUST00000160615	retained_intron		7	1	141087761	557
ENSMUSG00000081325	processed_pseudogene	Gm12599	ENSMUST00000120534	processed_pseudogene		11	1	11436984	792
ENSMUSG00000053615	antisense	Gm9913	ENSMUST00000066157	antisense		2	1	125505089	2793
ENSMUSG00000078700	processed_transcript	D030028A08Rik	ENSMUST00000131501	processed_transcript		11	1	96916270	3542
ENSMUSG00000015083	protein_coding	C8g	ENSMUST00000154984	processed_transcript		2	-1	25500243	843
ENSMUSG00000107421	TEC	Gm44177	ENSMUST00000204338	TEC		6	1	101913273	2667
ENSMUSG00000020432	protein_coding	Tcn2	ENSMUST00000109990	protein_coding	principal1	11	-1	3931960	1914
ENSMUSG00000000544	protein_coding	Gpa33	ENSMUST00000166860	protein_coding	principal1	1	1	166130467	2227
ENSMUSG00000082875	processed_pseudogene	Gm12598	ENSMUST00000117333	processed_pseudogene		11	1	11312433	830
ENSMUSG00000015083	protein_coding	C8g	ENSMUST00000153139	processed_transcript		2	-1	25500235	508
ENSMUSG00000025188	protein_coding	Hps1	ENSMUST00000069298	protein_coding	alternative2	19	-1	42779965	3196
ENSMUSG00000108177	processed_pseudogene	Gm7924	ENSMUST00000203975	processed_pseudogene		6	1	102071466	785
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000141316	processed_transcript		X	1	42059679	1817
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000225851	processed_transcript		X	1	42059921	284
ENSMUSG00000015083	protein_coding	C8g	ENSMUST00000150580	processed_transcript		2	-1	25499502	565
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000224454	protein_coding		X	1	42060394	693
ENSMUSG00000015083	protein_coding	C8g	ENSMUST00000133255	processed_transcript		2	-1	25500114	415
ENSMUSG00000020432	protein_coding	Tcn2	ENSMUST00000109992	protein_coding	principal1	11	-1	3931789	1945
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000137150	nonsense_mediated_decay		5	-1	34636807	1485
ENSMUSG00000054065	protein_coding	Pkp3	ENSMUST00000160403	retained_intron		7	1	141088146	1425
ENSMUSG00000097448	lincRNA	Platr22	ENSMUST00000181274	lincRNA		1	1	136696211	1617
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000160774	protein_coding		4	-1	109202217	2765
ENSMUSG00000054065	protein_coding	Pkp3	ENSMUST00000159253	retained_intron		7	1	141088208	458
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000136010	retained_intron		5	-1	34634891	630
ENSMUSG00000054065	protein_coding	Pkp3	ENSMUST00000161142	retained_intron		7	1	141089411	412
ENSMUSG00000061490	processed_pseudogene	Ube2d4	ENSMUST00000075109	processed_pseudogene		15	-1	58847321	406
ENSMUSG00000020432	protein_coding	Tcn2	ENSMUST00000109991	protein_coding	principal1	11	-1	3932078	1943
ENSMUSG00000086704	antisense	Gm14582	ENSMUST00000141697	antisense		X	1	52296181	1189
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000148270	retained_intron		5	-1	34636124	1155
ENSMUSG00000078700	processed_transcript	D030028A08Rik	ENSMUST00000135825	processed_transcript		11	1	96944165	2801
ENSMUSG00000020432	protein_coding	Tcn2	ENSMUST00000020710	protein_coding	principal1	11	-1	3931995	1897
ENSMUSG00000046671	protein_coding	Mtfr1l	ENSMUST00000131613	nonsense_mediated_decay		4	-1	134535298	1768
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000202378	nonsense_mediated_decay		5	-1	34635525	549
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000202065	protein_coding		5	-1	34635065	136
ENSMUSG00000020432	protein_coding	Tcn2	ENSMUST00000109988	protein_coding	principal1	11	-1	3931804	1957
ENSMUSG00000024913	protein_coding	Lrp5	ENSMUST00000025856	protein_coding	principal1	19	-1	3686556	5161
ENSMUSG00000078700	processed_transcript	D030028A08Rik	ENSMUST00000107628	processed_transcript		11	1	96944189	1216
ENSMUSG00000046671	protein_coding	Mtfr1l	ENSMUST00000130187	retained_intron		4	-1	134535258	4085
ENSMUSG00000078700	processed_transcript	D030028A08Rik	ENSMUST00000186326	processed_transcript		11	1	96944312	959
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000134156	nonsense_mediated_decay		5	-1	34636116	830
ENSMUSG00000108582	processed_pseudogene	Gm18973	ENSMUST00000205814	processed_pseudogene		7	-1	4613165	511
ENSMUSG00000046671	protein_coding	Mtfr1l	ENSMUST00000154769	protein_coding		4	-1	134535096	1014
ENSMUSG00000047040	protein_coding	Prr15l	ENSMUST00000132865	processed_transcript		11	1	96928104	423
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000201147	protein_coding		5	-1	34635755	391
ENSMUSG00000024561	protein_coding	Mbd1	ENSMUST00000239157	protein_coding		18	1	74268175	2908
ENSMUSG00000046671	protein_coding	Mtfr1l	ENSMUST00000146808	protein_coding		4	-1	134535387	925
ENSMUSG00000024561	protein_coding	Mbd1	ENSMUST00000097530	protein_coding		18	1	74268175	2833
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000150086	processed_transcript		2	-1	11498385	1736
ENSMUSG00000037542	protein_coding	Aldh8a1	ENSMUST00000042699	protein_coding	principal1	10	1	21377291	2259
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000155577	protein_coding		5	-1	34637189	946
ENSMUSG00000047040	protein_coding	Prr15l	ENSMUST00000054311	protein_coding	principal1	11	1	96929302	1342
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000149657	protein_coding		5	-1	34636841	873
ENSMUSG00000046671	protein_coding	Mtfr1l	ENSMUST00000129836	retained_intron		4	-1	134535044	1048
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000137506	protein_coding		5	-1	34635623	341
ENSMUSG00000045282	protein_coding	Tmem86b	ENSMUST00000055085	protein_coding	principal1	7	-1	4630482	1222
ENSMUSG00000046671	protein_coding	Mtfr1l	ENSMUST00000116279	protein_coding	principal1	4	-1	134535387	1969
ENSMUSG00000037542	protein_coding	Aldh8a1	ENSMUST00000161285	retained_intron		10	1	21377300	2704
ENSMUSG00000024561	protein_coding	Mbd1	ENSMUST00000224159	retained_intron		18	1	74268290	1145
ENSMUSG00000037542	protein_coding	Aldh8a1	ENSMUST00000159163	processed_transcript		10	1	21377347	645
ENSMUSG00000112405	processed_pseudogene	Fkbp1a-ps2	ENSMUST00000219474	processed_pseudogene		10	-1	21410573	311
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000200717	retained_intron		5	-1	34635501	414
ENSMUSG00000024561	protein_coding	Mbd1	ENSMUST00000224047	protein_coding	principal1	18	1	74268291	2838
ENSMUSG00000045282	protein_coding	Tmem86b	ENSMUST00000205360	protein_coding		7	-1	4630187	1344
ENSMUSG00000027397	protein_coding	Slc20a1	ENSMUST00000028880	protein_coding	principal1	2	1	129198764	3316
ENSMUSG00000025188	protein_coding	Hps1	ENSMUST00000159974	retained_intron		19	-1	42779959	4189
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000183869	protein_coding	alternative1	2	-1	11501700	1478
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000126257	nonsense_mediated_decay		5	-1	34637125	939
ENSMUSG00000024561	protein_coding	Mbd1	ENSMUST00000224332	protein_coding		18	1	74273518	3920
ENSMUSG00000037535	lincRNA	1700021A07Rik	ENSMUST00000188024	lincRNA		10	1	21419358	404
ENSMUSG00000025188	protein_coding	Hps1	ENSMUST00000162061	protein_coding	alternative2	19	-1	42778263	2608
ENSMUSG00000047040	protein_coding	Prr15l	ENSMUST00000107636	protein_coding	principal1	11	1	96929324	3545
ENSMUSG00000037535	lincRNA	1700021A07Rik	ENSMUST00000187763	lincRNA		10	1	21419477	485
ENSMUSG00000037535	lincRNA	1700021A07Rik	ENSMUST00000042671	lincRNA		10	1	21425342	309
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000151247	processed_transcript		5	-1	34636522	410
ENSMUSG00000112370	processed_pseudogene	Gm48385	ENSMUST00000217697	processed_pseudogene		10	-1	21436235	403
ENSMUSG00000024561	protein_coding	Mbd1	ENSMUST00000237568	retained_intron		18	1	74276634	796
ENSMUSG00000045282	protein_coding	Tmem86b	ENSMUST00000205402	protein_coding		7	-1	4631422	895
ENSMUSG00000112738	processed_pseudogene	Gm48386	ENSMUST00000219604	processed_pseudogene		10	-1	21445636	456
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000138212	processed_transcript		5	-1	34636535	385
ENSMUSG00000101449	processed_pseudogene	Gm17791	ENSMUST00000185660	processed_pseudogene		7	-1	41327315	1501
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000170196	protein_coding		2	-1	11502101	2163
ENSMUSG00000045282	protein_coding	Tmem86b	ENSMUST00000206610	protein_coding		7	-1	4630336	522
ENSMUSG00000082080	processed_pseudogene	Gm9246	ENSMUST00000117587	processed_pseudogene		7	1	41335384	3490
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000137744	retained_intron		5	-1	34637060	802
ENSMUSG00000027397	protein_coding	Slc20a1	ENSMUST00000140907	retained_intron		2	1	129198801	1628
ENSMUSG00000047040	protein_coding	Prr15l	ENSMUST00000107633	protein_coding	principal1	11	1	96931387	930
ENSMUSG00000025188	protein_coding	Hps1	ENSMUST00000161252	nonsense_mediated_decay		19	-1	42757829	462
ENSMUSG00000108320	antisense	Gm44877	ENSMUST00000206485	antisense		7	1	4626978	274
ENSMUSG00000001082	protein_coding	Mfsd10	ENSMUST00000124668	protein_coding		5	-1	34637140	446
ENSMUSG00000025188	protein_coding	Hps1	ENSMUST00000161761	retained_intron		19	-1	42769810	389
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000191668	protein_coding		2	-1	11502101	2216
ENSMUSG00000114673	antisense	1700016H03Rik	ENSMUST00000223748	antisense		19	-1	45363649	437
ENSMUSG00000047040	protein_coding	Prr15l	ENSMUST00000062172	protein_coding	principal1	11	1	96929394	1242
ENSMUSG00000020462	protein_coding	Cfap36	ENSMUST00000020754	protein_coding	principal1	11	-1	29247409	1664
ENSMUSG00000027397	protein_coding	Slc20a1	ENSMUST00000144744	retained_intron		2	1	129198803	1918
ENSMUSG00000025188	protein_coding	Hps1	ENSMUST00000160621	retained_intron		19	-1	42763876	692
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000049849	protein_coding	alternative1	2	-1	11502101	2076
ENSMUSG00000002250	protein_coding	Ppard	ENSMUST00000002320	protein_coding	principal2	17	1	28232700	3277
ENSMUSG00000102977	lincRNA	Gm37346	ENSMUST00000191665	lincRNA		Y	-1	26106778	1498
ENSMUSG00000033998	protein_coding	Kcnk1	ENSMUST00000046765	protein_coding	principal1	8	1	125995170	2235
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000114844	protein_coding		2	-1	11502101	2107
ENSMUSG00000027397	protein_coding	Slc20a1	ENSMUST00000141285	processed_transcript		2	1	129198803	1989
ENSMUSG00000025188	protein_coding	Hps1	ENSMUST00000026194	protein_coding	principal3	19	-1	42778647	2647
ENSMUSG00000002250	protein_coding	Ppard	ENSMUST00000232879	protein_coding		17	1	28232747	1597
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000100411	protein_coding	alternative1	2	-1	11502101	2008
ENSMUSG00000027397	protein_coding	Slc20a1	ENSMUST00000148988	protein_coding		2	1	129199144	347
ENSMUSG00000024913	protein_coding	Lrp5	ENSMUST00000177330	nonsense_mediated_decay		19	-1	3686561	8893
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000087897	protein_coding		5	1	32863721	8216
ENSMUSG00000090235	processed_transcript	Gm16244	ENSMUST00000159313	processed_transcript		19	1	42779032	2327
ENSMUSG00000027397	protein_coding	Slc20a1	ENSMUST00000110315	protein_coding	principal1	2	1	129199310	3219
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000192844	retained_intron		2	-1	11502075	2188
ENSMUSG00000110181	TEC	Gm45508	ENSMUST00000209298	TEC		7	-1	16404262	299
ENSMUSG00000033998	protein_coding	Kcnk1	ENSMUST00000212831	protein_coding		8	1	125995436	1309
ENSMUSG00000020462	protein_coding	Cfap36	ENSMUST00000141862	retained_intron		11	-1	29247288	884
ENSMUSG00000102977	lincRNA	Gm37346	ENSMUST00000192092	lincRNA		Y	-1	26106325	621
ENSMUSG00000102977	lincRNA	Gm37346	ENSMUST00000194724	lincRNA		Y	-1	26106325	437
ENSMUSG00000024913	protein_coding	Lrp5	ENSMUST00000177294	nonsense_mediated_decay		19	-1	3615792	2835
ENSMUSG00000020462	protein_coding	Cfap36	ENSMUST00000134599	protein_coding		11	-1	29246922	738
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000159545	nonsense_mediated_decay		4	-1	109202234	2754
ENSMUSG00000109781	lincRNA	Gm45509	ENSMUST00000209624	lincRNA		7	-1	16407983	1229
ENSMUSG00000090235	processed_transcript	Gm16244	ENSMUST00000160001	processed_transcript		19	1	42779110	973
ENSMUSG00000030131	protein_coding	Mug2	ENSMUST00000081777	protein_coding	principal1	6	1	122006761	4579
ENSMUSG00000110698	antisense	Gm45875	ENSMUST00000212178	antisense		8	-1	126046808	781
ENSMUSG00000002250	protein_coding	Ppard	ENSMUST00000123020	retained_intron		17	1	28232764	1433
ENSMUSG00000102547	lincRNA	Gm38136	ENSMUST00000194775	lincRNA		Y	1	26138802	2167
ENSMUSG00000020462	protein_coding	Cfap36	ENSMUST00000144627	retained_intron		11	-1	29247068	456
ENSMUSG00000024913	protein_coding	Lrp5	ENSMUST00000176867	protein_coding		19	-1	3686564	2759
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000191726	retained_intron		2	-1	11482111	447
ENSMUSG00000027397	protein_coding	Slc20a1	ENSMUST00000125714	retained_intron		2	1	129206320	712
ENSMUSG00000059273	protein_coding	Zc3h4	ENSMUST00000214735	processed_transcript		7	1	16400910	333
ENSMUSG00000002250	protein_coding	Ppard	ENSMUST00000233761	retained_intron		17	1	28232774	739
ENSMUSG00000035125	protein_coding	Gcfc2	ENSMUST00000043195	protein_coding	principal1	6	1	81923669	4192
ENSMUSG00000020462	protein_coding	Cfap36	ENSMUST00000127940	retained_intron		11	-1	29247192	596
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000192827	processed_transcript		2	-1	11502017	775
ENSMUSG00000103675	unprocessed_pseudogene	Gm37991	ENSMUST00000194297	unprocessed_pseudogene		Y	1	26180163	696
ENSMUSG00000027397	protein_coding	Slc20a1	ENSMUST00000144025	retained_intron		2	1	129207360	552
ENSMUSG00000108208	processed_pseudogene	Gm44184	ENSMUST00000204290	processed_pseudogene		6	-1	122034635	132
ENSMUSG00000018548	protein_coding	Trim37	ENSMUST00000041282	protein_coding	principal1	11	1	87127077	5632
ENSMUSG00000002250	protein_coding	Ppard	ENSMUST00000166744	protein_coding	alternative2	17	1	28232782	1375
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000155167	retained_intron		2	-1	11501797	646
ENSMUSG00000103009	TEC	Gm4430	ENSMUST00000192413	TEC		2	-1	129199194	1943
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000030288	protein_coding	alternative1	4	-1	109202272	2871
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000140580	processed_transcript		2	-1	11498351	666
ENSMUSG00000018548	protein_coding	Trim37	ENSMUST00000139532	protein_coding		11	1	87127305	766
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000144921	retained_intron		2	-1	11501296	614
ENSMUSG00000002250	protein_coding	Ppard	ENSMUST00000142226	retained_intron		17	1	28232807	1739
ENSMUSG00000005949	protein_coding	Ctns	ENSMUST00000006103	protein_coding	principal1	11	-1	73199042	2570
ENSMUSG00000094905	protein_coding	Vmn1r155	ENSMUST00000177632	protein_coding	principal1	7	1	22658018	924
ENSMUSG00000087528	processed_transcript	9830144P21Rik	ENSMUST00000127525	processed_transcript		2	-1	129226438	3362
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000159198	processed_transcript		4	-1	109087449	598
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000145970	processed_transcript		2	-1	11500863	369
ENSMUSG00000087528	processed_transcript	9830144P21Rik	ENSMUST00000126080	processed_transcript		2	-1	129230579	2070
ENSMUSG00000041000	protein_coding	Trim62	ENSMUST00000147852	nonsense_mediated_decay		4	1	128883580	2722
ENSMUSG00000018548	protein_coding	Trim37	ENSMUST00000152637	retained_intron		11	1	87186513	2488
ENSMUSG00000018548	protein_coding	Trim37	ENSMUST00000154138	protein_coding		11	1	87190074	1017
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000162787	protein_coding	principal3	4	-1	109202272	2408
ENSMUSG00000002250	protein_coding	Ppard	ENSMUST00000144200	processed_transcript		17	1	28271708	417
ENSMUSG00000002250	protein_coding	Ppard	ENSMUST00000169040	protein_coding		17	1	28272119	963
ENSMUSG00000116733	bidirectional_promoter_lncRNA	6330408M09Rik	ENSMUST00000231407	bidirectional_promoter_lncRNA		16	1	23127793	1130
ENSMUSG00000025839	protein_coding	Pramel7	ENSMUST00000026957	protein_coding	principal1	2	-1	87492418	1861
ENSMUSG00000002250	protein_coding	Ppard	ENSMUST00000233383	retained_intron		17	1	28293246	3726
ENSMUSG00000116540	processed_pseudogene	Gm49624	ENSMUST00000232214	processed_pseudogene		16	-1	23134320	415
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000161363	protein_coding		4	-1	109156610	2356
ENSMUSG00000055653	protein_coding	Gpc3	ENSMUST00000069360	protein_coding	principal1	X	-1	52613921	2216
ENSMUSG00000062198	protein_coding	2700097O09Rik	ENSMUST00000021406	protein_coding	principal1	12	-1	55080110	1105
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000155434	processed_transcript		4	-1	109065990	471
ENSMUSG00000005949	protein_coding	Ctns	ENSMUST00000108476	protein_coding	principal1	11	-1	73199042	2723
ENSMUSG00000035125	protein_coding	Gcfc2	ENSMUST00000152996	nonsense_mediated_decay		6	1	81923673	3519
ENSMUSG00000025839	protein_coding	Pramel7	ENSMUST00000148030	processed_transcript		2	-1	87497093	675
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000139412	processed_transcript		4	-1	109072084	668
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000119705	protein_coding	principal2	5	1	32863734	7929
ENSMUSG00000055653	protein_coding	Gpc3	ENSMUST00000114857	protein_coding		X	-1	52613950	1880
ENSMUSG00000025839	protein_coding	Pramel7	ENSMUST00000138293	processed_transcript		2	-1	87496890	625
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000126288	processed_transcript		4	-1	109117698	790
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000114845	protein_coding		2	-1	11502090	1971
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000115094	protein_coding	principal1	X	1	42067836	6542
ENSMUSG00000109338	lincRNA	Gm45030	ENSMUST00000207575	lincRNA		16	-1	76502909	1776
ENSMUSG00000005949	protein_coding	Ctns	ENSMUST00000130101	retained_intron		11	-1	73188806	705
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000152167	processed_transcript		4	-1	109109765	697
ENSMUSG00000062198	protein_coding	2700097O09Rik	ENSMUST00000136281	retained_intron		12	-1	55054101	1160
ENSMUSG00000026773	protein_coding	Pfkfb3	ENSMUST00000171188	protein_coding		2	-1	11502090	2058
ENSMUSG00000035125	protein_coding	Gcfc2	ENSMUST00000132301	retained_intron		6	1	81923680	2429
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000161602	retained_intron		4	-1	109156796	745
ENSMUSG00000035125	protein_coding	Gcfc2	ENSMUST00000204691	retained_intron		6	1	81930715	453
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000126375	protein_coding		X	1	42067881	487
ENSMUSG00000102376	TEC	Gm37975	ENSMUST00000195494	TEC		2	-1	11534694	2099
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000160895	retained_intron		4	-1	109088779	1415
ENSMUSG00000035125	protein_coding	Gcfc2	ENSMUST00000147673	retained_intron		6	1	81932869	612
ENSMUSG00000025839	protein_coding	Pramel7	ENSMUST00000141790	processed_transcript		2	-1	87496899	649
ENSMUSG00000014542	protein_coding	Clec4f	ENSMUST00000014686	protein_coding	principal1	6	-1	83656187	2471
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000153714	processed_transcript		4	-1	109108031	491
ENSMUSG00000035125	protein_coding	Gcfc2	ENSMUST00000127949	retained_intron		6	1	81941354	1953
ENSMUSG00000005949	protein_coding	Ctns	ENSMUST00000144658	retained_intron		11	-1	73199021	715
ENSMUSG00000062198	protein_coding	2700097O09Rik	ENSMUST00000222572	processed_transcript		12	-1	55080104	798
ENSMUSG00000035125	protein_coding	Gcfc2	ENSMUST00000203959	protein_coding		6	1	81946503	630
ENSMUSG00000005949	protein_coding	Ctns	ENSMUST00000150468	processed_transcript		11	-1	73198995	600
ENSMUSG00000041638	protein_coding	Gcn1	ENSMUST00000064454	protein_coding	principal1	5	1	115565254	8555
ENSMUSG00000035125	protein_coding	Gcfc2	ENSMUST00000129678	retained_intron		6	1	81949682	641
ENSMUSG00000062198	protein_coding	2700097O09Rik	ENSMUST00000156852	retained_intron		12	-1	55080108	4110
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000150635	processed_transcript		X	1	42067918	591
ENSMUSG00000113467	processed_pseudogene	Gm46350	ENSMUST00000222661	processed_pseudogene		12	-1	55066917	415
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000115095	protein_coding	principal1	X	1	42068398	6670
ENSMUSG00000113137	processed_pseudogene	Gm7511	ENSMUST00000220953	processed_pseudogene		12	-1	55068201	450
ENSMUSG00000055110	antisense	A630012P03Rik	ENSMUST00000114854	antisense		X	1	52575843	1974
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000139248	processed_transcript		4	-1	109157125	747
ENSMUSG00000014542	protein_coding	Clec4f	ENSMUST00000137647	processed_transcript		6	-1	83656121	608
ENSMUSG00000029771	protein_coding	Irf5	ENSMUST00000004392	protein_coding	principal3	6	1	29526625	2189
ENSMUSG00000055110	antisense	A630012P03Rik	ENSMUST00000068507	antisense		X	1	52575843	1972
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000146874	processed_transcript		X	1	42068410	500
ENSMUSG00000034108	protein_coding	Ccs	ENSMUST00000235216	retained_intron		19	-1	4826009	539
ENSMUSG00000107660	lincRNA	Gm6559	ENSMUST00000204678	lincRNA		6	1	51379710	1694
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000147457	processed_transcript		4	-1	109202236	548
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000145065	processed_transcript		X	1	42068755	5407
ENSMUSG00000111463	lincRNA	Gm48061	ENSMUST00000213965	lincRNA		10	-1	44590238	370
ENSMUSG00000041000	protein_coding	Trim62	ENSMUST00000035667	protein_coding	principal1	4	1	128883588	3752
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000055483	protein_coding	principal1	X	1	42071325	6374
ENSMUSG00000028559	protein_coding	Osbpl9	ENSMUST00000159758	retained_intron		4	-1	109202234	653
ENSMUSG00000111730	processed_pseudogene	Gm5950	ENSMUST00000213337	processed_pseudogene		10	1	44589928	772
ENSMUSG00000029771	protein_coding	Irf5	ENSMUST00000167252	protein_coding	alternative2	6	1	29526708	1693
ENSMUSG00000025860	protein_coding	Xiap	ENSMUST00000026978	protein_coding	principal1	X	1	42093728	6834
ENSMUSG00000099450	processed_pseudogene	Gm6799	ENSMUST00000186919	processed_pseudogene		1	1	53363114	573
ENSMUSG00000050002	protein_coding	Idnk	ENSMUST00000226010	protein_coding		13	1	58157649	1898
ENSMUSG00000108236	lincRNA	0610033M10Rik	ENSMUST00000205236	lincRNA		6	-1	51402219	1102
ENSMUSG00000033781	protein_coding	Asb13	ENSMUST00000042288	protein_coding	principal1	13	1	3634032	4453
ENSMUSG00000029771	protein_coding	Irf5	ENSMUST00000164626	protein_coding		6	1	29528270	350
ENSMUSG00000031647	protein_coding	Mfap3l	ENSMUST00000161421	protein_coding		8	1	60632827	4142
ENSMUSG00000100069	unprocessed_pseudogene	Gm6801	ENSMUST00000190697	unprocessed_pseudogene		1	1	53390415	339
ENSMUSG00000015095	protein_coding	Fbxw5	ENSMUST00000015239	protein_coding	principal1	2	1	25500750	2388
ENSMUSG00000108236	lincRNA	0610033M10Rik	ENSMUST00000204546	lincRNA		6	-1	51402033	506
ENSMUSG00000020657	protein_coding	Dnajc27	ENSMUST00000020986	protein_coding	principal1	12	1	4082583	4698
ENSMUSG00000033781	protein_coding	Asb13	ENSMUST00000156595	processed_transcript		13	1	3634089	456
ENSMUSG00000029771	protein_coding	Irf5	ENSMUST00000163511	protein_coding	principal3	6	1	29529282	2241
ENSMUSG00000033781	protein_coding	Asb13	ENSMUST00000141147	processed_transcript		13	1	3634098	576
ENSMUSG00000029771	protein_coding	Irf5	ENSMUST00000164922	protein_coding		6	1	29531248	402
ENSMUSG00000033781	protein_coding	Asb13	ENSMUST00000141967	retained_intron		13	1	3634099	838
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000121802	protein_coding	alternative2	8	1	22974882	8218
ENSMUSG00000025156	protein_coding	Gps1	ENSMUST00000132422	retained_intron		11	1	120784272	798
ENSMUSG00000113759	lincRNA	Gm47695	ENSMUST00000223157	lincRNA		13	1	3759825	773
ENSMUSG00000029771	protein_coding	Irf5	ENSMUST00000171527	processed_transcript		6	1	29541146	403
ENSMUSG00000103730	TEC	Gm38316	ENSMUST00000194838	TEC		14	-1	50952004	469
ENSMUSG00000106904	TEC	Gm43029	ENSMUST00000201829	TEC		6	-1	29548138	1535
ENSMUSG00000020657	protein_coding	Dnajc27	ENSMUST00000219923	nonsense_mediated_decay		12	1	4082629	2934
ENSMUSG00000113259	lincRNA	Gm35190	ENSMUST00000223062	lincRNA		13	-1	3766169	635
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000117270	protein_coding	alternative2	8	1	22975136	5652
ENSMUSG00000020884	protein_coding	Asgr1	ENSMUST00000146411	protein_coding	principal3	11	1	70054085	1188
ENSMUSG00000101884	unprocessed_pseudogene	Gm28658	ENSMUST00000191532	unprocessed_pseudogene		Y	-1	83391446	615
ENSMUSG00000113259	lincRNA	Gm35190	ENSMUST00000222335	lincRNA		13	-1	3766722	526
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000117662	protein_coding	alternative2	8	1	23035099	6257
ENSMUSG00000020657	protein_coding	Dnajc27	ENSMUST00000220273	processed_transcript		12	1	4088582	620
ENSMUSG00000020657	protein_coding	Dnajc27	ENSMUST00000049584	protein_coding	principal1	12	1	4082629	2934
ENSMUSG00000102681	TEC	Gm37221	ENSMUST00000194472	TEC		1	-1	123374178	3007
ENSMUSG00000104410	TEC	Gm37066	ENSMUST00000192713	TEC		1	-1	123393171	2061
ENSMUSG00000104205	TEC	Gm37396	ENSMUST00000191827	TEC		1	-1	123469944	1495
ENSMUSG00000030045	protein_coding	Mrpl19	ENSMUST00000032124	protein_coding	principal1	6	-1	81965958	5000
ENSMUSG00000103842	lincRNA	Gm37808	ENSMUST00000192038	lincRNA		Y	1	26208875	442
ENSMUSG00000102940	TEC	Gm37551	ENSMUST00000195556	TEC		1	-1	123830159	2861
ENSMUSG00000040158	protein_coding	Tax1bp3	ENSMUST00000040687	protein_coding	principal1	11	1	73177083	1523
ENSMUSG00000015095	protein_coding	Fbxw5	ENSMUST00000124258	processed_transcript		2	1	25500816	787
ENSMUSG00000030045	protein_coding	Mrpl19	ENSMUST00000128374	retained_intron		6	-1	81962858	732
ENSMUSG00000041638	protein_coding	Gcn1	ENSMUST00000141472	retained_intron		5	1	115565272	2224
ENSMUSG00000030045	protein_coding	Mrpl19	ENSMUST00000148025	processed_transcript		6	-1	81965641	419
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000117296	protein_coding	alternative2	8	1	23035128	6794
ENSMUSG00000059273	protein_coding	Zc3h4	ENSMUST00000098789	protein_coding	principal2	7	1	16401207	6039
ENSMUSG00000038770	protein_coding	Kpna7	ENSMUST00000110673	protein_coding	alternative2	5	-1	145010643	2453
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000141784	protein_coding	alternative2	8	1	23035231	6566
ENSMUSG00000050002	protein_coding	Idnk	ENSMUST00000051490	protein_coding	principal1	13	1	58157649	764
ENSMUSG00000041638	protein_coding	Gcn1	ENSMUST00000136041	retained_intron		5	1	115565274	5085
ENSMUSG00000106664	processed_pseudogene	Gm17936	ENSMUST00000199413	processed_pseudogene		5	1	8912971	988
ENSMUSG00000038770	protein_coding	Kpna7	ENSMUST00000110672	protein_coding	principal3	5	-1	145009633	2262
ENSMUSG00000020884	protein_coding	Asgr1	ENSMUST00000108585	protein_coding	alternative2	11	1	70054355	1169
ENSMUSG00000040158	protein_coding	Tax1bp3	ENSMUST00000133922	processed_transcript		11	1	73177251	389
ENSMUSG00000041638	protein_coding	Gcn1	ENSMUST00000129424	retained_intron		5	1	115565276	3689
ENSMUSG00000020884	protein_coding	Asgr1	ENSMUST00000018699	protein_coding	principal3	11	1	70054355	1259
ENSMUSG00000041638	protein_coding	Gcn1	ENSMUST00000202584	retained_intron		5	1	115565303	1918
ENSMUSG00000040158	protein_coding	Tax1bp3	ENSMUST00000150407	retained_intron		11	1	73177251	2644
ENSMUSG00000025156	protein_coding	Gps1	ENSMUST00000153678	nonsense_mediated_decay		11	1	120784275	1617
ENSMUSG00000078759	protein_coding	Scgb1b7	ENSMUST00000108097	protein_coding	principal1	7	1	31712665	419
ENSMUSG00000059273	protein_coding	Zc3h4	ENSMUST00000209289	protein_coding	alternative2	7	1	16401207	5853
ENSMUSG00000038770	protein_coding	Kpna7	ENSMUST00000142866	processed_transcript		5	-1	145004679	538
ENSMUSG00000015095	protein_coding	Fbxw5	ENSMUST00000126601	processed_transcript		2	1	25500818	986
ENSMUSG00000038770	protein_coding	Kpna7	ENSMUST00000139024	protein_coding		5	-1	145009390	598
ENSMUSG00000059273	protein_coding	Zc3h4	ENSMUST00000209374	retained_intron		7	1	16414845	3244
ENSMUSG00000015095	protein_coding	Fbxw5	ENSMUST00000142004	processed_transcript		2	1	25500859	653
ENSMUSG00000020884	protein_coding	Asgr1	ENSMUST00000092959	protein_coding	principal3	11	1	70054698	1308
ENSMUSG00000040158	protein_coding	Tax1bp3	ENSMUST00000108477	protein_coding		11	1	73177270	1153
ENSMUSG00000015095	protein_coding	Fbxw5	ENSMUST00000135511	processed_transcript		2	1	25500879	567
ENSMUSG00000050002	protein_coding	Idnk	ENSMUST00000109868	protein_coding		13	1	58157654	1462
ENSMUSG00000109647	antisense	Gm45510	ENSMUST00000210059	antisense		7	-1	16416621	638
ENSMUSG00000116317	processed_pseudogene	Gm49536	ENSMUST00000230174	processed_pseudogene		16	1	15000322	168
ENSMUSG00000083296	processed_pseudogene	Gm12638	ENSMUST00000119531	processed_pseudogene		4	-1	92373348	298
ENSMUSG00000038770	protein_coding	Kpna7	ENSMUST00000151196	protein_coding		5	-1	145084030	676
ENSMUSG00000015095	protein_coding	Fbxw5	ENSMUST00000129104	processed_transcript		2	1	25502558	785
ENSMUSG00000015095	protein_coding	Fbxw5	ENSMUST00000135456	processed_transcript		2	1	25503038	600
ENSMUSG00000020884	protein_coding	Asgr1	ENSMUST00000123369	protein_coding		11	1	70055881	600
ENSMUSG00000085209	lincRNA	Gm12637	ENSMUST00000130501	lincRNA		4	1	92528551	368
ENSMUSG00000038770	protein_coding	Kpna7	ENSMUST00000116454	protein_coding	principal3	5	-1	145008028	1500
ENSMUSG00000050002	protein_coding	Idnk	ENSMUST00000225236	nonsense_mediated_decay		13	1	58157683	689
ENSMUSG00000015095	protein_coding	Fbxw5	ENSMUST00000148845	processed_transcript		2	1	25503907	870
ENSMUSG00000106393	lincRNA	Gm43562	ENSMUST00000196439	lincRNA		5	1	145032836	238
ENSMUSG00000118480	unitary_pseudogene	Gm50458	ENSMUST00000238523	unitary_pseudogene		5	1	145067517	162
ENSMUSG00000115338	protein_coding	Pnp	ENSMUST00000226871	protein_coding		14	1	50931082	671
ENSMUSG00000105024	processed_pseudogene	Gm43561	ENSMUST00000199866	processed_pseudogene		5	-1	145035821	448
ENSMUSG00000015095	protein_coding	Fbxw5	ENSMUST00000124375	protein_coding		2	1	25503226	739
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000139098	retained_intron		5	1	32863760	3872
ENSMUSG00000110472	processed_pseudogene	Gm45739	ENSMUST00000213094	processed_pseudogene		8	1	68299069	388
ENSMUSG00000018678	protein_coding	Sp2	ENSMUST00000107624	protein_coding	principal1	11	-1	96977711	3055
ENSMUSG00000110650	processed_pseudogene	Gm19170	ENSMUST00000212440	processed_pseudogene		8	-1	68318080	1084
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000139463	retained_intron		5	1	32863770	1219
ENSMUSG00000018678	protein_coding	Sp2	ENSMUST00000107623	protein_coding		11	-1	96968665	2907
ENSMUSG00000031647	protein_coding	Mfap3l	ENSMUST00000160719	protein_coding	principal1	8	1	60632860	6335
ENSMUSG00000018678	protein_coding	Sp2	ENSMUST00000062652	protein_coding		11	-1	96982959	2367
ENSMUSG00000085307	antisense	Gm11525	ENSMUST00000134436	antisense		11	-1	96922493	2804
ENSMUSG00000061707	protein_coding	Gm4871	ENSMUST00000071421	protein_coding	principal1	5	-1	145032754	1119
ENSMUSG00000031647	protein_coding	Mfap3l	ENSMUST00000161702	protein_coding	principal1	8	1	60655104	2215
ENSMUSG00000018659	protein_coding	Pnpo	ENSMUST00000153896	processed_transcript		11	-1	96943779	2573
ENSMUSG00000020153	protein_coding	Ndufs7	ENSMUST00000105364	protein_coding	principal1	10	1	80249121	983
ENSMUSG00000055235	protein_coding	Wdr86	ENSMUST00000068693	protein_coding	principal1	5	-1	24730727	2364
ENSMUSG00000041638	protein_coding	Gcn1	ENSMUST00000125299	processed_transcript		5	1	115582397	465
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000073572	protein_coding	alternative2	3	-1	89214430	1617
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000123418	nonsense_mediated_decay		8	1	23058259	8366
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000195980	nonsense_mediated_decay		5	1	32863770	1732
ENSMUSG00000031647	protein_coding	Mfap3l	ENSMUST00000034066	protein_coding	principal1	8	1	60655540	1896
ENSMUSG00000020153	protein_coding	Ndufs7	ENSMUST00000152939	retained_intron		10	1	80249449	420
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000125574	protein_coding		5	1	32863772	683
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000173475	protein_coding		3	-1	89210336	609
ENSMUSG00000020153	protein_coding	Ndufs7	ENSMUST00000155523	retained_intron		10	1	80249460	435
ENSMUSG00000055235	protein_coding	Wdr86	ENSMUST00000142607	retained_intron		5	-1	24730680	4362
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000174218	retained_intron		3	-1	89209664	495
ENSMUSG00000055235	protein_coding	Wdr86	ENSMUST00000196443	retained_intron		5	-1	24713377	1109
ENSMUSG00000020153	protein_coding	Ndufs7	ENSMUST00000157063	processed_transcript		10	1	80249485	722
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000138249	processed_transcript		3	-1	89210094	553
ENSMUSG00000055235	protein_coding	Wdr86	ENSMUST00000127320	protein_coding		5	-1	24715581	364
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000084038	protein_coding	principal3	8	1	23058275	8147
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000118964	protein_coding		3	-1	89214357	1445
ENSMUSG00000020153	protein_coding	Ndufs7	ENSMUST00000155336	retained_intron		10	1	80253315	770
ENSMUSG00000041638	protein_coding	Gcn1	ENSMUST00000094427	processed_transcript		5	1	115605696	3857
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000129055	nonsense_mediated_decay		3	-1	89210121	423
ENSMUSG00000041638	protein_coding	Gcn1	ENSMUST00000122964	retained_intron		5	1	115609838	643
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000021089	protein_coding	principal1	11	-1	115628145	2307
ENSMUSG00000041638	protein_coding	Gcn1	ENSMUST00000139933	processed_transcript		5	1	115611831	240
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000118733	protein_coding	alternative2	8	1	23058311	8201
ENSMUSG00000020153	protein_coding	Ndufs7	ENSMUST00000020361	protein_coding	principal1	10	1	80249452	758
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000201802	processed_transcript		5	1	32863777	3511
ENSMUSG00000041638	protein_coding	Gcn1	ENSMUST00000137523	retained_intron		5	1	115614872	754
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000202927	protein_coding		5	1	32864155	327
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000106503	protein_coding		11	-1	115628093	1055
ENSMUSG00000113361	lincRNA	B930059L03Rik	ENSMUST00000221143	lincRNA		12	1	110590512	2189
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000119222	protein_coding		3	-1	89213907	1197
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000173248	protein_coding	alternative2	8	1	23058525	7100
ENSMUSG00000025019	protein_coding	Lcor	ENSMUST00000067795	protein_coding	principal1	19	1	41482637	4833
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000120902	protein_coding	alternative1	5	1	32864587	5195
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000135552	protein_coding		11	-1	115622825	826
ENSMUSG00000053886	protein_coding	Sh2d4a	ENSMUST00000066594	protein_coding	principal1	8	1	68276567	2718
ENSMUSG00000113702	lincRNA	Gm35558	ENSMUST00000221819	lincRNA		12	-1	110597106	499
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000173477	protein_coding		3	-1	89213840	892
ENSMUSG00000028293	protein_coding	Slc35a1	ENSMUST00000029970	protein_coding	principal1	4	-1	34687438	2039
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000201836	nonsense_mediated_decay		5	1	32904287	428
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000129194	processed_transcript		11	-1	115617905	491
ENSMUSG00000053886	protein_coding	Sh2d4a	ENSMUST00000212166	protein_coding		8	1	68282307	1600
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000173573	nonsense_mediated_decay		8	1	23058525	5781
ENSMUSG00000025019	protein_coding	Lcor	ENSMUST00000237208	protein_coding		19	1	41483029	1863
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000173593	nonsense_mediated_decay		3	-1	89213912	775
ENSMUSG00000115338	protein_coding	Pnp	ENSMUST00000048615	protein_coding	principal1	14	1	50944302	2942
ENSMUSG00000025019	protein_coding	Lcor	ENSMUST00000238398	protein_coding		19	1	41483029	5764
ENSMUSG00000113781	lincRNA	Gm35558	ENSMUST00000222264	lincRNA		12	-1	110597359	204
ENSMUSG00000039814	protein_coding	Xkr5	ENSMUST00000095438	protein_coding	principal1	8	-1	18950975	2838
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000152511	protein_coding		8	1	23096101	3514
ENSMUSG00000028293	protein_coding	Slc35a1	ENSMUST00000151549	processed_transcript		4	-1	34683462	1141
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000124780	nonsense_mediated_decay		5	1	32924206	3176
ENSMUSG00000036764	protein_coding	Dnajc12	ENSMUST00000129625	protein_coding		10	1	63382443	592
ENSMUSG00000025019	protein_coding	Lcor	ENSMUST00000237976	retained_intron		19	1	41549639	4663
ENSMUSG00000115338	protein_coding	Pnp	ENSMUST00000228712	retained_intron		14	1	50944523	928
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000135206	retained_intron		8	1	23120949	4304
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000038608	protein_coding	principal1	7	-1	3693523	2878
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000137169	protein_coding		5	1	32924304	3359
ENSMUSG00000024260	protein_coding	Sap130	ENSMUST00000234760	retained_intron		18	1	31634371	749
ENSMUSG00000028293	protein_coding	Slc35a1	ENSMUST00000126033	protein_coding		4	-1	34683369	751
ENSMUSG00000018659	protein_coding	Pnpo	ENSMUST00000018803	protein_coding	principal1	11	-1	96943986	1994
ENSMUSG00000025019	protein_coding	Lcor	ENSMUST00000238431	protein_coding		19	1	41575867	4852
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000238200	nonsense_mediated_decay		5	1	32933950	175
ENSMUSG00000115338	protein_coding	Pnp	ENSMUST00000228631	processed_transcript		14	1	50944561	368
ENSMUSG00000028293	protein_coding	Slc35a1	ENSMUST00000124456	processed_transcript		4	-1	34687255	554
ENSMUSG00000056383	protein_coding	AI987944	ENSMUST00000071804	protein_coding	principal3	7	-1	41393260	2671
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000141812	retained_intron		5	1	32943818	431
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000121075	protein_coding		8	1	23139030	1740
ENSMUSG00000028293	protein_coding	Slc35a1	ENSMUST00000154020	processed_transcript		4	-1	34687396	358
ENSMUSG00000025019	protein_coding	Lcor	ENSMUST00000163929	protein_coding	principal1	19	1	41549639	4663
ENSMUSG00000056383	protein_coding	AI987944	ENSMUST00000206801	protein_coding		7	-1	41393312	1701
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000144083	processed_transcript		11	-1	115628107	755
ENSMUSG00000018659	protein_coding	Pnpo	ENSMUST00000107629	protein_coding		11	-1	96943958	681
ENSMUSG00000115338	protein_coding	Pnp	ENSMUST00000178092	protein_coding	principal1	14	1	50944506	1306
ENSMUSG00000056383	protein_coding	AI987944	ENSMUST00000205338	protein_coding	alternative2	7	-1	41393379	2071
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000130461	protein_coding		5	1	32944113	620
ENSMUSG00000025019	protein_coding	Lcor	ENSMUST00000172371	protein_coding		19	1	41582370	3729
ENSMUSG00000100906	unprocessed_pseudogene	Gm29238	ENSMUST00000189709	unprocessed_pseudogene		Y	-1	83428403	695
ENSMUSG00000014852	protein_coding	Adamts13	ENSMUST00000014996	protein_coding		2	1	26973416	3474
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000150898	processed_transcript		11	-1	115628106	954
ENSMUSG00000100092	unprocessed_pseudogene	Gm21088	ENSMUST00000190875	unprocessed_pseudogene		Y	1	83537567	316
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000033947	protein_coding		8	1	23139105	1030
ENSMUSG00000056383	protein_coding	AI987944	ENSMUST00000206430	retained_intron		7	-1	41393294	1139
ENSMUSG00000101371	processed_pseudogene	Gm9114	ENSMUST00000188558	processed_pseudogene		7	1	31744189	997
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000127560	retained_intron		5	1	32967719	583
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000140539	processed_transcript		11	-1	115628112	834
ENSMUSG00000034108	protein_coding	Ccs	ENSMUST00000236451	protein_coding		19	-1	4839270	984
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000174435	protein_coding		8	1	23139277	328
ENSMUSG00000102038	processed_pseudogene	Gm12345	ENSMUST00000119288	processed_pseudogene		11	1	77149628	898
ENSMUSG00000081987	processed_pseudogene	Gm12639	ENSMUST00000121400	processed_pseudogene		4	-1	92970736	493
ENSMUSG00000046822	protein_coding	Slc39a3	ENSMUST00000117276	protein_coding	principal1	10	-1	81037426	3796
ENSMUSG00000100284	unprocessed_pseudogene	Gm29239	ENSMUST00000190304	unprocessed_pseudogene		Y	-1	83618135	696
ENSMUSG00000113779	lincRNA	Gm33785	ENSMUST00000222961	lincRNA		12	1	72817712	886
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000174126	protein_coding		3	-1	89227052	686
ENSMUSG00000037426	protein_coding	Depdc5	ENSMUST00000049780	protein_coding		5	1	32863721	3569
ENSMUSG00000031543	protein_coding	Ank1	ENSMUST00000130311	retained_intron		8	1	23140093	416
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000134171	processed_transcript		11	-1	115628281	368
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000141614	protein_coding		11	-1	115628112	455
ENSMUSG00000100517	processed_pseudogene	Gm29627	ENSMUST00000187984	processed_pseudogene		7	1	31766952	463
ENSMUSG00000100986	unprocessed_pseudogene	Gm21741	ENSMUST00000185883	unprocessed_pseudogene		Y	-1	83715782	696
ENSMUSG00000105929	TEC	Gm43693	ENSMUST00000196072	TEC		5	1	32984570	1249
ENSMUSG00000034108	protein_coding	Ccs	ENSMUST00000236178	protein_coding		19	-1	4839273	870
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000154623	protein_coding		11	-1	115627948	461
ENSMUSG00000099961	unprocessed_pseudogene	Scgb2b8-ps	ENSMUST00000188661	unprocessed_pseudogene		7	-1	31780558	327
ENSMUSG00000109410	unprocessed_pseudogene	Olfr1430-ps1	ENSMUST00000207422	unprocessed_pseudogene		19	-1	12178523	917
ENSMUSG00000101718	unprocessed_pseudogene	Gm20862	ENSMUST00000191559	unprocessed_pseudogene		Y	-1	83790566	696
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000155709	protein_coding		11	-1	115628130	453
ENSMUSG00000046822	protein_coding	Slc39a3	ENSMUST00000059551	protein_coding	principal1	10	-1	81037308	3680
ENSMUSG00000086741	antisense	Gm15816	ENSMUST00000141930	antisense		8	-1	23149585	1688
ENSMUSG00000099736	unprocessed_pseudogene	Gm20863	ENSMUST00000188992	unprocessed_pseudogene		Y	-1	83853059	696
ENSMUSG00000082919	processed_pseudogene	Gm12641	ENSMUST00000117874	processed_pseudogene		4	1	93106988	985
ENSMUSG00000083285	processed_pseudogene	Gm15815	ENSMUST00000120569	processed_pseudogene		8	1	23127456	255
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000079949	protein_coding	principal2	11	-1	5099266	2588
ENSMUSG00000099612	unprocessed_pseudogene	Scgb1b8-ps	ENSMUST00000189652	unprocessed_pseudogene		7	1	31788283	249
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000124086	retained_intron		3	-1	89210836	599
ENSMUSG00000046822	protein_coding	Slc39a3	ENSMUST00000154877	processed_transcript		10	-1	81037282	368
ENSMUSG00000039814	protein_coding	Xkr5	ENSMUST00000152974	nonsense_mediated_decay		8	-1	18950916	3116
ENSMUSG00000020744	protein_coding	Slc25a19	ENSMUST00000178003	protein_coding	principal1	11	-1	115628295	2614
ENSMUSG00000101657	unprocessed_pseudogene	Gm20864	ENSMUST00000188075	unprocessed_pseudogene		Y	-1	83927735	696
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000138633	retained_intron		3	-1	89210723	496
ENSMUSG00000082325	processed_pseudogene	Gm12642	ENSMUST00000121098	processed_pseudogene		4	-1	93266288	876
ENSMUSG00000046822	protein_coding	Slc39a3	ENSMUST00000152177	processed_transcript		10	-1	81037250	402
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000127106	nonsense_mediated_decay		7	-1	3692118	1964
ENSMUSG00000100740	unprocessed_pseudogene	Gm29476	ENSMUST00000188397	unprocessed_pseudogene		Y	-1	83957317	615
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000128364	protein_coding		7	-1	3691867	797
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000130118	processed_transcript		11	-1	5070891	649
ENSMUSG00000100718	unprocessed_pseudogene	Gm21717	ENSMUST00000189902	unprocessed_pseudogene		Y	-1	83994347	696
ENSMUSG00000046822	protein_coding	Slc39a3	ENSMUST00000168076	protein_coding	principal1	10	-1	81033912	3461
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000093365	protein_coding		11	-1	5099066	1290
ENSMUSG00000085459	antisense	Gm12272	ENSMUST00000138136	antisense		11	1	61527755	333
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000130060	processed_transcript		11	-1	5072220	898
ENSMUSG00000068417	protein_coding	Pnp2	ENSMUST00000095925	protein_coding	principal1	14	1	50955992	1372
ENSMUSG00000054000	protein_coding	Tusc1	ENSMUST00000066774	protein_coding	principal1	4	-1	93335511	1374
ENSMUSG00000036764	protein_coding	Dnajc12	ENSMUST00000043317	protein_coding	principal1	10	1	63386563	3025
ENSMUSG00000041645	protein_coding	Ddx24	ENSMUST00000044923	protein_coding	principal3	12	-1	103425819	2850
ENSMUSG00000039814	protein_coding	Xkr5	ENSMUST00000144987	processed_transcript		8	-1	18950871	3911
ENSMUSG00000014852	protein_coding	Adamts13	ENSMUST00000102891	protein_coding	principal1	2	1	26973493	4506
ENSMUSG00000039814	protein_coding	Xkr5	ENSMUST00000143913	nonsense_mediated_decay		8	-1	18950937	2567
ENSMUSG00000073565	protein_coding	Prr16	ENSMUST00000116639	protein_coding	principal1	18	1	51117733	2938
ENSMUSG00000034108	protein_coding	Ccs	ENSMUST00000037246	protein_coding	principal1	19	-1	4839332	1067
ENSMUSG00000113170	lincRNA	Gm36839	ENSMUST00000222088	lincRNA		13	-1	34875432	2093
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000133223	retained_intron		7	-1	3684528	795
ENSMUSG00000068417	protein_coding	Pnp2	ENSMUST00000228593	processed_transcript		14	1	50956244	607
ENSMUSG00000084833	lincRNA	Gm12649	ENSMUST00000137509	lincRNA		4	-1	93671070	581
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000156847	retained_intron		3	-1	89213862	915
ENSMUSG00000034108	protein_coding	Ccs	ENSMUST00000235245	protein_coding		19	-1	4839287	840
ENSMUSG00000014852	protein_coding	Adamts13	ENSMUST00000147216	processed_transcript		2	1	27006571	603
ENSMUSG00000029621	protein_coding	Arpc1a	ENSMUST00000031625	protein_coding	principal1	5	1	145083830	1632
ENSMUSG00000073565	protein_coding	Prr16	ENSMUST00000235541	nonsense_mediated_decay		18	1	51117738	2501
ENSMUSG00000083607	processed_pseudogene	Gm12640	ENSMUST00000120097	processed_pseudogene		4	1	93599186	310
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000173465	nonsense_mediated_decay		3	-1	89213885	581
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000131688	retained_intron		7	-1	3692952	3379
ENSMUSG00000036764	protein_coding	Dnajc12	ENSMUST00000136832	retained_intron		10	1	63386571	2643
ENSMUSG00000021871	protein_coding	Gm49342	ENSMUST00000227052	protein_coding	principal1	14	1	50944517	750
ENSMUSG00000039814	protein_coding	Xkr5	ENSMUST00000055503	protein_coding		8	-1	18950973	3176
ENSMUSG00000109992	lincRNA	Gm45650	ENSMUST00000211162	lincRNA		8	1	60719291	2169
ENSMUSG00000099344	processed_pseudogene	Gm6669	ENSMUST00000179088	processed_pseudogene		7	1	31817113	997
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000173239	retained_intron		3	-1	89213877	497
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000206571	protein_coding		7	-1	3692986	347
ENSMUSG00000073980	unprocessed_pseudogene	Gm9574	ENSMUST00000173127	unprocessed_pseudogene		17	-1	36139105	845
ENSMUSG00000029621	protein_coding	Arpc1a	ENSMUST00000134835	processed_transcript		5	1	145083884	326
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000152789	protein_coding		3	-1	89213389	740
ENSMUSG00000069379	processed_pseudogene	Gm4950	ENSMUST00000091905	processed_pseudogene		18	-1	51865881	615
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000150303	retained_intron		3	-1	89213826	335
ENSMUSG00000118334	lincRNA	Gm50446	ENSMUST00000238114	lincRNA		18	-1	51927510	1204
ENSMUSG00000118334	lincRNA	Gm50446	ENSMUST00000237836	lincRNA		18	-1	51927551	1194
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000174324	processed_transcript		3	-1	89227088	630
ENSMUSG00000041645	protein_coding	Ddx24	ENSMUST00000110001	protein_coding	alternative2	12	-1	103425780	3063
ENSMUSG00000118351	processed_pseudogene	Gm50447	ENSMUST00000236725	processed_pseudogene		18	1	52061787	430
ENSMUSG00000118046	processed_pseudogene	Gm50448	ENSMUST00000235559	processed_pseudogene		18	1	52099464	583
ENSMUSG00000064068	protein_coding	Mtx1	ENSMUST00000239452	protein_coding	principal2	3	-1	89214335	1522
ENSMUSG00000034108	protein_coding	Ccs	ENSMUST00000236567	nonsense_mediated_decay		19	-1	4839254	760
ENSMUSG00000041645	protein_coding	Ddx24	ENSMUST00000222782	protein_coding		12	-1	103417335	527
ENSMUSG00000029621	protein_coding	Arpc1a	ENSMUST00000127694	nonsense_mediated_decay		5	1	145083906	1685
ENSMUSG00000042476	protein_coding	Abcb4	ENSMUST00000003717	protein_coding	principal1	5	1	8893717	4079
ENSMUSG00000041645	protein_coding	Ddx24	ENSMUST00000222715	retained_intron		12	-1	103410912	1646
ENSMUSG00000006599	protein_coding	Gtf2h1	ENSMUST00000006774	protein_coding	principal1	7	1	46796103	2736
ENSMUSG00000029621	protein_coding	Arpc1a	ENSMUST00000124379	protein_coding		5	1	145084100	588
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000206343	nonsense_mediated_decay		7	-1	3692888	641
ENSMUSG00000041645	protein_coding	Ddx24	ENSMUST00000221211	protein_coding	alternative2	12	-1	103425824	2669
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000118710	protein_coding		7	-1	3692888	498
ENSMUSG00000034108	protein_coding	Ccs	ENSMUST00000238136	nonsense_mediated_decay		19	-1	4839219	706
ENSMUSG00000029621	protein_coding	Arpc1a	ENSMUST00000147564	retained_intron		5	1	145096257	425
ENSMUSG00000042476	protein_coding	Abcb4	ENSMUST00000197458	retained_intron		5	1	8893721	1979
ENSMUSG00000041645	protein_coding	Ddx24	ENSMUST00000220481	retained_intron		12	-1	103411433	386
ENSMUSG00000038311	lincRNA	2410017I17Rik	ENSMUST00000173025	lincRNA		17	1	36145018	1512
ENSMUSG00000042476	protein_coding	Abcb4	ENSMUST00000196067	protein_coding		5	1	8893949	2791
ENSMUSG00000034108	protein_coding	Ccs	ENSMUST00000236977	retained_intron		19	-1	4826309	540
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000206379	protein_coding		7	-1	3692762	595
ENSMUSG00000041645	protein_coding	Ddx24	ENSMUST00000220705	retained_intron		12	-1	103425830	4274
ENSMUSG00000042476	protein_coding	Abcb4	ENSMUST00000199954	retained_intron		5	1	8928726	3319
ENSMUSG00000034108	protein_coding	Ccs	ENSMUST00000235425	retained_intron		19	-1	4839286	520
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000150785	retained_intron		7	-1	3692962	3258
ENSMUSG00000041645	protein_coding	Ddx24	ENSMUST00000220975	non_stop_decay		12	-1	103425782	561
ENSMUSG00000042476	protein_coding	Abcb4	ENSMUST00000197150	retained_intron		5	1	8958552	680
ENSMUSG00000038311	lincRNA	2410017I17Rik	ENSMUST00000090537	lincRNA		17	1	36154847	2053
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000205644	retained_intron		7	-1	3692780	3399
ENSMUSG00000029621	protein_coding	Arpc1a	ENSMUST00000142276	retained_intron		5	1	145104273	926
ENSMUSG00000006599	protein_coding	Gtf2h1	ENSMUST00000165031	protein_coding		7	1	46796114	673
ENSMUSG00000034783	protein_coding	Cd207	ENSMUST00000037882	protein_coding	principal1	6	-1	83677857	1522
ENSMUSG00000041645	protein_coding	Ddx24	ENSMUST00000223233	protein_coding		12	-1	103425784	485
ENSMUSG00000038311	lincRNA	2410017I17Rik	ENSMUST00000056774	lincRNA		17	1	36145018	1509
ENSMUSG00000100646	unprocessed_pseudogene	Gm28193	ENSMUST00000189863	unprocessed_pseudogene		Y	-1	48700068	615
ENSMUSG00000105177	unprocessed_pseudogene	Gm43563	ENSMUST00000196761	unprocessed_pseudogene		5	1	145020178	198
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000150684	retained_intron		7	-1	3692938	2303
ENSMUSG00000113328	TEC	Gm47260	ENSMUST00000221358	TEC		12	-1	103415596	3105
ENSMUSG00000092289	processed_pseudogene	Gm6659	ENSMUST00000174752	processed_pseudogene		17	1	36157988	547
ENSMUSG00000035596	protein_coding	Mboat7	ENSMUST00000206448	retained_intron		7	-1	3692654	436
ENSMUSG00000006599	protein_coding	Gtf2h1	ENSMUST00000107644	protein_coding		7	1	46796671	2187
ENSMUSG00000092366	unprocessed_pseudogene	Gm17782	ENSMUST00000174345	unprocessed_pseudogene		17	-1	36162079	880
ENSMUSG00000104024	unprocessed_pseudogene	Gm33571	ENSMUST00000193271	unprocessed_pseudogene		Y	-1	26265649	657
ENSMUSG00000109988	processed_pseudogene	Gm45651	ENSMUST00000210857	processed_pseudogene		8	1	60757119	335
ENSMUSG00000055271	TEC	9330161L09Rik	ENSMUST00000238327	TEC		12	-1	103407976	1153
ENSMUSG00000055271	TEC	9330161L09Rik	ENSMUST00000056140	TEC		12	-1	103407820	999
ENSMUSG00000109797	processed_pseudogene	Stambp-ps2	ENSMUST00000209280	processed_pseudogene		8	1	60792221	1208
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000150168	processed_transcript		11	-1	5082340	493
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000205734	protein_coding		7	1	3692863	337
ENSMUSG00000110261	processed_pseudogene	Gm45485	ENSMUST00000211229	processed_pseudogene		8	1	60846312	357
ENSMUSG00000112323	lincRNA	Gm32828	ENSMUST00000219198	lincRNA		12	-1	7859691	2111
ENSMUSG00000081096	transcribed_processed_pseudogene	Gm12691	ENSMUST00000222516	processed_transcript		4	-1	98150261	918
ENSMUSG00000081096	transcribed_processed_pseudogene	Gm12691	ENSMUST00000120186	transcribed_processed_pseudogene		4	-1	98146599	456
ENSMUSG00000073403	transcribed_unprocessed_pseudogene	Gm10499	ENSMUST00000174778	retained_intron		17	-1	36145744	1698
ENSMUSG00000082388	processed_pseudogene	Gm12692	ENSMUST00000121092	processed_pseudogene		4	-1	98235290	546
ENSMUSG00000112323	lincRNA	Gm32828	ENSMUST00000218503	lincRNA		12	-1	7859766	708
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000073308	protein_coding		11	-1	5099067	2269
ENSMUSG00000073403	transcribed_unprocessed_pseudogene	Gm10499	ENSMUST00000174094	transcribed_unprocessed_pseudogene		17	-1	36145923	934
ENSMUSG00000112572	processed_pseudogene	Gm7530	ENSMUST00000218466	processed_pseudogene		10	1	63412999	605
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000151847	processed_transcript		11	-1	5099067	185
ENSMUSG00000039476	protein_coding	Prrx2	ENSMUST00000113592	protein_coding	alternative2	2	1	30834972	1070
ENSMUSG00000083644	processed_pseudogene	Gm12787	ENSMUST00000119234	processed_pseudogene		4	-1	98268575	396
ENSMUSG00000082324	processed_pseudogene	Gm14615	ENSMUST00000117575	processed_pseudogene		X	-1	42130723	1816
ENSMUSG00000086332	transcribed_unitary_pseudogene	4930480G23Rik	ENSMUST00000239390	processed_transcript		4	-1	20005671	2365
ENSMUSG00000086332	transcribed_unitary_pseudogene	4930480G23Rik	ENSMUST00000239440	transcribed_unitary_pseudogene		4	-1	19942938	381
ENSMUSG00000048185	protein_coding	Gm7075	ENSMUST00000054760	protein_coding	principal1	10	-1	63421789	425
ENSMUSG00000086332	transcribed_unitary_pseudogene	4930480G23Rik	ENSMUST00000125909	processed_transcript		4	-1	20005573	1387
ENSMUSG00000108427	antisense	Gm36696	ENSMUST00000205418	antisense		7	1	72110761	438
ENSMUSG00000006599	protein_coding	Gtf2h1	ENSMUST00000128420	nonsense_mediated_decay		7	1	46801687	1451
ENSMUSG00000101200	unprocessed_pseudogene	Gm20802	ENSMUST00000190832	unprocessed_pseudogene		Y	-1	48737018	698
ENSMUSG00000006599	protein_coding	Gtf2h1	ENSMUST00000144708	retained_intron		7	1	46808452	739
ENSMUSG00000108493	sense_intronic	Gm45715	ENSMUST00000206991	sense_intronic		7	-1	72157133	434
ENSMUSG00000109466	processed_pseudogene	Gm7587	ENSMUST00000207618	processed_pseudogene		7	-1	6534511	1021
ENSMUSG00000087298	processed_pseudogene	Gm9392	ENSMUST00000119337	processed_pseudogene		7	-1	46821417	554
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000102930	protein_coding	alternative1	11	-1	5099042	2174
ENSMUSG00000073233	processed_pseudogene	Nfyc-ps	ENSMUST00000101625	processed_pseudogene		12	1	7859900	1008
ENSMUSG00000039476	protein_coding	Prrx2	ENSMUST00000041659	protein_coding	principal2	2	1	30845059	1441
ENSMUSG00000082000	processed_pseudogene	Gm12488	ENSMUST00000122449	processed_pseudogene		3	1	100955441	499
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000063232	protein_coding		11	-1	5099096	1320
ENSMUSG00000099903	lincRNA	Gm29070	ENSMUST00000188541	lincRNA		Y	1	48787046	1499
ENSMUSG00000039476	protein_coding	Prrx2	ENSMUST00000150299	retained_intron		2	1	30845444	486
ENSMUSG00000039476	protein_coding	Prrx2	ENSMUST00000137924	retained_intron		2	1	30879319	678
ENSMUSG00000099903	lincRNA	Gm29070	ENSMUST00000187934	lincRNA		Y	1	48787499	438
ENSMUSG00000073797	processed_pseudogene	Gm12650	ENSMUST00000121966	processed_pseudogene		4	1	93802333	258
ENSMUSG00000055737	protein_coding	Ghr	ENSMUST00000069451	protein_coding	principal1	15	-1	3583230	4175
ENSMUSG00000029620	protein_coding	1700018F24Rik	ENSMUST00000031624	protein_coding	principal1	5	1	145042990	1122
ENSMUSG00000101807	processed_pseudogene	Gm9120	ENSMUST00000190835	processed_pseudogene		7	1	31879045	994
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000144238	processed_transcript		11	-1	5086036	765
ENSMUSG00000081685	processed_pseudogene	Gm12647	ENSMUST00000118977	processed_pseudogene		4	1	94061373	265
ENSMUSG00000056696	protein_coding	Olfr1350	ENSMUST00000219278	protein_coding	principal1	7	1	6564841	1768
ENSMUSG00000055737	protein_coding	Ghr	ENSMUST00000161561	protein_coding	principal1	15	-1	3581842	2749
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000141002	processed_transcript		11	-1	5079528	1033
ENSMUSG00000081508	processed_pseudogene	Gm12654	ENSMUST00000120387	processed_pseudogene		4	1	94395658	587
ENSMUSG00000037085	protein_coding	Trmt12	ENSMUST00000036937	protein_coding	principal1	15	1	58872674	4454
ENSMUSG00000056696	protein_coding	Olfr1350	ENSMUST00000207221	protein_coding	principal1	7	1	6564841	1521
ENSMUSG00000009079	protein_coding	Ewsr1	ENSMUST00000139886	processed_transcript		11	-1	5079899	820
ENSMUSG00000110887	processed_pseudogene	Cbx3-ps8	ENSMUST00000214564	processed_pseudogene		9	1	7723147	548
ENSMUSG00000101534	unprocessed_pseudogene	Gm29306	ENSMUST00000191366	unprocessed_pseudogene		Y	-1	55073607	615
ENSMUSG00000056696	protein_coding	Olfr1350	ENSMUST00000070985	protein_coding	principal1	7	1	6569993	927
ENSMUSG00000085931	lincRNA	Gm12648	ENSMUST00000126270	lincRNA		4	-1	94425588	656
ENSMUSG00000113673	lincRNA	Gm47486	ENSMUST00000221075	lincRNA		13	1	10974423	3667
ENSMUSG00000031858	protein_coding	Mau2	ENSMUST00000050561	protein_coding	principal3	8	-1	70042734	5369
ENSMUSG00000101765	processed_pseudogene	Gm21673	ENSMUST00000186640	processed_pseudogene		7	1	31896505	436
ENSMUSG00000112615	processed_pseudogene	Gm18337	ENSMUST00000219023	processed_pseudogene		12	-1	7883870	5762
ENSMUSG00000055737	protein_coding	Ghr	ENSMUST00000110698	protein_coding		15	-1	3583188	1171
ENSMUSG00000101364	unprocessed_pseudogene	Gm29300	ENSMUST00000190738	unprocessed_pseudogene		Y	-1	55110564	696
ENSMUSG00000101270	unprocessed_pseudogene	Scgb2b9-ps	ENSMUST00000189522	unprocessed_pseudogene		7	-1	31917385	334
ENSMUSG00000112465	processed_pseudogene	Gm18387	ENSMUST00000220333	processed_pseudogene		12	1	7897573	702
ENSMUSG00000101248	unprocessed_pseudogene	Scgb1b9-ps	ENSMUST00000191567	unprocessed_pseudogene		7	1	31924345	266
ENSMUSG00000034777	protein_coding	Vax2	ENSMUST00000037807	protein_coding	principal1	6	1	83711264	1242
ENSMUSG00000055737	protein_coding	Ghr	ENSMUST00000110697	protein_coding		15	-1	3471644	1213
ENSMUSG00000112006	lincRNA	Gm48633	ENSMUST00000218264	lincRNA		12	-1	7950061	876
ENSMUSG00000108288	lincRNA	Gm44202	ENSMUST00000203549	lincRNA		6	-1	81986743	532
ENSMUSG00000101422	lincRNA	Gm29301	ENSMUST00000189344	lincRNA		Y	1	55151575	1502
ENSMUSG00000055737	protein_coding	Ghr	ENSMUST00000161770	protein_coding		15	-1	3582596	898
ENSMUSG00000020272	protein_coding	Stk10	ENSMUST00000102821	protein_coding	principal1	11	1	32533305	5026
ENSMUSG00000085794	antisense	Vax2os	ENSMUST00000123402	antisense		6	-1	83712201	1435
ENSMUSG00000108113	processed_transcript	Zim2	ENSMUST00000203572	lincRNA		7	-1	6662368	1158
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000186889	protein_coding	alternative2	6	-1	119196231	13162
ENSMUSG00000107412	lincRNA	Gm20383	ENSMUST00000204844	lincRNA		6	1	81984321	688
ENSMUSG00000101422	lincRNA	Gm29301	ENSMUST00000187383	lincRNA		Y	1	55152028	622
ENSMUSG00000020272	protein_coding	Stk10	ENSMUST00000143397	retained_intron		11	1	32588595	663
ENSMUSG00000101422	lincRNA	Gm29301	ENSMUST00000190850	lincRNA		Y	1	55152028	438
ENSMUSG00000108113	processed_transcript	Zim2	ENSMUST00000203156	retained_intron		7	-1	6658370	1099
ENSMUSG00000034330	protein_coding	Plcg2	ENSMUST00000081232	protein_coding	principal1	8	1	117498291	4298
ENSMUSG00000107412	lincRNA	Gm20383	ENSMUST00000203799	lincRNA		6	1	81990841	1227
ENSMUSG00000085794	antisense	Vax2os	ENSMUST00000155159	antisense		6	-1	83710932	4063
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000191196	processed_transcript		6	-1	118595426	2374
ENSMUSG00000100926	processed_pseudogene	Gm5329	ENSMUST00000186898	processed_pseudogene		7	-1	31972567	463
ENSMUSG00000050944	protein_coding	Efcab5	ENSMUST00000108400	protein_coding	principal1	11	-1	77188968	4654
ENSMUSG00000105054	processed_pseudogene	Gm43664	ENSMUST00000196038	processed_pseudogene		5	-1	52919209	734
ENSMUSG00000055737	protein_coding	Ghr	ENSMUST00000160343	processed_transcript		15	-1	3583188	472
ENSMUSG00000108994	transcribed_unprocessed_pseudogene	Gm31663	ENSMUST00000208481	transcribed_unprocessed_pseudogene		7	1	92979876	1190
ENSMUSG00000108994	transcribed_unprocessed_pseudogene	Gm31663	ENSMUST00000207656	processed_transcript		7	1	92982052	1524
ENSMUSG00000085794	antisense	Vax2os	ENSMUST00000150233	antisense		6	-1	83703543	595
ENSMUSG00000055737	protein_coding	Ghr	ENSMUST00000162993	retained_intron		15	-1	3583212	1794
ENSMUSG00000055737	protein_coding	Ghr	ENSMUST00000159508	processed_transcript		15	-1	3583211	598
ENSMUSG00000085794	antisense	Vax2os	ENSMUST00000173883	antisense		6	-1	83703622	600
ENSMUSG00000037075	protein_coding	Rnf139	ENSMUST00000036904	protein_coding	principal1	15	1	58889229	4348
ENSMUSG00000097596	antisense	Gm26673	ENSMUST00000181126	antisense		6	1	126718684	3377
ENSMUSG00000050944	protein_coding	Efcab5	ENSMUST00000148985	retained_intron		11	-1	77137793	3322
ENSMUSG00000055737	protein_coding	Ghr	ENSMUST00000161180	retained_intron		15	-1	3583492	2481
ENSMUSG00000024260	protein_coding	Sap130	ENSMUST00000235017	protein_coding	alternative1	18	1	31634371	4030
ENSMUSG00000050944	protein_coding	Efcab5	ENSMUST00000155085	processed_transcript		11	-1	77168916	253
ENSMUSG00000113593	transcribed_unprocessed_pseudogene	Zp4-ps	ENSMUST00000222293	processed_transcript		13	1	11522052	922
ENSMUSG00000037075	protein_coding	Rnf139	ENSMUST00000226908	processed_transcript		15	1	58900137	1744
ENSMUSG00000038077	protein_coding	Kcna6	ENSMUST00000040751	nonsense_mediated_decay		6	-1	126740662	5827
ENSMUSG00000055737	protein_coding	Ghr	ENSMUST00000159912	processed_transcript		15	-1	3583187	738
ENSMUSG00000050944	protein_coding	Efcab5	ENSMUST00000130901	protein_coding		11	-1	77151925	3190
ENSMUSG00000113593	transcribed_unprocessed_pseudogene	Zp4-ps	ENSMUST00000220980	transcribed_unprocessed_pseudogene		13	1	11522053	1561
ENSMUSG00000087128	processed_transcript	Gm12655	ENSMUST00000133884	processed_transcript		4	-1	94477180	925
ENSMUSG00000113799	TEC	Gm47487	ENSMUST00000221403	TEC		13	-1	11523744	649
ENSMUSG00000038077	protein_coding	Kcna6	ENSMUST00000128137	processed_transcript		6	-1	126736811	2080
ENSMUSG00000033159	protein_coding	Cnppd1	ENSMUST00000168720	protein_coding	principal1	1	-1	75142638	3669
ENSMUSG00000031858	protein_coding	Mau2	ENSMUST00000212401	retained_intron		8	-1	70042700	4269
ENSMUSG00000087128	processed_transcript	Gm12655	ENSMUST00000127678	processed_transcript		4	-1	94477167	523
ENSMUSG00000050944	protein_coding	Efcab5	ENSMUST00000151731	retained_intron		11	-1	77103062	817
ENSMUSG00000046683	antisense	0610025J13Rik	ENSMUST00000131516	antisense		4	1	98321448	707
ENSMUSG00000082550	processed_pseudogene	Gm12344	ENSMUST00000117087	processed_pseudogene		11	-1	77108180	329
ENSMUSG00000032776	protein_coding	Mctp2	ENSMUST00000079323	protein_coding	principal1	7	-1	72306608	5802
ENSMUSG00000101039	unprocessed_pseudogene	Scgb2b29-ps	ENSMUST00000187539	unprocessed_pseudogene		7	-1	32014798	331
ENSMUSG00000038077	protein_coding	Kcna6	ENSMUST00000112242	protein_coding	principal1	6	-1	126740151	3464
ENSMUSG00000046683	antisense	0610025J13Rik	ENSMUST00000131324	antisense		4	1	98321398	652
ENSMUSG00000114893	lincRNA	Gm48684	ENSMUST00000224166	lincRNA		13	1	107034284	340
ENSMUSG00000024260	protein_coding	Sap130	ENSMUST00000234769	retained_intron		18	1	31634379	4176
ENSMUSG00000046683	antisense	0610025J13Rik	ENSMUST00000180374	antisense		4	1	98321448	713
ENSMUSG00000071181	processed_transcript	3830408C21Rik	ENSMUST00000225489	lincRNA		13	1	107022553	1810
ENSMUSG00000024260	protein_coding	Sap130	ENSMUST00000234846	protein_coding		18	1	31635085	400
ENSMUSG00000038077	protein_coding	Kcna6	ENSMUST00000185333	protein_coding	principal1	6	-1	126740674	5836
ENSMUSG00000032776	protein_coding	Mctp2	ENSMUST00000206466	protein_coding		7	-1	72110583	470
ENSMUSG00000031858	protein_coding	Mau2	ENSMUST00000212308	protein_coding	alternative2	8	-1	70042700	2887
ENSMUSG00000082144	processed_pseudogene	Gm12788	ENSMUST00000119090	processed_pseudogene		4	1	98352427	308
ENSMUSG00000033159	protein_coding	Cnppd1	ENSMUST00000190679	protein_coding	principal1	1	-1	75141691	2062
ENSMUSG00000024260	protein_coding	Sap130	ENSMUST00000234461	retained_intron		18	1	31635128	3825
ENSMUSG00000071181	processed_transcript	3830408C21Rik	ENSMUST00000225426	lincRNA		13	1	107022570	1898
ENSMUSG00000024260	protein_coding	Sap130	ENSMUST00000234772	protein_coding		18	1	31635179	561
ENSMUSG00000020396	protein_coding	Nefh	ENSMUST00000093369	protein_coding	principal1	11	-1	4948064	3994
ENSMUSG00000032776	protein_coding	Mctp2	ENSMUST00000205410	nonsense_mediated_decay		7	-1	72162374	383
ENSMUSG00000070847	protein_coding	Vmn2r30	ENSMUST00000232929	retained_intron		7	-1	7337609	8405
ENSMUSG00000031858	protein_coding	Mau2	ENSMUST00000212845	nonsense_mediated_decay		8	-1	70042695	2818
ENSMUSG00000033159	protein_coding	Cnppd1	ENSMUST00000189043	retained_intron		1	-1	75138876	2402
ENSMUSG00000071181	processed_transcript	3830408C21Rik	ENSMUST00000223895	lincRNA		13	1	107023043	1689
ENSMUSG00000031858	protein_coding	Mau2	ENSMUST00000212451	protein_coding	alternative2	8	-1	70042734	1931
ENSMUSG00000024260	protein_coding	Sap130	ENSMUST00000025109	protein_coding	principal2	18	1	31634383	4015
ENSMUSG00000071181	processed_transcript	3830408C21Rik	ENSMUST00000224293	lincRNA		13	1	107025892	822
ENSMUSG00000033159	protein_coding	Cnppd1	ENSMUST00000041213	protein_coding	principal1	1	-1	75142697	2429
ENSMUSG00000032776	protein_coding	Mctp2	ENSMUST00000206976	retained_intron		7	-1	72229360	2834
ENSMUSG00000071181	processed_transcript	3830408C21Rik	ENSMUST00000095459	retained_intron		13	1	107031963	1711
ENSMUSG00000032776	protein_coding	Mctp2	ENSMUST00000206755	retained_intron		7	-1	72306608	4431
ENSMUSG00000097644	sense_overlapping	Gm26862	ENSMUST00000181886	sense_overlapping		7	1	93006982	2191
ENSMUSG00000031858	protein_coding	Mau2	ENSMUST00000212055	retained_intron		8	-1	70042700	1711
ENSMUSG00000071181	processed_transcript	3830408C21Rik	ENSMUST00000224838	lincRNA		13	1	107032880	714
ENSMUSG00000033159	protein_coding	Cnppd1	ENSMUST00000187888	retained_intron		1	-1	75137861	684
ENSMUSG00000069315	processed_pseudogene	Gm7731	ENSMUST00000091759	processed_pseudogene		16	-1	15217328	470
ENSMUSG00000031858	protein_coding	Mau2	ENSMUST00000212596	retained_intron		8	-1	70034514	2451
ENSMUSG00000089871	antisense	Speer4cos	ENSMUST00000162113	antisense		5	1	15680710	1083
ENSMUSG00000033159	protein_coding	Cnppd1	ENSMUST00000188037	retained_intron		1	-1	75137806	404
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000102956	protein_coding	principal3	14	-1	26534931	5476
ENSMUSG00000024260	protein_coding	Sap130	ENSMUST00000178164	protein_coding	alternative1	18	1	31634371	4030
ENSMUSG00000020430	protein_coding	Pes1	ENSMUST00000109985	protein_coding	alternative2	11	1	3963975	2923
ENSMUSG00000116213	processed_pseudogene	Gm5404	ENSMUST00000228992	processed_pseudogene		16	1	15218844	1826
ENSMUSG00000033159	protein_coding	Cnppd1	ENSMUST00000189403	protein_coding		1	-1	75141803	633
ENSMUSG00000109606	TEC	Gm45537	ENSMUST00000211539	TEC		8	-1	47227166	2708
ENSMUSG00000051515	protein_coding	Fam181b	ENSMUST00000051179	protein_coding	principal1	7	1	93079865	2003
ENSMUSG00000031858	protein_coding	Mau2	ENSMUST00000168013	protein_coding	alternative2	8	-1	70042685	5323
ENSMUSG00000040146	protein_coding	Rgl3	ENSMUST00000214026	nonsense_mediated_decay		9	-1	21989434	3364
ENSMUSG00000044199	protein_coding	S1pr4	ENSMUST00000053646	protein_coding	principal1	10	-1	81500132	2386
ENSMUSG00000073208	protein_coding	Speer4c	ENSMUST00000095005	protein_coding	principal1	5	-1	15714236	1159
ENSMUSG00000033159	protein_coding	Cnppd1	ENSMUST00000189809	protein_coding		1	-1	75142711	431
ENSMUSG00000054061	antisense	Gm9934	ENSMUST00000098303	antisense		7	-1	93081027	2077
ENSMUSG00000073208	protein_coding	Speer4c	ENSMUST00000179506	protein_coding		5	-1	15714271	480
ENSMUSG00000020430	protein_coding	Pes1	ENSMUST00000130973	processed_transcript		11	1	3964009	497
ENSMUSG00000026766	protein_coding	Mmadhc	ENSMUST00000102769	protein_coding	principal1	2	-1	50296717	1342
ENSMUSG00000080704	processed_pseudogene	Gm6031	ENSMUST00000121314	processed_pseudogene		16	1	15426151	1054
ENSMUSG00000054061	antisense	Gm9934	ENSMUST00000191246	antisense		7	-1	93080794	1713
ENSMUSG00000034206	protein_coding	Polq	ENSMUST00000183112	nonsense_mediated_decay		16	1	37011786	7386
ENSMUSG00000114311	lincRNA	Gm31452	ENSMUST00000224811	lincRNA		13	1	107063693	1525
ENSMUSG00000072731	unprocessed_pseudogene	Gm3715	ENSMUST00000172308	unprocessed_pseudogene		14	-1	7229138	617
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000112331	protein_coding		14	-1	26473954	3796
ENSMUSG00000020430	protein_coding	Pes1	ENSMUST00000137544	processed_transcript		11	1	3964049	879
ENSMUSG00000118420	transcribed_unitary_pseudogene	Gm29788	ENSMUST00000238666	transcribed_unitary_pseudogene		6	-1	126810644	892
ENSMUSG00000118420	transcribed_unitary_pseudogene	Gm29788	ENSMUST00000238440	processed_transcript		6	-1	126804370	475
ENSMUSG00000070847	protein_coding	Vmn2r30	ENSMUST00000174368	protein_coding		7	-1	7337609	5052
ENSMUSG00000026766	protein_coding	Mmadhc	ENSMUST00000133768	protein_coding		2	-1	50296801	711
ENSMUSG00000114311	lincRNA	Gm31452	ENSMUST00000224729	lincRNA		13	1	107063695	843
ENSMUSG00000020430	protein_coding	Pes1	ENSMUST00000020705	protein_coding	principal2	11	1	3963975	2911
ENSMUSG00000094242	processed_pseudogene	Gm5456	ENSMUST00000170706	processed_pseudogene		14	1	7241442	844
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000145738	protein_coding		14	-1	26460185	3155
ENSMUSG00000114475	processed_pseudogene	Gm2726	ENSMUST00000223896	processed_pseudogene		13	-1	107280191	577
ENSMUSG00000070847	protein_coding	Vmn2r30	ENSMUST00000072475	protein_coding	principal1	7	-1	7337609	4512
ENSMUSG00000114459	processed_pseudogene	Gm2736	ENSMUST00000224355	processed_pseudogene		13	1	107348204	313
ENSMUSG00000050844	protein_coding	1700020N01Rik	ENSMUST00000057341	protein_coding	principal1	10	1	21593145	1062
ENSMUSG00000082816	processed_pseudogene	Gm11953	ENSMUST00000122352	processed_pseudogene		11	1	3951714	1003
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000090359	protein_coding	alternative1	14	-1	26533618	4076
ENSMUSG00000050844	protein_coding	1700020N01Rik	ENSMUST00000186635	processed_transcript		10	1	21616320	194
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000112330	protein_coding	alternative1	14	-1	26533618	3962
ENSMUSG00000049233	processed_pseudogene	Apoo-ps	ENSMUST00000061241	processed_pseudogene		13	-1	107414729	586
ENSMUSG00000034493	protein_coding	4930556J24Rik	ENSMUST00000042344	protein_coding	principal1	11	-1	3976778	1220
ENSMUSG00000046133	protein_coding	C130073F10Rik	ENSMUST00000051043	protein_coding	principal1	4	-1	101893789	913
ENSMUSG00000109654	transcribed_unprocessed_pseudogene	Gm3912	ENSMUST00000210164	processed_transcript		7	-1	7374624	643
ENSMUSG00000109654	transcribed_unprocessed_pseudogene	Gm3912	ENSMUST00000173575	processed_transcript		7	-1	7368803	2308
ENSMUSG00000109654	transcribed_unprocessed_pseudogene	Gm3912	ENSMUST00000211024	transcribed_unprocessed_pseudogene		7	-1	7370698	367
ENSMUSG00000038135	protein_coding	Crygn	ENSMUST00000123386	processed_transcript		5	-1	24751324	221
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000065504	protein_coding	principal2	14	-1	20480133	2851
ENSMUSG00000109766	TEC	Gm45415	ENSMUST00000209644	TEC		7	1	7311309	2074
ENSMUSG00000103462	lincRNA	Gm32181	ENSMUST00000194268	lincRNA		Y	-1	26329160	1495
ENSMUSG00000084208	processed_pseudogene	Gm12792	ENSMUST00000117669	processed_pseudogene		4	-1	101896982	1019
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000100844	protein_coding	alternative2	14	-1	20480121	2904
ENSMUSG00000110139	protein_coding	Gm45783	ENSMUST00000210877	nonsense_mediated_decay	principal1	7	-1	7374573	656
ENSMUSG00000037028	protein_coding	Gm12800	ENSMUST00000075999	protein_coding	principal1	4	1	101909121	1455
ENSMUSG00000011256	protein_coding	Adam19	ENSMUST00000011400	protein_coding	principal1	11	1	46055992	6383
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000139075	protein_coding	alternative1	14	-1	26534895	4508
ENSMUSG00000100972	protein_coding	Gm28553	ENSMUST00000185924	protein_coding	principal1	Y	1	48856497	923
ENSMUSG00000083203	processed_pseudogene	Gm11421	ENSMUST00000122124	processed_pseudogene		11	1	82725143	294
ENSMUSG00000081828	processed_pseudogene	Gm11420	ENSMUST00000120047	processed_pseudogene		11	-1	82746205	402
ENSMUSG00000103462	lincRNA	Gm32181	ENSMUST00000192820	lincRNA		Y	-1	26328708	615
ENSMUSG00000103462	lincRNA	Gm32181	ENSMUST00000195871	lincRNA		Y	-1	26328708	431
ENSMUSG00000083371	processed_pseudogene	Gm11422	ENSMUST00000118925	processed_pseudogene		11	1	82728000	1103
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000142679	protein_coding		14	-1	26460172	1565
ENSMUSG00000101467	unprocessed_pseudogene	Gm28662	ENSMUST00000188446	unprocessed_pseudogene		Y	1	26367907	695
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000029682	protein_coding	principal2	3	1	89215180	3190
ENSMUSG00000070890	protein_coding	Gm12794	ENSMUST00000052027	protein_coding	principal1	4	1	101940407	1452
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000224975	protein_coding	principal2	14	-1	20479911	2727
ENSMUSG00000090215	protein_coding	Trim34b	ENSMUST00000106847	protein_coding	principal2	7	1	104329471	1827
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000142051	protein_coding		3	1	89215205	435
ENSMUSG00000112474	processed_pseudogene	Gm46209	ENSMUST00000217912	processed_pseudogene		10	1	7458356	553
ENSMUSG00000038135	protein_coding	Crygn	ENSMUST00000047119	protein_coding	principal1	5	-1	24758008	768
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000225941	protein_coding		14	-1	20464946	739
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000226001	retained_intron		14	-1	20459169	673
ENSMUSG00000090215	protein_coding	Trim34b	ENSMUST00000180136	protein_coding	alternative2	7	1	104329471	1535
ENSMUSG00000034308	protein_coding	Sdr42e1	ENSMUST00000037955	protein_coding	principal1	8	-1	117671547	2867
ENSMUSG00000078626	protein_coding	Gm12790	ENSMUST00000106916	protein_coding	principal1	4	-1	101981049	951
ENSMUSG00000011256	protein_coding	Adam19	ENSMUST00000151565	processed_transcript		11	1	46127905	1747
ENSMUSG00000011256	protein_coding	Adam19	ENSMUST00000153410	retained_intron		11	1	46134122	816
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000108630	protein_coding		7	1	3693375	1779
ENSMUSG00000087389	antisense	Gm15592	ENSMUST00000143135	antisense		6	-1	18289048	1707
ENSMUSG00000080767	processed_pseudogene	Gm15595	ENSMUST00000120840	processed_pseudogene		6	1	18294271	961
ENSMUSG00000026766	protein_coding	Mmadhc	ENSMUST00000147345	processed_transcript		2	-1	50296695	1351
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000123088	protein_coding		7	1	3693602	720
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000188181	processed_transcript		6	-1	118757974	7577
ENSMUSG00000056716	lincRNA	Gm5420	ENSMUST00000187019	lincRNA		10	1	21686411	533
ENSMUSG00000011256	protein_coding	Adam19	ENSMUST00000137014	processed_transcript		11	1	46056058	453
ENSMUSG00000021413	protein_coding	Prpf4b	ENSMUST00000077853	protein_coding	principal1	13	1	34875302	7844
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000224410	retained_intron		14	-1	20479908	2653
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000078320	protein_coding	alternative2	6	-1	119108189	8062
ENSMUSG00000034308	protein_coding	Sdr42e1	ENSMUST00000173522	protein_coding	principal1	8	-1	117673689	2615
ENSMUSG00000056716	lincRNA	Gm5420	ENSMUST00000071008	lincRNA		10	1	21690845	2206
ENSMUSG00000087607	antisense	Gm16034	ENSMUST00000156446	antisense		11	-1	46145014	480
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000223960	retained_intron		14	-1	20469467	387
ENSMUSG00000026766	protein_coding	Mmadhc	ENSMUST00000134480	processed_transcript		2	-1	50296687	803
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000205287	protein_coding		7	1	3693763	1375
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000225118	retained_intron		14	-1	20471436	761
ENSMUSG00000086998	antisense	Gm16033	ENSMUST00000144915	antisense		11	-1	46147116	596
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000223681	retained_intron		14	-1	20471463	420
ENSMUSG00000021413	protein_coding	Prpf4b	ENSMUST00000221639	retained_intron		13	1	34875504	1727
ENSMUSG00000026766	protein_coding	Mmadhc	ENSMUST00000140563	processed_transcript		2	-1	50296676	927
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000038521	protein_coding	principal1	7	1	3693765	1365
ENSMUSG00000026766	protein_coding	Mmadhc	ENSMUST00000154254	processed_transcript		2	-1	50296423	753
ENSMUSG00000056632	protein_coding	Dsg3	ENSMUST00000070892	protein_coding	principal2	18	1	20510274	6212
ENSMUSG00000040146	protein_coding	Rgl3	ENSMUST00000214089	retained_intron		9	-1	21989445	3184
ENSMUSG00000034308	protein_coding	Sdr42e1	ENSMUST00000174450	protein_coding		8	-1	117673689	819
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000224344	retained_intron		14	-1	20479941	988
ENSMUSG00000026766	protein_coding	Mmadhc	ENSMUST00000144143	protein_coding		2	-1	50296681	1079
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000075591	protein_coding	alternative2	6	-1	119108189	7584
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000139396	retained_intron		7	1	3693801	1162
ENSMUSG00000024510	protein_coding	Ftmt	ENSMUST00000025388	protein_coding	principal1	18	1	52331549	1448
ENSMUSG00000021814	protein_coding	Anxa7	ENSMUST00000225132	protein_coding		14	-1	20479941	364
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000136635	processed_transcript		14	-1	26442824	886
ENSMUSG00000026766	protein_coding	Mmadhc	ENSMUST00000152948	processed_transcript		2	-1	50289199	428
ENSMUSG00000056632	protein_coding	Dsg3	ENSMUST00000234945	protein_coding	alternative2	18	1	20510283	3482
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000127078	processed_transcript		14	-1	26442655	604
ENSMUSG00000109663	processed_pseudogene	Gm45308	ENSMUST00000210610	processed_pseudogene		7	1	46832464	415
ENSMUSG00000033222	protein_coding	Ttf2	ENSMUST00000076941	protein_coding	principal1	3	-1	100969663	4541
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000126315	retained_intron		3	1	89215227	4034
ENSMUSG00000040146	protein_coding	Rgl3	ENSMUST00000045726	protein_coding	principal1	9	-1	21989446	2543
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000136625	retained_intron		14	-1	26430101	620
ENSMUSG00000022878	protein_coding	Adipoq	ENSMUST00000023593	protein_coding	principal1	16	1	23146536	1292
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000108629	protein_coding		7	1	3693809	1238
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000119084	protein_coding	alternative2	3	1	89215233	2993
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000125437	processed_transcript		14	-1	26442890	501
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000146435	retained_intron		3	1	89217420	779
ENSMUSG00000033222	protein_coding	Ttf2	ENSMUST00000145811	retained_intron		3	-1	100946357	747
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000134117	retained_intron		14	-1	26439221	377
ENSMUSG00000022878	protein_coding	Adipoq	ENSMUST00000171309	protein_coding		16	1	23146646	539
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000142713	protein_coding		7	1	3693829	709
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000126700	processed_transcript		3	1	89221152	455
ENSMUSG00000040146	protein_coding	Rgl3	ENSMUST00000215851	nonsense_mediated_decay		9	-1	21989415	2577
ENSMUSG00000040146	protein_coding	Rgl3	ENSMUST00000214713	retained_intron		9	-1	21989445	2937
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000144980	retained_intron		3	1	89224140	745
ENSMUSG00000087192	processed_transcript	4930412L05Rik	ENSMUST00000146501	processed_transcript		4	-1	53217561	1241
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000137204	protein_coding		7	1	3694298	480
ENSMUSG00000040146	protein_coding	Rgl3	ENSMUST00000213558	retained_intron		9	-1	21974283	523
ENSMUSG00000050891	protein_coding	Tatdn1	ENSMUST00000110155	protein_coding		15	-1	58933730	1364
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000136881	nonsense_mediated_decay		3	1	89224289	776
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000129920	retained_intron		14	-1	26442738	1824
ENSMUSG00000087192	processed_transcript	4930412L05Rik	ENSMUST00000139222	processed_transcript		4	-1	53217857	663
ENSMUSG00000041205	protein_coding	Map6d1	ENSMUST00000040880	protein_coding	principal1	16	-1	20241358	3280
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000155060	nonsense_mediated_decay		7	1	3694508	931
ENSMUSG00000096183	protein_coding	Gm3727	ENSMUST00000168458	protein_coding	principal5	14	-1	7264714	995
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000146438	protein_coding		14	-1	26463694	551
ENSMUSG00000040146	protein_coding	Rgl3	ENSMUST00000213130	retained_intron		9	-1	21977421	705
ENSMUSG00000096183	protein_coding	Gm3727	ENSMUST00000178251	protein_coding	alternative2	14	-1	7264653	618
ENSMUSG00000033222	protein_coding	Ttf2	ENSMUST00000127357	retained_intron		3	-1	100969663	4544
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000155924	retained_intron		3	1	89224330	739
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000144737	retained_intron		14	-1	26463685	659
ENSMUSG00000092383	unprocessed_pseudogene	H2-Pb	ENSMUST00000172731	unprocessed_pseudogene		17	-1	34076167	514
ENSMUSG00000033222	protein_coding	Ttf2	ENSMUST00000151697	protein_coding		3	-1	100952606	545
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000126372	retained_intron		3	1	89225177	426
ENSMUSG00000116913	antisense	Gm49566	ENSMUST00000231237	antisense		16	1	20241027	321
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000108627	protein_coding		7	1	3694523	1319
ENSMUSG00000033222	protein_coding	Ttf2	ENSMUST00000200506	retained_intron		3	-1	100959995	1236
ENSMUSG00000028047	protein_coding	Thbs3	ENSMUST00000153129	retained_intron		3	1	89226250	455
ENSMUSG00000109196	processed_pseudogene	Gm44715	ENSMUST00000209049	processed_pseudogene		7	1	93168834	3839
ENSMUSG00000021870	protein_coding	Slmap	ENSMUST00000038522	protein_coding	principal3	14	-1	26533740	4501
ENSMUSG00000091472	protein_coding	Gm3739	ENSMUST00000165744	protein_coding	principal1	14	-1	7315049	2011
ENSMUSG00000105692	TEC	Gm43737	ENSMUST00000199915	TEC		3	1	89210425	2740
ENSMUSG00000083519	processed_pseudogene	Gm13674	ENSMUST00000121276	processed_pseudogene		2	1	80131930	823
ENSMUSG00000035585	protein_coding	Tsen34	ENSMUST00000147288	protein_coding		7	1	3695189	327
ENSMUSG00000078128	processed_pseudogene	Gm2178	ENSMUST00000104927	processed_pseudogene		14	1	26514554	357
ENSMUSG00000104360	processed_pseudogene	Gm8762	ENSMUST00000193486	processed_pseudogene		1	-1	136789520	339
ENSMUSG00000085656	lincRNA	Gm13180	ENSMUST00000141222	lincRNA		2	1	3855030	440
ENSMUSG00000087412	transcribed_processed_pseudogene	Gm15501	ENSMUST00000133910	processed_transcript		7	-1	93184176	849
ENSMUSG00000103953	processed_pseudogene	Gm29718	ENSMUST00000193396	processed_pseudogene		1	1	136793034	477
ENSMUSG00000087412	transcribed_processed_pseudogene	Gm15501	ENSMUST00000140687	transcribed_processed_pseudogene		7	-1	93179645	625
ENSMUSG00000086445	lincRNA	Gm13191	ENSMUST00000136489	lincRNA		2	-1	3929139	416
ENSMUSG00000109175	lincRNA	Gm44947	ENSMUST00000208462	lincRNA		7	-1	93323950	1981
ENSMUSG00000104261	processed_pseudogene	Gm17781	ENSMUST00000195232	processed_pseudogene		1	-1	136798959	649
ENSMUSG00000025156	protein_coding	Gps1	ENSMUST00000100134	protein_coding		11	1	120784275	1925
ENSMUSG00000079685	protein_coding	Ulbp1	ENSMUST00000218087	protein_coding	alternative2	10	-1	7473361	5959
ENSMUSG00000063130	protein_coding	Calml3	ENSMUST00000077698	protein_coding	principal1	13	-1	3804316	1421
ENSMUSG00000098197	antisense	BC051537	ENSMUST00000183290	antisense		17	-1	34095309	1668
ENSMUSG00000036815	protein_coding	Dpp10	ENSMUST00000112606	protein_coding	principal2	1	-1	124045559	15297
ENSMUSG00000063130	protein_coding	Calml3	ENSMUST00000222976	protein_coding		13	-1	3804062	509
ENSMUSG00000024528	protein_coding	Srfbp1	ENSMUST00000237229	nonsense_mediated_decay		18	1	52465693	702
ENSMUSG00000098197	antisense	BC051537	ENSMUST00000237731	antisense		17	-1	34095282	1801
ENSMUSG00000036815	protein_coding	Dpp10	ENSMUST00000112603	protein_coding	alternative2	1	-1	124045163	4477
ENSMUSG00000036815	protein_coding	Dpp10	ENSMUST00000239072	protein_coding	alternative1	1	-1	124846039	4759
ENSMUSG00000118249	lincRNA	Gm36608	ENSMUST00000236650	lincRNA		19	-1	3708176	571
ENSMUSG00000050891	protein_coding	Tatdn1	ENSMUST00000227540	nonsense_mediated_decay		15	-1	58933738	1819
ENSMUSG00000098241	unprocessed_pseudogene	H2-Pa	ENSMUST00000182803	unprocessed_pseudogene		17	1	34084601	697
ENSMUSG00000036815	protein_coding	Dpp10	ENSMUST00000187202	processed_transcript		1	-1	123650360	285
ENSMUSG00000050891	protein_coding	Tatdn1	ENSMUST00000228538	protein_coding	principal1	15	-1	58933727	915
ENSMUSG00000025156	protein_coding	Gps1	ENSMUST00000208737	protein_coding	alternative1	11	1	120784285	1843
ENSMUSG00000021413	protein_coding	Prpf4b	ENSMUST00000222509	nonsense_mediated_decay		13	1	34875611	3648
ENSMUSG00000036815	protein_coding	Dpp10	ENSMUST00000140361	processed_transcript		1	-1	124045255	656
ENSMUSG00000036815	protein_coding	Dpp10	ENSMUST00000187286	processed_transcript		1	-1	124846039	1443
ENSMUSG00000024528	protein_coding	Srfbp1	ENSMUST00000025406	protein_coding	principal1	18	1	52465693	2656
ENSMUSG00000079685	protein_coding	Ulbp1	ENSMUST00000177585	protein_coding	principal2	10	-1	7473638	3815
ENSMUSG00000033765	protein_coding	Calm4	ENSMUST00000042219	protein_coding	principal1	13	1	3837757	917
ENSMUSG00000102801	TEC	Gm37478	ENSMUST00000193624	TEC		1	-1	123367234	3495
ENSMUSG00000021413	protein_coding	Prpf4b	ENSMUST00000220965	nonsense_mediated_decay		13	1	34888201	2572
ENSMUSG00000021131	protein_coding	Erh	ENSMUST00000021559	protein_coding	principal1	12	-1	80644341	1293
ENSMUSG00000103914	TEC	Gm38073	ENSMUST00000195141	TEC		1	-1	124379242	3665
ENSMUSG00000028436	protein_coding	Dcaf12	ENSMUST00000030145	protein_coding	principal1	4	-1	41314889	3442
ENSMUSG00000114091	sense_overlapping	Gm40655	ENSMUST00000220802	sense_overlapping		13	1	3825519	1880
ENSMUSG00000025156	protein_coding	Gps1	ENSMUST00000116305	protein_coding	alternative1	11	1	120784305	1827
ENSMUSG00000101985	processed_pseudogene	Gm28929	ENSMUST00000185330	processed_pseudogene		1	1	123756558	1193
ENSMUSG00000079685	protein_coding	Ulbp1	ENSMUST00000169796	protein_coding	alternative2	10	-1	7473341	1093
ENSMUSG00000021413	protein_coding	Prpf4b	ENSMUST00000221077	nonsense_mediated_decay		13	1	34892124	791
ENSMUSG00000102902	TEC	Gm38263	ENSMUST00000195879	TEC		1	-1	123562441	3059
ENSMUSG00000021131	protein_coding	Erh	ENSMUST00000166931	protein_coding		12	-1	80643832	506
ENSMUSG00000117533	processed_pseudogene	Gm50060	ENSMUST00000234849	processed_pseudogene		18	1	31738715	325
ENSMUSG00000050891	protein_coding	Tatdn1	ENSMUST00000226707	nonsense_mediated_decay		15	-1	58933738	922
ENSMUSG00000102240	TEC	Gm37717	ENSMUST00000192647	TEC		1	-1	124827728	3027
ENSMUSG00000021413	protein_coding	Prpf4b	ENSMUST00000223228	processed_transcript		13	1	34901649	520
ENSMUSG00000021131	protein_coding	Erh	ENSMUST00000218364	protein_coding		12	-1	80643848	665
ENSMUSG00000099749	lincRNA	Gm29323	ENSMUST00000189792	lincRNA		10	1	21743867	332
ENSMUSG00000021413	protein_coding	Prpf4b	ENSMUST00000221784	processed_transcript		13	1	34901931	958
ENSMUSG00000050891	protein_coding	Tatdn1	ENSMUST00000238706	nonsense_mediated_decay		15	-1	58916178	498
ENSMUSG00000025156	protein_coding	Gps1	ENSMUST00000172809	protein_coding	principal3	11	1	120784515	2000
ENSMUSG00000079685	protein_coding	Ulbp1	ENSMUST00000218736	processed_transcript		10	-1	7473587	1200
ENSMUSG00000101994	processed_pseudogene	Gm18875	ENSMUST00000188563	processed_pseudogene		1	-1	123805421	882
ENSMUSG00000024528	protein_coding	Srfbp1	ENSMUST00000238100	retained_intron		18	1	52465722	537
ENSMUSG00000021131	protein_coding	Erh	ENSMUST00000218740	protein_coding		12	-1	80644111	981
ENSMUSG00000021413	protein_coding	Prpf4b	ENSMUST00000221087	retained_intron		13	1	34902939	676
ENSMUSG00000079685	protein_coding	Ulbp1	ENSMUST00000218717	processed_transcript		10	-1	7473587	383
ENSMUSG00000050891	protein_coding	Tatdn1	ENSMUST00000226835	nonsense_mediated_decay		15	-1	58933738	1427
ENSMUSG00000025156	protein_coding	Gps1	ENSMUST00000144519	retained_intron		11	1	120786772	521
ENSMUSG00000024528	protein_coding	Srfbp1	ENSMUST00000235538	retained_intron		18	1	52465735	710
ENSMUSG00000021413	protein_coding	Prpf4b	ENSMUST00000221156	processed_transcript		13	1	34903109	419
ENSMUSG00000101260	unprocessed_pseudogene	Gm28780	ENSMUST00000190223	unprocessed_pseudogene		Y	1	26404738	615
ENSMUSG00000025156	protein_coding	Gps1	ENSMUST00000156723	retained_intron		11	1	120787769	567
ENSMUSG00000021131	protein_coding	Erh	ENSMUST00000218336	processed_transcript		12	-1	80643800	718
ENSMUSG00000101006	processed_pseudogene	Gm28299	ENSMUST00000189908	processed_pseudogene		1	-1	124615596	339
ENSMUSG00000050891	protein_coding	Tatdn1	ENSMUST00000226505	processed_transcript		15	-1	58933368	461
ENSMUSG00000038143	protein_coding	Stox2	ENSMUST00000079195	protein_coding	principal1	8	-1	47289402	10467
ENSMUSG00000102521	TEC	Gm37781	ENSMUST00000194773	TEC		1	-1	123460451	3218
ENSMUSG00000101105	unprocessed_pseudogene	Gm21755	ENSMUST00000191507	unprocessed_pseudogene		Y	1	26434218	696
ENSMUSG00000024528	protein_coding	Srfbp1	ENSMUST00000237092	retained_intron		18	1	52475379	882
ENSMUSG00000021413	protein_coding	Prpf4b	ENSMUST00000222834	processed_transcript		13	1	34903154	937
ENSMUSG00000050891	protein_coding	Tatdn1	ENSMUST00000226931	protein_coding		15	-1	58933706	220
ENSMUSG00000024528	protein_coding	Srfbp1	ENSMUST00000237434	retained_intron		18	1	52487450	550
ENSMUSG00000029312	protein_coding	Klhl8	ENSMUST00000112811	protein_coding		5	-1	103886290	2577
ENSMUSG00000029312	protein_coding	Klhl8	ENSMUST00000112815	protein_coding		5	-1	103886290	2898
ENSMUSG00000050891	protein_coding	Tatdn1	ENSMUST00000226141	retained_intron		15	-1	58933713	2089
ENSMUSG00000094133	protein_coding	Olfr1431	ENSMUST00000213759	protein_coding	principal1	19	1	12200634	3001
ENSMUSG00000050891	protein_coding	Tatdn1	ENSMUST00000228230	retained_intron		15	-1	58933694	1941
ENSMUSG00000098000	processed_pseudogene	Gm27026	ENSMUST00000183003	processed_pseudogene		18	-1	52473739	892
ENSMUSG00000094133	protein_coding	Olfr1431	ENSMUST00000214138	processed_transcript		19	1	12200805	2193
ENSMUSG00000057223	transcribed_processed_pseudogene	Gm6578	ENSMUST00000080891	processed_transcript		6	-1	12109583	984
ENSMUSG00000094133	protein_coding	Olfr1431	ENSMUST00000072316	protein_coding	principal1	19	1	12209568	939
ENSMUSG00000057223	transcribed_processed_pseudogene	Gm6578	ENSMUST00000203684	transcribed_processed_pseudogene		6	-1	12100269	560
ENSMUSG00000115463	protein_coding	Gm49356	ENSMUST00000228787	nonsense_mediated_decay	principal1	15	1	58889298	398
ENSMUSG00000099346	unprocessed_pseudogene	Gm20895	ENSMUST00000189601	unprocessed_pseudogene		Y	1	26508824	693
ENSMUSG00000109022	protein_coding	Olfr1432	ENSMUST00000207710	protein_coding	principal5	19	-1	12232596	2068
ENSMUSG00000116701	lincRNA	Gm30726	ENSMUST00000232268	lincRNA		16	1	76548795	1008
ENSMUSG00000019158	protein_coding	Tmem160	ENSMUST00000019302	protein_coding	principal1	7	1	16452779	815
ENSMUSG00000109022	protein_coding	Olfr1432	ENSMUST00000180978	protein_coding	alternative2	19	-1	12229544	930
ENSMUSG00000112394	processed_pseudogene	Gm48121	ENSMUST00000218410	processed_pseudogene		10	1	7577103	271
ENSMUSG00000105213	unprocessed_pseudogene	Gm43037	ENSMUST00000196808	unprocessed_pseudogene		5	1	142556444	250
ENSMUSG00000108209	processed_pseudogene	Gm32222	ENSMUST00000203296	processed_pseudogene		6	1	12128626	298
ENSMUSG00000067519	protein_coding	Olfr262	ENSMUST00000087818	protein_coding	principal1	19	-1	12241659	939
ENSMUSG00000038143	protein_coding	Stox2	ENSMUST00000211882	protein_coding		8	-1	47413837	9696
ENSMUSG00000019158	protein_coding	Tmem160	ENSMUST00000209536	nonsense_mediated_decay		7	1	16452963	699
ENSMUSG00000022354	protein_coding	Ndufb9	ENSMUST00000022980	protein_coding	principal1	15	1	58933756	704
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000112790	protein_coding	alternative2	6	-1	119108236	7631
ENSMUSG00000029312	protein_coding	Klhl8	ENSMUST00000031254	protein_coding	principal1	5	-1	103911259	3193
ENSMUSG00000022354	protein_coding	Ndufb9	ENSMUST00000228595	retained_intron		15	1	58933808	458
ENSMUSG00000087452	antisense	Gm11998	ENSMUST00000146304	antisense		11	1	11557421	972
ENSMUSG00000024334	protein_coding	H2-Oa	ENSMUST00000025192	protein_coding	principal1	17	1	34092340	1088
ENSMUSG00000029312	protein_coding	Klhl8	ENSMUST00000131843	nonsense_mediated_decay		5	-1	103886290	2283
ENSMUSG00000074516	processed_pseudogene	Gm10709	ENSMUST00000213318	processed_pseudogene		9	1	7751725	480
ENSMUSG00000108571	processed_pseudogene	Gm6855	ENSMUST00000206307	processed_pseudogene		7	1	4638536	790
ENSMUSG00000024334	protein_coding	H2-Oa	ENSMUST00000236684	retained_intron		17	1	34092404	1340
ENSMUSG00000112553	processed_pseudogene	Gm4556	ENSMUST00000217808	processed_pseudogene		10	1	128190529	355
ENSMUSG00000029312	protein_coding	Klhl8	ENSMUST00000147184	retained_intron		5	-1	103874369	642
ENSMUSG00000097107	lincRNA	Platr6	ENSMUST00000180731	lincRNA		10	-1	21844851	1818
ENSMUSG00000026737	protein_coding	Pip4k2a	ENSMUST00000006912	protein_coding	principal1	2	-1	18998126	3477
ENSMUSG00000105019	TEC	Gm43547	ENSMUST00000197729	TEC		5	-1	103880235	328
ENSMUSG00000024334	protein_coding	H2-Oa	ENSMUST00000174670	retained_intron		17	1	34092422	1231
ENSMUSG00000116423	processed_pseudogene	Gm7085	ENSMUST00000230636	processed_pseudogene		16	1	15452004	759
ENSMUSG00000103673	TEC	Gm37620	ENSMUST00000192910	TEC		7	1	72601989	501
ENSMUSG00000026737	protein_coding	Pip4k2a	ENSMUST00000148583	protein_coding		2	-1	18866120	317
ENSMUSG00000003809	protein_coding	Gcdh	ENSMUST00000003907	protein_coding	principal2	8	-1	84893917	2167
ENSMUSG00000100138	lincRNA	Gm28745	ENSMUST00000190069	lincRNA		7	-1	72637516	305
ENSMUSG00000026737	protein_coding	Pip4k2a	ENSMUST00000152981	protein_coding		2	-1	18906274	641
ENSMUSG00000028243	protein_coding	Ubxn2b	ENSMUST00000029907	protein_coding	principal1	4	1	6191098	6642
ENSMUSG00000062511	protein_coding	4930512M02Rik	ENSMUST00000081896	protein_coding	principal1	11	-1	11627824	715
ENSMUSG00000048833	protein_coding	Slc39a9	ENSMUST00000219706	protein_coding		12	1	80643883	5427
ENSMUSG00000018707	protein_coding	Dync1h1	ENSMUST00000018851	protein_coding	principal1	12	1	110601452	14342
ENSMUSG00000097471	antisense	5830432E09Rik	ENSMUST00000180693	antisense		7	-1	135652283	3569
ENSMUSG00000100407	lincRNA	Gm28472	ENSMUST00000190133	lincRNA		Y	1	84035192	1499
ENSMUSG00000001023	protein_coding	S100a5	ENSMUST00000107329	protein_coding	principal1	3	1	90608523	431
ENSMUSG00000048833	protein_coding	Slc39a9	ENSMUST00000219405	protein_coding		12	1	80644226	393
ENSMUSG00000099269	protein_coding	Calm5	ENSMUST00000183198	protein_coding		13	1	3854173	589
ENSMUSG00000100407	lincRNA	Gm28472	ENSMUST00000189995	lincRNA		Y	1	84035645	438
ENSMUSG00000057143	protein_coding	Trim12c	ENSMUST00000059037	protein_coding	principal1	7	-1	104353362	3740
ENSMUSG00000097471	antisense	5830432E09Rik	ENSMUST00000181940	antisense		7	-1	135652314	1494
ENSMUSG00000018707	protein_coding	Dync1h1	ENSMUST00000172218	retained_intron		12	1	110640524	851
ENSMUSG00000099269	protein_coding	Calm5	ENSMUST00000184271	protein_coding	principal1	13	1	3854268	423
ENSMUSG00000062511	protein_coding	4930512M02Rik	ENSMUST00000149910	processed_transcript		11	-1	11627835	732
ENSMUSG00000003809	protein_coding	Gcdh	ENSMUST00000139180	retained_intron		8	-1	84893285	819
ENSMUSG00000117627	processed_pseudogene	Tpi-rs10	ENSMUST00000234000	processed_pseudogene		18	-1	20549364	778
ENSMUSG00000001023	protein_coding	S100a5	ENSMUST00000001049	protein_coding	principal1	3	1	90609810	422
ENSMUSG00000097471	antisense	5830432E09Rik	ENSMUST00000210953	antisense		7	-1	135652283	2428
ENSMUSG00000018707	protein_coding	Dync1h1	ENSMUST00000167395	protein_coding		12	1	110654162	756
ENSMUSG00000003809	protein_coding	Gcdh	ENSMUST00000136462	retained_intron		8	-1	84892666	471
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000018971	protein_coding	alternative2	7	1	141949751	4049
ENSMUSG00000003809	protein_coding	Gcdh	ENSMUST00000128023	retained_intron		8	-1	84893475	542
ENSMUSG00000057143	protein_coding	Trim12c	ENSMUST00000130139	protein_coding	principal1	7	-1	104353338	2484
ENSMUSG00000048833	protein_coding	Slc39a9	ENSMUST00000085245	protein_coding	principal1	12	1	80644239	5201
ENSMUSG00000018707	protein_coding	Dync1h1	ENSMUST00000166185	retained_intron		12	1	110656405	522
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000172652	protein_coding	alternative2	7	1	141949846	2501
ENSMUSG00000048833	protein_coding	Slc39a9	ENSMUST00000218440	processed_transcript		12	1	80644240	969
ENSMUSG00000018707	protein_coding	Dync1h1	ENSMUST00000107660	retained_intron		12	1	110659092	577
ENSMUSG00000003809	protein_coding	Gcdh	ENSMUST00000142748	protein_coding		8	-1	84893921	408
ENSMUSG00000003809	protein_coding	Gcdh	ENSMUST00000109745	protein_coding	alternative2	8	-1	84893921	2114
ENSMUSG00000048833	protein_coding	Slc39a9	ENSMUST00000217889	protein_coding		12	1	80644510	2155
ENSMUSG00000048833	protein_coding	Slc39a9	ENSMUST00000217805	retained_intron		12	1	80666512	680
ENSMUSG00000018707	protein_coding	Dync1h1	ENSMUST00000171535	retained_intron		12	1	110660592	621
ENSMUSG00000018707	protein_coding	Dync1h1	ENSMUST00000170024	retained_intron		12	1	110660934	479
ENSMUSG00000048833	protein_coding	Slc39a9	ENSMUST00000219689	protein_coding		12	1	80666591	750
ENSMUSG00000018707	protein_coding	Dync1h1	ENSMUST00000166323	retained_intron		12	1	110663189	427
ENSMUSG00000095153	protein_coding	Gm21095	ENSMUST00000185776	protein_coding	principal1	Y	1	84097279	923
ENSMUSG00000048833	protein_coding	Slc39a9	ENSMUST00000217679	retained_intron		12	1	80671545	2674
ENSMUSG00000095153	protein_coding	Gm21095	ENSMUST00000177775	protein_coding		Y	1	84098711	498
ENSMUSG00000019826	protein_coding	Zbtb24	ENSMUST00000080771	protein_coding	principal1	10	1	41450383	2844
ENSMUSG00000113662	TEC	Gm35558	ENSMUST00000222675	TEC		12	-1	110601963	2219
ENSMUSG00000100946	unprocessed_pseudogene	Gm28473	ENSMUST00000187325	unprocessed_pseudogene		Y	-1	84184351	696
ENSMUSG00000112263	processed_pseudogene	Gm47874	ENSMUST00000217770	processed_pseudogene		12	-1	80649211	575
ENSMUSG00000090327	antisense	Gm17111	ENSMUST00000169981	antisense		12	-1	110665408	411
ENSMUSG00000112288	antisense	Gm47879	ENSMUST00000220154	antisense		12	1	80635992	503
ENSMUSG00000101851	processed_pseudogene	Gm28474	ENSMUST00000188501	processed_pseudogene		Y	-1	84220914	315
ENSMUSG00000081988	processed_pseudogene	Gm15746	ENSMUST00000120684	processed_pseudogene		16	-1	23198121	1027
ENSMUSG00000019826	protein_coding	Zbtb24	ENSMUST00000213797	protein_coding		10	1	41450427	2734
ENSMUSG00000038143	protein_coding	Stox2	ENSMUST00000110367	protein_coding		8	-1	47352348	3424
ENSMUSG00000001025	protein_coding	S100a6	ENSMUST00000001051	protein_coding	principal1	3	1	90612882	731
ENSMUSG00000084299	processed_pseudogene	Gm6630	ENSMUST00000119199	processed_pseudogene		16	1	23179556	454
ENSMUSG00000019826	protein_coding	Zbtb24	ENSMUST00000216656	protein_coding		10	1	41450435	2476
ENSMUSG00000050912	protein_coding	Tmem123	ENSMUST00000052865	protein_coding	principal1	9	1	7764041	2907
ENSMUSG00000026736	bidirectional_promoter_lncRNA	4930426L09Rik	ENSMUST00000238778	bidirectional_promoter_lncRNA		2	1	18998343	1462
ENSMUSG00000026736	bidirectional_promoter_lncRNA	4930426L09Rik	ENSMUST00000028069	bidirectional_promoter_lncRNA		2	1	18998343	1459
ENSMUSG00000042246	protein_coding	Tmc7	ENSMUST00000044195	protein_coding	principal1	7	-1	118584736	4546
ENSMUSG00000019826	protein_coding	Zbtb24	ENSMUST00000214159	retained_intron		10	1	41455211	623
ENSMUSG00000001025	protein_coding	S100a6	ENSMUST00000197189	retained_intron		3	1	90613154	338
ENSMUSG00000083281	processed_pseudogene	Gm13332	ENSMUST00000120451	processed_pseudogene		2	-1	19103098	1398
ENSMUSG00000078625	protein_coding	Gm12789	ENSMUST00000106914	protein_coding	principal1	4	1	101986626	883
ENSMUSG00000038143	protein_coding	Stox2	ENSMUST00000211737	protein_coding		8	-1	47289362	4573
ENSMUSG00000001025	protein_coding	S100a6	ENSMUST00000198128	protein_coding	principal1	3	1	90613305	464
ENSMUSG00000071204	transcribed_unprocessed_pseudogene	Gm10319	ENSMUST00000078431	processed_transcript		6	1	122136628	1355
ENSMUSG00000019826	protein_coding	Zbtb24	ENSMUST00000215881	retained_intron		10	1	41456131	719
ENSMUSG00000078625	protein_coding	Gm12789	ENSMUST00000151553	processed_transcript		4	1	101986860	656
ENSMUSG00000050912	protein_coding	Tmem123	ENSMUST00000136904	nonsense_mediated_decay		9	1	7764149	508
ENSMUSG00000078625	protein_coding	Gm12789	ENSMUST00000106915	protein_coding	principal1	4	1	101988116	495
ENSMUSG00000001025	protein_coding	S100a6	ENSMUST00000200289	nonsense_mediated_decay		3	1	90613760	783
ENSMUSG00000071204	transcribed_unprocessed_pseudogene	Gm10319	ENSMUST00000159439	transcribed_unprocessed_pseudogene		6	1	122136732	846
ENSMUSG00000100531	lincRNA	Gm28475	ENSMUST00000187645	lincRNA		Y	1	84257641	1497
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000187940	protein_coding	alternative2	6	-1	119196418	7507
ENSMUSG00000020698	protein_coding	Cct6b	ENSMUST00000021040	protein_coding	principal1	11	-1	82764306	1787
ENSMUSG00000038143	protein_coding	Stox2	ENSMUST00000210030	protein_coding		8	-1	47220235	2734
ENSMUSG00000100531	lincRNA	Gm28475	ENSMUST00000190299	lincRNA		Y	1	84258093	437
ENSMUSG00000082264	processed_pseudogene	Gm12799	ENSMUST00000118151	processed_pseudogene		4	-1	102049127	2560
ENSMUSG00000042246	protein_coding	Tmc7	ENSMUST00000153635	retained_intron		7	-1	118584686	2298
ENSMUSG00000020698	protein_coding	Cct6b	ENSMUST00000100722	protein_coding		11	-1	82764321	1871
ENSMUSG00000038143	protein_coding	Stox2	ENSMUST00000209337	nonsense_mediated_decay		8	-1	47220193	2681
ENSMUSG00000042246	protein_coding	Tmc7	ENSMUST00000145989	retained_intron		7	-1	118566627	570
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000065977	protein_coding	principal3	4	1	109000655	4311
ENSMUSG00000038143	protein_coding	Stox2	ENSMUST00000210153	protein_coding		8	-1	47242686	669
ENSMUSG00000042246	protein_coding	Tmc7	ENSMUST00000139693	processed_transcript		7	-1	118584709	389
ENSMUSG00000038143	protein_coding	Stox2	ENSMUST00000209941	retained_intron		8	-1	47242337	4617
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000102736	protein_coding	alternative2	4	1	109000655	4179
ENSMUSG00000114780	lincRNA	AI197445	ENSMUST00000225957	lincRNA		13	1	107469822	1990
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000106644	protein_coding	alternative2	4	1	109000770	3784
ENSMUSG00000050912	protein_coding	Tmem123	ENSMUST00000154371	nonsense_mediated_decay		9	1	7764165	2894
ENSMUSG00000114780	lincRNA	AI197445	ENSMUST00000224171	lincRNA		13	1	107469822	4748
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000114594	protein_coding	alternative2	2	-1	20968881	7351
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000125645	protein_coding		4	1	109016775	2190
ENSMUSG00000107230	antisense	Gm19265	ENSMUST00000201818	antisense		6	1	85961623	894
ENSMUSG00000020042	protein_coding	Btbd11	ENSMUST00000105307	protein_coding	principal3	10	1	85386814	5788
ENSMUSG00000038143	protein_coding	Stox2	ENSMUST00000181417	processed_transcript		8	-1	47446362	2310
ENSMUSG00000114780	lincRNA	AI197445	ENSMUST00000223617	lincRNA		13	1	107469822	242
ENSMUSG00000116950	processed_pseudogene	Gm18564	ENSMUST00000231919	processed_pseudogene		17	1	15547816	2048
ENSMUSG00000101777	processed_pseudogene	Gm9127	ENSMUST00000188041	processed_pseudogene		7	1	32059024	985
ENSMUSG00000083359	processed_pseudogene	Gm12656	ENSMUST00000118149	processed_pseudogene		4	1	94497032	577
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000155228	retained_intron		4	1	109024206	560
ENSMUSG00000020042	protein_coding	Btbd11	ENSMUST00000020231	protein_coding		10	1	85386827	2883
ENSMUSG00000028945	protein_coding	Rheb	ENSMUST00000030787	protein_coding	principal1	5	-1	24842624	1784
ENSMUSG00000020042	protein_coding	Btbd11	ENSMUST00000105306	protein_coding	alternative2	10	1	85598401	3945
ENSMUSG00000028945	protein_coding	Rheb	ENSMUST00000146310	retained_intron		5	-1	24813959	522
ENSMUSG00000106352	processed_transcript	5033403H07Rik	ENSMUST00000198248	lincRNA		5	-1	52994436	756
ENSMUSG00000003824	protein_coding	Syce2	ENSMUST00000136026	protein_coding	principal3	8	1	84872111	1686
ENSMUSG00000020042	protein_coding	Btbd11	ENSMUST00000135235	processed_transcript		10	1	85598411	560
ENSMUSG00000028945	protein_coding	Rheb	ENSMUST00000154523	retained_intron		5	-1	24842428	4046
ENSMUSG00000028945	protein_coding	Rheb	ENSMUST00000196039	retained_intron		5	-1	24842609	2606
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000150177	retained_intron		4	1	109032413	604
ENSMUSG00000020042	protein_coding	Btbd11	ENSMUST00000145323	retained_intron		10	1	85629515	3337
ENSMUSG00000106352	processed_transcript	5033403H07Rik	ENSMUST00000198580	lincRNA		5	-1	52992292	467
ENSMUSG00000003824	protein_coding	Syce2	ENSMUST00000003922	nonsense_mediated_decay		8	1	84872193	685
ENSMUSG00000106352	processed_transcript	5033403H07Rik	ENSMUST00000196858	retained_intron		5	-1	52992343	441
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000143604	retained_intron		4	1	109039757	966
ENSMUSG00000060470	protein_coding	Adgrg3	ENSMUST00000051259	protein_coding	principal1	8	1	95017692	2439
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000173194	protein_coding	principal3	2	-1	20967720	6920
ENSMUSG00000003824	protein_coding	Syce2	ENSMUST00000144466	retained_intron		8	1	84872438	463
ENSMUSG00000106538	lincRNA	Gm30301	ENSMUST00000199474	lincRNA		5	1	52982037	652
ENSMUSG00000101025	processed_pseudogene	Gm29262	ENSMUST00000190084	processed_pseudogene		7	-1	32073781	196
ENSMUSG00000060470	protein_coding	Adgrg3	ENSMUST00000212558	processed_transcript		8	1	95020405	424
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000141298	protein_coding	alternative2	2	-1	20968526	6339
ENSMUSG00000099396	processed_pseudogene	Gm29263	ENSMUST00000188718	processed_pseudogene		7	1	32073877	463
ENSMUSG00000060470	protein_coding	Adgrg3	ENSMUST00000211994	retained_intron		8	1	95020762	660
ENSMUSG00000020042	protein_coding	Btbd11	ENSMUST00000128338	processed_transcript		10	1	85639573	3246
ENSMUSG00000060470	protein_coding	Adgrg3	ENSMUST00000212951	retained_intron		8	1	95020794	2719
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000131542	retained_intron		2	-1	20853247	644
ENSMUSG00000020042	protein_coding	Btbd11	ENSMUST00000156123	retained_intron		10	1	85645203	2806
ENSMUSG00000003824	protein_coding	Syce2	ENSMUST00000170296	protein_coding	alternative2	8	1	84872111	929
ENSMUSG00000020042	protein_coding	Btbd11	ENSMUST00000145433	retained_intron		10	1	85654158	555
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000188522	protein_coding	alternative2	6	-1	119108573	7338
ENSMUSG00000087136	antisense	Gm15864	ENSMUST00000145950	antisense		6	-1	82052581	369
ENSMUSG00000052296	protein_coding	Ppp6r1	ENSMUST00000064099	protein_coding	principal1	7	-1	4659019	3862
ENSMUSG00000110437	TEC	Gm45876	ENSMUST00000212698	TEC		8	-1	126060524	2709
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000174405	nonsense_mediated_decay		7	1	141950007	2575
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000187474	protein_coding	alternative2	6	-1	119196387	6911
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000150784	processed_transcript		4	1	109040202	1958
ENSMUSG00000060470	protein_coding	Adgrg3	ENSMUST00000211974	retained_intron		8	1	95034302	3034
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000148444	processed_transcript		4	1	109046310	363
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000076183	protein_coding	principal1	4	-1	152318608	2466
ENSMUSG00000069045	protein_coding	Ddx3y	ENSMUST00000091190	protein_coding	principal1	Y	-1	1286629	4600
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000143015	retained_intron		4	1	109054949	534
ENSMUSG00000052296	protein_coding	Ppp6r1	ENSMUST00000206768	retained_intron		7	-1	4640163	673
ENSMUSG00000060470	protein_coding	Adgrg3	ENSMUST00000212570	nonsense_mediated_decay		8	1	95034720	1993
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000188078	protein_coding	alternative2	6	-1	119107975	6519
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000150796	retained_intron		4	1	109058934	164
ENSMUSG00000027455	protein_coding	Nsfl1c	ENSMUST00000089140	protein_coding	principal3	2	1	151494182	1486
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000189389	protein_coding	alternative2	6	-1	119107975	6603
ENSMUSG00000041301	protein_coding	Cftr	ENSMUST00000115405	nonsense_mediated_decay		6	1	18170687	6391
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000108688	retained_intron		4	-1	152309033	497
ENSMUSG00000081895	processed_pseudogene	Rpl17-ps10	ENSMUST00000119383	processed_pseudogene		7	-1	72649311	555
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000189520	protein_coding	alternative2	6	-1	119107975	6570
ENSMUSG00000053510	protein_coding	Nrd1	ENSMUST00000125063	retained_intron		4	1	109058991	781
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000170820	protein_coding		4	-1	152318458	1547
ENSMUSG00000100670	lincRNA	Gm28744	ENSMUST00000189939	lincRNA		7	-1	72668356	340
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000187317	protein_coding	alternative2	6	-1	119107975	6663
ENSMUSG00000052296	protein_coding	Ppp6r1	ENSMUST00000206391	retained_intron		7	-1	4658990	2731
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000185345	protein_coding	alternative2	6	-1	119107975	6579
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000105989	protein_coding	alternative2	7	1	141950083	2149
ENSMUSG00000041301	protein_coding	Cftr	ENSMUST00000140407	nonsense_mediated_decay		6	1	18170687	6410
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000174584	protein_coding		2	-1	20883229	4299
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000188865	protein_coding	alternative2	6	-1	119107975	6519
ENSMUSG00000069045	protein_coding	Ddx3y	ENSMUST00000188182	retained_intron		Y	-1	1265031	3072
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000108711	protein_coding	alternative2	11	-1	61579669	4287
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000187386	protein_coding		6	-1	119080007	6906
ENSMUSG00000052296	protein_coding	Ppp6r1	ENSMUST00000206966	nonsense_mediated_decay		7	-1	4643284	710
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000108712	protein_coding	alternative2	11	-1	61579669	4458
ENSMUSG00000035104	protein_coding	Eva1a	ENSMUST00000150976	protein_coding		6	1	82041043	515
ENSMUSG00000052296	protein_coding	Ppp6r1	ENSMUST00000206532	protein_coding		7	-1	4647405	764
ENSMUSG00000001988	protein_coding	Npas1	ENSMUST00000210748	protein_coding	principal1	7	-1	16475688	1959
ENSMUSG00000022518	protein_coding	4930562C15Rik	ENSMUST00000177042	processed_transcript		16	1	4835416	2724
ENSMUSG00000052296	protein_coding	Ppp6r1	ENSMUST00000205374	protein_coding		7	-1	4658981	773
ENSMUSG00000108477	TEC	Gm44878	ENSMUST00000205812	TEC		7	1	4658660	1295
ENSMUSG00000020150	protein_coding	Gamt	ENSMUST00000105363	protein_coding	principal1	10	-1	80261012	988
ENSMUSG00000069045	protein_coding	Ddx3y	ENSMUST00000188484	nonsense_mediated_decay		Y	-1	1286582	3031
ENSMUSG00000023341	polymorphic_pseudogene	Mx2	ENSMUST00000190447	polymorphic_pseudogene		16	1	97535308	2476
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000135837	retained_intron		4	-1	152313403	778
ENSMUSG00000024891	protein_coding	Slc29a2	ENSMUST00000236152	protein_coding	principal1	19	1	5023860	2619
ENSMUSG00000051977	protein_coding	Prdm9	ENSMUST00000167994	protein_coding	alternative2	17	-1	15563301	3438
ENSMUSG00000069045	protein_coding	Ddx3y	ENSMUST00000187596	retained_intron		Y	-1	1264459	664
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000127565	retained_intron		4	-1	152313348	643
ENSMUSG00000035104	protein_coding	Eva1a	ENSMUST00000042974	protein_coding	principal1	6	1	82041623	1773
ENSMUSG00000041895	protein_coding	Wipi1	ENSMUST00000103060	protein_coding	principal1	11	-1	109611432	2050
ENSMUSG00000099809	unprocessed_pseudogene	Gm18665	ENSMUST00000189783	unprocessed_pseudogene		Y	-1	1277582	270
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000127512	retained_intron		2	-1	20859888	884
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000142427	retained_intron		4	-1	152313400	488
ENSMUSG00000101059	processed_pseudogene	Gm4017	ENSMUST00000084813	processed_pseudogene		Y	-1	1268885	338
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000143491	retained_intron		2	-1	20854631	712
ENSMUSG00000041895	protein_coding	Wipi1	ENSMUST00000047186	protein_coding		11	-1	109611432	3338
ENSMUSG00000080961	processed_pseudogene	Gm11798	ENSMUST00000119150	processed_pseudogene		4	-1	6260965	421
ENSMUSG00000024891	protein_coding	Slc29a2	ENSMUST00000025826	protein_coding		19	1	5024071	2401
ENSMUSG00000023341	polymorphic_pseudogene	Mx2	ENSMUST00000188251	polymorphic_pseudogene		16	1	97536081	2421
ENSMUSG00000020150	protein_coding	Gamt	ENSMUST00000020359	protein_coding		10	-1	80260968	979
ENSMUSG00000035104	protein_coding	Eva1a	ENSMUST00000150691	processed_transcript		6	1	82041688	881
ENSMUSG00000001988	protein_coding	Npas1	ENSMUST00000211103	retained_intron		7	-1	16476780	2747
ENSMUSG00000022885	protein_coding	St6gal1	ENSMUST00000023601	protein_coding	principal1	16	1	23224740	4506
ENSMUSG00000041895	protein_coding	Wipi1	ENSMUST00000106689	protein_coding		11	-1	109611432	1220
ENSMUSG00000027455	protein_coding	Nsfl1c	ENSMUST00000153333	retained_intron		2	1	151494189	1631
ENSMUSG00000030002	protein_coding	Dusp11	ENSMUST00000032071	protein_coding	principal1	6	-1	85961667	6435
ENSMUSG00000001988	protein_coding	Npas1	ENSMUST00000211695	retained_intron		7	-1	16477728	661
ENSMUSG00000035104	protein_coding	Eva1a	ENSMUST00000149023	protein_coding		6	1	82052307	695
ENSMUSG00000051977	protein_coding	Prdm9	ENSMUST00000128267	retained_intron		17	-1	15555871	1082
ENSMUSG00000041895	protein_coding	Wipi1	ENSMUST00000153738	processed_transcript		11	-1	109611967	237
ENSMUSG00000023341	polymorphic_pseudogene	Mx2	ENSMUST00000190097	processed_transcript		16	1	97550387	649
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000136241	processed_transcript		2	-1	20855705	323
ENSMUSG00000051977	protein_coding	Prdm9	ENSMUST00000130297	retained_intron		17	-1	15555403	708
ENSMUSG00000024891	protein_coding	Slc29a2	ENSMUST00000237371	protein_coding		19	1	5024114	2362
ENSMUSG00000001988	protein_coding	Npas1	ENSMUST00000002053	protein_coding	principal1	7	-1	16476780	2091
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000112793	protein_coding		6	-1	119107975	6669
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000174825	processed_transcript		2	-1	20859796	569
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000197422	protein_coding	principal3	5	-1	87699630	1329
ENSMUSG00000023341	polymorphic_pseudogene	Mx2	ENSMUST00000191103	retained_intron		16	1	97558412	537
ENSMUSG00000117739	antisense	Gm36787	ENSMUST00000237981	antisense		19	-1	3719573	382
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000188106	protein_coding		6	-1	119107975	6462
ENSMUSG00000030002	protein_coding	Dusp11	ENSMUST00000201530	nonsense_mediated_decay		6	-1	85959285	677
ENSMUSG00000027455	protein_coding	Nsfl1c	ENSMUST00000125270	retained_intron		2	1	151494290	744
ENSMUSG00000024891	protein_coding	Slc29a2	ENSMUST00000235416	protein_coding		19	1	5024151	784
ENSMUSG00000034449	protein_coding	Dhrs11	ENSMUST00000047560	protein_coding	principal1	11	-1	84828964	1254
ENSMUSG00000020150	protein_coding	Gamt	ENSMUST00000148615	retained_intron		10	-1	80260918	950
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000173784	protein_coding		2	-1	20871399	1189
ENSMUSG00000084143	processed_pseudogene	Gm13400	ENSMUST00000117436	processed_pseudogene		2	-1	30924357	380
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000190285	protein_coding	principal4	6	-1	119196231	6585
ENSMUSG00000027455	protein_coding	Nsfl1c	ENSMUST00000028949	protein_coding	alternative1	2	1	151494293	1364
ENSMUSG00000020150	protein_coding	Gamt	ENSMUST00000144798	retained_intron		10	-1	80259289	371
ENSMUSG00000022885	protein_coding	St6gal1	ENSMUST00000152449	processed_transcript		16	1	23226021	476
ENSMUSG00000024891	protein_coding	Slc29a2	ENSMUST00000235933	retained_intron		19	1	5025914	440
ENSMUSG00000027455	protein_coding	Nsfl1c	ENSMUST00000103160	protein_coding		2	1	151494304	1369
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000154657	retained_intron		2	-1	20861102	799
ENSMUSG00000109010	lincRNA	Gm45027	ENSMUST00000207081	lincRNA		11	-1	77200819	78
ENSMUSG00000022885	protein_coding	St6gal1	ENSMUST00000128050	protein_coding		16	1	23269629	362
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000156142	processed_transcript		2	-1	20914694	697
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000075528	protein_coding	principal4	7	1	141950086	2160
ENSMUSG00000027455	protein_coding	Nsfl1c	ENSMUST00000133197	retained_intron		2	1	151494311	685
ENSMUSG00000024891	protein_coding	Slc29a2	ENSMUST00000237267	retained_intron		19	1	5026177	750
ENSMUSG00000030002	protein_coding	Dusp11	ENSMUST00000137527	retained_intron		6	-1	85950883	534
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000187849	processed_transcript		6	-1	118627946	715
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000197281	retained_intron		5	-1	87699409	2912
ENSMUSG00000034449	protein_coding	Dhrs11	ENSMUST00000151496	nonsense_mediated_decay		11	-1	84828994	942
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000140230	protein_coding		2	-1	20943419	489
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000189930	retained_intron		6	-1	118707147	4931
ENSMUSG00000027455	protein_coding	Nsfl1c	ENSMUST00000156182	processed_transcript		2	1	151502327	447
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000200627	retained_intron		5	-1	87696656	3945
ENSMUSG00000085228	sense_intronic	Gm14376	ENSMUST00000145297	sense_intronic		7	-1	144469993	297
ENSMUSG00000023341	polymorphic_pseudogene	Mx2	ENSMUST00000024112	protein_coding	principal1	16	1	97536083	2417
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000125783	protein_coding		2	-1	20968625	549
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000131394	processed_transcript		2	-1	20968484	165
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000189057	processed_transcript		6	-1	119196409	954
ENSMUSG00000105644	processed_pseudogene	Gm19739	ENSMUST00000195941	processed_pseudogene		3	-1	90651866	153
ENSMUSG00000022885	protein_coding	St6gal1	ENSMUST00000115335	protein_coding	principal1	16	1	23290470	2289
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000239204	protein_coding		6	-1	119196890	1427
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000173566	processed_transcript		2	-1	20968832	444
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000174499	protein_coding	alternative2	7	1	141950086	4223
ENSMUSG00000027455	protein_coding	Nsfl1c	ENSMUST00000146695	retained_intron		2	1	151502980	789
ENSMUSG00000051977	protein_coding	Prdm9	ENSMUST00000147532	protein_coding		17	-1	15564340	1447
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000173654	processed_transcript		2	-1	20968880	424
ENSMUSG00000051977	protein_coding	Prdm9	ENSMUST00000139911	retained_intron		17	-1	15564354	666
ENSMUSG00000027455	protein_coding	Nsfl1c	ENSMUST00000134081	retained_intron		2	1	151503737	899
ENSMUSG00000063767	protein_coding	S100a7a	ENSMUST00000212471	processed_transcript		3	1	90654017	137
ENSMUSG00000022885	protein_coding	St6gal1	ENSMUST00000178797	protein_coding	principal1	16	1	23226021	4177
ENSMUSG00000040907	protein_coding	Atp1a3	ENSMUST00000102858	protein_coding		7	-1	25005895	3895
ENSMUSG00000036591	protein_coding	Arhgap21	ENSMUST00000154230	protein_coding	alternative2	2	-1	20967721	6972
ENSMUSG00000027455	protein_coding	Nsfl1c	ENSMUST00000139229	retained_intron		2	1	151509100	930
ENSMUSG00000030002	protein_coding	Dusp11	ENSMUST00000156821	processed_transcript		6	-1	85953942	497
ENSMUSG00000051048	protein_coding	P4ha3	ENSMUST00000057023	protein_coding	principal1	7	1	100285520	2361
ENSMUSG00000051977	protein_coding	Prdm9	ENSMUST00000132675	processed_transcript		17	-1	15564322	474
ENSMUSG00000068463	antisense	B630019A10Rik	ENSMUST00000232204	antisense		16	1	23175280	1079
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000082370	protein_coding	alternative2	5	-1	87699425	1117
ENSMUSG00000101397	transcribed_unprocessed_pseudogene	Mug-ps1	ENSMUST00000190643	processed_transcript		6	1	122176015	655
ENSMUSG00000030002	protein_coding	Dusp11	ENSMUST00000139164	retained_intron		6	-1	85953826	620
ENSMUSG00000085206	sense_intronic	Gm13380	ENSMUST00000124322	sense_intronic		2	-1	20931389	718
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000196869	protein_coding	alternative2	5	-1	87699409	879
ENSMUSG00000051977	protein_coding	Prdm9	ENSMUST00000233295	protein_coding	principal2	17	-1	15563323	3460
ENSMUSG00000118194	processed_pseudogene	Gm19505	ENSMUST00000236073	processed_pseudogene		19	-1	6027865	328
ENSMUSG00000068463	antisense	B630019A10Rik	ENSMUST00000149488	antisense		16	1	23175288	2407
ENSMUSG00000094281	processed_pseudogene	Gm8034	ENSMUST00000178853	processed_pseudogene		19	-1	6044822	132
ENSMUSG00000115058	processed_pseudogene	Gm19883	ENSMUST00000227963	processed_pseudogene		15	1	28041009	481
ENSMUSG00000086173	processed_transcript	Kis2	ENSMUST00000143479	processed_transcript		X	-1	52744593	564
ENSMUSG00000063767	protein_coding	S100a7a	ENSMUST00000079286	protein_coding	principal1	3	1	90654302	1280
ENSMUSG00000068463	antisense	B630019A10Rik	ENSMUST00000232174	antisense		16	1	23192076	695
ENSMUSG00000086173	processed_transcript	Kis2	ENSMUST00000138156	processed_transcript		X	-1	52744593	878
ENSMUSG00000068463	antisense	B630019A10Rik	ENSMUST00000232062	antisense		16	1	23192150	5839
ENSMUSG00000086173	processed_transcript	Kis2	ENSMUST00000133214	processed_transcript		X	-1	52744593	1717
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000112825	protein_coding		6	-1	118757974	7577
ENSMUSG00000042379	protein_coding	Esm1	ENSMUST00000038144	protein_coding	principal1	13	1	113209659	2097
ENSMUSG00000086173	processed_transcript	Kis2	ENSMUST00000154488	processed_transcript		X	-1	52744960	1460
ENSMUSG00000030002	protein_coding	Dusp11	ENSMUST00000151394	processed_transcript		6	-1	85961667	877
ENSMUSG00000083621	processed_pseudogene	Gm14586	ENSMUST00000119571	processed_pseudogene		X	-1	52772749	408
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000219833	protein_coding		6	-1	118780324	7591
ENSMUSG00000045231	processed_transcript	BC106179	ENSMUST00000055369	lincRNA		16	-1	23225368	4128
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000220022	protein_coding		6	-1	118780324	7765
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000199624	protein_coding	principal3	5	-1	87699421	890
ENSMUSG00000030002	protein_coding	Dusp11	ENSMUST00000134793	processed_transcript		6	-1	85961607	719
ENSMUSG00000035372	protein_coding	1810055G02Rik	ENSMUST00000237320	protein_coding		19	1	3708293	772
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000219223	protein_coding		6	-1	118780324	7483
ENSMUSG00000094570	protein_coding	Gm20931	ENSMUST00000187293	protein_coding	principal1	Y	1	55213720	922
ENSMUSG00000030002	protein_coding	Dusp11	ENSMUST00000202379	retained_intron		6	-1	85961642	1320
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000198057	protein_coding	alternative2	5	-1	87699421	827
ENSMUSG00000022518	protein_coding	4930562C15Rik	ENSMUST00000100211	protein_coding	principal1	16	1	4835416	3824
ENSMUSG00000045231	processed_transcript	BC106179	ENSMUST00000231570	antisense		16	-1	23225484	2649
ENSMUSG00000051331	protein_coding	Cacna1c	ENSMUST00000219018	protein_coding		6	-1	118780324	7516
ENSMUSG00000094570	protein_coding	Gm20931	ENSMUST00000180249	protein_coding		Y	1	55215153	498
ENSMUSG00000117772	lincRNA	Gm50333	ENSMUST00000237628	lincRNA		17	1	34099929	397
ENSMUSG00000040907	protein_coding	Atp1a3	ENSMUST00000080882	protein_coding	principal2	7	-1	25005958	3621
ENSMUSG00000081843	processed_pseudogene	Gm7851	ENSMUST00000117574	processed_pseudogene		X	-1	52783016	323
ENSMUSG00000100488	unprocessed_pseudogene	Gm29559	ENSMUST00000189412	unprocessed_pseudogene		Y	-1	55300718	696
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000196163	protein_coding	alternative2	5	-1	87698092	722
ENSMUSG00000051048	protein_coding	P4ha3	ENSMUST00000139790	nonsense_mediated_decay		7	1	100285520	2403
ENSMUSG00000022518	protein_coding	4930562C15Rik	ENSMUST00000175836	processed_transcript		16	1	4841107	2530
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000130008	nonsense_mediated_decay		4	-1	152318481	1202
ENSMUSG00000063875	processed_pseudogene	Rps6-ps1	ENSMUST00000074205	processed_pseudogene		15	1	76337616	747
ENSMUSG00000100184	unprocessed_pseudogene	Gm29558	ENSMUST00000190134	unprocessed_pseudogene		Y	-1	55337352	375
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000196664	processed_transcript		5	-1	87696531	723
ENSMUSG00000051048	protein_coding	P4ha3	ENSMUST00000148620	retained_intron		7	1	100285542	1342
ENSMUSG00000034206	protein_coding	Polq	ENSMUST00000071452	protein_coding		16	1	37011786	7290
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000197687	retained_intron		5	-1	87699421	1613
ENSMUSG00000063157	protein_coding	Csn2	ENSMUST00000199716	retained_intron		5	-1	87699421	256
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000143968	retained_intron		4	-1	152315965	676
ENSMUSG00000072726	protein_coding	Gm5797	ENSMUST00000100886	protein_coding	principal1	14	-1	7332395	997
ENSMUSG00000051048	protein_coding	P4ha3	ENSMUST00000138465	protein_coding		7	1	100293810	1884
ENSMUSG00000051048	protein_coding	P4ha3	ENSMUST00000208565	processed_transcript		7	1	100301581	1215
ENSMUSG00000035372	protein_coding	1810055G02Rik	ENSMUST00000039048	protein_coding	principal1	19	1	3708333	1882
ENSMUSG00000040907	protein_coding	Atp1a3	ENSMUST00000196684	protein_coding	alternative1	7	-1	25005943	3642
ENSMUSG00000097941	processed_pseudogene	Gm8984	ENSMUST00000183005	processed_pseudogene		5	-1	16509183	1019
ENSMUSG00000035372	protein_coding	1810055G02Rik	ENSMUST00000235295	protein_coding	principal1	19	1	3708347	1643
ENSMUSG00000042385	protein_coding	Gzmk	ENSMUST00000122399	protein_coding		13	-1	113225908	1304
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000172967	nonsense_mediated_decay		7	1	141981537	1986
ENSMUSG00000073207	protein_coding	Ccdc160	ENSMUST00000101588	protein_coding	principal1	X	1	52791200	1536
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000134269	retained_intron		4	-1	152318993	3579
ENSMUSG00000034206	protein_coding	Polq	ENSMUST00000182946	nonsense_mediated_decay		16	1	37011786	8628
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000173924	nonsense_mediated_decay		7	1	141984849	1655
ENSMUSG00000050737	protein_coding	Ptges	ENSMUST00000102852	protein_coding	principal1	2	-1	30903297	3647
ENSMUSG00000091676	protein_coding	Gm8374	ENSMUST00000163826	protein_coding	principal1	14	-1	7365134	672
ENSMUSG00000056054	protein_coding	S100a8	ENSMUST00000069927	protein_coding	principal1	3	1	90668978	486
ENSMUSG00000035372	protein_coding	1810055G02Rik	ENSMUST00000237955	protein_coding	principal1	19	1	3708371	2193
ENSMUSG00000030095	protein_coding	Tmem43	ENSMUST00000032183	protein_coding	principal1	6	1	91473703	2903
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000145311	retained_intron		4	-1	152318619	1448
ENSMUSG00000082887	processed_pseudogene	Gm14607	ENSMUST00000119119	processed_pseudogene		X	1	52878243	491
ENSMUSG00000022518	protein_coding	4930562C15Rik	ENSMUST00000176982	nonsense_mediated_decay		16	1	4858254	1288
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000123133	retained_intron		4	-1	152318625	3194
ENSMUSG00000035372	protein_coding	1810055G02Rik	ENSMUST00000235837	protein_coding	principal1	19	1	3708411	1875
ENSMUSG00000056054	protein_coding	S100a8	ENSMUST00000198156	retained_intron		3	1	90669311	498
ENSMUSG00000101397	transcribed_unprocessed_pseudogene	Mug-ps1	ENSMUST00000186891	transcribed_unprocessed_pseudogene		6	1	122176114	4386
ENSMUSG00000083683	processed_pseudogene	Gm6539	ENSMUST00000119157	processed_pseudogene		X	1	52878792	1064
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000173705	nonsense_mediated_decay		7	1	141984889	2294
ENSMUSG00000050737	protein_coding	Ptges	ENSMUST00000056046	processed_transcript		2	-1	30901788	703
ENSMUSG00000058498	protein_coding	Rnf207	ENSMUST00000146496	retained_intron		4	-1	152316328	625
ENSMUSG00000030095	protein_coding	Tmem43	ENSMUST00000153179	retained_intron		6	1	91473727	561
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000174309	nonsense_mediated_decay		7	1	141985710	1603
ENSMUSG00000035372	protein_coding	1810055G02Rik	ENSMUST00000235763	processed_transcript		19	1	3708413	437
ENSMUSG00000022518	protein_coding	4930562C15Rik	ENSMUST00000171105	protein_coding		16	1	4858254	1299
ENSMUSG00000071591	lincRNA	Gm10339	ENSMUST00000181509	lincRNA		14	-1	7412375	1691
ENSMUSG00000040907	protein_coding	Atp1a3	ENSMUST00000146595	retained_intron		7	-1	25005907	3539
ENSMUSG00000022518	protein_coding	4930562C15Rik	ENSMUST00000176394	nonsense_mediated_decay		16	1	4858254	1207
ENSMUSG00000118231	processed_pseudogene	Gm2141	ENSMUST00000237464	processed_pseudogene		19	-1	3731012	540
ENSMUSG00000030095	protein_coding	Tmem43	ENSMUST00000205954	processed_transcript		6	1	91473751	376
ENSMUSG00000081684	processed_pseudogene	Rps2-ps13	ENSMUST00000117295	processed_pseudogene		X	1	52898588	882
ENSMUSG00000040907	protein_coding	Atp1a3	ENSMUST00000125444	retained_intron		7	-1	25005957	560
ENSMUSG00000022518	protein_coding	4930562C15Rik	ENSMUST00000175762	nonsense_mediated_decay		16	1	4861573	582
ENSMUSG00000118096	processed_pseudogene	Gm50374	ENSMUST00000235687	processed_pseudogene		19	-1	3732340	247
ENSMUSG00000071591	lincRNA	Gm10339	ENSMUST00000225409	lincRNA		14	-1	7381919	1671
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000174237	protein_coding		7	1	141993154	698
ENSMUSG00000050737	protein_coding	Ptges	ENSMUST00000132244	processed_transcript		2	-1	30929863	543
ENSMUSG00000071591	lincRNA	Gm10339	ENSMUST00000096151	lincRNA		14	-1	7404092	583
ENSMUSG00000109885	processed_pseudogene	Gm6842	ENSMUST00000211361	processed_pseudogene		7	-1	7534964	390
ENSMUSG00000022518	protein_coding	4930562C15Rik	ENSMUST00000180939	retained_intron		16	1	4864323	674
ENSMUSG00000117773	lincRNA	Gm50375	ENSMUST00000235154	lincRNA		19	-1	3742537	692
ENSMUSG00000050737	protein_coding	Ptges	ENSMUST00000126588	processed_transcript		2	-1	30897469	446
ENSMUSG00000042385	protein_coding	Gzmk	ENSMUST00000038212	protein_coding	principal1	13	-1	113180897	1028
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000173313	protein_coding		7	1	141993210	1230
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000001063	protein_coding	principal3	11	-1	61579685	4243
ENSMUSG00000101397	transcribed_unprocessed_pseudogene	Mug-ps1	ENSMUST00000189975	processed_transcript		6	1	122229060	3293
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000173285	processed_transcript		7	1	141997470	661
ENSMUSG00000099826	unprocessed_pseudogene	Scgb2b10	ENSMUST00000191403	unprocessed_pseudogene		7	-1	32093938	318
ENSMUSG00000100685	antisense	Gm28610	ENSMUST00000187716	antisense		1	1	151875419	406
ENSMUSG00000115545	lincRNA	Gm48908	ENSMUST00000227437	lincRNA		2	1	50380400	631
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000108713	protein_coding	alternative2	11	-1	61579685	4207
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000173330	processed_transcript		7	1	141997498	759
ENSMUSG00000082483	processed_pseudogene	Gm13486	ENSMUST00000119910	processed_pseudogene		2	1	50409332	282
ENSMUSG00000030095	protein_coding	Tmem43	ENSMUST00000140246	retained_intron		6	1	91473759	860
ENSMUSG00000041301	protein_coding	Cftr	ENSMUST00000045706	protein_coding	principal2	6	1	18170687	6303
ENSMUSG00000053678	protein_coding	Defb40	ENSMUST00000066258	protein_coding	principal1	8	-1	18978256	389
ENSMUSG00000042385	protein_coding	Gzmk	ENSMUST00000140324	nonsense_mediated_decay		13	-1	113180921	889
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000148956	protein_coding		11	-1	61546373	821
ENSMUSG00000099581	protein_coding	Scgb1b10	ENSMUST00000187257	protein_coding	principal1	7	1	32100853	417
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000173941	protein_coding		7	1	141998661	2497
ENSMUSG00000030095	protein_coding	Tmem43	ENSMUST00000144246	processed_transcript		6	1	91476600	465
ENSMUSG00000085862	lincRNA	Gm13483	ENSMUST00000138528	lincRNA		2	1	50296810	1160
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000153984	protein_coding		11	-1	61544313	445
ENSMUSG00000096691	protein_coding	Vmn2r33	ENSMUST00000165921	protein_coding	principal1	7	-1	7566786	2586
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000210065	processed_transcript		7	1	142001441	2694
ENSMUSG00000101327	processed_pseudogene	Rpl23a-ps10	ENSMUST00000185511	processed_pseudogene		7	1	32136677	462
ENSMUSG00000034206	protein_coding	Polq	ENSMUST00000054034	protein_coding	principal1	16	1	37011786	8552
ENSMUSG00000041301	protein_coding	Cftr	ENSMUST00000129452	protein_coding		6	1	18170771	2835
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000151545	retained_intron		11	-1	61546542	726
ENSMUSG00000053046	protein_coding	Brsk2	ENSMUST00000078200	protein_coding	alternative2	7	1	141949751	2363
ENSMUSG00000041301	protein_coding	Cftr	ENSMUST00000115406	protein_coding	alternative2	6	1	18170824	4341
ENSMUSG00000025494	protein_coding	Sigirr	ENSMUST00000210167	protein_coding	alternative2	7	-1	141100524	1897
ENSMUSG00000108224	processed_pseudogene	Gm31861	ENSMUST00000204563	processed_pseudogene		6	1	82242174	672
ENSMUSG00000085862	lincRNA	Gm13483	ENSMUST00000123699	lincRNA		2	1	50296865	664
ENSMUSG00000092314	unprocessed_pseudogene	Gm3563	ENSMUST00000172963	unprocessed_pseudogene		7	-1	7506878	1628
ENSMUSG00000085862	lincRNA	Gm13483	ENSMUST00000228816	lincRNA		2	1	50296905	410
ENSMUSG00000099673	unprocessed_pseudogene	Scgb2b30	ENSMUST00000187013	unprocessed_pseudogene		7	-1	32148031	336
ENSMUSG00000053695	protein_coding	Defb37	ENSMUST00000066282	protein_coding	principal1	8	-1	18991055	352
ENSMUSG00000034206	protein_coding	Polq	ENSMUST00000182163	retained_intron		16	1	37011815	1206
ENSMUSG00000107809	TEC	Gm44209	ENSMUST00000204556	TEC		6	-1	82322983	4153
ENSMUSG00000041301	protein_coding	Cftr	ENSMUST00000140532	retained_intron		6	1	18255224	838
ENSMUSG00000034206	protein_coding	Polq	ENSMUST00000182622	retained_intron		16	1	37040436	2949
ENSMUSG00000099409	unprocessed_pseudogene	Gm28751	ENSMUST00000189287	unprocessed_pseudogene		Y	-1	48944869	696
ENSMUSG00000034206	protein_coding	Polq	ENSMUST00000182717	retained_intron		16	1	37085915	2202
ENSMUSG00000038384	protein_coding	Setd1b	ENSMUST00000100731	retained_intron		5	1	123142193	3365
ENSMUSG00000039662	protein_coding	Icmt	ENSMUST00000048892	protein_coding	principal1	4	1	152297227	4919
ENSMUSG00000067872	protein_coding	Ccdc87	ENSMUST00000088653	protein_coding	principal1	19	1	4839366	3163
ENSMUSG00000103469	TEC	Gm9910	ENSMUST00000195385	TEC		11	1	105943704	1550
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000147501	protein_coding		11	-1	61579658	606
ENSMUSG00000106083	unprocessed_pseudogene	Gm42452	ENSMUST00000199749	unprocessed_pseudogene		5	1	15798001	617
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000146455	protein_coding		11	-1	61579658	490
ENSMUSG00000096743	protein_coding	Vmn2r32	ENSMUST00000094866	protein_coding	principal1	7	-1	7480018	4477
ENSMUSG00000099522	unprocessed_pseudogene	Gm28752	ENSMUST00000188340	unprocessed_pseudogene		Y	-1	48981482	315
ENSMUSG00000025838	protein_coding	Pramel6	ENSMUST00000026956	protein_coding	principal1	2	1	87508458	1540
ENSMUSG00000109290	processed_pseudogene	Phgdh-ps1	ENSMUST00000207540	processed_pseudogene		7	-1	83711719	754
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000141335	processed_transcript		11	-1	61579662	332
ENSMUSG00000105515	TEC	Gm42454	ENSMUST00000196805	TEC		5	1	15805564	1181
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000137525	processed_transcript		11	-1	61579670	440
ENSMUSG00000025494	protein_coding	Sigirr	ENSMUST00000097958	protein_coding	principal2	7	-1	141100546	1990
ENSMUSG00000011306	protein_coding	Sugp1	ENSMUST00000011450	protein_coding	principal1	8	1	70042813	2681
ENSMUSG00000090849	unprocessed_pseudogene	Vmn2r-ps36	ENSMUST00000172589	unprocessed_pseudogene		7	-1	7441299	2562
ENSMUSG00000055917	protein_coding	Zfp277	ENSMUST00000069692	protein_coding	alternative2	12	-1	40445774	2438
ENSMUSG00000025494	protein_coding	Sigirr	ENSMUST00000209294	protein_coding	principal2	7	-1	141100542	1612
ENSMUSG00000025494	protein_coding	Sigirr	ENSMUST00000210978	retained_intron		7	-1	141100572	1723
ENSMUSG00000039662	protein_coding	Icmt	ENSMUST00000151372	nonsense_mediated_decay		4	1	152297304	4950
ENSMUSG00000025494	protein_coding	Sigirr	ENSMUST00000209887	nonsense_mediated_decay		7	-1	141093750	850
ENSMUSG00000028240	protein_coding	Cyp7a1	ENSMUST00000029905	protein_coding	principal1	4	-1	6275631	4172
ENSMUSG00000032666	protein_coding	1700025G04Rik	ENSMUST00000187603	nonsense_mediated_decay		1	-1	152089970	2548
ENSMUSG00000025838	protein_coding	Pramel6	ENSMUST00000138504	processed_transcript		2	1	87506565	427
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000179936	protein_coding	alternative2	11	-1	61579687	4452
ENSMUSG00000025494	protein_coding	Sigirr	ENSMUST00000210941	retained_intron		7	-1	141094891	816
ENSMUSG00000096373	protein_coding	Vmn2r31	ENSMUST00000075108	protein_coding	principal1	7	-1	7399703	8396
ENSMUSG00000011306	protein_coding	Sugp1	ENSMUST00000211808	retained_intron		8	1	70043034	2963
ENSMUSG00000039662	protein_coding	Icmt	ENSMUST00000125617	processed_transcript		4	1	152297656	845
ENSMUSG00000055917	protein_coding	Zfp277	ENSMUST00000069637	protein_coding	principal3	12	-1	40445902	2188
ENSMUSG00000028240	protein_coding	Cyp7a1	ENSMUST00000147346	processed_transcript		4	-1	6275633	228
ENSMUSG00000001036	protein_coding	Epn2	ENSMUST00000178202	protein_coding	principal3	11	-1	61579687	4317
ENSMUSG00000025838	protein_coding	Pramel6	ENSMUST00000148582	processed_transcript		2	1	87506565	656
ENSMUSG00000011306	protein_coding	Sugp1	ENSMUST00000213035	retained_intron		8	1	70043049	2239
ENSMUSG00000039662	protein_coding	Icmt	ENSMUST00000134242	processed_transcript		4	1	152305387	379
ENSMUSG00000018654	protein_coding	Ikzf1	ENSMUST00000126058	protein_coding		11	1	11685003	446
ENSMUSG00000025494	protein_coding	Sigirr	ENSMUST00000209199	protein_coding		7	-1	141096688	543
ENSMUSG00000025838	protein_coding	Pramel6	ENSMUST00000132216	processed_transcript		2	1	87506583	644
ENSMUSG00000055917	protein_coding	Zfp277	ENSMUST00000221604	retained_intron		12	-1	40322841	3080
ENSMUSG00000025494	protein_coding	Sigirr	ENSMUST00000209352	protein_coding		7	-1	141096739	363
ENSMUSG00000055917	protein_coding	Zfp277	ENSMUST00000222394	retained_intron		12	-1	40328978	4504
ENSMUSG00000106791	lincRNA	4930553P18Rik	ENSMUST00000201164	lincRNA		6	1	86004380	1659
ENSMUSG00000028578	protein_coding	Caap1	ENSMUST00000030313	protein_coding	principal1	4	-1	94556796	2107
ENSMUSG00000055917	protein_coding	Zfp277	ENSMUST00000221847	retained_intron		12	-1	40362884	2382
ENSMUSG00000025838	protein_coding	Pramel6	ENSMUST00000150746	processed_transcript		2	1	87507425	653
ENSMUSG00000032666	protein_coding	1700025G04Rik	ENSMUST00000044581	protein_coding	principal1	1	-1	152090125	9559
ENSMUSG00000025838	protein_coding	Pramel6	ENSMUST00000111572	protein_coding	principal1	2	1	87507425	1781
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000130186	protein_coding		2	1	11777876	627
ENSMUSG00000028578	protein_coding	Caap1	ENSMUST00000153294	processed_transcript		4	-1	94556766	2075
ENSMUSG00000098013	processed_pseudogene	Gm9135	ENSMUST00000182963	processed_pseudogene		7	1	32171714	990
ENSMUSG00000101824	processed_pseudogene	Gm28256	ENSMUST00000188953	processed_pseudogene		7	-1	32202397	139
ENSMUSG00000032666	protein_coding	1700025G04Rik	ENSMUST00000128433	retained_intron		1	-1	151921227	772
ENSMUSG00000101504	processed_pseudogene	Gm28257	ENSMUST00000185244	processed_pseudogene		7	1	32202493	463
ENSMUSG00000074166	protein_coding	AW146154	ENSMUST00000098509	protein_coding	principal1	7	-1	41499890	3411
ENSMUSG00000040629	protein_coding	Mael	ENSMUST00000194057	protein_coding		1	-1	166238747	1691
ENSMUSG00000032666	protein_coding	1700025G04Rik	ENSMUST00000121533	nonsense_mediated_decay		1	-1	152055292	835
ENSMUSG00000074166	protein_coding	AW146154	ENSMUST00000205572	retained_intron		7	-1	41482566	1135
ENSMUSG00000002266	protein_coding	Zim1	ENSMUST00000002336	protein_coding	principal1	7	-1	6696450	7693
ENSMUSG00000084927	protein_coding	Gm5724	ENSMUST00000148411	protein_coding	principal1	6	-1	141773810	2449
ENSMUSG00000074166	protein_coding	AW146154	ENSMUST00000205995	processed_transcript		7	-1	41499408	1337
ENSMUSG00000031681	protein_coding	Smad1	ENSMUST00000066091	protein_coding	principal1	8	-1	79399518	3099
ENSMUSG00000020873	protein_coding	Slc35b1	ENSMUST00000021243	protein_coding	principal1	11	1	95384692	1523
ENSMUSG00000030043	protein_coding	Tacr1	ENSMUST00000205041	retained_intron		6	1	82402334	2647
ENSMUSG00000031681	protein_coding	Smad1	ENSMUST00000109885	protein_coding		8	-1	79399518	3775
ENSMUSG00000002266	protein_coding	Zim1	ENSMUST00000122432	protein_coding	principal1	7	-1	6696429	3060
ENSMUSG00000074166	protein_coding	AW146154	ENSMUST00000205634	processed_transcript		7	-1	41499427	637
ENSMUSG00000002266	protein_coding	Zim1	ENSMUST00000213399	processed_transcript		7	-1	6688672	408
ENSMUSG00000031681	protein_coding	Smad1	ENSMUST00000210678	processed_transcript		8	-1	79350051	699
ENSMUSG00000002266	protein_coding	Zim1	ENSMUST00000203908	protein_coding	principal1	7	-1	6688672	1740
ENSMUSG00000020873	protein_coding	Slc35b1	ENSMUST00000146556	protein_coding		11	1	95384757	606
ENSMUSG00000001558	protein_coding	Klhl10	ENSMUST00000001599	protein_coding	principal1	11	1	100441917	2017
ENSMUSG00000040629	protein_coding	Mael	ENSMUST00000038782	protein_coding	principal1	1	-1	166238744	1546
ENSMUSG00000031681	protein_coding	Smad1	ENSMUST00000215983	retained_intron		8	-1	79356678	670
ENSMUSG00000092592	protein_coding	Gm20449	ENSMUST00000094532	nonsense_mediated_decay	principal1	7	-1	41499417	3847
ENSMUSG00000031681	protein_coding	Smad1	ENSMUST00000066081	processed_transcript		8	-1	79399518	1746
ENSMUSG00000108312	processed_pseudogene	Gm44521	ENSMUST00000206469	processed_pseudogene		7	-1	41467866	217
ENSMUSG00000043391	protein_coding	2510009E07Rik	ENSMUST00000053336	protein_coding	principal1	16	-1	21694665	5164
ENSMUSG00000100938	lincRNA	Gm28726	ENSMUST00000190994	lincRNA		Y	1	49018254	1500
ENSMUSG00000001558	protein_coding	Klhl10	ENSMUST00000107395	protein_coding		11	1	100441927	932
ENSMUSG00000024431	protein_coding	Nr3c1	ENSMUST00000115567	protein_coding	principal2	18	-1	39490674	6436
ENSMUSG00000083034	unprocessed_pseudogene	Olfr334-ps1	ENSMUST00000121252	unprocessed_pseudogene		2	1	36285023	892
ENSMUSG00000100938	lincRNA	Gm28726	ENSMUST00000191027	lincRNA		Y	1	49018707	434
ENSMUSG00000091864	lincRNA	Gm17102	ENSMUST00000170929	lincRNA		7	1	41393698	906
ENSMUSG00000057367	protein_coding	Birc2	ENSMUST00000190341	protein_coding	principal1	9	-1	7837057	3331
ENSMUSG00000056071	protein_coding	S100a9	ENSMUST00000069960	protein_coding	principal1	3	-1	90695711	512
ENSMUSG00000087433	antisense	Gm14167	ENSMUST00000148705	antisense		2	-1	151542348	433
ENSMUSG00000043391	protein_coding	2510009E07Rik	ENSMUST00000232164	protein_coding		16	-1	21693231	508
ENSMUSG00000024431	protein_coding	Nr3c1	ENSMUST00000025300	protein_coding	principal2	18	-1	39489846	4989
ENSMUSG00000057367	protein_coding	Birc2	ENSMUST00000191248	processed_transcript		9	-1	7836805	707
ENSMUSG00000113163	polymorphic_pseudogene	Olfr335-ps	ENSMUST00000223545	polymorphic_pseudogene	principal1	2	1	36301541	939
ENSMUSG00000057367	protein_coding	Birc2	ENSMUST00000189935	retained_intron		9	-1	7837063	1316
ENSMUSG00000083500	processed_pseudogene	Gm15470	ENSMUST00000119135	processed_pseudogene		7	1	41490351	1371
ENSMUSG00000105916	processed_pseudogene	Gm42453	ENSMUST00000200477	processed_pseudogene		5	1	15870247	409
ENSMUSG00000109945	lincRNA	Gm45601	ENSMUST00000211483	lincRNA		8	1	79404148	6753
ENSMUSG00000043391	protein_coding	2510009E07Rik	ENSMUST00000231592	protein_coding		16	-1	21694629	1135
ENSMUSG00000109851	processed_pseudogene	Gm39288	ENSMUST00000210554	processed_pseudogene		8	-1	79490186	446
ENSMUSG00000024431	protein_coding	Nr3c1	ENSMUST00000097592	protein_coding	alternative2	18	-1	39487232	2382
ENSMUSG00000057367	protein_coding	Birc2	ENSMUST00000074246	protein_coding	principal1	9	-1	7835255	3130
ENSMUSG00000043391	protein_coding	2510009E07Rik	ENSMUST00000232634	nonsense_mediated_decay		16	-1	21694580	1695
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000056108	protein_coding	principal1	2	1	11778491	1618
ENSMUSG00000057367	protein_coding	Birc2	ENSMUST00000054878	protein_coding		9	-1	7837064	378
ENSMUSG00000109591	processed_pseudogene	Gm8077	ENSMUST00000209221	processed_pseudogene		8	-1	79498178	1024
ENSMUSG00000030043	protein_coding	Tacr1	ENSMUST00000032122	protein_coding	principal1	6	1	82402475	5021
ENSMUSG00000024431	protein_coding	Nr3c1	ENSMUST00000152853	protein_coding		18	-1	39489888	1891
ENSMUSG00000109774	lincRNA	Gm45602	ENSMUST00000211703	lincRNA		8	1	79491142	1036
ENSMUSG00000056071	protein_coding	S100a9	ENSMUST00000117167	protein_coding	principal1	3	-1	90695721	519
ENSMUSG00000109774	lincRNA	Gm45602	ENSMUST00000211686	lincRNA		8	1	79497442	785
ENSMUSG00000105185	lincRNA	4930519H02Rik	ENSMUST00000198907	lincRNA		5	-1	15883766	968
ENSMUSG00000073702	protein_coding	Rpl31	ENSMUST00000086535	protein_coding	principal1	1	1	39367842	1049
ENSMUSG00000024431	protein_coding	Nr3c1	ENSMUST00000124115	protein_coding		18	-1	39491301	632
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000167734	retained_intron		12	1	88722876	4086
ENSMUSG00000105185	lincRNA	4930519H02Rik	ENSMUST00000198603	lincRNA		5	-1	15883829	618
ENSMUSG00000082583	unprocessed_pseudogene	Olfr336-ps1	ENSMUST00000120897	unprocessed_pseudogene		2	1	36323324	940
ENSMUSG00000030043	protein_coding	Tacr1	ENSMUST00000203775	protein_coding	principal1	6	1	82402787	4933
ENSMUSG00000097975	processed_pseudogene	Gm8079	ENSMUST00000182695	processed_pseudogene		8	-1	79550748	975
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000110138	retained_intron		12	1	88722888	2278
ENSMUSG00000066537	protein_coding	Vmn2r57	ENSMUST00000233793	protein_coding		7	-1	41448696	6558
ENSMUSG00000027748	protein_coding	Trpc4	ENSMUST00000198444	processed_transcript		3	1	54156035	1380
ENSMUSG00000073702	protein_coding	Rpl31	ENSMUST00000194746	protein_coding		1	1	39367878	703
ENSMUSG00000024431	protein_coding	Nr3c1	ENSMUST00000131885	protein_coding		18	-1	39489283	504
ENSMUSG00000080936	transcribed_unprocessed_pseudogene	Olfr337-ps1	ENSMUST00000213375	processed_transcript		2	1	36336611	526
ENSMUSG00000046027	protein_coding	Stard5	ENSMUST00000075418	protein_coding	principal1	7	1	83631959	2483
ENSMUSG00000080936	transcribed_unprocessed_pseudogene	Olfr337-ps1	ENSMUST00000120380	transcribed_unprocessed_pseudogene		2	1	36336628	456
ENSMUSG00000099729	protein_coding	Scgb2b11	ENSMUST00000188293	protein_coding	principal1	7	-1	32211145	523
ENSMUSG00000066537	protein_coding	Vmn2r57	ENSMUST00000233555	protein_coding	alternative2	7	-1	41448696	6371
ENSMUSG00000066537	protein_coding	Vmn2r57	ENSMUST00000165029	protein_coding	principal2	7	-1	41448696	6434
ENSMUSG00000024431	protein_coding	Nr3c1	ENSMUST00000237944	protein_coding		18	-1	39519421	377
ENSMUSG00000046027	protein_coding	Stard5	ENSMUST00000146469	retained_intron		7	1	83632000	482
ENSMUSG00000038384	protein_coding	Setd1b	ENSMUST00000174836	protein_coding	alternative2	5	1	123142193	7515
ENSMUSG00000020873	protein_coding	Slc35b1	ENSMUST00000131193	nonsense_mediated_decay		11	1	95384891	1299
ENSMUSG00000024431	protein_coding	Nr3c1	ENSMUST00000150483	protein_coding		18	-1	39491299	300
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000175980	retained_intron		8	1	84686307	1014
ENSMUSG00000101638	protein_coding	Scgb1b11	ENSMUST00000186031	protein_coding	principal1	7	1	32222840	418
ENSMUSG00000046027	protein_coding	Stard5	ENSMUST00000117410	protein_coding		7	1	83632000	2832
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000176914	processed_transcript		8	1	84686319	502
ENSMUSG00000073988	protein_coding	Ttpa	ENSMUST00000125799	protein_coding		4	1	20007938	436
ENSMUSG00000024431	protein_coding	Nr3c1	ENSMUST00000115571	protein_coding	principal2	18	-1	39487245	6327
ENSMUSG00000068950	protein_coding	Olfr338	ENSMUST00000072114	protein_coding	principal1	2	1	36373519	5780
ENSMUSG00000073702	protein_coding	Rpl31	ENSMUST00000178079	protein_coding	principal1	1	1	39367929	487
ENSMUSG00000020873	protein_coding	Slc35b1	ENSMUST00000141284	retained_intron		11	1	95384906	719
ENSMUSG00000068950	protein_coding	Olfr338	ENSMUST00000217511	protein_coding	principal1	2	1	36373578	5724
ENSMUSG00000020873	protein_coding	Slc35b1	ENSMUST00000143090	retained_intron		11	1	95389985	529
ENSMUSG00000046027	protein_coding	Stard5	ENSMUST00000150174	retained_intron		7	1	83632016	897
ENSMUSG00000068950	protein_coding	Olfr338	ENSMUST00000091006	protein_coding	principal1	2	1	36376778	921
ENSMUSG00000115773	lincRNA	Gm31458	ENSMUST00000228807	lincRNA		15	-1	28118452	1308
ENSMUSG00000046027	protein_coding	Stard5	ENSMUST00000130723	processed_transcript		7	1	83632553	369
ENSMUSG00000115722	processed_pseudogene	Gm8472	ENSMUST00000228415	processed_pseudogene		15	-1	28123621	363
ENSMUSG00000083101	processed_pseudogene	Gm13430	ENSMUST00000121366	processed_pseudogene		2	1	36389132	288
ENSMUSG00000108825	TEC	Gm45838	ENSMUST00000207355	TEC		7	1	83633371	2447
ENSMUSG00000053790	protein_coding	Defb38	ENSMUST00000066416	protein_coding	principal1	8	-1	19026566	286
ENSMUSG00000115839	lincRNA	Gm49233	ENSMUST00000227452	lincRNA		15	-1	28155462	362
ENSMUSG00000038384	protein_coding	Setd1b	ENSMUST00000163030	protein_coding	principal2	5	1	123142193	8857
ENSMUSG00000115806	TEC	Gm49234	ENSMUST00000228611	TEC		15	-1	28192122	1229
ENSMUSG00000038384	protein_coding	Setd1b	ENSMUST00000173221	retained_intron		5	1	123162709	2375
ENSMUSG00000038384	protein_coding	Setd1b	ENSMUST00000162839	protein_coding		5	1	123163381	648
ENSMUSG00000038384	protein_coding	Setd1b	ENSMUST00000056053	protein_coding	principal2	5	1	123142957	7362
ENSMUSG00000073702	protein_coding	Rpl31	ENSMUST00000179954	protein_coding	principal1	1	1	39367929	630
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000052332	protein_coding	principal2	1	1	60409619	5768
ENSMUSG00000073702	protein_coding	Rpl31	ENSMUST00000195123	protein_coding		1	1	39368149	356
ENSMUSG00000073702	protein_coding	Rpl31	ENSMUST00000191855	retained_intron		1	1	39369850	468
ENSMUSG00000090618	processed_pseudogene	Gm8379	ENSMUST00000165448	processed_pseudogene		14	1	7418908	1192
ENSMUSG00000102607	TEC	Gm37265	ENSMUST00000191698	TEC		1	-1	39419932	885
ENSMUSG00000057060	protein_coding	Slc35f3	ENSMUST00000238518	protein_coding	alternative1	8	1	126138995	2912
ENSMUSG00000111323	sense_intronic	Gm48129	ENSMUST00000213244	sense_intronic		9	-1	40342103	383
ENSMUSG00000057060	protein_coding	Slc35f3	ENSMUST00000238386	protein_coding		8	1	126139382	2531
ENSMUSG00000090585	lincRNA	4933406F09Rik	ENSMUST00000180508	lincRNA		14	1	7412460	680
ENSMUSG00000090585	lincRNA	4933406F09Rik	ENSMUST00000163303	lincRNA		14	1	7412473	1293
ENSMUSG00000073988	protein_coding	Ttpa	ENSMUST00000121491	protein_coding		4	1	20008007	2862
ENSMUSG00000090585	lincRNA	4933406F09Rik	ENSMUST00000181409	lincRNA		14	1	7412480	2078
ENSMUSG00000090585	lincRNA	4933406F09Rik	ENSMUST00000180633	lincRNA		14	1	7412480	677
ENSMUSG00000057060	protein_coding	Slc35f3	ENSMUST00000108759	protein_coding	principal2	8	1	126298558	2309
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000188594	protein_coding		1	1	60409695	1658
ENSMUSG00000091325	unprocessed_pseudogene	Gm3760	ENSMUST00000167475	unprocessed_pseudogene		14	-1	7506148	804
ENSMUSG00000081762	processed_pseudogene	Gm13738	ENSMUST00000122437	processed_pseudogene		2	-1	87517500	469
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000188618	protein_coding		1	1	60409695	4723
ENSMUSG00000083267	unprocessed_pseudogene	Olfr1127-ps1	ENSMUST00000119555	unprocessed_pseudogene		2	-1	87524373	892
ENSMUSG00000091227	protein_coding	Gm3755	ENSMUST00000169555	protein_coding	principal1	14	-1	7450917	1462
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000189980	protein_coding		1	1	60409734	4115
ENSMUSG00000086799	processed_transcript	4930502E09Rik	ENSMUST00000126016	processed_transcript		11	1	84829178	755
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000191493	retained_intron		1	1	60409781	3005
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000189082	protein_coding		1	1	60409795	463
ENSMUSG00000069044	protein_coding	Usp9y	ENSMUST00000091188	protein_coding	principal1	Y	-1	1459782	8094
ENSMUSG00000091617	protein_coding	Gm3752	ENSMUST00000164366	protein_coding	principal1	14	-1	7483762	1817
ENSMUSG00000029188	protein_coding	Slc34a2	ENSMUST00000170523	protein_coding		5	1	53038081	717
ENSMUSG00000091617	protein_coding	Gm3752	ENSMUST00000167833	protein_coding		14	-1	7473073	450
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000187709	protein_coding	alternative1	1	1	60409803	1671
ENSMUSG00000018654	protein_coding	Ikzf1	ENSMUST00000065433	protein_coding	alternative1	11	1	11685925	4697
ENSMUSG00000021112	protein_coding	Mpp5	ENSMUST00000219197	nonsense_mediated_decay		12	1	78748907	5283
ENSMUSG00000073988	protein_coding	Ttpa	ENSMUST00000117632	protein_coding		4	1	20008357	3123
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000189649	retained_intron		1	1	60409808	362
ENSMUSG00000021112	protein_coding	Mpp5	ENSMUST00000219667	protein_coding		12	1	78748926	413
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000185788	protein_coding		1	1	60437083	1926
ENSMUSG00000085295	antisense	4930430E12Rik	ENSMUST00000139214	antisense		4	-1	6357530	901
ENSMUSG00000085295	antisense	4930430E12Rik	ENSMUST00000145448	antisense		4	-1	6357530	641
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000187400	protein_coding		1	1	60437207	763
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000186097	protein_coding		1	1	60437212	1356
ENSMUSG00000026782	protein_coding	Abi2	ENSMUST00000190158	protein_coding		1	1	60438942	1403
ENSMUSG00000051671	protein_coding	Coa6	ENSMUST00000059093	protein_coding	principal1	8	1	126422515	747
ENSMUSG00000109315	lincRNA	Gm45037	ENSMUST00000207475	lincRNA		7	1	93361678	673
ENSMUSG00000073988	protein_coding	Ttpa	ENSMUST00000098244	protein_coding	principal1	4	1	20008428	3053
ENSMUSG00000018654	protein_coding	Ikzf1	ENSMUST00000018798	protein_coding	alternative1	11	1	11686445	1542
ENSMUSG00000051671	protein_coding	Coa6	ENSMUST00000211868	protein_coding	principal1	8	1	126422528	564
ENSMUSG00000101821	unprocessed_pseudogene	Gm21308	ENSMUST00000186571	unprocessed_pseudogene		Y	-1	49318753	696
ENSMUSG00000018654	protein_coding	Ikzf1	ENSMUST00000048122	protein_coding		11	1	11686229	911
ENSMUSG00000101950	unprocessed_pseudogene	Gm29267	ENSMUST00000191020	unprocessed_pseudogene		Y	-1	49401435	378
ENSMUSG00000099441	unprocessed_pseudogene	Gm29268	ENSMUST00000188669	unprocessed_pseudogene		Y	-1	49431001	615
ENSMUSG00000018654	protein_coding	Ikzf1	ENSMUST00000141436	protein_coding		11	1	11685003	242
ENSMUSG00000105310	processed_pseudogene	Gm42451	ENSMUST00000197410	processed_pseudogene		5	-1	15900487	244
ENSMUSG00000052749	protein_coding	Trim30b	ENSMUST00000145982	retained_intron		7	-1	104369884	3514
ENSMUSG00000100411	unprocessed_pseudogene	Gm29269	ENSMUST00000190087	unprocessed_pseudogene		Y	-1	49467982	696
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000150213	retained_intron		2	1	11778524	3643
ENSMUSG00000017344	protein_coding	Vtn	ENSMUST00000128479	retained_intron		11	1	78499091	1171
ENSMUSG00000096936	lincRNA	Gm3510	ENSMUST00000180447	lincRNA		5	-1	15933406	1455
ENSMUSG00000052749	protein_coding	Trim30b	ENSMUST00000209729	retained_intron		7	-1	104358646	2771
ENSMUSG00000019590	protein_coding	Cyb561	ENSMUST00000019734	protein_coding	principal1	11	-1	105944412	2741
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000125024	retained_intron		2	1	11778527	3688
ENSMUSG00000018654	protein_coding	Ikzf1	ENSMUST00000076700	protein_coding	principal4	11	1	11686213	5163
ENSMUSG00000100970	lincRNA	Gm29270	ENSMUST00000188071	lincRNA		Y	-1	49477161	2167
ENSMUSG00000019590	protein_coding	Cyb561	ENSMUST00000183493	protein_coding		11	-1	105937798	886
ENSMUSG00000057541	protein_coding	Pus7	ENSMUST00000119946	protein_coding	principal3	5	-1	23783711	3407
ENSMUSG00000052749	protein_coding	Trim30b	ENSMUST00000106831	protein_coding	alternative2	7	-1	104369866	4287
ENSMUSG00000073145	antisense	Gm12000	ENSMUST00000132007	antisense		11	-1	11696439	629
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000156067	nonsense_mediated_decay		2	1	11778564	1485
ENSMUSG00000052749	protein_coding	Trim30b	ENSMUST00000155961	retained_intron		7	-1	104358643	582
ENSMUSG00000019590	protein_coding	Cyb561	ENSMUST00000184086	protein_coding		11	-1	105944139	1130
ENSMUSG00000031078	protein_coding	Cttn	ENSMUST00000033407	protein_coding	alternative2	7	-1	144470745	2913
ENSMUSG00000057541	protein_coding	Pus7	ENSMUST00000148618	protein_coding	alternative2	5	-1	23783553	3266
ENSMUSG00000019590	protein_coding	Cyb561	ENSMUST00000146607	processed_transcript		11	-1	105936177	505
ENSMUSG00000052749	protein_coding	Trim30b	ENSMUST00000164410	protein_coding	principal5	7	-1	104369782	3042
ENSMUSG00000085652	processed_transcript	Gm11999	ENSMUST00000145789	processed_transcript		11	-1	11685400	813
ENSMUSG00000019235	protein_coding	Rps6kl1	ENSMUST00000221972	protein_coding	principal1	12	-1	85151264	2881
ENSMUSG00000052749	protein_coding	Trim30b	ENSMUST00000171830	protein_coding		7	-1	104358646	2771
ENSMUSG00000057541	protein_coding	Pus7	ENSMUST00000131992	protein_coding	principal3	5	-1	23779558	3645
ENSMUSG00000019590	protein_coding	Cyb561	ENSMUST00000143251	protein_coding		11	-1	105953336	816
ENSMUSG00000029188	protein_coding	Slc34a2	ENSMUST00000094787	protein_coding	principal1	5	1	53049352	4176
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000150320	retained_intron		2	1	11778572	1919
ENSMUSG00000019590	protein_coding	Cyb561	ENSMUST00000184269	protein_coding		11	-1	105944429	771
ENSMUSG00000107603	TEC	Gm43921	ENSMUST00000204296	TEC		6	1	4506087	1792
ENSMUSG00000019235	protein_coding	Rps6kl1	ENSMUST00000222232	retained_intron		12	-1	85139989	2034
ENSMUSG00000094237	protein_coding	AF067063	ENSMUST00000195234	protein_coding	principal1	13	-1	119830216	885
ENSMUSG00000021112	protein_coding	Mpp5	ENSMUST00000082024	protein_coding	principal1	12	1	78748992	5470
ENSMUSG00000094237	protein_coding	AF067063	ENSMUST00000179455	protein_coding	principal1	13	-1	119828678	590
ENSMUSG00000026246	protein_coding	Alppl2	ENSMUST00000027455	protein_coding	principal1	1	-1	87089911	2092
ENSMUSG00000057541	protein_coding	Pus7	ENSMUST00000129848	processed_transcript		5	-1	23750112	773
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000190626	protein_coding		12	1	88722986	5583
ENSMUSG00000019235	protein_coding	Rps6kl1	ENSMUST00000019379	protein_coding		12	-1	85151236	2304
ENSMUSG00000021112	protein_coding	Mpp5	ENSMUST00000218726	retained_intron		12	1	78829475	424
ENSMUSG00000019590	protein_coding	Cyb561	ENSMUST00000150563	protein_coding		11	-1	105944487	967
ENSMUSG00000029188	protein_coding	Slc34a2	ENSMUST00000147243	retained_intron		5	1	53049353	1778
ENSMUSG00000021112	protein_coding	Mpp5	ENSMUST00000219180	retained_intron		12	1	78834463	3619
ENSMUSG00000019235	protein_coding	Rps6kl1	ENSMUST00000223399	retained_intron		12	-1	85151250	1118
ENSMUSG00000031078	protein_coding	Cttn	ENSMUST00000103079	protein_coding	principal3	7	-1	144471009	3286
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000133664	nonsense_mediated_decay		2	1	11779885	753
ENSMUSG00000057541	protein_coding	Pus7	ENSMUST00000131404	nonsense_mediated_decay		5	-1	23762413	888
ENSMUSG00000026246	protein_coding	Alppl2	ENSMUST00000188310	protein_coding	principal1	1	-1	87089928	2016
ENSMUSG00000085142	lincRNA	Gm12702	ENSMUST00000123258	lincRNA		4	1	100052520	612
ENSMUSG00000090642	antisense	Gm17182	ENSMUST00000163795	antisense		5	-1	53049188	860
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000194100	retained_intron		2	1	11783289	1296
ENSMUSG00000094464	protein_coding	Olfr339	ENSMUST00000216645	protein_coding	principal1	2	1	36418947	4867
ENSMUSG00000031078	protein_coding	Cttn	ENSMUST00000134131	retained_intron		7	-1	144438328	598
ENSMUSG00000026246	protein_coding	Alppl2	ENSMUST00000190082	retained_intron		1	-1	87089805	644
ENSMUSG00000057541	protein_coding	Pus7	ENSMUST00000147922	processed_transcript		5	-1	23762450	721
ENSMUSG00000094464	protein_coding	Olfr339	ENSMUST00000071437	protein_coding	principal1	2	1	36421400	930
ENSMUSG00000097982	protein_coding	Scgb2b12	ENSMUST00000183195	protein_coding	principal1	7	-1	32327245	511
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000145547	retained_intron		2	1	11783309	1001
ENSMUSG00000101625	lincRNA	Gm29371	ENSMUST00000186823	lincRNA		1	1	87080171	885
ENSMUSG00000031078	protein_coding	Cttn	ENSMUST00000157079	retained_intron		7	-1	144449774	600
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000114566	protein_coding		6	-1	48444036	543
ENSMUSG00000057541	protein_coding	Pus7	ENSMUST00000148921	processed_transcript		5	-1	23754576	1114
ENSMUSG00000031078	protein_coding	Cttn	ENSMUST00000126018	processed_transcript		7	-1	144445905	336
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000148498	retained_intron		2	1	11784205	895
ENSMUSG00000095920	processed_pseudogene	Gm6686	ENSMUST00000178455	processed_pseudogene		17	-1	15566421	258
ENSMUSG00000101520	protein_coding	Scgb1b12	ENSMUST00000188355	protein_coding	principal1	7	1	32334182	417
ENSMUSG00000030889	protein_coding	Vwa3a	ENSMUST00000168600	nonsense_mediated_decay		7	1	120739318	3589
ENSMUSG00000094266	protein_coding	Olfr340	ENSMUST00000072854	protein_coding	principal1	2	1	36452587	939
ENSMUSG00000057541	protein_coding	Pus7	ENSMUST00000151449	nonsense_mediated_decay		5	-1	23778378	750
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000101443	protein_coding		6	-1	48445464	599
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000128774	nonsense_mediated_decay		2	1	11784293	893
ENSMUSG00000057541	protein_coding	Pus7	ENSMUST00000195909	retained_intron		5	-1	23775668	3118
ENSMUSG00000031078	protein_coding	Cttn	ENSMUST00000150607	processed_transcript		7	-1	144452587	362
ENSMUSG00000109284	lincRNA	B230311B06Rik	ENSMUST00000208859	lincRNA		7	1	118592328	510
ENSMUSG00000099483	unprocessed_pseudogene	Gm28476	ENSMUST00000190540	unprocessed_pseudogene		Y	-1	84366250	696
ENSMUSG00000047909	protein_coding	Ankrd16	ENSMUST00000142622	retained_intron		2	1	11786158	534
ENSMUSG00000031078	protein_coding	Cttn	ENSMUST00000148778	processed_transcript		7	-1	144460773	462
ENSMUSG00000075387	protein_coding	Olfr341	ENSMUST00000213300	protein_coding	principal1	2	-1	36482468	6634
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000114564	protein_coding		6	-1	48445567	626
ENSMUSG00000101742	unprocessed_pseudogene	Gm21380	ENSMUST00000189621	unprocessed_pseudogene		Y	-1	84440964	696
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000114563	protein_coding		6	-1	48445373	463
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000167103	protein_coding		12	1	88723109	6944
ENSMUSG00000100024	unprocessed_pseudogene	Gm21782	ENSMUST00000188517	unprocessed_pseudogene		Y	-1	84489780	678
ENSMUSG00000075387	protein_coding	Olfr341	ENSMUST00000100154	protein_coding	principal1	2	-1	36480128	942
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000163944	processed_transcript		12	1	88725009	673
ENSMUSG00000086733	lincRNA	Gm11685	ENSMUST00000141559	lincRNA		11	1	109616320	1332
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000190030	processed_transcript		12	1	88725681	528
ENSMUSG00000094660	protein_coding	Gm21394	ENSMUST00000189463	protein_coding	principal1	Y	-1	84564907	1223
ENSMUSG00000109284	lincRNA	B230311B06Rik	ENSMUST00000209113	lincRNA		7	1	118592343	517
ENSMUSG00000094660	protein_coding	Gm21394	ENSMUST00000179523	protein_coding	principal1	Y	-1	84563394	684
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000163134	protein_coding	principal1	12	1	88794504	7922
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000114559	protein_coding		6	-1	48445084	3163
ENSMUSG00000109284	lincRNA	B230311B06Rik	ENSMUST00000207610	lincRNA		7	1	118592446	687
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000164072	processed_transcript		12	1	88795439	646
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000025749	protein_coding	principal1	19	-1	4163354	4586
ENSMUSG00000117634	antisense	Gm50069	ENSMUST00000235010	antisense		18	-1	11657784	2365
ENSMUSG00000109284	lincRNA	B230311B06Rik	ENSMUST00000207147	lincRNA		7	1	118592516	589
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000170533	processed_transcript		12	1	88953390	525
ENSMUSG00000116940	processed_pseudogene	Gm7450	ENSMUST00000231841	processed_pseudogene		17	-1	15577151	1153
ENSMUSG00000116550	processed_pseudogene	Gm3507	ENSMUST00000232156	processed_pseudogene		17	1	15597928	521
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000057634	protein_coding		12	1	88953399	4634
ENSMUSG00000064030	protein_coding	Pym1	ENSMUST00000163377	protein_coding	principal4	10	1	128747889	1158
ENSMUSG00000116924	lincRNA	4933401D09Rik	ENSMUST00000231675	lincRNA		17	1	15631763	898
ENSMUSG00000116924	lincRNA	4933401D09Rik	ENSMUST00000231822	lincRNA		17	1	15631788	1327
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000238943	protein_coding		12	1	89812408	3418
ENSMUSG00000017344	protein_coding	Vtn	ENSMUST00000017488	protein_coding	principal1	11	1	78499120	1744
ENSMUSG00000090290	protein_coding	Tarbp1	ENSMUST00000170518	protein_coding	principal1	8	-1	126475065	6383
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000110133	protein_coding		12	1	89812483	2699
ENSMUSG00000017344	protein_coding	Vtn	ENSMUST00000146997	retained_intron		11	1	78499172	906
ENSMUSG00000029223	protein_coding	Uchl1	ENSMUST00000031131	protein_coding	principal1	5	1	66676091	1177
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000110130	protein_coding		12	1	89812483	3654
ENSMUSG00000059923	protein_coding	Grb2	ENSMUST00000106497	protein_coding	principal1	11	-1	115699534	2683
ENSMUSG00000073987	protein_coding	Ggh	ENSMUST00000098242	protein_coding	principal1	4	1	20042052	1965
ENSMUSG00000082908	processed_pseudogene	Gm13736	ENSMUST00000119272	processed_pseudogene		2	1	87526145	253
ENSMUSG00000017344	protein_coding	Vtn	ENSMUST00000153628	retained_intron		11	1	78500606	678
ENSMUSG00000064030	protein_coding	Pym1	ENSMUST00000065210	protein_coding	alternative2	10	1	128748455	1156
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000114560	protein_coding	principal1	6	-1	48445090	3266
ENSMUSG00000109195	processed_pseudogene	Gm45038	ENSMUST00000207537	processed_pseudogene		7	1	93523060	3838
ENSMUSG00000066392	protein_coding	Nrxn3	ENSMUST00000167887	protein_coding		12	1	89193106	3303
ENSMUSG00000103039	TEC	Gm37123	ENSMUST00000192994	TEC		3	1	32454587	1171
ENSMUSG00000110459	lincRNA	Gm31717	ENSMUST00000213044	lincRNA		8	-1	117677209	668
ENSMUSG00000103136	TEC	Gm37980	ENSMUST00000194420	TEC		12	-1	89255361	1910
ENSMUSG00000029223	protein_coding	Uchl1	ENSMUST00000177194	retained_intron		5	1	66676242	491
ENSMUSG00000109077	processed_pseudogene	Gm8285	ENSMUST00000208293	processed_pseudogene		7	-1	93565695	759
ENSMUSG00000113055	TEC	Gm48700	ENSMUST00000221188	TEC		12	1	90068099	4275
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000114561	protein_coding	principal1	6	-1	48445825	3619
ENSMUSG00000114153	TEC	Gm48692	ENSMUST00000222398	TEC		12	1	89655723	2379
ENSMUSG00000001741	protein_coding	Il16	ENSMUST00000001792	protein_coding	principal1	7	-1	83735523	5260
ENSMUSG00000064030	protein_coding	Pym1	ENSMUST00000218218	protein_coding		10	1	128748528	1143
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000114558	protein_coding		6	-1	48445442	3115
ENSMUSG00000029223	protein_coding	Uchl1	ENSMUST00000176015	retained_intron		5	1	66676892	980
ENSMUSG00000046442	protein_coding	Ppm1e	ENSMUST00000055438	protein_coding	principal1	11	-1	87359023	6344
ENSMUSG00000050114	protein_coding	Prdx6b	ENSMUST00000057072	protein_coding	principal1	2	1	80292472	2885
ENSMUSG00000029223	protein_coding	Uchl1	ENSMUST00000202339	retained_intron		5	1	66683684	228
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000114556	protein_coding		6	-1	48445693	2287
ENSMUSG00000045055	processed_pseudogene	Rpsa-ps2	ENSMUST00000059546	processed_pseudogene		10	-1	128777250	880
ENSMUSG00000001741	protein_coding	Il16	ENSMUST00000145610	protein_coding		7	-1	83655495	3183
ENSMUSG00000086330	processed_transcript	1700007J10Rik	ENSMUST00000139530	processed_transcript		11	-1	59732772	679
ENSMUSG00000103304	unprocessed_pseudogene	Gm5979	ENSMUST00000193850	unprocessed_pseudogene		3	1	88474584	571
ENSMUSG00000087601	antisense	Uchl1os	ENSMUST00000152002	antisense		5	-1	66676498	1685
ENSMUSG00000040296	protein_coding	Ddx58	ENSMUST00000037907	protein_coding	principal1	4	-1	40239828	3874
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000141449	nonsense_mediated_decay		6	-1	48445358	434
ENSMUSG00000001741	protein_coding	Il16	ENSMUST00000151047	retained_intron		7	-1	83655325	2605
ENSMUSG00000086330	processed_transcript	1700007J10Rik	ENSMUST00000153431	processed_transcript		11	-1	59740154	1111
ENSMUSG00000046442	protein_coding	Ppm1e	ENSMUST00000155154	processed_transcript		11	-1	87358637	866
ENSMUSG00000080976	processed_pseudogene	Gm11490	ENSMUST00000118128	processed_pseudogene		11	1	87304673	272
ENSMUSG00000109226	TEC	Gm45039	ENSMUST00000209181	TEC		7	-1	93608316	3477
ENSMUSG00000087601	antisense	Uchl1os	ENSMUST00000177319	antisense		5	-1	66676033	505
ENSMUSG00000068551	protein_coding	Zfp467	ENSMUST00000140198	retained_intron		6	-1	48445494	357
ENSMUSG00000109440	scRNA	Bc1-ps1	ENSMUST00000208471	scRNA		7	-1	93660555	318
ENSMUSG00000039568	protein_coding	Ubald1	ENSMUST00000037843	protein_coding	principal1	16	-1	4880315	1851
ENSMUSG00000118493	processed_pseudogene	AC107736.1	ENSMUST00000238896	processed_pseudogene		7	-1	93847854	1011
ENSMUSG00000001741	protein_coding	Il16	ENSMUST00000153560	nonsense_mediated_decay		7	-1	83745726	2625
ENSMUSG00000039568	protein_coding	Ubald1	ENSMUST00000143873	retained_intron		16	-1	4879805	4749
ENSMUSG00000005417	protein_coding	Mprip	ENSMUST00000138234	processed_transcript		11	1	59661305	392
ENSMUSG00000086947	antisense	4930522O17Rik	ENSMUST00000155178	antisense		4	1	53246196	447
ENSMUSG00000095514	protein_coding	D13Ertd608e	ENSMUST00000195797	protein_coding	principal5	13	1	119845348	704
ENSMUSG00000095514	protein_coding	D13Ertd608e	ENSMUST00000179131	protein_coding	alternative2	13	1	119836006	417
ENSMUSG00000022853	protein_coding	Ehhadh	ENSMUST00000023559	protein_coding	principal1	16	-1	21787807	2981
ENSMUSG00000059923	protein_coding	Grb2	ENSMUST00000021090	protein_coding	principal1	11	-1	115708597	2709
ENSMUSG00000035601	protein_coding	Trmt10b	ENSMUST00000044673	protein_coding	principal2	4	1	45297127	2064
ENSMUSG00000110151	lincRNA	Gm38416	ENSMUST00000209648	lincRNA		8	1	117681622	3565
ENSMUSG00000040296	protein_coding	Ddx58	ENSMUST00000149539	processed_transcript		4	-1	40239825	1607
ENSMUSG00000110151	lincRNA	Gm38416	ENSMUST00000212223	lincRNA		8	1	117681850	1828
ENSMUSG00000001741	protein_coding	Il16	ENSMUST00000131916	protein_coding		7	-1	83732407	532
ENSMUSG00000059923	protein_coding	Grb2	ENSMUST00000106499	protein_coding		11	-1	115699307	2333
ENSMUSG00000078616	protein_coding	Trim30c	ENSMUST00000106828	protein_coding	principal1	7	-1	104400837	1716
ENSMUSG00000035601	protein_coding	Trmt10b	ENSMUST00000144781	protein_coding		4	1	45297155	643
ENSMUSG00000086712	lincRNA	AI427809	ENSMUST00000123127	lincRNA		4	-1	53270232	2033
ENSMUSG00000001741	protein_coding	Il16	ENSMUST00000156553	protein_coding		7	-1	83739937	348
ENSMUSG00000079677	protein_coding	Fdx2	ENSMUST00000010348	protein_coding	principal1	9	-1	21073544	812
ENSMUSG00000059923	protein_coding	Grb2	ENSMUST00000106495	protein_coding		11	-1	115708576	2041
ENSMUSG00000086712	lincRNA	AI427809	ENSMUST00000186737	lincRNA		4	-1	53265492	1024
ENSMUSG00000107121	lincRNA	1110006O24Rik	ENSMUST00000201728	lincRNA		5	-1	115631816	768
ENSMUSG00000103877	processed_pseudogene	Gm21358	ENSMUST00000191645	processed_pseudogene		13	-1	119873075	1659
ENSMUSG00000059923	protein_coding	Grb2	ENSMUST00000135065	protein_coding		11	-1	115699928	369
ENSMUSG00000086712	lincRNA	AI427809	ENSMUST00000123044	lincRNA		4	-1	53263831	595
ENSMUSG00000061520	protein_coding	Olfr153	ENSMUST00000217113	protein_coding	principal1	2	1	87531796	1258
ENSMUSG00000085080	antisense	2310044K18Rik	ENSMUST00000125131	antisense		7	1	83659575	618
ENSMUSG00000086712	lincRNA	AI427809	ENSMUST00000098075	lincRNA		4	-1	53262547	655
ENSMUSG00000040296	protein_coding	Ddx58	ENSMUST00000139583	processed_transcript		4	-1	40239755	1641
ENSMUSG00000084277	processed_pseudogene	Gm11702	ENSMUST00000118223	processed_pseudogene		11	-1	115657559	69
ENSMUSG00000110114	processed_pseudogene	Gm45471	ENSMUST00000211270	processed_pseudogene		7	-1	104406525	281
ENSMUSG00000035601	protein_coding	Trmt10b	ENSMUST00000141659	processed_transcript		4	1	45300414	963
ENSMUSG00000104162	processed_pseudogene	Gm37619	ENSMUST00000193219	processed_pseudogene		13	1	119878292	724
ENSMUSG00000040296	protein_coding	Ddx58	ENSMUST00000127026	processed_transcript		4	-1	40239722	1250
ENSMUSG00000035601	protein_coding	Trmt10b	ENSMUST00000142785	processed_transcript		4	1	45300434	459
ENSMUSG00000108532	lincRNA	Gm32647	ENSMUST00000206116	lincRNA		7	1	94042691	3288
ENSMUSG00000096284	protein_coding	Tcstv1	ENSMUST00000190512	protein_coding	principal1	13	-1	119894785	875
ENSMUSG00000108532	lincRNA	Gm32647	ENSMUST00000206579	lincRNA		7	1	94042752	3147
ENSMUSG00000079677	protein_coding	Fdx2	ENSMUST00000217150	retained_intron		9	-1	21073614	951
ENSMUSG00000035601	protein_coding	Trmt10b	ENSMUST00000107800	protein_coding	alternative2	4	1	45300434	983
ENSMUSG00000108433	processed_pseudogene	Gm19761	ENSMUST00000205372	processed_pseudogene		7	-1	94602408	391
ENSMUSG00000096284	protein_coding	Tcstv1	ENSMUST00000178510	protein_coding	principal1	13	-1	119894746	1280
ENSMUSG00000035601	protein_coding	Trmt10b	ENSMUST00000126972	processed_transcript		4	1	45300434	874
ENSMUSG00000096033	processed_pseudogene	Gm5899	ENSMUST00000071770	processed_pseudogene		7	1	94197210	270
ENSMUSG00000079677	protein_coding	Fdx2	ENSMUST00000215631	retained_intron		9	-1	21073506	681
ENSMUSG00000035601	protein_coding	Trmt10b	ENSMUST00000145756	processed_transcript		4	1	45314098	346
ENSMUSG00000080726	processed_pseudogene	Gm15366	ENSMUST00000118433	processed_pseudogene		8	-1	19038446	1019
ENSMUSG00000108315	lincRNA	Gm44601	ENSMUST00000206678	lincRNA		7	-1	94372572	2720
ENSMUSG00000101579	processed_pseudogene	Gm21181	ENSMUST00000186249	processed_pseudogene		13	-1	119918009	330
ENSMUSG00000108516	processed_pseudogene	Gm44602	ENSMUST00000205948	processed_pseudogene		7	1	94475580	132
ENSMUSG00000079677	protein_coding	Fdx2	ENSMUST00000215338	retained_intron		9	-1	21068506	631
ENSMUSG00000035305	protein_coding	Ror1	ENSMUST00000039630	protein_coding	principal1	4	1	100095791	5762
ENSMUSG00000059895	protein_coding	Ptp4a3	ENSMUST00000230864	processed_transcript		15	1	73723145	639
ENSMUSG00000079677	protein_coding	Fdx2	ENSMUST00000216484	retained_intron		9	-1	21073522	633
ENSMUSG00000096175	protein_coding	Gm21761	ENSMUST00000187530	protein_coding	principal1	13	-1	119929272	1374
ENSMUSG00000006344	protein_coding	Ggt5	ENSMUST00000219247	retained_intron		10	1	75589340	2875
ENSMUSG00000030889	protein_coding	Vwa3a	ENSMUST00000166668	protein_coding	principal1	7	1	120740009	4409
ENSMUSG00000096175	protein_coding	Gm21761	ENSMUST00000179502	protein_coding	principal1	13	-1	119912752	516
ENSMUSG00000086016	antisense	1700084C06Rik	ENSMUST00000135674	antisense		9	1	21091755	750
ENSMUSG00000040296	protein_coding	Ddx58	ENSMUST00000137903	processed_transcript		4	-1	40220600	3533
ENSMUSG00000061847	protein_coding	Defb39	ENSMUST00000075504	protein_coding	principal1	8	-1	19064810	252
ENSMUSG00000040296	protein_coding	Ddx58	ENSMUST00000142055	protein_coding		4	-1	40239700	2127
ENSMUSG00000086385	sense_intronic	Gm12701	ENSMUST00000134206	sense_intronic		4	1	100119621	659
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000127605	nonsense_mediated_decay		19	-1	4163296	1753
ENSMUSG00000110494	antisense	Gm31774	ENSMUST00000212910	antisense		8	-1	117748260	1366
ENSMUSG00000080967	processed_pseudogene	Gm12706	ENSMUST00000121588	processed_pseudogene		4	-1	100362059	698
ENSMUSG00000030889	protein_coding	Vwa3a	ENSMUST00000167213	protein_coding	principal1	7	1	120740047	4148
ENSMUSG00000110520	TEC	Gm45776	ENSMUST00000212366	TEC		8	1	117712570	1522
ENSMUSG00000108378	processed_transcript	Gm44641	ENSMUST00000152342	processed_transcript		7	1	27252176	323
ENSMUSG00000040296	protein_coding	Ddx58	ENSMUST00000139110	processed_transcript		4	-1	40228356	541
ENSMUSG00000040296	protein_coding	Ddx58	ENSMUST00000140616	processed_transcript		4	-1	40208795	435
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000141104	retained_intron		19	-1	4158152	678
ENSMUSG00000030889	protein_coding	Vwa3a	ENSMUST00000165055	protein_coding		7	1	120782393	630
ENSMUSG00000030889	protein_coding	Vwa3a	ENSMUST00000207721	retained_intron		7	1	120782617	2158
ENSMUSG00000040296	protein_coding	Ddx58	ENSMUST00000136435	processed_transcript		4	-1	40208543	386
ENSMUSG00000030237	protein_coding	Slco1a4	ENSMUST00000165990	protein_coding	principal1	6	-1	141856171	3823
ENSMUSG00000040296	protein_coding	Ddx58	ENSMUST00000135966	processed_transcript		4	-1	40214072	756
ENSMUSG00000030889	protein_coding	Vwa3a	ENSMUST00000168430	protein_coding		7	1	120784051	306
ENSMUSG00000030237	protein_coding	Slco1a4	ENSMUST00000163678	protein_coding		6	-1	141856199	622
ENSMUSG00000030889	protein_coding	Vwa3a	ENSMUST00000166083	protein_coding		7	1	120786481	626
ENSMUSG00000030237	protein_coding	Slco1a4	ENSMUST00000204676	retained_intron		6	-1	141853682	2677
ENSMUSG00000030237	protein_coding	Slco1a4	ENSMUST00000032364	protein_coding	principal1	6	-1	141845468	2252
ENSMUSG00000043787	protein_coding	Defb12	ENSMUST00000062113	protein_coding	principal1	8	-1	19114839	1003
ENSMUSG00000030889	protein_coding	Vwa3a	ENSMUST00000033180	protein_coding	principal1	7	1	120739557	4575
ENSMUSG00000108830	TEC	Gm44661	ENSMUST00000208830	TEC		7	-1	120739961	3503
ENSMUSG00000003134	protein_coding	Tbc1d8	ENSMUST00000054462	protein_coding	principal2	1	-1	39478755	4451
ENSMUSG00000075156	protein_coding	Olfr1128	ENSMUST00000102624	protein_coding	principal1	2	-1	87545542	936
ENSMUSG00000063160	protein_coding	Numbl	ENSMUST00000144010	processed_transcript		7	1	27258433	456
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000130469	nonsense_mediated_decay		19	-1	4163300	1979
ENSMUSG00000003134	protein_coding	Tbc1d8	ENSMUST00000192099	nonsense_mediated_decay		1	-1	39372433	454
ENSMUSG00000082417	processed_pseudogene	Gm13740	ENSMUST00000120590	processed_pseudogene		2	-1	87547202	310
ENSMUSG00000025353	protein_coding	Ormdl2	ENSMUST00000026409	protein_coding	principal1	10	-1	128821594	1573
ENSMUSG00000030921	protein_coding	Trim30a	ENSMUST00000076922	protein_coding	principal1	7	-1	104465193	3771
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000027215	protein_coding	principal1	1	-1	44102391	1272
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000154307	retained_intron		19	-1	4163316	2090
ENSMUSG00000025353	protein_coding	Ormdl2	ENSMUST00000219215	protein_coding	principal1	10	-1	128821606	1051
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000156392	protein_coding	principal1	1	-1	44102438	1122
ENSMUSG00000030921	protein_coding	Trim30a	ENSMUST00000125762	processed_transcript		7	-1	104416928	534
ENSMUSG00000113571	TEC	Gm48137	ENSMUST00000223056	TEC		12	1	35140892	2239
ENSMUSG00000031844	protein_coding	Hsd17b2	ENSMUST00000034304	protein_coding	principal1	8	1	117701904	1320
ENSMUSG00000003134	protein_coding	Tbc1d8	ENSMUST00000192531	nonsense_mediated_decay		1	-1	39478661	3434
ENSMUSG00000025353	protein_coding	Ormdl2	ENSMUST00000217685	protein_coding		10	-1	128821591	666
ENSMUSG00000030921	protein_coding	Trim30a	ENSMUST00000142124	retained_intron		7	-1	104412267	314
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000135911	processed_transcript		19	-1	4162330	1143
ENSMUSG00000113792	TEC	Gm10933	ENSMUST00000221891	TEC		12	1	35055101	1861
ENSMUSG00000003134	protein_coding	Tbc1d8	ENSMUST00000193823	protein_coding	alternative2	1	-1	39478700	3512
ENSMUSG00000025353	protein_coding	Ormdl2	ENSMUST00000219524	protein_coding	principal1	10	-1	128821645	724
ENSMUSG00000027748	protein_coding	Trpc4	ENSMUST00000029311	protein_coding	principal3	3	1	54156057	3473
ENSMUSG00000031844	protein_coding	Hsd17b2	ENSMUST00000212052	nonsense_mediated_decay		8	1	117702087	688
ENSMUSG00000020590	protein_coding	Snx13	ENSMUST00000221831	processed_transcript		12	1	35047186	361
ENSMUSG00000096579	processed_pseudogene	Gm17121	ENSMUST00000170414	processed_pseudogene		14	1	7565259	847
ENSMUSG00000003134	protein_coding	Tbc1d8	ENSMUST00000195854	retained_intron		1	-1	39392631	665
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000137431	nonsense_mediated_decay		19	-1	4163285	1418
ENSMUSG00000031844	protein_coding	Hsd17b2	ENSMUST00000212998	processed_transcript		8	1	117720936	474
ENSMUSG00000097530	processed_pseudogene	Kansl2-ps	ENSMUST00000181818	processed_pseudogene		7	1	72672818	1461
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000118483	protein_coding		19	-1	4163285	1409
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000237691	nonsense_mediated_decay		19	-1	4163274	693
ENSMUSG00000021763	protein_coding	BC067074	ENSMUST00000136755	protein_coding	principal1	13	1	113293159	8274
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000026254	protein_coding	principal1	19	1	46152509	6450
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000128190	protein_coding	principal1	1	-1	44102343	1275
ENSMUSG00000021763	protein_coding	BC067074	ENSMUST00000135096	protein_coding		13	1	113351603	660
ENSMUSG00000027748	protein_coding	Trpc4	ENSMUST00000199399	retained_intron		3	1	54156066	2977
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000155303	protein_coding		19	-1	4163300	642
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000147571	protein_coding	principal1	1	-1	44102362	1360
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000151727	retained_intron		19	-1	4163330	411
ENSMUSG00000027748	protein_coding	Trpc4	ENSMUST00000200048	protein_coding	alternative2	3	1	54156104	3170
ENSMUSG00000021763	protein_coding	BC067074	ENSMUST00000078163	protein_coding		13	1	113342548	3546
ENSMUSG00000063160	protein_coding	Numbl	ENSMUST00000079258	protein_coding	principal1	7	1	27258725	2760
ENSMUSG00000024830	protein_coding	Rps6kb2	ENSMUST00000125057	processed_transcript		19	-1	4163354	235
ENSMUSG00000027748	protein_coding	Trpc4	ENSMUST00000199359	retained_intron		3	1	54156373	2790
ENSMUSG00000081132	processed_pseudogene	Gm13744	ENSMUST00000118953	processed_pseudogene		2	-1	87560769	850
ENSMUSG00000079364	protein_coding	Gm3558	ENSMUST00000163790	protein_coding	principal1	14	-1	7568566	2055
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000133677	protein_coding	principal1	1	-1	44102423	935
ENSMUSG00000038276	protein_coding	Asic3	ENSMUST00000049346	protein_coding		5	1	24413392	1853
ENSMUSG00000083688	processed_pseudogene	Gm13743	ENSMUST00000121486	processed_pseudogene		2	-1	87563720	724
ENSMUSG00000029661	protein_coding	Col1a2	ENSMUST00000141483	protein_coding		6	1	4504814	850
ENSMUSG00000045826	protein_coding	Ptprcap	ENSMUST00000236632	protein_coding		19	1	4153604	1082
ENSMUSG00000047090	protein_coding	Tmem198b	ENSMUST00000051011	protein_coding	principal1	10	-1	128804370	2335
ENSMUSG00000063160	protein_coding	Numbl	ENSMUST00000132897	processed_transcript		7	1	27258783	438
ENSMUSG00000059895	protein_coding	Ptp4a3	ENSMUST00000230044	protein_coding		15	1	73723170	1245
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000150911	protein_coding	principal1	1	-1	44102441	960
ENSMUSG00000107516	lincRNA	Gm30784	ENSMUST00000204491	lincRNA		6	1	141866358	794
ENSMUSG00000001103	protein_coding	Sebox	ENSMUST00000001130	protein_coding	principal1	11	1	78503447	1351
ENSMUSG00000078537	protein_coding	B020031M17Rik	ENSMUST00000180768	protein_coding	principal1	13	-1	119950806	925
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000114167	protein_coding	principal2	2	-1	25983282	7981
ENSMUSG00000114864	lincRNA	Gm41071	ENSMUST00000226016	lincRNA		13	-1	113423887	543
ENSMUSG00000078537	protein_coding	B020031M17Rik	ENSMUST00000080505	protein_coding	principal1	13	-1	119950068	522
ENSMUSG00000047090	protein_coding	Tmem198b	ENSMUST00000152966	retained_intron		10	-1	128803961	3156
ENSMUSG00000027748	protein_coding	Trpc4	ENSMUST00000200341	nonsense_mediated_decay		3	1	54156615	3257
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000152239	protein_coding	principal1	1	-1	44101672	1046
ENSMUSG00000114951	processed_pseudogene	Gm20784	ENSMUST00000178019	processed_pseudogene		13	1	119962244	1246
ENSMUSG00000047090	protein_coding	Tmem198b	ENSMUST00000139227	nonsense_mediated_decay		10	-1	128803717	1064
ENSMUSG00000045826	protein_coding	Ptprcap	ENSMUST00000061086	protein_coding	principal1	19	1	4154606	927
ENSMUSG00000001103	protein_coding	Sebox	ENSMUST00000125670	protein_coding		11	1	78503499	1300
ENSMUSG00000063160	protein_coding	Numbl	ENSMUST00000149805	retained_intron		7	1	27258806	8511
ENSMUSG00000115587	processed_pseudogene	Gm29697	ENSMUST00000226494	processed_pseudogene		15	1	38573996	1070
ENSMUSG00000035394	protein_coding	Cfap53	ENSMUST00000114895	protein_coding	principal1	18	1	74283090	1888
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000129702	protein_coding		1	-1	44102433	399
ENSMUSG00000025354	protein_coding	Dnajc14	ENSMUST00000218001	protein_coding		10	1	128804062	772
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000147661	protein_coding		1	-1	44102401	486
ENSMUSG00000063160	protein_coding	Numbl	ENSMUST00000134215	retained_intron		7	1	27261378	3153
ENSMUSG00000102106	lincRNA	2310043O21Rik	ENSMUST00000185323	lincRNA		15	-1	38594934	622
ENSMUSG00000115491	processed_pseudogene	Siah1-ps2	ENSMUST00000227335	processed_pseudogene		15	-1	38576649	845
ENSMUSG00000084974	antisense	Gm15567	ENSMUST00000148699	antisense		7	-1	27257932	2130
ENSMUSG00000114975	processed_pseudogene	Gm49090	ENSMUST00000227913	processed_pseudogene		15	-1	38574824	106
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000127923	protein_coding		1	-1	44102013	429
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000175868	retained_intron		19	1	46152530	1202
ENSMUSG00000038276	protein_coding	Asic3	ENSMUST00000198241	retained_intron		5	1	24413451	2211
ENSMUSG00000061032	protein_coding	Rrp1	ENSMUST00000219374	nonsense_mediated_decay		10	-1	78412992	1852
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000143327	protein_coding		1	-1	44102414	552
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000149502	protein_coding		1	-1	44102437	449
ENSMUSG00000026049	protein_coding	Tex30	ENSMUST00000125540	protein_coding		1	-1	44099995	423
ENSMUSG00000048732	protein_coding	Klhl11	ENSMUST00000056665	protein_coding	principal1	11	-1	100472741	2393
ENSMUSG00000115547	lincRNA	1100001I12Rik	ENSMUST00000228411	lincRNA		15	-1	38659839	672
ENSMUSG00000010205	protein_coding	Raver1	ENSMUST00000115487	protein_coding	principal1	9	-1	21092008	3470
ENSMUSG00000027665	protein_coding	Pik3ca	ENSMUST00000108243	protein_coding	principal1	3	1	32397671	6689
ENSMUSG00000101104	processed_transcript	Gm29247	ENSMUST00000148542	processed_transcript		1	-1	44110045	571
ENSMUSG00000035394	protein_coding	Cfap53	ENSMUST00000176435	nonsense_mediated_decay		18	1	74283122	2086
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000113717	protein_coding		2	1	29965560	7958
ENSMUSG00000101104	processed_transcript	Gm29247	ENSMUST00000134195	processed_transcript		1	-1	44110790	521
ENSMUSG00000027665	protein_coding	Pik3ca	ENSMUST00000108242	protein_coding		3	1	32436376	6171
ENSMUSG00000027665	protein_coding	Pik3ca	ENSMUST00000195230	retained_intron		3	1	32461677	440
ENSMUSG00000038276	protein_coding	Asic3	ENSMUST00000196296	protein_coding	principal1	5	1	24413712	1593
ENSMUSG00000035394	protein_coding	Cfap53	ENSMUST00000177101	nonsense_mediated_decay		18	1	74283162	943
ENSMUSG00000035394	protein_coding	Cfap53	ENSMUST00000176766	processed_transcript		18	1	74294958	487
ENSMUSG00000027665	protein_coding	Pik3ca	ENSMUST00000029201	protein_coding	principal1	3	1	32436151	8917
ENSMUSG00000035394	protein_coding	Cfap53	ENSMUST00000177407	processed_transcript		18	1	74348986	562
ENSMUSG00000038276	protein_coding	Asic3	ENSMUST00000197210	retained_intron		5	1	24415740	1029
ENSMUSG00000095419	processed_pseudogene	Gm14328	ENSMUST00000122178	processed_pseudogene		18	-1	74303931	408
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000143977	nonsense_mediated_decay		2	-1	25966767	5464
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000134970	processed_transcript		2	-1	25935561	316
ENSMUSG00000032175	protein_coding	Tyk2	ENSMUST00000213717	retained_intron		9	-1	21131180	4444
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000148146	processed_transcript		2	-1	25934614	597
ENSMUSG00000038276	protein_coding	Asic3	ENSMUST00000198442	nonsense_mediated_decay		5	1	24416577	537
ENSMUSG00000029518	protein_coding	Rab35	ENSMUST00000031492	protein_coding	principal1	5	1	115631908	2820
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000177406	retained_intron		19	1	46152548	2755
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000134882	protein_coding		2	-1	25983061	3354
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000143918	retained_intron		2	1	29965677	3735
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000176355	processed_transcript		19	1	46152573	386
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000236167	retained_intron		19	1	46152580	2179
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000202286	retained_intron		2	1	29965679	1471
ENSMUSG00000029518	protein_coding	Rab35	ENSMUST00000138885	nonsense_mediated_decay		5	1	115632141	966
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000134054	protein_coding		2	-1	25966896	795
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000105344	protein_coding	alternative2	10	-1	80433637	2946
ENSMUSG00000020590	protein_coding	Snx13	ENSMUST00000221272	nonsense_mediated_decay		12	1	35047186	2027
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000151593	protein_coding		2	-1	25965750	530
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000228188	protein_coding	alternative1	16	-1	88289864	3221
ENSMUSG00000091363	processed_pseudogene	Gm7701	ENSMUST00000163185	processed_pseudogene		18	1	24257378	1479
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000142028	protein_coding		2	-1	25966804	491
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000023652	protein_coding	alternative1	16	-1	88290243	3554
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000139937	nonsense_mediated_decay		2	-1	25983208	667
ENSMUSG00000096141	protein_coding	Dnah7a	ENSMUST00000094964	protein_coding	principal1	1	-1	53706761	12245
ENSMUSG00000079440	protein_coding	Alpi	ENSMUST00000113270	protein_coding	principal1	1	-1	87101606	2337
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000127823	protein_coding		2	-1	25983056	378
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000091268	protein_coding	alternative2	2	-1	25983282	7978
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000072256	protein_coding	principal4	16	-1	88290258	3655
ENSMUSG00000026933	protein_coding	Camsap1	ENSMUST00000183461	protein_coding	alternative2	2	-1	25983282	5090
ENSMUSG00000112328	processed_pseudogene	Gm47325	ENSMUST00000219685	processed_pseudogene		10	1	100651630	313
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000227986	protein_coding	alternative1	16	-1	88289731	2942
ENSMUSG00000097646	processed_pseudogene	Gm26864	ENSMUST00000181346	processed_pseudogene		19	-1	12247646	156
ENSMUSG00000096141	protein_coding	Dnah7a	ENSMUST00000189677	processed_transcript		1	-1	53706784	732
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000228034	protein_coding		16	-1	88289731	2708
ENSMUSG00000112104	lincRNA	Gm35722	ENSMUST00000218270	lincRNA		10	-1	100741635	1625
ENSMUSG00000111906	processed_pseudogene	Gm19233	ENSMUST00000219772	processed_pseudogene		10	1	101271621	936
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000211444	protein_coding		16	-1	88290214	3528
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000123874	protein_coding		19	1	4148619	625
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000210700	retained_intron		16	-1	87923831	1394
ENSMUSG00000100940	processed_pseudogene	Gm29372	ENSMUST00000191416	processed_pseudogene		1	-1	87117158	364
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000211635	retained_intron		16	-1	88290215	3296
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000113741	protein_coding		2	1	29965680	781
ENSMUSG00000097017	lincRNA	Gm26707	ENSMUST00000181552	lincRNA		7	1	25816654	3902
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000226447	retained_intron		16	-1	88290265	3614
ENSMUSG00000108691	processed_pseudogene	Gm45226	ENSMUST00000206602	processed_pseudogene		7	1	25810175	288
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000210910	retained_intron		16	-1	88290228	3116
ENSMUSG00000059895	protein_coding	Ptp4a3	ENSMUST00000230177	protein_coding	principal1	15	1	73724798	1680
ENSMUSG00000022935	protein_coding	Grik1	ENSMUST00000114137	protein_coding		16	-1	88056176	2894
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000137454	protein_coding		9	-1	40310054	2667
ENSMUSG00000059895	protein_coding	Ptp4a3	ENSMUST00000163582	protein_coding	principal1	15	1	73724930	2270
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000177531	protein_coding		8	1	84686339	902
ENSMUSG00000059895	protein_coding	Ptp4a3	ENSMUST00000230307	protein_coding		15	1	73747634	1037
ENSMUSG00000006344	protein_coding	Ggt5	ENSMUST00000072217	protein_coding	principal1	10	1	75589340	4410
ENSMUSG00000059895	protein_coding	Ptp4a3	ENSMUST00000231209	protein_coding		15	1	73747718	1105
ENSMUSG00000021114	protein_coding	Atp6v1d	ENSMUST00000021536	protein_coding	principal1	12	-1	78861638	3667
ENSMUSG00000006344	protein_coding	Ggt5	ENSMUST00000189972	protein_coding		10	1	75589381	648
ENSMUSG00000059895	protein_coding	Ptp4a3	ENSMUST00000229339	retained_intron		15	1	73748026	6459
ENSMUSG00000050989	protein_coding	Selenon	ENSMUST00000060435	protein_coding	principal1	4	-1	134552166	3445
ENSMUSG00000006344	protein_coding	Ggt5	ENSMUST00000219214	retained_intron		10	1	75589382	3071
ENSMUSG00000025354	protein_coding	Dnajc14	ENSMUST00000217745	protein_coding	principal1	10	1	128805554	4133
ENSMUSG00000021114	protein_coding	Atp6v1d	ENSMUST00000219316	retained_intron		12	-1	78845391	775
ENSMUSG00000050989	protein_coding	Selenon	ENSMUST00000127585	processed_transcript		4	-1	134541022	600
ENSMUSG00000006344	protein_coding	Ggt5	ENSMUST00000218807	nonsense_mediated_decay		10	1	75589601	2051
ENSMUSG00000025354	protein_coding	Dnajc14	ENSMUST00000219473	retained_intron		10	1	128805583	3203
ENSMUSG00000021114	protein_coding	Atp6v1d	ENSMUST00000219377	retained_intron		12	-1	78850516	634
ENSMUSG00000006344	protein_coding	Ggt5	ENSMUST00000189991	protein_coding		10	1	75589792	722
ENSMUSG00000021114	protein_coding	Atp6v1d	ENSMUST00000219891	processed_transcript		12	-1	78861495	381
ENSMUSG00000025354	protein_coding	Dnajc14	ENSMUST00000219508	protein_coding	principal1	10	1	128805676	2298
ENSMUSG00000062272	protein_coding	Olfr1129	ENSMUST00000214773	protein_coding	principal1	2	1	87573903	2403
ENSMUSG00000006344	protein_coding	Ggt5	ENSMUST00000188444	retained_intron		10	1	75604081	825
ENSMUSG00000059895	protein_coding	Ptp4a3	ENSMUST00000053232	protein_coding	principal1	15	1	73748374	3260
ENSMUSG00000081457	processed_pseudogene	Gm13488	ENSMUST00000120419	processed_pseudogene		2	-1	50521860	179
ENSMUSG00000034675	protein_coding	Dbn1	ENSMUST00000109923	protein_coding	principal3	13	-1	55488111	2940
ENSMUSG00000059895	protein_coding	Ptp4a3	ENSMUST00000165541	protein_coding	principal1	15	1	73723145	3539
ENSMUSG00000021815	protein_coding	Mss51	ENSMUST00000022353	protein_coding	principal1	14	-1	20496901	1826
ENSMUSG00000083449	processed_pseudogene	Gm13487	ENSMUST00000122240	processed_pseudogene		2	-1	50522987	864
ENSMUSG00000062272	protein_coding	Olfr1129	ENSMUST00000213315	protein_coding	principal1	2	1	87573902	2255
ENSMUSG00000005198	protein_coding	Polr2a	ENSMUST00000058470	protein_coding	principal1	11	-1	69758637	6740
ENSMUSG00000059895	protein_coding	Ptp4a3	ENSMUST00000167582	protein_coding		15	1	73723145	2640
ENSMUSG00000062272	protein_coding	Olfr1129	ENSMUST00000081034	protein_coding	principal1	2	1	87575086	945
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000100225	protein_coding	alternative1	2	1	29965680	7892
ENSMUSG00000085429	lincRNA	Gm13485	ENSMUST00000146690	lincRNA		2	1	50547914	659
ENSMUSG00000090744	protein_coding	Gm6871	ENSMUST00000073410	protein_coding	alternative2	7	-1	41560829	1430
ENSMUSG00000025354	protein_coding	Dnajc14	ENSMUST00000026410	protein_coding	principal1	10	1	128805676	4229
ENSMUSG00000005198	protein_coding	Polr2a	ENSMUST00000156588	processed_transcript		11	-1	69737348	689
ENSMUSG00000034675	protein_coding	Dbn1	ENSMUST00000021950	protein_coding	alternative2	13	-1	55488111	3078
ENSMUSG00000090744	protein_coding	Gm6871	ENSMUST00000110214	protein_coding	principal5	7	-1	41573662	1638
ENSMUSG00000105819	processed_pseudogene	Gm42579	ENSMUST00000200512	processed_pseudogene		3	-1	90709614	734
ENSMUSG00000106117	processed_pseudogene	Gm5284	ENSMUST00000199053	processed_pseudogene		3	-1	90723513	903
ENSMUSG00000114659	processed_pseudogene	Gm31191	ENSMUST00000223591	processed_pseudogene		13	-1	113480243	269
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000008893	protein_coding	principal1	19	1	4148619	1888
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000095083	protein_coding	alternative1	2	1	29965680	7883
ENSMUSG00000005198	protein_coding	Polr2a	ENSMUST00000151586	processed_transcript		11	-1	69742571	586
ENSMUSG00000090744	protein_coding	Gm6871	ENSMUST00000164677	protein_coding		7	-1	41560795	531
ENSMUSG00000090744	protein_coding	Gm6871	ENSMUST00000171059	protein_coding		7	-1	41573662	462
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000046257	protein_coding	alternative1	2	1	29965683	7820
ENSMUSG00000025354	protein_coding	Dnajc14	ENSMUST00000218511	protein_coding		10	1	128805880	732
ENSMUSG00000003762	protein_coding	Coq8b	ENSMUST00000003860	protein_coding	principal1	7	1	27233023	2181
ENSMUSG00000090341	transcribed_unprocessed_pseudogene	Gm17217	ENSMUST00000166613	transcribed_unprocessed_pseudogene		7	-1	41573745	469
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000142878	retained_intron		19	1	4148628	322
ENSMUSG00000114790	lincRNA	4921509O07Rik	ENSMUST00000223835	lincRNA		13	-1	113502844	2567
ENSMUSG00000025354	protein_coding	Dnajc14	ENSMUST00000218765	processed_transcript		10	1	128807378	561
ENSMUSG00000114364	processed_pseudogene	Gm47426	ENSMUST00000225270	processed_pseudogene		13	1	113488956	180
ENSMUSG00000036500	protein_coding	Akp3	ENSMUST00000187662	retained_intron		1	1	87124973	1602
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000148733	retained_intron		19	1	4148632	384
ENSMUSG00000112429	antisense	Gm47093	ENSMUST00000219535	antisense		10	-1	128801393	1736
ENSMUSG00000003762	protein_coding	Coq8b	ENSMUST00000108378	protein_coding	principal1	7	1	27233213	2276
ENSMUSG00000005198	protein_coding	Polr2a	ENSMUST00000071213	protein_coding		11	-1	69758223	5799
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000080812	protein_coding	principal1	6	-1	30391023	1824
ENSMUSG00000054191	protein_coding	Klf1	ENSMUST00000067060	protein_coding	alternative2	8	1	84901928	1530
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000152391	protein_coding		6	-1	30391002	1673
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000237125	protein_coding		19	1	4148632	854
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000129241	protein_coding	principal3	2	1	29978380	7585
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000202393	retained_intron		6	-1	30367218	831
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000238871	protein_coding		2	1	29980077	336
ENSMUSG00000111869	protein_coding	Olfr342	ENSMUST00000216275	protein_coding	principal1	2	1	36524998	3818
ENSMUSG00000054191	protein_coding	Klf1	ENSMUST00000239392	protein_coding	principal2	8	1	84901928	1534
ENSMUSG00000025862	protein_coding	Stag2	ENSMUST00000115073	protein_coding	alternative1	X	1	42149317	6171
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000131827	retained_intron		2	1	29991956	570
ENSMUSG00000082846	processed_pseudogene	Gm13484	ENSMUST00000120738	processed_pseudogene		2	-1	50658067	412
ENSMUSG00000111869	protein_coding	Olfr342	ENSMUST00000074192	protein_coding	principal1	2	1	36527388	1054
ENSMUSG00000003762	protein_coding	Coq8b	ENSMUST00000128090	nonsense_mediated_decay		7	1	27233361	1987
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000102992	protein_coding		6	-1	30391028	1865
ENSMUSG00000078427	protein_coding	Sarnp	ENSMUST00000218622	processed_transcript		10	1	128817333	427
ENSMUSG00000083270	processed_pseudogene	Gm13498	ENSMUST00000119159	processed_pseudogene		2	1	50909684	2166
ENSMUSG00000110769	unprocessed_pseudogene	Gm47783	ENSMUST00000213794	unprocessed_pseudogene		2	1	36526820	78
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000115184	protein_coding		6	-1	30391010	1504
ENSMUSG00000080960	unprocessed_pseudogene	Olfr343-ps1	ENSMUST00000121883	unprocessed_pseudogene		2	1	36539197	303
ENSMUSG00000003762	protein_coding	Coq8b	ENSMUST00000143372	processed_transcript		7	1	27240054	644
ENSMUSG00000003762	protein_coding	Coq8b	ENSMUST00000206312	retained_intron		7	1	27240315	2804
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000138983	retained_intron		6	-1	30372980	447
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000136255	nonsense_mediated_decay		6	-1	30391006	787
ENSMUSG00000049339	protein_coding	Retreg2	ENSMUST00000188873	nonsense_mediated_decay		1	1	75142778	2477
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000149038	retained_intron		2	1	30001884	1025
ENSMUSG00000096822	protein_coding	Olfr344	ENSMUST00000215879	protein_coding	principal1	2	1	36566662	7675
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000202844	retained_intron		2	1	30004088	477
ENSMUSG00000074968	protein_coding	Ano3	ENSMUST00000099623	protein_coding	principal1	2	-1	110950923	6705
ENSMUSG00000055567	protein_coding	Unc80	ENSMUST00000061620	protein_coding	principal1	1	1	66468367	13613
ENSMUSG00000025862	protein_coding	Stag2	ENSMUST00000136323	retained_intron		X	1	42149541	1967
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000149846	retained_intron		2	1	30021821	800
ENSMUSG00000096822	protein_coding	Olfr344	ENSMUST00000075474	protein_coding	principal1	2	1	36568600	930
ENSMUSG00000003762	protein_coding	Coq8b	ENSMUST00000142910	retained_intron		7	1	27250183	1228
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000126945	processed_transcript		6	-1	30382668	477
ENSMUSG00000025862	protein_coding	Stag2	ENSMUST00000127618	protein_coding		X	1	42149683	295
ENSMUSG00000040703	protein_coding	Cyp2s1	ENSMUST00000043314	protein_coding	principal1	7	-1	25816653	2745
ENSMUSG00000003762	protein_coding	Coq8b	ENSMUST00000123012	processed_transcript		7	1	27250385	709
ENSMUSG00000055567	protein_coding	Unc80	ENSMUST00000114008	nonsense_mediated_decay		1	1	66468414	1118
ENSMUSG00000083622	processed_pseudogene	Gm15570	ENSMUST00000122093	processed_pseudogene		7	-1	27272392	625
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000124494	retained_intron		2	1	30027564	457
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000236397	nonsense_mediated_decay		19	1	4148654	1709
ENSMUSG00000025862	protein_coding	Stag2	ENSMUST00000141414	processed_transcript		X	1	42150154	699
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000147990	nonsense_mediated_decay		6	-1	30390989	556
ENSMUSG00000055567	protein_coding	Unc80	ENSMUST00000136727	retained_intron		1	1	66468430	1167
ENSMUSG00000059251	protein_coding	Olfr345	ENSMUST00000076850	protein_coding	principal1	2	1	36640041	936
ENSMUSG00000055567	protein_coding	Unc80	ENSMUST00000212557	protein_coding		1	1	66468447	9777
ENSMUSG00000040703	protein_coding	Cyp2s1	ENSMUST00000108395	protein_coding		7	-1	25816913	3161
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000152453	retained_intron		2	1	30027597	814
ENSMUSG00000032841	protein_coding	Prr5l	ENSMUST00000043845	protein_coding	principal1	2	-1	101797708	2290
ENSMUSG00000083735	processed_pseudogene	Gm12495	ENSMUST00000119750	processed_pseudogene		4	1	53308226	447
ENSMUSG00000055567	protein_coding	Unc80	ENSMUST00000187179	retained_intron		1	1	66673730	587
ENSMUSG00000036500	protein_coding	Akp3	ENSMUST00000044878	protein_coding	principal1	1	1	87125008	1680
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000201758	retained_intron		2	1	30030309	719
ENSMUSG00000097290	lincRNA	1300002E11Rik	ENSMUST00000211443	lincRNA		16	1	21794318	767
ENSMUSG00000097290	lincRNA	1300002E11Rik	ENSMUST00000231300	lincRNA		16	1	21794334	431
ENSMUSG00000032841	protein_coding	Prr5l	ENSMUST00000141814	protein_coding		2	-1	101797650	715
ENSMUSG00000097290	lincRNA	1300002E11Rik	ENSMUST00000209449	lincRNA		16	1	21794342	580
ENSMUSG00000025862	protein_coding	Stag2	ENSMUST00000069619	protein_coding	principal3	X	1	42150701	5825
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000236023	retained_intron		19	1	4148657	2814
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000152101	retained_intron		6	-1	30391010	2908
ENSMUSG00000055567	protein_coding	Unc80	ENSMUST00000152844	protein_coding		1	1	66679699	1912
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000134194	processed_transcript		19	1	4148661	736
ENSMUSG00000057738	protein_coding	Sptan1	ENSMUST00000113719	protein_coding		2	1	29965560	8018
ENSMUSG00000025862	protein_coding	Stag2	ENSMUST00000123245	protein_coding		X	1	42151014	294
ENSMUSG00000039130	protein_coding	Zc3hc1	ENSMUST00000129796	retained_intron		6	-1	30391014	362
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000143613	retained_intron		19	1	4148664	563
ENSMUSG00000103375	TEC	Gm37181	ENSMUST00000192513	TEC		1	-1	66692356	1727
ENSMUSG00000000399	protein_coding	Ndufa9	ENSMUST00000205002	protein_coding	principal2	6	-1	126849125	1445
ENSMUSG00000048327	protein_coding	Ckap2l	ENSMUST00000052708	protein_coding	principal1	2	-1	129297212	3137
ENSMUSG00000032841	protein_coding	Prr5l	ENSMUST00000125985	protein_coding		2	-1	101838980	648
ENSMUSG00000025862	protein_coding	Stag2	ENSMUST00000128799	protein_coding		X	1	42152180	774
ENSMUSG00000090147	processed_pseudogene	Gm3329	ENSMUST00000159873	processed_pseudogene		19	1	15943610	556
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000237578	retained_intron		19	1	4148667	771
ENSMUSG00000040703	protein_coding	Cyp2s1	ENSMUST00000152560	retained_intron		7	-1	25816558	2741
ENSMUSG00000032841	protein_coding	Prr5l	ENSMUST00000154525	protein_coding		2	-1	101883014	475
ENSMUSG00000054662	protein_coding	Ano9	ENSMUST00000067836	protein_coding	principal1	7	-1	141117806	3019
ENSMUSG00000097290	lincRNA	1300002E11Rik	ENSMUST00000181780	lincRNA		16	1	21794347	1650
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000140419	retained_intron		19	1	4150543	737
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000176992	processed_transcript		19	1	46246088	5981
ENSMUSG00000000399	protein_coding	Ndufa9	ENSMUST00000088194	protein_coding	alternative2	6	-1	126849125	1238
ENSMUSG00000025862	protein_coding	Stag2	ENSMUST00000115072	protein_coding	principal3	X	1	42149412	5955
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000135498	retained_intron		19	1	4151370	552
ENSMUSG00000032841	protein_coding	Prr5l	ENSMUST00000124802	protein_coding		2	-1	101798054	380
ENSMUSG00000061032	protein_coding	Rrp1	ENSMUST00000062678	protein_coding	principal1	10	-1	78413043	1984
ENSMUSG00000085485	antisense	Gm14024	ENSMUST00000141964	antisense		2	1	129246376	560
ENSMUSG00000104042	TEC	Gm37564	ENSMUST00000195000	TEC		X	-1	42150181	330
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000176574	protein_coding		19	1	46254067	561
ENSMUSG00000000399	protein_coding	Ndufa9	ENSMUST00000200890	retained_intron		6	-1	126849136	919
ENSMUSG00000040703	protein_coding	Cyp2s1	ENSMUST00000156714	protein_coding		7	-1	25815392	566
ENSMUSG00000032841	protein_coding	Prr5l	ENSMUST00000144549	protein_coding		2	-1	101814333	288
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000148189	retained_intron		19	1	4151580	852
ENSMUSG00000102090	processed_pseudogene	Gm8964	ENSMUST00000165944	processed_pseudogene		1	1	152128585	805
ENSMUSG00000115312	processed_pseudogene	Gm8518	ENSMUST00000228819	processed_pseudogene		14	-1	50978936	490
ENSMUSG00000097290	lincRNA	1300002E11Rik	ENSMUST00000209728	lincRNA		16	1	21794356	701
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000177512	nonsense_mediated_decay		19	1	46266092	582
ENSMUSG00000024835	protein_coding	Coro1b	ENSMUST00000235477	retained_intron		19	1	4153062	550
ENSMUSG00000107368	antisense	1700018A23Rik	ENSMUST00000201350	antisense		6	1	126822377	398
ENSMUSG00000114997	processed_pseudogene	Gm49038	ENSMUST00000228496	processed_pseudogene		14	-1	50997075	950
ENSMUSG00000097290	lincRNA	1300002E11Rik	ENSMUST00000181960	lincRNA		16	1	21794362	574
ENSMUSG00000061032	protein_coding	Rrp1	ENSMUST00000219406	retained_intron		10	-1	78403616	695
ENSMUSG00000032841	protein_coding	Prr5l	ENSMUST00000140387	processed_transcript		2	-1	101797733	427
ENSMUSG00000097290	lincRNA	1300002E11Rik	ENSMUST00000209429	lincRNA		16	1	21794370	1139
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000176853	processed_transcript		19	1	46268797	340
ENSMUSG00000061032	protein_coding	Rrp1	ENSMUST00000218962	retained_intron		10	-1	78405738	600
ENSMUSG00000032841	protein_coding	Prr5l	ENSMUST00000127358	processed_transcript		2	-1	101883027	321
ENSMUSG00000114009	TEC	Gm47606	ENSMUST00000220524	TEC		13	-1	19673934	1553
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000176422	retained_intron		19	1	46269718	2383
ENSMUSG00000097290	lincRNA	1300002E11Rik	ENSMUST00000180830	lincRNA		16	1	21794392	3557
ENSMUSG00000101513	lincRNA	Gm28853	ENSMUST00000188084	lincRNA		Y	-1	26613352	1157
ENSMUSG00000037600	protein_coding	Kdf1	ENSMUST00000149807	protein_coding		4	1	133518963	1119
ENSMUSG00000116535	processed_pseudogene	Gm5962	ENSMUST00000231614	processed_pseudogene		16	-1	21841544	495
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000176576	retained_intron		19	1	46279873	919
ENSMUSG00000021872	protein_coding	Rnase10	ENSMUST00000164632	protein_coding	alternative2	14	1	51007751	1521
ENSMUSG00000032841	protein_coding	Prr5l	ENSMUST00000163762	protein_coding	principal1	2	-1	101838980	4159
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000110297	protein_coding		15	1	41447482	4599
ENSMUSG00000060049	protein_coding	Olfr235	ENSMUST00000207969	protein_coding	principal1	19	1	12261032	2447
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000175747	nonsense_mediated_decay		19	1	46280180	630
ENSMUSG00000101513	lincRNA	Gm28853	ENSMUST00000188505	lincRNA		Y	-1	26613243	621
ENSMUSG00000101513	lincRNA	Gm28853	ENSMUST00000185271	lincRNA		Y	-1	26613243	437
ENSMUSG00000060049	protein_coding	Olfr235	ENSMUST00000214638	protein_coding	principal1	19	1	12261034	3459
ENSMUSG00000032841	protein_coding	Prr5l	ENSMUST00000171088	protein_coding	principal1	2	-1	101797707	4296
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000175706	retained_intron		19	1	46280335	612
ENSMUSG00000060049	protein_coding	Olfr235	ENSMUST00000215407	protein_coding	principal1	19	1	12261037	2633
ENSMUSG00000101809	lincRNA	Gm28852	ENSMUST00000186666	lincRNA		Y	1	26648450	2160
ENSMUSG00000078427	protein_coding	Sarnp	ENSMUST00000105230	protein_coding	principal1	10	1	128821894	918
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000176525	processed_transcript		19	1	46282843	484
ENSMUSG00000099841	unprocessed_pseudogene	Gm28855	ENSMUST00000188680	unprocessed_pseudogene		Y	1	26653194	315
ENSMUSG00000060049	protein_coding	Olfr235	ENSMUST00000214613	protein_coding	principal1	19	1	12261163	2217
ENSMUSG00000087465	lincRNA	Gm13905	ENSMUST00000140009	lincRNA		2	1	101872175	579
ENSMUSG00000099573	unprocessed_pseudogene	Gm28854	ENSMUST00000186218	unprocessed_pseudogene		Y	1	26689809	696
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000175878	retained_intron		19	1	46283001	635
ENSMUSG00000060049	protein_coding	Olfr235	ENSMUST00000214551	protein_coding	principal1	19	1	12263971	2240
ENSMUSG00000021872	protein_coding	Rnase10	ENSMUST00000022424	protein_coding	principal3	14	1	51007929	1629
ENSMUSG00000025224	protein_coding	Gbf1	ENSMUST00000176046	retained_intron		19	1	46284563	592
ENSMUSG00000078427	protein_coding	Sarnp	ENSMUST00000219512	protein_coding		10	1	128821897	953
ENSMUSG00000102104	lincRNA	Gm28858	ENSMUST00000190517	lincRNA		Y	-1	26731671	166
ENSMUSG00000034675	protein_coding	Dbn1	ENSMUST00000109921	protein_coding	alternative2	13	-1	55488061	2378
ENSMUSG00000086719	antisense	Gm16275	ENSMUST00000147774	antisense		17	1	23771841	712
ENSMUSG00000086816	antisense	Gm16726	ENSMUST00000130184	antisense		19	-1	46267669	892
ENSMUSG00000078427	protein_coding	Sarnp	ENSMUST00000220150	retained_intron		10	1	128821908	423
ENSMUSG00000093525	processed_pseudogene	Gm8974	ENSMUST00000175770	processed_pseudogene		19	-1	46205858	479
ENSMUSG00000060049	protein_coding	Olfr235	ENSMUST00000073507	protein_coding	principal1	19	1	12268163	1079
ENSMUSG00000054662	protein_coding	Ano9	ENSMUST00000210496	retained_intron		7	-1	141117773	3088
ENSMUSG00000061032	protein_coding	Rrp1	ENSMUST00000217835	processed_transcript		10	-1	78412990	845
ENSMUSG00000034675	protein_coding	Dbn1	ENSMUST00000135705	retained_intron		13	-1	55488066	2119
ENSMUSG00000078427	protein_coding	Sarnp	ENSMUST00000220381	nonsense_mediated_decay		10	1	128821932	1084
ENSMUSG00000090467	processed_pseudogene	Gm4613	ENSMUST00000165488	processed_pseudogene		7	-1	25828877	276
ENSMUSG00000026047	protein_coding	Poglut2	ENSMUST00000065767	protein_coding	principal1	1	-1	44118808	2359
ENSMUSG00000054662	protein_coding	Ano9	ENSMUST00000211515	retained_intron		7	-1	141108674	3112
ENSMUSG00000034675	protein_coding	Dbn1	ENSMUST00000139516	retained_intron		13	-1	55482144	419
ENSMUSG00000030001	protein_coding	Figla	ENSMUST00000201361	processed_transcript		6	1	86016171	359
ENSMUSG00000061032	protein_coding	Rrp1	ENSMUST00000219901	processed_transcript		10	-1	78412855	566
ENSMUSG00000034675	protein_coding	Dbn1	ENSMUST00000175813	retained_intron		13	-1	55482257	732
ENSMUSG00000054662	protein_coding	Ano9	ENSMUST00000210927	retained_intron		7	-1	141102676	873
ENSMUSG00000061032	protein_coding	Rrp1	ENSMUST00000219141	retained_intron		10	-1	78409591	582
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000223764	protein_coding		19	1	45363734	438
ENSMUSG00000054662	protein_coding	Ano9	ENSMUST00000210085	retained_intron		7	-1	141104061	663
ENSMUSG00000034675	protein_coding	Dbn1	ENSMUST00000139275	protein_coding		13	-1	55487633	735
ENSMUSG00000074968	protein_coding	Ano3	ENSMUST00000111019	retained_intron		2	-1	110950372	2432
ENSMUSG00000052382	protein_coding	Rnase9	ENSMUST00000064214	protein_coding	principal1	14	-1	51041869	1189
ENSMUSG00000054662	protein_coding	Ano9	ENSMUST00000210763	retained_intron		7	-1	141106945	774
ENSMUSG00000074968	protein_coding	Ano3	ENSMUST00000140777	protein_coding		2	-1	110761564	638
ENSMUSG00000034675	protein_coding	Dbn1	ENSMUST00000124480	processed_transcript		13	-1	55486660	573
ENSMUSG00000023911	protein_coding	Flywch2	ENSMUST00000024704	protein_coding	principal1	17	-1	23786081	694
ENSMUSG00000061032	protein_coding	Rrp1	ENSMUST00000217824	retained_intron		10	-1	78412990	576
ENSMUSG00000034675	protein_coding	Dbn1	ENSMUST00000127867	retained_intron		13	-1	55483969	789
ENSMUSG00000100055	protein_coding	Gm20890	ENSMUST00000189518	protein_coding	principal1	Y	-1	26776799	923
ENSMUSG00000059648	protein_coding	Rnase11	ENSMUST00000076106	protein_coding	principal1	14	-1	51050163	713
ENSMUSG00000030001	protein_coding	Figla	ENSMUST00000032070	protein_coding	principal1	6	1	86017191	759
ENSMUSG00000023911	protein_coding	Flywch2	ENSMUST00000122991	nonsense_mediated_decay		17	-1	23779791	434
ENSMUSG00000023911	protein_coding	Flywch2	ENSMUST00000127144	nonsense_mediated_decay		17	-1	23786052	891
ENSMUSG00000026047	protein_coding	Poglut2	ENSMUST00000141125	retained_intron		1	-1	44118753	2085
ENSMUSG00000089827	processed_transcript	1700023H06Rik	ENSMUST00000161006	processed_transcript		13	-1	80885524	1044
ENSMUSG00000028789	protein_coding	Azin2	ENSMUST00000119354	protein_coding		4	-1	128962420	1921
ENSMUSG00000026047	protein_coding	Poglut2	ENSMUST00000027213	protein_coding		1	-1	44118765	1765
ENSMUSG00000074794	protein_coding	Arrdc3	ENSMUST00000159090	retained_intron		13	1	80883384	2784
ENSMUSG00000078183	processed_pseudogene	Gm15610	ENSMUST00000120584	processed_pseudogene		5	1	8971948	195
ENSMUSG00000026047	protein_coding	Poglut2	ENSMUST00000149665	retained_intron		1	-1	44118765	2031
ENSMUSG00000092474	antisense	Gm20478	ENSMUST00000173648	antisense		17	1	36167982	1031
ENSMUSG00000026047	protein_coding	Poglut2	ENSMUST00000152643	nonsense_mediated_decay		1	-1	44118701	864
ENSMUSG00000042250	protein_coding	Pglyrp4	ENSMUST00000047745	protein_coding	principal3	3	1	90726911	1218
ENSMUSG00000061474	protein_coding	Mrps36	ENSMUST00000109333	protein_coding	principal3	13	-1	100744659	701
ENSMUSG00000042250	protein_coding	Pglyrp4	ENSMUST00000156268	processed_transcript		3	1	90738133	1490
ENSMUSG00000033618	protein_coding	Map3k13	ENSMUST00000231988	protein_coding	principal1	16	1	21794346	8583
ENSMUSG00000033618	protein_coding	Map3k13	ENSMUST00000232240	protein_coding	principal1	16	1	21825942	8487
ENSMUSG00000037600	protein_coding	Kdf1	ENSMUST00000042919	protein_coding	principal2	4	1	133518992	1708
ENSMUSG00000025355	protein_coding	Mmp19	ENSMUST00000219404	protein_coding	alternative2	10	1	128790910	2236
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000121357	protein_coding		9	-1	40346290	7334
ENSMUSG00000033618	protein_coding	Map3k13	ENSMUST00000042065	protein_coding	principal1	16	1	21891969	6709
ENSMUSG00000042250	protein_coding	Pglyrp4	ENSMUST00000169698	protein_coding	alternative2	3	1	90726906	2229
ENSMUSG00000103744	TEC	Gm38238	ENSMUST00000194334	TEC		1	-1	152292528	346
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000045682	protein_coding	principal1	9	-1	40455764	7488
ENSMUSG00000024290	protein_coding	Rock1	ENSMUST00000067947	protein_coding	principal1	18	-1	10182045	6440
ENSMUSG00000037600	protein_coding	Kdf1	ENSMUST00000153811	protein_coding		4	1	133519023	841
ENSMUSG00000061474	protein_coding	Mrps36	ENSMUST00000078573	protein_coding	alternative1	13	-1	100744657	571
ENSMUSG00000116862	lincRNA	Gm49607	ENSMUST00000232439	lincRNA		16	-1	21836555	933
ENSMUSG00000000420	protein_coding	Galnt1	ENSMUST00000000430	protein_coding	principal1	18	1	24205344	3977
ENSMUSG00000020409	protein_coding	Slu7	ENSMUST00000126128	protein_coding		11	1	43433744	574
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000216821	protein_coding		9	-1	40376421	7445
ENSMUSG00000024290	protein_coding	Rock1	ENSMUST00000235067	retained_intron		18	-1	10067910	813
ENSMUSG00000097401	lincRNA	Gm26744	ENSMUST00000181834	lincRNA		16	-1	21845776	1731
ENSMUSG00000037600	protein_coding	Kdf1	ENSMUST00000105901	protein_coding	principal2	4	1	133519055	1699
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000119373	protein_coding		9	-1	40531383	3857
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000211853	protein_coding		9	-1	40401869	2659
ENSMUSG00000032175	protein_coding	Tyk2	ENSMUST00000216874	protein_coding	principal2	9	-1	21131232	4828
ENSMUSG00000000420	protein_coding	Galnt1	ENSMUST00000170243	protein_coding	principal1	18	1	24205767	4108
ENSMUSG00000037600	protein_coding	Kdf1	ENSMUST00000121797	protein_coding	alternative2	4	1	133519083	2256
ENSMUSG00000024290	protein_coding	Rock1	ENSMUST00000234610	nonsense_mediated_decay		18	-1	10150328	4320
ENSMUSG00000025355	protein_coding	Mmp19	ENSMUST00000026411	protein_coding	principal2	10	1	128790961	3402
ENSMUSG00000000420	protein_coding	Galnt1	ENSMUST00000164998	protein_coding		18	1	24205959	980
ENSMUSG00000032175	protein_coding	Tyk2	ENSMUST00000214454	protein_coding	alternative2	9	-1	21131243	4770
ENSMUSG00000024290	protein_coding	Rock1	ENSMUST00000234463	retained_intron		18	-1	10072143	3494
ENSMUSG00000024290	protein_coding	Rock1	ENSMUST00000234926	retained_intron		18	-1	10088208	3840
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000118159	protein_coding		9	-1	40392152	2781
ENSMUSG00000040963	protein_coding	Asgr2	ENSMUST00000102572	protein_coding	principal1	11	1	70092644	1373
ENSMUSG00000025355	protein_coding	Mmp19	ENSMUST00000218021	retained_intron		10	1	128790962	349
ENSMUSG00000073402	protein_coding	Gm8909	ENSMUST00000173353	protein_coding	alternative2	17	-1	36168523	1428
ENSMUSG00000024290	protein_coding	Rock1	ENSMUST00000234050	retained_intron		18	-1	10098813	1877
ENSMUSG00000000420	protein_coding	Galnt1	ENSMUST00000171583	nonsense_mediated_decay		18	1	24238323	678
ENSMUSG00000032175	protein_coding	Tyk2	ENSMUST00000214864	protein_coding		9	-1	21131243	1662
ENSMUSG00000061474	protein_coding	Mrps36	ENSMUST00000132955	processed_transcript		13	-1	100744131	482
ENSMUSG00000032175	protein_coding	Tyk2	ENSMUST00000214615	retained_intron		9	-1	21131188	1289
ENSMUSG00000073402	protein_coding	Gm8909	ENSMUST00000040467	protein_coding	principal2	17	-1	36168537	1357
ENSMUSG00000024290	protein_coding	Rock1	ENSMUST00000234734	protein_coding		18	-1	10181792	1989
ENSMUSG00000114534	processed_transcript	Gm32004	ENSMUST00000225322	lincRNA		13	-1	107565323	425
ENSMUSG00000032000	protein_coding	Birc3	ENSMUST00000013949	protein_coding	principal1	9	-1	7873024	2667
ENSMUSG00000040963	protein_coding	Asgr2	ENSMUST00000143772	protein_coding		11	1	70092683	865
ENSMUSG00000000420	protein_coding	Galnt1	ENSMUST00000164066	nonsense_mediated_decay		18	1	24246086	720
ENSMUSG00000024290	protein_coding	Rock1	ENSMUST00000235075	retained_intron		18	-1	10112378	2735
ENSMUSG00000114534	processed_transcript	Gm32004	ENSMUST00000224941	lincRNA		13	-1	107565329	441
ENSMUSG00000000420	protein_coding	Galnt1	ENSMUST00000169474	processed_transcript		18	1	24279995	818
ENSMUSG00000114534	processed_transcript	Gm32004	ENSMUST00000224033	lincRNA		13	-1	107565326	451
ENSMUSG00000000420	protein_coding	Galnt1	ENSMUST00000170191	processed_transcript		18	1	24280033	798
ENSMUSG00000040963	protein_coding	Asgr2	ENSMUST00000124721	protein_coding		11	1	70092748	808
ENSMUSG00000114534	processed_transcript	Gm32004	ENSMUST00000224949	retained_intron		13	-1	107565331	1918
ENSMUSG00000061474	protein_coding	Mrps36	ENSMUST00000076037	processed_transcript		13	-1	100744588	469
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000155265	retained_intron		9	-1	40306995	865
ENSMUSG00000020590	protein_coding	Snx13	ENSMUST00000163677	protein_coding		12	1	35047186	3681
ENSMUSG00000000420	protein_coding	Galnt1	ENSMUST00000178605	protein_coding	principal1	18	1	24232597	3796
ENSMUSG00000073402	protein_coding	Gm8909	ENSMUST00000174693	processed_transcript		17	-1	36167844	602
ENSMUSG00000101204	lincRNA	Gm29271	ENSMUST00000189943	lincRNA		Y	1	49509048	1499
ENSMUSG00000061474	protein_coding	Mrps36	ENSMUST00000125206	processed_transcript		13	-1	100744114	672
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000239052	protein_coding		9	-1	40320920	630
ENSMUSG00000105898	unprocessed_pseudogene	Obox4-ps32	ENSMUST00000196512	unprocessed_pseudogene		7	-1	15643208	537
ENSMUSG00000032000	protein_coding	Birc3	ENSMUST00000161642	nonsense_mediated_decay		9	-1	7860326	565
ENSMUSG00000040963	protein_coding	Asgr2	ENSMUST00000179757	retained_intron		11	1	70097692	672
ENSMUSG00000026459	protein_coding	Myog	ENSMUST00000027730	protein_coding	principal1	1	1	134289989	1495
ENSMUSG00000073402	protein_coding	Gm8909	ENSMUST00000173625	processed_transcript		17	-1	36167887	659
ENSMUSG00000106346	processed_pseudogene	Gtpbp4-ps6	ENSMUST00000198160	processed_pseudogene		7	-1	15653624	292
ENSMUSG00000032000	protein_coding	Birc3	ENSMUST00000115672	protein_coding		9	-1	7872983	2909
ENSMUSG00000032175	protein_coding	Tyk2	ENSMUST00000001036	protein_coding	principal2	9	-1	21127346	4619
ENSMUSG00000061474	protein_coding	Mrps36	ENSMUST00000150113	processed_transcript		13	-1	100744113	555
ENSMUSG00000093420	unprocessed_pseudogene	Obox4-ps33	ENSMUST00000176649	unprocessed_pseudogene		7	1	15691650	1139
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000150977	retained_intron		9	-1	40333528	412
ENSMUSG00000028789	protein_coding	Azin2	ENSMUST00000106068	protein_coding	principal1	4	-1	128962428	2049
ENSMUSG00000093683	unprocessed_pseudogene	Obox4-ps34	ENSMUST00000175879	unprocessed_pseudogene		7	1	15719663	520
ENSMUSG00000108786	processed_pseudogene	Gm8309	ENSMUST00000206627	processed_pseudogene		7	1	95461991	1448
ENSMUSG00000101204	lincRNA	Gm29271	ENSMUST00000185438	lincRNA		Y	1	49509501	438
ENSMUSG00000073402	protein_coding	Gm8909	ENSMUST00000097335	protein_coding	alternative2	17	-1	36168507	1182
ENSMUSG00000105314	processed_pseudogene	Ranbp2-ps11	ENSMUST00000197185	processed_pseudogene		7	-1	15726312	387
ENSMUSG00000101204	lincRNA	Gm29271	ENSMUST00000187018	lincRNA		Y	1	49509501	622
ENSMUSG00000108429	processed_pseudogene	Gm44603	ENSMUST00000206820	processed_pseudogene		7	1	95474946	367
ENSMUSG00000032000	protein_coding	Birc3	ENSMUST00000159323	protein_coding		9	-1	7873170	732
ENSMUSG00000034792	protein_coding	Gna15	ENSMUST00000147908	retained_intron		10	-1	81508173	1046
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000137189	processed_transcript		9	-1	40392450	437
ENSMUSG00000068407	protein_coding	Rnase12	ENSMUST00000227764	protein_coding	principal1	14	-1	51057661	673
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000153029	processed_transcript		9	-1	40392436	487
ENSMUSG00000036151	protein_coding	Tm6sf2	ENSMUST00000110160	protein_coding	alternative1	8	1	70072924	1446
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000115861	protein_coding	principal1	18	1	11633276	3523
ENSMUSG00000032000	protein_coding	Birc3	ENSMUST00000115673	protein_coding		9	-1	7873186	795
ENSMUSG00000031843	protein_coding	Mphosph6	ENSMUST00000213070	processed_transcript		8	-1	117793217	1573
ENSMUSG00000032000	protein_coding	Birc3	ENSMUST00000161099	processed_transcript		9	-1	7872857	360
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000148170	processed_transcript		9	-1	40465564	342
ENSMUSG00000068407	protein_coding	Rnase12	ENSMUST00000089798	protein_coding	principal1	14	-1	51057242	545
ENSMUSG00000020590	protein_coding	Snx13	ENSMUST00000048519	protein_coding	principal1	12	1	35047186	6231
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000129940	processed_transcript		9	-1	40465554	316
ENSMUSG00000032000	protein_coding	Birc3	ENSMUST00000159672	processed_transcript		9	-1	7872897	355
ENSMUSG00000040111	protein_coding	Gramd1b	ENSMUST00000165104	protein_coding	principal1	9	-1	40455670	3824
ENSMUSG00000028789	protein_coding	Azin2	ENSMUST00000030581	protein_coding	principal1	4	-1	128962439	2063
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000230203	protein_coding		15	1	41449027	4500
ENSMUSG00000050808	protein_coding	Muc15	ENSMUST00000111016	protein_coding	principal1	2	1	110721340	3421
ENSMUSG00000035932	protein_coding	Olfr750	ENSMUST00000216202	protein_coding	principal1	14	-1	51074435	5789
ENSMUSG00000000381	protein_coding	Wap	ENSMUST00000141868	processed_transcript		11	-1	6637466	905
ENSMUSG00000079681	protein_coding	Zglp1	ENSMUST00000115494	protein_coding	principal1	9	-1	21067093	1010
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000229769	protein_coding		15	1	41710604	1454
ENSMUSG00000035932	protein_coding	Olfr750	ENSMUST00000048478	protein_coding	principal1	14	-1	51071442	1132
ENSMUSG00000020590	protein_coding	Snx13	ENSMUST00000222101	retained_intron		12	1	35047217	1145
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000229511	protein_coding		15	1	41751698	457
ENSMUSG00000079681	protein_coding	Zglp1	ENSMUST00000216967	retained_intron		9	-1	21062795	401
ENSMUSG00000050808	protein_coding	Muc15	ENSMUST00000111017	protein_coding		2	1	110721611	3095
ENSMUSG00000036151	protein_coding	Tm6sf2	ENSMUST00000049197	protein_coding	principal3	8	1	70072932	1418
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000229836	protein_coding		15	1	41751701	359
ENSMUSG00000050808	protein_coding	Muc15	ENSMUST00000090332	protein_coding	principal1	2	1	110721648	1318
ENSMUSG00000087047	antisense	1700110K17Rik	ENSMUST00000140807	antisense		9	1	40323426	737
ENSMUSG00000049339	protein_coding	Retreg2	ENSMUST00000097694	protein_coding	principal3	1	1	75142786	2561
ENSMUSG00000036151	protein_coding	Tm6sf2	ENSMUST00000148015	retained_intron		8	1	70074281	484
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000170127	protein_coding		15	1	41788941	4346
ENSMUSG00000020590	protein_coding	Snx13	ENSMUST00000221876	processed_transcript		12	1	35085993	3676
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000235039	nonsense_mediated_decay		18	1	11633371	3360
ENSMUSG00000087047	antisense	1700110K17Rik	ENSMUST00000156511	antisense		9	1	40333474	927
ENSMUSG00000031843	protein_coding	Mphosph6	ENSMUST00000034303	protein_coding	principal1	8	-1	117801943	1068
ENSMUSG00000020590	protein_coding	Snx13	ENSMUST00000221870	processed_transcript		12	1	35086925	781
ENSMUSG00000003623	protein_coding	Crot	ENSMUST00000003720	protein_coding	principal1	5	-1	8997324	2996
ENSMUSG00000110928	TEC	Gm48114	ENSMUST00000214407	TEC		9	-1	40366902	3686
ENSMUSG00000111515	processed_pseudogene	Gm5055	ENSMUST00000215697	processed_pseudogene		9	1	40487720	581
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000234984	nonsense_mediated_decay		18	1	11657383	5471
ENSMUSG00000041138	protein_coding	Nme8	ENSMUST00000223466	nonsense_mediated_decay		13	-1	19675731	1175
ENSMUSG00000036151	protein_coding	Tm6sf2	ENSMUST00000149928	retained_intron		8	1	70075429	541
ENSMUSG00000024640	protein_coding	Psat1	ENSMUST00000025542	protein_coding	principal1	19	-1	15925059	2617
ENSMUSG00000028789	protein_coding	Azin2	ENSMUST00000128820	retained_intron		4	-1	128962439	1738
ENSMUSG00000084837	antisense	1700108N11Rik	ENSMUST00000153051	antisense		2	1	144331459	917
ENSMUSG00000049339	protein_coding	Retreg2	ENSMUST00000190240	protein_coding	alternative2	1	1	75142794	2438
ENSMUSG00000036151	protein_coding	Tm6sf2	ENSMUST00000124742	retained_intron		8	1	70077406	522
ENSMUSG00000028789	protein_coding	Azin2	ENSMUST00000147731	protein_coding		4	-1	128961398	701
ENSMUSG00000031843	protein_coding	Mphosph6	ENSMUST00000211818	retained_intron		8	-1	117801927	887
ENSMUSG00000028789	protein_coding	Azin2	ENSMUST00000143912	retained_intron		4	-1	128962442	1490
ENSMUSG00000049339	protein_coding	Retreg2	ENSMUST00000189650	protein_coding	alternative2	1	1	75142980	448
ENSMUSG00000108628	processed_pseudogene	Gm5037	ENSMUST00000205327	processed_pseudogene		7	-1	95913386	618
ENSMUSG00000041138	protein_coding	Nme8	ENSMUST00000221343	processed_transcript		13	-1	19689564	1325
ENSMUSG00000052554	protein_coding	Defb34	ENSMUST00000064475	protein_coding	principal1	8	1	19123752	246
ENSMUSG00000097205	lincRNA	Gm17540	ENSMUST00000181617	lincRNA		9	1	40531155	1528
ENSMUSG00000000381	protein_coding	Wap	ENSMUST00000102910	protein_coding	principal1	11	-1	6638637	551
ENSMUSG00000041138	protein_coding	Nme8	ENSMUST00000144820	processed_transcript		13	-1	19689611	1544
ENSMUSG00000024640	protein_coding	Psat1	ENSMUST00000162053	protein_coding		19	-1	15924622	2291
ENSMUSG00000028789	protein_coding	Azin2	ENSMUST00000156739	retained_intron		4	-1	128962428	1104
ENSMUSG00000003623	protein_coding	Crot	ENSMUST00000146115	processed_transcript		5	-1	8982144	1006
ENSMUSG00000044062	antisense	Plekhd1os	ENSMUST00000153297	antisense		12	-1	80692466	944
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000234184	retained_intron		18	1	11657408	3714
ENSMUSG00000111271	sense_intronic	Gm48127	ENSMUST00000217414	sense_intronic		9	-1	40342938	573
ENSMUSG00000049339	protein_coding	Retreg2	ENSMUST00000186037	protein_coding		1	1	75143165	2324
ENSMUSG00000085961	antisense	Gm15904	ENSMUST00000154515	antisense		4	1	128936005	487
ENSMUSG00000024640	protein_coding	Psat1	ENSMUST00000161707	retained_intron		19	-1	15909712	1572
ENSMUSG00000000381	protein_coding	Wap	ENSMUST00000127341	processed_transcript		11	-1	6637455	522
ENSMUSG00000024640	protein_coding	Psat1	ENSMUST00000162416	protein_coding		19	-1	15947337	588
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000234074	retained_intron		18	1	11657409	1904
ENSMUSG00000118117	lincRNA	Gm30961	ENSMUST00000237284	lincRNA		18	1	39636406	690
ENSMUSG00000034792	protein_coding	Gna15	ENSMUST00000043709	protein_coding	principal1	10	-1	81524225	1962
ENSMUSG00000049339	protein_coding	Retreg2	ENSMUST00000187901	protein_coding		1	1	75143182	399
ENSMUSG00000117570	lincRNA	Gm38410	ENSMUST00000234938	lincRNA		18	1	24339366	3156
ENSMUSG00000024640	protein_coding	Psat1	ENSMUST00000159264	processed_transcript		19	-1	15918337	438
ENSMUSG00000117922	lincRNA	Gm50397	ENSMUST00000235128	lincRNA		18	-1	39734959	672
ENSMUSG00000017144	protein_coding	Rnd3	ENSMUST00000017288	protein_coding	principal1	2	-1	51149111	2828
ENSMUSG00000049339	protein_coding	Retreg2	ENSMUST00000188977	retained_intron		1	1	75143378	285
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000047322	protein_coding	principal1	18	1	11657429	3209
ENSMUSG00000003623	protein_coding	Crot	ENSMUST00000157024	retained_intron		5	-1	8997042	2746
ENSMUSG00000117983	TEC	Gm50398	ENSMUST00000236724	TEC		18	1	39660877	2407
ENSMUSG00000024640	protein_coding	Psat1	ENSMUST00000160170	retained_intron		19	-1	15921409	553
ENSMUSG00000074794	protein_coding	Arrdc3	ENSMUST00000159690	nonsense_mediated_decay		13	1	80883410	4132
ENSMUSG00000049339	protein_coding	Retreg2	ENSMUST00000189345	protein_coding	alternative2	1	1	75145304	129
ENSMUSG00000024640	protein_coding	Psat1	ENSMUST00000162233	retained_intron		19	-1	15924930	564
ENSMUSG00000017144	protein_coding	Rnd3	ENSMUST00000154545	protein_coding		2	-1	51149110	2967
ENSMUSG00000102921	TEC	Gm37153	ENSMUST00000193637	TEC		5	1	8997159	231
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000234744	retained_intron		18	1	11657595	857
ENSMUSG00000086267	lincRNA	Gm12496	ENSMUST00000154377	lincRNA		4	-1	53404030	668
ENSMUSG00000034792	protein_coding	Gna15	ENSMUST00000150586	retained_intron		10	-1	81512639	661
ENSMUSG00000082828	processed_pseudogene	Gm16106	ENSMUST00000119187	processed_pseudogene		10	1	81504473	294
ENSMUSG00000017144	protein_coding	Rnd3	ENSMUST00000140864	retained_intron		2	-1	51149094	635
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000234499	protein_coding		18	1	11657842	586
ENSMUSG00000110641	protein_coding	Gm45826	ENSMUST00000212226	protein_coding	principal1	8	1	19140778	265
ENSMUSG00000101929	lincRNA	Gm28245	ENSMUST00000191551	lincRNA		Y	-1	26838863	1495
ENSMUSG00000111497	protein_coding	Gm38431	ENSMUST00000217359	nonsense_mediated_decay	principal5	9	-1	21091997	2988
ENSMUSG00000094706	protein_coding	Gm10338	ENSMUST00000096148	protein_coding	principal1	14	-1	7595592	984
ENSMUSG00000114807	lincRNA	Gm32090	ENSMUST00000224826	lincRNA		13	-1	107612849	1961
ENSMUSG00000094706	protein_coding	Gm10338	ENSMUST00000178623	protein_coding		14	-1	7595529	612
ENSMUSG00000111497	protein_coding	Gm38431	ENSMUST00000217282	nonsense_mediated_decay	alternative2	9	-1	21081352	4234
ENSMUSG00000110641	protein_coding	Gm45826	ENSMUST00000212965	nonsense_mediated_decay		8	1	19140812	695
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000234616	nonsense_mediated_decay		18	1	11660879	781
ENSMUSG00000007594	protein_coding	Hapln4	ENSMUST00000007738	protein_coding	principal1	8	1	70083457	3648
ENSMUSG00000101929	lincRNA	Gm28245	ENSMUST00000189796	lincRNA		Y	-1	26838411	619
ENSMUSG00000101929	lincRNA	Gm28245	ENSMUST00000189093	lincRNA		Y	-1	26838411	435
ENSMUSG00000102000	lincRNA	1700006H21Rik	ENSMUST00000188960	lincRNA		13	1	107687397	460
ENSMUSG00000114608	lincRNA	Gm36161	ENSMUST00000224554	lincRNA		13	1	120010390	1509
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000234161	retained_intron		18	1	11722221	679
ENSMUSG00000114871	processed_pseudogene	Gm21370	ENSMUST00000225422	processed_pseudogene		13	-1	120015972	709
ENSMUSG00000041238	protein_coding	Rbbp8	ENSMUST00000234766	retained_intron		18	1	11738500	1736
ENSMUSG00000101971	lincRNA	Gm28246	ENSMUST00000188308	lincRNA		Y	1	26871887	2167
ENSMUSG00000111692	protein_coding	Gm49373	ENSMUST00000213826	nonsense_mediated_decay	principal1	9	-1	21073096	1945
ENSMUSG00000101839	unprocessed_pseudogene	Gm28247	ENSMUST00000189329	unprocessed_pseudogene		Y	1	26881125	696
ENSMUSG00000007594	protein_coding	Hapln4	ENSMUST00000212006	processed_transcript		8	1	70083497	159
ENSMUSG00000114236	processed_pseudogene	Gm47876	ENSMUST00000224706	processed_pseudogene		14	1	7627888	499
ENSMUSG00000102000	lincRNA	1700006H21Rik	ENSMUST00000188490	lincRNA		13	1	107687397	627
ENSMUSG00000074794	protein_coding	Arrdc3	ENSMUST00000099356	protein_coding	principal1	13	1	80883410	4101
ENSMUSG00000007594	protein_coding	Hapln4	ENSMUST00000213092	retained_intron		8	1	70084144	503
ENSMUSG00000102010	unprocessed_pseudogene	Gm28248	ENSMUST00000186093	unprocessed_pseudogene		Y	1	26918028	615
ENSMUSG00000079842	protein_coding	Spag11a	ENSMUST00000058955	protein_coding	principal1	8	1	19157886	436
ENSMUSG00000095029	protein_coding	Gm36079	ENSMUST00000177659	protein_coding	principal1	13	-1	120027011	573
ENSMUSG00000101967	lincRNA	Gm29555	ENSMUST00000188620	lincRNA		Y	1	55373936	1497
ENSMUSG00000084923	lincRNA	Gm15611	ENSMUST00000146928	lincRNA		5	-1	8999669	406
ENSMUSG00000114430	lincRNA	Gm40264	ENSMUST00000226082	lincRNA		5	1	9034780	1365
ENSMUSG00000114430	lincRNA	Gm40264	ENSMUST00000225021	lincRNA		5	1	9034881	2663
ENSMUSG00000114430	lincRNA	Gm40264	ENSMUST00000224996	lincRNA		5	1	9035124	118
ENSMUSG00000074794	protein_coding	Arrdc3	ENSMUST00000161441	protein_coding		13	1	80886095	1908
ENSMUSG00000101967	lincRNA	Gm29555	ENSMUST00000190886	lincRNA		Y	1	55374388	617
ENSMUSG00000101149	unprocessed_pseudogene	Gm20892	ENSMUST00000190755	unprocessed_pseudogene		Y	1	26947544	696
ENSMUSG00000101967	lincRNA	Gm29555	ENSMUST00000191314	lincRNA		Y	1	55374388	433
ENSMUSG00000074794	protein_coding	Arrdc3	ENSMUST00000159856	retained_intron		13	1	80890104	543
ENSMUSG00000074366	protein_coding	Obox5	ENSMUST00000173455	protein_coding		7	1	15750131	866
ENSMUSG00000082154	processed_pseudogene	Gm16464	ENSMUST00000117815	processed_pseudogene		7	-1	104502149	1095
ENSMUSG00000102035	unprocessed_pseudogene	Gm21733	ENSMUST00000185670	unprocessed_pseudogene		Y	-1	55483986	696
ENSMUSG00000059463	protein_coding	Spag11b	ENSMUST00000110767	protein_coding		8	1	19140759	1740
ENSMUSG00000074794	protein_coding	Arrdc3	ENSMUST00000162904	retained_intron		13	1	80890518	591
ENSMUSG00000098195	processed_pseudogene	Gm7693	ENSMUST00000183257	processed_pseudogene		7	-1	72713621	988
ENSMUSG00000020411	protein_coding	Nipal4	ENSMUST00000020679	protein_coding	principal1	11	-1	46166508	3444
ENSMUSG00000037926	protein_coding	Ssh2	ENSMUST00000156488	protein_coding		11	1	77216287	458
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000230778	protein_coding		15	1	41789381	2818
ENSMUSG00000074366	protein_coding	Obox5	ENSMUST00000098802	protein_coding	principal1	7	1	15750377	1831
ENSMUSG00000116386	processed_pseudogene	Gm49538	ENSMUST00000229197	processed_pseudogene		16	1	15587365	695
ENSMUSG00000059463	protein_coding	Spag11b	ENSMUST00000039075	protein_coding	principal1	8	1	19140798	342
ENSMUSG00000039197	protein_coding	Adk	ENSMUST00000045376	protein_coding	principal2	14	1	21052574	1782
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000105345	protein_coding	principal3	10	-1	80433647	2950
ENSMUSG00000006356	protein_coding	Crip2	ENSMUST00000084882	protein_coding	principal1	12	1	113140236	1439
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000022918	protein_coding		15	1	41789515	4239
ENSMUSG00000107422	lincRNA	Gm44129	ENSMUST00000203511	lincRNA		6	1	12608996	675
ENSMUSG00000074366	protein_coding	Obox5	ENSMUST00000173053	protein_coding		7	1	15750381	680
ENSMUSG00000118365	antisense	Gm41724	ENSMUST00000235622	antisense		18	1	52528661	549
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000090095	protein_coding		15	1	41789515	4158
ENSMUSG00000039197	protein_coding	Adk	ENSMUST00000223558	processed_transcript		14	1	21052611	289
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000119694	protein_coding	principal1	19	1	4855130	1980
ENSMUSG00000047379	protein_coding	B4gat1	ENSMUST00000053705	protein_coding	principal1	19	1	5038826	2032
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000141704	nonsense_mediated_decay		7	1	35397035	2825
ENSMUSG00000039197	protein_coding	Adk	ENSMUST00000223861	retained_intron		14	1	21052611	4243
ENSMUSG00000006356	protein_coding	Crip2	ENSMUST00000200380	protein_coding		12	1	113140572	864
ENSMUSG00000047379	protein_coding	B4gat1	ENSMUST00000235776	protein_coding		19	1	5038907	2224
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000237755	retained_intron		19	1	4855162	1688
ENSMUSG00000006356	protein_coding	Crip2	ENSMUST00000196015	protein_coding		12	1	113142808	772
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000237504	protein_coding		19	1	4855186	460
ENSMUSG00000039197	protein_coding	Adk	ENSMUST00000225742	retained_intron		14	1	21052617	2224
ENSMUSG00000039197	protein_coding	Adk	ENSMUST00000223641	processed_transcript		14	1	21052627	147
ENSMUSG00000022674	protein_coding	Ube2v2	ENSMUST00000229859	nonsense_mediated_decay		16	-1	15595773	1042
ENSMUSG00000039197	protein_coding	Adk	ENSMUST00000223915	protein_coding		14	1	21052645	617
ENSMUSG00000006356	protein_coding	Crip2	ENSMUST00000197396	retained_intron		12	1	113143335	647
ENSMUSG00000039197	protein_coding	Adk	ENSMUST00000224899	protein_coding		14	1	21053959	392
ENSMUSG00000006356	protein_coding	Crip2	ENSMUST00000199976	retained_intron		12	1	113143470	359
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000166917	protein_coding	principal1	15	1	41830932	798
ENSMUSG00000030713	protein_coding	Klk7	ENSMUST00000032955	protein_coding	principal1	7	1	43811294	1895
ENSMUSG00000006356	protein_coding	Crip2	ENSMUST00000200177	retained_intron		12	1	113144086	445
ENSMUSG00000039197	protein_coding	Adk	ENSMUST00000224069	protein_coding	alternative1	14	1	21076152	1818
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000230127	protein_coding		15	1	41830957	451
ENSMUSG00000039197	protein_coding	Adk	ENSMUST00000223645	protein_coding		14	1	21318125	261
ENSMUSG00000030094	protein_coding	Xpc	ENSMUST00000032182	protein_coding	principal1	6	-1	91515888	3634
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000079414	protein_coding	principal1	7	1	35397055	2610
ENSMUSG00000039197	protein_coding	Adk	ENSMUST00000224974	processed_transcript		14	1	21369070	633
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000230131	protein_coding		15	1	41830958	702
ENSMUSG00000037279	protein_coding	Ovol2	ENSMUST00000103171	protein_coding	alternative2	2	-1	144331695	1547
ENSMUSG00000030094	protein_coding	Xpc	ENSMUST00000150279	nonsense_mediated_decay		6	-1	91515795	4347
ENSMUSG00000024811	protein_coding	Tnks2	ENSMUST00000025729	protein_coding	principal1	19	1	36834232	6481
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000231215	nonsense_mediated_decay		15	1	41830993	408
ENSMUSG00000030094	protein_coding	Xpc	ENSMUST00000206476	protein_coding		6	-1	91515884	330
ENSMUSG00000026283	protein_coding	Ing5	ENSMUST00000027505	protein_coding	principal1	1	1	93803965	4533
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000230126	retained_intron		15	1	41850224	684
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000237784	retained_intron		19	1	4855221	2093
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000125041	retained_intron		7	1	35397107	1990
ENSMUSG00000037279	protein_coding	Ovol2	ENSMUST00000037423	protein_coding	principal4	2	-1	144332146	1539
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000237011	protein_coding		19	1	4855253	401
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000129064	processed_transcript		7	1	35397116	369
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000236406	retained_intron		19	1	4855709	794
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000206854	nonsense_mediated_decay		7	1	35397130	600
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000235464	retained_intron		19	1	4855760	692
ENSMUSG00000037279	protein_coding	Ovol2	ENSMUST00000138582	processed_transcript		2	-1	144331326	547
ENSMUSG00000026283	protein_coding	Ing5	ENSMUST00000188402	nonsense_mediated_decay		1	1	93803983	4538
ENSMUSG00000092374	processed_pseudogene	Gm6623	ENSMUST00000173570	processed_pseudogene		17	1	36179114	544
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000237401	retained_intron		19	1	4856246	672
ENSMUSG00000097785	processed_transcript	B230217O12Rik	ENSMUST00000235159	lincRNA		19	-1	57360739	1197
ENSMUSG00000024811	protein_coding	Tnks2	ENSMUST00000168656	processed_transcript		19	1	36834404	1078
ENSMUSG00000026283	protein_coding	Ing5	ENSMUST00000190476	protein_coding		1	1	93804345	918
ENSMUSG00000024811	protein_coding	Tnks2	ENSMUST00000168973	retained_intron		19	1	36849371	344
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000235931	retained_intron		19	1	4858283	1235
ENSMUSG00000097785	processed_transcript	B230217O12Rik	ENSMUST00000181921	bidirectional_promoter_lncRNA		19	-1	57360775	1642
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000235264	processed_transcript		19	1	4859293	727
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000238118	retained_intron		19	1	4859381	608
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000155137	processed_transcript		7	1	35416328	401
ENSMUSG00000117670	lincRNA	Gm50270	ENSMUST00000235809	lincRNA		19	1	57323602	1655
ENSMUSG00000083282	protein_coding	Ctsf	ENSMUST00000235354	retained_intron		19	1	4859897	491
ENSMUSG00000024811	protein_coding	Tnks2	ENSMUST00000167533	retained_intron		19	1	36857498	740
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000152020	retained_intron		7	1	35416420	813
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000102889	protein_coding	principal1	4	-1	58912749	7045
ENSMUSG00000080268	protein_coding	Brms1	ENSMUST00000116567	protein_coding	principal1	19	1	5041354	1388
ENSMUSG00000024811	protein_coding	Tnks2	ENSMUST00000167724	protein_coding		19	1	36857881	670
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000206230	nonsense_mediated_decay		7	1	35417788	547
ENSMUSG00000069633	protein_coding	Pex11g	ENSMUST00000004686	protein_coding	principal1	8	-1	3467680	2870
ENSMUSG00000024811	protein_coding	Tnks2	ENSMUST00000168718	protein_coding		19	1	36859094	606
ENSMUSG00000024811	protein_coding	Tnks2	ENSMUST00000164665	protein_coding		19	1	36871751	982
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000149513	processed_transcript		4	-1	58811842	526
ENSMUSG00000024811	protein_coding	Tnks2	ENSMUST00000166677	retained_intron		19	1	36878507	3491
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000179393	protein_coding		15	1	41449027	4498
ENSMUSG00000022674	protein_coding	Ube2v2	ENSMUST00000115777	protein_coding	principal1	16	-1	15594524	4207
ENSMUSG00000024811	protein_coding	Tnks2	ENSMUST00000168654	retained_intron		19	1	36880573	622
ENSMUSG00000061815	protein_coding	Rufy4	ENSMUST00000080167	protein_coding		1	1	74125541	2306
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000148166	processed_transcript		7	1	35418289	808
ENSMUSG00000069633	protein_coding	Pex11g	ENSMUST00000111081	protein_coding		8	-1	3467645	666
ENSMUSG00000022307	protein_coding	Oxr1	ENSMUST00000090096	protein_coding		15	1	41447482	4515
ENSMUSG00000097694	lincRNA	G730013B05Rik	ENSMUST00000231801	lincRNA		16	1	50526245	670
ENSMUSG00000096844	IG_V_gene	Igkv6-14	ENSMUST00000103394	IG_V_gene	principal1	6	-1	70435476	347
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000140418	retained_intron		7	1	35427232	916
ENSMUSG00000069633	protein_coding	Pex11g	ENSMUST00000118194	processed_transcript		8	-1	3467670	994
ENSMUSG00000097694	lincRNA	G730013B05Rik	ENSMUST00000180509	lincRNA		16	1	50526304	2750
ENSMUSG00000108955	TEC	Gm44775	ENSMUST00000207266	TEC		8	1	3458039	1456
ENSMUSG00000097232	antisense	Gm26854	ENSMUST00000180418	antisense		15	-1	41788911	705
ENSMUSG00000023072	protein_coding	Cep89	ENSMUST00000150421	protein_coding		7	1	35428322	712
ENSMUSG00000097694	lincRNA	G730013B05Rik	ENSMUST00000181884	lincRNA		16	1	50528502	1955
ENSMUSG00000057596	protein_coding	Trim30d	ENSMUST00000071069	protein_coding		7	-1	104507849	3282
ENSMUSG00000112209	processed_pseudogene	Gm18730	ENSMUST00000218038	processed_pseudogene		10	1	121400713	343
ENSMUSG00000114774	lincRNA	Gm35281	ENSMUST00000223943	lincRNA		14	-1	29788765	586
ENSMUSG00000039632	protein_coding	Ccdc151	ENSMUST00000115336	protein_coding	alternative2	9	-1	22002537	2103
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000149301	protein_coding		4	-1	58911930	4615
ENSMUSG00000114774	lincRNA	Gm35281	ENSMUST00000223916	lincRNA		14	-1	29852344	688
ENSMUSG00000114774	lincRNA	Gm35281	ENSMUST00000224736	lincRNA		14	-1	29852408	253
ENSMUSG00000080268	protein_coding	Brms1	ENSMUST00000236320	processed_transcript		19	1	5041387	787
ENSMUSG00000080268	protein_coding	Brms1	ENSMUST00000235918	protein_coding		19	1	5041399	470
ENSMUSG00000114606	transcribed_processed_pseudogene	Gm7633	ENSMUST00000225864	transcribed_processed_pseudogene		14	1	29902950	563
ENSMUSG00000022674	protein_coding	Ube2v2	ENSMUST00000115776	protein_coding		16	-1	15594507	1236
ENSMUSG00000030201	protein_coding	Lrp6	ENSMUST00000032322	protein_coding	principal1	6	-1	134566913	9368
ENSMUSG00000114606	transcribed_processed_pseudogene	Gm7633	ENSMUST00000223966	processed_transcript		14	1	29903768	3320
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000131611	processed_transcript		4	-1	58819601	639
ENSMUSG00000080268	protein_coding	Brms1	ENSMUST00000236707	retained_intron		19	1	5041404	787
ENSMUSG00000020409	protein_coding	Slu7	ENSMUST00000151880	protein_coding		11	1	43433744	1662
ENSMUSG00000039632	protein_coding	Ccdc151	ENSMUST00000044926	protein_coding	principal3	9	-1	22002634	2197
ENSMUSG00000080268	protein_coding	Brms1	ENSMUST00000237117	retained_intron		19	1	5046121	826
ENSMUSG00000002341	protein_coding	Ncan	ENSMUST00000002412	protein_coding	principal1	8	-1	70120873	7195
ENSMUSG00000022674	protein_coding	Ube2v2	ENSMUST00000118236	protein_coding		16	-1	15594472	893
ENSMUSG00000057596	protein_coding	Trim30d	ENSMUST00000033211	protein_coding	principal1	7	-1	104507825	1904
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000135601	processed_transcript		4	-1	58834064	2046
ENSMUSG00000022674	protein_coding	Ube2v2	ENSMUST00000096234	protein_coding		16	-1	15594490	609
ENSMUSG00000022674	protein_coding	Ube2v2	ENSMUST00000229244	retained_intron		16	-1	15594490	2469
ENSMUSG00000039632	protein_coding	Ccdc151	ENSMUST00000214420	retained_intron		9	-1	22002634	903
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000107557	protein_coding		4	-1	58911927	4946
ENSMUSG00000061815	protein_coding	Rufy4	ENSMUST00000127134	protein_coding	principal1	1	1	74125579	1841
ENSMUSG00000105892	processed_pseudogene	Gm35013	ENSMUST00000197218	processed_pseudogene		3	1	90758732	832
ENSMUSG00000057596	protein_coding	Trim30d	ENSMUST00000141063	protein_coding		7	-1	104483426	635
ENSMUSG00000030201	protein_coding	Lrp6	ENSMUST00000111950	retained_intron		6	-1	134471293	2756
ENSMUSG00000117789	protein_coding	Gm50388	ENSMUST00000236560	nonsense_mediated_decay	principal1	19	1	5038891	3572
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000142102	processed_transcript		4	-1	58834913	690
ENSMUSG00000098035	processed_pseudogene	Gm5335	ENSMUST00000182995	processed_pseudogene		7	-1	72990153	1000
ENSMUSG00000030201	protein_coding	Lrp6	ENSMUST00000203016	retained_intron		6	-1	134465008	3246
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000085679	protein_coding	principal2	5	1	145114215	3105
ENSMUSG00000101228	unprocessed_pseudogene	Gm21330	ENSMUST00000186881	unprocessed_pseudogene		Y	-1	55558343	696
ENSMUSG00000096621	protein_coding	Gm5849	ENSMUST00000180151	protein_coding	principal1	3	-1	90777880	482
ENSMUSG00000030201	protein_coding	Lrp6	ENSMUST00000203773	retained_intron		6	-1	134467761	727
ENSMUSG00000051232	protein_coding	Tmem199	ENSMUST00000052566	protein_coding	principal1	11	-1	78512172	1347
ENSMUSG00000106174	unprocessed_pseudogene	Gm43235	ENSMUST00000200121	unprocessed_pseudogene		3	-1	90848254	297
ENSMUSG00000101723	lincRNA	Gm28355	ENSMUST00000187443	lincRNA		Y	1	55574640	356
ENSMUSG00000081276	processed_pseudogene	Gm13132	ENSMUST00000121194	processed_pseudogene		4	1	154220541	472
ENSMUSG00000102056	unprocessed_pseudogene	Gm28354	ENSMUST00000190904	unprocessed_pseudogene		Y	-1	55587961	678
ENSMUSG00000106257	unprocessed_pseudogene	Gm9023	ENSMUST00000198408	unprocessed_pseudogene		3	-1	91017184	1038
ENSMUSG00000030201	protein_coding	Lrp6	ENSMUST00000126836	protein_coding		6	-1	134566965	722
ENSMUSG00000037926	protein_coding	Ssh2	ENSMUST00000037912	protein_coding	principal3	11	1	77216287	9178
ENSMUSG00000105919	processed_pseudogene	Gm7166	ENSMUST00000199715	processed_pseudogene		3	1	91039573	303
ENSMUSG00000100052	unprocessed_pseudogene	Gm28353	ENSMUST00000186482	unprocessed_pseudogene		Y	-1	55624945	570
ENSMUSG00000085636	processed_transcript	Gm11769	ENSMUST00000140273	processed_transcript		11	1	120150562	1657
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000151869	processed_transcript		4	-1	58844881	1384
ENSMUSG00000059205	protein_coding	Olfr1130	ENSMUST00000213103	protein_coding	principal1	2	1	87606212	2643
ENSMUSG00000099442	lincRNA	Gm28352	ENSMUST00000186654	lincRNA		Y	-1	55634171	2167
ENSMUSG00000083394	processed_pseudogene	Gm11703	ENSMUST00000118352	processed_pseudogene		11	-1	115724808	483
ENSMUSG00000030201	protein_coding	Lrp6	ENSMUST00000203235	retained_intron		6	-1	134541714	941
ENSMUSG00000020409	protein_coding	Slu7	ENSMUST00000020681	protein_coding	principal1	11	1	43433759	3625
ENSMUSG00000059205	protein_coding	Olfr1130	ENSMUST00000216580	protein_coding	principal1	2	1	87606256	2648
ENSMUSG00000084130	processed_pseudogene	Gm11704	ENSMUST00000120031	processed_pseudogene		11	1	115729466	214
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000144512	protein_coding		4	-1	58912704	1925
ENSMUSG00000092387	unprocessed_pseudogene	Gm7648	ENSMUST00000173036	unprocessed_pseudogene		7	-1	7596549	1658
ENSMUSG00000037926	protein_coding	Ssh2	ENSMUST00000180394	retained_intron		11	1	77346743	3446
ENSMUSG00000051232	protein_coding	Tmem199	ENSMUST00000132433	retained_intron		11	-1	78508818	1054
ENSMUSG00000112350	lincRNA	Gm47697	ENSMUST00000218454	lincRNA		10	1	81525411	374
ENSMUSG00000032625	protein_coding	Thsd7a	ENSMUST00000119581	protein_coding	principal2	6	-1	12749410	5678
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000055822	protein_coding		4	-1	58912749	1478
ENSMUSG00000050812	protein_coding	Ecpas	ENSMUST00000134848	protein_coding		4	-1	58911902	739
ENSMUSG00000020409	protein_coding	Slu7	ENSMUST00000149402	processed_transcript		11	1	43437375	580
ENSMUSG00000020271	protein_coding	Fbxw11	ENSMUST00000109366	protein_coding	alternative1	11	1	32642724	3821
ENSMUSG00000111435	lincRNA	Gm47358	ENSMUST00000217622	lincRNA		10	1	85707680	3118
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000105342	protein_coding	alternative2	10	-1	80433643	2928
ENSMUSG00000051232	protein_coding	Tmem199	ENSMUST00000135946	retained_intron		11	-1	78512045	501
ENSMUSG00000032625	protein_coding	Thsd7a	ENSMUST00000137836	retained_intron		6	-1	12318329	541
ENSMUSG00000111609	processed_pseudogene	Gm6713	ENSMUST00000216137	processed_pseudogene		10	-1	85710772	1446
ENSMUSG00000020409	protein_coding	Slu7	ENSMUST00000136541	processed_transcript		11	1	43441407	430
ENSMUSG00000037926	protein_coding	Ssh2	ENSMUST00000127890	processed_transcript		11	1	77348280	1591
ENSMUSG00000029440	protein_coding	Psmd9	ENSMUST00000199260	processed_transcript		5	1	123169413	406
ENSMUSG00000025738	protein_coding	Fbxl16	ENSMUST00000045692	protein_coding	principal1	17	1	25809085	3489
ENSMUSG00000020409	protein_coding	Slu7	ENSMUST00000178622	protein_coding	principal1	11	1	43437343	3566
ENSMUSG00000020271	protein_coding	Fbxw11	ENSMUST00000093205	protein_coding	alternative1	11	1	32642866	3938
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000105343	protein_coding	alternative2	10	-1	80433647	2920
ENSMUSG00000051232	protein_coding	Tmem199	ENSMUST00000148393	retained_intron		11	-1	78512083	562
ENSMUSG00000114715	lincRNA	Gm34471	ENSMUST00000225395	lincRNA		13	-1	113567767	2540
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000129033	processed_transcript		5	1	145114258	431
ENSMUSG00000020271	protein_coding	Fbxw11	ENSMUST00000143290	nonsense_mediated_decay		11	1	32642904	620
ENSMUSG00000029440	protein_coding	Psmd9	ENSMUST00000133386	processed_transcript		5	1	123228190	2634
ENSMUSG00000037926	protein_coding	Ssh2	ENSMUST00000181283	protein_coding	alternative2	11	1	77348282	4475
ENSMUSG00000025738	protein_coding	Fbxl16	ENSMUST00000236165	protein_coding	principal1	17	1	25816319	2757
ENSMUSG00000020271	protein_coding	Fbxw11	ENSMUST00000137898	processed_transcript		11	1	32642784	309
ENSMUSG00000068819	protein_coding	Olfr1131	ENSMUST00000216756	protein_coding		2	1	87627104	1459
ENSMUSG00000025738	protein_coding	Fbxl16	ENSMUST00000235694	protein_coding		17	1	25818059	387
ENSMUSG00000068819	protein_coding	Olfr1131	ENSMUST00000213302	protein_coding	principal1	2	1	87627119	1779
ENSMUSG00000106940	TEC	Gm42930	ENSMUST00000200872	TEC		5	-1	121184996	3260
ENSMUSG00000109455	antisense	Gm44710	ENSMUST00000208885	antisense		7	1	28378980	471
ENSMUSG00000095135	protein_coding	Gm21858	ENSMUST00000185713	protein_coding	principal1	Y	1	55731756	923
ENSMUSG00000068819	protein_coding	Olfr1131	ENSMUST00000090712	protein_coding	principal1	2	1	87628465	930
ENSMUSG00000037926	protein_coding	Ssh2	ENSMUST00000180554	retained_intron		11	1	77348288	3482
ENSMUSG00000095135	protein_coding	Gm21858	ENSMUST00000177834	protein_coding		Y	1	55733188	498
ENSMUSG00000020271	protein_coding	Fbxw11	ENSMUST00000076383	protein_coding	principal3	11	1	32642875	4019
ENSMUSG00000037926	protein_coding	Ssh2	ENSMUST00000180545	retained_intron		11	1	77391437	2567
ENSMUSG00000112451	processed_pseudogene	Gm6714	ENSMUST00000218677	processed_pseudogene		10	-1	85733068	2330
ENSMUSG00000041138	protein_coding	Nme8	ENSMUST00000039340	protein_coding		13	-1	19697760	1704
ENSMUSG00000117350	processed_transcript	Gm49975	ENSMUST00000234007	retained_intron		18	1	47154189	1998
ENSMUSG00000050685	protein_coding	Ccdc54	ENSMUST00000062439	protein_coding	principal1	16	-1	50591154	1298
ENSMUSG00000083899	transcribed_processed_pseudogene	Gm12346	ENSMUST00000121455	transcribed_processed_pseudogene		11	1	77293444	2255
ENSMUSG00000112479	processed_pseudogene	Gm21026	ENSMUST00000218628	processed_pseudogene		10	-1	85732099	1345
ENSMUSG00000117350	processed_transcript	Gm49975	ENSMUST00000234752	lincRNA		18	1	47154214	565
ENSMUSG00000117621	protein_coding	Hspe1-rs1	ENSMUST00000234633	protein_coding	principal1	18	1	47112139	515
ENSMUSG00000117377	processed_pseudogene	Gm8468	ENSMUST00000234636	processed_pseudogene		18	1	47116552	823
ENSMUSG00000116848	antisense	4930542D17Rik	ENSMUST00000231324	antisense		16	1	50590503	1362
ENSMUSG00000051732	protein_coding	Pabpc2	ENSMUST00000063219	protein_coding	principal1	18	1	39773497	2586
ENSMUSG00000032625	protein_coding	Thsd7a	ENSMUST00000122369	processed_transcript		6	-1	12419361	3337
ENSMUSG00000083692	processed_pseudogene	Gm9575	ENSMUST00000122140	processed_pseudogene		16	-1	50666346	1339
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000126343	retained_intron		5	1	145114301	916
ENSMUSG00000032625	protein_coding	Thsd7a	ENSMUST00000135450	retained_intron		6	-1	12324693	496
ENSMUSG00000118015	lincRNA	Gm41708	ENSMUST00000237624	lincRNA		18	-1	39929374	852
ENSMUSG00000041138	protein_coding	Nme8	ENSMUST00000091763	protein_coding	principal1	13	-1	19697794	2122
ENSMUSG00000003444	protein_coding	Med29	ENSMUST00000003536	protein_coding	principal1	7	-1	28392708	1281
ENSMUSG00000118042	lincRNA	Gm50395	ENSMUST00000235427	lincRNA		18	-1	40109733	1177
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000196111	protein_coding	alternative1	5	1	145114312	1394
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000141602	protein_coding		5	1	145114316	295
ENSMUSG00000041138	protein_coding	Nme8	ENSMUST00000223286	processed_transcript		13	-1	19697757	1738
ENSMUSG00000098054	processed_pseudogene	Gm8192	ENSMUST00000182196	processed_pseudogene		11	-1	32775639	958
ENSMUSG00000117838	lincRNA	Gm50396	ENSMUST00000237035	lincRNA		18	1	40181585	618
ENSMUSG00000026180	protein_coding	Cxcr2	ENSMUST00000106899	protein_coding	principal1	1	1	74153991	3046
ENSMUSG00000027399	protein_coding	Il1a	ENSMUST00000028882	protein_coding	principal1	2	-1	129309972	1974
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000136074	protein_coding		5	1	145123679	696
ENSMUSG00000073609	protein_coding	D2hgdh	ENSMUST00000187321	protein_coding		1	1	93824909	317
ENSMUSG00000021448	protein_coding	Shc3	ENSMUST00000239056	protein_coding	alternative2	13	-1	51569487	3940
ENSMUSG00000032625	protein_coding	Thsd7a	ENSMUST00000119443	processed_transcript		6	-1	12555113	3194
ENSMUSG00000066438	protein_coding	Plekhd1	ENSMUST00000140770	protein_coding	principal1	12	1	80692591	3535
ENSMUSG00000085676	lincRNA	4930555O08Rik	ENSMUST00000122821	lincRNA		11	-1	32790725	668
ENSMUSG00000093637	antisense	Gm20636	ENSMUST00000176660	antisense		5	-1	112377639	707
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000138235	retained_intron		5	1	145123974	850
ENSMUSG00000021448	protein_coding	Shc3	ENSMUST00000223543	protein_coding		13	-1	51569487	3644
ENSMUSG00000105368	TEC	Gm43759	ENSMUST00000196925	TEC		5	1	112367212	1261
ENSMUSG00000032625	protein_coding	Thsd7a	ENSMUST00000172356	protein_coding	alternative2	6	-1	12749253	10998
ENSMUSG00000026180	protein_coding	Cxcr2	ENSMUST00000027372	protein_coding	principal1	1	1	74153989	2220
ENSMUSG00000021448	protein_coding	Shc3	ENSMUST00000221850	retained_intron		13	-1	51569419	3163
ENSMUSG00000028969	protein_coding	Cdk5	ENSMUST00000030814	protein_coding	principal1	5	-1	24423530	2059
ENSMUSG00000110542	lincRNA	Gm39139	ENSMUST00000212619	lincRNA		8	-1	19164808	542
ENSMUSG00000083794	processed_pseudogene	Gm16123	ENSMUST00000118647	processed_pseudogene		6	1	12565518	1517
ENSMUSG00000110542	lincRNA	Gm39139	ENSMUST00000212621	lincRNA		8	-1	19188015	5878
ENSMUSG00000066438	protein_coding	Plekhd1	ENSMUST00000152465	processed_transcript		12	1	80706846	428
ENSMUSG00000021448	protein_coding	Shc3	ENSMUST00000021898	protein_coding	principal2	13	-1	51567084	1537
ENSMUSG00000028969	protein_coding	Cdk5	ENSMUST00000198990	protein_coding		5	-1	24423485	783
ENSMUSG00000024529	protein_coding	Lox	ENSMUST00000025409	protein_coding	principal1	18	-1	52529674	4741
ENSMUSG00000028969	protein_coding	Cdk5	ENSMUST00000197619	retained_intron		5	-1	24422695	327
ENSMUSG00000044786	protein_coding	Zfp36	ENSMUST00000051241	protein_coding	principal2	7	-1	28380253	2790
ENSMUSG00000104643	processed_pseudogene	Gm8862	ENSMUST00000198379	processed_pseudogene		6	1	70437111	1346
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000138900	processed_transcript		5	1	145123974	914
ENSMUSG00000066438	protein_coding	Plekhd1	ENSMUST00000142760	nonsense_mediated_decay		12	1	80720757	451
ENSMUSG00000102802	protein_coding	Mgam2-ps	ENSMUST00000216691	processed_transcript		6	1	40778711	1709
ENSMUSG00000102802	protein_coding	Mgam2-ps	ENSMUST00000215813	processed_transcript		6	1	40786939	1921
ENSMUSG00000099423	processed_pseudogene	Gm17826	ENSMUST00000189720	processed_pseudogene		7	1	16498732	798
ENSMUSG00000085498	processed_transcript	Gm14023	ENSMUST00000144178	processed_transcript		2	1	129297370	1781
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000128229	retained_intron		5	1	145125891	680
ENSMUSG00000076594	IG_V_gene	Igkv6-13	ENSMUST00000198184	IG_V_gene		6	-1	70458036	359
ENSMUSG00000066438	protein_coding	Plekhd1	ENSMUST00000153762	retained_intron		12	1	80721732	956
ENSMUSG00000076594	IG_V_gene	Igkv6-13	ENSMUST00000103395	IG_V_gene	principal1	6	-1	70457787	287
ENSMUSG00000044786	protein_coding	Zfp36	ENSMUST00000209061	protein_coding	alternative2	7	-1	28379255	2465
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000138922	protein_coding		5	1	145126758	525
ENSMUSG00000100583	antisense	Gm29443	ENSMUST00000190297	antisense		7	1	16613824	410
ENSMUSG00000102802	protein_coding	Mgam2-ps	ENSMUST00000195870	protein_coding	principal1	6	1	40786941	7140
ENSMUSG00000029622	protein_coding	Arpc1b	ENSMUST00000144375	retained_intron		5	1	145127223	772
ENSMUSG00000100583	antisense	Gm29443	ENSMUST00000186708	antisense		7	1	16614040	407
ENSMUSG00000111034	lincRNA	Gm48066	ENSMUST00000217458	lincRNA		10	1	44647518	663
ENSMUSG00000101135	processed_pseudogene	Gm17981	ENSMUST00000191109	processed_pseudogene		7	-1	16515138	739
ENSMUSG00000111535	lincRNA	Gm35154	ENSMUST00000217008	lincRNA		10	1	44598720	1093
ENSMUSG00000111535	lincRNA	Gm35154	ENSMUST00000214824	lincRNA		10	1	44599867	810
ENSMUSG00000111116	lincRNA	Gm48065	ENSMUST00000216739	lincRNA		10	-1	44602174	4129
ENSMUSG00000046354	protein_coding	Defb14	ENSMUST00000052601	protein_coding	principal1	8	1	19194357	204
ENSMUSG00000024529	protein_coding	Lox	ENSMUST00000171470	protein_coding	principal1	18	-1	52529867	4468
ENSMUSG00000036120	protein_coding	Rfxank	ENSMUST00000211970	retained_intron		8	-1	70135628	3282
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000105346	protein_coding	alternative2	10	-1	80433621	2839
ENSMUSG00000030344	protein_coding	Akap3	ENSMUST00000095440	protein_coding	principal1	6	1	126853098	3153
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000020377	protein_coding	alternative2	10	-1	80433621	2842
ENSMUSG00000033478	protein_coding	Fam160b1	ENSMUST00000036407	protein_coding	principal1	19	1	57360680	5951
ENSMUSG00000030344	protein_coding	Akap3	ENSMUST00000202878	protein_coding	principal1	6	1	126853144	3023
ENSMUSG00000046886	protein_coding	Zfp474	ENSMUST00000072666	protein_coding	principal1	18	1	52615915	1930
ENSMUSG00000026398	protein_coding	Nr5a2	ENSMUST00000027649	protein_coding		1	-1	136960448	4733
ENSMUSG00000030344	protein_coding	Akap3	ENSMUST00000202574	protein_coding	principal1	6	1	126853160	2879
ENSMUSG00000029009	protein_coding	Mthfr	ENSMUST00000097788	protein_coding	principal3	4	1	148039077	2652
ENSMUSG00000026398	protein_coding	Nr5a2	ENSMUST00000168126	protein_coding		1	-1	136949562	3446
ENSMUSG00000026398	protein_coding	Nr5a2	ENSMUST00000192357	protein_coding	principal1	1	-1	136960380	1859
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000105341	protein_coding	alternative2	10	-1	80431012	2451
ENSMUSG00000033478	protein_coding	Fam160b1	ENSMUST00000237170	nonsense_mediated_decay		19	1	57361030	5110
ENSMUSG00000046886	protein_coding	Zfp474	ENSMUST00000211585	processed_transcript		18	1	52615957	584
ENSMUSG00000029009	protein_coding	Mthfr	ENSMUST00000141283	protein_coding		4	1	148039159	847
ENSMUSG00000046886	protein_coding	Zfp474	ENSMUST00000209270	protein_coding	principal1	18	1	52615982	2113
ENSMUSG00000029009	protein_coding	Mthfr	ENSMUST00000145115	retained_intron		4	1	148040810	1044
ENSMUSG00000024487	protein_coding	Yipf5	ENSMUST00000025364	protein_coding	principal1	18	-1	40219429	3328
ENSMUSG00000029832	protein_coding	Nfe2l3	ENSMUST00000005103	protein_coding	principal1	6	1	51432670	2544
ENSMUSG00000029832	protein_coding	Nfe2l3	ENSMUST00000061507	processed_transcript		6	1	51432749	895
ENSMUSG00000024487	protein_coding	Yipf5	ENSMUST00000236741	processed_transcript		18	-1	40219338	607
ENSMUSG00000029832	protein_coding	Nfe2l3	ENSMUST00000160133	protein_coding		6	1	51432749	1125
ENSMUSG00000111641	TEC	Gm47388	ENSMUST00000217069	TEC		10	1	44697180	2752
ENSMUSG00000071014	protein_coding	Ndufb6	ENSMUST00000095128	protein_coding	principal1	4	-1	40279421	659
ENSMUSG00000029623	protein_coding	Pdap1	ENSMUST00000031627	protein_coding	principal1	5	-1	145140238	2353
ENSMUSG00000026398	protein_coding	Nr5a2	ENSMUST00000192929	protein_coding		1	-1	136953630	1756
ENSMUSG00000024487	protein_coding	Yipf5	ENSMUST00000237176	retained_intron		18	-1	40219343	426
ENSMUSG00000029440	protein_coding	Psmd9	ENSMUST00000100729	protein_coding	principal1	5	1	123228190	2597
ENSMUSG00000111362	lincRNA	Gm47389	ENSMUST00000216787	lincRNA		10	1	44715558	646
ENSMUSG00000026398	protein_coding	Nr5a2	ENSMUST00000192587	retained_intron		1	-1	136940583	621
ENSMUSG00000020681	protein_coding	Ace	ENSMUST00000001963	protein_coding	principal1	11	1	105967945	4906
ENSMUSG00000071014	protein_coding	Ndufb6	ENSMUST00000108108	protein_coding		4	-1	40279409	480
ENSMUSG00000026398	protein_coding	Nr5a2	ENSMUST00000195428	protein_coding		1	-1	136949173	679
ENSMUSG00000029440	protein_coding	Psmd9	ENSMUST00000196137	retained_intron		5	1	123228258	774
ENSMUSG00000058230	protein_coding	Arhgap35	ENSMUST00000075845	protein_coding	principal1	7	-1	16614993	9147
ENSMUSG00000111494	lincRNA	4930431F10Rik	ENSMUST00000213122	lincRNA		10	-1	44738900	1157
ENSMUSG00000029440	protein_coding	Psmd9	ENSMUST00000200560	TEC		5	1	123228947	1925
ENSMUSG00000020681	protein_coding	Ace	ENSMUST00000132280	protein_coding		11	1	105971323	3649
ENSMUSG00000110893	lincRNA	Gm47392	ENSMUST00000217315	lincRNA		10	1	44730940	2265
ENSMUSG00000029009	protein_coding	Mthfr	ENSMUST00000069604	protein_coding	alternative2	4	1	148041191	6072
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000001974	protein_coding	principal3	8	1	84688866	2567
ENSMUSG00000059230	protein_coding	Defb4	ENSMUST00000081017	protein_coding	principal1	8	1	19198706	454
ENSMUSG00000029440	protein_coding	Psmd9	ENSMUST00000197809	protein_coding		5	1	123234594	735
ENSMUSG00000029623	protein_coding	Pdap1	ENSMUST00000123111	processed_transcript		5	-1	145136696	1017
ENSMUSG00000111671	processed_pseudogene	Gm6983	ENSMUST00000214912	processed_pseudogene		10	1	44852614	628
ENSMUSG00000111868	lincRNA	Gm47398	ENSMUST00000214570	lincRNA		10	-1	44866786	2762
ENSMUSG00000058230	protein_coding	Arhgap35	ENSMUST00000171937	protein_coding	principal1	7	-1	16614937	6251
ENSMUSG00000111868	lincRNA	Gm47398	ENSMUST00000215415	lincRNA		10	-1	44866786	1222
ENSMUSG00000020612	protein_coding	Prkar1a	ENSMUST00000123354	processed_transcript		11	1	109649405	306
ENSMUSG00000020681	protein_coding	Ace	ENSMUST00000001964	protein_coding		11	1	105975208	2418
ENSMUSG00000029440	protein_coding	Psmd9	ENSMUST00000198183	protein_coding		5	1	123241835	334
ENSMUSG00000029623	protein_coding	Pdap1	ENSMUST00000143439	retained_intron		5	-1	145135472	676
ENSMUSG00000029623	protein_coding	Pdap1	ENSMUST00000199218	retained_intron		5	-1	145135626	2452
ENSMUSG00000108316	processed_pseudogene	Gm44589	ENSMUST00000207025	processed_pseudogene		7	1	16616351	115
ENSMUSG00000110898	lincRNA	Gm40638	ENSMUST00000216422	lincRNA		10	-1	44943294	682
ENSMUSG00000028407	protein_coding	Smim27	ENSMUST00000129758	protein_coding	principal1	4	1	40269579	1044
ENSMUSG00000029623	protein_coding	Pdap1	ENSMUST00000148781	retained_intron		5	-1	145139998	448
ENSMUSG00000104606	lincRNA	Gm43409	ENSMUST00000195921	lincRNA		5	-1	123191588	2162
ENSMUSG00000101008	lincRNA	Gm29442	ENSMUST00000188725	lincRNA		7	-1	16619832	724
ENSMUSG00000028407	protein_coding	Smim27	ENSMUST00000207780	processed_transcript		4	1	40269784	295
ENSMUSG00000095168	processed_pseudogene	Gm4795	ENSMUST00000095717	processed_pseudogene		10	1	45006110	1008
ENSMUSG00000004791	protein_coding	Pgf	ENSMUST00000223220	protein_coding	alternative2	12	-1	85177790	2080
ENSMUSG00000110891	lincRNA	Gm40639	ENSMUST00000214642	lincRNA		10	1	45024302	625
ENSMUSG00000029009	protein_coding	Mthfr	ENSMUST00000152498	nonsense_mediated_decay		4	1	148041287	4666
ENSMUSG00000020681	protein_coding	Ace	ENSMUST00000151657	processed_transcript		11	1	105976605	695
ENSMUSG00000029009	protein_coding	Mthfr	ENSMUST00000125978	retained_intron		4	1	148041602	760
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000109767	protein_coding	principal3	8	1	84689247	2138
ENSMUSG00000029009	protein_coding	Mthfr	ENSMUST00000156113	nonsense_mediated_decay		4	1	148052678	2104
ENSMUSG00000045273	protein_coding	Cenph	ENSMUST00000075550	protein_coding	principal1	13	-1	100775899	1251
ENSMUSG00000004791	protein_coding	Pgf	ENSMUST00000220985	retained_intron		12	-1	85176274	1226
ENSMUSG00000085297	antisense	Gm11651	ENSMUST00000152925	antisense		11	-1	105985694	1242
ENSMUSG00000004791	protein_coding	Pgf	ENSMUST00000222850	retained_intron		12	-1	85169895	688
ENSMUSG00000063802	protein_coding	Hspbp1	ENSMUST00000079970	protein_coding	principal1	7	-1	4685068	1593
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000176053	processed_transcript		8	1	84689257	384
ENSMUSG00000085297	antisense	Gm11651	ENSMUST00000130673	antisense		11	-1	105985666	529
ENSMUSG00000097748	antisense	Gm26533	ENSMUST00000180550	antisense		18	-1	31789045	1790
ENSMUSG00000045273	protein_coding	Cenph	ENSMUST00000136694	retained_intron		13	-1	100775783	686
ENSMUSG00000063802	protein_coding	Hspbp1	ENSMUST00000205474	protein_coding		7	-1	4664604	306
ENSMUSG00000004791	protein_coding	Pgf	ENSMUST00000004913	protein_coding	principal2	12	-1	85177296	1582
ENSMUSG00000085340	processed_pseudogene	Gm16335	ENSMUST00000077495	processed_pseudogene		13	1	100770464	309
ENSMUSG00000076430	protein_coding	Hus1b	ENSMUST00000102943	protein_coding	principal1	13	-1	30947759	1187
ENSMUSG00000063802	protein_coding	Hspbp1	ENSMUST00000206708	processed_transcript		7	-1	4664769	262
ENSMUSG00000031170	protein_coding	Slc38a5	ENSMUST00000127103	protein_coding		X	1	8271133	360
ENSMUSG00000094764	protein_coding	Olfr346	ENSMUST00000213258	protein_coding	principal1	2	1	36685788	4104
ENSMUSG00000063802	protein_coding	Hspbp1	ENSMUST00000205952	protein_coding		7	-1	4684994	933
ENSMUSG00000094764	protein_coding	Olfr346	ENSMUST00000078854	protein_coding	principal1	2	1	36688004	930
ENSMUSG00000063802	protein_coding	Hspbp1	ENSMUST00000206946	protein_coding		7	-1	4684661	820
ENSMUSG00000002227	protein_coding	Mov10	ENSMUST00000002297	protein_coding	alternative1	3	-1	104818242	3498
ENSMUSG00000073609	protein_coding	D2hgdh	ENSMUST00000097633	protein_coding	principal3	1	1	93825240	3232
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000142864	protein_coding		12	1	75818134	440
ENSMUSG00000036822	protein_coding	Topors	ENSMUST00000042575	protein_coding	principal1	4	-1	40269850	3856
ENSMUSG00000111863	protein_coding	Olfr347	ENSMUST00000216882	protein_coding	principal1	2	1	36731902	3385
ENSMUSG00000051346	protein_coding	Spryd4	ENSMUST00000061995	protein_coding	principal1	10	-1	128211807	1583
ENSMUSG00000063802	protein_coding	Hspbp1	ENSMUST00000206306	protein_coding		7	-1	4684981	813
ENSMUSG00000081562	processed_pseudogene	Gm11575	ENSMUST00000122243	processed_pseudogene		1	-1	60523066	228
ENSMUSG00000028633	protein_coding	Ctps	ENSMUST00000030381	protein_coding	principal1	4	-1	120570276	2705
ENSMUSG00000111863	protein_coding	Olfr347	ENSMUST00000078761	protein_coding	principal1	2	1	36734319	943
ENSMUSG00000104759	processed_pseudogene	Ranbp2-ps12	ENSMUST00000197110	processed_pseudogene		7	-1	15767199	386
ENSMUSG00000084400	processed_pseudogene	Gm11576	ENSMUST00000117433	processed_pseudogene		1	1	60537020	417
ENSMUSG00000105410	processed_pseudogene	Gtpbp4-ps7	ENSMUST00000197059	processed_pseudogene		7	-1	15788160	297
ENSMUSG00000118550	sense_intronic	AC135859.1	ENSMUST00000239116	sense_intronic		10	1	128196071	1524
ENSMUSG00000082251	processed_pseudogene	Gm13438	ENSMUST00000120100	processed_pseudogene		2	1	36768688	573
ENSMUSG00000073609	protein_coding	D2hgdh	ENSMUST00000112881	protein_coding	alternative2	1	1	93825274	3459
ENSMUSG00000113681	processed_pseudogene	Gm45930	ENSMUST00000221330	processed_pseudogene		12	-1	85187805	292
ENSMUSG00000101743	lincRNA	Gm28249	ENSMUST00000190011	lincRNA		Y	-1	27069161	1495
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000105340	protein_coding	alternative2	10	-1	80433635	2826
ENSMUSG00000028633	protein_coding	Ctps	ENSMUST00000140891	processed_transcript		4	-1	120548101	525
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000020379	protein_coding	alternative2	10	-1	80433635	2829
ENSMUSG00000028633	protein_coding	Ctps	ENSMUST00000147980	processed_transcript		4	-1	120545067	905
ENSMUSG00000049315	protein_coding	Olfr348	ENSMUST00000213498	protein_coding	principal1	2	1	36784276	3540
ENSMUSG00000108329	lincRNA	Gm44725	ENSMUST00000205307	lincRNA		7	1	73089423	391
ENSMUSG00000073609	protein_coding	D2hgdh	ENSMUST00000149397	processed_transcript		1	1	93826283	790
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000128537	retained_intron		8	1	84689257	871
ENSMUSG00000101743	lincRNA	Gm28249	ENSMUST00000187822	lincRNA		Y	-1	27068709	619
ENSMUSG00000049315	protein_coding	Olfr348	ENSMUST00000214909	protein_coding	principal1	2	1	36784276	3634
ENSMUSG00000101743	lincRNA	Gm28249	ENSMUST00000187703	lincRNA		Y	-1	27068709	435
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000156990	protein_coding		10	-1	80430985	1993
ENSMUSG00000073609	protein_coding	D2hgdh	ENSMUST00000189154	protein_coding		1	1	93826285	681
ENSMUSG00000049315	protein_coding	Olfr348	ENSMUST00000215199	protein_coding	principal1	2	1	36784356	3557
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000105339	protein_coding	alternative2	10	-1	80431082	2096
ENSMUSG00000108383	lincRNA	Gm6567	ENSMUST00000205529	lincRNA		7	-1	73102068	2095
ENSMUSG00000073609	protein_coding	D2hgdh	ENSMUST00000141701	processed_transcript		1	1	93826562	689
ENSMUSG00000073609	protein_coding	D2hgdh	ENSMUST00000186783	nonsense_mediated_decay		1	1	93829796	307
ENSMUSG00000055839	protein_coding	Elob	ENSMUST00000069579	protein_coding	principal1	17	-1	23829136	537
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000177084	protein_coding		8	1	84689257	921
ENSMUSG00000049315	protein_coding	Olfr348	ENSMUST00000056865	protein_coding	principal1	2	1	36786527	942
ENSMUSG00000073609	protein_coding	D2hgdh	ENSMUST00000188532	protein_coding		1	1	93829797	233
ENSMUSG00000108345	lincRNA	4933435G04Rik	ENSMUST00000205892	lincRNA		7	1	73124451	2108
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000129027	processed_transcript		10	-1	80415487	819
ENSMUSG00000110426	TEC	Gm45757	ENSMUST00000211835	TEC		8	1	95045981	1480
ENSMUSG00000041491	protein_coding	Cep78	ENSMUST00000235718	nonsense_mediated_decay		19	-1	15984973	2667
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000127931	retained_intron		10	-1	80416288	638
ENSMUSG00000041915	protein_coding	Ammecr1l	ENSMUST00000234500	retained_intron		18	1	31759826	2689
ENSMUSG00000055839	protein_coding	Elob	ENSMUST00000233593	nonsense_mediated_decay		17	-1	23829098	578
ENSMUSG00000073079	protein_coding	Srp54a	ENSMUST00000220578	protein_coding	principal1	12	1	55080262	4498
ENSMUSG00000002227	protein_coding	Mov10	ENSMUST00000106774	nonsense_mediated_decay		3	-1	104818563	3718
ENSMUSG00000041046	protein_coding	Ramp3	ENSMUST00000045374	protein_coding	principal1	11	1	6658521	1233
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000049388	protein_coding	principal1	18	1	46958816	1610
ENSMUSG00000073079	protein_coding	Srp54a	ENSMUST00000221655	protein_coding		12	1	55080277	472
ENSMUSG00000041491	protein_coding	Cep78	ENSMUST00000047704	protein_coding	principal1	19	-1	15984989	2548
ENSMUSG00000073079	protein_coding	Srp54a	ENSMUST00000223111	processed_transcript		12	1	55080526	580
ENSMUSG00000020167	protein_coding	Tcf3	ENSMUST00000156244	protein_coding		10	-1	80421860	430
ENSMUSG00000022639	lincRNA	Dubr	ENSMUST00000186944	lincRNA		16	-1	50732773	2052
ENSMUSG00000073079	protein_coding	Srp54a	ENSMUST00000221479	retained_intron		12	1	55080560	1026
ENSMUSG00000041046	protein_coding	Ramp3	ENSMUST00000139540	processed_transcript		11	1	6658565	1333
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000234069	processed_transcript		18	1	46958854	339
ENSMUSG00000073079	protein_coding	Srp54a	ENSMUST00000222027	protein_coding		12	1	55089224	428
ENSMUSG00000022639	lincRNA	Dubr	ENSMUST00000191079	lincRNA		16	-1	50732683	2105
ENSMUSG00000073079	protein_coding	Srp54a	ENSMUST00000021407	protein_coding	principal1	12	1	55089202	1515
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000234952	retained_intron		18	1	46958858	597
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000234961	protein_coding		18	1	46958861	792
ENSMUSG00000022639	lincRNA	Dubr	ENSMUST00000186535	lincRNA		16	-1	50732728	2896
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000234124	nonsense_mediated_decay		18	1	46958861	2425
ENSMUSG00000041491	protein_coding	Cep78	ENSMUST00000236749	retained_intron		19	-1	15984693	2465
ENSMUSG00000002227	protein_coding	Mov10	ENSMUST00000106775	protein_coding		3	-1	104818563	3584
ENSMUSG00000022639	lincRNA	Dubr	ENSMUST00000186806	lincRNA		16	-1	50732737	2264
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000234944	nonsense_mediated_decay		18	1	46958865	1322
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000109768	protein_coding	alternative2	8	1	84689264	2044
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000234280	protein_coding		18	1	46958875	600
ENSMUSG00000086373	transcribed_processed_pseudogene	Gm11978	ENSMUST00000127510	processed_transcript		11	-1	6660233	1303
ENSMUSG00000022639	lincRNA	Dubr	ENSMUST00000169791	lincRNA		16	-1	50732688	810
ENSMUSG00000086373	transcribed_processed_pseudogene	Gm11978	ENSMUST00000122315	transcribed_processed_pseudogene		11	-1	6650839	466
ENSMUSG00000002227	protein_coding	Mov10	ENSMUST00000196161	processed_transcript		3	-1	104817354	454
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000234085	protein_coding		18	1	46958878	494
ENSMUSG00000086373	transcribed_processed_pseudogene	Gm11978	ENSMUST00000143152	processed_transcript		11	-1	6658726	365
ENSMUSG00000020612	protein_coding	Prkar1a	ENSMUST00000106677	protein_coding	principal1	11	1	109649405	3513
ENSMUSG00000086373	transcribed_processed_pseudogene	Gm11978	ENSMUST00000142928	processed_transcript		11	-1	6660210	252
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000234701	protein_coding		18	1	46958880	528
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000234376	retained_intron		18	1	46963556	619
ENSMUSG00000002227	protein_coding	Mov10	ENSMUST00000136148	nonsense_mediated_decay		3	-1	104818563	755
ENSMUSG00000092576	lincRNA	Obox4-ps35	ENSMUST00000173825	lincRNA		7	-1	15825815	680
ENSMUSG00000020612	protein_coding	Prkar1a	ENSMUST00000106676	protein_coding		11	1	109650575	962
ENSMUSG00000030650	protein_coding	Tmc5	ENSMUST00000121715	protein_coding	alternative2	7	1	118597297	3906
ENSMUSG00000042705	protein_coding	Commd10	ENSMUST00000234664	retained_intron		18	1	47106915	2453
ENSMUSG00000055839	protein_coding	Elob	ENSMUST00000232702	processed_transcript		17	-1	23829083	581
ENSMUSG00000002227	protein_coding	Mov10	ENSMUST00000196211	retained_intron		3	-1	104818116	1876
ENSMUSG00000055839	protein_coding	Elob	ENSMUST00000233483	processed_transcript		17	-1	23828803	442
ENSMUSG00000055839	protein_coding	Elob	ENSMUST00000233796	processed_transcript		17	-1	23828811	512
ENSMUSG00000118093	processed_pseudogene	Gm17802	ENSMUST00000235219	processed_pseudogene		19	1	12273011	1349
ENSMUSG00000020612	protein_coding	Prkar1a	ENSMUST00000049527	protein_coding	principal1	11	1	109650921	3359
ENSMUSG00000030650	protein_coding	Tmc5	ENSMUST00000121744	protein_coding	alternative2	7	1	118600170	3533
ENSMUSG00000002227	protein_coding	Mov10	ENSMUST00000145414	processed_transcript		3	-1	104818301	763
ENSMUSG00000108415	lincRNA	Gm30146	ENSMUST00000206564	lincRNA		7	1	25860140	605
ENSMUSG00000055839	protein_coding	Elob	ENSMUST00000233857	processed_transcript		17	-1	23828831	366
ENSMUSG00000042328	protein_coding	Hps4	ENSMUST00000112359	protein_coding	principal1	5	1	112343083	3345
ENSMUSG00000020612	protein_coding	Prkar1a	ENSMUST00000155532	processed_transcript		11	1	109665944	376
ENSMUSG00000108809	processed_pseudogene	Gm45228	ENSMUST00000206585	processed_pseudogene		7	1	25875325	352
ENSMUSG00000036120	protein_coding	Rfxank	ENSMUST00000075724	protein_coding	principal1	8	-1	70139154	3609
ENSMUSG00000030650	protein_coding	Tmc5	ENSMUST00000155572	protein_coding		7	1	118622514	615
ENSMUSG00000042328	protein_coding	Hps4	ENSMUST00000176737	processed_transcript		5	1	112343093	734
ENSMUSG00000091233	processed_pseudogene	Gm6434	ENSMUST00000163316	processed_pseudogene		7	-1	25882389	372
ENSMUSG00000055839	protein_coding	Elob	ENSMUST00000233519	processed_transcript		17	-1	23829114	414
ENSMUSG00000041915	protein_coding	Ammecr1l	ENSMUST00000115808	protein_coding	principal1	18	1	31759880	3385
ENSMUSG00000055839	protein_coding	Elob	ENSMUST00000233882	retained_intron		17	-1	23828875	564
ENSMUSG00000026014	protein_coding	Raph1	ENSMUST00000140485	protein_coding	principal2	1	-1	60566779	10024
ENSMUSG00000026014	protein_coding	Raph1	ENSMUST00000182085	protein_coding		1	-1	60499550	701
ENSMUSG00000030650	protein_coding	Tmc5	ENSMUST00000057320	protein_coding	principal3	7	1	118633736	2926
ENSMUSG00000041915	protein_coding	Ammecr1l	ENSMUST00000234441	retained_intron		18	1	31760610	2898
ENSMUSG00000062980	protein_coding	Cped1	ENSMUST00000115383	protein_coding	principal2	6	1	21985916	5690
ENSMUSG00000026014	protein_coding	Raph1	ENSMUST00000090293	protein_coding	alternative2	1	-1	60566769	2409
ENSMUSG00000041915	protein_coding	Ammecr1l	ENSMUST00000234413	protein_coding	principal1	18	1	31761076	3181
ENSMUSG00000024532	protein_coding	1700034E13Rik	ENSMUST00000118724	protein_coding	principal1	18	1	52646209	490
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000180975	retained_intron		17	1	23790532	2266
ENSMUSG00000113432	TEC	8430406P12Rik	ENSMUST00000220908	TEC		13	-1	17737054	1070
ENSMUSG00000042328	protein_coding	Hps4	ENSMUST00000035279	protein_coding	principal1	5	1	112343095	2836
ENSMUSG00000095640	protein_coding	Olfr1434	ENSMUST00000207186	protein_coding	principal1	19	1	12279854	2714
ENSMUSG00000026014	protein_coding	Raph1	ENSMUST00000188511	retained_intron		1	-1	60496281	536
ENSMUSG00000030650	protein_coding	Tmc5	ENSMUST00000098088	protein_coding	alternative2	7	1	118597297	3774
ENSMUSG00000062980	protein_coding	Cped1	ENSMUST00000141064	processed_transcript		6	1	21985944	1794
ENSMUSG00000041915	protein_coding	Ammecr1l	ENSMUST00000234191	protein_coding		18	1	31761804	3174
ENSMUSG00000026014	protein_coding	Raph1	ENSMUST00000189383	retained_intron		1	-1	60503265	1663
ENSMUSG00000024532	protein_coding	1700034E13Rik	ENSMUST00000091904	protein_coding	principal1	18	1	52646216	439
ENSMUSG00000026014	protein_coding	Raph1	ENSMUST00000127573	retained_intron		1	-1	60522291	8483
ENSMUSG00000095640	protein_coding	Olfr1434	ENSMUST00000207915	protein_coding		19	1	12279939	437
ENSMUSG00000026014	protein_coding	Raph1	ENSMUST00000142258	protein_coding		1	-1	60567104	690
ENSMUSG00000029445	protein_coding	Hpd	ENSMUST00000031398	protein_coding	principal1	5	-1	123182727	1404
ENSMUSG00000095640	protein_coding	Olfr1434	ENSMUST00000208197	protein_coding	principal1	19	1	12282984	1229
ENSMUSG00000062980	protein_coding	Cped1	ENSMUST00000153922	nonsense_mediated_decay		6	1	21985944	3520
ENSMUSG00000053624	protein_coding	Gykl1	ENSMUST00000066193	protein_coding	principal1	18	1	52693690	1861
ENSMUSG00000029661	protein_coding	Col1a2	ENSMUST00000031668	protein_coding	principal1	6	1	4505493	5348
ENSMUSG00000026014	protein_coding	Raph1	ENSMUST00000027168	protein_coding	alternative2	1	-1	60566765	2241
ENSMUSG00000025737	protein_coding	Wdr24	ENSMUST00000026833	protein_coding	principal1	17	1	25823627	3099
ENSMUSG00000042328	protein_coding	Hps4	ENSMUST00000133708	retained_intron		5	1	112343095	3189
ENSMUSG00000091091	protein_coding	Kcnmb3	ENSMUST00000164954	protein_coding	principal1	3	-1	32492231	1715
ENSMUSG00000062980	protein_coding	Cped1	ENSMUST00000115382	protein_coding	alternative2	6	1	21986596	2002
ENSMUSG00000036120	protein_coding	Rfxank	ENSMUST00000212320	protein_coding		8	-1	70139096	1121
ENSMUSG00000109433	unprocessed_pseudogene	Olfr1435-ps1	ENSMUST00000207773	unprocessed_pseudogene		19	-1	12290306	249
ENSMUSG00000029445	protein_coding	Hpd	ENSMUST00000155092	processed_transcript		5	-1	123172911	511
ENSMUSG00000084307	processed_pseudogene	Gm12151	ENSMUST00000121374	processed_pseudogene		11	-1	43463485	290
ENSMUSG00000029445	protein_coding	Hpd	ENSMUST00000144679	protein_coding		5	-1	123175915	334
ENSMUSG00000042328	protein_coding	Hps4	ENSMUST00000175718	processed_transcript		5	1	112343100	820
ENSMUSG00000002227	protein_coding	Mov10	ENSMUST00000168015	protein_coding	principal2	3	-1	104818305	3460
ENSMUSG00000042328	protein_coding	Hps4	ENSMUST00000129839	retained_intron		5	1	112368745	548
ENSMUSG00000036120	protein_coding	Rfxank	ENSMUST00000212472	retained_intron		8	-1	70135627	528
ENSMUSG00000097557	bidirectional_promoter_lncRNA	C130060C02Rik	ENSMUST00000181731	bidirectional_promoter_lncRNA		19	1	15985078	938
ENSMUSG00000067513	protein_coding	Olfr1436	ENSMUST00000087812	protein_coding	principal1	19	-1	12299130	948
ENSMUSG00000002227	protein_coding	Mov10	ENSMUST00000166979	protein_coding		3	-1	104818563	3584
ENSMUSG00000074884	protein_coding	Serf2	ENSMUST00000139253	protein_coding	principal3	2	1	121449195	3056
ENSMUSG00000042328	protein_coding	Hps4	ENSMUST00000177121	retained_intron		5	1	112375335	570
ENSMUSG00000117711	processed_pseudogene	Rpl37-ps1	ENSMUST00000235413	processed_pseudogene		19	1	16025451	267
ENSMUSG00000062980	protein_coding	Cped1	ENSMUST00000151315	processed_transcript		6	1	21986892	645
ENSMUSG00000062980	protein_coding	Cped1	ENSMUST00000137437	protein_coding	alternative2	6	1	22017066	2484
ENSMUSG00000109229	unprocessed_pseudogene	Gm44858	ENSMUST00000207360	unprocessed_pseudogene		19	-1	12315027	154
ENSMUSG00000104885	TEC	Gm43758	ENSMUST00000199500	TEC		5	-1	112372951	367
ENSMUSG00000029661	protein_coding	Col1a2	ENSMUST00000138511	retained_intron		6	1	4505702	2550
ENSMUSG00000062980	protein_coding	Cped1	ENSMUST00000156621	processed_transcript		6	1	22025943	399
ENSMUSG00000025737	protein_coding	Wdr24	ENSMUST00000160349	retained_intron		17	1	25823649	3139
ENSMUSG00000029661	protein_coding	Col1a2	ENSMUST00000132029	retained_intron		6	1	4505702	3689
ENSMUSG00000051503	protein_coding	Gm6583	ENSMUST00000051117	protein_coding	principal1	5	-1	112356033	2233
ENSMUSG00000025737	protein_coding	Wdr24	ENSMUST00000160829	processed_transcript		17	1	25824530	317
ENSMUSG00000062980	protein_coding	Cped1	ENSMUST00000154734	retained_intron		6	1	22135546	643
ENSMUSG00000029445	protein_coding	Hpd	ENSMUST00000156539	retained_intron		5	-1	123182722	975
ENSMUSG00000074884	protein_coding	Serf2	ENSMUST00000134412	retained_intron		2	1	121449368	3105
ENSMUSG00000096436	protein_coding	Olfr1437	ENSMUST00000207241	protein_coding	principal1	19	-1	12325101	3751
ENSMUSG00000071078	protein_coding	Nr2c2ap	ENSMUST00000211898	protein_coding	alternative2	8	1	70131333	1078
ENSMUSG00000106736	processed_pseudogene	Gm42573	ENSMUST00000202327	processed_pseudogene		6	-1	22245934	478
ENSMUSG00000025737	protein_coding	Wdr24	ENSMUST00000160275	retained_intron		17	1	25824662	716
ENSMUSG00000074884	protein_coding	Serf2	ENSMUST00000110615	protein_coding		2	1	121449378	876
ENSMUSG00000100195	unprocessed_pseudogene	Gm29244	ENSMUST00000185825	unprocessed_pseudogene		Y	-1	55768255	696
ENSMUSG00000029445	protein_coding	Hpd	ENSMUST00000154713	protein_coding		5	-1	123182723	744
ENSMUSG00000096436	protein_coding	Olfr1437	ENSMUST00000052558	protein_coding	principal1	19	-1	12323063	1177
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000065601	protein_coding	principal3	19	1	45363751	2978
ENSMUSG00000079171	lincRNA	Gm13942	ENSMUST00000136950	lincRNA		2	-1	111057574	325
ENSMUSG00000075268	processed_pseudogene	Gm10819	ENSMUST00000099988	processed_pseudogene		19	-1	16267621	561
ENSMUSG00000078762	protein_coding	Haus5	ENSMUST00000132862	nonsense_mediated_decay		7	-1	30664933	2070
ENSMUSG00000029445	protein_coding	Hpd	ENSMUST00000124110	processed_transcript		5	-1	123182067	326
ENSMUSG00000079659	protein_coding	Tmem243	ENSMUST00000196029	nonsense_mediated_decay		5	1	9100668	1369
ENSMUSG00000003437	protein_coding	Paf1	ENSMUST00000003529	protein_coding	principal1	7	1	28392951	2003
ENSMUSG00000078528	processed_pseudogene	Gm17068	ENSMUST00000163135	processed_pseudogene		19	1	16277797	980
ENSMUSG00000109328	protein_coding	Olfr1438-ps1	ENSMUST00000208398	protein_coding	principal1	19	-1	12335910	4761
ENSMUSG00000103542	unprocessed_pseudogene	Gm34768	ENSMUST00000193884	unprocessed_pseudogene		2	1	11900082	565
ENSMUSG00000074884	protein_coding	Serf2	ENSMUST00000099475	protein_coding	alternative1	2	1	121449383	525
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000186961	protein_coding		17	1	23790662	950
ENSMUSG00000109007	unprocessed_pseudogene	Olfr1439-ps1	ENSMUST00000207089	unprocessed_pseudogene		19	-1	12341130	824
ENSMUSG00000092227	unprocessed_pseudogene	Gm7651	ENSMUST00000173398	unprocessed_pseudogene		7	-1	7614771	901
ENSMUSG00000114375	processed_pseudogene	Gm31544	ENSMUST00000225302	processed_pseudogene		13	1	120046573	441
ENSMUSG00000101148	processed_pseudogene	Gm28200	ENSMUST00000187778	processed_pseudogene		Y	-1	55796374	315
ENSMUSG00000003437	protein_coding	Paf1	ENSMUST00000146604	retained_intron		7	1	28392962	672
ENSMUSG00000117589	processed_pseudogene	Gm18713	ENSMUST00000234203	processed_pseudogene		18	-1	11752555	277
ENSMUSG00000071078	protein_coding	Nr2c2ap	ENSMUST00000095273	protein_coding	principal2	8	1	70131347	1161
ENSMUSG00000079170	protein_coding	Gm13941	ENSMUST00000127918	protein_coding	principal1	2	-1	111105982	736
ENSMUSG00000074884	protein_coding	Serf2	ENSMUST00000154418	nonsense_mediated_decay		2	1	121449412	1899
ENSMUSG00000101580	lincRNA	Gm28201	ENSMUST00000189989	lincRNA		Y	-1	55801133	2166
ENSMUSG00000079659	protein_coding	Tmem243	ENSMUST00000115365	protein_coding	principal1	5	1	9100747	1040
ENSMUSG00000074884	protein_coding	Serf2	ENSMUST00000148575	nonsense_mediated_decay		2	1	121449412	695
ENSMUSG00000092276	lincRNA	1700116B05Rik	ENSMUST00000173461	lincRNA		16	1	50783409	414
ENSMUSG00000092439	unprocessed_pseudogene	Vmn2r-ps37	ENSMUST00000174682	unprocessed_pseudogene		7	-1	7645360	1044
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000225662	retained_intron		19	1	45363752	4502
ENSMUSG00000022146	protein_coding	Osmr	ENSMUST00000022746	protein_coding	principal3	15	-1	6874969	5491
ENSMUSG00000071078	protein_coding	Nr2c2ap	ENSMUST00000212851	retained_intron		8	1	70131347	1507
ENSMUSG00000092276	lincRNA	1700116B05Rik	ENSMUST00000174511	lincRNA		16	1	50783478	316
ENSMUSG00000079659	protein_coding	Tmem243	ENSMUST00000198935	protein_coding		5	1	9113248	849
ENSMUSG00000029661	protein_coding	Col1a2	ENSMUST00000148864	retained_intron		6	1	4520624	3221
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000225898	retained_intron		19	1	45363757	515
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000224102	protein_coding		19	1	45363811	3037
ENSMUSG00000079659	protein_coding	Tmem243	ENSMUST00000200542	processed_transcript		5	1	9155733	5254
ENSMUSG00000095609	protein_coding	Gm21188	ENSMUST00000224713	protein_coding	principal1	13	-1	120052130	1669
ENSMUSG00000022146	protein_coding	Osmr	ENSMUST00000176826	protein_coding	alternative2	15	-1	6874969	4028
ENSMUSG00000078762	protein_coding	Haus5	ENSMUST00000019697	protein_coding	principal1	7	-1	30664994	2187
ENSMUSG00000029661	protein_coding	Col1a2	ENSMUST00000155687	retained_intron		6	1	4530156	1519
ENSMUSG00000095609	protein_coding	Gm21188	ENSMUST00000225638	retained_intron		13	-1	120052178	2518
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000111936	protein_coding	alternative1	19	1	45363833	2064
ENSMUSG00000030114	protein_coding	Klrg1	ENSMUST00000032207	protein_coding	principal1	6	-1	122282882	1414
ENSMUSG00000095609	protein_coding	Gm21188	ENSMUST00000224147	retained_intron		13	-1	120052194	1761
ENSMUSG00000022146	protein_coding	Osmr	ENSMUST00000176554	retained_intron		15	-1	6824595	854
ENSMUSG00000095609	protein_coding	Gm21188	ENSMUST00000178618	protein_coding	principal1	13	-1	120035331	573
ENSMUSG00000029661	protein_coding	Col1a2	ENSMUST00000124686	retained_intron		6	1	4535781	628
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000044776	protein_coding	principal1	10	1	128194457	2573
ENSMUSG00000029661	protein_coding	Col1a2	ENSMUST00000203346	retained_intron		6	1	4537489	502
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000224318	protein_coding		19	1	45364087	338
ENSMUSG00000078762	protein_coding	Haus5	ENSMUST00000132982	retained_intron		7	-1	30657003	420
ENSMUSG00000046491	protein_coding	C1qtnf2	ENSMUST00000173002	protein_coding	alternative2	11	1	43474276	1147
ENSMUSG00000100842	processed_pseudogene	Gm17790	ENSMUST00000191545	processed_pseudogene		Y	1	1736187	1228
ENSMUSG00000108090	processed_pseudogene	Gm6637	ENSMUST00000204884	processed_pseudogene		6	1	122295664	382
ENSMUSG00000078762	protein_coding	Haus5	ENSMUST00000142823	retained_intron		7	-1	30658962	539
ENSMUSG00000108183	processed_pseudogene	Gm44227	ENSMUST00000203576	processed_pseudogene		6	1	122305948	241
ENSMUSG00000003437	protein_coding	Paf1	ENSMUST00000122857	retained_intron		7	1	28393041	1997
ENSMUSG00000101947	processed_pseudogene	Gm29167	ENSMUST00000190024	processed_pseudogene		Y	1	1788576	377
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000223684	protein_coding		19	1	45364087	361
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000123291	protein_coding		10	1	128194637	495
ENSMUSG00000003437	protein_coding	Paf1	ENSMUST00000143201	retained_intron		7	1	28393161	488
ENSMUSG00000075025	lincRNA	Gm10804	ENSMUST00000099693	lincRNA		2	1	93452819	2244
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000224439	retained_intron		19	1	45445466	3493
ENSMUSG00000003437	protein_coding	Paf1	ENSMUST00000132910	retained_intron		7	1	28393458	612
ENSMUSG00000022146	protein_coding	Osmr	ENSMUST00000175862	retained_intron		15	-1	6874268	2136
ENSMUSG00000046491	protein_coding	C1qtnf2	ENSMUST00000057679	protein_coding	principal2	11	1	43474306	1211
ENSMUSG00000022146	protein_coding	Osmr	ENSMUST00000177478	retained_intron		15	-1	6874257	1015
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000152887	protein_coding		16	-1	20301813	1355
ENSMUSG00000003437	protein_coding	Paf1	ENSMUST00000154823	retained_intron		7	1	28394763	591
ENSMUSG00000033383	protein_coding	Rtp1	ENSMUST00000038730	protein_coding	principal1	16	1	23429133	3120
ENSMUSG00000024639	protein_coding	Gnaq	ENSMUST00000025541	protein_coding	principal1	19	1	16132831	5644
ENSMUSG00000075025	lincRNA	Gm10804	ENSMUST00000162565	lincRNA		2	1	93452820	867
ENSMUSG00000022146	protein_coding	Osmr	ENSMUST00000177263	retained_intron		15	-1	6874296	5487
ENSMUSG00000075025	lincRNA	Gm10804	ENSMUST00000163052	lincRNA		2	1	93452821	678
ENSMUSG00000075025	lincRNA	Gm10804	ENSMUST00000167654	lincRNA		2	1	93468439	237
ENSMUSG00000003437	protein_coding	Paf1	ENSMUST00000152512	retained_intron		7	1	28395425	576
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000224053	processed_transcript		19	1	45445508	4720
ENSMUSG00000078762	protein_coding	Haus5	ENSMUST00000126511	retained_intron		7	-1	30664960	1788
ENSMUSG00000057751	protein_coding	Megf6	ENSMUST00000030897	protein_coding	principal1	4	1	154170730	6851
ENSMUSG00000025217	protein_coding	Btrc	ENSMUST00000224478	protein_coding		19	1	45445508	2194
ENSMUSG00000003437	protein_coding	Paf1	ENSMUST00000146886	retained_intron		7	1	28395825	919
ENSMUSG00000046491	protein_coding	C1qtnf2	ENSMUST00000151912	protein_coding		11	1	43480829	535
ENSMUSG00000024639	protein_coding	Gnaq	ENSMUST00000170229	retained_intron		19	1	16133296	862
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000131700	nonsense_mediated_decay		8	1	84689269	1104
ENSMUSG00000108482	processed_pseudogene	Gm45078	ENSMUST00000205343	processed_pseudogene		7	1	41594892	546
ENSMUSG00000003437	protein_coding	Paf1	ENSMUST00000145339	retained_intron		7	1	28396651	467
ENSMUSG00000027245	protein_coding	Hypk	ENSMUST00000110612	protein_coding	principal1	2	1	121453290	4170
ENSMUSG00000097060	antisense	Gm26759	ENSMUST00000181773	antisense		8	1	126566970	1251
ENSMUSG00000078762	protein_coding	Haus5	ENSMUST00000142741	retained_intron		7	-1	30660855	1064
ENSMUSG00000024639	protein_coding	Gnaq	ENSMUST00000167656	processed_transcript		19	1	16219632	481
ENSMUSG00000003437	protein_coding	Paf1	ENSMUST00000146913	retained_intron		7	1	28398434	446
ENSMUSG00000057990	processed_pseudogene	E030024N20Rik	ENSMUST00000075293	processed_pseudogene		19	-1	16164805	494
ENSMUSG00000090112	protein_coding	Shprh	ENSMUST00000159810	nonsense_mediated_decay		10	1	11149427	4171
ENSMUSG00000057751	protein_coding	Megf6	ENSMUST00000152159	protein_coding		4	1	154237525	3770
ENSMUSG00000027245	protein_coding	Hypk	ENSMUST00000125849	retained_intron		2	1	121456693	1349
ENSMUSG00000057751	protein_coding	Megf6	ENSMUST00000183595	retained_intron		4	1	154249296	469
ENSMUSG00000051495	protein_coding	Irf2bp2	ENSMUST00000054960	protein_coding	principal1	8	-1	126593986	5080
ENSMUSG00000112119	processed_pseudogene	Gm47362	ENSMUST00000219266	processed_pseudogene		10	-1	85745068	895
ENSMUSG00000034528	protein_coding	Hsd17b13	ENSMUST00000048118	protein_coding	principal3	5	-1	103977364	1708
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000152301	protein_coding		8	1	84689272	825
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000190686	protein_coding	principal1	17	1	23803187	8864
ENSMUSG00000044308	protein_coding	Ubr3	ENSMUST00000055758	protein_coding	principal2	2	1	69897246	8072
ENSMUSG00000068818	protein_coding	Olfr1132	ENSMUST00000216082	protein_coding	principal1	2	-1	87637535	3260
ENSMUSG00000027245	protein_coding	Hypk	ENSMUST00000126764	protein_coding	principal1	2	1	121456963	961
ENSMUSG00000068818	protein_coding	Olfr1132	ENSMUST00000090711	protein_coding	principal1	2	-1	87635745	927
ENSMUSG00000112568	processed_pseudogene	Gm47363	ENSMUST00000218975	processed_pseudogene		10	-1	85745951	549
ENSMUSG00000082428	processed_pseudogene	Gm13742	ENSMUST00000118805	processed_pseudogene		2	-1	87640793	457
ENSMUSG00000111891	processed_pseudogene	Gm47366	ENSMUST00000219945	processed_pseudogene		10	-1	85765762	1498
ENSMUSG00000034528	protein_coding	Hsd17b13	ENSMUST00000120320	protein_coding		5	-1	103977326	1118
ENSMUSG00000111996	processed_pseudogene	Gm47365	ENSMUST00000218683	processed_pseudogene		10	-1	85765762	1177
ENSMUSG00000027245	protein_coding	Hypk	ENSMUST00000131870	retained_intron		2	1	121457124	724
ENSMUSG00000027245	protein_coding	Hypk	ENSMUST00000028677	processed_transcript		2	1	121457134	425
ENSMUSG00000044308	protein_coding	Ubr3	ENSMUST00000131553	protein_coding		2	1	69897303	1801
ENSMUSG00000094365	processed_transcript	Gm21982	ENSMUST00000146232	retained_intron		7	-1	30664937	3821
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000088621	protein_coding		17	1	23803221	8564
ENSMUSG00000034528	protein_coding	Hsd17b13	ENSMUST00000112803	protein_coding	alternative2	5	-1	103977410	1310
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000233636	protein_coding		17	1	23803234	678
ENSMUSG00000044308	protein_coding	Ubr3	ENSMUST00000142563	processed_transcript		2	1	69935969	751
ENSMUSG00000044308	protein_coding	Ubr3	ENSMUST00000152610	protein_coding		2	1	69988786	727
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000191385	protein_coding		17	1	23807918	459
ENSMUSG00000101843	lincRNA	Gm28746	ENSMUST00000187453	lincRNA		7	-1	73185393	380
ENSMUSG00000057751	protein_coding	Megf6	ENSMUST00000127088	processed_transcript		4	1	154264615	3378
ENSMUSG00000057751	protein_coding	Megf6	ENSMUST00000128700	protein_coding		4	1	154266171	995
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000190293	retained_intron		17	1	23808098	431
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000127915	retained_intron		8	1	84689283	980
ENSMUSG00000042364	protein_coding	Snx18	ENSMUST00000109241	protein_coding	principal1	13	-1	113618564	4447
ENSMUSG00000108778	lincRNA	Gm20083	ENSMUST00000205849	lincRNA		7	1	73185744	751
ENSMUSG00000057751	protein_coding	Megf6	ENSMUST00000138945	retained_intron		4	1	154269786	944
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000186045	nonsense_mediated_decay		17	1	23811672	494
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000136252	nonsense_mediated_decay		16	-1	20302345	1362
ENSMUSG00000042364	protein_coding	Snx18	ENSMUST00000223993	processed_transcript		13	-1	113613641	3269
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000189977	retained_intron		17	1	23811900	2092
ENSMUSG00000108778	lincRNA	Gm20083	ENSMUST00000206663	lincRNA		7	1	73185803	1008
ENSMUSG00000057751	protein_coding	Megf6	ENSMUST00000142110	retained_intron		4	1	154269881	768
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000186914	processed_transcript		17	1	23819308	2991
ENSMUSG00000116140	processed_pseudogene	Gm7748	ENSMUST00000230520	processed_pseudogene		16	1	15609107	409
ENSMUSG00000114424	lincRNA	Gm47414	ENSMUST00000223774	lincRNA		14	-1	29961381	2151
ENSMUSG00000042364	protein_coding	Snx18	ENSMUST00000224883	processed_transcript		13	-1	113614014	549
ENSMUSG00000036990	protein_coding	Otud4	ENSMUST00000173078	protein_coding	principal4	8	1	79639618	7354
ENSMUSG00000108513	lincRNA	Gm30075	ENSMUST00000205509	lincRNA		7	-1	73238531	3005
ENSMUSG00000048480	protein_coding	Cxcr1	ENSMUST00000190313	protein_coding	principal1	1	-1	74193235	1451
ENSMUSG00000112009	sense_intronic	Gm48591	ENSMUST00000220023	sense_intronic		10	-1	121462694	469
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000186259	nonsense_mediated_decay		17	1	23821387	647
ENSMUSG00000029575	protein_coding	Mmab	ENSMUST00000031560	protein_coding	principal1	5	-1	114444060	3020
ENSMUSG00000046110	protein_coding	Serinc4	ENSMUST00000140752	nonsense_mediated_decay		2	-1	121455837	2223
ENSMUSG00000039218	protein_coding	Srrm2	ENSMUST00000190568	retained_intron		17	1	23823525	597
ENSMUSG00000117219	processed_pseudogene	Gm49911	ENSMUST00000232757	processed_pseudogene		17	-1	23813500	287
ENSMUSG00000036990	protein_coding	Otud4	ENSMUST00000173286	protein_coding	alternative2	8	1	79639704	7213
ENSMUSG00000029575	protein_coding	Mmab	ENSMUST00000112245	protein_coding		5	-1	114444021	644
ENSMUSG00000048480	protein_coding	Cxcr1	ENSMUST00000053389	protein_coding	principal1	1	-1	74194631	1125
ENSMUSG00000050063	protein_coding	Klk6	ENSMUST00000107968	protein_coding	principal1	7	1	43824499	1394
ENSMUSG00000044308	protein_coding	Ubr3	ENSMUST00000126165	processed_transcript		2	1	69993712	2431
ENSMUSG00000112504	processed_pseudogene	Gm47367	ENSMUST00000219868	processed_pseudogene		10	-1	85767577	1319
ENSMUSG00000029575	protein_coding	Mmab	ENSMUST00000123256	protein_coding		5	-1	114443992	1277
ENSMUSG00000044308	protein_coding	Ubr3	ENSMUST00000125608	processed_transcript		2	1	70000509	365
ENSMUSG00000114415	lincRNA	Gm41030	ENSMUST00000225416	lincRNA		13	-1	97527455	1399
ENSMUSG00000044308	protein_coding	Ubr3	ENSMUST00000150301	processed_transcript		2	1	70009007	559
ENSMUSG00000114837	TEC	Gm48090	ENSMUST00000224270	TEC		13	-1	97543335	1624
ENSMUSG00000027163	protein_coding	Commd9	ENSMUST00000131287	processed_transcript		2	1	101886247	438
ENSMUSG00000036990	protein_coding	Otud4	ENSMUST00000173300	retained_intron		8	1	79651330	722
ENSMUSG00000022295	protein_coding	Atp6v1c1	ENSMUST00000022904	protein_coding	principal1	15	1	38661933	2071
ENSMUSG00000044308	protein_coding	Ubr3	ENSMUST00000136543	processed_transcript		2	1	70020128	608
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000048642	protein_coding	principal1	16	-1	20302387	1348
ENSMUSG00000075155	protein_coding	Olfr1133	ENSMUST00000217368	protein_coding	principal1	2	-1	87647374	993
ENSMUSG00000036990	protein_coding	Otud4	ENSMUST00000173868	retained_intron		8	1	79651742	662
ENSMUSG00000044308	protein_coding	Ubr3	ENSMUST00000123890	processed_transcript		2	1	70020512	1418
ENSMUSG00000028437	protein_coding	Ubap1	ENSMUST00000072866	protein_coding	principal1	4	1	41348996	3456
ENSMUSG00000075155	protein_coding	Olfr1133	ENSMUST00000099855	protein_coding	principal1	2	-1	87646121	942
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000232036	protein_coding		16	-1	20302387	1246
ENSMUSG00000050063	protein_coding	Klk6	ENSMUST00000107966	protein_coding	principal1	7	1	43824558	1095
ENSMUSG00000028437	protein_coding	Ubap1	ENSMUST00000108060	protein_coding		4	1	41348996	2514
ENSMUSG00000025795	protein_coding	Rassf3	ENSMUST00000026902	protein_coding	principal1	10	-1	121476347	3522
ENSMUSG00000110626	lincRNA	Gm45805	ENSMUST00000212695	lincRNA		8	-1	126758334	2066
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000232484	nonsense_mediated_decay		16	-1	20302379	848
ENSMUSG00000036990	protein_coding	Otud4	ENSMUST00000174485	processed_transcript		8	1	79661084	613
ENSMUSG00000028437	protein_coding	Ubap1	ENSMUST00000154529	processed_transcript		4	1	41371248	671
ENSMUSG00000111884	processed_pseudogene	Gm19612	ENSMUST00000218279	processed_pseudogene		10	1	85786456	982
ENSMUSG00000050063	protein_coding	Klk6	ENSMUST00000177514	protein_coding		7	1	43824570	468
ENSMUSG00000044308	protein_coding	Ubr3	ENSMUST00000112251	protein_coding	alternative2	2	1	69897246	8081
ENSMUSG00000028437	protein_coding	Ubap1	ENSMUST00000132235	protein_coding		4	1	41371725	422
ENSMUSG00000112418	processed_pseudogene	Gm9466	ENSMUST00000218144	processed_pseudogene		10	1	85785298	2246
ENSMUSG00000022295	protein_coding	Atp6v1c1	ENSMUST00000228486	processed_transcript		15	1	38661944	390
ENSMUSG00000036990	protein_coding	Otud4	ENSMUST00000172614	retained_intron		8	1	79666823	875
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000155832	retained_intron		16	-1	20283244	502
ENSMUSG00000109939	processed_pseudogene	Gm19232	ENSMUST00000211621	processed_pseudogene		8	-1	99827638	652
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000231547	nonsense_mediated_decay		16	-1	20287039	310
ENSMUSG00000040957	protein_coding	Cables1	ENSMUST00000171109	protein_coding	alternative2	18	1	11839220	3396
ENSMUSG00000028437	protein_coding	Ubap1	ENSMUST00000136705	processed_transcript		4	1	41349048	314
ENSMUSG00000025795	protein_coding	Rassf3	ENSMUST00000219500	processed_transcript		10	-1	121462213	716
ENSMUSG00000110498	lincRNA	A630001O12Rik	ENSMUST00000212914	lincRNA		8	1	126839233	2182
ENSMUSG00000050063	protein_coding	Klk6	ENSMUST00000107967	protein_coding	principal1	7	1	43825395	1172
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000123070	retained_intron		16	-1	20302340	2049
ENSMUSG00000071041	processed_pseudogene	Impdh2-ps	ENSMUST00000120826	processed_pseudogene		8	1	100030558	1545
ENSMUSG00000112539	lincRNA	Gm40787	ENSMUST00000218056	lincRNA		10	1	121488986	317
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000126001	retained_intron		16	-1	20288240	842
ENSMUSG00000022295	protein_coding	Atp6v1c1	ENSMUST00000228475	retained_intron		15	1	38661944	4927
ENSMUSG00000040957	protein_coding	Cables1	ENSMUST00000046948	protein_coding	principal3	18	1	11839274	3202
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000136700	processed_transcript		16	-1	20301329	713
ENSMUSG00000110697	lincRNA	Gm31718	ENSMUST00000212406	lincRNA		8	-1	126876438	1646
ENSMUSG00000022295	protein_coding	Atp6v1c1	ENSMUST00000228820	protein_coding		15	1	38661976	373
ENSMUSG00000018776	protein_coding	Slc35g3	ENSMUST00000102586	protein_coding	principal1	11	-1	69761968	1618
ENSMUSG00000036733	protein_coding	Rbm42	ENSMUST00000108141	protein_coding	alternative2	7	-1	30650144	1526
ENSMUSG00000081383	processed_pseudogene	Gm5742	ENSMUST00000120764	processed_pseudogene		8	1	100060116	505
ENSMUSG00000110697	lincRNA	Gm31718	ENSMUST00000212639	lincRNA		8	-1	126908215	810
ENSMUSG00000022295	protein_coding	Atp6v1c1	ENSMUST00000226487	retained_intron		15	1	38661984	506
ENSMUSG00000110220	processed_pseudogene	Gm45296	ENSMUST00000209625	processed_pseudogene		8	1	100438758	205
ENSMUSG00000018776	protein_coding	Slc35g3	ENSMUST00000231829	protein_coding		11	-1	69761844	1494
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000133153	nonsense_mediated_decay		16	-1	20302354	791
ENSMUSG00000084128	protein_coding	Esrp2	ENSMUST00000115979	protein_coding	principal1	8	-1	106136974	3536
ENSMUSG00000022295	protein_coding	Atp6v1c1	ENSMUST00000226533	nonsense_mediated_decay		15	1	38661988	728
ENSMUSG00000040957	protein_coding	Cables1	ENSMUST00000225430	processed_transcript		18	1	11844300	2447
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000143648	retained_intron		16	-1	20298165	659
ENSMUSG00000033918	protein_coding	Parl	ENSMUST00000153275	retained_intron		16	-1	20302361	356
ENSMUSG00000110014	processed_pseudogene	Gm5361	ENSMUST00000211041	processed_pseudogene		8	1	100636519	1498
ENSMUSG00000111021	protein_coding	Olfr50	ENSMUST00000217041	protein_coding	principal1	2	1	36790538	1507
ENSMUSG00000105421	TEC	5830411K02Rik	ENSMUST00000200000	TEC		5	1	107688171	997
ENSMUSG00000117430	TEC	Gm49968	ENSMUST00000234828	TEC		18	1	11913131	2773
ENSMUSG00000097409	antisense	Gm26832	ENSMUST00000181456	antisense		8	-1	110267462	1282
ENSMUSG00000022295	protein_coding	Atp6v1c1	ENSMUST00000227482	retained_intron		15	1	38675689	569
ENSMUSG00000084128	protein_coding	Esrp2	ENSMUST00000146940	protein_coding		8	-1	106136813	1822
ENSMUSG00000062961	protein_coding	Ccdc177	ENSMUST00000073251	protein_coding	principal1	12	-1	80760687	5775
ENSMUSG00000111021	protein_coding	Olfr50	ENSMUST00000216753	protein_coding	principal1	2	1	36790538	4531
ENSMUSG00000084128	protein_coding	Esrp2	ENSMUST00000142050	processed_transcript		8	-1	106133075	276
ENSMUSG00000031170	protein_coding	Slc38a5	ENSMUST00000115591	protein_coding	alternative2	X	1	8271151	1853
ENSMUSG00000046110	protein_coding	Serinc4	ENSMUST00000110613	protein_coding		2	-1	121456693	2240
ENSMUSG00000027163	protein_coding	Commd9	ENSMUST00000028584	protein_coding	principal1	2	1	101886253	1191
ENSMUSG00000030483	protein_coding	Cyp2b10	ENSMUST00000072438	protein_coding	principal2	7	1	25897620	1916
ENSMUSG00000097575	antisense	Gm26796	ENSMUST00000181092	antisense		12	1	80758406	2276
ENSMUSG00000097440	antisense	Gm6277	ENSMUST00000180860	antisense		18	-1	11839377	1839
ENSMUSG00000111021	protein_coding	Olfr50	ENSMUST00000112950	protein_coding	principal1	2	1	36793020	1157
ENSMUSG00000079169	protein_coding	Gm15130	ENSMUST00000132464	protein_coding	principal1	2	-1	111152936	663
ENSMUSG00000097440	antisense	Gm6277	ENSMUST00000224036	antisense		18	-1	11840869	2779
ENSMUSG00000027163	protein_coding	Commd9	ENSMUST00000133576	retained_intron		2	1	101886260	353
ENSMUSG00000030483	protein_coding	Cyp2b10	ENSMUST00000005477	protein_coding	alternative2	7	1	25897676	1822
ENSMUSG00000027805	protein_coding	Pfn2	ENSMUST00000066882	protein_coding	principal1	3	-1	57848079	2342
ENSMUSG00000027163	protein_coding	Commd9	ENSMUST00000156799	retained_intron		2	1	101886263	322
ENSMUSG00000083716	processed_pseudogene	Gm13436	ENSMUST00000120418	processed_pseudogene		2	-1	36808392	567
ENSMUSG00000030483	protein_coding	Cyp2b10	ENSMUST00000144140	retained_intron		7	1	25916766	499
ENSMUSG00000116706	lincRNA	Gm32431	ENSMUST00000231893	lincRNA		16	1	51051130	642
ENSMUSG00000082357	processed_pseudogene	Gm13542	ENSMUST00000118484	processed_pseudogene		2	-1	25995183	637
ENSMUSG00000117927	lincRNA	Gm50271	ENSMUST00000237878	lincRNA		19	-1	57423494	705
ENSMUSG00000081453	processed_pseudogene	Gm6767	ENSMUST00000118650	processed_pseudogene		16	-1	51363832	1381
ENSMUSG00000100054	lincRNA	Gm28202	ENSMUST00000189780	lincRNA		Y	1	55833464	1157
ENSMUSG00000114875	processed_transcript	Gm30363	ENSMUST00000224850	lincRNA		14	-1	21471421	1040
ENSMUSG00000041297	protein_coding	Cdk13	ENSMUST00000223490	protein_coding	alternative2	13	-1	17805097	12548
ENSMUSG00000075384	protein_coding	Olfr3	ENSMUST00000213988	protein_coding	principal1	2	-1	36817032	2018
ENSMUSG00000114875	processed_transcript	Gm30363	ENSMUST00000225719	retained_intron		14	-1	21473360	4503
ENSMUSG00000019763	protein_coding	Rmnd1	ENSMUST00000042251	protein_coding	principal1	10	-1	4432388	3139
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000143827	nonsense_mediated_decay		10	1	128194719	2176
ENSMUSG00000031170	protein_coding	Slc38a5	ENSMUST00000033512	protein_coding	principal2	X	1	8271381	1868
ENSMUSG00000075384	protein_coding	Olfr3	ENSMUST00000100151	protein_coding	principal1	2	-1	36813090	942
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000123385	processed_transcript		10	1	128194722	246
ENSMUSG00000019763	protein_coding	Rmnd1	ENSMUST00000156940	retained_intron		10	-1	4432344	1772
ENSMUSG00000100054	lincRNA	Gm28202	ENSMUST00000187604	lincRNA		Y	1	55833573	433
ENSMUSG00000036733	protein_coding	Rbm42	ENSMUST00000042726	protein_coding	principal2	7	-1	30650317	1784
ENSMUSG00000100054	lincRNA	Gm28202	ENSMUST00000188183	lincRNA		Y	1	55833573	617
ENSMUSG00000084128	protein_coding	Esrp2	ENSMUST00000131020	retained_intron		8	-1	106134724	1173
ENSMUSG00000031170	protein_coding	Slc38a5	ENSMUST00000115590	protein_coding	alternative2	X	1	8271642	1983
ENSMUSG00000084128	protein_coding	Esrp2	ENSMUST00000139559	retained_intron		8	-1	106134128	721
ENSMUSG00000031786	protein_coding	Drc7	ENSMUST00000058479	protein_coding	principal1	8	1	95055103	2832
ENSMUSG00000027805	protein_coding	Pfn2	ENSMUST00000119344	protein_coding		3	-1	57847145	1879
ENSMUSG00000080801	processed_pseudogene	Gm13310	ENSMUST00000120962	processed_pseudogene		2	-1	12083992	1381
ENSMUSG00000084128	protein_coding	Esrp2	ENSMUST00000139319	retained_intron		8	-1	106134128	531
ENSMUSG00000046650	protein_coding	Olfr1440	ENSMUST00000217062	protein_coding	principal1	19	1	12387279	7484
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000159440	nonsense_mediated_decay		10	1	128194726	2398
ENSMUSG00000046650	protein_coding	Olfr1440	ENSMUST00000216169	processed_transcript		19	1	12387286	5520
ENSMUSG00000046650	protein_coding	Olfr1440	ENSMUST00000213894	nonsense_mediated_decay		19	1	12387288	6399
ENSMUSG00000036733	protein_coding	Rbm42	ENSMUST00000140550	retained_intron		7	-1	30645987	1095
ENSMUSG00000046650	protein_coding	Olfr1440	ENSMUST00000216145	protein_coding	principal1	19	1	12387288	7542
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000134104	nonsense_mediated_decay		10	1	128194748	2197
ENSMUSG00000027805	protein_coding	Pfn2	ENSMUST00000122210	protein_coding		3	-1	57845878	810
ENSMUSG00000046650	protein_coding	Olfr1440	ENSMUST00000214082	processed_transcript		19	1	12387300	5769
ENSMUSG00000046650	protein_coding	Olfr1440	ENSMUST00000213657	protein_coding	principal1	19	1	12387300	7588
ENSMUSG00000041297	protein_coding	Cdk13	ENSMUST00000042365	protein_coding	principal2	13	-1	17804651	5202
ENSMUSG00000046110	protein_coding	Serinc4	ENSMUST00000056312	protein_coding	principal1	2	-1	121456781	2551
ENSMUSG00000105305	processed_pseudogene	Gm8872	ENSMUST00000197475	processed_pseudogene		6	1	70459665	1341
ENSMUSG00000046650	protein_coding	Olfr1440	ENSMUST00000216773	processed_transcript		19	1	12387300	6457
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000152928	retained_intron		10	1	128194806	381
ENSMUSG00000046650	protein_coding	Olfr1440	ENSMUST00000054567	protein_coding	principal1	19	1	12394265	948
ENSMUSG00000019763	protein_coding	Rmnd1	ENSMUST00000131853	protein_coding		10	-1	4432334	430
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000134461	retained_intron		10	1	128203256	717
ENSMUSG00000084128	protein_coding	Esrp2	ENSMUST00000150527	retained_intron		8	-1	106135096	631
ENSMUSG00000027805	protein_coding	Pfn2	ENSMUST00000120289	protein_coding		3	-1	57847549	905
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000145591	processed_transcript		10	1	128203683	576
ENSMUSG00000108552	processed_pseudogene	Gm45227	ENSMUST00000205585	processed_pseudogene		7	1	25950253	169
ENSMUSG00000041297	protein_coding	Cdk13	ENSMUST00000222800	protein_coding	alternative2	13	-1	17801331	3858
ENSMUSG00000084128	protein_coding	Esrp2	ENSMUST00000125955	retained_intron		8	-1	106134941	608
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000135441	retained_intron		10	1	128203764	1529
ENSMUSG00000046110	protein_coding	Serinc4	ENSMUST00000127435	nonsense_mediated_decay		2	-1	121455837	2047
ENSMUSG00000041297	protein_coding	Cdk13	ENSMUST00000222359	retained_intron		13	-1	17739453	972
ENSMUSG00000084128	protein_coding	Esrp2	ENSMUST00000155164	retained_intron		8	-1	106136685	419
ENSMUSG00000050815	protein_coding	Olfr1441	ENSMUST00000214153	protein_coding	principal1	19	1	12417555	2078
ENSMUSG00000019763	protein_coding	Rmnd1	ENSMUST00000126102	protein_coding		10	-1	4432334	468
ENSMUSG00000044005	protein_coding	Gls2	ENSMUST00000132441	protein_coding		10	1	128206925	815
ENSMUSG00000046110	protein_coding	Serinc4	ENSMUST00000140135	nonsense_mediated_decay		2	-1	121455831	1464
ENSMUSG00000031786	protein_coding	Drc7	ENSMUST00000212986	retained_intron		8	1	95055111	1008
ENSMUSG00000019763	protein_coding	Rmnd1	ENSMUST00000148566	retained_intron		10	-1	4432301	672
ENSMUSG00000041297	protein_coding	Cdk13	ENSMUST00000220714	retained_intron		13	-1	17750287	477
ENSMUSG00000050815	protein_coding	Olfr1441	ENSMUST00000216506	protein_coding	principal1	19	1	12417433	2131
ENSMUSG00000070841	protein_coding	Vmn2r34	ENSMUST00000173459	protein_coding	principal1	7	-1	7689513	3699
ENSMUSG00000031786	protein_coding	Drc7	ENSMUST00000212980	retained_intron		8	1	95074079	683
ENSMUSG00000041297	protein_coding	Cdk13	ENSMUST00000222848	retained_intron		13	-1	17803468	1062
ENSMUSG00000046110	protein_coding	Serinc4	ENSMUST00000126678	retained_intron		2	-1	121453753	1059
ENSMUSG00000050815	protein_coding	Olfr1441	ENSMUST00000059033	protein_coding	principal1	19	1	12422265	1088
ENSMUSG00000019763	protein_coding	Rmnd1	ENSMUST00000155172	protein_coding		10	-1	4432295	776
ENSMUSG00000100207	processed_pseudogene	Gm28203	ENSMUST00000190672	processed_pseudogene		Y	-1	55944627	695
ENSMUSG00000041297	protein_coding	Cdk13	ENSMUST00000221775	protein_coding		13	-1	17804647	662
ENSMUSG00000113140	TEC	Gm48624	ENSMUST00000220696	TEC		13	-1	17757325	2810
ENSMUSG00000086390	processed_transcript	1810019D21Rik	ENSMUST00000137995	processed_transcript		8	1	106135400	948
ENSMUSG00000019763	protein_coding	Rmnd1	ENSMUST00000137429	retained_intron		10	-1	4413745	707
ENSMUSG00000100142	unprocessed_pseudogene	Gm21340	ENSMUST00000188010	unprocessed_pseudogene		Y	-1	56018918	696
ENSMUSG00000019763	protein_coding	Rmnd1	ENSMUST00000140660	retained_intron		10	-1	4408105	749
ENSMUSG00000086390	processed_transcript	1810019D21Rik	ENSMUST00000140509	processed_transcript		8	1	106135435	511
ENSMUSG00000100889	unprocessed_pseudogene	Gm28204	ENSMUST00000185934	unprocessed_pseudogene		Y	-1	56048607	614
ENSMUSG00000019763	protein_coding	Rmnd1	ENSMUST00000128434	protein_coding		10	-1	4407918	559
ENSMUSG00000085687	processed_transcript	Gm16153	ENSMUST00000132184	processed_transcript		10	1	4409033	4118
ENSMUSG00000014980	protein_coding	Tsen15	ENSMUST00000015124	protein_coding	principal1	1	-1	152386682	1133
ENSMUSG00000086390	processed_transcript	1810019D21Rik	ENSMUST00000145343	processed_transcript		8	1	106137065	984
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000137953	retained_intron		8	1	84689283	3647
ENSMUSG00000101778	sense_intronic	Gm29488	ENSMUST00000191427	sense_intronic		1	-1	131409213	2402
ENSMUSG00000100619	unprocessed_pseudogene	Gm8446	ENSMUST00000188834	unprocessed_pseudogene		Y	1	1946919	2712
ENSMUSG00000099959	processed_pseudogene	Gm29487	ENSMUST00000190146	processed_pseudogene		1	-1	131447695	256
ENSMUSG00000029712	protein_coding	Actl6b	ENSMUST00000136088	protein_coding		5	1	137553517	508
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000150085	retained_intron		8	1	84689284	665
ENSMUSG00000104060	TEC	Gm37954	ENSMUST00000195400	TEC		1	-1	131378531	2071
ENSMUSG00000100877	unprocessed_pseudogene	Gm28534	ENSMUST00000187744	unprocessed_pseudogene		Y	1	2004144	676
ENSMUSG00000018965	protein_coding	Ywhah	ENSMUST00000019109	protein_coding	principal1	5	1	33018816	1764
ENSMUSG00000014980	protein_coding	Tsen15	ENSMUST00000161717	retained_intron		1	-1	152372082	775
ENSMUSG00000014980	protein_coding	Tsen15	ENSMUST00000162371	protein_coding		1	-1	152386592	431
ENSMUSG00000024273	protein_coding	2700062C07Rik	ENSMUST00000235029	nonsense_mediated_decay		18	1	24470850	1146
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000225748	processed_transcript		19	-1	46317591	1705
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000177364	retained_intron		8	1	84689285	435
ENSMUSG00000014980	protein_coding	Tsen15	ENSMUST00000159270	retained_intron		1	-1	152383745	698
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000175870	processed_transcript		8	1	84689286	421
ENSMUSG00000024273	protein_coding	2700062C07Rik	ENSMUST00000234559	retained_intron		18	1	24470851	1023
ENSMUSG00000018965	protein_coding	Ywhah	ENSMUST00000199651	retained_intron		5	1	33018878	2181
ENSMUSG00000014980	protein_coding	Tsen15	ENSMUST00000159717	retained_intron		1	-1	152384092	651
ENSMUSG00000031902	protein_coding	Nfatc3	ENSMUST00000212936	retained_intron		8	1	106058840	1925
ENSMUSG00000024273	protein_coding	2700062C07Rik	ENSMUST00000234303	processed_transcript		18	1	24470854	356
ENSMUSG00000018965	protein_coding	Ywhah	ENSMUST00000138261	processed_transcript		5	1	33019761	904
ENSMUSG00000020368	protein_coding	Canx	ENSMUST00000020637	protein_coding	principal1	11	-1	50325673	3779
ENSMUSG00000014980	protein_coding	Tsen15	ENSMUST00000163027	processed_transcript		1	-1	152386688	283
ENSMUSG00000018965	protein_coding	Ywhah	ENSMUST00000136667	processed_transcript		5	1	33021791	481
ENSMUSG00000014980	protein_coding	Tsen15	ENSMUST00000188105	retained_intron		1	-1	152386620	2418
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000143427	nonsense_mediated_decay		8	1	84689286	810
ENSMUSG00000024273	protein_coding	2700062C07Rik	ENSMUST00000234955	retained_intron		18	1	24470869	458
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000177423	protein_coding		8	1	84689286	817
ENSMUSG00000086377	processed_pseudogene	4930529C04Rik	ENSMUST00000131367	processed_pseudogene		3	1	91071662	3534
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000077990	processed_transcript		8	1	84689289	895
ENSMUSG00000020368	protein_coding	Canx	ENSMUST00000146979	processed_transcript		11	-1	50299378	708
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000125370	protein_coding	alternative2	8	1	84689464	2114
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000175784	protein_coding		8	1	84689477	840
ENSMUSG00000020368	protein_coding	Canx	ENSMUST00000153068	processed_transcript		11	-1	50298319	234
ENSMUSG00000043733	protein_coding	Ptpn11	ENSMUST00000100770	protein_coding	alternative1	5	-1	121191397	5599
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000177286	processed_transcript		8	1	84689632	864
ENSMUSG00000020368	protein_coding	Canx	ENSMUST00000155801	processed_transcript		11	-1	50300990	600
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000128022	processed_transcript		8	1	84690389	904
ENSMUSG00000070509	protein_coding	Rgma	ENSMUST00000119206	protein_coding		7	1	73375509	3481
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000148118	retained_intron		8	1	84694922	846
ENSMUSG00000020368	protein_coding	Canx	ENSMUST00000179865	protein_coding	principal1	11	-1	50325673	4281
ENSMUSG00000027246	protein_coding	Ell3	ENSMUST00000028679	protein_coding	principal1	2	-1	121444278	2115
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000138300	retained_intron		8	1	84696843	463
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000115205	protein_coding	alternative1	16	1	31663443	6143
ENSMUSG00000042682	protein_coding	Selenok	ENSMUST00000112268	protein_coding	principal1	14	1	29968308	1678
ENSMUSG00000027246	protein_coding	Ell3	ENSMUST00000153866	retained_intron		2	-1	121441151	407
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000175884	nonsense_mediated_decay		8	1	84697115	505
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000115201	protein_coding		16	1	31663909	3248
ENSMUSG00000042682	protein_coding	Selenok	ENSMUST00000223998	nonsense_mediated_decay		14	1	29968428	799
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000175704	retained_intron		8	1	84697321	462
ENSMUSG00000042682	protein_coding	Selenok	ENSMUST00000133229	processed_transcript		14	1	29968436	513
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000136423	protein_coding		8	1	84698398	638
ENSMUSG00000027246	protein_coding	Ell3	ENSMUST00000116432	protein_coding	principal1	2	-1	121442601	1674
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000132058	retained_intron		5	1	3928054	3646
ENSMUSG00000111926	lincRNA	Gm46204	ENSMUST00000219800	lincRNA		10	1	121505351	411
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000175767	retained_intron		8	1	84699071	502
ENSMUSG00000043733	protein_coding	Ptpn11	ENSMUST00000148407	retained_intron		5	-1	121191367	7442
ENSMUSG00000001909	protein_coding	Trmt1	ENSMUST00000177260	retained_intron		8	1	84699181	339
ENSMUSG00000118419	unprocessed_pseudogene	Gm50454	ENSMUST00000238643	unprocessed_pseudogene		10	-1	121532376	108
ENSMUSG00000112527	lincRNA	Gm35696	ENSMUST00000220364	lincRNA		10	1	121506623	778
ENSMUSG00000038260	protein_coding	Trpm4	ENSMUST00000211431	nonsense_mediated_decay		7	-1	45333768	4315
ENSMUSG00000112527	lincRNA	Gm35696	ENSMUST00000218852	lincRNA		10	1	121510398	423
ENSMUSG00000104730	processed_pseudogene	Gm42511	ENSMUST00000196160	processed_pseudogene		3	1	57942918	234
ENSMUSG00000024273	protein_coding	2700062C07Rik	ENSMUST00000097646	protein_coding	principal1	18	1	24470869	1065
ENSMUSG00000044707	protein_coding	Ccnjl	ENSMUST00000050574	protein_coding	principal1	11	1	43528784	2672
ENSMUSG00000105003	lincRNA	Gm40055	ENSMUST00000196091	lincRNA		3	-1	57958225	2742
ENSMUSG00000111763	lincRNA	Gm34973	ENSMUST00000217087	lincRNA		9	1	15381367	572
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000162816	nonsense_mediated_decay		17	-1	44736176	2818
ENSMUSG00000111823	processed_pseudogene	Gm2517	ENSMUST00000215651	processed_pseudogene		9	-1	15424614	348
ENSMUSG00000049588	protein_coding	Ccdc69	ENSMUST00000055040	protein_coding	principal2	11	-1	55078107	1402
ENSMUSG00000106246	processed_pseudogene	Gm18867	ENSMUST00000198022	processed_pseudogene		3	1	57962194	1179
ENSMUSG00000044707	protein_coding	Ccnjl	ENSMUST00000152153	processed_transcript		11	1	43529246	349
ENSMUSG00000111508	processed_pseudogene	Gm48634	ENSMUST00000214794	processed_pseudogene		9	-1	15440471	477
ENSMUSG00000105065	TEC	Gm42513	ENSMUST00000197831	TEC		3	1	58079716	2119
ENSMUSG00000069008	processed_pseudogene	Gm5537	ENSMUST00000091117	processed_pseudogene		3	-1	58104247	1252
ENSMUSG00000085239	antisense	Gm12150	ENSMUST00000130874	antisense		11	-1	43581116	468
ENSMUSG00000101330	processed_pseudogene	Gm10193	ENSMUST00000188288	processed_pseudogene		1	1	105764444	231
ENSMUSG00000049588	protein_coding	Ccdc69	ENSMUST00000108880	protein_coding	alternative2	11	-1	55078131	1020
ENSMUSG00000043733	protein_coding	Ptpn11	ENSMUST00000054547	protein_coding	principal3	5	-1	121191329	5535
ENSMUSG00000106315	IG_V_pseudogene	Gm42720	ENSMUST00000196813	IG_V_pseudogene		6	-1	70493663	300
ENSMUSG00000043733	protein_coding	Ptpn11	ENSMUST00000148871	processed_transcript		5	-1	121143635	737
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000032192	protein_coding	principal2	6	1	108213096	9870
ENSMUSG00000070509	protein_coding	Rgma	ENSMUST00000094312	protein_coding	principal2	7	1	73375520	3586
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000132176	nonsense_mediated_decay		16	1	31663955	4545
ENSMUSG00000100666	lincRNA	1700007F19Rik	ENSMUST00000188418	lincRNA		3	-1	58163807	1642
ENSMUSG00000046010	protein_coding	Zfp830	ENSMUST00000056677	protein_coding	principal1	11	1	82764345	1591
ENSMUSG00000058173	protein_coding	Smco4	ENSMUST00000215907	protein_coding	principal1	9	1	15493432	994
ENSMUSG00000041583	protein_coding	Obox6	ENSMUST00000108513	protein_coding	principal1	7	-1	15839678	1344
ENSMUSG00000104586	lincRNA	4921539H07Rik	ENSMUST00000197200	lincRNA		3	1	58117053	2985
ENSMUSG00000070509	protein_coding	Rgma	ENSMUST00000128471	protein_coding		7	1	73391160	378
ENSMUSG00000104586	lincRNA	4921539H07Rik	ENSMUST00000200072	lincRNA		3	1	58163932	1665
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000203615	protein_coding	alternative1	6	1	108213202	9761
ENSMUSG00000070509	protein_coding	Rgma	ENSMUST00000139780	protein_coding	alternative2	7	1	73391227	3371
ENSMUSG00000070509	protein_coding	Rgma	ENSMUST00000206253	retained_intron		7	1	73391276	1972
ENSMUSG00000058173	protein_coding	Smco4	ENSMUST00000045620	protein_coding	principal1	9	1	15505487	954
ENSMUSG00000058173	protein_coding	Smco4	ENSMUST00000178999	protein_coding	principal1	9	1	15520859	820
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000064477	protein_coding	principal3	16	1	31664039	4663
ENSMUSG00000041698	protein_coding	Slco1a1	ENSMUST00000168119	protein_coding	alternative2	6	-1	141946810	3904
ENSMUSG00000097756	antisense	A730056A06Rik	ENSMUST00000181299	antisense		7	-1	73375765	2689
ENSMUSG00000062248	protein_coding	Cks2	ENSMUST00000075853	protein_coding	principal1	13	1	51645232	692
ENSMUSG00000097756	antisense	A730056A06Rik	ENSMUST00000206959	antisense		7	-1	73375774	526
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000023454	protein_coding		16	1	31664150	3725
ENSMUSG00000104692	unprocessed_pseudogene	Gm42773	ENSMUST00000196962	unprocessed_pseudogene		6	1	70495383	148
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000203995	retained_intron		6	1	108252958	3509
ENSMUSG00000105862	IG_V_pseudogene	Igkv3-12-1	ENSMUST00000197093	IG_V_pseudogene		6	-1	70498273	351
ENSMUSG00000040340	protein_coding	Tex45	ENSMUST00000159076	nonsense_mediated_decay		8	1	3470862	1608
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000203936	protein_coding		6	1	108356254	647
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000155958	retained_intron		16	1	31684266	2225
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000212125	nonsense_mediated_decay		6	1	108387434	1462
ENSMUSG00000001910	protein_coding	Nacc1	ENSMUST00000001975	protein_coding	principal1	8	-1	84687902	4344
ENSMUSG00000108530	lincRNA	4930429H19Rik	ENSMUST00000205260	lincRNA		7	1	73310380	1818
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000115196	protein_coding		16	1	31754350	3418
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000205053	retained_intron		6	1	108415270	2802
ENSMUSG00000094117	IG_V_gene	Igkv3-12	ENSMUST00000103396	IG_V_gene	principal1	6	1	70518250	359
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000203262	protein_coding		6	1	108416804	675
ENSMUSG00000108530	lincRNA	4930429H19Rik	ENSMUST00000205600	lincRNA		7	1	73310530	484
ENSMUSG00000041698	protein_coding	Slco1a1	ENSMUST00000042119	protein_coding	principal2	6	-1	141946962	3395
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000131136	protein_coding		16	1	31791771	1073
ENSMUSG00000108678	TEC	Gm44758	ENSMUST00000206096	TEC		7	1	73404350	2068
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000203638	protein_coding		6	1	108416871	939
ENSMUSG00000082527	processed_pseudogene	Gm8200	ENSMUST00000122390	processed_pseudogene		5	1	103989370	222
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000137322	retained_intron		16	1	31829299	572
ENSMUSG00000001910	protein_coding	Nacc1	ENSMUST00000238434	protein_coding		8	-1	84676995	1117
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000203687	protein_coding		6	1	108417877	454
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000130920	nonsense_mediated_decay		16	1	31836270	678
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000205048	processed_transcript		6	1	108458703	356
ENSMUSG00000040340	protein_coding	Tex45	ENSMUST00000161680	protein_coding	principal1	8	1	3475849	1526
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000143365	protein_coding		5	1	3928178	2010
ENSMUSG00000114554	lincRNA	5430425K12Rik	ENSMUST00000225352	lincRNA		13	1	80940411	934
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000147382	processed_transcript		16	1	31838159	470
ENSMUSG00000001910	protein_coding	Nacc1	ENSMUST00000238301	protein_coding		8	-1	84687153	784
ENSMUSG00000114554	lincRNA	5430425K12Rik	ENSMUST00000224538	lincRNA		13	1	80941059	973
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000141817	retained_intron		5	1	3928274	491
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000203530	retained_intron		6	1	108493802	619
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000155847	retained_intron		16	1	31847323	567
ENSMUSG00000041698	protein_coding	Slco1a1	ENSMUST00000171651	retained_intron		6	-1	141946816	2669
ENSMUSG00000114554	lincRNA	5430425K12Rik	ENSMUST00000224509	lincRNA		13	1	80941086	346
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000138213	retained_intron		16	1	31853651	596
ENSMUSG00000112318	processed_pseudogene	Gm6721	ENSMUST00000218353	processed_pseudogene		10	1	85807809	1445
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000203288	retained_intron		6	1	108508313	4618
ENSMUSG00000001910	protein_coding	Nacc1	ENSMUST00000238449	protein_coding		8	-1	84687591	792
ENSMUSG00000030102	protein_coding	Itpr1	ENSMUST00000205005	retained_intron		6	1	108518732	486
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000140258	retained_intron		16	1	31867482	615
ENSMUSG00000040340	protein_coding	Tex45	ENSMUST00000047265	protein_coding	principal1	8	1	3470862	1613
ENSMUSG00000108219	TEC	Gm44101	ENSMUST00000203951	TEC		6	-1	108472575	2221
ENSMUSG00000101605	protein_coding	Ace3	ENSMUST00000190995	protein_coding	principal1	11	1	105994675	2214
ENSMUSG00000001910	protein_coding	Nacc1	ENSMUST00000238687	protein_coding		8	-1	84687591	403
ENSMUSG00000107458	antisense	Gm44040	ENSMUST00000203360	antisense		6	-1	108525687	545
ENSMUSG00000112826	lincRNA	Gm1559	ENSMUST00000219596	lincRNA		10	-1	85810887	3117
ENSMUSG00000026321	protein_coding	Tnfrsf11a	ENSMUST00000027559	protein_coding	principal1	1	1	105780718	5027
ENSMUSG00000090112	protein_coding	Shprh	ENSMUST00000044053	protein_coding	principal4	10	1	11149430	9271
ENSMUSG00000075514	antisense	Gm13375	ENSMUST00000126967	antisense		2	1	20969054	854
ENSMUSG00000000385	protein_coding	Tmprss2	ENSMUST00000000395	protein_coding	principal1	16	-1	97611195	3161
ENSMUSG00000112643	processed_pseudogene	Gm19688	ENSMUST00000218652	processed_pseudogene		10	-1	75619503	424
ENSMUSG00000051456	protein_coding	Hspb3	ENSMUST00000054650	protein_coding	principal1	13	-1	113663676	781
ENSMUSG00000029712	protein_coding	Actl6b	ENSMUST00000139395	protein_coding	principal1	5	1	137553520	1592
ENSMUSG00000022770	protein_coding	Dlg1	ENSMUST00000100001	protein_coding	alternative1	16	1	31663935	4711
ENSMUSG00000026321	protein_coding	Tnfrsf11a	ENSMUST00000187812	retained_intron		1	1	105780750	1041
ENSMUSG00000081515	processed_pseudogene	Gm12311	ENSMUST00000118803	processed_pseudogene		11	-1	70129342	374
ENSMUSG00000090112	protein_coding	Shprh	ENSMUST00000161858	retained_intron		10	1	11149473	3028
ENSMUSG00000000594	protein_coding	Gm2a	ENSMUST00000000608	protein_coding	principal1	11	1	55098115	4127
ENSMUSG00000026321	protein_coding	Tnfrsf11a	ENSMUST00000187658	retained_intron		1	1	105819870	611
ENSMUSG00000029712	protein_coding	Actl6b	ENSMUST00000145500	retained_intron		5	1	137553538	405
ENSMUSG00000116781	TEC	Gm49712	ENSMUST00000232316	TEC		16	1	31679241	1369
ENSMUSG00000116626	TEC	Gm49705	ENSMUST00000232512	TEC		16	1	31760966	5219
ENSMUSG00000111747	protein_coding	Olfr1134	ENSMUST00000135875	protein_coding	principal1	2	-1	87658460	1291
ENSMUSG00000116778	processed_pseudogene	Gm49713	ENSMUST00000231752	processed_pseudogene		16	-1	31812611	770
ENSMUSG00000000385	protein_coding	Tmprss2	ENSMUST00000231908	retained_intron		16	-1	97611188	5503
ENSMUSG00000103533	processed_pseudogene	Gm18493	ENSMUST00000192084	processed_pseudogene		3	1	20804475	1612
ENSMUSG00000111747	protein_coding	Olfr1134	ENSMUST00000213939	protein_coding	principal1	2	-1	87656942	1015
ENSMUSG00000000385	protein_coding	Tmprss2	ENSMUST00000232599	retained_intron		16	-1	97567337	380
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000224556	protein_coding		19	-1	46318091	2034
ENSMUSG00000095869	processed_pseudogene	Ppp1r2-ps6	ENSMUST00000179333	processed_pseudogene		17	1	6253903	621
ENSMUSG00000000385	protein_coding	Tmprss2	ENSMUST00000231715	retained_intron		16	-1	97570545	475
ENSMUSG00000090112	protein_coding	Shprh	ENSMUST00000054814	protein_coding	alternative2	10	1	11149524	7225
ENSMUSG00000102807	TEC	Gm37480	ENSMUST00000194795	TEC		3	1	20819621	550
ENSMUSG00000029712	protein_coding	Actl6b	ENSMUST00000198601	nonsense_mediated_decay		5	1	137553538	689
ENSMUSG00000000385	protein_coding	Tmprss2	ENSMUST00000231544	nonsense_mediated_decay		16	-1	97590901	391
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000114318	protein_coding	alternative2	2	-1	25319095	3920
ENSMUSG00000090112	protein_coding	Shprh	ENSMUST00000159541	protein_coding	alternative2	10	1	11149524	6679
ENSMUSG00000029712	protein_coding	Actl6b	ENSMUST00000136565	protein_coding		5	1	137553539	633
ENSMUSG00000047632	protein_coding	Fgfbp3	ENSMUST00000057337	protein_coding	alternative2	19	-1	36919615	1772
ENSMUSG00000000385	protein_coding	Tmprss2	ENSMUST00000232141	protein_coding		16	-1	97610969	695
ENSMUSG00000111747	protein_coding	Olfr1134	ENSMUST00000099857	protein_coding	principal1	2	-1	87658457	1102
ENSMUSG00000117622	processed_pseudogene	Gm20026	ENSMUST00000234141	processed_pseudogene		17	1	26232564	318
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000238400	protein_coding		17	-1	44814226	1800
ENSMUSG00000117513	processed_pseudogene	Gm3946	ENSMUST00000234719	processed_pseudogene		17	1	26223711	844
ENSMUSG00000029712	protein_coding	Actl6b	ENSMUST00000149292	protein_coding		5	1	137553555	471
ENSMUSG00000040446	protein_coding	Rprd1a	ENSMUST00000046206	protein_coding	principal1	18	-1	24530204	4299
ENSMUSG00000047632	protein_coding	Fgfbp3	ENSMUST00000238948	protein_coding	principal2	19	-1	36919599	1756
ENSMUSG00000029712	protein_coding	Actl6b	ENSMUST00000125489	protein_coding		5	1	137553555	432
ENSMUSG00000090112	protein_coding	Shprh	ENSMUST00000160461	nonsense_mediated_decay		10	1	11164345	945
ENSMUSG00000029712	protein_coding	Actl6b	ENSMUST00000196154	retained_intron		5	1	137553557	3100
ENSMUSG00000105499	IG_V_pseudogene	Igkv3-11	ENSMUST00000197500	IG_V_pseudogene		6	1	70553239	385
ENSMUSG00000029712	protein_coding	Actl6b	ENSMUST00000031725	nonsense_mediated_decay		5	1	137553557	1549
ENSMUSG00000086003	processed_transcript	B230206L02Rik	ENSMUST00000132584	processed_transcript		11	1	94133485	695
ENSMUSG00000086003	processed_transcript	B230206L02Rik	ENSMUST00000155965	processed_transcript		11	1	94133502	473
ENSMUSG00000114417	lincRNA	Gm34586	ENSMUST00000223766	lincRNA		13	1	113672318	927
ENSMUSG00000091175	protein_coding	S100a7l2	ENSMUST00000166173	protein_coding	principal1	3	-1	91090803	489
ENSMUSG00000044751	processed_pseudogene	Atp5pb-ps	ENSMUST00000119447	processed_pseudogene		11	-1	55118795	695
ENSMUSG00000028063	protein_coding	Lmna	ENSMUST00000147537	retained_intron		3	-1	88484607	3948
ENSMUSG00000086003	processed_transcript	B230206L02Rik	ENSMUST00000125406	processed_transcript		11	1	94135660	524
ENSMUSG00000075153	protein_coding	Olfr1135	ENSMUST00000213835	protein_coding	principal1	2	-1	87673664	2648
ENSMUSG00000080738	processed_pseudogene	Mup-ps22	ENSMUST00000121611	processed_pseudogene		11	1	55123695	243
ENSMUSG00000082097	processed_pseudogene	Gm14039	ENSMUST00000118705	processed_pseudogene		2	-1	129362859	101
ENSMUSG00000039617	processed_pseudogene	Gm7488	ENSMUST00000117148	processed_pseudogene		3	1	21049565	684
ENSMUSG00000106051	processed_pseudogene	Gm43160	ENSMUST00000196453	processed_pseudogene		3	-1	21114003	421
ENSMUSG00000075153	protein_coding	Olfr1135	ENSMUST00000099853	protein_coding	principal1	2	-1	87672365	933
ENSMUSG00000076596	IG_V_gene	Igkv3-10	ENSMUST00000196940	IG_V_gene	principal5	6	1	70572633	359
ENSMUSG00000101897	lincRNA	Gm29137	ENSMUST00000190301	lincRNA		3	-1	21269090	520
ENSMUSG00000040446	protein_coding	Rprd1a	ENSMUST00000234721	retained_intron		18	-1	24530094	1961
ENSMUSG00000114962	processed_pseudogene	Gm6343	ENSMUST00000225360	processed_pseudogene		13	-1	113762128	743
ENSMUSG00000076596	IG_V_gene	Igkv3-10	ENSMUST00000103397	IG_V_gene	alternative2	6	1	70572633	356
ENSMUSG00000040446	protein_coding	Rprd1a	ENSMUST00000234403	retained_intron		18	-1	24530058	2950
ENSMUSG00000082826	processed_pseudogene	Mif-ps3	ENSMUST00000118636	processed_pseudogene		3	1	92024567	345
ENSMUSG00000090112	protein_coding	Shprh	ENSMUST00000159553	retained_intron		10	1	11166457	3467
ENSMUSG00000095338	IG_V_gene	Igkv3-9	ENSMUST00000103398	IG_V_gene	principal1	6	1	70588189	359
ENSMUSG00000090112	protein_coding	Shprh	ENSMUST00000161910	retained_intron		10	1	11205019	2857
ENSMUSG00000104760	IG_V_pseudogene	Igkv3-8	ENSMUST00000197635	IG_V_pseudogene		6	1	70588875	339
ENSMUSG00000090070	antisense	Gm16577	ENSMUST00000161579	antisense		10	-1	11212979	471
ENSMUSG00000047264	protein_coding	Zfp358	ENSMUST00000061508	protein_coding	principal1	8	1	3493138	1999
ENSMUSG00000076598	IG_V_gene	Igkv3-7	ENSMUST00000197560	IG_V_gene		6	1	70607437	359
ENSMUSG00000031902	protein_coding	Nfatc3	ENSMUST00000212742	protein_coding	alternative2	8	1	106058840	3207
ENSMUSG00000076598	IG_V_gene	Igkv3-7	ENSMUST00000103399	IG_V_gene	principal1	6	1	70607738	299
ENSMUSG00000037573	protein_coding	Tob1	ENSMUST00000041589	protein_coding	principal1	11	1	94211454	2288
ENSMUSG00000031902	protein_coding	Nfatc3	ENSMUST00000211991	protein_coding	alternative2	8	1	106058840	3712
ENSMUSG00000022519	protein_coding	Srl	ENSMUST00000090500	protein_coding	principal1	16	-1	4523075	3698
ENSMUSG00000031902	protein_coding	Nfatc3	ENSMUST00000212577	retained_intron		8	1	106059633	2207
ENSMUSG00000097098	antisense	9330111N05Rik	ENSMUST00000181043	antisense		13	1	80962888	2449
ENSMUSG00000047264	protein_coding	Zfp358	ENSMUST00000207318	protein_coding		8	1	3493170	682
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000113572	protein_coding	alternative2	17	-1	44736648	6463
ENSMUSG00000047264	protein_coding	Zfp358	ENSMUST00000208423	protein_coding	principal1	8	1	3495009	2200
ENSMUSG00000097098	antisense	9330111N05Rik	ENSMUST00000180409	antisense		13	1	80964074	1407
ENSMUSG00000097098	antisense	9330111N05Rik	ENSMUST00000225082	antisense		13	1	80981144	580
ENSMUSG00000097098	antisense	9330111N05Rik	ENSMUST00000181508	antisense		13	1	80981144	1848
ENSMUSG00000097098	antisense	9330111N05Rik	ENSMUST00000223730	antisense		13	1	81051181	337
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000162878	protein_coding		17	-1	44735710	2987
ENSMUSG00000114939	TEC	Gm48566	ENSMUST00000225657	TEC		13	-1	81240784	1608
ENSMUSG00000086821	unprocessed_pseudogene	Gm13377	ENSMUST00000137984	unprocessed_pseudogene		2	-1	21141954	683
ENSMUSG00000114801	processed_pseudogene	Gm48549	ENSMUST00000225685	processed_pseudogene		13	-1	81016560	198
ENSMUSG00000031902	protein_coding	Nfatc3	ENSMUST00000109308	protein_coding	principal2	8	1	106059633	5984
ENSMUSG00000087219	lincRNA	Gm13376	ENSMUST00000128743	lincRNA		2	1	21097099	448
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000159943	protein_coding	principal3	17	-1	44814581	2316
ENSMUSG00000114479	lincRNA	Gm49375	ENSMUST00000223992	lincRNA		13	1	80979470	3040
ENSMUSG00000114836	transcribed_processed_pseudogene	Gm18517	ENSMUST00000223708	processed_transcript		13	-1	81087314	1924
ENSMUSG00000042244	protein_coding	Pglyrp3	ENSMUST00000047660	protein_coding	principal1	3	1	92014583	1107
ENSMUSG00000114836	transcribed_processed_pseudogene	Gm18517	ENSMUST00000224010	transcribed_processed_pseudogene		13	-1	81087564	808
ENSMUSG00000111740	TEC	Gm49783	ENSMUST00000213901	TEC		10	-1	92723688	6181
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000114310	protein_coding	alternative2	2	-1	25319095	4276
ENSMUSG00000031902	protein_coding	Nfatc3	ENSMUST00000212691	retained_intron		8	1	106095175	2863
ENSMUSG00000111432	processed_pseudogene	Gm47993	ENSMUST00000217587	processed_pseudogene		10	-1	92706257	175
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000114308	protein_coding		2	-1	25319095	4165
ENSMUSG00000114454	processed_pseudogene	Gm48567	ENSMUST00000224788	processed_pseudogene		13	1	81500802	655
ENSMUSG00000083075	processed_pseudogene	Gm11980	ENSMUST00000121445	processed_pseudogene		11	1	6685824	986
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000172057	protein_coding	alternative2	1	-1	156939602	6863
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000114317	protein_coding	alternative2	2	-1	25319095	3809
ENSMUSG00000031902	protein_coding	Nfatc3	ENSMUST00000212671	retained_intron		8	1	106098765	2721
ENSMUSG00000022519	protein_coding	Srl	ENSMUST00000023161	protein_coding		16	-1	4523075	5000
ENSMUSG00000081285	processed_pseudogene	Gm18859	ENSMUST00000118792	processed_pseudogene		13	1	17820946	825
ENSMUSG00000093904	protein_coding	Tomm20	ENSMUST00000179857	protein_coding	principal1	8	-1	126945840	4902
ENSMUSG00000095979	protein_coding	Gm21209	ENSMUST00000189354	protein_coding	principal5	Y	1	49571156	922
ENSMUSG00000095979	protein_coding	Gm21209	ENSMUST00000178556	protein_coding	alternative2	Y	1	49572579	567
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000162373	protein_coding	alternative2	17	-1	44735634	1565
ENSMUSG00000022519	protein_coding	Srl	ENSMUST00000133440	processed_transcript		16	-1	4541816	366
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000162629	protein_coding	alternative2	17	-1	44814226	1607
ENSMUSG00000100564	unprocessed_pseudogene	Gm28682	ENSMUST00000187430	unprocessed_pseudogene		Y	-1	49659233	696
ENSMUSG00000022519	protein_coding	Srl	ENSMUST00000132284	retained_intron		16	-1	4523063	349
ENSMUSG00000035798	protein_coding	Zdhhc17	ENSMUST00000041723	protein_coding	principal1	10	-1	111010066	4548
ENSMUSG00000093904	protein_coding	Tomm20	ENSMUST00000212771	protein_coding		8	-1	126945844	458
ENSMUSG00000022519	protein_coding	Srl	ENSMUST00000230817	processed_transcript		16	-1	4541814	353
ENSMUSG00000114901	processed_pseudogene	Gm47462	ENSMUST00000226061	processed_pseudogene		13	1	113764112	166
ENSMUSG00000083585	processed_pseudogene	Gm15885	ENSMUST00000122114	processed_pseudogene		16	1	4539308	388
ENSMUSG00000114781	processed_pseudogene	Gm47463	ENSMUST00000225989	processed_pseudogene		13	1	113764615	307
ENSMUSG00000114395	processed_pseudogene	Gm47464	ENSMUST00000224943	processed_pseudogene		13	-1	113791777	226
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000160673	protein_coding	alternative2	17	-1	44814627	1791
ENSMUSG00000004937	protein_coding	Sgta	ENSMUST00000005067	protein_coding	principal2	10	-1	81060178	1969
ENSMUSG00000086808	processed_transcript	Gm11981	ENSMUST00000139769	processed_transcript		11	-1	6720037	664
ENSMUSG00000080833	processed_pseudogene	Gm11976	ENSMUST00000119236	processed_pseudogene		11	-1	6719495	295
ENSMUSG00000003812	protein_coding	Dnase2a	ENSMUST00000003910	protein_coding	principal2	8	1	84908560	1715
ENSMUSG00000086017	antisense	Gm11872	ENSMUST00000141819	antisense		4	1	20343706	2219
ENSMUSG00000003812	protein_coding	Dnase2a	ENSMUST00000109744	protein_coding	alternative2	8	1	84908560	1958
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000028335	protein_coding	principal3	2	-1	25319120	4238
ENSMUSG00000087137	lincRNA	4930509K18Rik	ENSMUST00000144039	lincRNA		4	1	40313232	1810
ENSMUSG00000021357	protein_coding	Exoc2	ENSMUST00000102946	protein_coding	principal1	13	-1	30950298	4375
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000113568	nonsense_mediated_decay		17	-1	44814797	1479
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000114314	protein_coding	alternative1	2	-1	25319120	3882
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000162130	protein_coding		17	-1	44735366	693
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000114307	protein_coding		2	-1	25319120	4127
ENSMUSG00000004937	protein_coding	Sgta	ENSMUST00000218208	protein_coding	alternative1	10	-1	81060178	1964
ENSMUSG00000041836	protein_coding	Ptpre	ENSMUST00000211140	protein_coding	principal3	7	1	135537481	5753
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000160199	protein_coding		17	-1	44734693	440
ENSMUSG00000003812	protein_coding	Dnase2a	ENSMUST00000155942	retained_intron		8	1	84908647	440
ENSMUSG00000059854	protein_coding	Hydin	ENSMUST00000043141	protein_coding	principal1	8	1	110266977	15783
ENSMUSG00000041836	protein_coding	Ptpre	ENSMUST00000209268	processed_transcript		7	1	135537824	3372
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000160672	nonsense_mediated_decay		17	-1	44814264	408
ENSMUSG00000003812	protein_coding	Dnase2a	ENSMUST00000153215	retained_intron		8	1	84908647	614
ENSMUSG00000021357	protein_coding	Exoc2	ENSMUST00000021785	protein_coding	principal1	13	-1	30974054	4256
ENSMUSG00000041836	protein_coding	Ptpre	ENSMUST00000073961	protein_coding	principal3	7	1	135537824	5410
ENSMUSG00000003812	protein_coding	Dnase2a	ENSMUST00000145292	protein_coding		8	1	84908690	678
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000114312	protein_coding	alternative2	2	-1	25319187	3838
ENSMUSG00000004937	protein_coding	Sgta	ENSMUST00000219126	retained_intron		10	-1	81050048	698
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000161489	retained_intron		17	-1	44814627	558
ENSMUSG00000004937	protein_coding	Sgta	ENSMUST00000219297	retained_intron		10	-1	81049874	693
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000041391	protein_coding	principal3	19	-1	46327156	3900
ENSMUSG00000004937	protein_coding	Sgta	ENSMUST00000219401	protein_coding		10	-1	81060115	869
ENSMUSG00000021357	protein_coding	Exoc2	ENSMUST00000221678	retained_intron		13	-1	30925829	688
ENSMUSG00000003812	protein_coding	Dnase2a	ENSMUST00000128400	processed_transcript		8	1	84908721	4073
ENSMUSG00000039153	protein_coding	Runx2	ENSMUST00000113571	protein_coding	principal3	17	-1	44814797	5898
ENSMUSG00000041836	protein_coding	Ptpre	ENSMUST00000209256	protein_coding		7	1	135537839	2593
ENSMUSG00000003812	protein_coding	Dnase2a	ENSMUST00000134569	protein_coding		8	1	84908731	590
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000127171	processed_transcript		2	-1	25303785	527
ENSMUSG00000021357	protein_coding	Exoc2	ENSMUST00000220490	processed_transcript		13	-1	30925848	543
ENSMUSG00000117326	processed_pseudogene	4930564C03Rik	ENSMUST00000233907	processed_pseudogene		17	-1	44880295	526
ENSMUSG00000004937	protein_coding	Sgta	ENSMUST00000220317	protein_coding		10	-1	81060144	775
ENSMUSG00000003812	protein_coding	Dnase2a	ENSMUST00000135219	processed_transcript		8	1	84909835	389
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000135426	processed_transcript		2	-1	25296679	456
ENSMUSG00000041836	protein_coding	Ptpre	ENSMUST00000211788	protein_coding		7	1	135593388	2331
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000225323	protein_coding	alternative2	19	-1	46325001	3398
ENSMUSG00000004937	protein_coding	Sgta	ENSMUST00000220202	retained_intron		10	-1	81060181	642
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000153465	processed_transcript		2	-1	25305100	634
ENSMUSG00000003812	protein_coding	Dnase2a	ENSMUST00000148573	processed_transcript		8	1	84913391	1118
ENSMUSG00000059854	protein_coding	Hydin	ENSMUST00000212218	retained_intron		8	1	110266991	5330
ENSMUSG00000041836	protein_coding	Ptpre	ENSMUST00000210833	protein_coding	principal3	7	1	135605828	2209
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000226062	retained_intron		19	-1	46314304	735
ENSMUSG00000055761	protein_coding	Nkain3	ENSMUST00000119374	protein_coding	principal1	4	-1	20778567	4567
ENSMUSG00000059854	protein_coding	Hydin	ENSMUST00000212034	retained_intron		8	1	110444489	1267
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000224094	retained_intron		19	-1	46325586	3860
ENSMUSG00000021357	protein_coding	Exoc2	ENSMUST00000222133	retained_intron		13	-1	30974093	1787
ENSMUSG00000110235	lincRNA	Gm5086	ENSMUST00000210827	lincRNA		13	1	97559971	1043
ENSMUSG00000041836	protein_coding	Ptpre	ENSMUST00000209979	protein_coding	alternative1	7	1	135651937	4959
ENSMUSG00000092246	processed_pseudogene	Gm20493	ENSMUST00000173706	processed_pseudogene		17	-1	34133614	392
ENSMUSG00000021357	protein_coding	Exoc2	ENSMUST00000220532	retained_intron		13	-1	30974068	1441
ENSMUSG00000110235	lincRNA	Gm5086	ENSMUST00000210022	lincRNA		13	1	97560000	1297
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000153551	processed_transcript		2	-1	25305397	731
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000225770	retained_intron		19	-1	46324059	722
ENSMUSG00000110235	lincRNA	Gm5086	ENSMUST00000210897	lincRNA		13	1	97560026	1136
ENSMUSG00000021357	protein_coding	Exoc2	ENSMUST00000223216	retained_intron		13	-1	30974057	639
ENSMUSG00000081163	unprocessed_pseudogene	Defa-ps12	ENSMUST00000122353	unprocessed_pseudogene		8	1	19210462	193
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000224447	protein_coding		19	-1	46327128	445
ENSMUSG00000055761	protein_coding	Nkain3	ENSMUST00000102998	protein_coding		4	-1	20778866	3098
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000155627	processed_transcript		2	-1	25319126	3437
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000225781	protein_coding		19	-1	46326506	443
ENSMUSG00000026959	protein_coding	Grin1	ENSMUST00000144402	processed_transcript		2	-1	25319163	3024
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000128120	protein_coding		13	-1	81343315	1591
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000223903	protein_coding		19	-1	46326608	361
ENSMUSG00000081964	processed_pseudogene	Gm11873	ENSMUST00000117877	processed_pseudogene		4	1	20391096	1304
ENSMUSG00000101215	unprocessed_pseudogene	Gm28569	ENSMUST00000188748	unprocessed_pseudogene		Y	-1	49695819	315
ENSMUSG00000041836	protein_coding	Ptpre	ENSMUST00000211092	processed_transcript		7	1	135651938	2338
ENSMUSG00000100206	lincRNA	Gm28681	ENSMUST00000187387	lincRNA		Y	-1	49700566	2166
ENSMUSG00000110662	processed_pseudogene	Gm45722	ENSMUST00000213075	processed_pseudogene		8	-1	118382191	466
ENSMUSG00000007458	protein_coding	M6pr	ENSMUST00000007602	protein_coding	principal1	6	1	122308720	2515
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000223917	protein_coding		19	-1	46327121	332
ENSMUSG00000117510	processed_pseudogene	Gm50032	ENSMUST00000234511	processed_pseudogene		18	-1	10194781	341
ENSMUSG00000108903	lincRNA	Gm45029	ENSMUST00000208702	lincRNA		16	1	76680513	391
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000224444	processed_transcript		19	-1	46327149	328
ENSMUSG00000007458	protein_coding	M6pr	ENSMUST00000112610	protein_coding	principal1	6	1	122308720	2539
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000225072	retained_intron		19	-1	46326622	437
ENSMUSG00000037126	protein_coding	Psd	ENSMUST00000096029	protein_coding	alternative2	19	-1	46327156	3903
ENSMUSG00000100765	lincRNA	Gm28684	ENSMUST00000185586	lincRNA		Y	1	49732439	1500
ENSMUSG00000109333	lincRNA	Gm30790	ENSMUST00000208256	lincRNA		16	-1	76779092	958
ENSMUSG00000109333	lincRNA	Gm30790	ENSMUST00000208527	lincRNA		16	-1	76764195	809
ENSMUSG00000100765	lincRNA	Gm28684	ENSMUST00000189523	lincRNA		Y	1	49732893	438
ENSMUSG00000117512	processed_pseudogene	Gm7156	ENSMUST00000234437	processed_pseudogene		18	-1	10198174	499
ENSMUSG00000085830	antisense	Grin1os	ENSMUST00000129723	antisense		2	1	25291220	2891
ENSMUSG00000007458	protein_coding	M6pr	ENSMUST00000123093	retained_intron		6	1	122308999	2976
ENSMUSG00000036356	protein_coding	Csgalnact1	ENSMUST00000078350	protein_coding	principal1	8	-1	68735146	3943
ENSMUSG00000101475	unprocessed_pseudogene	Gm21316	ENSMUST00000191348	unprocessed_pseudogene		Y	-1	49843610	693
ENSMUSG00000117492	transcribed_processed_pseudogene	Gm19052	ENSMUST00000234829	processed_transcript		18	1	10217043	1501
ENSMUSG00000117492	transcribed_processed_pseudogene	Gm19052	ENSMUST00000234629	transcribed_processed_pseudogene		18	1	10236706	917
ENSMUSG00000024773	protein_coding	Atg2a	ENSMUST00000045351	protein_coding	principal1	19	1	6241668	6371
ENSMUSG00000099713	unprocessed_pseudogene	Gm21923	ENSMUST00000188455	unprocessed_pseudogene		Y	-1	49918209	696
ENSMUSG00000028792	protein_coding	Ak2	ENSMUST00000141982	processed_transcript		4	1	128991958	356
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000044492	protein_coding	principal1	5	1	3928274	13123
ENSMUSG00000117552	processed_pseudogene	Gm5686	ENSMUST00000234693	processed_pseudogene		18	1	10262207	1079
ENSMUSG00000083315	processed_pseudogene	Gm11871	ENSMUST00000122429	processed_pseudogene		4	-1	21010940	1061
ENSMUSG00000041578	protein_coding	Crx	ENSMUST00000044434	protein_coding	principal1	7	-1	15879968	2919
ENSMUSG00000024773	protein_coding	Atg2a	ENSMUST00000145600	protein_coding		19	1	6245465	5613
ENSMUSG00000020270	protein_coding	Smim23	ENSMUST00000109365	protein_coding		11	-1	32824562	331
ENSMUSG00000117363	TEC	Gm50033	ENSMUST00000234780	TEC		18	-1	10307820	718
ENSMUSG00000036356	protein_coding	Csgalnact1	ENSMUST00000130214	protein_coding	principal1	8	-1	68735114	3029
ENSMUSG00000099831	unprocessed_pseudogene	Gm28683	ENSMUST00000187134	unprocessed_pseudogene		Y	-1	49947815	615
ENSMUSG00000000751	protein_coding	Rpa1	ENSMUST00000092907	protein_coding	principal3	11	-1	75348324	5077
ENSMUSG00000024773	protein_coding	Atg2a	ENSMUST00000135018	retained_intron		19	1	6251488	706
ENSMUSG00000026961	protein_coding	Lrrc26	ENSMUST00000028337	protein_coding	principal1	2	1	25289915	1190
ENSMUSG00000040565	protein_coding	Btaf1	ENSMUST00000099494	protein_coding	principal1	19	1	36926079	7204
ENSMUSG00000083654	processed_pseudogene	Gm11875	ENSMUST00000118187	processed_pseudogene		4	1	21626380	799
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000140977	processed_transcript		5	1	3951290	375
ENSMUSG00000036356	protein_coding	Csgalnact1	ENSMUST00000136060	protein_coding		8	-1	68735102	2204
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000198973	retained_intron		5	1	3951301	581
ENSMUSG00000092547	unprocessed_pseudogene	Vmn1r-ps80	ENSMUST00000174838	unprocessed_pseudogene		7	-1	22670429	966
ENSMUSG00000101868	unprocessed_pseudogene	Gm28680	ENSMUST00000186743	unprocessed_pseudogene		Y	-1	49984503	480
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000177448	retained_intron		5	1	3954715	491
ENSMUSG00000041578	protein_coding	Crx	ENSMUST00000174318	protein_coding		7	-1	15872388	2880
ENSMUSG00000082672	processed_pseudogene	Gm11876	ENSMUST00000120002	processed_pseudogene		4	1	21671040	269
ENSMUSG00000039533	protein_coding	Mmd2	ENSMUST00000037048	protein_coding	principal1	5	-1	142608800	3317
ENSMUSG00000036356	protein_coding	Csgalnact1	ENSMUST00000143586	processed_transcript		8	-1	68735115	361
ENSMUSG00000039391	protein_coding	Ccdc81	ENSMUST00000131966	nonsense_mediated_decay		7	-1	89903629	2788
ENSMUSG00000036356	protein_coding	Csgalnact1	ENSMUST00000211871	processed_transcript		8	-1	68529887	346
ENSMUSG00000036356	protein_coding	Csgalnact1	ENSMUST00000150083	processed_transcript		8	-1	68735114	679
ENSMUSG00000095081	protein_coding	Vmn1r257	ENSMUST00000178871	protein_coding	principal1	7	-1	22692317	921
ENSMUSG00000100914	lincRNA	Gm28679	ENSMUST00000186013	lincRNA		Y	1	50028561	1499
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000123119	retained_intron		5	1	3971972	670
ENSMUSG00000039533	protein_coding	Mmd2	ENSMUST00000195947	retained_intron		5	-1	142582868	1876
ENSMUSG00000036356	protein_coding	Csgalnact1	ENSMUST00000125727	processed_transcript		8	-1	68735115	348
ENSMUSG00000020270	protein_coding	Smim23	ENSMUST00000020508	protein_coding	principal1	11	-1	32824605	620
ENSMUSG00000041578	protein_coding	Crx	ENSMUST00000172758	protein_coding		7	-1	15879844	1469
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000133952	protein_coding		5	1	3975616	499
ENSMUSG00000040565	protein_coding	Btaf1	ENSMUST00000238041	retained_intron		19	1	36960185	4876
ENSMUSG00000100914	lincRNA	Gm28679	ENSMUST00000186968	lincRNA		Y	1	50029014	438
ENSMUSG00000041578	protein_coding	Crx	ENSMUST00000174358	processed_transcript		7	-1	15879872	1259
ENSMUSG00000024773	protein_coding	Atg2a	ENSMUST00000151079	retained_intron		19	1	6256371	1575
ENSMUSG00000039533	protein_coding	Mmd2	ENSMUST00000196972	processed_transcript		5	-1	142608800	465
ENSMUSG00000036356	protein_coding	Csgalnact1	ENSMUST00000139141	processed_transcript		8	-1	68735115	346
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000238634	protein_coding		5	1	4023415	1352
ENSMUSG00000040565	protein_coding	Btaf1	ENSMUST00000236343	retained_intron		19	1	36961315	1400
ENSMUSG00000041578	protein_coding	Crx	ENSMUST00000132563	protein_coding		7	-1	15871402	783
ENSMUSG00000109169	processed_pseudogene	Gm18061	ENSMUST00000208350	processed_pseudogene		7	1	22711539	562
ENSMUSG00000000751	protein_coding	Rpa1	ENSMUST00000000767	protein_coding	alternative2	11	-1	75348310	2942
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000196350	retained_intron		5	1	4033759	2323
ENSMUSG00000020593	protein_coding	Lpin1	ENSMUST00000239165	protein_coding	alternative2	12	-1	16610966	5511
ENSMUSG00000102753	TEC	Gm37056	ENSMUST00000192141	TEC		3	-1	73043839	1865
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000196918	retained_intron		5	1	4059250	1676
ENSMUSG00000106667	IG_V_pseudogene	Igkv3-6	ENSMUST00000196007	IG_V_pseudogene		6	1	70642405	342
ENSMUSG00000083298	processed_pseudogene	Gm12085	ENSMUST00000119263	processed_pseudogene		11	-1	29334322	940
ENSMUSG00000020593	protein_coding	Lpin1	ENSMUST00000111067	protein_coding	principal4	12	-1	16610966	5433
ENSMUSG00000080827	processed_pseudogene	Gm12086	ENSMUST00000120863	processed_pseudogene		11	-1	29339682	228
ENSMUSG00000024773	protein_coding	Atg2a	ENSMUST00000237387	processed_transcript		19	1	6257787	658
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000176863	protein_coding		5	1	4064374	595
ENSMUSG00000082721	processed_pseudogene	Gm12087	ENSMUST00000121878	processed_pseudogene		11	1	29354199	258
ENSMUSG00000000751	protein_coding	Rpa1	ENSMUST00000149365	processed_transcript		11	-1	75348293	285
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000197366	retained_intron		5	1	4064496	479
ENSMUSG00000024773	protein_coding	Atg2a	ENSMUST00000143053	retained_intron		19	1	6258341	672
ENSMUSG00000083819	processed_pseudogene	Gm11977	ENSMUST00000118511	processed_pseudogene		11	-1	6783138	1461
ENSMUSG00000020593	protein_coding	Lpin1	ENSMUST00000238839	protein_coding	alternative2	12	-1	16646966	5430
ENSMUSG00000000751	protein_coding	Rpa1	ENSMUST00000154894	retained_intron		11	-1	75348295	716
ENSMUSG00000050756	protein_coding	Defb6	ENSMUST00000063112	protein_coding	principal1	8	1	19225478	323
ENSMUSG00000020593	protein_coding	Lpin1	ENSMUST00000221230	protein_coding	alternative2	12	-1	16589773	4114
ENSMUSG00000100338	protein_coding	Gm28870	ENSMUST00000187033	protein_coding	principal1	Y	1	50097276	880
ENSMUSG00000085197	antisense	1700125H03Rik	ENSMUST00000124929	antisense		8	1	68368434	508
ENSMUSG00000048304	protein_coding	Slitrk3	ENSMUST00000192477	protein_coding	principal1	3	-1	73056943	4592
ENSMUSG00000031841	protein_coding	Cdh13	ENSMUST00000117160	protein_coding	principal1	8	1	118283733	3785
ENSMUSG00000095363	protein_coding	Gm4567	ENSMUST00000190554	protein_coding	principal1	7	-1	22719710	1581
ENSMUSG00000085197	antisense	1700125H03Rik	ENSMUST00000139265	antisense		8	1	68368466	637
ENSMUSG00000095363	protein_coding	Gm4567	ENSMUST00000178591	protein_coding	principal1	7	-1	22714910	906
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000147629	nonsense_mediated_decay		5	1	4065296	718
ENSMUSG00000047462	protein_coding	Gpr141b	ENSMUST00000151029	protein_coding	principal1	13	-1	19732951	2764
ENSMUSG00000000751	protein_coding	Rpa1	ENSMUST00000135770	processed_transcript		11	-1	75342188	2040
ENSMUSG00000040407	protein_coding	Akap9	ENSMUST00000196837	retained_intron		5	1	4067473	460
ENSMUSG00000087489	antisense	Gm15656	ENSMUST00000132076	antisense		8	1	68457148	615
ENSMUSG00000048304	protein_coding	Slitrk3	ENSMUST00000059407	protein_coding	principal1	3	-1	73057803	3587
ENSMUSG00000109769	lincRNA	Gm39232	ENSMUST00000210760	lincRNA		8	-1	100726355	1012
ENSMUSG00000085487	processed_pseudogene	Gm15654	ENSMUST00000152660	processed_pseudogene		8	1	68620138	300
ENSMUSG00000106535	sense_intronic	Gm43031	ENSMUST00000198500	sense_intronic		5	1	4073571	1887
ENSMUSG00000104978	processed_pseudogene	Gm31274	ENSMUST00000197356	processed_pseudogene		5	-1	142622831	229
ENSMUSG00000116807	processed_pseudogene	Gm7501	ENSMUST00000231248	processed_pseudogene		16	1	76941616	568
ENSMUSG00000106333	lincRNA	4930428O21Rik	ENSMUST00000198537	lincRNA		5	-1	107703480	1740
ENSMUSG00000110069	processed_pseudogene	Gm45422	ENSMUST00000211476	processed_pseudogene		8	1	102534645	246
ENSMUSG00000031841	protein_coding	Cdh13	ENSMUST00000145849	retained_intron		8	1	118283755	1622
ENSMUSG00000020593	protein_coding	Lpin1	ENSMUST00000222989	protein_coding	alternative2	12	-1	16589766	4103
ENSMUSG00000084947	antisense	Gm15594	ENSMUST00000137958	antisense		6	1	18424684	2215
ENSMUSG00000102036	transcribed_processed_pseudogene	1700063K16Rik	ENSMUST00000191341	processed_transcript		16	-1	76841784	952
ENSMUSG00000106944	TEC	Gm43843	ENSMUST00000202396	TEC		6	-1	18431245	1587
ENSMUSG00000102036	transcribed_processed_pseudogene	1700063K16Rik	ENSMUST00000190306	transcribed_processed_pseudogene		16	-1	76821741	369
ENSMUSG00000100857	lincRNA	1700041M19Rik	ENSMUST00000208105	lincRNA		16	-1	77010897	1356
ENSMUSG00000100857	lincRNA	1700041M19Rik	ENSMUST00000207519	lincRNA		16	-1	76889281	711
ENSMUSG00000031841	protein_coding	Cdh13	ENSMUST00000142551	retained_intron		8	1	118283775	1535
ENSMUSG00000100857	lincRNA	1700041M19Rik	ENSMUST00000207924	lincRNA		16	-1	77010879	196
ENSMUSG00000091474	protein_coding	2610021A01Rik	ENSMUST00000205587	processed_transcript		7	1	41599230	514
ENSMUSG00000031841	protein_coding	Cdh13	ENSMUST00000129548	retained_intron		8	1	118283796	715
ENSMUSG00000020593	protein_coding	Lpin1	ENSMUST00000221297	protein_coding	principal4	12	-1	16604113	3100
ENSMUSG00000031841	protein_coding	Cdh13	ENSMUST00000148836	retained_intron		8	1	118283797	4565
ENSMUSG00000100857	lincRNA	1700041M19Rik	ENSMUST00000190908	lincRNA		16	-1	77010875	1123
ENSMUSG00000100857	lincRNA	1700041M19Rik	ENSMUST00000190317	lincRNA		16	-1	77010881	682
ENSMUSG00000020593	protein_coding	Lpin1	ENSMUST00000221789	processed_transcript		12	-1	16562444	624
ENSMUSG00000090030	processed_transcript	A430072P03Rik	ENSMUST00000161480	processed_transcript		5	1	107725157	1510
ENSMUSG00000020593	protein_coding	Lpin1	ENSMUST00000223129	retained_intron		12	-1	16562038	3022
ENSMUSG00000031841	protein_coding	Cdh13	ENSMUST00000123567	processed_transcript		8	1	118314413	2708
ENSMUSG00000090030	processed_transcript	A430072P03Rik	ENSMUST00000162148	processed_transcript		5	1	107726398	426
ENSMUSG00000020593	protein_coding	Lpin1	ENSMUST00000221146	protein_coding		12	-1	16589720	707
ENSMUSG00000037306	protein_coding	Man1c1	ENSMUST00000054096	protein_coding	principal1	4	-1	134704290	4715
ENSMUSG00000031841	protein_coding	Cdh13	ENSMUST00000212476	processed_transcript		8	1	119151465	580
ENSMUSG00000019988	protein_coding	Nedd1	ENSMUST00000020163	protein_coding	principal1	10	-1	92722420	3534
ENSMUSG00000024258	protein_coding	Polr2d	ENSMUST00000025106	protein_coding	principal1	18	1	31789159	1015
ENSMUSG00000091474	protein_coding	2610021A01Rik	ENSMUST00000163475	protein_coding	principal1	7	1	41599261	4004
ENSMUSG00000102362	lincRNA	4930509J09Rik	ENSMUST00000194514	lincRNA		3	-1	73481651	1526
ENSMUSG00000038954	protein_coding	Supt3	ENSMUST00000050630	protein_coding	principal2	17	1	44777152	1508
ENSMUSG00000102820	lincRNA	Gm38353	ENSMUST00000192351	lincRNA		3	1	73329434	617
ENSMUSG00000020593	protein_coding	Lpin1	ENSMUST00000067124	protein_coding	principal4	12	-1	16589770	5581
ENSMUSG00000031841	protein_coding	Cdh13	ENSMUST00000151842	processed_transcript		8	1	119277411	620
ENSMUSG00000091474	protein_coding	2610021A01Rik	ENSMUST00000205721	processed_transcript		7	1	41599285	334
ENSMUSG00000103428	lincRNA	Gm20754	ENSMUST00000192263	lincRNA		3	1	73066316	428
ENSMUSG00000024258	protein_coding	Polr2d	ENSMUST00000234146	protein_coding		18	1	31789160	706
ENSMUSG00000037306	protein_coding	Man1c1	ENSMUST00000176606	retained_intron		4	-1	134703767	2767
ENSMUSG00000110548	antisense	Gm45721	ENSMUST00000212267	antisense		8	-1	118610499	607
ENSMUSG00000101052	unprocessed_pseudogene	Gm28471	ENSMUST00000185994	unprocessed_pseudogene		Y	-1	84592446	615
ENSMUSG00000091474	protein_coding	2610021A01Rik	ENSMUST00000205433	protein_coding		7	1	41599324	594
ENSMUSG00000037306	protein_coding	Man1c1	ENSMUST00000038628	protein_coding	principal1	4	-1	134704290	4285
ENSMUSG00000038954	protein_coding	Supt3	ENSMUST00000127798	protein_coding		17	1	44777396	1180
ENSMUSG00000029885	protein_coding	Moxd2	ENSMUST00000031937	protein_coding	principal1	6	-1	40887494	1860
ENSMUSG00000110667	antisense	Gm45720	ENSMUST00000211881	antisense		8	-1	118615879	484
ENSMUSG00000103428	lincRNA	Gm20754	ENSMUST00000192642	lincRNA		3	1	73066351	1357
ENSMUSG00000091474	protein_coding	2610021A01Rik	ENSMUST00000206985	retained_intron		7	1	41611984	574
ENSMUSG00000038954	protein_coding	Supt3	ENSMUST00000129416	protein_coding	alternative2	17	1	44786631	1218
ENSMUSG00000102916	TEC	Gm37725	ENSMUST00000193965	TEC		3	1	73164086	2125
ENSMUSG00000091474	protein_coding	2610021A01Rik	ENSMUST00000206757	retained_intron		7	1	41624575	532
ENSMUSG00000026679	protein_coding	Enkur	ENSMUST00000027992	protein_coding	principal1	2	-1	21205365	1199
ENSMUSG00000117898	processed_pseudogene	Gm8986	ENSMUST00000238045	processed_pseudogene		18	1	74400608	440
ENSMUSG00000038954	protein_coding	Supt3	ENSMUST00000130623	processed_transcript		17	1	44777325	2884
ENSMUSG00000019988	protein_coding	Nedd1	ENSMUST00000214417	retained_intron		10	-1	92722363	1866
ENSMUSG00000118303	processed_pseudogene	Gm50168	ENSMUST00000235981	processed_pseudogene		18	1	74420805	724
ENSMUSG00000026679	protein_coding	Enkur	ENSMUST00000156248	processed_transcript		2	-1	21205352	619
ENSMUSG00000090048	antisense	Runx2os3	ENSMUST00000160203	antisense		17	1	44561990	738
ENSMUSG00000019988	protein_coding	Nedd1	ENSMUST00000215970	retained_intron		10	-1	92716478	627
ENSMUSG00000089849	antisense	Runx2os2	ENSMUST00000161664	antisense		17	1	44710222	818
ENSMUSG00000026679	protein_coding	Enkur	ENSMUST00000147793	processed_transcript		2	-1	21205239	708
ENSMUSG00000019988	protein_coding	Nedd1	ENSMUST00000216086	nonsense_mediated_decay		10	-1	92722404	391
ENSMUSG00000082579	processed_pseudogene	Gm11979	ENSMUST00000119629	processed_pseudogene		11	-1	6786580	743
ENSMUSG00000000416	protein_coding	Cttnbp2	ENSMUST00000152499	retained_intron		6	-1	18428231	4391
ENSMUSG00000041609	protein_coding	Bicdl1	ENSMUST00000201869	retained_intron		5	-1	115649794	1620
ENSMUSG00000073394	antisense	Runx2os1	ENSMUST00000097320	antisense		17	1	44735845	792
ENSMUSG00000082897	processed_pseudogene	Gm11982	ENSMUST00000121480	processed_pseudogene		11	-1	6825809	314
ENSMUSG00000106085	unprocessed_pseudogene	Gm43675	ENSMUST00000199468	unprocessed_pseudogene		3	1	21603810	1184
ENSMUSG00000039391	protein_coding	Ccdc81	ENSMUST00000041195	protein_coding	principal1	7	-1	89903618	2439
ENSMUSG00000049491	protein_coding	Slc36a3	ENSMUST00000020502	protein_coding	principal1	11	-1	55151708	1768
ENSMUSG00000105895	sense_intronic	Gm42829	ENSMUST00000198417	sense_intronic		5	1	122408490	2585
ENSMUSG00000085871	antisense	Ube2uos	ENSMUST00000142634	antisense		4	-1	100527801	608
ENSMUSG00000051401	protein_coding	Kctd16	ENSMUST00000236889	protein_coding	principal1	18	1	40257023	2767
ENSMUSG00000114599	processed_pseudogene	Gm48070	ENSMUST00000225459	processed_pseudogene		13	1	97609536	282
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000029911	protein_coding	principal1	4	1	21847583	4545
ENSMUSG00000051401	protein_coding	Kctd16	ENSMUST00000235241	protein_coding		18	1	40258803	791
ENSMUSG00000051401	protein_coding	Kctd16	ENSMUST00000236301	processed_transcript		18	1	40408085	1113
ENSMUSG00000035798	protein_coding	Zdhhc17	ENSMUST00000217698	retained_intron		10	-1	111010140	5497
ENSMUSG00000027792	protein_coding	Bche	ENSMUST00000029367	protein_coding	principal1	3	-1	73708415	6210
ENSMUSG00000051401	protein_coding	Kctd16	ENSMUST00000238039	processed_transcript		18	1	40512993	810
ENSMUSG00000041859	protein_coding	Mcm3	ENSMUST00000053266	protein_coding	principal1	1	-1	20820312	3031
ENSMUSG00000049491	protein_coding	Slc36a3	ENSMUST00000128244	nonsense_mediated_decay		11	-1	55151686	1841
ENSMUSG00000035798	protein_coding	Zdhhc17	ENSMUST00000220247	nonsense_mediated_decay		10	-1	111009995	3635
ENSMUSG00000027792	protein_coding	Bche	ENSMUST00000133690	retained_intron		3	-1	73708242	2024
ENSMUSG00000051401	protein_coding	Kctd16	ENSMUST00000237456	processed_transcript		18	1	40513010	307
ENSMUSG00000029275	protein_coding	Gfi1	ENSMUST00000031205	protein_coding	principal3	5	-1	107724343	2860
ENSMUSG00000049491	protein_coding	Slc36a3	ENSMUST00000069816	protein_coding		11	-1	55151708	893
ENSMUSG00000035798	protein_coding	Zdhhc17	ENSMUST00000217982	retained_intron		10	-1	110947697	714
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000185001	nonsense_mediated_decay		4	1	21848048	2438
ENSMUSG00000044177	protein_coding	Wfikkn2	ENSMUST00000061469	protein_coding	principal1	11	-1	94242707	3516
ENSMUSG00000051401	protein_coding	Kctd16	ENSMUST00000237764	processed_transcript		18	1	40515078	619
ENSMUSG00000051401	protein_coding	Kctd16	ENSMUST00000237805	processed_transcript		18	1	40521764	624
ENSMUSG00000051401	protein_coding	Kctd16	ENSMUST00000236525	processed_transcript		18	1	40523099	644
ENSMUSG00000053693	protein_coding	Mast1	ENSMUST00000109741	protein_coding	principal2	8	-1	84937353	4872
ENSMUSG00000038260	protein_coding	Trpm4	ENSMUST00000042194	protein_coding	principal2	7	-1	45333769	4234
ENSMUSG00000035798	protein_coding	Zdhhc17	ENSMUST00000218972	retained_intron		10	-1	110961083	555
ENSMUSG00000035798	protein_coding	Zdhhc17	ENSMUST00000218895	nonsense_mediated_decay		10	-1	110967846	643
ENSMUSG00000085531	antisense	Slc36a3os	ENSMUST00000155883	antisense		11	1	55137044	520
ENSMUSG00000051401	protein_coding	Kctd16	ENSMUST00000091927	protein_coding	principal1	18	1	40258361	1349
ENSMUSG00000027792	protein_coding	Bche	ENSMUST00000138216	protein_coding		3	-1	73708267	721
ENSMUSG00000046593	protein_coding	Tmem215	ENSMUST00000049655	protein_coding	principal1	4	1	40472180	4733
ENSMUSG00000029275	protein_coding	Gfi1	ENSMUST00000159164	protein_coding	principal3	5	-1	107725805	2648
ENSMUSG00000051401	protein_coding	Kctd16	ENSMUST00000096572	protein_coding		18	1	40256962	723
ENSMUSG00000044177	protein_coding	Wfikkn2	ENSMUST00000131352	processed_transcript		11	-1	94246005	444
ENSMUSG00000027792	protein_coding	Bche	ENSMUST00000153917	processed_transcript		3	-1	73708267	443
ENSMUSG00000035798	protein_coding	Zdhhc17	ENSMUST00000099285	retained_intron		10	-1	111010003	1146
ENSMUSG00000038260	protein_coding	Trpm4	ENSMUST00000209506	nonsense_mediated_decay		7	-1	45305375	609
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000098238	protein_coding		4	1	21848055	4407
ENSMUSG00000041859	protein_coding	Mcm3	ENSMUST00000185296	retained_intron		1	-1	20820260	3431
ENSMUSG00000106460	processed_pseudogene	Gm17935	ENSMUST00000196649	processed_pseudogene		3	1	21648387	772
ENSMUSG00000095335	IG_V_gene	Igkv3-5	ENSMUST00000103400	IG_V_gene	principal1	6	1	70663275	382
ENSMUSG00000118315	antisense	Gm31019	ENSMUST00000237648	antisense		18	-1	40439737	992
ENSMUSG00000029275	protein_coding	Gfi1	ENSMUST00000159263	protein_coding		5	-1	107726036	689
ENSMUSG00000041859	protein_coding	Mcm3	ENSMUST00000188112	retained_intron		1	-1	20803721	716
ENSMUSG00000046593	protein_coding	Tmem215	ENSMUST00000179526	protein_coding	principal1	4	1	40473130	2276
ENSMUSG00000035798	protein_coding	Zdhhc17	ENSMUST00000219307	protein_coding		10	-1	111005754	740
ENSMUSG00000038260	protein_coding	Trpm4	ENSMUST00000211743	protein_coding	alternative2	7	-1	45333656	3673
ENSMUSG00000041859	protein_coding	Mcm3	ENSMUST00000191061	retained_intron		1	-1	20804933	607
ENSMUSG00000117943	TEC	Gm50403	ENSMUST00000235668	TEC		18	1	40346169	5583
ENSMUSG00000035798	protein_coding	Zdhhc17	ENSMUST00000217793	retained_intron		10	-1	111009998	557
ENSMUSG00000038260	protein_coding	Trpm4	ENSMUST00000210639	retained_intron		7	-1	45305204	625
ENSMUSG00000041859	protein_coding	Mcm3	ENSMUST00000190421	retained_intron		1	-1	20805940	900
ENSMUSG00000029275	protein_coding	Gfi1	ENSMUST00000065478	protein_coding	alternative2	5	-1	107725805	2639
ENSMUSG00000035798	protein_coding	Zdhhc17	ENSMUST00000218981	retained_intron		10	-1	111009977	564
ENSMUSG00000038260	protein_coding	Trpm4	ENSMUST00000210311	protein_coding		7	-1	45305342	498
ENSMUSG00000117674	antisense	Gm31087	ENSMUST00000236700	antisense		18	-1	40258495	647
ENSMUSG00000094320	processed_pseudogene	Chchd2-ps	ENSMUST00000117487	processed_pseudogene		4	-1	148068492	462
ENSMUSG00000053693	protein_coding	Mast1	ENSMUST00000153000	retained_intron		8	-1	84924114	4821
ENSMUSG00000001467	protein_coding	Cyp51	ENSMUST00000001507	protein_coding	principal1	5	-1	4104746	3931
ENSMUSG00000038260	protein_coding	Trpm4	ENSMUST00000209239	retained_intron		7	-1	45311568	3521
ENSMUSG00000015839	protein_coding	Nfe2l2	ENSMUST00000102672	protein_coding	principal1	2	-1	75704641	2475
ENSMUSG00000053693	protein_coding	Mast1	ENSMUST00000119820	protein_coding	alternative2	8	-1	84937359	2078
ENSMUSG00000078494	antisense	Gm13201	ENSMUST00000144031	antisense		4	-1	148075420	600
ENSMUSG00000078494	antisense	Gm13201	ENSMUST00000177629	antisense		4	-1	148073016	642
ENSMUSG00000071169	protein_coding	Defb46	ENSMUST00000095436	protein_coding	principal1	8	1	19239916	174
ENSMUSG00000001467	protein_coding	Cyp51	ENSMUST00000129448	processed_transcript		5	-1	4104343	528
ENSMUSG00000015839	protein_coding	Nfe2l2	ENSMUST00000152371	processed_transcript		2	-1	75704489	1447
ENSMUSG00000038260	protein_coding	Trpm4	ENSMUST00000210541	nonsense_mediated_decay		7	-1	45333780	685
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000097588	protein_coding	principal1	1	-1	131527347	8026
ENSMUSG00000087222	processed_transcript	E030042O20Rik	ENSMUST00000135244	processed_transcript		2	1	75704770	1427
ENSMUSG00000028412	protein_coding	Slc44a1	ENSMUST00000107646	protein_coding		4	1	53440413	1974
ENSMUSG00000053693	protein_coding	Mast1	ENSMUST00000138221	retained_intron		8	-1	84925746	760
ENSMUSG00000104084	TEC	Gm38276	ENSMUST00000192446	TEC		6	-1	40890870	1343
ENSMUSG00000038260	protein_coding	Trpm4	ENSMUST00000211411	retained_intron		7	-1	45333740	3350
ENSMUSG00000001467	protein_coding	Cyp51	ENSMUST00000151539	retained_intron		5	-1	4103381	781
ENSMUSG00000087527	lincRNA	Gm13656	ENSMUST00000123829	lincRNA		2	-1	75730172	345
ENSMUSG00000110084	TEC	Gm45257	ENSMUST00000210301	TEC		8	-1	102658188	3998
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000187042	protein_coding		1	-1	131300453	1192
ENSMUSG00000046721	processed_pseudogene	Rpl14-ps1	ENSMUST00000026901	processed_pseudogene		7	1	45324965	653
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000152666	processed_transcript		4	1	21848058	3470
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000108229	protein_coding		4	1	21848058	2922
ENSMUSG00000110269	TEC	Gm45258	ENSMUST00000210042	TEC		8	-1	102781042	853
ENSMUSG00000084078	unprocessed_pseudogene	Olfr349-ps1	ENSMUST00000121879	unprocessed_pseudogene		2	1	36844518	609
ENSMUSG00000001467	protein_coding	Cyp51	ENSMUST00000199909	retained_intron		5	-1	4104421	693
ENSMUSG00000053693	protein_coding	Mast1	ENSMUST00000130923	retained_intron		8	-1	84928775	884
ENSMUSG00000105893	processed_pseudogene	Wdr46-ps	ENSMUST00000200591	processed_pseudogene		5	1	3989006	1712
ENSMUSG00000107563	antisense	4930587E11Rik	ENSMUST00000203050	antisense		6	1	102266100	382
ENSMUSG00000094594	processed_pseudogene	Tpd52-ps	ENSMUST00000178097	processed_pseudogene		8	-1	79680806	523
ENSMUSG00000100576	unprocessed_pseudogene	Gm28975	ENSMUST00000186412	unprocessed_pseudogene		Y	-1	2061919	686
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000099696	protein_coding	principal1	2	-1	93462411	1657
ENSMUSG00000053693	protein_coding	Mast1	ENSMUST00000128356	retained_intron		8	-1	84937344	635
ENSMUSG00000046364	protein_coding	Rpl27a	ENSMUST00000143107	protein_coding	principal1	7	1	109519147	1158
ENSMUSG00000107563	antisense	4930587E11Rik	ENSMUST00000204857	antisense		6	1	102266122	807
ENSMUSG00000100326	processed_pseudogene	Gm28974	ENSMUST00000187893	processed_pseudogene		Y	1	2076580	231
ENSMUSG00000031592	protein_coding	Pcm1	ENSMUST00000211090	retained_intron		8	1	41239752	2631
ENSMUSG00000054944	lincRNA	5330416C01Rik	ENSMUST00000144993	lincRNA		13	-1	97747411	3287
ENSMUSG00000020917	protein_coding	Acly	ENSMUST00000107389	protein_coding	alternative1	11	-1	100528000	4426
ENSMUSG00000030075	protein_coding	Cntn3	ENSMUST00000204990	retained_intron		6	-1	102166201	3547
ENSMUSG00000054944	lincRNA	5330416C01Rik	ENSMUST00000125960	lincRNA		13	-1	97743121	747
ENSMUSG00000100356	unprocessed_pseudogene	Gm18797	ENSMUST00000190809	unprocessed_pseudogene		Y	1	2078596	1174
ENSMUSG00000046364	protein_coding	Rpl27a	ENSMUST00000132877	retained_intron		7	1	109519196	1596
ENSMUSG00000050015	protein_coding	Olfr350	ENSMUST00000215100	protein_coding	principal1	2	1	36846310	2086
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000138681	processed_transcript		4	1	21848064	741
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000143031	protein_coding	alternative2	12	1	75818318	21704
ENSMUSG00000101443	processed_pseudogene	Rhoay-ps1	ENSMUST00000191243	processed_pseudogene		Y	1	2095392	581
ENSMUSG00000050015	protein_coding	Olfr350	ENSMUST00000214457	protein_coding	principal1	2	1	36846310	2022
ENSMUSG00000020917	protein_coding	Acly	ENSMUST00000007131	protein_coding	principal3	11	-1	100528000	4393
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000190336	processed_transcript		1	-1	131333070	1680
ENSMUSG00000046364	protein_coding	Rpl27a	ENSMUST00000149143	retained_intron		7	1	109519199	350
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000186543	protein_coding		1	-1	131527347	3533
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000151621	processed_transcript		4	1	21848073	645
ENSMUSG00000054944	lincRNA	5330416C01Rik	ENSMUST00000123535	lincRNA		13	-1	97747379	564
ENSMUSG00000069733	protein_coding	Ube2u	ENSMUST00000133493	protein_coding	principal1	4	1	100478849	1537
ENSMUSG00000046364	protein_coding	Rpl27a	ENSMUST00000053298	retained_intron		7	1	109519213	760
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000189892	processed_transcript		1	-1	131311065	1044
ENSMUSG00000050015	protein_coding	Olfr350	ENSMUST00000055130	protein_coding	principal1	2	1	36850048	939
ENSMUSG00000020917	protein_coding	Acly	ENSMUST00000154151	processed_transcript		11	-1	100479511	601
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000150368	processed_transcript		4	1	21848081	822
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000188770	protein_coding		1	-1	131344547	2449
ENSMUSG00000029007	protein_coding	Agtrap	ENSMUST00000030865	protein_coding	principal1	4	-1	148088031	3996
ENSMUSG00000086813	processed_transcript	Gm13657	ENSMUST00000135682	processed_transcript		2	1	75777188	1939
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000138419	processed_transcript		4	1	21854068	686
ENSMUSG00000024271	protein_coding	Elp2	ENSMUST00000234903	processed_transcript		18	1	24602866	429
ENSMUSG00000046364	protein_coding	Rpl27a	ENSMUST00000156921	nonsense_mediated_decay		7	1	109519220	526
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000188604	processed_transcript		1	-1	131296380	213
ENSMUSG00000069733	protein_coding	Ube2u	ENSMUST00000092730	protein_coding		4	1	100478867	1435
ENSMUSG00000020917	protein_coding	Acly	ENSMUST00000152969	processed_transcript		11	-1	100494199	772
ENSMUSG00000081833	processed_pseudogene	Gm13669	ENSMUST00000122366	processed_pseudogene		2	1	75808358	457
ENSMUSG00000075383	protein_coding	Olfr351	ENSMUST00000213676	protein_coding	principal1	2	-1	36862659	3426
ENSMUSG00000082187	processed_pseudogene	Gm13670	ENSMUST00000120947	processed_pseudogene		2	-1	75822793	461
ENSMUSG00000046364	protein_coding	Rpl27a	ENSMUST00000174303	retained_intron		7	1	109519270	400
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000150927	processed_transcript		4	1	21858726	753
ENSMUSG00000107300	TEC	Gm43279	ENSMUST00000202376	TEC		5	1	66688882	2512
ENSMUSG00000020917	protein_coding	Acly	ENSMUST00000154888	processed_transcript		11	-1	100499098	584
ENSMUSG00000075383	protein_coding	Olfr351	ENSMUST00000215137	protein_coding	principal1	2	-1	36862660	2856
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000185596	protein_coding		1	-1	131364064	2496
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000156136	processed_transcript		4	1	21858999	376
ENSMUSG00000020917	protein_coding	Acly	ENSMUST00000107385	protein_coding		11	-1	100527869	1741
ENSMUSG00000094091	protein_coding	Gm21885	ENSMUST00000208510	protein_coding	principal1	11	1	94281873	775
ENSMUSG00000029007	protein_coding	Agtrap	ENSMUST00000152323	processed_transcript		4	-1	148084776	621
ENSMUSG00000029007	protein_coding	Agtrap	ENSMUST00000137393	retained_intron		4	-1	148088031	194
ENSMUSG00000075383	protein_coding	Olfr351	ENSMUST00000100150	protein_coding	principal1	2	-1	36860346	933
ENSMUSG00000094091	protein_coding	Gm21885	ENSMUST00000178891	protein_coding		11	1	94284652	327
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000133623	retained_intron		12	1	75818323	1624
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000188437	retained_intron		1	-1	131332263	411
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000148561	processed_transcript		4	1	21871034	851
ENSMUSG00000069117	protein_coding	Rps18-ps6	ENSMUST00000074072	protein_coding	principal1	13	-1	97760632	561
ENSMUSG00000109392	protein_coding	Gm5737	ENSMUST00000208668	protein_coding	principal1	7	1	120812365	1272
ENSMUSG00000028248	protein_coding	Pnisr	ENSMUST00000133241	processed_transcript		4	1	21874204	371
ENSMUSG00000105440	lincRNA	Gm31693	ENSMUST00000200150	lincRNA		3	1	21702815	909
ENSMUSG00000020917	protein_coding	Acly	ENSMUST00000165111	protein_coding	principal3	11	-1	100523598	4162
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000150317	protein_coding		12	1	75818329	1974
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000189893	retained_intron		1	-1	131527352	3171
ENSMUSG00000103441	transcribed_processed_pseudogene	7530428D23Rik	ENSMUST00000191725	processed_transcript		3	-1	21800773	765
ENSMUSG00000099607	unprocessed_pseudogene	Gm28205	ENSMUST00000189177	unprocessed_pseudogene		Y	-1	56085532	697
ENSMUSG00000097346	lincRNA	Rps18-ps4	ENSMUST00000180396	lincRNA		13	1	97751112	1073
ENSMUSG00000103441	transcribed_processed_pseudogene	7530428D23Rik	ENSMUST00000194717	processed_transcript		3	-1	21762531	559
ENSMUSG00000103441	transcribed_processed_pseudogene	7530428D23Rik	ENSMUST00000193217	transcribed_processed_pseudogene		3	-1	21753962	165
ENSMUSG00000116855	processed_pseudogene	Gm49608	ENSMUST00000232313	processed_pseudogene		16	-1	51416948	315
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000185445	protein_coding		1	-1	131514232	418
ENSMUSG00000026425	protein_coding	Srgap2	ENSMUST00000187273	protein_coding		1	-1	131504366	395
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000157033	retained_intron		12	1	75818350	2121
ENSMUSG00000106321	lincRNA	Gm43674	ENSMUST00000196313	lincRNA		3	-1	21998468	791
ENSMUSG00000092173	unprocessed_pseudogene	Vmn2r-ps38	ENSMUST00000173752	unprocessed_pseudogene		7	-1	7720205	2573
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000148324	protein_coding		12	1	75852730	639
ENSMUSG00000102733	TEC	Gm38262	ENSMUST00000194760	TEC		1	-1	131342683	1382
ENSMUSG00000013622	protein_coding	Atraid	ENSMUST00000201174	protein_coding		5	1	31048312	391
ENSMUSG00000100242	lincRNA	Gm28206	ENSMUST00000190437	lincRNA		Y	-1	56094749	2169
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000124685	retained_intron		12	1	75909218	3018
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000148825	protein_coding		12	1	76022300	585
ENSMUSG00000031592	protein_coding	Pcm1	ENSMUST00000210862	protein_coding		8	1	41239765	691
ENSMUSG00000041609	protein_coding	Bicdl1	ENSMUST00000055408	protein_coding	principal1	5	-1	115731621	3026
ENSMUSG00000116885	lincRNA	4930420G21Rik	ENSMUST00000231793	lincRNA		16	1	88376609	2396
ENSMUSG00000116885	lincRNA	4930420G21Rik	ENSMUST00000231479	lincRNA		16	1	88426390	1117
ENSMUSG00000013622	protein_coding	Atraid	ENSMUST00000201887	retained_intron		5	1	31048321	1696
ENSMUSG00000116754	lincRNA	Gm33255	ENSMUST00000231384	lincRNA		16	-1	88381696	995
ENSMUSG00000031673	protein_coding	Cdh11	ENSMUST00000075190	protein_coding	principal1	8	-1	102785642	5647
ENSMUSG00000116845	processed_pseudogene	Gm46546	ENSMUST00000232621	processed_pseudogene		16	1	88459945	249
ENSMUSG00000031673	protein_coding	Cdh11	ENSMUST00000210578	retained_intron		8	-1	102637319	599
ENSMUSG00000096399	protein_coding	Vmn2r35	ENSMUST00000169683	protein_coding	principal1	7	-1	7819867	2586
ENSMUSG00000000416	protein_coding	Cttnbp2	ENSMUST00000146775	protein_coding		6	-1	18434451	4224
ENSMUSG00000055811	protein_coding	Cldn17	ENSMUST00000069549	protein_coding	principal1	16	-1	88506978	1172
ENSMUSG00000042371	protein_coding	Slc5a10	ENSMUST00000128196	processed_transcript		11	-1	61720826	2209
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000085280	protein_coding		12	1	76031614	7335
ENSMUSG00000026141	protein_coding	Col19a1	ENSMUST00000144297	processed_transcript		1	-1	24452745	5441
ENSMUSG00000028412	protein_coding	Slc44a1	ENSMUST00000102911	protein_coding	principal2	4	1	53440413	3102
ENSMUSG00000014077	protein_coding	Chp1	ENSMUST00000014221	protein_coding	principal1	2	1	119547697	2609
ENSMUSG00000031673	protein_coding	Cdh11	ENSMUST00000210425	retained_intron		8	-1	102785642	5153
ENSMUSG00000109997	TEC	9430099M06Rik	ENSMUST00000210409	TEC		8	-1	102706790	742
ENSMUSG00000050520	protein_coding	Cldn8	ENSMUST00000049697	protein_coding	principal1	16	-1	88563183	2356
ENSMUSG00000028412	protein_coding	Slc44a1	ENSMUST00000136607	processed_transcript		4	1	53440671	328
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000103018	protein_coding	principal3	11	-1	120151346	4578
ENSMUSG00000014077	protein_coding	Chp1	ENSMUST00000119172	protein_coding		2	1	119547721	3027
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000045402	protein_coding	alternative2	11	-1	120151346	4554
ENSMUSG00000109337	TEC	Gm45047	ENSMUST00000207651	TEC		7	1	120890705	309
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000139204	protein_coding		12	1	76048578	5789
ENSMUSG00000028412	protein_coding	Slc44a1	ENSMUST00000107651	protein_coding	alternative1	4	1	53440671	4382
ENSMUSG00000085118	antisense	Gm15774	ENSMUST00000141810	antisense		7	-1	120875298	2176
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000146641	processed_transcript		11	-1	120106988	971
ENSMUSG00000028412	protein_coding	Slc44a1	ENSMUST00000107647	protein_coding	alternative1	4	1	53440684	2176
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000154762	retained_intron		12	1	76059674	682
ENSMUSG00000028412	protein_coding	Slc44a1	ENSMUST00000107645	protein_coding		4	1	53535612	2365
ENSMUSG00000014077	protein_coding	Chp1	ENSMUST00000154406	retained_intron		2	1	119547812	543
ENSMUSG00000050239	protein_coding	Krtap24-1	ENSMUST00000052512	protein_coding	principal1	16	-1	88612279	1575
ENSMUSG00000014077	protein_coding	Chp1	ENSMUST00000132448	protein_coding		2	1	119559512	518
ENSMUSG00000000416	protein_coding	Cttnbp2	ENSMUST00000148602	nonsense_mediated_decay		6	-1	18514749	5462
ENSMUSG00000028322	protein_coding	Exosc3	ENSMUST00000030003	protein_coding	principal1	4	-1	45320629	1077
ENSMUSG00000028412	protein_coding	Slc44a1	ENSMUST00000133582	processed_transcript		4	1	53596105	662
ENSMUSG00000086132	processed_transcript	Gm13631	ENSMUST00000140978	processed_transcript		2	1	70038911	654
ENSMUSG00000014077	protein_coding	Chp1	ENSMUST00000137585	retained_intron		2	1	119566605	738
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000131480	protein_coding		12	1	76072016	913
ENSMUSG00000084970	antisense	1700060J05Rik	ENSMUST00000138377	antisense		4	-1	53564697	1060
ENSMUSG00000102859	processed_pseudogene	Gm8625	ENSMUST00000194185	processed_pseudogene		3	1	73933046	1077
ENSMUSG00000029671	protein_coding	Wnt16	ENSMUST00000128245	protein_coding		6	1	22288227	3285
ENSMUSG00000045331	protein_coding	2310079G19Rik	ENSMUST00000052337	protein_coding	principal1	16	-1	88627666	881
ENSMUSG00000118142	processed_pseudogene	Gm19312	ENSMUST00000237669	processed_pseudogene		19	1	16413494	797
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000051777	protein_coding	principal2	7	1	100372233	7803
ENSMUSG00000028322	protein_coding	Exosc3	ENSMUST00000143111	processed_transcript		4	-1	45320336	451
ENSMUSG00000118033	lincRNA	Gm50362	ENSMUST00000235262	lincRNA		19	-1	16422829	1075
ENSMUSG00000004263	protein_coding	Atn1	ENSMUST00000088357	protein_coding	principal1	6	-1	124756524	4433
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000148503	processed_transcript		11	-1	120108588	658
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000154509	protein_coding		12	1	76081656	684
ENSMUSG00000116616	lincRNA	Gm49688	ENSMUST00000232360	lincRNA		16	1	88608670	1364
ENSMUSG00000104096	lincRNA	Gm20356	ENSMUST00000193390	lincRNA		3	-1	74017277	2477
ENSMUSG00000000416	protein_coding	Cttnbp2	ENSMUST00000090601	protein_coding	principal1	6	-1	18514821	5183
ENSMUSG00000028322	protein_coding	Exosc3	ENSMUST00000152056	protein_coding		4	-1	45342732	435
ENSMUSG00000057176	protein_coding	Ccdc189	ENSMUST00000072155	protein_coding	principal1	7	-1	127588595	2536
ENSMUSG00000041609	protein_coding	Bicdl1	ENSMUST00000118576	protein_coding		5	-1	115652986	1874
ENSMUSG00000004263	protein_coding	Atn1	ENSMUST00000133577	processed_transcript		6	-1	124745625	341
ENSMUSG00000096400	processed_pseudogene	Gm6098	ENSMUST00000180234	processed_pseudogene		3	-1	74242596	330
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000126903	nonsense_mediated_decay		12	1	76081939	778
ENSMUSG00000000416	protein_coding	Cttnbp2	ENSMUST00000141581	protein_coding		6	-1	18408694	580
ENSMUSG00000004263	protein_coding	Atn1	ENSMUST00000146872	protein_coding		6	-1	124756054	769
ENSMUSG00000028322	protein_coding	Exosc3	ENSMUST00000130843	processed_transcript		4	-1	45320604	825
ENSMUSG00000028792	protein_coding	Ak2	ENSMUST00000030583	protein_coding	principal4	4	1	128993224	986
ENSMUSG00000104227	processed_pseudogene	Gm37050	ENSMUST00000193464	processed_pseudogene		3	-1	74323992	466
ENSMUSG00000057176	protein_coding	Ccdc189	ENSMUST00000205839	protein_coding		7	-1	127586340	521
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000132161	nonsense_mediated_decay		12	1	76087760	3606
ENSMUSG00000000416	protein_coding	Cttnbp2	ENSMUST00000139557	retained_intron		6	-1	18514799	3982
ENSMUSG00000041609	protein_coding	Bicdl1	ENSMUST00000121746	protein_coding		5	-1	115652981	1568
ENSMUSG00000072772	protein_coding	Grcc10	ENSMUST00000129823	processed_transcript		6	-1	124740695	510
ENSMUSG00000118023	processed_pseudogene	Gm50363	ENSMUST00000237942	processed_pseudogene		19	-1	16572468	309
ENSMUSG00000000416	protein_coding	Cttnbp2	ENSMUST00000129669	protein_coding		6	-1	18513091	575
ENSMUSG00000071471	protein_coding	Krtap26-1	ENSMUST00000095934	protein_coding	principal1	16	-1	88647796	973
ENSMUSG00000030075	protein_coding	Cntn3	ENSMUST00000203619	protein_coding	principal1	6	-1	102573101	5294
ENSMUSG00000000416	protein_coding	Cttnbp2	ENSMUST00000142963	protein_coding		6	-1	18502056	328
ENSMUSG00000057176	protein_coding	Ccdc189	ENSMUST00000206891	retained_intron		7	-1	127585722	935
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000151286	retained_intron		12	1	76100901	742
ENSMUSG00000090515	protein_coding	Krtap27-1	ENSMUST00000165580	protein_coding	principal1	16	-1	88671671	646
ENSMUSG00000000416	protein_coding	Cttnbp2	ENSMUST00000140416	retained_intron		6	-1	18514843	620
ENSMUSG00000057176	protein_coding	Ccdc189	ENSMUST00000205850	retained_intron		7	-1	127588169	873
ENSMUSG00000030075	protein_coding	Cntn3	ENSMUST00000032159	protein_coding	principal1	6	-1	102464667	5183
ENSMUSG00000029671	protein_coding	Wnt16	ENSMUST00000031681	protein_coding	principal1	6	1	22288230	1663
ENSMUSG00000028309	protein_coding	Rnf20	ENSMUST00000029989	protein_coding	principal1	4	1	49632066	4154
ENSMUSG00000100541	unprocessed_pseudogene	Gm28871	ENSMUST00000186191	unprocessed_pseudogene		Y	-1	50183180	687
ENSMUSG00000057176	protein_coding	Ccdc189	ENSMUST00000206220	retained_intron		7	-1	127588380	1036
ENSMUSG00000116547	processed_pseudogene	Gm7667	ENSMUST00000231885	processed_pseudogene		16	-1	88682728	625
ENSMUSG00000041609	protein_coding	Bicdl1	ENSMUST00000141976	nonsense_mediated_decay		5	-1	115652986	595
ENSMUSG00000029578	protein_coding	Wipi2	ENSMUST00000197864	retained_intron		5	1	142627698	2793
ENSMUSG00000004788	protein_coding	Eif2b2	ENSMUST00000004910	protein_coding	principal1	12	1	85219481	1605
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000129575	processed_transcript		11	-1	120110446	905
ENSMUSG00000108092	TEC	Gm44189	ENSMUST00000204387	TEC		6	-1	102177112	3083
ENSMUSG00000063450	protein_coding	Syne2	ENSMUST00000044217	protein_coding	principal2	12	1	75818318	21690
ENSMUSG00000072772	protein_coding	Grcc10	ENSMUST00000004389	protein_coding	principal1	6	-1	124741374	863
ENSMUSG00000105796	processed_pseudogene	Gm42845	ENSMUST00000197766	processed_pseudogene		5	-1	87737210	105
ENSMUSG00000041609	protein_coding	Bicdl1	ENSMUST00000148276	protein_coding		5	-1	115670264	906
ENSMUSG00000028792	protein_coding	Ak2	ENSMUST00000102604	protein_coding	alternative1	4	1	128993224	1781
ENSMUSG00000029671	protein_coding	Wnt16	ENSMUST00000148639	protein_coding		6	1	22288288	1168
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000129710	processed_transcript		11	-1	120110458	928
ENSMUSG00000004788	protein_coding	Eif2b2	ENSMUST00000140900	protein_coding		12	1	85219504	742
ENSMUSG00000099714	processed_pseudogene	Gm20587	ENSMUST00000186367	processed_pseudogene		1	1	20821331	1186
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000129457	retained_intron		7	1	127573340	1426
ENSMUSG00000029671	protein_coding	Wnt16	ENSMUST00000176681	protein_coding		6	1	22288861	229
ENSMUSG00000004788	protein_coding	Eif2b2	ENSMUST00000136495	protein_coding		12	1	85219513	957
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000129128	processed_transcript		11	-1	120110327	792
ENSMUSG00000072772	protein_coding	Grcc10	ENSMUST00000140423	retained_intron		6	-1	124741065	1656
ENSMUSG00000050704	protein_coding	2310061N02Rik	ENSMUST00000050882	protein_coding	principal1	16	-1	88707962	794
ENSMUSG00000042064	protein_coding	Myo3b	ENSMUST00000112241	protein_coding		2	1	70096298	1319
ENSMUSG00000102121	lincRNA	Gm28065	ENSMUST00000185290	lincRNA		1	1	20836661	833
ENSMUSG00000004788	protein_coding	Eif2b2	ENSMUST00000150935	retained_intron		12	1	85219515	338
ENSMUSG00000072772	protein_coding	Grcc10	ENSMUST00000137318	retained_intron		6	-1	124740715	424
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000133464	nonsense_mediated_decay		7	1	100372246	4167
ENSMUSG00000028792	protein_coding	Ak2	ENSMUST00000152762	nonsense_mediated_decay		4	1	128993353	749
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000124997	processed_transcript		11	-1	120110338	785
ENSMUSG00000004788	protein_coding	Eif2b2	ENSMUST00000151925	retained_intron		12	1	85219546	793
ENSMUSG00000097934	lincRNA	6720483E21Rik	ENSMUST00000181654	lincRNA		1	-1	20890473	1120
ENSMUSG00000100167	lincRNA	Gm28207	ENSMUST00000187419	lincRNA		Y	1	56125273	1498
ENSMUSG00000041609	protein_coding	Bicdl1	ENSMUST00000148627	retained_intron		5	-1	115670530	2089
ENSMUSG00000028309	protein_coding	Rnf20	ENSMUST00000156314	protein_coding		4	1	49632060	2300
ENSMUSG00000056350	protein_coding	Krtap13-1	ENSMUST00000060494	protein_coding	principal1	16	1	88728862	750
ENSMUSG00000004788	protein_coding	Eif2b2	ENSMUST00000128709	retained_intron		12	1	85219582	935
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000028644	protein_coding	principal1	2	-1	93462502	1824
ENSMUSG00000004788	protein_coding	Eif2b2	ENSMUST00000130760	retained_intron		12	1	85224526	587
ENSMUSG00000100167	lincRNA	Gm28207	ENSMUST00000187260	lincRNA		Y	1	56125725	438
ENSMUSG00000100167	lincRNA	Gm28207	ENSMUST00000187657	lincRNA		Y	1	56125725	622
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000156559	retained_intron		7	1	100372281	1909
ENSMUSG00000107478	protein_coding	Gm45234	ENSMUST00000129411	nonsense_mediated_decay	principal1	6	-1	124756021	4359
ENSMUSG00000041609	protein_coding	Bicdl1	ENSMUST00000117847	processed_transcript		5	-1	115716559	1069
ENSMUSG00000038005	protein_coding	Hpf1	ENSMUST00000146863	protein_coding		8	1	60890418	531
ENSMUSG00000041609	protein_coding	Bicdl1	ENSMUST00000141950	protein_coding		5	-1	115731367	707
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000119647	protein_coding		7	1	100395799	4840
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000126772	processed_transcript		2	-1	93420287	463
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000208753	processed_transcript		7	1	100397031	1304
ENSMUSG00000092433	unprocessed_pseudogene	Vmn2r-ps40	ENSMUST00000174438	unprocessed_pseudogene		7	-1	7858604	2558
ENSMUSG00000028309	protein_coding	Rnf20	ENSMUST00000126675	processed_transcript		4	1	49632159	1904
ENSMUSG00000041609	protein_coding	Bicdl1	ENSMUST00000148840	retained_intron		5	-1	115731428	600
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000184753	retained_intron		7	1	100420505	2576
ENSMUSG00000114294	TEC	Gm47577	ENSMUST00000225757	TEC		13	1	97790564	2695
ENSMUSG00000028309	protein_coding	Rnf20	ENSMUST00000132782	processed_transcript		4	1	49632137	2238
ENSMUSG00000114348	lincRNA	Gm41031	ENSMUST00000224296	lincRNA		13	-1	97825885	653
ENSMUSG00000028309	protein_coding	Rnf20	ENSMUST00000146547	protein_coding		4	1	49632093	648
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000185051	processed_transcript		7	1	100429122	788
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000111257	protein_coding	principal1	2	-1	93452679	1003
ENSMUSG00000024697	protein_coding	Gna14	ENSMUST00000025602	protein_coding	principal1	19	1	16435762	3290
ENSMUSG00000103839	TEC	Gm37607	ENSMUST00000194925	TEC		1	-1	58386134	2623
ENSMUSG00000028309	protein_coding	Rnf20	ENSMUST00000140341	protein_coding		4	1	49632006	727
ENSMUSG00000024697	protein_coding	Gna14	ENSMUST00000237350	protein_coding		19	1	16439300	1377
ENSMUSG00000117699	processed_pseudogene	Gm8222	ENSMUST00000236751	processed_pseudogene		19	-1	16491064	543
ENSMUSG00000114061	lincRNA	Gm48626	ENSMUST00000220872	lincRNA		13	-1	35031946	883
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000123565	protein_coding		2	-1	93462386	777
ENSMUSG00000114474	lincRNA	Gm34388	ENSMUST00000225575	lincRNA		13	-1	97876662	2215
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000120196	protein_coding		7	1	100430150	3391
ENSMUSG00000028309	protein_coding	Rnf20	ENSMUST00000149862	processed_transcript		4	1	49641718	966
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000145553	protein_coding		2	-1	93452683	693
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000150508	protein_coding		2	-1	93461912	647
ENSMUSG00000028309	protein_coding	Rnf20	ENSMUST00000131962	processed_transcript		4	1	49650263	488
ENSMUSG00000113738	lincRNA	Gm40910	ENSMUST00000221012	lincRNA		13	1	35052727	364
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000111256	protein_coding		2	-1	93463140	592
ENSMUSG00000113738	lincRNA	Gm40910	ENSMUST00000223077	lincRNA		13	1	35078489	569
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000184779	retained_intron		7	1	100443353	660
ENSMUSG00000028309	protein_coding	Rnf20	ENSMUST00000138490	processed_transcript		4	1	49650968	610
ENSMUSG00000114233	lincRNA	Gm48629	ENSMUST00000225041	lincRNA		13	1	35065461	598
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000154444	processed_transcript		11	-1	120151279	554
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000144168	processed_transcript		2	-1	93462443	729
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000185084	nonsense_mediated_decay		7	1	100448805	600
ENSMUSG00000106971	processed_pseudogene	Gm42965	ENSMUST00000201254	processed_pseudogene		5	-1	33682974	250
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000124804	protein_coding		2	-1	93462912	366
ENSMUSG00000028309	protein_coding	Rnf20	ENSMUST00000167496	protein_coding	principal1	4	1	49632060	4312
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000076697	protein_coding	alternative2	11	-1	120151346	1672
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000184657	retained_intron		7	1	100451338	639
ENSMUSG00000027215	protein_coding	Cd82	ENSMUST00000116457	protein_coding	principal1	2	-1	93462946	1683
ENSMUSG00000108589	unprocessed_pseudogene	Gm45225	ENSMUST00000206852	unprocessed_pseudogene		7	1	25981502	1139
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000151573	processed_transcript		7	1	100464211	879
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000208018	processed_transcript		7	1	100465407	925
ENSMUSG00000047248	protein_coding	C2cd3	ENSMUST00000098259	protein_coding	alternative2	7	1	100372233	6602
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000053692	protein_coding	alternative2	11	-1	120151346	1947
ENSMUSG00000038005	protein_coding	Hpf1	ENSMUST00000149267	nonsense_mediated_decay		8	1	60890445	1000
ENSMUSG00000109046	processed_pseudogene	Gm44571	ENSMUST00000208092	processed_pseudogene		7	1	100381594	533
ENSMUSG00000013622	protein_coding	Atraid	ENSMUST00000013766	protein_coding	principal2	5	1	31048635	966
ENSMUSG00000046805	protein_coding	Mpeg1	ENSMUST00000081035	protein_coding	principal1	19	1	12460779	4334
ENSMUSG00000032942	protein_coding	Ucp3	ENSMUST00000128044	retained_intron		7	1	100472990	2129
ENSMUSG00000013622	protein_coding	Atraid	ENSMUST00000201773	protein_coding		5	1	31048648	455
ENSMUSG00000107046	processed_pseudogene	Gm43849	ENSMUST00000201086	processed_pseudogene		5	1	33049985	215
ENSMUSG00000038005	protein_coding	Hpf1	ENSMUST00000136098	nonsense_mediated_decay		8	1	60890451	871
ENSMUSG00000038141	protein_coding	Tmem181a	ENSMUST00000232383	protein_coding	alternative2	17	1	6256860	4499
ENSMUSG00000093885	processed_pseudogene	Rpl35a-ps5	ENSMUST00000137013	processed_pseudogene		5	1	33076038	333
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000146383	nonsense_mediated_decay		7	1	127573380	819
ENSMUSG00000042371	protein_coding	Slc5a10	ENSMUST00000151780	protein_coding		11	-1	61719946	1927
ENSMUSG00000013622	protein_coding	Atraid	ENSMUST00000200942	nonsense_mediated_decay		5	1	31048659	840
ENSMUSG00000018750	protein_coding	Zbtb4	ENSMUST00000108640	protein_coding	principal1	11	1	69765912	4067
ENSMUSG00000013622	protein_coding	Atraid	ENSMUST00000200748	protein_coding	alternative2	5	1	31048722	548
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000205633	nonsense_mediated_decay		7	1	127573402	755
ENSMUSG00000013622	protein_coding	Atraid	ENSMUST00000201136	protein_coding	alternative2	5	1	31048785	894
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000132239	processed_transcript		11	-1	120151320	858
ENSMUSG00000042371	protein_coding	Slc5a10	ENSMUST00000051552	protein_coding	principal1	11	-1	61720799	2261
ENSMUSG00000038141	protein_coding	Tmem181a	ENSMUST00000228334	processed_transcript		17	1	6256950	5669
ENSMUSG00000013622	protein_coding	Atraid	ENSMUST00000200800	processed_transcript		5	1	31053870	550
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000151908	retained_intron		7	1	127573404	1918
ENSMUSG00000042371	protein_coding	Slc5a10	ENSMUST00000148584	protein_coding	principal1	11	-1	61719997	2049
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000150315	processed_transcript		11	-1	120151287	874
ENSMUSG00000038141	protein_coding	Tmem181a	ENSMUST00000088940	protein_coding	principal2	17	1	6270470	4405
ENSMUSG00000025225	protein_coding	Nfkb2	ENSMUST00000237330	protein_coding	alternative2	19	1	46304320	3846
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000135605	processed_transcript		11	-1	120151322	711
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000152859	processed_transcript		11	-1	120142784	328
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000225427	protein_coding	principal2	19	1	5050481	4503
ENSMUSG00000035572	protein_coding	Dcaf10	ENSMUST00000155551	protein_coding	principal1	4	1	45342101	7250
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000224254	retained_intron		19	1	5050785	497
ENSMUSG00000062797	protein_coding	Hikeshi	ENSMUST00000153470	protein_coding	principal1	7	-1	89941204	2224
ENSMUSG00000038141	protein_coding	Tmem181a	ENSMUST00000231593	processed_transcript		17	1	6297603	1517
ENSMUSG00000061306	protein_coding	Slc38a10	ENSMUST00000179094	protein_coding	alternative2	11	-1	120151312	4052
ENSMUSG00000035572	protein_coding	Dcaf10	ENSMUST00000107798	processed_transcript		4	1	45342182	2421
ENSMUSG00000038005	protein_coding	Hpf1	ENSMUST00000037190	protein_coding	principal1	8	1	60890451	1191
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000114242	protein_coding	principal2	17	-1	34121747	4483
ENSMUSG00000030345	protein_coding	Dyrk4	ENSMUST00000078521	protein_coding	principal1	6	-1	126921839	2252
ENSMUSG00000025225	protein_coding	Nfkb2	ENSMUST00000073116	protein_coding	principal2	19	1	46304744	2979
ENSMUSG00000092074	protein_coding	Dynlt1a	ENSMUST00000232591	retained_intron		17	-1	6317418	3541
ENSMUSG00000032942	protein_coding	Ucp3	ENSMUST00000032958	protein_coding	principal1	7	1	100472991	2448
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000224178	protein_coding		19	1	5050787	405
ENSMUSG00000062797	protein_coding	Hikeshi	ENSMUST00000207309	protein_coding		7	-1	89941126	835
ENSMUSG00000018750	protein_coding	Zbtb4	ENSMUST00000108639	protein_coding	principal1	11	1	69765922	7811
ENSMUSG00000039982	protein_coding	Dtx4	ENSMUST00000045521	protein_coding	principal1	19	-1	12501454	5226
ENSMUSG00000025225	protein_coding	Nfkb2	ENSMUST00000236591	protein_coding	principal2	19	1	46304800	3132
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000237816	retained_intron		19	1	5050801	439
ENSMUSG00000035572	protein_coding	Dcaf10	ENSMUST00000153803	protein_coding		4	1	45370346	2068
ENSMUSG00000038005	protein_coding	Hpf1	ENSMUST00000134886	retained_intron		8	1	60890489	709
ENSMUSG00000030345	protein_coding	Dyrk4	ENSMUST00000171945	nonsense_mediated_decay		6	-1	126885384	823
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000025193	protein_coding	principal2	17	-1	34122600	4657
ENSMUSG00000018750	protein_coding	Zbtb4	ENSMUST00000108642	protein_coding		11	1	69765994	904
ENSMUSG00000032942	protein_coding	Ucp3	ENSMUST00000107059	protein_coding	principal1	7	1	100472993	1260
ENSMUSG00000024187	protein_coding	Fam234a	ENSMUST00000114988	protein_coding	principal2	17	-1	26244223	3714
ENSMUSG00000038005	protein_coding	Hpf1	ENSMUST00000209553	retained_intron		8	1	60905079	1582
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000225203	retained_intron		19	1	5050813	430
ENSMUSG00000018750	protein_coding	Zbtb4	ENSMUST00000156932	protein_coding		11	1	69766016	554
ENSMUSG00000038005	protein_coding	Hpf1	ENSMUST00000211016	retained_intron		8	1	60906031	2641
ENSMUSG00000035572	protein_coding	Dcaf10	ENSMUST00000130821	processed_transcript		4	1	45342120	896
ENSMUSG00000025626	protein_coding	Phf6	ENSMUST00000078944	protein_coding	principal1	X	1	52912266	4350
ENSMUSG00000004837	protein_coding	Grap	ENSMUST00000004959	protein_coding	principal1	11	1	61653265	1662
ENSMUSG00000083541	processed_pseudogene	Gm12585	ENSMUST00000117307	processed_pseudogene		4	-1	45339034	290
ENSMUSG00000045877	lincRNA	4933415A04Rik	ENSMUST00000056256	lincRNA		11	1	43587040	2009
ENSMUSG00000032942	protein_coding	Ucp3	ENSMUST00000133850	retained_intron		7	1	100472994	1615
ENSMUSG00000004837	protein_coding	Grap	ENSMUST00000155380	processed_transcript		11	1	61669046	176
ENSMUSG00000018750	protein_coding	Zbtb4	ENSMUST00000132528	protein_coding		11	1	69766449	433
ENSMUSG00000025225	protein_coding	Nfkb2	ENSMUST00000111881	protein_coding	principal2	19	1	46305696	3141
ENSMUSG00000108413	lincRNA	BC026762	ENSMUST00000206555	lincRNA		7	1	26009889	2503
ENSMUSG00000024187	protein_coding	Fam234a	ENSMUST00000234262	protein_coding	principal2	17	-1	26244168	2774
ENSMUSG00000025626	protein_coding	Phf6	ENSMUST00000101587	protein_coding		X	1	52912295	3639
ENSMUSG00000062797	protein_coding	Hikeshi	ENSMUST00000078918	nonsense_mediated_decay		7	-1	89941066	1053
ENSMUSG00000076461	TR_V_gene	Trbv1	ENSMUST00000103262	TR_V_gene	principal1	6	1	40891229	417
ENSMUSG00000029578	protein_coding	Wipi2	ENSMUST00000036872	protein_coding		5	1	142629542	5171
ENSMUSG00000018750	protein_coding	Zbtb4	ENSMUST00000153943	protein_coding		11	1	69766544	429
ENSMUSG00000042377	protein_coding	Fam83g	ENSMUST00000070453	processed_transcript		11	1	61684091	2484
ENSMUSG00000042064	protein_coding	Myo3b	ENSMUST00000112243	protein_coding	alternative2	2	1	70083074	6213
ENSMUSG00000108606	unprocessed_pseudogene	Cyp2b27-ps	ENSMUST00000205582	unprocessed_pseudogene		7	-1	26028906	1279
ENSMUSG00000025626	protein_coding	Phf6	ENSMUST00000154864	protein_coding		X	1	52912295	3057
ENSMUSG00000024187	protein_coding	Fam234a	ENSMUST00000234554	protein_coding	principal2	17	-1	26244222	2828
ENSMUSG00000025626	protein_coding	Phf6	ENSMUST00000177780	processed_transcript		X	1	52924569	404
ENSMUSG00000025626	protein_coding	Phf6	ENSMUST00000179014	processed_transcript		X	1	52924571	377
ENSMUSG00000062797	protein_coding	Hikeshi	ENSMUST00000208357	processed_transcript		7	-1	89941199	806
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000174373	processed_transcript		7	1	141122382	899
ENSMUSG00000030345	protein_coding	Dyrk4	ENSMUST00000032495	processed_transcript		6	-1	126907511	2118
ENSMUSG00000018750	protein_coding	Zbtb4	ENSMUST00000108638	protein_coding		11	1	69775406	2552
ENSMUSG00000029465	protein_coding	Arpc3	ENSMUST00000102525	protein_coding	principal1	5	1	122391878	899
ENSMUSG00000005417	protein_coding	Mprip	ENSMUST00000066330	protein_coding	alternative2	11	1	59662507	7765
ENSMUSG00000092074	protein_coding	Dynlt1a	ENSMUST00000232499	protein_coding		17	-1	6317418	640
ENSMUSG00000024187	protein_coding	Fam234a	ENSMUST00000234687	protein_coding	principal2	17	-1	26244214	2833
ENSMUSG00000062797	protein_coding	Hikeshi	ENSMUST00000075010	protein_coding		7	-1	89941022	715
ENSMUSG00000039785	protein_coding	Defb5	ENSMUST00000110763	protein_coding	principal1	8	1	19247580	207
ENSMUSG00000024187	protein_coding	Fam234a	ENSMUST00000141240	protein_coding	alternative2	17	-1	26244223	2696
ENSMUSG00000029578	protein_coding	Wipi2	ENSMUST00000153936	retained_intron		5	1	142629591	3244
ENSMUSG00000042064	protein_coding	Myo3b	ENSMUST00000060208	protein_coding	principal2	2	1	70039126	6256
ENSMUSG00000062797	protein_coding	Hikeshi	ENSMUST00000150740	protein_coding		7	-1	89923715	772
ENSMUSG00000029465	protein_coding	Arpc3	ENSMUST00000148913	retained_intron		5	1	122391922	856
ENSMUSG00000029578	protein_coding	Wipi2	ENSMUST00000110778	protein_coding	principal1	5	1	142629593	1959
ENSMUSG00000111118	processed_pseudogene	Gm6545	ENSMUST00000217186	processed_pseudogene		19	-1	12530540	1786
ENSMUSG00000062797	protein_coding	Hikeshi	ENSMUST00000130609	protein_coding		7	-1	89941165	364
ENSMUSG00000081901	unprocessed_pseudogene	Gm15357	ENSMUST00000119160	unprocessed_pseudogene		8	-1	19279846	285
ENSMUSG00000084836	processed_pseudogene	Gm16274	ENSMUST00000139251	processed_pseudogene		19	-1	12568826	592
ENSMUSG00000029465	protein_coding	Arpc3	ENSMUST00000141395	retained_intron		5	1	122391966	409
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000237762	nonsense_mediated_decay		19	1	5050813	463
ENSMUSG00000092074	protein_coding	Dynlt1a	ENSMUST00000169415	protein_coding	principal1	17	-1	6317500	3321
ENSMUSG00000063696	processed_pseudogene	Gm8730	ENSMUST00000076373	processed_pseudogene		8	-1	102865798	954
ENSMUSG00000062797	protein_coding	Hikeshi	ENSMUST00000207695	retained_intron		7	-1	89941163	2539
ENSMUSG00000024187	protein_coding	Fam234a	ENSMUST00000234175	protein_coding	principal2	17	-1	26244242	2749
ENSMUSG00000083303	processed_pseudogene	Gm12110	ENSMUST00000121601	processed_pseudogene		11	-1	32880940	579
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000224288	nonsense_mediated_decay		19	1	5050813	451
ENSMUSG00000029578	protein_coding	Wipi2	ENSMUST00000143980	retained_intron		5	1	142662514	949
ENSMUSG00000029465	protein_coding	Arpc3	ENSMUST00000031421	protein_coding		5	1	122395814	736
ENSMUSG00000114761	lincRNA	Gm47242	ENSMUST00000224027	lincRNA		19	-1	12540823	475
ENSMUSG00000102809	processed_pseudogene	Gm8643	ENSMUST00000195228	processed_pseudogene		3	1	74814718	625
ENSMUSG00000108584	sense_overlapping	Gm45216	ENSMUST00000205547	sense_overlapping		6	1	91522409	600
ENSMUSG00000029465	protein_coding	Arpc3	ENSMUST00000196969	protein_coding		5	1	122396867	599
ENSMUSG00000109848	lincRNA	Gm45391	ENSMUST00000211563	lincRNA		8	-1	103144946	576
ENSMUSG00000114644	lincRNA	Gm47243	ENSMUST00000226106	lincRNA		19	1	12519800	448
ENSMUSG00000106527	processed_pseudogene	Gm43671	ENSMUST00000200422	processed_pseudogene		3	1	22021197	433
ENSMUSG00000081254	processed_pseudogene	Gm12112	ENSMUST00000117772	processed_pseudogene		11	1	32910373	231
ENSMUSG00000042377	protein_coding	Fam83g	ENSMUST00000093019	protein_coding	principal1	11	1	61684419	4778
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000224363	retained_intron		19	1	5050814	698
ENSMUSG00000102420	TEC	Gm37464	ENSMUST00000192431	TEC		3	-1	75024615	2220
ENSMUSG00000024187	protein_coding	Fam234a	ENSMUST00000118487	protein_coding	principal2	17	-1	26244141	2629
ENSMUSG00000086213	processed_transcript	A330040F15Rik	ENSMUST00000224046	antisense		19	-1	12596519	1918
ENSMUSG00000085402	lincRNA	Gm12111	ENSMUST00000150073	lincRNA		11	-1	32926160	349
ENSMUSG00000109701	lincRNA	Gm32531	ENSMUST00000209324	lincRNA		8	1	103271391	373
ENSMUSG00000086213	processed_transcript	A330040F15Rik	ENSMUST00000136697	retained_intron		19	-1	12596566	1106
ENSMUSG00000029465	protein_coding	Arpc3	ENSMUST00000111716	protein_coding		5	1	122400271	838
ENSMUSG00000006360	protein_coding	Crip1	ENSMUST00000198597	processed_transcript		12	1	113146316	552
ENSMUSG00000107284	TEC	Gm43280	ENSMUST00000202958	TEC		5	1	66718370	1550
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000236248	retained_intron		19	1	5050826	462
ENSMUSG00000001270	protein_coding	Ckb	ENSMUST00000222705	retained_intron		12	-1	111672282	2839
ENSMUSG00000029465	protein_coding	Arpc3	ENSMUST00000111713	protein_coding		5	1	122400398	708
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000238025	processed_transcript		19	1	5050826	459
ENSMUSG00000024187	protein_coding	Fam234a	ENSMUST00000153582	retained_intron		17	-1	26216958	649
ENSMUSG00000024187	protein_coding	Fam234a	ENSMUST00000151293	protein_coding		17	-1	26220580	340
ENSMUSG00000106019	lincRNA	Gm43672	ENSMUST00000199072	lincRNA		3	-1	22076142	1731
ENSMUSG00000029465	protein_coding	Arpc3	ENSMUST00000126247	retained_intron		5	1	122403414	672
ENSMUSG00000110340	lincRNA	1600027J07Rik	ENSMUST00000209501	lincRNA		8	-1	103347534	489
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000225799	protein_coding		19	1	5050830	545
ENSMUSG00000106176	processed_pseudogene	Gm43730	ENSMUST00000199863	processed_pseudogene		3	-1	58315310	372
ENSMUSG00000109699	lincRNA	Gm45277	ENSMUST00000210549	lincRNA		8	-1	103563623	1695
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000025818	protein_coding	alternative2	19	1	5050833	4184
ENSMUSG00000105154	processed_pseudogene	Gm20128	ENSMUST00000196189	processed_pseudogene		3	1	58404701	417
ENSMUSG00000074165	protein_coding	Zfp788	ENSMUST00000154942	protein_coding		7	1	41633203	581
ENSMUSG00000030718	protein_coding	Ppme1	ENSMUST00000207634	protein_coding		7	-1	100345050	673
ENSMUSG00000116804	processed_pseudogene	Gm5223	ENSMUST00000231738	processed_pseudogene		17	1	16781621	1267
ENSMUSG00000116623	processed_pseudogene	Gm49775	ENSMUST00000231561	processed_pseudogene		17	1	16868918	265
ENSMUSG00000110336	lincRNA	4933400L20Rik	ENSMUST00000209714	lincRNA		8	1	103603782	211
ENSMUSG00000075151	protein_coding	Olfr1136	ENSMUST00000077471	protein_coding	principal1	2	-1	87693947	1067
ENSMUSG00000102690	TEC	Gm37779	ENSMUST00000194221	TEC		1	-1	105891012	3380
ENSMUSG00000116545	processed_pseudogene	Eif3s6-ps3	ENSMUST00000231929	processed_pseudogene		17	1	15845280	1349
ENSMUSG00000024883	protein_coding	Rin1	ENSMUST00000224032	protein_coding	alternative2	19	1	5053105	579
ENSMUSG00000039775	protein_coding	Defb3	ENSMUST00000033852	protein_coding	principal1	8	1	19293360	275
ENSMUSG00000099448	processed_pseudogene	Gm18801	ENSMUST00000186616	processed_pseudogene		1	-1	105956310	536
ENSMUSG00000116590	lincRNA	AC154200.1	ENSMUST00000232288	lincRNA		17	-1	17374206	2755
ENSMUSG00000110336	lincRNA	4933400L20Rik	ENSMUST00000211119	lincRNA		8	1	103603799	870
ENSMUSG00000024691	protein_coding	Fam111a	ENSMUST00000139270	processed_transcript		19	1	12545740	386
ENSMUSG00000075150	protein_coding	Olfr1137	ENSMUST00000214209	protein_coding	principal1	2	-1	87713179	3073
ENSMUSG00000097379	antisense	Gm26873	ENSMUST00000181390	antisense		17	-1	17411993	2529
ENSMUSG00000110019	processed_pseudogene	Gm8748	ENSMUST00000211125	processed_pseudogene		8	1	104071149	587
ENSMUSG00000116958	processed_pseudogene	Gm6705	ENSMUST00000231260	processed_pseudogene		17	1	16847395	685
ENSMUSG00000075150	protein_coding	Olfr1137	ENSMUST00000099850	protein_coding	principal1	2	-1	87711904	933
ENSMUSG00000100144	lincRNA	Gm28208	ENSMUST00000185941	lincRNA		Y	1	56166623	1157
ENSMUSG00000024271	protein_coding	Elp2	ENSMUST00000234266	protein_coding	principal1	18	1	24603961	3466
ENSMUSG00000097533	antisense	Gm26590	ENSMUST00000180857	antisense		14	1	52197502	1277
ENSMUSG00000075149	protein_coding	Olfr1138	ENSMUST00000214573	protein_coding	principal1	2	-1	87739978	1611
ENSMUSG00000074165	protein_coding	Zfp788	ENSMUST00000100275	protein_coding		7	1	41633531	3177
ENSMUSG00000097533	antisense	Gm26590	ENSMUST00000227448	antisense		14	1	52202162	643
ENSMUSG00000110053	antisense	Gm29682	ENSMUST00000210896	antisense		8	-1	104105873	1251
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000033086	protein_coding	principal1	7	1	127573404	1570
ENSMUSG00000075149	protein_coding	Olfr1138	ENSMUST00000099848	protein_coding	principal1	2	-1	87738322	936
ENSMUSG00000024691	protein_coding	Fam111a	ENSMUST00000144662	protein_coding	principal3	19	1	12568198	3912
ENSMUSG00000086564	protein_coding	Cd101	ENSMUST00000147399	protein_coding	principal2	3	-1	101029556	3299
ENSMUSG00000100144	lincRNA	Gm28208	ENSMUST00000191573	lincRNA		Y	1	56166732	437
ENSMUSG00000115017	processed_pseudogene	Gm2573	ENSMUST00000228426	processed_pseudogene		15	1	12181147	318
ENSMUSG00000100144	lincRNA	Gm28208	ENSMUST00000190539	lincRNA		Y	1	56166732	621
ENSMUSG00000025225	protein_coding	Nfkb2	ENSMUST00000237761	retained_intron		19	1	46305998	2837
ENSMUSG00000024691	protein_coding	Fam111a	ENSMUST00000151307	protein_coding	alternative2	19	1	12568198	3687
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000121004	protein_coding	principal1	7	1	127573529	1840
ENSMUSG00000025225	protein_coding	Nfkb2	ENSMUST00000236820	retained_intron		19	1	46305998	2827
ENSMUSG00000024271	protein_coding	Elp2	ENSMUST00000234484	retained_intron		18	1	24603963	673
ENSMUSG00000006360	protein_coding	Crip1	ENSMUST00000199089	protein_coding		12	1	113148705	509
ENSMUSG00000021215	protein_coding	Net1	ENSMUST00000099946	protein_coding	alternative2	13	-1	3893578	3871
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000154232	nonsense_mediated_decay		17	-1	34120411	4520
ENSMUSG00000086564	protein_coding	Cd101	ENSMUST00000167086	protein_coding	alternative2	3	-1	101022176	3223
ENSMUSG00000024691	protein_coding	Fam111a	ENSMUST00000025595	protein_coding	principal3	19	1	12573523	3267
ENSMUSG00000024271	protein_coding	Elp2	ENSMUST00000025120	protein_coding		18	1	24603963	2497
ENSMUSG00000025225	protein_coding	Nfkb2	ENSMUST00000237791	nonsense_mediated_decay		19	1	46305998	2636
ENSMUSG00000074165	protein_coding	Zfp788	ENSMUST00000131180	protein_coding		7	1	41633556	813
ENSMUSG00000025225	protein_coding	Nfkb2	ENSMUST00000235868	processed_transcript		19	1	46306121	384
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000154891	nonsense_mediated_decay		7	1	127573583	1722
ENSMUSG00000074165	protein_coding	Zfp788	ENSMUST00000140964	protein_coding		7	1	41633558	1169
ENSMUSG00000024271	protein_coding	Elp2	ENSMUST00000234847	retained_intron		18	1	24603985	2527
ENSMUSG00000021215	protein_coding	Net1	ENSMUST00000222504	protein_coding		13	-1	3893433	447
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000095347	protein_coding	alternative2	17	-1	34118489	2617
ENSMUSG00000102103	unprocessed_pseudogene	Gm21851	ENSMUST00000190752	unprocessed_pseudogene		Y	-1	56250153	696
ENSMUSG00000051936	protein_coding	Prss58	ENSMUST00000063523	protein_coding	principal1	6	-1	40900387	979
ENSMUSG00000118087	bidirectional_promoter_lncRNA	4833438C02Rik	ENSMUST00000235942	bidirectional_promoter_lncRNA		19	-1	46305611	1764
ENSMUSG00000074165	protein_coding	Zfp788	ENSMUST00000045720	protein_coding	alternative2	7	1	41633564	3058
ENSMUSG00000024271	protein_coding	Elp2	ENSMUST00000234164	retained_intron		18	1	24615204	737
ENSMUSG00000074165	protein_coding	Zfp788	ENSMUST00000098508	protein_coding	principal5	7	1	41633577	3775
ENSMUSG00000024271	protein_coding	Elp2	ENSMUST00000234014	retained_intron		18	1	24615974	757
ENSMUSG00000118087	bidirectional_promoter_lncRNA	4833438C02Rik	ENSMUST00000236655	bidirectional_promoter_lncRNA		19	-1	46305605	353
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000236090	retained_intron		17	-1	34113853	1109
ENSMUSG00000081154	transcribed_processed_pseudogene	Defa-ps13	ENSMUST00000120695	transcribed_processed_pseudogene		8	1	19300677	204
ENSMUSG00000081154	transcribed_processed_pseudogene	Defa-ps13	ENSMUST00000212360	processed_transcript		8	1	19300677	204
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000138158	retained_intron		7	1	127573642	1246
ENSMUSG00000074165	protein_coding	Zfp788	ENSMUST00000170770	protein_coding		7	1	41647584	2499
ENSMUSG00000006360	protein_coding	Crip1	ENSMUST00000200553	protein_coding	principal1	12	1	113152053	516
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000142570	retained_intron		17	-1	34113732	961
ENSMUSG00000112093	bidirectional_promoter_lncRNA	Gm47941	ENSMUST00000220423	bidirectional_promoter_lncRNA		12	-1	80790343	625
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000206818	nonsense_mediated_decay		7	1	127577975	976
ENSMUSG00000024271	protein_coding	Elp2	ENSMUST00000234351	retained_intron		18	1	24626186	627
ENSMUSG00000082710	unprocessed_pseudogene	Defa-ps14	ENSMUST00000121373	unprocessed_pseudogene		8	1	19422506	418
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000236978	protein_coding	principal2	19	-1	5771419	2731
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000148143	retained_intron		17	-1	34114951	975
ENSMUSG00000006360	protein_coding	Crip1	ENSMUST00000196932	retained_intron		12	1	113152071	1809
ENSMUSG00000006360	protein_coding	Crip1	ENSMUST00000198909	retained_intron		12	1	113152081	1505
ENSMUSG00000001270	protein_coding	Ckb	ENSMUST00000001304	protein_coding	principal1	12	-1	111672338	1472
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000133621	retained_intron		7	1	127579280	834
ENSMUSG00000031004	protein_coding	Mki67	ENSMUST00000033310	protein_coding	principal1	7	-1	135716361	10061
ENSMUSG00000081076	processed_pseudogene	Rpsa-ps4	ENSMUST00000121691	processed_pseudogene		11	-1	33039703	888
ENSMUSG00000034192	protein_coding	Lsm3	ENSMUST00000040607	protein_coding	principal1	6	1	91515928	743
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000235347	retained_intron		17	-1	34114710	684
ENSMUSG00000030815	protein_coding	Phkg2	ENSMUST00000149853	retained_intron		7	1	127582096	511
ENSMUSG00000074155	protein_coding	Klk5	ENSMUST00000205919	protein_coding		7	1	43841971	316
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000173032	protein_coding		17	-1	34114977	406
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000235599	nonsense_mediated_decay		19	-1	5771401	2719
ENSMUSG00000087318	lincRNA	Gm12114	ENSMUST00000147896	lincRNA		11	1	33068551	656
ENSMUSG00000020405	protein_coding	Fabp6	ENSMUST00000020672	protein_coding	principal1	11	-1	43601540	479
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000025890	protein_coding	alternative2	19	-1	5771401	2586
ENSMUSG00000031004	protein_coding	Mki67	ENSMUST00000211238	protein_coding		7	-1	135710911	575
ENSMUSG00000091651	protein_coding	Vmn2r36	ENSMUST00000170402	protein_coding	principal1	7	-1	7902495	3291
ENSMUSG00000034192	protein_coding	Lsm3	ENSMUST00000126253	retained_intron		6	1	91515957	520
ENSMUSG00000094651	protein_coding	Gal3st2	ENSMUST00000190710	processed_transcript		1	1	93861306	353
ENSMUSG00000006360	protein_coding	Crip1	ENSMUST00000006523	protein_coding	principal1	12	1	113152012	445
ENSMUSG00000021876	protein_coding	Rnase4	ENSMUST00000022428	protein_coding	principal1	14	1	51091077	1518
ENSMUSG00000001270	protein_coding	Ckb	ENSMUST00000223099	retained_intron		12	-1	111671544	942
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000173204	nonsense_mediated_decay		17	-1	34115076	771
ENSMUSG00000021215	protein_coding	Net1	ENSMUST00000091853	protein_coding	principal3	13	-1	3918220	2680
ENSMUSG00000001270	protein_coding	Ckb	ENSMUST00000220888	retained_intron		12	-1	111671485	453
ENSMUSG00000109910	TEC	Gm45240	ENSMUST00000211437	TEC		7	1	135709194	674
ENSMUSG00000034192	protein_coding	Lsm3	ENSMUST00000205609	retained_intron		6	1	91515977	2032
ENSMUSG00000001270	protein_coding	Ckb	ENSMUST00000222513	retained_intron		12	-1	111672283	719
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000236773	protein_coding		19	-1	5771398	2395
ENSMUSG00000047786	protein_coding	Lix1	ENSMUST00000115576	protein_coding	principal1	17	1	17402672	3116
ENSMUSG00000031471	protein_coding	Defb8	ENSMUST00000033854	protein_coding	principal1	8	-1	19447606	287
ENSMUSG00000099527	unprocessed_pseudogene	Gm21819	ENSMUST00000187438	unprocessed_pseudogene		Y	-1	56324320	696
ENSMUSG00000034192	protein_coding	Lsm3	ENSMUST00000123569	retained_intron		6	1	91516047	504
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000027886	protein_coding	alternative2	1	-1	156939543	4237
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000235313	nonsense_mediated_decay		17	-1	34115242	638
ENSMUSG00000021215	protein_coding	Net1	ENSMUST00000220887	retained_intron		13	-1	3887551	763
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000235615	retained_intron		19	-1	5759974	588
ENSMUSG00000047786	protein_coding	Lix1	ENSMUST00000140134	protein_coding		17	1	17448820	2678
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000151986	protein_coding		17	-1	34121988	4482
ENSMUSG00000109831	lincRNA	Gm36431	ENSMUST00000209956	lincRNA		7	1	135742676	687
ENSMUSG00000116614	processed_pseudogene	Gm46610	ENSMUST00000231650	processed_pseudogene		17	-1	16321100	471
ENSMUSG00000021215	protein_coding	Net1	ENSMUST00000222442	retained_intron		13	-1	3887825	519
ENSMUSG00000118202	lincRNA	C030017B01Rik	ENSMUST00000237191	lincRNA		18	1	40539786	3241
ENSMUSG00000074155	protein_coding	Klk5	ENSMUST00000048444	protein_coding	principal1	7	1	43842269	1239
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000237453	protein_coding		19	-1	5761776	585
ENSMUSG00000116944	processed_pseudogene	Gm7477	ENSMUST00000231367	processed_pseudogene		17	1	16726453	664
ENSMUSG00000116864	processed_pseudogene	Gm3320	ENSMUST00000231447	processed_pseudogene		17	-1	16670186	1031
ENSMUSG00000021876	protein_coding	Rnase4	ENSMUST00000169895	protein_coding	principal1	14	1	51096359	1460
ENSMUSG00000021215	protein_coding	Net1	ENSMUST00000222017	retained_intron		13	-1	3893543	569
ENSMUSG00000034192	protein_coding	Lsm3	ENSMUST00000206947	protein_coding	principal1	6	1	91516048	618
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000155286	retained_intron		17	-1	34115470	610
ENSMUSG00000095150	processed_pseudogene	Rps19-ps13	ENSMUST00000180504	processed_pseudogene		18	1	40726269	441
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000236275	retained_intron		19	-1	5766233	622
ENSMUSG00000117847	lincRNA	Gm31205	ENSMUST00000237626	lincRNA		18	1	40721504	568
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000236781	retained_intron		17	-1	34116436	654
ENSMUSG00000021215	protein_coding	Net1	ENSMUST00000223258	protein_coding		13	-1	3918178	597
ENSMUSG00000109831	lincRNA	Gm36431	ENSMUST00000209706	lincRNA		7	1	135769590	754
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000236297	protein_coding		19	-1	5771369	717
ENSMUSG00000053146	protein_coding	Olfr352	ENSMUST00000217325	protein_coding	principal1	2	1	36868460	3337
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000237872	retained_intron		17	-1	34117195	747
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000235698	nonsense_mediated_decay		19	-1	5770292	467
ENSMUSG00000113128	TEC	Gm47813	ENSMUST00000223370	TEC		13	-1	3900248	1040
ENSMUSG00000053146	protein_coding	Olfr352	ENSMUST00000065416	protein_coding	principal1	2	1	36869568	948
ENSMUSG00000030718	protein_coding	Ppme1	ENSMUST00000032963	protein_coding	principal1	7	-1	100372307	2772
ENSMUSG00000105660	TEC	Gm42975	ENSMUST00000200612	TEC		5	1	16605722	1491
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000237345	processed_transcript		17	-1	34120911	442
ENSMUSG00000072115	protein_coding	Ang	ENSMUST00000171688	protein_coding	principal1	14	1	51091150	728
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000179722	processed_transcript		17	-1	34121950	463
ENSMUSG00000005417	protein_coding	Mprip	ENSMUST00000108751	protein_coding	alternative2	11	1	59662507	4021
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000177828	processed_transcript		17	-1	34122619	396
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000236568	processed_transcript		19	-1	5771267	423
ENSMUSG00000024335	protein_coding	Brd2	ENSMUST00000179687	processed_transcript		17	-1	34122634	366
ENSMUSG00000031871	protein_coding	Cdh5	ENSMUST00000034339	protein_coding	principal1	8	1	104101625	3995
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000235561	protein_coding		19	-1	5770947	548
ENSMUSG00000030718	protein_coding	Ppme1	ENSMUST00000207622	retained_intron		7	-1	100335278	942
ENSMUSG00000094651	protein_coding	Gal3st2	ENSMUST00000094663	protein_coding	principal1	1	1	93861346	2844
ENSMUSG00000002265	protein_coding	Peg3	ENSMUST00000239104	protein_coding	alternative2	7	-1	6730421	8986
ENSMUSG00000072115	protein_coding	Ang	ENSMUST00000069011	protein_coding	principal1	14	1	51096000	1094
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000238178	retained_intron		19	-1	5771352	606
ENSMUSG00000118026	antisense	Gm50335	ENSMUST00000236447	antisense		17	-1	34129410	650
ENSMUSG00000031871	protein_coding	Cdh5	ENSMUST00000209911	protein_coding		8	1	104111307	346
ENSMUSG00000005417	protein_coding	Mprip	ENSMUST00000116371	protein_coding	alternative2	11	1	59662507	8766
ENSMUSG00000094651	protein_coding	Gal3st2	ENSMUST00000187896	protein_coding		1	1	93861826	367
ENSMUSG00000024613	protein_coding	Tcof1	ENSMUST00000175934	protein_coding	alternative2	18	-1	60848929	4595
ENSMUSG00000092480	unprocessed_pseudogene	Gm20495	ENSMUST00000173902	unprocessed_pseudogene		17	-1	36182430	235
ENSMUSG00000117829	antisense	Gm50336	ENSMUST00000237050	antisense		17	1	34120568	405
ENSMUSG00000024941	protein_coding	Scyl1	ENSMUST00000237133	processed_transcript		19	-1	5771253	360
ENSMUSG00000030718	protein_coding	Ppme1	ENSMUST00000207092	processed_transcript		7	-1	100367588	754
ENSMUSG00000028864	protein_coding	Hgf	ENSMUST00000195957	retained_intron		5	1	16553495	1633
ENSMUSG00000027006	protein_coding	Dnajc10	ENSMUST00000125000	processed_transcript		2	1	80315466	1034
ENSMUSG00000047965	processed_pseudogene	Rpl9-ps7	ENSMUST00000140507	processed_pseudogene		2	1	70458982	579
ENSMUSG00000037649	protein_coding	H2-DMa	ENSMUST00000236938	processed_transcript		17	1	34119541	413
ENSMUSG00000030718	protein_coding	Ppme1	ENSMUST00000208168	retained_intron		7	-1	100371934	474
ENSMUSG00000037649	protein_coding	H2-DMa	ENSMUST00000237476	processed_transcript		17	1	34119588	742
ENSMUSG00000037649	protein_coding	H2-DMa	ENSMUST00000235910	processed_transcript		17	1	34122822	711
ENSMUSG00000005417	protein_coding	Mprip	ENSMUST00000133861	protein_coding		11	1	59727681	4153
ENSMUSG00000005417	protein_coding	Mprip	ENSMUST00000132620	protein_coding		11	1	59731550	3181
ENSMUSG00000024613	protein_coding	Tcof1	ENSMUST00000176630	protein_coding	principal3	18	-1	60848971	4529
ENSMUSG00000099137	antisense	Gm10603	ENSMUST00000183512	antisense		7	-1	100474841	2279
ENSMUSG00000099137	antisense	Gm10603	ENSMUST00000184420	antisense		7	-1	100467190	4520
ENSMUSG00000005417	protein_coding	Mprip	ENSMUST00000153531	processed_transcript		11	1	59740849	784
ENSMUSG00000005417	protein_coding	Mprip	ENSMUST00000156111	protein_coding		11	1	59760748	2236
ENSMUSG00000024613	protein_coding	Tcof1	ENSMUST00000163446	nonsense_mediated_decay		18	-1	60848959	4064
ENSMUSG00000006269	protein_coding	Atp6v1b1	ENSMUST00000006431	protein_coding	principal1	6	1	83742990	1999
ENSMUSG00000024613	protein_coding	Tcof1	ENSMUST00000177172	protein_coding		18	-1	60848918	3229
ENSMUSG00000026141	protein_coding	Col19a1	ENSMUST00000115244	protein_coding	principal1	1	-1	24587472	4266
ENSMUSG00000099137	antisense	Gm10603	ENSMUST00000184875	antisense		7	-1	100474846	508
ENSMUSG00000024613	protein_coding	Tcof1	ENSMUST00000176088	retained_intron		18	-1	60829027	865
ENSMUSG00000005417	protein_coding	Mprip	ENSMUST00000072031	protein_coding	principal4	11	1	59662495	8718
ENSMUSG00000102241	TEC	Gm37716	ENSMUST00000193553	TEC		7	1	100458460	947
ENSMUSG00000024613	protein_coding	Tcof1	ENSMUST00000177343	protein_coding		18	-1	60848446	582
ENSMUSG00000035258	protein_coding	Abi3bp	ENSMUST00000231337	retained_intron		16	1	56477878	2551
ENSMUSG00000006269	protein_coding	Atp6v1b1	ENSMUST00000205867	processed_transcript		6	1	83743049	653
ENSMUSG00000026141	protein_coding	Col19a1	ENSMUST00000051344	protein_coding		1	-1	24587411	3336
ENSMUSG00000006269	protein_coding	Atp6v1b1	ENSMUST00000206911	protein_coding		6	1	83743064	1591
ENSMUSG00000002265	protein_coding	Peg3	ENSMUST00000051209	protein_coding	principal2	7	-1	6730421	8694
ENSMUSG00000086536	antisense	Gm12264	ENSMUST00000123949	antisense		11	-1	59780321	500
ENSMUSG00000006269	protein_coding	Atp6v1b1	ENSMUST00000205763	protein_coding		6	1	83743094	647
ENSMUSG00000006269	protein_coding	Atp6v1b1	ENSMUST00000206652	retained_intron		6	1	83751833	645
ENSMUSG00000000103	protein_coding	Zfy2	ENSMUST00000187148	protein_coding	principal1	Y	-1	2150346	2846
ENSMUSG00000006269	protein_coding	Atp6v1b1	ENSMUST00000206052	retained_intron		6	1	83757139	935
ENSMUSG00000100776	unprocessed_pseudogene	Gm18254	ENSMUST00000185699	unprocessed_pseudogene		7	-1	35445237	1204
ENSMUSG00000002265	protein_coding	Peg3	ENSMUST00000150182	nonsense_mediated_decay		7	-1	6730419	3252
ENSMUSG00000029883	protein_coding	1700074P13Rik	ENSMUST00000122181	protein_coding	principal1	6	-1	40940497	1542
ENSMUSG00000002265	protein_coding	Peg3	ENSMUST00000143703	nonsense_mediated_decay		7	-1	6723215	733
ENSMUSG00000000103	protein_coding	Zfy2	ENSMUST00000115891	protein_coding	principal1	Y	-1	2170409	2816
ENSMUSG00000107828	processed_pseudogene	Gm18289	ENSMUST00000203356	processed_pseudogene		6	-1	4571716	2989
ENSMUSG00000002265	protein_coding	Peg3	ENSMUST00000155910	retained_intron		7	-1	6730431	4816
ENSMUSG00000099367	unprocessed_pseudogene	Gm29512	ENSMUST00000185544	unprocessed_pseudogene		Y	-1	50219783	315
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000192343	nonsense_mediated_decay		1	-1	156939599	4398
ENSMUSG00000021133	protein_coding	Susd6	ENSMUST00000220238	protein_coding	alternative2	12	1	80790510	2127
ENSMUSG00000024270	protein_coding	Slc39a6	ENSMUST00000070726	protein_coding	principal1	18	-1	24603817	3882
ENSMUSG00000029883	protein_coding	1700074P13Rik	ENSMUST00000031935	protein_coding	principal1	6	-1	40940557	1647
ENSMUSG00000027157	protein_coding	A26c3	ENSMUST00000142636	protein_coding		2	-1	111205199	1010
ENSMUSG00000024270	protein_coding	Slc39a6	ENSMUST00000154205	protein_coding		18	-1	24603515	1567
ENSMUSG00000021133	protein_coding	Susd6	ENSMUST00000068519	protein_coding	principal2	12	1	80790559	4977
ENSMUSG00000029883	protein_coding	1700074P13Rik	ENSMUST00000136499	protein_coding		6	-1	40929740	789
ENSMUSG00000024270	protein_coding	Slc39a6	ENSMUST00000152504	protein_coding		18	-1	24603293	337
ENSMUSG00000080894	unprocessed_pseudogene	Defa-ps15	ENSMUST00000118178	unprocessed_pseudogene		8	-1	19474732	477
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000171292	protein_coding	principal3	1	-1	156939387	3346
ENSMUSG00000021133	protein_coding	Susd6	ENSMUST00000219720	retained_intron		12	1	80868708	2662
ENSMUSG00000024270	protein_coding	Slc39a6	ENSMUST00000128106	retained_intron		18	-1	24599420	529
ENSMUSG00000081094	processed_pseudogene	Rpl19-ps11	ENSMUST00000122422	processed_pseudogene		8	1	19492936	591
ENSMUSG00000033931	protein_coding	Rbm34	ENSMUST00000045994	protein_coding	principal1	8	-1	126971071	3424
ENSMUSG00000118091	processed_pseudogene	Gm50407	ENSMUST00000236004	processed_pseudogene		18	1	40894684	929
ENSMUSG00000099614	unprocessed_pseudogene	Uba1y-ps2	ENSMUST00000190871	unprocessed_pseudogene		Y	1	2264257	2544
ENSMUSG00000118299	processed_pseudogene	Gm50408	ENSMUST00000235734	processed_pseudogene		18	-1	41477881	174
ENSMUSG00000037649	protein_coding	H2-DMa	ENSMUST00000042121	protein_coding	principal1	17	1	34122832	1658
ENSMUSG00000097513	TEC	Gm26696	ENSMUST00000181941	TEC		6	-1	4596651	2848
ENSMUSG00000099102	protein_coding	Gm11983	ENSMUST00000184257	translated_processed_pseudogene		11	-1	6837654	2029
ENSMUSG00000099102	protein_coding	Gm11983	ENSMUST00000184940	protein_coding	principal1	11	-1	6837125	318
ENSMUSG00000037649	protein_coding	H2-DMa	ENSMUST00000235408	processed_transcript		17	1	34122846	350
ENSMUSG00000037649	protein_coding	H2-DMa	ENSMUST00000237402	protein_coding		17	1	34135654	2005
ENSMUSG00000099973	unprocessed_pseudogene	Gm18796	ENSMUST00000190440	unprocessed_pseudogene		Y	-1	2314624	1767
ENSMUSG00000033931	protein_coding	Rbm34	ENSMUST00000212618	protein_coding		8	-1	126971070	1509
ENSMUSG00000099888	unprocessed_pseudogene	Gm29552	ENSMUST00000190548	unprocessed_pseudogene		Y	1	2325791	660
ENSMUSG00000100445	unprocessed_pseudogene	Gm29550	ENSMUST00000185543	unprocessed_pseudogene		Y	1	2328880	285
ENSMUSG00000033931	protein_coding	Rbm34	ENSMUST00000212583	retained_intron		8	-1	126971049	2165
ENSMUSG00000102072	unprocessed_pseudogene	Gm29551	ENSMUST00000190913	unprocessed_pseudogene		Y	-1	2337393	698
ENSMUSG00000037790	protein_coding	Defb7	ENSMUST00000047851	protein_coding	principal1	8	1	19495097	306
ENSMUSG00000086355	lincRNA	4933428C19Rik	ENSMUST00000146043	lincRNA		4	-1	40525548	818
ENSMUSG00000095595	protein_coding	Fam177a	ENSMUST00000177768	protein_coding	principal1	12	1	55124469	3922
ENSMUSG00000019837	protein_coding	Gtf3c6	ENSMUST00000217537	protein_coding	principal2	10	-1	40257671	2526
ENSMUSG00000101290	unprocessed_pseudogene	Gm8480	ENSMUST00000190350	unprocessed_pseudogene		Y	-1	2381361	698
ENSMUSG00000094719	protein_coding	Gm5108	ENSMUST00000202730	antisense		5	1	67941669	543
ENSMUSG00000037649	protein_coding	H2-DMa	ENSMUST00000173907	retained_intron		17	1	34137028	649
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000063199	protein_coding	principal3	1	-1	156939531	2947
ENSMUSG00000094719	protein_coding	Gm5108	ENSMUST00000201736	antisense		5	1	67941739	278
ENSMUSG00000082333	processed_pseudogene	Gm11984	ENSMUST00000118142	processed_pseudogene		11	-1	6862304	766
ENSMUSG00000034781	protein_coding	Gna11	ENSMUST00000043604	protein_coding	principal1	10	-1	81545190	3414
ENSMUSG00000094719	protein_coding	Gm5108	ENSMUST00000201798	antisense		5	1	67941739	330
ENSMUSG00000021216	protein_coding	Tubal3	ENSMUST00000223035	processed_transcript		13	1	3918274	1341
ENSMUSG00000094719	protein_coding	Gm5108	ENSMUST00000177891	protein_coding	principal1	5	1	67941669	543
ENSMUSG00000019837	protein_coding	Gtf3c6	ENSMUST00000019982	protein_coding	alternative2	10	-1	40257676	887
ENSMUSG00000113100	antisense	Gm48754	ENSMUST00000221683	antisense		13	1	17932386	3661
ENSMUSG00000034781	protein_coding	Gna11	ENSMUST00000146984	retained_intron		10	-1	81532015	1547
ENSMUSG00000037649	protein_coding	H2-DMa	ENSMUST00000236322	protein_coding	principal1	17	1	34135628	1108
ENSMUSG00000034781	protein_coding	Gna11	ENSMUST00000134354	retained_intron		10	-1	81535133	328
ENSMUSG00000019837	protein_coding	Gtf3c6	ENSMUST00000217457	processed_transcript		10	-1	40254329	488
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000191605	protein_coding	principal3	1	-1	156939608	2958
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000095585	protein_coding	principal1	13	-1	81633154	19338
ENSMUSG00000106880	antisense	4930425K10Rik	ENSMUST00000201190	antisense		5	-1	67943083	745
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000189208	retained_intron		1	-1	156813568	587
ENSMUSG00000108781	lincRNA	Gm44707	ENSMUST00000206293	lincRNA		7	-1	43857413	1216
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000201437	protein_coding		5	1	33721674	968
ENSMUSG00000108527	processed_pseudogene	Gm45173	ENSMUST00000206819	processed_pseudogene		7	1	43863883	305
ENSMUSG00000085175	antisense	Gm11423	ENSMUST00000152784	antisense		11	-1	82781042	686
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000224088	protein_coding		13	-1	81351626	1492
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000185198	protein_coding		1	-1	156939626	2229
ENSMUSG00000085175	antisense	Gm11423	ENSMUST00000136051	antisense		11	-1	82781042	655
ENSMUSG00000074805	antisense	Il1bos	ENSMUST00000156601	antisense		2	1	129369897	2425
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000189316	protein_coding		1	-1	156939567	2924
ENSMUSG00000019837	protein_coding	Gtf3c6	ENSMUST00000213628	protein_coding		10	-1	40257603	526
ENSMUSG00000114696	TEC	Gm47479	ENSMUST00000223997	TEC		13	-1	114120416	1976
ENSMUSG00000074805	antisense	Il1bos	ENSMUST00000143500	antisense		2	1	129369902	1396
ENSMUSG00000074805	antisense	Il1bos	ENSMUST00000168775	antisense		2	1	129373129	1949
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000237317	retained_intron		19	1	5740904	3857
ENSMUSG00000019837	protein_coding	Gtf3c6	ENSMUST00000216847	protein_coding		10	-1	40257562	452
ENSMUSG00000021216	protein_coding	Tubal3	ENSMUST00000021639	protein_coding	principal1	13	1	3924695	3096
ENSMUSG00000031592	protein_coding	Pcm1	ENSMUST00000045218	protein_coding	principal2	8	1	41239773	6624
ENSMUSG00000019837	protein_coding	Gtf3c6	ENSMUST00000217141	protein_coding		10	-1	40258108	496
ENSMUSG00000082614	processed_pseudogene	Gm12149	ENSMUST00000117511	processed_pseudogene		11	-1	43616329	654
ENSMUSG00000031592	protein_coding	Pcm1	ENSMUST00000211247	protein_coding	alternative2	8	1	41239778	6484
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000190648	protein_coding		1	-1	156939593	2498
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000188656	protein_coding		1	-1	156938818	2481
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000191503	retained_intron		1	-1	156830847	2350
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000185970	retained_intron		1	-1	156832691	672
ENSMUSG00000096715	IG_V_gene	Igkv3-4	ENSMUST00000103401	IG_V_gene	principal1	6	1	70671788	360
ENSMUSG00000027157	protein_coding	A26c3	ENSMUST00000028577	protein_coding	principal1	2	-1	111229602	1840
ENSMUSG00000114213	antisense	A430090L17Rik	ENSMUST00000225044	antisense		13	-1	114151592	3687
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000190762	protein_coding		1	-1	156939134	671
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000125698	nonsense_mediated_decay		13	-1	81444504	6590
ENSMUSG00000018809	protein_coding	Smyd4	ENSMUST00000044530	protein_coding	principal1	11	1	75348433	3517
ENSMUSG00000026594	protein_coding	Ralgps2	ENSMUST00000189648	protein_coding		1	-1	156938781	336
ENSMUSG00000084094	processed_pseudogene	Gm13961	ENSMUST00000119282	processed_pseudogene		2	1	111182635	4772
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000156631	processed_transcript		13	-1	81342836	815
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000172787	protein_coding		7	1	141130256	669
ENSMUSG00000081318	processed_pseudogene	Rpl36-ps1	ENSMUST00000119508	processed_pseudogene		11	1	116504536	303
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000109565	protein_coding		13	-1	81570640	7094
ENSMUSG00000086479	sense_intronic	Gm16014	ENSMUST00000123363	sense_intronic		5	1	43876030	544
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000172479	nonsense_mediated_decay		7	1	141130278	482
ENSMUSG00000018809	protein_coding	Smyd4	ENSMUST00000157055	retained_intron		11	1	75348495	1172
ENSMUSG00000018809	protein_coding	Smyd4	ENSMUST00000135774	processed_transcript		11	1	75399609	527
ENSMUSG00000116725	processed_transcript	Gm29686	ENSMUST00000232339	lincRNA		16	-1	51987287	1632
ENSMUSG00000018809	protein_coding	Smyd4	ENSMUST00000145888	processed_transcript		11	1	75387471	516
ENSMUSG00000116725	processed_transcript	Gm29686	ENSMUST00000231890	retained_intron		16	-1	51985785	625
ENSMUSG00000087281	antisense	Gm16015	ENSMUST00000154897	antisense		5	-1	43909885	390
ENSMUSG00000116725	processed_transcript	Gm29686	ENSMUST00000232050	lincRNA		16	-1	52005495	574
ENSMUSG00000040583	protein_coding	Cyp2b13	ENSMUST00000005669	protein_coding	principal1	7	1	26061497	1875
ENSMUSG00000101800	processed_pseudogene	Rnf170-ps	ENSMUST00000181188	processed_pseudogene		7	1	26072073	859
ENSMUSG00000101660	unprocessed_pseudogene	Gm18666	ENSMUST00000190039	unprocessed_pseudogene		1	1	93906244	958
ENSMUSG00000083662	processed_pseudogene	Gm12152	ENSMUST00000122465	processed_pseudogene		11	1	43670801	684
ENSMUSG00000108342	processed_pseudogene	Gm29920	ENSMUST00000206876	processed_pseudogene		7	-1	26100316	754
ENSMUSG00000008859	protein_coding	Rala	ENSMUST00000009003	protein_coding	principal1	13	-1	17944239	2688
ENSMUSG00000075304	protein_coding	Sp5	ENSMUST00000100043	protein_coding	principal1	2	1	70474923	2100
ENSMUSG00000008859	protein_coding	Rala	ENSMUST00000223147	protein_coding		13	-1	17943949	659
ENSMUSG00000108544	unprocessed_pseudogene	Cyp2b26-ps	ENSMUST00000206238	unprocessed_pseudogene		7	-1	26148592	1090
ENSMUSG00000114177	processed_pseudogene	Gm18362	ENSMUST00000221786	processed_pseudogene		13	1	17894855	529
ENSMUSG00000032846	protein_coding	Zswim6	ENSMUST00000225822	processed_transcript		13	-1	107890064	5311
ENSMUSG00000081720	processed_pseudogene	Gm12391	ENSMUST00000117626	processed_pseudogene		4	1	40678332	282
ENSMUSG00000032846	protein_coding	Zswim6	ENSMUST00000225197	processed_transcript		13	-1	107748282	3873
ENSMUSG00000032846	protein_coding	Zswim6	ENSMUST00000224719	retained_intron		13	-1	107734026	2126
ENSMUSG00000006457	protein_coding	Actn3	ENSMUST00000006626	protein_coding	principal1	19	-1	4877909	2887
ENSMUSG00000044950	protein_coding	Pwwp2a	ENSMUST00000109280	protein_coding	alternative2	11	1	43684145	2739
ENSMUSG00000044950	protein_coding	Pwwp2a	ENSMUST00000129229	processed_transcript		11	1	43705243	1506
ENSMUSG00000027398	protein_coding	Il1b	ENSMUST00000028881	protein_coding	principal1	2	-1	129371139	1356
ENSMUSG00000044950	protein_coding	Pwwp2a	ENSMUST00000130467	processed_transcript		11	1	43717656	797
ENSMUSG00000003378	protein_coding	Grik5	ENSMUST00000205328	nonsense_mediated_decay		7	-1	25072101	3597
ENSMUSG00000042348	protein_coding	Arl15	ENSMUST00000091201	protein_coding	principal1	13	1	113794505	3364
ENSMUSG00000006457	protein_coding	Actn3	ENSMUST00000138811	retained_intron		19	-1	4863558	982
ENSMUSG00000025427	protein_coding	Rnf165	ENSMUST00000026494	protein_coding	principal1	18	-1	77565136	7300
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000129725	retained_intron		13	-1	81533381	4037
ENSMUSG00000027398	protein_coding	Il1b	ENSMUST00000141979	processed_transcript		2	-1	129367351	379
ENSMUSG00000027398	protein_coding	Il1b	ENSMUST00000155994	retained_intron		2	-1	129371139	689
ENSMUSG00000042348	protein_coding	Arl15	ENSMUST00000224858	nonsense_mediated_decay		13	1	113794593	1966
ENSMUSG00000042348	protein_coding	Arl15	ENSMUST00000224068	protein_coding		13	1	113794622	1002
ENSMUSG00000099666	lincRNA	Gm29511	ENSMUST00000187580	lincRNA		Y	1	50258987	1497
ENSMUSG00000032846	protein_coding	Zswim6	ENSMUST00000105097	protein_coding	principal1	13	-1	107890064	5456
ENSMUSG00000025427	protein_coding	Rnf165	ENSMUST00000182024	protein_coding		18	-1	77565147	4309
ENSMUSG00000025427	protein_coding	Rnf165	ENSMUST00000182805	retained_intron		18	-1	77467148	408
ENSMUSG00000099666	lincRNA	Gm29511	ENSMUST00000189473	lincRNA		Y	1	50259439	621
ENSMUSG00000099666	lincRNA	Gm29511	ENSMUST00000191309	lincRNA		Y	1	50259439	437
ENSMUSG00000044950	protein_coding	Pwwp2a	ENSMUST00000094294	protein_coding		11	1	43682058	1814
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000156627	retained_intron		13	-1	81584856	9439
ENSMUSG00000025427	protein_coding	Rnf165	ENSMUST00000182153	processed_transcript		18	-1	77565115	667
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000146141	retained_intron		13	-1	81544637	2200
ENSMUSG00000118496	processed_pseudogene	AC131692.1	ENSMUST00000238867	processed_pseudogene		19	1	6055666	141
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000125663	retained_intron		13	-1	81559112	720
ENSMUSG00000025427	protein_coding	Rnf165	ENSMUST00000182348	processed_transcript		18	-1	77505118	675
ENSMUSG00000022201	protein_coding	Zfr	ENSMUST00000122941	protein_coding	principal1	15	1	12117831	4850
ENSMUSG00000044950	protein_coding	Pwwp2a	ENSMUST00000148461	processed_transcript		11	1	43682548	643
ENSMUSG00000025427	protein_coding	Rnf165	ENSMUST00000182294	retained_intron		18	-1	77564609	2517
ENSMUSG00000025427	protein_coding	Rnf165	ENSMUST00000182146	processed_transcript		18	-1	77565161	1427
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000126444	protein_coding		13	-1	81633139	3823
ENSMUSG00000117855	processed_pseudogene	Gm50197	ENSMUST00000236419	processed_pseudogene		18	1	77513440	194
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000128585	protein_coding		13	-1	81633139	2580
ENSMUSG00000044950	protein_coding	Pwwp2a	ENSMUST00000061070	protein_coding	principal2	11	1	43681998	3277
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000026568	protein_coding	principal1	7	1	141131286	3624
ENSMUSG00000022201	protein_coding	Zfr	ENSMUST00000228196	processed_transcript		15	1	12117851	812
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000146749	protein_coding		13	-1	81633141	1592
ENSMUSG00000022201	protein_coding	Zfr	ENSMUST00000128475	non_stop_decay		15	1	12117851	1115
ENSMUSG00000040478	protein_coding	Prdm13	ENSMUST00000144160	processed_transcript		4	-1	21685963	3245
ENSMUSG00000022856	protein_coding	Tmem41a	ENSMUST00000023562	protein_coding	principal1	16	-1	21947552	1360
ENSMUSG00000111665	lincRNA	A930033M14Rik	ENSMUST00000217206	lincRNA		10	1	40260934	400
ENSMUSG00000111213	processed_pseudogene	Gm47867	ENSMUST00000213723	processed_pseudogene		10	-1	40282053	673
ENSMUSG00000069170	protein_coding	Adgrv1	ENSMUST00000132045	retained_intron		13	-1	81584081	506
ENSMUSG00000022201	protein_coding	Zfr	ENSMUST00000134277	processed_transcript		15	1	12117859	633
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000174706	retained_intron		7	1	141131301	2119
ENSMUSG00000114773	processed_pseudogene	Gm48568	ENSMUST00000225882	processed_pseudogene		13	1	80992551	250
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000173721	processed_transcript		7	1	141131344	655
ENSMUSG00000114822	processed_pseudogene	Gm4813	ENSMUST00000225928	processed_pseudogene		13	-1	81029901	799
ENSMUSG00000022201	protein_coding	Zfr	ENSMUST00000124621	processed_transcript		15	1	12117866	513
ENSMUSG00000029084	protein_coding	Cd38	ENSMUST00000030964	protein_coding	principal1	5	1	43868553	3270
ENSMUSG00000097146	lincRNA	Gm4211	ENSMUST00000181103	lincRNA		13	-1	80963730	2220
ENSMUSG00000043889	processed_pseudogene	Gm8399	ENSMUST00000082300	processed_pseudogene		13	1	81064684	1117
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000174058	nonsense_mediated_decay		7	1	141131356	424
ENSMUSG00000022856	protein_coding	Tmem41a	ENSMUST00000232635	nonsense_mediated_decay		16	-1	21947531	1184
ENSMUSG00000110648	processed_pseudogene	Gm38574	ENSMUST00000211855	processed_pseudogene		8	-1	126982232	640
ENSMUSG00000022201	protein_coding	Zfr	ENSMUST00000155054	nonsense_mediated_decay		15	1	12159620	565
ENSMUSG00000040478	protein_coding	Prdm13	ENSMUST00000076206	protein_coding	alternative2	4	-1	21685783	2993
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000174612	processed_transcript		7	1	141132438	387
ENSMUSG00000029084	protein_coding	Cd38	ENSMUST00000196600	retained_intron		5	1	43868860	881
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000210026	retained_intron		7	1	141132450	835
ENSMUSG00000022201	protein_coding	Zfr	ENSMUST00000156752	protein_coding		15	1	12160541	897
ENSMUSG00000111543	unprocessed_pseudogene	Olfr1139-ps1	ENSMUST00000217634	unprocessed_pseudogene		2	1	87745000	168
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000173572	processed_transcript		7	1	141132553	564
ENSMUSG00000091297	protein_coding	Gm8439	ENSMUST00000238451	lincRNA		4	1	120588746	419
ENSMUSG00000068817	protein_coding	Olfr1140	ENSMUST00000217102	processed_transcript		2	1	87743752	750
ENSMUSG00000094478	IG_V_gene	Igkv3-3	ENSMUST00000103402	IG_V_gene	principal1	6	1	70686946	359
ENSMUSG00000068817	protein_coding	Olfr1140	ENSMUST00000214723	protein_coding	principal1	2	1	87743754	1421
ENSMUSG00000040478	protein_coding	Prdm13	ENSMUST00000139255	processed_transcript		4	-1	21685783	633
ENSMUSG00000040478	protein_coding	Prdm13	ENSMUST00000149516	processed_transcript		4	-1	21685781	681
ENSMUSG00000025495	protein_coding	Ptdss2	ENSMUST00000209928	protein_coding		7	1	141154623	408
ENSMUSG00000095351	IG_V_gene	Igkv3-2	ENSMUST00000103403	IG_V_gene	principal1	6	1	70698449	378
ENSMUSG00000091297	protein_coding	Gm8439	ENSMUST00000171482	protein_coding	principal1	4	1	120588745	420
ENSMUSG00000040478	protein_coding	Prdm13	ENSMUST00000139568	retained_intron		4	-1	21685845	1694
ENSMUSG00000040478	protein_coding	Prdm13	ENSMUST00000095141	protein_coding	principal2	4	-1	21685963	3173
ENSMUSG00000022201	protein_coding	Zfr	ENSMUST00000157034	nonsense_mediated_decay		15	1	12166159	939
ENSMUSG00000050224	protein_coding	Krtap13	ENSMUST00000053149	protein_coding	principal1	16	-1	88751635	892
ENSMUSG00000022201	protein_coding	Zfr	ENSMUST00000147492	retained_intron		15	1	12170276	666
ENSMUSG00000022201	protein_coding	Zfr	ENSMUST00000140787	processed_transcript		15	1	12179632	863
ENSMUSG00000068817	protein_coding	Olfr1140	ENSMUST00000217572	protein_coding	principal1	2	1	87745854	1327
ENSMUSG00000095682	IG_V_gene	Igkv3-1	ENSMUST00000103404	IG_V_gene	principal1	6	1	70703578	359
ENSMUSG00000100331	unprocessed_pseudogene	Gm20880	ENSMUST00000187276	unprocessed_pseudogene		Y	-1	50361155	696
ENSMUSG00000068078	protein_coding	2310034C09Rik	ENSMUST00000089111	protein_coding	principal1	16	1	88758847	946
ENSMUSG00000110492	processed_pseudogene	Gm5358	ENSMUST00000212814	processed_pseudogene		8	-1	127040700	353
ENSMUSG00000100390	unprocessed_pseudogene	Gm20881	ENSMUST00000186397	unprocessed_pseudogene		Y	-1	50435859	693
ENSMUSG00000097007	bidirectional_promoter_lncRNA	4930432B10Rik	ENSMUST00000181330	bidirectional_promoter_lncRNA		10	-1	11280998	1612
ENSMUSG00000036955	protein_coding	Kifbp	ENSMUST00000159704	protein_coding		10	-1	62578440	2622
ENSMUSG00000097007	bidirectional_promoter_lncRNA	4930432B10Rik	ENSMUST00000181688	bidirectional_promoter_lncRNA		10	-1	11281221	2085
ENSMUSG00000036955	protein_coding	Kifbp	ENSMUST00000162759	protein_coding		10	-1	62570415	804
ENSMUSG00000101263	unprocessed_pseudogene	Gm29121	ENSMUST00000187611	unprocessed_pseudogene		Y	-1	50465420	615
ENSMUSG00000006333	protein_coding	Rps9	ENSMUST00000006496	protein_coding	principal1	7	1	3703993	751
ENSMUSG00000025086	protein_coding	Trub1	ENSMUST00000026073	protein_coding	principal1	19	1	57452912	3789
ENSMUSG00000099986	unprocessed_pseudogene	Gm29120	ENSMUST00000186111	unprocessed_pseudogene		Y	-1	50502209	696
ENSMUSG00000051223	protein_coding	Bzw1	ENSMUST00000050552	protein_coding	principal2	1	1	58392898	3876
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000200169	protein_coding	principal1	14	-1	52257780	8509
ENSMUSG00000039615	protein_coding	Stub1	ENSMUST00000044911	protein_coding	principal1	17	-1	25833361	1803
ENSMUSG00000006333	protein_coding	Rps9	ENSMUST00000108623	protein_coding		7	1	3704038	1347
ENSMUSG00000051223	protein_coding	Bzw1	ENSMUST00000188898	protein_coding		1	1	58393124	863
ENSMUSG00000100118	lincRNA	Gm29117	ENSMUST00000190374	lincRNA		Y	1	50544517	1498
ENSMUSG00000040660	protein_coding	Cyp2b9	ENSMUST00000082214	protein_coding	principal1	7	1	26173411	1876
ENSMUSG00000006333	protein_coding	Rps9	ENSMUST00000128729	retained_intron		7	1	3704041	378
ENSMUSG00000039615	protein_coding	Stub1	ENSMUST00000237186	protein_coding		17	-1	25833404	1341
ENSMUSG00000025086	protein_coding	Trub1	ENSMUST00000026072	protein_coding		19	1	57452934	1564
ENSMUSG00000100118	lincRNA	Gm29117	ENSMUST00000185246	lincRNA		Y	1	50544969	438
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000226681	retained_intron		14	-1	52207180	3695
ENSMUSG00000036955	protein_coding	Kifbp	ENSMUST00000065887	protein_coding	principal1	10	-1	62578457	2472
ENSMUSG00000006333	protein_coding	Rps9	ENSMUST00000139818	protein_coding		7	1	3704042	333
ENSMUSG00000107299	processed_pseudogene	Gm43228	ENSMUST00000200735	processed_pseudogene		6	1	18792851	264
ENSMUSG00000092464	processed_pseudogene	Gm8902	ENSMUST00000174341	processed_pseudogene		7	1	26245899	1096
ENSMUSG00000039615	protein_coding	Stub1	ENSMUST00000236515	protein_coding		17	-1	25832941	1701
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000147827	retained_intron		14	-1	52206097	3543
ENSMUSG00000051223	protein_coding	Bzw1	ENSMUST00000188630	nonsense_mediated_decay		1	1	58393132	1615
ENSMUSG00000071568	processed_pseudogene	Gm5874	ENSMUST00000096101	processed_pseudogene		6	1	18824552	508
ENSMUSG00000006333	protein_coding	Rps9	ENSMUST00000146303	retained_intron		7	1	3704048	1185
ENSMUSG00000025086	protein_coding	Trub1	ENSMUST00000237166	retained_intron		19	1	57452939	2513
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000227897	protein_coding		14	-1	52202596	415
ENSMUSG00000006333	protein_coding	Rps9	ENSMUST00000108625	protein_coding	principal1	7	1	3704052	914
ENSMUSG00000019849	protein_coding	Prep	ENSMUST00000099858	protein_coding	principal1	10	1	45067203	10933
ENSMUSG00000025086	protein_coding	Trub1	ENSMUST00000238107	protein_coding		19	1	57452957	424
ENSMUSG00000051223	protein_coding	Bzw1	ENSMUST00000186949	protein_coding	alternative1	1	1	58393470	1492
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000147309	retained_intron		14	-1	52204627	3350
ENSMUSG00000006333	protein_coding	Rps9	ENSMUST00000108624	protein_coding		7	1	3704320	478
ENSMUSG00000075382	protein_coding	Olfr353	ENSMUST00000217215	protein_coding	principal1	2	-1	36892936	4173
ENSMUSG00000032649	protein_coding	Colgalt2	ENSMUST00000127586	nonsense_mediated_decay		1	1	152399830	3368
ENSMUSG00000075382	protein_coding	Olfr353	ENSMUST00000215925	protein_coding	principal1	2	-1	36892125	1615
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000149975	protein_coding		14	-1	52214492	3094
ENSMUSG00000112022	unprocessed_pseudogene	Gm2436	ENSMUST00000219562	unprocessed_pseudogene		12	-1	55154896	850
ENSMUSG00000113693	processed_pseudogene	Gm48340	ENSMUST00000221509	processed_pseudogene		12	1	55152450	405
ENSMUSG00000006333	protein_coding	Rps9	ENSMUST00000126562	protein_coding		7	1	3704325	896
ENSMUSG00000039615	protein_coding	Stub1	ENSMUST00000236565	retained_intron		17	-1	25832919	1408
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000134329	retained_intron		14	-1	52207556	2444
ENSMUSG00000075382	protein_coding	Olfr353	ENSMUST00000100149	protein_coding	principal1	2	-1	36890846	936
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000136528	retained_intron		14	-1	52207703	741
ENSMUSG00000006333	protein_coding	Rps9	ENSMUST00000146927	nonsense_mediated_decay		7	1	3704364	813
ENSMUSG00000039615	protein_coding	Stub1	ENSMUST00000235484	retained_intron		17	-1	25832919	1498
ENSMUSG00000032649	protein_coding	Colgalt2	ENSMUST00000044311	protein_coding	principal1	1	1	152399830	4093
ENSMUSG00000039615	protein_coding	Stub1	ENSMUST00000236361	protein_coding		17	-1	25832947	1320
ENSMUSG00000060950	protein_coding	Trmt61a	ENSMUST00000221089	protein_coding		12	1	111678105	601
ENSMUSG00000006333	protein_coding	Rps9	ENSMUST00000136858	retained_intron		7	1	3705616	525
ENSMUSG00000034210	protein_coding	Efcab14	ENSMUST00000106525	protein_coding	alternative2	4	1	115737744	2792
ENSMUSG00000080878	processed_pseudogene	Gm15618	ENSMUST00000121610	processed_pseudogene		1	-1	152407525	452
ENSMUSG00000039615	protein_coding	Stub1	ENSMUST00000235572	retained_intron		17	-1	25832953	1171
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000145404	retained_intron		14	-1	52213023	911
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000122823	retained_intron		14	-1	52214236	674
ENSMUSG00000100103	processed_pseudogene	Gm29553	ENSMUST00000189692	processed_pseudogene		Y	-1	2397544	279
ENSMUSG00000076607	IG_J_gene	Igkj4	ENSMUST00000103408	IG_J_gene	principal1	6	1	70723548	38
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000155614	retained_intron		14	-1	52215926	428
ENSMUSG00000076606	IG_J_gene	Igkj3	ENSMUST00000199487	IG_J_gene	principal1	6	1	70723223	38
ENSMUSG00000036955	protein_coding	Kifbp	ENSMUST00000162525	protein_coding		10	-1	62578416	2311
ENSMUSG00000076606	IG_J_gene	Igkj3	ENSMUST00000103407	processed_transcript		6	1	70723223	36
ENSMUSG00000036955	protein_coding	Kifbp	ENSMUST00000162648	nonsense_mediated_decay		10	-1	62566121	1699
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000149694	processed_transcript		14	-1	52227597	479
ENSMUSG00000076605	IG_J_gene	Igkj2	ENSMUST00000198234	IG_J_gene	principal1	6	1	70722916	39
ENSMUSG00000034210	protein_coding	Efcab14	ENSMUST00000136593	processed_transcript		4	1	115737779	3319
ENSMUSG00000044988	protein_coding	Ucn3	ENSMUST00000058610	protein_coding	principal1	13	-1	3945349	1478
ENSMUSG00000036955	protein_coding	Kifbp	ENSMUST00000208223	processed_transcript		10	-1	62568418	784
ENSMUSG00000036955	protein_coding	Kifbp	ENSMUST00000162263	retained_intron		10	-1	62563578	628
ENSMUSG00000020836	protein_coding	Coro6	ENSMUST00000102493	protein_coding	alternative1	11	1	77462411	2804
ENSMUSG00000047648	protein_coding	Fbxo30	ENSMUST00000129456	protein_coding	principal1	10	1	11281330	5060
ENSMUSG00000034210	protein_coding	Efcab14	ENSMUST00000106522	protein_coding		4	1	115737779	2636
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000226625	retained_intron		14	-1	52226661	488
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000081496	protein_coding	principal1	19	1	5740904	5190
ENSMUSG00000102120	unprocessed_pseudogene	Gm28630	ENSMUST00000187806	unprocessed_pseudogene		Y	1	2552500	498
ENSMUSG00000060950	protein_coding	Trmt61a	ENSMUST00000084947	protein_coding	principal1	12	1	111678105	2433
ENSMUSG00000028851	protein_coding	Nudc	ENSMUST00000030665	protein_coding	principal1	4	-1	133545996	1316
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000226307	protein_coding		14	-1	52244509	360
ENSMUSG00000034210	protein_coding	Efcab14	ENSMUST00000132306	processed_transcript		4	1	115737780	2368
ENSMUSG00000036955	protein_coding	Kifbp	ENSMUST00000160228	retained_intron		10	-1	62570403	440
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000199135	retained_intron		14	-1	52257723	3329
ENSMUSG00000020836	protein_coding	Coro6	ENSMUST00000130255	protein_coding		11	1	77462645	281
ENSMUSG00000003378	protein_coding	Grik5	ENSMUST00000003468	protein_coding	principal1	7	-1	25072292	3763
ENSMUSG00000028851	protein_coding	Nudc	ENSMUST00000141860	processed_transcript		4	-1	133533437	204
ENSMUSG00000053754	protein_coding	Chd8	ENSMUST00000089752	protein_coding	principal1	14	-1	52237572	8190
ENSMUSG00000036955	protein_coding	Kifbp	ENSMUST00000159722	retained_intron		10	-1	62578394	959
ENSMUSG00000105203	antisense	4933428P19Rik	ENSMUST00000199616	antisense		10	1	62577694	1376
ENSMUSG00000003378	protein_coding	Grik5	ENSMUST00000206134	nonsense_mediated_decay		7	-1	25072346	4061
ENSMUSG00000060950	protein_coding	Trmt61a	ENSMUST00000222737	protein_coding		12	1	111678116	491
ENSMUSG00000028851	protein_coding	Nudc	ENSMUST00000148612	processed_transcript		4	-1	133535927	641
ENSMUSG00000029311	protein_coding	Hsd17b11	ENSMUST00000031251	protein_coding	principal2	5	-1	104021919	1825
ENSMUSG00000098177	processed_pseudogene	Gm4823	ENSMUST00000181990	processed_pseudogene		15	-1	3746875	984
ENSMUSG00000099394	processed_pseudogene	Gm9142	ENSMUST00000187161	processed_pseudogene		7	1	32358928	955
ENSMUSG00000047648	protein_coding	Fbxo30	ENSMUST00000070300	protein_coding	principal1	10	1	11281587	2492
ENSMUSG00000115843	processed_pseudogene	Gm17873	ENSMUST00000227989	processed_pseudogene		15	1	3929985	576
ENSMUSG00000060950	protein_coding	Trmt61a	ENSMUST00000168338	protein_coding	principal1	12	1	111678105	2131
ENSMUSG00000003378	protein_coding	Grik5	ENSMUST00000206132	retained_intron		7	-1	25059431	880
ENSMUSG00000076605	IG_J_gene	Igkj2	ENSMUST00000103406	processed_transcript		6	1	70722916	43
ENSMUSG00000029311	protein_coding	Hsd17b11	ENSMUST00000119025	protein_coding	alternative2	5	-1	104021838	2234
ENSMUSG00000003378	protein_coding	Grik5	ENSMUST00000205661	retained_intron		7	-1	25065193	818
ENSMUSG00000107728	lincRNA	Gm38910	ENSMUST00000204630	lincRNA		6	-1	134607681	2448
ENSMUSG00000076608	IG_J_gene	Igkj5	ENSMUST00000199459	IG_J_gene	principal1	6	1	70723886	38
ENSMUSG00000003378	protein_coding	Grik5	ENSMUST00000206095	retained_intron		7	-1	25060994	600
ENSMUSG00000112991	lincRNA	Gm36635	ENSMUST00000221152	lincRNA		12	1	111703082	1332
ENSMUSG00000034210	protein_coding	Efcab14	ENSMUST00000074425	protein_coding	principal2	4	1	115738073	4300
ENSMUSG00000003378	protein_coding	Grik5	ENSMUST00000205993	processed_transcript		7	-1	25072310	455
ENSMUSG00000068219	protein_coding	Ssxb10	ENSMUST00000103003	protein_coding	principal1	X	1	8327424	879
ENSMUSG00000082650	processed_pseudogene	Gm15358	ENSMUST00000119249	processed_pseudogene		8	-1	19514397	520
ENSMUSG00000037295	protein_coding	Ldlrap1	ENSMUST00000037828	protein_coding	principal1	4	-1	134768024	6549
ENSMUSG00000117677	processed_pseudogene	Gm50409	ENSMUST00000235955	processed_pseudogene		18	-1	41586091	848
ENSMUSG00000086187	lincRNA	Gm12860	ENSMUST00000148457	lincRNA		4	1	120615840	957
ENSMUSG00000110389	lincRNA	Gm45579	ENSMUST00000209367	lincRNA		4	-1	120648137	887
ENSMUSG00000020836	protein_coding	Coro6	ENSMUST00000021190	protein_coding	principal5	11	1	77463911	1418
ENSMUSG00000037295	protein_coding	Ldlrap1	ENSMUST00000148479	retained_intron		4	-1	134750107	939
ENSMUSG00000034210	protein_coding	Efcab14	ENSMUST00000106524	protein_coding	alternative2	4	1	115738566	1356
ENSMUSG00000114627	lincRNA	B230220B15Rik	ENSMUST00000224913	lincRNA		13	1	107996285	651
ENSMUSG00000020836	protein_coding	Coro6	ENSMUST00000079770	protein_coding		11	1	77463911	1298
ENSMUSG00000070803	protein_coding	Cited4	ENSMUST00000094814	protein_coding	principal1	4	1	120666572	1249
ENSMUSG00000114627	lincRNA	B230220B15Rik	ENSMUST00000224800	lincRNA		13	1	107999101	2511
ENSMUSG00000037295	protein_coding	Ldlrap1	ENSMUST00000140678	retained_intron		4	-1	134750850	605
ENSMUSG00000034210	protein_coding	Efcab14	ENSMUST00000141927	processed_transcript		4	1	115766468	358
ENSMUSG00000076608	IG_J_gene	Igkj5	ENSMUST00000103409	processed_transcript		6	1	70723886	42
ENSMUSG00000057967	protein_coding	Fgf18	ENSMUST00000109363	protein_coding		11	-1	33146795	991
ENSMUSG00000049792	protein_coding	Bag5	ENSMUST00000054636	protein_coding	principal1	12	-1	111713257	2139
ENSMUSG00000006304	protein_coding	Arpc2	ENSMUST00000185733	protein_coding		1	1	74236084	310
ENSMUSG00000027006	protein_coding	Dnajc10	ENSMUST00000028392	protein_coding	principal1	2	1	80315466	4042
ENSMUSG00000113648	processed_pseudogene	Gm48806	ENSMUST00000221879	processed_pseudogene		12	1	87371992	324
ENSMUSG00000049792	protein_coding	Bag5	ENSMUST00000160576	protein_coding	principal1	12	-1	111712927	1852
ENSMUSG00000068184	protein_coding	Ndufaf2	ENSMUST00000225702	nonsense_mediated_decay		13	-1	108158623	2404
ENSMUSG00000027006	protein_coding	Dnajc10	ENSMUST00000133536	processed_transcript		2	1	80331293	839
ENSMUSG00000027006	protein_coding	Dnajc10	ENSMUST00000153093	processed_transcript		2	1	80333553	562
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000235898	retained_intron		19	1	5742357	650
ENSMUSG00000006641	protein_coding	Slc5a6	ENSMUST00000202520	protein_coding	principal1	5	-1	31048002	3248
ENSMUSG00000049792	protein_coding	Bag5	ENSMUST00000160825	protein_coding		12	-1	111712953	445
ENSMUSG00000027006	protein_coding	Dnajc10	ENSMUST00000154912	processed_transcript		2	1	80347654	576
ENSMUSG00000049792	protein_coding	Bag5	ENSMUST00000162953	protein_coding		12	-1	111712953	447
ENSMUSG00000082160	processed_pseudogene	Gm11578	ENSMUST00000118530	processed_pseudogene		1	-1	60592709	459
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000236258	retained_intron		19	1	5742459	2673
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000237280	retained_intron		19	1	5743903	5729
ENSMUSG00000103215	TEC	Gm38388	ENSMUST00000195569	TEC		1	-1	60596236	1430
ENSMUSG00000020836	protein_coding	Coro6	ENSMUST00000108391	protein_coding	alternative1	11	1	77463836	1593
ENSMUSG00000057967	protein_coding	Fgf18	ENSMUST00000020507	protein_coding	principal1	11	-1	33147400	1086
ENSMUSG00000020836	protein_coding	Coro6	ENSMUST00000052515	protein_coding		11	1	77463836	1476
ENSMUSG00000023852	protein_coding	Chd1	ENSMUST00000024627	protein_coding	principal1	17	1	15704967	7916
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000236617	protein_coding		19	1	5745733	356
ENSMUSG00000083833	processed_pseudogene	Gm13841	ENSMUST00000118829	processed_pseudogene		5	-1	115802159	483
ENSMUSG00000037197	protein_coding	Rbm17	ENSMUST00000040314	protein_coding	principal1	2	-1	11603262	1599
ENSMUSG00000084151	processed_pseudogene	Gm11577	ENSMUST00000118030	processed_pseudogene		1	1	60700872	737
ENSMUSG00000083218	processed_pseudogene	Gm16425	ENSMUST00000118143	processed_pseudogene		8	1	19535454	3130
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000237128	retained_intron		19	1	5750651	498
ENSMUSG00000023852	protein_coding	Chd1	ENSMUST00000173311	protein_coding		17	1	15704974	4211
ENSMUSG00000037197	protein_coding	Rbm17	ENSMUST00000125808	retained_intron		2	-1	11585990	447
ENSMUSG00000063902	processed_pseudogene	Gm7964	ENSMUST00000051522	processed_pseudogene		7	1	83755904	1378
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000235336	retained_intron		19	1	5755062	2099
ENSMUSG00000101629	antisense	Gm29588	ENSMUST00000185738	antisense		6	1	40950224	298
ENSMUSG00000037197	protein_coding	Rbm17	ENSMUST00000150369	retained_intron		2	-1	11587168	663
ENSMUSG00000101188	processed_pseudogene	Eif4a-ps4	ENSMUST00000122226	processed_pseudogene		1	1	60703932	1218
ENSMUSG00000026848	protein_coding	Tor1b	ENSMUST00000028199	protein_coding	principal1	2	1	30952959	3039
ENSMUSG00000037197	protein_coding	Rbm17	ENSMUST00000131036	retained_intron		2	-1	11588981	458
ENSMUSG00000076604	IG_J_gene	Igkj1	ENSMUST00000103405	IG_J_gene	principal1	6	1	70722562	38
ENSMUSG00000037197	protein_coding	Rbm17	ENSMUST00000195047	retained_intron		2	-1	11590858	347
ENSMUSG00000037197	protein_coding	Rbm17	ENSMUST00000156469	protein_coding		2	-1	11604153	517
ENSMUSG00000025736	protein_coding	Jmjd8	ENSMUST00000133595	protein_coding	alternative2	17	1	25828867	2268
ENSMUSG00000035064	protein_coding	Eef2k	ENSMUST00000047875	protein_coding	principal1	7	1	120842831	6580
ENSMUSG00000085921	antisense	Gm13752	ENSMUST00000138195	antisense		2	1	80394897	491
ENSMUSG00000061759	protein_coding	Armt1	ENSMUST00000095893	protein_coding	principal1	10	1	4432467	2429
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000236130	protein_coding		19	1	5755616	1387
ENSMUSG00000106874	lincRNA	Gm20186	ENSMUST00000201775	lincRNA		6	-1	18846763	737
ENSMUSG00000025736	protein_coding	Jmjd8	ENSMUST00000152434	nonsense_mediated_decay		17	1	25829052	1951
ENSMUSG00000106874	lincRNA	Gm20186	ENSMUST00000202542	lincRNA		6	-1	18848207	741
ENSMUSG00000076609	IG_C_gene	Igkc	ENSMUST00000103410	IG_C_gene	principal1	6	1	70726435	532
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000236529	nonsense_mediated_decay		19	1	5756794	580
ENSMUSG00000106874	lincRNA	Gm20186	ENSMUST00000202148	lincRNA		6	-1	18846764	470
ENSMUSG00000061759	protein_coding	Armt1	ENSMUST00000118544	protein_coding		10	1	4432513	5044
ENSMUSG00000079705	protein_coding	Ssxb1	ENSMUST00000037297	protein_coding	principal1	X	1	8413305	875
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000237327	retained_intron		19	1	5756970	704
ENSMUSG00000035064	protein_coding	Eef2k	ENSMUST00000143279	protein_coding		7	1	120843567	504
ENSMUSG00000063252	unprocessed_pseudogene	Gm4744	ENSMUST00000073642	unprocessed_pseudogene		6	-1	40954353	743
ENSMUSG00000068184	protein_coding	Ndufaf2	ENSMUST00000163558	protein_coding	principal1	13	-1	108158623	678
ENSMUSG00000024940	protein_coding	Ltbp3	ENSMUST00000237180	retained_intron		19	1	5757532	156
ENSMUSG00000105646	lincRNA	Gm30211	ENSMUST00000197227	lincRNA		6	1	70719074	3078
ENSMUSG00000022551	protein_coding	Cyc1	ENSMUST00000023210	protein_coding	principal1	15	1	76343523	1520
ENSMUSG00000117708	processed_pseudogene	Gm18530	ENSMUST00000237940	processed_pseudogene		18	1	41639794	1024
ENSMUSG00000061759	protein_coding	Armt1	ENSMUST00000152294	nonsense_mediated_decay		10	1	4432640	828
ENSMUSG00000023852	protein_coding	Chd1	ENSMUST00000173159	processed_transcript		17	1	15705018	1372
ENSMUSG00000081920	processed_pseudogene	Selenot-ps	ENSMUST00000119098	processed_pseudogene		8	1	19579940	593
ENSMUSG00000100881	unprocessed_pseudogene	Gm21824	ENSMUST00000186810	unprocessed_pseudogene		Y	-1	84629395	696
ENSMUSG00000023852	protein_coding	Chd1	ENSMUST00000174461	protein_coding		17	1	15738535	1812
ENSMUSG00000068184	protein_coding	Ndufaf2	ENSMUST00000223734	protein_coding		13	-1	108158591	556
ENSMUSG00000033036	protein_coding	Gm7879	ENSMUST00000122204	protein_coding	principal1	5	1	43913144	774
ENSMUSG00000035064	protein_coding	Eef2k	ENSMUST00000106489	protein_coding	principal1	7	1	120843600	3047
ENSMUSG00000068184	protein_coding	Ndufaf2	ENSMUST00000225830	protein_coding		13	-1	108158484	250
ENSMUSG00000023852	protein_coding	Chd1	ENSMUST00000173040	nonsense_mediated_decay		17	1	15756765	660
ENSMUSG00000110463	lincRNA	Gm35998	ENSMUST00000212862	lincRNA		8	-1	19665322	838
ENSMUSG00000061759	protein_coding	Armt1	ENSMUST00000143037	processed_transcript		10	1	4432627	2295
ENSMUSG00000039195	protein_coding	1110008P14Rik	ENSMUST00000146423	protein_coding		2	-1	32381862	2618
ENSMUSG00000058355	protein_coding	Abce1	ENSMUST00000080536	protein_coding	principal1	8	-1	79711740	3793
ENSMUSG00000033036	protein_coding	Gm7879	ENSMUST00000200338	protein_coding		5	1	43913147	635
ENSMUSG00000117745	lincRNA	Gm50410	ENSMUST00000235677	lincRNA		18	-1	41874834	999
ENSMUSG00000061759	protein_coding	Armt1	ENSMUST00000131636	processed_transcript		10	1	4434581	1158
ENSMUSG00000035064	protein_coding	Eef2k	ENSMUST00000143322	protein_coding		7	1	120851189	667
ENSMUSG00000022551	protein_coding	Cyc1	ENSMUST00000229710	retained_intron		15	1	76343533	1791
ENSMUSG00000087153	unprocessed_pseudogene	Gm6483	ENSMUST00000155660	unprocessed_pseudogene		8	1	19682449	862
ENSMUSG00000061759	protein_coding	Armt1	ENSMUST00000117489	protein_coding		10	1	4432620	680
ENSMUSG00000022551	protein_coding	Cyc1	ENSMUST00000229013	nonsense_mediated_decay		15	1	76343561	737
ENSMUSG00000110531	processed_pseudogene	Gm7760	ENSMUST00000212265	processed_pseudogene		8	-1	19711705	578
ENSMUSG00000061759	protein_coding	Armt1	ENSMUST00000134484	retained_intron		10	1	4432635	424
ENSMUSG00000113667	processed_pseudogene	Gm47853	ENSMUST00000221030	processed_pseudogene		13	1	4023169	2659
ENSMUSG00000102122	protein_coding	Gm20883	ENSMUST00000185245	protein_coding	principal1	Y	1	50608251	922
ENSMUSG00000022551	protein_coding	Cyc1	ENSMUST00000231045	protein_coding		15	1	76343567	716
ENSMUSG00000099445	unprocessed_pseudogene	Gm28629	ENSMUST00000187309	unprocessed_pseudogene		Y	1	2597674	263
ENSMUSG00000025736	protein_coding	Jmjd8	ENSMUST00000123692	retained_intron		17	1	25829064	622
ENSMUSG00000022551	protein_coding	Cyc1	ENSMUST00000230706	protein_coding		15	1	76343799	360
ENSMUSG00000094881	protein_coding	H2al2c	ENSMUST00000163651	protein_coding	principal1	Y	1	2599099	336
ENSMUSG00000026848	protein_coding	Tor1b	ENSMUST00000133544	retained_intron		2	1	30952979	4775
ENSMUSG00000068218	protein_coding	Ssxb9	ENSMUST00000115584	protein_coding	principal1	X	1	8366978	879
ENSMUSG00000036352	protein_coding	Ubac1	ENSMUST00000036509	protein_coding	principal2	2	-1	26021747	1852
ENSMUSG00000022551	protein_coding	Cyc1	ENSMUST00000229946	retained_intron		15	1	76343845	771
ENSMUSG00000022818	protein_coding	Cyp2ab1	ENSMUST00000182508	protein_coding		16	-1	20325404	2735
ENSMUSG00000058355	protein_coding	Abce1	ENSMUST00000211509	retained_intron		8	-1	79711670	3030
ENSMUSG00000022551	protein_coding	Cyc1	ENSMUST00000229292	processed_transcript		15	1	76344476	563
ENSMUSG00000099748	unprocessed_pseudogene	Uba1y-ps1	ENSMUST00000188314	unprocessed_pseudogene		Y	-1	2647300	1708
ENSMUSG00000026848	protein_coding	Tor1b	ENSMUST00000135507	nonsense_mediated_decay		2	1	30952991	732
ENSMUSG00000058355	protein_coding	Abce1	ENSMUST00000209354	retained_intron		8	-1	79699413	814
ENSMUSG00000022818	protein_coding	Cyp2ab1	ENSMUST00000182736	processed_transcript		16	-1	20314210	829
ENSMUSG00000069036	protein_coding	Sry	ENSMUST00000091178	protein_coding	principal1	Y	-1	2663658	1188
ENSMUSG00000006641	protein_coding	Slc5a6	ENSMUST00000114668	protein_coding	principal1	5	-1	31048562	3436
ENSMUSG00000058355	protein_coding	Abce1	ENSMUST00000213842	retained_intron		8	-1	79711650	589
ENSMUSG00000036352	protein_coding	Ubac1	ENSMUST00000123275	processed_transcript		2	-1	26007920	814
ENSMUSG00000098101	processed_pseudogene	Gm27006	ENSMUST00000182218	processed_pseudogene		8	1	79705597	943
ENSMUSG00000026848	protein_coding	Tor1b	ENSMUST00000155213	retained_intron		2	1	30953172	1324
ENSMUSG00000061808	protein_coding	Ttr	ENSMUST00000075312	protein_coding	principal1	18	1	20665280	1186
ENSMUSG00000022818	protein_coding	Cyp2ab1	ENSMUST00000182741	protein_coding	principal1	16	-1	20316750	1497
ENSMUSG00000025736	protein_coding	Jmjd8	ENSMUST00000123582	retained_intron		17	1	25829120	831
ENSMUSG00000071180	protein_coding	Smim15	ENSMUST00000095458	protein_coding	principal1	13	1	108044446	1918
ENSMUSG00000039195	protein_coding	1110008P14Rik	ENSMUST00000048792	protein_coding	principal1	2	-1	32381938	680
ENSMUSG00000036352	protein_coding	Ubac1	ENSMUST00000150608	processed_transcript		2	-1	26021602	658
ENSMUSG00000025736	protein_coding	Jmjd8	ENSMUST00000144589	retained_intron		17	1	25829121	865
ENSMUSG00000022818	protein_coding	Cyp2ab1	ENSMUST00000182669	retained_intron		16	-1	20316051	264
ENSMUSG00000071180	protein_coding	Smim15	ENSMUST00000223808	protein_coding	principal1	13	1	108044450	808
ENSMUSG00000006641	protein_coding	Slc5a6	ENSMUST00000080431	protein_coding	principal1	5	-1	31048924	3218
ENSMUSG00000026848	protein_coding	Tor1b	ENSMUST00000156711	nonsense_mediated_decay		2	1	30953187	2809
ENSMUSG00000025736	protein_coding	Jmjd8	ENSMUST00000143296	retained_intron		17	1	25829297	754
ENSMUSG00000026848	protein_coding	Tor1b	ENSMUST00000132514	nonsense_mediated_decay		2	1	30953752	507
ENSMUSG00000081591	processed_pseudogene	Gm13440	ENSMUST00000121665	processed_pseudogene		2	1	36909095	496
ENSMUSG00000043165	protein_coding	Lor	ENSMUST00000058150	protein_coding	principal1	3	-1	92083142	1779
ENSMUSG00000085595	antisense	Gm16090	ENSMUST00000130296	antisense		18	-1	20665260	1704
ENSMUSG00000022818	protein_coding	Cyp2ab1	ENSMUST00000023513	protein_coding		16	-1	20323065	2720
ENSMUSG00000036352	protein_coding	Ubac1	ENSMUST00000146898	processed_transcript		2	-1	26021566	426
ENSMUSG00000025736	protein_coding	Jmjd8	ENSMUST00000123560	retained_intron		17	1	25829839	622
ENSMUSG00000071180	protein_coding	Smim15	ENSMUST00000226042	protein_coding	principal1	13	1	108044486	1092
ENSMUSG00000036352	protein_coding	Ubac1	ENSMUST00000136750	protein_coding	alternative2	2	-1	26021532	778
ENSMUSG00000053178	protein_coding	Mterf1b	ENSMUST00000177258	protein_coding	principal1	5	1	4192367	1368
ENSMUSG00000055088	protein_coding	Olfr354	ENSMUST00000217479	protein_coding	principal1	2	1	36905680	9539
ENSMUSG00000026848	protein_coding	Tor1b	ENSMUST00000195010	processed_transcript		2	1	30955253	892
ENSMUSG00000006641	protein_coding	Slc5a6	ENSMUST00000202556	protein_coding	principal1	5	-1	31048009	3078
ENSMUSG00000035064	protein_coding	Eef2k	ENSMUST00000106488	protein_coding	principal1	7	1	120851189	2537
ENSMUSG00000100657	processed_pseudogene	Gm28862	ENSMUST00000188246	processed_pseudogene		7	-1	32388406	163
ENSMUSG00000055088	protein_coding	Olfr354	ENSMUST00000218102	processed_transcript		2	1	36905680	8237
ENSMUSG00000104981	lincRNA	Gm43736	ENSMUST00000196377	lincRNA		3	1	92097351	2281
ENSMUSG00000071180	protein_coding	Smim15	ENSMUST00000225972	protein_coding	principal1	13	1	108044489	2097
ENSMUSG00000094808	protein_coding	1810009J06Rik	ENSMUST00000076638	protein_coding	principal1	6	1	40964754	882
ENSMUSG00000025736	protein_coding	Jmjd8	ENSMUST00000026832	protein_coding	principal2	17	1	25829043	2091
ENSMUSG00000006641	protein_coding	Slc5a6	ENSMUST00000201017	retained_intron		5	-1	31037994	568
ENSMUSG00000035064	protein_coding	Eef2k	ENSMUST00000125828	retained_intron		7	1	120876220	334
ENSMUSG00000055088	protein_coding	Olfr354	ENSMUST00000068475	protein_coding	principal1	2	1	36906911	1084
ENSMUSG00000035064	protein_coding	Eef2k	ENSMUST00000146482	protein_coding		7	1	120887924	672
ENSMUSG00000006641	protein_coding	Slc5a6	ENSMUST00000202984	protein_coding		5	-1	31042605	586
ENSMUSG00000036352	protein_coding	Ubac1	ENSMUST00000134990	processed_transcript		2	-1	26017478	405
ENSMUSG00000035064	protein_coding	Eef2k	ENSMUST00000128813	retained_intron		7	1	120891855	800
ENSMUSG00000108335	processed_pseudogene	Gm45215	ENSMUST00000206407	processed_pseudogene		6	1	91594758	395
ENSMUSG00000036352	protein_coding	Ubac1	ENSMUST00000146363	protein_coding		2	-1	26016312	551
ENSMUSG00000071180	protein_coding	Smim15	ENSMUST00000224361	protein_coding	principal1	13	1	108046411	830
ENSMUSG00000074966	protein_coding	Olfr1275	ENSMUST00000217539	protein_coding	principal1	2	-1	111235035	1661
ENSMUSG00000035064	protein_coding	Eef2k	ENSMUST00000106487	protein_coding		7	1	120891985	485
ENSMUSG00000005312	protein_coding	Ubqln1	ENSMUST00000058735	protein_coding	alternative2	13	-1	58215653	3686
ENSMUSG00000075380	protein_coding	Olfr355	ENSMUST00000213574	protein_coding	principal1	2	-1	36928897	3610
ENSMUSG00000106143	antisense	Gm43735	ENSMUST00000198245	antisense		3	1	92113192	809
ENSMUSG00000036352	protein_coding	Ubac1	ENSMUST00000148725	processed_transcript		2	-1	26010953	610
ENSMUSG00000071180	protein_coding	Smim15	ENSMUST00000224390	protein_coding	principal1	13	1	108046458	645
ENSMUSG00000074966	protein_coding	Olfr1275	ENSMUST00000216421	protein_coding	principal1	2	-1	111235286	2418
ENSMUSG00000075380	protein_coding	Olfr355	ENSMUST00000100147	protein_coding	principal1	2	-1	36928112	933
ENSMUSG00000036352	protein_coding	Ubac1	ENSMUST00000154336	processed_transcript		2	-1	26009223	786
ENSMUSG00000107932	TEC	Gm44432	ENSMUST00000203342	TEC		6	1	4610234	938
ENSMUSG00000074966	protein_coding	Olfr1275	ENSMUST00000099620	protein_coding	principal1	2	-1	111231837	1020
ENSMUSG00000006641	protein_coding	Slc5a6	ENSMUST00000200816	protein_coding		5	-1	31048079	728
ENSMUSG00000056270	protein_coding	Prr9	ENSMUST00000070284	protein_coding	principal1	3	-1	92123947	1183
ENSMUSG00000109546	processed_pseudogene	Gm18468	ENSMUST00000207321	processed_pseudogene		7	1	22723861	369
ENSMUSG00000108308	lincRNA	Gm45218	ENSMUST00000205533	lincRNA		6	1	91599232	1678
ENSMUSG00000085110	antisense	Gm13920	ENSMUST00000146134	antisense		2	1	102057587	1663
ENSMUSG00000096525	protein_coding	Gm2663	ENSMUST00000166306	protein_coding	principal1	6	-1	40999479	862
ENSMUSG00000026094	protein_coding	Stk17b	ENSMUST00000027263	protein_coding	principal1	1	-1	53785224	3293
ENSMUSG00000095619	protein_coding	Vmn1r157	ENSMUST00000178215	protein_coding	principal1	7	1	22761697	894
ENSMUSG00000081618	transcribed_processed_pseudogene	5033423K11Rik	ENSMUST00000202802	processed_transcript		5	-1	33142110	1162
ENSMUSG00000081618	transcribed_processed_pseudogene	5033423K11Rik	ENSMUST00000117311	transcribed_processed_pseudogene		5	-1	33142422	787
ENSMUSG00000104791	sense_overlapping	4930511M18Rik	ENSMUST00000197811	sense_overlapping		3	-1	92142736	679
ENSMUSG00000005312	protein_coding	Ubqln1	ENSMUST00000076454	protein_coding	principal3	13	-1	58215619	3561
ENSMUSG00000116564	protein_coding	Riok2	ENSMUST00000024620	protein_coding	principal2	17	1	17374309	3220
ENSMUSG00000108751	TEC	Gm45217	ENSMUST00000206576	TEC		6	-1	91679223	1026
ENSMUSG00000026094	protein_coding	Stk17b	ENSMUST00000187066	retained_intron		1	-1	53762693	2121
ENSMUSG00000094700	protein_coding	Vmn1r158	ENSMUST00000174643	protein_coding	principal1	7	-1	22790782	924
ENSMUSG00000070880	protein_coding	Gad1	ENSMUST00000094934	protein_coding	principal1	2	1	70562042	3355
ENSMUSG00000116564	protein_coding	Riok2	ENSMUST00000232396	protein_coding	alternative2	17	1	17374572	1596
ENSMUSG00000026094	protein_coding	Stk17b	ENSMUST00000185920	protein_coding		1	-1	53785157	631
ENSMUSG00000027927	protein_coding	Lelp1	ENSMUST00000029535	protein_coding	principal1	3	-1	92142744	857
ENSMUSG00000005312	protein_coding	Ubqln1	ENSMUST00000225818	retained_intron		13	-1	58181625	1596
ENSMUSG00000093805	protein_coding	Gal3st2b	ENSMUST00000178757	protein_coding	principal2	1	1	93918311	2722
ENSMUSG00000116564	protein_coding	Riok2	ENSMUST00000232199	protein_coding		17	1	17374590	620
ENSMUSG00000005312	protein_coding	Ubqln1	ENSMUST00000225645	protein_coding		13	-1	58183324	631
ENSMUSG00000070943	protein_coding	Olfr356	ENSMUST00000095021	protein_coding	principal1	2	1	36937121	948
ENSMUSG00000032718	protein_coding	Mansc1	ENSMUST00000047443	protein_coding	principal1	6	-1	134632488	2376
ENSMUSG00000114524	sense_intronic	Gm48357	ENSMUST00000224851	sense_intronic		13	-1	58191318	650
ENSMUSG00000100654	unprocessed_pseudogene	Gm4207	ENSMUST00000173144	unprocessed_pseudogene		7	-1	22807313	960
ENSMUSG00000070880	protein_coding	Gad1	ENSMUST00000130604	nonsense_mediated_decay		2	1	70562042	1197
ENSMUSG00000093805	protein_coding	Gal3st2b	ENSMUST00000177958	protein_coding	alternative2	1	1	93928037	1191
ENSMUSG00000081888	unprocessed_pseudogene	Spcs2-ps	ENSMUST00000122326	unprocessed_pseudogene		2	-1	129379396	682
ENSMUSG00000021036	protein_coding	Sptlc2	ENSMUST00000021424	protein_coding	principal1	12	-1	87388355	6710
ENSMUSG00000095990	protein_coding	Zfp97	ENSMUST00000147630	protein_coding	principal1	17	1	17121415	2684
ENSMUSG00000081553	processed_pseudogene	Ccdc50-ps	ENSMUST00000118044	processed_pseudogene		4	-1	100568048	941
ENSMUSG00000095931	protein_coding	Vmn1r159	ENSMUST00000167871	protein_coding	principal1	7	-1	22843605	918
ENSMUSG00000108121	TEC	Gm43952	ENSMUST00000203765	TEC		6	1	134624982	751
ENSMUSG00000070880	protein_coding	Gad1	ENSMUST00000148210	protein_coding		2	1	70562196	1021
ENSMUSG00000055838	protein_coding	Olfr357	ENSMUST00000213218	protein_coding	principal1	2	1	36993827	5367
ENSMUSG00000105476	lincRNA	Gm35439	ENSMUST00000200051	lincRNA		3	1	92170221	4809
ENSMUSG00000096696	protein_coding	Zfp960	ENSMUST00000127027	protein_coding	principal1	17	1	17064113	2667
ENSMUSG00000108922	processed_pseudogene	Gm44825	ENSMUST00000207557	processed_pseudogene		7	-1	22857574	150
ENSMUSG00000084933	antisense	Gm13962	ENSMUST00000131512	antisense		2	-1	111256163	611
ENSMUSG00000070880	protein_coding	Gad1	ENSMUST00000130998	protein_coding		2	1	70562899	1705
ENSMUSG00000063844	protein_coding	Olfr1276	ENSMUST00000218065	protein_coding	principal1	2	1	111254516	5052
ENSMUSG00000116839	lincRNA	Gm49778	ENSMUST00000232488	lincRNA		17	1	16163151	262
ENSMUSG00000063844	protein_coding	Olfr1276	ENSMUST00000213658	processed_transcript		2	1	111254516	4486
ENSMUSG00000116802	lincRNA	Gm5165	ENSMUST00000231355	lincRNA		17	1	17234872	2194
ENSMUSG00000094931	protein_coding	Vmn1r160	ENSMUST00000171745	protein_coding	principal1	7	1	22871224	924
ENSMUSG00000116802	lincRNA	Gm5165	ENSMUST00000231376	lincRNA		17	1	17262350	975
ENSMUSG00000063844	protein_coding	Olfr1276	ENSMUST00000073322	protein_coding	principal1	2	1	111257117	939
ENSMUSG00000055838	protein_coding	Olfr357	ENSMUST00000069578	protein_coding	principal1	2	1	36996727	1092
ENSMUSG00000021036	protein_coding	Sptlc2	ENSMUST00000169845	retained_intron		12	-1	87343848	3769
ENSMUSG00000109514	processed_pseudogene	Gm19900	ENSMUST00000207285	processed_pseudogene		7	1	22891265	576
ENSMUSG00000102023	unprocessed_pseudogene	Gm8708	ENSMUST00000188500	unprocessed_pseudogene		7	-1	22899614	906
ENSMUSG00000021036	protein_coding	Sptlc2	ENSMUST00000170720	processed_transcript		12	-1	87328613	704
ENSMUSG00000115620	lincRNA	Gm45924	ENSMUST00000226763	lincRNA		15	-1	38728516	2766
ENSMUSG00000060149	lincRNA	BC002059	ENSMUST00000190415	lincRNA		17	1	16951539	1964
ENSMUSG00000109072	processed_pseudogene	Gm18469	ENSMUST00000208850	processed_pseudogene		7	1	22908588	439
ENSMUSG00000032966	protein_coding	Fkbp1a	ENSMUST00000044011	protein_coding	principal1	2	1	151542483	1658
ENSMUSG00000021036	protein_coding	Sptlc2	ENSMUST00000170110	retained_intron		12	-1	87350381	465
ENSMUSG00000060149	lincRNA	BC002059	ENSMUST00000232328	lincRNA		17	1	16951552	1598
ENSMUSG00000060149	lincRNA	BC002059	ENSMUST00000071374	lincRNA		17	1	16972910	861
ENSMUSG00000109345	processed_pseudogene	Gm4574	ENSMUST00000207804	processed_pseudogene		7	1	22943629	542
ENSMUSG00000116757	processed_pseudogene	Gm4786	ENSMUST00000231695	processed_pseudogene		17	1	16557246	798
ENSMUSG00000043801	processed_pseudogene	Oaz1-ps	ENSMUST00000052440	processed_pseudogene		17	-1	17346140	685
ENSMUSG00000070880	protein_coding	Gad1	ENSMUST00000155979	retained_intron		2	1	70562163	3601
ENSMUSG00000099624	unprocessed_pseudogene	Gm7889	ENSMUST00000185591	unprocessed_pseudogene		1	1	93975353	958
ENSMUSG00000021036	protein_coding	Sptlc2	ENSMUST00000167911	processed_transcript		12	-1	87388241	763
ENSMUSG00000107533	processed_pseudogene	Gm44422	ENSMUST00000204142	processed_pseudogene		6	-1	102660896	1025
ENSMUSG00000092297	protein_coding	Vmn1r258	ENSMUST00000174451	protein_coding	principal1	7	-1	22984673	960
ENSMUSG00000022673	protein_coding	Mcm4	ENSMUST00000023353	protein_coding	principal1	16	-1	15637400	3589
ENSMUSG00000094532	protein_coding	Vmn1r259	ENSMUST00000168926	protein_coding	principal1	7	-1	23019923	918
ENSMUSG00000070880	protein_coding	Gad1	ENSMUST00000140478	processed_transcript		2	1	70566377	2996
ENSMUSG00000022673	protein_coding	Mcm4	ENSMUST00000229606	protein_coding		16	-1	15635306	423
ENSMUSG00000070880	protein_coding	Gad1	ENSMUST00000130618	protein_coding		2	1	70553072	398
ENSMUSG00000043727	protein_coding	F830045P16Rik	ENSMUST00000050309	protein_coding	principal1	2	-1	129536602	1925
ENSMUSG00000056508	protein_coding	1700001K19Rik	ENSMUST00000070659	protein_coding	principal1	12	-1	110682619	955
ENSMUSG00000048027	protein_coding	Rgmb	ENSMUST00000170578	protein_coding	principal1	17	-1	15826586	5698
ENSMUSG00000022673	protein_coding	Mcm4	ENSMUST00000230437	protein_coding		16	-1	15636258	658
ENSMUSG00000070880	protein_coding	Gad1	ENSMUST00000123330	protein_coding		2	1	70563442	1138
ENSMUSG00000028936	protein_coding	Rpl22	ENSMUST00000142735	processed_transcript		4	1	152325742	581
ENSMUSG00000048027	protein_coding	Rgmb	ENSMUST00000231906	processed_transcript		17	-1	15806753	290
ENSMUSG00000056508	protein_coding	1700001K19Rik	ENSMUST00000222915	protein_coding		12	-1	110682612	385
ENSMUSG00000048027	protein_coding	Rgmb	ENSMUST00000232638	protein_coding		17	-1	15826560	2383
ENSMUSG00000086637	sense_intronic	Gm14040	ENSMUST00000139058	sense_intronic		2	-1	129515807	697
ENSMUSG00000036977	protein_coding	Anapc10	ENSMUST00000048147	protein_coding	principal1	8	1	79711820	2801
ENSMUSG00000087264	antisense	Gad1os	ENSMUST00000151851	antisense		2	-1	70563357	889
ENSMUSG00000048027	protein_coding	Rgmb	ENSMUST00000231281	protein_coding		17	-1	15830651	701
ENSMUSG00000087264	antisense	Gad1os	ENSMUST00000154284	antisense		2	-1	70491468	405
ENSMUSG00000104076	TEC	Gm37026	ENSMUST00000191917	TEC		2	-1	70523767	535
ENSMUSG00000048027	protein_coding	Rgmb	ENSMUST00000232592	processed_transcript		17	-1	15824395	301
ENSMUSG00000036977	protein_coding	Anapc10	ENSMUST00000210812	protein_coding	principal1	8	1	79711851	4591
ENSMUSG00000086515	antisense	Erich2os	ENSMUST00000150702	antisense		2	-1	70509199	608
ENSMUSG00000048027	protein_coding	Rgmb	ENSMUST00000238157	protein_coding		17	-1	15830885	742
ENSMUSG00000036977	protein_coding	Anapc10	ENSMUST00000210485	processed_transcript		8	1	79765212	584
ENSMUSG00000035139	protein_coding	Secisbp2	ENSMUST00000040117	protein_coding	principal1	13	1	51651697	3328
ENSMUSG00000110202	antisense	Gm45435	ENSMUST00000211147	antisense		8	-1	79752413	475
ENSMUSG00000048027	protein_coding	Rgmb	ENSMUST00000231985	protein_coding		17	-1	15831039	717
ENSMUSG00000110044	processed_pseudogene	Gm45434	ENSMUST00000210550	processed_pseudogene		8	-1	79773170	293
ENSMUSG00000075379	protein_coding	Olfr358	ENSMUST00000216437	protein_coding	principal1	2	-1	37009335	4962
ENSMUSG00000072761	lincRNA	Gm6712	ENSMUST00000186431	lincRNA		17	1	17294443	526
ENSMUSG00000035139	protein_coding	Secisbp2	ENSMUST00000110044	protein_coding		13	1	51651741	1915
ENSMUSG00000072761	lincRNA	Gm6712	ENSMUST00000105311	lincRNA		17	1	17316078	447
ENSMUSG00000116621	unprocessed_pseudogene	Gm7483	ENSMUST00000232084	unprocessed_pseudogene		17	1	16889355	654
ENSMUSG00000029348	protein_coding	Asphd2	ENSMUST00000031291	protein_coding	principal1	5	-1	112392213	2678
ENSMUSG00000116934	processed_pseudogene	Gm3292	ENSMUST00000231370	processed_pseudogene		17	-1	15833477	310
ENSMUSG00000025931	protein_coding	Paqr8	ENSMUST00000189400	protein_coding	principal1	1	1	20890606	5330
ENSMUSG00000116899	processed_pseudogene	Gm49777	ENSMUST00000231616	processed_pseudogene		17	-1	16163564	486
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000146923	nonsense_mediated_decay		17	-1	24936938	7278
ENSMUSG00000075379	protein_coding	Olfr358	ENSMUST00000100146	protein_coding	principal1	2	-1	37005647	1059
ENSMUSG00000021116	protein_coding	Eif2s1	ENSMUST00000071230	protein_coding	principal1	12	1	78861819	3405
ENSMUSG00000029348	protein_coding	Asphd2	ENSMUST00000198357	processed_transcript		5	-1	112389738	668
ENSMUSG00000081737	unprocessed_pseudogene	Olfr359-ps1	ENSMUST00000115977	unprocessed_pseudogene		2	-1	37020196	926
ENSMUSG00000025931	protein_coding	Paqr8	ENSMUST00000068880	protein_coding	principal1	1	1	20917840	4704
ENSMUSG00000029348	protein_coding	Asphd2	ENSMUST00000200227	protein_coding		5	-1	112394024	1322
ENSMUSG00000021116	protein_coding	Eif2s1	ENSMUST00000219754	retained_intron		12	1	78862085	1642
ENSMUSG00000110048	processed_pseudogene	Gm45433	ENSMUST00000209386	processed_pseudogene		8	-1	79803611	247
ENSMUSG00000110188	processed_pseudogene	Gm45432	ENSMUST00000210391	processed_pseudogene		8	-1	79864079	416
ENSMUSG00000029348	protein_coding	Asphd2	ENSMUST00000196256	protein_coding		5	-1	112394866	717
ENSMUSG00000021116	protein_coding	Eif2s1	ENSMUST00000220382	processed_transcript		12	1	78862130	433
ENSMUSG00000025931	protein_coding	Paqr8	ENSMUST00000187651	protein_coding	principal1	1	1	20922259	1463
ENSMUSG00000035139	protein_coding	Secisbp2	ENSMUST00000154202	processed_transcript		13	1	51651797	556
ENSMUSG00000029348	protein_coding	Asphd2	ENSMUST00000199906	protein_coding		5	-1	112393958	654
ENSMUSG00000048058	protein_coding	Ldlrad3	ENSMUST00000058790	protein_coding	principal1	2	-1	102186385	3833
ENSMUSG00000082601	processed_pseudogene	Gm12700	ENSMUST00000118145	processed_pseudogene		4	1	100581278	457
ENSMUSG00000083208	processed_pseudogene	Gm11522	ENSMUST00000120533	processed_pseudogene		11	-1	95462721	176
ENSMUSG00000035139	protein_coding	Secisbp2	ENSMUST00000127360	processed_transcript		13	1	51651797	604
ENSMUSG00000025931	protein_coding	Paqr8	ENSMUST00000167119	protein_coding	principal1	1	1	20917874	1472
ENSMUSG00000108294	processed_pseudogene	Gm44429	ENSMUST00000203542	processed_pseudogene		6	-1	102937538	186
ENSMUSG00000107445	processed_pseudogene	Gm44449	ENSMUST00000203610	processed_pseudogene		6	1	103167801	153
ENSMUSG00000108296	processed_pseudogene	Gm44295	ENSMUST00000203805	processed_pseudogene		6	-1	103279986	437
ENSMUSG00000038648	protein_coding	Creb3l2	ENSMUST00000041093	protein_coding	principal1	6	-1	37442146	7082
ENSMUSG00000100929	processed_pseudogene	Gm28064	ENSMUST00000185639	processed_pseudogene		1	1	20945711	858
ENSMUSG00000035139	protein_coding	Secisbp2	ENSMUST00000153877	retained_intron		13	1	51681773	784
ENSMUSG00000048058	protein_coding	Ldlrad3	ENSMUST00000111222	protein_coding		2	-1	102186358	3710
ENSMUSG00000091004	processed_pseudogene	Gm6872	ENSMUST00000165001	processed_pseudogene		7	-1	41669307	700
ENSMUSG00000029348	protein_coding	Asphd2	ENSMUST00000197585	protein_coding		5	-1	112394301	1086
ENSMUSG00000035139	protein_coding	Secisbp2	ENSMUST00000146011	retained_intron		13	1	51679733	751
ENSMUSG00000091401	processed_pseudogene	Gm9252	ENSMUST00000172364	processed_pseudogene		7	-1	41668118	1602
ENSMUSG00000092538	unprocessed_pseudogene	Vmn2r-ps55	ENSMUST00000173834	unprocessed_pseudogene		7	1	41722288	240
ENSMUSG00000029348	protein_coding	Asphd2	ENSMUST00000199095	protein_coding		5	-1	112393930	808
ENSMUSG00000093859	processed_pseudogene	Gm7882	ENSMUST00000177915	processed_pseudogene		5	1	43916753	1762
ENSMUSG00000005251	protein_coding	Ripk4	ENSMUST00000019386	protein_coding	principal1	16	-1	97763787	3591
ENSMUSG00000038648	protein_coding	Creb3l2	ENSMUST00000128534	processed_transcript		6	-1	37336535	648
ENSMUSG00000048058	protein_coding	Ldlrad3	ENSMUST00000127888	processed_transcript		2	-1	102138119	2337
ENSMUSG00000059565	processed_pseudogene	Gm5292	ENSMUST00000073317	processed_pseudogene		5	-1	43944482	580
ENSMUSG00000032966	protein_coding	Fkbp1a	ENSMUST00000142985	processed_transcript		2	1	151542585	783
ENSMUSG00000082328	processed_pseudogene	Gm13921	ENSMUST00000119411	processed_pseudogene		2	1	102174290	463
ENSMUSG00000020536	protein_coding	Llgl1	ENSMUST00000052346	protein_coding	principal1	11	1	60699723	4303
ENSMUSG00000118547	unprocessed_pseudogene	AC138676.1	ENSMUST00000238998	unprocessed_pseudogene		3	1	92195436	1613
ENSMUSG00000105831	TEC	Gm43184	ENSMUST00000197247	TEC		5	-1	43948661	542
ENSMUSG00000074164	transcribed_unprocessed_pseudogene	Vmn2r-ps54	ENSMUST00000150856	processed_transcript		7	1	41667979	1142
ENSMUSG00000106573	TEC	Gm43183	ENSMUST00000200632	TEC		5	1	43948116	547
ENSMUSG00000094934	protein_coding	Vmn1r163	ENSMUST00000164537	protein_coding	principal1	7	1	23055540	924
ENSMUSG00000044393	protein_coding	Dsg2	ENSMUST00000059787	protein_coding	principal1	18	1	20558074	5766
ENSMUSG00000032966	protein_coding	Fkbp1a	ENSMUST00000126670	retained_intron		2	1	151542594	2011
ENSMUSG00000085417	antisense	Gm13919	ENSMUST00000140238	antisense		2	1	102039629	1552
ENSMUSG00000114228	processed_pseudogene	Gm47605	ENSMUST00000224353	processed_pseudogene		13	1	25035059	270
ENSMUSG00000032966	protein_coding	Fkbp1a	ENSMUST00000137597	processed_transcript		2	1	151542594	603
ENSMUSG00000044393	protein_coding	Dsg2	ENSMUST00000120102	protein_coding		18	1	20558155	3590
ENSMUSG00000044393	protein_coding	Dsg2	ENSMUST00000121837	protein_coding		18	1	20558246	953
ENSMUSG00000032966	protein_coding	Fkbp1a	ENSMUST00000148295	retained_intron		2	1	151542615	662
ENSMUSG00000085417	antisense	Gm13919	ENSMUST00000123891	antisense		2	1	102039637	472
ENSMUSG00000096601	protein_coding	Vmn1r260	ENSMUST00000168392	protein_coding	principal1	7	-1	23067456	924
ENSMUSG00000032966	protein_coding	Fkbp1a	ENSMUST00000143230	processed_transcript		2	1	151542621	894
ENSMUSG00000101160	lincRNA	Gm29338	ENSMUST00000189318	lincRNA		Y	1	84677587	1499
ENSMUSG00000094684	unprocessed_pseudogene	Gm16456	ENSMUST00000174431	unprocessed_pseudogene		7	-1	23099469	920
ENSMUSG00000020536	protein_coding	Llgl1	ENSMUST00000108719	protein_coding		11	1	60699845	4268
ENSMUSG00000101160	lincRNA	Gm29338	ENSMUST00000190234	lincRNA		Y	1	84678040	438
ENSMUSG00000049761	protein_coding	Pmis2	ENSMUST00000051495	protein_coding	principal1	7	-1	30671605	699
ENSMUSG00000032966	protein_coding	Fkbp1a	ENSMUST00000144171	processed_transcript		2	1	151542696	422
ENSMUSG00000021918	protein_coding	Nek4	ENSMUST00000226551	protein_coding	alternative2	14	1	30951377	4098
ENSMUSG00000109098	processed_pseudogene	Gm18062	ENSMUST00000208020	processed_pseudogene		7	1	23130546	547
ENSMUSG00000011034	protein_coding	Slc5a1	ENSMUST00000011178	protein_coding	principal1	5	1	33104219	4104
ENSMUSG00000028864	protein_coding	Hgf	ENSMUST00000199581	protein_coding	principal3	5	1	16553550	3468
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000021870	protein_coding		13	-1	38960875	2090
ENSMUSG00000032966	protein_coding	Fkbp1a	ENSMUST00000148978	processed_transcript		2	1	151542737	438
ENSMUSG00000020536	protein_coding	Llgl1	ENSMUST00000128749	retained_intron		11	1	60704197	788
ENSMUSG00000109085	processed_pseudogene	Gm18470	ENSMUST00000207467	processed_pseudogene		7	1	23142834	420
ENSMUSG00000078664	protein_coding	Sprr2a1	ENSMUST00000074449	protein_coding	principal1	3	1	92215799	3003
ENSMUSG00000049761	protein_coding	Pmis2	ENSMUST00000186845	processed_transcript		7	-1	30671600	525
ENSMUSG00000081022	processed_pseudogene	Gm15936	ENSMUST00000118706	processed_pseudogene		5	1	33126802	460
ENSMUSG00000028864	protein_coding	Hgf	ENSMUST00000200189	retained_intron		5	1	16553579	2746
ENSMUSG00000002812	protein_coding	Flii	ENSMUST00000154141	retained_intron		11	-1	60714721	458
ENSMUSG00000092514	unprocessed_pseudogene	Vmn1r-ps86	ENSMUST00000174052	unprocessed_pseudogene		7	1	26255080	547
ENSMUSG00000075302	protein_coding	Erich2	ENSMUST00000100041	protein_coding	principal2	2	1	70508819	1749
ENSMUSG00000028864	protein_coding	Hgf	ENSMUST00000199900	retained_intron		5	1	16553751	3375
ENSMUSG00000095683	protein_coding	Gm10662	ENSMUST00000186928	protein_coding	principal1	7	-1	23144480	2495
ENSMUSG00000095683	protein_coding	Gm10662	ENSMUST00000168053	protein_coding	principal1	7	-1	23133937	942
ENSMUSG00000006304	protein_coding	Arpc2	ENSMUST00000113820	protein_coding	principal1	1	1	74236497	1439
ENSMUSG00000074164	transcribed_unprocessed_pseudogene	Vmn2r-ps54	ENSMUST00000153508	processed_transcript		7	1	41667992	1108
ENSMUSG00000048373	protein_coding	Fgfbp1	ENSMUST00000199894	protein_coding	principal1	5	-1	43981779	1228
ENSMUSG00000075302	protein_coding	Erich2	ENSMUST00000134607	protein_coding	alternative2	2	1	70508831	1659
ENSMUSG00000032966	protein_coding	Fkbp1a	ENSMUST00000142271	protein_coding		2	1	151543899	1588
ENSMUSG00000029003	protein_coding	Mad2l2	ENSMUST00000126261	processed_transcript		4	1	148130384	339
ENSMUSG00000021918	protein_coding	Nek4	ENSMUST00000228328	protein_coding	principal2	14	1	30951377	4245
ENSMUSG00000028936	protein_coding	Rpl22	ENSMUST00000103191	protein_coding	principal1	4	1	152325853	474
ENSMUSG00000028864	protein_coding	Hgf	ENSMUST00000030683	protein_coding	principal3	5	1	16553786	2642
ENSMUSG00000099840	protein_coding	Gm21409	ENSMUST00000186110	protein_coding	principal1	Y	1	84746685	923
ENSMUSG00000068893	protein_coding	Sprr2a2	ENSMUST00000071805	protein_coding	principal1	3	1	92250747	2867
ENSMUSG00000085351	antisense	Gm12472	ENSMUST00000153232	antisense		4	1	43588072	1140
ENSMUSG00000074164	transcribed_unprocessed_pseudogene	Vmn2r-ps54	ENSMUST00000150147	processed_transcript		7	1	41668014	2952
ENSMUSG00000032966	protein_coding	Fkbp1a	ENSMUST00000132614	processed_transcript		2	1	151545410	475
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000115228	protein_coding	alternative2	17	-1	24936894	5424
ENSMUSG00000028864	protein_coding	Hgf	ENSMUST00000196645	protein_coding	alternative1	5	1	16553928	2189
ENSMUSG00000074164	transcribed_unprocessed_pseudogene	Vmn2r-ps54	ENSMUST00000182110	transcribed_unprocessed_pseudogene		7	1	41686117	2587
ENSMUSG00000074164	transcribed_unprocessed_pseudogene	Vmn2r-ps54	ENSMUST00000146087	processed_transcript		7	1	41687461	789
ENSMUSG00000068893	protein_coding	Sprr2a2	ENSMUST00000090871	protein_coding	principal1	3	1	92215920	722
ENSMUSG00000006304	protein_coding	Arpc2	ENSMUST00000006467	protein_coding	principal1	1	1	74236517	1404
ENSMUSG00000048373	protein_coding	Fgfbp1	ENSMUST00000061299	protein_coding	principal1	5	-1	43981764	1161
ENSMUSG00000028936	protein_coding	Rpl22	ENSMUST00000139685	protein_coding	principal1	4	1	152325867	2051
ENSMUSG00000092193	processed_pseudogene	Cd9-ps	ENSMUST00000174687	processed_pseudogene		7	-1	41683307	650
ENSMUSG00000028063	protein_coding	Lmna	ENSMUST00000029699	protein_coding	principal1	3	-1	88503335	3156
ENSMUSG00000038102	protein_coding	Trappc11	ENSMUST00000039061	protein_coding	principal1	8	-1	47533467	4332
ENSMUSG00000117655	lincRNA	6720468P15Rik	ENSMUST00000234319	lincRNA		19	1	57497390	1594
ENSMUSG00000106339	TEC	Gm43489	ENSMUST00000196810	TEC		5	1	16572951	993
ENSMUSG00000103187	TEC	Gm37087	ENSMUST00000192966	TEC		3	-1	92246241	3309
ENSMUSG00000103286	processed_pseudogene	Gm5850	ENSMUST00000192923	processed_pseudogene		3	-1	92228674	1206
ENSMUSG00000117655	lincRNA	6720468P15Rik	ENSMUST00000234346	lincRNA		19	1	57497500	1351
ENSMUSG00000092221	unprocessed_pseudogene	Gm7230	ENSMUST00000173026	unprocessed_pseudogene		7	-1	7920811	815
ENSMUSG00000048373	protein_coding	Fgfbp1	ENSMUST00000199481	protein_coding	principal1	5	-1	43981053	2191
ENSMUSG00000028936	protein_coding	Rpl22	ENSMUST00000126519	processed_transcript		4	1	152327067	441
ENSMUSG00000041939	protein_coding	Mvk	ENSMUST00000137167	protein_coding		5	1	114444269	1049
ENSMUSG00000006304	protein_coding	Arpc2	ENSMUST00000113819	protein_coding		1	1	74236550	1313
ENSMUSG00000117655	lincRNA	6720468P15Rik	ENSMUST00000234920	lincRNA		19	1	57497762	612
ENSMUSG00000086124	lincRNA	A530076I17Rik	ENSMUST00000228352	lincRNA		14	-1	45667340	1524
ENSMUSG00000101045	unprocessed_pseudogene	Gm29224	ENSMUST00000187965	unprocessed_pseudogene		Y	-1	56353948	615
ENSMUSG00000028936	protein_coding	Rpl22	ENSMUST00000127659	processed_transcript		4	1	152327126	732
ENSMUSG00000117655	lincRNA	6720468P15Rik	ENSMUST00000234049	lincRNA		19	1	57497764	603
ENSMUSG00000021918	protein_coding	Nek4	ENSMUST00000228392	retained_intron		14	1	30951411	6686
ENSMUSG00000011154	protein_coding	Cfap161	ENSMUST00000119134	protein_coding	alternative2	7	-1	83794819	2868
ENSMUSG00000099920	unprocessed_pseudogene	Gm29223	ENSMUST00000188867	unprocessed_pseudogene		Y	-1	56390846	695
ENSMUSG00000021918	protein_coding	Nek4	ENSMUST00000050171	protein_coding		14	1	30951458	2793
ENSMUSG00000029310	protein_coding	Nudt9	ENSMUST00000128511	protein_coding		5	1	104046306	829
ENSMUSG00000028063	protein_coding	Lmna	ENSMUST00000135494	processed_transcript		3	-1	88503337	901
ENSMUSG00000086124	lincRNA	A530076I17Rik	ENSMUST00000138379	lincRNA		14	-1	45668498	2408
ENSMUSG00000028063	protein_coding	Lmna	ENSMUST00000150496	retained_intron		3	-1	88482864	543
ENSMUSG00000026004	protein_coding	Kansl1l	ENSMUST00000129190	protein_coding		1	-1	66801210	3470
ENSMUSG00000075302	protein_coding	Erich2	ENSMUST00000123137	retained_intron		2	1	70509460	513
ENSMUSG00000117655	lincRNA	6720468P15Rik	ENSMUST00000235008	lincRNA		19	1	57508564	1699
ENSMUSG00000028936	protein_coding	Rpl22	ENSMUST00000150485	processed_transcript		4	1	152327480	576
ENSMUSG00000021918	protein_coding	Nek4	ENSMUST00000226833	protein_coding	alternative2	14	1	30951478	1252
ENSMUSG00000028936	protein_coding	Rpl22	ENSMUST00000156445	processed_transcript		4	1	152327557	369
ENSMUSG00000056481	protein_coding	Cd248	ENSMUST00000070630	protein_coding	principal1	19	1	5068078	2605
ENSMUSG00000117655	lincRNA	6720468P15Rik	ENSMUST00000234605	lincRNA		19	1	57509066	905
ENSMUSG00000001100	protein_coding	Poldip2	ENSMUST00000001127	protein_coding	principal1	11	1	78512193	2054
ENSMUSG00000028936	protein_coding	Rpl22	ENSMUST00000188151	protein_coding	principal1	4	1	152325869	2048
ENSMUSG00000011154	protein_coding	Cfap161	ENSMUST00000011298	protein_coding	principal2	7	-1	83794880	1335
ENSMUSG00000081174	processed_pseudogene	Gm13439	ENSMUST00000117541	processed_pseudogene		2	1	37036024	409
ENSMUSG00000075302	protein_coding	Erich2	ENSMUST00000136967	retained_intron		2	1	70509460	1865
ENSMUSG00000013083	protein_coding	2200002J24Rik	ENSMUST00000207565	lincRNA		7	1	30698926	612
ENSMUSG00000075302	protein_coding	Erich2	ENSMUST00000153121	protein_coding		2	1	70509497	302
ENSMUSG00000021918	protein_coding	Nek4	ENSMUST00000227602	processed_transcript		14	1	30951499	425
ENSMUSG00000011154	protein_coding	Cfap161	ENSMUST00000208785	processed_transcript		7	-1	83784012	950
ENSMUSG00000001100	protein_coding	Poldip2	ENSMUST00000136284	processed_transcript		11	1	78512388	479
ENSMUSG00000109909	TEC	Gm45663	ENSMUST00000210429	TEC		8	1	104152706	1632
ENSMUSG00000013083	protein_coding	2200002J24Rik	ENSMUST00000207260	lincRNA		7	1	30698936	598
ENSMUSG00000038641	protein_coding	Akr1d1	ENSMUST00000040987	protein_coding	principal1	6	1	37530173	2699
ENSMUSG00000021918	protein_coding	Nek4	ENSMUST00000227199	retained_intron		14	1	30951516	1317
ENSMUSG00000021918	protein_coding	Nek4	ENSMUST00000226146	protein_coding		14	1	30956915	2132
ENSMUSG00000011154	protein_coding	Cfap161	ENSMUST00000149671	protein_coding		7	-1	83794171	566
ENSMUSG00000028063	protein_coding	Lmna	ENSMUST00000120377	protein_coding		3	-1	88503307	2021
ENSMUSG00000013083	protein_coding	2200002J24Rik	ENSMUST00000207437	lincRNA		7	1	30698952	580
ENSMUSG00000074965	protein_coding	Olfr1277	ENSMUST00000214760	protein_coding	principal1	2	-1	111274106	5944
ENSMUSG00000013083	protein_coding	2200002J24Rik	ENSMUST00000013227	protein_coding	principal1	7	1	30699783	333
ENSMUSG00000005718	protein_coding	Tfap4	ENSMUST00000005862	protein_coding	principal1	16	-1	4559854	2247
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000225432	protein_coding	principal1	13	-1	38960824	2216
ENSMUSG00000090968	unprocessed_pseudogene	Gm3978	ENSMUST00000163406	unprocessed_pseudogene		7	-1	7964378	2512
ENSMUSG00000038641	protein_coding	Akr1d1	ENSMUST00000123648	processed_transcript		6	1	37539681	415
ENSMUSG00000102405	TEC	Gm37863	ENSMUST00000194911	TEC		1	1	53791201	1457
ENSMUSG00000074965	protein_coding	Olfr1277	ENSMUST00000099619	protein_coding	principal1	2	-1	111270388	962
ENSMUSG00000001100	protein_coding	Poldip2	ENSMUST00000133601	nonsense_mediated_decay		11	1	78512416	1329
ENSMUSG00000106889	processed_pseudogene	Gm7463	ENSMUST00000201541	processed_pseudogene		6	1	37541414	547
ENSMUSG00000041278	protein_coding	Ttc1	ENSMUST00000109278	protein_coding	alternative2	11	-1	43748008	1965
ENSMUSG00000101021	lincRNA	Gm29222	ENSMUST00000185442	lincRNA		Y	-1	56400297	2167
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000071921	protein_coding	principal1	5	-1	9161776	3806
ENSMUSG00000005718	protein_coding	Tfap4	ENSMUST00000230875	protein_coding		16	-1	4558783	809
ENSMUSG00000109898	lincRNA	6330420H09Rik	ENSMUST00000211371	lincRNA		7	1	135853682	1316
ENSMUSG00000041278	protein_coding	Ttc1	ENSMUST00000147984	processed_transcript		11	-1	43747992	501
ENSMUSG00000005718	protein_coding	Tfap4	ENSMUST00000229956	protein_coding		16	-1	4552962	788
ENSMUSG00000109535	unprocessed_pseudogene	Gm8728	ENSMUST00000207367	unprocessed_pseudogene		7	1	23166873	2178
ENSMUSG00000026004	protein_coding	Kansl1l	ENSMUST00000068168	protein_coding	principal1	1	-1	66817546	4459
ENSMUSG00000099485	lincRNA	Gm29221	ENSMUST00000186092	lincRNA		Y	1	56420276	2894
ENSMUSG00000029310	protein_coding	Nudt9	ENSMUST00000150226	protein_coding		5	1	104046526	995
ENSMUSG00000028063	protein_coding	Lmna	ENSMUST00000036252	protein_coding		3	-1	88493312	1536
ENSMUSG00000001100	protein_coding	Poldip2	ENSMUST00000147930	retained_intron		11	1	78516229	871
ENSMUSG00000110078	lincRNA	Gm45241	ENSMUST00000211237	lincRNA		7	-1	135854448	634
ENSMUSG00000001100	protein_coding	Poldip2	ENSMUST00000156754	retained_intron		11	1	78516819	794
ENSMUSG00000085085	lincRNA	1700086P04Rik	ENSMUST00000149472	lincRNA		4	-1	129057983	1009
ENSMUSG00000099548	lincRNA	Gm29220	ENSMUST00000185862	lincRNA		Y	1	56438870	1501
ENSMUSG00000026004	protein_coding	Kansl1l	ENSMUST00000113987	protein_coding		1	-1	66817562	2342
ENSMUSG00000025630	protein_coding	Hprt	ENSMUST00000026723	protein_coding	principal1	X	1	52988137	1289
ENSMUSG00000074128	antisense	Gm10631	ENSMUST00000153288	antisense		8	-1	104184599	494
ENSMUSG00000001100	protein_coding	Poldip2	ENSMUST00000151499	retained_intron		11	1	78518331	731
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000079573	protein_coding		6	-1	146502178	11679
ENSMUSG00000092619	unprocessed_pseudogene	Gm20438	ENSMUST00000174441	unprocessed_pseudogene		7	-1	7978155	329
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000117509	protein_coding	alternative2	17	-1	24936912	5418
ENSMUSG00000026004	protein_coding	Kansl1l	ENSMUST00000132960	processed_transcript		1	-1	66808794	2802
ENSMUSG00000028063	protein_coding	Lmna	ENSMUST00000149068	protein_coding		3	-1	88509956	785
ENSMUSG00000026004	protein_coding	Kansl1l	ENSMUST00000189846	retained_intron		1	-1	66817546	1600
ENSMUSG00000110674	antisense	Gm45892	ENSMUST00000212627	antisense		8	-1	104218299	273
ENSMUSG00000102374	TEC	Gm38387	ENSMUST00000191945	TEC		1	-1	66771866	2577
ENSMUSG00000038102	protein_coding	Trappc11	ENSMUST00000123958	retained_intron		8	-1	47525017	3932
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000106388	protein_coding	alternative2	11	1	116530925	1891
ENSMUSG00000101603	lincRNA	Gm28730	ENSMUST00000191072	lincRNA		X	-1	53052615	665
ENSMUSG00000041278	protein_coding	Ttc1	ENSMUST00000048578	protein_coding	principal2	11	-1	43747982	1438
ENSMUSG00000101603	lincRNA	Gm28730	ENSMUST00000185939	lincRNA		X	-1	53052599	702
ENSMUSG00000082057	processed_pseudogene	Gm15789	ENSMUST00000118992	processed_pseudogene		1	1	66783913	1359
ENSMUSG00000061451	protein_coding	Tmem151a	ENSMUST00000143677	processed_transcript		19	-1	5072132	633
ENSMUSG00000022296	protein_coding	Baalc	ENSMUST00000163313	protein_coding	principal1	15	1	38933144	2492
ENSMUSG00000101603	lincRNA	Gm28730	ENSMUST00000186426	lincRNA		X	-1	53053159	369
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000225461	nonsense_mediated_decay		13	-1	38960496	1701
ENSMUSG00000019256	protein_coding	Ahr	ENSMUST00000116436	protein_coding	principal1	12	-1	35535038	5548
ENSMUSG00000103706	TEC	6820402A03Rik	ENSMUST00000194648	TEC		1	-1	66796298	2654
ENSMUSG00000022296	protein_coding	Baalc	ENSMUST00000226440	protein_coding		15	1	38933909	3963
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000121787	protein_coding	alternative2	17	-1	24936967	5431
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000084738	protein_coding	alternative2	7	-1	109616553	3161
ENSMUSG00000102776	TEC	Gm38162	ENSMUST00000195562	TEC		1	1	66775511	4597
ENSMUSG00000061451	protein_coding	Tmem151a	ENSMUST00000140389	protein_coding		19	-1	5085487	507
ENSMUSG00000046130	protein_coding	Vmn1r184	ENSMUST00000227232	protein_coding	principal1	7	1	26260334	8472
ENSMUSG00000102559	TEC	Gm37570	ENSMUST00000195411	TEC		1	-1	66768731	3106
ENSMUSG00000114994	antisense	Gm49097	ENSMUST00000227931	antisense		15	-1	38938622	3815
ENSMUSG00000085438	lincRNA	Oip5os1	ENSMUST00000147425	lincRNA		2	1	119594297	1381
ENSMUSG00000046130	protein_coding	Vmn1r184	ENSMUST00000228145	protein_coding	principal1	7	1	26260334	5888
ENSMUSG00000061451	protein_coding	Tmem151a	ENSMUST00000151413	protein_coding		19	-1	5085487	333
ENSMUSG00000038102	protein_coding	Trappc11	ENSMUST00000125065	retained_intron		8	-1	47533470	4646
ENSMUSG00000029310	protein_coding	Nudt9	ENSMUST00000031250	protein_coding	principal1	5	1	104046869	1488
ENSMUSG00000103756	TEC	Gm37285	ENSMUST00000194465	TEC		1	-1	66800797	1139
ENSMUSG00000041995	protein_coding	Zbed3	ENSMUST00000221807	protein_coding	principal1	13	1	95323612	1945
ENSMUSG00000046130	protein_coding	Vmn1r184	ENSMUST00000228369	protein_coding	principal1	7	1	26260334	6361
ENSMUSG00000019256	protein_coding	Ahr	ENSMUST00000110811	nonsense_mediated_decay		12	-1	35534623	1155
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000167513	protein_coding	principal1	13	-1	38960529	1778
ENSMUSG00000046130	protein_coding	Vmn1r184	ENSMUST00000227790	protein_coding	principal1	7	1	26260334	4334
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000053273	protein_coding	principal1	6	-1	146501912	8331
ENSMUSG00000046130	protein_coding	Vmn1r184	ENSMUST00000227534	protein_coding	principal1	7	1	26260334	4807
ENSMUSG00000019256	protein_coding	Ahr	ENSMUST00000173414	retained_intron		12	-1	35526779	818
ENSMUSG00000026005	protein_coding	Rpe	ENSMUST00000151016	nonsense_mediated_decay		1	1	66700831	781
ENSMUSG00000038102	protein_coding	Trappc11	ENSMUST00000120987	protein_coding		8	-1	47511348	2060
ENSMUSG00000038239	protein_coding	Hrc	ENSMUST00000085351	protein_coding	principal1	7	1	45335290	2411
ENSMUSG00000113580	lincRNA	Gm48237	ENSMUST00000220905	lincRNA		12	1	35546031	2102
ENSMUSG00000038102	protein_coding	Trappc11	ENSMUST00000131551	retained_intron		8	-1	47528030	600
ENSMUSG00000046130	protein_coding	Vmn1r184	ENSMUST00000227230	protein_coding	principal1	7	1	26260334	7999
ENSMUSG00000041995	protein_coding	Zbed3	ENSMUST00000045909	protein_coding	principal1	13	1	95325237	1894
ENSMUSG00000061451	protein_coding	Tmem151a	ENSMUST00000077066	protein_coding	principal1	19	-1	5085531	4006
ENSMUSG00000091393	antisense	5330438I03Rik	ENSMUST00000168347	antisense		1	-1	166309585	2845
ENSMUSG00000029310	protein_coding	Nudt9	ENSMUST00000142018	retained_intron		5	1	104046968	932
ENSMUSG00000100513	processed_pseudogene	Rpl23a-ps11	ENSMUST00000191583	processed_pseudogene		7	1	32388481	463
ENSMUSG00000046130	protein_coding	Vmn1r184	ENSMUST00000057123	protein_coding	principal1	7	1	26266831	945
ENSMUSG00000038239	protein_coding	Hrc	ENSMUST00000211327	protein_coding		7	1	45335347	607
ENSMUSG00000029310	protein_coding	Nudt9	ENSMUST00000134313	protein_coding		5	1	104047154	729
ENSMUSG00000061451	protein_coding	Tmem151a	ENSMUST00000136372	processed_transcript		19	-1	5084881	266
ENSMUSG00000041995	protein_coding	Zbed3	ENSMUST00000222456	protein_coding		13	1	95326767	650
ENSMUSG00000015189	protein_coding	Casd1	ENSMUST00000015333	protein_coding	principal1	6	1	4600839	3961
ENSMUSG00000117893	antisense	Gm46658	ENSMUST00000237721	antisense		19	1	5072229	1421
ENSMUSG00000113741	lincRNA	Gm48236	ENSMUST00000223092	lincRNA		12	1	35534421	817
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000137938	processed_transcript		6	-1	146147208	760
ENSMUSG00000029310	protein_coding	Nudt9	ENSMUST00000148261	protein_coding		5	1	104047621	482
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000225396	protein_coding		13	-1	38943152	2486
ENSMUSG00000092294	unprocessed_pseudogene	Gm18200	ENSMUST00000173265	unprocessed_pseudogene		7	-1	7986446	833
ENSMUSG00000109450	lincRNA	Gm39043	ENSMUST00000207602	lincRNA		7	1	83814707	2081
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000077909	protein_coding	principal4	7	-1	109616753	4612
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000203292	protein_coding		6	-1	146227543	575
ENSMUSG00000015189	protein_coding	Casd1	ENSMUST00000181734	protein_coding		6	1	4600949	1063
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000225568	protein_coding		13	-1	38960537	890
ENSMUSG00000106035	TEC	Gm43545	ENSMUST00000196765	TEC		5	-1	104047397	2779
ENSMUSG00000056257	TEC	Gm5447	ENSMUST00000238501	TEC		13	1	30974164	2085
ENSMUSG00000056257	TEC	Gm5447	ENSMUST00000070258	TEC		13	1	30974204	1773
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000138840	protein_coding		11	1	116531121	735
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000155339	processed_transcript		6	-1	146196960	556
ENSMUSG00000078757	protein_coding	Scgb1b29	ENSMUST00000108094	protein_coding	principal1	7	1	32441541	282
ENSMUSG00000109248	lincRNA	Gm44993	ENSMUST00000208435	lincRNA		7	-1	83834599	842
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000207664	processed_transcript		7	-1	109540433	514
ENSMUSG00000083361	protein_coding	Olfr360	ENSMUST00000216706	protein_coding	principal1	2	1	37065746	1816
ENSMUSG00000015189	protein_coding	Casd1	ENSMUST00000153963	nonsense_mediated_decay		6	1	4601146	444
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000204901	retained_intron		6	-1	146232479	1504
ENSMUSG00000085438	lincRNA	Oip5os1	ENSMUST00000153581	lincRNA		2	1	119594303	8300
ENSMUSG00000015189	protein_coding	Casd1	ENSMUST00000141359	protein_coding		6	1	4601203	547
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000144557	retained_intron		6	-1	146294284	480
ENSMUSG00000083361	protein_coding	Olfr360	ENSMUST00000120704	protein_coding	principal1	2	1	37068307	954
ENSMUSG00000073608	protein_coding	Gal3st2c	ENSMUST00000097632	protein_coding	principal1	1	1	93990509	9667
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000088345	protein_coding	principal3	17	-1	24936968	5543
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000136526	retained_intron		11	1	116531162	600
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000131890	protein_coding		6	-1	146396986	1978
ENSMUSG00000015189	protein_coding	Casd1	ENSMUST00000204372	protein_coding		6	1	4631127	396
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000106387	protein_coding	alternative2	11	1	116531744	1957
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000208557	retained_intron		7	-1	109616391	2991
ENSMUSG00000045521	protein_coding	Tssk2	ENSMUST00000055374	protein_coding	principal1	16	1	17898637	1388
ENSMUSG00000101064	unprocessed_pseudogene	Gm18798	ENSMUST00000187264	unprocessed_pseudogene		Y	1	2678944	1700
ENSMUSG00000053604	protein_coding	Rpia	ENSMUST00000066134	protein_coding	principal1	6	-1	70792232	1829
ENSMUSG00000045252	protein_coding	Zfp574	ENSMUST00000206733	processed_transcript		7	1	25072567	446
ENSMUSG00000041939	protein_coding	Mvk	ENSMUST00000112239	protein_coding	alternative2	5	1	114444286	1602
ENSMUSG00000045252	protein_coding	Zfp574	ENSMUST00000206530	processed_transcript		7	1	25072646	635
ENSMUSG00000109163	processed_pseudogene	3110009M11Rik	ENSMUST00000208647	processed_pseudogene		7	-1	83865481	892
ENSMUSG00000068647	protein_coding	Olfr1278	ENSMUST00000214669	nonsense_mediated_decay		2	1	111290136	6519
ENSMUSG00000068647	protein_coding	Olfr1278	ENSMUST00000215210	protein_coding	principal1	2	1	111290136	6901
ENSMUSG00000109552	TEC	Gm44531	ENSMUST00000208364	TEC		7	1	83866777	2000
ENSMUSG00000053604	protein_coding	Rpia	ENSMUST00000124633	retained_intron		6	-1	70773692	739
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000100201	protein_coding	alternative2	11	1	116531911	1800
ENSMUSG00000068647	protein_coding	Olfr1278	ENSMUST00000216229	protein_coding	principal1	2	1	111290174	6819
ENSMUSG00000040913	protein_coding	Fbxw4	ENSMUST00000160718	protein_coding		19	-1	45631138	1295
ENSMUSG00000109452	TEC	Gm44530	ENSMUST00000207920	TEC		7	1	83874362	3559
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000224645	protein_coding		13	-1	38960507	802
ENSMUSG00000005054	protein_coding	Cstb	ENSMUST00000005185	protein_coding	principal1	10	1	78425669	603
ENSMUSG00000053604	protein_coding	Rpia	ENSMUST00000129244	retained_intron		6	-1	70792003	3644
ENSMUSG00000068647	protein_coding	Olfr1278	ENSMUST00000213516	nonsense_mediated_decay		2	1	111290184	2105
ENSMUSG00000068647	protein_coding	Olfr1278	ENSMUST00000213727	protein_coding	principal1	2	1	111290628	6744
ENSMUSG00000028310	protein_coding	Ppp3r2	ENSMUST00000029991	protein_coding	principal1	4	-1	49682024	3026
ENSMUSG00000024807	protein_coding	Syvn1	ENSMUST00000138532	protein_coding	principal2	19	1	6046576	3464
ENSMUSG00000045252	protein_coding	Zfp574	ENSMUST00000179556	protein_coding	principal1	7	1	25077205	4140
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000224429	nonsense_mediated_decay		13	-1	38960485	751
ENSMUSG00000041939	protein_coding	Mvk	ENSMUST00000125120	retained_intron		5	1	114444294	2380
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000207745	protein_coding		7	-1	109703605	362
ENSMUSG00000068647	protein_coding	Olfr1278	ENSMUST00000090330	protein_coding	principal1	2	1	111292270	942
ENSMUSG00000037466	protein_coding	Tedc1	ENSMUST00000049271	protein_coding	principal1	12	1	113156421	2441
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000208981	processed_transcript		7	-1	109616753	737
ENSMUSG00000083153	processed_pseudogene	Gm12459	ENSMUST00000120659	processed_pseudogene		4	-1	49747246	356
ENSMUSG00000041939	protein_coding	Mvk	ENSMUST00000124260	protein_coding		5	1	114444303	1051
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000208583	protein_coding		7	-1	109602665	439
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000121723	protein_coding	alternative2	17	-1	24936929	5410
ENSMUSG00000024807	protein_coding	Syvn1	ENSMUST00000129081	protein_coding		19	1	6046638	842
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000225714	nonsense_mediated_decay		13	-1	38960513	821
ENSMUSG00000041939	protein_coding	Mvk	ENSMUST00000125650	protein_coding		5	1	114444303	913
ENSMUSG00000110055	unprocessed_pseudogene	Gm18857	ENSMUST00000210421	unprocessed_pseudogene		13	1	4035245	901
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000223619	retained_intron		13	-1	38960480	1252
ENSMUSG00000070462	protein_coding	Tlnrd1	ENSMUST00000094216	protein_coding	principal1	7	-1	83884305	4433
ENSMUSG00000024807	protein_coding	Syvn1	ENSMUST00000156550	protein_coding	alternative2	19	1	6046662	3363
ENSMUSG00000037466	protein_coding	Tedc1	ENSMUST00000196505	retained_intron		12	1	113156430	394
ENSMUSG00000030042	protein_coding	Pole4	ENSMUST00000161309	processed_transcript		6	-1	82705365	457
ENSMUSG00000050822	protein_coding	Slc29a4	ENSMUST00000198728	protein_coding		5	1	142692512	406
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000139732	nonsense_mediated_decay		6	-1	146502223	2834
ENSMUSG00000045252	protein_coding	Zfp574	ENSMUST00000053410	protein_coding	principal1	7	1	25077284	3145
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000207394	protein_coding		7	-1	109672353	553
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000208734	protein_coding		7	-1	109672086	362
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000225331	protein_coding		13	-1	38960499	781
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000147109	retained_intron		17	-1	24899717	934
ENSMUSG00000104408	processed_pseudogene	Gm38015	ENSMUST00000193048	processed_pseudogene		6	-1	41011368	188
ENSMUSG00000041939	protein_coding	Mvk	ENSMUST00000043760	protein_coding	principal3	5	1	114444306	1660
ENSMUSG00000082014	processed_pseudogene	Gm11371	ENSMUST00000120294	processed_pseudogene		13	1	31009177	385
ENSMUSG00000021432	protein_coding	Slc35b3	ENSMUST00000224854	retained_intron		13	-1	38960532	1321
ENSMUSG00000023165	protein_coding	Ssxb2	ENSMUST00000103000	protein_coding	alternative2	X	-1	8461726	750
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000079282	protein_coding	principal4	7	-1	109617147	4255
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000145418	retained_intron		6	-1	146502178	2464
ENSMUSG00000031024	protein_coding	Denn2b	ENSMUST00000168005	protein_coding	alternative2	7	-1	109617147	3004
ENSMUSG00000041939	protein_coding	Mvk	ENSMUST00000139420	protein_coding		5	1	114452420	412
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000106386	protein_coding	alternative2	11	1	116532444	1879
ENSMUSG00000024807	protein_coding	Syvn1	ENSMUST00000235478	retained_intron		19	1	6047061	3905
ENSMUSG00000030287	protein_coding	Itpr2	ENSMUST00000111673	processed_transcript		6	-1	146501878	582
ENSMUSG00000082120	processed_pseudogene	Gm15720	ENSMUST00000117133	processed_pseudogene		6	-1	146463607	282
ENSMUSG00000109499	antisense	Gm44864	ENSMUST00000207292	antisense		7	1	109699525	505
ENSMUSG00000009090	protein_coding	Ap1b1	ENSMUST00000109897	protein_coding		11	1	4986824	3942
ENSMUSG00000096932	antisense	5033403F01Rik	ENSMUST00000181376	antisense		13	1	38960619	1678
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000184159	nonsense_mediated_decay		5	-1	9161719	3453
ENSMUSG00000037466	protein_coding	Tedc1	ENSMUST00000196755	nonsense_mediated_decay		12	1	113156440	4000
ENSMUSG00000107743	TEC	Gm44087	ENSMUST00000204247	TEC		6	1	146376417	1770
ENSMUSG00000118494	processed_pseudogene	AC183097.1	ENSMUST00000238962	processed_pseudogene		17	-1	6321736	292
ENSMUSG00000034780	protein_coding	B3galt1	ENSMUST00000188614	processed_transcript		2	1	67565871	444
ENSMUSG00000009090	protein_coding	Ap1b1	ENSMUST00000101613	protein_coding		11	1	5009530	3735
ENSMUSG00000037466	protein_coding	Tedc1	ENSMUST00000199382	retained_intron		12	1	113156456	624
ENSMUSG00000082545	processed_pseudogene	Gm12196	ENSMUST00000120954	processed_pseudogene		11	1	50347628	262
ENSMUSG00000107801	TEC	Gm44086	ENSMUST00000203251	TEC		6	-1	146270980	2349
ENSMUSG00000034780	protein_coding	B3galt1	ENSMUST00000180887	protein_coding		2	1	67748212	769
ENSMUSG00000094843	processed_pseudogene	Ppp1r2-ps1	ENSMUST00000178232	processed_pseudogene		17	-1	6324642	618
ENSMUSG00000034000	protein_coding	Neu4	ENSMUST00000190212	protein_coding	alternative2	1	1	94020451	1719
ENSMUSG00000023165	protein_coding	Ssxb2	ENSMUST00000023931	protein_coding	principal3	X	-1	8461726	927
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000134834	retained_intron		11	1	116532451	4063
ENSMUSG00000037466	protein_coding	Tedc1	ENSMUST00000200522	nonsense_mediated_decay		12	1	113156506	584
ENSMUSG00000031872	protein_coding	Bean1	ENSMUST00000164076	protein_coding	alternative2	8	1	104170442	2423
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000145737	protein_coding		11	1	116532454	904
ENSMUSG00000083054	processed_pseudogene	Gm12986	ENSMUST00000119037	processed_pseudogene		4	-1	136609806	967
ENSMUSG00000037466	protein_coding	Tedc1	ENSMUST00000198072	retained_intron		12	1	113157571	2018
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000155102	protein_coding		11	1	116532457	663
ENSMUSG00000030042	protein_coding	Pole4	ENSMUST00000160281	protein_coding	alternative1	6	-1	82652870	648
ENSMUSG00000024807	protein_coding	Syvn1	ENSMUST00000142101	retained_intron		19	1	6047065	4080
ENSMUSG00000082475	processed_pseudogene	Gm7206	ENSMUST00000117730	processed_pseudogene		14	1	45704536	508
ENSMUSG00000050087	protein_coding	Cby3	ENSMUST00000052596	protein_coding		11	1	50357761	703
ENSMUSG00000082662	processed_pseudogene	Gm15516	ENSMUST00000117292	processed_pseudogene		14	-1	45713324	193
ENSMUSG00000116812	unprocessed_pseudogene	Gm2792	ENSMUST00000231574	unprocessed_pseudogene		17	-1	6361848	3159
ENSMUSG00000034780	protein_coding	B3galt1	ENSMUST00000042456	protein_coding	principal1	2	1	68104671	2855
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000063446	protein_coding	alternative2	11	1	116532473	2527
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000119115	protein_coding	alternative2	17	-1	24936960	4173
ENSMUSG00000050087	protein_coding	Cby3	ENSMUST00000164067	protein_coding	principal1	11	1	50354462	731
ENSMUSG00000028247	protein_coding	Coq3	ENSMUST00000029909	protein_coding	principal1	4	1	21879673	2651
ENSMUSG00000087015	antisense	Gm14041	ENSMUST00000150181	antisense		2	-1	129566068	276
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000095017	protein_coding		5	-1	9161749	3498
ENSMUSG00000116992	unprocessed_pseudogene	Gm29719	ENSMUST00000231438	unprocessed_pseudogene		17	-1	6411531	985
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000063396	protein_coding	alternative2	11	1	116532925	2659
ENSMUSG00000116921	processed_pseudogene	Gm49693	ENSMUST00000232389	processed_pseudogene		17	-1	6355526	838
ENSMUSG00000028247	protein_coding	Coq3	ENSMUST00000142244	processed_transcript		4	1	21898712	628
ENSMUSG00000030042	protein_coding	Pole4	ENSMUST00000095786	protein_coding	principal2	6	-1	82652929	1769
ENSMUSG00000040913	protein_coding	Fbxw4	ENSMUST00000046869	protein_coding	principal1	19	-1	45660312	2068
ENSMUSG00000034780	protein_coding	B3galt1	ENSMUST00000112346	protein_coding	principal1	2	1	68117713	4977
ENSMUSG00000034000	protein_coding	Neu4	ENSMUST00000050890	protein_coding	principal3	1	1	94020493	4511
ENSMUSG00000024807	protein_coding	Syvn1	ENSMUST00000134667	protein_coding	principal2	19	1	6047080	3159
ENSMUSG00000050822	protein_coding	Slc29a4	ENSMUST00000058418	protein_coding	principal1	5	1	142702101	2789
ENSMUSG00000081299	processed_pseudogene	Gm13603	ENSMUST00000119404	processed_pseudogene		2	1	67765977	83
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000150658	processed_transcript		11	1	116533251	740
ENSMUSG00000107452	processed_pseudogene	Gm18215	ENSMUST00000204429	processed_pseudogene		14	-1	26563076	798
ENSMUSG00000009090	protein_coding	Ap1b1	ENSMUST00000144426	processed_transcript		11	1	5009474	361
ENSMUSG00000030042	protein_coding	Pole4	ENSMUST00000141138	processed_transcript		6	-1	82652520	890
ENSMUSG00000116719	processed_transcript	Gm29719	ENSMUST00000232402	processed_transcript		17	-1	6411834	1690
ENSMUSG00000040913	protein_coding	Fbxw4	ENSMUST00000160018	protein_coding		19	-1	45593499	931
ENSMUSG00000033715	protein_coding	Akr1c14	ENSMUST00000118717	protein_coding	principal1	13	1	4049011	3183
ENSMUSG00000009090	protein_coding	Ap1b1	ENSMUST00000145704	processed_transcript		11	1	5030977	717
ENSMUSG00000096875	unprocessed_pseudogene	Gm21815	ENSMUST00000178213	unprocessed_pseudogene		Y	1	56502245	664
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000154034	protein_coding		11	1	116533268	1050
ENSMUSG00000108897	TEC	Gm44861	ENSMUST00000208325	TEC		7	1	90042697	1220
ENSMUSG00000097067	lincRNA	Gm26743	ENSMUST00000180913	lincRNA		2	-1	67687282	1726
ENSMUSG00000110004	TEC	Gm45440	ENSMUST00000209826	TEC		7	1	135892815	1655
ENSMUSG00000030042	protein_coding	Pole4	ENSMUST00000140281	processed_transcript		6	-1	82652518	455
ENSMUSG00000079704	protein_coding	Gm14459	ENSMUST00000115573	protein_coding	principal1	X	-1	8524954	540
ENSMUSG00000024807	protein_coding	Syvn1	ENSMUST00000144328	retained_intron		19	1	6047085	1077
ENSMUSG00000024807	protein_coding	Syvn1	ENSMUST00000025723	protein_coding	alternative2	19	1	6047104	2780
ENSMUSG00000081257	processed_pseudogene	Gm13607	ENSMUST00000117875	processed_pseudogene		2	1	68081791	539
ENSMUSG00000109245	TEC	Gm44860	ENSMUST00000208473	TEC		7	1	90030571	2346
ENSMUSG00000040913	protein_coding	Fbxw4	ENSMUST00000162433	protein_coding		19	-1	45593467	789
ENSMUSG00000110113	processed_pseudogene	Gm45439	ENSMUST00000211723	processed_pseudogene		7	-1	135907814	359
ENSMUSG00000099978	unprocessed_pseudogene	Gm29407	ENSMUST00000191468	unprocessed_pseudogene		Y	-1	56726297	696
ENSMUSG00000107453	antisense	Gm44145	ENSMUST00000203711	antisense		6	1	82680132	172
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000124682	protein_coding		11	1	116533575	863
ENSMUSG00000109813	protein_coding	Olfr1279	ENSMUST00000216697	protein_coding	alternative1	2	1	111300635	3385
ENSMUSG00000104398	TEC	Gm37964	ENSMUST00000192459	TEC		2	1	67898596	4905
ENSMUSG00000109038	TEC	Gm45120	ENSMUST00000208880	TEC		7	-1	89965394	408
ENSMUSG00000109813	protein_coding	Olfr1279	ENSMUST00000213823	protein_coding	alternative1	2	1	111300682	3299
ENSMUSG00000079702	protein_coding	Ssxb6	ENSMUST00000138642	protein_coding	principal1	X	-1	8548255	518
ENSMUSG00000009090	protein_coding	Ap1b1	ENSMUST00000142325	processed_transcript		11	1	5037369	847
ENSMUSG00000098185	processed_pseudogene	Gm9146	ENSMUST00000182254	processed_pseudogene		7	1	32473252	1006
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000120035	protein_coding	alternative2	17	-1	24936968	4125
ENSMUSG00000033715	protein_coding	Akr1c14	ENSMUST00000147180	nonsense_mediated_decay		13	1	4078254	587
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000148185	retained_intron		11	1	116534160	522
ENSMUSG00000009090	protein_coding	Ap1b1	ENSMUST00000133007	processed_transcript		11	1	5038764	818
ENSMUSG00000083910	processed_pseudogene	Gm13604	ENSMUST00000119332	processed_pseudogene		2	-1	67707771	482
ENSMUSG00000109813	protein_coding	Olfr1279	ENSMUST00000090329	protein_coding	principal2	2	1	111306201	942
ENSMUSG00000040913	protein_coding	Fbxw4	ENSMUST00000160003	protein_coding		19	-1	45591842	387
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000239437	retained_intron		11	1	116534740	1532
ENSMUSG00000108601	TEC	Gm44645	ENSMUST00000205492	TEC		7	1	73422250	1653
ENSMUSG00000107911	processed_pseudogene	Gm7565	ENSMUST00000203611	processed_pseudogene		14	1	26565766	623
ENSMUSG00000094736	unprocessed_pseudogene	Gm4073	ENSMUST00000176792	unprocessed_pseudogene		7	-1	8035143	3500
ENSMUSG00000009090	protein_coding	Ap1b1	ENSMUST00000133014	processed_transcript		11	1	4986934	563
ENSMUSG00000033715	protein_coding	Akr1c14	ENSMUST00000041768	protein_coding	principal1	13	1	4059591	2436
ENSMUSG00000040913	protein_coding	Fbxw4	ENSMUST00000161039	retained_intron		19	-1	45579890	509
ENSMUSG00000057522	protein_coding	Spop	ENSMUST00000107722	protein_coding	principal1	11	1	95414098	3063
ENSMUSG00000097585	processed_transcript	E230029C05Rik	ENSMUST00000207458	antisense		7	1	89980723	2445
ENSMUSG00000040913	protein_coding	Fbxw4	ENSMUST00000162879	protein_coding		19	-1	45591842	482
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000156663	retained_intron		17	-1	24901086	906
ENSMUSG00000096255	protein_coding	Dynlt1b	ENSMUST00000179569	protein_coding	principal1	17	1	6430112	771
ENSMUSG00000009090	protein_coding	Ap1b1	ENSMUST00000137292	processed_transcript		11	1	4986912	382
ENSMUSG00000085866	lincRNA	Gm15218	ENSMUST00000131006	lincRNA		14	1	45754689	618
ENSMUSG00000101150	lincRNA	Gm29405	ENSMUST00000187204	lincRNA		Y	1	56803398	370
ENSMUSG00000081840	processed_pseudogene	Gm15220	ENSMUST00000120730	processed_pseudogene		14	-1	45919465	379
ENSMUSG00000040913	protein_coding	Fbxw4	ENSMUST00000160438	protein_coding		19	-1	45592661	570
ENSMUSG00000084276	processed_pseudogene	Gm8317	ENSMUST00000121261	processed_pseudogene		14	-1	45858546	471
ENSMUSG00000097585	processed_transcript	E230029C05Rik	ENSMUST00000208028	lincRNA		7	1	89980755	2066
ENSMUSG00000115000	lincRNA	Gm49192	ENSMUST00000226359	lincRNA		14	-1	45991037	1585
ENSMUSG00000099595	lincRNA	Gm29406	ENSMUST00000186400	lincRNA		Y	-1	56942627	235
ENSMUSG00000040913	protein_coding	Fbxw4	ENSMUST00000161556	retained_intron		19	-1	45631139	609
ENSMUSG00000115382	processed_pseudogene	Gm46475	ENSMUST00000226223	processed_pseudogene		14	1	45925934	264
ENSMUSG00000041189	protein_coding	Chrnb1	ENSMUST00000045971	protein_coding	principal1	11	-1	69795943	2155
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000125648	retained_intron		17	-1	24901718	751
ENSMUSG00000044674	protein_coding	Fzd1	ENSMUST00000054294	protein_coding	principal1	5	-1	4758035	4197
ENSMUSG00000059179	processed_pseudogene	Gm8991	ENSMUST00000073014	processed_pseudogene		5	-1	16731070	1075
ENSMUSG00000061878	protein_coding	Sphk1	ENSMUST00000141798	protein_coding	principal4	11	1	116534740	1537
ENSMUSG00000056671	protein_coding	Prelid2	ENSMUST00000235606	protein_coding	principal1	18	-1	41951242	868
ENSMUSG00000040913	protein_coding	Fbxw4	ENSMUST00000159590	protein_coding		19	-1	45640803	630
ENSMUSG00000031839	protein_coding	Hsbp1	ENSMUST00000034300	protein_coding	principal1	8	1	119344488	1208
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000145357	retained_intron		17	-1	24903081	704
ENSMUSG00000041189	protein_coding	Chrnb1	ENSMUST00000154816	retained_intron		11	-1	69794270	740
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000133198	retained_intron		17	-1	24903364	549
ENSMUSG00000100779	antisense	Gm29292	ENSMUST00000186169	antisense		11	-1	116533077	766
ENSMUSG00000112652	antisense	4921516A02Rik	ENSMUST00000218544	antisense		10	1	78428271	4560
ENSMUSG00000009090	protein_coding	Ap1b1	ENSMUST00000009234	protein_coding	principal1	11	1	4986824	4085
ENSMUSG00000100539	unprocessed_pseudogene	Gm20913	ENSMUST00000189188	unprocessed_pseudogene		Y	-1	57017520	696
ENSMUSG00000041189	protein_coding	Chrnb1	ENSMUST00000129381	retained_intron		11	-1	69793820	486
ENSMUSG00000056671	protein_coding	Prelid2	ENSMUST00000070949	protein_coding		18	-1	41951194	651
ENSMUSG00000095573	protein_coding	H2al2b	ENSMUST00000168551	protein_coding	principal1	Y	-1	2720674	336
ENSMUSG00000031872	protein_coding	Bean1	ENSMUST00000093245	protein_coding	alternative2	8	1	104170513	3199
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000132258	retained_intron		17	-1	24905787	1055
ENSMUSG00000031839	protein_coding	Hsbp1	ENSMUST00000213037	retained_intron		8	1	119344516	711
ENSMUSG00000039579	protein_coding	Grin3a	ENSMUST00000093859	protein_coding		4	-1	49845549	7491
ENSMUSG00000097585	processed_transcript	E230029C05Rik	ENSMUST00000208362	antisense		7	1	90029159	2444
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000152486	retained_intron		17	-1	24906798	771
ENSMUSG00000056671	protein_coding	Prelid2	ENSMUST00000236542	retained_intron		18	-1	41951217	482
ENSMUSG00000041189	protein_coding	Chrnb1	ENSMUST00000147791	processed_transcript		11	-1	69795905	441
ENSMUSG00000031839	protein_coding	Hsbp1	ENSMUST00000212468	protein_coding	principal1	8	1	119344522	638
ENSMUSG00000101114	unprocessed_pseudogene	Gm28628	ENSMUST00000187006	unprocessed_pseudogene		Y	-1	2722099	264
ENSMUSG00000109903	protein_coding	Gm28710	ENSMUST00000211738	protein_coding	principal1	5	1	16791810	2987
ENSMUSG00000118266	processed_pseudogene	Gm18371	ENSMUST00000235276	processed_pseudogene		18	-1	41895313	735
ENSMUSG00000099854	lincRNA	Gm28710	ENSMUST00000186866	lincRNA		5	1	16835914	489
ENSMUSG00000086549	processed_transcript	Gm13648	ENSMUST00000138361	processed_transcript		4	-1	156059802	1536
ENSMUSG00000083431	processed_pseudogene	Gm13437	ENSMUST00000122434	processed_pseudogene		2	-1	37082455	1981
ENSMUSG00000039579	protein_coding	Grin3a	ENSMUST00000076674	protein_coding	principal1	4	-1	49845549	7431
ENSMUSG00000114161	lincRNA	Gm48662	ENSMUST00000220673	lincRNA		13	-1	31077845	4472
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000144336	processed_transcript		17	-1	24916567	748
ENSMUSG00000031839	protein_coding	Hsbp1	ENSMUST00000212795	processed_transcript		8	1	119345245	1145
ENSMUSG00000057522	protein_coding	Spop	ENSMUST00000107724	protein_coding	principal1	11	1	95414080	2881
ENSMUSG00000083921	processed_pseudogene	Gm15750	ENSMUST00000120970	processed_pseudogene		5	1	4764834	616
ENSMUSG00000100073	lincRNA	Gm29404	ENSMUST00000187914	lincRNA		Y	1	57033825	397
ENSMUSG00000118248	processed_pseudogene	Gm50279	ENSMUST00000235770	processed_pseudogene		19	-1	57529897	316
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000146706	protein_coding		17	-1	24923868	705
ENSMUSG00000007338	protein_coding	Mrpl49	ENSMUST00000007482	protein_coding	principal1	19	-1	6057785	1764
ENSMUSG00000100223	unprocessed_pseudogene	Gm29403	ENSMUST00000185491	unprocessed_pseudogene		Y	-1	57047152	615
ENSMUSG00000105560	lincRNA	Gm42744	ENSMUST00000196517	lincRNA		5	-1	4799094	2147
ENSMUSG00000026285	protein_coding	Pdcd1	ENSMUST00000027507	protein_coding	principal1	1	-1	94052553	1930
ENSMUSG00000039579	protein_coding	Grin3a	ENSMUST00000131797	processed_transcript		4	-1	49845744	3799
ENSMUSG00000118178	lincRNA	Gm32932	ENSMUST00000235179	lincRNA		19	1	57522257	1758
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000126280	retained_intron		17	-1	24924211	2943
ENSMUSG00000026005	protein_coding	Rpe	ENSMUST00000027157	protein_coding	principal1	1	1	66700831	2692
ENSMUSG00000057522	protein_coding	Spop	ENSMUST00000150884	protein_coding		11	1	95414095	470
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000148360	retained_intron		17	-1	24936945	1239
ENSMUSG00000086361	protein_coding	Gm6569	ENSMUST00000154520	protein_coding	principal1	15	1	73834561	811
ENSMUSG00000105706	processed_pseudogene	Gm42855	ENSMUST00000197388	processed_pseudogene		5	1	16981036	253
ENSMUSG00000115070	processed_pseudogene	Gm4740	ENSMUST00000227396	processed_pseudogene		15	1	38990234	1774
ENSMUSG00000006463	protein_coding	Zdhhc24	ENSMUST00000162088	processed_transcript		19	1	4878668	2269
ENSMUSG00000007338	protein_coding	Mrpl49	ENSMUST00000235520	protein_coding		19	-1	6057758	1311
ENSMUSG00000039579	protein_coding	Grin3a	ENSMUST00000149059	processed_transcript		4	-1	49719250	3925
ENSMUSG00000083380	processed_pseudogene	Ndufb4c	ENSMUST00000120938	processed_pseudogene		15	-1	73809896	390
ENSMUSG00000019850	protein_coding	Tnfaip3	ENSMUST00000019997	protein_coding	principal1	10	-1	19015410	4422
ENSMUSG00000100772	unprocessed_pseudogene	Gm28350	ENSMUST00000189453	unprocessed_pseudogene		Y	-1	57084035	696
ENSMUSG00000057522	protein_coding	Spop	ENSMUST00000127713	protein_coding		11	1	95414243	458
ENSMUSG00000031872	protein_coding	Bean1	ENSMUST00000212979	protein_coding	principal4	8	1	104170583	2131
ENSMUSG00000026012	protein_coding	Cd28	ENSMUST00000132833	processed_transcript		1	1	60716800	669
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000172523	retained_intron		17	1	34981862	1586
ENSMUSG00000007338	protein_coding	Mrpl49	ENSMUST00000236412	protein_coding		19	-1	6057079	421
ENSMUSG00000007338	protein_coding	Mrpl49	ENSMUST00000236833	processed_transcript		19	-1	6057745	146
ENSMUSG00000031872	protein_coding	Bean1	ENSMUST00000213077	protein_coding	alternative2	8	1	104170894	1373
ENSMUSG00000075378	protein_coding	Olfr361	ENSMUST00000216663	protein_coding	principal1	2	-1	37089225	2617
ENSMUSG00000057522	protein_coding	Spop	ENSMUST00000150922	processed_transcript		11	1	95474319	658
ENSMUSG00000026005	protein_coding	Rpe	ENSMUST00000113995	protein_coding		1	1	66700831	2713
ENSMUSG00000097585	processed_transcript	E230029C05Rik	ENSMUST00000208547	antisense		7	1	90029160	814
ENSMUSG00000113528	TEC	Gm32699	ENSMUST00000221728	TEC		13	1	17944291	1988
ENSMUSG00000075378	protein_coding	Olfr361	ENSMUST00000214969	protein_coding	principal1	2	-1	37089290	2749
ENSMUSG00000019850	protein_coding	Tnfaip3	ENSMUST00000105527	protein_coding	principal1	10	-1	19011963	4334
ENSMUSG00000113750	processed_pseudogene	Gm5628	ENSMUST00000222318	processed_pseudogene		13	1	17949908	1049
ENSMUSG00000102053	protein_coding	Gm4064	ENSMUST00000187482	protein_coding	principal1	Y	-1	2796205	1561
ENSMUSG00000075378	protein_coding	Olfr361	ENSMUST00000100145	protein_coding	principal1	2	-1	37085746	969
ENSMUSG00000117770	lincRNA	Gm50285	ENSMUST00000235373	lincRNA		19	-1	57544223	1339
ENSMUSG00000031872	protein_coding	Bean1	ENSMUST00000171018	protein_coding	principal4	8	1	104170513	3386
ENSMUSG00000117978	processed_pseudogene	Gm50286	ENSMUST00000237779	processed_pseudogene		19	1	57584761	196
ENSMUSG00000097585	processed_transcript	E230029C05Rik	ENSMUST00000208266	antisense		7	1	90029162	875
ENSMUSG00000099839	lincRNA	Gm29374	ENSMUST00000187198	lincRNA		1	-1	87146983	1340
ENSMUSG00000031023	protein_coding	Akip1	ENSMUST00000033335	protein_coding	principal1	7	1	109703690	1028
ENSMUSG00000019850	protein_coding	Tnfaip3	ENSMUST00000154590	retained_intron		10	-1	19015376	6199
ENSMUSG00000041035	protein_coding	Gm17018	ENSMUST00000047057	protein_coding	principal1	19	1	45560615	1353
ENSMUSG00000031872	protein_coding	Bean1	ENSMUST00000167633	protein_coding	alternative2	8	1	104170513	3275
ENSMUSG00000097585	processed_transcript	E230029C05Rik	ENSMUST00000181784	processed_transcript		7	1	89980749	1100
ENSMUSG00000019850	protein_coding	Tnfaip3	ENSMUST00000154749	retained_intron		10	-1	19008845	764
ENSMUSG00000019850	protein_coding	Tnfaip3	ENSMUST00000122863	protein_coding		10	-1	19015657	490
ENSMUSG00000028793	protein_coding	Rnf19b	ENSMUST00000152565	protein_coding		4	1	129058409	1463
ENSMUSG00000031023	protein_coding	Akip1	ENSMUST00000143581	protein_coding		7	1	109703752	645
ENSMUSG00000029003	protein_coding	Mad2l2	ENSMUST00000084129	protein_coding	principal1	4	1	148130915	1162
ENSMUSG00000019850	protein_coding	Tnfaip3	ENSMUST00000146388	protein_coding		10	-1	19014582	456
ENSMUSG00000031023	protein_coding	Akip1	ENSMUST00000147497	retained_intron		7	1	109708833	408
ENSMUSG00000029003	protein_coding	Mad2l2	ENSMUST00000132698	protein_coding		4	1	148140182	831
ENSMUSG00000100951	unprocessed_pseudogene	Gm29339	ENSMUST00000189613	unprocessed_pseudogene		Y	-1	84834025	696
ENSMUSG00000113568	processed_pseudogene	Gm46369	ENSMUST00000221577	processed_pseudogene		12	1	85255527	401
ENSMUSG00000041035	protein_coding	Gm17018	ENSMUST00000235805	nonsense_mediated_decay		19	1	45560635	687
ENSMUSG00000006463	protein_coding	Zdhhc24	ENSMUST00000006632	protein_coding	principal1	19	1	4878672	2558
ENSMUSG00000041035	protein_coding	Gm17018	ENSMUST00000237600	processed_transcript		19	1	45575174	321
ENSMUSG00000041035	protein_coding	Gm17018	ENSMUST00000235584	processed_transcript		19	1	45575464	757
ENSMUSG00000002812	protein_coding	Flii	ENSMUST00000002889	protein_coding	principal1	11	-1	60727263	4060
ENSMUSG00000019767	protein_coding	Ccdc170	ENSMUST00000138112	protein_coding	alternative2	10	1	4482502	3350
ENSMUSG00000041035	protein_coding	Gm17018	ENSMUST00000161373	processed_transcript		19	1	45578277	653
ENSMUSG00000026005	protein_coding	Rpe	ENSMUST00000142920	nonsense_mediated_decay		1	1	66700831	2724
ENSMUSG00000019767	protein_coding	Ccdc170	ENSMUST00000145465	protein_coding		10	1	4511543	570
ENSMUSG00000029003	protein_coding	Mad2l2	ENSMUST00000030860	protein_coding	principal1	4	1	148140182	1535
ENSMUSG00000066068	processed_pseudogene	Gm13611	ENSMUST00000118269	processed_pseudogene		2	1	32271845	318
ENSMUSG00000019767	protein_coding	Ccdc170	ENSMUST00000157064	processed_transcript		10	1	4532995	548
ENSMUSG00000006463	protein_coding	Zdhhc24	ENSMUST00000162134	processed_transcript		19	1	4878690	2314
ENSMUSG00000002812	protein_coding	Flii	ENSMUST00000154465	retained_intron		11	-1	60720141	782
ENSMUSG00000026005	protein_coding	Rpe	ENSMUST00000190404	nonsense_mediated_decay		1	1	66700907	759
ENSMUSG00000019767	protein_coding	Ccdc170	ENSMUST00000019901	protein_coding	principal2	10	1	4509872	2151
ENSMUSG00000061937	protein_coding	Csn1s2a	ENSMUST00000200322	protein_coding	alternative2	5	1	87774567	797
ENSMUSG00000103382	TEC	Gm37755	ENSMUST00000195880	TEC		1	1	66812315	2179
ENSMUSG00000002812	protein_coding	Flii	ENSMUST00000137226	retained_intron		11	-1	60727223	706
ENSMUSG00000029003	protein_coding	Mad2l2	ENSMUST00000140049	protein_coding		4	1	148140724	391
ENSMUSG00000100700	processed_pseudogene	Gm6137	ENSMUST00000187552	processed_pseudogene		Y	-1	2806692	578
ENSMUSG00000020264	protein_coding	Slc36a2	ENSMUST00000039305	protein_coding	principal1	11	-1	55185077	2429
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000184120	nonsense_mediated_decay		5	-1	9161752	3926
ENSMUSG00000006463	protein_coding	Zdhhc24	ENSMUST00000162720	nonsense_mediated_decay		19	1	4878704	2523
ENSMUSG00000020327	protein_coding	Fgf22	ENSMUST00000219981	protein_coding		10	1	79755076	1070
ENSMUSG00000029003	protein_coding	Mad2l2	ENSMUST00000105707	protein_coding		4	1	148140743	949
ENSMUSG00000112330	processed_pseudogene	Gm3266	ENSMUST00000217832	processed_pseudogene		10	-1	4570223	591
ENSMUSG00000006463	protein_coding	Zdhhc24	ENSMUST00000160014	nonsense_mediated_decay		19	1	4878723	871
ENSMUSG00000101066	processed_pseudogene	Gm8498	ENSMUST00000188227	processed_pseudogene		Y	1	2825380	974
ENSMUSG00000029003	protein_coding	Mad2l2	ENSMUST00000148742	retained_intron		4	1	148140762	667
ENSMUSG00000026012	protein_coding	Cd28	ENSMUST00000027165	protein_coding	principal1	1	1	60746358	4347
ENSMUSG00000028793	protein_coding	Rnf19b	ENSMUST00000097874	protein_coding		4	1	129058814	1992
ENSMUSG00000020327	protein_coding	Fgf22	ENSMUST00000219228	protein_coding	principal1	10	1	79755076	2167
ENSMUSG00000029003	protein_coding	Mad2l2	ENSMUST00000105708	retained_intron		4	1	148144790	487
ENSMUSG00000054452	protein_coding	Tle5	ENSMUST00000220368	retained_intron		10	1	81559488	523
ENSMUSG00000006463	protein_coding	Zdhhc24	ENSMUST00000162754	retained_intron		19	1	4879767	939
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000115229	protein_coding	alternative2	17	-1	24936977	5603
ENSMUSG00000026012	protein_coding	Cd28	ENSMUST00000153207	retained_intron		1	1	60746402	1775
ENSMUSG00000028793	protein_coding	Rnf19b	ENSMUST00000130803	protein_coding		4	1	129078971	815
ENSMUSG00000024163	protein_coding	Mapk8ip3	ENSMUST00000178969	protein_coding	alternative2	17	-1	24936977	5579
ENSMUSG00000020327	protein_coding	Fgf22	ENSMUST00000020577	protein_coding		10	1	79755137	664
ENSMUSG00000111983	processed_pseudogene	Gm48666	ENSMUST00000219929	processed_pseudogene		10	-1	11330415	279
ENSMUSG00000110470	lincRNA	Gm45723	ENSMUST00000212135	lincRNA		8	1	119378696	1783
ENSMUSG00000032788	protein_coding	Pdxk	ENSMUST00000041616	protein_coding	principal1	10	-1	78464975	5124
ENSMUSG00000020264	protein_coding	Slc36a2	ENSMUST00000125560	processed_transcript		11	-1	55185077	1772
ENSMUSG00000112012	TEC	Gm47025	ENSMUST00000220420	TEC		10	-1	102432338	431
ENSMUSG00000028793	protein_coding	Rnf19b	ENSMUST00000147238	processed_transcript		4	1	129083885	672
ENSMUSG00000111931	TEC	Gm47032	ENSMUST00000218558	TEC		10	1	101730775	787
ENSMUSG00000112342	sense_intronic	Gm47031	ENSMUST00000219521	sense_intronic		10	1	102319613	2282
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000184888	nonsense_mediated_decay		5	-1	9161759	3892
ENSMUSG00000084980	antisense	Slc36a1os	ENSMUST00000157010	antisense		11	-1	55197682	1790
ENSMUSG00000032788	protein_coding	Pdxk	ENSMUST00000218245	retained_intron		10	-1	78448246	405
ENSMUSG00000061937	protein_coding	Csn1s2a	ENSMUST00000076379	protein_coding	principal3	5	1	87774567	920
ENSMUSG00000084980	antisense	Slc36a1os	ENSMUST00000142953	antisense		11	-1	55197864	297
ENSMUSG00000028793	protein_coding	Rnf19b	ENSMUST00000168461	protein_coding	principal2	4	1	129058271	2532
ENSMUSG00000111990	lincRNA	Gm47033	ENSMUST00000218629	lincRNA		10	1	102415883	2132
ENSMUSG00000031022	protein_coding	BC051019	ENSMUST00000106735	protein_coding	principal1	7	-1	109723786	1957
ENSMUSG00000071633	protein_coding	Gm4952	ENSMUST00000181868	protein_coding		19	1	12599974	782
ENSMUSG00000061937	protein_coding	Csn1s2a	ENSMUST00000196749	protein_coding	alternative2	5	1	87774567	917
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000184401	nonsense_mediated_decay		5	-1	9153148	5057
ENSMUSG00000028793	protein_coding	Rnf19b	ENSMUST00000030584	protein_coding	alternative2	4	1	129058271	2414
ENSMUSG00000061937	protein_coding	Csn1s2a	ENSMUST00000196585	protein_coding	alternative2	5	1	87774581	762
ENSMUSG00000021118	protein_coding	Plek2	ENSMUST00000021544	protein_coding	principal1	12	-1	78906964	1583
ENSMUSG00000031022	protein_coding	BC051019	ENSMUST00000033334	protein_coding	principal1	7	-1	109723850	1626
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000184620	nonsense_mediated_decay		5	-1	9161743	3843
ENSMUSG00000071633	protein_coding	Gm4952	ENSMUST00000092931	protein_coding	principal1	19	1	12600016	2212
ENSMUSG00000114886	processed_pseudogene	Gm48432	ENSMUST00000223945	processed_pseudogene		13	1	58218719	558
ENSMUSG00000109430	TEC	Gm44585	ENSMUST00000207150	TEC		7	1	6805851	607
ENSMUSG00000108698	processed_pseudogene	Gm44964	ENSMUST00000207011	processed_pseudogene		7	1	26292378	376
ENSMUSG00000109094	TEC	Gm44587	ENSMUST00000207399	TEC		7	1	6900352	1685
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000183448	nonsense_mediated_decay		5	-1	9161671	3921
ENSMUSG00000109082	TEC	Gm44586	ENSMUST00000207166	TEC		7	1	6891038	2737
ENSMUSG00000031022	protein_coding	BC051019	ENSMUST00000145211	protein_coding		7	-1	109721016	606
ENSMUSG00000109131	TEC	Gm44862	ENSMUST00000207981	TEC		7	1	6742646	1055
ENSMUSG00000109456	TEC	Gm44584	ENSMUST00000208395	TEC		7	1	6809001	2880
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000183347	retained_intron		5	-1	9120731	728
ENSMUSG00000108431	antisense	Gm42375	ENSMUST00000206226	antisense		7	-1	26307286	745
ENSMUSG00000061937	protein_coding	Csn1s2a	ENSMUST00000200210	retained_intron		5	1	87774582	715
ENSMUSG00000109176	transcribed_unprocessed_pseudogene	Zfp264	ENSMUST00000208781	processed_transcript		7	1	6977246	2801
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000146230	retained_intron		10	1	101681487	1993
ENSMUSG00000109176	transcribed_unprocessed_pseudogene	Zfp264	ENSMUST00000208656	transcribed_unprocessed_pseudogene		7	1	6981203	1563
ENSMUSG00000061937	protein_coding	Csn1s2a	ENSMUST00000197019	retained_intron		5	1	87775784	742
ENSMUSG00000095852	protein_coding	Gm10256	ENSMUST00000189964	protein_coding	principal1	Y	1	2862139	1573
ENSMUSG00000061937	protein_coding	Csn1s2a	ENSMUST00000197544	retained_intron		5	1	87777463	497
ENSMUSG00000109416	TEC	Gm44863	ENSMUST00000207613	TEC		7	1	6753043	1422
ENSMUSG00000029005	protein_coding	Draxin	ENSMUST00000030862	protein_coding	principal1	4	-1	148130698	5200
ENSMUSG00000035890	protein_coding	Rnf126	ENSMUST00000047203	protein_coding	principal1	10	-1	79766952	1639
ENSMUSG00000095852	protein_coding	Gm10256	ENSMUST00000188114	protein_coding	principal1	Y	1	2862158	1708
ENSMUSG00000061937	protein_coding	Csn1s2a	ENSMUST00000200200	retained_intron		5	1	87779606	589
ENSMUSG00000072487	protein_coding	Mroh5	ENSMUST00000238402	protein_coding	alternative2	15	-1	73830983	4040
ENSMUSG00000051527	protein_coding	Usp29	ENSMUST00000208195	retained_intron		7	1	6730578	2660
ENSMUSG00000095852	protein_coding	Gm10256	ENSMUST00000179404	protein_coding	principal1	Y	1	2830699	1358
ENSMUSG00000005951	protein_coding	Shpk	ENSMUST00000131927	nonsense_mediated_decay		11	1	73199460	2856
ENSMUSG00000072487	protein_coding	Mroh5	ENSMUST00000151999	nonsense_mediated_decay		15	-1	73830983	3642
ENSMUSG00000100145	processed_pseudogene	Gm8502	ENSMUST00000185708	processed_pseudogene		Y	1	2856974	901
ENSMUSG00000061937	protein_coding	Csn1s2a	ENSMUST00000199200	retained_intron		5	1	87781856	1205
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000183973	protein_coding		5	-1	9161701	2408
ENSMUSG00000061937	protein_coding	Csn1s2a	ENSMUST00000200350	retained_intron		5	1	87785160	661
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000184370	nonsense_mediated_decay		5	-1	9126577	813
ENSMUSG00000035890	protein_coding	Rnf126	ENSMUST00000218770	processed_transcript		10	-1	79766941	1408
ENSMUSG00000035890	protein_coding	Rnf126	ENSMUST00000219189	retained_intron		10	-1	79766910	773
ENSMUSG00000041809	protein_coding	Efhc1	ENSMUST00000160782	processed_transcript		1	1	20951626	357
ENSMUSG00000108599	TEC	Gm10616	ENSMUST00000205285	TEC		7	1	79466409	2127
ENSMUSG00000072487	protein_coding	Mroh5	ENSMUST00000071419	protein_coding	principal2	15	-1	73839671	2766
ENSMUSG00000110638	TEC	Gm45887	ENSMUST00000212672	TEC		8	1	104220612	2998
ENSMUSG00000110551	processed_pseudogene	Gm45750	ENSMUST00000211966	processed_pseudogene		8	1	104223747	354
ENSMUSG00000060843	protein_coding	Ctnna3	ENSMUST00000105441	protein_coding	principal1	10	1	63430098	2907
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000067150	protein_coding	principal4	5	1	33721724	4218
ENSMUSG00000072487	protein_coding	Mroh5	ENSMUST00000136698	retained_intron		15	-1	73839699	2618
ENSMUSG00000103831	TEC	Gm37608	ENSMUST00000195696	TEC		7	1	79516882	1880
ENSMUSG00000060843	protein_coding	Ctnna3	ENSMUST00000105440	protein_coding	principal1	10	1	63457510	3682
ENSMUSG00000097023	lincRNA	Mir9-3hg	ENSMUST00000182495	lincRNA		7	1	79500026	343
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000164207	protein_coding	alternative2	5	1	33721791	4150
ENSMUSG00000007646	protein_coding	Rad51c	ENSMUST00000067692	protein_coding	principal3	11	-1	87404523	3944
ENSMUSG00000072487	protein_coding	Mroh5	ENSMUST00000110021	protein_coding	alternative2	15	-1	73819410	2145
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000087820	protein_coding	alternative2	5	1	33721798	2630
ENSMUSG00000060843	protein_coding	Ctnna3	ENSMUST00000133190	processed_transcript		10	1	63574506	2795
ENSMUSG00000104028	processed_pseudogene	Gm5851	ENSMUST00000194132	processed_pseudogene		3	-1	92263474	1204
ENSMUSG00000007646	protein_coding	Rad51c	ENSMUST00000153073	nonsense_mediated_decay		11	-1	87404506	2061
ENSMUSG00000097023	lincRNA	Mir9-3hg	ENSMUST00000183043	lincRNA		7	1	79500038	643
ENSMUSG00000019779	protein_coding	Frk	ENSMUST00000019913	protein_coding	principal1	10	1	34483399	4696
ENSMUSG00000103385	TEC	Gm37752	ENSMUST00000193494	TEC		3	-1	92281033	3309
ENSMUSG00000026458	protein_coding	Ppfia4	ENSMUST00000168515	protein_coding	principal2	1	-1	134332928	6067
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000202182	protein_coding		5	1	33722444	648
ENSMUSG00000074254	protein_coding	Cyp2a4	ENSMUST00000098657	protein_coding	principal1	7	1	26307169	1738
ENSMUSG00000060843	protein_coding	Ctnna3	ENSMUST00000135474	processed_transcript		10	1	63821055	992
ENSMUSG00000007646	protein_coding	Rad51c	ENSMUST00000007790	protein_coding	alternative2	11	-1	87404954	1632
ENSMUSG00000060843	protein_coding	Ctnna3	ENSMUST00000075099	protein_coding	principal1	10	1	63504037	2688
ENSMUSG00000026458	protein_coding	Ppfia4	ENSMUST00000186730	protein_coding		1	-1	134327266	4674
ENSMUSG00000005951	protein_coding	Shpk	ENSMUST00000006105	protein_coding	principal1	11	1	73199460	2808
ENSMUSG00000030346	protein_coding	Rad51ap1	ENSMUST00000112220	protein_coding	alternative2	6	-1	126939587	2233
ENSMUSG00000051527	protein_coding	Usp29	ENSMUST00000200535	protein_coding	principal1	7	1	6730583	7540
ENSMUSG00000019779	protein_coding	Frk	ENSMUST00000215144	processed_transcript		10	1	34483461	350
ENSMUSG00000049620	protein_coding	Prss33	ENSMUST00000059906	protein_coding	principal1	17	-1	23835743	1373
ENSMUSG00000074445	protein_coding	Sprr2a3	ENSMUST00000193337	protein_coding	principal1	3	1	92285417	2880
ENSMUSG00000062561	TEC	Gm10118	ENSMUST00000079279	TEC		10	-1	63927434	2569
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000184903	processed_transcript		5	-1	9161743	1950
ENSMUSG00000097023	lincRNA	Mir9-3hg	ENSMUST00000181511	lincRNA		7	1	79500117	3412
ENSMUSG00000007646	protein_coding	Rad51c	ENSMUST00000129400	nonsense_mediated_decay		11	-1	87404423	938
ENSMUSG00000074445	protein_coding	Sprr2a3	ENSMUST00000090872	protein_coding	principal1	3	1	92288566	682
ENSMUSG00000030346	protein_coding	Rad51ap1	ENSMUST00000201102	retained_intron		6	-1	126925829	1838
ENSMUSG00000097023	lincRNA	Mir9-3hg	ENSMUST00000182937	lincRNA		7	1	79500121	636
ENSMUSG00000083248	processed_pseudogene	Gm6574	ENSMUST00000120037	processed_pseudogene		7	-1	104529095	362
ENSMUSG00000051527	protein_coding	Usp29	ENSMUST00000197117	protein_coding		7	1	6730741	1853
ENSMUSG00000019779	protein_coding	Frk	ENSMUST00000170771	protein_coding	principal1	10	1	34483520	3406
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000184947	retained_intron		5	-1	9161737	3089
ENSMUSG00000054452	protein_coding	Tle5	ENSMUST00000002518	protein_coding	principal1	10	1	81559494	1411
ENSMUSG00000051527	protein_coding	Usp29	ENSMUST00000208662	processed_transcript		7	1	6730855	2232
ENSMUSG00000049620	protein_coding	Prss33	ENSMUST00000115444	nonsense_mediated_decay		17	-1	23835739	1076
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000184372	protein_coding		5	-1	9161716	809
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000183525	protein_coding		5	-1	9152045	830
ENSMUSG00000097023	lincRNA	Mir9-3hg	ENSMUST00000180881	lincRNA		7	1	79515232	1847
ENSMUSG00000022780	protein_coding	Meltf	ENSMUST00000023464	protein_coding	principal1	16	1	31878810	4133
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000183792	retained_intron		5	-1	9161734	1145
ENSMUSG00000097023	lincRNA	Mir9-3hg	ENSMUST00000182317	lincRNA		7	1	79515435	479
ENSMUSG00000049620	protein_coding	Prss33	ENSMUST00000164140	retained_intron		17	-1	23836056	870
ENSMUSG00000051527	protein_coding	Usp29	ENSMUST00000207899	processed_transcript		7	1	6730945	4348
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000134610	retained_intron		5	1	33722820	3316
ENSMUSG00000112165	processed_pseudogene	Gm48851	ENSMUST00000218334	processed_pseudogene		10	-1	111102871	590
ENSMUSG00000021245	protein_coding	Mlh3	ENSMUST00000223230	nonsense_mediated_decay		12	-1	85266284	2052
ENSMUSG00000097023	lincRNA	Mir9-3hg	ENSMUST00000182125	lincRNA		7	1	79527850	1062
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000185193	retained_intron		5	-1	9161749	3029
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000155002	protein_coding		5	1	33723772	650
ENSMUSG00000051527	protein_coding	Usp29	ENSMUST00000208952	processed_transcript		7	1	6731200	447
ENSMUSG00000030346	protein_coding	Rad51ap1	ENSMUST00000112221	protein_coding	principal3	6	-1	126939587	1871
ENSMUSG00000051527	protein_coding	Usp29	ENSMUST00000208642	retained_intron		7	1	6735696	2610
ENSMUSG00000103663	TEC	2900037B21Rik	ENSMUST00000194352	TEC		7	1	79512924	337
ENSMUSG00000042508	protein_coding	Dmtf1	ENSMUST00000185100	protein_coding		5	-1	9152938	242
ENSMUSG00000021098	protein_coding	4930447C04Rik	ENSMUST00000044000	protein_coding	principal2	12	-1	72917906	2051
ENSMUSG00000019779	protein_coding	Frk	ENSMUST00000215594	retained_intron		10	1	34483532	2038
ENSMUSG00000015488	protein_coding	Cacfd1	ENSMUST00000114005	protein_coding		2	1	27009926	1286
ENSMUSG00000091086	processed_pseudogene	Rpl6l	ENSMUST00000171120	processed_pseudogene		10	1	111125851	871
ENSMUSG00000051527	protein_coding	Usp29	ENSMUST00000198068	protein_coding	principal1	7	1	6947602	4420
ENSMUSG00000102995	TEC	A330074H02Rik	ENSMUST00000194667	TEC		7	1	79510362	1039
ENSMUSG00000051527	protein_coding	Usp29	ENSMUST00000054055	protein_coding	principal1	7	1	6961160	2610
ENSMUSG00000111968	processed_pseudogene	Gm8873	ENSMUST00000217847	processed_pseudogene		10	1	111156216	1439
ENSMUSG00000042846	protein_coding	Lrrtm3	ENSMUST00000105439	protein_coding	principal1	10	-1	64090274	3896
ENSMUSG00000050541	protein_coding	Adra1b	ENSMUST00000067258	protein_coding	principal1	11	-1	43901210	3331
ENSMUSG00000041809	protein_coding	Efhc1	ENSMUST00000038447	protein_coding	principal1	1	1	20951688	2146
ENSMUSG00000101311	lincRNA	Gm28250	ENSMUST00000187025	lincRNA		Y	1	27103779	2168
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000181298	protein_coding		5	1	33729738	601
ENSMUSG00000081774	processed_pseudogene	Gm13866	ENSMUST00000118901	processed_pseudogene		2	-1	102210379	968
ENSMUSG00000030346	protein_coding	Rad51ap1	ENSMUST00000201760	processed_transcript		6	-1	126925735	496
ENSMUSG00000050541	protein_coding	Adra1b	ENSMUST00000139906	protein_coding		11	-1	43901210	1764
ENSMUSG00000100803	unprocessed_pseudogene	Gm28251	ENSMUST00000188835	unprocessed_pseudogene		Y	1	27112987	695
ENSMUSG00000036921	protein_coding	Tex46	ENSMUST00000046647	protein_coding	principal1	4	1	136610437	683
ENSMUSG00000042846	protein_coding	Lrrtm3	ENSMUST00000131945	processed_transcript		10	-1	64090277	545
ENSMUSG00000100873	unprocessed_pseudogene	Gm28243	ENSMUST00000187801	unprocessed_pseudogene		Y	1	27149813	615
ENSMUSG00000050541	protein_coding	Adra1b	ENSMUST00000124306	processed_transcript		11	-1	43836332	3047
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000132724	retained_intron		5	1	33729964	737
ENSMUSG00000030346	protein_coding	Rad51ap1	ENSMUST00000202191	retained_intron		6	-1	126928270	518
ENSMUSG00000108043	antisense	Zim3	ENSMUST00000203365	antisense		7	-1	6976663	3226
ENSMUSG00000015488	protein_coding	Cacfd1	ENSMUST00000114004	protein_coding		2	1	27009926	2194
ENSMUSG00000042846	protein_coding	Lrrtm3	ENSMUST00000148712	retained_intron		10	-1	64090247	2425
ENSMUSG00000021552	protein_coding	Gkap1	ENSMUST00000091579	protein_coding	principal1	13	-1	58274188	1523
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000201295	protein_coding		5	1	33730221	668
ENSMUSG00000021098	protein_coding	4930447C04Rik	ENSMUST00000143960	nonsense_mediated_decay		12	-1	72906277	503
ENSMUSG00000108043	antisense	Zim3	ENSMUST00000204486	antisense		7	-1	6975464	647
ENSMUSG00000042846	protein_coding	Lrrtm3	ENSMUST00000133588	processed_transcript		10	-1	64090250	469
ENSMUSG00000050541	protein_coding	Adra1b	ENSMUST00000167574	protein_coding	principal1	11	-1	43836332	3047
ENSMUSG00000030346	protein_coding	Rad51ap1	ENSMUST00000144954	protein_coding		6	-1	126939571	599
ENSMUSG00000114940	processed_pseudogene	Gm21378	ENSMUST00000178830	processed_pseudogene		13	-1	120100332	1246
ENSMUSG00000101692	lincRNA	Gm28244	ENSMUST00000189342	lincRNA		Y	-1	27163118	356
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000202791	protein_coding		5	1	33733252	780
ENSMUSG00000021552	protein_coding	Gkap1	ENSMUST00000225098	protein_coding		13	-1	58243951	627
ENSMUSG00000030346	protein_coding	Rad51ap1	ENSMUST00000123837	retained_intron		6	-1	126928108	711
ENSMUSG00000054452	protein_coding	Tle5	ENSMUST00000219870	retained_intron		10	1	81561044	1410
ENSMUSG00000108043	antisense	Zim3	ENSMUST00000203351	antisense		7	-1	6977420	556
ENSMUSG00000100464	unprocessed_pseudogene	Gm21771	ENSMUST00000188693	unprocessed_pseudogene		Y	1	27179288	696
ENSMUSG00000054452	protein_coding	Tle5	ENSMUST00000220348	nonsense_mediated_decay		10	1	81561218	381
ENSMUSG00000082727	processed_pseudogene	Gm13260	ENSMUST00000117797	processed_pseudogene		2	-1	11608696	1264
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000152661	retained_intron		5	1	33733692	732
ENSMUSG00000028294	protein_coding	Cfap206	ENSMUST00000029971	protein_coding	principal1	4	-1	34730206	2246
ENSMUSG00000099513	unprocessed_pseudogene	Gm29119	ENSMUST00000189973	unprocessed_pseudogene		Y	-1	50696713	696
ENSMUSG00000054452	protein_coding	Tle5	ENSMUST00000218611	retained_intron		10	1	81561278	125
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000142860	retained_intron		5	1	33734605	641
ENSMUSG00000087172	lincRNA	Gm12153	ENSMUST00000148504	lincRNA		11	1	43959089	2509
ENSMUSG00000028294	protein_coding	Cfap206	ENSMUST00000135563	processed_transcript		4	-1	34719609	690
ENSMUSG00000096265	protein_coding	4930467E23Rik	ENSMUST00000098909	protein_coding	principal1	8	1	19729576	2514
ENSMUSG00000086738	lincRNA	Gm12154	ENSMUST00000145584	lincRNA		11	-1	44267209	445
ENSMUSG00000021552	protein_coding	Gkap1	ENSMUST00000224273	retained_intron		13	-1	58263978	817
ENSMUSG00000054452	protein_coding	Tle5	ENSMUST00000218690	retained_intron		10	1	81563622	2123
ENSMUSG00000024114	protein_coding	Prss41	ENSMUST00000122936	processed_transcript		17	-1	23844155	1088
ENSMUSG00000079701	protein_coding	Ssxb3	ENSMUST00000089374	protein_coding	principal1	X	-1	8591816	824
ENSMUSG00000073929	transcribed_unprocessed_pseudogene	Trim30e-ps1	ENSMUST00000147064	processed_transcript		7	-1	104535361	1890
ENSMUSG00000021098	protein_coding	4930447C04Rik	ENSMUST00000132901	retained_intron		12	-1	72906473	790
ENSMUSG00000054452	protein_coding	Tle5	ENSMUST00000218574	retained_intron		10	1	81564539	605
ENSMUSG00000021098	protein_coding	4930447C04Rik	ENSMUST00000132016	processed_transcript		12	-1	72906271	466
ENSMUSG00000021552	protein_coding	Gkap1	ENSMUST00000224114	retained_intron		13	-1	58264734	3742
ENSMUSG00000031668	protein_coding	Eif2ak3	ENSMUST00000034093	protein_coding	principal1	6	1	70844515	4513
ENSMUSG00000028294	protein_coding	Cfap206	ENSMUST00000108136	protein_coding		4	-1	34730178	1688
ENSMUSG00000030346	protein_coding	Rad51ap1	ENSMUST00000202835	processed_transcript		6	-1	126939546	471
ENSMUSG00000090242	processed_pseudogene	Rpl17-ps11	ENSMUST00000161946	processed_pseudogene		10	-1	11387603	729
ENSMUSG00000084175	processed_pseudogene	Gm11372	ENSMUST00000117348	processed_pseudogene		13	1	31199086	570
ENSMUSG00000054452	protein_coding	Tle5	ENSMUST00000220282	retained_intron		10	1	81564559	639
ENSMUSG00000073929	transcribed_unprocessed_pseudogene	Trim30e-ps1	ENSMUST00000151294	transcribed_unprocessed_pseudogene		7	-1	104534851	731
ENSMUSG00000079701	protein_coding	Ssxb3	ENSMUST00000089379	protein_coding	principal1	X	-1	8589246	604
ENSMUSG00000063447	protein_coding	Ube2d2b	ENSMUST00000072578	protein_coding	principal1	5	1	107830099	1678
ENSMUSG00000054452	protein_coding	Tle5	ENSMUST00000217807	retained_intron		10	1	81564605	747
ENSMUSG00000110669	processed_pseudogene	Gm10060	ENSMUST00000212002	processed_pseudogene		8	1	19784746	111
ENSMUSG00000030346	protein_coding	Rad51ap1	ENSMUST00000202897	nonsense_mediated_decay		6	-1	126939575	512
ENSMUSG00000021552	protein_coding	Gkap1	ENSMUST00000224505	protein_coding		13	-1	58274113	514
ENSMUSG00000031668	protein_coding	Eif2ak3	ENSMUST00000162950	protein_coding		6	1	70844553	927
ENSMUSG00000026458	protein_coding	Ppfia4	ENSMUST00000186964	processed_transcript		1	-1	134304846	2955
ENSMUSG00000054452	protein_coding	Tle5	ENSMUST00000218432	retained_intron		10	1	81565262	688
ENSMUSG00000021552	protein_coding	Gkap1	ENSMUST00000225034	protein_coding		13	-1	58274840	447
ENSMUSG00000083169	processed_pseudogene	Gm6580	ENSMUST00000117504	processed_pseudogene		14	1	46027428	1357
ENSMUSG00000028294	protein_coding	Cfap206	ENSMUST00000162495	nonsense_mediated_decay		4	-1	34730195	628
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000113334	protein_coding	principal3	2	1	32352327	2871
ENSMUSG00000026458	protein_coding	Ppfia4	ENSMUST00000189862	retained_intron		1	-1	134304808	2985
ENSMUSG00000021098	protein_coding	4930447C04Rik	ENSMUST00000131033	nonsense_mediated_decay		12	-1	72917857	1939
ENSMUSG00000031668	protein_coding	Eif2ak3	ENSMUST00000199251	retained_intron		6	1	70844556	1064
ENSMUSG00000080897	unprocessed_pseudogene	Gm14500	ENSMUST00000121647	unprocessed_pseudogene		X	1	8604420	113
ENSMUSG00000087460	lincRNA	4930401O12Rik	ENSMUST00000153175	lincRNA		13	-1	31241086	841
ENSMUSG00000030346	protein_coding	Rad51ap1	ENSMUST00000141212	retained_intron		6	-1	126939587	1711
ENSMUSG00000114798	processed_pseudogene	Gm20769	ENSMUST00000224202	processed_pseudogene		13	1	120149379	330
ENSMUSG00000026458	protein_coding	Ppfia4	ENSMUST00000189361	protein_coding	alternative2	1	-1	134332928	5238
ENSMUSG00000028294	protein_coding	Cfap206	ENSMUST00000137514	protein_coding		4	-1	34730195	765
ENSMUSG00000021552	protein_coding	Gkap1	ENSMUST00000223811	protein_coding		13	-1	58275699	445
ENSMUSG00000106878	processed_pseudogene	Gm17808	ENSMUST00000200859	processed_pseudogene		6	1	126931688	894
ENSMUSG00000081410	unprocessed_pseudogene	Gm6797	ENSMUST00000119440	unprocessed_pseudogene		X	1	8639622	512
ENSMUSG00000026458	protein_coding	Ppfia4	ENSMUST00000186553	retained_intron		1	-1	134311598	1215
ENSMUSG00000096323	protein_coding	Gm20767	ENSMUST00000225683	protein_coding	principal1	13	1	120140246	1427
ENSMUSG00000102763	TEC	Gm37257	ENSMUST00000194871	TEC		14	-1	46061149	717
ENSMUSG00000082496	processed_pseudogene	Gm6798	ENSMUST00000119961	processed_pseudogene		X	1	8654465	360
ENSMUSG00000110060	TEC	Gm9860	ENSMUST00000211426	TEC		7	1	46204549	3653
ENSMUSG00000028294	protein_coding	Cfap206	ENSMUST00000160209	processed_transcript		4	-1	34730195	557
ENSMUSG00000096323	protein_coding	Gm20767	ENSMUST00000179071	protein_coding	principal1	13	1	120154627	510
ENSMUSG00000044285	transcribed_processed_pseudogene	Ubb-ps	ENSMUST00000227415	processed_transcript		14	1	46084028	750
ENSMUSG00000044285	transcribed_processed_pseudogene	Ubb-ps	ENSMUST00000111388	transcribed_processed_pseudogene		14	1	46084128	685
ENSMUSG00000101068	processed_pseudogene	Gm28759	ENSMUST00000187621	processed_pseudogene		Y	-1	84870724	315
ENSMUSG00000014747	protein_coding	Ankrd53	ENSMUST00000014891	protein_coding	principal1	6	1	83762644	1739
ENSMUSG00000031668	protein_coding	Eif2ak3	ENSMUST00000159401	retained_intron		6	1	70878561	2625
ENSMUSG00000103115	lincRNA	Gm37584	ENSMUST00000193595	lincRNA		3	-1	88527355	1290
ENSMUSG00000055493	protein_coding	Epm2a	ENSMUST00000069106	protein_coding	principal1	10	1	11343404	3287
ENSMUSG00000101405	lincRNA	Gm28758	ENSMUST00000186123	lincRNA		Y	-1	84875484	2167
ENSMUSG00000114929	antisense	Gm48441	ENSMUST00000224942	antisense		13	1	58232143	474
ENSMUSG00000031668	protein_coding	Eif2ak3	ENSMUST00000161316	retained_intron		6	1	70896764	347
ENSMUSG00000110591	protein_coding	Gm31371	ENSMUST00000211848	protein_coding	principal1	8	1	19903392	2088
ENSMUSG00000014747	protein_coding	Ankrd53	ENSMUST00000206496	protein_coding		6	1	83762686	1243
ENSMUSG00000094658	protein_coding	Rbmy	ENSMUST00000171534	protein_coding	principal1	Y	1	2830680	1573
ENSMUSG00000105776	TEC	Gm43292	ENSMUST00000199580	TEC		6	-1	70885802	2449
ENSMUSG00000055493	protein_coding	Epm2a	ENSMUST00000161438	processed_transcript		10	1	11343453	373
ENSMUSG00000092451	unprocessed_pseudogene	Vmn2r-ps56	ENSMUST00000174814	unprocessed_pseudogene		7	-1	41772910	2596
ENSMUSG00000101552	unprocessed_pseudogene	Gm29118	ENSMUST00000186908	unprocessed_pseudogene		Y	-1	50733326	315
ENSMUSG00000021098	protein_coding	4930447C04Rik	ENSMUST00000136075	protein_coding		12	-1	72940774	1970
ENSMUSG00000050092	protein_coding	Sprr2b	ENSMUST00000061038	protein_coding	principal1	3	1	92316620	784
ENSMUSG00000015488	protein_coding	Cacfd1	ENSMUST00000114006	protein_coding	principal1	2	1	27009926	1648
ENSMUSG00000021098	protein_coding	4930447C04Rik	ENSMUST00000130635	protein_coding		12	-1	72937977	640
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000004683	protein_coding	principal1	8	1	3500457	2065
ENSMUSG00000082458	processed_pseudogene	Gm9430	ENSMUST00000121232	processed_pseudogene		X	-1	8663828	1527
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000125769	processed_transcript		2	1	32363010	429
ENSMUSG00000094658	protein_coding	Rbmy	ENSMUST00000100360	protein_coding	principal1	Y	1	2830699	1708
ENSMUSG00000097169	TEC	Gm26661	ENSMUST00000238635	TEC		14	1	7791455	590
ENSMUSG00000029074	protein_coding	Ttll10	ENSMUST00000051509	protein_coding	principal2	4	-1	156050817	2304
ENSMUSG00000021098	protein_coding	4930447C04Rik	ENSMUST00000132067	protein_coding		12	-1	72940083	793
ENSMUSG00000097169	TEC	Gm26661	ENSMUST00000181025	TEC		14	1	7791587	471
ENSMUSG00000099354	antisense	1700124L16Rik	ENSMUST00000189129	antisense		6	-1	83762508	349
ENSMUSG00000015488	protein_coding	Cacfd1	ENSMUST00000114007	protein_coding	principal1	2	1	27009926	2689
ENSMUSG00000103518	processed_pseudogene	Gm37428	ENSMUST00000193886	processed_pseudogene		3	1	92320911	137
ENSMUSG00000074480	protein_coding	Mex3a	ENSMUST00000172699	protein_coding	principal1	3	1	88532395	5778
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000208739	retained_intron		8	1	3500495	2889
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000132028	protein_coding		2	1	32363010	738
ENSMUSG00000099354	antisense	1700124L16Rik	ENSMUST00000189308	antisense		6	-1	83762842	546
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000160338	protein_coding		8	1	3500504	363
ENSMUSG00000084775	lincRNA	Gm16741	ENSMUST00000145085	lincRNA		14	1	7749945	1818
ENSMUSG00000103221	processed_pseudogene	Sprr2c-ps	ENSMUST00000195581	processed_pseudogene		3	1	92326600	301
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000202138	protein_coding	alternative2	5	1	33722306	3960
ENSMUSG00000113788	lincRNA	Gm47904	ENSMUST00000221310	lincRNA		13	1	4091286	1285
ENSMUSG00000099354	antisense	1700124L16Rik	ENSMUST00000190077	antisense		6	-1	83762865	1110
ENSMUSG00000021098	protein_coding	4930447C04Rik	ENSMUST00000110489	protein_coding	alternative2	12	-1	72917760	1988
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000208306	protein_coding		8	1	3500534	435
ENSMUSG00000015488	protein_coding	Cacfd1	ENSMUST00000133126	processed_transcript		2	1	27010013	415
ENSMUSG00000005540	protein_coding	Fcer2a	ENSMUST00000005678	protein_coding	principal3	8	-1	3694175	2242
ENSMUSG00000073574	protein_coding	Grxcr2	ENSMUST00000097591	protein_coding	principal1	18	-1	41999049	1998
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000136079	protein_coding		2	1	32363061	816
ENSMUSG00000113517	TEC	Gm47905	ENSMUST00000220915	TEC		13	1	4097498	3334
ENSMUSG00000029074	protein_coding	Ttll10	ENSMUST00000184348	protein_coding	alternative2	4	-1	156059414	2556
ENSMUSG00000022184	protein_coding	Fbxo4	ENSMUST00000022791	protein_coding	principal1	15	-1	3979573	1565
ENSMUSG00000015488	protein_coding	Cacfd1	ENSMUST00000133807	protein_coding		2	1	27010082	645
ENSMUSG00000099405	processed_pseudogene	Gm8506	ENSMUST00000186661	processed_pseudogene		Y	1	2895798	829
ENSMUSG00000040612	protein_coding	Ildr2	ENSMUST00000111416	protein_coding	principal2	1	1	166254139	8251
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000169212	protein_coding	principal4	5	1	33721724	4245
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000048964	protein_coding	principal3	2	1	32363198	2771
ENSMUSG00000110460	processed_pseudogene	Gm20786	ENSMUST00000212649	processed_pseudogene		8	-1	19943265	436
ENSMUSG00000044155	protein_coding	Lsm8	ENSMUST00000056398	protein_coding	principal1	6	1	18848579	807
ENSMUSG00000015488	protein_coding	Cacfd1	ENSMUST00000114003	protein_coding		2	1	27010593	727
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000114411	protein_coding	alternative2	5	1	33721724	4225
ENSMUSG00000015488	protein_coding	Cacfd1	ENSMUST00000145290	retained_intron		2	1	27015583	384
ENSMUSG00000029074	protein_coding	Ttll10	ENSMUST00000184684	protein_coding		4	-1	156050465	1558
ENSMUSG00000054252	protein_coding	Fgfr3	ENSMUST00000171509	protein_coding	alternative2	5	1	33722306	4020
ENSMUSG00000005540	protein_coding	Fcer2a	ENSMUST00000208145	protein_coding	alternative2	8	-1	3690390	1064
ENSMUSG00000022184	protein_coding	Fbxo4	ENSMUST00000148817	processed_transcript		15	-1	3972860	448
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000162797	retained_intron		8	1	3505779	2445
ENSMUSG00000024114	protein_coding	Prss41	ENSMUST00000024926	protein_coding	principal1	17	-1	23844172	1128
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000159808	retained_intron		8	1	3510667	621
ENSMUSG00000044155	protein_coding	Lsm8	ENSMUST00000136982	retained_intron		6	1	18848641	3305
ENSMUSG00000106896	TEC	G630022F23Rik	ENSMUST00000202923	TEC		5	-1	33723669	3627
ENSMUSG00000005540	protein_coding	Fcer2a	ENSMUST00000208492	protein_coding	alternative2	8	-1	3690861	1053
ENSMUSG00000090383	protein_coding	Vmn2r58	ENSMUST00000171671	protein_coding	principal1	7	-1	41872712	3698
ENSMUSG00000029074	protein_coding	Ttll10	ENSMUST00000184750	processed_transcript		4	-1	156043963	631
ENSMUSG00000022184	protein_coding	Fbxo4	ENSMUST00000148169	retained_intron		15	-1	3971982	583
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000159538	retained_intron		8	1	3511596	373
ENSMUSG00000044155	protein_coding	Lsm8	ENSMUST00000128526	retained_intron		6	1	18848656	890
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000208359	protein_coding		8	1	3511790	577
ENSMUSG00000087662	lincRNA	Gm11373	ENSMUST00000129791	lincRNA		13	-1	31330767	2819
ENSMUSG00000024114	protein_coding	Prss41	ENSMUST00000151797	protein_coding		17	-1	23844172	1799
ENSMUSG00000090383	protein_coding	Vmn2r58	ENSMUST00000233957	nonsense_mediated_decay		7	-1	41872712	3826
ENSMUSG00000090383	protein_coding	Vmn2r58	ENSMUST00000233389	nonsense_mediated_decay		7	-1	41872712	3957
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000208943	protein_coding		8	1	3511801	445
ENSMUSG00000005540	protein_coding	Fcer2a	ENSMUST00000208438	protein_coding	alternative2	8	-1	3690827	930
ENSMUSG00000079703	protein_coding	Ssxb8	ENSMUST00000185125	protein_coding	principal1	X	-1	8690844	559
ENSMUSG00000044155	protein_coding	Lsm8	ENSMUST00000201141	protein_coding		6	1	18848668	503
ENSMUSG00000090383	protein_coding	Vmn2r58	ENSMUST00000233147	nonsense_mediated_decay		7	-1	41872712	4085
ENSMUSG00000005540	protein_coding	Fcer2a	ENSMUST00000208603	protein_coding	alternative2	8	-1	3690827	930
ENSMUSG00000090383	protein_coding	Vmn2r58	ENSMUST00000233081	protein_coding		7	-1	41872712	3574
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000161842	protein_coding		8	1	3512682	626
ENSMUSG00000090383	protein_coding	Vmn2r58	ENSMUST00000233177	nonsense_mediated_decay		7	-1	41872712	3874
ENSMUSG00000024114	protein_coding	Prss41	ENSMUST00000141788	retained_intron		17	-1	23844149	903
ENSMUSG00000004567	protein_coding	Mcoln1	ENSMUST00000161705	retained_intron		8	1	3513023	2110
ENSMUSG00000090383	protein_coding	Vmn2r58	ENSMUST00000232976	retained_intron		7	-1	41872712	2587
ENSMUSG00000079703	protein_coding	Ssxb8	ENSMUST00000101690	protein_coding	principal1	X	-1	8690844	518
ENSMUSG00000005540	protein_coding	Fcer2a	ENSMUST00000207635	protein_coding		8	-1	3691161	922
ENSMUSG00000104105	unprocessed_pseudogene	Gm37878	ENSMUST00000192108	unprocessed_pseudogene		6	-1	41021884	387
ENSMUSG00000005540	protein_coding	Fcer2a	ENSMUST00000207463	protein_coding		8	-1	3691163	885
ENSMUSG00000113688	TEC	A930027P06Rik	ENSMUST00000221298	TEC		13	1	17951938	2975
ENSMUSG00000048992	protein_coding	Prss32	ENSMUST00000144925	processed_transcript		17	1	23843855	229
ENSMUSG00000113770	lincRNA	1700019C18Rik	ENSMUST00000221688	lincRNA		13	-1	35211931	1047
ENSMUSG00000113770	lincRNA	1700019C18Rik	ENSMUST00000222085	lincRNA		13	-1	35212023	1766
ENSMUSG00000005540	protein_coding	Fcer2a	ENSMUST00000207327	retained_intron		8	-1	3694174	1101
ENSMUSG00000110935	processed_pseudogene	Gm8834	ENSMUST00000216459	processed_pseudogene		10	1	34898256	565
ENSMUSG00000019796	protein_coding	Lrp11	ENSMUST00000134346	protein_coding		10	1	7589800	1492
ENSMUSG00000111042	transcribed_processed_pseudogene	Gm18252	ENSMUST00000214814	processed_transcript		10	1	34878624	527
ENSMUSG00000111042	transcribed_processed_pseudogene	Gm18252	ENSMUST00000214886	processed_transcript		10	1	34878624	409
ENSMUSG00000021099	protein_coding	Six6	ENSMUST00000021519	protein_coding	principal1	12	1	72939892	4009
ENSMUSG00000111042	transcribed_processed_pseudogene	Gm18252	ENSMUST00000215855	transcribed_processed_pseudogene		10	1	34881408	757
ENSMUSG00000110649	unprocessed_pseudogene	Gm40466	ENSMUST00000212174	unprocessed_pseudogene		8	1	20001099	422
ENSMUSG00000113770	lincRNA	1700019C18Rik	ENSMUST00000220954	lincRNA		13	-1	35212048	410
ENSMUSG00000110589	processed_pseudogene	Gm45754	ENSMUST00000212380	processed_pseudogene		8	-1	20019411	279
ENSMUSG00000111216	processed_pseudogene	Gm47044	ENSMUST00000216575	processed_pseudogene		10	1	35142313	266
ENSMUSG00000113906	lincRNA	4930529N20Rik	ENSMUST00000222642	lincRNA		13	-1	35167804	364
ENSMUSG00000103157	processed_pseudogene	Gm38294	ENSMUST00000192831	processed_pseudogene		6	1	41026265	381
ENSMUSG00000100751	processed_pseudogene	Gm5116	ENSMUST00000187732	processed_pseudogene		7	1	32495638	463
ENSMUSG00000042212	protein_coding	Sprr2d	ENSMUST00000047477	protein_coding	principal1	3	1	92339140	681
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000113332	protein_coding	alternative2	2	1	32363198	2973
ENSMUSG00000100386	unprocessed_pseudogene	Scgb2b13-ps	ENSMUST00000190420	unprocessed_pseudogene		7	-1	32509279	328
ENSMUSG00000113906	lincRNA	4930529N20Rik	ENSMUST00000220538	lincRNA		13	-1	35172309	639
ENSMUSG00000094111	processed_pseudogene	Nutf2-ps2	ENSMUST00000179225	processed_pseudogene		18	-1	10483465	379
ENSMUSG00000021245	protein_coding	Mlh3	ENSMUST00000019378	protein_coding	principal2	12	-1	85270599	5463
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000114011	protein_coding	principal1	17	1	34981880	840
ENSMUSG00000113985	lincRNA	9130015A21Rik	ENSMUST00000221491	lincRNA		12	-1	35674503	651
ENSMUSG00000100949	unprocessed_pseudogene	Scgb1b13-ps	ENSMUST00000187330	unprocessed_pseudogene		7	1	32517013	273
ENSMUSG00000074365	protein_coding	Crxos	ENSMUST00000125993	protein_coding		7	1	15882617	2246
ENSMUSG00000075232	protein_coding	Amd1	ENSMUST00000099945	protein_coding	principal1	10	-1	40302186	3204
ENSMUSG00000040612	protein_coding	Ildr2	ENSMUST00000194964	protein_coding	alternative2	1	1	166254193	2467
ENSMUSG00000037583	protein_coding	Nr0b2	ENSMUST00000042706	protein_coding	principal1	4	1	133553376	1132
ENSMUSG00000074365	protein_coding	Crxos	ENSMUST00000130566	protein_coding		7	1	15882653	454
ENSMUSG00000072723	transcribed_unprocessed_pseudogene	Gm10044	ENSMUST00000081331	processed_transcript		14	-1	7791651	1296
ENSMUSG00000040612	protein_coding	Ildr2	ENSMUST00000192638	protein_coding	alternative2	1	1	166254193	2587
ENSMUSG00000094827	processed_pseudogene	Gm5327	ENSMUST00000182864	processed_pseudogene		7	1	32545759	1009
ENSMUSG00000021245	protein_coding	Mlh3	ENSMUST00000223005	retained_intron		12	-1	85242978	3450
ENSMUSG00000075232	protein_coding	Amd1	ENSMUST00000238953	protein_coding		10	-1	40302186	3204
ENSMUSG00000004929	protein_coding	Thop1	ENSMUST00000005057	protein_coding	principal1	10	1	81070035	2832
ENSMUSG00000049411	protein_coding	Tmem241	ENSMUST00000209628	protein_coding		18	-1	12074631	670
ENSMUSG00000072723	transcribed_unprocessed_pseudogene	Gm10044	ENSMUST00000166813	processed_transcript		14	-1	7791575	1471
ENSMUSG00000040612	protein_coding	Ildr2	ENSMUST00000192426	protein_coding		1	1	166254193	1238
ENSMUSG00000021245	protein_coding	Mlh3	ENSMUST00000220854	protein_coding	alternative2	12	-1	85270599	4699
ENSMUSG00000040612	protein_coding	Ildr2	ENSMUST00000195557	protein_coding	alternative2	1	1	166254193	1947
ENSMUSG00000113985	lincRNA	9130015A21Rik	ENSMUST00000222894	lincRNA		12	-1	35686304	550
ENSMUSG00000072723	transcribed_unprocessed_pseudogene	Gm10044	ENSMUST00000163635	processed_transcript		14	-1	7774069	445
ENSMUSG00000040612	protein_coding	Ildr2	ENSMUST00000192732	protein_coding		1	1	166254193	2263
ENSMUSG00000040612	protein_coding	Ildr2	ENSMUST00000193860	protein_coding		1	1	166254193	2320
ENSMUSG00000072723	transcribed_unprocessed_pseudogene	Gm10044	ENSMUST00000172460	processed_transcript		14	-1	7774139	632
ENSMUSG00000113985	lincRNA	9130015A21Rik	ENSMUST00000222153	lincRNA		12	-1	35695118	837
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000108081	protein_coding	principal2	11	-1	84870789	3034
ENSMUSG00000004929	protein_coding	Thop1	ENSMUST00000167658	retained_intron		10	1	81070127	1877
ENSMUSG00000113548	lincRNA	Gm34047	ENSMUST00000223547	lincRNA		12	1	35602544	606
ENSMUSG00000072723	transcribed_unprocessed_pseudogene	Gm10044	ENSMUST00000170177	processed_transcript		14	-1	7791553	659
ENSMUSG00000021245	protein_coding	Mlh3	ENSMUST00000166821	protein_coding	principal2	12	-1	85270591	5420
ENSMUSG00000042942	protein_coding	Greb1l	ENSMUST00000173356	retained_intron		18	1	10325177	3701
ENSMUSG00000029074	protein_coding	Ttll10	ENSMUST00000097731	retained_intron		4	-1	156059344	2177
ENSMUSG00000072723	transcribed_unprocessed_pseudogene	Gm10044	ENSMUST00000238229	transcribed_unprocessed_pseudogene		14	-1	7791652	711
ENSMUSG00000110837	processed_pseudogene	Gm18729	ENSMUST00000217230	processed_pseudogene		10	-1	35242743	621
ENSMUSG00000094421	unprocessed_pseudogene	Gm20778	ENSMUST00000178524	unprocessed_pseudogene		8	1	20035108	627
ENSMUSG00000029074	protein_coding	Ttll10	ENSMUST00000183563	processed_transcript		4	-1	156044823	256
ENSMUSG00000111753	lincRNA	1700054O05Rik	ENSMUST00000214107	lincRNA		10	-1	35485396	555
ENSMUSG00000075232	protein_coding	Amd1	ENSMUST00000213620	retained_intron		10	-1	40302186	1442
ENSMUSG00000004929	protein_coding	Thop1	ENSMUST00000171484	processed_transcript		10	1	81070159	466
ENSMUSG00000073928	protein_coding	Olfr651	ENSMUST00000216246	processed_transcript		7	1	104550133	1248
ENSMUSG00000053101	protein_coding	Gpr141	ENSMUST00000065335	protein_coding	principal1	13	-1	19824257	3433
ENSMUSG00000048992	protein_coding	Prss32	ENSMUST00000061725	protein_coding	principal1	17	1	23853543	1689
ENSMUSG00000073928	protein_coding	Olfr651	ENSMUST00000216904	protein_coding	principal1	7	1	104550133	1598
ENSMUSG00000075232	protein_coding	Amd1	ENSMUST00000214698	protein_coding		10	-1	40301576	716
ENSMUSG00000035371	protein_coding	Ssx9	ENSMUST00000103001	protein_coding	principal1	X	1	8748432	602
ENSMUSG00000063314	processed_pseudogene	Gm12657	ENSMUST00000119560	processed_pseudogene		4	1	94599385	411
ENSMUSG00000004929	protein_coding	Thop1	ENSMUST00000166015	retained_intron		10	1	81073279	733
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000192758	retained_intron		2	1	32363353	4711
ENSMUSG00000004929	protein_coding	Thop1	ENSMUST00000166404	retained_intron		10	1	81078868	935
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000219195	protein_coding		10	1	101681626	1061
ENSMUSG00000029074	protein_coding	Ttll10	ENSMUST00000153649	processed_transcript		4	-1	156047972	758
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000136325	processed_transcript		2	1	32363433	448
ENSMUSG00000063953	protein_coding	Amd2	ENSMUST00000080898	protein_coding	principal1	10	-1	35711892	3218
ENSMUSG00000024160	protein_coding	Spsb3	ENSMUST00000117890	protein_coding	alternative2	17	1	24886643	1641
ENSMUSG00000075232	protein_coding	Amd1	ENSMUST00000216993	retained_intron		10	-1	40302057	695
ENSMUSG00000053101	protein_coding	Gpr141	ENSMUST00000222664	protein_coding		13	-1	19824227	646
ENSMUSG00000073928	protein_coding	Olfr651	ENSMUST00000098176	protein_coding	principal1	7	1	104552884	1069
ENSMUSG00000029074	protein_coding	Ttll10	ENSMUST00000030951	retained_intron		4	-1	156047940	596
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000131152	nonsense_mediated_decay		2	1	32363554	684
ENSMUSG00000075232	protein_coding	Amd1	ENSMUST00000238969	protein_coding	principal1	10	-1	40302188	3206
ENSMUSG00000053101	protein_coding	Gpr141	ENSMUST00000222772	retained_intron		13	-1	19824257	1531
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000134930	processed_transcript		10	1	101681641	709
ENSMUSG00000064325	protein_coding	Hhip	ENSMUST00000155850	processed_transcript		8	-1	79990349	1173
ENSMUSG00000055030	protein_coding	Sprr2e	ENSMUST00000068399	protein_coding	principal1	3	1	92352143	647
ENSMUSG00000019796	protein_coding	Lrp11	ENSMUST00000019931	protein_coding	principal2	10	1	7589817	3386
ENSMUSG00000024160	protein_coding	Spsb3	ENSMUST00000120943	protein_coding	alternative2	17	1	24886680	1949
ENSMUSG00000053101	protein_coding	Gpr141	ENSMUST00000221268	retained_intron		13	-1	19824257	1334
ENSMUSG00000081665	polymorphic_pseudogene	Gm15922	ENSMUST00000118068	polymorphic_pseudogene	principal1	7	-1	3739889	3462
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000127504	protein_coding		10	1	101681641	694
ENSMUSG00000048992	protein_coding	Prss32	ENSMUST00000154347	nonsense_mediated_decay		17	1	23853786	917
ENSMUSG00000110458	processed_pseudogene	Gm21769	ENSMUST00000211922	processed_pseudogene		8	1	20122384	111
ENSMUSG00000082790	processed_pseudogene	Gm12155	ENSMUST00000121267	processed_pseudogene		11	-1	44387274	160
ENSMUSG00000048992	protein_coding	Prss32	ENSMUST00000233370	nonsense_mediated_decay		17	1	23853878	1331
ENSMUSG00000113542	processed_pseudogene	Gm19154	ENSMUST00000223330	processed_pseudogene		13	1	19820739	940
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000156751	protein_coding		10	1	101681746	703
ENSMUSG00000024160	protein_coding	Spsb3	ENSMUST00000068508	protein_coding		17	1	24886680	2004
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000147338	retained_intron		2	1	32363756	993
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000113331	protein_coding	alternative2	2	1	32363805	2604
ENSMUSG00000108610	processed_pseudogene	Gm29725	ENSMUST00000206614	processed_pseudogene		7	-1	16647789	407
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000168434	protein_coding	alternative1	11	-1	84870817	3056
ENSMUSG00000089697	antisense	Gm15947	ENSMUST00000161395	antisense		17	-1	23858647	2742
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000192055	retained_intron		2	1	32365345	742
ENSMUSG00000019796	protein_coding	Lrp11	ENSMUST00000130590	protein_coding	alternative2	10	1	7589979	3220
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000138522	protein_coding		10	1	102158858	769
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000130580	processed_transcript		10	1	102158878	485
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000139637	protein_coding		2	1	32367412	733
ENSMUSG00000019796	protein_coding	Lrp11	ENSMUST00000135907	protein_coding		10	1	7590127	976
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000154915	protein_coding	alternative1	11	-1	84870202	2528
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000151806	protein_coding		2	1	32367472	786
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000138016	protein_coding		10	1	102158889	402
ENSMUSG00000085196	lincRNA	Gm14963	ENSMUST00000146751	lincRNA		19	-1	6276605	2558
ENSMUSG00000019796	protein_coding	Lrp11	ENSMUST00000124961	protein_coding		10	1	7596184	652
ENSMUSG00000087350	processed_pseudogene	Gm16254	ENSMUST00000131528	processed_pseudogene		10	-1	7606813	730
ENSMUSG00000024160	protein_coding	Spsb3	ENSMUST00000130194	processed_transcript		17	1	24886702	420
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000132290	processed_transcript		2	1	32370062	532
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000018547	protein_coding		11	-1	84870646	2478
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000125482	protein_coding		2	1	32370909	864
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000221760	lincRNA		13	1	35167927	779
ENSMUSG00000108307	transcribed_unprocessed_pseudogene	Ceacam-ps1	ENSMUST00000205380	processed_transcript		7	-1	16657476	794
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000221013	lincRNA		13	1	35167927	824
ENSMUSG00000046157	protein_coding	Tmem229b	ENSMUST00000070174	protein_coding	principal1	12	-1	78983478	3656
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000223526	lincRNA		13	1	35170349	889
ENSMUSG00000108307	transcribed_unprocessed_pseudogene	Ceacam-ps1	ENSMUST00000206683	transcribed_unprocessed_pseudogene		7	-1	16651780	630
ENSMUSG00000024160	protein_coding	Spsb3	ENSMUST00000119829	protein_coding	alternative2	17	1	24886737	1955
ENSMUSG00000102015	unprocessed_pseudogene	Gm21476	ENSMUST00000187167	unprocessed_pseudogene		Y	1	27253916	693
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000220654	lincRNA		13	1	35180014	1033
ENSMUSG00000071816	protein_coding	Ssxb5	ENSMUST00000089370	protein_coding	principal1	X	1	8803691	602
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000145957	retained_intron		2	1	32371835	876
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000219683	processed_transcript		10	1	102158905	657
ENSMUSG00000050243	processed_pseudogene	Gm5446	ENSMUST00000091762	processed_pseudogene		13	-1	19995804	784
ENSMUSG00000046157	protein_coding	Tmem229b	ENSMUST00000174697	protein_coding	principal1	12	-1	79007627	3697
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000218554	processed_transcript		10	1	102158905	658
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000100686	protein_coding		11	-1	84870740	2275
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000189905	retained_intron		13	1	35180267	2483
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000222668	lincRNA		13	1	35181551	821
ENSMUSG00000024160	protein_coding	Spsb3	ENSMUST00000134932	retained_intron		17	1	24886759	1950
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000222690	lincRNA		13	1	35181582	394
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000220859	lincRNA		13	1	35181582	422
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000137220	retained_intron		2	1	32372317	838
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000143640	processed_transcript		10	1	102158905	680
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000132098	protein_coding		11	-1	84836468	552
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000221256	lincRNA		13	1	35181591	800
ENSMUSG00000029882	protein_coding	2210010C04Rik	ENSMUST00000031931	protein_coding	principal1	6	-1	41035509	2142
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000134141	retained_intron		2	1	32374209	3469
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000189140	lincRNA		13	1	35181623	651
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000170741	protein_coding		11	-1	84870725	557
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000220995	lincRNA		13	1	35181627	831
ENSMUSG00000046157	protein_coding	Tmem229b	ENSMUST00000174072	protein_coding	principal1	12	-1	78980763	3621
ENSMUSG00000102099	processed_transcript	1700011B04Rik	ENSMUST00000221261	lincRNA		13	1	35186236	628
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000149184	retained_intron		2	1	32375108	704
ENSMUSG00000050635	protein_coding	Sprr2f	ENSMUST00000050397	protein_coding	principal1	3	1	92365187	609
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000168267	processed_transcript		11	-1	84837984	385
ENSMUSG00000110865	processed_pseudogene	Gm47046	ENSMUST00000213320	processed_pseudogene		10	-1	35859450	440
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000125818	protein_coding		2	1	32375489	996
ENSMUSG00000111550	lincRNA	Gm49446	ENSMUST00000213846	lincRNA		10	1	35838490	2671
ENSMUSG00000039977	protein_coding	Deup1	ENSMUST00000115592	protein_coding		9	-1	15626731	2918
ENSMUSG00000042992	protein_coding	Borcs5	ENSMUST00000166591	protein_coding		6	1	134639510	792
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000134043	processed_transcript		11	-1	84858494	324
ENSMUSG00000046157	protein_coding	Tmem229b	ENSMUST00000056660	protein_coding	principal1	12	-1	79007277	3860
ENSMUSG00000039205	protein_coding	Ciz1	ENSMUST00000113338	protein_coding	principal3	2	1	32363810	2666
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000020039	protein_coding	principal1	10	1	102159079	3735
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000165459	retained_intron		11	-1	84860659	412
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000150546	processed_transcript		2	1	90940382	350
ENSMUSG00000074365	protein_coding	Crxos	ENSMUST00000098801	protein_coding	principal1	7	1	15896124	934
ENSMUSG00000046203	polymorphic_pseudogene	Sprr2g	ENSMUST00000189634	polymorphic_pseudogene		3	1	92373915	651
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000166425	protein_coding		11	-1	84870491	386
ENSMUSG00000096401	unprocessed_pseudogene	Gm21811	ENSMUST00000096485	unprocessed_pseudogene		8	1	20136502	930
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000218984	retained_intron		10	1	102372006	3543
ENSMUSG00000046203	polymorphic_pseudogene	Sprr2g	ENSMUST00000056590	protein_coding	principal1	3	1	92373915	650
ENSMUSG00000078795	protein_coding	Ceacam15	ENSMUST00000108498	protein_coding	principal1	7	-1	16675705	1391
ENSMUSG00000046157	protein_coding	Tmem229b	ENSMUST00000174721	protein_coding		12	-1	79007340	537
ENSMUSG00000042992	protein_coding	Borcs5	ENSMUST00000062755	protein_coding	principal1	6	1	134640940	1764
ENSMUSG00000028469	protein_coding	Npr2	ENSMUST00000030191	protein_coding	principal1	4	1	43631935	3660
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000167429	processed_transcript		11	-1	84870779	1205
ENSMUSG00000082129	unprocessed_pseudogene	Gm14502	ENSMUST00000118154	unprocessed_pseudogene		X	-1	8830434	113
ENSMUSG00000021414	protein_coding	Fam217a	ENSMUST00000021851	protein_coding	principal2	13	-1	34919995	2402
ENSMUSG00000046157	protein_coding	Tmem229b	ENSMUST00000174344	processed_transcript		12	-1	78980778	350
ENSMUSG00000042807	protein_coding	Hecw2	ENSMUST00000120904	protein_coding	principal1	1	-1	54194048	11263
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000120748	protein_coding	principal1	10	1	102374435	2603
ENSMUSG00000024160	protein_coding	Spsb3	ENSMUST00000024976	protein_coding	principal3	17	1	24887165	1947
ENSMUSG00000039977	protein_coding	Deup1	ENSMUST00000045513	protein_coding	principal1	9	-1	15627903	2583
ENSMUSG00000087140	lincRNA	Gm11376	ENSMUST00000144541	lincRNA		13	1	31392578	231
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000163753	protein_coding	principal1	10	1	102158858	3862
ENSMUSG00000020530	protein_coding	Ggnbp2	ENSMUST00000172405	protein_coding	principal2	11	-1	84870738	2950
ENSMUSG00000046157	protein_coding	Tmem229b	ENSMUST00000173095	processed_transcript		12	-1	79006663	459
ENSMUSG00000108370	processed_pseudogene	Gm8209	ENSMUST00000206386	processed_pseudogene		7	-1	16694369	553
ENSMUSG00000042992	protein_coding	Borcs5	ENSMUST00000203163	retained_intron		6	1	134640961	683
ENSMUSG00000024160	protein_coding	Spsb3	ENSMUST00000144430	processed_transcript		17	1	24887864	295
ENSMUSG00000021414	protein_coding	Fam217a	ENSMUST00000225242	protein_coding	alternative2	13	-1	34916989	1811
ENSMUSG00000108366	processed_pseudogene	Gm5586	ENSMUST00000206264	processed_pseudogene		7	-1	16719910	795
ENSMUSG00000107538	lincRNA	Gm44127	ENSMUST00000203565	lincRNA		6	1	84225252	291
ENSMUSG00000039977	protein_coding	Deup1	ENSMUST00000137164	processed_transcript		9	-1	15588089	472
ENSMUSG00000074365	protein_coding	Crxos	ENSMUST00000150050	protein_coding		7	1	15896171	2090
ENSMUSG00000042992	protein_coding	Borcs5	ENSMUST00000203234	retained_intron		6	1	134641255	485
ENSMUSG00000042807	protein_coding	Hecw2	ENSMUST00000150677	processed_transcript		1	-1	53841171	363
ENSMUSG00000024160	protein_coding	Spsb3	ENSMUST00000168265	protein_coding	alternative2	17	1	24886674	1953
ENSMUSG00000075148	protein_coding	Olfr1141	ENSMUST00000099846	protein_coding	principal1	2	-1	87753991	936
ENSMUSG00000039977	protein_coding	Deup1	ENSMUST00000152377	protein_coding		9	-1	15627914	1328
ENSMUSG00000030427	protein_coding	Lilra6	ENSMUST00000206077	protein_coding		7	-1	3915501	2281
ENSMUSG00000042992	protein_coding	Borcs5	ENSMUST00000204133	processed_transcript		6	1	134701550	554
ENSMUSG00000107797	lincRNA	Gm10445	ENSMUST00000203521	lincRNA		6	-1	84423838	762
ENSMUSG00000021414	protein_coding	Fam217a	ENSMUST00000223834	protein_coding	alternative2	13	-1	34924310	2253
ENSMUSG00000085620	lincRNA	G630018N14Rik	ENSMUST00000148552	lincRNA		13	-1	31367688	561
ENSMUSG00000074365	protein_coding	Crxos	ENSMUST00000173808	nonsense_mediated_decay		7	1	15897406	528
ENSMUSG00000104334	TEC	Gm38282	ENSMUST00000192751	TEC		15	1	6996037	695
ENSMUSG00000028469	protein_coding	Npr2	ENSMUST00000107874	protein_coding		4	1	43632185	3480
ENSMUSG00000079699	protein_coding	Gm6592	ENSMUST00000115563	protein_coding	principal1	X	1	8843994	507
ENSMUSG00000027004	protein_coding	Frzb	ENSMUST00000028389	protein_coding	principal1	2	-1	80447625	3149
ENSMUSG00000019888	protein_coding	Mgat4c	ENSMUST00000179929	protein_coding	principal1	10	1	101681487	4272
ENSMUSG00000107926	lincRNA	4930504D19Rik	ENSMUST00000204799	lincRNA		6	1	84535876	349
ENSMUSG00000021414	protein_coding	Fam217a	ENSMUST00000224613	retained_intron		13	-1	34916981	615
ENSMUSG00000108166	sense_intronic	Gm44017	ENSMUST00000203231	sense_intronic		6	1	134689859	740
ENSMUSG00000074365	protein_coding	Crxos	ENSMUST00000171280	protein_coding		7	1	15901646	571
ENSMUSG00000039977	protein_coding	Deup1	ENSMUST00000115593	protein_coding		9	-1	15627933	3019
ENSMUSG00000042807	protein_coding	Hecw2	ENSMUST00000152870	processed_transcript		1	-1	53866512	665
ENSMUSG00000092328	unprocessed_pseudogene	Vmn2r-ps57	ENSMUST00000173861	unprocessed_pseudogene		7	-1	41980928	2598
ENSMUSG00000081120	processed_pseudogene	Gm12458	ENSMUST00000119387	processed_pseudogene		4	-1	50051403	495
ENSMUSG00000068816	protein_coding	Olfr152	ENSMUST00000105210	protein_coding	alternative1	2	1	87779483	2084
ENSMUSG00000042807	protein_coding	Hecw2	ENSMUST00000146850	retained_intron		1	-1	54195168	1933
ENSMUSG00000030427	protein_coding	Lilra6	ENSMUST00000131255	retained_intron		7	-1	3915503	2782
ENSMUSG00000068816	protein_coding	Olfr152	ENSMUST00000215394	protein_coding	alternative1	2	1	87780551	2172
ENSMUSG00000085620	lincRNA	G630018N14Rik	ENSMUST00000221171	lincRNA		13	-1	31408922	5888
ENSMUSG00000111299	antisense	4930540M03Rik	ENSMUST00000216952	antisense		9	1	15619857	437
ENSMUSG00000068816	protein_coding	Olfr152	ENSMUST00000090709	protein_coding	principal2	2	1	87782536	951
ENSMUSG00000085620	lincRNA	G630018N14Rik	ENSMUST00000135656	lincRNA		13	-1	31408922	1231
ENSMUSG00000064325	protein_coding	Hhip	ENSMUST00000079038	protein_coding	principal1	8	-1	80058006	9074
ENSMUSG00000083623	unprocessed_pseudogene	Gm7224	ENSMUST00000121359	unprocessed_pseudogene		7	-1	42050212	2066
ENSMUSG00000027004	protein_coding	Frzb	ENSMUST00000142459	processed_transcript		2	-1	80438630	830
ENSMUSG00000042807	protein_coding	Hecw2	ENSMUST00000097741	protein_coding		1	-1	54195034	1132
ENSMUSG00000113030	processed_transcript	Gm48778	ENSMUST00000223489	processed_transcript		13	-1	17992533	558
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000107234	protein_coding	principal1	7	-1	89980983	2067
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000174241	processed_transcript		17	1	34981911	521
ENSMUSG00000076462	TR_V_gene	Trbv2	ENSMUST00000103263	TR_V_gene	principal1	6	1	41047340	560
ENSMUSG00000042807	protein_coding	Hecw2	ENSMUST00000087659	protein_coding	principal1	1	-1	54195034	11171
ENSMUSG00000068948	unprocessed_pseudogene	Olfr363-ps	ENSMUST00000119049	unprocessed_pseudogene		2	-1	37106510	254
ENSMUSG00000085767	antisense	Gm13563	ENSMUST00000125518	antisense		2	1	26381526	643
ENSMUSG00000110987	processed_pseudogene	Gm47048	ENSMUST00000215218	processed_pseudogene		10	1	36095876	620
ENSMUSG00000102868	TEC	Gm37633	ENSMUST00000192858	TEC		1	-1	54155096	2700
ENSMUSG00000075377	protein_coding	Olfr362	ENSMUST00000213817	protein_coding	principal1	2	-1	37117783	4059
ENSMUSG00000104069	TEC	Gm37198	ENSMUST00000195593	TEC		1	1	60779352	2110
ENSMUSG00000049411	protein_coding	Tmem241	ENSMUST00000050228	nonsense_mediated_decay		18	-1	12121468	2802
ENSMUSG00000085767	antisense	Gm13563	ENSMUST00000152375	antisense		2	1	26385552	613
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000207980	protein_coding		7	-1	89964841	767
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000238792	protein_coding		7	-1	89980702	1503
ENSMUSG00000085965	lincRNA	2310016D23Rik	ENSMUST00000130082	lincRNA		1	1	60778843	388
ENSMUSG00000036693	protein_coding	Nop14	ENSMUST00000041364	protein_coding	principal1	5	-1	34660148	2702
ENSMUSG00000085767	antisense	Gm13563	ENSMUST00000150375	antisense		2	1	26387457	851
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000207609	retained_intron		7	-1	89956938	774
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000174326	processed_transcript		17	1	34982121	368
ENSMUSG00000049721	protein_coding	Gal3st1	ENSMUST00000078757	protein_coding	principal1	11	1	3983636	1749
ENSMUSG00000075377	protein_coding	Olfr362	ENSMUST00000215927	protein_coding	principal1	2	-1	37117910	1210
ENSMUSG00000036693	protein_coding	Nop14	ENSMUST00000201897	protein_coding		5	-1	34647241	467
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000208245	retained_intron		7	-1	89964791	609
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000182149	protein_coding	alternative2	1	-1	162740525	11289
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000207996	retained_intron		7	-1	89962827	639
ENSMUSG00000073436	protein_coding	Eme2	ENSMUST00000119848	protein_coding		17	-1	24895055	5226
ENSMUSG00000092032	protein_coding	Vmn2r59	ENSMUST00000168489	protein_coding	principal1	7	-1	42059023	3148
ENSMUSG00000083118	processed_pseudogene	Gm11609	ENSMUST00000121926	processed_pseudogene		1	1	60792490	793
ENSMUSG00000075377	protein_coding	Olfr362	ENSMUST00000100144	protein_coding	principal1	2	-1	37105648	954
ENSMUSG00000031591	protein_coding	Asah1	ENSMUST00000034000	protein_coding	principal1	8	-1	41374773	2773
ENSMUSG00000036693	protein_coding	Nop14	ENSMUST00000152393	retained_intron		5	-1	34648505	383
ENSMUSG00000092032	protein_coding	Vmn2r59	ENSMUST00000233327	nonsense_mediated_decay		7	-1	42059023	3655
ENSMUSG00000028469	protein_coding	Npr2	ENSMUST00000123883	processed_transcript		4	1	43641116	2669
ENSMUSG00000092032	protein_coding	Vmn2r59	ENSMUST00000233456	protein_coding		7	-1	42059023	8021
ENSMUSG00000109738	processed_pseudogene	Gm33096	ENSMUST00000210189	processed_pseudogene		8	-1	80086697	493
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000007266	protein_coding		17	1	34982129	873
ENSMUSG00000092032	protein_coding	Vmn2r59	ENSMUST00000233351	retained_intron		7	-1	42059023	15057
ENSMUSG00000028469	protein_coding	Npr2	ENSMUST00000144418	processed_transcript		4	1	43641255	424
ENSMUSG00000082491	processed_pseudogene	Gm5909	ENSMUST00000119768	processed_pseudogene		8	-1	80112086	1281
ENSMUSG00000085166	antisense	Gm15522	ENSMUST00000134467	antisense		5	1	34650718	785
ENSMUSG00000028469	protein_coding	Npr2	ENSMUST00000123351	protein_coding		4	1	43641262	526
ENSMUSG00000049721	protein_coding	Gal3st1	ENSMUST00000063004	protein_coding	principal1	11	1	3983713	1879
ENSMUSG00000109593	lincRNA	Gm45431	ENSMUST00000210143	lincRNA		8	-1	80138667	588
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000208196	retained_intron		7	-1	89972298	703
ENSMUSG00000086795	lincRNA	Gm11579	ENSMUST00000145502	lincRNA		1	-1	60781834	845
ENSMUSG00000028469	protein_coding	Npr2	ENSMUST00000128549	protein_coding		4	1	43641284	2106
ENSMUSG00000092281	processed_pseudogene	Hmgb1-ps7	ENSMUST00000173370	processed_pseudogene		7	1	42020836	648
ENSMUSG00000073436	protein_coding	Eme2	ENSMUST00000121542	protein_coding	principal1	17	-1	24895087	1521
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000172777	processed_transcript		17	1	34982159	653
ENSMUSG00000028469	protein_coding	Npr2	ENSMUST00000145817	processed_transcript		4	1	43644136	871
ENSMUSG00000078198	protein_coding	Olfr364-ps1	ENSMUST00000217298	protein_coding	principal1	2	1	37139327	2894
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000208977	protein_coding		7	-1	89980976	1111
ENSMUSG00000028469	protein_coding	Npr2	ENSMUST00000130093	processed_transcript		4	1	43646560	913
ENSMUSG00000075054	protein_coding	Yae1d1	ENSMUST00000099735	protein_coding	principal1	13	-1	17993349	8744
ENSMUSG00000078198	protein_coding	Olfr364-ps1	ENSMUST00000214905	protein_coding	principal1	2	1	37139322	1914
ENSMUSG00000028469	protein_coding	Npr2	ENSMUST00000143160	processed_transcript		4	1	43647197	599
ENSMUSG00000078198	protein_coding	Olfr364-ps1	ENSMUST00000104995	protein_coding	principal1	2	1	37139375	1766
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000172890	processed_transcript		17	1	34982159	687
ENSMUSG00000028469	protein_coding	Npr2	ENSMUST00000151603	processed_transcript		4	1	43648005	347
ENSMUSG00000049721	protein_coding	Gal3st1	ENSMUST00000109981	protein_coding	principal1	11	1	3989933	1600
ENSMUSG00000075054	protein_coding	Yae1d1	ENSMUST00000222796	protein_coding		13	-1	17993103	1382
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000182660	protein_coding	principal2	1	-1	162740556	11502
ENSMUSG00000110294	lincRNA	Gm45430	ENSMUST00000211276	lincRNA		8	1	80195199	260
ENSMUSG00000021835	protein_coding	Bmp4	ENSMUST00000074077	protein_coding	principal1	14	-1	46390669	2064
ENSMUSG00000075054	protein_coding	Yae1d1	ENSMUST00000222595	retained_intron		13	-1	17993328	2749
ENSMUSG00000075054	protein_coding	Yae1d1	ENSMUST00000222308	retained_intron		13	-1	17993328	1024
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000208643	processed_transcript		7	-1	89980461	528
ENSMUSG00000031591	protein_coding	Asah1	ENSMUST00000126561	retained_intron		8	-1	41350037	2154
ENSMUSG00000114077	transcribed_processed_pseudogene	Gm48776	ENSMUST00000221430	transcribed_processed_pseudogene		13	-1	17961416	565
ENSMUSG00000086043	antisense	Gm12473	ENSMUST00000137535	antisense		4	-1	43641533	579
ENSMUSG00000083620	processed_pseudogene	Gm15529	ENSMUST00000121833	processed_pseudogene		6	1	12857397	994
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000183223	protein_coding		1	-1	162704766	5448
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000207568	retained_intron		7	-1	89980555	491
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000173004	protein_coding		17	1	34982159	870
ENSMUSG00000031591	protein_coding	Asah1	ENSMUST00000131796	retained_intron		8	-1	41343856	884
ENSMUSG00000108050	TEC	Gm44472	ENSMUST00000204922	TEC		6	1	12917525	943
ENSMUSG00000021835	protein_coding	Bmp4	ENSMUST00000100676	protein_coding	principal1	14	-1	46390550	1633
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000157001	retained_intron		7	-1	89980559	454
ENSMUSG00000030619	protein_coding	Eed	ENSMUST00000238981	protein_coding	principal1	7	-1	89980976	2060
ENSMUSG00000021835	protein_coding	Bmp4	ENSMUST00000226759	retained_intron		14	-1	46387304	258
ENSMUSG00000095358	protein_coding	Vmn1r165	ENSMUST00000179594	protein_coding	principal1	7	1	23217332	924
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000174860	retained_intron		17	1	34982169	691
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000174434	retained_intron		17	1	34982209	528
ENSMUSG00000101198	lincRNA	Gm29021	ENSMUST00000185451	lincRNA		Y	-1	27358781	1498
ENSMUSG00000021835	protein_coding	Bmp4	ENSMUST00000135408	retained_intron		14	-1	46390535	517
ENSMUSG00000030427	protein_coding	Lilra6	ENSMUST00000038176	protein_coding	principal1	7	-1	3915485	2103
ENSMUSG00000079261	protein_coding	Gm15217	ENSMUST00000141358	protein_coding	alternative2	14	1	46379414	347
ENSMUSG00000092462	unprocessed_pseudogene	Vmn1r-ps83	ENSMUST00000172677	unprocessed_pseudogene		7	-1	23229758	705
ENSMUSG00000101198	lincRNA	Gm29021	ENSMUST00000190966	lincRNA		Y	-1	27358328	617
ENSMUSG00000063683	protein_coding	Glyat	ENSMUST00000044976	protein_coding	principal1	19	1	12633308	2822
ENSMUSG00000101198	lincRNA	Gm29021	ENSMUST00000190839	lincRNA		Y	-1	27358328	433
ENSMUSG00000096073	protein_coding	Vmn1r166	ENSMUST00000164045	protein_coding	principal1	7	-1	23251682	921
ENSMUSG00000030427	protein_coding	Lilra6	ENSMUST00000206851	retained_intron		7	-1	3915485	2548
ENSMUSG00000090026	antisense	Gm15996	ENSMUST00000161925	antisense		12	-1	111731831	762
ENSMUSG00000084170	processed_pseudogene	Gm11954	ENSMUST00000121403	processed_pseudogene		11	1	4002457	349
ENSMUSG00000030427	protein_coding	Lilra6	ENSMUST00000090689	protein_coding		7	-1	3915503	1977
ENSMUSG00000090193	processed_transcript	Gm15995	ENSMUST00000159897	processed_transcript		12	1	111726392	574
ENSMUSG00000079261	protein_coding	Gm15217	ENSMUST00000111826	protein_coding	principal5	14	1	46379467	733
ENSMUSG00000028563	protein_coding	Tm2d1	ENSMUST00000102793	protein_coding	principal1	4	-1	98383306	1027
ENSMUSG00000107035	processed_pseudogene	Ybx1-ps2	ENSMUST00000201305	processed_pseudogene		6	-1	37687195	957
ENSMUSG00000098052	processed_pseudogene	Gm5300	ENSMUST00000182201	processed_pseudogene		6	-1	13056597	1003
ENSMUSG00000074417	protein_coding	Gm14548	ENSMUST00000070639	protein_coding	principal1	7	-1	3898120	2128
ENSMUSG00000007050	protein_coding	Lsm2	ENSMUST00000172666	retained_intron		17	1	34984608	1066
ENSMUSG00000028577	protein_coding	Plaa	ENSMUST00000107107	protein_coding	principal1	4	-1	94603244	2784
ENSMUSG00000074064	protein_coding	Mlycd	ENSMUST00000098367	protein_coding	principal1	8	1	119394878	2128
ENSMUSG00000063683	protein_coding	Glyat	ENSMUST00000155846	processed_transcript		19	1	12633515	778
ENSMUSG00000073436	protein_coding	Eme2	ENSMUST00000139754	nonsense_mediated_decay		17	-1	24895059	1575
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000182393	protein_coding		1	-1	162705192	6367
ENSMUSG00000079261	protein_coding	Gm15217	ENSMUST00000147092	processed_transcript		14	1	46381127	285
ENSMUSG00000031591	protein_coding	Asah1	ENSMUST00000110417	nonsense_mediated_decay		8	-1	41374635	764
ENSMUSG00000080242	processed_pseudogene	Atp6v0c-ps2	ENSMUST00000122373	processed_pseudogene		6	1	37806086	465
ENSMUSG00000099955	lincRNA	Gm28880	ENSMUST00000190161	lincRNA		Y	1	27393538	2160
ENSMUSG00000073436	protein_coding	Eme2	ENSMUST00000156659	retained_intron		17	-1	24895078	805
ENSMUSG00000086746	antisense	Gm15222	ENSMUST00000127359	antisense		14	1	46387519	344
ENSMUSG00000028563	protein_coding	Tm2d1	ENSMUST00000030292	protein_coding		4	-1	98383246	952
ENSMUSG00000109024	processed_pseudogene	Gm18063	ENSMUST00000208529	processed_pseudogene		7	1	23270729	568
ENSMUSG00000099873	unprocessed_pseudogene	Gm28452	ENSMUST00000186623	unprocessed_pseudogene		Y	1	27434899	696
ENSMUSG00000086746	antisense	Gm15222	ENSMUST00000228667	antisense		14	1	46387553	1726
ENSMUSG00000028563	protein_coding	Tm2d1	ENSMUST00000107051	protein_coding		4	-1	98383060	813
ENSMUSG00000106853	processed_pseudogene	Gm7492	ENSMUST00000201745	processed_pseudogene		6	-1	37866564	725
ENSMUSG00000031591	protein_coding	Asah1	ENSMUST00000143057	protein_coding		8	-1	41374773	433
ENSMUSG00000073436	protein_coding	Eme2	ENSMUST00000145882	retained_intron		17	-1	24894185	615
ENSMUSG00000074064	protein_coding	Mlycd	ENSMUST00000145121	retained_intron		8	1	119394898	2933
ENSMUSG00000033917	protein_coding	Gde1	ENSMUST00000038791	protein_coding	principal1	7	-1	118705778	1582
ENSMUSG00000028563	protein_coding	Tm2d1	ENSMUST00000143116	protein_coding		4	-1	98383232	517
ENSMUSG00000063683	protein_coding	Glyat	ENSMUST00000157069	retained_intron		19	1	12633515	803
ENSMUSG00000073436	protein_coding	Eme2	ENSMUST00000140688	retained_intron		17	-1	24895055	779
ENSMUSG00000028563	protein_coding	Tm2d1	ENSMUST00000125034	nonsense_mediated_decay		4	-1	98375028	624
ENSMUSG00000028577	protein_coding	Plaa	ENSMUST00000136669	processed_transcript		4	-1	94603135	1514
ENSMUSG00000105111	processed_pseudogene	Gm43310	ENSMUST00000198975	processed_pseudogene		12	-1	113173306	820
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000182593	protein_coding	alternative2	1	-1	162740481	9022
ENSMUSG00000073436	protein_coding	Eme2	ENSMUST00000127293	retained_intron		17	-1	24895062	752
ENSMUSG00000094682	protein_coding	Gm6902	ENSMUST00000191169	protein_coding	principal1	7	-1	23278900	1581
ENSMUSG00000063683	protein_coding	Glyat	ENSMUST00000119960	protein_coding		19	1	12633533	3296
ENSMUSG00000033917	protein_coding	Gde1	ENSMUST00000132509	protein_coding		7	-1	118705380	737
ENSMUSG00000046259	protein_coding	Sprr2h	ENSMUST00000059845	protein_coding	principal1	3	1	92385685	752
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000028016	protein_coding	alternative2	1	-1	162740550	8815
ENSMUSG00000073436	protein_coding	Eme2	ENSMUST00000128953	retained_intron		17	-1	24895025	818
ENSMUSG00000028577	protein_coding	Plaa	ENSMUST00000129748	processed_transcript		4	-1	94576388	3886
ENSMUSG00000063683	protein_coding	Glyat	ENSMUST00000123173	processed_transcript		19	1	12639492	690
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000182535	retained_intron		1	-1	162688189	593
ENSMUSG00000028577	protein_coding	Plaa	ENSMUST00000146118	processed_transcript		4	-1	94603181	693
ENSMUSG00000094682	protein_coding	Gm6902	ENSMUST00000179072	protein_coding	principal1	7	-1	23275243	1335
ENSMUSG00000084116	processed_pseudogene	Gm12460	ENSMUST00000117147	processed_pseudogene		4	1	51190107	357
ENSMUSG00000046259	protein_coding	Sprr2h	ENSMUST00000191886	protein_coding		3	1	92385700	297
ENSMUSG00000028577	protein_coding	Plaa	ENSMUST00000127656	protein_coding		4	-1	94583498	641
ENSMUSG00000022231	protein_coding	Sema5a	ENSMUST00000226876	retained_intron		15	1	32244810	2375
ENSMUSG00000033917	protein_coding	Gde1	ENSMUST00000208040	nonsense_mediated_decay		7	-1	118705748	923
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000183011	protein_coding		1	-1	162740404	1827
ENSMUSG00000028577	protein_coding	Plaa	ENSMUST00000135696	processed_transcript		4	-1	94583477	645
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000182448	retained_intron		1	-1	162714016	1215
ENSMUSG00000033917	protein_coding	Gde1	ENSMUST00000207323	protein_coding		7	-1	118705760	433
ENSMUSG00000098205	processed_pseudogene	Gm9149	ENSMUST00000182724	processed_pseudogene		7	1	32604815	1007
ENSMUSG00000027253	protein_coding	Lrp4	ENSMUST00000028689	protein_coding	principal1	2	1	91457511	7926
ENSMUSG00000037379	protein_coding	Spon2	ENSMUST00000200884	retained_intron		5	-1	33215949	1271
ENSMUSG00000049411	protein_coding	Tmem241	ENSMUST00000055447	protein_coding		18	-1	12121514	2597
ENSMUSG00000051896	protein_coding	Tex37	ENSMUST00000063456	protein_coding	principal1	6	-1	70918927	814
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000182288	retained_intron		1	-1	162740497	1342
ENSMUSG00000101312	processed_pseudogene	Gm21135	ENSMUST00000189023	processed_pseudogene		7	1	32622259	436
ENSMUSG00000109357	TEC	Gm45236	ENSMUST00000208632	TEC		7	1	118688545	229
ENSMUSG00000042826	protein_coding	Fgf11	ENSMUST00000011285	protein_coding		11	-1	69801716	2534
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000182331	protein_coding		1	-1	162740350	670
ENSMUSG00000099932	unprocessed_pseudogene	Scgb2b14-ps	ENSMUST00000189424	unprocessed_pseudogene		7	-1	32649799	336
ENSMUSG00000099905	unprocessed_pseudogene	Scgb1b14-ps	ENSMUST00000188286	unprocessed_pseudogene		7	1	32656765	275
ENSMUSG00000079697	protein_coding	Gm5751	ENSMUST00000115561	protein_coding	principal1	X	1	8874253	444
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000182308	retained_intron		1	-1	162724868	548
ENSMUSG00000100613	processed_pseudogene	Gm5058	ENSMUST00000187331	processed_pseudogene		7	-1	32704939	463
ENSMUSG00000055874	protein_coding	Foxi3	ENSMUST00000163089	protein_coding	alternative2	6	1	70956531	1278
ENSMUSG00000100577	processed_pseudogene	Gm29429	ENSMUST00000187071	processed_pseudogene		7	1	32705029	121
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000193937	retained_intron		1	-1	162730721	2105
ENSMUSG00000100903	unprocessed_pseudogene	Scgb2b31-ps	ENSMUST00000188734	unprocessed_pseudogene		7	-1	32747062	328
ENSMUSG00000040225	protein_coding	Prrc2c	ENSMUST00000183286	processed_transcript		1	-1	162740487	342
ENSMUSG00000055874	protein_coding	Foxi3	ENSMUST00000069634	protein_coding	principal2	6	1	70956606	1206
ENSMUSG00000081450	processed_pseudogene	Gm11700	ENSMUST00000119409	processed_pseudogene		2	1	144355917	403
ENSMUSG00000103412	TEC	Gm37340	ENSMUST00000193124	TEC		2	1	6940625	759
ENSMUSG00000029614	protein_coding	Rpl6	ENSMUST00000031617	protein_coding	principal1	5	1	121204481	1270
ENSMUSG00000049411	protein_coding	Tmem241	ENSMUST00000211298	nonsense_mediated_decay		18	-1	12121530	2653
ENSMUSG00000042942	protein_coding	Greb1l	ENSMUST00000048977	protein_coding	principal1	18	1	10325179	8420
ENSMUSG00000107446	TEC	Gm43906	ENSMUST00000203194	TEC		6	-1	71106511	906
ENSMUSG00000042157	protein_coding	Sprr2i	ENSMUST00000047264	protein_coding	principal1	3	1	92407991	617
ENSMUSG00000087079	antisense	Gm13389	ENSMUST00000142774	antisense		2	1	6884270	639
ENSMUSG00000022867	protein_coding	Usp25	ENSMUST00000239066	protein_coding	alternative1	16	1	77013706	4986
ENSMUSG00000072575	protein_coding	Eddm3b	ENSMUST00000100645	protein_coding	principal1	14	1	51114426	1412
ENSMUSG00000022867	protein_coding	Usp25	ENSMUST00000023580	protein_coding	principal2	16	1	77013706	4776
ENSMUSG00000029614	protein_coding	Rpl6	ENSMUST00000146579	retained_intron		5	1	121204521	829
ENSMUSG00000062319	sense_intronic	Gm10115	ENSMUST00000076071	sense_intronic		2	-1	6951680	1228
ENSMUSG00000042942	protein_coding	Greb1l	ENSMUST00000172532	protein_coding		18	1	10458225	2974
ENSMUSG00000029614	protein_coding	Rpl6	ENSMUST00000197044	retained_intron		5	1	121204546	714
ENSMUSG00000049411	protein_coding	Tmem241	ENSMUST00000209859	protein_coding	principal1	18	-1	12121530	1426
ENSMUSG00000068396	processed_pseudogene	Rpl34-ps1	ENSMUST00000121998	processed_pseudogene		6	1	71124610	354
ENSMUSG00000042942	protein_coding	Greb1l	ENSMUST00000224958	processed_transcript		18	1	10476786	135
ENSMUSG00000029614	protein_coding	Rpl6	ENSMUST00000124330	retained_intron		5	1	121205409	947
ENSMUSG00000082313	processed_pseudogene	Gm11701	ENSMUST00000121277	processed_pseudogene		2	-1	144365627	1142
ENSMUSG00000029614	protein_coding	Rpl6	ENSMUST00000140515	retained_intron		5	1	121206638	411
ENSMUSG00000022867	protein_coding	Usp25	ENSMUST00000232047	retained_intron		16	1	77013787	674
ENSMUSG00000042942	protein_coding	Greb1l	ENSMUST00000174553	retained_intron		18	1	10509397	586
ENSMUSG00000027253	protein_coding	Lrp4	ENSMUST00000143874	processed_transcript		2	1	91457511	3266
ENSMUSG00000042826	protein_coding	Fgf11	ENSMUST00000102585	protein_coding	principal1	11	-1	69801857	3039
ENSMUSG00000029614	protein_coding	Rpl6	ENSMUST00000201155	nonsense_mediated_decay		5	1	121206724	486
ENSMUSG00000022867	protein_coding	Usp25	ENSMUST00000232538	retained_intron		16	1	77081502	711
ENSMUSG00000027253	protein_coding	Lrp4	ENSMUST00000123897	processed_transcript		2	1	91476256	3748
ENSMUSG00000037683	protein_coding	Armc3	ENSMUST00000114640	protein_coding		2	1	19199302	2818
ENSMUSG00000029614	protein_coding	Rpl6	ENSMUST00000139177	retained_intron		5	1	121207077	284
ENSMUSG00000022867	protein_coding	Usp25	ENSMUST00000232351	retained_intron		16	1	77083900	511
ENSMUSG00000027253	protein_coding	Lrp4	ENSMUST00000151907	processed_transcript		2	1	91476319	898
ENSMUSG00000021880	protein_coding	Rnase6	ENSMUST00000226194	protein_coding	principal1	14	1	51123908	2452
ENSMUSG00000049411	protein_coding	Tmem241	ENSMUST00000211480	retained_intron		18	-1	12113421	630
ENSMUSG00000083890	processed_pseudogene	Gm15703	ENSMUST00000120250	processed_pseudogene		16	1	31924989	880
ENSMUSG00000029614	protein_coding	Rpl6	ENSMUST00000138621	retained_intron		5	1	121208196	565
ENSMUSG00000037683	protein_coding	Armc3	ENSMUST00000049255	protein_coding	principal1	2	1	19199302	2782
ENSMUSG00000021880	protein_coding	Rnase6	ENSMUST00000226210	protein_coding		14	1	51128849	422
ENSMUSG00000098031	processed_pseudogene	Gm9341	ENSMUST00000183000	processed_pseudogene		7	1	135952798	986
ENSMUSG00000049411	protein_coding	Tmem241	ENSMUST00000210051	retained_intron		18	-1	12121537	1641
ENSMUSG00000042942	protein_coding	Greb1l	ENSMUST00000172680	nonsense_mediated_decay		18	1	10510705	2813
ENSMUSG00000028438	protein_coding	Kif24	ENSMUST00000108055	protein_coding	principal1	4	-1	41464840	5593
ENSMUSG00000021880	protein_coding	Rnase6	ENSMUST00000228752	processed_transcript		14	1	51129081	418
ENSMUSG00000116534	TEC	Gm49731	ENSMUST00000231931	TEC		16	1	31933647	1734
ENSMUSG00000049411	protein_coding	Tmem241	ENSMUST00000234833	nonsense_mediated_decay		18	-1	12121480	338
ENSMUSG00000042942	protein_coding	Greb1l	ENSMUST00000173261	processed_transcript		18	1	10553786	567
ENSMUSG00000099633	lincRNA	Gm29071	ENSMUST00000185729	lincRNA		Y	1	84907473	1488
ENSMUSG00000049411	protein_coding	Tmem241	ENSMUST00000092075	protein_coding		18	-1	12121480	595
ENSMUSG00000028438	protein_coding	Kif24	ENSMUST00000030148	protein_coding		4	-1	41464848	4333
ENSMUSG00000074419	protein_coding	Gm15448	ENSMUST00000153846	protein_coding	principal5	7	-1	3825650	2145
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000112642	protein_coding	principal1	5	-1	107875107	5849
ENSMUSG00000074419	protein_coding	Gm15448	ENSMUST00000108620	protein_coding		7	-1	3825687	1828
ENSMUSG00000021880	protein_coding	Rnase6	ENSMUST00000095923	protein_coding	principal1	14	1	51129068	1072
ENSMUSG00000099633	lincRNA	Gm29071	ENSMUST00000190261	lincRNA		Y	1	84907926	437
ENSMUSG00000108784	TEC	4930517G19Rik	ENSMUST00000206152	TEC		6	-1	91691608	1676
ENSMUSG00000090482	unprocessed_pseudogene	Gm3675	ENSMUST00000175904	unprocessed_pseudogene		7	-1	8055842	1653
ENSMUSG00000100388	lincRNA	Gm29116	ENSMUST00000189963	lincRNA		Y	1	50770044	1500
ENSMUSG00000074419	protein_coding	Gm15448	ENSMUST00000108619	protein_coding	alternative2	7	-1	3825669	2097
ENSMUSG00000108526	TEC	Gm45828	ENSMUST00000206938	TEC		6	1	91709406	1836
ENSMUSG00000091273	unprocessed_pseudogene	Gm6673	ENSMUST00000166114	unprocessed_pseudogene		5	-1	17227934	700
ENSMUSG00000091449	processed_pseudogene	Gm10269	ENSMUST00000165229	processed_pseudogene		18	-1	20682963	370
ENSMUSG00000074419	protein_coding	Gm15448	ENSMUST00000094911	protein_coding		7	-1	3825641	1557
ENSMUSG00000074419	protein_coding	Gm15448	ENSMUST00000189095	protein_coding		7	-1	3825641	1905
ENSMUSG00000100388	lincRNA	Gm29116	ENSMUST00000185583	lincRNA		Y	1	50770497	434
ENSMUSG00000102079	processed_pseudogene	Gm21879	ENSMUST00000187583	processed_pseudogene		Y	-1	85017495	696
ENSMUSG00000028438	protein_coding	Kif24	ENSMUST00000154175	processed_transcript		4	-1	41464840	1756
ENSMUSG00000028438	protein_coding	Kif24	ENSMUST00000131532	processed_transcript		4	-1	41464887	1151
ENSMUSG00000037379	protein_coding	Spon2	ENSMUST00000046186	protein_coding	principal1	5	-1	33218455	2045
ENSMUSG00000028438	protein_coding	Kif24	ENSMUST00000133497	processed_transcript		4	-1	41464846	623
ENSMUSG00000028438	protein_coding	Kif24	ENSMUST00000154535	protein_coding		4	-1	41464846	731
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000155897	retained_intron		5	-1	107809782	2149
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000136677	retained_intron		5	-1	107799546	974
ENSMUSG00000028438	protein_coding	Kif24	ENSMUST00000141951	processed_transcript		4	-1	41409778	754
ENSMUSG00000037379	protein_coding	Spon2	ENSMUST00000201199	retained_intron		5	-1	33218185	1840
ENSMUSG00000028438	protein_coding	Kif24	ENSMUST00000127376	processed_transcript		4	-1	41404786	705
ENSMUSG00000037379	protein_coding	Spon2	ENSMUST00000201175	retained_intron		5	-1	33215960	1130
ENSMUSG00000104174	TEC	Gm37701	ENSMUST00000192947	TEC		2	-1	12129742	1100
ENSMUSG00000045625	protein_coding	Pigz	ENSMUST00000052174	protein_coding	principal1	16	1	31933851	2184
ENSMUSG00000048550	protein_coding	Thnsl1	ENSMUST00000054591	protein_coding	principal1	2	1	21205724	3899
ENSMUSG00000037379	protein_coding	Spon2	ENSMUST00000201475	protein_coding		5	-1	33218195	876
ENSMUSG00000001901	protein_coding	Kcnh6	ENSMUST00000106903	protein_coding		11	1	106008124	2816
ENSMUSG00000045625	protein_coding	Pigz	ENSMUST00000151412	protein_coding		16	1	31933943	620
ENSMUSG00000037787	protein_coding	Apopt1	ENSMUST00000040519	protein_coding	principal3	12	1	111713261	1065
ENSMUSG00000020170	protein_coding	Frs2	ENSMUST00000020381	protein_coding	principal1	10	-1	117148510	6420
ENSMUSG00000045625	protein_coding	Pigz	ENSMUST00000134928	protein_coding		16	1	31933982	383
ENSMUSG00000045625	protein_coding	Pigz	ENSMUST00000134666	protein_coding		16	1	31941913	322
ENSMUSG00000048550	protein_coding	Thnsl1	ENSMUST00000102952	protein_coding		2	1	21205739	1679
ENSMUSG00000020170	protein_coding	Frs2	ENSMUST00000219483	processed_transcript		10	-1	117148495	2145
ENSMUSG00000115153	lincRNA	Gm49240	ENSMUST00000227731	lincRNA		15	-1	12196619	1187
ENSMUSG00000039555	protein_coding	Cylc2	ENSMUST00000156384	protein_coding	principal5	4	1	51216678	3311
ENSMUSG00000037787	protein_coding	Apopt1	ENSMUST00000163220	protein_coding	alternative2	12	1	111713280	671
ENSMUSG00000024400	protein_coding	Wdr33	ENSMUST00000234302	retained_intron		18	1	31804090	1756
ENSMUSG00000020170	protein_coding	Frs2	ENSMUST00000218868	processed_transcript		10	-1	117130846	497
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000128723	protein_coding		5	-1	107869168	2441
ENSMUSG00000020170	protein_coding	Frs2	ENSMUST00000219104	processed_transcript		10	-1	117148534	675
ENSMUSG00000048550	protein_coding	Thnsl1	ENSMUST00000102951	protein_coding		2	1	21205787	1707
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000124034	protein_coding		5	-1	107869168	1587
ENSMUSG00000039555	protein_coding	Cylc2	ENSMUST00000166749	protein_coding	alternative2	4	1	51216678	1297
ENSMUSG00000037787	protein_coding	Apopt1	ENSMUST00000159557	nonsense_mediated_decay		12	1	111713284	367
ENSMUSG00000035951	protein_coding	Ascl3	ENSMUST00000035372	protein_coding	principal1	7	-1	109731726	700
ENSMUSG00000001901	protein_coding	Kcnh6	ENSMUST00000001965	protein_coding	principal1	11	1	106008173	3368
ENSMUSG00000048550	protein_coding	Thnsl1	ENSMUST00000138965	protein_coding		2	1	21205759	583
ENSMUSG00000048550	protein_coding	Thnsl1	ENSMUST00000138914	protein_coding		2	1	21205773	527
ENSMUSG00000037787	protein_coding	Apopt1	ENSMUST00000162316	protein_coding		12	1	111713286	3107
ENSMUSG00000115356	processed_pseudogene	Gm2581	ENSMUST00000227208	processed_pseudogene		15	-1	12198472	171
ENSMUSG00000106050	processed_pseudogene	Ass-ps1	ENSMUST00000197717	processed_pseudogene		7	1	15906688	761
ENSMUSG00000044627	protein_coding	Swi5	ENSMUST00000113395	protein_coding	principal3	2	-1	32282864	712
ENSMUSG00000001901	protein_coding	Kcnh6	ENSMUST00000145539	nonsense_mediated_decay		11	1	106008203	2959
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000124590	retained_intron		5	-1	107816809	674
ENSMUSG00000001901	protein_coding	Kcnh6	ENSMUST00000140695	processed_transcript		11	1	106013773	633
ENSMUSG00000027864	protein_coding	Ptgfrn	ENSMUST00000102694	protein_coding	principal1	3	-1	101110278	5902
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000147307	retained_intron		6	-1	124763612	2614
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000132482	processed_transcript		5	-1	107875044	1323
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000138111	protein_coding		5	-1	107875059	1304
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000141673	retained_intron		5	-1	107837480	452
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000155955	protein_coding		5	-1	107868388	815
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000127579	processed_transcript		5	-1	107868899	526
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000133411	processed_transcript		5	-1	107875056	358
ENSMUSG00000011831	protein_coding	Evi5	ENSMUST00000132406	processed_transcript		5	-1	107875052	426
ENSMUSG00000106288	TEC	Gm43593	ENSMUST00000198605	TEC		5	-1	107807707	1346
ENSMUSG00000025155	protein_coding	Dus1l	ENSMUST00000106135	protein_coding		11	-1	120796403	1863
ENSMUSG00000083609	processed_pseudogene	Gm16007	ENSMUST00000117837	processed_pseudogene		5	1	107844390	286
ENSMUSG00000104748	TEC	Gm43592	ENSMUST00000196922	TEC		5	1	107868474	1165
ENSMUSG00000027864	protein_coding	Ptgfrn	ENSMUST00000198037	processed_transcript		3	-1	101073449	660
ENSMUSG00000027864	protein_coding	Ptgfrn	ENSMUST00000200065	retained_intron		3	-1	101078721	4786
ENSMUSG00000022231	protein_coding	Sema5a	ENSMUST00000067458	protein_coding	principal1	15	1	32244813	10809
ENSMUSG00000105717	sense_intronic	Gm43465	ENSMUST00000200367	sense_intronic		3	-1	101087393	2802
ENSMUSG00000025155	protein_coding	Dus1l	ENSMUST00000142418	retained_intron		11	-1	120790447	1039
ENSMUSG00000114985	lincRNA	1810028F09Rik	ENSMUST00000226251	lincRNA		14	-1	51144117	1248
ENSMUSG00000019792	protein_coding	Trmt11	ENSMUST00000019927	protein_coding	principal1	10	-1	30600749	2359
ENSMUSG00000040614	protein_coding	Nlrp9c	ENSMUST00000041845	protein_coding		7	-1	26394238	2631
ENSMUSG00000108616	lincRNA	Gm35040	ENSMUST00000206829	lincRNA		7	1	79536043	5094
ENSMUSG00000108373	lincRNA	Gm45168	ENSMUST00000206461	lincRNA		7	-1	79579068	1069
ENSMUSG00000108373	lincRNA	Gm45168	ENSMUST00000205591	lincRNA		7	-1	79579079	741
ENSMUSG00000096780	transcribed_unprocessed_pseudogene	Tmem181b-ps	ENSMUST00000180035	processed_transcript		17	-1	6449745	2426
ENSMUSG00000025155	protein_coding	Dus1l	ENSMUST00000026151	protein_coding		11	-1	120796395	1930
ENSMUSG00000026770	protein_coding	Il2ra	ENSMUST00000028111	protein_coding	principal1	2	1	11642807	4412
ENSMUSG00000108776	lincRNA	Gm45169	ENSMUST00000205717	lincRNA		7	-1	79592613	639
ENSMUSG00000025155	protein_coding	Dus1l	ENSMUST00000125156	retained_intron		11	-1	120789850	550
ENSMUSG00000035896	protein_coding	Rnase1	ENSMUST00000080126	protein_coding	principal1	14	-1	51146785	992
ENSMUSG00000049354	protein_coding	Dcaf7	ENSMUST00000058438	protein_coding	principal1	11	1	106036872	5750
ENSMUSG00000026770	protein_coding	Il2ra	ENSMUST00000150890	protein_coding		2	1	11642849	1013
ENSMUSG00000026770	protein_coding	Il2ra	ENSMUST00000195427	retained_intron		2	1	11679708	502
ENSMUSG00000096780	transcribed_unprocessed_pseudogene	Tmem181b-ps	ENSMUST00000190059	processed_transcript		17	-1	6449095	1859
ENSMUSG00000104101	TEC	Gm37881	ENSMUST00000193001	TEC		2	1	11683126	421
ENSMUSG00000076441	protein_coding	Ass1	ENSMUST00000102840	protein_coding	principal1	2	1	31470207	1696
ENSMUSG00000040614	protein_coding	Nlrp9c	ENSMUST00000085944	protein_coding	principal1	7	-1	26394243	3216
ENSMUSG00000059606	protein_coding	Rnase2b	ENSMUST00000075648	protein_coding	principal1	14	1	51162260	759
ENSMUSG00000049354	protein_coding	Dcaf7	ENSMUST00000106891	retained_intron		11	1	106036900	1135
ENSMUSG00000019792	protein_coding	Trmt11	ENSMUST00000215595	nonsense_mediated_decay		10	-1	30600695	1576
ENSMUSG00000115136	unprocessed_pseudogene	Ear-ps1	ENSMUST00000228894	unprocessed_pseudogene		14	-1	51168425	459
ENSMUSG00000082415	processed_pseudogene	Gm12486	ENSMUST00000120887	processed_pseudogene		3	-1	101207399	541
ENSMUSG00000085033	antisense	Gm11646	ENSMUST00000135857	antisense		11	-1	106051852	397
ENSMUSG00000020261	protein_coding	Slc36a1	ENSMUST00000108872	protein_coding	principal1	11	1	55204350	5264
ENSMUSG00000019792	protein_coding	Trmt11	ENSMUST00000215041	nonsense_mediated_decay		10	-1	30590109	715
ENSMUSG00000025155	protein_coding	Dus1l	ENSMUST00000146008	retained_intron		11	-1	120796389	3062
ENSMUSG00000110882	processed_pseudogene	Gm7642	ENSMUST00000216345	processed_pseudogene		9	1	15644283	1809
ENSMUSG00000076441	protein_coding	Ass1	ENSMUST00000126474	retained_intron		2	1	31497772	662
ENSMUSG00000040614	protein_coding	Nlrp9c	ENSMUST00000160514	processed_transcript		7	-1	26403696	1228
ENSMUSG00000110786	processed_pseudogene	Gm5119	ENSMUST00000215858	processed_pseudogene		9	1	15682902	634
ENSMUSG00000020261	protein_coding	Slc36a1	ENSMUST00000152336	processed_transcript		11	1	55204362	460
ENSMUSG00000076441	protein_coding	Ass1	ENSMUST00000192802	retained_intron		2	1	31500726	485
ENSMUSG00000019792	protein_coding	Trmt11	ENSMUST00000216790	nonsense_mediated_decay		10	-1	30600677	1921
ENSMUSG00000025155	protein_coding	Dus1l	ENSMUST00000106133	protein_coding		11	-1	120796398	1762
ENSMUSG00000040614	protein_coding	Nlrp9c	ENSMUST00000160948	retained_intron		7	-1	26403700	2979
ENSMUSG00000076441	protein_coding	Ass1	ENSMUST00000130195	retained_intron		2	1	31518490	462
ENSMUSG00000020261	protein_coding	Slc36a1	ENSMUST00000147506	protein_coding		11	1	55204374	653
ENSMUSG00000096780	transcribed_unprocessed_pseudogene	Tmem181b-ps	ENSMUST00000188746	processed_transcript		17	-1	6467022	1626
ENSMUSG00000040614	protein_coding	Nlrp9c	ENSMUST00000160277	retained_intron		7	-1	26403700	2037
ENSMUSG00000019792	protein_coding	Trmt11	ENSMUST00000216705	nonsense_mediated_decay		10	-1	30600650	666
ENSMUSG00000111788	processed_pseudogene	Gm8948	ENSMUST00000216371	processed_pseudogene		10	1	40333951	370
ENSMUSG00000025155	protein_coding	Dus1l	ENSMUST00000143139	protein_coding		11	-1	120796377	750
ENSMUSG00000020261	protein_coding	Slc36a1	ENSMUST00000108867	protein_coding	principal1	11	1	55213795	1611
ENSMUSG00000096780	transcribed_unprocessed_pseudogene	Tmem181b-ps	ENSMUST00000167717	transcribed_unprocessed_pseudogene		17	-1	6467022	1413
ENSMUSG00000019792	protein_coding	Trmt11	ENSMUST00000216638	retained_intron		10	-1	30600695	1585
ENSMUSG00000109425	processed_pseudogene	Gm18471	ENSMUST00000208272	processed_pseudogene		7	1	23283025	452
ENSMUSG00000020261	protein_coding	Slc36a1	ENSMUST00000020499	protein_coding	principal1	11	1	55204376	1950
ENSMUSG00000025155	protein_coding	Dus1l	ENSMUST00000129955	protein_coding		11	-1	120796393	964
ENSMUSG00000026247	protein_coding	Ecel1	ENSMUST00000161002	protein_coding	principal1	1	-1	87156521	3033
ENSMUSG00000044627	protein_coding	Swi5	ENSMUST00000140406	nonsense_mediated_decay		2	-1	32287935	919
ENSMUSG00000058818	protein_coding	Pirb	ENSMUST00000078451	protein_coding	principal1	7	-1	3720382	3824
ENSMUSG00000117880	antisense	Gm34517	ENSMUST00000235410	antisense		19	1	43266936	855
ENSMUSG00000044627	protein_coding	Swi5	ENSMUST00000113397	nonsense_mediated_decay		2	-1	32288005	580
ENSMUSG00000047509	processed_pseudogene	Gm6776	ENSMUST00000057752	processed_pseudogene		19	1	43280798	900
ENSMUSG00000117682	processed_pseudogene	Gm18379	ENSMUST00000236491	processed_pseudogene		19	-1	43279207	574
ENSMUSG00000025155	protein_coding	Dus1l	ENSMUST00000167023	protein_coding	principal1	11	-1	120796395	1909
ENSMUSG00000026247	protein_coding	Ecel1	ENSMUST00000160810	protein_coding	principal1	1	-1	87156165	2898
ENSMUSG00000044627	protein_coding	Swi5	ENSMUST00000050410	protein_coding	alternative2	2	-1	32288075	775
ENSMUSG00000026247	protein_coding	Ecel1	ENSMUST00000162015	retained_intron		1	-1	87148916	574
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000140433	retained_intron		10	1	81574561	3625
ENSMUSG00000044627	protein_coding	Swi5	ENSMUST00000113400	protein_coding	alternative2	2	-1	32288069	522
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000032185	protein_coding	principal1	6	1	91684053	6186
ENSMUSG00000026247	protein_coding	Ecel1	ENSMUST00000159662	processed_transcript		1	-1	87155311	191
ENSMUSG00000004296	protein_coding	Il12b	ENSMUST00000102796	protein_coding	principal1	11	1	44400063	1861
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000131794	protein_coding		10	1	81574734	357
ENSMUSG00000066306	protein_coding	Numa1	ENSMUST00000209639	protein_coding		7	1	101934111	2862
ENSMUSG00000026247	protein_coding	Ecel1	ENSMUST00000027463	protein_coding	principal1	1	-1	87155027	2695
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000205443	processed_transcript		6	1	91684069	374
ENSMUSG00000066306	protein_coding	Numa1	ENSMUST00000210679	protein_coding		7	1	101934138	722
ENSMUSG00000044627	protein_coding	Swi5	ENSMUST00000127131	retained_intron		2	-1	32288031	4511
ENSMUSG00000004296	protein_coding	Il12b	ENSMUST00000170513	protein_coding	principal1	11	1	44400063	1944
ENSMUSG00000029517	protein_coding	Ankrd7	ENSMUST00000031489	protein_coding	principal1	6	1	18866318	1190
ENSMUSG00000008601	protein_coding	Rab25	ENSMUST00000008745	protein_coding	principal1	3	-1	88548300	1081
ENSMUSG00000074852	protein_coding	Hpse2	ENSMUST00000099428	protein_coding	principal1	19	-1	43388355	4231
ENSMUSG00000031021	protein_coding	Tmem9b	ENSMUST00000033333	protein_coding	principal2	7	-1	109752279	1703
ENSMUSG00000022231	protein_coding	Sema5a	ENSMUST00000228442	retained_intron		15	1	32244822	2571
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000206835	retained_intron		6	1	91684095	1553
ENSMUSG00000044627	protein_coding	Swi5	ENSMUST00000183946	protein_coding	principal3	2	-1	32288068	768
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000205480	protein_coding		6	1	91684120	691
ENSMUSG00000008601	protein_coding	Rab25	ENSMUST00000131775	protein_coding		3	-1	88548249	897
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000206545	protein_coding		6	1	91684128	557
ENSMUSG00000031021	protein_coding	Tmem9b	ENSMUST00000118571	protein_coding	alternative1	7	-1	109752875	1771
ENSMUSG00000087365	processed_transcript	C430049B03Rik	ENSMUST00000155622	processed_transcript		X	-1	53057190	773
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000206451	retained_intron		6	1	91684149	481
ENSMUSG00000022231	protein_coding	Sema5a	ENSMUST00000228103	processed_transcript		15	1	32244824	902
ENSMUSG00000008601	protein_coding	Rab25	ENSMUST00000141371	retained_intron		3	-1	88543514	301
ENSMUSG00000029517	protein_coding	Ankrd7	ENSMUST00000115396	protein_coding		6	1	18866350	1157
ENSMUSG00000031021	protein_coding	Tmem9b	ENSMUST00000128043	protein_coding		7	-1	109752246	353
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000205828	protein_coding		6	1	91701657	431
ENSMUSG00000087365	processed_transcript	C430049B03Rik	ENSMUST00000129764	processed_transcript		X	-1	53057160	868
ENSMUSG00000044441	protein_coding	Olfr1442	ENSMUST00000207341	protein_coding	principal1	19	1	12670439	3126
ENSMUSG00000109147	transcribed_processed_pseudogene	4930431P19Rik	ENSMUST00000207761	processed_transcript		7	1	109752320	2959
ENSMUSG00000008601	protein_coding	Rab25	ENSMUST00000149724	retained_intron		3	-1	88548282	865
ENSMUSG00000022231	protein_coding	Sema5a	ENSMUST00000228555	retained_intron		15	1	32244825	5442
ENSMUSG00000109147	transcribed_processed_pseudogene	4930431P19Rik	ENSMUST00000207570	transcribed_processed_pseudogene		7	1	109754582	451
ENSMUSG00000087365	processed_transcript	C430049B03Rik	ENSMUST00000152109	processed_transcript		X	-1	53057188	698
ENSMUSG00000044441	protein_coding	Olfr1442	ENSMUST00000208494	protein_coding	principal1	19	1	12670456	3593
ENSMUSG00000074852	protein_coding	Hpse2	ENSMUST00000238153	retained_intron		19	-1	43223689	1100
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000205663	nonsense_mediated_decay		6	1	91724959	738
ENSMUSG00000087365	processed_transcript	C430049B03Rik	ENSMUST00000151099	processed_transcript		X	-1	53057190	770
ENSMUSG00000111949	processed_pseudogene	Gm48679	ENSMUST00000219639	processed_pseudogene		10	1	11505296	402
ENSMUSG00000074852	protein_coding	Hpse2	ENSMUST00000236823	processed_transcript		19	-1	43388254	397
ENSMUSG00000044441	protein_coding	Olfr1442	ENSMUST00000208657	protein_coding	principal1	19	1	12670574	3148
ENSMUSG00000116560	unprocessed_pseudogene	Gm2808	ENSMUST00000231996	unprocessed_pseudogene		17	-1	6528713	3159
ENSMUSG00000044441	protein_coding	Olfr1442	ENSMUST00000057924	protein_coding	principal1	19	1	12674179	1065
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000205764	retained_intron		6	1	91739649	510
ENSMUSG00000019836	processed_pseudogene	Amd-ps4	ENSMUST00000118392	processed_pseudogene		4	-1	51254027	1003
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000205477	retained_intron		6	1	91748356	559
ENSMUSG00000030096	protein_coding	Slc6a6	ENSMUST00000206988	retained_intron		6	1	91750184	682
ENSMUSG00000081050	processed_pseudogene	Gm12461	ENSMUST00000120231	processed_pseudogene		4	1	51892893	1239
ENSMUSG00000108574	TEC	Gm44981	ENSMUST00000205549	TEC		6	-1	91713278	1943
ENSMUSG00000022832	protein_coding	Ropn1	ENSMUST00000148562	protein_coding		16	1	34649921	575
ENSMUSG00000109309	unprocessed_pseudogene	Gm49772	ENSMUST00000208407	unprocessed_pseudogene		19	1	12681771	145
ENSMUSG00000041431	protein_coding	Ccnb1	ENSMUST00000072119	protein_coding	principal2	13	-1	100786570	2489
ENSMUSG00000029699	protein_coding	Ssc4d	ENSMUST00000111153	protein_coding	principal1	5	-1	135974531	2745
ENSMUSG00000022832	protein_coding	Ropn1	ENSMUST00000023530	protein_coding	principal1	16	1	34651188	875
ENSMUSG00000041431	protein_coding	Ccnb1	ENSMUST00000091295	protein_coding	alternative2	13	-1	100786486	2140
ENSMUSG00000045030	protein_coding	Olfr1443	ENSMUST00000213486	nonsense_mediated_decay		19	1	12678112	2944
ENSMUSG00000022832	protein_coding	Ropn1	ENSMUST00000231612	processed_transcript		16	1	34666317	1147
ENSMUSG00000041431	protein_coding	Ccnb1	ENSMUST00000147790	retained_intron		13	-1	100781453	2471
ENSMUSG00000029189	protein_coding	Sel1l3	ENSMUST00000031090	protein_coding	principal1	5	-1	53213452	4512
ENSMUSG00000035910	protein_coding	Dcdc2a	ENSMUST00000036932	protein_coding		13	1	25056004	2345
ENSMUSG00000117871	lincRNA	Gm50287	ENSMUST00000235250	lincRNA		19	-1	58096031	2491
ENSMUSG00000014748	protein_coding	Tex261	ENSMUST00000014892	protein_coding	principal1	6	-1	83775813	2984
ENSMUSG00000058818	protein_coding	Pirb	ENSMUST00000136238	retained_intron		7	-1	3720391	2579
ENSMUSG00000104488	TEC	Gm38062	ENSMUST00000192541	TEC		1	-1	80730664	1856
ENSMUSG00000041431	protein_coding	Ccnb1	ENSMUST00000134080	retained_intron		13	-1	100782033	1075
ENSMUSG00000106251	sense_intronic	Gm42658	ENSMUST00000197199	sense_intronic		3	-1	104827904	1575
ENSMUSG00000041431	protein_coding	Ccnb1	ENSMUST00000174038	protein_coding		13	-1	100786402	1182
ENSMUSG00000022231	protein_coding	Sema5a	ENSMUST00000228015	retained_intron		15	1	32244831	3951
ENSMUSG00000106105	processed_pseudogene	Gm4525	ENSMUST00000198831	processed_pseudogene		3	-1	104916163	254
ENSMUSG00000045030	protein_coding	Olfr1443	ENSMUST00000215134	protein_coding	principal1	19	1	12678123	3995
ENSMUSG00000104231	antisense	Gm37592	ENSMUST00000192741	antisense		3	-1	32512344	373
ENSMUSG00000022231	protein_coding	Sema5a	ENSMUST00000227802	retained_intron		15	1	32245038	3158
ENSMUSG00000029699	protein_coding	Ssc4d	ENSMUST00000111152	protein_coding	principal1	5	-1	135974497	2745
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000199186	retained_intron		3	1	104864005	2455
ENSMUSG00000014748	protein_coding	Tex261	ENSMUST00000125614	retained_intron		6	-1	83775790	2265
ENSMUSG00000041431	protein_coding	Ccnb1	ENSMUST00000128279	retained_intron		13	-1	100785603	751
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000028911	protein_coding	principal1	2	1	144368983	3801
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000136341	protein_coding		10	1	81574739	663
ENSMUSG00000045030	protein_coding	Olfr1443	ENSMUST00000049724	protein_coding	principal1	19	1	12678166	4343
ENSMUSG00000027306	protein_coding	Nusap1	ENSMUST00000068225	protein_coding	principal3	2	1	119618298	2960
ENSMUSG00000014748	protein_coding	Tex261	ENSMUST00000137773	retained_intron		6	-1	83772475	454
ENSMUSG00000041431	protein_coding	Ccnb1	ENSMUST00000142056	retained_intron		13	-1	100786475	461
ENSMUSG00000058818	protein_coding	Pirb	ENSMUST00000155131	retained_intron		7	-1	3720362	3314
ENSMUSG00000014748	protein_coding	Tex261	ENSMUST00000138192	retained_intron		6	-1	83775758	442
ENSMUSG00000029189	protein_coding	Sel1l3	ENSMUST00000196435	retained_intron		5	-1	53213315	2369
ENSMUSG00000027306	protein_coding	Nusap1	ENSMUST00000153036	processed_transcript		2	1	119618694	312
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000171261	processed_transcript		2	1	144368988	562
ENSMUSG00000029189	protein_coding	Sel1l3	ENSMUST00000196516	retained_intron		5	-1	53156680	3371
ENSMUSG00000031065	protein_coding	Cdk16	ENSMUST00000115364	protein_coding		X	1	20687954	3270
ENSMUSG00000029189	protein_coding	Sel1l3	ENSMUST00000196550	processed_transcript		5	-1	53173112	664
ENSMUSG00000035910	protein_coding	Dcdc2a	ENSMUST00000069614	protein_coding	principal1	13	1	25056253	6634
ENSMUSG00000029699	protein_coding	Ssc4d	ENSMUST00000054895	protein_coding		5	-1	135962327	1191
ENSMUSG00000085515	lincRNA	C630028M04Rik	ENSMUST00000141452	lincRNA		4	-1	52051110	3387
ENSMUSG00000049036	protein_coding	Tmem121	ENSMUST00000058491	protein_coding	principal1	12	1	113185930	1574
ENSMUSG00000042305	protein_coding	Tmem183a	ENSMUST00000049470	protein_coding	principal1	1	-1	134361979	3149
ENSMUSG00000058818	protein_coding	Pirb	ENSMUST00000129493	retained_intron		7	-1	3720382	2923
ENSMUSG00000029189	protein_coding	Sel1l3	ENSMUST00000199919	retained_intron		5	-1	53213927	2441
ENSMUSG00000031065	protein_coding	Cdk16	ENSMUST00000132365	processed_transcript		X	1	20687999	797
ENSMUSG00000082494	processed_pseudogene	Gm13687	ENSMUST00000119857	processed_pseudogene		2	1	80499230	282
ENSMUSG00000097952	processed_pseudogene	Gm4398	ENSMUST00000182698	processed_pseudogene		7	1	32791496	992
ENSMUSG00000027306	protein_coding	Nusap1	ENSMUST00000028771	protein_coding	alternative2	2	1	119618717	3526
ENSMUSG00000058818	protein_coding	Pirb	ENSMUST00000137474	retained_intron		7	-1	3720354	2360
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000129798	retained_intron		10	1	81575260	4388
ENSMUSG00000029699	protein_coding	Ssc4d	ENSMUST00000111150	protein_coding		5	-1	135962271	459
ENSMUSG00000066306	protein_coding	Numa1	ENSMUST00000084852	protein_coding	principal1	7	1	101969821	7180
ENSMUSG00000074418	unprocessed_pseudogene	Gm15930	ENSMUST00000156603	unprocessed_pseudogene		7	-1	3764030	2037
ENSMUSG00000042305	protein_coding	Tmem183a	ENSMUST00000191237	nonsense_mediated_decay		1	-1	134361941	1689
ENSMUSG00000035910	protein_coding	Dcdc2a	ENSMUST00000159129	processed_transcript		13	1	25096347	678
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000147747	protein_coding		2	1	144368999	3299
ENSMUSG00000042305	protein_coding	Tmem183a	ENSMUST00000189572	retained_intron		1	-1	134350305	508
ENSMUSG00000029699	protein_coding	Ssc4d	ENSMUST00000153823	protein_coding		5	-1	135965874	498
ENSMUSG00000022231	protein_coding	Sema5a	ENSMUST00000227976	retained_intron		15	1	32245103	3725
ENSMUSG00000080917	unprocessed_pseudogene	Gm15925	ENSMUST00000120641	unprocessed_pseudogene		7	-1	3799631	1881
ENSMUSG00000035910	protein_coding	Dcdc2a	ENSMUST00000160363	processed_transcript		13	1	25187454	661
ENSMUSG00000029699	protein_coding	Ssc4d	ENSMUST00000154696	protein_coding		5	-1	135967920	348
ENSMUSG00000066306	protein_coding	Numa1	ENSMUST00000210475	protein_coding		7	1	101970180	3450
ENSMUSG00000082667	processed_pseudogene	Gm11348	ENSMUST00000118813	processed_pseudogene		13	-1	25131064	318
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000021306	protein_coding	principal1	11	-1	102880967	3324
ENSMUSG00000027306	protein_coding	Nusap1	ENSMUST00000125491	processed_transcript		2	1	119618729	557
ENSMUSG00000113066	unprocessed_pseudogene	Gm47217	ENSMUST00000222890	unprocessed_pseudogene		13	-1	34963060	159
ENSMUSG00000098209	processed_pseudogene	Gm8245	ENSMUST00000182434	processed_pseudogene		13	1	34940643	987
ENSMUSG00000042305	protein_coding	Tmem183a	ENSMUST00000188205	retained_intron		1	-1	134361953	725
ENSMUSG00000066306	protein_coding	Numa1	ENSMUST00000211272	protein_coding		7	1	101970739	739
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000156410	nonsense_mediated_decay		2	1	144373803	453
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000112476	protein_coding		6	-1	124769621	2386
ENSMUSG00000029699	protein_coding	Ssc4d	ENSMUST00000154181	protein_coding		5	-1	135974440	819
ENSMUSG00000042305	protein_coding	Tmem183a	ENSMUST00000185903	protein_coding		1	-1	134361690	334
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000131836	processed_transcript		2	1	144375387	478
ENSMUSG00000066306	protein_coding	Numa1	ENSMUST00000163183	protein_coding		7	1	102001165	2934
ENSMUSG00000072980	protein_coding	Oip5	ENSMUST00000110805	retained_intron		2	-1	119618469	1778
ENSMUSG00000095079	IG_C_gene	Igha	ENSMUST00000194738	IG_C_gene	principal5	12	-1	113260236	2540
ENSMUSG00000109325	processed_pseudogene	Krt8-ps	ENSMUST00000208495	processed_pseudogene		7	1	23357125	945
ENSMUSG00000066306	protein_coding	Numa1	ENSMUST00000210353	retained_intron		7	1	102001305	646
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000130654	processed_transcript		2	1	144375852	504
ENSMUSG00000020609	protein_coding	Apob	ENSMUST00000171271	protein_coding		12	1	7977648	1118
ENSMUSG00000095079	IG_C_gene	Igha	ENSMUST00000178282	IG_C_gene	alternative2	12	-1	113260236	1100
ENSMUSG00000066306	protein_coding	Numa1	ENSMUST00000209583	retained_intron		7	1	102001415	582
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000143318	retained_intron		2	1	144388975	567
ENSMUSG00000081528	processed_pseudogene	Gm12924	ENSMUST00000121747	processed_pseudogene		4	1	123435617	318
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000137611	processed_transcript		2	1	144388989	435
ENSMUSG00000081585	processed_pseudogene	Gm12926	ENSMUST00000121158	processed_pseudogene		4	1	123630295	409
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000107060	protein_coding		11	-1	102880985	3339
ENSMUSG00000026768	protein_coding	Itga8	ENSMUST00000028106	protein_coding	principal1	2	-1	12301922	5812
ENSMUSG00000087307	antisense	Gm12925	ENSMUST00000140510	antisense		4	1	123665881	665
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000148500	retained_intron		2	1	144402347	1468
ENSMUSG00000087307	antisense	Gm12925	ENSMUST00000130791	antisense		4	1	123667454	678
ENSMUSG00000087307	antisense	Gm12925	ENSMUST00000138861	antisense		4	1	123667616	431
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000125398	protein_coding		2	1	144402547	379
ENSMUSG00000031065	protein_coding	Cdk16	ENSMUST00000033380	protein_coding	principal1	X	1	20688418	3120
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000172611	protein_coding		11	-1	102844218	397
ENSMUSG00000022231	protein_coding	Sema5a	ENSMUST00000227429	processed_transcript		15	1	32601675	2774
ENSMUSG00000027425	protein_coding	Kat14	ENSMUST00000139812	protein_coding		2	1	144404078	566
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000173679	protein_coding		11	-1	102877714	2889
ENSMUSG00000118295	transcribed_processed_pseudogene	Gm8437	ENSMUST00000235710	transcribed_processed_pseudogene		17	-1	31294203	889
ENSMUSG00000115063	antisense	4930465K09Rik	ENSMUST00000227807	antisense		15	-1	32623505	527
ENSMUSG00000098387	protein_coding	Pet117	ENSMUST00000183618	protein_coding	principal1	2	1	144368996	693
ENSMUSG00000031065	protein_coding	Cdk16	ENSMUST00000146259	retained_intron		X	1	20694283	968
ENSMUSG00000031065	protein_coding	Cdk16	ENSMUST00000122944	retained_intron		X	1	20695861	420
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000132543	nonsense_mediated_decay		11	-1	102841238	567
ENSMUSG00000047894	protein_coding	Ang2	ENSMUST00000228835	protein_coding	principal1	14	-1	51199148	896
ENSMUSG00000118295	transcribed_processed_pseudogene	Gm8437	ENSMUST00000236752	processed_transcript		17	-1	31296689	2938
ENSMUSG00000026768	protein_coding	Itga8	ENSMUST00000172791	nonsense_mediated_decay		2	-1	12301892	4948
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000004378	protein_coding	principal1	6	-1	124769673	2795
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000143323	retained_intron		11	-1	102840675	631
ENSMUSG00000026768	protein_coding	Itga8	ENSMUST00000148055	protein_coding		2	-1	12132552	491
ENSMUSG00000047894	protein_coding	Ang2	ENSMUST00000051274	protein_coding	principal1	14	-1	51195923	438
ENSMUSG00000021415	protein_coding	4933417A18Rik	ENSMUST00000160279	protein_coding	principal1	13	1	34924409	1045
ENSMUSG00000072980	protein_coding	Oip5	ENSMUST00000123818	protein_coding	principal1	2	-1	119618469	1082
ENSMUSG00000026768	protein_coding	Itga8	ENSMUST00000129370	retained_intron		2	-1	12193312	488
ENSMUSG00000021415	protein_coding	4933417A18Rik	ENSMUST00000160905	nonsense_mediated_decay		13	1	34924409	1172
ENSMUSG00000031065	protein_coding	Cdk16	ENSMUST00000125035	retained_intron		X	1	20696018	871
ENSMUSG00000110396	lincRNA	Gm36737	ENSMUST00000209653	lincRNA		7	-1	136173296	2189
ENSMUSG00000026768	protein_coding	Itga8	ENSMUST00000172716	processed_transcript		2	-1	12242464	924
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000141273	retained_intron		11	-1	102847979	934
ENSMUSG00000031065	protein_coding	Cdk16	ENSMUST00000148757	retained_intron		X	1	20696405	598
ENSMUSG00000045693	protein_coding	Nlrp4e	ENSMUST00000076470	protein_coding	principal1	7	1	23301192	3382
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000131678	retained_intron		11	-1	102860221	629
ENSMUSG00000031065	protein_coding	Cdk16	ENSMUST00000129914	processed_transcript		X	1	20696445	799
ENSMUSG00000045693	protein_coding	Nlrp4e	ENSMUST00000133392	processed_transcript		7	1	23355000	619
ENSMUSG00000026768	protein_coding	Itga8	ENSMUST00000141477	retained_intron		2	-1	12301922	1265
ENSMUSG00000026768	protein_coding	Itga8	ENSMUST00000130548	processed_transcript		2	-1	12301588	885
ENSMUSG00000111080	lincRNA	Gm20300	ENSMUST00000214634	lincRNA		10	-1	30606634	3440
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000138483	nonsense_mediated_decay		11	-1	102877690	679
ENSMUSG00000086843	antisense	E030013I19Rik	ENSMUST00000148089	antisense		2	1	12300946	2754
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000173974	retained_intron		11	-1	102865969	1326
ENSMUSG00000031568	protein_coding	Rwdd4a	ENSMUST00000175692	nonsense_mediated_decay		8	1	47533664	1371
ENSMUSG00000086843	antisense	E030013I19Rik	ENSMUST00000150037	antisense		2	1	12301319	2700
ENSMUSG00000027667	protein_coding	Zfp639	ENSMUST00000193287	protein_coding	principal1	3	1	32510259	2211
ENSMUSG00000027189	protein_coding	Trim44	ENSMUST00000102573	protein_coding	principal1	2	-1	102400900	5612
ENSMUSG00000027667	protein_coding	Zfp639	ENSMUST00000191783	protein_coding	principal1	3	1	32510535	1988
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000123833	retained_intron		11	-1	102880964	3288
ENSMUSG00000027189	protein_coding	Trim44	ENSMUST00000152929	protein_coding		2	-1	102400257	516
ENSMUSG00000027667	protein_coding	Zfp639	ENSMUST00000193119	protein_coding		3	1	32510664	643
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000147368	retained_intron		11	-1	102877715	581
ENSMUSG00000027189	protein_coding	Trim44	ENSMUST00000144110	protein_coding		2	-1	102407828	325
ENSMUSG00000027667	protein_coding	Zfp639	ENSMUST00000194821	processed_transcript		3	1	32510896	486
ENSMUSG00000020929	protein_coding	Eftud2	ENSMUST00000148209	retained_intron		11	-1	102880935	796
ENSMUSG00000083306	processed_pseudogene	Gm13868	ENSMUST00000122411	processed_pseudogene		2	-1	102312207	294
ENSMUSG00000089942	protein_coding	Pira2	ENSMUST00000108615	protein_coding	principal2	7	-1	3845051	3462
ENSMUSG00000028246	protein_coding	Faxc	ENSMUST00000124440	processed_transcript		4	1	21931329	1603
ENSMUSG00000048830	protein_coding	2310057N15Rik	ENSMUST00000054223	protein_coding	principal1	16	-1	88774206	1028
ENSMUSG00000089942	protein_coding	Pira2	ENSMUST00000119469	protein_coding	alternative2	7	-1	3845051	2021
ENSMUSG00000048978	protein_coding	Nrsn1	ENSMUST00000057866	protein_coding	principal1	13	-1	25270082	2222
ENSMUSG00000086329	processed_transcript	Gm14233	ENSMUST00000149576	processed_transcript		2	1	131298545	439
ENSMUSG00000009047	protein_coding	Gm5965	ENSMUST00000238221	protein_coding	principal1	16	1	88777896	833
ENSMUSG00000027667	protein_coding	Zfp639	ENSMUST00000194126	retained_intron		3	1	32512178	3175
ENSMUSG00000027667	protein_coding	Zfp639	ENSMUST00000192985	protein_coding		3	1	32513000	547
ENSMUSG00000009047	protein_coding	Gm5965	ENSMUST00000009191	protein_coding		16	1	88777896	588
ENSMUSG00000048978	protein_coding	Nrsn1	ENSMUST00000156448	processed_transcript		13	-1	25262682	672
ENSMUSG00000070427	protein_coding	Il18bp	ENSMUST00000209844	protein_coding	principal2	7	-1	102018155	1594
ENSMUSG00000048978	protein_coding	Nrsn1	ENSMUST00000226054	processed_transcript		13	-1	25269970	319
ENSMUSG00000027667	protein_coding	Zfp639	ENSMUST00000193789	protein_coding		3	1	32517080	715
ENSMUSG00000027667	protein_coding	Zfp639	ENSMUST00000193290	retained_intron		3	1	32518799	475
ENSMUSG00000074420	transcribed_unprocessed_pseudogene	Gm10693	ENSMUST00000205904	retained_intron		7	-1	3869152	4007
ENSMUSG00000070427	protein_coding	Il18bp	ENSMUST00000094134	protein_coding	principal2	7	-1	102018197	1311
ENSMUSG00000048978	protein_coding	Nrsn1	ENSMUST00000126348	processed_transcript		13	-1	25270502	368
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000125436	retained_intron		6	-1	124768337	2491
ENSMUSG00000027667	protein_coding	Zfp639	ENSMUST00000029203	protein_coding	principal1	3	1	32515295	1458
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000204896	protein_coding		6	-1	124769520	1640
ENSMUSG00000074420	transcribed_unprocessed_pseudogene	Gm10693	ENSMUST00000144146	transcribed_unprocessed_pseudogene		7	-1	3869170	2037
ENSMUSG00000116983	lincRNA	4930553J12Rik	ENSMUST00000232467	lincRNA		16	1	88798892	953
ENSMUSG00000070427	protein_coding	Il18bp	ENSMUST00000209368	protein_coding	alternative2	7	-1	102018690	2596
ENSMUSG00000048978	protein_coding	Nrsn1	ENSMUST00000167305	protein_coding	principal1	13	-1	25262685	1891
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000139763	retained_intron		6	-1	124763286	898
ENSMUSG00000070427	protein_coding	Il18bp	ENSMUST00000211502	protein_coding		7	-1	102018159	498
ENSMUSG00000022931	protein_coding	Krtap15	ENSMUST00000187823	protein_coding		16	1	88828994	851
ENSMUSG00000104901	TEC	Gm42692	ENSMUST00000199482	TEC		3	1	34643264	2833
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000146712	retained_intron		6	-1	124763322	632
ENSMUSG00000114427	TEC	F830002E08Rik	ENSMUST00000223668	TEC		13	-1	25430127	1959
ENSMUSG00000110287	processed_pseudogene	Gm45313	ENSMUST00000210584	processed_pseudogene		7	-1	101980260	178
ENSMUSG00000083919	processed_pseudogene	Tpi-rs8	ENSMUST00000120382	processed_pseudogene		13	1	25455722	708
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000128598	processed_transcript		6	-1	124763921	716
ENSMUSG00000024400	protein_coding	Wdr33	ENSMUST00000082319	protein_coding		18	1	31804090	1115
ENSMUSG00000109872	processed_pseudogene	Gm45312	ENSMUST00000210566	processed_pseudogene		7	-1	101957285	311
ENSMUSG00000022931	protein_coding	Krtap15	ENSMUST00000023648	protein_coding	principal1	16	1	88820215	381
ENSMUSG00000080840	processed_pseudogene	Gm11349	ENSMUST00000122209	processed_pseudogene		13	-1	25583386	1116
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000138770	nonsense_mediated_decay		6	-1	124768330	616
ENSMUSG00000110150	processed_pseudogene	Gm8523	ENSMUST00000211386	processed_pseudogene		7	-1	101946513	552
ENSMUSG00000099437	lincRNA	Gm29135	ENSMUST00000188411	lincRNA		3	-1	34482207	612
ENSMUSG00000105739	processed_pseudogene	Gm5708	ENSMUST00000196289	processed_pseudogene		3	1	34183307	886
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000135626	protein_coding		6	-1	124768376	419
ENSMUSG00000031568	protein_coding	Rwdd4a	ENSMUST00000033973	protein_coding	principal1	8	1	47533664	2921
ENSMUSG00000074928	protein_coding	Krtap14	ENSMUST00000189774	protein_coding	principal1	16	-1	88826145	856
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000151214	nonsense_mediated_decay		6	-1	124769484	745
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000127274	nonsense_mediated_decay		6	-1	124768331	565
ENSMUSG00000108635	antisense	Gm44633	ENSMUST00000205925	antisense		7	-1	96818306	439
ENSMUSG00000074928	protein_coding	Krtap14	ENSMUST00000099562	protein_coding		16	-1	88825822	216
ENSMUSG00000021416	protein_coding	Eci3	ENSMUST00000021853	protein_coding	principal1	13	-1	34963810	1347
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000114100	protein_coding	alternative2	2	-1	26389291	2099
ENSMUSG00000116636	protein_coding	Gm20741	ENSMUST00000232664	protein_coding	principal1	16	-1	88812220	781
ENSMUSG00000074637	protein_coding	Sox2	ENSMUST00000099151	protein_coding	principal1	3	1	34650405	2057
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000149652	protein_coding		6	-1	124769550	804
ENSMUSG00000024400	protein_coding	Wdr33	ENSMUST00000234957	protein_coding		18	1	31804093	1415
ENSMUSG00000031568	protein_coding	Rwdd4a	ENSMUST00000176379	protein_coding		8	1	47533686	497
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000128701	retained_intron		6	-1	124768337	728
ENSMUSG00000028246	protein_coding	Faxc	ENSMUST00000029908	protein_coding	principal1	4	1	21931331	2627
ENSMUSG00000053049	antisense	Gm15413	ENSMUST00000155101	antisense		7	-1	96801549	1935
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000147004	retained_intron		6	-1	124769516	490
ENSMUSG00000091987	protein_coding	Gm10352	ENSMUST00000187842	protein_coding	principal1	Y	1	2900989	1576
ENSMUSG00000108528	processed_pseudogene	Gm8319	ENSMUST00000205708	processed_pseudogene		7	-1	96203536	641
ENSMUSG00000060691	protein_coding	Krtap19-1	ENSMUST00000081334	protein_coding	principal1	16	-1	88869411	495
ENSMUSG00000021416	protein_coding	Eci3	ENSMUST00000164155	protein_coding		13	-1	34963788	907
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000198032	retained_intron		3	1	34104270	2695
ENSMUSG00000031568	protein_coding	Rwdd4a	ENSMUST00000177215	processed_transcript		8	1	47547908	663
ENSMUSG00000031568	protein_coding	Rwdd4a	ENSMUST00000183107	retained_intron		8	1	47550458	2498
ENSMUSG00000085443	antisense	Gm15416	ENSMUST00000131080	antisense		7	-1	96817485	442
ENSMUSG00000091987	protein_coding	Gm10352	ENSMUST00000166474	protein_coding	principal1	Y	1	2904133	1482
ENSMUSG00000022833	protein_coding	Ccdc14	ENSMUST00000231364	retained_intron		16	1	34690616	4601
ENSMUSG00000028246	protein_coding	Faxc	ENSMUST00000123319	processed_transcript		4	1	21931333	2819
ENSMUSG00000004267	protein_coding	Eno2	ENSMUST00000156033	protein_coding		6	-1	124769486	622
ENSMUSG00000099549	processed_pseudogene	Gm29432	ENSMUST00000185397	processed_pseudogene		7	-1	32806273	139
ENSMUSG00000085792	antisense	Gm15414	ENSMUST00000155217	antisense		7	-1	96629069	440
ENSMUSG00000099728	processed_pseudogene	Gm8510	ENSMUST00000189202	processed_pseudogene		Y	1	2927358	895
ENSMUSG00000022833	protein_coding	Ccdc14	ENSMUST00000232489	retained_intron		16	1	34690710	3156
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000077983	protein_coding	alternative2	2	-1	26389297	1955
ENSMUSG00000086302	lincRNA	Gm13790	ENSMUST00000156209	lincRNA		5	1	114551289	473
ENSMUSG00000028246	protein_coding	Faxc	ENSMUST00000123481	processed_transcript		4	1	21931357	4465
ENSMUSG00000057650	protein_coding	Krtap19-2	ENSMUST00000076186	protein_coding	principal1	16	-1	88874269	643
ENSMUSG00000085560	processed_transcript	C230038L03Rik	ENSMUST00000136294	antisense		7	-1	96947034	1197
ENSMUSG00000101667	protein_coding	Gm29289	ENSMUST00000188358	protein_coding	principal1	Y	1	2932582	576
ENSMUSG00000028246	protein_coding	Faxc	ENSMUST00000155220	processed_transcript		4	1	21958456	1868
ENSMUSG00000085560	processed_transcript	C230038L03Rik	ENSMUST00000149463	processed_transcript		7	-1	96950140	425
ENSMUSG00000085560	processed_transcript	C230038L03Rik	ENSMUST00000129409	antisense		7	-1	96951480	2632
ENSMUSG00000060469	protein_coding	Krtap19-3	ENSMUST00000075284	protein_coding	principal1	16	-1	88878038	526
ENSMUSG00000085560	processed_transcript	C230038L03Rik	ENSMUST00000137923	antisense		7	-1	96951886	2550
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000196793	sense_overlapping		3	1	34104438	348
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000196243	sense_overlapping		3	1	34104458	639
ENSMUSG00000106508	TEC	4933425M03Rik	ENSMUST00000195991	TEC		3	1	85887691	1544
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000135211	protein_coding	alternative2	10	1	81575262	2746
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000196058	sense_overlapping		3	1	34196751	753
ENSMUSG00000085751	antisense	Gm15412	ENSMUST00000137193	antisense		7	-1	96341964	1096
ENSMUSG00000107628	processed_pseudogene	Gm44282	ENSMUST00000203199	processed_pseudogene		6	1	47585216	190
ENSMUSG00000101782	lincRNA	Gm28964	ENSMUST00000186771	lincRNA		Y	1	57125046	1502
ENSMUSG00000082780	processed_pseudogene	Rps11-ps5	ENSMUST00000117302	processed_pseudogene		7	-1	96436017	472
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000200625	sense_overlapping		3	1	34196864	685
ENSMUSG00000101782	lincRNA	Gm28964	ENSMUST00000185396	lincRNA		Y	1	57125499	438
ENSMUSG00000043982	protein_coding	Krtap19-4	ENSMUST00000051103	protein_coding	principal1	16	-1	88885089	304
ENSMUSG00000103993	processed_pseudogene	Gm38030	ENSMUST00000192376	processed_pseudogene		3	1	85914643	475
ENSMUSG00000054843	protein_coding	Atrnl1	ENSMUST00000077282	protein_coding	principal1	19	1	57611034	6586
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000237389	protein_coding		17	1	31286792	619
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000146916	protein_coding		10	1	81575331	2546
ENSMUSG00000020609	protein_coding	Apob	ENSMUST00000037811	protein_coding	principal1	12	1	7977648	13934
ENSMUSG00000051802	protein_coding	Krtap19-5	ENSMUST00000053460	protein_coding	principal1	16	-1	88896457	490
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000136254	retained_intron		10	1	81575417	2735
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000200414	sense_overlapping		3	1	34560328	710
ENSMUSG00000059429	protein_coding	Olfr365	ENSMUST00000213969	protein_coding	principal1	2	1	37188198	5333
ENSMUSG00000033847	protein_coding	Pla2g4c	ENSMUST00000167232	protein_coding	alternative2	7	1	13324655	2154
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000143285	protein_coding		10	1	81575499	630
ENSMUSG00000059429	protein_coding	Olfr365	ENSMUST00000218602	protein_coding	principal1	2	1	37190274	5374
ENSMUSG00000059429	protein_coding	Olfr365	ENSMUST00000074168	protein_coding	principal1	2	1	37201243	939
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000028293	protein_coding	alternative2	2	-1	26389304	2031
ENSMUSG00000069565	protein_coding	Dazap1	ENSMUST00000156935	protein_coding		10	1	80261486	598
ENSMUSG00000033847	protein_coding	Pla2g4c	ENSMUST00000108257	processed_transcript		7	1	13328691	401
ENSMUSG00000053263	processed_transcript	Gm12592	ENSMUST00000155332	processed_transcript		11	-1	3331178	2954
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000114102	protein_coding	principal3	2	-1	26389316	2193
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000142561	processed_transcript		11	1	3288874	798
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000197977	sense_overlapping		3	1	34560381	2970
ENSMUSG00000054128	protein_coding	H2-T3	ENSMUST00000025312	protein_coding		17	-1	36190220	2114
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000198170	sense_overlapping		3	1	34560388	441
ENSMUSG00000024943	protein_coding	Smc5	ENSMUST00000087556	protein_coding	alternative2	19	-1	23273818	5683
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000146358	protein_coding	principal3	10	1	81575532	2749
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000196795	sense_overlapping		3	1	34560392	754
ENSMUSG00000055184	protein_coding	Fam72a	ENSMUST00000068613	protein_coding	principal1	1	1	131527903	2191
ENSMUSG00000020609	protein_coding	Apob	ENSMUST00000037520	protein_coding		12	1	7977779	13369
ENSMUSG00000033847	protein_coding	Pla2g4c	ENSMUST00000043612	protein_coding	principal3	7	1	13329318	3382
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000196987	sense_overlapping		3	1	34589952	727
ENSMUSG00000024400	protein_coding	Wdr33	ENSMUST00000025264	protein_coding	principal1	18	1	31804098	4575
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000196850	sense_overlapping		3	1	34637169	2705
ENSMUSG00000020609	protein_coding	Apob	ENSMUST00000171239	protein_coding		12	1	8012359	2174
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000145878	retained_intron		10	1	81580834	757
ENSMUSG00000112151	lincRNA	Gm48680	ENSMUST00000218979	lincRNA		10	1	11580086	267
ENSMUSG00000044330	processed_pseudogene	Gm9790	ENSMUST00000054148	processed_pseudogene		3	1	85915783	288
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000197103	sense_overlapping		3	1	34638174	802
ENSMUSG00000022833	protein_coding	Ccdc14	ENSMUST00000231609	protein_coding	alternative2	16	1	34690732	3999
ENSMUSG00000024400	protein_coding	Wdr33	ENSMUST00000234344	protein_coding		18	1	31804176	2416
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000151470	retained_intron		10	1	81582543	578
ENSMUSG00000022833	protein_coding	Ccdc14	ENSMUST00000232341	retained_intron		16	1	34704043	4100
ENSMUSG00000048643	processed_pseudogene	Krtap19-9a	ENSMUST00000062005	processed_pseudogene		16	-1	88924219	166
ENSMUSG00000079263	protein_coding	Gm6614	ENSMUST00000181791	protein_coding	principal2	6	-1	142011414	2450
ENSMUSG00000024400	protein_coding	Wdr33	ENSMUST00000234137	retained_intron		18	1	31882142	3683
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000141913	retained_intron		10	1	81587092	782
ENSMUSG00000100802	unprocessed_pseudogene	Gm20889	ENSMUST00000185749	unprocessed_pseudogene		Y	-1	50880859	696
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000199171	sense_overlapping		3	1	34638252	3486
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000132574	processed_transcript		2	-1	26387581	2095
ENSMUSG00000024400	protein_coding	Wdr33	ENSMUST00000234937	retained_intron		18	1	31903917	608
ENSMUSG00000079263	protein_coding	Gm6614	ENSMUST00000181628	protein_coding	alternative2	6	-1	142011414	2364
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000200092	sense_overlapping		3	1	34638297	767
ENSMUSG00000079263	protein_coding	Gm6614	ENSMUST00000111832	protein_coding	principal2	6	-1	142008745	1953
ENSMUSG00000091561	processed_pseudogene	Gm6665	ENSMUST00000165131	processed_pseudogene		18	-1	31820519	658
ENSMUSG00000022833	protein_coding	Ccdc14	ENSMUST00000023532	protein_coding	principal2	16	1	34690616	4107
ENSMUSG00000057174	protein_coding	Krtap19-9b	ENSMUST00000077715	protein_coding	principal1	16	-1	88932265	462
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000197258	sense_overlapping		3	1	34638504	624
ENSMUSG00000101752	unprocessed_pseudogene	Gm20887	ENSMUST00000188597	unprocessed_pseudogene		Y	-1	50955531	696
ENSMUSG00000024943	protein_coding	Smc5	ENSMUST00000223934	protein_coding	principal2	19	-1	23273897	3448
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000134737	processed_transcript		2	-1	26385213	672
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000139135	retained_intron		10	1	81587426	950
ENSMUSG00000111455	unprocessed_pseudogene	Olfr1142-ps1	ENSMUST00000213624	unprocessed_pseudogene		2	1	87786027	805
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000124854	protein_coding		10	1	81587969	402
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000131411	protein_coding		10	1	81587999	500
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000136972	processed_transcript		2	-1	26385609	403
ENSMUSG00000045455	transcribed_processed_pseudogene	Gm9797	ENSMUST00000052902	processed_transcript		10	1	11609223	613
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000198758	sense_overlapping		3	1	34656036	1286
ENSMUSG00000033847	protein_coding	Pla2g4c	ENSMUST00000108528	protein_coding	alternative2	7	1	13325667	3390
ENSMUSG00000045455	transcribed_processed_pseudogene	Gm9797	ENSMUST00000218003	transcribed_processed_pseudogene		10	1	11609298	294
ENSMUSG00000034771	protein_coding	Tle2	ENSMUST00000153812	retained_intron		10	1	81588641	933
ENSMUSG00000106819	processed_pseudogene	Gm43498	ENSMUST00000202002	processed_pseudogene		6	1	18882711	1486
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000197697	sense_overlapping		3	1	34665243	2533
ENSMUSG00000098110	processed_pseudogene	Gm26956	ENSMUST00000182176	processed_pseudogene		13	1	11939558	986
ENSMUSG00000105265	processed_transcript	Sox2ot	ENSMUST00000184564	misc_RNA		3	1	34560716	67
ENSMUSG00000024943	protein_coding	Smc5	ENSMUST00000226111	protein_coding		19	-1	23272599	3265
ENSMUSG00000074547	processed_pseudogene	Rps8-ps4	ENSMUST00000092523	processed_pseudogene		7	-1	13333257	612
ENSMUSG00000068815	protein_coding	Olfr1143	ENSMUST00000111568	protein_coding	principal1	2	1	87800592	1970
ENSMUSG00000111995	lincRNA	Gm48697	ENSMUST00000217771	lincRNA		10	-1	11841931	3607
ENSMUSG00000068815	protein_coding	Olfr1143	ENSMUST00000099852	protein_coding	principal1	2	1	87800592	2028
ENSMUSG00000112233	processed_pseudogene	Gm48698	ENSMUST00000219464	processed_pseudogene		10	-1	11838895	273
ENSMUSG00000100449	unprocessed_pseudogene	Gm28757	ENSMUST00000186638	unprocessed_pseudogene		Y	-1	85087347	696
ENSMUSG00000090034	antisense	Gm15917	ENSMUST00000162771	antisense		10	-1	81575940	487
ENSMUSG00000024943	protein_coding	Smc5	ENSMUST00000224008	retained_intron		19	-1	23214941	518
ENSMUSG00000068815	protein_coding	Olfr1143	ENSMUST00000090708	protein_coding		2	1	87802391	945
ENSMUSG00000112947	TEC	Gm47493	ENSMUST00000220599	TEC		13	-1	12052055	4714
ENSMUSG00000105222	lincRNA	Gm42205	ENSMUST00000199244	lincRNA		3	-1	34602248	804
ENSMUSG00000024943	protein_coding	Smc5	ENSMUST00000224441	retained_intron		19	-1	23215802	654
ENSMUSG00000024943	protein_coding	Smc5	ENSMUST00000224723	retained_intron		19	-1	23263866	289
ENSMUSG00000105577	lincRNA	Gm34599	ENSMUST00000198924	lincRNA		3	1	34416495	288
ENSMUSG00000092242	lincRNA	Gm20515	ENSMUST00000174440	lincRNA		3	-1	34435097	4824
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000130954	processed_transcript		2	-1	26389283	1221
ENSMUSG00000007209	protein_coding	Ceacam9	ENSMUST00000001984	protein_coding	principal1	7	1	16721929	1396
ENSMUSG00000105284	TEC	Gm42693	ENSMUST00000196779	TEC		3	-1	34664289	631
ENSMUSG00000106525	lincRNA	Gm42695	ENSMUST00000199445	lincRNA		3	-1	34572202	818
ENSMUSG00000007209	protein_coding	Ceacam9	ENSMUST00000206252	protein_coding		7	1	16721958	464
ENSMUSG00000112326	unprocessed_pseudogene	Gm19624	ENSMUST00000218949	unprocessed_pseudogene		10	1	85829742	218
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000101644	processed_transcript		11	1	3289167	1853
ENSMUSG00000054128	protein_coding	H2-T3	ENSMUST00000102675	protein_coding	principal1	17	-1	36190287	2312
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000144396	processed_transcript		11	1	3289202	844
ENSMUSG00000092196	lincRNA	Gm38505	ENSMUST00000174005	lincRNA		3	-1	34351712	1326
ENSMUSG00000026849	protein_coding	Tor1a	ENSMUST00000028200	protein_coding	principal1	2	-1	30967933	1401
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000133737	processed_transcript		2	-1	26389306	1150
ENSMUSG00000051839	protein_coding	Gypa	ENSMUST00000063359	protein_coding	principal1	8	1	80493781	1848
ENSMUSG00000026849	protein_coding	Tor1a	ENSMUST00000137694	retained_intron		2	-1	30967872	1605
ENSMUSG00000083815	processed_pseudogene	Gm13435	ENSMUST00000120111	processed_pseudogene		2	1	37207051	1023
ENSMUSG00000026849	protein_coding	Tor1a	ENSMUST00000144152	retained_intron		2	-1	30963848	560
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000140115	processed_transcript		2	-1	26389295	806
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000139738	protein_coding		2	-1	26388694	432
ENSMUSG00000026849	protein_coding	Tor1a	ENSMUST00000123762	retained_intron		2	-1	30963875	455
ENSMUSG00000068947	protein_coding	Olfr366	ENSMUST00000214897	protein_coding	principal1	2	1	37211574	5333
ENSMUSG00000026849	protein_coding	Tor1a	ENSMUST00000143199	retained_intron		2	-1	30967888	660
ENSMUSG00000068947	protein_coding	Olfr366	ENSMUST00000091001	protein_coding	principal1	2	1	37219491	930
ENSMUSG00000099821	processed_pseudogene	Gm28408	ENSMUST00000191557	processed_pseudogene		7	1	32806369	463
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000137814	processed_transcript		2	-1	26389267	723
ENSMUSG00000026927	protein_coding	Entr1	ENSMUST00000140074	processed_transcript		2	-1	26389165	366
ENSMUSG00000054128	protein_coding	H2-T3	ENSMUST00000173577	retained_intron		17	-1	36190251	2268
ENSMUSG00000001785	protein_coding	Pwp1	ENSMUST00000217667	protein_coding		10	1	85829494	697
ENSMUSG00000054128	protein_coding	H2-T3	ENSMUST00000173133	nonsense_mediated_decay		17	-1	36190134	1896
ENSMUSG00000097972	protein_coding	Scgb2b15	ENSMUST00000182975	protein_coding	principal1	7	-1	32829662	434
ENSMUSG00000097972	protein_coding	Scgb2b15	ENSMUST00000183050	nonsense_mediated_decay		7	-1	32829653	491
ENSMUSG00000054128	protein_coding	H2-T3	ENSMUST00000173435	retained_intron		17	-1	36190122	1323
ENSMUSG00000034151	protein_coding	Zbbx	ENSMUST00000107778	protein_coding	principal3	3	-1	75143772	2467
ENSMUSG00000028850	protein_coding	Gpatch3	ENSMUST00000030662	protein_coding	principal1	4	1	133574745	2004
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000106769	protein_coding		3	1	104864503	2428
ENSMUSG00000039953	protein_coding	Clstn1	ENSMUST00000105691	protein_coding	alternative2	4	1	149586468	4459
ENSMUSG00000008822	protein_coding	Acyp1	ENSMUST00000008966	protein_coding	principal1	12	-1	85280435	648
ENSMUSG00000034151	protein_coding	Zbbx	ENSMUST00000039269	protein_coding	alternative2	3	-1	75143730	2399
ENSMUSG00000056124	protein_coding	B4galt6	ENSMUST00000070080	protein_coding	principal1	18	-1	20746404	5808
ENSMUSG00000090293	antisense	Gm17034	ENSMUST00000168990	antisense		6	1	82764282	2229
ENSMUSG00000054128	protein_coding	H2-T3	ENSMUST00000173629	nonsense_mediated_decay		17	-1	36190122	1200
ENSMUSG00000028850	protein_coding	Gpatch3	ENSMUST00000154648	processed_transcript		4	1	133579704	468
ENSMUSG00000034151	protein_coding	Zbbx	ENSMUST00000107776	protein_coding	alternative2	3	-1	75143703	1978
ENSMUSG00000024116	protein_coding	Prss21	ENSMUST00000024928	protein_coding	principal1	17	1	23868056	1094
ENSMUSG00000034151	protein_coding	Zbbx	ENSMUST00000107775	protein_coding	alternative2	3	-1	75143772	1447
ENSMUSG00000054128	protein_coding	H2-T3	ENSMUST00000172663	nonsense_mediated_decay		17	-1	36190122	1217
ENSMUSG00000008822	protein_coding	Acyp1	ENSMUST00000117138	protein_coding	principal1	12	-1	85280306	735
ENSMUSG00000054128	protein_coding	H2-T3	ENSMUST00000097329	protein_coding		17	-1	36190122	205
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000139494	protein_coding		2	1	32287384	705
ENSMUSG00000024116	protein_coding	Prss21	ENSMUST00000235013	retained_intron		17	1	23871244	1601
ENSMUSG00000039953	protein_coding	Clstn1	ENSMUST00000039144	protein_coding	principal3	4	1	149586638	3319
ENSMUSG00000054128	protein_coding	H2-T3	ENSMUST00000174101	nonsense_mediated_decay		17	-1	36190122	659
ENSMUSG00000054128	protein_coding	H2-T3	ENSMUST00000095300	nonsense_mediated_decay		17	-1	36190122	674
ENSMUSG00000008822	protein_coding	Acyp1	ENSMUST00000121930	protein_coding		12	-1	85288438	634
ENSMUSG00000034151	protein_coding	Zbbx	ENSMUST00000124618	protein_coding		3	-1	75165034	714
ENSMUSG00000087674	lincRNA	4930447M23Rik	ENSMUST00000141289	lincRNA		2	1	19344317	1483
ENSMUSG00000039953	protein_coding	Clstn1	ENSMUST00000137232	processed_transcript		4	1	149587248	358
ENSMUSG00000008822	protein_coding	Acyp1	ENSMUST00000065913	protein_coding		12	-1	85280418	448
ENSMUSG00000087674	lincRNA	4930447M23Rik	ENSMUST00000150514	lincRNA		2	1	19344838	664
ENSMUSG00000050766	protein_coding	Ear14	ENSMUST00000228064	protein_coding	principal1	14	1	51203391	948
ENSMUSG00000045064	protein_coding	Zc2hc1c	ENSMUST00000239335	protein_coding		12	1	85274286	1480
ENSMUSG00000087674	lincRNA	4930447M23Rik	ENSMUST00000136456	lincRNA		2	1	19344937	777
ENSMUSG00000047586	protein_coding	Nccrp1	ENSMUST00000239002	protein_coding	alternative2	7	-1	28547254	1531
ENSMUSG00000047586	protein_coding	Nccrp1	ENSMUST00000057974	protein_coding	principal2	7	-1	28547254	1531
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000059271	protein_coding	principal3	3	1	104864503	5728
ENSMUSG00000039953	protein_coding	Clstn1	ENSMUST00000151895	retained_intron		4	1	149627130	822
ENSMUSG00000050766	protein_coding	Ear14	ENSMUST00000049559	protein_coding		14	1	51203689	468
ENSMUSG00000045064	protein_coding	Zc2hc1c	ENSMUST00000239352	processed_transcript		12	1	85274339	618
ENSMUSG00000110027	lincRNA	C030029H02Rik	ENSMUST00000210438	lincRNA		7	1	136268324	2281
ENSMUSG00000101990	unprocessed_pseudogene	Gm20856	ENSMUST00000186896	unprocessed_pseudogene		Y	-1	85168797	696
ENSMUSG00000109201	unprocessed_pseudogene	Gm6518	ENSMUST00000208450	unprocessed_pseudogene		7	-1	28477852	342
ENSMUSG00000083546	processed_pseudogene	Tpt1-ps1	ENSMUST00000120257	processed_pseudogene		3	1	101233460	436
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000200132	protein_coding	alternative2	3	1	104865067	2636
ENSMUSG00000101958	processed_pseudogene	Gm19085	ENSMUST00000188924	processed_pseudogene		1	-1	91490009	2162
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000182996	protein_coding		14	1	21481434	606
ENSMUSG00000100757	processed_pseudogene	Gm29613	ENSMUST00000185846	processed_pseudogene		Y	-1	61771683	313
ENSMUSG00000110027	lincRNA	C030029H02Rik	ENSMUST00000210356	lincRNA		7	1	136268332	2980
ENSMUSG00000099642	lincRNA	Gm28348	ENSMUST00000187833	lincRNA		Y	1	85185081	397
ENSMUSG00000110027	lincRNA	C030029H02Rik	ENSMUST00000210209	lincRNA		7	1	136268334	635
ENSMUSG00000048911	protein_coding	Rnf24	ENSMUST00000059372	protein_coding	principal1	2	-1	131352881	5978
ENSMUSG00000109792	TEC	Gm45426	ENSMUST00000209393	TEC		7	1	136288656	3672
ENSMUSG00000045064	protein_coding	Zc2hc1c	ENSMUST00000059341	protein_coding	principal1	12	1	85288591	4482
ENSMUSG00000099574	lincRNA	1700121L03Rik	ENSMUST00000187796	lincRNA		1	-1	125197455	704
ENSMUSG00000047222	protein_coding	Rnase2a	ENSMUST00000061936	protein_coding	principal1	14	-1	51256112	690
ENSMUSG00000092308	unprocessed_pseudogene	Gm3623	ENSMUST00000173643	unprocessed_pseudogene		7	-1	9350502	2747
ENSMUSG00000048911	protein_coding	Rnf24	ENSMUST00000110194	protein_coding	principal1	2	-1	131328988	5944
ENSMUSG00000024772	protein_coding	Ehd1	ENSMUST00000025684	protein_coding	principal1	19	1	6276725	3353
ENSMUSG00000100606	lincRNA	Gm29612	ENSMUST00000191490	lincRNA		Y	-1	61776445	2168
ENSMUSG00000033904	protein_coding	Ccp110	ENSMUST00000106557	protein_coding	principal1	7	1	118712552	5073
ENSMUSG00000081569	processed_pseudogene	Gm12490	ENSMUST00000120255	processed_pseudogene		3	1	101260917	560
ENSMUSG00000115574	unprocessed_pseudogene	Gm49245	ENSMUST00000227528	unprocessed_pseudogene		14	1	51277602	108
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000134089	protein_coding		11	1	3289281	1904
ENSMUSG00000024772	protein_coding	Ehd1	ENSMUST00000165797	retained_intron		19	1	6276925	629
ENSMUSG00000048911	protein_coding	Rnf24	ENSMUST00000183902	nonsense_mediated_decay		2	-1	131352862	1466
ENSMUSG00000024772	protein_coding	Ehd1	ENSMUST00000171203	retained_intron		19	1	6294181	791
ENSMUSG00000099355	lincRNA	Gm29342	ENSMUST00000189689	lincRNA		Y	1	61808456	1500
ENSMUSG00000033904	protein_coding	Ccp110	ENSMUST00000123178	protein_coding		7	1	118721615	6948
ENSMUSG00000109633	lincRNA	C230079O03Rik	ENSMUST00000209560	lincRNA		7	-1	136349415	1385
ENSMUSG00000099355	lincRNA	Gm29342	ENSMUST00000188171	lincRNA		Y	1	61808909	438
ENSMUSG00000024772	protein_coding	Ehd1	ENSMUST00000148547	processed_transcript		19	1	6297914	349
ENSMUSG00000059128	protein_coding	Ifnl2	ENSMUST00000081684	protein_coding	principal1	7	-1	28510455	702
ENSMUSG00000048911	protein_coding	Rnf24	ENSMUST00000142982	retained_intron		2	-1	131352892	913
ENSMUSG00000089876	protein_coding	Tmem102	ENSMUST00000051025	protein_coding	principal1	11	-1	69805624	1933
ENSMUSG00000101170	lincRNA	Gm29343	ENSMUST00000187887	lincRNA		Y	-1	61815122	842
ENSMUSG00000071015	protein_coding	Gm136	ENSMUST00000095129	protein_coding	principal1	4	-1	34756263	1311
ENSMUSG00000048911	protein_coding	Rnf24	ENSMUST00000165420	protein_coding	principal1	2	-1	131313314	5833
ENSMUSG00000033904	protein_coding	Ccp110	ENSMUST00000149056	retained_intron		7	1	118725965	2554
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000183914	nonsense_mediated_decay		3	1	104865071	3256
ENSMUSG00000044982	protein_coding	Sft2d3	ENSMUST00000054984	protein_coding	principal1	18	-1	31911824	2727
ENSMUSG00000115540	lincRNA	4930597G03Rik	ENSMUST00000228344	lincRNA		14	-1	51345489	1140
ENSMUSG00000086912	antisense	4930505O20Rik	ENSMUST00000142188	antisense		8	-1	80514473	1758
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000123876	protein_coding		3	1	104865080	862
ENSMUSG00000109737	protein_coding	Gm39566	ENSMUST00000210714	protein_coding	principal1	11	-1	69815298	3908
ENSMUSG00000033904	protein_coding	Ccp110	ENSMUST00000208766	protein_coding		7	1	118726555	997
ENSMUSG00000110938	lincRNA	1700124M09Rik	ENSMUST00000217047	lincRNA		10	-1	19087178	305
ENSMUSG00000094991	lincRNA	Gm21718	ENSMUST00000186974	lincRNA		14	1	51311497	817
ENSMUSG00000033904	protein_coding	Ccp110	ENSMUST00000140831	retained_intron		7	1	118730251	623
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000146237	processed_transcript		3	1	104865113	691
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000197098	protein_coding		3	1	104870943	723
ENSMUSG00000117027	antisense	Gm49886	ENSMUST00000232919	antisense		17	-1	28319602	771
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000126775	processed_transcript		3	1	104870966	379
ENSMUSG00000094991	lincRNA	Gm21718	ENSMUST00000179170	lincRNA		14	1	51312848	516
ENSMUSG00000101354	unprocessed_pseudogene	Gm28973	ENSMUST00000189310	unprocessed_pseudogene		Y	-1	85198397	613
ENSMUSG00000115094	processed_pseudogene	Gm7106	ENSMUST00000228121	processed_pseudogene		14	1	51314461	468
ENSMUSG00000033904	protein_coding	Ccp110	ENSMUST00000038650	protein_coding	principal1	7	1	118715374	4716
ENSMUSG00000001785	protein_coding	Pwp1	ENSMUST00000001836	protein_coding	principal1	10	1	85871831	2572
ENSMUSG00000110770	processed_pseudogene	Tpi-rs5	ENSMUST00000216947	processed_pseudogene		10	1	19101545	774
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000199335	nonsense_mediated_decay		3	1	104882818	582
ENSMUSG00000112073	lincRNA	Gm47101	ENSMUST00000219113	lincRNA		10	1	102435269	275
ENSMUSG00000111821	lincRNA	Gm48545	ENSMUST00000217363	lincRNA		10	-1	19101595	2552
ENSMUSG00000045576	protein_coding	St7l	ENSMUST00000140457	retained_intron		3	1	104888958	4082
ENSMUSG00000098139	processed_pseudogene	Gm26988	ENSMUST00000183296	processed_pseudogene		10	1	102460198	945
ENSMUSG00000105655	sense_intronic	Gm42659	ENSMUST00000196955	sense_intronic		3	-1	104838183	1754
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000183201	processed_transcript		14	1	21481459	535
ENSMUSG00000028443	protein_coding	Nudt2	ENSMUST00000030154	protein_coding	principal1	4	1	41465151	845
ENSMUSG00000101835	unprocessed_pseudogene	Gm21734	ENSMUST00000190346	unprocessed_pseudogene		Y	-1	85235373	696
ENSMUSG00000102127	lincRNA	Gm28972	ENSMUST00000186990	lincRNA		Y	-1	85244624	2167
ENSMUSG00000111320	processed_pseudogene	Gm48546	ENSMUST00000217107	processed_pseudogene		10	1	19123207	230
ENSMUSG00000037514	protein_coding	Pank2	ENSMUST00000131779	processed_transcript		2	1	131262495	1304
ENSMUSG00000107524	TEC	Gm44136	ENSMUST00000203819	TEC		3	-1	40865053	1106
ENSMUSG00000030203	protein_coding	Dusp16	ENSMUST00000129433	protein_coding	alternative2	6	-1	134792475	3993
ENSMUSG00000089956	antisense	Gm16553	ENSMUST00000160490	antisense		8	1	3709804	716
ENSMUSG00000097583	processed_transcript	6430590A07Rik	ENSMUST00000181813	lincRNA		3	-1	40894123	1032
ENSMUSG00000097583	processed_transcript	6430590A07Rik	ENSMUST00000203407	retained_intron		3	-1	40894193	3631
ENSMUSG00000074620	processed_pseudogene	Gm10731	ENSMUST00000181171	processed_pseudogene		3	-1	40855123	448
ENSMUSG00000001785	protein_coding	Pwp1	ENSMUST00000219902	retained_intron		10	1	85871884	1247
ENSMUSG00000109336	protein_coding	Samd4b	ENSMUST00000208199	protein_coding	principal1	7	-1	28436191	4391
ENSMUSG00000003402	protein_coding	Prkcsh	ENSMUST00000216344	protein_coding	principal3	9	1	22002806	2228
ENSMUSG00000001785	protein_coding	Pwp1	ENSMUST00000219256	nonsense_mediated_decay		10	1	85871906	899
ENSMUSG00000109336	protein_coding	Samd4b	ENSMUST00000208126	protein_coding		7	-1	28404031	903
ENSMUSG00000001785	protein_coding	Pwp1	ENSMUST00000219626	retained_intron		10	1	85876254	715
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000094471	protein_coding		11	1	3289993	2930
ENSMUSG00000112836	processed_pseudogene	Gm47006	ENSMUST00000217901	processed_pseudogene		10	1	85849141	1391
ENSMUSG00000030203	protein_coding	Dusp16	ENSMUST00000100857	protein_coding	principal3	6	-1	134792625	5104
ENSMUSG00000003402	protein_coding	Prkcsh	ENSMUST00000003493	protein_coding	principal3	9	1	22003018	2012
ENSMUSG00000082227	unprocessed_pseudogene	Olfr1144-ps1	ENSMUST00000118227	unprocessed_pseudogene		2	-1	87808671	328
ENSMUSG00000023094	protein_coding	Msrb2	ENSMUST00000023856	protein_coding	principal1	2	1	19371636	1196
ENSMUSG00000074491	protein_coding	Clec4g	ENSMUST00000160527	nonsense_mediated_decay		8	-1	3717553	1442
ENSMUSG00000027863	protein_coding	Cd2	ENSMUST00000029456	protein_coding	principal1	3	-1	101287939	1153
ENSMUSG00000030203	protein_coding	Dusp16	ENSMUST00000204083	nonsense_mediated_decay		6	-1	134761100	1915
ENSMUSG00000030203	protein_coding	Dusp16	ENSMUST00000203651	retained_intron		6	-1	134726058	629
ENSMUSG00000109336	protein_coding	Samd4b	ENSMUST00000207766	nonsense_mediated_decay		7	-1	28436227	2336
ENSMUSG00000027863	protein_coding	Cd2	ENSMUST00000156103	retained_intron		3	-1	101280389	968
ENSMUSG00000109336	protein_coding	Samd4b	ENSMUST00000208676	processed_transcript		7	-1	28413907	166
ENSMUSG00000028826	protein_coding	Maco1	ENSMUST00000150031	processed_transcript		4	-1	134811213	4132
ENSMUSG00000030203	protein_coding	Dusp16	ENSMUST00000203452	processed_transcript		6	-1	134743826	553
ENSMUSG00000027863	protein_coding	Cd2	ENSMUST00000152321	retained_intron		3	-1	101287879	659
ENSMUSG00000023094	protein_coding	Msrb2	ENSMUST00000126894	processed_transcript		2	1	19371668	326
ENSMUSG00000030203	protein_coding	Dusp16	ENSMUST00000148926	nonsense_mediated_decay		6	-1	134758720	579
ENSMUSG00000020481	protein_coding	Ankrd36	ENSMUST00000109855	protein_coding	alternative2	11	1	5569697	1363
ENSMUSG00000109336	protein_coding	Samd4b	ENSMUST00000040531	protein_coding	principal1	7	-1	28598144	4349
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000110043	protein_coding	principal1	11	1	3289993	3702
ENSMUSG00000003402	protein_coding	Prkcsh	ENSMUST00000115331	protein_coding	alternative2	9	1	22003066	1983
ENSMUSG00000023094	protein_coding	Msrb2	ENSMUST00000153289	processed_transcript		2	1	19371841	417
ENSMUSG00000030203	protein_coding	Dusp16	ENSMUST00000149776	protein_coding		6	-1	134791334	3305
ENSMUSG00000023094	protein_coding	Msrb2	ENSMUST00000137812	processed_transcript		2	1	19371440	249
ENSMUSG00000075389	processed_transcript	2810410L24Rik	ENSMUST00000155681	processed_transcript		11	-1	120188751	2615
ENSMUSG00000019890	protein_coding	Nts	ENSMUST00000020040	protein_coding	principal1	10	-1	102490486	1248
ENSMUSG00000108196	antisense	Gm36328	ENSMUST00000204237	antisense		6	1	134754246	432
ENSMUSG00000099362	lincRNA	Gm28970	ENSMUST00000191098	lincRNA		Y	-1	85273114	1139
ENSMUSG00000003402	protein_coding	Prkcsh	ENSMUST00000215795	protein_coding		9	1	22003217	601
ENSMUSG00000075389	processed_transcript	2810410L24Rik	ENSMUST00000145437	processed_transcript		11	-1	120189852	646
ENSMUSG00000038722	protein_coding	Bud31	ENSMUST00000162594	protein_coding	principal1	5	1	145140362	867
ENSMUSG00000092240	processed_pseudogene	Gm4246	ENSMUST00000172822	processed_pseudogene		17	-1	36194811	216
ENSMUSG00000003402	protein_coding	Prkcsh	ENSMUST00000214565	retained_intron		9	1	22005568	2092
ENSMUSG00000038722	protein_coding	Bud31	ENSMUST00000160004	retained_intron		5	1	145140396	405
ENSMUSG00000115280	processed_pseudogene	Gm7107	ENSMUST00000228571	processed_pseudogene		14	1	51358603	1362
ENSMUSG00000087103	antisense	Gm13344	ENSMUST00000137714	antisense		2	-1	19431983	1557
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000057089	protein_coding		11	1	3290439	3118
ENSMUSG00000109733	lincRNA	Gm33940	ENSMUST00000209205	lincRNA		2	1	19428046	1601
ENSMUSG00000115206	transcribed_processed_pseudogene	Gm49286	ENSMUST00000228184	transcribed_processed_pseudogene		15	-1	3992095	102
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000186100	nonsense_mediated_decay		10	1	20312472	3231
ENSMUSG00000099921	lincRNA	Gm28971	ENSMUST00000187506	lincRNA		Y	1	85305105	1498
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000093402	protein_coding		11	1	3290457	3173
ENSMUSG00000099921	lincRNA	Gm28971	ENSMUST00000189585	lincRNA		Y	1	85305558	433
ENSMUSG00000038722	protein_coding	Bud31	ENSMUST00000162308	protein_coding		5	1	145140397	705
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000123983	processed_transcript		11	1	3291459	1249
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000153603	processed_transcript		11	1	3292195	456
ENSMUSG00000020591	protein_coding	Ntsr2	ENSMUST00000221596	protein_coding		12	1	16653382	963
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000136285	processed_transcript		11	1	3292868	652
ENSMUSG00000038722	protein_coding	Bud31	ENSMUST00000159018	protein_coding	principal1	5	1	145140408	741
ENSMUSG00000020453	protein_coding	Patz1	ENSMUST00000154319	protein_coding		11	1	3298284	495
ENSMUSG00000070372	protein_coding	Capza1	ENSMUST00000094028	protein_coding	principal1	3	-1	104864505	3193
ENSMUSG00000038722	protein_coding	Bud31	ENSMUST00000160075	protein_coding	principal1	5	1	145140415	928
ENSMUSG00000070372	protein_coding	Capza1	ENSMUST00000195912	protein_coding		3	-1	104864400	360
ENSMUSG00000074491	protein_coding	Clec4g	ENSMUST00000062037	protein_coding	principal1	8	-1	3720651	1242
ENSMUSG00000038722	protein_coding	Bud31	ENSMUST00000161974	retained_intron		5	1	145142148	469
ENSMUSG00000070372	protein_coding	Capza1	ENSMUST00000196924	retained_intron		3	-1	104842961	466
ENSMUSG00000038722	protein_coding	Bud31	ENSMUST00000160840	retained_intron		5	1	145144804	534
ENSMUSG00000036480	protein_coding	Prss56	ENSMUST00000044533	protein_coding	principal1	1	1	87183313	2180
ENSMUSG00000070372	protein_coding	Capza1	ENSMUST00000155476	retained_intron		3	-1	104864373	489
ENSMUSG00000000628	protein_coding	Hk2	ENSMUST00000000642	protein_coding	principal1	6	-1	82774454	5513
ENSMUSG00000020591	protein_coding	Ntsr2	ENSMUST00000111064	protein_coding	principal1	12	1	16653484	1524
ENSMUSG00000114973	processed_pseudogene	Gm19156	ENSMUST00000226481	processed_pseudogene		14	1	51579731	465
ENSMUSG00000041935	protein_coding	AW549877	ENSMUST00000046633	protein_coding	principal1	15	-1	3995744	5076
ENSMUSG00000074491	protein_coding	Clec4g	ENSMUST00000159612	retained_intron		8	-1	3718653	531
ENSMUSG00000000628	protein_coding	Hk2	ENSMUST00000168725	processed_transcript		6	-1	82726309	594
ENSMUSG00000000628	protein_coding	Hk2	ENSMUST00000170833	protein_coding		6	-1	82773363	2792
ENSMUSG00000020481	protein_coding	Ankrd36	ENSMUST00000118112	protein_coding		11	1	5569817	3893
ENSMUSG00000020591	protein_coding	Ntsr2	ENSMUST00000220892	protein_coding		12	1	16653500	846
ENSMUSG00000000628	protein_coding	Hk2	ENSMUST00000169270	protein_coding		6	-1	82772988	505
ENSMUSG00000074491	protein_coding	Clec4g	ENSMUST00000058040	protein_coding		8	-1	3717553	1441
ENSMUSG00000020591	protein_coding	Ntsr2	ENSMUST00000222957	retained_intron		12	1	16653738	2757
ENSMUSG00000041935	protein_coding	AW549877	ENSMUST00000228421	processed_transcript		15	-1	3992078	767
ENSMUSG00000020481	protein_coding	Ankrd36	ENSMUST00000146773	processed_transcript		11	1	5574083	629
ENSMUSG00000020591	protein_coding	Ntsr2	ENSMUST00000221049	protein_coding		12	1	16653758	1028
ENSMUSG00000101232	protein_coding	Scgb1b15	ENSMUST00000189118	protein_coding	principal1	7	1	32836554	417
ENSMUSG00000020481	protein_coding	Ankrd36	ENSMUST00000137933	protein_coding		11	1	5628738	1696
ENSMUSG00000079244	protein_coding	Gm5622	ENSMUST00000096170	protein_coding	principal1	14	1	51552790	1581
ENSMUSG00000108233	processed_pseudogene	Gm44084	ENSMUST00000203947	processed_pseudogene		6	1	134835844	409
ENSMUSG00000111052	lincRNA	Gm20139	ENSMUST00000216041	lincRNA		10	1	19141751	3888
ENSMUSG00000111052	lincRNA	Gm20139	ENSMUST00000215762	lincRNA		10	1	19141786	657
ENSMUSG00000111052	lincRNA	Gm20139	ENSMUST00000216683	lincRNA		10	1	19167238	4695
ENSMUSG00000020481	protein_coding	Ankrd36	ENSMUST00000109856	protein_coding	principal2	11	1	5569684	4491
ENSMUSG00000111606	processed_pseudogene	Gm7213	ENSMUST00000215977	processed_pseudogene		10	1	19262034	950
ENSMUSG00000081691	processed_pseudogene	Gm11965	ENSMUST00000122017	processed_pseudogene		11	-1	5678632	277
ENSMUSG00000100581	unprocessed_pseudogene	Gm21785	ENSMUST00000185440	unprocessed_pseudogene		Y	-1	85454516	696
ENSMUSG00000081021	processed_pseudogene	Gm11964	ENSMUST00000120982	processed_pseudogene		11	1	5634139	444
ENSMUSG00000083547	processed_pseudogene	Gm13321	ENSMUST00000117101	processed_pseudogene		2	-1	12422026	400
ENSMUSG00000070448	polymorphic_pseudogene	Vmn2r89	ENSMUST00000239412	polymorphic_pseudogene		14	1	51451857	2696
ENSMUSG00000104045	lincRNA	Gm37565	ENSMUST00000192277	lincRNA		2	1	12697417	491
ENSMUSG00000028826	protein_coding	Maco1	ENSMUST00000030628	protein_coding	principal1	4	-1	134853345	3826
ENSMUSG00000037890	protein_coding	Wdr19	ENSMUST00000203653	protein_coding	principal1	5	1	65199696	6279
ENSMUSG00000070448	polymorphic_pseudogene	Vmn2r89	ENSMUST00000161670	processed_transcript		14	1	51451857	5421
ENSMUSG00000070448	polymorphic_pseudogene	Vmn2r89	ENSMUST00000232790	processed_transcript		14	1	51451857	8293
ENSMUSG00000100559	transcribed_unprocessed_pseudogene	Gm20803	ENSMUST00000190968	processed_transcript		Y	-1	61947950	1230
ENSMUSG00000070448	polymorphic_pseudogene	Vmn2r89	ENSMUST00000233023	processed_transcript		14	1	51451857	6653
ENSMUSG00000085388	antisense	Ptf1aos	ENSMUST00000122978	antisense		2	-1	19446674	916
ENSMUSG00000113183	sense_intronic	Gm47664	ENSMUST00000222966	sense_intronic		13	1	20499888	1340
ENSMUSG00000100559	transcribed_unprocessed_pseudogene	Gm20803	ENSMUST00000187186	transcribed_unprocessed_pseudogene		Y	-1	61946433	694
ENSMUSG00000113557	TEC	Gm47657	ENSMUST00000220999	TEC		13	1	20504795	1804
ENSMUSG00000032652	protein_coding	Crebl2	ENSMUST00000046303	protein_coding	principal1	6	1	134830154	3629
ENSMUSG00000113649	TEC	Gm47665	ENSMUST00000222367	TEC		13	1	20271905	2135
ENSMUSG00000028826	protein_coding	Maco1	ENSMUST00000137707	nonsense_mediated_decay		4	-1	134853149	1579
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000204243	protein_coding		6	-1	47540735	785
ENSMUSG00000032652	protein_coding	Crebl2	ENSMUST00000145643	retained_intron		6	1	134830228	709
ENSMUSG00000096413	unprocessed_pseudogene	Gm3616	ENSMUST00000174430	unprocessed_pseudogene		7	-1	9389264	2514
ENSMUSG00000032652	protein_coding	Crebl2	ENSMUST00000111937	protein_coding		6	1	134830255	612
ENSMUSG00000040310	protein_coding	Alx4	ENSMUST00000042078	protein_coding	principal1	2	1	93642384	5253
ENSMUSG00000041112	protein_coding	Elmo1	ENSMUST00000181429	retained_intron		13	1	20090596	3113
ENSMUSG00000099739	unprocessed_pseudogene	Gm20804	ENSMUST00000188372	unprocessed_pseudogene		Y	-1	62021078	696
ENSMUSG00000100874	unprocessed_pseudogene	Gm28598	ENSMUST00000186490	unprocessed_pseudogene		Y	-1	62050648	615
ENSMUSG00000032652	protein_coding	Crebl2	ENSMUST00000203742	retained_intron		6	1	134851158	2367
ENSMUSG00000028826	protein_coding	Maco1	ENSMUST00000148595	nonsense_mediated_decay		4	-1	134853263	1187
ENSMUSG00000040310	protein_coding	Alx4	ENSMUST00000111254	protein_coding		2	1	93642388	7056
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000171233	protein_coding	principal1	17	1	31295483	2972
ENSMUSG00000101689	unprocessed_pseudogene	Gm28599	ENSMUST00000189838	unprocessed_pseudogene		Y	-1	62087637	694
ENSMUSG00000037514	protein_coding	Pank2	ENSMUST00000150843	protein_coding	principal1	2	1	131262500	4266
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000237460	protein_coding		17	1	31295826	692
ENSMUSG00000028826	protein_coding	Maco1	ENSMUST00000136113	retained_intron		4	-1	134853317	1011
ENSMUSG00000029624	protein_coding	Ptcd1	ENSMUST00000031628	protein_coding	principal1	5	-1	145167108	3087
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000235972	protein_coding		17	1	31296204	270
ENSMUSG00000101285	lincRNA	Gm28600	ENSMUST00000189502	lincRNA		Y	1	62128751	1495
ENSMUSG00000027456	protein_coding	Sdcbp2	ENSMUST00000028950	protein_coding	principal1	2	1	151572622	1399
ENSMUSG00000070448	polymorphic_pseudogene	Vmn2r89	ENSMUST00000159734	protein_coding	alternative2	14	1	51451963	2715
ENSMUSG00000101285	lincRNA	Gm28600	ENSMUST00000187374	lincRNA		Y	1	62129204	438
ENSMUSG00000068814	protein_coding	Olfr1145	ENSMUST00000079711	protein_coding	alternative2	2	1	87809855	945
ENSMUSG00000029624	protein_coding	Ptcd1	ENSMUST00000161390	protein_coding		5	-1	145166956	273
ENSMUSG00000037890	protein_coding	Wdr19	ENSMUST00000041892	protein_coding	principal1	5	1	65199698	4401
ENSMUSG00000068814	protein_coding	Olfr1145	ENSMUST00000090707	protein_coding	principal2	2	1	87809822	978
ENSMUSG00000026735	protein_coding	Ptf1a	ENSMUST00000028068	protein_coding	principal1	2	1	19445663	1508
ENSMUSG00000096534	protein_coding	Krtap16-3	ENSMUST00000179707	protein_coding	principal1	16	-1	88962873	601
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000165149	protein_coding	principal1	17	1	31296215	3389
ENSMUSG00000070448	polymorphic_pseudogene	Vmn2r89	ENSMUST00000159611	protein_coding	principal4	14	1	51451962	2939
ENSMUSG00000064272	protein_coding	Gpbar1	ENSMUST00000077985	protein_coding	principal1	1	1	74278550	1075
ENSMUSG00000110917	lincRNA	Gm33056	ENSMUST00000213234	lincRNA		10	1	19290989	1120
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000236251	protein_coding		17	1	31296367	1510
ENSMUSG00000089836	unprocessed_pseudogene	Gm16290	ENSMUST00000161175	unprocessed_pseudogene		14	-1	51559358	474
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000237932	protein_coding		17	1	31296990	602
ENSMUSG00000115832	processed_pseudogene	Gm19158	ENSMUST00000227619	processed_pseudogene		14	1	51618064	478
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000236147	processed_transcript		17	1	31296993	215
ENSMUSG00000104314	TEC	Gm37907	ENSMUST00000195644	TEC		13	1	114227111	846
ENSMUSG00000083185	unprocessed_pseudogene	Olfr1146-ps1	ENSMUST00000117180	unprocessed_pseudogene		2	1	87816534	943
ENSMUSG00000095650	protein_coding	Gm20854	ENSMUST00000181549	protein_coding	principal1	Y	-1	85530908	1156
ENSMUSG00000060791	protein_coding	Gmfg	ENSMUST00000108292	protein_coding	principal1	7	1	28437447	657
ENSMUSG00000114655	TEC	4631422I05Rik	ENSMUST00000225060	TEC		13	-1	114242640	1763
ENSMUSG00000068399	protein_coding	Gm7247	ENSMUST00000162998	protein_coding	principal1	14	1	51361756	1157
ENSMUSG00000060791	protein_coding	Gmfg	ENSMUST00000108289	protein_coding		7	1	28437487	477
ENSMUSG00000037514	protein_coding	Pank2	ENSMUST00000184105	nonsense_mediated_decay		2	1	131262525	1398
ENSMUSG00000026432	protein_coding	Avpr1b	ENSMUST00000027690	protein_coding	principal1	1	1	131599239	4023
ENSMUSG00000061082	protein_coding	Plac1	ENSMUST00000074861	protein_coding	principal1	X	-1	53240111	1041
ENSMUSG00000095650	protein_coding	Gm20854	ENSMUST00000178889	protein_coding	principal1	Y	-1	85529518	1002
ENSMUSG00000037514	protein_coding	Pank2	ENSMUST00000184932	nonsense_mediated_decay		2	1	131262568	3622
ENSMUSG00000037890	protein_coding	Wdr19	ENSMUST00000204582	retained_intron		5	1	65199700	2516
ENSMUSG00000025089	protein_coding	Gfra1	ENSMUST00000026076	protein_coding	principal3	19	-1	58455398	4641
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000043881	protein_coding	alternative2	10	1	20312484	5437
ENSMUSG00000026432	protein_coding	Avpr1b	ENSMUST00000190410	protein_coding		1	1	131599723	623
ENSMUSG00000037514	protein_coding	Pank2	ENSMUST00000145904	protein_coding		2	1	131262796	558
ENSMUSG00000116708	processed_pseudogene	Gm49689	ENSMUST00000232543	processed_pseudogene		16	-1	89010232	392
ENSMUSG00000045591	protein_coding	Olig3	ENSMUST00000053225	protein_coding	principal1	10	1	19356533	2072
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000236710	nonsense_mediated_decay		17	1	31300339	780
ENSMUSG00000025089	protein_coding	Gfra1	ENSMUST00000129100	protein_coding	alternative1	19	-1	58454592	4415
ENSMUSG00000060791	protein_coding	Gmfg	ENSMUST00000078845	protein_coding	principal1	7	1	28440927	637
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000187338	retained_intron		10	1	20312528	774
ENSMUSG00000096024	protein_coding	Gm17174	ENSMUST00000178962	protein_coding	principal1	14	-1	51592139	671
ENSMUSG00000095992	protein_coding	Krtap22-2	ENSMUST00000178913	protein_coding	principal1	16	-1	89010759	365
ENSMUSG00000037514	protein_coding	Pank2	ENSMUST00000138509	processed_transcript		2	1	131262839	1791
ENSMUSG00000061082	protein_coding	Plac1	ENSMUST00000114843	protein_coding	principal1	X	-1	53114530	1201
ENSMUSG00000025089	protein_coding	Gfra1	ENSMUST00000152507	protein_coding	principal3	19	-1	58455301	1937
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000190156	nonsense_mediated_decay		10	1	20312529	3164
ENSMUSG00000037514	protein_coding	Pank2	ENSMUST00000183388	nonsense_mediated_decay		2	1	131274077	370
ENSMUSG00000060791	protein_coding	Gmfg	ENSMUST00000135686	protein_coding		7	1	28441064	599
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000216560	retained_intron		10	1	20312532	3064
ENSMUSG00000025089	protein_coding	Gfra1	ENSMUST00000140141	nonsense_mediated_decay		19	-1	58455359	2130
ENSMUSG00000061082	protein_coding	Plac1	ENSMUST00000174390	protein_coding	principal1	X	-1	53209724	907
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000185800	protein_coding	alternative2	10	1	20312537	3142
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000237835	processed_transcript		17	1	31305543	380
ENSMUSG00000037514	protein_coding	Pank2	ENSMUST00000183349	nonsense_mediated_decay		2	1	131274185	646
ENSMUSG00000025089	protein_coding	Gfra1	ENSMUST00000138530	protein_coding		19	-1	58455006	542
ENSMUSG00000117044	lincRNA	Gm35097	ENSMUST00000233532	lincRNA		17	1	45147237	4393
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000215262	retained_intron		10	1	20315954	3988
ENSMUSG00000025089	protein_coding	Gfra1	ENSMUST00000131877	protein_coding		19	-1	58455909	841
ENSMUSG00000082044	processed_pseudogene	Snrpert	ENSMUST00000121967	processed_pseudogene		2	-1	131322366	279
ENSMUSG00000117217	processed_pseudogene	Gm4766	ENSMUST00000233124	processed_pseudogene		17	-1	45164168	939
ENSMUSG00000060791	protein_coding	Gmfg	ENSMUST00000138741	retained_intron		7	1	28443107	2182
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000191438	nonsense_mediated_decay		10	1	20323720	2383
ENSMUSG00000025089	protein_coding	Gfra1	ENSMUST00000123957	protein_coding		19	-1	58454620	349
ENSMUSG00000020075	protein_coding	Ddx21	ENSMUST00000045866	protein_coding	principal1	10	-1	62602281	4722
ENSMUSG00000025089	protein_coding	Gfra1	ENSMUST00000135730	protein_coding		19	-1	58455161	412
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000189158	nonsense_mediated_decay		10	1	20326045	647
ENSMUSG00000020075	protein_coding	Ddx21	ENSMUST00000218393	retained_intron		10	-1	62590177	480
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000191143	retained_intron		10	1	20329049	2151
ENSMUSG00000025089	protein_coding	Gfra1	ENSMUST00000169850	protein_coding	principal3	19	-1	58454466	3224
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000188546	retained_intron		10	1	20333254	834
ENSMUSG00000020075	protein_coding	Ddx21	ENSMUST00000220060	retained_intron		10	-1	62590971	558
ENSMUSG00000087002	antisense	Gm16277	ENSMUST00000143595	antisense		19	1	58204139	662
ENSMUSG00000110363	lincRNA	Gm45576	ENSMUST00000210981	lincRNA		8	1	47557529	1322
ENSMUSG00000100443	unprocessed_pseudogene	Scgb2b16-ps	ENSMUST00000188720	unprocessed_pseudogene		7	-1	32876689	333
ENSMUSG00000109960	processed_pseudogene	Gm45575	ENSMUST00000210283	processed_pseudogene		8	-1	47628100	548
ENSMUSG00000049094	transcribed_unprocessed_pseudogene	Olfr367-ps	ENSMUST00000213819	processed_transcript		2	1	37266951	541
ENSMUSG00000062458	processed_pseudogene	Gm8623	ENSMUST00000071573	processed_pseudogene		8	-1	47632764	436
ENSMUSG00000037608	protein_coding	Bclaf1	ENSMUST00000092678	protein_coding	principal3	10	1	20312469	5307
ENSMUSG00000101185	unprocessed_pseudogene	Scgb1b16-ps	ENSMUST00000186029	unprocessed_pseudogene		7	1	32883655	275
ENSMUSG00000105434	TEC	Gm43359	ENSMUST00000197944	TEC		5	-1	122484999	2200
ENSMUSG00000025389	protein_coding	Mip	ENSMUST00000026455	protein_coding	principal1	10	1	128225838	2144
ENSMUSG00000028848	protein_coding	Gpn2	ENSMUST00000030661	protein_coding	principal1	4	1	133584362	1367
ENSMUSG00000049094	transcribed_unprocessed_pseudogene	Olfr367-ps	ENSMUST00000130192	processed_transcript		2	1	37266966	511
ENSMUSG00000105970	TEC	Gm43360	ENSMUST00000197656	TEC		5	-1	122494908	2887
ENSMUSG00000049094	transcribed_unprocessed_pseudogene	Olfr367-ps	ENSMUST00000143957	transcribed_unprocessed_pseudogene		2	1	37270446	942
ENSMUSG00000097010	lincRNA	Gm26709	ENSMUST00000181194	lincRNA		12	1	72945807	599
ENSMUSG00000028848	protein_coding	Gpn2	ENSMUST00000105899	protein_coding		4	1	133584419	996
ENSMUSG00000027750	protein_coding	Postn	ENSMUST00000117373	protein_coding	alternative2	3	1	54361109	3121
ENSMUSG00000097010	lincRNA	Gm26709	ENSMUST00000223260	lincRNA		12	1	72945815	715
ENSMUSG00000028848	protein_coding	Gpn2	ENSMUST00000148909	processed_transcript		4	1	133584428	714
ENSMUSG00000097010	lincRNA	Gm26709	ENSMUST00000223049	lincRNA		12	1	72945826	819
ENSMUSG00000068075	protein_coding	Gm10229	ENSMUST00000089106	protein_coding	principal1	16	1	89015284	563
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000182855	protein_coding	principal2	14	1	21499770	6791
ENSMUSG00000097662	lincRNA	Gm2093	ENSMUST00000180518	lincRNA		15	1	3996039	3526
ENSMUSG00000102197	TEC	Gm38170	ENSMUST00000195404	TEC		12	1	72950895	816
ENSMUSG00000095841	processed_pseudogene	Gm8532	ENSMUST00000179174	processed_pseudogene		1	-1	131632969	461
ENSMUSG00000030602	protein_coding	Pak4	ENSMUST00000108283	protein_coding	principal1	7	-1	28598185	2899
ENSMUSG00000042410	protein_coding	Agps	ENSMUST00000047232	protein_coding	principal2	2	1	75832177	7359
ENSMUSG00000044084	protein_coding	Spem2	ENSMUST00000056941	protein_coding	principal1	11	-1	69818465	1640
ENSMUSG00000032740	protein_coding	Ccdc88a	ENSMUST00000040182	protein_coding	principal1	11	1	29373658	9376
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000182405	protein_coding	principal2	14	1	21499785	6977
ENSMUSG00000061461	protein_coding	Smim20	ENSMUST00000203623	retained_intron		5	1	53267083	845
ENSMUSG00000030602	protein_coding	Pak4	ENSMUST00000135923	processed_transcript		7	-1	28598155	391
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000182859	retained_intron		14	1	21499854	2125
ENSMUSG00000058172	protein_coding	Krtap6-1	ENSMUST00000076906	protein_coding	principal1	16	1	89031699	594
ENSMUSG00000030602	protein_coding	Pak4	ENSMUST00000150454	retained_intron		7	-1	28598086	620
ENSMUSG00000027750	protein_coding	Postn	ENSMUST00000107985	protein_coding	alternative2	3	1	54361109	3205
ENSMUSG00000032740	protein_coding	Ccdc88a	ENSMUST00000109477	protein_coding		11	1	29373777	1716
ENSMUSG00000042410	protein_coding	Agps	ENSMUST00000111952	protein_coding		2	1	75832189	2589
ENSMUSG00000086297	antisense	Gm15632	ENSMUST00000135936	antisense		15	-1	4072032	246
ENSMUSG00000030602	protein_coding	Pak4	ENSMUST00000032823	protein_coding	principal1	7	-1	28568237	2611
ENSMUSG00000042410	protein_coding	Agps	ENSMUST00000175646	protein_coding	alternative2	2	1	75832505	1839
ENSMUSG00000034614	protein_coding	Pik3ip1	ENSMUST00000045153	protein_coding	principal2	11	1	3330401	2573
ENSMUSG00000068074	protein_coding	Gm10228	ENSMUST00000089105	protein_coding	principal1	16	-1	89041472	550
ENSMUSG00000042410	protein_coding	Agps	ENSMUST00000176056	protein_coding		2	1	75868383	524
ENSMUSG00000108925	processed_pseudogene	Gm19880	ENSMUST00000207731	processed_pseudogene		7	1	28534772	318
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000159674	protein_coding	alternative2	14	1	51410820	4567
ENSMUSG00000042410	protein_coding	Agps	ENSMUST00000176626	processed_transcript		2	1	75873956	316
ENSMUSG00000032740	protein_coding	Ccdc88a	ENSMUST00000239407	protein_coding		11	1	29374348	6051
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000163019	protein_coding		14	1	51410820	4221
ENSMUSG00000061461	protein_coding	Smim20	ENSMUST00000147148	protein_coding	principal1	5	1	53267138	922
ENSMUSG00000034614	protein_coding	Pik3ip1	ENSMUST00000149253	retained_intron		11	1	3330728	466
ENSMUSG00000027750	protein_coding	Postn	ENSMUST00000073012	protein_coding	principal3	3	1	54361125	3189
ENSMUSG00000032740	protein_coding	Ccdc88a	ENSMUST00000137227	processed_transcript		11	1	29456496	487
ENSMUSG00000062400	protein_coding	Krtap6-5	ENSMUST00000074637	protein_coding	principal1	16	-1	89047883	595
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000235564	processed_transcript		17	1	31305875	2529
ENSMUSG00000034614	protein_coding	Pik3ip1	ENSMUST00000136536	protein_coding		11	1	3330787	920
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000233394	protein_coding	alternative2	14	1	51410820	4570
ENSMUSG00000032740	protein_coding	Ccdc88a	ENSMUST00000155854	protein_coding		11	1	29463888	1217
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000236467	retained_intron		17	1	31307465	2742
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000237928	protein_coding		17	1	31319176	1288
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000232951	protein_coding	alternative2	14	1	51410820	4342
ENSMUSG00000032740	protein_coding	Ccdc88a	ENSMUST00000123561	protein_coding		11	1	29470354	2209
ENSMUSG00000027750	protein_coding	Postn	ENSMUST00000081564	protein_coding	alternative2	3	1	54361143	2670
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000232797	protein_coding		14	1	51410820	4443
ENSMUSG00000042353	protein_coding	Frem3	ENSMUST00000039695	protein_coding	principal1	8	1	80611080	6384
ENSMUSG00000034614	protein_coding	Pik3ip1	ENSMUST00000153733	retained_intron		11	1	3330793	2168
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000233766	protein_coding		14	1	51410820	4218
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000235261	retained_intron		17	1	31322254	3990
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000233848	protein_coding	alternative2	14	1	51410820	4567
ENSMUSG00000032740	protein_coding	Ccdc88a	ENSMUST00000140194	protein_coding		11	1	29485979	1064
ENSMUSG00000034614	protein_coding	Pik3ip1	ENSMUST00000093399	protein_coding	alternative2	11	1	3330808	1098
ENSMUSG00000042410	protein_coding	Agps	ENSMUST00000176973	nonsense_mediated_decay		2	1	75894109	586
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000233280	protein_coding	alternative2	14	1	51410820	4573
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000237425	retained_intron		17	1	31325627	704
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000233920	protein_coding	alternative2	14	1	51410820	4345
ENSMUSG00000068073	protein_coding	1110025L11Rik	ENSMUST00000089104	protein_coding	principal1	16	-1	89064002	591
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000233126	protein_coding		14	1	51410820	4446
ENSMUSG00000032740	protein_coding	Ccdc88a	ENSMUST00000144450	processed_transcript		11	1	29493930	682
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000096222	retained_intron		14	1	21500853	3508
ENSMUSG00000027750	protein_coding	Postn	ENSMUST00000143258	protein_coding		3	1	54377560	655
ENSMUSG00000042410	protein_coding	Agps	ENSMUST00000177204	retained_intron		2	1	75909171	579
ENSMUSG00000034614	protein_coding	Pik3ip1	ENSMUST00000142961	retained_intron		11	1	3332072	536
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000237980	processed_transcript		17	1	31333617	524
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000233651	protein_coding		14	1	51410820	4221
ENSMUSG00000082161	processed_pseudogene	Gm11350	ENSMUST00000121436	processed_pseudogene		13	-1	25681143	870
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000235230	retained_intron		17	1	31335435	600
ENSMUSG00000024036	protein_coding	Slc37a1	ENSMUST00000235220	processed_transcript		17	1	31335887	1347
ENSMUSG00000061461	protein_coding	Smim20	ENSMUST00000204218	nonsense_mediated_decay		5	1	53267138	1231
ENSMUSG00000000606	protein_coding	Vmn2r88	ENSMUST00000022438	protein_coding	principal2	14	1	51411001	2574
ENSMUSG00000034614	protein_coding	Pik3ip1	ENSMUST00000138907	protein_coding		11	1	3332109	668
ENSMUSG00000057855	protein_coding	Krtap6-3	ENSMUST00000185581	protein_coding	principal1	16	1	89084015	520
ENSMUSG00000049018	protein_coding	Olfr368	ENSMUST00000217299	protein_coding	principal1	2	1	37326515	1200
ENSMUSG00000027750	protein_coding	Postn	ENSMUST00000145036	retained_intron		3	1	54378484	5223
ENSMUSG00000061461	protein_coding	Smim20	ENSMUST00000204465	nonsense_mediated_decay		5	1	53267177	931
ENSMUSG00000057855	protein_coding	Krtap6-3	ENSMUST00000079151	protein_coding		16	1	89084091	444
ENSMUSG00000060747	protein_coding	Ifnl3	ENSMUST00000078364	protein_coding	principal1	7	1	28522836	582
ENSMUSG00000069565	protein_coding	Dazap1	ENSMUST00000105362	protein_coding	principal3	10	1	80264984	2081
ENSMUSG00000115135	processed_pseudogene	Gm19157	ENSMUST00000227539	processed_pseudogene		14	1	51598894	481
ENSMUSG00000061461	protein_coding	Smim20	ENSMUST00000204839	retained_intron		5	1	53267190	2076
ENSMUSG00000049018	protein_coding	Olfr368	ENSMUST00000053990	protein_coding	principal1	2	1	37331749	985
ENSMUSG00000061461	protein_coding	Smim20	ENSMUST00000204089	retained_intron		5	1	53277118	212
ENSMUSG00000034614	protein_coding	Pik3ip1	ENSMUST00000136474	protein_coding		11	1	3332451	617
ENSMUSG00000068071	protein_coding	Gm6358	ENSMUST00000187643	protein_coding	principal5	16	1	89140851	489
ENSMUSG00000068071	protein_coding	Gm6358	ENSMUST00000089101	protein_coding	alternative2	16	1	89140944	156
ENSMUSG00000034614	protein_coding	Pik3ip1	ENSMUST00000139139	processed_transcript		11	1	3332972	897
ENSMUSG00000059113	protein_coding	Gm10061	ENSMUST00000073111	protein_coding	principal1	16	1	89151086	465
ENSMUSG00000074357	bidirectional_promoter_lncRNA	AA386476	ENSMUST00000211481	bidirectional_promoter_lncRNA		8	1	47675391	1067
ENSMUSG00000094715	protein_coding	Gm17078	ENSMUST00000167617	protein_coding	principal1	14	-1	51611310	668
ENSMUSG00000034614	protein_coding	Pik3ip1	ENSMUST00000130747	processed_transcript		11	1	3334381	631
ENSMUSG00000074357	bidirectional_promoter_lncRNA	AA386476	ENSMUST00000098781	bidirectional_promoter_lncRNA		8	1	47675391	1665
ENSMUSG00000084174	protein_coding	Sycn	ENSMUST00000119180	protein_coding	principal1	7	1	28540885	556
ENSMUSG00000027750	protein_coding	Postn	ENSMUST00000154157	retained_intron		3	1	54383107	891
ENSMUSG00000069565	protein_coding	Dazap1	ENSMUST00000105361	protein_coding	alternative1	10	1	80265016	1537
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000182964	protein_coding	alternative2	14	1	21500853	7699
ENSMUSG00000084941	processed_transcript	Gm11944	ENSMUST00000152576	processed_transcript		11	1	3308996	873
ENSMUSG00000044227	protein_coding	Gm9789	ENSMUST00000062524	protein_coding	principal1	16	1	89157952	397
ENSMUSG00000063049	protein_coding	Ing2	ENSMUST00000146625	processed_transcript		8	-1	47673689	2320
ENSMUSG00000091142	protein_coding	Gm17175	ENSMUST00000172117	protein_coding	principal1	14	-1	51574063	1403
ENSMUSG00000099417	transcribed_processed_pseudogene	1700028B04Rik	ENSMUST00000190841	processed_transcript		7	1	28492550	971
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000183228	retained_intron		14	1	21500885	3873
ENSMUSG00000027750	protein_coding	Postn	ENSMUST00000127452	retained_intron		3	1	54383109	900
ENSMUSG00000099417	transcribed_processed_pseudogene	1700028B04Rik	ENSMUST00000186274	transcribed_processed_pseudogene		7	1	28496941	555
ENSMUSG00000041165	protein_coding	Spem1	ENSMUST00000045771	protein_coding	principal1	11	-1	69822180	1041
ENSMUSG00000118574	unprocessed_pseudogene	AC136456.1	ENSMUST00000239126	unprocessed_pseudogene		7	1	28517298	81
ENSMUSG00000027750	protein_coding	Postn	ENSMUST00000150868	retained_intron		3	1	54388889	624
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000183055	retained_intron		14	1	21500889	2680
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000238837	protein_coding	alternative2	14	1	21516875	6165
ENSMUSG00000001983	protein_coding	Taco1	ENSMUST00000002048	protein_coding	principal1	11	1	106066061	1383
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000068726	protein_coding		2	1	90940397	7851
ENSMUSG00000091296	protein_coding	Gm4181	ENSMUST00000170249	protein_coding	principal1	14	-1	51635666	898
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000182732	retained_intron		14	1	21622542	4671
ENSMUSG00000063049	protein_coding	Ing2	ENSMUST00000080353	protein_coding	principal1	8	-1	47675158	2812
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000226589	processed_transcript		14	1	21625752	18
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000069648	protein_coding	alternative2	14	1	21499785	7649
ENSMUSG00000085255	antisense	Taco1os	ENSMUST00000140736	antisense		11	-1	106066305	644
ENSMUSG00000091296	protein_coding	Gm4181	ENSMUST00000226595	nonsense_mediated_decay		14	-1	51635629	760
ENSMUSG00000090228	processed_pseudogene	Gm16289	ENSMUST00000162079	processed_pseudogene		14	-1	51361857	183
ENSMUSG00000021767	protein_coding	Kat6b	ENSMUST00000112458	protein_coding		14	1	21516751	997
ENSMUSG00000063049	protein_coding	Ing2	ENSMUST00000125536	processed_transcript		8	-1	47675556	628
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000127580	processed_transcript		2	1	90940458	426
ENSMUSG00000100324	processed_pseudogene	Gm9156	ENSMUST00000189660	processed_pseudogene		7	-1	32931835	463
ENSMUSG00000115374	transcribed_unprocessed_pseudogene	Vmn2r-ps111	ENSMUST00000226341	transcribed_unprocessed_pseudogene		14	1	51428763	740
ENSMUSG00000115374	transcribed_unprocessed_pseudogene	Vmn2r-ps111	ENSMUST00000161721	processed_transcript		14	1	51428763	433
ENSMUSG00000069565	protein_coding	Dazap1	ENSMUST00000092305	protein_coding	alternative1	10	1	80265074	1994
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000154442	processed_transcript		2	1	90940537	478
ENSMUSG00000115166	transcribed_unprocessed_pseudogene	Vmn2r-ps110	ENSMUST00000226212	processed_transcript		14	1	51377284	433
ENSMUSG00000115166	transcribed_unprocessed_pseudogene	Vmn2r-ps110	ENSMUST00000228290	transcribed_unprocessed_pseudogene		14	1	51377284	986
ENSMUSG00000030600	protein_coding	Lrfn1	ENSMUST00000190954	protein_coding		7	1	28451980	812
ENSMUSG00000040596	protein_coding	Pogk	ENSMUST00000135673	protein_coding		1	-1	166409782	2433
ENSMUSG00000089761	processed_transcript	Vmn2r-ps111	ENSMUST00000161565	processed_transcript		14	1	51377348	241
ENSMUSG00000030600	protein_coding	Lrfn1	ENSMUST00000189877	protein_coding	principal3	7	1	28452148	1852
ENSMUSG00000117400	lincRNA	Gm50057	ENSMUST00000234429	lincRNA		17	-1	23916919	1422
ENSMUSG00000072381	processed_pseudogene	Gm10355	ENSMUST00000097146	processed_pseudogene		3	-1	101307079	517
ENSMUSG00000034471	protein_coding	Caskin2	ENSMUST00000041684	protein_coding	principal1	11	-1	115813630	4929
ENSMUSG00000069565	protein_coding	Dazap1	ENSMUST00000150328	processed_transcript		10	1	80265124	581
ENSMUSG00000040596	protein_coding	Pogk	ENSMUST00000131487	protein_coding		1	-1	166409391	8692
ENSMUSG00000030600	protein_coding	Lrfn1	ENSMUST00000191267	retained_intron		7	1	28452238	1972
ENSMUSG00000092306	unprocessed_pseudogene	Gm20447	ENSMUST00000173290	unprocessed_pseudogene		17	-1	36198513	599
ENSMUSG00000020431	protein_coding	Adcy1	ENSMUST00000020706	protein_coding	principal1	11	1	7063489	12259
ENSMUSG00000106316	processed_pseudogene	Gm43467	ENSMUST00000197441	processed_pseudogene		3	1	101310846	437
ENSMUSG00000040596	protein_coding	Pogk	ENSMUST00000148243	nonsense_mediated_decay		1	-1	166409787	3010
ENSMUSG00000034471	protein_coding	Caskin2	ENSMUST00000125658	processed_transcript		11	-1	115800881	600
ENSMUSG00000057417	protein_coding	Dcpp3	ENSMUST00000234395	protein_coding	principal1	17	1	23917478	678
ENSMUSG00000034471	protein_coding	Caskin2	ENSMUST00000132780	protein_coding		11	-1	115808102	807
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000184931	protein_coding		2	-1	93822549	2629
ENSMUSG00000086750	antisense	Gm11770	ENSMUST00000135048	antisense		11	-1	120216993	548
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000159774	protein_coding	principal1	3	1	40894145	4455
ENSMUSG00000057417	protein_coding	Dcpp3	ENSMUST00000115428	protein_coding	principal1	17	1	23917458	610
ENSMUSG00000034471	protein_coding	Caskin2	ENSMUST00000156812	protein_coding		11	-1	115813639	913
ENSMUSG00000069565	protein_coding	Dazap1	ENSMUST00000138032	retained_intron		10	1	80280423	1100
ENSMUSG00000020431	protein_coding	Adcy1	ENSMUST00000135398	processed_transcript		11	1	7159882	4333
ENSMUSG00000030600	protein_coding	Lrfn1	ENSMUST00000108288	protein_coding	alternative2	7	1	28458658	3060
ENSMUSG00000117527	processed_pseudogene	Gm50058	ENSMUST00000234771	processed_pseudogene		17	-1	23893588	843
ENSMUSG00000084071	processed_pseudogene	Gm13378	ENSMUST00000117483	processed_pseudogene		2	1	21244105	336
ENSMUSG00000069565	protein_coding	Dazap1	ENSMUST00000151619	retained_intron		10	1	80282867	454
ENSMUSG00000030600	protein_coding	Lrfn1	ENSMUST00000055110	protein_coding	principal3	7	1	28458658	1479
ENSMUSG00000104347	TEC	Gm37689	ENSMUST00000193139	TEC		4	1	6378018	275
ENSMUSG00000087672	antisense	Gm15122	ENSMUST00000135434	antisense		10	-1	80283006	462
ENSMUSG00000040596	protein_coding	Pogk	ENSMUST00000128861	protein_coding		1	-1	166409863	4848
ENSMUSG00000085680	antisense	Gm13327	ENSMUST00000133391	antisense		2	-1	21369111	2741
ENSMUSG00000040596	protein_coding	Pogk	ENSMUST00000127596	protein_coding	principal1	1	-1	166409289	769
ENSMUSG00000108878	TEC	Gm49493	ENSMUST00000208403	TEC		7	1	83892262	4136
ENSMUSG00000029466	protein_coding	Anapc7	ENSMUST00000122010	protein_coding	principal1	5	1	122421693	2950
ENSMUSG00000064215	protein_coding	Ifi27	ENSMUST00000079294	protein_coding	alternative2	12	1	103434211	963
ENSMUSG00000022297	protein_coding	Fzd6	ENSMUST00000179165	protein_coding	principal1	15	1	39006034	4325
ENSMUSG00000064215	protein_coding	Ifi27	ENSMUST00000076788	protein_coding	alternative2	12	1	103434211	708
ENSMUSG00000040596	protein_coding	Pogk	ENSMUST00000169324	protein_coding		1	-1	166409828	7034
ENSMUSG00000029466	protein_coding	Anapc7	ENSMUST00000119792	protein_coding		5	1	122422481	3599
ENSMUSG00000001763	protein_coding	Tspan33	ENSMUST00000046750	protein_coding	principal3	6	1	29694222	1994
ENSMUSG00000009030	protein_coding	Pdcl	ENSMUST00000009174	protein_coding	principal1	2	-1	37359332	2858
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000203472	protein_coding		3	1	40894263	588
ENSMUSG00000064215	protein_coding	Ifi27	ENSMUST00000076702	protein_coding	alternative2	12	1	103434211	828
ENSMUSG00000038503	protein_coding	Mesd	ENSMUST00000138803	processed_transcript		7	1	83884466	614
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000114803	protein_coding	principal1	17	1	28313519	2025
ENSMUSG00000010936	protein_coding	Vac14	ENSMUST00000213003	nonsense_mediated_decay		8	1	110618585	3140
ENSMUSG00000029466	protein_coding	Anapc7	ENSMUST00000148266	retained_intron		5	1	122439374	542
ENSMUSG00000029466	protein_coding	Anapc7	ENSMUST00000197993	retained_intron		5	1	122440139	686
ENSMUSG00000083674	transcribed_unitary_pseudogene	Zfp133-ps	ENSMUST00000124788	processed_transcript		2	1	144459280	1079
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000114801	protein_coding		17	1	28313523	1825
ENSMUSG00000029466	protein_coding	Anapc7	ENSMUST00000154074	protein_coding		5	1	122441375	226
ENSMUSG00000103400	antisense	Gm15853	ENSMUST00000195518	antisense		1	-1	166380493	2517
ENSMUSG00000022297	protein_coding	Fzd6	ENSMUST00000227606	retained_intron		15	1	39006280	647
ENSMUSG00000083674	transcribed_unitary_pseudogene	Zfp133-ps	ENSMUST00000149523	processed_transcript		2	1	144464395	424
ENSMUSG00000083674	transcribed_unitary_pseudogene	Zfp133-ps	ENSMUST00000119058	transcribed_unitary_pseudogene		2	1	144464460	1802
ENSMUSG00000022297	protein_coding	Fzd6	ENSMUST00000228491	nonsense_mediated_decay		15	1	39006280	750
ENSMUSG00000009030	protein_coding	Pdcl	ENSMUST00000112940	protein_coding	principal1	2	-1	37359253	3056
ENSMUSG00000029466	protein_coding	Anapc7	ENSMUST00000031422	protein_coding	principal1	5	1	122422444	2751
ENSMUSG00000083674	transcribed_unitary_pseudogene	Zfp133-ps	ENSMUST00000137929	processed_transcript		2	1	144465176	1557
ENSMUSG00000096278	protein_coding	Dcpp2	ENSMUST00000088598	protein_coding	principal1	17	1	23898721	589
ENSMUSG00000009030	protein_coding	Pdcl	ENSMUST00000138314	nonsense_mediated_decay		2	-1	37359189	772
ENSMUSG00000001763	protein_coding	Tspan33	ENSMUST00000115250	protein_coding	alternative1	6	1	29694234	1977
ENSMUSG00000022297	protein_coding	Fzd6	ENSMUST00000022906	protein_coding	principal1	15	1	39006333	4081
ENSMUSG00000096278	protein_coding	Dcpp2	ENSMUST00000234110	protein_coding	principal1	17	1	23898734	689
ENSMUSG00000106375	TEC	Gm43361	ENSMUST00000196562	TEC		5	1	122496159	4690
ENSMUSG00000009030	protein_coding	Pdcl	ENSMUST00000147703	protein_coding		2	-1	37359196	685
ENSMUSG00000096278	protein_coding	Dcpp2	ENSMUST00000168272	protein_coding	principal1	17	1	23880880	589
ENSMUSG00000001763	protein_coding	Tspan33	ENSMUST00000137925	retained_intron		6	1	29708028	3558
ENSMUSG00000117403	processed_pseudogene	Gm50059	ENSMUST00000234929	processed_pseudogene		17	-1	23912371	808
ENSMUSG00000099477	unprocessed_pseudogene	Gm28349	ENSMUST00000188590	unprocessed_pseudogene		Y	-1	85558926	615
ENSMUSG00000117488	lincRNA	Gm41545	ENSMUST00000234950	lincRNA		17	-1	23925497	424
ENSMUSG00000022297	protein_coding	Fzd6	ENSMUST00000228922	nonsense_mediated_decay		15	1	39007387	458
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000028623	protein_coding	principal1	2	-1	93822568	2871
ENSMUSG00000097875	bidirectional_promoter_lncRNA	Gm26704	ENSMUST00000181362	bidirectional_promoter_lncRNA		15	-1	39006185	2901
ENSMUSG00000108293	unprocessed_pseudogene	Pla2g4c-ps	ENSMUST00000204668	unprocessed_pseudogene		7	1	13361111	1364
ENSMUSG00000109929	processed_pseudogene	Gm45268	ENSMUST00000210046	processed_pseudogene		7	-1	13365076	370
ENSMUSG00000037890	protein_coding	Wdr19	ENSMUST00000204647	retained_intron		5	1	65199717	3381
ENSMUSG00000037890	protein_coding	Wdr19	ENSMUST00000203676	retained_intron		5	1	65199731	2305
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000139321	retained_intron		2	-1	93705109	869
ENSMUSG00000037890	protein_coding	Wdr19	ENSMUST00000204375	retained_intron		5	1	65199740	1924
ENSMUSG00000109449	protein_coding	Olfr1280	ENSMUST00000219291	protein_coding	principal1	2	1	111314017	6883
ENSMUSG00000110902	lincRNA	Gm33104	ENSMUST00000214178	lincRNA		10	1	19486715	1010
ENSMUSG00000109449	protein_coding	Olfr1280	ENSMUST00000213551	nonsense_mediated_decay		2	1	111314017	5972
ENSMUSG00000110902	lincRNA	Gm33104	ENSMUST00000216664	lincRNA		10	1	19494643	743
ENSMUSG00000038503	protein_coding	Mesd	ENSMUST00000094215	protein_coding	principal1	7	1	83892000	4492
ENSMUSG00000037890	protein_coding	Wdr19	ENSMUST00000203359	retained_intron		5	1	65202615	5830
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000204496	nonsense_mediated_decay		3	1	40894277	4144
ENSMUSG00000102092	unprocessed_pseudogene	Gm21892	ENSMUST00000189182	unprocessed_pseudogene		Y	-1	85595910	696
ENSMUSG00000037890	protein_coding	Wdr19	ENSMUST00000203554	protein_coding		5	1	65256425	625
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000125407	nonsense_mediated_decay		2	-1	93822545	2376
ENSMUSG00000101989	lincRNA	Gm28346	ENSMUST00000189021	lincRNA		Y	-1	85605156	2167
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000132429	protein_coding		2	-1	93707318	535
ENSMUSG00000109449	protein_coding	Olfr1280	ENSMUST00000082167	protein_coding	principal1	2	1	111315438	1003
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000203214	nonsense_mediated_decay		3	1	40894289	623
ENSMUSG00000038503	protein_coding	Mesd	ENSMUST00000130103	protein_coding		7	1	83892002	489
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000144780	protein_coding		2	-1	93704509	478
ENSMUSG00000038503	protein_coding	Mesd	ENSMUST00000153377	nonsense_mediated_decay		7	1	83892330	1109
ENSMUSG00000056329	processed_transcript	1810010K12Rik	ENSMUST00000149577	processed_transcript		2	1	19452470	1208
ENSMUSG00000100990	processed_pseudogene	Gm7891	ENSMUST00000190284	processed_pseudogene		1	1	94204417	843
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000203650	protein_coding		3	1	40894306	797
ENSMUSG00000056329	processed_transcript	1810010K12Rik	ENSMUST00000070378	processed_transcript		2	1	19451828	1324
ENSMUSG00000038503	protein_coding	Mesd	ENSMUST00000207373	retained_intron		7	1	83895053	815
ENSMUSG00000026563	protein_coding	Tada1	ENSMUST00000027846	protein_coding	principal1	1	1	166379097	2215
ENSMUSG00000114742	antisense	Gm47936	ENSMUST00000225283	antisense		19	-1	43440460	584
ENSMUSG00000100347	processed_pseudogene	Gm7895	ENSMUST00000187459	processed_pseudogene		1	-1	94469887	1173
ENSMUSG00000100288	lincRNA	Gm28345	ENSMUST00000188769	lincRNA		Y	-1	85633606	1139
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000107162	protein_coding		7	1	96171246	11021
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000205065	nonsense_mediated_decay		3	1	40894324	3393
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000123649	processed_transcript		2	-1	93822549	3721
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000144263	retained_intron		7	1	96209663	557
ENSMUSG00000096445	protein_coding	Dcpp1	ENSMUST00000068580	protein_coding	principal1	17	1	23880876	617
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000152344	retained_intron		2	-1	93795989	573
ENSMUSG00000101282	lincRNA	Gm28152	ENSMUST00000188694	lincRNA		Y	1	85665589	1498
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000203892	protein_coding		3	1	40894345	1021
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000124870	retained_intron		17	1	28313547	2193
ENSMUSG00000095156	protein_coding	Olfr1281	ENSMUST00000208176	protein_coding	principal1	2	1	111326520	4905
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000204797	retained_intron		3	1	40912684	6365
ENSMUSG00000101282	lincRNA	Gm28152	ENSMUST00000191177	lincRNA		Y	1	85666042	433
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000133770	processed_transcript		7	1	96209713	507
ENSMUSG00000095156	protein_coding	Olfr1281	ENSMUST00000090326	protein_coding	principal1	2	1	111328421	918
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000204464	processed_transcript		3	1	40930545	2080
ENSMUSG00000099341	lincRNA	Gm29090	ENSMUST00000188526	lincRNA		Y	-1	85672245	457
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000129445	retained_intron		7	1	96210146	2527
ENSMUSG00000110835	TEC	Gm48563	ENSMUST00000215700	TEC		10	-1	19522650	3349
ENSMUSG00000026563	protein_coding	Tada1	ENSMUST00000138148	retained_intron		1	1	166379317	783
ENSMUSG00000022186	protein_coding	Oxct1	ENSMUST00000110690	protein_coding	principal1	15	1	4026383	3527
ENSMUSG00000100518	lincRNA	4930440C22Rik	ENSMUST00000190754	lincRNA		1	1	94797083	512
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000145838	protein_coding		2	-1	93822565	921
ENSMUSG00000026563	protein_coding	Tada1	ENSMUST00000138284	retained_intron		1	1	166379324	1957
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000157046	retained_intron		2	-1	93822545	981
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000108078	protein_coding	principal1	3	1	40846970	2492
ENSMUSG00000022186	protein_coding	Oxct1	ENSMUST00000138927	protein_coding		15	1	4026684	1743
ENSMUSG00000100518	lincRNA	4930440C22Rik	ENSMUST00000185490	lincRNA		1	1	94797442	1565
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000177322	nonsense_mediated_decay		19	1	8741413	1697
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000111248	protein_coding		2	-1	93822548	679
ENSMUSG00000041112	protein_coding	Elmo1	ENSMUST00000072519	protein_coding	principal1	13	1	20090619	5464
ENSMUSG00000027198	protein_coding	Ext2	ENSMUST00000125027	processed_transcript		2	-1	93822553	371
ENSMUSG00000037818	protein_coding	Abhd18	ENSMUST00000108077	protein_coding	principal1	3	1	40894322	3277
ENSMUSG00000026563	protein_coding	Tada1	ENSMUST00000132817	nonsense_mediated_decay		1	1	166379339	396
ENSMUSG00000096554	protein_coding	Olfr1282	ENSMUST00000099618	protein_coding	principal1	2	-1	111336076	918
ENSMUSG00000081353	processed_pseudogene	Gm13818	ENSMUST00000119441	processed_pseudogene		2	1	93794570	511
ENSMUSG00000022186	protein_coding	Oxct1	ENSMUST00000131240	processed_transcript		15	1	4047259	699
ENSMUSG00000004552	protein_coding	Ctse	ENSMUST00000073350	protein_coding	principal1	1	1	131638306	2126
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000239447	protein_coding	alternative2	2	1	32288253	4361
ENSMUSG00000074619	protein_coding	1700034I23Rik	ENSMUST00000099123	protein_coding	principal1	3	-1	40902543	2348
ENSMUSG00000075012	protein_coding	Fjx1	ENSMUST00000099678	protein_coding	principal1	2	-1	102452499	3134
ENSMUSG00000041112	protein_coding	Elmo1	ENSMUST00000180626	protein_coding		13	1	20111512	2020
ENSMUSG00000022186	protein_coding	Oxct1	ENSMUST00000124591	processed_transcript		15	1	4142523	480
ENSMUSG00000004552	protein_coding	Ctse	ENSMUST00000112411	protein_coding		1	1	131638494	1837
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000100194	protein_coding	alternative2	2	1	32288313	4373
ENSMUSG00000041112	protein_coding	Elmo1	ENSMUST00000221067	protein_coding		13	1	20185207	552
ENSMUSG00000041112	protein_coding	Elmo1	ENSMUST00000220751	processed_transcript		13	1	20251070	1087
ENSMUSG00000022186	protein_coding	Oxct1	ENSMUST00000133130	processed_transcript		15	1	4142812	471
ENSMUSG00000041112	protein_coding	Elmo1	ENSMUST00000221595	protein_coding		13	1	20282917	580
ENSMUSG00000118532	unprocessed_pseudogene	BX842667.1	ENSMUST00000239071	unprocessed_pseudogene		11	1	100559457	152
ENSMUSG00000087221	processed_transcript	BC037032	ENSMUST00000194637	TEC		15	-1	4024492	4379
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000133527	nonsense_mediated_decay		17	1	28313566	1751
ENSMUSG00000004552	protein_coding	Ctse	ENSMUST00000141061	retained_intron		1	1	131661911	1594
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000088007	nonsense_mediated_decay		17	1	28313567	1942
ENSMUSG00000087221	processed_transcript	BC037032	ENSMUST00000155191	antisense		15	-1	4027393	3291
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000127276	retained_intron		2	1	32288326	384
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000114804	protein_coding		17	1	28313572	1842
ENSMUSG00000045967	protein_coding	Gpr158	ENSMUST00000055946	protein_coding	principal1	2	1	21367542	7171
ENSMUSG00000112642	processed_pseudogene	Gm17849	ENSMUST00000219788	processed_pseudogene		10	1	111179952	853
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000131712	protein_coding		2	1	32288333	1010
ENSMUSG00000068067	protein_coding	1110057P08Rik	ENSMUST00000089097	protein_coding	principal1	16	1	89174735	465
ENSMUSG00000087221	processed_transcript	BC037032	ENSMUST00000140003	antisense		15	-1	4027402	3974
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000233705	processed_transcript		17	1	28313577	531
ENSMUSG00000041112	protein_coding	Elmo1	ENSMUST00000180767	retained_intron		13	1	20472726	3748
ENSMUSG00000087221	processed_transcript	BC037032	ENSMUST00000143717	antisense		15	-1	4027405	1757
ENSMUSG00000064215	protein_coding	Ifi27	ENSMUST00000066701	protein_coding	principal4	12	1	103434212	889
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000233381	nonsense_mediated_decay		17	1	28313798	1774
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000081670	protein_coding	alternative2	2	1	32288346	4164
ENSMUSG00000087221	processed_transcript	BC037032	ENSMUST00000149906	antisense		15	-1	4026076	713
ENSMUSG00000087221	processed_transcript	BC037032	ENSMUST00000187080	antisense		15	-1	4027152	508
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000147707	protein_coding		2	1	32288351	814
ENSMUSG00000113313	antisense	Gm32036	ENSMUST00000221484	antisense		13	-1	20473490	2638
ENSMUSG00000044921	protein_coding	Rassf9	ENSMUST00000219445	protein_coding	principal1	10	1	102512222	5294
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000128079	retained_intron		17	1	28315653	816
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000129193	protein_coding		2	1	32288355	847
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000146104	nonsense_mediated_decay		17	1	28316125	1197
ENSMUSG00000044921	protein_coding	Rassf9	ENSMUST00000220230	retained_intron		10	1	102512256	2227
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000138760	protein_coding		7	1	96210154	704
ENSMUSG00000044921	protein_coding	Rassf9	ENSMUST00000055355	protein_coding		10	1	102540248	1526
ENSMUSG00000064215	protein_coding	Ifi27	ENSMUST00000122905	retained_intron		12	1	103434245	625
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000151312	retained_intron		17	1	28317050	770
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000140404	processed_transcript		17	1	28317506	398
ENSMUSG00000045967	protein_coding	Gpr158	ENSMUST00000155760	retained_intron		2	1	21367567	3580
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000123248	protein_coding		17	1	28317561	638
ENSMUSG00000080846	processed_pseudogene	Gm13379	ENSMUST00000118053	processed_pseudogene		2	-1	21443529	621
ENSMUSG00000047281	protein_coding	Sfn	ENSMUST00000057311	protein_coding	principal1	4	-1	133602168	1613
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000141648	retained_intron		17	1	28317860	404
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000068747	protein_coding		2	1	90940543	7614
ENSMUSG00000046312	protein_coding	Myorg	ENSMUST00000054920	protein_coding	principal1	4	-1	41503076	4173
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000156505	protein_coding		17	1	28318105	672
ENSMUSG00000103553	TEC	Gm38218	ENSMUST00000193555	TEC		1	-1	66825914	4689
ENSMUSG00000064215	protein_coding	Ifi27	ENSMUST00000085065	protein_coding	alternative2	12	1	103434259	977
ENSMUSG00000007570	protein_coding	Fance	ENSMUST00000156569	processed_transcript		17	1	28318455	536
ENSMUSG00000046312	protein_coding	Myorg	ENSMUST00000149596	protein_coding		4	-1	41502668	725
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000133657	processed_transcript		2	1	90965092	271
ENSMUSG00000064215	protein_coding	Ifi27	ENSMUST00000148824	retained_intron		12	1	103434285	629
ENSMUSG00000064215	protein_coding	Ifi27	ENSMUST00000140838	protein_coding		12	1	103434292	410
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000107166	protein_coding		7	1	96210637	13172
ENSMUSG00000010936	protein_coding	Vac14	ENSMUST00000034190	protein_coding	principal1	8	1	110618599	3069
ENSMUSG00000109981	lincRNA	Gm36849	ENSMUST00000210345	lincRNA		7	1	136353364	680
ENSMUSG00000064215	protein_coding	Ifi27	ENSMUST00000153670	retained_intron		12	1	103437627	527
ENSMUSG00000109894	processed_pseudogene	Gm5904	ENSMUST00000210286	processed_pseudogene		7	1	136657209	865
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000126276	retained_intron		2	1	32297080	4049
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000149141	retained_intron		2	1	32298789	405
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000107165	protein_coding	principal1	7	1	96211671	10930
ENSMUSG00000107477	sense_intronic	Gm44366	ENSMUST00000204933	sense_intronic		6	-1	134892067	674
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000146544	retained_intron		2	1	32301212	818
ENSMUSG00000110101	lincRNA	Gm6249	ENSMUST00000211142	lincRNA		7	-1	136710604	3314
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000239474	protein_coding	principal4	2	1	32288253	4442
ENSMUSG00000002546	protein_coding	Golga2	ENSMUST00000113377	protein_coding	alternative2	2	1	32288253	4361
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000129737	protein_coding		7	1	96522398	397
ENSMUSG00000025189	protein_coding	Cnnm1	ENSMUST00000223787	protein_coding	alternative2	19	1	43440436	2931
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000111452	protein_coding	principal1	2	1	90987620	7800
ENSMUSG00000010936	protein_coding	Vac14	ENSMUST00000212663	processed_transcript		8	1	110618603	2605
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000131541	retained_intron		7	1	96644172	3560
ENSMUSG00000048574	processed_pseudogene	Ccnb1-ps	ENSMUST00000155338	processed_pseudogene		7	-1	42107185	1287
ENSMUSG00000010936	protein_coding	Vac14	ENSMUST00000212766	retained_intron		8	1	110618608	2305
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000140140	protein_coding		7	1	96777934	500
ENSMUSG00000025189	protein_coding	Cnnm1	ENSMUST00000165311	protein_coding	principal2	19	1	43440436	5037
ENSMUSG00000010936	protein_coding	Vac14	ENSMUST00000212829	nonsense_mediated_decay		8	1	110618612	5494
ENSMUSG00000010936	protein_coding	Vac14	ENSMUST00000213015	retained_intron		8	1	110645580	2333
ENSMUSG00000025189	protein_coding	Cnnm1	ENSMUST00000225254	processed_transcript		19	1	43471674	523
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000130299	processed_transcript		7	1	96796641	1367
ENSMUSG00000034290	protein_coding	Nek9	ENSMUST00000040992	protein_coding	principal1	12	-1	85339362	5386
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000111449	protein_coding		2	1	90998579	4441
ENSMUSG00000025189	protein_coding	Cnnm1	ENSMUST00000225191	retained_intron		19	1	43493516	318
ENSMUSG00000114721	antisense	Gm47938	ENSMUST00000225421	antisense		19	-1	43469758	694
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000111448	protein_coding		2	1	90998579	4432
ENSMUSG00000108525	processed_pseudogene	Gm7443	ENSMUST00000206355	processed_pseudogene		6	-1	83792979	378
ENSMUSG00000048078	protein_coding	Tenm4	ENSMUST00000147659	retained_intron		7	1	96796641	1301
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000127385	processed_transcript		2	1	91012489	489
ENSMUSG00000084226	processed_pseudogene	Gm13426	ENSMUST00000117887	processed_pseudogene		2	-1	31552695	795
ENSMUSG00000100528	lincRNA	Gm28881	ENSMUST00000187710	lincRNA		10	-1	65120367	470
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000123765	protein_coding		4	-1	123369931	2613
ENSMUSG00000112114	processed_pseudogene	Gm7540	ENSMUST00000219764	processed_pseudogene		10	1	65416746	926
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000005643	protein_coding	principal1	2	1	90940397	4830
ENSMUSG00000112341	processed_pseudogene	Gm4796	ENSMUST00000219802	processed_pseudogene		10	1	65534654	624
ENSMUSG00000112720	processed_pseudogene	Gm19116	ENSMUST00000218592	processed_pseudogene		10	-1	65772199	642
ENSMUSG00000008036	protein_coding	Ap2s1	ENSMUST00000086112	protein_coding	principal1	7	1	16738410	836
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000111455	protein_coding	principal1	2	1	90987746	7579
ENSMUSG00000008036	protein_coding	Ap2s1	ENSMUST00000205607	protein_coding		7	1	16738444	372
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000111451	protein_coding		2	1	90940397	4678
ENSMUSG00000005506	protein_coding	Celf1	ENSMUST00000177642	protein_coding		2	1	90940397	7806
ENSMUSG00000025759	protein_coding	Mfsd8	ENSMUST00000026859	protein_coding	principal1	3	-1	40846885	3151
ENSMUSG00000025759	protein_coding	Mfsd8	ENSMUST00000204054	nonsense_mediated_decay		3	-1	40846802	1314
ENSMUSG00000008036	protein_coding	Ap2s1	ENSMUST00000205590	nonsense_mediated_decay		7	1	16738472	504
ENSMUSG00000008036	protein_coding	Ap2s1	ENSMUST00000205673	processed_transcript		7	1	16738538	374
ENSMUSG00000021681	protein_coding	Aggf1	ENSMUST00000022189	protein_coding	principal1	13	-1	95375352	3249
ENSMUSG00000008036	protein_coding	Ap2s1	ENSMUST00000141496	retained_intron		7	1	16746764	1054
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000125882	protein_coding		18	1	74440936	646
ENSMUSG00000025759	protein_coding	Mfsd8	ENSMUST00000204399	nonsense_mediated_decay		3	-1	40846694	692
ENSMUSG00000025759	protein_coding	Mfsd8	ENSMUST00000204454	retained_intron		3	-1	40830966	3515
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000135878	processed_transcript		18	1	74440964	862
ENSMUSG00000025759	protein_coding	Mfsd8	ENSMUST00000204907	protein_coding		3	-1	40846534	802
ENSMUSG00000006784	protein_coding	Ttc25	ENSMUST00000092684	protein_coding	principal2	11	1	100545607	2240
ENSMUSG00000025759	protein_coding	Mfsd8	ENSMUST00000204017	protein_coding		3	-1	40846816	220
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000149022	protein_coding		4	-1	123366449	2222
ENSMUSG00000021681	protein_coding	Aggf1	ENSMUST00000161671	processed_transcript		13	-1	95375334	2559
ENSMUSG00000025759	protein_coding	Mfsd8	ENSMUST00000204374	retained_intron		3	-1	40846886	3045
ENSMUSG00000107892	processed_pseudogene	Gm44524	ENSMUST00000203899	processed_pseudogene		3	-1	40877247	271
ENSMUSG00000107741	transcribed_unprocessed_pseudogene	Gm2011	ENSMUST00000203124	retained_intron		3	1	40846820	1263
ENSMUSG00000028631	protein_coding	Kcnq4	ENSMUST00000030376	protein_coding	principal1	4	-1	120747248	3919
ENSMUSG00000070683	protein_coding	Lactbl1	ENSMUST00000178843	protein_coding	principal1	4	1	136622621	2954
ENSMUSG00000021798	protein_coding	Ldb3	ENSMUST00000022327	protein_coding	principal4	14	-1	34588664	5119
ENSMUSG00000028631	protein_coding	Kcnq4	ENSMUST00000129478	processed_transcript		4	-1	120748612	736
ENSMUSG00000082405	processed_pseudogene	Gm16021	ENSMUST00000121176	processed_pseudogene		11	-1	73226266	219
ENSMUSG00000095653	protein_coding	Gm21818	ENSMUST00000225144	protein_coding	principal1	13	1	120172433	894
ENSMUSG00000006784	protein_coding	Ttc25	ENSMUST00000132143	retained_intron		11	1	100545694	4340
ENSMUSG00000095653	protein_coding	Gm21818	ENSMUST00000178828	protein_coding	principal1	13	1	120173184	513
ENSMUSG00000006784	protein_coding	Ttc25	ENSMUST00000006976	protein_coding	alternative2	11	1	100545694	2673
ENSMUSG00000114398	processed_pseudogene	Gm20763	ENSMUST00000225106	processed_pseudogene		13	1	120194514	1858
ENSMUSG00000107741	transcribed_unprocessed_pseudogene	Gm2011	ENSMUST00000203919	processed_transcript		3	1	40847002	542
ENSMUSG00000006784	protein_coding	Ttc25	ENSMUST00000150331	retained_intron		11	1	100545710	607
ENSMUSG00000103119	TEC	Gm37583	ENSMUST00000195460	TEC		4	1	136639582	2487
ENSMUSG00000107741	transcribed_unprocessed_pseudogene	Gm2011	ENSMUST00000203750	transcribed_unprocessed_pseudogene		3	1	40857856	435
ENSMUSG00000006784	protein_coding	Ttc25	ENSMUST00000127389	retained_intron		11	1	100549547	532
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000046255	protein_coding	principal1	6	-1	134897858	1610
ENSMUSG00000107741	transcribed_unprocessed_pseudogene	Gm2011	ENSMUST00000203535	processed_transcript		3	1	40862165	3023
ENSMUSG00000099592	processed_pseudogene	Gm5264	ENSMUST00000190584	processed_pseudogene		1	-1	95256810	848
ENSMUSG00000073927	protein_coding	Olfr652	ENSMUST00000219111	protein_coding	principal1	7	1	104560901	5329
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000066107	protein_coding		6	-1	134887832	1647
ENSMUSG00000109322	protein_coding	Olfr1283	ENSMUST00000204064	protein_coding	principal1	2	1	111366790	1625
ENSMUSG00000073927	protein_coding	Olfr652	ENSMUST00000215410	protein_coding	principal1	7	1	104560901	4672
ENSMUSG00000109322	protein_coding	Olfr1283	ENSMUST00000216637	protein_coding	principal1	2	1	111366790	1689
ENSMUSG00000073927	protein_coding	Olfr652	ENSMUST00000216131	protein_coding	principal1	7	1	104560901	4773
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000215088	protein_coding		6	-1	134887785	1484
ENSMUSG00000109322	protein_coding	Olfr1283	ENSMUST00000090328	protein_coding	principal1	2	1	111368591	1026
ENSMUSG00000073927	protein_coding	Olfr652	ENSMUST00000098175	protein_coding	principal1	7	1	104564152	1061
ENSMUSG00000035455	protein_coding	Fignl1	ENSMUST00000047689	protein_coding	principal1	11	-1	11808959	2961
ENSMUSG00000035455	protein_coding	Fignl1	ENSMUST00000109664	protein_coding	principal1	11	-1	11808932	2807
ENSMUSG00000094027	protein_coding	Gm21762	ENSMUST00000225881	protein_coding	principal1	13	-1	120215947	830
ENSMUSG00000094027	protein_coding	Gm21762	ENSMUST00000177561	protein_coding	principal1	13	-1	120215213	456
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000111932	protein_coding		6	-1	134897863	1711
ENSMUSG00000038650	protein_coding	Rnh1	ENSMUST00000210314	protein_coding	alternative2	7	-1	141168689	1658
ENSMUSG00000039477	protein_coding	Tnrc18	ENSMUST00000152247	protein_coding		5	-1	142788523	9342
ENSMUSG00000035455	protein_coding	Fignl1	ENSMUST00000152345	processed_transcript		11	-1	11808925	2092
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000203409	protein_coding		6	-1	134897825	679
ENSMUSG00000035455	protein_coding	Fignl1	ENSMUST00000150714	protein_coding		11	-1	11808948	421
ENSMUSG00000063846	protein_coding	Gm21731	ENSMUST00000223770	protein_coding	principal1	13	1	120239111	886
ENSMUSG00000063846	protein_coding	Gm21731	ENSMUST00000079524	protein_coding		13	1	120240670	489
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000156931	retained_intron		1	-1	58424066	4865
ENSMUSG00000039477	protein_coding	Tnrc18	ENSMUST00000198932	processed_transcript		5	-1	142736681	600
ENSMUSG00000035455	protein_coding	Fignl1	ENSMUST00000123815	processed_transcript		11	-1	11801461	770
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000204880	protein_coding		6	-1	134897815	528
ENSMUSG00000035455	protein_coding	Fignl1	ENSMUST00000171080	protein_coding	principal1	11	-1	11808962	2844
ENSMUSG00000039477	protein_coding	Tnrc18	ENSMUST00000196888	retained_intron		5	-1	142737224	647
ENSMUSG00000073926	protein_coding	Olfr653	ENSMUST00000217466	protein_coding	principal1	7	1	104577314	4786
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000203762	protein_coding		6	-1	134887768	498
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000021750	protein_coding	principal2	13	-1	12106945	16814
ENSMUSG00000073926	protein_coding	Olfr653	ENSMUST00000215585	protein_coding	principal1	7	1	104577314	4765
ENSMUSG00000035455	protein_coding	Fignl1	ENSMUST00000171938	protein_coding	principal1	11	-1	11808962	2974
ENSMUSG00000037259	protein_coding	Dzank1	ENSMUST00000081982	protein_coding	principal2	2	-1	144527414	6847
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000222113	retained_intron		13	-1	11584594	920
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000222788	retained_intron		13	-1	11584954	3794
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000221527	protein_coding		13	-1	11646608	3086
ENSMUSG00000073926	protein_coding	Olfr653	ENSMUST00000098174	protein_coding	principal1	7	1	104579624	1046
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000221916	retained_intron		13	-1	11646542	1316
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000149375	protein_coding		6	-1	134897887	652
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000220712	protein_coding		13	-1	11660235	1106
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000156379	protein_coding		6	-1	134897084	429
ENSMUSG00000037259	protein_coding	Dzank1	ENSMUST00000124823	retained_intron		2	-1	144527364	2038
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000221941	retained_intron		13	-1	11687915	4117
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000221890	retained_intron		13	-1	11731728	1196
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000221609	retained_intron		13	-1	11750834	626
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000222386	retained_intron		13	-1	11772516	891
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000204908	protein_coding		6	-1	134898578	457
ENSMUSG00000037259	protein_coding	Dzank1	ENSMUST00000150816	processed_transcript		2	-1	144526648	288
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000139787	processed_transcript		1	-1	58412861	556
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000220597	protein_coding		13	-1	12106945	4924
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000221018	retained_intron		13	-1	11829654	1572
ENSMUSG00000110475	antisense	Gm31036	ENSMUST00000212925	antisense		8	1	95138310	521
ENSMUSG00000095071	protein_coding	AF067061	ENSMUST00000181748	protein_coding	principal1	13	1	120263114	881
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000221341	retained_intron		13	-1	12106459	1335
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000141570	processed_transcript		1	-1	58413437	923
ENSMUSG00000110516	TEC	Gm45758	ENSMUST00000212448	TEC		8	-1	95090676	1006
ENSMUSG00000021313	protein_coding	Ryr2	ENSMUST00000170156	protein_coding	alternative2	13	-1	12106945	16813
ENSMUSG00000018995	protein_coding	Nars2	ENSMUST00000044466	protein_coding	principal1	7	1	96951505	3778
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000123580	retained_intron		1	-1	58416765	2102
ENSMUSG00000037259	protein_coding	Dzank1	ENSMUST00000163701	protein_coding	alternative2	2	-1	144527398	6834
ENSMUSG00000095071	protein_coding	AF067061	ENSMUST00000179905	protein_coding	principal1	13	1	120263191	1174
ENSMUSG00000113269	TEC	Gm47494	ENSMUST00000221204	TEC		13	-1	11821734	3487
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000152140	processed_transcript		6	-1	134897925	610
ENSMUSG00000049460	processed_pseudogene	Gm8396	ENSMUST00000057361	processed_pseudogene		14	1	7801208	823
ENSMUSG00000018995	protein_coding	Nars2	ENSMUST00000149204	processed_transcript		7	1	96951521	606
ENSMUSG00000052229	protein_coding	Gpr17	ENSMUST00000064016	protein_coding	principal1	18	-1	31949636	5195
ENSMUSG00000018995	protein_coding	Nars2	ENSMUST00000107159	protein_coding		7	1	96951562	1777
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000165392	protein_coding		6	-1	134897815	1643
ENSMUSG00000039477	protein_coding	Tnrc18	ENSMUST00000151477	protein_coding	principal1	5	-1	142817662	6487
ENSMUSG00000043993	processed_transcript	2900052L18Rik	ENSMUST00000139014	processed_transcript		11	-1	120231585	1588
ENSMUSG00000018995	protein_coding	Nars2	ENSMUST00000122835	nonsense_mediated_decay		7	1	97023669	780
ENSMUSG00000094796	protein_coding	BC147527	ENSMUST00000225029	protein_coding	principal1	13	1	120300392	1595
ENSMUSG00000051790	protein_coding	Nlgn2	ENSMUST00000056484	protein_coding	principal1	11	-1	69834849	5003
ENSMUSG00000018995	protein_coding	Nars2	ENSMUST00000206109	retained_intron		7	1	97037601	3266
ENSMUSG00000094796	protein_coding	BC147527	ENSMUST00000081558	protein_coding	principal1	13	1	120308146	504
ENSMUSG00000078180	processed_pseudogene	Gm20900	ENSMUST00000078729	processed_pseudogene		13	-1	120304665	472
ENSMUSG00000018995	protein_coding	Nars2	ENSMUST00000150681	nonsense_mediated_decay		7	1	97040004	623
ENSMUSG00000091827	protein_coding	Speer4f2	ENSMUST00000166086	protein_coding	principal1	5	1	17373180	1278
ENSMUSG00000039477	protein_coding	Tnrc18	ENSMUST00000200371	retained_intron		5	-1	142766022	830
ENSMUSG00000032641	protein_coding	Gpr19	ENSMUST00000116515	protein_coding		6	-1	134897925	2075
ENSMUSG00000038650	protein_coding	Rnh1	ENSMUST00000106033	protein_coding	principal3	7	-1	141169226	2091
ENSMUSG00000092457	unprocessed_pseudogene	Gm8835	ENSMUST00000173096	unprocessed_pseudogene		17	-1	36206339	1169
ENSMUSG00000095821	protein_coding	Tcstv3	ENSMUST00000223967	protein_coding	principal1	13	1	120316878	779
ENSMUSG00000095821	protein_coding	Tcstv3	ENSMUST00000178349	protein_coding	principal1	13	1	120317567	510
ENSMUSG00000039477	protein_coding	Tnrc18	ENSMUST00000155461	processed_transcript		5	-1	142800437	712
ENSMUSG00000039477	protein_coding	Tnrc18	ENSMUST00000198181	protein_coding		5	-1	142817380	696
ENSMUSG00000092265	unprocessed_pseudogene	Gm5682	ENSMUST00000173402	unprocessed_pseudogene		17	-1	36211184	505
ENSMUSG00000051790	protein_coding	Nlgn2	ENSMUST00000108634	protein_coding	principal1	11	-1	69837784	5568
ENSMUSG00000021798	protein_coding	Ldb3	ENSMUST00000090040	protein_coding	alternative2	14	-1	34588660	4981
ENSMUSG00000110126	processed_pseudogene	Gm9347	ENSMUST00000211473	processed_pseudogene		7	1	136810909	1607
ENSMUSG00000092362	unprocessed_pseudogene	Gm20392	ENSMUST00000173047	unprocessed_pseudogene		17	-1	36216412	701
ENSMUSG00000038650	protein_coding	Rnh1	ENSMUST00000167493	protein_coding	principal3	7	-1	141172857	1656
ENSMUSG00000073925	protein_coding	Olfr654	ENSMUST00000213984	protein_coding	principal1	7	1	104587025	3063
ENSMUSG00000051790	protein_coding	Nlgn2	ENSMUST00000139893	protein_coding		11	-1	69834259	784
ENSMUSG00000100876	antisense	2810454H06Rik	ENSMUST00000189942	antisense		6	1	134897961	3148
ENSMUSG00000051790	protein_coding	Nlgn2	ENSMUST00000140477	retained_intron		11	-1	69828559	355
ENSMUSG00000038650	protein_coding	Rnh1	ENSMUST00000209378	protein_coding		7	-1	141168128	838
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000119962	protein_coding	alternative2	10	1	41476314	3565
ENSMUSG00000073925	protein_coding	Olfr654	ENSMUST00000210457	protein_coding	principal1	7	1	104587719	1156
ENSMUSG00000038650	protein_coding	Rnh1	ENSMUST00000210979	protein_coding		7	-1	141168191	445
ENSMUSG00000073925	protein_coding	Olfr654	ENSMUST00000098173	protein_coding		7	1	104587719	1155
ENSMUSG00000082769	processed_pseudogene	Gm15793	ENSMUST00000121857	processed_pseudogene		1	-1	66849602	495
ENSMUSG00000116552	processed_pseudogene	Gm34396	ENSMUST00000232130	processed_pseudogene		16	1	89183315	183
ENSMUSG00000104639	sense_intronic	Gm42939	ENSMUST00000197514	sense_intronic		3	1	101407793	2205
ENSMUSG00000105611	sense_intronic	Gm42938	ENSMUST00000198414	sense_intronic		3	1	101411539	1072
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000073899	protein_coding	alternative1	19	1	10389090	1605
ENSMUSG00000091039	protein_coding	Krtap20-2	ENSMUST00000169954	protein_coding	principal1	16	1	89205861	534
ENSMUSG00000051182	protein_coding	Olfr655	ENSMUST00000215434	processed_transcript		7	-1	104601779	1306
ENSMUSG00000113488	antisense	Gm47819	ENSMUST00000222051	antisense		12	1	85374117	220
ENSMUSG00000021798	protein_coding	Ldb3	ENSMUST00000022328	protein_coding	alternative2	14	-1	34588634	2468
ENSMUSG00000051182	protein_coding	Olfr655	ENSMUST00000216750	protein_coding	principal1	7	-1	104601744	2010
ENSMUSG00000051182	protein_coding	Olfr655	ENSMUST00000215538	protein_coding	principal1	7	-1	104601779	2012
ENSMUSG00000021248	protein_coding	Tmed10	ENSMUST00000222529	retained_intron		12	-1	85350920	3181
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000154824	protein_coding		4	-1	123372367	2808
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000233994	protein_coding		18	1	31922290	685
ENSMUSG00000042035	protein_coding	Igsf3	ENSMUST00000198995	retained_intron		3	1	101377083	1855
ENSMUSG00000051182	protein_coding	Olfr655	ENSMUST00000057385	protein_coding	principal1	7	-1	104597179	927
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000134010	retained_intron		10	1	41476336	3645
ENSMUSG00000058368	protein_coding	Krtap21-1	ENSMUST00000078422	protein_coding	principal1	16	-1	89403868	651
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000234549	processed_transcript		18	1	31922309	430
ENSMUSG00000062433	protein_coding	Krtap6-2	ENSMUST00000082065	protein_coding	principal1	16	-1	89420111	786
ENSMUSG00000073924	protein_coding	Olfr656	ENSMUST00000215575	protein_coding	alternative2	7	1	104613955	4091
ENSMUSG00000054612	protein_coding	Mgmt	ENSMUST00000081510	protein_coding	principal1	7	1	136894614	2894
ENSMUSG00000021798	protein_coding	Ldb3	ENSMUST00000064098	protein_coding	alternative2	14	-1	34588645	2299
ENSMUSG00000073924	protein_coding	Olfr656	ENSMUST00000098172	protein_coding	principal2	7	1	104617657	991
ENSMUSG00000109721	TEC	Gm45280	ENSMUST00000210484	TEC		7	1	136920941	2552
ENSMUSG00000059632	protein_coding	Krtap8-1	ENSMUST00000072280	protein_coding	principal1	16	-1	89487952	574
ENSMUSG00000110174	processed_pseudogene	Gm45499	ENSMUST00000211656	processed_pseudogene		7	1	137167820	280
ENSMUSG00000024873	protein_coding	Cnih2	ENSMUST00000025805	protein_coding	principal1	19	-1	5098521	1343
ENSMUSG00000021798	protein_coding	Ldb3	ENSMUST00000228044	protein_coding	alternative2	14	-1	34588481	1883
ENSMUSG00000021248	protein_coding	Tmed10	ENSMUST00000040766	protein_coding	principal1	12	-1	85374847	1482
ENSMUSG00000074063	protein_coding	Osgin1	ENSMUST00000131448	protein_coding		8	1	119434124	747
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000225861	processed_transcript		19	1	10389430	697
ENSMUSG00000073923	protein_coding	Olfr657	ENSMUST00000215454	protein_coding	principal1	7	1	104624794	2397
ENSMUSG00000073923	protein_coding	Olfr657	ENSMUST00000213297	protein_coding	principal1	7	1	104624794	1948
ENSMUSG00000021248	protein_coding	Tmed10	ENSMUST00000222585	protein_coding		12	-1	85373955	619
ENSMUSG00000056706	protein_coding	Krtap7-1	ENSMUST00000056118	protein_coding	principal1	16	-1	89508323	621
ENSMUSG00000021798	protein_coding	Ldb3	ENSMUST00000227819	protein_coding		14	-1	34588682	1499
ENSMUSG00000021248	protein_coding	Tmed10	ENSMUST00000223375	retained_intron		12	-1	85374690	2361
ENSMUSG00000073923	protein_coding	Olfr657	ENSMUST00000098171	protein_coding	principal1	7	1	104635676	960
ENSMUSG00000024873	protein_coding	Cnih2	ENSMUST00000235638	nonsense_mediated_decay		19	-1	5098382	971
ENSMUSG00000113072	processed_pseudogene	Gm47820	ENSMUST00000220964	processed_pseudogene		12	1	85356584	594
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000225019	retained_intron		19	1	10389431	479
ENSMUSG00000110275	processed_pseudogene	Gm5905	ENSMUST00000211731	processed_pseudogene		7	-1	141178464	580
ENSMUSG00000113752	TEC	Gm47817	ENSMUST00000222887	TEC		12	-1	85363645	3153
ENSMUSG00000037907	protein_coding	Ankrd13b	ENSMUST00000145934	protein_coding		11	-1	77476436	2824
ENSMUSG00000026003	protein_coding	Acadl	ENSMUST00000027153	protein_coding	principal1	1	-1	66863277	1916
ENSMUSG00000091212	protein_coding	Krtap11-1	ENSMUST00000171542	protein_coding	principal1	16	-1	89571183	1008
ENSMUSG00000021798	protein_coding	Ldb3	ENSMUST00000022330	protein_coding		14	-1	34588663	1586
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000087315	protein_coding	principal1	17	1	35000987	4137
ENSMUSG00000116870	lincRNA	Gm49696	ENSMUST00000231309	lincRNA		16	1	89584535	464
ENSMUSG00000021798	protein_coding	Ldb3	ENSMUST00000226226	processed_transcript		14	-1	34576994	17
ENSMUSG00000022668	protein_coding	Gtpbp8	ENSMUST00000162512	protein_coding	principal1	16	-1	44746363	3415
ENSMUSG00000026003	protein_coding	Acadl	ENSMUST00000139208	processed_transcript		1	-1	66858331	649
ENSMUSG00000102751	TEC	Gm37057	ENSMUST00000192624	TEC		1	1	137252142	1916
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000173584	protein_coding		17	1	35001051	4048
ENSMUSG00000102738	TEC	1700006P03Rik	ENSMUST00000191810	TEC		1	-1	137325842	409
ENSMUSG00000103070	TEC	Gm37903	ENSMUST00000192122	TEC		1	-1	137531230	2381
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000174260	protein_coding		17	1	35001317	819
ENSMUSG00000074063	protein_coding	Osgin1	ENSMUST00000152420	protein_coding	principal1	8	1	119437118	2005
ENSMUSG00000110142	TEC	Gm45872	ENSMUST00000209804	TEC		8	-1	80729137	1584
ENSMUSG00000103728	TEC	Gm37099	ENSMUST00000191902	TEC		1	-1	137767527	3451
ENSMUSG00000104112	TEC	Gm37293	ENSMUST00000191658	TEC		1	1	137811849	295
ENSMUSG00000036022	protein_coding	Fam122b	ENSMUST00000114838	protein_coding	alternative2	X	-1	53269020	3536
ENSMUSG00000022668	protein_coding	Gtpbp8	ENSMUST00000023348	protein_coding		16	-1	44746359	836
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000172570	protein_coding		17	1	35002657	423
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000025254	protein_coding	principal1	18	1	31931325	1870
ENSMUSG00000083885	processed_pseudogene	Gm13213	ENSMUST00000119668	processed_pseudogene		4	-1	133638683	474
ENSMUSG00000022668	protein_coding	Gtpbp8	ENSMUST00000161436	protein_coding		16	-1	44746283	739
ENSMUSG00000074063	protein_coding	Osgin1	ENSMUST00000126414	processed_transcript		8	1	119437122	381
ENSMUSG00000022668	protein_coding	Gtpbp8	ENSMUST00000162479	nonsense_mediated_decay		16	-1	44746309	583
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000225404	nonsense_mediated_decay		18	1	31931346	805
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000099934	protein_coding		10	1	41476368	3292
ENSMUSG00000074063	protein_coding	Osgin1	ENSMUST00000212112	protein_coding		8	1	119437149	389
ENSMUSG00000036022	protein_coding	Fam122b	ENSMUST00000114841	protein_coding	alternative2	X	-1	53269798	3074
ENSMUSG00000024875	protein_coding	Yif1a	ENSMUST00000237603	nonsense_mediated_decay		19	1	5088538	1036
ENSMUSG00000034139	protein_coding	Serpini2	ENSMUST00000039047	protein_coding	principal1	3	-1	75270078	1411
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000225470	processed_transcript		18	1	31935514	436
ENSMUSG00000074063	protein_coding	Osgin1	ENSMUST00000098365	protein_coding		8	1	119437162	1959
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000234678	processed_transcript		18	1	31937276	410
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000224383	protein_coding		18	1	31939418	557
ENSMUSG00000074063	protein_coding	Osgin1	ENSMUST00000145604	retained_intron		8	1	119437167	2302
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000126436	nonsense_mediated_decay		10	1	41476377	3408
ENSMUSG00000098145	lincRNA	Gm26936	ENSMUST00000182424	lincRNA		1	-1	137969240	382
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000226112	processed_transcript		18	1	31954096	175
ENSMUSG00000098145	lincRNA	Gm26936	ENSMUST00000182680	lincRNA		1	-1	137969215	219
ENSMUSG00000074063	protein_coding	Osgin1	ENSMUST00000144381	retained_intron		8	1	119437189	817
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000151486	protein_coding		10	1	41477079	418
ENSMUSG00000104197	TEC	Gm37632	ENSMUST00000191811	TEC		1	1	137971174	1142
ENSMUSG00000036022	protein_coding	Fam122b	ENSMUST00000143069	processed_transcript		X	-1	53269805	2038
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000225400	retained_intron		18	1	31954344	415
ENSMUSG00000103427	TEC	Gm37534	ENSMUST00000194483	TEC		1	1	137949422	5222
ENSMUSG00000033382	protein_coding	Trappc8	ENSMUST00000225661	protein_coding	alternative2	18	-1	20896093	5194
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000130838	retained_intron		10	1	41478478	726
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000223753	protein_coding		18	1	31954834	627
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000125730	retained_intron		10	1	41479988	423
ENSMUSG00000031787	protein_coding	Katnb1	ENSMUST00000034239	protein_coding	principal1	8	1	95081186	3777
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000136681	retained_intron		10	1	41481707	696
ENSMUSG00000033382	protein_coding	Trappc8	ENSMUST00000225502	retained_intron		18	-1	20832738	3583
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000125099	retained_intron		10	1	41484074	677
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000225125	processed_transcript		18	1	31955051	491
ENSMUSG00000024395	protein_coding	Lims2	ENSMUST00000224328	protein_coding		18	1	31956333	450
ENSMUSG00000104145	TEC	D130019J16Rik	ENSMUST00000193261	TEC		1	1	137935189	2158
ENSMUSG00000087642	IG_C_gene	Ighe	ENSMUST00000223335	IG_C_gene	principal5	12	-1	113273248	1460
ENSMUSG00000098243	processed_transcript	Gm4258	ENSMUST00000187561	retained_intron		1	1	137898595	1135
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000123798	retained_intron		10	1	41486111	488
ENSMUSG00000033382	protein_coding	Trappc8	ENSMUST00000223584	retained_intron		18	-1	20856767	4263
ENSMUSG00000087642	IG_C_gene	Ighe	ENSMUST00000137336	IG_C_gene	alternative2	12	-1	113273248	1367
ENSMUSG00000037907	protein_coding	Ankrd13b	ENSMUST00000037593	protein_coding	alternative2	11	-1	77489666	3105
ENSMUSG00000083355	processed_pseudogene	Gm11581	ENSMUST00000122024	processed_pseudogene		1	1	60809116	763
ENSMUSG00000042035	protein_coding	Igsf3	ENSMUST00000043983	protein_coding	principal2	3	1	101377083	7371
ENSMUSG00000036022	protein_coding	Fam122b	ENSMUST00000071023	protein_coding	principal3	X	-1	53269805	4334
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000172637	retained_intron		17	1	35002714	3731
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000138657	retained_intron		10	1	41486372	537
ENSMUSG00000005045	protein_coding	Chd5	ENSMUST00000005175	protein_coding	alternative2	4	1	152338887	9122
ENSMUSG00000098243	processed_transcript	Gm4258	ENSMUST00000182127	lincRNA		1	1	137898598	506
ENSMUSG00000102549	TEC	Gm38137	ENSMUST00000193735	TEC		1	1	60880338	1401
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000172656	retained_intron		17	1	35004294	475
ENSMUSG00000005045	protein_coding	Chd5	ENSMUST00000136134	processed_transcript		4	1	152341595	280
ENSMUSG00000042035	protein_coding	Igsf3	ENSMUST00000195164	protein_coding	alternative2	3	1	101378338	3876
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000172741	retained_intron		17	1	35004712	347
ENSMUSG00000033382	protein_coding	Trappc8	ENSMUST00000097658	protein_coding	principal3	18	-1	20896078	2703
ENSMUSG00000106137	antisense	Gm42538	ENSMUST00000199431	antisense		3	-1	101425653	358
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000173911	retained_intron		17	1	35011215	746
ENSMUSG00000106137	antisense	Gm42538	ENSMUST00000196233	antisense		3	-1	101426936	566
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000173336	retained_intron		17	1	35012164	557
ENSMUSG00000033382	protein_coding	Trappc8	ENSMUST00000224530	protein_coding		18	-1	20862923	336
ENSMUSG00000037907	protein_coding	Ankrd13b	ENSMUST00000143872	retained_intron		11	-1	77473625	2290
ENSMUSG00000098206	lincRNA	Mir181a-1hg	ENSMUST00000182158	lincRNA		1	1	137966531	3388
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000172999	retained_intron		17	1	35013283	806
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000173142	protein_coding		17	1	35013827	388
ENSMUSG00000101221	unprocessed_pseudogene	Gm21881	ENSMUST00000188591	unprocessed_pseudogene		Y	-1	85814909	696
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000173302	retained_intron		17	1	35013836	744
ENSMUSG00000104118	TEC	Gm37298	ENSMUST00000193770	TEC		1	1	137909291	3868
ENSMUSG00000007029	protein_coding	Vars	ENSMUST00000174084	retained_intron		17	1	35014965	826
ENSMUSG00000103038	TEC	Gm37124	ENSMUST00000192140	TEC		1	1	137924388	1992
ENSMUSG00000019823	protein_coding	Mical1	ENSMUST00000019967	protein_coding	principal2	10	1	41476314	3563
ENSMUSG00000099992	unprocessed_pseudogene	Gm21435	ENSMUST00000187508	unprocessed_pseudogene		Y	-1	85889645	696
ENSMUSG00000037907	protein_coding	Ankrd13b	ENSMUST00000135227	retained_intron		11	-1	77476765	1662
ENSMUSG00000098045	lincRNA	Gm26979	ENSMUST00000182971	lincRNA		1	-1	137921312	217
ENSMUSG00000024875	protein_coding	Yif1a	ENSMUST00000238093	protein_coding		19	1	5088545	1018
ENSMUSG00000037907	protein_coding	Ankrd13b	ENSMUST00000127291	protein_coding		11	-1	77476247	639
ENSMUSG00000031787	protein_coding	Katnb1	ENSMUST00000212968	nonsense_mediated_decay		8	1	95082596	4551
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000169121	protein_coding		19	1	10389431	2116
ENSMUSG00000102277	TEC	A130050O07Rik	ENSMUST00000191963	TEC		1	1	137927251	3023
ENSMUSG00000030347	protein_coding	D6Wsu163e	ENSMUST00000202086	retained_intron		6	1	126939962	4107
ENSMUSG00000060961	protein_coding	Slc4a4	ENSMUST00000239214	protein_coding		5	1	88886486	4212
ENSMUSG00000102277	TEC	A130050O07Rik	ENSMUST00000192622	TEC		1	1	137928170	2104
ENSMUSG00000031787	protein_coding	Katnb1	ENSMUST00000212528	retained_intron		8	1	95087081	799
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000034868	protein_coding	principal1	1	-1	58424066	1796
ENSMUSG00000037907	protein_coding	Ankrd13b	ENSMUST00000092892	protein_coding	principal2	11	-1	77489678	3336
ENSMUSG00000036208	protein_coding	Nepro	ENSMUST00000048788	protein_coding	principal1	16	1	44724301	2866
ENSMUSG00000102142	sense_intronic	Gm26930	ENSMUST00000194874	sense_intronic		1	1	137932041	1244
ENSMUSG00000031787	protein_coding	Katnb1	ENSMUST00000212895	retained_intron		8	1	95095878	672
ENSMUSG00000031787	protein_coding	Katnb1	ENSMUST00000212565	retained_intron		8	1	95096237	600
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000076968	protein_coding		19	1	10389431	6624
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000148330	nonsense_mediated_decay		1	-1	58424066	1705
ENSMUSG00000005045	protein_coding	Chd5	ENSMUST00000124423	processed_transcript		4	1	152372142	6245
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000151338	nonsense_mediated_decay		1	-1	58424066	1538
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000235479	protein_coding	alternative1	19	1	10389477	2000
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000129303	processed_transcript		1	-1	58413825	938
ENSMUSG00000019822	protein_coding	Smpd2	ENSMUST00000126833	retained_intron		10	-1	41490330	4150
ENSMUSG00000032128	protein_coding	Robo3	ENSMUST00000167089	retained_intron		9	-1	37418864	2226
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000235568	processed_transcript		19	1	10389483	236
ENSMUSG00000024875	protein_coding	Yif1a	ENSMUST00000025811	protein_coding	principal1	19	1	5088545	1488
ENSMUSG00000019822	protein_coding	Smpd2	ENSMUST00000143470	retained_intron		10	-1	41490121	2749
ENSMUSG00000036208	protein_coding	Nepro	ENSMUST00000123673	nonsense_mediated_decay		16	1	44724357	435
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000186552	retained_intron		1	-1	58420398	724
ENSMUSG00000024875	protein_coding	Yif1a	ENSMUST00000235773	retained_intron		19	1	5088555	714
ENSMUSG00000024875	protein_coding	Yif1a	ENSMUST00000237025	protein_coding		19	1	5088560	941
ENSMUSG00000036208	protein_coding	Nepro	ENSMUST00000147804	nonsense_mediated_decay		16	1	44724357	1956
ENSMUSG00000037553	protein_coding	Zdhhc18	ENSMUST00000084238	protein_coding	principal1	4	-1	133633469	4580
ENSMUSG00000005045	protein_coding	Chd5	ENSMUST00000030775	protein_coding	principal3	4	1	152338651	9486
ENSMUSG00000024875	protein_coding	Yif1a	ENSMUST00000236687	protein_coding		19	1	5088928	1178
ENSMUSG00000005045	protein_coding	Chd5	ENSMUST00000164662	protein_coding	alternative2	4	1	152338651	9375
ENSMUSG00000090750	unprocessed_pseudogene	Gm21999	ENSMUST00000165985	unprocessed_pseudogene		5	1	17380573	387
ENSMUSG00000060961	protein_coding	Slc4a4	ENSMUST00000148750	protein_coding	principal1	5	1	88886818	7931
ENSMUSG00000036208	protein_coding	Nepro	ENSMUST00000130805	retained_intron		16	1	44726167	3743
ENSMUSG00000080997	processed_pseudogene	Gm11885	ENSMUST00000118473	processed_pseudogene		4	-1	22008189	1428
ENSMUSG00000032128	protein_coding	Robo3	ENSMUST00000171467	retained_intron		9	-1	37422603	3222
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000135380	retained_intron		1	-1	58421258	684
ENSMUSG00000020189	protein_coding	Osbpl8	ENSMUST00000105275	protein_coding	alternative1	10	1	111164752	7204
ENSMUSG00000082490	processed_pseudogene	Gm11880	ENSMUST00000117612	processed_pseudogene		4	-1	22117532	399
ENSMUSG00000085179	processed_transcript	Gm13645	ENSMUST00000145163	processed_transcript		4	-1	152353641	699
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000129577	retained_intron		1	-1	58424066	3191
ENSMUSG00000036208	protein_coding	Nepro	ENSMUST00000132610	nonsense_mediated_decay		16	1	44727119	602
ENSMUSG00000083376	processed_pseudogene	Gm11882	ENSMUST00000121463	processed_pseudogene		4	1	22275833	506
ENSMUSG00000060961	protein_coding	Slc4a4	ENSMUST00000135283	processed_transcript		5	1	88887261	489
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000131051	retained_intron		1	-1	58417426	430
ENSMUSG00000026034	protein_coding	Clk1	ENSMUST00000147258	retained_intron		1	-1	58424066	456
ENSMUSG00000060961	protein_coding	Slc4a4	ENSMUST00000113218	protein_coding		5	1	88887297	3269
ENSMUSG00000037553	protein_coding	Zdhhc18	ENSMUST00000135999	retained_intron		4	-1	133615567	896
ENSMUSG00000037553	protein_coding	Zdhhc18	ENSMUST00000142382	processed_transcript		4	-1	133613034	260
ENSMUSG00000037553	protein_coding	Zdhhc18	ENSMUST00000138639	retained_intron		4	-1	133615342	673
ENSMUSG00000037553	protein_coding	Zdhhc18	ENSMUST00000146464	processed_transcript		4	-1	133650154	316
ENSMUSG00000020189	protein_coding	Osbpl8	ENSMUST00000220139	retained_intron		10	1	111164802	2460
ENSMUSG00000005649	protein_coding	Cabp5	ENSMUST00000005791	protein_coding	principal1	7	1	13398132	1777
ENSMUSG00000060961	protein_coding	Slc4a4	ENSMUST00000156238	protein_coding		5	1	88887299	3494
ENSMUSG00000005649	protein_coding	Cabp5	ENSMUST00000117400	protein_coding		7	1	13398295	1258
ENSMUSG00000020189	protein_coding	Osbpl8	ENSMUST00000095310	protein_coding	principal3	10	1	111164802	3622
ENSMUSG00000041930	protein_coding	Fam222a	ENSMUST00000043650	protein_coding	principal1	5	1	114568016	2930
ENSMUSG00000019822	protein_coding	Smpd2	ENSMUST00000019965	protein_coding	principal1	10	-1	41490340	1602
ENSMUSG00000060961	protein_coding	Slc4a4	ENSMUST00000144713	protein_coding		5	1	88934532	371
ENSMUSG00000005649	protein_coding	Cabp5	ENSMUST00000152995	nonsense_mediated_decay		7	1	13398308	465
ENSMUSG00000060961	protein_coding	Slc4a4	ENSMUST00000238265	protein_coding		5	1	88934572	587
ENSMUSG00000058643	protein_coding	Speer4f1	ENSMUST00000076099	protein_coding	principal1	5	1	17476098	1256
ENSMUSG00000041930	protein_coding	Fam222a	ENSMUST00000130983	processed_transcript		5	1	114568017	746
ENSMUSG00000020189	protein_coding	Osbpl8	ENSMUST00000217693	processed_transcript		10	1	111233629	624
ENSMUSG00000020189	protein_coding	Osbpl8	ENSMUST00000238838	protein_coding		10	1	111248068	2523
ENSMUSG00000022262	protein_coding	Dnah5	ENSMUST00000067048	protein_coding	principal1	15	1	28203752	15637
ENSMUSG00000060961	protein_coding	Slc4a4	ENSMUST00000130041	protein_coding		5	1	89027966	3335
ENSMUSG00000084160	processed_pseudogene	Gm13345	ENSMUST00000121928	processed_pseudogene		2	-1	19509317	228
ENSMUSG00000019822	protein_coding	Smpd2	ENSMUST00000141542	retained_intron		10	-1	41490330	2365
ENSMUSG00000060961	protein_coding	Slc4a4	ENSMUST00000113216	protein_coding		5	1	89028077	2518
ENSMUSG00000019822	protein_coding	Smpd2	ENSMUST00000122997	retained_intron		10	-1	41488245	441
ENSMUSG00000060961	protein_coding	Slc4a4	ENSMUST00000134303	protein_coding		5	1	89028092	780
ENSMUSG00000112221	processed_pseudogene	Gm47142	ENSMUST00000219679	processed_pseudogene		10	-1	102683315	247
ENSMUSG00000112845	lincRNA	Gm47143	ENSMUST00000218188	lincRNA		10	1	102683265	481
ENSMUSG00000100496	lincRNA	Gm28639	ENSMUST00000191519	lincRNA		2	1	51219382	481
ENSMUSG00000112845	lincRNA	Gm47143	ENSMUST00000220405	lincRNA		10	1	102683270	842
ENSMUSG00000081173	processed_pseudogene	Gm13500	ENSMUST00000119348	processed_pseudogene		2	1	51231987	824
ENSMUSG00000112845	lincRNA	Gm47143	ENSMUST00000218083	lincRNA		10	1	102683270	661
ENSMUSG00000019822	protein_coding	Smpd2	ENSMUST00000155411	nonsense_mediated_decay		10	-1	41490097	936
ENSMUSG00000112046	transcribed_processed_pseudogene	Gm5175	ENSMUST00000218458	processed_transcript		10	1	102819320	1703
ENSMUSG00000112046	transcribed_processed_pseudogene	Gm5175	ENSMUST00000219699	transcribed_processed_pseudogene		10	1	102819371	529
ENSMUSG00000002580	protein_coding	Mien1	ENSMUST00000002655	protein_coding	principal1	11	-1	98438991	747
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000074157	protein_coding	principal2	18	1	74442537	6745
ENSMUSG00000023932	protein_coding	Cdc5l	ENSMUST00000024727	protein_coding	principal1	17	-1	45433737	3027
ENSMUSG00000031494	protein_coding	Cd209a	ENSMUST00000012847	protein_coding	principal2	8	-1	3748984	1482
ENSMUSG00000086349	lincRNA	Gm13497	ENSMUST00000139497	lincRNA		2	1	51241831	2038
ENSMUSG00000019822	protein_coding	Smpd2	ENSMUST00000147367	retained_intron		10	-1	41489679	828
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000077946	protein_coding	principal3	1	-1	80758448	7198
ENSMUSG00000031494	protein_coding	Cd209a	ENSMUST00000208960	protein_coding	alternative2	8	-1	3748927	844
ENSMUSG00000086523	lincRNA	Gm13499	ENSMUST00000142804	lincRNA		2	-1	51365499	603
ENSMUSG00000030125	protein_coding	Lrrc23	ENSMUST00000112475	protein_coding	principal1	6	-1	124779727	1444
ENSMUSG00000023932	protein_coding	Cdc5l	ENSMUST00000232900	processed_transcript		17	-1	45415684	764
ENSMUSG00000031494	protein_coding	Cd209a	ENSMUST00000207979	protein_coding	alternative2	8	-1	3748930	802
ENSMUSG00000019822	protein_coding	Smpd2	ENSMUST00000132170	retained_intron		10	-1	41490338	871
ENSMUSG00000023932	protein_coding	Cdc5l	ENSMUST00000232910	retained_intron		17	-1	45433541	418
ENSMUSG00000019822	protein_coding	Smpd2	ENSMUST00000147738	retained_intron		10	-1	41490369	819
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000190595	protein_coding		1	-1	80592832	6025
ENSMUSG00000026251	protein_coding	Chrnd	ENSMUST00000189970	retained_intron		1	1	87190607	538
ENSMUSG00000030125	protein_coding	Lrrc23	ENSMUST00000132492	retained_intron		6	-1	124774610	536
ENSMUSG00000020747	protein_coding	Tmem94	ENSMUST00000093912	protein_coding	principal2	11	1	115765433	5329
ENSMUSG00000086007	lincRNA	1700057H21Rik	ENSMUST00000154530	lincRNA		2	-1	51437900	506
ENSMUSG00000097119	bidirectional_promoter_lncRNA	B230354K17Rik	ENSMUST00000233097	bidirectional_promoter_lncRNA		17	1	45433598	437
ENSMUSG00000031494	protein_coding	Cd209a	ENSMUST00000207906	retained_intron		8	-1	3748930	890
ENSMUSG00000097119	bidirectional_promoter_lncRNA	B230354K17Rik	ENSMUST00000233940	bidirectional_promoter_lncRNA		17	1	45433831	2971
ENSMUSG00000086007	lincRNA	1700057H21Rik	ENSMUST00000152467	lincRNA		2	-1	51438785	383
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000223586	protein_coding	principal4	19	1	10389483	1344
ENSMUSG00000097119	bidirectional_promoter_lncRNA	B230354K17Rik	ENSMUST00000181149	bidirectional_promoter_lncRNA		17	1	45433852	4897
ENSMUSG00000097119	bidirectional_promoter_lncRNA	B230354K17Rik	ENSMUST00000233673	bidirectional_promoter_lncRNA		17	1	45433865	2578
ENSMUSG00000068394	protein_coding	Cep152	ENSMUST00000089776	protein_coding	principal1	2	-1	125625113	5768
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000187774	protein_coding	alternative2	1	-1	80665309	6796
ENSMUSG00000020747	protein_coding	Tmem94	ENSMUST00000136720	protein_coding		11	1	115765442	373
ENSMUSG00000084334	processed_pseudogene	Gm13494	ENSMUST00000120828	processed_pseudogene		2	1	51544975	1096
ENSMUSG00000030347	protein_coding	D6Wsu163e	ENSMUST00000032497	protein_coding	principal1	6	1	126939966	2501
ENSMUSG00000061242	processed_pseudogene	Gm9104	ENSMUST00000095268	processed_pseudogene		17	1	45465788	483
ENSMUSG00000020747	protein_coding	Tmem94	ENSMUST00000103034	protein_coding		11	1	115765443	448
ENSMUSG00000020747	protein_coding	Tmem94	ENSMUST00000141871	protein_coding		11	1	115765454	376
ENSMUSG00000030125	protein_coding	Lrrc23	ENSMUST00000128697	protein_coding		6	-1	124779717	426
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000189486	protein_coding		1	-1	80530165	3639
ENSMUSG00000092574	transcribed_unprocessed_pseudogene	2810047C21Rik1	ENSMUST00000210322	processed_transcript		7	-1	8093041	1179
ENSMUSG00000030347	protein_coding	D6Wsu163e	ENSMUST00000201603	retained_intron		6	1	126939971	420
ENSMUSG00000030125	protein_coding	Lrrc23	ENSMUST00000147669	protein_coding		6	-1	124779704	372
ENSMUSG00000092574	transcribed_unprocessed_pseudogene	2810047C21Rik1	ENSMUST00000172930	transcribed_unprocessed_pseudogene		7	-1	8092838	915
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000120161	processed_transcript		18	1	74442605	3400
ENSMUSG00000020747	protein_coding	Tmem94	ENSMUST00000134948	processed_transcript		11	1	115766721	297
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000190983	protein_coding	alternative2	1	-1	80665275	6672
ENSMUSG00000106358	processed_pseudogene	Gm7047	ENSMUST00000196224	processed_pseudogene		5	1	17493223	1063
ENSMUSG00000023935	protein_coding	Spats1	ENSMUST00000233323	processed_transcript		17	-1	45475415	1744
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000121875	protein_coding	alternative2	18	1	74442607	6065
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000186835	retained_intron		1	-1	80506310	3420
ENSMUSG00000030347	protein_coding	D6Wsu163e	ENSMUST00000201113	retained_intron		6	1	126939975	1458
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000187885	retained_intron		1	-1	80522396	1899
ENSMUSG00000030125	protein_coding	Lrrc23	ENSMUST00000032218	protein_coding	principal1	6	-1	124779718	1470
ENSMUSG00000020747	protein_coding	Tmem94	ENSMUST00000103033	protein_coding	principal2	11	1	115775756	5238
ENSMUSG00000030347	protein_coding	D6Wsu163e	ENSMUST00000201617	protein_coding		6	1	126940029	550
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000125751	processed_transcript		18	1	74633177	383
ENSMUSG00000003527	protein_coding	Ess2	ENSMUST00000232423	protein_coding	alternative2	16	-1	17911315	2785
ENSMUSG00000062235	processed_pseudogene	Gm5341	ENSMUST00000058881	processed_pseudogene		7	-1	90107968	489
ENSMUSG00000020747	protein_coding	Tmem94	ENSMUST00000239299	protein_coding	alternative2	11	1	115780699	5014
ENSMUSG00000030347	protein_coding	D6Wsu163e	ENSMUST00000202964	retained_intron		6	1	126950340	477
ENSMUSG00000030347	protein_coding	D6Wsu163e	ENSMUST00000201520	retained_intron		6	1	126974420	639
ENSMUSG00000020747	protein_coding	Tmem94	ENSMUST00000125918	protein_coding		11	1	115788954	898
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000140904	processed_transcript		18	1	74707506	764
ENSMUSG00000097162	bidirectional_promoter_lncRNA	2310010J17Rik	ENSMUST00000181189	bidirectional_promoter_lncRNA		7	-1	90129477	490
ENSMUSG00000025020	protein_coding	Slit1	ENSMUST00000169141	protein_coding		19	-1	41743492	5673
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000177366	protein_coding		18	1	74713619	382
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000191505	retained_intron		1	-1	80758527	3472
ENSMUSG00000003527	protein_coding	Ess2	ENSMUST00000003621	protein_coding	principal2	16	-1	17911348	2821
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000122914	retained_intron		18	1	74714789	388
ENSMUSG00000027925	protein_coding	Sprr2j-ps	ENSMUST00000029533	protein_coding	principal1	3	1	92418082	678
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000186087	protein_coding		1	-1	80709496	1688
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000146253	processed_transcript		18	1	74715578	470
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000191449	protein_coding		1	-1	80665292	1384
ENSMUSG00000116256	lincRNA	Gm32405	ENSMUST00000230277	lincRNA		15	-1	74000913	2044
ENSMUSG00000097162	bidirectional_promoter_lncRNA	2310010J17Rik	ENSMUST00000209166	bidirectional_promoter_lncRNA		7	-1	90129940	271
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000235784	protein_coding		19	1	10389483	1932
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000224135	protein_coding	alternative2	19	1	10389483	1704
ENSMUSG00000003527	protein_coding	Ess2	ENSMUST00000232366	retained_intron		16	-1	17905685	800
ENSMUSG00000097162	bidirectional_promoter_lncRNA	2310010J17Rik	ENSMUST00000209164	bidirectional_promoter_lncRNA		7	-1	90129984	432
ENSMUSG00000038608	protein_coding	Dock10	ENSMUST00000187698	retained_intron		1	-1	80758487	2789
ENSMUSG00000031715	protein_coding	Smarca5	ENSMUST00000043359	protein_coding	principal1	8	-1	80739497	6113
ENSMUSG00000076612	IG_C_gene	Ighg2c	ENSMUST00000103416	IG_C_gene	principal5	12	-1	113288932	1214
ENSMUSG00000003527	protein_coding	Ess2	ENSMUST00000232111	retained_intron		16	-1	17907548	653
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176381	protein_coding	principal1	19	1	8741413	2251
ENSMUSG00000103192	TEC	Gm37645	ENSMUST00000194285	TEC		1	-1	80669564	3556
ENSMUSG00000076612	IG_C_gene	Ighg2c	ENSMUST00000195192	IG_C_gene	alternative2	12	-1	113288932	1111
ENSMUSG00000010342	protein_coding	Tex14	ENSMUST00000060835	protein_coding	principal1	11	1	87405065	4763
ENSMUSG00000102721	TEC	A630081D01Rik	ENSMUST00000195842	TEC		1	-1	80749054	1833
ENSMUSG00000003527	protein_coding	Ess2	ENSMUST00000231921	retained_intron		16	-1	17907658	914
ENSMUSG00000052364	protein_coding	B630019K06Rik	ENSMUST00000064196	protein_coding	principal1	X	1	8892382	2583
ENSMUSG00000106898	processed_pseudogene	Gm43125	ENSMUST00000201724	processed_pseudogene		6	-1	126985325	730
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000237745	nonsense_mediated_decay		19	1	10389483	1959
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000175642	retained_intron		19	1	8741470	523
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000235303	nonsense_mediated_decay		19	1	10389483	2187
ENSMUSG00000025885	protein_coding	Myo5b	ENSMUST00000154986	retained_intron		18	1	74733765	2500
ENSMUSG00000025020	protein_coding	Slit1	ENSMUST00000025993	protein_coding	principal1	19	-1	41743665	5045
ENSMUSG00000010342	protein_coding	Tex14	ENSMUST00000156483	protein_coding		11	1	87427591	444
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000225452	protein_coding		19	1	10389483	1572
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000177373	protein_coding		19	1	8741479	995
ENSMUSG00000075273	protein_coding	Ttc30b	ENSMUST00000099996	protein_coding	principal1	2	-1	75938585	2737
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000237366	protein_coding		19	1	10389483	1563
ENSMUSG00000026734	protein_coding	4921504E06Rik	ENSMUST00000062060	protein_coding	principal1	2	-1	19553914	2008
ENSMUSG00000107002	protein_coding	0610012G03Rik	ENSMUST00000202722	protein_coding	principal1	16	-1	31948494	1445
ENSMUSG00000010342	protein_coding	Tex14	ENSMUST00000131973	protein_coding		11	1	87536724	601
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000175872	nonsense_mediated_decay		19	1	8741488	1720
ENSMUSG00000024743	protein_coding	Syt7	ENSMUST00000235717	processed_transcript		19	1	10404018	393
ENSMUSG00000025020	protein_coding	Slit1	ENSMUST00000166496	protein_coding		19	-1	41743492	4556
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000010254	protein_coding		19	1	8741489	1780
ENSMUSG00000086333	antisense	1700120E14Rik	ENSMUST00000152951	antisense		18	-1	74531124	799
ENSMUSG00000118310	TEC	Gm50268	ENSMUST00000238123	TEC		19	1	10439897	2756
ENSMUSG00000010342	protein_coding	Tex14	ENSMUST00000100657	protein_coding		11	1	87539004	455
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176093	retained_intron		19	1	8741512	3015
ENSMUSG00000086333	antisense	1700120E14Rik	ENSMUST00000137034	antisense		18	-1	74531106	732
ENSMUSG00000026734	protein_coding	4921504E06Rik	ENSMUST00000131199	retained_intron		2	-1	19553914	1516
ENSMUSG00000025020	protein_coding	Slit1	ENSMUST00000169416	retained_intron		19	-1	41608530	516
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176314	protein_coding		19	1	8741669	378
ENSMUSG00000101346	unprocessed_pseudogene	Gm29505	ENSMUST00000188424	unprocessed_pseudogene		Y	-1	85919263	615
ENSMUSG00000023935	protein_coding	Spats1	ENSMUST00000233769	protein_coding		17	-1	45474864	975
ENSMUSG00000025020	protein_coding	Slit1	ENSMUST00000171586	protein_coding		19	-1	41743486	1220
ENSMUSG00000031715	protein_coding	Smarca5	ENSMUST00000122807	retained_intron		8	-1	80739425	3292
ENSMUSG00000010342	protein_coding	Tex14	ENSMUST00000124255	processed_transcript		11	1	87543158	658
ENSMUSG00000083894	processed_pseudogene	Gm11489	ENSMUST00000118342	processed_pseudogene		11	1	87467679	499
ENSMUSG00000112347	bidirectional_promoter_lncRNA	Gm47257	ENSMUST00000218594	bidirectional_promoter_lncRNA		10	1	62602350	1779
ENSMUSG00000101230	unprocessed_pseudogene	Gm21862	ENSMUST00000186957	unprocessed_pseudogene		Y	-1	85956247	696
ENSMUSG00000031715	protein_coding	Smarca5	ENSMUST00000142470	retained_intron		8	-1	80711698	503
ENSMUSG00000100471	processed_pseudogene	Gm28409	ENSMUST00000187064	processed_pseudogene		7	1	32931925	103
ENSMUSG00000023935	protein_coding	Spats1	ENSMUST00000233553	protein_coding	alternative2	17	-1	45474826	997
ENSMUSG00000031715	protein_coding	Smarca5	ENSMUST00000150277	retained_intron		8	-1	80710861	334
ENSMUSG00000102061	lincRNA	Gm28823	ENSMUST00000188540	lincRNA		Y	-1	85965480	2167
ENSMUSG00000106981	lincRNA	Gm45495	ENSMUST00000200940	lincRNA		5	1	53281810	1700
ENSMUSG00000045973	protein_coding	Slc25a51	ENSMUST00000107796	protein_coding		4	-1	45408761	4433
ENSMUSG00000031715	protein_coding	Smarca5	ENSMUST00000140110	retained_intron		8	-1	80717579	701
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000073430	protein_coding	principal1	19	1	8741803	2112
ENSMUSG00000045973	protein_coding	Slc25a51	ENSMUST00000132815	protein_coding	principal1	4	-1	45408760	1005
ENSMUSG00000101296	unprocessed_pseudogene	Scgb2b32-ps	ENSMUST00000190326	unprocessed_pseudogene		7	-1	32973961	337
ENSMUSG00000031715	protein_coding	Smarca5	ENSMUST00000148455	retained_intron		8	-1	80726392	722
ENSMUSG00000023935	protein_coding	Spats1	ENSMUST00000024731	protein_coding	principal2	17	-1	45474938	1160
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000201452	protein_coding	principal3	5	-1	149636171	3140
ENSMUSG00000045973	protein_coding	Slc25a51	ENSMUST00000153904	protein_coding		4	-1	45408646	777
ENSMUSG00000106808	lincRNA	Gm42745	ENSMUST00000200904	lincRNA		5	-1	53371774	193
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000175901	protein_coding		19	1	8741807	1153
ENSMUSG00000031066	protein_coding	Usp11	ENSMUST00000033383	protein_coding	principal1	X	1	20703906	3467
ENSMUSG00000045973	protein_coding	Slc25a51	ENSMUST00000151516	protein_coding		4	-1	45404866	718
ENSMUSG00000109556	lincRNA	Gm38843	ENSMUST00000209189	lincRNA		6	-1	82805083	323
ENSMUSG00000023935	protein_coding	Spats1	ENSMUST00000233583	retained_intron		17	-1	45474879	2685
ENSMUSG00000028249	protein_coding	Sdcbp	ENSMUST00000029912	protein_coding	alternative2	4	1	6365650	2745
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176013	nonsense_mediated_decay		19	1	8741888	2106
ENSMUSG00000045973	protein_coding	Slc25a51	ENSMUST00000134714	processed_transcript		4	-1	45408735	1022
ENSMUSG00000030492	protein_coding	Slc7a9	ENSMUST00000118383	protein_coding	principal1	7	1	35448796	1869
ENSMUSG00000031903	protein_coding	Pla2g15	ENSMUST00000212963	protein_coding		8	1	106150399	2578
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176260	retained_intron		19	1	8742144	1025
ENSMUSG00000045973	protein_coding	Slc25a51	ENSMUST00000116341	protein_coding	principal1	4	-1	45408766	4438
ENSMUSG00000020614	protein_coding	Fam20a	ENSMUST00000155559	nonsense_mediated_decay		11	-1	109722279	3085
ENSMUSG00000026251	protein_coding	Chrnd	ENSMUST00000073252	protein_coding	principal1	1	1	87190637	2925
ENSMUSG00000081145	processed_pseudogene	Gm14585	ENSMUST00000120713	processed_pseudogene		X	1	53314533	634
ENSMUSG00000113833	TEC	Gm48264	ENSMUST00000221361	TEC		12	1	35746229	2019
ENSMUSG00000030492	protein_coding	Slc7a9	ENSMUST00000118969	protein_coding	principal1	7	1	35449037	1765
ENSMUSG00000031903	protein_coding	Pla2g15	ENSMUST00000034377	protein_coding	principal1	8	1	106150399	2706
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176009	retained_intron		19	1	8742860	774
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176182	retained_intron		19	1	8748503	670
ENSMUSG00000076463	TR_V_gene	Trbv3	ENSMUST00000103264	TR_V_gene	principal1	6	1	41048290	455
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000202361	protein_coding	principal3	5	-1	149636338	3802
ENSMUSG00000031903	protein_coding	Pla2g15	ENSMUST00000212116	retained_intron		8	1	106150506	637
ENSMUSG00000026251	protein_coding	Chrnd	ENSMUST00000186373	protein_coding		1	1	87190844	2949
ENSMUSG00000030492	protein_coding	Slc7a9	ENSMUST00000141905	retained_intron		7	1	35449098	370
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176844	retained_intron		19	1	8748518	419
ENSMUSG00000116532	processed_pseudogene	Gm5232	ENSMUST00000232178	processed_pseudogene		17	1	17500343	602
ENSMUSG00000020614	protein_coding	Fam20a	ENSMUST00000020938	protein_coding	principal1	11	-1	109722256	2541
ENSMUSG00000110731	lincRNA	Gm47049	ENSMUST00000214163	lincRNA		10	1	36391592	675
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176404	retained_intron		19	1	8748533	584
ENSMUSG00000114058	processed_pseudogene	Gm46317	ENSMUST00000221103	processed_pseudogene		12	-1	35761777	393
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000074846	protein_coding	alternative1	5	-1	149636209	3240
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000175834	retained_intron		19	1	8748590	789
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000202089	protein_coding		5	-1	149636338	3054
ENSMUSG00000031903	protein_coding	Pla2g15	ENSMUST00000212059	processed_transcript		8	1	106158503	556
ENSMUSG00000020614	protein_coding	Fam20a	ENSMUST00000146408	retained_intron		11	-1	109676422	828
ENSMUSG00000114122	processed_pseudogene	Gm48712	ENSMUST00000223434	processed_pseudogene		13	-1	95421676	460
ENSMUSG00000030492	protein_coding	Slc7a9	ENSMUST00000147026	retained_intron		7	1	35449100	2086
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176968	protein_coding		19	1	8749003	1049
ENSMUSG00000031066	protein_coding	Usp11	ENSMUST00000127294	processed_transcript		X	1	20703934	801
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000201877	retained_intron		5	-1	149619173	751
ENSMUSG00000010110	protein_coding	Stx5a	ENSMUST00000176570	protein_coding		19	1	8749399	563
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000202137	retained_intron		5	-1	149621187	752
ENSMUSG00000020614	protein_coding	Fam20a	ENSMUST00000144972	retained_intron		11	-1	109682979	794
ENSMUSG00000030492	protein_coding	Slc7a9	ENSMUST00000032703	protein_coding	principal1	7	1	35449170	1940
ENSMUSG00000026851	protein_coding	BC005624	ENSMUST00000028205	protein_coding	principal1	2	-1	30981941	1984
ENSMUSG00000030492	protein_coding	Slc7a9	ENSMUST00000141245	nonsense_mediated_decay		7	1	35449836	536
ENSMUSG00000026851	protein_coding	BC005624	ENSMUST00000152007	retained_intron		2	-1	30980506	854
ENSMUSG00000028249	protein_coding	Sdcbp	ENSMUST00000103008	protein_coding	principal3	4	1	6365677	2086
ENSMUSG00000035041	protein_coding	Creb3l3	ENSMUST00000117422	protein_coding	principal1	10	-1	81098874	2294
ENSMUSG00000028249	protein_coding	Sdcbp	ENSMUST00000155247	processed_transcript		4	1	6365708	2603
ENSMUSG00000086531	lincRNA	Gm11351	ENSMUST00000139335	lincRNA		13	-1	25966316	583
ENSMUSG00000086531	lincRNA	Gm11351	ENSMUST00000225724	lincRNA		13	-1	25986293	478
ENSMUSG00000035041	protein_coding	Creb3l3	ENSMUST00000127374	retained_intron		10	-1	81092575	744
ENSMUSG00000026851	protein_coding	BC005624	ENSMUST00000156325	retained_intron		2	-1	30982201	1064
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000201431	retained_intron		5	-1	149636338	4764
ENSMUSG00000028249	protein_coding	Sdcbp	ENSMUST00000175769	protein_coding		4	1	6365709	975
ENSMUSG00000084358	processed_pseudogene	Gm11352	ENSMUST00000119264	processed_pseudogene		13	1	26194701	517
ENSMUSG00000035041	protein_coding	Creb3l3	ENSMUST00000143969	retained_intron		10	-1	81091906	922
ENSMUSG00000074449	protein_coding	Gm15319	ENSMUST00000084046	protein_coding	principal1	8	-1	20363210	2522
ENSMUSG00000101486	processed_pseudogene	Gm4405	ENSMUST00000106038	processed_pseudogene		7	1	33018397	982
ENSMUSG00000035041	protein_coding	Creb3l3	ENSMUST00000125907	processed_transcript		10	-1	81098754	275
ENSMUSG00000101375	processed_pseudogene	Gm28383	ENSMUST00000187563	processed_pseudogene		7	-1	33033175	139
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000201559	protein_coding		5	-1	149636376	661
ENSMUSG00000028249	protein_coding	Sdcbp	ENSMUST00000108371	processed_transcript		4	1	6365712	369
ENSMUSG00000107389	processed_pseudogene	Gm43124	ENSMUST00000201878	processed_pseudogene		6	1	126990596	278
ENSMUSG00000031066	protein_coding	Usp11	ENSMUST00000137101	retained_intron		X	1	20703960	2967
ENSMUSG00000029467	protein_coding	Atp2a2	ENSMUST00000179939	nonsense_mediated_decay		5	-1	122502174	5674
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000200805	protein_coding		5	-1	149636290	587
ENSMUSG00000084811	lincRNA	1700092E19Rik	ENSMUST00000154703	lincRNA		13	-1	26312406	1650
ENSMUSG00000051367	protein_coding	Six1	ENSMUST00000176310	processed_transcript		12	-1	73042815	885
ENSMUSG00000071793	transcribed_unprocessed_pseudogene	2610005L07Rik	ENSMUST00000140111	processed_transcript		8	-1	20424814	4009
ENSMUSG00000084811	lincRNA	1700092E19Rik	ENSMUST00000123438	lincRNA		13	-1	26312347	583
ENSMUSG00000028249	protein_coding	Sdcbp	ENSMUST00000140830	protein_coding		4	1	6365713	506
ENSMUSG00000071793	transcribed_unprocessed_pseudogene	2610005L07Rik	ENSMUST00000139264	transcribed_unprocessed_pseudogene		8	-1	20410565	948
ENSMUSG00000028249	protein_coding	Sdcbp	ENSMUST00000108374	protein_coding		4	1	6365713	1803
ENSMUSG00000110637	processed_pseudogene	Gm7807	ENSMUST00000212475	processed_pseudogene		8	1	20381081	578
ENSMUSG00000100593	antisense	1700119H24Rik	ENSMUST00000187558	antisense		16	-1	34939329	588
ENSMUSG00000114660	TEC	Gm47881	ENSMUST00000223914	TEC		13	-1	26360026	1073
ENSMUSG00000029467	protein_coding	Atp2a2	ENSMUST00000177974	protein_coding	alternative1	5	-1	122501895	3984
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000200825	protein_coding		5	-1	149636351	416
ENSMUSG00000028249	protein_coding	Sdcbp	ENSMUST00000153861	protein_coding		4	1	6376841	697
ENSMUSG00000029657	protein_coding	Hsph1	ENSMUST00000201666	processed_transcript		5	-1	149633887	254
ENSMUSG00000071796	transcribed_unprocessed_pseudogene	6820431F20Rik	ENSMUST00000150051	transcribed_unprocessed_pseudogene		8	-1	20283266	936
ENSMUSG00000060198	processed_pseudogene	Gm11353	ENSMUST00000180940	processed_pseudogene		13	1	26492554	627
ENSMUSG00000031066	protein_coding	Usp11	ENSMUST00000149960	retained_intron		X	1	20711825	3976
ENSMUSG00000071796	transcribed_unprocessed_pseudogene	6820431F20Rik	ENSMUST00000153748	processed_transcript		8	-1	20297432	4659
ENSMUSG00000061126	protein_coding	Cyp4f39	ENSMUST00000237491	protein_coding	principal1	17	1	32452723	2618
ENSMUSG00000037548	protein_coding	H2-DMb2	ENSMUST00000236519	protein_coding		17	1	34143307	1414
ENSMUSG00000076613	IG_C_gene	Ighg2b	ENSMUST00000192188	IG_C_gene	principal5	12	-1	113307933	2566
ENSMUSG00000061126	protein_coding	Cyp4f39	ENSMUST00000236307	protein_coding		17	1	32452752	363
ENSMUSG00000076613	IG_C_gene	Ighg2b	ENSMUST00000103418	IG_C_gene	alternative2	12	-1	113307933	1114
ENSMUSG00000051367	protein_coding	Six1	ENSMUST00000050029	protein_coding	principal1	12	-1	73047179	3316
ENSMUSG00000036013	protein_coding	Fam122c	ENSMUST00000114835	protein_coding	principal1	X	1	53273424	745
ENSMUSG00000029467	protein_coding	Atp2a2	ENSMUST00000031423	protein_coding	principal4	5	-1	122502225	4486
ENSMUSG00000039629	protein_coding	Strip2	ENSMUST00000151738	protein_coding		6	1	29917012	5281
ENSMUSG00000107486	TR_V_gene	Trbv4	ENSMUST00000103265	TR_V_gene	principal1	6	1	41059394	393
ENSMUSG00000061126	protein_coding	Cyp4f39	ENSMUST00000236005	processed_transcript		17	1	32478251	615
ENSMUSG00000051367	protein_coding	Six1	ENSMUST00000176091	processed_transcript		12	-1	73053887	528
ENSMUSG00000061126	protein_coding	Cyp4f39	ENSMUST00000235903	retained_intron		17	1	32492158	1117
ENSMUSG00000061126	protein_coding	Cyp4f39	ENSMUST00000003413	protein_coding	principal1	17	1	32468462	1599
ENSMUSG00000051367	protein_coding	Six1	ENSMUST00000175677	processed_transcript		12	-1	73045291	334
ENSMUSG00000036013	protein_coding	Fam122c	ENSMUST00000124137	nonsense_mediated_decay		X	1	53273424	907
ENSMUSG00000035376	protein_coding	Hacd2	ENSMUST00000061156	protein_coding	principal1	16	1	35022428	3598
ENSMUSG00000050526	protein_coding	Mgat4f	ENSMUST00000162187	protein_coding	principal1	1	1	134385940	1768
ENSMUSG00000103586	lincRNA	5830405F06Rik	ENSMUST00000193357	lincRNA		6	1	41055883	844
ENSMUSG00000036013	protein_coding	Fam122c	ENSMUST00000186314	protein_coding	principal1	X	1	53273433	898
ENSMUSG00000103586	lincRNA	5830405F06Rik	ENSMUST00000192753	lincRNA		6	1	41055884	1755
ENSMUSG00000024769	protein_coding	Cdc42bpg	ENSMUST00000025681	protein_coding	principal1	19	1	6306456	5995
ENSMUSG00000035376	protein_coding	Hacd2	ENSMUST00000231516	retained_intron		16	1	35022430	389
ENSMUSG00000076465	TR_V_gene	Trbv5	ENSMUST00000103266	TR_V_gene	principal1	6	1	41062332	368
ENSMUSG00000029467	protein_coding	Atp2a2	ENSMUST00000197415	processed_transcript		5	-1	122501621	615
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000178474	protein_coding	principal1	1	-1	125435547	2565
ENSMUSG00000000183	protein_coding	Fgf6	ENSMUST00000000187	protein_coding	principal1	6	1	127015586	4657
ENSMUSG00000035376	protein_coding	Hacd2	ENSMUST00000231556	processed_transcript		16	1	35048615	421
ENSMUSG00000024769	protein_coding	Cdc42bpg	ENSMUST00000141854	retained_intron		19	1	6321808	310
ENSMUSG00000029467	protein_coding	Atp2a2	ENSMUST00000196490	retained_intron		5	-1	122501617	698
ENSMUSG00000114167	processed_pseudogene	Gm7002	ENSMUST00000221386	processed_pseudogene		12	1	35772951	2165
ENSMUSG00000079906	processed_pseudogene	Gm15846	ENSMUST00000116022	processed_pseudogene		5	-1	122438915	320
ENSMUSG00000113130	processed_pseudogene	Gm47721	ENSMUST00000222716	processed_pseudogene		13	1	20645757	1408
ENSMUSG00000097951	processed_pseudogene	Gm7611	ENSMUST00000182329	processed_pseudogene		13	-1	20705382	1000
ENSMUSG00000114707	TEC	Gm47558	ENSMUST00000224003	TEC		13	-1	114284381	2714
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000186008	retained_intron		1	-1	125397612	978
ENSMUSG00000113168	processed_pseudogene	Gm7614	ENSMUST00000222235	processed_pseudogene		13	1	20748498	328
ENSMUSG00000081908	unprocessed_pseudogene	Olfr1147-ps1	ENSMUST00000122179	unprocessed_pseudogene		2	1	87822639	913
ENSMUSG00000116840	antisense	Gm21691	ENSMUST00000232548	antisense		16	-1	35004701	1853
ENSMUSG00000062312	protein_coding	Erbb2	ENSMUST00000058295	protein_coding	principal1	11	1	98412470	5012
ENSMUSG00000116840	antisense	Gm21691	ENSMUST00000232649	antisense		16	-1	35022900	544
ENSMUSG00000116840	antisense	Gm21691	ENSMUST00000232296	antisense		16	-1	35022900	495
ENSMUSG00000116840	antisense	Gm21691	ENSMUST00000232358	antisense		16	-1	35023205	1372
ENSMUSG00000023456	protein_coding	Tpi1	ENSMUST00000172132	protein_coding	principal1	6	-1	124814296	1607
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000191578	nonsense_mediated_decay		1	-1	125435481	1390
ENSMUSG00000023456	protein_coding	Tpi1	ENSMUST00000154883	retained_intron		6	-1	124814158	1552
ENSMUSG00000038069	protein_coding	Cdkn2aip	ENSMUST00000038738	protein_coding	alternative2	8	-1	47713932	3464
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000188362	retained_intron		1	-1	125398316	1609
ENSMUSG00000061875	protein_coding	Olfr1148	ENSMUST00000215230	protein_coding	principal1	2	1	87830533	3095
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000189192	retained_intron		1	-1	125408941	658
ENSMUSG00000061875	protein_coding	Olfr1148	ENSMUST00000077580	protein_coding	principal1	2	1	87833041	945
ENSMUSG00000022836	protein_coding	Mylk	ENSMUST00000155268	retained_intron		16	1	34745210	3077
ENSMUSG00000023456	protein_coding	Tpi1	ENSMUST00000149610	protein_coding		6	-1	124813070	802
ENSMUSG00000023456	protein_coding	Tpi1	ENSMUST00000133251	retained_intron		6	-1	124811886	486
ENSMUSG00000039629	protein_coding	Strip2	ENSMUST00000137068	retained_intron		6	1	29917013	3098
ENSMUSG00000023456	protein_coding	Tpi1	ENSMUST00000139716	retained_intron		6	-1	124812840	308
ENSMUSG00000023456	protein_coding	Tpi1	ENSMUST00000204602	retained_intron		6	-1	124814154	691
ENSMUSG00000032128	protein_coding	Robo3	ENSMUST00000034643	protein_coding	alternative2	9	-1	37430134	4712
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000188497	protein_coding		1	-1	125435727	856
ENSMUSG00000038069	protein_coding	Cdkn2aip	ENSMUST00000212175	protein_coding	principal2	8	-1	47713931	3393
ENSMUSG00000023456	protein_coding	Tpi1	ENSMUST00000239432	protein_coding		6	-1	124814296	1601
ENSMUSG00000038069	protein_coding	Cdkn2aip	ENSMUST00000212658	retained_intron		8	-1	47713932	842
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000191544	protein_coding		1	-1	125434646	654
ENSMUSG00000111442	TEC	Gm48334	ENSMUST00000214553	TEC		10	-1	30769575	777
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000191004	protein_coding		1	-1	125435454	610
ENSMUSG00000110744	processed_pseudogene	Gm5171	ENSMUST00000214944	processed_pseudogene		10	-1	30782271	1415
ENSMUSG00000097706	antisense	E030037K01Rik	ENSMUST00000180928	antisense		8	1	47713266	1756
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000187460	protein_coding		1	-1	125435707	667
ENSMUSG00000039629	protein_coding	Strip2	ENSMUST00000115224	protein_coding		6	1	29917013	3524
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000185280	protein_coding		1	-1	125435470	435
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000188827	retained_intron		1	-1	125435428	517
ENSMUSG00000039629	protein_coding	Strip2	ENSMUST00000130969	retained_intron		6	1	29917013	3781
ENSMUSG00000108015	lincRNA	Gm32591	ENSMUST00000204063	lincRNA		6	1	82823214	403
ENSMUSG00000032128	protein_coding	Robo3	ENSMUST00000115038	protein_coding	principal2	9	-1	37433246	4797
ENSMUSG00000026341	protein_coding	Actr3	ENSMUST00000027579	protein_coding	principal1	1	-1	125435727	2554
ENSMUSG00000037548	protein_coding	H2-DMb2	ENSMUST00000041982	protein_coding	principal1	17	1	34145236	1424
ENSMUSG00000082308	processed_pseudogene	Gm15770	ENSMUST00000117498	processed_pseudogene		5	-1	142853199	584
ENSMUSG00000032128	protein_coding	Robo3	ENSMUST00000170512	nonsense_mediated_decay		9	-1	37430134	5000
ENSMUSG00000032128	protein_coding	Robo3	ENSMUST00000167216	retained_intron		9	-1	37418791	668
ENSMUSG00000029149	protein_coding	Krtcap3	ENSMUST00000201333	retained_intron		5	1	31251691	1027
ENSMUSG00000108015	lincRNA	Gm32591	ENSMUST00000204725	lincRNA		6	1	82831434	696
ENSMUSG00000037548	protein_coding	H2-DMb2	ENSMUST00000171231	protein_coding		17	1	34145271	1483
ENSMUSG00000038451	protein_coding	Spsb2	ENSMUST00000047760	protein_coding	principal1	6	1	124808661	1213
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000069949	protein_coding		6	-1	51469894	1647
ENSMUSG00000101932	processed_pseudogene	Gm10074	ENSMUST00000174543	processed_pseudogene		17	1	36226023	249
ENSMUSG00000108015	lincRNA	Gm32591	ENSMUST00000208679	lincRNA		6	1	82831434	1806
ENSMUSG00000092428	processed_pseudogene	Gm20545	ENSMUST00000174739	processed_pseudogene		17	-1	36227024	210
ENSMUSG00000075609	processed_pseudogene	Gm7935	ENSMUST00000100555	processed_pseudogene		15	-1	74081511	1278
ENSMUSG00000038451	protein_coding	Spsb2	ENSMUST00000143040	protein_coding		6	1	124808885	882
ENSMUSG00000108015	lincRNA	Gm32591	ENSMUST00000203038	lincRNA		6	1	82831438	414
ENSMUSG00000101756	processed_pseudogene	Gm29402	ENSMUST00000186687	processed_pseudogene		17	1	36228925	40
ENSMUSG00000082585	processed_pseudogene	Gm15387	ENSMUST00000120421	processed_pseudogene		15	-1	74094333	648
ENSMUSG00000101974	processed_pseudogene	Gm28384	ENSMUST00000189079	processed_pseudogene		7	1	33033271	463
ENSMUSG00000092612	processed_pseudogene	Gm18604	ENSMUST00000172535	processed_pseudogene		17	1	36229469	558
ENSMUSG00000062312	protein_coding	Erbb2	ENSMUST00000136032	processed_transcript		11	1	98412493	4431
ENSMUSG00000038451	protein_coding	Spsb2	ENSMUST00000052727	protein_coding	principal1	6	1	124808906	1219
ENSMUSG00000092363	unprocessed_pseudogene	Gm20391	ENSMUST00000174722	unprocessed_pseudogene		17	-1	36237359	106
ENSMUSG00000062312	protein_coding	Erbb2	ENSMUST00000138066	processed_transcript		11	1	98427080	388
ENSMUSG00000082198	processed_pseudogene	Gm14504	ENSMUST00000119391	processed_pseudogene		X	-1	8923982	1497
ENSMUSG00000084835	antisense	Gm12352	ENSMUST00000154452	antisense		11	1	98438037	760
ENSMUSG00000118581	unitary_pseudogene	AC119183.1	ENSMUST00000239328	unitary_pseudogene		15	-1	74440444	795
ENSMUSG00000038451	protein_coding	Spsb2	ENSMUST00000130160	protein_coding		6	1	124808919	776
ENSMUSG00000092317	processed_pseudogene	Gm6633	ENSMUST00000173851	processed_pseudogene		17	-1	36252386	270
ENSMUSG00000031144	protein_coding	Syp	ENSMUST00000069520	protein_coding	principal1	X	1	7638471	2591
ENSMUSG00000092502	processed_pseudogene	Gm4252	ENSMUST00000174823	processed_pseudogene		17	-1	36248948	313
ENSMUSG00000115162	processed_pseudogene	Gm9501	ENSMUST00000227671	processed_pseudogene		15	1	36299624	852
ENSMUSG00000029672	protein_coding	Fam3c	ENSMUST00000165576	protein_coding	principal1	6	-1	22356166	2826
ENSMUSG00000038451	protein_coding	Spsb2	ENSMUST00000112473	protein_coding		6	1	124809298	1322
ENSMUSG00000039629	protein_coding	Strip2	ENSMUST00000046028	protein_coding	principal1	6	1	29917013	5370
ENSMUSG00000098094	protein_coding	Scgb2b17	ENSMUST00000182640	protein_coding	alternative2	7	-1	33056550	420
ENSMUSG00000092392	lincRNA	Gm20546	ENSMUST00000173141	lincRNA		17	1	36248821	1889
ENSMUSG00000068579	processed_pseudogene	Rpl7a-ps3	ENSMUST00000090170	processed_pseudogene		15	-1	36308944	796
ENSMUSG00000081381	processed_pseudogene	Gm5752	ENSMUST00000117771	processed_pseudogene		X	-1	8942183	594
ENSMUSG00000034744	protein_coding	Nagk	ENSMUST00000037376	protein_coding	principal1	6	1	83794982	1405
ENSMUSG00000083871	processed_pseudogene	Gm16479	ENSMUST00000121706	processed_pseudogene		X	1	8956307	932
ENSMUSG00000112753	lincRNA	4930423D24Rik	ENSMUST00000217687	lincRNA		10	1	117177303	382
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000203954	nonsense_mediated_decay		6	-1	51469847	1703
ENSMUSG00000098094	protein_coding	Scgb2b17	ENSMUST00000182673	protein_coding	principal2	7	-1	33056561	434
ENSMUSG00000028825	protein_coding	Rhd	ENSMUST00000030627	protein_coding	principal1	4	1	134864536	1514
ENSMUSG00000022887	protein_coding	Masp1	ENSMUST00000089883	protein_coding	principal1	16	-1	23520815	5345
ENSMUSG00000029672	protein_coding	Fam3c	ENSMUST00000163963	protein_coding		6	-1	22356098	1617
ENSMUSG00000034744	protein_coding	Nagk	ENSMUST00000113851	protein_coding		6	1	83795028	1323
ENSMUSG00000112753	lincRNA	4930423D24Rik	ENSMUST00000219785	lincRNA		10	1	117177632	554
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000204158	nonsense_mediated_decay		6	-1	51469845	1542
ENSMUSG00000098094	protein_coding	Scgb2b17	ENSMUST00000182139	nonsense_mediated_decay		7	-1	33056552	491
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000204885	retained_intron		6	-1	51463184	1554
ENSMUSG00000022887	protein_coding	Masp1	ENSMUST00000229619	protein_coding		16	-1	23520650	3786
ENSMUSG00000028825	protein_coding	Rhd	ENSMUST00000136163	retained_intron		4	1	134879810	701
ENSMUSG00000029672	protein_coding	Fam3c	ENSMUST00000081288	protein_coding		6	-1	22356243	1487
ENSMUSG00000031144	protein_coding	Syp	ENSMUST00000149795	retained_intron		X	1	7638638	2843
ENSMUSG00000022887	protein_coding	Masp1	ENSMUST00000230040	protein_coding		16	-1	23520648	2035
ENSMUSG00000034744	protein_coding	Nagk	ENSMUST00000150322	retained_intron		6	1	83795161	803
ENSMUSG00000031144	protein_coding	Syp	ENSMUST00000128890	protein_coding		X	1	7638722	494
ENSMUSG00000038011	protein_coding	Dnah10	ENSMUST00000141137	protein_coding	alternative2	5	1	124725085	13862
ENSMUSG00000085501	antisense	Gm11772	ENSMUST00000136542	antisense		11	-1	120236122	532
ENSMUSG00000022887	protein_coding	Masp1	ENSMUST00000229152	retained_intron		16	-1	23520596	2093
ENSMUSG00000031144	protein_coding	Syp	ENSMUST00000150572	processed_transcript		X	1	7639305	433
ENSMUSG00000038011	protein_coding	Dnah10	ENSMUST00000198055	processed_transcript		5	1	124786553	431
ENSMUSG00000115759	transcribed_processed_pseudogene	Gm18787	ENSMUST00000226865	transcribed_processed_pseudogene		15	-1	55475563	784
ENSMUSG00000031144	protein_coding	Syp	ENSMUST00000137515	retained_intron		X	1	7639761	430
ENSMUSG00000038011	protein_coding	Dnah10	ENSMUST00000126998	processed_transcript		5	1	124791740	550
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000204188	protein_coding		6	-1	51469772	1518
ENSMUSG00000100291	lincRNA	2310069B03Rik	ENSMUST00000186147	lincRNA		6	-1	82881853	1833
ENSMUSG00000101568	antisense	1700040F17Rik	ENSMUST00000187158	antisense		15	-1	55439020	817
ENSMUSG00000109783	processed_transcript	Gm45338	ENSMUST00000211460	antisense		16	1	23520210	1155
ENSMUSG00000031144	protein_coding	Syp	ENSMUST00000134355	retained_intron		X	1	7643909	417
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000203220	protein_coding	principal2	6	-1	51469772	1638
ENSMUSG00000109783	processed_transcript	Gm45338	ENSMUST00000210658	antisense		16	1	23520261	1105
ENSMUSG00000019791	protein_coding	Hint3	ENSMUST00000161074	protein_coding	principal1	10	-1	30618479	875
ENSMUSG00000109783	processed_transcript	Gm45338	ENSMUST00000209198	antisense		16	1	23520343	820
ENSMUSG00000034744	protein_coding	Nagk	ENSMUST00000146117	processed_transcript		6	1	83795208	1049
ENSMUSG00000029672	protein_coding	Fam3c	ENSMUST00000164669	processed_transcript		6	-1	22329456	805
ENSMUSG00000106969	antisense	Gm42882	ENSMUST00000201788	antisense		5	1	134455990	506
ENSMUSG00000100291	lincRNA	2310069B03Rik	ENSMUST00000186119	lincRNA		6	-1	82881853	1194
ENSMUSG00000109783	processed_transcript	Gm45338	ENSMUST00000210371	antisense		16	1	23520343	1009
ENSMUSG00000034744	protein_coding	Nagk	ENSMUST00000113850	protein_coding		6	1	83795235	1918
ENSMUSG00000109783	processed_transcript	Gm45338	ENSMUST00000211499	antisense		16	1	23520344	1405
ENSMUSG00000029672	protein_coding	Fam3c	ENSMUST00000163371	nonsense_mediated_decay		6	-1	22356073	775
ENSMUSG00000100291	lincRNA	2310069B03Rik	ENSMUST00000191170	lincRNA		6	-1	82881832	324
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000114459	protein_coding	alternative1	6	-1	51469826	1728
ENSMUSG00000087644	antisense	Gm14703	ENSMUST00000145894	antisense		X	-1	7657258	1820
ENSMUSG00000086145	sense_intronic	Gm15479	ENSMUST00000139309	sense_intronic		1	-1	152687501	1133
ENSMUSG00000034744	protein_coding	Nagk	ENSMUST00000205681	retained_intron		6	1	83796242	752
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000204090	retained_intron		6	-1	51464160	766
ENSMUSG00000116627	lincRNA	Gm30124	ENSMUST00000232257	lincRNA		12	1	20990536	1230
ENSMUSG00000029672	protein_coding	Fam3c	ENSMUST00000168965	protein_coding		6	-1	22343913	620
ENSMUSG00000109783	processed_transcript	Gm45338	ENSMUST00000210795	antisense		16	1	23520405	728
ENSMUSG00000109783	processed_transcript	Gm45338	ENSMUST00000210033	retained_intron		16	1	23526879	2951
ENSMUSG00000092229	transcribed_unprocessed_pseudogene	Gm5977	ENSMUST00000174304	transcribed_unprocessed_pseudogene		12	1	21042959	619
ENSMUSG00000096668	unprocessed_pseudogene	Gm3665	ENSMUST00000177214	unprocessed_pseudogene		7	-1	8115821	2461
ENSMUSG00000085734	antisense	Gm11684	ENSMUST00000144975	antisense		11	1	109768486	757
ENSMUSG00000090370	processed_transcript	Gm21989	ENSMUST00000232105	processed_transcript		12	1	20990538	405
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000203253	protein_coding		6	-1	51466701	466
ENSMUSG00000110665	lincRNA	Gm31786	ENSMUST00000212305	lincRNA		8	-1	47749662	564
ENSMUSG00000034744	protein_coding	Nagk	ENSMUST00000151147	retained_intron		6	1	83797032	676
ENSMUSG00000034744	protein_coding	Nagk	ENSMUST00000128262	retained_intron		6	1	83797950	970
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000198866	protein_coding	principal1	5	1	137569840	3072
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000204902	retained_intron		6	-1	51466237	706
ENSMUSG00000042744	protein_coding	Hectd4	ENSMUST00000042614	protein_coding	principal1	5	1	121220219	15482
ENSMUSG00000110665	lincRNA	Gm31786	ENSMUST00000212428	lincRNA		8	-1	47750134	676
ENSMUSG00000034744	protein_coding	Nagk	ENSMUST00000141611	processed_transcript		6	1	83797983	533
ENSMUSG00000034744	protein_coding	Nagk	ENSMUST00000205599	retained_intron		6	1	83802148	1871
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000203655	retained_intron		6	-1	51466667	596
ENSMUSG00000087139	antisense	Gm11683	ENSMUST00000147006	antisense		11	1	109797183	918
ENSMUSG00000053110	protein_coding	Yap1	ENSMUST00000086580	protein_coding	principal3	9	-1	8004588	4115
ENSMUSG00000112913	lincRNA	Gm30853	ENSMUST00000218955	lincRNA		10	-1	65908250	934
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000200190	retained_intron		5	1	137569864	512
ENSMUSG00000042744	protein_coding	Hectd4	ENSMUST00000201669	protein_coding		5	1	121286230	2035
ENSMUSG00000019791	protein_coding	Hint3	ENSMUST00000216617	processed_transcript		10	-1	30629632	687
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000205204	retained_intron		6	-1	51469884	3645
ENSMUSG00000041571	protein_coding	Selenow	ENSMUST00000044355	protein_coding	principal1	7	-1	15922402	736
ENSMUSG00000004980	protein_coding	Hnrnpa2b1	ENSMUST00000090002	protein_coding	principal2	6	-1	51469845	1662
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000199054	protein_coding	principal1	5	1	137569869	2966
ENSMUSG00000112913	lincRNA	Gm30853	ENSMUST00000218367	lincRNA		10	-1	65908239	810
ENSMUSG00000019791	protein_coding	Hint3	ENSMUST00000160646	nonsense_mediated_decay		10	-1	30618333	616
ENSMUSG00000033355	protein_coding	Rtp4	ENSMUST00000209422	protein_coding	principal1	16	1	23520291	1859
ENSMUSG00000113847	lincRNA	Gm48799	ENSMUST00000220739	lincRNA		13	-1	18008344	3661
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000196471	protein_coding	principal1	5	1	137570720	2839
ENSMUSG00000019791	protein_coding	Hint3	ENSMUST00000019925	protein_coding		10	-1	30618337	509
ENSMUSG00000075053	unprocessed_pseudogene	Vdac3-ps1	ENSMUST00000099736	unprocessed_pseudogene		13	-1	18031593	853
ENSMUSG00000052632	protein_coding	Asap2	ENSMUST00000174530	processed_transcript		12	1	20990459	1609
ENSMUSG00000033355	protein_coding	Rtp4	ENSMUST00000211569	protein_coding		16	1	23601742	672
ENSMUSG00000019791	protein_coding	Hint3	ENSMUST00000217266	processed_transcript		10	-1	30614552	2445
ENSMUSG00000033355	protein_coding	Rtp4	ENSMUST00000210901	protein_coding	principal1	16	1	23609057	1158
ENSMUSG00000113496	processed_pseudogene	Gm6575	ENSMUST00000222946	processed_pseudogene		13	1	18038561	697
ENSMUSG00000019791	protein_coding	Hint3	ENSMUST00000214782	retained_intron		10	-1	30618365	2165
ENSMUSG00000042744	protein_coding	Hectd4	ENSMUST00000128514	retained_intron		5	1	121286833	2239
ENSMUSG00000112210	lincRNA	4930407I19Rik	ENSMUST00000220265	lincRNA		10	1	66145296	923
ENSMUSG00000042744	protein_coding	Hectd4	ENSMUST00000148368	protein_coding		5	1	121291273	663
ENSMUSG00000033355	protein_coding	Rtp4	ENSMUST00000211349	protein_coding		16	1	23609925	842
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000198783	protein_coding	principal1	5	1	137570805	2973
ENSMUSG00000021764	protein_coding	Ndufs4	ENSMUST00000022286	protein_coding	principal1	13	-1	114388258	1698
ENSMUSG00000090088	antisense	Gm15934	ENSMUST00000162062	antisense		10	-1	45289424	525
ENSMUSG00000111526	processed_pseudogene	Gm47433	ENSMUST00000213575	processed_pseudogene		10	-1	45298271	463
ENSMUSG00000042185	protein_coding	Nfrkb	ENSMUST00000086167	protein_coding	principal1	9	1	31386192	5161
ENSMUSG00000100000	lincRNA	1700023F02Rik	ENSMUST00000190260	lincRNA		10	-1	66124050	430
ENSMUSG00000042744	protein_coding	Hectd4	ENSMUST00000100769	protein_coding		5	1	121305730	3103
ENSMUSG00000033355	protein_coding	Rtp4	ENSMUST00000038423	protein_coding	principal1	16	1	23609919	1573
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000199957	retained_intron		5	1	137571451	377
ENSMUSG00000087512	protein_coding	Ccdc201	ENSMUST00000122910	protein_coding	principal1	11	-1	7188569	1007
ENSMUSG00000101155	protein_coding	Sly	ENSMUST00000189109	protein_coding	alternative2	Y	1	57187188	797
ENSMUSG00000019848	protein_coding	Popdc3	ENSMUST00000175658	protein_coding		10	1	45178098	784
ENSMUSG00000021764	protein_coding	Ndufs4	ENSMUST00000232101	protein_coding		13	-1	114388050	716
ENSMUSG00000100000	lincRNA	1700023F02Rik	ENSMUST00000189619	lincRNA		10	-1	66254223	473
ENSMUSG00000042744	protein_coding	Hectd4	ENSMUST00000155743	processed_transcript		5	1	121315755	375
ENSMUSG00000116481	processed_pseudogene	Gm49514	ENSMUST00000229821	processed_pseudogene		16	1	23514270	793
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000197705	retained_intron		5	1	137574515	649
ENSMUSG00000042744	protein_coding	Hectd4	ENSMUST00000130655	processed_transcript		5	1	121320023	458
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000196375	protein_coding		5	1	137578893	454
ENSMUSG00000053110	protein_coding	Yap1	ENSMUST00000065353	protein_coding	alternative2	9	-1	8004596	4171
ENSMUSG00000038011	protein_coding	Dnah10	ENSMUST00000197824	retained_intron		5	1	124801468	735
ENSMUSG00000038011	protein_coding	Dnah10	ENSMUST00000196708	retained_intron		5	1	124805338	6341
ENSMUSG00000101155	protein_coding	Sly	ENSMUST00000191355	protein_coding		Y	1	57187191	548
ENSMUSG00000004948	protein_coding	Zp3	ENSMUST00000005073	protein_coding	principal1	5	1	135980099	1323
ENSMUSG00000053110	protein_coding	Yap1	ENSMUST00000174604	protein_coding		9	-1	8001703	1193
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000196450	retained_intron		5	1	137583285	736
ENSMUSG00000038011	protein_coding	Dnah10	ENSMUST00000058440	protein_coding	principal2	5	1	124725085	14038
ENSMUSG00000021764	protein_coding	Ndufs4	ENSMUST00000225707	nonsense_mediated_decay		13	-1	114388049	686
ENSMUSG00000070421	protein_coding	Olfr658	ENSMUST00000210641	protein_coding	alternative1	7	-1	104647305	2915
ENSMUSG00000101155	protein_coding	Sly	ENSMUST00000190676	processed_transcript		Y	1	57187194	422
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000199069	retained_intron		5	1	137583285	854
ENSMUSG00000100000	lincRNA	1700023F02Rik	ENSMUST00000191223	lincRNA		10	-1	66124064	345
ENSMUSG00000100000	lincRNA	1700023F02Rik	ENSMUST00000186036	lincRNA		10	-1	66124071	270
ENSMUSG00000105583	antisense	Gm43777	ENSMUST00000197269	antisense		5	-1	124818312	376
ENSMUSG00000021764	protein_coding	Ndufs4	ENSMUST00000225035	nonsense_mediated_decay		13	-1	114388063	571
ENSMUSG00000004948	protein_coding	Zp3	ENSMUST00000131563	nonsense_mediated_decay		5	1	135980168	734
ENSMUSG00000070421	protein_coding	Olfr658	ENSMUST00000089296	protein_coding	principal2	7	-1	104647305	2912
ENSMUSG00000021764	protein_coding	Ndufs4	ENSMUST00000225701	retained_intron		13	-1	114388080	383
ENSMUSG00000101155	protein_coding	Sly	ENSMUST00000190292	protein_coding	principal2	Y	1	57187206	922
ENSMUSG00000100000	lincRNA	1700023F02Rik	ENSMUST00000188279	lincRNA		10	-1	66123076	412
ENSMUSG00000116868	unprocessed_pseudogene	Gm29721	ENSMUST00000231697	unprocessed_pseudogene		17	-1	6582703	985
ENSMUSG00000082084	unprocessed_pseudogene	Usp17le-ps	ENSMUST00000117954	unprocessed_pseudogene		7	1	104652252	957
ENSMUSG00000021764	protein_coding	Ndufs4	ENSMUST00000225978	protein_coding		13	-1	114388053	873
ENSMUSG00000029716	protein_coding	Tfr2	ENSMUST00000031729	protein_coding	principal1	5	1	137569851	2926
ENSMUSG00000115715	processed_transcript	Gm33936	ENSMUST00000226859	lincRNA		15	-1	36367117	2038
ENSMUSG00000073922	protein_coding	Olfr659	ENSMUST00000214986	protein_coding	principal1	7	1	104666753	4842
ENSMUSG00000053110	protein_coding	Yap1	ENSMUST00000173264	nonsense_mediated_decay		9	-1	8004390	1480
ENSMUSG00000115715	processed_transcript	Gm33936	ENSMUST00000228917	retained_intron		15	-1	36349754	344
ENSMUSG00000053110	protein_coding	Yap1	ENSMUST00000173085	nonsense_mediated_decay		9	-1	8004390	1432
ENSMUSG00000053110	protein_coding	Yap1	ENSMUST00000174577	nonsense_mediated_decay		9	-1	8004390	1444
ENSMUSG00000115715	processed_transcript	Gm33936	ENSMUST00000228118	lincRNA		15	-1	36367107	429
ENSMUSG00000019848	protein_coding	Popdc3	ENSMUST00000019994	protein_coding	principal1	10	1	45289305	1853
ENSMUSG00000073922	protein_coding	Olfr659	ENSMUST00000098170	protein_coding	principal1	7	1	104670704	969
ENSMUSG00000053110	protein_coding	Yap1	ENSMUST00000174127	processed_transcript		9	-1	7965821	276
ENSMUSG00000082108	processed_pseudogene	Gm13777	ENSMUST00000118208	processed_pseudogene		2	-1	91031122	345
ENSMUSG00000101503	antisense	Gm28364	ENSMUST00000187908	antisense		1	1	74281161	334
ENSMUSG00000081694	unprocessed_pseudogene	Olfr660-ps1	ENSMUST00000121526	unprocessed_pseudogene		7	1	104678718	375
ENSMUSG00000019848	protein_coding	Popdc3	ENSMUST00000161803	protein_coding		10	1	45289402	1369
ENSMUSG00000090892	protein_coding	Vmn2r41	ENSMUST00000168807	protein_coding	principal1	7	-1	8161654	3617
ENSMUSG00000073920	protein_coding	Olfr661	ENSMUST00000214876	protein_coding	principal1	7	1	104686501	3790
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000029910	protein_coding	principal1	4	-1	6454271	3507
ENSMUSG00000053110	protein_coding	Yap1	ENSMUST00000173227	processed_transcript		9	-1	8003757	674
ENSMUSG00000073920	protein_coding	Olfr661	ENSMUST00000215864	processed_transcript		7	1	104686922	3521
ENSMUSG00000021270	protein_coding	Hsp90aa1	ENSMUST00000094361	protein_coding	principal1	12	-1	110696395	3281
ENSMUSG00000073920	protein_coding	Olfr661	ENSMUST00000098168	protein_coding	principal1	7	1	104688013	964
ENSMUSG00000100295	unprocessed_pseudogene	Gm28165	ENSMUST00000190669	unprocessed_pseudogene		Y	-1	57274243	694
ENSMUSG00000083853	processed_pseudogene	Gm15696	ENSMUST00000121730	processed_pseudogene		16	-1	31970806	445
ENSMUSG00000053110	protein_coding	Yap1	ENSMUST00000172870	processed_transcript		9	-1	8003775	453
ENSMUSG00000081404	processed_pseudogene	Gm15694	ENSMUST00000121984	processed_pseudogene		16	-1	31987460	283
ENSMUSG00000053110	protein_coding	Yap1	ENSMUST00000174300	retained_intron		9	-1	8004596	5282
ENSMUSG00000100578	lincRNA	Gm28709	ENSMUST00000186967	lincRNA		Y	-1	57354175	456
ENSMUSG00000101245	lincRNA	Gm28965	ENSMUST00000186015	lincRNA		Y	1	57347488	1500
ENSMUSG00000021270	protein_coding	Hsp90aa1	ENSMUST00000021698	protein_coding	principal1	12	-1	110696289	2852
ENSMUSG00000021270	protein_coding	Hsp90aa1	ENSMUST00000129005	retained_intron		12	-1	110693180	325
ENSMUSG00000101245	lincRNA	Gm28965	ENSMUST00000187947	lincRNA		Y	1	57347940	437
ENSMUSG00000092185	processed_transcript	Gm20416	ENSMUST00000174760	processed_transcript		9	1	7965838	484
ENSMUSG00000021270	protein_coding	Hsp90aa1	ENSMUST00000134967	retained_intron		12	-1	110694292	487
ENSMUSG00000021270	protein_coding	Hsp90aa1	ENSMUST00000145255	retained_intron		12	-1	110695672	924
ENSMUSG00000003031	protein_coding	Cdkn1b	ENSMUST00000067327	protein_coding	principal1	6	1	134920401	4552
ENSMUSG00000116651	processed_pseudogene	Gm17844	ENSMUST00000232201	processed_pseudogene		16	-1	89634140	1098
ENSMUSG00000100456	transcribed_unprocessed_pseudogene	Gm21868	ENSMUST00000185623	processed_transcript		Y	-1	57459489	1230
ENSMUSG00000021270	protein_coding	Hsp90aa1	ENSMUST00000155242	protein_coding		12	-1	110702728	711
ENSMUSG00000100456	transcribed_unprocessed_pseudogene	Gm21868	ENSMUST00000190370	transcribed_unprocessed_pseudogene		Y	-1	57457969	694
ENSMUSG00000107282	processed_pseudogene	Gm43630	ENSMUST00000201550	processed_pseudogene		6	1	22622918	776
ENSMUSG00000021270	protein_coding	Hsp90aa1	ENSMUST00000124156	protein_coding		12	-1	110696258	427
ENSMUSG00000113347	processed_pseudogene	Gm47323	ENSMUST00000220496	processed_pseudogene		13	1	12160754	211
ENSMUSG00000017615	protein_coding	Tnfaip1	ENSMUST00000017759	protein_coding	principal1	11	-1	78536271	3720
ENSMUSG00000029149	protein_coding	Krtcap3	ENSMUST00000054829	protein_coding	principal1	5	1	31251706	904
ENSMUSG00000022774	protein_coding	Ncbp2	ENSMUST00000023460	protein_coding	principal1	16	1	31948513	2070
ENSMUSG00000021270	protein_coding	Hsp90aa1	ENSMUST00000149189	protein_coding		12	-1	110695951	481
ENSMUSG00000017615	protein_coding	Tnfaip1	ENSMUST00000108277	protein_coding	principal1	11	-1	78536332	3768
ENSMUSG00000096122	protein_coding	Gm21943	ENSMUST00000178181	protein_coding	principal1	Y	-1	57533744	1229
ENSMUSG00000022774	protein_coding	Ncbp2	ENSMUST00000140965	retained_intron		16	1	31948601	762
ENSMUSG00000029149	protein_coding	Krtcap3	ENSMUST00000201393	retained_intron		5	1	31251716	1088
ENSMUSG00000033763	protein_coding	Mtss2	ENSMUST00000052457	protein_coding	principal1	8	1	110721476	4717
ENSMUSG00000022774	protein_coding	Ncbp2	ENSMUST00000126215	protein_coding		16	1	31948606	574
ENSMUSG00000022774	protein_coding	Ncbp2	ENSMUST00000115178	processed_transcript		16	1	31948646	391
ENSMUSG00000080928	processed_pseudogene	Hmgb1-ps6	ENSMUST00000119503	processed_pseudogene		16	-1	31991868	616
ENSMUSG00000025190	protein_coding	Got1	ENSMUST00000026196	protein_coding	principal1	19	-1	43524605	2058
ENSMUSG00000020617	protein_coding	1700012B07Rik	ENSMUST00000106674	protein_coding	principal4	11	-1	109828046	2035
ENSMUSG00000029149	protein_coding	Krtcap3	ENSMUST00000201625	protein_coding	principal1	5	1	31251722	902
ENSMUSG00000033763	protein_coding	Mtss2	ENSMUST00000144041	protein_coding		8	1	110725726	3225
ENSMUSG00000003031	protein_coding	Cdkn1b	ENSMUST00000003115	protein_coding	principal1	6	1	134920401	2393
ENSMUSG00000029149	protein_coding	Krtcap3	ENSMUST00000201937	protein_coding	principal1	5	1	31251725	889
ENSMUSG00000025190	protein_coding	Got1	ENSMUST00000133325	nonsense_mediated_decay		19	-1	43515865	1373
ENSMUSG00000029149	protein_coding	Krtcap3	ENSMUST00000201697	retained_intron		5	1	31251762	736
ENSMUSG00000003031	protein_coding	Cdkn1b	ENSMUST00000204807	protein_coding	principal1	6	1	134920513	1757
ENSMUSG00000025190	protein_coding	Got1	ENSMUST00000132504	retained_intron		19	-1	43504796	661
ENSMUSG00000029149	protein_coding	Krtcap3	ENSMUST00000202007	retained_intron		5	1	31251927	794
ENSMUSG00000029149	protein_coding	Krtcap3	ENSMUST00000202384	retained_intron		5	1	31252336	773
ENSMUSG00000029149	protein_coding	Krtcap3	ENSMUST00000201565	retained_intron		5	1	31252480	522
ENSMUSG00000029149	protein_coding	Krtcap3	ENSMUST00000201672	retained_intron		5	1	31252555	548
ENSMUSG00000020617	protein_coding	1700012B07Rik	ENSMUST00000020941	protein_coding	alternative2	11	-1	109828022	919
ENSMUSG00000033763	protein_coding	Mtss2	ENSMUST00000141527	processed_transcript		8	1	110726417	697
ENSMUSG00000025190	protein_coding	Got1	ENSMUST00000124954	processed_transcript		19	-1	43524485	720
ENSMUSG00000114090	processed_pseudogene	Gm9472	ENSMUST00000221625	processed_pseudogene		12	-1	35819264	526
ENSMUSG00000086546	antisense	Gm13709	ENSMUST00000138573	antisense		2	1	73370909	614
ENSMUSG00000103807	TR_V_pseudogene	Trbv6	ENSMUST00000193743	TR_V_pseudogene		6	1	41066879	276
ENSMUSG00000020617	protein_coding	1700012B07Rik	ENSMUST00000143578	protein_coding		11	-1	109814074	582
ENSMUSG00000033763	protein_coding	Mtss2	ENSMUST00000149273	protein_coding		8	1	110727346	866
ENSMUSG00000033763	protein_coding	Mtss2	ENSMUST00000141302	protein_coding		8	1	110727357	1091
ENSMUSG00000033763	protein_coding	Mtss2	ENSMUST00000133848	retained_intron		8	1	110737117	720
ENSMUSG00000038415	protein_coding	Foxq1	ENSMUST00000042118	protein_coding	principal1	13	1	31556134	4843
ENSMUSG00000040410	protein_coding	Fbxl4	ENSMUST00000131972	processed_transcript		4	1	22357543	342
ENSMUSG00000067851	protein_coding	Arfgef1	ENSMUST00000088615	protein_coding	principal1	1	-1	10232670	6978
ENSMUSG00000034292	protein_coding	Traf3ip1	ENSMUST00000189341	protein_coding	alternative2	1	1	91494647	2257
ENSMUSG00000102622	TR_V_pseudogene	Trbv7	ENSMUST00000193339	TR_V_pseudogene		6	1	41080253	402
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000081721	protein_coding	principal3	6	-1	47595030	2787
ENSMUSG00000020930	protein_coding	Ccdc103	ENSMUST00000021307	protein_coding	principal1	11	1	102881204	1841
ENSMUSG00000042185	protein_coding	Nfrkb	ENSMUST00000132329	nonsense_mediated_decay		9	1	31386197	5398
ENSMUSG00000075272	protein_coding	Ttc30a2	ENSMUST00000099995	protein_coding	principal1	2	-1	75978170	2431
ENSMUSG00000067851	protein_coding	Arfgef1	ENSMUST00000187417	retained_intron		1	-1	10141701	568
ENSMUSG00000045896	protein_coding	Paip2b	ENSMUST00000058383	protein_coding	principal1	6	-1	83831741	3982
ENSMUSG00000067851	protein_coding	Arfgef1	ENSMUST00000142497	retained_intron		1	-1	10154530	729
ENSMUSG00000042185	protein_coding	Nfrkb	ENSMUST00000131540	nonsense_mediated_decay		9	1	31386204	645
ENSMUSG00000020930	protein_coding	Ccdc103	ENSMUST00000159834	protein_coding		11	1	102881245	1156
ENSMUSG00000039741	protein_coding	Bahcc1	ENSMUST00000122148	protein_coding	alternative2	11	1	120232947	10712
ENSMUSG00000042185	protein_coding	Nfrkb	ENSMUST00000152593	nonsense_mediated_decay		9	1	31386213	5208
ENSMUSG00000042185	protein_coding	Nfrkb	ENSMUST00000215211	protein_coding		9	1	31386456	1338
ENSMUSG00000045896	protein_coding	Paip2b	ENSMUST00000125493	retained_intron		6	-1	83810198	537
ENSMUSG00000034292	protein_coding	Traf3ip1	ENSMUST00000047242	protein_coding	principal2	1	1	91494694	3474
ENSMUSG00000067851	protein_coding	Arfgef1	ENSMUST00000156563	retained_intron		1	-1	10160060	3526
ENSMUSG00000039741	protein_coding	Bahcc1	ENSMUST00000142439	processed_transcript		11	1	120236445	625
ENSMUSG00000039741	protein_coding	Bahcc1	ENSMUST00000118987	protein_coding	alternative2	11	1	120236699	10712
ENSMUSG00000067851	protein_coding	Arfgef1	ENSMUST00000128834	retained_intron		1	-1	10161306	458
ENSMUSG00000075510	protein_coding	Fam187a	ENSMUST00000100369	protein_coding	principal1	11	1	102885169	1563
ENSMUSG00000067851	protein_coding	Arfgef1	ENSMUST00000131556	protein_coding		1	-1	10232670	3424
ENSMUSG00000042185	protein_coding	Nfrkb	ENSMUST00000134528	retained_intron		9	1	31392788	3295
ENSMUSG00000042185	protein_coding	Nfrkb	ENSMUST00000215544	retained_intron		9	1	31396151	3048
ENSMUSG00000045896	protein_coding	Paip2b	ENSMUST00000145593	retained_intron		6	-1	83831713	649
ENSMUSG00000039741	protein_coding	Bahcc1	ENSMUST00000143667	processed_transcript		11	1	120289793	2134
ENSMUSG00000042185	protein_coding	Nfrkb	ENSMUST00000150179	retained_intron		9	1	31397232	669
ENSMUSG00000045896	protein_coding	Paip2b	ENSMUST00000142806	retained_intron		6	-1	83831713	2150
ENSMUSG00000067851	protein_coding	Arfgef1	ENSMUST00000186813	retained_intron		1	-1	10210107	1162
ENSMUSG00000075271	protein_coding	Ttc30a1	ENSMUST00000099994	protein_coding	principal1	2	-1	75981967	3721
ENSMUSG00000045896	protein_coding	Paip2b	ENSMUST00000205421	retained_intron		6	-1	83831700	244
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000114618	protein_coding	alternative1	6	-1	47595030	2775
ENSMUSG00000042185	protein_coding	Nfrkb	ENSMUST00000128375	retained_intron		9	1	31399219	4808
ENSMUSG00000067851	protein_coding	Arfgef1	ENSMUST00000186720	retained_intron		1	-1	10214213	810
ENSMUSG00000042185	protein_coding	Nfrkb	ENSMUST00000143558	retained_intron		9	1	31409427	819
ENSMUSG00000039741	protein_coding	Bahcc1	ENSMUST00000044985	protein_coding	principal3	11	1	120232947	10726
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000114616	protein_coding		6	-1	47595030	2670
ENSMUSG00000034292	protein_coding	Traf3ip1	ENSMUST00000187588	retained_intron		1	1	91518262	2374
ENSMUSG00000108107	processed_pseudogene	Gm5312	ENSMUST00000203728	processed_pseudogene		6	1	83841682	547
ENSMUSG00000102556	TEC	Gm37569	ENSMUST00000192111	TEC		1	-1	10198802	1722
ENSMUSG00000101338	lincRNA	Gm28139	ENSMUST00000189480	lincRNA		10	1	66640918	643
ENSMUSG00000118509	unprocessed_pseudogene	AL671885.1	ENSMUST00000238979	unprocessed_pseudogene		X	1	20778816	353
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000203857	retained_intron		6	-1	47532116	500
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000092648	protein_coding		6	-1	47577660	2115
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000113352	protein_coding	alternative1	2	-1	32353263	4605
ENSMUSG00000107644	processed_pseudogene	Gm6342	ENSMUST00000204344	processed_pseudogene		6	-1	83845095	766
ENSMUSG00000115278	lincRNA	Gm34150	ENSMUST00000226399	lincRNA		15	1	36375049	332
ENSMUSG00000113940	lincRNA	Gm40477	ENSMUST00000221505	lincRNA		12	-1	85436249	881
ENSMUSG00000113940	lincRNA	Gm40477	ENSMUST00000220805	lincRNA		12	-1	85436081	555
ENSMUSG00000114981	lincRNA	Gm34093	ENSMUST00000226470	lincRNA		15	-1	36380789	281
ENSMUSG00000118308	processed_pseudogene	Gm19179	ENSMUST00000236158	processed_pseudogene		19	1	43544183	600
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000171614	retained_intron		6	-1	47535125	1522
ENSMUSG00000118221	lincRNA	Gm50194	ENSMUST00000236043	lincRNA		19	1	43528312	2024
ENSMUSG00000114981	lincRNA	Gm34093	ENSMUST00000226850	lincRNA		15	-1	36390172	837
ENSMUSG00000117991	lincRNA	Gm34636	ENSMUST00000235198	lincRNA		19	-1	43573357	749
ENSMUSG00000118253	processed_pseudogene	Gm50185	ENSMUST00000236896	processed_pseudogene		19	1	58489282	322
ENSMUSG00000112247	processed_pseudogene	Gm47894	ENSMUST00000218242	processed_pseudogene		10	-1	66691615	274
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000170311	retained_intron		6	-1	47540709	483
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000094456	protein_coding	alternative2	2	-1	151632549	4607
ENSMUSG00000112202	lincRNA	Gm31181	ENSMUST00000217731	lincRNA		10	1	66698241	2283
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000165492	retained_intron		6	-1	47545883	2299
ENSMUSG00000092250	lincRNA	Gm20467	ENSMUST00000172872	lincRNA		19	-1	43610625	994
ENSMUSG00000112159	processed_pseudogene	Gm18777	ENSMUST00000219914	processed_pseudogene		10	-1	66741159	522
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000164006	nonsense_mediated_decay		6	-1	47551761	512
ENSMUSG00000112383	lincRNA	Gm47895	ENSMUST00000220363	lincRNA		10	1	66759454	1273
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000139624	nonsense_mediated_decay		2	-1	32353283	3337
ENSMUSG00000104693	sense_intronic	Gm42941	ENSMUST00000200347	sense_intronic		3	-1	101597130	1321
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000167278	nonsense_mediated_decay		6	-1	47551761	665
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000169889	nonsense_mediated_decay		6	-1	47554214	666
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000091089	protein_coding	principal3	2	-1	32353284	3764
ENSMUSG00000020171	protein_coding	Yeats4	ENSMUST00000218887	nonsense_mediated_decay		10	-1	117224490	1339
ENSMUSG00000044220	protein_coding	Nkx2-3	ENSMUST00000057178	protein_coding	principal1	19	1	43612325	2112
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000204798	nonsense_mediated_decay		6	-1	47595058	1472
ENSMUSG00000040410	protein_coding	Fbxl4	ENSMUST00000039234	protein_coding	principal1	4	1	22357543	2546
ENSMUSG00000112425	lincRNA	Gm47896	ENSMUST00000220426	lincRNA		10	1	66809840	662
ENSMUSG00000118236	lincRNA	Gm34922	ENSMUST00000237632	lincRNA		19	1	43645750	1214
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000133043	protein_coding		6	-1	47595341	866
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000028951	protein_coding	principal3	2	-1	151632573	4730
ENSMUSG00000029687	protein_coding	Ezh2	ENSMUST00000170327	processed_transcript		6	-1	47578010	834
ENSMUSG00000040410	protein_coding	Fbxl4	ENSMUST00000185029	nonsense_mediated_decay		4	1	22357560	3641
ENSMUSG00000112514	lincRNA	Gm47897	ENSMUST00000217783	lincRNA		10	1	66824169	426
ENSMUSG00000031837	protein_coding	Necab2	ENSMUST00000098363	protein_coding	principal1	8	1	119446719	1976
ENSMUSG00000041737	protein_coding	Tmem45b	ENSMUST00000048050	protein_coding	principal1	9	-1	31464462	1799
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000109875	protein_coding	principal3	2	-1	151632567	4910
ENSMUSG00000040410	protein_coding	Fbxl4	ENSMUST00000184455	nonsense_mediated_decay		4	1	22357571	2478
ENSMUSG00000040410	protein_coding	Fbxl4	ENSMUST00000184582	nonsense_mediated_decay		4	1	22357616	2570
ENSMUSG00000041737	protein_coding	Tmem45b	ENSMUST00000217007	protein_coding		9	-1	31464201	783
ENSMUSG00000040414	protein_coding	Slc25a28	ENSMUST00000236286	processed_transcript		19	-1	43665974	1046
ENSMUSG00000103000	TEC	Gm37900	ENSMUST00000195510	TEC		4	1	22408291	3805
ENSMUSG00000041737	protein_coding	Tmem45b	ENSMUST00000213807	protein_coding		9	-1	31464214	391
ENSMUSG00000113848	processed_pseudogene	Gm16419	ENSMUST00000221057	processed_pseudogene		13	-1	12172150	625
ENSMUSG00000031837	protein_coding	Necab2	ENSMUST00000148328	processed_transcript		8	1	119452432	785
ENSMUSG00000025090	protein_coding	Ccdc172	ENSMUST00000235305	protein_coding	alternative2	19	1	58511993	855
ENSMUSG00000041737	protein_coding	Tmem45b	ENSMUST00000216875	retained_intron		9	-1	31464215	2839
ENSMUSG00000098187	processed_pseudogene	Gm8927	ENSMUST00000181978	processed_pseudogene		6	1	22703436	981
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000109877	protein_coding	alternative2	2	-1	151632593	3367
ENSMUSG00000028411	protein_coding	Aptx	ENSMUST00000030119	protein_coding	alternative2	4	-1	40703194	5250
ENSMUSG00000111468	TEC	5033425B01Rik	ENSMUST00000213948	TEC		9	-1	31439767	1303
ENSMUSG00000113789	TEC	Gm47322	ENSMUST00000221565	TEC		13	-1	12179281	1824
ENSMUSG00000111548	processed_pseudogene	Gm8162	ENSMUST00000213951	processed_pseudogene		9	-1	31434707	665
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000137936	protein_coding		2	-1	151632471	633
ENSMUSG00000020171	protein_coding	Yeats4	ENSMUST00000020382	protein_coding	principal1	10	-1	117224507	1327
ENSMUSG00000040414	protein_coding	Slc25a28	ENSMUST00000237364	nonsense_mediated_decay		19	-1	43667143	1194
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000145434	retained_intron		2	-1	151632526	437
ENSMUSG00000101943	lincRNA	Gm28532	ENSMUST00000190408	lincRNA		Y	-1	57563464	572
ENSMUSG00000111655	bidirectional_promoter_lncRNA	4930434F21Rik	ENSMUST00000216639	bidirectional_promoter_lncRNA		9	1	31463906	191
ENSMUSG00000020171	protein_coding	Yeats4	ENSMUST00000219609	retained_intron		10	-1	117217358	556
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000146172	protein_coding		2	-1	151632540	845
ENSMUSG00000111655	bidirectional_promoter_lncRNA	4930434F21Rik	ENSMUST00000214381	bidirectional_promoter_lncRNA		9	1	31467317	742
ENSMUSG00000025278	protein_coding	Flnb	ENSMUST00000052678	protein_coding	principal1	14	1	7817957	9100
ENSMUSG00000106803	processed_pseudogene	Gm8930	ENSMUST00000201693	processed_pseudogene		6	1	22733733	768
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000002176	protein_coding	alternative1	2	-1	7396000	7718
ENSMUSG00000115395	lincRNA	Gm49224	ENSMUST00000227487	lincRNA		15	-1	36436691	618
ENSMUSG00000022836	protein_coding	Mylk	ENSMUST00000023538	protein_coding	principal1	16	1	34784921	7824
ENSMUSG00000025278	protein_coding	Flnb	ENSMUST00000228206	processed_transcript		14	1	7884741	111
ENSMUSG00000112462	bidirectional_promoter_lncRNA	Gm48772	ENSMUST00000218027	bidirectional_promoter_lncRNA		10	1	117224589	364
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000160024	protein_coding		14	-1	31139848	413
ENSMUSG00000109821	processed_pseudogene	Gm6593	ENSMUST00000211165	processed_pseudogene		7	-1	104693432	1135
ENSMUSG00000025090	protein_coding	Ccdc172	ENSMUST00000069419	protein_coding	principal2	19	1	58512022	1009
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000148755	protein_coding		2	-1	151632561	354
ENSMUSG00000000182	protein_coding	Fgf23	ENSMUST00000000186	protein_coding	principal1	6	1	127072902	1814
ENSMUSG00000040414	protein_coding	Slc25a28	ENSMUST00000046038	protein_coding	principal1	19	-1	43674881	1535
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000141692	processed_transcript		2	-1	151632573	681
ENSMUSG00000028411	protein_coding	Aptx	ENSMUST00000129021	nonsense_mediated_decay		4	-1	40703187	1378
ENSMUSG00000028411	protein_coding	Aptx	ENSMUST00000108103	protein_coding	alternative2	4	-1	40703162	2391
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000143367	processed_transcript		2	-1	151632567	1967
ENSMUSG00000040414	protein_coding	Slc25a28	ENSMUST00000235953	retained_intron		19	-1	43674860	3724
ENSMUSG00000027457	protein_coding	Snph	ENSMUST00000133378	retained_intron		2	-1	151632553	620
ENSMUSG00000102962	IG_C_pseudogene	Gm37944	ENSMUST00000194233	IG_C_pseudogene		12	1	113315712	414
ENSMUSG00000040414	protein_coding	Slc25a28	ENSMUST00000236433	protein_coding		19	-1	43674881	767
ENSMUSG00000110922	lincRNA	Gm35177	ENSMUST00000216525	lincRNA		9	1	40547360	623
ENSMUSG00000006299	protein_coding	Aamp	ENSMUST00000006462	protein_coding	principal3	1	-1	74284738	1817
ENSMUSG00000025735	protein_coding	Rhbdl1	ENSMUST00000026831	protein_coding	principal1	17	-1	25837295	1711
ENSMUSG00000111858	lincRNA	Gm48277	ENSMUST00000213520	lincRNA		9	-1	40559507	899
ENSMUSG00000111858	lincRNA	Gm48277	ENSMUST00000214616	lincRNA		9	-1	40560929	1742
ENSMUSG00000094664	processed_pseudogene	Rpl35a-ps6	ENSMUST00000148282	processed_pseudogene		5	-1	123255813	333
ENSMUSG00000022772	protein_coding	Senp5	ENSMUST00000231360	protein_coding	principal1	16	-1	32003287	6332
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000078352	protein_coding	alternative1	2	-1	32353290	3246
ENSMUSG00000028411	protein_coding	Aptx	ENSMUST00000068125	protein_coding	principal4	4	-1	40702914	5383
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000143704	retained_intron		4	-1	6454271	4423
ENSMUSG00000022772	protein_coding	Senp5	ENSMUST00000023457	protein_coding	principal1	16	-1	32003163	3370
ENSMUSG00000070844	protein_coding	Vmn2r42	ENSMUST00000233668	nonsense_mediated_decay		7	-1	8200320	4196
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000149015	retained_intron		4	-1	6399006	818
ENSMUSG00000006299	protein_coding	Aamp	ENSMUST00000186833	retained_intron		1	-1	74284016	2762
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000159480	retained_intron		14	-1	31140866	1236
ENSMUSG00000025735	protein_coding	Rhbdl1	ENSMUST00000183929	protein_coding		17	-1	25837082	1349
ENSMUSG00000028411	protein_coding	Aptx	ENSMUST00000155710	nonsense_mediated_decay		4	-1	40702716	639
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000113350	protein_coding	alternative1	2	-1	32353302	3258
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000156715	processed_transcript		4	-1	6454096	525
ENSMUSG00000022772	protein_coding	Senp5	ENSMUST00000155515	nonsense_mediated_decay		16	-1	31989177	983
ENSMUSG00000028411	protein_coding	Aptx	ENSMUST00000128810	processed_transcript		4	-1	40694507	355
ENSMUSG00000025735	protein_coding	Rhbdl1	ENSMUST00000184865	protein_coding		17	-1	25837251	610
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000143566	processed_transcript		4	-1	6454255	2870
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000113365	protein_coding	alternative1	2	-1	32353338	3257
ENSMUSG00000022772	protein_coding	Senp5	ENSMUST00000129900	protein_coding		16	-1	31990353	1993
ENSMUSG00000028576	protein_coding	Ift74	ENSMUST00000030311	protein_coding	principal1	4	1	94614491	2139
ENSMUSG00000113470	lincRNA	4930448F12Rik	ENSMUST00000220795	lincRNA		13	-1	18100202	859
ENSMUSG00000113893	processed_pseudogene	Gm48800	ENSMUST00000221924	processed_pseudogene		13	-1	18095954	1483
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000201433	protein_coding	alternative2	2	-1	32353234	3146
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000156078	retained_intron		4	-1	6423988	4705
ENSMUSG00000070394	protein_coding	Tmem256	ENSMUST00000133967	protein_coding		11	1	69838514	421
ENSMUSG00000006299	protein_coding	Aamp	ENSMUST00000178235	protein_coding	alternative1	1	-1	74284680	1756
ENSMUSG00000028576	protein_coding	Ift74	ENSMUST00000107104	protein_coding		4	1	94614491	1713
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000143983	retained_intron		4	-1	6432698	639
ENSMUSG00000022772	protein_coding	Senp5	ENSMUST00000144320	retained_intron		16	-1	32003178	2804
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000156283	processed_transcript		4	-1	6453579	663
ENSMUSG00000022836	protein_coding	Mylk	ENSMUST00000232482	retained_intron		16	1	34900255	3730
ENSMUSG00000031864	protein_coding	Ints10	ENSMUST00000034328	protein_coding	principal3	8	1	68793929	4201
ENSMUSG00000116739	sense_intronic	Gm49733	ENSMUST00000232628	sense_intronic		16	-1	31987123	293
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000145399	processed_transcript		4	-1	6446327	930
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000124344	protein_coding		4	-1	6454097	450
ENSMUSG00000022836	protein_coding	Mylk	ENSMUST00000232541	processed_transcript		16	1	34905139	619
ENSMUSG00000028245	protein_coding	Nsmaf	ENSMUST00000124656	processed_transcript		4	-1	6444393	294
ENSMUSG00000022836	protein_coding	Mylk	ENSMUST00000231998	processed_transcript		16	1	34930342	801
ENSMUSG00000006299	protein_coding	Aamp	ENSMUST00000187046	protein_coding		1	-1	74283979	524
ENSMUSG00000028576	protein_coding	Ift74	ENSMUST00000152289	processed_transcript		4	1	94679180	549
ENSMUSG00000031864	protein_coding	Ints10	ENSMUST00000110241	protein_coding		8	1	68793935	2322
ENSMUSG00000022836	protein_coding	Mylk	ENSMUST00000232066	processed_transcript		16	1	34953058	688
ENSMUSG00000022836	protein_coding	Mylk	ENSMUST00000232477	processed_transcript		16	1	34994179	393
ENSMUSG00000006299	protein_coding	Aamp	ENSMUST00000191258	retained_intron		1	-1	74283142	1001
ENSMUSG00000022836	protein_coding	Mylk	ENSMUST00000231589	protein_coding		16	1	34994807	1620
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000162169	retained_intron		14	-1	31142832	2344
ENSMUSG00000006299	protein_coding	Aamp	ENSMUST00000190008	protein_coding		1	-1	74284421	422
ENSMUSG00000031864	protein_coding	Ints10	ENSMUST00000146322	retained_intron		8	1	68793956	1408
ENSMUSG00000070394	protein_coding	Tmem256	ENSMUST00000094065	protein_coding	principal1	11	1	69838524	492
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000229536	processed_transcript		15	-1	76347693	395
ENSMUSG00000070844	protein_coding	Vmn2r42	ENSMUST00000086282	protein_coding	principal2	7	-1	8200320	4516
ENSMUSG00000093918	protein_coding	Gm21677	ENSMUST00000189592	protein_coding	principal1	Y	-1	3306449	1576
ENSMUSG00000116665	antisense	E130310I04Rik	ENSMUST00000231694	antisense		16	-1	34958994	556
ENSMUSG00000070394	protein_coding	Tmem256	ENSMUST00000156556	processed_transcript		11	1	69838555	387
ENSMUSG00000029442	protein_coding	Wdr66	ENSMUST00000121964	protein_coding	principal1	5	1	123252102	4873
ENSMUSG00000070844	protein_coding	Vmn2r42	ENSMUST00000146278	protein_coding	alternative2	7	-1	8200320	4366
ENSMUSG00000031864	protein_coding	Ints10	ENSMUST00000110242	protein_coding		8	1	68793956	4250
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000129156	nonsense_mediated_decay		2	-1	32320581	1520
ENSMUSG00000093918	protein_coding	Gm21677	ENSMUST00000179508	protein_coding	principal1	Y	-1	3303466	1143
ENSMUSG00000070844	protein_coding	Vmn2r42	ENSMUST00000142934	protein_coding		7	-1	8200320	5056
ENSMUSG00000070394	protein_coding	Tmem256	ENSMUST00000139085	processed_transcript		11	1	69838563	953
ENSMUSG00000116665	antisense	E130310I04Rik	ENSMUST00000232399	antisense		16	-1	34958878	3493
ENSMUSG00000099455	processed_pseudogene	Gm29288	ENSMUST00000191582	processed_pseudogene		Y	1	3310714	901
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000201494	protein_coding		2	-1	32353270	2732
ENSMUSG00000031864	protein_coding	Ints10	ENSMUST00000145140	retained_intron		8	1	68793974	2328
ENSMUSG00000070844	protein_coding	Vmn2r42	ENSMUST00000136957	retained_intron		7	-1	8192843	1012
ENSMUSG00000070394	protein_coding	Tmem256	ENSMUST00000128281	processed_transcript		11	1	69838638	603
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000145885	retained_intron		2	-1	32310635	899
ENSMUSG00000107303	processed_pseudogene	Gm18861	ENSMUST00000202509	processed_pseudogene		6	1	22759399	1186
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000155269	protein_coding		2	-1	32312923	656
ENSMUSG00000031864	protein_coding	Ints10	ENSMUST00000070713	protein_coding	alternative1	8	1	68794014	4192
ENSMUSG00000100724	transcribed_unprocessed_pseudogene	Gm28533	ENSMUST00000190106	processed_transcript		Y	-1	57600691	1346
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000202578	protein_coding	alternative1	2	-1	32353302	2820
ENSMUSG00000100724	transcribed_unprocessed_pseudogene	Gm28533	ENSMUST00000186741	transcribed_unprocessed_pseudogene		Y	-1	57598875	570
ENSMUSG00000107059	processed_pseudogene	Gm43629	ENSMUST00000201782	processed_pseudogene		6	-1	22805329	704
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000139291	protein_coding		2	-1	32312893	641
ENSMUSG00000031864	protein_coding	Ints10	ENSMUST00000140309	retained_intron		8	1	68811948	555
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000201440	nonsense_mediated_decay		2	-1	32312889	621
ENSMUSG00000031864	protein_coding	Ints10	ENSMUST00000147072	protein_coding		8	1	68820686	607
ENSMUSG00000099388	lincRNA	Gm28966	ENSMUST00000188951	lincRNA		Y	1	57643572	1501
ENSMUSG00000020429	protein_coding	Igfbp1	ENSMUST00000020704	protein_coding	principal1	11	1	7197782	1525
ENSMUSG00000027175	protein_coding	Tcp11l1	ENSMUST00000111118	protein_coding	principal1	2	-1	104712156	5474
ENSMUSG00000099388	lincRNA	Gm28966	ENSMUST00000189267	lincRNA		Y	1	57644026	439
ENSMUSG00000094511	protein_coding	Gm21693	ENSMUST00000186047	protein_coding	principal1	Y	-1	3345329	1576
ENSMUSG00000031864	protein_coding	Ints10	ENSMUST00000212064	processed_transcript		8	1	68828857	592
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000156866	processed_transcript		2	-1	32317331	810
ENSMUSG00000082008	processed_pseudogene	Gm12390	ENSMUST00000117897	processed_pseudogene		4	-1	40716991	397
ENSMUSG00000081745	processed_pseudogene	Gm15549	ENSMUST00000121595	processed_pseudogene		8	1	68798867	622
ENSMUSG00000094511	protein_coding	Gm21693	ENSMUST00000178531	protein_coding	principal1	Y	-1	3335010	1143
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000141633	retained_intron		2	-1	32313077	495
ENSMUSG00000029442	protein_coding	Wdr66	ENSMUST00000143629	retained_intron		5	1	123271595	4009
ENSMUSG00000101141	processed_pseudogene	Gm21139	ENSMUST00000186594	processed_pseudogene		Y	-1	3350532	877
ENSMUSG00000057719	protein_coding	Sh3rf2	ENSMUST00000072008	protein_coding	principal1	18	1	42053667	5092
ENSMUSG00000029442	protein_coding	Wdr66	ENSMUST00000197763	retained_intron		5	1	123273464	2173
ENSMUSG00000026825	protein_coding	Dnm1	ENSMUST00000139238	nonsense_mediated_decay		2	-1	32353251	695
ENSMUSG00000033161	protein_coding	Atp1a1	ENSMUST00000036493	protein_coding	principal1	3	-1	101604684	3679
ENSMUSG00000029442	protein_coding	Wdr66	ENSMUST00000200666	retained_intron		5	1	123278128	1458
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000230314	nonsense_mediated_decay		15	-1	76350750	1271
ENSMUSG00000106897	TEC	Gm43027	ENSMUST00000202906	TEC		5	1	67980671	3691
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000169353	protein_coding	alternative2	8	-1	95110424	2898
ENSMUSG00000107257	processed_pseudogene	Gm43028	ENSMUST00000202561	processed_pseudogene		5	-1	67989007	481
ENSMUSG00000033161	protein_coding	Atp1a1	ENSMUST00000130649	retained_intron		3	-1	101577560	911
ENSMUSG00000033161	protein_coding	Atp1a1	ENSMUST00000136340	retained_intron		3	-1	101589039	701
ENSMUSG00000057719	protein_coding	Sh3rf2	ENSMUST00000074679	protein_coding		18	1	42053710	4444
ENSMUSG00000104737	sense_intronic	Gm42937	ENSMUST00000197360	sense_intronic		3	-1	101581055	752
ENSMUSG00000029442	protein_coding	Wdr66	ENSMUST00000150155	nonsense_mediated_decay		5	1	123290009	1311
ENSMUSG00000027175	protein_coding	Tcp11l1	ENSMUST00000129792	retained_intron		2	-1	104712169	1768
ENSMUSG00000029442	protein_coding	Wdr66	ENSMUST00000125979	retained_intron		5	1	123302516	785
ENSMUSG00000049799	protein_coding	Lrrc19	ENSMUST00000053419	protein_coding	principal1	4	-1	94650144	2780
ENSMUSG00000029442	protein_coding	Wdr66	ENSMUST00000069311	protein_coding		5	1	123293901	978
ENSMUSG00000027175	protein_coding	Tcp11l1	ENSMUST00000137428	processed_transcript		2	-1	104706467	693
ENSMUSG00000027175	protein_coding	Tcp11l1	ENSMUST00000129571	processed_transcript		2	-1	104684266	424
ENSMUSG00000029442	protein_coding	Wdr66	ENSMUST00000163092	protein_coding		5	1	123271595	4009
ENSMUSG00000101912	lincRNA	1700052I22Rik	ENSMUST00000190431	lincRNA		12	-1	80924449	379
ENSMUSG00000029442	protein_coding	Wdr66	ENSMUST00000170536	protein_coding		5	1	123271595	3679
ENSMUSG00000024446	protein_coding	Rpp21	ENSMUST00000077535	protein_coding		17	-1	36257856	437
ENSMUSG00000027175	protein_coding	Tcp11l1	ENSMUST00000132600	processed_transcript		2	-1	104712166	630
ENSMUSG00000087063	antisense	Gm15857	ENSMUST00000133476	antisense		5	-1	123310324	789
ENSMUSG00000049799	protein_coding	Lrrc19	ENSMUST00000107101	protein_coding	principal1	4	-1	94650116	2820
ENSMUSG00000106212	sense_intronic	Gm43112	ENSMUST00000196665	sense_intronic		5	-1	4822627	3122
ENSMUSG00000024446	protein_coding	Rpp21	ENSMUST00000173486	retained_intron		17	-1	36257843	579
ENSMUSG00000106472	sense_intronic	Gm43111	ENSMUST00000197445	sense_intronic		5	-1	4870266	1919
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000123112	retained_intron		15	-1	76351110	1896
ENSMUSG00000026932	protein_coding	Nacc2	ENSMUST00000114159	protein_coding	principal1	2	-1	26092177	6675
ENSMUSG00000057719	protein_coding	Sh3rf2	ENSMUST00000132681	processed_transcript		18	1	42141897	836
ENSMUSG00000099898	protein_coding	Scgb1b17	ENSMUST00000187081	protein_coding	principal1	7	1	33063449	417
ENSMUSG00000027175	protein_coding	Tcp11l1	ENSMUST00000028597	protein_coding	principal1	2	-1	104712162	3512
ENSMUSG00000057719	protein_coding	Sh3rf2	ENSMUST00000128066	processed_transcript		18	1	42141985	527
ENSMUSG00000057719	protein_coding	Sh3rf2	ENSMUST00000237344	processed_transcript		18	1	42143033	686
ENSMUSG00000057719	protein_coding	Sh3rf2	ENSMUST00000236947	processed_transcript		18	1	42143433	1143
ENSMUSG00000027175	protein_coding	Tcp11l1	ENSMUST00000126310	processed_transcript		2	-1	104712093	636
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000147535	protein_coding		7	1	46841475	912
ENSMUSG00000026932	protein_coding	Nacc2	ENSMUST00000028300	protein_coding	principal1	2	-1	26122818	6378
ENSMUSG00000104198	TR_V_pseudogene	Trbv9	ENSMUST00000194494	TR_V_pseudogene		6	1	41087999	290
ENSMUSG00000036602	protein_coding	Alx1	ENSMUST00000217946	protein_coding		10	-1	103029064	1542
ENSMUSG00000026932	protein_coding	Nacc2	ENSMUST00000126921	processed_transcript		2	-1	26062490	906
ENSMUSG00000103833	sense_overlapping	Gm49885	ENSMUST00000191867	sense_overlapping		6	1	41081587	620
ENSMUSG00000091671	TR_V_pseudogene	Trbv10	ENSMUST00000168322	TR_V_pseudogene		6	1	41091940	289
ENSMUSG00000102821	TR_V_pseudogene	Trbv8	ENSMUST00000194020	TR_V_pseudogene		6	1	41084821	285
ENSMUSG00000020076	protein_coding	Ddx50	ENSMUST00000218304	protein_coding		10	-1	62621512	746
ENSMUSG00000026932	protein_coding	Nacc2	ENSMUST00000152133	processed_transcript		2	-1	26091819	1258
ENSMUSG00000102903	TR_V_pseudogene	Trbv11	ENSMUST00000194354	TR_V_pseudogene		6	1	41107044	260
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000114934	protein_coding		2	-1	6884996	5470
ENSMUSG00000036602	protein_coding	Alx1	ENSMUST00000167156	protein_coding	principal1	10	-1	103029054	2689
ENSMUSG00000026932	protein_coding	Nacc2	ENSMUST00000128674	processed_transcript		2	-1	26090375	628
ENSMUSG00000026932	protein_coding	Nacc2	ENSMUST00000133212	processed_transcript		2	-1	26123220	482
ENSMUSG00000036602	protein_coding	Alx1	ENSMUST00000164226	processed_transcript		10	-1	103022574	1613
ENSMUSG00000024446	protein_coding	Rpp21	ENSMUST00000025319	protein_coding	principal1	17	-1	36258069	729
ENSMUSG00000036602	protein_coding	Alx1	ENSMUST00000218681	nonsense_mediated_decay		10	-1	103028627	1702
ENSMUSG00000026932	protein_coding	Nacc2	ENSMUST00000140993	protein_coding		2	-1	26122783	411
ENSMUSG00000087220	lincRNA	Gm11377	ENSMUST00000131539	lincRNA		13	1	31564749	670
ENSMUSG00000036602	protein_coding	Alx1	ENSMUST00000219194	protein_coding	principal1	10	-1	103029116	1695
ENSMUSG00000026932	protein_coding	Nacc2	ENSMUST00000149408	processed_transcript		2	-1	26122788	351
ENSMUSG00000024446	protein_coding	Rpp21	ENSMUST00000173122	retained_intron		17	-1	36256350	533
ENSMUSG00000036602	protein_coding	Alx1	ENSMUST00000218282	protein_coding	principal1	10	-1	103030215	2012
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000213897	nonsense_mediated_decay		10	-1	30655791	1239
ENSMUSG00000024446	protein_coding	Rpp21	ENSMUST00000172573	nonsense_mediated_decay		17	-1	36257610	330
ENSMUSG00000087515	antisense	Gm13554	ENSMUST00000137349	antisense		2	1	26059010	477
ENSMUSG00000026482	protein_coding	Rgl1	ENSMUST00000111859	protein_coding	alternative1	1	-1	152766305	5092
ENSMUSG00000036602	protein_coding	Alx1	ENSMUST00000218508	retained_intron		10	-1	103024215	2284
ENSMUSG00000006948	protein_coding	Klk4	ENSMUST00000007161	protein_coding	principal1	7	1	43881160	1249
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000183209	protein_coding		2	-1	7081302	3852
ENSMUSG00000082963	processed_pseudogene	Gm12465	ENSMUST00000118591	processed_pseudogene		4	-1	52077467	300
ENSMUSG00000024446	protein_coding	Rpp21	ENSMUST00000174824	retained_intron		17	-1	36257855	464
ENSMUSG00000083539	processed_pseudogene	Gm12466	ENSMUST00000121199	processed_pseudogene		4	1	52240903	620
ENSMUSG00000036602	protein_coding	Alx1	ENSMUST00000040859	protein_coding	principal1	10	-1	103028777	2493
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000182851	protein_coding	alternative2	2	-1	6884947	3587
ENSMUSG00000082267	processed_pseudogene	Gm12467	ENSMUST00000117625	processed_pseudogene		4	1	52241712	745
ENSMUSG00000063415	protein_coding	Cyp26b1	ENSMUST00000205228	protein_coding		6	-1	84587680	4288
ENSMUSG00000041560	protein_coding	Nop53	ENSMUST00000044158	protein_coding	principal1	7	-1	15946074	3176
ENSMUSG00000083338	processed_pseudogene	Gm12475	ENSMUST00000119476	processed_pseudogene		4	-1	52362211	1389
ENSMUSG00000112880	bidirectional_promoter_lncRNA	Gm20337	ENSMUST00000219062	bidirectional_promoter_lncRNA		12	-1	80945396	1118
ENSMUSG00000038408	lincRNA	1700018A04Rik	ENSMUST00000150418	lincRNA		13	-1	31582505	706
ENSMUSG00000090638	lincRNA	Gm17028	ENSMUST00000170026	lincRNA		10	-1	103030344	704
ENSMUSG00000038408	lincRNA	1700018A04Rik	ENSMUST00000126138	lincRNA		13	-1	31582513	594
ENSMUSG00000020802	protein_coding	Ube2o	ENSMUST00000082152	protein_coding	principal1	11	-1	116581447	5205
ENSMUSG00000038408	lincRNA	1700018A04Rik	ENSMUST00000221561	lincRNA		13	-1	31625509	2569
ENSMUSG00000085763	antisense	Smc2os	ENSMUST00000141473	antisense		4	-1	52438965	626
ENSMUSG00000038408	lincRNA	1700018A04Rik	ENSMUST00000140980	lincRNA		13	-1	31582513	1512
ENSMUSG00000038408	lincRNA	1700018A04Rik	ENSMUST00000221582	lincRNA		13	-1	31625792	1525
ENSMUSG00000026482	protein_coding	Rgl1	ENSMUST00000027760	protein_coding	principal2	1	-1	152625217	4572
ENSMUSG00000087276	lincRNA	Gm11378	ENSMUST00000130966	lincRNA		13	1	31619168	229
ENSMUSG00000095574	TR_V_gene	Trbv12-1	ENSMUST00000103267	TR_V_gene	principal1	6	1	41113550	389
ENSMUSG00000026482	protein_coding	Rgl1	ENSMUST00000111857	protein_coding	alternative1	1	-1	152766351	3037
ENSMUSG00000020802	protein_coding	Ube2o	ENSMUST00000134102	processed_transcript		11	-1	116544017	3550
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000155861	protein_coding		8	1	25601601	2834
ENSMUSG00000034339	processed_pseudogene	Cstdc7	ENSMUST00000041389	processed_pseudogene		18	1	42173370	294
ENSMUSG00000026482	protein_coding	Rgl1	ENSMUST00000188395	retained_intron		1	-1	152553044	1537
ENSMUSG00000046719	protein_coding	Nxph3	ENSMUST00000058866	protein_coding	principal1	11	-1	95514570	2099
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000182879	protein_coding		2	-1	6721615	2223
ENSMUSG00000020802	protein_coding	Ube2o	ENSMUST00000147851	processed_transcript		11	-1	116548841	461
ENSMUSG00000068082	protein_coding	Grxcr1	ENSMUST00000094715	protein_coding	principal1	5	1	68031835	1071
ENSMUSG00000083314	processed_pseudogene	Gm11742	ENSMUST00000119903	processed_pseudogene		11	1	116550418	233
ENSMUSG00000076467	TR_V_gene	Trbv13-1	ENSMUST00000194399	TR_V_gene	principal5	6	1	41116007	366
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000182706	protein_coding		2	-1	7081242	2525
ENSMUSG00000076467	TR_V_gene	Trbv13-1	ENSMUST00000103268	TR_V_gene	alternative2	6	1	41116036	334
ENSMUSG00000106747	TEC	Gm43025	ENSMUST00000201764	TEC		5	-1	68084374	1886
ENSMUSG00000041560	protein_coding	Nop53	ENSMUST00000197477	retained_intron		7	-1	15945750	1793
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000114927	protein_coding	alternative1	2	-1	6721928	1721
ENSMUSG00000108444	transcribed_unprocessed_pseudogene	Klk2-ps	ENSMUST00000205342	transcribed_unprocessed_pseudogene		7	1	43916254	571
ENSMUSG00000108444	transcribed_unprocessed_pseudogene	Klk2-ps	ENSMUST00000206865	processed_transcript		7	1	43918057	2684
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000023211	protein_coding	principal1	15	-1	76351111	1734
ENSMUSG00000041560	protein_coding	Nop53	ENSMUST00000198688	processed_transcript		7	-1	15945801	1455
ENSMUSG00000105734	protein_coding	4930558C23Rik	ENSMUST00000196239	protein_coding	principal1	3	-1	95402841	731
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000043897	protein_coding	principal1	17	-1	25844851	3189
ENSMUSG00000081652	processed_pseudogene	Gm14283	ENSMUST00000119763	processed_pseudogene		2	-1	131415245	325
ENSMUSG00000026482	protein_coding	Rgl1	ENSMUST00000128251	processed_transcript		1	-1	152592759	409
ENSMUSG00000041560	protein_coding	Nop53	ENSMUST00000200455	processed_transcript		7	-1	15946055	444
ENSMUSG00000020076	protein_coding	Ddx50	ENSMUST00000020270	protein_coding	principal1	10	-1	62651218	2535
ENSMUSG00000026482	protein_coding	Rgl1	ENSMUST00000149536	nonsense_mediated_decay		1	-1	152625029	626
ENSMUSG00000096177	processed_pseudogene	Gm5070	ENSMUST00000177599	processed_pseudogene		3	-1	95411207	862
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000034240	protein_coding	principal4	8	-1	95142547	3277
ENSMUSG00000104646	processed_pseudogene	Gm9173	ENSMUST00000198054	processed_pseudogene		3	-1	95415425	400
ENSMUSG00000024870	protein_coding	Rab1b	ENSMUST00000025804	protein_coding	principal1	19	-1	5107072	1913
ENSMUSG00000099868	sense_intronic	Gm28792	ENSMUST00000191482	sense_intronic		1	-1	152751824	419
ENSMUSG00000111853	lincRNA	Gm31408	ENSMUST00000216695	lincRNA		9	1	31559609	1455
ENSMUSG00000110952	processed_pseudogene	Gm18226	ENSMUST00000215261	processed_pseudogene		9	-1	31568246	521
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000147001	retained_intron		15	-1	76348195	854
ENSMUSG00000116796	TEC	Gm49784	ENSMUST00000232626	TEC		17	-1	17594776	1094
ENSMUSG00000063415	protein_coding	Cyp26b1	ENSMUST00000204146	protein_coding	principal1	6	-1	84588638	4495
ENSMUSG00000024870	protein_coding	Rab1b	ENSMUST00000237438	protein_coding		19	-1	5106976	657
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000154477	retained_intron		15	-1	76351047	1905
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000136107	protein_coding		8	1	25602284	3818
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000177122	retained_intron		17	-1	25841148	1858
ENSMUSG00000055547	protein_coding	Apobec4	ENSMUST00000068875	protein_coding	principal1	1	1	152750551	1566
ENSMUSG00000024870	protein_coding	Rab1b	ENSMUST00000236149	protein_coding		19	-1	5107005	757
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000144816	retained_intron		15	-1	76351075	1669
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000048209	protein_coding	principal1	7	1	46845839	1588
ENSMUSG00000024870	protein_coding	Rab1b	ENSMUST00000237201	protein_coding		19	-1	5106245	826
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000159429	protein_coding		15	-1	76347684	418
ENSMUSG00000080950	processed_pseudogene	Gm7278	ENSMUST00000119836	processed_pseudogene		1	-1	152730559	1401
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000146919	protein_coding		8	1	25602284	3652
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000210815	protein_coding		7	1	46845841	1535
ENSMUSG00000020076	protein_coding	Ddx50	ENSMUST00000218372	processed_transcript		10	-1	62649753	2375
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000230016	processed_transcript		15	-1	76348169	478
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000160560	nonsense_mediated_decay		15	-1	76350750	835
ENSMUSG00000080051	processed_pseudogene	Gm14510	ENSMUST00000116165	processed_pseudogene		X	1	8959312	1092
ENSMUSG00000020076	protein_coding	Ddx50	ENSMUST00000217970	retained_intron		10	-1	62634506	4135
ENSMUSG00000063415	protein_coding	Cyp26b1	ENSMUST00000077705	protein_coding	principal1	6	-1	84593746	4157
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000152151	retained_intron		15	-1	76350691	819
ENSMUSG00000020076	protein_coding	Ddx50	ENSMUST00000219076	retained_intron		10	-1	62641164	558
ENSMUSG00000041231	protein_coding	Ublcp1	ENSMUST00000102795	protein_coding	principal1	11	-1	44470498	2088
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000137106	retained_intron		15	-1	76350682	835
ENSMUSG00000101399	protein_coding	Gm28961	ENSMUST00000190573	protein_coding	principal1	Y	1	57705697	923
ENSMUSG00000042165	protein_coding	Gm9774	ENSMUST00000192538	protein_coding	principal1	3	-1	92429423	1392
ENSMUSG00000020076	protein_coding	Ddx50	ENSMUST00000218158	retained_intron		10	-1	62651203	1500
ENSMUSG00000063415	protein_coding	Cyp26b1	ENSMUST00000168003	protein_coding	principal1	6	-1	84593908	4170
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000124696	retained_intron		7	1	46845843	625
ENSMUSG00000020076	protein_coding	Ddx50	ENSMUST00000220370	retained_intron		10	-1	62647781	584
ENSMUSG00000022552	protein_coding	Sharpin	ENSMUST00000133993	retained_intron		15	-1	76350712	1884
ENSMUSG00000026692	protein_coding	Fmo4	ENSMUST00000111525	protein_coding	principal1	1	-1	162813672	2683
ENSMUSG00000020076	protein_coding	Ddx50	ENSMUST00000218224	retained_intron		10	-1	62651173	2681
ENSMUSG00000111504	lincRNA	Gm48284	ENSMUST00000216936	lincRNA		9	-1	40616386	3079
ENSMUSG00000042165	protein_coding	Gm9774	ENSMUST00000047300	protein_coding		3	-1	92429423	1064
ENSMUSG00000036231	protein_coding	Agr3	ENSMUST00000042101	protein_coding	principal1	12	1	35925620	826
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000125862	protein_coding		7	1	46845843	406
ENSMUSG00000063415	protein_coding	Cyp26b1	ENSMUST00000204109	protein_coding		6	-1	84588005	1340
ENSMUSG00000110992	lincRNA	Gm35371	ENSMUST00000216204	lincRNA		9	-1	40669107	579
ENSMUSG00000110604	lincRNA	Gm45824	ENSMUST00000212236	lincRNA		8	-1	47766125	1004
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000209548	nonsense_mediated_decay		7	1	46845843	1277
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000142941	protein_coding	principal4	2	-1	6721613	2338
ENSMUSG00000041231	protein_coding	Ublcp1	ENSMUST00000151875	processed_transcript		11	-1	44458242	454
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000210968	protein_coding		7	1	46845856	399
ENSMUSG00000078208	protein_coding	Fthl17b	ENSMUST00000105006	protein_coding	principal1	X	-1	8962975	842
ENSMUSG00000036231	protein_coding	Agr3	ENSMUST00000154042	protein_coding		12	1	35925622	388
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000150624	protein_coding	alternative1	2	-1	6721613	2332
ENSMUSG00000047466	protein_coding	8030462N17Rik	ENSMUST00000074653	protein_coding	principal1	18	-1	77713933	5125
ENSMUSG00000026692	protein_coding	Fmo4	ENSMUST00000140031	retained_intron		1	-1	162813672	1774
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000183091	protein_coding		2	-1	6884946	2177
ENSMUSG00000026692	protein_coding	Fmo4	ENSMUST00000193508	retained_intron		1	-1	162808474	680
ENSMUSG00000047466	protein_coding	8030462N17Rik	ENSMUST00000237203	protein_coding	principal1	18	-1	77714486	1606
ENSMUSG00000094525	TR_V_gene	Trbv12-2	ENSMUST00000103269	TR_V_gene	principal1	6	1	41118851	385
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000092621	protein_coding		7	1	46845863	934
ENSMUSG00000026692	protein_coding	Fmo4	ENSMUST00000144916	protein_coding		1	-1	162813926	710
ENSMUSG00000041231	protein_coding	Ublcp1	ENSMUST00000129054	processed_transcript		11	-1	44460830	1398
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000169748	protein_coding	alternative2	8	-1	95142517	3384
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000210467	protein_coding		7	1	46845870	513
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000183984	nonsense_mediated_decay		2	-1	6872597	1996
ENSMUSG00000047466	protein_coding	8030462N17Rik	ENSMUST00000235641	retained_intron		18	-1	77713983	2571
ENSMUSG00000026692	protein_coding	Fmo4	ENSMUST00000140274	protein_coding		1	-1	162813972	702
ENSMUSG00000054215	protein_coding	Sprr2k	ENSMUST00000067102	protein_coding	principal1	3	1	92432582	637
ENSMUSG00000107289	processed_pseudogene	Gm43026	ENSMUST00000202972	processed_pseudogene		5	1	68277472	325
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000133062	protein_coding		7	1	46846097	579
ENSMUSG00000019992	protein_coding	Mtfr2	ENSMUST00000169712	protein_coding	principal1	10	1	20347770	1991
ENSMUSG00000041231	protein_coding	Ublcp1	ENSMUST00000136709	processed_transcript		11	-1	44464025	817
ENSMUSG00000097666	lincRNA	A330094K24Rik	ENSMUST00000180530	lincRNA		18	-1	77732739	1269
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000212656	retained_intron		8	-1	95102265	629
ENSMUSG00000041231	protein_coding	Ublcp1	ENSMUST00000156551	processed_transcript		11	-1	44461353	490
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000182355	processed_transcript		2	-1	6592800	1240
ENSMUSG00000106854	unprocessed_pseudogene	Gm42850	ENSMUST00000202094	unprocessed_pseudogene		5	-1	68594746	201
ENSMUSG00000026692	protein_coding	Fmo4	ENSMUST00000028014	protein_coding	principal1	1	-1	162812549	1787
ENSMUSG00000081020	processed_pseudogene	Gm14509	ENSMUST00000117312	processed_pseudogene		X	1	8971505	1286
ENSMUSG00000041231	protein_coding	Ublcp1	ENSMUST00000150032	processed_transcript		11	-1	44467074	368
ENSMUSG00000019992	protein_coding	Mtfr2	ENSMUST00000217608	protein_coding		10	1	20347819	652
ENSMUSG00000107117	TEC	Gm43842	ENSMUST00000202890	TEC		5	-1	68960389	2982
ENSMUSG00000090619	protein_coding	Vmn2r60	ENSMUST00000166447	protein_coding	alternative2	7	1	42107770	3071
ENSMUSG00000111702	unprocessed_pseudogene	Gm47945	ENSMUST00000214167	unprocessed_pseudogene		9	-1	37478643	191
ENSMUSG00000034460	protein_coding	Six4	ENSMUST00000043208	protein_coding	principal2	12	-1	73113425	6402
ENSMUSG00000090619	protein_coding	Vmn2r60	ENSMUST00000233771	protein_coding	principal2	7	1	42116269	3196
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000115451	protein_coding		5	-1	5266068	5145
ENSMUSG00000106070	lincRNA	Gm43135	ENSMUST00000196442	lincRNA		3	1	101691789	3462
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000168134	protein_coding	principal3	7	-1	144553729	5181
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000005051	protein_coding	principal1	7	1	46847131	1766
ENSMUSG00000090619	protein_coding	Vmn2r60	ENSMUST00000233266	processed_transcript		7	1	42125404	12956
ENSMUSG00000019992	protein_coding	Mtfr2	ENSMUST00000213374	processed_transcript		10	1	20348007	1577
ENSMUSG00000105642	lincRNA	Gm43134	ENSMUST00000199434	lincRNA		3	1	101748124	1886
ENSMUSG00000092257	processed_pseudogene	Gm2308	ENSMUST00000166539	processed_pseudogene		7	-1	42126203	1004
ENSMUSG00000034460	protein_coding	Six4	ENSMUST00000175693	protein_coding	alternative2	12	-1	73113456	6817
ENSMUSG00000108562	processed_pseudogene	Gm44519	ENSMUST00000206486	processed_pseudogene		7	-1	42256416	122
ENSMUSG00000059455	protein_coding	Plac8l1	ENSMUST00000081374	protein_coding	principal1	18	-1	42196686	732
ENSMUSG00000082036	processed_pseudogene	Gm13724	ENSMUST00000122395	processed_pseudogene		6	1	29960993	1155
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000132157	protein_coding		7	1	46847505	645
ENSMUSG00000081467	processed_pseudogene	Gm13337	ENSMUST00000119183	processed_pseudogene		2	1	22067826	1594
ENSMUSG00000101927	processed_pseudogene	Gm28992	ENSMUST00000190534	processed_pseudogene		7	-1	33102007	139
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000182982	retained_intron		7	-1	144489337	2055
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000210631	protein_coding		7	1	46847596	685
ENSMUSG00000059455	protein_coding	Plac8l1	ENSMUST00000236636	protein_coding		18	-1	42196709	486
ENSMUSG00000117660	processed_pseudogene	Gm18086	ENSMUST00000237209	processed_pseudogene		18	-1	42187772	669
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000182958	nonsense_mediated_decay		7	-1	144513274	3444
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000210198	retained_intron		7	1	46848987	740
ENSMUSG00000110539	lincRNA	Gm45864	ENSMUST00000211965	lincRNA		8	1	47773555	1019
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000213004	protein_coding	alternative2	8	-1	95113342	2453
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000182226	protein_coding	alternative1	7	-1	144552537	4829
ENSMUSG00000107401	processed_pseudogene	Gm6312	ENSMUST00000204060	processed_pseudogene		6	-1	82888709	1194
ENSMUSG00000076469	TR_V_gene	Trbv13-2	ENSMUST00000103270	TR_V_gene	principal1	6	1	41121396	340
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000207298	retained_intron		7	-1	144479118	804
ENSMUSG00000110464	lincRNA	1700061N14Rik	ENSMUST00000212295	lincRNA		8	-1	47818221	463
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000211854	retained_intron		8	-1	95104009	781
ENSMUSG00000075376	protein_coding	Rc3h2	ENSMUST00000112934	protein_coding	alternative1	2	-1	37422903	8948
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000183063	processed_transcript		7	-1	144486769	357
ENSMUSG00000090967	protein_coding	Vmn2r61	ENSMUST00000166131	protein_coding	principal1	7	1	42260053	2598
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000212787	protein_coding		8	-1	95110813	721
ENSMUSG00000101137	processed_pseudogene	Rpl23a-ps7	ENSMUST00000185437	processed_pseudogene		7	1	33102103	460
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000207471	retained_intron		7	-1	144487014	2782
ENSMUSG00000109076	lincRNA	Gm45145	ENSMUST00000208872	lincRNA		6	-1	82898100	958
ENSMUSG00000109076	lincRNA	Gm45145	ENSMUST00000207452	lincRNA		6	-1	82898100	918
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000212424	protein_coding		8	-1	95182791	598
ENSMUSG00000095766	processed_pseudogene	Gm21182	ENSMUST00000178899	processed_pseudogene		8	-1	20557486	794
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000183197	retained_intron		7	-1	144500562	405
ENSMUSG00000109076	lincRNA	Gm45145	ENSMUST00000208233	lincRNA		6	-1	82905214	345
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000182404	protein_coding		2	-1	7395893	1024
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000163336	protein_coding	principal1	14	1	32159865	4065
ENSMUSG00000092370	unprocessed_pseudogene	Vmn2r-ps58	ENSMUST00000173044	unprocessed_pseudogene		7	1	42303086	242
ENSMUSG00000095403	unprocessed_pseudogene	Gm21092	ENSMUST00000178995	unprocessed_pseudogene		8	1	20567597	955
ENSMUSG00000101487	unprocessed_pseudogene	Scgb2b33	ENSMUST00000187413	unprocessed_pseudogene		7	-1	33113458	334
ENSMUSG00000063229	protein_coding	Ldha	ENSMUST00000209984	protein_coding		7	1	46847082	1815
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000127751	processed_transcript		2	1	129592835	339
ENSMUSG00000102327	TR_V_pseudogene	Trbv12-3	ENSMUST00000192675	TR_V_pseudogene		6	1	41127592	372
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000183183	retained_intron		7	-1	144508973	928
ENSMUSG00000083472	processed_pseudogene	Gm13491	ENSMUST00000118267	processed_pseudogene		2	-1	51604348	235
ENSMUSG00000045409	protein_coding	Trim39	ENSMUST00000173665	nonsense_mediated_decay		17	-1	36268752	2974
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000228143	retained_intron		14	1	32159911	4733
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000182731	nonsense_mediated_decay		7	-1	144552362	696
ENSMUSG00000061974	protein_coding	Cldn24	ENSMUST00000079639	protein_coding	principal1	8	1	47822143	663
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000212554	protein_coding		8	-1	95142503	711
ENSMUSG00000023845	protein_coding	Lnpep	ENSMUST00000041047	protein_coding	principal1	17	-1	17625047	12052
ENSMUSG00000037519	protein_coding	Ppfia1	ENSMUST00000183106	retained_intron		7	-1	144524370	4088
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000212076	protein_coding		8	-1	95137922	630
ENSMUSG00000075376	protein_coding	Rc3h2	ENSMUST00000112936	protein_coding	principal3	2	-1	37422869	5828
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000212786	protein_coding		8	-1	95137898	359
ENSMUSG00000056115	protein_coding	Tas2r134	ENSMUST00000070028	protein_coding	principal1	2	1	51627511	898
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000136153	processed_transcript		2	1	129592839	521
ENSMUSG00000027176	protein_coding	Cstf3	ENSMUST00000028599	protein_coding	principal1	2	1	104590523	2817
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000139966	protein_coding	alternative2	8	1	25602284	5261
ENSMUSG00000031788	protein_coding	Kifc3	ENSMUST00000212842	protein_coding		8	-1	95202812	647
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000177470	retained_intron		17	-1	25844463	2912
ENSMUSG00000043648	protein_coding	Pld6	ENSMUST00000051493	processed_transcript		11	-1	59787645	1753
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000079158	protein_coding	principal1	16	-1	20426394	5811
ENSMUSG00000110428	antisense	Gm45812	ENSMUST00000212199	antisense		8	1	95126666	192
ENSMUSG00000091337	protein_coding	Eid1	ENSMUST00000164756	protein_coding	principal1	2	1	125673095	1691
ENSMUSG00000075376	protein_coding	Rc3h2	ENSMUST00000125619	nonsense_mediated_decay		2	-1	37422877	5754
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000176522	retained_intron		17	-1	25840599	937
ENSMUSG00000110517	antisense	Gm31224	ENSMUST00000212682	antisense		8	1	95113566	513
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000183269	retained_intron		2	-1	6721615	4798
ENSMUSG00000075376	protein_coding	Rc3h2	ENSMUST00000204959	retained_intron		2	-1	37377571	575
ENSMUSG00000085014	lincRNA	Gm13490	ENSMUST00000143870	lincRNA		2	-1	51732009	2409
ENSMUSG00000043648	protein_coding	Pld6	ENSMUST00000125307	protein_coding	principal1	11	-1	59787642	948
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000169722	protein_coding		14	1	32159938	1101
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000176882	processed_transcript		17	-1	25841662	744
ENSMUSG00000075376	protein_coding	Rc3h2	ENSMUST00000143826	retained_intron		2	-1	37381260	3083
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000148321	processed_transcript		2	-1	6616180	405
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000142395	protein_coding	principal2	8	1	25602284	10105
ENSMUSG00000075376	protein_coding	Rc3h2	ENSMUST00000205124	retained_intron		2	-1	37390197	2236
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000134413	retained_intron		16	-1	20335226	523
ENSMUSG00000098044	processed_pseudogene	Gm9162	ENSMUST00000182081	processed_pseudogene		7	1	33137119	991
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000168385	protein_coding		14	1	32159981	791
ENSMUSG00000075376	protein_coding	Rc3h2	ENSMUST00000204962	retained_intron		2	-1	37399588	2698
ENSMUSG00000100904	processed_pseudogene	Gm28559	ENSMUST00000190532	processed_pseudogene		7	-1	33165112	139
ENSMUSG00000027176	protein_coding	Cstf3	ENSMUST00000137961	retained_intron		2	1	104590618	644
ENSMUSG00000101427	processed_pseudogene	Gm6003	ENSMUST00000187903	processed_pseudogene		7	1	33165208	463
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000143445	protein_coding		8	1	25602319	2416
ENSMUSG00000075376	protein_coding	Rc3h2	ENSMUST00000124218	processed_transcript		2	-1	37414735	513
ENSMUSG00000055193	protein_coding	Klk15	ENSMUST00000068625	protein_coding	principal1	7	1	43933740	845
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000141781	retained_intron		8	1	25674436	2555
ENSMUSG00000075376	protein_coding	Rc3h2	ENSMUST00000204690	retained_intron		2	-1	37417010	3479
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000148003	processed_transcript		16	-1	20364006	338
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000177062	retained_intron		17	-1	25842054	500
ENSMUSG00000055193	protein_coding	Klk15	ENSMUST00000206955	protein_coding		7	1	43933793	559
ENSMUSG00000100058	protein_coding	Scgb2b18	ENSMUST00000186529	protein_coding	principal1	7	-1	33173864	523
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000168334	nonsense_mediated_decay		14	1	32165589	4032
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000137985	retained_intron		16	-1	20364200	618
ENSMUSG00000020528	protein_coding	Prpsap2	ENSMUST00000151966	processed_transcript		11	-1	61762012	1734
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000153597	protein_coding		8	1	25694133	1865
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000127582	retained_intron		16	-1	20376642	705
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000030763	protein_coding	principal1	5	-1	5380197	4851
ENSMUSG00000075376	protein_coding	Rc3h2	ENSMUST00000100143	protein_coding	principal3	2	-1	37414821	8799
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000138347	processed_transcript		2	-1	6884628	923
ENSMUSG00000039616	protein_coding	Mocos	ENSMUST00000068006	protein_coding	principal1	18	1	24653691	2903
ENSMUSG00000101401	protein_coding	Scgb1b18	ENSMUST00000191255	protein_coding	principal1	7	1	33185568	402
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000176857	retained_intron		17	-1	25843137	815
ENSMUSG00000023938	protein_coding	Aars2	ENSMUST00000024733	protein_coding	principal1	17	1	45506841	3349
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000115450	protein_coding		5	-1	5265309	2386
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000150340	retained_intron		16	-1	20396403	979
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000176602	retained_intron		17	-1	25842106	556
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000115452	protein_coding		5	-1	5266165	1567
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000129959	retained_intron		8	1	25698528	2233
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000147935	retained_intron		8	1	25699958	600
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000199623	retained_intron		5	-1	4888912	3419
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000137733	protein_coding		2	-1	7396198	630
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000232044	nonsense_mediated_decay		16	-1	20398948	1094
ENSMUSG00000096467	protein_coding	Scgb2b19	ENSMUST00000179688	protein_coding	principal1	7	-1	33280338	520
ENSMUSG00000027176	protein_coding	Cstf3	ENSMUST00000122900	retained_intron		2	1	104590532	2589
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000077867	protein_coding		16	-1	20425986	1728
ENSMUSG00000023938	protein_coding	Aars2	ENSMUST00000233523	retained_intron		17	1	45514229	791
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000182560	retained_intron		2	-1	6884892	4802
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000111994	protein_coding	principal1	14	1	32165791	3343
ENSMUSG00000027176	protein_coding	Cstf3	ENSMUST00000124944	processed_transcript		2	1	104655540	626
ENSMUSG00000023938	protein_coding	Aars2	ENSMUST00000233391	retained_intron		17	1	45515427	467
ENSMUSG00000052632	protein_coding	Asap2	ENSMUST00000064595	protein_coding	principal4	12	1	21111748	5678
ENSMUSG00000054823	protein_coding	Nsd3	ENSMUST00000084026	protein_coding	principal2	8	1	25640284	9945
ENSMUSG00000039616	protein_coding	Mocos	ENSMUST00000234253	processed_transcript		18	1	24653878	2498
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000126742	retained_intron		2	-1	6722216	2075
ENSMUSG00000027176	protein_coding	Cstf3	ENSMUST00000131761	processed_transcript		2	1	104663138	421
ENSMUSG00000007030	protein_coding	Vwa7	ENSMUST00000007245	protein_coding	principal3	17	1	35016579	4313
ENSMUSG00000110088	TEC	Gm45343	ENSMUST00000210452	TEC		8	1	25687369	828
ENSMUSG00000083961	processed_pseudogene	Gm13725	ENSMUST00000122139	processed_pseudogene		6	1	29963644	207
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000123142	protein_coding		2	-1	6871972	402
ENSMUSG00000027176	protein_coding	Cstf3	ENSMUST00000126539	processed_transcript		2	1	104663666	582
ENSMUSG00000109679	TEC	Gm45342	ENSMUST00000210903	TEC		8	1	25692146	1363
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000128978	retained_intron		16	-1	20400286	799
ENSMUSG00000007030	protein_coding	Vwa7	ENSMUST00000172499	protein_coding	alternative2	17	1	35016638	3970
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000182523	retained_intron		2	-1	6884892	4143
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000114923	protein_coding		2	-1	7081207	529
ENSMUSG00000023938	protein_coding	Aars2	ENSMUST00000232693	retained_intron		17	1	45515618	2956
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000168114	protein_coding		14	1	32165792	375
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000182657	protein_coding		2	-1	6722209	331
ENSMUSG00000063133	protein_coding	Klk1b1	ENSMUST00000078835	protein_coding	principal1	7	1	43966751	867
ENSMUSG00000094204	protein_coding	Gm21915	ENSMUST00000177787	protein_coding	principal1	9	1	40670613	402
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000168034	protein_coding		14	1	32165792	451
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000182749	processed_transcript		2	-1	7081313	1967
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000134962	retained_intron		16	-1	20426324	4526
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000164341	protein_coding		14	1	32166121	462
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000182037	processed_transcript		2	-1	7509563	769
ENSMUSG00000052632	protein_coding	Asap2	ENSMUST00000101562	protein_coding	alternative2	12	1	21111748	5552
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000226479	nonsense_mediated_decay		14	1	32170745	443
ENSMUSG00000052632	protein_coding	Asap2	ENSMUST00000090834	protein_coding		12	1	21111756	5097
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000227498	processed_transcript		14	1	32170749	294
ENSMUSG00000038064	protein_coding	Cldn22	ENSMUST00000038693	protein_coding	principal1	8	1	47824482	995
ENSMUSG00000026197	protein_coding	Zfand2b	ENSMUST00000162768	protein_coding		1	1	75168646	735
ENSMUSG00000003135	protein_coding	Cnot11	ENSMUST00000161515	protein_coding	principal1	1	1	39534992	3482
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000227112	processed_transcript		14	1	32170858	268
ENSMUSG00000056234	protein_coding	Ncoa4	ENSMUST00000228779	retained_intron		14	1	32176732	661
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000133465	retained_intron		5	-1	5265982	3446
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000170438	protein_coding		2	-1	6884996	8856
ENSMUSG00000003135	protein_coding	Cnot11	ENSMUST00000160145	retained_intron		1	1	39538245	2097
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000156660	processed_transcript		5	-1	5036516	631
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000096199	protein_coding		16	-1	20426354	1136
ENSMUSG00000023845	protein_coding	Lnpep	ENSMUST00000231515	processed_transcript		17	-1	17578694	2720
ENSMUSG00000003135	protein_coding	Cnot11	ENSMUST00000195567	protein_coding		1	1	39540034	635
ENSMUSG00000036185	protein_coding	Sapcd1	ENSMUST00000173211	retained_intron		17	-1	35027659	618
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000134867	retained_intron		5	-1	5380224	3122
ENSMUSG00000023845	protein_coding	Lnpep	ENSMUST00000232462	retained_intron		17	-1	17624489	2864
ENSMUSG00000003135	protein_coding	Cnot11	ENSMUST00000003219	protein_coding	principal1	1	1	39535802	3162
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000175790	retained_intron		17	-1	25844306	777
ENSMUSG00000003872	protein_coding	Lin7b	ENSMUST00000210865	nonsense_mediated_decay		7	-1	45369233	388
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000231522	processed_transcript		16	-1	20426353	517
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000132390	retained_intron		5	-1	5380251	2296
ENSMUSG00000023845	protein_coding	Lnpep	ENSMUST00000232515	retained_intron		17	-1	17624641	2708
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000114924	protein_coding		2	-1	6884996	8738
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000153331	retained_intron		5	-1	5380193	4150
ENSMUSG00000023845	protein_coding	Lnpep	ENSMUST00000231291	processed_transcript		17	-1	17575559	655
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000171119	processed_transcript		5	-1	5195355	194
ENSMUSG00000063089	protein_coding	Klk1b8	ENSMUST00000072204	protein_coding	principal1	7	1	43950664	859
ENSMUSG00000022822	protein_coding	Abcc5	ENSMUST00000115547	protein_coding	principal1	16	-1	20426335	5372
ENSMUSG00000023845	protein_coding	Lnpep	ENSMUST00000231666	retained_intron		17	-1	17625050	2472
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000176583	retained_intron		17	-1	25843143	634
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000131392	protein_coding		5	-1	5266292	559
ENSMUSG00000002107	protein_coding	Celf2	ENSMUST00000100429	protein_coding	alternative1	2	-1	6721615	7491
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000176604	retained_intron		17	-1	25844318	747
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000167567	protein_coding		5	-1	5420312	534
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000176591	protein_coding		17	-1	25844417	515
ENSMUSG00000108651	unprocessed_pseudogene	Klk1b2-ps	ENSMUST00000206099	unprocessed_pseudogene		7	1	43958822	786
ENSMUSG00000052632	protein_coding	Asap2	ENSMUST00000050990	protein_coding	alternative2	12	1	21111954	3345
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000137554	processed_transcript		5	-1	5266303	510
ENSMUSG00000075538	sense_intronic	Gm10855	ENSMUST00000100426	sense_intronic		2	-1	6935081	2541
ENSMUSG00000028926	protein_coding	Cdk14	ENSMUST00000200637	processed_transcript		5	-1	5380193	381
ENSMUSG00000105864	sense_intronic	Gm10484	ENSMUST00000196372	sense_intronic		5	-1	5175152	4759
ENSMUSG00000104867	sense_intronic	Gm43728	ENSMUST00000198817	sense_intronic		5	-1	5311623	2622
ENSMUSG00000106054	processed_transcript	Gm43623	ENSMUST00000199289	processed_transcript		5	-1	5140107	2663
ENSMUSG00000092373	processed_transcript	Gm20535	ENSMUST00000173157	processed_transcript		12	-1	21255952	1268
ENSMUSG00000036185	protein_coding	Sapcd1	ENSMUST00000174037	nonsense_mediated_decay		17	-1	35027914	665
ENSMUSG00000106202	sense_intronic	Gm43727	ENSMUST00000198021	sense_intronic		5	-1	5307002	2647
ENSMUSG00000026197	protein_coding	Zfand2b	ENSMUST00000161106	retained_intron		1	1	75168646	1285
ENSMUSG00000040601	protein_coding	Nlrp4a	ENSMUST00000068767	protein_coding	principal2	7	1	26435113	4259
ENSMUSG00000105287	sense_intronic	Gm43577	ENSMUST00000197090	sense_intronic		5	-1	5157914	3344
ENSMUSG00000060161	transcribed_unprocessed_pseudogene	Klk1b7-ps	ENSMUST00000183762	transcribed_unprocessed_pseudogene		7	1	43942662	619
ENSMUSG00000026011	protein_coding	Ctla4	ENSMUST00000124816	processed_transcript		1	1	60887000	691
ENSMUSG00000105062	sense_intronic	Gm43113	ENSMUST00000199713	sense_intronic		5	-1	4828093	1754
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000221711	protein_coding		12	1	21285391	416
ENSMUSG00000060161	transcribed_unprocessed_pseudogene	Klk1b7-ps	ENSMUST00000078897	processed_transcript		7	1	43945012	448
ENSMUSG00000040601	protein_coding	Nlrp4a	ENSMUST00000119386	protein_coding	principal2	7	1	26435614	3215
ENSMUSG00000030838	protein_coding	Ush1c	ENSMUST00000078680	protein_coding	alternative2	7	-1	46238492	2047
ENSMUSG00000035109	protein_coding	Shc4	ENSMUST00000042246	protein_coding	principal1	2	-1	125723387	4059
ENSMUSG00000108323	unprocessed_pseudogene	Gm44945	ENSMUST00000206764	unprocessed_pseudogene		7	-1	43948893	1187
ENSMUSG00000040601	protein_coding	Nlrp4a	ENSMUST00000146534	processed_transcript		7	1	26435646	2220
ENSMUSG00000040601	protein_coding	Nlrp4a	ENSMUST00000146907	protein_coding	alternative2	7	1	26435646	3479
ENSMUSG00000099541	protein_coding	Gm21488	ENSMUST00000188744	protein_coding	principal1	Y	-1	27521920	923
ENSMUSG00000079108	protein_coding	Srp54c	ENSMUST00000218879	protein_coding	principal1	12	1	55230168	3642
ENSMUSG00000035109	protein_coding	Shc4	ENSMUST00000110480	protein_coding		2	-1	125673632	3671
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000177347	retained_intron		17	-1	25844446	532
ENSMUSG00000079108	protein_coding	Srp54c	ENSMUST00000164243	protein_coding	principal1	12	1	55239326	2317
ENSMUSG00000003872	protein_coding	Lin7b	ENSMUST00000003971	protein_coding	principal1	7	-1	45370583	735
ENSMUSG00000087595	lincRNA	1810012K08Rik	ENSMUST00000155199	lincRNA		2	1	26138546	574
ENSMUSG00000035109	protein_coding	Shc4	ENSMUST00000110477	protein_coding		2	-1	125673502	1988
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000176709	protein_coding		17	-1	25844525	452
ENSMUSG00000101920	lincRNA	Gm28454	ENSMUST00000190183	lincRNA		Y	-1	27583985	1495
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000175869	processed_transcript		17	-1	25844569	348
ENSMUSG00000035109	protein_coding	Shc4	ENSMUST00000157002	retained_intron		2	-1	125724148	4343
ENSMUSG00000036185	protein_coding	Sapcd1	ENSMUST00000040151	protein_coding	principal1	17	-1	35028016	935
ENSMUSG00000003872	protein_coding	Lin7b	ENSMUST00000211416	retained_intron		7	-1	45368602	405
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000177315	processed_transcript		17	-1	25844542	423
ENSMUSG00000036185	protein_coding	Sapcd1	ENSMUST00000174117	nonsense_mediated_decay		17	-1	35028016	651
ENSMUSG00000003872	protein_coding	Lin7b	ENSMUST00000210216	retained_intron		7	-1	45370315	402
ENSMUSG00000101920	lincRNA	Gm28454	ENSMUST00000189111	lincRNA		Y	-1	27583533	615
ENSMUSG00000101920	lincRNA	Gm28454	ENSMUST00000186901	lincRNA		Y	-1	27583533	431
ENSMUSG00000087679	protein_coding	Tmem250-ps	ENSMUST00000133808	protein_coding	principal1	2	-1	26140521	2483
ENSMUSG00000087679	protein_coding	Tmem250-ps	ENSMUST00000163836	protein_coding	principal1	2	-1	26138802	420
ENSMUSG00000003872	protein_coding	Lin7b	ENSMUST00000209756	retained_intron		7	-1	45370185	358
ENSMUSG00000083671	processed_pseudogene	Gm14304	ENSMUST00000117272	processed_pseudogene		2	-1	131454640	446
ENSMUSG00000021208	protein_coding	Ifi27l2b	ENSMUST00000044687	protein_coding	principal1	12	-1	103457223	1093
ENSMUSG00000025733	protein_coding	Rhot2	ENSMUST00000176247	retained_intron		17	-1	25844530	482
ENSMUSG00000099430	lincRNA	Gm28878	ENSMUST00000188272	lincRNA		Y	1	27616996	2167
ENSMUSG00000094103	protein_coding	Fam177a2	ENSMUST00000177978	protein_coding	principal1	12	1	55199592	3863
ENSMUSG00000097532	transcribed_unprocessed_pseudogene	Gm4349	ENSMUST00000181809	processed_transcript		3	1	95427671	2559
ENSMUSG00000097532	transcribed_unprocessed_pseudogene	Gm4349	ENSMUST00000238767	transcribed_unprocessed_pseudogene		3	1	95428563	412
ENSMUSG00000100099	unprocessed_pseudogene	Gm28879	ENSMUST00000190973	unprocessed_pseudogene		Y	1	27626234	696
ENSMUSG00000003872	protein_coding	Lin7b	ENSMUST00000209226	retained_intron		7	-1	45370346	644
ENSMUSG00000111153	processed_pseudogene	Gm18820	ENSMUST00000217424	processed_pseudogene		9	1	31643770	916
ENSMUSG00000100495	unprocessed_pseudogene	Gm29369	ENSMUST00000190674	unprocessed_pseudogene		Y	1	27663126	615
ENSMUSG00000095948	protein_coding	Gm21708	ENSMUST00000190283	protein_coding	principal1	Y	-1	3410148	1708
ENSMUSG00000112690	unprocessed_pseudogene	Gm2446	ENSMUST00000220144	unprocessed_pseudogene		12	-1	55229960	847
ENSMUSG00000110853	lincRNA	Gm47436	ENSMUST00000217207	lincRNA		9	-1	31678026	740
ENSMUSG00000114160	processed_pseudogene	Gm48352	ENSMUST00000222561	processed_pseudogene		12	1	55227514	405
ENSMUSG00000100413	unprocessed_pseudogene	Gm21506	ENSMUST00000190786	unprocessed_pseudogene		Y	1	27692628	696
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000215740	protein_coding		10	-1	30771941	7043
ENSMUSG00000110778	processed_pseudogene	Gm8171	ENSMUST00000217443	processed_pseudogene		9	1	31782984	720
ENSMUSG00000095948	protein_coding	Gm21708	ENSMUST00000188091	protein_coding	principal1	Y	-1	3410167	1573
ENSMUSG00000095948	protein_coding	Gm21708	ENSMUST00000180310	protein_coding	principal1	Y	-1	3407067	1143
ENSMUSG00000023074	protein_coding	Mospd1	ENSMUST00000152743	nonsense_mediated_decay		X	-1	53370502	1782
ENSMUSG00000059042	protein_coding	Klk1b9	ENSMUST00000081399	protein_coding	principal1	7	1	43976061	870
ENSMUSG00000040950	protein_coding	Mgl2	ENSMUST00000041550	protein_coding	principal2	11	1	70130329	1586
ENSMUSG00000108746	unprocessed_pseudogene	Gm45198	ENSMUST00000206796	unprocessed_pseudogene		7	-1	43974288	591
ENSMUSG00000079017	protein_coding	Ifi27l2a	ENSMUST00000055071	protein_coding	principal1	12	-1	103443680	463
ENSMUSG00000000120	protein_coding	Ngfr	ENSMUST00000000122	protein_coding	principal1	11	-1	95587735	3446
ENSMUSG00000023074	protein_coding	Mospd1	ENSMUST00000096447	protein_coding	alternative1	X	-1	53370502	1773
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000213889	retained_intron		10	-1	30655767	3850
ENSMUSG00000108432	antisense	Gm44756	ENSMUST00000206172	antisense		7	-1	43976573	1069
ENSMUSG00000040950	protein_coding	Mgl2	ENSMUST00000132645	processed_transcript		11	1	70130410	359
ENSMUSG00000040950	protein_coding	Mgl2	ENSMUST00000165951	protein_coding	alternative2	11	1	70130424	1635
ENSMUSG00000026197	protein_coding	Zfand2b	ENSMUST00000160439	protein_coding	principal1	1	1	75168646	1206
ENSMUSG00000040950	protein_coding	Mgl2	ENSMUST00000147502	processed_transcript		11	1	70134094	634
ENSMUSG00000093987	protein_coding	Gm21704	ENSMUST00000187277	protein_coding	principal1	Y	-1	3378783	1576
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000092610	protein_coding		10	-1	30655783	2590
ENSMUSG00000040950	protein_coding	Mgl2	ENSMUST00000108584	protein_coding		11	1	70134173	1307
ENSMUSG00000023074	protein_coding	Mospd1	ENSMUST00000023836	protein_coding	principal3	X	-1	53370502	1763
ENSMUSG00000093987	protein_coding	Gm21704	ENSMUST00000169382	protein_coding	principal1	Y	-1	3410167	1573
ENSMUSG00000081484	processed_pseudogene	Gm13492	ENSMUST00000119772	processed_pseudogene		2	-1	51818569	665
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000221507	protein_coding		12	1	21285525	724
ENSMUSG00000100285	processed_pseudogene	Gm21147	ENSMUST00000186046	processed_pseudogene		Y	-1	3384035	913
ENSMUSG00000111801	processed_pseudogene	Gm48288	ENSMUST00000215757	processed_pseudogene		9	-1	40680407	538
ENSMUSG00000084093	processed_pseudogene	Gm16418	ENSMUST00000118577	processed_pseudogene		1	-1	166431875	171
ENSMUSG00000026197	protein_coding	Zfand2b	ENSMUST00000027394	protein_coding	principal1	1	1	75168655	1316
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000222474	protein_coding		12	1	21285973	336
ENSMUSG00000087701	processed_pseudogene	Gm13493	ENSMUST00000120318	processed_pseudogene		2	-1	51871618	493
ENSMUSG00000024694	protein_coding	Keg1	ENSMUST00000025598	protein_coding	principal1	19	1	12695786	1676
ENSMUSG00000043885	protein_coding	Slc36a4	ENSMUST00000115588	protein_coding	alternative2	9	1	15709738	1745
ENSMUSG00000104194	TEC	Gm33354	ENSMUST00000195448	TEC		1	-1	166449157	906
ENSMUSG00000026197	protein_coding	Zfand2b	ENSMUST00000161657	retained_intron		1	1	75168658	882
ENSMUSG00000026197	protein_coding	Zfand2b	ENSMUST00000160903	retained_intron		1	1	75168666	620
ENSMUSG00000045409	protein_coding	Trim39	ENSMUST00000113706	protein_coding	principal1	17	-1	36271567	3204
ENSMUSG00000026197	protein_coding	Zfand2b	ENSMUST00000160033	retained_intron		1	1	75168701	665
ENSMUSG00000091586	protein_coding	Cyp4f17	ENSMUST00000237003	protein_coding	principal1	17	1	32506050	2940
ENSMUSG00000026197	protein_coding	Zfand2b	ENSMUST00000160282	retained_intron		1	1	75168778	829
ENSMUSG00000026011	protein_coding	Ctla4	ENSMUST00000027164	protein_coding	principal1	1	1	60909025	1933
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000216172	protein_coding	principal1	10	-1	30655867	2026
ENSMUSG00000026197	protein_coding	Zfand2b	ENSMUST00000186227	protein_coding		1	1	75168928	775
ENSMUSG00000026311	protein_coding	Asb1	ENSMUST00000086843	protein_coding	principal1	1	1	91540544	2490
ENSMUSG00000024694	protein_coding	Keg1	ENSMUST00000152017	processed_transcript		19	1	12695787	594
ENSMUSG00000045409	protein_coding	Trim39	ENSMUST00000042717	protein_coding	principal1	17	-1	36272004	3085
ENSMUSG00000032033	protein_coding	Barx2	ENSMUST00000116615	protein_coding	principal1	9	-1	31913462	1968
ENSMUSG00000091586	protein_coding	Cyp4f17	ENSMUST00000235238	protein_coding		17	1	32506462	650
ENSMUSG00000026011	protein_coding	Ctla4	ENSMUST00000097720	protein_coding		1	1	60909171	614
ENSMUSG00000043885	protein_coding	Slc36a4	ENSMUST00000061568	protein_coding	principal2	9	1	15709739	6539
ENSMUSG00000091586	protein_coding	Cyp4f17	ENSMUST00000236129	processed_transcript		17	1	32506518	401
ENSMUSG00000045409	protein_coding	Trim39	ENSMUST00000173369	protein_coding		17	-1	36269220	2914
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000217644	protein_coding		10	-1	30655837	2256
ENSMUSG00000023949	protein_coding	Tcte1	ENSMUST00000233588	protein_coding	principal1	17	1	45533053	2885
ENSMUSG00000081382	processed_pseudogene	Rpl18-ps1	ENSMUST00000121555	processed_pseudogene		1	1	60900898	525
ENSMUSG00000091586	protein_coding	Cyp4f17	ENSMUST00000165999	protein_coding	principal1	17	1	32506462	1693
ENSMUSG00000026311	protein_coding	Asb1	ENSMUST00000185718	processed_transcript		1	1	91540567	368
ENSMUSG00000024694	protein_coding	Keg1	ENSMUST00000123407	retained_intron		19	1	12695793	3041
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000217138	protein_coding		10	-1	30655836	2192
ENSMUSG00000045409	protein_coding	Trim39	ENSMUST00000174197	processed_transcript		17	-1	36268695	633
ENSMUSG00000043885	protein_coding	Slc36a4	ENSMUST00000214954	nonsense_mediated_decay		9	1	15726888	855
ENSMUSG00000020528	protein_coding	Prpsap2	ENSMUST00000004955	protein_coding	principal1	11	-1	61762062	1837
ENSMUSG00000023949	protein_coding	Tcte1	ENSMUST00000113547	protein_coding	principal1	17	1	45523434	3074
ENSMUSG00000045409	protein_coding	Trim39	ENSMUST00000113704	processed_transcript		17	-1	36271383	1465
ENSMUSG00000110813	antisense	Gm31497	ENSMUST00000216981	antisense		9	1	31905993	638
ENSMUSG00000024694	protein_coding	Keg1	ENSMUST00000138545	protein_coding		19	1	12695793	744
ENSMUSG00000038274	protein_coding	Fau	ENSMUST00000178310	protein_coding	principal1	19	1	6057844	613
ENSMUSG00000045409	protein_coding	Trim39	ENSMUST00000172832	retained_intron		17	-1	36272247	4718
ENSMUSG00000087393	lincRNA	1700023C21Rik	ENSMUST00000143247	lincRNA		11	1	109845878	389
ENSMUSG00000026311	protein_coding	Asb1	ENSMUST00000027538	protein_coding		1	1	91540714	5826
ENSMUSG00000020528	protein_coding	Prpsap2	ENSMUST00000123575	processed_transcript		11	-1	61762040	482
ENSMUSG00000041762	protein_coding	Gpr155	ENSMUST00000076463	protein_coding	principal3	2	-1	73386572	5061
ENSMUSG00000024694	protein_coding	Keg1	ENSMUST00000128987	retained_intron		19	1	12695804	1856
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000153491	protein_coding		2	1	129592839	720
ENSMUSG00000038274	protein_coding	Fau	ENSMUST00000237859	protein_coding		19	1	6057942	450
ENSMUSG00000026311	protein_coding	Asb1	ENSMUST00000190484	protein_coding		1	1	91540732	735
ENSMUSG00000085229	antisense	Gm11672	ENSMUST00000140380	antisense		11	-1	106127351	645
ENSMUSG00000026311	protein_coding	Asb1	ENSMUST00000186068	protein_coding		1	1	91540732	349
ENSMUSG00000041762	protein_coding	Gpr155	ENSMUST00000112044	protein_coding	alternative2	2	-1	73386412	4201
ENSMUSG00000024694	protein_coding	Keg1	ENSMUST00000147335	retained_intron		19	1	12695814	443
ENSMUSG00000029571	protein_coding	Tmem106b	ENSMUST00000124234	protein_coding		6	1	13069759	425
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000025270	protein_coding	principal1	18	1	12128741	3790
ENSMUSG00000096847	protein_coding	Tmem151b	ENSMUST00000180252	protein_coding	principal1	17	-1	45549677	4839
ENSMUSG00000041762	protein_coding	Gpr155	ENSMUST00000112043	protein_coding	principal3	2	-1	73386443	3284
ENSMUSG00000024694	protein_coding	Keg1	ENSMUST00000154822	protein_coding		19	1	12695814	704
ENSMUSG00000020528	protein_coding	Prpsap2	ENSMUST00000168115	protein_coding	principal1	11	-1	61762088	1771
ENSMUSG00000029571	protein_coding	Tmem106b	ENSMUST00000142211	protein_coding		6	1	13069816	507
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234967	retained_intron		18	1	12128755	443
ENSMUSG00000041762	protein_coding	Gpr155	ENSMUST00000131430	protein_coding		2	-1	73362511	741
ENSMUSG00000092411	unprocessed_pseudogene	Gm5594	ENSMUST00000172712	unprocessed_pseudogene		7	-1	42358002	1429
ENSMUSG00000092382	unprocessed_pseudogene	Vmn2r-ps59	ENSMUST00000174596	unprocessed_pseudogene		7	1	42378459	246
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000215926	protein_coding		10	-1	30771840	2875
ENSMUSG00000084981	antisense	Gm15962	ENSMUST00000125496	antisense		19	-1	12721203	461
ENSMUSG00000084981	antisense	Gm15962	ENSMUST00000124184	antisense		19	-1	12721247	750
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000036618	protein_coding	principal1	14	-1	31168641	7999
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000144311	processed_transcript		4	1	116123840	557
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000213836	protein_coding		10	-1	30771842	2989
ENSMUSG00000038274	protein_coding	Fau	ENSMUST00000043074	protein_coding	principal1	19	1	6057943	508
ENSMUSG00000070621	unprocessed_pseudogene	Vmn2r-ps60	ENSMUST00000173296	unprocessed_pseudogene		7	-1	42430724	897
ENSMUSG00000044626	protein_coding	Liph	ENSMUST00000060673	protein_coding	principal2	16	-1	21995663	3923
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000217398	nonsense_mediated_decay		10	-1	30722705	561
ENSMUSG00000038274	protein_coding	Fau	ENSMUST00000236336	protein_coding		19	1	6057951	392
ENSMUSG00000026311	protein_coding	Asb1	ENSMUST00000188081	protein_coding		1	1	91541080	1272
ENSMUSG00000038274	protein_coding	Fau	ENSMUST00000236021	retained_intron		19	1	6057954	370
ENSMUSG00000099966	antisense	2810402E24Rik	ENSMUST00000190699	antisense		14	1	20641009	3040
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000159208	processed_transcript		14	-1	31140174	242
ENSMUSG00000076614	IG_C_gene	Ighg1	ENSMUST00000194304	IG_C_gene	principal5	12	-1	113330523	2482
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000215725	protein_coding		10	-1	30803326	1445
ENSMUSG00000044626	protein_coding	Liph	ENSMUST00000074230	protein_coding		16	-1	21995451	2051
ENSMUSG00000026311	protein_coding	Asb1	ENSMUST00000188879	protein_coding		1	1	91541080	1299
ENSMUSG00000084925	antisense	1810062O18Rik	ENSMUST00000129237	antisense		14	1	20546079	647
ENSMUSG00000039697	protein_coding	Ncoa7	ENSMUST00000068567	protein_coding		10	-1	30803107	5105
ENSMUSG00000076614	IG_C_gene	Ighg1	ENSMUST00000103420	IG_C_gene	alternative2	12	-1	113330523	1076
ENSMUSG00000110894	TEC	Gm48335	ENSMUST00000215097	TEC		10	-1	30743962	3811
ENSMUSG00000044626	protein_coding	Liph	ENSMUST00000231766	protein_coding	alternative1	16	-1	21995440	2118
ENSMUSG00000038274	protein_coding	Fau	ENSMUST00000236976	retained_intron		19	1	6057954	744
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000161129	retained_intron		14	-1	31145453	3001
ENSMUSG00000114225	processed_pseudogene	Gm47883	ENSMUST00000224183	processed_pseudogene		13	-1	26680693	126
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234148	nonsense_mediated_decay		18	1	12128755	3078
ENSMUSG00000080757	processed_pseudogene	Gm15029	ENSMUST00000119742	processed_pseudogene		X	1	20911596	199
ENSMUSG00000038274	protein_coding	Fau	ENSMUST00000236217	protein_coding	principal1	19	1	6057969	503
ENSMUSG00000029571	protein_coding	Tmem106b	ENSMUST00000031556	protein_coding	principal1	6	1	13069839	6002
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000160720	retained_intron		14	-1	31143725	3453
ENSMUSG00000086056	protein_coding	Gm4846	ENSMUST00000143922	protein_coding	principal1	1	-1	166497588	1744
ENSMUSG00000038274	protein_coding	Fau	ENSMUST00000237840	protein_coding	principal1	19	1	6058223	472
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000161631	retained_intron		14	-1	31140943	887
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000235060	processed_transcript		18	1	12128760	1306
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000159249	protein_coding		14	-1	31143192	591
ENSMUSG00000031563	protein_coding	Wwc2	ENSMUST00000057561	protein_coding	principal1	8	-1	47990551	8678
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234918	retained_intron		18	1	12128774	2061
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234709	retained_intron		18	1	12128780	1330
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234563	retained_intron		18	1	12128780	1477
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000162763	retained_intron		14	-1	31142997	524
ENSMUSG00000038274	protein_coding	Fau	ENSMUST00000179142	protein_coding	principal1	19	1	6057967	736
ENSMUSG00000044626	protein_coding	Liph	ENSMUST00000231682	nonsense_mediated_decay		16	-1	21995513	2065
ENSMUSG00000097399	antisense	Gm26555	ENSMUST00000180452	antisense		13	1	58281183	1037
ENSMUSG00000084925	antisense	1810062O18Rik	ENSMUST00000128848	antisense		14	1	20546114	745
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000161464	retained_intron		14	-1	31157384	444
ENSMUSG00000029571	protein_coding	Tmem106b	ENSMUST00000136742	retained_intron		6	1	13069851	789
ENSMUSG00000111351	processed_pseudogene	Gm48537	ENSMUST00000213596	processed_pseudogene		10	-1	20365437	428
ENSMUSG00000097399	antisense	Gm26555	ENSMUST00000180882	antisense		13	1	58281183	3726
ENSMUSG00000084925	antisense	1810062O18Rik	ENSMUST00000142099	antisense		14	1	20546257	392
ENSMUSG00000044626	protein_coding	Liph	ENSMUST00000232673	retained_intron		16	-1	21976465	535
ENSMUSG00000097399	antisense	Gm26555	ENSMUST00000190479	antisense		13	1	58281191	570
ENSMUSG00000031563	protein_coding	Wwc2	ENSMUST00000212282	retained_intron		8	-1	47990924	5592
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234931	retained_intron		18	1	12136696	1140
ENSMUSG00000044626	protein_coding	Liph	ENSMUST00000232120	retained_intron		16	-1	21976753	690
ENSMUSG00000032673	protein_coding	Prorsd1	ENSMUST00000039900	protein_coding	principal1	11	-1	29515033	918
ENSMUSG00000029571	protein_coding	Tmem106b	ENSMUST00000142798	processed_transcript		6	1	13069854	983
ENSMUSG00000082982	unprocessed_pseudogene	Olfr1149-ps1	ENSMUST00000118232	unprocessed_pseudogene		2	1	87839742	691
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234310	nonsense_mediated_decay		18	1	12136802	630
ENSMUSG00000029571	protein_coding	Tmem106b	ENSMUST00000122916	protein_coding		6	1	13070251	723
ENSMUSG00000045709	transcribed_unitary_pseudogene	Smkr-ps	ENSMUST00000141679	transcribed_unitary_pseudogene		6	1	29985235	1003
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234652	retained_intron		18	1	12136912	263
ENSMUSG00000048234	protein_coding	Rnf149	ENSMUST00000062525	protein_coding	principal1	1	-1	39577405	2492
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000235084	retained_intron		18	1	12139147	1365
ENSMUSG00000045709	transcribed_unitary_pseudogene	Smkr-ps	ENSMUST00000124522	processed_transcript		6	1	29985362	834
ENSMUSG00000045709	transcribed_unitary_pseudogene	Smkr-ps	ENSMUST00000238560	processed_transcript		6	1	29986072	836
ENSMUSG00000084925	antisense	1810062O18Rik	ENSMUST00000141265	antisense		14	1	20546293	751
ENSMUSG00000045709	transcribed_unitary_pseudogene	Smkr-ps	ENSMUST00000238228	processed_transcript		6	1	29986095	972
ENSMUSG00000084925	antisense	1810062O18Rik	ENSMUST00000225721	antisense		14	1	20564746	433
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234985	protein_coding		18	1	12139377	536
ENSMUSG00000100570	lincRNA	Gm29399	ENSMUST00000187292	lincRNA		Y	-1	27814255	1495
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000235106	retained_intron		18	1	12147248	3817
ENSMUSG00000112378	processed_pseudogene	Gm47261	ENSMUST00000220207	processed_pseudogene		10	1	62702196	404
ENSMUSG00000021214	protein_coding	Akr1c18	ENSMUST00000110704	protein_coding	alternative2	13	-1	4150628	1103
ENSMUSG00000022371	protein_coding	Col14a1	ENSMUST00000023053	protein_coding	alternative1	15	1	55307750	6457
ENSMUSG00000084925	antisense	1810062O18Rik	ENSMUST00000224755	antisense		14	1	20564839	595
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234415	nonsense_mediated_decay		18	1	12148816	544
ENSMUSG00000084925	antisense	1810062O18Rik	ENSMUST00000223899	antisense		14	1	20564887	458
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234021	retained_intron		18	1	12149414	366
ENSMUSG00000084925	antisense	1810062O18Rik	ENSMUST00000124940	antisense		14	1	20565011	485
ENSMUSG00000100570	lincRNA	Gm29399	ENSMUST00000190828	lincRNA		Y	-1	27813803	615
ENSMUSG00000100570	lincRNA	Gm29399	ENSMUST00000186457	lincRNA		Y	-1	27813803	431
ENSMUSG00000048234	protein_coding	Rnf149	ENSMUST00000195136	nonsense_mediated_decay		1	-1	39577356	668
ENSMUSG00000020177	protein_coding	9530003J23Rik	ENSMUST00000159193	protein_coding	principal1	10	-1	117238654	1033
ENSMUSG00000101863	unprocessed_pseudogene	Gm29400	ENSMUST00000187208	unprocessed_pseudogene		Y	1	27857973	695
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234762	retained_intron		18	1	12152673	576
ENSMUSG00000048234	protein_coding	Rnf149	ENSMUST00000153381	retained_intron		1	-1	39558757	509
ENSMUSG00000021662	protein_coding	Arhgef28	ENSMUST00000238746	protein_coding	alternative2	13	-1	98016417	4660
ENSMUSG00000099727	unprocessed_pseudogene	Gm29401	ENSMUST00000186690	unprocessed_pseudogene		Y	1	27894779	615
ENSMUSG00000024404	protein_coding	Riok3	ENSMUST00000234006	retained_intron		18	1	12152736	506
ENSMUSG00000048234	protein_coding	Rnf149	ENSMUST00000195705	protein_coding		1	-1	39577303	389
ENSMUSG00000051081	protein_coding	Gm4847	ENSMUST00000046662	protein_coding	principal1	1	-1	166647693	3012
ENSMUSG00000036923	protein_coding	Stox1	ENSMUST00000148720	protein_coding		10	-1	62725801	1012
ENSMUSG00000022371	protein_coding	Col14a1	ENSMUST00000110221	protein_coding	principal2	15	1	55307919	5679
ENSMUSG00000031145	protein_coding	Prickle3	ENSMUST00000033485	protein_coding	principal2	X	1	7657260	2301
ENSMUSG00000032673	protein_coding	Prorsd1	ENSMUST00000133103	protein_coding		11	-1	29515031	2126
ENSMUSG00000099791	unprocessed_pseudogene	Gm20891	ENSMUST00000191560	unprocessed_pseudogene		Y	1	27924318	696
ENSMUSG00000083798	processed_pseudogene	Gm14584	ENSMUST00000118956	processed_pseudogene		X	1	53418331	637
ENSMUSG00000101473	unprocessed_pseudogene	Gm20893	ENSMUST00000191376	unprocessed_pseudogene		Y	1	27998840	693
ENSMUSG00000031145	protein_coding	Prickle3	ENSMUST00000141876	retained_intron		X	1	7657472	1708
ENSMUSG00000085894	processed_transcript	Gm15832	ENSMUST00000146314	processed_transcript		1	-1	39552002	1832
ENSMUSG00000021214	protein_coding	Akr1c18	ENSMUST00000021635	protein_coding	principal3	13	-1	4150654	1200
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000159757	retained_intron		14	-1	31161829	2116
ENSMUSG00000022371	protein_coding	Col14a1	ENSMUST00000125416	protein_coding		15	1	55448826	2085
ENSMUSG00000020863	protein_coding	Luc7l3	ENSMUST00000166312	protein_coding		11	-1	94321958	5244
ENSMUSG00000101753	lincRNA	Gm28799	ENSMUST00000186506	lincRNA		Y	-1	28108426	1498
ENSMUSG00000020177	protein_coding	9530003J23Rik	ENSMUST00000020392	protein_coding	principal1	10	-1	117238703	1233
ENSMUSG00000078430	unprocessed_pseudogene	Gm10936	ENSMUST00000105264	unprocessed_pseudogene		10	1	117248021	252
ENSMUSG00000022371	protein_coding	Col14a1	ENSMUST00000110217	protein_coding	alternative1	15	1	55307751	6457
ENSMUSG00000036923	protein_coding	Stox1	ENSMUST00000133371	protein_coding	principal1	10	-1	62726128	3510
ENSMUSG00000020700	protein_coding	Map3k3	ENSMUST00000002044	protein_coding	principal1	11	1	106084613	3450
ENSMUSG00000042286	protein_coding	Stab1	ENSMUST00000159532	retained_intron		14	-1	31168595	2427
ENSMUSG00000115414	processed_transcript	Gm49257	ENSMUST00000228551	processed_transcript		15	-1	55479377	352
ENSMUSG00000031145	protein_coding	Prickle3	ENSMUST00000129662	protein_coding	alternative2	X	1	7658533	2376
ENSMUSG00000020863	protein_coding	Luc7l3	ENSMUST00000132623	protein_coding		11	-1	94297067	1176
ENSMUSG00000036923	protein_coding	Stox1	ENSMUST00000126979	nonsense_mediated_decay		10	-1	62725801	507
ENSMUSG00000115414	processed_transcript	Gm49257	ENSMUST00000227284	processed_transcript		15	-1	55479348	363
ENSMUSG00000020700	protein_coding	Map3k3	ENSMUST00000129793	processed_transcript		11	1	106151212	698
ENSMUSG00000112901	processed_pseudogene	Gm18514	ENSMUST00000218980	processed_pseudogene		10	1	62669803	436
ENSMUSG00000020700	protein_coding	Map3k3	ENSMUST00000124449	processed_transcript		11	1	106152064	520
ENSMUSG00000112449	protein_coding	Srp54b	ENSMUST00000110708	protein_coding	principal1	12	1	55155104	3646
ENSMUSG00000031145	protein_coding	Prickle3	ENSMUST00000123172	retained_intron		X	1	7662763	2487
ENSMUSG00000030838	protein_coding	Ush1c	ENSMUST00000143155	nonsense_mediated_decay		7	-1	46238490	3036
ENSMUSG00000031145	protein_coding	Prickle3	ENSMUST00000153994	retained_intron		X	1	7666098	500
ENSMUSG00000112449	protein_coding	Srp54b	ENSMUST00000217670	processed_transcript		12	1	55155370	580
ENSMUSG00000112449	protein_coding	Srp54b	ENSMUST00000218889	protein_coding		12	1	55164284	428
ENSMUSG00000060176	protein_coding	Kif27	ENSMUST00000225388	protein_coding	principal1	13	-1	58359122	5121
ENSMUSG00000028062	protein_coding	Lamtor2	ENSMUST00000145548	retained_intron		3	-1	88551094	585
ENSMUSG00000112449	protein_coding	Srp54b	ENSMUST00000218128	retained_intron		12	1	55180190	746
ENSMUSG00000095232	protein_coding	Scgb1b19	ENSMUST00000165813	protein_coding	principal1	7	1	33287291	418
ENSMUSG00000117837	lincRNA	Gm41821	ENSMUST00000236341	lincRNA		19	1	23282096	429
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000067284	protein_coding	principal1	12	1	21286358	2499
ENSMUSG00000030838	protein_coding	Ush1c	ENSMUST00000009667	protein_coding	principal3	7	-1	46238503	3072
ENSMUSG00000096102	processed_pseudogene	Gm9167	ENSMUST00000182469	processed_pseudogene		7	1	33312140	962
ENSMUSG00000091034	protein_coding	Gm17660	ENSMUST00000164471	protein_coding	principal1	5	-1	104077608	520
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000221145	protein_coding		12	1	21286399	1001
ENSMUSG00000091034	protein_coding	Gm17660	ENSMUST00000198485	protein_coding	principal1	5	-1	104077592	522
ENSMUSG00000117303	bidirectional_promoter_lncRNA	Gm49889	ENSMUST00000232734	bidirectional_promoter_lncRNA		17	-1	28328521	1569
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000222968	protein_coding		12	1	21286399	1858
ENSMUSG00000060176	protein_coding	Kif27	ENSMUST00000224694	nonsense_mediated_decay		13	-1	58354862	3315
ENSMUSG00000091034	protein_coding	Gm17660	ENSMUST00000178967	protein_coding	principal1	5	-1	104077608	337
ENSMUSG00000031146	protein_coding	Plp2	ENSMUST00000033486	protein_coding	principal1	X	-1	7671390	1157
ENSMUSG00000020863	protein_coding	Luc7l3	ENSMUST00000107821	protein_coding	alternative1	11	-1	94321988	2050
ENSMUSG00000060176	protein_coding	Kif27	ENSMUST00000225680	retained_intron		13	-1	58313261	601
ENSMUSG00000105261	TEC	Gm43333	ENSMUST00000198340	TEC		5	-1	104072325	2262
ENSMUSG00000060176	protein_coding	Kif27	ENSMUST00000043605	protein_coding	principal1	13	-1	58354862	4462
ENSMUSG00000112623	TEC	4933436P19Rik	ENSMUST00000217736	TEC		10	-1	78471256	1442
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000221042	nonsense_mediated_decay		12	1	21291786	1892
ENSMUSG00000020526	protein_coding	Znhit3	ENSMUST00000103195	protein_coding	principal1	11	-1	84916366	998
ENSMUSG00000028062	protein_coding	Lamtor2	ENSMUST00000029698	protein_coding	principal1	3	-1	88553024	668
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000222883	processed_transcript		12	1	21298888	496
ENSMUSG00000069516	protein_coding	Lyz2	ENSMUST00000092163	protein_coding	principal1	10	-1	117282321	1316
ENSMUSG00000020863	protein_coding	Luc7l3	ENSMUST00000021226	protein_coding	principal2	11	-1	94321988	3373
ENSMUSG00000113383	lincRNA	Gm47267	ENSMUST00000221223	lincRNA		12	1	103483442	715
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000221992	processed_transcript		12	1	21301271	780
ENSMUSG00000030838	protein_coding	Ush1c	ENSMUST00000154292	protein_coding		7	-1	46238464	2767
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000220940	retained_intron		12	1	21309675	554
ENSMUSG00000031146	protein_coding	Plp2	ENSMUST00000136155	retained_intron		X	-1	7671372	1212
ENSMUSG00000027427	protein_coding	Polr3f	ENSMUST00000028914	protein_coding	principal1	2	1	144527718	4403
ENSMUSG00000031146	protein_coding	Plp2	ENSMUST00000143854	retained_intron		X	-1	7671313	600
ENSMUSG00000054309	protein_coding	Cpsf3	ENSMUST00000220665	retained_intron		12	1	21313708	253
ENSMUSG00000030838	protein_coding	Ush1c	ENSMUST00000177212	protein_coding		7	-1	46238498	1696
ENSMUSG00000055704	TEC	Gm9978	ENSMUST00000069431	TEC		10	-1	78487842	3273
ENSMUSG00000030838	protein_coding	Ush1c	ENSMUST00000176371	protein_coding		7	-1	46230314	1865
ENSMUSG00000028062	protein_coding	Lamtor2	ENSMUST00000119002	protein_coding		3	-1	88552859	568
ENSMUSG00000118655	processed_transcript	AC156032.1	ENSMUST00000172962	processed_transcript		12	-1	21247323	448
ENSMUSG00000003863	protein_coding	Ppfia3	ENSMUST00000210479	processed_transcript		7	-1	45361822	4575
ENSMUSG00000112842	transcribed_unprocessed_pseudogene	Gm30232	ENSMUST00000220136	transcribed_unprocessed_pseudogene		10	1	78483595	2162
ENSMUSG00000020863	protein_coding	Luc7l3	ENSMUST00000107820	protein_coding	alternative1	11	-1	94321988	3478
ENSMUSG00000112842	transcribed_unprocessed_pseudogene	Gm30232	ENSMUST00000219248	processed_transcript		10	1	78491674	605
ENSMUSG00000030838	protein_coding	Ush1c	ENSMUST00000129266	retained_intron		7	-1	46201770	708
ENSMUSG00000073778	antisense	Faddos	ENSMUST00000097928	antisense		7	1	144567355	1053
ENSMUSG00000028062	protein_coding	Lamtor2	ENSMUST00000156421	processed_transcript		3	-1	88552893	438
ENSMUSG00000020863	protein_coding	Luc7l3	ENSMUST00000138369	nonsense_mediated_decay		11	-1	94293223	521
ENSMUSG00000027427	protein_coding	Polr3f	ENSMUST00000136999	processed_transcript		2	1	144527742	2177
ENSMUSG00000027427	protein_coding	Polr3f	ENSMUST00000110017	protein_coding		2	1	144527748	1632
ENSMUSG00000037217	protein_coding	Syn1	ENSMUST00000115345	protein_coding	alternative1	X	-1	20921004	3261
ENSMUSG00000071317	protein_coding	Bves	ENSMUST00000095715	protein_coding	principal1	10	1	45335772	4368
ENSMUSG00000030463	protein_coding	4933421I07Rik	ENSMUST00000032648	protein_coding	principal1	7	-1	42448120	1413
ENSMUSG00000028062	protein_coding	Lamtor2	ENSMUST00000145172	retained_intron		3	-1	88553074	567
ENSMUSG00000030838	protein_coding	Ush1c	ENSMUST00000148527	processed_transcript		7	-1	46219767	395
ENSMUSG00000020526	protein_coding	Znhit3	ENSMUST00000144552	processed_transcript		11	-1	84916349	738
ENSMUSG00000046456	protein_coding	Tmem150b	ENSMUST00000086364	protein_coding		7	-1	4725249	2822
ENSMUSG00000069515	protein_coding	Lyz1	ENSMUST00000092162	protein_coding	principal1	10	-1	117292868	1263
ENSMUSG00000027427	protein_coding	Polr3f	ENSMUST00000155567	processed_transcript		2	1	144527780	792
ENSMUSG00000030838	protein_coding	Ush1c	ENSMUST00000238793	protein_coding		7	-1	46230583	711
ENSMUSG00000071317	protein_coding	Bves	ENSMUST00000213557	retained_intron		10	1	45353508	494
ENSMUSG00000020863	protein_coding	Luc7l3	ENSMUST00000107822	nonsense_mediated_decay		11	-1	94321895	1601
ENSMUSG00000031077	protein_coding	Fadd	ENSMUST00000033394	protein_coding	principal1	7	-1	144582463	3903
ENSMUSG00000020526	protein_coding	Znhit3	ENSMUST00000136656	processed_transcript		11	-1	84916366	725
ENSMUSG00000030463	protein_coding	4933421I07Rik	ENSMUST00000206593	retained_intron		7	-1	42448103	895
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000044505	protein_coding	principal4	6	-1	56362392	3907
ENSMUSG00000037217	protein_coding	Syn1	ENSMUST00000081893	protein_coding	principal4	X	-1	20920918	3209
ENSMUSG00000113767	unprocessed_pseudogene	Gm48873	ENSMUST00000221716	unprocessed_pseudogene		12	1	87394444	387
ENSMUSG00000020526	protein_coding	Znhit3	ENSMUST00000127838	processed_transcript		11	-1	84916305	516
ENSMUSG00000020427	protein_coding	Igfbp3	ENSMUST00000020702	protein_coding	principal1	11	-1	7213897	2421
ENSMUSG00000114103	processed_pseudogene	Gm8557	ENSMUST00000220777	processed_pseudogene		12	1	87420511	475
ENSMUSG00000020863	protein_coding	Luc7l3	ENSMUST00000171033	retained_intron		11	-1	94298218	621
ENSMUSG00000027427	protein_coding	Polr3f	ENSMUST00000143292	processed_transcript		2	1	144532360	835
ENSMUSG00000020863	protein_coding	Luc7l3	ENSMUST00000135311	processed_transcript		11	-1	94299031	397
ENSMUSG00000027427	protein_coding	Polr3f	ENSMUST00000152311	processed_transcript		2	1	144535941	490
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000203372	protein_coding	alternative1	6	-1	56569103	3147
ENSMUSG00000020526	protein_coding	Znhit3	ENSMUST00000156046	retained_intron		11	-1	84916324	761
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000239143	protein_coding		6	-1	56652487	3174
ENSMUSG00000020863	protein_coding	Luc7l3	ENSMUST00000165620	retained_intron		11	-1	94300231	550
ENSMUSG00000046456	protein_coding	Tmem150b	ENSMUST00000086363	protein_coding	principal1	7	-1	4725082	1341
ENSMUSG00000027427	protein_coding	Polr3f	ENSMUST00000134051	processed_transcript		2	1	144536176	690
ENSMUSG00000020427	protein_coding	Igfbp3	ENSMUST00000135887	protein_coding	principal1	11	-1	7213923	1709
ENSMUSG00000038630	protein_coding	Zkscan16	ENSMUST00000107554	protein_coding	principal1	4	1	58943628	2794
ENSMUSG00000044556	protein_coding	Tex38	ENSMUST00000106521	protein_coding	principal1	4	-1	115781018	802
ENSMUSG00000021103	protein_coding	Mnat1	ENSMUST00000187549	protein_coding		12	1	73123717	3688
ENSMUSG00000057113	protein_coding	Npm1	ENSMUST00000075641	protein_coding	principal1	11	-1	33163206	1633
ENSMUSG00000073789	TEC	Gm10577	ENSMUST00000238322	TEC		4	-1	101020697	1547
ENSMUSG00000073789	TEC	Gm10577	ENSMUST00000097954	TEC		4	-1	101020696	399
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000203967	processed_transcript		6	-1	56361855	2086
ENSMUSG00000057113	protein_coding	Npm1	ENSMUST00000093201	protein_coding		11	-1	33163072	1192
ENSMUSG00000036412	protein_coding	Arsi	ENSMUST00000040359	protein_coding	principal1	18	1	60911780	2975
ENSMUSG00000021103	protein_coding	Mnat1	ENSMUST00000189644	nonsense_mediated_decay		12	1	73123717	1294
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000177170	retained_intron		17	-1	25861383	5946
ENSMUSG00000039704	protein_coding	Lmbrd2	ENSMUST00000227556	protein_coding	principal1	15	1	9140550	8099
ENSMUSG00000057113	protein_coding	Npm1	ENSMUST00000141881	processed_transcript		11	-1	33154465	822
ENSMUSG00000041164	protein_coding	Zmiz2	ENSMUST00000012612	protein_coding	principal4	11	1	6389364	4199
ENSMUSG00000048307	protein_coding	Ankrd46	ENSMUST00000228630	retained_intron		15	-1	36496789	4133
ENSMUSG00000021629	protein_coding	Slc30a5	ENSMUST00000067246	protein_coding	principal2	13	-1	100833427	3179
ENSMUSG00000041164	protein_coding	Zmiz2	ENSMUST00000109787	protein_coding	principal4	11	1	6389074	4116
ENSMUSG00000039704	protein_coding	Lmbrd2	ENSMUST00000090380	protein_coding		15	1	9140665	3210
ENSMUSG00000057113	protein_coding	Npm1	ENSMUST00000109354	protein_coding		11	-1	33163077	1157
ENSMUSG00000041164	protein_coding	Zmiz2	ENSMUST00000109786	protein_coding	principal4	11	1	6389471	4319
ENSMUSG00000039704	protein_coding	Lmbrd2	ENSMUST00000226149	processed_transcript		15	1	9155533	621
ENSMUSG00000041762	protein_coding	Gpr155	ENSMUST00000184503	retained_intron		2	-1	73386398	3389
ENSMUSG00000042784	protein_coding	Muc1	ENSMUST00000041142	protein_coding	principal1	3	1	89229057	2242
ENSMUSG00000021103	protein_coding	Mnat1	ENSMUST00000021523	protein_coding	principal1	12	1	73123717	2505
ENSMUSG00000057113	protein_coding	Npm1	ENSMUST00000101375	protein_coding		11	-1	33163076	966
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000114327	protein_coding		6	-1	56362519	6821
ENSMUSG00000021629	protein_coding	Slc30a5	ENSMUST00000225086	nonsense_mediated_decay		13	-1	100814641	2022
ENSMUSG00000039704	protein_coding	Lmbrd2	ENSMUST00000227216	processed_transcript		15	1	9175463	763
ENSMUSG00000057113	protein_coding	Npm1	ENSMUST00000146759	processed_transcript		11	-1	33157277	450
ENSMUSG00000021629	protein_coding	Slc30a5	ENSMUST00000225922	protein_coding	alternative2	13	-1	100833340	2722
ENSMUSG00000021629	protein_coding	Slc30a5	ENSMUST00000225129	retained_intron		13	-1	100806963	589
ENSMUSG00000021629	protein_coding	Slc30a5	ENSMUST00000224177	retained_intron		13	-1	100824549	4000
ENSMUSG00000076470	TR_V_gene	Trbv13-3	ENSMUST00000103271	TR_V_gene	principal1	6	1	41130147	340
ENSMUSG00000079033	protein_coding	Mef2b	ENSMUST00000163756	protein_coding	principal3	8	1	70139711	1337
ENSMUSG00000042784	protein_coding	Muc1	ENSMUST00000146844	processed_transcript		3	1	89231239	500
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000170774	protein_coding		6	-1	56369583	2132
ENSMUSG00000074364	protein_coding	Ehd2	ENSMUST00000098799	protein_coding	principal1	7	-1	15967567	5119
ENSMUSG00000117753	processed_pseudogene	Gm5504	ENSMUST00000236748	processed_pseudogene		18	1	42200743	605
ENSMUSG00000041762	protein_coding	Gpr155	ENSMUST00000048504	processed_transcript		2	-1	73386398	2625
ENSMUSG00000042784	protein_coding	Muc1	ENSMUST00000139206	processed_transcript		3	1	89231471	476
ENSMUSG00000041164	protein_coding	Zmiz2	ENSMUST00000102914	protein_coding	alternative2	11	1	6395188	3806
ENSMUSG00000048307	protein_coding	Ankrd46	ENSMUST00000057486	protein_coding	principal1	15	-1	36496820	2509
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000203462	nonsense_mediated_decay		6	-1	56123008	442
ENSMUSG00000041164	protein_coding	Zmiz2	ENSMUST00000109785	protein_coding	alternative2	11	1	6395605	3542
ENSMUSG00000041762	protein_coding	Gpr155	ENSMUST00000129184	processed_transcript		2	-1	73370129	649
ENSMUSG00000097525	antisense	Platr31	ENSMUST00000180653	antisense		6	1	127100297	1466
ENSMUSG00000034825	protein_coding	Nrip3	ENSMUST00000041460	protein_coding		7	-1	109782025	3927
ENSMUSG00000074364	protein_coding	Ehd2	ENSMUST00000144956	protein_coding		7	-1	15967475	375
ENSMUSG00000028780	protein_coding	Sema3c	ENSMUST00000030568	protein_coding	principal1	5	1	17574281	5491
ENSMUSG00000041164	protein_coding	Zmiz2	ENSMUST00000124588	retained_intron		11	1	6396729	723
ENSMUSG00000041762	protein_coding	Gpr155	ENSMUST00000134595	retained_intron		2	-1	73386411	1339
ENSMUSG00000079033	protein_coding	Mef2b	ENSMUST00000110146	protein_coding	principal3	8	1	70152778	1342
ENSMUSG00000107945	processed_pseudogene	Rpl7a-ps14	ENSMUST00000205097	processed_pseudogene		7	-1	13440292	790
ENSMUSG00000008604	protein_coding	Ubqln4	ENSMUST00000008748	protein_coding	principal1	3	1	88553758	3330
ENSMUSG00000048307	protein_coding	Ankrd46	ENSMUST00000228601	protein_coding		15	-1	36496734	532
ENSMUSG00000034825	protein_coding	Nrip3	ENSMUST00000033331	protein_coding	principal1	7	-1	109781545	3910
ENSMUSG00000028780	protein_coding	Sema3c	ENSMUST00000170181	nonsense_mediated_decay		5	1	17574649	1142
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000168944	protein_coding		6	-1	56369602	2126
ENSMUSG00000048307	protein_coding	Ankrd46	ENSMUST00000226506	processed_transcript		15	-1	36496734	1098
ENSMUSG00000085519	antisense	Gm13703	ENSMUST00000150705	antisense		2	1	73357268	449
ENSMUSG00000048307	protein_coding	Ankrd46	ENSMUST00000228941	processed_transcript		15	-1	36496715	428
ENSMUSG00000034825	protein_coding	Nrip3	ENSMUST00000207400	protein_coding		7	-1	109781543	338
ENSMUSG00000083043	processed_pseudogene	Gm13433	ENSMUST00000121701	processed_pseudogene		2	1	25543479	240
ENSMUSG00000028780	protein_coding	Sema3c	ENSMUST00000170348	retained_intron		5	1	17574766	1549
ENSMUSG00000021662	protein_coding	Arhgef28	ENSMUST00000109426	protein_coding	principal2	13	-1	98206167	5387
ENSMUSG00000028780	protein_coding	Sema3c	ENSMUST00000169603	protein_coding		5	1	17574899	785
ENSMUSG00000008604	protein_coding	Ubqln4	ENSMUST00000194303	retained_intron		3	1	88553764	1379
ENSMUSG00000079033	protein_coding	Mef2b	ENSMUST00000110143	protein_coding	alternative2	8	1	70152778	1312
ENSMUSG00000008604	protein_coding	Ubqln4	ENSMUST00000192962	nonsense_mediated_decay		3	1	88553796	590
ENSMUSG00000044313	protein_coding	Mab21l3	ENSMUST00000061831	protein_coding	principal1	3	-1	101836223	3558
ENSMUSG00000008604	protein_coding	Ubqln4	ENSMUST00000192687	processed_transcript		3	1	88556703	362
ENSMUSG00000028780	protein_coding	Sema3c	ENSMUST00000115271	retained_intron		5	1	17694202	4075
ENSMUSG00000008604	protein_coding	Ubqln4	ENSMUST00000195498	retained_intron		3	1	88563907	871
ENSMUSG00000021662	protein_coding	Arhgef28	ENSMUST00000225884	nonsense_mediated_decay		13	-1	98206439	5307
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000166102	protein_coding	alternative1	6	-1	56362311	8766
ENSMUSG00000044313	protein_coding	Mab21l3	ENSMUST00000118411	protein_coding	principal1	3	-1	101848959	2700
ENSMUSG00000041779	protein_coding	Tram2	ENSMUST00000037998	protein_coding	principal1	1	-1	21079229	6492
ENSMUSG00000079033	protein_coding	Mef2b	ENSMUST00000110141	protein_coding	alternative2	8	1	70152781	1253
ENSMUSG00000095139	protein_coding	Pou3f2	ENSMUST00000178174	protein_coding	principal1	4	-1	22488366	5587
ENSMUSG00000079033	protein_coding	Mef2b	ENSMUST00000110140	protein_coding	alternative2	8	1	70152781	1223
ENSMUSG00000038028	protein_coding	Tigar	ENSMUST00000039913	protein_coding	principal1	6	-1	127109550	3651
ENSMUSG00000000579	protein_coding	Dynlt1c	ENSMUST00000092966	protein_coding	principal1	17	1	6601671	2589
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000166890	protein_coding		6	-1	56369631	4728
ENSMUSG00000000579	protein_coding	Dynlt1c	ENSMUST00000149027	retained_intron		17	1	6601792	493
ENSMUSG00000110993	TEC	Gm47963	ENSMUST00000214783	TEC		9	1	37497769	2144
ENSMUSG00000038028	protein_coding	Tigar	ENSMUST00000200988	nonsense_mediated_decay		6	-1	127109557	855
ENSMUSG00000041779	protein_coding	Tram2	ENSMUST00000187210	processed_transcript		1	-1	21043656	684
ENSMUSG00000000579	protein_coding	Dynlt1c	ENSMUST00000138598	retained_intron		17	1	6601792	3250
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000164752	protein_coding	alternative1	6	-1	56362810	3449
ENSMUSG00000000579	protein_coding	Dynlt1c	ENSMUST00000124894	retained_intron		17	1	6601804	675
ENSMUSG00000062352	protein_coding	Itgb1bp1	ENSMUST00000232072	protein_coding	principal1	12	-1	21286219	954
ENSMUSG00000021662	protein_coding	Arhgef28	ENSMUST00000225663	processed_transcript		13	-1	98032679	4977
ENSMUSG00000021662	protein_coding	Arhgef28	ENSMUST00000225269	retained_intron		13	-1	97946927	783
ENSMUSG00000021662	protein_coding	Arhgef28	ENSMUST00000223849	protein_coding		13	-1	98176487	2001
ENSMUSG00000021662	protein_coding	Arhgef28	ENSMUST00000224866	protein_coding		13	-1	98175987	203
ENSMUSG00000053720	protein_coding	Vmn2r43	ENSMUST00000066317	protein_coding	principal1	7	-1	8260599	2849
ENSMUSG00000076615	IG_C_gene	Ighg3	ENSMUST00000223179	IG_C_gene	principal5	12	-1	113361232	2414
ENSMUSG00000107859	lincRNA	Gm30731	ENSMUST00000203909	lincRNA		4	1	22490548	825
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000164037	protein_coding		6	-1	56362366	3068
ENSMUSG00000076615	IG_C_gene	Ighg3	ENSMUST00000103423	IG_C_gene	alternative2	12	-1	113361232	1082
ENSMUSG00000062352	protein_coding	Itgb1bp1	ENSMUST00000076260	protein_coding	principal1	12	-1	21286284	1921
ENSMUSG00000027030	protein_coding	Stk39	ENSMUST00000102715	protein_coding	principal1	2	-1	68472268	3536
ENSMUSG00000085068	antisense	Gm15895	ENSMUST00000157018	antisense		8	1	110805638	731
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000204821	retained_intron		6	-1	56362374	1429
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000203492	retained_intron		6	-1	56362313	3935
ENSMUSG00000101350	lincRNA	Gm28962	ENSMUST00000187993	lincRNA		Y	-1	57824297	621
ENSMUSG00000021680	protein_coding	Crhbp	ENSMUST00000221025	protein_coding	principal1	13	-1	95444924	1779
ENSMUSG00000101350	lincRNA	Gm28962	ENSMUST00000190244	lincRNA		Y	-1	57824297	437
ENSMUSG00000004347	protein_coding	Pde1c	ENSMUST00000203689	retained_intron		6	-1	56369604	329
ENSMUSG00000081810	processed_pseudogene	Gm11878	ENSMUST00000117908	processed_pseudogene		4	1	22519628	400
ENSMUSG00000062352	protein_coding	Itgb1bp1	ENSMUST00000173729	protein_coding	principal1	12	-1	21286097	1701
ENSMUSG00000083514	processed_pseudogene	Gm11881	ENSMUST00000119408	processed_pseudogene		4	-1	22529009	572
ENSMUSG00000020527	protein_coding	Myo19	ENSMUST00000093969	protein_coding	principal1	11	1	84880148	4091
ENSMUSG00000021680	protein_coding	Crhbp	ENSMUST00000045583	protein_coding		13	-1	95444831	1701
ENSMUSG00000048222	protein_coding	Mfap1b	ENSMUST00000056732	protein_coding	principal1	2	-1	121474067	3362
ENSMUSG00000080762	processed_pseudogene	Gm11879	ENSMUST00000121885	processed_pseudogene		4	1	22704057	702
ENSMUSG00000062352	protein_coding	Itgb1bp1	ENSMUST00000173688	protein_coding		12	-1	21272123	512
ENSMUSG00000111217	processed_pseudogene	Gm48711	ENSMUST00000214799	processed_pseudogene		9	1	15823147	90
ENSMUSG00000020527	protein_coding	Myo19	ENSMUST00000123515	processed_transcript		11	1	84880170	748
ENSMUSG00000062352	protein_coding	Itgb1bp1	ENSMUST00000172834	protein_coding		12	-1	21286185	801
ENSMUSG00000062352	protein_coding	Itgb1bp1	ENSMUST00000173614	retained_intron		12	-1	21272770	858
ENSMUSG00000050901	protein_coding	Mtnr1b	ENSMUST00000182947	nonsense_mediated_decay		9	-1	15874556	1835
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000042334	protein_coding		17	1	28328471	830
ENSMUSG00000042138	protein_coding	Msantd2	ENSMUST00000239459	protein_coding	alternative2	9	1	37489021	2591
ENSMUSG00000050901	protein_coding	Mtnr1b	ENSMUST00000057920	protein_coding	principal1	9	-1	15874460	1095
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000233427	protein_coding	principal1	17	1	28328568	729
ENSMUSG00000002345	protein_coding	Borcs8	ENSMUST00000002418	protein_coding	principal3	8	1	70139499	810
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000233937	protein_coding		17	1	28328570	634
ENSMUSG00000042138	protein_coding	Msantd2	ENSMUST00000211060	protein_coding		9	1	37489319	2165
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000233895	protein_coding		17	1	28328577	546
ENSMUSG00000002345	protein_coding	Borcs8	ENSMUST00000123976	retained_intron		8	1	70139707	756
ENSMUSG00000081967	processed_pseudogene	Gm14017	ENSMUST00000121934	processed_pseudogene		2	1	121481129	386
ENSMUSG00000071547	protein_coding	Nt5dc2	ENSMUST00000227096	protein_coding	principal5	14	1	31131053	1848
ENSMUSG00000027030	protein_coding	Stk39	ENSMUST00000126663	retained_intron		2	-1	68366519	2578
ENSMUSG00000071547	protein_coding	Nt5dc2	ENSMUST00000226975	protein_coding		14	1	31131351	1462
ENSMUSG00000042138	protein_coding	Msantd2	ENSMUST00000048604	protein_coding	principal2	9	1	37489321	2291
ENSMUSG00000002345	protein_coding	Borcs8	ENSMUST00000123760	nonsense_mediated_decay		8	1	70139713	864
ENSMUSG00000071547	protein_coding	Nt5dc2	ENSMUST00000226588	protein_coding		14	1	31134310	881
ENSMUSG00000002345	protein_coding	Borcs8	ENSMUST00000129668	nonsense_mediated_decay		8	1	70139723	691
ENSMUSG00000027030	protein_coding	Stk39	ENSMUST00000130380	processed_transcript		2	-1	68223326	452
ENSMUSG00000071547	protein_coding	Nt5dc2	ENSMUST00000227794	protein_coding	alternative2	14	1	31134405	1858
ENSMUSG00000071547	protein_coding	Nt5dc2	ENSMUST00000227690	retained_intron		14	1	31138023	737
ENSMUSG00000002345	protein_coding	Borcs8	ENSMUST00000110139	protein_coding	alternative2	8	1	70140277	679
ENSMUSG00000027030	protein_coding	Stk39	ENSMUST00000134442	processed_transcript		2	-1	68251351	492
ENSMUSG00000058883	protein_coding	Zfp708	ENSMUST00000109742	protein_coding	principal2	13	-1	67081512	2416
ENSMUSG00000042138	protein_coding	Msantd2	ENSMUST00000209391	nonsense_mediated_decay		9	1	37489600	442
ENSMUSG00000027030	protein_coding	Stk39	ENSMUST00000144457	processed_transcript		2	-1	68251356	414
ENSMUSG00000027030	protein_coding	Stk39	ENSMUST00000139407	processed_transcript		2	-1	68251329	473
ENSMUSG00000042138	protein_coding	Msantd2	ENSMUST00000214298	protein_coding		9	1	37489600	423
ENSMUSG00000042138	protein_coding	Msantd2	ENSMUST00000211224	processed_transcript		9	1	37489627	243
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000128758	retained_intron		17	1	28328583	936
ENSMUSG00000042138	protein_coding	Msantd2	ENSMUST00000209769	retained_intron		9	1	37489735	460
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000233014	nonsense_mediated_decay		17	1	28328583	553
ENSMUSG00000058883	protein_coding	Zfp708	ENSMUST00000190566	protein_coding		13	-1	67081545	2406
ENSMUSG00000042138	protein_coding	Msantd2	ENSMUST00000211792	processed_transcript		9	1	37489819	231
ENSMUSG00000071547	protein_coding	Nt5dc2	ENSMUST00000090212	protein_coding		14	1	31134853	1407
ENSMUSG00000042138	protein_coding	Msantd2	ENSMUST00000213411	retained_intron		9	1	37517109	742
ENSMUSG00000042138	protein_coding	Msantd2	ENSMUST00000239463	protein_coding	principal2	9	1	37489321	2289
ENSMUSG00000034224	protein_coding	Slc38a8	ENSMUST00000036748	protein_coding	principal1	8	-1	119501698	2623
ENSMUSG00000025352	protein_coding	Gdf11	ENSMUST00000026408	protein_coding	principal1	10	-1	128891718	4062
ENSMUSG00000040197	protein_coding	Cd209e	ENSMUST00000033888	protein_coding	principal1	8	-1	3854309	1802
ENSMUSG00000058883	protein_coding	Zfp708	ENSMUST00000109743	protein_coding	alternative2	13	-1	67097976	2536
ENSMUSG00000114603	processed_pseudogene	Gm17938	ENSMUST00000225725	processed_pseudogene		13	1	67089485	646
ENSMUSG00000027030	protein_coding	Stk39	ENSMUST00000123781	retained_intron		2	-1	68471940	2038
ENSMUSG00000107148	TEC	Gm42888	ENSMUST00000202425	TEC		5	-1	69316067	4361
ENSMUSG00000024924	protein_coding	Vldlr	ENSMUST00000164509	retained_intron		19	1	27216484	4895
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000022767	protein_coding	principal1	14	-1	52305128	2025
ENSMUSG00000027030	protein_coding	Stk39	ENSMUST00000149581	processed_transcript		2	-1	68386681	737
ENSMUSG00000107234	TEC	Gm43371	ENSMUST00000202838	TEC		5	-1	69182113	1031
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000174351	nonsense_mediated_decay		14	-1	52300348	1469
ENSMUSG00000037653	protein_coding	Kctd8	ENSMUST00000054095	protein_coding	principal2	5	-1	69341679	2859
ENSMUSG00000075480	TEC	Gm10840	ENSMUST00000238639	TEC		11	1	106160193	965
ENSMUSG00000028295	protein_coding	Smim8	ENSMUST00000108132	protein_coding	principal1	4	-1	34778270	864
ENSMUSG00000075480	TEC	Gm10840	ENSMUST00000100326	TEC		11	1	106160850	309
ENSMUSG00000034224	protein_coding	Slc38a8	ENSMUST00000132838	processed_transcript		8	-1	119496987	869
ENSMUSG00000031750	protein_coding	Il34	ENSMUST00000076846	protein_coding	principal1	8	-1	110805903	1709
ENSMUSG00000034224	protein_coding	Slc38a8	ENSMUST00000125594	retained_intron		8	-1	119494895	899
ENSMUSG00000034224	protein_coding	Slc38a8	ENSMUST00000138061	protein_coding		8	-1	119501294	724
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000173546	retained_intron		14	-1	52296669	504
ENSMUSG00000037653	protein_coding	Kctd8	ENSMUST00000087231	protein_coding	alternative2	5	-1	69341677	1860
ENSMUSG00000090641	protein_coding	Zfp712	ENSMUST00000167565	protein_coding	principal1	13	-1	67061170	3968
ENSMUSG00000028295	protein_coding	Smim8	ENSMUST00000108133	protein_coding	principal1	4	-1	34778337	935
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000174360	protein_coding		14	-1	52296751	438
ENSMUSG00000034224	protein_coding	Slc38a8	ENSMUST00000133821	protein_coding		8	-1	119501695	719
ENSMUSG00000107312	TEC	Gm43229	ENSMUST00000201812	TEC		5	-1	69277570	1850
ENSMUSG00000107363	TEC	Gm43373	ENSMUST00000202552	TEC		5	-1	69220290	2870
ENSMUSG00000028295	protein_coding	Smim8	ENSMUST00000108131	protein_coding	principal1	4	-1	34778349	892
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000173656	protein_coding		14	-1	52296752	392
ENSMUSG00000114834	processed_pseudogene	Gm48705	ENSMUST00000223867	processed_pseudogene		13	1	67050735	291
ENSMUSG00000107208	TEC	D130004A15Rik	ENSMUST00000201492	TEC		5	-1	69170248	1577
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000147768	nonsense_mediated_decay		14	-1	52305124	2159
ENSMUSG00000106753	TEC	Gm43230	ENSMUST00000200980	TEC		5	-1	69265713	2129
ENSMUSG00000028295	protein_coding	Smim8	ENSMUST00000108134	protein_coding	principal1	4	-1	34778364	782
ENSMUSG00000106673	TEC	Gm43374	ENSMUST00000202498	TEC		5	-1	69224235	2391
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000130550	retained_intron		14	-1	52296762	727
ENSMUSG00000031750	protein_coding	Il34	ENSMUST00000150680	protein_coding		8	-1	110805872	1796
ENSMUSG00000028295	protein_coding	Smim8	ENSMUST00000029972	protein_coding	principal1	4	-1	34778423	786
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000156611	retained_intron		14	-1	52298456	927
ENSMUSG00000031750	protein_coding	Il34	ENSMUST00000137362	processed_transcript		8	-1	110805924	309
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000127797	retained_intron		14	-1	52299776	963
ENSMUSG00000028295	protein_coding	Smim8	ENSMUST00000139922	processed_transcript		4	-1	34778331	526
ENSMUSG00000031750	protein_coding	Il34	ENSMUST00000154803	processed_transcript		8	-1	110742698	675
ENSMUSG00000028295	protein_coding	Smim8	ENSMUST00000147396	retained_intron		4	-1	34778355	780
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000232920	processed_transcript		17	1	28328584	384
ENSMUSG00000031750	protein_coding	Il34	ENSMUST00000148732	processed_transcript		8	-1	110790888	515
ENSMUSG00000028295	protein_coding	Smim8	ENSMUST00000131295	processed_transcript		4	-1	34778218	288
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000122962	nonsense_mediated_decay		14	-1	52305086	1708
ENSMUSG00000000627	protein_coding	Sema4f	ENSMUST00000000641	protein_coding	principal1	6	-1	82939769	4086
ENSMUSG00000090039	antisense	Gm15894	ENSMUST00000162828	antisense		8	1	110754992	2067
ENSMUSG00000101961	lincRNA	Gm28220	ENSMUST00000189607	lincRNA		Y	1	85999759	1500
ENSMUSG00000101961	lincRNA	Gm28220	ENSMUST00000190253	lincRNA		Y	1	86000211	440
ENSMUSG00000000627	protein_coding	Sema4f	ENSMUST00000125579	processed_transcript		6	-1	82917586	345
ENSMUSG00000100235	protein_coding	Gm28557	ENSMUST00000186303	nonsense_mediated_decay	principal1	13	-1	67108549	3886
ENSMUSG00000036067	protein_coding	Slc2a6	ENSMUST00000102890	protein_coding	alternative2	2	-1	27027909	1887
ENSMUSG00000035093	protein_coding	Secisbp2l	ENSMUST00000053699	protein_coding	principal1	2	-1	125782870	6797
ENSMUSG00000035390	protein_coding	Brsk1	ENSMUST00000120836	protein_coding		7	1	4690604	2867
ENSMUSG00000086621	antisense	Gm13348	ENSMUST00000147324	antisense		2	-1	19636986	690
ENSMUSG00000080227	processed_pseudogene	Gm13343	ENSMUST00000116474	processed_pseudogene		2	-1	19652348	105
ENSMUSG00000001918	protein_coding	Slc1a5	ENSMUST00000108496	protein_coding	principal1	7	1	16781340	2764
ENSMUSG00000035093	protein_coding	Secisbp2l	ENSMUST00000139944	protein_coding		2	-1	125760314	2295
ENSMUSG00000100235	protein_coding	Gm28557	ENSMUST00000185856	processed_transcript		13	-1	67098088	788
ENSMUSG00000020527	protein_coding	Myo19	ENSMUST00000141705	processed_transcript		11	1	84880220	5360
ENSMUSG00000040699	protein_coding	Limd2	ENSMUST00000045923	protein_coding	principal1	11	-1	106160142	2950
ENSMUSG00000035093	protein_coding	Secisbp2l	ENSMUST00000136450	retained_intron		2	-1	125752264	600
ENSMUSG00000100235	protein_coding	Gm28557	ENSMUST00000185954	processed_transcript		13	-1	67097975	570
ENSMUSG00000020527	protein_coding	Myo19	ENSMUST00000124475	processed_transcript		11	1	84880310	416
ENSMUSG00000100235	protein_coding	Gm28557	ENSMUST00000225558	retained_intron		13	-1	67108594	346
ENSMUSG00000040699	protein_coding	Limd2	ENSMUST00000138094	processed_transcript		11	-1	106159409	908
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000173896	nonsense_mediated_decay		14	-1	52304987	1091
ENSMUSG00000020527	protein_coding	Myo19	ENSMUST00000124152	processed_transcript		11	1	84880353	3644
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000173138	nonsense_mediated_decay		14	-1	52304987	667
ENSMUSG00000100235	protein_coding	Gm28557	ENSMUST00000187652	processed_transcript		13	-1	67108604	1100
ENSMUSG00000040699	protein_coding	Limd2	ENSMUST00000064545	protein_coding	principal1	11	-1	106159927	798
ENSMUSG00000036067	protein_coding	Slc2a6	ENSMUST00000145742	processed_transcript		2	-1	27027922	2347
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000174853	protein_coding		14	-1	52305107	857
ENSMUSG00000020527	protein_coding	Myo19	ENSMUST00000020837	protein_coding		11	1	84880367	1669
ENSMUSG00000040699	protein_coding	Limd2	ENSMUST00000106875	protein_coding	principal1	11	-1	106160860	936
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000145875	nonsense_mediated_decay		14	-1	52305099	330
ENSMUSG00000036067	protein_coding	Slc2a6	ENSMUST00000129835	processed_transcript		2	-1	27027946	2711
ENSMUSG00000020527	protein_coding	Myo19	ENSMUST00000141173	processed_transcript		11	1	84882586	3651
ENSMUSG00000022160	protein_coding	Mettl3	ENSMUST00000197394	retained_intron		14	-1	52305124	1504
ENSMUSG00000084407	unprocessed_pseudogene	Gm14018	ENSMUST00000119042	unprocessed_pseudogene		2	1	121485432	455
ENSMUSG00000024924	protein_coding	Vldlr	ENSMUST00000164746	protein_coding		19	1	27217020	454
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000129935	nonsense_mediated_decay		17	1	28328584	949
ENSMUSG00000074824	protein_coding	Rslcan18	ENSMUST00000091526	protein_coding	principal1	13	-1	67114028	2981
ENSMUSG00000035390	protein_coding	Brsk1	ENSMUST00000048248	protein_coding	principal1	7	1	4690928	2996
ENSMUSG00000074378	protein_coding	Bsph1	ENSMUST00000098811	protein_coding	principal3	7	1	13450841	822
ENSMUSG00000074824	protein_coding	Rslcan18	ENSMUST00000189620	retained_intron		13	-1	67116263	5249
ENSMUSG00000029309	protein_coding	Sparcl1	ENSMUST00000031249	protein_coding	principal1	5	-1	104113733	2759
ENSMUSG00000114516	antisense	Gm46440	ENSMUST00000224641	antisense		13	1	67060505	1475
ENSMUSG00000045140	protein_coding	Pigw	ENSMUST00000067058	protein_coding	principal1	11	-1	84880195	2675
ENSMUSG00000114516	antisense	Gm46440	ENSMUST00000223904	antisense		13	1	67060801	1536
ENSMUSG00000114516	antisense	Gm46440	ENSMUST00000223556	antisense		13	1	67061227	447
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000152665	retained_intron		17	1	28328586	901
ENSMUSG00000099971	antisense	Gm28287	ENSMUST00000186612	antisense		1	1	21080114	546
ENSMUSG00000062825	protein_coding	Actg1	ENSMUST00000071555	protein_coding	principal1	11	-1	120348542	1952
ENSMUSG00000074378	protein_coding	Bsph1	ENSMUST00000204715	protein_coding	alternative2	7	1	13450856	707
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000233842	processed_transcript		17	1	28328591	423
ENSMUSG00000001918	protein_coding	Slc1a5	ENSMUST00000127401	retained_intron		7	1	16781368	2807
ENSMUSG00000090464	antisense	Gm17140	ENSMUST00000169163	antisense		15	-1	66744327	627
ENSMUSG00000029309	protein_coding	Sparcl1	ENSMUST00000199947	protein_coding		5	-1	104113439	969
ENSMUSG00000036067	protein_coding	Slc2a6	ENSMUST00000045702	protein_coding	principal3	2	-1	27027998	2138
ENSMUSG00000035390	protein_coding	Brsk1	ENSMUST00000206024	protein_coding		7	1	4691080	1216
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000232867	protein_coding		17	1	28328597	511
ENSMUSG00000001918	protein_coding	Slc1a5	ENSMUST00000206444	retained_intron		7	1	16782398	475
ENSMUSG00000062825	protein_coding	Actg1	ENSMUST00000062147	protein_coding		11	-1	120348475	876
ENSMUSG00000003863	protein_coding	Ppfia3	ENSMUST00000211067	protein_coding	principal1	7	-1	45366714	4565
ENSMUSG00000001127	protein_coding	Araf	ENSMUST00000136451	nonsense_mediated_decay		X	1	20797814	2439
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000233852	retained_intron		17	1	28328599	693
ENSMUSG00000035390	protein_coding	Brsk1	ENSMUST00000205666	protein_coding		7	1	4692243	1398
ENSMUSG00000097877	antisense	Gm26703	ENSMUST00000181370	antisense		5	1	104109217	2864
ENSMUSG00000062825	protein_coding	Actg1	ENSMUST00000089616	protein_coding		11	-1	120346977	326
ENSMUSG00000036067	protein_coding	Slc2a6	ENSMUST00000135725	processed_transcript		2	-1	27025991	668
ENSMUSG00000097877	antisense	Gm26703	ENSMUST00000198250	antisense		5	1	104109291	975
ENSMUSG00000001918	protein_coding	Slc1a5	ENSMUST00000135817	processed_transcript		7	1	16784738	416
ENSMUSG00000035390	protein_coding	Brsk1	ENSMUST00000123637	protein_coding		7	1	4708978	610
ENSMUSG00000043415	protein_coding	Otud1	ENSMUST00000052168	protein_coding	principal1	2	1	19657752	2832
ENSMUSG00000001918	protein_coding	Slc1a5	ENSMUST00000131664	retained_intron		7	1	16785666	396
ENSMUSG00000036067	protein_coding	Slc2a6	ENSMUST00000153388	protein_coding		2	-1	27027991	343
ENSMUSG00000045140	protein_coding	Pigw	ENSMUST00000108080	protein_coding	principal1	11	-1	84880285	1728
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000150103	retained_intron		17	1	28328600	1022
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000232770	retained_intron		17	1	28328616	1202
ENSMUSG00000101484	lincRNA	Gm28798	ENSMUST00000186372	lincRNA		Y	1	28143148	2161
ENSMUSG00000097877	antisense	Gm26703	ENSMUST00000181506	antisense		5	1	104113888	2982
ENSMUSG00000114512	lincRNA	Gm47348	ENSMUST00000226065	lincRNA		13	1	39440565	3782
ENSMUSG00000100587	unprocessed_pseudogene	Gm28797	ENSMUST00000188543	unprocessed_pseudogene		Y	1	28147893	315
ENSMUSG00000001918	protein_coding	Slc1a5	ENSMUST00000147814	retained_intron		7	1	16786371	853
ENSMUSG00000083893	processed_pseudogene	Gm13347	ENSMUST00000120298	processed_pseudogene		2	1	19677251	1353
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000143443	retained_intron		17	1	28328647	873
ENSMUSG00000001918	protein_coding	Slc1a5	ENSMUST00000134407	processed_transcript		7	1	16793027	613
ENSMUSG00000003863	protein_coding	Ppfia3	ENSMUST00000211098	retained_intron		7	-1	45341160	1467
ENSMUSG00000037805	protein_coding	Rpl10a	ENSMUST00000141049	retained_intron		17	1	28329278	1618
ENSMUSG00000070853	protein_coding	Olfr1150-ps1	ENSMUST00000121186	protein_coding	principal1	2	1	87843993	3311
ENSMUSG00000062825	protein_coding	Actg1	ENSMUST00000131103	nonsense_mediated_decay		11	-1	120348489	1189
ENSMUSG00000112224	lincRNA	Gm47944	ENSMUST00000217911	lincRNA		10	-1	78519908	373
ENSMUSG00000112224	lincRNA	Gm47944	ENSMUST00000220385	lincRNA		10	-1	78520219	824
ENSMUSG00000087246	lincRNA	Gm13346	ENSMUST00000135767	lincRNA		2	-1	19686157	3634
ENSMUSG00000014301	protein_coding	Pam16	ENSMUST00000131250	retained_intron		16	-1	4616988	346
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000161620	protein_coding	alternative2	2	1	129592839	3824
ENSMUSG00000001918	protein_coding	Slc1a5	ENSMUST00000141349	retained_intron		7	1	16793177	890
ENSMUSG00000003863	protein_coding	Ppfia3	ENSMUST00000003961	protein_coding	principal1	7	-1	45366801	4647
ENSMUSG00000107822	protein_coding	Olfr1358	ENSMUST00000204477	protein_coding	principal1	10	1	78517428	1064
ENSMUSG00000062825	protein_coding	Actg1	ENSMUST00000128055	protein_coding		11	-1	120348479	1021
ENSMUSG00000117681	processed_pseudogene	Gm50198	ENSMUST00000236672	processed_pseudogene		19	-1	6331453	400
ENSMUSG00000054115	protein_coding	Skp2	ENSMUST00000096482	protein_coding	principal1	15	-1	9140365	3118
ENSMUSG00000112313	processed_pseudogene	Gm5951	ENSMUST00000220283	processed_pseudogene		10	1	78543276	504
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000136554	processed_transcript		2	1	129592865	400
ENSMUSG00000118597	unprocessed_pseudogene	AC134836.1	ENSMUST00000239318	unprocessed_pseudogene		6	1	142173368	476
ENSMUSG00000092488	processed_pseudogene	Gm18159	ENSMUST00000174516	processed_pseudogene		6	1	142110456	1070
ENSMUSG00000062825	protein_coding	Actg1	ENSMUST00000141406	retained_intron		11	-1	120348469	864
ENSMUSG00000092500	antisense	Gm20400	ENSMUST00000173695	antisense		6	1	142161493	665
ENSMUSG00000014301	protein_coding	Pam16	ENSMUST00000156889	nonsense_mediated_decay		16	-1	4624936	431
ENSMUSG00000003863	protein_coding	Ppfia3	ENSMUST00000210586	retained_intron		7	-1	45367019	4893
ENSMUSG00000003863	protein_coding	Ppfia3	ENSMUST00000210248	protein_coding		7	-1	45360113	3899
ENSMUSG00000062825	protein_coding	Actg1	ENSMUST00000156343	retained_intron		11	-1	120348485	807
ENSMUSG00000063804	protein_coding	Lin28b	ENSMUST00000079390	protein_coding	principal1	10	-1	45470201	5402
ENSMUSG00000054115	protein_coding	Skp2	ENSMUST00000110585	protein_coding		15	-1	9140439	6185
ENSMUSG00000062825	protein_coding	Actg1	ENSMUST00000144868	retained_intron		11	-1	120348495	449
ENSMUSG00000003863	protein_coding	Ppfia3	ENSMUST00000210844	retained_intron		7	-1	45340762	1060
ENSMUSG00000003863	protein_coding	Ppfia3	ENSMUST00000209424	retained_intron		7	-1	45366964	2909
ENSMUSG00000054115	protein_coding	Skp2	ENSMUST00000190131	protein_coding		15	-1	9155424	1819
ENSMUSG00000091510	antisense	Mtag2	ENSMUST00000211463	antisense		7	1	45366163	685
ENSMUSG00000062825	protein_coding	Actg1	ENSMUST00000106215	protein_coding	principal1	11	-1	120348091	1827
ENSMUSG00000063804	protein_coding	Lin28b	ENSMUST00000215708	processed_transcript		10	-1	45486395	1382
ENSMUSG00000091510	antisense	Mtag2	ENSMUST00000058665	pseudogene		7	1	45367233	714
ENSMUSG00000063804	protein_coding	Lin28b	ENSMUST00000214555	processed_transcript		10	-1	45485777	2902
ENSMUSG00000110070	lincRNA	Gm45619	ENSMUST00000210360	lincRNA		7	1	45368177	528
ENSMUSG00000028786	protein_coding	Tmem54	ENSMUST00000106064	protein_coding	principal3	4	1	129105548	1066
ENSMUSG00000066640	protein_coding	Fbxl18	ENSMUST00000110766	protein_coding	alternative2	5	-1	142895421	7857
ENSMUSG00000026456	protein_coding	Cyb5r1	ENSMUST00000186489	processed_transcript		1	1	134405559	875
ENSMUSG00000114821	lincRNA	Gm3509	ENSMUST00000224413	lincRNA		13	-1	39467017	733
ENSMUSG00000054115	protein_coding	Skp2	ENSMUST00000191316	retained_intron		15	-1	9140352	1391
ENSMUSG00000066640	protein_coding	Fbxl18	ENSMUST00000199067	retained_intron		5	-1	142872884	1109
ENSMUSG00000054115	protein_coding	Skp2	ENSMUST00000190406	processed_transcript		15	-1	9155425	852
ENSMUSG00000066640	protein_coding	Fbxl18	ENSMUST00000197596	processed_transcript		5	-1	142872493	308
ENSMUSG00000109832	unprocessed_pseudogene	Olfr662-ps1	ENSMUST00000210704	unprocessed_pseudogene		7	1	104700257	396
ENSMUSG00000014301	protein_coding	Pam16	ENSMUST00000014445	protein_coding	principal1	16	-1	4624988	596
ENSMUSG00000066640	protein_coding	Fbxl18	ENSMUST00000156725	retained_intron		5	-1	142895421	6769
ENSMUSG00000109806	polymorphic_pseudogene	Olfr663	ENSMUST00000209914	polymorphic_pseudogene	principal1	7	1	104703569	959
ENSMUSG00000028786	protein_coding	Tmem54	ENSMUST00000030575	protein_coding		4	1	129105574	1064
ENSMUSG00000066640	protein_coding	Fbxl18	ENSMUST00000035985	protein_coding	principal2	5	-1	142895238	2831
ENSMUSG00000014301	protein_coding	Pam16	ENSMUST00000139534	retained_intron		16	-1	4618154	471
ENSMUSG00000014301	protein_coding	Pam16	ENSMUST00000229767	retained_intron		16	-1	4624906	1634
ENSMUSG00000097559	sense_intronic	D430018E03Rik	ENSMUST00000181842	sense_intronic		5	-1	142878373	3832
ENSMUSG00000028786	protein_coding	Tmem54	ENSMUST00000030577	protein_coding	alternative2	4	1	129105601	988
ENSMUSG00000028786	protein_coding	Tmem54	ENSMUST00000148979	protein_coding		4	1	129106869	341
ENSMUSG00000070717	antisense	Gm10300	ENSMUST00000094662	antisense		4	1	132074697	2296
ENSMUSG00000084869	lincRNA	Gm13063	ENSMUST00000132247	lincRNA		4	1	132048178	669
ENSMUSG00000021250	protein_coding	Fos	ENSMUST00000021674	protein_coding	principal1	12	1	85473890	2108
ENSMUSG00000104301	protein_coding	Wdr49	ENSMUST00000193989	protein_coding	principal1	3	-1	75481740	2413
ENSMUSG00000075270	protein_coding	Pde11a	ENSMUST00000099992	protein_coding	principal1	2	-1	76338774	4189
ENSMUSG00000021250	protein_coding	Fos	ENSMUST00000134311	processed_transcript		12	1	85474911	631
ENSMUSG00000075270	protein_coding	Pde11a	ENSMUST00000144892	protein_coding		2	-1	76215394	1496
ENSMUSG00000021250	protein_coding	Fos	ENSMUST00000140525	processed_transcript		12	1	85474691	834
ENSMUSG00000014303	protein_coding	Glis2	ENSMUST00000014447	protein_coding	principal1	16	1	4594713	3619
ENSMUSG00000033107	protein_coding	Rnf125	ENSMUST00000050004	protein_coding		18	1	20944625	1348
ENSMUSG00000104301	protein_coding	Wdr49	ENSMUST00000203169	protein_coding		3	-1	75481741	1584
ENSMUSG00000021250	protein_coding	Fos	ENSMUST00000136122	processed_transcript		12	1	85474691	795
ENSMUSG00000075270	protein_coding	Pde11a	ENSMUST00000124825	protein_coding		2	-1	76006043	2209
ENSMUSG00000000627	protein_coding	Sema4f	ENSMUST00000203911	retained_intron		6	-1	82939769	2907
ENSMUSG00000031495	protein_coding	Cd209d	ENSMUST00000011445	protein_coding	principal2	8	-1	3878555	919
ENSMUSG00000014303	protein_coding	Glis2	ENSMUST00000141682	protein_coding		16	1	4601163	418
ENSMUSG00000104301	protein_coding	Wdr49	ENSMUST00000204982	retained_intron		3	-1	75482156	2546
ENSMUSG00000033107	protein_coding	Rnf125	ENSMUST00000234316	protein_coding	principal1	18	1	20961472	1406
ENSMUSG00000000627	protein_coding	Sema4f	ENSMUST00000203271	nonsense_mediated_decay		6	-1	82939545	771
ENSMUSG00000104301	protein_coding	Wdr49	ENSMUST00000204341	protein_coding		3	-1	75451818	1344
ENSMUSG00000103444	processed_pseudogene	Gm17836	ENSMUST00000191976	processed_pseudogene		3	1	75391319	1302
ENSMUSG00000110624	lincRNA	Gm32052	ENSMUST00000212073	lincRNA		8	-1	48009133	799
ENSMUSG00000100001	lincRNA	1810007D17Rik	ENSMUST00000187629	lincRNA		19	1	58606329	742
ENSMUSG00000107687	processed_pseudogene	Gm44254	ENSMUST00000204184	processed_pseudogene		7	1	13480749	322
ENSMUSG00000031495	protein_coding	Cd209d	ENSMUST00000209176	protein_coding	alternative2	8	-1	3878495	672
ENSMUSG00000019368	protein_coding	Sec14l4	ENSMUST00000129689	processed_transcript		11	1	4031462	653
ENSMUSG00000014303	protein_coding	Glis2	ENSMUST00000122896	retained_intron		16	1	4608627	3512
ENSMUSG00000014303	protein_coding	Glis2	ENSMUST00000135577	retained_intron		16	1	4611410	655
ENSMUSG00000019368	protein_coding	Sec14l4	ENSMUST00000137324	processed_transcript		11	1	4031465	746
ENSMUSG00000014303	protein_coding	Glis2	ENSMUST00000127120	processed_transcript		16	1	4611628	711
ENSMUSG00000019368	protein_coding	Sec14l4	ENSMUST00000126423	processed_transcript		11	1	4031613	644
ENSMUSG00000100819	unprocessed_pseudogene	Gm2693	ENSMUST00000189119	unprocessed_pseudogene		1	1	21178988	571
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000168110	protein_coding	alternative2	10	-1	93081618	9903
ENSMUSG00000079262	protein_coding	Slco1a6	ENSMUST00000111827	protein_coding	principal1	6	-1	142186153	2815
ENSMUSG00000019368	protein_coding	Sec14l4	ENSMUST00000131171	processed_transcript		11	1	4031783	1232
ENSMUSG00000001127	protein_coding	Araf	ENSMUST00000001155	protein_coding	principal1	X	1	20848543	2358
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000212902	protein_coding	principal5	10	-1	93081596	9516
ENSMUSG00000094305	protein_coding	Scgb2b20	ENSMUST00000179248	protein_coding	principal1	7	-1	33366322	523
ENSMUSG00000100240	protein_coding	Gm20820	ENSMUST00000188754	protein_coding	principal1	Y	1	86061772	921
ENSMUSG00000040488	protein_coding	Ltbp4	ENSMUST00000038618	protein_coding	principal3	7	-1	27337692	5386
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000163209	nonsense_mediated_decay		10	-1	92836346	2199
ENSMUSG00000079262	protein_coding	Slco1a6	ENSMUST00000172984	retained_intron		6	-1	142186149	1184
ENSMUSG00000079262	protein_coding	Slco1a6	ENSMUST00000173877	processed_transcript		6	-1	142157298	458
ENSMUSG00000110544	processed_pseudogene	Gm2607	ENSMUST00000212389	processed_pseudogene		8	-1	48070628	627
ENSMUSG00000098644	unprocessed_pseudogene	Bsph2-ps	ENSMUST00000183795	unprocessed_pseudogene		7	1	13525633	241
ENSMUSG00000079262	protein_coding	Slco1a6	ENSMUST00000174455	protein_coding		6	-1	142208521	564
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000067705	nonsense_mediated_decay		10	-1	92940289	3191
ENSMUSG00000047039	protein_coding	Olfr1151	ENSMUST00000217376	protein_coding	principal1	2	1	87855862	2866
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000170065	nonsense_mediated_decay		10	-1	93034821	2080
ENSMUSG00000033147	protein_coding	Slc22a15	ENSMUST00000106928	protein_coding	principal1	3	-1	101924393	6573
ENSMUSG00000094978	protein_coding	Scgb1b20	ENSMUST00000166714	protein_coding	principal1	7	1	33373234	421
ENSMUSG00000040488	protein_coding	Ltbp4	ENSMUST00000121175	protein_coding	alternative2	7	-1	27333663	5118
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000165090	processed_transcript		10	-1	93025117	464
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000220280	protein_coding		10	-1	93032962	480
ENSMUSG00000047039	protein_coding	Olfr1151	ENSMUST00000061081	protein_coding	principal1	2	1	87857177	927
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000168617	protein_coding		10	-1	93081596	1794
ENSMUSG00000028785	protein_coding	Hpca	ENSMUST00000095807	protein_coding	principal1	4	-1	129118967	1666
ENSMUSG00000114712	processed_pseudogene	Gm47569	ENSMUST00000224555	processed_pseudogene		13	-1	114436699	811
ENSMUSG00000098080	processed_pseudogene	Gm5732	ENSMUST00000182596	processed_pseudogene		7	1	33402819	1007
ENSMUSG00000114520	processed_pseudogene	Gm41073	ENSMUST00000224609	processed_pseudogene		13	-1	114438214	422
ENSMUSG00000101027	processed_pseudogene	Gm28794	ENSMUST00000185276	processed_pseudogene		7	-1	33423574	136
ENSMUSG00000033147	protein_coding	Slc22a15	ENSMUST00000190824	protein_coding		3	-1	101924449	3010
ENSMUSG00000040488	protein_coding	Ltbp4	ENSMUST00000118583	protein_coding	alternative2	7	-1	27333613	4726
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000103203	protein_coding	principal3	2	1	129592914	3674
ENSMUSG00000040488	protein_coding	Ltbp4	ENSMUST00000134464	retained_intron		7	-1	27306970	550
ENSMUSG00000045225	protein_coding	Olfr1152	ENSMUST00000213308	protein_coding	principal1	2	1	87866492	6201
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000037488	protein_coding	principal2	12	1	40445952	8552
ENSMUSG00000040488	protein_coding	Ltbp4	ENSMUST00000125455	protein_coding		7	-1	27310659	684
ENSMUSG00000118636	transcribed_unitary_pseudogene	AC117663.3	ENSMUST00000239171	transcribed_unitary_pseudogene		5	-1	23823578	239
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000168080	retained_intron		10	-1	93081618	1160
ENSMUSG00000118627	transcribed_processed_pseudogene	AC117663.2	ENSMUST00000126393	transcribed_processed_pseudogene		5	-1	23831623	544
ENSMUSG00000045225	protein_coding	Olfr1152	ENSMUST00000051058	protein_coding	principal1	2	1	87867993	933
ENSMUSG00000082056	processed_pseudogene	Gm13745	ENSMUST00000121994	processed_pseudogene		2	1	87871681	527
ENSMUSG00000104569	TEC	Gm43054	ENSMUST00000199495	TEC		5	1	23790702	884
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000171781	processed_transcript		10	-1	93070251	431
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000079461	protein_coding	principal2	17	-1	25861475	5991
ENSMUSG00000026942	protein_coding	Traf2	ENSMUST00000028311	protein_coding	principal3	2	-1	25546940	3044
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000020200	protein_coding	alternative2	10	-1	93081618	2473
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000103202	protein_coding	principal3	2	1	129593205	3982
ENSMUSG00000020014	protein_coding	Cfap54	ENSMUST00000164979	protein_coding		10	-1	92940297	945
ENSMUSG00000033147	protein_coding	Slc22a15	ENSMUST00000182130	processed_transcript		3	-1	101896870	2616
ENSMUSG00000040488	protein_coding	Ltbp4	ENSMUST00000148594	retained_intron		7	-1	27310678	867
ENSMUSG00000028082	protein_coding	Sh3d19	ENSMUST00000238443	protein_coding	alternative2	3	1	85971109	7217
ENSMUSG00000033147	protein_coding	Slc22a15	ENSMUST00000183293	retained_intron		3	-1	101877887	700
ENSMUSG00000081834	processed_pseudogene	Gm13770	ENSMUST00000117149	processed_pseudogene		2	-1	91523884	305
ENSMUSG00000021816	protein_coding	Ppp3cb	ENSMUST00000159027	protein_coding	principal3	14	-1	20546573	3831
ENSMUSG00000040488	protein_coding	Ltbp4	ENSMUST00000129471	retained_intron		7	-1	27310462	518
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000049262	protein_coding	alternative2	2	1	129593555	3644
ENSMUSG00000025933	protein_coding	Tmem14a	ENSMUST00000027065	protein_coding	principal3	1	1	21218575	1168
ENSMUSG00000033147	protein_coding	Slc22a15	ENSMUST00000183255	nonsense_mediated_decay		3	-1	101924379	2265
ENSMUSG00000033147	protein_coding	Slc22a15	ENSMUST00000183098	retained_intron		3	-1	101876614	4966
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000176923	protein_coding	alternative2	17	-1	25861501	5962
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000160952	processed_transcript		2	1	129593562	430
ENSMUSG00000026942	protein_coding	Traf2	ENSMUST00000151742	retained_intron		2	-1	25539140	4117
ENSMUSG00000093880	unprocessed_pseudogene	Tmem181c-ps	ENSMUST00000115772	unprocessed_pseudogene		17	-1	6639790	1386
ENSMUSG00000001127	protein_coding	Araf	ENSMUST00000152955	retained_intron		X	1	20848564	2581
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000163034	protein_coding		2	1	129593568	677
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000176575	retained_intron		17	-1	25861468	6195
ENSMUSG00000033147	protein_coding	Slc22a15	ENSMUST00000182040	processed_transcript		3	-1	101924453	1907
ENSMUSG00000034164	protein_coding	Emid1	ENSMUST00000062821	protein_coding	principal2	11	-1	5152257	1947
ENSMUSG00000025933	protein_coding	Tmem14a	ENSMUST00000027064	protein_coding	alternative2	1	1	21218662	1261
ENSMUSG00000001127	protein_coding	Araf	ENSMUST00000122312	protein_coding		X	1	20848566	2854
ENSMUSG00000021816	protein_coding	Ppp3cb	ENSMUST00000161445	protein_coding	alternative1	14	-1	20546547	3298
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000235437	protein_coding		17	-1	25846581	1237
ENSMUSG00000001127	protein_coding	Araf	ENSMUST00000148032	processed_transcript		X	1	20848575	1474
ENSMUSG00000028441	protein_coding	1110017D15Rik	ENSMUST00000123356	processed_transcript		4	-1	41507754	652
ENSMUSG00000095677	protein_coding	Dynlt1f	ENSMUST00000232452	retained_intron		17	-1	6655818	3545
ENSMUSG00000026942	protein_coding	Traf2	ENSMUST00000114234	protein_coding	alternative2	2	-1	25546910	2151
ENSMUSG00000040488	protein_coding	Ltbp4	ENSMUST00000206413	processed_transcript		7	-1	27333648	3643
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000176983	retained_intron		17	-1	25846494	722
ENSMUSG00000028441	protein_coding	1110017D15Rik	ENSMUST00000123865	processed_transcript		4	-1	41507759	486
ENSMUSG00000021816	protein_coding	Ppp3cb	ENSMUST00000022355	protein_coding	alternative1	14	-1	20546512	3074
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000160276	protein_coding		2	1	129593613	876
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000176170	retained_intron		17	-1	25851760	1352
ENSMUSG00000021816	protein_coding	Ppp3cb	ENSMUST00000162217	retained_intron		14	-1	20503770	635
ENSMUSG00000034164	protein_coding	Emid1	ENSMUST00000132328	protein_coding		11	-1	5130778	1248
ENSMUSG00000028999	protein_coding	Rint1	ENSMUST00000120869	protein_coding		5	1	23787711	1886
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000177340	retained_intron		17	-1	25851867	748
ENSMUSG00000034164	protein_coding	Emid1	ENSMUST00000156492	nonsense_mediated_decay		11	-1	5152237	639
ENSMUSG00000028441	protein_coding	1110017D15Rik	ENSMUST00000124019	processed_transcript		4	-1	41507764	721
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000177017	retained_intron		17	-1	25853890	628
ENSMUSG00000028082	protein_coding	Sh3d19	ENSMUST00000238331	protein_coding	principal2	3	1	86038877	7025
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000162764	retained_intron		2	1	129620685	642
ENSMUSG00000040488	protein_coding	Ltbp4	ENSMUST00000108369	protein_coding	alternative2	7	-1	27337692	5377
ENSMUSG00000034164	protein_coding	Emid1	ENSMUST00000153308	nonsense_mediated_decay		11	-1	5129063	362
ENSMUSG00000028082	protein_coding	Sh3d19	ENSMUST00000238222	protein_coding	principal2	3	1	86040499	7228
ENSMUSG00000111231	TEC	Gm47054	ENSMUST00000214665	TEC		10	-1	36614074	2175
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000177031	retained_intron		17	-1	25861475	4535
ENSMUSG00000034164	protein_coding	Emid1	ENSMUST00000151906	protein_coding		11	-1	5129480	1061
ENSMUSG00000021816	protein_coding	Ppp3cb	ENSMUST00000161989	protein_coding		14	-1	20546440	2322
ENSMUSG00000001127	protein_coding	Araf	ENSMUST00000120356	protein_coding		X	1	20848578	1520
ENSMUSG00000028082	protein_coding	Sh3d19	ENSMUST00000238545	protein_coding	alternative2	3	1	86040723	7044
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000099113	protein_coding		2	1	129593195	3342
ENSMUSG00000021816	protein_coding	Ppp3cb	ENSMUST00000162107	retained_intron		14	-1	20516016	546
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000176963	retained_intron		17	-1	25855294	667
ENSMUSG00000028082	protein_coding	Sh3d19	ENSMUST00000182666	protein_coding	principal2	3	1	86070915	6886
ENSMUSG00000037902	protein_coding	Sirpa	ENSMUST00000179001	protein_coding	principal3	2	1	129592839	3812
ENSMUSG00000034164	protein_coding	Emid1	ENSMUST00000132196	retained_intron		11	-1	5129242	649
ENSMUSG00000004947	protein_coding	Dtx2	ENSMUST00000111142	protein_coding	alternative1	5	1	135994800	2650
ENSMUSG00000019368	protein_coding	Sec14l4	ENSMUST00000019512	protein_coding	principal1	11	1	4031783	2956
ENSMUSG00000021816	protein_coding	Ppp3cb	ENSMUST00000223854	retained_intron		14	-1	20518807	3360
ENSMUSG00000073434	protein_coding	Wdr90	ENSMUST00000176678	protein_coding		17	-1	25859226	541
ENSMUSG00000001127	protein_coding	Araf	ENSMUST00000150190	retained_intron		X	1	20848582	550
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000222860	retained_intron		12	1	40446036	2245
ENSMUSG00000052783	protein_coding	Grk4	ENSMUST00000074651	protein_coding		5	1	34660379	3234
ENSMUSG00000028082	protein_coding	Sh3d19	ENSMUST00000238606	protein_coding	alternative2	3	1	86084490	2623
ENSMUSG00000028785	protein_coding	Hpca	ENSMUST00000116444	protein_coding	principal1	4	-1	129122036	1847
ENSMUSG00000028082	protein_coding	Sh3d19	ENSMUST00000183202	retained_intron		3	1	86125329	3782
ENSMUSG00000001127	protein_coding	Araf	ENSMUST00000122850	protein_coding		X	1	20848589	826
ENSMUSG00000034164	protein_coding	Emid1	ENSMUST00000138551	processed_transcript		11	-1	5150284	605
ENSMUSG00000095677	protein_coding	Dynlt1f	ENSMUST00000179554	protein_coding	principal1	17	-1	6655900	771
ENSMUSG00000019368	protein_coding	Sec14l4	ENSMUST00000136222	processed_transcript		11	1	4031783	3238
ENSMUSG00000021816	protein_coding	Ppp3cb	ENSMUST00000160812	retained_intron		14	-1	20520721	321
ENSMUSG00000019368	protein_coding	Sec14l4	ENSMUST00000125351	processed_transcript		11	1	4031842	1073
ENSMUSG00000019368	protein_coding	Sec14l4	ENSMUST00000134482	processed_transcript		11	1	4041737	675
ENSMUSG00000001127	protein_coding	Araf	ENSMUST00000123219	retained_intron		X	1	20851130	879
ENSMUSG00000028785	protein_coding	Hpca	ENSMUST00000116442	protein_coding	principal1	4	-1	129120946	1568
ENSMUSG00000028082	protein_coding	Sh3d19	ENSMUST00000107664	protein_coding	principal2	3	1	86084434	6414
ENSMUSG00000021816	protein_coding	Ppp3cb	ENSMUST00000161332	retained_intron		14	-1	20524043	536
ENSMUSG00000023083	protein_coding	H2-M10.2	ENSMUST00000023845	protein_coding	principal1	17	-1	36286490	1113
ENSMUSG00000099828	unprocessed_pseudogene	Gm28796	ENSMUST00000186905	unprocessed_pseudogene		Y	1	28184470	696
ENSMUSG00000081516	processed_pseudogene	Gm12470	ENSMUST00000117239	processed_pseudogene		4	1	53662296	1049
ENSMUSG00000001127	protein_coding	Araf	ENSMUST00000128250	protein_coding		X	1	20857723	705
ENSMUSG00000028785	protein_coding	Hpca	ENSMUST00000139450	protein_coding	principal1	4	-1	129121889	812
ENSMUSG00000093593	protein_coding	Gm20683	ENSMUST00000176751	nonsense_mediated_decay	principal1	17	-1	25841763	2790
ENSMUSG00000004947	protein_coding	Dtx2	ENSMUST00000111145	protein_coding	alternative1	5	1	135994811	2493
ENSMUSG00000082393	processed_pseudogene	Gm15028	ENSMUST00000120295	processed_pseudogene		X	-1	20842474	370
ENSMUSG00000026456	protein_coding	Cyb5r1	ENSMUST00000154237	nonsense_mediated_decay		1	1	134405781	2420
ENSMUSG00000034164	protein_coding	Emid1	ENSMUST00000163299	protein_coding	alternative2	11	-1	5152240	1923
ENSMUSG00000028785	protein_coding	Hpca	ENSMUST00000125931	protein_coding		4	-1	129121925	759
ENSMUSG00000028785	protein_coding	Hpca	ENSMUST00000149763	protein_coding		4	-1	129121739	675
ENSMUSG00000004947	protein_coding	Dtx2	ENSMUST00000111144	protein_coding	alternative1	5	1	135994844	2545
ENSMUSG00000103973	TEC	BC055308	ENSMUST00000193380	TEC		1	1	95328681	2538
ENSMUSG00000004947	protein_coding	Dtx2	ENSMUST00000199239	protein_coding		5	1	135994847	649
ENSMUSG00000028785	protein_coding	Hpca	ENSMUST00000135763	protein_coding		4	-1	129121708	348
ENSMUSG00000043644	bidirectional_promoter_lncRNA	0610009L18Rik	ENSMUST00000143813	bidirectional_promoter_lncRNA		11	1	120348678	619
ENSMUSG00000100614	lincRNA	Gm28963	ENSMUST00000189567	lincRNA		Y	-1	57853710	1493
ENSMUSG00000028822	protein_coding	Tmem50a	ENSMUST00000030626	protein_coding	principal1	4	-1	134915024	1204
ENSMUSG00000028532	protein_coding	Cachd1	ENSMUST00000030257	protein_coding	principal2	4	1	100776675	5765
ENSMUSG00000100614	lincRNA	Gm28963	ENSMUST00000187027	lincRNA		Y	-1	57853257	431
ENSMUSG00000028785	protein_coding	Hpca	ENSMUST00000030572	protein_coding	principal1	4	-1	129121291	1525
ENSMUSG00000049013	protein_coding	Prss48	ENSMUST00000061343	protein_coding	principal1	3	-1	86002491	949
ENSMUSG00000028785	protein_coding	Hpca	ENSMUST00000164649	protein_coding	principal1	4	-1	129121740	1626
ENSMUSG00000028532	protein_coding	Cachd1	ENSMUST00000097955	protein_coding	alternative2	4	1	100776675	4277
ENSMUSG00000004947	protein_coding	Dtx2	ENSMUST00000125827	nonsense_mediated_decay		5	1	135994858	2661
ENSMUSG00000028822	protein_coding	Tmem50a	ENSMUST00000105863	protein_coding	principal1	4	-1	134915015	719
ENSMUSG00000051185	protein_coding	Fam174a	ENSMUST00000059975	protein_coding	principal1	1	1	95313623	2112
ENSMUSG00000028532	protein_coding	Cachd1	ENSMUST00000123475	processed_transcript		4	1	100994611	337
ENSMUSG00000028244	lincRNA	1700025O08Rik	ENSMUST00000123729	lincRNA		4	-1	22938435	456
ENSMUSG00000028532	protein_coding	Cachd1	ENSMUST00000136430	processed_transcript		4	1	100994710	497
ENSMUSG00000004947	protein_coding	Dtx2	ENSMUST00000005072	protein_coding	principal3	5	1	135994877	2562
ENSMUSG00000048197	protein_coding	Olfr1153	ENSMUST00000217436	protein_coding	principal1	2	1	87894962	2144
ENSMUSG00000051185	protein_coding	Fam174a	ENSMUST00000186780	protein_coding	principal1	1	1	95313628	3460
ENSMUSG00000092624	transcribed_unprocessed_pseudogene	Gm3654	ENSMUST00000173038	transcribed_unprocessed_pseudogene		7	-1	8288934	909
ENSMUSG00000048197	protein_coding	Olfr1153	ENSMUST00000052300	protein_coding		2	1	87896177	957
ENSMUSG00000026456	protein_coding	Cyb5r1	ENSMUST00000027726	protein_coding	principal1	1	1	134405781	1837
ENSMUSG00000004947	protein_coding	Dtx2	ENSMUST00000130345	protein_coding		5	1	135994882	431
ENSMUSG00000028441	protein_coding	1110017D15Rik	ENSMUST00000125303	protein_coding		4	-1	41511467	704
ENSMUSG00000092624	transcribed_unprocessed_pseudogene	Gm3654	ENSMUST00000210597	processed_transcript		7	-1	8289104	472
ENSMUSG00000004947	protein_coding	Dtx2	ENSMUST00000140146	processed_transcript		5	1	135995106	336
ENSMUSG00000108931	protein_coding	Olfr1284	ENSMUST00000062407	protein_coding	principal1	2	1	111375522	1774
ENSMUSG00000100501	lincRNA	Gm29466	ENSMUST00000191077	lincRNA		Y	-1	58048452	174
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000222287	retained_intron		12	1	40446039	3880
ENSMUSG00000026456	protein_coding	Cyb5r1	ENSMUST00000174315	processed_transcript		1	1	134405995	338
ENSMUSG00000004947	protein_coding	Dtx2	ENSMUST00000142041	retained_intron		5	1	136019558	5420
ENSMUSG00000075146	protein_coding	Olfr1154	ENSMUST00000215017	protein_coding	principal1	2	-1	87905166	2917
ENSMUSG00000108931	protein_coding	Olfr1284	ENSMUST00000209096	protein_coding	principal1	2	1	111378967	1064
ENSMUSG00000026456	protein_coding	Cyb5r1	ENSMUST00000130836	processed_transcript		1	1	134406003	434
ENSMUSG00000075146	protein_coding	Olfr1154	ENSMUST00000215862	protein_coding	principal1	2	-1	87905159	2624
ENSMUSG00000087098	lincRNA	Gm11884	ENSMUST00000131639	lincRNA		4	1	23260784	641
ENSMUSG00000022738	protein_coding	Gsc2	ENSMUST00000012279	protein_coding	alternative2	16	-1	17915059	1172
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000221758	retained_intron		12	1	40446053	3693
ENSMUSG00000101705	lincRNA	Gm28380	ENSMUST00000188800	lincRNA		1	1	91611406	385
ENSMUSG00000024448	protein_coding	H2-M10.1	ENSMUST00000025322	protein_coding	principal1	17	-1	36326155	1394
ENSMUSG00000052783	protein_coding	Grk4	ENSMUST00000001112	protein_coding	principal1	5	1	34660379	2408
ENSMUSG00000075146	protein_coding	Olfr1154	ENSMUST00000099844	protein_coding	principal1	2	-1	87903674	933
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000223290	retained_intron		12	1	40446083	2086
ENSMUSG00000026456	protein_coding	Cyb5r1	ENSMUST00000173908	protein_coding		1	1	134406004	563
ENSMUSG00000052783	protein_coding	Grk4	ENSMUST00000148588	protein_coding		5	1	34660975	305
ENSMUSG00000022738	protein_coding	Gsc2	ENSMUST00000232493	protein_coding	principal2	16	-1	17915059	725
ENSMUSG00000024448	protein_coding	H2-M10.1	ENSMUST00000172576	protein_coding		17	-1	36326145	912
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000222798	retained_intron		12	1	40446088	1276
ENSMUSG00000022159	protein_coding	Rab2b	ENSMUST00000022765	protein_coding	principal1	14	-1	52279545	2906
ENSMUSG00000026456	protein_coding	Cyb5r1	ENSMUST00000172496	retained_intron		1	1	134406020	957
ENSMUSG00000075145	protein_coding	Olfr1155	ENSMUST00000214641	protein_coding	principal1	2	-1	87944242	2048
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000220912	protein_coding	alternative2	12	1	40446336	7360
ENSMUSG00000075145	protein_coding	Olfr1155	ENSMUST00000215903	protein_coding	principal1	2	-1	87945137	2122
ENSMUSG00000100083	lincRNA	Gm29467	ENSMUST00000189669	lincRNA		Y	-1	58082675	935
ENSMUSG00000026456	protein_coding	Cyb5r1	ENSMUST00000133686	retained_intron		1	1	134406028	2341
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000221731	retained_intron		12	1	40776703	2054
ENSMUSG00000026456	protein_coding	Cyb5r1	ENSMUST00000127412	nonsense_mediated_decay		1	1	134406313	530
ENSMUSG00000100083	lincRNA	Gm29467	ENSMUST00000187577	lincRNA		Y	-1	58082699	352
ENSMUSG00000001131	protein_coding	Timp1	ENSMUST00000115342	protein_coding	principal1	X	1	20870166	883
ENSMUSG00000075145	protein_coding	Olfr1155	ENSMUST00000099843	protein_coding	principal1	2	-1	87943626	945
ENSMUSG00000083004	processed_pseudogene	Gm13413	ENSMUST00000120953	processed_pseudogene		2	1	32406055	602
ENSMUSG00000052783	protein_coding	Grk4	ENSMUST00000153323	processed_transcript		5	1	34710133	892
ENSMUSG00000083785	processed_pseudogene	Gm11888	ENSMUST00000120471	processed_pseudogene		4	1	23484820	810
ENSMUSG00000021679	protein_coding	S100z	ENSMUST00000022186	protein_coding	principal1	13	-1	95478721	399
ENSMUSG00000026456	protein_coding	Cyb5r1	ENSMUST00000172795	nonsense_mediated_decay		1	1	134406313	720
ENSMUSG00000112297	processed_pseudogene	Gm17816	ENSMUST00000219991	processed_pseudogene		12	1	4225785	2603
ENSMUSG00000022159	protein_coding	Rab2b	ENSMUST00000167116	protein_coding	principal1	14	-1	52279298	1573
ENSMUSG00000052783	protein_coding	Grk4	ENSMUST00000134217	processed_transcript		5	1	34744443	809
ENSMUSG00000075144	protein_coding	Olfr1156	ENSMUST00000216191	protein_coding	principal1	2	-1	87953100	3300
ENSMUSG00000007805	protein_coding	Twist2	ENSMUST00000007949	protein_coding	principal1	1	1	91801461	1329
ENSMUSG00000092452	unprocessed_pseudogene	Vmn2r-ps45	ENSMUST00000174138	unprocessed_pseudogene		7	-1	8325804	2435
ENSMUSG00000107246	antisense	Gm42560	ENSMUST00000201216	antisense		5	-1	34706831	1023
ENSMUSG00000112489	lincRNA	9230116L04Rik	ENSMUST00000220031	lincRNA		12	-1	79103939	1599
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000220783	retained_intron		12	1	40787592	2195
ENSMUSG00000075144	protein_coding	Olfr1156	ENSMUST00000216726	protein_coding	principal1	2	-1	87952994	3271
ENSMUSG00000075144	protein_coding	Olfr1156	ENSMUST00000099842	protein_coding	principal1	2	-1	87950265	1076
ENSMUSG00000101991	unprocessed_pseudogene	Gm21724	ENSMUST00000188264	unprocessed_pseudogene		Y	-1	58369530	696
ENSMUSG00000007805	protein_coding	Twist2	ENSMUST00000186075	protein_coding	principal1	1	1	91801470	2525
ENSMUSG00000112489	lincRNA	9230116L04Rik	ENSMUST00000217990	lincRNA		12	-1	79103935	734
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000221664	retained_intron		12	1	40788657	3209
ENSMUSG00000112489	lincRNA	9230116L04Rik	ENSMUST00000219976	lincRNA		12	-1	79103936	392
ENSMUSG00000082876	processed_pseudogene	Gm11889	ENSMUST00000118402	processed_pseudogene		4	-1	23518440	1079
ENSMUSG00000001131	protein_coding	Timp1	ENSMUST00000009530	protein_coding	principal1	X	1	20870221	833
ENSMUSG00000035954	protein_coding	Dock4	ENSMUST00000220850	retained_intron		12	1	40794234	2674
ENSMUSG00000100980	antisense	Gm29100	ENSMUST00000187564	antisense		1	-1	91802937	4410
ENSMUSG00000109638	TEC	Gm45630	ENSMUST00000210243	TEC		7	-1	142053075	1911
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000092849	protein_coding	principal3	11	1	82781108	4560
ENSMUSG00000100076	lincRNA	Gm20963	ENSMUST00000190880	lincRNA		Y	1	58404476	174
ENSMUSG00000101414	sense_intronic	Gm29101	ENSMUST00000188329	sense_intronic		1	1	91822515	1471
ENSMUSG00000118092	lincRNA	Gm50445	ENSMUST00000235597	lincRNA		19	1	23418343	1143
ENSMUSG00000082750	processed_pseudogene	Gm12156	ENSMUST00000119188	processed_pseudogene		11	1	44479207	554
ENSMUSG00000084179	processed_pseudogene	Gm11890	ENSMUST00000119585	processed_pseudogene		4	-1	23660344	417
ENSMUSG00000117850	processed_pseudogene	Gm50443	ENSMUST00000235152	processed_pseudogene		19	-1	23437727	472
ENSMUSG00000085545	lincRNA	Gm13553	ENSMUST00000133025	lincRNA		2	-1	26191678	1970
ENSMUSG00000022159	protein_coding	Rab2b	ENSMUST00000174585	retained_intron		14	-1	52269106	3576
ENSMUSG00000028710	protein_coding	Atpaf1	ENSMUST00000177280	protein_coding		4	1	115784812	805
ENSMUSG00000022159	protein_coding	Rab2b	ENSMUST00000100631	protein_coding		14	-1	52279339	2619
ENSMUSG00000020804	protein_coding	Aanat	ENSMUST00000142978	processed_transcript		11	1	116586432	766
ENSMUSG00000101100	lincRNA	Gm28326	ENSMUST00000187043	lincRNA		Y	1	58427109	622
ENSMUSG00000101100	lincRNA	Gm28326	ENSMUST00000187760	lincRNA		Y	1	58427109	437
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000172609	retained_intron		11	1	82781142	2901
ENSMUSG00000028441	protein_coding	1110017D15Rik	ENSMUST00000030152	protein_coding	principal1	4	-1	41517333	1114
ENSMUSG00000021120	protein_coding	Pigh	ENSMUST00000072154	protein_coding	principal1	12	-1	79089651	2339
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000080461	protein_coding		11	1	82781185	3056
ENSMUSG00000034235	protein_coding	Usp54	ENSMUST00000022356	protein_coding	principal1	14	-1	20641063	6580
ENSMUSG00000100395	lincRNA	Gm28448	ENSMUST00000188547	lincRNA		4	-1	23933954	428
ENSMUSG00000072722	protein_coding	Gm6588	ENSMUST00000100882	protein_coding	principal1	5	1	112449426	2313
ENSMUSG00000028441	protein_coding	1110017D15Rik	ENSMUST00000095126	protein_coding		4	-1	41517333	884
ENSMUSG00000034235	protein_coding	Usp54	ENSMUST00000123287	protein_coding		14	-1	20586060	666
ENSMUSG00000021120	protein_coding	Pigh	ENSMUST00000217998	protein_coding		12	-1	79089645	2868
ENSMUSG00000092447	unprocessed_pseudogene	Gm7696	ENSMUST00000174727	unprocessed_pseudogene		7	-1	8357905	907
ENSMUSG00000079547	protein_coding	H2-DMb1	ENSMUST00000114232	protein_coding	principal1	17	1	34153072	1404
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000173347	protein_coding	alternative2	11	1	82781193	3631
ENSMUSG00000021120	protein_coding	Pigh	ENSMUST00000217979	retained_intron		12	-1	79089649	595
ENSMUSG00000028441	protein_coding	1110017D15Rik	ENSMUST00000134546	processed_transcript		4	-1	41517328	777
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000134458	protein_coding		4	-1	123499917	14463
ENSMUSG00000083154	processed_pseudogene	Gm11892	ENSMUST00000117711	processed_pseudogene		4	1	24238100	1202
ENSMUSG00000079547	protein_coding	H2-DMb1	ENSMUST00000173262	retained_intron		17	1	34155237	522
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000173727	protein_coding	alternative2	11	1	82781193	3636
ENSMUSG00000028441	protein_coding	1110017D15Rik	ENSMUST00000138217	processed_transcript		4	-1	41508964	227
ENSMUSG00000079547	protein_coding	H2-DMb1	ENSMUST00000174765	processed_transcript		17	1	34156845	692
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000173009	protein_coding		11	1	82781198	1785
ENSMUSG00000022159	protein_coding	Rab2b	ENSMUST00000173046	processed_transcript		14	-1	52278674	576
ENSMUSG00000101744	lincRNA	Gm28325	ENSMUST00000185288	lincRNA		Y	1	58491793	437
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000131537	protein_coding		11	1	82781198	1782
ENSMUSG00000101744	lincRNA	Gm28325	ENSMUST00000191481	lincRNA		Y	1	58491793	622
ENSMUSG00000025147	protein_coding	Mob2	ENSMUST00000211000	protein_coding		7	-1	142061049	1646
ENSMUSG00000060685	protein_coding	Fthl17c	ENSMUST00000075792	protein_coding	principal1	X	-1	8976559	850
ENSMUSG00000022159	protein_coding	Rab2b	ENSMUST00000172488	nonsense_mediated_decay		14	-1	52279241	475
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000173722	protein_coding	principal3	11	1	82781203	5797
ENSMUSG00000022159	protein_coding	Rab2b	ENSMUST00000174020	nonsense_mediated_decay		14	-1	52279241	607
ENSMUSG00000025147	protein_coding	Mob2	ENSMUST00000211206	protein_coding		7	-1	142060853	2140
ENSMUSG00000022159	protein_coding	Rab2b	ENSMUST00000172634	nonsense_mediated_decay		14	-1	52275489	270
ENSMUSG00000048455	protein_coding	Sprr1b	ENSMUST00000062160	protein_coding	principal1	3	-1	92438789	830
ENSMUSG00000020804	protein_coding	Aanat	ENSMUST00000021160	nonsense_mediated_decay		11	1	116593687	1320
ENSMUSG00000105868	TEC	Gm43766	ENSMUST00000200590	TEC		14	1	52258811	5417
ENSMUSG00000094098	protein_coding	Vmn2r44	ENSMUST00000166499	protein_coding	principal1	7	-1	8383333	3977
ENSMUSG00000044499	protein_coding	Hs3st5	ENSMUST00000167191	protein_coding	principal1	10	1	36506814	2408
ENSMUSG00000094098	protein_coding	Vmn2r44	ENSMUST00000232847	retained_intron		7	-1	8383333	6120
ENSMUSG00000081148	processed_pseudogene	Gm11891	ENSMUST00000121241	processed_pseudogene		4	1	24423477	619
ENSMUSG00000020804	protein_coding	Aanat	ENSMUST00000153476	protein_coding	principal1	11	1	116593687	1353
ENSMUSG00000052688	protein_coding	Rab7b	ENSMUST00000064679	protein_coding	principal1	1	1	131688695	4498
ENSMUSG00000003575	protein_coding	Crtc1	ENSMUST00000076615	protein_coding	principal1	8	-1	70439579	5683
ENSMUSG00000021765	protein_coding	Fst	ENSMUST00000223640	protein_coding	alternative1	13	-1	114458951	2833
ENSMUSG00000020804	protein_coding	Aanat	ENSMUST00000123507	nonsense_mediated_decay		11	1	116595576	1219
ENSMUSG00000095807	unprocessed_pseudogene	Gm21405	ENSMUST00000179024	unprocessed_pseudogene		Y	1	58573017	930
ENSMUSG00000052688	protein_coding	Rab7b	ENSMUST00000064664	protein_coding		1	1	131688707	1672
ENSMUSG00000020804	protein_coding	Aanat	ENSMUST00000132601	processed_transcript		11	1	116595771	252
ENSMUSG00000034235	protein_coding	Usp54	ENSMUST00000143267	retained_intron		14	-1	20605330	3423
ENSMUSG00000021765	protein_coding	Fst	ENSMUST00000022287	protein_coding	alternative1	13	-1	114458949	1851
ENSMUSG00000099150	lincRNA	Gm27243	ENSMUST00000183964	lincRNA		4	-1	24430890	521
ENSMUSG00000091639	processed_pseudogene	Gm3756	ENSMUST00000169182	processed_pseudogene		9	-1	31936800	1355
ENSMUSG00000021765	protein_coding	Fst	ENSMUST00000223865	retained_intron		13	-1	114454551	673
ENSMUSG00000045539	protein_coding	Sprr3	ENSMUST00000058142	protein_coding	principal1	3	-1	92458720	1222
ENSMUSG00000021765	protein_coding	Fst	ENSMUST00000231498	retained_intron		13	-1	114456236	2921
ENSMUSG00000111771	lincRNA	Gm47465	ENSMUST00000216368	lincRNA		9	-1	32005460	734
ENSMUSG00000111166	processed_pseudogene	Tpi-rs4	ENSMUST00000213734	processed_pseudogene		9	1	31948346	720
ENSMUSG00000092441	unprocessed_pseudogene	Vmn2r-ps46	ENSMUST00000172969	unprocessed_pseudogene		7	-1	8422775	2556
ENSMUSG00000087584	processed_pseudogene	Gm14457	ENSMUST00000148069	processed_pseudogene		X	1	8981822	1161
ENSMUSG00000034235	protein_coding	Usp54	ENSMUST00000127342	retained_intron		14	-1	20618354	1980
ENSMUSG00000034235	protein_coding	Usp54	ENSMUST00000035340	protein_coding	principal1	14	-1	20618354	6495
ENSMUSG00000110845	processed_pseudogene	Gm47481	ENSMUST00000216731	processed_pseudogene		9	-1	32044858	474
ENSMUSG00000102345	processed_pseudogene	Gm37377	ENSMUST00000191733	processed_pseudogene		3	-1	92473543	304
ENSMUSG00000110840	processed_pseudogene	Gm47496	ENSMUST00000214707	processed_pseudogene		9	1	32078281	485
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000155818	retained_intron		11	1	82795685	720
ENSMUSG00000101317	lincRNA	Gm28284	ENSMUST00000190221	lincRNA		Y	-1	58691821	1498
ENSMUSG00000116818	processed_pseudogene	Gm7513	ENSMUST00000232676	processed_pseudogene		17	1	17648821	1063
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000154887	retained_intron		11	1	82797218	599
ENSMUSG00000044499	protein_coding	Hs3st5	ENSMUST00000058738	protein_coding	principal1	10	1	36506819	3078
ENSMUSG00000116892	processed_pseudogene	Gm49787	ENSMUST00000231401	processed_pseudogene		17	-1	17658887	1981
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000172837	protein_coding		11	1	82798349	793
ENSMUSG00000028710	protein_coding	Atpaf1	ENSMUST00000176047	protein_coding	principal1	4	1	115784814	2330
ENSMUSG00000003575	protein_coding	Crtc1	ENSMUST00000142769	retained_intron		8	-1	70439579	10265
ENSMUSG00000101317	lincRNA	Gm28284	ENSMUST00000186673	lincRNA		Y	-1	58691369	437
ENSMUSG00000044499	protein_coding	Hs3st5	ENSMUST00000172357	retained_intron		10	1	36506889	1913
ENSMUSG00000003575	protein_coding	Crtc1	ENSMUST00000125273	retained_intron		8	-1	70402798	695
ENSMUSG00000021765	protein_coding	Fst	ENSMUST00000231252	protein_coding	principal2	13	-1	114458586	1113
ENSMUSG00000020652	protein_coding	Cenpo	ENSMUST00000140975	protein_coding	principal2	12	-1	4234294	4348
ENSMUSG00000003575	protein_coding	Crtc1	ENSMUST00000125613	retained_intron		8	-1	70439575	870
ENSMUSG00000028710	protein_coding	Atpaf1	ENSMUST00000239030	protein_coding		4	1	115784984	2160
ENSMUSG00000003575	protein_coding	Crtc1	ENSMUST00000153632	processed_transcript		8	-1	70431285	332
ENSMUSG00000044499	protein_coding	Hs3st5	ENSMUST00000168572	protein_coding	principal1	10	1	36507026	2715
ENSMUSG00000033207	protein_coding	Mamdc2	ENSMUST00000036069	protein_coding	principal1	19	-1	23448398	3414
ENSMUSG00000028710	protein_coding	Atpaf1	ENSMUST00000184179	nonsense_mediated_decay		4	1	115785212	2655
ENSMUSG00000044499	protein_coding	Hs3st5	ENSMUST00000171521	processed_transcript		10	1	36507407	709
ENSMUSG00000021765	protein_coding	Fst	ENSMUST00000225068	protein_coding		13	-1	114455210	892
ENSMUSG00000101244	lincRNA	Gm29368	ENSMUST00000187201	lincRNA		Y	-1	58720772	1489
ENSMUSG00000110574	processed_pseudogene	Gm21112	ENSMUST00000212224	processed_pseudogene		8	-1	20597041	578
ENSMUSG00000028710	protein_coding	Atpaf1	ENSMUST00000175725	protein_coding		4	1	115787743	996
ENSMUSG00000101244	lincRNA	Gm29368	ENSMUST00000190344	lincRNA		Y	-1	58720319	431
ENSMUSG00000024695	protein_coding	Zfp91	ENSMUST00000038627	protein_coding	principal1	19	-1	12796126	5531
ENSMUSG00000028710	protein_coding	Atpaf1	ENSMUST00000176192	protein_coding		4	1	115795404	969
ENSMUSG00000052688	protein_coding	Rab7b	ENSMUST00000136247	protein_coding		1	1	131688738	497
ENSMUSG00000028999	protein_coding	Rint1	ENSMUST00000030852	protein_coding	principal3	5	1	23787711	3298
ENSMUSG00000076471	TR_V_gene	Trbv14	ENSMUST00000103272	TR_V_gene	principal1	6	1	41135145	368
ENSMUSG00000033207	protein_coding	Mamdc2	ENSMUST00000236349	nonsense_mediated_decay		19	-1	23448442	3065
ENSMUSG00000052688	protein_coding	Rab7b	ENSMUST00000129905	protein_coding		1	1	131688766	476
ENSMUSG00000114935	antisense	Gm47040	ENSMUST00000225706	antisense		13	1	114458663	605
ENSMUSG00000048920	protein_coding	Fkrp	ENSMUST00000061390	protein_coding	principal1	7	-1	16816732	2827
ENSMUSG00000020652	protein_coding	Cenpo	ENSMUST00000020981	protein_coding	alternative2	12	-1	4233965	2037
ENSMUSG00000114330	lincRNA	Gm47349	ENSMUST00000225123	lincRNA		13	1	39467347	177
ENSMUSG00000024695	protein_coding	Zfp91	ENSMUST00000137256	retained_intron		19	-1	12790309	4426
ENSMUSG00000020652	protein_coding	Cenpo	ENSMUST00000111169	protein_coding	alternative2	12	-1	4233965	1550
ENSMUSG00000114221	lincRNA	Gm47351	ENSMUST00000224895	lincRNA		13	-1	39533103	526
ENSMUSG00000028710	protein_coding	Atpaf1	ENSMUST00000137401	nonsense_mediated_decay		4	1	115800384	896
ENSMUSG00000020697	protein_coding	Lig3	ENSMUST00000021039	protein_coding	alternative2	11	1	82781135	5957
ENSMUSG00000028999	protein_coding	Rint1	ENSMUST00000117783	protein_coding		5	1	23787712	560
ENSMUSG00000052688	protein_coding	Rab7b	ENSMUST00000130848	processed_transcript		1	1	131696638	607
ENSMUSG00000048920	protein_coding	Fkrp	ENSMUST00000206259	protein_coding		7	-1	16815521	721
ENSMUSG00000092120	protein_coding	Vmn2r90	ENSMUST00000169805	protein_coding	principal1	17	1	17703747	3775
ENSMUSG00000020652	protein_coding	Cenpo	ENSMUST00000146261	protein_coding		12	-1	4216546	1210
ENSMUSG00000028999	protein_coding	Rint1	ENSMUST00000115113	protein_coding	alternative2	5	1	23787715	3048
ENSMUSG00000114300	lincRNA	Gm32243	ENSMUST00000224216	lincRNA		13	-1	39647247	661
ENSMUSG00000048920	protein_coding	Fkrp	ENSMUST00000205677	retained_intron		7	-1	16815693	2573
ENSMUSG00000114841	lincRNA	Gm47352	ENSMUST00000225217	lincRNA		13	1	39571583	437
ENSMUSG00000025147	protein_coding	Mob2	ENSMUST00000084418	protein_coding	principal1	7	-1	142061065	1490
ENSMUSG00000114841	lincRNA	Gm47352	ENSMUST00000224834	lincRNA		13	1	39664833	1545
ENSMUSG00000048920	protein_coding	Fkrp	ENSMUST00000205368	retained_intron		7	-1	16816732	416
ENSMUSG00000090662	protein_coding	Vmn2r45	ENSMUST00000164845	protein_coding	principal1	7	-1	8489075	4581
ENSMUSG00000075143	protein_coding	Olfr1157	ENSMUST00000099841	protein_coding	principal1	2	-1	87968299	4621
ENSMUSG00000020652	protein_coding	Cenpo	ENSMUST00000126017	retained_intron		12	-1	4233938	1683
ENSMUSG00000020652	protein_coding	Cenpo	ENSMUST00000146523	retained_intron		12	-1	4216506	2397
ENSMUSG00000118491	protein_coding	Zfp91	ENSMUST00000142247	nonsense_mediated_decay	principal1	19	-1	12796126	3221
ENSMUSG00000092120	protein_coding	Vmn2r90	ENSMUST00000232078	nonsense_mediated_decay		17	1	17703747	3545
ENSMUSG00000092120	protein_coding	Vmn2r90	ENSMUST00000231659	nonsense_mediated_decay		17	1	17703747	2676
ENSMUSG00000112368	unprocessed_pseudogene	Gm49376	ENSMUST00000217756	unprocessed_pseudogene		12	1	55275381	367
ENSMUSG00000092120	protein_coding	Vmn2r90	ENSMUST00000232113	nonsense_mediated_decay		17	1	17703747	2711
ENSMUSG00000025147	protein_coding	Mob2	ENSMUST00000210684	nonsense_mediated_decay		7	-1	142061065	958
ENSMUSG00000020652	protein_coding	Cenpo	ENSMUST00000128466	protein_coding		12	-1	4232003	672
ENSMUSG00000083335	processed_pseudogene	Gm13397	ENSMUST00000119562	processed_pseudogene		2	1	27034680	878
ENSMUSG00000114346	processed_pseudogene	Gm5195	ENSMUST00000224327	processed_pseudogene		13	1	39757308	660
ENSMUSG00000025147	protein_coding	Mob2	ENSMUST00000209732	protein_coding		7	-1	142026075	977
ENSMUSG00000079415	protein_coding	Cntf	ENSMUST00000112933	protein_coding	principal1	19	-1	12765632	1073
ENSMUSG00000025147	protein_coding	Mob2	ENSMUST00000209725	protein_coding		7	-1	142061064	478
ENSMUSG00000044813	protein_coding	Shb	ENSMUST00000147926	processed_transcript		4	-1	45482802	1609
ENSMUSG00000025147	protein_coding	Mob2	ENSMUST00000211633	retained_intron		7	-1	142025951	3797
ENSMUSG00000054752	protein_coding	Fsd1l	ENSMUST00000132151	protein_coding	principal2	4	1	53631471	7467
ENSMUSG00000087364	protein_coding	Gm13398	ENSMUST00000149378	protein_coding	principal1	2	1	27037285	2837
ENSMUSG00000025147	protein_coding	Mob2	ENSMUST00000211505	processed_transcript		7	-1	142061045	453
ENSMUSG00000016831	protein_coding	Tox4	ENSMUST00000022766	protein_coding	principal1	14	1	52279146	5350
ENSMUSG00000028999	protein_coding	Rint1	ENSMUST00000124680	retained_intron		5	1	23787719	3363
ENSMUSG00000028999	protein_coding	Rint1	ENSMUST00000196607	retained_intron		5	1	23787721	2308
ENSMUSG00000112622	TEC	Gm47164	ENSMUST00000220380	TEC		10	-1	103213437	5690
ENSMUSG00000028999	protein_coding	Rint1	ENSMUST00000112256	processed_transcript		5	1	23787741	1761
ENSMUSG00000003559	protein_coding	As3mt	ENSMUST00000003655	protein_coding	principal1	19	1	46707458	1736
ENSMUSG00000028999	protein_coding	Rint1	ENSMUST00000132260	retained_intron		5	1	23806838	671
ENSMUSG00000058351	protein_coding	Smim4	ENSMUST00000203261	protein_coding		14	-1	31128956	1219
ENSMUSG00000028999	protein_coding	Rint1	ENSMUST00000144709	processed_transcript		5	1	23811766	151
ENSMUSG00000020654	protein_coding	Adcy3	ENSMUST00000152792	retained_intron		12	1	4133103	5621
ENSMUSG00000019892	protein_coding	Lrriq1	ENSMUST00000218841	protein_coding		10	-1	103071200	476
ENSMUSG00000058351	protein_coding	Smim4	ENSMUST00000064032	protein_coding		14	-1	31128913	791
ENSMUSG00000030098	protein_coding	Grip2	ENSMUST00000162300	protein_coding	principal2	6	-1	91807456	5206
ENSMUSG00000086697	antisense	4933427G23Rik	ENSMUST00000122963	antisense		5	-1	23831897	2515
ENSMUSG00000016831	protein_coding	Tox4	ENSMUST00000152493	retained_intron		14	1	52279565	2997
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000176758	processed_transcript		12	-1	87429437	3598
ENSMUSG00000054752	protein_coding	Fsd1l	ENSMUST00000107643	retained_intron		4	1	53631490	2350
ENSMUSG00000101347	unprocessed_pseudogene	Gm28219	ENSMUST00000185452	unprocessed_pseudogene		Y	-1	86148807	696
ENSMUSG00000016831	protein_coding	Tox4	ENSMUST00000172655	retained_intron		14	1	52279617	344
ENSMUSG00000054752	protein_coding	Fsd1l	ENSMUST00000162270	retained_intron		4	1	53631491	448
ENSMUSG00000058351	protein_coding	Smim4	ENSMUST00000049732	protein_coding	principal1	14	-1	31128838	311
ENSMUSG00000099824	lincRNA	Gm28218	ENSMUST00000186782	lincRNA		Y	1	86219344	1498
ENSMUSG00000016831	protein_coding	Tox4	ENSMUST00000137753	retained_intron		14	1	52279732	709
ENSMUSG00000016831	protein_coding	Tox4	ENSMUST00000173361	processed_transcript		14	1	52285734	675
ENSMUSG00000099824	lincRNA	Gm28218	ENSMUST00000185320	lincRNA		Y	1	86219796	433
ENSMUSG00000037266	protein_coding	Rsrp1	ENSMUST00000148900	retained_intron		4	1	134923592	3051
ENSMUSG00000058351	protein_coding	Smim4	ENSMUST00000090205	protein_coding		14	-1	31128903	426
ENSMUSG00000115412	processed_pseudogene	Gm49094	ENSMUST00000226537	processed_pseudogene		14	-1	31043120	499
ENSMUSG00000003559	protein_coding	As3mt	ENSMUST00000236063	nonsense_mediated_decay		19	1	46707675	1659
ENSMUSG00000003559	protein_coding	As3mt	ENSMUST00000236473	processed_transcript		19	1	46707677	1529
ENSMUSG00000054752	protein_coding	Fsd1l	ENSMUST00000159415	protein_coding		4	1	53631569	1543
ENSMUSG00000003559	protein_coding	As3mt	ENSMUST00000235842	processed_transcript		19	1	46707774	642
ENSMUSG00000003559	protein_coding	As3mt	ENSMUST00000236465	nonsense_mediated_decay		19	1	46707918	1620
ENSMUSG00000054752	protein_coding	Fsd1l	ENSMUST00000163067	protein_coding		4	1	53631574	1503
ENSMUSG00000003559	protein_coding	As3mt	ENSMUST00000237219	protein_coding		19	1	46707968	1719
ENSMUSG00000003559	protein_coding	As3mt	ENSMUST00000235266	processed_transcript		19	1	46711972	641
ENSMUSG00000022667	protein_coding	Cd200r1	ENSMUST00000057488	protein_coding	principal1	16	1	44765736	1892
ENSMUSG00000030098	protein_coding	Grip2	ENSMUST00000162293	nonsense_mediated_decay		6	-1	91827250	5520
ENSMUSG00000030098	protein_coding	Grip2	ENSMUST00000159684	protein_coding	alternative2	6	-1	91807318	3006
ENSMUSG00000054752	protein_coding	Fsd1l	ENSMUST00000129648	nonsense_mediated_decay		4	1	53631716	704
ENSMUSG00000054752	protein_coding	Fsd1l	ENSMUST00000180164	protein_coding	alternative1	4	1	53643280	7340
ENSMUSG00000005952	protein_coding	Trpv1	ENSMUST00000102526	protein_coding	principal2	11	1	73234292	3361
ENSMUSG00000114237	lincRNA	Gm48694	ENSMUST00000223701	lincRNA		13	-1	35256521	189
ENSMUSG00000114838	lincRNA	Gm48703	ENSMUST00000226101	lincRNA		13	1	35395383	1304
ENSMUSG00000030098	protein_coding	Grip2	ENSMUST00000161566	nonsense_mediated_decay		6	-1	91807393	1008
ENSMUSG00000005952	protein_coding	Trpv1	ENSMUST00000006106	protein_coding	alternative2	11	1	73238259	2340
ENSMUSG00000005952	protein_coding	Trpv1	ENSMUST00000108470	protein_coding		11	1	73240046	2667
ENSMUSG00000114337	lincRNA	Gm48704	ENSMUST00000225154	lincRNA		13	1	35543902	1171
ENSMUSG00000005952	protein_coding	Trpv1	ENSMUST00000138853	protein_coding		11	1	73240310	1675
ENSMUSG00000030098	protein_coding	Grip2	ENSMUST00000161545	nonsense_mediated_decay		6	-1	91796244	763
ENSMUSG00000022667	protein_coding	Cd200r1	ENSMUST00000231633	nonsense_mediated_decay		16	1	44765799	2768
ENSMUSG00000044813	protein_coding	Shb	ENSMUST00000061986	protein_coding	principal1	4	-1	45530330	2244
ENSMUSG00000005952	protein_coding	Trpv1	ENSMUST00000128113	processed_transcript		11	1	73252371	533
ENSMUSG00000030098	protein_coding	Grip2	ENSMUST00000205964	retained_intron		6	-1	91796260	3555
ENSMUSG00000030816	protein_coding	Rnf40	ENSMUST00000205694	protein_coding	principal1	7	1	127588767	5279
ENSMUSG00000111881	unprocessed_pseudogene	Vmn2r-ps92	ENSMUST00000220242	unprocessed_pseudogene		10	1	78554015	388
ENSMUSG00000022667	protein_coding	Cd200r1	ENSMUST00000134625	nonsense_mediated_decay		16	1	44765826	1310
ENSMUSG00000114163	lincRNA	Gm32296	ENSMUST00000220590	lincRNA		12	1	85529598	1057
ENSMUSG00000026037	protein_coding	Orc2	ENSMUST00000027198	protein_coding	principal4	1	-1	58505109	3561
ENSMUSG00000044813	protein_coding	Shb	ENSMUST00000130107	processed_transcript		4	-1	45492841	726
ENSMUSG00000044813	protein_coding	Shb	ENSMUST00000125599	retained_intron		4	-1	45489403	737
ENSMUSG00000030816	protein_coding	Rnf40	ENSMUST00000033088	protein_coding		7	1	127588919	3906
ENSMUSG00000030816	protein_coding	Rnf40	ENSMUST00000206914	protein_coding		7	1	127588919	3735
ENSMUSG00000044813	protein_coding	Shb	ENSMUST00000146236	protein_coding		4	-1	45489794	459
ENSMUSG00000026037	protein_coding	Orc2	ENSMUST00000114325	protein_coding	alternative2	1	-1	58501416	1587
ENSMUSG00000030816	protein_coding	Rnf40	ENSMUST00000206699	retained_intron		7	1	127592415	592
ENSMUSG00000037266	protein_coding	Rsrp1	ENSMUST00000078084	protein_coding	principal1	4	1	134923592	1749
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000162961	protein_coding	principal1	12	-1	87443839	3857
ENSMUSG00000044813	protein_coding	Shb	ENSMUST00000147448	protein_coding		4	-1	45532470	368
ENSMUSG00000030816	protein_coding	Rnf40	ENSMUST00000206724	retained_intron		7	1	127592876	622
ENSMUSG00000026037	protein_coding	Orc2	ENSMUST00000151723	retained_intron		1	-1	58481449	529
ENSMUSG00000109587	antisense	Gm31105	ENSMUST00000211421	antisense		8	1	80879940	687
ENSMUSG00000076472	TR_V_gene	Trbv15	ENSMUST00000103273	TR_V_gene	principal1	6	1	41141188	370
ENSMUSG00000030816	protein_coding	Rnf40	ENSMUST00000206443	retained_intron		7	1	127596811	777
ENSMUSG00000068479	protein_coding	Mfap1a	ENSMUST00000089926	protein_coding	principal1	2	-1	121506665	4198
ENSMUSG00000037266	protein_coding	Rsrp1	ENSMUST00000125679	processed_transcript		4	1	134923593	571
ENSMUSG00000026037	protein_coding	Orc2	ENSMUST00000190695	protein_coding		1	-1	58504925	372
ENSMUSG00000060716	protein_coding	Plekhh1	ENSMUST00000039928	protein_coding	principal1	12	1	79029163	6439
ENSMUSG00000037266	protein_coding	Rsrp1	ENSMUST00000151178	processed_transcript		4	1	134923626	618
ENSMUSG00000026037	protein_coding	Orc2	ENSMUST00000191206	protein_coding		1	-1	58504955	370
ENSMUSG00000023947	protein_coding	Nfkbie	ENSMUST00000024742	protein_coding	principal2	17	1	45555703	2435
ENSMUSG00000040181	protein_coding	Fmo1	ENSMUST00000046049	protein_coding	principal1	1	-1	162866610	2388
ENSMUSG00000093400	antisense	Gm20647	ENSMUST00000176396	antisense		5	1	72316354	857
ENSMUSG00000053268	protein_coding	Dspp	ENSMUST00000112771	protein_coding	principal1	5	1	104170712	4431
ENSMUSG00000060716	protein_coding	Plekhh1	ENSMUST00000217954	protein_coding		12	1	79029694	430
ENSMUSG00000099579	antisense	1700120K04Rik	ENSMUST00000191038	antisense		7	-1	127604445	546
ENSMUSG00000076473	TR_V_gene	Trbv16	ENSMUST00000103274	TR_V_gene	principal1	6	1	41151740	398
ENSMUSG00000023947	protein_coding	Nfkbie	ENSMUST00000233929	protein_coding	alternative2	17	1	45555711	2356
ENSMUSG00000060716	protein_coding	Plekhh1	ENSMUST00000219956	protein_coding	principal1	12	1	79035636	5229
ENSMUSG00000108677	antisense	Gm44759	ENSMUST00000206057	antisense		7	-1	127595900	430
ENSMUSG00000040181	protein_coding	Fmo1	ENSMUST00000136120	processed_transcript		1	-1	162830473	584
ENSMUSG00000102471	processed_pseudogene	Gm5100	ENSMUST00000195631	processed_pseudogene		1	-1	39598005	589
ENSMUSG00000109521	transcribed_unprocessed_pseudogene	Olfr1285	ENSMUST00000220153	processed_transcript		2	1	111406534	1430
ENSMUSG00000076474	TR_V_gene	Trbv17	ENSMUST00000103275	TR_V_gene	principal1	6	1	41163062	374
ENSMUSG00000074479	processed_pseudogene	Rtraf-ps	ENSMUST00000098952	processed_pseudogene		3	-1	88577139	730
ENSMUSG00000109521	transcribed_unprocessed_pseudogene	Olfr1285	ENSMUST00000208523	transcribed_unprocessed_pseudogene		2	1	111408396	903
ENSMUSG00000023947	protein_coding	Nfkbie	ENSMUST00000233379	retained_intron		17	1	45555739	3006
ENSMUSG00000040181	protein_coding	Fmo1	ENSMUST00000143902	processed_transcript		1	-1	162834672	1481
ENSMUSG00000037266	protein_coding	Rsrp1	ENSMUST00000145364	processed_transcript		4	1	134923645	2151
ENSMUSG00000040181	protein_coding	Fmo1	ENSMUST00000193766	retained_intron		1	-1	162834672	3106
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000121584	protein_coding	alternative2	16	-1	97851850	6194
ENSMUSG00000037266	protein_coding	Rsrp1	ENSMUST00000154837	processed_transcript		4	1	134924460	734
ENSMUSG00000040181	protein_coding	Fmo1	ENSMUST00000134098	protein_coding		1	-1	162859962	1077
ENSMUSG00000037266	protein_coding	Rsrp1	ENSMUST00000149354	processed_transcript		4	1	134924710	361
ENSMUSG00000096703	protein_coding	Olfr1286	ENSMUST00000184954	protein_coding	principal1	2	-1	111423115	3398
ENSMUSG00000060716	protein_coding	Plekhh1	ENSMUST00000219946	processed_transcript		12	1	79067609	4106
ENSMUSG00000040181	protein_coding	Fmo1	ENSMUST00000193078	protein_coding		1	-1	162859820	750
ENSMUSG00000037266	protein_coding	Rsrp1	ENSMUST00000149003	processed_transcript		4	1	134925446	812
ENSMUSG00000060967	protein_coding	Etd	ENSMUST00000074232	protein_coding	principal1	X	1	53434918	478
ENSMUSG00000092301	processed_pseudogene	Gm6887	ENSMUST00000080945	processed_pseudogene		7	-1	42465369	482
ENSMUSG00000096703	protein_coding	Olfr1286	ENSMUST00000213210	protein_coding	principal1	2	-1	111423112	3740
ENSMUSG00000040181	protein_coding	Fmo1	ENSMUST00000131058	protein_coding		1	-1	162859714	821
ENSMUSG00000096703	protein_coding	Olfr1286	ENSMUST00000099617	protein_coding	principal1	2	-1	111420949	918
ENSMUSG00000075142	protein_coding	Olfr74	ENSMUST00000099840	protein_coding	principal1	2	-1	87974663	957
ENSMUSG00000081051	processed_pseudogene	Gm15427	ENSMUST00000117288	processed_pseudogene		1	1	95498621	531
ENSMUSG00000028378	protein_coding	Ptgr1	ENSMUST00000030069	protein_coding	principal1	4	-1	58987119	2296
ENSMUSG00000040181	protein_coding	Fmo1	ENSMUST00000111518	protein_coding		1	-1	162859969	1506
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000160113	nonsense_mediated_decay		12	-1	87443826	2019
ENSMUSG00000062793	protein_coding	Olfr1158	ENSMUST00000102622	protein_coding	principal1	2	1	87990113	942
ENSMUSG00000095586	protein_coding	Olfr1287	ENSMUST00000075390	protein_coding	principal1	2	1	111449142	918
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000106911	protein_coding	alternative1	4	1	102087543	3020
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000162247	nonsense_mediated_decay		12	-1	87443828	1883
ENSMUSG00000095294	protein_coding	Gm21119	ENSMUST00000178438	protein_coding	principal1	8	1	20614919	2522
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000113974	protein_coding		19	1	3767421	4150
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000172845	retained_intron		4	1	102087725	476
ENSMUSG00000111189	antisense	Gm48293	ENSMUST00000213907	antisense		9	-1	40762673	457
ENSMUSG00000041355	protein_coding	Ssr2	ENSMUST00000192688	protein_coding		3	1	88575876	560
ENSMUSG00000102409	TR_V_pseudogene	Trbv18	ENSMUST00000194256	TR_V_pseudogene		6	1	41175315	294
ENSMUSG00000114710	lincRNA	Gm40923	ENSMUST00000224577	lincRNA		13	-1	39791384	454
ENSMUSG00000111189	antisense	Gm48293	ENSMUST00000216792	antisense		9	-1	40762255	432
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000161712	nonsense_mediated_decay		12	-1	87443836	2154
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000173119	nonsense_mediated_decay		4	1	102087741	2347
ENSMUSG00000114710	lincRNA	Gm40923	ENSMUST00000225267	lincRNA		13	-1	39791323	469
ENSMUSG00000041355	protein_coding	Ssr2	ENSMUST00000193069	protein_coding		3	1	88575939	495
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000159079	nonsense_mediated_decay		12	-1	87443828	1042
ENSMUSG00000111794	sense_intronic	Gm48294	ENSMUST00000215601	sense_intronic		9	1	40715158	358
ENSMUSG00000103197	TEC	Gm37642	ENSMUST00000193166	TEC		1	-1	95648508	1735
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000106907	protein_coding		4	1	102254742	1374
ENSMUSG00000041355	protein_coding	Ssr2	ENSMUST00000194604	protein_coding		3	1	88575949	494
ENSMUSG00000076475	TR_V_gene	Trbv19	ENSMUST00000103276	TR_V_gene	principal1	6	1	41178375	566
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000160687	protein_coding		12	-1	87438559	541
ENSMUSG00000032024	protein_coding	Clmp	ENSMUST00000139577	processed_transcript		9	1	40685962	634
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000160919	processed_transcript		12	-1	87441726	611
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000162986	nonsense_mediated_decay		12	-1	87443833	1319
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000142295	nonsense_mediated_decay		16	-1	97851783	5623
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000106908	protein_coding	principal2	4	1	102255003	4304
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000160850	retained_intron		12	-1	87443839	1423
ENSMUSG00000117944	processed_pseudogene	Gm50422	ENSMUST00000237913	processed_pseudogene		19	1	23605898	382
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000131951	retained_intron		16	-1	97800302	3541
ENSMUSG00000025380	protein_coding	Fscn2	ENSMUST00000026445	protein_coding	principal1	11	1	120361534	1713
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000136529	processed_transcript		16	-1	97803445	720
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000091090	retained_intron		12	-1	87444017	1335
ENSMUSG00000041681	protein_coding	Iapp	ENSMUST00000041993	protein_coding	principal1	6	1	142298423	839
ENSMUSG00000038402	protein_coding	Foxf2	ENSMUST00000042054	protein_coding	principal1	13	1	31625816	2363
ENSMUSG00000079036	protein_coding	Alkbh1	ENSMUST00000185301	protein_coding		12	-1	87443918	408
ENSMUSG00000100306	lincRNA	Gm29362	ENSMUST00000187898	lincRNA		12	-1	87437816	133
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000126916	retained_intron		16	-1	97797919	360
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000231599	retained_intron		16	-1	97799589	1095
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000174186	nonsense_mediated_decay		4	1	102255230	848
ENSMUSG00000025380	protein_coding	Fscn2	ENSMUST00000152556	processed_transcript		11	1	120366542	591
ENSMUSG00000041681	protein_coding	Iapp	ENSMUST00000141583	processed_transcript		6	1	142298447	294
ENSMUSG00000031714	protein_coding	Gab1	ENSMUST00000210676	protein_coding	alternative1	8	-1	80880519	4985
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000106904	protein_coding		4	1	102421518	2430
ENSMUSG00000076476	TR_V_gene	Trbv20	ENSMUST00000103277	TR_V_gene	principal1	6	1	41188273	335
ENSMUSG00000025380	protein_coding	Fscn2	ENSMUST00000130476	processed_transcript		11	1	120366713	669
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000128917	retained_intron		16	-1	97829728	3335
ENSMUSG00000083450	processed_pseudogene	Gm14619	ENSMUST00000120480	processed_pseudogene		X	1	42347512	168
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000172616	protein_coding		4	1	102430047	823
ENSMUSG00000081559	processed_pseudogene	Gm12411	ENSMUST00000119140	processed_pseudogene		4	1	45550017	483
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000133632	retained_intron		4	1	102470397	903
ENSMUSG00000044701	protein_coding	Il27	ENSMUST00000058429	protein_coding	principal1	7	-1	126594941	1021
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000129331	retained_intron		16	-1	97839967	758
ENSMUSG00000033053	protein_coding	1700028P14Rik	ENSMUST00000035849	protein_coding	principal1	19	-1	23652812	875
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000119200	protein_coding		16	-1	97848884	421
ENSMUSG00000044424	processed_pseudogene	Gm9493	ENSMUST00000104916	processed_pseudogene		19	1	23619749	571
ENSMUSG00000041355	protein_coding	Ssr2	ENSMUST00000195014	protein_coding	principal1	3	1	88579608	1059
ENSMUSG00000031714	protein_coding	Gab1	ENSMUST00000034150	protein_coding	principal3	8	-1	80880496	4870
ENSMUSG00000032024	protein_coding	Clmp	ENSMUST00000034522	protein_coding	principal1	9	1	40686012	4154
ENSMUSG00000090291	protein_coding	Lrrc10b	ENSMUST00000171400	protein_coding	principal1	19	-1	10457473	2103
ENSMUSG00000114381	processed_pseudogene	Gm47361	ENSMUST00000224302	processed_pseudogene		13	1	39796321	624
ENSMUSG00000114491	processed_transcript	A230103O09Rik	ENSMUST00000224322	lincRNA		13	1	39791438	568
ENSMUSG00000114491	processed_transcript	A230103O09Rik	ENSMUST00000224219	lincRNA		13	1	39791449	531
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000097950	protein_coding		4	1	102570095	2756
ENSMUSG00000114491	processed_transcript	A230103O09Rik	ENSMUST00000224832	lincRNA		13	1	39791552	565
ENSMUSG00000114491	processed_transcript	A230103O09Rik	ENSMUST00000224260	lincRNA		13	1	39816898	767
ENSMUSG00000114491	processed_transcript	A230103O09Rik	ENSMUST00000223664	processed_transcript		13	1	39816898	625
ENSMUSG00000032024	protein_coding	Clmp	ENSMUST00000141759	retained_intron		9	1	40686035	608
ENSMUSG00000031714	protein_coding	Gab1	ENSMUST00000211018	processed_transcript		8	-1	80830884	445
ENSMUSG00000114491	processed_transcript	A230103O09Rik	ENSMUST00000226088	lincRNA		13	1	39824354	545
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000135505	protein_coding		16	-1	97851227	364
ENSMUSG00000041355	protein_coding	Ssr2	ENSMUST00000193934	protein_coding		3	1	88579641	569
ENSMUSG00000109584	processed_pseudogene	Gm7997	ENSMUST00000210546	processed_pseudogene		8	1	80770691	980
ENSMUSG00000032024	protein_coding	Clmp	ENSMUST00000134153	processed_transcript		9	1	40774094	616
ENSMUSG00000114491	processed_transcript	A230103O09Rik	ENSMUST00000225918	lincRNA		13	1	39824383	704
ENSMUSG00000041355	protein_coding	Ssr2	ENSMUST00000192495	protein_coding		3	1	88579667	620
ENSMUSG00000014039	protein_coding	Prdm15	ENSMUST00000095849	protein_coding	principal2	16	-1	97851227	6346
ENSMUSG00000086014	antisense	Gm16095	ENSMUST00000128235	antisense		9	-1	40719986	253
ENSMUSG00000116863	processed_pseudogene	Gm49592	ENSMUST00000231602	processed_pseudogene		16	1	97801128	228
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000113972	protein_coding		19	1	3767421	4159
ENSMUSG00000041355	protein_coding	Ssr2	ENSMUST00000035785	protein_coding	principal1	3	1	88579671	1189
ENSMUSG00000053469	protein_coding	Tg	ENSMUST00000065916	protein_coding	principal1	15	1	66670753	8454
ENSMUSG00000025499	protein_coding	Hras	ENSMUST00000026572	protein_coding	principal1	7	-1	141193960	2828
ENSMUSG00000063975	protein_coding	Slco1a5	ENSMUST00000153268	nonsense_mediated_decay		6	-1	142275568	2365
ENSMUSG00000040710	protein_coding	St8sia4	ENSMUST00000043336	protein_coding	principal1	1	-1	95667571	5390
ENSMUSG00000087135	processed_transcript	Gm16096	ENSMUST00000149386	antisense		9	-1	40784181	819
ENSMUSG00000078206	protein_coding	Fthl17d	ENSMUST00000105004	protein_coding	principal1	X	-1	8986755	856
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000030251	protein_coding		4	1	102587558	1923
ENSMUSG00000040710	protein_coding	St8sia4	ENSMUST00000189556	protein_coding		1	-1	95667535	10027
ENSMUSG00000087135	processed_transcript	Gm16096	ENSMUST00000132716	processed_transcript		9	-1	40783461	639
ENSMUSG00000106674	lincRNA	Gm20005	ENSMUST00000202583	lincRNA		5	1	149641610	299
ENSMUSG00000053469	protein_coding	Tg	ENSMUST00000167512	processed_transcript		15	1	66701279	473
ENSMUSG00000025499	protein_coding	Hras	ENSMUST00000128993	retained_intron		7	-1	141193994	1704
ENSMUSG00000028664	protein_coding	Ephb2	ENSMUST00000105845	protein_coding	principal2	4	-1	136835988	10902
ENSMUSG00000040710	protein_coding	St8sia4	ENSMUST00000187936	retained_intron		1	-1	95667568	3102
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000113973	protein_coding		19	1	3767421	6130
ENSMUSG00000086168	lincRNA	Gm15221	ENSMUST00000144439	lincRNA		14	1	46436855	414
ENSMUSG00000040710	protein_coding	St8sia4	ENSMUST00000186853	retained_intron		1	-1	95667565	3612
ENSMUSG00000115168	lincRNA	Gm48910	ENSMUST00000226173	lincRNA		14	-1	46456456	513
ENSMUSG00000083468	processed_pseudogene	Gm9431	ENSMUST00000119765	processed_pseudogene		X	-1	9010077	1051
ENSMUSG00000044039	protein_coding	Olfr1288	ENSMUST00000214816	protein_coding	principal1	2	1	111474101	1326
ENSMUSG00000021040	protein_coding	Slirp	ENSMUST00000161023	protein_coding	principal2	12	1	87443896	2701
ENSMUSG00000044039	protein_coding	Olfr1288	ENSMUST00000104889	protein_coding	principal1	2	1	111478786	939
ENSMUSG00000028664	protein_coding	Ephb2	ENSMUST00000059287	protein_coding		4	-1	136835956	4804
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000097949	protein_coding		4	1	102589723	2465
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000155990	protein_coding		4	-1	131937211	3120
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000113968	protein_coding		19	1	3767523	3216
ENSMUSG00000025499	protein_coding	Hras	ENSMUST00000097957	protein_coding	principal1	7	-1	141194005	1199
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000151746	processed_transcript		4	-1	131937387	4458
ENSMUSG00000028525	protein_coding	Pde4b	ENSMUST00000106901	protein_coding		4	1	102589843	2129
ENSMUSG00000061195	protein_coding	Olfr1289	ENSMUST00000120021	protein_coding	alternative2	2	1	111480819	1643
ENSMUSG00000020009	protein_coding	Ifngr1	ENSMUST00000020188	protein_coding	principal1	10	1	19591949	2112
ENSMUSG00000021040	protein_coding	Slirp	ENSMUST00000160488	protein_coding	alternative2	12	1	87443912	802
ENSMUSG00000061195	protein_coding	Olfr1289	ENSMUST00000225425	retained_intron		2	1	111483349	1015
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000113970	protein_coding	principal1	19	1	3768033	2975
ENSMUSG00000061195	protein_coding	Olfr1289	ENSMUST00000207494	protein_coding	principal2	2	1	111483350	1014
ENSMUSG00000053469	protein_coding	Tg	ENSMUST00000163495	processed_transcript		15	1	66705290	3649
ENSMUSG00000025499	protein_coding	Hras	ENSMUST00000124314	protein_coding		7	-1	141192940	1073
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000155618	retained_intron		19	1	3768134	667
ENSMUSG00000050359	protein_coding	Sprr1a	ENSMUST00000054599	protein_coding	principal1	3	-1	92485895	806
ENSMUSG00000100777	lincRNA	4930598F16Rik	ENSMUST00000187352	lincRNA		1	-1	95716518	761
ENSMUSG00000021040	protein_coding	Slirp	ENSMUST00000077462	protein_coding		12	1	87443936	335
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000237440	protein_coding		19	1	3768146	1721
ENSMUSG00000102718	TEC	Gm37761	ENSMUST00000194989	TEC		1	1	95738196	2098
ENSMUSG00000020009	protein_coding	Ifngr1	ENSMUST00000110989	retained_intron		10	1	19591958	676
ENSMUSG00000025499	protein_coding	Hras	ENSMUST00000134008	nonsense_mediated_decay		7	-1	141191977	447
ENSMUSG00000020009	protein_coding	Ifngr1	ENSMUST00000171772	processed_transcript		10	1	19592053	443
ENSMUSG00000082222	processed_pseudogene	Gm14865	ENSMUST00000117523	processed_pseudogene		X	1	9030084	494
ENSMUSG00000020581	protein_coding	Agr2	ENSMUST00000020898	protein_coding	principal1	12	1	35992907	784
ENSMUSG00000021040	protein_coding	Slirp	ENSMUST00000160880	protein_coding		12	1	87443946	362
ENSMUSG00000028664	protein_coding	Ephb2	ENSMUST00000105846	protein_coding	alternative1	4	-1	136835843	3653
ENSMUSG00000053469	protein_coding	Tg	ENSMUST00000171045	protein_coding		15	1	66715889	3748
ENSMUSG00000027428	protein_coding	Rbbp9	ENSMUST00000028915	protein_coding	principal1	2	-1	144550869	2170
ENSMUSG00000020009	protein_coding	Ifngr1	ENSMUST00000172253	processed_transcript		10	1	19592062	321
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000152935	protein_coding		19	1	3768149	793
ENSMUSG00000025499	protein_coding	Hras	ENSMUST00000124971	nonsense_mediated_decay		7	-1	141193882	1122
ENSMUSG00000021039	protein_coding	Snw1	ENSMUST00000222579	retained_intron		12	-1	87454157	5083
ENSMUSG00000028664	protein_coding	Ephb2	ENSMUST00000156558	protein_coding		4	-1	136694040	828
ENSMUSG00000053469	protein_coding	Tg	ENSMUST00000167344	processed_transcript		15	1	66716531	460
ENSMUSG00000095809	protein_coding	Olfr1290	ENSMUST00000217611	protein_coding	principal1	2	-1	111493829	2729
ENSMUSG00000053469	protein_coding	Tg	ENSMUST00000172153	processed_transcript		15	1	66736250	2810
ENSMUSG00000115296	lincRNA	Gm48911	ENSMUST00000227092	lincRNA		14	-1	46463520	200
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000176262	protein_coding		19	1	3768166	3933
ENSMUSG00000020009	protein_coding	Ifngr1	ENSMUST00000164591	nonsense_mediated_decay		10	1	19592073	1974
ENSMUSG00000053469	protein_coding	Tg	ENSMUST00000166403	protein_coding		15	1	66798750	1254
ENSMUSG00000020581	protein_coding	Agr2	ENSMUST00000147861	retained_intron		12	1	35992907	907
ENSMUSG00000069631	protein_coding	Strada	ENSMUST00000122989	processed_transcript		11	-1	106202168	2083
ENSMUSG00000115083	lincRNA	Gm34756	ENSMUST00000227282	lincRNA		14	1	46481228	449
ENSMUSG00000020009	protein_coding	Ifngr1	ENSMUST00000168074	retained_intron		10	1	19605919	747
ENSMUSG00000095809	protein_coding	Olfr1290	ENSMUST00000208881	protein_coding		2	-1	111493763	411
ENSMUSG00000027428	protein_coding	Rbbp9	ENSMUST00000140340	processed_transcript		2	-1	144550790	727
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000176407	protein_coding		19	1	3768169	398
ENSMUSG00000115158	lincRNA	Gm48912	ENSMUST00000227980	lincRNA		14	-1	46516442	1123
ENSMUSG00000028664	protein_coding	Ephb2	ENSMUST00000144573	retained_intron		4	-1	136835974	2519
ENSMUSG00000025499	protein_coding	Hras	ENSMUST00000168550	protein_coding		7	-1	141194004	2272
ENSMUSG00000090603	unprocessed_pseudogene	Gm17186	ENSMUST00000171742	unprocessed_pseudogene		14	-1	51682065	456
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000176926	protein_coding		19	1	3768218	1551
ENSMUSG00000076477	TR_V_gene	Trbv21	ENSMUST00000195087	TR_V_gene		6	1	41202550	381
ENSMUSG00000028664	protein_coding	Ephb2	ENSMUST00000151502	retained_intron		4	-1	136661652	599
ENSMUSG00000095809	protein_coding	Olfr1290	ENSMUST00000208695	protein_coding		2	-1	111493797	527
ENSMUSG00000105993	protein_coding	Tex13c2	ENSMUST00000197237	protein_coding	principal1	X	1	42489691	1834
ENSMUSG00000100116	unprocessed_pseudogene	Gm20861	ENSMUST00000186824	unprocessed_pseudogene		Y	-1	86366423	693
ENSMUSG00000076477	TR_V_gene	Trbv21	ENSMUST00000103278	TR_V_gene	principal1	6	1	41202755	290
ENSMUSG00000095809	protein_coding	Olfr1290	ENSMUST00000099616	protein_coding	principal1	2	-1	111490156	939
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000176512	protein_coding		19	1	3768233	622
ENSMUSG00000099524	unprocessed_pseudogene	Gm20860	ENSMUST00000190842	unprocessed_pseudogene		Y	-1	86434894	696
ENSMUSG00000086144	antisense	Gm11379	ENSMUST00000154678	antisense		13	1	31797539	381
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000177355	protein_coding		19	1	3768547	624
ENSMUSG00000069014	transcribed_processed_pseudogene	Gm5641	ENSMUST00000091130	processed_transcript		3	1	54481438	1488
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000135586	retained_intron		19	1	3791720	4406
ENSMUSG00000069014	transcribed_processed_pseudogene	Gm5641	ENSMUST00000198699	transcribed_processed_pseudogene		3	1	54481460	1080
ENSMUSG00000110699	unprocessed_pseudogene	Gm20946	ENSMUST00000212367	unprocessed_pseudogene		8	1	20828353	461
ENSMUSG00000034271	protein_coding	Jdp2	ENSMUST00000177587	protein_coding	principal1	12	1	85599027	1645
ENSMUSG00000102988	TR_V_pseudogene	Trbv22	ENSMUST00000191697	TR_V_pseudogene		6	1	41212244	291
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000236012	retained_intron		19	1	3796530	772
ENSMUSG00000099902	processed_pseudogene	Gm12115	ENSMUST00000119969	processed_pseudogene		11	1	33172919	447
ENSMUSG00000034271	protein_coding	Jdp2	ENSMUST00000050687	protein_coding	principal1	12	1	85599416	1643
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000236861	retained_intron		19	1	3802073	802
ENSMUSG00000076478	TR_V_gene	Trbv23	ENSMUST00000193997	TR_V_gene	principal5	6	1	41216073	347
ENSMUSG00000076478	TR_V_gene	Trbv23	ENSMUST00000103279	TR_V_gene	alternative2	6	1	41216073	344
ENSMUSG00000019892	protein_coding	Lrriq1	ENSMUST00000166240	protein_coding	principal1	10	-1	103236322	5232
ENSMUSG00000034271	protein_coding	Jdp2	ENSMUST00000171754	protein_coding	principal1	12	1	85600018	1559
ENSMUSG00000063975	protein_coding	Slco1a5	ENSMUST00000111825	protein_coding	principal1	6	-1	142278836	2586
ENSMUSG00000102955	TR_V_pseudogene	Trbv24	ENSMUST00000194614	TR_V_pseudogene		6	1	41218091	347
ENSMUSG00000019892	protein_coding	Lrriq1	ENSMUST00000217834	retained_intron		10	-1	103146375	1192
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000235768	nonsense_mediated_decay		19	1	3802095	723
ENSMUSG00000086495	processed_transcript	Gm13778	ENSMUST00000146633	processed_transcript		2	-1	91053918	537
ENSMUSG00000058124	protein_coding	H2-M10.3	ENSMUST00000073546	protein_coding	principal1	17	-1	36368417	1593
ENSMUSG00000034271	protein_coding	Jdp2	ENSMUST00000222689	protein_coding		12	1	85602222	349
ENSMUSG00000063975	protein_coding	Slco1a5	ENSMUST00000081380	protein_coding	principal1	6	-1	142322981	2572
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000176125	retained_intron		19	1	3804394	755
ENSMUSG00000094326	transcribed_processed_pseudogene	Gm10045	ENSMUST00000178657	transcribed_processed_pseudogene		17	1	29308138	483
ENSMUSG00000019892	protein_coding	Lrriq1	ENSMUST00000020043	protein_coding		10	-1	103236322	2542
ENSMUSG00000086495	processed_transcript	Gm13778	ENSMUST00000144822	processed_transcript		2	-1	91053933	367
ENSMUSG00000092555	processed_pseudogene	Stk-ps1	ENSMUST00000173340	processed_pseudogene		17	-1	36398517	1074
ENSMUSG00000113165	bidirectional_promoter_lncRNA	Gm47863	ENSMUST00000223391	bidirectional_promoter_lncRNA		12	-1	85599191	2173
ENSMUSG00000063975	protein_coding	Slco1a5	ENSMUST00000111822	retained_intron		6	-1	142278836	2471
ENSMUSG00000085980	lincRNA	Gm12408	ENSMUST00000211577	lincRNA		4	1	45639744	1983
ENSMUSG00000085980	lincRNA	Gm12408	ENSMUST00000210118	lincRNA		4	1	45639795	773
ENSMUSG00000085980	lincRNA	Gm12408	ENSMUST00000209349	lincRNA		4	1	45639795	1548
ENSMUSG00000019892	protein_coding	Lrriq1	ENSMUST00000123364	protein_coding		10	-1	103236293	1839
ENSMUSG00000085980	lincRNA	Gm12408	ENSMUST00000209462	lincRNA		4	1	45639828	1394
ENSMUSG00000063975	protein_coding	Slco1a5	ENSMUST00000128446	protein_coding		6	-1	142322948	639
ENSMUSG00000046008	protein_coding	Pnlip	ENSMUST00000237451	processed_transcript		19	1	58652498	406
ENSMUSG00000078800	protein_coding	Bsph2	ENSMUST00000108526	protein_coding	principal1	7	-1	13571067	532
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000005518	protein_coding		19	1	3768118	1283
ENSMUSG00000114879	lincRNA	4930467J12Rik	ENSMUST00000224961	lincRNA		13	-1	114607084	534
ENSMUSG00000085980	lincRNA	Gm12408	ENSMUST00000151883	lincRNA		4	1	45639936	996
ENSMUSG00000085980	lincRNA	Gm12408	ENSMUST00000211200	lincRNA		4	1	45640528	913
ENSMUSG00000104473	TR_V_pseudogene	Trbv25	ENSMUST00000194700	TR_V_pseudogene		6	1	41221931	273
ENSMUSG00000078800	protein_coding	Bsph2	ENSMUST00000202285	nonsense_mediated_decay		7	-1	13571067	472
ENSMUSG00000090740	protein_coding	Gm17079	ENSMUST00000167231	protein_coding	principal1	14	-1	51695468	666
ENSMUSG00000083528	processed_pseudogene	Gm13432	ENSMUST00000118861	processed_pseudogene		2	-1	25554549	241
ENSMUSG00000100854	unprocessed_pseudogene	Gm28057	ENSMUST00000186603	unprocessed_pseudogene		Y	-1	86463426	615
ENSMUSG00000096890	unprocessed_pseudogene	Gm20797	ENSMUST00000177894	unprocessed_pseudogene		8	-1	20842350	383
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000052699	protein_coding	principal1	19	1	3767421	3290
ENSMUSG00000068748	protein_coding	Ptprz1	ENSMUST00000090568	protein_coding	principal3	6	1	22875502	8068
ENSMUSG00000101092	unprocessed_pseudogene	Gm21796	ENSMUST00000187116	unprocessed_pseudogene		Y	-1	86500312	696
ENSMUSG00000046008	protein_coding	Pnlip	ENSMUST00000237426	retained_intron		19	1	58670365	689
ENSMUSG00000092508	unprocessed_pseudogene	H2-M10.5-ps1	ENSMUST00000174378	unprocessed_pseudogene		17	-1	36409549	939
ENSMUSG00000045098	protein_coding	Kmt5b	ENSMUST00000113977	protein_coding		19	1	3767421	6002
ENSMUSG00000092231	processed_pseudogene	Lgals1-ps1	ENSMUST00000173500	processed_pseudogene		17	-1	36436270	368
ENSMUSG00000068748	protein_coding	Ptprz1	ENSMUST00000202579	protein_coding		6	1	22875722	6871
ENSMUSG00000101532	processed_pseudogene	Zbed4-ps1	ENSMUST00000186734	processed_pseudogene		7	1	13639107	3466
ENSMUSG00000117912	antisense	Gm50383	ENSMUST00000235621	antisense		19	-1	3867673	382
ENSMUSG00000021039	protein_coding	Snw1	ENSMUST00000021428	protein_coding	principal1	12	-1	87472274	2232
ENSMUSG00000020696	protein_coding	Rffl	ENSMUST00000074515	protein_coding	principal1	11	-1	82829043	4973
ENSMUSG00000068748	protein_coding	Ptprz1	ENSMUST00000202102	protein_coding	alternative2	6	1	22875777	4947
ENSMUSG00000068748	protein_coding	Ptprz1	ENSMUST00000202341	retained_intron		6	1	22972505	435
ENSMUSG00000020806	protein_coding	Rhbdf2	ENSMUST00000103029	protein_coding	principal1	11	-1	116624200	3593
ENSMUSG00000068748	protein_coding	Ptprz1	ENSMUST00000201827	retained_intron		6	1	22986309	1394
ENSMUSG00000068748	protein_coding	Ptprz1	ENSMUST00000200769	retained_intron		6	1	23048272	3232
ENSMUSG00000040610	protein_coding	Tlx3	ENSMUST00000037746	protein_coding	principal1	11	-1	33203589	1533
ENSMUSG00000078799	protein_coding	Sult2a5	ENSMUST00000108525	protein_coding	principal1	7	1	13623967	1046
ENSMUSG00000020806	protein_coding	Rhbdf2	ENSMUST00000103028	protein_coding	principal1	11	-1	116627019	3855
ENSMUSG00000021039	protein_coding	Snw1	ENSMUST00000223119	retained_intron		12	-1	87472269	479
ENSMUSG00000099400	processed_pseudogene	Kat6b-ps1	ENSMUST00000187624	processed_pseudogene		7	1	13653996	3433
ENSMUSG00000102633	TEC	Gm38224	ENSMUST00000191648	TEC		1	1	21234722	2100
ENSMUSG00000076479	TR_V_gene	Trbv26	ENSMUST00000193064	TR_V_gene	principal5	6	1	41227505	367
ENSMUSG00000076479	TR_V_gene	Trbv26	ENSMUST00000103280	TR_V_gene	alternative2	6	1	41227525	344
ENSMUSG00000020696	protein_coding	Rffl	ENSMUST00000021036	protein_coding		11	-1	82829031	1719
ENSMUSG00000020806	protein_coding	Rhbdf2	ENSMUST00000138125	processed_transcript		11	-1	116602595	815
ENSMUSG00000068506	protein_coding	Gm5800	ENSMUST00000095916	protein_coding	principal1	14	-1	51717183	903
ENSMUSG00000046807	protein_coding	Lrrc75b	ENSMUST00000220172	protein_coding		10	-1	75553894	637
ENSMUSG00000096626	protein_coding	Gm21861	ENSMUST00000190806	protein_coding	principal1	Y	-1	58814597	931
ENSMUSG00000020696	protein_coding	Rffl	ENSMUST00000103218	protein_coding		11	-1	82829043	1264
ENSMUSG00000096626	protein_coding	Gm21861	ENSMUST00000179480	protein_coding		Y	-1	58813165	498
ENSMUSG00000020806	protein_coding	Rhbdf2	ENSMUST00000126819	retained_intron		11	-1	116624247	2489
ENSMUSG00000050295	protein_coding	Foxc1	ENSMUST00000062292	protein_coding	principal1	13	1	31806633	5844
ENSMUSG00000101905	antisense	4930439D14Rik	ENSMUST00000186765	antisense		1	1	156939838	359
ENSMUSG00000092614	unprocessed_pseudogene	Vmn2r-ps47	ENSMUST00000174515	unprocessed_pseudogene		7	-1	8519810	2557
ENSMUSG00000100085	lincRNA	Gm21413	ENSMUST00000189224	lincRNA		Y	-1	58915254	174
ENSMUSG00000103325	TEC	Gm10531	ENSMUST00000193527	TEC		1	1	157043547	2303
ENSMUSG00000101768	lincRNA	Gm28694	ENSMUST00000190681	lincRNA		1	-1	157054034	722
ENSMUSG00000046807	protein_coding	Lrrc75b	ENSMUST00000051129	protein_coding	principal1	10	-1	75560330	4601
ENSMUSG00000101424	lincRNA	Gm28073	ENSMUST00000187174	lincRNA		Y	-1	58958645	622
ENSMUSG00000101424	lincRNA	Gm28073	ENSMUST00000190508	lincRNA		Y	-1	58958645	437
ENSMUSG00000002104	protein_coding	Rapsn	ENSMUST00000111445	protein_coding		2	1	91035620	1450
ENSMUSG00000073860	lincRNA	Gm829	ENSMUST00000146622	lincRNA		4	1	45683589	722
ENSMUSG00000046008	protein_coding	Pnlip	ENSMUST00000057270	protein_coding	principal1	19	1	58670365	1487
ENSMUSG00000073860	lincRNA	Gm829	ENSMUST00000123741	lincRNA		4	1	45683589	465
ENSMUSG00000048540	protein_coding	Nhlh2	ENSMUST00000196324	protein_coding	principal1	3	1	102010076	2647
ENSMUSG00000085305	lincRNA	Gm12410	ENSMUST00000124989	lincRNA		4	1	45715169	405
ENSMUSG00000069631	protein_coding	Strada	ENSMUST00000007444	protein_coding	alternative1	11	-1	106193536	2099
ENSMUSG00000094534	processed_pseudogene	Gm20945	ENSMUST00000178122	processed_pseudogene		8	-1	20870650	1145
ENSMUSG00000046008	protein_coding	Pnlip	ENSMUST00000238108	protein_coding		19	1	58670406	704
ENSMUSG00000048540	protein_coding	Nhlh2	ENSMUST00000066187	protein_coding	principal1	3	1	102010146	3761
ENSMUSG00000048540	protein_coding	Nhlh2	ENSMUST00000198675	protein_coding	principal1	3	1	102010155	3943
ENSMUSG00000020696	protein_coding	Rffl	ENSMUST00000126660	protein_coding		11	-1	82846092	671
ENSMUSG00000002104	protein_coding	Rapsn	ENSMUST00000111446	protein_coding		2	1	91035627	1458
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000107258	protein_coding	alternative2	4	-1	81421242	7241
ENSMUSG00000069631	protein_coding	Strada	ENSMUST00000103072	protein_coding	principal3	11	-1	106193562	1517
ENSMUSG00000002104	protein_coding	Rapsn	ENSMUST00000050323	protein_coding	principal1	2	1	91035641	1606
ENSMUSG00000069631	protein_coding	Strada	ENSMUST00000152008	protein_coding		11	-1	106193539	708
ENSMUSG00000026035	protein_coding	Ppil3	ENSMUST00000117069	protein_coding	principal1	1	-1	58445429	1363
ENSMUSG00000028709	protein_coding	Mob3c	ENSMUST00000030477	protein_coding	principal1	4	1	115828092	2884
ENSMUSG00000026035	protein_coding	Ppil3	ENSMUST00000114348	protein_coding	principal1	1	-1	58445434	1033
ENSMUSG00000002104	protein_coding	Rapsn	ENSMUST00000128008	retained_intron		2	1	91042785	686
ENSMUSG00000069631	protein_coding	Strada	ENSMUST00000106867	protein_coding		11	-1	106193572	3386
ENSMUSG00000098456	protein_coding	Gm12117	ENSMUST00000184486	translated_processed_pseudogene		11	-1	33276737	980
ENSMUSG00000098456	protein_coding	Gm12117	ENSMUST00000183831	protein_coding	principal1	11	-1	33276334	456
ENSMUSG00000028709	protein_coding	Mob3c	ENSMUST00000144839	retained_intron		4	1	115828097	634
ENSMUSG00000025384	protein_coding	Faap100	ENSMUST00000135635	retained_intron		11	-1	120378735	3766
ENSMUSG00000051885	polymorphic_pseudogene	Olfr664	ENSMUST00000072887	polymorphic_pseudogene	principal5	7	-1	104734350	966
ENSMUSG00000028709	protein_coding	Mob3c	ENSMUST00000148409	protein_coding		4	1	115828658	388
ENSMUSG00000051885	polymorphic_pseudogene	Olfr664	ENSMUST00000211596	protein_coding	alternative2	7	-1	104734362	921
ENSMUSG00000074704	protein_coding	Rad21l	ENSMUST00000180195	protein_coding	principal2	2	-1	151668533	1659
ENSMUSG00000109649	protein_coding	Gm45521	ENSMUST00000211339	protein_coding	principal1	14	1	7957288	676
ENSMUSG00000020696	protein_coding	Rffl	ENSMUST00000093975	protein_coding		11	-1	82870744	3575
ENSMUSG00000026035	protein_coding	Ppil3	ENSMUST00000081677	protein_coding	principal1	1	-1	58445486	896
ENSMUSG00000074704	protein_coding	Rad21l	ENSMUST00000096439	protein_coding	alternative2	2	-1	151668533	1650
ENSMUSG00000026035	protein_coding	Ppil3	ENSMUST00000186242	processed_transcript		1	-1	58432185	425
ENSMUSG00000020696	protein_coding	Rffl	ENSMUST00000108173	protein_coding	principal1	11	-1	82871210	3489
ENSMUSG00000043073	protein_coding	Usp17le	ENSMUST00000211384	protein_coding	principal1	7	-1	104777470	1885
ENSMUSG00000105395	processed_pseudogene	Gm42672	ENSMUST00000197821	processed_pseudogene		3	1	95461191	352
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000128694	nonsense_mediated_decay		19	1	3851773	2683
ENSMUSG00000043073	protein_coding	Usp17le	ENSMUST00000053464	protein_coding		7	-1	104777470	1626
ENSMUSG00000020696	protein_coding	Rffl	ENSMUST00000071152	protein_coding		11	-1	82871210	3633
ENSMUSG00000099343	antisense	Gm28836	ENSMUST00000185842	antisense		1	-1	21271593	633
ENSMUSG00000026035	protein_coding	Ppil3	ENSMUST00000114345	protein_coding		1	-1	58445369	1175
ENSMUSG00000051851	protein_coding	Rtl8c	ENSMUST00000063384	protein_coding	principal1	X	1	53608032	401
ENSMUSG00000026035	protein_coding	Ppil3	ENSMUST00000190048	protein_coding		1	-1	58445439	391
ENSMUSG00000026035	protein_coding	Ppil3	ENSMUST00000185990	protein_coding		1	-1	58445482	392
ENSMUSG00000104830	processed_transcript	5830487J09Rik	ENSMUST00000198600	sense_intronic		5	1	123366472	1256
ENSMUSG00000022840	protein_coding	Adcy5	ENSMUST00000114913	protein_coding	principal1	16	1	35154877	7008
ENSMUSG00000104830	processed_transcript	5830487J09Rik	ENSMUST00000200118	TEC		5	1	123366999	1921
ENSMUSG00000026035	protein_coding	Ppil3	ENSMUST00000124550	retained_intron		1	-1	58445176	487
ENSMUSG00000026035	protein_coding	Ppil3	ENSMUST00000188896	retained_intron		1	-1	58440968	2139
ENSMUSG00000020393	protein_coding	Kremen1	ENSMUST00000020662	protein_coding	principal1	11	-1	5261558	4856
ENSMUSG00000022840	protein_coding	Adcy5	ENSMUST00000232470	retained_intron		16	1	35270662	374
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000102830	protein_coding	principal2	4	-1	81442807	7512
ENSMUSG00000116766	TEC	Gm49702	ENSMUST00000231960	TEC		16	1	35284754	1797
ENSMUSG00000020393	protein_coding	Kremen1	ENSMUST00000151978	protein_coding		11	-1	5238448	3183
ENSMUSG00000029438	protein_coding	Bcl7a	ENSMUST00000120593	processed_transcript		5	1	123343834	4161
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000131418	retained_intron		4	-1	81285538	2215
ENSMUSG00000100264	lincRNA	Gm21419	ENSMUST00000189495	lincRNA		Y	-1	58981489	173
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000134726	protein_coding		4	-1	81295584	1773
ENSMUSG00000079593	protein_coding	Gm14597	ENSMUST00000129769	protein_coding	principal5	X	-1	53579970	715
ENSMUSG00000092204	unprocessed_pseudogene	Vmn2r-ps49	ENSMUST00000173160	unprocessed_pseudogene		7	-1	8610512	3551
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000220807	protein_coding	alternative2	4	-1	81442644	6295
ENSMUSG00000079593	protein_coding	Gm14597	ENSMUST00000123034	protein_coding	alternative2	X	-1	53608979	563
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000169922	protein_coding	principal1	7	-1	73541746	9085
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000156441	retained_intron		4	-1	81284699	571
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000131547	protein_coding		4	-1	81292612	628
ENSMUSG00000015721	protein_coding	Nlrp5	ENSMUST00000086341	protein_coding	alternative2	7	1	23385889	3471
ENSMUSG00000100715	lincRNA	Gm28074	ENSMUST00000190424	lincRNA		Y	-1	59025399	1497
ENSMUSG00000100715	lincRNA	Gm28074	ENSMUST00000190765	lincRNA		Y	-1	59024946	437
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000124805	retained_intron		4	-1	81288071	670
ENSMUSG00000021023	protein_coding	Prorp	ENSMUST00000184980	protein_coding	alternative2	12	1	55299577	888
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000129732	retained_intron		4	-1	81292829	754
ENSMUSG00000100582	lincRNA	Gm21428	ENSMUST00000186550	lincRNA		Y	-1	59047806	174
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000140425	retained_intron		4	-1	81293174	468
ENSMUSG00000118486	unitary_pseudogene	Gm30172	ENSMUST00000238466	unitary_pseudogene		11	1	5274085	693
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000131197	protein_coding		4	-1	81326949	806
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000125288	processed_transcript		4	-1	81333041	441
ENSMUSG00000025384	protein_coding	Faap100	ENSMUST00000026448	protein_coding	principal1	11	-1	120378764	3193
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000134572	protein_coding		4	-1	81335830	416
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000141995	protein_coding		4	-1	81363115	1045
ENSMUSG00000025384	protein_coding	Faap100	ENSMUST00000129203	retained_intron		11	-1	120370888	502
ENSMUSG00000025384	protein_coding	Faap100	ENSMUST00000134771	processed_transcript		11	-1	120374167	576
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000142273	retained_intron		4	-1	81442815	2749
ENSMUSG00000025384	protein_coding	Faap100	ENSMUST00000154826	retained_intron		11	-1	120378736	2934
ENSMUSG00000021023	protein_coding	Prorp	ENSMUST00000021411	protein_coding	principal2	12	1	55302637	3122
ENSMUSG00000025384	protein_coding	Faap100	ENSMUST00000148520	processed_transcript		11	-1	120378709	1779
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000199809	nonsense_mediated_decay		7	-1	73468587	5289
ENSMUSG00000021023	protein_coding	Prorp	ENSMUST00000184249	retained_intron		12	1	55302750	3386
ENSMUSG00000025384	protein_coding	Faap100	ENSMUST00000153015	processed_transcript		11	-1	120378474	728
ENSMUSG00000025384	protein_coding	Faap100	ENSMUST00000152346	processed_transcript		11	-1	120378735	747
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000208458	nonsense_mediated_decay		7	-1	73444251	745
ENSMUSG00000092437	processed_pseudogene	Rpl9-ps9	ENSMUST00000173020	processed_pseudogene		17	-1	36444749	573
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000173785	protein_coding		7	-1	73447233	487
ENSMUSG00000021023	protein_coding	Prorp	ENSMUST00000184766	protein_coding	principal2	12	1	55303243	2250
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000147765	retained_intron		3	1	95434388	2557
ENSMUSG00000115827	processed_pseudogene	Gm49261	ENSMUST00000228873	processed_pseudogene		14	1	51741105	218
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000181971	nonsense_mediated_decay		7	-1	73455592	667
ENSMUSG00000021023	protein_coding	Prorp	ENSMUST00000183475	protein_coding	alternative2	12	1	55303261	2204
ENSMUSG00000028402	protein_coding	Mpdz	ENSMUST00000107262	protein_coding	alternative2	4	-1	81442805	7518
ENSMUSG00000037089	protein_coding	Slc35b2	ENSMUST00000224905	protein_coding	principal1	17	1	45563874	1906
ENSMUSG00000021023	protein_coding	Prorp	ENSMUST00000183654	protein_coding		12	1	55303286	943
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000038366	processed_transcript		7	-1	73461733	755
ENSMUSG00000037089	protein_coding	Slc35b2	ENSMUST00000225226	retained_intron		17	1	45563948	361
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000199831	processed_transcript		7	-1	73481002	582
ENSMUSG00000037089	protein_coding	Slc35b2	ENSMUST00000226086	protein_coding		17	1	45563960	850
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000200423	protein_coding		7	-1	73481004	339
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000198225	retained_intron		7	-1	73478828	392
ENSMUSG00000037089	protein_coding	Slc35b2	ENSMUST00000224559	retained_intron		17	1	45563964	2326
ENSMUSG00000022372	protein_coding	Sla	ENSMUST00000164163	protein_coding	principal3	15	-1	66831646	2952
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000199601	nonsense_mediated_decay		7	-1	73502117	558
ENSMUSG00000029438	protein_coding	Bcl7a	ENSMUST00000031391	protein_coding	principal1	5	1	123344448	4718
ENSMUSG00000037089	protein_coding	Slc35b2	ENSMUST00000233139	processed_transcript		17	1	45564024	376
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000199641	protein_coding		7	-1	73502036	360
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000226899	nonsense_mediated_decay		17	1	17827158	1147
ENSMUSG00000015721	protein_coding	Nlrp5	ENSMUST00000015866	protein_coding	principal4	7	1	23385901	3508
ENSMUSG00000061816	protein_coding	Myl1	ENSMUST00000186202	protein_coding		1	-1	66935637	874
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000026895	protein_coding		7	-1	73541745	1571
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000206665	retained_intron		7	-1	73503569	1632
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000172704	protein_coding		7	-1	73537621	748
ENSMUSG00000037089	protein_coding	Slc35b2	ENSMUST00000223987	protein_coding		17	1	45564205	1766
ENSMUSG00000022372	protein_coding	Sla	ENSMUST00000168589	protein_coding	principal3	15	-1	66801593	1412
ENSMUSG00000025934	protein_coding	Gsta3	ENSMUST00000027067	protein_coding	principal1	1	1	21240589	1457
ENSMUSG00000037089	protein_coding	Slc35b2	ENSMUST00000224341	protein_coding		17	1	45564739	439
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000228490	protein_coding		17	1	17827324	377
ENSMUSG00000025934	protein_coding	Gsta3	ENSMUST00000121676	protein_coding	principal1	1	1	21240607	894
ENSMUSG00000029438	protein_coding	Bcl7a	ENSMUST00000117971	protein_coding		5	1	123344500	4642
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000197642	protein_coding		7	-1	73541736	896
ENSMUSG00000024317	protein_coding	Rnf138	ENSMUST00000234107	protein_coding	principal1	18	1	21001341	2422
ENSMUSG00000087336	antisense	Gm15860	ENSMUST00000197262	antisense		5	-1	123344335	360
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000197800	retained_intron		7	-1	73541830	3741
ENSMUSG00000024317	protein_coding	Rnf138	ENSMUST00000234536	protein_coding	principal1	18	1	21001908	2271
ENSMUSG00000015721	protein_coding	Nlrp5	ENSMUST00000139661	nonsense_mediated_decay		7	1	23404102	3303
ENSMUSG00000015721	protein_coding	Nlrp5	ENSMUST00000108441	protein_coding	alternative2	7	1	23404102	3375
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000133912	processed_transcript		17	1	17830719	494
ENSMUSG00000087336	antisense	Gm15860	ENSMUST00000124914	antisense		5	-1	123344437	422
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000178408	retained_intron		17	1	17830893	1174
ENSMUSG00000024317	protein_coding	Rnf138	ENSMUST00000052396	protein_coding		18	1	21001991	2769
ENSMUSG00000015721	protein_coding	Nlrp5	ENSMUST00000133237	nonsense_mediated_decay		7	1	23404102	3371
ENSMUSG00000022372	protein_coding	Sla	ENSMUST00000168522	protein_coding	alternative2	15	-1	66831829	1143
ENSMUSG00000087336	antisense	Gm15860	ENSMUST00000137257	antisense		5	-1	123341899	506
ENSMUSG00000081300	processed_pseudogene	Gm14587	ENSMUST00000121714	processed_pseudogene		X	-1	43412743	658
ENSMUSG00000015721	protein_coding	Nlrp5	ENSMUST00000207536	retained_intron		7	1	23417884	2284
ENSMUSG00000024317	protein_coding	Rnf138	ENSMUST00000234545	protein_coding		18	1	21002095	1769
ENSMUSG00000083098	processed_pseudogene	Gm14578	ENSMUST00000122166	processed_pseudogene		X	-1	42889120	391
ENSMUSG00000025934	protein_coding	Gsta3	ENSMUST00000124990	protein_coding		1	1	21240629	742
ENSMUSG00000086229	processed_pseudogene	Gm4887	ENSMUST00000122230	processed_pseudogene		7	1	104821204	1053
ENSMUSG00000024317	protein_coding	Rnf138	ENSMUST00000234169	retained_intron		18	1	21010724	6766
ENSMUSG00000025934	protein_coding	Gsta3	ENSMUST00000190711	retained_intron		1	1	21253521	2792
ENSMUSG00000037089	protein_coding	Slc35b2	ENSMUST00000041353	protein_coding		17	1	45563964	2326
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000200492	processed_transcript		7	-1	73541746	1196
ENSMUSG00000022372	protein_coding	Sla	ENSMUST00000164939	retained_intron		15	-1	66803749	6572
ENSMUSG00000021022	protein_coding	Ppp2r3c	ENSMUST00000021410	protein_coding	principal1	12	-1	55302998	4216
ENSMUSG00000024317	protein_coding	Rnf138	ENSMUST00000072847	protein_coding		18	1	21001341	3002
ENSMUSG00000070426	protein_coding	Rnf121	ENSMUST00000096639	protein_coding	principal1	7	-1	102065158	2249
ENSMUSG00000083738	processed_pseudogene	Gm14592	ENSMUST00000117201	processed_pseudogene		X	1	53623279	560
ENSMUSG00000078671	protein_coding	Chd2	ENSMUST00000200218	processed_transcript		7	-1	73541525	1387
ENSMUSG00000045835	protein_coding	Hdgfl1	ENSMUST00000055915	protein_coding	principal1	13	-1	26770165	1993
ENSMUSG00000100817	lincRNA	Gm29302	ENSMUST00000187209	lincRNA		Y	-1	86509519	2167
ENSMUSG00000021022	protein_coding	Ppp2r3c	ENSMUST00000219809	processed_transcript		12	-1	55299022	518
ENSMUSG00000108812	TEC	C130083A15Rik	ENSMUST00000205707	TEC		7	-1	73528725	1460
ENSMUSG00000022372	protein_coding	Sla	ENSMUST00000100572	protein_coding	principal3	15	-1	66812593	2626
ENSMUSG00000020100	protein_coding	Slc29a3	ENSMUST00000117513	protein_coding	principal1	10	-1	60752782	5240
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000072055	protein_coding	principal3	19	1	3851797	2549
ENSMUSG00000021022	protein_coding	Ppp2r3c	ENSMUST00000218116	retained_intron		12	-1	55302662	1981
ENSMUSG00000070426	protein_coding	Rnf121	ENSMUST00000089052	protein_coding		7	-1	102065469	2344
ENSMUSG00000102110	lincRNA	Gm28440	ENSMUST00000186328	lincRNA		Y	1	86540206	1499
ENSMUSG00000062369	protein_coding	Usp17lb	ENSMUST00000106814	protein_coding	alternative2	7	-1	104842603	1558
ENSMUSG00000108563	antisense	Gm44686	ENSMUST00000206776	antisense		7	1	73538013	540
ENSMUSG00000114342	antisense	4921520N01Rik	ENSMUST00000224024	antisense		13	1	26769393	3335
ENSMUSG00000070426	protein_coding	Rnf121	ENSMUST00000106953	protein_coding		7	-1	102060476	2545
ENSMUSG00000108741	TEC	Gm44553	ENSMUST00000206316	TEC		7	-1	73460633	2037
ENSMUSG00000020100	protein_coding	Slc29a3	ENSMUST00000119595	protein_coding		10	-1	60752782	3123
ENSMUSG00000102110	lincRNA	Gm28440	ENSMUST00000190645	lincRNA		Y	1	86540659	438
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000172097	protein_coding	principal1	17	1	17831004	1073
ENSMUSG00000100973	unprocessed_pseudogene	Gm29299	ENSMUST00000185609	unprocessed_pseudogene		Y	1	86602267	923
ENSMUSG00000070426	protein_coding	Rnf121	ENSMUST00000149976	retained_intron		7	-1	102024469	619
ENSMUSG00000062369	protein_coding	Usp17lb	ENSMUST00000076501	protein_coding	principal2	7	-1	104842504	1407
ENSMUSG00000020100	protein_coding	Slc29a3	ENSMUST00000150845	nonsense_mediated_decay		10	-1	60752783	2107
ENSMUSG00000070426	protein_coding	Rnf121	ENSMUST00000131104	protein_coding		7	-1	102065117	508
ENSMUSG00000016150	protein_coding	Tenm1	ENSMUST00000126161	retained_intron		X	-1	43429126	4548
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000139969	nonsense_mediated_decay		17	1	17831064	1146
ENSMUSG00000005220	protein_coding	Corin	ENSMUST00000167460	protein_coding	alternative2	5	-1	72504473	4639
ENSMUSG00000020100	protein_coding	Slc29a3	ENSMUST00000127386	retained_intron		10	-1	60724316	1410
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000125411	retained_intron		19	1	3851810	1627
ENSMUSG00000026036	protein_coding	Nif3l1	ENSMUST00000087521	protein_coding	principal1	1	1	58445151	3769
ENSMUSG00000025219	protein_coding	Fgf8	ENSMUST00000026240	protein_coding	principal4	19	-1	45742874	1117
ENSMUSG00000115509	antisense	Gm49012	ENSMUST00000226451	antisense		14	1	34591092	1558
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000125859	retained_intron		19	1	3851810	4652
ENSMUSG00000020100	protein_coding	Slc29a3	ENSMUST00000144989	processed_transcript		10	-1	60752794	606
ENSMUSG00000070426	protein_coding	Rnf121	ENSMUST00000156119	processed_transcript		7	-1	102065158	364
ENSMUSG00000082367	processed_pseudogene	Gm12363	ENSMUST00000122250	processed_pseudogene		4	1	34842985	668
ENSMUSG00000070426	protein_coding	Rnf121	ENSMUST00000130074	protein_coding		7	-1	102065044	446
ENSMUSG00000026036	protein_coding	Nif3l1	ENSMUST00000114337	protein_coding		1	1	58445267	2168
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000177859	retained_intron		17	1	17831180	680
ENSMUSG00000081345	unprocessed_pseudogene	Olfr1159-ps1	ENSMUST00000117651	unprocessed_pseudogene		2	-1	87999189	913
ENSMUSG00000005220	protein_coding	Corin	ENSMUST00000005352	protein_coding	principal3	5	-1	72504208	4862
ENSMUSG00000078622	protein_coding	Ccdc47	ENSMUST00000002043	protein_coding	principal1	11	-1	106216344	5193
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000154467	retained_intron		19	1	3851832	3605
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000124219	retained_intron		19	1	3851832	3574
ENSMUSG00000078622	protein_coding	Ccdc47	ENSMUST00000106865	protein_coding		11	-1	106204428	704
ENSMUSG00000054568	protein_coding	Usp17la	ENSMUST00000067695	protein_coding	principal1	7	1	104857009	2656
ENSMUSG00000005220	protein_coding	Corin	ENSMUST00000175766	protein_coding		5	-1	72504433	2919
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000012759	processed_transcript		17	1	17831180	762
ENSMUSG00000005220	protein_coding	Corin	ENSMUST00000177290	protein_coding	alternative2	5	-1	72504439	2943
ENSMUSG00000078622	protein_coding	Ccdc47	ENSMUST00000125383	protein_coding		11	-1	106205435	1003
ENSMUSG00000005220	protein_coding	Corin	ENSMUST00000176974	protein_coding		5	-1	72504439	3021
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000150302	protein_coding		17	1	17831444	474
ENSMUSG00000078622	protein_coding	Ccdc47	ENSMUST00000137915	protein_coding		11	-1	106202905	462
ENSMUSG00000026036	protein_coding	Nif3l1	ENSMUST00000129759	nonsense_mediated_decay		1	1	58445628	767
ENSMUSG00000025219	protein_coding	Fgf8	ENSMUST00000111928	protein_coding	alternative2	19	-1	45742915	1056
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000137228	retained_intron		17	1	17832035	174
ENSMUSG00000107595	TEC	Gm44441	ENSMUST00000203642	TEC		6	1	103564356	2475
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000025760	protein_coding	alternative2	19	1	3852076	2319
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000178056	retained_intron		17	1	17832952	4074
ENSMUSG00000027840	protein_coding	Wnt2b	ENSMUST00000029429	protein_coding	principal1	3	-1	104961921	3318
ENSMUSG00000078622	protein_coding	Ccdc47	ENSMUST00000153982	processed_transcript		11	-1	106205542	922
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000155293	retained_intron		17	1	17835949	648
ENSMUSG00000005220	protein_coding	Corin	ENSMUST00000176320	retained_intron		5	-1	72360699	675
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000052338	retained_intron		17	1	17837504	538
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000139655	nonsense_mediated_decay		19	1	3852101	721
ENSMUSG00000029833	protein_coding	Trim24	ENSMUST00000153004	retained_intron		6	1	37870811	3048
ENSMUSG00000080002	processed_pseudogene	Gm5566	ENSMUST00000116118	processed_pseudogene		5	-1	149661223	459
ENSMUSG00000026036	protein_coding	Nif3l1	ENSMUST00000151272	protein_coding		1	1	58445729	576
ENSMUSG00000027840	protein_coding	Wnt2b	ENSMUST00000198108	retained_intron		3	-1	104961721	1308
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000154301	nonsense_mediated_decay		17	1	17837694	504
ENSMUSG00000005220	protein_coding	Corin	ENSMUST00000176439	processed_transcript		5	-1	72380288	467
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000125640	protein_coding		19	1	3852363	689
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000019220	protein_coding	principal4	7	1	16815889	3535
ENSMUSG00000105925	sense_intronic	Gm43846	ENSMUST00000200502	sense_intronic		3	-1	104958373	932
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000179350	retained_intron		17	1	17838281	333
ENSMUSG00000026036	protein_coding	Nif3l1	ENSMUST00000140723	retained_intron		1	1	58449167	710
ENSMUSG00000020654	protein_coding	Adcy3	ENSMUST00000124505	protein_coding	alternative1	12	1	4133104	4962
ENSMUSG00000026036	protein_coding	Nif3l1	ENSMUST00000185578	retained_intron		1	1	58453404	2785
ENSMUSG00000084076	processed_pseudogene	Gm14600	ENSMUST00000121032	processed_pseudogene		X	1	53633336	630
ENSMUSG00000080316	protein_coding	Spaca6	ENSMUST00000178888	retained_intron		17	1	17838572	500
ENSMUSG00000026036	protein_coding	Nif3l1	ENSMUST00000188295	retained_intron		1	1	58457685	423
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000153343	nonsense_mediated_decay		19	1	3874664	744
ENSMUSG00000093771	lincRNA	AU023070	ENSMUST00000176972	lincRNA		5	-1	72497104	387
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000148325	processed_transcript		19	1	3875365	275
ENSMUSG00000093644	processed_pseudogene	Gm19560	ENSMUST00000177510	processed_pseudogene		5	1	72409444	514
ENSMUSG00000029833	protein_coding	Trim24	ENSMUST00000149828	retained_intron		6	1	37870811	2722
ENSMUSG00000020654	protein_coding	Adcy3	ENSMUST00000152065	protein_coding	alternative1	12	1	4133397	4728
ENSMUSG00000026036	protein_coding	Nif3l1	ENSMUST00000171597	protein_coding	principal1	1	1	58447631	2098
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000146443	protein_coding		4	-1	131967845	3278
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000146463	retained_intron		19	1	3875379	600
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000127544	processed_transcript		19	1	3875405	547
ENSMUSG00000009214	protein_coding	Mymk	ENSMUST00000009358	protein_coding	principal1	2	-1	27072179	1382
ENSMUSG00000061816	protein_coding	Myl1	ENSMUST00000027151	protein_coding		1	-1	66945143	1082
ENSMUSG00000024843	protein_coding	Chka	ENSMUST00000125013	retained_intron		19	1	3891731	875
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000135579	protein_coding		4	-1	131967876	3654
ENSMUSG00000112841	TEC	Gm48752	ENSMUST00000217743	TEC		10	1	88602472	2869
ENSMUSG00000009214	protein_coding	Mymk	ENSMUST00000163967	protein_coding		2	-1	27067868	1210
ENSMUSG00000082848	antisense	Gm16066	ENSMUST00000118575	antisense		19	-1	3852419	1086
ENSMUSG00000024924	protein_coding	Vldlr	ENSMUST00000172302	protein_coding	alternative1	19	1	27217020	3855
ENSMUSG00000117779	processed_pseudogene	Gm19209	ENSMUST00000236552	processed_pseudogene		19	-1	3822389	626
ENSMUSG00000114957	lincRNA	Gm47316	ENSMUST00000224937	lincRNA		13	-1	39884381	1517
ENSMUSG00000021311	protein_coding	Mtr	ENSMUST00000099856	protein_coding	principal1	13	-1	12258095	8294
ENSMUSG00000020654	protein_coding	Adcy3	ENSMUST00000127756	protein_coding	principal3	12	1	4133402	4672
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000108495	protein_coding	alternative1	7	1	16816317	3082
ENSMUSG00000024924	protein_coding	Vldlr	ENSMUST00000163729	processed_transcript		19	1	27217357	511
ENSMUSG00000098010	processed_pseudogene	Gm21542	ENSMUST00000182307	processed_pseudogene		19	1	23666591	993
ENSMUSG00000112986	processed_pseudogene	Gm2123	ENSMUST00000221476	processed_pseudogene		13	-1	4170980	2836
ENSMUSG00000113744	lincRNA	Gm47925	ENSMUST00000221474	lincRNA		13	1	4166503	486
ENSMUSG00000061816	protein_coding	Myl1	ENSMUST00000119429	protein_coding	principal1	1	-1	66935354	803
ENSMUSG00000101970	processed_transcript	1810026B05Rik	ENSMUST00000184587	lincRNA		7	-1	73558395	5140
ENSMUSG00000020654	protein_coding	Adcy3	ENSMUST00000134680	processed_transcript		12	1	4159600	484
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000184280	nonsense_mediated_decay		7	1	16816378	913
ENSMUSG00000100960	processed_pseudogene	Gm21156	ENSMUST00000189693	processed_pseudogene		Y	-1	3415289	869
ENSMUSG00000061816	protein_coding	Myl1	ENSMUST00000150542	processed_transcript		1	-1	66935350	567
ENSMUSG00000101970	processed_transcript	1810026B05Rik	ENSMUST00000184554	lincRNA		7	-1	73558244	782
ENSMUSG00000020654	protein_coding	Adcy3	ENSMUST00000150944	retained_intron		12	1	4194821	426
ENSMUSG00000051255	processed_pseudogene	Gm6563	ENSMUST00000056396	processed_pseudogene		19	1	23675848	633
ENSMUSG00000061816	protein_coding	Myl1	ENSMUST00000120415	protein_coding		1	-1	66935333	621
ENSMUSG00000020654	protein_coding	Adcy3	ENSMUST00000127110	retained_intron		12	1	4203268	532
ENSMUSG00000020654	protein_coding	Adcy3	ENSMUST00000020984	protein_coding	principal3	12	1	4134153	4348
ENSMUSG00000101970	processed_transcript	1810026B05Rik	ENSMUST00000190028	lincRNA		7	-1	73558147	590
ENSMUSG00000099970	processed_pseudogene	Rhoay-ps2	ENSMUST00000186362	processed_pseudogene		Y	-1	3747731	581
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000137885	processed_transcript		7	1	16822048	402
ENSMUSG00000061816	protein_coding	Myl1	ENSMUST00000160100	protein_coding		1	-1	66945384	571
ENSMUSG00000101970	processed_transcript	1810026B05Rik	ENSMUST00000189960	retained_intron		7	-1	73546865	2824
ENSMUSG00000099660	processed_pseudogene	Gm2316	ENSMUST00000190613	processed_pseudogene		Y	1	3766452	921
ENSMUSG00000112829	processed_pseudogene	Gm29696	ENSMUST00000219209	processed_pseudogene		12	1	4237712	872
ENSMUSG00000021311	protein_coding	Mtr	ENSMUST00000220473	retained_intron		13	-1	12200490	1784
ENSMUSG00000101970	processed_transcript	1810026B05Rik	ENSMUST00000183916	lincRNA		7	-1	73555920	432
ENSMUSG00000061816	protein_coding	Myl1	ENSMUST00000186346	retained_intron		1	-1	66934698	319
ENSMUSG00000112770	TEC	Gm48210	ENSMUST00000220315	TEC		12	1	4222102	1260
ENSMUSG00000101970	processed_transcript	1810026B05Rik	ENSMUST00000187421	lincRNA		7	-1	73557973	519
ENSMUSG00000021311	protein_coding	Mtr	ENSMUST00000221190	retained_intron		13	-1	12200487	934
ENSMUSG00000061816	protein_coding	Myl1	ENSMUST00000151328	retained_intron		1	-1	66945404	662
ENSMUSG00000101970	processed_transcript	1810026B05Rik	ENSMUST00000184855	lincRNA		7	-1	73558248	409
ENSMUSG00000101970	processed_transcript	1810026B05Rik	ENSMUST00000184655	retained_intron		7	-1	73558386	602
ENSMUSG00000108319	TEC	Gm44552	ENSMUST00000205458	TEC		7	-1	73499248	1247
ENSMUSG00000096199	protein_coding	Ptrhd1	ENSMUST00000179139	protein_coding	principal1	12	1	4234027	3840
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000184708	nonsense_mediated_decay		7	1	16823071	1262
ENSMUSG00000107730	lincRNA	Gm44238	ENSMUST00000203300	lincRNA		6	-1	134930112	353
ENSMUSG00000024924	protein_coding	Vldlr	ENSMUST00000047645	protein_coding		19	1	27217357	3260
ENSMUSG00000092345	protein_coding	Gm20503	ENSMUST00000174664	protein_coding	principal1	4	1	59003210	1294
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000138070	retained_intron		7	1	16824058	435
ENSMUSG00000021311	protein_coding	Mtr	ENSMUST00000221290	nonsense_mediated_decay		13	-1	12258113	2124
ENSMUSG00000037887	protein_coding	Dusp8	ENSMUST00000039926	protein_coding	principal1	7	-1	142095272	4804
ENSMUSG00000097083	antisense	D930019O06Rik	ENSMUST00000181841	antisense		1	1	39650176	3663
ENSMUSG00000037887	protein_coding	Dusp8	ENSMUST00000143661	protein_coding		7	-1	142095843	853
ENSMUSG00000092175	unprocessed_pseudogene	Gm3584	ENSMUST00000173822	unprocessed_pseudogene		7	-1	8649266	2565
ENSMUSG00000070972	protein_coding	Dnajc25	ENSMUST00000148366	protein_coding		4	1	58995062	385
ENSMUSG00000109859	protein_coding	Gm45618	ENSMUST00000209890	protein_coding	principal1	7	-1	142120729	660
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000123247	retained_intron		7	1	16828779	813
ENSMUSG00000109592	unprocessed_pseudogene	Gm45417	ENSMUST00000209533	unprocessed_pseudogene		7	-1	142112413	758
ENSMUSG00000040594	protein_coding	Ranbp17	ENSMUST00000102815	protein_coding	principal1	11	-1	33513746	5001
ENSMUSG00000109958	bidirectional_promoter_lncRNA	Gm32786	ENSMUST00000211351	bidirectional_promoter_lncRNA		7	1	142095758	628
ENSMUSG00000099551	processed_transcript	Gm28072	ENSMUST00000190486	lincRNA		Y	-1	59087386	352
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000127835	processed_transcript		7	1	16830134	389
ENSMUSG00000098318	lincRNA	Lockd	ENSMUST00000183867	lincRNA		6	1	134929092	5662
ENSMUSG00000040594	protein_coding	Ranbp17	ENSMUST00000207401	protein_coding		11	-1	33452514	896
ENSMUSG00000099551	processed_transcript	Gm28072	ENSMUST00000186521	processed_transcript		Y	-1	59087386	537
ENSMUSG00000110091	protein_coding	Gm39115	ENSMUST00000211350	protein_coding	principal1	7	-1	142136034	699
ENSMUSG00000025219	protein_coding	Fgf8	ENSMUST00000026241	protein_coding		19	-1	45742873	1168
ENSMUSG00000096347	unprocessed_pseudogene	Gm21758	ENSMUST00000179336	unprocessed_pseudogene		Y	1	59395263	819
ENSMUSG00000098318	lincRNA	Lockd	ENSMUST00000184991	lincRNA		6	1	134929098	243
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000185011	nonsense_mediated_decay		7	1	16831099	910
ENSMUSG00000098318	lincRNA	Lockd	ENSMUST00000183905	lincRNA		6	1	134929098	474
ENSMUSG00000039967	protein_coding	Zfp292	ENSMUST00000098163	protein_coding	alternative2	4	-1	34882930	9941
ENSMUSG00000101158	protein_coding	Gm20894	ENSMUST00000188864	protein_coding	principal1	Y	-1	28271512	923
ENSMUSG00000070972	protein_coding	Dnajc25	ENSMUST00000152199	protein_coding		4	1	58995114	1141
ENSMUSG00000110061	protein_coding	Gm45337	ENSMUST00000210537	protein_coding	principal1	7	-1	142144607	1267
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000134350	retained_intron		7	1	16832614	653
ENSMUSG00000024924	protein_coding	Vldlr	ENSMUST00000167487	protein_coding	principal3	19	1	27217357	7971
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000123510	retained_intron		7	1	16833165	839
ENSMUSG00000098318	lincRNA	Lockd	ENSMUST00000185152	lincRNA		6	1	134929133	496
ENSMUSG00000109655	protein_coding	Gm29735	ENSMUST00000209599	protein_coding	principal1	7	-1	142157113	660
ENSMUSG00000101531	lincRNA	Gm29672	ENSMUST00000191119	lincRNA		Y	1	59489253	431
ENSMUSG00000101531	lincRNA	Gm29672	ENSMUST00000187118	lincRNA		Y	1	59489253	1038
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000131721	retained_intron		7	1	16836228	4114
ENSMUSG00000039967	protein_coding	Zfp292	ENSMUST00000047950	protein_coding	principal2	4	-1	34882960	9986
ENSMUSG00000098318	lincRNA	Lockd	ENSMUST00000184504	lincRNA		6	1	134929155	544
ENSMUSG00000001583	protein_coding	Tnk1	ENSMUST00000001626	protein_coding	principal2	11	-1	69858730	2778
ENSMUSG00000024924	protein_coding	Vldlr	ENSMUST00000025866	nonsense_mediated_decay		19	1	27217458	3253
ENSMUSG00000040594	protein_coding	Ranbp17	ENSMUST00000129179	nonsense_mediated_decay		11	-1	33513642	3364
ENSMUSG00000050967	protein_coding	Creg2	ENSMUST00000053355	protein_coding	principal1	1	-1	39651474	6091
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000184694	protein_coding		7	1	16837635	921
ENSMUSG00000037321	protein_coding	Tap1	ENSMUST00000170086	protein_coding	principal3	17	1	34187553	2953
ENSMUSG00000001583	protein_coding	Tnk1	ENSMUST00000108628	protein_coding	alternative2	11	-1	69857125	2450
ENSMUSG00000040594	protein_coding	Ranbp17	ENSMUST00000154808	processed_transcript		11	-1	33330015	635
ENSMUSG00000026560	protein_coding	Fmo9	ENSMUST00000027843	protein_coding	principal1	1	-1	166681845	3065
ENSMUSG00000086874	antisense	Gm13175	ENSMUST00000139479	antisense		2	-1	4466670	466
ENSMUSG00000024924	protein_coding	Vldlr	ENSMUST00000165761	protein_coding		19	1	27238774	774
ENSMUSG00000030374	protein_coding	Strn4	ENSMUST00000183680	retained_intron		7	1	16838556	373
ENSMUSG00000099588	unprocessed_pseudogene	Gm29298	ENSMUST00000186704	unprocessed_pseudogene		Y	-1	86689350	696
ENSMUSG00000040594	protein_coding	Ranbp17	ENSMUST00000037522	protein_coding		11	-1	33513630	3950
ENSMUSG00000090727	unprocessed_pseudogene	Gm3956	ENSMUST00000164882	unprocessed_pseudogene		7	-1	8693097	2560
ENSMUSG00000025219	protein_coding	Fgf8	ENSMUST00000111927	protein_coding	alternative1	19	-1	45742858	843
ENSMUSG00000001583	protein_coding	Tnk1	ENSMUST00000156507	protein_coding		11	-1	69855602	560
ENSMUSG00000100468	processed_pseudogene	Tmem167-ps1	ENSMUST00000191236	processed_pseudogene		7	-1	13719906	214
ENSMUSG00000100028	processed_pseudogene	Gm29092	ENSMUST00000190768	processed_pseudogene		Y	-1	86726038	315
ENSMUSG00000040594	protein_coding	Ranbp17	ENSMUST00000147751	protein_coding		11	-1	33513094	675
ENSMUSG00000087355	processed_transcript	Gm13187	ENSMUST00000132211	processed_transcript		2	-1	4301112	500
ENSMUSG00000001583	protein_coding	Tnk1	ENSMUST00000108626	protein_coding		11	-1	69858730	1798
ENSMUSG00000037321	protein_coding	Tap1	ENSMUST00000166287	retained_intron		17	1	34187728	2638
ENSMUSG00000100425	lincRNA	Gm29131	ENSMUST00000189485	lincRNA		Y	1	59517690	1498
ENSMUSG00000026560	protein_coding	Fmo9	ENSMUST00000148677	protein_coding		1	-1	166681835	2462
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239499	nonsense_mediated_decay		11	-1	100619631	1771
ENSMUSG00000021799	protein_coding	Opn4	ENSMUST00000168444	protein_coding	alternative2	14	-1	34599958	2075
ENSMUSG00000070972	protein_coding	Dnajc25	ENSMUST00000095070	protein_coding	principal1	4	1	59003172	4023
ENSMUSG00000025219	protein_coding	Fgf8	ENSMUST00000111924	protein_coding		19	-1	45742684	630
ENSMUSG00000087501	lincRNA	Gm12116	ENSMUST00000131851	lincRNA		11	1	33204055	2770
ENSMUSG00000100425	lincRNA	Gm29131	ENSMUST00000187715	lincRNA		Y	1	59518142	437
ENSMUSG00000092264	unprocessed_pseudogene	Gm3585	ENSMUST00000173438	unprocessed_pseudogene		7	-1	8711442	875
ENSMUSG00000001583	protein_coding	Tnk1	ENSMUST00000125571	protein_coding		11	-1	69858708	1021
ENSMUSG00000069913	processed_pseudogene	Anp32-ps	ENSMUST00000118265	processed_pseudogene		11	-1	33395266	388
ENSMUSG00000025219	protein_coding	Fgf8	ENSMUST00000111925	protein_coding	alternative2	19	-1	45742684	702
ENSMUSG00000101005	unprocessed_pseudogene	Gm20871	ENSMUST00000191322	unprocessed_pseudogene		Y	-1	59632768	931
ENSMUSG00000083471	processed_pseudogene	Gm12118	ENSMUST00000119766	processed_pseudogene		11	1	33438449	532
ENSMUSG00000103042	processed_pseudogene	Gm2719	ENSMUST00000191929	processed_pseudogene		6	1	41253328	444
ENSMUSG00000093800	processed_pseudogene	Gm20796	ENSMUST00000180355	processed_pseudogene		8	-1	20888200	5838
ENSMUSG00000087355	processed_transcript	Gm13187	ENSMUST00000133873	processed_transcript		2	-1	4301167	1321
ENSMUSG00000021799	protein_coding	Opn4	ENSMUST00000226806	processed_transcript		14	-1	34591839	795
ENSMUSG00000067925	protein_coding	Rtl8a	ENSMUST00000088779	protein_coding	principal1	X	-1	53643682	1195
ENSMUSG00000087355	processed_transcript	Gm13187	ENSMUST00000156609	processed_transcript		2	-1	4301167	346
ENSMUSG00000104254	TR_V_pseudogene	Trbv27	ENSMUST00000193711	TR_V_pseudogene		6	1	41258303	277
ENSMUSG00000104284	sense_intronic	Gm10862	ENSMUST00000193956	sense_intronic		2	1	4091140	3350
ENSMUSG00000085876	processed_transcript	Gm12409	ENSMUST00000147231	processed_transcript		4	-1	45764223	646
ENSMUSG00000086018	antisense	Gm13179	ENSMUST00000151994	antisense		2	-1	4587287	978
ENSMUSG00000104326	TR_V_pseudogene	Trbv28	ENSMUST00000192804	TR_V_pseudogene		6	1	41266887	264
ENSMUSG00000021799	protein_coding	Opn4	ENSMUST00000022331	protein_coding	principal3	14	-1	34600142	2156
ENSMUSG00000086018	antisense	Gm13179	ENSMUST00000137801	antisense		2	-1	4587287	674
ENSMUSG00000067924	protein_coding	Rtl8b	ENSMUST00000088778	protein_coding	principal1	X	-1	53670408	1232
ENSMUSG00000102517	sense_intronic	Gm38085	ENSMUST00000195785	sense_intronic		2	1	4103877	3062
ENSMUSG00000070972	protein_coding	Dnajc25	ENSMUST00000150309	nonsense_mediated_decay		4	1	59003182	2485
ENSMUSG00000117710	antisense	Gm10817	ENSMUST00000236968	antisense		19	1	5118038	1292
ENSMUSG00000074454	protein_coding	Defb33	ENSMUST00000098908	protein_coding	principal1	8	1	20892669	424
ENSMUSG00000087035	protein_coding	Tmem74bos	ENSMUST00000149319	protein_coding	principal1	2	-1	151686339	2090
ENSMUSG00000084859	antisense	1700080N15Rik	ENSMUST00000141488	antisense		2	-1	4141141	416
ENSMUSG00000087035	protein_coding	Tmem74bos	ENSMUST00000137422	processed_transcript		2	-1	151686063	390
ENSMUSG00000029307	protein_coding	Dmp1	ENSMUST00000066708	protein_coding	principal1	5	1	104202613	2764
ENSMUSG00000084859	antisense	1700080N15Rik	ENSMUST00000155091	antisense		2	-1	4141141	434
ENSMUSG00000037321	protein_coding	Tap1	ENSMUST00000166853	retained_intron		17	1	34187734	3911
ENSMUSG00000083685	processed_pseudogene	Gm12412	ENSMUST00000121867	processed_pseudogene		4	-1	45777209	328
ENSMUSG00000081777	processed_pseudogene	Gm14159	ENSMUST00000119832	processed_pseudogene		2	-1	151699926	451
ENSMUSG00000084859	antisense	1700080N15Rik	ENSMUST00000154360	antisense		2	-1	4141139	1316
ENSMUSG00000102136	sense_intronic	Gm37107	ENSMUST00000195326	sense_intronic		2	1	4178110	2552
ENSMUSG00000076480	TR_V_gene	Trbv29	ENSMUST00000103281	TR_V_gene	principal1	6	1	41271394	353
ENSMUSG00000102816	sense_intronic	Gm37814	ENSMUST00000195820	sense_intronic		2	1	4138984	3644
ENSMUSG00000071763	unprocessed_pseudogene	4933416I08Rik	ENSMUST00000125315	unprocessed_pseudogene		X	1	53686637	703
ENSMUSG00000102494	sense_intronic	Gm36988	ENSMUST00000194090	sense_intronic		2	1	4316479	2408
ENSMUSG00000081889	processed_pseudogene	Gm13188	ENSMUST00000121150	processed_pseudogene		2	-1	4082418	564
ENSMUSG00000070972	protein_coding	Dnajc25	ENSMUST00000153467	nonsense_mediated_decay		4	1	59003193	2393
ENSMUSG00000102357	sense_intronic	Gm38348	ENSMUST00000191718	sense_intronic		2	1	4217081	2273
ENSMUSG00000118336	TEC	Gm50172	ENSMUST00000235825	TEC		18	1	63265090	2438
ENSMUSG00000085629	antisense	Gm11697	ENSMUST00000149226	antisense		11	1	109936316	525
ENSMUSG00000082976	protein_coding	Gm15056	ENSMUST00000122025	protein_coding	alternative2	8	-1	20902627	549
ENSMUSG00000086458	processed_pseudogene	Gm2639	ENSMUST00000156881	processed_pseudogene		2	-1	4052559	1297
ENSMUSG00000082976	protein_coding	Gm15056	ENSMUST00000167686	protein_coding	principal2	8	-1	20901973	314
ENSMUSG00000086921	lincRNA	Gm13189	ENSMUST00000138462	lincRNA		2	1	4137774	252
ENSMUSG00000105355	antisense	Gm40117	ENSMUST00000198827	antisense		3	1	104994032	369
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000115212	protein_coding		6	1	30047988	3584
ENSMUSG00000076481	TR_V_gene	Trbv30	ENSMUST00000191646	TR_V_gene	principal5	6	1	41281376	335
ENSMUSG00000076481	TR_V_gene	Trbv30	ENSMUST00000103282	TR_V_gene	alternative2	6	1	41281376	332
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000138735	processed_transcript		2	1	4017717	508
ENSMUSG00000016150	protein_coding	Tenm1	ENSMUST00000115059	protein_coding	principal1	X	-1	43167838	12879
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000137809	retained_intron		2	1	4017734	3740
ENSMUSG00000036880	protein_coding	Acaa2	ENSMUST00000041053	protein_coding	principal1	18	1	74779197	1516
ENSMUSG00000035529	protein_coding	Prdm4	ENSMUST00000220032	protein_coding	principal2	10	-1	85916986	3962
ENSMUSG00000025428	protein_coding	Atp5a1	ENSMUST00000026495	protein_coding	principal1	18	1	77773729	2471
ENSMUSG00000071165	protein_coding	Gm6040	ENSMUST00000095430	protein_coding	principal1	8	-1	20922071	857
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000151346	protein_coding		4	-1	123544831	17175
ENSMUSG00000016150	protein_coding	Tenm1	ENSMUST00000125231	processed_transcript		X	-1	43429003	1143
ENSMUSG00000036880	protein_coding	Acaa2	ENSMUST00000237306	protein_coding		18	1	74793383	504
ENSMUSG00000079679	protein_coding	Vwde	ENSMUST00000203074	protein_coding	principal1	6	-1	13224965	5626
ENSMUSG00000016150	protein_coding	Tenm1	ENSMUST00000154433	retained_intron		X	-1	43429003	3443
ENSMUSG00000079679	protein_coding	Vwde	ENSMUST00000204800	retained_intron		6	-1	13177062	659
ENSMUSG00000025428	protein_coding	Atp5a1	ENSMUST00000114748	protein_coding		18	1	77773956	2674
ENSMUSG00000037321	protein_coding	Tap1	ENSMUST00000041633	protein_coding	alternative2	17	1	34187802	2614
ENSMUSG00000029656	protein_coding	C8b	ENSMUST00000031663	protein_coding	principal3	4	1	104766317	2239
ENSMUSG00000016150	protein_coding	Tenm1	ENSMUST00000115058	protein_coding		X	-1	43167817	12837
ENSMUSG00000025428	protein_coding	Atp5a1	ENSMUST00000135678	nonsense_mediated_decay		18	1	77773992	774
ENSMUSG00000035529	protein_coding	Prdm4	ENSMUST00000219370	nonsense_mediated_decay		10	-1	85916656	3772
ENSMUSG00000079679	protein_coding	Vwde	ENSMUST00000054530	protein_coding		6	-1	13224965	3979
ENSMUSG00000038607	protein_coding	Gng10	ENSMUST00000041160	protein_coding	principal1	4	1	59035088	1192
ENSMUSG00000029656	protein_coding	C8b	ENSMUST00000065072	protein_coding	alternative2	4	1	104766395	1586
ENSMUSG00000037321	protein_coding	Tap1	ENSMUST00000168351	retained_intron		17	1	34189891	3081
ENSMUSG00000025428	protein_coding	Atp5a1	ENSMUST00000128073	retained_intron		18	1	77778955	765
ENSMUSG00000038607	protein_coding	Gng10	ENSMUST00000126507	processed_transcript		4	1	59035772	1083
ENSMUSG00000029656	protein_coding	C8b	ENSMUST00000123892	processed_transcript		4	1	104799208	1061
ENSMUSG00000035529	protein_coding	Prdm4	ENSMUST00000037646	protein_coding	alternative2	10	-1	85916926	3877
ENSMUSG00000037321	protein_coding	Tap1	ENSMUST00000171148	protein_coding		17	1	34190752	587
ENSMUSG00000079679	protein_coding	Vwde	ENSMUST00000204339	retained_intron		6	-1	13208543	642
ENSMUSG00000016150	protein_coding	Tenm1	ENSMUST00000016294	protein_coding	principal1	X	-1	43274786	8365
ENSMUSG00000025428	protein_coding	Atp5a1	ENSMUST00000146869	retained_intron		18	1	77779832	816
ENSMUSG00000035529	protein_coding	Prdm4	ENSMUST00000218743	retained_intron		10	-1	85901915	729
ENSMUSG00000037321	protein_coding	Tap1	ENSMUST00000166582	retained_intron		17	1	34193054	757
ENSMUSG00000035529	protein_coding	Prdm4	ENSMUST00000219112	retained_intron		10	-1	85907498	592
ENSMUSG00000051950	protein_coding	B3glct	ENSMUST00000100404	protein_coding	principal1	5	1	149678230	4570
ENSMUSG00000099537	lincRNA	Gm28938	ENSMUST00000187029	lincRNA		Y	-1	28333513	1495
ENSMUSG00000035529	protein_coding	Prdm4	ENSMUST00000218289	retained_intron		10	-1	85917142	1918
ENSMUSG00000035529	protein_coding	Prdm4	ENSMUST00000218969	protein_coding		10	-1	85917138	831
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000123194	protein_coding		6	1	30047991	792
ENSMUSG00000051950	protein_coding	B3glct	ENSMUST00000202302	processed_transcript		5	1	149739532	509
ENSMUSG00000099537	lincRNA	Gm28938	ENSMUST00000191129	lincRNA		Y	-1	28333061	614
ENSMUSG00000099537	lincRNA	Gm28938	ENSMUST00000191487	lincRNA		Y	-1	28333061	430
ENSMUSG00000005696	protein_coding	Sh2d1a	ENSMUST00000129855	processed_transcript		X	1	42502453	2269
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000115211	protein_coding		6	1	30048002	3295
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000238731	protein_coding		4	-1	123564694	17268
ENSMUSG00000118525	processed_pseudogene	AC121573.1	ENSMUST00000238854	processed_pseudogene		6	1	13263745	844
ENSMUSG00000075141	protein_coding	Olfr1160	ENSMUST00000215457	protein_coding	alternative2	2	-1	88008268	6042
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000238555	protein_coding		4	-1	123573060	17480
ENSMUSG00000101669	unprocessed_pseudogene	Gm28937	ENSMUST00000185413	unprocessed_pseudogene		Y	1	28377377	695
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000146988	retained_intron		6	1	30048029	4042
ENSMUSG00000075141	protein_coding	Olfr1160	ENSMUST00000099839	protein_coding	principal2	2	-1	88006776	960
ENSMUSG00000051950	protein_coding	B3glct	ENSMUST00000201088	retained_intron		5	1	149753942	1437
ENSMUSG00000054106	protein_coding	Try4	ENSMUST00000031913	protein_coding	principal1	6	1	41302269	801
ENSMUSG00000090471	protein_coding	Gm4553	ENSMUST00000210925	protein_coding	principal5	7	-1	142165739	1044
ENSMUSG00000090471	protein_coding	Gm4553	ENSMUST00000168049	protein_coding	alternative2	7	-1	142165737	714
ENSMUSG00000092416	protein_coding	Zfp141	ENSMUST00000174407	protein_coding	principal1	7	-1	42505726	4069
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000115206	protein_coding	principal1	6	1	30048031	1879
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000082108	protein_coding		4	-1	123684360	17331
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000133928	protein_coding		6	1	30048042	503
ENSMUSG00000092416	protein_coding	Zfp141	ENSMUST00000174489	retained_intron		7	-1	42477363	533
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000115208	protein_coding		6	1	30048045	2492
ENSMUSG00000101894	lincRNA	1700016P04Rik	ENSMUST00000186770	lincRNA		6	1	13413337	429
ENSMUSG00000051758	lincRNA	4930544M13Rik	ENSMUST00000063230	lincRNA		13	1	114607237	999
ENSMUSG00000092416	protein_coding	Zfp141	ENSMUST00000173489	protein_coding		7	-1	42505740	637
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000115209	protein_coding		6	1	30048067	2406
ENSMUSG00000107500	processed_pseudogene	Gm2796	ENSMUST00000204007	processed_pseudogene		6	-1	13461957	496
ENSMUSG00000019461	protein_coding	Plscr3	ENSMUST00000108632	protein_coding	principal1	11	1	69846376	1835
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000115200	protein_coding		6	1	30048072	2491
ENSMUSG00000055707	protein_coding	Klhl26	ENSMUST00000209415	protein_coding		8	-1	70476950	2919
ENSMUSG00000099862	unprocessed_pseudogene	Gm28936	ENSMUST00000187153	unprocessed_pseudogene		Y	1	28414211	615
ENSMUSG00000092416	protein_coding	Zfp141	ENSMUST00000173439	retained_intron		7	-1	42505725	1275
ENSMUSG00000043257	protein_coding	Pigv	ENSMUST00000062118	protein_coding	principal1	4	-1	133672647	3979
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000115204	protein_coding		6	1	30048072	2047
ENSMUSG00000055707	protein_coding	Klhl26	ENSMUST00000210250	protein_coding		8	-1	70476949	2974
ENSMUSG00000092505	processed_pseudogene	Gm19246	ENSMUST00000173599	processed_pseudogene		7	1	42488801	255
ENSMUSG00000101908	unprocessed_pseudogene	Gm21642	ENSMUST00000187826	unprocessed_pseudogene		Y	1	28443743	696
ENSMUSG00000117754	processed_pseudogene	Rpl37a-ps2	ENSMUST00000235192	processed_pseudogene		18	-1	74910387	266
ENSMUSG00000019461	protein_coding	Plscr3	ENSMUST00000152566	protein_coding		11	1	69846617	908
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000148990	protein_coding		6	1	30048151	486
ENSMUSG00000051758	lincRNA	4930544M13Rik	ENSMUST00000181553	lincRNA		13	1	114607237	1403
ENSMUSG00000117767	processed_pseudogene	Gm18786	ENSMUST00000236784	processed_pseudogene		18	1	74936280	1236
ENSMUSG00000035561	protein_coding	Aldh1b1	ENSMUST00000044384	protein_coding	principal1	4	1	45799022	2298
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000115199	protein_coding		6	1	30076321	2296
ENSMUSG00000041840	protein_coding	Haus1	ENSMUST00000236234	protein_coding		18	-1	77773886	1226
ENSMUSG00000019461	protein_coding	Plscr3	ENSMUST00000019605	protein_coding	principal1	11	1	69846676	1927
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000084589	protein_coding	principal2	7	-1	126585817	3203
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000106224	protein_coding	alternative2	4	-1	123684360	23402
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000130096	retained_intron		6	1	30089934	943
ENSMUSG00000055707	protein_coding	Klhl26	ENSMUST00000066597	protein_coding	principal1	8	-1	70476905	2991
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000133837	processed_transcript		6	1	30097783	676
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000140596	protein_coding		4	-1	123390538	1109
ENSMUSG00000019461	protein_coding	Plscr3	ENSMUST00000108633	protein_coding	principal1	11	1	69846617	2785
ENSMUSG00000043257	protein_coding	Pigv	ENSMUST00000067902	protein_coding		4	-1	133672647	990
ENSMUSG00000035561	protein_coding	Aldh1b1	ENSMUST00000172750	protein_coding		4	1	45799121	445
ENSMUSG00000045150	protein_coding	Olfr1161	ENSMUST00000217006	protein_coding	principal1	2	1	88024060	3647
ENSMUSG00000049357	protein_coding	Brd8dc	ENSMUST00000056932	protein_coding	principal1	18	-1	34597468	2362
ENSMUSG00000045150	protein_coding	Olfr1161	ENSMUST00000214438	protein_coding	principal1	2	1	88022774	3675
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000125447	protein_coding		4	-1	123412228	5597
ENSMUSG00000041840	protein_coding	Haus1	ENSMUST00000048192	protein_coding	principal1	18	-1	77767780	1003
ENSMUSG00000098223	processed_pseudogene	Gm4891	ENSMUST00000182279	processed_pseudogene		8	1	80933677	912
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000132866	protein_coding		6	1	30116115	1253
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000147228	protein_coding		4	-1	123527648	6281
ENSMUSG00000049357	protein_coding	Brd8dc	ENSMUST00000129566	nonsense_mediated_decay		18	-1	34597345	2212
ENSMUSG00000098001	lincRNA	Gm27048	ENSMUST00000182891	lincRNA		8	-1	80938667	4627
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000032962	protein_coding	principal2	7	-1	126583247	2386
ENSMUSG00000045150	protein_coding	Olfr1161	ENSMUST00000054845	protein_coding	principal1	2	1	88024702	1012
ENSMUSG00000043257	protein_coding	Pigv	ENSMUST00000151837	processed_transcript		4	-1	133672647	653
ENSMUSG00000041840	protein_coding	Haus1	ENSMUST00000236575	retained_intron		18	-1	77767786	6882
ENSMUSG00000079120	protein_coding	AY761185	ENSMUST00000110758	protein_coding	principal1	8	-1	20944710	448
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000147030	protein_coding		4	-1	123664752	5706
ENSMUSG00000118223	lincRNA	1810035K13Rik	ENSMUST00000237665	lincRNA		19	1	58695521	348
ENSMUSG00000094191	processed_pseudogene	Rpl31-ps14	ENSMUST00000143596	processed_pseudogene		1	-1	66948940	378
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000106213	processed_transcript		4	-1	123479197	5647
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000098036	protein_coding	alternative2	7	-1	126583190	1571
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000170535	protein_coding		6	1	30089895	1527
ENSMUSG00000055707	protein_coding	Klhl26	ENSMUST00000166976	protein_coding		8	-1	70476968	2734
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000238866	protein_coding		4	-1	123613743	1083
ENSMUSG00000062127	protein_coding	Cttnbp2nl	ENSMUST00000077548	protein_coding	principal1	3	-1	105053146	4946
ENSMUSG00000005696	protein_coding	Sh2d1a	ENSMUST00000189753	protein_coding	principal1	X	1	42502497	1223
ENSMUSG00000043484	processed_pseudogene	Gm5867	ENSMUST00000063197	processed_pseudogene		5	1	69461152	592
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000167972	protein_coding		6	1	30089895	1541
ENSMUSG00000106986	TEC	Gm42887	ENSMUST00000202469	TEC		5	-1	69504960	1119
ENSMUSG00000055707	protein_coding	Klhl26	ENSMUST00000209567	protein_coding		8	-1	70475898	2615
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000004761	protein_coding		6	1	30089895	1589
ENSMUSG00000082212	processed_pseudogene	Gm15826	ENSMUST00000121328	processed_pseudogene		1	1	66951829	1384
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000138285	processed_transcript		7	-1	126575087	527
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000069831	protein_coding		6	1	30089895	1625
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000139766	processed_transcript		7	-1	126572728	537
ENSMUSG00000062127	protein_coding	Cttnbp2nl	ENSMUST00000098763	protein_coding	principal1	3	-1	105052951	4834
ENSMUSG00000058440	protein_coding	Nrf1	ENSMUST00000069808	protein_coding	principal1	6	1	30089889	1658
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000124177	retained_intron		7	-1	126577863	812
ENSMUSG00000008438	protein_coding	Adam21	ENSMUST00000008582	protein_coding	principal1	12	-1	81568474	2911
ENSMUSG00000005696	protein_coding	Sh2d1a	ENSMUST00000005839	protein_coding	principal1	X	1	42502562	883
ENSMUSG00000066798	protein_coding	Zbtb6	ENSMUST00000112932	protein_coding	principal1	2	-1	37443171	5077
ENSMUSG00000062127	protein_coding	Cttnbp2nl	ENSMUST00000197437	protein_coding		3	-1	105052954	681
ENSMUSG00000090698	protein_coding	Apold1	ENSMUST00000167323	protein_coding	principal1	6	1	134981718	3567
ENSMUSG00000005696	protein_coding	Sh2d1a	ENSMUST00000115070	protein_coding		X	1	42502654	782
ENSMUSG00000062127	protein_coding	Cttnbp2nl	ENSMUST00000199002	retained_intron		3	-1	105052925	3767
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000146000	retained_intron		4	-1	123564694	1378
ENSMUSG00000066798	protein_coding	Zbtb6	ENSMUST00000053098	protein_coding	principal1	2	-1	37430919	4535
ENSMUSG00000005696	protein_coding	Sh2d1a	ENSMUST00000153948	protein_coding		X	1	42502760	400
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000097897	protein_coding	principal2	4	-1	123684360	23495
ENSMUSG00000005696	protein_coding	Sh2d1a	ENSMUST00000128393	processed_transcript		X	1	42514313	625
ENSMUSG00000005696	protein_coding	Sh2d1a	ENSMUST00000101619	retained_intron		X	1	42526585	2746
ENSMUSG00000019647	protein_coding	Sema6a	ENSMUST00000019791	protein_coding	principal3	18	-1	47368830	6856
ENSMUSG00000044364	protein_coding	Tmem74b	ENSMUST00000060196	protein_coding	principal1	2	1	151702008	1435
ENSMUSG00000044538	processed_pseudogene	Obox3-ps8	ENSMUST00000177182	processed_pseudogene		17	-1	36453253	960
ENSMUSG00000096727	protein_coding	Psmb9	ENSMUST00000174576	protein_coding	principal1	17	-1	34187764	1352
ENSMUSG00000020577	protein_coding	Tspan13	ENSMUST00000020896	protein_coding	principal1	12	-1	36042489	1932
ENSMUSG00000104930	processed_pseudogene	Gm43243	ENSMUST00000199964	processed_pseudogene		3	1	102068050	278
ENSMUSG00000091189	unprocessed_pseudogene	Ear-ps3	ENSMUST00000168308	unprocessed_pseudogene		14	1	51753505	445
ENSMUSG00000096727	protein_coding	Psmb9	ENSMUST00000178857	retained_intron		17	-1	34183549	783
ENSMUSG00000050714	protein_coding	Zbtb26	ENSMUST00000067043	protein_coding	principal1	2	-1	37443121	5267
ENSMUSG00000029158	protein_coding	Yipf7	ENSMUST00000031045	protein_coding	principal1	5	-1	69542648	1219
ENSMUSG00000044364	protein_coding	Tmem74b	ENSMUST00000109872	protein_coding	principal1	2	1	151702311	1399
ENSMUSG00000028821	protein_coding	Syf2	ENSMUST00000030622	protein_coding	principal1	4	1	134930898	1369
ENSMUSG00000020577	protein_coding	Tspan13	ENSMUST00000220641	nonsense_mediated_decay		12	-1	36042500	693
ENSMUSG00000096727	protein_coding	Psmb9	ENSMUST00000114230	retained_intron		17	-1	34187353	2884
ENSMUSG00000050714	protein_coding	Zbtb26	ENSMUST00000102789	protein_coding		2	-1	37443120	2047
ENSMUSG00000085841	processed_pseudogene	Gm4954	ENSMUST00000135069	processed_pseudogene		1	1	166762145	1601
ENSMUSG00000029158	protein_coding	Yipf7	ENSMUST00000202423	protein_coding		5	-1	69542589	398
ENSMUSG00000050714	protein_coding	Zbtb26	ENSMUST00000203522	processed_transcript		2	-1	37443135	4657
ENSMUSG00000103073	processed_pseudogene	Gm37904	ENSMUST00000195591	processed_pseudogene		1	-1	166798839	312
ENSMUSG00000020577	protein_coding	Tspan13	ENSMUST00000222584	protein_coding		12	-1	36039935	803
ENSMUSG00000113249	processed_pseudogene	Gm33312	ENSMUST00000222443	processed_pseudogene		12	1	85662442	332
ENSMUSG00000086925	processed_pseudogene	Gm6286	ENSMUST00000145247	processed_pseudogene		1	-1	166946358	762
ENSMUSG00000103797	processed_pseudogene	Gm18964	ENSMUST00000193013	processed_pseudogene		6	-1	41306765	563
ENSMUSG00000107291	TEC	3110031N09Rik	ENSMUST00000201115	TEC		5	-1	69556882	326
ENSMUSG00000096727	protein_coding	Psmb9	ENSMUST00000171321	protein_coding		17	-1	34183731	433
ENSMUSG00000096727	protein_coding	Psmb9	ENSMUST00000237228	nonsense_mediated_decay		17	-1	34187365	1025
ENSMUSG00000020061	protein_coding	Mybpc1	ENSMUST00000121629	protein_coding	principal3	10	-1	88605152	3922
ENSMUSG00000085998	transcribed_unprocessed_pseudogene	AW822252	ENSMUST00000192662	TEC		X	-1	53697206	1352
ENSMUSG00000028821	protein_coding	Syf2	ENSMUST00000156334	retained_intron		4	1	134930902	816
ENSMUSG00000096727	protein_coding	Psmb9	ENSMUST00000179593	retained_intron		17	-1	34187338	665
ENSMUSG00000029797	protein_coding	Sspo	ENSMUST00000212740	protein_coding	alternative2	6	1	48448229	15408
ENSMUSG00000108730	unprocessed_pseudogene	Gm45135	ENSMUST00000206787	unprocessed_pseudogene		7	-1	43994130	1184
ENSMUSG00000096727	protein_coding	Psmb9	ENSMUST00000173831	protein_coding		17	-1	34187219	529
ENSMUSG00000048231	protein_coding	H2-M10.4	ENSMUST00000057502	protein_coding	principal1	17	-1	36462334	1410
ENSMUSG00000020061	protein_coding	Mybpc1	ENSMUST00000124144	retained_intron		10	-1	88523278	600
ENSMUSG00000085998	transcribed_unprocessed_pseudogene	AW822252	ENSMUST00000187290	processed_transcript		X	-1	53710481	416
ENSMUSG00000028821	protein_coding	Syf2	ENSMUST00000144037	retained_intron		4	1	134931010	869
ENSMUSG00000040987	protein_coding	Mill2	ENSMUST00000228493	protein_coding	principal4	7	1	18839966	2043
ENSMUSG00000101088	transcribed_unprocessed_pseudogene	1810018F18Rik	ENSMUST00000188253	processed_transcript		19	1	58698917	277
ENSMUSG00000040987	protein_coding	Mill2	ENSMUST00000227379	protein_coding	alternative2	7	1	18839966	1998
ENSMUSG00000108602	unprocessed_pseudogene	Klk1b10-ps	ENSMUST00000205895	unprocessed_pseudogene		7	1	43987793	783
ENSMUSG00000020061	protein_coding	Mybpc1	ENSMUST00000119185	protein_coding	alternative2	10	-1	88605025	3752
ENSMUSG00000045566	protein_coding	Sprr4	ENSMUST00000062129	protein_coding	principal1	3	-1	92500493	231
ENSMUSG00000086636	antisense	Gm12949	ENSMUST00000143382	antisense		11	1	62522741	362
ENSMUSG00000048231	protein_coding	H2-M10.4	ENSMUST00000169950	protein_coding	principal1	17	-1	36462329	996
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000106220	protein_coding		4	-1	123527459	17608
ENSMUSG00000020061	protein_coding	Mybpc1	ENSMUST00000238199	protein_coding	alternative2	10	-1	88605025	3650
ENSMUSG00000020061	protein_coding	Mybpc1	ENSMUST00000153964	protein_coding		10	-1	88536482	1392
ENSMUSG00000101088	transcribed_unprocessed_pseudogene	1810018F18Rik	ENSMUST00000189546	processed_transcript		19	1	58698917	1447
ENSMUSG00000075140	protein_coding	Olfr73	ENSMUST00000129056	protein_coding	principal1	2	-1	88037699	3048
ENSMUSG00000085998	transcribed_unprocessed_pseudogene	AW822252	ENSMUST00000148826	processed_transcript		X	-1	53716578	1081
ENSMUSG00000075140	protein_coding	Olfr73	ENSMUST00000099838	protein_coding	principal1	2	-1	88035137	942
ENSMUSG00000040987	protein_coding	Mill2	ENSMUST00000206487	nonsense_mediated_decay		7	1	18839989	4453
ENSMUSG00000020061	protein_coding	Mybpc1	ENSMUST00000148205	retained_intron		10	-1	88536534	805
ENSMUSG00000101088	transcribed_unprocessed_pseudogene	1810018F18Rik	ENSMUST00000189764	transcribed_unprocessed_pseudogene		19	1	58699082	1325
ENSMUSG00000071815	protein_coding	Fthl17e	ENSMUST00000096509	protein_coding	principal1	X	1	9033493	841
ENSMUSG00000020061	protein_coding	Mybpc1	ENSMUST00000156573	protein_coding		10	-1	88553422	1876
ENSMUSG00000009734	protein_coding	Pou6f2	ENSMUST00000139064	protein_coding		13	-1	18382041	5977
ENSMUSG00000086884	lincRNA	Gm16225	ENSMUST00000146152	lincRNA		4	-1	135120447	276
ENSMUSG00000085998	transcribed_unprocessed_pseudogene	AW822252	ENSMUST00000138201	processed_transcript		X	-1	53716562	581
ENSMUSG00000085998	transcribed_unprocessed_pseudogene	AW822252	ENSMUST00000188573	processed_transcript		X	-1	53716772	2263
ENSMUSG00000009734	protein_coding	Pou6f2	ENSMUST00000175703	protein_coding		13	-1	18382041	1874
ENSMUSG00000085998	transcribed_unprocessed_pseudogene	AW822252	ENSMUST00000208904	transcribed_unprocessed_pseudogene		X	-1	53716773	237
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000109142	protein_coding	principal3	11	1	50376990	2427
ENSMUSG00000040987	protein_coding	Mill2	ENSMUST00000207014	processed_transcript		7	1	18840001	463
ENSMUSG00000109641	lincRNA	Gm45556	ENSMUST00000210689	lincRNA		7	1	104867993	345
ENSMUSG00000097823	lincRNA	Gm16701	ENSMUST00000181309	lincRNA		1	-1	167000841	1627
ENSMUSG00000102308	protein_coding	2310046K23Rik	ENSMUST00000193521	protein_coding	principal1	3	-1	92534511	677
ENSMUSG00000075139	protein_coding	Olfr1162	ENSMUST00000183862	protein_coding	principal1	2	-1	88051129	4800
ENSMUSG00000009734	protein_coding	Pou6f2	ENSMUST00000176795	nonsense_mediated_decay		13	-1	18172535	1042
ENSMUSG00000040987	protein_coding	Mill2	ENSMUST00000072386	protein_coding	principal4	7	1	18839966	1121
ENSMUSG00000086518	processed_pseudogene	Gm14503	ENSMUST00000130337	processed_pseudogene		X	-1	9038320	1164
ENSMUSG00000075139	protein_coding	Olfr1162	ENSMUST00000099837	protein_coding	principal1	2	-1	88050622	945
ENSMUSG00000040987	protein_coding	Mill2	ENSMUST00000072415	protein_coding	alternative2	7	1	18839966	1075
ENSMUSG00000102548	lincRNA	Gm16701	ENSMUST00000180995	lincRNA		1	-1	166999728	934
ENSMUSG00000044485	protein_coding	Klk1b11	ENSMUST00000007156	protein_coding	principal1	7	1	43995877	863
ENSMUSG00000009734	protein_coding	Pou6f2	ENSMUST00000176898	processed_transcript		13	-1	18186486	878
ENSMUSG00000085380	lincRNA	E130120K24Rik	ENSMUST00000129910	lincRNA		14	1	46556303	556
ENSMUSG00000028649	protein_coding	Macf1	ENSMUST00000084301	protein_coding	alternative2	4	-1	123684360	23398
ENSMUSG00000009734	protein_coding	Pou6f2	ENSMUST00000175768	processed_transcript		13	-1	18382041	1289
ENSMUSG00000019647	protein_coding	Sema6a	ENSMUST00000076043	protein_coding	alternative1	18	-1	47368446	4123
ENSMUSG00000009734	protein_coding	Pou6f2	ENSMUST00000223058	processed_transcript		13	-1	18397686	692
ENSMUSG00000009734	protein_coding	Pou6f2	ENSMUST00000222900	retained_intron		13	-1	18382039	379
ENSMUSG00000085123	lincRNA	Rubie	ENSMUST00000227803	lincRNA		14	-1	46587983	2430
ENSMUSG00000085123	lincRNA	Rubie	ENSMUST00000226162	lincRNA		14	-1	46598425	1598
ENSMUSG00000009734	protein_coding	Pou6f2	ENSMUST00000184299	protein_coding	principal1	13	-1	18172540	793
ENSMUSG00000019647	protein_coding	Sema6a	ENSMUST00000135790	protein_coding	alternative1	18	-1	47368448	4339
ENSMUSG00000085123	lincRNA	Rubie	ENSMUST00000151828	lincRNA		14	-1	46575847	1137
ENSMUSG00000115781	processed_transcript	Gm49319	ENSMUST00000228533	processed_transcript		14	-1	46611010	1172
ENSMUSG00000115781	processed_transcript	Gm49319	ENSMUST00000228663	processed_transcript		14	-1	46637408	2497
ENSMUSG00000115781	processed_transcript	Gm49319	ENSMUST00000228523	processed_transcript		14	-1	46637408	2657
ENSMUSG00000073877	protein_coding	Gm13306	ENSMUST00000131704	processed_transcript		4	1	42153436	336
ENSMUSG00000115828	processed_pseudogene	Gm18761	ENSMUST00000226841	processed_pseudogene		14	1	46607552	1079
ENSMUSG00000073877	protein_coding	Gm13306	ENSMUST00000154600	processed_transcript		4	1	42153484	347
ENSMUSG00000055555	protein_coding	Ct55	ENSMUST00000069209	protein_coding	principal1	X	1	53724826	1427
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000153790	retained_intron		7	-1	126584307	1821
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000079754	protein_coding	principal3	19	-1	37207462	5899
ENSMUSG00000019647	protein_coding	Sema6a	ENSMUST00000141224	retained_intron		18	-1	47368868	3225
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000128225	processed_transcript		7	-1	126583226	977
ENSMUSG00000019647	protein_coding	Sema6a	ENSMUST00000151382	retained_intron		18	-1	47368870	3328
ENSMUSG00000115665	lincRNA	4933425B07Rik	ENSMUST00000226569	lincRNA		14	-1	46637423	1926
ENSMUSG00000115665	lincRNA	4933425B07Rik	ENSMUST00000228452	lincRNA		14	-1	46634593	386
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000124158	protein_coding		19	-1	37174095	4811
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000150917	nonsense_mediated_decay		7	-1	126583362	771
ENSMUSG00000073877	protein_coding	Gm13306	ENSMUST00000108018	protein_coding	alternative2	4	1	42154040	542
ENSMUSG00000033769	protein_coding	Exoc6b	ENSMUST00000160197	protein_coding	principal1	6	-1	85069513	5439
ENSMUSG00000019647	protein_coding	Sema6a	ENSMUST00000156422	protein_coding	principal3	18	-1	47333348	3291
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000154376	protein_coding	principal3	19	-1	37176063	5671
ENSMUSG00000024862	protein_coding	Klc2	ENSMUST00000113728	protein_coding		19	-1	5118297	2838
ENSMUSG00000019647	protein_coding	Sema6a	ENSMUST00000126684	protein_coding		18	-1	47333326	740
ENSMUSG00000032897	protein_coding	Nfyc	ENSMUST00000043429	protein_coding	principal1	4	-1	120825706	1932
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000120083	protein_coding	principal1	4	1	116137237	2953
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000136286	protein_coding	alternative2	19	-1	37207462	5260
ENSMUSG00000014158	protein_coding	Trpv4	ENSMUST00000071968	protein_coding	principal1	5	-1	114658421	3228
ENSMUSG00000032897	protein_coding	Nfyc	ENSMUST00000118902	protein_coding	principal1	4	-1	120831572	1887
ENSMUSG00000025279	protein_coding	Dnase1l3	ENSMUST00000026315	protein_coding	principal1	14	-1	7994573	4747
ENSMUSG00000019647	protein_coding	Sema6a	ENSMUST00000144223	retained_intron		18	-1	47368268	717
ENSMUSG00000049128	protein_coding	Ivl	ENSMUST00000053107	protein_coding	principal1	3	-1	92573735	1922
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000128970	protein_coding		7	-1	126584220	834
ENSMUSG00000019647	protein_coding	Sema6a	ENSMUST00000123228	protein_coding		18	-1	47281195	652
ENSMUSG00000024862	protein_coding	Klc2	ENSMUST00000025798	protein_coding		19	-1	5118300	2940
ENSMUSG00000073877	protein_coding	Gm13306	ENSMUST00000098122	protein_coding	principal3	4	1	42158092	418
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000125508	protein_coding		7	-1	126583523	725
ENSMUSG00000025279	protein_coding	Dnase1l3	ENSMUST00000145234	processed_transcript		14	-1	7977222	503
ENSMUSG00000032897	protein_coding	Nfyc	ENSMUST00000120779	protein_coding	principal1	4	-1	120815712	2006
ENSMUSG00000001946	protein_coding	Esam	ENSMUST00000002011	protein_coding	principal1	9	1	37528078	1865
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000126188	protein_coding	alternative2	19	-1	37207473	4224
ENSMUSG00000014158	protein_coding	Trpv4	ENSMUST00000112225	protein_coding	principal1	5	-1	114658418	3226
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000134246	retained_intron		7	-1	126583114	506
ENSMUSG00000083681	processed_pseudogene	Gm6640	ENSMUST00000120629	processed_pseudogene		16	-1	23718755	1587
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000134406	retained_intron		7	-1	126583316	913
ENSMUSG00000032897	protein_coding	Nfyc	ENSMUST00000145658	protein_coding		4	-1	120825707	346
ENSMUSG00000029833	protein_coding	Trim24	ENSMUST00000031859	protein_coding	principal3	6	1	37870811	4042
ENSMUSG00000083714	unprocessed_pseudogene	Fthl17-ps1	ENSMUST00000120058	unprocessed_pseudogene		X	1	9043727	516
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000134498	processed_transcript		7	-1	126583342	809
ENSMUSG00000032897	protein_coding	Nfyc	ENSMUST00000136236	protein_coding		4	-1	120825696	469
ENSMUSG00000018509	protein_coding	Cenpv	ENSMUST00000018653	protein_coding	principal1	11	-1	62539261	1032
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000150587	protein_coding		7	-1	126583566	525
ENSMUSG00000032897	protein_coding	Nfyc	ENSMUST00000134979	protein_coding		4	-1	120825684	654
ENSMUSG00000019647	protein_coding	Sema6a	ENSMUST00000115449	protein_coding		18	-1	47368868	6815
ENSMUSG00000029833	protein_coding	Trim24	ENSMUST00000120428	protein_coding	alternative2	6	1	37870811	3940
ENSMUSG00000073917	protein_coding	Olfr665	ENSMUST00000216971	protein_coding	principal1	7	1	104878056	3248
ENSMUSG00000038250	protein_coding	Usp38	ENSMUST00000042724	protein_coding	principal1	8	-1	81014928	4707
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000132580	protein_coding	principal3	19	-1	37207293	3148
ENSMUSG00000041684	protein_coding	Bivm	ENSMUST00000155917	protein_coding		1	1	44118957	641
ENSMUSG00000001946	protein_coding	Esam	ENSMUST00000146860	protein_coding		9	1	37528781	859
ENSMUSG00000024862	protein_coding	Klc2	ENSMUST00000116563	protein_coding	principal1	19	-1	5118560	3169
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000150311	protein_coding		7	-1	126584578	594
ENSMUSG00000032897	protein_coding	Nfyc	ENSMUST00000148081	processed_transcript		4	-1	120768217	355
ENSMUSG00000073917	protein_coding	Olfr665	ENSMUST00000216257	protein_coding	principal1	7	1	104878031	2298
ENSMUSG00000108180	TEC	Gm44141	ENSMUST00000204231	TEC		6	1	47635297	1583
ENSMUSG00000001946	protein_coding	Esam	ENSMUST00000144596	protein_coding		9	1	37530250	415
ENSMUSG00000041684	protein_coding	Bivm	ENSMUST00000138521	processed_transcript		1	1	44119000	341
ENSMUSG00000073917	protein_coding	Olfr665	ENSMUST00000215761	protein_coding	principal1	7	1	104878031	2522
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000123727	protein_coding	alternative2	19	-1	37198109	2411
ENSMUSG00000097255	processed_pseudogene	Rpl31-ps7	ENSMUST00000180629	processed_pseudogene		6	-1	47786374	379
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000147086	protein_coding		7	-1	126583554	460
ENSMUSG00000018509	protein_coding	Cenpv	ENSMUST00000135497	retained_intron		11	-1	62527896	744
ENSMUSG00000032897	protein_coding	Nfyc	ENSMUST00000127030	processed_transcript		4	-1	120762175	951
ENSMUSG00000024862	protein_coding	Klc2	ENSMUST00000113727	protein_coding		19	-1	5118298	2874
ENSMUSG00000073917	protein_coding	Olfr665	ENSMUST00000098165	protein_coding	principal1	7	1	104880709	951
ENSMUSG00000001946	protein_coding	Esam	ENSMUST00000123198	protein_coding		9	1	37530924	545
ENSMUSG00000029833	protein_coding	Trim24	ENSMUST00000149561	processed_transcript		6	1	37876330	941
ENSMUSG00000032897	protein_coding	Nfyc	ENSMUST00000145029	processed_transcript		4	-1	120765433	488
ENSMUSG00000074435	protein_coding	Smcp	ENSMUST00000194965	protein_coding	principal1	3	-1	92586204	744
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000128049	processed_transcript		7	-1	126584786	414
ENSMUSG00000038250	protein_coding	Usp38	ENSMUST00000211538	processed_transcript		8	-1	81014913	2556
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000126781	protein_coding		19	-1	37207508	2095
ENSMUSG00000030720	protein_coding	Cln3	ENSMUST00000116269	protein_coding	principal2	7	-1	126584280	2487
ENSMUSG00000024862	protein_coding	Klc2	ENSMUST00000142255	retained_intron		19	-1	5109480	758
ENSMUSG00000032897	protein_coding	Nfyc	ENSMUST00000097906	protein_coding	principal1	4	-1	120790481	1008
ENSMUSG00000014158	protein_coding	Trpv4	ENSMUST00000133019	retained_intron		5	-1	114636261	3074
ENSMUSG00000116467	processed_pseudogene	Gm49515	ENSMUST00000231073	processed_pseudogene		16	-1	23780127	548
ENSMUSG00000029833	protein_coding	Trim24	ENSMUST00000120238	protein_coding	alternative2	6	1	37900487	3258
ENSMUSG00000037982	antisense	Gm9725	ENSMUST00000123595	antisense		8	1	81013576	2328
ENSMUSG00000074435	protein_coding	Smcp	ENSMUST00000098888	protein_coding	principal1	3	-1	92588997	861
ENSMUSG00000001946	protein_coding	Esam	ENSMUST00000214142	nonsense_mediated_decay		9	1	37534638	216
ENSMUSG00000024862	protein_coding	Klc2	ENSMUST00000137403	retained_intron		19	-1	5111445	841
ENSMUSG00000116335	processed_pseudogene	Gm49516	ENSMUST00000229023	processed_pseudogene		16	1	23852991	880
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000133988	protein_coding		19	-1	37178017	659
ENSMUSG00000024862	protein_coding	Klc2	ENSMUST00000149806	retained_intron		19	-1	5111984	770
ENSMUSG00000085182	antisense	Gm13596	ENSMUST00000153354	antisense		2	1	68476082	292
ENSMUSG00000001946	protein_coding	Esam	ENSMUST00000131832	retained_intron		9	1	37536250	627
ENSMUSG00000037982	antisense	Gm9725	ENSMUST00000209272	antisense		8	1	81015143	642
ENSMUSG00000024862	protein_coding	Klc2	ENSMUST00000135827	retained_intron		19	-1	5114010	411
ENSMUSG00000080050	processed_pseudogene	Gm14864	ENSMUST00000116164	processed_pseudogene		X	-1	9047173	1087
ENSMUSG00000029833	protein_coding	Trim24	ENSMUST00000123007	retained_intron		6	1	37915221	677
ENSMUSG00000080952	processed_pseudogene	Gm5379	ENSMUST00000120973	processed_pseudogene		X	-1	9050112	826
ENSMUSG00000014158	protein_coding	Trpv4	ENSMUST00000112222	protein_coding		5	-1	114644899	2475
ENSMUSG00000018509	protein_coding	Cenpv	ENSMUST00000123542	processed_transcript		11	-1	62538485	536
ENSMUSG00000024862	protein_coding	Klc2	ENSMUST00000156717	protein_coding		19	-1	5117586	665
ENSMUSG00000105615	lincRNA	Gm31048	ENSMUST00000196103	lincRNA		5	-1	104246702	1061
ENSMUSG00000014158	protein_coding	Trpv4	ENSMUST00000112219	protein_coding		5	-1	114644899	2295
ENSMUSG00000063582	protein_coding	Olfr666	ENSMUST00000214757	protein_coding	principal1	7	-1	104895952	1949
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000142973	protein_coding		19	-1	37176056	557
ENSMUSG00000029833	protein_coding	Trim24	ENSMUST00000135387	retained_intron		6	1	37948559	1151
ENSMUSG00000037982	antisense	Gm9725	ENSMUST00000166229	antisense		8	1	81013576	2326
ENSMUSG00000014158	protein_coding	Trpv4	ENSMUST00000112217	protein_coding		5	-1	114644899	2436
ENSMUSG00000018509	protein_coding	Cenpv	ENSMUST00000156349	processed_transcript		11	-1	62538629	595
ENSMUSG00000075312	processed_pseudogene	Gm13597	ENSMUST00000121239	processed_pseudogene		2	1	68554555	375
ENSMUSG00000081653	processed_pseudogene	Gm11354	ENSMUST00000121974	processed_pseudogene		13	-1	26787786	422
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000136855	retained_intron		4	1	116137252	3448
ENSMUSG00000029797	protein_coding	Sspo	ENSMUST00000169350	protein_coding	principal2	6	1	48448229	15571
ENSMUSG00000063582	protein_coding	Olfr666	ENSMUST00000081116	protein_coding	principal1	7	-1	104893626	957
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000131917	protein_coding		19	-1	37208601	665
ENSMUSG00000014158	protein_coding	Trpv4	ENSMUST00000141828	retained_intron		5	-1	114630638	888
ENSMUSG00000018509	protein_coding	Cenpv	ENSMUST00000123181	nonsense_mediated_decay		11	-1	62539003	492
ENSMUSG00000108310	TEC	Gm44712	ENSMUST00000206250	TEC		6	-1	91877985	1076
ENSMUSG00000014158	protein_coding	Trpv4	ENSMUST00000212469	processed_transcript		5	-1	114644899	771
ENSMUSG00000082236	processed_pseudogene	Gm11355	ENSMUST00000121120	processed_pseudogene		13	-1	26899996	306
ENSMUSG00000103523	protein_coding	2210017I01Rik	ENSMUST00000195278	protein_coding	principal1	3	-1	92607492	822
ENSMUSG00000018509	protein_coding	Cenpv	ENSMUST00000138772	processed_transcript		11	-1	62539003	273
ENSMUSG00000039652	protein_coding	Cpeb3	ENSMUST00000128642	protein_coding		19	-1	37175216	450
ENSMUSG00000108794	unprocessed_pseudogene	Gm45195	ENSMUST00000205597	unprocessed_pseudogene		7	-1	44002863	1008
ENSMUSG00000116244	transcribed_unprocessed_pseudogene	Gm49461	ENSMUST00000229369	processed_transcript		2	1	68566442	485
ENSMUSG00000101300	lincRNA	Gm29130	ENSMUST00000191015	lincRNA		Y	-1	59712281	618
ENSMUSG00000116244	transcribed_unprocessed_pseudogene	Gm49461	ENSMUST00000229907	transcribed_unprocessed_pseudogene		2	1	68568842	630
ENSMUSG00000101300	lincRNA	Gm29130	ENSMUST00000191495	lincRNA		Y	-1	59712281	433
ENSMUSG00000097591	antisense	A330032B11Rik	ENSMUST00000180609	antisense		19	1	37173843	1919
ENSMUSG00000108539	unprocessed_pseudogene	Klk1b12-ps	ENSMUST00000206650	unprocessed_pseudogene		7	1	44004641	751
ENSMUSG00000116244	transcribed_unprocessed_pseudogene	Gm49461	ENSMUST00000230049	processed_transcript		2	1	68568844	379
ENSMUSG00000029797	protein_coding	Sspo	ENSMUST00000189910	retained_intron		6	1	48480605	2235
ENSMUSG00000060615	protein_coding	Ang4	ENSMUST00000073860	protein_coding	principal1	14	-1	51773590	709
ENSMUSG00000109734	lincRNA	Gm45272	ENSMUST00000211111	lincRNA		7	1	104908754	1693
ENSMUSG00000072249	protein_coding	Fthl17f	ENSMUST00000097029	protein_coding	principal1	X	1	9063015	847
ENSMUSG00000115996	lincRNA	Gm49462	ENSMUST00000230308	lincRNA		2	-1	68568555	256
ENSMUSG00000087120	antisense	Gm12279	ENSMUST00000142533	antisense		11	-1	62551041	294
ENSMUSG00000109734	lincRNA	Gm45272	ENSMUST00000209737	lincRNA		7	1	104908799	366
ENSMUSG00000029797	protein_coding	Sspo	ENSMUST00000185370	nonsense_mediated_decay		6	1	48488042	3632
ENSMUSG00000115973	bidirectional_promoter_lncRNA	Gm36002	ENSMUST00000230941	bidirectional_promoter_lncRNA		2	-1	68582260	240
ENSMUSG00000081959	processed_pseudogene	Gm16480	ENSMUST00000120439	processed_pseudogene		X	-1	9066866	832
ENSMUSG00000109734	lincRNA	Gm45272	ENSMUST00000209875	lincRNA		7	1	104909851	502
ENSMUSG00000029797	protein_coding	Sspo	ENSMUST00000188970	protein_coding		6	1	48493780	537
ENSMUSG00000083123	unprocessed_pseudogene	Fthl17-ps2	ENSMUST00000122268	unprocessed_pseudogene		X	1	9080044	528
ENSMUSG00000110330	processed_pseudogene	Gm45275	ENSMUST00000210057	processed_pseudogene		7	1	104911013	365
ENSMUSG00000042759	protein_coding	Apobr	ENSMUST00000039522	protein_coding	principal2	7	1	126584942	3685
ENSMUSG00000103416	TEC	Gm37338	ENSMUST00000191986	TEC		3	1	3188033	127
ENSMUSG00000115421	processed_transcript	Gm48917	ENSMUST00000226186	retained_intron		14	1	46671702	781
ENSMUSG00000115421	processed_transcript	Gm48917	ENSMUST00000227500	lincRNA		14	1	46671725	866
ENSMUSG00000042759	protein_coding	Apobr	ENSMUST00000131860	nonsense_mediated_decay		7	1	126584991	498
ENSMUSG00000029797	protein_coding	Sspo	ENSMUST00000043676	protein_coding	alternative2	6	1	48448229	15148
ENSMUSG00000034266	protein_coding	Batf	ENSMUST00000040536	protein_coding	principal1	12	1	85686669	955
ENSMUSG00000042759	protein_coding	Apobr	ENSMUST00000137646	protein_coding	alternative2	7	1	126584992	457
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000126737	processed_transcript		11	1	50377751	4577
ENSMUSG00000115015	lincRNA	D330046F09Rik	ENSMUST00000226949	lincRNA		14	-1	46673775	1072
ENSMUSG00000034266	protein_coding	Batf	ENSMUST00000222781	retained_intron		12	1	85689292	532
ENSMUSG00000042759	protein_coding	Apobr	ENSMUST00000138558	protein_coding		7	1	126587080	614
ENSMUSG00000042759	protein_coding	Apobr	ENSMUST00000144173	protein_coding		7	1	126587674	567
ENSMUSG00000004366	protein_coding	Sst	ENSMUST00000004480	protein_coding	principal1	16	-1	23890958	721
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000127964	processed_transcript		11	1	50377765	581
ENSMUSG00000102745	TEC	Gm37600	ENSMUST00000193764	TEC		1	1	91916260	3292
ENSMUSG00000064105	protein_coding	Cnnm2	ENSMUST00000099373	protein_coding	principal4	19	1	46761596	4955
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000121052	protein_coding	principal1	4	1	116137755	2693
ENSMUSG00000103028	processed_pseudogene	Gm8747	ENSMUST00000195392	processed_pseudogene		3	-1	3267027	751
ENSMUSG00000086848	protein_coding	Lce6a	ENSMUST00000138403	protein_coding	principal1	3	-1	92621660	795
ENSMUSG00000035179	protein_coding	Ppp1r32	ENSMUST00000237522	protein_coding	principal1	19	-1	10482928	1515
ENSMUSG00000086848	protein_coding	Lce6a	ENSMUST00000170676	protein_coding	principal1	3	-1	92621180	485
ENSMUSG00000081417	processed_pseudogene	Gm15603	ENSMUST00000119252	processed_pseudogene		1	1	10695123	492
ENSMUSG00000109318	unprocessed_pseudogene	Gm17780	ENSMUST00000207142	unprocessed_pseudogene		7	1	23786616	612
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000106498	protein_coding	principal1	4	1	116150518	2719
ENSMUSG00000035179	protein_coding	Ppp1r32	ENSMUST00000038842	protein_coding	principal1	19	-1	10482928	1507
ENSMUSG00000109310	processed_pseudogene	Gm44576	ENSMUST00000208876	processed_pseudogene		7	1	23800874	411
ENSMUSG00000064105	protein_coding	Cnnm2	ENSMUST00000077666	protein_coding	alternative1	19	1	46761604	3051
ENSMUSG00000047531	protein_coding	Rtp2	ENSMUST00000061030	protein_coding	principal1	16	-1	23930794	2428
ENSMUSG00000045797	protein_coding	4930402K13Rik	ENSMUST00000059967	protein_coding	principal1	X	1	9104562	1781
ENSMUSG00000095632	protein_coding	Vmn1r175	ENSMUST00000228383	protein_coding	principal1	7	-1	23810643	2878
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000106496	protein_coding		4	1	116150525	2613
ENSMUSG00000064105	protein_coding	Cnnm2	ENSMUST00000235378	retained_intron		19	1	46761605	1941
ENSMUSG00000095632	protein_coding	Vmn1r175	ENSMUST00000166141	protein_coding	principal1	7	-1	23809200	915
ENSMUSG00000035179	protein_coding	Ppp1r32	ENSMUST00000235392	protein_coding		19	-1	10482917	1359
ENSMUSG00000064105	protein_coding	Cnnm2	ENSMUST00000235671	processed_transcript		19	1	46865660	1296
ENSMUSG00000053719	protein_coding	Klk1b26	ENSMUST00000048945	protein_coding	principal1	7	1	44012168	1386
ENSMUSG00000047531	protein_coding	Rtp2	ENSMUST00000231038	protein_coding		16	-1	23932394	910
ENSMUSG00000035179	protein_coding	Ppp1r32	ENSMUST00000236733	protein_coding		19	-1	10482682	327
ENSMUSG00000087021	unprocessed_pseudogene	Fthl17-ps3	ENSMUST00000126259	unprocessed_pseudogene		X	1	9123467	513
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000150153	processed_transcript		11	1	50377769	870
ENSMUSG00000033769	protein_coding	Exoc6b	ENSMUST00000051531	retained_intron		6	-1	85069513	3803
ENSMUSG00000115690	lincRNA	Gm48924	ENSMUST00000226531	lincRNA		14	-1	46746399	2273
ENSMUSG00000033769	protein_coding	Exoc6b	ENSMUST00000046334	retained_intron		6	-1	85069457	3540
ENSMUSG00000108759	unprocessed_pseudogene	Klk1b18-ps	ENSMUST00000205780	unprocessed_pseudogene		7	1	44020847	167
ENSMUSG00000056782	protein_coding	Olfr667	ENSMUST00000217177	protein_coding	principal1	7	-1	104921482	2695
ENSMUSG00000021342	protein_coding	Prl	ENSMUST00000224228	protein_coding	alternative2	13	1	27057573	888
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000106494	protein_coding		4	1	116151431	2226
ENSMUSG00000108339	unprocessed_pseudogene	Klk1b28-ps	ENSMUST00000206374	unprocessed_pseudogene		7	1	44028854	217
ENSMUSG00000029306	protein_coding	Ibsp	ENSMUST00000031246	protein_coding	principal1	5	1	104299171	2068
ENSMUSG00000021342	protein_coding	Prl	ENSMUST00000224627	retained_intron		13	1	27057574	769
ENSMUSG00000056782	protein_coding	Olfr667	ENSMUST00000071362	protein_coding	principal1	7	-1	104917294	981
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000147612	processed_transcript		4	1	116154595	393
ENSMUSG00000033769	protein_coding	Exoc6b	ENSMUST00000162821	nonsense_mediated_decay		6	-1	85069502	1383
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000123371	processed_transcript		11	1	50377769	4002
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000133838	retained_intron		4	1	116155319	870
ENSMUSG00000033769	protein_coding	Exoc6b	ENSMUST00000204011	retained_intron		6	-1	84893988	4015
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000077817	protein_coding	alternative1	11	1	50377769	2126
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000127426	retained_intron		4	1	116155937	636
ENSMUSG00000033769	protein_coding	Exoc6b	ENSMUST00000160783	processed_transcript		6	-1	85069502	1565
ENSMUSG00000057770	protein_coding	Olfr668	ENSMUST00000215359	protein_coding	principal1	7	-1	104928057	3613
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000155718	processed_transcript		4	1	116155949	449
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000128220	processed_transcript		11	1	50378291	860
ENSMUSG00000028700	protein_coding	Pomgnt1	ENSMUST00000151325	retained_intron		4	1	116157392	790
ENSMUSG00000057770	protein_coding	Olfr668	ENSMUST00000164391	protein_coding	principal1	7	-1	104925762	957
ENSMUSG00000033769	protein_coding	Exoc6b	ENSMUST00000161443	retained_intron		6	-1	85069468	3110
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000129631	processed_transcript		11	1	50378291	582
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000133435	processed_transcript		11	1	50378291	1116
ENSMUSG00000033769	protein_coding	Exoc6b	ENSMUST00000162786	retained_intron		6	-1	85069475	565
ENSMUSG00000021342	protein_coding	Prl	ENSMUST00000018061	protein_coding	alternative2	13	1	27057577	886
ENSMUSG00000107629	processed_pseudogene	Gm44011	ENSMUST00000203336	processed_pseudogene		6	1	85062574	394
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000134230	processed_transcript		11	1	50378301	1724
ENSMUSG00000042501	protein_coding	Cpa6	ENSMUST00000153695	nonsense_mediated_decay		1	-1	10719945	1814
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000141668	processed_transcript		11	1	50382947	832
ENSMUSG00000108012	antisense	Gm44012	ENSMUST00000204154	antisense		6	1	84921123	424
ENSMUSG00000027242	protein_coding	Wdr76	ENSMUST00000028676	protein_coding	principal2	2	1	121506723	2789
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000132715	processed_transcript		11	1	50383087	582
ENSMUSG00000098142	processed_pseudogene	Gm7507	ENSMUST00000183053	processed_pseudogene		6	1	84812240	1008
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000014339	protein_coding	principal1	11	-1	100620168	2330
ENSMUSG00000019505	protein_coding	Ubb	ENSMUST00000019649	protein_coding	principal1	11	1	62551171	1499
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000156642	processed_transcript		11	1	50383179	914
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000150657	processed_transcript		11	1	50383242	163
ENSMUSG00000028701	protein_coding	Lurap1	ENSMUST00000030469	protein_coding	principal1	4	-1	116144609	5742
ENSMUSG00000023307	protein_coding	Marchf5	ENSMUST00000024078	protein_coding	principal1	19	1	37207543	1809
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000143301	processed_transcript		11	1	50383812	159
ENSMUSG00000021694	protein_coding	Ercc8	ENSMUST00000123657	nonsense_mediated_decay		13	1	108158731	2395
ENSMUSG00000073876	protein_coding	Gm13305	ENSMUST00000098121	protein_coding	principal1	4	-1	42168603	1953
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000140056	processed_transcript		11	1	50383831	816
ENSMUSG00000021694	protein_coding	Ercc8	ENSMUST00000137425	retained_intron		13	1	108158738	3163
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000128414	retained_intron		11	-1	100585736	1892
ENSMUSG00000057170	protein_coding	Prl3d1	ENSMUST00000225330	protein_coding	principal2	13	1	27094190	866
ENSMUSG00000027242	protein_coding	Wdr76	ENSMUST00000132373	retained_intron		2	1	121506755	3155
ENSMUSG00000021342	protein_coding	Prl	ENSMUST00000110369	protein_coding	principal2	13	1	27057570	895
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000151537	processed_transcript		11	1	50384963	677
ENSMUSG00000028701	protein_coding	Lurap1	ENSMUST00000135982	processed_transcript		4	-1	116151338	459
ENSMUSG00000073876	protein_coding	Gm13305	ENSMUST00000152686	retained_intron		4	-1	42159876	522
ENSMUSG00000036938	protein_coding	Try5	ENSMUST00000064324	protein_coding	principal1	6	-1	41314711	801
ENSMUSG00000019189	protein_coding	Rnf145	ENSMUST00000101327	protein_coding		11	1	44519442	4214
ENSMUSG00000019505	protein_coding	Ubb	ENSMUST00000136938	protein_coding		11	1	62551676	890
ENSMUSG00000114646	antisense	Gm47888	ENSMUST00000223686	antisense		13	-1	27058022	3082
ENSMUSG00000027242	protein_coding	Wdr76	ENSMUST00000099473	protein_coding		2	1	121506772	2315
ENSMUSG00000099997	processed_pseudogene	Tubb4b-ps2	ENSMUST00000187481	processed_pseudogene		1	-1	24595423	1337
ENSMUSG00000041684	protein_coding	Bivm	ENSMUST00000035991	protein_coding	principal1	1	1	44119162	3313
ENSMUSG00000073876	protein_coding	Gm13305	ENSMUST00000148376	retained_intron		4	-1	42160525	770
ENSMUSG00000007850	protein_coding	Hnrnph1	ENSMUST00000069304	protein_coding	principal3	11	1	50377719	2225
ENSMUSG00000019189	protein_coding	Rnf145	ENSMUST00000127907	processed_transcript		11	1	44518983	348
ENSMUSG00000036938	protein_coding	Try5	ENSMUST00000173916	protein_coding		6	-1	41316841	791
ENSMUSG00000023307	protein_coding	Marchf5	ENSMUST00000112391	protein_coding		19	1	37207568	1293
ENSMUSG00000113884	lincRNA	Gm2270	ENSMUST00000222858	lincRNA		12	1	90364252	797
ENSMUSG00000073876	protein_coding	Gm13305	ENSMUST00000154884	retained_intron		4	-1	42160390	438
ENSMUSG00000108328	unprocessed_pseudogene	Gm45196	ENSMUST00000206751	unprocessed_pseudogene		7	-1	44043530	825
ENSMUSG00000057170	protein_coding	Prl3d1	ENSMUST00000082079	protein_coding	alternative2	13	1	27094190	872
ENSMUSG00000085165	antisense	Gm12089	ENSMUST00000138402	antisense		11	1	29515086	428
ENSMUSG00000041684	protein_coding	Bivm	ENSMUST00000186280	processed_transcript		1	1	44119508	405
ENSMUSG00000027242	protein_coding	Wdr76	ENSMUST00000110602	protein_coding	principal2	2	1	121506783	4170
ENSMUSG00000113539	lincRNA	Gm47684	ENSMUST00000221123	lincRNA		12	-1	90398662	573
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000129346	retained_intron		11	-1	100585701	1674
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239494	nonsense_mediated_decay		11	-1	100591435	1120
ENSMUSG00000108440	unprocessed_pseudogene	Klk1b19-ps	ENSMUST00000205322	unprocessed_pseudogene		7	1	44045159	696
ENSMUSG00000113001	lincRNA	Gm40538	ENSMUST00000220610	lincRNA		12	-1	90408824	578
ENSMUSG00000027242	protein_coding	Wdr76	ENSMUST00000110603	protein_coding	alternative2	2	1	121509848	2341
ENSMUSG00000073876	protein_coding	Gm13305	ENSMUST00000129970	retained_intron		4	-1	42164734	2576
ENSMUSG00000023307	protein_coding	Marchf5	ENSMUST00000148105	retained_intron		19	1	37207576	991
ENSMUSG00000096981	antisense	Gm16845	ENSMUST00000216270	antisense		9	1	22071002	567
ENSMUSG00000019189	protein_coding	Rnf145	ENSMUST00000124959	processed_transcript		11	1	44520305	773
ENSMUSG00000081951	processed_pseudogene	Gm15352	ENSMUST00000118696	processed_pseudogene		8	1	13021941	270
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239391	retained_intron		11	-1	100597148	2248
ENSMUSG00000057173	protein_coding	Rfx8	ENSMUST00000151913	protein_coding	principal1	1	-1	39720997	2008
ENSMUSG00000085748	antisense	Gm12280	ENSMUST00000155836	antisense		11	-1	62566383	1624
ENSMUSG00000096981	antisense	Gm16845	ENSMUST00000180419	antisense		9	1	22071032	1415
ENSMUSG00000023307	protein_coding	Marchf5	ENSMUST00000128530	protein_coding		19	1	37217190	1033
ENSMUSG00000073876	protein_coding	Gm13305	ENSMUST00000133764	retained_intron		4	-1	42164736	726
ENSMUSG00000019189	protein_coding	Rnf145	ENSMUST00000150257	processed_transcript		11	1	44556831	674
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239453	processed_transcript		11	-1	100594912	1412
ENSMUSG00000108946	processed_pseudogene	Gm18598	ENSMUST00000207724	processed_pseudogene		7	1	23446299	597
ENSMUSG00000096859	protein_coding	Vmn1r176	ENSMUST00000226319	protein_coding	principal1	7	-1	23837372	2930
ENSMUSG00000100131	unprocessed_pseudogene	Gm28439	ENSMUST00000187714	unprocessed_pseudogene		1	-1	24612410	876
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000146840	protein_coding		11	-1	100613357	1828
ENSMUSG00000074447	protein_coding	Defa21	ENSMUST00000076754	protein_coding	principal1	8	1	21025545	418
ENSMUSG00000019189	protein_coding	Rnf145	ENSMUST00000129676	processed_transcript		11	1	44560019	614
ENSMUSG00000067736	unprocessed_pseudogene	Gm10222	ENSMUST00000088336	unprocessed_pseudogene		1	-1	24612700	294
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239426	processed_transcript		11	-1	100594725	1354
ENSMUSG00000109477	processed_pseudogene	Gm18306	ENSMUST00000207338	processed_pseudogene		7	-1	23448156	569
ENSMUSG00000096859	protein_coding	Vmn1r176	ENSMUST00000228793	protein_coding	principal1	7	-1	23837372	2959
ENSMUSG00000023944	protein_coding	Hsp90ab1	ENSMUST00000024739	protein_coding	principal1	17	-1	45573271	2520
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239482	processed_transcript		11	-1	100594890	1676
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239490	protein_coding		11	-1	100620178	1609
ENSMUSG00000096859	protein_coding	Vmn1r176	ENSMUST00000228280	protein_coding	principal1	7	-1	23837372	2532
ENSMUSG00000111842	protein_coding	Gm49318	ENSMUST00000213738	nonsense_mediated_decay	principal1	9	-1	22071259	727
ENSMUSG00000092496	unprocessed_pseudogene	Vmn1r-ps84	ENSMUST00000172853	unprocessed_pseudogene		7	-1	23487297	923
ENSMUSG00000019312	protein_coding	Grb7	ENSMUST00000019456	protein_coding	principal1	11	1	98446834	2397
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239410	protein_coding		11	-1	100620188	1900
ENSMUSG00000096859	protein_coding	Vmn1r176	ENSMUST00000227661	protein_coding	principal1	7	-1	23837372	2507
ENSMUSG00000057173	protein_coding	Rfx8	ENSMUST00000126760	processed_transcript		1	-1	39691871	711
ENSMUSG00000023944	protein_coding	Hsp90ab1	ENSMUST00000145205	retained_intron		17	-1	45569736	797
ENSMUSG00000041684	protein_coding	Bivm	ENSMUST00000114709	protein_coding	principal1	1	1	44119968	3570
ENSMUSG00000096859	protein_coding	Vmn1r176	ENSMUST00000226767	protein_coding	principal1	7	-1	23837372	2536
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239389	protein_coding		11	-1	100619607	1399
ENSMUSG00000019312	protein_coding	Grb7	ENSMUST00000132771	protein_coding		11	1	98446394	582
ENSMUSG00000023944	protein_coding	Hsp90ab1	ENSMUST00000165127	protein_coding		17	-1	45573253	572
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000136199	retained_intron		11	-1	100590534	1053
ENSMUSG00000096859	protein_coding	Vmn1r176	ENSMUST00000227129	protein_coding	principal1	7	-1	23837372	2955
ENSMUSG00000019998	protein_coding	Stx7	ENSMUST00000218050	retained_intron		10	1	24149302	723
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239418	nonsense_mediated_decay		11	-1	100619638	1560
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000148098	retained_intron		11	-1	100596179	1322
ENSMUSG00000096859	protein_coding	Vmn1r176	ENSMUST00000171073	protein_coding	principal1	7	-1	23835726	915
ENSMUSG00000041684	protein_coding	Bivm	ENSMUST00000129068	protein_coding		1	1	44119979	361
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239491	retained_intron		11	-1	100591936	897
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000155152	protein_coding		11	-1	100619611	811
ENSMUSG00000114254	processed_pseudogene	Gm48067	ENSMUST00000224411	processed_pseudogene		13	1	83687222	220
ENSMUSG00000023944	protein_coding	Hsp90ab1	ENSMUST00000166469	protein_coding		17	-1	45573255	656
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000137688	protein_coding		11	-1	100619597	946
ENSMUSG00000074925	protein_coding	Ptar1	ENSMUST00000237333	protein_coding	principal1	19	1	23687429	12574
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000239479	protein_coding		11	-1	100619627	2235
ENSMUSG00000019312	protein_coding	Grb7	ENSMUST00000129034	retained_intron		11	1	98453789	991
ENSMUSG00000029775	protein_coding	Klhdc10	ENSMUST00000068240	protein_coding	alternative1	6	1	30401868	3951
ENSMUSG00000107927	TEC	Gm44090	ENSMUST00000204669	TEC		6	1	86039934	1834
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000154972	protein_coding		11	-1	100619620	1049
ENSMUSG00000074925	protein_coding	Ptar1	ENSMUST00000236951	protein_coding		19	1	23687464	601
ENSMUSG00000023944	protein_coding	Hsp90ab1	ENSMUST00000146770	retained_intron		17	-1	45571582	685
ENSMUSG00000019189	protein_coding	Rnf145	ENSMUST00000019333	protein_coding	principal1	11	1	44518964	3570
ENSMUSG00000107842	antisense	Gm44089	ENSMUST00000203624	antisense		6	-1	86087080	1930
ENSMUSG00000053863	protein_coding	Mepe	ENSMUST00000066207	protein_coding	principal1	5	1	104325329	1682
ENSMUSG00000005553	protein_coding	Atp4a	ENSMUST00000167761	retained_intron		7	1	30712209	2601
ENSMUSG00000023944	protein_coding	Hsp90ab1	ENSMUST00000163966	nonsense_mediated_decay		17	-1	45573255	703
ENSMUSG00000019312	protein_coding	Grb7	ENSMUST00000133419	retained_intron		11	1	98451842	667
ENSMUSG00000074505	protein_coding	Fat3	ENSMUST00000217187	protein_coding		9	-1	15922756	6024
ENSMUSG00000023944	protein_coding	Hsp90ab1	ENSMUST00000151306	retained_intron		17	-1	45573271	764
ENSMUSG00000014195	protein_coding	Dnajc7	ENSMUST00000132886	protein_coding		11	-1	100619659	872
ENSMUSG00000030077	protein_coding	Chl1	ENSMUST00000203912	protein_coding		6	1	103510586	4628
ENSMUSG00000074925	protein_coding	Ptar1	ENSMUST00000235740	nonsense_mediated_decay		19	1	23687719	1283
ENSMUSG00000023944	protein_coding	Hsp90ab1	ENSMUST00000130406	protein_coding		17	-1	45572555	351
ENSMUSG00000091937	protein_coding	Gm3646	ENSMUST00000171319	protein_coding	principal1	1	-1	39805332	352
ENSMUSG00000029695	protein_coding	Aass	ENSMUST00000031707	protein_coding	principal1	6	-1	23132986	3701
ENSMUSG00000074925	protein_coding	Ptar1	ENSMUST00000099560	protein_coding		19	1	23687744	1722
ENSMUSG00000020620	protein_coding	Abca8b	ENSMUST00000020948	protein_coding	principal2	11	-1	109995845	7423
ENSMUSG00000042501	protein_coding	Cpa6	ENSMUST00000035577	protein_coding	principal1	1	-1	10719945	1932
ENSMUSG00000074925	protein_coding	Ptar1	ENSMUST00000067077	protein_coding		19	1	23723279	1756
ENSMUSG00000020620	protein_coding	Abca8b	ENSMUST00000106669	protein_coding	alternative2	11	-1	109995743	5052
ENSMUSG00000003410	protein_coding	Elavl3	ENSMUST00000003501	protein_coding	principal1	9	-1	22052010	5014
ENSMUSG00000042501	protein_coding	Cpa6	ENSMUST00000147575	retained_intron		1	-1	10477823	4752
ENSMUSG00000029695	protein_coding	Aass	ENSMUST00000138063	processed_transcript		6	-1	23127580	663
ENSMUSG00000042501	protein_coding	Cpa6	ENSMUST00000140938	processed_transcript		1	-1	10719905	624
ENSMUSG00000029775	protein_coding	Klhdc10	ENSMUST00000068259	protein_coding	principal3	6	1	30401896	5901
ENSMUSG00000003410	protein_coding	Elavl3	ENSMUST00000213700	protein_coding		9	-1	22026374	397
ENSMUSG00000103810	TEC	Gm38005	ENSMUST00000194845	TEC		1	-1	10451989	2745
ENSMUSG00000019312	protein_coding	Grb7	ENSMUST00000156328	retained_intron		11	1	98447068	2288
ENSMUSG00000029695	protein_coding	Aass	ENSMUST00000149864	protein_coding		6	-1	23127612	627
ENSMUSG00000083422	processed_pseudogene	Gm15604	ENSMUST00000118350	processed_pseudogene		1	-1	10555553	1456
ENSMUSG00000051788	protein_coding	4930564D02Rik	ENSMUST00000070584	protein_coding	principal1	3	1	105066844	737
ENSMUSG00000113464	processed_pseudogene	Gm47901	ENSMUST00000220921	processed_pseudogene		12	1	85728457	263
ENSMUSG00000003410	protein_coding	Elavl3	ENSMUST00000215901	protein_coding		9	-1	22052023	3037
ENSMUSG00000020325	protein_coding	Fstl3	ENSMUST00000020575	protein_coding	principal1	10	1	79777272	1955
ENSMUSG00000109980	lincRNA	Gm45538	ENSMUST00000210771	lincRNA		8	1	81061334	1061
ENSMUSG00000019312	protein_coding	Grb7	ENSMUST00000127914	retained_intron		11	1	98447048	2386
ENSMUSG00000029695	protein_coding	Aass	ENSMUST00000152280	processed_transcript		6	-1	23132916	470
ENSMUSG00000030077	protein_coding	Chl1	ENSMUST00000203489	retained_intron		6	1	103510962	3430
ENSMUSG00000029775	protein_coding	Klhdc10	ENSMUST00000132581	protein_coding		6	1	30401998	940
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000139979	protein_coding		6	-1	146554635	1005
ENSMUSG00000094615	processed_pseudogene	Gm4899	ENSMUST00000178708	processed_pseudogene		8	-1	81198348	719
ENSMUSG00000116827	processed_pseudogene	Gm5063	ENSMUST00000232126	processed_pseudogene		16	-1	44801649	976
ENSMUSG00000029829	protein_coding	Tmem213	ENSMUST00000031851	protein_coding	principal1	6	1	38109255	631
ENSMUSG00000109928	processed_pseudogene	Gm45539	ENSMUST00000210313	processed_pseudogene		8	-1	81295063	428
ENSMUSG00000021694	protein_coding	Ercc8	ENSMUST00000120672	protein_coding		13	1	108158738	1144
ENSMUSG00000101426	lincRNA	Gm20978	ENSMUST00000190688	lincRNA		Y	-1	59735210	174
ENSMUSG00000115084	TEC	Gm49246	ENSMUST00000228391	TEC		15	-1	36503431	3455
ENSMUSG00000021694	protein_coding	Ercc8	ENSMUST00000129117	nonsense_mediated_decay		13	1	108158738	2199
ENSMUSG00000113036	processed_pseudogene	Gm47021	ENSMUST00000221517	processed_pseudogene		13	-1	12260270	478
ENSMUSG00000020325	protein_coding	Fstl3	ENSMUST00000170380	retained_intron		10	1	79777292	637
ENSMUSG00000031443	protein_coding	F7	ENSMUST00000033820	protein_coding	principal1	8	1	13026034	1859
ENSMUSG00000097949	processed_pseudogene	Gm5354	ENSMUST00000182417	processed_pseudogene		8	-1	81309149	973
ENSMUSG00000116605	processed_pseudogene	Gm19142	ENSMUST00000231348	processed_pseudogene		16	-1	44805504	1601
ENSMUSG00000038600	protein_coding	Atp6v0a4	ENSMUST00000132736	processed_transcript		6	-1	38051561	508
ENSMUSG00000020325	protein_coding	Fstl3	ENSMUST00000168798	processed_transcript		10	1	79780581	1549
ENSMUSG00000029775	protein_coding	Klhdc10	ENSMUST00000144272	protein_coding		6	1	30417036	1387
ENSMUSG00000029775	protein_coding	Klhdc10	ENSMUST00000123494	protein_coding		6	1	30417045	681
ENSMUSG00000090715	protein_coding	Vmn1r167	ENSMUST00000227713	protein_coding	principal1	7	-1	23507206	2677
ENSMUSG00000029775	protein_coding	Klhdc10	ENSMUST00000135566	protein_coding		6	1	30427396	738
ENSMUSG00000090715	protein_coding	Vmn1r167	ENSMUST00000164527	protein_coding	principal1	7	-1	23505589	948
ENSMUSG00000108936	processed_pseudogene	Gm8745	ENSMUST00000207846	processed_pseudogene		7	1	23526174	782
ENSMUSG00000030077	protein_coding	Chl1	ENSMUST00000066905	protein_coding	principal1	6	1	103511068	7562
ENSMUSG00000109182	processed_pseudogene	Gm18195	ENSMUST00000207604	processed_pseudogene		7	-1	23536274	706
ENSMUSG00000014198	protein_coding	Zfp385c	ENSMUST00000103119	protein_coding	principal1	11	-1	100650693	2766
ENSMUSG00000030000	protein_coding	Add2	ENSMUST00000203529	retained_intron		6	1	86028681	1408
ENSMUSG00000029775	protein_coding	Klhdc10	ENSMUST00000150854	retained_intron		6	1	30443770	3003
ENSMUSG00000074291	protein_coding	Vmn1r168	ENSMUST00000235361	protein_coding	alternative2	7	1	23539732	6704
ENSMUSG00000019777	protein_coding	Hdac2	ENSMUST00000019911	protein_coding	principal1	10	1	36974544	2005
ENSMUSG00000030077	protein_coding	Chl1	ENSMUST00000203830	protein_coding	principal1	6	1	103511174	4152
ENSMUSG00000074291	protein_coding	Vmn1r168	ENSMUST00000236919	processed_transcript		7	1	23539732	5830
ENSMUSG00000014198	protein_coding	Zfp385c	ENSMUST00000148560	processed_transcript		11	-1	100651684	894
ENSMUSG00000074291	protein_coding	Vmn1r168	ENSMUST00000098704	protein_coding	principal2	7	1	23540720	930
ENSMUSG00000014198	protein_coding	Zfp385c	ENSMUST00000151589	protein_coding		11	-1	100657622	751
ENSMUSG00000030077	protein_coding	Chl1	ENSMUST00000204321	protein_coding		6	1	103511330	678
ENSMUSG00000103101	TEC	Gm37048	ENSMUST00000194827	TEC		1	1	91975987	5578
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000203545	protein_coding		6	-1	146557545	1298
ENSMUSG00000019777	protein_coding	Hdac2	ENSMUST00000105510	protein_coding		10	1	36974570	3250
ENSMUSG00000014198	protein_coding	Zfp385c	ENSMUST00000153494	protein_coding		11	-1	100692455	403
ENSMUSG00000036249	protein_coding	Rbm43	ENSMUST00000102767	protein_coding	principal1	2	-1	51935007	2057
ENSMUSG00000020323	protein_coding	Prss57	ENSMUST00000169684	protein_coding	principal1	10	-1	79790961	2841
ENSMUSG00000038481	protein_coding	Cdk19	ENSMUST00000216736	processed_transcript		10	1	40339564	2424
ENSMUSG00000094602	protein_coding	Vmn1r169	ENSMUST00000228832	protein_coding	principal1	7	1	23575526	2749
ENSMUSG00000094602	protein_coding	Vmn1r169	ENSMUST00000227547	protein_coding	principal1	7	1	23575526	2322
ENSMUSG00000094602	protein_coding	Vmn1r169	ENSMUST00000226669	protein_coding	principal1	7	1	23575526	2326
ENSMUSG00000036249	protein_coding	Rbm43	ENSMUST00000102768	protein_coding	principal1	2	-1	51935163	2106
ENSMUSG00000020323	protein_coding	Prss57	ENSMUST00000167987	protein_coding		10	-1	79784565	702
ENSMUSG00000094602	protein_coding	Vmn1r169	ENSMUST00000227932	protein_coding	principal1	7	1	23575526	2745
ENSMUSG00000020323	protein_coding	Prss57	ENSMUST00000171681	protein_coding		10	-1	79784583	495
ENSMUSG00000094602	protein_coding	Vmn1r169	ENSMUST00000170290	protein_coding	principal1	7	1	23577185	915
ENSMUSG00000019777	protein_coding	Hdac2	ENSMUST00000128031	processed_transcript		10	1	36991766	906
ENSMUSG00000085604	antisense	Dhx58os	ENSMUST00000137154	antisense		11	1	100687417	1594
ENSMUSG00000019777	protein_coding	Hdac2	ENSMUST00000123010	retained_intron		10	1	36998172	539
ENSMUSG00000035258	protein_coding	Abi3bp	ENSMUST00000231832	protein_coding	alternative2	16	1	56477883	2800
ENSMUSG00000054727	protein_coding	1700013H16Rik	ENSMUST00000067940	protein_coding	principal1	X	-1	53757831	1224
ENSMUSG00000094187	protein_coding	Vmn1r170	ENSMUST00000170166	protein_coding	principal1	7	1	23606175	915
ENSMUSG00000059301	transcribed_processed_pseudogene	Gm5434	ENSMUST00000071825	transcribed_processed_pseudogene		12	1	36090379	1451
ENSMUSG00000020323	protein_coding	Prss57	ENSMUST00000020573	protein_coding	principal1	10	-1	79788985	2693
ENSMUSG00000074505	protein_coding	Fat3	ENSMUST00000217308	protein_coding	principal1	9	-1	16501285	18760
ENSMUSG00000030077	protein_coding	Chl1	ENSMUST00000205098	protein_coding		6	1	103697750	2464
ENSMUSG00000021694	protein_coding	Ercc8	ENSMUST00000054835	protein_coding	principal1	13	1	108158738	2111
ENSMUSG00000074446	protein_coding	Defa23	ENSMUST00000098899	protein_coding	principal1	8	1	21055047	411
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000227774	protein_coding	alternative2	7	1	23630722	2867
ENSMUSG00000019998	protein_coding	Stx7	ENSMUST00000020174	protein_coding	principal1	10	1	24149317	2502
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000226771	protein_coding	alternative2	7	1	23630722	2718
ENSMUSG00000107823	TEC	Gm44436	ENSMUST00000204200	TEC		6	1	103615963	1494
ENSMUSG00000074505	protein_coding	Fat3	ENSMUST00000215388	retained_intron		9	-1	15957822	2214
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000228681	protein_coding	alternative2	7	1	23630722	2633
ENSMUSG00000074505	protein_coding	Fat3	ENSMUST00000213517	retained_intron		9	-1	16006750	1391
ENSMUSG00000059631	lincRNA	1500035N22Rik	ENSMUST00000075081	lincRNA		5	1	24985842	865
ENSMUSG00000060568	protein_coding	Fam78b	ENSMUST00000156025	nonsense_mediated_decay		1	1	167001432	2426
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000228559	protein_coding	alternative2	7	1	23630722	2637
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000228674	protein_coding	alternative2	7	1	23630722	2488
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000227866	protein_coding	alternative2	7	1	23630722	2566
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000227386	protein_coding	alternative2	7	1	23630722	2570
ENSMUSG00000074505	protein_coding	Fat3	ENSMUST00000082170	protein_coding		9	-1	16378231	18456
ENSMUSG00000019998	protein_coding	Stx7	ENSMUST00000220041	protein_coding	principal1	10	1	24149327	3435
ENSMUSG00000107804	TEC	Gm44439	ENSMUST00000203379	TEC		6	1	103526252	3592
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000228484	protein_coding	alternative2	7	1	23630722	2421
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000226321	protein_coding	alternative2	7	1	23630722	3067
ENSMUSG00000107511	TEC	Gm44440	ENSMUST00000203139	TEC		6	1	103605521	2373
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000226128	protein_coding	alternative2	7	1	23630722	3063
ENSMUSG00000060568	protein_coding	Fam78b	ENSMUST00000126198	protein_coding	principal1	1	1	167001466	2951
ENSMUSG00000107919	processed_pseudogene	Gm7946	ENSMUST00000203326	processed_pseudogene		6	-1	103551850	958
ENSMUSG00000111652	TEC	Gm48726	ENSMUST00000215220	TEC		9	-1	16435395	2529
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000226733	protein_coding	alternative2	7	1	23630722	2918
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000228228	protein_coding	alternative2	7	1	23630722	2863
ENSMUSG00000019998	protein_coding	Stx7	ENSMUST00000218643	retained_intron		10	1	24149353	362
ENSMUSG00000021694	protein_coding	Ercc8	ENSMUST00000152634	nonsense_mediated_decay		13	1	108158754	2095
ENSMUSG00000096375	unprocessed_pseudogene	Gm7094	ENSMUST00000178379	unprocessed_pseudogene		1	1	21272403	366
ENSMUSG00000019998	protein_coding	Stx7	ENSMUST00000219553	protein_coding		10	1	24152447	223
ENSMUSG00000053896	protein_coding	4933409G03Rik	ENSMUST00000102713	protein_coding	principal2	2	1	68582413	1339
ENSMUSG00000054759	protein_coding	Krtap5-2	ENSMUST00000190456	protein_coding	principal2	7	-1	142176005	1471
ENSMUSG00000062483	protein_coding	Vmn1r171	ENSMUST00000078458	protein_coding	principal2	7	1	23631988	1581
ENSMUSG00000066553	processed_pseudogene	Gm6969	ENSMUST00000140065	processed_pseudogene		12	-1	24639010	342
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000032370	protein_coding	alternative2	6	-1	142387036	2112
ENSMUSG00000060568	protein_coding	Fam78b	ENSMUST00000122929	nonsense_mediated_decay		1	1	167001580	2245
ENSMUSG00000036249	protein_coding	Rbm43	ENSMUST00000132703	processed_transcript		2	-1	51934674	584
ENSMUSG00000021694	protein_coding	Ercc8	ENSMUST00000142931	nonsense_mediated_decay		13	1	108158771	1923
ENSMUSG00000094637	protein_coding	Vmn1r204	ENSMUST00000228195	protein_coding	principal1	13	1	22553198	2936
ENSMUSG00000036249	protein_coding	Rbm43	ENSMUST00000126090	processed_transcript		2	-1	51933335	703
ENSMUSG00000060568	protein_coding	Fam78b	ENSMUST00000128373	nonsense_mediated_decay		1	1	167001589	4203
ENSMUSG00000042179	protein_coding	Pnliprp1	ENSMUST00000048644	protein_coding	principal1	19	1	58728887	1619
ENSMUSG00000054759	protein_coding	Krtap5-2	ENSMUST00000067978	protein_coding	alternative2	7	-1	142176005	937
ENSMUSG00000053896	protein_coding	4933409G03Rik	ENSMUST00000137117	protein_coding	alternative2	2	1	68592765	587
ENSMUSG00000086446	antisense	Prkag2os1	ENSMUST00000134633	antisense		5	1	24902569	991
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000100832	protein_coding	alternative2	6	-1	142387074	3054
ENSMUSG00000021694	protein_coding	Ercc8	ENSMUST00000123182	nonsense_mediated_decay		13	1	108158775	458
ENSMUSG00000036249	protein_coding	Rbm43	ENSMUST00000152800	processed_transcript		2	-1	51927026	893
ENSMUSG00000094637	protein_coding	Vmn1r204	ENSMUST00000091728	protein_coding	principal1	13	1	22556201	909
ENSMUSG00000021694	protein_coding	Ercc8	ENSMUST00000133957	nonsense_mediated_decay		13	1	108158803	933
ENSMUSG00000042179	protein_coding	Pnliprp1	ENSMUST00000236445	protein_coding		19	1	58728992	889
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000141504	protein_coding		6	-1	142366789	3671
ENSMUSG00000036249	protein_coding	Rbm43	ENSMUST00000165313	protein_coding	principal1	2	-1	51934644	1975
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000032427	protein_coding	principal1	6	-1	146577835	3059
ENSMUSG00000100296	protein_coding	Vmn1r205	ENSMUST00000185475	protein_coding	principal1	13	-1	22593000	1101
ENSMUSG00000066101	protein_coding	Gm10153	ENSMUST00000210290	protein_coding	principal1	7	-1	142190389	963
ENSMUSG00000021694	protein_coding	Ercc8	ENSMUST00000123138	nonsense_mediated_decay		13	1	108158804	719
ENSMUSG00000087314	antisense	Prkag2os2	ENSMUST00000123610	antisense		5	1	24873544	1432
ENSMUSG00000066101	protein_coding	Gm10153	ENSMUST00000084415	protein_coding		7	-1	142190389	522
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000138578	processed_transcript		6	-1	142363662	647
ENSMUSG00000042179	protein_coding	Pnliprp1	ENSMUST00000235738	retained_intron		19	1	58729902	578
ENSMUSG00000071521	protein_coding	Try10	ENSMUST00000072103	protein_coding	principal1	6	1	41354105	860
ENSMUSG00000101939	unprocessed_pseudogene	Gm28438	ENSMUST00000188299	unprocessed_pseudogene		1	-1	24613119	345
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000204234	retained_intron		6	-1	146551380	1740
ENSMUSG00000035523	protein_coding	Vmn1r172	ENSMUST00000038694	protein_coding	principal1	7	1	23658316	9009
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000152994	retained_intron		6	-1	146550401	370
ENSMUSG00000113023	processed_pseudogene	Gm47686	ENSMUST00000220911	processed_pseudogene		12	1	90491625	485
ENSMUSG00000042179	protein_coding	Pnliprp1	ENSMUST00000235461	nonsense_mediated_decay		19	1	58730496	671
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000139546	retained_intron		6	-1	146554035	873
ENSMUSG00000066839	protein_coding	Ecsit	ENSMUST00000179422	protein_coding	principal1	9	-1	22085402	1462
ENSMUSG00000035523	protein_coding	Vmn1r172	ENSMUST00000173101	protein_coding	principal1	7	1	23658316	9109
ENSMUSG00000042179	protein_coding	Pnliprp1	ENSMUST00000235509	retained_intron		19	1	58736990	613
ENSMUSG00000061845	protein_coding	Defa35	ENSMUST00000078121	protein_coding	principal1	8	1	21065038	398
ENSMUSG00000042179	protein_coding	Pnliprp1	ENSMUST00000235457	retained_intron		19	1	58740436	469
ENSMUSG00000060568	protein_coding	Fam78b	ENSMUST00000165874	protein_coding	principal1	1	1	167001417	4986
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000135277	processed_transcript		6	-1	146556235	640
ENSMUSG00000060568	protein_coding	Fam78b	ENSMUST00000190081	protein_coding	principal1	1	1	167001417	4666
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000132963	retained_intron		6	-1	146554812	454
ENSMUSG00000115021	protein_coding	Vmn1r173	ENSMUST00000226233	protein_coding	principal1	7	1	23700703	9416
ENSMUSG00000087663	unprocessed_pseudogene	Defa-ps3	ENSMUST00000142705	unprocessed_pseudogene		8	1	21078141	282
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000131662	protein_coding		6	-1	146576267	1185
ENSMUSG00000115021	protein_coding	Vmn1r173	ENSMUST00000227987	protein_coding	principal1	7	1	23700703	9233
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000111803	protein_coding	principal3	6	-1	142387087	3389
ENSMUSG00000066839	protein_coding	Ecsit	ENSMUST00000180180	protein_coding	principal1	9	-1	22085438	1676
ENSMUSG00000115021	protein_coding	Vmn1r173	ENSMUST00000174055	protein_coding	principal1	7	1	23702342	942
ENSMUSG00000020220	protein_coding	Vps13d	ENSMUST00000036579	protein_coding	principal1	4	-1	145195005	15849
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000126996	retained_intron		6	-1	146566501	426
ENSMUSG00000040250	protein_coding	Ints13	ENSMUST00000205078	retained_intron		6	-1	146577780	4601
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000123912	protein_coding		6	-1	142363574	324
ENSMUSG00000066839	protein_coding	Ecsit	ENSMUST00000177967	protein_coding		9	-1	22085427	862
ENSMUSG00000020220	protein_coding	Vps13d	ENSMUST00000130704	nonsense_mediated_decay		4	-1	145091950	6143
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000154870	retained_intron		6	-1	142364217	783
ENSMUSG00000066839	protein_coding	Ecsit	ENSMUST00000217445	retained_intron		9	-1	22085435	893
ENSMUSG00000066839	protein_coding	Ecsit	ENSMUST00000098937	protein_coding	principal1	9	-1	22085427	1673
ENSMUSG00000017830	protein_coding	Dhx58	ENSMUST00000017974	protein_coding	principal1	11	-1	100704271	2412
ENSMUSG00000020459	protein_coding	Mtif2	ENSMUST00000129893	processed_transcript		11	1	29539971	1572
ENSMUSG00000020220	protein_coding	Vps13d	ENSMUST00000020441	protein_coding		4	-1	145190666	15665
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000155149	processed_transcript		6	-1	142368564	667
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000143102	retained_intron		6	-1	142367730	323
ENSMUSG00000074346	antisense	Kcnd3os	ENSMUST00000143893	antisense		3	-1	105451727	718
ENSMUSG00000020220	protein_coding	Vps13d	ENSMUST00000185113	protein_coding		4	-1	145155486	10176
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000129694	protein_coding		6	-1	142386974	710
ENSMUSG00000017830	protein_coding	Dhx58	ENSMUST00000140543	processed_transcript		11	-1	100696620	786
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000203772	protein_coding		6	-1	142387009	824
ENSMUSG00000038895	protein_coding	Zfp653	ENSMUST00000216916	retained_intron		9	-1	22071276	2534
ENSMUSG00000020220	protein_coding	Vps13d	ENSMUST00000147511	processed_transcript		4	-1	144983961	802
ENSMUSG00000030243	protein_coding	Recql	ENSMUST00000128082	protein_coding		6	-1	142387082	349
ENSMUSG00000030549	protein_coding	Rhcg	ENSMUST00000032766	protein_coding	principal1	7	-1	79617657	2090
ENSMUSG00000017830	protein_coding	Dhx58	ENSMUST00000149869	processed_transcript		11	-1	100699235	529
ENSMUSG00000074346	antisense	Kcnd3os	ENSMUST00000130683	antisense		3	-1	105452955	1091
ENSMUSG00000058153	protein_coding	Sez6l	ENSMUST00000079491	protein_coding	alternative2	5	-1	112576975	5857
ENSMUSG00000030549	protein_coding	Rhcg	ENSMUST00000172788	protein_coding		7	-1	79594929	457
ENSMUSG00000030549	protein_coding	Rhcg	ENSMUST00000161084	protein_coding		7	-1	79607873	454
ENSMUSG00000058153	protein_coding	Sez6l	ENSMUST00000212480	protein_coding	alternative2	5	-1	112576975	5857
ENSMUSG00000020220	protein_coding	Vps13d	ENSMUST00000141208	retained_intron		4	-1	145054143	3811
ENSMUSG00000058153	protein_coding	Sez6l	ENSMUST00000200575	protein_coding		5	-1	112475127	4998
ENSMUSG00000108318	TEC	Gm45170	ENSMUST00000206746	TEC		7	-1	79603676	1671
ENSMUSG00000017830	protein_coding	Dhx58	ENSMUST00000126167	processed_transcript		11	-1	100704253	744
ENSMUSG00000017830	protein_coding	Dhx58	ENSMUST00000150656	processed_transcript		11	-1	100703347	440
ENSMUSG00000020220	protein_coding	Vps13d	ENSMUST00000144835	processed_transcript		4	-1	145051034	689
ENSMUSG00000020220	protein_coding	Vps13d	ENSMUST00000142308	retained_intron		4	-1	145058198	4371
ENSMUSG00000017830	protein_coding	Dhx58	ENSMUST00000132930	processed_transcript		11	-1	100704271	982
ENSMUSG00000020220	protein_coding	Vps13d	ENSMUST00000155670	retained_intron		4	-1	145072602	358
ENSMUSG00000038600	protein_coding	Atp6v0a4	ENSMUST00000114908	protein_coding	principal1	6	-1	38109549	3307
ENSMUSG00000039703	protein_coding	Nploc4	ENSMUST00000044271	protein_coding	principal1	11	-1	120437708	4121
ENSMUSG00000020220	protein_coding	Vps13d	ENSMUST00000132700	retained_intron		4	-1	145194995	2253
ENSMUSG00000034258	protein_coding	Flvcr2	ENSMUST00000040461	protein_coding	principal1	12	1	85746539	3435
ENSMUSG00000039703	protein_coding	Nploc4	ENSMUST00000103017	protein_coding		11	-1	120437708	4025
ENSMUSG00000038600	protein_coding	Atp6v0a4	ENSMUST00000040259	protein_coding	principal1	6	-1	38124586	3285
ENSMUSG00000039703	protein_coding	Nploc4	ENSMUST00000137041	processed_transcript		11	-1	120383503	516
ENSMUSG00000034258	protein_coding	Flvcr2	ENSMUST00000221585	processed_transcript		12	1	85774830	642
ENSMUSG00000038600	protein_coding	Atp6v0a4	ENSMUST00000135594	retained_intron		6	-1	38055153	988
ENSMUSG00000103448	TEC	Gm37133	ENSMUST00000192705	TEC		1	-1	10784377	1922
ENSMUSG00000038600	protein_coding	Atp6v0a4	ENSMUST00000144752	retained_intron		6	-1	38083372	591
ENSMUSG00000100212	processed_pseudogene	Gm5522	ENSMUST00000189483	processed_pseudogene		1	1	10805281	1242
ENSMUSG00000039703	protein_coding	Nploc4	ENSMUST00000132519	processed_transcript		11	-1	120421457	842
ENSMUSG00000058153	protein_coding	Sez6l	ENSMUST00000075387	protein_coding	principal3	5	-1	112577185	6055
ENSMUSG00000038600	protein_coding	Atp6v0a4	ENSMUST00000138385	retained_intron		6	-1	38097185	666
ENSMUSG00000100648	processed_pseudogene	Gm28659	ENSMUST00000188013	processed_pseudogene		1	1	10868688	759
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000097644	protein_coding	principal1	1	-1	92180341	8100
ENSMUSG00000039703	protein_coding	Nploc4	ENSMUST00000136095	processed_transcript		11	-1	120416931	775
ENSMUSG00000038600	protein_coding	Atp6v0a4	ENSMUST00000130816	retained_intron		6	-1	38124489	554
ENSMUSG00000015092	protein_coding	Edf1	ENSMUST00000015236	protein_coding	principal1	2	1	25557847	722
ENSMUSG00000105346	processed_pseudogene	Gm18894	ENSMUST00000198794	processed_pseudogene		3	1	102074453	694
ENSMUSG00000058153	protein_coding	Sez6l	ENSMUST00000197425	protein_coding	alternative2	5	-1	112577177	3199
ENSMUSG00000092107	unprocessed_pseudogene	Ear-ps4	ENSMUST00000166834	unprocessed_pseudogene		14	-1	51793753	450
ENSMUSG00000058153	protein_coding	Sez6l	ENSMUST00000212758	protein_coding		5	-1	112576868	2664
ENSMUSG00000019894	protein_coding	Slc6a15	ENSMUST00000218844	retained_intron		10	1	103367783	2436
ENSMUSG00000092290	unprocessed_pseudogene	Gm20452	ENSMUST00000174686	unprocessed_pseudogene		17	1	36500360	513
ENSMUSG00000092493	unprocessed_pseudogene	Gm20451	ENSMUST00000173452	unprocessed_pseudogene		17	1	36507180	273
ENSMUSG00000043029	protein_coding	Trpv3	ENSMUST00000049676	protein_coding	principal1	11	1	73267388	5835
ENSMUSG00000030708	protein_coding	Dnajb13	ENSMUST00000207405	protein_coding	principal1	7	-1	100514960	2592
ENSMUSG00000015092	protein_coding	Edf1	ENSMUST00000153008	processed_transcript		2	1	25557871	765
ENSMUSG00000002221	protein_coding	Paxip1	ENSMUST00000002291	protein_coding	principal1	5	-1	27791550	5850
ENSMUSG00000015092	protein_coding	Edf1	ENSMUST00000134689	processed_transcript		2	1	25557897	910
ENSMUSG00000015092	protein_coding	Edf1	ENSMUST00000144395	processed_transcript		2	1	25558139	346
ENSMUSG00000015092	protein_coding	Edf1	ENSMUST00000142288	processed_transcript		2	1	25560585	710
ENSMUSG00000002221	protein_coding	Paxip1	ENSMUST00000197625	retained_intron		5	-1	27751295	736
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000189303	processed_transcript		1	-1	92006855	3287
ENSMUSG00000050961	protein_coding	AY358078	ENSMUST00000053821	protein_coding	principal1	14	1	51800046	1461
ENSMUSG00000041671	protein_coding	Pyroxd1	ENSMUST00000041852	protein_coding	principal1	6	1	142345654	2831
ENSMUSG00000002221	protein_coding	Paxip1	ENSMUST00000196641	retained_intron		5	-1	27765737	717
ENSMUSG00000091293	transcribed_processed_pseudogene	Gm6047	ENSMUST00000167221	transcribed_processed_pseudogene		14	1	51825720	574
ENSMUSG00000030708	protein_coding	Dnajb13	ENSMUST00000130534	processed_transcript		7	-1	100513399	1159
ENSMUSG00000092296	unprocessed_pseudogene	Gm20454	ENSMUST00000172713	unprocessed_pseudogene		17	1	36534281	221
ENSMUSG00000041671	protein_coding	Pyroxd1	ENSMUST00000204971	retained_intron		6	1	142345667	2208
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000191327	retained_intron		1	-1	91934864	589
ENSMUSG00000091812	unprocessed_pseudogene	Ear-ps5	ENSMUST00000164700	unprocessed_pseudogene		14	1	51838999	463
ENSMUSG00000030708	protein_coding	Dnajb13	ENSMUST00000054923	protein_coding		7	-1	100511781	847
ENSMUSG00000002221	protein_coding	Paxip1	ENSMUST00000196734	nonsense_mediated_decay		5	-1	27791395	749
ENSMUSG00000101634	lincRNA	1700066B17Rik	ENSMUST00000187091	lincRNA		1	-1	39845699	675
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000187308	protein_coding		1	-1	91975501	938
ENSMUSG00000030708	protein_coding	Dnajb13	ENSMUST00000154516	nonsense_mediated_decay		7	-1	100514796	905
ENSMUSG00000038895	protein_coding	Zfp653	ENSMUST00000043922	protein_coding	principal3	9	-1	22071345	2108
ENSMUSG00000101634	lincRNA	1700066B17Rik	ENSMUST00000191299	lincRNA		1	-1	39847330	536
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000189730	retained_intron		1	-1	91992626	3576
ENSMUSG00000002221	protein_coding	Paxip1	ENSMUST00000199993	processed_transcript		5	-1	27791691	381
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000185267	retained_intron		1	-1	92006860	3191
ENSMUSG00000062148	protein_coding	Ear6	ENSMUST00000169070	protein_coding	principal1	14	1	51853699	893
ENSMUSG00000101634	lincRNA	1700066B17Rik	ENSMUST00000186683	lincRNA		1	-1	39847334	267
ENSMUSG00000002221	protein_coding	Paxip1	ENSMUST00000196605	retained_intron		5	-1	27791383	515
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000186002	protein_coding		1	-1	92180297	849
ENSMUSG00000002221	protein_coding	Paxip1	ENSMUST00000199714	retained_intron		5	-1	27790373	3829
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000185341	processed_transcript		1	-1	92113331	407
ENSMUSG00000101578	protein_coding	Vmn1r206	ENSMUST00000227244	protein_coding	principal1	13	-1	22624251	3970
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000187622	processed_transcript		1	-1	92113331	410
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000212867	processed_transcript		1	-1	92195694	797
ENSMUSG00000017837	protein_coding	Nkiras2	ENSMUST00000107376	protein_coding	principal1	11	1	100619244	1727
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000212408	processed_transcript		1	-1	92195699	650
ENSMUSG00000038895	protein_coding	Zfp653	ENSMUST00000179605	protein_coding	alternative2	9	-1	22071341	1888
ENSMUSG00000041671	protein_coding	Pyroxd1	ENSMUST00000137098	retained_intron		6	1	142345678	3011
ENSMUSG00000101578	protein_coding	Vmn1r206	ENSMUST00000187140	protein_coding	principal1	13	-1	22621135	1135
ENSMUSG00000062148	protein_coding	Ear6	ENSMUST00000074477	protein_coding	principal1	14	1	51853768	713
ENSMUSG00000041671	protein_coding	Pyroxd1	ENSMUST00000123289	processed_transcript		6	1	142346936	914
ENSMUSG00000081914	unprocessed_pseudogene	Vmn1r-ps109	ENSMUST00000119308	unprocessed_pseudogene		13	-1	22626482	725
ENSMUSG00000017837	protein_coding	Nkiras2	ENSMUST00000051947	protein_coding	principal1	11	1	100620284	831
ENSMUSG00000038895	protein_coding	Zfp653	ENSMUST00000216244	retained_intron		9	-1	22071376	2892
ENSMUSG00000041671	protein_coding	Pyroxd1	ENSMUST00000153912	retained_intron		6	1	142352940	726
ENSMUSG00000026313	protein_coding	Hdac4	ENSMUST00000008995	protein_coding	principal1	1	-1	92148393	3937
ENSMUSG00000083413	unprocessed_pseudogene	Vmn1r-ps110	ENSMUST00000117530	unprocessed_pseudogene		13	-1	22629164	1094
ENSMUSG00000071519	protein_coding	Prss3	ENSMUST00000096003	protein_coding	principal1	6	-1	41377678	822
ENSMUSG00000102565	TEC	Gm37036	ENSMUST00000192836	TEC		1	-1	92022097	2506
ENSMUSG00000025091	protein_coding	Pnliprp2	ENSMUST00000026081	protein_coding	principal1	19	1	58759719	1572
ENSMUSG00000075137	protein_coding	Olfr1163	ENSMUST00000215268	protein_coding	principal1	2	-1	88071830	1611
ENSMUSG00000063455	protein_coding	D630045J12Rik	ENSMUST00000117556	protein_coding	alternative2	6	-1	38253955	10916
ENSMUSG00000075137	protein_coding	Olfr1163	ENSMUST00000099835	protein_coding	principal1	2	-1	88071407	1043
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000165867	protein_coding	alternative2	8	1	110846600	2442
ENSMUSG00000030413	protein_coding	Pglyrp1	ENSMUST00000206206	processed_transcript		7	1	18871331	520
ENSMUSG00000106296	sense_intronic	4632404M16Rik	ENSMUST00000197326	sense_intronic		3	1	102134615	2882
ENSMUSG00000057609	protein_coding	Lce1a1	ENSMUST00000074142	protein_coding	principal1	3	-1	92648307	705
ENSMUSG00000017837	protein_coding	Nkiras2	ENSMUST00000017981	protein_coding	principal1	11	1	100622876	2097
ENSMUSG00000015568	protein_coding	Lpl	ENSMUST00000015712	protein_coding	principal1	8	1	68880491	4115
ENSMUSG00000030413	protein_coding	Pglyrp1	ENSMUST00000206569	processed_transcript		7	1	18871370	586
ENSMUSG00000017837	protein_coding	Nkiras2	ENSMUST00000127547	processed_transcript		11	1	100622920	776
ENSMUSG00000084986	antisense	Gm16224	ENSMUST00000127711	antisense		4	-1	135144285	412
ENSMUSG00000015568	protein_coding	Lpl	ENSMUST00000213071	retained_intron		8	1	68880555	3954
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000174165	nonsense_mediated_decay		8	1	110847024	590
ENSMUSG00000063455	protein_coding	D630045J12Rik	ENSMUST00000127925	retained_intron		6	-1	38147431	3543
ENSMUSG00000015568	protein_coding	Lpl	ENSMUST00000168401	nonsense_mediated_decay		8	1	68880555	1900
ENSMUSG00000116118	processed_pseudogene	Gm49511	ENSMUST00000229449	processed_pseudogene		16	1	15750923	270
ENSMUSG00000017837	protein_coding	Nkiras2	ENSMUST00000155840	processed_transcript		11	1	100622948	988
ENSMUSG00000017837	protein_coding	Nkiras2	ENSMUST00000142993	protein_coding		11	1	100623011	671
ENSMUSG00000015568	protein_coding	Lpl	ENSMUST00000101463	retained_intron		8	1	68880657	2423
ENSMUSG00000063455	protein_coding	D630045J12Rik	ENSMUST00000144973	retained_intron		6	-1	38147374	3435
ENSMUSG00000027923	protein_coding	Lce1b	ENSMUST00000029531	protein_coding	principal1	3	-1	92656926	647
ENSMUSG00000015568	protein_coding	Lpl	ENSMUST00000169749	processed_transcript		8	1	68890744	851
ENSMUSG00000040896	protein_coding	Kcnd3	ENSMUST00000098761	protein_coding	alternative1	3	1	105452330	7169
ENSMUSG00000040242	protein_coding	Fgfr1op2	ENSMUST00000037836	protein_coding		6	1	146577203	687
ENSMUSG00000063455	protein_coding	D630045J12Rik	ENSMUST00000149557	retained_intron		6	-1	38194422	4433
ENSMUSG00000040896	protein_coding	Kcnd3	ENSMUST00000141694	retained_intron		3	1	105452573	3726
ENSMUSG00000030413	protein_coding	Pglyrp1	ENSMUST00000032573	protein_coding	principal1	7	1	18884680	694
ENSMUSG00000063455	protein_coding	D630045J12Rik	ENSMUST00000152464	retained_intron		6	-1	38168616	643
ENSMUSG00000038738	protein_coding	Shank1	ENSMUST00000107938	protein_coding	principal2	7	1	44310253	9826
ENSMUSG00000021252	protein_coding	Erg28	ENSMUST00000021676	protein_coding	principal1	12	-1	85824522	1169
ENSMUSG00000038481	protein_coding	Cdk19	ENSMUST00000044672	protein_coding	principal1	10	1	40349308	5807
ENSMUSG00000022672	protein_coding	Prkdc	ENSMUST00000182134	retained_intron		16	1	15637866	3063
ENSMUSG00000030413	protein_coding	Pglyrp1	ENSMUST00000206481	retained_intron		7	1	18884693	1008
ENSMUSG00000035551	protein_coding	Igfbpl1	ENSMUST00000044297	protein_coding	principal1	4	-1	45826923	2864
ENSMUSG00000105223	processed_pseudogene	Gm43433	ENSMUST00000196573	processed_pseudogene		5	1	27817490	481
ENSMUSG00000048440	protein_coding	Cyp4f16	ENSMUST00000169591	protein_coding	principal1	17	1	32536558	2242
ENSMUSG00000082178	processed_pseudogene	Gm11307	ENSMUST00000121088	processed_pseudogene		13	1	22675660	929
ENSMUSG00000021252	protein_coding	Erg28	ENSMUST00000131681	processed_transcript		12	-1	85824512	696
ENSMUSG00000038738	protein_coding	Shank1	ENSMUST00000107935	protein_coding	alternative2	7	1	44312688	6649
ENSMUSG00000063455	protein_coding	D630045J12Rik	ENSMUST00000169256	protein_coding	principal2	6	-1	38254009	10968
ENSMUSG00000040896	protein_coding	Kcnd3	ENSMUST00000118360	protein_coding	principal4	3	1	105453086	2668
ENSMUSG00000029836	protein_coding	Cbx3	ENSMUST00000094623	protein_coding	principal1	6	1	51470360	1080
ENSMUSG00000035551	protein_coding	Igfbpl1	ENSMUST00000145102	processed_transcript		4	-1	45816363	747
ENSMUSG00000021252	protein_coding	Erg28	ENSMUST00000124311	retained_intron		12	-1	85824544	3226
ENSMUSG00000040896	protein_coding	Kcnd3	ENSMUST00000147209	processed_transcript		3	1	105669005	199
ENSMUSG00000021252	protein_coding	Erg28	ENSMUST00000148323	retained_intron		12	-1	85822250	401
ENSMUSG00000038738	protein_coding	Shank1	ENSMUST00000107934	protein_coding	alternative2	7	1	44312707	6477
ENSMUSG00000020459	protein_coding	Mtif2	ENSMUST00000020749	protein_coding	principal1	11	1	29526448	2425
ENSMUSG00000057513	protein_coding	Vmn1r177	ENSMUST00000073967	protein_coding	principal1	7	-1	23866449	930
ENSMUSG00000085221	antisense	Gm11309	ENSMUST00000127108	antisense		13	1	22691299	613
ENSMUSG00000038481	protein_coding	Cdk19	ENSMUST00000095743	protein_coding		10	1	40349337	3973
ENSMUSG00000083673	unprocessed_pseudogene	Vmn1r-ps111	ENSMUST00000121014	unprocessed_pseudogene		13	-1	22691966	997
ENSMUSG00000021252	protein_coding	Erg28	ENSMUST00000142331	protein_coding		12	-1	85824550	408
ENSMUSG00000105375	processed_pseudogene	Gm20239	ENSMUST00000196610	processed_pseudogene		5	1	27820970	982
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000172668	protein_coding		8	1	110847034	368
ENSMUSG00000040896	protein_coding	Kcnd3	ENSMUST00000079169	protein_coding	principal4	3	1	105458782	2102
ENSMUSG00000094687	protein_coding	Defa25	ENSMUST00000095425	protein_coding	principal1	8	1	21084442	279
ENSMUSG00000109210	processed_pseudogene	Gm18206	ENSMUST00000207027	processed_pseudogene		7	1	23870853	926
ENSMUSG00000019894	protein_coding	Slc6a15	ENSMUST00000179636	protein_coding	principal1	10	1	103367808	3543
ENSMUSG00000105753	sense_intronic	Gm43847	ENSMUST00000200070	sense_intronic		3	1	105502907	1940
ENSMUSG00000020459	protein_coding	Mtif2	ENSMUST00000144321	protein_coding		11	1	29526450	1605
ENSMUSG00000082616	processed_pseudogene	Gm6025	ENSMUST00000121517	processed_pseudogene		X	1	53762815	201
ENSMUSG00000038481	protein_coding	Cdk19	ENSMUST00000215000	nonsense_mediated_decay		10	1	40349358	5681
ENSMUSG00000038738	protein_coding	Shank1	ENSMUST00000134470	processed_transcript		7	1	44336016	608
ENSMUSG00000031445	protein_coding	Proz	ENSMUST00000210050	retained_intron		8	1	13060914	2618
ENSMUSG00000006782	protein_coding	Cnp	ENSMUST00000103120	protein_coding	principal1	11	1	100574904	2357
ENSMUSG00000020459	protein_coding	Mtif2	ENSMUST00000133452	protein_coding		11	1	29526408	741
ENSMUSG00000027400	protein_coding	Pdyn	ENSMUST00000028883	protein_coding	principal1	2	-1	129699833	2386
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000034203	protein_coding	principal3	8	1	110847034	2737
ENSMUSG00000038481	protein_coding	Cdk19	ENSMUST00000214659	nonsense_mediated_decay		10	1	40349526	3814
ENSMUSG00000019894	protein_coding	Slc6a15	ENSMUST00000217905	protein_coding		10	1	103367832	860
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000102749	protein_coding	principal3	3	1	95434388	2699
ENSMUSG00000020459	protein_coding	Mtif2	ENSMUST00000136351	protein_coding		11	1	29526436	725
ENSMUSG00000038738	protein_coding	Shank1	ENSMUST00000154776	retained_intron		7	1	44342135	987
ENSMUSG00000020459	protein_coding	Mtif2	ENSMUST00000132783	protein_coding		11	1	29533290	739
ENSMUSG00000006782	protein_coding	Cnp	ENSMUST00000148034	processed_transcript		11	1	100575112	322
ENSMUSG00000020459	protein_coding	Mtif2	ENSMUST00000156352	processed_transcript		11	1	29526447	697
ENSMUSG00000038491	antisense	Cdk19os	ENSMUST00000143103	antisense		10	-1	40350103	1124
ENSMUSG00000038491	antisense	Cdk19os	ENSMUST00000044774	antisense		10	-1	40350103	534
ENSMUSG00000027400	protein_coding	Pdyn	ENSMUST00000130608	protein_coding		2	-1	129698658	369
ENSMUSG00000038738	protein_coding	Shank1	ENSMUST00000127164	retained_intron		7	1	44350762	784
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000174702	retained_intron		8	1	110847039	577
ENSMUSG00000048440	protein_coding	Cyp4f16	ENSMUST00000003416	protein_coding	principal1	17	1	32536569	2227
ENSMUSG00000019894	protein_coding	Slc6a15	ENSMUST00000074204	protein_coding	principal1	10	1	103367843	3607
ENSMUSG00000027400	protein_coding	Pdyn	ENSMUST00000152113	retained_intron		2	-1	129699844	647
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000107161	protein_coding		3	1	95434404	4260
ENSMUSG00000020459	protein_coding	Mtif2	ENSMUST00000093239	protein_coding	principal1	11	1	29526457	2741
ENSMUSG00000059334	protein_coding	Zfp36l3	ENSMUST00000071711	protein_coding	principal1	X	-1	53776394	2347
ENSMUSG00000006782	protein_coding	Cnp	ENSMUST00000150414	processed_transcript		11	1	100575524	2904
ENSMUSG00000042985	protein_coding	Upk3b	ENSMUST00000062606	protein_coding	principal1	5	1	136038496	3530
ENSMUSG00000084308	processed_pseudogene	Gm14593	ENSMUST00000119948	processed_pseudogene		X	1	53772836	294
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000174723	nonsense_mediated_decay		8	1	110847051	531
ENSMUSG00000102870	unprocessed_pseudogene	Gm17868	ENSMUST00000192761	unprocessed_pseudogene		1	1	167141155	668
ENSMUSG00000006782	protein_coding	Cnp	ENSMUST00000147403	processed_transcript		11	1	100575891	1618
ENSMUSG00000019894	protein_coding	Slc6a15	ENSMUST00000219936	retained_intron		10	1	103393450	2395
ENSMUSG00000103333	processed_pseudogene	Gm37994	ENSMUST00000192124	processed_pseudogene		1	-1	167186388	409
ENSMUSG00000090411	protein_coding	Vmn1r174	ENSMUST00000228331	protein_coding	principal1	7	1	23752270	9058
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000174800	processed_transcript		8	1	110847051	480
ENSMUSG00000020653	protein_coding	Klf11	ENSMUST00000020982	protein_coding	principal1	12	1	24651274	4086
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000107160	protein_coding		3	1	95434428	783
ENSMUSG00000109112	unitary_pseudogene	Gm44544	ENSMUST00000207052	unitary_pseudogene		11	-1	100643117	1844
ENSMUSG00000004319	protein_coding	Clcn3	ENSMUST00000056508	protein_coding	principal3	8	-1	60955233	5684
ENSMUSG00000090411	protein_coding	Vmn1r174	ENSMUST00000167551	protein_coding	principal1	7	1	23753911	942
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000172897	nonsense_mediated_decay		8	1	110847051	609
ENSMUSG00000040242	protein_coding	Fgfr1op2	ENSMUST00000067404	protein_coding	alternative1	6	1	146577859	2766
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000149051	retained_intron		3	1	95434519	4035
ENSMUSG00000070691	protein_coding	Runx3	ENSMUST00000056977	protein_coding	principal2	4	1	135120652	3884
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000174398	protein_coding		8	1	110847054	2292
ENSMUSG00000100062	lincRNA	1700063A18Rik	ENSMUST00000190901	lincRNA		1	-1	96021758	356
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000126534	protein_coding	principal1	7	1	100493337	3988
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000156653	retained_intron		3	1	95466288	2825
ENSMUSG00000070691	protein_coding	Runx3	ENSMUST00000119564	protein_coding	alternative2	4	1	135152496	1855
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000174679	protein_coding		8	1	110849871	542
ENSMUSG00000020653	protein_coding	Klf11	ENSMUST00000139940	protein_coding		12	1	24651896	380
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000140060	retained_intron		3	1	95474116	778
ENSMUSG00000108891	protein_coding	Olfr1291-ps1	ENSMUST00000121345	protein_coding	principal1	2	1	111497180	5403
ENSMUSG00000070691	protein_coding	Runx3	ENSMUST00000156478	retained_intron		4	1	135152938	447
ENSMUSG00000108891	protein_coding	Olfr1291-ps1	ENSMUST00000219064	protein_coding		2	1	111499338	897
ENSMUSG00000020653	protein_coding	Klf11	ENSMUST00000146894	protein_coding		12	1	24651896	667
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000136413	protein_coding		3	1	95476097	378
ENSMUSG00000070691	protein_coding	Runx3	ENSMUST00000137027	processed_transcript		4	1	135153160	227
ENSMUSG00000102658	TEC	Gm37076	ENSMUST00000192033	TEC		1	1	96313242	2294
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000147094	retained_intron		3	1	95489405	526
ENSMUSG00000020653	protein_coding	Klf11	ENSMUST00000144046	protein_coding		12	1	24652154	673
ENSMUSG00000070691	protein_coding	Runx3	ENSMUST00000140642	processed_transcript		4	1	135153505	372
ENSMUSG00000100336	lincRNA	Gm29601	ENSMUST00000187961	lincRNA		1	-1	96556703	1349
ENSMUSG00000034083	protein_coding	Ccdc174	ENSMUST00000138868	retained_intron		6	1	91878053	3980
ENSMUSG00000040242	protein_coding	Fgfr1op2	ENSMUST00000111663	protein_coding	principal3	6	1	146577859	2880
ENSMUSG00000070691	protein_coding	Runx3	ENSMUST00000127109	processed_transcript		4	1	135154436	353
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000173501	retained_intron		8	1	110859704	881
ENSMUSG00000104831	processed_pseudogene	B020017C02Rik	ENSMUST00000197444	processed_pseudogene		3	-1	54634568	1688
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000207890	processed_transcript		7	1	100493354	498
ENSMUSG00000094074	unprocessed_pseudogene	Olfr1292-ps1	ENSMUST00000118137	unprocessed_pseudogene		2	-1	111509511	939
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000126381	retained_intron		7	1	100493364	2841
ENSMUSG00000040242	protein_coding	Fgfr1op2	ENSMUST00000058245	protein_coding		6	1	146577921	918
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000207748	protein_coding		7	1	100493386	1116
ENSMUSG00000031904	protein_coding	Slc7a6	ENSMUST00000034378	protein_coding	principal1	8	1	106168857	3750
ENSMUSG00000040242	protein_coding	Fgfr1op2	ENSMUST00000205231	processed_transcript		6	1	146577940	528
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000129324	protein_coding		7	1	100493795	670
ENSMUSG00000039106	protein_coding	Htr5a	ENSMUST00000036227	protein_coding	principal1	5	1	27842149	5376
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000090804	protein_coding	alternative2	3	1	95434390	4325
ENSMUSG00000040242	protein_coding	Fgfr1op2	ENSMUST00000147862	retained_intron		6	1	146577942	1894
ENSMUSG00000004319	protein_coding	Clcn3	ENSMUST00000093490	protein_coding		8	-1	60983300	5518
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000153287	protein_coding		7	1	100494067	743
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000172542	nonsense_mediated_decay		8	1	110859859	1280
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000133044	protein_coding		7	1	100496079	742
ENSMUSG00000104882	processed_pseudogene	Gm43096	ENSMUST00000196173	processed_pseudogene		5	-1	27860438	421
ENSMUSG00000106390	processed_pseudogene	Gm5551	ENSMUST00000199720	processed_pseudogene		5	1	27860449	690
ENSMUSG00000040242	protein_coding	Fgfr1op2	ENSMUST00000160697	processed_transcript		6	1	146588321	600
ENSMUSG00000047344	protein_coding	Lancl3	ENSMUST00000069763	protein_coding	principal1	X	1	9199902	3991
ENSMUSG00000118586	processed_pseudogene	AC156021.1	ENSMUST00000239249	processed_pseudogene		5	1	27971317	5734
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000173794	retained_intron		8	1	110863100	379
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000151221	processed_transcript		7	1	100497196	464
ENSMUSG00000031753	protein_coding	Cog4	ENSMUST00000172497	retained_intron		8	1	110880988	538
ENSMUSG00000029836	protein_coding	Cbx3	ENSMUST00000031862	protein_coding	principal1	6	1	51470530	1889
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000133498	processed_transcript		7	1	100497268	478
ENSMUSG00000025351	protein_coding	Cd63	ENSMUST00000219317	protein_coding	principal1	10	1	128900989	1109
ENSMUSG00000004319	protein_coding	Clcn3	ENSMUST00000145741	processed_transcript		8	-1	60922960	2954
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000138673	processed_transcript		7	1	100498141	396
ENSMUSG00000084136	protein_coding	Vmn1r207	ENSMUST00000237024	protein_coding	principal1	13	-1	22729629	4314
ENSMUSG00000084136	protein_coding	Vmn1r207	ENSMUST00000236800	protein_coding	principal1	13	-1	22729629	4403
ENSMUSG00000025351	protein_coding	Cd63	ENSMUST00000105229	protein_coding	principal1	10	1	128908820	1043
ENSMUSG00000079694	protein_coding	Gm14862	ENSMUST00000115553	protein_coding	principal1	X	-1	9256899	870
ENSMUSG00000031445	protein_coding	Proz	ENSMUST00000211363	protein_coding		8	1	13060943	984
ENSMUSG00000015522	protein_coding	Arnt	ENSMUST00000015666	protein_coding		3	1	95434428	2603
ENSMUSG00000084136	protein_coding	Vmn1r207	ENSMUST00000119931	protein_coding	principal1	13	-1	22726622	939
ENSMUSG00000048440	protein_coding	Cyp4f16	ENSMUST00000165515	nonsense_mediated_decay		17	1	32536577	2078
ENSMUSG00000029836	protein_coding	Cbx3	ENSMUST00000156463	retained_intron		6	1	51470663	1217
ENSMUSG00000033685	protein_coding	Ucp2	ENSMUST00000149808	processed_transcript		7	1	100498346	519
ENSMUSG00000104777	processed_pseudogene	Gm4865	ENSMUST00000196284	processed_pseudogene		5	-1	28001306	1309
ENSMUSG00000104215	processed_pseudogene	Rpl13-ps4	ENSMUST00000194776	processed_pseudogene		3	1	92664214	628
ENSMUSG00000027861	protein_coding	Casq2	ENSMUST00000029454	protein_coding	principal2	3	1	102086415	2556
ENSMUSG00000031904	protein_coding	Slc7a6	ENSMUST00000213020	retained_intron		8	1	106168875	3200
ENSMUSG00000082540	unprocessed_pseudogene	Vmn1r-ps112	ENSMUST00000117475	unprocessed_pseudogene		13	-1	22733633	544
ENSMUSG00000029836	protein_coding	Cbx3	ENSMUST00000114445	protein_coding		6	1	51470666	1585
ENSMUSG00000048440	protein_coding	Cyp4f16	ENSMUST00000237245	nonsense_mediated_decay		17	1	32536586	2065
ENSMUSG00000025351	protein_coding	Cd63	ENSMUST00000220308	protein_coding		10	1	128909345	682
ENSMUSG00000029836	protein_coding	Cbx3	ENSMUST00000153699	retained_intron		6	1	51470677	308
ENSMUSG00000031904	protein_coding	Slc7a6	ENSMUST00000212377	nonsense_mediated_decay		8	1	106168875	2672
ENSMUSG00000031445	protein_coding	Proz	ENSMUST00000211453	nonsense_mediated_decay		8	1	13060943	1636
ENSMUSG00000048440	protein_coding	Cyp4f16	ENSMUST00000170956	processed_transcript		17	1	32536595	804
ENSMUSG00000005553	protein_coding	Atp4a	ENSMUST00000005692	protein_coding	principal1	7	1	30712209	3485
ENSMUSG00000029836	protein_coding	Cbx3	ENSMUST00000114446	protein_coding	principal1	6	1	51470695	1719
ENSMUSG00000004319	protein_coding	Clcn3	ENSMUST00000110302	protein_coding	alternative1	8	-1	60954748	3768
ENSMUSG00000048440	protein_coding	Cyp4f16	ENSMUST00000164628	retained_intron		17	1	32536601	498
ENSMUSG00000027861	protein_coding	Casq2	ENSMUST00000165540	protein_coding	alternative2	3	1	102086546	2434
ENSMUSG00000029836	protein_coding	Cbx3	ENSMUST00000141711	protein_coding		6	1	51470746	498
ENSMUSG00000027861	protein_coding	Casq2	ENSMUST00000164123	protein_coding		3	1	102086639	936
ENSMUSG00000048440	protein_coding	Cyp4f16	ENSMUST00000169252	nonsense_mediated_decay		17	1	32536617	908
ENSMUSG00000029836	protein_coding	Cbx3	ENSMUST00000203404	retained_intron		6	1	51477458	2926
ENSMUSG00000031904	protein_coding	Slc7a6	ENSMUST00000212421	protein_coding		8	1	106168886	408
ENSMUSG00000048440	protein_coding	Cyp4f16	ENSMUST00000163736	retained_intron		17	1	32542633	486
ENSMUSG00000062082	protein_coding	Cd200r4	ENSMUST00000176819	protein_coding	principal1	16	1	44811733	1796
ENSMUSG00000103243	protein_coding	Lce1d	ENSMUST00000029524	protein_coding	principal1	3	-1	92687210	678
ENSMUSG00000104940	TEC	Gm42908	ENSMUST00000197508	TEC		5	1	123401072	870
ENSMUSG00000031904	protein_coding	Slc7a6	ENSMUST00000211824	protein_coding		8	1	106169105	766
ENSMUSG00000048440	protein_coding	Cyp4f16	ENSMUST00000168346	retained_intron		17	1	32542954	1040
ENSMUSG00000031445	protein_coding	Proz	ENSMUST00000033822	protein_coding	principal1	8	1	13060965	3361
ENSMUSG00000020340	protein_coding	Cyfip2	ENSMUST00000093166	protein_coding	principal1	11	-1	46312294	6298
ENSMUSG00000027861	protein_coding	Casq2	ENSMUST00000159521	processed_transcript		3	1	102125814	628
ENSMUSG00000106636	processed_transcript	Gm43813	ENSMUST00000196847	sense_intronic		5	1	123406487	2294
ENSMUSG00000031904	protein_coding	Slc7a6	ENSMUST00000212837	retained_intron		8	1	106169106	359
ENSMUSG00000048440	protein_coding	Cyp4f16	ENSMUST00000168285	retained_intron		17	1	32546372	891
ENSMUSG00000115575	lincRNA	Gm49024	ENSMUST00000227643	lincRNA		14	1	34661707	998
ENSMUSG00000031904	protein_coding	Slc7a6	ENSMUST00000212802	protein_coding		8	1	106178351	616
ENSMUSG00000027861	protein_coding	Casq2	ENSMUST00000159833	retained_intron		3	1	102144051	567
ENSMUSG00000025351	protein_coding	Cd63	ENSMUST00000026407	protein_coding	principal1	10	1	128909699	1063
ENSMUSG00000115451	lincRNA	Gm49025	ENSMUST00000227707	lincRNA		14	-1	34668339	309
ENSMUSG00000105342	sense_intronic	Gm43244	ENSMUST00000196994	sense_intronic		3	1	102129938	1285
ENSMUSG00000108829	unprocessed_pseudogene	Vmn2r-ps89	ENSMUST00000209195	unprocessed_pseudogene		8	-1	4538187	1010
ENSMUSG00000103149	TEC	AA914427	ENSMUST00000193194	TEC		16	1	17922043	1166
ENSMUSG00000005553	protein_coding	Atp4a	ENSMUST00000170371	protein_coding		7	1	30712232	3447
ENSMUSG00000062082	protein_coding	Cd200r4	ENSMUST00000176321	protein_coding		16	1	44811756	2005
ENSMUSG00000020340	protein_coding	Cyfip2	ENSMUST00000142017	protein_coding		11	-1	46270669	3074
ENSMUSG00000106636	processed_transcript	Gm43813	ENSMUST00000200134	TEC		5	1	123406487	5378
ENSMUSG00000020340	protein_coding	Cyfip2	ENSMUST00000129474	protein_coding		11	-1	46312220	362
ENSMUSG00000062598	protein_coding	Vmn1r178	ENSMUST00000226450	protein_coding	principal1	7	1	23892009	2880
ENSMUSG00000092414	unprocessed_pseudogene	Gm20453	ENSMUST00000173968	unprocessed_pseudogene		17	-1	36546113	226
ENSMUSG00000025351	protein_coding	Cd63	ENSMUST00000220245	retained_intron		10	1	128909922	2894
ENSMUSG00000106254	TEC	Gm42907	ENSMUST00000199793	TEC		5	1	123397240	2148
ENSMUSG00000062598	protein_coding	Vmn1r178	ENSMUST00000226640	protein_coding		7	1	23892009	2282
ENSMUSG00000062082	protein_coding	Cd200r4	ENSMUST00000114626	protein_coding	principal1	16	1	44820728	1700
ENSMUSG00000062598	protein_coding	Vmn1r178	ENSMUST00000226489	protein_coding		7	1	23892009	2644
ENSMUSG00000068890	protein_coding	Lce1a2	ENSMUST00000029530	protein_coding	principal1	3	-1	92670315	715
ENSMUSG00000062598	protein_coding	Vmn1r178	ENSMUST00000227993	protein_coding	principal1	7	1	23892009	2518
ENSMUSG00000005553	protein_coding	Atp4a	ENSMUST00000171014	nonsense_mediated_decay		7	1	30717832	564
ENSMUSG00000075410	protein_coding	Prcd	ENSMUST00000148484	protein_coding	principal1	11	1	116653534	934
ENSMUSG00000025351	protein_coding	Cd63	ENSMUST00000218450	processed_transcript		10	1	128910622	514
ENSMUSG00000020340	protein_coding	Cyfip2	ENSMUST00000165599	protein_coding	principal1	11	-1	46312358	6659
ENSMUSG00000086700	antisense	Gm15747	ENSMUST00000141216	antisense		5	-1	123397957	460
ENSMUSG00000020340	protein_coding	Cyfip2	ENSMUST00000093165	protein_coding	principal1	11	-1	46312859	6604
ENSMUSG00000062598	protein_coding	Vmn1r178	ENSMUST00000078593	protein_coding	principal1	7	1	23893529	915
ENSMUSG00000086700	antisense	Gm15747	ENSMUST00000151096	antisense		5	-1	123395064	524
ENSMUSG00000005553	protein_coding	Atp4a	ENSMUST00000165410	retained_intron		7	1	30722388	738
ENSMUSG00000046248	protein_coding	Krtap5-3	ENSMUST00000187512	protein_coding	principal2	7	1	142201364	1652
ENSMUSG00000046924	protein_coding	Vmn1r179	ENSMUST00000236851	nonsense_mediated_decay		7	1	23926978	7135
ENSMUSG00000042092	protein_coding	Lce1c	ENSMUST00000047055	protein_coding	principal1	3	1	92679247	724
ENSMUSG00000046924	protein_coding	Vmn1r179	ENSMUST00000049819	protein_coding	principal1	7	1	23928386	972
ENSMUSG00000026253	protein_coding	Chrng	ENSMUST00000185763	protein_coding		1	1	87204657	777
ENSMUSG00000046248	protein_coding	Krtap5-3	ENSMUST00000084414	protein_coding	alternative2	7	1	142201364	1074
ENSMUSG00000029830	protein_coding	Svopl	ENSMUST00000096040	protein_coding	principal1	6	-1	38046996	2366
ENSMUSG00000084328	processed_pseudogene	Gm14046	ENSMUST00000119389	processed_pseudogene		2	1	129749901	509
ENSMUSG00000037537	protein_coding	H2-M11	ENSMUST00000041964	protein_coding	principal1	17	1	36547075	1006
ENSMUSG00000025983	protein_coding	Ccdc150	ENSMUST00000161988	retained_intron		1	1	54250683	1204
ENSMUSG00000075410	protein_coding	Prcd	ENSMUST00000106381	processed_transcript		11	1	116653855	724
ENSMUSG00000073786	protein_coding	Gm7579	ENSMUST00000097943	protein_coding	principal1	7	1	142211859	732
ENSMUSG00000091421	processed_pseudogene	Gm4202	ENSMUST00000169025	processed_pseudogene		3	1	92689426	733
ENSMUSG00000075410	protein_coding	Prcd	ENSMUST00000156088	retained_intron		11	1	116657156	684
ENSMUSG00000031147	protein_coding	Magix	ENSMUST00000130287	processed_transcript		X	-1	7681251	2770
ENSMUSG00000048721	protein_coding	Fndc9	ENSMUST00000060185	protein_coding	principal1	11	1	46235531	2290
ENSMUSG00000109581	processed_pseudogene	Gm19094	ENSMUST00000209791	processed_pseudogene		7	1	142223521	1246
ENSMUSG00000025220	protein_coding	Oga	ENSMUST00000026243	protein_coding	principal1	19	-1	45783551	5057
ENSMUSG00000004319	protein_coding	Clcn3	ENSMUST00000129672	retained_intron		8	-1	60955233	8193
ENSMUSG00000075410	protein_coding	Prcd	ENSMUST00000116318	protein_coding	principal1	11	1	116657108	799
ENSMUSG00000081078	processed_pseudogene	Gm12568	ENSMUST00000117362	processed_pseudogene		11	-1	46244194	624
ENSMUSG00000068889	protein_coding	Lce1e	ENSMUST00000090867	protein_coding	principal1	3	-1	92709074	711
ENSMUSG00000026253	protein_coding	Chrng	ENSMUST00000188796	protein_coding		1	1	87205810	453
ENSMUSG00000091443	antisense	Gm17023	ENSMUST00000165885	antisense		8	1	13076077	448
ENSMUSG00000025220	protein_coding	Oga	ENSMUST00000235865	retained_intron		19	-1	45759292	3315
ENSMUSG00000106740	lincRNA	Gm21221	ENSMUST00000202876	lincRNA		5	-1	149811751	1073
ENSMUSG00000025220	protein_coding	Oga	ENSMUST00000235508	protein_coding		19	-1	45763234	2045
ENSMUSG00000075410	protein_coding	Prcd	ENSMUST00000178875	protein_coding		11	1	116653534	1227
ENSMUSG00000018168	protein_coding	Ikzf3	ENSMUST00000103141	protein_coding	principal1	11	-1	98545800	3658
ENSMUSG00000073785	protein_coding	Krtap5-5	ENSMUST00000097942	protein_coding	principal1	7	-1	142229971	1177
ENSMUSG00000025220	protein_coding	Oga	ENSMUST00000236960	processed_transcript		19	-1	45771886	2148
ENSMUSG00000029830	protein_coding	Svopl	ENSMUST00000172585	nonsense_mediated_decay		6	-1	38031089	1086
ENSMUSG00000018168	protein_coding	Ikzf3	ENSMUST00000140876	processed_transcript		11	-1	98489020	863
ENSMUSG00000061388	protein_coding	Csn1s2b	ENSMUST00000072539	protein_coding	principal3	5	1	87808082	810
ENSMUSG00000029830	protein_coding	Svopl	ENSMUST00000173428	retained_intron		6	-1	38023287	760
ENSMUSG00000042124	protein_coding	Lce1f	ENSMUST00000047153	protein_coding	principal1	3	-1	92720350	728
ENSMUSG00000110324	protein_coding	Gm40460	ENSMUST00000211591	protein_coding	principal1	7	-1	142241078	735
ENSMUSG00000025220	protein_coding	Oga	ENSMUST00000235936	retained_intron		19	-1	45783776	2812
ENSMUSG00000029830	protein_coding	Svopl	ENSMUST00000200796	retained_intron		6	-1	38018611	3492
ENSMUSG00000018168	protein_coding	Ikzf3	ENSMUST00000152400	retained_intron		11	-1	98546031	4607
ENSMUSG00000110254	unprocessed_pseudogene	Gm47762	ENSMUST00000211640	unprocessed_pseudogene		7	-1	142251538	717
ENSMUSG00000034083	protein_coding	Ccdc174	ENSMUST00000037783	protein_coding	principal1	6	1	91878053	1752
ENSMUSG00000018168	protein_coding	Ikzf3	ENSMUST00000153902	processed_transcript		11	-1	98477403	670
ENSMUSG00000061388	protein_coding	Csn1s2b	ENSMUST00000113279	protein_coding	alternative2	5	1	87808123	745
ENSMUSG00000030731	protein_coding	Syt3	ENSMUST00000118962	protein_coding	principal1	7	1	44384102	2494
ENSMUSG00000025220	protein_coding	Oga	ENSMUST00000235448	protein_coding		19	-1	45783837	457
ENSMUSG00000090455	unprocessed_pseudogene	Gm2431	ENSMUST00000171531	unprocessed_pseudogene		7	-1	142258354	519
ENSMUSG00000032869	protein_coding	Psmf1	ENSMUST00000042452	protein_coding	principal1	2	-1	151741310	3809
ENSMUSG00000008206	protein_coding	Cers4	ENSMUST00000177010	processed_transcript		8	1	4493026	561
ENSMUSG00000030731	protein_coding	Syt3	ENSMUST00000132399	processed_transcript		7	1	44384127	431
ENSMUSG00000087367	antisense	Gm15491	ENSMUST00000133963	antisense		19	1	45749508	751
ENSMUSG00000008206	protein_coding	Cers4	ENSMUST00000176042	protein_coding		8	1	4493140	387
ENSMUSG00000029830	protein_coding	Svopl	ENSMUST00000040486	retained_intron		6	-1	38046996	2930
ENSMUSG00000031147	protein_coding	Magix	ENSMUST00000115695	protein_coding	principal1	X	-1	7681089	1342
ENSMUSG00000061388	protein_coding	Csn1s2b	ENSMUST00000101057	protein_coding		5	1	87808124	1668
ENSMUSG00000107214	processed_transcript	4930500F04Rik	ENSMUST00000202177	lincRNA		5	1	149847747	576
ENSMUSG00000037221	protein_coding	Mospd3	ENSMUST00000111007	protein_coding	principal1	5	-1	137600708	1318
ENSMUSG00000031590	protein_coding	Frg1	ENSMUST00000033999	protein_coding	principal1	8	-1	41417074	1039
ENSMUSG00000061388	protein_coding	Csn1s2b	ENSMUST00000197301	protein_coding	alternative2	5	1	87808127	627
ENSMUSG00000107214	processed_transcript	4930500F04Rik	ENSMUST00000202156	lincRNA		5	1	149847965	251
ENSMUSG00000020810	protein_coding	Cygb	ENSMUST00000021166	protein_coding	principal1	11	-1	116654313	2331
ENSMUSG00000061388	protein_coding	Csn1s2b	ENSMUST00000200098	retained_intron		5	1	87811347	2063
ENSMUSG00000107214	processed_transcript	4930500F04Rik	ENSMUST00000200855	retained_intron		5	1	149852299	1779
ENSMUSG00000115007	bidirectional_promoter_lncRNA	5830448L01Rik	ENSMUST00000228874	bidirectional_promoter_lncRNA		14	-1	34673763	1299
ENSMUSG00000034083	protein_coding	Ccdc174	ENSMUST00000136090	nonsense_mediated_decay		6	1	91878053	4415
ENSMUSG00000031590	protein_coding	Frg1	ENSMUST00000210873	processed_transcript		8	-1	41412922	746
ENSMUSG00000074997	protein_coding	Pin1rt1	ENSMUST00000099659	protein_coding	principal1	2	-1	104716379	1172
ENSMUSG00000056885	protein_coding	Gm4559	ENSMUST00000080669	protein_coding	principal1	7	-1	142274363	600
ENSMUSG00000098149	processed_pseudogene	Gapdh-ps14	ENSMUST00000183246	processed_pseudogene		8	-1	41609669	1002
ENSMUSG00000032869	protein_coding	Psmf1	ENSMUST00000125977	retained_intron		2	-1	151720995	2956
ENSMUSG00000034083	protein_coding	Ccdc174	ENSMUST00000149546	retained_intron		6	1	91878072	370
ENSMUSG00000089731	unprocessed_pseudogene	Gm10013	ENSMUST00000106074	unprocessed_pseudogene		7	-1	142280939	672
ENSMUSG00000094568	processed_pseudogene	Smarce1-ps1	ENSMUST00000180067	processed_pseudogene		8	-1	41658669	1077
ENSMUSG00000034083	protein_coding	Ccdc174	ENSMUST00000139240	retained_intron		6	1	91878075	625
ENSMUSG00000030731	protein_coding	Syt3	ENSMUST00000118831	protein_coding	principal1	7	1	44384154	2627
ENSMUSG00000109936	lincRNA	Gm45889	ENSMUST00000209535	lincRNA		7	1	142283210	1057
ENSMUSG00000109936	lincRNA	Gm45889	ENSMUST00000211255	lincRNA		7	1	142283460	2358
ENSMUSG00000034083	protein_coding	Ccdc174	ENSMUST00000147188	retained_intron		6	1	91892347	827
ENSMUSG00000026253	protein_coding	Chrng	ENSMUST00000027470	protein_coding	principal1	1	1	87205811	2780
ENSMUSG00000034083	protein_coding	Ccdc174	ENSMUST00000151378	retained_intron		6	1	91892804	823
ENSMUSG00000066100	protein_coding	Krtap5-1	ENSMUST00000188274	protein_coding		7	-1	142297118	742
ENSMUSG00000026253	protein_coding	Chrng	ENSMUST00000186038	protein_coding		1	1	87205885	729
ENSMUSG00000006143	protein_coding	Upk3bl	ENSMUST00000139999	processed_transcript		5	1	136054492	677
ENSMUSG00000102046	lincRNA	2810404M03Rik	ENSMUST00000188324	lincRNA		8	1	41827267	1245
ENSMUSG00000066100	protein_coding	Krtap5-1	ENSMUST00000084413	protein_coding	principal1	7	-1	142297069	588
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000064709	protein_coding	principal2	17	1	29268788	2812
ENSMUSG00000032869	protein_coding	Psmf1	ENSMUST00000155939	nonsense_mediated_decay		2	-1	151741293	3306
ENSMUSG00000030731	protein_coding	Syt3	ENSMUST00000130707	protein_coding		7	1	44384604	442
ENSMUSG00000108069	processed_pseudogene	Hspd1-ps1	ENSMUST00000203513	processed_pseudogene		8	1	41923520	1670
ENSMUSG00000030731	protein_coding	Syt3	ENSMUST00000130844	protein_coding		7	1	44384604	539
ENSMUSG00000004319	protein_coding	Clcn3	ENSMUST00000004430	protein_coding	alternative1	8	-1	60983239	4175
ENSMUSG00000026253	protein_coding	Chrng	ENSMUST00000189392	retained_intron		1	1	87206074	1505
ENSMUSG00000030731	protein_coding	Syt3	ENSMUST00000120262	protein_coding	principal1	7	1	44384868	2096
ENSMUSG00000107279	lincRNA	Gm43450	ENSMUST00000202611	lincRNA		5	-1	149871409	632
ENSMUSG00000056209	protein_coding	Npm3	ENSMUST00000070215	protein_coding	principal1	19	-1	45749591	888
ENSMUSG00000042747	protein_coding	Krtcap2	ENSMUST00000126691	retained_intron		3	1	89245966	834
ENSMUSG00000091410	processed_pseudogene	Gm17150	ENSMUST00000165577	processed_pseudogene		19	1	58790195	381
ENSMUSG00000107093	lincRNA	Gm43452	ENSMUST00000201873	lincRNA		5	-1	149896119	991
ENSMUSG00000108719	TEC	Gm44757	ENSMUST00000206373	TEC		7	1	44314751	157
ENSMUSG00000037221	protein_coding	Mospd3	ENSMUST00000037620	protein_coding	principal1	5	-1	137601044	1456
ENSMUSG00000056209	protein_coding	Npm3	ENSMUST00000144165	retained_intron		19	-1	45749549	710
ENSMUSG00000032869	protein_coding	Psmf1	ENSMUST00000109869	protein_coding	principal1	2	-1	151744186	1384
ENSMUSG00000108491	processed_pseudogene	Gm44523	ENSMUST00000205616	processed_pseudogene		7	-1	42509334	417
ENSMUSG00000004319	protein_coding	Clcn3	ENSMUST00000110301	protein_coding	alternative1	8	-1	60983239	4099
ENSMUSG00000038542	protein_coding	Pcid2	ENSMUST00000168164	nonsense_mediated_decay		8	-1	13105459	2678
ENSMUSG00000032869	protein_coding	Psmf1	ENSMUST00000151656	retained_intron		2	-1	151729960	683
ENSMUSG00000004319	protein_coding	Clcn3	ENSMUST00000132234	retained_intron		8	-1	60954779	3480
ENSMUSG00000037221	protein_coding	Mospd3	ENSMUST00000126904	processed_transcript		5	-1	137600800	514
ENSMUSG00000032869	protein_coding	Psmf1	ENSMUST00000123449	retained_intron		2	-1	151741293	2667
ENSMUSG00000025936	transcribed_unprocessed_pseudogene	Gm4956	ENSMUST00000082032	processed_transcript		1	-1	21298312	1148
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000137846	protein_coding		4	-1	132003794	4531
ENSMUSG00000037221	protein_coding	Mospd3	ENSMUST00000154708	protein_coding		5	-1	137601058	663
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000173124	processed_transcript		17	-1	35029868	538
ENSMUSG00000037221	protein_coding	Mospd3	ENSMUST00000133705	protein_coding		5	-1	137600724	349
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000054917	protein_coding	alternative2	4	-1	132007437	4948
ENSMUSG00000004319	protein_coding	Clcn3	ENSMUST00000147824	retained_intron		8	-1	60983244	3034
ENSMUSG00000037221	protein_coding	Mospd3	ENSMUST00000196366	retained_intron		5	-1	137600691	609
ENSMUSG00000004319	protein_coding	Clcn3	ENSMUST00000145493	retained_intron		8	-1	60983286	3462
ENSMUSG00000036040	protein_coding	Adamtsl2	ENSMUST00000091233	protein_coding	principal1	2	1	27079379	3612
ENSMUSG00000025936	transcribed_unprocessed_pseudogene	Gm4956	ENSMUST00000178869	transcribed_unprocessed_pseudogene		1	-1	21298127	672
ENSMUSG00000112379	lincRNA	Gm47900	ENSMUST00000218961	lincRNA		10	1	66837597	1603
ENSMUSG00000108908	protein_coding	Olfr1293-ps	ENSMUST00000217845	protein_coding	principal5	2	1	111525203	3628
ENSMUSG00000003665	protein_coding	Has1	ENSMUST00000003762	protein_coding	principal1	17	-1	17855188	2095
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234711	protein_coding	principal2	17	1	29268825	13859
ENSMUSG00000112267	lincRNA	Gm47903	ENSMUST00000217953	lincRNA		10	-1	66891612	1007
ENSMUSG00000108908	protein_coding	Olfr1293-ps	ENSMUST00000215245	nonsense_mediated_decay		2	1	111525203	1219
ENSMUSG00000108908	protein_coding	Olfr1293-ps	ENSMUST00000102551	protein_coding	alternative2	2	1	111527316	888
ENSMUSG00000025936	transcribed_unprocessed_pseudogene	Gm4956	ENSMUST00000179730	processed_transcript		1	-1	21298247	609
ENSMUSG00000109287	unprocessed_pseudogene	Gm44713	ENSMUST00000208680	unprocessed_pseudogene		2	1	111528414	125
ENSMUSG00000000753	protein_coding	Serpinf1	ENSMUST00000000769	protein_coding	principal1	11	-1	75422701	1832
ENSMUSG00000003665	protein_coding	Has1	ENSMUST00000232410	retained_intron		17	-1	17855205	3541
ENSMUSG00000097134	lincRNA	1110002J07Rik	ENSMUST00000181710	lincRNA		10	-1	66920258	2229
ENSMUSG00000115508	lincRNA	Gm49786	ENSMUST00000228534	lincRNA		15	1	39040432	851
ENSMUSG00000115841	processed_pseudogene	Gm49105	ENSMUST00000228042	processed_pseudogene		15	1	39061406	399
ENSMUSG00000097134	lincRNA	1110002J07Rik	ENSMUST00000219021	lincRNA		10	-1	66917739	388
ENSMUSG00000008028	protein_coding	1700008O03Rik	ENSMUST00000107933	protein_coding	principal1	7	-1	44375030	913
ENSMUSG00000000753	protein_coding	Serpinf1	ENSMUST00000168902	nonsense_mediated_decay		11	-1	75417996	976
ENSMUSG00000037885	protein_coding	Stk35	ENSMUST00000165413	protein_coding	principal1	2	1	129800517	2882
ENSMUSG00000000753	protein_coding	Serpinf1	ENSMUST00000167281	nonsense_mediated_decay		11	-1	75415730	882
ENSMUSG00000036040	protein_coding	Adamtsl2	ENSMUST00000169787	retained_intron		2	1	27097296	5956
ENSMUSG00000000753	protein_coding	Serpinf1	ENSMUST00000138661	protein_coding		11	-1	75422586	718
ENSMUSG00000070425	protein_coding	Xntrpc	ENSMUST00000123372	nonsense_mediated_decay		7	1	102065713	4847
ENSMUSG00000036040	protein_coding	Adamtsl2	ENSMUST00000143246	processed_transcript		2	1	27098043	350
ENSMUSG00000000753	protein_coding	Serpinf1	ENSMUST00000139403	retained_intron		11	-1	75415195	352
ENSMUSG00000008028	protein_coding	1700008O03Rik	ENSMUST00000137946	retained_intron		7	-1	44374514	973
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000105974	protein_coding		4	-1	132007438	4844
ENSMUSG00000036040	protein_coding	Adamtsl2	ENSMUST00000130600	retained_intron		2	1	27103786	442
ENSMUSG00000000753	protein_coding	Serpinf1	ENSMUST00000137103	protein_coding		11	-1	75422555	757
ENSMUSG00000008028	protein_coding	1700008O03Rik	ENSMUST00000150886	protein_coding		7	-1	44373600	820
ENSMUSG00000040170	protein_coding	Fmo2	ENSMUST00000045902	protein_coding	principal1	1	-1	162898712	4066
ENSMUSG00000037885	protein_coding	Stk35	ENSMUST00000166282	protein_coding		2	1	129800517	5445
ENSMUSG00000036040	protein_coding	Adamtsl2	ENSMUST00000139633	retained_intron		2	1	27104663	1069
ENSMUSG00000008028	protein_coding	1700008O03Rik	ENSMUST00000150034	processed_transcript		7	-1	44385684	409
ENSMUSG00000000753	protein_coding	Serpinf1	ENSMUST00000125982	protein_coding		11	-1	75422552	605
ENSMUSG00000008028	protein_coding	1700008O03Rik	ENSMUST00000134535	processed_transcript		7	-1	44385820	2245
ENSMUSG00000000753	protein_coding	Serpinf1	ENSMUST00000155009	protein_coding		11	-1	75418297	502
ENSMUSG00000117685	lincRNA	Gm50299	ENSMUST00000238019	lincRNA		19	-1	23748001	669
ENSMUSG00000108509	antisense	Gm44780	ENSMUST00000205409	antisense		7	1	44362564	581
ENSMUSG00000108372	TEC	Gm45124	ENSMUST00000206723	TEC		7	1	44386400	2755
ENSMUSG00000040170	protein_coding	Fmo2	ENSMUST00000194061	retained_intron		1	-1	162886515	3594
ENSMUSG00000038342	protein_coding	Mlxip	ENSMUST00000111596	protein_coding		5	1	123394798	2653
ENSMUSG00000097265	lincRNA	Gm26803	ENSMUST00000181705	lincRNA		13	-1	83729582	2011
ENSMUSG00000026931	protein_coding	1700019N19Rik	ENSMUST00000028299	protein_coding	principal2	19	-1	58794461	970
ENSMUSG00000042747	protein_coding	Krtcap2	ENSMUST00000040888	protein_coding	principal1	3	1	89245966	1172
ENSMUSG00000040170	protein_coding	Fmo2	ENSMUST00000111510	protein_coding	principal1	1	-1	162898665	2260
ENSMUSG00000102969	TEC	Gm33366	ENSMUST00000195583	TEC		13	-1	83738535	3827
ENSMUSG00000070425	protein_coding	Xntrpc	ENSMUST00000084843	protein_coding	principal1	7	1	102065778	4173
ENSMUSG00000006342	protein_coding	Susd2	ENSMUST00000095541	protein_coding	principal1	10	-1	75643991	3151
ENSMUSG00000114687	processed_pseudogene	Gm5452	ENSMUST00000225105	processed_pseudogene		13	1	83832340	997
ENSMUSG00000040170	protein_coding	Fmo2	ENSMUST00000194197	processed_transcript		1	-1	162880731	203
ENSMUSG00000026931	protein_coding	1700019N19Rik	ENSMUST00000166692	protein_coding	alternative2	19	-1	58793283	983
ENSMUSG00000053846	protein_coding	Lipg	ENSMUST00000066532	protein_coding	principal1	18	-1	74961263	3787
ENSMUSG00000040170	protein_coding	Fmo2	ENSMUST00000143123	protein_coding		1	-1	162898484	581
ENSMUSG00000006143	protein_coding	Upk3bl	ENSMUST00000111137	protein_coding	alternative2	5	1	136057191	1119
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000105970	protein_coding	alternative2	4	-1	132075292	5059
ENSMUSG00000040170	protein_coding	Fmo2	ENSMUST00000156860	retained_intron		1	-1	162898726	1000
ENSMUSG00000059288	protein_coding	Cdyl	ENSMUST00000075220	protein_coding		13	1	35659833	3470
ENSMUSG00000040170	protein_coding	Fmo2	ENSMUST00000147617	retained_intron		1	-1	162898720	680
ENSMUSG00000053846	protein_coding	Lipg	ENSMUST00000235783	retained_intron		18	-1	74961262	2592
ENSMUSG00000059288	protein_coding	Cdyl	ENSMUST00000225602	nonsense_mediated_decay		13	1	35659927	643
ENSMUSG00000050334	lincRNA	C130071C03Rik	ENSMUST00000131907	lincRNA		13	1	83721381	3590
ENSMUSG00000092332	unprocessed_pseudogene	Gm8868	ENSMUST00000173591	unprocessed_pseudogene		17	1	36558621	577
ENSMUSG00000050334	lincRNA	C130071C03Rik	ENSMUST00000185281	lincRNA		13	1	83721381	476
ENSMUSG00000092606	unprocessed_pseudogene	Gm20450	ENSMUST00000173652	unprocessed_pseudogene		17	1	36597898	147
ENSMUSG00000070425	protein_coding	Xntrpc	ENSMUST00000155078	nonsense_mediated_decay		7	1	102075876	3691
ENSMUSG00000006143	protein_coding	Upk3bl	ENSMUST00000156530	protein_coding		5	1	136057267	1035
ENSMUSG00000108446	processed_transcript	Gm44997	ENSMUST00000205970	lincRNA		7	-1	42578235	425
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000105975	protein_coding	alternative2	4	-1	132075292	5235
ENSMUSG00000050334	lincRNA	C130071C03Rik	ENSMUST00000182788	lincRNA		13	1	83728106	1368
ENSMUSG00000042747	protein_coding	Krtcap2	ENSMUST00000168900	protein_coding		3	1	89246434	582
ENSMUSG00000108446	processed_transcript	Gm44997	ENSMUST00000205775	TEC		7	-1	42576755	3535
ENSMUSG00000006143	protein_coding	Upk3bl	ENSMUST00000139549	processed_transcript		5	1	136060048	671
ENSMUSG00000070425	protein_coding	Xntrpc	ENSMUST00000139104	nonsense_mediated_decay		7	1	102075880	4505
ENSMUSG00000050334	lincRNA	C130071C03Rik	ENSMUST00000182701	lincRNA		13	1	83732566	1128
ENSMUSG00000094845	protein_coding	Tmem95	ENSMUST00000178597	protein_coding	principal1	11	-1	69878053	1193
ENSMUSG00000006143	protein_coding	Upk3bl	ENSMUST00000122979	nonsense_mediated_decay		5	1	136060121	695
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234631	nonsense_mediated_decay		17	1	29268830	1745
ENSMUSG00000050334	lincRNA	C130071C03Rik	ENSMUST00000187663	lincRNA		13	1	83738863	837
ENSMUSG00000025983	protein_coding	Ccdc150	ENSMUST00000027128	protein_coding	principal2	1	1	54250683	3807
ENSMUSG00000114588	processed_pseudogene	Gm6411	ENSMUST00000226098	processed_pseudogene		13	-1	83762335	1204
ENSMUSG00000092335	protein_coding	Zfp977	ENSMUST00000173283	protein_coding	principal1	7	-1	42592547	1425
ENSMUSG00000042747	protein_coding	Krtcap2	ENSMUST00000132818	retained_intron		3	1	89248867	426
ENSMUSG00000015656	protein_coding	Hspa8	ENSMUST00000015800	protein_coding	principal1	9	1	40800984	2394
ENSMUSG00000059288	protein_coding	Cdyl	ENSMUST00000163595	protein_coding	principal1	13	1	35741313	3575
ENSMUSG00000006143	protein_coding	Upk3bl	ENSMUST00000006303	protein_coding	principal2	5	1	136057267	1045
ENSMUSG00000074158	protein_coding	Zfp976	ENSMUST00000107994	processed_transcript		7	-1	42642588	4868
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234845	protein_coding		17	1	29268916	811
ENSMUSG00000059288	protein_coding	Cdyl	ENSMUST00000226071	processed_transcript		13	1	35762812	368
ENSMUSG00000116911	processed_pseudogene	Gm5964	ENSMUST00000232485	processed_pseudogene		16	-1	44849796	1004
ENSMUSG00000114661	lincRNA	Gm48707	ENSMUST00000224356	lincRNA		13	-1	35615002	356
ENSMUSG00000114661	lincRNA	Gm48707	ENSMUST00000224539	lincRNA		13	-1	35616873	547
ENSMUSG00000114661	lincRNA	Gm48707	ENSMUST00000225886	lincRNA		13	-1	35660777	950
ENSMUSG00000074158	protein_coding	Zfp976	ENSMUST00000098503	protein_coding	principal1	7	-1	42642547	1976
ENSMUSG00000074158	protein_coding	Zfp976	ENSMUST00000187616	protein_coding		7	-1	42616359	1908
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234054	processed_transcript		17	1	29268925	477
ENSMUSG00000114373	antisense	Gm48708	ENSMUST00000224745	antisense		13	-1	35776896	1167
ENSMUSG00000046731	protein_coding	Kctd11	ENSMUST00000050555	protein_coding		11	-1	69881406	3146
ENSMUSG00000006342	protein_coding	Susd2	ENSMUST00000218896	retained_intron		10	-1	75644008	3348
ENSMUSG00000114555	TEC	Gm48706	ENSMUST00000224988	TEC		13	1	35798750	3387
ENSMUSG00000006342	protein_coding	Susd2	ENSMUST00000219733	retained_intron		10	-1	75644008	3433
ENSMUSG00000046731	protein_coding	Kctd11	ENSMUST00000238978	protein_coding	principal1	11	-1	69880985	2721
ENSMUSG00000015656	protein_coding	Hspa8	ENSMUST00000149936	retained_intron		9	1	40801276	3158
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000146021	protein_coding	alternative2	4	-1	132075321	5074
ENSMUSG00000025983	protein_coding	Ccdc150	ENSMUST00000160472	nonsense_mediated_decay		1	1	54250722	3696
ENSMUSG00000015656	protein_coding	Hspa8	ENSMUST00000153847	processed_transcript		9	1	40801279	727
ENSMUSG00000006342	protein_coding	Susd2	ENSMUST00000077610	protein_coding		10	-1	75643980	2275
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000235114	nonsense_mediated_decay		17	1	29268945	1073
ENSMUSG00000015656	protein_coding	Hspa8	ENSMUST00000140984	retained_intron		9	1	40801287	1152
ENSMUSG00000025983	protein_coding	Ccdc150	ENSMUST00000163072	protein_coding	alternative2	1	1	54329992	2106
ENSMUSG00000008475	protein_coding	Arpc5	ENSMUST00000077755	protein_coding	principal1	1	1	152766542	1914
ENSMUSG00000114032	processed_pseudogene	Gm2139	ENSMUST00000222569	processed_pseudogene		12	-1	90588645	1075
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000235038	protein_coding		17	1	29268948	921
ENSMUSG00000015656	protein_coding	Hspa8	ENSMUST00000138895	retained_intron		9	1	40801289	920
ENSMUSG00000034063	protein_coding	4930590J08Rik	ENSMUST00000205974	retained_intron		6	1	91902809	1904
ENSMUSG00000038542	protein_coding	Pcid2	ENSMUST00000164416	protein_coding	principal1	8	-1	13105459	2860
ENSMUSG00000008475	protein_coding	Arpc5	ENSMUST00000097536	protein_coding		1	1	152766542	1737
ENSMUSG00000101111	unprocessed_pseudogene	Gm28437	ENSMUST00000190277	unprocessed_pseudogene		1	-1	24613971	783
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000235050	protein_coding	alternative2	17	1	29268953	773
ENSMUSG00000025983	protein_coding	Ccdc150	ENSMUST00000159682	retained_intron		1	1	54354596	1886
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000120346	protein_coding	alternative2	17	1	29268961	1148
ENSMUSG00000015656	protein_coding	Hspa8	ENSMUST00000117870	processed_transcript		9	1	40801302	598
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234028	nonsense_mediated_decay		17	1	29268961	1270
ENSMUSG00000054474	protein_coding	Thnsl2	ENSMUST00000160918	protein_coding	principal1	6	-1	71144439	2077
ENSMUSG00000015656	protein_coding	Hspa8	ENSMUST00000117557	protein_coding		9	1	40801302	2019
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234377	protein_coding	alternative2	17	1	29268961	2756
ENSMUSG00000034336	protein_coding	Ina	ENSMUST00000037636	protein_coding	principal1	19	1	47014698	3240
ENSMUSG00000008475	protein_coding	Arpc5	ENSMUST00000143008	retained_intron		1	1	152768499	748
ENSMUSG00000063672	protein_coding	Nkx6-3	ENSMUST00000071588	protein_coding	principal1	8	1	23153269	2238
ENSMUSG00000015656	protein_coding	Hspa8	ENSMUST00000133964	protein_coding		9	1	40801461	514
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234012	nonsense_mediated_decay		17	1	29268967	930
ENSMUSG00000103084	protein_coding	Gm38119	ENSMUST00000192027	protein_coding	principal1	3	-1	92739096	755
ENSMUSG00000015656	protein_coding	Hspa8	ENSMUST00000127699	retained_intron		9	1	40802342	456
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000156215	retained_intron		17	1	29268974	3230
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000235074	protein_coding		17	1	29268980	814
ENSMUSG00000015656	protein_coding	Hspa8	ENSMUST00000215526	processed_transcript		9	1	40804484	357
ENSMUSG00000045639	protein_coding	Zfp629	ENSMUST00000058038	protein_coding	principal1	7	-1	127614433	6120
ENSMUSG00000110982	TEC	Gm48565	ENSMUST00000215895	TEC		9	1	40820969	1705
ENSMUSG00000054474	protein_coding	Thnsl2	ENSMUST00000074241	protein_coding	principal1	6	-1	71144347	1821
ENSMUSG00000038542	protein_coding	Pcid2	ENSMUST00000165097	processed_transcript		8	-1	13086683	558
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000235040	protein_coding		17	1	29268981	685
ENSMUSG00000045639	protein_coding	Zfp629	ENSMUST00000122066	protein_coding	principal1	7	-1	127615215	5850
ENSMUSG00000021678	protein_coding	F2rl1	ENSMUST00000022185	protein_coding	principal1	13	-1	95525227	2741
ENSMUSG00000100200	protein_coding	H2al1m	ENSMUST00000073949	protein_coding	principal1	X	1	9283764	535
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234256	protein_coding	principal2	17	1	29269042	1694
ENSMUSG00000038542	protein_coding	Pcid2	ENSMUST00000166881	processed_transcript		8	-1	13104831	374
ENSMUSG00000008206	protein_coding	Cers4	ENSMUST00000008350	protein_coding	principal1	8	1	4493199	9475
ENSMUSG00000045639	protein_coding	Zfp629	ENSMUST00000084564	protein_coding	principal1	7	-1	127615272	5829
ENSMUSG00000034063	protein_coding	4930590J08Rik	ENSMUST00000205686	protein_coding	principal1	6	1	91904233	3395
ENSMUSG00000058331	protein_coding	Zfp85	ENSMUST00000144183	protein_coding	principal1	13	-1	67755228	2312
ENSMUSG00000038542	protein_coding	Pcid2	ENSMUST00000167198	nonsense_mediated_decay		8	-1	13098607	627
ENSMUSG00000054474	protein_coding	Thnsl2	ENSMUST00000170753	protein_coding		6	-1	71131972	477
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234459	protein_coding		17	1	29269050	804
ENSMUSG00000047094	protein_coding	Ofcc1	ENSMUST00000054635	protein_coding	principal1	13	-1	40288011	2816
ENSMUSG00000038542	protein_coding	Pcid2	ENSMUST00000172443	nonsense_mediated_decay		8	-1	13104821	541
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234773	protein_coding	principal2	17	1	29269723	1367
ENSMUSG00000045639	protein_coding	Zfp629	ENSMUST00000151107	protein_coding		7	-1	127614867	583
ENSMUSG00000091784	processed_pseudogene	Gm17022	ENSMUST00000166415	processed_pseudogene		8	1	13086509	922
ENSMUSG00000045639	protein_coding	Zfp629	ENSMUST00000134446	protein_coding		7	-1	127615258	670
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234820	nonsense_mediated_decay		17	1	29273384	940
ENSMUSG00000034063	protein_coding	4930590J08Rik	ENSMUST00000205569	protein_coding		6	1	91944264	251
ENSMUSG00000045639	protein_coding	Zfp629	ENSMUST00000132524	protein_coding		7	-1	127615797	215
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000235023	protein_coding	principal2	17	1	29273391	1285
ENSMUSG00000054474	protein_coding	Thnsl2	ENSMUST00000170455	processed_transcript		6	-1	71144331	796
ENSMUSG00000034063	protein_coding	4930590J08Rik	ENSMUST00000059318	protein_coding	principal1	6	1	91914759	2802
ENSMUSG00000058331	protein_coding	Zfp85	ENSMUST00000091520	nonsense_mediated_decay		13	-1	67755146	595
ENSMUSG00000045639	protein_coding	Zfp629	ENSMUST00000131318	protein_coding		7	-1	127614360	850
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000144754	processed_transcript		4	-1	132072097	5946
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000149405	protein_coding	principal2	17	1	29274075	1435
ENSMUSG00000108625	TEC	Gm44711	ENSMUST00000205414	TEC		6	-1	91939513	1264
ENSMUSG00000095057	processed_pseudogene	Zfp353-ps	ENSMUST00000107130	processed_pseudogene		8	-1	42083109	1650
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234326	protein_coding	alternative2	17	1	29274145	1312
ENSMUSG00000045639	protein_coding	Zfp629	ENSMUST00000128731	protein_coding		7	-1	127615200	823
ENSMUSG00000044081	processed_transcript	Zfp85os	ENSMUST00000143812	antisense		13	1	67729262	1784
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000105972	protein_coding	principal3	4	-1	132007431	2577
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000235117	protein_coding	alternative2	17	1	29274154	1227
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234234	protein_coding		17	1	29274195	697
ENSMUSG00000053038	processed_pseudogene	Gm6180	ENSMUST00000065243	processed_pseudogene		8	1	42246911	498
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000234714	protein_coding		17	1	29276682	1396
ENSMUSG00000045639	protein_coding	Zfp629	ENSMUST00000152315	protein_coding		7	-1	127614365	760
ENSMUSG00000047094	protein_coding	Ofcc1	ENSMUST00000224909	nonsense_mediated_decay		13	-1	40288011	2739
ENSMUSG00000052712	protein_coding	BC004004	ENSMUST00000150874	retained_intron		17	1	29298284	652
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000212761	protein_coding		4	-1	131991286	8302
ENSMUSG00000026457	protein_coding	Adipor1	ENSMUST00000027727	protein_coding	principal1	1	1	134415378	3123
ENSMUSG00000108206	lincRNA	Gm44427	ENSMUST00000204123	lincRNA		6	1	71164799	456
ENSMUSG00000015342	protein_coding	Xk	ENSMUST00000015486	protein_coding	principal1	X	1	9272756	5076
ENSMUSG00000044081	processed_transcript	Zfp85os	ENSMUST00000049518	antisense		13	1	67744204	2624
ENSMUSG00000109987	processed_pseudogene	Gm18414	ENSMUST00000210858	processed_pseudogene		8	1	42769434	694
ENSMUSG00000047094	protein_coding	Ofcc1	ENSMUST00000224813	protein_coding		13	-1	40361450	1043
ENSMUSG00000044081	processed_transcript	Zfp85os	ENSMUST00000181158	retained_intron		13	1	67752275	1530
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000141291	protein_coding		4	-1	132049091	2832
ENSMUSG00000109627	processed_pseudogene	Gm45590	ENSMUST00000209715	processed_pseudogene		8	1	43085587	262
ENSMUSG00000114248	processed_pseudogene	Gm8352	ENSMUST00000226074	processed_pseudogene		13	1	40496188	1286
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000238852	retained_intron		4	-1	132049091	2375
ENSMUSG00000100362	processed_pseudogene	Gm1833	ENSMUST00000191608	processed_pseudogene		1	1	96645420	682
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000136761	processed_transcript		4	-1	132000304	607
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000131953	processed_transcript		4	-1	132075264	644
ENSMUSG00000038342	protein_coding	Mlxip	ENSMUST00000068237	protein_coding	principal1	5	1	123394800	7303
ENSMUSG00000100589	lincRNA	4930533P14Rik	ENSMUST00000189056	lincRNA		1	-1	96662573	583
ENSMUSG00000038342	protein_coding	Mlxip	ENSMUST00000135961	nonsense_mediated_decay		5	1	123446039	5510
ENSMUSG00000115062	antisense	4930544F09Rik	ENSMUST00000226216	antisense		15	1	58984136	1724
ENSMUSG00000109547	protein_coding	Olfr1294	ENSMUST00000208675	protein_coding	principal1	2	-1	111540291	1983
ENSMUSG00000066196	protein_coding	Spag8	ENSMUST00000149575	protein_coding		4	-1	43652159	523
ENSMUSG00000026457	protein_coding	Adipor1	ENSMUST00000112237	protein_coding	principal1	1	1	134415456	3446
ENSMUSG00000038342	protein_coding	Mlxip	ENSMUST00000199458	processed_transcript		5	1	123451458	405
ENSMUSG00000109547	protein_coding	Olfr1294	ENSMUST00000208334	protein_coding	principal1	2	-1	111538290	942
ENSMUSG00000007682	protein_coding	Dio2	ENSMUST00000082432	protein_coding	principal1	12	-1	90738438	5815
ENSMUSG00000027919	protein_coding	Lce1g	ENSMUST00000029527	protein_coding	principal1	3	-1	92752338	925
ENSMUSG00000009216	protein_coding	Fam163b	ENSMUST00000151224	protein_coding	principal1	2	-1	27142491	2959
ENSMUSG00000026457	protein_coding	Adipor1	ENSMUST00000156433	processed_transcript		1	1	134415471	363
ENSMUSG00000100255	lincRNA	Gm28196	ENSMUST00000187719	lincRNA		2	1	129948568	640
ENSMUSG00000026457	protein_coding	Adipor1	ENSMUST00000148822	retained_intron		1	1	134415564	2231
ENSMUSG00000114215	processed_pseudogene	Gm47038	ENSMUST00000223887	processed_pseudogene		13	1	40533570	378
ENSMUSG00000033732	protein_coding	Sf3b3	ENSMUST00000042012	protein_coding	principal1	8	-1	110846776	4525
ENSMUSG00000114198	lincRNA	Gm47039	ENSMUST00000223618	lincRNA		13	-1	40606479	239
ENSMUSG00000083670	processed_pseudogene	Gm6829	ENSMUST00000119858	processed_pseudogene		X	-1	9328108	360
ENSMUSG00000008206	protein_coding	Cers4	ENSMUST00000176267	retained_intron		8	1	4493449	3369
ENSMUSG00000054422	protein_coding	Fabp1	ENSMUST00000067492	protein_coding	principal1	6	1	71199827	553
ENSMUSG00000114322	TEC	Gm47041	ENSMUST00000225346	TEC		13	-1	40644649	2043
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000105981	protein_coding	principal3	4	-1	132049078	5303
ENSMUSG00000045236	protein_coding	Krtap5-4	ENSMUST00000061403	protein_coding	principal1	7	1	142303549	1046
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000084253	protein_coding	alternative2	4	-1	132049078	5141
ENSMUSG00000008206	protein_coding	Cers4	ENSMUST00000175781	retained_intron		8	1	4493453	2539
ENSMUSG00000028414	protein_coding	Fktn	ENSMUST00000128667	protein_coding	principal1	4	1	53713998	6080
ENSMUSG00000028906	protein_coding	Epb41	ENSMUST00000030739	protein_coding	principal3	4	-1	132072097	6565
ENSMUSG00000008206	protein_coding	Cers4	ENSMUST00000176837	retained_intron		8	1	4493458	3116
ENSMUSG00000107112	processed_transcript	Gm36241	ENSMUST00000201085	lincRNA		5	1	149903197	493
ENSMUSG00000008206	protein_coding	Cers4	ENSMUST00000176932	retained_intron		8	1	4493482	3674
ENSMUSG00000085008	antisense	Dbhos	ENSMUST00000150024	antisense		2	-1	27162703	4020
ENSMUSG00000049593	protein_coding	Lce1h	ENSMUST00000051521	protein_coding	principal1	3	-1	92765065	706
ENSMUSG00000107112	processed_transcript	Gm36241	ENSMUST00000201713	retained_intron		5	1	149910252	657
ENSMUSG00000097157	bidirectional_promoter_lncRNA	Gm26512	ENSMUST00000181874	bidirectional_promoter_lncRNA		12	1	90738201	3042
ENSMUSG00000008206	protein_coding	Cers4	ENSMUST00000176705	retained_intron		8	1	4493521	908
ENSMUSG00000083812	processed_pseudogene	Gm5054	ENSMUST00000119351	processed_pseudogene		7	-1	142306294	453
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000041565	protein_coding	principal1	5	-1	31291107	5403
ENSMUSG00000008206	protein_coding	Cers4	ENSMUST00000176130	nonsense_mediated_decay		8	1	4493576	874
ENSMUSG00000100254	protein_coding	Trpc2	ENSMUST00000124189	protein_coding	principal1	7	1	102083116	2874
ENSMUSG00000033732	protein_coding	Sf3b3	ENSMUST00000212515	retained_intron		8	-1	110846787	2957
ENSMUSG00000031444	protein_coding	F10	ENSMUST00000063820	protein_coding	principal3	8	1	13037308	2503
ENSMUSG00000097157	bidirectional_promoter_lncRNA	Gm26512	ENSMUST00000221942	bidirectional_promoter_lncRNA		12	1	90738219	582
ENSMUSG00000107056	processed_pseudogene	Gm21048	ENSMUST00000202470	processed_pseudogene		5	-1	150003314	1166
ENSMUSG00000033732	protein_coding	Sf3b3	ENSMUST00000212182	retained_intron		8	-1	110838596	826
ENSMUSG00000102201	TEC	Gm36956	ENSMUST00000193830	TEC		8	-1	4522125	214
ENSMUSG00000097157	bidirectional_promoter_lncRNA	Gm26512	ENSMUST00000220857	bidirectional_promoter_lncRNA		12	1	90744905	715
ENSMUSG00000033732	protein_coding	Sf3b3	ENSMUST00000212613	retained_intron		8	-1	110845057	4490
ENSMUSG00000033732	protein_coding	Sf3b3	ENSMUST00000212843	retained_intron		8	-1	110846727	1409
ENSMUSG00000068888	protein_coding	Lce1i	ENSMUST00000090866	protein_coding	principal1	3	-1	92778899	731
ENSMUSG00000097673	lincRNA	Gm26608	ENSMUST00000180740	lincRNA		5	-1	28071105	1954
ENSMUSG00000066196	protein_coding	Spag8	ENSMUST00000084646	protein_coding	alternative2	4	-1	43653552	1549
ENSMUSG00000097071	lincRNA	4930544I03Rik	ENSMUST00000181184	lincRNA		12	-1	90969768	1276
ENSMUSG00000097071	lincRNA	4930544I03Rik	ENSMUST00000220451	lincRNA		12	-1	90969798	320
ENSMUSG00000097673	lincRNA	Gm26608	ENSMUST00000181503	lincRNA		5	-1	28055459	1362
ENSMUSG00000107378	processed_pseudogene	Gm18995	ENSMUST00000202981	processed_pseudogene		6	1	127167575	520
ENSMUSG00000113806	processed_pseudogene	Gm47688	ENSMUST00000221621	processed_pseudogene		12	-1	90938382	148
ENSMUSG00000106030	TEC	Gm43611	ENSMUST00000196656	TEC		5	-1	28036406	4352
ENSMUSG00000028414	protein_coding	Fktn	ENSMUST00000107638	nonsense_mediated_decay		4	1	53714163	3326
ENSMUSG00000107379	antisense	Gm43126	ENSMUST00000201546	antisense		6	1	127122966	429
ENSMUSG00000100862	unprocessed_pseudogene	Gm10925	ENSMUST00000189941	unprocessed_pseudogene		1	-1	24614651	678
ENSMUSG00000031444	protein_coding	F10	ENSMUST00000033821	protein_coding	alternative2	8	1	13037322	1903
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000201426	retained_intron		5	-1	31254653	742
ENSMUSG00000028414	protein_coding	Fktn	ENSMUST00000222290	nonsense_mediated_decay		4	1	53714163	3123
ENSMUSG00000081531	unprocessed_pseudogene	Vmn1r-ps113	ENSMUST00000121318	unprocessed_pseudogene		13	-1	22738093	1106
ENSMUSG00000097166	antisense	9330179D12Rik	ENSMUST00000180811	antisense		6	1	127149389	1001
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000202560	retained_intron		5	-1	31254810	563
ENSMUSG00000102070	unprocessed_pseudogene	Gm28661	ENSMUST00000188231	unprocessed_pseudogene		1	-1	24615565	681
ENSMUSG00000028414	protein_coding	Fktn	ENSMUST00000221657	protein_coding		4	1	53714188	6241
ENSMUSG00000068887	protein_coding	Lce1j	ENSMUST00000186525	protein_coding	principal1	3	-1	92790514	703
ENSMUSG00000097166	antisense	9330179D12Rik	ENSMUST00000180569	antisense		6	1	127149626	1105
ENSMUSG00000068887	protein_coding	Lce1j	ENSMUST00000107304	protein_coding	principal1	3	-1	92789469	420
ENSMUSG00000066196	protein_coding	Spag8	ENSMUST00000107870	protein_coding	principal3	4	-1	43653594	1342
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000201057	retained_intron		5	-1	31261244	473
ENSMUSG00000101249	unprocessed_pseudogene	Gm29216	ENSMUST00000187117	unprocessed_pseudogene		1	-1	24616197	492
ENSMUSG00000080782	processed_pseudogene	Gm13495	ENSMUST00000121156	processed_pseudogene		2	-1	51938669	537
ENSMUSG00000083608	processed_pseudogene	Gm14863	ENSMUST00000119648	processed_pseudogene		X	1	9344026	307
ENSMUSG00000026000	protein_coding	Lancl1	ENSMUST00000027149	protein_coding	principal1	1	-1	67038865	4270
ENSMUSG00000028414	protein_coding	Fktn	ENSMUST00000061771	protein_coding	principal1	4	1	53720005	3370
ENSMUSG00000031444	protein_coding	F10	ENSMUST00000123768	protein_coding		8	1	13037587	609
ENSMUSG00000066724	transcribed_processed_pseudogene	Gm10175	ENSMUST00000086013	processed_transcript		7	-1	23947290	645
ENSMUSG00000066724	transcribed_processed_pseudogene	Gm10175	ENSMUST00000208752	transcribed_processed_pseudogene		7	-1	23947232	441
ENSMUSG00000031444	protein_coding	F10	ENSMUST00000128418	protein_coding		8	1	13037838	1395
ENSMUSG00000031444	protein_coding	F10	ENSMUST00000152034	protein_coding		8	1	13037838	1449
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000201953	retained_intron		5	-1	31263921	785
ENSMUSG00000009487	protein_coding	Otog	ENSMUST00000164538	protein_coding	principal1	7	1	46240987	10043
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000200936	retained_intron		5	-1	31263629	409
ENSMUSG00000092629	unprocessed_pseudogene	Vmn1r-ps85	ENSMUST00000173029	unprocessed_pseudogene		7	1	23778358	890
ENSMUSG00000092473	protein_coding	Vmn1r180	ENSMUST00000173816	protein_coding	principal1	7	1	23950632	5060
ENSMUSG00000026000	protein_coding	Lancl1	ENSMUST00000113979	protein_coding	principal1	1	-1	67038872	4461
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000202585	protein_coding		5	-1	31276981	774
ENSMUSG00000109065	unprocessed_pseudogene	Gm5324	ENSMUST00000208115	unprocessed_pseudogene		7	1	23965140	476
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000202589	protein_coding		5	-1	31281440	727
ENSMUSG00000026000	protein_coding	Lancl1	ENSMUST00000119559	protein_coding	principal1	1	-1	67038834	1385
ENSMUSG00000028417	protein_coding	Tal2	ENSMUST00000030124	protein_coding	principal1	4	1	53779705	2971
ENSMUSG00000026000	protein_coding	Lancl1	ENSMUST00000133508	processed_transcript		1	-1	67021065	388
ENSMUSG00000026000	protein_coding	Lancl1	ENSMUST00000149996	protein_coding		1	-1	67038834	570
ENSMUSG00000084403	processed_pseudogene	Rps15a-ps8	ENSMUST00000117914	processed_pseudogene		4	-1	53791456	387
ENSMUSG00000026000	protein_coding	Lancl1	ENSMUST00000189210	retained_intron		1	-1	67022218	2610
ENSMUSG00000046962	protein_coding	Zbtb21	ENSMUST00000232010	processed_transcript		16	-1	97962615	422
ENSMUSG00000099481	protein_coding	Xndc1	ENSMUST00000106950	protein_coding	principal1	7	1	102065511	3131
ENSMUSG00000056436	protein_coding	Cyct	ENSMUST00000028430	protein_coding	principal1	2	-1	76360450	655
ENSMUSG00000054626	protein_coding	Xlr	ENSMUST00000067782	protein_coding		X	-1	53797706	1860
ENSMUSG00000009487	protein_coding	Otog	ENSMUST00000210281	retained_intron		7	1	46241003	2204
ENSMUSG00000000184	protein_coding	Ccnd2	ENSMUST00000000188	protein_coding	principal1	6	-1	127151060	6330
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000201274	retained_intron		5	-1	31291039	2063
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000202410	retained_intron		5	-1	31286582	435
ENSMUSG00000009487	protein_coding	Otog	ENSMUST00000209802	protein_coding		7	1	46295375	3558
ENSMUSG00000000184	protein_coding	Ccnd2	ENSMUST00000201564	processed_transcript		6	-1	127139152	127
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000177457	protein_coding	alternative2	2	1	4017744	6538
ENSMUSG00000038564	protein_coding	Ift172	ENSMUST00000201809	protein_coding		5	-1	31291116	405
ENSMUSG00000103299	TEC	Gm38231	ENSMUST00000192030	TEC		10	1	37129744	347
ENSMUSG00000000184	protein_coding	Ccnd2	ENSMUST00000201985	processed_transcript		6	-1	127146688	415
ENSMUSG00000085898	processed_pseudogene	Gm6689	ENSMUST00000130905	processed_pseudogene		8	1	21091366	481
ENSMUSG00000093963	unprocessed_pseudogene	Gm21909	ENSMUST00000178260	unprocessed_pseudogene		1	-1	21316320	439
ENSMUSG00000000184	protein_coding	Ccnd2	ENSMUST00000201902	protein_coding		6	-1	127152193	627
ENSMUSG00000000184	protein_coding	Ccnd2	ENSMUST00000202363	retained_intron		6	-1	127151007	3506
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000132710	processed_transcript		2	1	4152863	4872
ENSMUSG00000000184	protein_coding	Ccnd2	ENSMUST00000201066	protein_coding		6	-1	127151033	983
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000091497	protein_coding	principal3	2	1	4152872	6208
ENSMUSG00000045518	protein_coding	Onecut3	ENSMUST00000051773	protein_coding	principal1	10	1	80494835	4776
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000239018	protein_coding		2	1	4285560	184
ENSMUSG00000061958	protein_coding	Defa38	ENSMUST00000077452	protein_coding	principal1	8	-1	21096050	351
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000175669	protein_coding		2	1	4300518	1560
ENSMUSG00000000184	protein_coding	Ccnd2	ENSMUST00000201637	protein_coding		6	-1	127151007	1006
ENSMUSG00000000184	protein_coding	Ccnd2	ENSMUST00000201857	processed_transcript		6	-1	127150961	115
ENSMUSG00000099481	protein_coding	Xndc1	ENSMUST00000153176	retained_intron		7	1	102065520	2456
ENSMUSG00000054626	protein_coding	Xlr	ENSMUST00000067763	protein_coding	principal1	X	-1	53797696	1032
ENSMUSG00000106755	processed_pseudogene	Tpi-rs11	ENSMUST00000202145	processed_pseudogene		6	-1	127183718	310
ENSMUSG00000046962	protein_coding	Zbtb21	ENSMUST00000113734	protein_coding	principal4	16	-1	97962621	6010
ENSMUSG00000104429	TEC	2610034O05Rik	ENSMUST00000194078	TEC		10	1	80508769	855
ENSMUSG00000054626	protein_coding	Xlr	ENSMUST00000114810	protein_coding	principal1	X	-1	53797696	984
ENSMUSG00000090726	unprocessed_pseudogene	Gm17421	ENSMUST00000167845	unprocessed_pseudogene		12	1	113369522	674
ENSMUSG00000104218	processed_pseudogene	Gm9134	ENSMUST00000193186	processed_pseudogene		12	-1	113381561	551
ENSMUSG00000048029	protein_coding	Eno4	ENSMUST00000200910	protein_coding	principal2	19	1	58943425	2567
ENSMUSG00000103198	processed_pseudogene	Gm9136	ENSMUST00000193368	processed_pseudogene		12	-1	113397224	454
ENSMUSG00000099481	protein_coding	Xndc1	ENSMUST00000141646	processed_transcript		7	1	102065522	560
ENSMUSG00000004798	protein_coding	Ulk2	ENSMUST00000004920	protein_coding	principal1	11	-1	61855073	5743
ENSMUSG00000102832	processed_pseudogene	Gm5190	ENSMUST00000192434	processed_pseudogene		12	1	113397229	357
ENSMUSG00000042766	protein_coding	Trim46	ENSMUST00000107464	protein_coding		3	-1	89245013	3252
ENSMUSG00000099481	protein_coding	Xndc1	ENSMUST00000146450	protein_coding		7	1	102065593	1050
ENSMUSG00000048029	protein_coding	Eno4	ENSMUST00000202382	protein_coding		19	1	58953177	1970
ENSMUSG00000055333	protein_coding	Fat2	ENSMUST00000068853	protein_coding	principal1	11	-1	55336564	14528
ENSMUSG00000099481	protein_coding	Xndc1	ENSMUST00000094130	protein_coding	principal1	7	1	102065758	2298
ENSMUSG00000113119	TEC	Gm48883	ENSMUST00000221416	TEC		13	-1	31834736	1832
ENSMUSG00000114759	processed_pseudogene	Gm10257	ENSMUST00000223572	processed_pseudogene		13	-1	100946815	411
ENSMUSG00000048029	protein_coding	Eno4	ENSMUST00000201123	nonsense_mediated_decay		19	1	58955456	1138
ENSMUSG00000055333	protein_coding	Fat2	ENSMUST00000108864	protein_coding	principal1	11	-1	55312257	14423
ENSMUSG00000099481	protein_coding	Xndc1	ENSMUST00000125197	retained_intron		7	1	102075917	749
ENSMUSG00000104450	TEC	Gm37830	ENSMUST00000195282	TEC		13	1	100872780	837
ENSMUSG00000046962	protein_coding	Zbtb21	ENSMUST00000063605	protein_coding	alternative2	16	-1	97962615	5463
ENSMUSG00000113935	antisense	Gm35732	ENSMUST00000221737	antisense		13	1	31971086	356
ENSMUSG00000022516	protein_coding	Nudt16l1	ENSMUST00000230931	protein_coding	principal1	16	1	4938761	1618
ENSMUSG00000083149	processed_pseudogene	Gm11380	ENSMUST00000118067	processed_pseudogene		13	1	31884225	560
ENSMUSG00000004798	protein_coding	Ulk2	ENSMUST00000129025	processed_transcript		11	-1	61854502	3151
ENSMUSG00000048029	protein_coding	Eno4	ENSMUST00000054280	protein_coding	alternative2	19	1	58943425	2568
ENSMUSG00000057396	protein_coding	Zfp759	ENSMUST00000224346	protein_coding		13	1	67121660	643
ENSMUSG00000100596	lincRNA	Gm29502	ENSMUST00000185979	lincRNA		13	1	100847433	3739
ENSMUSG00000112944	TEC	Gm48885	ENSMUST00000222438	TEC		13	-1	32099175	3897
ENSMUSG00000004798	protein_coding	Ulk2	ENSMUST00000157049	processed_transcript		11	-1	61804021	748
ENSMUSG00000114738	processed_pseudogene	Gm41041	ENSMUST00000225803	processed_pseudogene		13	-1	100909889	793
ENSMUSG00000057396	protein_coding	Zfp759	ENSMUST00000224426	processed_transcript		13	1	67128227	551
ENSMUSG00000022516	protein_coding	Nudt16l1	ENSMUST00000230201	retained_intron		16	1	4938985	1004
ENSMUSG00000099481	protein_coding	Xndc1	ENSMUST00000142629	nonsense_mediated_decay		7	1	102078784	2216
ENSMUSG00000093649	unprocessed_pseudogene	Gm20614	ENSMUST00000177106	unprocessed_pseudogene		16	1	20436038	632
ENSMUSG00000102578	TEC	Gm10576	ENSMUST00000191927	TEC		4	-1	101055263	825
ENSMUSG00000102578	TEC	Gm10576	ENSMUST00000192528	TEC		4	-1	101055262	705
ENSMUSG00000022516	protein_coding	Nudt16l1	ENSMUST00000229961	protein_coding		16	1	4939112	1162
ENSMUSG00000099481	protein_coding	Xndc1	ENSMUST00000140395	processed_transcript		7	1	102081058	724
ENSMUSG00000022516	protein_coding	Nudt16l1	ENSMUST00000050881	protein_coding		16	1	4939122	1329
ENSMUSG00000035824	protein_coding	Tk2	ENSMUST00000050211	protein_coding	principal1	8	-1	104248558	2406
ENSMUSG00000099481	protein_coding	Xndc1	ENSMUST00000143839	retained_intron		7	1	102081061	1031
ENSMUSG00000046962	protein_coding	Zbtb21	ENSMUST00000052089	protein_coding		16	-1	97962609	3072
ENSMUSG00000118384	lincRNA	9030625G05Rik	ENSMUST00000237753	lincRNA		18	-1	74981547	1047
ENSMUSG00000022516	protein_coding	Nudt16l1	ENSMUST00000230224	retained_intron		16	1	4939128	660
ENSMUSG00000110449	processed_pseudogene	Gm45780	ENSMUST00000212089	processed_pseudogene		8	1	68950321	224
ENSMUSG00000035824	protein_coding	Tk2	ENSMUST00000212275	protein_coding	principal1	8	-1	104248533	1507
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000147156	retained_intron		2	1	4300885	2407
ENSMUSG00000104213	IG_C_gene	Ighd	ENSMUST00000194162	IG_C_gene	principal5	12	-1	113416324	1806
ENSMUSG00000097397	antisense	Gm16861	ENSMUST00000181498	antisense		16	-1	4939633	1694
ENSMUSG00000046962	protein_coding	Zbtb21	ENSMUST00000231256	retained_intron		16	-1	97953098	2735
ENSMUSG00000057396	protein_coding	Zfp759	ENSMUST00000052716	protein_coding	principal1	13	1	67128228	3482
ENSMUSG00000075136	protein_coding	Olfr1164	ENSMUST00000099834	protein_coding	principal1	2	-1	88093966	1112
ENSMUSG00000110594	lincRNA	Gm33103	ENSMUST00000212717	lincRNA		8	-1	69001683	527
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000176803	nonsense_mediated_decay		2	1	4301003	684
ENSMUSG00000104213	IG_C_gene	Ighd	ENSMUST00000192250	IG_C_gene	alternative2	12	-1	113416324	802
ENSMUSG00000022672	protein_coding	Prkdc	ENSMUST00000023352	protein_coding	principal1	16	1	15637889	12647
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000175944	protein_coding		2	1	4332466	2094
ENSMUSG00000046962	protein_coding	Zbtb21	ENSMUST00000232187	protein_coding		16	-1	97962593	1452
ENSMUSG00000093381	unprocessed_pseudogene	Gm20615	ENSMUST00000177503	unprocessed_pseudogene		16	1	20488788	705
ENSMUSG00000046590	polymorphic_pseudogene	Olfr1165-ps	ENSMUST00000117860	polymorphic_pseudogene	principal1	2	-1	88101985	950
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000115037	protein_coding		2	1	4389614	526
ENSMUSG00000080800	processed_pseudogene	Gm11582	ENSMUST00000121041	processed_pseudogene		1	-1	60948465	236
ENSMUSG00000046962	protein_coding	Zbtb21	ENSMUST00000231263	protein_coding		16	-1	97962601	889
ENSMUSG00000069727	protein_coding	Zfp975	ENSMUST00000107992	protein_coding	principal1	7	-1	42692718	3148
ENSMUSG00000042766	protein_coding	Trim46	ENSMUST00000090924	protein_coding		3	-1	89245199	2721
ENSMUSG00000046962	protein_coding	Zbtb21	ENSMUST00000231560	protein_coding		16	-1	97962622	397
ENSMUSG00000098005	processed_pseudogene	Gm6114	ENSMUST00000182472	processed_pseudogene		13	-1	101013986	968
ENSMUSG00000031545	protein_coding	Gpat4	ENSMUST00000167004	protein_coding	principal1	8	-1	23208346	5518
ENSMUSG00000031651	protein_coding	Triml1	ENSMUST00000059692	protein_coding	principal1	8	-1	43141486	1850
ENSMUSG00000020705	protein_coding	Ddx42	ENSMUST00000021046	protein_coding	principal1	11	1	106216926	4011
ENSMUSG00000101078	protein_coding	Olfr1166	ENSMUST00000217575	protein_coding	principal1	2	-1	88128272	2004
ENSMUSG00000104839	antisense	Gm42794	ENSMUST00000197636	antisense		5	-1	87843418	835
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000141746	retained_intron		2	1	4389616	2412
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000080371	protein_coding	principal1	15	-1	59081989	4938
ENSMUSG00000069727	protein_coding	Zfp975	ENSMUST00000206356	processed_transcript		7	-1	42692742	1380
ENSMUSG00000062365	processed_pseudogene	Gm4968	ENSMUST00000071458	processed_pseudogene		6	1	127233762	858
ENSMUSG00000101078	protein_coding	Olfr1166	ENSMUST00000099833	protein_coding	principal1	2	-1	88124993	1628
ENSMUSG00000020705	protein_coding	Ddx42	ENSMUST00000152860	processed_transcript		11	1	106236996	445
ENSMUSG00000096722	processed_pseudogene	Hmgb1-ps9	ENSMUST00000179479	processed_pseudogene		13	-1	101039246	645
ENSMUSG00000042766	protein_coding	Trim46	ENSMUST00000041022	protein_coding	principal1	3	-1	89245897	3122
ENSMUSG00000091594	protein_coding	Gm17067	ENSMUST00000166837	protein_coding	principal1	7	-1	42727017	3673
ENSMUSG00000031545	protein_coding	Gpat4	ENSMUST00000210782	retained_intron		8	-1	23180227	887
ENSMUSG00000090602	processed_pseudogene	Gm5611	ENSMUST00000164523	processed_pseudogene		9	1	17030045	852
ENSMUSG00000091594	protein_coding	Gm17067	ENSMUST00000180131	protein_coding		7	-1	42706369	123
ENSMUSG00000024897	protein_coding	Apba1	ENSMUST00000025830	protein_coding	principal2	19	1	23758887	6620
ENSMUSG00000025277	protein_coding	Abhd6	ENSMUST00000166497	protein_coding	principal1	14	1	8002902	2226
ENSMUSG00000031651	protein_coding	Triml1	ENSMUST00000211446	processed_transcript		8	-1	43139040	1916
ENSMUSG00000031545	protein_coding	Gpat4	ENSMUST00000210992	retained_intron		8	-1	23180437	444
ENSMUSG00000107013	lincRNA	Gm43635	ENSMUST00000202533	lincRNA		6	-1	127254644	352
ENSMUSG00000027429	protein_coding	Sec23b	ENSMUST00000143573	protein_coding		2	1	144556229	944
ENSMUSG00000031651	protein_coding	Triml1	ENSMUST00000211541	retained_intron		8	-1	43136593	581
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000075767	protein_coding	alternative2	2	1	4400975	6761
ENSMUSG00000101061	lincRNA	Platr1	ENSMUST00000188474	lincRNA		1	1	134435628	3316
ENSMUSG00000024897	protein_coding	Apba1	ENSMUST00000237688	protein_coding	alternative2	19	1	23904457	3174
ENSMUSG00000111405	processed_pseudogene	Gm2594	ENSMUST00000214774	processed_pseudogene		9	-1	17502709	742
ENSMUSG00000081113	processed_pseudogene	Gm7308	ENSMUST00000121087	processed_pseudogene		6	-1	127282509	447
ENSMUSG00000025277	protein_coding	Abhd6	ENSMUST00000225234	protein_coding		14	1	8002919	1958
ENSMUSG00000118287	processed_pseudogene	Gm50300	ENSMUST00000236371	processed_pseudogene		19	1	23800538	280
ENSMUSG00000102722	TEC	Gm37935	ENSMUST00000192012	TEC		1	-1	134455473	982
ENSMUSG00000118340	antisense	Gm50301	ENSMUST00000236338	antisense		19	-1	23941594	1701
ENSMUSG00000031545	protein_coding	Gpat4	ENSMUST00000211260	retained_intron		8	-1	23208345	2316
ENSMUSG00000032890	protein_coding	Rims3	ENSMUST00000132895	processed_transcript		4	1	120854816	2099
ENSMUSG00000025277	protein_coding	Abhd6	ENSMUST00000026313	protein_coding	principal1	14	1	8002966	1401
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000176962	retained_intron		2	1	4401437	323
ENSMUSG00000042766	protein_coding	Trim46	ENSMUST00000139419	processed_transcript		3	-1	89239345	996
ENSMUSG00000111534	processed_pseudogene	Gm48846	ENSMUST00000214184	processed_pseudogene		9	1	17523979	267
ENSMUSG00000035824	protein_coding	Tk2	ENSMUST00000211995	nonsense_mediated_decay		8	-1	104248551	2312
ENSMUSG00000031545	protein_coding	Gpat4	ENSMUST00000209507	protein_coding		8	-1	23190938	794
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000115039	retained_intron		2	1	4401471	1247
ENSMUSG00000107153	lincRNA	Gm38404	ENSMUST00000202005	lincRNA		6	-1	127307967	2496
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000113482	protein_coding	principal1	2	1	31572651	3268
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000123919	retained_intron		2	1	4473194	230
ENSMUSG00000020461	protein_coding	Clhc1	ENSMUST00000020753	protein_coding	principal3	11	1	29547950	2200
ENSMUSG00000035824	protein_coding	Tk2	ENSMUST00000212165	retained_intron		8	-1	104231634	775
ENSMUSG00000055732	lincRNA	Gm9979	ENSMUST00000069457	lincRNA		13	1	40704005	3005
ENSMUSG00000042766	protein_coding	Trim46	ENSMUST00000143637	nonsense_mediated_decay		3	-1	89245872	2444
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000137889	protein_coding		2	1	31572791	372
ENSMUSG00000042766	protein_coding	Trim46	ENSMUST00000125952	protein_coding		3	-1	89246309	357
ENSMUSG00000020000	protein_coding	Moxd1	ENSMUST00000095784	protein_coding	principal1	10	1	24223517	3090
ENSMUSG00000086126	antisense	Evx1os	ENSMUST00000125305	antisense		6	-1	52314832	2916
ENSMUSG00000114590	lincRNA	5930438M14Rik	ENSMUST00000223648	lincRNA		13	1	101232127	2439
ENSMUSG00000117366	unprocessed_pseudogene	Gm50036	ENSMUST00000234662	unprocessed_pseudogene		17	1	32578546	187
ENSMUSG00000020461	protein_coding	Clhc1	ENSMUST00000208530	protein_coding	alternative2	11	1	29548026	2062
ENSMUSG00000086126	antisense	Evx1os	ENSMUST00000137258	antisense		6	-1	52313505	365
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000137504	retained_intron		2	1	31572792	1909
ENSMUSG00000107045	TEC	Gm43636	ENSMUST00000201501	TEC		6	1	127318341	2235
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000079746	protein_coding	principal3	5	-1	33274994	2279
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000153160	retained_intron		2	1	4559754	1956
ENSMUSG00000020461	protein_coding	Clhc1	ENSMUST00000131366	processed_transcript		11	1	29563833	788
ENSMUSG00000117392	processed_pseudogene	Gm8497	ENSMUST00000234355	processed_pseudogene		17	1	32586504	1354
ENSMUSG00000020461	protein_coding	Clhc1	ENSMUST00000123175	processed_transcript		11	1	29563850	657
ENSMUSG00000020000	protein_coding	Moxd1	ENSMUST00000154916	processed_transcript		10	1	24223545	431
ENSMUSG00000035824	protein_coding	Tk2	ENSMUST00000212209	nonsense_mediated_decay		8	-1	104248548	756
ENSMUSG00000106843	TEC	Gm42458	ENSMUST00000201914	TEC		6	-1	127325857	369
ENSMUSG00000030000	protein_coding	Add2	ENSMUST00000204059	protein_coding	principal3	6	1	86028704	8182
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000194386	protein_coding		2	1	31572814	425
ENSMUSG00000081575	processed_pseudogene	Gm12090	ENSMUST00000118692	processed_pseudogene		11	-1	29553010	758
ENSMUSG00000107243	processed_pseudogene	Gm43631	ENSMUST00000202011	processed_pseudogene		6	-1	127368479	369
ENSMUSG00000117479	unprocessed_pseudogene	Gm50038	ENSMUST00000234119	unprocessed_pseudogene		17	1	32602474	309
ENSMUSG00000081432	processed_pseudogene	Gm12593	ENSMUST00000120981	processed_pseudogene		4	1	59090187	743
ENSMUSG00000080730	processed_pseudogene	Gm11313	ENSMUST00000118779	processed_pseudogene		13	1	22758927	432
ENSMUSG00000035824	protein_coding	Tk2	ENSMUST00000212805	retained_intron		8	-1	104231233	416
ENSMUSG00000081083	processed_pseudogene	Gm6079	ENSMUST00000121356	processed_pseudogene		X	1	7686951	404
ENSMUSG00000038372	protein_coding	Gmds	ENSMUST00000041859	protein_coding	principal1	13	-1	32338740	1713
ENSMUSG00000020460	protein_coding	Rps27a	ENSMUST00000143418	processed_transcript		11	-1	29547891	681
ENSMUSG00000030000	protein_coding	Add2	ENSMUST00000203366	protein_coding	alternative2	6	1	86028747	3407
ENSMUSG00000062328	protein_coding	Rpl17	ENSMUST00000237431	protein_coding	principal1	18	1	74998558	1326
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000110042	protein_coding		13	-1	51704971	1249
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000226393	processed_transcript		15	-1	58956840	2062
ENSMUSG00000071493	protein_coding	Vmn1r208	ENSMUST00000227136	protein_coding	principal1	13	-1	22777400	3156
ENSMUSG00000035824	protein_coding	Tk2	ENSMUST00000212854	nonsense_mediated_decay		8	-1	104248532	707
ENSMUSG00000030000	protein_coding	Add2	ENSMUST00000203445	protein_coding		6	1	86052248	779
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000201575	protein_coding		5	-1	33274992	2091
ENSMUSG00000020460	protein_coding	Rps27a	ENSMUST00000147782	processed_transcript		11	-1	29546671	565
ENSMUSG00000005503	protein_coding	Evx1	ENSMUST00000031787	protein_coding	principal1	6	1	52313498	2877
ENSMUSG00000071493	protein_coding	Vmn1r208	ENSMUST00000124841	protein_coding	principal1	13	-1	22773325	927
ENSMUSG00000035824	protein_coding	Tk2	ENSMUST00000212279	processed_transcript		8	-1	104243448	280
ENSMUSG00000062328	protein_coding	Rpl17	ENSMUST00000079716	protein_coding	principal1	18	1	75000477	775
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000055244	protein_coding		2	1	31572817	3648
ENSMUSG00000087643	antisense	Gm11314	ENSMUST00000148492	antisense		13	1	22772656	541
ENSMUSG00000045777	protein_coding	Ifitm10	ENSMUST00000131791	processed_transcript		7	-1	142338022	2973
ENSMUSG00000038372	protein_coding	Gmds	ENSMUST00000178294	retained_intron		13	-1	32338585	2003
ENSMUSG00000005503	protein_coding	Evx1	ENSMUST00000129243	protein_coding		6	1	52313552	1034
ENSMUSG00000100891	lincRNA	2810049E08Rik	ENSMUST00000185600	lincRNA		13	1	83891208	1102
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000226976	processed_transcript		15	-1	59040597	2241
ENSMUSG00000092554	processed_pseudogene	Gm18128	ENSMUST00000172625	processed_pseudogene		7	1	42734409	511
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000176828	protein_coding		2	1	4559756	4355
ENSMUSG00000038372	protein_coding	Gmds	ENSMUST00000178313	processed_transcript		13	-1	32227241	645
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000227045	protein_coding		15	-1	58953583	487
ENSMUSG00000114379	lincRNA	Gm4241	ENSMUST00000223760	lincRNA		13	-1	83987991	570
ENSMUSG00000025092	protein_coding	Hspa12a	ENSMUST00000066285	protein_coding	principal1	19	-1	58860984	5734
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000142452	retained_intron		2	1	4559775	2616
ENSMUSG00000038372	protein_coding	Gmds	ENSMUST00000179717	nonsense_mediated_decay		13	-1	32338624	382
ENSMUSG00000114930	processed_pseudogene	Gm8447	ENSMUST00000225255	processed_pseudogene		13	-1	83998439	893
ENSMUSG00000076617	IG_C_gene	Ighm	ENSMUST00000177715	IG_C_gene	principal5	12	-1	113422730	1698
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000154050	nonsense_mediated_decay		2	1	31572827	453
ENSMUSG00000030000	protein_coding	Add2	ENSMUST00000205034	protein_coding	alternative2	6	1	86078057	3266
ENSMUSG00000085173	processed_pseudogene	Gm2869	ENSMUST00000124359	processed_pseudogene		8	1	21100651	2621
ENSMUSG00000076617	IG_C_gene	Ighm	ENSMUST00000103426	IG_C_gene	alternative2	12	-1	113422730	1493
ENSMUSG00000026657	protein_coding	Frmd4a	ENSMUST00000176864	nonsense_mediated_decay		2	1	4566176	671
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000227196	protein_coding		15	-1	58953580	725
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000134553	nonsense_mediated_decay		2	1	31603271	908
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000202868	protein_coding	alternative1	5	-1	33274992	2436
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000228067	protein_coding		15	-1	58956472	612
ENSMUSG00000106883	processed_pseudogene	Gm34091	ENSMUST00000200875	processed_pseudogene		6	1	127411130	604
ENSMUSG00000025092	protein_coding	Hspa12a	ENSMUST00000238055	protein_coding		19	-1	58822121	596
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000129903	protein_coding		2	1	31604706	1073
ENSMUSG00000038598	protein_coding	Shoc1	ENSMUST00000107547	protein_coding	principal1	4	-1	59138983	4664
ENSMUSG00000030000	protein_coding	Add2	ENSMUST00000203724	protein_coding	principal3	6	1	86078057	3143
ENSMUSG00000059397	protein_coding	Olfr54	ENSMUST00000215409	protein_coding	principal1	11	1	51014357	4782
ENSMUSG00000098087	lincRNA	Gm17750	ENSMUST00000182477	lincRNA		13	-1	84064772	529
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000202962	protein_coding		5	-1	33274981	3595
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000150473	protein_coding		2	1	31612531	843
ENSMUSG00000059397	protein_coding	Olfr54	ENSMUST00000217480	protein_coding	principal1	11	1	51014236	5048
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000227290	processed_transcript		15	-1	58972539	400
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000202135	retained_intron		5	-1	33249250	660
ENSMUSG00000059397	protein_coding	Olfr54	ENSMUST00000072152	protein_coding	principal1	11	1	51027004	942
ENSMUSG00000025092	protein_coding	Hspa12a	ENSMUST00000236453	retained_intron		19	-1	58801259	748
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000130578	protein_coding		2	1	31614761	437
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000227238	retained_intron		15	-1	58956836	776
ENSMUSG00000028420	protein_coding	Tmem38b	ENSMUST00000030127	protein_coding	principal1	4	1	53826045	2862
ENSMUSG00000026843	protein_coding	Fubp3	ENSMUST00000132534	retained_intron		2	1	31615179	2342
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000201514	retained_intron		5	-1	33249553	873
ENSMUSG00000030000	protein_coding	Add2	ENSMUST00000203196	protein_coding	alternative2	6	1	86082781	1970
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000228365	processed_transcript		15	-1	59040596	743
ENSMUSG00000030000	protein_coding	Add2	ENSMUST00000203786	protein_coding	principal3	6	1	86082781	2289
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000201275	nonsense_mediated_decay		5	-1	33269488	743
ENSMUSG00000114335	processed_pseudogene	Gm8456	ENSMUST00000224872	processed_pseudogene		13	1	84166453	272
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000228655	retained_intron		15	-1	59082005	2956
ENSMUSG00000097921	lincRNA	Gm26576	ENSMUST00000181018	lincRNA		10	1	66920302	1977
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000201372	protein_coding		5	-1	33274979	768
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000226923	retained_intron		15	-1	59055464	2694
ENSMUSG00000021550	protein_coding	2210016F16Rik	ENSMUST00000022032	protein_coding	principal1	13	-1	58385225	3051
ENSMUSG00000038598	protein_coding	Shoc1	ENSMUST00000122832	retained_intron		4	-1	59111113	2338
ENSMUSG00000022353	protein_coding	Mtss1	ENSMUST00000227797	retained_intron		15	-1	59082001	3813
ENSMUSG00000028420	protein_coding	Tmem38b	ENSMUST00000150803	processed_transcript		4	1	53826055	586
ENSMUSG00000030000	protein_coding	Add2	ENSMUST00000203279	protein_coding		6	1	86085862	1454
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000202820	protein_coding		5	-1	33269636	539
ENSMUSG00000097292	antisense	A230107N01Rik	ENSMUST00000180894	antisense		13	-1	84222175	2348
ENSMUSG00000086660	sense_intronic	Gm12594	ENSMUST00000132140	sense_intronic		4	-1	59137454	499
ENSMUSG00000058119	protein_coding	Gm5771	ENSMUST00000049079	protein_coding	principal1	6	1	41392356	798
ENSMUSG00000028420	protein_coding	Tmem38b	ENSMUST00000151206	processed_transcript		4	1	53826057	689
ENSMUSG00000117698	processed_transcript	BC037704	ENSMUST00000236819	bidirectional_promoter_lncRNA		19	1	43675178	1999
ENSMUSG00000117698	processed_transcript	BC037704	ENSMUST00000238165	lincRNA		19	1	43675178	1999
ENSMUSG00000097292	antisense	A230107N01Rik	ENSMUST00000185973	antisense		13	-1	84222100	1491
ENSMUSG00000028420	protein_coding	Tmem38b	ENSMUST00000144167	protein_coding		4	1	53840470	608
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000202632	retained_intron		5	-1	33269524	749
ENSMUSG00000030000	protein_coding	Add2	ENSMUST00000032069	protein_coding	principal3	6	1	86078084	3119
ENSMUSG00000025092	protein_coding	Hspa12a	ENSMUST00000236429	retained_intron		19	-1	58861012	1510
ENSMUSG00000045777	protein_coding	Ifitm10	ENSMUST00000059223	protein_coding		7	-1	142372441	3412
ENSMUSG00000112708	processed_pseudogene	Gm8255	ENSMUST00000218693	processed_pseudogene		12	1	79113720	305
ENSMUSG00000002240	protein_coding	Prr27	ENSMUST00000101056	protein_coding	alternative2	5	1	87825686	1337
ENSMUSG00000025092	protein_coding	Hspa12a	ENSMUST00000235263	protein_coding		19	-1	58860967	1400
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000200899	protein_coding		5	-1	33274579	474
ENSMUSG00000118144	processed_pseudogene	Gm50313	ENSMUST00000237271	processed_pseudogene		18	-1	75005604	290
ENSMUSG00000085359	lincRNA	Gm12336	ENSMUST00000125962	lincRNA		11	-1	75423340	322
ENSMUSG00000002240	protein_coding	Prr27	ENSMUST00000002310	protein_coding	principal3	5	1	87825686	1313
ENSMUSG00000045294	protein_coding	Insig1	ENSMUST00000059155	protein_coding	principal1	5	1	28071363	2697
ENSMUSG00000037373	protein_coding	Ctbp1	ENSMUST00000202190	protein_coding		5	-1	33274590	477
ENSMUSG00000025092	protein_coding	Hspa12a	ENSMUST00000237297	protein_coding		19	-1	58943654	877
ENSMUSG00000019768	protein_coding	Esr1	ENSMUST00000149195	processed_transcript		10	1	4611593	2847
ENSMUSG00000001783	protein_coding	Rtcb	ENSMUST00000001834	protein_coding	principal1	10	-1	85957823	2009
ENSMUSG00000045777	protein_coding	Ifitm10	ENSMUST00000140032	processed_transcript		7	-1	142372269	2767
ENSMUSG00000107161	processed_pseudogene	Gm43850	ENSMUST00000202021	processed_pseudogene		5	1	33255318	578
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182066	protein_coding	alternative1	18	-1	6112363	4506
ENSMUSG00000084224	processed_pseudogene	Gm12337	ENSMUST00000119634	processed_pseudogene		11	1	75427753	400
ENSMUSG00000032890	protein_coding	Rims3	ENSMUST00000071093	protein_coding	principal1	4	1	120854819	6505
ENSMUSG00000092238	processed_pseudogene	Gm6004	ENSMUST00000173237	processed_pseudogene		7	1	42750414	1116
ENSMUSG00000025092	protein_coding	Hspa12a	ENSMUST00000235662	processed_transcript		19	-1	58846445	754
ENSMUSG00000025092	protein_coding	Hspa12a	ENSMUST00000236839	processed_transcript		19	-1	58860638	377
ENSMUSG00000045294	protein_coding	Insig1	ENSMUST00000199728	retained_intron		5	1	28074666	757
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000112036	retained_intron		1	-1	138116441	5740
ENSMUSG00000032890	protein_coding	Rims3	ENSMUST00000106283	protein_coding	principal1	4	1	120861777	6437
ENSMUSG00000045777	protein_coding	Ifitm10	ENSMUST00000084412	protein_coding	alternative2	7	-1	142372259	1158
ENSMUSG00000069662	protein_coding	Marcks	ENSMUST00000092584	protein_coding	principal1	10	-1	37138920	4048
ENSMUSG00000001783	protein_coding	Rtcb	ENSMUST00000139413	retained_intron		10	-1	85955779	992
ENSMUSG00000025092	protein_coding	Hspa12a	ENSMUST00000235791	processed_transcript		19	-1	58943623	861
ENSMUSG00000045975	protein_coding	C2cd2	ENSMUST00000170757	protein_coding	principal1	16	-1	97922633	6556
ENSMUSG00000086148	lincRNA	Gm15271	ENSMUST00000134627	lincRNA		10	1	24447490	2110
ENSMUSG00000025092	protein_coding	Hspa12a	ENSMUST00000237786	processed_transcript		19	-1	58943654	612
ENSMUSG00000085111	protein_coding	Ascl4	ENSMUST00000170396	protein_coding	principal1	10	1	85927681	2016
ENSMUSG00000083196	processed_pseudogene	Gm15272	ENSMUST00000120865	processed_pseudogene		10	-1	24514511	233
ENSMUSG00000083509	unprocessed_pseudogene	Defa-ps4	ENSMUST00000118021	unprocessed_pseudogene		8	1	21119166	183
ENSMUSG00000045975	protein_coding	C2cd2	ENSMUST00000232343	processed_transcript		16	-1	97860410	902
ENSMUSG00000032890	protein_coding	Rims3	ENSMUST00000171363	protein_coding	principal1	4	1	120877869	977
ENSMUSG00000045777	protein_coding	Ifitm10	ENSMUST00000105988	protein_coding	principal4	7	-1	142373753	824
ENSMUSG00000104526	TEC	1700045I11Rik	ENSMUST00000194752	TEC		4	1	42170845	493
ENSMUSG00000045975	protein_coding	C2cd2	ENSMUST00000232063	retained_intron		16	-1	97875284	1435
ENSMUSG00000045777	protein_coding	Ifitm10	ENSMUST00000123543	processed_transcript		7	-1	142372881	369
ENSMUSG00000067750	protein_coding	Khdc1a	ENSMUST00000088407	protein_coding	principal1	1	1	21349641	1987
ENSMUSG00000020460	protein_coding	Rps27a	ENSMUST00000102845	protein_coding	principal1	11	-1	29548109	791
ENSMUSG00000045975	protein_coding	C2cd2	ENSMUST00000232542	processed_transcript		16	-1	97864993	597
ENSMUSG00000091926	protein_coding	Vmn2r62	ENSMUST00000169130	protein_coding	principal1	7	-1	42793525	2992
ENSMUSG00000118407	protein_coding	Gm50457	ENSMUST00000238707	protein_coding	principal1	18	1	52825310	974
ENSMUSG00000045975	protein_coding	C2cd2	ENSMUST00000231575	protein_coding		16	-1	97870280	438
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000235234	protein_coding		19	-1	46969568	7353
ENSMUSG00000108172	processed_pseudogene	Gm21054	ENSMUST00000203981	processed_pseudogene		6	-1	103964639	380
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000111373	protein_coding	alternative2	2	-1	91179315	5641
ENSMUSG00000085111	protein_coding	Ascl4	ENSMUST00000156605	nonsense_mediated_decay		10	1	85928774	483
ENSMUSG00000112613	processed_pseudogene	Gm48175	ENSMUST00000218274	processed_pseudogene		10	1	85954960	180
ENSMUSG00000020460	protein_coding	Rps27a	ENSMUST00000102844	protein_coding	principal1	11	-1	29547860	637
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000047480	protein_coding	principal2	18	-1	63387183	10724
ENSMUSG00000109962	lincRNA	1700025L06Rik	ENSMUST00000209655	lincRNA		7	-1	46349054	893
ENSMUSG00000109962	lincRNA	1700025L06Rik	ENSMUST00000211477	lincRNA		7	-1	46349373	1623
ENSMUSG00000074358	protein_coding	Ccdc61	ENSMUST00000206037	retained_intron		7	-1	18891395	513
ENSMUSG00000109962	lincRNA	1700025L06Rik	ENSMUST00000210215	lincRNA		7	-1	46349064	501
ENSMUSG00000100899	protein_coding	Olfr1167	ENSMUST00000216951	protein_coding	principal1	2	-1	88155193	4276
ENSMUSG00000086194	unprocessed_pseudogene	Gm16329	ENSMUST00000148174	unprocessed_pseudogene		1	1	21354005	371
ENSMUSG00000107074	processed_pseudogene	Gm18100	ENSMUST00000200897	processed_pseudogene		6	1	104300126	452
ENSMUSG00000100899	protein_coding	Olfr1167	ENSMUST00000099832	protein_coding	principal1	2	-1	88150083	1100
ENSMUSG00000020460	protein_coding	Rps27a	ENSMUST00000150739	processed_transcript		11	-1	29547882	928
ENSMUSG00000094436	processed_pseudogene	Gm16327	ENSMUST00000137146	processed_pseudogene		1	1	21364803	228
ENSMUSG00000036299	protein_coding	BC031181	ENSMUST00000040284	protein_coding	principal1	18	1	75005868	979
ENSMUSG00000079324	protein_coding	4932414N04Rik	ENSMUST00000125621	protein_coding		2	1	68656486	940
ENSMUSG00000036299	protein_coding	BC031181	ENSMUST00000236421	protein_coding	principal1	18	1	75005869	524
ENSMUSG00000114568	lincRNA	Gm48732	ENSMUST00000223605	lincRNA		13	-1	67145366	1617
ENSMUSG00000045975	protein_coding	C2cd2	ENSMUST00000232572	retained_intron		16	-1	97922606	2385
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000137141	nonsense_mediated_decay		18	-1	63030312	3200
ENSMUSG00000067156	transcribed_processed_pseudogene	Gm7337	ENSMUST00000181439	processed_transcript		5	1	87850359	2655
ENSMUSG00000067156	transcribed_processed_pseudogene	Gm7337	ENSMUST00000180954	transcribed_processed_pseudogene		5	1	87850518	1125
ENSMUSG00000045975	protein_coding	C2cd2	ENSMUST00000231903	protein_coding		16	-1	97879674	673
ENSMUSG00000036299	protein_coding	BC031181	ENSMUST00000237263	protein_coding	principal1	18	1	75005900	1266
ENSMUSG00000114677	transcribed_processed_pseudogene	Gm48733	ENSMUST00000225399	processed_transcript		13	1	67167781	300
ENSMUSG00000114677	transcribed_processed_pseudogene	Gm48733	ENSMUST00000225091	transcribed_processed_pseudogene		13	1	67167811	230
ENSMUSG00000097425	protein_coding	Vmn1r181	ENSMUST00000228842	protein_coding	principal1	7	1	23974615	4491
ENSMUSG00000045975	protein_coding	C2cd2	ENSMUST00000231332	retained_intron		16	-1	97892281	676
ENSMUSG00000036299	protein_coding	BC031181	ENSMUST00000235420	retained_intron		18	1	75008206	838
ENSMUSG00000045975	protein_coding	C2cd2	ENSMUST00000232165	protein_coding		16	-1	97962598	763
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000238156	protein_coding		18	-1	63386269	8773
ENSMUSG00000081669	processed_pseudogene	Npm3-ps1	ENSMUST00000119728	processed_pseudogene		6	1	85076192	528
ENSMUSG00000097425	protein_coding	Vmn1r181	ENSMUST00000227637	protein_coding	principal1	7	1	23974615	4587
ENSMUSG00000045975	protein_coding	C2cd2	ENSMUST00000231953	processed_transcript		16	-1	97922608	355
ENSMUSG00000097425	protein_coding	Vmn1r181	ENSMUST00000228399	protein_coding	principal1	7	1	23974615	4616
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000183217	protein_coding	alternative2	18	-1	63386457	8564
ENSMUSG00000097425	protein_coding	Vmn1r181	ENSMUST00000226978	protein_coding	principal1	7	1	23982482	4371
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000238051	protein_coding	alternative2	18	-1	63386269	8337
ENSMUSG00000017688	protein_coding	Hnf4g	ENSMUST00000108393	protein_coding		3	1	3508030	2224
ENSMUSG00000097425	protein_coding	Vmn1r181	ENSMUST00000228607	retained_intron		7	1	23982482	4561
ENSMUSG00000097425	protein_coding	Vmn1r181	ENSMUST00000226843	protein_coding	principal1	7	1	23982482	4496
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000132576	protein_coding		18	-1	63029060	1318
ENSMUSG00000097425	protein_coding	Vmn1r181	ENSMUST00000228531	retained_intron		7	1	23982482	4686
ENSMUSG00000100448	protein_coding	H2al1k	ENSMUST00000178196	protein_coding	principal1	X	1	9350627	510
ENSMUSG00000097425	protein_coding	Vmn1r181	ENSMUST00000181796	protein_coding	principal1	7	1	23983961	1080
ENSMUSG00000017688	protein_coding	Hnf4g	ENSMUST00000108394	protein_coding	principal1	3	1	3634150	2327
ENSMUSG00000009471	protein_coding	Myod1	ENSMUST00000072514	protein_coding	principal1	7	1	46376474	1861
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000123322	retained_intron		18	-1	63033010	3739
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000236438	retained_intron		18	-1	63053043	1452
ENSMUSG00000102283	unprocessed_pseudogene	Gm37000	ENSMUST00000193058	unprocessed_pseudogene		3	1	3546368	428
ENSMUSG00000095870	protein_coding	Lce1k	ENSMUST00000179917	protein_coding	principal1	3	-1	92807891	663
ENSMUSG00000037242	protein_coding	Clic4	ENSMUST00000037099	protein_coding	principal1	4	-1	135272814	4119
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000235659	retained_intron		18	-1	63082918	889
ENSMUSG00000073916	protein_coding	Olfr669	ENSMUST00000214260	protein_coding	principal1	7	1	104934240	2336
ENSMUSG00000073916	protein_coding	Olfr669	ENSMUST00000210138	protein_coding	principal1	7	1	104934240	2195
ENSMUSG00000025429	protein_coding	Pstpip2	ENSMUST00000238172	protein_coding		18	1	77789914	1056
ENSMUSG00000058558	protein_coding	Rpl5	ENSMUST00000082223	protein_coding	principal1	5	1	107900502	2045
ENSMUSG00000037242	protein_coding	Clic4	ENSMUST00000143370	retained_intron		4	-1	135272814	3093
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000032326	protein_coding	principal1	6	1	135011612	1764
ENSMUSG00000041722	protein_coding	Khdc1c	ENSMUST00000070223	protein_coding	principal1	1	1	21368331	1946
ENSMUSG00000073916	protein_coding	Olfr669	ENSMUST00000098164	protein_coding	principal1	7	1	104938528	954
ENSMUSG00000082928	processed_pseudogene	Gm12785	ENSMUST00000122052	processed_pseudogene		4	-1	101210587	172
ENSMUSG00000110284	processed_pseudogene	Gm45273	ENSMUST00000211559	processed_pseudogene		7	1	104942970	281
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000069623	protein_coding	alternative2	4	-1	140666012	4531
ENSMUSG00000085507	unprocessed_pseudogene	Gm2709	ENSMUST00000142979	unprocessed_pseudogene		1	1	21372670	350
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000130851	protein_coding		6	1	135011622	435
ENSMUSG00000061342	protein_coding	Olfr1168	ENSMUST00000215996	protein_coding	principal1	2	1	88181880	2322
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000168536	protein_coding	principal1	19	-1	46962308	3728
ENSMUSG00000017195	protein_coding	Zpbp2	ENSMUST00000107509	protein_coding	alternative2	11	1	98551150	1577
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000205244	protein_coding		6	1	135011624	607
ENSMUSG00000061342	protein_coding	Olfr1168	ENSMUST00000079599	protein_coding	principal1	2	1	88184879	939
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000182233	processed_transcript		18	-1	63146802	3459
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000097820	protein_coding	alternative2	4	-1	140648756	4382
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000182166	protein_coding		18	-1	63386269	1988
ENSMUSG00000027429	protein_coding	Sec23b	ENSMUST00000028916	protein_coding	principal1	2	1	144556256	2779
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000237812	retained_intron		18	-1	63118699	1803
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000235366	protein_coding		18	-1	63145128	689
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000046860	protein_coding		18	-1	63326649	1125
ENSMUSG00000062737	protein_coding	Prl3d2	ENSMUST00000080755	protein_coding	principal2	13	1	27121698	853
ENSMUSG00000027429	protein_coding	Sec23b	ENSMUST00000155258	protein_coding		2	1	144556281	353
ENSMUSG00000025429	protein_coding	Pstpip2	ENSMUST00000114741	protein_coding	principal1	18	1	77794545	2267
ENSMUSG00000058558	protein_coding	Rpl5	ENSMUST00000123183	retained_intron		5	1	107900572	854
ENSMUSG00000041482	protein_coding	Piezo2	ENSMUST00000182177	retained_intron		18	-1	63387171	2963
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000131719	retained_intron		6	1	135011626	978
ENSMUSG00000062737	protein_coding	Prl3d2	ENSMUST00000164964	protein_coding	alternative2	13	1	27121742	675
ENSMUSG00000058975	protein_coding	Kcnc1	ENSMUST00000025202	protein_coding		7	1	46396497	7760
ENSMUSG00000027429	protein_coding	Sec23b	ENSMUST00000143921	processed_transcript		2	1	144556312	635
ENSMUSG00000118039	TEC	Gm50171	ENSMUST00000237782	TEC		18	-1	63168472	1921
ENSMUSG00000027429	protein_coding	Sec23b	ENSMUST00000155876	protein_coding		2	1	144556319	523
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000105799	protein_coding	alternative2	4	-1	140648750	4508
ENSMUSG00000092456	protein_coding	V1rd19	ENSMUST00000236162	protein_coding	principal1	7	1	24001691	2269
ENSMUSG00000027429	protein_coding	Sec23b	ENSMUST00000149697	protein_coding		2	1	144556334	694
ENSMUSG00000058558	protein_coding	Rpl5	ENSMUST00000153590	protein_coding		5	1	107900874	834
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000105798	protein_coding	alternative2	4	-1	140584343	3839
ENSMUSG00000058558	protein_coding	Rpl5	ENSMUST00000129944	retained_intron		5	1	107902121	634
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000105797	protein_coding		4	-1	140581818	3507
ENSMUSG00000092456	protein_coding	V1rd19	ENSMUST00000173571	protein_coding	principal1	7	1	24003091	1157
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000138493	nonsense_mediated_decay		4	-1	140577094	3043
ENSMUSG00000058975	protein_coding	Kcnc1	ENSMUST00000160433	protein_coding	principal1	7	1	46397648	3156
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000039204	protein_coding	principal4	4	-1	140648750	4493
ENSMUSG00000073529	processed_transcript	F830208F22Rik	ENSMUST00000143732	processed_transcript		18	-1	77796743	2891
ENSMUSG00000058558	protein_coding	Rpl5	ENSMUST00000140659	retained_intron		5	1	107904114	1024
ENSMUSG00000024667	protein_coding	Tmem216	ENSMUST00000145210	nonsense_mediated_decay		19	-1	10555736	774
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000155277	retained_intron		6	1	135011632	4006
ENSMUSG00000073529	processed_transcript	F830208F22Rik	ENSMUST00000125396	processed_transcript		18	-1	77796390	2355
ENSMUSG00000058975	protein_coding	Kcnc1	ENSMUST00000160234	processed_transcript		7	1	46422680	531
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000154979	protein_coding		4	-1	140617065	473
ENSMUSG00000019873	protein_coding	Reep3	ENSMUST00000020023	protein_coding	principal1	10	-1	67096945	5430
ENSMUSG00000094926	processed_pseudogene	Gm16533	ENSMUST00000140035	processed_pseudogene		1	1	21379555	228
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000205055	protein_coding		6	1	135011633	551
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000147426	protein_coding		4	-1	140581802	804
ENSMUSG00000058558	protein_coding	Rpl5	ENSMUST00000151767	retained_intron		5	1	107906622	815
ENSMUSG00000118318	protein_coding	Vmn1r183	ENSMUST00000236959	protein_coding	principal1	7	1	24053254	9522
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000155698	retained_intron		6	1	135011635	620
ENSMUSG00000019873	protein_coding	Reep3	ENSMUST00000217841	protein_coding		10	-1	67096846	2925
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000086961	nonsense_mediated_decay		19	-1	46969474	3939
ENSMUSG00000036905	protein_coding	C1qb	ENSMUST00000046384	protein_coding	principal1	4	-1	136886187	1088
ENSMUSG00000027429	protein_coding	Sec23b	ENSMUST00000128210	processed_transcript		2	1	144564899	2417
ENSMUSG00000118318	protein_coding	Vmn1r183	ENSMUST00000086012	protein_coding	principal1	7	1	24054772	920
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000236727	protein_coding		19	-1	46929225	2920
ENSMUSG00000036327	protein_coding	Qsox2	ENSMUST00000091263	protein_coding		2	-1	26225371	4011
ENSMUSG00000079324	protein_coding	4932414N04Rik	ENSMUST00000128259	protein_coding	principal1	2	1	68657884	3645
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000236501	protein_coding	principal1	19	-1	46961920	3183
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000204646	protein_coding		6	1	135011644	1139
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000140403	nonsense_mediated_decay		4	-1	140568381	871
ENSMUSG00000017195	protein_coding	Zpbp2	ENSMUST00000017339	protein_coding	principal3	11	1	98551152	1455
ENSMUSG00000027429	protein_coding	Sec23b	ENSMUST00000146487	processed_transcript		2	1	144577123	3118
ENSMUSG00000095331	processed_pseudogene	Ptma-ps1	ENSMUST00000181079	processed_pseudogene		7	1	24063832	309
ENSMUSG00000019873	protein_coding	Reep3	ENSMUST00000218920	protein_coding		10	-1	67034632	838
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000154558	protein_coding		6	1	135011653	1078
ENSMUSG00000024667	protein_coding	Tmem216	ENSMUST00000123788	nonsense_mediated_decay		19	-1	10555751	935
ENSMUSG00000019873	protein_coding	Reep3	ENSMUST00000219431	retained_intron		10	-1	67037322	2104
ENSMUSG00000079324	protein_coding	4932414N04Rik	ENSMUST00000112332	processed_transcript		2	1	68657913	769
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000125045	retained_intron		4	-1	140592040	516
ENSMUSG00000017195	protein_coding	Zpbp2	ENSMUST00000107513	protein_coding	alternative2	11	1	98551178	1240
ENSMUSG00000079324	protein_coding	4932414N04Rik	ENSMUST00000135023	retained_intron		2	1	68716291	248
ENSMUSG00000040964	protein_coding	Arhgef10l	ENSMUST00000143614	protein_coding		4	-1	140649360	706
ENSMUSG00000108613	antisense	Gm36694	ENSMUST00000205855	antisense		7	-1	24073164	2719
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000123022	processed_transcript		6	1	135015351	693
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000134549	retained_intron		6	1	135015822	791
ENSMUSG00000017195	protein_coding	Zpbp2	ENSMUST00000126236	processed_transcript		11	1	98555443	484
ENSMUSG00000024667	protein_coding	Tmem216	ENSMUST00000025569	protein_coding		19	-1	10556238	1101
ENSMUSG00000108960	unprocessed_pseudogene	Gm44943	ENSMUST00000207254	unprocessed_pseudogene		7	1	24073915	300
ENSMUSG00000079324	protein_coding	4932414N04Rik	ENSMUST00000055930	protein_coding	principal1	2	1	68659842	3519
ENSMUSG00000024667	protein_coding	Tmem216	ENSMUST00000236561	nonsense_mediated_decay		19	-1	10555756	876
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000007250	protein_coding	principal1	17	-1	35046622	2886
ENSMUSG00000085079	protein_coding	Khdc1b	ENSMUST00000147615	protein_coding	principal1	1	1	21383556	2236
ENSMUSG00000030204	protein_coding	Ddx47	ENSMUST00000155022	protein_coding		6	1	135019000	3269
ENSMUSG00000074358	protein_coding	Ccdc61	ENSMUST00000098780	protein_coding	principal1	7	-1	18910415	2022
ENSMUSG00000082200	processed_pseudogene	Gm12871	ENSMUST00000118758	processed_pseudogene		4	1	120901223	438
ENSMUSG00000063177	protein_coding	Klk1b27	ENSMUST00000079859	protein_coding	principal1	7	1	44052290	889
ENSMUSG00000024667	protein_coding	Tmem216	ENSMUST00000059582	protein_coding		19	-1	10555751	999
ENSMUSG00000089916	antisense	Gm16160	ENSMUST00000160105	antisense		3	1	102203956	781
ENSMUSG00000017195	protein_coding	Zpbp2	ENSMUST00000107511	protein_coding	alternative2	11	1	98551130	1395
ENSMUSG00000108538	unprocessed_pseudogene	Gm45197	ENSMUST00000205288	unprocessed_pseudogene		7	-1	44070005	151
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000174062	retained_intron		10	1	67096125	2772
ENSMUSG00000024667	protein_coding	Tmem216	ENSMUST00000154383	protein_coding	principal1	19	-1	10555751	927
ENSMUSG00000108400	unprocessed_pseudogene	Klk1b14-ps	ENSMUST00000206059	unprocessed_pseudogene		7	1	44071860	777
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000173295	retained_intron		10	1	67096405	651
ENSMUSG00000024667	protein_coding	Tmem216	ENSMUST00000237507	retained_intron		19	-1	10555736	1848
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000235596	nonsense_mediated_decay		19	-1	46962308	2788
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000097338	protein_coding	principal1	17	-1	35046726	2678
ENSMUSG00000024667	protein_coding	Tmem216	ENSMUST00000131205	retained_intron		19	-1	10555751	471
ENSMUSG00000017195	protein_coding	Zpbp2	ENSMUST00000081033	protein_coding		11	1	98551097	1300
ENSMUSG00000105954	TEC	Gm42793	ENSMUST00000199139	TEC		5	1	104435121	1252
ENSMUSG00000108498	unprocessed_pseudogene	Gm45026	ENSMUST00000205292	unprocessed_pseudogene		7	-1	44079050	833
ENSMUSG00000074358	protein_coding	Ccdc61	ENSMUST00000133506	nonsense_mediated_decay		7	-1	18892546	712
ENSMUSG00000020932	protein_coding	Gfap	ENSMUST00000067444	protein_coding	principal1	11	-1	102897131	2648
ENSMUSG00000108406	unprocessed_pseudogene	Klk1b15-ps	ENSMUST00000206273	unprocessed_pseudogene		7	1	44096165	715
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000172239	protein_coding		19	-1	47015153	3148
ENSMUSG00000101265	lincRNA	Gm29099	ENSMUST00000187370	lincRNA		1	1	92324510	760
ENSMUSG00000108517	unprocessed_pseudogene	Gm45125	ENSMUST00000206908	unprocessed_pseudogene		7	-1	44099510	151
ENSMUSG00000001105	protein_coding	Ift20	ENSMUST00000128788	protein_coding	principal1	11	1	78536361	1141
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000068916	protein_coding	principal1	8	1	25720037	1483
ENSMUSG00000020932	protein_coding	Gfap	ENSMUST00000127909	processed_transcript		11	-1	102900912	356
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000174731	processed_transcript		19	-1	46909575	1404
ENSMUSG00000074358	protein_coding	Ccdc61	ENSMUST00000135467	nonsense_mediated_decay		7	-1	18910398	1961
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000235926	nonsense_mediated_decay		19	-1	46962308	599
ENSMUSG00000074358	protein_coding	Ccdc61	ENSMUST00000206499	protein_coding		7	-1	18893959	864
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000236783	protein_coding		19	-1	46962308	325
ENSMUSG00000001105	protein_coding	Ift20	ENSMUST00000050366	protein_coding		11	1	78536428	735
ENSMUSG00000074358	protein_coding	Ccdc61	ENSMUST00000206595	retained_intron		7	-1	18892352	706
ENSMUSG00000020932	protein_coding	Gfap	ENSMUST00000077902	protein_coding		11	-1	102897200	2600
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000237639	nonsense_mediated_decay		19	-1	46962542	606
ENSMUSG00000074358	protein_coding	Ccdc61	ENSMUST00000150065	protein_coding		7	-1	18910398	611
ENSMUSG00000074358	protein_coding	Ccdc61	ENSMUST00000139077	protein_coding		7	-1	18910389	363
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000236924	protein_coding		19	-1	46962541	449
ENSMUSG00000058900	protein_coding	Rsl1	ENSMUST00000021997	protein_coding	principal1	13	1	67173182	2591
ENSMUSG00000028470	protein_coding	Hint2	ENSMUST00000151238	processed_transcript		4	-1	43656443	600
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000110040	protein_coding	principal1	13	-1	51793673	4472
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000235296	retained_intron		19	-1	46962308	1779
ENSMUSG00000028470	protein_coding	Hint2	ENSMUST00000130593	processed_transcript		4	-1	43656448	564
ENSMUSG00000118434	transcribed_unprocessed_pseudogene	Gm13301	ENSMUST00000238717	transcribed_unprocessed_pseudogene		4	1	42216908	843
ENSMUSG00000036327	protein_coding	Qsox2	ENSMUST00000036187	protein_coding	principal1	2	-1	26237525	2559
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000238106	protein_coding		19	-1	46962308	362
ENSMUSG00000096862	transcribed_unprocessed_pseudogene	Gm13301	ENSMUST00000121728	transcribed_unprocessed_pseudogene		4	1	42234014	2317
ENSMUSG00000028470	protein_coding	Hint2	ENSMUST00000134050	processed_transcript		4	-1	43654956	442
ENSMUSG00000025041	protein_coding	Nt5c2	ENSMUST00000237658	retained_intron		19	-1	46962308	635
ENSMUSG00000029270	protein_coding	Dipk1a	ENSMUST00000031198	protein_coding	principal1	5	-1	107987085	2721
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000077128	protein_coding	alternative1	18	-1	6135907	4431
ENSMUSG00000091542	processed_transcript	Gm17167	ENSMUST00000169242	processed_transcript		4	1	42206998	5054
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000021900	protein_coding	principal1	13	-1	51793747	4482
ENSMUSG00000083929	transcribed_unprocessed_pseudogene	Gm10600	ENSMUST00000117202	transcribed_unprocessed_pseudogene		4	1	42232136	1303
ENSMUSG00000028470	protein_coding	Hint2	ENSMUST00000134082	processed_transcript		4	-1	43654727	398
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000174026	nonsense_mediated_decay		17	-1	35033291	1743
ENSMUSG00000001105	protein_coding	Ift20	ENSMUST00000108275	protein_coding	principal1	11	1	78536443	582
ENSMUSG00000098977	antisense	Gm27196	ENSMUST00000184787	antisense		2	1	26206702	2582
ENSMUSG00000117814	lincRNA	Gm50431	ENSMUST00000236822	lincRNA		19	1	46881495	1945
ENSMUSG00000058900	protein_coding	Rsl1	ENSMUST00000225334	nonsense_mediated_decay		13	1	67173199	397
ENSMUSG00000029270	protein_coding	Dipk1a	ENSMUST00000145239	protein_coding		5	-1	107987033	884
ENSMUSG00000085679	processed_pseudogene	Gm16328	ENSMUST00000126985	processed_pseudogene		1	1	21390906	196
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182213	protein_coding		18	-1	6135960	4162
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000110039	protein_coding	principal1	13	-1	51734763	4415
ENSMUSG00000029270	protein_coding	Dipk1a	ENSMUST00000153172	protein_coding		5	-1	107972998	362
ENSMUSG00000066516	protein_coding	Klk1b21	ENSMUST00000085455	protein_coding	principal1	7	1	44102328	871
ENSMUSG00000114870	processed_pseudogene	Gm49646	ENSMUST00000225774	processed_pseudogene		13	1	67187098	222
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000174603	nonsense_mediated_decay		17	-1	35046542	2718
ENSMUSG00000071491	protein_coding	Vmn1r209	ENSMUST00000227038	protein_coding	principal1	13	-1	22809682	6461
ENSMUSG00000112943	processed_pseudogene	Gm18983	ENSMUST00000222884	processed_pseudogene		12	1	87480108	2729
ENSMUSG00000024668	protein_coding	Sdhaf2	ENSMUST00000025570	protein_coding	principal1	19	-1	10525115	2981
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000172536	nonsense_mediated_decay		17	-1	35046542	2630
ENSMUSG00000071491	protein_coding	Vmn1r209	ENSMUST00000227265	protein_coding	principal1	13	-1	22809682	6550
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000125511	retained_intron		13	-1	51714159	745
ENSMUSG00000108301	unprocessed_pseudogene	Gm45127	ENSMUST00000205984	unprocessed_pseudogene		7	-1	44109679	1015
ENSMUSG00000071491	protein_coding	Vmn1r209	ENSMUST00000095961	protein_coding	principal1	13	-1	22806518	939
ENSMUSG00000024668	protein_coding	Sdhaf2	ENSMUST00000235853	nonsense_mediated_decay		19	-1	10525156	2025
ENSMUSG00000001105	protein_coding	Ift20	ENSMUST00000137120	retained_intron		11	1	78536445	1167
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182559	protein_coding	principal4	18	-1	6136098	4265
ENSMUSG00000024668	protein_coding	Sdhaf2	ENSMUST00000235243	nonsense_mediated_decay		19	-1	10525092	997
ENSMUSG00000026048	protein_coding	Ercc5	ENSMUST00000188376	retained_intron		1	1	44147744	1779
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000062584	protein_coding		18	-1	6135892	2718
ENSMUSG00000024668	protein_coding	Sdhaf2	ENSMUST00000235446	retained_intron		19	-1	10525097	1228
ENSMUSG00000037628	protein_coding	Cdkn3	ENSMUST00000067426	protein_coding	principal1	14	1	46760541	917
ENSMUSG00000024668	protein_coding	Sdhaf2	ENSMUST00000237827	protein_coding		19	-1	10525182	1231
ENSMUSG00000001105	protein_coding	Ift20	ENSMUST00000152016	retained_intron		11	1	78536473	909
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000174317	protein_coding		10	1	67096492	3076
ENSMUSG00000024668	protein_coding	Sdhaf2	ENSMUST00000235486	retained_intron		19	-1	10517451	753
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182383	protein_coding	alternative1	18	-1	6135888	2500
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000138228	processed_transcript		13	-1	51748815	551
ENSMUSG00000114295	processed_pseudogene	Gm2534	ENSMUST00000226018	processed_pseudogene		13	1	101348752	430
ENSMUSG00000024668	protein_coding	Sdhaf2	ENSMUST00000235222	protein_coding		19	-1	10526142	817
ENSMUSG00000037979	protein_coding	Ccdc92	ENSMUST00000036206	protein_coding	principal1	5	-1	124862424	2473
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182343	retained_intron		18	-1	6034707	556
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000139865	processed_transcript		13	-1	51748919	591
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000150662	processed_transcript		13	-1	51752165	385
ENSMUSG00000024668	protein_coding	Sdhaf2	ENSMUST00000237847	processed_transcript		19	-1	10525122	675
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000139018	processed_transcript		13	-1	51754765	442
ENSMUSG00000037628	protein_coding	Cdkn3	ENSMUST00000227149	protein_coding		14	1	46760555	1952
ENSMUSG00000024668	protein_coding	Sdhaf2	ENSMUST00000236455	protein_coding		19	-1	10525158	3916
ENSMUSG00000037979	protein_coding	Ccdc92	ENSMUST00000135495	nonsense_mediated_decay		5	-1	124861883	809
ENSMUSG00000060177	protein_coding	Klk1b22	ENSMUST00000077528	protein_coding	principal1	7	1	44112673	855
ENSMUSG00000037979	protein_coding	Ccdc92	ENSMUST00000143268	protein_coding		5	-1	124851583	445
ENSMUSG00000028470	protein_coding	Hint2	ENSMUST00000030192	protein_coding	principal1	4	-1	43656466	610
ENSMUSG00000100733	lincRNA	4932411K12Rik	ENSMUST00000210384	lincRNA		13	1	101254294	1351
ENSMUSG00000035964	protein_coding	Tmem59l	ENSMUST00000045286	protein_coding	principal1	8	-1	70487358	1491
ENSMUSG00000027173	protein_coding	Depdc7	ENSMUST00000028595	protein_coding	principal1	2	-1	104742878	1801
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000146238	processed_transcript		13	-1	51756802	498
ENSMUSG00000037628	protein_coding	Cdkn3	ENSMUST00000228106	nonsense_mediated_decay		14	1	46760586	912
ENSMUSG00000100733	lincRNA	4932411K12Rik	ENSMUST00000209771	lincRNA		13	1	101254319	1323
ENSMUSG00000108796	unprocessed_pseudogene	Gm45126	ENSMUST00000206702	unprocessed_pseudogene		7	-1	44119801	960
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000146922	processed_transcript		13	-1	51756668	405
ENSMUSG00000100733	lincRNA	4932411K12Rik	ENSMUST00000190493	lincRNA		13	1	101397670	3156
ENSMUSG00000027173	protein_coding	Depdc7	ENSMUST00000144133	retained_intron		2	-1	104723155	491
ENSMUSG00000028470	protein_coding	Hint2	ENSMUST00000151514	processed_transcript		4	-1	43656448	692
ENSMUSG00000103437	TEC	Gm36994	ENSMUST00000192941	TEC		13	-1	101443251	492
ENSMUSG00000037628	protein_coding	Cdkn3	ENSMUST00000226621	processed_transcript		14	1	46760595	634
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000143396	processed_transcript		13	-1	51748726	441
ENSMUSG00000108403	unprocessed_pseudogene	Gm45122	ENSMUST00000206376	unprocessed_pseudogene		7	-1	44135543	784
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000139858	processed_transcript		13	-1	51777111	642
ENSMUSG00000035964	protein_coding	Tmem59l	ENSMUST00000210365	processed_transcript		8	-1	70487324	737
ENSMUSG00000028470	protein_coding	Hint2	ENSMUST00000155985	processed_transcript		4	-1	43655743	985
ENSMUSG00000021451	protein_coding	Sema4d	ENSMUST00000155896	processed_transcript		13	-1	51793664	443
ENSMUSG00000108797	unprocessed_pseudogene	Klk1b23-ps	ENSMUST00000206347	unprocessed_pseudogene		7	1	44132647	345
ENSMUSG00000116820	processed_pseudogene	Gm17928	ENSMUST00000231755	processed_pseudogene		16	1	44892296	564
ENSMUSG00000110052	TEC	1700020G03Rik	ENSMUST00000211264	TEC		8	1	70488181	889
ENSMUSG00000109991	processed_pseudogene	Gm6284	ENSMUST00000209609	processed_pseudogene		8	1	43158754	4287
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000174556	nonsense_mediated_decay		17	-1	35046745	2391
ENSMUSG00000027860	protein_coding	Vangl1	ENSMUST00000029453	protein_coding	principal1	3	-1	102204693	6531
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000173685	retained_intron		17	-1	35043767	279
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000165329	retained_intron		17	-1	35046525	1248
ENSMUSG00000062563	protein_coding	Cys1	ENSMUST00000156453	protein_coding	principal1	12	-1	24680908	1732
ENSMUSG00000027860	protein_coding	Vangl1	ENSMUST00000161021	protein_coding		3	-1	102166930	818
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000174741	retained_intron		17	-1	35046116	622
ENSMUSG00000101378	lincRNA	Gm28086	ENSMUST00000191586	lincRNA		1	-1	93124103	317
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182101	processed_transcript		18	-1	6092857	735
ENSMUSG00000019768	protein_coding	Esr1	ENSMUST00000105590	protein_coding	principal1	10	1	4611989	6339
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000173928	retained_intron		17	-1	35045011	855
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182921	protein_coding		18	-1	6111980	439
ENSMUSG00000047197	protein_coding	Gjd3	ENSMUST00000062931	protein_coding	principal1	11	-1	98983016	837
ENSMUSG00000007035	protein_coding	Msh5	ENSMUST00000172491	nonsense_mediated_decay		17	-1	35046520	591
ENSMUSG00000019768	protein_coding	Esr1	ENSMUST00000133985	retained_intron		10	1	4611996	2822
ENSMUSG00000090176	protein_coding	Cd200r2	ENSMUST00000102805	protein_coding	principal1	16	1	44867097	1750
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182614	processed_transcript		18	-1	6135970	668
ENSMUSG00000092550	antisense	Gm20496	ENSMUST00000173770	antisense		17	-1	34203952	523
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182322	processed_transcript		18	-1	6069940	595
ENSMUSG00000006315	protein_coding	Tmem147	ENSMUST00000207955	retained_intron		7	-1	30728484	605
ENSMUSG00000092550	antisense	Gm20496	ENSMUST00000172796	antisense		17	-1	34205449	371
ENSMUSG00000019768	protein_coding	Esr1	ENSMUST00000138828	retained_intron		10	1	4612013	2106
ENSMUSG00000034820	protein_coding	Cpsf7	ENSMUST00000235162	retained_intron		19	1	10525266	3124
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182038	protein_coding		18	-1	6135955	1435
ENSMUSG00000101522	processed_pseudogene	Gm7837	ENSMUST00000190873	processed_pseudogene		1	-1	92430532	412
ENSMUSG00000048960	protein_coding	Prex2	ENSMUST00000027056	protein_coding	principal1	1	1	10993465	11053
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000181989	processed_transcript		18	-1	6135941	679
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182178	processed_transcript		18	-1	6135935	435
ENSMUSG00000048960	protein_coding	Prex2	ENSMUST00000190935	retained_intron		1	1	10993518	3084
ENSMUSG00000041225	protein_coding	Arhgap12	ENSMUST00000182572	retained_intron		18	-1	6071097	2444
ENSMUSG00000027860	protein_coding	Vangl1	ENSMUST00000160226	retained_intron		3	-1	102166973	617
ENSMUSG00000019768	protein_coding	Esr1	ENSMUST00000067086	protein_coding	principal1	10	1	4612021	4344
ENSMUSG00000100473	unprocessed_pseudogene	Gm21804	ENSMUST00000190072	unprocessed_pseudogene		Y	1	28518281	693
ENSMUSG00000051378	protein_coding	Kif18b	ENSMUST00000021311	protein_coding	principal1	11	-1	102925124	3326
ENSMUSG00000062201	protein_coding	Prl3d3	ENSMUST00000073601	protein_coding	principal2	13	1	27156790	856
ENSMUSG00000027860	protein_coding	Vangl1	ENSMUST00000162361	processed_transcript		3	-1	102165940	472
ENSMUSG00000027860	protein_coding	Vangl1	ENSMUST00000159586	protein_coding		3	-1	102197905	592
ENSMUSG00000062201	protein_coding	Prl3d3	ENSMUST00000223958	protein_coding	alternative2	13	1	27156837	675
ENSMUSG00000051378	protein_coding	Kif18b	ENSMUST00000132502	processed_transcript		11	-1	102925088	382
ENSMUSG00000019768	protein_coding	Esr1	ENSMUST00000105588	protein_coding		10	1	4710155	2733
ENSMUSG00000048960	protein_coding	Prex2	ENSMUST00000189822	retained_intron		1	1	11098530	1517
ENSMUSG00000027860	protein_coding	Vangl1	ENSMUST00000161722	protein_coding		3	-1	102203881	341
ENSMUSG00000062563	protein_coding	Cys1	ENSMUST00000074163	nonsense_mediated_decay		12	-1	24681813	1856
ENSMUSG00000019768	protein_coding	Esr1	ENSMUST00000105589	protein_coding	principal1	10	1	4710155	2612
ENSMUSG00000048960	protein_coding	Prex2	ENSMUST00000187694	retained_intron		1	1	11140691	2949
ENSMUSG00000062563	protein_coding	Cys1	ENSMUST00000173145	nonsense_mediated_decay		12	-1	24681023	920
ENSMUSG00000062563	protein_coding	Cys1	ENSMUST00000163514	nonsense_mediated_decay		12	-1	24681023	880
ENSMUSG00000019768	protein_coding	Esr1	ENSMUST00000127145	processed_transcript		10	1	4712651	1356
ENSMUSG00000062563	protein_coding	Cys1	ENSMUST00000148477	processed_transcript		12	-1	24679947	790
ENSMUSG00000062563	protein_coding	Cys1	ENSMUST00000172771	protein_coding		12	-1	24680719	400
ENSMUSG00000026934	protein_coding	Lhx3	ENSMUST00000054099	protein_coding	alternative1	2	-1	26208289	2184
ENSMUSG00000027860	protein_coding	Vangl1	ENSMUST00000159388	protein_coding		3	-1	102203963	3207
ENSMUSG00000059981	protein_coding	Taok2	ENSMUST00000214525	protein_coding		7	-1	126871641	1943
ENSMUSG00000026934	protein_coding	Lhx3	ENSMUST00000127035	retained_intron		2	-1	26202866	1982
ENSMUSG00000027860	protein_coding	Vangl1	ENSMUST00000168312	protein_coding		3	-1	102203963	1740
ENSMUSG00000019768	protein_coding	Esr1	ENSMUST00000127934	processed_transcript		10	1	4922970	719
ENSMUSG00000019768	protein_coding	Esr1	ENSMUST00000137012	processed_transcript		10	1	4936526	1019
ENSMUSG00000062563	protein_coding	Cys1	ENSMUST00000189849	protein_coding	principal1	12	-1	24681795	1828
ENSMUSG00000029569	protein_coding	Tmem168	ENSMUST00000031554	protein_coding	principal1	6	-1	13608100	4587
ENSMUSG00000022855	protein_coding	Senp2	ENSMUST00000023561	protein_coding	principal1	16	1	22009484	4499
ENSMUSG00000029569	protein_coding	Tmem168	ENSMUST00000149123	protein_coding		6	-1	13608100	3337
ENSMUSG00000062563	protein_coding	Cys1	ENSMUST00000186602	protein_coding	principal1	12	-1	24681795	1757
ENSMUSG00000029569	protein_coding	Tmem168	ENSMUST00000127050	processed_transcript		6	-1	13607748	354
ENSMUSG00000029569	protein_coding	Tmem168	ENSMUST00000140750	processed_transcript		6	-1	13608005	439
ENSMUSG00000026934	protein_coding	Lhx3	ENSMUST00000028302	protein_coding	principal3	2	-1	26206575	2223
ENSMUSG00000083935	processed_pseudogene	Gm12294	ENSMUST00000119723	processed_pseudogene		11	-1	65037541	490
ENSMUSG00000029569	protein_coding	Tmem168	ENSMUST00000155179	processed_transcript		6	-1	13608044	401
ENSMUSG00000009580	protein_coding	Odam	ENSMUST00000129757	protein_coding	principal1	5	1	87885029	1370
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000124764	nonsense_mediated_decay		8	1	25720061	1419
ENSMUSG00000106160	TEC	Gm43610	ENSMUST00000199117	TEC		5	-1	28168840	365
ENSMUSG00000029569	protein_coding	Tmem168	ENSMUST00000146139	processed_transcript		6	-1	13608019	1084
ENSMUSG00000096520	protein_coding	Gm3376	ENSMUST00000186140	protein_coding	principal1	Y	1	3771673	1576
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000145678	nonsense_mediated_decay		8	1	25720061	1377
ENSMUSG00000029569	protein_coding	Tmem168	ENSMUST00000138637	processed_transcript		6	-1	13608027	326
ENSMUSG00000048960	protein_coding	Prex2	ENSMUST00000188189	nonsense_mediated_decay		1	1	11258067	726
ENSMUSG00000096520	protein_coding	Gm3376	ENSMUST00000180202	protein_coding	principal1	Y	1	3774805	1143
ENSMUSG00000048960	protein_coding	Prex2	ENSMUST00000187745	nonsense_mediated_decay		1	1	11258106	769
ENSMUSG00000026934	protein_coding	Lhx3	ENSMUST00000149637	retained_intron		2	-1	26203441	494
ENSMUSG00000057101	protein_coding	Zfp180	ENSMUST00000207002	protein_coding		7	1	24081924	3690
ENSMUSG00000026048	protein_coding	Ercc5	ENSMUST00000027214	protein_coding	principal1	1	1	44147847	3907
ENSMUSG00000048960	protein_coding	Prex2	ENSMUST00000189385	nonsense_mediated_decay		1	1	11263963	2449
ENSMUSG00000009580	protein_coding	Odam	ENSMUST00000113274	protein_coding	principal1	5	1	87885695	872
ENSMUSG00000101192	lincRNA	Gm29122	ENSMUST00000189609	lincRNA		Y	-1	28627952	1498
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000133117	nonsense_mediated_decay		8	1	25720064	2099
ENSMUSG00000048960	protein_coding	Prex2	ENSMUST00000188154	nonsense_mediated_decay		1	1	11283993	843
ENSMUSG00000101827	processed_pseudogene	Gm28686	ENSMUST00000187404	processed_pseudogene		1	-1	11224174	609
ENSMUSG00000114805	processed_pseudogene	Gm9626	ENSMUST00000223769	processed_pseudogene		13	1	67187387	791
ENSMUSG00000113372	processed_pseudogene	Gm18624	ENSMUST00000220966	processed_pseudogene		12	1	87485143	658
ENSMUSG00000101192	lincRNA	Gm29122	ENSMUST00000187696	lincRNA		Y	-1	28627499	621
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000139836	protein_coding		8	1	25720064	1539
ENSMUSG00000007891	protein_coding	Ctsd	ENSMUST00000151120	protein_coding	principal2	7	-1	142388038	2127
ENSMUSG00000101192	lincRNA	Gm29122	ENSMUST00000189313	lincRNA		Y	-1	28627499	437
ENSMUSG00000113805	protein_coding	Gm5788	ENSMUST00000220499	protein_coding	principal1	12	1	87494721	435
ENSMUSG00000101607	unprocessed_pseudogene	Gm28939	ENSMUST00000190351	unprocessed_pseudogene		Y	1	28667432	315
ENSMUSG00000079666	protein_coding	1700015F17Rik	ENSMUST00000128151	protein_coding		5	-1	5457378	291
ENSMUSG00000039095	protein_coding	En2	ENSMUST00000036177	protein_coding	principal1	5	1	28165694	3539
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000111123	protein_coding	alternative2	12	1	8674134	4984
ENSMUSG00000101418	unprocessed_pseudogene	Gm28983	ENSMUST00000186685	unprocessed_pseudogene		Y	1	28703951	614
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000209843	retained_intron		8	1	25720088	819
ENSMUSG00000099431	lincRNA	Gm28985	ENSMUST00000189261	lincRNA		Y	-1	28717247	356
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000138879	retained_intron		8	1	25720100	921
ENSMUSG00000007891	protein_coding	Ctsd	ENSMUST00000066401	protein_coding	alternative2	7	-1	142387857	1922
ENSMUSG00000057101	protein_coding	Zfp180	ENSMUST00000068975	protein_coding	principal1	7	1	24081924	3901
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000210624	retained_intron		8	1	25720212	1886
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000020915	protein_coding		12	1	8674145	3587
ENSMUSG00000061296	protein_coding	Vmn1r210	ENSMUST00000226294	protein_coding	principal1	13	-1	22831348	3500
ENSMUSG00000101837	unprocessed_pseudogene	Gm20810	ENSMUST00000188122	unprocessed_pseudogene		Y	1	28733498	696
ENSMUSG00000007891	protein_coding	Ctsd	ENSMUST00000153679	retained_intron		7	-1	142387819	591
ENSMUSG00000061296	protein_coding	Vmn1r210	ENSMUST00000226180	protein_coding	principal1	13	-1	22831348	3116
ENSMUSG00000061296	protein_coding	Vmn1r210	ENSMUST00000072044	protein_coding	principal1	13	-1	22828114	921
ENSMUSG00000076618	IG_J_gene	Ighj4	ENSMUST00000103427	IG_J_gene	principal1	12	-1	113428567	54
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000139120	retained_intron		8	1	25720338	2115
ENSMUSG00000057101	protein_coding	Zfp180	ENSMUST00000206184	nonsense_mediated_decay		7	1	24081947	827
ENSMUSG00000073879	unprocessed_pseudogene	Gm5859	ENSMUST00000165401	unprocessed_pseudogene		4	1	42236859	2324
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000209483	retained_intron		8	1	25720351	873
ENSMUSG00000110040	protein_coding	Gm49369	ENSMUST00000209263	protein_coding		7	-1	142380864	819
ENSMUSG00000057101	protein_coding	Zfp180	ENSMUST00000203854	protein_coding		7	1	24081954	3845
ENSMUSG00000079666	protein_coding	1700015F17Rik	ENSMUST00000115447	protein_coding	principal1	5	-1	5479143	710
ENSMUSG00000110040	protein_coding	Gm49369	ENSMUST00000133843	protein_coding	principal1	7	-1	142382667	833
ENSMUSG00000058748	protein_coding	Zfp958	ENSMUST00000202692	protein_coding	principal1	8	1	4613167	2364
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000138548	nonsense_mediated_decay		8	1	25720456	1287
ENSMUSG00000057101	protein_coding	Zfp180	ENSMUST00000206482	retained_intron		7	1	24097266	709
ENSMUSG00000067201	protein_coding	H2-M9	ENSMUST00000087165	protein_coding		17	-1	36642666	1125
ENSMUSG00000111506	processed_pseudogene	Gm48848	ENSMUST00000216550	processed_pseudogene		9	1	17719063	111
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000209373	retained_intron		8	1	25720458	313
ENSMUSG00000111613	processed_pseudogene	Gm4977	ENSMUST00000215709	processed_pseudogene		9	1	17732670	1262
ENSMUSG00000058748	protein_coding	Zfp958	ENSMUST00000073201	protein_coding		8	1	4625840	1401
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000111122	protein_coding	alternative2	12	1	8674224	6311
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000210629	protein_coding		8	1	25720588	1023
ENSMUSG00000034820	protein_coding	Cpsf7	ENSMUST00000237321	protein_coding	principal1	19	1	10525266	1760
ENSMUSG00000028530	protein_coding	Jak1	ENSMUST00000102781	protein_coding	principal1	4	-1	101265282	4906
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000209375	retained_intron		8	1	25721981	850
ENSMUSG00000079666	protein_coding	1700015F17Rik	ENSMUST00000156282	nonsense_mediated_decay		5	-1	5479080	1050
ENSMUSG00000031570	protein_coding	Plpp5	ENSMUST00000146762	retained_intron		8	1	25722958	525
ENSMUSG00000108703	antisense	Gm44793	ENSMUST00000136923	antisense		7	-1	24116600	582
ENSMUSG00000085321	lincRNA	4930412F09Rik	ENSMUST00000139006	lincRNA		6	1	30896899	1017
ENSMUSG00000034820	protein_coding	Cpsf7	ENSMUST00000236206	nonsense_mediated_decay		19	1	10525266	3315
ENSMUSG00000028530	protein_coding	Jak1	ENSMUST00000147211	processed_transcript		4	-1	101185450	2039
ENSMUSG00000101016	processed_pseudogene	Gm2325	ENSMUST00000186637	processed_pseudogene		Y	-1	3804701	581
ENSMUSG00000067201	protein_coding	H2-M9	ENSMUST00000087167	protein_coding	principal1	17	-1	36642666	1070
ENSMUSG00000039032	protein_coding	Tsga13	ENSMUST00000202703	processed_transcript		6	-1	30903459	631
ENSMUSG00000007880	protein_coding	Arid1a	ENSMUST00000145664	protein_coding	alternative2	4	-1	133753611	8187
ENSMUSG00000026048	protein_coding	Ercc5	ENSMUST00000131177	retained_intron		1	1	44147847	4239
ENSMUSG00000028530	protein_coding	Jak1	ENSMUST00000136167	processed_transcript		4	-1	101185425	589
ENSMUSG00000026048	protein_coding	Ercc5	ENSMUST00000139510	processed_transcript		1	1	44147909	532
ENSMUSG00000085962	antisense	Gm16984	ENSMUST00000130003	antisense		13	1	34963982	982
ENSMUSG00000052675	protein_coding	Zfp112	ENSMUST00000120006	protein_coding	alternative2	7	1	24112314	3464
ENSMUSG00000026048	protein_coding	Ercc5	ENSMUST00000145406	processed_transcript		1	1	44147932	494
ENSMUSG00000034820	protein_coding	Cpsf7	ENSMUST00000038379	protein_coding	principal1	19	1	10525266	3500
ENSMUSG00000028530	protein_coding	Jak1	ENSMUST00000125968	processed_transcript		4	-1	101265226	374
ENSMUSG00000007880	protein_coding	Arid1a	ENSMUST00000008024	protein_coding	alternative2	4	-1	133756769	6486
ENSMUSG00000085962	antisense	Gm16984	ENSMUST00000170747	antisense		13	1	34964005	375
ENSMUSG00000026048	protein_coding	Ercc5	ENSMUST00000137380	retained_intron		1	1	44156935	1060
ENSMUSG00000085962	antisense	Gm16984	ENSMUST00000171079	antisense		13	1	34964058	525
ENSMUSG00000034820	protein_coding	Cpsf7	ENSMUST00000235674	protein_coding		19	1	10525404	703
ENSMUSG00000026048	protein_coding	Ercc5	ENSMUST00000155862	retained_intron		1	1	44158830	956
ENSMUSG00000028530	protein_coding	Jak1	ENSMUST00000132292	processed_transcript		4	-1	101265223	778
ENSMUSG00000028530	protein_coding	Jak1	ENSMUST00000149297	protein_coding		4	-1	101265273	421
ENSMUSG00000007880	protein_coding	Arid1a	ENSMUST00000138473	retained_intron		4	-1	133753982	3964
ENSMUSG00000034820	protein_coding	Cpsf7	ENSMUST00000236706	nonsense_mediated_decay		19	1	10531819	652
ENSMUSG00000028530	protein_coding	Jak1	ENSMUST00000155328	processed_transcript		4	-1	101265281	671
ENSMUSG00000007880	protein_coding	Arid1a	ENSMUST00000168582	retained_intron		4	-1	133720776	521
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000169177	processed_transcript		12	1	8674259	518
ENSMUSG00000028530	protein_coding	Jak1	ENSMUST00000151235	processed_transcript		4	-1	101155119	504
ENSMUSG00000034820	protein_coding	Cpsf7	ENSMUST00000238102	nonsense_mediated_decay		19	1	10531827	643
ENSMUSG00000007880	protein_coding	Arid1a	ENSMUST00000139709	protein_coding		4	-1	133723879	1262
ENSMUSG00000052675	protein_coding	Zfp112	ENSMUST00000005413	protein_coding	principal2	7	1	24112324	3044
ENSMUSG00000024339	protein_coding	Tap2	ENSMUST00000025197	protein_coding	principal1	17	1	34203527	3442
ENSMUSG00000034820	protein_coding	Cpsf7	ENSMUST00000236154	retained_intron		19	1	10532389	615
ENSMUSG00000029304	protein_coding	Spp1	ENSMUST00000086833	protein_coding	alternative2	5	1	104435118	1411
ENSMUSG00000006315	protein_coding	Tmem147	ENSMUST00000209065	protein_coding		7	-1	30729321	727
ENSMUSG00000090247	protein_coding	Bloc1s1	ENSMUST00000153731	protein_coding		10	-1	128923524	613
ENSMUSG00000052675	protein_coding	Zfp112	ENSMUST00000206878	retained_intron		7	1	24112360	2107
ENSMUSG00000052675	protein_coding	Zfp112	ENSMUST00000215113	protein_coding	alternative2	7	1	24118369	2628
ENSMUSG00000103397	unprocessed_pseudogene	Gm38306	ENSMUST00000193954	unprocessed_pseudogene		6	1	41406915	237
ENSMUSG00000024339	protein_coding	Tap2	ENSMUST00000138491	protein_coding		17	1	34204080	378
ENSMUSG00000039032	protein_coding	Tsga13	ENSMUST00000048580	protein_coding	principal1	6	-1	30915573	1141
ENSMUSG00000090247	protein_coding	Bloc1s1	ENSMUST00000026405	protein_coding	principal1	10	-1	128923524	550
ENSMUSG00000022855	protein_coding	Senp2	ENSMUST00000231724	nonsense_mediated_decay		16	1	22009512	2135
ENSMUSG00000007880	protein_coding	Arid1a	ENSMUST00000105897	protein_coding	principal2	4	-1	133753611	8175
ENSMUSG00000039032	protein_coding	Tsga13	ENSMUST00000201230	retained_intron		6	-1	30900492	593
ENSMUSG00000022855	protein_coding	Senp2	ENSMUST00000231408	retained_intron		16	1	22009535	1605
ENSMUSG00000029304	protein_coding	Spp1	ENSMUST00000031243	protein_coding	principal3	5	1	104435118	1410
ENSMUSG00000022517	protein_coding	Mgrn1	ENSMUST00000023159	protein_coding	alternative2	16	1	4886249	3095
ENSMUSG00000074444	protein_coding	Defa30	ENSMUST00000098898	protein_coding	principal1	8	1	21134642	398
ENSMUSG00000090247	protein_coding	Bloc1s1	ENSMUST00000131271	protein_coding		10	-1	128924035	475
ENSMUSG00000022855	protein_coding	Senp2	ENSMUST00000232679	nonsense_mediated_decay		16	1	22009561	2239
ENSMUSG00000118458	transcribed_unprocessed_pseudogene	Gm10599	ENSMUST00000238232	transcribed_unprocessed_pseudogene		4	1	42242630	2284
ENSMUSG00000090338	unprocessed_pseudogene	Gm17081	ENSMUST00000167363	unprocessed_pseudogene		4	1	42239725	2349
ENSMUSG00000024339	protein_coding	Tap2	ENSMUST00000127543	retained_intron		17	1	34204567	2561
ENSMUSG00000090247	protein_coding	Bloc1s1	ENSMUST00000141320	processed_transcript		10	-1	128923026	390
ENSMUSG00000022855	protein_coding	Senp2	ENSMUST00000231798	nonsense_mediated_decay		16	1	22009653	2883
ENSMUSG00000090247	protein_coding	Bloc1s1	ENSMUST00000143628	retained_intron		10	-1	128923524	361
ENSMUSG00000083297	unprocessed_pseudogene	Vmn1r-ps114	ENSMUST00000121050	unprocessed_pseudogene		13	-1	22846033	1040
ENSMUSG00000024339	protein_coding	Tap2	ENSMUST00000131105	protein_coding		17	1	34205100	376
ENSMUSG00000029304	protein_coding	Spp1	ENSMUST00000112748	protein_coding	principal3	5	1	104435121	1456
ENSMUSG00000028944	protein_coding	Prkag2	ENSMUST00000030784	protein_coding	principal3	5	-1	25100642	3331
ENSMUSG00000022855	protein_coding	Senp2	ENSMUST00000231632	protein_coding		16	1	22009799	181
ENSMUSG00000024339	protein_coding	Tap2	ENSMUST00000145528	processed_transcript		17	1	34207706	344
ENSMUSG00000029304	protein_coding	Spp1	ENSMUST00000112746	protein_coding		5	1	104435139	669
ENSMUSG00000029304	protein_coding	Spp1	ENSMUST00000145084	protein_coding		5	1	104435142	634
ENSMUSG00000022855	protein_coding	Senp2	ENSMUST00000232534	protein_coding		16	1	22009803	683
ENSMUSG00000081512	macro_lncRNA	Gm15821	ENSMUST00000121995	macro_lncRNA		17	-1	34214459	1210
ENSMUSG00000035258	protein_coding	Abi3bp	ENSMUST00000096013	protein_coding	alternative2	16	1	56477900	3630
ENSMUSG00000029304	protein_coding	Spp1	ENSMUST00000132457	protein_coding		5	1	104435158	354
ENSMUSG00000054986	protein_coding	Sec14l3	ENSMUST00000068322	protein_coding	principal1	11	1	4064841	2686
ENSMUSG00000022855	protein_coding	Senp2	ENSMUST00000232263	nonsense_mediated_decay		16	1	22028559	3702
ENSMUSG00000087270	processed_pseudogene	Gm12983	ENSMUST00000120974	processed_pseudogene		4	-1	135290675	310
ENSMUSG00000104985	antisense	Gm42917	ENSMUST00000200668	antisense		5	1	121384010	928
ENSMUSG00000029304	protein_coding	Spp1	ENSMUST00000112747	protein_coding	principal3	5	1	104436192	1507
ENSMUSG00000082833	processed_pseudogene	Gm12982	ENSMUST00000117408	processed_pseudogene		4	-1	135307970	190
ENSMUSG00000054986	protein_coding	Sec14l3	ENSMUST00000129330	retained_intron		11	1	4064891	678
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000165293	nonsense_mediated_decay		12	1	8674275	6218
ENSMUSG00000039133	antisense	9330171B17Rik	ENSMUST00000035939	antisense		7	1	79710283	2073
ENSMUSG00000025350	protein_coding	Rdh5	ENSMUST00000026406	protein_coding	principal1	10	-1	128919297	1258
ENSMUSG00000085002	antisense	Gm12984	ENSMUST00000145711	antisense		4	1	135307349	273
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000239017	protein_coding		12	1	111758849	4089
ENSMUSG00000039133	antisense	9330171B17Rik	ENSMUST00000197011	antisense		7	1	79710371	1987
ENSMUSG00000082836	processed_pseudogene	Gm13612	ENSMUST00000119276	processed_pseudogene		2	1	68831017	390
ENSMUSG00000054986	protein_coding	Sec14l3	ENSMUST00000123208	processed_transcript		11	1	4064952	1055
ENSMUSG00000054986	protein_coding	Sec14l3	ENSMUST00000125898	processed_transcript		11	1	4064952	1028
ENSMUSG00000109667	lincRNA	Gm36231	ENSMUST00000211183	lincRNA		2	-1	68845252	217
ENSMUSG00000054986	protein_coding	Sec14l3	ENSMUST00000126396	processed_transcript		11	1	4071409	773
ENSMUSG00000025350	protein_coding	Rdh5	ENSMUST00000137747	protein_coding		10	-1	128918052	463
ENSMUSG00000042726	protein_coding	Trafd1	ENSMUST00000133138	retained_intron		5	-1	121373131	1217
ENSMUSG00000025350	protein_coding	Rdh5	ENSMUST00000139217	retained_intron		10	-1	128914623	580
ENSMUSG00000100233	unprocessed_pseudogene	Gm20811	ENSMUST00000190500	unprocessed_pseudogene		Y	-1	28828210	553
ENSMUSG00000042268	protein_coding	Slc26a9	ENSMUST00000049027	protein_coding	principal1	1	1	131744022	4739
ENSMUSG00000006315	protein_coding	Tmem147	ENSMUST00000207779	nonsense_mediated_decay		7	-1	30729507	774
ENSMUSG00000025350	protein_coding	Rdh5	ENSMUST00000149961	protein_coding		10	-1	128919272	619
ENSMUSG00000020375	protein_coding	Rufy1	ENSMUST00000020643	protein_coding	principal1	11	-1	50431125	2688
ENSMUSG00000028944	protein_coding	Prkag2	ENSMUST00000114975	protein_coding	alternative2	5	-1	24908469	2205
ENSMUSG00000025350	protein_coding	Rdh5	ENSMUST00000153935	retained_intron		10	-1	128919297	1329
ENSMUSG00000022517	protein_coding	Mgrn1	ENSMUST00000070658	protein_coding	principal3	16	1	4886252	3138
ENSMUSG00000042268	protein_coding	Slc26a9	ENSMUST00000186122	nonsense_mediated_decay		1	1	131744038	1929
ENSMUSG00000025350	protein_coding	Rdh5	ENSMUST00000145616	protein_coding		10	-1	128918705	668
ENSMUSG00000006315	protein_coding	Tmem147	ENSMUST00000208169	protein_coding		7	-1	30729426	537
ENSMUSG00000013611	protein_coding	Snx31	ENSMUST00000013755	protein_coding	principal3	15	-1	36555573	2696
ENSMUSG00000035258	protein_coding	Abi3bp	ENSMUST00000048471	protein_coding	principal4	16	1	56477900	3822
ENSMUSG00000020375	protein_coding	Rufy1	ENSMUST00000135508	processed_transcript		11	-1	50414575	590
ENSMUSG00000006315	protein_coding	Tmem147	ENSMUST00000207296	protein_coding		7	-1	30729522	875
ENSMUSG00000035258	protein_coding	Abi3bp	ENSMUST00000231870	protein_coding	alternative2	16	1	56477900	3582
ENSMUSG00000042268	protein_coding	Slc26a9	ENSMUST00000130544	retained_intron		1	1	131750383	541
ENSMUSG00000025350	protein_coding	Rdh5	ENSMUST00000135161	protein_coding		10	-1	128922888	701
ENSMUSG00000035258	protein_coding	Abi3bp	ENSMUST00000171000	protein_coding	alternative2	16	1	56477900	3012
ENSMUSG00000013611	protein_coding	Snx31	ENSMUST00000161202	protein_coding	alternative2	15	-1	36555568	2344
ENSMUSG00000111161	processed_pseudogene	Gm48849	ENSMUST00000217305	processed_pseudogene		9	-1	17785787	480
ENSMUSG00000042268	protein_coding	Slc26a9	ENSMUST00000147800	protein_coding		1	1	131750491	644
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000084941	protein_coding	principal3	12	1	111758849	2504
ENSMUSG00000111263	processed_pseudogene	Gm7680	ENSMUST00000216198	processed_pseudogene		9	1	18022224	1348
ENSMUSG00000019997	protein_coding	Ccn2	ENSMUST00000020171	protein_coding	principal1	10	1	24595442	2398
ENSMUSG00000028944	protein_coding	Prkag2	ENSMUST00000076306	protein_coding	alternative1	5	-1	24995753	2838
ENSMUSG00000020375	protein_coding	Rufy1	ENSMUST00000129304	processed_transcript		11	-1	50421991	809
ENSMUSG00000111728	processed_pseudogene	Gm48850	ENSMUST00000216330	processed_pseudogene		9	1	18088045	312
ENSMUSG00000082978	processed_pseudogene	Rpsa-ps11	ENSMUST00000118446	processed_pseudogene		4	-1	59163156	889
ENSMUSG00000035258	protein_coding	Abi3bp	ENSMUST00000231781	protein_coding	alternative2	16	1	56477900	5196
ENSMUSG00000013611	protein_coding	Snx31	ENSMUST00000162888	retained_intron		15	-1	36545687	340
ENSMUSG00000111743	unprocessed_pseudogene	Gm48856	ENSMUST00000215459	unprocessed_pseudogene		9	1	18097955	326
ENSMUSG00000019997	protein_coding	Ccn2	ENSMUST00000176228	protein_coding		10	1	24595726	2490
ENSMUSG00000022517	protein_coding	Mgrn1	ENSMUST00000229038	protein_coding	alternative2	16	1	4886268	2250
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000163569	protein_coding	principal3	12	1	8674421	3560
ENSMUSG00000111870	processed_pseudogene	Gm7692	ENSMUST00000213534	processed_pseudogene		9	-1	18289860	409
ENSMUSG00000013611	protein_coding	Snx31	ENSMUST00000160936	processed_transcript		15	-1	36546145	430
ENSMUSG00000028944	protein_coding	Prkag2	ENSMUST00000135525	retained_intron		5	-1	24871753	651
ENSMUSG00000006315	protein_coding	Tmem147	ENSMUST00000006478	protein_coding	principal1	7	-1	30729540	870
ENSMUSG00000019997	protein_coding	Ccn2	ENSMUST00000129142	protein_coding		10	1	24595780	343
ENSMUSG00000001943	protein_coding	Vsig2	ENSMUST00000002008	protein_coding	principal1	9	1	37539255	1166
ENSMUSG00000087400	processed_transcript	Gm15270	ENSMUST00000146208	processed_transcript		10	-1	24550340	797
ENSMUSG00000028944	protein_coding	Prkag2	ENSMUST00000150135	protein_coding		5	-1	24908509	890
ENSMUSG00000103013	TEC	Gm37503	ENSMUST00000192088	TEC		1	-1	74287860	319
ENSMUSG00000035275	protein_coding	Raver2	ENSMUST00000038463	protein_coding	principal2	4	1	101068983	4045
ENSMUSG00000022517	protein_coding	Mgrn1	ENSMUST00000230990	protein_coding	alternative2	16	1	4886386	2519
ENSMUSG00000076619	IG_J_gene	Ighj3	ENSMUST00000103428	IG_J_gene	principal1	12	-1	113429132	48
ENSMUSG00000006315	protein_coding	Tmem147	ENSMUST00000207263	nonsense_mediated_decay		7	-1	30729509	835
ENSMUSG00000035258	protein_coding	Abi3bp	ENSMUST00000096012	protein_coding	alternative2	16	1	56477900	4340
ENSMUSG00000001943	protein_coding	Vsig2	ENSMUST00000215957	protein_coding		9	1	37539291	851
ENSMUSG00000042726	protein_coding	Trafd1	ENSMUST00000156158	nonsense_mediated_decay		5	-1	121378823	3083
ENSMUSG00000099931	sense_intronic	Gm29358	ENSMUST00000186510	sense_intronic		1	1	74295603	1734
ENSMUSG00000022517	protein_coding	Mgrn1	ENSMUST00000230220	processed_transcript		16	1	4913211	323
ENSMUSG00000035275	protein_coding	Raver2	ENSMUST00000106955	protein_coding	alternative2	4	1	101068983	2893
ENSMUSG00000099931	sense_intronic	Gm29358	ENSMUST00000187941	sense_intronic		1	1	74295641	3227
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000118471	protein_coding		12	1	111758956	2272
ENSMUSG00000103403	TEC	Gm37931	ENSMUST00000194686	TEC		1	1	74307848	2866
ENSMUSG00000087400	processed_transcript	Gm15270	ENSMUST00000136908	processed_transcript		10	-1	24595817	468
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000169089	protein_coding	alternative2	12	1	8674470	3295
ENSMUSG00000087400	processed_transcript	Gm15270	ENSMUST00000141076	processed_transcript		10	-1	24593758	370
ENSMUSG00000028944	protein_coding	Prkag2	ENSMUST00000131486	protein_coding		5	-1	24902315	723
ENSMUSG00000113589	TEC	Gm48374	ENSMUST00000221835	TEC		13	1	8870341	1765
ENSMUSG00000001943	protein_coding	Vsig2	ENSMUST00000215271	protein_coding		9	1	37539294	891
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000161739	protein_coding	principal3	6	-1	122339658	3893
ENSMUSG00000022517	protein_coding	Mgrn1	ENSMUST00000230653	retained_intron		16	1	4915463	670
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000169750	protein_coding		12	1	8674736	902
ENSMUSG00000035275	protein_coding	Raver2	ENSMUST00000148148	processed_transcript		4	1	101069479	1444
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000163730	protein_coding		12	1	8674765	648
ENSMUSG00000114094	TEC	Gm48375	ENSMUST00000220930	TEC		13	-1	8834372	1274
ENSMUSG00000076620	IG_J_gene	Ighj2	ENSMUST00000192746	IG_J_gene	principal1	12	-1	113429515	48
ENSMUSG00000024338	protein_coding	Psmb8	ENSMUST00000173441	protein_coding		17	1	34197721	840
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000166965	protein_coding		12	1	8677534	472
ENSMUSG00000001943	protein_coding	Vsig2	ENSMUST00000213502	retained_intron		9	1	37541272	501
ENSMUSG00000092225	protein_coding	Gm2381	ENSMUST00000174558	protein_coding	principal1	7	-1	42867234	4073
ENSMUSG00000001943	protein_coding	Vsig2	ENSMUST00000213699	protein_coding		9	1	37541479	669
ENSMUSG00000028944	protein_coding	Prkag2	ENSMUST00000129022	retained_intron		5	-1	24889152	600
ENSMUSG00000087400	processed_transcript	Gm15270	ENSMUST00000125158	processed_transcript		10	-1	24597108	870
ENSMUSG00000022517	protein_coding	Mgrn1	ENSMUST00000230738	retained_intron		16	1	4927293	931
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000170037	nonsense_mediated_decay		12	1	8698096	994
ENSMUSG00000081259	processed_pseudogene	Gm6893	ENSMUST00000118385	processed_pseudogene		10	-1	24568134	522
ENSMUSG00000099843	lincRNA	Gm7160	ENSMUST00000185535	lincRNA		1	-1	105990282	471
ENSMUSG00000001943	protein_coding	Vsig2	ENSMUST00000215710	retained_intron		9	1	37541998	582
ENSMUSG00000038150	protein_coding	Ormdl3	ENSMUST00000052919	protein_coding	principal1	11	-1	98587368	2184
ENSMUSG00000028944	protein_coding	Prkag2	ENSMUST00000139698	retained_intron		5	-1	24908452	2010
ENSMUSG00000022517	protein_coding	Mgrn1	ENSMUST00000230108	processed_transcript		16	1	4927678	844
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000171418	protein_coding		12	1	8710226	706
ENSMUSG00000109489	processed_pseudogene	Gm7451	ENSMUST00000208382	processed_pseudogene		8	1	4641466	1392
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000164818	protein_coding		12	1	8729147	665
ENSMUSG00000099843	lincRNA	Gm7160	ENSMUST00000188519	lincRNA		1	-1	105990252	1027
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000122300	protein_coding	alternative1	12	1	111759013	2268
ENSMUSG00000118425	transcribed_unprocessed_pseudogene	Gm50470	ENSMUST00000238732	transcribed_unprocessed_pseudogene		4	1	42245504	1846
ENSMUSG00000028944	protein_coding	Prkag2	ENSMUST00000123749	protein_coding		5	-1	24908977	211
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000171608	retained_intron		12	1	8743476	612
ENSMUSG00000043024	processed_pseudogene	Gm16433	ENSMUST00000062429	processed_pseudogene		6	-1	108565588	1984
ENSMUSG00000028944	protein_coding	Prkag2	ENSMUST00000148531	processed_transcript		5	-1	24908450	458
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000111375	protein_coding	alternative2	2	-1	91179317	5706
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000160696	protein_coding	principal3	6	-1	122338864	4213
ENSMUSG00000063998	protein_coding	Vmn1r211	ENSMUST00000228645	protein_coding	principal1	13	-1	22857561	5447
ENSMUSG00000026455	protein_coding	Klhl12	ENSMUST00000133721	retained_intron		1	1	134455531	3118
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000159252	protein_coding	alternative2	6	-1	122339656	3744
ENSMUSG00000063998	protein_coding	Vmn1r211	ENSMUST00000073728	protein_coding	principal1	13	-1	22852543	985
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000120544	protein_coding	alternative1	12	1	111772319	2261
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000178015	protein_coding	alternative2	12	1	8674134	5874
ENSMUSG00000024338	protein_coding	Psmb8	ENSMUST00000025196	protein_coding	principal1	17	1	34197790	1628
ENSMUSG00000072847	lincRNA	A530017D24Rik	ENSMUST00000148413	lincRNA		11	-1	61868058	1313
ENSMUSG00000052909	unprocessed_pseudogene	Gm9894	ENSMUST00000171257	unprocessed_pseudogene		13	-1	67773451	2904
ENSMUSG00000020594	protein_coding	Pum2	ENSMUST00000168361	protein_coding	principal3	12	1	8674681	6226
ENSMUSG00000072847	lincRNA	A530017D24Rik	ENSMUST00000101077	lincRNA		11	-1	61867269	2315
ENSMUSG00000095576	protein_coding	Fmo6	ENSMUST00000195576	nonsense_mediated_decay		1	-1	162937515	1957
ENSMUSG00000059981	protein_coding	Taok2	ENSMUST00000071268	protein_coding	alternative2	7	-1	126884703	4720
ENSMUSG00000109448	processed_pseudogene	Gm45224	ENSMUST00000208203	processed_pseudogene		8	1	4652064	414
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000134578	protein_coding		12	1	111781947	588
ENSMUSG00000082037	unprocessed_pseudogene	Vmn1r-ps116	ENSMUST00000121544	unprocessed_pseudogene		13	-1	22875393	292
ENSMUSG00000098196	lincRNA	Gm26964	ENSMUST00000182516	lincRNA		11	1	61865475	832
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000174408	protein_coding	alternative2	10	1	67127258	8377
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000161054	protein_coding	alternative2	6	-1	122339645	3612
ENSMUSG00000107409	processed_pseudogene	Gm43954	ENSMUST00000204634	processed_pseudogene		6	1	85092235	544
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000140792	retained_intron		12	1	111785269	416
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000219563	retained_intron		10	1	67185748	6003
ENSMUSG00000059981	protein_coding	Taok2	ENSMUST00000130371	retained_intron		7	-1	126867256	669
ENSMUSG00000107536	processed_pseudogene	Gm43955	ENSMUST00000204332	processed_pseudogene		6	1	85096927	142
ENSMUSG00000024338	protein_coding	Psmb8	ENSMUST00000237106	retained_intron		17	1	34198370	1484
ENSMUSG00000024338	protein_coding	Psmb8	ENSMUST00000236557	retained_intron		17	1	34198370	1234
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000124197	processed_transcript		12	1	111789322	227
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000173661	retained_intron		10	1	67185749	1579
ENSMUSG00000092551	unprocessed_pseudogene	Gm20287	ENSMUST00000172848	unprocessed_pseudogene		7	-1	9432927	2367
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000238980	retained_intron		12	1	111795180	1164
ENSMUSG00000022637	protein_coding	Cblb	ENSMUST00000114471	protein_coding	principal2	16	1	52031225	6648
ENSMUSG00000024338	protein_coding	Psmb8	ENSMUST00000238071	retained_intron		17	1	34198377	968
ENSMUSG00000059981	protein_coding	Taok2	ENSMUST00000117394	protein_coding	principal4	7	-1	126884703	4985
ENSMUSG00000092191	processed_pseudogene	Gm7211	ENSMUST00000172692	processed_pseudogene		7	1	42878596	1118
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000141435	retained_intron		12	1	111795352	806
ENSMUSG00000087623	processed_transcript	Gm12404	ENSMUST00000122839	processed_transcript		4	1	41520694	1661
ENSMUSG00000024338	protein_coding	Psmb8	ENSMUST00000172960	retained_intron		17	1	34198609	1907
ENSMUSG00000107925	processed_pseudogene	Gm43957	ENSMUST00000203606	processed_pseudogene		6	1	85102813	362
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000173689	protein_coding	alternative2	10	1	67185750	8609
ENSMUSG00000095576	protein_coding	Fmo6	ENSMUST00000178465	protein_coding	principal1	1	-1	162937218	1691
ENSMUSG00000024338	protein_coding	Psmb8	ENSMUST00000236331	protein_coding		17	1	34199354	358
ENSMUSG00000021288	protein_coding	Klc1	ENSMUST00000147203	retained_intron		12	1	111805504	968
ENSMUSG00000087341	antisense	0610040F04Rik	ENSMUST00000137478	antisense		6	-1	108660934	1734
ENSMUSG00000059981	protein_coding	Taok2	ENSMUST00000156273	retained_intron		7	-1	126882959	2892
ENSMUSG00000022637	protein_coding	Cblb	ENSMUST00000227062	protein_coding	principal2	16	1	52031563	3728
ENSMUSG00000087341	antisense	0610040F04Rik	ENSMUST00000204759	antisense		6	-1	108613995	544
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000173949	retained_intron		10	1	67185753	2574
ENSMUSG00000090576	processed_transcript	Gm17055	ENSMUST00000166951	lincRNA		6	1	108656917	2232
ENSMUSG00000095675	protein_coding	Ccl21b	ENSMUST00000178864	protein_coding	principal1	4	1	42255693	869
ENSMUSG00000092485	processed_pseudogene	Rpl9-ps5	ENSMUST00000174221	processed_pseudogene		17	1	36657056	571
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000173187	retained_intron		10	1	67217740	522
ENSMUSG00000090576	processed_transcript	Gm17055	ENSMUST00000204397	retained_intron		6	1	108657045	2493
ENSMUSG00000048484	TEC	Gm7461	ENSMUST00000058918	TEC		8	-1	4678365	827
ENSMUSG00000022637	protein_coding	Cblb	ENSMUST00000226593	protein_coding	alternative2	16	1	52031606	3864
ENSMUSG00000059832	protein_coding	Kprp	ENSMUST00000072363	protein_coding	principal1	3	-1	92827247	2729
ENSMUSG00000118243	antisense	Gm50203	ENSMUST00000236582	antisense		19	1	5295196	833
ENSMUSG00000071490	protein_coding	Vmn1r212	ENSMUST00000095960	protein_coding	principal1	13	-1	22884205	1164
ENSMUSG00000022637	protein_coding	Cblb	ENSMUST00000226253	retained_intron		16	1	52031645	3930
ENSMUSG00000076620	IG_J_gene	Ighj2	ENSMUST00000103429	processed_transcript		12	-1	113429567	54
ENSMUSG00000022637	protein_coding	Cblb	ENSMUST00000227879	protein_coding	alternative2	16	1	52032217	3866
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000160163	nonsense_mediated_decay		6	-1	122339612	3289
ENSMUSG00000118433	unprocessed_pseudogene	Gm50471	ENSMUST00000238652	unprocessed_pseudogene		4	1	42273497	324
ENSMUSG00000021287	protein_coding	Xrcc3	ENSMUST00000127281	nonsense_mediated_decay		12	-1	111812201	2300
ENSMUSG00000037334	protein_coding	H2-M1	ENSMUST00000041662	protein_coding	principal1	17	-1	36672219	1057
ENSMUSG00000020774	protein_coding	Aspa	ENSMUST00000021119	protein_coding	principal1	11	-1	73324634	1530
ENSMUSG00000114527	unprocessed_pseudogene	Vmn1r-ps117	ENSMUST00000224628	unprocessed_pseudogene		13	-1	22898738	605
ENSMUSG00000022637	protein_coding	Cblb	ENSMUST00000227756	protein_coding		16	1	52049653	3378
ENSMUSG00000097308	lincRNA	Gm6410	ENSMUST00000181337	lincRNA		8	1	4678462	1105
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000161877	retained_intron		6	-1	122339612	3530
ENSMUSG00000022637	protein_coding	Cblb	ENSMUST00000228247	processed_transcript		16	1	52152526	307
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000161290	nonsense_mediated_decay		6	-1	122336919	687
ENSMUSG00000096327	lincRNA	Gm21980	ENSMUST00000180032	lincRNA		4	-1	42293841	143
ENSMUSG00000105408	processed_pseudogene	Gm7285	ENSMUST00000198801	processed_pseudogene		5	1	137601593	580
ENSMUSG00000092298	unprocessed_pseudogene	Gm8877	ENSMUST00000172657	unprocessed_pseudogene		17	-1	36703209	655
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000160843	protein_coding		6	-1	122340506	970
ENSMUSG00000094264	unprocessed_pseudogene	Gm11320	ENSMUST00000119434	unprocessed_pseudogene		13	-1	22902824	463
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000173762	processed_transcript		10	1	67238148	2015
ENSMUSG00000024853	protein_coding	Sf3b2	ENSMUST00000237781	retained_intron		19	-1	5284408	1894
ENSMUSG00000109055	processed_pseudogene	Gm2676	ENSMUST00000207279	processed_pseudogene		8	1	4713207	606
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000173236	retained_intron		10	1	67238922	2365
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000160863	retained_intron		6	-1	122335145	410
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000159384	protein_coding		6	-1	122340224	424
ENSMUSG00000020774	protein_coding	Aspa	ENSMUST00000184572	protein_coding	principal1	11	-1	73329596	1746
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000161149	protein_coding		6	-1	122339708	377
ENSMUSG00000037876	protein_coding	Jmjd1c	ENSMUST00000051446	protein_coding	principal4	10	1	67127258	8382
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000159657	protein_coding		6	-1	122337296	566
ENSMUSG00000108919	protein_coding	Olfr1295	ENSMUST00000217772	protein_coding	principal1	2	-1	111569681	5539
ENSMUSG00000094695	protein_coding	Gm21953	ENSMUST00000238203	protein_coding	principal1	4	1	42293921	316
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000161210	protein_coding		6	-1	122339627	347
ENSMUSG00000020774	protein_coding	Aspa	ENSMUST00000155630	protein_coding		11	-1	73326477	733
ENSMUSG00000094695	protein_coding	Gm21953	ENSMUST00000108002	protein_coding	principal1	4	1	42294267	264
ENSMUSG00000108919	protein_coding	Olfr1295	ENSMUST00000207283	protein_coding	principal1	2	-1	111569681	1282
ENSMUSG00000021287	protein_coding	Xrcc3	ENSMUST00000021715	protein_coding	principal1	12	-1	111813841	2422
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000081849	protein_coding	alternative2	6	-1	122337015	3683
ENSMUSG00000108919	protein_coding	Olfr1295	ENSMUST00000207786	protein_coding	principal1	2	-1	111565511	1043
ENSMUSG00000020774	protein_coding	Aspa	ENSMUST00000132774	retained_intron		11	-1	73324337	4171
ENSMUSG00000020774	protein_coding	Aspa	ENSMUST00000134079	protein_coding		11	-1	73326807	544
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000079560	protein_coding	principal3	6	-1	122337015	3839
ENSMUSG00000112925	antisense	Gm31763	ENSMUST00000217788	antisense		10	1	67005020	673
ENSMUSG00000108766	TEC	Gm44760	ENSMUST00000206375	TEC		7	-1	127658234	1173
ENSMUSG00000020774	protein_coding	Aspa	ENSMUST00000141898	nonsense_mediated_decay		11	-1	73324614	581
ENSMUSG00000096690	unprocessed_pseudogene	Olfr1296-ps1	ENSMUST00000117697	unprocessed_pseudogene		2	-1	111594011	939
ENSMUSG00000076621	IG_J_gene	Ighj1	ENSMUST00000103430	IG_J_gene	principal1	12	-1	113429833	53
ENSMUSG00000112925	antisense	Gm31763	ENSMUST00000219739	antisense		10	1	67005075	1025
ENSMUSG00000040669	protein_coding	Phc1	ENSMUST00000112600	protein_coding	alternative2	6	-1	122340561	3127
ENSMUSG00000030103	protein_coding	Bhlhe40	ENSMUST00000032194	protein_coding	principal1	6	1	108660629	3113
ENSMUSG00000112925	antisense	Gm31763	ENSMUST00000218205	antisense		10	1	67028365	1724
ENSMUSG00000094028	IG_D_gene	Ighd4-1	ENSMUST00000179520	IG_D_gene	principal1	12	-1	113430538	11
ENSMUSG00000030103	protein_coding	Bhlhe40	ENSMUST00000166346	retained_intron		6	1	108660799	368
ENSMUSG00000113359	lincRNA	Gm48730	ENSMUST00000220746	lincRNA		13	1	95535590	482
ENSMUSG00000030103	protein_coding	Bhlhe40	ENSMUST00000163617	protein_coding		6	1	108660874	476
ENSMUSG00000094552	IG_D_gene	Ighd3-2	ENSMUST00000179883	IG_D_gene	principal1	12	-1	113448229	16
ENSMUSG00000113969	processed_pseudogene	Gm48731	ENSMUST00000221593	processed_pseudogene		13	-1	95578976	411
ENSMUSG00000030103	protein_coding	Bhlhe40	ENSMUST00000204550	retained_intron		6	1	108663046	2620
ENSMUSG00000102192	TEC	Gm38167	ENSMUST00000195704	TEC		6	-1	108595685	1178
ENSMUSG00000028629	protein_coding	Exo5	ENSMUST00000144114	protein_coding		4	-1	120922024	703
ENSMUSG00000021287	protein_coding	Xrcc3	ENSMUST00000124064	processed_transcript		12	-1	111812201	774
ENSMUSG00000021287	protein_coding	Xrcc3	ENSMUST00000146491	retained_intron		12	-1	111809982	535
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000115410	protein_coding	alternative2	18	1	52767709	3585
ENSMUSG00000113747	lincRNA	1700105G05Rik	ENSMUST00000222238	lincRNA		12	1	90969949	411
ENSMUSG00000021287	protein_coding	Xrcc3	ENSMUST00000145109	processed_transcript		12	-1	111813873	396
ENSMUSG00000025153	protein_coding	Fasn	ENSMUST00000055655	protein_coding	principal2	11	-1	120824547	10050
ENSMUSG00000102561	TEC	Gm37039	ENSMUST00000193733	TEC		1	1	60989479	2485
ENSMUSG00000021287	protein_coding	Xrcc3	ENSMUST00000132177	processed_transcript		12	-1	111812221	481
ENSMUSG00000048376	protein_coding	F2r	ENSMUST00000059193	protein_coding	principal1	13	-1	95618487	3336
ENSMUSG00000025153	protein_coding	Fasn	ENSMUST00000206589	protein_coding	alternative2	11	-1	120824095	8333
ENSMUSG00000021287	protein_coding	Xrcc3	ENSMUST00000129258	processed_transcript		12	-1	111813852	369
ENSMUSG00000021287	protein_coding	Xrcc3	ENSMUST00000133679	processed_transcript		12	-1	111812221	434
ENSMUSG00000028629	protein_coding	Exo5	ENSMUST00000030375	protein_coding	principal1	4	-1	120925005	1996
ENSMUSG00000021124	protein_coding	Vti1b	ENSMUST00000055262	protein_coding	principal1	12	-1	79172667	1490
ENSMUSG00000025153	protein_coding	Fasn	ENSMUST00000155276	retained_intron		11	-1	120808605	976
ENSMUSG00000027401	protein_coding	Tgm3	ENSMUST00000110299	protein_coding	principal1	2	1	130012349	4135
ENSMUSG00000025153	protein_coding	Fasn	ENSMUST00000146541	retained_intron		11	-1	120809701	762
ENSMUSG00000028629	protein_coding	Exo5	ENSMUST00000156836	protein_coding		4	-1	120925017	914
ENSMUSG00000025500	protein_coding	Lmntd2	ENSMUST00000026573	protein_coding	principal2	7	-1	141214077	2095
ENSMUSG00000025153	protein_coding	Fasn	ENSMUST00000206637	retained_intron		11	-1	120815455	713
ENSMUSG00000054196	protein_coding	Cthrc1	ENSMUST00000067072	protein_coding	principal1	15	1	39076932	1166
ENSMUSG00000028629	protein_coding	Exo5	ENSMUST00000177880	protein_coding	principal1	4	-1	120925005	1969
ENSMUSG00000025153	protein_coding	Fasn	ENSMUST00000205905	protein_coding		11	-1	120823780	636
ENSMUSG00000078716	protein_coding	Tmem8b	ENSMUST00000107865	protein_coding	principal1	4	1	43668971	4775
ENSMUSG00000102469	lincRNA	Gm38201	ENSMUST00000192143	lincRNA		3	-1	92843683	387
ENSMUSG00000026455	protein_coding	Klhl12	ENSMUST00000112232	protein_coding		1	1	134455531	3220
ENSMUSG00000108724	lincRNA	Gm44734	ENSMUST00000206025	lincRNA		7	1	73608948	237
ENSMUSG00000054196	protein_coding	Cthrc1	ENSMUST00000226433	protein_coding		15	1	39076956	596
ENSMUSG00000026272	protein_coding	Agxt	ENSMUST00000027491	protein_coding	principal1	1	1	93135240	1553
ENSMUSG00000054196	protein_coding	Cthrc1	ENSMUST00000132192	protein_coding		15	1	39077081	532
ENSMUSG00000028439	protein_coding	Fam219a	ENSMUST00000108049	protein_coding		4	-1	41569509	3296
ENSMUSG00000033106	protein_coding	Slc7a6os	ENSMUST00000035925	protein_coding	principal1	8	-1	106210933	1246
ENSMUSG00000078716	protein_coding	Tmem8b	ENSMUST00000167153	protein_coding	principal1	4	1	43669100	4101
ENSMUSG00000054196	protein_coding	Cthrc1	ENSMUST00000144800	retained_intron		15	1	39084070	912
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000019677	protein_coding	principal1	4	1	115839198	2543
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000059390	protein_coding		7	1	118740226	5097
ENSMUSG00000025500	protein_coding	Lmntd2	ENSMUST00000170841	protein_coding	alternative2	7	-1	141214080	2077
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000111369	protein_coding	alternative2	2	-1	91179326	5582
ENSMUSG00000046676	protein_coding	Lce1l	ENSMUST00000054426	protein_coding	principal1	3	-1	92851286	670
ENSMUSG00000021124	protein_coding	Vti1b	ENSMUST00000162789	nonsense_mediated_decay		12	-1	79172448	1059
ENSMUSG00000033106	protein_coding	Slc7a6os	ENSMUST00000212150	retained_intron		8	-1	106210935	2959
ENSMUSG00000026272	protein_coding	Agxt	ENSMUST00000191039	retained_intron		1	1	93135568	402
ENSMUSG00000078716	protein_coding	Tmem8b	ENSMUST00000107864	protein_coding	principal1	4	1	43669287	4726
ENSMUSG00000033106	protein_coding	Slc7a6os	ENSMUST00000212587	retained_intron		8	-1	106210933	1475
ENSMUSG00000021124	protein_coding	Vti1b	ENSMUST00000162569	protein_coding		12	-1	79165139	609
ENSMUSG00000028439	protein_coding	Fam219a	ENSMUST00000108052	protein_coding	principal1	4	-1	41569537	3357
ENSMUSG00000033106	protein_coding	Slc7a6os	ENSMUST00000212397	retained_intron		8	-1	106210925	1112
ENSMUSG00000050382	protein_coding	Kif7	ENSMUST00000183846	protein_coding	alternative2	7	-1	79715720	4577
ENSMUSG00000021124	protein_coding	Vti1b	ENSMUST00000163031	nonsense_mediated_decay		12	-1	79166368	623
ENSMUSG00000026455	protein_coding	Klhl12	ENSMUST00000027725	protein_coding	principal1	1	1	134455531	3408
ENSMUSG00000026272	protein_coding	Agxt	ENSMUST00000190603	processed_transcript		1	1	93139879	935
ENSMUSG00000094858	protein_coding	Olfr1297	ENSMUST00000213398	protein_coding	principal1	2	-1	111626497	6998
ENSMUSG00000111929	antisense	Gm48780	ENSMUST00000218917	antisense		12	-1	79151932	997
ENSMUSG00000026455	protein_coding	Klhl12	ENSMUST00000189981	retained_intron		1	1	134468879	4990
ENSMUSG00000102589	processed_pseudogene	Gm37445	ENSMUST00000195318	processed_pseudogene		3	1	46621121	242
ENSMUSG00000091507	processed_pseudogene	Gm17194	ENSMUST00000164610	processed_pseudogene		12	1	79168486	348
ENSMUSG00000020115	protein_coding	Tbk1	ENSMUST00000020316	protein_coding	principal1	10	-1	121586787	3024
ENSMUSG00000091534	processed_pseudogene	Gm17195	ENSMUST00000170289	processed_pseudogene		12	-1	79163835	428
ENSMUSG00000028439	protein_coding	Fam219a	ENSMUST00000108050	protein_coding		4	-1	41569537	3321
ENSMUSG00000094858	protein_coding	Olfr1297	ENSMUST00000099612	protein_coding	principal1	2	-1	111622072	939
ENSMUSG00000050382	protein_coding	Kif7	ENSMUST00000184137	protein_coding	principal3	7	-1	79715669	4093
ENSMUSG00000026455	protein_coding	Klhl12	ENSMUST00000141458	retained_intron		1	1	134475280	937
ENSMUSG00000054360	protein_coding	Bsx	ENSMUST00000067375	protein_coding	principal1	9	1	40874127	2960
ENSMUSG00000072387	processed_pseudogene	Gm10356	ENSMUST00000097152	processed_pseudogene		3	-1	47051639	1258
ENSMUSG00000078716	protein_coding	Tmem8b	ENSMUST00000107866	protein_coding		4	1	43669506	5102
ENSMUSG00000026455	protein_coding	Klhl12	ENSMUST00000116528	protein_coding	principal1	1	1	134455555	3277
ENSMUSG00000090314	protein_coding	2310050C09Rik	ENSMUST00000163439	protein_coding	principal1	3	-1	92870216	1078
ENSMUSG00000071890	protein_coding	Mroh9	ENSMUST00000096608	protein_coding	principal1	1	-1	163085670	2956
ENSMUSG00000078716	protein_coding	Tmem8b	ENSMUST00000134869	processed_transcript		4	1	43669556	1243
ENSMUSG00000078716	protein_coding	Tmem8b	ENSMUST00000143339	protein_coding		4	1	43669854	824
ENSMUSG00000078716	protein_coding	Tmem8b	ENSMUST00000143774	processed_transcript		4	1	43669915	521
ENSMUSG00000028439	protein_coding	Fam219a	ENSMUST00000130288	processed_transcript		4	-1	41524770	483
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000129334	processed_transcript		7	1	118740732	1552
ENSMUSG00000028439	protein_coding	Fam219a	ENSMUST00000146276	processed_transcript		4	-1	41569538	661
ENSMUSG00000050382	protein_coding	Kif7	ENSMUST00000178048	protein_coding	alternative2	7	-1	79714186	4524
ENSMUSG00000078716	protein_coding	Tmem8b	ENSMUST00000141864	processed_transcript		4	1	43674460	741
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000175922	protein_coding		7	1	118740747	1102
ENSMUSG00000050382	protein_coding	Kif7	ENSMUST00000059836	protein_coding	principal3	7	-1	79714186	4521
ENSMUSG00000078716	protein_coding	Tmem8b	ENSMUST00000154112	processed_transcript		4	1	43689690	584
ENSMUSG00000036162	antisense	Fam219aos	ENSMUST00000151164	antisense		4	1	41517437	708
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000106552	protein_coding		7	1	118740747	2810
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000106553	protein_coding		7	1	118740747	3018
ENSMUSG00000035540	protein_coding	Gc	ENSMUST00000049209	protein_coding	principal1	5	-1	89457898	1801
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000148586	retained_intron		7	1	118740749	1718
ENSMUSG00000035540	protein_coding	Gc	ENSMUST00000200534	protein_coding		5	-1	89435628	444
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000136623	retained_intron		7	1	118748197	548
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000208483	retained_intron		7	1	118752195	3388
ENSMUSG00000042369	protein_coding	Rbm45	ENSMUST00000046389	protein_coding	principal1	2	1	76369984	1898
ENSMUSG00000026009	protein_coding	Icos	ENSMUST00000027162	protein_coding	alternative2	1	1	60977927	810
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000146350	retained_intron		7	1	118752663	645
ENSMUSG00000020115	protein_coding	Tbk1	ENSMUST00000219400	nonsense_mediated_decay		10	-1	121586777	3005
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000178678	protein_coding	alternative2	18	1	52767710	3724
ENSMUSG00000020115	protein_coding	Tbk1	ENSMUST00000219439	retained_intron		10	-1	121552449	485
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000033280	protein_coding		7	1	118764124	2934
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000149749	protein_coding	principal1	7	1	118794577	608
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000025413	protein_coding	alternative2	18	1	52767994	3632
ENSMUSG00000020115	protein_coding	Tbk1	ENSMUST00000220386	retained_intron		10	-1	121554163	747
ENSMUSG00000114070	processed_pseudogene	Gm47727	ENSMUST00000221287	processed_pseudogene		13	1	20827836	481
ENSMUSG00000020115	protein_coding	Tbk1	ENSMUST00000218460	processed_transcript		10	-1	121564098	406
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000163742	protein_coding	principal3	18	1	52768090	3272
ENSMUSG00000020115	protein_coding	Tbk1	ENSMUST00000219244	retained_intron		10	-1	121568481	634
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000175730	retained_intron		7	1	118806832	408
ENSMUSG00000020115	protein_coding	Tbk1	ENSMUST00000219493	protein_coding		10	-1	121586741	442
ENSMUSG00000021125	protein_coding	Arg2	ENSMUST00000021550	protein_coding	principal1	12	1	79130777	1428
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000178011	protein_coding	principal3	18	1	52768121	3433
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000176197	retained_intron		7	1	118806991	786
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000131162	retained_intron		7	1	118821623	345
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000175952	processed_transcript		7	1	118824575	823
ENSMUSG00000005474	protein_coding	Myl10	ENSMUST00000196068	protein_coding		5	1	136693146	911
ENSMUSG00000030982	protein_coding	Vps35l	ENSMUST00000209103	retained_intron		7	1	118825704	3181
ENSMUSG00000108979	TEC	1700016B15Rik	ENSMUST00000209027	TEC		7	-1	118741181	733
ENSMUSG00000026009	protein_coding	Icos	ENSMUST00000102827	protein_coding	principal2	1	1	60977927	3241
ENSMUSG00000002944	protein_coding	Cd36	ENSMUST00000082367	protein_coding	principal1	5	-1	17835696	3016
ENSMUSG00000043633	protein_coding	Fam221b	ENSMUST00000056474	protein_coding	principal1	4	-1	43669141	2045
ENSMUSG00000109517	antisense	Gm44763	ENSMUST00000208287	antisense		7	-1	118969686	2019
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000144235	processed_transcript		4	1	115839198	2575
ENSMUSG00000042726	protein_coding	Trafd1	ENSMUST00000042312	protein_coding	principal4	5	-1	121385632	2503
ENSMUSG00000096420	IG_D_gene	Ighd5-6	ENSMUST00000195858	IG_D_gene	principal1	12	-1	113449597	10
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000144427	protein_coding		4	1	115839221	366
ENSMUSG00000096420	IG_D_gene	Ighd5-6	ENSMUST00000179932	processed_transcript		12	-1	113449599	12
ENSMUSG00000026915	protein_coding	Strbp	ENSMUST00000183690	nonsense_mediated_decay		2	-1	37647219	2940
ENSMUSG00000043633	protein_coding	Fam221b	ENSMUST00000134487	retained_intron		4	-1	43669145	3913
ENSMUSG00000043770	processed_pseudogene	Gm12481	ENSMUST00000102482	processed_pseudogene		4	1	43664043	297
ENSMUSG00000114400	lincRNA	Gm47533	ENSMUST00000224257	lincRNA		13	1	101545206	468
ENSMUSG00000026915	protein_coding	Strbp	ENSMUST00000203861	processed_transcript		2	-1	37594066	625
ENSMUSG00000025192	protein_coding	Entpd7	ENSMUST00000081079	protein_coding	principal1	19	1	43689672	5911
ENSMUSG00000026915	protein_coding	Strbp	ENSMUST00000204569	nonsense_mediated_decay		2	-1	37586518	355
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000153766	processed_transcript		4	1	115839223	1377
ENSMUSG00000114652	processed_transcript	Gm41043	ENSMUST00000225534	processed_transcript		13	-1	101548152	1234
ENSMUSG00000114652	processed_transcript	Gm41043	ENSMUST00000226049	retained_intron		13	-1	101548133	1736
ENSMUSG00000026691	protein_coding	Fmo3	ENSMUST00000028010	protein_coding	principal1	1	-1	162984527	2046
ENSMUSG00000006301	protein_coding	Tmbim1	ENSMUST00000016309	protein_coding	principal1	1	-1	74304405	2378
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000155412	processed_transcript		4	1	115839233	409
ENSMUSG00000025192	protein_coding	Entpd7	ENSMUST00000152786	retained_intron		19	1	43689809	1976
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000179038	protein_coding		18	1	52768732	404
ENSMUSG00000095656	IG_D_gene	Ighd2-8	ENSMUST00000180001	IG_D_gene	principal1	12	-1	113450867	17
ENSMUSG00000094957	IG_D_gene	Ighd5-5	ENSMUST00000178815	IG_D_gene	principal1	12	-1	113454951	10
ENSMUSG00000042726	protein_coding	Trafd1	ENSMUST00000120784	protein_coding	alternative2	5	-1	121385571	2425
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000130819	protein_coding		4	1	115839235	659
ENSMUSG00000025192	protein_coding	Entpd7	ENSMUST00000144314	retained_intron		19	1	43689840	1829
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000110354	protein_coding	alternative2	12	1	80945520	1489
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000177861	nonsense_mediated_decay		18	1	52837964	1905
ENSMUSG00000045463	transcribed_unprocessed_pseudogene	Slco6b1	ENSMUST00000167383	processed_transcript		1	-1	96997577	2492
ENSMUSG00000025192	protein_coding	Entpd7	ENSMUST00000134481	retained_intron		19	1	43711412	466
ENSMUSG00000045463	transcribed_unprocessed_pseudogene	Slco6b1	ENSMUST00000178359	transcribed_unprocessed_pseudogene		1	-1	96997237	1778
ENSMUSG00000026915	protein_coding	Strbp	ENSMUST00000072186	protein_coding	principal1	2	-1	37703275	3144
ENSMUSG00000025192	protein_coding	Entpd7	ENSMUST00000131293	retained_intron		19	1	43726367	709
ENSMUSG00000026691	protein_coding	Fmo3	ENSMUST00000142759	retained_intron		1	-1	162984528	1257
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000151203	protein_coding		4	1	115839240	679
ENSMUSG00000042726	protein_coding	Trafd1	ENSMUST00000202064	protein_coding		5	-1	121373474	890
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000178883	nonsense_mediated_decay		18	1	52837964	2383
ENSMUSG00000027905	protein_coding	Ddx20	ENSMUST00000090680	protein_coding	principal1	3	-1	105687574	2905
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000180259	nonsense_mediated_decay		18	1	52837964	2312
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000140315	protein_coding		4	1	115839244	415
ENSMUSG00000103288	antisense	Gm37273	ENSMUST00000195132	antisense		1	1	162983014	539
ENSMUSG00000026915	protein_coding	Strbp	ENSMUST00000135488	processed_transcript		2	-1	37703348	1355
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000179625	protein_coding		18	1	52838010	2568
ENSMUSG00000002944	protein_coding	Cd36	ENSMUST00000169095	protein_coding	principal1	5	-1	17888747	2677
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000140585	processed_transcript		4	1	115839260	650
ENSMUSG00000042726	protein_coding	Trafd1	ENSMUST00000152265	protein_coding		5	-1	121385409	627
ENSMUSG00000026915	protein_coding	Strbp	ENSMUST00000145808	protein_coding		2	-1	37657910	967
ENSMUSG00000024534	protein_coding	Sncaip	ENSMUST00000179689	protein_coding		18	1	52838010	1512
ENSMUSG00000092377	unprocessed_pseudogene	Gm20549	ENSMUST00000174804	unprocessed_pseudogene		17	1	36703775	429
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000152888	processed_transcript		4	1	115857032	1686
ENSMUSG00000026915	protein_coding	Strbp	ENSMUST00000155237	protein_coding		2	-1	37703859	746
ENSMUSG00000026915	protein_coding	Strbp	ENSMUST00000144206	processed_transcript		2	-1	37703149	398
ENSMUSG00000005474	protein_coding	Myl10	ENSMUST00000005611	protein_coding	principal1	5	1	136693178	688
ENSMUSG00000024853	protein_coding	Sf3b2	ENSMUST00000025774	protein_coding	principal1	19	-1	5295455	3222
ENSMUSG00000042726	protein_coding	Trafd1	ENSMUST00000155379	protein_coding		5	-1	121385577	434
ENSMUSG00000105151	lincRNA	Gm43241	ENSMUST00000198375	lincRNA		3	1	102249669	364
ENSMUSG00000103925	TEC	B230112G18Rik	ENSMUST00000192979	TEC		8	1	23208512	851
ENSMUSG00000027905	protein_coding	Ddx20	ENSMUST00000200078	nonsense_mediated_decay		3	-1	105687452	1264
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000150201	processed_transcript		4	1	115857106	788
ENSMUSG00000020549	protein_coding	Elac2	ENSMUST00000071891	protein_coding	principal2	11	1	64979038	2771
ENSMUSG00000092172	unprocessed_pseudogene	Gm20523	ENSMUST00000174340	unprocessed_pseudogene		17	-1	36706847	1124
ENSMUSG00000026915	protein_coding	Strbp	ENSMUST00000028279	protein_coding	principal1	2	-1	37647285	16348
ENSMUSG00000042726	protein_coding	Trafd1	ENSMUST00000146185	protein_coding		5	-1	121385629	344
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000154957	processed_transcript		4	1	115866267	332
ENSMUSG00000006301	protein_coding	Tmbim1	ENSMUST00000152603	retained_intron		1	-1	74295695	3311
ENSMUSG00000027905	protein_coding	Ddx20	ENSMUST00000132008	retained_intron		3	-1	105687444	2257
ENSMUSG00000092343	unprocessed_pseudogene	Gm20525	ENSMUST00000173464	unprocessed_pseudogene		17	1	36723234	48
ENSMUSG00000083985	processed_pseudogene	Gm12468	ENSMUST00000116189	processed_pseudogene		4	1	53877925	404
ENSMUSG00000107491	processed_pseudogene	Gm17893	ENSMUST00000203017	processed_pseudogene		2	1	37488675	770
ENSMUSG00000008734	protein_coding	Gprc5b	ENSMUST00000008878	protein_coding	principal3	7	-1	118995211	4518
ENSMUSG00000020099	protein_coding	Unc5b	ENSMUST00000077925	protein_coding	principal2	10	-1	60831581	5869
ENSMUSG00000042726	protein_coding	Trafd1	ENSMUST00000126550	processed_transcript		5	-1	121385360	356
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000135209	processed_transcript		4	1	115874771	681
ENSMUSG00000005474	protein_coding	Myl10	ENSMUST00000196436	protein_coding		5	1	136693676	598
ENSMUSG00000108226	processed_pseudogene	Gm44063	ENSMUST00000203307	processed_pseudogene		2	1	37659146	376
ENSMUSG00000028708	protein_coding	Mknk1	ENSMUST00000106513	protein_coding	principal1	4	1	115839233	2552
ENSMUSG00000086987	lincRNA	Gm12484	ENSMUST00000156311	lincRNA		4	-1	54163678	581
ENSMUSG00000024493	protein_coding	Lars	ENSMUST00000097590	protein_coding	principal1	18	-1	42262194	3980
ENSMUSG00000006301	protein_coding	Tmbim1	ENSMUST00000135384	retained_intron		1	-1	74304351	2546
ENSMUSG00000005474	protein_coding	Myl10	ENSMUST00000197186	protein_coding		5	1	136694177	607
ENSMUSG00000092435	unprocessed_pseudogene	Gm20526	ENSMUST00000173416	unprocessed_pseudogene		17	1	36723948	158
ENSMUSG00000053164	protein_coding	Gpr21	ENSMUST00000159737	processed_transcript		2	1	37516332	227
ENSMUSG00000083624	processed_pseudogene	Gm12469	ENSMUST00000117623	processed_pseudogene		4	-1	54235876	207
ENSMUSG00000100081	antisense	Gm29434	ENSMUST00000187426	antisense		4	-1	115878576	260
ENSMUSG00000006301	protein_coding	Tmbim1	ENSMUST00000113796	protein_coding	principal1	1	-1	74304361	11011
ENSMUSG00000086800	lincRNA	4930556L07Rik	ENSMUST00000134422	lincRNA		2	-1	151749978	1490
ENSMUSG00000106209	antisense	Gm42918	ENSMUST00000199249	antisense		5	1	121385522	1580
ENSMUSG00000113323	processed_pseudogene	Gm18625	ENSMUST00000222161	processed_pseudogene		12	1	87496093	271
ENSMUSG00000055531	protein_coding	Cpsf6	ENSMUST00000069168	protein_coding	principal3	10	-1	117376970	6526
ENSMUSG00000083088	processed_pseudogene	Gm14153	ENSMUST00000119923	processed_pseudogene		2	-1	151798245	1139
ENSMUSG00000008734	protein_coding	Gprc5b	ENSMUST00000208394	protein_coding	alternative2	7	-1	118984644	1416
ENSMUSG00000113614	processed_pseudogene	Gm49362	ENSMUST00000223131	processed_pseudogene		12	1	87507772	493
ENSMUSG00000109560	processed_pseudogene	Gm8463	ENSMUST00000208573	processed_pseudogene		7	1	100524016	613
ENSMUSG00000006301	protein_coding	Tmbim1	ENSMUST00000128505	protein_coding		1	-1	74291228	542
ENSMUSG00000115032	processed_pseudogene	Gm49301	ENSMUST00000227247	processed_pseudogene		15	-1	4244645	334
ENSMUSG00000008734	protein_coding	Gprc5b	ENSMUST00000207582	processed_transcript		7	-1	118975201	692
ENSMUSG00000024493	protein_coding	Lars	ENSMUST00000237587	nonsense_mediated_decay		18	-1	42228687	1759
ENSMUSG00000006301	protein_coding	Tmbim1	ENSMUST00000154859	processed_transcript		1	-1	74304215	499
ENSMUSG00000005474	protein_coding	Myl10	ENSMUST00000199074	retained_intron		5	1	136697779	522
ENSMUSG00000013701	protein_coding	Timm23	ENSMUST00000013845	protein_coding	principal1	14	-1	32201898	1173
ENSMUSG00000006301	protein_coding	Tmbim1	ENSMUST00000130763	protein_coding		1	-1	74305622	445
ENSMUSG00000020099	protein_coding	Unc5b	ENSMUST00000218316	processed_transcript		10	-1	60820641	5713
ENSMUSG00000005474	protein_coding	Myl10	ENSMUST00000197849	retained_intron		5	1	136697830	500
ENSMUSG00000020099	protein_coding	Unc5b	ENSMUST00000218637	protein_coding	alternative1	10	-1	60831382	3653
ENSMUSG00000053164	protein_coding	Gpr21	ENSMUST00000065441	protein_coding	principal1	2	1	37516626	3619
ENSMUSG00000044881	protein_coding	Coa4	ENSMUST00000208772	retained_intron		7	1	100537071	1329
ENSMUSG00000006301	protein_coding	Tmbim1	ENSMUST00000141560	protein_coding		1	-1	74304120	664
ENSMUSG00000024493	protein_coding	Lars	ENSMUST00000237882	retained_intron		18	-1	42215301	1071
ENSMUSG00000097985	processed_pseudogene	Gm5274	ENSMUST00000182641	processed_pseudogene		3	-1	47085734	1003
ENSMUSG00000079034	protein_coding	Gm8300	ENSMUST00000110152	protein_coding	principal1	12	1	87514316	1873
ENSMUSG00000008734	protein_coding	Gprc5b	ENSMUST00000207614	retained_intron		7	-1	118976782	686
ENSMUSG00000112592	TEC	Gm19972	ENSMUST00000218180	TEC		10	-1	60814323	5664
ENSMUSG00000102220	processed_pseudogene	Rpl23a-ps5	ENSMUST00000194566	processed_pseudogene		3	-1	47231003	466
ENSMUSG00000024493	protein_coding	Lars	ENSMUST00000235845	nonsense_mediated_decay		18	-1	42218646	470
ENSMUSG00000002944	protein_coding	Cd36	ENSMUST00000165232	protein_coding	principal1	5	-1	17849729	2708
ENSMUSG00000055531	protein_coding	Cpsf6	ENSMUST00000176686	protein_coding	alternative1	10	-1	117376973	2200
ENSMUSG00000044881	protein_coding	Coa4	ENSMUST00000054310	protein_coding	principal1	7	1	100537100	1391
ENSMUSG00000024853	protein_coding	Sf3b2	ENSMUST00000235368	retained_intron		19	-1	5286854	963
ENSMUSG00000053310	protein_coding	Nrgn	ENSMUST00000065668	protein_coding	principal1	9	-1	37552904	1453
ENSMUSG00000024853	protein_coding	Sf3b2	ENSMUST00000236695	retained_intron		19	-1	5291662	673
ENSMUSG00000109303	sense_intronic	Gm44549	ENSMUST00000208351	sense_intronic		7	1	118768017	577
ENSMUSG00000013701	protein_coding	Timm23	ENSMUST00000168139	processed_transcript		14	-1	32191957	875
ENSMUSG00000020549	protein_coding	Elac2	ENSMUST00000140369	processed_transcript		11	1	64979091	3329
ENSMUSG00000013701	protein_coding	Timm23	ENSMUST00000170331	protein_coding		14	-1	32201869	777
ENSMUSG00000024853	protein_coding	Sf3b2	ENSMUST00000235182	protein_coding		19	-1	5295403	933
ENSMUSG00000102909	lincRNA	Gm2453	ENSMUST00000195508	lincRNA		1	1	167285068	568
ENSMUSG00000024493	protein_coding	Lars	ENSMUST00000236226	retained_intron		18	-1	42230525	1300
ENSMUSG00000053310	protein_coding	Nrgn	ENSMUST00000182070	processed_transcript		9	-1	37546138	447
ENSMUSG00000020549	protein_coding	Elac2	ENSMUST00000101049	protein_coding	alternative2	11	1	64979074	2884
ENSMUSG00000024493	protein_coding	Lars	ENSMUST00000235432	nonsense_mediated_decay		18	-1	42262129	1672
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000133783	retained_intron		12	1	80945520	2919
ENSMUSG00000102909	lincRNA	Gm2453	ENSMUST00000193383	lincRNA		1	1	167285484	357
ENSMUSG00000055531	protein_coding	Cpsf6	ENSMUST00000176670	protein_coding	alternative1	10	-1	117376929	2227
ENSMUSG00000024853	protein_coding	Sf3b2	ENSMUST00000236014	retained_intron		19	-1	5294378	539
ENSMUSG00000024853	protein_coding	Sf3b2	ENSMUST00000235772	retained_intron		19	-1	5294894	2950
ENSMUSG00000020549	protein_coding	Elac2	ENSMUST00000132308	protein_coding		11	1	64985473	697
ENSMUSG00000024493	protein_coding	Lars	ENSMUST00000236826	retained_intron		18	-1	42244892	412
ENSMUSG00000013701	protein_coding	Timm23	ENSMUST00000226683	protein_coding		14	-1	32201846	750
ENSMUSG00000073856	protein_coding	Iqck	ENSMUST00000208658	protein_coding		7	1	118855752	2891
ENSMUSG00000020549	protein_coding	Elac2	ENSMUST00000108697	protein_coding	alternative2	11	1	64979071	2612
ENSMUSG00000103139	antisense	Gm37982	ENSMUST00000193076	antisense		1	1	167242457	561
ENSMUSG00000055531	protein_coding	Cpsf6	ENSMUST00000176480	nonsense_mediated_decay		10	-1	117360944	717
ENSMUSG00000044881	protein_coding	Coa4	ENSMUST00000120454	protein_coding	principal1	7	1	100537232	742
ENSMUSG00000024493	protein_coding	Lars	ENSMUST00000236102	protein_coding		18	-1	42262118	451
ENSMUSG00000013701	protein_coding	Timm23	ENSMUST00000163379	nonsense_mediated_decay		14	-1	32201846	682
ENSMUSG00000105966	lincRNA	Gm43242	ENSMUST00000199507	lincRNA		3	1	102369162	1776
ENSMUSG00000002944	protein_coding	Cd36	ENSMUST00000197890	protein_coding	principal1	5	-1	17835717	2564
ENSMUSG00000031546	protein_coding	Gins4	ENSMUST00000033950	protein_coding	principal1	8	-1	23237659	1349
ENSMUSG00000024853	protein_coding	Sf3b2	ENSMUST00000237512	retained_intron		19	-1	5295408	455
ENSMUSG00000020549	protein_coding	Elac2	ENSMUST00000128693	processed_transcript		11	1	65000336	475
ENSMUSG00000106459	processed_pseudogene	Gm43245	ENSMUST00000197603	processed_pseudogene		3	-1	102390007	468
ENSMUSG00000055531	protein_coding	Cpsf6	ENSMUST00000177145	protein_coding	principal3	10	-1	117376928	3819
ENSMUSG00000092520	unprocessed_pseudogene	Gm3611	ENSMUST00000173687	unprocessed_pseudogene		7	-1	9451256	877
ENSMUSG00000020549	protein_coding	Elac2	ENSMUST00000142574	processed_transcript		11	1	64979072	372
ENSMUSG00000013701	protein_coding	Timm23	ENSMUST00000172052	retained_intron		14	-1	32201828	538
ENSMUSG00000024493	protein_coding	Lars	ENSMUST00000236304	processed_transcript		18	-1	42262118	322
ENSMUSG00000055531	protein_coding	Cpsf6	ENSMUST00000175888	protein_coding		10	-1	117356056	449
ENSMUSG00000013701	protein_coding	Timm23	ENSMUST00000170233	retained_intron		14	-1	32201853	525
ENSMUSG00000002944	protein_coding	Cd36	ENSMUST00000197574	protein_coding		5	-1	17888801	702
ENSMUSG00000049148	protein_coding	Plcxd3	ENSMUST00000130332	processed_transcript		15	1	4375491	4212
ENSMUSG00000024493	protein_coding	Lars	ENSMUST00000237520	retained_intron		18	-1	42262091	452
ENSMUSG00000073856	protein_coding	Iqck	ENSMUST00000153518	retained_intron		7	1	118855760	2148
ENSMUSG00000013701	protein_coding	Timm23	ENSMUST00000168813	retained_intron		14	-1	32201879	441
ENSMUSG00000096699	processed_pseudogene	Rps19-ps4	ENSMUST00000091925	processed_pseudogene		18	1	42252398	438
ENSMUSG00000031835	protein_coding	Mbtps1	ENSMUST00000212601	retained_intron		8	-1	119558705	6789
ENSMUSG00000095526	processed_pseudogene	Gm10243	ENSMUST00000117571	processed_pseudogene		6	1	48523518	333
ENSMUSG00000055531	protein_coding	Cpsf6	ENSMUST00000176567	retained_intron		10	-1	117363233	2749
ENSMUSG00000105891	lincRNA	A230001M10Rik	ENSMUST00000196720	lincRNA		3	1	102262405	1307
ENSMUSG00000055531	protein_coding	Cpsf6	ENSMUST00000175924	protein_coding		10	-1	117380015	377
ENSMUSG00000046463	processed_transcript	5930403N24Rik	ENSMUST00000188813	retained_intron		10	1	37139402	3965
ENSMUSG00000040693	protein_coding	Slco4c1	ENSMUST00000071985	protein_coding	principal1	1	-1	96872171	4908
ENSMUSG00000049148	protein_coding	Plcxd3	ENSMUST00000061925	protein_coding	principal1	15	1	4375504	1851
ENSMUSG00000105891	lincRNA	A230001M10Rik	ENSMUST00000198712	lincRNA		3	1	102262522	1747
ENSMUSG00000046463	processed_transcript	5930403N24Rik	ENSMUST00000191067	lincRNA		10	1	37139914	1791
ENSMUSG00000002944	protein_coding	Cd36	ENSMUST00000170051	protein_coding	principal1	5	-1	17849792	3399
ENSMUSG00000074695	protein_coding	Il22	ENSMUST00000096691	protein_coding	principal1	10	1	118204942	1110
ENSMUSG00000105891	lincRNA	A230001M10Rik	ENSMUST00000196659	lincRNA		3	1	102262839	464
ENSMUSG00000046463	processed_transcript	5930403N24Rik	ENSMUST00000217338	lincRNA		10	1	37141089	337
ENSMUSG00000086545	protein_coding	Lrrc3c	ENSMUST00000142268	protein_coding	principal1	11	1	98598291	902
ENSMUSG00000094821	protein_coding	Gm21518	ENSMUST00000186938	protein_coding	principal5	Y	1	62190866	922
ENSMUSG00000046463	processed_transcript	5930403N24Rik	ENSMUST00000062667	processed_transcript		10	1	37139558	2122
ENSMUSG00000036330	protein_coding	Slc18a1	ENSMUST00000037478	protein_coding	principal1	8	-1	69089222	3115
ENSMUSG00000084789	lincRNA	Gm12974	ENSMUST00000129875	lincRNA		4	1	133816420	333
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000110352	protein_coding	principal3	12	1	80945532	1491
ENSMUSG00000094821	protein_coding	Gm21518	ENSMUST00000178115	protein_coding	alternative2	Y	1	62192289	567
ENSMUSG00000103491	TEC	Gm10730	ENSMUST00000194097	TEC		3	-1	47265800	2723
ENSMUSG00000097814	antisense	Panct2	ENSMUST00000188631	antisense		1	1	96871126	625
ENSMUSG00000007457	protein_coding	2310003L06Rik	ENSMUST00000007601	protein_coding	principal1	5	1	87969459	1603
ENSMUSG00000109123	lincRNA	Gm39059	ENSMUST00000209160	lincRNA		7	-1	100543180	424
ENSMUSG00000078134	processed_pseudogene	Srsf3-ps	ENSMUST00000104933	processed_pseudogene		11	-1	98625661	1311
ENSMUSG00000097814	antisense	Panct2	ENSMUST00000181489	antisense		1	1	96872221	3849
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000110351	protein_coding	alternative2	12	1	80945532	1498
ENSMUSG00000107476	transcribed_unitary_pseudogene	Zfp862-ps	ENSMUST00000203848	processed_transcript		6	1	48504337	1776
ENSMUSG00000038822	protein_coding	Hace1	ENSMUST00000037044	protein_coding	principal1	10	1	45577829	3785
ENSMUSG00000097814	antisense	Panct2	ENSMUST00000202118	antisense		1	1	96872233	410
ENSMUSG00000101891	lincRNA	Gm29132	ENSMUST00000191588	lincRNA		Y	-1	59774001	622
ENSMUSG00000101891	lincRNA	Gm29132	ENSMUST00000186791	lincRNA		Y	-1	59774001	437
ENSMUSG00000105888	lincRNA	BC037156	ENSMUST00000196993	lincRNA		5	1	87908779	430
ENSMUSG00000074443	protein_coding	Defa22	ENSMUST00000098897	protein_coding	principal1	8	1	21162277	419
ENSMUSG00000026480	protein_coding	Ncf2	ENSMUST00000186568	protein_coding	principal1	1	1	152800194	3550
ENSMUSG00000038822	protein_coding	Hace1	ENSMUST00000131568	protein_coding		10	1	45578141	385
ENSMUSG00000036330	protein_coding	Slc18a1	ENSMUST00000142548	retained_intron		8	-1	69077228	1221
ENSMUSG00000109487	protein_coding	Olfr1298	ENSMUST00000208284	protein_coding	principal1	2	-1	111649201	1563
ENSMUSG00000036330	protein_coding	Slc18a1	ENSMUST00000147674	retained_intron		8	-1	69075508	2697
ENSMUSG00000073856	protein_coding	Iqck	ENSMUST00000098087	protein_coding	alternative2	7	1	118855775	1503
ENSMUSG00000107476	transcribed_unitary_pseudogene	Zfp862-ps	ENSMUST00000203457	transcribed_unitary_pseudogene		6	1	48504374	3551
ENSMUSG00000110799	lincRNA	4930543K20Rik	ENSMUST00000217044	lincRNA		10	-1	37263748	355
ENSMUSG00000109487	protein_coding	Olfr1298	ENSMUST00000119566	protein_coding	principal1	2	-1	111645995	939
ENSMUSG00000038822	protein_coding	Hace1	ENSMUST00000136905	processed_transcript		10	1	45578280	464
ENSMUSG00000036330	protein_coding	Slc18a1	ENSMUST00000148856	protein_coding		8	-1	69089235	613
ENSMUSG00000026480	protein_coding	Ncf2	ENSMUST00000190323	protein_coding		1	1	152807837	584
ENSMUSG00000036330	protein_coding	Slc18a1	ENSMUST00000142710	processed_transcript		8	-1	69089209	366
ENSMUSG00000107476	transcribed_unitary_pseudogene	Zfp862-ps	ENSMUST00000204484	processed_transcript		6	1	48504388	6065
ENSMUSG00000038822	protein_coding	Hace1	ENSMUST00000142956	processed_transcript		10	1	45588384	620
ENSMUSG00000026480	protein_coding	Ncf2	ENSMUST00000187641	retained_intron		1	1	152807978	4661
ENSMUSG00000107476	transcribed_unitary_pseudogene	Zfp862-ps	ENSMUST00000203789	processed_transcript		6	1	48512381	806
ENSMUSG00000038822	protein_coding	Hace1	ENSMUST00000150511	protein_coding		10	1	45671514	1611
ENSMUSG00000107476	transcribed_unitary_pseudogene	Zfp862-ps	ENSMUST00000205224	processed_transcript		6	1	48512438	738
ENSMUSG00000074442	protein_coding	Defa31	ENSMUST00000098896	protein_coding	principal1	8	1	21191614	377
ENSMUSG00000026480	protein_coding	Ncf2	ENSMUST00000189135	retained_intron		1	1	152810890	430
ENSMUSG00000038822	protein_coding	Hace1	ENSMUST00000131406	protein_coding		10	1	45672558	1524
ENSMUSG00000044211	processed_pseudogene	Gm7887	ENSMUST00000056948	processed_pseudogene		6	-1	48525090	537
ENSMUSG00000081428	processed_pseudogene	Tpt1-ps2	ENSMUST00000120548	processed_pseudogene		4	1	54564623	521
ENSMUSG00000073856	protein_coding	Iqck	ENSMUST00000152136	nonsense_mediated_decay		7	1	118855775	1597
ENSMUSG00000039691	protein_coding	Tspan10	ENSMUST00000044105	protein_coding	principal1	11	1	120442644	1680
ENSMUSG00000026480	protein_coding	Ncf2	ENSMUST00000187235	retained_intron		1	1	152823569	686
ENSMUSG00000099421	lincRNA	Gm29067	ENSMUST00000190821	lincRNA		4	-1	54646280	470
ENSMUSG00000025193	protein_coding	Cutc	ENSMUST00000026199	protein_coding		19	1	43752996	1298
ENSMUSG00000109389	polymorphic_pseudogene	Olfr1300-ps1	ENSMUST00000208175	polymorphic_pseudogene	principal1	2	1	111667437	2235
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000153056	retained_intron		12	1	80945532	2720
ENSMUSG00000059014	unprocessed_pseudogene	Gm5409	ENSMUST00000160346	unprocessed_pseudogene		6	1	41416912	698
ENSMUSG00000038822	protein_coding	Hace1	ENSMUST00000155368	retained_intron		10	1	45677117	10257
ENSMUSG00000082091	processed_pseudogene	Gm13922	ENSMUST00000119505	processed_pseudogene		2	-1	111698878	156
ENSMUSG00000026480	protein_coding	Ncf2	ENSMUST00000027754	protein_coding	principal1	1	1	152807890	2596
ENSMUSG00000039691	protein_coding	Tspan10	ENSMUST00000143192	processed_transcript		11	1	120442671	470
ENSMUSG00000111036	transcribed_processed_pseudogene	Gm47502	ENSMUST00000213585	transcribed_processed_pseudogene		10	1	45680957	412
ENSMUSG00000087077	lincRNA	Gm12480	ENSMUST00000129576	lincRNA		4	1	54651903	774
ENSMUSG00000046733	protein_coding	Gprc5a	ENSMUST00000050104	protein_coding	principal1	6	1	135065651	2083
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000152662	processed_transcript		12	1	80945534	538
ENSMUSG00000111036	transcribed_processed_pseudogene	Gm47502	ENSMUST00000216742	processed_transcript		10	1	45680986	540
ENSMUSG00000073856	protein_coding	Iqck	ENSMUST00000132148	processed_transcript		7	1	118937123	730
ENSMUSG00000086371	lincRNA	Gm12478	ENSMUST00000127709	lincRNA		4	1	54646542	353
ENSMUSG00000111491	TEC	Gm47503	ENSMUST00000215636	TEC		10	1	45656955	4958
ENSMUSG00000021322	protein_coding	Aoah	ENSMUST00000021757	protein_coding	principal1	13	1	20794113	2921
ENSMUSG00000092521	unprocessed_pseudogene	Gm4271	ENSMUST00000174444	unprocessed_pseudogene		17	1	36732642	973
ENSMUSG00000111466	processed_pseudogene	Gm47504	ENSMUST00000214524	processed_pseudogene		10	1	45581219	353
ENSMUSG00000083868	processed_pseudogene	Gm12477	ENSMUST00000121221	processed_pseudogene		4	-1	54670192	571
ENSMUSG00000073856	protein_coding	Iqck	ENSMUST00000106547	protein_coding	principal2	7	1	118855775	2026
ENSMUSG00000079116	protein_coding	Defa41	ENSMUST00000110754	protein_coding	principal1	8	1	21201561	418
ENSMUSG00000082111	processed_pseudogene	Gm12479	ENSMUST00000120731	processed_pseudogene		4	1	54853128	1585
ENSMUSG00000074804	processed_pseudogene	AU015228	ENSMUST00000121103	processed_pseudogene		2	1	130100524	1320
ENSMUSG00000109071	processed_transcript	Gm44840	ENSMUST00000208983	processed_transcript		2	1	111661456	1168
ENSMUSG00000094321	unprocessed_pseudogene	Defa-ps5	ENSMUST00000121541	unprocessed_pseudogene		8	1	21218984	279
ENSMUSG00000114507	processed_pseudogene	Gm30747	ENSMUST00000225536	processed_pseudogene		13	-1	108233555	467
ENSMUSG00000028261	protein_coding	Ndufaf4	ENSMUST00000029925	protein_coding	principal1	4	1	24898083	3632
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000125814	processed_transcript		12	1	80945548	886
ENSMUSG00000021322	protein_coding	Aoah	ENSMUST00000223364	processed_transcript		13	1	20794134	1566
ENSMUSG00000097742	lincRNA	Gm26535	ENSMUST00000181602	lincRNA		10	1	37337486	2600
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000138434	nonsense_mediated_decay		12	1	80945570	547
ENSMUSG00000021322	protein_coding	Aoah	ENSMUST00000221982	protein_coding		13	1	20794135	919
ENSMUSG00000109219	protein_coding	Olfr1299	ENSMUST00000213511	protein_coding	principal1	2	1	111661419	1783
ENSMUSG00000025193	protein_coding	Cutc	ENSMUST00000112047	protein_coding	principal1	19	1	43753098	1233
ENSMUSG00000026179	protein_coding	Pnkd	ENSMUST00000113805	protein_coding		1	1	74284930	740
ENSMUSG00000111549	processed_pseudogene	Gm48172	ENSMUST00000215235	processed_pseudogene		10	-1	37452680	229
ENSMUSG00000054325	protein_coding	Lce3a	ENSMUST00000067318	protein_coding	principal1	3	-1	92926230	549
ENSMUSG00000109219	protein_coding	Olfr1299	ENSMUST00000207228	protein_coding	principal1	2	1	111661419	1678
ENSMUSG00000074754	protein_coding	Smim26	ENSMUST00000136628	protein_coding	principal1	2	1	144594054	471
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000151968	processed_transcript		12	1	80945579	489
ENSMUSG00000034159	protein_coding	Mab21l4	ENSMUST00000043718	protein_coding	principal1	1	-1	93160948	2299
ENSMUSG00000111488	lincRNA	Gm31378	ENSMUST00000213538	lincRNA		10	-1	38122061	267
ENSMUSG00000086935	antisense	Gm15956	ENSMUST00000153352	antisense		18	1	12193768	502
ENSMUSG00000021322	protein_coding	Aoah	ENSMUST00000222135	processed_transcript		13	1	21010633	1626
ENSMUSG00000028261	protein_coding	Ndufaf4	ENSMUST00000146721	processed_transcript		4	1	24898131	2358
ENSMUSG00000092385	unprocessed_pseudogene	Gm20401	ENSMUST00000173717	unprocessed_pseudogene		17	-1	36753979	212
ENSMUSG00000025193	protein_coding	Cutc	ENSMUST00000153295	protein_coding		19	1	43753137	788
ENSMUSG00000085470	lincRNA	1700012C14Rik	ENSMUST00000143687	lincRNA		6	1	30460128	425
ENSMUSG00000038429	protein_coding	Usp5	ENSMUST00000047510	protein_coding	principal3	6	-1	124829484	3213
ENSMUSG00000082839	processed_pseudogene	Gm14588	ENSMUST00000119895	processed_pseudogene		X	-1	43473954	172
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000110356	protein_coding	principal3	12	1	80945585	1568
ENSMUSG00000025193	protein_coding	Cutc	ENSMUST00000123564	retained_intron		19	1	43764873	685
ENSMUSG00000034159	protein_coding	Mab21l4	ENSMUST00000143419	protein_coding	principal1	1	-1	93160870	2074
ENSMUSG00000028261	protein_coding	Ndufaf4	ENSMUST00000151249	protein_coding		4	1	24898176	673
ENSMUSG00000092460	processed_pseudogene	Gm8878	ENSMUST00000173552	processed_pseudogene		17	-1	36762423	1725
ENSMUSG00000085470	lincRNA	1700012C14Rik	ENSMUST00000132023	lincRNA		6	1	30460985	498
ENSMUSG00000099626	unprocessed_pseudogene	Gm28185	ENSMUST00000186815	unprocessed_pseudogene		Y	-1	62278944	694
ENSMUSG00000102108	unprocessed_pseudogene	Gm29037	ENSMUST00000189092	unprocessed_pseudogene		Y	-1	62315532	313
ENSMUSG00000030851	protein_coding	Ldhc	ENSMUST00000014545	protein_coding	principal1	7	1	46861203	1370
ENSMUSG00000038429	protein_coding	Usp5	ENSMUST00000122110	protein_coding	alternative1	6	-1	124829435	3076
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000151036	retained_intron		12	1	80946376	3482
ENSMUSG00000112002	processed_pseudogene	Gm9585	ENSMUST00000219681	processed_pseudogene		10	-1	118233531	1404
ENSMUSG00000030851	protein_coding	Ldhc	ENSMUST00000211784	protein_coding		7	1	46861286	829
ENSMUSG00000112216	protein_coding	Gm32717	ENSMUST00000219147	protein_coding	principal1	10	-1	118240780	2409
ENSMUSG00000030851	protein_coding	Ldhc	ENSMUST00000210585	protein_coding		7	1	46861286	1071
ENSMUSG00000103102	TEC	Gm37049	ENSMUST00000194356	TEC		1	1	163108993	1983
ENSMUSG00000042031	protein_coding	Lce3b	ENSMUST00000046234	protein_coding	principal1	3	1	92932979	562
ENSMUSG00000083598	processed_pseudogene	Gm14579	ENSMUST00000117068	processed_pseudogene		X	-1	43590025	283
ENSMUSG00000030851	protein_coding	Ldhc	ENSMUST00000148565	protein_coding		7	1	46861322	767
ENSMUSG00000046056	protein_coding	Sbsn	ENSMUST00000182229	protein_coding	alternative2	7	1	30751471	732
ENSMUSG00000038429	protein_coding	Usp5	ENSMUST00000131805	retained_intron		6	-1	124818637	1112
ENSMUSG00000021134	protein_coding	Srsf5	ENSMUST00000094693	protein_coding	principal3	12	1	80945504	1527
ENSMUSG00000093950	protein_coding	Gm20823	ENSMUST00000179949	protein_coding	principal1	Y	-1	62464845	1231
ENSMUSG00000030851	protein_coding	Ldhc	ENSMUST00000126004	protein_coding		7	1	46861407	872
ENSMUSG00000104364	processed_pseudogene	Gm38078	ENSMUST00000192771	processed_pseudogene		3	1	92937681	392
ENSMUSG00000038429	protein_coding	Usp5	ENSMUST00000154189	retained_intron		6	-1	124817893	453
ENSMUSG00000078320	protein_coding	Tex13c1	ENSMUST00000105113	protein_coding	principal1	X	1	43591160	2074
ENSMUSG00000038429	protein_coding	Usp5	ENSMUST00000129159	retained_intron		6	-1	124823469	394
ENSMUSG00000038637	protein_coding	Lrrc56	ENSMUST00000084446	protein_coding	alternative2	7	1	141194157	2390
ENSMUSG00000038429	protein_coding	Usp5	ENSMUST00000142058	protein_coding		6	-1	124829408	924
ENSMUSG00000101323	unprocessed_pseudogene	Gm21877	ENSMUST00000185640	unprocessed_pseudogene		Y	-1	62537931	694
ENSMUSG00000038429	protein_coding	Usp5	ENSMUST00000141042	retained_intron		6	-1	124823623	464
ENSMUSG00000038429	protein_coding	Usp5	ENSMUST00000146098	retained_intron		6	-1	124824200	774
ENSMUSG00000001622	protein_coding	Csn3	ENSMUST00000001667	protein_coding	principal1	5	1	87925579	991
ENSMUSG00000046056	protein_coding	Sbsn	ENSMUST00000080518	protein_coding	principal3	7	1	30751533	2221
ENSMUSG00000038429	protein_coding	Usp5	ENSMUST00000153306	protein_coding		6	-1	124828895	825
ENSMUSG00000021696	protein_coding	Elovl7	ENSMUST00000022207	protein_coding	principal1	13	1	108214404	4013
ENSMUSG00000001622	protein_coding	Csn3	ENSMUST00000113267	protein_coding	principal1	5	1	87925607	1258
ENSMUSG00000025386	protein_coding	Pde6g	ENSMUST00000141795	processed_transcript		11	-1	120453434	731
ENSMUSG00000071517	protein_coding	Gm10334	ENSMUST00000095999	protein_coding	principal1	6	-1	41446145	876
ENSMUSG00000046056	protein_coding	Sbsn	ENSMUST00000182227	protein_coding	alternative2	7	1	30751555	432
ENSMUSG00000046056	protein_coding	Sbsn	ENSMUST00000182721	protein_coding	alternative2	7	1	30751562	677
ENSMUSG00000090352	unprocessed_pseudogene	Gm3972	ENSMUST00000173960	unprocessed_pseudogene		7	-1	9501500	2861
ENSMUSG00000090659	protein_coding	Zfp493	ENSMUST00000220570	protein_coding		13	1	67779693	376
ENSMUSG00000001622	protein_coding	Csn3	ENSMUST00000144929	retained_intron		5	1	87925612	1750
ENSMUSG00000095328	unprocessed_pseudogene	Defa-ps6	ENSMUST00000122172	unprocessed_pseudogene		8	1	21225406	282
ENSMUSG00000046056	protein_coding	Sbsn	ENSMUST00000182577	retained_intron		7	1	30752628	2460
ENSMUSG00000030814	protein_coding	Bcl7c	ENSMUST00000106282	nonsense_mediated_decay		7	-1	127708785	6235
ENSMUSG00000025386	protein_coding	Pde6g	ENSMUST00000155421	processed_transcript		11	-1	120453452	2250
ENSMUSG00000113965	TEC	A730091E23Rik	ENSMUST00000221700	TEC		13	1	32338819	3825
ENSMUSG00000021696	protein_coding	Elovl7	ENSMUST00000225550	nonsense_mediated_decay		13	1	108214410	2351
ENSMUSG00000020706	protein_coding	Ftsj3	ENSMUST00000021048	protein_coding	principal1	11	-1	106256079	3144
ENSMUSG00000098146	antisense	Gm26935	ENSMUST00000182686	antisense		7	1	30737653	519
ENSMUSG00000114519	processed_pseudogene	Gm32376	ENSMUST00000224978	processed_pseudogene		13	-1	108220841	374
ENSMUSG00000001622	protein_coding	Csn3	ENSMUST00000140690	retained_intron		5	1	87925627	1099
ENSMUSG00000052353	protein_coding	Cemip	ENSMUST00000064174	protein_coding	principal1	7	-1	84086502	7111
ENSMUSG00000020706	protein_coding	Ftsj3	ENSMUST00000126938	retained_intron		11	-1	106250698	574
ENSMUSG00000111234	lincRNA	4930591E09Rik	ENSMUST00000215643	lincRNA		10	1	38175780	480
ENSMUSG00000090659	protein_coding	Zfp493	ENSMUST00000164936	protein_coding	principal1	13	1	67779705	3258
ENSMUSG00000026260	protein_coding	Ndufa10	ENSMUST00000027478	protein_coding	principal1	1	-1	92473860	2020
ENSMUSG00000020706	protein_coding	Ftsj3	ENSMUST00000154635	retained_intron		11	-1	106252554	590
ENSMUSG00000104459	TEC	Gm37824	ENSMUST00000193430	TEC		2	1	13004365	3236
ENSMUSG00000001622	protein_coding	Csn3	ENSMUST00000113271	protein_coding	principal1	5	1	87925635	1596
ENSMUSG00000020706	protein_coding	Ftsj3	ENSMUST00000127803	retained_intron		11	-1	106253995	543
ENSMUSG00000026558	protein_coding	Uck2	ENSMUST00000053686	protein_coding	principal1	1	-1	167285320	4731
ENSMUSG00000038637	protein_coding	Lrrc56	ENSMUST00000070458	protein_coding	principal3	7	1	141194176	2502
ENSMUSG00000102900	TEC	Gm37811	ENSMUST00000192416	TEC		2	1	13009886	2601
ENSMUSG00000052353	protein_coding	Cemip	ENSMUST00000145171	retained_intron		7	-1	83944340	1771
ENSMUSG00000080722	unprocessed_pseudogene	Defa-ps7	ENSMUST00000117139	unprocessed_pseudogene		8	-1	21232233	168
ENSMUSG00000111048	processed_pseudogene	Gm48173	ENSMUST00000213786	processed_pseudogene		10	-1	38216872	294
ENSMUSG00000086992	antisense	Gm15941	ENSMUST00000140044	antisense		15	-1	37432664	1825
ENSMUSG00000090659	protein_coding	Zfp493	ENSMUST00000223540	processed_transcript		13	1	67779716	461
ENSMUSG00000090659	protein_coding	Zfp493	ENSMUST00000181319	protein_coding		13	1	67779754	730
ENSMUSG00000082957	processed_pseudogene	Gm15303	ENSMUST00000118676	processed_pseudogene		8	1	21236674	2624
ENSMUSG00000001622	protein_coding	Csn3	ENSMUST00000148793	retained_intron		5	1	87927811	706
ENSMUSG00000086992	antisense	Gm15941	ENSMUST00000123777	antisense		15	-1	37428869	674
ENSMUSG00000109224	processed_transcript	Tmem147os	ENSMUST00000182488	processed_transcript		7	1	30734739	456
ENSMUSG00000026558	protein_coding	Uck2	ENSMUST00000192702	nonsense_mediated_decay		1	-1	167284884	1194
ENSMUSG00000111208	lincRNA	Gm48197	ENSMUST00000213800	lincRNA		10	-1	38313846	711
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000193734	protein_coding	principal1	3	1	22076652	8237
ENSMUSG00000038637	protein_coding	Lrrc56	ENSMUST00000144199	retained_intron		7	1	141194179	4340
ENSMUSG00000026558	protein_coding	Uck2	ENSMUST00000195443	protein_coding		1	-1	167236835	738
ENSMUSG00000100704	protein_coding	Gm28434	ENSMUST00000187738	protein_coding	principal1	5	1	87969517	500
ENSMUSG00000090659	protein_coding	Zfp493	ENSMUST00000180507	retained_intron		13	1	67785957	3963
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000113476	protein_coding	principal1	19	1	6399340	2296
ENSMUSG00000020706	protein_coding	Ftsj3	ENSMUST00000143729	retained_intron		11	-1	106255796	677
ENSMUSG00000086992	antisense	Gm15941	ENSMUST00000151356	antisense		15	-1	37432148	682
ENSMUSG00000026558	protein_coding	Uck2	ENSMUST00000027839	protein_coding		1	-1	167243158	803
ENSMUSG00000020706	protein_coding	Ftsj3	ENSMUST00000143884	retained_intron		11	-1	106255804	700
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000113475	protein_coding		19	1	6399456	573
ENSMUSG00000085770	lincRNA	Gm11381	ENSMUST00000138574	lincRNA		13	-1	32383688	420
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000113468	protein_coding		19	1	6399746	429
ENSMUSG00000086992	antisense	Gm15941	ENSMUST00000127335	antisense		15	-1	37432662	639
ENSMUSG00000026558	protein_coding	Uck2	ENSMUST00000192269	protein_coding		1	-1	167284601	560
ENSMUSG00000025386	protein_coding	Pde6g	ENSMUST00000026452	protein_coding	principal1	11	-1	120453500	900
ENSMUSG00000086992	antisense	Gm15941	ENSMUST00000135401	antisense		15	-1	37432653	726
ENSMUSG00000038637	protein_coding	Lrrc56	ENSMUST00000047093	protein_coding	principal3	7	1	141195078	2197
ENSMUSG00000026260	protein_coding	Ndufa10	ENSMUST00000189503	nonsense_mediated_decay		1	-1	92473757	1514
ENSMUSG00000086992	antisense	Gm15941	ENSMUST00000128804	antisense		15	-1	37433414	558
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000202747	protein_coding	principal1	3	1	22076727	4209
ENSMUSG00000030814	protein_coding	Bcl7c	ENSMUST00000205977	protein_coding	alternative1	7	-1	127708639	891
ENSMUSG00000097320	antisense	Tmem147os	ENSMUST00000180820	antisense		7	1	30729579	1276
ENSMUSG00000026558	protein_coding	Uck2	ENSMUST00000191745	nonsense_mediated_decay		1	-1	167284878	732
ENSMUSG00000026260	protein_coding	Ndufa10	ENSMUST00000153897	retained_intron		1	-1	92460717	513
ENSMUSG00000006273	protein_coding	Atp6v1b2	ENSMUST00000006435	protein_coding	principal1	8	1	69088646	2825
ENSMUSG00000097320	antisense	Tmem147os	ENSMUST00000183194	antisense		7	1	30732706	467
ENSMUSG00000086125	antisense	Gm15942	ENSMUST00000136305	antisense		15	1	37700704	810
ENSMUSG00000040018	protein_coding	Cox15	ENSMUST00000045562	protein_coding	principal1	19	-1	43753000	4798
ENSMUSG00000026558	protein_coding	Uck2	ENSMUST00000193579	processed_transcript		1	-1	167284707	480
ENSMUSG00000026260	protein_coding	Ndufa10	ENSMUST00000187098	processed_transcript		1	-1	92462989	248
ENSMUSG00000084382	processed_pseudogene	Gm3267	ENSMUST00000118671	processed_pseudogene		15	1	37492756	473
ENSMUSG00000030814	protein_coding	Bcl7c	ENSMUST00000206200	nonsense_mediated_decay		7	-1	127708462	479
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000202647	processed_transcript		3	1	22076756	404
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000200793	protein_coding		3	1	22076832	602
ENSMUSG00000038637	protein_coding	Lrrc56	ENSMUST00000150141	processed_transcript		7	1	141195143	399
ENSMUSG00000029280	protein_coding	Smr3a	ENSMUST00000189633	protein_coding	alternative2	5	1	88002549	467
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000202149	processed_transcript		3	1	22076881	270
ENSMUSG00000026260	protein_coding	Ndufa10	ENSMUST00000187141	retained_intron		1	-1	92470862	675
ENSMUSG00000106121	sense_intronic	Gm42679	ENSMUST00000197086	sense_intronic		3	1	102491342	2906
ENSMUSG00000038637	protein_coding	Lrrc56	ENSMUST00000209220	nonsense_mediated_decay		7	1	141195158	654
ENSMUSG00000040018	protein_coding	Cox15	ENSMUST00000129242	retained_intron		19	-1	43740102	380
ENSMUSG00000026260	protein_coding	Ndufa10	ENSMUST00000185466	retained_intron		1	-1	92471051	715
ENSMUSG00000000889	protein_coding	Dbh	ENSMUST00000000910	protein_coding	principal1	2	1	27165233	2552
ENSMUSG00000011884	protein_coding	Gltp	ENSMUST00000012028	protein_coding	principal1	5	-1	114690984	1762
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000200943	protein_coding		3	1	22076936	376
ENSMUSG00000038637	protein_coding	Lrrc56	ENSMUST00000144008	protein_coding		7	1	141196934	381
ENSMUSG00000042229	protein_coding	Rabif	ENSMUST00000047978	protein_coding	principal1	1	1	134494648	2861
ENSMUSG00000026260	protein_coding	Ndufa10	ENSMUST00000185251	protein_coding		1	-1	92473747	354
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000146601	protein_coding		19	1	6399864	352
ENSMUSG00000061099	protein_coding	Gapdhs	ENSMUST00000182067	nonsense_mediated_decay		7	-1	30733068	675
ENSMUSG00000030814	protein_coding	Bcl7c	ENSMUST00000207019	protein_coding		7	-1	127708726	654
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000150713	protein_coding		19	1	6399868	453
ENSMUSG00000026260	protein_coding	Ndufa10	ENSMUST00000189582	retained_intron		1	-1	92473767	989
ENSMUSG00000000889	protein_coding	Dbh	ENSMUST00000155290	processed_transcript		2	1	27177093	205
ENSMUSG00000025922	processed_pseudogene	Rpl7-ps8	ENSMUST00000027054	processed_pseudogene		15	1	59210908	810
ENSMUSG00000011884	protein_coding	Gltp	ENSMUST00000112214	protein_coding		5	-1	114690941	944
ENSMUSG00000085224	antisense	Gm13425	ENSMUST00000145389	antisense		2	-1	31640589	5391
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000063988	protein_coding	principal1	3	1	22077284	6667
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000139522	nonsense_mediated_decay		19	1	6399874	648
ENSMUSG00000029280	protein_coding	Smr3a	ENSMUST00000031211	protein_coding	principal2	5	1	88002553	635
ENSMUSG00000062751	protein_coding	Prss1	ENSMUST00000031910	protein_coding	principal1	6	1	41458932	805
ENSMUSG00000096712	processed_pseudogene	Gm15454	ENSMUST00000179718	processed_pseudogene		1	1	134518081	483
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000192328	protein_coding	principal1	3	1	22114489	3323
ENSMUSG00000011884	protein_coding	Gltp	ENSMUST00000112212	protein_coding		5	-1	114690908	799
ENSMUSG00000101955	unprocessed_pseudogene	Gm29376	ENSMUST00000189357	unprocessed_pseudogene		1	1	134519978	835
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000123661	processed_transcript		19	1	6399917	430
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000126523	protein_coding		18	1	12168717	1282
ENSMUSG00000030980	protein_coding	Knop1	ENSMUST00000106550	protein_coding	principal3	7	-1	118856254	5524
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000202356	protein_coding		3	1	22139274	651
ENSMUSG00000030814	protein_coding	Bcl7c	ENSMUST00000061468	protein_coding	principal3	7	-1	127708933	1132
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000113472	protein_coding		19	1	6400113	2124
ENSMUSG00000027859	protein_coding	Ngf	ENSMUST00000035952	protein_coding	principal1	3	1	102469919	904
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000201509	nonsense_mediated_decay		3	1	22148942	4301
ENSMUSG00000074441	protein_coding	Defa40	ENSMUST00000098895	protein_coding	principal1	8	1	21249754	385
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000145611	processed_transcript		19	1	6400527	459
ENSMUSG00000099605	antisense	1700066N21Rik	ENSMUST00000190123	antisense		5	-1	87979351	783
ENSMUSG00000027630	protein_coding	Tbl1xr1	ENSMUST00000201467	protein_coding		3	1	22203192	354
ENSMUSG00000046591	protein_coding	Ticrr	ENSMUST00000035977	protein_coding	principal1	7	1	79660196	7199
ENSMUSG00000103293	processed_pseudogene	Gm5842	ENSMUST00000195073	processed_pseudogene		3	-1	22081115	622
ENSMUSG00000110782	processed_pseudogene	Gm48198	ENSMUST00000214608	processed_pseudogene		10	-1	38434135	157
ENSMUSG00000030814	protein_coding	Bcl7c	ENSMUST00000153277	nonsense_mediated_decay		7	-1	127707304	785
ENSMUSG00000032023	protein_coding	Jhy	ENSMUST00000034521	protein_coding	principal1	9	-1	40964118	3074
ENSMUSG00000079466	protein_coding	Prdm12	ENSMUST00000113470	protein_coding	principal1	2	1	31640037	2471
ENSMUSG00000113449	lincRNA	Gm48073	ENSMUST00000221163	lincRNA		13	-1	32536415	2763
ENSMUSG00000031835	protein_coding	Mbtps1	ENSMUST00000098362	protein_coding	principal1	8	-1	119558727	4336
ENSMUSG00000046591	protein_coding	Ticrr	ENSMUST00000205750	retained_intron		7	1	79660222	1452
ENSMUSG00000030814	protein_coding	Bcl7c	ENSMUST00000144103	processed_transcript		7	-1	127708075	486
ENSMUSG00000045532	protein_coding	C1ql1	ENSMUST00000057849	protein_coding	principal1	11	-1	102946688	1473
ENSMUSG00000102221	unprocessed_pseudogene	Gm37301	ENSMUST00000195412	unprocessed_pseudogene		6	1	41480508	568
ENSMUSG00000007907	protein_coding	Cabs1	ENSMUST00000008051	protein_coding	principal1	5	1	87979439	1505
ENSMUSG00000052353	protein_coding	Cemip	ENSMUST00000150495	retained_intron		7	-1	84086502	4287
ENSMUSG00000108801	lincRNA	Gm39090	ENSMUST00000205992	lincRNA		7	1	127691935	508
ENSMUSG00000027859	protein_coding	Ngf	ENSMUST00000198168	protein_coding		3	1	102469928	322
ENSMUSG00000032023	protein_coding	Jhy	ENSMUST00000162122	retained_intron		9	-1	40897618	1156
ENSMUSG00000108801	lincRNA	Gm39090	ENSMUST00000205284	lincRNA		7	1	127697031	972
ENSMUSG00000094180	unprocessed_pseudogene	Defa-ps8	ENSMUST00000120972	unprocessed_pseudogene		8	1	21270693	279
ENSMUSG00000115604	processed_pseudogene	Gm7691	ENSMUST00000226413	processed_pseudogene		15	1	59238489	514
ENSMUSG00000015341	protein_coding	Golga7	ENSMUST00000051094	protein_coding	principal1	8	-1	23257074	1792
ENSMUSG00000084134	processed_pseudogene	Gm13930	ENSMUST00000118569	processed_pseudogene		2	1	111740105	368
ENSMUSG00000052353	protein_coding	Cemip	ENSMUST00000142518	retained_intron		7	-1	83976075	3729
ENSMUSG00000055961	antisense	BC051076	ENSMUST00000199477	antisense		5	1	87963485	2868
ENSMUSG00000032023	protein_coding	Jhy	ENSMUST00000160120	protein_coding		9	-1	40962333	455
ENSMUSG00000052353	protein_coding	Cemip	ENSMUST00000147578	retained_intron		7	-1	84086502	4580
ENSMUSG00000055961	antisense	BC051076	ENSMUST00000069773	antisense		5	1	87963485	2865
ENSMUSG00000006273	protein_coding	Atp6v1b2	ENSMUST00000153079	retained_intron		8	1	69088768	2507
ENSMUSG00000111346	processed_pseudogene	Gm18586	ENSMUST00000217265	processed_pseudogene		9	-1	40930426	518
ENSMUSG00000107384	antisense	Gm42557	ENSMUST00000202037	antisense		5	-1	150082795	582
ENSMUSG00000031835	protein_coding	Mbtps1	ENSMUST00000212685	retained_intron		8	-1	119558735	6624
ENSMUSG00000006273	protein_coding	Atp6v1b2	ENSMUST00000153680	retained_intron		8	1	69088787	611
ENSMUSG00000031835	protein_coding	Mbtps1	ENSMUST00000081381	protein_coding	principal1	8	-1	119558735	4195
ENSMUSG00000114187	processed_pseudogene	Gm18626	ENSMUST00000221512	processed_pseudogene		12	1	87518272	1409
ENSMUSG00000081937	unprocessed_pseudogene	Gm14599	ENSMUST00000120469	unprocessed_pseudogene		X	-1	53820026	474
ENSMUSG00000107360	sense_intronic	Gm42558	ENSMUST00000200982	sense_intronic		5	1	150022479	265
ENSMUSG00000006273	protein_coding	Atp6v1b2	ENSMUST00000125211	retained_intron		8	1	69088789	507
ENSMUSG00000031835	protein_coding	Mbtps1	ENSMUST00000212736	processed_transcript		8	-1	119515843	415
ENSMUSG00000006273	protein_coding	Atp6v1b2	ENSMUST00000123290	retained_intron		8	1	69102213	642
ENSMUSG00000087033	lincRNA	Gm14155	ENSMUST00000127230	lincRNA		2	1	151829067	587
ENSMUSG00000031835	protein_coding	Mbtps1	ENSMUST00000212082	retained_intron		8	-1	119515655	429
ENSMUSG00000061099	protein_coding	Gapdhs	ENSMUST00000182634	protein_coding	alternative2	7	-1	30743681	1457
ENSMUSG00000087176	processed_transcript	D230022J07Rik	ENSMUST00000144735	processed_transcript		2	1	73386970	1062
ENSMUSG00000006273	protein_coding	Atp6v1b2	ENSMUST00000129797	retained_intron		8	1	69103128	766
ENSMUSG00000089995	antisense	Gm15716	ENSMUST00000162457	antisense		8	1	69044754	404
ENSMUSG00000031835	protein_coding	Mbtps1	ENSMUST00000212290	retained_intron		8	-1	119525397	815
ENSMUSG00000083278	processed_pseudogene	Gm14589	ENSMUST00000121640	processed_pseudogene		X	1	53844121	727
ENSMUSG00000031835	protein_coding	Mbtps1	ENSMUST00000212244	retained_intron		8	-1	119538966	407
ENSMUSG00000030980	protein_coding	Knop1	ENSMUST00000063607	protein_coding	alternative2	7	-1	118856001	4884
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000021572	protein_coding	principal1	13	-1	8871044	4526
ENSMUSG00000031835	protein_coding	Mbtps1	ENSMUST00000212813	retained_intron		8	-1	119558441	849
ENSMUSG00000080968	processed_pseudogene	Atf1-ps	ENSMUST00000120608	processed_pseudogene		X	-1	53884420	810
ENSMUSG00000015341	protein_coding	Golga7	ENSMUST00000121783	protein_coding	principal1	8	-1	23257021	1945
ENSMUSG00000083428	processed_pseudogene	Gm14591	ENSMUST00000120407	processed_pseudogene		X	-1	53966674	518
ENSMUSG00000061099	protein_coding	Gapdhs	ENSMUST00000074758	protein_coding	principal3	7	-1	30739407	1368
ENSMUSG00000046591	protein_coding	Ticrr	ENSMUST00000206622	nonsense_mediated_decay		7	1	79660231	5067
ENSMUSG00000094057	IG_D_gene	Ighd2-7	ENSMUST00000177965	IG_D_gene	principal1	12	-1	113456736	17
ENSMUSG00000053368	protein_coding	Rxfp2	ENSMUST00000143989	retained_intron		5	1	150018675	2471
ENSMUSG00000081119	transcribed_processed_pseudogene	Gm14601	ENSMUST00000120892	transcribed_processed_pseudogene		X	-1	53974789	236
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000177537	nonsense_mediated_decay		13	-1	8847637	527
ENSMUSG00000114700	processed_pseudogene	Gm19010	ENSMUST00000225873	processed_pseudogene		13	-1	101557831	601
ENSMUSG00000072952	lincRNA	Gm5878	ENSMUST00000203386	lincRNA		6	-1	85126125	4674
ENSMUSG00000015341	protein_coding	Golga7	ENSMUST00000135646	retained_intron		8	-1	23245178	814
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000127021	nonsense_mediated_decay		19	1	6400533	2157
ENSMUSG00000086711	processed_transcript	Gm15482	ENSMUST00000152691	processed_transcript		X	-1	53975000	4529
ENSMUSG00000071604	protein_coding	Fam189a2	ENSMUST00000096164	protein_coding	principal1	19	-1	24031019	2548
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000176098	nonsense_mediated_decay		13	-1	8849558	611
ENSMUSG00000080321	processed_pseudogene	Gm14644	ENSMUST00000116671	processed_pseudogene		X	1	54094373	647
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000176429	protein_coding		13	-1	8853707	580
ENSMUSG00000027859	protein_coding	Ngf	ENSMUST00000106925	protein_coding		3	1	102469928	1187
ENSMUSG00000026730	protein_coding	Pter	ENSMUST00000154269	protein_coding		2	1	12924041	1232
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000146831	protein_coding		19	1	6400547	641
ENSMUSG00000094268	IG_D_gene	Ighd5-8	ENSMUST00000178909	IG_D_gene	principal1	12	-1	113459892	29
ENSMUSG00000015341	protein_coding	Golga7	ENSMUST00000211602	retained_intron		8	-1	23257066	4771
ENSMUSG00000107769	processed_pseudogene	Gm43959	ENSMUST00000203740	processed_pseudogene		6	1	85111693	577
ENSMUSG00000046591	protein_coding	Ticrr	ENSMUST00000206017	nonsense_mediated_decay		7	1	79660245	4635
ENSMUSG00000026730	protein_coding	Pter	ENSMUST00000150283	processed_transcript		2	1	12924062	374
ENSMUSG00000110256	TEC	Gm45412	ENSMUST00000210217	TEC		8	1	23256635	2275
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000177409	retained_intron		13	-1	8837234	502
ENSMUSG00000099774	lincRNA	Gm29341	ENSMUST00000190179	lincRNA		13	-1	101606233	370
ENSMUSG00000051037	protein_coding	Zfp455	ENSMUST00000120861	protein_coding	principal1	13	1	67194506	2712
ENSMUSG00000030980	protein_coding	Knop1	ENSMUST00000126792	protein_coding	alternative2	7	-1	118855992	3253
ENSMUSG00000018599	protein_coding	Mief2	ENSMUST00000018743	protein_coding	principal1	11	1	60728398	2522
ENSMUSG00000071604	protein_coding	Fam189a2	ENSMUST00000236123	processed_transcript		19	-1	23976435	1051
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000176329	protein_coding		13	-1	8858762	697
ENSMUSG00000026730	protein_coding	Pter	ENSMUST00000114796	protein_coding		2	1	12924069	916
ENSMUSG00000027859	protein_coding	Ngf	ENSMUST00000198644	protein_coding		3	1	102488694	1120
ENSMUSG00000046591	protein_coding	Ticrr	ENSMUST00000206591	nonsense_mediated_decay		7	1	79660247	3655
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000221401	retained_intron		13	-1	8846705	2252
ENSMUSG00000096884	IG_D_gene	Ighd5-4	ENSMUST00000177646	IG_D_gene	principal1	12	-1	113460110	10
ENSMUSG00000117820	processed_pseudogene	Gm50305	ENSMUST00000235965	processed_pseudogene		19	1	24004780	229
ENSMUSG00000097716	lincRNA	1700026J14Rik	ENSMUST00000180937	lincRNA		6	-1	48537474	794
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000035716	protein_coding	principal1	19	1	6400562	2219
ENSMUSG00000051037	protein_coding	Zfp455	ENSMUST00000117110	protein_coding		13	1	67194535	2556
ENSMUSG00000030980	protein_coding	Knop1	ENSMUST00000033277	protein_coding		7	-1	118855684	958
ENSMUSG00000081856	processed_pseudogene	Gm14580	ENSMUST00000119122	processed_pseudogene		X	1	43710391	718
ENSMUSG00000046591	protein_coding	Ticrr	ENSMUST00000206072	processed_transcript		7	1	79669537	617
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000176813	protein_coding		13	-1	8871736	833
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000138555	protein_coding		19	1	6400564	829
ENSMUSG00000046591	protein_coding	Ticrr	ENSMUST00000206677	retained_intron		7	1	79670921	517
ENSMUSG00000026730	protein_coding	Pter	ENSMUST00000134794	protein_coding	principal1	2	1	12924092	3571
ENSMUSG00000096250	IG_D_gene	Ighd2-6	ENSMUST00000178230	IG_D_gene	principal1	12	-1	113461385	17
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000048490	protein_coding		3	1	40949828	2497
ENSMUSG00000018599	protein_coding	Mief2	ENSMUST00000154890	retained_intron		11	1	60728443	716
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000176715	nonsense_mediated_decay		13	-1	8861225	426
ENSMUSG00000048458	protein_coding	Inka2	ENSMUST00000066610	protein_coding	principal3	3	1	105704599	4701
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000113467	protein_coding		19	1	6400623	409
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000122930	processed_transcript		19	1	6401695	403
ENSMUSG00000026730	protein_coding	Pter	ENSMUST00000028063	protein_coding		2	1	12924100	1652
ENSMUSG00000018599	protein_coding	Mief2	ENSMUST00000146159	processed_transcript		11	1	60728445	357
ENSMUSG00000095592	IG_D_gene	Ighd5-7	ENSMUST00000178483	IG_D_gene	principal1	12	-1	113464552	29
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000113471	protein_coding		19	1	6401702	535
ENSMUSG00000028081	protein_coding	Rps3a1	ENSMUST00000029722	protein_coding	principal1	3	-1	86142702	977
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000113469	protein_coding		19	1	6401718	439
ENSMUSG00000093876	IG_D_gene	Ighd5-3	ENSMUST00000179262	IG_D_gene	principal1	12	-1	113464770	10
ENSMUSG00000045746	lincRNA	B230317F23Rik	ENSMUST00000052189	lincRNA		8	1	60983437	2472
ENSMUSG00000026730	protein_coding	Pter	ENSMUST00000193742	processed_transcript		2	1	12924101	1576
ENSMUSG00000048458	protein_coding	Inka2	ENSMUST00000098273	protein_coding	alternative2	3	1	105705458	1868
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000133968	processed_transcript		19	1	6401719	442
ENSMUSG00000026730	protein_coding	Pter	ENSMUST00000195521	retained_intron		2	1	12977939	1948
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000176922	protein_coding		13	-1	8871023	3780
ENSMUSG00000108905	lincRNA	Gm44618	ENSMUST00000208431	lincRNA		7	1	28629248	2262
ENSMUSG00000115118	lincRNA	Gm36617	ENSMUST00000227185	lincRNA		15	1	59275396	674
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000191872	protein_coding		3	1	40950792	1505
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000130480	retained_intron		19	1	6402918	660
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000148906	retained_intron		19	1	6404582	384
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000200432	protein_coding		3	1	40950818	374
ENSMUSG00000030980	protein_coding	Knop1	ENSMUST00000106549	protein_coding	alternative2	7	-1	118855613	1467
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000135532	retained_intron		19	1	6404741	1517
ENSMUSG00000090751	protein_coding	Vmn2r63	ENSMUST00000163803	protein_coding	principal2	7	-1	42933822	9153
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000152022	retained_intron		19	1	6404827	8815
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000149205	retained_intron		19	1	6408405	919
ENSMUSG00000090751	protein_coding	Vmn2r63	ENSMUST00000233726	protein_coding	alternative2	7	-1	42933822	8982
ENSMUSG00000030980	protein_coding	Knop1	ENSMUST00000152309	protein_coding		7	-1	118855631	690
ENSMUSG00000090751	protein_coding	Vmn2r63	ENSMUST00000233303	protein_coding		7	-1	42933822	8925
ENSMUSG00000085338	lincRNA	2410004I01Rik	ENSMUST00000138424	lincRNA		11	-1	102964387	1187
ENSMUSG00000049630	protein_coding	C1ql3	ENSMUST00000061545	protein_coding	principal1	2	-1	13011806	2535
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000197092	processed_transcript		3	1	40961632	103
ENSMUSG00000015340	protein_coding	Cybb	ENSMUST00000015484	protein_coding	principal1	X	-1	9469324	4752
ENSMUSG00000090751	protein_coding	Vmn2r63	ENSMUST00000232761	protein_coding		7	-1	42933822	8801
ENSMUSG00000106962	TEC	Gm43633	ENSMUST00000202455	TEC		6	1	127485793	2330
ENSMUSG00000037246	protein_coding	H2-M10.5	ENSMUST00000041531	protein_coding	principal1	17	1	36772910	1383
ENSMUSG00000110161	bidirectional_promoter_lncRNA	Gm45494	ENSMUST00000211167	bidirectional_promoter_lncRNA		9	1	8004830	545
ENSMUSG00000080892	processed_pseudogene	Gm9266	ENSMUST00000117401	processed_pseudogene		7	1	42951724	484
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000164183	protein_coding		13	-1	8870979	1780
ENSMUSG00000030980	protein_coding	Knop1	ENSMUST00000116280	protein_coding	principal3	7	-1	118855998	5382
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000191998	processed_transcript		3	1	40971637	619
ENSMUSG00000015340	protein_coding	Cybb	ENSMUST00000164685	nonsense_mediated_decay		X	-1	9469269	792
ENSMUSG00000032946	protein_coding	Rasgrp2	ENSMUST00000167240	protein_coding	principal1	19	1	6400583	2192
ENSMUSG00000081036	processed_pseudogene	Gm14628	ENSMUST00000117508	processed_pseudogene		X	1	43823924	635
ENSMUSG00000015340	protein_coding	Cybb	ENSMUST00000154503	retained_intron		X	-1	9451533	566
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000176587	protein_coding		13	-1	8861222	699
ENSMUSG00000109379	TEC	Gm44550	ENSMUST00000207311	TEC		7	1	118785143	2058
ENSMUSG00000081704	processed_pseudogene	Gm14603	ENSMUST00000121275	processed_pseudogene		X	-1	44313717	448
ENSMUSG00000015340	protein_coding	Cybb	ENSMUST00000170885	protein_coding		X	-1	9487771	390
ENSMUSG00000043702	protein_coding	Pde12	ENSMUST00000052932	protein_coding	principal1	14	-1	26669883	7725
ENSMUSG00000015340	protein_coding	Cybb	ENSMUST00000131591	retained_intron		X	-1	9469270	928
ENSMUSG00000091490	protein_coding	Triml2	ENSMUST00000209200	protein_coding	principal1	8	1	43180541	1519
ENSMUSG00000084876	processed_transcript	Gm14965	ENSMUST00000124118	antisense		19	-1	6418606	565
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000177112	processed_transcript		13	-1	8870994	728
ENSMUSG00000084876	processed_transcript	Gm14965	ENSMUST00000131314	retained_intron		19	-1	6418606	967
ENSMUSG00000010097	protein_coding	Nxf1	ENSMUST00000010241	protein_coding	principal1	19	1	8757073	2326
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000175687	processed_transcript		13	-1	8858775	338
ENSMUSG00000108962	unprocessed_pseudogene	Gm44959	ENSMUST00000209127	unprocessed_pseudogene		8	-1	4722836	231
ENSMUSG00000050926	protein_coding	Dcaf12l2	ENSMUST00000115057	protein_coding	principal1	X	-1	44368342	2885
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000175958	protein_coding		13	-1	8871909	402
ENSMUSG00000082340	unprocessed_pseudogene	Gm11321	ENSMUST00000121257	unprocessed_pseudogene		13	-1	22932199	902
ENSMUSG00000091490	protein_coding	Triml2	ENSMUST00000210136	protein_coding	principal1	8	1	43180541	1552
ENSMUSG00000082268	unprocessed_pseudogene	Vmn1r-ps120	ENSMUST00000120288	unprocessed_pseudogene		13	-1	22940072	377
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000177404	protein_coding		13	-1	8871007	348
ENSMUSG00000091490	protein_coding	Triml2	ENSMUST00000209872	protein_coding		8	1	43180541	1395
ENSMUSG00000045475	protein_coding	Lce3c	ENSMUST00000055375	protein_coding	principal1	3	1	92944486	567
ENSMUSG00000091490	protein_coding	Triml2	ENSMUST00000211228	retained_intron		8	1	43185046	2318
ENSMUSG00000033735	protein_coding	Spr	ENSMUST00000204757	nonsense_mediated_decay		6	-1	85137766	3545
ENSMUSG00000021147	protein_coding	Wdr37	ENSMUST00000054251	protein_coding	principal1	13	-1	8871730	4626
ENSMUSG00000091490	protein_coding	Triml2	ENSMUST00000163869	protein_coding	principal1	8	1	43183119	1467
ENSMUSG00000041303	protein_coding	Gtf3c3	ENSMUST00000041638	protein_coding	principal1	1	-1	54438971	4582
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000191882	processed_transcript		3	1	41011088	1994
ENSMUSG00000033735	protein_coding	Spr	ENSMUST00000045986	protein_coding	principal1	6	-1	85137766	1230
ENSMUSG00000081391	processed_pseudogene	Gm11765	ENSMUST00000121173	processed_pseudogene		4	-1	81461732	1205
ENSMUSG00000032852	protein_coding	Rspo4	ENSMUST00000042217	protein_coding	principal1	2	1	151842927	2371
ENSMUSG00000043472	protein_coding	Lce3d	ENSMUST00000059053	protein_coding	principal1	3	1	92957390	491
ENSMUSG00000083385	processed_pseudogene	Gm11411	ENSMUST00000117951	processed_pseudogene		4	1	81696441	719
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000065411	retained_intron		3	1	41021939	4156
ENSMUSG00000024388	protein_coding	Myo7b	ENSMUST00000134663	protein_coding	principal1	18	-1	32036961	6621
ENSMUSG00000041303	protein_coding	Gtf3c3	ENSMUST00000190419	retained_intron		1	-1	54424054	470
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000025276	protein_coding	principal1	18	1	12168717	2170
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000192456	processed_transcript		3	1	41023833	1565
ENSMUSG00000041303	protein_coding	Gtf3c3	ENSMUST00000189906	retained_intron		1	-1	54428911	412
ENSMUSG00000033735	protein_coding	Spr	ENSMUST00000174769	protein_coding		6	-1	85137756	1029
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000197214	processed_transcript		3	1	41033515	328
ENSMUSG00000021209	protein_coding	Ppp4r4	ENSMUST00000021631	protein_coding	principal2	12	1	103532283	3964
ENSMUSG00000024388	protein_coding	Myo7b	ENSMUST00000238990	processed_transcript		18	-1	31983368	253
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000194006	processed_transcript		3	1	41033534	1555
ENSMUSG00000037997	protein_coding	Parp11	ENSMUST00000112191	protein_coding		6	1	127446840	3414
ENSMUSG00000086620	antisense	Rspo4os	ENSMUST00000152229	antisense		2	-1	151866960	1281
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000199797	processed_transcript		3	1	41036733	159
ENSMUSG00000085768	antisense	Gm13707	ENSMUST00000123663	antisense		2	1	73421909	600
ENSMUSG00000037247	lincRNA	Pldi	ENSMUST00000036304	lincRNA		10	-1	60938132	853
ENSMUSG00000085885	processed_transcript	Gm11906	ENSMUST00000124792	processed_transcript		4	1	24966517	680
ENSMUSG00000037130	protein_coding	H2-M10.6	ENSMUST00000041398	protein_coding	principal1	17	1	36812171	1407
ENSMUSG00000084824	antisense	Gm16344	ENSMUST00000150084	antisense		18	1	32021740	1567
ENSMUSG00000082817	unprocessed_pseudogene	Gm16428	ENSMUST00000121193	unprocessed_pseudogene		X	1	54130710	723
ENSMUSG00000085300	processed_pseudogene	Gm16345	ENSMUST00000146065	processed_pseudogene		18	1	32031089	158
ENSMUSG00000033735	protein_coding	Spr	ENSMUST00000174286	protein_coding		6	-1	85137762	775
ENSMUSG00000044681	protein_coding	Cnpy1	ENSMUST00000141601	protein_coding	principal1	5	-1	28245806	3018
ENSMUSG00000041747	protein_coding	Utp15	ENSMUST00000040972	protein_coding	principal1	13	-1	98263041	4120
ENSMUSG00000074433	protein_coding	Lce3e	ENSMUST00000098886	protein_coding	principal1	3	1	92967061	607
ENSMUSG00000021209	protein_coding	Ppp4r4	ENSMUST00000189871	nonsense_mediated_decay		12	1	103532570	2866
ENSMUSG00000106317	lincRNA	Gm43848	ENSMUST00000198060	lincRNA		3	-1	105727147	1247
ENSMUSG00000082775	processed_pseudogene	Itpa-ps3	ENSMUST00000119034	processed_pseudogene		X	-1	44467233	395
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000191805	protein_coding	principal1	3	1	40950631	1705
ENSMUSG00000098055	antisense	Gm26947	ENSMUST00000182497	antisense		10	1	60931991	2929
ENSMUSG00000081477	unprocessed_pseudogene	Gm7916	ENSMUST00000120325	unprocessed_pseudogene		X	1	54174779	456
ENSMUSG00000033389	protein_coding	Arhgap44	ENSMUST00000093002	protein_coding	alternative2	11	-1	65162904	3982
ENSMUSG00000044681	protein_coding	Cnpy1	ENSMUST00000118882	protein_coding		5	-1	28210022	1984
ENSMUSG00000041747	protein_coding	Utp15	ENSMUST00000225100	retained_intron		13	-1	98254157	634
ENSMUSG00000021209	protein_coding	Ppp4r4	ENSMUST00000187155	protein_coding	alternative1	12	1	103558431	2675
ENSMUSG00000109974	processed_pseudogene	Gm2221	ENSMUST00000209342	processed_pseudogene		8	1	43199968	418
ENSMUSG00000096308	unprocessed_pseudogene	Gm14598	ENSMUST00000180109	unprocessed_pseudogene		X	1	54237715	468
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000155431	nonsense_mediated_decay		18	1	12168739	725
ENSMUSG00000021209	protein_coding	Ppp4r4	ENSMUST00000190664	protein_coding		12	1	103581398	697
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000026862	protein_coding		3	1	41033944	1541
ENSMUSG00000044609	processed_pseudogene	Gm9294	ENSMUST00000165198	processed_pseudogene		7	-1	42954388	789
ENSMUSG00000084070	unprocessed_pseudogene	Gm6591	ENSMUST00000121063	unprocessed_pseudogene		X	1	54312878	434
ENSMUSG00000033389	protein_coding	Arhgap44	ENSMUST00000093001	protein_coding		11	-1	65162567	2256
ENSMUSG00000087540	lincRNA	Gm11412	ENSMUST00000144875	lincRNA		4	1	81743146	2800
ENSMUSG00000041747	protein_coding	Utp15	ENSMUST00000224842	retained_intron		13	-1	98263013	2328
ENSMUSG00000021209	protein_coding	Ppp4r4	ENSMUST00000190151	protein_coding		12	1	103598220	346
ENSMUSG00000030839	protein_coding	Sergef	ENSMUST00000033127	protein_coding	principal1	7	-1	46639807	1465
ENSMUSG00000035437	protein_coding	Rabgap1	ENSMUST00000133434	protein_coding		2	1	37443279	1594
ENSMUSG00000084306	processed_pseudogene	Gm11743	ENSMUST00000117385	processed_pseudogene		2	1	144756329	1735
ENSMUSG00000025762	protein_coding	Larp1b	ENSMUST00000099121	protein_coding		3	1	41024373	1030
ENSMUSG00000042742	protein_coding	Bmt2	ENSMUST00000045235	protein_coding	principal1	6	-1	13677966	4143
ENSMUSG00000068885	protein_coding	Lce3f	ENSMUST00000090863	protein_coding	principal1	3	1	92992226	611
ENSMUSG00000030839	protein_coding	Sergef	ENSMUST00000216505	nonsense_mediated_decay		7	-1	46639804	2551
ENSMUSG00000105517	TEC	Gm42436	ENSMUST00000198804	TEC		3	1	41002434	3656
ENSMUSG00000108497	lincRNA	Gm44738	ENSMUST00000206393	lincRNA		7	-1	73627435	371
ENSMUSG00000087608	lincRNA	Gm12914	ENSMUST00000148635	lincRNA		4	-1	81932374	305
ENSMUSG00000105674	TEC	Gm42437	ENSMUST00000197263	TEC		3	-1	41006437	923
ENSMUSG00000108311	lincRNA	Gm44737	ENSMUST00000206950	lincRNA		7	1	73630617	2355
ENSMUSG00000030839	protein_coding	Sergef	ENSMUST00000156147	processed_transcript		7	-1	46603242	662
ENSMUSG00000042742	protein_coding	Bmt2	ENSMUST00000203078	protein_coding		6	-1	13677938	4462
ENSMUSG00000093568	lincRNA	Gm20611	ENSMUST00000177492	lincRNA		10	1	61031303	1131
ENSMUSG00000108550	lincRNA	Gm44736	ENSMUST00000205943	lincRNA		7	-1	73672390	667
ENSMUSG00000044681	protein_coding	Cnpy1	ENSMUST00000120068	protein_coding		5	-1	28237873	2284
ENSMUSG00000093489	lincRNA	Gm20625	ENSMUST00000177065	lincRNA		10	-1	61042811	698
ENSMUSG00000108473	lincRNA	Gm44739	ENSMUST00000205294	lincRNA		7	-1	73678305	1426
ENSMUSG00000061065	protein_coding	H2al1o	ENSMUST00000079952	protein_coding	principal1	X	-1	9572409	509
ENSMUSG00000030839	protein_coding	Sergef	ENSMUST00000125825	retained_intron		7	-1	46635947	778
ENSMUSG00000094153	processed_pseudogene	Gm8807	ENSMUST00000179328	processed_pseudogene		18	-1	75182814	622
ENSMUSG00000033389	protein_coding	Arhgap44	ENSMUST00000130420	protein_coding		11	-1	65059834	3391
ENSMUSG00000108337	processed_pseudogene	Gm4971	ENSMUST00000205991	processed_pseudogene		7	-1	73686601	1108
ENSMUSG00000044681	protein_coding	Cnpy1	ENSMUST00000117098	protein_coding		5	-1	28210168	2661
ENSMUSG00000035437	protein_coding	Rabgap1	ENSMUST00000153145	retained_intron		2	1	37443296	1746
ENSMUSG00000035437	protein_coding	Rabgap1	ENSMUST00000203470	processed_transcript		2	1	37451636	2153
ENSMUSG00000100859	lincRNA	Gm28725	ENSMUST00000189280	lincRNA		Y	-1	28848727	437
ENSMUSG00000108485	processed_pseudogene	Gm18805	ENSMUST00000206872	processed_pseudogene		7	-1	73689167	655
ENSMUSG00000030839	protein_coding	Sergef	ENSMUST00000135035	protein_coding		7	-1	46639631	722
ENSMUSG00000044681	protein_coding	Cnpy1	ENSMUST00000141196	protein_coding		5	-1	28210363	238
ENSMUSG00000100859	lincRNA	Gm28725	ENSMUST00000187372	lincRNA		Y	-1	28848727	622
ENSMUSG00000108687	processed_pseudogene	Gm45007	ENSMUST00000206237	processed_pseudogene		7	-1	73706540	366
ENSMUSG00000094485	unprocessed_pseudogene	Gm11322	ENSMUST00000118095	unprocessed_pseudogene		13	-1	22944246	435
ENSMUSG00000087110	lincRNA	Gm11264	ENSMUST00000143755	lincRNA		4	-1	82065890	2969
ENSMUSG00000030839	protein_coding	Sergef	ENSMUST00000137988	processed_transcript		7	-1	46639580	671
ENSMUSG00000099424	lincRNA	Gm28641	ENSMUST00000187783	lincRNA		2	1	7529939	335
ENSMUSG00000085022	lincRNA	Gm5860	ENSMUST00000161588	lincRNA		4	1	82065957	301
ENSMUSG00000033389	protein_coding	Arhgap44	ENSMUST00000047463	protein_coding	principal2	11	-1	65162961	4074
ENSMUSG00000010097	protein_coding	Nxf1	ENSMUST00000184970	protein_coding		19	1	8757107	4042
ENSMUSG00000085022	lincRNA	Gm5860	ENSMUST00000137810	lincRNA		4	1	82065431	1028
ENSMUSG00000035437	protein_coding	Rabgap1	ENSMUST00000148470	protein_coding		2	1	37452245	615
ENSMUSG00000010097	protein_coding	Nxf1	ENSMUST00000183780	processed_transcript		19	1	8757119	590
ENSMUSG00000110316	sense_intronic	Gm45311	ENSMUST00000211086	sense_intronic		7	-1	46512780	1330
ENSMUSG00000082857	processed_pseudogene	Gm12293	ENSMUST00000121898	processed_pseudogene		11	-1	65170433	590
ENSMUSG00000085022	lincRNA	Gm5860	ENSMUST00000151038	lincRNA		4	1	82065873	1711
ENSMUSG00000010097	protein_coding	Nxf1	ENSMUST00000184756	nonsense_mediated_decay		19	1	8757150	567
ENSMUSG00000118601	antisense	AL663045.1	ENSMUST00000239306	antisense		11	1	65159959	814
ENSMUSG00000087492	antisense	Gm15700	ENSMUST00000139791	antisense		7	1	46561301	821
ENSMUSG00000010097	protein_coding	Nxf1	ENSMUST00000183939	protein_coding		19	1	8757150	1017
ENSMUSG00000110272	TEC	Gm45310	ENSMUST00000210436	TEC		7	-1	46561725	275
ENSMUSG00000113474	processed_pseudogene	Gm48110	ENSMUST00000223259	processed_pseudogene		12	1	87537905	400
ENSMUSG00000064141	protein_coding	Zfp69	ENSMUST00000106280	protein_coding	principal1	4	-1	120951699	2362
ENSMUSG00000010097	protein_coding	Nxf1	ENSMUST00000185056	retained_intron		19	1	8766677	927
ENSMUSG00000113803	processed_pseudogene	Gm18615	ENSMUST00000222919	processed_pseudogene		12	-1	87543251	1031
ENSMUSG00000020548	protein_coding	1700086D15Rik	ENSMUST00000108696	protein_coding	principal1	11	-1	65159891	1092
ENSMUSG00000010097	protein_coding	Nxf1	ENSMUST00000184387	retained_intron		19	1	8767011	519
ENSMUSG00000020548	protein_coding	1700086D15Rik	ENSMUST00000020855	protein_coding	principal1	11	-1	65159890	1092
ENSMUSG00000010097	protein_coding	Nxf1	ENSMUST00000184826	protein_coding		19	1	8768635	505
ENSMUSG00000010097	protein_coding	Nxf1	ENSMUST00000183898	processed_transcript		19	1	8770092	431
ENSMUSG00000064141	protein_coding	Zfp69	ENSMUST00000130702	protein_coding		4	-1	120947816	870
ENSMUSG00000010097	protein_coding	Nxf1	ENSMUST00000184808	retained_intron		19	1	8770136	474
ENSMUSG00000064141	protein_coding	Zfp69	ENSMUST00000132839	retained_intron		4	-1	120934686	554
ENSMUSG00000028327	protein_coding	Stra6l	ENSMUST00000107783	protein_coding	principal3	4	1	45848664	3669
ENSMUSG00000064141	protein_coding	Zfp69	ENSMUST00000106281	protein_coding	principal1	4	-1	120949434	1764
ENSMUSG00000075289	protein_coding	Carns1	ENSMUST00000237815	protein_coding		19	-1	4170028	2371
ENSMUSG00000051176	protein_coding	Zfp42	ENSMUST00000211248	protein_coding	principal1	8	-1	43306936	1837
ENSMUSG00000028327	protein_coding	Stra6l	ENSMUST00000107782	protein_coding	alternative2	4	1	45848816	4009
ENSMUSG00000027460	protein_coding	Angpt4	ENSMUST00000028955	protein_coding	principal1	2	1	151911210	2335
ENSMUSG00000051176	protein_coding	Zfp42	ENSMUST00000209356	protein_coding	principal1	8	-1	43306950	1744
ENSMUSG00000030092	protein_coding	Cntn6	ENSMUST00000161446	protein_coding		6	1	104492790	673
ENSMUSG00000037997	protein_coding	Parp11	ENSMUST00000112195	protein_coding		6	1	127449263	733
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000127123	retained_intron		18	1	12168752	2297
ENSMUSG00000028327	protein_coding	Stra6l	ENSMUST00000128947	processed_transcript		4	1	45848997	734
ENSMUSG00000037997	protein_coding	Parp11	ENSMUST00000128470	retained_intron		6	1	127453620	931
ENSMUSG00000051176	protein_coding	Zfp42	ENSMUST00000082120	protein_coding	principal1	8	-1	43306980	1772
ENSMUSG00000027430	protein_coding	Dtd1	ENSMUST00000028917	protein_coding	principal1	2	1	144599897	1350
ENSMUSG00000028327	protein_coding	Stra6l	ENSMUST00000165478	retained_intron		4	1	45874211	7254
ENSMUSG00000028327	protein_coding	Stra6l	ENSMUST00000030011	protein_coding	principal3	4	1	45848947	3606
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000134046	protein_coding		18	1	12179570	424
ENSMUSG00000037997	protein_coding	Parp11	ENSMUST00000144115	nonsense_mediated_decay		6	1	127453648	660
ENSMUSG00000028259	protein_coding	Fhl5	ENSMUST00000029922	protein_coding	principal1	4	-1	25242876	1106
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000138866	nonsense_mediated_decay		18	1	12180525	595
ENSMUSG00000037997	protein_coding	Parp11	ENSMUST00000125364	retained_intron		6	1	127453666	500
ENSMUSG00000093573	lincRNA	Gm20610	ENSMUST00000176406	lincRNA		10	-1	61051900	587
ENSMUSG00000064224	protein_coding	Gsdma3	ENSMUST00000107508	protein_coding	alternative2	11	1	98626360	1587
ENSMUSG00000021877	protein_coding	Arf4	ENSMUST00000022429	protein_coding	principal1	14	1	26638074	2165
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000139151	retained_intron		18	1	12185431	3776
ENSMUSG00000118652	lincRNA	AL645799.1	ENSMUST00000239419	lincRNA		13	1	32614016	358
ENSMUSG00000037469	protein_coding	Acp7	ENSMUST00000159560	protein_coding	alternative2	7	-1	28630568	2207
ENSMUSG00000037997	protein_coding	Parp11	ENSMUST00000112193	protein_coding		6	1	127453675	1725
ENSMUSG00000017922	protein_coding	Prl3c1	ENSMUST00000018066	protein_coding	principal3	13	1	27196659	823
ENSMUSG00000028259	protein_coding	Fhl5	ENSMUST00000108204	protein_coding	principal1	4	-1	25242876	1171
ENSMUSG00000027430	protein_coding	Dtd1	ENSMUST00000145602	processed_transcript		2	1	144738414	408
ENSMUSG00000000581	protein_coding	C1d	ENSMUST00000000594	protein_coding	principal1	11	1	17257594	2981
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000153233	retained_intron		18	1	12185655	913
ENSMUSG00000064224	protein_coding	Gsdma3	ENSMUST00000073295	protein_coding	principal2	11	1	98626360	1477
ENSMUSG00000027430	protein_coding	Dtd1	ENSMUST00000145814	processed_transcript		2	1	144616618	788
ENSMUSG00000040372	protein_coding	Gpr63	ENSMUST00000151006	processed_transcript		4	1	24966407	389
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000234814	retained_intron		18	1	12188825	652
ENSMUSG00000000581	protein_coding	C1d	ENSMUST00000156784	protein_coding		11	1	17257688	684
ENSMUSG00000037469	protein_coding	Acp7	ENSMUST00000239470	protein_coding	alternative2	7	-1	28631067	1978
ENSMUSG00000027430	protein_coding	Dtd1	ENSMUST00000125683	processed_transcript		2	1	144731814	754
ENSMUSG00000078670	protein_coding	Fam174b	ENSMUST00000107456	protein_coding	principal1	7	1	73740302	2683
ENSMUSG00000017922	protein_coding	Prl3c1	ENSMUST00000110364	protein_coding	alternative2	13	1	27198903	850
ENSMUSG00000021877	protein_coding	Arf4	ENSMUST00000166075	nonsense_mediated_decay		14	1	26638226	1582
ENSMUSG00000000581	protein_coding	C1d	ENSMUST00000131227	processed_transcript		11	1	17257579	343
ENSMUSG00000037469	protein_coding	Acp7	ENSMUST00000159418	protein_coding		7	-1	28630507	764
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000234457	protein_coding		18	1	12188852	476
ENSMUSG00000027430	protein_coding	Dtd1	ENSMUST00000137406	processed_transcript		2	1	144678098	601
ENSMUSG00000021877	protein_coding	Arf4	ENSMUST00000224138	retained_intron		14	1	26638243	1034
ENSMUSG00000037997	protein_coding	Parp11	ENSMUST00000039680	protein_coding	principal1	6	1	127453723	3746
ENSMUSG00000017922	protein_coding	Prl3c1	ENSMUST00000178072	protein_coding	alternative2	13	1	27199353	579
ENSMUSG00000021877	protein_coding	Arf4	ENSMUST00000171282	processed_transcript		14	1	26638253	1345
ENSMUSG00000037469	protein_coding	Acp7	ENSMUST00000159095	protein_coding		7	-1	28630500	344
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000030076	protein_coding	alternative1	4	-1	59549364	6855
ENSMUSG00000104619	lincRNA	Gm42678	ENSMUST00000197163	lincRNA		3	1	102599373	2221
ENSMUSG00000067064	protein_coding	Olfr1416	ENSMUST00000214928	protein_coding	principal1	1	-1	92485113	4838
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000134756	retained_intron		18	1	12188992	563
ENSMUSG00000000581	protein_coding	C1d	ENSMUST00000135568	processed_transcript		11	1	17257592	625
ENSMUSG00000078670	protein_coding	Fam174b	ENSMUST00000205946	protein_coding		7	1	73765872	422
ENSMUSG00000021877	protein_coding	Arf4	ENSMUST00000112318	protein_coding		14	1	26638347	1367
ENSMUSG00000086707	lincRNA	Gm12088	ENSMUST00000137364	lincRNA		11	1	29595787	520
ENSMUSG00000080714	processed_pseudogene	Gm14602	ENSMUST00000118625	processed_pseudogene		X	-1	44529790	340
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000171229	protein_coding	alternative2	13	-1	34994144	1426
ENSMUSG00000040372	protein_coding	Gpr63	ENSMUST00000038920	protein_coding	principal1	4	1	24973419	2370
ENSMUSG00000078670	protein_coding	Fam174b	ENSMUST00000206337	retained_intron		7	1	73765936	778
ENSMUSG00000037997	protein_coding	Parp11	ENSMUST00000201717	retained_intron		6	1	127471527	1759
ENSMUSG00000067064	protein_coding	Olfr1416	ENSMUST00000086837	protein_coding	principal1	1	-1	92480619	939
ENSMUSG00000037469	protein_coding	Acp7	ENSMUST00000162880	protein_coding		7	-1	28631332	454
ENSMUSG00000007888	protein_coding	Crlf1	ENSMUST00000008032	protein_coding	principal1	8	1	70493158	1644
ENSMUSG00000000581	protein_coding	C1d	ENSMUST00000130330	processed_transcript		11	1	17263621	416
ENSMUSG00000104685	processed_pseudogene	Gm19202	ENSMUST00000198096	processed_pseudogene		3	-1	102686717	808
ENSMUSG00000075289	protein_coding	Carns1	ENSMUST00000167055	protein_coding	principal1	19	-1	4175479	3968
ENSMUSG00000085893	processed_pseudogene	Gm12091	ENSMUST00000146791	processed_pseudogene		11	-1	29602613	830
ENSMUSG00000021877	protein_coding	Arf4	ENSMUST00000171207	retained_intron		14	1	26653011	188
ENSMUSG00000024410	protein_coding	Rmc1	ENSMUST00000234982	protein_coding		18	1	12189171	534
ENSMUSG00000037997	protein_coding	Parp11	ENSMUST00000136945	retained_intron		6	1	127474146	1187
ENSMUSG00000024413	protein_coding	Npc1	ENSMUST00000234044	retained_intron		18	-1	12195407	2219
ENSMUSG00000021877	protein_coding	Arf4	ENSMUST00000167376	nonsense_mediated_decay		14	1	26653131	700
ENSMUSG00000091890	TEC	A830073O21Rik	ENSMUST00000205693	TEC		7	-1	73741024	3096
ENSMUSG00000037997	protein_coding	Parp11	ENSMUST00000134018	retained_intron		6	1	127477655	515
ENSMUSG00000091890	TEC	A830073O21Rik	ENSMUST00000169090	TEC		7	-1	73740917	2025
ENSMUSG00000046219	processed_transcript	C230012O17Rik	ENSMUST00000133431	processed_transcript		4	-1	24966616	2510
ENSMUSG00000084850	lincRNA	Gm12092	ENSMUST00000125194	lincRNA		11	-1	29645509	600
ENSMUSG00000093996	protein_coding	Fam205a3	ENSMUST00000178192	protein_coding	principal1	4	1	42318272	4128
ENSMUSG00000075289	protein_coding	Carns1	ENSMUST00000236513	retained_intron		19	-1	4175454	3762
ENSMUSG00000108412	TEC	Gm45005	ENSMUST00000206640	TEC		7	1	73754589	157
ENSMUSG00000046219	processed_transcript	C230012O17Rik	ENSMUST00000130085	processed_transcript		4	-1	24967083	2999
ENSMUSG00000090861	antisense	Arf4os	ENSMUST00000166902	antisense		14	-1	26638183	566
ENSMUSG00000081060	unprocessed_pseudogene	Gm11318	ENSMUST00000118640	unprocessed_pseudogene		13	1	22960813	961
ENSMUSG00000023505	protein_coding	Cdca3	ENSMUST00000150120	protein_coding		6	1	124829547	761
ENSMUSG00000021453	protein_coding	Gadd45g	ENSMUST00000021903	protein_coding	principal1	13	1	51846678	1071
ENSMUSG00000075289	protein_coding	Carns1	ENSMUST00000237326	processed_transcript		19	-1	4169415	457
ENSMUSG00000095897	IG_D_gene	Ighd2-5	ENSMUST00000178549	IG_D_gene	principal1	12	-1	113466043	17
ENSMUSG00000037469	protein_coding	Acp7	ENSMUST00000040112	protein_coding	principal2	7	-1	28631015	1923
ENSMUSG00000015759	protein_coding	Cnih1	ENSMUST00000015903	protein_coding	principal1	14	-1	46788411	1538
ENSMUSG00000083917	processed_pseudogene	Gm12093	ENSMUST00000120906	processed_pseudogene		11	-1	29689835	1405
ENSMUSG00000046219	processed_transcript	C230012O17Rik	ENSMUST00000139588	processed_transcript		4	-1	24967449	605
ENSMUSG00000075289	protein_coding	Carns1	ENSMUST00000237988	retained_intron		19	-1	4171456	466
ENSMUSG00000007888	protein_coding	Crlf1	ENSMUST00000132648	protein_coding		8	1	70493361	387
ENSMUSG00000103203	IG_D_gene	Gm37327	ENSMUST00000193012	IG_D_gene	principal1	12	-1	113469217	29
ENSMUSG00000108865	processed_transcript	Gm44617	ENSMUST00000207408	retained_intron		7	1	28640443	3643
ENSMUSG00000075289	protein_coding	Carns1	ENSMUST00000235912	processed_transcript		19	-1	4171877	607
ENSMUSG00000047603	protein_coding	Zfp235	ENSMUST00000205834	retained_intron		7	1	24134169	1933
ENSMUSG00000108865	processed_transcript	Gm44617	ENSMUST00000209122	lincRNA		7	1	28642387	2763
ENSMUSG00000032021	protein_coding	Crtam	ENSMUST00000180872	protein_coding		9	-1	40984467	4443
ENSMUSG00000075289	protein_coding	Carns1	ENSMUST00000235984	retained_intron		19	-1	4175479	471
ENSMUSG00000007888	protein_coding	Crlf1	ENSMUST00000127983	protein_coding		8	1	70501133	544
ENSMUSG00000015759	protein_coding	Cnih1	ENSMUST00000227583	retained_intron		14	-1	46780262	781
ENSMUSG00000096396	IG_D_gene	Ighd5-2	ENSMUST00000179166	IG_D_gene	principal1	12	-1	113469435	10
ENSMUSG00000102662	TEC	Gm38377	ENSMUST00000193253	TEC		2	1	69018096	3772
ENSMUSG00000097233	antisense	Gm17552	ENSMUST00000181211	antisense		19	1	4169566	3877
ENSMUSG00000047603	protein_coding	Zfp235	ENSMUST00000205736	processed_transcript		7	1	24134174	1297
ENSMUSG00000104262	TEC	Gm37747	ENSMUST00000193717	TEC		2	1	68989381	4003
ENSMUSG00000103546	TEC	Gm37666	ENSMUST00000194110	TEC		2	1	69013612	866
ENSMUSG00000039670	protein_coding	Oxld1	ENSMUST00000044007	protein_coding	principal2	11	-1	120458068	813
ENSMUSG00000021453	protein_coding	Gadd45g	ENSMUST00000132480	retained_intron		13	1	51846744	863
ENSMUSG00000095444	IG_D_gene	Ighd2-4	ENSMUST00000179560	IG_D_gene	principal1	12	-1	113470710	17
ENSMUSG00000015759	protein_coding	Cnih1	ENSMUST00000146629	protein_coding		14	-1	46788334	789
ENSMUSG00000047603	protein_coding	Zfp235	ENSMUST00000205680	protein_coding		7	1	24134196	1332
ENSMUSG00000096301	IG_D_pseudogene	Ighd6-2	ENSMUST00000178902	IG_D_pseudogene		12	-1	113474903	29
ENSMUSG00000063900	protein_coding	Adam26b	ENSMUST00000080135	protein_coding	principal1	8	-1	43528106	2476
ENSMUSG00000047603	protein_coding	Zfp235	ENSMUST00000205740	retained_intron		7	1	24134207	494
ENSMUSG00000090244	antisense	Gm16572	ENSMUST00000160258	antisense		12	1	81587799	279
ENSMUSG00000023505	protein_coding	Cdca3	ENSMUST00000024270	protein_coding	principal1	6	1	124829688	1976
ENSMUSG00000039670	protein_coding	Oxld1	ENSMUST00000137632	protein_coding	alternative2	11	-1	120457936	372
ENSMUSG00000089806	processed_pseudogene	Gm16570	ENSMUST00000161951	processed_pseudogene		12	-1	81589870	436
ENSMUSG00000047603	protein_coding	Zfp235	ENSMUST00000206809	processed_transcript		7	1	24134228	1024
ENSMUSG00000105498	processed_pseudogene	Gm42677	ENSMUST00000196363	processed_pseudogene		3	-1	102686861	127
ENSMUSG00000117905	processed_transcript	Gm50230	ENSMUST00000235329	retained_intron		19	-1	4191047	3709
ENSMUSG00000047603	protein_coding	Zfp235	ENSMUST00000056549	protein_coding	principal1	7	1	24134242	3373
ENSMUSG00000032021	protein_coding	Crtam	ENSMUST00000188848	protein_coding	principal3	9	-1	41004586	5001
ENSMUSG00000023505	protein_coding	Cdca3	ENSMUST00000131847	protein_coding		6	1	124830217	785
ENSMUSG00000040359	protein_coding	Ufl1	ENSMUST00000142949	retained_intron		4	-1	25281760	5189
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000021854	protein_coding	principal3	13	-1	34994281	1746
ENSMUSG00000032021	protein_coding	Crtam	ENSMUST00000180384	protein_coding	alternative2	9	-1	41004628	5046
ENSMUSG00000115003	antisense	Gm48933	ENSMUST00000226700	antisense		14	1	46787633	898
ENSMUSG00000023505	protein_coding	Cdca3	ENSMUST00000134637	retained_intron		6	1	124830235	1917
ENSMUSG00000023505	protein_coding	Cdca3	ENSMUST00000136692	retained_intron		6	1	124830363	874
ENSMUSG00000030411	protein_coding	Nova2	ENSMUST00000032571	protein_coding		7	1	18925888	8372
ENSMUSG00000020098	protein_coding	Pcbd1	ENSMUST00000218005	protein_coding		10	1	61089331	361
ENSMUSG00000023505	protein_coding	Cdca3	ENSMUST00000151674	protein_coding		6	1	124830375	612
ENSMUSG00000030411	protein_coding	Nova2	ENSMUST00000220302	protein_coding	principal1	7	1	18925888	8372
ENSMUSG00000032021	protein_coding	Crtam	ENSMUST00000034519	protein_coding	alternative2	9	-1	41004586	1876
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000110251	protein_coding	alternative2	13	-1	34994132	1395
ENSMUSG00000079064	unprocessed_pseudogene	Vmn1r-ps123	ENSMUST00000110449	unprocessed_pseudogene		13	-1	22996500	237
ENSMUSG00000068962	protein_coding	Zfp114	ENSMUST00000205309	protein_coding		7	1	24175060	1037
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000090150	protein_coding	principal1	15	-1	37792433	3733
ENSMUSG00000027913	protein_coding	Crct1	ENSMUST00000029521	protein_coding	principal1	3	-1	93015687	718
ENSMUSG00000037278	protein_coding	Tmem97	ENSMUST00000103242	protein_coding	principal1	11	-1	78550777	1375
ENSMUSG00000094698	unprocessed_pseudogene	Gm14596	ENSMUST00000180268	unprocessed_pseudogene		X	1	54350695	537
ENSMUSG00000081638	unprocessed_pseudogene	Gm14594	ENSMUST00000118052	unprocessed_pseudogene		X	1	54441739	537
ENSMUSG00000020098	protein_coding	Pcbd1	ENSMUST00000020298	protein_coding	principal1	10	1	61089359	789
ENSMUSG00000045284	protein_coding	Dcaf12l1	ENSMUST00000060481	protein_coding	principal1	X	-1	44790197	3509
ENSMUSG00000068962	protein_coding	Zfp114	ENSMUST00000206547	protein_coding	principal2	7	1	24175086	3154
ENSMUSG00000102337	processed_pseudogene	Gm37232	ENSMUST00000194887	processed_pseudogene		1	-1	167296399	367
ENSMUSG00000102532	IG_pseudogene	Gm37227	ENSMUST00000192089	IG_pseudogene		12	-1	113475121	10
ENSMUSG00000027913	protein_coding	Crct1	ENSMUST00000107301	protein_coding	principal1	3	-1	93015669	460
ENSMUSG00000073209	protein_coding	Klf14	ENSMUST00000101589	protein_coding	principal1	6	-1	30959078	3056
ENSMUSG00000045284	protein_coding	Dcaf12l1	ENSMUST00000115056	protein_coding	principal1	X	-1	44790161	3495
ENSMUSG00000118573	processed_pseudogene	AL671118.1	ENSMUST00000238955	processed_pseudogene		X	-1	9573778	265
ENSMUSG00000097495	lincRNA	Gm26651	ENSMUST00000181851	lincRNA		13	1	51973214	2325
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000120746	protein_coding	principal1	15	-1	37459360	3407
ENSMUSG00000096568	IG_D_gene	Ighd2-3	ENSMUST00000177839	IG_D_gene	principal1	12	-1	113475416	17
ENSMUSG00000068962	protein_coding	Zfp114	ENSMUST00000086010	protein_coding	alternative2	7	1	24177361	3332
ENSMUSG00000105570	lincRNA	Gm42682	ENSMUST00000198349	lincRNA		3	1	102714252	1265
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000174586	protein_coding	alternative1	4	-1	59549295	6640
ENSMUSG00000095399	IG_D_pseudogene	Ighd6-1	ENSMUST00000170385	IG_D_pseudogene		12	-1	113480171	29
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000166109	processed_transcript		13	-1	34988822	943
ENSMUSG00000026179	protein_coding	Pnkd	ENSMUST00000027370	protein_coding	principal2	1	1	74285045	2937
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000164421	retained_intron		13	-1	34989565	427
ENSMUSG00000095234	protein_coding	Gm21586	ENSMUST00000238328	protein_coding	principal1	4	1	42438970	378
ENSMUSG00000105677	sense_intronic	Gm43328	ENSMUST00000198544	sense_intronic		3	-1	105733877	1434
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000084345	retained_intron		13	-1	34988356	466
ENSMUSG00000076630	IG_D_gene	Ighd1-1	ENSMUST00000103439	IG_D_gene	principal1	12	-1	113482192	23
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000119730	protein_coding	principal1	15	-1	37459349	3295
ENSMUSG00000095234	protein_coding	Gm21586	ENSMUST00000107988	protein_coding	principal1	4	1	42439378	264
ENSMUSG00000106341	sense_intronic	Gm43330	ENSMUST00000199706	sense_intronic		3	-1	105785027	2153
ENSMUSG00000104910	sense_intronic	Gm43331	ENSMUST00000197991	sense_intronic		3	-1	105789321	1689
ENSMUSG00000048516	protein_coding	Adam26a	ENSMUST00000049577	protein_coding	principal1	8	-1	43576707	2489
ENSMUSG00000105842	sense_intronic	Gm43329	ENSMUST00000200120	sense_intronic		3	-1	105770197	3232
ENSMUSG00000083176	processed_pseudogene	D11Bhm181e	ENSMUST00000122252	processed_pseudogene		11	-1	78561600	282
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000116445	protein_coding	principal1	15	-1	37458541	858
ENSMUSG00000060024	protein_coding	Vmn1r213	ENSMUST00000228758	protein_coding	principal2	13	1	23007656	5975
ENSMUSG00000082804	processed_pseudogene	Rpl17-ps1	ENSMUST00000119156	processed_pseudogene		1	1	61075674	552
ENSMUSG00000102173	TEC	Gm37872	ENSMUST00000192362	TEC		13	-1	52021927	886
ENSMUSG00000026179	protein_coding	Pnkd	ENSMUST00000129219	retained_intron		1	1	74285050	881
ENSMUSG00000053368	protein_coding	Rxfp2	ENSMUST00000065745	protein_coding	principal1	5	1	150018675	2539
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000153775	protein_coding		15	-1	37734370	794
ENSMUSG00000060024	protein_coding	Vmn1r213	ENSMUST00000228031	protein_coding	alternative2	13	1	23007656	3367
ENSMUSG00000026179	protein_coding	Pnkd	ENSMUST00000138620	retained_intron		1	1	74285054	435
ENSMUSG00000060024	protein_coding	Vmn1r213	ENSMUST00000227573	protein_coding	alternative2	13	1	23007656	3515
ENSMUSG00000000318	protein_coding	Clec10a	ENSMUST00000144935	protein_coding		11	1	70156197	789
ENSMUSG00000060024	protein_coding	Vmn1r213	ENSMUST00000076897	protein_coding	principal2	13	1	23011249	1155
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000170538	protein_coding		13	-1	35027094	828
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000148652	protein_coding		15	-1	37792000	787
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000102883	protein_coding	principal4	4	-1	59549284	3409
ENSMUSG00000053368	protein_coding	Rxfp2	ENSMUST00000110496	protein_coding		5	1	150018675	2467
ENSMUSG00000051804	protein_coding	Adam6b	ENSMUST00000063317	protein_coding	principal1	12	1	113489511	2547
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000132423	processed_transcript		15	-1	37459332	709
ENSMUSG00000097998	lincRNA	Gm27019	ENSMUST00000183056	lincRNA		6	-1	31063495	404
ENSMUSG00000026179	protein_coding	Pnkd	ENSMUST00000087226	protein_coding	alternative2	1	1	74285055	3054
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000173699	protein_coding		4	-1	59549243	2721
ENSMUSG00000082656	unprocessed_pseudogene	Vmn1r-ps125	ENSMUST00000117767	unprocessed_pseudogene		13	1	23023251	290
ENSMUSG00000053368	protein_coding	Rxfp2	ENSMUST00000201612	protein_coding		5	1	150018706	2470
ENSMUSG00000038891	protein_coding	Prl3b1	ENSMUST00000225089	protein_coding		13	1	27241847	698
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000150453	protein_coding		15	-1	37792570	720
ENSMUSG00000007279	protein_coding	Scube2	ENSMUST00000007423	protein_coding	alternative2	7	-1	109865586	3571
ENSMUSG00000026179	protein_coding	Pnkd	ENSMUST00000152492	retained_intron		1	1	74285777	416
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000226924	retained_intron		15	-1	37459035	1992
ENSMUSG00000086745	antisense	Tspan2os	ENSMUST00000146624	antisense		3	-1	102735417	590
ENSMUSG00000093818	IG_D_gene	Ighd3-1	ENSMUST00000180266	IG_D_gene	principal1	12	-1	113525329	17
ENSMUSG00000053368	protein_coding	Rxfp2	ENSMUST00000138901	retained_intron		5	1	150065870	2836
ENSMUSG00000105855	antisense	Gm42681	ENSMUST00000197999	antisense		3	-1	102784789	1611
ENSMUSG00000108428	antisense	Gm45058	ENSMUST00000205810	antisense		7	-1	18988324	766
ENSMUSG00000027035	protein_coding	Cers6	ENSMUST00000028426	protein_coding	principal3	2	1	68861441	7038
ENSMUSG00000082661	processed_pseudogene	Gm11590	ENSMUST00000118999	processed_pseudogene		1	-1	61124004	1455
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000137944	processed_transcript		15	-1	37734634	2277
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000163280	protein_coding		13	-1	35027094	779
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000123317	processed_transcript		15	-1	37792239	662
ENSMUSG00000053368	protein_coding	Rxfp2	ENSMUST00000131212	processed_transcript		5	1	150080622	1306
ENSMUSG00000095549	IG_D_pseudogene	Ighd5-1	ENSMUST00000178811	IG_D_pseudogene		12	-1	113526809	10
ENSMUSG00000027035	protein_coding	Cers6	ENSMUST00000183755	retained_intron		2	1	68861442	1283
ENSMUSG00000051359	protein_coding	Ncald	ENSMUST00000168992	protein_coding	principal1	15	-1	37792000	3538
ENSMUSG00000051965	protein_coding	Nanos2	ENSMUST00000063563	protein_coding	principal1	7	1	18987400	1563
ENSMUSG00000031530	protein_coding	Dusp4	ENSMUST00000033930	protein_coding	principal1	8	1	34807297	2740
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000170989	protein_coding		13	-1	34994123	945
ENSMUSG00000007279	protein_coding	Scube2	ENSMUST00000106729	protein_coding	principal2	7	-1	109865679	3563
ENSMUSG00000035765	protein_coding	Dym	ENSMUST00000236220	protein_coding		18	1	75018781	1571
ENSMUSG00000084316	processed_pseudogene	Gm8668	ENSMUST00000120559	processed_pseudogene		15	1	37421248	1447
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000172768	protein_coding		4	-1	59548775	2147
ENSMUSG00000076632	IG_D_gene	Gm16968	ENSMUST00000103441	IG_D_gene	principal1	12	-1	113528054	23
ENSMUSG00000027403	protein_coding	Tgm6	ENSMUST00000140947	processed_transcript		2	1	130112416	3308
ENSMUSG00000027668	protein_coding	Mfn1	ENSMUST00000091257	protein_coding	principal1	3	1	32529465	4562
ENSMUSG00000002679	protein_coding	Med6	ENSMUST00000161211	protein_coding	principal1	12	-1	81595006	1059
ENSMUSG00000074994	protein_coding	Qser1	ENSMUST00000231375	protein_coding	alternative2	2	-1	104816760	9037
ENSMUSG00000115095	TEC	Gm49311	ENSMUST00000228636	TEC		15	-1	37561830	2805
ENSMUSG00000007279	protein_coding	Scube2	ENSMUST00000106728	protein_coding		7	-1	109865643	2890
ENSMUSG00000026179	protein_coding	Pnkd	ENSMUST00000087225	protein_coding		1	1	74332610	2859
ENSMUSG00000038891	protein_coding	Prl3b1	ENSMUST00000035273	protein_coding	principal1	13	1	27242430	879
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000164710	protein_coding		7	1	128246812	3788
ENSMUSG00000074994	protein_coding	Qser1	ENSMUST00000238887	nonsense_mediated_decay		2	-1	104816760	9191
ENSMUSG00000080785	processed_pseudogene	Gm11591	ENSMUST00000120063	processed_pseudogene		1	-1	61197242	702
ENSMUSG00000029208	protein_coding	Guf1	ENSMUST00000154728	nonsense_mediated_decay		5	1	69556923	3091
ENSMUSG00000046367	protein_coding	Mgat4e	ENSMUST00000172898	protein_coding	principal1	1	-1	134549682	1735
ENSMUSG00000086313	sense_intronic	Gm15940	ENSMUST00000156011	sense_intronic		15	-1	37765401	817
ENSMUSG00000002679	protein_coding	Med6	ENSMUST00000161598	protein_coding		12	-1	81594963	897
ENSMUSG00000100893	lincRNA	Gm28083	ENSMUST00000186533	lincRNA		1	-1	61271514	538
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000148331	protein_coding		4	-1	59549314	2016
ENSMUSG00000026179	protein_coding	Pnkd	ENSMUST00000190398	retained_intron		1	1	74332663	3599
ENSMUSG00000020182	protein_coding	Ddc	ENSMUST00000066237	protein_coding	principal1	11	-1	11898044	1922
ENSMUSG00000027035	protein_coding	Cers6	ENSMUST00000175684	retained_intron		2	1	68861450	1134
ENSMUSG00000107026	processed_pseudogene	Gm7504	ENSMUST00000201449	processed_pseudogene		6	1	38284526	424
ENSMUSG00000027668	protein_coding	Mfn1	ENSMUST00000125182	retained_intron		3	1	32529531	1176
ENSMUSG00000027035	protein_coding	Cers6	ENSMUST00000141983	retained_intron		2	1	68861470	673
ENSMUSG00000074994	protein_coding	Qser1	ENSMUST00000117237	protein_coding	principal2	2	-1	104816696	8973
ENSMUSG00000084405	unprocessed_pseudogene	Olfr1169-ps1	ENSMUST00000121437	unprocessed_pseudogene		2	1	88197464	233
ENSMUSG00000020182	protein_coding	Ddc	ENSMUST00000155690	protein_coding		11	-1	11890369	799
ENSMUSG00000027668	protein_coding	Mfn1	ENSMUST00000147350	protein_coding		3	1	32529539	746
ENSMUSG00000035437	protein_coding	Rabgap1	ENSMUST00000066055	protein_coding		2	1	37452245	4247
ENSMUSG00000046367	protein_coding	Mgat4e	ENSMUST00000185836	nonsense_mediated_decay		1	-1	134546950	1375
ENSMUSG00000027035	protein_coding	Cers6	ENSMUST00000176018	protein_coding	alternative1	2	1	68861586	1279
ENSMUSG00000002679	protein_coding	Med6	ENSMUST00000160739	retained_intron		12	-1	81574746	487
ENSMUSG00000027668	protein_coding	Mfn1	ENSMUST00000137565	protein_coding		3	1	32531545	616
ENSMUSG00000024413	protein_coding	Npc1	ENSMUST00000025279	protein_coding	principal1	18	-1	12236400	5224
ENSMUSG00000029208	protein_coding	Guf1	ENSMUST00000125543	retained_intron		5	1	69556953	2611
ENSMUSG00000046367	protein_coding	Mgat4e	ENSMUST00000052911	protein_coding	principal1	1	-1	134547022	1360
ENSMUSG00000027035	protein_coding	Cers6	ENSMUST00000155748	retained_intron		2	1	68947260	400
ENSMUSG00000043945	protein_coding	Adam6a	ENSMUST00000053086	protein_coding	principal1	12	1	113543908	2558
ENSMUSG00000027668	protein_coding	Mfn1	ENSMUST00000118286	protein_coding	principal1	3	1	32531554	2789
ENSMUSG00000075133	protein_coding	Olfr1170	ENSMUST00000214386	protein_coding	principal1	2	-1	88228334	3355
ENSMUSG00000022288	protein_coding	4930447A16Rik	ENSMUST00000022897	protein_coding	principal1	15	1	37425554	587
ENSMUSG00000027035	protein_coding	Cers6	ENSMUST00000141498	retained_intron		2	1	68959911	762
ENSMUSG00000020182	protein_coding	Ddc	ENSMUST00000134401	processed_transcript		11	-1	11836280	661
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000173268	retained_intron		4	-1	59485772	669
ENSMUSG00000029208	protein_coding	Guf1	ENSMUST00000132169	nonsense_mediated_decay		5	1	69556953	1752
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000167036	protein_coding		13	-1	34994132	869
ENSMUSG00000007279	protein_coding	Scube2	ENSMUST00000132113	processed_transcript		7	-1	109840927	2473
ENSMUSG00000075133	protein_coding	Olfr1170	ENSMUST00000099831	protein_coding	principal1	2	-1	88225030	951
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000070656	protein_coding	alternative2	7	1	128246871	3026
ENSMUSG00000103233	TEC	Gm37159	ENSMUST00000192720	TEC		2	1	68891366	3605
ENSMUSG00000002679	protein_coding	Med6	ENSMUST00000161902	protein_coding		12	-1	81593949	596
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000172471	protein_coding		4	-1	59493285	566
ENSMUSG00000007279	protein_coding	Scube2	ENSMUST00000138946	processed_transcript		7	-1	109808231	676
ENSMUSG00000103734	TEC	Gm37651	ENSMUST00000194679	TEC		2	1	68962217	1494
ENSMUSG00000020182	protein_coding	Ddc	ENSMUST00000122971	processed_transcript		11	-1	11864907	699
ENSMUSG00000082010	transcribed_unprocessed_pseudogene	Olfr1171-ps1	ENSMUST00000150178	processed_transcript		2	-1	88258690	1398
ENSMUSG00000027668	protein_coding	Mfn1	ENSMUST00000140328	retained_intron		3	1	32546495	668
ENSMUSG00000087598	protein_coding	Zfp111	ENSMUST00000086006	protein_coding	principal3	7	-1	24208149	6402
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000171258	protein_coding		13	-1	34994122	956
ENSMUSG00000103747	TEC	Gm38236	ENSMUST00000192661	TEC		2	1	68906003	3229
ENSMUSG00000115157	processed_transcript	Gm49397	ENSMUST00000145909	processed_transcript		15	-1	37734335	586
ENSMUSG00000085248	lincRNA	Gm11587	ENSMUST00000128274	lincRNA		1	1	61301909	1120
ENSMUSG00000082010	transcribed_unprocessed_pseudogene	Olfr1171-ps1	ENSMUST00000118079	transcribed_unprocessed_pseudogene		2	-1	88253795	837
ENSMUSG00000002679	protein_coding	Med6	ENSMUST00000159187	retained_intron		12	-1	81595008	636
ENSMUSG00000101671	antisense	Gm28221	ENSMUST00000185617	antisense		15	1	37367205	347
ENSMUSG00000082237	unprocessed_pseudogene	Olfr1172-ps1	ENSMUST00000121530	unprocessed_pseudogene		2	-1	88264364	192
ENSMUSG00000027668	protein_coding	Mfn1	ENSMUST00000194384	retained_intron		3	1	32554066	588
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000169759	protein_coding		13	-1	34993462	646
ENSMUSG00000087598	protein_coding	Zfp111	ENSMUST00000056683	protein_coding	alternative2	7	-1	24203583	3380
ENSMUSG00000112135	processed_pseudogene	Gm9029	ENSMUST00000219232	processed_pseudogene		10	-1	118246209	2410
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000174748	nonsense_mediated_decay		4	-1	59549252	1286
ENSMUSG00000027668	protein_coding	Mfn1	ENSMUST00000151320	protein_coding		3	1	32561546	1602
ENSMUSG00000002679	protein_coding	Med6	ENSMUST00000002756	protein_coding		12	-1	81594958	1003
ENSMUSG00000087598	protein_coding	Zfp111	ENSMUST00000160563	processed_transcript		7	-1	24208071	586
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000220713	processed_transcript		13	-1	35027096	2874
ENSMUSG00000103798	processed_pseudogene	Gm2229	ENSMUST00000193328	processed_pseudogene		3	-1	47460338	710
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000134879	nonsense_mediated_decay		4	-1	59549257	558
ENSMUSG00000027668	protein_coding	Mfn1	ENSMUST00000191661	retained_intron		3	1	32562908	344
ENSMUSG00000112614	processed_pseudogene	Gm9030	ENSMUST00000218405	processed_pseudogene		10	1	118253259	2410
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000173884	protein_coding		4	-1	59549265	550
ENSMUSG00000075132	protein_coding	Olfr1173	ENSMUST00000099830	protein_coding	principal1	2	-1	88279875	2268
ENSMUSG00000087598	protein_coding	Zfp111	ENSMUST00000148050	retained_intron		7	-1	24208127	2895
ENSMUSG00000027668	protein_coding	Mfn1	ENSMUST00000195334	retained_intron		3	1	32574218	246
ENSMUSG00000020182	protein_coding	Ddc	ENSMUST00000134121	processed_transcript		11	-1	11890398	701
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000151313	retained_intron		4	-1	59514348	447
ENSMUSG00000087598	protein_coding	Zfp111	ENSMUST00000142218	processed_transcript		7	-1	24211443	1657
ENSMUSG00000021417	protein_coding	Eci2	ENSMUST00000178421	protein_coding	principal3	13	-1	34994144	1414
ENSMUSG00000087598	protein_coding	Zfp111	ENSMUST00000073833	protein_coding	principal3	7	-1	24211443	3079
ENSMUSG00000030717	protein_coding	Nupr1	ENSMUST00000032961	protein_coding	principal1	7	-1	126625676	829
ENSMUSG00000028382	protein_coding	Ptbp3	ENSMUST00000140925	protein_coding		4	-1	59548737	606
ENSMUSG00000075132	protein_coding	Olfr1173	ENSMUST00000216887	protein_coding	principal1	2	-1	88278402	5363
ENSMUSG00000020182	protein_coding	Ddc	ENSMUST00000145033	processed_transcript		11	-1	11880629	741
ENSMUSG00000080831	processed_pseudogene	Gm12529	ENSMUST00000119529	processed_pseudogene		4	1	59532747	268
ENSMUSG00000084989	protein_coding	Crocc2	ENSMUST00000138595	protein_coding	principal1	1	1	93168725	7132
ENSMUSG00000057890	protein_coding	Olfr1375	ENSMUST00000073543	protein_coding	principal1	11	1	51048109	942
ENSMUSG00000002486	protein_coding	Tchp	ENSMUST00000094441	protein_coding	principal1	5	1	114707760	2882
ENSMUSG00000024413	protein_coding	Npc1	ENSMUST00000235105	retained_intron		18	-1	12194270	715
ENSMUSG00000080713	protein_coding	Olfr1174	ENSMUST00000214955	processed_transcript		2	-1	88314689	1534
ENSMUSG00000030717	protein_coding	Nupr1	ENSMUST00000131174	retained_intron		7	-1	126627010	2449
ENSMUSG00000112252	protein_coding	Gm32802	ENSMUST00000219565	protein_coding	principal1	10	1	118258688	2409
ENSMUSG00000024413	protein_coding	Npc1	ENSMUST00000145771	processed_transcript		18	-1	12212554	837
ENSMUSG00000020182	protein_coding	Ddc	ENSMUST00000136810	processed_transcript		11	-1	11822921	964
ENSMUSG00000080713	protein_coding	Olfr1174	ENSMUST00000213348	protein_coding	principal1	2	-1	88315135	1738
ENSMUSG00000011877	protein_coding	Git1	ENSMUST00000037285	protein_coding	principal2	11	1	77493562	3512
ENSMUSG00000035031	protein_coding	C8a	ENSMUST00000152146	processed_transcript		4	-1	104856523	749
ENSMUSG00000112561	processed_pseudogene	Gm9035	ENSMUST00000218318	processed_pseudogene		10	1	118265937	1697
ENSMUSG00000030717	protein_coding	Nupr1	ENSMUST00000191192	nonsense_mediated_decay		7	-1	126625344	570
ENSMUSG00000024413	protein_coding	Npc1	ENSMUST00000133112	retained_intron		18	-1	12236358	5756
ENSMUSG00000059159	processed_pseudogene	Gm8129	ENSMUST00000118230	processed_pseudogene		6	-1	52346942	213
ENSMUSG00000084282	processed_pseudogene	Gm15054	ENSMUST00000117393	processed_pseudogene		6	-1	52357824	281
ENSMUSG00000024413	protein_coding	Npc1	ENSMUST00000149211	retained_intron		18	-1	12236326	4188
ENSMUSG00000011877	protein_coding	Git1	ENSMUST00000100812	protein_coding	alternative2	11	1	77493571	3476
ENSMUSG00000020182	protein_coding	Ddc	ENSMUST00000146359	processed_transcript		11	-1	11890401	1439
ENSMUSG00000030717	protein_coding	Nupr1	ENSMUST00000187609	nonsense_mediated_decay		7	-1	126625475	587
ENSMUSG00000024413	protein_coding	Npc1	ENSMUST00000144435	processed_transcript		18	-1	12224087	352
ENSMUSG00000107895	lincRNA	1700094M24Rik	ENSMUST00000203771	lincRNA		6	1	52492451	665
ENSMUSG00000020182	protein_coding	Ddc	ENSMUST00000109659	protein_coding	principal1	11	-1	11890408	1954
ENSMUSG00000002486	protein_coding	Tchp	ENSMUST00000152999	processed_transcript		5	1	114707819	640
ENSMUSG00000035765	protein_coding	Dym	ENSMUST00000039608	protein_coding	principal1	18	1	75018785	2456
ENSMUSG00000020182	protein_coding	Ddc	ENSMUST00000178704	protein_coding	principal1	11	-1	11898144	2018
ENSMUSG00000108062	lincRNA	Gm44028	ENSMUST00000205205	lincRNA		6	1	52509889	355
ENSMUSG00000100238	lincRNA	Gm21450	ENSMUST00000187408	lincRNA		Y	-1	59796959	174
ENSMUSG00000011877	protein_coding	Git1	ENSMUST00000152428	retained_intron		11	1	77499091	708
ENSMUSG00000030717	protein_coding	Nupr1	ENSMUST00000151105	processed_transcript		7	-1	126626016	524
ENSMUSG00000087312	lincRNA	Gm13833	ENSMUST00000146766	lincRNA		6	1	31102846	719
ENSMUSG00000035765	protein_coding	Dym	ENSMUST00000235692	protein_coding		18	1	75018796	3007
ENSMUSG00000030717	protein_coding	Nupr1	ENSMUST00000191413	processed_transcript		7	-1	126630861	315
ENSMUSG00000000805	protein_coding	Car4	ENSMUST00000139416	retained_intron		11	1	84957786	435
ENSMUSG00000104030	TEC	5330406M23Rik	ENSMUST00000195672	TEC		6	-1	31110920	2094
ENSMUSG00000086391	antisense	1700042O10Rik	ENSMUST00000151032	antisense		11	1	11868123	1075
ENSMUSG00000118238	processed_pseudogene	Gm34432	ENSMUST00000235913	processed_pseudogene		19	-1	25347203	790
ENSMUSG00000086922	processed_pseudogene	Gm13835	ENSMUST00000118459	processed_pseudogene		6	-1	31142663	685
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000230091	lincRNA		6	-1	31087610	1178
ENSMUSG00000057464	protein_coding	Olfr1415	ENSMUST00000204009	protein_coding	principal1	1	-1	92496101	2815
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000229076	lincRNA		6	-1	31088471	1632
ENSMUSG00000011877	protein_coding	Git1	ENSMUST00000127302	retained_intron		11	1	77500988	1330
ENSMUSG00000091163	transcribed_unprocessed_pseudogene	Gm3962	ENSMUST00000173027	transcribed_unprocessed_pseudogene		7	-1	8754923	2587
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000229711	lincRNA		6	-1	31166516	1447
ENSMUSG00000035765	protein_coding	Dym	ENSMUST00000235545	processed_transcript		18	1	75047324	515
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000229299	lincRNA		6	-1	31087604	260
ENSMUSG00000091163	transcribed_unprocessed_pseudogene	Gm3962	ENSMUST00000209798	processed_transcript		7	-1	8747946	577
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000229116	lincRNA		6	-1	31088212	961
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000230832	lincRNA		6	-1	31166516	650
ENSMUSG00000011877	protein_coding	Git1	ENSMUST00000139410	retained_intron		11	1	77502479	1105
ENSMUSG00000057464	protein_coding	Olfr1415	ENSMUST00000204766	protein_coding		1	-1	92496078	403
ENSMUSG00000091163	transcribed_unprocessed_pseudogene	Gm3962	ENSMUST00000211257	processed_transcript		7	-1	8749759	648
ENSMUSG00000057464	protein_coding	Olfr1415	ENSMUST00000071521	protein_coding	principal1	1	-1	92491753	936
ENSMUSG00000035765	protein_coding	Dym	ENSMUST00000235554	retained_intron		18	1	75114658	4307
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000123757	lincRNA		6	-1	31087912	137
ENSMUSG00000011877	protein_coding	Git1	ENSMUST00000128796	retained_intron		11	1	77505136	580
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000187876	lincRNA		6	-1	31218474	656
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000230874	lincRNA		6	-1	31166516	655
ENSMUSG00000027403	protein_coding	Tgm6	ENSMUST00000028888	protein_coding	principal1	2	1	130123275	3327
ENSMUSG00000047749	protein_coding	Zc3hav1l	ENSMUST00000058524	protein_coding	principal1	6	-1	38299259	6536
ENSMUSG00000101103	unprocessed_pseudogene	Gm21843	ENSMUST00000190137	unprocessed_pseudogene		Y	1	59831762	694
ENSMUSG00000035765	protein_coding	Dym	ENSMUST00000236840	processed_transcript		18	1	75125425	556
ENSMUSG00000117306	processed_pseudogene	Gm8945	ENSMUST00000233718	processed_pseudogene		6	-1	23156620	685
ENSMUSG00000117729	processed_pseudogene	Gm5242	ENSMUST00000237684	processed_pseudogene		19	-1	5132972	1233
ENSMUSG00000072950	unprocessed_pseudogene	Gm10444	ENSMUST00000126708	unprocessed_pseudogene		6	1	85140505	148
ENSMUSG00000027403	protein_coding	Tgm6	ENSMUST00000147616	processed_transcript		2	1	130123275	2965
ENSMUSG00000107922	processed_pseudogene	Gm44285	ENSMUST00000203557	processed_pseudogene		6	-1	85146385	940
ENSMUSG00000000318	protein_coding	Clec10a	ENSMUST00000102571	protein_coding	principal3	11	1	70166623	1496
ENSMUSG00000108361	processed_transcript	Gm44796	ENSMUST00000205272	processed_transcript		7	1	24213134	626
ENSMUSG00000106989	processed_pseudogene	Gm5989	ENSMUST00000096092	processed_pseudogene		6	-1	23160061	2077
ENSMUSG00000002486	protein_coding	Tchp	ENSMUST00000124242	retained_intron		5	1	114707864	3138
ENSMUSG00000042849	protein_coding	Olfr1414	ENSMUST00000062353	protein_coding	principal1	1	-1	92518661	6017
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000231007	lincRNA		6	-1	31218222	1415
ENSMUSG00000002486	protein_coding	Tchp	ENSMUST00000202105	retained_intron		5	1	114711066	2833
ENSMUSG00000035437	protein_coding	Rabgap1	ENSMUST00000112920	protein_coding	principal1	2	1	37452267	4847
ENSMUSG00000112920	protein_coding	Spata22	ENSMUST00000092926	protein_coding	principal1	11	1	73329741	1274
ENSMUSG00000092523	unprocessed_pseudogene	Gm18191	ENSMUST00000174624	unprocessed_pseudogene		7	-1	8777247	824
ENSMUSG00000002486	protein_coding	Tchp	ENSMUST00000131679	protein_coding		5	1	114714635	644
ENSMUSG00000035437	protein_coding	Rabgap1	ENSMUST00000205186	retained_intron		2	1	37490865	3082
ENSMUSG00000040247	protein_coding	Tbc1d10c	ENSMUST00000236780	nonsense_mediated_decay		19	-1	4190928	2699
ENSMUSG00000034473	protein_coding	Sec22a	ENSMUST00000043521	protein_coding	principal1	16	-1	35363918	3992
ENSMUSG00000042849	protein_coding	Olfr1414	ENSMUST00000189174	protein_coding	principal1	1	-1	92518419	1159
ENSMUSG00000035437	protein_coding	Rabgap1	ENSMUST00000130601	processed_transcript		2	1	37491931	629
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000112098	protein_coding	principal2	14	1	31019138	6566
ENSMUSG00000000318	protein_coding	Clec10a	ENSMUST00000178945	protein_coding		11	1	70166655	2332
ENSMUSG00000002486	protein_coding	Tchp	ENSMUST00000112199	processed_transcript		5	1	114714961	2156
ENSMUSG00000034473	protein_coding	Sec22a	ENSMUST00000154064	nonsense_mediated_decay		16	-1	35361761	850
ENSMUSG00000034473	protein_coding	Sec22a	ENSMUST00000232420	protein_coding		16	-1	35361761	900
ENSMUSG00000002486	protein_coding	Tchp	ENSMUST00000128625	retained_intron		5	1	114717560	391
ENSMUSG00000069825	protein_coding	Gm49340	ENSMUST00000117445	protein_coding	principal1	11	1	73329741	3200
ENSMUSG00000002486	protein_coding	Tchp	ENSMUST00000202252	retained_intron		5	1	114719684	1475
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000115107	lincRNA		6	-1	31218433	1676
ENSMUSG00000107340	antisense	Gm42789	ENSMUST00000202276	antisense		5	-1	114716120	567
ENSMUSG00000116673	protein_coding	A630089N07Rik	ENSMUST00000232346	protein_coding		16	-1	98081992	804
ENSMUSG00000116673	protein_coding	A630089N07Rik	ENSMUST00000232376	protein_coding		16	-1	98081957	524
ENSMUSG00000034473	protein_coding	Sec22a	ENSMUST00000154216	retained_intron		16	-1	35363815	625
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000185982	lincRNA		6	-1	31218420	1157
ENSMUSG00000000318	protein_coding	Clec10a	ENSMUST00000000327	protein_coding	alternative2	11	1	70166667	1454
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000188611	lincRNA		6	-1	31218346	516
ENSMUSG00000035437	protein_coding	Rabgap1	ENSMUST00000159092	processed_transcript		2	1	37516519	1763
ENSMUSG00000091528	protein_coding	Vmn2r126	ENSMUST00000173815	protein_coding	principal2	7	1	43018765	2598
ENSMUSG00000034473	protein_coding	Sec22a	ENSMUST00000138355	retained_intron		16	-1	35363852	1116
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000231083	lincRNA		6	-1	31216366	431
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000112095	protein_coding		14	1	31019138	7907
ENSMUSG00000034473	protein_coding	Sec22a	ENSMUST00000141087	processed_transcript		16	-1	35363847	560
ENSMUSG00000068798	protein_coding	Rap1a	ENSMUST00000090678	protein_coding	principal1	3	-1	105801336	2407
ENSMUSG00000116673	protein_coding	A630089N07Rik	ENSMUST00000232533	protein_coding	principal5	16	-1	98081967	654
ENSMUSG00000035437	protein_coding	Rabgap1	ENSMUST00000061179	protein_coding	principal1	2	1	37443285	4967
ENSMUSG00000000318	protein_coding	Clec10a	ENSMUST00000178567	protein_coding		11	1	70166731	337
ENSMUSG00000116624	TEC	Gm49706	ENSMUST00000232375	TEC		16	-1	35323066	2355
ENSMUSG00000000318	protein_coding	Clec10a	ENSMUST00000152635	protein_coding		11	1	70167695	335
ENSMUSG00000091528	protein_coding	Vmn2r126	ENSMUST00000166914	protein_coding	alternative2	7	1	43018798	2586
ENSMUSG00000062128	protein_coding	Olfr20	ENSMUST00000120137	protein_coding	principal1	11	1	73350783	2390
ENSMUSG00000083745	processed_pseudogene	Gm13543	ENSMUST00000121230	processed_pseudogene		2	1	37672208	796
ENSMUSG00000116673	protein_coding	A630089N07Rik	ENSMUST00000232614	processed_transcript		16	-1	98082010	497
ENSMUSG00000108666	processed_pseudogene	Gm44538	ENSMUST00000205615	processed_pseudogene		7	-1	43061013	348
ENSMUSG00000068798	protein_coding	Rap1a	ENSMUST00000199969	nonsense_mediated_decay		3	-1	105750328	1377
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000230209	lincRNA		6	-1	31220488	1490
ENSMUSG00000116673	protein_coding	A630089N07Rik	ENSMUST00000231268	protein_coding	alternative2	16	-1	98082450	2142
ENSMUSG00000062128	protein_coding	Olfr20	ENSMUST00000108465	protein_coding	principal1	11	1	73353735	1061
ENSMUSG00000116673	protein_coding	A630089N07Rik	ENSMUST00000231741	protein_coding		16	-1	98082450	1556
ENSMUSG00000108492	processed_pseudogene	Rpl18a-ps4	ENSMUST00000206176	processed_pseudogene		7	-1	43082658	536
ENSMUSG00000068798	protein_coding	Rap1a	ENSMUST00000197094	protein_coding		3	-1	105801285	782
ENSMUSG00000079215	protein_coding	Zfp664	ENSMUST00000111417	protein_coding	principal1	5	1	124862691	4092
ENSMUSG00000000318	protein_coding	Clec10a	ENSMUST00000150966	processed_transcript		11	1	70167874	565
ENSMUSG00000044471	lincRNA	Lncpint	ENSMUST00000229779	lincRNA		6	-1	31220224	683
ENSMUSG00000068798	protein_coding	Rap1a	ENSMUST00000198004	protein_coding		3	-1	105801310	511
ENSMUSG00000107181	lincRNA	Gm17768	ENSMUST00000201257	lincRNA		7	1	43078051	378
ENSMUSG00000106867	TEC	Gm43800	ENSMUST00000201868	TEC		6	1	31288963	2731
ENSMUSG00000097874	antisense	C030010L15Rik	ENSMUST00000181465	antisense		16	-1	97997419	720
ENSMUSG00000063457	protein_coding	Rps15	ENSMUST00000068408	protein_coding	principal1	10	1	80292453	500
ENSMUSG00000035863	protein_coding	Palm	ENSMUST00000046945	protein_coding	principal1	10	1	79793572	2651
ENSMUSG00000045551	protein_coding	Fpr1	ENSMUST00000061516	protein_coding	principal1	17	-1	17883940	1324
ENSMUSG00000087004	antisense	Gm14154	ENSMUST00000142642	antisense		2	-1	151950641	579
ENSMUSG00000079215	protein_coding	Zfp664	ENSMUST00000141533	processed_transcript		5	1	124862764	1771
ENSMUSG00000027858	protein_coding	Tspan2	ENSMUST00000029451	protein_coding	principal1	3	1	102734529	4484
ENSMUSG00000032702	protein_coding	Kank1	ENSMUST00000049400	protein_coding	principal1	19	1	25236975	5637
ENSMUSG00000079215	protein_coding	Zfp664	ENSMUST00000130616	processed_transcript		5	1	124863039	600
ENSMUSG00000000318	protein_coding	Clec10a	ENSMUST00000143298	retained_intron		11	1	70169053	441
ENSMUSG00000035863	protein_coding	Palm	ENSMUST00000105379	protein_coding		10	1	79793572	2519
ENSMUSG00000068303	transcribed_unprocessed_pseudogene	Spr-ps1	ENSMUST00000187705	processed_transcript		6	1	85152621	2892
ENSMUSG00000079215	protein_coding	Zfp664	ENSMUST00000199154	processed_transcript		5	1	124874152	2146
ENSMUSG00000068303	transcribed_unprocessed_pseudogene	Spr-ps1	ENSMUST00000089584	transcribed_unprocessed_pseudogene		6	1	85155005	605
ENSMUSG00000097874	antisense	C030010L15Rik	ENSMUST00000183627	antisense		16	-1	97996968	524
ENSMUSG00000000318	protein_coding	Clec10a	ENSMUST00000180106	retained_intron		11	1	70169310	413
ENSMUSG00000032702	protein_coding	Kank1	ENSMUST00000137260	processed_transcript		19	1	25395303	756
ENSMUSG00000063457	protein_coding	Rps15	ENSMUST00000062674	protein_coding		10	1	80292645	572
ENSMUSG00000027858	protein_coding	Tspan2	ENSMUST00000196611	protein_coding		3	1	102734957	682
ENSMUSG00000079215	protein_coding	Zfp664	ENSMUST00000134463	processed_transcript		5	1	124875970	404
ENSMUSG00000000318	protein_coding	Clec10a	ENSMUST00000153959	protein_coding		11	1	70169485	679
ENSMUSG00000080717	protein_coding	B230307C23Rik	ENSMUST00000231936	protein_coding	alternative2	16	1	97997315	672
ENSMUSG00000068303	transcribed_unprocessed_pseudogene	Spr-ps1	ENSMUST00000186281	processed_transcript		6	1	85155208	706
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000112106	protein_coding		14	1	31019149	485
ENSMUSG00000035863	protein_coding	Palm	ENSMUST00000218631	protein_coding		10	1	79793667	2725
ENSMUSG00000032702	protein_coding	Kank1	ENSMUST00000146647	protein_coding		19	1	25406699	3655
ENSMUSG00000080717	protein_coding	B230307C23Rik	ENSMUST00000122450	protein_coding	alternative2	16	1	97997323	1298
ENSMUSG00000079215	protein_coding	Zfp664	ENSMUST00000134473	processed_transcript		5	1	124884569	3884
ENSMUSG00000027858	protein_coding	Tspan2	ENSMUST00000119902	protein_coding		3	1	102735215	961
ENSMUSG00000071952	TEC	Gm10351	ENSMUST00000087694	TEC		7	1	43099719	125
ENSMUSG00000096468	protein_coding	Gm16405	ENSMUST00000180150	protein_coding	principal1	X	1	54531208	703
ENSMUSG00000032702	protein_coding	Kank1	ENSMUST00000155788	retained_intron		19	1	25422239	583
ENSMUSG00000080717	protein_coding	B230307C23Rik	ENSMUST00000232278	protein_coding		16	1	97997324	403
ENSMUSG00000027858	protein_coding	Tspan2	ENSMUST00000197345	protein_coding		3	1	102759310	425
ENSMUSG00000080717	protein_coding	B230307C23Rik	ENSMUST00000232387	protein_coding	alternative2	16	1	97997327	546
ENSMUSG00000096468	protein_coding	Gm16405	ENSMUST00000169247	protein_coding	principal1	X	1	54532797	468
ENSMUSG00000027857	protein_coding	Tshb	ENSMUST00000196958	retained_intron		3	-1	102779860	4396
ENSMUSG00000080717	protein_coding	B230307C23Rik	ENSMUST00000232308	protein_coding	principal5	16	1	97997334	669
ENSMUSG00000080717	protein_coding	B230307C23Rik	ENSMUST00000183578	retained_intron		16	1	97997347	2449
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000182283	protein_coding	principal3	1	-1	138175306	4702
ENSMUSG00000080717	protein_coding	B230307C23Rik	ENSMUST00000231913	protein_coding	alternative2	16	1	97997364	1230
ENSMUSG00000040359	protein_coding	Ufl1	ENSMUST00000102994	protein_coding	principal1	4	-1	25281821	4316
ENSMUSG00000035863	protein_coding	Palm	ENSMUST00000217759	processed_transcript		10	1	79806018	453
ENSMUSG00000079700	protein_coding	Fpr3	ENSMUST00000054871	protein_coding	principal1	17	1	17887852	1268
ENSMUSG00000080717	protein_coding	B230307C23Rik	ENSMUST00000113729	protein_coding		16	1	98008629	192
ENSMUSG00000029208	protein_coding	Guf1	ENSMUST00000087228	protein_coding	principal1	5	1	69556961	3433
ENSMUSG00000064194	protein_coding	Zfp936	ENSMUST00000205912	protein_coding		7	1	43114229	595
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000146325	protein_coding		14	1	31019157	3137
ENSMUSG00000079700	protein_coding	Fpr3	ENSMUST00000115565	protein_coding	principal1	17	1	17970458	1220
ENSMUSG00000035863	protein_coding	Palm	ENSMUST00000218924	processed_transcript		10	1	79806026	436
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000112094	protein_coding		14	1	31019170	5154
ENSMUSG00000040359	protein_coding	Ufl1	ENSMUST00000038705	protein_coding		4	-1	25281763	2687
ENSMUSG00000104835	lincRNA	Gm5547	ENSMUST00000200182	lincRNA		3	1	105815540	683
ENSMUSG00000029208	protein_coding	Guf1	ENSMUST00000031113	protein_coding		5	1	69556988	1769
ENSMUSG00000064194	protein_coding	Zfp936	ENSMUST00000202535	protein_coding	principal1	7	1	43177588	3112
ENSMUSG00000035863	protein_coding	Palm	ENSMUST00000219711	processed_transcript		10	1	79806681	1027
ENSMUSG00000104835	lincRNA	Gm5547	ENSMUST00000198306	lincRNA		3	1	105815567	449
ENSMUSG00000052270	protein_coding	Fpr2	ENSMUST00000149944	protein_coding		17	1	17887824	883
ENSMUSG00000040359	protein_coding	Ufl1	ENSMUST00000132558	processed_transcript		4	-1	25281748	628
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000144009	protein_coding		14	1	31019177	434
ENSMUSG00000104835	lincRNA	Gm5547	ENSMUST00000196002	lincRNA		3	1	105816613	489
ENSMUSG00000064194	protein_coding	Zfp936	ENSMUST00000200973	protein_coding		7	1	43177623	578
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000145497	processed_transcript		14	1	31019199	871
ENSMUSG00000029208	protein_coding	Guf1	ENSMUST00000144363	nonsense_mediated_decay		5	1	69557073	1776
ENSMUSG00000064194	protein_coding	Zfp936	ENSMUST00000072829	protein_coding		7	1	43187170	1368
ENSMUSG00000029208	protein_coding	Guf1	ENSMUST00000173205	protein_coding		5	1	69557094	1827
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000052239	protein_coding		14	1	31019208	5065
ENSMUSG00000052270	protein_coding	Fpr2	ENSMUST00000064068	protein_coding	principal1	17	1	17887888	1133
ENSMUSG00000029208	protein_coding	Guf1	ENSMUST00000125660	retained_intron		5	1	69566724	6321
ENSMUSG00000029208	protein_coding	Guf1	ENSMUST00000202180	retained_intron		5	1	69570191	1293
ENSMUSG00000035863	protein_coding	Palm	ENSMUST00000218857	protein_coding		10	1	79814662	597
ENSMUSG00000116963	processed_pseudogene	Gm5966	ENSMUST00000232146	processed_pseudogene		17	1	17920269	1044
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000156628	protein_coding		14	1	31025507	4388
ENSMUSG00000116661	unprocessed_pseudogene	Gm5966	ENSMUST00000232161	unprocessed_pseudogene		17	1	17920269	1033
ENSMUSG00000116634	processed_pseudogene	Gm7531	ENSMUST00000231820	processed_pseudogene		17	-1	17907275	727
ENSMUSG00000094714	protein_coding	Gm16430	ENSMUST00000178145	protein_coding	principal1	X	1	54622211	703
ENSMUSG00000090957	processed_pseudogene	Gm7535	ENSMUST00000164167	processed_pseudogene		17	-1	17912816	1777
ENSMUSG00000101326	transcribed_unprocessed_pseudogene	Gm28835	ENSMUST00000188415	processed_transcript		Y	-1	62569053	655
ENSMUSG00000020364	protein_coding	Zfp354a	ENSMUST00000102766	protein_coding	principal3	11	1	51059257	2592
ENSMUSG00000000805	protein_coding	Car4	ENSMUST00000103194	protein_coding	principal1	11	1	84957788	1256
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000169919	nonsense_mediated_decay		7	1	128246961	1317
ENSMUSG00000035863	protein_coding	Palm	ENSMUST00000220365	protein_coding		10	1	79814670	752
ENSMUSG00000094714	protein_coding	Gm16430	ENSMUST00000169006	protein_coding	principal1	X	1	54623800	615
ENSMUSG00000020364	protein_coding	Zfp354a	ENSMUST00000156914	processed_transcript		11	1	51059259	430
ENSMUSG00000112828	antisense	Gm48495	ENSMUST00000219552	antisense		10	-1	79794656	661
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000167965	protein_coding	principal2	7	1	128246978	1746
ENSMUSG00000035031	protein_coding	C8a	ENSMUST00000106808	protein_coding		4	-1	104876395	3539
ENSMUSG00000101326	transcribed_unprocessed_pseudogene	Gm28835	ENSMUST00000189206	processed_transcript		Y	-1	62569079	543
ENSMUSG00000000805	protein_coding	Car4	ENSMUST00000138331	processed_transcript		11	1	84957811	443
ENSMUSG00000084856	lincRNA	Gm11528	ENSMUST00000156822	lincRNA		11	1	95622660	914
ENSMUSG00000101326	transcribed_unprocessed_pseudogene	Gm28835	ENSMUST00000190062	transcribed_unprocessed_pseudogene		Y	-1	62567549	615
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000183301	protein_coding	alternative2	1	-1	138175267	5074
ENSMUSG00000038301	protein_coding	Snx10	ENSMUST00000049152	protein_coding	principal1	6	1	51523901	2480
ENSMUSG00000116932	unprocessed_pseudogene	Fpr-rs5	ENSMUST00000231588	unprocessed_pseudogene		17	1	17990498	967
ENSMUSG00000094975	unprocessed_pseudogene	Gm14595	ENSMUST00000180335	unprocessed_pseudogene		X	1	54714790	537
ENSMUSG00000020364	protein_coding	Zfp354a	ENSMUST00000109122	protein_coding	alternative2	11	1	51059294	4165
ENSMUSG00000029625	protein_coding	Cpsf4	ENSMUST00000160629	protein_coding	alternative1	5	1	145167213	1713
ENSMUSG00000033726	protein_coding	Emx1	ENSMUST00000045942	protein_coding	principal1	6	1	85187438	1561
ENSMUSG00000020364	protein_coding	Zfp354a	ENSMUST00000109119	protein_coding	alternative2	11	1	51059815	2078
ENSMUSG00000038301	protein_coding	Snx10	ENSMUST00000155724	retained_intron		6	1	51523982	6512
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000182755	protein_coding	alternative2	1	-1	138175300	4611
ENSMUSG00000038301	protein_coding	Snx10	ENSMUST00000140560	protein_coding		6	1	51524260	433
ENSMUSG00000033726	protein_coding	Emx1	ENSMUST00000173919	retained_intron		6	1	85193519	1258
ENSMUSG00000003235	protein_coding	Eif2b5	ENSMUST00000003320	protein_coding	principal1	16	1	20498817	2554
ENSMUSG00000000805	protein_coding	Car4	ENSMUST00000150596	nonsense_mediated_decay		11	1	84957825	692
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000188596	retained_intron		1	-1	138115474	3445
ENSMUSG00000038301	protein_coding	Snx10	ENSMUST00000137212	protein_coding		6	1	51524285	809
ENSMUSG00000048062	protein_coding	Fpr-rs4	ENSMUST00000095651	protein_coding	principal1	17	1	18021733	972
ENSMUSG00000030711	protein_coding	Sult1a1	ENSMUST00000106373	protein_coding	principal1	7	-1	126676432	1289
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000195533	protein_coding		1	-1	138175234	702
ENSMUSG00000029625	protein_coding	Cpsf4	ENSMUST00000070487	protein_coding		5	1	145167224	1606
ENSMUSG00000003235	protein_coding	Eif2b5	ENSMUST00000231315	protein_coding		16	1	20504763	1213
ENSMUSG00000020364	protein_coding	Zfp354a	ENSMUST00000020628	protein_coding	principal3	11	1	51060122	1719
ENSMUSG00000035031	protein_coding	C8a	ENSMUST00000048947	protein_coding	alternative2	4	-1	104876398	1993
ENSMUSG00000000805	protein_coding	Car4	ENSMUST00000127827	nonsense_mediated_decay		11	1	84958104	516
ENSMUSG00000096376	unprocessed_pseudogene	Gm14590	ENSMUST00000118934	unprocessed_pseudogene		X	1	54812464	537
ENSMUSG00000040247	protein_coding	Tbc1d10c	ENSMUST00000235450	protein_coding	principal1	19	-1	4191284	1996
ENSMUSG00000003235	protein_coding	Eif2b5	ENSMUST00000148714	protein_coding		16	1	20506398	821
ENSMUSG00000000805	protein_coding	Car4	ENSMUST00000108076	protein_coding		11	1	84964347	732
ENSMUSG00000117720	processed_pseudogene	Gm5249	ENSMUST00000238117	processed_pseudogene		19	1	25493837	545
ENSMUSG00000102047	transcribed_processed_pseudogene	2010010A06Rik	ENSMUST00000190465	processed_transcript		18	-1	75297317	650
ENSMUSG00000031176	protein_coding	Dynlt3	ENSMUST00000033519	protein_coding	principal1	X	-1	9663003	2176
ENSMUSG00000020914	protein_coding	Top2a	ENSMUST00000068031	protein_coding	principal1	11	-1	99024189	5221
ENSMUSG00000102047	transcribed_processed_pseudogene	2010010A06Rik	ENSMUST00000185628	transcribed_processed_pseudogene		18	-1	75289183	258
ENSMUSG00000040247	protein_coding	Tbc1d10c	ENSMUST00000236890	nonsense_mediated_decay		19	-1	4191284	2154
ENSMUSG00000083855	protein_coding	Olfr1175	ENSMUST00000214207	protein_coding	principal1	2	-1	88327215	5552
ENSMUSG00000030711	protein_coding	Sult1a1	ENSMUST00000106372	protein_coding		7	-1	126676357	1370
ENSMUSG00000040247	protein_coding	Tbc1d10c	ENSMUST00000238094	retained_intron		19	-1	4185532	878
ENSMUSG00000038301	protein_coding	Snx10	ENSMUST00000114439	protein_coding	principal1	6	1	51544524	968
ENSMUSG00000102047	transcribed_processed_pseudogene	2010010A06Rik	ENSMUST00000186356	processed_transcript		18	-1	75297329	694
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000168825	nonsense_mediated_decay		7	1	128246996	1585
ENSMUSG00000085447	lincRNA	9530026F06Rik	ENSMUST00000141000	lincRNA		1	1	61378432	892
ENSMUSG00000040247	protein_coding	Tbc1d10c	ENSMUST00000237206	processed_transcript		19	-1	4187420	993
ENSMUSG00000050023	protein_coding	Olfr1176	ENSMUST00000213778	protein_coding	principal1	2	1	88336721	2823
ENSMUSG00000030711	protein_coding	Sult1a1	ENSMUST00000155419	protein_coding		7	-1	126676375	622
ENSMUSG00000031176	protein_coding	Dynlt3	ENSMUST00000154091	processed_transcript		X	-1	9663003	483
ENSMUSG00000094396	protein_coding	Vmn2r124	ENSMUST00000176802	protein_coding	principal1	17	1	18049424	8140
ENSMUSG00000020914	protein_coding	Top2a	ENSMUST00000154332	processed_transcript		11	-1	98995724	803
ENSMUSG00000029625	protein_coding	Cpsf4	ENSMUST00000160422	protein_coding	alternative1	5	1	145167247	1756
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000136237	nonsense_mediated_decay		14	1	31025507	4971
ENSMUSG00000092569	processed_transcript	Gm20544	ENSMUST00000174338	processed_transcript		18	-1	75367088	690
ENSMUSG00000040247	protein_coding	Tbc1d10c	ENSMUST00000235782	nonsense_mediated_decay		19	-1	4190837	1589
ENSMUSG00000038301	protein_coding	Snx10	ENSMUST00000149024	nonsense_mediated_decay		6	1	51544566	693
ENSMUSG00000094396	protein_coding	Vmn2r124	ENSMUST00000231546	nonsense_mediated_decay		17	1	18049424	8145
ENSMUSG00000040247	protein_coding	Tbc1d10c	ENSMUST00000237495	protein_coding		19	-1	4191047	1316
ENSMUSG00000050023	protein_coding	Olfr1176	ENSMUST00000057439	protein_coding	principal1	2	1	88339566	949
ENSMUSG00000102901	IG_V_pseudogene	Ighv5-1	ENSMUST00000193324	IG_V_pseudogene		12	-1	113573402	353
ENSMUSG00000031176	protein_coding	Dynlt3	ENSMUST00000125030	processed_transcript		X	-1	9659630	360
ENSMUSG00000020914	protein_coding	Top2a	ENSMUST00000139460	processed_transcript		11	-1	98995370	796
ENSMUSG00000035031	protein_coding	C8a	ENSMUST00000064873	protein_coding	principal3	4	-1	104876383	3617
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000022474	protein_coding		14	1	31025510	4843
ENSMUSG00000094396	protein_coding	Vmn2r124	ENSMUST00000233096	retained_intron		17	1	18049424	14813
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000154594	protein_coding		16	1	20668313	668
ENSMUSG00000066175	antisense	2510046G10Rik	ENSMUST00000187458	antisense		7	-1	126649594	1052
ENSMUSG00000094396	protein_coding	Vmn2r124	ENSMUST00000233320	nonsense_mediated_decay		17	1	18049424	7499
ENSMUSG00000066175	antisense	2510046G10Rik	ENSMUST00000084587	antisense		7	-1	126649570	348
ENSMUSG00000031176	protein_coding	Dynlt3	ENSMUST00000140019	processed_transcript		X	-1	9657357	437
ENSMUSG00000027857	protein_coding	Tshb	ENSMUST00000029450	protein_coding	principal1	3	-1	102782674	605
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000112092	protein_coding		14	1	31025510	5009
ENSMUSG00000040247	protein_coding	Tbc1d10c	ENSMUST00000045864	protein_coding		19	-1	4191028	1658
ENSMUSG00000038301	protein_coding	Snx10	ENSMUST00000179365	protein_coding	principal1	6	1	51544523	2464
ENSMUSG00000020914	protein_coding	Top2a	ENSMUST00000151997	processed_transcript		11	-1	99001260	599
ENSMUSG00000086408	lincRNA	Gm11588	ENSMUST00000141758	lincRNA		1	1	61440101	658
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000205654	retained_intron		7	1	128248018	2005
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000187586	retained_intron		1	-1	138120720	3384
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000193650	protein_coding		1	-1	138175300	415
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000123678	nonsense_mediated_decay		14	1	31025510	4759
ENSMUSG00000011751	protein_coding	Sptbn4	ENSMUST00000108362	protein_coding		7	-1	27394506	4861
ENSMUSG00000032870	protein_coding	Smap2	ENSMUST00000043200	protein_coding	principal1	4	-1	121017247	2905
ENSMUSG00000020914	protein_coding	Top2a	ENSMUST00000144318	processed_transcript		11	-1	99006522	970
ENSMUSG00000112918	processed_pseudogene	Gm18120	ENSMUST00000220079	processed_pseudogene		10	1	50758184	511
ENSMUSG00000118531	protein_coding	Tmigd3	ENSMUST00000196748	nonsense_mediated_decay	principal1	3	1	105904483	1181
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000022471	protein_coding		14	1	31025510	5871
ENSMUSG00000112927	TEC	Gm48332	ENSMUST00000217818	TEC		10	1	50696472	370
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000206691	retained_intron		7	1	128248018	2120
ENSMUSG00000020914	protein_coding	Top2a	ENSMUST00000139730	processed_transcript		11	-1	99022210	2849
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000090214	protein_coding	alternative2	14	1	31025511	6212
ENSMUSG00000040247	protein_coding	Tbc1d10c	ENSMUST00000236719	retained_intron		19	-1	4190837	2102
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000183262	retained_intron		1	-1	138175299	1051
ENSMUSG00000027912	protein_coding	Lce1m	ENSMUST00000029520	protein_coding	principal1	3	-1	93019060	874
ENSMUSG00000040247	protein_coding	Tbc1d10c	ENSMUST00000235487	nonsense_mediated_decay		19	-1	4190833	1473
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000135704	protein_coding		14	1	31027478	3256
ENSMUSG00000027857	protein_coding	Tshb	ENSMUST00000170856	protein_coding	principal1	3	-1	102782718	552
ENSMUSG00000011751	protein_coding	Sptbn4	ENSMUST00000108364	protein_coding		7	-1	27396198	4740
ENSMUSG00000032870	protein_coding	Smap2	ENSMUST00000151615	processed_transcript		4	-1	120975708	927
ENSMUSG00000042323	protein_coding	Pbrm1	ENSMUST00000156407	retained_intron		14	1	31084204	817
ENSMUSG00000011751	protein_coding	Sptbn4	ENSMUST00000108363	protein_coding		7	-1	27396553	4724
ENSMUSG00000020914	protein_coding	Top2a	ENSMUST00000129777	processed_transcript		11	-1	99024178	632
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000182138	retained_intron		1	-1	138175296	2655
ENSMUSG00000099653	lincRNA	Gm28984	ENSMUST00000188202	lincRNA		Y	-1	28871711	174
ENSMUSG00000000562	protein_coding	Adora3	ENSMUST00000164730	protein_coding		3	1	105870858	1219
ENSMUSG00000027912	protein_coding	Lce1m	ENSMUST00000193944	protein_coding		3	-1	93019059	251
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000163553	retained_intron		7	1	128248018	1993
ENSMUSG00000027857	protein_coding	Tshb	ENSMUST00000200041	protein_coding	principal1	3	-1	102782674	537
ENSMUSG00000083252	processed_pseudogene	Gm13210	ENSMUST00000121483	processed_pseudogene		2	1	7631076	273
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000183229	retained_intron		1	-1	138175708	364
ENSMUSG00000029625	protein_coding	Cpsf4	ENSMUST00000162244	protein_coding	principal4	5	1	145167254	1387
ENSMUSG00000111446	processed_pseudogene	Gm6581	ENSMUST00000214545	processed_pseudogene		9	1	22092513	260
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000166755	retained_intron		7	1	128248018	1966
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000185570	retained_intron		1	-1	138175189	3213
ENSMUSG00000103257	processed_pseudogene	Gm7977	ENSMUST00000193787	processed_pseudogene		3	-1	48026760	748
ENSMUSG00000025348	protein_coding	Itga7	ENSMUST00000099112	protein_coding	principal2	10	1	128933818	4013
ENSMUSG00000027857	protein_coding	Tshb	ENSMUST00000197322	protein_coding	principal1	3	-1	102782483	476
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000171888	retained_intron		7	1	128248018	2044
ENSMUSG00000003528	protein_coding	Slc25a1	ENSMUST00000003622	protein_coding	principal1	16	-1	17928219	1666
ENSMUSG00000085070	lincRNA	Gm13211	ENSMUST00000141649	lincRNA		2	-1	7781408	697
ENSMUSG00000104298	unprocessed_pseudogene	Gm38040	ENSMUST00000193505	unprocessed_pseudogene		3	-1	93064964	225
ENSMUSG00000031446	protein_coding	Cul4a	ENSMUST00000016680	protein_coding	principal1	8	1	13105621	3728
ENSMUSG00000027857	protein_coding	Tshb	ENSMUST00000172026	protein_coding	principal1	3	-1	102782714	604
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000165667	protein_coding		7	1	128248018	1812
ENSMUSG00000026395	protein_coding	Ptprc	ENSMUST00000186628	retained_intron		1	-1	138175249	2425
ENSMUSG00000030782	protein_coding	Tgfb1i1	ENSMUST00000170115	nonsense_mediated_decay		7	1	128248176	1287
ENSMUSG00000083721	processed_pseudogene	Gm7700	ENSMUST00000120273	processed_pseudogene		X	1	44862880	970
ENSMUSG00000085564	processed_transcript	Gm12198	ENSMUST00000154068	processed_transcript		11	-1	50602448	1809
ENSMUSG00000025348	protein_coding	Itga7	ENSMUST00000218290	protein_coding	alternative2	10	1	128933820	4020
ENSMUSG00000104291	TEC	A130071D04Rik	ENSMUST00000194467	TEC		1	-1	138167683	5864
ENSMUSG00000030714	protein_coding	Sgf29	ENSMUST00000123571	processed_transcript		7	1	126649309	367
ENSMUSG00000031446	protein_coding	Cul4a	ENSMUST00000135371	retained_intron		8	1	13105740	2006
ENSMUSG00000034189	protein_coding	Hsdl1	ENSMUST00000036049	protein_coding	principal1	8	-1	119575183	3141
ENSMUSG00000020477	protein_coding	Mrps24	ENSMUST00000154330	protein_coding	principal1	11	-1	5707687	995
ENSMUSG00000000562	protein_coding	Adora3	ENSMUST00000000574	protein_coding	principal1	3	1	105904421	2370
ENSMUSG00000031446	protein_coding	Cul4a	ENSMUST00000121426	protein_coding		8	1	13105740	1044
ENSMUSG00000025348	protein_coding	Itga7	ENSMUST00000218387	retained_intron		10	1	128934056	933
ENSMUSG00000040456	protein_coding	H2ap	ENSMUST00000044987	protein_coding	principal1	X	1	9846928	581
ENSMUSG00000100875	lincRNA	Gm28987	ENSMUST00000191071	lincRNA		Y	-1	28911276	537
ENSMUSG00000100875	lincRNA	Gm28987	ENSMUST00000191374	lincRNA		Y	-1	28911276	352
ENSMUSG00000025348	protein_coding	Itga7	ENSMUST00000219897	retained_intron		10	1	128951426	3843
ENSMUSG00000054102	protein_coding	Nlrp9a	ENSMUST00000108387	protein_coding	principal4	7	1	26535023	3336
ENSMUSG00000074067	lincRNA	Gm10619	ENSMUST00000186073	lincRNA		7	-1	73816431	3287
ENSMUSG00000000562	protein_coding	Adora3	ENSMUST00000197613	retained_intron		3	1	105904695	1663
ENSMUSG00000003528	protein_coding	Slc25a1	ENSMUST00000129270	retained_intron		16	-1	17927343	816
ENSMUSG00000025348	protein_coding	Itga7	ENSMUST00000219427	protein_coding		10	1	128953773	984
ENSMUSG00000029625	protein_coding	Cpsf4	ENSMUST00000160574	nonsense_mediated_decay		5	1	145167268	1204
ENSMUSG00000027431	protein_coding	Scp2d1	ENSMUST00000028918	protein_coding	principal1	2	1	144823656	760
ENSMUSG00000031446	protein_coding	Cul4a	ENSMUST00000141315	retained_intron		8	1	13105936	548
ENSMUSG00000034189	protein_coding	Hsdl1	ENSMUST00000212517	protein_coding		8	-1	119569995	2215
ENSMUSG00000074067	lincRNA	Gm10619	ENSMUST00000189466	lincRNA		7	-1	73816503	2696
ENSMUSG00000029625	protein_coding	Cpsf4	ENSMUST00000160762	protein_coding		5	1	145167455	835
ENSMUSG00000090461	protein_coding	Iltifb	ENSMUST00000163808	protein_coding	principal1	10	-1	118295038	1111
ENSMUSG00000020477	protein_coding	Mrps24	ENSMUST00000020770	retained_intron		11	-1	5707667	700
ENSMUSG00000003528	protein_coding	Slc25a1	ENSMUST00000131507	protein_coding		16	-1	17927416	689
ENSMUSG00000048617	protein_coding	Rtbdn	ENSMUST00000067472	protein_coding	principal2	8	1	84946991	1908
ENSMUSG00000074067	lincRNA	Gm10619	ENSMUST00000098372	lincRNA		7	-1	73816503	2695
ENSMUSG00000034189	protein_coding	Hsdl1	ENSMUST00000212065	protein_coding		8	-1	119575181	423
ENSMUSG00000074344	protein_coding	Tmigd3	ENSMUST00000197907	processed_transcript		3	1	105870903	523
ENSMUSG00000054102	protein_coding	Nlrp9a	ENSMUST00000153452	protein_coding		7	1	26535066	2296
ENSMUSG00000082858	processed_pseudogene	Gm11746	ENSMUST00000119843	processed_pseudogene		2	-1	144931678	821
ENSMUSG00000096879	protein_coding	Tdpoz8	ENSMUST00000194595	protein_coding		3	1	93068823	1810
ENSMUSG00000108548	TEC	Gm45006	ENSMUST00000206078	TEC		7	-1	73798292	690
ENSMUSG00000020477	protein_coding	Mrps24	ENSMUST00000149980	processed_transcript		11	-1	5715680	714
ENSMUSG00000034189	protein_coding	Hsdl1	ENSMUST00000212198	protein_coding		8	-1	119575175	295
ENSMUSG00000090461	protein_coding	Iltifb	ENSMUST00000179123	retained_intron		10	-1	118293221	697
ENSMUSG00000096879	protein_coding	Tdpoz8	ENSMUST00000195847	protein_coding	principal1	3	1	93073537	1451
ENSMUSG00000029625	protein_coding	Cpsf4	ENSMUST00000160437	retained_intron		5	1	145170543	2971
ENSMUSG00000025347	protein_coding	Mettl7b	ENSMUST00000026398	protein_coding	principal1	10	-1	128960988	1230
ENSMUSG00000041961	protein_coding	Znrf3	ENSMUST00000109867	protein_coding	principal3	11	-1	5444847	6311
ENSMUSG00000003528	protein_coding	Slc25a1	ENSMUST00000150925	retained_intron		16	-1	17927887	941
ENSMUSG00000104110	TEC	Gm37295	ENSMUST00000192186	TEC		3	1	48078341	109
ENSMUSG00000096879	protein_coding	Tdpoz8	ENSMUST00000179064	protein_coding		3	1	93073567	735
ENSMUSG00000098528	transcribed_processed_pseudogene	Zfp572	ENSMUST00000183674	processed_transcript		15	1	59306948	1098
ENSMUSG00000020477	protein_coding	Mrps24	ENSMUST00000132874	retained_intron		11	-1	5707690	503
ENSMUSG00000098528	transcribed_processed_pseudogene	Zfp572	ENSMUST00000184208	transcribed_processed_pseudogene		15	1	59310853	1078
ENSMUSG00000018593	protein_coding	Sparc	ENSMUST00000108858	protein_coding	alternative2	11	-1	55419898	2115
ENSMUSG00000091606	IG_V_pseudogene	Ighv2-1	ENSMUST00000170946	IG_V_pseudogene		12	-1	113574681	353
ENSMUSG00000003528	protein_coding	Slc25a1	ENSMUST00000142022	retained_intron		16	-1	17928129	495
ENSMUSG00000020477	protein_coding	Mrps24	ENSMUST00000123697	retained_intron		11	-1	5707642	418
ENSMUSG00000108448	lincRNA	Gm21269	ENSMUST00000206521	lincRNA		7	1	73816546	12456
ENSMUSG00000114756	processed_pseudogene	Gm47273	ENSMUST00000225547	processed_pseudogene		18	1	80854309	419
ENSMUSG00000054102	protein_coding	Nlrp9a	ENSMUST00000143149	processed_transcript		7	1	26535071	382
ENSMUSG00000048617	protein_coding	Rtbdn	ENSMUST00000109740	protein_coding	principal2	8	1	84946991	1363
ENSMUSG00000112814	protein_coding	Gm9040	ENSMUST00000177762	protein_coding	principal1	10	-1	118326969	2409
ENSMUSG00000031446	protein_coding	Cul4a	ENSMUST00000125514	nonsense_mediated_decay		8	1	13123525	2570
ENSMUSG00000040818	protein_coding	Dennd6a	ENSMUST00000224248	protein_coding		14	1	26573856	2775
ENSMUSG00000100965	lincRNA	Gm28449	ENSMUST00000187655	lincRNA		1	1	61474951	506
ENSMUSG00000048994	protein_coding	H2al3	ENSMUST00000057113	protein_coding	principal1	X	1	9849703	553
ENSMUSG00000048617	protein_coding	Rtbdn	ENSMUST00000121880	protein_coding	principal2	8	1	84949860	1223
ENSMUSG00000112419	protein_coding	Gm9044	ENSMUST00000179851	protein_coding	principal1	10	-1	118332408	2409
ENSMUSG00000102168	TEC	Gm36943	ENSMUST00000194422	TEC		1	1	61545882	282
ENSMUSG00000041961	protein_coding	Znrf3	ENSMUST00000172492	protein_coding	alternative2	11	-1	5381740	4926
ENSMUSG00000031446	protein_coding	Cul4a	ENSMUST00000139316	retained_intron		8	1	13139843	574
ENSMUSG00000003528	protein_coding	Slc25a1	ENSMUST00000147384	retained_intron		16	-1	17928209	460
ENSMUSG00000054102	protein_coding	Nlrp9a	ENSMUST00000122040	protein_coding	alternative2	7	1	26550812	2850
ENSMUSG00000108851	antisense	Gm44930	ENSMUST00000208733	antisense		7	1	144742113	689
ENSMUSG00000037086	protein_coding	Prr32	ENSMUST00000040002	protein_coding	principal1	X	1	45090904	1110
ENSMUSG00000108851	antisense	Gm44930	ENSMUST00000207545	antisense		7	1	144747192	489
ENSMUSG00000048216	protein_coding	Gpr85	ENSMUST00000060442	protein_coding	principal1	6	-1	13839942	3661
ENSMUSG00000041961	protein_coding	Znrf3	ENSMUST00000143746	protein_coding		11	-1	5444847	1022
ENSMUSG00000031446	protein_coding	Cul4a	ENSMUST00000142700	processed_transcript		8	1	13140307	357
ENSMUSG00000109809	protein_coding	Gm34066	ENSMUST00000210156	protein_coding	principal1	1	-1	54456763	825
ENSMUSG00000048617	protein_coding	Rtbdn	ENSMUST00000152378	protein_coding	alternative2	8	1	84951181	2322
ENSMUSG00000040818	protein_coding	Dennd6a	ENSMUST00000224378	protein_coding		14	1	26573858	2424
ENSMUSG00000076633	IG_V_gene	Ighv5-2	ENSMUST00000195468	IG_V_gene	principal5	12	-1	113578990	353
ENSMUSG00000031446	protein_coding	Cul4a	ENSMUST00000125646	retained_intron		8	1	13144225	1614
ENSMUSG00000040818	protein_coding	Dennd6a	ENSMUST00000224111	protein_coding		14	1	26573859	2692
ENSMUSG00000074344	protein_coding	Tmigd3	ENSMUST00000200482	nonsense_mediated_decay		3	1	105870907	752
ENSMUSG00000054102	protein_coding	Nlrp9a	ENSMUST00000117252	protein_coding		7	1	26550812	2796
ENSMUSG00000106534	processed_pseudogene	Gm6366	ENSMUST00000198766	processed_pseudogene		5	-1	89499977	826
ENSMUSG00000076633	IG_V_gene	Ighv5-2	ENSMUST00000103442	IG_V_gene	alternative2	12	-1	113578990	350
ENSMUSG00000104715	TEC	Gm43515	ENSMUST00000197930	TEC		5	1	89522860	2141
ENSMUSG00000048216	protein_coding	Gpr85	ENSMUST00000115492	protein_coding	principal1	6	-1	13838454	2182
ENSMUSG00000110816	processed_pseudogene	Gm19178	ENSMUST00000217524	processed_pseudogene		9	-1	18300651	1819
ENSMUSG00000052397	protein_coding	Ezr	ENSMUST00000064234	protein_coding	principal1	17	-1	6782784	3164
ENSMUSG00000100381	processed_pseudogene	Gm28094	ENSMUST00000185262	processed_pseudogene		1	1	61548122	390
ENSMUSG00000054102	protein_coding	Nlrp9a	ENSMUST00000071780	protein_coding	alternative2	7	1	26535065	3125
ENSMUSG00000037910	lincRNA	1700018B24Rik	ENSMUST00000036023	lincRNA		3	-1	48609102	593
ENSMUSG00000021917	protein_coding	Spcs1	ENSMUST00000226782	protein_coding		14	-1	31001609	949
ENSMUSG00000027806	protein_coding	Tsc22d2	ENSMUST00000099090	protein_coding	principal3	3	1	58414715	9799
ENSMUSG00000048216	protein_coding	Gpr85	ENSMUST00000115491	protein_coding	principal1	6	-1	13837241	2165
ENSMUSG00000099866	lincRNA	Gm28889	ENSMUST00000186829	lincRNA		Y	1	60115080	352
ENSMUSG00000074283	protein_coding	Zfp109	ENSMUST00000206362	protein_coding	principal2	7	-1	24237560	2932
ENSMUSG00000112027	protein_coding	Gm9045	ENSMUST00000219760	protein_coding	principal1	10	-1	118337831	2409
ENSMUSG00000074283	protein_coding	Zfp109	ENSMUST00000206960	protein_coding	alternative2	7	-1	24237225	2130
ENSMUSG00000052397	protein_coding	Ezr	ENSMUST00000131131	processed_transcript		17	-1	6742821	643
ENSMUSG00000074283	protein_coding	Zfp109	ENSMUST00000037448	protein_coding	principal2	7	-1	24236632	1935
ENSMUSG00000018593	protein_coding	Sparc	ENSMUST00000018737	protein_coding	principal3	11	-1	55420080	2300
ENSMUSG00000048216	protein_coding	Gpr85	ENSMUST00000127072	processed_transcript		6	-1	13839495	747
ENSMUSG00000096464	IG_V_gene	Ighv2-2	ENSMUST00000103443	IG_V_gene	principal1	12	-1	113588702	352
ENSMUSG00000021917	protein_coding	Spcs1	ENSMUST00000228767	protein_coding		14	-1	31001672	1008
ENSMUSG00000099866	lincRNA	Gm28889	ENSMUST00000185350	lincRNA		Y	1	60115080	959
ENSMUSG00000097276	antisense	4930525G20Rik	ENSMUST00000181912	antisense		13	-1	67830985	2987
ENSMUSG00000102181	lincRNA	Gm37190	ENSMUST00000193580	lincRNA		3	-1	48760949	688
ENSMUSG00000083269	processed_pseudogene	Gm13254	ENSMUST00000118295	processed_pseudogene		2	-1	8147865	654
ENSMUSG00000027806	protein_coding	Tsc22d2	ENSMUST00000199164	protein_coding	alternative2	3	1	58414720	4659
ENSMUSG00000097906	processed_pseudogene	Gm9625	ENSMUST00000180422	processed_pseudogene		13	1	67810246	955
ENSMUSG00000084374	processed_pseudogene	Gm13255	ENSMUST00000117255	processed_pseudogene		2	1	8633937	547
ENSMUSG00000103934	IG_V_pseudogene	Ighv5-3	ENSMUST00000195336	IG_V_pseudogene		12	-1	113590413	322
ENSMUSG00000021917	protein_coding	Spcs1	ENSMUST00000228736	protein_coding	principal1	14	-1	31001363	702
ENSMUSG00000117101	processed_pseudogene	Gm8950	ENSMUST00000232696	processed_pseudogene		6	-1	23164090	715
ENSMUSG00000100117	lincRNA	Gm28986	ENSMUST00000189682	lincRNA		Y	1	28994508	678
ENSMUSG00000018593	protein_coding	Sparc	ENSMUST00000123775	retained_intron		11	-1	55399574	909
ENSMUSG00000018593	protein_coding	Sparc	ENSMUST00000213866	protein_coding	alternative2	11	-1	55420290	1366
ENSMUSG00000053070	protein_coding	Cfap300	ENSMUST00000065291	protein_coding	principal1	9	-1	8042823	1592
ENSMUSG00000112781	protein_coding	Gm9046	ENSMUST00000218329	protein_coding	principal1	10	-1	118343255	2409
ENSMUSG00000101305	processed_pseudogene	Gm29171	ENSMUST00000191397	processed_pseudogene		Y	-1	29090168	486
ENSMUSG00000100394	sense_intronic	Gm28791	ENSMUST00000185888	sense_intronic		1	-1	152880298	1779
ENSMUSG00000107032	processed_pseudogene	Gm5301	ENSMUST00000096093	processed_pseudogene		6	-1	23167414	2074
ENSMUSG00000018593	protein_coding	Sparc	ENSMUST00000216313	protein_coding	alternative2	11	-1	55420325	1304
ENSMUSG00000083844	transcribed_unprocessed_pseudogene	Ube2d-ps	ENSMUST00000137510	processed_transcript		11	1	5762129	1846
ENSMUSG00000043003	protein_coding	Rasef	ENSMUST00000058292	protein_coding		4	-1	73790602	5183
ENSMUSG00000074113	lincRNA	Gm10629	ENSMUST00000137706	lincRNA		8	1	106283307	2014
ENSMUSG00000018593	protein_coding	Sparc	ENSMUST00000214685	protein_coding	principal3	11	-1	55423183	1269
ENSMUSG00000086009	lincRNA	4930587A21Rik	ENSMUST00000128588	lincRNA		1	-1	61621149	851
ENSMUSG00000082953	unprocessed_pseudogene	Gm13217	ENSMUST00000120466	unprocessed_pseudogene		2	-1	9042484	953
ENSMUSG00000021917	protein_coding	Spcs1	ENSMUST00000226290	retained_intron		14	-1	31001369	1241
ENSMUSG00000027806	protein_coding	Tsc22d2	ENSMUST00000199784	retained_intron		3	1	58415878	3022
ENSMUSG00000101110	lincRNA	Gm28890	ENSMUST00000186686	lincRNA		Y	1	60149350	173
ENSMUSG00000053070	protein_coding	Cfap300	ENSMUST00000215478	protein_coding		9	-1	8042813	533
ENSMUSG00000018593	protein_coding	Sparc	ENSMUST00000130642	retained_intron		11	-1	55402165	741
ENSMUSG00000021917	protein_coding	Spcs1	ENSMUST00000227838	retained_intron		14	-1	31001350	378
ENSMUSG00000018593	protein_coding	Sparc	ENSMUST00000141530	protein_coding		11	-1	55419898	640
ENSMUSG00000074344	protein_coding	Tmigd3	ENSMUST00000010279	protein_coding	principal2	3	1	105870907	900
ENSMUSG00000038845	protein_coding	Phb	ENSMUST00000125172	protein_coding	principal1	11	1	95666957	1799
ENSMUSG00000022671	protein_coding	Mzt2	ENSMUST00000023351	protein_coding	principal2	16	-1	15863347	1035
ENSMUSG00000083844	transcribed_unprocessed_pseudogene	Ube2d-ps	ENSMUST00000131130	processed_transcript		11	1	5762150	595
ENSMUSG00000043003	protein_coding	Rasef	ENSMUST00000102837	protein_coding		4	-1	73790709	5158
ENSMUSG00000021917	protein_coding	Spcs1	ENSMUST00000226374	protein_coding		14	-1	31001367	592
ENSMUSG00000018593	protein_coding	Sparc	ENSMUST00000125787	retained_intron		11	-1	55419900	907
ENSMUSG00000043003	protein_coding	Rasef	ENSMUST00000222414	protein_coding	principal1	4	-1	73790994	2127
ENSMUSG00000038845	protein_coding	Phb	ENSMUST00000036374	protein_coding		11	1	95667064	724
ENSMUSG00000027806	protein_coding	Tsc22d2	ENSMUST00000196049	nonsense_mediated_decay		3	1	58417484	715
ENSMUSG00000021917	protein_coding	Spcs1	ENSMUST00000186131	protein_coding		14	-1	31001666	1005
ENSMUSG00000074344	protein_coding	Tmigd3	ENSMUST00000199107	processed_transcript		3	1	105870977	300
ENSMUSG00000099650	lincRNA	Gm28129	ENSMUST00000186273	lincRNA		Y	1	29156796	537
ENSMUSG00000022671	protein_coding	Mzt2	ENSMUST00000137864	retained_intron		16	-1	15862722	612
ENSMUSG00000099650	lincRNA	Gm28129	ENSMUST00000187670	lincRNA		Y	1	29156796	352
ENSMUSG00000030714	protein_coding	Sgf29	ENSMUST00000032956	protein_coding	principal1	7	1	126649309	1312
ENSMUSG00000022671	protein_coding	Mzt2	ENSMUST00000229680	protein_coding	alternative2	16	-1	15863310	1066
ENSMUSG00000085034	processed_transcript	Gm11240	ENSMUST00000142047	processed_transcript		4	1	73791246	751
ENSMUSG00000038845	protein_coding	Phb	ENSMUST00000127031	processed_transcript		11	1	95667010	610
ENSMUSG00000083530	unprocessed_pseudogene	Gm13867	ENSMUST00000120844	unprocessed_pseudogene		4	1	73864397	395
ENSMUSG00000103408	lincRNA	Gm37933	ENSMUST00000193964	lincRNA		3	1	86142757	981
ENSMUSG00000074344	protein_coding	Tmigd3	ENSMUST00000198080	protein_coding	principal2	3	1	105914136	832
ENSMUSG00000102218	processed_pseudogene	Gm37493	ENSMUST00000193167	processed_pseudogene		3	-1	86145369	433
ENSMUSG00000050190	protein_coding	Adam34l	ENSMUST00000056023	protein_coding	principal1	8	-1	43627276	2326
ENSMUSG00000038845	protein_coding	Phb	ENSMUST00000123071	processed_transcript		11	1	95667000	414
ENSMUSG00000074344	protein_coding	Tmigd3	ENSMUST00000199977	protein_coding	alternative2	3	1	105914136	838
ENSMUSG00000038845	protein_coding	Phb	ENSMUST00000123001	processed_transcript		11	1	95671450	733
ENSMUSG00000029697	protein_coding	Fezf1	ENSMUST00000031709	protein_coding	principal1	6	-1	23248362	2409
ENSMUSG00000022671	protein_coding	Mzt2	ENSMUST00000117136	protein_coding	principal2	16	-1	15863369	758
ENSMUSG00000101560	lincRNA	Gm28127	ENSMUST00000185293	lincRNA		Y	1	29219692	622
ENSMUSG00000083069	unprocessed_pseudogene	Gm16431	ENSMUST00000117454	unprocessed_pseudogene		X	1	54968283	431
ENSMUSG00000101560	lincRNA	Gm28127	ENSMUST00000190634	lincRNA		Y	1	29219692	437
ENSMUSG00000038883	protein_coding	Prl3a1	ENSMUST00000049463	protein_coding	principal1	13	1	27259436	1342
ENSMUSG00000113090	lincRNA	Gm48190	ENSMUST00000220666	lincRNA		13	-1	52096668	2924
ENSMUSG00000030446	protein_coding	Zfp273	ENSMUST00000181391	protein_coding	principal1	13	1	67813740	2399
ENSMUSG00000083844	transcribed_unprocessed_pseudogene	Ube2d-ps	ENSMUST00000142942	processed_transcript		11	1	5762150	1840
ENSMUSG00000030714	protein_coding	Sgf29	ENSMUST00000126570	protein_coding		7	1	126649312	460
ENSMUSG00000113090	lincRNA	Gm48190	ENSMUST00000222306	lincRNA		13	-1	52096642	726
ENSMUSG00000094423	unprocessed_pseudogene	Gm7950	ENSMUST00000179633	unprocessed_pseudogene		X	1	55020844	468
ENSMUSG00000030714	protein_coding	Sgf29	ENSMUST00000123274	retained_intron		7	1	126649322	424
ENSMUSG00000030446	protein_coding	Zfp273	ENSMUST00000181246	retained_intron		13	1	67813812	1485
ENSMUSG00000038883	protein_coding	Prl3a1	ENSMUST00000223739	retained_intron		13	1	27274655	791
ENSMUSG00000085232	processed_pseudogene	Gm11962	ENSMUST00000145746	processed_pseudogene		11	-1	5495446	255
ENSMUSG00000024696	protein_coding	Lpxn	ENSMUST00000235690	protein_coding	alternative2	19	1	12796193	1707
ENSMUSG00000028558	protein_coding	Calr4	ENSMUST00000106629	protein_coding		4	1	109234485	1583
ENSMUSG00000059562	protein_coding	Ccdc154	ENSMUST00000183178	nonsense_mediated_decay		17	1	25162461	2523
ENSMUSG00000083844	transcribed_unprocessed_pseudogene	Ube2d-ps	ENSMUST00000121354	transcribed_unprocessed_pseudogene		11	1	5762217	441
ENSMUSG00000030714	protein_coding	Sgf29	ENSMUST00000152231	retained_intron		7	1	126649347	786
ENSMUSG00000106775	TEC	C130093G08Rik	ENSMUST00000202489	TEC		6	1	23251133	2226
ENSMUSG00000095890	unprocessed_pseudogene	Gm7958	ENSMUST00000178255	unprocessed_pseudogene		X	1	55097191	468
ENSMUSG00000083844	transcribed_unprocessed_pseudogene	Ube2d-ps	ENSMUST00000135394	processed_transcript		11	1	5765509	877
ENSMUSG00000030446	protein_coding	Zfp273	ENSMUST00000012725	protein_coding		13	1	67813816	2277
ENSMUSG00000038774	protein_coding	Ascc3	ENSMUST00000035606	protein_coding	principal1	10	1	50592669	7760
ENSMUSG00000085189	antisense	Gm11963	ENSMUST00000149826	antisense		11	1	5498840	500
ENSMUSG00000110036	processed_pseudogene	Gm6303	ENSMUST00000210123	processed_pseudogene		8	-1	43729949	471
ENSMUSG00000085580	lincRNA	1700061F12Rik	ENSMUST00000132414	lincRNA		2	1	9189515	876
ENSMUSG00000030714	protein_coding	Sgf29	ENSMUST00000205507	nonsense_mediated_decay		7	1	126649402	777
ENSMUSG00000028558	protein_coding	Calr4	ENSMUST00000106631	protein_coding		4	1	109235262	2155
ENSMUSG00000054400	protein_coding	Cklf	ENSMUST00000034342	protein_coding	principal4	8	1	104250861	667
ENSMUSG00000110155	processed_pseudogene	Gm35629	ENSMUST00000209684	processed_pseudogene		8	-1	43701498	2241
ENSMUSG00000029032	protein_coding	Arhgef16	ENSMUST00000143141	retained_intron		4	-1	154282499	2671
ENSMUSG00000117924	protein_coding	Tmem223	ENSMUST00000010248	protein_coding	principal1	19	1	8770996	748
ENSMUSG00000038774	protein_coding	Ascc3	ENSMUST00000220355	protein_coding		10	1	50596816	1250
ENSMUSG00000020936	protein_coding	Nmt1	ENSMUST00000135332	processed_transcript		11	1	103028190	449
ENSMUSG00000030714	protein_coding	Sgf29	ENSMUST00000206359	nonsense_mediated_decay		7	1	126661072	732
ENSMUSG00000110224	processed_pseudogene	Gm6011	ENSMUST00000211736	processed_pseudogene		8	-1	43724064	1796
ENSMUSG00000101954	lincRNA	Gm28128	ENSMUST00000187403	lincRNA		Y	1	29263852	174
ENSMUSG00000028558	protein_coding	Calr4	ENSMUST00000106628	protein_coding		4	1	109235413	1768
ENSMUSG00000030714	protein_coding	Sgf29	ENSMUST00000138794	retained_intron		7	1	126663793	344
ENSMUSG00000038774	protein_coding	Ascc3	ENSMUST00000219226	protein_coding		10	1	50604751	1357
ENSMUSG00000024696	protein_coding	Lpxn	ENSMUST00000025601	protein_coding	principal2	19	1	12798597	1684
ENSMUSG00000091206	protein_coding	Vmn2r91	ENSMUST00000172359	protein_coding	principal1	17	1	18085016	2737
ENSMUSG00000038774	protein_coding	Ascc3	ENSMUST00000220178	retained_intron		10	1	50604772	1673
ENSMUSG00000038774	protein_coding	Ascc3	ENSMUST00000217968	retained_intron		10	1	50642442	1730
ENSMUSG00000054400	protein_coding	Cklf	ENSMUST00000212433	protein_coding	alternative2	8	1	104250882	1304
ENSMUSG00000030714	protein_coding	Sgf29	ENSMUST00000129786	protein_coding		7	1	126671577	511
ENSMUSG00000110168	antisense	Gm45488	ENSMUST00000210747	antisense		8	1	43703479	371
ENSMUSG00000011751	protein_coding	Sptbn4	ENSMUST00000011895	protein_coding	principal2	7	-1	27446599	8747
ENSMUSG00000096707	unprocessed_pseudogene	Vmn2r-ps44	ENSMUST00000174053	unprocessed_pseudogene		7	-1	8825685	2412
ENSMUSG00000030714	protein_coding	Sgf29	ENSMUST00000123382	processed_transcript		7	1	126672031	416
ENSMUSG00000112923	processed_pseudogene	Gm8768	ENSMUST00000220020	processed_pseudogene		10	1	103429910	826
ENSMUSG00000079058	protein_coding	Adam34	ENSMUST00000110411	protein_coding	principal1	8	-1	43710049	2584
ENSMUSG00000038774	protein_coding	Ascc3	ENSMUST00000220026	retained_intron		10	1	50649055	697
ENSMUSG00000054400	protein_coding	Cklf	ENSMUST00000212410	nonsense_mediated_decay		8	1	104250892	750
ENSMUSG00000030486	protein_coding	Zfp108	ENSMUST00000206777	protein_coding	principal2	7	1	24254794	2562
ENSMUSG00000038774	protein_coding	Ascc3	ENSMUST00000219085	retained_intron		10	1	50728958	5506
ENSMUSG00000054400	protein_coding	Cklf	ENSMUST00000211809	protein_coding	alternative2	8	1	104250903	525
ENSMUSG00000030486	protein_coding	Zfp108	ENSMUST00000205982	protein_coding	principal2	7	1	24255040	2577
ENSMUSG00000079058	protein_coding	Adam34	ENSMUST00000212185	protein_coding	principal1	8	-1	43699487	2335
ENSMUSG00000035528	protein_coding	Npffr2	ENSMUST00000048557	protein_coding	principal1	5	1	89527429	1643
ENSMUSG00000028558	protein_coding	Calr4	ENSMUST00000030285	protein_coding	principal1	4	1	109235632	1606
ENSMUSG00000030486	protein_coding	Zfp108	ENSMUST00000072713	protein_coding	alternative2	7	1	24257644	1929
ENSMUSG00000038774	protein_coding	Ascc3	ENSMUST00000219172	retained_intron		10	1	50753841	529
ENSMUSG00000029032	protein_coding	Arhgef16	ENSMUST00000144145	retained_intron		4	-1	154299892	4123
ENSMUSG00000110347	processed_pseudogene	Gm45657	ENSMUST00000211318	processed_pseudogene		8	-1	43750400	1349
ENSMUSG00000038774	protein_coding	Ascc3	ENSMUST00000217725	processed_transcript		10	1	50763796	783
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000115577	protein_coding	principal4	6	-1	4747176	1776
ENSMUSG00000054400	protein_coding	Cklf	ENSMUST00000098464	protein_coding	alternative2	8	1	104250930	1804
ENSMUSG00000112594	processed_pseudogene	Gm48333	ENSMUST00000220349	processed_pseudogene		10	1	50813725	266
ENSMUSG00000118612	processed_pseudogene	AL589679.1	ENSMUST00000239312	processed_pseudogene		13	1	27301447	237
ENSMUSG00000109723	processed_pseudogene	Gm5347	ENSMUST00000210542	processed_pseudogene		8	-1	43676047	2327
ENSMUSG00000086698	lincRNA	4930511O05Rik	ENSMUST00000155912	lincRNA		13	1	27292616	391
ENSMUSG00000028558	protein_coding	Calr4	ENSMUST00000141555	processed_transcript		4	1	109244582	532
ENSMUSG00000054400	protein_coding	Cklf	ENSMUST00000212939	protein_coding	alternative2	8	1	104250944	737
ENSMUSG00000054400	protein_coding	Cklf	ENSMUST00000212422	processed_transcript		8	1	104258126	642
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000115579	protein_coding	alternative1	6	-1	4747204	1696
ENSMUSG00000040818	protein_coding	Dennd6a	ENSMUST00000203874	protein_coding		14	1	26579561	2677
ENSMUSG00000054400	protein_coding	Cklf	ENSMUST00000212688	processed_transcript		8	1	104258235	2937
ENSMUSG00000003341	protein_coding	Atp8b3	ENSMUST00000020383	protein_coding	principal1	10	-1	80539124	4412
ENSMUSG00000107647	TEC	Gm44445	ENSMUST00000204075	TEC		6	1	52560552	2683
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000126151	protein_coding		6	-1	4747157	1522
ENSMUSG00000107813	TEC	Gm44434	ENSMUST00000203918	TEC		6	-1	52603245	3745
ENSMUSG00000054400	protein_coding	Cklf	ENSMUST00000211829	nonsense_mediated_decay		8	1	104258552	504
ENSMUSG00000095141	protein_coding	Gm28891	ENSMUST00000189333	protein_coding	principal1	Y	1	60241202	927
ENSMUSG00000080885	processed_pseudogene	Rpl10-ps6	ENSMUST00000121321	processed_pseudogene		19	-1	37295796	642
ENSMUSG00000095141	protein_coding	Gm28891	ENSMUST00000178751	protein_coding		Y	1	60242635	498
ENSMUSG00000054400	protein_coding	Cklf	ENSMUST00000212259	processed_transcript		8	1	104262147	309
ENSMUSG00000055305	protein_coding	Zfp93	ENSMUST00000108438	protein_coding	principal1	7	1	24270420	3508
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000004750	protein_coding	alternative1	6	-1	4747207	1703
ENSMUSG00000003341	protein_coding	Atp8b3	ENSMUST00000220326	nonsense_mediated_decay		10	-1	80539124	3823
ENSMUSG00000055305	protein_coding	Zfp93	ENSMUST00000155851	processed_transcript		7	1	24270613	207
ENSMUSG00000011751	protein_coding	Sptbn4	ENSMUST00000152572	protein_coding		7	-1	27447686	493
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000090686	protein_coding		6	-1	4747116	1547
ENSMUSG00000004748	protein_coding	Mtfp1	ENSMUST00000004868	protein_coding	principal1	11	-1	4095445	1411
ENSMUSG00000055305	protein_coding	Zfp93	ENSMUST00000032696	protein_coding	principal1	7	1	24271568	2324
ENSMUSG00000011751	protein_coding	Sptbn4	ENSMUST00000137414	processed_transcript		7	-1	27446517	369
ENSMUSG00000017376	protein_coding	Nlk	ENSMUST00000142739	protein_coding	principal1	11	-1	78697373	4444
ENSMUSG00000004748	protein_coding	Mtfp1	ENSMUST00000123607	processed_transcript		11	-1	4095140	410
ENSMUSG00000083096	processed_pseudogene	Gm11356	ENSMUST00000118974	processed_pseudogene		13	1	27306712	192
ENSMUSG00000040818	protein_coding	Dennd6a	ENSMUST00000037585	protein_coding	principal1	14	1	26579578	6638
ENSMUSG00000030092	protein_coding	Cntn6	ENSMUST00000161070	protein_coding		6	1	104492811	3515
ENSMUSG00000059562	protein_coding	Ccdc154	ENSMUST00000182621	protein_coding	principal2	17	1	25162464	2402
ENSMUSG00000027459	protein_coding	Fam110a	ENSMUST00000109865	protein_coding	principal1	2	-1	151973935	1853
ENSMUSG00000096538	unprocessed_pseudogene	Gm21853	ENSMUST00000180071	unprocessed_pseudogene		Y	1	29351836	664
ENSMUSG00000017376	protein_coding	Nlk	ENSMUST00000165475	processed_transcript		11	-1	78568916	564
ENSMUSG00000059562	protein_coding	Ccdc154	ENSMUST00000182292	protein_coding	alternative2	17	1	25162842	1989
ENSMUSG00000036545	protein_coding	Adamts2	ENSMUST00000142118	protein_coding	alternative2	11	1	50602084	5079
ENSMUSG00000003341	protein_coding	Atp8b3	ENSMUST00000219648	protein_coding		10	-1	80539090	524
ENSMUSG00000011751	protein_coding	Sptbn4	ENSMUST00000172269	protein_coding	alternative2	7	-1	27447686	8737
ENSMUSG00000025823	protein_coding	Pdia4	ENSMUST00000077290	protein_coding	principal1	6	-1	47813430	2399
ENSMUSG00000017376	protein_coding	Nlk	ENSMUST00000170394	protein_coding		11	-1	78572399	673
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000226740	nonsense_mediated_decay		14	-1	31019018	1765
ENSMUSG00000027459	protein_coding	Fam110a	ENSMUST00000109864	protein_coding	principal1	2	-1	151973966	1591
ENSMUSG00000040818	protein_coding	Dennd6a	ENSMUST00000225206	processed_transcript		14	1	26604671	738
ENSMUSG00000108416	processed_transcript	Gm44924	ENSMUST00000138087	processed_transcript		7	1	27433136	421
ENSMUSG00000017376	protein_coding	Nlk	ENSMUST00000165271	retained_intron		11	-1	78696494	1875
ENSMUSG00000082110	processed_pseudogene	Gm11196	ENSMUST00000119052	processed_pseudogene		11	-1	78585555	395
ENSMUSG00000096052	antisense	9930004E17Rik	ENSMUST00000180031	antisense		14	1	26670010	498
ENSMUSG00000022844	protein_coding	Pdia5	ENSMUST00000023550	protein_coding	principal1	16	-1	35490873	1809
ENSMUSG00000025823	protein_coding	Pdia4	ENSMUST00000204029	processed_transcript		6	-1	47813364	347
ENSMUSG00000036545	protein_coding	Adamts2	ENSMUST00000040523	protein_coding	principal2	11	1	50602084	7266
ENSMUSG00000080180	processed_pseudogene	Gm17235	ENSMUST00000169128	processed_pseudogene		11	1	78576237	964
ENSMUSG00000001588	protein_coding	Acap1	ENSMUST00000108622	retained_intron		11	-1	69890331	2086
ENSMUSG00000091014	protein_coding	Gm5244	ENSMUST00000189517	protein_coding	principal1	19	1	12846682	743
ENSMUSG00000027459	protein_coding	Fam110a	ENSMUST00000062047	protein_coding	principal1	2	-1	151980219	1754
ENSMUSG00000095612	IG_V_gene	Ighv5-4	ENSMUST00000103444	IG_V_gene	principal1	12	-1	113597977	425
ENSMUSG00000036545	protein_coding	Adamts2	ENSMUST00000125988	processed_transcript		11	1	50776179	368
ENSMUSG00000022844	protein_coding	Pdia5	ENSMUST00000231779	processed_transcript		16	-1	35413175	679
ENSMUSG00000052419	protein_coding	2610001J05Rik	ENSMUST00000139231	protein_coding	principal1	6	-1	13871518	3177
ENSMUSG00000029776	protein_coding	Hibadh	ENSMUST00000031788	protein_coding	principal1	6	-1	52640389	1825
ENSMUSG00000057149	protein_coding	Olfr1301	ENSMUST00000207590	protein_coding	principal1	2	1	111751006	4820
ENSMUSG00000036545	protein_coding	Adamts2	ENSMUST00000127534	processed_transcript		11	1	50781770	212
ENSMUSG00000022844	protein_coding	Pdia5	ENSMUST00000231406	retained_intron		16	-1	35413185	706
ENSMUSG00000057149	protein_coding	Olfr1301	ENSMUST00000080094	protein_coding	principal1	2	1	111754251	939
ENSMUSG00000059562	protein_coding	Ccdc154	ENSMUST00000073277	protein_coding	alternative2	17	1	25162461	2417
ENSMUSG00000052419	protein_coding	2610001J05Rik	ENSMUST00000155856	protein_coding	principal1	6	-1	13871466	1077
ENSMUSG00000027459	protein_coding	Fam110a	ENSMUST00000109863	protein_coding	principal1	2	-1	151973394	1284
ENSMUSG00000022844	protein_coding	Pdia5	ENSMUST00000231595	processed_transcript		16	-1	35490589	745
ENSMUSG00000086501	lincRNA	4930597A21Rik	ENSMUST00000128652	lincRNA		11	1	44586317	698
ENSMUSG00000118346	protein_coding	Tmem179b	ENSMUST00000237634	nonsense_mediated_decay		19	-1	8774467	775
ENSMUSG00000029776	protein_coding	Hibadh	ENSMUST00000155948	retained_intron		6	-1	52630258	880
ENSMUSG00000112495	protein_coding	Gm9048	ENSMUST00000177744	protein_coding	principal1	10	-1	118348679	2409
ENSMUSG00000052419	protein_coding	2610001J05Rik	ENSMUST00000185219	protein_coding	principal1	6	-1	13871465	1606
ENSMUSG00000102563	TEC	Gm37695	ENSMUST00000191765	TEC		11	-1	44617016	530
ENSMUSG00000080889	unprocessed_pseudogene	Gm7974	ENSMUST00000117154	unprocessed_pseudogene		X	1	55175816	408
ENSMUSG00000001774	protein_coding	Chordc1	ENSMUST00000001825	protein_coding	principal1	9	1	18292125	5789
ENSMUSG00000085902	antisense	Gm12200	ENSMUST00000144876	antisense		11	-1	50725544	1858
ENSMUSG00000118346	protein_coding	Tmem179b	ENSMUST00000235756	processed_transcript		19	-1	8774445	499
ENSMUSG00000029776	protein_coding	Hibadh	ENSMUST00000149471	retained_intron		6	-1	52556915	598
ENSMUSG00000052419	protein_coding	2610001J05Rik	ENSMUST00000185361	protein_coding	principal1	6	-1	13871465	767
ENSMUSG00000029776	protein_coding	Hibadh	ENSMUST00000203504	retained_intron		6	-1	52556517	2104
ENSMUSG00000044560	protein_coding	Olfr1302	ENSMUST00000214708	protein_coding	alternative2	2	1	111777429	2461
ENSMUSG00000094557	processed_pseudogene	Rpl35a-ps7	ENSMUST00000080603	processed_pseudogene		6	-1	47815632	333
ENSMUSG00000087080	antisense	Gm12199	ENSMUST00000137567	antisense		11	-1	50718915	517
ENSMUSG00000102263	lincRNA	Gm31415	ENSMUST00000194963	lincRNA		3	1	49062378	344
ENSMUSG00000112636	lincRNA	Gm47223	ENSMUST00000219620	lincRNA		10	1	103507362	537
ENSMUSG00000044560	protein_coding	Olfr1302	ENSMUST00000215244	protein_coding	alternative2	2	1	111777429	2729
ENSMUSG00000083423	processed_pseudogene	Gm13221	ENSMUST00000121712	processed_pseudogene		2	-1	9270509	430
ENSMUSG00000112839	processed_pseudogene	Gm47222	ENSMUST00000217758	processed_pseudogene		10	-1	103569401	193
ENSMUSG00000112644	processed_pseudogene	Gm47220	ENSMUST00000218950	processed_pseudogene		10	1	103567646	406
ENSMUSG00000029776	protein_coding	Hibadh	ENSMUST00000205086	retained_intron		6	-1	52640315	6084
ENSMUSG00000001774	protein_coding	Chordc1	ENSMUST00000216526	retained_intron		9	1	18292300	659
ENSMUSG00000044560	protein_coding	Olfr1302	ENSMUST00000054004	protein_coding	principal2	2	1	111780313	948
ENSMUSG00000112319	lincRNA	Gm47221	ENSMUST00000218784	lincRNA		10	1	103512928	2287
ENSMUSG00000112919	protein_coding	Gm9049	ENSMUST00000178998	protein_coding	principal1	10	-1	118354105	2409
ENSMUSG00000020936	protein_coding	Nmt1	ENSMUST00000021314	protein_coding	principal1	11	1	103028346	4861
ENSMUSG00000046272	protein_coding	Olfr1444	ENSMUST00000213606	protein_coding	principal1	19	1	12857283	1872
ENSMUSG00000099348	lincRNA	Gm28132	ENSMUST00000189901	lincRNA		Y	1	29395248	166
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000097430	protein_coding	principal1	17	1	6659093	2423
ENSMUSG00000001774	protein_coding	Chordc1	ENSMUST00000214441	retained_intron		9	1	18292301	941
ENSMUSG00000072982	lincRNA	9230009I02Rik	ENSMUST00000101255	lincRNA		11	1	51085087	1148
ENSMUSG00000001774	protein_coding	Chordc1	ENSMUST00000213605	protein_coding		9	1	18292306	519
ENSMUSG00000118346	protein_coding	Tmem179b	ENSMUST00000010249	protein_coding	principal1	19	-1	8774467	818
ENSMUSG00000020936	protein_coding	Nmt1	ENSMUST00000148795	processed_transcript		11	1	103028585	711
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000162013	processed_transcript		17	1	6663014	1619
ENSMUSG00000060098	protein_coding	Prmt7	ENSMUST00000071592	protein_coding	principal1	8	1	106210936	3472
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000133306	protein_coding		6	-1	4747124	1619
ENSMUSG00000107562	processed_pseudogene	Gm44412	ENSMUST00000203018	processed_pseudogene		6	-1	13913448	294
ENSMUSG00000046272	protein_coding	Olfr1444	ENSMUST00000059675	protein_coding	principal1	19	1	12861742	1129
ENSMUSG00000107942	processed_pseudogene	Gm44411	ENSMUST00000204172	processed_pseudogene		6	1	14006007	349
ENSMUSG00000029032	protein_coding	Arhgef16	ENSMUST00000030898	protein_coding	principal1	4	-1	154300054	2860
ENSMUSG00000060098	protein_coding	Prmt7	ENSMUST00000109297	protein_coding		8	1	106211023	1094
ENSMUSG00000097616	lincRNA	1110019D14Rik	ENSMUST00000181090	lincRNA		6	1	13871526	403
ENSMUSG00000023439	protein_coding	Gnb3	ENSMUST00000024206	protein_coding	principal1	6	-1	124840275	1846
ENSMUSG00000001774	protein_coding	Chordc1	ENSMUST00000216800	nonsense_mediated_decay		9	1	18292348	533
ENSMUSG00000097616	lincRNA	1110019D14Rik	ENSMUST00000181225	lincRNA		6	1	13871569	1499
ENSMUSG00000080918	unprocessed_pseudogene	Gm12202	ENSMUST00000121196	unprocessed_pseudogene		11	-1	51113200	811
ENSMUSG00000093768	processed_transcript	Gm20650	ENSMUST00000175690	processed_transcript		7	1	126891622	198
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000101677	protein_coding		6	-1	4747188	1656
ENSMUSG00000001774	protein_coding	Chordc1	ENSMUST00000217031	protein_coding		9	1	18292355	810
ENSMUSG00000106833	processed_pseudogene	Gm42739	ENSMUST00000200687	processed_pseudogene		6	1	127763748	226
ENSMUSG00000118444	lincRNA	Gm50477	ENSMUST00000238310	lincRNA		7	1	24288309	475
ENSMUSG00000029032	protein_coding	Arhgef16	ENSMUST00000129189	processed_transcript		4	-1	154287085	845
ENSMUSG00000001774	protein_coding	Chordc1	ENSMUST00000217083	nonsense_mediated_decay		9	1	18292388	647
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000115763	nonsense_mediated_decay		17	1	6673583	1310
ENSMUSG00000029032	protein_coding	Arhgef16	ENSMUST00000154895	protein_coding		4	-1	154299892	895
ENSMUSG00000118477	processed_pseudogene	Gm18126	ENSMUST00000238397	processed_pseudogene		7	-1	24288636	1321
ENSMUSG00000049680	protein_coding	Urgcp	ENSMUST00000093362	protein_coding	principal4	11	-1	5741150	5089
ENSMUSG00000083156	processed_pseudogene	Gm12201	ENSMUST00000120657	processed_pseudogene		11	1	51106631	1234
ENSMUSG00000026586	protein_coding	Prrx1	ENSMUST00000075805	protein_coding		1	-1	163313672	4986
ENSMUSG00000001774	protein_coding	Chordc1	ENSMUST00000216666	retained_intron		9	1	18304820	624
ENSMUSG00000091350	protein_coding	Vmn2r92	ENSMUST00000169686	protein_coding	principal1	17	1	18151887	6334
ENSMUSG00000060098	protein_coding	Prmt7	ENSMUST00000147063	retained_intron		8	1	106211037	2277
ENSMUSG00000029032	protein_coding	Arhgef16	ENSMUST00000152947	protein_coding		4	-1	154301676	664
ENSMUSG00000079604	lincRNA	Gm13219	ENSMUST00000152599	lincRNA		2	1	9352431	685
ENSMUSG00000001774	protein_coding	Chordc1	ENSMUST00000215421	retained_intron		9	1	18305201	487
ENSMUSG00000060538	protein_coding	Tmem219	ENSMUST00000154174	protein_coding		7	-1	126891756	299
ENSMUSG00000060098	protein_coding	Prmt7	ENSMUST00000109296	protein_coding		8	1	106211218	747
ENSMUSG00000060098	protein_coding	Prmt7	ENSMUST00000128201	protein_coding		8	1	106212526	1535
ENSMUSG00000029032	protein_coding	Arhgef16	ENSMUST00000169623	protein_coding	principal1	4	-1	154301663	2474
ENSMUSG00000060098	protein_coding	Prmt7	ENSMUST00000153272	processed_transcript		8	1	106234525	851
ENSMUSG00000023439	protein_coding	Gnb3	ENSMUST00000129251	retained_intron		6	-1	124839957	1779
ENSMUSG00000042340	protein_coding	Ctf1	ENSMUST00000047393	protein_coding	principal1	7	1	127712736	1352
ENSMUSG00000079604	lincRNA	Gm13219	ENSMUST00000144870	lincRNA		2	1	9352490	3019
ENSMUSG00000099429	lincRNA	1600019K03Rik	ENSMUST00000187829	lincRNA		16	-1	35509419	477
ENSMUSG00000017211	protein_coding	Gsdma2	ENSMUST00000093938	protein_coding	principal1	11	1	98646759	1673
ENSMUSG00000054263	protein_coding	Lifr	ENSMUST00000228723	protein_coding		15	1	7090614	577
ENSMUSG00000023439	protein_coding	Gnb3	ENSMUST00000140233	processed_transcript		6	-1	124836297	582
ENSMUSG00000098173	processed_pseudogene	Gm26923	ENSMUST00000182615	processed_pseudogene		10	-1	103582393	996
ENSMUSG00000060098	protein_coding	Prmt7	ENSMUST00000134151	processed_transcript		8	1	106237761	660
ENSMUSG00000029209	protein_coding	Gnpda2	ENSMUST00000139632	nonsense_mediated_decay		5	-1	69590792	1202
ENSMUSG00000023439	protein_coding	Gnb3	ENSMUST00000135996	retained_intron		6	-1	124840083	816
ENSMUSG00000042340	protein_coding	Ctf1	ENSMUST00000206997	protein_coding		7	1	127712937	528
ENSMUSG00000079604	lincRNA	Gm13219	ENSMUST00000154223	lincRNA		2	1	9352520	1843
ENSMUSG00000112554	lincRNA	Gm47224	ENSMUST00000218181	lincRNA		10	-1	103858332	456
ENSMUSG00000030092	protein_coding	Cntn6	ENSMUST00000089215	protein_coding	principal1	6	1	104492922	3702
ENSMUSG00000051499	protein_coding	Zfp786	ENSMUST00000058844	protein_coding	principal1	6	-1	47830867	3191
ENSMUSG00000108170	TEC	Gm43966	ENSMUST00000203301	TEC		6	-1	52713955	612
ENSMUSG00000042340	protein_coding	Ctf1	ENSMUST00000206506	protein_coding		7	1	127712944	784
ENSMUSG00000017211	protein_coding	Gsdma2	ENSMUST00000017355	protein_coding		11	1	98646763	1314
ENSMUSG00000047804	protein_coding	Akap10	ENSMUST00000102650	protein_coding	principal1	11	-1	61930252	3874
ENSMUSG00000028777	protein_coding	Gnat3	ENSMUST00000030561	protein_coding	principal1	5	1	17962549	1361
ENSMUSG00000026586	protein_coding	Prrx1	ENSMUST00000027878	protein_coding	principal1	1	-1	163313710	4952
ENSMUSG00000030092	protein_coding	Cntn6	ENSMUST00000161413	retained_intron		6	1	104493054	2928
ENSMUSG00000017211	protein_coding	Gsdma2	ENSMUST00000127692	processed_transcript		11	1	98646763	1030
ENSMUSG00000017211	protein_coding	Gsdma2	ENSMUST00000131549	processed_transcript		11	1	98646769	215
ENSMUSG00000042340	protein_coding	Ctf1	ENSMUST00000206073	processed_transcript		7	1	127713300	450
ENSMUSG00000042340	protein_coding	Ctf1	ENSMUST00000205655	processed_transcript		7	1	127713557	285
ENSMUSG00000047804	protein_coding	Akap10	ENSMUST00000137323	processed_transcript		11	-1	61878450	1923
ENSMUSG00000051499	protein_coding	Zfp786	ENSMUST00000143979	processed_transcript		6	-1	47830568	405
ENSMUSG00000110977	unprocessed_pseudogene	Gm48598	ENSMUST00000216651	unprocessed_pseudogene		7	-1	8850615	300
ENSMUSG00000017211	protein_coding	Gsdma2	ENSMUST00000138686	processed_transcript		11	1	98646775	758
ENSMUSG00000024899	protein_coding	Papss2	ENSMUST00000235594	protein_coding	principal1	19	1	32595790	2047
ENSMUSG00000030092	protein_coding	Cntn6	ENSMUST00000162872	protein_coding	principal1	6	1	104493248	3467
ENSMUSG00000051499	protein_coding	Zfp786	ENSMUST00000204984	retained_intron		6	-1	47830504	2339
ENSMUSG00000047804	protein_coding	Akap10	ENSMUST00000058173	protein_coding		11	-1	61916218	2015
ENSMUSG00000017211	protein_coding	Gsdma2	ENSMUST00000136111	processed_transcript		11	1	98650659	435
ENSMUSG00000026586	protein_coding	Prrx1	ENSMUST00000183691	processed_transcript		1	-1	163289224	1335
ENSMUSG00000049680	protein_coding	Urgcp	ENSMUST00000120306	protein_coding	alternative2	11	-1	5762371	3972
ENSMUSG00000047804	protein_coding	Akap10	ENSMUST00000108710	protein_coding		11	-1	61930226	3394
ENSMUSG00000114771	lincRNA	Gm49064	ENSMUST00000225201	lincRNA		13	-1	67229969	1289
ENSMUSG00000047804	protein_coding	Akap10	ENSMUST00000143952	processed_transcript		11	-1	61930207	369
ENSMUSG00000101910	lincRNA	Gm28691	ENSMUST00000191561	lincRNA		Y	1	60335115	1493
ENSMUSG00000017211	protein_coding	Gsdma2	ENSMUST00000129186	processed_transcript		11	1	98651521	716
ENSMUSG00000045126	protein_coding	Olfr1445	ENSMUST00000049624	protein_coding	principal1	19	1	12883855	1001
ENSMUSG00000029209	protein_coding	Gnpda2	ENSMUST00000031117	protein_coding	principal3	5	-1	69592340	1894
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000153284	retained_intron		6	-1	4747157	1831
ENSMUSG00000049680	protein_coding	Urgcp	ENSMUST00000118076	protein_coding	alternative2	11	-1	5762376	4208
ENSMUSG00000024899	protein_coding	Papss2	ENSMUST00000236290	protein_coding		19	1	32620005	3618
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000128109	retained_intron		6	-1	4747080	2212
ENSMUSG00000101910	lincRNA	Gm28691	ENSMUST00000189401	lincRNA		Y	1	60335568	431
ENSMUSG00000030350	protein_coding	Prmt8	ENSMUST00000032500	protein_coding	principal1	6	-1	127769472	2724
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000139029	processed_transcript		6	-1	4747070	821
ENSMUSG00000111251	processed_pseudogene	Gm18671	ENSMUST00000214826	processed_pseudogene		10	1	40548892	683
ENSMUSG00000042359	protein_coding	Osbpl6	ENSMUST00000133275	processed_transcript		2	1	76406508	593
ENSMUSG00000049680	protein_coding	Urgcp	ENSMUST00000140922	protein_coding		11	-1	5741146	394
ENSMUSG00000111108	processed_pseudogene	Gm17795	ENSMUST00000214505	processed_pseudogene		10	-1	40566672	757
ENSMUSG00000056999	protein_coding	Ide	ENSMUST00000131070	protein_coding	principal1	19	-1	37330613	4962
ENSMUSG00000058904	protein_coding	Olfr1413	ENSMUST00000214239	protein_coding	principal1	1	1	92571322	1724
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000123907	nonsense_mediated_decay		6	-1	4747063	936
ENSMUSG00000106905	TEC	Gm42741	ENSMUST00000201340	TEC		6	-1	127774650	2278
ENSMUSG00000074887	lincRNA	EU599041	ENSMUST00000205748	lincRNA		7	1	43214039	1492
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000203556	retained_intron		6	-1	4712028	4416
ENSMUSG00000074887	lincRNA	EU599041	ENSMUST00000206405	lincRNA		7	1	43214039	1428
ENSMUSG00000024899	protein_coding	Papss2	ENSMUST00000025833	protein_coding		19	1	32620005	3635
ENSMUSG00000026586	protein_coding	Prrx1	ENSMUST00000174397	protein_coding		1	-1	163313668	6527
ENSMUSG00000004631	protein_coding	Sgce	ENSMUST00000204897	retained_intron		6	-1	4740207	3066
ENSMUSG00000058904	protein_coding	Olfr1413	ENSMUST00000074859	protein_coding	principal1	1	1	92573125	1082
ENSMUSG00000107253	lincRNA	Gm43634	ENSMUST00000202671	lincRNA		6	1	127644440	675
ENSMUSG00000096576	protein_coding	Oog1	ENSMUST00000222112	protein_coding	alternative2	12	1	87602688	2451
ENSMUSG00000100579	lincRNA	Gm28692	ENSMUST00000189645	lincRNA		Y	1	60364506	621
ENSMUSG00000060034	protein_coding	Ctf2	ENSMUST00000076091	protein_coding	principal2	7	-1	127725616	1754
ENSMUSG00000100579	lincRNA	Gm28692	ENSMUST00000186318	lincRNA		Y	1	60364506	437
ENSMUSG00000049680	protein_coding	Urgcp	ENSMUST00000170116	protein_coding	alternative2	11	-1	5762376	5528
ENSMUSG00000026586	protein_coding	Prrx1	ENSMUST00000174098	retained_intron		1	-1	163313671	2411
ENSMUSG00000074887	lincRNA	EU599041	ENSMUST00000205291	lincRNA		7	1	43214057	1386
ENSMUSG00000090417	protein_coding	Vmn2r94	ENSMUST00000172190	protein_coding	principal1	17	-1	18277756	5153
ENSMUSG00000097001	antisense	1700054K02Rik	ENSMUST00000181755	antisense		1	-1	92572749	376
ENSMUSG00000020935	protein_coding	Dcakd	ENSMUST00000021313	protein_coding	principal1	11	-1	103017168	1744
ENSMUSG00000074887	lincRNA	EU599041	ENSMUST00000163106	lincRNA		7	1	43223575	810
ENSMUSG00000060034	protein_coding	Ctf2	ENSMUST00000206038	protein_coding	alternative2	7	-1	127732166	1825
ENSMUSG00000029209	protein_coding	Gnpda2	ENSMUST00000166298	protein_coding	alternative1	5	-1	69590828	1755
ENSMUSG00000099363	unprocessed_pseudogene	Gm28478	ENSMUST00000185802	unprocessed_pseudogene		1	1	92574614	183
ENSMUSG00000092188	antisense	Gm20471	ENSMUST00000172793	antisense		1	1	163280356	626
ENSMUSG00000049680	protein_coding	Urgcp	ENSMUST00000053427	protein_coding	alternative2	11	-1	5762376	5527
ENSMUSG00000090417	protein_coding	Vmn2r94	ENSMUST00000231815	protein_coding		17	-1	18277756	9423
ENSMUSG00000103195	TEC	Gm37644	ENSMUST00000192190	TEC		1	-1	163309067	2270
ENSMUSG00000020935	protein_coding	Dcakd	ENSMUST00000134335	retained_intron		11	-1	102997548	1320
ENSMUSG00000090417	protein_coding	Vmn2r94	ENSMUST00000231457	nonsense_mediated_decay		17	-1	18277756	5538
ENSMUSG00000093804	protein_coding	Olfr1303	ENSMUST00000216114	protein_coding	principal1	2	-1	111820340	2976
ENSMUSG00000090417	protein_coding	Vmn2r94	ENSMUST00000231390	retained_intron		17	-1	18277756	3783
ENSMUSG00000096576	protein_coding	Oog1	ENSMUST00000095509	protein_coding	principal2	12	1	87602695	1801
ENSMUSG00000093804	protein_coding	Olfr1303	ENSMUST00000099609	protein_coding	principal1	2	-1	111814724	939
ENSMUSG00000080764	processed_pseudogene	Gm14606	ENSMUST00000117078	processed_pseudogene		X	-1	45404845	1155
ENSMUSG00000020935	protein_coding	Dcakd	ENSMUST00000155490	protein_coding		11	-1	103028304	729
ENSMUSG00000056999	protein_coding	Ide	ENSMUST00000154339	processed_transcript		19	-1	37307392	2001
ENSMUSG00000092584	unprocessed_pseudogene	Gm18199	ENSMUST00000173820	unprocessed_pseudogene		7	-1	9523828	835
ENSMUSG00000112570	processed_pseudogene	Gm47225	ENSMUST00000220325	processed_pseudogene		10	1	103893538	269
ENSMUSG00000029209	protein_coding	Gnpda2	ENSMUST00000154018	retained_intron		5	-1	69592246	6251
ENSMUSG00000109423	unprocessed_pseudogene	Olfr1304-ps1	ENSMUST00000208032	unprocessed_pseudogene		2	-1	111823416	189
ENSMUSG00000056999	protein_coding	Ide	ENSMUST00000134740	retained_intron		19	-1	37290878	814
ENSMUSG00000112281	lincRNA	Gm47226	ENSMUST00000218778	lincRNA		10	1	103986993	818
ENSMUSG00000020935	protein_coding	Dcakd	ENSMUST00000152965	retained_intron		11	-1	103028263	549
ENSMUSG00000101466	unprocessed_pseudogene	Gm29548	ENSMUST00000187012	unprocessed_pseudogene		Y	-1	62604456	694
ENSMUSG00000096576	protein_coding	Oog1	ENSMUST00000222332	protein_coding	alternative2	12	1	87602717	1464
ENSMUSG00000031906	protein_coding	Smpd3	ENSMUST00000067512	protein_coding	principal1	8	-1	106337988	5148
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000037739	protein_coding	principal1	14	-1	31019152	1947
ENSMUSG00000081129	processed_pseudogene	Gm14605	ENSMUST00000120599	processed_pseudogene		X	-1	45498874	268
ENSMUSG00000083059	unprocessed_pseudogene	Olfr268-ps1	ENSMUST00000121395	unprocessed_pseudogene		2	-1	111851838	945
ENSMUSG00000020935	protein_coding	Dcakd	ENSMUST00000126365	processed_transcript		11	-1	103028333	430
ENSMUSG00000112403	processed_pseudogene	Gm47227	ENSMUST00000217869	processed_pseudogene		10	1	104082225	117
ENSMUSG00000112382	processed_pseudogene	Gm47228	ENSMUST00000218668	processed_pseudogene		10	-1	104096761	439
ENSMUSG00000031906	protein_coding	Smpd3	ENSMUST00000212896	protein_coding	principal1	8	-1	106280978	2626
ENSMUSG00000029209	protein_coding	Gnpda2	ENSMUST00000173927	protein_coding	alternative1	5	-1	69592274	1011
ENSMUSG00000096294	protein_coding	Gm10302	ENSMUST00000174433	protein_coding	principal1	7	-1	9572288	3535
ENSMUSG00000056999	protein_coding	Ide	ENSMUST00000150707	processed_transcript		19	-1	37313573	2368
ENSMUSG00000096530	protein_coding	Gm11758	ENSMUST00000107327	protein_coding	principal2	4	-1	73876266	1325
ENSMUSG00000029209	protein_coding	Gnpda2	ENSMUST00000120789	protein_coding		5	-1	69592293	1594
ENSMUSG00000034462	protein_coding	Pkd2	ENSMUST00000086831	protein_coding	principal1	5	1	104459450	5219
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000227869	retained_intron		14	-1	31013554	1033
ENSMUSG00000096530	protein_coding	Gm11758	ENSMUST00000107326	protein_coding	alternative2	4	-1	73876266	936
ENSMUSG00000029209	protein_coding	Gnpda2	ENSMUST00000153536	nonsense_mediated_decay		5	-1	69592289	628
ENSMUSG00000101614	lincRNA	Gm29547	ENSMUST00000187258	lincRNA		Y	1	62648296	1499
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000228713	retained_intron		14	-1	31013616	718
ENSMUSG00000056999	protein_coding	Ide	ENSMUST00000154308	retained_intron		19	-1	37337852	1723
ENSMUSG00000101614	lincRNA	Gm29547	ENSMUST00000187635	lincRNA		Y	1	62648749	438
ENSMUSG00000030105	protein_coding	Arl8b	ENSMUST00000032196	protein_coding	principal1	6	1	108783099	4443
ENSMUSG00000001588	protein_coding	Acap1	ENSMUST00000001631	protein_coding	principal1	11	-1	69895539	2482
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000226379	protein_coding		14	-1	31013755	597
ENSMUSG00000061414	protein_coding	Cracr2a	ENSMUST00000212051	protein_coding	principal1	6	1	127561338	7625
ENSMUSG00000100307	unprocessed_pseudogene	Gm29546	ENSMUST00000191171	unprocessed_pseudogene		Y	1	62717008	678
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000226220	retained_intron		14	-1	31014306	508
ENSMUSG00000030105	protein_coding	Arl8b	ENSMUST00000204483	protein_coding		6	1	108794897	695
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000144612	lincRNA		6	1	31220351	450
ENSMUSG00000031447	protein_coding	Lamp1	ENSMUST00000033824	protein_coding	principal1	8	1	13159161	2229
ENSMUSG00000001588	protein_coding	Acap1	ENSMUST00000127238	processed_transcript		11	-1	69888417	2973
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000003857	protein_coding	principal1	7	-1	27356019	2358
ENSMUSG00000096293	unprocessed_pseudogene	Gm3683	ENSMUST00000175701	unprocessed_pseudogene		7	-1	9658337	2513
ENSMUSG00000118208	processed_pseudogene	Gm50234	ENSMUST00000237991	processed_pseudogene		18	-1	65715390	342
ENSMUSG00000001588	protein_coding	Acap1	ENSMUST00000148037	processed_transcript		11	-1	69890491	878
ENSMUSG00000031447	protein_coding	Lamp1	ENSMUST00000209709	retained_intron		8	1	13173181	618
ENSMUSG00000061414	protein_coding	Cracr2a	ENSMUST00000201303	retained_intron		6	1	127577897	1267
ENSMUSG00000118263	antisense	Gm42064	ENSMUST00000235862	antisense		19	-1	5307159	499
ENSMUSG00000118263	antisense	Gm42064	ENSMUST00000235637	antisense		19	-1	5307416	405
ENSMUSG00000079698	protein_coding	Vmn2r93	ENSMUST00000231938	protein_coding		17	1	18298099	4499
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000228427	retained_intron		14	-1	31017156	1360
ENSMUSG00000061414	protein_coding	Cracr2a	ENSMUST00000071563	protein_coding		6	1	127577975	1094
ENSMUSG00000040729	protein_coding	Cep126	ENSMUST00000238782	nonsense_mediated_decay		9	-1	8134294	4955
ENSMUSG00000054247	bidirectional_promoter_lncRNA	Gm9939	ENSMUST00000210603	bidirectional_promoter_lncRNA		8	1	34965903	457
ENSMUSG00000025880	protein_coding	Smad7	ENSMUST00000026999	protein_coding	principal1	18	1	75367529	4278
ENSMUSG00000054247	bidirectional_promoter_lncRNA	Gm9939	ENSMUST00000210951	bidirectional_promoter_lncRNA		8	1	34966433	834
ENSMUSG00000079698	protein_coding	Vmn2r93	ENSMUST00000079206	protein_coding	principal1	17	1	18298099	8229
ENSMUSG00000107042	TEC	4921513H07Rik	ENSMUST00000201403	TEC		6	-1	127778321	2238
ENSMUSG00000054247	bidirectional_promoter_lncRNA	Gm9939	ENSMUST00000067161	pseudogene		8	1	34965052	1154
ENSMUSG00000079698	protein_coding	Vmn2r93	ENSMUST00000231879	protein_coding		17	1	18298099	8218
ENSMUSG00000107219	antisense	Gm42738	ENSMUST00000201813	antisense		6	1	127767542	439
ENSMUSG00000025880	protein_coding	Smad7	ENSMUST00000174843	protein_coding		18	1	75368990	793
ENSMUSG00000045751	protein_coding	Mms22l	ENSMUST00000173079	retained_intron		4	1	24496451	3224
ENSMUSG00000052428	protein_coding	Tmco1	ENSMUST00000195015	protein_coding	principal1	1	1	167308378	1573
ENSMUSG00000107794	TEC	Gm44095	ENSMUST00000204631	TEC		6	1	92007550	1931
ENSMUSG00000034462	protein_coding	Pkd2	ENSMUST00000130931	processed_transcript		5	1	104459570	2282
ENSMUSG00000025880	protein_coding	Smad7	ENSMUST00000174411	protein_coding		18	1	75369976	769
ENSMUSG00000103111	IG_V_pseudogene	Ighv6-1	ENSMUST00000193612	IG_V_pseudogene		12	-1	113603928	343
ENSMUSG00000046798	protein_coding	Cldn12	ENSMUST00000198303	processed_transcript		5	-1	5514912	349
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000228739	retained_intron		14	-1	31017167	693
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000227389	retained_intron		14	-1	31016930	1656
ENSMUSG00000087317	antisense	4930466I24Rik	ENSMUST00000144105	antisense		6	-1	92016117	2264
ENSMUSG00000047658	protein_coding	Gal3st3	ENSMUST00000061169	protein_coding	principal1	19	1	5298331	2421
ENSMUSG00000025880	protein_coding	Smad7	ENSMUST00000172718	processed_transcript		18	1	75374914	392
ENSMUSG00000052428	protein_coding	Tmco1	ENSMUST00000193446	protein_coding		1	1	167308670	1122
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000228774	retained_intron		14	-1	31019093	2264
ENSMUSG00000072905	protein_coding	Gm2016	ENSMUST00000110147	protein_coding	principal1	12	1	87874072	1766
ENSMUSG00000034462	protein_coding	Pkd2	ENSMUST00000133540	retained_intron		5	1	104492771	5130
ENSMUSG00000052428	protein_coding	Tmco1	ENSMUST00000097473	nonsense_mediated_decay		1	1	167308736	3966
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000228341	protein_coding		14	-1	31018989	516
ENSMUSG00000046798	protein_coding	Cldn12	ENSMUST00000060947	protein_coding	principal1	5	-1	5514873	3597
ENSMUSG00000116102	processed_pseudogene	Gm20082	ENSMUST00000230053	processed_pseudogene		16	1	15871829	331
ENSMUSG00000052428	protein_coding	Tmco1	ENSMUST00000193101	protein_coding		1	1	167314137	600
ENSMUSG00000025880	protein_coding	Smad7	ENSMUST00000168918	protein_coding	principal1	18	1	75368883	1882
ENSMUSG00000101882	transcribed_unprocessed_pseudogene	Gm29545	ENSMUST00000188878	transcribed_unprocessed_pseudogene		Y	-1	62802915	694
ENSMUSG00000091779	protein_coding	Gm21293	ENSMUST00000181634	protein_coding	principal1	10	1	104142987	1246
ENSMUSG00000004535	protein_coding	Tax1bp1	ENSMUST00000080723	protein_coding	principal1	6	1	52713729	3285
ENSMUSG00000114101	processed_pseudogene	Gm48152	ENSMUST00000222851	processed_pseudogene		12	1	87786283	661
ENSMUSG00000091779	protein_coding	Gm21293	ENSMUST00000180664	protein_coding	principal1	10	1	104143402	1185
ENSMUSG00000103599	TEC	Gm37356	ENSMUST00000193362	TEC		2	1	13012624	1613
ENSMUSG00000113951	protein_coding	Gm2001	ENSMUST00000223236	protein_coding	principal1	12	-1	87842339	503
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000227087	processed_transcript		14	-1	31019013	466
ENSMUSG00000103143	TEC	Gm37742	ENSMUST00000193263	TEC		2	1	13036126	3979
ENSMUSG00000113280	processed_pseudogene	Gm21559	ENSMUST00000220638	processed_pseudogene		12	-1	87766303	855
ENSMUSG00000004535	protein_coding	Tax1bp1	ENSMUST00000149588	protein_coding		6	1	52713750	630
ENSMUSG00000046798	protein_coding	Cldn12	ENSMUST00000115446	protein_coding	principal1	5	-1	5514825	3519
ENSMUSG00000091779	protein_coding	Gm21293	ENSMUST00000170919	protein_coding		10	1	104144317	864
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000227467	protein_coding		14	-1	31017897	494
ENSMUSG00000099585	processed_pseudogene	Gm29544	ENSMUST00000188860	processed_pseudogene		Y	-1	62839509	313
ENSMUSG00000040729	protein_coding	Cep126	ENSMUST00000037397	protein_coding	principal1	9	-1	8134294	3819
ENSMUSG00000004535	protein_coding	Tax1bp1	ENSMUST00000128173	retained_intron		6	1	52713763	2628
ENSMUSG00000097427	protein_coding	Gm6763	ENSMUST00000181287	protein_coding	principal1	10	1	104151497	1246
ENSMUSG00000086837	antisense	Gm16618	ENSMUST00000134992	antisense		16	-1	20517766	955
ENSMUSG00000042354	protein_coding	Gnl3	ENSMUST00000227170	retained_intron		14	-1	31019044	666
ENSMUSG00000004535	protein_coding	Tax1bp1	ENSMUST00000138040	protein_coding		6	1	52714219	936
ENSMUSG00000102384	processed_transcript	Gm38143	ENSMUST00000191751	processed_transcript		7	1	73948423	644
ENSMUSG00000097427	protein_coding	Gm6763	ENSMUST00000180692	protein_coding		10	1	104151912	509
ENSMUSG00000092019	protein_coding	Gm4027	ENSMUST00000164838	protein_coding	principal1	12	1	87618869	1850
ENSMUSG00000046798	protein_coding	Cldn12	ENSMUST00000115445	protein_coding	principal1	5	-1	5514730	3477
ENSMUSG00000108375	TEC	Gm45003	ENSMUST00000205875	TEC		7	-1	73947534	2158
ENSMUSG00000040729	protein_coding	Cep126	ENSMUST00000217241	processed_transcript		9	-1	8087299	792
ENSMUSG00000060538	protein_coding	Tmem219	ENSMUST00000120007	protein_coding		7	-1	126897424	1087
ENSMUSG00000004535	protein_coding	Tax1bp1	ENSMUST00000129660	protein_coding		6	1	52714350	371
ENSMUSG00000040729	protein_coding	Cep126	ENSMUST00000214150	retained_intron		9	-1	8099890	685
ENSMUSG00000113025	processed_pseudogene	Gm49363	ENSMUST00000221668	processed_pseudogene		12	1	87889167	474
ENSMUSG00000113991	processed_pseudogene	Gm48151	ENSMUST00000221697	processed_pseudogene		12	1	87827710	409
ENSMUSG00000101668	lincRNA	Gm29549	ENSMUST00000189569	lincRNA		Y	1	62878705	1497
ENSMUSG00000114059	processed_pseudogene	Gm48153	ENSMUST00000221055	processed_pseudogene		12	1	87629993	409
ENSMUSG00000067909	protein_coding	Slxl1	ENSMUST00000088740	protein_coding	principal1	X	1	55226876	730
ENSMUSG00000004535	protein_coding	Tax1bp1	ENSMUST00000147513	processed_transcript		6	1	52740877	594
ENSMUSG00000113129	processed_pseudogene	Gm21569	ENSMUST00000222683	processed_pseudogene		12	-1	87771954	2036
ENSMUSG00000004535	protein_coding	Tax1bp1	ENSMUST00000149586	retained_intron		6	1	52757475	4249
ENSMUSG00000101668	lincRNA	Gm29549	ENSMUST00000188732	lincRNA		Y	1	62879157	437
ENSMUSG00000112949	processed_pseudogene	Gm21939	ENSMUST00000221137	processed_pseudogene		12	1	87781143	2773
ENSMUSG00000046798	protein_coding	Cldn12	ENSMUST00000125110	protein_coding		5	-1	5514789	359
ENSMUSG00000108036	processed_pseudogene	Gm43967	ENSMUST00000203787	processed_pseudogene		6	-1	52722930	301
ENSMUSG00000114074	processed_pseudogene	Gm48150	ENSMUST00000221896	processed_pseudogene		12	-1	87764316	358
ENSMUSG00000046798	protein_coding	Cldn12	ENSMUST00000134931	processed_transcript		5	-1	5514958	357
ENSMUSG00000101182	lincRNA	Gm29209	ENSMUST00000188176	lincRNA		Y	-1	62885362	457
ENSMUSG00000094317	unprocessed_pseudogene	Gm6660	ENSMUST00000179149	unprocessed_pseudogene		X	1	55311386	468
ENSMUSG00000118500	processed_pseudogene	AC211878.1	ENSMUST00000239045	processed_pseudogene		12	1	87761121	322
ENSMUSG00000083312	unprocessed_pseudogene	Olfr1374-ps1	ENSMUST00000120114	unprocessed_pseudogene		11	1	51142532	936
ENSMUSG00000046798	protein_coding	Cldn12	ENSMUST00000134157	processed_transcript		5	-1	5514449	248
ENSMUSG00000099578	processed_pseudogene	Gm5731	ENSMUST00000190969	processed_pseudogene		7	1	33423670	481
ENSMUSG00000113127	processed_pseudogene	Gm48154	ENSMUST00000222486	processed_pseudogene		12	1	87808537	488
ENSMUSG00000118009	processed_pseudogene	Gm50208	ENSMUST00000237016	processed_pseudogene		19	1	5321606	193
ENSMUSG00000020708	protein_coding	Psmc5	ENSMUST00000021049	protein_coding	principal1	11	1	106256154	1316
ENSMUSG00000049957	protein_coding	Ccdc137	ENSMUST00000058370	protein_coding	principal1	11	1	120458115	2778
ENSMUSG00000081296	processed_pseudogene	Gm12203	ENSMUST00000118235	processed_pseudogene		11	-1	51175822	598
ENSMUSG00000015966	protein_coding	Il17rb	ENSMUST00000122205	protein_coding	alternative2	14	-1	30008896	2094
ENSMUSG00000101975	unprocessed_pseudogene	Scgb1b34-ps	ENSMUST00000187959	unprocessed_pseudogene		7	-1	33444811	331
ENSMUSG00000046798	protein_coding	Cldn12	ENSMUST00000179804	protein_coding	principal1	5	-1	5514789	3752
ENSMUSG00000113206	processed_pseudogene	Gm3742	ENSMUST00000220907	processed_pseudogene		12	-1	87643442	1391
ENSMUSG00000113971	protein_coding	Gm2022	ENSMUST00000220585	protein_coding	principal1	12	1	87895370	435
ENSMUSG00000089984	protein_coding	Fbxo24	ENSMUST00000031732	protein_coding	principal1	5	-1	137625078	2161
ENSMUSG00000113912	processed_pseudogene	Gm21937	ENSMUST00000222825	processed_pseudogene		12	1	87759158	218
ENSMUSG00000020708	protein_coding	Psmc5	ENSMUST00000133131	nonsense_mediated_decay		11	1	106256154	1394
ENSMUSG00000093519	unprocessed_pseudogene	Gm20345	ENSMUST00000175839	unprocessed_pseudogene		7	-1	9701998	2414
ENSMUSG00000049957	protein_coding	Ccdc137	ENSMUST00000150400	processed_transcript		11	1	120458126	701
ENSMUSG00000113815	processed_pseudogene	Gm48149	ENSMUST00000220970	processed_pseudogene		12	1	87796883	262
ENSMUSG00000096127	unprocessed_pseudogene	Gm14625	ENSMUST00000180231	unprocessed_pseudogene		X	1	55431819	468
ENSMUSG00000049957	protein_coding	Ccdc137	ENSMUST00000140308	retained_intron		11	1	120458138	375
ENSMUSG00000117807	processed_pseudogene	Gm7074	ENSMUST00000235792	processed_pseudogene		19	1	5324014	1454
ENSMUSG00000113286	processed_pseudogene	Gm18627	ENSMUST00000222629	processed_pseudogene		12	1	87865785	2018
ENSMUSG00000060538	protein_coding	Tmem219	ENSMUST00000137875	retained_intron		7	-1	126889303	509
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000159394	nonsense_mediated_decay		17	1	6673610	2244
ENSMUSG00000060538	protein_coding	Tmem219	ENSMUST00000121532	protein_coding	principal1	7	-1	126898253	915
ENSMUSG00000113011	processed_pseudogene	Gm1995	ENSMUST00000220838	processed_pseudogene		12	1	87861366	2602
ENSMUSG00000109661	processed_pseudogene	Gm3690	ENSMUST00000211341	processed_pseudogene		7	-1	9714485	262
ENSMUSG00000091631	protein_coding	Vmn2r95	ENSMUST00000166327	protein_coding		17	1	18424078	11130
ENSMUSG00000049957	protein_coding	Ccdc137	ENSMUST00000175970	protein_coding		11	1	120458142	336
ENSMUSG00000113201	protein_coding	Gm21936	ENSMUST00000221442	protein_coding	principal1	12	1	87795512	435
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000162635	nonsense_mediated_decay		17	1	6673610	2021
ENSMUSG00000091631	protein_coding	Vmn2r95	ENSMUST00000232464	protein_coding	alternative2	17	1	18424078	10873
ENSMUSG00000113685	processed_pseudogene	Gm21038	ENSMUST00000222205	processed_pseudogene		12	-1	87841162	1383
ENSMUSG00000049957	protein_coding	Ccdc137	ENSMUST00000176120	protein_coding		11	1	120458147	724
ENSMUSG00000100360	unprocessed_pseudogene	Gm28649	ENSMUST00000189153	unprocessed_pseudogene		Y	-1	3853545	1581
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000232151	retained_intron		17	1	6675921	649
ENSMUSG00000089984	protein_coding	Fbxo24	ENSMUST00000111002	protein_coding		5	-1	137629002	2306
ENSMUSG00000091631	protein_coding	Vmn2r95	ENSMUST00000232090	protein_coding	principal2	17	1	18424078	11145
ENSMUSG00000049957	protein_coding	Ccdc137	ENSMUST00000176717	processed_transcript		11	1	120458186	424
ENSMUSG00000085839	antisense	Gm15949	ENSMUST00000129485	antisense		5	-1	66985641	126
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000231743	processed_transcript		17	1	6689072	1720
ENSMUSG00000099838	unprocessed_pseudogene	Gm8521	ENSMUST00000190394	unprocessed_pseudogene		Y	1	3859067	606
ENSMUSG00000106749	TEC	Gm43281	ENSMUST00000202522	TEC		5	1	66916008	2704
ENSMUSG00000015966	protein_coding	Il17rb	ENSMUST00000135888	nonsense_mediated_decay		14	-1	30008813	2009
ENSMUSG00000060538	protein_coding	Tmem219	ENSMUST00000032926	protein_coding	principal1	7	-1	126898276	941
ENSMUSG00000117305	processed_pseudogene	Gm49963	ENSMUST00000233112	processed_pseudogene		17	-1	18476654	123
ENSMUSG00000089984	protein_coding	Fbxo24	ENSMUST00000136028	nonsense_mediated_decay		5	-1	137628956	1649
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000161118	retained_intron		17	1	6705830	1406
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000232362	retained_intron		17	1	6705830	1296
ENSMUSG00000086964	antisense	Gm15948	ENSMUST00000150616	antisense		5	-1	66991207	403
ENSMUSG00000093775	unprocessed_pseudogene	Vmn2r-ps114	ENSMUST00000177016	unprocessed_pseudogene		17	1	18493751	773
ENSMUSG00000081228	processed_pseudogene	Gm16089	ENSMUST00000117679	processed_pseudogene		5	1	137615627	336
ENSMUSG00000079031	protein_coding	BB287469	ENSMUST00000110149	protein_coding	principal1	12	1	87816577	1851
ENSMUSG00000049957	protein_coding	Ccdc137	ENSMUST00000145702	retained_intron		11	1	120459801	1074
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000160771	retained_intron		17	1	6708482	1455
ENSMUSG00000106617	antisense	Gm36266	ENSMUST00000196660	antisense		5	1	137612852	1749
ENSMUSG00000015966	protein_coding	Il17rb	ENSMUST00000136726	nonsense_mediated_decay		14	-1	30008809	2575
ENSMUSG00000049957	protein_coding	Ccdc137	ENSMUST00000148849	processed_transcript		11	1	120462466	408
ENSMUSG00000015966	protein_coding	Il17rb	ENSMUST00000223643	processed_transcript		14	-1	30000094	1533
ENSMUSG00000025789	protein_coding	St8sia2	ENSMUST00000026896	protein_coding	principal1	7	-1	74013674	5368
ENSMUSG00000073678	protein_coding	Pgap1	ENSMUST00000097739	protein_coding	principal1	1	-1	54557682	10583
ENSMUSG00000113489	protein_coding	Gm16381	ENSMUST00000220528	protein_coding	principal1	12	-1	87644620	503
ENSMUSG00000015966	protein_coding	Il17rb	ENSMUST00000225746	retained_intron		14	-1	29998459	721
ENSMUSG00000034442	protein_coding	Trmt5	ENSMUST00000116420	protein_coding	principal1	12	-1	73286709	2066
ENSMUSG00000025789	protein_coding	St8sia2	ENSMUST00000191970	protein_coding		7	-1	74013690	816
ENSMUSG00000060538	protein_coding	Tmem219	ENSMUST00000119781	protein_coding		7	-1	126922915	1118
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000150192	processed_transcript		7	1	142434850	503
ENSMUSG00000034442	protein_coding	Trmt5	ENSMUST00000220701	protein_coding		12	-1	73282671	212
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000128481	processed_transcript		7	1	142434946	211
ENSMUSG00000060538	protein_coding	Tmem219	ENSMUST00000177004	protein_coding		7	-1	126896876	452
ENSMUSG00000034442	protein_coding	Trmt5	ENSMUST00000221189	protein_coding		12	-1	73286710	683
ENSMUSG00000073678	protein_coding	Pgap1	ENSMUST00000185817	retained_intron		1	-1	54557684	1408
ENSMUSG00000015966	protein_coding	Il17rb	ENSMUST00000016110	protein_coding	principal2	14	-1	30008896	2061
ENSMUSG00000060538	protein_coding	Tmem219	ENSMUST00000121612	protein_coding		7	-1	126922917	566
ENSMUSG00000073678	protein_coding	Pgap1	ENSMUST00000187949	retained_intron		1	-1	54529446	3247
ENSMUSG00000095724	protein_coding	Gm21319	ENSMUST00000164517	protein_coding	principal1	12	-1	87775755	1863
ENSMUSG00000041831	protein_coding	Sytl3	ENSMUST00000160483	protein_coding		17	1	6705830	1504
ENSMUSG00000073678	protein_coding	Pgap1	ENSMUST00000189506	retained_intron		1	-1	54557627	3025
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000143233	processed_transcript		11	-1	120467607	2206
ENSMUSG00000038515	protein_coding	Grtp1	ENSMUST00000209895	nonsense_mediated_decay		8	-1	13200587	1408
ENSMUSG00000104136	TEC	Gm36955	ENSMUST00000194316	TEC		1	-1	54520270	1661
ENSMUSG00000060538	protein_coding	Tmem219	ENSMUST00000145307	retained_intron		7	-1	126898281	1100
ENSMUSG00000091679	protein_coding	Vmn2r96	ENSMUST00000177244	protein_coding	principal1	17	1	18573151	6372
ENSMUSG00000091679	protein_coding	Vmn2r96	ENSMUST00000231261	nonsense_mediated_decay		17	1	18573151	6208
ENSMUSG00000046610	protein_coding	Oacyl	ENSMUST00000115097	protein_coding	principal2	18	1	65698268	3431
ENSMUSG00000060538	protein_coding	Tmem219	ENSMUST00000134134	protein_coding		7	-1	126922900	840
ENSMUSG00000091679	protein_coding	Vmn2r96	ENSMUST00000231286	nonsense_mediated_decay		17	1	18573151	6058
ENSMUSG00000104186	TEC	Gm37819	ENSMUST00000194626	TEC		3	1	49137463	1065
ENSMUSG00000107599	TEC	Gm43981	ENSMUST00000203285	TEC		6	1	82991645	1467
ENSMUSG00000107829	processed_pseudogene	Gm43985	ENSMUST00000203283	processed_pseudogene		6	-1	82991579	757
ENSMUSG00000046610	protein_coding	Oacyl	ENSMUST00000117694	protein_coding	alternative2	18	1	65698270	3274
ENSMUSG00000091679	protein_coding	Vmn2r96	ENSMUST00000165692	protein_coding		17	1	18581727	2343
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000132684	retained_intron		7	-1	27355743	2506
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000128755	retained_intron		5	-1	137611408	2573
ENSMUSG00000116385	processed_pseudogene	Gm18334	ENSMUST00000230117	processed_pseudogene		16	1	16099598	514
ENSMUSG00000046610	protein_coding	Oacyl	ENSMUST00000235962	protein_coding		18	1	65698284	595
ENSMUSG00000113931	processed_pseudogene	Gm5928	ENSMUST00000221839	processed_pseudogene		13	-1	12425605	466
ENSMUSG00000046610	protein_coding	Oacyl	ENSMUST00000134343	processed_transcript		18	1	65749014	565
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000201852	retained_intron		5	1	66745827	1018
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000123190	retained_intron		7	-1	27355954	2412
ENSMUSG00000050244	protein_coding	Heatr1	ENSMUST00000223324	protein_coding		13	1	12395027	193
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000148933	processed_transcript		7	-1	27345602	1140
ENSMUSG00000051735	protein_coding	Rinl	ENSMUST00000209035	protein_coding	principal1	7	1	28788969	2898
ENSMUSG00000097878	protein_coding	Gm8764	ENSMUST00000181179	protein_coding	principal1	10	1	104160006	1246
ENSMUSG00000031529	protein_coding	Tnks	ENSMUST00000033929	protein_coding	principal1	8	-1	34965690	9163
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000140638	retained_intron		7	-1	27342921	409
ENSMUSG00000051735	protein_coding	Rinl	ENSMUST00000207201	retained_intron		7	1	28788974	611
ENSMUSG00000039840	protein_coding	Epg5	ENSMUST00000044622	protein_coding	principal1	18	1	77938465	9660
ENSMUSG00000051735	protein_coding	Rinl	ENSMUST00000207462	protein_coding		7	1	28796938	748
ENSMUSG00000097878	protein_coding	Gm8764	ENSMUST00000181166	protein_coding		10	1	104160421	509
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000123149	lincRNA		6	1	31220351	766
ENSMUSG00000113211	processed_transcript	4921525O09Rik	ENSMUST00000220691	lincRNA		13	1	52096741	3270
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000143239	processed_transcript		7	-1	27348427	627
ENSMUSG00000113211	processed_transcript	4921525O09Rik	ENSMUST00000222527	retained_intron		13	1	52098542	867
ENSMUSG00000031529	protein_coding	Tnks	ENSMUST00000209632	protein_coding		8	-1	34838521	688
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000121758	protein_coding	principal3	7	-1	144738543	4552
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000132046	retained_intron		7	-1	27347454	803
ENSMUSG00000055480	protein_coding	Zfp458	ENSMUST00000045969	protein_coding	principal2	13	-1	67269068	3488
ENSMUSG00000051735	protein_coding	Rinl	ENSMUST00000208149	retained_intron		7	1	28796972	1535
ENSMUSG00000050244	protein_coding	Heatr1	ENSMUST00000222817	retained_intron		13	1	12395371	373
ENSMUSG00000051735	protein_coding	Rinl	ENSMUST00000207345	processed_transcript		7	1	28797898	489
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000152053	retained_intron		7	-1	27350609	640
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000238848	protein_coding		7	-1	144738566	4644
ENSMUSG00000037957	protein_coding	Wdr20	ENSMUST00000193053	protein_coding		12	1	110737944	1351
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000118556	protein_coding	alternative2	7	-1	144738566	4566
ENSMUSG00000113399	lincRNA	Gm48199	ENSMUST00000222876	lincRNA		13	1	52180411	496
ENSMUSG00000045205	protein_coding	Dpy19l4	ENSMUST00000139385	protein_coding		4	-1	11303361	5954
ENSMUSG00000051735	protein_coding	Rinl	ENSMUST00000059857	protein_coding	principal1	7	1	28788969	2871
ENSMUSG00000037957	protein_coding	Wdr20	ENSMUST00000192870	nonsense_mediated_decay		12	1	110737980	572
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000131571	retained_intron		7	-1	144608295	769
ENSMUSG00000037957	protein_coding	Wdr20	ENSMUST00000191983	retained_intron		12	1	110737989	2252
ENSMUSG00000030041	protein_coding	M1ap	ENSMUST00000113980	protein_coding	principal1	6	1	82946902	1945
ENSMUSG00000055480	protein_coding	Zfp458	ENSMUST00000225772	protein_coding	alternative2	13	-1	67278466	3485
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000124970	processed_transcript		11	-1	120467274	705
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000208094	processed_transcript		7	-1	144637161	551
ENSMUSG00000055480	protein_coding	Zfp458	ENSMUST00000223990	protein_coding		13	-1	67268464	688
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000208985	retained_intron		7	-1	144655667	1620
ENSMUSG00000030041	protein_coding	M1ap	ENSMUST00000204891	protein_coding		6	1	83026338	607
ENSMUSG00000052192	processed_pseudogene	Gm5963	ENSMUST00000143451	processed_pseudogene		16	-1	35573556	236
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000223931	processed_transcript		14	1	24487125	461
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000138449	retained_intron		7	-1	27355759	900
ENSMUSG00000030041	protein_coding	M1ap	ENSMUST00000144906	retained_intron		6	1	83028251	336
ENSMUSG00000031529	protein_coding	Tnks	ENSMUST00000209904	retained_intron		8	-1	34890151	3417
ENSMUSG00000055480	protein_coding	Zfp458	ENSMUST00000224648	retained_intron		13	-1	67269139	4615
ENSMUSG00000039840	protein_coding	Epg5	ENSMUST00000237997	processed_transcript		18	1	77955210	3149
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000152531	protein_coding		7	-1	144669380	1004
ENSMUSG00000107701	processed_pseudogene	Gm19287	ENSMUST00000203190	processed_pseudogene		6	1	82952780	358
ENSMUSG00000038515	protein_coding	Grtp1	ENSMUST00000210317	protein_coding	principal1	8	-1	13200620	3013
ENSMUSG00000031529	protein_coding	Tnks	ENSMUST00000210014	protein_coding		8	-1	34838989	878
ENSMUSG00000039840	protein_coding	Epg5	ENSMUST00000235433	retained_intron		18	1	78030189	573
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000136589	processed_transcript		7	-1	27355922	836
ENSMUSG00000037957	protein_coding	Wdr20	ENSMUST00000095410	protein_coding	principal1	12	1	110737992	2384
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000155175	protein_coding		7	-1	144751974	926
ENSMUSG00000031529	protein_coding	Tnks	ENSMUST00000210870	retained_intron		8	-1	34843019	5265
ENSMUSG00000052133	protein_coding	Sema5b	ENSMUST00000133554	retained_intron		16	1	35541145	2928
ENSMUSG00000089832	protein_coding	Shkbp1	ENSMUST00000157078	retained_intron		7	-1	27355771	752
ENSMUSG00000031529	protein_coding	Tnks	ENSMUST00000211065	processed_transcript		8	-1	34918768	295
ENSMUSG00000037957	protein_coding	Wdr20	ENSMUST00000191611	processed_transcript		12	1	110738018	373
ENSMUSG00000099900	protein_coding	Scgb2b21	ENSMUST00000185407	protein_coding	principal1	7	-1	33520458	520
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000141632	retained_intron		7	-1	144669377	450
ENSMUSG00000038515	protein_coding	Grtp1	ENSMUST00000165605	protein_coding		8	-1	13200535	1271
ENSMUSG00000038515	protein_coding	Grtp1	ENSMUST00000209691	protein_coding		8	-1	13200556	1030
ENSMUSG00000109717	lincRNA	Gm34368	ENSMUST00000209512	lincRNA		8	-1	34979874	1111
ENSMUSG00000021213	protein_coding	Akr1c13	ENSMUST00000021634	protein_coding	principal1	13	1	4191150	1262
ENSMUSG00000037957	protein_coding	Wdr20	ENSMUST00000195886	protein_coding		12	1	110738209	581
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000131731	protein_coding		7	-1	144678885	834
ENSMUSG00000038515	protein_coding	Grtp1	ENSMUST00000209516	nonsense_mediated_decay		8	-1	13179375	379
ENSMUSG00000095487	transcribed_unprocessed_pseudogene	Scgb1b21	ENSMUST00000182901	processed_transcript		7	1	33527376	278
ENSMUSG00000092367	protein_coding	Gm20479	ENSMUST00000126587	nonsense_mediated_decay	principal1	7	-1	27357419	556
ENSMUSG00000095487	transcribed_unprocessed_pseudogene	Scgb1b21	ENSMUST00000170232	transcribed_unprocessed_pseudogene		7	1	33527378	268
ENSMUSG00000037957	protein_coding	Wdr20	ENSMUST00000194118	processed_transcript		12	1	110794104	960
ENSMUSG00000083568	processed_pseudogene	Gm12770	ENSMUST00000121734	processed_pseudogene		7	-1	33567714	462
ENSMUSG00000081155	processed_pseudogene	Gm12771	ENSMUST00000120246	processed_pseudogene		7	1	33568156	135
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000155345	lincRNA		6	1	31220351	1022
ENSMUSG00000038515	protein_coding	Grtp1	ENSMUST00000209465	retained_intron		8	-1	13192255	997
ENSMUSG00000042251	protein_coding	Pm20d1	ENSMUST00000112393	protein_coding	principal1	1	1	131797381	6900
ENSMUSG00000031075	protein_coding	Ano1	ENSMUST00000033393	protein_coding	alternative2	7	-1	144738592	4585
ENSMUSG00000042359	protein_coding	Osbpl6	ENSMUST00000111929	protein_coding	alternative1	2	1	76406538	8257
ENSMUSG00000038515	protein_coding	Grtp1	ENSMUST00000211128	protein_coding		8	-1	13200617	1416
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000151800	lincRNA		6	1	31220357	750
ENSMUSG00000040657	lincRNA	1700063H04Rik	ENSMUST00000043553	lincRNA		6	1	122391379	817
ENSMUSG00000042359	protein_coding	Osbpl6	ENSMUST00000111930	protein_coding		2	1	76406558	3853
ENSMUSG00000021213	protein_coding	Akr1c13	ENSMUST00000128892	nonsense_mediated_decay		13	1	4191184	934
ENSMUSG00000042359	protein_coding	Osbpl6	ENSMUST00000134213	processed_transcript		2	1	76406561	422
ENSMUSG00000042251	protein_coding	Pm20d1	ENSMUST00000048660	protein_coding	principal1	1	1	131797398	2305
ENSMUSG00000118448	unitary_pseudogene	Gm50492	ENSMUST00000238395	unitary_pseudogene		6	-1	122409075	2827
ENSMUSG00000073018	transcribed_unprocessed_pseudogene	Gm1070	ENSMUST00000114185	processed_transcript		6	1	71293765	2874
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000152157	lincRNA		6	1	31220405	490
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000139444	lincRNA		6	1	31220405	461
ENSMUSG00000073018	transcribed_unprocessed_pseudogene	Gm1070	ENSMUST00000238902	transcribed_unprocessed_pseudogene		6	1	71300125	582
ENSMUSG00000109509	processed_pseudogene	Rps12-ps4	ENSMUST00000208689	processed_pseudogene		7	-1	30485097	397
ENSMUSG00000042359	protein_coding	Osbpl6	ENSMUST00000128034	processed_transcript		2	1	76499097	1178
ENSMUSG00000042251	protein_coding	Pm20d1	ENSMUST00000152989	protein_coding		1	1	131812130	421
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000138606	lincRNA		6	1	31220422	482
ENSMUSG00000107749	TEC	Gm44321	ENSMUST00000204262	TEC		6	1	71276494	2855
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000146778	lincRNA		6	1	31220422	579
ENSMUSG00000021213	protein_coding	Akr1c13	ENSMUST00000140971	processed_transcript		13	1	4193858	308
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000153057	lincRNA		6	1	31220435	652
ENSMUSG00000042251	protein_coding	Pm20d1	ENSMUST00000132450	processed_transcript		1	1	131812168	152
ENSMUSG00000042359	protein_coding	Osbpl6	ENSMUST00000184442	nonsense_mediated_decay		2	1	76548340	2674
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000151076	lincRNA		6	1	31220441	539
ENSMUSG00000087416	lincRNA	Gm15906	ENSMUST00000124746	lincRNA		4	1	129135091	323
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000076921	protein_coding	principal1	11	-1	120467600	911
ENSMUSG00000066513	protein_coding	Klk1b4	ENSMUST00000077354	protein_coding	principal1	7	1	44207435	839
ENSMUSG00000042359	protein_coding	Osbpl6	ENSMUST00000124601	processed_transcript		2	1	76568120	501
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000136571	lincRNA		6	1	31220447	478
ENSMUSG00000111353	unprocessed_pseudogene	Gm19324	ENSMUST00000213229	unprocessed_pseudogene		9	1	8142541	1169
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000133510	lincRNA		6	1	31277848	429
ENSMUSG00000050215	protein_coding	Olfr70	ENSMUST00000055545	protein_coding	principal1	4	-1	43700807	2568
ENSMUSG00000100132	processed_pseudogene	Gm18177	ENSMUST00000188373	processed_pseudogene		Y	-1	3875928	404
ENSMUSG00000111845	processed_pseudogene	Gm7495	ENSMUST00000215099	processed_pseudogene		9	-1	8154186	426
ENSMUSG00000042359	protein_coding	Osbpl6	ENSMUST00000077972	protein_coding	principal3	2	1	76406538	8037
ENSMUSG00000108774	TEC	Gm45136	ENSMUST00000205793	TEC		7	-1	44157786	943
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000138653	lincRNA		6	1	31285004	417
ENSMUSG00000101030	processed_pseudogene	Gm28429	ENSMUST00000188521	processed_pseudogene		Y	1	3886204	363
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000201375	TEC		6	1	31292534	1133
ENSMUSG00000003233	protein_coding	Dvl3	ENSMUST00000003318	protein_coding	principal3	16	1	20516982	2519
ENSMUSG00000087380	processed_transcript	2210408F21Rik	ENSMUST00000124811	lincRNA		6	1	31321971	384
ENSMUSG00000034037	protein_coding	Fgd5	ENSMUST00000089334	protein_coding	principal2	6	1	91978878	6095
ENSMUSG00000100641	processed_pseudogene	Gm28413	ENSMUST00000189369	processed_pseudogene		Y	1	3905027	291
ENSMUSG00000108459	unprocessed_pseudogene	Gm44605	ENSMUST00000206892	unprocessed_pseudogene		7	-1	44204293	949
ENSMUSG00000031998	transcribed_processed_pseudogene	1700128F08Rik	ENSMUST00000034483	processed_transcript		9	1	8221889	1110
ENSMUSG00000103220	TEC	Gm37728	ENSMUST00000195025	TEC		6	-1	31147419	2292
ENSMUSG00000101145	processed_pseudogene	Gm28412	ENSMUST00000187243	processed_pseudogene		Y	1	3909381	177
ENSMUSG00000031998	transcribed_processed_pseudogene	1700128F08Rik	ENSMUST00000213708	transcribed_processed_pseudogene		9	1	8221970	717
ENSMUSG00000100656	processed_pseudogene	Gm8525	ENSMUST00000189674	processed_pseudogene		Y	-1	3949713	861
ENSMUSG00000003233	protein_coding	Dvl3	ENSMUST00000171572	protein_coding	alternative1	16	1	20517064	3983
ENSMUSG00000021916	protein_coding	Glt8d1	ENSMUST00000168584	protein_coding	principal1	14	1	31001400	1498
ENSMUSG00000089749	processed_pseudogene	Gm11357	ENSMUST00000119758	processed_pseudogene		13	1	27314084	954
ENSMUSG00000110828	processed_pseudogene	Gm47517	ENSMUST00000216605	processed_pseudogene		9	1	8476273	215
ENSMUSG00000100082	processed_pseudogene	Gm28414	ENSMUST00000190111	processed_pseudogene		Y	-1	3950336	294
ENSMUSG00000093909	unprocessed_pseudogene	Gm3883	ENSMUST00000098119	unprocessed_pseudogene		4	1	42456965	3229
ENSMUSG00000024837	protein_coding	Dmrt1	ENSMUST00000025755	protein_coding	principal1	19	1	25505618	2340
ENSMUSG00000021916	protein_coding	Glt8d1	ENSMUST00000226378	protein_coding		14	1	31001404	213
ENSMUSG00000101712	unprocessed_pseudogene	Gm28648	ENSMUST00000190092	unprocessed_pseudogene		Y	1	3968870	343
ENSMUSG00000003233	protein_coding	Dvl3	ENSMUST00000171774	protein_coding		16	1	20517106	2319
ENSMUSG00000097962	lincRNA	1700034G24Rik	ENSMUST00000183186	lincRNA		5	-1	112589996	1081
ENSMUSG00000034037	protein_coding	Fgd5	ENSMUST00000146743	retained_intron		6	1	92067429	2294
ENSMUSG00000061829	protein_coding	Vmn1r214	ENSMUST00000227652	protein_coding	principal1	13	1	23030418	3906
ENSMUSG00000003233	protein_coding	Dvl3	ENSMUST00000169552	retained_intron		16	1	20517186	2936
ENSMUSG00000097962	lincRNA	1700034G24Rik	ENSMUST00000182949	lincRNA		5	-1	112589996	968
ENSMUSG00000061829	protein_coding	Vmn1r214	ENSMUST00000227236	protein_coding	principal1	13	1	23030418	3892
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000141654	processed_transcript		11	-1	120467465	588
ENSMUSG00000034037	protein_coding	Fgd5	ENSMUST00000130369	retained_intron		6	1	92071188	371
ENSMUSG00000098027	lincRNA	Gm27004	ENSMUST00000183300	lincRNA		5	1	112582645	727
ENSMUSG00000021916	protein_coding	Glt8d1	ENSMUST00000022476	protein_coding	principal1	14	1	31001450	2018
ENSMUSG00000061829	protein_coding	Vmn1r214	ENSMUST00000074252	protein_coding	principal1	13	1	23034294	1227
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000125806	processed_transcript		11	-1	120467334	607
ENSMUSG00000034037	protein_coding	Fgd5	ENSMUST00000113466	protein_coding	alternative2	6	1	91987110	5621
ENSMUSG00000107506	processed_pseudogene	Gm19254	ENSMUST00000204828	processed_pseudogene		6	1	122414104	294
ENSMUSG00000024837	protein_coding	Dmrt1	ENSMUST00000087525	protein_coding		19	1	25505706	1130
ENSMUSG00000015971	protein_coding	Actr8	ENSMUST00000016115	protein_coding	principal1	14	1	29978337	2119
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000152641	processed_transcript		11	-1	120467420	643
ENSMUSG00000094164	IG_V_gene	Ighv2-3	ENSMUST00000178229	IG_V_gene	principal1	12	-1	113611617	347
ENSMUSG00000103494	TEC	Gm37410	ENSMUST00000193623	TEC		1	-1	11366964	3039
ENSMUSG00000082797	processed_pseudogene	Gm12015	ENSMUST00000117065	processed_pseudogene		11	-1	17298419	843
ENSMUSG00000092035	protein_coding	Peg10	ENSMUST00000176204	protein_coding	principal2	6	1	4747306	6667
ENSMUSG00000078451	protein_coding	Ppil6	ENSMUST00000105507	protein_coding	principal1	10	1	41490439	1068
ENSMUSG00000015971	protein_coding	Actr8	ENSMUST00000224343	retained_intron		14	1	29978405	1728
ENSMUSG00000092035	protein_coding	Peg10	ENSMUST00000176551	protein_coding		6	1	4747406	6567
ENSMUSG00000062464	protein_coding	Cyp4f37	ENSMUST00000077639	protein_coding	principal1	17	1	32621309	2652
ENSMUSG00000024837	protein_coding	Dmrt1	ENSMUST00000160814	processed_transcript		19	1	25505707	1362
ENSMUSG00000015971	protein_coding	Actr8	ENSMUST00000225793	retained_intron		14	1	29978417	587
ENSMUSG00000038968	protein_coding	Klk1b16	ENSMUST00000005933	protein_coding	principal1	7	1	44136767	1387
ENSMUSG00000092035	protein_coding	Peg10	ENSMUST00000166678	protein_coding	alternative2	6	1	4747306	6662
ENSMUSG00000015971	protein_coding	Actr8	ENSMUST00000224797	protein_coding	principal1	14	1	29978418	2328
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000154136	processed_transcript		11	-1	120467481	760
ENSMUSG00000062464	protein_coding	Cyp4f37	ENSMUST00000235101	retained_intron		17	1	32634702	433
ENSMUSG00000059280	protein_coding	Vpreb2	ENSMUST00000075371	protein_coding	principal1	16	1	17980428	759
ENSMUSG00000108727	unprocessed_pseudogene	Gm44779	ENSMUST00000206937	unprocessed_pseudogene		7	-1	44195628	708
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000128824	processed_transcript		11	-1	120467421	938
ENSMUSG00000101558	unprocessed_pseudogene	Gm28647	ENSMUST00000188416	unprocessed_pseudogene		Y	-1	3986221	197
ENSMUSG00000107977	TEC	Gm44121	ENSMUST00000205169	TEC		6	1	4770900	2006
ENSMUSG00000078451	protein_coding	Ppil6	ENSMUST00000215608	retained_intron		10	1	41490477	531
ENSMUSG00000086646	lincRNA	Platr20	ENSMUST00000143209	lincRNA		11	-1	51220418	937
ENSMUSG00000015971	protein_coding	Actr8	ENSMUST00000225811	protein_coding		14	1	29982204	823
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000122973	processed_transcript		11	-1	120467396	547
ENSMUSG00000117459	unprocessed_pseudogene	Cyp4f38-ps	ENSMUST00000234094	unprocessed_pseudogene		17	1	32642725	900
ENSMUSG00000101130	processed_pseudogene	Gm19637	ENSMUST00000185933	processed_pseudogene		1	1	54566703	579
ENSMUSG00000078451	protein_coding	Ppil6	ENSMUST00000214145	protein_coding		10	1	41501650	516
ENSMUSG00000086646	lincRNA	Platr20	ENSMUST00000137964	lincRNA		11	-1	51219526	413
ENSMUSG00000020864	protein_coding	Ankrd40	ENSMUST00000107818	protein_coding	principal3	11	1	94328001	3487
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000150688	processed_transcript		11	-1	120467433	429
ENSMUSG00000116658	lincRNA	Gm49580	ENSMUST00000232261	lincRNA		16	1	18028664	1369
ENSMUSG00000015971	protein_coding	Actr8	ENSMUST00000225161	retained_intron		14	1	29985996	874
ENSMUSG00000116658	lincRNA	Gm49580	ENSMUST00000232657	lincRNA		16	1	18028679	1375
ENSMUSG00000048481	protein_coding	Mypop	ENSMUST00000059331	protein_coding	principal1	7	1	18991245	2173
ENSMUSG00000057594	protein_coding	Arl16	ENSMUST00000137639	processed_transcript		11	-1	120467453	427
ENSMUSG00000015971	protein_coding	Actr8	ENSMUST00000224846	processed_transcript		14	1	29988953	640
ENSMUSG00000086265	processed_pseudogene	Marcksl1-ps4	ENSMUST00000132531	processed_pseudogene		13	1	4248735	291
ENSMUSG00000069259	protein_coding	Prl6a1	ENSMUST00000091680	protein_coding	principal2	13	1	27312627	868
ENSMUSG00000015971	protein_coding	Actr8	ENSMUST00000224067	retained_intron		14	1	29989715	475
ENSMUSG00000082886	processed_pseudogene	Gm5386	ENSMUST00000121749	processed_pseudogene		X	-1	45549380	2450
ENSMUSG00000002731	protein_coding	Prkra	ENSMUST00000002808	protein_coding	principal1	2	-1	76648015	1614
ENSMUSG00000020864	protein_coding	Ankrd40	ENSMUST00000051221	protein_coding	alternative2	11	1	94328013	1477
ENSMUSG00000084158	processed_pseudogene	Gm14652	ENSMUST00000118479	processed_pseudogene		X	-1	45786560	235
ENSMUSG00000069259	protein_coding	Prl6a1	ENSMUST00000091679	protein_coding	alternative2	13	1	27313946	1093
ENSMUSG00000048481	protein_coding	Mypop	ENSMUST00000131087	protein_coding	principal1	7	1	18991319	1951
ENSMUSG00000091998	processed_pseudogene	Gm17072	ENSMUST00000166673	processed_pseudogene		8	1	81827698	658
ENSMUSG00000002731	protein_coding	Prkra	ENSMUST00000140493	processed_transcript		2	-1	76640733	706
ENSMUSG00000090584	processed_pseudogene	Gm17169	ENSMUST00000171382	processed_pseudogene		8	-1	81790908	351
ENSMUSG00000048481	protein_coding	Mypop	ENSMUST00000130268	retained_intron		7	1	18991969	1132
ENSMUSG00000063713	protein_coding	Klk1b24	ENSMUST00000073713	protein_coding	principal1	7	1	44188236	878
ENSMUSG00000015971	protein_coding	Actr8	ENSMUST00000225368	retained_intron		14	1	29991870	3998
ENSMUSG00000020864	protein_coding	Ankrd40	ENSMUST00000021227	protein_coding	alternative2	11	1	94328254	1215
ENSMUSG00000031548	protein_coding	Sfrp1	ENSMUST00000033952	protein_coding	principal1	8	1	23411502	4372
ENSMUSG00000086533	antisense	Mypopos	ENSMUST00000206304	antisense		7	-1	19001195	441
ENSMUSG00000086533	antisense	Mypopos	ENSMUST00000124897	antisense		7	-1	19001222	560
ENSMUSG00000020864	protein_coding	Ankrd40	ENSMUST00000149867	protein_coding		11	1	94333453	753
ENSMUSG00000086533	antisense	Mypopos	ENSMUST00000205975	antisense		7	-1	18997066	2321
ENSMUSG00000020864	protein_coding	Ankrd40	ENSMUST00000124087	retained_intron		11	1	94338290	828
ENSMUSG00000086533	antisense	Mypopos	ENSMUST00000206381	antisense		7	-1	19001206	473
ENSMUSG00000045205	protein_coding	Dpy19l4	ENSMUST00000084892	protein_coding	principal1	4	-1	11322137	6754
ENSMUSG00000074355	TEC	Gm10676	ENSMUST00000098778	TEC		7	-1	18992774	3221
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000169826	protein_coding	alternative1	14	1	24490718	519
ENSMUSG00000096498	IG_V_gene	Ighv2-5	ENSMUST00000195707	IG_V_gene	principal5	12	-1	113686045	480
ENSMUSG00000114394	processed_pseudogene	Gm19153	ENSMUST00000225369	processed_pseudogene		13	-1	23042994	579
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000225994	retained_intron		14	1	24490718	4059
ENSMUSG00000045205	protein_coding	Dpy19l4	ENSMUST00000128024	protein_coding		4	-1	11322137	1694
ENSMUSG00000111013	lincRNA	Gm32468	ENSMUST00000214199	lincRNA		10	1	93084206	1040
ENSMUSG00000096498	IG_V_gene	Ighv2-5	ENSMUST00000103449	IG_V_gene	alternative2	12	-1	113685915	347
ENSMUSG00000111013	lincRNA	Gm32468	ENSMUST00000214288	lincRNA		10	1	93085251	472
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000225023	protein_coding	principal4	14	1	24490718	1613
ENSMUSG00000114223	processed_pseudogene	Gm19108	ENSMUST00000225177	processed_pseudogene		13	-1	101842306	767
ENSMUSG00000071551	protein_coding	Akr1c19	ENSMUST00000118663	protein_coding	principal1	13	1	4228700	5832
ENSMUSG00000045205	protein_coding	Dpy19l4	ENSMUST00000142005	nonsense_mediated_decay		4	-1	11322075	2503
ENSMUSG00000118603	unprocessed_pseudogene	BX666061.1	ENSMUST00000239216	unprocessed_pseudogene		4	1	42587458	2311
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000223939	retained_intron		14	1	24490729	2769
ENSMUSG00000071551	protein_coding	Akr1c19	ENSMUST00000129751	protein_coding		13	1	4245328	747
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000172167	retained_intron		8	1	81342556	2705
ENSMUSG00000107060	lincRNA	Gm38901	ENSMUST00000202448	lincRNA		6	-1	127877246	3008
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000223999	protein_coding	alternative1	14	1	24490730	525
ENSMUSG00000095779	unprocessed_pseudogene	Gm2163	ENSMUST00000179734	unprocessed_pseudogene		4	1	42466972	1897
ENSMUSG00000021916	protein_coding	Glt8d1	ENSMUST00000228718	retained_intron		14	1	31001461	1681
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000155098	nonsense_mediated_decay		13	-1	55513438	1756
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000225117	processed_transcript		14	1	24490731	887
ENSMUSG00000045205	protein_coding	Dpy19l4	ENSMUST00000144941	processed_transcript		4	-1	11322047	562
ENSMUSG00000114762	lincRNA	Gm47007	ENSMUST00000223772	lincRNA		13	1	101855491	545
ENSMUSG00000066515	protein_coding	Klk1b3	ENSMUST00000085450	protein_coding	principal1	7	1	44198191	889
ENSMUSG00000045205	protein_coding	Dpy19l4	ENSMUST00000148524	processed_transcript		4	-1	11322100	471
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000224568	protein_coding		14	1	24490767	714
ENSMUSG00000095258	transcribed_unprocessed_pseudogene	Gm10593	ENSMUST00000178906	processed_transcript		4	1	42552478	3539
ENSMUSG00000095258	transcribed_unprocessed_pseudogene	Gm10593	ENSMUST00000238374	transcribed_unprocessed_pseudogene		4	1	42581840	3365
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000224549	processed_transcript		14	1	24490785	745
ENSMUSG00000039347	protein_coding	Atp6v0e2	ENSMUST00000040361	protein_coding	principal1	6	1	48537615	1789
ENSMUSG00000071551	protein_coding	Akr1c19	ENSMUST00000081326	protein_coding	principal1	13	1	4233740	1242
ENSMUSG00000000686	protein_coding	Abhd15	ENSMUST00000094004	protein_coding	principal1	11	1	77515121	2662
ENSMUSG00000103185	IG_V_pseudogene	Ighv5-11	ENSMUST00000193354	IG_V_pseudogene		12	-1	113687721	371
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000224569	processed_transcript		14	1	24490859	686
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000224699	processed_transcript		14	1	24491149	750
ENSMUSG00000114717	processed_pseudogene	Gm17832	ENSMUST00000224781	processed_pseudogene		13	1	101920420	1364
ENSMUSG00000037962	protein_coding	Rflna	ENSMUST00000036109	protein_coding	principal1	5	1	125003221	1681
ENSMUSG00000000686	protein_coding	Abhd15	ENSMUST00000145676	protein_coding		11	1	77515984	442
ENSMUSG00000094066	protein_coding	Fam205a2	ENSMUST00000180201	protein_coding	principal1	4	-1	42528175	3927
ENSMUSG00000102542	TEC	Gm38133	ENSMUST00000195109	TEC		13	-1	102116035	815
ENSMUSG00000037962	protein_coding	Rflna	ENSMUST00000145946	processed_transcript		5	1	125010113	590
ENSMUSG00000082411	processed_pseudogene	Gm12016	ENSMUST00000119079	processed_pseudogene		11	-1	17639183	681
ENSMUSG00000039347	protein_coding	Atp6v0e2	ENSMUST00000204277	retained_intron		6	1	48537638	857
ENSMUSG00000000686	protein_coding	Abhd15	ENSMUST00000147386	protein_coding		11	1	77518618	591
ENSMUSG00000025290	protein_coding	Rps24	ENSMUST00000112384	protein_coding	alternative1	14	1	24490681	468
ENSMUSG00000103027	processed_pseudogene	Gm37684	ENSMUST00000192779	processed_pseudogene		3	-1	49208068	355
ENSMUSG00000072673	antisense	Gm10392	ENSMUST00000100807	antisense		11	-1	77519198	1732
ENSMUSG00000037962	protein_coding	Rflna	ENSMUST00000197746	protein_coding	principal1	5	1	125003475	1649
ENSMUSG00000095429	IG_V_gene	Ighv5-12	ENSMUST00000103450	IG_V_gene	principal1	12	-1	113702578	353
ENSMUSG00000083124	unprocessed_pseudogene	Vmn1r-ps126	ENSMUST00000117681	unprocessed_pseudogene		13	1	23056683	926
ENSMUSG00000039347	protein_coding	Atp6v0e2	ENSMUST00000203011	protein_coding		6	1	48537665	1612
ENSMUSG00000081451	processed_pseudogene	Gm12734	ENSMUST00000120228	processed_pseudogene		11	1	77542133	948
ENSMUSG00000114444	processed_pseudogene	Gm47008	ENSMUST00000225142	processed_pseudogene		13	-1	102367152	262
ENSMUSG00000036968	protein_coding	Cnpy4	ENSMUST00000110934	protein_coding	principal1	5	1	138187485	1855
ENSMUSG00000021916	protein_coding	Glt8d1	ENSMUST00000226348	retained_intron		14	1	31001676	1923
ENSMUSG00000099949	processed_pseudogene	Gm29124	ENSMUST00000186576	processed_pseudogene		1	-1	80898105	452
ENSMUSG00000099917	protein_coding	Vmn1r215	ENSMUST00000228092	protein_coding	principal1	13	1	23068025	2790
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000118276	protein_coding	principal3	7	1	142434977	1503
ENSMUSG00000036968	protein_coding	Cnpy4	ENSMUST00000110932	protein_coding		5	1	138189917	737
ENSMUSG00000021916	protein_coding	Glt8d1	ENSMUST00000228255	retained_intron		14	1	31006459	1692
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000128840	protein_coding		16	1	20668315	635
ENSMUSG00000096670	IG_V_gene	Ighv2-6	ENSMUST00000179657	IG_V_gene	principal1	12	-1	113717103	350
ENSMUSG00000099917	protein_coding	Vmn1r215	ENSMUST00000072972	protein_coding	principal1	13	1	23075743	1048
ENSMUSG00000036968	protein_coding	Cnpy4	ENSMUST00000130126	retained_intron		5	1	138190112	696
ENSMUSG00000021916	protein_coding	Glt8d1	ENSMUST00000228914	retained_intron		14	1	31006516	487
ENSMUSG00000021916	protein_coding	Glt8d1	ENSMUST00000226271	retained_intron		14	1	31006633	772
ENSMUSG00000021916	protein_coding	Glt8d1	ENSMUST00000227783	retained_intron		14	1	31010332	955
ENSMUSG00000102679	lincRNA	Gm20557	ENSMUST00000192871	lincRNA		3	1	49325680	2794
ENSMUSG00000049285	protein_coding	Mblac1	ENSMUST00000057773	protein_coding	principal1	5	1	138194314	1308
ENSMUSG00000021916	protein_coding	Glt8d1	ENSMUST00000226959	retained_intron		14	1	31011308	684
ENSMUSG00000090305	processed_pseudogene	Gm5459	ENSMUST00000171235	processed_pseudogene		14	-1	31077435	798
ENSMUSG00000104309	processed_pseudogene	Gm5846	ENSMUST00000193146	processed_pseudogene		3	-1	49382746	1414
ENSMUSG00000018507	protein_coding	Trpv2	ENSMUST00000151195	processed_transcript		11	1	62574486	3671
ENSMUSG00000081912	transcribed_unprocessed_pseudogene	Vmn1r-ps127	ENSMUST00000118007	transcribed_unprocessed_pseudogene		13	1	23104296	478
ENSMUSG00000114245	protein_coding	Gm38655	ENSMUST00000224277	protein_coding	principal1	17	-1	25175471	906
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000153230	retained_intron		13	-1	55513434	3573
ENSMUSG00000044952	protein_coding	Kctd21	ENSMUST00000054107	protein_coding	principal1	7	1	97332327	2966
ENSMUSG00000115697	protein_coding	Vmn1r216	ENSMUST00000228802	nonsense_mediated_decay		13	1	23096976	7448
ENSMUSG00000115697	protein_coding	Vmn1r216	ENSMUST00000228389	protein_coding	principal1	13	1	23096976	10213
ENSMUSG00000115697	protein_coding	Vmn1r216	ENSMUST00000227317	processed_transcript		13	1	23096976	8838
ENSMUSG00000080861	transcribed_processed_pseudogene	Gm11325	ENSMUST00000119967	transcribed_processed_pseudogene		13	1	23103454	469
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000128910	retained_intron		13	-1	55513437	1694
ENSMUSG00000111913	TEC	Gm49751	ENSMUST00000219775	TEC		10	1	118441419	2722
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000105976	protein_coding	alternative2	7	1	142435001	1289
ENSMUSG00000115791	protein_coding	Vmn1r217	ENSMUST00000228656	protein_coding	principal1	13	-1	23117857	9767
ENSMUSG00000114846	lincRNA	Gm29927	ENSMUST00000225128	lincRNA		13	-1	102590285	3602
ENSMUSG00000115791	protein_coding	Vmn1r217	ENSMUST00000227110	protein_coding	principal1	13	-1	23118226	9888
ENSMUSG00000041974	protein_coding	Spidr	ENSMUST00000040248	protein_coding	principal1	16	-1	16146851	3282
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000031731	protein_coding	principal2	5	-1	137611487	1626
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000097939	protein_coding	alternative2	7	1	142435001	1300
ENSMUSG00000103240	IG_V_pseudogene	Gm37976	ENSMUST00000193827	IG_V_pseudogene		12	-1	113719231	345
ENSMUSG00000115791	protein_coding	Vmn1r217	ENSMUST00000091721	protein_coding	principal1	13	-1	23114730	897
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000146589	retained_intron		5	-1	137605798	555
ENSMUSG00000114730	processed_pseudogene	Gm47014	ENSMUST00000225869	processed_pseudogene		13	1	102604533	2371
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000197912	protein_coding		5	-1	137610474	799
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000148896	retained_intron		7	1	142435001	1148
ENSMUSG00000041974	protein_coding	Spidr	ENSMUST00000229846	retained_intron		16	-1	16146804	6343
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000046246	protein_coding	principal1	13	-1	55513446	1697
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000054564	protein_coding	alternative2	5	-1	137611376	1585
ENSMUSG00000071637	protein_coding	Cebpd	ENSMUST00000096232	protein_coding	principal1	16	1	15887286	3746
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000122393	protein_coding	alternative2	7	1	142436834	1291
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000131703	retained_intron		5	-1	137608192	875
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000136649	processed_transcript		5	-1	137611343	651
ENSMUSG00000071637	protein_coding	Cebpd	ENSMUST00000210772	processed_transcript		16	1	15888416	430
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000105977	protein_coding		7	1	142438132	310
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000161527	protein_coding	principal1	15	1	76351294	1743
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000145964	retained_intron		7	1	142438421	886
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000069968	protein_coding		13	-1	55513438	1006
ENSMUSG00000052133	protein_coding	Sema5b	ENSMUST00000120756	protein_coding	alternative2	16	1	35541362	4646
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000124963	retained_intron		7	1	142439015	813
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000142675	protein_coding		5	-1	137610702	801
ENSMUSG00000031098	protein_coding	Syt8	ENSMUST00000210746	nonsense_mediated_decay		7	1	142439360	624
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000111370	protein_coding		2	-1	91182848	5879
ENSMUSG00000044328	protein_coding	Trp53i13	ENSMUST00000060417	protein_coding	principal2	11	-1	77513370	1463
ENSMUSG00000050244	protein_coding	Heatr1	ENSMUST00000059270	protein_coding	principal1	13	1	12395371	6780
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000155251	protein_coding		5	-1	137613762	509
ENSMUSG00000097691	lincRNA	9030616G12Rik	ENSMUST00000181142	lincRNA		10	1	128971197	644
ENSMUSG00000055170	protein_coding	Ifng	ENSMUST00000068592	protein_coding	principal1	10	1	118441046	1208
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000069929	protein_coding		13	-1	55513434	899
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000223667	processed_transcript		19	-1	16631347	2483
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000111376	protein_coding	alternative2	2	-1	91182888	5927
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000124693	protein_coding		5	-1	137613784	640
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000160853	protein_coding	principal1	15	1	76351294	1651
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000148662	retained_intron		5	-1	137611319	810
ENSMUSG00000032633	protein_coding	Flcn	ENSMUST00000102697	protein_coding	principal1	11	-1	59810016	3437
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000131306	protein_coding		13	-1	55513438	1915
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000099723	protein_coding	alternative2	2	-1	91182889	5977
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000023212	protein_coding	principal1	15	1	76351306	1686
ENSMUSG00000029718	protein_coding	Pcolce	ENSMUST00000137210	processed_transcript		5	-1	137611326	579
ENSMUSG00000050244	protein_coding	Heatr1	ENSMUST00000221046	nonsense_mediated_decay		13	1	12395412	1325
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000128911	retained_intron		13	-1	55509020	450
ENSMUSG00000044328	protein_coding	Trp53i13	ENSMUST00000126857	processed_transcript		11	-1	77512763	913
ENSMUSG00000065987	protein_coding	Cd209b	ENSMUST00000111014	nonsense_mediated_decay		8	-1	3926844	1900
ENSMUSG00000069430	protein_coding	Olfr9	ENSMUST00000091996	protein_coding	principal1	10	1	128989431	2672
ENSMUSG00000052133	protein_coding	Sema5b	ENSMUST00000050625	protein_coding	principal2	16	1	35541571	4350
ENSMUSG00000050244	protein_coding	Heatr1	ENSMUST00000221746	retained_intron		13	1	12412206	446
ENSMUSG00000044328	protein_coding	Trp53i13	ENSMUST00000124690	processed_transcript		11	-1	77513035	332
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000144288	protein_coding		13	-1	55513676	457
ENSMUSG00000074955	protein_coding	Olfr1305	ENSMUST00000216310	processed_transcript		2	-1	111877149	1173
ENSMUSG00000044328	protein_coding	Trp53i13	ENSMUST00000136101	protein_coding	alternative2	11	-1	77515731	595
ENSMUSG00000055170	protein_coding	Ifng	ENSMUST00000220309	retained_intron		10	1	118441047	378
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000136583	retained_intron		13	-1	55513421	396
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000162871	retained_intron		15	1	76351309	798
ENSMUSG00000021493	protein_coding	Pdlim7	ENSMUST00000153426	protein_coding		13	-1	55512709	365
ENSMUSG00000104437	processed_pseudogene	Gm37424	ENSMUST00000191727	processed_pseudogene		3	1	49530750	561
ENSMUSG00000052133	protein_coding	Sema5b	ENSMUST00000139805	retained_intron		16	1	35658095	268
ENSMUSG00000050244	protein_coding	Heatr1	ENSMUST00000222091	nonsense_mediated_decay		13	1	12424741	2482
ENSMUSG00000074955	protein_coding	Olfr1305	ENSMUST00000213405	protein_coding	principal1	2	-1	111877149	1815
ENSMUSG00000044328	protein_coding	Trp53i13	ENSMUST00000139195	processed_transcript		11	-1	77515980	368
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000160857	processed_transcript		15	1	76351327	357
ENSMUSG00000063374	protein_coding	Olfr763	ENSMUST00000077460	protein_coding	principal1	10	1	129010791	2523
ENSMUSG00000063881	protein_coding	Olfr376	ENSMUST00000120401	protein_coding	principal3	11	1	73371246	3342
ENSMUSG00000083143	processed_pseudogene	Gm13424	ENSMUST00000122301	processed_pseudogene		2	1	31660470	354
ENSMUSG00000074955	protein_coding	Olfr1305	ENSMUST00000213737	protein_coding	principal1	2	-1	111877149	1775
ENSMUSG00000050244	protein_coding	Heatr1	ENSMUST00000221051	retained_intron		13	1	12434030	556
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000160172	protein_coding		15	1	76351327	1537
ENSMUSG00000063881	protein_coding	Olfr376	ENSMUST00000170592	protein_coding	principal3	11	1	73371246	3211
ENSMUSG00000074955	protein_coding	Olfr1305	ENSMUST00000099608	protein_coding	principal1	2	-1	111873853	939
ENSMUSG00000050244	protein_coding	Heatr1	ENSMUST00000221616	retained_intron		13	1	12434408	681
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000160097	retained_intron		15	1	76351353	379
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000161786	retained_intron		15	1	76351409	638
ENSMUSG00000073725	protein_coding	Lmbrd1	ENSMUST00000191471	protein_coding	principal1	1	1	24678630	4453
ENSMUSG00000063881	protein_coding	Olfr376	ENSMUST00000078952	protein_coding	alternative2	11	1	73371246	1210
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000160914	protein_coding		15	1	76352006	755
ENSMUSG00000067722	protein_coding	BC003965	ENSMUST00000088307	protein_coding	principal1	17	1	25184554	3030
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000160069	retained_intron		15	1	76352034	774
ENSMUSG00000030351	protein_coding	Tspan11	ENSMUST00000032501	protein_coding	principal1	6	1	127887589	5188
ENSMUSG00000073725	protein_coding	Lmbrd1	ENSMUST00000186096	protein_coding		1	1	24678660	688
ENSMUSG00000032633	protein_coding	Flcn	ENSMUST00000148151	retained_intron		11	-1	59809924	3567
ENSMUSG00000067722	protein_coding	BC003965	ENSMUST00000232784	retained_intron		17	1	25184554	3109
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000091790	protein_coding		18	-1	80933983	5357
ENSMUSG00000073725	protein_coding	Lmbrd1	ENSMUST00000186190	protein_coding		1	1	24678739	448
ENSMUSG00000052133	protein_coding	Sema5b	ENSMUST00000149855	processed_transcript		16	1	35658585	1563
ENSMUSG00000032633	protein_coding	Flcn	ENSMUST00000091246	protein_coding	principal1	11	-1	59809588	2768
ENSMUSG00000030351	protein_coding	Tspan11	ENSMUST00000149801	retained_intron		6	1	127887772	532
ENSMUSG00000052133	protein_coding	Sema5b	ENSMUST00000149097	retained_intron		16	1	35659435	717
ENSMUSG00000100068	processed_pseudogene	Gm18558	ENSMUST00000186253	processed_pseudogene		7	-1	35499717	1214
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000162865	retained_intron		15	1	76352770	890
ENSMUSG00000073725	protein_coding	Lmbrd1	ENSMUST00000095062	protein_coding		1	1	24678926	5228
ENSMUSG00000085813	antisense	Gm15870	ENSMUST00000132657	antisense		6	-1	127944839	644
ENSMUSG00000032633	protein_coding	Flcn	ENSMUST00000133647	processed_transcript		11	-1	59809601	636
ENSMUSG00000052133	protein_coding	Sema5b	ENSMUST00000128347	processed_transcript		16	1	35661305	694
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000161391	retained_intron		15	1	76352894	757
ENSMUSG00000052133	protein_coding	Sema5b	ENSMUST00000128966	retained_intron		16	1	35662471	766
ENSMUSG00000073725	protein_coding	Lmbrd1	ENSMUST00000187468	retained_intron		1	1	24728642	742
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000225980	protein_coding	principal1	18	-1	80934058	5150
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000160875	retained_intron		15	1	76353101	506
ENSMUSG00000116837	unprocessed_pseudogene	Vmn2r-ps115	ENSMUST00000231667	unprocessed_pseudogene		17	1	18694403	1976
ENSMUSG00000081264	processed_pseudogene	Gm14021	ENSMUST00000117683	processed_pseudogene		2	-1	121701725	961
ENSMUSG00000032633	protein_coding	Flcn	ENSMUST00000047706	protein_coding		11	-1	59809994	842
ENSMUSG00000093602	unprocessed_pseudogene	Vmn2r-ps116	ENSMUST00000175997	unprocessed_pseudogene		17	1	18763260	206
ENSMUSG00000032633	protein_coding	Flcn	ENSMUST00000151453	retained_intron		11	-1	59809711	510
ENSMUSG00000084244	processed_pseudogene	Gm14020	ENSMUST00000118165	processed_pseudogene		2	1	121718530	662
ENSMUSG00000073725	protein_coding	Lmbrd1	ENSMUST00000190195	protein_coding		1	1	24744873	529
ENSMUSG00000022553	protein_coding	Maf1	ENSMUST00000161072	processed_transcript		15	1	76353415	455
ENSMUSG00000083381	unprocessed_pseudogene	Scgb2b22-ps	ENSMUST00000121947	unprocessed_pseudogene		7	-1	33606052	340
ENSMUSG00000079892	unprocessed_pseudogene	Scgb1b22-ps	ENSMUST00000116008	unprocessed_pseudogene		7	1	33614622	280
ENSMUSG00000095398	unprocessed_pseudogene	Gm16404	ENSMUST00000177739	unprocessed_pseudogene		X	1	55553147	468
ENSMUSG00000081298	unprocessed_pseudogene	Gm14622	ENSMUST00000117117	unprocessed_pseudogene		X	1	55699744	468
ENSMUSG00000079893	unprocessed_pseudogene	Scgb1b23-ps	ENSMUST00000116009	unprocessed_pseudogene		7	1	33635164	252
ENSMUSG00000097550	protein_coding	Gm21304	ENSMUST00000181059	protein_coding	principal1	10	1	104168515	1246
ENSMUSG00000096374	unprocessed_pseudogene	Gm6664	ENSMUST00000119138	unprocessed_pseudogene		X	1	55798272	468
ENSMUSG00000097550	protein_coding	Gm21304	ENSMUST00000180568	protein_coding	principal1	10	1	104168930	1185
ENSMUSG00000084369	unprocessed_pseudogene	Gm14626	ENSMUST00000117619	unprocessed_pseudogene		X	1	55839252	216
ENSMUSG00000093531	unprocessed_pseudogene	Vmn2r-ps117	ENSMUST00000176899	unprocessed_pseudogene		17	1	18810835	5501
ENSMUSG00000020649	protein_coding	Rrm2	ENSMUST00000020980	protein_coding	principal1	12	1	24708241	2193
ENSMUSG00000083896	transcribed_unprocessed_pseudogene	Scgb2b23-ps	ENSMUST00000167012	processed_transcript		7	-1	33653281	516
ENSMUSG00000081706	processed_pseudogene	Gm7927	ENSMUST00000118818	processed_pseudogene		X	-1	55846638	880
ENSMUSG00000083896	transcribed_unprocessed_pseudogene	Scgb2b23-ps	ENSMUST00000122094	transcribed_unprocessed_pseudogene		7	-1	33627101	330
ENSMUSG00000061947	protein_coding	Serpina10	ENSMUST00000044231	protein_coding	principal1	12	-1	103631444	3498
ENSMUSG00000020649	protein_coding	Rrm2	ENSMUST00000147789	retained_intron		12	1	24708556	730
ENSMUSG00000020649	protein_coding	Rrm2	ENSMUST00000153058	protein_coding		12	1	24708752	781
ENSMUSG00000094144	protein_coding	Gm21312	ENSMUST00000180889	protein_coding	alternative2	10	1	104177024	1246
ENSMUSG00000061947	protein_coding	Serpina10	ENSMUST00000121625	protein_coding		12	-1	103631421	1424
ENSMUSG00000020649	protein_coding	Rrm2	ENSMUST00000154588	protein_coding		12	1	24709029	841
ENSMUSG00000094144	protein_coding	Gm21312	ENSMUST00000181239	protein_coding	alternative2	10	1	104177439	1185
ENSMUSG00000094144	protein_coding	Gm21312	ENSMUST00000179258	protein_coding	principal2	10	1	104178378	795
ENSMUSG00000091491	protein_coding	Vmn2r97	ENSMUST00000232325	processed_transcript		17	1	18914300	3711
ENSMUSG00000100344	processed_pseudogene	Gm29640	ENSMUST00000187972	processed_pseudogene		1	-1	61981207	278
ENSMUSG00000103002	TEC	Gm38075	ENSMUST00000191979	TEC		1	1	61805221	920
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000055241	protein_coding	principal1	2	-1	120563807	9085
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000225235	nonsense_mediated_decay		18	-1	80933983	4326
ENSMUSG00000085842	antisense	Pard3bos1	ENSMUST00000138535	antisense		1	-1	61851462	1878
ENSMUSG00000097746	processed_transcript	Gm6225	ENSMUST00000181558	antisense		18	1	3336680	1436
ENSMUSG00000085842	antisense	Pard3bos1	ENSMUST00000130699	antisense		1	-1	61851540	733
ENSMUSG00000097746	processed_transcript	Gm6225	ENSMUST00000234647	retained_intron		18	1	3336738	6745
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000171215	protein_coding		2	-1	120539860	6391
ENSMUSG00000096596	protein_coding	Gm10591	ENSMUST00000178168	protein_coding	principal1	4	1	42612121	869
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000225075	processed_transcript		18	-1	80742969	454
ENSMUSG00000100750	antisense	Gm29084	ENSMUST00000185587	antisense		1	-1	62535942	1452
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000225218	processed_transcript		18	-1	80753053	456
ENSMUSG00000102359	TEC	Gm38351	ENSMUST00000195466	TEC		1	1	62247153	2518
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000130303	retained_intron		2	-1	120512865	458
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000225092	retained_intron		18	-1	80752996	748
ENSMUSG00000104081	TEC	Gm38278	ENSMUST00000194715	TEC		1	1	61702527	1365
ENSMUSG00000101509	processed_pseudogene	Gm29641	ENSMUST00000188955	processed_pseudogene		1	-1	62095339	259
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000139942	retained_intron		2	-1	120520546	467
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000237845	retained_intron		18	-1	80759987	2920
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000225692	retained_intron		18	-1	80762242	721
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000152347	protein_coding		2	-1	120524619	794
ENSMUSG00000085019	antisense	Pard3bos2	ENSMUST00000127498	antisense		1	-1	62136109	770
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000224283	retained_intron		18	-1	80762672	794
ENSMUSG00000104402	TEC	Gm38012	ENSMUST00000193022	TEC		1	1	61677249	3029
ENSMUSG00000091491	protein_coding	Vmn2r97	ENSMUST00000168710	protein_coding	principal1	17	1	18914300	12624
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000225205	nonsense_mediated_decay		18	-1	80934032	3038
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000226064	protein_coding		18	-1	80934048	815
ENSMUSG00000091491	protein_coding	Vmn2r97	ENSMUST00000232219	protein_coding		17	1	18914300	3497
ENSMUSG00000093607	unprocessed_pseudogene	Vmn2r-ps118	ENSMUST00000176785	unprocessed_pseudogene		17	1	18989621	908
ENSMUSG00000018507	protein_coding	Trpv2	ENSMUST00000018651	protein_coding	principal1	11	1	62574538	2909
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000223926	nonsense_mediated_decay		18	-1	80877365	732
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000141874	retained_intron		2	-1	120563814	4375
ENSMUSG00000018507	protein_coding	Trpv2	ENSMUST00000130569	processed_transcript		11	1	62575547	1005
ENSMUSG00000052062	protein_coding	Pard3b	ENSMUST00000138768	processed_transcript		1	1	61638824	1057
ENSMUSG00000018507	protein_coding	Trpv2	ENSMUST00000102643	protein_coding	principal1	11	1	62576125	2650
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000149210	retained_intron		2	-1	120528515	460
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000224709	nonsense_mediated_decay		18	-1	80912867	770
ENSMUSG00000059939	protein_coding	9430015G10Rik	ENSMUST00000072554	protein_coding	principal1	4	1	156109982	2528
ENSMUSG00000095022	protein_coding	Gm20765	ENSMUST00000181703	protein_coding	alternative2	10	1	104185533	1246
ENSMUSG00000095022	protein_coding	Gm20765	ENSMUST00000181707	protein_coding	alternative2	10	1	104185948	1185
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000163384	nonsense_mediated_decay		2	-1	120532058	677
ENSMUSG00000095022	protein_coding	Gm20765	ENSMUST00000177792	protein_coding	principal2	10	1	104186887	795
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000235385	retained_intron		18	-1	80934060	2533
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000135625	protein_coding		2	-1	120563843	641
ENSMUSG00000018507	protein_coding	Trpv2	ENSMUST00000153486	processed_transcript		11	1	62581267	438
ENSMUSG00000024566	protein_coding	Atp9b	ENSMUST00000225345	retained_intron		18	-1	80917823	533
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000167241	protein_coding		2	-1	120555280	505
ENSMUSG00000114891	antisense	Gm47272	ENSMUST00000225900	antisense		18	1	80822247	584
ENSMUSG00000027288	protein_coding	Zfp106	ENSMUST00000147353	processed_transcript		2	-1	120563834	691
ENSMUSG00000042734	protein_coding	Ttc9	ENSMUST00000218362	protein_coding	principal1	12	1	81631249	4754
ENSMUSG00000035027	protein_coding	Map2k2	ENSMUST00000143517	protein_coding	principal3	10	1	81105915	2405
ENSMUSG00000096717	protein_coding	Vmn2r98	ENSMUST00000170424	protein_coding	principal1	17	1	19053460	3707
ENSMUSG00000022351	protein_coding	Sqle	ENSMUST00000162142	retained_intron		15	1	59315077	4467
ENSMUSG00000042734	protein_coding	Ttc9	ENSMUST00000036116	protein_coding	principal1	12	1	81631369	2042
ENSMUSG00000059939	protein_coding	9430015G10Rik	ENSMUST00000125786	processed_transcript		4	1	156109985	2937
ENSMUSG00000085593	antisense	4930589P08Rik	ENSMUST00000129097	antisense		4	1	151376470	1084
ENSMUSG00000059939	protein_coding	9430015G10Rik	ENSMUST00000105576	protein_coding		4	1	156109999	1329
ENSMUSG00000045075	lincRNA	Gm9796	ENSMUST00000191115	lincRNA		11	-1	95699143	2246
ENSMUSG00000045075	lincRNA	Gm9796	ENSMUST00000062249	lincRNA		11	-1	95699143	2250
ENSMUSG00000059939	protein_coding	9430015G10Rik	ENSMUST00000127332	processed_transcript		4	1	156110019	689
ENSMUSG00000059939	protein_coding	9430015G10Rik	ENSMUST00000141802	processed_transcript		4	1	156110030	723
ENSMUSG00000059939	protein_coding	9430015G10Rik	ENSMUST00000154944	processed_transcript		4	1	156110039	422
ENSMUSG00000035027	protein_coding	Map2k2	ENSMUST00000105331	protein_coding	alternative1	10	1	81105947	1556
ENSMUSG00000029826	protein_coding	Zc3hav1	ENSMUST00000114900	protein_coding	principal1	6	-1	38354273	4944
ENSMUSG00000059939	protein_coding	9430015G10Rik	ENSMUST00000141882	processed_transcript		4	1	156113896	573
ENSMUSG00000029826	protein_coding	Zc3hav1	ENSMUST00000143702	protein_coding		6	-1	38354273	3364
ENSMUSG00000059939	protein_coding	9430015G10Rik	ENSMUST00000169550	protein_coding	principal1	4	1	156109998	2660
ENSMUSG00000035027	protein_coding	Map2k2	ENSMUST00000048223	nonsense_mediated_decay		10	1	81105972	1625
ENSMUSG00000035027	protein_coding	Map2k2	ENSMUST00000136743	protein_coding		10	1	81106345	482
ENSMUSG00000035027	protein_coding	Map2k2	ENSMUST00000123888	retained_intron		10	1	81118612	620
ENSMUSG00000022322	protein_coding	Shcbp1	ENSMUST00000022945	protein_coding	principal1	8	-1	4779554	2156
ENSMUSG00000035027	protein_coding	Map2k2	ENSMUST00000220329	protein_coding		10	1	81119340	662
ENSMUSG00000105039	lincRNA	Gm32585	ENSMUST00000198586	lincRNA		5	-1	125272815	764
ENSMUSG00000017291	protein_coding	Taok1	ENSMUST00000017435	protein_coding	principal1	11	-1	77585506	11813
ENSMUSG00000028955	protein_coding	Vamp3	ENSMUST00000030797	protein_coding	principal1	4	-1	151057953	2120
ENSMUSG00000035027	protein_coding	Map2k2	ENSMUST00000128937	retained_intron		10	1	81120854	917
ENSMUSG00000024617	protein_coding	Camk2a	ENSMUST00000102888	protein_coding	principal2	18	1	60925618	4970
ENSMUSG00000028955	protein_coding	Vamp3	ENSMUST00000155446	retained_intron		4	-1	151057946	822
ENSMUSG00000028955	protein_coding	Vamp3	ENSMUST00000125205	retained_intron		4	-1	151057963	423
ENSMUSG00000017291	protein_coding	Taok1	ENSMUST00000058496	protein_coding	principal1	11	-1	77607815	12409
ENSMUSG00000035027	protein_coding	Map2k2	ENSMUST00000123241	retained_intron		10	1	81122160	761
ENSMUSG00000029826	protein_coding	Zc3hav1	ENSMUST00000031850	protein_coding		6	-1	38354603	3400
ENSMUSG00000022322	protein_coding	Shcbp1	ENSMUST00000208856	retained_intron		8	-1	4779551	2365
ENSMUSG00000024617	protein_coding	Camk2a	ENSMUST00000134496	retained_intron		18	1	60925632	2301
ENSMUSG00000035027	protein_coding	Map2k2	ENSMUST00000218571	protein_coding		10	1	81128615	1803
ENSMUSG00000029826	protein_coding	Zc3hav1	ENSMUST00000114898	protein_coding		6	-1	38354603	3052
ENSMUSG00000022322	protein_coding	Shcbp1	ENSMUST00000207665	retained_intron		8	-1	4746424	2606
ENSMUSG00000085723	antisense	Gm15915	ENSMUST00000147379	antisense		10	-1	93683322	908
ENSMUSG00000022322	protein_coding	Shcbp1	ENSMUST00000207876	protein_coding		8	-1	4749675	620
ENSMUSG00000086891	antisense	Gm15963	ENSMUST00000131387	antisense		10	-1	93728207	876
ENSMUSG00000022322	protein_coding	Shcbp1	ENSMUST00000207262	protein_coding		8	-1	4779476	508
ENSMUSG00000022322	protein_coding	Shcbp1	ENSMUST00000208381	retained_intron		8	-1	4779567	1937
ENSMUSG00000020019	protein_coding	Ntn4	ENSMUST00000147080	protein_coding		10	1	93640681	582
ENSMUSG00000102645	IG_V_pseudogene	Ighv5-5	ENSMUST00000193826	IG_V_pseudogene		12	-1	113613442	329
ENSMUSG00000022322	protein_coding	Shcbp1	ENSMUST00000207725	retained_intron		8	-1	4779559	1022
ENSMUSG00000046450	protein_coding	Olfr71	ENSMUST00000217544	protein_coding	principal1	4	-1	43710231	2707
ENSMUSG00000109462	processed_pseudogene	Gm6334	ENSMUST00000207083	processed_pseudogene		8	1	4778042	228
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000097948	retained_intron		4	1	102741297	744
ENSMUSG00000024617	protein_coding	Camk2a	ENSMUST00000025519	protein_coding	alternative1	18	1	60925632	3244
ENSMUSG00000046450	protein_coding	Olfr71	ENSMUST00000107862	protein_coding	principal1	4	-1	43710255	2587
ENSMUSG00000046450	protein_coding	Olfr71	ENSMUST00000055401	protein_coding	principal1	4	-1	43706566	939
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000142430	processed_transcript		4	1	102759222	2271
ENSMUSG00000024617	protein_coding	Camk2a	ENSMUST00000115297	protein_coding		18	1	60925725	499
ENSMUSG00000091938	unprocessed_pseudogene	Gm2564	ENSMUST00000166898	unprocessed_pseudogene		4	1	42629897	322
ENSMUSG00000082306	unprocessed_pseudogene	Gm11358	ENSMUST00000122310	unprocessed_pseudogene		13	1	27331428	373
ENSMUSG00000027305	protein_coding	Ndufaf1	ENSMUST00000110801	protein_coding	alternative2	2	-1	119662820	1478
ENSMUSG00000024617	protein_coding	Camk2a	ENSMUST00000137805	protein_coding		18	1	60926949	530
ENSMUSG00000027463	protein_coding	Slc52a3	ENSMUST00000073228	protein_coding	principal1	2	1	151996535	2669
ENSMUSG00000027305	protein_coding	Ndufaf1	ENSMUST00000110802	protein_coding	alternative2	2	-1	119662821	1308
ENSMUSG00000045751	protein_coding	Mms22l	ENSMUST00000108222	protein_coding	principal1	4	1	24496451	4478
ENSMUSG00000027305	protein_coding	Ndufaf1	ENSMUST00000154127	processed_transcript		2	-1	119662812	622
ENSMUSG00000044030	protein_coding	Irf2bp1	ENSMUST00000053713	protein_coding	principal1	7	1	19004044	2734
ENSMUSG00000024617	protein_coding	Camk2a	ENSMUST00000115295	protein_coding		18	1	60963554	979
ENSMUSG00000027305	protein_coding	Ndufaf1	ENSMUST00000131596	processed_transcript		2	-1	119662827	291
ENSMUSG00000006649	protein_coding	Nphs1	ENSMUST00000126297	protein_coding	alternative2	7	1	30458315	3877
ENSMUSG00000024617	protein_coding	Camk2a	ENSMUST00000039904	protein_coding		18	1	60963600	1734
ENSMUSG00000027305	protein_coding	Ndufaf1	ENSMUST00000028768	protein_coding	principal2	2	-1	119662798	1451
ENSMUSG00000027463	protein_coding	Slc52a3	ENSMUST00000109861	protein_coding	principal1	2	1	151999865	2590
ENSMUSG00000045751	protein_coding	Mms22l	ENSMUST00000138567	protein_coding		4	1	24496462	1350
ENSMUSG00000071001	protein_coding	Hrct1	ENSMUST00000095109	protein_coding	principal1	4	1	43727188	1452
ENSMUSG00000045751	protein_coding	Mms22l	ENSMUST00000139050	processed_transcript		4	1	24496465	373
ENSMUSG00000042724	protein_coding	Map3k9	ENSMUST00000035987	protein_coding	principal2	12	-1	81781175	4564
ENSMUSG00000045751	protein_coding	Mms22l	ENSMUST00000050446	protein_coding		4	1	24496544	4261
ENSMUSG00000045751	protein_coding	Mms22l	ENSMUST00000172622	protein_coding		4	1	24497896	969
ENSMUSG00000102063	lincRNA	Gm28706	ENSMUST00000186830	lincRNA		1	1	125444567	355
ENSMUSG00000096796	lincRNA	1700021P04Rik	ENSMUST00000178667	lincRNA		19	1	24064793	659
ENSMUSG00000001334	protein_coding	Fndc5	ENSMUST00000102600	protein_coding	principal1	4	1	129136999	2763
ENSMUSG00000042724	protein_coding	Map3k9	ENSMUST00000222322	protein_coding	alternative2	12	-1	81780874	3303
ENSMUSG00000108145	lincRNA	Gm38811	ENSMUST00000203781	lincRNA		6	-1	51711081	3478
ENSMUSG00000110404	protein_coding	Rnf223	ENSMUST00000209248	protein_coding	principal1	4	1	156130513	2908
ENSMUSG00000039458	protein_coding	Mtmr12	ENSMUST00000038172	protein_coding	principal1	15	1	12205028	6840
ENSMUSG00000022351	protein_coding	Sqle	ENSMUST00000022977	protein_coding	principal1	15	1	59315081	2758
ENSMUSG00000006649	protein_coding	Nphs1	ENSMUST00000006825	protein_coding	principal2	7	1	30459725	4608
ENSMUSG00000110874	lincRNA	D030045P18Rik	ENSMUST00000213571	lincRNA		10	1	45807562	2370
ENSMUSG00000042724	protein_coding	Map3k9	ENSMUST00000223292	retained_intron		12	-1	81781009	3227
ENSMUSG00000110874	lincRNA	D030045P18Rik	ENSMUST00000213245	lincRNA		10	1	45807704	1892
ENSMUSG00000110874	lincRNA	D030045P18Rik	ENSMUST00000214947	lincRNA		10	1	45828718	1938
ENSMUSG00000113184	lincRNA	Gm49654	ENSMUST00000221438	lincRNA		12	-1	81720052	2223
ENSMUSG00000110874	lincRNA	D030045P18Rik	ENSMUST00000215085	lincRNA		10	1	45837880	2186
ENSMUSG00000022351	protein_coding	Sqle	ENSMUST00000100640	protein_coding		15	1	59315107	2636
ENSMUSG00000110841	transcribed_processed_pseudogene	Gpx4-ps2	ENSMUST00000214811	transcribed_processed_pseudogene		10	1	45875291	555
ENSMUSG00000110841	transcribed_processed_pseudogene	Gpx4-ps2	ENSMUST00000217344	processed_transcript		10	1	45875305	782
ENSMUSG00000039458	protein_coding	Mtmr12	ENSMUST00000071993	protein_coding		15	1	12205085	3351
ENSMUSG00000006649	protein_coding	Nphs1	ENSMUST00000123880	retained_intron		7	1	30474508	664
ENSMUSG00000022351	protein_coding	Sqle	ENSMUST00000161953	retained_intron		15	1	59325543	1265
ENSMUSG00000006649	protein_coding	Nphs1	ENSMUST00000149086	nonsense_mediated_decay		7	1	30477865	752
ENSMUSG00000027463	protein_coding	Slc52a3	ENSMUST00000109858	protein_coding		2	1	151999897	2094
ENSMUSG00000031562	protein_coding	Dctd	ENSMUST00000174278	protein_coding	principal1	8	1	48099092	799
ENSMUSG00000039458	protein_coding	Mtmr12	ENSMUST00000174418	nonsense_mediated_decay		15	1	12205104	4359
ENSMUSG00000006649	protein_coding	Nphs1	ENSMUST00000131004	retained_intron		7	1	30484915	1987
ENSMUSG00000045751	protein_coding	Mms22l	ENSMUST00000154349	retained_intron		4	1	24505162	3603
ENSMUSG00000027463	protein_coding	Slc52a3	ENSMUST00000109859	protein_coding		2	1	151996511	2204
ENSMUSG00000039458	protein_coding	Mtmr12	ENSMUST00000174160	nonsense_mediated_decay		15	1	12205118	4489
ENSMUSG00000045751	protein_coding	Mms22l	ENSMUST00000131282	nonsense_mediated_decay		4	1	24507434	3552
ENSMUSG00000020019	protein_coding	Ntn4	ENSMUST00000020204	protein_coding	principal1	10	1	93641049	3646
ENSMUSG00000087009	antisense	Nphs1os	ENSMUST00000152625	antisense		7	-1	30465591	1339
ENSMUSG00000038459	protein_coding	Abhd17c	ENSMUST00000117085	protein_coding	principal1	7	-1	84151893	2238
ENSMUSG00000045751	protein_coding	Mms22l	ENSMUST00000154496	protein_coding		4	1	24536348	516
ENSMUSG00000090159	processed_pseudogene	Gm8580	ENSMUST00000160295	processed_pseudogene		10	-1	93665846	464
ENSMUSG00000083249	unprocessed_pseudogene	Gm14623	ENSMUST00000121398	unprocessed_pseudogene		X	1	55862223	603
ENSMUSG00000045751	protein_coding	Mms22l	ENSMUST00000123984	processed_transcript		4	1	24578848	738
ENSMUSG00000081089	unprocessed_pseudogene	Gm14624	ENSMUST00000117746	unprocessed_pseudogene		X	1	55904723	192
ENSMUSG00000039458	protein_coding	Mtmr12	ENSMUST00000173071	processed_transcript		15	1	12223354	772
ENSMUSG00000052062	protein_coding	Pard3b	ENSMUST00000075374	protein_coding	principal2	1	1	61638824	8392
ENSMUSG00000099918	processed_pseudogene	Gm28066	ENSMUST00000188657	processed_pseudogene		1	1	80949426	472
ENSMUSG00000118650	unprocessed_pseudogene	BX001028.1	ENSMUST00000239460	unprocessed_pseudogene		X	-1	55959872	417
ENSMUSG00000031562	protein_coding	Dctd	ENSMUST00000170263	protein_coding	principal1	8	1	48109958	2096
ENSMUSG00000038459	protein_coding	Abhd17c	ENSMUST00000131505	processed_transcript		7	-1	84147815	357
ENSMUSG00000082606	unprocessed_pseudogene	Gm14638	ENSMUST00000121338	unprocessed_pseudogene		X	1	56129658	216
ENSMUSG00000038459	protein_coding	Abhd17c	ENSMUST00000208271	retained_intron		7	-1	84151670	2580
ENSMUSG00000097584	lincRNA	1700125G22Rik	ENSMUST00000181124	lincRNA		3	1	27154026	861
ENSMUSG00000085946	antisense	AA387200	ENSMUST00000147463	antisense		2	-1	152076808	1177
ENSMUSG00000105735	TEC	4933415J04Rik	ENSMUST00000195895	TEC		5	1	112640335	1301
ENSMUSG00000052062	protein_coding	Pard3b	ENSMUST00000129030	retained_intron		1	1	61638875	2400
ENSMUSG00000092490	transcribed_unprocessed_pseudogene	Gm20482	ENSMUST00000172746	processed_transcript		7	-1	8862851	1644
ENSMUSG00000065987	protein_coding	Cd209b	ENSMUST00000084086	protein_coding	principal4	8	-1	3926833	2039
ENSMUSG00000105152	lincRNA	Gm42864	ENSMUST00000198371	lincRNA		5	1	112649367	1436
ENSMUSG00000092490	transcribed_unprocessed_pseudogene	Gm20482	ENSMUST00000174729	transcribed_unprocessed_pseudogene		7	-1	8862652	825
ENSMUSG00000031562	protein_coding	Dctd	ENSMUST00000033966	protein_coding	principal1	8	1	48110013	2072
ENSMUSG00000104807	lincRNA	Gm42865	ENSMUST00000197981	lincRNA		5	1	112675375	613
ENSMUSG00000035901	protein_coding	Dennd5a	ENSMUST00000130354	retained_intron		7	-1	109896699	1493
ENSMUSG00000052062	protein_coding	Pard3b	ENSMUST00000188325	retained_intron		1	1	61638886	4608
ENSMUSG00000052062	protein_coding	Pard3b	ENSMUST00000046673	protein_coding		1	1	61639243	3426
ENSMUSG00000052062	protein_coding	Pard3b	ENSMUST00000094906	protein_coding	alternative2	1	1	61639243	7676
ENSMUSG00000016984	protein_coding	Etaa1	ENSMUST00000076661	protein_coding	principal1	11	-1	17953875	4185
ENSMUSG00000109722	antisense	Gm10578	ENSMUST00000209747	antisense		7	1	137234683	636
ENSMUSG00000104540	processed_pseudogene	Gm3527	ENSMUST00000198905	processed_pseudogene		5	1	18350348	460
ENSMUSG00000031831	protein_coding	Dnaaf1	ENSMUST00000093100	protein_coding	principal1	8	1	119575235	2821
ENSMUSG00000031562	protein_coding	Dctd	ENSMUST00000174818	nonsense_mediated_decay		8	1	48110162	2493
ENSMUSG00000065987	protein_coding	Cd209b	ENSMUST00000171635	protein_coding	alternative2	8	-1	3926833	1000
ENSMUSG00000109722	antisense	Gm10578	ENSMUST00000211070	antisense		7	1	137234683	2876
ENSMUSG00000113062	processed_pseudogene	Gm48895	ENSMUST00000221016	processed_pseudogene		12	1	24760225	394
ENSMUSG00000096750	protein_coding	Gm11757	ENSMUST00000107321	protein_coding	principal2	4	-1	73891112	1324
ENSMUSG00000085400	antisense	Pard3bos3	ENSMUST00000147177	antisense		1	-1	62499261	862
ENSMUSG00000097016	bidirectional_promoter_lncRNA	Gm26708	ENSMUST00000208101	bidirectional_promoter_lncRNA		7	1	84152140	605
ENSMUSG00000103656	TEC	Gm37205	ENSMUST00000194820	TEC		1	1	61654423	2736
ENSMUSG00000114076	lincRNA	Gm48896	ENSMUST00000222531	lincRNA		12	1	24762341	316
ENSMUSG00000096750	protein_coding	Gm11757	ENSMUST00000107320	protein_coding	alternative2	4	-1	73891112	936
ENSMUSG00000097016	bidirectional_promoter_lncRNA	Gm26708	ENSMUST00000208236	bidirectional_promoter_lncRNA		7	1	84152147	1624
ENSMUSG00000103860	IG_V_pseudogene	Gm37418	ENSMUST00000195031	IG_V_pseudogene		12	-1	113725196	274
ENSMUSG00000057554	protein_coding	Lgals8	ENSMUST00000124888	protein_coding	principal1	13	-1	12464944	2843
ENSMUSG00000097016	bidirectional_promoter_lncRNA	Gm26708	ENSMUST00000180424	bidirectional_promoter_lncRNA		7	1	84152358	1427
ENSMUSG00000057554	protein_coding	Lgals8	ENSMUST00000133143	retained_intron		13	-1	12448736	2062
ENSMUSG00000065987	protein_coding	Cd209b	ENSMUST00000188386	protein_coding	alternative2	8	-1	3926813	972
ENSMUSG00000031562	protein_coding	Dctd	ENSMUST00000173991	retained_intron		8	1	48110165	786
ENSMUSG00000038811	protein_coding	Gngt2	ENSMUST00000107712	protein_coding	principal1	11	1	95837216	498
ENSMUSG00000031562	protein_coding	Dctd	ENSMUST00000098773	processed_transcript		8	1	48110189	1126
ENSMUSG00000057554	protein_coding	Lgals8	ENSMUST00000143693	protein_coding		13	-1	12461493	2457
ENSMUSG00000040891	protein_coding	Foxa3	ENSMUST00000036018	protein_coding	principal1	7	-1	19023538	2037
ENSMUSG00000031562	protein_coding	Dctd	ENSMUST00000174379	protein_coding		8	1	48110211	381
ENSMUSG00000057554	protein_coding	Lgals8	ENSMUST00000135166	protein_coding		13	-1	12461506	2416
ENSMUSG00000042869	protein_coding	Olfr1370	ENSMUST00000215357	protein_coding	principal1	13	-1	21074947	4285
ENSMUSG00000074342	protein_coding	I830077J02Rik	ENSMUST00000098758	protein_coding	principal1	3	-1	105932664	2599
ENSMUSG00000038690	protein_coding	Atp5j2	ENSMUST00000161741	protein_coding	principal1	5	-1	145192062	955
ENSMUSG00000113018	processed_pseudogene	Gm9318	ENSMUST00000222444	processed_pseudogene		12	-1	24776683	438
ENSMUSG00000042869	protein_coding	Olfr1370	ENSMUST00000213848	processed_transcript		13	-1	21074947	4114
ENSMUSG00000042869	protein_coding	Olfr1370	ENSMUST00000215806	protein_coding	principal1	13	-1	21074947	4322
ENSMUSG00000085312	lincRNA	Gm12763	ENSMUST00000151344	lincRNA		7	1	33653440	1939
ENSMUSG00000086468	antisense	Etaa1os	ENSMUST00000140161	antisense		11	1	17953970	550
ENSMUSG00000042869	protein_coding	Olfr1370	ENSMUST00000058168	protein_coding	principal1	13	-1	21073299	951
ENSMUSG00000057614	protein_coding	Gnai1	ENSMUST00000074694	protein_coding	principal1	5	-1	18360355	3135
ENSMUSG00000074342	protein_coding	I830077J02Rik	ENSMUST00000196099	nonsense_mediated_decay		3	-1	105928016	477
ENSMUSG00000086468	antisense	Etaa1os	ENSMUST00000148496	antisense		11	1	17954004	388
ENSMUSG00000074342	protein_coding	I830077J02Rik	ENSMUST00000126230	retained_intron		3	-1	105932616	427
ENSMUSG00000054263	protein_coding	Lifr	ENSMUST00000067190	protein_coding	principal3	15	1	7129559	4143
ENSMUSG00000060404	protein_coding	Olfr1369-ps1	ENSMUST00000213326	protein_coding	principal1	13	1	21111483	3707
ENSMUSG00000060404	protein_coding	Olfr1369-ps1	ENSMUST00000213922	protein_coding	principal1	13	1	21111553	3930
ENSMUSG00000094217	unprocessed_pseudogene	Gm20794	ENSMUST00000177626	unprocessed_pseudogene		Y	-1	60481481	628
ENSMUSG00000057554	protein_coding	Lgals8	ENSMUST00000099820	protein_coding	principal1	13	-1	12461503	2736
ENSMUSG00000060404	protein_coding	Olfr1369-ps1	ENSMUST00000215941	protein_coding	principal1	13	1	21111548	3597
ENSMUSG00000060404	protein_coding	Olfr1369-ps1	ENSMUST00000215207	protein_coding	principal1	13	1	21111548	3794
ENSMUSG00000078612	protein_coding	Fyb2	ENSMUST00000106804	protein_coding	alternative2	4	1	104913524	3068
ENSMUSG00000060404	protein_coding	Olfr1369-ps1	ENSMUST00000079050	protein_coding	principal1	13	1	21115694	954
ENSMUSG00000054263	protein_coding	Lifr	ENSMUST00000226826	processed_transcript		15	1	7129567	299
ENSMUSG00000078612	protein_coding	Fyb2	ENSMUST00000106803	protein_coding	principal2	4	1	104913456	3136
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000098853	protein_coding	principal1	7	1	4740115	2189
ENSMUSG00000057554	protein_coding	Lgals8	ENSMUST00000144283	protein_coding		13	-1	12461495	1148
ENSMUSG00000071522	protein_coding	Olfr263	ENSMUST00000215804	protein_coding	principal1	13	1	21129639	3963
ENSMUSG00000031832	protein_coding	Taf1c	ENSMUST00000212929	retained_intron		8	-1	119605206	3474
ENSMUSG00000100057	lincRNA	Gm28690	ENSMUST00000190325	lincRNA		Y	-1	60560378	622
ENSMUSG00000100057	lincRNA	Gm28690	ENSMUST00000188076	lincRNA		Y	-1	60560378	437
ENSMUSG00000083791	processed_pseudogene	Gm12721	ENSMUST00000120621	processed_pseudogene		4	-1	104970129	268
ENSMUSG00000087638	antisense	Gm11773	ENSMUST00000138256	antisense		11	1	120831029	497
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000135541	retained_intron		7	1	4740153	396
ENSMUSG00000054263	protein_coding	Lifr	ENSMUST00000164529	protein_coding	alternative2	15	1	7129572	2844
ENSMUSG00000101592	lincRNA	Gm28689	ENSMUST00000187441	lincRNA		Y	-1	60585619	174
ENSMUSG00000038811	protein_coding	Gngt2	ENSMUST00000107714	protein_coding	principal1	11	1	95842295	558
ENSMUSG00000068335	protein_coding	Dok1	ENSMUST00000089651	protein_coding	principal1	6	-1	83033471	1807
ENSMUSG00000057554	protein_coding	Lgals8	ENSMUST00000155871	retained_intron		13	-1	12456523	579
ENSMUSG00000071522	protein_coding	Olfr263	ENSMUST00000096006	protein_coding	principal1	13	1	21132698	1087
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000130215	protein_coding		7	1	4740156	767
ENSMUSG00000096333	protein_coding	Gm13871	ENSMUST00000107319	protein_coding	principal2	4	-1	73905953	1324
ENSMUSG00000057554	protein_coding	Lgals8	ENSMUST00000135060	retained_intron		13	-1	12455014	441
ENSMUSG00000092573	unprocessed_pseudogene	Vmn2r-ps43	ENSMUST00000173798	unprocessed_pseudogene		7	-1	8885651	2473
ENSMUSG00000038690	protein_coding	Atp5j2	ENSMUST00000162360	nonsense_mediated_decay		5	-1	145191592	607
ENSMUSG00000057554	protein_coding	Lgals8	ENSMUST00000152478	processed_transcript		13	-1	12461047	289
ENSMUSG00000054263	protein_coding	Lifr	ENSMUST00000226934	nonsense_mediated_decay		15	1	7140542	3891
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000108582	protein_coding	principal1	7	1	4740167	2774
ENSMUSG00000096333	protein_coding	Gm13871	ENSMUST00000107318	protein_coding	alternative2	4	-1	73905953	936
ENSMUSG00000068335	protein_coding	Dok1	ENSMUST00000149918	nonsense_mediated_decay		6	-1	83033468	1966
ENSMUSG00000038690	protein_coding	Atp5j2	ENSMUST00000037056	protein_coding		5	-1	145191592	540
ENSMUSG00000054263	protein_coding	Lifr	ENSMUST00000226471	protein_coding	principal3	15	1	7140542	3392
ENSMUSG00000057554	protein_coding	Lgals8	ENSMUST00000099821	protein_coding	principal1	13	-1	12461738	2792
ENSMUSG00000038690	protein_coding	Atp5j2	ENSMUST00000161845	protein_coding		5	-1	145191511	510
ENSMUSG00000107869	processed_pseudogene	Gm29848	ENSMUST00000203107	processed_pseudogene		6	1	67022177	295
ENSMUSG00000068335	protein_coding	Dok1	ENSMUST00000204900	protein_coding		6	-1	83032561	348
ENSMUSG00000100609	lincRNA	Gm28687	ENSMUST00000187203	lincRNA		Y	-1	60625558	1494
ENSMUSG00000110361	processed_pseudogene	Gm8291	ENSMUST00000209635	processed_pseudogene		8	-1	35053383	1261
ENSMUSG00000054263	protein_coding	Lifr	ENSMUST00000227727	protein_coding	alternative2	15	1	7140549	2489
ENSMUSG00000096826	protein_coding	Ccl27b	ENSMUST00000177785	protein_coding	principal1	4	1	42655251	418
ENSMUSG00000110130	lincRNA	Gm34419	ENSMUST00000211383	lincRNA		8	1	35094545	1387
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000108583	protein_coding	principal1	7	1	4740185	2177
ENSMUSG00000038690	protein_coding	Atp5j2	ENSMUST00000200584	retained_intron		5	-1	145191528	2101
ENSMUSG00000100609	lincRNA	Gm28687	ENSMUST00000189587	lincRNA		Y	-1	60625105	437
ENSMUSG00000045474	protein_coding	Olfr1368	ENSMUST00000216039	protein_coding	principal1	13	-1	21145867	1389
ENSMUSG00000105510	TEC	Gm43815	ENSMUST00000197676	TEC		5	-1	72555229	990
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000129927	retained_intron		7	1	4741635	763
ENSMUSG00000054263	protein_coding	Lifr	ENSMUST00000171588	protein_coding	principal3	15	1	7154353	9655
ENSMUSG00000097106	processed_pseudogene	Rpl31-ps23	ENSMUST00000180440	processed_pseudogene		8	-1	35133532	388
ENSMUSG00000045474	protein_coding	Olfr1368	ENSMUST00000055298	protein_coding	principal1	13	-1	21143081	1064
ENSMUSG00000028381	protein_coding	Ugcg	ENSMUST00000030074	protein_coding	principal1	4	1	59189257	4012
ENSMUSG00000041828	protein_coding	Abca8a	ENSMUST00000100287	protein_coding	alternative2	11	-1	110095978	5619
ENSMUSG00000090342	protein_coding	Vmn2r46	ENSMUST00000235334	unprocessed_pseudogene		7	-1	9770571	2550
ENSMUSG00000090342	protein_coding	Vmn2r46	ENSMUST00000171523	protein_coding	principal1	7	-1	9770571	2430
ENSMUSG00000040649	protein_coding	Rimklb	ENSMUST00000146274	nonsense_mediated_decay		6	-1	122466587	1372
ENSMUSG00000038811	protein_coding	Gngt2	ENSMUST00000107711	protein_coding	principal1	11	1	95842309	563
ENSMUSG00000055027	protein_coding	Smyd1	ENSMUST00000074301	protein_coding	alternative1	6	-1	71262281	3361
ENSMUSG00000028381	protein_coding	Ugcg	ENSMUST00000133996	processed_transcript		4	1	59189558	654
ENSMUSG00000110306	unprocessed_pseudogene	Gm18192	ENSMUST00000210174	unprocessed_pseudogene		7	-1	9792902	941
ENSMUSG00000040649	protein_coding	Rimklb	ENSMUST00000135320	processed_transcript		6	-1	122452732	429
ENSMUSG00000041828	protein_coding	Abca8a	ENSMUST00000106662	protein_coding		11	-1	110095937	484
ENSMUSG00000028381	protein_coding	Ugcg	ENSMUST00000128227	processed_transcript		4	1	59211720	406
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000160480	nonsense_mediated_decay		7	1	4741850	1270
ENSMUSG00000101998	unprocessed_pseudogene	Gm21530	ENSMUST00000190506	unprocessed_pseudogene		Y	-1	62981165	694
ENSMUSG00000075128	protein_coding	Olfr1177-ps	ENSMUST00000216713	protein_coding	principal5	2	-1	88346492	2821
ENSMUSG00000026946	protein_coding	Nmi	ENSMUST00000028314	protein_coding	principal1	2	-1	51973224	1291
ENSMUSG00000038811	protein_coding	Gngt2	ENSMUST00000100532	protein_coding	principal1	11	1	95842668	573
ENSMUSG00000113104	antisense	Gm47806	ENSMUST00000220690	antisense		13	-1	21187556	1127
ENSMUSG00000038866	protein_coding	Zcchc2	ENSMUST00000118196	protein_coding	principal4	1	1	105990406	5796
ENSMUSG00000041828	protein_coding	Abca8a	ENSMUST00000146635	protein_coding		11	-1	110075657	631
ENSMUSG00000075128	protein_coding	Olfr1177-ps	ENSMUST00000137895	protein_coding	alternative2	2	-1	88344727	921
ENSMUSG00000090864	protein_coding	Vmn2r40	ENSMUST00000171942	protein_coding	principal1	7	-1	8931435	3554
ENSMUSG00000099975	transcribed_unprocessed_pseudogene	Gm21617	ENSMUST00000188297	transcribed_unprocessed_pseudogene		Y	-1	63055871	691
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000136177	retained_intron		7	1	4742324	692
ENSMUSG00000040025	protein_coding	Ythdf2	ENSMUST00000152796	protein_coding	principal1	4	-1	132212303	4129
ENSMUSG00000041828	protein_coding	Abca8a	ENSMUST00000129810	processed_transcript		11	-1	110070379	675
ENSMUSG00000028381	protein_coding	Ugcg	ENSMUST00000155153	processed_transcript		4	1	59212656	1034
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000152500	retained_intron		7	1	4742454	892
ENSMUSG00000111182	lincRNA	Gm35430	ENSMUST00000214686	lincRNA		10	1	46228639	617
ENSMUSG00000099783	unprocessed_pseudogene	Gm28589	ENSMUST00000186991	unprocessed_pseudogene		Y	-1	63085433	615
ENSMUSG00000038811	protein_coding	Gngt2	ENSMUST00000036088	protein_coding	principal1	11	1	95842670	1587
ENSMUSG00000111182	lincRNA	Gm35430	ENSMUST00000214146	lincRNA		10	1	46228639	472
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000130200	retained_intron		7	1	4742657	595
ENSMUSG00000111182	lincRNA	Gm35430	ENSMUST00000215053	lincRNA		10	1	46232120	341
ENSMUSG00000101993	lincRNA	Gm20987	ENSMUST00000191165	lincRNA		Y	-1	60647732	174
ENSMUSG00000111182	lincRNA	Gm35430	ENSMUST00000217441	lincRNA		10	1	46300817	1321
ENSMUSG00000109978	processed_pseudogene	Gm45530	ENSMUST00000211658	processed_pseudogene		7	-1	8943954	225
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000152431	retained_intron		7	1	4742744	569
ENSMUSG00000041828	protein_coding	Abca8a	ENSMUST00000154849	processed_transcript		11	-1	110065373	560
ENSMUSG00000026946	protein_coding	Nmi	ENSMUST00000112705	protein_coding	principal1	2	-1	51973016	1130
ENSMUSG00000038866	protein_coding	Zcchc2	ENSMUST00000119166	protein_coding	alternative2	1	1	105990689	6368
ENSMUSG00000038811	protein_coding	Gngt2	ENSMUST00000107709	protein_coding	principal1	11	1	95843232	587
ENSMUSG00000059851	protein_coding	Kmt5c	ENSMUST00000128018	protein_coding		7	1	4745808	571
ENSMUSG00000041828	protein_coding	Abca8a	ENSMUST00000141279	processed_transcript		11	-1	110030081	299
ENSMUSG00000055027	protein_coding	Smyd1	ENSMUST00000114186	protein_coding	principal3	6	-1	71262253	3292
ENSMUSG00000040025	protein_coding	Ythdf2	ENSMUST00000085181	protein_coding		4	-1	132212091	955
ENSMUSG00000038811	protein_coding	Gngt2	ENSMUST00000107708	protein_coding	principal1	11	1	95843609	629
ENSMUSG00000040649	protein_coding	Rimklb	ENSMUST00000068242	protein_coding	principal1	6	-1	122486505	4725
ENSMUSG00000038866	protein_coding	Zcchc2	ENSMUST00000186983	protein_coding		1	1	106004122	3455
ENSMUSG00000078735	protein_coding	Il11ra2	ENSMUST00000238770	protein_coding	principal1	4	-1	42665763	1954
ENSMUSG00000040025	protein_coding	Ythdf2	ENSMUST00000165072	protein_coding		4	-1	132210809	520
ENSMUSG00000038866	protein_coding	Zcchc2	ENSMUST00000188954	protein_coding		1	1	106004137	770
ENSMUSG00000078735	protein_coding	Il11ra2	ENSMUST00000108006	protein_coding	principal1	4	-1	42661893	1299
ENSMUSG00000099380	lincRNA	Gm28130	ENSMUST00000186321	lincRNA		Y	-1	29561895	1498
ENSMUSG00000040649	protein_coding	Rimklb	ENSMUST00000204731	protein_coding		6	-1	122466535	3039
ENSMUSG00000040025	protein_coding	Ythdf2	ENSMUST00000102570	retained_intron		4	-1	132212105	2536
ENSMUSG00000104718	lincRNA	Gm31752	ENSMUST00000199456	lincRNA		5	-1	18490194	856
ENSMUSG00000040649	protein_coding	Rimklb	ENSMUST00000143701	processed_transcript		6	-1	122472554	466
ENSMUSG00000041828	protein_coding	Abca8a	ENSMUST00000046223	protein_coding	principal2	11	-1	110095937	5614
ENSMUSG00000099935	unprocessed_pseudogene	Gm21918	ENSMUST00000190310	unprocessed_pseudogene		Y	1	60682607	696
ENSMUSG00000084315	unprocessed_pseudogene	Vmn1r-ps128	ENSMUST00000121211	unprocessed_pseudogene		13	1	23124596	1080
ENSMUSG00000109034	unprocessed_pseudogene	Gm44960	ENSMUST00000207403	unprocessed_pseudogene		8	1	4812530	141
ENSMUSG00000041828	protein_coding	Abca8a	ENSMUST00000106664	protein_coding	alternative2	11	-1	110095937	5617
ENSMUSG00000040649	protein_coding	Rimklb	ENSMUST00000205114	protein_coding		6	-1	122486439	354
ENSMUSG00000038866	protein_coding	Zcchc2	ENSMUST00000131830	nonsense_mediated_decay		1	1	106011744	601
ENSMUSG00000095210	IG_V_gene	Ighv5-9-1	ENSMUST00000192264	IG_V_gene	principal5	12	-1	113736630	413
ENSMUSG00000114084	processed_pseudogene	Gm48897	ENSMUST00000223420	processed_pseudogene		12	1	24779173	295
ENSMUSG00000099380	lincRNA	Gm28130	ENSMUST00000187335	lincRNA		Y	-1	29561443	621
ENSMUSG00000099380	lincRNA	Gm28130	ENSMUST00000187950	lincRNA		Y	-1	29561443	437
ENSMUSG00000055027	protein_coding	Smyd1	ENSMUST00000114188	protein_coding		6	-1	71322233	2064
ENSMUSG00000093962	protein_coding	Gm11756	ENSMUST00000107310	protein_coding	principal5	4	-1	73920760	1312
ENSMUSG00000040649	protein_coding	Rimklb	ENSMUST00000204045	protein_coding		6	-1	122498761	356
ENSMUSG00000055027	protein_coding	Smyd1	ENSMUST00000173730	protein_coding		6	-1	71216874	428
ENSMUSG00000095210	IG_V_gene	Ighv5-9-1	ENSMUST00000103452	IG_V_gene	alternative2	12	-1	113736570	350
ENSMUSG00000093962	protein_coding	Gm11756	ENSMUST00000107312	protein_coding	alternative2	4	-1	73920760	924
ENSMUSG00000089783	transcribed_unprocessed_pseudogene	Gm454	ENSMUST00000239384	transcribed_unprocessed_pseudogene		5	-1	138207186	686
ENSMUSG00000055093	processed_pseudogene	Gm8430	ENSMUST00000119780	processed_pseudogene		6	1	122456904	471
ENSMUSG00000089783	transcribed_unprocessed_pseudogene	Gm454	ENSMUST00000160126	processed_transcript		5	-1	138207310	625
ENSMUSG00000115020	protein_coding	Vmn1r218	ENSMUST00000227050	protein_coding	principal2	13	1	23133155	10364
ENSMUSG00000026946	protein_coding	Nmi	ENSMUST00000145656	protein_coding		2	-1	51973494	792
ENSMUSG00000109381	TEC	Gm44826	ENSMUST00000207648	TEC		7	-1	84210514	2332
ENSMUSG00000115020	protein_coding	Vmn1r218	ENSMUST00000227160	protein_coding	alternative2	13	1	23133155	9558
ENSMUSG00000117609	unprocessed_pseudogene	Gm50007	ENSMUST00000234453	unprocessed_pseudogene		17	-1	26251445	96
ENSMUSG00000055027	protein_coding	Smyd1	ENSMUST00000129630	protein_coding		6	-1	71262232	376
ENSMUSG00000103446	IG_V_pseudogene	Gm38203	ENSMUST00000191815	IG_V_pseudogene		12	-1	113745889	245
ENSMUSG00000109091	lincRNA	Gm44827	ENSMUST00000207963	lincRNA		7	-1	84232919	2229
ENSMUSG00000115020	protein_coding	Vmn1r218	ENSMUST00000227741	protein_coding	alternative2	13	1	23133155	9624
ENSMUSG00000115020	protein_coding	Vmn1r218	ENSMUST00000226692	protein_coding	principal2	13	1	23133155	10430
ENSMUSG00000030491	protein_coding	Tdrd12	ENSMUST00000193633	protein_coding	principal1	7	-1	35537537	3651
ENSMUSG00000115020	protein_coding	Vmn1r218	ENSMUST00000228348	processed_transcript		13	1	23133155	8434
ENSMUSG00000115020	protein_coding	Vmn1r218	ENSMUST00000074992	protein_coding	principal2	13	1	23136485	897
ENSMUSG00000055027	protein_coding	Smyd1	ENSMUST00000173297	protein_coding		6	-1	71322206	947
ENSMUSG00000030491	protein_coding	Tdrd12	ENSMUST00000187190	protein_coding		7	-1	35537538	3341
ENSMUSG00000106338	lincRNA	Gm43645	ENSMUST00000200129	lincRNA		5	1	138207508	341
ENSMUSG00000103033	IG_V_gene	Ighv5-12-4	ENSMUST00000195381	IG_V_gene	principal1	12	-1	113762708	353
ENSMUSG00000030491	protein_coding	Tdrd12	ENSMUST00000205407	protein_coding		7	-1	35537693	1412
ENSMUSG00000083757	transcribed_processed_pseudogene	Rps15a-ps4	ENSMUST00000229086	processed_transcript		4	-1	132220489	502
ENSMUSG00000095600	processed_pseudogene	Gm9457	ENSMUST00000180176	processed_pseudogene		8	-1	4813434	372
ENSMUSG00000083757	transcribed_processed_pseudogene	Rps15a-ps4	ENSMUST00000119415	transcribed_processed_pseudogene		4	-1	132220437	392
ENSMUSG00000109063	processed_pseudogene	Gm44961	ENSMUST00000207450	processed_pseudogene		8	-1	4821230	196
ENSMUSG00000026946	protein_coding	Nmi	ENSMUST00000145481	protein_coding	principal1	2	-1	51973004	1162
ENSMUSG00000048445	protein_coding	Ccdc57	ENSMUST00000056781	protein_coding	principal1	11	-1	120932872	3403
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000213285	protein_coding		8	1	81342558	3005
ENSMUSG00000087231	processed_transcript	E230016M11Rik	ENSMUST00000130657	bidirectional_promoter_lncRNA		6	1	67036599	1764
ENSMUSG00000103604	IG_V_pseudogene	Gm38205	ENSMUST00000192243	IG_V_pseudogene		12	-1	113768220	258
ENSMUSG00000026946	protein_coding	Nmi	ENSMUST00000123521	retained_intron		2	-1	51972970	487
ENSMUSG00000026946	protein_coding	Nmi	ENSMUST00000142868	protein_coding		2	-1	51952577	388
ENSMUSG00000087231	processed_transcript	E230016M11Rik	ENSMUST00000147548	bidirectional_promoter_lncRNA		6	1	67036605	698
ENSMUSG00000038618	protein_coding	Rassf7	ENSMUST00000046890	protein_coding	principal2	7	1	141215860	1525
ENSMUSG00000021326	protein_coding	Trim27	ENSMUST00000222544	protein_coding	principal1	13	1	21179445	4312
ENSMUSG00000021326	protein_coding	Trim27	ENSMUST00000124052	retained_intron		13	1	21179958	1750
ENSMUSG00000031832	protein_coding	Taf1c	ENSMUST00000093099	protein_coding	principal1	8	-1	119605222	3236
ENSMUSG00000030491	protein_coding	Tdrd12	ENSMUST00000032701	protein_coding		7	-1	35537745	1620
ENSMUSG00000087231	processed_transcript	E230016M11Rik	ENSMUST00000149889	retained_intron		6	1	67036655	2473
ENSMUSG00000087231	processed_transcript	E230016M11Rik	ENSMUST00000204847	retained_intron		6	1	67076760	992
ENSMUSG00000021326	protein_coding	Trim27	ENSMUST00000223065	protein_coding		13	1	21180224	2046
ENSMUSG00000021326	protein_coding	Trim27	ENSMUST00000221464	protein_coding		13	1	21181138	1400
ENSMUSG00000038618	protein_coding	Rassf7	ENSMUST00000127613	nonsense_mediated_decay		7	1	141215875	996
ENSMUSG00000048445	protein_coding	Ccdc57	ENSMUST00000150640	processed_transcript		11	-1	120873671	1164
ENSMUSG00000038618	protein_coding	Rassf7	ENSMUST00000209500	protein_coding	alternative2	7	1	141215894	1560
ENSMUSG00000030491	protein_coding	Tdrd12	ENSMUST00000206641	protein_coding		7	-1	35505008	543
ENSMUSG00000038498	protein_coding	Catsper1	ENSMUST00000043380	protein_coding	principal1	19	1	5335741	2188
ENSMUSG00000030491	protein_coding	Tdrd12	ENSMUST00000127472	protein_coding		7	-1	35537693	769
ENSMUSG00000053012	protein_coding	Krcc1	ENSMUST00000204436	protein_coding	principal1	6	1	71271677	1687
ENSMUSG00000038618	protein_coding	Rassf7	ENSMUST00000149548	processed_transcript		7	1	141215899	556
ENSMUSG00000002997	protein_coding	Prkar2b	ENSMUST00000003079	protein_coding	principal1	12	-1	32061235	1657
ENSMUSG00000048445	protein_coding	Ccdc57	ENSMUST00000143895	processed_transcript		11	-1	120885911	620
ENSMUSG00000038618	protein_coding	Rassf7	ENSMUST00000210993	protein_coding		7	1	141215962	628
ENSMUSG00000038498	protein_coding	Catsper1	ENSMUST00000235380	protein_coding		19	1	5336198	1539
ENSMUSG00000021326	protein_coding	Trim27	ENSMUST00000139287	nonsense_mediated_decay		13	1	21189855	683
ENSMUSG00000053012	protein_coding	Krcc1	ENSMUST00000205123	protein_coding		6	1	71271701	417
ENSMUSG00000031832	protein_coding	Taf1c	ENSMUST00000147964	nonsense_mediated_decay		8	-1	119605222	3309
ENSMUSG00000038618	protein_coding	Rassf7	ENSMUST00000133763	protein_coding		7	1	141215978	744
ENSMUSG00000021326	protein_coding	Trim27	ENSMUST00000124794	retained_intron		13	1	21189861	439
ENSMUSG00000031907	protein_coding	Zfp90	ENSMUST00000213045	nonsense_mediated_decay		8	1	106415327	3447
ENSMUSG00000038618	protein_coding	Rassf7	ENSMUST00000153081	protein_coding		7	1	141216203	661
ENSMUSG00000090700	protein_coding	Cyp4f40	ENSMUST00000235086	protein_coding	principal1	17	1	32658900	2210
ENSMUSG00000053012	protein_coding	Krcc1	ENSMUST00000168700	protein_coding	principal1	6	1	71272019	1749
ENSMUSG00000031832	protein_coding	Taf1c	ENSMUST00000131652	processed_transcript		8	-1	119599845	441
ENSMUSG00000031907	protein_coding	Zfp90	ENSMUST00000211958	processed_transcript		8	1	106415339	2639
ENSMUSG00000021326	protein_coding	Trim27	ENSMUST00000021761	protein_coding	principal1	13	1	21179931	4204
ENSMUSG00000038618	protein_coding	Rassf7	ENSMUST00000141804	protein_coding		7	1	141216635	823
ENSMUSG00000031832	protein_coding	Taf1c	ENSMUST00000144379	retained_intron		8	-1	119600713	698
ENSMUSG00000031832	protein_coding	Taf1c	ENSMUST00000126547	processed_transcript		8	-1	119601578	577
ENSMUSG00000027808	protein_coding	Serp1	ENSMUST00000029385	protein_coding	principal1	3	-1	58525892	4611
ENSMUSG00000038618	protein_coding	Rassf7	ENSMUST00000148975	protein_coding		7	1	141216700	295
ENSMUSG00000081378	processed_pseudogene	Rps13-ps4	ENSMUST00000117927	processed_pseudogene		8	-1	119602625	456
ENSMUSG00000038618	protein_coding	Rassf7	ENSMUST00000209760	retained_intron		7	1	141217638	338
ENSMUSG00000090700	protein_coding	Cyp4f40	ENSMUST00000165061	protein_coding	principal1	17	1	32659410	1858
ENSMUSG00000053012	protein_coding	Krcc1	ENSMUST00000080949	protein_coding	principal1	6	1	71282280	1393
ENSMUSG00000109826	processed_pseudogene	Gm45658	ENSMUST00000209197	processed_pseudogene		8	1	43804844	580
ENSMUSG00000036390	protein_coding	Gadd45a	ENSMUST00000043098	protein_coding	principal1	6	-1	67037406	1223
ENSMUSG00000090700	protein_coding	Cyp4f40	ENSMUST00000234995	retained_intron		17	1	32667610	430
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000197502	protein_coding	alternative2	3	1	54692807	2751
ENSMUSG00000050108	protein_coding	Bpifc	ENSMUST00000061699	protein_coding	principal1	10	-1	86011895	2714
ENSMUSG00000032615	protein_coding	Nt5m	ENSMUST00000149076	processed_transcript		11	1	59839447	1316
ENSMUSG00000013275	protein_coding	Slc41a1	ENSMUST00000132585	processed_transcript		1	1	131827493	372
ENSMUSG00000002997	protein_coding	Prkar2b	ENSMUST00000036497	protein_coding	principal1	12	-1	32061296	3378
ENSMUSG00000109993	lincRNA	Gm45659	ENSMUST00000209295	lincRNA		8	-1	43914604	564
ENSMUSG00000094107	protein_coding	Vmn2r47	ENSMUST00000170131	protein_coding	principal1	7	-1	9841325	2559
ENSMUSG00000032615	protein_coding	Nt5m	ENSMUST00000154699	processed_transcript		11	1	59839447	2220
ENSMUSG00000036390	protein_coding	Gadd45a	ENSMUST00000151958	retained_intron		6	-1	67037201	744
ENSMUSG00000050108	protein_coding	Bpifc	ENSMUST00000105304	protein_coding		10	-1	86011856	451
ENSMUSG00000036390	protein_coding	Gadd45a	ENSMUST00000204369	protein_coding		6	-1	67037364	716
ENSMUSG00000101390	unprocessed_pseudogene	Gm29420	ENSMUST00000187261	unprocessed_pseudogene		Y	-1	63122216	694
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000200441	protein_coding		3	1	54692823	2154
ENSMUSG00000036390	protein_coding	Gadd45a	ENSMUST00000204282	protein_coding		6	-1	67037251	460
ENSMUSG00000024266	protein_coding	Adad2	ENSMUST00000098361	protein_coding	principal1	8	1	119612747	1926
ENSMUSG00000036390	protein_coding	Gadd45a	ENSMUST00000128617	retained_intron		6	-1	67037186	703
ENSMUSG00000099699	lincRNA	Gm29421	ENSMUST00000185843	lincRNA		Y	1	63164534	1498
ENSMUSG00000056995	protein_coding	Olfr1178	ENSMUST00000214040	protein_coding	principal1	2	1	88387062	6480
ENSMUSG00000036390	protein_coding	Gadd45a	ENSMUST00000126194	retained_intron		6	-1	67037377	824
ENSMUSG00000099699	lincRNA	Gm29421	ENSMUST00000189077	lincRNA		Y	1	63164986	438
ENSMUSG00000002997	protein_coding	Prkar2b	ENSMUST00000146865	protein_coding		12	-1	32060589	3133
ENSMUSG00000056995	protein_coding	Olfr1178	ENSMUST00000217346	processed_transcript		2	1	88387253	5924
ENSMUSG00000056995	protein_coding	Olfr1178	ENSMUST00000219086	processed_transcript		2	1	88387256	103
ENSMUSG00000102635	TEC	Gm36638	ENSMUST00000193295	TEC		13	-1	101753205	400
ENSMUSG00000036390	protein_coding	Gadd45a	ENSMUST00000155041	retained_intron		6	-1	67037457	472
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000217122	protein_coding	alternative2	8	1	81342562	4392
ENSMUSG00000104214	TEC	Gm36638	ENSMUST00000192073	TEC		13	-1	101751888	2169
ENSMUSG00000056995	protein_coding	Olfr1178	ENSMUST00000075640	protein_coding	principal1	2	1	88391249	972
ENSMUSG00000109678	processed_pseudogene	Gm45626	ENSMUST00000210093	processed_pseudogene		8	-1	35150446	361
ENSMUSG00000031907	protein_coding	Zfp90	ENSMUST00000034382	protein_coding	principal1	8	1	106415339	2632
ENSMUSG00000031125	protein_coding	3830403N18Rik	ENSMUST00000033458	protein_coding	principal1	X	1	56136572	1022
ENSMUSG00000095565	IG_V_gene	Ighv2-9-1	ENSMUST00000180013	IG_V_gene	principal1	12	-1	113770302	369
ENSMUSG00000110314	lincRNA	Gm45625	ENSMUST00000209412	lincRNA		8	-1	35183886	650
ENSMUSG00000047842	protein_coding	Diras2	ENSMUST00000057442	protein_coding	principal1	13	-1	52531279	4786
ENSMUSG00000031907	protein_coding	Zfp90	ENSMUST00000212606	protein_coding		8	1	106415348	2685
ENSMUSG00000040165	protein_coding	Cd209c	ENSMUST00000044060	protein_coding	principal1	8	-1	3946863	1550
ENSMUSG00000035901	protein_coding	Dennd5a	ENSMUST00000106722	protein_coding	alternative1	7	-1	109960400	4862
ENSMUSG00000031907	protein_coding	Zfp90	ENSMUST00000212866	retained_intron		8	1	106415381	6731
ENSMUSG00000109856	processed_pseudogene	Gm19855	ENSMUST00000210145	processed_pseudogene		8	-1	44048369	249
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000199674	nonsense_mediated_decay		3	1	54692825	3700
ENSMUSG00000042772	protein_coding	Smg7	ENSMUST00000073441	protein_coding	principal3	1	-1	152902622	5767
ENSMUSG00000102378	TEC	Gm37972	ENSMUST00000193497	TEC		8	-1	44228545	379
ENSMUSG00000092178	unprocessed_pseudogene	Gm45351	ENSMUST00000210683	unprocessed_pseudogene		7	-1	9876966	2545
ENSMUSG00000031907	protein_coding	Zfp90	ENSMUST00000212874	protein_coding	principal1	8	1	106415399	2195
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000109901	protein_coding	principal3	12	1	105784694	4380
ENSMUSG00000084212	processed_pseudogene	Gm12225	ENSMUST00000117995	processed_pseudogene		11	1	54404140	298
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000199655	protein_coding		3	1	54692835	836
ENSMUSG00000020646	protein_coding	Mboat2	ENSMUST00000222198	protein_coding		12	1	24830879	436
ENSMUSG00000110409	bidirectional_promoter_lncRNA	Gm9908	ENSMUST00000211534	bidirectional_promoter_lncRNA		8	-1	44935159	448
ENSMUSG00000040165	protein_coding	Cd209c	ENSMUST00000208902	retained_intron		8	-1	3946053	681
ENSMUSG00000078151	processed_pseudogene	Gm12226	ENSMUST00000144172	processed_pseudogene		11	1	54401092	876
ENSMUSG00000040165	protein_coding	Cd209c	ENSMUST00000208622	nonsense_mediated_decay		8	-1	3946053	573
ENSMUSG00000035901	protein_coding	Dennd5a	ENSMUST00000080437	protein_coding	principal3	7	-1	109960470	5004
ENSMUSG00000037463	protein_coding	Fbxo27	ENSMUST00000039998	protein_coding	principal3	7	1	28692849	1946
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000197568	retained_intron		3	1	54692858	364
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000168186	protein_coding		12	1	105784704	2436
ENSMUSG00000013275	protein_coding	Slc41a1	ENSMUST00000086559	protein_coding	principal1	1	1	131827977	4697
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000021535	nonsense_mediated_decay		12	1	105784704	3022
ENSMUSG00000040165	protein_coding	Cd209c	ENSMUST00000127592	processed_transcript		8	-1	3954746	652
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000200024	retained_intron		3	1	54692858	1341
ENSMUSG00000037463	protein_coding	Fbxo27	ENSMUST00000151227	protein_coding		7	1	28693039	309
ENSMUSG00000035901	protein_coding	Dennd5a	ENSMUST00000156858	retained_intron		7	-1	109897556	642
ENSMUSG00000032615	protein_coding	Nt5m	ENSMUST00000102695	protein_coding	principal1	11	1	59848073	1306
ENSMUSG00000035901	protein_coding	Dennd5a	ENSMUST00000134331	retained_intron		7	-1	109900464	832
ENSMUSG00000040165	protein_coding	Cd209c	ENSMUST00000153915	processed_transcript		8	-1	3946884	481
ENSMUSG00000024846	protein_coding	Cst6	ENSMUST00000025764	protein_coding	principal1	19	-1	5349574	3951
ENSMUSG00000020332	protein_coding	Meikin	ENSMUST00000143919	retained_intron		11	1	54370652	1489
ENSMUSG00000018381	protein_coding	Abi3	ENSMUST00000059026	protein_coding	principal1	11	-1	95842409	4006
ENSMUSG00000030245	protein_coding	Golt1b	ENSMUST00000032372	protein_coding	principal1	6	1	142387221	2818
ENSMUSG00000019795	protein_coding	Pcmt1	ENSMUST00000161123	nonsense_mediated_decay		10	-1	7663264	2607
ENSMUSG00000024846	protein_coding	Cst6	ENSMUST00000237627	retained_intron		19	-1	5348579	376
ENSMUSG00000032615	protein_coding	Nt5m	ENSMUST00000137695	processed_transcript		11	1	59848104	1387
ENSMUSG00000013275	protein_coding	Slc41a1	ENSMUST00000146360	retained_intron		1	1	131842840	553
ENSMUSG00000035901	protein_coding	Dennd5a	ENSMUST00000154002	retained_intron		7	-1	109920650	3165
ENSMUSG00000024846	protein_coding	Cst6	ENSMUST00000238111	protein_coding		19	-1	5349357	432
ENSMUSG00000043833	processed_transcript	2900005J15Rik	ENSMUST00000128569	processed_transcript		5	1	25101458	1813
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000169387	nonsense_mediated_decay		8	1	81342562	3119
ENSMUSG00000043833	processed_transcript	2900005J15Rik	ENSMUST00000171190	processed_transcript		5	1	25100983	2025
ENSMUSG00000035901	protein_coding	Dennd5a	ENSMUST00000139579	processed_transcript		7	-1	109925050	453
ENSMUSG00000072889	protein_coding	Nfxl1	ENSMUST00000087216	protein_coding	principal1	5	-1	72559684	3712
ENSMUSG00000019373	protein_coding	Cops3	ENSMUST00000126489	processed_transcript		11	-1	59818687	583
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000215332	protein_coding	alternative2	8	1	81342562	5486
ENSMUSG00000035901	protein_coding	Dennd5a	ENSMUST00000151923	processed_transcript		7	-1	109960323	441
ENSMUSG00000030245	protein_coding	Golt1b	ENSMUST00000146508	processed_transcript		6	1	142387253	367
ENSMUSG00000018381	protein_coding	Abi3	ENSMUST00000131049	processed_transcript		11	-1	95842476	1816
ENSMUSG00000068487	processed_pseudogene	Ndufa11b	ENSMUST00000132879	processed_pseudogene		16	1	22053510	424
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000200450	retained_intron		3	1	54692858	1866
ENSMUSG00000100856	protein_coding	Gm21627	ENSMUST00000187768	protein_coding	principal1	Y	1	63228427	918
ENSMUSG00000022191	protein_coding	Drosha	ENSMUST00000090292	protein_coding	principal1	15	1	12824863	4519
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000199652	protein_coding		3	1	54692862	682
ENSMUSG00000018381	protein_coding	Abi3	ENSMUST00000137645	protein_coding		11	-1	95835890	733
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000042529	protein_coding	principal3	8	1	81715200	4120
ENSMUSG00000020484	protein_coding	Xbp1	ENSMUST00000063084	protein_coding		11	1	5520659	2129
ENSMUSG00000075127	protein_coding	Olfr1179	ENSMUST00000213157	protein_coding	principal1	2	-1	88406453	1309
ENSMUSG00000101544	unprocessed_pseudogene	Gm29422	ENSMUST00000188062	unprocessed_pseudogene		Y	-1	63316976	694
ENSMUSG00000018381	protein_coding	Abi3	ENSMUST00000143492	processed_transcript		11	-1	95842098	319
ENSMUSG00000118610	unprocessed_pseudogene	AC122861.1	ENSMUST00000239201	unprocessed_pseudogene		19	-1	5360520	163
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000200439	nonsense_mediated_decay		3	1	54693113	3753
ENSMUSG00000075127	protein_coding	Olfr1179	ENSMUST00000099825	protein_coding	principal1	2	-1	88402932	924
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000169116	protein_coding		8	1	81715201	2702
ENSMUSG00000020484	protein_coding	Xbp1	ENSMUST00000239150	protein_coding	principal1	11	1	5520995	1116
ENSMUSG00000037463	protein_coding	Fbxo27	ENSMUST00000108281	protein_coding	alternative2	7	1	28693144	1948
ENSMUSG00000100159	unprocessed_pseudogene	Gm28808	ENSMUST00000190978	unprocessed_pseudogene		Y	-1	63353594	313
ENSMUSG00000018585	protein_coding	Atox1	ENSMUST00000108857	protein_coding	principal1	11	-1	55461239	541
ENSMUSG00000094280	unprocessed_pseudogene	Vmn2r-ps51	ENSMUST00000177271	unprocessed_pseudogene		7	-1	9899743	2461
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000198745	retained_intron		3	1	54712238	660
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000109852	protein_coding	alternative2	8	1	81741306	4095
ENSMUSG00000037463	protein_coding	Fbxo27	ENSMUST00000108280	protein_coding		7	1	28694019	2031
ENSMUSG00000022191	protein_coding	Drosha	ENSMUST00000141706	processed_transcript		15	1	12824890	881
ENSMUSG00000020484	protein_coding	Xbp1	ENSMUST00000145588	retained_intron		11	1	5521005	987
ENSMUSG00000086191	antisense	Zfp652os	ENSMUST00000155531	antisense		11	-1	95712754	537
ENSMUSG00000101864	unprocessed_pseudogene	Gm21634	ENSMUST00000190775	unprocessed_pseudogene		Y	-1	63501598	694
ENSMUSG00000018585	protein_coding	Atox1	ENSMUST00000138412	processed_transcript		11	-1	55461197	327
ENSMUSG00000022191	protein_coding	Drosha	ENSMUST00000147647	processed_transcript		15	1	12824890	881
ENSMUSG00000081836	protein_coding	Olfr1180	ENSMUST00000217320	protein_coding	principal1	2	-1	88419137	2107
ENSMUSG00000026918	protein_coding	Brd3	ENSMUST00000028282	protein_coding	principal3	2	-1	27475398	5419
ENSMUSG00000037463	protein_coding	Fbxo27	ENSMUST00000127368	protein_coding		7	1	28696651	458
ENSMUSG00000072889	protein_coding	Nfxl1	ENSMUST00000135318	nonsense_mediated_decay		5	-1	72559645	3579
ENSMUSG00000100712	unprocessed_pseudogene	Gm28446	ENSMUST00000186508	unprocessed_pseudogene		Y	-1	63643068	694
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000172031	protein_coding	alternative2	8	1	81741306	8067
ENSMUSG00000022191	protein_coding	Drosha	ENSMUST00000156594	processed_transcript		15	1	12826127	699
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000170552	protein_coding	principal2	3	1	54693105	1968
ENSMUSG00000042772	protein_coding	Smg7	ENSMUST00000043560	protein_coding		1	-1	152878168	5792
ENSMUSG00000111754	processed_pseudogene	Gm19994	ENSMUST00000217086	processed_pseudogene		10	1	46670144	586
ENSMUSG00000081836	protein_coding	Olfr1180	ENSMUST00000216121	protein_coding	principal1	2	-1	88419151	2079
ENSMUSG00000093681	unprocessed_pseudogene	Vmn2r-ps52	ENSMUST00000176211	unprocessed_pseudogene		7	-1	9918863	612
ENSMUSG00000020484	protein_coding	Xbp1	ENSMUST00000149623	protein_coding		11	1	5521663	897
ENSMUSG00000050605	protein_coding	Zfp61	ENSMUST00000077780	protein_coding	principal1	7	-1	24299675	2480
ENSMUSG00000111499	processed_pseudogene	Gm47562	ENSMUST00000216234	processed_pseudogene		10	-1	46856502	150
ENSMUSG00000110003	processed_pseudogene	Gm45403	ENSMUST00000209453	processed_pseudogene		7	1	9918868	276
ENSMUSG00000081836	protein_coding	Olfr1180	ENSMUST00000099824	protein_coding	principal1	2	-1	88412689	1063
ENSMUSG00000020484	protein_coding	Xbp1	ENSMUST00000149159	protein_coding		11	1	5521923	1099
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000164870	processed_transcript		8	1	81767801	358
ENSMUSG00000110843	lincRNA	Gm35552	ENSMUST00000214355	lincRNA		10	-1	47102832	396
ENSMUSG00000072889	protein_coding	Nfxl1	ENSMUST00000149393	retained_intron		5	-1	72517347	1193
ENSMUSG00000027751	protein_coding	Supt20	ENSMUST00000029315	protein_coding		3	1	54692823	2112
ENSMUSG00000111419	lincRNA	Gm47568	ENSMUST00000214033	lincRNA		10	1	47024247	956
ENSMUSG00000050605	protein_coding	Zfp61	ENSMUST00000138924	processed_transcript		7	-1	24295711	944
ENSMUSG00000026918	protein_coding	Brd3	ENSMUST00000077737	protein_coding	principal3	2	-1	27475686	5272
ENSMUSG00000072889	protein_coding	Nfxl1	ENSMUST00000149340	retained_intron		5	-1	72522198	416
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000216036	processed_transcript		8	1	81770733	412
ENSMUSG00000111057	processed_pseudogene	Gm3442	ENSMUST00000216808	processed_pseudogene		10	1	47080534	710
ENSMUSG00000072889	protein_coding	Nfxl1	ENSMUST00000153882	retained_intron		5	-1	72524659	800
ENSMUSG00000050605	protein_coding	Zfp61	ENSMUST00000145131	protein_coding		7	-1	24299310	902
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000170160	protein_coding		8	1	81773113	2108
ENSMUSG00000117988	processed_pseudogene	Gm8663	ENSMUST00000237246	processed_pseudogene		19	1	37388407	946
ENSMUSG00000118211	processed_pseudogene	Gm46649	ENSMUST00000229520	processed_pseudogene		19	-1	37413847	406
ENSMUSG00000111719	processed_pseudogene	Gm19137	ENSMUST00000213790	processed_pseudogene		10	-1	47310575	1164
ENSMUSG00000050605	protein_coding	Zfp61	ENSMUST00000137342	retained_intron		7	-1	24295548	668
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000216387	processed_transcript		8	1	81844357	585
ENSMUSG00000111072	processed_pseudogene	Gm9068	ENSMUST00000217393	processed_pseudogene		10	-1	47325672	455
ENSMUSG00000072889	protein_coding	Nfxl1	ENSMUST00000074948	protein_coding		5	-1	72559599	1373
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000109851	protein_coding	alternative2	8	1	81856368	3906
ENSMUSG00000099520	lincRNA	Gm29061	ENSMUST00000185900	lincRNA		Y	1	63684343	1499
ENSMUSG00000112702	TEC	Gm47571	ENSMUST00000217715	TEC		10	1	47640123	412
ENSMUSG00000042772	protein_coding	Smg7	ENSMUST00000111836	protein_coding	alternative2	1	-1	152902646	3928
ENSMUSG00000050605	protein_coding	Zfp61	ENSMUST00000138619	processed_transcript		7	-1	24299298	457
ENSMUSG00000056458	protein_coding	Mok	ENSMUST00000084974	protein_coding		12	-1	110840930	1132
ENSMUSG00000035704	protein_coding	Alg8	ENSMUST00000098300	protein_coding	principal1	7	1	97371606	2039
ENSMUSG00000037940	protein_coding	Inpp4b	ENSMUST00000165821	retained_intron		8	1	81890319	682
ENSMUSG00000022191	protein_coding	Drosha	ENSMUST00000150211	retained_intron		15	1	12837350	3248
ENSMUSG00000112917	processed_pseudogene	Gm47331	ENSMUST00000218293	processed_pseudogene		10	1	47941841	3587
ENSMUSG00000099520	lincRNA	Gm29061	ENSMUST00000187026	lincRNA		Y	1	63684796	438
ENSMUSG00000020332	protein_coding	Meikin	ENSMUST00000094193	protein_coding	principal1	11	1	54370652	1433
ENSMUSG00000050605	protein_coding	Zfp61	ENSMUST00000139811	retained_intron		7	-1	24299401	1188
ENSMUSG00000022191	protein_coding	Drosha	ENSMUST00000141010	processed_transcript		15	1	12878708	588
ENSMUSG00000090732	processed_transcript	4930579O11Rik	ENSMUST00000168243	lincRNA		8	-1	81667072	672
ENSMUSG00000101119	lincRNA	Gm29060	ENSMUST00000185339	lincRNA		Y	-1	63691008	457
ENSMUSG00000072889	protein_coding	Nfxl1	ENSMUST00000134452	retained_intron		5	-1	72559412	884
ENSMUSG00000086952	lincRNA	Gm12596	ENSMUST00000124589	lincRNA		4	1	59260051	673
ENSMUSG00000050605	protein_coding	Zfp61	ENSMUST00000128421	processed_transcript		7	-1	24301232	747
ENSMUSG00000042772	protein_coding	Smg7	ENSMUST00000186692	processed_transcript		1	-1	152871158	574
ENSMUSG00000109773	lincRNA	Gm34474	ENSMUST00000209645	lincRNA		8	1	35218638	356
ENSMUSG00000111911	processed_pseudogene	Gm47332	ENSMUST00000218907	processed_pseudogene		10	1	47973431	266
ENSMUSG00000050605	protein_coding	Zfp61	ENSMUST00000206535	retained_intron		7	-1	24299637	1542
ENSMUSG00000090732	processed_transcript	4930579O11Rik	ENSMUST00000164687	antisense		8	-1	81667118	631
ENSMUSG00000050605	protein_coding	Zfp61	ENSMUST00000165241	protein_coding	principal1	7	-1	24295981	1668
ENSMUSG00000072889	protein_coding	Nfxl1	ENSMUST00000146761	retained_intron		5	-1	72559648	798
ENSMUSG00000026918	protein_coding	Brd3	ENSMUST00000138693	protein_coding		2	-1	27475654	2221
ENSMUSG00000042772	protein_coding	Smg7	ENSMUST00000186900	processed_transcript		1	-1	152849005	672
ENSMUSG00000112062	TEC	Gm47353	ENSMUST00000219040	TEC		10	-1	48411667	313
ENSMUSG00000022191	protein_coding	Drosha	ENSMUST00000169061	protein_coding	principal1	15	1	12824815	4570
ENSMUSG00000042772	protein_coding	Smg7	ENSMUST00000188937	retained_intron		1	-1	152848920	525
ENSMUSG00000106836	processed_pseudogene	Gm43578	ENSMUST00000201250	processed_pseudogene		6	-1	38365902	459
ENSMUSG00000028396	protein_coding	2310002L09Rik	ENSMUST00000149981	processed_transcript		4	-1	73941801	428
ENSMUSG00000072889	protein_coding	Nfxl1	ENSMUST00000198977	retained_intron		5	-1	72559623	4172
ENSMUSG00000111262	lincRNA	Gm47354	ENSMUST00000217071	lincRNA		10	-1	48536356	379
ENSMUSG00000103628	processed_pseudogene	Gm37361	ENSMUST00000194345	processed_pseudogene		3	-1	93100597	132
ENSMUSG00000026918	protein_coding	Brd3	ENSMUST00000154316	protein_coding		2	-1	27507662	2316
ENSMUSG00000090610	processed_pseudogene	Gm3571	ENSMUST00000170703	processed_pseudogene		10	1	93778660	1060
ENSMUSG00000035704	protein_coding	Alg8	ENSMUST00000147297	retained_intron		7	1	97386637	841
ENSMUSG00000026918	protein_coding	Brd3	ENSMUST00000130932	processed_transcript		2	-1	27475653	2893
ENSMUSG00000026918	protein_coding	Brd3	ENSMUST00000147736	protein_coding		2	-1	27475607	437
ENSMUSG00000035704	protein_coding	Alg8	ENSMUST00000130111	processed_transcript		7	1	97386894	899
ENSMUSG00000056458	protein_coding	Mok	ENSMUST00000070565	protein_coding	principal1	12	-1	110840939	1693
ENSMUSG00000095914	protein_coding	Vmn2r48	ENSMUST00000165611	protein_coding	principal1	7	-1	9953585	2568
ENSMUSG00000026918	protein_coding	Brd3	ENSMUST00000144758	processed_transcript		2	-1	27464582	563
ENSMUSG00000035704	protein_coding	Alg8	ENSMUST00000154107	processed_transcript		7	1	97387222	480
ENSMUSG00000031997	protein_coding	Trpc6	ENSMUST00000050433	protein_coding	principal1	9	1	8544142	3259
ENSMUSG00000028396	protein_coding	2310002L09Rik	ENSMUST00000030101	protein_coding	principal3	4	-1	73950846	958
ENSMUSG00000035704	protein_coding	Alg8	ENSMUST00000149031	retained_intron		7	1	97388042	1001
ENSMUSG00000020020	protein_coding	Usp44	ENSMUST00000095333	processed_transcript		10	1	93831555	2946
ENSMUSG00000026918	protein_coding	Brd3	ENSMUST00000126059	processed_transcript		2	-1	27475181	331
ENSMUSG00000028475	protein_coding	Spaar	ENSMUST00000131248	protein_coding	principal1	4	1	43730034	4086
ENSMUSG00000110108	processed_pseudogene	Gm3702	ENSMUST00000211754	processed_pseudogene		7	-1	9966233	346
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000077941	protein_coding		2	-1	91183818	5990
ENSMUSG00000035704	protein_coding	Alg8	ENSMUST00000137105	retained_intron		7	1	97390778	550
ENSMUSG00000031997	protein_coding	Trpc6	ENSMUST00000217462	protein_coding		9	1	8544196	3168
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000111381	protein_coding		2	-1	91183818	5873
ENSMUSG00000056458	protein_coding	Mok	ENSMUST00000021701	retained_intron		12	-1	110840939	2829
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000111372	protein_coding		2	-1	91183818	5813
ENSMUSG00000031148	protein_coding	Gpkow	ENSMUST00000049896	protein_coding	principal1	X	1	7697131	3579
ENSMUSG00000028475	protein_coding	Spaar	ENSMUST00000142309	processed_transcript		4	1	43732259	1199
ENSMUSG00000056458	protein_coding	Mok	ENSMUST00000177224	protein_coding		12	-1	110840927	551
ENSMUSG00000020020	protein_coding	Usp44	ENSMUST00000216224	protein_coding	principal1	10	1	93833818	2449
ENSMUSG00000028396	protein_coding	2310002L09Rik	ENSMUST00000095023	protein_coding	alternative2	4	-1	73950845	1929
ENSMUSG00000031997	protein_coding	Trpc6	ENSMUST00000214596	protein_coding		9	1	8544243	2913
ENSMUSG00000031148	protein_coding	Gpkow	ENSMUST00000154562	protein_coding		X	1	7703505	568
ENSMUSG00000057696	processed_pseudogene	Rpl30-ps1	ENSMUST00000119767	processed_pseudogene		6	1	38376807	348
ENSMUSG00000109607	lincRNA	Gm34533	ENSMUST00000209249	lincRNA		8	1	35222958	552
ENSMUSG00000083417	unprocessed_pseudogene	Olfr269-ps1	ENSMUST00000120783	unprocessed_pseudogene		4	-1	43767777	302
ENSMUSG00000111602	lincRNA	Gm32014	ENSMUST00000215328	lincRNA		9	-1	8740988	4168
ENSMUSG00000109688	lincRNA	Gm34597	ENSMUST00000211189	lincRNA		8	-1	35245479	633
ENSMUSG00000075595	protein_coding	Zfp652	ENSMUST00000107717	protein_coding	principal1	11	1	95712673	10433
ENSMUSG00000031148	protein_coding	Gpkow	ENSMUST00000129845	retained_intron		X	1	7705853	674
ENSMUSG00000111602	lincRNA	Gm32014	ENSMUST00000214779	lincRNA		9	-1	8740942	5145
ENSMUSG00000026918	protein_coding	Brd3	ENSMUST00000164296	protein_coding	principal3	2	-1	27464116	2791
ENSMUSG00000044801	protein_coding	Olfr159	ENSMUST00000053931	protein_coding	principal1	4	-1	43771009	960
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000172040	processed_transcript		12	1	105784711	726
ENSMUSG00000028965	protein_coding	Tnfrsf9	ENSMUST00000135169	protein_coding		4	1	150914562	715
ENSMUSG00000109698	bidirectional_promoter_lncRNA	Gm45469	ENSMUST00000210468	bidirectional_promoter_lncRNA		8	-1	35376392	854
ENSMUSG00000075595	protein_coding	Zfp652	ENSMUST00000133070	nonsense_mediated_decay		11	1	95713011	6568
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000163473	protein_coding	alternative2	12	1	105784716	2544
ENSMUSG00000075595	protein_coding	Zfp652	ENSMUST00000148945	nonsense_mediated_decay		11	1	95749000	3982
ENSMUSG00000111338	polymorphic_pseudogene	Olfr29-ps1	ENSMUST00000117959	polymorphic_pseudogene	principal1	4	-1	43782328	963
ENSMUSG00000026918	protein_coding	Brd3	ENSMUST00000113941	protein_coding	alternative2	2	-1	27475673	5289
ENSMUSG00000046794	protein_coding	Ppp1r3b	ENSMUST00000210337	protein_coding	principal1	8	1	35375739	4349
ENSMUSG00000081329	processed_pseudogene	Gm12492	ENSMUST00000117665	processed_pseudogene		4	-1	43800255	564
ENSMUSG00000075595	protein_coding	Zfp652	ENSMUST00000091565	protein_coding	principal1	11	1	95749067	2663
ENSMUSG00000026687	protein_coding	Aldh9a1	ENSMUST00000028004	protein_coding	principal1	1	1	167349991	2835
ENSMUSG00000082981	processed_pseudogene	Polr2k-ps	ENSMUST00000120170	processed_pseudogene		11	1	95761491	175
ENSMUSG00000046794	protein_coding	Ppp1r3b	ENSMUST00000070481	protein_coding	principal1	8	1	35375741	4221
ENSMUSG00000058833	protein_coding	Rex1bd	ENSMUST00000135773	retained_intron		8	-1	70506721	725
ENSMUSG00000046794	protein_coding	Ppp1r3b	ENSMUST00000211648	protein_coding	principal1	8	1	35375758	4386
ENSMUSG00000026687	protein_coding	Aldh9a1	ENSMUST00000194843	processed_transcript		1	1	167350236	511
ENSMUSG00000061469	protein_coding	Gm12569	ENSMUST00000126189	protein_coding	principal5	11	1	51220473	1462
ENSMUSG00000061469	protein_coding	Gm12569	ENSMUST00000074198	protein_coding	alternative2	11	1	51234125	489
ENSMUSG00000026687	protein_coding	Aldh9a1	ENSMUST00000193091	retained_intron		1	1	167350312	600
ENSMUSG00000050860	protein_coding	Phospho1	ENSMUST00000150134	protein_coding		11	1	95824499	590
ENSMUSG00000046794	protein_coding	Ppp1r3b	ENSMUST00000211472	processed_transcript		8	1	35376660	1764
ENSMUSG00000021055	protein_coding	Esr2	ENSMUST00000110421	protein_coding	alternative2	12	-1	76167715	3001
ENSMUSG00000026687	protein_coding	Aldh9a1	ENSMUST00000191715	retained_intron		1	1	167364166	840
ENSMUSG00000054976	protein_coding	Nyap2	ENSMUST00000137862	protein_coding		1	1	81076950	3393
ENSMUSG00000058833	protein_coding	Rex1bd	ENSMUST00000143598	retained_intron		8	-1	70506112	572
ENSMUSG00000116536	processed_pseudogene	Gm2805	ENSMUST00000232386	processed_pseudogene		16	1	90089983	514
ENSMUSG00000012443	protein_coding	Kif11	ENSMUST00000012587	protein_coding	principal1	19	1	37376403	4819
ENSMUSG00000058833	protein_coding	Rex1bd	ENSMUST00000133683	processed_transcript		8	-1	70506426	632
ENSMUSG00000042372	protein_coding	Dmrt3	ENSMUST00000237821	protein_coding		19	1	25610301	348
ENSMUSG00000050860	protein_coding	Phospho1	ENSMUST00000054173	protein_coding	principal1	11	1	95824500	1910
ENSMUSG00000012443	protein_coding	Kif11	ENSMUST00000236027	retained_intron		19	1	37402181	3127
ENSMUSG00000027810	protein_coding	Eif2a	ENSMUST00000029387	protein_coding	principal1	3	1	58525821	2299
ENSMUSG00000060257	protein_coding	Scrt2	ENSMUST00000064061	protein_coding	principal1	2	1	152081529	3395
ENSMUSG00000081107	processed_pseudogene	Gm12235	ENSMUST00000118596	processed_pseudogene		11	-1	55464009	170
ENSMUSG00000102353	TEC	Gm38345	ENSMUST00000192635	TEC		19	-1	37434656	1748
ENSMUSG00000024844	protein_coding	Banf1	ENSMUST00000025762	protein_coding	principal1	19	-1	5367168	1261
ENSMUSG00000042372	protein_coding	Dmrt3	ENSMUST00000048935	protein_coding	principal1	19	1	25610537	2391
ENSMUSG00000050860	protein_coding	Phospho1	ENSMUST00000176538	protein_coding		11	1	95830763	594
ENSMUSG00000054976	protein_coding	Nyap2	ENSMUST00000123720	protein_coding		1	1	81077204	3471
ENSMUSG00000021675	protein_coding	F2rl2	ENSMUST00000022182	protein_coding	principal1	13	1	95696853	2502
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000166498	retained_intron		12	1	105784733	2076
ENSMUSG00000024844	protein_coding	Banf1	ENSMUST00000237704	processed_transcript		19	-1	5366791	743
ENSMUSG00000118436	antisense	Gm32880	ENSMUST00000238548	antisense		13	1	95736583	969
ENSMUSG00000028965	protein_coding	Tnfrsf9	ENSMUST00000030808	protein_coding	principal3	4	1	150920190	2099
ENSMUSG00000024844	protein_coding	Banf1	ENSMUST00000170010	protein_coding	principal1	19	-1	5366363	758
ENSMUSG00000054976	protein_coding	Nyap2	ENSMUST00000068275	protein_coding		1	1	81077317	4919
ENSMUSG00000054976	protein_coding	Nyap2	ENSMUST00000113494	protein_coding		1	1	81077324	4540
ENSMUSG00000028965	protein_coding	Tnfrsf9	ENSMUST00000105671	protein_coding	principal3	4	1	150925306	1278
ENSMUSG00000054976	protein_coding	Nyap2	ENSMUST00000123285	protein_coding	principal1	1	1	81077583	7501
ENSMUSG00000090854	protein_coding	Gm4340	ENSMUST00000181615	protein_coding	principal5	10	1	104194042	1258
ENSMUSG00000024844	protein_coding	Banf1	ENSMUST00000237167	protein_coding	principal1	19	-1	5366606	732
ENSMUSG00000090854	protein_coding	Gm4340	ENSMUST00000181036	protein_coding	alternative2	10	1	104194457	1197
ENSMUSG00000090854	protein_coding	Gm4340	ENSMUST00000163113	protein_coding	alternative2	10	1	104195397	807
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000114122	processed_transcript		16	-1	89857817	4596
ENSMUSG00000028965	protein_coding	Tnfrsf9	ENSMUST00000139826	protein_coding		4	1	150927918	722
ENSMUSG00000093533	polymorphic_pseudogene	Vmn2r127	ENSMUST00000177481	polymorphic_pseudogene	principal1	17	1	19141468	2573
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000111371	protein_coding		2	-1	91183818	5816
ENSMUSG00000021055	protein_coding	Esr2	ENSMUST00000101291	protein_coding		12	-1	76177259	3362
ENSMUSG00000028965	protein_coding	Tnfrsf9	ENSMUST00000146133	processed_transcript		4	1	150927999	341
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000075269	protein_coding		2	-1	91183818	5756
ENSMUSG00000021055	protein_coding	Esr2	ENSMUST00000133564	nonsense_mediated_decay		12	-1	76177259	3169
ENSMUSG00000028965	protein_coding	Tnfrsf9	ENSMUST00000060901	protein_coding	alternative2	4	1	150929676	1003
ENSMUSG00000028965	protein_coding	Tnfrsf9	ENSMUST00000126707	protein_coding		4	1	150929797	722
ENSMUSG00000027810	protein_coding	Eif2a	ENSMUST00000137469	retained_intron		3	1	58526042	1035
ENSMUSG00000045942	protein_coding	BC049762	ENSMUST00000065950	protein_coding	principal2	11	-1	51262951	883
ENSMUSG00000028965	protein_coding	Tnfrsf9	ENSMUST00000105672	protein_coding	alternative2	4	1	150920155	1999
ENSMUSG00000019373	protein_coding	Cops3	ENSMUST00000019517	protein_coding	principal1	11	-1	59839838	1646
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000166329	nonsense_mediated_decay		12	1	105784738	2223
ENSMUSG00000028965	protein_coding	Tnfrsf9	ENSMUST00000116257	protein_coding	principal3	4	1	150927999	2115
ENSMUSG00000058833	protein_coding	Rex1bd	ENSMUST00000075175	protein_coding	principal2	8	-1	70506752	671
ENSMUSG00000021055	protein_coding	Esr2	ENSMUST00000218621	protein_coding		12	-1	76177259	3342
ENSMUSG00000018259	protein_coding	Prl8a2	ENSMUST00000018403	protein_coding	principal3	13	1	27345673	939
ENSMUSG00000045942	protein_coding	BC049762	ENSMUST00000054226	protein_coding	principal2	11	-1	51263046	760
ENSMUSG00000021055	protein_coding	Esr2	ENSMUST00000076634	protein_coding	principal2	12	-1	76177259	3288
ENSMUSG00000019373	protein_coding	Cops3	ENSMUST00000156837	protein_coding		11	-1	59836935	730
ENSMUSG00000045942	protein_coding	BC049762	ENSMUST00000231433	protein_coding	alternative2	11	-1	51256264	855
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000066824	protein_coding	principal4	4	1	102760135	4305
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000165584	processed_transcript		12	1	105784740	809
ENSMUSG00000001786	protein_coding	Fbxo7	ENSMUST00000130320	protein_coding	principal3	10	1	86021972	5388
ENSMUSG00000046580	processed_pseudogene	Gm7862	ENSMUST00000121461	processed_pseudogene		12	-1	76152627	292
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000137592	processed_transcript		4	1	102760328	466
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000133898	protein_coding		2	-1	121586433	3354
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000169938	nonsense_mediated_decay		12	1	105784743	4356
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000068156	protein_coding	principal1	19	-1	16780927	10838
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000072481	protein_coding	alternative1	4	1	102760345	3915
ENSMUSG00000058833	protein_coding	Rex1bd	ENSMUST00000136913	protein_coding	alternative2	8	-1	70506737	671
ENSMUSG00000027810	protein_coding	Eif2a	ENSMUST00000135876	nonsense_mediated_decay		3	1	58526043	1561
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000164326	nonsense_mediated_decay		12	1	105784745	529
ENSMUSG00000037966	protein_coding	Ninj1	ENSMUST00000049022	protein_coding	principal1	13	1	49187485	1187
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000156596	protein_coding		4	1	102760352	415
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000170540	protein_coding		12	1	105784746	741
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000136164	processed_transcript		4	1	102760355	658
ENSMUSG00000024841	protein_coding	Eif1ad	ENSMUST00000025759	protein_coding	principal1	19	1	5366741	2556
ENSMUSG00000058833	protein_coding	Rex1bd	ENSMUST00000138196	retained_intron		8	-1	70506108	542
ENSMUSG00000027810	protein_coding	Eif2a	ENSMUST00000154219	nonsense_mediated_decay		3	1	58526056	1945
ENSMUSG00000001786	protein_coding	Fbxo7	ENSMUST00000001837	nonsense_mediated_decay		10	1	86021987	1498
ENSMUSG00000058833	protein_coding	Rex1bd	ENSMUST00000132107	retained_intron		8	-1	70506699	837
ENSMUSG00000018259	protein_coding	Prl8a2	ENSMUST00000110363	protein_coding	alternative2	13	1	27345683	922
ENSMUSG00000027810	protein_coding	Eif2a	ENSMUST00000138848	protein_coding		3	1	58526303	913
ENSMUSG00000037966	protein_coding	Ninj1	ENSMUST00000120733	protein_coding		13	1	49187525	1321
ENSMUSG00000039715	protein_coding	Wdr34	ENSMUST00000113711	protein_coding	principal1	2	-1	30048881	1814
ENSMUSG00000058833	protein_coding	Rex1bd	ENSMUST00000128620	retained_intron		8	-1	70506713	781
ENSMUSG00000001786	protein_coding	Fbxo7	ENSMUST00000147168	nonsense_mediated_decay		10	1	86022019	385
ENSMUSG00000027810	protein_coding	Eif2a	ENSMUST00000138827	retained_intron		3	1	58543280	2258
ENSMUSG00000024841	protein_coding	Eif1ad	ENSMUST00000235664	processed_transcript		19	1	5366945	444
ENSMUSG00000027810	protein_coding	Eif2a	ENSMUST00000148251	retained_intron		3	1	58544233	3432
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000166735	protein_coding		12	1	105784757	1033
ENSMUSG00000018259	protein_coding	Prl8a2	ENSMUST00000223918	protein_coding		13	1	27350143	452
ENSMUSG00000039715	protein_coding	Wdr34	ENSMUST00000139145	retained_intron		2	-1	30032505	494
ENSMUSG00000106553	TEC	6720482G16Rik	ENSMUST00000199552	TEC		3	1	58526930	1192
ENSMUSG00000024841	protein_coding	Eif1ad	ENSMUST00000236059	retained_intron		19	1	5367022	862
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000170002	protein_coding	alternative2	12	1	105784872	2605
ENSMUSG00000039715	protein_coding	Wdr34	ENSMUST00000143892	retained_intron		2	-1	30035046	454
ENSMUSG00000037966	protein_coding	Ninj1	ENSMUST00000131280	nonsense_mediated_decay		13	1	49187536	706
ENSMUSG00000001786	protein_coding	Fbxo7	ENSMUST00000120344	protein_coding	alternative2	10	1	86022189	1655
ENSMUSG00000041417	protein_coding	Pik3r1	ENSMUST00000055518	protein_coding	principal1	13	-1	101768217	7113
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000163805	retained_intron		12	1	105799685	1170
ENSMUSG00000039715	protein_coding	Wdr34	ENSMUST00000146275	processed_transcript		2	-1	30048861	366
ENSMUSG00000020646	protein_coding	Mboat2	ENSMUST00000221952	protein_coding	alternative2	12	1	24831609	6792
ENSMUSG00000001786	protein_coding	Fbxo7	ENSMUST00000117597	protein_coding	alternative2	10	1	86022197	1799
ENSMUSG00000037966	protein_coding	Ninj1	ENSMUST00000150555	processed_transcript		13	1	49187767	350
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000169524	nonsense_mediated_decay		12	1	105808614	701
ENSMUSG00000110970	protein_coding	Olfr156	ENSMUST00000215406	protein_coding	principal1	4	-1	43823866	1850
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000153414	nonsense_mediated_decay		11	1	51261730	649
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000170831	retained_intron		12	1	105809324	295
ENSMUSG00000037966	protein_coding	Ninj1	ENSMUST00000153819	processed_transcript		13	1	49190296	1098
ENSMUSG00000041538	protein_coding	H2-Ob	ENSMUST00000095342	protein_coding	principal1	17	1	34238903	2670
ENSMUSG00000110970	protein_coding	Olfr156	ENSMUST00000079234	protein_coding	principal1	4	-1	43823866	1740
ENSMUSG00000001786	protein_coding	Fbxo7	ENSMUST00000134490	processed_transcript		10	1	86032971	4728
ENSMUSG00000020646	protein_coding	Mboat2	ENSMUST00000220497	retained_intron		12	1	24831615	2827
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000166471	protein_coding		12	1	105812300	1508
ENSMUSG00000110970	protein_coding	Olfr156	ENSMUST00000214843	protein_coding	principal1	4	-1	43823895	1559
ENSMUSG00000041417	protein_coding	Pik3r1	ENSMUST00000035532	protein_coding		13	-1	101692630	2923
ENSMUSG00000001786	protein_coding	Fbxo7	ENSMUST00000130383	retained_intron		10	1	86042452	780
ENSMUSG00000020646	protein_coding	Mboat2	ENSMUST00000078902	protein_coding	alternative2	12	1	24831618	2467
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000029316	protein_coding	principal1	3	-1	54735393	1300
ENSMUSG00000097692	antisense	A230060F14Rik	ENSMUST00000190739	antisense		10	-1	86022329	1889
ENSMUSG00000110970	protein_coding	Olfr156	ENSMUST00000079465	protein_coding	principal1	4	-1	43821433	1099
ENSMUSG00000041538	protein_coding	H2-Ob	ENSMUST00000173681	retained_intron		17	1	34238905	655
ENSMUSG00000097692	antisense	A230060F14Rik	ENSMUST00000181665	antisense		10	-1	86022325	546
ENSMUSG00000087342	sense_intronic	Gm12238	ENSMUST00000127764	sense_intronic		11	1	55482706	124
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000164798	protein_coding		12	1	105812351	966
ENSMUSG00000041417	protein_coding	Pik3r1	ENSMUST00000187009	protein_coding		13	-1	101692576	701
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000080728	protein_coding		4	1	102760363	3712
ENSMUSG00000019795	protein_coding	Pcmt1	ENSMUST00000162606	protein_coding	alternative2	10	-1	7663608	2757
ENSMUSG00000008398	protein_coding	Elk3	ENSMUST00000008542	protein_coding	principal1	10	-1	93311135	4212
ENSMUSG00000020646	protein_coding	Mboat2	ENSMUST00000110942	protein_coding	principal3	12	1	24831623	2351
ENSMUSG00000117596	antisense	Gm50013	ENSMUST00000234156	antisense		17	-1	26274744	456
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000224149	nonsense_mediated_decay		19	-1	16780822	10037
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000125632	retained_intron		3	-1	54729458	478
ENSMUSG00000041417	protein_coding	Pik3r1	ENSMUST00000185795	protein_coding		13	-1	101694600	547
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000170189	retained_intron		12	1	105817880	581
ENSMUSG00000041538	protein_coding	H2-Ob	ENSMUST00000167280	protein_coding		17	1	34238931	1878
ENSMUSG00000019373	protein_coding	Cops3	ENSMUST00000124101	processed_transcript		11	-1	59839838	2039
ENSMUSG00000041417	protein_coding	Pik3r1	ENSMUST00000190171	retained_intron		13	-1	101692343	610
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000140289	processed_transcript		4	1	102760375	713
ENSMUSG00000008398	protein_coding	Elk3	ENSMUST00000129827	nonsense_mediated_decay		10	-1	93310811	1653
ENSMUSG00000041538	protein_coding	H2-Ob	ENSMUST00000236838	protein_coding		17	1	34238946	1651
ENSMUSG00000096180	protein_coding	Vmn2r49	ENSMUST00000108550	protein_coding	principal1	7	-1	9992257	2677
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000225899	protein_coding		19	-1	16640618	971
ENSMUSG00000041417	protein_coding	Pik3r1	ENSMUST00000185701	retained_intron		13	-1	101702104	472
ENSMUSG00000021111	protein_coding	Papola	ENSMUST00000172089	protein_coding		12	1	105829067	686
ENSMUSG00000008398	protein_coding	Elk3	ENSMUST00000151153	protein_coding		10	-1	93310969	1336
ENSMUSG00000041417	protein_coding	Pik3r1	ENSMUST00000189426	retained_intron		13	-1	101768213	2706
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000225233	protein_coding		19	-1	16664648	2939
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000183855	nonsense_mediated_decay		4	1	102760465	1121
ENSMUSG00000027209	protein_coding	Fam227b	ENSMUST00000110446	protein_coding	principal2	2	-1	126152004	1858
ENSMUSG00000100520	unprocessed_pseudogene	Gm20885	ENSMUST00000190192	unprocessed_pseudogene		Y	1	63747931	654
ENSMUSG00000020646	protein_coding	Mboat2	ENSMUST00000222994	nonsense_mediated_decay		12	1	24831631	2475
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000106882	protein_coding		4	1	102760525	6061
ENSMUSG00000008398	protein_coding	Elk3	ENSMUST00000133365	retained_intron		10	-1	93311135	931
ENSMUSG00000019373	protein_coding	Cops3	ENSMUST00000136901	processed_transcript		11	-1	59833293	929
ENSMUSG00000019373	protein_coding	Cops3	ENSMUST00000130027	processed_transcript		11	-1	59839838	1024
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000149547	protein_coding		4	1	102870564	2251
ENSMUSG00000113621	bidirectional_promoter_lncRNA	2900060N12Rik	ENSMUST00000223485	bidirectional_promoter_lncRNA		12	-1	24831202	667
ENSMUSG00000102107	unprocessed_pseudogene	Gm29062	ENSMUST00000186032	unprocessed_pseudogene		Y	-1	63834597	694
ENSMUSG00000113621	bidirectional_promoter_lncRNA	2900060N12Rik	ENSMUST00000221412	bidirectional_promoter_lncRNA		12	-1	24831126	3721
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000223897	retained_intron		19	-1	16677979	3035
ENSMUSG00000101057	unprocessed_pseudogene	Gm29057	ENSMUST00000186468	unprocessed_pseudogene		Y	-1	63871150	315
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000176080	retained_intron		19	-1	8776962	2476
ENSMUSG00000041538	protein_coding	H2-Ob	ENSMUST00000173764	processed_transcript		17	1	34240036	1319
ENSMUSG00000019373	protein_coding	Cops3	ENSMUST00000141415	protein_coding		11	-1	59839752	348
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000224725	retained_intron		19	-1	16666284	537
ENSMUSG00000041538	protein_coding	H2-Ob	ENSMUST00000237064	retained_intron		17	1	34242081	1141
ENSMUSG00000021624	protein_coding	Cd180	ENSMUST00000022124	protein_coding	principal1	13	1	102693558	2650
ENSMUSG00000062152	processed_pseudogene	Rpl21-ps14	ENSMUST00000080279	processed_pseudogene		8	1	4861169	483
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000131431	processed_transcript		4	1	102921295	549
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000225349	retained_intron		19	-1	16686573	488
ENSMUSG00000019373	protein_coding	Cops3	ENSMUST00000133652	processed_transcript		11	-1	59839812	526
ENSMUSG00000041538	protein_coding	H2-Ob	ENSMUST00000172952	processed_transcript		17	1	34248464	1872
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000129143	protein_coding		2	1	131491496	768
ENSMUSG00000084413	processed_pseudogene	Gm12017	ENSMUST00000122453	processed_pseudogene		11	-1	17974790	1003
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000141624	processed_transcript		4	1	102927190	523
ENSMUSG00000020015	protein_coding	Cdk17	ENSMUST00000215495	retained_intron		10	1	93160875	1388
ENSMUSG00000114180	TEC	Gm47989	ENSMUST00000221928	TEC		12	1	66942411	111
ENSMUSG00000109295	processed_pseudogene	Gm5739	ENSMUST00000208601	processed_pseudogene		8	1	5079294	1703
ENSMUSG00000019795	protein_coding	Pcmt1	ENSMUST00000159917	protein_coding	principal3	10	-1	7663303	2491
ENSMUSG00000113501	processed_pseudogene	Gm18940	ENSMUST00000222518	processed_pseudogene		12	1	66845590	871
ENSMUSG00000114827	processed_pseudogene	Gm46432	ENSMUST00000225916	processed_pseudogene		13	-1	84281816	638
ENSMUSG00000021624	protein_coding	Cd180	ENSMUST00000171267	protein_coding		13	1	102693565	1787
ENSMUSG00000028524	protein_coding	Sgip1	ENSMUST00000140676	processed_transcript		4	1	102962356	815
ENSMUSG00000027209	protein_coding	Fam227b	ENSMUST00000156413	retained_intron		2	-1	126152004	2031
ENSMUSG00000087249	antisense	Gm16062	ENSMUST00000151825	antisense		11	1	59810080	771
ENSMUSG00000085453	lincRNA	Gm12018	ENSMUST00000150694	lincRNA		11	1	18095986	3375
ENSMUSG00000113808	TEC	Gm47988	ENSMUST00000221809	TEC		12	-1	66502546	785
ENSMUSG00000021624	protein_coding	Cd180	ENSMUST00000167144	protein_coding		13	1	102693573	430
ENSMUSG00000094079	processed_pseudogene	Rpl23a-ps12	ENSMUST00000179178	processed_pseudogene		7	1	33697270	468
ENSMUSG00000019795	protein_coding	Pcmt1	ENSMUST00000161428	protein_coding		10	-1	7649155	1073
ENSMUSG00000027209	protein_coding	Fam227b	ENSMUST00000178118	protein_coding	principal2	2	-1	126146251	1599
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000130641	protein_coding		11	1	51261730	673
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000110593	protein_coding		2	-1	121765108	3950
ENSMUSG00000021624	protein_coding	Cd180	ENSMUST00000170878	protein_coding		13	1	102693579	842
ENSMUSG00000028523	protein_coding	Tctex1d1	ENSMUST00000220547	nonsense_mediated_decay		4	1	102978606	540
ENSMUSG00000103232	TEC	Gm37160	ENSMUST00000193081	TEC		2	-1	13240627	1689
ENSMUSG00000021624	protein_coding	Cd180	ENSMUST00000172138	protein_coding		13	1	102693611	518
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000138157	protein_coding	principal2	2	-1	121807087	4230
ENSMUSG00000019795	protein_coding	Pcmt1	ENSMUST00000163085	protein_coding		10	-1	7663261	1132
ENSMUSG00000078657	protein_coding	Crnn	ENSMUST00000195515	protein_coding	principal1	3	1	93144789	1863
ENSMUSG00000061376	protein_coding	Vmn1r219	ENSMUST00000226845	protein_coding	principal1	13	1	23159312	5979
ENSMUSG00000027209	protein_coding	Fam227b	ENSMUST00000110448	protein_coding	alternative2	2	-1	126151984	1693
ENSMUSG00000103360	TEC	Gm38156	ENSMUST00000194601	TEC		2	-1	13118435	2260
ENSMUSG00000024855	protein_coding	Pacs1	ENSMUST00000025786	protein_coding	principal1	19	-1	5273119	4869
ENSMUSG00000091577	transcribed_processed_pseudogene	Gm6211	ENSMUST00000147973	processed_transcript		13	-1	103164069	4275
ENSMUSG00000061376	protein_coding	Vmn1r219	ENSMUST00000228666	protein_coding	principal1	13	1	23159312	5993
ENSMUSG00000078657	protein_coding	Crnn	ENSMUST00000192372	protein_coding		3	1	93148210	597
ENSMUSG00000061376	protein_coding	Vmn1r219	ENSMUST00000227388	protein_coding	principal1	13	1	23159312	7948
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000131092	protein_coding		2	-1	121555599	755
ENSMUSG00000019795	protein_coding	Pcmt1	ENSMUST00000160250	retained_intron		10	-1	7663608	1369
ENSMUSG00000061376	protein_coding	Vmn1r219	ENSMUST00000228113	protein_coding	principal1	13	1	23160606	5639
ENSMUSG00000091577	transcribed_processed_pseudogene	Gm6211	ENSMUST00000167849	transcribed_processed_pseudogene		13	-1	103160838	925
ENSMUSG00000061376	protein_coding	Vmn1r219	ENSMUST00000076180	protein_coding	principal1	13	1	23162643	939
ENSMUSG00000078657	protein_coding	Crnn	ENSMUST00000107300	protein_coding	principal1	3	1	93144787	1628
ENSMUSG00000019795	protein_coding	Pcmt1	ENSMUST00000162682	protein_coding		10	-1	7681136	465
ENSMUSG00000091906	antisense	1700099I09Rik	ENSMUST00000171722	antisense		13	1	102760255	677
ENSMUSG00000035762	protein_coding	Tmem161b	ENSMUST00000224501	processed_transcript		13	1	84222296	462
ENSMUSG00000094446	processed_pseudogene	Gm6344	ENSMUST00000075962	processed_pseudogene		13	1	55085777	483
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000223846	retained_intron		19	-1	16750938	2563
ENSMUSG00000080826	processed_pseudogene	Gm12019	ENSMUST00000121258	processed_pseudogene		11	-1	18206944	532
ENSMUSG00000019795	protein_coding	Pcmt1	ENSMUST00000159835	processed_transcript		10	-1	7651536	514
ENSMUSG00000115041	TEC	Gm48939	ENSMUST00000228616	TEC		14	-1	46806151	2017
ENSMUSG00000059182	protein_coding	Skap2	ENSMUST00000204778	protein_coding	principal1	6	-1	52012549	3382
ENSMUSG00000019795	protein_coding	Pcmt1	ENSMUST00000159977	protein_coding		10	-1	7681130	756
ENSMUSG00000091906	antisense	1700099I09Rik	ENSMUST00000167834	antisense		13	1	102760270	769
ENSMUSG00000103902	processed_pseudogene	Gm37501	ENSMUST00000192830	processed_pseudogene		3	1	93152178	691
ENSMUSG00000019795	protein_coding	Pcmt1	ENSMUST00000160517	retained_intron		10	-1	7663264	381
ENSMUSG00000059182	protein_coding	Skap2	ENSMUST00000205174	processed_transcript		6	-1	51871929	661
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000121219	protein_coding		2	-1	121787344	2262
ENSMUSG00000070330	protein_coding	Tmem235	ENSMUST00000093905	protein_coding	principal1	11	1	117860752	1820
ENSMUSG00000059182	protein_coding	Skap2	ENSMUST00000078214	protein_coding		6	-1	52012515	1583
ENSMUSG00000059182	protein_coding	Skap2	ENSMUST00000203948	protein_coding		6	-1	51909380	380
ENSMUSG00000028523	protein_coding	Tctex1d1	ENSMUST00000223169	protein_coding	alternative2	4	1	102978691	683
ENSMUSG00000059182	protein_coding	Skap2	ENSMUST00000205112	retained_intron		6	-1	51872670	2443
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000155570	protein_coding		2	-1	121765108	1861
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000224428	retained_intron		19	-1	16780912	2689
ENSMUSG00000028523	protein_coding	Tctex1d1	ENSMUST00000030248	protein_coding	principal3	4	1	102986379	977
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000225079	retained_intron		19	-1	16743038	465
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000150923	retained_intron		3	-1	54735037	2316
ENSMUSG00000099711	protein_coding	Btbd35f21	ENSMUST00000105017	protein_coding	principal1	X	1	32726109	1943
ENSMUSG00000059182	protein_coding	Skap2	ENSMUST00000204178	processed_transcript		6	-1	51933440	751
ENSMUSG00000046230	protein_coding	Vps13a	ENSMUST00000225764	retained_intron		19	-1	16780933	2591
ENSMUSG00000114931	processed_pseudogene	Gm32256	ENSMUST00000223692	processed_pseudogene		19	1	16715799	463
ENSMUSG00000059182	protein_coding	Skap2	ENSMUST00000203313	retained_intron		6	-1	52012532	5896
ENSMUSG00000111585	processed_pseudogene	Gm47355	ENSMUST00000213397	processed_pseudogene		10	1	48566168	3832
ENSMUSG00000027208	protein_coding	Fgf7	ENSMUST00000064794	protein_coding	principal1	2	1	126034658	2672
ENSMUSG00000118405	protein_coding	Btbd35f30	ENSMUST00000238726	protein_coding	principal1	X	1	32894581	1908
ENSMUSG00000111436	processed_pseudogene	Gm47356	ENSMUST00000214349	processed_pseudogene		10	-1	48681857	3847
ENSMUSG00000028523	protein_coding	Tctex1d1	ENSMUST00000125417	protein_coding	alternative2	4	1	102986379	859
ENSMUSG00000111581	processed_pseudogene	Gm47364	ENSMUST00000214448	processed_pseudogene		10	1	48682690	284
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000134892	retained_intron		3	-1	54734802	985
ENSMUSG00000043635	protein_coding	Adamts3	ENSMUST00000061427	protein_coding	principal3	5	-1	89882935	3934
ENSMUSG00000118481	processed_pseudogene	Gm21789	ENSMUST00000238674	processed_pseudogene		X	1	32942595	333
ENSMUSG00000111900	processed_pseudogene	Gm47377	ENSMUST00000218494	processed_pseudogene		10	1	48692852	1561
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000128428	nonsense_mediated_decay		2	-1	121807023	1987
ENSMUSG00000028523	protein_coding	Tctex1d1	ENSMUST00000169211	protein_coding	principal3	4	1	102986382	1000
ENSMUSG00000027208	protein_coding	Fgf7	ENSMUST00000110442	protein_coding	principal1	2	1	126034973	2287
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000154787	nonsense_mediated_decay		3	-1	54734313	438
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000110592	protein_coding	alternative1	2	-1	121806992	2222
ENSMUSG00000114270	lincRNA	Gm48746	ENSMUST00000225277	lincRNA		13	1	35905457	1036
ENSMUSG00000092253	unprocessed_pseudogene	H2-Q3	ENSMUST00000172583	unprocessed_pseudogene		17	1	35358989	608
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000212518	protein_coding		2	-1	121551351	922
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000127112	retained_intron		3	-1	54735367	1983
ENSMUSG00000043635	protein_coding	Adamts3	ENSMUST00000163159	protein_coding	alternative2	5	-1	89882935	3937
ENSMUSG00000027208	protein_coding	Fgf7	ENSMUST00000138576	processed_transcript		2	1	126034658	853
ENSMUSG00000028523	protein_coding	Tctex1d1	ENSMUST00000140654	protein_coding	alternative2	4	1	102991784	891
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000153932	processed_transcript		2	-1	121558557	673
ENSMUSG00000024855	protein_coding	Pacs1	ENSMUST00000236775	nonsense_mediated_decay		19	-1	5273028	2847
ENSMUSG00000028523	protein_coding	Tctex1d1	ENSMUST00000139883	retained_intron		4	1	102991822	599
ENSMUSG00000043635	protein_coding	Adamts3	ENSMUST00000198151	protein_coding		5	-1	89883334	1833
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000153224	protein_coding		3	-1	54735046	412
ENSMUSG00000028523	protein_coding	Tctex1d1	ENSMUST00000116317	protein_coding	principal3	4	1	102988573	1772
ENSMUSG00000023073	protein_coding	Slc10a2	ENSMUST00000023835	protein_coding	principal1	8	-1	5105351	4152
ENSMUSG00000024855	protein_coding	Pacs1	ENSMUST00000235130	retained_intron		19	-1	5273102	3089
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000140935	retained_intron		3	-1	54734337	913
ENSMUSG00000043635	protein_coding	Adamts3	ENSMUST00000196507	processed_transcript		5	-1	89882147	563
ENSMUSG00000018583	protein_coding	G3bp1	ENSMUST00000018727	protein_coding	principal1	11	1	55469685	6703
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000142377	retained_intron		3	-1	54733223	590
ENSMUSG00000081302	processed_pseudogene	Gm12020	ENSMUST00000119030	processed_pseudogene		11	-1	18327671	2042
ENSMUSG00000024855	protein_coding	Pacs1	ENSMUST00000236624	retained_intron		19	-1	5143430	719
ENSMUSG00000102504	TEC	Gm21955	ENSMUST00000194137	TEC		4	1	42714926	4968
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000135935	retained_intron		3	-1	54735035	389
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000142016	retained_intron		2	-1	121807057	2454
ENSMUSG00000024855	protein_coding	Pacs1	ENSMUST00000237967	retained_intron		19	-1	5143499	576
ENSMUSG00000018583	protein_coding	G3bp1	ENSMUST00000151790	processed_transcript		11	1	55469718	592
ENSMUSG00000102178	TEC	Gm37869	ENSMUST00000193385	TEC		11	1	18436242	595
ENSMUSG00000027752	protein_coding	Exosc8	ENSMUST00000198780	retained_intron		3	-1	54735035	1093
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000145075	nonsense_mediated_decay		2	-1	121806872	890
ENSMUSG00000085041	antisense	BB031773	ENSMUST00000148892	antisense		4	-1	103011965	3655
ENSMUSG00000024855	protein_coding	Pacs1	ENSMUST00000237463	protein_coding		19	-1	5273107	681
ENSMUSG00000096566	protein_coding	Olfr1306	ENSMUST00000214844	protein_coding	principal1	2	-1	111916271	1893
ENSMUSG00000027238	protein_coding	Frmd5	ENSMUST00000153704	processed_transcript		2	-1	121584012	504
ENSMUSG00000024855	protein_coding	Pacs1	ENSMUST00000236470	retained_intron		19	-1	5272707	665
ENSMUSG00000096099	protein_coding	Vmn1r220	ENSMUST00000228239	protein_coding	principal1	13	-1	23187975	7849
ENSMUSG00000024986	protein_coding	Hhex	ENSMUST00000237452	retained_intron		19	1	37434810	3908
ENSMUSG00000096566	protein_coding	Olfr1306	ENSMUST00000099607	protein_coding	principal1	2	-1	111912928	939
ENSMUSG00000118104	processed_pseudogene	Gm50189	ENSMUST00000235422	processed_pseudogene		19	1	5258750	213
ENSMUSG00000030598	protein_coding	Fbxo17	ENSMUST00000032818	protein_coding	principal1	7	1	28716804	1958
ENSMUSG00000096099	protein_coding	Vmn1r220	ENSMUST00000227950	protein_coding	principal1	13	-1	23187975	6238
ENSMUSG00000105930	processed_pseudogene	Gm17889	ENSMUST00000198410	processed_pseudogene		5	1	18814204	598
ENSMUSG00000096099	protein_coding	Vmn1r220	ENSMUST00000226651	protein_coding	principal1	13	-1	23187975	6252
ENSMUSG00000030598	protein_coding	Fbxo17	ENSMUST00000108278	nonsense_mediated_decay		7	1	28716832	1806
ENSMUSG00000106498	TEC	Gm43032	ENSMUST00000197967	TEC		5	-1	19201605	3123
ENSMUSG00000081069	processed_pseudogene	Gm13928	ENSMUST00000120326	processed_pseudogene		2	1	111926259	1732
ENSMUSG00000096099	protein_coding	Vmn1r220	ENSMUST00000227679	protein_coding	principal1	13	-1	23187975	7868
ENSMUSG00000058246	protein_coding	Gm10037	ENSMUST00000221266	protein_coding	principal5	13	1	67831106	549
ENSMUSG00000030598	protein_coding	Fbxo17	ENSMUST00000139172	retained_intron		7	1	28716856	835
ENSMUSG00000017713	protein_coding	Tha1	ENSMUST00000033230	protein_coding	principal1	11	-1	117873459	1770
ENSMUSG00000096099	protein_coding	Vmn1r220	ENSMUST00000228854	protein_coding	principal1	13	-1	23187975	7854
ENSMUSG00000030598	protein_coding	Fbxo17	ENSMUST00000108279	protein_coding		7	1	28716873	1563
ENSMUSG00000092611	unprocessed_pseudogene	Vmn2r-ps42	ENSMUST00000174123	unprocessed_pseudogene		7	-1	8969976	3463
ENSMUSG00000085181	antisense	Gm12709	ENSMUST00000149348	antisense		4	-1	102989755	1912
ENSMUSG00000096099	protein_coding	Vmn1r220	ENSMUST00000072385	protein_coding	principal1	13	-1	23184524	897
ENSMUSG00000030598	protein_coding	Fbxo17	ENSMUST00000167118	protein_coding	principal1	7	1	28732500	861
ENSMUSG00000058246	protein_coding	Gm10037	ENSMUST00000221620	protein_coding	principal5	13	1	67832730	636
ENSMUSG00000026727	protein_coding	Rsu1	ENSMUST00000114791	protein_coding		2	-1	13271333	1604
ENSMUSG00000058246	protein_coding	Gm10037	ENSMUST00000222626	protein_coding	alternative2	13	1	67833230	692
ENSMUSG00000058246	protein_coding	Gm10037	ENSMUST00000231606	protein_coding		13	1	67833854	523
ENSMUSG00000017713	protein_coding	Tha1	ENSMUST00000153989	processed_transcript		11	-1	117873481	2686
ENSMUSG00000097626	antisense	4921504A21Rik	ENSMUST00000180594	antisense		5	-1	19226555	2156
ENSMUSG00000085675	lincRNA	Gm12022	ENSMUST00000143311	lincRNA		11	-1	18493255	1340
ENSMUSG00000058246	protein_coding	Gm10037	ENSMUST00000060609	protein_coding	alternative2	13	1	67833235	315
ENSMUSG00000097626	antisense	4921504A21Rik	ENSMUST00000197496	antisense		5	-1	19226168	756
ENSMUSG00000109181	processed_pseudogene	Gm5605	ENSMUST00000208940	processed_pseudogene		8	1	5117361	1305
ENSMUSG00000017713	protein_coding	Tha1	ENSMUST00000138354	processed_transcript		11	-1	117871911	579
ENSMUSG00000106433	processed_pseudogene	Gm32102	ENSMUST00000196885	processed_pseudogene		5	1	19203672	241
ENSMUSG00000083979	processed_pseudogene	Gm12527	ENSMUST00000117967	processed_pseudogene		4	-1	59368866	564
ENSMUSG00000040034	protein_coding	Nup43	ENSMUST00000040135	protein_coding	principal1	10	1	7667503	1286
ENSMUSG00000085434	antisense	Gm11725	ENSMUST00000125607	antisense		11	1	117871250	1850
ENSMUSG00000064063	protein_coding	BC048507	ENSMUST00000078471	protein_coding	principal1	13	1	67863326	600
ENSMUSG00000040034	protein_coding	Nup43	ENSMUST00000162346	retained_intron		10	1	7667514	458
ENSMUSG00000113095	lincRNA	Gm7969	ENSMUST00000221347	lincRNA		13	1	67949751	2884
ENSMUSG00000118409	protein_coding	Btbd35f5	ENSMUST00000178747	protein_coding	principal1	X	1	32973938	1908
ENSMUSG00000024986	protein_coding	Hhex	ENSMUST00000025944	protein_coding	principal1	19	1	37434810	1802
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000177216	protein_coding	principal2	19	-1	8786257	2167
ENSMUSG00000039356	protein_coding	Exosc2	ENSMUST00000038474	protein_coding	principal1	2	1	31670715	1686
ENSMUSG00000040034	protein_coding	Nup43	ENSMUST00000162527	retained_intron		10	1	7667540	1735
ENSMUSG00000021418	protein_coding	Rpp40	ENSMUST00000171686	protein_coding	principal1	13	-1	35906359	4380
ENSMUSG00000026727	protein_coding	Rsu1	ENSMUST00000028059	protein_coding	principal1	2	-1	13271415	1546
ENSMUSG00000112984	lincRNA	Gm48419	ENSMUST00000220881	lincRNA		13	1	67965483	2884
ENSMUSG00000040034	protein_coding	Nup43	ENSMUST00000161060	retained_intron		10	1	7670755	750
ENSMUSG00000100667	protein_coding	1700040F15Rik	ENSMUST00000188244	protein_coding	principal1	Y	1	61102247	931
ENSMUSG00000081202	processed_pseudogene	Gm13220	ENSMUST00000121535	processed_pseudogene		2	1	9575836	508
ENSMUSG00000094115	unprocessed_pseudogene	Spin2-ps6	ENSMUST00000238661	unprocessed_pseudogene		X	1	33234626	818
ENSMUSG00000026727	protein_coding	Rsu1	ENSMUST00000191959	protein_coding		2	-1	13271394	720
ENSMUSG00000021418	protein_coding	Rpp40	ENSMUST00000174231	protein_coding		13	-1	35898868	276
ENSMUSG00000078721	protein_coding	Fam205a1	ENSMUST00000107979	protein_coding	principal1	4	-1	42853888	4146
ENSMUSG00000024986	protein_coding	Hhex	ENSMUST00000128184	protein_coding		19	1	37436739	1435
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000037181	protein_coding	principal1	12	-1	67222549	9833
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000222987	protein_coding		12	-1	66560975	1388
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000222623	protein_coding		12	-1	66560983	1449
ENSMUSG00000082364	processed_pseudogene	Gm11955	ENSMUST00000119801	processed_pseudogene		11	1	4107755	470
ENSMUSG00000085910	antisense	Gm12395	ENSMUST00000144765	antisense		4	1	42736593	536
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000176610	protein_coding	principal2	19	-1	8786316	2065
ENSMUSG00000021418	protein_coding	Rpp40	ENSMUST00000174852	retained_intron		13	-1	35906328	3269
ENSMUSG00000004508	protein_coding	Gab2	ENSMUST00000004622	protein_coding	principal3	7	1	97081586	6168
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000125755	processed_transcript		8	1	70172356	371
ENSMUSG00000021418	protein_coding	Rpp40	ENSMUST00000174230	protein_coding		13	-1	35906344	1053
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000178814	protein_coding		12	-1	67221221	3362
ENSMUSG00000039356	protein_coding	Exosc2	ENSMUST00000149094	retained_intron		2	1	31670719	2076
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000177056	protein_coding	alternative2	19	-1	8786316	2006
ENSMUSG00000039356	protein_coding	Exosc2	ENSMUST00000137156	protein_coding		2	1	31670734	747
ENSMUSG00000020015	protein_coding	Cdk17	ENSMUST00000069965	protein_coding	principal1	10	1	93160890	3615
ENSMUSG00000004508	protein_coding	Gab2	ENSMUST00000206791	protein_coding	alternative2	7	1	97081776	2065
ENSMUSG00000032020	protein_coding	Ubash3b	ENSMUST00000044155	protein_coding	principal1	9	-1	41158062	6354
ENSMUSG00000020015	protein_coding	Cdk17	ENSMUST00000213378	protein_coding		10	1	93181610	307
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000176496	protein_coding		19	-1	8786417	2224
ENSMUSG00000020015	protein_coding	Cdk17	ENSMUST00000214445	protein_coding		10	1	93206987	232
ENSMUSG00000039356	protein_coding	Exosc2	ENSMUST00000125883	nonsense_mediated_decay		2	1	31670743	518
ENSMUSG00000094951	IG_V_gene	Ighv5-6	ENSMUST00000103446	IG_V_gene	principal1	12	-1	113625956	353
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000101379	nonsense_mediated_decay		12	-1	67221202	3072
ENSMUSG00000104103	processed_pseudogene	Gm9517	ENSMUST00000195021	processed_pseudogene		12	-1	113630867	874
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000176747	retained_intron		19	-1	8779050	636
ENSMUSG00000039356	protein_coding	Exosc2	ENSMUST00000146135	processed_transcript		2	1	31673256	566
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000178724	retained_intron		12	-1	66486838	5217
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000223289	retained_intron		12	-1	66655343	1428
ENSMUSG00000039356	protein_coding	Exosc2	ENSMUST00000192043	retained_intron		2	1	31678284	496
ENSMUSG00000020015	protein_coding	Cdk17	ENSMUST00000215286	nonsense_mediated_decay		10	1	93208300	3242
ENSMUSG00000020015	protein_coding	Cdk17	ENSMUST00000216729	nonsense_mediated_decay		10	1	93239023	698
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000179729	processed_transcript		12	-1	66630113	594
ENSMUSG00000032020	protein_coding	Ubash3b	ENSMUST00000151485	protein_coding		9	-1	41079506	2231
ENSMUSG00000035762	protein_coding	Tmem161b	ENSMUST00000057495	protein_coding	principal1	13	1	84222300	2857
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000177690	processed_transcript		12	-1	66825729	631
ENSMUSG00000104029	TEC	Gm37210	ENSMUST00000192484	TEC		1	-1	81522341	2004
ENSMUSG00000026842	protein_coding	Abl1	ENSMUST00000146537	retained_intron		2	1	31688376	4155
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000093132	protein_coding	principal1	11	1	51263114	1949
ENSMUSG00000032020	protein_coding	Ubash3b	ENSMUST00000124819	processed_transcript		9	-1	41161520	369
ENSMUSG00000038578	protein_coding	Susd1	ENSMUST00000107544	protein_coding		4	-1	59438633	3220
ENSMUSG00000026842	protein_coding	Abl1	ENSMUST00000156736	processed_transcript		2	1	31688537	2017
ENSMUSG00000102987	lincRNA	Gm38324	ENSMUST00000194390	lincRNA		3	-1	22297830	411
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000179577	processed_transcript		12	-1	67222542	3997
ENSMUSG00000032020	protein_coding	Ubash3b	ENSMUST00000136530	protein_coding		9	-1	41157502	424
ENSMUSG00000003585	protein_coding	Sec14l2	ENSMUST00000003681	protein_coding	principal1	11	-1	4118831	2631
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000126131	nonsense_mediated_decay		11	1	51263150	742
ENSMUSG00000026727	protein_coding	Rsu1	ENSMUST00000161912	retained_intron		2	-1	13271308	3458
ENSMUSG00000035929	protein_coding	H2-Q4	ENSMUST00000081435	protein_coding	principal1	17	1	35379617	1793
ENSMUSG00000032020	protein_coding	Ubash3b	ENSMUST00000129906	protein_coding		9	-1	41161688	354
ENSMUSG00000038578	protein_coding	Susd1	ENSMUST00000136077	retained_intron		4	-1	59362982	1433
ENSMUSG00000026727	protein_coding	Rsu1	ENSMUST00000162223	retained_intron		2	-1	13271333	1505
ENSMUSG00000026727	protein_coding	Rsu1	ENSMUST00000134551	nonsense_mediated_decay		2	-1	13271270	773
ENSMUSG00000032020	protein_coding	Ubash3b	ENSMUST00000132996	processed_transcript		9	-1	41161697	518
ENSMUSG00000038578	protein_coding	Susd1	ENSMUST00000136562	retained_intron		4	-1	59333022	598
ENSMUSG00000111337	processed_pseudogene	Gm6885	ENSMUST00000217261	processed_pseudogene		9	1	41164374	372
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000179025	processed_transcript		12	-1	67222381	1684
ENSMUSG00000035762	protein_coding	Tmem161b	ENSMUST00000223862	nonsense_mediated_decay		13	1	84222312	2561
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000176688	retained_intron		19	-1	8786281	1567
ENSMUSG00000073096	protein_coding	Lrrc61	ENSMUST00000114545	protein_coding	principal1	6	1	48554796	2913
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000223141	protein_coding		12	-1	67221042	2850
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000133200	retained_intron		11	1	51263162	442
ENSMUSG00000034912	protein_coding	Mdga2	ENSMUST00000113942	protein_coding		12	-1	66471058	423
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000176719	processed_transcript		19	-1	8782323	299
ENSMUSG00000110914	TEC	Gm48611	ENSMUST00000217288	TEC		9	-1	41112081	2555
ENSMUSG00000026727	protein_coding	Rsu1	ENSMUST00000131226	retained_intron		2	-1	13271221	841
ENSMUSG00000038578	protein_coding	Susd1	ENSMUST00000136942	retained_intron		4	-1	59315966	982
ENSMUSG00000110747	lincRNA	Gm35657	ENSMUST00000215869	lincRNA		9	1	41159424	989
ENSMUSG00000113698	TEC	Gm47987	ENSMUST00000221673	TEC		12	-1	67122920	2795
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000176991	retained_intron		19	-1	8782677	649
ENSMUSG00000026727	protein_coding	Rsu1	ENSMUST00000137670	protein_coding		2	-1	13271291	431
ENSMUSG00000035762	protein_coding	Tmem161b	ENSMUST00000225212	retained_intron		13	1	84222313	1428
ENSMUSG00000113291	processed_pseudogene	Gm19001	ENSMUST00000222736	processed_pseudogene		12	1	66482506	1651
ENSMUSG00000073096	protein_coding	Lrrc61	ENSMUST00000153222	protein_coding		6	1	48554799	374
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000176331	retained_intron		19	-1	8786265	790
ENSMUSG00000035762	protein_coding	Tmem161b	ENSMUST00000223827	nonsense_mediated_decay		13	1	84222314	2632
ENSMUSG00000082253	processed_pseudogene	Gm14639	ENSMUST00000120850	processed_pseudogene		X	-1	56156393	866
ENSMUSG00000003585	protein_coding	Sec14l2	ENSMUST00000132421	processed_transcript		11	-1	4109261	1229
ENSMUSG00000035929	protein_coding	H2-Q4	ENSMUST00000173975	retained_intron		17	1	35379617	2596
ENSMUSG00000073096	protein_coding	Lrrc61	ENSMUST00000204071	protein_coding		6	1	48554799	373
ENSMUSG00000035762	protein_coding	Tmem161b	ENSMUST00000225069	protein_coding		13	1	84222326	2414
ENSMUSG00000003585	protein_coding	Sec14l2	ENSMUST00000123901	processed_transcript		11	-1	4118696	1624
ENSMUSG00000094686	protein_coding	Ccl21a	ENSMUST00000095114	protein_coding	principal1	4	-1	42773993	870
ENSMUSG00000038578	protein_coding	Susd1	ENSMUST00000040166	protein_coding	principal1	4	-1	59438633	3295
ENSMUSG00000003585	protein_coding	Sec14l2	ENSMUST00000133631	processed_transcript		11	-1	4109011	880
ENSMUSG00000026727	protein_coding	Rsu1	ENSMUST00000129257	retained_intron		2	-1	13271311	3674
ENSMUSG00000035762	protein_coding	Tmem161b	ENSMUST00000225126	retained_intron		13	1	84222329	2607
ENSMUSG00000026727	protein_coding	Rsu1	ENSMUST00000195538	retained_intron		2	-1	13271296	537
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000189739	protein_coding		19	-1	8783999	1794
ENSMUSG00000003680	protein_coding	Taf6l	ENSMUST00000003777	protein_coding		19	-1	8783999	1869
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000136587	retained_intron		11	1	51263164	832
ENSMUSG00000079505	antisense	Gm11131	ENSMUST00000113886	antisense		17	-1	35380292	3122
ENSMUSG00000073096	protein_coding	Lrrc61	ENSMUST00000101436	protein_coding	principal1	6	1	48554805	2674
ENSMUSG00000102691	TEC	Gm37780	ENSMUST00000194117	TEC		2	-1	13163623	1873
ENSMUSG00000035762	protein_coding	Tmem161b	ENSMUST00000224525	protein_coding		13	1	84225214	162
ENSMUSG00000003585	protein_coding	Sec14l2	ENSMUST00000145173	processed_transcript		11	-1	4123415	423
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000148053	nonsense_mediated_decay		11	1	51263169	752
ENSMUSG00000118261	processed_pseudogene	Gm2518	ENSMUST00000237579	processed_pseudogene		19	1	8776266	295
ENSMUSG00000084982	unprocessed_pseudogene	Gm15275	ENSMUST00000154752	unprocessed_pseudogene		X	1	33282100	347
ENSMUSG00000022299	protein_coding	Slc25a32	ENSMUST00000022908	protein_coding	principal1	15	-1	39112716	5905
ENSMUSG00000032802	protein_coding	Srxn1	ENSMUST00000137751	processed_transcript		2	1	152105516	446
ENSMUSG00000086246	processed_pseudogene	Gm15274	ENSMUST00000131442	processed_pseudogene		X	-1	33284031	291
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000146776	retained_intron		11	1	51263174	585
ENSMUSG00000111704	processed_pseudogene	Gm47379	ENSMUST00000214877	processed_pseudogene		10	-1	48810481	204
ENSMUSG00000032802	protein_coding	Srxn1	ENSMUST00000128882	processed_transcript		2	1	152105516	375
ENSMUSG00000003585	protein_coding	Sec14l2	ENSMUST00000136420	processed_transcript		11	-1	4118753	429
ENSMUSG00000035762	protein_coding	Tmem161b	ENSMUST00000225708	nonsense_mediated_decay		13	1	84251271	772
ENSMUSG00000111298	processed_pseudogene	Gm3473	ENSMUST00000216911	processed_pseudogene		10	1	48852431	1096
ENSMUSG00000073096	protein_coding	Lrrc61	ENSMUST00000146245	processed_transcript		6	1	48554811	308
ENSMUSG00000108205	processed_pseudogene	Gm19252	ENSMUST00000204705	processed_pseudogene		6	-1	14081635	305
ENSMUSG00000101125	lincRNA	Gm29625	ENSMUST00000188079	lincRNA		Y	1	63901888	1499
ENSMUSG00000111433	TEC	Gm47378	ENSMUST00000215914	TEC		10	1	48868578	1668
ENSMUSG00000111486	TEC	Gm47380	ENSMUST00000216221	TEC		10	1	48910116	418
ENSMUSG00000114602	sense_intronic	Gm49223	ENSMUST00000224744	sense_intronic		13	1	84274844	395
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000109113	protein_coding		11	1	51263186	1627
ENSMUSG00000111611	protein_coding	Olfr157	ENSMUST00000214281	protein_coding	principal1	4	-1	43840201	6617
ENSMUSG00000101125	lincRNA	Gm29625	ENSMUST00000191394	lincRNA		Y	1	63902341	438
ENSMUSG00000073096	protein_coding	Lrrc61	ENSMUST00000203627	protein_coding		6	1	48554829	666
ENSMUSG00000022299	protein_coding	Slc25a32	ENSMUST00000228160	nonsense_mediated_decay		15	-1	39112632	1837
ENSMUSG00000101500	protein_coding	Btbd35f12	ENSMUST00000178827	protein_coding	principal1	X	1	33313379	1908
ENSMUSG00000111611	protein_coding	Olfr157	ENSMUST00000215442	protein_coding	principal1	4	-1	43836517	1766
ENSMUSG00000101412	lincRNA	Gm28131	ENSMUST00000187841	lincRNA		Y	-1	29590910	1493
ENSMUSG00000022299	protein_coding	Slc25a32	ENSMUST00000227323	protein_coding		15	-1	39112673	979
ENSMUSG00000082562	processed_pseudogene	Gm11726	ENSMUST00000121028	processed_pseudogene		11	1	117921905	424
ENSMUSG00000022299	protein_coding	Slc25a32	ENSMUST00000226144	retained_intron		15	-1	39112673	653
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000148467	retained_intron		11	1	51271999	3543
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000109111	protein_coding		11	1	51273451	1427
ENSMUSG00000097480	processed_pseudogene	Gm9499	ENSMUST00000180888	processed_pseudogene		1	-1	97002783	964
ENSMUSG00000087224	processed_pseudogene	Gm2182	ENSMUST00000145243	processed_pseudogene		X	-1	33352936	663
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000140628	retained_intron		11	1	51273612	705
ENSMUSG00000101412	lincRNA	Gm28131	ENSMUST00000186893	lincRNA		Y	-1	29590457	615
ENSMUSG00000101412	lincRNA	Gm28131	ENSMUST00000187050	lincRNA		Y	-1	29590457	434
ENSMUSG00000100454	lincRNA	Gm28901	ENSMUST00000188810	lincRNA		1	-1	97025565	474
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000147007	retained_intron		11	1	51274908	521
ENSMUSG00000114725	processed_pseudogene	Gm2854	ENSMUST00000225812	processed_pseudogene		X	1	33399358	766
ENSMUSG00000044757	processed_pseudogene	Gm6430	ENSMUST00000054664	processed_pseudogene		1	1	97024681	1248
ENSMUSG00000032802	protein_coding	Srxn1	ENSMUST00000041500	protein_coding	principal1	2	1	152105524	2812
ENSMUSG00000020385	protein_coding	Clk4	ENSMUST00000143468	retained_intron		11	1	51280109	421
ENSMUSG00000021676	protein_coding	Iqgap2	ENSMUST00000068603	protein_coding	principal1	13	-1	95891995	5847
ENSMUSG00000079603	lincRNA	Gm13218	ENSMUST00000128180	lincRNA		2	-1	9597843	265
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000097774	protein_coding	alternative2	4	-1	151861876	8533
ENSMUSG00000107403	processed_pseudogene	Gm8820	ENSMUST00000204077	processed_pseudogene		6	-1	14390051	571
ENSMUSG00000094747	protein_coding	Olfr1307	ENSMUST00000099604	protein_coding	principal1	2	-1	111949440	15582
ENSMUSG00000069135	protein_coding	Fgfr1op	ENSMUST00000097419	protein_coding	alternative2	17	1	8165501	3505
ENSMUSG00000104276	TEC	Gm37866	ENSMUST00000191950	TEC		2	-1	9631341	696
ENSMUSG00000107657	processed_pseudogene	Gm44446	ENSMUST00000204864	processed_pseudogene		6	-1	14571025	255
ENSMUSG00000071005	protein_coding	Ccl19	ENSMUST00000102957	protein_coding	principal2	4	-1	42756543	745
ENSMUSG00000094747	protein_coding	Olfr1307	ENSMUST00000099606	protein_coding	principal1	2	-1	111945454	939
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000140030	protein_coding		4	-1	151079793	3983
ENSMUSG00000081024	processed_pseudogene	Gm14627	ENSMUST00000118931	processed_pseudogene		X	1	56190932	567
ENSMUSG00000021676	protein_coding	Iqgap2	ENSMUST00000238404	retained_intron		13	-1	95661098	681
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000182715	nonsense_mediated_decay		8	1	70172405	2516
ENSMUSG00000030104	protein_coding	Edem1	ENSMUST00000204804	nonsense_mediated_decay		6	1	108828641	6077
ENSMUSG00000069135	protein_coding	Fgfr1op	ENSMUST00000162586	retained_intron		17	1	8165520	1159
ENSMUSG00000053044	protein_coding	Cd8b1	ENSMUST00000065248	protein_coding	principal1	6	1	71322788	1483
ENSMUSG00000099663	processed_pseudogene	Gm29201	ENSMUST00000189120	processed_pseudogene		18	1	12365799	431
ENSMUSG00000009281	protein_coding	Rarres2	ENSMUST00000203541	retained_intron		6	-1	48572646	2513
ENSMUSG00000113245	TEC	Gm48574	ENSMUST00000221551	TEC		13	-1	8885823	910
ENSMUSG00000074952	protein_coding	Olfr1308	ENSMUST00000207560	protein_coding	principal1	2	-1	111964944	2093
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000049790	protein_coding	principal2	4	-1	151861746	8423
ENSMUSG00000117800	processed_transcript	1700122C19Rik	ENSMUST00000235249	retained_intron		19	1	37465253	6582
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000074575	protein_coding	principal1	7	-1	45395742	1735
ENSMUSG00000074952	protein_coding	Olfr1308	ENSMUST00000099605	protein_coding	principal1	2	-1	111961071	963
ENSMUSG00000021676	protein_coding	Iqgap2	ENSMUST00000238392	processed_transcript		13	-1	95665700	628
ENSMUSG00000117800	processed_transcript	1700122C19Rik	ENSMUST00000236282	lincRNA		19	1	37465254	647
ENSMUSG00000071005	protein_coding	Ccl19	ENSMUST00000134240	processed_transcript		4	-1	42756577	646
ENSMUSG00000071005	protein_coding	Ccl19	ENSMUST00000140546	protein_coding	alternative2	4	-1	42756489	773
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000210514	protein_coding		7	-1	45383885	451
ENSMUSG00000107855	lincRNA	Gm44110	ENSMUST00000203871	lincRNA		6	-1	71339535	475
ENSMUSG00000021676	protein_coding	Iqgap2	ENSMUST00000238595	retained_intron		13	-1	95682937	1499
ENSMUSG00000069135	protein_coding	Fgfr1op	ENSMUST00000024636	protein_coding	principal3	17	1	8165540	3077
ENSMUSG00000107959	processed_pseudogene	Gm44111	ENSMUST00000204649	processed_pseudogene		6	1	71349331	399
ENSMUSG00000109528	protein_coding	Olfr1309	ENSMUST00000216948	protein_coding	principal1	2	-1	111990273	5168
ENSMUSG00000021676	protein_coding	Iqgap2	ENSMUST00000238783	retained_intron		13	-1	95671519	382
ENSMUSG00000109528	protein_coding	Olfr1309	ENSMUST00000215045	protein_coding	principal1	2	-1	111990281	5236
ENSMUSG00000078722	protein_coding	Gm12394	ENSMUST00000107981	protein_coding	principal1	4	-1	42856771	3348
ENSMUSG00000021676	protein_coding	Iqgap2	ENSMUST00000238263	retained_intron		13	-1	95682324	277
ENSMUSG00000109528	protein_coding	Olfr1309	ENSMUST00000214537	protein_coding	principal1	2	-1	111985309	4274
ENSMUSG00000109528	protein_coding	Olfr1309	ENSMUST00000214935	protein_coding	principal1	2	-1	111990273	5448
ENSMUSG00000069135	protein_coding	Fgfr1op	ENSMUST00000161898	protein_coding		17	1	8182247	855
ENSMUSG00000109528	protein_coding	Olfr1309	ENSMUST00000217452	protein_coding	principal1	2	-1	111990274	5257
ENSMUSG00000108132	lincRNA	Gm44175	ENSMUST00000204863	lincRNA		6	-1	71360829	4256
ENSMUSG00000109528	protein_coding	Olfr1309	ENSMUST00000207885	protein_coding		2	-1	111984097	964
ENSMUSG00000054885	protein_coding	4930578G10Rik	ENSMUST00000145453	processed_transcript		4	1	42735545	426
ENSMUSG00000030104	protein_coding	Edem1	ENSMUST00000089162	protein_coding	principal1	6	1	108828674	5817
ENSMUSG00000108289	lincRNA	Gm44174	ENSMUST00000205022	lincRNA		6	1	71353035	141
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000105670	protein_coding		4	-1	151108576	4961
ENSMUSG00000054885	protein_coding	4930578G10Rik	ENSMUST00000107984	protein_coding	principal1	4	1	42735912	762
ENSMUSG00000054885	protein_coding	4930578G10Rik	ENSMUST00000068158	protein_coding	principal1	4	1	42735545	614
ENSMUSG00000030104	protein_coding	Edem1	ENSMUST00000203469	processed_transcript		6	1	108836410	368
ENSMUSG00000025878	protein_coding	Uimc1	ENSMUST00000127195	protein_coding	alternative2	13	-1	55100300	2936
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000105668	protein_coding		4	-1	151129495	4962
ENSMUSG00000109313	lincRNA	Gm44693	ENSMUST00000208141	lincRNA		8	-1	5440990	460
ENSMUSG00000114699	unprocessed_pseudogene	Vmn1r-ps131	ENSMUST00000226063	unprocessed_pseudogene		13	-1	23198597	250
ENSMUSG00000021676	protein_coding	Iqgap2	ENSMUST00000238515	processed_transcript		13	-1	95892483	599
ENSMUSG00000030104	protein_coding	Edem1	ENSMUST00000204524	retained_intron		6	1	108848632	803
ENSMUSG00000021676	protein_coding	Iqgap2	ENSMUST00000238261	retained_intron		13	-1	95891757	632
ENSMUSG00000030104	protein_coding	Edem1	ENSMUST00000203302	retained_intron		6	1	108852391	459
ENSMUSG00000082852	processed_pseudogene	Gm12021	ENSMUST00000121061	processed_pseudogene		11	-1	18509940	1746
ENSMUSG00000073177	protein_coding	Gm773	ENSMUST00000101561	protein_coding	principal1	X	-1	56212881	951
ENSMUSG00000081101	processed_pseudogene	Gm12024	ENSMUST00000118819	processed_pseudogene		11	-1	18578479	1253
ENSMUSG00000052026	protein_coding	Slc6a7	ENSMUST00000025520	protein_coding	principal1	18	-1	61014222	3366
ENSMUSG00000025878	protein_coding	Uimc1	ENSMUST00000148702	nonsense_mediated_decay		13	-1	55100254	2489
ENSMUSG00000021676	protein_coding	Iqgap2	ENSMUST00000238496	processed_transcript		13	-1	95764397	540
ENSMUSG00000080794	unprocessed_pseudogene	Vmn1r-ps132	ENSMUST00000120434	unprocessed_pseudogene		13	-1	23202052	892
ENSMUSG00000054453	protein_coding	Sytl5	ENSMUST00000067529	protein_coding	principal3	X	1	9885622	2301
ENSMUSG00000022781	protein_coding	Pak2	ENSMUST00000023467	protein_coding	principal1	16	-1	32079342	5741
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000143434	processed_transcript		4	-1	151139584	725
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000131948	protein_coding		4	-1	151108303	372
ENSMUSG00000052026	protein_coding	Slc6a7	ENSMUST00000236893	processed_transcript		18	-1	61014206	472
ENSMUSG00000118445	antisense	Gm50469	ENSMUST00000238396	antisense		13	1	95707494	594
ENSMUSG00000025878	protein_coding	Uimc1	ENSMUST00000099496	protein_coding		13	-1	55100300	1678
ENSMUSG00000073177	protein_coding	Gm773	ENSMUST00000126937	processed_transcript		X	-1	56212881	573
ENSMUSG00000113631	TEC	Gm48745	ENSMUST00000221667	TEC		13	1	95685145	1665
ENSMUSG00000054453	protein_coding	Sytl5	ENSMUST00000086165	protein_coding	alternative2	X	1	9885622	2235
ENSMUSG00000074282	protein_coding	Zfp94	ENSMUST00000108436	protein_coding	alternative2	7	-1	24316605	2599
ENSMUSG00000085806	lincRNA	Gm12023	ENSMUST00000145182	lincRNA		11	-1	18710222	520
ENSMUSG00000038486	protein_coding	Sv2a	ENSMUST00000035371	protein_coding	principal1	3	1	96181151	4334
ENSMUSG00000022781	protein_coding	Pak2	ENSMUST00000125019	retained_intron		16	-1	32044000	1234
ENSMUSG00000059033	processed_pseudogene	Rpl18a-ps1	ENSMUST00000161190	processed_pseudogene		12	-1	55396229	523
ENSMUSG00000101986	processed_pseudogene	Gm6198	ENSMUST00000191337	processed_pseudogene		1	-1	81557483	2929
ENSMUSG00000054069	lincRNA	6030452D12Rik	ENSMUST00000066875	lincRNA		8	1	106500505	3000
ENSMUSG00000109266	processed_pseudogene	Gm6426	ENSMUST00000209048	processed_pseudogene		8	1	5527689	854
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000155685	processed_transcript		4	-1	151861650	1814
ENSMUSG00000087413	antisense	Gm11266	ENSMUST00000139835	antisense		4	1	82508016	1271
ENSMUSG00000025878	protein_coding	Uimc1	ENSMUST00000133187	retained_intron		13	-1	55100299	2735
ENSMUSG00000038486	protein_coding	Sv2a	ENSMUST00000133665	retained_intron		3	1	96186671	740
ENSMUSG00000102866	processed_pseudogene	Gm37636	ENSMUST00000193583	processed_pseudogene		3	-1	22349612	359
ENSMUSG00000025878	protein_coding	Uimc1	ENSMUST00000128641	retained_intron		13	-1	55086192	654
ENSMUSG00000049133	protein_coding	Flg2	ENSMUST00000194707	processed_transcript		3	1	93197278	20803
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000153938	nonsense_mediated_decay		4	-1	151861704	2178
ENSMUSG00000038486	protein_coding	Sv2a	ENSMUST00000196912	processed_transcript		3	1	96192546	432
ENSMUSG00000086293	antisense	Gm11269	ENSMUST00000157011	antisense		4	1	82692805	595
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000185034	processed_transcript		4	-1	151861704	2198
ENSMUSG00000025878	protein_coding	Uimc1	ENSMUST00000124561	retained_intron		13	-1	55093508	438
ENSMUSG00000082316	protein_coding	Vmn1r221	ENSMUST00000236177	protein_coding	principal1	13	1	23214127	5953
ENSMUSG00000049133	protein_coding	Flg2	ENSMUST00000098884	protein_coding	principal1	3	1	93200210	7011
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000135780	processed_transcript		4	-1	151861738	506
ENSMUSG00000087649	processed_pseudogene	Gm21979	ENSMUST00000139887	processed_pseudogene		X	1	33426304	291
ENSMUSG00000087008	processed_pseudogene	Gm5530	ENSMUST00000117185	processed_pseudogene		1	-1	81742969	985
ENSMUSG00000082316	protein_coding	Vmn1r221	ENSMUST00000122275	protein_coding	principal1	13	1	23217373	939
ENSMUSG00000085552	processed_pseudogene	Gm21990	ENSMUST00000124692	processed_pseudogene		X	-1	33428276	383
ENSMUSG00000114811	unprocessed_pseudogene	Vmn1r-ps133	ENSMUST00000225143	unprocessed_pseudogene		13	-1	23228752	330
ENSMUSG00000084851	sense_intronic	Gm11267	ENSMUST00000137477	sense_intronic		4	-1	82587319	1071
ENSMUSG00000103801	processed_pseudogene	Spin3-ps	ENSMUST00000192825	processed_pseudogene		3	1	22525238	770
ENSMUSG00000014592	protein_coding	Camta1	ENSMUST00000169423	protein_coding	principal2	4	-1	151861669	5208
ENSMUSG00000074282	protein_coding	Zfp94	ENSMUST00000032673	protein_coding	principal3	7	-1	24316666	2529
ENSMUSG00000084357	processed_pseudogene	Gm11268	ENSMUST00000118347	processed_pseudogene		4	1	82642400	267
ENSMUSG00000079649	processed_pseudogene	Gm2892	ENSMUST00000145537	processed_pseudogene		X	-1	33477692	711
ENSMUSG00000085004	antisense	5430427M07Rik	ENSMUST00000221524	antisense		12	1	91045848	1023
ENSMUSG00000116893	processed_pseudogene	Gm49717	ENSMUST00000231691	processed_pseudogene		17	1	6790793	451
ENSMUSG00000085004	antisense	5430427M07Rik	ENSMUST00000129932	antisense		12	1	91050369	219
ENSMUSG00000113983	processed_pseudogene	Gm47742	ENSMUST00000220984	processed_pseudogene		12	1	91159861	413
ENSMUSG00000100561	processed_pseudogene	Gm7516	ENSMUST00000186198	processed_pseudogene		1	1	81797241	706
ENSMUSG00000114086	processed_pseudogene	Gm18968	ENSMUST00000221319	processed_pseudogene		12	1	91142787	862
ENSMUSG00000061022	protein_coding	Vmn1r222	ENSMUST00000235574	protein_coding	principal1	13	-1	23235947	2697
ENSMUSG00000061022	protein_coding	Vmn1r222	ENSMUST00000226672	protein_coding	principal1	13	-1	23235947	2457
ENSMUSG00000074282	protein_coding	Zfp94	ENSMUST00000146817	retained_intron		7	-1	24309396	574
ENSMUSG00000116644	lincRNA	4933426B08Rik	ENSMUST00000231816	lincRNA		17	1	6808509	1299
ENSMUSG00000102233	TEC	Gm37889	ENSMUST00000194174	TEC		3	1	22812207	251
ENSMUSG00000074282	protein_coding	Zfp94	ENSMUST00000137781	processed_transcript		7	-1	24316624	902
ENSMUSG00000025878	protein_coding	Uimc1	ENSMUST00000026997	protein_coding	principal2	13	-1	55100295	2931
ENSMUSG00000061022	protein_coding	Vmn1r222	ENSMUST00000077116	protein_coding	principal1	13	-1	23233119	1054
ENSMUSG00000074282	protein_coding	Zfp94	ENSMUST00000126580	retained_intron		7	-1	24316608	600
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000101164	protein_coding	principal2	5	1	66745845	5192
ENSMUSG00000074282	protein_coding	Zfp94	ENSMUST00000154309	processed_transcript		7	-1	24316582	610
ENSMUSG00000026688	protein_coding	Mgst3	ENSMUST00000028005	protein_coding	principal1	1	-1	167393841	1097
ENSMUSG00000071000	protein_coding	Olfr155	ENSMUST00000107860	protein_coding	principal1	4	1	43851565	3480
ENSMUSG00000028963	protein_coding	Uts2	ENSMUST00000030803	protein_coding	principal1	4	1	150997097	538
ENSMUSG00000099449	lincRNA	Gm28401	ENSMUST00000190769	lincRNA		11	-1	18756738	550
ENSMUSG00000071000	protein_coding	Olfr155	ENSMUST00000095108	protein_coding	principal1	4	1	43854292	1172
ENSMUSG00000099449	lincRNA	Gm28401	ENSMUST00000188856	lincRNA		11	-1	18756757	607
ENSMUSG00000043192	processed_pseudogene	Gpi-ps	ENSMUST00000051687	processed_pseudogene		8	1	5639580	1432
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000238785	protein_coding	alternative2	5	1	66745845	7498
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000202830	retained_intron		5	1	66745867	2538
ENSMUSG00000112569	lincRNA	Gm33111	ENSMUST00000219954	lincRNA		12	-1	32080850	3388
ENSMUSG00000046438	protein_coding	Scgb2b24	ENSMUST00000055444	protein_coding	principal1	7	-1	33739312	523
ENSMUSG00000069280	protein_coding	Vmn1r223	ENSMUST00000235331	protein_coding	principal1	13	1	23247134	5028
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000118242	protein_coding	alternative2	5	1	66745883	5050
ENSMUSG00000112569	lincRNA	Gm33111	ENSMUST00000219617	lincRNA		12	-1	32080843	257
ENSMUSG00000069280	protein_coding	Vmn1r223	ENSMUST00000236495	protein_coding	principal1	13	1	23247134	5146
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000130228	nonsense_mediated_decay		5	1	66745889	360
ENSMUSG00000069280	protein_coding	Vmn1r223	ENSMUST00000238002	protein_coding	principal1	13	1	23247134	5636
ENSMUSG00000069280	protein_coding	Vmn1r223	ENSMUST00000091719	protein_coding	principal1	13	1	23249238	1086
ENSMUSG00000009281	protein_coding	Rarres2	ENSMUST00000009425	protein_coding	alternative2	6	-1	48572688	731
ENSMUSG00000112071	lincRNA	5430401H09Rik	ENSMUST00000218145	lincRNA		12	-1	32123702	1076
ENSMUSG00000058258	protein_coding	Idi1	ENSMUST00000169314	protein_coding	principal1	13	1	8885501	3027
ENSMUSG00000112071	lincRNA	5430401H09Rik	ENSMUST00000218836	lincRNA		12	-1	32123702	2620
ENSMUSG00000024188	protein_coding	Luc7l	ENSMUST00000025023	protein_coding	alternative2	17	1	26252896	1700
ENSMUSG00000068079	protein_coding	Tcf15	ENSMUST00000089112	protein_coding	principal1	2	1	152143561	980
ENSMUSG00000108567	processed_pseudogene	Gm44513	ENSMUST00000206811	processed_pseudogene		7	1	24318381	439
ENSMUSG00000082802	processed_pseudogene	Gm15465	ENSMUST00000120368	processed_pseudogene		7	-1	24322784	358
ENSMUSG00000058258	protein_coding	Idi1	ENSMUST00000177397	protein_coding		13	1	8885943	737
ENSMUSG00000118562	processed_pseudogene	AC159140.1	ENSMUST00000238952	processed_pseudogene		7	-1	24327793	1027
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000154028	processed_transcript		2	-1	91183818	5608
ENSMUSG00000058258	protein_coding	Idi1	ENSMUST00000177400	protein_coding		13	1	8885993	581
ENSMUSG00000021024	protein_coding	Psma6	ENSMUST00000163070	protein_coding		12	1	55384222	787
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000150461	processed_transcript		2	-1	91183818	5667
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000125321	processed_transcript		2	-1	91183818	5653
ENSMUSG00000058258	protein_coding	Idi1	ENSMUST00000177447	protein_coding		13	1	8885994	745
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000153688	processed_transcript		2	-1	91183818	5581
ENSMUSG00000052374	protein_coding	Actn2	ENSMUST00000064204	protein_coding	principal1	13	-1	12340760	3013
ENSMUSG00000055826	protein_coding	Tescl	ENSMUST00000069562	protein_coding	principal1	7	-1	24333936	855
ENSMUSG00000009281	protein_coding	Rarres2	ENSMUST00000204267	protein_coding	principal3	6	-1	48572755	795
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000125227	processed_transcript		2	-1	91183818	5480
ENSMUSG00000058258	protein_coding	Idi1	ENSMUST00000176851	retained_intron		13	1	8887069	768
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000156368	retained_intron		2	-1	91139256	600
ENSMUSG00000085114	lincRNA	1600025M17Rik	ENSMUST00000151426	lincRNA		X	1	56317608	547
ENSMUSG00000009281	protein_coding	Rarres2	ENSMUST00000204930	protein_coding	principal3	6	-1	48572787	681
ENSMUSG00000085114	lincRNA	1600025M17Rik	ENSMUST00000138262	lincRNA		X	1	56317666	666
ENSMUSG00000021024	protein_coding	Psma6	ENSMUST00000021412	protein_coding	principal1	12	1	55398775	1042
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000130591	retained_intron		2	-1	91154951	843
ENSMUSG00000118305	processed_pseudogene	Gm50131	ENSMUST00000237376	processed_pseudogene		19	-1	8790464	380
ENSMUSG00000052374	protein_coding	Actn2	ENSMUST00000222034	processed_transcript		13	-1	12274096	501
ENSMUSG00000081087	processed_pseudogene	Rps15a-ps7	ENSMUST00000117430	processed_pseudogene		2	-1	152185682	392
ENSMUSG00000009281	protein_coding	Rarres2	ENSMUST00000204182	protein_coding	alternative2	6	-1	48572789	672
ENSMUSG00000052374	protein_coding	Actn2	ENSMUST00000221162	protein_coding		13	-1	12282547	576
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000122812	protein_coding		5	1	66898431	520
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000135910	retained_intron		2	-1	91152491	562
ENSMUSG00000099338	bidirectional_promoter_lncRNA	2810030D12Rik	ENSMUST00000190673	bidirectional_promoter_lncRNA		8	1	13200720	913
ENSMUSG00000118619	unitary_pseudogene	AC154013.1	ENSMUST00000239256	unitary_pseudogene		6	1	48564365	1773
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000117601	protein_coding		5	1	66898460	3157
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000132791	retained_intron		2	-1	91154795	675
ENSMUSG00000099338	bidirectional_promoter_lncRNA	2810030D12Rik	ENSMUST00000185622	bidirectional_promoter_lncRNA		8	1	13200728	755
ENSMUSG00000021024	protein_coding	Psma6	ENSMUST00000162711	nonsense_mediated_decay		12	1	55398795	914
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000146097	retained_intron		2	-1	91160357	737
ENSMUSG00000052374	protein_coding	Actn2	ENSMUST00000110616	retained_intron		13	-1	12340732	1361
ENSMUSG00000024188	protein_coding	Luc7l	ENSMUST00000114976	protein_coding	principal4	17	1	26252951	4934
ENSMUSG00000021024	protein_coding	Psma6	ENSMUST00000162972	processed_transcript		12	1	55407383	520
ENSMUSG00000099338	bidirectional_promoter_lncRNA	2810030D12Rik	ENSMUST00000190461	bidirectional_promoter_lncRNA		8	1	13200752	1039
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000130395	retained_intron		2	-1	91183026	4655
ENSMUSG00000052374	protein_coding	Actn2	ENSMUST00000168193	protein_coding	principal1	13	-1	12340724	2920
ENSMUSG00000099338	bidirectional_promoter_lncRNA	2810030D12Rik	ENSMUST00000187595	bidirectional_promoter_lncRNA		8	1	13200820	856
ENSMUSG00000024188	protein_coding	Luc7l	ENSMUST00000140427	protein_coding		17	1	26252956	657
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000066420	protein_coding		2	-1	91183047	3753
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000201322	processed_transcript		5	1	66968005	3356
ENSMUSG00000024188	protein_coding	Luc7l	ENSMUST00000119928	protein_coding	alternative2	17	1	26252966	1441
ENSMUSG00000042717	protein_coding	Ppp1r3a	ENSMUST00000045096	protein_coding	principal1	6	-1	14755274	6965
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000140600	protein_coding		2	-1	91175729	791
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000135715	retained_intron		2	-1	91183837	1092
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000150517	processed_transcript		2	-1	91183039	260
ENSMUSG00000083838	processed_pseudogene	Gm11957	ENSMUST00000118304	processed_pseudogene		11	-1	4130150	779
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000238993	protein_coding		5	1	66968416	5981
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000038188	protein_coding		5	1	66968416	5903
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000140428	retained_intron		5	1	66968565	2458
ENSMUSG00000072720	protein_coding	Myo18b	ENSMUST00000086617	protein_coding	principal1	5	-1	112896362	8280
ENSMUSG00000038224	protein_coding	Serpinf2	ENSMUST00000108437	protein_coding	principal1	11	-1	75438900	2179
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000127184	protein_coding		5	1	66968577	852
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000066473	protein_coding	principal4	2	-1	91183818	5974
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000202048	retained_intron		5	1	66968650	786
ENSMUSG00000110127	TEC	6430710M23Rik	ENSMUST00000210843	TEC		8	-1	25745580	1191
ENSMUSG00000040687	protein_coding	Madd	ENSMUST00000099725	protein_coding	principal4	2	-1	91179321	5905
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000211366	retained_intron		7	-1	45395658	4008
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000132991	protein_coding		5	1	66968961	876
ENSMUSG00000038224	protein_coding	Serpinf2	ENSMUST00000128330	protein_coding		11	-1	75439591	981
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000119854	protein_coding		5	1	66974543	4185
ENSMUSG00000072720	protein_coding	Myo18b	ENSMUST00000182189	processed_transcript		5	-1	112765931	2510
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000147050	processed_transcript		5	1	66977018	624
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000211290	retained_intron		7	-1	45395692	3035
ENSMUSG00000103912	lincRNA	Gm33819	ENSMUST00000194008	lincRNA		3	-1	15171442	1221
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000137394	retained_intron		5	1	66997092	680
ENSMUSG00000091514	lincRNA	Gm17484	ENSMUST00000167899	lincRNA		8	1	25754480	2322
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000211211	protein_coding		7	-1	45383885	462
ENSMUSG00000038224	protein_coding	Serpinf2	ENSMUST00000142094	nonsense_mediated_decay		11	-1	75439578	803
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000135334	processed_transcript		5	1	67043849	735
ENSMUSG00000026331	protein_coding	Slco6c1	ENSMUST00000027569	protein_coding	principal2	1	-1	97128206	2747
ENSMUSG00000024188	protein_coding	Luc7l	ENSMUST00000154235	retained_intron		17	1	26252966	2704
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000218940	retained_intron		12	1	44328885	2610
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000209993	nonsense_mediated_decay		7	-1	45392321	707
ENSMUSG00000029634	protein_coding	Rnf6	ENSMUST00000161859	protein_coding	principal1	5	-1	146221555	3452
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000210661	retained_intron		7	-1	45381317	618
ENSMUSG00000078783	protein_coding	Gm9733	ENSMUST00000108361	protein_coding	principal1	3	-1	15332302	618
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000211178	retained_intron		7	-1	45384274	2922
ENSMUSG00000026331	protein_coding	Slco6c1	ENSMUST00000189547	protein_coding	alternative2	1	-1	97128301	2315
ENSMUSG00000024188	protein_coding	Luc7l	ENSMUST00000133032	retained_intron		17	1	26252984	2670
ENSMUSG00000038224	protein_coding	Serpinf2	ENSMUST00000043696	protein_coding	principal1	11	-1	75439501	2192
ENSMUSG00000022797	protein_coding	Tfrc	ENSMUST00000023486	protein_coding	principal1	16	1	32608920	4890
ENSMUSG00000001349	protein_coding	Cnn1	ENSMUST00000214601	protein_coding		9	1	22099216	1225
ENSMUSG00000037736	protein_coding	Limch1	ENSMUST00000153174	nonsense_mediated_decay		5	1	67044401	435
ENSMUSG00000024188	protein_coding	Luc7l	ENSMUST00000148894	nonsense_mediated_decay		17	1	26252999	1672
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000210495	retained_intron		7	-1	45394799	733
ENSMUSG00000024188	protein_coding	Luc7l	ENSMUST00000155151	processed_transcript		17	1	26253222	763
ENSMUSG00000024188	protein_coding	Luc7l	ENSMUST00000152107	protein_coding		17	1	26267275	715
ENSMUSG00000086699	processed_pseudogene	Gm16510	ENSMUST00000153501	processed_pseudogene		2	-1	70618876	249
ENSMUSG00000107290	TEC	Gm43282	ENSMUST00000201848	TEC		5	1	66969429	2157
ENSMUSG00000022797	protein_coding	Tfrc	ENSMUST00000120680	protein_coding		16	1	32608983	1860
ENSMUSG00000022797	protein_coding	Tfrc	ENSMUST00000124243	protein_coding		16	1	32609250	166
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000210374	retained_intron		7	-1	45387770	623
ENSMUSG00000082420	processed_pseudogene	Gm6517	ENSMUST00000121056	processed_pseudogene		5	1	66890366	511
ENSMUSG00000089764	processed_pseudogene	Gm16580	ENSMUST00000162696	processed_pseudogene		17	1	26269337	1048
ENSMUSG00000106785	TEC	Gm42713	ENSMUST00000202709	TEC		5	-1	67039376	945
ENSMUSG00000022797	protein_coding	Tfrc	ENSMUST00000137901	retained_intron		16	1	32615232	571
ENSMUSG00000029634	protein_coding	Rnf6	ENSMUST00000067837	protein_coding	principal1	5	-1	146220976	2388
ENSMUSG00000087338	antisense	Scpep1os	ENSMUST00000139592	antisense		11	1	88905928	811
ENSMUSG00000022797	protein_coding	Tfrc	ENSMUST00000155929	retained_intron		16	1	32618279	808
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000211378	nonsense_mediated_decay		7	-1	45395172	616
ENSMUSG00000022797	protein_coding	Tfrc	ENSMUST00000231912	retained_intron		16	1	32620389	714
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000143415	nonsense_mediated_decay		12	-1	91266933	3045
ENSMUSG00000029634	protein_coding	Rnf6	ENSMUST00000162219	protein_coding		5	-1	146217989	812
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000209858	protein_coding		7	-1	45395194	618
ENSMUSG00000048271	protein_coding	Rbm33	ENSMUST00000090355	non_stop_decay		5	1	28317121	1032
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000209237	retained_intron		7	-1	45394719	601
ENSMUSG00000022797	protein_coding	Tfrc	ENSMUST00000128285	retained_intron		16	1	32624442	3527
ENSMUSG00000047592	protein_coding	Nxpe5	ENSMUST00000162519	protein_coding		5	1	138225898	1552
ENSMUSG00000029634	protein_coding	Rnf6	ENSMUST00000161574	protein_coding		5	-1	146221418	909
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000211121	protein_coding		7	-1	45395709	620
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000210970	processed_transcript		7	-1	45392778	212
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000210583	retained_intron		7	-1	45392884	1897
ENSMUSG00000001349	protein_coding	Cnn1	ENSMUST00000001384	protein_coding	principal1	9	1	22099268	2381
ENSMUSG00000072720	protein_coding	Myo18b	ENSMUST00000183029	processed_transcript		5	-1	112871586	5690
ENSMUSG00000029634	protein_coding	Rnf6	ENSMUST00000161331	protein_coding		5	-1	146220935	802
ENSMUSG00000063511	protein_coding	Snrnp70	ENSMUST00000210808	retained_intron		7	-1	45395557	579
ENSMUSG00000030811	protein_coding	Fbxl19	ENSMUST00000205689	protein_coding		7	1	127744543	448
ENSMUSG00000029634	protein_coding	Rnf6	ENSMUST00000159074	protein_coding		5	-1	146220948	542
ENSMUSG00000072720	protein_coding	Myo18b	ENSMUST00000183273	nonsense_mediated_decay		5	-1	112872496	2817
ENSMUSG00000029634	protein_coding	Rnf6	ENSMUST00000161725	processed_transcript		5	-1	146220946	563
ENSMUSG00000026842	protein_coding	Abl1	ENSMUST00000075759	protein_coding	alternative2	2	1	31688551	6327
ENSMUSG00000001349	protein_coding	Cnn1	ENSMUST00000213607	protein_coding		9	1	22100192	370
ENSMUSG00000001349	protein_coding	Cnn1	ENSMUST00000216872	protein_coding		9	1	22101061	868
ENSMUSG00000029634	protein_coding	Rnf6	ENSMUST00000169407	protein_coding	principal1	5	-1	146220901	3276
ENSMUSG00000012640	protein_coding	Zfp715	ENSMUST00000012796	protein_coding		7	-1	43313247	907
ENSMUSG00000001349	protein_coding	Cnn1	ENSMUST00000216141	processed_transcript		9	1	22104445	647
ENSMUSG00000012640	protein_coding	Zfp715	ENSMUST00000048015	protein_coding	principal1	7	-1	43311486	4333
ENSMUSG00000010476	protein_coding	Ebf3	ENSMUST00000033378	protein_coding	principal3	7	-1	137314445	4838
ENSMUSG00000102609	processed_pseudogene	Gm18432	ENSMUST00000195568	processed_pseudogene		3	1	93234920	1451
ENSMUSG00000012640	protein_coding	Zfp715	ENSMUST00000107986	protein_coding	principal1	7	-1	43313255	4184
ENSMUSG00000081898	processed_pseudogene	Gm5754	ENSMUST00000118774	processed_pseudogene		X	1	10011788	892
ENSMUSG00000098230	antisense	1700095B10Rik	ENSMUST00000182801	antisense		5	1	112793292	950
ENSMUSG00000026842	protein_coding	Abl1	ENSMUST00000142554	nonsense_mediated_decay		2	1	31688552	3268
ENSMUSG00000026842	protein_coding	Abl1	ENSMUST00000123471	protein_coding		2	1	31689465	534
ENSMUSG00000098230	antisense	1700095B10Rik	ENSMUST00000189538	antisense		5	1	112793300	589
ENSMUSG00000025383	protein_coding	Il23a	ENSMUST00000026449	protein_coding	principal1	10	-1	128298084	1360
ENSMUSG00000012640	protein_coding	Zfp715	ENSMUST00000145622	nonsense_mediated_decay		7	-1	43313263	4363
ENSMUSG00000012640	protein_coding	Zfp715	ENSMUST00000139061	protein_coding		7	-1	43313095	705
ENSMUSG00000026842	protein_coding	Abl1	ENSMUST00000135233	nonsense_mediated_decay		2	1	31689611	815
ENSMUSG00000098230	antisense	1700095B10Rik	ENSMUST00000182349	antisense		5	1	112793309	978
ENSMUSG00000025383	protein_coding	Il23a	ENSMUST00000218109	retained_intron		10	-1	128298752	1724
ENSMUSG00000012640	protein_coding	Zfp715	ENSMUST00000151659	retained_intron		7	-1	43313294	673
ENSMUSG00000098230	antisense	1700095B10Rik	ENSMUST00000189887	antisense		5	1	112793332	711
ENSMUSG00000012640	protein_coding	Zfp715	ENSMUST00000135130	protein_coding		7	-1	43313063	418
ENSMUSG00000047592	protein_coding	Nxpe5	ENSMUST00000161047	protein_coding	alternative2	5	1	138225904	2379
ENSMUSG00000047592	protein_coding	Nxpe5	ENSMUST00000159798	protein_coding	principal2	5	1	138229822	2568
ENSMUSG00000084805	lincRNA	Gm12273	ENSMUST00000137418	lincRNA		11	1	61950915	1084
ENSMUSG00000014551	protein_coding	Mrps25	ENSMUST00000140438	protein_coding	principal1	6	-1	92184033	6073
ENSMUSG00000027698	protein_coding	Nceh1	ENSMUST00000046515	protein_coding	principal1	3	1	27182965	4480
ENSMUSG00000047592	protein_coding	Nxpe5	ENSMUST00000159964	protein_coding	alternative2	5	1	138229822	3585
ENSMUSG00000026842	protein_coding	Abl1	ENSMUST00000028190	protein_coding	principal3	2	1	31759943	5794
ENSMUSG00000027404	protein_coding	Snrpb	ENSMUST00000139225	retained_intron		2	-1	130179303	1711
ENSMUSG00000028957	protein_coding	Per3	ENSMUST00000103204	protein_coding	principal1	4	-1	151044665	5999
ENSMUSG00000097493	processed_transcript	9930014A18Rik	ENSMUST00000180730	antisense		15	1	60822271	3074
ENSMUSG00000014551	protein_coding	Mrps25	ENSMUST00000014695	retained_intron		6	-1	92175902	565
ENSMUSG00000047592	protein_coding	Nxpe5	ENSMUST00000110929	protein_coding	principal2	5	1	138225904	2312
ENSMUSG00000097493	processed_transcript	9930014A18Rik	ENSMUST00000192865	TEC		15	1	60822953	2657
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000052119	protein_coding	alternative1	2	-1	32431119	3529
ENSMUSG00000014551	protein_coding	Mrps25	ENSMUST00000134132	retained_intron		6	-1	92183971	636
ENSMUSG00000097493	processed_transcript	9930014A18Rik	ENSMUST00000186605	antisense		15	1	60823402	486
ENSMUSG00000026842	protein_coding	Abl1	ENSMUST00000124089	protein_coding		2	1	31760173	561
ENSMUSG00000027698	protein_coding	Nceh1	ENSMUST00000138947	nonsense_mediated_decay		3	1	27183004	339
ENSMUSG00000108199	TEC	Gm44249	ENSMUST00000204538	TEC		6	-1	92146293	1805
ENSMUSG00000026842	protein_coding	Abl1	ENSMUST00000127714	retained_intron		2	1	31790171	577
ENSMUSG00000010476	protein_coding	Ebf3	ENSMUST00000106118	protein_coding	alternative1	7	-1	137314414	3736
ENSMUSG00000026842	protein_coding	Abl1	ENSMUST00000124726	retained_intron		2	1	31796646	847
ENSMUSG00000027698	protein_coding	Nceh1	ENSMUST00000129412	retained_intron		3	1	27183004	669
ENSMUSG00000097493	processed_transcript	9930014A18Rik	ENSMUST00000181910	antisense		15	1	60824341	4116
ENSMUSG00000027698	protein_coding	Nceh1	ENSMUST00000091284	protein_coding		3	1	27183004	830
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000028160	protein_coding	principal3	2	-1	32451422	3294
ENSMUSG00000056832	protein_coding	Ttc26	ENSMUST00000162554	protein_coding	principal1	6	1	38381469	4195
ENSMUSG00000028957	protein_coding	Per3	ENSMUST00000138052	processed_transcript		4	-1	151016145	3663
ENSMUSG00000027698	protein_coding	Nceh1	ENSMUST00000140872	processed_transcript		3	1	27188441	577
ENSMUSG00000087549	antisense	Gm13427	ENSMUST00000154296	antisense		2	-1	31688469	794
ENSMUSG00000118600	protein_coding	AL929275.1	ENSMUST00000239231	protein_coding	principal1	2	1	31689118	99
ENSMUSG00000102186	processed_pseudogene	Gm37191	ENSMUST00000193346	processed_pseudogene		3	1	27278060	388
ENSMUSG00000000278	protein_coding	Scpep1	ENSMUST00000000287	protein_coding	principal1	11	-1	88955465	2097
ENSMUSG00000004044	protein_coding	Cavin1	ENSMUST00000060792	protein_coding	principal1	11	-1	100970887	3491
ENSMUSG00000056832	protein_coding	Ttc26	ENSMUST00000161751	protein_coding		6	1	38381525	696
ENSMUSG00000072568	protein_coding	Lratd2	ENSMUST00000100635	protein_coding	principal1	15	-1	60825080	5565
ENSMUSG00000004044	protein_coding	Cavin1	ENSMUST00000132934	processed_transcript		11	-1	100970551	658
ENSMUSG00000010476	protein_coding	Ebf3	ENSMUST00000210774	protein_coding	alternative1	7	-1	137313986	2994
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000113310	protein_coding	alternative1	2	-1	32451445	3278
ENSMUSG00000097509	antisense	B230322F03Rik	ENSMUST00000181932	antisense		7	1	35555367	1569
ENSMUSG00000102501	TEC	Gm37372	ENSMUST00000193577	TEC		1	-1	106075894	3311
ENSMUSG00000020133	protein_coding	2310011J03Rik	ENSMUST00000020341	protein_coding	principal1	10	-1	80320537	1649
ENSMUSG00000097612	processed_pseudogene	Gm26509	ENSMUST00000180947	processed_pseudogene		1	1	106090068	948
ENSMUSG00000072568	protein_coding	Lratd2	ENSMUST00000186536	processed_transcript		15	-1	60853778	410
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000113308	protein_coding	alternative1	2	-1	32430752	2643
ENSMUSG00000010476	protein_coding	Ebf3	ENSMUST00000209578	protein_coding		7	-1	137267538	1863
ENSMUSG00000010476	protein_coding	Ebf3	ENSMUST00000209905	retained_intron		7	-1	137226802	4008
ENSMUSG00000101583	lincRNA	Gm20753	ENSMUST00000190105	lincRNA		1	-1	106171524	545
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000113307	protein_coding	alternative1	2	-1	32424005	2541
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000153782	retained_intron		2	-1	32416571	277
ENSMUSG00000056832	protein_coding	Ttc26	ENSMUST00000159145	nonsense_mediated_decay		6	1	38381525	4241
ENSMUSG00000028957	protein_coding	Per3	ENSMUST00000138584	retained_intron		4	-1	151031497	4909
ENSMUSG00000028957	protein_coding	Per3	ENSMUST00000136398	nonsense_mediated_decay		4	-1	151044665	4253
ENSMUSG00000010476	protein_coding	Ebf3	ENSMUST00000209864	processed_transcript		7	-1	137313916	739
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000128611	retained_intron		2	-1	32420450	734
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000143092	retained_intron		2	-1	32417830	573
ENSMUSG00000000561	protein_coding	Wdr77	ENSMUST00000010278	protein_coding	principal1	3	1	105959369	3682
ENSMUSG00000026725	protein_coding	Tnn	ENSMUST00000039178	protein_coding	principal1	1	-1	160153580	5817
ENSMUSG00000042207	protein_coding	Kdm5b	ENSMUST00000047714	protein_coding	principal1	1	1	134560171	8714
ENSMUSG00000010476	protein_coding	Ebf3	ENSMUST00000168203	protein_coding	alternative1	7	-1	137314414	3724
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000136361	protein_coding		2	-1	32431105	789
ENSMUSG00000056832	protein_coding	Ttc26	ENSMUST00000160215	nonsense_mediated_decay		6	1	38381529	706
ENSMUSG00000052928	protein_coding	Ctif	ENSMUST00000165559	protein_coding	principal1	18	-1	75697554	6031
ENSMUSG00000028957	protein_coding	Per3	ENSMUST00000128283	retained_intron		4	-1	151044665	2139
ENSMUSG00000026725	protein_coding	Tnn	ENSMUST00000131919	protein_coding		1	-1	160147888	3987
ENSMUSG00000056832	protein_coding	Ttc26	ENSMUST00000162486	retained_intron		6	1	38391507	517
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000153886	protein_coding		2	-1	32421980	682
ENSMUSG00000079084	protein_coding	Ccdc82	ENSMUST00000169961	retained_intron		9	1	13246955	2369
ENSMUSG00000034875	protein_coding	Nudt19	ENSMUST00000040962	protein_coding	principal1	7	-1	35556304	2298
ENSMUSG00000089905	processed_pseudogene	Gm16563	ENSMUST00000162673	processed_pseudogene		6	1	38396267	423
ENSMUSG00000042207	protein_coding	Kdm5b	ENSMUST00000112198	protein_coding		1	1	134560192	5413
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000127961	protein_coding		2	-1	32431104	553
ENSMUSG00000010476	protein_coding	Ebf3	ENSMUST00000169486	protein_coding	alternative1	7	-1	137314445	4994
ENSMUSG00000079297	processed_pseudogene	Gm2223	ENSMUST00000112099	processed_pseudogene		X	1	33505661	1350
ENSMUSG00000052928	protein_coding	Ctif	ENSMUST00000235147	retained_intron		18	-1	75637273	540
ENSMUSG00000026819	protein_coding	Slc25a25	ENSMUST00000194756	retained_intron		2	-1	32431169	3821
ENSMUSG00000078491	protein_coding	Gm13090	ENSMUST00000105667	protein_coding	principal1	4	1	151089570	746
ENSMUSG00000109847	antisense	Gm45278	ENSMUST00000209650	antisense		7	1	137198488	2414
ENSMUSG00000102731	processed_pseudogene	Gm38261	ENSMUST00000192608	processed_pseudogene		3	1	49603561	316
ENSMUSG00000097712	antisense	Gm10532	ENSMUST00000181913	antisense		18	1	75514645	2301
ENSMUSG00000034875	protein_coding	Nudt19	ENSMUST00000142930	processed_transcript		7	-1	35555194	733
ENSMUSG00000108300	processed_pseudogene	Gm44539	ENSMUST00000206010	processed_pseudogene		7	1	43344550	238
ENSMUSG00000103249	processed_pseudogene	Gm38088	ENSMUST00000195829	processed_pseudogene		3	1	49604227	241
ENSMUSG00000034875	protein_coding	Nudt19	ENSMUST00000123469	retained_intron		7	-1	35552043	738
ENSMUSG00000042207	protein_coding	Kdm5b	ENSMUST00000112197	retained_intron		1	1	134560207	2740
ENSMUSG00000104134	processed_pseudogene	Gm2328	ENSMUST00000193525	processed_pseudogene		3	-1	49632969	535
ENSMUSG00000042207	protein_coding	Kdm5b	ENSMUST00000186128	retained_intron		1	1	134587977	2710
ENSMUSG00000103568	processed_pseudogene	Gm29741	ENSMUST00000192667	processed_pseudogene		3	1	49643707	421
ENSMUSG00000039164	protein_coding	Naif1	ENSMUST00000048431	protein_coding	principal1	2	1	32450457	4650
ENSMUSG00000035711	protein_coding	Dok3	ENSMUST00000223944	retained_intron		13	-1	55528554	2377
ENSMUSG00000042207	protein_coding	Kdm5b	ENSMUST00000133725	retained_intron		1	1	134621880	605
ENSMUSG00000042207	protein_coding	Kdm5b	ENSMUST00000191572	retained_intron		1	1	134622800	4402
ENSMUSG00000053113	protein_coding	Socs3	ENSMUST00000054002	protein_coding	principal1	11	-1	117969186	2552
ENSMUSG00000053113	protein_coding	Socs3	ENSMUST00000123255	processed_transcript		11	-1	117970047	490
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000002413	protein_coding	principal1	8	1	70172405	3018
ENSMUSG00000053113	protein_coding	Socs3	ENSMUST00000132295	processed_transcript		11	-1	117969451	246
ENSMUSG00000087007	processed_pseudogene	Gm2231	ENSMUST00000125661	processed_pseudogene		X	1	33531428	612
ENSMUSG00000048271	protein_coding	Rbm33	ENSMUST00000114884	protein_coding	alternative2	5	1	28317177	6256
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000141429	protein_coding	principal2	12	-1	91384409	4807
ENSMUSG00000027404	protein_coding	Snrpb	ENSMUST00000103199	protein_coding	principal1	2	-1	130179403	1161
ENSMUSG00000101294	protein_coding	Btbd35f15	ENSMUST00000186329	protein_coding	principal1	X	-1	33577314	1917
ENSMUSG00000095788	protein_coding	Sirpb1a	ENSMUST00000099201	protein_coding	alternative2	3	-1	15426422	1419
ENSMUSG00000079084	protein_coding	Ccdc82	ENSMUST00000217444	protein_coding	principal1	9	1	13246968	4736
ENSMUSG00000086668	processed_pseudogene	Gm15273	ENSMUST00000142302	processed_pseudogene		X	-1	33581074	868
ENSMUSG00000079084	protein_coding	Ccdc82	ENSMUST00000110583	protein_coding	principal1	9	1	13246979	4642
ENSMUSG00000000561	protein_coding	Wdr77	ENSMUST00000127464	retained_intron		3	1	105959508	1095
ENSMUSG00000086525	processed_pseudogene	Gm15281	ENSMUST00000125181	processed_pseudogene		X	1	33625925	351
ENSMUSG00000085756	processed_pseudogene	Gm15279	ENSMUST00000155593	processed_pseudogene		X	-1	33627851	288
ENSMUSG00000035711	protein_coding	Dok3	ENSMUST00000223563	protein_coding	principal1	13	-1	55529296	1644
ENSMUSG00000000561	protein_coding	Wdr77	ENSMUST00000130994	nonsense_mediated_decay		3	1	105959514	4286
ENSMUSG00000079084	protein_coding	Ccdc82	ENSMUST00000215735	retained_intron		9	1	13246982	2723
ENSMUSG00000087468	processed_pseudogene	Gm7023	ENSMUST00000147295	processed_pseudogene		X	1	33653403	868
ENSMUSG00000027404	protein_coding	Snrpb	ENSMUST00000147570	nonsense_mediated_decay		2	-1	130179403	1133
ENSMUSG00000048271	protein_coding	Rbm33	ENSMUST00000059644	protein_coding	principal2	5	1	28317177	9510
ENSMUSG00000095788	protein_coding	Sirpb1a	ENSMUST00000192700	protein_coding	principal2	3	-1	15426520	1499
ENSMUSG00000079084	protein_coding	Ccdc82	ENSMUST00000216578	protein_coding		9	1	13250735	1835
ENSMUSG00000035711	protein_coding	Dok3	ENSMUST00000047877	protein_coding	principal1	13	-1	55528538	1546
ENSMUSG00000095934	protein_coding	Btbd35f13	ENSMUST00000177912	protein_coding	principal1	X	1	33657172	1701
ENSMUSG00000027206	protein_coding	Cops2	ENSMUST00000110463	protein_coding	alternative1	2	-1	125859139	3392
ENSMUSG00000027404	protein_coding	Snrpb	ENSMUST00000150835	retained_intron		2	-1	130179334	416
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000182980	protein_coding		8	1	70172408	2080
ENSMUSG00000000561	protein_coding	Wdr77	ENSMUST00000128005	protein_coding		3	1	105961622	911
ENSMUSG00000079084	protein_coding	Ccdc82	ENSMUST00000215778	processed_transcript		9	1	13272331	2357
ENSMUSG00000048271	protein_coding	Rbm33	ENSMUST00000030920	protein_coding		5	1	28317202	3955
ENSMUSG00000095788	protein_coding	Sirpb1a	ENSMUST00000191958	retained_intron		3	-1	15426483	1933
ENSMUSG00000000561	protein_coding	Wdr77	ENSMUST00000151263	retained_intron		3	1	105964449	590
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000147656	nonsense_mediated_decay		8	1	70172413	2109
ENSMUSG00000095788	protein_coding	Sirpb1a	ENSMUST00000194144	protein_coding		3	-1	15426446	588
ENSMUSG00000048271	protein_coding	Rbm33	ENSMUST00000144967	protein_coding		5	1	28394055	1211
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000126048	processed_transcript		12	-1	91063411	775
ENSMUSG00000048271	protein_coding	Rbm33	ENSMUST00000133313	protein_coding		5	1	28410661	547
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000133339	retained_intron		8	1	70172416	440
ENSMUSG00000085743	processed_transcript	8430419K02Rik	ENSMUST00000128654	lincRNA		11	-1	18872155	1870
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000123400	processed_transcript		12	-1	91030078	711
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000154836	processed_transcript		12	-1	91030078	647
ENSMUSG00000085743	processed_transcript	8430419K02Rik	ENSMUST00000156831	processed_transcript		11	-1	18860115	633
ENSMUSG00000055413	polymorphic_pseudogene	H2-Q5	ENSMUST00000174854	retained_intron		17	1	35394126	1156
ENSMUSG00000085743	processed_transcript	8430419K02Rik	ENSMUST00000133948	processed_transcript		11	-1	18874309	613
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000123923	processed_transcript		8	1	70172416	436
ENSMUSG00000027206	protein_coding	Cops2	ENSMUST00000028635	protein_coding	principal3	2	-1	125859139	2073
ENSMUSG00000069258	protein_coding	Prl2b1	ENSMUST00000102954	protein_coding	principal2	13	-1	27390846	870
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000123161	processed_transcript		12	-1	91183719	520
ENSMUSG00000099874	antisense	Gm29629	ENSMUST00000187926	antisense		1	1	132139504	386
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000182365	protein_coding		8	1	70172419	399
ENSMUSG00000109069	processed_pseudogene	Gm2734	ENSMUST00000208561	processed_pseudogene		8	-1	5994723	743
ENSMUSG00000029404	protein_coding	Arl6ip4	ENSMUST00000149835	protein_coding		5	1	124116089	462
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000133329	processed_transcript		12	-1	91183772	336
ENSMUSG00000082593	unprocessed_pseudogene	Gm11331	ENSMUST00000119764	unprocessed_pseudogene		13	1	23266534	288
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000149105	protein_coding		8	1	70174303	2093
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000140674	protein_coding	alternative2	12	-1	91260048	361
ENSMUSG00000027206	protein_coding	Cops2	ENSMUST00000110462	protein_coding		2	-1	125859039	1853
ENSMUSG00000069258	protein_coding	Prl2b1	ENSMUST00000091678	protein_coding	alternative2	13	-1	27390846	891
ENSMUSG00000109518	TEC	Gm44843	ENSMUST00000208320	TEC		8	1	6034867	1396
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000126268	retained_intron		8	1	70176845	402
ENSMUSG00000055413	polymorphic_pseudogene	H2-Q5	ENSMUST00000172979	polymorphic_pseudogene	principal1	17	1	35394126	998
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000182942	processed_transcript		8	1	70177240	123
ENSMUSG00000084096	unprocessed_pseudogene	Vmn1r-ps135	ENSMUST00000120909	unprocessed_pseudogene		13	1	23268880	595
ENSMUSG00000046378	protein_coding	Asphd1	ENSMUST00000106340	protein_coding	alternative2	7	-1	126949159	1647
ENSMUSG00000027206	protein_coding	Cops2	ENSMUST00000139343	processed_transcript		2	-1	125858996	417
ENSMUSG00000061313	protein_coding	Ddhd2	ENSMUST00000033975	protein_coding	principal1	8	-1	25754280	4245
ENSMUSG00000109534	TEC	Gm44842	ENSMUST00000209173	TEC		8	1	6218668	3372
ENSMUSG00000027206	protein_coding	Cops2	ENSMUST00000152683	processed_transcript		2	-1	125859063	355
ENSMUSG00000046378	protein_coding	Asphd1	ENSMUST00000052937	protein_coding	principal3	7	-1	126949582	730
ENSMUSG00000028518	protein_coding	Prkaa2	ENSMUST00000030243	protein_coding	principal1	4	-1	105109890	7969
ENSMUSG00000055413	polymorphic_pseudogene	H2-Q5	ENSMUST00000116010	processed_transcript		17	1	35397330	172
ENSMUSG00000061313	protein_coding	Ddhd2	ENSMUST00000210777	protein_coding		8	-1	25734727	734
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000107245	protein_coding		4	-1	82505770	9116
ENSMUSG00000080698	processed_pseudogene	Gm11333	ENSMUST00000119479	processed_pseudogene		13	1	23298049	148
ENSMUSG00000105865	processed_pseudogene	Gm34144	ENSMUST00000197039	processed_pseudogene		5	1	72572174	259
ENSMUSG00000061313	protein_coding	Ddhd2	ENSMUST00000211688	protein_coding		8	-1	25754596	2265
ENSMUSG00000085488	lincRNA	4930557F10Rik	ENSMUST00000155432	lincRNA		13	-1	23313400	630
ENSMUSG00000046378	protein_coding	Asphd1	ENSMUST00000106339	protein_coding	principal3	7	-1	126949581	518
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000125906	nonsense_mediated_decay		8	1	70177490	658
ENSMUSG00000027835	protein_coding	Pdcd10	ENSMUST00000161137	protein_coding	principal1	3	-1	75556856	1927
ENSMUSG00000085122	lincRNA	4933404K08Rik	ENSMUST00000156977	lincRNA		13	1	23278350	1434
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000133084	retained_intron		8	1	70178733	770
ENSMUSG00000061313	protein_coding	Ddhd2	ENSMUST00000211009	nonsense_mediated_decay		8	-1	25754413	2508
ENSMUSG00000002342	protein_coding	Tmem161a	ENSMUST00000143543	retained_intron		8	1	70180539	827
ENSMUSG00000027835	protein_coding	Pdcd10	ENSMUST00000159519	retained_intron		3	-1	75521030	655
ENSMUSG00000063689	protein_coding	H2ac21	ENSMUST00000073115	protein_coding	principal1	3	1	96219865	444
ENSMUSG00000061313	protein_coding	Ddhd2	ENSMUST00000211751	protein_coding		8	-1	25749850	450
ENSMUSG00000095334	processed_transcript	Gm21984	ENSMUST00000123117	processed_transcript		7	1	126942144	822
ENSMUSG00000061313	protein_coding	Ddhd2	ENSMUST00000210888	protein_coding		8	-1	25753175	339
ENSMUSG00000005893	protein_coding	Nr2c2	ENSMUST00000113460	protein_coding	principal3	6	1	92091390	7647
ENSMUSG00000061313	protein_coding	Ddhd2	ENSMUST00000209419	retained_intron		8	-1	25754283	1835
ENSMUSG00000086556	antisense	Gm15444	ENSMUST00000148335	antisense		3	-1	96220168	388
ENSMUSG00000047085	protein_coding	Lrrc4b	ENSMUST00000127790	protein_coding		7	1	44429018	790
ENSMUSG00000027835	protein_coding	Pdcd10	ENSMUST00000029424	protein_coding		3	-1	75556811	907
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000127802	retained_intron		12	-1	91384409	1750
ENSMUSG00000115752	antisense	1700010G06Rik	ENSMUST00000226773	antisense		15	1	64314497	683
ENSMUSG00000027835	protein_coding	Pdcd10	ENSMUST00000160196	retained_intron		3	-1	75521570	697
ENSMUSG00000005893	protein_coding	Nr2c2	ENSMUST00000113463	protein_coding	alternative1	6	1	92092433	2368
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000145094	processed_transcript		12	-1	91339081	3117
ENSMUSG00000091055	protein_coding	Siglec15	ENSMUST00000170760	protein_coding	principal1	18	-1	78057395	1156
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000127866	retained_intron		12	-1	91384359	1806
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000129111	processed_transcript		12	-1	91384409	4512
ENSMUSG00000027835	protein_coding	Pdcd10	ENSMUST00000162138	protein_coding		3	-1	75556759	509
ENSMUSG00000005893	protein_coding	Nr2c2	ENSMUST00000133133	protein_coding		6	1	92138015	1065
ENSMUSG00000061533	protein_coding	Cep128	ENSMUST00000138935	retained_intron		12	-1	91384353	2106
ENSMUSG00000047085	protein_coding	Lrrc4b	ENSMUST00000058667	protein_coding	principal1	7	1	44442485	2728
ENSMUSG00000027835	protein_coding	Pdcd10	ENSMUST00000159217	retained_intron		3	-1	75556837	545
ENSMUSG00000030811	protein_coding	Fbxl19	ENSMUST00000186207	protein_coding	principal2	7	1	127745201	3178
ENSMUSG00000113239	processed_pseudogene	Gm18388	ENSMUST00000222339	processed_pseudogene		12	1	91323669	557
ENSMUSG00000005893	protein_coding	Nr2c2	ENSMUST00000204661	retained_intron		6	1	92138616	3618
ENSMUSG00000093695	antisense	Gm20717	ENSMUST00000176762	antisense		15	1	64098317	657
ENSMUSG00000093695	antisense	Gm20717	ENSMUST00000228817	antisense		15	1	64098317	623
ENSMUSG00000034667	protein_coding	Xpot	ENSMUST00000218004	protein_coding	principal1	10	-1	121626332	6005
ENSMUSG00000030811	protein_coding	Fbxl19	ENSMUST00000189562	protein_coding		7	1	127745770	307
ENSMUSG00000108679	unprocessed_pseudogene	Gm45134	ENSMUST00000206046	unprocessed_pseudogene		7	-1	44214718	1189
ENSMUSG00000005893	protein_coding	Nr2c2	ENSMUST00000146175	nonsense_mediated_decay		6	1	92139796	2811
ENSMUSG00000113273	lincRNA	Gm48423	ENSMUST00000222807	lincRNA		13	1	67981215	2884
ENSMUSG00000034667	protein_coding	Xpot	ENSMUST00000219334	protein_coding		10	-1	121600813	729
ENSMUSG00000113365	unprocessed_pseudogene	Gm48424	ENSMUST00000222859	unprocessed_pseudogene		13	-1	68060608	153
ENSMUSG00000047085	protein_coding	Lrrc4b	ENSMUST00000156093	protein_coding		7	1	44442737	839
ENSMUSG00000005893	protein_coding	Nr2c2	ENSMUST00000133321	processed_transcript		6	1	92145727	487
ENSMUSG00000034667	protein_coding	Xpot	ENSMUST00000218973	retained_intron		10	-1	121604598	658
ENSMUSG00000005893	protein_coding	Nr2c2	ENSMUST00000204497	retained_intron		6	1	92156981	1847
ENSMUSG00000033720	protein_coding	Sfxn5	ENSMUST00000045846	protein_coding	principal2	6	-1	85333422	3656
ENSMUSG00000030685	protein_coding	Kctd13	ENSMUST00000032924	protein_coding	principal1	7	1	126928879	1676
ENSMUSG00000100808	processed_pseudogene	Gm28594	ENSMUST00000187022	processed_pseudogene		1	-1	24911659	661
ENSMUSG00000041997	protein_coding	Tlk1	ENSMUST00000038584	protein_coding	principal1	2	-1	70825728	4280
ENSMUSG00000005893	protein_coding	Nr2c2	ENSMUST00000204349	processed_transcript		6	1	92164177	1174
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000107248	protein_coding	alternative1	4	-1	82505707	3294
ENSMUSG00000034667	protein_coding	Xpot	ENSMUST00000217865	protein_coding		10	-1	121613593	618
ENSMUSG00000015943	protein_coding	Bola1	ENSMUST00000107099	protein_coding	principal1	3	-1	96198489	995
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000107247	protein_coding	alternative1	4	-1	82505707	3267
ENSMUSG00000063935	protein_coding	Zar1	ENSMUST00000200883	retained_intron		5	-1	72579299	2494
ENSMUSG00000100483	lincRNA	Gm28237	ENSMUST00000186563	lincRNA		1	-1	24964976	641
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000163370	protein_coding	principal1	16	-1	89974699	7255
ENSMUSG00000100483	lincRNA	Gm28237	ENSMUST00000189477	lincRNA		1	-1	24965158	748
ENSMUSG00000020135	protein_coding	Apc2	ENSMUST00000105359	protein_coding	alternative2	10	1	80295977	9173
ENSMUSG00000030685	protein_coding	Kctd13	ENSMUST00000141369	retained_intron		7	1	126929921	920
ENSMUSG00000015943	protein_coding	Bola1	ENSMUST00000177442	protein_coding	principal1	3	-1	96219709	692
ENSMUSG00000113342	TEC	AA414992	ENSMUST00000221571	TEC		13	1	68181294	1576
ENSMUSG00000030685	protein_coding	Kctd13	ENSMUST00000139233	retained_intron		7	1	126942048	378
ENSMUSG00000033720	protein_coding	Sfxn5	ENSMUST00000134392	processed_transcript		6	-1	85264933	598
ENSMUSG00000030811	protein_coding	Fbxl19	ENSMUST00000186116	protein_coding		7	1	127745786	3641
ENSMUSG00000100450	processed_pseudogene	Gm9443	ENSMUST00000188406	processed_pseudogene		1	1	25011941	816
ENSMUSG00000108543	TEC	Gm44735	ENSMUST00000206197	TEC		7	1	126938886	1752
ENSMUSG00000034667	protein_coding	Xpot	ENSMUST00000039810	protein_coding		10	-1	121626316	5992
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000114124	protein_coding		16	-1	90143769	5203
ENSMUSG00000015943	protein_coding	Bola1	ENSMUST00000016087	protein_coding	principal1	3	-1	96197586	729
ENSMUSG00000033720	protein_coding	Sfxn5	ENSMUST00000059034	protein_coding	alternative2	6	-1	85333419	1081
ENSMUSG00000099392	lincRNA	Gm29414	ENSMUST00000185379	lincRNA		1	-1	25027232	448
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000140874	retained_intron		4	-1	82505310	3308
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000122918	retained_intron		4	-1	82505310	2699
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000107246	protein_coding		4	-1	82505770	3075
ENSMUSG00000078324	protein_coding	Btbd35f14	ENSMUST00000105117	protein_coding	principal1	X	-1	33702349	1701
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000002588	protein_coding	principal1	16	-1	89960827	7289
ENSMUSG00000030811	protein_coding	Fbxl19	ENSMUST00000033081	protein_coding	principal2	7	1	127746775	3410
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000135024	retained_intron		4	-1	82505779	3835
ENSMUSG00000037316	protein_coding	Bag4	ENSMUST00000038498	protein_coding	principal1	8	-1	25785287	4876
ENSMUSG00000020135	protein_coding	Apc2	ENSMUST00000154212	protein_coding		10	1	80299091	486
ENSMUSG00000096915	protein_coding	Btbd35f6	ENSMUST00000179466	protein_coding	principal1	X	-1	33956540	1497
ENSMUSG00000013662	protein_coding	Atad1	ENSMUST00000235412	protein_coding	principal1	19	-1	32712331	3771
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000152588	processed_transcript		4	-1	82499316	379
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000144691	protein_coding		16	-1	89798041	321
ENSMUSG00000020135	protein_coding	Apc2	ENSMUST00000140658	retained_intron		10	1	80300847	2351
ENSMUSG00000037316	protein_coding	Bag4	ENSMUST00000210103	retained_intron		8	-1	25777582	441
ENSMUSG00000066512	protein_coding	Klk1b5	ENSMUST00000074359	protein_coding	principal1	7	1	44215945	1391
ENSMUSG00000013662	protein_coding	Atad1	ENSMUST00000238016	processed_transcript		19	-1	32694870	1905
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000155821	protein_coding		4	-1	82705750	685
ENSMUSG00000013662	protein_coding	Atad1	ENSMUST00000236985	protein_coding	principal1	19	-1	32739751	2722
ENSMUSG00000030811	protein_coding	Fbxl19	ENSMUST00000188580	protein_coding		7	1	127748147	2601
ENSMUSG00000033720	protein_coding	Sfxn5	ENSMUST00000148179	retained_intron		6	-1	85333406	849
ENSMUSG00000118488	transcribed_processed_pseudogene	Gm21870	ENSMUST00000238244	processed_transcript		X	-1	33987002	622
ENSMUSG00000063935	protein_coding	Zar1	ENSMUST00000073528	protein_coding	principal1	5	-1	72581254	1429
ENSMUSG00000118488	transcribed_processed_pseudogene	Gm21870	ENSMUST00000179028	transcribed_processed_pseudogene		X	-1	33986016	367
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000148982	retained_intron		4	-1	82505764	2281
ENSMUSG00000013662	protein_coding	Atad1	ENSMUST00000235142	protein_coding		19	-1	32739783	2535
ENSMUSG00000037316	protein_coding	Bag4	ENSMUST00000209948	retained_intron		8	-1	25785198	2506
ENSMUSG00000020135	protein_coding	Apc2	ENSMUST00000140828	protein_coding		10	1	80301034	566
ENSMUSG00000030811	protein_coding	Fbxl19	ENSMUST00000206893	protein_coding	alternative2	7	1	127748274	3449
ENSMUSG00000013662	protein_coding	Atad1	ENSMUST00000236701	nonsense_mediated_decay		19	-1	32739783	2736
ENSMUSG00000033720	protein_coding	Sfxn5	ENSMUST00000149362	processed_transcript		6	-1	85333419	504
ENSMUSG00000063935	protein_coding	Zar1	ENSMUST00000202174	protein_coding		5	-1	72580754	758
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000164263	protein_coding		16	-1	89818352	3569
ENSMUSG00000033720	protein_coding	Sfxn5	ENSMUST00000113788	protein_coding		6	-1	85333422	514
ENSMUSG00000020135	protein_coding	Apc2	ENSMUST00000138909	protein_coding		10	1	80301035	558
ENSMUSG00000013662	protein_coding	Atad1	ENSMUST00000070210	protein_coding	principal1	19	-1	32739786	2666
ENSMUSG00000029404	protein_coding	Arl6ip4	ENSMUST00000031351	protein_coding	principal2	5	1	124116099	1192
ENSMUSG00000033720	protein_coding	Sfxn5	ENSMUST00000138489	processed_transcript		6	-1	85320398	492
ENSMUSG00000113303	bidirectional_promoter_lncRNA	4930423D22Rik	ENSMUST00000221909	bidirectional_promoter_lncRNA		12	1	81781358	1674
ENSMUSG00000013662	protein_coding	Atad1	ENSMUST00000236011	protein_coding	principal1	19	-1	32739786	2943
ENSMUSG00000118429	protein_coding	Btbd35f9	ENSMUST00000238632	protein_coding	principal1	X	-1	34161564	1929
ENSMUSG00000081037	transcribed_processed_pseudogene	Gm13929	ENSMUST00000117553	transcribed_processed_pseudogene		2	1	112000180	1125
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000089084	retained_intron		16	-1	89837875	3495
ENSMUSG00000020135	protein_coding	Apc2	ENSMUST00000020349	protein_coding	principal2	10	1	80301820	9074
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000178095	processed_transcript		16	-1	89795282	1465
ENSMUSG00000013662	protein_coding	Atad1	ENSMUST00000237752	protein_coding		19	-1	32712297	2269
ENSMUSG00000033720	protein_coding	Sfxn5	ENSMUST00000113787	protein_coding		6	-1	85332750	638
ENSMUSG00000029404	protein_coding	Arl6ip4	ENSMUST00000122394	protein_coding	alternative2	5	1	124116122	982
ENSMUSG00000033720	protein_coding	Sfxn5	ENSMUST00000203035	retained_intron		6	-1	85333422	4476
ENSMUSG00000092560	processed_pseudogene	Gm8750	ENSMUST00000173278	processed_pseudogene		17	1	35400799	1537
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000134021	protein_coding		16	-1	89799990	1770
ENSMUSG00000108827	protein_coding	Olfr1310	ENSMUST00000213559	protein_coding	principal1	2	-1	112012708	4897
ENSMUSG00000118164	processed_pseudogene	Gm20570	ENSMUST00000237826	processed_pseudogene		18	1	75767143	132
ENSMUSG00000029404	protein_coding	Arl6ip4	ENSMUST00000145667	protein_coding		5	1	124116679	753
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000151655	processed_transcript		16	-1	89974699	726
ENSMUSG00000074340	protein_coding	Ovgp1	ENSMUST00000000573	protein_coding	principal1	3	1	105973711	2616
ENSMUSG00000086841	processed_transcript	2410006H16Rik	ENSMUST00000131787	processed_transcript		11	1	62602877	462
ENSMUSG00000021056	protein_coding	Tex21	ENSMUST00000021453	protein_coding	principal2	12	-1	76246743	2137
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000130951	processed_transcript		16	-1	89960737	461
ENSMUSG00000013662	protein_coding	Atad1	ENSMUST00000236546	processed_transcript		19	-1	32712320	624
ENSMUSG00000108827	protein_coding	Olfr1310	ENSMUST00000207169	protein_coding	principal1	2	-1	112009210	1009
ENSMUSG00000050552	protein_coding	Lamtor4	ENSMUST00000062067	protein_coding	principal1	5	1	138255482	877
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000139544	processed_transcript		16	-1	89918985	503
ENSMUSG00000107857	unprocessed_pseudogene	Gm19596	ENSMUST00000203685	unprocessed_pseudogene		6	1	86147152	739
ENSMUSG00000095659	protein_coding	Spin2g	ENSMUST00000203586	protein_coding	principal1	X	-1	34238733	1016
ENSMUSG00000013662	protein_coding	Atad1	ENSMUST00000237933	retained_intron		19	-1	32701593	611
ENSMUSG00000021056	protein_coding	Tex21	ENSMUST00000218426	protein_coding	alternative2	12	-1	76246746	1980
ENSMUSG00000095659	protein_coding	Spin2g	ENSMUST00000178425	protein_coding		X	-1	34237786	687
ENSMUSG00000097302	lincRNA	1700034B16Rik	ENSMUST00000180957	lincRNA		18	1	75781032	722
ENSMUSG00000074340	protein_coding	Ovgp1	ENSMUST00000163626	nonsense_mediated_decay		3	1	105974083	1213
ENSMUSG00000097650	bidirectional_promoter_lncRNA	4921507G05Rik	ENSMUST00000181348	bidirectional_promoter_lncRNA		12	1	110841029	1653
ENSMUSG00000110384	lincRNA	Gm45301	ENSMUST00000211359	lincRNA		8	-1	35409506	933
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000124433	retained_intron		16	-1	89956107	667
ENSMUSG00000029404	protein_coding	Arl6ip4	ENSMUST00000196401	protein_coding		5	1	124117311	294
ENSMUSG00000021056	protein_coding	Tex21	ENSMUST00000220068	processed_transcript		12	-1	76229464	707
ENSMUSG00000074340	protein_coding	Ovgp1	ENSMUST00000164055	retained_intron		3	1	105977291	818
ENSMUSG00000109403	protein_coding	Olfr1311	ENSMUST00000213602	protein_coding	principal1	2	-1	112024409	2631
ENSMUSG00000097832	lincRNA	Gm26912	ENSMUST00000180988	lincRNA		12	-1	110845216	1483
ENSMUSG00000110367	lincRNA	Gm34853	ENSMUST00000211662	lincRNA		8	1	35439734	509
ENSMUSG00000021056	protein_coding	Tex21	ENSMUST00000219327	protein_coding		12	-1	76246685	807
ENSMUSG00000114597	antisense	Gm47067	ENSMUST00000224614	antisense		13	1	40737568	874
ENSMUSG00000109403	protein_coding	Olfr1311	ENSMUST00000216319	processed_transcript		2	-1	112024397	2558
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000050872	protein_coding	principal2	4	-1	82505308	8770
ENSMUSG00000074340	protein_coding	Ovgp1	ENSMUST00000092878	processed_transcript		3	1	105980112	525
ENSMUSG00000109403	protein_coding	Olfr1311	ENSMUST00000215321	protein_coding	principal1	2	-1	112024412	2667
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000155915	processed_transcript		16	-1	89973899	446
ENSMUSG00000114936	antisense	Gm47061	ENSMUST00000224038	antisense		13	1	40723110	2340
ENSMUSG00000002489	protein_coding	Tiam1	ENSMUST00000136760	processed_transcript		16	-1	89980080	241
ENSMUSG00000109403	protein_coding	Olfr1311	ENSMUST00000208536	protein_coding	principal1	2	-1	112021856	943
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000126388	protein_coding	principal1	11	1	70212752	1938
ENSMUSG00000050552	protein_coding	Lamtor4	ENSMUST00000160157	processed_transcript		5	1	138255831	980
ENSMUSG00000117797	antisense	2900057B20Rik	ENSMUST00000236092	antisense		18	-1	76098471	1016
ENSMUSG00000097752	antisense	Gm26688	ENSMUST00000181176	antisense		13	1	40727808	1568
ENSMUSG00000097603	processed_transcript	A430010J10Rik	ENSMUST00000181304	lincRNA		6	1	67115673	2041
ENSMUSG00000008575	protein_coding	Nfib	ENSMUST00000064770	protein_coding		4	-1	82505308	8429
ENSMUSG00000100484	unprocessed_pseudogene	Gm7133	ENSMUST00000187797	unprocessed_pseudogene		1	1	97162860	2039
ENSMUSG00000118311	antisense	1700003O11Rik	ENSMUST00000238127	antisense		18	-1	76015677	582
ENSMUSG00000056043	protein_coding	Rgs9bp	ENSMUST00000069912	protein_coding	principal1	7	-1	35585582	6590
ENSMUSG00000026437	protein_coding	Cdk18	ENSMUST00000027697	protein_coding	principal1	1	-1	132139684	4355
ENSMUSG00000097603	processed_transcript	A430010J10Rik	ENSMUST00000204608	retained_intron		6	1	67115677	623
ENSMUSG00000097603	processed_transcript	A430010J10Rik	ENSMUST00000203974	retained_intron		6	1	67164924	3187
ENSMUSG00000097603	processed_transcript	A430010J10Rik	ENSMUST00000054470	pseudogene		6	1	67165203	408
ENSMUSG00000074947	protein_coding	Olfr1312	ENSMUST00000213961	protein_coding	principal1	2	-1	112050236	5345
ENSMUSG00000028517	protein_coding	Plpp3	ENSMUST00000064139	protein_coding	principal1	4	1	105157347	3159
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000144494	retained_intron		11	1	70213999	755
ENSMUSG00000074947	protein_coding	Olfr1312	ENSMUST00000213582	protein_coding	principal1	2	-1	112050186	2891
ENSMUSG00000024421	protein_coding	Lama3	ENSMUST00000092070	protein_coding	principal1	18	1	12333819	10548
ENSMUSG00000074947	protein_coding	Olfr1312	ENSMUST00000215531	protein_coding	principal1	2	-1	112050238	2975
ENSMUSG00000113950	lincRNA	Gm47080	ENSMUST00000221799	lincRNA		12	1	81827799	646
ENSMUSG00000074947	protein_coding	Olfr1312	ENSMUST00000099600	protein_coding	principal1	2	-1	112043030	954
ENSMUSG00000114654	lincRNA	Gm47918	ENSMUST00000225848	lincRNA		13	1	58443021	607
ENSMUSG00000024421	protein_coding	Lama3	ENSMUST00000188815	protein_coding		18	1	12504199	5551
ENSMUSG00000081819	processed_pseudogene	Gm12722	ENSMUST00000118507	processed_pseudogene		4	-1	105374946	493
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000123716	nonsense_mediated_decay		11	1	70214080	1633
ENSMUSG00000103175	TEC	Gm37169	ENSMUST00000195599	TEC		2	1	32487988	4161
ENSMUSG00000101406	antisense	Gm29200	ENSMUST00000188118	antisense		18	-1	12504426	1085
ENSMUSG00000100090	processed_pseudogene	Gm29199	ENSMUST00000187766	processed_pseudogene		18	-1	12499462	775
ENSMUSG00000026437	protein_coding	Cdk18	ENSMUST00000188387	retained_intron		1	-1	132116913	839
ENSMUSG00000044646	protein_coding	Zbtb7c	ENSMUST00000058997	protein_coding	principal1	18	1	75820178	4572
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000094055	protein_coding	principal1	11	1	70214115	1788
ENSMUSG00000029627	protein_coding	Zkscan14	ENSMUST00000031632	protein_coding	principal1	5	-1	145201868	1967
ENSMUSG00000028756	protein_coding	Pink1	ENSMUST00000105816	protein_coding		4	-1	138316426	1465
ENSMUSG00000044646	protein_coding	Zbtb7c	ENSMUST00000236462	nonsense_mediated_decay		18	1	75820215	3571
ENSMUSG00000112274	bidirectional_promoter_lncRNA	Gm47525	ENSMUST00000220205	bidirectional_promoter_lncRNA		12	-1	76255334	773
ENSMUSG00000029627	protein_coding	Zkscan14	ENSMUST00000162220	protein_coding		5	-1	145201857	816
ENSMUSG00000060204	protein_coding	Slc10a4l	ENSMUST00000239243	processed_transcript		5	-1	72587551	1382
ENSMUSG00000060204	protein_coding	Slc10a4l	ENSMUST00000239348	unprocessed_pseudogene		5	-1	72587387	1292
ENSMUSG00000029627	protein_coding	Zkscan14	ENSMUST00000198959	protein_coding		5	-1	145201868	2243
ENSMUSG00000044646	protein_coding	Zbtb7c	ENSMUST00000167921	protein_coding	principal1	18	1	76059458	2147
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000126296	protein_coding		11	1	70214119	742
ENSMUSG00000085863	lincRNA	Gm12801	ENSMUST00000153228	lincRNA		4	1	101284221	263
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000136328	protein_coding		11	1	70214119	1403
ENSMUSG00000060204	protein_coding	Slc10a4l	ENSMUST00000031124	protein_coding	principal1	5	-1	72587550	1380
ENSMUSG00000085721	lincRNA	Gm12796	ENSMUST00000131864	lincRNA		4	-1	101321745	344
ENSMUSG00000118294	processed_pseudogene	Gm9028	ENSMUST00000237277	processed_pseudogene		18	-1	76224183	214
ENSMUSG00000083128	processed_pseudogene	Gm12723	ENSMUST00000120700	processed_pseudogene		4	1	105511232	451
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000153993	protein_coding		11	1	70214121	388
ENSMUSG00000094606	protein_coding	Vmn2r50	ENSMUST00000074943	protein_coding	principal2	7	-1	10053296	4103
ENSMUSG00000081621	processed_pseudogene	Gm12793	ENSMUST00000119268	processed_pseudogene		4	1	101341357	292
ENSMUSG00000085017	lincRNA	Gm13412	ENSMUST00000150621	lincRNA		2	1	32525031	677
ENSMUSG00000118004	lincRNA	BC026513	ENSMUST00000238024	lincRNA		18	-1	76228858	2156
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000122852	processed_transcript		11	1	70214122	739
ENSMUSG00000082061	processed_pseudogene	Gm12726	ENSMUST00000121621	processed_pseudogene		4	1	105578340	601
ENSMUSG00000094606	protein_coding	Vmn2r50	ENSMUST00000086298	protein_coding	alternative2	7	-1	10053296	4055
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000131468	retained_intron		11	1	70214562	734
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000149880	retained_intron		11	1	70214818	558
ENSMUSG00000063903	protein_coding	Klk1	ENSMUST00000075162	protein_coding	principal1	7	1	44225360	954
ENSMUSG00000101887	unprocessed_pseudogene	Gm21654	ENSMUST00000188086	unprocessed_pseudogene		Y	-1	64013118	691
ENSMUSG00000083614	processed_pseudogene	Gm12795	ENSMUST00000117594	processed_pseudogene		4	-1	101362890	539
ENSMUSG00000026437	protein_coding	Cdk18	ENSMUST00000185601	nonsense_mediated_decay		1	-1	132116690	404
ENSMUSG00000040938	protein_coding	Slc16a11	ENSMUST00000171032	protein_coding	principal1	11	1	70213910	1754
ENSMUSG00000026437	protein_coding	Cdk18	ENSMUST00000189733	retained_intron		1	-1	132116255	509
ENSMUSG00000083780	protein_coding	Gm12728	ENSMUST00000184254	protein_coding	principal5	4	1	105789869	234
ENSMUSG00000083780	protein_coding	Gm12728	ENSMUST00000185012	protein_coding	alternative2	4	1	105790534	234
ENSMUSG00000063903	protein_coding	Klk1	ENSMUST00000205329	retained_intron		7	1	44225438	753
ENSMUSG00000083780	protein_coding	Gm12728	ENSMUST00000119740	translated_processed_pseudogene		4	1	105794219	493
ENSMUSG00000086782	lincRNA	E130102H24Rik	ENSMUST00000144604	lincRNA		4	-1	101356248	741
ENSMUSG00000096940	bidirectional_promoter_lncRNA	Gm4755	ENSMUST00000181803	bidirectional_promoter_lncRNA		12	-1	8771181	2647
ENSMUSG00000063903	protein_coding	Klk1	ENSMUST00000206144	protein_coding		7	1	44225443	755
ENSMUSG00000086782	lincRNA	E130102H24Rik	ENSMUST00000189920	lincRNA		4	-1	101356735	329
ENSMUSG00000026437	protein_coding	Cdk18	ENSMUST00000112362	protein_coding	principal1	1	-1	132139605	1705
ENSMUSG00000100521	unprocessed_pseudogene	Gm29058	ENSMUST00000189510	unprocessed_pseudogene		Y	-1	64043526	615
ENSMUSG00000113050	lincRNA	Gm8016	ENSMUST00000221830	lincRNA		13	-1	68356825	1575
ENSMUSG00000101790	unprocessed_pseudogene	Gm29059	ENSMUST00000191534	unprocessed_pseudogene		Y	-1	64079942	315
ENSMUSG00000022300	protein_coding	Dcaf13	ENSMUST00000022909	protein_coding	principal1	15	1	39112865	1551
ENSMUSG00000107751	processed_pseudogene	Gm6749	ENSMUST00000203838	processed_pseudogene		6	1	108882004	405
ENSMUSG00000085511	antisense	Gm11738	ENSMUST00000134069	antisense		11	1	118114855	2158
ENSMUSG00000109796	processed_pseudogene	Gm6850	ENSMUST00000210031	processed_pseudogene		7	-1	10075043	530
ENSMUSG00000113382	unprocessed_pseudogene	Gm48429	ENSMUST00000221113	unprocessed_pseudogene		13	-1	68469832	153
ENSMUSG00000022300	protein_coding	Dcaf13	ENSMUST00000228436	retained_intron		15	1	39125438	3389
ENSMUSG00000113394	lincRNA	Gm48436	ENSMUST00000221886	lincRNA		13	-1	68491389	504
ENSMUSG00000062073	transcribed_unprocessed_pseudogene	Gm10109	ENSMUST00000072123	processed_transcript		7	-1	44227421	1078
ENSMUSG00000100452	lincRNA	Gm29628	ENSMUST00000187206	lincRNA		Y	1	64116692	1500
ENSMUSG00000100452	lincRNA	Gm29628	ENSMUST00000190214	lincRNA		Y	1	64117147	437
ENSMUSG00000022300	protein_coding	Dcaf13	ENSMUST00000226224	retained_intron		15	1	39132253	6477
ENSMUSG00000087361	lincRNA	0610043K17Rik	ENSMUST00000123107	lincRNA		4	1	101353783	614
ENSMUSG00000022300	protein_coding	Dcaf13	ENSMUST00000227219	retained_intron		15	1	39144959	480
ENSMUSG00000062073	transcribed_unprocessed_pseudogene	Gm10109	ENSMUST00000206890	transcribed_unprocessed_pseudogene		7	-1	44223710	1211
ENSMUSG00000087361	lincRNA	0610043K17Rik	ENSMUST00000142581	lincRNA		4	1	101366651	372
ENSMUSG00000101403	unprocessed_pseudogene	Gm20882	ENSMUST00000191028	unprocessed_pseudogene		Y	-1	64227755	696
ENSMUSG00000110213	processed_pseudogene	Gm45628	ENSMUST00000210849	processed_pseudogene		7	1	46915990	274
ENSMUSG00000058685	protein_coding	Vmn2r51	ENSMUST00000233179	nonsense_mediated_decay		7	-1	10105741	2411
ENSMUSG00000101348	transcribed_unprocessed_pseudogene	Gm7135	ENSMUST00000191257	transcribed_unprocessed_pseudogene		1	1	97346475	1905
ENSMUSG00000085762	antisense	Lrrc75aos2	ENSMUST00000128647	antisense		11	1	62605766	1227
ENSMUSG00000101348	transcribed_unprocessed_pseudogene	Gm7135	ENSMUST00000187538	processed_transcript		1	1	97459682	675
ENSMUSG00000103179	TEC	Gm37171	ENSMUST00000192636	TEC		1	-1	97545448	1185
ENSMUSG00000026433	protein_coding	Rab29	ENSMUST00000112386	protein_coding	principal1	1	1	131867224	1202
ENSMUSG00000085762	antisense	Lrrc75aos2	ENSMUST00000123423	antisense		11	1	62605767	446
ENSMUSG00000074946	protein_coding	Olfr1313	ENSMUST00000213577	protein_coding	principal1	2	-1	112077727	2588
ENSMUSG00000074946	protein_coding	Olfr1313	ENSMUST00000216071	protein_coding	principal1	2	-1	112077843	2599
ENSMUSG00000085170	antisense	Lrrc75aos1	ENSMUST00000142492	antisense		11	1	62634704	779
ENSMUSG00000058685	protein_coding	Vmn2r51	ENSMUST00000094863	protein_coding	principal1	7	-1	10105741	2641
ENSMUSG00000074946	protein_coding	Olfr1313	ENSMUST00000099599	protein_coding	principal1	2	-1	112072583	938
ENSMUSG00000028756	protein_coding	Pink1	ENSMUST00000030536	protein_coding	principal2	4	-1	138326307	2375
ENSMUSG00000101830	unprocessed_pseudogene	Gm20907	ENSMUST00000185201	unprocessed_pseudogene		Y	-1	64302598	693
ENSMUSG00000028756	protein_coding	Pink1	ENSMUST00000105817	protein_coding	alternative2	4	-1	138326240	1711
ENSMUSG00000026433	protein_coding	Rab29	ENSMUST00000027693	protein_coding	principal1	1	1	131867240	1226
ENSMUSG00000044340	protein_coding	Phlpp1	ENSMUST00000061047	protein_coding	principal1	1	1	106171752	6226
ENSMUSG00000029580	protein_coding	Actb	ENSMUST00000100497	protein_coding	principal1	5	-1	142906754	1920
ENSMUSG00000100322	transcribed_unprocessed_pseudogene	Gm29624	ENSMUST00000190185	processed_transcript		Y	-1	64333679	1104
ENSMUSG00000100322	transcribed_unprocessed_pseudogene	Gm29624	ENSMUST00000191148	processed_transcript		Y	-1	64333595	543
ENSMUSG00000029580	protein_coding	Actb	ENSMUST00000196997	processed_transcript		5	-1	142903654	241
ENSMUSG00000100322	transcribed_unprocessed_pseudogene	Gm29624	ENSMUST00000190018	transcribed_unprocessed_pseudogene		Y	-1	64332095	615
ENSMUSG00000029580	protein_coding	Actb	ENSMUST00000167721	protein_coding		5	-1	142906702	1242
ENSMUSG00000044340	protein_coding	Phlpp1	ENSMUST00000135810	retained_intron		1	1	106281425	567
ENSMUSG00000046417	protein_coding	Lrrc75a	ENSMUST00000057194	protein_coding	principal1	11	-1	62648523	1984
ENSMUSG00000026433	protein_coding	Rab29	ENSMUST00000125925	nonsense_mediated_decay		1	1	131867511	661
ENSMUSG00000029580	protein_coding	Actb	ENSMUST00000171419	protein_coding		5	-1	142905821	930
ENSMUSG00000020647	protein_coding	Ncoa1	ENSMUST00000085814	protein_coding	principal2	12	-1	4477182	7329
ENSMUSG00000025154	protein_coding	Arhgap19	ENSMUST00000026150	protein_coding	principal1	19	-1	41802047	5103
ENSMUSG00000044340	protein_coding	Phlpp1	ENSMUST00000124895	processed_transcript		1	1	106317238	387
ENSMUSG00000026433	protein_coding	Rab29	ENSMUST00000187084	retained_intron		1	1	131867653	495
ENSMUSG00000043964	protein_coding	Orai3	ENSMUST00000118865	protein_coding		7	1	127769815	768
ENSMUSG00000103291	TEC	Gm38235	ENSMUST00000194600	TEC		1	1	106219314	4952
ENSMUSG00000051343	protein_coding	Rab11fip5	ENSMUST00000060837	protein_coding	principal3	6	-1	85374564	4035
ENSMUSG00000020647	protein_coding	Ncoa1	ENSMUST00000220434	protein_coding	alternative2	12	-1	4344500	4756
ENSMUSG00000029580	protein_coding	Actb	ENSMUST00000167386	processed_transcript		5	-1	142906725	894
ENSMUSG00000025154	protein_coding	Arhgap19	ENSMUST00000163265	protein_coding		19	-1	41802047	1812
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000166726	protein_coding	alternative2	13	-1	103334192	5968
ENSMUSG00000003452	protein_coding	Bicd1	ENSMUST00000203502	retained_intron		6	1	149408886	10443
ENSMUSG00000046417	protein_coding	Lrrc75a	ENSMUST00000128705	processed_transcript		11	-1	62648040	649
ENSMUSG00000043964	protein_coding	Orai3	ENSMUST00000061587	protein_coding	principal1	7	1	127769815	1996
ENSMUSG00000020647	protein_coding	Ncoa1	ENSMUST00000219373	protein_coding		12	-1	4263578	781
ENSMUSG00000020781	protein_coding	Tsen54	ENSMUST00000021134	protein_coding	principal1	11	1	115814724	1979
ENSMUSG00000025154	protein_coding	Arhgap19	ENSMUST00000177495	protein_coding		19	-1	41802047	1652
ENSMUSG00000041997	protein_coding	Tlk1	ENSMUST00000135128	processed_transcript		2	-1	70825397	4271
ENSMUSG00000029580	protein_coding	Actb	ENSMUST00000163829	protein_coding		5	-1	142906722	401
ENSMUSG00000051343	protein_coding	Rab11fip5	ENSMUST00000204087	protein_coding	alternative2	6	-1	85374634	6119
ENSMUSG00000046417	protein_coding	Lrrc75a	ENSMUST00000143262	processed_transcript		11	-1	62648049	567
ENSMUSG00000043964	protein_coding	Orai3	ENSMUST00000121504	protein_coding		7	1	127769815	2141
ENSMUSG00000020781	protein_coding	Tsen54	ENSMUST00000106481	protein_coding		11	1	115814724	1862
ENSMUSG00000020647	protein_coding	Ncoa1	ENSMUST00000217794	nonsense_mediated_decay		12	-1	4416796	4917
ENSMUSG00000041997	protein_coding	Tlk1	ENSMUST00000124629	processed_transcript		2	-1	70825228	1756
ENSMUSG00000029580	protein_coding	Actb	ENSMUST00000106216	protein_coding		5	-1	142905937	536
ENSMUSG00000051343	protein_coding	Rab11fip5	ENSMUST00000204504	processed_transcript		6	-1	85341637	784
ENSMUSG00000041997	protein_coding	Tlk1	ENSMUST00000132542	processed_transcript		2	-1	70825323	651
ENSMUSG00000041997	protein_coding	Tlk1	ENSMUST00000133734	processed_transcript		2	-1	70825311	521
ENSMUSG00000029580	protein_coding	Actb	ENSMUST00000165629	retained_intron		5	-1	142906672	861
ENSMUSG00000020647	protein_coding	Ncoa1	ENSMUST00000218191	protein_coding		12	-1	4274947	2069
ENSMUSG00000074945	protein_coding	Olfr1314	ENSMUST00000207976	protein_coding	principal1	2	-1	112096781	2976
ENSMUSG00000041997	protein_coding	Tlk1	ENSMUST00000141707	processed_transcript		2	-1	70718224	576
ENSMUSG00000029580	protein_coding	Actb	ENSMUST00000164765	retained_intron		5	-1	142906694	863
ENSMUSG00000000563	protein_coding	Atp5pb	ENSMUST00000118209	protein_coding	principal1	3	-1	105960099	1604
ENSMUSG00000020781	protein_coding	Tsen54	ENSMUST00000129765	retained_intron		11	1	115814746	522
ENSMUSG00000020647	protein_coding	Ncoa1	ENSMUST00000217674	protein_coding		12	-1	4354436	2822
ENSMUSG00000074945	protein_coding	Olfr1314	ENSMUST00000099598	protein_coding	principal1	2	-1	112092699	939
ENSMUSG00000041997	protein_coding	Tlk1	ENSMUST00000152738	processed_transcript		2	-1	70717904	531
ENSMUSG00000078753	protein_coding	Scgb1b24	ENSMUST00000108087	protein_coding	principal1	7	1	33743799	279
ENSMUSG00000020647	protein_coding	Ncoa1	ENSMUST00000219275	protein_coding		12	-1	4313122	745
ENSMUSG00000082029	processed_pseudogene	H3f3c	ENSMUST00000119459	processed_pseudogene		2	-1	119666036	411
ENSMUSG00000020647	protein_coding	Ncoa1	ENSMUST00000217822	retained_intron		12	-1	4344470	365
ENSMUSG00000081416	processed_pseudogene	Gm14383	ENSMUST00000121637	processed_pseudogene		2	1	119669159	386
ENSMUSG00000109033	protein_coding	Olfr1315-ps1	ENSMUST00000207542	protein_coding	principal5	2	-1	112115440	1230
ENSMUSG00000086358	processed_transcript	Gm13270	ENSMUST00000149137	antisense		2	1	13271601	1686
ENSMUSG00000081714	processed_pseudogene	Gm12782	ENSMUST00000117519	processed_pseudogene		7	-1	33781543	727
ENSMUSG00000109033	protein_coding	Olfr1315-ps1	ENSMUST00000217078	protein_coding	principal5	2	-1	112112533	1559
ENSMUSG00000020647	protein_coding	Ncoa1	ENSMUST00000219715	protein_coding		12	-1	4416807	542
ENSMUSG00000086358	processed_transcript	Gm13270	ENSMUST00000193685	retained_intron		2	1	13271602	2782
ENSMUSG00000000563	protein_coding	Atp5pb	ENSMUST00000133320	nonsense_mediated_decay		3	-1	105959276	1311
ENSMUSG00000109033	protein_coding	Olfr1315-ps1	ENSMUST00000208654	protein_coding	alternative2	2	-1	112111256	945
ENSMUSG00000111916	antisense	4921501I09Rik	ENSMUST00000220337	antisense		12	1	4241133	384
ENSMUSG00000101183	unprocessed_pseudogene	Gm28614	ENSMUST00000186483	unprocessed_pseudogene		7	-1	33796135	458
ENSMUSG00000000563	protein_coding	Atp5pb	ENSMUST00000199311	protein_coding		3	-1	105954181	456
ENSMUSG00000081510	processed_pseudogene	Gm12768	ENSMUST00000120055	processed_pseudogene		7	1	33844936	759
ENSMUSG00000036306	protein_coding	Lzts1	ENSMUST00000185176	protein_coding	principal1	8	-1	69184225	5019
ENSMUSG00000084296	unprocessed_pseudogene	Scgb2b25-ps	ENSMUST00000121936	unprocessed_pseudogene		7	-1	33854818	307
ENSMUSG00000109801	protein_coding	Olfr1316	ENSMUST00000213696	protein_coding	alternative1	2	-1	112134977	4184
ENSMUSG00000020781	protein_coding	Tsen54	ENSMUST00000141748	retained_intron		11	1	115814771	858
ENSMUSG00000109801	protein_coding	Olfr1316	ENSMUST00000099596	protein_coding	principal2	2	-1	112130815	945
ENSMUSG00000000563	protein_coding	Atp5pb	ENSMUST00000153666	retained_intron		3	-1	105959264	2527
ENSMUSG00000036306	protein_coding	Lzts1	ENSMUST00000181890	processed_transcript		8	-1	69184215	1784
ENSMUSG00000036306	protein_coding	Lzts1	ENSMUST00000209353	processed_transcript		8	-1	69182230	87
ENSMUSG00000020781	protein_coding	Tsen54	ENSMUST00000128266	retained_intron		11	1	115814805	803
ENSMUSG00000020781	protein_coding	Tsen54	ENSMUST00000136343	protein_coding		11	1	115815698	825
ENSMUSG00000000563	protein_coding	Atp5pb	ENSMUST00000143022	retained_intron		3	-1	105956006	466
ENSMUSG00000100743	unprocessed_pseudogene	Scgb1b25-ps	ENSMUST00000186419	unprocessed_pseudogene		7	1	33867925	415
ENSMUSG00000020865	protein_coding	Abcc3	ENSMUST00000021231	protein_coding	principal2	11	-1	94392976	4999
ENSMUSG00000000563	protein_coding	Atp5pb	ENSMUST00000123959	retained_intron		3	-1	105959246	407
ENSMUSG00000036306	protein_coding	Lzts1	ENSMUST00000184961	processed_transcript		8	-1	69184205	404
ENSMUSG00000050776	protein_coding	Olfr1317	ENSMUST00000214801	protein_coding	principal1	2	1	112140329	2578
ENSMUSG00000081317	processed_pseudogene	Gm12757	ENSMUST00000119465	processed_pseudogene		7	1	33879295	800
ENSMUSG00000050776	protein_coding	Olfr1317	ENSMUST00000213693	processed_transcript		2	1	112140333	2441
ENSMUSG00000020781	protein_coding	Tsen54	ENSMUST00000154304	protein_coding		11	1	115820710	963
ENSMUSG00000050776	protein_coding	Olfr1317	ENSMUST00000216988	protein_coding	principal1	2	1	112140333	2488
ENSMUSG00000020865	protein_coding	Abcc3	ENSMUST00000140985	processed_transcript		11	-1	94351186	567
ENSMUSG00000036306	protein_coding	Lzts1	ENSMUST00000037049	protein_coding	principal1	8	-1	69140953	1800
ENSMUSG00000079602	protein_coding	9230102O04Rik	ENSMUST00000114915	protein_coding	principal1	2	-1	9883993	528
ENSMUSG00000101203	unprocessed_pseudogene	Gm28615	ENSMUST00000187527	unprocessed_pseudogene		7	-1	33904117	482
ENSMUSG00000020781	protein_coding	Tsen54	ENSMUST00000157061	protein_coding		11	1	115820846	494
ENSMUSG00000027207	protein_coding	Galk2	ENSMUST00000028636	protein_coding	principal1	2	1	125859134	2605
ENSMUSG00000050776	protein_coding	Olfr1317	ENSMUST00000060098	protein_coding	principal1	2	1	112141947	951
ENSMUSG00000020865	protein_coding	Abcc3	ENSMUST00000155253	processed_transcript		11	-1	94367923	915
ENSMUSG00000098021	processed_pseudogene	Gm9522	ENSMUST00000182394	processed_pseudogene		15	1	39180511	926
ENSMUSG00000079602	protein_coding	9230102O04Rik	ENSMUST00000125091	processed_transcript		2	-1	9889540	737
ENSMUSG00000020865	protein_coding	Abcc3	ENSMUST00000151124	processed_transcript		11	-1	94392920	1808
ENSMUSG00000027207	protein_coding	Galk2	ENSMUST00000125084	protein_coding		2	1	125859148	658
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000239261	protein_coding	alternative2	13	-1	103096845	9905
ENSMUSG00000020865	protein_coding	Abcc3	ENSMUST00000126566	processed_transcript		11	-1	94392997	667
ENSMUSG00000030780	protein_coding	BC017158	ENSMUST00000147091	retained_intron		7	-1	128274848	2513
ENSMUSG00000020865	protein_coding	Abcc3	ENSMUST00000178136	protein_coding	alternative2	11	-1	94392976	5005
ENSMUSG00000105852	processed_transcript	Gm42890	ENSMUST00000167642	retained_intron		3	1	105959503	2566
ENSMUSG00000103571	TEC	Gm37114	ENSMUST00000195065	TEC		1	1	82105180	1804
ENSMUSG00000102439	protein_coding	Flg	ENSMUST00000216295	TEC		3	1	93273523	4523
ENSMUSG00000105852	processed_transcript	Gm42890	ENSMUST00000137168	retained_intron		3	1	105966115	1580
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000167058	protein_coding	principal2	13	-1	103334460	10636
ENSMUSG00000025783	protein_coding	4930412O13Rik	ENSMUST00000026889	protein_coding	principal5	2	1	9881252	1187
ENSMUSG00000102439	protein_coding	Flg	ENSMUST00000214837	processed_transcript		3	1	93273541	14497
ENSMUSG00000102439	protein_coding	Flg	ENSMUST00000179250	protein_coding	alternative2	3	1	93288095	765
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000155530	nonsense_mediated_decay		2	-1	12419435	2257
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000194446	protein_coding	alternative2	13	-1	103096845	7571
ENSMUSG00000102439	protein_coding	Flg	ENSMUST00000050758	protein_coding		3	1	93292199	1488
ENSMUSG00000025783	protein_coding	4930412O13Rik	ENSMUST00000114919	protein_coding	alternative2	2	1	9882636	558
ENSMUSG00000102439	protein_coding	Flg	ENSMUST00000178695	protein_coding	principal5	3	1	93284302	777
ENSMUSG00000099735	antisense	1700122H20Rik	ENSMUST00000188950	antisense		17	1	6895940	421
ENSMUSG00000102439	protein_coding	Flg	ENSMUST00000179477	protein_coding	alternative2	3	1	93286577	768
ENSMUSG00000102439	protein_coding	Flg	ENSMUST00000178008	protein_coding	alternative2	3	1	93281325	768
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000171791	protein_coding	alternative2	13	-1	102906106	7647
ENSMUSG00000102439	protein_coding	Flg	ENSMUST00000180293	protein_coding	alternative2	3	1	93290366	768
ENSMUSG00000102439	protein_coding	Flg	ENSMUST00000180308	protein_coding		3	1	93277568	1076
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000099202	protein_coding	alternative2	13	-1	102958467	7709
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000167462	protein_coding		13	-1	102905786	3025
ENSMUSG00000102439	protein_coding	Flg	ENSMUST00000178752	protein_coding	alternative2	3	1	93282826	756
ENSMUSG00000040485	protein_coding	Lrrc52	ENSMUST00000036643	protein_coding	principal1	1	-1	167466780	1143
ENSMUSG00000081640	processed_pseudogene	Rplp0-ps1	ENSMUST00000122125	processed_pseudogene		3	1	93278141	933
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000172264	protein_coding		13	-1	102958346	2867
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000164211	retained_intron		13	-1	102771069	3472
ENSMUSG00000026342	protein_coding	Slc35f5	ENSMUST00000190037	protein_coding		1	1	125560595	627
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000191417	retained_intron		13	-1	102781917	4231
ENSMUSG00000021359	protein_coding	Tfap2a	ENSMUST00000021787	protein_coding	alternative1	13	-1	40730443	3487
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000166336	protein_coding		13	-1	103096828	636
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000185947	retained_intron		13	-1	102800921	4009
ENSMUSG00000017715	protein_coding	Pgs1	ENSMUST00000132676	protein_coding	principal1	11	1	117986292	2863
ENSMUSG00000027207	protein_coding	Galk2	ENSMUST00000131643	nonsense_mediated_decay		2	1	125866254	785
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000164111	protein_coding		13	-1	103334460	2350
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000129489	nonsense_mediated_decay		2	-1	12419444	2316
ENSMUSG00000027207	protein_coding	Galk2	ENSMUST00000135782	processed_transcript		2	1	125859109	619
ENSMUSG00000027207	protein_coding	Galk2	ENSMUST00000134337	protein_coding		2	1	125866107	723
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000166867	retained_intron		13	-1	102906075	685
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000154899	nonsense_mediated_decay		2	-1	12419448	1984
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000194533	processed_transcript		2	-1	12419448	1843
ENSMUSG00000027207	protein_coding	Galk2	ENSMUST00000140873	processed_transcript		2	1	125866243	2910
ENSMUSG00000027207	protein_coding	Galk2	ENSMUST00000134798	protein_coding		2	1	125866250	470
ENSMUSG00000000693	protein_coding	Loxl3	ENSMUST00000152679	processed_transcript		6	1	83034173	462
ENSMUSG00000017715	protein_coding	Pgs1	ENSMUST00000017859	nonsense_mediated_decay		11	1	117986885	2197
ENSMUSG00000017715	protein_coding	Pgs1	ENSMUST00000100185	nonsense_mediated_decay		11	1	118000795	1953
ENSMUSG00000027207	protein_coding	Galk2	ENSMUST00000094604	protein_coding		2	1	125866107	1928
ENSMUSG00000021359	protein_coding	Tfap2a	ENSMUST00000224319	processed_transcript		13	-1	40731607	2525
ENSMUSG00000017715	protein_coding	Pgs1	ENSMUST00000155507	retained_intron		11	1	118012343	3113
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000169605	retained_intron		13	-1	103334462	3318
ENSMUSG00000021048	protein_coding	Mthfd1	ENSMUST00000021443	protein_coding	principal1	12	1	76255298	3241
ENSMUSG00000027207	protein_coding	Galk2	ENSMUST00000110454	retained_intron		2	1	125866268	1388
ENSMUSG00000021359	protein_coding	Tfap2a	ENSMUST00000223869	protein_coding	alternative1	13	-1	40738376	2037
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000171358	processed_transcript		13	-1	103334497	1003
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000168226	processed_transcript		13	-1	103334451	3040
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000185314	retained_intron		13	-1	103096844	2668
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000211607	processed_transcript		13	-1	103171529	249
ENSMUSG00000055991	protein_coding	Zkscan5	ENSMUST00000085671	protein_coding	principal3	5	1	145204562	3794
ENSMUSG00000021359	protein_coding	Tfap2a	ENSMUST00000225180	protein_coding		13	-1	40728944	1828
ENSMUSG00000034751	protein_coding	Mast4	ENSMUST00000187024	retained_intron		13	-1	103334492	1521
ENSMUSG00000021048	protein_coding	Mthfd1	ENSMUST00000220046	protein_coding		12	1	76255413	3040
ENSMUSG00000021359	protein_coding	Tfap2a	ENSMUST00000224999	protein_coding	alternative1	13	-1	40734920	2058
ENSMUSG00000090329	antisense	Gm17160	ENSMUST00000170645	antisense		13	1	102762435	260
ENSMUSG00000041362	protein_coding	Shtn1	ENSMUST00000163821	protein_coding	principal1	19	-1	59076069	3769
ENSMUSG00000021048	protein_coding	Mthfd1	ENSMUST00000218110	retained_intron		12	1	76255480	642
ENSMUSG00000102910	IG_V_pseudogene	Gm37722	ENSMUST00000193757	IG_V_pseudogene		12	-1	113772334	208
ENSMUSG00000021359	protein_coding	Tfap2a	ENSMUST00000224665	protein_coding	alternative1	13	-1	40733975	1958
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000068892	protein_coding	principal4	8	-1	25840787	3307
ENSMUSG00000055991	protein_coding	Zkscan5	ENSMUST00000031601	protein_coding	alternative2	5	1	145204668	3469
ENSMUSG00000021359	protein_coding	Tfap2a	ENSMUST00000223908	retained_intron		13	-1	40733778	1112
ENSMUSG00000021359	protein_coding	Tfap2a	ENSMUST00000224700	processed_transcript		13	-1	40729403	573
ENSMUSG00000027002	protein_coding	Nckap1	ENSMUST00000028386	protein_coding	principal3	2	-1	80581264	4469
ENSMUSG00000021048	protein_coding	Mthfd1	ENSMUST00000218331	processed_transcript		12	1	76293065	359
ENSMUSG00000021359	protein_coding	Tfap2a	ENSMUST00000110193	protein_coding	principal3	13	-1	40733823	2863
ENSMUSG00000055991	protein_coding	Zkscan5	ENSMUST00000161896	nonsense_mediated_decay		5	1	145205123	1227
ENSMUSG00000021048	protein_coding	Mthfd1	ENSMUST00000218010	retained_intron		12	1	76293778	674
ENSMUSG00000027002	protein_coding	Nckap1	ENSMUST00000111760	protein_coding	alternative1	2	-1	80581380	4597
ENSMUSG00000111374	processed_pseudogene	Gm50490	ENSMUST00000214664	processed_pseudogene		10	-1	49094729	724
ENSMUSG00000021048	protein_coding	Mthfd1	ENSMUST00000218513	retained_intron		12	1	76297515	406
ENSMUSG00000003779	protein_coding	Kif20a	ENSMUST00000167161	protein_coding	principal1	18	1	34624613	3146
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000139946	nonsense_mediated_decay		8	-1	25840762	2659
ENSMUSG00000055991	protein_coding	Zkscan5	ENSMUST00000162168	nonsense_mediated_decay		5	1	145207604	622
ENSMUSG00000041362	protein_coding	Shtn1	ENSMUST00000047511	protein_coding		19	-1	59076100	3974
ENSMUSG00000021048	protein_coding	Mthfd1	ENSMUST00000220321	protein_coding		12	1	76307066	738
ENSMUSG00000014402	protein_coding	Tsg101	ENSMUST00000014546	protein_coding	principal1	7	-1	46919969	1949
ENSMUSG00000108244	lincRNA	Gm44077	ENSMUST00000203453	lincRNA		6	1	52012601	435
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000151856	nonsense_mediated_decay		8	-1	25840769	3315
ENSMUSG00000055991	protein_coding	Zkscan5	ENSMUST00000161881	protein_coding		5	1	145207634	443
ENSMUSG00000055991	protein_coding	Zkscan5	ENSMUST00000160162	processed_transcript		5	1	145208568	378
ENSMUSG00000027002	protein_coding	Nckap1	ENSMUST00000154793	processed_transcript		2	-1	80525680	687
ENSMUSG00000112784	antisense	Gm34868	ENSMUST00000218341	antisense		12	-1	76306983	530
ENSMUSG00000030683	protein_coding	Sez6l2	ENSMUST00000106335	protein_coding	alternative1	7	1	126950563	3732
ENSMUSG00000112138	processed_pseudogene	Gm47526	ENSMUST00000218456	processed_pseudogene		12	-1	76277716	331
ENSMUSG00000003779	protein_coding	Kif20a	ENSMUST00000237407	protein_coding	principal1	18	1	34624735	3674
ENSMUSG00000014402	protein_coding	Tsg101	ENSMUST00000146130	processed_transcript		7	-1	46891027	897
ENSMUSG00000015619	protein_coding	Gata3	ENSMUST00000102976	protein_coding	principal1	2	-1	9878600	3215
ENSMUSG00000030683	protein_coding	Sez6l2	ENSMUST00000146017	protein_coding		7	1	126950584	1192
ENSMUSG00000014402	protein_coding	Tsg101	ENSMUST00000209538	protein_coding		7	-1	46909006	791
ENSMUSG00000041362	protein_coding	Shtn1	ENSMUST00000237215	retained_intron		19	-1	59038285	2881
ENSMUSG00000015619	protein_coding	Gata3	ENSMUST00000151456	processed_transcript		2	-1	9873672	243
ENSMUSG00000014402	protein_coding	Tsg101	ENSMUST00000156335	protein_coding		7	-1	46919891	661
ENSMUSG00000027002	protein_coding	Nckap1	ENSMUST00000131872	processed_transcript		2	-1	80555070	885
ENSMUSG00000015619	protein_coding	Gata3	ENSMUST00000153509	processed_transcript		2	-1	9875399	731
ENSMUSG00000003779	protein_coding	Kif20a	ENSMUST00000237481	nonsense_mediated_decay		18	1	34625007	2945
ENSMUSG00000045246	protein_coding	Kcng4	ENSMUST00000061828	protein_coding	principal1	8	-1	119635680	3806
ENSMUSG00000027002	protein_coding	Nckap1	ENSMUST00000134587	processed_transcript		2	-1	80554790	498
ENSMUSG00000015619	protein_coding	Gata3	ENSMUST00000130615	protein_coding		2	-1	9890034	674
ENSMUSG00000038201	protein_coding	Kcna7	ENSMUST00000107774	protein_coding	principal1	7	1	45405653	2182
ENSMUSG00000081487	processed_pseudogene	Gm13689	ENSMUST00000119360	processed_pseudogene		2	-1	80550396	685
ENSMUSG00000014402	protein_coding	Tsg101	ENSMUST00000211076	nonsense_mediated_decay		7	-1	46919944	712
ENSMUSG00000015619	protein_coding	Gata3	ENSMUST00000147533	processed_transcript		2	-1	9887784	344
ENSMUSG00000024619	protein_coding	Cdx1	ENSMUST00000025521	protein_coding	principal1	18	-1	61036199	1750
ENSMUSG00000045246	protein_coding	Kcng4	ENSMUST00000164382	protein_coding	principal1	8	-1	119635346	1875
ENSMUSG00000015619	protein_coding	Gata3	ENSMUST00000142305	processed_transcript		2	-1	9890002	281
ENSMUSG00000003779	protein_coding	Kif20a	ENSMUST00000166044	protein_coding	principal1	18	1	34625033	3107
ENSMUSG00000102848	IG_V_pseudogene	Ighv5-7	ENSMUST00000192302	IG_V_pseudogene		12	-1	113635160	244
ENSMUSG00000109664	processed_pseudogene	Gm9520	ENSMUST00000209460	processed_pseudogene		8	1	82160623	1253
ENSMUSG00000014402	protein_coding	Tsg101	ENSMUST00000211595	processed_transcript		7	-1	46914410	807
ENSMUSG00000086618	antisense	Gm13256	ENSMUST00000131297	antisense		2	1	9877256	520
ENSMUSG00000110045	lincRNA	Gm38590	ENSMUST00000210654	lincRNA		8	-1	82207386	1803
ENSMUSG00000110045	lincRNA	Gm38590	ENSMUST00000209515	lincRNA		8	-1	82207535	970
ENSMUSG00000014402	protein_coding	Tsg101	ENSMUST00000210664	protein_coding		7	-1	46919869	453
ENSMUSG00000026342	protein_coding	Slc35f5	ENSMUST00000027580	protein_coding	principal1	1	1	125561016	2733
ENSMUSG00000003779	protein_coding	Kif20a	ENSMUST00000235174	retained_intron		18	1	34625451	549
ENSMUSG00000030683	protein_coding	Sez6l2	ENSMUST00000106333	protein_coding	principal3	7	1	126950729	3595
ENSMUSG00000014402	protein_coding	Tsg101	ENSMUST00000140693	retained_intron		7	-1	46909045	730
ENSMUSG00000103184	IG_V_pseudogene	Ighv5-13	ENSMUST00000193550	IG_V_pseudogene		12	-1	113794538	290
ENSMUSG00000014402	protein_coding	Tsg101	ENSMUST00000143413	protein_coding		7	-1	46919937	493
ENSMUSG00000085115	processed_pseudogene	Gm11197	ENSMUST00000145158	processed_pseudogene		11	-1	78709761	839
ENSMUSG00000003779	protein_coding	Kif20a	ENSMUST00000236114	protein_coding		18	1	34628923	831
ENSMUSG00000026342	protein_coding	Slc35f5	ENSMUST00000189443	nonsense_mediated_decay		1	1	125584513	756
ENSMUSG00000045948	protein_coding	Mrps12	ENSMUST00000165246	processed_transcript		7	-1	28740067	380
ENSMUSG00000030683	protein_coding	Sez6l2	ENSMUST00000106332	protein_coding		7	1	126950966	2852
ENSMUSG00000083284	processed_pseudogene	Gm13688	ENSMUST00000121557	processed_pseudogene		2	1	80602733	608
ENSMUSG00000109677	processed_pseudogene	Gm45514	ENSMUST00000211531	processed_pseudogene		7	-1	137336429	689
ENSMUSG00000000693	protein_coding	Loxl3	ENSMUST00000000707	protein_coding	principal1	6	1	83034173	4098
ENSMUSG00000109843	processed_pseudogene	Gm17841	ENSMUST00000210711	processed_pseudogene		7	1	137370836	2425
ENSMUSG00000030683	protein_coding	Sez6l2	ENSMUST00000125669	protein_coding		7	1	126953867	641
ENSMUSG00000095866	IG_V_gene	Ighv2-4	ENSMUST00000103447	IG_V_gene	principal1	12	-1	113653724	350
ENSMUSG00000025161	protein_coding	Slc16a3	ENSMUST00000070653	protein_coding	principal1	11	1	120948480	2272
ENSMUSG00000000693	protein_coding	Loxl3	ENSMUST00000101257	protein_coding		6	1	83034173	3252
ENSMUSG00000083368	processed_pseudogene	Gm13214	ENSMUST00000122137	processed_pseudogene		4	1	132093891	408
ENSMUSG00000030683	protein_coding	Sez6l2	ENSMUST00000134471	retained_intron		7	1	126967743	639
ENSMUSG00000045948	protein_coding	Mrps12	ENSMUST00000171183	protein_coding	principal1	7	-1	28741770	883
ENSMUSG00000000693	protein_coding	Loxl3	ENSMUST00000204318	processed_transcript		6	1	83038400	617
ENSMUSG00000066441	protein_coding	Rdh11	ENSMUST00000161204	protein_coding	principal2	12	-1	79192293	3262
ENSMUSG00000025161	protein_coding	Slc16a3	ENSMUST00000154187	protein_coding		11	1	120949053	974
ENSMUSG00000030683	protein_coding	Sez6l2	ENSMUST00000155138	nonsense_mediated_decay		7	1	126967969	575
ENSMUSG00000000693	protein_coding	Loxl3	ENSMUST00000155502	retained_intron		6	1	83049868	611
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000110610	protein_coding	alternative2	8	-1	25847694	2337
ENSMUSG00000035011	protein_coding	Zbtb7a	ENSMUST00000125261	protein_coding		10	1	81135220	907
ENSMUSG00000112230	lincRNA	Ifngas1	ENSMUST00000239416	lincRNA		10	-1	118555352	1165
ENSMUSG00000066441	protein_coding	Rdh11	ENSMUST00000085254	protein_coding	alternative2	12	-1	79190961	1673
ENSMUSG00000025161	protein_coding	Slc16a3	ENSMUST00000129473	protein_coding		11	1	120949071	975
ENSMUSG00000030780	protein_coding	BC017158	ENSMUST00000033044	protein_coding	principal1	7	-1	128298170	2627
ENSMUSG00000025161	protein_coding	Slc16a3	ENSMUST00000133029	protein_coding		11	1	120950688	353
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000110609	protein_coding	alternative2	8	-1	25840457	2300
ENSMUSG00000049489	protein_coding	Ccnq	ENSMUST00000059468	protein_coding	principal1	11	-1	78751729	1224
ENSMUSG00000025161	protein_coding	Slc16a3	ENSMUST00000140467	processed_transcript		11	1	120951138	395
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000110608	protein_coding		8	-1	25840770	2134
ENSMUSG00000066441	protein_coding	Rdh11	ENSMUST00000159500	nonsense_mediated_decay		12	-1	79191793	815
ENSMUSG00000112230	lincRNA	Ifngas1	ENSMUST00000220034	lincRNA		10	-1	118556525	1121
ENSMUSG00000025161	protein_coding	Slc16a3	ENSMUST00000134540	retained_intron		11	1	120955226	677
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000119353	protein_coding	alternative2	8	1	70527724	1720
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000149550	retained_intron		8	-1	25823575	577
ENSMUSG00000103262	IG_V_pseudogene	Ighv5-8	ENSMUST00000191967	IG_V_pseudogene		12	-1	113655424	337
ENSMUSG00000110538	processed_pseudogene	Gm33178	ENSMUST00000212090	processed_pseudogene		8	-1	69225792	257
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000142358	retained_intron		8	-1	25829360	976
ENSMUSG00000102796	TEC	Gm37711	ENSMUST00000194907	TEC		4	-1	132109363	1749
ENSMUSG00000045948	protein_coding	Mrps12	ENSMUST00000056078	protein_coding	principal1	7	-1	28741820	722
ENSMUSG00000025161	protein_coding	Slc16a3	ENSMUST00000168579	protein_coding	principal1	11	1	120949081	4335
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000156759	processed_transcript		8	-1	25828816	442
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000211188	retained_intron		8	-1	25833545	3702
ENSMUSG00000045948	protein_coding	Mrps12	ENSMUST00000165004	protein_coding		7	-1	28740821	455
ENSMUSG00000025161	protein_coding	Slc16a3	ENSMUST00000100130	protein_coding	principal1	11	1	120949067	2386
ENSMUSG00000059897	protein_coding	Zfp930	ENSMUST00000212681	protein_coding	principal1	8	1	69209038	3001
ENSMUSG00000100629	antisense	Gm28192	ENSMUST00000189381	antisense		11	1	120963844	778
ENSMUSG00000059897	protein_coding	Zfp930	ENSMUST00000212312	protein_coding		8	1	69209046	493
ENSMUSG00000095285	IG_V_gene	Ighv5-9	ENSMUST00000103448	IG_V_gene	principal1	12	-1	113662293	418
ENSMUSG00000053475	protein_coding	Tnfaip6	ENSMUST00000065927	protein_coding	principal1	2	1	52038009	1710
ENSMUSG00000059897	protein_coding	Zfp930	ENSMUST00000212020	retained_intron		8	1	69209048	2327
ENSMUSG00000031575	protein_coding	Ash2l	ENSMUST00000166078	protein_coding	alternative2	8	-1	25840082	2234
ENSMUSG00000085412	lincRNA	Halr1	ENSMUST00000125374	lincRNA		6	1	52102949	391
ENSMUSG00000059897	protein_coding	Zfp930	ENSMUST00000110216	protein_coding		8	1	69226343	1323
ENSMUSG00000085412	lincRNA	Halr1	ENSMUST00000189071	lincRNA		6	1	52102994	511
ENSMUSG00000107501	processed_pseudogene	Gm29781	ENSMUST00000203862	processed_pseudogene		6	1	109125685	478
ENSMUSG00000085412	lincRNA	Halr1	ENSMUST00000155758	lincRNA		6	1	52103003	408
ENSMUSG00000075284	protein_coding	Wipf1	ENSMUST00000094681	protein_coding	principal1	2	-1	73529734	4728
ENSMUSG00000107641	processed_pseudogene	Gm32858	ENSMUST00000205246	processed_pseudogene		6	1	109214242	585
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000075491	protein_coding	principal4	8	1	70527747	1698
ENSMUSG00000107404	processed_pseudogene	Gm44125	ENSMUST00000203068	processed_pseudogene		6	-1	109386922	448
ENSMUSG00000101089	antisense	2610016A17Rik	ENSMUST00000185211	antisense		19	-1	25672239	474
ENSMUSG00000107551	processed_pseudogene	Gm4605	ENSMUST00000203148	processed_pseudogene		6	-1	109444225	625
ENSMUSG00000073424	protein_coding	Cyp4f15	ENSMUST00000168171	protein_coding	principal3	17	1	32685627	2168
ENSMUSG00000101089	antisense	2610016A17Rik	ENSMUST00000188711	antisense		19	-1	25672222	515
ENSMUSG00000075284	protein_coding	Wipf1	ENSMUST00000102680	protein_coding	principal1	2	-1	73485763	4032
ENSMUSG00000101089	antisense	2610016A17Rik	ENSMUST00000186768	antisense		19	-1	25672253	689
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000144766	retained_intron		8	1	70527762	1551
ENSMUSG00000068302	protein_coding	Noto	ENSMUST00000089578	protein_coding	principal1	6	1	85423886	1602
ENSMUSG00000073424	protein_coding	Cyp4f15	ENSMUST00000167789	retained_intron		17	1	32685668	602
ENSMUSG00000075284	protein_coding	Wipf1	ENSMUST00000102679	protein_coding	principal1	2	-1	73453979	2039
ENSMUSG00000073424	protein_coding	Cyp4f15	ENSMUST00000163907	processed_transcript		17	1	32685671	384
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000119698	protein_coding	principal4	8	1	70527846	1799
ENSMUSG00000029581	protein_coding	Fscn1	ENSMUST00000031565	protein_coding	principal1	5	1	142960343	2675
ENSMUSG00000073424	protein_coding	Cyp4f15	ENSMUST00000008801	protein_coding	alternative2	17	1	32685679	2095
ENSMUSG00000068302	protein_coding	Noto	ENSMUST00000174469	protein_coding		6	1	85424068	608
ENSMUSG00000075284	protein_coding	Wipf1	ENSMUST00000143061	processed_transcript		2	-1	73529479	374
ENSMUSG00000030780	protein_coding	BC017158	ENSMUST00000155177	retained_intron		7	-1	128298108	1921
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000128513	retained_intron		8	1	70528009	1235
ENSMUSG00000075284	protein_coding	Wipf1	ENSMUST00000129594	processed_transcript		2	-1	73529382	354
ENSMUSG00000084758	lincRNA	Gm12798	ENSMUST00000124786	lincRNA		4	1	101403081	666
ENSMUSG00000072640	protein_coding	Lyrm9	ENSMUST00000147875	protein_coding	principal1	11	1	78826584	8035
ENSMUSG00000030780	protein_coding	BC017158	ENSMUST00000154003	retained_intron		7	-1	128298109	3302
ENSMUSG00000103394	TEC	Gm10152	ENSMUST00000193475	TEC		7	1	144763139	1344
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000119425	protein_coding		8	1	70528816	644
ENSMUSG00000110657	processed_pseudogene	Gm7684	ENSMUST00000211891	processed_pseudogene		8	-1	69240030	829
ENSMUSG00000026726	protein_coding	Cubn	ENSMUST00000091436	protein_coding	principal1	2	-1	13491813	11262
ENSMUSG00000029581	protein_coding	Fscn1	ENSMUST00000198017	protein_coding		5	1	142960376	2157
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000087514	protein_coding	principal1	5	1	38220470	1563
ENSMUSG00000030780	protein_coding	BC017158	ENSMUST00000126263	nonsense_mediated_decay		7	-1	128298095	1625
ENSMUSG00000072640	protein_coding	Lyrm9	ENSMUST00000141321	protein_coding		11	1	78826604	341
ENSMUSG00000029581	protein_coding	Fscn1	ENSMUST00000129306	protein_coding		5	1	142960843	797
ENSMUSG00000030780	protein_coding	BC017158	ENSMUST00000139452	retained_intron		7	-1	128297576	736
ENSMUSG00000017493	protein_coding	Igfbp4	ENSMUST00000017637	protein_coding	principal1	11	1	99041244	3831
ENSMUSG00000072640	protein_coding	Lyrm9	ENSMUST00000100748	processed_transcript		11	1	78826629	365
ENSMUSG00000020937	protein_coding	Plcd3	ENSMUST00000128650	protein_coding		11	-1	103078294	1952
ENSMUSG00000030780	protein_coding	BC017158	ENSMUST00000124216	retained_intron		7	-1	128288705	720
ENSMUSG00000030780	protein_coding	BC017158	ENSMUST00000137677	protein_coding		7	-1	128290615	464
ENSMUSG00000075284	protein_coding	Wipf1	ENSMUST00000141264	protein_coding		2	-1	73486469	717
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000125741	retained_intron		8	1	70531124	599
ENSMUSG00000104278	IG_V_pseudogene	Ighv5-10	ENSMUST00000194591	IG_V_pseudogene		12	-1	113670147	252
ENSMUSG00000042737	protein_coding	Dpm3	ENSMUST00000107462	protein_coding	principal1	3	1	89259358	827
ENSMUSG00000017493	protein_coding	Igfbp4	ENSMUST00000177092	protein_coding		11	1	99041760	489
ENSMUSG00000075284	protein_coding	Wipf1	ENSMUST00000151939	protein_coding		2	-1	73452710	532
ENSMUSG00000042737	protein_coding	Dpm3	ENSMUST00000137975	retained_intron		3	1	89266639	441
ENSMUSG00000017493	protein_coding	Igfbp4	ENSMUST00000177105	processed_transcript		11	1	99042186	452
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000146735	retained_intron		7	1	128265657	445
ENSMUSG00000086069	lincRNA	Gm13708	ENSMUST00000145170	lincRNA		2	1	73459705	390
ENSMUSG00000042737	protein_coding	Dpm3	ENSMUST00000040824	protein_coding	principal1	3	1	89266552	404
ENSMUSG00000035011	protein_coding	Zbtb7a	ENSMUST00000048128	protein_coding	principal1	10	1	81136271	5938
ENSMUSG00000026726	protein_coding	Cubn	ENSMUST00000195447	retained_intron		2	-1	13455627	5227
ENSMUSG00000029581	protein_coding	Fscn1	ENSMUST00000150622	processed_transcript		5	1	142962953	344
ENSMUSG00000026726	protein_coding	Cubn	ENSMUST00000148506	retained_intron		2	-1	13459480	588
ENSMUSG00000017493	protein_coding	Igfbp4	ENSMUST00000130530	processed_transcript		11	1	99043597	785
ENSMUSG00000099350	unprocessed_pseudogene	Gm29623	ENSMUST00000188316	unprocessed_pseudogene		Y	-1	64368854	696
ENSMUSG00000029581	protein_coding	Fscn1	ENSMUST00000137552	processed_transcript		5	1	142963250	566
ENSMUSG00000109009	lincRNA	Gm44929	ENSMUST00000209134	lincRNA		7	1	144764763	1653
ENSMUSG00000017493	protein_coding	Igfbp4	ENSMUST00000123946	processed_transcript		11	1	99044766	799
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000130721	protein_coding		5	1	38220482	873
ENSMUSG00000029581	protein_coding	Fscn1	ENSMUST00000139131	processed_transcript		5	1	142964533	600
ENSMUSG00000100329	lincRNA	Gm29622	ENSMUST00000190914	lincRNA		Y	-1	64378051	2165
ENSMUSG00000109009	lincRNA	Gm44929	ENSMUST00000208181	lincRNA		7	1	144764914	1337
ENSMUSG00000035011	protein_coding	Zbtb7a	ENSMUST00000119606	protein_coding	principal1	10	1	81136549	1841
ENSMUSG00000017493	protein_coding	Igfbp4	ENSMUST00000140772	protein_coding		11	1	99047311	742
ENSMUSG00000109442	lincRNA	Gm34964	ENSMUST00000207398	lincRNA		7	-1	144791808	417
ENSMUSG00000029581	protein_coding	Fscn1	ENSMUST00000135293	retained_intron		5	1	142970085	466
ENSMUSG00000048628	lincRNA	4930542C16Rik	ENSMUST00000212108	lincRNA		14	-1	24617467	1207
ENSMUSG00000035011	protein_coding	Zbtb7a	ENSMUST00000146895	protein_coding		10	1	81136566	362
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000123052	retained_intron		8	1	70531734	734
ENSMUSG00000035011	protein_coding	Zbtb7a	ENSMUST00000121840	protein_coding		10	1	81136578	1676
ENSMUSG00000048628	lincRNA	4930542C16Rik	ENSMUST00000159360	lincRNA		14	-1	24617311	457
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000123207	protein_coding		5	1	38220520	557
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000134299	retained_intron		8	1	70532121	944
ENSMUSG00000035011	protein_coding	Zbtb7a	ENSMUST00000117956	protein_coding	principal1	10	1	81137953	1863
ENSMUSG00000051246	protein_coding	Msantd1	ENSMUST00000201636	processed_transcript		5	1	34908012	262
ENSMUSG00000050511	protein_coding	Oprd1	ENSMUST00000056336	protein_coding	principal1	4	-1	132144486	4021
ENSMUSG00000048628	lincRNA	4930542C16Rik	ENSMUST00000062438	lincRNA		14	-1	24617304	1090
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000126613	retained_intron		8	1	70532184	1029
ENSMUSG00000040139	protein_coding	9430038I01Rik	ENSMUST00000145881	processed_transcript		7	-1	137410756	895
ENSMUSG00000019428	protein_coding	Fkbp8	ENSMUST00000134893	nonsense_mediated_decay		8	1	70534117	496
ENSMUSG00000036622	protein_coding	Atp13a2	ENSMUST00000168047	protein_coding		4	1	140986873	3105
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000132190	protein_coding		5	1	38220527	885
ENSMUSG00000102182	IG_pseudogene	Gm37187	ENSMUST00000193425	IG_pseudogene		12	-1	113682891	341
ENSMUSG00000076646	IG_V_gene	Ighv2-6-8	ENSMUST00000192911	IG_V_gene	principal5	12	-1	113796567	350
ENSMUSG00000076646	IG_V_gene	Ighv2-6-8	ENSMUST00000103455	IG_V_gene	alternative2	12	-1	113796567	342
ENSMUSG00000051246	protein_coding	Msantd1	ENSMUST00000212362	protein_coding	principal1	5	1	34915088	798
ENSMUSG00000020937	protein_coding	Plcd3	ENSMUST00000103077	protein_coding	principal1	11	-1	103101658	3023
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000092618	protein_coding	principal1	6	1	83054521	1769
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000202506	protein_coding		5	1	38220528	554
ENSMUSG00000020937	protein_coding	Plcd3	ENSMUST00000124740	processed_transcript		11	-1	103071750	591
ENSMUSG00000020937	protein_coding	Plcd3	ENSMUST00000143012	processed_transcript		11	-1	103101618	509
ENSMUSG00000028699	protein_coding	Tspan1	ENSMUST00000030465	protein_coding	principal1	4	-1	116167600	1985
ENSMUSG00000092402	sense_intronic	Gm20485	ENSMUST00000174452	sense_intronic		5	-1	136869722	394
ENSMUSG00000020937	protein_coding	Plcd3	ENSMUST00000142970	processed_transcript		11	-1	103101591	425
ENSMUSG00000051246	protein_coding	Msantd1	ENSMUST00000050535	protein_coding		5	1	34915915	2793
ENSMUSG00000100026	unprocessed_pseudogene	Gm29105	ENSMUST00000187256	unprocessed_pseudogene		1	1	131907165	450
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000154975	nonsense_mediated_decay		5	1	38220529	898
ENSMUSG00000028699	protein_coding	Tspan1	ENSMUST00000143426	protein_coding		4	-1	116167601	853
ENSMUSG00000051246	protein_coding	Msantd1	ENSMUST00000202205	protein_coding		5	1	34917539	744
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000152066	protein_coding		5	1	38220550	504
ENSMUSG00000028699	protein_coding	Tspan1	ENSMUST00000154534	retained_intron		4	-1	116164833	901
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000155300	protein_coding		5	1	38220554	744
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000120204	protein_coding	alternative2	4	1	129984870	5170
ENSMUSG00000043618	processed_pseudogene	Eif5al3-ps	ENSMUST00000135410	processed_pseudogene		5	1	90132229	447
ENSMUSG00000040139	protein_coding	9430038I01Rik	ENSMUST00000068996	protein_coding	principal2	7	-1	137410762	1126
ENSMUSG00000108272	processed_pseudogene	Gm44161	ENSMUST00000203532	processed_pseudogene		6	1	109550371	253
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000114106	protein_coding	principal1	5	1	38220678	1504
ENSMUSG00000035713	protein_coding	Usp35	ENSMUST00000139582	protein_coding	principal1	7	-1	97332020	4262
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000028105	protein_coding	principal1	2	-1	12419470	2344
ENSMUSG00000040139	protein_coding	9430038I01Rik	ENSMUST00000117404	protein_coding	alternative2	7	-1	137410735	699
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000146401	nonsense_mediated_decay		5	1	38222965	674
ENSMUSG00000040139	protein_coding	9430038I01Rik	ENSMUST00000135335	retained_intron		7	-1	137410756	4805
ENSMUSG00000067367	protein_coding	Lyar	ENSMUST00000131492	retained_intron		5	1	38224648	722
ENSMUSG00000040139	protein_coding	9430038I01Rik	ENSMUST00000120340	protein_coding	alternative2	7	-1	137410732	4643
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000144645	nonsense_mediated_decay		2	-1	12419452	2028
ENSMUSG00000101015	processed_pseudogene	Gm18444	ENSMUST00000191239	processed_pseudogene		1	-1	125668616	629
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000135397	nonsense_mediated_decay		2	-1	12356911	875
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000137082	retained_intron		2	-1	12397885	1221
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000195084	processed_transcript		2	-1	12419288	908
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000124603	protein_coding		2	-1	12419410	850
ENSMUSG00000102625	TEC	Gm37672	ENSMUST00000192682	TEC		3	1	75619347	4014
ENSMUSG00000035713	protein_coding	Usp35	ENSMUST00000181651	processed_transcript		7	-1	97315994	2659
ENSMUSG00000051427	protein_coding	Ccdc157	ENSMUST00000093381	protein_coding	alternative2	11	-1	4160291	5015
ENSMUSG00000035713	protein_coding	Usp35	ENSMUST00000181351	retained_intron		7	-1	97315025	646
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000204895	retained_intron		6	1	83054646	1826
ENSMUSG00000035713	protein_coding	Usp35	ENSMUST00000180476	processed_transcript		7	-1	97315995	718
ENSMUSG00000106869	TEC	Gm42473	ENSMUST00000201056	TEC		5	1	115870144	2291
ENSMUSG00000051427	protein_coding	Ccdc157	ENSMUST00000137060	processed_transcript		11	-1	4147665	3885
ENSMUSG00000035713	protein_coding	Usp35	ENSMUST00000181354	retained_intron		7	-1	97324389	1167
ENSMUSG00000035713	protein_coding	Usp35	ENSMUST00000168435	protein_coding	principal1	7	-1	97325964	3982
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000205152	retained_intron		6	1	83054714	836
ENSMUSG00000051427	protein_coding	Ccdc157	ENSMUST00000139099	processed_transcript		11	-1	4160218	633
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000204385	retained_intron		6	1	83054729	1627
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000130225	retained_intron		2	-1	12419431	1324
ENSMUSG00000081394	processed_pseudogene	Gm13215	ENSMUST00000117559	processed_pseudogene		4	-1	132148884	472
ENSMUSG00000051427	protein_coding	Ccdc157	ENSMUST00000132712	processed_transcript		11	-1	4160252	401
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000195758	retained_intron		2	-1	12366181	1845
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000129993	protein_coding		2	-1	12419449	457
ENSMUSG00000106862	TEC	Gm42811	ENSMUST00000201951	TEC		6	-1	127810718	2768
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000195125	retained_intron		2	-1	12386781	836
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000204383	retained_intron		6	1	83054731	361
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000129348	protein_coding		2	-1	12410065	480
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000203915	nonsense_mediated_decay		6	1	83054731	1491
ENSMUSG00000051427	protein_coding	Ccdc157	ENSMUST00000133962	processed_transcript		11	-1	4160218	695
ENSMUSG00000024370	protein_coding	Cdc23	ENSMUST00000025228	protein_coding		18	-1	34651735	2084
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000130097	retained_intron		2	-1	12419441	1126
ENSMUSG00000020592	protein_coding	Sdc1	ENSMUST00000020911	protein_coding	principal1	12	1	8771323	3157
ENSMUSG00000107799	antisense	Gm38825	ENSMUST00000204022	antisense		6	-1	67239710	648
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000153690	retained_intron		2	-1	12410204	582
ENSMUSG00000108013	processed_pseudogene	Gm44052	ENSMUST00000203382	processed_pseudogene		6	-1	67222544	396
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000124515	protein_coding		2	-1	12419391	422
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000106017	protein_coding	principal3	4	1	129985164	5104
ENSMUSG00000111184	protein_coding	Gm49661	ENSMUST00000214133	protein_coding	principal1	8	-1	84969433	339
ENSMUSG00000024370	protein_coding	Cdc23	ENSMUST00000133181	protein_coding	principal1	18	-1	34651735	4133
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000204719	nonsense_mediated_decay		6	1	83054736	750
ENSMUSG00000027834	protein_coding	Serpini1	ENSMUST00000161776	protein_coding		3	1	75557547	779
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000151529	nonsense_mediated_decay		2	-1	12419249	468
ENSMUSG00000047905	processed_pseudogene	Gm8566	ENSMUST00000120174	processed_pseudogene		6	1	67205619	465
ENSMUSG00000020592	protein_coding	Sdc1	ENSMUST00000159821	retained_intron		12	1	8771324	855
ENSMUSG00000026767	protein_coding	Mindy3	ENSMUST00000154952	processed_transcript		2	-1	12404729	463
ENSMUSG00000104406	TEC	Gm38014	ENSMUST00000193349	TEC		2	-1	12392483	2612
ENSMUSG00000024370	protein_coding	Cdc23	ENSMUST00000138400	retained_intron		18	-1	34634630	725
ENSMUSG00000051427	protein_coding	Ccdc157	ENSMUST00000101626	protein_coding	principal3	11	-1	4160293	5153
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000204761	retained_intron		6	1	83054738	620
ENSMUSG00000033987	protein_coding	Dnah17	ENSMUST00000132685	protein_coding	alternative2	11	-1	118130634	13612
ENSMUSG00000118643	processed_transcript	AC163703.1	ENSMUST00000209372	processed_transcript		8	-1	84976542	492
ENSMUSG00000022636	protein_coding	Alcam	ENSMUST00000023312	protein_coding	principal3	16	-1	52454074	6036
ENSMUSG00000102630	TEC	Gm37289	ENSMUST00000195409	TEC		2	-1	12358496	1402
ENSMUSG00000104449	TEC	Gm37255	ENSMUST00000193302	TEC		2	-1	12375271	3060
ENSMUSG00000022636	protein_coding	Alcam	ENSMUST00000167115	protein_coding		16	-1	52296924	1621
ENSMUSG00000033987	protein_coding	Dnah17	ENSMUST00000217584	retained_intron		11	-1	118089194	762
ENSMUSG00000031870	protein_coding	Pgr	ENSMUST00000070463	protein_coding	principal1	9	1	8900468	3068
ENSMUSG00000052837	protein_coding	Junb	ENSMUST00000064922	protein_coding	principal1	8	-1	84978718	1809
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000204343	nonsense_mediated_decay		6	1	83054748	1265
ENSMUSG00000020592	protein_coding	Sdc1	ENSMUST00000161883	protein_coding		12	1	8771742	638
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000203180	retained_intron		6	1	83054755	847
ENSMUSG00000033987	protein_coding	Dnah17	ENSMUST00000018719	processed_transcript		11	-1	118093702	1361
ENSMUSG00000031870	protein_coding	Pgr	ENSMUST00000098986	protein_coding		9	1	8900468	3068
ENSMUSG00000047554	protein_coding	Tmem41b	ENSMUST00000094097	protein_coding	principal1	7	-1	109986451	3840
ENSMUSG00000020592	protein_coding	Sdc1	ENSMUST00000160348	processed_transcript		12	1	8771803	342
ENSMUSG00000022636	protein_coding	Alcam	ENSMUST00000170035	protein_coding	alternative1	16	-1	52452465	1917
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000204209	retained_intron		6	1	83055391	520
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000205042	retained_intron		6	1	83055714	504
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000121049	protein_coding	alternative2	4	1	129985268	4871
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000203331	retained_intron		6	1	83056410	737
ENSMUSG00000022636	protein_coding	Alcam	ENSMUST00000163788	retained_intron		16	-1	52269061	439
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000204510	retained_intron		6	1	83056512	326
ENSMUSG00000024370	protein_coding	Cdc23	ENSMUST00000133162	retained_intron		18	-1	34651718	2031
ENSMUSG00000047554	protein_coding	Tmem41b	ENSMUST00000119929	protein_coding		7	-1	109986259	2346
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000106015	protein_coding	alternative2	4	1	129992068	4982
ENSMUSG00000096658	protein_coding	Vmn2r39	ENSMUST00000174388	protein_coding	principal1	7	-1	9030798	3646
ENSMUSG00000022636	protein_coding	Alcam	ENSMUST00000164888	retained_intron		16	-1	52271115	642
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000203123	retained_intron		6	1	83056848	546
ENSMUSG00000020592	protein_coding	Sdc1	ENSMUST00000171158	protein_coding	principal1	12	1	8771413	2311
ENSMUSG00000031870	protein_coding	Pgr	ENSMUST00000151080	retained_intron		9	1	8900419	3897
ENSMUSG00000022636	protein_coding	Alcam	ENSMUST00000164728	protein_coding		16	-1	52452465	1885
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000203749	retained_intron		6	1	83056853	545
ENSMUSG00000024370	protein_coding	Cdc23	ENSMUST00000155307	retained_intron		18	-1	34637871	672
ENSMUSG00000024370	protein_coding	Cdc23	ENSMUST00000136943	retained_intron		18	-1	34645319	681
ENSMUSG00000068328	protein_coding	Aup1	ENSMUST00000204752	retained_intron		6	1	83057221	456
ENSMUSG00000047554	protein_coding	Tmem41b	ENSMUST00000118429	protein_coding	principal1	7	-1	109986929	2774
ENSMUSG00000024370	protein_coding	Cdc23	ENSMUST00000151409	retained_intron		18	-1	34651718	517
ENSMUSG00000031870	protein_coding	Pgr	ENSMUST00000189181	protein_coding	principal1	9	1	8899833	6889
ENSMUSG00000024370	protein_coding	Cdc23	ENSMUST00000135208	retained_intron		18	-1	34651722	3935
ENSMUSG00000022636	protein_coding	Alcam	ENSMUST00000168071	protein_coding		16	-1	52452654	878
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000028806	protein_coding	principal3	2	1	131491764	2270
ENSMUSG00000100012	lincRNA	Gm29207	ENSMUST00000190931	lincRNA		Y	1	61196077	1493
ENSMUSG00000100012	lincRNA	Gm29207	ENSMUST00000186241	lincRNA		Y	1	61196530	431
ENSMUSG00000047554	protein_coding	Tmem41b	ENSMUST00000125703	retained_intron		7	-1	109978929	839
ENSMUSG00000027834	protein_coding	Serpini1	ENSMUST00000029423	protein_coding	principal1	3	1	75557547	4091
ENSMUSG00000092312	unprocessed_pseudogene	Zfp419	ENSMUST00000173446	unprocessed_pseudogene		7	-1	9062754	916
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000183575	nonsense_mediated_decay		2	1	131491923	782
ENSMUSG00000033987	protein_coding	Dnah17	ENSMUST00000084803	protein_coding	principal2	11	-1	118129219	14889
ENSMUSG00000118489	processed_pseudogene	AC099860.1	ENSMUST00000238965	processed_pseudogene		1	1	97660831	1444
ENSMUSG00000027834	protein_coding	Serpini1	ENSMUST00000195285	processed_transcript		3	1	75557561	612
ENSMUSG00000099836	lincRNA	Gm29204	ENSMUST00000187384	lincRNA		Y	1	61224998	1498
ENSMUSG00000047554	protein_coding	Tmem41b	ENSMUST00000154831	nonsense_mediated_decay		7	-1	109986162	668
ENSMUSG00000033987	protein_coding	Dnah17	ENSMUST00000106308	protein_coding	alternative2	11	-1	118129219	14973
ENSMUSG00000047554	protein_coding	Tmem41b	ENSMUST00000124821	nonsense_mediated_decay		7	-1	109986275	676
ENSMUSG00000099836	lincRNA	Gm29204	ENSMUST00000187054	lincRNA		Y	1	61225450	437
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000106018	protein_coding	alternative2	4	1	129992069	4470
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000147330	retained_intron		5	1	115845278	1671
ENSMUSG00000027834	protein_coding	Serpini1	ENSMUST00000161695	retained_intron		3	1	75557578	3187
ENSMUSG00000047554	protein_coding	Tmem41b	ENSMUST00000135565	nonsense_mediated_decay		7	-1	109986249	815
ENSMUSG00000091930	protein_coding	Vmn2r52	ENSMUST00000232927	protein_coding		7	-1	10176573	7896
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000097868	protein_coding	alternative2	4	1	129992069	4635
ENSMUSG00000018341	protein_coding	Il12rb2	ENSMUST00000117441	protein_coding		6	-1	67339694	2600
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000030571	protein_coding	alternative2	4	1	129992069	4734
ENSMUSG00000047554	protein_coding	Tmem41b	ENSMUST00000151587	retained_intron		7	-1	109986259	1544
ENSMUSG00000091930	protein_coding	Vmn2r52	ENSMUST00000164918	protein_coding	principal1	7	-1	10176573	8292
ENSMUSG00000047554	protein_coding	Tmem41b	ENSMUST00000207300	retained_intron		7	-1	109986287	884
ENSMUSG00000068855	protein_coding	H2ac20	ENSMUST00000090782	protein_coding	principal1	3	-1	96220880	520
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000149282	retained_intron		4	1	130009876	711
ENSMUSG00000099940	lincRNA	Gm29265	ENSMUST00000188697	lincRNA		Y	1	64411147	1499
ENSMUSG00000061048	protein_coding	Cdh3	ENSMUST00000080797	protein_coding	principal1	8	1	106510891	4384
ENSMUSG00000086159	lincRNA	Gm13025	ENSMUST00000141469	lincRNA		4	1	140679753	1163
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000106012	retained_intron		4	1	130010069	874
ENSMUSG00000099940	lincRNA	Gm29265	ENSMUST00000190290	lincRNA		Y	1	64411600	438
ENSMUSG00000118438	protein_coding	Btbd35f8	ENSMUST00000238270	protein_coding	principal1	X	1	34450459	1929
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000166118	retained_intron		4	1	130012201	283
ENSMUSG00000095773	protein_coding	Vmn2r38	ENSMUST00000108554	protein_coding	principal1	7	-1	9097881	3723
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000136416	retained_intron		4	1	130013636	355
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000163625	retained_intron		4	1	130018776	850
ENSMUSG00000068854	protein_coding	H2bc21	ENSMUST00000090781	protein_coding	principal1	3	1	96221119	2620
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000118169	protein_coding	principal1	7	1	128265676	2277
ENSMUSG00000028782	protein_coding	Adgrb2	ENSMUST00000136787	retained_intron		4	1	130021115	828
ENSMUSG00000029104	protein_coding	Htt	ENSMUST00000148953	retained_intron		5	1	34761740	4382
ENSMUSG00000018341	protein_coding	Il12rb2	ENSMUST00000018485	protein_coding	principal1	6	-1	67376188	2998
ENSMUSG00000003452	protein_coding	Bicd1	ENSMUST00000086829	protein_coding	principal2	6	1	149408984	9667
ENSMUSG00000026344	protein_coding	Lypd1	ENSMUST00000159417	protein_coding	principal1	1	-1	125912214	6464
ENSMUSG00000036622	protein_coding	Atp13a2	ENSMUST00000037055	protein_coding	principal3	4	1	140986873	3956
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000205720	nonsense_mediated_decay		7	1	128265678	1745
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000206909	protein_coding		7	1	128265683	778
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000204810	processed_transcript		6	1	67238176	397
ENSMUSG00000003452	protein_coding	Bicd1	ENSMUST00000111513	protein_coding		6	1	149409016	4049
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000142841	protein_coding		7	1	128265695	830
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000033045	protein_coding		7	1	128266300	940
ENSMUSG00000003452	protein_coding	Bicd1	ENSMUST00000130270	retained_intron		6	1	149409069	3998
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000153418	nonsense_mediated_decay		7	1	128266343	438
ENSMUSG00000073409	protein_coding	H2-Q6	ENSMUST00000174699	protein_coding	principal1	17	1	35424850	2085
ENSMUSG00000023806	protein_coding	Rsph3b	ENSMUST00000231794	protein_coding	alternative2	17	-1	6948682	2243
ENSMUSG00000026344	protein_coding	Lypd1	ENSMUST00000162899	protein_coding		1	-1	125911387	1511
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000136345	retained_intron		7	1	128266370	329
ENSMUSG00000023806	protein_coding	Rsph3b	ENSMUST00000232602	processed_transcript		17	-1	6948281	1263
ENSMUSG00000036622	protein_coding	Atp13a2	ENSMUST00000127833	protein_coding	alternative2	4	1	140986873	3882
ENSMUSG00000044768	protein_coding	D1Ertd622e	ENSMUST00000053033	protein_coding	principal1	1	-1	97662074	40378
ENSMUSG00000026344	protein_coding	Lypd1	ENSMUST00000027582	protein_coding		1	-1	125912928	1447
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000171335	retained_intron		7	1	128266958	771
ENSMUSG00000023806	protein_coding	Rsph3b	ENSMUST00000024572	protein_coding	principal2	17	-1	6948356	1614
ENSMUSG00000115730	processed_pseudogene	Gm7459	ENSMUST00000226624	processed_pseudogene		15	1	44281980	943
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000137038	nonsense_mediated_decay		7	1	128267391	510
ENSMUSG00000073409	protein_coding	H2-Q6	ENSMUST00000113879	protein_coding	principal1	17	1	35424877	981
ENSMUSG00000003452	protein_coding	Bicd1	ENSMUST00000003544	protein_coding	alternative1	6	1	149409429	2928
ENSMUSG00000026344	protein_coding	Lypd1	ENSMUST00000159529	protein_coding		1	-1	125910908	989
ENSMUSG00000112194	processed_pseudogene	Gm48029	ENSMUST00000218308	processed_pseudogene		5	-1	138412913	320
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000206716	protein_coding		7	1	128268953	1148
ENSMUSG00000003452	protein_coding	Bicd1	ENSMUST00000173408	nonsense_mediated_decay		6	1	149409429	2818
ENSMUSG00000084189	unprocessed_pseudogene	Gm8089	ENSMUST00000122463	unprocessed_pseudogene		1	-1	107302354	968
ENSMUSG00000026344	protein_coding	Lypd1	ENSMUST00000161361	protein_coding		1	-1	125913101	245
ENSMUSG00000115694	processed_pseudogene	Gm19235	ENSMUST00000228032	processed_pseudogene		15	1	44323112	1003
ENSMUSG00000030781	protein_coding	Slc5a2	ENSMUST00000206703	nonsense_mediated_decay		7	1	128270574	756
ENSMUSG00000003452	protein_coding	Bicd1	ENSMUST00000174886	retained_intron		6	1	149513830	621
ENSMUSG00000081058	protein_coding	H3c15	ENSMUST00000167403	protein_coding	principal1	3	-1	96239127	1020
ENSMUSG00000003452	protein_coding	Bicd1	ENSMUST00000172926	protein_coding		6	1	149516936	413
ENSMUSG00000044768	protein_coding	D1Ertd622e	ENSMUST00000153115	protein_coding	principal1	1	-1	97661676	3495
ENSMUSG00000003581	protein_coding	Rnf215	ENSMUST00000003677	protein_coding	principal1	11	1	4135202	1874
ENSMUSG00000026343	protein_coding	Gpr39	ENSMUST00000027581	protein_coding	principal1	1	1	125676995	2691
ENSMUSG00000044768	protein_coding	D1Ertd622e	ENSMUST00000149927	protein_coding	principal1	1	-1	97662074	2703
ENSMUSG00000003452	protein_coding	Bicd1	ENSMUST00000140759	retained_intron		6	1	149545882	6758
ENSMUSG00000084893	unprocessed_pseudogene	Hba-ps4	ENSMUST00000128900	unprocessed_pseudogene		17	-1	26287061	447
ENSMUSG00000082072	processed_pseudogene	Gm15785	ENSMUST00000119145	processed_pseudogene		6	-1	149434473	694
ENSMUSG00000084363	unprocessed_pseudogene	Gm2288	ENSMUST00000118560	unprocessed_pseudogene		X	-1	34893495	638
ENSMUSG00000026343	protein_coding	Gpr39	ENSMUST00000159359	processed_transcript		1	1	125840003	1128
ENSMUSG00000044768	protein_coding	D1Ertd622e	ENSMUST00000142234	protein_coding		1	-1	97661676	639
ENSMUSG00000117551	lincRNA	Gm50015	ENSMUST00000234840	lincRNA		17	-1	26322622	260
ENSMUSG00000003581	protein_coding	Rnf215	ENSMUST00000124670	protein_coding		11	1	4135282	446
ENSMUSG00000003581	protein_coding	Rnf215	ENSMUST00000145705	protein_coding		11	1	4135214	712
ENSMUSG00000100247	lincRNA	A530053M12Rik	ENSMUST00000187918	lincRNA		1	-1	106401987	1467
ENSMUSG00000020482	protein_coding	Ccdc117	ENSMUST00000020776	protein_coding	principal1	11	-1	5542187	3372
ENSMUSG00000052031	protein_coding	Tagap1	ENSMUST00000063683	protein_coding	principal1	17	-1	6961156	2312
ENSMUSG00000003581	protein_coding	Rnf215	ENSMUST00000127165	processed_transcript		11	1	4135502	722
ENSMUSG00000049758	protein_coding	Olfr1318	ENSMUST00000217533	protein_coding	principal1	2	1	112154372	3747
ENSMUSG00000116618	antisense	Gm49719	ENSMUST00000231833	antisense		17	1	6948446	667
ENSMUSG00000049758	protein_coding	Olfr1318	ENSMUST00000214063	protein_coding	principal1	2	1	112154371	3556
ENSMUSG00000049758	protein_coding	Olfr1318	ENSMUST00000215341	processed_transcript		2	1	112154198	3518
ENSMUSG00000093577	antisense	Gm20632	ENSMUST00000176760	antisense		3	1	96239393	2427
ENSMUSG00000049758	protein_coding	Olfr1318	ENSMUST00000216873	processed_transcript		2	1	112154347	3554
ENSMUSG00000063954	protein_coding	H2ac19	ENSMUST00000074976	protein_coding	principal1	3	-1	96240276	528
ENSMUSG00000100575	unprocessed_pseudogene	Gm21489	ENSMUST00000189668	unprocessed_pseudogene		Y	-1	61343815	818
ENSMUSG00000025162	protein_coding	Csnk1d	ENSMUST00000239115	protein_coding	alternative1	11	-1	120991330	1823
ENSMUSG00000049758	protein_coding	Olfr1318	ENSMUST00000058176	protein_coding	principal1	2	1	112155318	1690
ENSMUSG00000094185	processed_pseudogene	Gm5445	ENSMUST00000180224	processed_pseudogene		13	1	12378158	480
ENSMUSG00000092575	unprocessed_pseudogene	Gm5583	ENSMUST00000174328	unprocessed_pseudogene		7	-1	9131037	1519
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000159210	protein_coding		19	-1	45794299	383
ENSMUSG00000101676	unprocessed_pseudogene	Gm21832	ENSMUST00000186439	unprocessed_pseudogene		Y	-1	61385862	691
ENSMUSG00000097876	antisense	Gm16892	ENSMUST00000180999	antisense		16	1	57167401	1726
ENSMUSG00000101510	unprocessed_pseudogene	Gm21573	ENSMUST00000190112	unprocessed_pseudogene		Y	-1	61460715	691
ENSMUSG00000092620	unprocessed_pseudogene	Gm18201	ENSMUST00000174735	unprocessed_pseudogene		7	-1	9149393	875
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000113962	protein_coding		6	-1	83054442	1305
ENSMUSG00000092548	unprocessed_pseudogene	Vmn2r-ps41	ENSMUST00000173587	unprocessed_pseudogene		7	-1	9180099	980
ENSMUSG00000058267	protein_coding	Mrps14	ENSMUST00000078878	nonsense_mediated_decay		1	1	160195215	674
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000137952	protein_coding		5	1	115845280	571
ENSMUSG00000025162	protein_coding	Csnk1d	ENSMUST00000070575	protein_coding	alternative1	11	-1	120991092	3500
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000148245	protein_coding		5	1	115845281	651
ENSMUSG00000034413	protein_coding	Neurl1b	ENSMUST00000182897	protein_coding		17	1	26414829	1231
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000146387	retained_intron		5	1	115845644	2335
ENSMUSG00000025162	protein_coding	Csnk1d	ENSMUST00000018274	protein_coding	principal4	11	-1	120991330	3675
ENSMUSG00000099393	transcribed_processed_pseudogene	Gm28179	ENSMUST00000189029	processed_transcript		Y	-1	61489888	327
ENSMUSG00000014959	protein_coding	Gorasp2	ENSMUST00000112201	protein_coding	alternative2	2	1	70661576	2417
ENSMUSG00000036622	protein_coding	Atp13a2	ENSMUST00000151517	retained_intron		4	1	140986900	4266
ENSMUSG00000055980	protein_coding	Irs1	ENSMUST00000069799	protein_coding	principal1	1	-1	82291416	9144
ENSMUSG00000099393	transcribed_processed_pseudogene	Gm28179	ENSMUST00000191382	processed_transcript		Y	-1	61491872	544
ENSMUSG00000059336	protein_coding	Slc14a1	ENSMUST00000091813	protein_coding	principal3	18	-1	78123426	3665
ENSMUSG00000034413	protein_coding	Neurl1b	ENSMUST00000183077	protein_coding		17	1	26414829	1084
ENSMUSG00000099393	transcribed_processed_pseudogene	Gm28179	ENSMUST00000188365	transcribed_processed_pseudogene		Y	-1	61490325	613
ENSMUSG00000036622	protein_coding	Atp13a2	ENSMUST00000125797	retained_intron		4	1	140986990	2469
ENSMUSG00000025162	protein_coding	Csnk1d	ENSMUST00000131375	processed_transcript		11	-1	120965686	425
ENSMUSG00000003531	protein_coding	Dgcr6	ENSMUST00000143343	protein_coding		16	1	18052860	1280
ENSMUSG00000036622	protein_coding	Atp13a2	ENSMUST00000156995	processed_transcript		4	1	140995602	807
ENSMUSG00000025162	protein_coding	Csnk1d	ENSMUST00000141071	processed_transcript		11	-1	120971625	1069
ENSMUSG00000036622	protein_coding	Atp13a2	ENSMUST00000135117	processed_transcript		4	1	140996212	927
ENSMUSG00000103275	unprocessed_pseudogene	Gm36983	ENSMUST00000192280	unprocessed_pseudogene		3	1	23072419	1102
ENSMUSG00000025162	protein_coding	Csnk1d	ENSMUST00000139267	processed_transcript		11	-1	120968061	192
ENSMUSG00000058267	protein_coding	Mrps14	ENSMUST00000135680	protein_coding	principal1	1	1	160195215	2999
ENSMUSG00000003531	protein_coding	Dgcr6	ENSMUST00000148521	processed_transcript		16	1	18052876	919
ENSMUSG00000036622	protein_coding	Atp13a2	ENSMUST00000170797	processed_transcript		4	1	141000711	366
ENSMUSG00000115594	processed_pseudogene	Gm46497	ENSMUST00000227442	processed_pseudogene		15	1	12286669	455
ENSMUSG00000025162	protein_coding	Csnk1d	ENSMUST00000154483	protein_coding		11	-1	120990871	655
ENSMUSG00000055553	protein_coding	Kxd1	ENSMUST00000121623	protein_coding	principal1	8	-1	70523163	884
ENSMUSG00000003531	protein_coding	Dgcr6	ENSMUST00000148372	processed_transcript		16	1	18052892	926
ENSMUSG00000103607	lincRNA	Gm37021	ENSMUST00000195835	lincRNA		3	1	23085975	663
ENSMUSG00000036622	protein_coding	Atp13a2	ENSMUST00000137630	retained_intron		4	1	141004417	877
ENSMUSG00000025162	protein_coding	Csnk1d	ENSMUST00000146837	nonsense_mediated_decay		11	-1	120990987	689
ENSMUSG00000105806	processed_pseudogene	Gm43345	ENSMUST00000199484	processed_pseudogene		3	-1	27308674	269
ENSMUSG00000003531	protein_coding	Dgcr6	ENSMUST00000151266	protein_coding	alternative1	16	1	18066403	1086
ENSMUSG00000058267	protein_coding	Mrps14	ENSMUST00000097193	protein_coding		1	1	160195303	787
ENSMUSG00000055553	protein_coding	Kxd1	ENSMUST00000138260	protein_coding		8	-1	70527956	917
ENSMUSG00000034413	protein_coding	Neurl1b	ENSMUST00000053020	protein_coding	principal1	17	1	26414965	6195
ENSMUSG00000025162	protein_coding	Csnk1d	ENSMUST00000155070	retained_intron		11	-1	120991051	604
ENSMUSG00000099604	processed_pseudogene	Gm6651	ENSMUST00000189471	processed_pseudogene		1	1	106439600	271
ENSMUSG00000066828	protein_coding	Vmn2r37	ENSMUST00000072787	protein_coding	principal1	7	-1	9223653	3081
ENSMUSG00000100404	unprocessed_pseudogene	Gm21577	ENSMUST00000190823	unprocessed_pseudogene		Y	-1	61527279	697
ENSMUSG00000087491	lincRNA	Gm14552	ENSMUST00000146614	lincRNA		X	-1	35009202	2010
ENSMUSG00000087491	lincRNA	Gm14552	ENSMUST00000126906	lincRNA		X	-1	35009236	2098
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000089645	protein_coding	principal2	6	-1	83054571	1725
ENSMUSG00000087491	lincRNA	Gm14552	ENSMUST00000144163	lincRNA		X	-1	35009265	1776
ENSMUSG00000023191	protein_coding	P3h3	ENSMUST00000023958	protein_coding	principal1	6	-1	124857752	2850
ENSMUSG00000059336	protein_coding	Slc14a1	ENSMUST00000160292	protein_coding	alternative2	18	-1	78123331	2217
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000113963	protein_coding		6	-1	83054571	1629
ENSMUSG00000014959	protein_coding	Gorasp2	ENSMUST00000028509	protein_coding	principal2	2	1	70661576	2238
ENSMUSG00000101353	lincRNA	Gm29203	ENSMUST00000187355	lincRNA		Y	1	61577303	1495
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000183947	nonsense_mediated_decay		2	1	131491943	1437
ENSMUSG00000055553	protein_coding	Kxd1	ENSMUST00000093456	protein_coding		8	-1	70523180	1216
ENSMUSG00000003531	protein_coding	Dgcr6	ENSMUST00000066027	protein_coding	principal4	16	1	18066443	1050
ENSMUSG00000101353	lincRNA	Gm29203	ENSMUST00000188836	lincRNA		Y	1	61577756	438
ENSMUSG00000059336	protein_coding	Slc14a1	ENSMUST00000160639	protein_coding	principal3	18	-1	78142119	2047
ENSMUSG00000099865	lincRNA	Gm29206	ENSMUST00000189321	lincRNA		Y	-1	61583931	827
ENSMUSG00000003531	protein_coding	Dgcr6	ENSMUST00000155387	protein_coding		16	1	18066448	1415
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000122955	nonsense_mediated_decay		6	-1	83054571	1605
ENSMUSG00000041408	protein_coding	Wapl	ENSMUST00000048263	protein_coding	principal3	14	1	34673928	6351
ENSMUSG00000055553	protein_coding	Kxd1	ENSMUST00000118850	protein_coding		8	-1	70523279	992
ENSMUSG00000014959	protein_coding	Gorasp2	ENSMUST00000112205	protein_coding	alternative2	2	1	70661590	1196
ENSMUSG00000092561	unprocessed_pseudogene	Gm4011	ENSMUST00000174657	unprocessed_pseudogene		7	-1	9260423	2555
ENSMUSG00000014959	protein_coding	Gorasp2	ENSMUST00000136485	processed_transcript		2	1	70687813	1844
ENSMUSG00000055553	protein_coding	Kxd1	ENSMUST00000155677	nonsense_mediated_decay		8	-1	70523180	639
ENSMUSG00000003531	protein_coding	Dgcr6	ENSMUST00000153123	protein_coding		16	1	18069480	641
ENSMUSG00000055553	protein_coding	Kxd1	ENSMUST00000117580	protein_coding		8	-1	70527956	696
ENSMUSG00000041408	protein_coding	Wapl	ENSMUST00000090027	protein_coding	alternative2	14	1	34674173	4185
ENSMUSG00000055553	protein_coding	Kxd1	ENSMUST00000137610	protein_coding		8	-1	70523090	424
ENSMUSG00000014959	protein_coding	Gorasp2	ENSMUST00000130970	processed_transcript		2	1	70662200	303
ENSMUSG00000003531	protein_coding	Dgcr6	ENSMUST00000076757	protein_coding		16	1	18065159	894
ENSMUSG00000014959	protein_coding	Gorasp2	ENSMUST00000133432	protein_coding	alternative2	2	1	70661576	1941
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000154829	retained_intron		6	-1	83055273	2512
ENSMUSG00000055553	protein_coding	Kxd1	ENSMUST00000132867	protein_coding		8	-1	70527783	436
ENSMUSG00000097025	antisense	Gm26558	ENSMUST00000238702	antisense		2	-1	70662109	961
ENSMUSG00000055553	protein_coding	Kxd1	ENSMUST00000138586	retained_intron		8	-1	70523104	1033
ENSMUSG00000097025	antisense	Gm26558	ENSMUST00000180559	antisense		2	-1	70662108	861
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000132099	nonsense_mediated_decay		6	-1	83053686	745
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000134606	protein_coding	alternative2	6	-1	83053837	883
ENSMUSG00000003526	protein_coding	Prodh	ENSMUST00000139861	protein_coding		16	-1	18089163	677
ENSMUSG00000073176	protein_coding	Zfp449	ENSMUST00000101560	protein_coding	principal1	X	1	56346400	3738
ENSMUSG00000087399	antisense	Gm11899	ENSMUST00000142373	antisense		4	1	24792680	745
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000144058	retained_intron		6	-1	83053837	1108
ENSMUSG00000085227	antisense	6330418K02Rik	ENSMUST00000124298	antisense		5	1	138264043	743
ENSMUSG00000041408	protein_coding	Wapl	ENSMUST00000111895	processed_transcript		14	1	34694337	2688
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000110179	protein_coding		2	1	131491943	1320
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000150217	protein_coding		6	-1	83054037	746
ENSMUSG00000023191	protein_coding	P3h3	ENSMUST00000135127	nonsense_mediated_decay		6	-1	124857729	2901
ENSMUSG00000041408	protein_coding	Wapl	ENSMUST00000172658	processed_transcript		14	1	34709080	382
ENSMUSG00000085227	antisense	6330418K02Rik	ENSMUST00000141454	antisense		5	1	138264054	624
ENSMUSG00000041408	protein_coding	Wapl	ENSMUST00000151285	protein_coding		14	1	34725990	1820
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000151627	retained_intron		2	1	131491943	2223
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000204281	processed_transcript		6	-1	83055165	768
ENSMUSG00000041408	protein_coding	Wapl	ENSMUST00000174559	protein_coding		14	1	34737271	479
ENSMUSG00000023191	protein_coding	P3h3	ENSMUST00000126987	retained_intron		6	-1	124842611	886
ENSMUSG00000068329	protein_coding	Htra2	ENSMUST00000203339	processed_transcript		6	-1	83053885	650
ENSMUSG00000085227	antisense	6330418K02Rik	ENSMUST00000125662	antisense		5	1	138264069	1267
ENSMUSG00000083085	unprocessed_pseudogene	Gm12765	ENSMUST00000117273	unprocessed_pseudogene		7	1	33937261	615
ENSMUSG00000023191	protein_coding	P3h3	ENSMUST00000147296	retained_intron		6	-1	124850993	637
ENSMUSG00000085227	antisense	6330418K02Rik	ENSMUST00000144460	antisense		5	1	138264108	519
ENSMUSG00000041408	protein_coding	Wapl	ENSMUST00000169910	protein_coding	principal3	14	1	34674122	4066
ENSMUSG00000003526	protein_coding	Prodh	ENSMUST00000123969	processed_transcript		16	-1	18082319	2043
ENSMUSG00000085227	antisense	6330418K02Rik	ENSMUST00000138911	antisense		5	1	138265544	421
ENSMUSG00000023191	protein_coding	P3h3	ENSMUST00000149870	retained_intron		6	-1	124854924	714
ENSMUSG00000108874	processed_pseudogene	Gm9711	ENSMUST00000208857	processed_pseudogene		7	1	144791996	327
ENSMUSG00000067199	protein_coding	Frat1	ENSMUST00000087155	protein_coding	principal1	19	1	41829970	2614
ENSMUSG00000002814	protein_coding	Top3a	ENSMUST00000002891	protein_coding	principal2	11	-1	60777365	3741
ENSMUSG00000023191	protein_coding	P3h3	ENSMUST00000129225	retained_intron		6	-1	124854827	880
ENSMUSG00000023191	protein_coding	P3h3	ENSMUST00000135546	retained_intron		6	-1	124855170	674
ENSMUSG00000117443	lincRNA	Gm50046	ENSMUST00000234135	lincRNA		17	-1	32754198	454
ENSMUSG00000047604	protein_coding	Frat2	ENSMUST00000059231	protein_coding	principal1	19	-1	41848132	2161
ENSMUSG00000117581	processed_pseudogene	Gm17948	ENSMUST00000235016	processed_pseudogene		17	1	32745182	639
ENSMUSG00000054850	protein_coding	Smim10l2a	ENSMUST00000068106	protein_coding	principal1	X	1	56374586	2393
ENSMUSG00000117651	processed_pseudogene	Gm6452	ENSMUST00000233998	processed_pseudogene		17	1	32731010	797
ENSMUSG00000097288	antisense	Gm2155	ENSMUST00000181581	antisense		X	-1	56374790	1974
ENSMUSG00000002814	protein_coding	Top3a	ENSMUST00000117743	protein_coding		11	-1	60777287	2932
ENSMUSG00000081620	processed_pseudogene	Gm14633	ENSMUST00000121152	processed_pseudogene		X	-1	56448357	470
ENSMUSG00000002814	protein_coding	Top3a	ENSMUST00000102668	protein_coding	alternative2	11	-1	60777265	3542
ENSMUSG00000066586	protein_coding	Scgb2b26	ENSMUST00000085623	protein_coding	principal1	7	-1	33945040	579
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000110189	protein_coding		2	1	131491943	1919
ENSMUSG00000002814	protein_coding	Top3a	ENSMUST00000120417	protein_coding		11	-1	60777264	2318
ENSMUSG00000109179	protein_coding	Gm35339	ENSMUST00000208833	protein_coding	principal1	15	1	76354432	6581
ENSMUSG00000031074	protein_coding	Fgf3	ENSMUST00000155320	protein_coding		7	1	144838083	599
ENSMUSG00000083942	unprocessed_pseudogene	Scgb1b26-ps	ENSMUST00000121845	unprocessed_pseudogene		7	1	33958805	291
ENSMUSG00000002814	protein_coding	Top3a	ENSMUST00000124799	retained_intron		11	-1	60752678	737
ENSMUSG00000101159	processed_pseudogene	Gm28184	ENSMUST00000187862	processed_pseudogene		7	1	33986311	67
ENSMUSG00000052926	protein_coding	Rnaseh2a	ENSMUST00000109736	protein_coding	principal1	8	-1	84969740	2981
ENSMUSG00000081962	processed_pseudogene	Gm12773	ENSMUST00000120134	processed_pseudogene		7	1	33996999	587
ENSMUSG00000040728	protein_coding	Esrp1	ENSMUST00000043781	protein_coding	alternative1	4	-1	11386679	3743
ENSMUSG00000081768	unprocessed_pseudogene	Gm12755	ENSMUST00000122297	unprocessed_pseudogene		7	1	33998012	282
ENSMUSG00000002814	protein_coding	Top3a	ENSMUST00000130068	protein_coding		11	-1	60777299	413
ENSMUSG00000052926	protein_coding	Rnaseh2a	ENSMUST00000065049	protein_coding		8	-1	84966041	1006
ENSMUSG00000031074	protein_coding	Fgf3	ENSMUST00000105898	protein_coding	principal1	7	1	144838595	2299
ENSMUSG00000040728	protein_coding	Esrp1	ENSMUST00000108313	protein_coding	alternative1	4	-1	11386783	3696
ENSMUSG00000040728	protein_coding	Esrp1	ENSMUST00000147342	protein_coding		4	-1	11367178	1892
ENSMUSG00000099656	processed_pseudogene	Gm18667	ENSMUST00000186523	processed_pseudogene		1	1	138184101	484
ENSMUSG00000052926	protein_coding	Rnaseh2a	ENSMUST00000128972	protein_coding		8	-1	84966064	1141
ENSMUSG00000040728	protein_coding	Esrp1	ENSMUST00000108310	protein_coding	alternative1	4	-1	11386679	2781
ENSMUSG00000040728	protein_coding	Esrp1	ENSMUST00000127399	processed_transcript		4	-1	11344245	391
ENSMUSG00000099459	lincRNA	Gm28556	ENSMUST00000187489	lincRNA		1	-1	138192127	673
ENSMUSG00000052926	protein_coding	Rnaseh2a	ENSMUST00000147812	protein_coding	principal1	8	-1	84969440	1532
ENSMUSG00000040728	protein_coding	Esrp1	ENSMUST00000155519	protein_coding		4	-1	11386394	3562
ENSMUSG00000021363	protein_coding	Mak	ENSMUST00000225084	protein_coding	alternative2	13	-1	41070469	3573
ENSMUSG00000052926	protein_coding	Rnaseh2a	ENSMUST00000126029	retained_intron		8	-1	84958116	338
ENSMUSG00000066584	protein_coding	Scgb2b27	ENSMUST00000085620	protein_coding	principal3	7	-1	34013876	512
ENSMUSG00000050917	protein_coding	Fgf4	ENSMUST00000208265	protein_coding		7	1	144847367	395
ENSMUSG00000040728	protein_coding	Esrp1	ENSMUST00000108311	protein_coding	principal3	4	-1	11386783	3864
ENSMUSG00000066584	protein_coding	Scgb2b27	ENSMUST00000141890	retained_intron		7	-1	34013942	1560
ENSMUSG00000052926	protein_coding	Rnaseh2a	ENSMUST00000122931	retained_intron		8	-1	84965961	829
ENSMUSG00000066584	protein_coding	Scgb2b27	ENSMUST00000185399	protein_coding	alternative2	7	-1	34013867	702
ENSMUSG00000021363	protein_coding	Mak	ENSMUST00000225789	retained_intron		13	-1	41079642	6815
ENSMUSG00000052926	protein_coding	Rnaseh2a	ENSMUST00000140561	protein_coding		8	-1	84969767	716
ENSMUSG00000074127	protein_coding	Cmtm2a	ENSMUST00000034344	protein_coding	principal2	8	-1	104293178	1081
ENSMUSG00000052926	protein_coding	Rnaseh2a	ENSMUST00000130902	protein_coding		8	-1	84966876	423
ENSMUSG00000022749	protein_coding	Tbc1d23	ENSMUST00000023431	protein_coding	principal2	16	-1	57231504	3690
ENSMUSG00000074127	protein_coding	Cmtm2a	ENSMUST00000212492	protein_coding	alternative2	8	-1	104293174	635
ENSMUSG00000052926	protein_coding	Rnaseh2a	ENSMUST00000137791	processed_transcript		8	-1	84969581	749
ENSMUSG00000050917	protein_coding	Fgf4	ENSMUST00000060336	protein_coding	principal1	7	1	144861386	3030
ENSMUSG00000074127	protein_coding	Cmtm2a	ENSMUST00000212487	non_stop_decay		8	-1	104293181	631
ENSMUSG00000052926	protein_coding	Rnaseh2a	ENSMUST00000109738	protein_coding	principal1	8	-1	84966011	2044
ENSMUSG00000022749	protein_coding	Tbc1d23	ENSMUST00000226586	protein_coding	alternative1	16	-1	57231366	3112
ENSMUSG00000022749	protein_coding	Tbc1d23	ENSMUST00000227681	processed_transcript		16	-1	57178256	490
ENSMUSG00000022749	protein_coding	Tbc1d23	ENSMUST00000226678	processed_transcript		16	-1	57182862	659
ENSMUSG00000090137	protein_coding	Uba52	ENSMUST00000140679	protein_coding	principal1	8	-1	70510350	697
ENSMUSG00000081046	processed_pseudogene	Gm12846	ENSMUST00000120431	processed_pseudogene		4	1	98664366	1373
ENSMUSG00000031876	protein_coding	Gm45711	ENSMUST00000162616	nonsense_mediated_decay	principal1	8	-1	104310081	1660
ENSMUSG00000022749	protein_coding	Tbc1d23	ENSMUST00000227531	retained_intron		16	-1	57182552	5302
ENSMUSG00000036948	protein_coding	Map11	ENSMUST00000048421	protein_coding	principal1	5	-1	138263994	2490
ENSMUSG00000022749	protein_coding	Tbc1d23	ENSMUST00000226486	retained_intron		16	-1	57183008	393
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000110182	protein_coding		2	1	131491943	985
ENSMUSG00000110430	protein_coding	Cmtm1	ENSMUST00000160596	protein_coding	alternative2	8	-1	104310032	1900
ENSMUSG00000022749	protein_coding	Tbc1d23	ENSMUST00000231391	processed_transcript		16	-1	57201233	451
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000057497	protein_coding	principal3	5	-1	136883121	2724
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000110183	protein_coding		2	1	131491943	1159
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000141796	processed_transcript		4	1	98395785	252
ENSMUSG00000110430	protein_coding	Cmtm1	ENSMUST00000159039	protein_coding	principal2	8	-1	104310145	1130
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000042990	protein_coding	principal3	6	1	67266624	15474
ENSMUSG00000022749	protein_coding	Tbc1d23	ENSMUST00000231435	processed_transcript		16	-1	57201172	458
ENSMUSG00000060550	protein_coding	H2-Q7	ENSMUST00000071951	protein_coding	principal2	17	1	35439155	1497
ENSMUSG00000021363	protein_coding	Mak	ENSMUST00000070193	protein_coding		13	-1	41079704	2937
ENSMUSG00000110430	protein_coding	Cmtm1	ENSMUST00000164175	protein_coding	alternative2	8	-1	104310054	979
ENSMUSG00000022749	protein_coding	Tbc1d23	ENSMUST00000228172	nonsense_mediated_decay		16	-1	57231373	729
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000110186	protein_coding	alternative1	2	1	131491943	2170
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000203436	protein_coding	alternative1	6	1	67266983	1667
ENSMUSG00000060550	protein_coding	H2-Q7	ENSMUST00000173788	retained_intron		17	1	35439207	4209
ENSMUSG00000021363	protein_coding	Mak	ENSMUST00000224740	protein_coding	alternative2	13	-1	41070459	2354
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000204944	retained_intron		6	1	67266988	2367
ENSMUSG00000060550	protein_coding	H2-Q7	ENSMUST00000173016	retained_intron		17	1	35442188	1233
ENSMUSG00000090137	protein_coding	Uba52	ENSMUST00000129909	protein_coding	principal1	8	-1	70510355	705
ENSMUSG00000089703	processed_pseudogene	Gm15833	ENSMUST00000161563	processed_pseudogene		1	1	44212162	957
ENSMUSG00000021363	protein_coding	Mak	ENSMUST00000225906	protein_coding		13	-1	41039771	514
ENSMUSG00000022749	protein_coding	Tbc1d23	ENSMUST00000227359	processed_transcript		16	-1	57231372	853
ENSMUSG00000021363	protein_coding	Mak	ENSMUST00000224423	protein_coding		13	-1	41079538	888
ENSMUSG00000036948	protein_coding	Map11	ENSMUST00000159649	protein_coding		5	-1	138263340	2093
ENSMUSG00000090137	protein_coding	Uba52	ENSMUST00000125184	protein_coding	principal1	8	-1	70510581	711
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000205106	protein_coding		6	1	67267005	1288
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000111103	protein_coding	alternative1	5	-1	136883184	2781
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000110188	protein_coding		2	1	131491943	1991
ENSMUSG00000090137	protein_coding	Uba52	ENSMUST00000127793	retained_intron		8	-1	70510379	646
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000204293	protein_coding	alternative1	6	1	67267010	1336
ENSMUSG00000021363	protein_coding	Mak	ENSMUST00000165087	protein_coding	alternative2	13	-1	41079706	3562
ENSMUSG00000036948	protein_coding	Map11	ENSMUST00000159123	nonsense_mediated_decay		5	-1	138263990	2189
ENSMUSG00000090137	protein_coding	Uba52	ENSMUST00000081940	protein_coding	principal1	8	-1	70510417	541
ENSMUSG00000060550	protein_coding	H2-Q7	ENSMUST00000116598	protein_coding		17	1	35439155	1134
ENSMUSG00000021363	protein_coding	Mak	ENSMUST00000021792	protein_coding	principal3	13	-1	41070465	3385
ENSMUSG00000036948	protein_coding	Map11	ENSMUST00000159534	retained_intron		5	-1	138264033	3566
ENSMUSG00000090137	protein_coding	Uba52	ENSMUST00000135446	protein_coding	principal1	8	-1	70510801	520
ENSMUSG00000060550	protein_coding	H2-Q7	ENSMUST00000078205	protein_coding		17	1	35439155	1419
ENSMUSG00000025782	protein_coding	Taf3	ENSMUST00000114909	protein_coding		2	-1	9953657	4897
ENSMUSG00000036948	protein_coding	Map11	ENSMUST00000159146	protein_coding		5	-1	138260945	482
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000141744	retained_intron		5	-1	136744549	839
ENSMUSG00000046828	protein_coding	Mettl21e	ENSMUST00000054801	protein_coding	principal1	1	-1	44218961	3211
ENSMUSG00000036948	protein_coding	Map11	ENSMUST00000162632	retained_intron		5	-1	138262194	340
ENSMUSG00000090137	protein_coding	Uba52	ENSMUST00000124967	protein_coding		8	-1	70509945	611
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000125061	retained_intron		5	-1	136747701	899
ENSMUSG00000090137	protein_coding	Uba52	ENSMUST00000165126	protein_coding	principal1	8	-1	70509623	387
ENSMUSG00000025782	protein_coding	Taf3	ENSMUST00000129720	processed_transcript		2	-1	9941751	2217
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000203167	retained_intron		6	1	67267011	1928
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000046863	protein_coding	principal1	7	1	127800604	1828
ENSMUSG00000036948	protein_coding	Map11	ENSMUST00000159872	retained_intron		5	-1	138263138	790
ENSMUSG00000046828	protein_coding	Mettl21e	ENSMUST00000150062	retained_intron		1	-1	44218913	1558
ENSMUSG00000084855	processed_pseudogene	Gm9850	ENSMUST00000117916	processed_pseudogene		5	1	108002260	227
ENSMUSG00000100966	processed_pseudogene	Gm5700	ENSMUST00000191483	processed_pseudogene		1	-1	44331036	989
ENSMUSG00000040387	protein_coding	Klhl32	ENSMUST00000108214	protein_coding		4	-1	24800890	5970
ENSMUSG00000060550	protein_coding	H2-Q7	ENSMUST00000076256	protein_coding	alternative2	17	1	35439155	1523
ENSMUSG00000100769	processed_transcript	Gm28893	ENSMUST00000190951	processed_transcript		1	1	44392809	1108
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000110181	protein_coding		2	1	131491964	2299
ENSMUSG00000101567	processed_pseudogene	Txn-ps1	ENSMUST00000186385	processed_pseudogene		1	-1	44464231	309
ENSMUSG00000096920	processed_pseudogene	Rps19-ps8	ENSMUST00000180714	processed_pseudogene		5	-1	108055916	422
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000205091	nonsense_mediated_decay		6	1	67267011	1166
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000203077	protein_coding	alternative1	6	1	67267011	1617
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000156962	retained_intron		5	-1	136882910	1988
ENSMUSG00000110642	unprocessed_pseudogene	Gm45710	ENSMUST00000212847	unprocessed_pseudogene		8	-1	104312769	215
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000203054	retained_intron		6	1	67267016	3153
ENSMUSG00000024565	protein_coding	Sall3	ENSMUST00000057950	protein_coding		18	-1	80986771	7079
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000147083	retained_intron		5	-1	136755392	578
ENSMUSG00000036898	protein_coding	Zfp157	ENSMUST00000085856	protein_coding	principal1	5	1	138441468	5312
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000153127	retained_intron		5	-1	136883209	949
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000203233	nonsense_mediated_decay		6	1	67267038	600
ENSMUSG00000024565	protein_coding	Sall3	ENSMUST00000238808	protein_coding	principal1	18	-1	80986536	4214
ENSMUSG00000064220	protein_coding	H2ac18	ENSMUST00000078756	protein_coding	principal1	3	1	96245497	586
ENSMUSG00000036898	protein_coding	Zfp157	ENSMUST00000137711	retained_intron		5	1	138441479	3556
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000204294	protein_coding		6	1	67267071	717
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000126311	processed_transcript		5	-1	136773046	280
ENSMUSG00000024565	protein_coding	Sall3	ENSMUST00000235746	retained_intron		18	-1	80975031	4254
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000173496	processed_transcript		5	-1	136882743	426
ENSMUSG00000082768	processed_pseudogene	Gm12727	ENSMUST00000119885	processed_pseudogene		4	1	106098924	359
ENSMUSG00000036898	protein_coding	Zfp157	ENSMUST00000134706	retained_intron		5	1	138441507	2841
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000196053	retained_intron		5	-1	136838309	2502
ENSMUSG00000093769	protein_coding	H3c14	ENSMUST00000176059	protein_coding	principal1	3	1	96246685	1820
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000203402	retained_intron		6	1	67267079	836
ENSMUSG00000004415	protein_coding	Col26a1	ENSMUST00000140245	retained_intron		5	-1	136882930	368
ENSMUSG00000034320	protein_coding	Slc26a2	ENSMUST00000146409	protein_coding	principal1	18	-1	61211612	7814
ENSMUSG00000085790	lincRNA	Gm12729	ENSMUST00000130088	lincRNA		4	-1	106105068	624
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000204034	protein_coding		6	1	67267257	558
ENSMUSG00000036898	protein_coding	Zfp157	ENSMUST00000151095	retained_intron		5	1	138441511	932
ENSMUSG00000098720	lincRNA	Gm27239	ENSMUST00000184638	lincRNA		18	1	80987456	642
ENSMUSG00000036898	protein_coding	Zfp157	ENSMUST00000110912	protein_coding		5	1	138441519	886
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000204135	nonsense_mediated_decay		6	1	67267330	612
ENSMUSG00000019471	protein_coding	Cdc37	ENSMUST00000019615	protein_coding	principal1	9	-1	21149982	7851
ENSMUSG00000093769	protein_coding	H3c14	ENSMUST00000177796	protein_coding		3	1	96246685	1825
ENSMUSG00000081189	processed_pseudogene	Hspd1-ps4	ENSMUST00000121815	processed_pseudogene		4	-1	106137778	1668
ENSMUSG00000036898	protein_coding	Zfp157	ENSMUST00000100524	protein_coding		5	1	138441540	869
ENSMUSG00000034320	protein_coding	Slc26a2	ENSMUST00000037603	protein_coding		18	-1	61200369	2802
ENSMUSG00000036371	protein_coding	Serbp1	ENSMUST00000204206	retained_intron		6	1	67271879	665
ENSMUSG00000070392	processed_transcript	Gm20634	ENSMUST00000090779	processed_transcript		3	1	96245554	2956
ENSMUSG00000040387	protein_coding	Klhl32	ENSMUST00000108218	protein_coding	principal1	4	-1	24851124	7143
ENSMUSG00000118235	processed_pseudogene	Gm7503	ENSMUST00000236431	processed_pseudogene		18	-1	80997383	381
ENSMUSG00000118268	lincRNA	Gm50424	ENSMUST00000237569	lincRNA		18	1	81046824	523
ENSMUSG00000108292	processed_pseudogene	Gm44050	ENSMUST00000204263	processed_pseudogene		6	-1	67252928	527
ENSMUSG00000034320	protein_coding	Slc26a2	ENSMUST00000148829	protein_coding		18	-1	61211380	1101
ENSMUSG00000093553	antisense	Gm20633	ENSMUST00000176742	antisense		3	-1	96246380	2831
ENSMUSG00000034320	protein_coding	Slc26a2	ENSMUST00000181997	retained_intron		18	-1	61211357	4168
ENSMUSG00000086249	processed_transcript	Gm12724	ENSMUST00000140196	processed_transcript		4	1	106241216	665
ENSMUSG00000055805	protein_coding	Fmnl1	ENSMUST00000042286	protein_coding	principal4	11	1	103171107	3806
ENSMUSG00000082958	processed_pseudogene	Gm12731	ENSMUST00000120932	processed_pseudogene		4	1	106257031	268
ENSMUSG00000019471	protein_coding	Cdc37	ENSMUST00000215296	protein_coding		9	-1	21149942	1144
ENSMUSG00000092278	processed_pseudogene	Gm8752	ENSMUST00000173427	processed_pseudogene		17	1	35445856	1694
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000110180	protein_coding		2	1	131491993	1617
ENSMUSG00000118262	lincRNA	Gm50423	ENSMUST00000237649	lincRNA		18	1	81083064	781
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000042035	protein_coding	principal1	15	1	74516195	6228
ENSMUSG00000055805	protein_coding	Fmnl1	ENSMUST00000218163	protein_coding	alternative2	11	1	103171107	3824
ENSMUSG00000035049	protein_coding	Rrp12	ENSMUST00000038677	protein_coding	principal1	19	-1	41896173	4340
ENSMUSG00000019471	protein_coding	Cdc37	ENSMUST00000215866	retained_intron		9	-1	21143194	792
ENSMUSG00000101655	lincRNA	2310040G24Rik	ENSMUST00000188135	lincRNA		6	-1	86488204	527
ENSMUSG00000025782	protein_coding	Taf3	ENSMUST00000026888	protein_coding	principal1	2	-1	10048596	4792
ENSMUSG00000093507	processed_transcript	Gm20627	ENSMUST00000176275	lincRNA		3	-1	96256277	564
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000131698	protein_coding		2	1	131492264	414
ENSMUSG00000102822	TEC	1700113B19Rik	ENSMUST00000191817	TEC		1	1	138261642	420
ENSMUSG00000093507	processed_transcript	Gm20627	ENSMUST00000176143	retained_intron		3	-1	96255469	849
ENSMUSG00000040387	protein_coding	Klhl32	ENSMUST00000150920	nonsense_mediated_decay		4	-1	24743965	2519
ENSMUSG00000040387	protein_coding	Klhl32	ENSMUST00000140652	nonsense_mediated_decay		4	-1	24850931	2506
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000149180	processed_transcript		2	1	131508952	326
ENSMUSG00000040387	protein_coding	Klhl32	ENSMUST00000108213	retained_intron		4	-1	24850931	1848
ENSMUSG00000040387	protein_coding	Klhl32	ENSMUST00000144062	processed_transcript		4	-1	24675427	700
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000132702	retained_intron		7	1	127800604	1899
ENSMUSG00000108977	antisense	Gm39119	ENSMUST00000208466	antisense		7	-1	144910085	951
ENSMUSG00000048138	protein_coding	Dmrt2	ENSMUST00000053068	protein_coding	principal1	19	1	25672411	2337
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000144748	retained_intron		7	1	127800604	2286
ENSMUSG00000025782	protein_coding	Taf3	ENSMUST00000114906	protein_coding		2	-1	9918834	583
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000183881	nonsense_mediated_decay		2	1	131520186	471
ENSMUSG00000101655	lincRNA	2310040G24Rik	ENSMUST00000189386	lincRNA		6	-1	86488227	775
ENSMUSG00000096999	antisense	Gm26793	ENSMUST00000180930	antisense		7	-1	144897461	2732
ENSMUSG00000031073	protein_coding	Fgf15	ENSMUST00000207040	retained_intron		7	1	144896531	1753
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000235485	protein_coding	principal2	19	-1	46338620	1790
ENSMUSG00000055805	protein_coding	Fmnl1	ENSMUST00000107027	protein_coding	alternative2	11	1	103171313	3693
ENSMUSG00000025782	protein_coding	Taf3	ENSMUST00000114907	protein_coding		2	-1	9918408	695
ENSMUSG00000040387	protein_coding	Klhl32	ENSMUST00000084781	protein_coding		4	-1	24851086	2287
ENSMUSG00000027333	protein_coding	Smox	ENSMUST00000151143	retained_intron		2	1	131521899	720
ENSMUSG00000097181	lincRNA	4930594M17Rik	ENSMUST00000181204	lincRNA		18	-1	81236066	1033
ENSMUSG00000103570	TEC	C630004M23Rik	ENSMUST00000194765	TEC		2	1	10047838	1682
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000206674	protein_coding		7	1	127800614	531
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000106272	protein_coding		7	1	127800614	1725
ENSMUSG00000087051	lincRNA	Gm12730	ENSMUST00000125277	lincRNA		4	1	106291269	291
ENSMUSG00000103906	protein_coding	Tigd5	ENSMUST00000192937	protein_coding	principal1	15	1	75909735	4801
ENSMUSG00000104192	TEC	Gm37253	ENSMUST00000195679	TEC		4	-1	106294393	562
ENSMUSG00000117717	lincRNA	Gm30192	ENSMUST00000237851	lincRNA		18	1	81264691	1485
ENSMUSG00000117717	lincRNA	Gm30192	ENSMUST00000236674	lincRNA		18	1	81264708	1942
ENSMUSG00000112806	TEC	Gm48146	ENSMUST00000218355	TEC		10	-1	62783187	1431
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000125188	protein_coding		7	1	127800636	473
ENSMUSG00000112173	processed_pseudogene	Gm48145	ENSMUST00000219925	processed_pseudogene		10	1	62761751	329
ENSMUSG00000082051	processed_pseudogene	Gm16072	ENSMUST00000119574	processed_pseudogene		18	1	12287404	2377
ENSMUSG00000075534	antisense	Gm13262	ENSMUST00000149014	antisense		2	1	9906178	2022
ENSMUSG00000107876	lincRNA	Gm43936	ENSMUST00000203987	lincRNA		6	-1	86493909	490
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000155005	nonsense_mediated_decay		7	1	127800646	710
ENSMUSG00000031527	protein_coding	Eri1	ENSMUST00000033927	protein_coding	principal1	8	-1	35495533	5079
ENSMUSG00000035852	protein_coding	Misp	ENSMUST00000169041	protein_coding	principal1	10	1	79820989	2497
ENSMUSG00000031073	protein_coding	Fgf15	ENSMUST00000033389	protein_coding	principal1	7	1	144896531	1810
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000206995	retained_intron		7	1	127800647	1000
ENSMUSG00000055805	protein_coding	Fmnl1	ENSMUST00000126425	processed_transcript		11	1	103180747	805
ENSMUSG00000031527	protein_coding	Eri1	ENSMUST00000211536	retained_intron		8	-1	35481408	3253
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000110748	protein_coding	principal1	12	1	44328886	6275
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000124631	retained_intron		7	1	127800658	782
ENSMUSG00000055805	protein_coding	Fmnl1	ENSMUST00000154871	processed_transcript		11	1	103185228	829
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000193426	protein_coding		10	1	13060504	1237
ENSMUSG00000035852	protein_coding	Misp	ENSMUST00000219305	protein_coding	principal1	10	1	79822558	2569
ENSMUSG00000031527	protein_coding	Eri1	ENSMUST00000210884	protein_coding		8	-1	35496196	592
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000013773	protein_coding	principal1	5	1	31054780	7137
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000136597	retained_intron		7	1	127800671	809
ENSMUSG00000031073	protein_coding	Fgf15	ENSMUST00000208515	retained_intron		7	1	144896541	809
ENSMUSG00000043110	protein_coding	Lrrn4	ENSMUST00000049787	protein_coding	principal1	2	-1	132880891	3715
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000186360	nonsense_mediated_decay		15	1	74516438	5899
ENSMUSG00000031527	protein_coding	Eri1	ENSMUST00000210483	protein_coding		8	-1	35495052	665
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000139068	protein_coding		7	1	127800680	364
ENSMUSG00000031073	protein_coding	Fgf15	ENSMUST00000207033	processed_transcript		7	1	144896559	600
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000201838	protein_coding		5	1	31054811	3153
ENSMUSG00000035852	protein_coding	Misp	ENSMUST00000046833	protein_coding	principal1	10	1	79822627	2414
ENSMUSG00000031073	protein_coding	Fgf15	ENSMUST00000207229	protein_coding		7	1	144896564	600
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000106271	protein_coding		7	1	127800916	1713
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000235977	protein_coding	alternative2	19	-1	46338638	1050
ENSMUSG00000055805	protein_coding	Fmnl1	ENSMUST00000021322	retained_intron		11	1	103192312	2830
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000086075	protein_coding	principal3	5	-1	125341094	2521
ENSMUSG00000042289	protein_coding	Hsd3b7	ENSMUST00000138432	protein_coding		7	1	127800941	288
ENSMUSG00000035852	protein_coding	Misp	ENSMUST00000218687	protein_coding		10	1	79822628	956
ENSMUSG00000055805	protein_coding	Fmnl1	ENSMUST00000129726	protein_coding		11	1	103196801	450
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000236046	protein_coding	principal2	19	-1	46338608	1167
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000202795	protein_coding		5	1	31054928	6559
ENSMUSG00000035852	protein_coding	Misp	ENSMUST00000219734	protein_coding		10	1	79824687	469
ENSMUSG00000092371	antisense	Gm20511	ENSMUST00000174079	antisense		11	-1	103192896	456
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000236061	protein_coding	principal2	19	-1	46338624	1164
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000201182	protein_coding		5	1	31054928	6529
ENSMUSG00000081048	processed_pseudogene	Gm11760	ENSMUST00000122355	processed_pseudogene		4	1	74044388	796
ENSMUSG00000035852	protein_coding	Misp	ENSMUST00000218531	retained_intron		10	1	79829286	416
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000111390	protein_coding	alternative2	5	-1	125341071	2367
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000236980	protein_coding	alternative2	19	-1	46338617	999
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000200953	protein_coding		5	1	31054955	6489
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000127148	protein_coding		5	-1	125294109	823
ENSMUSG00000028111	protein_coding	Ctsk	ENSMUST00000015664	protein_coding	principal1	3	1	95499256	1512
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000202967	retained_intron		5	1	31058674	646
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000238013	processed_transcript		19	-1	46332056	534
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000124582	processed_transcript		5	-1	125284159	469
ENSMUSG00000005161	protein_coding	Prdx2	ENSMUST00000109734	protein_coding	principal1	8	1	84969587	1612
ENSMUSG00000023236	protein_coding	Scg5	ENSMUST00000024005	protein_coding	principal1	2	-1	113829121	1208
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000151311	protein_coding	alternative1	18	-1	3327591	2485
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000201844	retained_intron		5	1	31061794	710
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000135736	retained_intron		5	-1	125286677	3093
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000236236	protein_coding		19	-1	46338626	762
ENSMUSG00000102893	lincRNA	Gm37855	ENSMUST00000192571	lincRNA		3	1	87157693	3700
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000202227	processed_transcript		5	1	31066295	346
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000238062	protein_coding		19	-1	46332779	599
ENSMUSG00000023236	protein_coding	Scg5	ENSMUST00000139975	processed_transcript		2	-1	113828762	593
ENSMUSG00000021661	protein_coding	Ankra2	ENSMUST00000150352	protein_coding		13	1	98263074	2217
ENSMUSG00000102247	unprocessed_pseudogene	Gm37715	ENSMUST00000193206	unprocessed_pseudogene		3	1	59424530	235
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000237382	retained_intron		19	-1	46332841	633
ENSMUSG00000083822	processed_pseudogene	Hmgb1-ps5	ENSMUST00000121058	processed_pseudogene		3	1	95530418	557
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000219592	retained_intron		12	1	44328913	3159
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000236768	protein_coding		19	-1	46338627	490
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000202391	processed_transcript		5	1	31070356	583
ENSMUSG00000035785	protein_coding	Cmtm2b	ENSMUST00000041973	protein_coding	principal1	8	1	104322230	880
ENSMUSG00000112237	transcribed_processed_pseudogene	D630033A02Rik	ENSMUST00000220378	processed_transcript		10	-1	122985831	758
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000236066	protein_coding		19	-1	46338702	616
ENSMUSG00000112237	transcribed_processed_pseudogene	D630033A02Rik	ENSMUST00000218534	transcribed_processed_pseudogene		10	-1	122986555	1034
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000201256	retained_intron		5	1	31070469	758
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000236651	protein_coding		19	-1	46338630	310
ENSMUSG00000029510	protein_coding	Gpc2	ENSMUST00000161827	protein_coding	principal2	5	-1	138280005	2586
ENSMUSG00000035785	protein_coding	Cmtm2b	ENSMUST00000212912	protein_coding		8	1	104322615	501
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000187485	nonsense_mediated_decay		15	1	74516831	5621
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000201870	retained_intron		5	1	31070555	772
ENSMUSG00000110600	unprocessed_pseudogene	Gm45878	ENSMUST00000211839	unprocessed_pseudogene		8	-1	104324680	241
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000202827	retained_intron		5	1	31072309	802
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000189200	processed_transcript		15	1	74540397	718
ENSMUSG00000098245	processed_pseudogene	Gm26927	ENSMUST00000182385	processed_pseudogene		13	-1	84340113	965
ENSMUSG00000027953	protein_coding	Slc50a1	ENSMUST00000185119	nonsense_mediated_decay		3	-1	89270479	807
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000202973	protein_coding		5	1	31074117	582
ENSMUSG00000021661	protein_coding	Ankra2	ENSMUST00000226100	protein_coding		13	1	98263139	1476
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000167861	protein_coding	principal2	19	-1	46338660	1941
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000148373	retained_intron		5	-1	125341019	2082
ENSMUSG00000013629	protein_coding	Cad	ENSMUST00000200917	retained_intron		5	1	31075813	658
ENSMUSG00000036748	protein_coding	Cuedc2	ENSMUST00000051234	protein_coding	principal2	19	-1	46338660	1833
ENSMUSG00000021661	protein_coding	Ankra2	ENSMUST00000223606	retained_intron		13	1	98263157	1887
ENSMUSG00000005161	protein_coding	Prdx2	ENSMUST00000005292	protein_coding	principal1	8	1	84969611	1500
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000123338	retained_intron		5	-1	125304542	813
ENSMUSG00000021661	protein_coding	Ankra2	ENSMUST00000150916	protein_coding		13	1	98263158	1028
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000133624	processed_transcript		5	-1	125316632	638
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000137783	protein_coding		5	-1	125340008	358
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000189353	protein_coding		15	1	74561284	643
ENSMUSG00000107745	TEC	Gm43917	ENSMUST00000191984	TEC		6	-1	86263914	2360
ENSMUSG00000028383	protein_coding	Hsdl2	ENSMUST00000030078	protein_coding	principal1	4	1	59581563	2611
ENSMUSG00000021661	protein_coding	Ankra2	ENSMUST00000091356	protein_coding		13	1	98263191	1949
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000156532	processed_transcript		5	-1	125326267	338
ENSMUSG00000037936	protein_coding	Scarb1	ENSMUST00000197310	retained_intron		5	-1	125327719	2459
ENSMUSG00000021661	protein_coding	Ankra2	ENSMUST00000123924	protein_coding		13	1	98263194	2328
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000190524	protein_coding		15	1	74563378	698
ENSMUSG00000106458	TEC	Gm42633	ENSMUST00000198853	TEC		5	-1	125321444	2764
ENSMUSG00000038704	protein_coding	Aspdh	ENSMUST00000035929	protein_coding	principal1	7	1	44465391	1017
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000185682	protein_coding		15	1	74563792	2744
ENSMUSG00000028383	protein_coding	Hsdl2	ENSMUST00000107528	protein_coding		4	1	59581645	2626
ENSMUSG00000005161	protein_coding	Prdx2	ENSMUST00000138748	retained_intron		8	1	84969694	864
ENSMUSG00000021661	protein_coding	Ankra2	ENSMUST00000022164	protein_coding	principal1	13	1	98263242	1755
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000187599	protein_coding		15	1	74563901	614
ENSMUSG00000005161	protein_coding	Prdx2	ENSMUST00000143402	retained_intron		8	1	84969694	993
ENSMUSG00000038704	protein_coding	Aspdh	ENSMUST00000146128	protein_coding		7	1	44465409	830
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000220130	retained_intron		12	1	44328934	4176
ENSMUSG00000028383	protein_coding	Hsdl2	ENSMUST00000128792	protein_coding		4	1	59594310	508
ENSMUSG00000021661	protein_coding	Ankra2	ENSMUST00000155629	retained_intron		13	1	98268430	479
ENSMUSG00000005161	protein_coding	Prdx2	ENSMUST00000109733	protein_coding	principal1	8	1	84969767	1590
ENSMUSG00000026327	protein_coding	Serpinb11	ENSMUST00000191425	protein_coding		1	1	107361198	707
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000186095	processed_transcript		15	1	74570955	2391
ENSMUSG00000057766	protein_coding	Ankrd29	ENSMUST00000118525	protein_coding	principal1	18	-1	12305797	3328
ENSMUSG00000038642	protein_coding	Ctss	ENSMUST00000015667	protein_coding	alternative2	3	1	95526786	1355
ENSMUSG00000030484	protein_coding	Lypd5	ENSMUST00000032683	protein_coding	principal1	7	1	24349196	2239
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000187639	processed_transcript		15	1	74574143	2158
ENSMUSG00000005161	protein_coding	Prdx2	ENSMUST00000125893	protein_coding		8	1	84969857	825
ENSMUSG00000027953	protein_coding	Slc50a1	ENSMUST00000107460	protein_coding		3	-1	89270495	785
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000230935	retained_intron		15	1	74587924	752
ENSMUSG00000038704	protein_coding	Aspdh	ENSMUST00000152902	nonsense_mediated_decay		7	1	44465417	758
ENSMUSG00000005161	protein_coding	Prdx2	ENSMUST00000127215	retained_intron		8	1	84971456	549
ENSMUSG00000029510	protein_coding	Gpc2	ENSMUST00000159689	retained_intron		5	-1	138279962	3281
ENSMUSG00000019913	protein_coding	Sim1	ENSMUST00000219436	protein_coding		10	1	50894754	1687
ENSMUSG00000075267	protein_coding	Pjvk	ENSMUST00000153471	protein_coding		2	1	76648476	363
ENSMUSG00000057766	protein_coding	Ankrd29	ENSMUST00000137948	processed_transcript		18	-1	12271697	2675
ENSMUSG00000003526	protein_coding	Prodh	ENSMUST00000003620	protein_coding	principal1	16	-1	18089292	2386
ENSMUSG00000057766	protein_coding	Ankrd29	ENSMUST00000234183	protein_coding		18	-1	12305702	1552
ENSMUSG00000029510	protein_coding	Gpc2	ENSMUST00000161984	nonsense_mediated_decay		5	-1	138279982	2583
ENSMUSG00000005161	protein_coding	Prdx2	ENSMUST00000164807	protein_coding	principal1	8	1	84970239	1175
ENSMUSG00000057766	protein_coding	Ankrd29	ENSMUST00000122408	protein_coding		18	-1	12305638	850
ENSMUSG00000057766	protein_coding	Ankrd29	ENSMUST00000234405	nonsense_mediated_decay		18	-1	12282345	1224
ENSMUSG00000038704	protein_coding	Aspdh	ENSMUST00000133801	retained_intron		7	1	44465426	889
ENSMUSG00000057766	protein_coding	Ankrd29	ENSMUST00000234212	protein_coding		18	-1	12295991	605
ENSMUSG00000034730	protein_coding	Adgrb1	ENSMUST00000170845	protein_coding		15	1	74563853	2704
ENSMUSG00000029510	protein_coding	Gpc2	ENSMUST00000162909	retained_intron		5	-1	138279985	4252
ENSMUSG00000038642	protein_coding	Ctss	ENSMUST00000116304	protein_coding	principal3	3	1	95526786	1355
ENSMUSG00000107930	processed_pseudogene	Gm44162	ENSMUST00000203543	processed_pseudogene		6	1	110033389	544
ENSMUSG00000038704	protein_coding	Aspdh	ENSMUST00000135624	protein_coding		7	1	44465444	582
ENSMUSG00000027953	protein_coding	Slc50a1	ENSMUST00000132445	retained_intron		3	-1	89270523	1086
ENSMUSG00000029510	protein_coding	Gpc2	ENSMUST00000014089	protein_coding	alternative2	5	-1	138279965	2514
ENSMUSG00000038704	protein_coding	Aspdh	ENSMUST00000156957	protein_coding		7	1	44466230	519
ENSMUSG00000003526	protein_coding	Prodh	ENSMUST00000136776	protein_coding		16	-1	18090203	2041
ENSMUSG00000027953	protein_coding	Slc50a1	ENSMUST00000133575	retained_intron		3	-1	89270526	1176
ENSMUSG00000102485	processed_pseudogene	Gm37922	ENSMUST00000195596	processed_pseudogene		3	1	93305015	455
ENSMUSG00000108247	processed_pseudogene	Gm19039	ENSMUST00000204363	processed_pseudogene		6	1	110378054	575
ENSMUSG00000051811	protein_coding	Cox6b2	ENSMUST00000183971	protein_coding		7	-1	4752972	401
ENSMUSG00000038704	protein_coding	Aspdh	ENSMUST00000207591	TEC		7	1	44467318	440
ENSMUSG00000057766	protein_coding	Ankrd29	ENSMUST00000142066	protein_coding		18	-1	12305720	353
ENSMUSG00000029510	protein_coding	Gpc2	ENSMUST00000161055	retained_intron		5	-1	138278237	1574
ENSMUSG00000101210	TEC	Gm28720	ENSMUST00000190728	TEC		6	1	86494649	3156
ENSMUSG00000003526	protein_coding	Prodh	ENSMUST00000141635	nonsense_mediated_decay		16	-1	18079268	863
ENSMUSG00000026327	protein_coding	Serpinb11	ENSMUST00000027566	protein_coding	principal1	1	1	107361929	2084
ENSMUSG00000003526	protein_coding	Prodh	ENSMUST00000126087	protein_coding		16	-1	18079942	732
ENSMUSG00000029510	protein_coding	Gpc2	ENSMUST00000159350	processed_transcript		5	-1	138279963	901
ENSMUSG00000003526	protein_coding	Prodh	ENSMUST00000232554	protein_coding		16	-1	18079222	473
ENSMUSG00000102550	processed_pseudogene	Gm8276	ENSMUST00000192231	processed_pseudogene		3	1	59431537	1812
ENSMUSG00000003526	protein_coding	Prodh	ENSMUST00000232384	retained_intron		16	-1	18080248	714
ENSMUSG00000075267	protein_coding	Pjvk	ENSMUST00000144817	protein_coding		2	1	76648499	724
ENSMUSG00000027953	protein_coding	Slc50a1	ENSMUST00000029565	protein_coding	principal1	3	-1	89270570	1022
ENSMUSG00000003526	protein_coding	Prodh	ENSMUST00000232502	retained_intron		16	-1	18089143	4943
ENSMUSG00000100726	protein_coding	Gm21497	ENSMUST00000189455	protein_coding	principal1	Y	1	61646746	919
ENSMUSG00000105124	transcribed_processed_pseudogene	Gm5297	ENSMUST00000198555	transcribed_processed_pseudogene		5	-1	72628028	1171
ENSMUSG00000087210	lincRNA	Gm15391	ENSMUST00000147509	lincRNA		1	-1	107387412	257
ENSMUSG00000003526	protein_coding	Prodh	ENSMUST00000132241	protein_coding		16	-1	18089022	687
ENSMUSG00000100474	unprocessed_pseudogene	Gm29614	ENSMUST00000189263	unprocessed_pseudogene		Y	-1	61735071	694
ENSMUSG00000103211	processed_pseudogene	Gm38288	ENSMUST00000195330	processed_pseudogene		3	-1	59474095	1320
ENSMUSG00000106247	protein_coding	Gm43720	ENSMUST00000159067	nonsense_mediated_decay	principal1	5	-1	138279958	6411
ENSMUSG00000027953	protein_coding	Slc50a1	ENSMUST00000144777	retained_intron		3	-1	89270525	1332
ENSMUSG00000027953	protein_coding	Slc50a1	ENSMUST00000148095	retained_intron		3	-1	89270569	1045
ENSMUSG00000104038	unprocessed_pseudogene	Gm37771	ENSMUST00000193121	unprocessed_pseudogene		3	1	59483024	265
ENSMUSG00000022571	protein_coding	Pycrl	ENSMUST00000053918	protein_coding	principal1	15	-1	75921560	1339
ENSMUSG00000042308	protein_coding	Setd1a	ENSMUST00000047075	protein_coding	principal1	7	1	127776670	6487
ENSMUSG00000046440	processed_pseudogene	Gm5564	ENSMUST00000034916	processed_pseudogene		5	1	138504813	967
ENSMUSG00000057829	processed_pseudogene	Gm5278	ENSMUST00000055957	processed_pseudogene		3	-1	93433766	552
ENSMUSG00000027953	protein_coding	Slc50a1	ENSMUST00000130230	protein_coding		3	-1	89270570	398
ENSMUSG00000042308	protein_coding	Setd1a	ENSMUST00000144406	protein_coding		7	1	127777149	916
ENSMUSG00000051811	protein_coding	Cox6b2	ENSMUST00000182111	protein_coding	principal1	7	-1	4753023	585
ENSMUSG00000021271	protein_coding	Zfp839	ENSMUST00000221549	protein_coding		12	1	110850253	502
ENSMUSG00000027953	protein_coding	Slc50a1	ENSMUST00000130690	processed_transcript		3	-1	89270227	357
ENSMUSG00000071662	protein_coding	Polr2g	ENSMUST00000096261	protein_coding	principal1	19	-1	8798577	890
ENSMUSG00000102476	lincRNA	Gm37245	ENSMUST00000195137	lincRNA		3	-1	93465359	2713
ENSMUSG00000075267	protein_coding	Pjvk	ENSMUST00000099986	protein_coding	principal1	2	1	76650273	1219
ENSMUSG00000042308	protein_coding	Setd1a	ENSMUST00000126761	protein_coding		7	1	127777389	730
ENSMUSG00000103765	TEC	Gm37857	ENSMUST00000191784	TEC		3	1	93393698	1199
ENSMUSG00000019913	protein_coding	Sim1	ENSMUST00000020071	protein_coding	principal1	10	1	50895651	7355
ENSMUSG00000051811	protein_coding	Cox6b2	ENSMUST00000184143	protein_coding		7	-1	4753023	435
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000020939	protein_coding		12	1	44328983	4469
ENSMUSG00000042308	protein_coding	Setd1a	ENSMUST00000143951	protein_coding		7	1	127777695	315
ENSMUSG00000042308	protein_coding	Setd1a	ENSMUST00000141439	processed_transcript		7	1	127778577	389
ENSMUSG00000071662	protein_coding	Polr2g	ENSMUST00000235964	protein_coding		19	-1	8798453	833
ENSMUSG00000098105	processed_pseudogene	Gm8825	ENSMUST00000182565	processed_pseudogene		19	-1	25796807	998
ENSMUSG00000104171	processed_pseudogene	Gm18296	ENSMUST00000192475	processed_pseudogene		3	-1	93421428	783
ENSMUSG00000042308	protein_coding	Setd1a	ENSMUST00000047157	protein_coding	principal1	7	1	127777389	5927
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000220126	protein_coding		12	1	44329062	736
ENSMUSG00000103273	TEC	Gm37913	ENSMUST00000192925	TEC		3	1	93306468	2544
ENSMUSG00000118016	processed_transcript	1700048O14Rik	ENSMUST00000237184	processed_transcript		19	-1	26046467	521
ENSMUSG00000108648	antisense	Gm44674	ENSMUST00000206159	antisense		7	1	128728394	415
ENSMUSG00000051811	protein_coding	Cox6b2	ENSMUST00000063324	protein_coding	principal1	7	-1	4753094	553
ENSMUSG00000117950	lincRNA	Gm50376	ENSMUST00000237746	lincRNA		19	-1	26249930	1123
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000217907	nonsense_mediated_decay		12	1	44329250	682
ENSMUSG00000071662	protein_coding	Polr2g	ENSMUST00000237207	processed_transcript		19	-1	8798535	342
ENSMUSG00000108388	TEC	Gm44673	ENSMUST00000205692	TEC		7	-1	128722044	996
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000218540	protein_coding		12	1	44382642	625
ENSMUSG00000108402	TEC	9430064I24Rik	ENSMUST00000206516	TEC		7	-1	127802762	2669
ENSMUSG00000111880	processed_pseudogene	Gm5040	ENSMUST00000218609	processed_pseudogene		10	1	51238829	800
ENSMUSG00000071662	protein_coding	Polr2g	ENSMUST00000236566	processed_transcript		19	-1	8798525	414
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000219928	retained_intron		12	1	44439042	2433
ENSMUSG00000052415	protein_coding	Tchh	ENSMUST00000064257	protein_coding	principal1	3	1	93442330	5823
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000218805	retained_intron		12	1	44439075	677
ENSMUSG00000029999	protein_coding	Tgfa	ENSMUST00000032066	protein_coding	principal1	6	1	86195223	4527
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000220123	nonsense_mediated_decay		12	1	44456660	4943
ENSMUSG00000067220	protein_coding	Cnga1	ENSMUST00000201463	protein_coding	principal1	5	-1	72619154	2510
ENSMUSG00000015843	protein_coding	Rxrg	ENSMUST00000015987	protein_coding	principal1	1	1	167598384	2110
ENSMUSG00000075593	protein_coding	Gal3st4	ENSMUST00000161647	protein_coding	alternative2	5	-1	138272840	1901
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000218431	protein_coding		12	1	44532428	823
ENSMUSG00000071661	protein_coding	Zbtb3	ENSMUST00000172175	protein_coding	principal1	19	1	8802555	2004
ENSMUSG00000039304	protein_coding	Tnfsf10	ENSMUST00000046383	protein_coding	principal1	3	1	27317028	4993
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000219939	nonsense_mediated_decay		12	1	44532583	939
ENSMUSG00000051811	protein_coding	Cox6b2	ENSMUST00000182738	protein_coding		7	-1	4753009	423
ENSMUSG00000015843	protein_coding	Rxrg	ENSMUST00000111386	protein_coding	principal1	1	1	167598460	1705
ENSMUSG00000041984	protein_coding	Rptn	ENSMUST00000045912	protein_coding	principal1	3	1	93393699	4146
ENSMUSG00000063568	protein_coding	Jazf1	ENSMUST00000128282	processed_transcript		6	-1	52778309	1914
ENSMUSG00000051811	protein_coding	Cox6b2	ENSMUST00000183334	nonsense_mediated_decay		7	-1	4753023	490
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000219906	nonsense_mediated_decay		12	1	44547294	546
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000220082	protein_coding		12	1	44576604	916
ENSMUSG00000063568	protein_coding	Jazf1	ENSMUST00000136250	processed_transcript		6	-1	52909620	2197
ENSMUSG00000039304	protein_coding	Tnfsf10	ENSMUST00000174840	protein_coding		3	1	27317061	989
ENSMUSG00000029999	protein_coding	Tgfa	ENSMUST00000193710	processed_transcript		6	1	86195251	2119
ENSMUSG00000108815	protein_coding	Gm49388	ENSMUST00000154987	nonsense_mediated_decay	principal5	7	1	127785608	5188
ENSMUSG00000051811	protein_coding	Cox6b2	ENSMUST00000182048	protein_coding	principal1	7	-1	4753038	465
ENSMUSG00000075593	protein_coding	Gal3st4	ENSMUST00000100530	protein_coding	principal3	5	-1	138272754	3162
ENSMUSG00000015843	protein_coding	Rxrg	ENSMUST00000111384	protein_coding	principal1	1	1	167598480	1967
ENSMUSG00000029999	protein_coding	Tgfa	ENSMUST00000192058	protein_coding		6	1	86195390	410
ENSMUSG00000108815	protein_coding	Gm49388	ENSMUST00000136823	nonsense_mediated_decay	alternative2	7	1	127799391	536
ENSMUSG00000024298	protein_coding	Zfp871	ENSMUST00000159086	protein_coding	principal1	17	-1	32788287	10851
ENSMUSG00000051811	protein_coding	Cox6b2	ENSMUST00000182272	retained_intron		7	-1	4752528	519
ENSMUSG00000109522	unprocessed_pseudogene	Olfr1319-ps1	ENSMUST00000208550	unprocessed_pseudogene		2	1	112167724	274
ENSMUSG00000067220	protein_coding	Cnga1	ENSMUST00000087213	protein_coding	principal1	5	-1	72642752	2739
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000217796	processed_transcript		12	1	44583046	4487
ENSMUSG00000051811	protein_coding	Cox6b2	ENSMUST00000182173	protein_coding		7	-1	4753002	391
ENSMUSG00000020598	protein_coding	Nrcam	ENSMUST00000218062	protein_coding		12	1	44584943	1586
ENSMUSG00000081884	processed_pseudogene	Gm11821	ENSMUST00000117335	processed_pseudogene		4	1	11400346	979
ENSMUSG00000029999	protein_coding	Tgfa	ENSMUST00000194449	processed_transcript		6	1	86211594	843
ENSMUSG00000112056	TEC	Gm48181	ENSMUST00000217821	TEC		12	1	44373197	1066
ENSMUSG00000067220	protein_coding	Cnga1	ENSMUST00000126799	protein_coding		5	-1	72637851	2061
ENSMUSG00000082255	processed_pseudogene	Gm11822	ENSMUST00000119177	processed_pseudogene		4	-1	11420764	415
ENSMUSG00000112448	TEC	Gm48182	ENSMUST00000218248	TEC		12	1	44409790	1680
ENSMUSG00000073247	protein_coding	Gm10486	ENSMUST00000101647	protein_coding	principal1	X	1	35067384	924
ENSMUSG00000024298	protein_coding	Zfp871	ENSMUST00000057501	protein_coding		17	-1	32787547	3210
ENSMUSG00000118195	processed_pseudogene	Gm8572	ENSMUST00000235787	processed_pseudogene		18	1	52952549	553
ENSMUSG00000067220	protein_coding	Cnga1	ENSMUST00000135701	protein_coding		5	-1	72630937	157
ENSMUSG00000075593	protein_coding	Gal3st4	ENSMUST00000161279	protein_coding	principal3	5	-1	138272801	2059
ENSMUSG00000041734	protein_coding	Kirrel	ENSMUST00000159976	protein_coding	principal2	3	-1	87174700	7236
ENSMUSG00000067220	protein_coding	Cnga1	ENSMUST00000202230	retained_intron		5	-1	72644275	1989
ENSMUSG00000024298	protein_coding	Zfp871	ENSMUST00000168337	processed_transcript		17	-1	32788250	1006
ENSMUSG00000075593	protein_coding	Gal3st4	ENSMUST00000162557	processed_transcript		5	-1	138272801	1755
ENSMUSG00000067220	protein_coding	Cnga1	ENSMUST00000169997	protein_coding	principal1	5	-1	72637846	2251
ENSMUSG00000048497	protein_coding	Mmgt2	ENSMUST00000062860	protein_coding		11	1	62648664	343
ENSMUSG00000015843	protein_coding	Rxrg	ENSMUST00000111380	protein_coding		1	1	167618309	1630
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000120509	protein_coding	alternative1	10	1	21882184	3096
ENSMUSG00000075593	protein_coding	Gal3st4	ENSMUST00000161665	protein_coding		5	-1	138272749	609
ENSMUSG00000100174	TEC	Gm28719	ENSMUST00000187779	TEC		6	1	86498781	1757
ENSMUSG00000051136	protein_coding	Ghsr	ENSMUST00000057186	protein_coding	principal1	3	1	27371351	4433
ENSMUSG00000118227	lincRNA	Gm30288	ENSMUST00000235899	lincRNA		18	-1	81453972	1690
ENSMUSG00000118227	lincRNA	Gm30288	ENSMUST00000237951	lincRNA		18	-1	81457899	1651
ENSMUSG00000041734	protein_coding	Kirrel	ENSMUST00000041732	protein_coding	alternative2	3	-1	87174550	2160
ENSMUSG00000118227	lincRNA	Gm30288	ENSMUST00000236435	lincRNA		18	-1	81457899	1582
ENSMUSG00000091405	protein_coding	H4c14	ENSMUST00000171473	protein_coding	principal1	3	-1	96263311	1630
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000143094	processed_transcript		10	1	21882369	749
ENSMUSG00000048497	protein_coding	Mmgt2	ENSMUST00000148707	retained_intron		11	1	62648813	2736
ENSMUSG00000021271	protein_coding	Zfp839	ENSMUST00000170060	protein_coding	principal1	12	1	110850279	3723
ENSMUSG00000041991	protein_coding	Hrnr	ENSMUST00000090856	protein_coding	principal2	3	1	93319749	10656
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000124203	protein_coding		10	1	21928470	270
ENSMUSG00000107689	lincRNA	Gm44386	ENSMUST00000204288	lincRNA		6	-1	86516273	429
ENSMUSG00000060206	protein_coding	Zfp462	ENSMUST00000133895	protein_coding		4	1	54945048	363
ENSMUSG00000048497	protein_coding	Mmgt2	ENSMUST00000148696	processed_transcript		11	1	62648817	366
ENSMUSG00000103348	TEC	Gm37053	ENSMUST00000192399	TEC		1	-1	106606870	2087
ENSMUSG00000103940	TEC	Gm38227	ENSMUST00000193036	TEC		3	1	96263785	1602
ENSMUSG00000048497	protein_coding	Mmgt2	ENSMUST00000142112	processed_transcript		11	1	62648820	374
ENSMUSG00000041734	protein_coding	Kirrel	ENSMUST00000107618	protein_coding	principal2	3	-1	87174747	7278
ENSMUSG00000021271	protein_coding	Zfp839	ENSMUST00000222460	protein_coding		12	1	110850306	2385
ENSMUSG00000048497	protein_coding	Mmgt2	ENSMUST00000127589	protein_coding		11	1	62648831	388
ENSMUSG00000104932	lincRNA	Gm40323	ENSMUST00000200649	lincRNA		5	1	125361175	645
ENSMUSG00000041991	protein_coding	Hrnr	ENSMUST00000093774	protein_coding	alternative2	3	1	93319749	11187
ENSMUSG00000063568	protein_coding	Jazf1	ENSMUST00000074541	protein_coding	principal1	6	-1	53068631	2203
ENSMUSG00000091498	processed_pseudogene	Mpc1-ps	ENSMUST00000181662	processed_pseudogene		12	-1	110858894	330
ENSMUSG00000082646	processed_pseudogene	Gm12732	ENSMUST00000121688	processed_pseudogene		11	1	77639854	180
ENSMUSG00000048497	protein_coding	Mmgt2	ENSMUST00000155759	protein_coding	principal1	11	1	62648835	589
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000142174	protein_coding		10	1	21978672	563
ENSMUSG00000080759	processed_pseudogene	Gm15573	ENSMUST00000119487	processed_pseudogene		6	1	53045884	540
ENSMUSG00000026394	protein_coding	Atp6v1g3	ENSMUST00000027643	protein_coding	principal1	1	1	138273738	1887
ENSMUSG00000081543	processed_pseudogene	Gm12733	ENSMUST00000119871	processed_pseudogene		11	-1	77644910	767
ENSMUSG00000081872	processed_pseudogene	Gm15572	ENSMUST00000119248	processed_pseudogene		6	-1	52843701	593
ENSMUSG00000101793	processed_pseudogene	Gm28500	ENSMUST00000190286	processed_pseudogene		1	1	138377264	151
ENSMUSG00000048497	protein_coding	Mmgt2	ENSMUST00000129162	protein_coding	principal1	11	1	62649449	1828
ENSMUSG00000115783	lincRNA	Bc1	ENSMUST00000227063	lincRNA		7	1	144914470	168
ENSMUSG00000060019	processed_pseudogene	Gm10073	ENSMUST00000073722	processed_pseudogene		8	-1	106573350	342
ENSMUSG00000040899	protein_coding	Ccr6	ENSMUST00000231340	protein_coding		17	1	8236043	419
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000150089	protein_coding		10	1	21992223	418
ENSMUSG00000039157	protein_coding	Fam102a	ENSMUST00000136816	retained_intron		2	1	32535332	5935
ENSMUSG00000091968	bidirectional_promoter_lncRNA	Gm17115	ENSMUST00000164075	bidirectional_promoter_lncRNA		17	1	32788394	885
ENSMUSG00000073421	protein_coding	H2-Ab1	ENSMUST00000237429	processed_transcript		17	1	34257689	685
ENSMUSG00000039157	protein_coding	Fam102a	ENSMUST00000133512	protein_coding		2	1	32535333	418
ENSMUSG00000118005	lincRNA	Gm50377	ENSMUST00000236317	lincRNA		19	-1	26308707	611
ENSMUSG00000099139	lincRNA	1110028F18Rik	ENSMUST00000183365	lincRNA		8	1	106587143	1341
ENSMUSG00000117606	processed_pseudogene	Gm5969	ENSMUST00000234291	processed_pseudogene		18	1	32140730	1123
ENSMUSG00000057329	protein_coding	Bcl2	ENSMUST00000112751	protein_coding	principal3	1	-1	106714274	7191
ENSMUSG00000112212	lincRNA	Gm46189	ENSMUST00000219395	lincRNA		10	1	51455980	644
ENSMUSG00000067235	protein_coding	H2-Q10	ENSMUST00000174525	protein_coding	principal1	17	1	35470089	1991
ENSMUSG00000057329	protein_coding	Bcl2	ENSMUST00000189999	protein_coding	alternative2	1	-1	106713179	2841
ENSMUSG00000117707	lincRNA	Gm50378	ENSMUST00000237890	lincRNA		19	-1	26467779	505
ENSMUSG00000067235	protein_coding	H2-Q10	ENSMUST00000174589	retained_intron		17	1	35470097	4328
ENSMUSG00000029104	protein_coding	Htt	ENSMUST00000080036	protein_coding	principal1	5	1	34761744	13215
ENSMUSG00000118001	lincRNA	Gm34808	ENSMUST00000237584	lincRNA		19	-1	26484450	503
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000092673	protein_coding	alternative1	10	1	21993890	2576
ENSMUSG00000029104	protein_coding	Htt	ENSMUST00000123755	retained_intron		5	1	34761761	3225
ENSMUSG00000117803	processed_pseudogene	Gm50379	ENSMUST00000236657	processed_pseudogene		19	1	26530752	178
ENSMUSG00000000724	protein_coding	Cryba1	ENSMUST00000124178	retained_intron		11	-1	77721834	1377
ENSMUSG00000055202	protein_coding	Zfp811	ENSMUST00000200914	protein_coding	principal1	17	-1	32809931	3536
ENSMUSG00000054006	antisense	D630008O14Rik	ENSMUST00000144260	antisense		1	1	106541943	1568
ENSMUSG00000067235	protein_coding	H2-Q10	ENSMUST00000068291	protein_coding	principal1	17	1	35470089	1473
ENSMUSG00000114385	processed_pseudogene	Gm48344	ENSMUST00000225870	processed_pseudogene		13	1	41091430	294
ENSMUSG00000029104	protein_coding	Htt	ENSMUST00000202059	retained_intron		5	1	34795788	2614
ENSMUSG00000055202	protein_coding	Zfp811	ENSMUST00000234594	protein_coding		17	-1	32809842	733
ENSMUSG00000029104	protein_coding	Htt	ENSMUST00000156490	retained_intron		5	1	34806728	457
ENSMUSG00000114682	lincRNA	Gm48775	ENSMUST00000224822	lincRNA		19	1	26572996	608
ENSMUSG00000055202	protein_coding	Zfp811	ENSMUST00000080905	protein_coding		17	-1	32800938	1656
ENSMUSG00000029104	protein_coding	Htt	ENSMUST00000201613	retained_intron		5	1	34810009	2271
ENSMUSG00000038072	protein_coding	Galnt11	ENSMUST00000196213	processed_transcript		5	1	25221904	4010
ENSMUSG00000029104	protein_coding	Htt	ENSMUST00000135039	retained_intron		5	1	34877192	1570
ENSMUSG00000054006	antisense	D630008O14Rik	ENSMUST00000149909	antisense		1	1	106541943	1043
ENSMUSG00000038782	protein_coding	1700028J19Rik	ENSMUST00000236952	protein_coding	principal5	7	-1	44236184	1424
ENSMUSG00000118232	lincRNA	Gm50269	ENSMUST00000236943	lincRNA		17	-1	26464157	2338
ENSMUSG00000038782	protein_coding	1700028J19Rik	ENSMUST00000237383	protein_coding	alternative2	7	-1	44246695	1306
ENSMUSG00000118107	lincRNA	Gm34455	ENSMUST00000236778	lincRNA		17	-1	26503200	2872
ENSMUSG00000118107	lincRNA	Gm34455	ENSMUST00000235705	lincRNA		17	-1	26503200	1566
ENSMUSG00000029104	protein_coding	Htt	ENSMUST00000124272	retained_intron		5	1	34886451	3976
ENSMUSG00000118107	lincRNA	Gm34455	ENSMUST00000237346	lincRNA		17	-1	26490909	1662
ENSMUSG00000118107	lincRNA	Gm34455	ENSMUST00000236309	lincRNA		17	-1	26490922	1362
ENSMUSG00000081979	processed_pseudogene	Rps8-ps3	ENSMUST00000121011	processed_pseudogene		6	1	52118242	650
ENSMUSG00000038782	protein_coding	1700028J19Rik	ENSMUST00000206366	protein_coding		7	-1	44232491	1063
ENSMUSG00000074403	protein_coding	H3c13	ENSMUST00000098843	protein_coding	principal1	3	1	96268654	488
ENSMUSG00000082781	processed_pseudogene	Rps19-ps14	ENSMUST00000121832	processed_pseudogene		6	-1	52132046	269
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000020145	protein_coding	principal3	10	1	21994666	2456
ENSMUSG00000093656	antisense	Gm20628	ENSMUST00000177363	antisense		3	-1	96270289	3215
ENSMUSG00000047793	protein_coding	Sned1	ENSMUST00000062202	protein_coding	principal1	1	1	93235841	9147
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000150235	protein_coding	alternative1	18	-1	3337679	2662
ENSMUSG00000038782	protein_coding	1700028J19Rik	ENSMUST00000206686	protein_coding	alternative2	7	-1	44236104	1166
ENSMUSG00000105827	protein_coding	H2bc18	ENSMUST00000177113	protein_coding	principal1	3	1	96269752	381
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000141218	retained_intron		10	1	21994683	347
ENSMUSG00000038782	protein_coding	1700028J19Rik	ENSMUST00000037220	protein_coding	alternative2	7	-1	44236122	1245
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000126560	retained_intron		10	1	21994711	688
ENSMUSG00000038782	protein_coding	1700028J19Rik	ENSMUST00000208099	processed_transcript		7	-1	44236117	978
ENSMUSG00000048170	protein_coding	Mcmbp	ENSMUST00000057557	protein_coding	principal1	7	-1	128740495	4237
ENSMUSG00000050936	lincRNA	Gm42743	ENSMUST00000051089	lincRNA		3	1	96269721	1511
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000124350	protein_coding		10	1	21994910	859
ENSMUSG00000108622	protein_coding	Gm36864	ENSMUST00000223070	protein_coding	principal5	7	1	44236177	1513
ENSMUSG00000108622	protein_coding	Gm36864	ENSMUST00000222162	nonsense_mediated_decay		7	1	44236177	1158
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000135195	retained_intron		10	1	21996591	644
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238708	processed_transcript		Y	-1	29684609	1078
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000122958	protein_coding	alternative1	18	-1	3299559	2254
ENSMUSG00000108622	protein_coding	Gm36864	ENSMUST00000205530	protein_coding	alternative2	7	1	44236177	684
ENSMUSG00000086757	lincRNA	Gm2309	ENSMUST00000149994	lincRNA		X	1	35129015	1941
ENSMUSG00000048170	protein_coding	Mcmbp	ENSMUST00000119081	protein_coding		7	-1	128740486	2347
ENSMUSG00000047793	protein_coding	Sned1	ENSMUST00000172289	retained_intron		1	1	93235851	3757
ENSMUSG00000048170	protein_coding	Mcmbp	ENSMUST00000140714	processed_transcript		7	-1	128699219	463
ENSMUSG00000047793	protein_coding	Sned1	ENSMUST00000165843	processed_transcript		1	1	93274431	753
ENSMUSG00000048170	protein_coding	Mcmbp	ENSMUST00000127807	retained_intron		7	-1	128702837	680
ENSMUSG00000047793	protein_coding	Sned1	ENSMUST00000163688	protein_coding		1	1	93281237	1719
ENSMUSG00000095899	unprocessed_pseudogene	Gm2318	ENSMUST00000119623	unprocessed_pseudogene		X	-1	35227650	639
ENSMUSG00000040899	protein_coding	Ccr6	ENSMUST00000164411	protein_coding	principal1	17	1	8236212	1398
ENSMUSG00000048170	protein_coding	Mcmbp	ENSMUST00000146352	retained_intron		7	-1	128714858	614
ENSMUSG00000000724	protein_coding	Cryba1	ENSMUST00000078623	protein_coding	principal1	11	-1	77725283	778
ENSMUSG00000031448	protein_coding	Adprhl1	ENSMUST00000204916	protein_coding		8	-1	13254162	5228
ENSMUSG00000103598	unprocessed_pseudogene	Gm4856	ENSMUST00000192696	unprocessed_pseudogene		3	-1	59535226	1091
ENSMUSG00000047793	protein_coding	Sned1	ENSMUST00000168122	retained_intron		1	1	93286842	679
ENSMUSG00000047793	protein_coding	Sned1	ENSMUST00000165883	retained_intron		1	1	93295695	439
ENSMUSG00000031448	protein_coding	Adprhl1	ENSMUST00000033825	protein_coding	principal1	8	-1	13254162	1372
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000100036	protein_coding	alternative1	10	1	21992223	2476
ENSMUSG00000019970	protein_coding	Sgk1	ENSMUST00000164659	protein_coding		10	1	21978672	2602
ENSMUSG00000031072	protein_coding	LTO1	ENSMUST00000128057	protein_coding	alternative2	7	1	144915100	2231
ENSMUSG00000031448	protein_coding	Adprhl1	ENSMUST00000166438	retained_intron		8	-1	13243085	690
ENSMUSG00000105763	processed_pseudogene	Gm19088	ENSMUST00000198800	processed_pseudogene		5	1	25126135	566
ENSMUSG00000031448	protein_coding	Adprhl1	ENSMUST00000168498	protein_coding		8	-1	13254071	658
ENSMUSG00000097657	processed_pseudogene	Gm7389	ENSMUST00000181162	processed_pseudogene		8	1	3994626	2884
ENSMUSG00000031448	protein_coding	Adprhl1	ENSMUST00000171619	protein_coding		8	-1	13254096	483
ENSMUSG00000039157	protein_coding	Fam102a	ENSMUST00000048375	protein_coding	principal1	2	1	32535359	4223
ENSMUSG00000109267	processed_pseudogene	Gm45048	ENSMUST00000207058	processed_pseudogene		8	-1	4016882	429
ENSMUSG00000021135	protein_coding	Slc10a1	ENSMUST00000218162	protein_coding	principal2	12	-1	80968705	1749
ENSMUSG00000075700	protein_coding	Selenot	ENSMUST00000107924	protein_coding	principal1	3	1	58576636	3157
ENSMUSG00000021135	protein_coding	Slc10a1	ENSMUST00000218342	protein_coding	alternative2	12	-1	80967984	1411
ENSMUSG00000039157	protein_coding	Fam102a	ENSMUST00000133366	protein_coding		2	1	32535733	370
ENSMUSG00000045071	protein_coding	E130308A19Rik	ENSMUST00000070150	protein_coding	principal1	4	1	59626211	10856
ENSMUSG00000021135	protein_coding	Slc10a1	ENSMUST00000220266	nonsense_mediated_decay		12	-1	80968078	518
ENSMUSG00000040899	protein_coding	Ccr6	ENSMUST00000097418	protein_coding	principal1	17	1	8242526	1755
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000154135	protein_coding	principal3	18	-1	3337488	2530
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000001712	protein_coding	principal1	10	-1	75764316	7417
ENSMUSG00000039157	protein_coding	Fam102a	ENSMUST00000147723	processed_transcript		2	1	32540190	377
ENSMUSG00000075700	protein_coding	Selenot	ENSMUST00000125815	retained_intron		3	1	58576698	781
ENSMUSG00000118300	lincRNA	Gm50412	ENSMUST00000236629	lincRNA		18	1	81480357	1025
ENSMUSG00000009614	protein_coding	Sardh	ENSMUST00000091224	processed_transcript		2	-1	27232697	2744
ENSMUSG00000118300	lincRNA	Gm50412	ENSMUST00000237597	lincRNA		18	1	81480357	1426
ENSMUSG00000117870	lincRNA	Gm41792	ENSMUST00000235510	lincRNA		18	-1	81637659	2315
ENSMUSG00000117870	lincRNA	Gm41792	ENSMUST00000236490	lincRNA		18	-1	81637747	3110
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000140332	protein_coding		18	-1	3281769	1015
ENSMUSG00000021135	protein_coding	Slc10a1	ENSMUST00000095572	protein_coding	principal2	12	-1	80968079	1674
ENSMUSG00000084761	antisense	Gm12406	ENSMUST00000155382	antisense		4	1	41639378	697
ENSMUSG00000081852	processed_pseudogene	Gm12281	ENSMUST00000119536	processed_pseudogene		11	1	62697218	298
ENSMUSG00000045071	protein_coding	E130308A19Rik	ENSMUST00000052420	protein_coding		4	1	59626243	3205
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000140912	processed_transcript		18	-1	3337513	1458
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000218814	processed_transcript		10	-1	75667832	718
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000217664	processed_transcript		10	-1	75668094	341
ENSMUSG00000031072	protein_coding	LTO1	ENSMUST00000033388	protein_coding	principal3	7	1	144915135	2015
ENSMUSG00000045071	protein_coding	E130308A19Rik	ENSMUST00000152797	processed_transcript		4	1	59691189	748
ENSMUSG00000045071	protein_coding	E130308A19Rik	ENSMUST00000221633	processed_transcript		4	1	59733258	1097
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000218486	retained_intron		10	-1	75700375	826
ENSMUSG00000108028	processed_pseudogene	Gm8143	ENSMUST00000203654	processed_pseudogene		6	-1	53171735	1186
ENSMUSG00000060206	protein_coding	Zfp462	ENSMUST00000098070	protein_coding	principal2	4	1	54947976	10465
ENSMUSG00000026273	protein_coding	Mterf4	ENSMUST00000112944	protein_coding		1	-1	93305863	3097
ENSMUSG00000031072	protein_coding	LTO1	ENSMUST00000093964	retained_intron		7	1	144915171	357
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000219806	protein_coding		10	-1	75715644	573
ENSMUSG00000028445	protein_coding	Enho	ENSMUST00000127306	protein_coding	principal1	4	-1	41640324	1269
ENSMUSG00000031072	protein_coding	LTO1	ENSMUST00000141737	protein_coding		7	1	144915173	400
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000154470	protein_coding	alternative1	18	-1	3337748	1996
ENSMUSG00000051695	protein_coding	Pcbp1	ENSMUST00000053015	protein_coding	principal1	6	-1	86526321	1830
ENSMUSG00000060206	protein_coding	Zfp462	ENSMUST00000030131	protein_coding	alternative2	4	1	55011366	4823
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000219682	processed_transcript		10	-1	75725234	634
ENSMUSG00000107935	lincRNA	Gm4872	ENSMUST00000205210	lincRNA		6	1	53221164	1299
ENSMUSG00000047642	protein_coding	D930020B18Rik	ENSMUST00000142501	protein_coding		10	1	121641588	922
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000217810	protein_coding		10	-1	75733771	2115
ENSMUSG00000031072	protein_coding	LTO1	ENSMUST00000105895	protein_coding	alternative2	7	1	144915180	1016
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000129435	protein_coding		18	-1	3299556	1160
ENSMUSG00000060206	protein_coding	Zfp462	ENSMUST00000079605	protein_coding	alternative2	4	1	55011480	4684
ENSMUSG00000026273	protein_coding	Mterf4	ENSMUST00000027492	protein_coding	principal1	1	-1	93305915	1366
ENSMUSG00000114910	processed_pseudogene	Gm48756	ENSMUST00000226038	processed_pseudogene		13	-1	35937833	285
ENSMUSG00000040899	protein_coding	Ccr6	ENSMUST00000166348	protein_coding	principal1	17	1	8243811	1270
ENSMUSG00000031072	protein_coding	LTO1	ENSMUST00000147460	retained_intron		7	1	144916136	807
ENSMUSG00000021362	protein_coding	Gcm2	ENSMUST00000225420	retained_intron		13	-1	41105683	2662
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000218790	nonsense_mediated_decay		10	-1	75726950	593
ENSMUSG00000031072	protein_coding	LTO1	ENSMUST00000207453	protein_coding		7	1	144917663	418
ENSMUSG00000040899	protein_coding	Ccr6	ENSMUST00000180103	protein_coding	principal1	17	1	8243811	1385
ENSMUSG00000031072	protein_coding	LTO1	ENSMUST00000207094	retained_intron		7	1	144918222	4022
ENSMUSG00000026273	protein_coding	Mterf4	ENSMUST00000136754	processed_transcript		1	-1	93302902	477
ENSMUSG00000040899	protein_coding	Ccr6	ENSMUST00000177568	protein_coding	principal1	17	1	8243811	1294
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000220009	retained_intron		10	-1	75732620	854
ENSMUSG00000114647	antisense	Gm30127	ENSMUST00000223592	antisense		13	-1	35965008	978
ENSMUSG00000026273	protein_coding	Mterf4	ENSMUST00000112942	protein_coding		1	-1	93305864	1525
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000218878	nonsense_mediated_decay		10	-1	75732411	705
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000151084	protein_coding		18	-1	3281747	957
ENSMUSG00000040899	protein_coding	Ccr6	ENSMUST00000167956	protein_coding	principal1	17	1	8243814	1172
ENSMUSG00000026273	protein_coding	Mterf4	ENSMUST00000152307	retained_intron		1	-1	93305879	1664
ENSMUSG00000037857	protein_coding	Nufip2	ENSMUST00000100802	protein_coding	principal2	11	1	77686155	5158
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000179330	processed_transcript		Y	-1	29684609	772
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000131899	protein_coding		18	-1	3327507	1417
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000180373	processed_transcript		Y	-1	29684609	639
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238654	processed_transcript		Y	-1	29684609	373
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238257	processed_transcript		Y	-1	29684609	521
ENSMUSG00000112029	lincRNA	Gm33337	ENSMUST00000219594	lincRNA		10	-1	118715726	228
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000218951	retained_intron		10	-1	75751818	491
ENSMUSG00000037857	protein_coding	Nufip2	ENSMUST00000181023	protein_coding	alternative2	11	1	77686172	2318
ENSMUSG00000003778	protein_coding	Brd8	ENSMUST00000003876	protein_coding	principal3	18	-1	34624601	4468
ENSMUSG00000040899	protein_coding	Ccr6	ENSMUST00000232412	processed_transcript		17	1	8245058	369
ENSMUSG00000089887	lincRNA	4930428N03Rik	ENSMUST00000225654	lincRNA		14	1	24617557	892
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000218469	protein_coding		10	-1	75764270	361
ENSMUSG00000089887	lincRNA	4930428N03Rik	ENSMUST00000038250	lincRNA		14	1	24617568	986
ENSMUSG00000089887	lincRNA	4930428N03Rik	ENSMUST00000224456	lincRNA		14	1	24619031	3212
ENSMUSG00000047642	protein_coding	D930020B18Rik	ENSMUST00000140802	nonsense_mediated_decay		10	1	121641701	2581
ENSMUSG00000050423	protein_coding	Ppp1r3g	ENSMUST00000225537	protein_coding	principal1	13	1	35958839	2389
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238537	processed_transcript		Y	-1	29684609	575
ENSMUSG00000003778	protein_coding	Brd8	ENSMUST00000115766	protein_coding		18	-1	34624601	4258
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238742	processed_transcript		Y	-1	29684609	255
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238469	processed_transcript		Y	-1	29684609	708
ENSMUSG00000037857	protein_coding	Nufip2	ENSMUST00000126942	processed_transcript		11	1	77687459	777
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238371	processed_transcript		Y	-1	29684609	809
ENSMUSG00000020196	protein_coding	Cabin1	ENSMUST00000218480	retained_intron		10	-1	75764341	3095
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238464	processed_transcript		Y	-1	29684609	522
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238766	processed_transcript		Y	-1	29684609	568
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238239	processed_transcript		Y	-1	29684609	389
ENSMUSG00000037857	protein_coding	Nufip2	ENSMUST00000155238	processed_transcript		11	1	77687601	388
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238242	processed_transcript		Y	-1	29684609	190
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238587	processed_transcript		Y	-1	29684609	684
ENSMUSG00000050423	protein_coding	Ppp1r3g	ENSMUST00000132661	protein_coding	principal1	13	1	35967853	2361
ENSMUSG00000089887	lincRNA	4930428N03Rik	ENSMUST00000159744	lincRNA		14	1	24622138	370
ENSMUSG00000040899	protein_coding	Ccr6	ENSMUST00000231545	protein_coding	principal1	17	1	8245065	1292
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238388	processed_transcript		Y	-1	29684609	506
ENSMUSG00000014226	protein_coding	Cacybp	ENSMUST00000014370	protein_coding	principal1	1	-1	160212875	2098
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238234	processed_transcript		Y	-1	29684609	388
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238698	processed_transcript		Y	-1	29684609	440
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238561	processed_transcript		Y	-1	29684609	322
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000130599	protein_coding		18	-1	3325474	764
ENSMUSG00000089887	lincRNA	4930428N03Rik	ENSMUST00000159562	lincRNA		14	1	24622159	756
ENSMUSG00000050423	protein_coding	Ppp1r3g	ENSMUST00000172766	processed_transcript		13	1	35967946	571
ENSMUSG00000021362	protein_coding	Gcm2	ENSMUST00000021791	protein_coding	principal1	13	-1	41110183	3073
ENSMUSG00000115807	unprocessed_pseudogene	Gm49100	ENSMUST00000226269	unprocessed_pseudogene		15	1	12955722	878
ENSMUSG00000112535	lincRNA	Gm47425	ENSMUST00000219645	lincRNA		10	-1	118719428	1095
ENSMUSG00000014226	protein_coding	Cacybp	ENSMUST00000195654	protein_coding		1	-1	160212805	544
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238231	processed_transcript		Y	-1	29659196	3038
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000020268	protein_coding	principal1	10	-1	62792231	4352
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000124747	protein_coding		18	-1	3281132	973
ENSMUSG00000080906	processed_pseudogene	Gm12095	ENSMUST00000121962	processed_pseudogene		11	1	29982414	816
ENSMUSG00000112198	lincRNA	Gm4065	ENSMUST00000218911	lincRNA		10	-1	118805259	986
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238363	transcribed_unprocessed_pseudogene		Y	-1	29656434	464
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000049942	protein_coding		18	-1	3281078	953
ENSMUSG00000014226	protein_coding	Cacybp	ENSMUST00000194167	retained_intron		1	-1	160212726	589
ENSMUSG00000112198	lincRNA	Gm4065	ENSMUST00000218715	lincRNA		10	-1	118805290	763
ENSMUSG00000021362	protein_coding	Gcm2	ENSMUST00000225271	protein_coding		13	-1	41111035	688
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000127601	protein_coding		18	-1	3325478	1024
ENSMUSG00000002346	protein_coding	Slc25a42	ENSMUST00000110127	protein_coding	principal1	8	-1	70212305	3196
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238567	processed_transcript		Y	-1	29684814	563
ENSMUSG00000073421	protein_coding	H2-Ab1	ENSMUST00000040828	protein_coding	principal1	17	1	34263209	1212
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000219527	protein_coding	principal1	10	-1	62792286	3862
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000147138	protein_coding		18	-1	3281769	436
ENSMUSG00000085000	lincRNA	Gm14553	ENSMUST00000126711	lincRNA		X	-1	35348739	1118
ENSMUSG00000114965	lincRNA	Gm47906	ENSMUST00000223735	lincRNA		14	1	24833635	1455
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238647	processed_transcript		Y	-1	29684799	477
ENSMUSG00000070348	protein_coding	Ccnd1	ENSMUST00000093962	protein_coding	principal1	7	-1	144939869	3740
ENSMUSG00000078157	protein_coding	Fem1al	ENSMUST00000104962	protein_coding	principal1	11	-1	29825668	3274
ENSMUSG00000118461	transcribed_unprocessed_pseudogene	Gm21679	ENSMUST00000238762	processed_transcript		Y	-1	29684348	358
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000156234	protein_coding		18	-1	3325474	1436
ENSMUSG00000109158	TEC	Gm45166	ENSMUST00000209073	TEC		8	-1	23752765	683
ENSMUSG00000073421	protein_coding	H2-Ab1	ENSMUST00000237342	protein_coding		17	1	34263250	639
ENSMUSG00000049122	protein_coding	Frmd3	ENSMUST00000084474	protein_coding	principal1	4	1	74013444	4136
ENSMUSG00000109413	TEC	Gm45165	ENSMUST00000207763	TEC		8	1	23696005	1631
ENSMUSG00000073421	protein_coding	H2-Ab1	ENSMUST00000237866	protein_coding		17	1	34263250	889
ENSMUSG00000073421	protein_coding	H2-Ab1	ENSMUST00000235980	retained_intron		17	1	34263261	772
ENSMUSG00000070348	protein_coding	Ccnd1	ENSMUST00000208193	retained_intron		7	-1	144939925	1773
ENSMUSG00000073421	protein_coding	H2-Ab1	ENSMUST00000236643	retained_intron		17	1	34263331	1169
ENSMUSG00000070348	protein_coding	Ccnd1	ENSMUST00000135985	retained_intron		7	-1	144938197	470
ENSMUSG00000073421	protein_coding	H2-Ab1	ENSMUST00000173103	retained_intron		17	1	34267102	628
ENSMUSG00000002346	protein_coding	Slc25a42	ENSMUST00000139333	retained_intron		8	-1	70212305	3657
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000218786	processed_transcript		10	-1	62763467	925
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000152900	protein_coding		18	-1	3327507	1297
ENSMUSG00000002346	protein_coding	Slc25a42	ENSMUST00000150706	retained_intron		8	-1	70212305	1804
ENSMUSG00000038736	protein_coding	Nudcd1	ENSMUST00000227843	protein_coding	principal2	15	-1	44427873	5077
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000130455	protein_coding		18	-1	3327507	1408
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000137568	protein_coding		18	-1	3327507	1072
ENSMUSG00000073421	protein_coding	H2-Ab1	ENSMUST00000174875	retained_intron		17	1	34268270	515
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000218552	retained_intron		10	-1	62765036	2214
ENSMUSG00000002346	protein_coding	Slc25a42	ENSMUST00000134596	retained_intron		8	-1	70212305	1946
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000146265	protein_coding		18	-1	3327507	822
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000220236	retained_intron		10	-1	62760349	589
ENSMUSG00000103840	TEC	1700040K01Rik	ENSMUST00000195145	TEC		1	1	152936604	438
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000218437	retained_intron		10	-1	62765194	3939
ENSMUSG00000038736	protein_coding	Nudcd1	ENSMUST00000038719	protein_coding	alternative2	15	-1	44428307	2600
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000219441	retained_intron		10	-1	62767124	564
ENSMUSG00000100702	processed_pseudogene	Gm8976	ENSMUST00000187136	processed_pseudogene		1	-1	152950097	703
ENSMUSG00000003778	protein_coding	Brd8	ENSMUST00000152612	retained_intron		18	-1	34624553	4335
ENSMUSG00000002346	protein_coding	Slc25a42	ENSMUST00000063788	protein_coding	principal1	8	-1	70212256	3081
ENSMUSG00000047642	protein_coding	D930020B18Rik	ENSMUST00000120642	protein_coding	principal1	10	1	121641794	3335
ENSMUSG00000003778	protein_coding	Brd8	ENSMUST00000097626	protein_coding	alternative1	18	-1	34624601	3005
ENSMUSG00000038736	protein_coding	Nudcd1	ENSMUST00000226606	nonsense_mediated_decay		15	-1	44427785	729
ENSMUSG00000098175	processed_pseudogene	Gm7545	ENSMUST00000182773	processed_pseudogene		6	1	86284887	1008
ENSMUSG00000047642	protein_coding	D930020B18Rik	ENSMUST00000132744	protein_coding		10	1	121641872	1489
ENSMUSG00000049122	protein_coding	Frmd3	ENSMUST00000098006	protein_coding		4	1	74013442	2205
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000217940	retained_intron		10	-1	62792270	3178
ENSMUSG00000108636	unprocessed_pseudogene	Gm44650	ENSMUST00000206929	unprocessed_pseudogene		7	1	128329808	194
ENSMUSG00000072940	processed_pseudogene	Gm10443	ENSMUST00000119024	processed_pseudogene		6	1	86334031	210
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000218945	retained_intron		10	-1	62771976	1078
ENSMUSG00000108608	transcribed_processed_pseudogene	Gm6916	ENSMUST00000205277	processed_transcript		7	1	128314784	828
ENSMUSG00000003778	protein_coding	Brd8	ENSMUST00000115765	protein_coding		18	-1	34624601	3869
ENSMUSG00000108608	transcribed_processed_pseudogene	Gm6916	ENSMUST00000205523	transcribed_processed_pseudogene		7	1	128340467	195
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000218229	nonsense_mediated_decay		10	-1	62792278	662
ENSMUSG00000107819	unprocessed_pseudogene	Gm18862	ENSMUST00000204643	unprocessed_pseudogene		6	1	86351851	933
ENSMUSG00000049122	protein_coding	Frmd3	ENSMUST00000154134	processed_transcript		4	1	74168937	3514
ENSMUSG00000044367	protein_coding	Slc16a13	ENSMUST00000060010	protein_coding	principal1	11	-1	70220994	2531
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000217768	protein_coding		10	-1	62792229	732
ENSMUSG00000038736	protein_coding	Nudcd1	ENSMUST00000227645	retained_intron		15	-1	44427888	2895
ENSMUSG00000003778	protein_coding	Brd8	ENSMUST00000153569	retained_intron		18	-1	34624601	3325
ENSMUSG00000038736	protein_coding	Nudcd1	ENSMUST00000227789	retained_intron		15	-1	44427859	2712
ENSMUSG00000020074	protein_coding	Ccar1	ENSMUST00000218946	protein_coding		10	-1	62792256	660
ENSMUSG00000003778	protein_coding	Brd8	ENSMUST00000145431	processed_transcript		18	-1	34624554	599
ENSMUSG00000044367	protein_coding	Slc16a13	ENSMUST00000159867	protein_coding		11	-1	70220808	360
ENSMUSG00000038736	protein_coding	Nudcd1	ENSMUST00000228319	retained_intron		15	-1	44427808	2163
ENSMUSG00000003778	protein_coding	Brd8	ENSMUST00000127159	retained_intron		18	-1	34624601	1702
ENSMUSG00000038736	protein_coding	Nudcd1	ENSMUST00000226660	retained_intron		15	-1	44427854	2231
ENSMUSG00000109543	processed_pseudogene	Gm44844	ENSMUST00000207242	processed_pseudogene		8	1	6437744	336
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000134027	nonsense_mediated_decay		18	-1	3337533	1553
ENSMUSG00000044367	protein_coding	Slc16a13	ENSMUST00000190533	protein_coding		11	-1	70221064	455
ENSMUSG00000109457	processed_pseudogene	Gm44909	ENSMUST00000208756	processed_pseudogene		8	-1	6830978	165
ENSMUSG00000044367	protein_coding	Slc16a13	ENSMUST00000141290	protein_coding		11	-1	70220784	348
ENSMUSG00000095253	protein_coding	Zfp799	ENSMUST00000202988	protein_coding	principal1	17	-1	32830261	6012
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000152108	protein_coding		18	-1	3309723	654
ENSMUSG00000042895	protein_coding	Abra	ENSMUST00000054742	protein_coding	principal1	15	-1	41869720	2979
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000136961	protein_coding	alternative1	18	-1	3309723	807
ENSMUSG00000109463	processed_pseudogene	Gm7506	ENSMUST00000207758	processed_pseudogene		8	-1	7002755	815
ENSMUSG00000074698	protein_coding	Csnk2a1	ENSMUST00000099224	protein_coding	principal1	2	1	152226839	4206
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000024810	protein_coding	principal1	17	1	29360914	2640
ENSMUSG00000061322	protein_coding	Dnaic1	ENSMUST00000102963	protein_coding	principal1	4	1	41569775	2510
ENSMUSG00000038544	protein_coding	Inip	ENSMUST00000095063	protein_coding	principal1	4	-1	59783866	3237
ENSMUSG00000095253	protein_coding	Zfp799	ENSMUST00000201876	protein_coding		17	-1	32830228	632
ENSMUSG00000022338	protein_coding	Eny2	ENSMUST00000232353	retained_intron		15	1	44428042	849
ENSMUSG00000108852	processed_pseudogene	Gm44911	ENSMUST00000208436	processed_pseudogene		8	1	7040157	1062
ENSMUSG00000038072	protein_coding	Galnt11	ENSMUST00000045737	protein_coding	principal1	5	1	25222882	2552
ENSMUSG00000095253	protein_coding	Zfp799	ENSMUST00000202759	protein_coding		17	-1	32830246	374
ENSMUSG00000038174	protein_coding	Fam126b	ENSMUST00000161600	protein_coding	principal3	1	-1	58586323	8685
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000144496	protein_coding	alternative1	18	-1	3309858	978
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000123672	protein_coding		18	-1	3325474	654
ENSMUSG00000109538	processed_pseudogene	Gm44910	ENSMUST00000208451	processed_pseudogene		8	-1	7132964	396
ENSMUSG00000038544	protein_coding	Inip	ENSMUST00000107526	protein_coding		4	-1	59783808	1438
ENSMUSG00000097048	antisense	1600020E01Rik	ENSMUST00000204068	antisense		6	1	86526247	361
ENSMUSG00000066583	protein_coding	Scgb1b27	ENSMUST00000085618	protein_coding	principal2	7	1	34021483	493
ENSMUSG00000038072	protein_coding	Galnt11	ENSMUST00000114952	protein_coding	principal1	5	1	25246373	2449
ENSMUSG00000038174	protein_coding	Fam126b	ENSMUST00000097724	protein_coding	alternative1	1	-1	58586266	4581
ENSMUSG00000040021	protein_coding	Lats1	ENSMUST00000165952	protein_coding	principal1	10	1	7681214	7209
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000145124	retained_intron		17	1	29360932	431
ENSMUSG00000038544	protein_coding	Inip	ENSMUST00000143756	protein_coding		4	-1	59801589	434
ENSMUSG00000095253	protein_coding	Zfp799	ENSMUST00000201499	protein_coding		17	-1	32830215	651
ENSMUSG00000066583	protein_coding	Scgb1b27	ENSMUST00000173387	protein_coding	alternative2	7	1	34021567	762
ENSMUSG00000061322	protein_coding	Dnaic1	ENSMUST00000143198	retained_intron		4	1	41631644	965
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000146800	retained_intron		17	1	29360942	1191
ENSMUSG00000061322	protein_coding	Dnaic1	ENSMUST00000119127	protein_coding		4	1	41633348	500
ENSMUSG00000038072	protein_coding	Galnt11	ENSMUST00000144971	protein_coding		5	1	25246783	469
ENSMUSG00000095253	protein_coding	Zfp799	ENSMUST00000179695	protein_coding		17	-1	32822200	5833
ENSMUSG00000117675	processed_pseudogene	Gm46644	ENSMUST00000236252	processed_pseudogene		19	1	41902889	313
ENSMUSG00000040021	protein_coding	Lats1	ENSMUST00000217931	protein_coding	principal1	10	1	7691247	4186
ENSMUSG00000038544	protein_coding	Inip	ENSMUST00000128548	processed_transcript		4	-1	59783838	1654
ENSMUSG00000074698	protein_coding	Csnk2a1	ENSMUST00000136063	retained_intron		2	1	152226876	1559
ENSMUSG00000038072	protein_coding	Galnt11	ENSMUST00000114950	protein_coding	principal1	5	1	25247363	2493
ENSMUSG00000037492	protein_coding	Zmat4	ENSMUST00000131410	protein_coding		8	1	23636019	367
ENSMUSG00000083434	processed_pseudogene	Gm12760	ENSMUST00000117861	processed_pseudogene		7	-1	34037432	482
ENSMUSG00000109377	unprocessed_pseudogene	Gm7397	ENSMUST00000208298	unprocessed_pseudogene		8	1	4018992	361
ENSMUSG00000038544	protein_coding	Inip	ENSMUST00000138097	processed_transcript		4	-1	59783849	1450
ENSMUSG00000038174	protein_coding	Fam126b	ENSMUST00000187717	nonsense_mediated_decay		1	-1	58565954	3860
ENSMUSG00000074698	protein_coding	Csnk2a1	ENSMUST00000124791	protein_coding		2	1	152226896	600
ENSMUSG00000040021	protein_coding	Lats1	ENSMUST00000040043	protein_coding	principal1	10	1	7691247	4155
ENSMUSG00000092603	processed_pseudogene	Gm20386	ENSMUST00000174010	processed_pseudogene		6	1	110738350	132
ENSMUSG00000080947	processed_pseudogene	Gm12779	ENSMUST00000121496	processed_pseudogene		7	-1	34068697	143
ENSMUSG00000097030	antisense	Gm26693	ENSMUST00000181318	antisense		17	1	32810144	1021
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000139537	protein_coding		18	-1	3281101	807
ENSMUSG00000087054	antisense	Gm12405	ENSMUST00000141120	antisense		4	1	41642185	660
ENSMUSG00000074698	protein_coding	Csnk2a1	ENSMUST00000133119	protein_coding		2	1	152226908	466
ENSMUSG00000045508	protein_coding	Olfr1367	ENSMUST00000059216	protein_coding	principal1	13	1	21346910	1055
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000148305	nonsense_mediated_decay		18	-1	3325474	598
ENSMUSG00000038174	protein_coding	Fam126b	ENSMUST00000038372	protein_coding	principal3	1	-1	58586191	2385
ENSMUSG00000109512	processed_pseudogene	Gm45049	ENSMUST00000207586	processed_pseudogene		8	-1	4034747	591
ENSMUSG00000109255	processed_pseudogene	Gm7407	ENSMUST00000208301	processed_pseudogene		8	-1	4040421	568
ENSMUSG00000074698	protein_coding	Csnk2a1	ENSMUST00000141597	retained_intron		2	1	152226913	2520
ENSMUSG00000097363	lincRNA	Gm26717	ENSMUST00000181713	lincRNA		18	1	32153476	1418
ENSMUSG00000038174	protein_coding	Fam126b	ENSMUST00000161000	protein_coding		1	-1	58586275	390
ENSMUSG00000091957	transcribed_processed_pseudogene	Rps2-ps10	ENSMUST00000170335	processed_transcript		18	-1	61259972	965
ENSMUSG00000091957	transcribed_processed_pseudogene	Rps2-ps10	ENSMUST00000076842	transcribed_processed_pseudogene		18	-1	61259961	879
ENSMUSG00000074482	processed_pseudogene	Gm16589	ENSMUST00000159522	processed_pseudogene		8	1	4087658	918
ENSMUSG00000022338	protein_coding	Eny2	ENSMUST00000226355	nonsense_mediated_decay		15	1	44428092	767
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000154705	protein_coding		18	-1	3281738	529
ENSMUSG00000005267	protein_coding	Zfp287	ENSMUST00000150336	protein_coding		11	-1	62731885	1605
ENSMUSG00000099510	antisense	Gm28501	ENSMUST00000188729	antisense		1	1	138515615	421
ENSMUSG00000056755	protein_coding	Grm7	ENSMUST00000174018	nonsense_mediated_decay		6	1	110645581	4210
ENSMUSG00000038174	protein_coding	Fam126b	ENSMUST00000160546	processed_transcript		1	-1	58586264	421
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000126578	protein_coding	alternative1	18	-1	3299452	915
ENSMUSG00000102651	TEC	Gm37080	ENSMUST00000194804	TEC		1	-1	138554708	2404
ENSMUSG00000038174	protein_coding	Fam126b	ENSMUST00000159980	retained_intron		1	-1	58586277	348
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000154715	protein_coding	alternative1	18	-1	3309900	1167
ENSMUSG00000038174	protein_coding	Fam126b	ENSMUST00000191472	retained_intron		1	-1	58565220	2790
ENSMUSG00000102448	TEC	Gm37101	ENSMUST00000191656	TEC		1	-1	138571356	3660
ENSMUSG00000005267	protein_coding	Zfp287	ENSMUST00000149228	nonsense_mediated_decay		11	-1	62728673	3391
ENSMUSG00000038174	protein_coding	Fam126b	ENSMUST00000159185	retained_intron		1	-1	58586297	437
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000123989	nonsense_mediated_decay		17	1	29360942	2776
ENSMUSG00000092518	protein_coding	Fam71e2	ENSMUST00000163574	nonsense_mediated_decay		7	-1	4771302	2744
ENSMUSG00000005267	protein_coding	Zfp287	ENSMUST00000005399	protein_coding	alternative2	11	-1	62729093	3220
ENSMUSG00000011752	protein_coding	Pgam1	ENSMUST00000011896	protein_coding	principal1	19	1	41911923	1775
ENSMUSG00000085054	lincRNA	Gm15834	ENSMUST00000160947	lincRNA		1	1	58505148	2126
ENSMUSG00000005267	protein_coding	Zfp287	ENSMUST00000128370	protein_coding		11	-1	62728671	2062
ENSMUSG00000068604	processed_pseudogene	Gm8225	ENSMUST00000090257	processed_pseudogene		17	1	26542760	879
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000234163	nonsense_mediated_decay		17	1	29360973	708
ENSMUSG00000118368	processed_pseudogene	Gm50274	ENSMUST00000235820	processed_pseudogene		17	-1	26525293	227
ENSMUSG00000011752	protein_coding	Pgam1	ENSMUST00000237510	processed_transcript		19	1	41912038	617
ENSMUSG00000085054	lincRNA	Gm15834	ENSMUST00000129740	lincRNA		1	1	58505152	2097
ENSMUSG00000011752	protein_coding	Pgam1	ENSMUST00000235468	retained_intron		19	1	41912076	593
ENSMUSG00000022554	protein_coding	Hgh1	ENSMUST00000023213	protein_coding	principal1	15	1	76368898	1993
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000149266	processed_transcript		18	-1	3299541	842
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000038859	protein_coding	alternative1	4	-1	149698698	4905
ENSMUSG00000026592	protein_coding	Tex35	ENSMUST00000118207	protein_coding	principal3	1	-1	157108650	912
ENSMUSG00000005267	protein_coding	Zfp287	ENSMUST00000127732	retained_intron		11	-1	62731905	2403
ENSMUSG00000000303	protein_coding	Cdh1	ENSMUST00000000312	protein_coding	principal1	8	1	106603351	4430
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000130047	retained_intron		18	-1	3299556	953
ENSMUSG00000005267	protein_coding	Zfp287	ENSMUST00000185656	protein_coding	principal2	11	-1	62728666	3370
ENSMUSG00000085054	lincRNA	Gm15834	ENSMUST00000139825	lincRNA		1	1	58505155	2613
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000156929	processed_transcript		18	-1	3299554	290
ENSMUSG00000022554	protein_coding	Hgh1	ENSMUST00000229212	processed_transcript		15	1	76369481	343
ENSMUSG00000026592	protein_coding	Tex35	ENSMUST00000027884	protein_coding	alternative2	1	-1	157108650	909
ENSMUSG00000022554	protein_coding	Hgh1	ENSMUST00000230320	retained_intron		15	1	76369482	611
ENSMUSG00000092518	protein_coding	Fam71e2	ENSMUST00000174409	protein_coding	principal1	7	-1	4771302	2716
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000235007	retained_intron		17	1	29365416	2077
ENSMUSG00000009614	protein_coding	Sardh	ENSMUST00000102886	protein_coding	principal1	2	-1	27247266	4521
ENSMUSG00000026592	protein_coding	Tex35	ENSMUST00000187546	protein_coding	alternative2	1	-1	157108649	856
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000138537	retained_intron		17	1	29365450	621
ENSMUSG00000022338	protein_coding	Eny2	ENSMUST00000226827	protein_coding	alternative1	15	1	44428092	558
ENSMUSG00000078752	protein_coding	Scgb1b30	ENSMUST00000108083	protein_coding	principal1	7	1	34095431	491
ENSMUSG00000061988	processed_pseudogene	Rpl10a-ps2	ENSMUST00000071184	processed_pseudogene		13	-1	8940977	642
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000137644	protein_coding		17	1	29368967	1451
ENSMUSG00000009614	protein_coding	Sardh	ENSMUST00000142136	retained_intron		2	-1	27192260	830
ENSMUSG00000009614	protein_coding	Sardh	ENSMUST00000156434	processed_transcript		2	-1	27209937	770
ENSMUSG00000022338	protein_coding	Eny2	ENSMUST00000227425	nonsense_mediated_decay		15	1	44428108	502
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000140918	retained_intron		17	1	29368979	662
ENSMUSG00000009614	protein_coding	Sardh	ENSMUST00000127805	retained_intron		2	-1	27218984	702
ENSMUSG00000000303	protein_coding	Cdh1	ENSMUST00000136580	processed_transcript		8	1	106604143	789
ENSMUSG00000009614	protein_coding	Sardh	ENSMUST00000147089	processed_transcript		2	-1	27215632	352
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000235065	retained_intron		17	1	29373351	418
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000234838	retained_intron		17	1	29376225	1586
ENSMUSG00000009614	protein_coding	Sardh	ENSMUST00000144448	retained_intron		2	-1	27225192	524
ENSMUSG00000026592	protein_coding	Tex35	ENSMUST00000121911	protein_coding	alternative2	1	-1	157108680	805
ENSMUSG00000097048	antisense	1600020E01Rik	ENSMUST00000204008	antisense		6	1	86526247	713
ENSMUSG00000024013	protein_coding	Fgd2	ENSMUST00000144616	processed_transcript		17	1	29376501	512
ENSMUSG00000000303	protein_coding	Cdh1	ENSMUST00000167688	protein_coding	principal1	8	1	106603379	3203
ENSMUSG00000022338	protein_coding	Eny2	ENSMUST00000060652	protein_coding	principal2	15	1	44428111	3000
ENSMUSG00000075297	protein_coding	H60b	ENSMUST00000131558	protein_coding	principal1	10	1	22273346	1080
ENSMUSG00000026592	protein_coding	Tex35	ENSMUST00000119526	protein_coding	alternative2	1	-1	157108388	679
ENSMUSG00000097048	antisense	1600020E01Rik	ENSMUST00000180896	antisense		6	1	86526271	2099
ENSMUSG00000097048	antisense	1600020E01Rik	ENSMUST00000204738	antisense		6	1	86526810	1997
ENSMUSG00000075297	protein_coding	H60b	ENSMUST00000105522	protein_coding	principal1	10	1	22158586	1029
ENSMUSG00000038390	protein_coding	Gpr162	ENSMUST00000046893	protein_coding	principal1	6	-1	124863917	2676
ENSMUSG00000057497	protein_coding	Fam136a	ENSMUST00000071492	protein_coding	principal1	6	1	86365646	1643
ENSMUSG00000022338	protein_coding	Eny2	ENSMUST00000226336	nonsense_mediated_decay		15	1	44428115	2547
ENSMUSG00000056755	protein_coding	Grm7	ENSMUST00000071076	protein_coding	alternative1	6	1	110645581	3127
ENSMUSG00000097048	antisense	1600020E01Rik	ENSMUST00000204047	antisense		6	1	86527319	594
ENSMUSG00000025505	protein_coding	Tmem80	ENSMUST00000155657	processed_transcript		7	1	141327739	905
ENSMUSG00000022338	protein_coding	Eny2	ENSMUST00000228130	nonsense_mediated_decay		15	1	44428127	654
ENSMUSG00000015127	protein_coding	Unkl	ENSMUST00000039734	protein_coding	principal1	17	1	25188397	4779
ENSMUSG00000009614	protein_coding	Sardh	ENSMUST00000149733	protein_coding		2	-1	27246848	731
ENSMUSG00000057497	protein_coding	Fam136a	ENSMUST00000203237	retained_intron		6	1	86365714	1306
ENSMUSG00000097048	antisense	1600020E01Rik	ENSMUST00000181928	antisense		6	1	86527401	609
ENSMUSG00000022338	protein_coding	Eny2	ENSMUST00000228474	retained_intron		15	1	44428147	2708
ENSMUSG00000056755	protein_coding	Grm7	ENSMUST00000172951	protein_coding	principal3	6	1	110645582	4197
ENSMUSG00000057497	protein_coding	Fam136a	ENSMUST00000204893	nonsense_mediated_decay		6	1	86365724	448
ENSMUSG00000097048	antisense	1600020E01Rik	ENSMUST00000205028	antisense		6	1	86527474	329
ENSMUSG00000022338	protein_coding	Eny2	ENSMUST00000232045	retained_intron		15	1	44433160	848
ENSMUSG00000015127	protein_coding	Unkl	ENSMUST00000160896	protein_coding		17	1	25188914	4787
ENSMUSG00000038390	protein_coding	Gpr162	ENSMUST00000204161	retained_intron		6	-1	124863712	3564
ENSMUSG00000009614	protein_coding	Sardh	ENSMUST00000139312	protein_coding		2	-1	27248337	759
ENSMUSG00000022338	protein_coding	Eny2	ENSMUST00000228372	retained_intron		15	1	44433545	684
ENSMUSG00000038390	protein_coding	Gpr162	ENSMUST00000204667	protein_coding	principal1	6	-1	124863983	2855
ENSMUSG00000056755	protein_coding	Grm7	ENSMUST00000173001	protein_coding		6	1	111495715	418
ENSMUSG00000009614	protein_coding	Sardh	ENSMUST00000129975	protein_coding		2	-1	27247414	355
ENSMUSG00000097048	antisense	1600020E01Rik	ENSMUST00000204663	antisense		6	1	86547981	2007
ENSMUSG00000015127	protein_coding	Unkl	ENSMUST00000160785	nonsense_mediated_decay		17	1	25189464	745
ENSMUSG00000038390	protein_coding	Gpr162	ENSMUST00000204253	processed_transcript		6	-1	124863712	486
ENSMUSG00000104668	processed_pseudogene	Vmn2r-ps24	ENSMUST00000199364	processed_pseudogene		5	1	138532077	858
ENSMUSG00000056755	protein_coding	Grm7	ENSMUST00000174310	protein_coding		6	1	111495744	386
ENSMUSG00000118172	lincRNA	Gm50414	ENSMUST00000235996	lincRNA		18	-1	81648941	515
ENSMUSG00000091192	antisense	Sardhos	ENSMUST00000170435	antisense		2	1	27189382	265
ENSMUSG00000015127	protein_coding	Unkl	ENSMUST00000162838	retained_intron		17	1	25210685	534
ENSMUSG00000024575	protein_coding	Pde6a	ENSMUST00000025468	protein_coding	principal1	18	1	61220315	4588
ENSMUSG00000026592	protein_coding	Tex35	ENSMUST00000148649	nonsense_mediated_decay		1	-1	157108645	820
ENSMUSG00000118363	lincRNA	Gm50290	ENSMUST00000237829	lincRNA		18	1	81708536	263
ENSMUSG00000015127	protein_coding	Unkl	ENSMUST00000162498	protein_coding		17	1	25222539	487
ENSMUSG00000092448	antisense	Gm20387	ENSMUST00000173609	antisense		6	-1	110645916	1783
ENSMUSG00000024575	protein_coding	Pde6a	ENSMUST00000135688	protein_coding		18	1	61275023	2263
ENSMUSG00000106136	lincRNA	4933408A14Rik	ENSMUST00000199037	lincRNA		5	1	72644410	729
ENSMUSG00000118073	lincRNA	Gm50291	ENSMUST00000235735	lincRNA		18	1	81722189	614
ENSMUSG00000066090	protein_coding	Insl5	ENSMUST00000084382	protein_coding	principal3	4	-1	103026737	695
ENSMUSG00000025505	protein_coding	Tmem80	ENSMUST00000126510	protein_coding	principal1	7	1	141327888	959
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000123135	processed_transcript		10	1	13090691	478
ENSMUSG00000062014	protein_coding	Gmfb	ENSMUST00000111817	protein_coding	principal1	14	-1	46822242	4171
ENSMUSG00000066090	protein_coding	Insl5	ENSMUST00000106869	protein_coding	alternative2	4	-1	103026842	438
ENSMUSG00000062014	protein_coding	Gmfb	ENSMUST00000226937	protein_coding		14	-1	46822184	761
ENSMUSG00000025505	protein_coding	Tmem80	ENSMUST00000145184	protein_coding		7	1	141327888	1805
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000135095	processed_transcript		10	1	13090712	512
ENSMUSG00000015127	protein_coding	Unkl	ENSMUST00000015271	protein_coding		17	1	25222582	3414
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000149803	protein_coding		18	-1	3337589	1422
ENSMUSG00000062014	protein_coding	Gmfb	ENSMUST00000226333	protein_coding		14	-1	46818419	739
ENSMUSG00000100837	lincRNA	1700063D05Rik	ENSMUST00000213914	lincRNA		9	1	41192446	1007
ENSMUSG00000100837	lincRNA	1700063D05Rik	ENSMUST00000214568	lincRNA		9	1	41196096	990
ENSMUSG00000025505	protein_coding	Tmem80	ENSMUST00000133012	protein_coding	principal1	7	1	141328130	1524
ENSMUSG00000036892	protein_coding	Prodh2	ENSMUST00000058280	protein_coding	principal1	7	1	30493622	1853
ENSMUSG00000118277	transcribed_processed_pseudogene	Gm50310	ENSMUST00000236846	transcribed_processed_pseudogene		19	-1	24147224	328
ENSMUSG00000025505	protein_coding	Tmem80	ENSMUST00000026578	protein_coding	principal1	7	1	141328130	1800
ENSMUSG00000118371	processed_pseudogene	Gm50308	ENSMUST00000237530	processed_pseudogene		19	1	24154070	532
ENSMUSG00000062014	protein_coding	Gmfb	ENSMUST00000228065	processed_transcript		14	-1	46822156	280
ENSMUSG00000015127	protein_coding	Unkl	ENSMUST00000161679	processed_transcript		17	1	25222779	1053
ENSMUSG00000037492	protein_coding	Zmat4	ENSMUST00000042352	protein_coding	principal1	8	1	23669658	4182
ENSMUSG00000062014	protein_coding	Gmfb	ENSMUST00000228515	retained_intron		14	-1	46816139	786
ENSMUSG00000081459	processed_pseudogene	Llph-ps1	ENSMUST00000121281	processed_pseudogene		4	-1	116200952	390
ENSMUSG00000037492	protein_coding	Zmat4	ENSMUST00000123412	nonsense_mediated_decay		8	1	23669658	2272
ENSMUSG00000100837	lincRNA	1700063D05Rik	ENSMUST00000185590	lincRNA		9	1	41206137	664
ENSMUSG00000072686	lincRNA	Gm10398	ENSMUST00000100826	lincRNA		14	1	24909414	397
ENSMUSG00000025505	protein_coding	Tmem80	ENSMUST00000128649	processed_transcript		7	1	141328160	669
ENSMUSG00000026917	protein_coding	Wdr5	ENSMUST00000144315	processed_transcript		2	1	27515157	798
ENSMUSG00000036892	protein_coding	Prodh2	ENSMUST00000133318	protein_coding		7	1	30493658	765
ENSMUSG00000037492	protein_coding	Zmat4	ENSMUST00000208021	retained_intron		8	1	23669661	2373
ENSMUSG00000114416	TEC	Gm47907	ENSMUST00000224831	TEC		14	1	25031097	573
ENSMUSG00000025505	protein_coding	Tmem80	ENSMUST00000128906	protein_coding		7	1	141333314	1387
ENSMUSG00000112616	TEC	Gm47434	ENSMUST00000218937	TEC		10	-1	118835106	2519
ENSMUSG00000037492	protein_coding	Zmat4	ENSMUST00000207301	protein_coding		8	1	23669674	4207
ENSMUSG00000100837	lincRNA	1700063D05Rik	ENSMUST00000191461	lincRNA		9	1	41210706	666
ENSMUSG00000098292	lincRNA	Gm27194	ENSMUST00000175753	lincRNA		11	1	62749852	2936
ENSMUSG00000062014	protein_coding	Gmfb	ENSMUST00000145958	processed_transcript		14	-1	46819575	610
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000142690	protein_coding		18	-1	3337574	1256
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000207474	processed_transcript		11	-1	62760557	1489
ENSMUSG00000100837	lincRNA	1700063D05Rik	ENSMUST00000188499	lincRNA		9	1	41216948	301
ENSMUSG00000062014	protein_coding	Gmfb	ENSMUST00000226842	retained_intron		14	-1	46817793	2596
ENSMUSG00000114924	lincRNA	Gm38408	ENSMUST00000224815	lincRNA		14	-1	25074444	2630
ENSMUSG00000025505	protein_coding	Tmem80	ENSMUST00000132061	protein_coding	principal1	7	1	141333381	667
ENSMUSG00000067001	protein_coding	Serpinb7	ENSMUST00000154538	protein_coding		1	1	107399655	380
ENSMUSG00000037492	protein_coding	Zmat4	ENSMUST00000135747	protein_coding		8	1	23700821	454
ENSMUSG00000114855	processed_pseudogene	Gm47909	ENSMUST00000224878	processed_pseudogene		14	-1	25090406	468
ENSMUSG00000036892	protein_coding	Prodh2	ENSMUST00000142514	processed_transcript		7	1	30493658	1392
ENSMUSG00000002732	protein_coding	Fkbp7	ENSMUST00000002809	protein_coding	principal1	2	-1	76673070	860
ENSMUSG00000037492	protein_coding	Zmat4	ENSMUST00000146774	retained_intron		8	1	23929053	348
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000124252	processed_transcript		10	1	13090788	424
ENSMUSG00000036892	protein_coding	Prodh2	ENSMUST00000131789	retained_intron		7	1	30493659	549
ENSMUSG00000046351	protein_coding	Zfp322a	ENSMUST00000050101	protein_coding	principal1	13	-1	23369208	4844
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000132334	processed_transcript		18	-1	3337063	609
ENSMUSG00000078593	protein_coding	1700042G07Rik	ENSMUST00000106492	protein_coding	principal1	4	1	116173372	385
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000025069	protein_coding	alternative1	18	-1	3337589	2931
ENSMUSG00000025505	protein_coding	Tmem80	ENSMUST00000134221	retained_intron		7	1	141333658	749
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000165086	protein_coding	alternative1	18	-1	3337589	2778
ENSMUSG00000002732	protein_coding	Fkbp7	ENSMUST00000154097	processed_transcript		2	-1	76665243	418
ENSMUSG00000036892	protein_coding	Prodh2	ENSMUST00000142575	protein_coding		7	1	30493659	878
ENSMUSG00000063889	protein_coding	Crem	ENSMUST00000082141	protein_coding	alternative1	18	-1	3337589	2820
ENSMUSG00000002732	protein_coding	Fkbp7	ENSMUST00000176815	nonsense_mediated_decay		2	-1	76673116	683
ENSMUSG00000062014	protein_coding	Gmfb	ENSMUST00000079314	protein_coding	principal1	14	-1	46822242	4171
ENSMUSG00000078452	protein_coding	Raet1d	ENSMUST00000182677	protein_coding	principal1	10	1	22360552	1425
ENSMUSG00000036892	protein_coding	Prodh2	ENSMUST00000130839	nonsense_mediated_decay		7	1	30493681	754
ENSMUSG00000002732	protein_coding	Fkbp7	ENSMUST00000147355	retained_intron		2	-1	76673085	767
ENSMUSG00000046351	protein_coding	Zfp322a	ENSMUST00000152557	protein_coding		13	-1	23369000	986
ENSMUSG00000078452	protein_coding	Raet1d	ENSMUST00000095795	protein_coding	principal1	10	1	22361894	1271
ENSMUSG00000036892	protein_coding	Prodh2	ENSMUST00000131040	protein_coding		7	1	30493780	780
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000121646	protein_coding	principal2	10	1	13090788	5260
ENSMUSG00000111410	protein_coding	Gm49337	ENSMUST00000216692	protein_coding	principal1	4	1	116173384	1535
ENSMUSG00000100753	unprocessed_pseudogene	Gm29435	ENSMUST00000191310	unprocessed_pseudogene		Y	-1	3991881	689
ENSMUSG00000025050	protein_coding	Pcgf6	ENSMUST00000026032	protein_coding	principal1	19	-1	47050904	2159
ENSMUSG00000036892	protein_coding	Prodh2	ENSMUST00000122876	protein_coding		7	1	30506771	591
ENSMUSG00000097053	unprocessed_pseudogene	Gm1972	ENSMUST00000181606	unprocessed_pseudogene		10	1	22224280	964
ENSMUSG00000097586	processed_pseudogene	Gm26528	ENSMUST00000181965	processed_pseudogene		10	-1	22281736	283
ENSMUSG00000097705	antisense	Gm26740	ENSMUST00000180456	antisense		10	-1	22302512	358
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000151060	retained_intron		6	1	14901388	2877
ENSMUSG00000097705	antisense	Gm26740	ENSMUST00000181532	antisense		10	-1	22302835	1531
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000204869	processed_transcript		6	1	14901451	2849
ENSMUSG00000025050	protein_coding	Pcgf6	ENSMUST00000235633	nonsense_mediated_decay		19	-1	47050906	2068
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000207597	protein_coding		11	-1	62789421	1668
ENSMUSG00000097357	bidirectional_promoter_lncRNA	Gm16793	ENSMUST00000181322	bidirectional_promoter_lncRNA		8	-1	35588972	1680
ENSMUSG00000013822	protein_coding	Elof1	ENSMUST00000166335	protein_coding	principal1	9	-1	22114169	1053
ENSMUSG00000046351	protein_coding	Zfp322a	ENSMUST00000145451	protein_coding		13	-1	23369201	1261
ENSMUSG00000067001	protein_coding	Serpinb7	ENSMUST00000086690	protein_coding	principal1	1	1	107422689	1887
ENSMUSG00000025050	protein_coding	Pcgf6	ENSMUST00000235370	processed_transcript		19	-1	47049487	2004
ENSMUSG00000085853	antisense	Gm12167	ENSMUST00000148132	antisense		11	1	46342287	578
ENSMUSG00000025050	protein_coding	Pcgf6	ENSMUST00000236339	retained_intron		19	-1	47050890	2832
ENSMUSG00000046351	protein_coding	Zfp322a	ENSMUST00000125328	protein_coding		13	-1	23369194	815
ENSMUSG00000118254	lincRNA	Gm46614	ENSMUST00000236148	lincRNA		18	1	81772059	1517
ENSMUSG00000046351	protein_coding	Zfp322a	ENSMUST00000224779	processed_transcript		13	-1	23363210	488
ENSMUSG00000026393	protein_coding	Nek7	ENSMUST00000186017	protein_coding	principal1	1	-1	138619749	5258
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000105690	protein_coding	principal4	4	-1	149698708	4921
ENSMUSG00000117892	lincRNA	Gm30454	ENSMUST00000237663	lincRNA		18	-1	81850016	543
ENSMUSG00000095128	unprocessed_pseudogene	Gm5709	ENSMUST00000177879	unprocessed_pseudogene		3	-1	59635733	1165
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000141101	protein_coding		5	1	115845644	6794
ENSMUSG00000070056	protein_coding	Mfhas1	ENSMUST00000037666	protein_coding	principal1	8	1	35587798	6408
ENSMUSG00000046351	protein_coding	Zfp322a	ENSMUST00000223795	retained_intron		13	-1	23368211	965
ENSMUSG00000102480	TEC	Gm37926	ENSMUST00000191922	TEC		3	1	59662858	2424
ENSMUSG00000117817	lincRNA	Gm50292	ENSMUST00000235452	lincRNA		18	-1	81916728	957
ENSMUSG00000083667	processed_pseudogene	Gm11334	ENSMUST00000121969	processed_pseudogene		13	1	23382505	156
ENSMUSG00000026393	protein_coding	Nek7	ENSMUST00000187407	protein_coding	principal1	1	-1	138620141	4336
ENSMUSG00000070056	protein_coding	Mfhas1	ENSMUST00000209953	protein_coding		8	1	35588956	2549
ENSMUSG00000117923	lincRNA	Gm30593	ENSMUST00000236553	lincRNA		18	1	81933907	1177
ENSMUSG00000026393	protein_coding	Nek7	ENSMUST00000027642	protein_coding		1	-1	138619674	3737
ENSMUSG00000087097	antisense	4930586N03Rik	ENSMUST00000122940	antisense		13	1	23313525	881
ENSMUSG00000028698	protein_coding	Pik3r3	ENSMUST00000147292	protein_coding		4	1	116221618	707
ENSMUSG00000108914	processed_pseudogene	Gm44908	ENSMUST00000208610	processed_pseudogene		8	1	7231234	266
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000139798	processed_transcript		11	-1	62788980	443
ENSMUSG00000118278	TEC	Gm50293	ENSMUST00000236169	TEC		18	1	81995834	916
ENSMUSG00000070056	protein_coding	Mfhas1	ENSMUST00000154989	processed_transcript		8	1	35607277	676
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000138105	processed_transcript		11	-1	62760558	2391
ENSMUSG00000117913	lincRNA	Gm50294	ENSMUST00000237813	lincRNA		18	-1	82258510	727
ENSMUSG00000102390	processed_pseudogene	Gm37579	ENSMUST00000194291	processed_pseudogene		3	-1	59737317	142
ENSMUSG00000092092	lincRNA	Gm17215	ENSMUST00000170074	lincRNA		8	1	7381015	277
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000122059	protein_coding	alternative1	4	-1	149701590	4832
ENSMUSG00000026393	protein_coding	Nek7	ENSMUST00000191549	retained_intron		1	-1	138619704	2648
ENSMUSG00000104471	processed_pseudogene	Gm38208	ENSMUST00000192476	processed_pseudogene		3	-1	59736859	114
ENSMUSG00000117691	processed_pseudogene	Gm50319	ENSMUST00000236010	processed_pseudogene		19	-1	47055248	744
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000051704	protein_coding	principal2	5	1	115845644	9514
ENSMUSG00000109260	lincRNA	Gm30954	ENSMUST00000208715	lincRNA		8	-1	7580205	1210
ENSMUSG00000013822	protein_coding	Elof1	ENSMUST00000013966	protein_coding	principal1	9	-1	22117172	888
ENSMUSG00000099890	processed_transcript	Gm28262	ENSMUST00000185463	lincRNA		8	1	7855847	477
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000054654	protein_coding	principal1	11	-1	62789462	3051
ENSMUSG00000097310	lincRNA	A930038B10Rik	ENSMUST00000180412	lincRNA		14	1	34759402	4084
ENSMUSG00000099890	processed_transcript	Gm28262	ENSMUST00000192596	TEC		8	1	7857876	5531
ENSMUSG00000097310	lincRNA	A930038B10Rik	ENSMUST00000181044	lincRNA		14	1	34760227	3415
ENSMUSG00000109316	TEC	Gm45160	ENSMUST00000207112	TEC		8	1	7985368	3099
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000129989	retained_intron		10	1	13090832	712
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000112008	protein_coding	alternative2	5	1	115846371	6087
ENSMUSG00000090527	protein_coding	Aadacl2fm2	ENSMUST00000168156	protein_coding	principal1	3	1	59729790	1235
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000108705	protein_coding		11	-1	62789423	1979
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000102560	protein_coding	alternative1	5	1	115846371	6213
ENSMUSG00000013822	protein_coding	Elof1	ENSMUST00000216837	protein_coding	principal1	9	-1	22114300	864
ENSMUSG00000115109	lincRNA	Gm49032	ENSMUST00000228194	lincRNA		14	-1	34770055	1100
ENSMUSG00000024384	protein_coding	Iws1	ENSMUST00000025243	protein_coding	principal2	18	1	32067741	9613
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000153407	processed_transcript		5	1	115846461	293
ENSMUSG00000097352	transcribed_unprocessed_pseudogene	C920009B18Rik	ENSMUST00000181223	processed_transcript		10	1	22306702	4535
ENSMUSG00000097352	transcribed_unprocessed_pseudogene	C920009B18Rik	ENSMUST00000181643	processed_transcript		10	1	22306702	1004
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000118704	protein_coding	alternative1	4	-1	149676044	4894
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000127976	retained_intron		5	1	115850978	561
ENSMUSG00000013822	protein_coding	Elof1	ENSMUST00000214394	protein_coding	principal1	9	-1	22117123	567
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000202734	retained_intron		5	1	115886418	1184
ENSMUSG00000097352	transcribed_unprocessed_pseudogene	C920009B18Rik	ENSMUST00000180457	processed_transcript		10	1	22306704	2101
ENSMUSG00000097352	transcribed_unprocessed_pseudogene	C920009B18Rik	ENSMUST00000181733	transcribed_unprocessed_pseudogene		10	1	22307208	123
ENSMUSG00000024384	protein_coding	Iws1	ENSMUST00000212675	protein_coding	alternative2	18	1	32067768	2936
ENSMUSG00000013822	protein_coding	Elof1	ENSMUST00000213233	protein_coding	principal1	9	-1	22117086	810
ENSMUSG00000037892	protein_coding	Pcdh18	ENSMUST00000035931	protein_coding	principal1	3	-1	49757316	5168
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000128702	retained_intron		5	1	115907470	756
ENSMUSG00000097108	lincRNA	Gm26581	ENSMUST00000181953	lincRNA		10	1	22212653	4479
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000152602	processed_transcript		11	-1	62789417	679
ENSMUSG00000071528	protein_coding	Atp5md	ENSMUST00000235771	protein_coding	principal1	19	-1	47090625	2733
ENSMUSG00000097245	processed_pseudogene	Gm5421	ENSMUST00000181698	processed_pseudogene		10	1	22343439	2354
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000149230	processed_transcript		11	-1	62784151	641
ENSMUSG00000013663	protein_coding	Pten	ENSMUST00000013807	protein_coding	principal1	19	1	32757497	8292
ENSMUSG00000097295	processed_pseudogene	Hmgb1-ps8	ENSMUST00000181542	processed_pseudogene		10	-1	22263367	626
ENSMUSG00000017453	protein_coding	Pipox	ENSMUST00000017597	protein_coding	principal1	11	-1	77894096	1998
ENSMUSG00000024384	protein_coding	Iws1	ENSMUST00000212115	retained_intron		18	1	32067794	4329
ENSMUSG00000024384	protein_coding	Iws1	ENSMUST00000212104	retained_intron		18	1	32067802	624
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000140072	processed_transcript		11	-1	62789386	705
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000105688	protein_coding	alternative1	4	-1	149698605	4335
ENSMUSG00000013663	protein_coding	Pten	ENSMUST00000140014	retained_intron		19	1	32757595	4086
ENSMUSG00000029526	protein_coding	1700123K08Rik	ENSMUST00000031501	protein_coding	principal1	5	-1	138564694	1047
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000145474	processed_transcript		11	-1	62789409	641
ENSMUSG00000024384	protein_coding	Iws1	ENSMUST00000212280	nonsense_mediated_decay		18	1	32070158	683
ENSMUSG00000071528	protein_coding	Atp5md	ENSMUST00000096014	protein_coding	principal1	19	-1	47090643	362
ENSMUSG00000013663	protein_coding	Pten	ENSMUST00000154806	retained_intron		19	1	32811225	922
ENSMUSG00000047342	protein_coding	Zfp286	ENSMUST00000149215	processed_transcript		11	-1	62789423	678
ENSMUSG00000037892	protein_coding	Pcdh18	ENSMUST00000191794	protein_coding		3	-1	49757285	5146
ENSMUSG00000017453	protein_coding	Pipox	ENSMUST00000151383	retained_intron		11	-1	77882686	840
ENSMUSG00000024384	protein_coding	Iws1	ENSMUST00000213074	nonsense_mediated_decay		18	1	32083266	716
ENSMUSG00000086674	antisense	Zfp286os	ENSMUST00000128292	antisense		11	1	62761236	713
ENSMUSG00000037892	protein_coding	Pcdh18	ENSMUST00000193600	processed_transcript		3	-1	49757325	545
ENSMUSG00000024384	protein_coding	Iws1	ENSMUST00000212458	protein_coding		18	1	32088261	1078
ENSMUSG00000017453	protein_coding	Pipox	ENSMUST00000155401	processed_transcript		11	-1	77884544	674
ENSMUSG00000071528	protein_coding	Atp5md	ENSMUST00000237720	nonsense_mediated_decay		19	-1	47090634	425
ENSMUSG00000113774	bidirectional_promoter_lncRNA	Gm36236	ENSMUST00000220780	bidirectional_promoter_lncRNA		12	-1	24975554	701
ENSMUSG00000084020	processed_pseudogene	Wsb2-ps	ENSMUST00000117937	processed_pseudogene		11	-1	62751280	1217
ENSMUSG00000037892	protein_coding	Pcdh18	ENSMUST00000194603	protein_coding		3	-1	49755464	1515
ENSMUSG00000026686	protein_coding	Lmx1a	ENSMUST00000111377	protein_coding	principal1	1	1	167689237	3200
ENSMUSG00000071528	protein_coding	Atp5md	ENSMUST00000236170	protein_coding	principal1	19	-1	47090647	352
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000150773	processed_transcript		10	1	13090832	345
ENSMUSG00000037960	protein_coding	Card19	ENSMUST00000223496	retained_intron		13	-1	49204116	685
ENSMUSG00000029526	protein_coding	1700123K08Rik	ENSMUST00000199968	retained_intron		5	-1	138564712	1416
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000177371	protein_coding	alternative2	15	-1	64312673	6164
ENSMUSG00000037892	protein_coding	Pcdh18	ENSMUST00000195086	processed_transcript		3	-1	49757283	890
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000105689	protein_coding	alternative1	4	-1	149663284	3132
ENSMUSG00000029526	protein_coding	1700123K08Rik	ENSMUST00000198778	retained_intron		5	-1	138564695	678
ENSMUSG00000040549	protein_coding	Ckap5	ENSMUST00000111338	protein_coding	principal1	2	1	91526762	6665
ENSMUSG00000114288	lincRNA	Gm32123	ENSMUST00000225462	lincRNA		14	1	25109384	1980
ENSMUSG00000103986	processed_pseudogene	Gm5539	ENSMUST00000192177	processed_pseudogene		3	1	59767275	966
ENSMUSG00000031561	protein_coding	Tenm3	ENSMUST00000033965	protein_coding	principal3	8	-1	48674690	8961
ENSMUSG00000114271	lincRNA	Gm32224	ENSMUST00000224207	lincRNA		14	1	25127788	1005
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000127273	protein_coding		4	-1	149675186	716
ENSMUSG00000026686	protein_coding	Lmx1a	ENSMUST00000028003	protein_coding	principal1	1	1	167689557	3347
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000130894	processed_transcript		10	1	13090832	344
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000130449	processed_transcript		10	1	13090832	352
ENSMUSG00000114916	lincRNA	4930572O13Rik	ENSMUST00000225429	lincRNA		14	-1	25143241	774
ENSMUSG00000031561	protein_coding	Tenm3	ENSMUST00000190840	protein_coding	alternative1	8	-1	48674684	8663
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000144437	processed_transcript		10	1	13090832	422
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000139262	processed_transcript		10	1	13090832	424
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000149881	processed_transcript		10	1	13090832	336
ENSMUSG00000037960	protein_coding	Card19	ENSMUST00000221443	processed_transcript		13	-1	49215860	937
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000131224	protein_coding		4	-1	149675625	699
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000138433	processed_transcript		10	1	13090832	357
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000135826	processed_transcript		10	1	13090832	399
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000141068	processed_transcript		10	1	13090832	390
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000146612	protein_coding		4	-1	149698604	729
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000177083	protein_coding	alternative2	15	-1	64312639	4415
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000135261	processed_transcript		10	1	13090832	475
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000134534	protein_coding		4	-1	149698552	436
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000126880	processed_transcript		10	1	13090832	386
ENSMUSG00000031561	protein_coding	Tenm3	ENSMUST00000145344	retained_intron		8	-1	48300099	2526
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000156309	protein_coding		4	-1	149702571	327
ENSMUSG00000040549	protein_coding	Ckap5	ENSMUST00000123253	processed_transcript		2	1	91526978	696
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000137430	processed_transcript		4	-1	149676093	824
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000121325	protein_coding	alternative2	10	1	13090832	3946
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000124510	processed_transcript		4	-1	149701590	404
ENSMUSG00000039936	protein_coding	Pik3cd	ENSMUST00000177654	protein_coding	principal4	4	-1	149674194	4765
ENSMUSG00000060794	protein_coding	Tssk5	ENSMUST00000230436	retained_intron		15	-1	76374920	2055
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000121766	protein_coding	alternative2	10	1	13090835	3897
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000128567	protein_coding		6	1	14901477	647
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000239363	antisense		11	1	116671604	1631
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000130638	retained_intron		10	1	13090841	1187
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000138273	retained_intron		6	1	14901478	1770
ENSMUSG00000083856	processed_pseudogene	Gm13886	ENSMUST00000117876	processed_pseudogene		2	1	104820179	1183
ENSMUSG00000026917	protein_coding	Wdr5	ENSMUST00000113952	protein_coding	principal1	2	1	27515157	2890
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000156883	processed_transcript		6	1	14903457	349
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000115470	protein_coding		6	1	15184647	2692
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000141944	retained_intron		10	1	13090874	452
ENSMUSG00000107778	unprocessed_pseudogene	Gm44098	ENSMUST00000204141	unprocessed_pseudogene		1	1	92589872	46
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000044783	protein_coding	principal3	16	1	20672723	5444
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000130800	retained_intron		10	1	13090874	552
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000154448	protein_coding		6	1	15185203	352
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000115441	protein_coding	principal1	5	-1	5559538	2972
ENSMUSG00000026917	protein_coding	Wdr5	ENSMUST00000140396	protein_coding		2	1	27519761	1031
ENSMUSG00000046300	protein_coding	Olfr1412	ENSMUST00000190505	protein_coding	principal1	1	1	92585779	3663
ENSMUSG00000040549	protein_coding	Ckap5	ENSMUST00000139433	retained_intron		2	1	91546320	2226
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000088842	protein_coding		5	-1	5559523	941
ENSMUSG00000046300	protein_coding	Olfr1412	ENSMUST00000062964	protein_coding	principal1	1	1	92588332	966
ENSMUSG00000026917	protein_coding	Wdr5	ENSMUST00000125088	processed_transcript		2	1	27527772	678
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000143582	protein_coding		10	1	13091013	364
ENSMUSG00000040549	protein_coding	Ckap5	ENSMUST00000111337	protein_coding		2	1	91546333	6384
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000119521	protein_coding		5	-1	5559513	771
ENSMUSG00000027954	protein_coding	Efna1	ENSMUST00000029566	protein_coding	principal1	3	-1	89279645	1480
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000130313	protein_coding		10	1	13113465	624
ENSMUSG00000053219	protein_coding	Raet1e	ENSMUST00000181645	protein_coding	principal1	10	1	22158569	1579
ENSMUSG00000040549	protein_coding	Ckap5	ENSMUST00000133633	retained_intron		2	1	91555240	3403
ENSMUSG00000025049	protein_coding	Taf5	ENSMUST00000026027	protein_coding	principal1	19	1	47067746	3260
ENSMUSG00000019817	protein_coding	Plagl1	ENSMUST00000145103	protein_coding		10	1	13116364	630
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000198421	retained_intron		5	-1	5544191	2290
ENSMUSG00000037960	protein_coding	Card19	ENSMUST00000048946	protein_coding	principal1	13	-1	49216026	804
ENSMUSG00000053219	protein_coding	Raet1e	ENSMUST00000180648	protein_coding		10	1	22165638	687
ENSMUSG00000031561	protein_coding	Tenm3	ENSMUST00000110346	protein_coding		8	-1	48555313	2267
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000127670	retained_intron		5	-1	5543446	660
ENSMUSG00000073843	antisense	Gm12542	ENSMUST00000133015	antisense		4	-1	59894924	647
ENSMUSG00000031561	protein_coding	Tenm3	ENSMUST00000211976	protein_coding		8	-1	48555313	512
ENSMUSG00000117663	unprocessed_pseudogene	Gm50297	ENSMUST00000235346	unprocessed_pseudogene		18	-1	82261262	201
ENSMUSG00000031561	protein_coding	Tenm3	ENSMUST00000110345	protein_coding		8	-1	48555846	609
ENSMUSG00000080772	transcribed_processed_pseudogene	Gm12543	ENSMUST00000120410	transcribed_processed_pseudogene		4	1	59833677	543
ENSMUSG00000037960	protein_coding	Card19	ENSMUST00000222733	processed_transcript		13	-1	49216037	665
ENSMUSG00000060794	protein_coding	Tssk5	ENSMUST00000071119	protein_coding	principal1	15	-1	76374938	1518
ENSMUSG00000053219	protein_coding	Raet1e	ENSMUST00000065527	protein_coding	principal1	10	1	22173521	1274
ENSMUSG00000031561	protein_coding	Tenm3	ENSMUST00000110343	protein_coding		8	-1	48556039	639
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000115463	protein_coding	alternative2	16	1	20672746	5378
ENSMUSG00000037960	protein_coding	Card19	ENSMUST00000223159	retained_intron		13	-1	49215866	422
ENSMUSG00000060794	protein_coding	Tssk5	ENSMUST00000227223	processed_transcript		15	-1	76373063	18
ENSMUSG00000027954	protein_coding	Efna1	ENSMUST00000118587	protein_coding		3	-1	89281142	1632
ENSMUSG00000101766	protein_coding	Gm20908	ENSMUST00000186004	protein_coding	principal1	Y	1	64473266	922
ENSMUSG00000083767	processed_pseudogene	Gm11405	ENSMUST00000118689	processed_pseudogene		4	1	74228197	1556
ENSMUSG00000111308	TEC	Gm48710	ENSMUST00000213107	TEC		9	1	41228882	3310
ENSMUSG00000053219	protein_coding	Raet1e	ENSMUST00000178026	protein_coding	principal1	10	1	22173919	1218
ENSMUSG00000110335	lincRNA	1700015I17Rik	ENSMUST00000209585	lincRNA		8	-1	35719949	2099
ENSMUSG00000049940	protein_coding	Pgrmc2	ENSMUST00000058578	protein_coding	principal1	3	-1	41083046	3007
ENSMUSG00000031561	protein_coding	Tenm3	ENSMUST00000211812	protein_coding		8	-1	48843951	763
ENSMUSG00000118616	unprocessed_pseudogene	BX001068.1	ENSMUST00000239209	unprocessed_pseudogene		13	1	21356234	539
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000100527	protein_coding	principal4	15	-1	76080913	1881
ENSMUSG00000027954	protein_coding	Efna1	ENSMUST00000118860	protein_coding		3	-1	89279641	1403
ENSMUSG00000028698	protein_coding	Pik3r3	ENSMUST00000030464	protein_coding	principal1	4	1	116221661	5257
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000128887	nonsense_mediated_decay		5	-1	5557242	767
ENSMUSG00000039929	protein_coding	Urb1	ENSMUST00000140920	protein_coding	principal1	16	-1	90810392	7344
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000126855	nonsense_mediated_decay		5	-1	5559461	529
ENSMUSG00000117664	lincRNA	Gm36860	ENSMUST00000236569	lincRNA		19	-1	32980063	456
ENSMUSG00000100706	processed_transcript	Gm19744	ENSMUST00000187946	lincRNA		8	1	48843665	662
ENSMUSG00000049940	protein_coding	Pgrmc2	ENSMUST00000124636	retained_intron		3	-1	41070670	596
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000152984	retained_intron		5	-1	5555754	708
ENSMUSG00000117914	lincRNA	Gm29863	ENSMUST00000236508	lincRNA		19	1	33070072	1017
ENSMUSG00000028698	protein_coding	Pik3r3	ENSMUST00000106490	protein_coding		4	1	116221696	1830
ENSMUSG00000039929	protein_coding	Urb1	ENSMUST00000140158	retained_intron		16	-1	90772791	809
ENSMUSG00000100706	processed_transcript	Gm19744	ENSMUST00000190967	lincRNA		8	1	48843722	317
ENSMUSG00000040549	protein_coding	Ckap5	ENSMUST00000147809	processed_transcript		2	1	91594765	1272
ENSMUSG00000085920	lincRNA	Gm12951	ENSMUST00000150216	lincRNA		4	1	116176246	434
ENSMUSG00000040549	protein_coding	Ckap5	ENSMUST00000129118	retained_intron		2	1	91596088	718
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000152950	retained_intron		5	-1	5547268	943
ENSMUSG00000100706	processed_transcript	Gm19744	ENSMUST00000186135	antisense		8	1	48843797	948
ENSMUSG00000108131	unprocessed_pseudogene	Gm44099	ENSMUST00000203299	unprocessed_pseudogene		1	1	92595365	112
ENSMUSG00000100706	processed_transcript	Gm19744	ENSMUST00000185458	retained_intron		8	1	48844041	316
ENSMUSG00000062497	protein_coding	Olfr1411	ENSMUST00000190844	protein_coding	principal1	1	1	92594411	1821
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000147244	nonsense_mediated_decay		5	-1	5559482	685
ENSMUSG00000100706	processed_transcript	Gm19744	ENSMUST00000189912	antisense		8	1	48844103	184
ENSMUSG00000040464	protein_coding	Gtpbp10	ENSMUST00000198799	protein_coding		5	-1	5559516	648
ENSMUSG00000062497	protein_coding	Olfr1411	ENSMUST00000216444	protein_coding	principal1	1	1	92594411	1901
ENSMUSG00000109714	processed_transcript	Gm35021	ENSMUST00000210976	retained_intron		8	1	35724175	788
ENSMUSG00000100706	processed_transcript	Gm19744	ENSMUST00000188936	lincRNA		8	1	48855417	4533
ENSMUSG00000040549	protein_coding	Ckap5	ENSMUST00000099716	protein_coding	principal1	2	1	91546322	6574
ENSMUSG00000110480	processed_pseudogene	Gm32842	ENSMUST00000212653	processed_pseudogene		8	-1	48270985	738
ENSMUSG00000110509	processed_pseudogene	Gm45772	ENSMUST00000212961	processed_pseudogene		8	-1	48631169	240
ENSMUSG00000017607	protein_coding	Tns4	ENSMUST00000017751	protein_coding	principal1	11	-1	99089306	4755
ENSMUSG00000109714	processed_transcript	Gm35021	ENSMUST00000211555	lincRNA		8	1	35724300	592
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000227316	nonsense_mediated_decay		15	-1	76080870	1825
ENSMUSG00000062497	protein_coding	Olfr1411	ENSMUST00000073748	protein_coding	principal1	1	1	92596521	972
ENSMUSG00000093570	lincRNA	Gm20714	ENSMUST00000176811	lincRNA		6	-1	4807434	239
ENSMUSG00000040549	protein_coding	Ckap5	ENSMUST00000046769	protein_coding		2	1	91546322	6511
ENSMUSG00000109714	processed_transcript	Gm35021	ENSMUST00000210289	lincRNA		8	1	35724382	961
ENSMUSG00000109714	processed_transcript	Gm35021	ENSMUST00000210105	lincRNA		8	1	35725444	2329
ENSMUSG00000118196	lincRNA	Gm29946	ENSMUST00000237929	lincRNA		19	1	33122647	2550
ENSMUSG00000105258	lincRNA	Gm40038	ENSMUST00000197878	lincRNA		3	-1	41172663	1370
ENSMUSG00000102214	processed_pseudogene	Gm37492	ENSMUST00000191948	processed_pseudogene		3	-1	23375317	376
ENSMUSG00000039929	protein_coding	Urb1	ENSMUST00000142955	retained_intron		16	-1	90810392	2183
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000002599	protein_coding	alternative2	15	-1	76080912	1821
ENSMUSG00000093570	lincRNA	Gm20714	ENSMUST00000176436	lincRNA		6	-1	4816329	748
ENSMUSG00000017607	protein_coding	Tns4	ENSMUST00000107465	processed_transcript		11	-1	99073864	678
ENSMUSG00000039929	protein_coding	Urb1	ENSMUST00000140942	retained_intron		16	-1	90810381	1218
ENSMUSG00000093570	lincRNA	Gm20714	ENSMUST00000176391	lincRNA		6	-1	4812877	338
ENSMUSG00000106000	lincRNA	Gm16508	ENSMUST00000197066	lincRNA		3	-1	41290590	2742
ENSMUSG00000093538	antisense	Gm20711	ENSMUST00000177351	antisense		1	1	168004139	714
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000227251	retained_intron		15	-1	76071397	429
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000167662	protein_coding	principal1	17	1	26561489	2754
ENSMUSG00000017607	protein_coding	Tns4	ENSMUST00000153351	retained_intron		11	-1	99075341	677
ENSMUSG00000039929	protein_coding	Urb1	ENSMUST00000128989	retained_intron		16	-1	90810413	661
ENSMUSG00000112728	lincRNA	Gm48903	ENSMUST00000219525	lincRNA		10	1	117390022	644
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000142344	protein_coding		16	1	20672749	3094
ENSMUSG00000112796	lincRNA	Gm40770	ENSMUST00000220040	lincRNA		10	-1	117413904	1502
ENSMUSG00000101499	unprocessed_pseudogene	Vmn2r-ps139	ENSMUST00000190764	unprocessed_pseudogene		Y	1	4005164	2057
ENSMUSG00000017607	protein_coding	Tns4	ENSMUST00000123303	retained_intron		11	-1	99089285	763
ENSMUSG00000067219	protein_coding	Nipal1	ENSMUST00000087212	protein_coding	principal1	5	1	72647795	4206
ENSMUSG00000102203	lincRNA	4930412E21Rik	ENSMUST00000194267	lincRNA		3	1	23461050	778
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000177374	protein_coding	principal3	15	-1	64382919	4582
ENSMUSG00000023274	protein_coding	Cd4	ENSMUST00000024044	protein_coding	principal1	6	-1	124888221	3108
ENSMUSG00000097630	processed_pseudogene	Gm26828	ENSMUST00000180640	processed_pseudogene		6	1	4832227	172
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000165021	processed_transcript		17	1	26561518	514
ENSMUSG00000067219	protein_coding	Nipal1	ENSMUST00000197837	protein_coding		5	1	72647813	466
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000143939	protein_coding	alternative2	16	1	20672755	5114
ENSMUSG00000067219	protein_coding	Nipal1	ENSMUST00000197772	retained_intron		5	1	72647842	546
ENSMUSG00000101108	unprocessed_pseudogene	Gm29038	ENSMUST00000191543	unprocessed_pseudogene		Y	-1	4164705	678
ENSMUSG00000108593	lincRNA	Gm44581	ENSMUST00000206227	lincRNA		7	-1	3932849	1693
ENSMUSG00000023274	protein_coding	Cd4	ENSMUST00000145977	processed_transcript		6	-1	124870272	273
ENSMUSG00000024812	protein_coding	Tjp2	ENSMUST00000233027	protein_coding	alternative2	19	-1	24174189	4668
ENSMUSG00000104443	TEC	4932442E05Rik	ENSMUST00000191892	TEC		10	1	118860826	2717
ENSMUSG00000063583	protein_coding	Olfr1410	ENSMUST00000217316	protein_coding	principal1	1	1	92605782	7927
ENSMUSG00000118279	lincRNA	Gm50298	ENSMUST00000237322	lincRNA		18	1	82281285	670
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000229474	retained_intron		15	-1	76077990	831
ENSMUSG00000023274	protein_coding	Cd4	ENSMUST00000145818	processed_transcript		6	-1	124870489	591
ENSMUSG00000063583	protein_coding	Olfr1410	ENSMUST00000216553	protein_coding	principal1	1	1	92605823	5433
ENSMUSG00000062132	protein_coding	Arhgap33os	ENSMUST00000124276	processed_transcript		7	1	30515122	2648
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000230924	nonsense_mediated_decay		15	-1	76080904	652
ENSMUSG00000100300	unprocessed_pseudogene	Gm28191	ENSMUST00000189112	unprocessed_pseudogene		Y	1	4227580	211
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000239049	protein_coding	alternative1	19	-1	45803574	2113
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000128594	protein_coding		16	1	20672770	2799
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000150333	protein_coding		16	1	20672771	2898
ENSMUSG00000023274	protein_coding	Cd4	ENSMUST00000151594	retained_intron		6	-1	124888199	1647
ENSMUSG00000063583	protein_coding	Olfr1410	ENSMUST00000079790	protein_coding		1	1	92607839	969
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000175793	protein_coding	alternative2	15	-1	64349886	4314
ENSMUSG00000083041	processed_pseudogene	Gmfg-ps	ENSMUST00000121071	processed_pseudogene		6	-1	4893778	427
ENSMUSG00000024812	protein_coding	Tjp2	ENSMUST00000233658	protein_coding	principal2	19	-1	24200650	4920
ENSMUSG00000062132	protein_coding	Arhgap33os	ENSMUST00000238768	protein_coding	principal1	7	1	30515699	2117
ENSMUSG00000118057	lincRNA	B020010K11Rik	ENSMUST00000235445	lincRNA		18	-1	82361600	3579
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000230968	retained_intron		15	-1	76080924	769
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000175799	protein_coding	alternative2	15	-1	64382756	4237
ENSMUSG00000023274	protein_coding	Cd4	ENSMUST00000130378	retained_intron		6	-1	124888200	946
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000229496	processed_transcript		15	-1	76079473	586
ENSMUSG00000028630	protein_coding	Dyrk2	ENSMUST00000004281	protein_coding	principal1	10	-1	118869149	6129
ENSMUSG00000058625	processed_pseudogene	Gm17383	ENSMUST00000078739	processed_pseudogene		18	1	82338462	1355
ENSMUSG00000108765	processed_pseudogene	Gm44580	ENSMUST00000206333	processed_pseudogene		7	-1	3934394	877
ENSMUSG00000024812	protein_coding	Tjp2	ENSMUST00000232956	protein_coding	alternative2	19	-1	24225030	4728
ENSMUSG00000105297	lincRNA	1700052H01Rik	ENSMUST00000196973	lincRNA		3	1	41354147	429
ENSMUSG00000028938	protein_coding	Galntl5	ENSMUST00000030778	protein_coding	principal2	5	1	25181460	1627
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000229030	retained_intron		15	-1	76077702	349
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000176384	protein_coding	alternative2	15	-1	64382737	4149
ENSMUSG00000100683	unprocessed_pseudogene	Gm28186	ENSMUST00000187447	unprocessed_pseudogene		Y	-1	4312582	679
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000111906	retained_intron		19	-1	45816022	3114
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000230143	processed_transcript		15	-1	76076953	728
ENSMUSG00000105297	lincRNA	1700052H01Rik	ENSMUST00000196142	lincRNA		3	1	41367626	717
ENSMUSG00000000317	protein_coding	Bcl6b	ENSMUST00000000326	protein_coding	principal1	11	-1	70229739	3366
ENSMUSG00000002524	protein_coding	Puf60	ENSMUST00000228459	retained_intron		15	-1	76080882	1008
ENSMUSG00000028385	protein_coding	Snx30	ENSMUST00000030080	protein_coding	principal1	4	1	59805840	7314
ENSMUSG00000095826	processed_pseudogene	Gm9002	ENSMUST00000178437	processed_pseudogene		10	1	117429618	499
ENSMUSG00000028630	protein_coding	Dyrk2	ENSMUST00000218477	processed_transcript		10	-1	118870209	469
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000001619	protein_coding		17	1	26561545	767
ENSMUSG00000024812	protein_coding	Tjp2	ENSMUST00000236570	protein_coding		19	-1	24143082	741
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000177035	protein_coding	alternative2	15	-1	64349886	3228
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000235915	protein_coding		17	1	26594876	1132
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000139934	antisense		11	1	116671660	865
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000176014	protein_coding	alternative2	15	-1	64349886	3435
ENSMUSG00000000317	protein_coding	Bcl6b	ENSMUST00000153449	protein_coding		11	-1	70229677	384
ENSMUSG00000028385	protein_coding	Snx30	ENSMUST00000123665	processed_transcript		4	1	59805880	586
ENSMUSG00000028630	protein_coding	Dyrk2	ENSMUST00000218692	processed_transcript		10	-1	118868299	349
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000231618	protein_coding		16	1	20672820	713
ENSMUSG00000028938	protein_coding	Galntl5	ENSMUST00000114965	protein_coding	alternative2	5	1	25181502	1458
ENSMUSG00000108712	processed_pseudogene	Gm3189	ENSMUST00000205595	processed_pseudogene		7	-1	3957071	832
ENSMUSG00000000317	protein_coding	Bcl6b	ENSMUST00000140542	retained_intron		11	-1	70229798	652
ENSMUSG00000024812	protein_coding	Tjp2	ENSMUST00000237937	processed_transcript		19	-1	24147067	615
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000176909	retained_intron		15	-1	64102542	474
ENSMUSG00000112344	lincRNA	Gm32141	ENSMUST00000220189	lincRNA		10	-1	117447493	488
ENSMUSG00000097086	processed_pseudogene	Gm7672	ENSMUST00000180915	processed_pseudogene		10	-1	22046985	872
ENSMUSG00000024812	protein_coding	Tjp2	ENSMUST00000237550	protein_coding		19	-1	24173136	400
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000142834	antisense		11	1	116671669	661
ENSMUSG00000090535	unprocessed_pseudogene	Gm8540	ENSMUST00000168952	unprocessed_pseudogene		10	-1	22048512	732
ENSMUSG00000028385	protein_coding	Snx30	ENSMUST00000145199	processed_transcript		4	1	59884694	2303
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000140576	protein_coding		16	1	20672823	741
ENSMUSG00000117481	processed_pseudogene	Gm49966	ENSMUST00000235012	processed_pseudogene		18	-1	32112307	267
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000176427	processed_transcript		15	-1	64122770	339
ENSMUSG00000038084	protein_coding	Opa1	ENSMUST00000160597	protein_coding	principal3	16	1	29579334	6230
ENSMUSG00000024812	protein_coding	Tjp2	ENSMUST00000099558	protein_coding	principal2	19	-1	24225026	4591
ENSMUSG00000028385	protein_coding	Snx30	ENSMUST00000143185	processed_transcript		4	1	59884780	713
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000177475	retained_intron		15	-1	64123806	339
ENSMUSG00000105260	lincRNA	Gm40040	ENSMUST00000196337	lincRNA		3	-1	41481885	305
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000176358	protein_coding		15	-1	64208491	631
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000239180	antisense		11	1	116671669	1083
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000115457	protein_coding	alternative2	16	1	20672823	5440
ENSMUSG00000057715	protein_coding	A830018L16Rik	ENSMUST00000048613	protein_coding	principal3	1	1	11414105	2779
ENSMUSG00000105260	lincRNA	Gm40040	ENSMUST00000196123	lincRNA		3	-1	41482391	504
ENSMUSG00000102088	transcribed_unprocessed_pseudogene	Gm21064	ENSMUST00000189723	processed_transcript		Y	1	4341127	1375
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000106378	antisense		11	1	116671669	1988
ENSMUSG00000102088	transcribed_unprocessed_pseudogene	Gm21064	ENSMUST00000190583	transcribed_unprocessed_pseudogene		Y	1	4342544	278
ENSMUSG00000055319	protein_coding	Sec23ip	ENSMUST00000042942	protein_coding	principal1	7	1	128744943	4505
ENSMUSG00000111953	processed_pseudogene	Gm18637	ENSMUST00000217665	processed_pseudogene		10	1	22052251	1900
ENSMUSG00000046854	protein_coding	Pip5kl1	ENSMUST00000134204	processed_transcript		2	1	32574797	640
ENSMUSG00000085929	processed_transcript	Gm13421	ENSMUST00000142511	processed_transcript		2	1	27540426	803
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000239226	antisense		11	1	116671675	1257
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000235653	nonsense_mediated_decay		17	1	26601282	1678
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000167070	protein_coding		17	1	26601325	1353
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000153405	antisense		11	1	116671677	1151
ENSMUSG00000061616	protein_coding	Olfr12	ENSMUST00000213247	protein_coding	principal1	1	1	92617788	4158
ENSMUSG00000108505	lincRNA	1700095K22Rik	ENSMUST00000206808	lincRNA		7	1	3981150	282
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000237902	nonsense_mediated_decay		17	1	26602224	1388
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000131489	nonsense_mediated_decay		8	1	70234226	4609
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000239190	antisense		11	1	116671681	881
ENSMUSG00000055319	protein_coding	Sec23ip	ENSMUST00000206504	retained_intron		7	1	128744977	4604
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000235197	nonsense_mediated_decay		17	1	26607831	1795
ENSMUSG00000099514	unprocessed_pseudogene	Gm28241	ENSMUST00000190916	unprocessed_pseudogene		Y	1	4531045	235
ENSMUSG00000057715	protein_coding	A830018L16Rik	ENSMUST00000150870	processed_transcript		1	1	11414112	658
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000236642	nonsense_mediated_decay		17	1	26607863	1389
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000176821	processed_transcript		15	-1	64382732	396
ENSMUSG00000085929	processed_transcript	Gm13421	ENSMUST00000132898	processed_transcript		2	1	27540429	549
ENSMUSG00000061616	protein_coding	Olfr12	ENSMUST00000081274	protein_coding	principal1	1	1	92619881	1121
ENSMUSG00000091184	antisense	Gm17059	ENSMUST00000168284	antisense		10	-1	59800254	519
ENSMUSG00000055319	protein_coding	Sec23ip	ENSMUST00000205856	nonsense_mediated_decay		7	1	128745035	444
ENSMUSG00000057715	protein_coding	A830018L16Rik	ENSMUST00000142117	processed_transcript		1	1	11414112	1499
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000170640	nonsense_mediated_decay		17	1	26607892	1288
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000239281	antisense		11	1	116671688	857
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000093458	protein_coding	principal1	8	1	70234233	3874
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000175710	retained_intron		15	-1	64312673	985
ENSMUSG00000091941	processed_pseudogene	Gm7399	ENSMUST00000032395	processed_pseudogene		10	1	59806557	858
ENSMUSG00000027244	protein_coding	Atg13	ENSMUST00000028678	protein_coding	alternative1	2	-1	91710519	3604
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000236481	retained_intron		17	1	26613450	1008
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000144049	antisense		11	1	116671708	966
ENSMUSG00000090350	processed_pseudogene	Gm17148	ENSMUST00000164702	processed_pseudogene		10	1	59708790	249
ENSMUSG00000100446	lincRNA	Gm28242	ENSMUST00000187274	lincRNA		Y	1	4586871	1492
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000134818	antisense		11	1	116671871	1080
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000176516	processed_transcript		15	-1	64311689	238
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000163213	protein_coding		17	1	26621449	1009
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000239283	antisense		11	1	116672049	1110
ENSMUSG00000055319	protein_coding	Sec23ip	ENSMUST00000206986	protein_coding		7	1	128745420	399
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000131260	antisense		11	1	116672648	611
ENSMUSG00000083344	processed_pseudogene	Gm7363	ENSMUST00000119883	processed_pseudogene		7	-1	3984185	399
ENSMUSG00000020812	antisense	Snhg16	ENSMUST00000239362	antisense		11	1	116672917	524
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000145078	protein_coding		8	1	70234617	525
ENSMUSG00000108720	antisense	Gm44672	ENSMUST00000206944	antisense		7	-1	128745276	1098
ENSMUSG00000102680	TEC	Gm37222	ENSMUST00000192806	TEC		Y	1	4666848	2961
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000165802	retained_intron		17	1	26624183	3195
ENSMUSG00000001576	protein_coding	Ergic1	ENSMUST00000236163	processed_transcript		17	1	26636023	2150
ENSMUSG00000087535	antisense	Zmiz1os1	ENSMUST00000225188	antisense		14	-1	25457798	1223
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000107151	protein_coding		11	-1	102230166	4852
ENSMUSG00000082093	processed_pseudogene	Gm15928	ENSMUST00000122455	processed_pseudogene		7	-1	3993518	280
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000175963	protein_coding		15	-1	64313810	466
ENSMUSG00000110170	protein_coding	St6galnac2	ENSMUST00000144398	protein_coding	principal1	11	-1	116681290	1683
ENSMUSG00000057715	protein_coding	A830018L16Rik	ENSMUST00000141512	nonsense_mediated_decay		1	1	11414112	1816
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000136758	retained_intron		8	1	70234623	3517
ENSMUSG00000087535	antisense	Zmiz1os1	ENSMUST00000156682	antisense		14	-1	25461128	3469
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000155771	protein_coding		8	1	70236388	685
ENSMUSG00000091078	antisense	Gm17218	ENSMUST00000165911	antisense		17	-1	26625100	410
ENSMUSG00000104716	processed_pseudogene	Gm30652	ENSMUST00000199103	processed_pseudogene		5	1	5567328	430
ENSMUSG00000097601	lincRNA	Gm26660	ENSMUST00000223620	lincRNA		14	-1	25379609	4112
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000106061	protein_coding	principal1	4	-1	129189542	4426
ENSMUSG00000118068	sense_intronic	Gm50275	ENSMUST00000237899	sense_intronic		17	-1	26538227	746
ENSMUSG00000074589	transcribed_unprocessed_pseudogene	4930449A18Rik	ENSMUST00000094228	processed_transcript		3	1	59777809	2071
ENSMUSG00000097601	lincRNA	Gm26660	ENSMUST00000181582	lincRNA		14	-1	25378635	2543
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000156330	retained_intron		8	1	70243584	7248
ENSMUSG00000074589	transcribed_unprocessed_pseudogene	4930449A18Rik	ENSMUST00000192453	transcribed_unprocessed_pseudogene		3	1	59825749	1200
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000110114	protein_coding	alternative2	15	-1	64382919	4409
ENSMUSG00000102757	processed_pseudogene	Gm2756	ENSMUST00000195851	processed_pseudogene		3	-1	59783688	400
ENSMUSG00000021025	protein_coding	Nfkbia	ENSMUST00000021413	protein_coding	principal1	12	-1	55492647	1578
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000135640	retained_intron		8	1	70248144	658
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000110115	protein_coding	alternative2	15	-1	64382919	4535
ENSMUSG00000022377	protein_coding	Asap1	ENSMUST00000023008	protein_coding	alternative2	15	-1	64382919	4580
ENSMUSG00000073234	protein_coding	Gm8773	ENSMUST00000101627	protein_coding	principal1	5	1	5573799	1268
ENSMUSG00000115646	TEC	Gm10926	ENSMUST00000228336	TEC		15	-1	64329017	990
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000148378	processed_transcript		8	1	70252064	564
ENSMUSG00000021025	protein_coding	Nfkbia	ENSMUST00000219869	retained_intron		12	-1	55491810	701
ENSMUSG00000107648	protein_coding	Olfr764-ps1	ENSMUST00000204763	protein_coding	principal1	10	-1	129039896	2854
ENSMUSG00000057715	protein_coding	A830018L16Rik	ENSMUST00000135014	protein_coding	alternative2	1	1	11414269	6451
ENSMUSG00000038084	protein_coding	Opa1	ENSMUST00000159036	retained_intron		16	1	29579378	2288
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000126239	protein_coding		8	1	70257202	4440
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000156226	nonsense_mediated_decay		16	1	20673295	2200
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000130492	retained_intron		8	1	70257476	600
ENSMUSG00000027244	protein_coding	Atg13	ENSMUST00000076803	protein_coding	principal2	2	-1	91710576	3551
ENSMUSG00000099684	transcribed_unprocessed_pseudogene	Gm28356	ENSMUST00000187566	transcribed_unprocessed_pseudogene		Y	-1	4793479	858
ENSMUSG00000056853	protein_coding	Olfr765	ENSMUST00000216460	protein_coding	principal1	10	-1	129049998	2594
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000154950	protein_coding		16	1	20673398	850
ENSMUSG00000034321	protein_coding	Exosc1	ENSMUST00000112123	protein_coding		19	-1	41933423	2296
ENSMUSG00000056853	protein_coding	Olfr765	ENSMUST00000071559	protein_coding	principal1	10	-1	129047061	930
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000115461	protein_coding	alternative2	16	1	20673420	5507
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000162528	protein_coding	alternative1	19	-1	45816061	2395
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000133924	processed_transcript		8	1	70259752	511
ENSMUSG00000099684	transcribed_unprocessed_pseudogene	Gm28356	ENSMUST00000186941	processed_transcript		Y	-1	4794934	927
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000136391	retained_intron		8	1	70260442	470
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000129402	processed_transcript		8	1	70273592	448
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000136713	protein_coding		16	1	20673439	689
ENSMUSG00000036054	protein_coding	Sugp2	ENSMUST00000164403	protein_coding	principal1	8	1	70234226	4099
ENSMUSG00000027244	protein_coding	Atg13	ENSMUST00000136412	processed_transcript		2	-1	91705734	644
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000086993	protein_coding		19	-1	45812291	1005
ENSMUSG00000007817	protein_coding	Zmiz1	ENSMUST00000161766	retained_intron		14	1	25459185	2225
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000115460	protein_coding	principal3	16	1	20673517	5638
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000072431	protein_coding		4	-1	129189579	4059
ENSMUSG00000029844	protein_coding	Hoxa1	ENSMUST00000000964	protein_coding	principal1	6	-1	52158317	2251
ENSMUSG00000038084	protein_coding	Opa1	ENSMUST00000160475	nonsense_mediated_decay		16	1	29579380	3263
ENSMUSG00000027171	protein_coding	Prrg4	ENSMUST00000028593	protein_coding	principal1	2	-1	104849876	2872
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000141034	protein_coding		16	1	20673814	694
ENSMUSG00000034321	protein_coding	Exosc1	ENSMUST00000075280	protein_coding	principal1	19	-1	41933296	1018
ENSMUSG00000051906	protein_coding	Cd209f	ENSMUST00000145007	protein_coding	principal2	8	-1	4105835	1186
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000151679	protein_coding		16	1	20674111	687
ENSMUSG00000024190	protein_coding	Dusp1	ENSMUST00000025025	protein_coding	principal1	17	-1	26508519	1990
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000106059	protein_coding		4	-1	129189727	4084
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000026247	protein_coding	alternative1	19	-1	45816025	1203
ENSMUSG00000027171	protein_coding	Prrg4	ENSMUST00000126824	protein_coding		2	-1	104849493	751
ENSMUSG00000038084	protein_coding	Opa1	ENSMUST00000161186	protein_coding		16	1	29579380	3153
ENSMUSG00000024190	protein_coding	Dusp1	ENSMUST00000236661	protein_coding		17	-1	26508472	1587
ENSMUSG00000027244	protein_coding	Atg13	ENSMUST00000153631	processed_transcript		2	-1	91685252	776
ENSMUSG00000034321	protein_coding	Exosc1	ENSMUST00000238034	retained_intron		19	-1	41933248	484
ENSMUSG00000038084	protein_coding	Opa1	ENSMUST00000038867	protein_coding	alternative1	16	1	29579380	3230
ENSMUSG00000052534	protein_coding	Pbx1	ENSMUST00000188912	protein_coding	alternative1	1	-1	168432270	3970
ENSMUSG00000034321	protein_coding	Exosc1	ENSMUST00000237177	retained_intron		19	-1	41933298	1504
ENSMUSG00000066232	protein_coding	Ipo7	ENSMUST00000084731	protein_coding	principal1	7	1	110018274	4763
ENSMUSG00000029844	protein_coding	Hoxa1	ENSMUST00000120363	protein_coding		6	-1	52158317	2043
ENSMUSG00000024190	protein_coding	Dusp1	ENSMUST00000126178	retained_intron		17	-1	26508474	2313
ENSMUSG00000024190	protein_coding	Dusp1	ENSMUST00000235532	protein_coding		17	-1	26562128	1809
ENSMUSG00000057286	protein_coding	St6galnac2	ENSMUST00000079545	protein_coding	principal1	11	-1	116694868	3643
ENSMUSG00000027244	protein_coding	Atg13	ENSMUST00000126000	processed_transcript		2	-1	91682229	848
ENSMUSG00000024190	protein_coding	Dusp1	ENSMUST00000146077	retained_intron		17	-1	26507723	839
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000148920	processed_transcript		4	-1	129189577	666
ENSMUSG00000038084	protein_coding	Opa1	ENSMUST00000160153	retained_intron		16	1	29579392	4017
ENSMUSG00000027244	protein_coding	Atg13	ENSMUST00000139548	processed_transcript		2	-1	91679695	693
ENSMUSG00000024190	protein_coding	Dusp1	ENSMUST00000011196	processed_transcript		17	-1	26561499	421
ENSMUSG00000087658	antisense	Hotairm1	ENSMUST00000129546	antisense		6	1	52156902	409
ENSMUSG00000038084	protein_coding	Opa1	ENSMUST00000162240	protein_coding		16	1	29587014	888
ENSMUSG00000087658	antisense	Hotairm1	ENSMUST00000132559	antisense		6	1	52158432	713
ENSMUSG00000057286	protein_coding	St6galnac2	ENSMUST00000135771	processed_transcript		11	-1	116679678	3006
ENSMUSG00000057286	protein_coding	St6galnac2	ENSMUST00000123236	processed_transcript		11	-1	116684816	751
ENSMUSG00000038084	protein_coding	Opa1	ENSMUST00000160101	retained_intron		16	1	29616625	653
ENSMUSG00000057715	protein_coding	A830018L16Rik	ENSMUST00000137824	protein_coding	alternative2	1	1	11414509	1880
ENSMUSG00000057286	protein_coding	St6galnac2	ENSMUST00000129236	processed_transcript		11	-1	116685917	432
ENSMUSG00000051906	protein_coding	Cd209f	ENSMUST00000207294	retained_intron		8	-1	4105728	1537
ENSMUSG00000087658	antisense	Hotairm1	ENSMUST00000159006	antisense		6	1	52158524	253
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000148112	retained_intron		4	-1	129180422	677
ENSMUSG00000057715	protein_coding	A830018L16Rik	ENSMUST00000179089	protein_coding	alternative2	1	1	11414509	1832
ENSMUSG00000057286	protein_coding	St6galnac2	ENSMUST00000145441	processed_transcript		11	-1	116694609	579
ENSMUSG00000112348	processed_transcript	Gm36634	ENSMUST00000218356	processed_transcript		12	1	55497721	1259
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000159245	protein_coding		19	-1	45795704	519
ENSMUSG00000028755	protein_coding	Cda	ENSMUST00000144986	retained_intron		4	-1	138343649	720
ENSMUSG00000051906	protein_coding	Cd209f	ENSMUST00000156276	retained_intron		8	-1	4105542	1150
ENSMUSG00000057715	protein_coding	A830018L16Rik	ENSMUST00000141339	protein_coding		1	1	11518671	3566
ENSMUSG00000046854	protein_coding	Pip5kl1	ENSMUST00000055304	protein_coding	principal1	2	1	32575718	1577
ENSMUSG00000057715	protein_coding	A830018L16Rik	ENSMUST00000191437	processed_transcript		1	1	11579306	544
ENSMUSG00000052534	protein_coding	Pbx1	ENSMUST00000176540	protein_coding	principal4	1	-1	168431897	6876
ENSMUSG00000051906	protein_coding	Cd209f	ENSMUST00000138439	protein_coding	alternative2	8	-1	4105764	1165
ENSMUSG00000057715	protein_coding	A830018L16Rik	ENSMUST00000171690	protein_coding	alternative2	1	1	11414105	6158
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000161886	protein_coding	principal3	19	-1	45815833	693
ENSMUSG00000099845	processed_pseudogene	Gm29273	ENSMUST00000188880	processed_pseudogene		1	-1	11608400	262
ENSMUSG00000051906	protein_coding	Cd209f	ENSMUST00000128568	retained_intron		8	-1	4105461	705
ENSMUSG00000008348	protein_coding	Ubc	ENSMUST00000136312	protein_coding	principal1	5	-1	125390014	2618
ENSMUSG00000046854	protein_coding	Pip5kl1	ENSMUST00000100188	nonsense_mediated_decay		2	1	32575843	1794
ENSMUSG00000103561	TEC	Gm38069	ENSMUST00000195360	TEC		1	1	11704207	2144
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000162661	protein_coding		19	-1	45815803	517
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000151971	retained_intron		4	-1	129189577	2589
ENSMUSG00000103825	TEC	Gm38178	ENSMUST00000194502	TEC		1	1	11416918	2471
ENSMUSG00000052534	protein_coding	Pbx1	ENSMUST00000176790	protein_coding	alternative1	1	-1	168431750	1828
ENSMUSG00000046854	protein_coding	Pip5kl1	ENSMUST00000124980	retained_intron		2	1	32579927	778
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000159446	protein_coding		19	-1	45797044	375
ENSMUSG00000117650	lincRNA	4933435E02Rik	ENSMUST00000234704	lincRNA		18	-1	32118783	537
ENSMUSG00000117650	lincRNA	4933435E02Rik	ENSMUST00000234068	lincRNA		18	-1	32120413	1365
ENSMUSG00000052534	protein_coding	Pbx1	ENSMUST00000097471	processed_transcript		1	-1	168164662	498
ENSMUSG00000008348	protein_coding	Ubc	ENSMUST00000156249	protein_coding	principal1	5	-1	125390202	2581
ENSMUSG00000052534	protein_coding	Pbx1	ENSMUST00000064438	protein_coding		1	-1	168431504	1020
ENSMUSG00000075405	antisense	9430097D07Rik	ENSMUST00000100190	antisense		2	-1	32575684	1501
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000132320	retained_intron		16	1	20678276	5004
ENSMUSG00000021285	protein_coding	Ppp1r13b	ENSMUST00000054815	protein_coding	principal1	12	-1	111908110	4389
ENSMUSG00000070699	protein_coding	Sars2	ENSMUST00000207877	nonsense_mediated_decay		7	1	28741992	788
ENSMUSG00000041797	protein_coding	Abca9	ENSMUST00000044850	protein_coding	principal1	11	-1	110168196	6384
ENSMUSG00000021211	protein_coding	Akr1c12	ENSMUST00000021632	protein_coding	principal1	13	-1	4279433	1261
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000008999	protein_coding	alternative2	11	-1	102230124	4269
ENSMUSG00000052534	protein_coding	Pbx1	ENSMUST00000176482	retained_intron		1	-1	168431660	1674
ENSMUSG00000111382	processed_pseudogene	Gm47536	ENSMUST00000213983	processed_pseudogene		9	-1	32175168	231
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000136106	processed_transcript		16	1	20678406	626
ENSMUSG00000069712	protein_coding	4930444G20Rik	ENSMUST00000092672	protein_coding	principal1	10	-1	22068079	1773
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000117965	protein_coding		4	-1	129189512	1126
ENSMUSG00000028755	protein_coding	Cda	ENSMUST00000030535	protein_coding	principal1	4	-1	138367992	846
ENSMUSG00000025221	protein_coding	Kcnip2	ENSMUST00000079431	protein_coding	alternative1	19	-1	45816022	2302
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000137690	retained_intron		16	1	20681039	589
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000117497	protein_coding		4	-1	129189609	1053
ENSMUSG00000021285	protein_coding	Ppp1r13b	ENSMUST00000220486	protein_coding		12	-1	111844978	3343
ENSMUSG00000008348	protein_coding	Ubc	ENSMUST00000108707	protein_coding		5	-1	125389186	693
ENSMUSG00000066232	protein_coding	Ipo7	ENSMUST00000208821	retained_intron		7	1	110018315	3867
ENSMUSG00000100984	lincRNA	Gm28357	ENSMUST00000190256	lincRNA		Y	-1	4887558	622
ENSMUSG00000090084	protein_coding	Srpx	ENSMUST00000044789	protein_coding	principal2	X	-1	10117682	2477
ENSMUSG00000072612	antisense	Gm10382	ENSMUST00000238478	antisense		5	1	125389322	1234
ENSMUSG00000079038	protein_coding	D130040H23Rik	ENSMUST00000212549	protein_coding	principal1	8	1	69271080	2002
ENSMUSG00000057534	protein_coding	Elobl	ENSMUST00000061938	protein_coding	principal1	11	-1	88966917	819
ENSMUSG00000072612	antisense	Gm10382	ENSMUST00000100700	antisense		5	1	125389322	1233
ENSMUSG00000041797	protein_coding	Abca9	ENSMUST00000126499	processed_transcript		11	-1	110168055	2454
ENSMUSG00000100137	unprocessed_pseudogene	Gm29352	ENSMUST00000188054	unprocessed_pseudogene		Y	-1	4893402	544
ENSMUSG00000057534	protein_coding	Elobl	ENSMUST00000121228	protein_coding	principal1	11	-1	88966931	704
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000231477	retained_intron		16	1	20683796	339
ENSMUSG00000079038	protein_coding	D130040H23Rik	ENSMUST00000212443	processed_transcript		8	1	69271086	508
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000137992	processed_transcript		4	-1	129189617	2795
ENSMUSG00000057534	protein_coding	Elobl	ENSMUST00000082339	protein_coding		11	-1	88965259	300
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000231598	nonsense_mediated_decay		16	1	20684090	492
ENSMUSG00000066232	protein_coding	Ipo7	ENSMUST00000207277	retained_intron		7	1	110018315	3784
ENSMUSG00000052534	protein_coding	Pbx1	ENSMUST00000176791	retained_intron		1	-1	168432169	4357
ENSMUSG00000117347	unprocessed_pseudogene	Gm18272	ENSMUST00000234431	unprocessed_pseudogene		17	1	32841313	334
ENSMUSG00000074121	protein_coding	Ntf5	ENSMUST00000058879	protein_coding	principal1	7	1	45413695	1963
ENSMUSG00000100958	lincRNA	Gm29351	ENSMUST00000191052	lincRNA		Y	-1	4904050	174
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000122942	processed_transcript		4	-1	129178308	600
ENSMUSG00000021285	protein_coding	Ppp1r13b	ENSMUST00000163747	processed_transcript		12	-1	111908040	770
ENSMUSG00000079038	protein_coding	D130040H23Rik	ENSMUST00000211805	retained_intron		8	1	69271094	2563
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000129958	retained_intron		16	1	20688978	548
ENSMUSG00000045983	protein_coding	Eif4g1	ENSMUST00000073840	protein_coding	alternative2	16	1	20672749	5394
ENSMUSG00000079038	protein_coding	D130040H23Rik	ENSMUST00000078257	protein_coding		8	1	69300776	1218
ENSMUSG00000099575	unprocessed_pseudogene	Gm29350	ENSMUST00000189141	unprocessed_pseudogene		Y	-1	4941396	541
ENSMUSG00000052534	protein_coding	Pbx1	ENSMUST00000072863	protein_coding	alternative1	1	-1	168432169	1709
ENSMUSG00000021285	protein_coding	Ppp1r13b	ENSMUST00000220927	processed_transcript		12	-1	111907619	320
ENSMUSG00000117468	processed_pseudogene	Gm7059	ENSMUST00000234921	processed_pseudogene		17	-1	32853020	816
ENSMUSG00000066232	protein_coding	Ipo7	ENSMUST00000208951	nonsense_mediated_decay		7	1	110018315	1883
ENSMUSG00000117373	transcribed_unprocessed_pseudogene	Gm18273	ENSMUST00000234935	processed_transcript		17	1	32852991	1201
ENSMUSG00000113357	processed_pseudogene	Gm19195	ENSMUST00000222018	processed_pseudogene		12	-1	111861136	511
ENSMUSG00000017204	protein_coding	Gsdma	ENSMUST00000017348	protein_coding	principal1	11	1	98664351	2726
ENSMUSG00000117373	transcribed_unprocessed_pseudogene	Gm18273	ENSMUST00000234058	processed_transcript		17	1	32857606	1052
ENSMUSG00000074121	protein_coding	Ntf5	ENSMUST00000210347	protein_coding		7	1	45413904	989
ENSMUSG00000090084	protein_coding	Srpx	ENSMUST00000115544	protein_coding	alternative2	X	-1	10117709	1865
ENSMUSG00000066232	protein_coding	Ipo7	ENSMUST00000208408	retained_intron		7	1	110030066	4159
ENSMUSG00000117373	transcribed_unprocessed_pseudogene	Gm18273	ENSMUST00000234456	transcribed_unprocessed_pseudogene		17	1	32864599	1702
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000136304	retained_intron		11	-1	102197185	754
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000117350	protein_coding		4	-1	129189626	2241
ENSMUSG00000100597	lincRNA	Gm29349	ENSMUST00000188692	lincRNA		Y	-1	4951897	174
ENSMUSG00000103780	TEC	Gm37524	ENSMUST00000192272	TEC		1	-1	168337671	1692
ENSMUSG00000090084	protein_coding	Srpx	ENSMUST00000115543	protein_coding		X	-1	10117605	1218
ENSMUSG00000117654	lincRNA	Gm50050	ENSMUST00000234587	lincRNA		17	-1	32877942	1195
ENSMUSG00000118377	processed_pseudogene	Gm9276	ENSMUST00000237392	processed_pseudogene		19	1	59087571	1384
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000145540	retained_intron		11	-1	102196558	537
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000126748	processed_transcript		4	-1	129189670	362
ENSMUSG00000102594	TEC	Gm38381	ENSMUST00000193594	TEC		1	-1	168350808	2275
ENSMUSG00000102155	antisense	Gm37468	ENSMUST00000194767	antisense		3	1	15547479	854
ENSMUSG00000026810	protein_coding	Dpm2	ENSMUST00000140592	protein_coding		2	1	32570858	1412
ENSMUSG00000043262	protein_coding	Uevld	ENSMUST00000094398	protein_coding	principal1	7	-1	46958527	4616
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000142490	processed_transcript		4	-1	129189498	302
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000140962	protein_coding		11	-1	102196568	427
ENSMUSG00000108967	lincRNA	Gm45181	ENSMUST00000207878	lincRNA		7	1	145162996	449
ENSMUSG00000113175	transcribed_unprocessed_pseudogene	Gm9973	ENSMUST00000221569	processed_transcript		13	-1	4391265	683
ENSMUSG00000113175	transcribed_unprocessed_pseudogene	Gm9973	ENSMUST00000223449	processed_transcript		13	-1	4391265	849
ENSMUSG00000104616	processed_pseudogene	Gm6069	ENSMUST00000196501	processed_pseudogene		3	1	41485733	463
ENSMUSG00000009905	protein_coding	Kdsr	ENSMUST00000010049	protein_coding	principal1	1	-1	106759727	5518
ENSMUSG00000031097	protein_coding	Tnni2	ENSMUST00000105971	protein_coding	principal1	7	1	142441808	732
ENSMUSG00000090084	protein_coding	Srpx	ENSMUST00000147334	processed_transcript		X	-1	10117676	441
ENSMUSG00000097639	lincRNA	Platr4	ENSMUST00000198593	lincRNA		3	-1	41488476	497
ENSMUSG00000113175	transcribed_unprocessed_pseudogene	Gm9973	ENSMUST00000221251	processed_transcript		13	-1	4382411	1882
ENSMUSG00000113175	transcribed_unprocessed_pseudogene	Gm9973	ENSMUST00000220926	transcribed_unprocessed_pseudogene		13	-1	4382696	166
ENSMUSG00000097639	lincRNA	Platr4	ENSMUST00000199155	lincRNA		3	-1	41493190	2161
ENSMUSG00000031097	protein_coding	Tnni2	ENSMUST00000145287	protein_coding		7	1	142441816	507
ENSMUSG00000113175	transcribed_unprocessed_pseudogene	Gm9973	ENSMUST00000220662	retained_intron		13	-1	4391244	1908
ENSMUSG00000097639	lincRNA	Platr4	ENSMUST00000181833	lincRNA		3	-1	41493192	986
ENSMUSG00000043262	protein_coding	Uevld	ENSMUST00000207986	nonsense_mediated_decay		7	-1	46958527	4425
ENSMUSG00000009905	protein_coding	Kdsr	ENSMUST00000187319	retained_intron		1	-1	106759699	640
ENSMUSG00000040928	protein_coding	S100pbp	ENSMUST00000049081	protein_coding	principal1	4	-1	129182530	2769
ENSMUSG00000002343	protein_coding	Armc6	ENSMUST00000019679	protein_coding	principal1	8	-1	70234466	2263
ENSMUSG00000009905	protein_coding	Kdsr	ENSMUST00000187617	retained_intron		1	-1	106759683	2582
ENSMUSG00000113004	processed_pseudogene	Gm47951	ENSMUST00000221635	processed_pseudogene		13	1	4368681	3737
ENSMUSG00000043262	protein_coding	Uevld	ENSMUST00000210227	nonsense_mediated_decay		7	-1	46958462	478
ENSMUSG00000086389	antisense	Gm15998	ENSMUST00000135144	antisense		3	1	89315439	1844
ENSMUSG00000112399	lincRNA	Gm32235	ENSMUST00000218563	lincRNA		10	1	117559099	1024
ENSMUSG00000031097	protein_coding	Tnni2	ENSMUST00000149529	protein_coding	principal1	7	1	142442330	768
ENSMUSG00000026810	protein_coding	Dpm2	ENSMUST00000028151	protein_coding	principal1	2	1	32570858	869
ENSMUSG00000002343	protein_coding	Armc6	ENSMUST00000139765	retained_intron		8	-1	70222789	1090
ENSMUSG00000099410	unprocessed_pseudogene	Gm29355	ENSMUST00000188178	unprocessed_pseudogene		Y	1	5002140	697
ENSMUSG00000112399	lincRNA	Gm32235	ENSMUST00000220286	lincRNA		10	1	117559124	898
ENSMUSG00000002343	protein_coding	Armc6	ENSMUST00000136666	retained_intron		8	-1	70222290	586
ENSMUSG00000031576	protein_coding	Kcnu1	ENSMUST00000098858	protein_coding	principal1	8	1	25849623	3536
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000145363	processed_transcript		5	1	115925641	5974
ENSMUSG00000112081	processed_pseudogene	Gm9004	ENSMUST00000218739	processed_pseudogene		10	-1	117589335	1222
ENSMUSG00000043262	protein_coding	Uevld	ENSMUST00000207738	retained_intron		7	-1	46956037	3226
ENSMUSG00000030205	protein_coding	Gprc5d	ENSMUST00000032327	protein_coding		6	-1	135118246	1348
ENSMUSG00000002343	protein_coding	Armc6	ENSMUST00000147387	retained_intron		8	-1	70225177	782
ENSMUSG00000070699	protein_coding	Sars2	ENSMUST00000094632	protein_coding	principal1	7	1	28742002	1868
ENSMUSG00000030787	protein_coding	Lyve1	ENSMUST00000033050	protein_coding	principal1	7	-1	110863239	2893
ENSMUSG00000093927	protein_coding	Gm20918	ENSMUST00000188637	protein_coding	principal1	Y	1	5043937	1227
ENSMUSG00000106223	lincRNA	2400006E01Rik	ENSMUST00000198272	lincRNA		3	-1	41528444	474
ENSMUSG00000093927	protein_coding	Gm20918	ENSMUST00000179629	protein_coding	principal1	Y	1	5045445	684
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000147479	processed_transcript		5	1	115926086	5016
ENSMUSG00000026810	protein_coding	Dpm2	ENSMUST00000128039	retained_intron		2	1	32570867	655
ENSMUSG00000002343	protein_coding	Armc6	ENSMUST00000135931	retained_intron		8	-1	70234449	1414
ENSMUSG00000043262	protein_coding	Uevld	ENSMUST00000208388	retained_intron		7	-1	46958472	801
ENSMUSG00000031576	protein_coding	Kcnu1	ENSMUST00000210273	retained_intron		8	1	25862436	549
ENSMUSG00000106223	lincRNA	2400006E01Rik	ENSMUST00000199633	lincRNA		3	-1	41528474	643
ENSMUSG00000031097	protein_coding	Tnni2	ENSMUST00000129618	retained_intron		7	1	142442908	895
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000139881	processed_transcript		5	1	115933645	699
ENSMUSG00000043262	protein_coding	Uevld	ENSMUST00000208308	nonsense_mediated_decay		7	-1	46958501	532
ENSMUSG00000070699	protein_coding	Sars2	ENSMUST00000207897	retained_intron		7	1	28742008	1790
ENSMUSG00000006270	protein_coding	Vax1	ENSMUST00000172821	protein_coding	principal1	19	-1	59170056	1044
ENSMUSG00000031097	protein_coding	Tnni2	ENSMUST00000131034	retained_intron		7	1	142442980	790
ENSMUSG00000039013	protein_coding	Siglecf	ENSMUST00000145867	retained_intron		7	1	43351341	2570
ENSMUSG00000106223	lincRNA	2400006E01Rik	ENSMUST00000197509	lincRNA		3	-1	41523217	443
ENSMUSG00000026810	protein_coding	Dpm2	ENSMUST00000150419	retained_intron		2	1	32572047	851
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000150965	retained_intron		11	-1	102197868	1008
ENSMUSG00000002343	protein_coding	Armc6	ENSMUST00000130319	protein_coding		8	-1	70234126	547
ENSMUSG00000101212	unprocessed_pseudogene	Gm29354	ENSMUST00000187613	unprocessed_pseudogene		Y	1	5146887	696
ENSMUSG00000030787	protein_coding	Lyve1	ENSMUST00000209319	retained_intron		7	-1	110862953	802
ENSMUSG00000031097	protein_coding	Tnni2	ENSMUST00000210239	protein_coding		7	1	142443171	518
ENSMUSG00000109231	TEC	Gm45737	ENSMUST00000208344	TEC		7	-1	46929424	1612
ENSMUSG00000004344	protein_coding	Gpx5	ENSMUST00000110491	protein_coding	principal1	13	-1	21292731	1674
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000122877	retained_intron		5	1	115945297	4398
ENSMUSG00000031576	protein_coding	Kcnu1	ENSMUST00000120653	protein_coding		8	1	25911680	1446
ENSMUSG00000101041	lincRNA	Gm29353	ENSMUST00000185801	lincRNA		Y	-1	5237553	620
ENSMUSG00000006270	protein_coding	Vax1	ENSMUST00000173710	processed_transcript		19	-1	59166980	250
ENSMUSG00000031097	protein_coding	Tnni2	ENSMUST00000105973	protein_coding		7	1	142443171	668
ENSMUSG00000043800	transcribed_processed_pseudogene	Kifc5c-ps	ENSMUST00000179040	transcribed_processed_pseudogene		10	1	117594353	1530
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000136780	processed_transcript		5	1	115951090	287
ENSMUSG00000030205	protein_coding	Gprc5d	ENSMUST00000111922	protein_coding	principal1	6	-1	135118283	1317
ENSMUSG00000063129	protein_coding	Aldoart2	ENSMUST00000080123	protein_coding	principal1	12	1	55565239	1658
ENSMUSG00000118417	unprocessed_pseudogene	Gm50460	ENSMUST00000238760	unprocessed_pseudogene		Y	-1	5248337	543
ENSMUSG00000043800	transcribed_processed_pseudogene	Kifc5c-ps	ENSMUST00000179611	processed_transcript		10	1	117594726	563
ENSMUSG00000031097	protein_coding	Tnni2	ENSMUST00000211192	processed_transcript		7	1	142443777	345
ENSMUSG00000112476	lincRNA	Gm32365	ENSMUST00000220053	lincRNA		10	1	117614405	1749
ENSMUSG00000031576	protein_coding	Kcnu1	ENSMUST00000126226	protein_coding		8	1	25911692	697
ENSMUSG00000108191	processed_pseudogene	Gm29803	ENSMUST00000205069	processed_pseudogene		6	-1	135134452	375
ENSMUSG00000112476	lincRNA	Gm32365	ENSMUST00000217828	lincRNA		10	1	117614629	1422
ENSMUSG00000114607	processed_pseudogene	Gm8990	ENSMUST00000225465	processed_pseudogene		13	-1	108310750	1549
ENSMUSG00000079168	protein_coding	Cd209g	ENSMUST00000207281	retained_intron		8	1	4134098	3419
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000123736	nonsense_mediated_decay		5	1	115968025	3487
ENSMUSG00000107748	protein_coding	Olfr766-ps1	ENSMUST00000204515	protein_coding	principal1	10	-1	129068977	2909
ENSMUSG00000090358	processed_transcript	Gm2822	ENSMUST00000164299	processed_transcript		13	-1	108316273	2910
ENSMUSG00000029516	protein_coding	Cit	ENSMUST00000134609	retained_intron		5	1	115987174	3456
ENSMUSG00000099750	processed_pseudogene	Gm18827	ENSMUST00000188341	processed_pseudogene		12	1	91482053	790
ENSMUSG00000045440	protein_coding	Insm2	ENSMUST00000051857	protein_coding	principal1	12	1	55599427	2660
ENSMUSG00000024553	protein_coding	Galr1	ENSMUST00000065224	protein_coding	principal1	18	-1	82406777	2987
ENSMUSG00000107263	TEC	Gm42471	ENSMUST00000201457	TEC		5	1	115902430	1865
ENSMUSG00000042333	protein_coding	Tnfrsf14	ENSMUST00000219534	protein_coding	alternative2	4	-1	154928077	1173
ENSMUSG00000059762	protein_coding	Olfr767	ENSMUST00000213579	protein_coding	principal1	10	-1	129082910	5493
ENSMUSG00000028039	protein_coding	Efna3	ENSMUST00000029673	protein_coding	principal2	3	-1	89322965	2363
ENSMUSG00000020963	protein_coding	Tshr	ENSMUST00000222686	processed_transcript		12	1	91384563	545
ENSMUSG00000059762	protein_coding	Olfr767	ENSMUST00000082131	protein_coding	principal1	10	-1	129080057	1086
ENSMUSG00000118256	processed_pseudogene	Gm50303	ENSMUST00000237372	processed_pseudogene		18	1	82414365	673
ENSMUSG00000095028	protein_coding	Sirpb1b	ENSMUST00000192382	protein_coding	alternative2	3	-1	15574985	1437
ENSMUSG00000015947	protein_coding	Fcgr1	ENSMUST00000029748	protein_coding	principal1	3	-1	96293969	2589
ENSMUSG00000028039	protein_coding	Efna3	ENSMUST00000200436	protein_coding	alternative2	3	-1	89322887	742
ENSMUSG00000090451	protein_coding	Gm6133	ENSMUST00000164064	protein_coding	principal1	18	1	78349754	948
ENSMUSG00000073616	protein_coding	Cops9	ENSMUST00000154129	retained_intron		1	-1	92639909	482
ENSMUSG00000035967	protein_coding	Ints6l	ENSMUST00000134138	processed_transcript		X	1	56454857	7170
ENSMUSG00000050198	protein_coding	Olfr768	ENSMUST00000216681	processed_transcript		10	-1	129099334	4555
ENSMUSG00000050198	protein_coding	Olfr768	ENSMUST00000216212	processed_transcript		10	-1	129099375	3892
ENSMUSG00000050198	protein_coding	Olfr768	ENSMUST00000063031	protein_coding	principal1	10	-1	129093972	939
ENSMUSG00000028039	protein_coding	Efna3	ENSMUST00000139439	processed_transcript		3	-1	89321631	454
ENSMUSG00000036333	protein_coding	Kidins220	ENSMUST00000066652	protein_coding		12	1	24974925	7409
ENSMUSG00000015947	protein_coding	Fcgr1	ENSMUST00000200420	nonsense_mediated_decay		3	-1	96293933	600
ENSMUSG00000042333	protein_coding	Tnfrsf14	ENSMUST00000123514	protein_coding	principal2	4	-1	154928202	1018
ENSMUSG00000079168	protein_coding	Cd209g	ENSMUST00000130372	protein_coding	principal1	8	1	4134652	1169
ENSMUSG00000095028	protein_coding	Sirpb1b	ENSMUST00000091319	protein_coding	principal2	3	-1	15575065	1499
ENSMUSG00000028386	protein_coding	Slc46a2	ENSMUST00000030081	protein_coding	principal1	4	-1	59915056	2833
ENSMUSG00000021553	protein_coding	Slc28a3	ENSMUST00000140760	nonsense_mediated_decay		13	-1	58558267	757
ENSMUSG00000100459	lincRNA	Gm5833	ENSMUST00000190707	lincRNA		1	-1	138682077	1932
ENSMUSG00000042801	protein_coding	Olfr769	ENSMUST00000215453	protein_coding	principal1	10	-1	129117861	4143
ENSMUSG00000097739	transcribed_unprocessed_pseudogene	Gm2539	ENSMUST00000180720	processed_transcript		10	1	22074237	2411
ENSMUSG00000036333	protein_coding	Kidins220	ENSMUST00000221378	retained_intron		12	1	24974929	1115
ENSMUSG00000042333	protein_coding	Tnfrsf14	ENSMUST00000152687	protein_coding		4	-1	154928552	684
ENSMUSG00000100459	lincRNA	Gm5833	ENSMUST00000186285	lincRNA		1	-1	138682065	524
ENSMUSG00000097739	transcribed_unprocessed_pseudogene	Gm2539	ENSMUST00000180781	processed_transcript		10	1	22089597	379
ENSMUSG00000030116	protein_coding	Mfap5	ENSMUST00000125728	protein_coding		6	1	122505845	328
ENSMUSG00000042801	protein_coding	Olfr769	ENSMUST00000216906	protein_coding	principal1	10	-1	129117861	4325
ENSMUSG00000036333	protein_coding	Kidins220	ENSMUST00000220459	protein_coding		12	1	24974972	5381
ENSMUSG00000042333	protein_coding	Tnfrsf14	ENSMUST00000137803	protein_coding		4	-1	154928552	689
ENSMUSG00000007817	protein_coding	Zmiz1	ENSMUST00000162645	protein_coding	principal3	14	1	25459224	7482
ENSMUSG00000097739	transcribed_unprocessed_pseudogene	Gm2539	ENSMUST00000181352	transcribed_unprocessed_pseudogene		10	1	22100651	746
ENSMUSG00000042801	protein_coding	Olfr769	ENSMUST00000050915	protein_coding	principal1	10	-1	129112511	1084
ENSMUSG00000036333	protein_coding	Kidins220	ENSMUST00000222941	protein_coding	principal1	12	1	24974993	6277
ENSMUSG00000042333	protein_coding	Tnfrsf14	ENSMUST00000145296	protein_coding		4	-1	154928563	394
ENSMUSG00000095028	protein_coding	Sirpb1b	ENSMUST00000193767	retained_intron		3	-1	15575024	2515
ENSMUSG00000073616	protein_coding	Cops9	ENSMUST00000112999	protein_coding		1	-1	92640564	653
ENSMUSG00000095028	protein_coding	Sirpb1b	ENSMUST00000195778	protein_coding		3	-1	15574991	588
ENSMUSG00000007817	protein_coding	Zmiz1	ENSMUST00000007961	protein_coding	alternative1	14	1	25459267	5397
ENSMUSG00000095325	protein_coding	Zfp870	ENSMUST00000228075	protein_coding	principal1	17	-1	32891642	5337
ENSMUSG00000036333	protein_coding	Kidins220	ENSMUST00000222013	protein_coding		12	1	24992218	3998
ENSMUSG00000095522	protein_coding	Aadacl2fm3	ENSMUST00000194941	unprocessed_pseudogene		3	1	59861051	1206
ENSMUSG00000095325	protein_coding	Zfp870	ENSMUST00000235054	protein_coding		17	-1	32891533	524
ENSMUSG00000036333	protein_coding	Kidins220	ENSMUST00000221050	retained_intron		12	1	24992290	636
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000149087	retained_intron		11	-1	102218929	5406
ENSMUSG00000073616	protein_coding	Cops9	ENSMUST00000148508	nonsense_mediated_decay		1	-1	92641923	649
ENSMUSG00000095522	protein_coding	Aadacl2fm3	ENSMUST00000179799	protein_coding	principal1	3	1	59861051	1206
ENSMUSG00000095325	protein_coding	Zfp870	ENSMUST00000228410	processed_transcript		17	-1	32891590	754
ENSMUSG00000078235	protein_coding	Fam43b	ENSMUST00000105032	protein_coding	principal1	4	-1	138396528	2437
ENSMUSG00000095325	protein_coding	Zfp870	ENSMUST00000178401	protein_coding		17	-1	32886083	5126
ENSMUSG00000117601	antisense	Gm50051	ENSMUST00000234398	antisense		17	1	32879221	438
ENSMUSG00000024552	protein_coding	Slc14a2	ENSMUST00000237290	protein_coding		18	-1	78179134	2863
ENSMUSG00000073616	protein_coding	Cops9	ENSMUST00000097642	protein_coding	principal1	1	-1	92641985	438
ENSMUSG00000036333	protein_coding	Kidins220	ENSMUST00000221423	retained_intron		12	1	25016986	947
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000124077	nonsense_mediated_decay		11	-1	102230139	3872
ENSMUSG00000046109	antisense	AB041806	ENSMUST00000062902	antisense		4	1	138395198	2105
ENSMUSG00000036333	protein_coding	Kidins220	ENSMUST00000220622	processed_transcript		12	1	25018519	736
ENSMUSG00000073616	protein_coding	Cops9	ENSMUST00000129730	retained_intron		1	-1	92641985	496
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000107150	protein_coding	alternative2	11	-1	102230136	3759
ENSMUSG00000036333	protein_coding	Kidins220	ENSMUST00000221622	processed_transcript		12	1	25052692	440
ENSMUSG00000073245	protein_coding	Gm14819	ENSMUST00000101645	protein_coding	principal1	X	1	35404183	928
ENSMUSG00000036333	protein_coding	Kidins220	ENSMUST00000222481	protein_coding		12	1	25053992	627
ENSMUSG00000073245	protein_coding	Gm14819	ENSMUST00000169396	protein_coding	principal1	X	1	35405794	639
ENSMUSG00000115826	processed_pseudogene	Gm49034	ENSMUST00000227262	processed_pseudogene		14	-1	35219438	300
ENSMUSG00000020176	protein_coding	Grb10	ENSMUST00000150972	protein_coding		11	-1	12026324	940
ENSMUSG00000007817	protein_coding	Zmiz1	ENSMUST00000159766	retained_intron		14	1	25459292	4314
ENSMUSG00000085955	processed_transcript	Gm12356	ENSMUST00000122854	processed_transcript		11	-1	98683415	353
ENSMUSG00000020176	protein_coding	Grb10	ENSMUST00000143915	protein_coding		11	-1	12026732	430
ENSMUSG00000007817	protein_coding	Zmiz1	ENSMUST00000160680	processed_transcript		14	1	25502655	342
ENSMUSG00000109515	lincRNA	Gm31343	ENSMUST00000207967	lincRNA		8	1	8377090	2454
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000107152	protein_coding	principal3	11	-1	102230166	3788
ENSMUSG00000007817	protein_coding	Zmiz1	ENSMUST00000160190	processed_transcript		14	1	25607357	359
ENSMUSG00000108913	processed_pseudogene	Gm2448	ENSMUST00000207080	processed_pseudogene		8	-1	8455429	559
ENSMUSG00000032968	protein_coding	Inha	ENSMUST00000037330	protein_coding	principal1	1	1	75507077	1475
ENSMUSG00000007817	protein_coding	Zmiz1	ENSMUST00000160229	processed_transcript		14	1	25607838	930
ENSMUSG00000109566	lincRNA	Gm31401	ENSMUST00000207352	lincRNA		8	1	8066666	734
ENSMUSG00000109134	lincRNA	Gm45076	ENSMUST00000207517	lincRNA		8	-1	8336213	1517
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000137787	retained_intron		11	-1	102198079	851
ENSMUSG00000083326	processed_pseudogene	Rpl38-ps1	ENSMUST00000117723	processed_pseudogene		4	1	138425788	215
ENSMUSG00000007817	protein_coding	Zmiz1	ENSMUST00000162546	retained_intron		14	1	25656830	460
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000140481	retained_intron		11	-1	102198895	814
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000155065	retained_intron		11	-1	102199493	695
ENSMUSG00000060572	protein_coding	Mfap2	ENSMUST00000166376	protein_coding	principal1	4	1	141010418	890
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000126453	retained_intron		11	-1	102200357	644
ENSMUSG00000114709	sense_intronic	Gm47920	ENSMUST00000225058	sense_intronic		14	1	25459980	1476
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000133651	retained_intron		11	-1	102200816	672
ENSMUSG00000109127	lincRNA	Gm31135	ENSMUST00000208946	lincRNA		8	-1	8484721	1155
ENSMUSG00000114539	sense_intronic	Gm47921	ENSMUST00000224666	sense_intronic		14	1	25480054	328
ENSMUSG00000109127	lincRNA	Gm31135	ENSMUST00000208460	lincRNA		8	-1	8484730	1782
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000156337	protein_coding		11	-1	102230142	692
ENSMUSG00000081766	transcribed_processed_pseudogene	2210409E12Rik	ENSMUST00000122062	transcribed_processed_pseudogene		11	1	88972657	346
ENSMUSG00000114232	lincRNA	Gm17747	ENSMUST00000224582	lincRNA		14	1	25441641	610
ENSMUSG00000023336	protein_coding	Wfdc1	ENSMUST00000212901	protein_coding	alternative2	8	1	119666365	921
ENSMUSG00000020176	protein_coding	Grb10	ENSMUST00000143386	protein_coding		11	-1	12038683	761
ENSMUSG00000109056	lincRNA	A630009H07Rik	ENSMUST00000208485	lincRNA		8	1	8335077	2159
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000131254	protein_coding		11	-1	102218928	721
ENSMUSG00000104707	processed_pseudogene	Gm43649	ENSMUST00000196596	processed_pseudogene		5	1	136896644	391
ENSMUSG00000060572	protein_coding	Mfap2	ENSMUST00000124506	processed_transcript		4	1	141010637	506
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000150683	retained_intron		11	-1	102218929	650
ENSMUSG00000041078	protein_coding	Grid1	ENSMUST00000043349	protein_coding	principal1	14	1	34820108	5720
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000128686	processed_transcript		11	-1	102230133	422
ENSMUSG00000104587	TEC	Gm43161	ENSMUST00000197020	TEC		5	1	28577273	1688
ENSMUSG00000118485	processed_pseudogene	Gm50487	ENSMUST00000238776	processed_pseudogene		16	1	46086475	454
ENSMUSG00000008855	protein_coding	Hdac5	ENSMUST00000125072	processed_transcript		11	-1	102230146	493
ENSMUSG00000041078	protein_coding	Grid1	ENSMUST00000227253	processed_transcript		14	1	35450348	339
ENSMUSG00000041078	protein_coding	Grid1	ENSMUST00000173307	processed_transcript		14	1	35569994	825
ENSMUSG00000115277	processed_pseudogene	Gm19016	ENSMUST00000227874	processed_pseudogene		14	-1	35549126	816
ENSMUSG00000060572	protein_coding	Mfap2	ENSMUST00000071977	protein_coding	principal1	4	1	141010644	1073
ENSMUSG00000103152	processed_pseudogene	Gm8790	ENSMUST00000194108	processed_pseudogene		1	-1	138689845	322
ENSMUSG00000021553	protein_coding	Slc28a3	ENSMUST00000022036	protein_coding	principal1	13	-1	58610877	4567
ENSMUSG00000039449	protein_coding	Prpf18	ENSMUST00000035721	protein_coding	principal1	2	-1	4652086	3522
ENSMUSG00000002633	protein_coding	Shh	ENSMUST00000002708	protein_coding	principal1	5	-1	28467256	2847
ENSMUSG00000105775	processed_pseudogene	Gm10290	ENSMUST00000200451	processed_pseudogene		5	1	28538570	999
ENSMUSG00000023336	protein_coding	Wfdc1	ENSMUST00000024107	protein_coding	principal2	8	1	119666365	1371
ENSMUSG00000062345	protein_coding	Serpinb2	ENSMUST00000009356	protein_coding	principal1	1	1	107511423	1970
ENSMUSG00000021553	protein_coding	Slc28a3	ENSMUST00000224906	processed_transcript		13	-1	58610877	662
ENSMUSG00000021553	protein_coding	Slc28a3	ENSMUST00000148396	nonsense_mediated_decay		13	-1	58610877	1709
ENSMUSG00000033983	protein_coding	Coil	ENSMUST00000107898	protein_coding	alternative2	11	1	88970252	3120
ENSMUSG00000020963	protein_coding	Tshr	ENSMUST00000221216	protein_coding		12	1	91384566	1638
ENSMUSG00000062345	protein_coding	Serpinb2	ENSMUST00000064916	protein_coding	principal1	1	1	107511497	1996
ENSMUSG00000110453	antisense	Gm32352	ENSMUST00000212465	antisense		8	-1	119670881	688
ENSMUSG00000021553	protein_coding	Slc28a3	ENSMUST00000151675	retained_intron		13	-1	58610869	1762
ENSMUSG00000033983	protein_coding	Coil	ENSMUST00000140549	retained_intron		11	1	88987579	776
ENSMUSG00000097726	antisense	9530036O11Rik	ENSMUST00000180878	antisense		5	1	28458274	876
ENSMUSG00000114234	processed_pseudogene	Gm3131	ENSMUST00000223882	processed_pseudogene		13	1	58546028	475
ENSMUSG00000104355	IG_V_pseudogene	Gm7003	ENSMUST00000195089	IG_V_pseudogene		12	-1	113803333	312
ENSMUSG00000062345	protein_coding	Serpinb2	ENSMUST00000143832	nonsense_mediated_decay		1	1	107522230	757
ENSMUSG00000033983	protein_coding	Coil	ENSMUST00000036649	protein_coding	principal2	11	1	88973935	2607
ENSMUSG00000062345	protein_coding	Serpinb2	ENSMUST00000146597	nonsense_mediated_decay		1	1	107523944	347
ENSMUSG00000039449	protein_coding	Prpf18	ENSMUST00000153881	processed_transcript		2	-1	4652106	3295
ENSMUSG00000097726	antisense	9530036O11Rik	ENSMUST00000181202	antisense		5	1	28466984	2926
ENSMUSG00000082745	unprocessed_pseudogene	Gm15181	ENSMUST00000120142	unprocessed_pseudogene		1	-1	75514283	177
ENSMUSG00000039013	protein_coding	Siglecf	ENSMUST00000012798	protein_coding	principal3	7	1	43351341	2510
ENSMUSG00000033871	protein_coding	Ppargc1b	ENSMUST00000075299	protein_coding	principal2	18	-1	61400431	3656
ENSMUSG00000096824	IG_V_gene	Ighv2-7	ENSMUST00000103456	IG_V_gene	principal1	12	-1	113807752	355
ENSMUSG00000039449	protein_coding	Prpf18	ENSMUST00000152362	protein_coding	principal1	2	-1	4652113	1579
ENSMUSG00000039013	protein_coding	Siglecf	ENSMUST00000125335	processed_transcript		7	1	43351383	367
ENSMUSG00000108941	lincRNA	D530014G21Rik	ENSMUST00000208416	lincRNA		8	1	8488302	587
ENSMUSG00000033871	protein_coding	Ppargc1b	ENSMUST00000063307	protein_coding	alternative2	18	-1	61400400	3330
ENSMUSG00000039449	protein_coding	Prpf18	ENSMUST00000192470	protein_coding		2	-1	4652081	553
ENSMUSG00000033871	protein_coding	Ppargc1b	ENSMUST00000142134	processed_transcript		18	-1	61400400	366
ENSMUSG00000108932	lincRNA	Gm31463	ENSMUST00000208799	lincRNA		8	1	8576522	1479
ENSMUSG00000039449	protein_coding	Prpf18	ENSMUST00000140818	processed_transcript		2	-1	4652087	551
ENSMUSG00000039013	protein_coding	Siglecf	ENSMUST00000122423	protein_coding	principal3	7	1	43351408	2607
ENSMUSG00000017221	protein_coding	Psmd3	ENSMUST00000017365	protein_coding	principal1	11	1	98682554	2148
ENSMUSG00000039449	protein_coding	Prpf18	ENSMUST00000144650	processed_transcript		2	-1	4652103	496
ENSMUSG00000092572	polymorphic_pseudogene	Serpinb10	ENSMUST00000182198	protein_coding	principal1	1	1	107529003	1265
ENSMUSG00000039013	protein_coding	Siglecf	ENSMUST00000206299	protein_coding	alternative2	7	1	43351522	2149
ENSMUSG00000101611	unprocessed_pseudogene	Gm29357	ENSMUST00000186877	unprocessed_pseudogene		Y	1	5286082	698
ENSMUSG00000039013	protein_coding	Siglecf	ENSMUST00000121494	protein_coding	alternative2	7	1	43351548	1572
ENSMUSG00000101769	processed_pseudogene	Gm29356	ENSMUST00000186935	processed_pseudogene		Y	1	5320598	373
ENSMUSG00000110514	processed_pseudogene	Gm7688	ENSMUST00000212857	processed_pseudogene		8	1	69329218	337
ENSMUSG00000024552	protein_coding	Slc14a2	ENSMUST00000237674	protein_coding	principal1	18	-1	78596942	4033
ENSMUSG00000100792	unprocessed_pseudogene	Gm29161	ENSMUST00000188250	unprocessed_pseudogene		Y	1	5340177	699
ENSMUSG00000092572	polymorphic_pseudogene	Serpinb10	ENSMUST00000172762	processed_transcript		1	1	107529027	3466
ENSMUSG00000017221	protein_coding	Psmd3	ENSMUST00000149489	retained_intron		11	1	98682565	2894
ENSMUSG00000092572	polymorphic_pseudogene	Serpinb10	ENSMUST00000194951	polymorphic_pseudogene		1	1	107532371	1194
ENSMUSG00000024406	protein_coding	Pou5f1	ENSMUST00000025271	protein_coding	principal1	17	1	35506018	1362
ENSMUSG00000020963	protein_coding	Tshr	ENSMUST00000021346	protein_coding	principal1	12	1	91400994	4311
ENSMUSG00000018570	protein_coding	2810408A11Rik	ENSMUST00000100969	protein_coding	alternative2	11	-1	69900894	1437
ENSMUSG00000039385	protein_coding	Cdh6	ENSMUST00000036439	protein_coding	principal1	15	-1	13173675	8167
ENSMUSG00000017221	protein_coding	Psmd3	ENSMUST00000152102	retained_intron		11	1	98682591	2850
ENSMUSG00000030207	protein_coding	Fam234b	ENSMUST00000111915	protein_coding	principal1	6	1	135197977	4221
ENSMUSG00000017221	protein_coding	Psmd3	ENSMUST00000123676	protein_coding		11	1	98687787	666
ENSMUSG00000110444	protein_coding	Gm10033	ENSMUST00000072427	protein_coding	alternative2	8	-1	69395522	7668
ENSMUSG00000017221	protein_coding	Psmd3	ENSMUST00000142790	retained_intron		11	1	98690461	747
ENSMUSG00000039385	protein_coding	Cdh6	ENSMUST00000226917	retained_intron		15	-1	13173675	1795
ENSMUSG00000030207	protein_coding	Fam234b	ENSMUST00000111916	protein_coding		6	1	135197977	2927
ENSMUSG00000110444	protein_coding	Gm10033	ENSMUST00000213012	protein_coding		8	-1	69395522	7778
ENSMUSG00000110444	protein_coding	Gm10033	ENSMUST00000239456	protein_coding	principal5	8	-1	69395539	7793
ENSMUSG00000030207	protein_coding	Fam234b	ENSMUST00000130612	protein_coding		6	1	135198109	357
ENSMUSG00000024552	protein_coding	Slc14a2	ENSMUST00000236281	retained_intron		18	-1	78184758	2643
ENSMUSG00000020963	protein_coding	Tshr	ENSMUST00000021343	protein_coding		12	1	91401000	1339
ENSMUSG00000110444	protein_coding	Gm10033	ENSMUST00000211954	processed_transcript		8	-1	69395528	2147
ENSMUSG00000030207	protein_coding	Fam234b	ENSMUST00000151071	protein_coding		6	1	135198412	352
ENSMUSG00000110444	protein_coding	Gm10033	ENSMUST00000211874	processed_transcript		8	-1	69395539	928
ENSMUSG00000110444	protein_coding	Gm10033	ENSMUST00000239413	protein_coding		8	-1	69373383	654
ENSMUSG00000110444	protein_coding	Gm10033	ENSMUST00000239492	protein_coding		8	-1	69373914	387
ENSMUSG00000028514	protein_coding	Usp24	ENSMUST00000106798	retained_intron		4	1	106316220	3179
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000074113	protein_coding	alternative2	5	-1	44101954	3966
ENSMUSG00000020963	protein_coding	Tshr	ENSMUST00000186437	protein_coding		12	1	91538066	636
ENSMUSG00000030207	protein_coding	Fam234b	ENSMUST00000151951	retained_intron		6	1	135231601	4136
ENSMUSG00000110474	lincRNA	Gm45848	ENSMUST00000212932	lincRNA		8	1	69419497	1871
ENSMUSG00000108239	antisense	Gm19434	ENSMUST00000204330	antisense		6	1	135188480	2573
ENSMUSG00000024552	protein_coding	Slc14a2	ENSMUST00000163367	protein_coding		18	-1	78206440	1424
ENSMUSG00000107280	protein_coding	Gm9495	ENSMUST00000200846	protein_coding	principal1	8	-1	69453565	2512
ENSMUSG00000030116	protein_coding	Mfap5	ENSMUST00000032210	protein_coding		6	1	122513583	946
ENSMUSG00000024406	protein_coding	Pou5f1	ENSMUST00000173934	protein_coding		17	1	35507482	994
ENSMUSG00000024406	protein_coding	Pou5f1	ENSMUST00000172651	protein_coding		17	1	35508805	435
ENSMUSG00000110536	processed_pseudogene	Gm45850	ENSMUST00000212536	processed_pseudogene		8	1	69470069	338
ENSMUSG00000021286	protein_coding	Zfyve21	ENSMUST00000021714	protein_coding	principal2	12	1	111814170	1308
ENSMUSG00000024552	protein_coding	Slc14a2	ENSMUST00000235389	protein_coding		18	-1	78596851	1951
ENSMUSG00000024406	protein_coding	Pou5f1	ENSMUST00000173805	protein_coding		17	1	35508807	496
ENSMUSG00000018570	protein_coding	2810408A11Rik	ENSMUST00000108621	protein_coding	alternative2	11	-1	69900886	1455
ENSMUSG00000112766	antisense	Gm40645	ENSMUST00000219828	antisense		10	-1	51522447	874
ENSMUSG00000112766	antisense	Gm40645	ENSMUST00000218413	antisense		10	-1	51522447	745
ENSMUSG00000024406	protein_coding	Pou5f1	ENSMUST00000173256	protein_coding		17	1	35508817	462
ENSMUSG00000112031	processed_pseudogene	Gm48484	ENSMUST00000218214	processed_pseudogene		10	1	51511874	289
ENSMUSG00000050141	protein_coding	Fam205c	ENSMUST00000055944	protein_coding	principal2	4	-1	42874203	1655
ENSMUSG00000024552	protein_coding	Slc14a2	ENSMUST00000025434	protein_coding	principal1	18	-1	78209094	2793
ENSMUSG00000024406	protein_coding	Pou5f1	ENSMUST00000174782	protein_coding		17	1	35508821	688
ENSMUSG00000117661	antisense	4931439C15Rik	ENSMUST00000238077	antisense		18	1	78476878	1711
ENSMUSG00000018570	protein_coding	2810408A11Rik	ENSMUST00000018714	protein_coding	alternative2	11	-1	69900938	1485
ENSMUSG00000093516	antisense	Gm19553	ENSMUST00000175723	antisense		17	-1	35510551	494
ENSMUSG00000021286	protein_coding	Zfyve21	ENSMUST00000223211	protein_coding		12	1	111814208	794
ENSMUSG00000117661	antisense	4931439C15Rik	ENSMUST00000235470	antisense		18	1	78477150	2954
ENSMUSG00000050141	protein_coding	Fam205c	ENSMUST00000107978	protein_coding	alternative2	4	-1	42874195	1451
ENSMUSG00000042770	protein_coding	Hebp1	ENSMUST00000045855	protein_coding	principal1	6	-1	135168215	1058
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000196378	protein_coding		5	-1	44004919	1089
ENSMUSG00000021286	protein_coding	Zfyve21	ENSMUST00000222843	protein_coding		12	1	111814213	705
ENSMUSG00000027304	protein_coding	Rtf1	ENSMUST00000028767	protein_coding	principal1	2	1	119675068	4664
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000165909	protein_coding	alternative2	5	-1	44099225	4089
ENSMUSG00000022657	protein_coding	Cd96	ENSMUST00000023336	protein_coding	principal1	16	-1	46120251	2184
ENSMUSG00000050141	protein_coding	Fam205c	ENSMUST00000134400	processed_transcript		4	-1	42873721	848
ENSMUSG00000042770	protein_coding	Hebp1	ENSMUST00000204000	processed_transcript		6	-1	135168192	379
ENSMUSG00000050141	protein_coding	Fam205c	ENSMUST00000144112	processed_transcript		4	-1	42874234	644
ENSMUSG00000027304	protein_coding	Rtf1	ENSMUST00000136321	processed_transcript		2	1	119675072	433
ENSMUSG00000042770	protein_coding	Hebp1	ENSMUST00000204730	processed_transcript		6	-1	135198022	215
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000115474	protein_coding	alternative2	6	1	15185506	2544
ENSMUSG00000042770	protein_coding	Hebp1	ENSMUST00000205232	retained_intron		6	-1	135168135	2618
ENSMUSG00000021286	protein_coding	Zfyve21	ENSMUST00000221375	protein_coding	alternative2	12	1	111814235	1265
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000087441	protein_coding	principal3	5	-1	44101681	3664
ENSMUSG00000027304	protein_coding	Rtf1	ENSMUST00000149904	retained_intron		2	1	119710996	538
ENSMUSG00000102943	processed_pseudogene	Gm37550	ENSMUST00000193230	processed_pseudogene		3	-1	49780887	463
ENSMUSG00000109436	lincRNA	Gm45075	ENSMUST00000208426	lincRNA		8	1	8612264	649
ENSMUSG00000030116	protein_coding	Mfap5	ENSMUST00000148517	protein_coding	principal2	6	1	122513583	1506
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000115472	protein_coding	alternative2	6	1	15185506	2687
ENSMUSG00000027304	protein_coding	Rtf1	ENSMUST00000126984	retained_intron		2	1	119726684	881
ENSMUSG00000112402	TEC	Gm10744	ENSMUST00000220184	TEC		10	-1	118883654	2706
ENSMUSG00000021286	protein_coding	Zfyve21	ENSMUST00000221488	retained_intron		12	1	111814241	742
ENSMUSG00000030116	protein_coding	Mfap5	ENSMUST00000118626	protein_coding	alternative2	6	1	122513659	748
ENSMUSG00000018570	protein_coding	2810408A11Rik	ENSMUST00000102580	protein_coding	principal3	11	-1	69900957	1640
ENSMUSG00000021286	protein_coding	Zfyve21	ENSMUST00000220616	protein_coding		12	1	111816256	366
ENSMUSG00000023861	protein_coding	Mpc1	ENSMUST00000145402	protein_coding		17	1	8282904	373
ENSMUSG00000030116	protein_coding	Mfap5	ENSMUST00000142896	protein_coding		6	1	122513676	425
ENSMUSG00000028901	protein_coding	Gmeb1	ENSMUST00000105965	protein_coding	principal1	4	-1	132261521	4632
ENSMUSG00000021286	protein_coding	Zfyve21	ENSMUST00000221313	retained_intron		12	1	111824765	541
ENSMUSG00000030116	protein_coding	Mfap5	ENSMUST00000121656	protein_coding		6	1	122513676	579
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000031545	protein_coding	principal3	6	1	15185506	5647
ENSMUSG00000028901	protein_coding	Gmeb1	ENSMUST00000030733	protein_coding	principal1	4	-1	132251852	2485
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000171543	protein_coding	alternative2	5	-1	44102032	3681
ENSMUSG00000030116	protein_coding	Mfap5	ENSMUST00000126357	retained_intron		6	1	122522499	2491
ENSMUSG00000028901	protein_coding	Gmeb1	ENSMUST00000105964	protein_coding	principal1	4	-1	132261602	1925
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000137628	protein_coding		6	1	15185563	778
ENSMUSG00000028901	protein_coding	Gmeb1	ENSMUST00000131763	retained_intron		4	-1	132234906	786
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000197750	protein_coding	alternative2	5	-1	44099192	3410
ENSMUSG00000022247	protein_coding	Brix1	ENSMUST00000022855	protein_coding	principal1	15	-1	10485947	2664
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000151301	retained_intron		6	1	15196949	2103
ENSMUSG00000028901	protein_coding	Gmeb1	ENSMUST00000125534	retained_intron		4	-1	132246068	730
ENSMUSG00000037944	protein_coding	Ccr7	ENSMUST00000103134	protein_coding	principal1	11	-1	99155077	1978
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000140557	protein_coding		6	1	15196951	792
ENSMUSG00000028901	protein_coding	Gmeb1	ENSMUST00000126542	processed_transcript		4	-1	132254252	357
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000131414	protein_coding		6	1	15196951	1381
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000115469	protein_coding		6	1	15196964	1293
ENSMUSG00000028901	protein_coding	Gmeb1	ENSMUST00000168553	protein_coding	principal1	4	-1	132252494	6523
ENSMUSG00000098162	processed_pseudogene	Gm26976	ENSMUST00000182929	processed_pseudogene		10	1	118892911	908
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000159788	processed_transcript		6	1	15254283	265
ENSMUSG00000084105	processed_pseudogene	Gm13252	ENSMUST00000119355	processed_pseudogene		4	-1	132245266	321
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000203227	retained_intron		6	1	15324288	1178
ENSMUSG00000022247	protein_coding	Brix1	ENSMUST00000168690	processed_transcript		15	-1	10485385	441
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000152563	processed_transcript		6	1	15376689	407
ENSMUSG00000018570	protein_coding	2810408A11Rik	ENSMUST00000144431	nonsense_mediated_decay		11	-1	69900975	2223
ENSMUSG00000021123	protein_coding	Rdh12	ENSMUST00000021548	protein_coding	principal1	12	1	79208914	1678
ENSMUSG00000020395	protein_coding	Itk	ENSMUST00000020664	protein_coding	principal1	11	-1	46389515	4272
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000115475	nonsense_mediated_decay		6	1	15376689	2762
ENSMUSG00000022247	protein_coding	Brix1	ENSMUST00000169050	protein_coding		15	-1	10485909	479
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000172282	protein_coding	principal4	10	1	79854427	3110
ENSMUSG00000021123	protein_coding	Rdh12	ENSMUST00000122227	protein_coding		12	1	79208931	1624
ENSMUSG00000022247	protein_coding	Brix1	ENSMUST00000168761	nonsense_mediated_decay		15	-1	10485887	443
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000197706	protein_coding	alternative2	5	-1	44094713	2583
ENSMUSG00000018570	protein_coding	2810408A11Rik	ENSMUST00000129234	nonsense_mediated_decay		11	-1	69900957	2009
ENSMUSG00000085152	lincRNA	Gm11496	ENSMUST00000128078	lincRNA		11	-1	88996544	581
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000030973	protein_coding	alternative2	5	-1	44094713	2598
ENSMUSG00000020395	protein_coding	Itk	ENSMUST00000101306	protein_coding		11	-1	46389457	1185
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000102894	protein_coding	principal1	10	1	51480632	1836
ENSMUSG00000029563	protein_coding	Foxp2	ENSMUST00000115477	protein_coding	principal3	6	1	14901349	6760
ENSMUSG00000018570	protein_coding	2810408A11Rik	ENSMUST00000137122	retained_intron		11	-1	69900987	1532
ENSMUSG00000002733	protein_coding	Plekha3	ENSMUST00000111920	protein_coding	principal1	2	1	76675281	2534
ENSMUSG00000021123	protein_coding	Rdh12	ENSMUST00000151980	retained_intron		12	1	79208947	2753
ENSMUSG00000020395	protein_coding	Itk	ENSMUST00000155991	retained_intron		11	-1	46389461	1199
ENSMUSG00000102562	TEC	Gm37694	ENSMUST00000191696	TEC		16	1	77685277	2133
ENSMUSG00000018570	protein_coding	2810408A11Rik	ENSMUST00000142121	retained_intron		11	-1	69899647	672
ENSMUSG00000021123	protein_coding	Rdh12	ENSMUST00000140823	protein_coding		12	1	79210661	558
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000219661	protein_coding		10	1	51480658	1143
ENSMUSG00000103049	TEC	Gm37311	ENSMUST00000195541	TEC		16	1	77616311	2024
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000196853	retained_intron		5	-1	44033020	880
ENSMUSG00000002733	protein_coding	Plekha3	ENSMUST00000125119	processed_transcript		2	1	76689853	752
ENSMUSG00000018570	protein_coding	2810408A11Rik	ENSMUST00000128046	protein_coding		11	-1	69900939	405
ENSMUSG00000021148	protein_coding	Gm9745	ENSMUST00000187196	protein_coding	principal1	13	-1	8948231	858
ENSMUSG00000103932	TEC	Gm36963	ENSMUST00000193506	TEC		16	1	77539882	2324
ENSMUSG00000023861	protein_coding	Mpc1	ENSMUST00000155364	protein_coding	principal1	17	1	8283762	958
ENSMUSG00000021148	protein_coding	Gm9745	ENSMUST00000021573	protein_coding	principal1	13	-1	8944300	684
ENSMUSG00000106683	lincRNA	Gm43263	ENSMUST00000201619	lincRNA		8	-1	69474842	560
ENSMUSG00000102854	TEC	C130023A14Rik	ENSMUST00000193537	TEC		16	1	77646340	3087
ENSMUSG00000030647	protein_coding	Ndufc2	ENSMUST00000032882	protein_coding	principal1	7	1	97400003	683
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000198347	nonsense_mediated_decay		5	-1	44045573	725
ENSMUSG00000099817	unprocessed_pseudogene	Gm29317	ENSMUST00000188216	unprocessed_pseudogene		Y	-1	30097895	696
ENSMUSG00000102267	TEC	9530003O04Rik	ENSMUST00000192663	TEC		16	1	77654531	908
ENSMUSG00000023861	protein_coding	Mpc1	ENSMUST00000147427	retained_intron		17	1	8283796	383
ENSMUSG00000055045	lincRNA	Gm11190	ENSMUST00000132487	lincRNA		11	-1	77929288	3414
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000159840	protein_coding	alternative1	4	-1	152448840	3574
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000197749	retained_intron		5	-1	44044647	778
ENSMUSG00000103972	TEC	Gm37466	ENSMUST00000195692	TEC		16	1	77381950	652
ENSMUSG00000099880	lincRNA	Gm29316	ENSMUST00000190953	lincRNA		Y	1	30132603	174
ENSMUSG00000030647	protein_coding	Ndufc2	ENSMUST00000149122	protein_coding		7	1	97400103	470
ENSMUSG00000020395	protein_coding	Itk	ENSMUST00000109237	protein_coding		11	-1	46389493	4268
ENSMUSG00000023861	protein_coding	Mpc1	ENSMUST00000124023	protein_coding		17	1	8283852	555
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000199739	retained_intron		5	-1	44037665	994
ENSMUSG00000106824	protein_coding	Gm7697	ENSMUST00000201500	protein_coding	principal1	8	-1	69522976	2507
ENSMUSG00000103851	TEC	Gm37606	ENSMUST00000191816	TEC		16	1	77561650	3116
ENSMUSG00000083974	processed_pseudogene	Gm16053	ENSMUST00000120511	processed_pseudogene		7	1	97406140	188
ENSMUSG00000023861	protein_coding	Mpc1	ENSMUST00000142594	protein_coding		17	1	8284454	961
ENSMUSG00000102205	TEC	9430092D12Rik	ENSMUST00000194937	TEC		16	1	77413643	1274
ENSMUSG00000103944	processed_pseudogene	Rpl26-ps3	ENSMUST00000195115	processed_pseudogene		12	1	113825226	435
ENSMUSG00000006386	protein_coding	Tek	ENSMUST00000073939	protein_coding		4	1	94739289	4549
ENSMUSG00000041444	protein_coding	Arhgap32	ENSMUST00000174641	protein_coding	principal1	9	1	32116136	13568
ENSMUSG00000023861	protein_coding	Mpc1	ENSMUST00000137344	retained_intron		17	1	8296108	670
ENSMUSG00000103916	TEC	Gm38071	ENSMUST00000195792	TEC		16	1	77416624	3378
ENSMUSG00000096330	protein_coding	Gm21976	ENSMUST00000180066	protein_coding	principal1	13	1	98279887	831
ENSMUSG00000041444	protein_coding	Arhgap32	ENSMUST00000182310	protein_coding		9	1	32129570	540
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000196852	retained_intron		5	-1	44101958	1518
ENSMUSG00000035505	protein_coding	Cox18	ENSMUST00000118816	protein_coding	alternative2	5	-1	90223972	1307
ENSMUSG00000023861	protein_coding	Mpc1	ENSMUST00000130559	protein_coding		17	1	8296370	603
ENSMUSG00000096870	TEC	Gm21816	ENSMUST00000193546	TEC		16	1	77400030	3106
ENSMUSG00000096330	protein_coding	Gm21976	ENSMUST00000180188	nonsense_mediated_decay		13	1	98279887	745
ENSMUSG00000025227	protein_coding	Mfsd13a	ENSMUST00000128041	protein_coding	principal1	19	1	46341121	2223
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000195942	processed_transcript		5	-1	44067685	724
ENSMUSG00000094134	IG_V_gene	Ighv5-15	ENSMUST00000192877	IG_V_gene	principal5	12	-1	113827129	361
ENSMUSG00000096870	TEC	Gm21816	ENSMUST00000179255	pseudogene		16	1	77400847	360
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000196178	protein_coding		5	-1	44099186	595
ENSMUSG00000094134	IG_V_gene	Ighv5-15	ENSMUST00000103457	IG_V_gene	alternative2	12	-1	113827121	350
ENSMUSG00000041444	protein_coding	Arhgap32	ENSMUST00000174314	retained_intron		9	1	32181911	543
ENSMUSG00000096330	protein_coding	Gm21976	ENSMUST00000178658	processed_transcript		13	1	98279892	764
ENSMUSG00000025227	protein_coding	Mfsd13a	ENSMUST00000086969	protein_coding	principal1	19	1	46356880	2278
ENSMUSG00000096330	protein_coding	Gm21976	ENSMUST00000186911	protein_coding		13	1	98302504	528
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000198218	processed_transcript		5	-1	44101958	650
ENSMUSG00000023861	protein_coding	Mpc1	ENSMUST00000046754	protein_coding	principal1	17	1	8283796	920
ENSMUSG00000007987	protein_coding	Ift22	ENSMUST00000200157	protein_coding	principal1	5	1	136908150	3071
ENSMUSG00000035505	protein_coding	Cox18	ENSMUST00000048363	protein_coding	principal3	5	-1	90224001	1333
ENSMUSG00000025227	protein_coding	Mfsd13a	ENSMUST00000142994	nonsense_mediated_decay		19	1	46356935	2051
ENSMUSG00000007987	protein_coding	Ift22	ENSMUST00000199101	protein_coding		5	1	136908198	501
ENSMUSG00000087478	processed_transcript	4930506C21Rik	ENSMUST00000130639	antisense		17	-1	8311052	909
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000179059	protein_coding	alternative2	5	-1	44094768	3579
ENSMUSG00000025227	protein_coding	Mfsd13a	ENSMUST00000128455	processed_transcript		19	1	46356939	399
ENSMUSG00000087478	processed_transcript	4930506C21Rik	ENSMUST00000123009	processed_transcript		17	-1	8298416	440
ENSMUSG00000007987	protein_coding	Ift22	ENSMUST00000200153	protein_coding		5	1	136908202	670
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000177946	protein_coding	alternative2	5	-1	44094768	3534
ENSMUSG00000087478	processed_transcript	4930506C21Rik	ENSMUST00000123341	retained_intron		17	-1	8311080	1193
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000168988	retained_intron		10	1	79854605	950
ENSMUSG00000029086	protein_coding	Prom1	ENSMUST00000087442	protein_coding	alternative2	5	-1	44094768	2728
ENSMUSG00000041444	protein_coding	Arhgap32	ENSMUST00000182802	protein_coding		9	1	32207448	5621
ENSMUSG00000007987	protein_coding	Ift22	ENSMUST00000008131	protein_coding		5	1	136908243	637
ENSMUSG00000025227	protein_coding	Mfsd13a	ENSMUST00000137143	processed_transcript		19	1	46366734	2234
ENSMUSG00000006386	protein_coding	Tek	ENSMUST00000102798	protein_coding	principal3	4	1	94739300	4654
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000183333	retained_intron		16	1	77236317	3422
ENSMUSG00000007987	protein_coding	Ift22	ENSMUST00000200054	retained_intron		5	1	136910886	473
ENSMUSG00000099655	protein_coding	2310034G01Rik	ENSMUST00000189008	protein_coding	principal1	19	-1	46350302	1373
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000219960	nonsense_mediated_decay		10	1	51480669	1804
ENSMUSG00000035505	protein_coding	Cox18	ENSMUST00000133905	processed_transcript		5	-1	90215581	595
ENSMUSG00000105264	processed_transcript	Gm42716	ENSMUST00000196003	sense_intronic		5	-1	44089589	680
ENSMUSG00000106284	processed_pseudogene	Gm43139	ENSMUST00000199914	processed_pseudogene		5	-1	69931808	284
ENSMUSG00000041444	protein_coding	Arhgap32	ENSMUST00000168954	protein_coding		9	1	32224249	8703
ENSMUSG00000105264	processed_transcript	Gm42716	ENSMUST00000197140	sense_intronic		5	-1	44089533	259
ENSMUSG00000035505	protein_coding	Cox18	ENSMUST00000144898	retained_intron		5	-1	90217879	812
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000218179	retained_intron		10	1	51480673	1589
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000160884	protein_coding	principal3	4	-1	152477910	3961
ENSMUSG00000035505	protein_coding	Cox18	ENSMUST00000200475	retained_intron		5	-1	90216022	1293
ENSMUSG00000105264	processed_transcript	Gm42716	ENSMUST00000196555	retained_intron		5	-1	44090854	1770
ENSMUSG00000112854	lincRNA	Gm38403	ENSMUST00000219032	lincRNA		10	-1	118927143	2357
ENSMUSG00000106613	processed_pseudogene	Gm42652	ENSMUST00000199073	processed_pseudogene		5	-1	70554221	614
ENSMUSG00000041444	protein_coding	Arhgap32	ENSMUST00000183121	protein_coding		9	1	32224592	380
ENSMUSG00000006386	protein_coding	Tek	ENSMUST00000071168	protein_coding	alternative1	4	1	94739518	4176
ENSMUSG00000027356	protein_coding	Fermt1	ENSMUST00000038280	protein_coding	principal1	2	-1	132945906	4915
ENSMUSG00000072962	antisense	Gm16401	ENSMUST00000197463	antisense		5	1	44100442	2074
ENSMUSG00000035505	protein_coding	Cox18	ENSMUST00000131068	retained_intron		5	-1	90219791	645
ENSMUSG00000112540	lincRNA	Gm47461	ENSMUST00000217840	lincRNA		10	-1	119021670	1813
ENSMUSG00000106549	TEC	Gm42653	ENSMUST00000200644	TEC		5	1	70561265	2839
ENSMUSG00000072962	antisense	Gm16401	ENSMUST00000072800	antisense		5	1	44100442	2072
ENSMUSG00000004371	protein_coding	Il11	ENSMUST00000094892	protein_coding	principal1	7	-1	4778141	1949
ENSMUSG00000041444	protein_coding	Arhgap32	ENSMUST00000174730	retained_intron		9	1	32245164	3638
ENSMUSG00000006386	protein_coding	Tek	ENSMUST00000131958	processed_transcript		4	1	94804843	361
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000030768	protein_coding	alternative1	4	-1	152477589	3597
ENSMUSG00000106625	TEC	Gm43344	ENSMUST00000198723	TEC		3	1	27546641	1229
ENSMUSG00000112778	lincRNA	Gm33677	ENSMUST00000220074	lincRNA		10	-1	119050499	2765
ENSMUSG00000086436	processed_pseudogene	Gm13690	ENSMUST00000118989	processed_pseudogene		2	-1	80629568	285
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000238738	protein_coding	alternative1	4	-1	152477439	3533
ENSMUSG00000097679	processed_pseudogene	Rps19-ps5	ENSMUST00000180745	processed_pseudogene		15	1	37868086	403
ENSMUSG00000030124	protein_coding	Lag3	ENSMUST00000032217	protein_coding	principal1	6	-1	124911705	2001
ENSMUSG00000004371	protein_coding	Il11	ENSMUST00000163481	protein_coding		7	-1	4782857	990
ENSMUSG00000112683	processed_pseudogene	Gm18904	ENSMUST00000218756	processed_pseudogene		10	1	119090342	329
ENSMUSG00000004371	protein_coding	Il11	ENSMUST00000234277	protein_coding		7	-1	4782859	1059
ENSMUSG00000035505	protein_coding	Cox18	ENSMUST00000148480	nonsense_mediated_decay		5	-1	90223939	695
ENSMUSG00000027356	protein_coding	Fermt1	ENSMUST00000134937	retained_intron		2	-1	132945629	5236
ENSMUSG00000030124	protein_coding	Lag3	ENSMUST00000139571	processed_transcript		6	-1	124910051	426
ENSMUSG00000041241	protein_coding	Mul1	ENSMUST00000044058	protein_coding	principal1	4	1	138434671	3733
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000238715	protein_coding		4	-1	152430869	3803
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000238252	protein_coding		4	-1	152418407	2674
ENSMUSG00000027356	protein_coding	Fermt1	ENSMUST00000144342	processed_transcript		2	-1	132942097	317
ENSMUSG00000048087	protein_coding	Gm4737	ENSMUST00000059524	protein_coding	principal1	16	-1	46155077	2093
ENSMUSG00000027356	protein_coding	Fermt1	ENSMUST00000143981	processed_transcript		2	-1	132941963	447
ENSMUSG00000101642	lincRNA	Gm29315	ENSMUST00000185844	lincRNA		Y	1	30155238	622
ENSMUSG00000118462	protein_coding	AC151602.1	ENSMUST00000238591	nonsense_mediated_decay		7	1	45418353	2278
ENSMUSG00000101642	lincRNA	Gm29315	ENSMUST00000190162	lincRNA		Y	1	30155238	437
ENSMUSG00000085107	processed_pseudogene	Gm4764	ENSMUST00000130207	processed_pseudogene		X	1	35801197	1233
ENSMUSG00000118462	protein_coding	AC151602.1	ENSMUST00000238581	retained_intron		7	1	45418353	2501
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000105648	protein_coding	principal3	4	-1	152448856	1799
ENSMUSG00000118462	protein_coding	AC151602.1	ENSMUST00000238638	protein_coding	principal1	7	1	45418370	933
ENSMUSG00000019818	protein_coding	Cd164	ENSMUST00000019962	protein_coding	principal1	10	1	41519414	2922
ENSMUSG00000020458	protein_coding	Rtn4	ENSMUST00000102843	protein_coding		11	1	29692947	4618
ENSMUSG00000118462	protein_coding	AC151602.1	ENSMUST00000238437	nonsense_mediated_decay		7	1	45418372	778
ENSMUSG00000041241	protein_coding	Mul1	ENSMUST00000105813	protein_coding		4	1	138434677	3944
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000219178	retained_intron		10	1	51480676	3966
ENSMUSG00000097851	lincRNA	Platr30	ENSMUST00000199348	lincRNA		3	1	96345287	1934
ENSMUSG00000035967	protein_coding	Ints6l	ENSMUST00000039374	protein_coding	principal1	X	1	56454877	3766
ENSMUSG00000020458	protein_coding	Rtn4	ENSMUST00000102842	protein_coding		11	1	29692947	2257
ENSMUSG00000097851	lincRNA	Platr30	ENSMUST00000180637	lincRNA		3	1	96349927	1436
ENSMUSG00000019818	protein_coding	Cd164	ENSMUST00000187279	retained_intron		10	1	41519501	1528
ENSMUSG00000041241	protein_coding	Mul1	ENSMUST00000105815	protein_coding		4	1	138434723	473
ENSMUSG00000019818	protein_coding	Cd164	ENSMUST00000189300	protein_coding		10	1	41519892	692
ENSMUSG00000035967	protein_coding	Ints6l	ENSMUST00000101553	protein_coding		X	1	56454880	3201
ENSMUSG00000097807	lincRNA	Gm26553	ENSMUST00000181531	lincRNA		3	-1	96357094	1818
ENSMUSG00000026999	protein_coding	Nup35	ENSMUST00000135305	retained_intron		2	1	80617236	2688
ENSMUSG00000019818	protein_coding	Cd164	ENSMUST00000186388	nonsense_mediated_decay		10	1	41520044	592
ENSMUSG00000013091	protein_coding	Tmem190	ENSMUST00000013235	protein_coding	principal1	7	1	4782937	589
ENSMUSG00000082799	unprocessed_pseudogene	Gm14554	ENSMUST00000119548	unprocessed_pseudogene		X	1	35804769	661
ENSMUSG00000035967	protein_coding	Ints6l	ENSMUST00000132428	nonsense_mediated_decay		X	1	56454885	3611
ENSMUSG00000082704	processed_pseudogene	Gm12515	ENSMUST00000120116	processed_pseudogene		4	1	55116563	361
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000218649	retained_intron		10	1	51480676	2480
ENSMUSG00000097539	lincRNA	4930477E14Rik	ENSMUST00000181412	lincRNA		3	-1	96402014	621
ENSMUSG00000013091	protein_coding	Tmem190	ENSMUST00000206395	retained_intron		7	1	4782951	408
ENSMUSG00000081504	processed_pseudogene	Gm12508	ENSMUST00000121282	processed_pseudogene		4	1	55254740	480
ENSMUSG00000020458	protein_coding	Rtn4	ENSMUST00000078830	protein_coding		11	1	29692947	3615
ENSMUSG00000103006	TEC	4933417C20Rik	ENSMUST00000193962	TEC		1	1	160212943	1874
ENSMUSG00000057278	protein_coding	Snrpg	ENSMUST00000089558	protein_coding	principal1	6	1	86371304	1055
ENSMUSG00000081177	processed_pseudogene	Gm12509	ENSMUST00000118033	processed_pseudogene		4	1	55163008	609
ENSMUSG00000097908	lincRNA	4933404O12Rik	ENSMUST00000181045	lincRNA		5	1	136919146	3967
ENSMUSG00000035967	protein_coding	Ints6l	ENSMUST00000143142	protein_coding		X	1	56483818	2766
ENSMUSG00000101719	lincRNA	Gm28216	ENSMUST00000188785	lincRNA		Y	1	30195252	174
ENSMUSG00000097908	lincRNA	4933404O12Rik	ENSMUST00000199264	lincRNA		5	1	136919181	803
ENSMUSG00000041219	protein_coding	Arhgap11a	ENSMUST00000102545	protein_coding	principal2	2	-1	113848656	4958
ENSMUSG00000097299	lincRNA	Gm26654	ENSMUST00000180455	lincRNA		3	1	96402381	256
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000159186	protein_coding		4	-1	152430666	1325
ENSMUSG00000087614	lincRNA	Gm12514	ENSMUST00000150455	lincRNA		4	-1	55279479	699
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000219151	retained_intron		10	1	51480677	3008
ENSMUSG00000035967	protein_coding	Ints6l	ENSMUST00000142624	protein_coding		X	1	56505067	719
ENSMUSG00000020458	protein_coding	Rtn4	ENSMUST00000102841	protein_coding		11	1	29693774	4060
ENSMUSG00000097041	processed_pseudogene	Pafah1b1-ps1	ENSMUST00000181263	processed_pseudogene		3	-1	96409059	1046
ENSMUSG00000087614	lincRNA	Gm12514	ENSMUST00000142782	lincRNA		4	-1	55135501	568
ENSMUSG00000097908	lincRNA	4933404O12Rik	ENSMUST00000197095	lincRNA		5	1	136919352	617
ENSMUSG00000035967	protein_coding	Ints6l	ENSMUST00000186445	protein_coding	principal1	X	1	56454885	3608
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000219262	processed_transcript		10	1	51480678	1215
ENSMUSG00000030206	protein_coding	Gsg1	ENSMUST00000087729	protein_coding	principal4	6	-1	135247965	1307
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000218704	nonsense_mediated_decay		10	1	51480684	1022
ENSMUSG00000041219	protein_coding	Arhgap11a	ENSMUST00000110948	protein_coding	alternative2	2	-1	113848661	4878
ENSMUSG00000097908	lincRNA	4933404O12Rik	ENSMUST00000181190	lincRNA		5	1	136919401	4058
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000159844	processed_transcript		4	-1	152422744	1004
ENSMUSG00000078619	protein_coding	Smarcd2	ENSMUST00000106843	protein_coding		11	-1	106267799	2548
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000219053	retained_intron		10	1	51480686	4004
ENSMUSG00000041219	protein_coding	Arhgap11a	ENSMUST00000110947	protein_coding	alternative2	2	-1	113848297	3199
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000161236	protein_coding		4	-1	152455043	668
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000161496	protein_coding		4	-1	152430659	484
ENSMUSG00000115326	lincRNA	Gm35019	ENSMUST00000226812	lincRNA		15	-1	37899716	2265
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000219717	retained_intron		10	1	51480700	1602
ENSMUSG00000057278	protein_coding	Snrpg	ENSMUST00000203782	retained_intron		6	1	86371542	357
ENSMUSG00000028514	protein_coding	Usp24	ENSMUST00000094933	protein_coding	principal2	4	1	106316234	10575
ENSMUSG00000041219	protein_coding	Arhgap11a	ENSMUST00000110949	protein_coding	principal2	2	-1	113848615	4458
ENSMUSG00000020458	protein_coding	Rtn4	ENSMUST00000060992	protein_coding	principal1	11	1	29718563	1773
ENSMUSG00000001128	protein_coding	Cfp	ENSMUST00000001156	protein_coding	principal1	X	-1	20931555	1636
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000218900	retained_intron		10	1	51480707	3767
ENSMUSG00000030206	protein_coding	Gsg1	ENSMUST00000111909	protein_coding	alternative2	6	-1	135254170	1087
ENSMUSG00000112023	protein_coding	Lilr4b	ENSMUST00000219598	retained_intron		10	1	51485569	520
ENSMUSG00000028514	protein_coding	Usp24	ENSMUST00000150521	processed_transcript		4	1	106428493	389
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000165704	protein_coding	alternative2	10	1	79854629	3169
ENSMUSG00000028514	protein_coding	Usp24	ENSMUST00000165709	protein_coding	alternative2	4	1	106316213	10594
ENSMUSG00000001128	protein_coding	Cfp	ENSMUST00000122862	processed_transcript		X	-1	20927614	401
ENSMUSG00000057278	protein_coding	Snrpg	ENSMUST00000204380	processed_transcript		6	1	86371571	746
ENSMUSG00000020458	protein_coding	Rtn4	ENSMUST00000156217	processed_transcript		11	1	29733698	790
ENSMUSG00000078619	protein_coding	Smarcd2	ENSMUST00000021052	protein_coding	principal1	11	-1	106272972	2747
ENSMUSG00000030206	protein_coding	Gsg1	ENSMUST00000111911	protein_coding	alternative2	6	-1	135254326	1426
ENSMUSG00000020458	protein_coding	Rtn4	ENSMUST00000141719	processed_transcript		11	1	29733773	697
ENSMUSG00000057278	protein_coding	Snrpg	ENSMUST00000204768	processed_transcript		6	1	86371604	375
ENSMUSG00000020458	protein_coding	Rtn4	ENSMUST00000125735	processed_transcript		11	1	29736400	566
ENSMUSG00000093989	protein_coding	Rnasek	ENSMUST00000125752	nonsense_mediated_decay		11	-1	70239780	779
ENSMUSG00000090100	protein_coding	Ttbk2	ENSMUST00000057135	protein_coding	principal1	2	-1	120850406	11066
ENSMUSG00000020458	protein_coding	Rtn4	ENSMUST00000126162	processed_transcript		11	1	29740998	907
ENSMUSG00000107509	antisense	Gm44941	ENSMUST00000204216	antisense		6	-1	86375285	627
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000159435	protein_coding		4	-1	152448741	365
ENSMUSG00000107872	protein_coding	Gm44511	ENSMUST00000204394	protein_coding	principal5	6	-1	128826252	678
ENSMUSG00000107872	protein_coding	Gm44511	ENSMUST00000204423	protein_coding	alternative2	6	-1	128826252	678
ENSMUSG00000107872	protein_coding	Gm44511	ENSMUST00000204756	protein_coding		6	-1	128826219	566
ENSMUSG00000107872	protein_coding	Gm44511	ENSMUST00000204677	protein_coding		6	-1	128826315	500
ENSMUSG00000036951	protein_coding	Aadacl2fm1	ENSMUST00000049476	protein_coding	principal1	3	1	59925214	2789
ENSMUSG00000020458	protein_coding	Rtn4	ENSMUST00000170731	protein_coding		11	1	29692948	1272
ENSMUSG00000030206	protein_coding	Gsg1	ENSMUST00000111910	protein_coding	alternative2	6	-1	135254351	1384
ENSMUSG00000080851	processed_pseudogene	Gm12094	ENSMUST00000121781	processed_pseudogene		11	1	29840375	472
ENSMUSG00000080810	processed_pseudogene	Gm11737	ENSMUST00000118713	processed_pseudogene		11	-1	118205179	468
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000162165	processed_transcript		4	-1	152477519	638
ENSMUSG00000061079	protein_coding	Zfp143	ENSMUST00000209505	protein_coding	principal2	7	1	110061217	2693
ENSMUSG00000078619	protein_coding	Smarcd2	ENSMUST00000155514	retained_intron		11	-1	106265662	1250
ENSMUSG00000108248	processed_pseudogene	Gm34391	ENSMUST00000203706	processed_pseudogene		6	-1	135172105	907
ENSMUSG00000078619	protein_coding	Smarcd2	ENSMUST00000106841	retained_intron		11	-1	106264936	886
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000162200	retained_intron		4	-1	152477544	543
ENSMUSG00000078619	protein_coding	Smarcd2	ENSMUST00000140255	protein_coding		11	-1	106265746	884
ENSMUSG00000090100	protein_coding	Ttbk2	ENSMUST00000028740	protein_coding		2	-1	120850604	10926
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000161844	processed_transcript		4	-1	152421873	1332
ENSMUSG00000053977	protein_coding	Cd8a	ENSMUST00000066747	protein_coding	principal3	6	1	71373427	3128
ENSMUSG00000100351	processed_pseudogene	Gm7867	ENSMUST00000189856	processed_pseudogene		1	-1	93307239	546
ENSMUSG00000070465	transcribed_unprocessed_pseudogene	Gm9696	ENSMUST00000094227	processed_transcript		3	1	59952309	3050
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000159488	processed_transcript		4	-1	152421834	694
ENSMUSG00000061079	protein_coding	Zfp143	ENSMUST00000211798	protein_coding	principal2	7	1	110061710	2631
ENSMUSG00000070465	transcribed_unprocessed_pseudogene	Gm9696	ENSMUST00000191541	transcribed_unprocessed_pseudogene		3	1	59959360	830
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000162518	processed_transcript		4	-1	152448741	491
ENSMUSG00000093989	protein_coding	Rnasek	ENSMUST00000040428	protein_coding	principal1	11	-1	70239842	611
ENSMUSG00000101172	antisense	Gm28535	ENSMUST00000188069	antisense		1	1	93305964	885
ENSMUSG00000078619	protein_coding	Smarcd2	ENSMUST00000132278	retained_intron		11	-1	106266071	621
ENSMUSG00000028931	protein_coding	Kcnab2	ENSMUST00000162017	protein_coding		4	-1	152477495	406
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000165153	retained_intron		10	1	79854633	2369
ENSMUSG00000061079	protein_coding	Zfp143	ENSMUST00000084727	protein_coding	alternative1	7	1	110061710	3003
ENSMUSG00000053977	protein_coding	Cd8a	ENSMUST00000205054	retained_intron		6	1	71373548	1950
ENSMUSG00000078619	protein_coding	Smarcd2	ENSMUST00000155243	processed_transcript		11	-1	106272965	405
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000099958	processed_transcript		10	1	79854641	657
ENSMUSG00000090057	antisense	Gm16333	ENSMUST00000161416	antisense		4	1	152410800	318
ENSMUSG00000093989	protein_coding	Rnasek	ENSMUST00000141880	protein_coding		11	-1	70239058	465
ENSMUSG00000092483	processed_transcript	Gm20421	ENSMUST00000153344	processed_transcript		4	-1	154961678	672
ENSMUSG00000061079	protein_coding	Zfp143	ENSMUST00000169638	protein_coding		7	1	110061722	2914
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000057343	nonsense_mediated_decay		10	1	79854652	1765
ENSMUSG00000042249	protein_coding	Grk3	ENSMUST00000065167	protein_coding	principal1	5	-1	113015514	6533
ENSMUSG00000078619	protein_coding	Smarcd2	ENSMUST00000174253	processed_transcript		11	-1	106267483	608
ENSMUSG00000090100	protein_coding	Ttbk2	ENSMUST00000143051	protein_coding		2	-1	120850390	3093
ENSMUSG00000061079	protein_coding	Zfp143	ENSMUST00000209252	retained_intron		7	1	110091629	599
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000135390	protein_coding		11	-1	70236196	768
ENSMUSG00000078619	protein_coding	Smarcd2	ENSMUST00000174017	retained_intron		11	-1	106267528	485
ENSMUSG00000090100	protein_coding	Ttbk2	ENSMUST00000131389	protein_coding		2	-1	120850364	1684
ENSMUSG00000073867	TEC	AA474408	ENSMUST00000098110	TEC		7	-1	110061325	3339
ENSMUSG00000053977	protein_coding	Cd8a	ENSMUST00000172321	protein_coding	alternative2	6	1	71373553	2975
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000171599	protein_coding		10	1	79854665	389
ENSMUSG00000109904	TEC	Gm45819	ENSMUST00000210940	TEC		7	1	110119990	1751
ENSMUSG00000090100	protein_coding	Ttbk2	ENSMUST00000141921	processed_transcript		2	-1	120850435	850
ENSMUSG00000090100	protein_coding	Ttbk2	ENSMUST00000085840	protein_coding	principal1	2	-1	120850418	11152
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000168216	processed_transcript		10	1	79854667	369
ENSMUSG00000033033	protein_coding	Calhm2	ENSMUST00000035822	protein_coding	principal1	19	-1	47138294	2458
ENSMUSG00000047868	protein_coding	Olfr770	ENSMUST00000203887	protein_coding	principal1	10	-1	129138960	1658
ENSMUSG00000034484	protein_coding	Snx2	ENSMUST00000037850	protein_coding	principal1	18	1	53176316	2067
ENSMUSG00000048001	protein_coding	Hes5	ENSMUST00000049621	protein_coding	principal1	4	1	154960923	1273
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000169483	nonsense_mediated_decay		10	1	79854667	385
ENSMUSG00000101585	antisense	1600010M07Rik	ENSMUST00000191157	antisense		7	-1	110006646	617
ENSMUSG00000033033	protein_coding	Calhm2	ENSMUST00000140512	protein_coding		19	-1	47138294	3377
ENSMUSG00000047868	protein_coding	Olfr770	ENSMUST00000204250	protein_coding	principal1	10	-1	129138982	1644
ENSMUSG00000047868	protein_coding	Olfr770	ENSMUST00000204712	protein_coding	principal1	10	-1	129138998	1460
ENSMUSG00000042249	protein_coding	Grk3	ENSMUST00000200332	nonsense_mediated_decay		5	-1	113015514	4455
ENSMUSG00000048001	protein_coding	Hes5	ENSMUST00000151480	processed_transcript		4	1	154960971	350
ENSMUSG00000101585	antisense	1600010M07Rik	ENSMUST00000188662	antisense		7	-1	109999233	654
ENSMUSG00000042249	protein_coding	Grk3	ENSMUST00000199337	retained_intron		5	-1	112924375	781
ENSMUSG00000047868	protein_coding	Olfr770	ENSMUST00000062314	protein_coding	principal1	10	-1	129133766	936
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000095457	protein_coding	alternative2	10	1	79854668	2598
ENSMUSG00000101585	antisense	1600010M07Rik	ENSMUST00000185931	antisense		7	-1	110151202	1204
ENSMUSG00000042249	protein_coding	Grk3	ENSMUST00000197888	protein_coding		5	-1	113015791	1938
ENSMUSG00000034484	protein_coding	Snx2	ENSMUST00000236911	nonsense_mediated_decay		18	1	53176359	616
ENSMUSG00000101585	antisense	1600010M07Rik	ENSMUST00000188824	antisense		7	-1	110006631	320
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000165563	protein_coding	principal3	10	1	59702477	2442
ENSMUSG00000042249	protein_coding	Grk3	ENSMUST00000195928	retained_intron		5	-1	112925798	759
ENSMUSG00000061367	protein_coding	Olfr771	ENSMUST00000214271	protein_coding	principal1	10	-1	129164751	2098
ENSMUSG00000034484	protein_coding	Snx2	ENSMUST00000235943	retained_intron		18	1	53176368	735
ENSMUSG00000108600	lincRNA	Gm32884	ENSMUST00000205528	lincRNA		7	1	128795194	732
ENSMUSG00000023118	protein_coding	Sympk	ENSMUST00000023882	protein_coding	principal1	7	1	19024377	4116
ENSMUSG00000042249	protein_coding	Grk3	ENSMUST00000197776	protein_coding		5	-1	113015503	1570
ENSMUSG00000061367	protein_coding	Olfr771	ENSMUST00000078914	protein_coding	principal1	10	-1	129160982	954
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000168683	protein_coding		10	1	79855038	375
ENSMUSG00000034484	protein_coding	Snx2	ENSMUST00000237238	processed_transcript		18	1	53176389	661
ENSMUSG00000103177	processed_pseudogene	Gm18427	ENSMUST00000195422	processed_pseudogene		3	-1	60020869	515
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000169091	protein_coding		10	1	79858772	319
ENSMUSG00000034484	protein_coding	Snx2	ENSMUST00000236111	retained_intron		18	1	53209376	576
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000167872	retained_intron		10	1	59702563	4699
ENSMUSG00000026999	protein_coding	Nup35	ENSMUST00000028382	protein_coding	principal1	2	1	80638816	1559
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000171216	retained_intron		10	1	79858994	744
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000136092	processed_transcript		4	1	103114390	475
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000020311	protein_coding	alternative1	10	1	59702599	2336
ENSMUSG00000107662	protein_coding	Olfr772	ENSMUST00000214672	protein_coding	principal1	10	-1	129177921	2955
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000165724	nonsense_mediated_decay		10	1	79859650	848
ENSMUSG00000023118	protein_coding	Sympk	ENSMUST00000153976	protein_coding		7	1	19024420	827
ENSMUSG00000026999	protein_coding	Nup35	ENSMUST00000124377	protein_coding		2	1	80638832	653
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000092508	protein_coding	alternative1	10	1	59702628	2294
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000164385	retained_intron		10	1	79861738	693
ENSMUSG00000031016	protein_coding	Wee1	ENSMUST00000033326	protein_coding	principal1	7	1	110122046	3419
ENSMUSG00000026999	protein_coding	Nup35	ENSMUST00000144697	processed_transcript		2	1	80639264	496
ENSMUSG00000006498	protein_coding	Ptbp1	ENSMUST00000169580	retained_intron		10	1	79862017	2108
ENSMUSG00000107662	protein_coding	Olfr772	ENSMUST00000169800	protein_coding	principal1	10	-1	129175054	1004
ENSMUSG00000023118	protein_coding	Sympk	ENSMUST00000137287	retained_intron		7	1	19024423	4760
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000171409	protein_coding		10	1	59702649	806
ENSMUSG00000026999	protein_coding	Nup35	ENSMUST00000127926	processed_transcript		2	1	80644204	692
ENSMUSG00000111531	lincRNA	Gm32688	ENSMUST00000213849	lincRNA		10	1	93317403	585
ENSMUSG00000007041	protein_coding	Clic1	ENSMUST00000007257	protein_coding	principal1	17	1	35049966	1466
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000165405	retained_intron		10	1	59702658	1732
ENSMUSG00000090860	antisense	Gm17134	ENSMUST00000166593	antisense		10	-1	79864434	437
ENSMUSG00000091376	protein_coding	Aadacl2	ENSMUST00000169794	protein_coding	principal1	3	1	60006743	1590
ENSMUSG00000110647	lincRNA	Gm17745	ENSMUST00000212186	lincRNA		10	1	93335393	1692
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000170952	processed_transcript		10	1	59740084	311
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000167612	protein_coding		10	1	59740774	562
ENSMUSG00000059064	processed_pseudogene	Gm10059	ENSMUST00000131139	processed_pseudogene		5	1	33759366	171
ENSMUSG00000108540	processed_pseudogene	Gm4768	ENSMUST00000206199	processed_pseudogene		7	-1	128998021	686
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000217705	protein_coding		10	1	51490956	1142
ENSMUSG00000057729	protein_coding	Prtn3	ENSMUST00000163188	processed_transcript		10	1	79874476	843
ENSMUSG00000007041	protein_coding	Clic1	ENSMUST00000172599	retained_intron		17	1	35052450	843
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000172034	processed_transcript		10	1	59762413	600
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000169842	retained_intron		10	1	59827221	799
ENSMUSG00000108785	processed_pseudogene	Gm4259	ENSMUST00000206489	processed_pseudogene		7	-1	129055076	758
ENSMUSG00000040385	protein_coding	Ppp1ca	ENSMUST00000046094	protein_coding	principal1	19	1	4192065	1473
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000166565	retained_intron		10	1	59861518	360
ENSMUSG00000044712	protein_coding	Slc38a6	ENSMUST00000140523	protein_coding	principal1	12	1	73286779	3032
ENSMUSG00000023118	protein_coding	Sympk	ENSMUST00000146903	nonsense_mediated_decay		7	1	19024426	4781
ENSMUSG00000101674	antisense	4930444A19Rik	ENSMUST00000190007	antisense		1	1	54681729	633
ENSMUSG00000040385	protein_coding	Ppp1ca	ENSMUST00000237734	processed_transcript		19	1	4192159	436
ENSMUSG00000023118	protein_coding	Sympk	ENSMUST00000138440	processed_transcript		7	1	19045694	799
ENSMUSG00000101674	antisense	4930444A19Rik	ENSMUST00000188243	antisense		1	1	54690496	2117
ENSMUSG00000044712	protein_coding	Slc38a6	ENSMUST00000126488	protein_coding		12	1	73286790	589
ENSMUSG00000102642	TEC	A130048G24Rik	ENSMUST00000193052	TEC		1	-1	54916594	2750
ENSMUSG00000027465	protein_coding	Tbc1d20	ENSMUST00000028963	protein_coding	principal1	2	1	152293828	3386
ENSMUSG00000023118	protein_coding	Sympk	ENSMUST00000148861	processed_transcript		7	1	19052337	1099
ENSMUSG00000090459	antisense	Gm17210	ENSMUST00000169975	antisense		14	-1	32294974	391
ENSMUSG00000044712	protein_coding	Slc38a6	ENSMUST00000058139	nonsense_mediated_decay		12	1	73286857	2244
ENSMUSG00000020111	protein_coding	Micu1	ENSMUST00000179709	protein_coding	principal3	10	1	59702618	1814
ENSMUSG00000115833	processed_pseudogene	Gm49196	ENSMUST00000228947	processed_pseudogene		14	1	32230846	598
ENSMUSG00000040385	protein_coding	Ppp1ca	ENSMUST00000237096	retained_intron		19	1	4192173	938
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000189563	retained_intron		1	-1	54648613	3274
ENSMUSG00000023118	protein_coding	Sympk	ENSMUST00000130328	protein_coding		7	1	19052404	469
ENSMUSG00000027465	protein_coding	Tbc1d20	ENSMUST00000144252	protein_coding		2	1	152293851	365
ENSMUSG00000079298	protein_coding	Klrb1b	ENSMUST00000032472	protein_coding	principal2	6	-1	128826331	2228
ENSMUSG00000091570	processed_pseudogene	Gm7707	ENSMUST00000165950	processed_pseudogene		14	-1	32267748	1156
ENSMUSG00000020176	protein_coding	Grb10	ENSMUST00000109653	protein_coding		11	-1	11970642	2048
ENSMUSG00000040385	protein_coding	Ppp1ca	ENSMUST00000235739	retained_intron		19	1	4192204	808
ENSMUSG00000044712	protein_coding	Slc38a6	ENSMUST00000153941	protein_coding		12	1	73286895	3927
ENSMUSG00000057729	protein_coding	Prtn3	ENSMUST00000006679	protein_coding	principal1	10	1	79879614	1025
ENSMUSG00000023118	protein_coding	Sympk	ENSMUST00000131230	retained_intron		7	1	19052434	636
ENSMUSG00000044712	protein_coding	Slc38a6	ENSMUST00000122920	protein_coding		12	1	73286908	359
ENSMUSG00000079298	protein_coding	Klrb1b	ENSMUST00000172887	protein_coding		6	-1	128826313	1416
ENSMUSG00000027465	protein_coding	Tbc1d20	ENSMUST00000140482	retained_intron		2	1	152293872	3496
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000219388	retained_intron		10	1	51490963	2920
ENSMUSG00000027465	protein_coding	Tbc1d20	ENSMUST00000147591	protein_coding		2	1	152294180	893
ENSMUSG00000079298	protein_coding	Klrb1b	ENSMUST00000205130	protein_coding	alternative2	6	-1	128826290	917
ENSMUSG00000057729	protein_coding	Prtn3	ENSMUST00000165982	retained_intron		10	1	79880980	786
ENSMUSG00000044712	protein_coding	Slc38a6	ENSMUST00000101313	protein_coding		12	1	73287060	1546
ENSMUSG00000040385	protein_coding	Ppp1ca	ENSMUST00000236181	processed_transcript		19	1	4192433	1318
ENSMUSG00000079298	protein_coding	Klrb1b	ENSMUST00000174544	protein_coding		6	-1	128826305	350
ENSMUSG00000027465	protein_coding	Tbc1d20	ENSMUST00000141373	retained_intron		2	1	152308199	666
ENSMUSG00000057729	protein_coding	Prtn3	ENSMUST00000164134	retained_intron		10	1	79881004	629
ENSMUSG00000081686	processed_pseudogene	Gm11774	ENSMUST00000118601	processed_pseudogene		11	-1	121003784	293
ENSMUSG00000040385	protein_coding	Ppp1ca	ENSMUST00000236718	retained_intron		19	1	4193677	613
ENSMUSG00000057729	protein_coding	Prtn3	ENSMUST00000166201	protein_coding		10	1	79881042	423
ENSMUSG00000044712	protein_coding	Slc38a6	ENSMUST00000134247	retained_intron		12	1	73318629	725
ENSMUSG00000027001	protein_coding	Dusp19	ENSMUST00000028384	protein_coding	principal1	2	1	80617045	1632
ENSMUSG00000039286	protein_coding	Fndc3b	ENSMUST00000195008	protein_coding	principal1	3	-1	27710398	6886
ENSMUSG00000040385	protein_coding	Ppp1ca	ENSMUST00000236168	retained_intron		19	1	4193708	601
ENSMUSG00000057729	protein_coding	Prtn3	ENSMUST00000171489	retained_intron		10	1	79881783	446
ENSMUSG00000044712	protein_coding	Slc38a6	ENSMUST00000150996	retained_intron		12	1	73344367	767
ENSMUSG00000040385	protein_coding	Ppp1ca	ENSMUST00000236921	retained_intron		19	1	4194649	375
ENSMUSG00000039286	protein_coding	Fndc3b	ENSMUST00000046157	protein_coding	principal1	3	-1	27710439	6875
ENSMUSG00000117839	antisense	Gm50251	ENSMUST00000235517	antisense		19	-1	4192782	241
ENSMUSG00000005299	protein_coding	Letm1	ENSMUST00000005431	protein_coding	principal1	5	-1	33782817	5272
ENSMUSG00000086835	antisense	Gm11775	ENSMUST00000136500	antisense		11	1	121029402	773
ENSMUSG00000039286	protein_coding	Fndc3b	ENSMUST00000191684	retained_intron		3	-1	27711307	5631
ENSMUSG00000103828	TEC	2610001A08Rik	ENSMUST00000193315	TEC		11	-1	19006473	867
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000182656	lincRNA		16	1	77236317	2269
ENSMUSG00000039286	protein_coding	Fndc3b	ENSMUST00000193779	protein_coding		3	-1	27711239	505
ENSMUSG00000005299	protein_coding	Letm1	ENSMUST00000149886	retained_intron		5	-1	33753562	3056
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000182398	lincRNA		16	1	77236319	669
ENSMUSG00000005299	protein_coding	Letm1	ENSMUST00000200827	nonsense_mediated_decay		5	-1	33778644	642
ENSMUSG00000009406	protein_coding	Elk1	ENSMUST00000009550	protein_coding	principal1	X	-1	20950608	3548
ENSMUSG00000092397	antisense	C130080G10Rik	ENSMUST00000154140	antisense		2	1	114054335	1564
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000183099	lincRNA		16	1	77329180	1189
ENSMUSG00000005299	protein_coding	Letm1	ENSMUST00000201981	processed_transcript		5	-1	33782714	747
ENSMUSG00000009406	protein_coding	Elk1	ENSMUST00000148133	retained_intron		X	-1	20950608	2246
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000182548	lincRNA		16	1	77329188	644
ENSMUSG00000092397	antisense	C130080G10Rik	ENSMUST00000150005	antisense		2	1	114054396	1844
ENSMUSG00000027001	protein_coding	Dusp19	ENSMUST00000147290	processed_transcript		2	1	80617100	1324
ENSMUSG00000026275	protein_coding	Ppp1r7	ENSMUST00000027494	protein_coding	principal1	1	1	93342854	10315
ENSMUSG00000044072	protein_coding	Eml6	ENSMUST00000058902	protein_coding	principal1	11	-1	30026033	8083
ENSMUSG00000071573	polymorphic_pseudogene	Rnls	ENSMUST00000096114	polymorphic_pseudogene		19	-1	33392265	1597
ENSMUSG00000092397	antisense	C130080G10Rik	ENSMUST00000155678	antisense		2	1	114055247	503
ENSMUSG00000005299	protein_coding	Letm1	ENSMUST00000144071	processed_transcript		5	-1	33770454	488
ENSMUSG00000027001	protein_coding	Dusp19	ENSMUST00000148084	processed_transcript		2	1	80617226	512
ENSMUSG00000092397	antisense	C130080G10Rik	ENSMUST00000134456	antisense		2	1	114056288	761
ENSMUSG00000026275	protein_coding	Ppp1r7	ENSMUST00000185498	protein_coding		1	1	93343655	443
ENSMUSG00000005299	protein_coding	Letm1	ENSMUST00000148451	protein_coding		5	-1	33782737	2478
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000182601	lincRNA		16	1	77329205	1035
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000219175	retained_intron		10	1	51490963	2405
ENSMUSG00000025163	protein_coding	Cd7	ENSMUST00000026159	protein_coding	principal1	11	-1	121039418	982
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000219848	retained_intron		10	1	51490970	2403
ENSMUSG00000107149	processed_pseudogene	Gm30708	ENSMUST00000202183	processed_pseudogene		5	1	33774912	312
ENSMUSG00000026275	protein_coding	Ppp1r7	ENSMUST00000127141	nonsense_mediated_decay		1	1	93343707	634
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000170849	lincRNA		16	1	77329259	2176
ENSMUSG00000081542	processed_pseudogene	Gm12512	ENSMUST00000119620	processed_pseudogene		4	-1	55282280	217
ENSMUSG00000025163	protein_coding	Cd7	ENSMUST00000163465	retained_intron		11	-1	121039418	592
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000182748	retained_intron		16	1	77329328	3151
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000220402	retained_intron		10	1	51490971	3738
ENSMUSG00000071573	polymorphic_pseudogene	Rnls	ENSMUST00000163093	protein_coding	principal1	19	-1	33392295	1378
ENSMUSG00000027001	protein_coding	Dusp19	ENSMUST00000125033	processed_transcript		2	1	80617231	726
ENSMUSG00000092397	antisense	C130080G10Rik	ENSMUST00000155185	antisense		2	1	114056313	954
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000182820	lincRNA		16	1	77329504	835
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000134700	protein_coding		11	-1	70236904	540
ENSMUSG00000027001	protein_coding	Dusp19	ENSMUST00000151204	processed_transcript		2	1	80617266	1993
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000193530	TEC		16	1	77457043	2485
ENSMUSG00000049532	protein_coding	Sall2	ENSMUST00000135523	protein_coding	alternative2	14	-1	52316323	4773
ENSMUSG00000033703	protein_coding	Fcsk	ENSMUST00000212971	nonsense_mediated_decay		8	-1	110902488	3972
ENSMUSG00000039577	protein_coding	Nphp4	ENSMUST00000056567	protein_coding	principal1	4	1	152484370	4583
ENSMUSG00000026274	protein_coding	Pask	ENSMUST00000128655	retained_intron		1	-1	93317413	2489
ENSMUSG00000020176	protein_coding	Grb10	ENSMUST00000093321	protein_coding	principal3	11	-1	12037401	5061
ENSMUSG00000025991	protein_coding	Cps1	ENSMUST00000027144	protein_coding	principal1	1	1	67123026	5555
ENSMUSG00000044072	protein_coding	Eml6	ENSMUST00000123881	retained_intron		11	-1	29764233	2432
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000218340	retained_intron		10	1	51490974	2480
ENSMUSG00000026142	protein_coding	Rhbdd1	ENSMUST00000027322	protein_coding	principal1	1	1	82316452	3636
ENSMUSG00000049532	protein_coding	Sall2	ENSMUST00000058326	protein_coding	principal2	14	-1	52328762	5147
ENSMUSG00000044072	protein_coding	Eml6	ENSMUST00000142651	retained_intron		11	-1	29751465	907
ENSMUSG00000020176	protein_coding	Grb10	ENSMUST00000142877	processed_transcript		11	-1	11956024	3341
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000068704	lincRNA		16	1	77500216	2858
ENSMUSG00000094194	IG_V_gene	Ighv5-16	ENSMUST00000193652	IG_V_gene	principal5	12	-1	113839010	380
ENSMUSG00000003868	protein_coding	Ruvbl2	ENSMUST00000211214	protein_coding	principal1	7	-1	45438096	2312
ENSMUSG00000044072	protein_coding	Eml6	ENSMUST00000137017	retained_intron		11	-1	29749518	330
ENSMUSG00000026142	protein_coding	Rhbdd1	ENSMUST00000187475	retained_intron		1	1	82316642	3089
ENSMUSG00000094194	IG_V_gene	Ighv5-16	ENSMUST00000103458	IG_V_gene	alternative2	12	-1	113838983	350
ENSMUSG00000020176	protein_coding	Grb10	ENSMUST00000148254	processed_transcript		11	-1	11946330	351
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000183327	lincRNA		16	1	77500384	585
ENSMUSG00000044072	protein_coding	Eml6	ENSMUST00000137689	nonsense_mediated_decay		11	-1	29760049	948
ENSMUSG00000003868	protein_coding	Ruvbl2	ENSMUST00000209426	protein_coding		7	-1	45422801	396
ENSMUSG00000026142	protein_coding	Rhbdd1	ENSMUST00000140020	protein_coding	principal1	1	1	82339049	3687
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000194553	TEC		16	1	77593828	2247
ENSMUSG00000036459	protein_coding	Wtip	ENSMUST00000038537	protein_coding	principal1	7	-1	34133268	1962
ENSMUSG00000020176	protein_coding	Grb10	ENSMUST00000124587	processed_transcript		11	-1	11938616	479
ENSMUSG00000095030	protein_coding	Olfr1513	ENSMUST00000215147	protein_coding	principal1	14	-1	52356408	2873
ENSMUSG00000044072	protein_coding	Eml6	ENSMUST00000169980	retained_intron		11	-1	29803099	613
ENSMUSG00000003868	protein_coding	Ruvbl2	ENSMUST00000210271	protein_coding		7	-1	45422495	219
ENSMUSG00000030894	protein_coding	Tpp1	ENSMUST00000033184	protein_coding	principal1	7	-1	105752235	3558
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000182986	lincRNA		16	1	77594366	408
ENSMUSG00000095030	protein_coding	Olfr1513	ENSMUST00000089739	protein_coding	principal1	14	-1	52350044	942
ENSMUSG00000044072	protein_coding	Eml6	ENSMUST00000109452	nonsense_mediated_decay		11	-1	29821662	474
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000231957	lincRNA		16	1	77594902	680
ENSMUSG00000100786	antisense	Gm28940	ENSMUST00000187929	antisense		1	-1	82402746	1682
ENSMUSG00000020176	protein_coding	Grb10	ENSMUST00000109654	protein_coding	alternative2	11	-1	12027971	4755
ENSMUSG00000104493	TEC	Gm19552	ENSMUST00000194744	TEC		1	1	82352217	2833
ENSMUSG00000030325	protein_coding	Klrb1c	ENSMUST00000167691	protein_coding	principal3	6	-1	128788641	2623
ENSMUSG00000003868	protein_coding	Ruvbl2	ENSMUST00000107771	protein_coding	principal1	7	-1	45434623	1834
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000183166	lincRNA		16	1	77670355	318
ENSMUSG00000090386	processed_transcript	Mir99ahg	ENSMUST00000182091	lincRNA		16	1	77679899	288
ENSMUSG00000035686	protein_coding	Thrsp	ENSMUST00000043077	protein_coding	principal1	7	-1	97417730	1277
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000078778	protein_coding	principal2	10	1	51490997	1381
ENSMUSG00000102344	TEC	9430053O09Rik	ENSMUST00000192654	TEC		16	-1	77421820	2570
ENSMUSG00000103805	TEC	Gm37063	ENSMUST00000194678	TEC		16	1	77476934	3520
ENSMUSG00000036459	protein_coding	Wtip	ENSMUST00000205914	processed_transcript		7	-1	34128037	500
ENSMUSG00000003868	protein_coding	Ruvbl2	ENSMUST00000211478	retained_intron		7	-1	45424278	474
ENSMUSG00000035686	protein_coding	Thrsp	ENSMUST00000206613	retained_intron		7	-1	97417519	1400
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000220182	protein_coding	alternative2	10	1	51490997	1279
ENSMUSG00000036459	protein_coding	Wtip	ENSMUST00000123813	retained_intron		7	-1	34119060	531
ENSMUSG00000102289	TEC	Gm31258	ENSMUST00000194532	TEC		16	-1	77305560	3297
ENSMUSG00000003868	protein_coding	Ruvbl2	ENSMUST00000210439	protein_coding		7	-1	45434277	725
ENSMUSG00000102575	TEC	Gm37241	ENSMUST00000191736	TEC		16	1	77486046	523
ENSMUSG00000100813	lincRNA	Gm28874	ENSMUST00000190917	lincRNA		4	1	132265708	3134
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000220226	protein_coding		10	1	51490998	359
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000220166	retained_intron		10	1	51491005	3769
ENSMUSG00000003868	protein_coding	Ruvbl2	ENSMUST00000211440	nonsense_mediated_decay		7	-1	45431373	585
ENSMUSG00000003868	protein_coding	Ruvbl2	ENSMUST00000211666	protein_coding		7	-1	45434709	846
ENSMUSG00000036459	protein_coding	Wtip	ENSMUST00000140911	nonsense_mediated_decay		7	-1	34132818	968
ENSMUSG00000001134	protein_coding	Uxt	ENSMUST00000129899	processed_transcript		X	-1	20961991	391
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000218617	nonsense_mediated_decay		10	1	51491018	1378
ENSMUSG00000039577	protein_coding	Nphp4	ENSMUST00000142027	processed_transcript		4	1	152476706	4465
ENSMUSG00000095571	IG_V_gene	Ighv5-17	ENSMUST00000103459	IG_V_gene	principal1	12	-1	113859670	405
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000218217	retained_intron		10	1	51493122	1516
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000219029	retained_intron		10	1	51493515	1832
ENSMUSG00000112148	protein_coding	Lilrb4a	ENSMUST00000218753	retained_intron		10	1	51495216	1279
ENSMUSG00000030325	protein_coding	Klrb1c	ENSMUST00000174404	protein_coding	alternative2	6	-1	128788641	1658
ENSMUSG00000024824	protein_coding	Rad9a	ENSMUST00000025740	protein_coding	principal1	19	-1	4201636	2081
ENSMUSG00000099937	lincRNA	Gm28872	ENSMUST00000191518	lincRNA		4	1	132270056	158
ENSMUSG00000071660	protein_coding	Ttc9c	ENSMUST00000096751	protein_coding	principal1	19	-1	8819333	3509
ENSMUSG00000039577	protein_coding	Nphp4	ENSMUST00000153759	processed_transcript		4	1	152478178	1273
ENSMUSG00000103893	IG_V_pseudogene	Ighv5-18	ENSMUST00000193834	IG_V_pseudogene		12	-1	113876239	326
ENSMUSG00000030325	protein_coding	Klrb1c	ENSMUST00000172601	protein_coding		6	-1	128788486	901
ENSMUSG00000108990	processed_pseudogene	Gm44648	ENSMUST00000208267	processed_pseudogene		7	1	100571922	329
ENSMUSG00000027284	protein_coding	Cdan1	ENSMUST00000110700	protein_coding	alternative2	2	-1	120731518	5996
ENSMUSG00000039577	protein_coding	Nphp4	ENSMUST00000123635	processed_transcript		4	1	152502914	644
ENSMUSG00000081950	processed_pseudogene	Gm11600	ENSMUST00000119592	processed_pseudogene		1	-1	62657788	240
ENSMUSG00000030325	protein_coding	Klrb1c	ENSMUST00000174865	protein_coding		6	-1	128789215	614
ENSMUSG00000071660	protein_coding	Ttc9c	ENSMUST00000153281	protein_coding		19	-1	8818924	1192
ENSMUSG00000039577	protein_coding	Nphp4	ENSMUST00000146223	processed_transcript		4	1	152488350	600
ENSMUSG00000071660	protein_coding	Ttc9c	ENSMUST00000088092	protein_coding	principal1	19	-1	8819294	1585
ENSMUSG00000076733	IG_V_gene	Ighv8-13	ENSMUST00000164041	IG_V_gene	principal5	12	-1	115765635	299
ENSMUSG00000071660	protein_coding	Ttc9c	ENSMUST00000148090	retained_intron		19	-1	8819232	600
ENSMUSG00000076733	IG_V_gene	Ighv8-13	ENSMUST00000103542	IG_V_gene	alternative2	12	-1	115765635	303
ENSMUSG00000087694	processed_transcript	A530058N18Rik	ENSMUST00000141209	antisense		2	1	114013602	709
ENSMUSG00000114714	TEC	Gm48763	ENSMUST00000224213	TEC		13	-1	36459280	834
ENSMUSG00000039577	protein_coding	Nphp4	ENSMUST00000081393	protein_coding	principal1	4	1	152478142	5027
ENSMUSG00000036721	protein_coding	Zscan12	ENSMUST00000225545	protein_coding	principal1	13	1	21362820	4405
ENSMUSG00000114371	processed_pseudogene	Gm48769	ENSMUST00000224673	processed_pseudogene		13	-1	36183048	337
ENSMUSG00000030894	protein_coding	Tpp1	ENSMUST00000210840	retained_intron		7	-1	105752213	3687
ENSMUSG00000114857	antisense	Gm48770	ENSMUST00000225071	antisense		13	1	35995453	1249
ENSMUSG00000030894	protein_coding	Tpp1	ENSMUST00000210018	retained_intron		7	-1	105749132	723
ENSMUSG00000114617	TEC	Gm48766	ENSMUST00000225563	TEC		13	1	36252359	4562
ENSMUSG00000036721	protein_coding	Zscan12	ENSMUST00000053293	protein_coding	principal1	13	1	21362832	2270
ENSMUSG00000114746	TEC	4933436N17Rik	ENSMUST00000225768	TEC		13	-1	36583526	1436
ENSMUSG00000030894	protein_coding	Tpp1	ENSMUST00000210066	nonsense_mediated_decay		7	-1	105752217	742
ENSMUSG00000036721	protein_coding	Zscan12	ENSMUST00000099720	protein_coding	principal1	13	1	21363285	2182
ENSMUSG00000024824	protein_coding	Rad9a	ENSMUST00000237467	retained_intron		19	-1	4201607	2101
ENSMUSG00000106807	antisense	Gm10441	ENSMUST00000200950	antisense		5	-1	53522731	1546
ENSMUSG00000081191	processed_pseudogene	Gm11271	ENSMUST00000116054	processed_pseudogene		13	-1	21381130	440
ENSMUSG00000024824	protein_coding	Rad9a	ENSMUST00000237723	protein_coding		19	-1	4201662	475
ENSMUSG00000087694	processed_transcript	A530058N18Rik	ENSMUST00000135729	antisense		2	1	114013710	1405
ENSMUSG00000024824	protein_coding	Rad9a	ENSMUST00000235367	retained_intron		19	-1	4200498	644
ENSMUSG00000087694	processed_transcript	A530058N18Rik	ENSMUST00000128469	antisense		2	1	114013711	646
ENSMUSG00000024824	protein_coding	Rad9a	ENSMUST00000237963	retained_intron		19	-1	4200318	399
ENSMUSG00000025047	protein_coding	Pdcd11	ENSMUST00000072141	protein_coding	principal1	19	1	47090768	6761
ENSMUSG00000024824	protein_coding	Rad9a	ENSMUST00000235742	retained_intron		19	-1	4201614	710
ENSMUSG00000046573	protein_coding	Lyrm4	ENSMUST00000053265	protein_coding	principal1	13	-1	36117526	2086
ENSMUSG00000024383	protein_coding	Map3k2	ENSMUST00000234576	retained_intron		18	1	32163089	2989
ENSMUSG00000087694	processed_transcript	A530058N18Rik	ENSMUST00000152254	antisense		2	1	114013713	1211
ENSMUSG00000025047	protein_coding	Pdcd11	ENSMUST00000235871	retained_intron		19	1	47126150	2332
ENSMUSG00000024824	protein_coding	Rad9a	ENSMUST00000237278	nonsense_mediated_decay		19	-1	4201594	730
ENSMUSG00000001134	protein_coding	Uxt	ENSMUST00000123836	protein_coding	principal1	X	-1	20962017	875
ENSMUSG00000027284	protein_coding	Cdan1	ENSMUST00000148285	processed_transcript		2	-1	120850128	8046
ENSMUSG00000062593	protein_coding	Gm49339	ENSMUST00000218123	nonsense_mediated_decay		10	1	51480612	1858
ENSMUSG00000025047	protein_coding	Pdcd11	ENSMUST00000236656	retained_intron		19	1	47128658	2594
ENSMUSG00000111107	TEC	Gm48737	ENSMUST00000216975	TEC		9	1	41618992	2312
ENSMUSG00000114851	sense_intronic	Gm46409	ENSMUST00000225239	sense_intronic		13	1	36612816	5740
ENSMUSG00000024383	protein_coding	Map3k2	ENSMUST00000234611	retained_intron		18	1	32163093	1852
ENSMUSG00000087694	processed_transcript	A530058N18Rik	ENSMUST00000147411	retained_intron		2	1	114013726	3854
ENSMUSG00000111854	lincRNA	Gm48740	ENSMUST00000213487	lincRNA		9	-1	41559259	1801
ENSMUSG00000024824	protein_coding	Rad9a	ENSMUST00000237923	protein_coding		19	-1	4201627	544
ENSMUSG00000114851	sense_intronic	Gm46409	ENSMUST00000223798	sense_intronic		13	1	36612930	1445
ENSMUSG00000111854	lincRNA	Gm48740	ENSMUST00000213560	lincRNA		9	-1	41559259	2248
ENSMUSG00000114380	processed_pseudogene	Gm47942	ENSMUST00000225253	processed_pseudogene		13	-1	58668839	216
ENSMUSG00000027284	protein_coding	Cdan1	ENSMUST00000126753	processed_transcript		2	-1	120720553	458
ENSMUSG00000114851	sense_intronic	Gm46409	ENSMUST00000226032	sense_intronic		13	1	36612972	1906
ENSMUSG00000087694	processed_transcript	A530058N18Rik	ENSMUST00000143993	antisense		2	1	114013744	550
ENSMUSG00000030894	protein_coding	Tpp1	ENSMUST00000210730	processed_transcript		7	-1	105752095	759
ENSMUSG00000114387	antisense	Gm48767	ENSMUST00000224459	antisense		13	-1	36575934	2891
ENSMUSG00000033703	protein_coding	Fcsk	ENSMUST00000041382	protein_coding	principal1	8	-1	110902459	3838
ENSMUSG00000087694	processed_transcript	A530058N18Rik	ENSMUST00000134129	antisense		2	1	114013745	411
ENSMUSG00000030894	protein_coding	Tpp1	ENSMUST00000210395	retained_intron		7	-1	105752198	801
ENSMUSG00000027284	protein_coding	Cdan1	ENSMUST00000124906	retained_intron		2	-1	120724455	1246
ENSMUSG00000030894	protein_coding	Tpp1	ENSMUST00000211659	processed_transcript		7	-1	105752092	583
ENSMUSG00000114325	processed_pseudogene	Rpl13-ps2	ENSMUST00000225684	processed_pseudogene		13	1	58756551	614
ENSMUSG00000027284	protein_coding	Cdan1	ENSMUST00000126133	retained_intron		2	-1	120727977	1113
ENSMUSG00000114340	processed_pseudogene	Gm18132	ENSMUST00000223564	processed_pseudogene		13	1	35992132	1300
ENSMUSG00000030894	protein_coding	Tpp1	ENSMUST00000211226	processed_transcript		7	-1	105752215	474
ENSMUSG00000114407	antisense	Gm48765	ENSMUST00000223888	antisense		13	-1	36189723	2313
ENSMUSG00000033703	protein_coding	Fcsk	ENSMUST00000212242	retained_intron		8	-1	110899500	706
ENSMUSG00000030894	protein_coding	Tpp1	ENSMUST00000211204	processed_transcript		7	-1	105752196	405
ENSMUSG00000035835	protein_coding	Plppr3	ENSMUST00000167250	protein_coding	alternative2	10	-1	79874570	3063
ENSMUSG00000027284	protein_coding	Cdan1	ENSMUST00000152692	retained_intron		2	-1	120728638	554
ENSMUSG00000114384	lincRNA	4930455J16Rik	ENSMUST00000223707	lincRNA		13	-1	58762350	3911
ENSMUSG00000001134	protein_coding	Uxt	ENSMUST00000150719	retained_intron		X	-1	20961915	659
ENSMUSG00000030894	protein_coding	Tpp1	ENSMUST00000211560	retained_intron		7	-1	105752196	413
ENSMUSG00000114384	lincRNA	4930455J16Rik	ENSMUST00000225693	lincRNA		13	-1	58762311	1627
ENSMUSG00000033703	protein_coding	Fcsk	ENSMUST00000212568	retained_intron		8	-1	110902448	2268
ENSMUSG00000027284	protein_coding	Cdan1	ENSMUST00000150860	processed_transcript		2	-1	120731506	670
ENSMUSG00000068615	protein_coding	Gjd2	ENSMUST00000090275	protein_coding	principal1	2	-1	114013619	2879
ENSMUSG00000020160	protein_coding	Meis1	ENSMUST00000144988	protein_coding		11	-1	19018985	7553
ENSMUSG00000114384	lincRNA	4930455J16Rik	ENSMUST00000224184	lincRNA		13	-1	58762360	2673
ENSMUSG00000114384	lincRNA	4930455J16Rik	ENSMUST00000223974	lincRNA		13	-1	58762347	1391
ENSMUSG00000027284	protein_coding	Cdan1	ENSMUST00000136725	processed_transcript		2	-1	120731490	762
ENSMUSG00000001134	protein_coding	Uxt	ENSMUST00000001162	processed_transcript		X	-1	20962000	636
ENSMUSG00000107976	TEC	Gm44043	ENSMUST00000203426	TEC		6	1	149570409	3253
ENSMUSG00000096299	lincRNA	Gm21814	ENSMUST00000203277	lincRNA		6	1	149566090	873
ENSMUSG00000096299	lincRNA	Gm21814	ENSMUST00000203729	lincRNA		6	1	149566132	1352
ENSMUSG00000020160	protein_coding	Meis1	ENSMUST00000102878	nonsense_mediated_decay		11	-1	19018714	3095
ENSMUSG00000114384	lincRNA	4930455J16Rik	ENSMUST00000224680	lincRNA		13	-1	58762311	2733
ENSMUSG00000091165	antisense	Gm17036	ENSMUST00000168187	antisense		18	1	6213913	254
ENSMUSG00000096299	lincRNA	Gm21814	ENSMUST00000144085	lincRNA		6	1	149582012	291
ENSMUSG00000015149	protein_coding	Sirt2	ENSMUST00000122915	protein_coding	alternative1	7	1	28766735	1828
ENSMUSG00000117519	antisense	Gm41664	ENSMUST00000234972	antisense		18	1	6240814	523
ENSMUSG00000026274	protein_coding	Pask	ENSMUST00000027493	protein_coding	principal1	1	-1	93342789	5779
ENSMUSG00000114808	lincRNA	Gm47947	ENSMUST00000224161	lincRNA		13	1	58762385	648
ENSMUSG00000114231	lincRNA	Gm40968	ENSMUST00000223670	lincRNA		13	-1	58797448	3757
ENSMUSG00000001134	protein_coding	Uxt	ENSMUST00000142341	retained_intron		X	-1	20961986	714
ENSMUSG00000001134	protein_coding	Uxt	ENSMUST00000147205	processed_transcript		X	-1	20961974	411
ENSMUSG00000027284	protein_coding	Cdan1	ENSMUST00000110701	protein_coding	principal2	2	-1	120731517	6384
ENSMUSG00000026274	protein_coding	Pask	ENSMUST00000133886	retained_intron		1	-1	93313148	912
ENSMUSG00000062593	protein_coding	Gm49339	ENSMUST00000219696	protein_coding	principal5	10	1	51480640	1441
ENSMUSG00000026274	protein_coding	Pask	ENSMUST00000148355	retained_intron		1	-1	93311344	742
ENSMUSG00000003865	protein_coding	Gys1	ENSMUST00000003964	protein_coding	principal1	7	1	45434844	3678
ENSMUSG00000062593	protein_coding	Gm49339	ENSMUST00000217706	protein_coding	alternative2	10	1	51480640	1340
ENSMUSG00000003865	protein_coding	Gys1	ENSMUST00000211150	protein_coding		7	1	45434877	2681
ENSMUSG00000047417	protein_coding	Rexo1	ENSMUST00000182682	retained_intron		10	-1	80545836	3533
ENSMUSG00000053799	protein_coding	Exoc6	ENSMUST00000238954	protein_coding	alternative2	19	1	37520879	3728
ENSMUSG00000035835	protein_coding	Plppr3	ENSMUST00000113452	retained_intron		10	-1	79874366	2521
ENSMUSG00000092201	processed_transcript	A530058N18Rik	ENSMUST00000131299	antisense		2	1	114013563	1387
ENSMUSG00000035835	protein_coding	Plppr3	ENSMUST00000166057	retained_intron		10	-1	79874570	2843
ENSMUSG00000086877	processed_transcript	A230072C01Rik	ENSMUST00000123462	processed_transcript		X	1	20961684	1144
ENSMUSG00000086877	processed_transcript	A230072C01Rik	ENSMUST00000136447	processed_transcript		X	1	20962114	1412
ENSMUSG00000092201	processed_transcript	A530058N18Rik	ENSMUST00000140041	processed_transcript		2	1	114013567	1376
ENSMUSG00000054342	protein_coding	Kcnn4	ENSMUST00000205428	protein_coding	principal1	7	1	24370263	1945
ENSMUSG00000003865	protein_coding	Gys1	ENSMUST00000210715	processed_transcript		7	1	45447605	480
ENSMUSG00000026274	protein_coding	Pask	ENSMUST00000139028	retained_intron		1	-1	93343465	5641
ENSMUSG00000053799	protein_coding	Exoc6	ENSMUST00000066439	protein_coding	principal2	19	1	37550418	3543
ENSMUSG00000003865	protein_coding	Gys1	ENSMUST00000210563	retained_intron		7	1	45447731	605
ENSMUSG00000026274	protein_coding	Pask	ENSMUST00000128253	protein_coding		1	-1	93343482	349
ENSMUSG00000003865	protein_coding	Gys1	ENSMUST00000209640	protein_coding		7	1	45448254	904
ENSMUSG00000053799	protein_coding	Exoc6	ENSMUST00000238817	protein_coding	alternative2	19	1	37550459	2692
ENSMUSG00000020160	protein_coding	Meis1	ENSMUST00000068264	protein_coding	alternative1	11	-1	19018958	3196
ENSMUSG00000003865	protein_coding	Gys1	ENSMUST00000209230	retained_intron		7	1	45451025	1000
ENSMUSG00000035835	protein_coding	Plppr3	ENSMUST00000092325	protein_coding	principal3	10	-1	79874634	2766
ENSMUSG00000040945	protein_coding	Rcc2	ENSMUST00000071169	protein_coding	principal1	4	1	140700541	3999
ENSMUSG00000015149	protein_coding	Sirt2	ENSMUST00000072965	protein_coding	principal3	7	1	28766767	1843
ENSMUSG00000054342	protein_coding	Kcnn4	ENSMUST00000171904	protein_coding	principal1	7	1	24370299	1990
ENSMUSG00000100681	lincRNA	1700064J06Rik	ENSMUST00000187551	lincRNA		10	1	119092905	386
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000179030	protein_coding	principal2	1	-1	54926387	6140
ENSMUSG00000035835	protein_coding	Plppr3	ENSMUST00000170910	retained_intron		10	-1	79867281	761
ENSMUSG00000112609	lincRNA	Gm47480	ENSMUST00000220151	lincRNA		10	1	119111624	811
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000178156	protein_coding		1	-1	54657687	980
ENSMUSG00000054342	protein_coding	Kcnn4	ENSMUST00000205626	protein_coding		7	1	24370338	461
ENSMUSG00000029480	protein_coding	Dhx37	ENSMUST00000169485	protein_coding	principal1	5	-1	125434121	4760
ENSMUSG00000040945	protein_coding	Rcc2	ENSMUST00000138808	protein_coding		4	1	140701473	699
ENSMUSG00000035835	protein_coding	Plppr3	ENSMUST00000167897	protein_coding		10	-1	79874224	783
ENSMUSG00000027134	protein_coding	Lpcat4	ENSMUST00000028554	protein_coding	principal1	2	1	112239468	2275
ENSMUSG00000031068	protein_coding	Glrx3	ENSMUST00000064404	protein_coding	principal2	7	1	137437614	1685
ENSMUSG00000020160	protein_coding	Meis1	ENSMUST00000118661	processed_transcript		11	-1	19012002	2008
ENSMUSG00000040945	protein_coding	Rcc2	ENSMUST00000138682	processed_transcript		4	1	140714351	430
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000178226	protein_coding		1	-1	54763728	2368
ENSMUSG00000112161	lincRNA	Gm34045	ENSMUST00000217700	lincRNA		10	-1	119166385	988
ENSMUSG00000100916	protein_coding	Lhb	ENSMUST00000072453	protein_coding	principal1	7	1	45420820	678
ENSMUSG00000040945	protein_coding	Rcc2	ENSMUST00000129838	processed_transcript		4	1	140714378	347
ENSMUSG00000040945	protein_coding	Rcc2	ENSMUST00000038893	protein_coding	principal1	4	1	140701473	3767
ENSMUSG00000029480	protein_coding	Dhx37	ENSMUST00000196371	protein_coding		5	-1	125415897	411
ENSMUSG00000054342	protein_coding	Kcnn4	ENSMUST00000205881	retained_intron		7	1	24382170	614
ENSMUSG00000020160	protein_coding	Meis1	ENSMUST00000177417	protein_coding		11	-1	19018714	5308
ENSMUSG00000031068	protein_coding	Glrx3	ENSMUST00000211496	protein_coding	alternative2	7	1	137437655	3440
ENSMUSG00000054342	protein_coding	Kcnn4	ENSMUST00000206910	retained_intron		7	1	24383054	3637
ENSMUSG00000015149	protein_coding	Sirt2	ENSMUST00000170068	protein_coding		7	1	28766816	1585
ENSMUSG00000117834	processed_pseudogene	Gm50429	ENSMUST00000236019	processed_pseudogene		19	1	59180655	778
ENSMUSG00000035835	protein_coding	Plppr3	ENSMUST00000165601	protein_coding		10	-1	79874408	932
ENSMUSG00000029480	protein_coding	Dhx37	ENSMUST00000196444	retained_intron		5	-1	125418849	751
ENSMUSG00000027134	protein_coding	Lpcat4	ENSMUST00000136219	processed_transcript		2	1	112241485	865
ENSMUSG00000031068	protein_coding	Glrx3	ENSMUST00000209696	protein_coding		7	1	137437656	508
ENSMUSG00000020160	protein_coding	Meis1	ENSMUST00000177357	nonsense_mediated_decay		11	-1	19016289	1530
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233562	lincRNA		9	1	41327077	1452
ENSMUSG00000029480	protein_coding	Dhx37	ENSMUST00000198746	nonsense_mediated_decay		5	-1	125426732	662
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233001	lincRNA		9	1	41327142	1305
ENSMUSG00000015149	protein_coding	Sirt2	ENSMUST00000155327	protein_coding	alternative1	7	1	28767254	2117
ENSMUSG00000027134	protein_coding	Lpcat4	ENSMUST00000132314	processed_transcript		2	1	112241972	678
ENSMUSG00000035992	protein_coding	Fnip1	ENSMUST00000046835	protein_coding	principal1	11	1	54438199	6255
ENSMUSG00000015149	protein_coding	Sirt2	ENSMUST00000207322	retained_intron		7	1	28775704	2114
ENSMUSG00000031068	protein_coding	Glrx3	ENSMUST00000211769	nonsense_mediated_decay		7	1	137437665	817
ENSMUSG00000035835	protein_coding	Plppr3	ENSMUST00000163111	processed_transcript		10	-1	79874389	829
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000177704	retained_intron		1	-1	54690947	2533
ENSMUSG00000027134	protein_coding	Lpcat4	ENSMUST00000129503	processed_transcript		2	1	112244582	732
ENSMUSG00000015149	protein_coding	Sirt2	ENSMUST00000141077	retained_intron		7	1	28776858	643
ENSMUSG00000035992	protein_coding	Fnip1	ENSMUST00000143650	protein_coding		11	1	54464560	2738
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000179242	retained_intron		1	-1	54723076	496
ENSMUSG00000035835	protein_coding	Plppr3	ENSMUST00000167707	protein_coding		10	-1	79874399	602
ENSMUSG00000022200	protein_coding	Golph3	ENSMUST00000228301	processed_transcript		15	1	12321450	912
ENSMUSG00000031068	protein_coding	Glrx3	ENSMUST00000211598	processed_transcript		7	1	137437689	867
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000179398	retained_intron		1	-1	54724423	1856
ENSMUSG00000040901	protein_coding	Kcnk18	ENSMUST00000065204	protein_coding	principal1	19	1	59219214	3470
ENSMUSG00000113364	processed_pseudogene	Gm48059	ENSMUST00000222044	processed_pseudogene		12	-1	67345750	163
ENSMUSG00000015149	protein_coding	Sirt2	ENSMUST00000153956	retained_intron		7	1	28777008	792
ENSMUSG00000020160	protein_coding	Meis1	ENSMUST00000125722	retained_intron		11	-1	19018922	2784
ENSMUSG00000035835	protein_coding	Plppr3	ENSMUST00000166023	protein_coding		10	-1	79874370	333
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000178685	retained_intron		1	-1	54735644	1606
ENSMUSG00000020160	protein_coding	Meis1	ENSMUST00000137300	retained_intron		11	-1	19018922	2636
ENSMUSG00000099370	lincRNA	Platr10	ENSMUST00000190602	lincRNA		3	-1	75655731	1026
ENSMUSG00000038651	protein_coding	Sycp2l	ENSMUST00000124093	protein_coding	principal1	13	1	41114307	2641
ENSMUSG00000091994	bidirectional_promoter_lncRNA	E130317F20Rik	ENSMUST00000168521	bidirectional_promoter_lncRNA		10	-1	79854956	3265
ENSMUSG00000087112	unprocessed_pseudogene	Gm7237	ENSMUST00000148435	unprocessed_pseudogene		19	-1	33420642	1401
ENSMUSG00000091994	bidirectional_promoter_lncRNA	E130317F20Rik	ENSMUST00000217802	bidirectional_promoter_lncRNA		10	-1	79854971	3420
ENSMUSG00000038651	protein_coding	Sycp2l	ENSMUST00000141292	protein_coding		13	1	41148796	757
ENSMUSG00000113777	processed_pseudogene	Gm48060	ENSMUST00000220799	processed_pseudogene		12	-1	67428244	298
ENSMUSG00000020160	protein_coding	Meis1	ENSMUST00000185131	protein_coding	principal3	11	-1	19018969	3346
ENSMUSG00000113948	processed_pseudogene	Rpl17-ps3	ENSMUST00000221295	processed_pseudogene		12	1	67510756	556
ENSMUSG00000099370	lincRNA	Platr10	ENSMUST00000191479	lincRNA		3	-1	75648657	818
ENSMUSG00000118289	processed_pseudogene	Gm19724	ENSMUST00000236869	processed_pseudogene		19	-1	33447798	186
ENSMUSG00000102188	TEC	Gm37193	ENSMUST00000193087	TEC		3	-1	75699464	513
ENSMUSG00000084085	antisense	Gm16140	ENSMUST00000117191	antisense		11	1	19009128	1060
ENSMUSG00000101630	antisense	Gm29261	ENSMUST00000188535	antisense		19	-1	59261419	678
ENSMUSG00000084085	antisense	Gm16140	ENSMUST00000143706	antisense		11	1	19009130	728
ENSMUSG00000038651	protein_coding	Sycp2l	ENSMUST00000145810	retained_intron		13	1	41153388	662
ENSMUSG00000024383	protein_coding	Map3k2	ENSMUST00000096575	protein_coding	principal1	18	1	32163196	10684
ENSMUSG00000086875	unprocessed_pseudogene	Lipo5	ENSMUST00000156818	unprocessed_pseudogene		19	-1	33473191	1906
ENSMUSG00000118286	processed_pseudogene	Gm8755	ENSMUST00000235755	processed_pseudogene		18	-1	61434201	700
ENSMUSG00000015149	protein_coding	Sirt2	ENSMUST00000132789	processed_transcript		7	1	28784626	561
ENSMUSG00000087160	antisense	Gm16336	ENSMUST00000126011	antisense		7	1	110904985	380
ENSMUSG00000087507	antisense	Gm16141	ENSMUST00000152073	antisense		11	1	19013817	790
ENSMUSG00000021911	protein_coding	Parg	ENSMUST00000164137	protein_coding		14	1	32201949	3013
ENSMUSG00000114010	lincRNA	Gm47432	ENSMUST00000222891	lincRNA		12	1	67651385	853
ENSMUSG00000100962	protein_coding	Gm29133	ENSMUST00000189155	protein_coding	principal1	3	1	75748197	885
ENSMUSG00000015149	protein_coding	Sirt2	ENSMUST00000127953	retained_intron		7	1	28785383	372
ENSMUSG00000113657	processed_pseudogene	Gm17821	ENSMUST00000223448	processed_pseudogene		12	-1	67669276	1693
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000212373	lincRNA		9	1	41327257	1577
ENSMUSG00000104244	TEC	2900018N21Rik	ENSMUST00000195805	TEC		11	-1	18889840	1580
ENSMUSG00000000275	protein_coding	Trim25	ENSMUST00000100627	protein_coding		11	1	88999376	1433
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233277	lincRNA		9	1	41327258	1389
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000232787	lincRNA		9	1	41327258	1182
ENSMUSG00000015149	protein_coding	Sirt2	ENSMUST00000128961	retained_intron		7	1	28785557	774
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000108575	protein_coding		11	-1	70237853	643
ENSMUSG00000104184	TEC	Gm37818	ENSMUST00000194952	TEC		11	-1	18887791	3169
ENSMUSG00000041358	protein_coding	Nutm1	ENSMUST00000043970	protein_coding	principal1	2	-1	112259291	3731
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233028	lincRNA		9	1	41327286	529
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233820	lincRNA		9	1	41328766	1083
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233800	lincRNA		9	1	41376309	1417
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233987	lincRNA		9	1	41376310	1431
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233927	lincRNA		9	1	41376321	1120
ENSMUSG00000116880	processed_pseudogene	Gm49634	ENSMUST00000232449	processed_pseudogene		16	-1	52581408	237
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233406	lincRNA		9	1	41376361	596
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000188945	lincRNA		9	1	41376397	650
ENSMUSG00000044254	protein_coding	Pcsk9	ENSMUST00000049507	protein_coding	principal1	4	-1	106464329	3521
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000232890	lincRNA		9	1	41376437	1676
ENSMUSG00000108912	TEC	E230020D15Rik	ENSMUST00000208097	TEC		8	-1	8635073	5899
ENSMUSG00000109568	TEC	Gm45074	ENSMUST00000209091	TEC		8	-1	8639205	1240
ENSMUSG00000108059	TEC	Gm44369	ENSMUST00000204543	TEC		6	1	86591430	2175
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000187345	lincRNA		9	1	41376526	670
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000021857	protein_coding	principal1	13	1	36117412	2125
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000190109	lincRNA		9	1	41376561	728
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000232964	lincRNA		9	1	41402182	1409
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000223796	protein_coding		13	1	36117654	768
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233321	lincRNA		9	1	41474829	2097
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233873	lincRNA		9	1	41474830	1651
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233486	lincRNA		9	1	41474855	1275
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233366	lincRNA		9	1	41474855	1544
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000232710	lincRNA		9	1	41474855	1064
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000188277	lincRNA		9	1	41474855	1212
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233288	lincRNA		9	1	41474855	1084
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000232715	lincRNA		9	1	41474867	2356
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233833	lincRNA		9	1	41474868	1721
ENSMUSG00000037935	protein_coding	Smarce1	ENSMUST00000103133	protein_coding	principal1	11	-1	99231017	2919
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000108579	protein_coding		11	-1	70237904	667
ENSMUSG00000068614	protein_coding	Actc1	ENSMUST00000090269	protein_coding	principal1	2	-1	114052887	1473
ENSMUSG00000041333	protein_coding	Mup4	ENSMUST00000075973	protein_coding	principal1	4	-1	59960710	922
ENSMUSG00000027296	protein_coding	Itpka	ENSMUST00000028758	protein_coding	principal1	2	1	119742337	1818
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000181814	lincRNA		9	1	41474937	2996
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000232773	lincRNA		9	1	41474984	1321
ENSMUSG00000037935	protein_coding	Smarce1	ENSMUST00000156160	processed_transcript		11	-1	99213443	610
ENSMUSG00000068614	protein_coding	Actc1	ENSMUST00000149125	protein_coding		2	-1	114053548	303
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000099582	protein_coding		13	1	36117858	962
ENSMUSG00000022200	protein_coding	Golph3	ENSMUST00000059680	protein_coding	principal1	15	1	12321450	2652
ENSMUSG00000037935	protein_coding	Smarce1	ENSMUST00000155062	processed_transcript		11	-1	99220831	481
ENSMUSG00000033705	protein_coding	Stard9	ENSMUST00000180041	protein_coding	principal1	2	1	120629121	15004
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233563	lincRNA		9	1	41475060	514
ENSMUSG00000030704	protein_coding	Rab6a	ENSMUST00000107048	protein_coding		7	1	100607410	2617
ENSMUSG00000022200	protein_coding	Golph3	ENSMUST00000227895	retained_intron		15	1	12321458	906
ENSMUSG00000118229	lincRNA	Lncbate10	ENSMUST00000235256	lincRNA		18	-1	61484607	1808
ENSMUSG00000109973	lincRNA	Gm45397	ENSMUST00000209816	lincRNA		7	-1	137564588	1600
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000216299	retained_intron		9	1	41575879	3267
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000188774	lincRNA		9	1	41579494	3312
ENSMUSG00000110145	TEC	Gm45683	ENSMUST00000210825	TEC		7	1	137649089	1247
ENSMUSG00000022200	protein_coding	Golph3	ENSMUST00000226517	protein_coding		15	1	12321496	2359
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000178935	retained_intron		1	-1	54926354	2299
ENSMUSG00000110090	lincRNA	Gm45682	ENSMUST00000209434	lincRNA		7	1	137734266	1256
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000177919	retained_intron		1	-1	54766423	639
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000225525	processed_transcript		13	1	36117872	616
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000180189	processed_transcript		1	-1	54768827	1362
ENSMUSG00000022200	protein_coding	Golph3	ENSMUST00000228671	protein_coding		15	1	12321635	2842
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000181214	lincRNA		9	1	41579623	3876
ENSMUSG00000109834	processed_pseudogene	Gm5650	ENSMUST00000209641	processed_pseudogene		7	1	138062006	598
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233256	lincRNA		9	1	41579753	730
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233968	lincRNA		9	1	41579978	450
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000180327	retained_intron		1	-1	54926387	2501
ENSMUSG00000111316	processed_pseudogene	Gm47344	ENSMUST00000214319	processed_pseudogene		10	-1	93397273	184
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233107	lincRNA		9	1	41579978	954
ENSMUSG00000037935	protein_coding	Smarce1	ENSMUST00000135040	processed_transcript		11	-1	99230445	761
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000224611	protein_coding	principal1	13	1	36117875	1750
ENSMUSG00000037935	protein_coding	Smarce1	ENSMUST00000128707	processed_transcript		11	-1	99230413	456
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233926	lincRNA		9	1	41580781	698
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000178905	processed_transcript		1	-1	54813443	767
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000224916	nonsense_mediated_decay		13	1	36117880	3366
ENSMUSG00000037935	protein_coding	Smarce1	ENSMUST00000128215	processed_transcript		11	-1	99230446	3117
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000224241	protein_coding	principal1	13	1	36129900	1665
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000180622	lincRNA		9	1	41581253	354
ENSMUSG00000025094	protein_coding	Slc18a2	ENSMUST00000026084	protein_coding	principal1	19	1	59260896	3785
ENSMUSG00000033705	protein_coding	Stard9	ENSMUST00000140843	nonsense_mediated_decay		2	1	120629126	15399
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000177679	protein_coding		1	-1	54884711	519
ENSMUSG00000067365	protein_coding	Tmem128	ENSMUST00000087511	protein_coding	principal1	5	1	38260185	1291
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000224540	retained_intron		13	1	36232122	407
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000180818	lincRNA		9	1	41581267	581
ENSMUSG00000104686	TEC	Gm42815	ENSMUST00000198787	TEC		5	1	138619288	1470
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000106858	protein_coding	principal3	4	1	103114395	4830
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233719	lincRNA		9	1	41581308	1330
ENSMUSG00000033705	protein_coding	Stard9	ENSMUST00000229722	retained_intron		2	1	120668960	2652
ENSMUSG00000081142	processed_pseudogene	Gm15497	ENSMUST00000119137	processed_pseudogene		5	1	138610739	551
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000232901	lincRNA		9	1	41581333	516
ENSMUSG00000052331	protein_coding	Ankrd44	ENSMUST00000044359	protein_coding	alternative2	1	-1	54926387	6192
ENSMUSG00000033705	protein_coding	Stard9	ENSMUST00000070420	nonsense_mediated_decay		2	1	120701341	4874
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000137348	processed_transcript		4	1	103114431	306
ENSMUSG00000067365	protein_coding	Tmem128	ENSMUST00000201661	retained_intron		5	1	38260371	1939
ENSMUSG00000102503	TEC	Gm37370	ENSMUST00000191996	TEC		1	-1	54738575	1410
ENSMUSG00000067365	protein_coding	Tmem128	ENSMUST00000119047	protein_coding	principal1	5	1	38260384	726
ENSMUSG00000025094	protein_coding	Slc18a2	ENSMUST00000236270	retained_intron		19	1	59260959	4393
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000224619	processed_transcript		13	1	36232270	726
ENSMUSG00000036632	protein_coding	Alg5	ENSMUST00000044567	protein_coding	principal1	3	1	54735539	1471
ENSMUSG00000067365	protein_coding	Tmem128	ENSMUST00000128025	retained_intron		5	1	38260387	827
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233934	lincRNA		9	1	41581339	1647
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000225948	processed_transcript		13	1	36326958	416
ENSMUSG00000000275	protein_coding	Trim25	ENSMUST00000107896	protein_coding	principal2	11	1	88999376	5590
ENSMUSG00000033705	protein_coding	Stard9	ENSMUST00000154193	nonsense_mediated_decay		2	1	120704592	5377
ENSMUSG00000067365	protein_coding	Tmem128	ENSMUST00000142277	protein_coding		5	1	38264897	420
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000181955	lincRNA		9	1	41581339	2578
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233259	lincRNA		9	1	41581339	1526
ENSMUSG00000102892	antisense	Gm37854	ENSMUST00000192149	antisense		3	1	50001972	1463
ENSMUSG00000000275	protein_coding	Trim25	ENSMUST00000000284	protein_coding	alternative2	11	1	88999376	5566
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000233736	lincRNA		9	1	41581341	1255
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000232750	lincRNA		9	1	41581361	2057
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000224357	processed_transcript		13	1	36346694	506
ENSMUSG00000104457	processed_pseudogene	Gm37826	ENSMUST00000195329	processed_pseudogene		3	1	50029669	322
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000232959	lincRNA		9	1	41587769	587
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000223905	retained_intron		13	1	36537097	461
ENSMUSG00000021420	protein_coding	Fars2	ENSMUST00000225048	processed_transcript		13	1	36721926	849
ENSMUSG00000103907	TEC	Gm37498	ENSMUST00000193524	TEC		3	-1	50404283	4002
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000181296	retained_intron		9	1	41588494	4244
ENSMUSG00000114251	processed_pseudogene	Tmed10-ps	ENSMUST00000224867	processed_pseudogene		13	-1	35991520	660
ENSMUSG00000104349	processed_pseudogene	Gm37692	ENSMUST00000192633	processed_pseudogene		3	-1	50166892	232
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000188412	lincRNA		9	1	41600272	353
ENSMUSG00000033705	protein_coding	Stard9	ENSMUST00000141917	retained_intron		2	1	120713720	1760
ENSMUSG00000102167	processed_pseudogene	Gm2345	ENSMUST00000193451	processed_pseudogene		3	1	50254855	589
ENSMUSG00000116876	protein_coding	Gm49721	ENSMUST00000231550	nonsense_mediated_decay	principal1	17	1	6978904	2610
ENSMUSG00000033705	protein_coding	Stard9	ENSMUST00000129384	processed_transcript		2	1	120715268	1870
ENSMUSG00000074415	processed_transcript	Mir100hg	ENSMUST00000098868	processed_transcript		9	1	41580741	3268
ENSMUSG00000079344	protein_coding	Lipo4	ENSMUST00000143522	protein_coding	principal1	19	-1	33517780	2314
ENSMUSG00000030704	protein_coding	Rab6a	ENSMUST00000032946	protein_coding	principal3	7	1	100607586	3214
ENSMUSG00000110801	processed_pseudogene	Gm48736	ENSMUST00000215745	processed_pseudogene		9	-1	41513780	256
ENSMUSG00000110727	lincRNA	Gm48784	ENSMUST00000214294	lincRNA		9	-1	41675054	2331
ENSMUSG00000045374	protein_coding	Wdr81	ENSMUST00000117392	protein_coding		11	-1	75454438	6625
ENSMUSG00000114128	processed_pseudogene	Gm47452	ENSMUST00000222060	processed_pseudogene		12	-1	67822396	379
ENSMUSG00000036632	protein_coding	Alg5	ENSMUST00000141191	nonsense_mediated_decay		3	1	54735559	2972
ENSMUSG00000113182	processed_pseudogene	Gm20102	ENSMUST00000222445	processed_pseudogene		12	-1	67926259	220
ENSMUSG00000100158	sense_intronic	Gm28119	ENSMUST00000185538	sense_intronic		9	1	41581908	298
ENSMUSG00000045374	protein_coding	Wdr81	ENSMUST00000132442	protein_coding		11	-1	75451083	3088
ENSMUSG00000030595	protein_coding	Nfkbib	ENSMUST00000032815	protein_coding	principal1	7	-1	28766640	2061
ENSMUSG00000110885	processed_pseudogene	Gm48739	ENSMUST00000216668	processed_pseudogene		9	1	41419051	432
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000149259	processed_transcript		4	1	103114465	821
ENSMUSG00000030704	protein_coding	Rab6a	ENSMUST00000098252	protein_coding	alternative1	7	1	100607690	3110
ENSMUSG00000036632	protein_coding	Alg5	ENSMUST00000155273	nonsense_mediated_decay		3	1	54735567	940
ENSMUSG00000094083	protein_coding	Gm1604b	ENSMUST00000097422	protein_coding	principal1	17	1	7025568	756
ENSMUSG00000111593	lincRNA	Gm48742	ENSMUST00000215342	lincRNA		9	-1	41532087	2184
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000143417	protein_coding		4	1	103114762	224
ENSMUSG00000111462	lincRNA	Gm49317	ENSMUST00000212079	lincRNA		9	1	41474855	1598
ENSMUSG00000045374	protein_coding	Wdr81	ENSMUST00000135804	processed_transcript		11	-1	75449780	634
ENSMUSG00000046447	protein_coding	Camk2n1	ENSMUST00000050918	protein_coding	principal1	4	1	138454314	4444
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000144219	processed_transcript		4	1	103114956	3144
ENSMUSG00000036632	protein_coding	Alg5	ENSMUST00000143387	retained_intron		3	1	54735573	726
ENSMUSG00000098093	transcribed_processed_pseudogene	Gm8707	ENSMUST00000217362	processed_transcript		9	1	41651893	350
ENSMUSG00000030704	protein_coding	Rab6a	ENSMUST00000123960	retained_intron		7	1	100634348	567
ENSMUSG00000045374	protein_coding	Wdr81	ENSMUST00000173320	protein_coding	principal1	11	-1	75454717	6908
ENSMUSG00000081359	processed_pseudogene	Cox20b	ENSMUST00000119872	processed_pseudogene		7	1	100580267	353
ENSMUSG00000116611	lincRNA	4930404A05Rik	ENSMUST00000232028	lincRNA		16	-1	52815744	712
ENSMUSG00000001300	protein_coding	Efnb2	ENSMUST00000001319	protein_coding	principal1	8	-1	8661242	4793
ENSMUSG00000098093	transcribed_processed_pseudogene	Gm8707	ENSMUST00000183325	transcribed_processed_pseudogene		9	1	41654303	980
ENSMUSG00000030595	protein_coding	Nfkbib	ENSMUST00000085851	protein_coding	principal1	7	-1	28766514	1243
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000134533	protein_coding		4	1	103115272	491
ENSMUSG00000026779	protein_coding	Mastl	ENSMUST00000028119	protein_coding	principal1	2	-1	23156024	5590
ENSMUSG00000001300	protein_coding	Efnb2	ENSMUST00000152698	protein_coding		8	-1	8639363	652
ENSMUSG00000039114	protein_coding	Nrn1	ENSMUST00000224323	protein_coding		13	-1	36730680	1779
ENSMUSG00000094724	protein_coding	Rnaset2b	ENSMUST00000231963	processed_transcript		17	1	6970634	272
ENSMUSG00000030595	protein_coding	Nfkbib	ENSMUST00000137121	protein_coding		7	-1	28767512	572
ENSMUSG00000079442	protein_coding	St6galnac4	ENSMUST00000102818	protein_coding	principal1	2	1	32587095	3626
ENSMUSG00000001300	protein_coding	Efnb2	ENSMUST00000209169	retained_intron		8	-1	8661239	2818
ENSMUSG00000110862	lincRNA	Gm35835	ENSMUST00000216984	lincRNA		9	-1	41737398	3350
ENSMUSG00000063564	protein_coding	Col23a1	ENSMUST00000102765	protein_coding	principal1	11	1	51289920	5658
ENSMUSG00000109438	TEC	Gm45073	ENSMUST00000207688	TEC		8	-1	8647012	4247
ENSMUSG00000063564	protein_coding	Col23a1	ENSMUST00000151098	protein_coding		11	1	51574432	521
ENSMUSG00000110862	lincRNA	Gm35835	ENSMUST00000214447	lincRNA		9	-1	41737380	4589
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000097945	protein_coding	alternative2	4	1	103115638	4698
ENSMUSG00000026779	protein_coding	Mastl	ENSMUST00000136207	processed_transcript		2	-1	23155897	1201
ENSMUSG00000079442	protein_coding	St6galnac4	ENSMUST00000123080	retained_intron		2	1	32587139	1015
ENSMUSG00000105461	processed_pseudogene	Gm4742	ENSMUST00000200261	processed_pseudogene		14	-1	52369688	771
ENSMUSG00000017132	protein_coding	Cyth1	ENSMUST00000017276	protein_coding	alternative1	11	-1	118248560	3135
ENSMUSG00000079442	protein_coding	St6galnac4	ENSMUST00000192934	retained_intron		2	1	32587581	3999
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000147491	processed_transcript		4	1	103117295	379
ENSMUSG00000039114	protein_coding	Nrn1	ENSMUST00000037623	protein_coding	principal1	13	-1	36734477	1619
ENSMUSG00000117713	lincRNA	Gm46637	ENSMUST00000237683	lincRNA		18	1	61484766	2990
ENSMUSG00000040467	lincRNA	4921522P10Rik	ENSMUST00000048606	lincRNA		8	1	8661801	2101
ENSMUSG00000096257	protein_coding	Ccer2	ENSMUST00000178767	protein_coding	principal1	7	1	28756174	1054
ENSMUSG00000017132	protein_coding	Cyth1	ENSMUST00000100181	protein_coding		11	-1	118248502	1592
ENSMUSG00000083527	processed_pseudogene	Gm12001	ENSMUST00000121727	processed_pseudogene		11	-1	12127998	913
ENSMUSG00000079442	protein_coding	St6galnac4	ENSMUST00000146557	nonsense_mediated_decay		2	1	32594276	467
ENSMUSG00000027133	protein_coding	Nop10	ENSMUST00000028553	protein_coding	principal1	2	1	112261926	1109
ENSMUSG00000039114	protein_coding	Nrn1	ENSMUST00000223611	protein_coding		13	-1	36731746	1443
ENSMUSG00000103010	TEC	Gm37504	ENSMUST00000192537	TEC		14	-1	52375526	2374
ENSMUSG00000109372	protein_coding	Gm19410	ENSMUST00000207505	protein_coding	principal1	8	1	35765790	6352
ENSMUSG00000110359	processed_pseudogene	Gm45566	ENSMUST00000209883	processed_pseudogene		8	-1	35801853	1168
ENSMUSG00000094140	protein_coding	Olfr1512	ENSMUST00000214980	protein_coding	principal1	14	-1	52379168	2082
ENSMUSG00000039114	protein_coding	Nrn1	ENSMUST00000122286	protein_coding		13	-1	36730668	691
ENSMUSG00000118121	processed_pseudogene	Gm50233	ENSMUST00000238032	processed_pseudogene		19	-1	33550397	200
ENSMUSG00000017132	protein_coding	Cyth1	ENSMUST00000151165	protein_coding		11	-1	118212742	363
ENSMUSG00000086025	lincRNA	4933406G16Rik	ENSMUST00000144854	lincRNA		11	1	19065276	1415
ENSMUSG00000039114	protein_coding	Nrn1	ENSMUST00000224960	protein_coding		13	-1	36735131	559
ENSMUSG00000079442	protein_coding	St6galnac4	ENSMUST00000179989	protein_coding	principal1	2	1	32587625	2826
ENSMUSG00000094140	protein_coding	Olfr1512	ENSMUST00000071221	protein_coding	principal1	14	-1	52373051	942
ENSMUSG00000114708	antisense	Gm30177	ENSMUST00000223623	antisense		13	1	36727258	579
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000021181	protein_coding		11	-1	70237914	779
ENSMUSG00000101701	antisense	4930521E06Rik	ENSMUST00000186732	antisense		1	-1	44744949	905
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000106857	protein_coding	alternative2	4	1	103119286	4752
ENSMUSG00000116689	lincRNA	4930405D01Rik	ENSMUST00000231992	lincRNA		16	1	52829123	1015
ENSMUSG00000114581	processed_pseudogene	Gm8277	ENSMUST00000223824	processed_pseudogene		13	-1	36559065	600
ENSMUSG00000089877	processed_pseudogene	Gm16102	ENSMUST00000160955	processed_pseudogene		1	1	44644279	420
ENSMUSG00000116689	lincRNA	4930405D01Rik	ENSMUST00000231678	lincRNA		16	1	52829130	685
ENSMUSG00000055541	protein_coding	Lair1	ENSMUST00000068865	protein_coding		7	-1	4063179	6828
ENSMUSG00000017132	protein_coding	Cyth1	ENSMUST00000131115	processed_transcript		11	-1	118219025	355
ENSMUSG00000031925	protein_coding	Maml2	ENSMUST00000159294	protein_coding	principal1	9	1	13297957	6404
ENSMUSG00000116977	processed_pseudogene	Gm49637	ENSMUST00000232102	processed_pseudogene		16	-1	53479684	403
ENSMUSG00000108004	TEC	Gm44080	ENSMUST00000204451	TEC		6	1	53667770	2214
ENSMUSG00000017132	protein_coding	Cyth1	ENSMUST00000141243	processed_transcript		11	-1	118226979	545
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000151588	retained_intron		4	1	103119390	2320
ENSMUSG00000053979	lincRNA	A730045E13Rik	ENSMUST00000066740	lincRNA		8	1	24173904	854
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000124348	retained_intron		4	1	103119410	1918
ENSMUSG00000027107	protein_coding	Chrna1	ENSMUST00000028515	protein_coding	principal1	2	-1	73580338	4386
ENSMUSG00000109419	lincRNA	Gm45163	ENSMUST00000207606	lincRNA		8	1	24220510	3987
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000106855	protein_coding	alternative2	4	1	103143057	1079
ENSMUSG00000118240	processed_pseudogene	Gm1859	ENSMUST00000235759	processed_pseudogene		18	-1	53221886	495
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000112173	protein_coding	principal1	6	-1	128143563	3819
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000128536	processed_transcript		4	1	103158586	1637
ENSMUSG00000081924	processed_pseudogene	Gm11191	ENSMUST00000117231	processed_pseudogene		11	1	77747041	610
ENSMUSG00000028522	protein_coding	Mier1	ENSMUST00000030247	protein_coding	principal3	4	1	103115560	4703
ENSMUSG00000031925	protein_coding	Maml2	ENSMUST00000177755	protein_coding		9	1	13662460	2264
ENSMUSG00000109299	lincRNA	Gm45164	ENSMUST00000207438	lincRNA		8	-1	24359436	896
ENSMUSG00000080744	processed_pseudogene	Gm12710	ENSMUST00000119011	processed_pseudogene		4	1	103103527	216
ENSMUSG00000106093	antisense	Gm42722	ENSMUST00000198855	antisense		3	1	106001561	940
ENSMUSG00000031925	protein_coding	Maml2	ENSMUST00000034401	protein_coding		9	1	13621646	2098
ENSMUSG00000109141	lincRNA	Gm30692	ENSMUST00000208709	lincRNA		8	1	24412179	801
ENSMUSG00000111212	TEC	Gm47087	ENSMUST00000213137	TEC		9	1	13308214	4233
ENSMUSG00000031802	TEC	Phxr4	ENSMUST00000216590	TEC		9	1	13431361	1391
ENSMUSG00000031802	TEC	Phxr4	ENSMUST00000071254	TEC		9	1	13431361	1376
ENSMUSG00000111223	TEC	Gm47089	ENSMUST00000213741	TEC		9	1	13519936	166
ENSMUSG00000040459	protein_coding	Arglu1	ENSMUST00000048545	protein_coding	principal1	8	-1	8690521	3197
ENSMUSG00000094724	protein_coding	Rnaset2b	ENSMUST00000232304	protein_coding		17	1	6978446	905
ENSMUSG00000074506	processed_pseudogene	Gm10705	ENSMUST00000098980	processed_pseudogene		3	-1	87208005	461
ENSMUSG00000056313	protein_coding	Tcim	ENSMUST00000052622	protein_coding	principal1	8	-1	24438984	1805
ENSMUSG00000074677	protein_coding	Sirpb1c	ENSMUST00000148194	protein_coding		3	-1	15838643	892
ENSMUSG00000040459	protein_coding	Arglu1	ENSMUST00000208252	retained_intron		8	-1	8690104	3559
ENSMUSG00000055541	protein_coding	Lair1	ENSMUST00000086401	protein_coding	principal3	7	-1	4063174	2496
ENSMUSG00000030706	protein_coding	Mrpl48	ENSMUST00000150042	protein_coding	principal1	7	-1	100583102	4285
ENSMUSG00000040459	protein_coding	Arglu1	ENSMUST00000207817	nonsense_mediated_decay		8	-1	8690311	970
ENSMUSG00000027796	protein_coding	Smad9	ENSMUST00000029371	protein_coding	principal1	3	1	54755582	5368
ENSMUSG00000097654	antisense	Gm26714	ENSMUST00000181338	antisense		8	1	24422404	1655
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000108578	protein_coding	alternative1	11	-1	70237914	880
ENSMUSG00000040459	protein_coding	Arglu1	ENSMUST00000207070	processed_transcript		8	-1	8682263	525
ENSMUSG00000022347	protein_coding	A1bg	ENSMUST00000228881	processed_transcript		15	-1	60919263	549
ENSMUSG00000000942	protein_coding	Hoxa4	ENSMUST00000101395	protein_coding	principal1	6	-1	52191753	1594
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000102569	protein_coding	principal3	11	-1	70237914	778
ENSMUSG00000102585	TEC	Gm37439	ENSMUST00000193150	TEC		11	-1	19117434	856
ENSMUSG00000036172	protein_coding	Cd200r3	ENSMUST00000114613	protein_coding	alternative2	16	1	44943678	950
ENSMUSG00000116629	processed_pseudogene	Gm49638	ENSMUST00000231266	processed_pseudogene		16	-1	53620067	539
ENSMUSG00000036172	protein_coding	Cd200r3	ENSMUST00000114612	protein_coding		16	1	44943678	731
ENSMUSG00000035126	protein_coding	Wdr78	ENSMUST00000138960	retained_intron		4	-1	103073002	2546
ENSMUSG00000116912	processed_pseudogene	Gm5487	ENSMUST00000232039	processed_pseudogene		16	1	53983928	2157
ENSMUSG00000036172	protein_coding	Cd200r3	ENSMUST00000077178	protein_coding		16	1	44943678	767
ENSMUSG00000006740	protein_coding	Kif5b	ENSMUST00000025083	protein_coding	principal1	18	-1	6241523	6032
ENSMUSG00000036172	protein_coding	Cd200r3	ENSMUST00000048479	protein_coding	alternative2	16	1	44943678	986
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000108577	protein_coding		11	-1	70237902	659
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000205222	retained_intron		6	1	53287270	2895
ENSMUSG00000020401	protein_coding	Fam71b	ENSMUST00000063166	protein_coding	principal1	11	1	46404730	2185
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000100950	protein_coding		11	-1	70237678	545
ENSMUSG00000017132	protein_coding	Cyth1	ENSMUST00000106302	protein_coding	principal4	11	-1	118212742	3119
ENSMUSG00000036172	protein_coding	Cd200r3	ENSMUST00000114611	protein_coding	principal4	16	1	44943678	1407
ENSMUSG00000020401	protein_coding	Fam71b	ENSMUST00000139280	processed_transcript		11	1	46396559	429
ENSMUSG00000070047	protein_coding	Fat1	ENSMUST00000191428	protein_coding	principal1	8	1	44935447	14814
ENSMUSG00000017132	protein_coding	Cyth1	ENSMUST00000106305	protein_coding	alternative1	11	-1	118248592	3179
ENSMUSG00000058291	protein_coding	Zfp68	ENSMUST00000110905	protein_coding	principal1	5	-1	138619761	4749
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000148878	processed_transcript		11	-1	70237489	516
ENSMUSG00000006740	protein_coding	Kif5b	ENSMUST00000168031	retained_intron		18	-1	6214540	1959
ENSMUSG00000021384	protein_coding	Susd3	ENSMUST00000058196	protein_coding	principal3	13	-1	49248294	1418
ENSMUSG00000028109	protein_coding	Hormad1	ENSMUST00000090797	protein_coding	principal3	3	1	95559677	1511
ENSMUSG00000094724	protein_coding	Rnaset2b	ENSMUST00000089119	protein_coding	principal1	17	1	6978595	1783
ENSMUSG00000022347	protein_coding	A1bg	ENSMUST00000096418	protein_coding	principal1	15	-1	60921266	1821
ENSMUSG00000021384	protein_coding	Susd3	ENSMUST00000021816	protein_coding	alternative2	13	-1	49248706	1317
ENSMUSG00000038253	protein_coding	Hoxa5	ENSMUST00000048794	protein_coding	principal1	6	-1	52204587	1877
ENSMUSG00000036172	protein_coding	Cd200r3	ENSMUST00000164007	protein_coding	alternative2	16	1	44943692	1484
ENSMUSG00000118406	lincRNA	Terc	ENSMUST00000238714	lincRNA		3	-1	96414833	397
ENSMUSG00000095836	processed_pseudogene	Gm21960	ENSMUST00000181924	processed_pseudogene		3	-1	96413361	452
ENSMUSG00000070047	protein_coding	Fat1	ENSMUST00000189017	protein_coding		8	1	44950208	14651
ENSMUSG00000021384	protein_coding	Susd3	ENSMUST00000119721	protein_coding	alternative2	13	-1	49248154	1249
ENSMUSG00000006740	protein_coding	Kif5b	ENSMUST00000164426	retained_intron		18	-1	6224029	1799
ENSMUSG00000031712	protein_coding	Il15	ENSMUST00000209363	protein_coding	principal1	8	-1	82402570	1251
ENSMUSG00000055541	protein_coding	Lair1	ENSMUST00000136616	nonsense_mediated_decay		7	-1	4063161	1633
ENSMUSG00000021384	protein_coding	Susd3	ENSMUST00000135784	protein_coding		13	-1	49248663	611
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000138658	processed_transcript		11	-1	70237763	516
ENSMUSG00000070047	protein_coding	Fat1	ENSMUST00000215588	protein_coding		8	1	44950214	13938
ENSMUSG00000028109	protein_coding	Hormad1	ENSMUST00000171191	protein_coding	principal3	3	1	95559678	1437
ENSMUSG00000006740	protein_coding	Kif5b	ENSMUST00000163210	protein_coding		18	-1	6241470	2006
ENSMUSG00000021384	protein_coding	Susd3	ENSMUST00000131880	processed_transcript		13	-1	49242900	333
ENSMUSG00000094724	protein_coding	Rnaset2b	ENSMUST00000179728	protein_coding	principal1	17	1	6978907	2448
ENSMUSG00000006740	protein_coding	Kif5b	ENSMUST00000166249	retained_intron		18	-1	6223038	456
ENSMUSG00000036172	protein_coding	Cd200r3	ENSMUST00000171779	protein_coding		16	1	44943706	1223
ENSMUSG00000021384	protein_coding	Susd3	ENSMUST00000141408	processed_transcript		13	-1	49240618	502
ENSMUSG00000006740	protein_coding	Kif5b	ENSMUST00000234166	retained_intron		18	-1	6241136	829
ENSMUSG00000028109	protein_coding	Hormad1	ENSMUST00000029754	protein_coding	alternative2	3	1	95559678	1385
ENSMUSG00000074677	protein_coding	Sirpb1c	ENSMUST00000108354	protein_coding	alternative2	3	-1	15848419	1275
ENSMUSG00000055541	protein_coding	Lair1	ENSMUST00000149395	nonsense_mediated_decay		7	-1	4063139	1304
ENSMUSG00000113526	lincRNA	Gm47453	ENSMUST00000220843	lincRNA		12	-1	68067037	769
ENSMUSG00000022347	protein_coding	A1bg	ENSMUST00000228632	protein_coding		15	-1	60923012	669
ENSMUSG00000028109	protein_coding	Hormad1	ENSMUST00000107154	protein_coding	principal3	3	1	95559678	1444
ENSMUSG00000115809	processed_pseudogene	Gm48951	ENSMUST00000226169	processed_pseudogene		15	-1	60938636	290
ENSMUSG00000113674	processed_pseudogene	Hspe1-ps1	ENSMUST00000222955	processed_pseudogene		12	1	68090407	330
ENSMUSG00000006740	protein_coding	Kif5b	ENSMUST00000170959	processed_transcript		18	-1	6242174	572
ENSMUSG00000055541	protein_coding	Lair1	ENSMUST00000206445	processed_transcript		7	-1	4027048	960
ENSMUSG00000070047	protein_coding	Fat1	ENSMUST00000186342	nonsense_mediated_decay		8	1	45044241	739
ENSMUSG00000094724	protein_coding	Rnaset2b	ENSMUST00000232106	retained_intron		17	1	6978928	1399
ENSMUSG00000031712	protein_coding	Il15	ENSMUST00000209573	protein_coding	principal1	8	-1	82401833	1164
ENSMUSG00000113655	TEC	Gm47454	ENSMUST00000221702	TEC		12	1	68332622	1209
ENSMUSG00000055541	protein_coding	Lair1	ENSMUST00000131126	nonsense_mediated_decay		7	-1	4063116	1045
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000112171	protein_coding	principal1	6	-1	128136709	2584
ENSMUSG00000070047	protein_coding	Fat1	ENSMUST00000189367	retained_intron		8	1	45045135	693
ENSMUSG00000094724	protein_coding	Rnaset2b	ENSMUST00000232245	protein_coding		17	1	6979008	631
ENSMUSG00000070047	protein_coding	Fat1	ENSMUST00000098796	protein_coding	principal1	8	1	44950208	14627
ENSMUSG00000100896	lincRNA	Gm28217	ENSMUST00000188613	lincRNA		Y	-1	30311114	648
ENSMUSG00000014704	protein_coding	Hoxa2	ENSMUST00000014848	protein_coding	principal1	6	-1	52164831	1775
ENSMUSG00000094724	protein_coding	Rnaset2b	ENSMUST00000232029	processed_transcript		17	1	6990656	571
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000108576	protein_coding	alternative1	11	-1	70237804	576
ENSMUSG00000036172	protein_coding	Cd200r3	ENSMUST00000114622	protein_coding		16	1	44943742	1339
ENSMUSG00000031712	protein_coding	Il15	ENSMUST00000034148	protein_coding	principal1	8	-1	82403222	1908
ENSMUSG00000113867	lincRNA	Gm47456	ENSMUST00000220867	lincRNA		12	-1	68445833	549
ENSMUSG00000058291	protein_coding	Zfp68	ENSMUST00000085852	protein_coding		5	-1	138619758	3318
ENSMUSG00000113161	TEC	Gm47457	ENSMUST00000220950	TEC		12	-1	68440282	4475
ENSMUSG00000087524	antisense	Gm14285	ENSMUST00000146049	antisense		2	1	131561614	380
ENSMUSG00000028476	protein_coding	Reck	ENSMUST00000030198	protein_coding	principal1	4	1	43875530	4433
ENSMUSG00000115231	antisense	4930402D18Rik	ENSMUST00000228929	antisense		15	1	60912974	1549
ENSMUSG00000097491	antisense	Gm2366	ENSMUST00000180753	antisense		8	-1	45022385	3982
ENSMUSG00000113561	processed_pseudogene	Gm19176	ENSMUST00000222149	processed_pseudogene		12	-1	68501206	1831
ENSMUSG00000027737	protein_coding	Slc7a11	ENSMUST00000194462	protein_coding		3	-1	50443614	2419
ENSMUSG00000036172	protein_coding	Cd200r3	ENSMUST00000166731	protein_coding	alternative2	16	1	44943749	3876
ENSMUSG00000101298	protein_coding	Gm28308	ENSMUST00000128102	protein_coding	principal1	6	-1	52213339	752
ENSMUSG00000030706	protein_coding	Mrpl48	ENSMUST00000146003	protein_coding		7	-1	100608301	1625
ENSMUSG00000027082	protein_coding	Tfpi	ENSMUST00000111718	protein_coding	principal2	2	-1	84475280	2027
ENSMUSG00000058291	protein_coding	Zfp68	ENSMUST00000197654	processed_transcript		5	-1	138607057	690
ENSMUSG00000030431	protein_coding	Tmem238	ENSMUST00000168578	protein_coding	principal1	7	-1	4789656	1375
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000032503	protein_coding	principal1	6	-1	128143560	1405
ENSMUSG00000036172	protein_coding	Cd200r3	ENSMUST00000163358	retained_intron		16	1	44965254	1415
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000021180	nonsense_mediated_decay		11	-1	70237861	517
ENSMUSG00000024382	protein_coding	Ercc3	ENSMUST00000025241	protein_coding	principal1	18	1	32240300	2708
ENSMUSG00000030706	protein_coding	Mrpl48	ENSMUST00000107053	nonsense_mediated_decay		7	-1	100574514	834
ENSMUSG00000058291	protein_coding	Zfp68	ENSMUST00000063262	protein_coding	principal1	5	-1	138619740	2254
ENSMUSG00000027335	protein_coding	Adra1d	ENSMUST00000103184	protein_coding	principal1	2	-1	131562283	1899
ENSMUSG00000087626	antisense	Gm15050	ENSMUST00000133723	antisense		6	1	52172881	552
ENSMUSG00000030706	protein_coding	Mrpl48	ENSMUST00000137777	protein_coding		7	-1	100591426	713
ENSMUSG00000030431	protein_coding	Tmem238	ENSMUST00000206315	nonsense_mediated_decay		7	-1	4789073	241
ENSMUSG00000020831	protein_coding	0610010K14Rik	ENSMUST00000150504	retained_intron		11	-1	70237912	749
ENSMUSG00000027082	protein_coding	Tfpi	ENSMUST00000090732	protein_coding		2	-1	84476775	3576
ENSMUSG00000028476	protein_coding	Reck	ENSMUST00000128463	processed_transcript		4	1	43875530	4549
ENSMUSG00000030706	protein_coding	Mrpl48	ENSMUST00000132888	protein_coding		7	-1	100583110	639
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000202141	retained_intron		6	-1	127966817	388
ENSMUSG00000027082	protein_coding	Tfpi	ENSMUST00000111714	protein_coding		2	-1	84476763	3614
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000184651	nonsense_mediated_decay		3	-1	89349982	3914
ENSMUSG00000058291	protein_coding	Zfp68	ENSMUST00000129832	protein_coding		5	-1	138619653	402
ENSMUSG00000028476	protein_coding	Reck	ENSMUST00000130415	processed_transcript		4	1	43940398	352
ENSMUSG00000010136	protein_coding	Pifo	ENSMUST00000010280	protein_coding	principal4	3	-1	106014646	956
ENSMUSG00000021911	protein_coding	Parg	ENSMUST00000163350	protein_coding	alternative2	14	1	32201949	3374
ENSMUSG00000074677	protein_coding	Sirpb1c	ENSMUST00000108352	protein_coding	alternative2	3	-1	15848447	1436
ENSMUSG00000058291	protein_coding	Zfp68	ENSMUST00000199066	retained_intron		5	-1	138619738	3552
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000123786	protein_coding		6	-1	128034592	880
ENSMUSG00000030706	protein_coding	Mrpl48	ENSMUST00000138448	protein_coding		7	-1	100607994	865
ENSMUSG00000046317	protein_coding	BC107364	ENSMUST00000093126	protein_coding	principal4	3	-1	96452306	1159
ENSMUSG00000079165	protein_coding	Sap25	ENSMUST00000177466	protein_coding	alternative2	5	1	137641334	1005
ENSMUSG00000085482	antisense	A230083N12Rik	ENSMUST00000126646	antisense		4	-1	74251714	572
ENSMUSG00000024535	protein_coding	Snx24	ENSMUST00000165032	protein_coding	principal1	18	1	53245662	1977
ENSMUSG00000102758	protein_coding	Naaladl2	ENSMUST00000203414	protein_coding	principal1	3	-1	24783622	9330
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000202372	protein_coding		6	-1	128035005	748
ENSMUSG00000030706	protein_coding	Mrpl48	ENSMUST00000152876	protein_coding		7	-1	100583097	508
ENSMUSG00000027082	protein_coding	Tfpi	ENSMUST00000111711	protein_coding		2	-1	84476748	3968
ENSMUSG00000031712	protein_coding	Il15	ENSMUST00000211565	nonsense_mediated_decay		8	-1	82345683	766
ENSMUSG00000027082	protein_coding	Tfpi	ENSMUST00000111722	protein_coding	alternative2	2	-1	84473784	1232
ENSMUSG00000030706	protein_coding	Mrpl48	ENSMUST00000208916	retained_intron		7	-1	100583075	2144
ENSMUSG00000055541	protein_coding	Lair1	ENSMUST00000108600	protein_coding	alternative2	7	-1	4063141	742
ENSMUSG00000027737	protein_coding	Slc7a11	ENSMUST00000029297	protein_coding	principal1	3	-1	50443611	9223
ENSMUSG00000046317	protein_coding	BC107364	ENSMUST00000098841	protein_coding	alternative2	3	-1	96452306	1065
ENSMUSG00000074677	protein_coding	Sirpb1c	ENSMUST00000050623	protein_coding	principal2	3	-1	15848528	1499
ENSMUSG00000043219	protein_coding	Hoxa6	ENSMUST00000062829	protein_coding	principal1	6	-1	52208722	874
ENSMUSG00000027082	protein_coding	Tfpi	ENSMUST00000150261	protein_coding		2	-1	84458110	3804
ENSMUSG00000030706	protein_coding	Mrpl48	ENSMUST00000127253	processed_transcript		7	-1	100607638	706
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000154375	protein_coding		6	-1	128143560	647
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000107448	protein_coding	alternative2	3	-1	89349989	2893
ENSMUSG00000030706	protein_coding	Mrpl48	ENSMUST00000064334	protein_coding		7	-1	100547620	1865
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000146268	protein_coding		6	-1	128140746	541
ENSMUSG00000031712	protein_coding	Il15	ENSMUST00000209687	processed_transcript		8	-1	82344473	430
ENSMUSG00000027082	protein_coding	Tfpi	ENSMUST00000125677	processed_transcript		2	-1	84434595	679
ENSMUSG00000024535	protein_coding	Snx24	ENSMUST00000236830	processed_transcript		18	1	53245728	362
ENSMUSG00000055541	protein_coding	Lair1	ENSMUST00000205296	protein_coding		7	-1	4063141	412
ENSMUSG00000082210	processed_pseudogene	Gm14382	ENSMUST00000117374	processed_pseudogene		7	1	100624518	437
ENSMUSG00000104642	processed_pseudogene	Gm9207	ENSMUST00000198773	processed_pseudogene		3	-1	96455949	1115
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000113504	protein_coding	principal3	19	1	6334979	2663
ENSMUSG00000031712	protein_coding	Il15	ENSMUST00000211722	processed_transcript		8	-1	82344473	433
ENSMUSG00000024382	protein_coding	Ercc3	ENSMUST00000142213	retained_intron		18	1	32240354	2781
ENSMUSG00000027737	protein_coding	Slc7a11	ENSMUST00000192564	processed_transcript		3	-1	50370799	481
ENSMUSG00000010136	protein_coding	Pifo	ENSMUST00000066319	protein_coding	alternative2	3	-1	106001497	899
ENSMUSG00000002129	protein_coding	Sf3a1	ENSMUST00000133095	retained_intron		11	1	4177548	846
ENSMUSG00000027082	protein_coding	Tfpi	ENSMUST00000144775	processed_transcript		2	-1	84473799	425
ENSMUSG00000024535	protein_coding	Snx24	ENSMUST00000235675	processed_transcript		18	1	53245759	714
ENSMUSG00000074677	protein_coding	Sirpb1c	ENSMUST00000108350	protein_coding	alternative2	3	-1	15848491	2489
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000145940	protein_coding		6	-1	128143553	332
ENSMUSG00000031712	protein_coding	Il15	ENSMUST00000210094	protein_coding		8	-1	82402366	430
ENSMUSG00000079165	protein_coding	Sap25	ENSMUST00000166099	protein_coding	principal2	5	1	137641437	1101
ENSMUSG00000024382	protein_coding	Ercc3	ENSMUST00000129023	processed_transcript		18	1	32257269	695
ENSMUSG00000055541	protein_coding	Lair1	ENSMUST00000119711	processed_transcript		7	-1	4063148	573
ENSMUSG00000085696	antisense	Hoxaas3	ENSMUST00000139055	antisense		6	1	52175217	575
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000127105	protein_coding		6	-1	128124316	388
ENSMUSG00000102758	protein_coding	Naaladl2	ENSMUST00000192246	processed_transcript		3	-1	23939477	1432
ENSMUSG00000104592	sense_intronic	Gm42721	ENSMUST00000197165	sense_intronic		3	-1	106009387	1523
ENSMUSG00000031712	protein_coding	Il15	ENSMUST00000211282	processed_transcript		8	-1	82402493	258
ENSMUSG00000086204	lincRNA	Gm15668	ENSMUST00000140506	lincRNA		1	1	67249200	678
ENSMUSG00000106429	lincRNA	Gm10685	ENSMUST00000196120	lincRNA		3	1	96458209	433
ENSMUSG00000074677	protein_coding	Sirpb1c	ENSMUST00000108349	protein_coding	alternative2	3	-1	15848443	1994
ENSMUSG00000024535	protein_coding	Snx24	ENSMUST00000025417	protein_coding	principal1	18	1	53245769	994
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000029676	protein_coding	principal4	3	-1	89349996	2975
ENSMUSG00000031712	protein_coding	Il15	ENSMUST00000210885	processed_transcript		8	-1	82398627	234
ENSMUSG00000030352	protein_coding	Tspan9	ENSMUST00000127075	processed_transcript		6	-1	128143594	246
ENSMUSG00000102758	protein_coding	Naaladl2	ENSMUST00000203997	processed_transcript		3	-1	23972185	516
ENSMUSG00000002129	protein_coding	Sf3a1	ENSMUST00000129583	processed_transcript		11	1	4160355	424
ENSMUSG00000047417	protein_coding	Rexo1	ENSMUST00000057910	protein_coding	principal2	10	-1	80561560	5250
ENSMUSG00000082473	processed_pseudogene	Kif22-ps	ENSMUST00000119302	processed_pseudogene		1	1	67585053	1984
ENSMUSG00000102878	IG_V_pseudogene	Ighv2-8	ENSMUST00000193935	IG_V_pseudogene		12	-1	113877794	262
ENSMUSG00000079165	protein_coding	Sap25	ENSMUST00000177354	retained_intron		5	1	137641495	847
ENSMUSG00000074677	protein_coding	Sirpb1c	ENSMUST00000124067	processed_transcript		3	-1	15848454	588
ENSMUSG00000027737	protein_coding	Slc7a11	ENSMUST00000142932	retained_intron		3	-1	50443614	3162
ENSMUSG00000074677	protein_coding	Sirpb1c	ENSMUST00000191802	retained_intron		3	-1	15838617	844
ENSMUSG00000027082	protein_coding	Tfpi	ENSMUST00000111717	protein_coding		2	-1	84473803	2962
ENSMUSG00000031712	protein_coding	Il15	ENSMUST00000210472	processed_transcript		8	-1	82403209	618
ENSMUSG00000106641	TEC	Gm43534	ENSMUST00000197685	TEC		3	-1	96466924	2853
ENSMUSG00000102758	protein_coding	Naaladl2	ENSMUST00000204227	retained_intron		3	-1	25144261	1131
ENSMUSG00000040904	protein_coding	Gm21988	ENSMUST00000176116	nonsense_mediated_decay	alternative2	11	-1	70239830	1688
ENSMUSG00000027737	protein_coding	Slc7a11	ENSMUST00000193838	retained_intron		3	-1	50443605	2677
ENSMUSG00000085075	lincRNA	Gm15669	ENSMUST00000147834	lincRNA		1	1	67792481	526
ENSMUSG00000085696	antisense	Hoxaas3	ENSMUST00000136806	antisense		6	1	52175235	2207
ENSMUSG00000105009	processed_pseudogene	Gm42774	ENSMUST00000198854	processed_pseudogene		3	-1	25007705	283
ENSMUSG00000079165	protein_coding	Sap25	ENSMUST00000176256	retained_intron		5	1	137641944	414
ENSMUSG00000084333	processed_pseudogene	Gm11599	ENSMUST00000118720	processed_pseudogene		1	1	62660839	878
ENSMUSG00000103688	processed_pseudogene	Gm6321	ENSMUST00000194460	processed_pseudogene		3	-1	15892555	1090
ENSMUSG00000047417	protein_coding	Rexo1	ENSMUST00000182260	protein_coding		10	-1	80547921	2338
ENSMUSG00000102876	TEC	Gm37136	ENSMUST00000194368	TEC		3	1	25144068	194
ENSMUSG00000104395	TEC	Gm37957	ENSMUST00000192182	TEC		1	1	67903230	2303
ENSMUSG00000040904	protein_coding	Gm21988	ENSMUST00000176268	nonsense_mediated_decay	principal5	11	-1	70239803	1621
ENSMUSG00000057036	processed_pseudogene	Gm7536	ENSMUST00000077389	processed_pseudogene		3	1	24333068	444
ENSMUSG00000085696	antisense	Hoxaas3	ENSMUST00000131502	antisense		6	1	52201124	853
ENSMUSG00000079165	protein_coding	Sap25	ENSMUST00000176075	retained_intron		5	1	137642178	576
ENSMUSG00000027082	protein_coding	Tfpi	ENSMUST00000028487	protein_coding	principal2	2	-1	84474174	1492
ENSMUSG00000005611	protein_coding	Mrvi1	ENSMUST00000127935	protein_coding		7	-1	110926403	5241
ENSMUSG00000103769	processed_pseudogene	Gm7343	ENSMUST00000194510	processed_pseudogene		3	-1	15942833	1061
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000148068	processed_transcript		3	-1	89341157	554
ENSMUSG00000079165	protein_coding	Sap25	ENSMUST00000177038	retained_intron		5	1	137642349	551
ENSMUSG00000056445	processed_transcript	Hoxaas2	ENSMUST00000155922	antisense		6	1	52165674	1567
ENSMUSG00000083039	processed_pseudogene	Gm11606	ENSMUST00000120706	processed_pseudogene		1	-1	63358050	617
ENSMUSG00000047417	protein_coding	Rexo1	ENSMUST00000183233	protein_coding	alternative2	10	-1	80546802	1893
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000156250	processed_transcript		3	-1	89340440	418
ENSMUSG00000056445	processed_transcript	Hoxaas2	ENSMUST00000189230	retained_intron		6	1	52166518	3047
ENSMUSG00000047417	protein_coding	Rexo1	ENSMUST00000182604	protein_coding	alternative2	10	-1	80546802	1914
ENSMUSG00000056445	processed_transcript	Hoxaas2	ENSMUST00000114435	processed_transcript		6	1	52168510	1055
ENSMUSG00000055541	protein_coding	Lair1	ENSMUST00000086400	protein_coding	alternative2	7	-1	4063204	3461
ENSMUSG00000047417	protein_coding	Rexo1	ENSMUST00000183160	nonsense_mediated_decay		10	-1	80544313	741
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000107446	protein_coding		3	-1	89349959	1686
ENSMUSG00000015852	protein_coding	Fcrls	ENSMUST00000090986	protein_coding	principal1	3	-1	87263599	2273
ENSMUSG00000083378	processed_pseudogene	Gm13196	ENSMUST00000118297	processed_pseudogene		2	1	4700238	379
ENSMUSG00000107199	TEC	Gm42550	ENSMUST00000201553	TEC		5	1	117520699	960
ENSMUSG00000015852	protein_coding	Fcrls	ENSMUST00000146512	protein_coding		3	-1	87263738	690
ENSMUSG00000099766	processed_pseudogene	Gm28767	ENSMUST00000188601	processed_pseudogene		Y	1	5383039	114
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000079327	protein_coding	principal3	19	1	6335013	2639
ENSMUSG00000043873	protein_coding	Chil5	ENSMUST00000066537	protein_coding		3	-1	106024911	969
ENSMUSG00000099726	unprocessed_pseudogene	Gm29160	ENSMUST00000190094	unprocessed_pseudogene		Y	1	5391538	699
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000074582	protein_coding	alternative2	3	-1	89349975	2799
ENSMUSG00000101576	unprocessed_pseudogene	Gm20915	ENSMUST00000191575	unprocessed_pseudogene		Y	-1	5460208	663
ENSMUSG00000102115	unprocessed_pseudogene	Gm28766	ENSMUST00000191086	unprocessed_pseudogene		Y	1	5465722	234
ENSMUSG00000047417	protein_coding	Rexo1	ENSMUST00000183073	nonsense_mediated_decay		10	-1	80549462	889
ENSMUSG00000115332	lincRNA	Gm48952	ENSMUST00000227033	lincRNA		15	1	76083764	339
ENSMUSG00000102102	processed_pseudogene	Gm29159	ENSMUST00000187969	processed_pseudogene		Y	-1	5472868	379
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000139705	retained_intron		3	-1	89340352	507
ENSMUSG00000047417	protein_coding	Rexo1	ENSMUST00000183139	processed_transcript		10	-1	80549460	709
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000155868	retained_intron		3	-1	89340919	668
ENSMUSG00000099761	lincRNA	Gm29158	ENSMUST00000186883	lincRNA		Y	-1	5620317	1494
ENSMUSG00000079560	protein_coding	Hoxa3	ENSMUST00000114434	protein_coding	principal1	6	-1	52213115	2591
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000056391	protein_coding	principal3	19	1	6335039	2975
ENSMUSG00000063109	antisense	Dgkeos	ENSMUST00000123094	antisense		11	1	89066088	1943
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000144608	retained_intron		3	-1	89343679	758
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000113501	protein_coding		19	1	6335039	2508
ENSMUSG00000079560	protein_coding	Hoxa3	ENSMUST00000134831	protein_coding		6	-1	52183855	347
ENSMUSG00000061578	protein_coding	Ksr2	ENSMUST00000073347	retained_intron		5	1	117414000	2283
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000237909	protein_coding		19	1	6335040	383
ENSMUSG00000079560	protein_coding	Hoxa3	ENSMUST00000148446	processed_transcript		6	-1	52184874	1534
ENSMUSG00000063109	antisense	Dgkeos	ENSMUST00000146524	antisense		11	1	89066274	771
ENSMUSG00000079560	protein_coding	Hoxa3	ENSMUST00000142764	retained_intron		6	-1	52213336	2085
ENSMUSG00000063109	antisense	Dgkeos	ENSMUST00000139194	antisense		11	1	89066278	624
ENSMUSG00000063109	antisense	Dgkeos	ENSMUST00000178493	antisense		11	1	89064729	1902
ENSMUSG00000043873	protein_coding	Chil5	ENSMUST00000054973	nonsense_mediated_decay		3	-1	106024916	1052
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000156154	retained_intron		19	1	6335046	3002
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000113500	protein_coding	principal3	19	1	6335047	2742
ENSMUSG00000101451	antisense	Gm29430	ENSMUST00000191453	antisense		6	1	52183110	2015
ENSMUSG00000021911	protein_coding	Parg	ENSMUST00000022470	protein_coding	principal2	14	1	32201949	4413
ENSMUSG00000101451	antisense	Gm29430	ENSMUST00000191326	antisense		6	1	52183725	759
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000166909	protein_coding		19	1	6335064	295
ENSMUSG00000097464	TEC	Gm26736	ENSMUST00000180425	TEC		6	1	4946568	1236
ENSMUSG00000043873	protein_coding	Chil5	ENSMUST00000200146	protein_coding	principal1	3	-1	106032814	1296
ENSMUSG00000097385	TEC	Gm26814	ENSMUST00000181178	TEC		6	1	4942147	4149
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000232321	protein_coding		16	-1	32099740	818
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000134839	retained_intron		3	-1	89349974	3053
ENSMUSG00000030122	protein_coding	Ptms	ENSMUST00000032216	protein_coding	principal1	6	-1	124917946	1149
ENSMUSG00000073173	unprocessed_pseudogene	Gm10477	ENSMUST00000101552	unprocessed_pseudogene		X	1	56523582	205
ENSMUSG00000061578	protein_coding	Ksr2	ENSMUST00000180430	protein_coding	principal1	5	1	117414000	13125
ENSMUSG00000038236	protein_coding	Hoxa7	ENSMUST00000153280	nonsense_mediated_decay		6	-1	52220393	2031
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000155295	retained_intron		3	-1	89349960	1034
ENSMUSG00000028041	protein_coding	Adam15	ENSMUST00000134590	processed_transcript		3	-1	89349107	403
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000078137	protein_coding		19	1	6335111	2738
ENSMUSG00000021345	protein_coding	Prl8a6	ENSMUST00000080762	protein_coding	alternative2	13	-1	27438688	1020
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000151250	processed_transcript		16	-1	32088155	630
ENSMUSG00000097004	antisense	4731419I09Rik	ENSMUST00000180791	antisense		3	1	89337850	2820
ENSMUSG00000056870	protein_coding	Gulp1	ENSMUST00000074525	protein_coding	principal1	1	1	44551511	3138
ENSMUSG00000007039	protein_coding	Ddah2	ENSMUST00000007255	protein_coding	principal1	17	1	35059035	1342
ENSMUSG00000105749	processed_pseudogene	Gm9251	ENSMUST00000197202	processed_pseudogene		12	1	115773343	628
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000113503	protein_coding		19	1	6335461	1851
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000143011	processed_transcript		16	-1	32099704	675
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000170132	protein_coding		19	1	6336910	405
ENSMUSG00000081643	processed_pseudogene	Gm11605	ENSMUST00000120413	processed_pseudogene		1	-1	63365365	646
ENSMUSG00000028426	protein_coding	Rad23b	ENSMUST00000030134	protein_coding	principal1	4	1	55350043	3810
ENSMUSG00000021911	protein_coding	Parg	ENSMUST00000171279	protein_coding		14	1	32201971	804
ENSMUSG00000038236	protein_coding	Hoxa7	ENSMUST00000048715	protein_coding	principal1	6	-1	52217505	2009
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000238038	retained_intron		19	1	6338915	732
ENSMUSG00000007039	protein_coding	Ddah2	ENSMUST00000174493	protein_coding		17	1	35059101	1254
ENSMUSG00000056870	protein_coding	Gulp1	ENSMUST00000160854	protein_coding		1	1	44551693	1399
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000043716	protein_coding	principal1	12	-1	110889145	2029
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000170292	nonsense_mediated_decay		19	1	6339847	664
ENSMUSG00000021911	protein_coding	Parg	ENSMUST00000170840	protein_coding	alternative2	14	1	32201971	2894
ENSMUSG00000014550	protein_coding	Rbsn	ENSMUST00000014694	protein_coding	principal1	6	-1	92214925	5334
ENSMUSG00000062054	protein_coding	Iah1	ENSMUST00000076813	protein_coding	principal1	12	1	21316389	1141
ENSMUSG00000030122	protein_coding	Ptms	ENSMUST00000203422	processed_transcript		6	-1	124914674	585
ENSMUSG00000028426	protein_coding	Rad23b	ENSMUST00000127266	processed_transcript		4	1	55350050	2176
ENSMUSG00000021911	protein_coding	Parg	ENSMUST00000170129	nonsense_mediated_decay		14	1	32202032	2786
ENSMUSG00000007039	protein_coding	Ddah2	ENSMUST00000173520	protein_coding		17	1	35059816	682
ENSMUSG00000106599	IG_V_pseudogene	Ighv1-73	ENSMUST00000197435	IG_V_pseudogene		12	-1	115791027	352
ENSMUSG00000014550	protein_coding	Rbsn	ENSMUST00000124635	protein_coding		6	-1	92199725	810
ENSMUSG00000007039	protein_coding	Ddah2	ENSMUST00000173562	retained_intron		17	1	35060893	382
ENSMUSG00000021911	protein_coding	Parg	ENSMUST00000170637	processed_transcript		14	1	32202436	590
ENSMUSG00000030122	protein_coding	Ptms	ENSMUST00000204671	processed_transcript		6	-1	124920103	744
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000220607	protein_coding		12	-1	110889097	1579
ENSMUSG00000038236	protein_coding	Hoxa7	ENSMUST00000134367	protein_coding		6	-1	52218711	807
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000203528	protein_coding	principal2	6	1	53287270	7917
ENSMUSG00000028426	protein_coding	Rad23b	ENSMUST00000156263	processed_transcript		4	1	55350090	776
ENSMUSG00000062054	protein_coding	Iah1	ENSMUST00000221693	protein_coding		12	1	21316403	585
ENSMUSG00000056870	protein_coding	Gulp1	ENSMUST00000159555	nonsense_mediated_decay		1	1	44551693	2882
ENSMUSG00000030122	protein_coding	Ptms	ENSMUST00000181150	retained_intron		6	-1	124915224	629
ENSMUSG00000021911	protein_coding	Parg	ENSMUST00000167699	nonsense_mediated_decay		14	1	32214399	428
ENSMUSG00000005611	protein_coding	Mrvi1	ENSMUST00000005751	protein_coding	principal3	7	-1	110982461	6198
ENSMUSG00000028426	protein_coding	Rad23b	ENSMUST00000148719	processed_transcript		4	1	55350052	663
ENSMUSG00000030122	protein_coding	Ptms	ENSMUST00000134916	processed_transcript		6	-1	124915529	315
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000221182	protein_coding		12	-1	110889097	774
ENSMUSG00000094124	IG_V_gene	Ighv1-74	ENSMUST00000196587	IG_V_gene	principal5	12	-1	115803080	351
ENSMUSG00000014550	protein_coding	Rbsn	ENSMUST00000141332	processed_transcript		6	-1	92201628	741
ENSMUSG00000038236	protein_coding	Hoxa7	ENSMUST00000150041	protein_coding		6	-1	52221854	598
ENSMUSG00000021911	protein_coding	Parg	ENSMUST00000163957	processed_transcript		14	1	32242168	496
ENSMUSG00000062054	protein_coding	Iah1	ENSMUST00000223345	protein_coding		12	1	21316414	1890
ENSMUSG00000014550	protein_coding	Rbsn	ENSMUST00000204858	retained_intron		6	-1	92194128	3383
ENSMUSG00000094124	IG_V_gene	Ighv1-74	ENSMUST00000103543	IG_V_gene	alternative2	12	-1	115803080	348
ENSMUSG00000109913	unitary_pseudogene	Gm30694	ENSMUST00000209278	unitary_pseudogene		1	1	157118948	1230
ENSMUSG00000056870	protein_coding	Gulp1	ENSMUST00000161793	processed_transcript		1	1	44551727	539
ENSMUSG00000024947	protein_coding	Men1	ENSMUST00000113502	protein_coding	alternative1	19	1	6334979	2652
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000025394	protein_coding	principal1	18	1	65800515	860
ENSMUSG00000038236	protein_coding	Hoxa7	ENSMUST00000140316	protein_coding		6	-1	52217452	643
ENSMUSG00000021911	protein_coding	Parg	ENSMUST00000171871	processed_transcript		14	1	32275707	587
ENSMUSG00000055818	antisense	A230083G16Rik	ENSMUST00000069553	antisense		6	1	124916863	991
ENSMUSG00000014550	protein_coding	Rbsn	ENSMUST00000203516	protein_coding		6	-1	92214849	368
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000128278	processed_transcript		10	-1	81597590	1855
ENSMUSG00000062054	protein_coding	Iah1	ENSMUST00000222344	protein_coding		12	1	21316436	491
ENSMUSG00000028040	protein_coding	Efna4	ENSMUST00000029674	protein_coding	principal1	3	-1	89338028	1599
ENSMUSG00000056468	TEC	5730596B20Rik	ENSMUST00000070587	TEC		6	1	52177498	3354
ENSMUSG00000091087	IG_V_pseudogene	Ighv8-14	ENSMUST00000196781	IG_V_pseudogene		12	-1	115808860	358
ENSMUSG00000056870	protein_coding	Gulp1	ENSMUST00000161066	protein_coding		1	1	44552597	341
ENSMUSG00000118126	lincRNA	Gm32341	ENSMUST00000235177	lincRNA		19	1	16871092	1168
ENSMUSG00000014550	protein_coding	Rbsn	ENSMUST00000138041	protein_coding		6	-1	92214569	639
ENSMUSG00000005611	protein_coding	Mrvi1	ENSMUST00000125758	protein_coding	alternative2	7	-1	110946187	5953
ENSMUSG00000118126	lincRNA	Gm32341	ENSMUST00000235214	lincRNA		19	1	16919333	626
ENSMUSG00000079330	protein_coding	Lemd1	ENSMUST00000188169	protein_coding	alternative2	1	1	132191431	2904
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000221102	protein_coding		12	-1	110889119	536
ENSMUSG00000096000	protein_coding	Olfr773	ENSMUST00000072976	protein_coding	principal1	10	-1	129187419	936
ENSMUSG00000118126	lincRNA	Gm32341	ENSMUST00000236072	lincRNA		19	1	16919333	741
ENSMUSG00000084414	processed_pseudogene	Gm11270	ENSMUST00000117685	processed_pseudogene		13	-1	21296718	471
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000221414	protein_coding		12	-1	110877344	501
ENSMUSG00000005611	protein_coding	Mrvi1	ENSMUST00000149923	processed_transcript		7	-1	110923703	585
ENSMUSG00000105669	processed_pseudogene	Gm18341	ENSMUST00000197538	processed_pseudogene		12	1	115814954	622
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000222457	protein_coding		12	-1	110889116	723
ENSMUSG00000056870	protein_coding	Gulp1	ENSMUST00000162600	protein_coding		1	1	44689144	2798
ENSMUSG00000056829	protein_coding	Foxb2	ENSMUST00000072915	protein_coding	principal1	19	-1	16873805	1487
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000205200	processed_transcript		6	1	53287286	614
ENSMUSG00000079330	protein_coding	Lemd1	ENSMUST00000112357	protein_coding	principal3	1	1	132191455	964
ENSMUSG00000102319	TEC	Gm37626	ENSMUST00000194332	TEC		1	1	44560885	4563
ENSMUSG00000021345	protein_coding	Prl8a6	ENSMUST00000018392	protein_coding	principal3	13	-1	27438635	900
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000204143	processed_transcript		6	1	53287295	3028
ENSMUSG00000104780	processed_pseudogene	Gm19843	ENSMUST00000198144	processed_pseudogene		12	1	115831276	772
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000223170	nonsense_mediated_decay		12	-1	110884060	513
ENSMUSG00000103071	TEC	Gm38110	ENSMUST00000194594	TEC		1	1	44756942	1551
ENSMUSG00000096229	protein_coding	Olfr774	ENSMUST00000203248	protein_coding	principal1	10	1	129236204	1429
ENSMUSG00000108820	TEC	Gm44620	ENSMUST00000209183	TEC		8	1	24447097	2887
ENSMUSG00000079330	protein_coding	Lemd1	ENSMUST00000189062	protein_coding		1	1	132200963	1585
ENSMUSG00000096229	protein_coding	Olfr774	ENSMUST00000097164	protein_coding	principal1	10	1	129238151	939
ENSMUSG00000098081	processed_pseudogene	Gm26913	ENSMUST00000182391	processed_pseudogene		13	-1	84690941	732
ENSMUSG00000096020	IG_V_gene	Ighv1-75	ENSMUST00000103544	IG_V_gene	principal1	12	-1	115834418	373
ENSMUSG00000079330	protein_coding	Lemd1	ENSMUST00000185223	protein_coding		1	1	132203852	458
ENSMUSG00000005611	protein_coding	Mrvi1	ENSMUST00000142368	processed_transcript		7	-1	110982058	917
ENSMUSG00000035126	protein_coding	Wdr78	ENSMUST00000116316	nonsense_mediated_decay		4	-1	103114224	3365
ENSMUSG00000114338	processed_pseudogene	Gm4059	ENSMUST00000225386	processed_pseudogene		13	-1	84974317	606
ENSMUSG00000041068	protein_coding	4930596D02Rik	ENSMUST00000043266	protein_coding	principal1	14	-1	35811978	1160
ENSMUSG00000097435	lincRNA	Gm26783	ENSMUST00000181197	lincRNA		1	-1	134646520	2377
ENSMUSG00000005611	protein_coding	Mrvi1	ENSMUST00000135590	retained_intron		7	-1	110926672	393
ENSMUSG00000109237	TEC	9130214F15Rik	ENSMUST00000208727	TEC		8	1	24506430	1653
ENSMUSG00000021345	protein_coding	Prl8a6	ENSMUST00000110355	protein_coding	alternative2	13	-1	27438638	843
ENSMUSG00000079330	protein_coding	Lemd1	ENSMUST00000185436	nonsense_mediated_decay		1	1	132226314	934
ENSMUSG00000114313	processed_pseudogene	Gm4066	ENSMUST00000224205	processed_pseudogene		13	-1	85025436	339
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000204861	processed_transcript		6	1	53287318	916
ENSMUSG00000114614	processed_pseudogene	Gm47745	ENSMUST00000224450	processed_pseudogene		13	1	85094335	553
ENSMUSG00000115375	processed_pseudogene	Gm49039	ENSMUST00000227206	processed_pseudogene		14	1	35820609	452
ENSMUSG00000079330	protein_coding	Lemd1	ENSMUST00000187339	nonsense_mediated_decay		1	1	132226343	659
ENSMUSG00000005611	protein_coding	Mrvi1	ENSMUST00000154466	protein_coding		7	-1	110982204	567
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000204748	processed_transcript		6	1	53287318	354
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000221901	processed_transcript		12	-1	110889133	744
ENSMUSG00000096220	protein_coding	Olfr775	ENSMUST00000214109	protein_coding	principal1	10	1	129248412	3598
ENSMUSG00000115274	processed_pseudogene	Gm49040	ENSMUST00000228746	processed_pseudogene		14	1	35980994	275
ENSMUSG00000026032	protein_coding	Ndufb3	ENSMUST00000027193	protein_coding	principal1	1	1	58586384	763
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000223407	retained_intron		12	-1	110889124	702
ENSMUSG00000079330	protein_coding	Lemd1	ENSMUST00000189086	retained_intron		1	1	132228184	825
ENSMUSG00000044807	protein_coding	Zfp354c	ENSMUST00000109135	protein_coding	principal1	11	-1	50827690	5325
ENSMUSG00000115347	processed_pseudogene	Gm8238	ENSMUST00000227992	processed_pseudogene		15	-1	13418856	435
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000220631	retained_intron		12	-1	110889133	1356
ENSMUSG00000096449	processed_pseudogene	Gm4076	ENSMUST00000179230	processed_pseudogene		13	-1	85127514	965
ENSMUSG00000096220	protein_coding	Olfr775	ENSMUST00000097163	protein_coding	principal1	10	1	129250536	939
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000221963	retained_intron		12	-1	110889131	633
ENSMUSG00000115481	processed_pseudogene	Gm4940	ENSMUST00000228091	processed_pseudogene		15	1	13452316	797
ENSMUSG00000079330	protein_coding	Lemd1	ENSMUST00000191418	protein_coding	alternative2	1	1	132228184	726
ENSMUSG00000114954	processed_pseudogene	Gm47746	ENSMUST00000224780	processed_pseudogene		13	1	85140720	383
ENSMUSG00000019054	protein_coding	Fis1	ENSMUST00000111094	protein_coding		5	1	136953275	948
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000230610	nonsense_mediated_decay		15	-1	75929136	1431
ENSMUSG00000100202	processed_pseudogene	Gm29389	ENSMUST00000191562	processed_pseudogene		1	-1	58625565	352
ENSMUSG00000115703	processed_pseudogene	Gm49112	ENSMUST00000227027	processed_pseudogene		15	1	13481349	289
ENSMUSG00000044807	protein_coding	Zfp354c	ENSMUST00000139465	processed_transcript		11	-1	50827686	426
ENSMUSG00000021276	protein_coding	Cinp	ENSMUST00000223079	nonsense_mediated_decay		12	-1	110889099	445
ENSMUSG00000095483	protein_coding	Olfr776	ENSMUST00000213512	protein_coding	principal1	10	1	129259127	3499
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000204245	retained_intron		6	1	53287318	2247
ENSMUSG00000115081	processed_pseudogene	Gm18714	ENSMUST00000228363	processed_pseudogene		15	-1	13714241	270
ENSMUSG00000118219	protein_coding	Gm29695	ENSMUST00000188175	protein_coding	principal1	1	1	132191457	5271
ENSMUSG00000113385	TEC	Gm48405	ENSMUST00000222666	TEC		12	-1	110888157	2223
ENSMUSG00000019054	protein_coding	Fis1	ENSMUST00000111097	protein_coding		5	1	136953406	601
ENSMUSG00000039364	protein_coding	Sectm1b	ENSMUST00000039309	protein_coding	principal1	11	-1	121063569	2287
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000203575	processed_transcript		6	1	53287318	4466
ENSMUSG00000044807	protein_coding	Zfp354c	ENSMUST00000136333	processed_transcript		11	-1	50827724	381
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000204136	processed_transcript		6	1	53287321	2803
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000211679	processed_transcript		6	1	53287328	1230
ENSMUSG00000095483	protein_coding	Olfr776	ENSMUST00000073704	protein_coding	principal1	10	1	129260963	939
ENSMUSG00000044807	protein_coding	Zfp354c	ENSMUST00000000632	protein_coding	principal1	11	-1	50826458	1683
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000203487	protein_coding	alternative1	6	1	53290423	2648
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000047450	protein_coding	principal2	6	1	53310871	2330
ENSMUSG00000114640	lincRNA	Gm48107	ENSMUST00000225467	lincRNA		13	-1	40754994	366
ENSMUSG00000114640	lincRNA	Gm48107	ENSMUST00000224849	lincRNA		13	-1	40754996	386
ENSMUSG00000039364	protein_coding	Sectm1b	ENSMUST00000081499	protein_coding	principal1	11	-1	121063545	1222
ENSMUSG00000020542	protein_coding	Myocd	ENSMUST00000102635	protein_coding	principal3	11	-1	65269941	4935
ENSMUSG00000000276	protein_coding	Dgke	ENSMUST00000107894	protein_coding	principal1	11	-1	89066850	8347
ENSMUSG00000039364	protein_coding	Sectm1b	ENSMUST00000130786	protein_coding		11	-1	121063455	887
ENSMUSG00000090475	processed_pseudogene	Gm6245	ENSMUST00000164699	processed_pseudogene		13	1	40778040	768
ENSMUSG00000062914	protein_coding	Olfr777	ENSMUST00000204573	protein_coding	principal1	10	-1	129271485	5407
ENSMUSG00000075590	protein_coding	Nrbp2	ENSMUST00000227605	nonsense_mediated_decay		15	-1	76091505	3220
ENSMUSG00000039364	protein_coding	Sectm1b	ENSMUST00000132117	retained_intron		11	-1	121063303	834
ENSMUSG00000114263	processed_pseudogene	Gm7201	ENSMUST00000225513	processed_pseudogene		13	-1	40838656	1099
ENSMUSG00000062914	protein_coding	Olfr777	ENSMUST00000080313	protein_coding	principal1	10	-1	129269321	936
ENSMUSG00000039364	protein_coding	Sectm1b	ENSMUST00000150577	processed_transcript		11	-1	121056628	222
ENSMUSG00000019054	protein_coding	Fis1	ENSMUST00000019198	protein_coding	principal1	5	1	136962077	786
ENSMUSG00000114133	protein_coding	Gm20075	ENSMUST00000220449	protein_coding	principal1	13	-1	96081376	2161
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000030902	protein_coding	principal3	4	-1	154636866	8598
ENSMUSG00000020542	protein_coding	Myocd	ENSMUST00000101042	protein_coding		11	-1	65218559	2585
ENSMUSG00000000276	protein_coding	Dgke	ENSMUST00000152772	nonsense_mediated_decay		11	-1	89060748	3562
ENSMUSG00000035126	protein_coding	Wdr78	ENSMUST00000106868	protein_coding	principal1	4	-1	103114555	4045
ENSMUSG00000039364	protein_coding	Sectm1b	ENSMUST00000170381	protein_coding	principal1	11	-1	121056363	1011
ENSMUSG00000024538	protein_coding	Ppic	ENSMUST00000025419	protein_coding	principal1	18	-1	53418115	1403
ENSMUSG00000020542	protein_coding	Myocd	ENSMUST00000151483	processed_transcript		11	-1	65182157	3517
ENSMUSG00000030120	protein_coding	Mlf2	ENSMUST00000204177	retained_intron		6	1	124931386	3489
ENSMUSG00000000276	protein_coding	Dgke	ENSMUST00000000285	protein_coding	principal1	11	-1	89060748	5208
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000105637	protein_coding	alternative2	4	-1	154636866	8595
ENSMUSG00000020542	protein_coding	Myocd	ENSMUST00000150823	processed_transcript		11	-1	65269854	377
ENSMUSG00000039364	protein_coding	Sectm1b	ENSMUST00000168459	protein_coding	principal1	11	-1	121063538	1075
ENSMUSG00000035126	protein_coding	Wdr78	ENSMUST00000136355	retained_intron		4	-1	103075619	5214
ENSMUSG00000030120	protein_coding	Mlf2	ENSMUST00000204815	retained_intron		6	1	124931405	772
ENSMUSG00000020542	protein_coding	Myocd	ENSMUST00000144399	protein_coding		11	-1	65205467	621
ENSMUSG00000084144	processed_pseudogene	Gm12516	ENSMUST00000120819	processed_pseudogene		4	-1	55392701	385
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000205120	protein_coding		6	1	53573300	7482
ENSMUSG00000030120	protein_coding	Mlf2	ENSMUST00000204534	retained_intron		6	1	124931405	806
ENSMUSG00000035126	protein_coding	Wdr78	ENSMUST00000152647	processed_transcript		4	-1	103041617	276
ENSMUSG00000028397	protein_coding	Kdm4c	ENSMUST00000077851	protein_coding	principal1	4	1	74242497	4189
ENSMUSG00000035126	protein_coding	Wdr78	ENSMUST00000148673	protein_coding		4	-1	103087356	429
ENSMUSG00000044296	protein_coding	Zfp879	ENSMUST00000109134	protein_coding	principal1	11	-1	50841552	2414
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000204096	retained_intron		6	1	53573375	3358
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000096109	protein_coding	alternative2	16	-1	32099738	993
ENSMUSG00000063867	protein_coding	Olfr1511	ENSMUST00000214168	protein_coding	principal1	14	-1	52397379	1468
ENSMUSG00000028397	protein_coding	Kdm4c	ENSMUST00000030102	protein_coding	principal1	4	1	74251936	4196
ENSMUSG00000019054	protein_coding	Fis1	ENSMUST00000138610	processed_transcript		5	1	136962433	723
ENSMUSG00000053007	protein_coding	Creb5	ENSMUST00000203641	protein_coding		6	1	53573376	362
ENSMUSG00000020542	protein_coding	Myocd	ENSMUST00000108695	protein_coding	alternative2	11	-1	65269989	5114
ENSMUSG00000071657	protein_coding	Bscl2	ENSMUST00000159770	processed_transcript		19	1	8837687	846
ENSMUSG00000063867	protein_coding	Olfr1511	ENSMUST00000078171	protein_coding	principal1	14	-1	52390771	957
ENSMUSG00000044296	protein_coding	Zfp879	ENSMUST00000109133	protein_coding		11	-1	50841546	2229
ENSMUSG00000019054	protein_coding	Fis1	ENSMUST00000147557	processed_transcript		5	1	136962444	770
ENSMUSG00000078780	protein_coding	Gm5150	ENSMUST00000194367	protein_coding	principal1	3	-1	16006437	1212
ENSMUSG00000019054	protein_coding	Fis1	ENSMUST00000152658	processed_transcript		5	1	136962845	565
ENSMUSG00000078780	protein_coding	Gm5150	ENSMUST00000108347	protein_coding	principal1	3	-1	16006332	913
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000155966	protein_coding	alternative2	16	-1	32099728	963
ENSMUSG00000114388	lincRNA	Gm48510	ENSMUST00000225455	lincRNA		13	1	41176888	906
ENSMUSG00000028397	protein_coding	Kdm4c	ENSMUST00000156065	processed_transcript		4	1	74262809	1844
ENSMUSG00000044296	protein_coding	Zfp879	ENSMUST00000049625	protein_coding	principal1	11	-1	50841552	2408
ENSMUSG00000103535	processed_pseudogene	Gm37836	ENSMUST00000195875	processed_pseudogene		3	-1	16078324	175
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000147688	nonsense_mediated_decay		16	-1	32099707	713
ENSMUSG00000028397	protein_coding	Kdm4c	ENSMUST00000149295	protein_coding		4	1	74262809	465
ENSMUSG00000028397	protein_coding	Kdm4c	ENSMUST00000148753	processed_transcript		4	1	74262810	606
ENSMUSG00000028397	protein_coding	Kdm4c	ENSMUST00000150439	processed_transcript		4	1	74262810	661
ENSMUSG00000114560	unprocessed_pseudogene	Gm35160	ENSMUST00000223759	unprocessed_pseudogene		13	1	40846739	816
ENSMUSG00000113433	lincRNA	Gm47489	ENSMUST00000222659	lincRNA		12	-1	68532231	583
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000147003	nonsense_mediated_decay		16	-1	32099693	940
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000133584	nonsense_mediated_decay		16	-1	32099696	795
ENSMUSG00000031875	protein_coding	Cmtm3	ENSMUST00000212139	protein_coding		8	1	104339410	502
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000070313	protein_coding	alternative2	4	-1	154636866	8429
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000161954	protein_coding	alternative2	1	-1	126492927	7090
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000136643	nonsense_mediated_decay		16	-1	32099700	599
ENSMUSG00000107640	antisense	Gm38804	ENSMUST00000203998	antisense		6	-1	48622357	767
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000105636	protein_coding	alternative2	4	-1	154636866	8426
ENSMUSG00000035126	protein_coding	Wdr78	ENSMUST00000036557	protein_coding		4	-1	103114299	3479
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000135677	retained_intron		16	-1	32097525	670
ENSMUSG00000055976	protein_coding	Cldn23	ENSMUST00000060128	protein_coding	principal1	8	-1	35826559	1848
ENSMUSG00000107789	protein_coding	Gm44965	ENSMUST00000204879	processed_transcript		6	1	48593941	372
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000162877	protein_coding		1	-1	126492742	2630
ENSMUSG00000075590	protein_coding	Nrbp2	ENSMUST00000228366	protein_coding	principal1	15	-1	76091627	3192
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000144216	nonsense_mediated_decay		16	-1	32099711	929
ENSMUSG00000002129	protein_coding	Sf3a1	ENSMUST00000002198	protein_coding	principal1	11	1	4160350	4920
ENSMUSG00000035126	protein_coding	Wdr78	ENSMUST00000036451	protein_coding		4	-1	103114299	3671
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000160736	processed_transcript		1	-1	125965200	756
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000057846	protein_coding	alternative2	1	-1	126448456	5334
ENSMUSG00000107789	protein_coding	Gm44965	ENSMUST00000204121	nonsense_mediated_decay	principal1	6	1	48593944	360
ENSMUSG00000055976	protein_coding	Cldn23	ENSMUST00000210370	protein_coding		8	-1	35825575	232
ENSMUSG00000002129	protein_coding	Sf3a1	ENSMUST00000132666	retained_intron		11	1	4160355	1636
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000094610	protein_coding		1	-1	126023103	739
ENSMUSG00000113166	processed_pseudogene	Gm19047	ENSMUST00000220922	processed_pseudogene		12	1	68536744	1099
ENSMUSG00000075590	protein_coding	Nrbp2	ENSMUST00000228022	retained_intron		15	-1	76090013	2496
ENSMUSG00000107588	protein_coding	Gm45021	ENSMUST00000204521	protein_coding	principal1	6	1	48589610	369
ENSMUSG00000023791	protein_coding	Pigx	ENSMUST00000189013	protein_coding	principal2	16	-1	32099727	982
ENSMUSG00000099347	unprocessed_pseudogene	Gm28093	ENSMUST00000189016	unprocessed_pseudogene		Y	-1	30361472	696
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000159934	processed_transcript		1	-1	126035125	619
ENSMUSG00000075590	protein_coding	Nrbp2	ENSMUST00000227183	retained_intron		15	-1	76088994	525
ENSMUSG00000109761	lincRNA	5430403N17Rik	ENSMUST00000210717	lincRNA		8	-1	35882957	2553
ENSMUSG00000075590	protein_coding	Nrbp2	ENSMUST00000227646	retained_intron		15	-1	76090408	872
ENSMUSG00000086513	unprocessed_pseudogene	9130208D14Rik	ENSMUST00000146911	unprocessed_pseudogene		7	-1	105831515	7293
ENSMUSG00000113503	processed_pseudogene	Gm47490	ENSMUST00000221958	processed_pseudogene		12	1	68546647	683
ENSMUSG00000064016	protein_coding	Gm648	ENSMUST00000081133	protein_coding	principal1	X	-1	56549606	1040
ENSMUSG00000075590	protein_coding	Nrbp2	ENSMUST00000226444	nonsense_mediated_decay		15	-1	76091626	1115
ENSMUSG00000078689	protein_coding	Mup6	ENSMUST00000107521	protein_coding		4	1	59964294	642
ENSMUSG00000075590	protein_coding	Nrbp2	ENSMUST00000226356	processed_transcript		15	-1	76090600	418
ENSMUSG00000007216	protein_coding	Zfp775	ENSMUST00000204095	protein_coding	principal1	6	1	48602063	4143
ENSMUSG00000037296	protein_coding	Lsm1	ENSMUST00000038421	protein_coding	principal1	8	1	25785288	2663
ENSMUSG00000075590	protein_coding	Nrbp2	ENSMUST00000228431	processed_transcript		15	-1	76090528	458
ENSMUSG00000078689	protein_coding	Mup6	ENSMUST00000107517	protein_coding	principal1	4	1	60003438	926
ENSMUSG00000007216	protein_coding	Zfp775	ENSMUST00000204042	protein_coding		6	1	48605538	701
ENSMUSG00000063106	protein_coding	Olfr1510	ENSMUST00000215928	protein_coding	principal1	14	-1	52414373	1934
ENSMUSG00000075590	protein_coding	Nrbp2	ENSMUST00000228419	nonsense_mediated_decay		15	-1	76091378	369
ENSMUSG00000086625	antisense	Gm11831	ENSMUST00000141538	antisense		4	-1	11502839	629
ENSMUSG00000037296	protein_coding	Lsm1	ENSMUST00000210647	retained_intron		8	1	25785559	672
ENSMUSG00000078689	protein_coding	Mup6	ENSMUST00000107520	protein_coding	principal1	4	1	60003549	540
ENSMUSG00000024014	protein_coding	Pim1	ENSMUST00000024811	protein_coding	principal1	17	1	29490753	2698
ENSMUSG00000007216	protein_coding	Zfp775	ENSMUST00000061720	protein_coding	principal1	6	1	48613180	4083
ENSMUSG00000037296	protein_coding	Lsm1	ENSMUST00000211168	protein_coding		8	1	25785572	343
ENSMUSG00000063106	protein_coding	Olfr1510	ENSMUST00000079459	protein_coding	principal1	14	-1	52410927	1014
ENSMUSG00000024014	protein_coding	Pim1	ENSMUST00000234650	protein_coding		17	1	29491156	586
ENSMUSG00000037296	protein_coding	Lsm1	ENSMUST00000211670	nonsense_mediated_decay		8	1	25785587	600
ENSMUSG00000075590	protein_coding	Nrbp2	ENSMUST00000019516	protein_coding		15	-1	76090013	2495
ENSMUSG00000105132	processed_pseudogene	Gm43250	ENSMUST00000196536	processed_pseudogene		14	1	52420556	273
ENSMUSG00000031875	protein_coding	Cmtm3	ENSMUST00000212081	protein_coding	principal1	8	1	104340318	850
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000229951	protein_coding		15	-1	75929726	1405
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000162646	protein_coding		1	-1	126830799	1107
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000160693	protein_coding		1	-1	126738202	744
ENSMUSG00000024014	protein_coding	Pim1	ENSMUST00000234294	retained_intron		17	1	29491305	1578
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000141164	processed_transcript		4	-1	154636866	8602
ENSMUSG00000118360	processed_pseudogene	Gm19755	ENSMUST00000237953	processed_pseudogene		19	-1	33668463	195
ENSMUSG00000024014	protein_coding	Pim1	ENSMUST00000234478	processed_transcript		17	1	29492196	1204
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000105638	protein_coding	alternative2	4	-1	154636866	8601
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000230364	nonsense_mediated_decay		15	-1	75929747	1603
ENSMUSG00000031875	protein_coding	Cmtm3	ENSMUST00000211885	protein_coding		8	1	104340362	465
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000142948	protein_coding	alternative2	10	-1	81600875	1961
ENSMUSG00000076758	TR_V_gene	Trav1	ENSMUST00000103567	TR_V_gene	principal5	14	1	52427928	371
ENSMUSG00000031174	protein_coding	Rpgr	ENSMUST00000072393	protein_coding	alternative2	X	-1	10216920	2380
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000097759	protein_coding	alternative2	4	-1	154636866	8544
ENSMUSG00000024014	protein_coding	Pim1	ENSMUST00000234263	processed_transcript		17	1	29492216	355
ENSMUSG00000103130	TEC	F830212C03Rik	ENSMUST00000191701	TEC		15	-1	12635346	2285
ENSMUSG00000052751	protein_coding	Repin1	ENSMUST00000154010	protein_coding		6	1	48593883	1265
ENSMUSG00000076758	TR_V_gene	Trav1	ENSMUST00000185651	TR_V_gene	alternative2	14	1	52427967	329
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000229085	nonsense_mediated_decay		15	-1	75929778	1270
ENSMUSG00000031875	protein_coding	Cmtm3	ENSMUST00000212948	protein_coding		8	1	104340527	523
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000162664	retained_intron		1	-1	126738190	4099
ENSMUSG00000078300	processed_pseudogene	Gm2606	ENSMUST00000100754	processed_pseudogene		15	1	12574889	1002
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000129282	processed_transcript		10	-1	81592715	469
ENSMUSG00000035849	protein_coding	Krt222	ENSMUST00000103132	protein_coding	principal1	11	-1	99244067	3072
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000162647	retained_intron		1	-1	126830481	1510
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000145217	processed_transcript		4	-1	154334852	851
ENSMUSG00000031875	protein_coding	Cmtm3	ENSMUST00000211996	retained_intron		8	1	104340528	630
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000126432	nonsense_mediated_decay		18	1	65800546	737
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000153379	retained_intron		10	-1	81595415	1246
ENSMUSG00000103463	TEC	1700063I16Rik	ENSMUST00000194611	TEC		1	-1	168675882	611
ENSMUSG00000030120	protein_coding	Mlf2	ENSMUST00000203021	protein_coding		6	1	124931425	468
ENSMUSG00000087303	protein_coding	Lipo2	ENSMUST00000238164	processed_transcript		19	-1	33730856	1550
ENSMUSG00000024014	protein_coding	Pim1	ENSMUST00000234665	protein_coding		17	1	29493037	1794
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000156069	processed_transcript		4	-1	154334922	496
ENSMUSG00000030879	protein_coding	Mrpl17	ENSMUST00000124482	protein_coding	principal1	7	-1	105811099	7300
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000131762	processed_transcript		4	-1	154348457	403
ENSMUSG00000052751	protein_coding	Repin1	ENSMUST00000118229	protein_coding	alternative2	6	1	48593891	3138
ENSMUSG00000035849	protein_coding	Krt222	ENSMUST00000038214	protein_coding		11	-1	99244085	2042
ENSMUSG00000024014	protein_coding	Pim1	ENSMUST00000234270	protein_coding		17	1	29493407	867
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000124771	protein_coding		4	-1	154636873	757
ENSMUSG00000117575	processed_transcript	Gm36486	ENSMUST00000234531	lincRNA		17	-1	29434757	438
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000112583	protein_coding	principal3	1	-1	126830632	7212
ENSMUSG00000030879	protein_coding	Mrpl17	ENSMUST00000176158	nonsense_mediated_decay		7	-1	105810958	869
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000135064	processed_transcript		4	-1	154528765	402
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000230736	protein_coding		15	-1	75929778	1319
ENSMUSG00000035849	protein_coding	Krt222	ENSMUST00000154622	processed_transcript		11	-1	99238875	757
ENSMUSG00000039410	protein_coding	Prdm16	ENSMUST00000149605	processed_transcript		4	-1	154636797	615
ENSMUSG00000052751	protein_coding	Repin1	ENSMUST00000135151	protein_coding	alternative2	6	1	48593900	3057
ENSMUSG00000030879	protein_coding	Mrpl17	ENSMUST00000033170	protein_coding		7	-1	105810996	1028
ENSMUSG00000084987	antisense	Gm13134	ENSMUST00000144347	antisense		4	1	154601197	387
ENSMUSG00000038403	protein_coding	Hjv	ENSMUST00000049208	protein_coding	principal1	3	1	96525172	2028
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000072020	protein_coding	principal3	10	-1	81600900	2015
ENSMUSG00000031875	protein_coding	Cmtm3	ENSMUST00000034343	protein_coding	principal1	8	1	104340594	1616
ENSMUSG00000049690	protein_coding	Nckap5	ENSMUST00000094609	protein_coding		1	-1	126830632	2965
ENSMUSG00000035626	protein_coding	Olfr1509	ENSMUST00000205900	protein_coding	principal1	14	1	52442990	2444
ENSMUSG00000052751	protein_coding	Repin1	ENSMUST00000130896	retained_intron		6	1	48593940	656
ENSMUSG00000030879	protein_coding	Mrpl17	ENSMUST00000176498	protein_coding		7	-1	105810999	459
ENSMUSG00000087303	protein_coding	Lipo2	ENSMUST00000236408	processed_transcript		19	-1	33749517	1778
ENSMUSG00000084987	antisense	Gm13134	ENSMUST00000132106	antisense		4	1	154601315	738
ENSMUSG00000035626	protein_coding	Olfr1509	ENSMUST00000215030	protein_coding	principal1	14	1	52443003	2525
ENSMUSG00000104519	TEC	Gm37161	ENSMUST00000191994	TEC		1	-1	125921962	2697
ENSMUSG00000052751	protein_coding	Repin1	ENSMUST00000150030	retained_intron		6	1	48594319	989
ENSMUSG00000117575	processed_transcript	Gm36486	ENSMUST00000234020	retained_intron		17	-1	29437066	4757
ENSMUSG00000117575	processed_transcript	Gm36486	ENSMUST00000234181	lincRNA		17	-1	29437448	1625
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000229289	protein_coding		15	-1	75929787	1223
ENSMUSG00000031875	protein_coding	Cmtm3	ENSMUST00000212399	retained_intron		8	1	104340716	790
ENSMUSG00000030879	protein_coding	Mrpl17	ENSMUST00000176887	protein_coding		7	-1	105811028	380
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000229641	protein_coding	principal1	15	-1	75929832	1355
ENSMUSG00000103824	TEC	Gm38177	ENSMUST00000192213	TEC		1	-1	126324674	1040
ENSMUSG00000086478	lincRNA	Gm14102	ENSMUST00000147678	lincRNA		2	1	132958442	464
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234190	antisense		17	-1	29464750	417
ENSMUSG00000087303	protein_coding	Lipo2	ENSMUST00000147153	protein_coding	principal1	19	-1	33751359	2184
ENSMUSG00000109685	TEC	Gm45912	ENSMUST00000210646	TEC		7	-1	105823806	543
ENSMUSG00000102723	TEC	Gm37936	ENSMUST00000194647	TEC		1	-1	126071461	1322
ENSMUSG00000097871	lincRNA	B230104I21Rik	ENSMUST00000181143	lincRNA		4	1	154336127	876
ENSMUSG00000052751	protein_coding	Repin1	ENSMUST00000009420	protein_coding	principal3	6	1	48593883	3145
ENSMUSG00000115719	lincRNA	4930538L07Rik	ENSMUST00000228165	lincRNA		14	-1	47757493	1494
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000137631	processed_transcript		10	-1	81597345	1972
ENSMUSG00000035626	protein_coding	Olfr1509	ENSMUST00000206100	protein_coding	principal1	14	1	52443050	1161
ENSMUSG00000087303	protein_coding	Lipo2	ENSMUST00000235430	retained_intron		19	-1	33749458	923
ENSMUSG00000031875	protein_coding	Cmtm3	ENSMUST00000212734	retained_intron		8	1	104345041	867
ENSMUSG00000115719	lincRNA	4930538L07Rik	ENSMUST00000228096	lincRNA		14	-1	47757486	926
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000146239	retained_intron		10	-1	81592818	464
ENSMUSG00000052751	protein_coding	Repin1	ENSMUST00000163452	protein_coding	principal3	6	1	48593883	2959
ENSMUSG00000086565	antisense	Gm13133	ENSMUST00000143888	antisense		4	1	154550282	736
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000134457	retained_intron		10	-1	81595244	620
ENSMUSG00000035626	protein_coding	Olfr1509	ENSMUST00000206718	protein_coding		14	1	52443051	697
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000023231	protein_coding	principal1	15	-1	75929753	1335
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000124724	retained_intron		10	-1	81595808	767
ENSMUSG00000086812	protein_coding	Gm8978	ENSMUST00000124230	protein_coding	principal1	19	-1	33625252	2225
ENSMUSG00000115719	lincRNA	4930538L07Rik	ENSMUST00000226197	lincRNA		14	-1	47757498	345
ENSMUSG00000118513	unprocessed_pseudogene	AC141640.1	ENSMUST00000239059	unprocessed_pseudogene		19	-1	33590007	350
ENSMUSG00000086414	transcribed_processed_pseudogene	Gm15645	ENSMUST00000131504	processed_transcript		7	1	105762321	2208
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000131530	processed_transcript		10	-1	81597338	620
ENSMUSG00000035626	protein_coding	Olfr1509	ENSMUST00000206437	protein_coding		14	1	52449348	526
ENSMUSG00000117667	processed_pseudogene	Gm18293	ENSMUST00000237715	processed_pseudogene		19	-1	33673541	213
ENSMUSG00000051111	protein_coding	Sv2c	ENSMUST00000161263	protein_coding	principal1	13	-1	96132577	9101
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000230454	retained_intron		15	-1	75926552	649
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000149721	processed_transcript		10	-1	81597331	623
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234835	antisense		17	-1	29467727	480
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234257	antisense		17	-1	29465200	401
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000139538	retained_intron		18	1	65800550	2829
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000229997	retained_intron		15	-1	75926521	817
ENSMUSG00000086414	transcribed_processed_pseudogene	Gm15645	ENSMUST00000183393	transcribed_processed_pseudogene		7	1	105861768	1299
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234913	antisense		17	-1	29464759	1149
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000135008	processed_transcript		10	-1	81597367	375
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000236847	protein_coding		18	1	65800555	552
ENSMUSG00000097075	protein_coding	Cdiptos	ENSMUST00000180704	retained_intron		7	-1	126975510	2022
ENSMUSG00000107226	TEC	Gm43594	ENSMUST00000201153	TEC		5	1	81249249	3442
ENSMUSG00000035626	protein_coding	Olfr1509	ENSMUST00000045066	protein_coding	principal1	14	1	52450393	1010
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000229786	retained_intron		15	-1	75927062	415
ENSMUSG00000107375	TEC	Gm43084	ENSMUST00000200696	TEC		5	1	81535726	947
ENSMUSG00000051111	protein_coding	Sv2c	ENSMUST00000182180	processed_transcript		13	-1	95984850	1036
ENSMUSG00000052730	processed_transcript	Gm5111	ENSMUST00000203141	lincRNA		6	1	48589445	964
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000235959	retained_intron		18	1	65800571	3992
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234040	antisense		17	-1	29491925	3417
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000151858	protein_coding		10	-1	81600857	627
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234435	antisense		17	-1	29464620	1066
ENSMUSG00000019230	protein_coding	Lhx9	ENSMUST00000019374	protein_coding	principal3	1	-1	138842457	4937
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000230485	processed_transcript		15	-1	75929740	383
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000153193	protein_coding		18	1	65800572	821
ENSMUSG00000059363	protein_coding	Fxn	ENSMUST00000081333	protein_coding	principal1	19	-1	24280605	1114
ENSMUSG00000052730	processed_transcript	Gm5111	ENSMUST00000181661	retained_intron		6	1	48589588	931
ENSMUSG00000103530	lincRNA	Gm37839	ENSMUST00000192576	lincRNA		1	-1	169347632	492
ENSMUSG00000034758	protein_coding	Tle6	ENSMUST00000127546	protein_coding		10	-1	81601073	544
ENSMUSG00000051111	protein_coding	Sv2c	ENSMUST00000182289	protein_coding		13	-1	96088866	2197
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000235051	antisense		17	-1	29464926	1565
ENSMUSG00000087431	antisense	Gm16054	ENSMUST00000139469	antisense		5	-1	81798426	1819
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000229668	retained_intron		15	-1	75929768	523
ENSMUSG00000084404	processed_pseudogene	Gm12513	ENSMUST00000118617	processed_pseudogene		4	-1	55409307	352
ENSMUSG00000038217	protein_coding	Tlcd2	ENSMUST00000124718	processed_transcript		11	1	75461715	564
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234885	antisense		17	-1	29467776	1419
ENSMUSG00000051111	protein_coding	Sv2c	ENSMUST00000220740	processed_transcript		13	-1	95990226	579
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000235107	antisense		17	-1	29464155	1161
ENSMUSG00000022570	protein_coding	Tsta3	ENSMUST00000230884	retained_intron		15	-1	75929744	723
ENSMUSG00000087329	lincRNA	Gm15671	ENSMUST00000124160	lincRNA		1	1	68024243	576
ENSMUSG00000087070	lincRNA	Gm12505	ENSMUST00000146041	lincRNA		4	-1	55418842	757
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234333	antisense		17	-1	29464987	1543
ENSMUSG00000099115	protein_coding	Gm17190	ENSMUST00000184369	translated_processed_pseudogene		13	1	96082054	849
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000235057	antisense		17	-1	29465181	1239
ENSMUSG00000086346	lincRNA	Gm12510	ENSMUST00000152190	lincRNA		4	-1	55465814	362
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000235030	antisense		17	-1	29465183	1307
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234732	antisense		17	-1	29467756	1323
ENSMUSG00000036202	protein_coding	Rif1	ENSMUST00000112693	protein_coding	principal1	2	1	52072832	8509
ENSMUSG00000059363	protein_coding	Fxn	ENSMUST00000123684	nonsense_mediated_decay		19	-1	24280568	1072
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000235120	antisense		17	-1	29469631	1302
ENSMUSG00000099115	protein_coding	Gm17190	ENSMUST00000185178	protein_coding	principal1	13	1	96082158	1074
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234219	antisense		17	-1	29467356	837
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234792	antisense		17	-1	29469584	1297
ENSMUSG00000086831	antisense	Gm14280	ENSMUST00000138080	antisense		2	-1	131721838	1444
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000181920	antisense		17	-1	29491565	888
ENSMUSG00000097075	protein_coding	Cdiptos	ENSMUST00000205437	protein_coding	principal5	7	-1	126975923	1016
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234993	antisense		17	-1	29491201	694
ENSMUSG00000059363	protein_coding	Fxn	ENSMUST00000132688	retained_intron		19	-1	24278171	1402
ENSMUSG00000036202	protein_coding	Rif1	ENSMUST00000126218	nonsense_mediated_decay		2	1	52073072	304
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234606	antisense		17	-1	29466149	967
ENSMUSG00000097125	antisense	Gm26885	ENSMUST00000234684	antisense		17	-1	29467943	1202
ENSMUSG00000070471	protein_coding	Erich6	ENSMUST00000041115	protein_coding	principal1	3	-1	58637207	2195
ENSMUSG00000082107	processed_pseudogene	Gm16216	ENSMUST00000118970	processed_pseudogene		19	1	24289716	1111
ENSMUSG00000086382	antisense	Chrna1os	ENSMUST00000147235	antisense		2	1	73584860	493
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000235411	processed_transcript		18	1	65800979	686
ENSMUSG00000086382	antisense	Chrna1os	ENSMUST00000125413	antisense		2	1	73584850	680
ENSMUSG00000083469	processed_pseudogene	Gm14281	ENSMUST00000121700	processed_pseudogene		2	1	131846395	1294
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000155668	retained_intron		18	1	65801302	828
ENSMUSG00000116083	processed_pseudogene	Gm5469	ENSMUST00000229137	processed_pseudogene		15	1	41922076	1076
ENSMUSG00000097075	protein_coding	Cdiptos	ENSMUST00000205903	nonsense_mediated_decay		7	-1	126975819	981
ENSMUSG00000019230	protein_coding	Lhx9	ENSMUST00000112030	protein_coding		1	-1	138848577	4633
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000125552	processed_transcript		18	1	65806564	713
ENSMUSG00000116215	processed_pseudogene	Gm5470	ENSMUST00000229397	processed_pseudogene		15	-1	42032742	1424
ENSMUSG00000022197	protein_coding	Pdzd2	ENSMUST00000075317	protein_coding	principal1	15	-1	12592556	10756
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000126651	processed_transcript		18	1	65814014	425
ENSMUSG00000020397	protein_coding	Med7	ENSMUST00000128940	protein_coding		11	1	46436978	702
ENSMUSG00000024516	protein_coding	Sec11c	ENSMUST00000235765	processed_transcript		18	1	65814637	427
ENSMUSG00000097075	protein_coding	Cdiptos	ENSMUST00000181859	retained_intron		7	-1	126976098	905
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234231	lincRNA		17	1	29432835	462
ENSMUSG00000117751	TEC	Gm50256	ENSMUST00000237019	TEC		18	-1	65811333	342
ENSMUSG00000097075	protein_coding	Cdiptos	ENSMUST00000206296	protein_coding	alternative2	7	-1	126975788	845
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234282	lincRNA		17	1	29434817	600
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234827	lincRNA		17	1	29434818	468
ENSMUSG00000097075	protein_coding	Cdiptos	ENSMUST00000206816	nonsense_mediated_decay		7	-1	126975846	694
ENSMUSG00000020397	protein_coding	Med7	ENSMUST00000109231	protein_coding		11	1	46436971	778
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234691	lincRNA		17	1	29434818	481
ENSMUSG00000086226	antisense	Gm12660	ENSMUST00000123764	antisense		11	-1	50852582	664
ENSMUSG00000045094	protein_coding	Arhgef37	ENSMUST00000171629	protein_coding	principal1	18	-1	61536594	5429
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234472	lincRNA		17	1	29434823	627
ENSMUSG00000036202	protein_coding	Rif1	ENSMUST00000145130	retained_intron		2	1	52089573	2789
ENSMUSG00000019230	protein_coding	Lhx9	ENSMUST00000046870	protein_coding	alternative1	1	-1	138847719	3645
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234775	lincRNA		17	1	29434842	489
ENSMUSG00000097075	protein_coding	Cdiptos	ENSMUST00000206667	retained_intron		7	-1	126976052	459
ENSMUSG00000086822	lincRNA	5330413P13Rik	ENSMUST00000143453	lincRNA		2	-1	131847655	3630
ENSMUSG00000086822	lincRNA	5330413P13Rik	ENSMUST00000210606	lincRNA		2	-1	131847674	1464
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234384	lincRNA		17	1	29434862	302
ENSMUSG00000038217	protein_coding	Tlcd2	ENSMUST00000043598	protein_coding	principal3	11	1	75468079	1153
ENSMUSG00000086822	lincRNA	5330413P13Rik	ENSMUST00000210961	lincRNA		2	-1	131847683	913
ENSMUSG00000036202	protein_coding	Rif1	ENSMUST00000125116	processed_transcript		2	1	52093195	822
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234887	lincRNA		17	1	29445905	726
ENSMUSG00000000617	protein_coding	Grm6	ENSMUST00000156890	processed_transcript		11	1	50850685	1463
ENSMUSG00000045094	protein_coding	Arhgef37	ENSMUST00000236608	nonsense_mediated_decay		18	-1	61509279	2661
ENSMUSG00000022197	protein_coding	Pdzd2	ENSMUST00000191339	retained_intron		15	-1	12412380	3143
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234066	lincRNA		17	1	29453674	819
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234101	lincRNA		17	1	29457737	1218
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234276	lincRNA		17	1	29457797	1079
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000235080	lincRNA		17	1	29457845	958
ENSMUSG00000086822	lincRNA	5330413P13Rik	ENSMUST00000150466	lincRNA		2	-1	131847660	2173
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234854	lincRNA		17	1	29457945	616
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234969	lincRNA		17	1	29458019	604
ENSMUSG00000036202	protein_coding	Rif1	ENSMUST00000125322	nonsense_mediated_decay		2	1	52110984	3601
ENSMUSG00000045094	protein_coding	Arhgef37	ENSMUST00000237557	protein_coding		18	-1	61536575	530
ENSMUSG00000022197	protein_coding	Pdzd2	ENSMUST00000190929	protein_coding		15	-1	12549278	1210
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000235113	lincRNA		17	1	29458448	680
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234307	lincRNA		17	1	29458506	1779
ENSMUSG00000086822	lincRNA	5330413P13Rik	ENSMUST00000140443	lincRNA		2	-1	131847623	2054
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234105	lincRNA		17	1	29465004	692
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234786	lincRNA		17	1	29465008	724
ENSMUSG00000036202	protein_coding	Rif1	ENSMUST00000125376	protein_coding		2	1	52111461	3885
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234298	lincRNA		17	1	29465008	537
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234283	lincRNA		17	1	29465044	577
ENSMUSG00000038217	protein_coding	Tlcd2	ENSMUST00000108435	protein_coding	alternative2	11	1	75468079	1112
ENSMUSG00000019230	protein_coding	Lhx9	ENSMUST00000112026	protein_coding	alternative1	1	-1	138842429	2065
ENSMUSG00000081422	transcribed_processed_pseudogene	Gm14282	ENSMUST00000119484	transcribed_processed_pseudogene		2	-1	131845595	240
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234440	lincRNA		17	1	29465044	911
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000235077	lincRNA		17	1	29465044	734
ENSMUSG00000022197	protein_coding	Pdzd2	ENSMUST00000189469	retained_intron		15	-1	12739924	4071
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234306	lincRNA		17	1	29465050	870
ENSMUSG00000038217	protein_coding	Tlcd2	ENSMUST00000153236	retained_intron		11	1	75468711	847
ENSMUSG00000036202	protein_coding	Rif1	ENSMUST00000152178	protein_coding		2	1	52112133	2784
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000233990	lincRNA		17	1	29465050	937
ENSMUSG00000062432	protein_coding	Cyp26c1	ENSMUST00000073391	protein_coding	principal1	19	1	37685581	1747
ENSMUSG00000022197	protein_coding	Pdzd2	ENSMUST00000186113	protein_coding		15	-1	12493559	438
ENSMUSG00000019230	protein_coding	Lhx9	ENSMUST00000192425	retained_intron		1	-1	138833659	1946
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000235076	lincRNA		17	1	29465050	626
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234336	lincRNA		17	1	29465050	802
ENSMUSG00000112789	processed_pseudogene	Gm19326	ENSMUST00000219818	processed_pseudogene		10	1	75767161	326
ENSMUSG00000019230	protein_coding	Lhx9	ENSMUST00000194557	nonsense_mediated_decay		1	-1	138842454	1058
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234548	lincRNA		17	1	29465050	943
ENSMUSG00000022197	protein_coding	Pdzd2	ENSMUST00000189324	protein_coding		15	-1	12549877	796
ENSMUSG00000117427	lincRNA	Gm36199	ENSMUST00000234634	lincRNA		17	1	29465060	760
ENSMUSG00000091002	protein_coding	Tcerg1l	ENSMUST00000160436	protein_coding	principal1	7	-1	138397728	2565
ENSMUSG00000110416	processed_pseudogene	Gm19248	ENSMUST00000209404	processed_pseudogene		7	1	46967248	110
ENSMUSG00000019230	protein_coding	Lhx9	ENSMUST00000093486	protein_coding		1	-1	138847579	4551
ENSMUSG00000022197	protein_coding	Pdzd2	ENSMUST00000185619	processed_transcript		15	-1	12549785	818
ENSMUSG00000115237	unprocessed_pseudogene	Gm46474	ENSMUST00000227667	unprocessed_pseudogene		14	1	36013948	636
ENSMUSG00000022197	protein_coding	Pdzd2	ENSMUST00000187398	retained_intron		15	-1	12549281	622
ENSMUSG00000115295	processed_pseudogene	Gm19129	ENSMUST00000227394	processed_pseudogene		14	1	36050560	661
ENSMUSG00000022197	protein_coding	Pdzd2	ENSMUST00000189746	processed_transcript		15	-1	12599056	1051
ENSMUSG00000040720	protein_coding	Virma	ENSMUST00000055372	protein_coding		4	1	11485958	3954
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000111244	protein_coding	alternative2	5	-1	134456256	3461
ENSMUSG00000109420	antisense	Gm44702	ENSMUST00000209194	antisense		7	-1	28810497	592
ENSMUSG00000102855	processed_pseudogene	Gm38002	ENSMUST00000193255	processed_pseudogene		3	-1	25184979	180
ENSMUSG00000091002	protein_coding	Tcerg1l	ENSMUST00000161213	processed_transcript		7	-1	138271329	779
ENSMUSG00000021457	protein_coding	Syk	ENSMUST00000150672	retained_intron		13	1	52583503	2993
ENSMUSG00000085148	processed_transcript	Mir22hg	ENSMUST00000149940	processed_transcript		11	1	75461539	1752
ENSMUSG00000069083	processed_pseudogene	Gm10259	ENSMUST00000091289	processed_pseudogene		3	-1	25212605	1590
ENSMUSG00000036862	protein_coding	Dchs1	ENSMUST00000078482	protein_coding	principal1	7	-1	105787654	10754
ENSMUSG00000085148	processed_transcript	Mir22hg	ENSMUST00000134345	processed_transcript		11	1	75461644	449
ENSMUSG00000030120	protein_coding	Mlf2	ENSMUST00000180095	protein_coding	principal1	6	1	124931432	1475
ENSMUSG00000020397	protein_coding	Med7	ENSMUST00000109232	protein_coding	principal1	11	1	46436974	2547
ENSMUSG00000018841	protein_coding	Rad51d	ENSMUST00000146053	nonsense_mediated_decay		11	-1	82890589	3547
ENSMUSG00000024766	protein_coding	Lipo3	ENSMUST00000112508	protein_coding	principal1	19	-1	33590308	2839
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000045665	protein_coding	alternative2	1	-1	134955940	8840
ENSMUSG00000021457	protein_coding	Syk	ENSMUST00000140339	retained_intron		13	1	52596959	2030
ENSMUSG00000036862	protein_coding	Dchs1	ENSMUST00000140959	nonsense_mediated_decay		7	-1	105757889	743
ENSMUSG00000110001	lincRNA	C86187	ENSMUST00000209497	lincRNA		7	-1	46975911	2415
ENSMUSG00000031174	protein_coding	Rpgr	ENSMUST00000115534	protein_coding	alternative2	X	-1	10216453	2795
ENSMUSG00000091002	protein_coding	Tcerg1l	ENSMUST00000162222	retained_intron		7	-1	138397730	2489
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000137022	processed_transcript		1	-1	134760353	660
ENSMUSG00000110001	lincRNA	C86187	ENSMUST00000210486	lincRNA		7	-1	46975911	2020
ENSMUSG00000073414	protein_coding	Mpig6b	ENSMUST00000097337	protein_coding		17	-1	35066184	2252
ENSMUSG00000110001	lincRNA	C86187	ENSMUST00000209331	lincRNA		7	-1	46975176	790
ENSMUSG00000020397	protein_coding	Med7	ENSMUST00000020665	protein_coding	principal1	11	1	46436952	1193
ENSMUSG00000030120	protein_coding	Mlf2	ENSMUST00000032214	protein_coding	principal1	6	1	124931476	1451
ENSMUSG00000036862	protein_coding	Dchs1	ENSMUST00000154659	retained_intron		7	-1	105787552	4073
ENSMUSG00000024766	protein_coding	Lipo3	ENSMUST00000145807	processed_transcript		19	-1	33561469	3419
ENSMUSG00000110001	lincRNA	C86187	ENSMUST00000210794	lincRNA		7	-1	46975512	830
ENSMUSG00000020826	protein_coding	Nos2	ENSMUST00000018610	protein_coding	principal2	11	1	78920787	4192
ENSMUSG00000030844	protein_coding	Rgs10	ENSMUST00000033133	protein_coding	principal1	7	-1	128418173	880
ENSMUSG00000024766	protein_coding	Lipo3	ENSMUST00000235583	processed_transcript		19	-1	33561382	1728
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000175889	protein_coding		6	1	4902917	3462
ENSMUSG00000109637	processed_pseudogene	Gm31941	ENSMUST00000209689	processed_pseudogene		7	1	46975366	350
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000168998	protein_coding		6	1	4902974	2966
ENSMUSG00000073414	protein_coding	Mpig6b	ENSMUST00000174190	protein_coding	principal1	17	-1	35066170	729
ENSMUSG00000000617	protein_coding	Grm6	ENSMUST00000000631	protein_coding	principal1	11	1	50850986	4291
ENSMUSG00000030120	protein_coding	Mlf2	ENSMUST00000203133	protein_coding		6	1	124931910	565
ENSMUSG00000107893	TEC	Gm44192	ENSMUST00000204195	TEC		6	-1	112088194	556
ENSMUSG00000020397	protein_coding	Med7	ENSMUST00000152119	protein_coding		11	1	46436925	381
ENSMUSG00000031174	protein_coding	Rpgr	ENSMUST00000044598	protein_coding	alternative2	X	-1	10216920	3805
ENSMUSG00000024766	protein_coding	Lipo3	ENSMUST00000025694	protein_coding	principal1	19	-1	33761951	2768
ENSMUSG00000030844	protein_coding	Rgs10	ENSMUST00000134144	processed_transcript		7	-1	128393685	458
ENSMUSG00000030844	protein_coding	Rgs10	ENSMUST00000129144	processed_transcript		7	-1	128376337	160
ENSMUSG00000020397	protein_coding	Med7	ENSMUST00000140027	protein_coding		11	1	46436949	331
ENSMUSG00000031174	protein_coding	Rpgr	ENSMUST00000073392	protein_coding	principal3	X	-1	10216920	2926
ENSMUSG00000030120	protein_coding	Mlf2	ENSMUST00000203060	retained_intron		6	1	124932624	593
ENSMUSG00000020826	protein_coding	Nos2	ENSMUST00000208783	processed_transcript		11	1	78924740	648
ENSMUSG00000030844	protein_coding	Rgs10	ENSMUST00000129120	retained_intron		7	-1	128404478	469
ENSMUSG00000020826	protein_coding	Nos2	ENSMUST00000214397	protein_coding	alternative2	11	1	78925176	3456
ENSMUSG00000020397	protein_coding	Med7	ENSMUST00000156073	processed_transcript		11	1	46437005	445
ENSMUSG00000099490	processed_pseudogene	Gm18802	ENSMUST00000186270	processed_pseudogene		1	1	58630375	888
ENSMUSG00000085924	unprocessed_pseudogene	Gm8980	ENSMUST00000140232	unprocessed_pseudogene		19	-1	33688481	2197
ENSMUSG00000000617	protein_coding	Grm6	ENSMUST00000126890	processed_transcript		11	1	50856824	3305
ENSMUSG00000020397	protein_coding	Med7	ENSMUST00000133635	protein_coding		11	1	46439652	740
ENSMUSG00000031174	protein_coding	Rpgr	ENSMUST00000115533	protein_coding	alternative2	X	-1	10216920	2739
ENSMUSG00000030844	protein_coding	Rgs10	ENSMUST00000145739	protein_coding		7	-1	128418163	564
ENSMUSG00000116842	TEC	Gm49588	ENSMUST00000232530	TEC		16	1	18482056	4490
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000171794	protein_coding	alternative2	5	-1	134456716	3524
ENSMUSG00000112933	processed_pseudogene	Gm47491	ENSMUST00000223294	processed_pseudogene		12	-1	68812297	677
ENSMUSG00000020397	protein_coding	Med7	ENSMUST00000170928	protein_coding	principal1	11	1	46436961	2390
ENSMUSG00000030844	protein_coding	Rgs10	ENSMUST00000147840	protein_coding		7	-1	128418758	373
ENSMUSG00000031174	protein_coding	Rpgr	ENSMUST00000115532	protein_coding	alternative2	X	-1	10216920	3313
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000176263	nonsense_mediated_decay		6	1	4903018	4810
ENSMUSG00000000617	protein_coding	Grm6	ENSMUST00000171427	protein_coding	principal1	11	1	50850685	4330
ENSMUSG00000113320	lincRNA	Gm47515	ENSMUST00000221589	lincRNA		12	-1	68994970	626
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000201991	protein_coding		5	1	53466152	687
ENSMUSG00000084964	processed_transcript	Gm15503	ENSMUST00000206239	retained_intron		7	-1	128410993	2026
ENSMUSG00000096638	IG_V_gene	Ighv2-9	ENSMUST00000103451	IG_V_gene	principal1	12	-1	113879541	362
ENSMUSG00000082952	processed_pseudogene	Gm12507	ENSMUST00000119155	processed_pseudogene		4	1	55508294	415
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000201721	retained_intron		5	1	53555706	1519
ENSMUSG00000084964	processed_transcript	Gm15503	ENSMUST00000141541	sense_intronic		7	-1	128412341	449
ENSMUSG00000113098	lincRNA	Gm2912	ENSMUST00000223472	lincRNA		12	1	68970570	1799
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000035813	protein_coding	principal2	6	1	4903320	9547
ENSMUSG00000001666	protein_coding	Ddt	ENSMUST00000172820	protein_coding		10	-1	75773034	574
ENSMUSG00000092586	protein_coding	Ly6g6c	ENSMUST00000173207	protein_coding	alternative2	17	1	35065388	598
ENSMUSG00000098181	processed_pseudogene	Rps12-ps24	ENSMUST00000182321	processed_pseudogene		8	1	36025753	381
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000175962	protein_coding		6	1	4903373	3769
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000156348	processed_transcript		1	-1	134846420	2671
ENSMUSG00000105714	processed_pseudogene	Gm43380	ENSMUST00000200421	processed_pseudogene		5	1	143067653	220
ENSMUSG00000106543	sense_intronic	Gm43378	ENSMUST00000199336	sense_intronic		5	-1	143050043	582
ENSMUSG00000034917	protein_coding	Tjp3	ENSMUST00000045744	protein_coding	principal1	10	-1	81291267	3024
ENSMUSG00000030682	protein_coding	Cdipt	ENSMUST00000032920	protein_coding	principal1	7	1	126975914	1974
ENSMUSG00000031174	protein_coding	Rpgr	ENSMUST00000155734	retained_intron		X	-1	10216758	2672
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000238280	protein_coding		1	-1	134803851	1521
ENSMUSG00000034917	protein_coding	Tjp3	ENSMUST00000219479	protein_coding	principal1	10	-1	81291581	2901
ENSMUSG00000051727	protein_coding	Kctd14	ENSMUST00000206658	protein_coding	principal3	7	1	97451323	2339
ENSMUSG00000031174	protein_coding	Rpgr	ENSMUST00000124744	retained_intron		X	-1	10216733	2445
ENSMUSG00000030682	protein_coding	Cdipt	ENSMUST00000206780	protein_coding		7	1	126976378	797
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000042135	protein_coding	principal1	5	1	136083916	2914
ENSMUSG00000040720	protein_coding	Virma	ENSMUST00000059914	protein_coding	principal1	4	1	11485958	6506
ENSMUSG00000102397	sense_intronic	Gm37573	ENSMUST00000193993	sense_intronic		3	-1	25700303	931
ENSMUSG00000034917	protein_coding	Tjp3	ENSMUST00000218520	retained_intron		10	-1	81280117	583
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000141419	retained_intron		1	-1	134803851	3808
ENSMUSG00000104295	processed_pseudogene	Gm6197	ENSMUST00000192273	processed_pseudogene		3	1	25731243	454
ENSMUSG00000030682	protein_coding	Cdipt	ENSMUST00000206794	nonsense_mediated_decay		7	1	126976436	1838
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000191540	retained_intron		1	-1	134783297	2351
ENSMUSG00000034917	protein_coding	Tjp3	ENSMUST00000218484	protein_coding		10	-1	81285769	685
ENSMUSG00000051727	protein_coding	Kctd14	ENSMUST00000121987	protein_coding		7	1	97453204	1210
ENSMUSG00000092586	protein_coding	Ly6g6c	ENSMUST00000173478	protein_coding	principal2	17	1	35067325	962
ENSMUSG00000040720	protein_coding	Virma	ENSMUST00000108307	protein_coding		4	1	11486043	6571
ENSMUSG00000071657	protein_coding	Bscl2	ENSMUST00000159634	protein_coding	alternative2	19	1	8837729	1684
ENSMUSG00000030682	protein_coding	Cdipt	ENSMUST00000206170	nonsense_mediated_decay		7	1	126976458	1833
ENSMUSG00000001666	protein_coding	Ddt	ENSMUST00000001716	protein_coding	principal1	10	-1	75773414	649
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000146639	processed_transcript		1	-1	134835820	277
ENSMUSG00000031174	protein_coding	Rpgr	ENSMUST00000143532	processed_transcript		X	-1	10216482	509
ENSMUSG00000030682	protein_coding	Cdipt	ENSMUST00000206346	protein_coding		7	1	126976588	806
ENSMUSG00000034917	protein_coding	Tjp3	ENSMUST00000219958	retained_intron		10	-1	81291215	599
ENSMUSG00000092586	protein_coding	Ly6g6c	ENSMUST00000174876	protein_coding	alternative2	17	1	35067390	723
ENSMUSG00000101379	lincRNA	Gm28092	ENSMUST00000186709	lincRNA		Y	1	30396170	174
ENSMUSG00000030682	protein_coding	Cdipt	ENSMUST00000206450	protein_coding		7	1	126976730	951
ENSMUSG00000093445	protein_coding	Lrch4	ENSMUST00000031734	protein_coding	principal3	5	1	137629121	3078
ENSMUSG00000074664	antisense	A830092H15Rik	ENSMUST00000195446	antisense		3	1	26331951	649
ENSMUSG00000034917	protein_coding	Tjp3	ENSMUST00000218966	retained_intron		10	-1	81285781	467
ENSMUSG00000051727	protein_coding	Kctd14	ENSMUST00000143321	nonsense_mediated_decay		7	1	97453204	2340
ENSMUSG00000078586	unprocessed_pseudogene	Gm11735	ENSMUST00000106377	unprocessed_pseudogene		11	-1	116749833	1581
ENSMUSG00000030682	protein_coding	Cdipt	ENSMUST00000205830	protein_coding		7	1	126976853	805
ENSMUSG00000074664	antisense	A830092H15Rik	ENSMUST00000099182	antisense		3	1	26331150	1229
ENSMUSG00000091370	processed_transcript	5730435O14Rik	ENSMUST00000170047	antisense		10	1	41568016	617
ENSMUSG00000030682	protein_coding	Cdipt	ENSMUST00000206964	retained_intron		7	1	126978233	419
ENSMUSG00000100565	lincRNA	Gm28091	ENSMUST00000190912	lincRNA		Y	1	30423567	437
ENSMUSG00000091370	processed_transcript	5730435O14Rik	ENSMUST00000165647	retained_intron		10	1	41575564	582
ENSMUSG00000071657	protein_coding	Bscl2	ENSMUST00000160556	protein_coding	alternative2	19	1	8839328	1795
ENSMUSG00000051727	protein_coding	Kctd14	ENSMUST00000206279	protein_coding	alternative2	7	1	97453222	2203
ENSMUSG00000100565	lincRNA	Gm28091	ENSMUST00000188421	lincRNA		Y	1	30423567	622
ENSMUSG00000093445	protein_coding	Lrch4	ENSMUST00000176988	retained_intron		5	1	137629143	891
ENSMUSG00000114662	antisense	Gm31683	ENSMUST00000224935	antisense		13	-1	40917895	887
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000132025	retained_intron		1	-1	134955928	3213
ENSMUSG00000107703	TEC	Gm44039	ENSMUST00000204192	TEC		6	1	15636124	2246
ENSMUSG00000090708	antisense	Gm17196	ENSMUST00000164074	antisense		10	1	41553762	345
ENSMUSG00000111376	processed_pseudogene	Gm47099	ENSMUST00000214137	processed_pseudogene		10	-1	41686056	286
ENSMUSG00000114723	TEC	5530402G07Rik	ENSMUST00000223891	TEC		13	-1	40949631	743
ENSMUSG00000051596	protein_coding	Otop1	ENSMUST00000185357	processed_transcript		5	1	38277404	3151
ENSMUSG00000093445	protein_coding	Lrch4	ENSMUST00000177477	nonsense_mediated_decay		5	1	137629152	928
ENSMUSG00000051596	protein_coding	Otop1	ENSMUST00000187863	processed_transcript		5	1	38286023	2084
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000112163	protein_coding		1	-1	134955942	828
ENSMUSG00000037370	protein_coding	Enpp1	ENSMUST00000105520	protein_coding	principal3	10	-1	24712158	6777
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000164110	retained_intron		6	1	4903432	9395
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000086444	protein_coding	principal2	1	-1	134955940	3137
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000177338	protein_coding		6	1	4903788	1680
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000177153	nonsense_mediated_decay		6	1	4905416	3834
ENSMUSG00000037482	protein_coding	Erv3	ENSMUST00000040941	protein_coding	principal1	2	-1	131859747	3378
ENSMUSG00000051727	protein_coding	Kctd14	ENSMUST00000050732	protein_coding	alternative2	7	1	97453204	2343
ENSMUSG00000093445	protein_coding	Lrch4	ENSMUST00000176011	nonsense_mediated_decay		5	1	137629178	637
ENSMUSG00000021140	protein_coding	Pcnx	ENSMUST00000221721	protein_coding	alternative2	12	1	81860023	8318
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000177456	protein_coding	alternative2	6	1	4905416	3975
ENSMUSG00000051727	protein_coding	Kctd14	ENSMUST00000205577	protein_coding	alternative2	7	1	97453204	2310
ENSMUSG00000073557	protein_coding	Ppp1r12b	ENSMUST00000168381	protein_coding	principal2	1	-1	134955851	3621
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000176729	nonsense_mediated_decay		6	1	4906407	3046
ENSMUSG00000081229	processed_pseudogene	Lamr1-ps1	ENSMUST00000119759	processed_pseudogene		2	1	131904086	874
ENSMUSG00000103976	TEC	Gm37677	ENSMUST00000194520	TEC		1	-1	134827549	7634
ENSMUSG00000104319	IG_V_pseudogene	Ighv5-19	ENSMUST00000193466	IG_V_pseudogene		12	-1	113885057	297
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000176136	processed_transcript		6	1	5110659	357
ENSMUSG00000029635	protein_coding	Cdk8	ENSMUST00000162494	nonsense_mediated_decay		5	1	146231230	2973
ENSMUSG00000063887	protein_coding	Nlgn1	ENSMUST00000193603	protein_coding	principal3	3	-1	26332460	11807
ENSMUSG00000093445	protein_coding	Lrch4	ENSMUST00000176667	protein_coding	alternative2	5	1	137629178	2209
ENSMUSG00000032827	protein_coding	Ppp1r9a	ENSMUST00000065842	retained_intron		6	1	5113459	885
ENSMUSG00000093445	protein_coding	Lrch4	ENSMUST00000175968	protein_coding	alternative2	5	1	137630130	2036
ENSMUSG00000097396	TEC	Gm26556	ENSMUST00000180645	TEC		6	1	4958983	320
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000159978	processed_transcript		10	-1	41552849	1084
ENSMUSG00000063887	protein_coding	Nlgn1	ENSMUST00000191835	protein_coding	alternative1	3	-1	26153307	3013
ENSMUSG00000047507	protein_coding	Baiap3	ENSMUST00000182126	retained_intron		17	-1	25244033	1295
ENSMUSG00000093445	protein_coding	Lrch4	ENSMUST00000176871	protein_coding		5	1	137638320	237
ENSMUSG00000026452	protein_coding	Syt2	ENSMUST00000187725	protein_coding		1	1	134646677	383
ENSMUSG00000063887	protein_coding	Nlgn1	ENSMUST00000192774	retained_intron		3	-1	26331870	3327
ENSMUSG00000060332	protein_coding	Tmc2	ENSMUST00000077988	protein_coding	principal1	2	1	130195194	3216
ENSMUSG00000093445	protein_coding	Lrch4	ENSMUST00000176768	protein_coding		5	1	137639366	784
ENSMUSG00000096706	protein_coding	Gm21854	ENSMUST00000190391	protein_coding	principal1	Y	1	5656986	1480
ENSMUSG00000096706	protein_coding	Gm21854	ENSMUST00000179901	protein_coding		Y	1	5658985	471
ENSMUSG00000063887	protein_coding	Nlgn1	ENSMUST00000108308	protein_coding	alternative1	3	-1	26133734	4272
ENSMUSG00000060332	protein_coding	Tmc2	ENSMUST00000166774	protein_coding	principal1	2	1	130196543	2667
ENSMUSG00000101805	processed_pseudogene	Gm28768	ENSMUST00000189034	processed_pseudogene		Y	1	5682517	378
ENSMUSG00000101380	unprocessed_pseudogene	Gm28769	ENSMUST00000190176	unprocessed_pseudogene		Y	1	5695785	615
ENSMUSG00000081913	processed_pseudogene	Gm11803	ENSMUST00000119966	processed_pseudogene		4	-1	6508384	444
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000073161	protein_coding	alternative2	5	-1	134456688	3572
ENSMUSG00000063887	protein_coding	Nlgn1	ENSMUST00000075054	protein_coding	principal3	3	-1	26133734	4359
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000147226	retained_intron		5	1	81020138	2728
ENSMUSG00000096268	protein_coding	Gm20914	ENSMUST00000188887	protein_coding	principal1	Y	1	5725978	1228
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202104	protein_coding		5	-1	134363276	676
ENSMUSG00000056032	antisense	BC018473	ENSMUST00000156293	antisense		11	1	116752167	4753
ENSMUSG00000021140	protein_coding	Pcnx	ENSMUST00000222005	nonsense_mediated_decay		12	1	81860341	7827
ENSMUSG00000051596	protein_coding	Otop1	ENSMUST00000114099	protein_coding	principal5	5	1	38277404	3141
ENSMUSG00000096268	protein_coding	Gm20914	ENSMUST00000180372	protein_coding	principal1	Y	1	5727496	684
ENSMUSG00000071657	protein_coding	Bscl2	ENSMUST00000159571	retained_intron		19	1	8839373	2806
ENSMUSG00000049916	protein_coding	2610318N02Rik	ENSMUST00000093336	protein_coding	principal1	16	-1	17125106	1266
ENSMUSG00000021140	protein_coding	Pcnx	ENSMUST00000221675	protein_coding		12	1	81918643	4812
ENSMUSG00000081388	processed_pseudogene	Gm11801	ENSMUST00000117807	processed_pseudogene		4	1	6539561	746
ENSMUSG00000021140	protein_coding	Pcnx	ENSMUST00000222828	retained_intron		12	1	81963647	3147
ENSMUSG00000021140	protein_coding	Pcnx	ENSMUST00000222908	retained_intron		12	1	81973187	347
ENSMUSG00000033520	protein_coding	Idi2	ENSMUST00000038598	protein_coding	principal1	13	1	8952863	2253
ENSMUSG00000049916	protein_coding	2610318N02Rik	ENSMUST00000231681	protein_coding	principal1	16	-1	17125140	1156
ENSMUSG00000051596	protein_coding	Otop1	ENSMUST00000063136	protein_coding	alternative2	5	1	38275972	3106
ENSMUSG00000021140	protein_coding	Pcnx	ENSMUST00000221472	retained_intron		12	1	81991749	370
ENSMUSG00000113716	lincRNA	Gm47518	ENSMUST00000222118	lincRNA		12	-1	69120347	1739
ENSMUSG00000112673	processed_pseudogene	Gm7413	ENSMUST00000219498	processed_pseudogene		10	-1	59871682	462
ENSMUSG00000049916	protein_coding	2610318N02Rik	ENSMUST00000231630	retained_intron		16	-1	17117776	389
ENSMUSG00000037370	protein_coding	Enpp1	ENSMUST00000039882	nonsense_mediated_decay		10	-1	24712159	3231
ENSMUSG00000056032	antisense	BC018473	ENSMUST00000132056	antisense		11	1	116752169	1331
ENSMUSG00000113600	processed_pseudogene	Gm7868	ENSMUST00000223510	processed_pseudogene		12	1	69123101	680
ENSMUSG00000021140	protein_coding	Pcnx	ENSMUST00000222468	nonsense_mediated_decay		12	1	81995238	685
ENSMUSG00000056032	antisense	BC018473	ENSMUST00000145570	antisense		11	1	116752349	1136
ENSMUSG00000049916	protein_coding	2610318N02Rik	ENSMUST00000232615	retained_intron		16	-1	17118197	556
ENSMUSG00000056032	antisense	BC018473	ENSMUST00000147508	antisense		11	1	116752963	1409
ENSMUSG00000101489	unprocessed_pseudogene	Gm28090	ENSMUST00000189458	unprocessed_pseudogene		Y	1	30499157	664
ENSMUSG00000037370	protein_coding	Enpp1	ENSMUST00000135846	protein_coding	alternative2	10	-1	24711991	2721
ENSMUSG00000113158	lincRNA	Gm31447	ENSMUST00000222345	lincRNA		12	1	69129836	384
ENSMUSG00000083191	processed_pseudogene	Gm15571	ENSMUST00000119887	processed_pseudogene		12	-1	69142066	637
ENSMUSG00000081438	processed_pseudogene	Gm11254	ENSMUST00000122368	processed_pseudogene		4	1	74663683	653
ENSMUSG00000071657	protein_coding	Bscl2	ENSMUST00000160897	nonsense_mediated_decay		19	1	8839390	1646
ENSMUSG00000021140	protein_coding	Pcnx	ENSMUST00000021567	protein_coding	principal2	12	1	81860030	12139
ENSMUSG00000049916	protein_coding	2610318N02Rik	ENSMUST00000231558	protein_coding		16	-1	17121760	829
ENSMUSG00000028899	protein_coding	Taf12	ENSMUST00000030731	protein_coding	principal2	4	1	132274375	3787
ENSMUSG00000049916	protein_coding	2610318N02Rik	ENSMUST00000231297	protein_coding		16	-1	17121684	789
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000220297	protein_coding	principal1	10	1	81266960	2268
ENSMUSG00000001665	protein_coding	Gstt3	ENSMUST00000001715	protein_coding	principal1	10	-1	75781414	1880
ENSMUSG00000071657	protein_coding	Bscl2	ENSMUST00000086058	protein_coding	alternative2	19	1	8840519	1388
ENSMUSG00000029720	protein_coding	Gm20605	ENSMUST00000177545	nonsense_mediated_decay	principal1	5	1	137629175	4464
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202280	protein_coding		5	-1	134456576	3052
ENSMUSG00000113622	lincRNA	Gm49749	ENSMUST00000223212	lincRNA		12	1	82000268	652
ENSMUSG00000092190	processed_transcript	Gm20470	ENSMUST00000174654	processed_transcript		10	-1	7761099	331
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000200944	protein_coding		5	-1	134456576	3133
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000217754	processed_transcript		10	1	81266995	374
ENSMUSG00000028899	protein_coding	Taf12	ENSMUST00000124365	processed_transcript		4	1	132274413	241
ENSMUSG00000049916	protein_coding	2610318N02Rik	ENSMUST00000232601	retained_intron		16	-1	17121283	549
ENSMUSG00000116567	processed_pseudogene	Gm49639	ENSMUST00000231856	processed_pseudogene		16	-1	54350328	205
ENSMUSG00000116662	processed_pseudogene	Gm46541	ENSMUST00000232022	processed_pseudogene		16	-1	54583197	407
ENSMUSG00000049916	protein_coding	2610318N02Rik	ENSMUST00000231303	retained_intron		16	-1	17125167	647
ENSMUSG00000037370	protein_coding	Enpp1	ENSMUST00000150570	retained_intron		10	-1	24711997	2503
ENSMUSG00000001665	protein_coding	Gstt3	ENSMUST00000174649	processed_transcript		10	-1	75777260	600
ENSMUSG00000100434	processed_pseudogene	Gm3489	ENSMUST00000190083	processed_pseudogene		1	1	44839171	528
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000219304	protein_coding		10	1	81268185	565
ENSMUSG00000013766	protein_coding	Ly6g6e	ENSMUST00000172494	protein_coding		17	1	35076902	464
ENSMUSG00000116727	processed_pseudogene	Gm8881	ENSMUST00000231721	processed_pseudogene		16	-1	54827894	1397
ENSMUSG00000028899	protein_coding	Taf12	ENSMUST00000105963	protein_coding	alternative1	4	1	132274416	777
ENSMUSG00000037370	protein_coding	Enpp1	ENSMUST00000142974	retained_intron		10	-1	24674258	3638
ENSMUSG00000100013	processed_pseudogene	Gm19480	ENSMUST00000185547	processed_pseudogene		1	-1	44874152	667
ENSMUSG00000001665	protein_coding	Gstt3	ENSMUST00000173537	protein_coding		10	-1	75781018	687
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000218742	protein_coding		10	1	81268221	509
ENSMUSG00000081054	processed_pseudogene	Gm12025	ENSMUST00000117768	processed_pseudogene		11	-1	19361069	144
ENSMUSG00000001665	protein_coding	Gstt3	ENSMUST00000133869	protein_coding		10	-1	75776864	769
ENSMUSG00000101251	processed_pseudogene	Gm3496	ENSMUST00000188283	processed_pseudogene		1	-1	44924893	745
ENSMUSG00000071657	protein_coding	Bscl2	ENSMUST00000162580	retained_intron		19	1	8840535	3495
ENSMUSG00000047528	protein_coding	Flacc1	ENSMUST00000188772	protein_coding	alternative2	1	-1	58695989	1382
ENSMUSG00000071657	protein_coding	Bscl2	ENSMUST00000162071	retained_intron		19	1	8840535	1911
ENSMUSG00000082737	processed_pseudogene	Gm12026	ENSMUST00000120961	processed_pseudogene		11	1	19383685	1024
ENSMUSG00000033508	protein_coding	Asprv1	ENSMUST00000043400	protein_coding	principal1	6	1	86628164	1547
ENSMUSG00000001665	protein_coding	Gstt3	ENSMUST00000174187	nonsense_mediated_decay		10	-1	75781050	648
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000217688	processed_transcript		10	1	81269541	701
ENSMUSG00000028753	protein_coding	Vwa5b1	ENSMUST00000030533	protein_coding	principal1	4	-1	138624012	7486
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000100654	protein_coding		5	-1	134456584	3156
ENSMUSG00000071657	protein_coding	Bscl2	ENSMUST00000159653	nonsense_mediated_decay		19	1	8846190	685
ENSMUSG00000001665	protein_coding	Gstt3	ENSMUST00000218091	retained_intron		10	-1	75781401	1985
ENSMUSG00000109117	processed_pseudogene	Gm18393	ENSMUST00000208349	processed_pseudogene		8	1	8711484	1131
ENSMUSG00000017801	protein_coding	Mlx	ENSMUST00000107302	protein_coding	alternative1	11	1	101087277	1826
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000219460	protein_coding		10	1	81271006	717
ENSMUSG00000101937	processed_pseudogene	Gm5268	ENSMUST00000189212	processed_pseudogene		1	1	45178067	940
ENSMUSG00000076665	IG_V_gene	Ighv7-1	ENSMUST00000103474	IG_V_gene	principal1	12	-1	113896946	363
ENSMUSG00000028753	protein_coding	Vwa5b1	ENSMUST00000137206	protein_coding		4	-1	138581083	512
ENSMUSG00000017801	protein_coding	Mlx	ENSMUST00000107303	protein_coding	alternative1	11	1	101087277	1736
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000219919	retained_intron		10	1	81271069	680
ENSMUSG00000026452	protein_coding	Syt2	ENSMUST00000188842	protein_coding	principal1	1	1	134646681	3386
ENSMUSG00000092360	protein_coding	Gm20441	ENSMUST00000173512	protein_coding	principal1	10	-1	75780954	756
ENSMUSG00000013766	protein_coding	Ly6g6e	ENSMUST00000172678	protein_coding	principal2	17	1	35076931	750
ENSMUSG00000076653	IG_V_gene	Ighv7-2	ENSMUST00000193133	IG_V_gene	principal5	12	-1	113912483	357
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000219294	retained_intron		10	1	81271104	714
ENSMUSG00000071657	protein_coding	Bscl2	ENSMUST00000171649	protein_coding	principal3	19	1	8837467	1962
ENSMUSG00000086911	lincRNA	Gm12027	ENSMUST00000146531	lincRNA		11	-1	19628061	949
ENSMUSG00000076653	IG_V_gene	Ighv7-2	ENSMUST00000103462	IG_V_gene	alternative2	12	-1	113912483	354
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000218297	protein_coding		10	1	81272618	500
ENSMUSG00000021360	protein_coding	Gcnt2	ENSMUST00000110191	protein_coding	alternative2	13	1	40859754	4352
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000218146	retained_intron		10	1	81272747	401
ENSMUSG00000047528	protein_coding	Flacc1	ENSMUST00000191565	protein_coding	alternative2	1	-1	58692442	1489
ENSMUSG00000026452	protein_coding	Syt2	ENSMUST00000121990	protein_coding	principal1	1	1	134709300	6879
ENSMUSG00000028753	protein_coding	Vwa5b1	ENSMUST00000105812	nonsense_mediated_decay		4	-1	138635884	2400
ENSMUSG00000004931	protein_coding	Apba3	ENSMUST00000057798	protein_coding	principal1	10	1	81268172	2106
ENSMUSG00000013766	protein_coding	Ly6g6e	ENSMUST00000013910	protein_coding	principal2	17	1	35076937	1142
ENSMUSG00000017801	protein_coding	Mlx	ENSMUST00000149411	processed_transcript		11	1	101087290	679
ENSMUSG00000100219	lincRNA	1700054K19Rik	ENSMUST00000186102	lincRNA		6	1	112210708	452
ENSMUSG00000089687	protein_coding	Rab42	ENSMUST00000040411	protein_coding	principal1	4	-1	132303385	761
ENSMUSG00000026452	protein_coding	Syt2	ENSMUST00000187702	processed_transcript		1	1	134748577	485
ENSMUSG00000047528	protein_coding	Flacc1	ENSMUST00000055313	protein_coding	principal3	1	-1	58695953	1540
ENSMUSG00000017801	protein_coding	Mlx	ENSMUST00000145187	processed_transcript		11	1	101087290	667
ENSMUSG00000104542	IG_V_pseudogene	Ighv8-15	ENSMUST00000197770	IG_V_pseudogene		12	-1	115844309	294
ENSMUSG00000013766	protein_coding	Ly6g6e	ENSMUST00000172959	protein_coding	alternative2	17	1	35077155	501
ENSMUSG00000028753	protein_coding	Vwa5b1	ENSMUST00000154312	processed_transcript		4	-1	138606530	649
ENSMUSG00000021360	protein_coding	Gcnt2	ENSMUST00000069958	protein_coding	principal3	13	1	40887193	3929
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000189488	protein_coding	principal5	10	-1	41716634	7260
ENSMUSG00000101168	antisense	Gm28892	ENSMUST00000188123	antisense		1	1	134834142	2721
ENSMUSG00000028753	protein_coding	Vwa5b1	ENSMUST00000133319	processed_transcript		4	-1	138606999	630
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000111245	protein_coding	alternative2	5	-1	134456589	3299
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000095227	protein_coding		10	-1	41579207	1393
ENSMUSG00000103614	TEC	Gm37949	ENSMUST00000192808	TEC		1	-1	134801985	2091
ENSMUSG00000025418	protein_coding	Bsnd	ENSMUST00000054472	protein_coding	principal1	4	-1	106492283	2756
ENSMUSG00000116814	lincRNA	Gm49636	ENSMUST00000232037	lincRNA		16	-1	29754312	2540
ENSMUSG00000107803	unprocessed_pseudogene	Olfr778-ps1	ENSMUST00000204517	unprocessed_pseudogene		10	-1	129288999	207
ENSMUSG00000087362	lincRNA	Gm13710	ENSMUST00000126679	lincRNA		2	-1	84506873	818
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202829	protein_coding		5	-1	134377024	1080
ENSMUSG00000097307	lincRNA	Gm26834	ENSMUST00000181815	lincRNA		16	1	29811058	950
ENSMUSG00000087362	lincRNA	Gm13710	ENSMUST00000139492	lincRNA		2	-1	84531322	529
ENSMUSG00000116891	lincRNA	Gm32679	ENSMUST00000232318	lincRNA		16	-1	29834728	503
ENSMUSG00000044537	polymorphic_pseudogene	Olfr779	ENSMUST00000222301	polymorphic_pseudogene	principal5	10	1	129311180	929
ENSMUSG00000110445	TEC	Gm45747	ENSMUST00000212203	TEC		8	1	119714454	999
ENSMUSG00000044537	polymorphic_pseudogene	Olfr779	ENSMUST00000069063	protein_coding	alternative2	10	1	129311509	390
ENSMUSG00000017801	protein_coding	Mlx	ENSMUST00000017945	protein_coding	principal3	11	1	101087300	1965
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000160002	retained_intron		10	-1	41560676	2780
ENSMUSG00000040648	protein_coding	Ppip5k2	ENSMUST00000137758	retained_intron		1	-1	97715149	4055
ENSMUSG00000085933	protein_coding	Tmem61	ENSMUST00000238833	protein_coding	principal5	4	-1	106505855	990
ENSMUSG00000085933	protein_coding	Tmem61	ENSMUST00000239042	processed_transcript		4	-1	106534997	676
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000159868	retained_intron		10	-1	41553417	703
ENSMUSG00000047528	protein_coding	Flacc1	ENSMUST00000191252	nonsense_mediated_decay		1	-1	58692442	1242
ENSMUSG00000073413	protein_coding	Ly6g6d	ENSMUST00000007259	protein_coding	principal1	17	-1	35074500	546
ENSMUSG00000085933	protein_coding	Tmem61	ENSMUST00000148907	nonsense_mediated_decay		4	-1	106506335	4006
ENSMUSG00000017801	protein_coding	Mlx	ENSMUST00000149597	protein_coding		11	1	101087304	403
ENSMUSG00000085933	protein_coding	Tmem61	ENSMUST00000239147	protein_coding		4	-1	106540546	1165
ENSMUSG00000017801	protein_coding	Mlx	ENSMUST00000143344	processed_transcript		11	1	101089662	618
ENSMUSG00000085933	protein_coding	Tmem61	ENSMUST00000239070	nonsense_mediated_decay		4	-1	106506340	1385
ENSMUSG00000021360	protein_coding	Gcnt2	ENSMUST00000067778	protein_coding		13	1	40917601	4038
ENSMUSG00000085933	protein_coding	Tmem61	ENSMUST00000239122	retained_intron		4	-1	106506340	2487
ENSMUSG00000085933	protein_coding	Tmem61	ENSMUST00000177702	protein_coding	alternative2	4	-1	106503105	561
ENSMUSG00000021136	protein_coding	Smoc1	ENSMUST00000110347	protein_coding		12	1	81026808	3496
ENSMUSG00000047528	protein_coding	Flacc1	ENSMUST00000185953	retained_intron		1	-1	58695960	1979
ENSMUSG00000118551	processed_transcript	AL954352.1	ENSMUST00000238873	processed_transcript		4	-1	106505961	960
ENSMUSG00000118551	processed_transcript	AL954352.1	ENSMUST00000238822	processed_transcript		4	-1	106540536	911
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000160751	processed_transcript		10	-1	41587753	668
ENSMUSG00000021360	protein_coding	Gcnt2	ENSMUST00000225759	protein_coding		13	1	40917650	1366
ENSMUSG00000047528	protein_coding	Flacc1	ENSMUST00000188839	retained_intron		1	-1	58691050	627
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000187853	processed_transcript		10	-1	41612837	548
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000190522	protein_coding	alternative2	10	-1	41694487	1810
ENSMUSG00000102059	transcribed_unprocessed_pseudogene	Gm20257	ENSMUST00000185352	processed_transcript		1	1	58652641	936
ENSMUSG00000021360	protein_coding	Gcnt2	ENSMUST00000223570	protein_coding		13	1	40946732	335
ENSMUSG00000040935	protein_coding	Padi6	ENSMUST00000038749	protein_coding	principal1	4	-1	140742643	2333
ENSMUSG00000073413	protein_coding	Ly6g6d	ENSMUST00000172639	processed_transcript		17	-1	35078065	690
ENSMUSG00000102059	transcribed_unprocessed_pseudogene	Gm20257	ENSMUST00000188643	transcribed_unprocessed_pseudogene		1	1	58654945	130
ENSMUSG00000110944	processed_pseudogene	Gm19174	ENSMUST00000216944	processed_pseudogene		9	1	18400542	956
ENSMUSG00000021360	protein_coding	Gcnt2	ENSMUST00000225996	retained_intron		13	1	40953415	334
ENSMUSG00000073413	protein_coding	Ly6g6d	ENSMUST00000172903	retained_intron		17	-1	35074464	505
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000099932	protein_coding		10	-1	41709300	2742
ENSMUSG00000059647	processed_pseudogene	Cbx3-ps7	ENSMUST00000081455	processed_pseudogene		1	1	58646688	552
ENSMUSG00000040935	protein_coding	Padi6	ENSMUST00000130267	protein_coding		4	-1	140741647	649
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000074114	protein_coding		5	-1	134456576	3330
ENSMUSG00000073413	protein_coding	Ly6g6d	ENSMUST00000173120	retained_intron		17	-1	35078065	667
ENSMUSG00000019794	protein_coding	Katna1	ENSMUST00000019929	protein_coding	alternative1	10	1	7726000	1774
ENSMUSG00000073413	protein_coding	Ly6g6d	ENSMUST00000172745	processed_transcript		17	-1	35078056	404
ENSMUSG00000040935	protein_coding	Padi6	ENSMUST00000125046	processed_transcript		4	-1	140733043	256
ENSMUSG00000086693	antisense	A730081D07Rik	ENSMUST00000153685	antisense		13	-1	41001151	1804
ENSMUSG00000018841	protein_coding	Rad51d	ENSMUST00000018985	protein_coding	principal1	11	-1	82890614	3426
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202554	protein_coding	alternative2	5	-1	134456589	3514
ENSMUSG00000114672	TEC	Gm48192	ENSMUST00000225988	TEC		13	-1	40874189	692
ENSMUSG00000071659	protein_coding	Hnrnpul2	ENSMUST00000096753	protein_coding	principal1	19	1	8820010	5118
ENSMUSG00000019794	protein_coding	Katna1	ENSMUST00000173400	nonsense_mediated_decay		10	1	7726008	683
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000019955	protein_coding		10	-1	41709297	1891
ENSMUSG00000114601	processed_pseudogene	Gm48188	ENSMUST00000225964	processed_pseudogene		13	-1	40912207	704
ENSMUSG00000018841	protein_coding	Rad51d	ENSMUST00000092844	protein_coding		11	-1	82890589	1228
ENSMUSG00000075225	protein_coding	Ccdc162	ENSMUST00000219054	protein_coding		10	-1	41611319	3182
ENSMUSG00000071659	protein_coding	Hnrnpul2	ENSMUST00000237237	retained_intron		19	1	8820272	2689
ENSMUSG00000019794	protein_coding	Katna1	ENSMUST00000172400	retained_intron		10	1	7748875	825
ENSMUSG00000018841	protein_coding	Rad51d	ENSMUST00000135963	nonsense_mediated_decay		11	-1	82890589	1292
ENSMUSG00000018841	protein_coding	Rad51d	ENSMUST00000021033	protein_coding		11	-1	82890589	1201
ENSMUSG00000019794	protein_coding	Katna1	ENSMUST00000174007	protein_coding		10	1	7759772	462
ENSMUSG00000018841	protein_coding	Rad51d	ENSMUST00000100718	nonsense_mediated_decay		11	-1	82890589	1386
ENSMUSG00000038393	protein_coding	Txnip	ENSMUST00000074519	protein_coding	alternative2	3	1	96557957	2827
ENSMUSG00000019794	protein_coding	Katna1	ENSMUST00000173511	protein_coding		10	1	7761233	488
ENSMUSG00000003032	protein_coding	Klf4	ENSMUST00000132746	protein_coding		4	-1	55532453	859
ENSMUSG00000021457	protein_coding	Syk	ENSMUST00000120135	protein_coding	principal2	13	1	52583173	5363
ENSMUSG00000100634	protein_coding	Gm28171	ENSMUST00000190100	protein_coding	principal1	Y	1	5793395	1226
ENSMUSG00000029635	protein_coding	Cdk8	ENSMUST00000161181	protein_coding		5	1	146231250	2467
ENSMUSG00000019794	protein_coding	Katna1	ENSMUST00000165806	protein_coding	principal2	10	1	7726000	1775
ENSMUSG00000003032	protein_coding	Klf4	ENSMUST00000129250	protein_coding		4	-1	55531770	522
ENSMUSG00000035790	protein_coding	Cep19	ENSMUST00000115168	protein_coding	principal1	16	1	32099800	1718
ENSMUSG00000071658	protein_coding	Gng3	ENSMUST00000096259	protein_coding	principal1	19	-1	8839194	1643
ENSMUSG00000044749	protein_coding	Abca6	ENSMUST00000044003	protein_coding	principal1	11	-1	110251776	5240
ENSMUSG00000100038	lincRNA	Gm29580	ENSMUST00000189921	lincRNA		Y	1	30542567	166
ENSMUSG00000100056	lincRNA	Gm28173	ENSMUST00000191190	lincRNA		Y	-1	5902813	1496
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000132375	nonsense_mediated_decay		5	1	81020571	6793
ENSMUSG00000035790	protein_coding	Cep19	ENSMUST00000042869	protein_coding	principal1	16	1	32099952	1567
ENSMUSG00000021136	protein_coding	Smoc1	ENSMUST00000021564	protein_coding		12	1	81026828	3439
ENSMUSG00000118124	protein_coding	Gm50139	ENSMUST00000237654	nonsense_mediated_decay	principal1	19	1	8829773	599
ENSMUSG00000102338	TEC	Gm37236	ENSMUST00000193670	TEC		Y	-1	5915279	3249
ENSMUSG00000035790	protein_coding	Cep19	ENSMUST00000169186	protein_coding	principal1	16	1	32103878	1320
ENSMUSG00000021136	protein_coding	Smoc1	ENSMUST00000129362	protein_coding	principal1	12	1	81026828	3385
ENSMUSG00000029635	protein_coding	Cdk8	ENSMUST00000161652	protein_coding		5	1	146231288	1142
ENSMUSG00000086146	lincRNA	Gm15729	ENSMUST00000125829	lincRNA		16	1	32108865	360
ENSMUSG00000021457	protein_coding	Syk	ENSMUST00000055087	protein_coding	principal2	13	1	52596853	5122
ENSMUSG00000038393	protein_coding	Txnip	ENSMUST00000049093	protein_coding	principal3	3	1	96557960	2795
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000100652	protein_coding	principal4	5	-1	134456692	3693
ENSMUSG00000021457	protein_coding	Syk	ENSMUST00000118756	protein_coding	alternative2	13	1	52583437	2519
ENSMUSG00000052593	protein_coding	Adam17	ENSMUST00000101551	protein_coding		12	-1	21373593	4469
ENSMUSG00000044749	protein_coding	Abca6	ENSMUST00000150988	processed_transcript		11	-1	110251776	1493
ENSMUSG00000038393	protein_coding	Txnip	ENSMUST00000151832	retained_intron		3	1	96559498	424
ENSMUSG00000072616	unprocessed_pseudogene	Gm7853	ENSMUST00000100708	unprocessed_pseudogene		14	-1	36090816	478
ENSMUSG00000038393	protein_coding	Txnip	ENSMUST00000196871	processed_transcript		3	1	96559511	694
ENSMUSG00000079037	protein_coding	Prnp	ENSMUST00000091288	protein_coding	principal1	2	1	131909928	2184
ENSMUSG00000038393	protein_coding	Txnip	ENSMUST00000144639	processed_transcript		3	1	96559723	599
ENSMUSG00000040866	protein_coding	Rsph6a	ENSMUST00000035521	protein_coding	principal1	7	1	19054690	2354
ENSMUSG00000038393	protein_coding	Txnip	ENSMUST00000128221	retained_intron		3	1	96560054	393
ENSMUSG00000079037	protein_coding	Prnp	ENSMUST00000142070	processed_transcript		2	1	131909942	319
ENSMUSG00000029635	protein_coding	Cdk8	ENSMUST00000031640	protein_coding	principal1	5	1	146231288	2973
ENSMUSG00000003032	protein_coding	Klf4	ENSMUST00000107619	protein_coding	principal1	4	-1	55532466	3029
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000149280	retained_intron		5	1	81020752	3138
ENSMUSG00000029635	protein_coding	Cdk8	ENSMUST00000159467	protein_coding		5	1	146231385	654
ENSMUSG00000074398	antisense	Gm15441	ENSMUST00000098839	antisense		3	-1	96557815	659
ENSMUSG00000040866	protein_coding	Rsph6a	ENSMUST00000076887	protein_coding		7	1	19054699	1580
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000136104	retained_intron		5	1	81020755	3140
ENSMUSG00000096405	protein_coding	4930474N05Rik	ENSMUST00000226305	protein_coding	principal1	14	1	36094917	2313
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000148923	retained_intron		5	1	81020996	614
ENSMUSG00000098754	protein_coding	Prn	ENSMUST00000124100	protein_coding	principal1	2	1	131909957	2132
ENSMUSG00000029635	protein_coding	Cdk8	ENSMUST00000195944	retained_intron		5	1	146257793	2195
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000140356	retained_intron		5	1	81021199	3287
ENSMUSG00000040866	protein_coding	Rsph6a	ENSMUST00000144991	processed_transcript		7	1	19057395	636
ENSMUSG00000098754	protein_coding	Prn	ENSMUST00000136783	protein_coding	principal1	2	1	131909957	3370
ENSMUSG00000001348	protein_coding	Acp5	ENSMUST00000069330	protein_coding	principal1	9	-1	22131815	1356
ENSMUSG00000074398	antisense	Gm15441	ENSMUST00000107095	antisense		3	-1	96566801	1653
ENSMUSG00000029635	protein_coding	Cdk8	ENSMUST00000198861	processed_transcript		5	1	146286176	3896
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000139074	nonsense_mediated_decay		4	1	132535550	609
ENSMUSG00000084393	processed_pseudogene	Gm14101	ENSMUST00000121502	processed_pseudogene		2	-1	132981168	473
ENSMUSG00000096405	protein_coding	4930474N05Rik	ENSMUST00000186722	nonsense_mediated_decay		14	1	36094967	1602
ENSMUSG00000109190	lincRNA	Gm44621	ENSMUST00000207643	lincRNA		8	-1	8721308	1166
ENSMUSG00000096405	protein_coding	4930474N05Rik	ENSMUST00000177985	nonsense_mediated_decay		14	1	36094969	740
ENSMUSG00000082100	processed_pseudogene	Glns-ps1	ENSMUST00000120291	processed_pseudogene		11	1	19720355	1118
ENSMUSG00000001348	protein_coding	Acp5	ENSMUST00000165735	protein_coding	principal1	9	-1	22135711	1376
ENSMUSG00000029635	protein_coding	Cdk8	ENSMUST00000159615	retained_intron		5	1	146294910	1976
ENSMUSG00000019303	protein_coding	Psmc3ip	ENSMUST00000019447	protein_coding	principal1	11	-1	101095436	1291
ENSMUSG00000109062	lincRNA	Gm44622	ENSMUST00000209128	lincRNA		8	1	8735970	1033
ENSMUSG00000031749	protein_coding	St3gal2	ENSMUST00000117534	protein_coding		8	1	110919922	2177
ENSMUSG00000001348	protein_coding	Acp5	ENSMUST00000213815	protein_coding	principal1	9	-1	22131653	1419
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000134509	retained_intron		5	1	136083954	3396
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000100650	protein_coding	alternative2	5	-1	134456586	3487
ENSMUSG00000029635	protein_coding	Cdk8	ENSMUST00000160924	retained_intron		5	1	146296365	777
ENSMUSG00000080957	processed_pseudogene	Gm15739	ENSMUST00000118049	processed_pseudogene		5	1	146248551	872
ENSMUSG00000109371	lincRNA	Gm44626	ENSMUST00000207035	lincRNA		8	1	8727111	2715
ENSMUSG00000001348	protein_coding	Acp5	ENSMUST00000217643	protein_coding	principal1	9	-1	22131831	1447
ENSMUSG00000030432	protein_coding	Rpl28	ENSMUST00000032597	protein_coding	principal1	7	1	4792874	1106
ENSMUSG00000031549	protein_coding	Ido2	ENSMUST00000140417	processed_transcript		8	-1	24554597	3205
ENSMUSG00000083601	processed_pseudogene	Gm12028	ENSMUST00000118065	processed_pseudogene		11	-1	19750066	436
ENSMUSG00000024548	protein_coding	Setbp1	ENSMUST00000025430	protein_coding	principal1	18	-1	79109391	9953
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000201608	retained_intron		5	-1	134361140	288
ENSMUSG00000001348	protein_coding	Acp5	ENSMUST00000216684	processed_transcript		9	-1	22135691	399
ENSMUSG00000109346	lincRNA	Gm44515	ENSMUST00000209045	lincRNA		8	-1	8932699	379
ENSMUSG00000038683	protein_coding	Pak1ip1	ENSMUST00000046951	protein_coding	principal1	13	1	41001023	1722
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000125048	retained_intron		5	1	136083998	3967
ENSMUSG00000081820	processed_pseudogene	Gm12029	ENSMUST00000120073	processed_pseudogene		11	1	19783652	832
ENSMUSG00000034112	protein_coding	Atp2c2	ENSMUST00000095171	protein_coding	principal1	8	1	119700009	3222
ENSMUSG00000030432	protein_coding	Rpl28	ENSMUST00000078432	protein_coding	principal1	7	1	4792990	772
ENSMUSG00000001348	protein_coding	Acp5	ENSMUST00000115315	protein_coding	principal1	9	-1	22130598	1349
ENSMUSG00000030432	protein_coding	Rpl28	ENSMUST00000206617	retained_intron		7	1	4793397	335
ENSMUSG00000031749	protein_coding	St3gal2	ENSMUST00000034197	protein_coding	principal1	8	1	110919922	4396
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000135344	retained_intron		5	1	136083998	3057
ENSMUSG00000111856	processed_transcript	6530413G14Rik	ENSMUST00000215411	retained_intron		9	1	22117328	1474
ENSMUSG00000027338	protein_coding	Prnd	ENSMUST00000110170	protein_coding	principal1	2	1	131950861	1969
ENSMUSG00000034112	protein_coding	Atp2c2	ENSMUST00000212454	protein_coding		8	1	119700070	623
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000131353	retained_intron		5	1	136083999	722
ENSMUSG00000111856	processed_transcript	6530413G14Rik	ENSMUST00000214165	antisense		9	1	22117672	610
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000152723	retained_intron		5	1	136084018	3030
ENSMUSG00000030432	protein_coding	Rpl28	ENSMUST00000126794	protein_coding		7	1	4793593	312
ENSMUSG00000031749	protein_coding	St3gal2	ENSMUST00000129639	processed_transcript		8	1	110919958	581
ENSMUSG00000030432	protein_coding	Rpl28	ENSMUST00000129888	retained_intron		7	1	4793850	478
ENSMUSG00000031749	protein_coding	St3gal2	ENSMUST00000141464	processed_transcript		8	1	110931921	514
ENSMUSG00000085886	antisense	D030047H15Rik	ENSMUST00000148318	antisense		7	-1	4136926	2536
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000100570	protein_coding		5	1	136084032	2660
ENSMUSG00000050410	protein_coding	Tcf19	ENSMUST00000161012	protein_coding	principal1	17	-1	35516824	1665
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000174548	protein_coding	principal1	7	1	28808541	2679
ENSMUSG00000094509	IG_V_gene	Ighv14-1	ENSMUST00000103463	IG_V_gene	principal1	12	-1	113932382	351
ENSMUSG00000031749	protein_coding	St3gal2	ENSMUST00000138332	processed_transcript		8	1	110940904	452
ENSMUSG00000086844	processed_transcript	B230206H07Rik	ENSMUST00000134845	processed_transcript		7	-1	141365082	3269
ENSMUSG00000118587	unprocessed_pseudogene	AC132945.1	ENSMUST00000239383	unprocessed_pseudogene		8	-1	110951471	93
ENSMUSG00000086844	processed_transcript	B230206H07Rik	ENSMUST00000129373	processed_transcript		7	-1	141365110	2935
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000140972	retained_intron		5	1	136084089	2683
ENSMUSG00000019303	protein_coding	Psmc3ip	ENSMUST00000126386	retained_intron		11	-1	101095400	1030
ENSMUSG00000038683	protein_coding	Pak1ip1	ENSMUST00000173238	retained_intron		13	1	41001024	1155
ENSMUSG00000036376	protein_coding	Abt1	ENSMUST00000041782	protein_coding	principal1	13	-1	23423866	4456
ENSMUSG00000027466	protein_coding	Rbck1	ENSMUST00000109847	protein_coding	principal1	2	-1	152332412	2384
ENSMUSG00000076655	IG_V_gene	Ighv4-1	ENSMUST00000103464	IG_V_gene	principal1	12	-1	113948796	414
ENSMUSG00000019303	protein_coding	Psmc3ip	ENSMUST00000134520	retained_intron		11	-1	101094160	1115
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000125247	processed_transcript		5	1	136085070	371
ENSMUSG00000019303	protein_coding	Psmc3ip	ENSMUST00000142545	nonsense_mediated_decay		11	-1	101095376	664
ENSMUSG00000027338	protein_coding	Prnd	ENSMUST00000110172	protein_coding	principal1	2	1	131950862	3176
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000199502	retained_intron		5	1	136091102	1470
ENSMUSG00000050410	protein_coding	Tcf19	ENSMUST00000160885	protein_coding	principal1	17	-1	35516785	1732
ENSMUSG00000060860	protein_coding	Ube2s	ENSMUST00000205815	nonsense_mediated_decay		7	-1	4812351	1126
ENSMUSG00000108848	processed_transcript	4933430N04Rik	ENSMUST00000208031	lincRNA		8	-1	9132288	1146
ENSMUSG00000093838	IG_V_gene	Ighv3-1	ENSMUST00000103478	IG_V_gene	principal1	12	-1	113964818	350
ENSMUSG00000060860	protein_coding	Ube2s	ENSMUST00000206139	retained_intron		7	-1	4811119	4093
ENSMUSG00000108848	processed_transcript	4933430N04Rik	ENSMUST00000207701	retained_intron		8	-1	9132291	2869
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000145294	nonsense_mediated_decay		5	1	136095590	600
ENSMUSG00000052593	protein_coding	Adam17	ENSMUST00000127974	nonsense_mediated_decay		12	-1	21373593	4423
ENSMUSG00000052593	protein_coding	Adam17	ENSMUST00000145118	nonsense_mediated_decay		12	-1	21373593	4427
ENSMUSG00000109215	lincRNA	4930453L07Rik	ENSMUST00000209053	lincRNA		8	1	9144669	1439
ENSMUSG00000060860	protein_coding	Ube2s	ENSMUST00000079496	protein_coding	principal1	7	-1	4812590	1238
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000122887	protein_coding		5	1	136103894	681
ENSMUSG00000050410	protein_coding	Tcf19	ENSMUST00000159009	protein_coding		17	-1	35516820	982
ENSMUSG00000027338	protein_coding	Prnd	ENSMUST00000110171	protein_coding	principal1	2	1	131950862	1938
ENSMUSG00000027761	protein_coding	Aadac	ENSMUST00000194896	processed_transcript		3	1	60025717	585
ENSMUSG00000108220	TEC	Gm44056	ENSMUST00000204623	TEC		6	-1	128166922	1427
ENSMUSG00000004952	protein_coding	Rasa4	ENSMUST00000130598	retained_intron		5	1	136110932	485
ENSMUSG00000038683	protein_coding	Pak1ip1	ENSMUST00000174551	retained_intron		13	1	41001238	3136
ENSMUSG00000104393	IG_V_pseudogene	Gm37961	ENSMUST00000192729	IG_V_pseudogene		12	-1	113968852	299
ENSMUSG00000035397	protein_coding	Klf16	ENSMUST00000038558	protein_coding	principal1	10	-1	80577321	2674
ENSMUSG00000060860	protein_coding	Ube2s	ENSMUST00000205885	protein_coding		7	-1	4812124	518
ENSMUSG00000050410	protein_coding	Tcf19	ENSMUST00000162683	protein_coding		17	-1	35516547	873
ENSMUSG00000038683	protein_coding	Pak1ip1	ENSMUST00000174527	processed_transcript		13	1	41001260	331
ENSMUSG00000060860	protein_coding	Ube2s	ENSMUST00000206669	protein_coding		7	-1	4811906	338
ENSMUSG00000027338	protein_coding	Prnd	ENSMUST00000110169	protein_coding	principal1	2	1	131951037	1918
ENSMUSG00000118589	unprocessed_pseudogene	CR974473.1	ENSMUST00000239282	unprocessed_pseudogene		17	-1	35513665	67
ENSMUSG00000086656	antisense	Gm15701	ENSMUST00000129559	antisense		5	-1	136104436	573
ENSMUSG00000107879	translated_unprocessed_pseudogene	9330102E08Rik	ENSMUST00000204642	processed_transcript		6	-1	128183803	3843
ENSMUSG00000082940	processed_pseudogene	Gm14103	ENSMUST00000119075	processed_pseudogene		2	-1	133047552	366
ENSMUSG00000107879	translated_unprocessed_pseudogene	9330102E08Rik	ENSMUST00000239434	translated_unprocessed_pseudogene		6	-1	128172392	96
ENSMUSG00000027466	protein_coding	Rbck1	ENSMUST00000028964	protein_coding	principal1	2	-1	152332653	2252
ENSMUSG00000115046	lincRNA	Gm49302	ENSMUST00000228127	lincRNA		14	-1	47801465	586
ENSMUSG00000115310	lincRNA	Gm35360	ENSMUST00000226509	lincRNA		14	1	47805235	671
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000130150	processed_transcript		7	1	4119408	446
ENSMUSG00000115310	lincRNA	Gm35360	ENSMUST00000227155	lincRNA		14	1	47805313	487
ENSMUSG00000082265	processed_pseudogene	Gm15547	ENSMUST00000122152	processed_pseudogene		5	-1	121530895	333
ENSMUSG00000015889	protein_coding	Lta4h	ENSMUST00000016033	protein_coding	principal1	10	1	93453411	2029
ENSMUSG00000031549	protein_coding	Ido2	ENSMUST00000121992	protein_coding	principal1	8	-1	24576333	2452
ENSMUSG00000082760	processed_pseudogene	Gm15546	ENSMUST00000122095	processed_pseudogene		5	-1	121472388	826
ENSMUSG00000038683	protein_coding	Pak1ip1	ENSMUST00000174472	retained_intron		13	1	41001266	1757
ENSMUSG00000034617	protein_coding	Mtrr	ENSMUST00000045827	protein_coding	principal1	13	-1	68582121	3692
ENSMUSG00000056771	lincRNA	Gm10010	ENSMUST00000071101	lincRNA		6	-1	128200623	2346
ENSMUSG00000089975	transcribed_processed_pseudogene	Gm7420	ENSMUST00000162836	transcribed_processed_pseudogene		5	1	29217724	842
ENSMUSG00000115215	lincRNA	Gm41148	ENSMUST00000226126	lincRNA		14	-1	47805349	736
ENSMUSG00000115215	lincRNA	Gm41148	ENSMUST00000226360	lincRNA		14	-1	47805319	679
ENSMUSG00000107810	processed_pseudogene	Gm18609	ENSMUST00000203370	processed_pseudogene		6	1	128185277	3601
ENSMUSG00000031549	protein_coding	Ido2	ENSMUST00000138335	retained_intron		8	-1	24540796	849
ENSMUSG00000045078	protein_coding	Rnf216	ENSMUST00000053498	protein_coding	alternative2	5	-1	143112994	4474
ENSMUSG00000027466	protein_coding	Rbck1	ENSMUST00000131889	processed_transcript		2	-1	152327757	446
ENSMUSG00000052593	protein_coding	Adam17	ENSMUST00000064536	protein_coding	principal1	12	-1	21373632	4443
ENSMUSG00000050846	protein_coding	Zfp623	ENSMUST00000037260	protein_coding	principal1	15	1	75940952	2486
ENSMUSG00000015889	protein_coding	Lta4h	ENSMUST00000215224	retained_intron		10	1	93453451	629
ENSMUSG00000083689	processed_pseudogene	Gm14094	ENSMUST00000117717	processed_pseudogene		2	1	133199611	610
ENSMUSG00000027466	protein_coding	Rbck1	ENSMUST00000129590	processed_transcript		2	-1	152332384	657
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000173750	retained_intron		7	1	28808806	2275
ENSMUSG00000036882	protein_coding	Arhgap33	ENSMUST00000207860	protein_coding	principal3	7	-1	30535009	4396
ENSMUSG00000015889	protein_coding	Lta4h	ENSMUST00000215419	processed_transcript		10	1	93453451	687
ENSMUSG00000105340	protein_coding	Gm42878	ENSMUST00000125946	nonsense_mediated_decay	principal1	5	-1	121545482	4783
ENSMUSG00000031549	protein_coding	Ido2	ENSMUST00000138155	processed_transcript		8	-1	24554554	552
ENSMUSG00000015889	protein_coding	Lta4h	ENSMUST00000216146	retained_intron		10	1	93453451	3225
ENSMUSG00000094533	IG_V_gene	Ighv11-1	ENSMUST00000103466	IG_V_gene	principal1	12	-1	113982341	353
ENSMUSG00000106115	TEC	Gm43420	ENSMUST00000198012	TEC		5	1	121402658	1857
ENSMUSG00000052593	protein_coding	Adam17	ENSMUST00000232107	protein_coding		12	-1	21373539	834
ENSMUSG00000015889	protein_coding	Lta4h	ENSMUST00000216174	retained_intron		10	1	93471344	585
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202321	nonsense_mediated_decay		5	-1	134385071	1439
ENSMUSG00000036882	protein_coding	Arhgap33	ENSMUST00000208538	protein_coding	principal3	7	-1	30535012	4372
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202268	retained_intron		5	-1	134377078	630
ENSMUSG00000066176	lincRNA	Gm12511	ENSMUST00000135987	lincRNA		4	1	55563265	1603
ENSMUSG00000036882	protein_coding	Arhgap33	ENSMUST00000207858	protein_coding	alternative2	7	-1	30535060	4337
ENSMUSG00000086650	lincRNA	A430048G15Rik	ENSMUST00000149965	lincRNA		2	1	133432095	627
ENSMUSG00000082530	processed_pseudogene	Gm12168	ENSMUST00000119051	processed_pseudogene		11	-1	46451347	368
ENSMUSG00000027761	protein_coding	Aadac	ENSMUST00000029325	protein_coding	principal1	3	1	60031761	1324
ENSMUSG00000027466	protein_coding	Rbck1	ENSMUST00000130165	retained_intron		2	-1	152322997	1842
ENSMUSG00000115609	lincRNA	4930447J18Rik	ENSMUST00000228579	lincRNA		14	1	47898851	801
ENSMUSG00000052593	protein_coding	Adam17	ENSMUST00000232526	nonsense_mediated_decay		12	-1	21373523	2540
ENSMUSG00000036882	protein_coding	Arhgap33	ENSMUST00000208522	protein_coding		7	-1	30534997	781
ENSMUSG00000115609	lincRNA	4930447J18Rik	ENSMUST00000226143	lincRNA		14	1	47898851	745
ENSMUSG00000062438	protein_coding	Adam1b	ENSMUST00000079368	protein_coding	principal1	5	-1	121503435	3338
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000172529	protein_coding		7	1	28808808	1898
ENSMUSG00000015889	protein_coding	Lta4h	ENSMUST00000214527	retained_intron		10	1	93474235	690
ENSMUSG00000027761	protein_coding	Aadac	ENSMUST00000151605	retained_intron		3	1	60031876	340
ENSMUSG00000085375	lincRNA	Gm12506	ENSMUST00000123620	lincRNA		4	1	55605149	806
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202165	protein_coding		5	-1	134388461	579
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000172884	protein_coding		7	1	28809518	502
ENSMUSG00000045078	protein_coding	Rnf216	ENSMUST00000200607	protein_coding	principal3	5	-1	143112980	3704
ENSMUSG00000044055	protein_coding	Otos	ENSMUST00000053144	protein_coding	principal1	1	-1	92648841	704
ENSMUSG00000115609	lincRNA	4930447J18Rik	ENSMUST00000227343	lincRNA		14	1	47898853	836
ENSMUSG00000027466	protein_coding	Rbck1	ENSMUST00000145889	retained_intron		2	-1	152323498	862
ENSMUSG00000015889	protein_coding	Lta4h	ENSMUST00000216931	processed_transcript		10	1	93474918	540
ENSMUSG00000036882	protein_coding	Arhgap33	ENSMUST00000207637	retained_intron		7	-1	30528745	596
ENSMUSG00000052593	protein_coding	Adam17	ENSMUST00000141799	processed_transcript		12	-1	21329290	375
ENSMUSG00000036882	protein_coding	Arhgap33	ENSMUST00000208491	protein_coding		7	-1	30534565	822
ENSMUSG00000015889	protein_coding	Lta4h	ENSMUST00000217556	retained_intron		10	1	93482471	752
ENSMUSG00000027466	protein_coding	Rbck1	ENSMUST00000128645	retained_intron		2	-1	152324616	1595
ENSMUSG00000115609	lincRNA	4930447J18Rik	ENSMUST00000226469	lincRNA		14	1	47898909	593
ENSMUSG00000052593	protein_coding	Adam17	ENSMUST00000155115	retained_intron		12	-1	21344229	3456
ENSMUSG00000034617	protein_coding	Mtrr	ENSMUST00000223398	protein_coding	principal1	13	-1	68582104	3861
ENSMUSG00000029616	protein_coding	Erp29	ENSMUST00000153758	nonsense_mediated_decay		5	-1	121452487	4034
ENSMUSG00000044055	protein_coding	Otos	ENSMUST00000159803	retained_intron		1	-1	92648254	2990
ENSMUSG00000027466	protein_coding	Rbck1	ENSMUST00000144865	protein_coding		2	-1	152324364	700
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000174477	protein_coding		7	1	28810937	2180
ENSMUSG00000052593	protein_coding	Adam17	ENSMUST00000132339	retained_intron		12	-1	21332521	537
ENSMUSG00000036882	protein_coding	Arhgap33	ENSMUST00000208723	retained_intron		7	-1	30533401	726
ENSMUSG00000036882	protein_coding	Arhgap33	ENSMUST00000044338	protein_coding	principal3	7	-1	30534180	4280
ENSMUSG00000034617	protein_coding	Mtrr	ENSMUST00000223101	nonsense_mediated_decay		13	-1	68582113	2728
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000201495	nonsense_mediated_decay		5	-1	134388482	801
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000174755	retained_intron		7	1	28810940	2426
ENSMUSG00000087585	lincRNA	Gm14100	ENSMUST00000125575	lincRNA		2	1	133463118	651
ENSMUSG00000052593	protein_coding	Adam17	ENSMUST00000142092	nonsense_mediated_decay		12	-1	21373534	702
ENSMUSG00000034617	protein_coding	Mtrr	ENSMUST00000220544	protein_coding		13	-1	68566216	715
ENSMUSG00000114989	lincRNA	Gm49303	ENSMUST00000228393	lincRNA		14	1	47960019	442
ENSMUSG00000058622	processed_pseudogene	Gm5265	ENSMUST00000076828	processed_pseudogene		1	-1	169453869	342
ENSMUSG00000015970	protein_coding	Chdh	ENSMUST00000067620	protein_coding	principal1	14	1	30009023	5690
ENSMUSG00000030546	protein_coding	Plin1	ENSMUST00000205915	protein_coding	principal1	7	-1	79732787	2817
ENSMUSG00000115403	lincRNA	Gm49304	ENSMUST00000227382	lincRNA		14	-1	47993803	1278
ENSMUSG00000034617	protein_coding	Mtrr	ENSMUST00000222107	nonsense_mediated_decay		13	-1	68582149	636
ENSMUSG00000030546	protein_coding	Plin1	ENSMUST00000178257	protein_coding	principal1	7	-1	79732171	1841
ENSMUSG00000115425	lincRNA	Gm49305	ENSMUST00000227352	lincRNA		14	1	47993941	875
ENSMUSG00000034617	protein_coding	Mtrr	ENSMUST00000223055	retained_intron		13	-1	68581894	664
ENSMUSG00000039358	protein_coding	Drd5	ENSMUST00000041646	protein_coding	principal1	5	1	38319367	3152
ENSMUSG00000030546	protein_coding	Plin1	ENSMUST00000205553	protein_coding		7	-1	79723288	511
ENSMUSG00000009588	protein_coding	St6galnac1	ENSMUST00000009732	protein_coding	principal1	11	-1	116775507	2392
ENSMUSG00000034617	protein_coding	Mtrr	ENSMUST00000220973	protein_coding		13	-1	68581940	636
ENSMUSG00000015970	protein_coding	Chdh	ENSMUST00000125796	processed_transcript		14	1	30009171	383
ENSMUSG00000030546	protein_coding	Plin1	ENSMUST00000206083	protein_coding		7	-1	79729865	1082
ENSMUSG00000015970	protein_coding	Chdh	ENSMUST00000118917	protein_coding	principal1	14	1	30022633	3406
ENSMUSG00000034617	protein_coding	Mtrr	ENSMUST00000221259	protein_coding		13	-1	68582094	532
ENSMUSG00000030546	protein_coding	Plin1	ENSMUST00000205747	protein_coding		7	-1	79732835	647
ENSMUSG00000097029	antisense	Gm26560	ENSMUST00000181240	antisense		5	-1	38320897	2619
ENSMUSG00000034617	protein_coding	Mtrr	ENSMUST00000221800	retained_intron		13	-1	68582100	668
ENSMUSG00000031574	protein_coding	Star	ENSMUST00000210565	protein_coding		8	1	25806555	633
ENSMUSG00000030546	protein_coding	Plin1	ENSMUST00000205413	protein_coding		7	-1	79732903	1294
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000026577	protein_coding	principal1	7	1	141338880	3191
ENSMUSG00000030546	protein_coding	Plin1	ENSMUST00000032762	protein_coding	principal1	7	-1	79732776	1916
ENSMUSG00000029616	protein_coding	Erp29	ENSMUST00000130451	protein_coding	principal1	5	-1	121452506	5204
ENSMUSG00000045078	protein_coding	Rnf216	ENSMUST00000197296	nonsense_mediated_decay		5	-1	143098505	1938
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000160888	protein_coding		5	1	29195992	562
ENSMUSG00000107559	TEC	Gm44193	ENSMUST00000204822	TEC		6	1	112293231	2523
ENSMUSG00000029616	protein_coding	Erp29	ENSMUST00000052590	protein_coding		5	-1	121452496	1123
ENSMUSG00000045078	protein_coding	Rnf216	ENSMUST00000200430	nonsense_mediated_decay		5	-1	143098505	1775
ENSMUSG00000045078	protein_coding	Rnf216	ENSMUST00000199044	retained_intron		5	-1	143016774	1402
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000174882	nonsense_mediated_decay		7	1	28813345	1850
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000174396	retained_intron		7	1	28813378	504
ENSMUSG00000027358	protein_coding	Bmp2	ENSMUST00000028836	protein_coding	principal1	2	1	133552159	3555
ENSMUSG00000029616	protein_coding	Erp29	ENSMUST00000111802	nonsense_mediated_decay		5	-1	121452348	748
ENSMUSG00000000263	protein_coding	Glra1	ENSMUST00000108853	protein_coding		11	-1	55607733	1797
ENSMUSG00000045078	protein_coding	Rnf216	ENSMUST00000198190	retained_intron		5	-1	143112980	3148
ENSMUSG00000115060	lincRNA	Gm49306	ENSMUST00000228584	lincRNA		14	1	48047011	527
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000173818	retained_intron		7	1	28814824	644
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000172841	retained_intron		7	1	28815106	1087
ENSMUSG00000045078	protein_coding	Rnf216	ENSMUST00000197217	retained_intron		5	-1	143087827	534
ENSMUSG00000045078	protein_coding	Rnf216	ENSMUST00000198179	processed_transcript		5	-1	143112980	690
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000173578	retained_intron		7	1	28817834	768
ENSMUSG00000043943	protein_coding	Naalad2	ENSMUST00000172171	protein_coding		9	-1	18397538	4066
ENSMUSG00000062081	processed_pseudogene	Gm6055	ENSMUST00000180532	processed_pseudogene		14	-1	48079752	378
ENSMUSG00000045078	protein_coding	Rnf216	ENSMUST00000200002	processed_transcript		5	-1	143112982	679
ENSMUSG00000110354	lincRNA	Gm45686	ENSMUST00000210259	lincRNA		7	1	138413614	460
ENSMUSG00000110354	lincRNA	Gm45686	ENSMUST00000211580	lincRNA		7	1	138413777	1138
ENSMUSG00000031574	protein_coding	Star	ENSMUST00000033979	protein_coding	principal1	8	1	25808474	4046
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000174526	retained_intron		7	1	28821213	672
ENSMUSG00000050271	protein_coding	Prag1	ENSMUST00000110492	protein_coding	principal1	8	1	36094828	4780
ENSMUSG00000015165	protein_coding	Hnrnpl	ENSMUST00000038572	protein_coding	principal1	7	1	28810890	2142
ENSMUSG00000043943	protein_coding	Naalad2	ENSMUST00000166825	protein_coding	principal1	9	-1	18386036	2799
ENSMUSG00000050271	protein_coding	Prag1	ENSMUST00000145386	retained_intron		8	1	36094861	3303
ENSMUSG00000050271	protein_coding	Prag1	ENSMUST00000150295	retained_intron		8	1	36094861	4600
ENSMUSG00000043943	protein_coding	Naalad2	ENSMUST00000001826	protein_coding		9	-1	18392123	2831
ENSMUSG00000026315	protein_coding	Serpinb8	ENSMUST00000000514	protein_coding	principal1	1	1	107590006	3001
ENSMUSG00000043943	protein_coding	Naalad2	ENSMUST00000168934	retained_intron		9	-1	18385922	455
ENSMUSG00000083659	processed_pseudogene	Gm11258	ENSMUST00000121086	processed_pseudogene		4	-1	74689324	1218
ENSMUSG00000049881	transcribed_processed_pseudogene	2810025M15Rik	ENSMUST00000061537	processed_transcript		1	1	157412352	1194
ENSMUSG00000101358	processed_pseudogene	Gm29661	ENSMUST00000186781	processed_pseudogene		Y	1	68170371	315
ENSMUSG00000057604	protein_coding	Lmcd1	ENSMUST00000032376	protein_coding	principal1	6	1	112273758	1730
ENSMUSG00000096188	protein_coding	Cmtm4	ENSMUST00000179802	protein_coding	principal1	8	-1	104395807	7734
ENSMUSG00000092466	unprocessed_pseudogene	Vmn1r-ps57	ENSMUST00000174879	unprocessed_pseudogene		7	-1	11965849	288
ENSMUSG00000043943	protein_coding	Naalad2	ENSMUST00000172116	protein_coding		9	-1	18402972	755
ENSMUSG00000049881	transcribed_processed_pseudogene	2810025M15Rik	ENSMUST00000187761	processed_transcript		1	1	157412640	539
ENSMUSG00000049881	transcribed_processed_pseudogene	2810025M15Rik	ENSMUST00000194868	TEC		1	1	157412978	294
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000224453	processed_transcript		14	1	30479535	960
ENSMUSG00000110486	sense_intronic	Gm45877	ENSMUST00000212110	sense_intronic		8	-1	104363668	564
ENSMUSG00000113319	unprocessed_pseudogene	Gm9628	ENSMUST00000222169	unprocessed_pseudogene		13	1	13113355	725
ENSMUSG00000044574	antisense	5031434C07Rik	ENSMUST00000188014	antisense		6	-1	112288836	3244
ENSMUSG00000044574	antisense	5031434C07Rik	ENSMUST00000053559	antisense		6	-1	112288837	2894
ENSMUSG00000049881	transcribed_processed_pseudogene	2810025M15Rik	ENSMUST00000189791	transcribed_processed_pseudogene		1	1	157419902	251
ENSMUSG00000110049	processed_pseudogene	Gm3836	ENSMUST00000211377	processed_pseudogene		7	1	11970947	1613
ENSMUSG00000104448	lincRNA	Gm37256	ENSMUST00000193034	lincRNA		3	1	75956101	566
ENSMUSG00000092208	unprocessed_pseudogene	Vmn1r-ps58	ENSMUST00000174460	unprocessed_pseudogene		7	-1	11977789	840
ENSMUSG00000102391	TEC	Gm37578	ENSMUST00000192256	TEC		1	-1	157355650	1177
ENSMUSG00000059772	protein_coding	Slx1b	ENSMUST00000144897	protein_coding	principal1	7	-1	126695784	3152
ENSMUSG00000001260	protein_coding	Gabrg1	ENSMUST00000031119	protein_coding	principal1	5	-1	70842617	4771
ENSMUSG00000043943	protein_coding	Naalad2	ENSMUST00000101453	protein_coding		9	-1	18402974	414
ENSMUSG00000034892	protein_coding	Rps29	ENSMUST00000037023	protein_coding	principal1	12	-1	69159186	390
ENSMUSG00000101816	unprocessed_pseudogene	Gm29659	ENSMUST00000187063	unprocessed_pseudogene		Y	1	68206802	696
ENSMUSG00000113675	processed_pseudogene	Gm18259	ENSMUST00000220991	processed_pseudogene		13	-1	13121263	2010
ENSMUSG00000036594	protein_coding	H2-Aa	ENSMUST00000040655	protein_coding	principal1	17	-1	34287823	1128
ENSMUSG00000113908	TEC	Gm10811	ENSMUST00000221985	TEC		13	-1	13171177	2448
ENSMUSG00000026315	protein_coding	Serpinb8	ENSMUST00000112706	protein_coding	principal1	1	1	107590006	4581
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000160383	nonsense_mediated_decay		5	1	29195993	1295
ENSMUSG00000043943	protein_coding	Naalad2	ENSMUST00000164081	protein_coding		9	-1	18402995	474
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202335	retained_intron		5	-1	134456277	3068
ENSMUSG00000034892	protein_coding	Rps29	ENSMUST00000094291	retained_intron		12	-1	69159054	461
ENSMUSG00000043943	protein_coding	Naalad2	ENSMUST00000172200	processed_transcript		9	-1	18402976	441
ENSMUSG00000001260	protein_coding	Gabrg1	ENSMUST00000199705	protein_coding		5	-1	70842204	3507
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000159272	protein_coding		5	1	29195995	374
ENSMUSG00000073842	protein_coding	Mup7	ENSMUST00000079697	protein_coding	principal2	4	-1	60070411	927
ENSMUSG00000059772	protein_coding	Slx1b	ENSMUST00000084586	retained_intron		7	-1	126695639	2062
ENSMUSG00000000263	protein_coding	Glra1	ENSMUST00000102716	protein_coding	principal3	11	-1	55608198	2390
ENSMUSG00000109860	unprocessed_pseudogene	Gm17737	ENSMUST00000210183	unprocessed_pseudogene		7	-1	11983912	1147
ENSMUSG00000106932	lincRNA	4930487D11Rik	ENSMUST00000201983	lincRNA		5	1	38344435	295
ENSMUSG00000073842	protein_coding	Mup7	ENSMUST00000125282	protein_coding		4	-1	60070411	624
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000201441	protein_coding		5	-1	134395796	786
ENSMUSG00000110184	processed_pseudogene	Gm45429	ENSMUST00000209527	processed_pseudogene		7	1	11991230	172
ENSMUSG00000026315	protein_coding	Serpinb8	ENSMUST00000151283	retained_intron		1	1	107590046	1191
ENSMUSG00000022769	protein_coding	Sdf2l1	ENSMUST00000023453	protein_coding	principal1	16	-1	17132383	1108
ENSMUSG00000036594	protein_coding	H2-Aa	ENSMUST00000174751	protein_coding		17	-1	34287791	826
ENSMUSG00000049573	protein_coding	Olfr780	ENSMUST00000215503	protein_coding	principal1	10	1	129318117	2910
ENSMUSG00000082533	processed_pseudogene	Gm11253	ENSMUST00000118486	processed_pseudogene		4	-1	75081700	201
ENSMUSG00000026315	protein_coding	Serpinb8	ENSMUST00000123086	protein_coding		1	1	107605880	373
ENSMUSG00000092398	unprocessed_pseudogene	Vmn1r-ps59	ENSMUST00000172698	unprocessed_pseudogene		7	1	11994883	199
ENSMUSG00000059772	protein_coding	Slx1b	ENSMUST00000142337	nonsense_mediated_decay		7	-1	126695724	1390
ENSMUSG00000001260	protein_coding	Gabrg1	ENSMUST00000197068	retained_intron		5	-1	70842314	1926
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000200798	nonsense_mediated_decay		5	-1	134395796	857
ENSMUSG00000084311	processed_pseudogene	Gm11257	ENSMUST00000121313	processed_pseudogene		4	1	75128712	315
ENSMUSG00000056509	protein_coding	Gm9999	ENSMUST00000070660	protein_coding	principal5	7	1	46983580	486
ENSMUSG00000001260	protein_coding	Gabrg1	ENSMUST00000200126	retained_intron		5	-1	70842314	2743
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000140025	retained_intron		7	1	141338956	3341
ENSMUSG00000059772	protein_coding	Slx1b	ENSMUST00000155012	retained_intron		7	-1	126695745	1567
ENSMUSG00000116694	processed_pseudogene	Gm6440	ENSMUST00000231970	processed_pseudogene		16	1	17137328	354
ENSMUSG00000073842	protein_coding	Mup7	ENSMUST00000166098	protein_coding	alternative2	4	-1	60070475	1033
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000200817	retained_intron		5	-1	134384502	802
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000210251	processed_transcript		7	1	141338980	1042
ENSMUSG00000061273	protein_coding	Mmgt1	ENSMUST00000059899	protein_coding	principal1	X	-1	56598069	4234
ENSMUSG00000036594	protein_coding	H2-Aa	ENSMUST00000173944	retained_intron		17	-1	34287823	3223
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000201526	nonsense_mediated_decay		5	-1	134395796	604
ENSMUSG00000049573	protein_coding	Olfr780	ENSMUST00000063168	protein_coding	principal1	10	1	129321569	1025
ENSMUSG00000000263	protein_coding	Glra1	ENSMUST00000075603	protein_coding	alternative1	11	-1	55607821	2037
ENSMUSG00000047721	protein_coding	Bola2	ENSMUST00000144571	retained_intron		7	1	126695401	1013
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000145108	processed_transcript		7	1	141338987	770
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000201447	protein_coding		5	-1	134395796	579
ENSMUSG00000107984	processed_pseudogene	Gm5306	ENSMUST00000203325	processed_pseudogene		6	1	53777384	757
ENSMUSG00000056509	protein_coding	Gm9999	ENSMUST00000188312	protein_coding	principal5	7	1	46983661	404
ENSMUSG00000109704	lincRNA	Gm38414	ENSMUST00000209819	lincRNA		8	1	36156010	1488
ENSMUSG00000083363	processed_pseudogene	Gm12237	ENSMUST00000120158	processed_pseudogene		11	1	55554940	470
ENSMUSG00000026213	protein_coding	Stk11ip	ENSMUST00000027414	protein_coding	principal1	1	1	75521529	4458
ENSMUSG00000112340	TEC	Gm47016	ENSMUST00000220278	TEC		10	-1	49663273	1627
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202334	retained_intron		5	-1	134395700	741
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000136736	retained_intron		7	1	141339004	648
ENSMUSG00000109704	lincRNA	Gm38414	ENSMUST00000211253	lincRNA		8	1	36159479	1405
ENSMUSG00000092072	processed_pseudogene	Gm4540	ENSMUST00000170669	processed_pseudogene		3	1	106034664	429
ENSMUSG00000056509	protein_coding	Gm9999	ENSMUST00000185832	protein_coding	alternative2	7	1	46986820	335
ENSMUSG00000112295	TEC	Gm47017	ENSMUST00000219875	TEC		10	-1	49192365	3372
ENSMUSG00000086460	antisense	Gm12236	ENSMUST00000152968	antisense		11	1	55514846	250
ENSMUSG00000036594	protein_coding	H2-Aa	ENSMUST00000165139	processed_transcript		17	-1	34287777	664
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000143633	protein_coding		7	1	141339006	371
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202202	retained_intron		5	-1	134402188	810
ENSMUSG00000112103	sense_intronic	Gm47018	ENSMUST00000217904	sense_intronic		10	-1	49237861	947
ENSMUSG00000081067	processed_pseudogene	Gm12912	ENSMUST00000121596	processed_pseudogene		4	1	75147609	1381
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000146042	retained_intron		7	1	141342656	707
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000201704	protein_coding		5	-1	134415256	751
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000035844	protein_coding	principal1	7	1	44467980	930
ENSMUSG00000111935	TEC	Gm47023	ENSMUST00000218320	TEC		10	-1	49484479	2480
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000127501	retained_intron		7	1	141357996	583
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202414	retained_intron		5	-1	134456679	2506
ENSMUSG00000112142	TEC	Gm47022	ENSMUST00000219161	TEC		10	-1	49702834	2472
ENSMUSG00000110321	lincRNA	Gm39164	ENSMUST00000210407	lincRNA		8	-1	36176016	182
ENSMUSG00000108255	lincRNA	Gm16499	ENSMUST00000204633	lincRNA		6	1	53819974	2177
ENSMUSG00000026213	protein_coding	Stk11ip	ENSMUST00000113553	protein_coding	principal1	1	1	75521552	4153
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000136240	processed_transcript		7	1	141358205	620
ENSMUSG00000108255	lincRNA	Gm16499	ENSMUST00000104970	lincRNA		6	1	53819975	66
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000202763	processed_transcript		5	-1	134456674	608
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000206210	retained_intron		7	1	44468006	1557
ENSMUSG00000110321	lincRNA	Gm39164	ENSMUST00000211519	lincRNA		8	-1	36176047	236
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000133669	retained_intron		7	1	141360246	528
ENSMUSG00000096016	protein_coding	Gm20937	ENSMUST00000189084	protein_coding	alternative2	Y	-1	68294888	811
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000210158	retained_intron		7	1	141360755	1652
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000201647	protein_coding		5	-1	134455951	361
ENSMUSG00000025133	protein_coding	Ints4	ENSMUST00000026126	protein_coding	principal1	7	1	97480956	3240
ENSMUSG00000025504	protein_coding	Eps8l2	ENSMUST00000155729	processed_transcript		7	1	141361537	902
ENSMUSG00000108211	TEC	Gm44130	ENSMUST00000205157	TEC		6	-1	71435107	3004
ENSMUSG00000110116	lincRNA	4933430A20Rik	ENSMUST00000210943	lincRNA		8	1	36176141	1558
ENSMUSG00000096016	protein_coding	Gm20937	ENSMUST00000189422	protein_coding	principal5	Y	-1	68294898	923
ENSMUSG00000110176	lincRNA	Gm35520	ENSMUST00000209235	lincRNA		8	1	36188372	784
ENSMUSG00000096016	protein_coding	Gm20937	ENSMUST00000180329	protein_coding	alternative2	Y	-1	68293479	567
ENSMUSG00000111698	processed_pseudogene	Gm47105	ENSMUST00000215676	processed_pseudogene		9	-1	13727442	356
ENSMUSG00000027908	protein_coding	Tchhl1	ENSMUST00000029516	protein_coding	principal1	3	1	93468754	2066
ENSMUSG00000109752	processed_pseudogene	Gm18597	ENSMUST00000209519	processed_pseudogene		7	-1	11996756	694
ENSMUSG00000108175	antisense	Gm16499	ENSMUST00000204648	antisense		6	1	53818743	2065
ENSMUSG00000047721	protein_coding	Bola2	ENSMUST00000130498	protein_coding	principal1	7	1	126695436	1266
ENSMUSG00000110292	processed_pseudogene	Gm17850	ENSMUST00000210023	processed_pseudogene		7	-1	11999663	1154
ENSMUSG00000023079	protein_coding	Gtf2ird1	ENSMUST00000167084	protein_coding		5	-1	134456716	3283
ENSMUSG00000092318	unprocessed_pseudogene	Vmn1r-ps60	ENSMUST00000173467	unprocessed_pseudogene		7	1	12005066	852
ENSMUSG00000043496	protein_coding	Tril	ENSMUST00000127748	protein_coding	principal1	6	-1	53820830	5363
ENSMUSG00000047721	protein_coding	Bola2	ENSMUST00000052145	processed_transcript		7	1	126695966	333
ENSMUSG00000047721	protein_coding	Bola2	ENSMUST00000106369	protein_coding		7	1	126695973	642
ENSMUSG00000023809	protein_coding	Rps6ka2	ENSMUST00000024575	protein_coding	principal1	17	1	7170115	5406
ENSMUSG00000101861	lincRNA	Gm29450	ENSMUST00000189657	lincRNA		Y	-1	68357085	1497
ENSMUSG00000047721	protein_coding	Bola2	ENSMUST00000206275	retained_intron		7	1	126696003	3796
ENSMUSG00000025133	protein_coding	Ints4	ENSMUST00000206644	retained_intron		7	1	97481003	2179
ENSMUSG00000101861	lincRNA	Gm29450	ENSMUST00000191152	lincRNA		Y	-1	68356633	437
ENSMUSG00000025133	protein_coding	Ints4	ENSMUST00000205481	retained_intron		7	1	97481013	885
ENSMUSG00000023809	protein_coding	Rps6ka2	ENSMUST00000232617	processed_transcript		17	1	7170127	3280
ENSMUSG00000109758	unprocessed_pseudogene	Gm18854	ENSMUST00000211196	unprocessed_pseudogene		7	1	12025451	329
ENSMUSG00000023809	protein_coding	Rps6ka2	ENSMUST00000232527	protein_coding		17	1	7227916	924
ENSMUSG00000028398	protein_coding	Dmac1	ENSMUST00000030103	protein_coding	principal1	4	-1	75278305	741
ENSMUSG00000082922	transcribed_unprocessed_pseudogene	Gm6939	ENSMUST00000122029	transcribed_unprocessed_pseudogene		7	-1	126690034	864
ENSMUSG00000025133	protein_coding	Ints4	ENSMUST00000205876	nonsense_mediated_decay		7	1	97501779	585
ENSMUSG00000101598	lincRNA	Gm29449	ENSMUST00000187820	lincRNA		Y	1	68388969	2168
ENSMUSG00000023809	protein_coding	Rps6ka2	ENSMUST00000232136	processed_transcript		17	1	7255861	538
ENSMUSG00000025133	protein_coding	Ints4	ENSMUST00000205387	retained_intron		7	1	97530154	600
ENSMUSG00000095864	protein_coding	Vmn1r77	ENSMUST00000228213	protein_coding	alternative2	7	1	12036752	8094
ENSMUSG00000020712	protein_coding	Tcam1	ENSMUST00000142472	nonsense_mediated_decay		11	1	106276672	3059
ENSMUSG00000025133	protein_coding	Ints4	ENSMUST00000205706	retained_intron		7	1	97535078	579
ENSMUSG00000095864	protein_coding	Vmn1r77	ENSMUST00000226525	protein_coding	alternative2	7	1	12036752	8252
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000001247	protein_coding	principal1	5	1	29195997	1600
ENSMUSG00000023809	protein_coding	Rps6ka2	ENSMUST00000231530	processed_transcript		17	1	7260636	1650
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000126971	retained_intron		7	1	4119530	2513
ENSMUSG00000025133	protein_coding	Ints4	ENSMUST00000206843	retained_intron		7	1	97535310	3095
ENSMUSG00000095864	protein_coding	Vmn1r77	ENSMUST00000227320	protein_coding	principal2	7	1	12036752	8308
ENSMUSG00000070366	protein_coding	Plpp4	ENSMUST00000094018	protein_coding	principal1	7	1	129257031	1256
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000161398	protein_coding		5	1	29196003	626
ENSMUSG00000040648	protein_coding	Ppip5k2	ENSMUST00000042509	protein_coding		1	-1	97770411	5882
ENSMUSG00000095864	protein_coding	Vmn1r77	ENSMUST00000164446	protein_coding	principal2	7	1	12041299	921
ENSMUSG00000066807	processed_pseudogene	Gm10179	ENSMUST00000086233	processed_pseudogene		7	-1	12086612	688
ENSMUSG00000070366	protein_coding	Plpp4	ENSMUST00000206551	retained_intron		7	1	129257038	596
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000160246	protein_coding	principal1	5	1	29196006	1565
ENSMUSG00000092535	unprocessed_pseudogene	Vmn1r-ps61	ENSMUST00000173771	unprocessed_pseudogene		7	1	12091277	822
ENSMUSG00000070366	protein_coding	Plpp4	ENSMUST00000206918	processed_transcript		7	1	129257047	271
ENSMUSG00000034883	protein_coding	Lrr1	ENSMUST00000110621	protein_coding	principal1	12	1	69168814	1500
ENSMUSG00000020712	protein_coding	Tcam1	ENSMUST00000044462	protein_coding	principal1	11	1	106276748	3511
ENSMUSG00000015854	protein_coding	Cd5l	ENSMUST00000015998	protein_coding	principal1	3	1	87357881	2036
ENSMUSG00000095583	IG_V_gene	Ighv14-2	ENSMUST00000103467	IG_V_gene	principal1	12	-1	113994898	351
ENSMUSG00000107040	antisense	Gm43791	ENSMUST00000202914	antisense		5	-1	35033445	468
ENSMUSG00000034883	protein_coding	Lrr1	ENSMUST00000222520	protein_coding		12	1	69168821	767
ENSMUSG00000070366	protein_coding	Plpp4	ENSMUST00000205630	nonsense_mediated_decay		7	1	129257049	1098
ENSMUSG00000040648	protein_coding	Ppip5k2	ENSMUST00000112845	protein_coding	principal5	1	-1	97770411	6239
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225196	nonsense_mediated_decay		14	1	30479612	3194
ENSMUSG00000100216	unprocessed_pseudogene	Gm21867	ENSMUST00000189917	unprocessed_pseudogene		Y	1	68398364	696
ENSMUSG00000070366	protein_coding	Plpp4	ENSMUST00000205896	protein_coding		7	1	129257055	714
ENSMUSG00000040648	protein_coding	Ppip5k2	ENSMUST00000191556	protein_coding		1	-1	97716546	561
ENSMUSG00000034883	protein_coding	Lrr1	ENSMUST00000222382	processed_transcript		12	1	69168842	377
ENSMUSG00000026213	protein_coding	Stk11ip	ENSMUST00000140963	retained_intron		1	1	75521791	4095
ENSMUSG00000086161	lincRNA	Gm15389	ENSMUST00000153774	lincRNA		1	1	107687008	666
ENSMUSG00000040648	protein_coding	Ppip5k2	ENSMUST00000189992	retained_intron		1	-1	97721307	2523
ENSMUSG00000109686	unprocessed_pseudogene	Gm45562	ENSMUST00000210015	unprocessed_pseudogene		7	-1	12105427	1537
ENSMUSG00000097979	transcribed_processed_pseudogene	Gm4691	ENSMUST00000182339	transcribed_processed_pseudogene		6	-1	128203233	1000
ENSMUSG00000095138	protein_coding	Olfr781	ENSMUST00000204108	protein_coding	principal1	10	1	129328854	1304
ENSMUSG00000040648	protein_coding	Ppip5k2	ENSMUST00000152788	retained_intron		1	-1	97746136	3844
ENSMUSG00000026213	protein_coding	Stk11ip	ENSMUST00000129652	retained_intron		1	1	75521811	706
ENSMUSG00000095138	protein_coding	Olfr781	ENSMUST00000075613	protein_coding	principal1	10	1	129332883	936
ENSMUSG00000097979	transcribed_processed_pseudogene	Gm4691	ENSMUST00000182989	processed_transcript		6	-1	128203276	885
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000022535	protein_coding	principal1	14	1	30479612	5576
ENSMUSG00000083224	processed_pseudogene	Gm11255	ENSMUST00000120448	processed_pseudogene		4	1	75324501	1180
ENSMUSG00000099641	unprocessed_pseudogene	Gm29448	ENSMUST00000186675	unprocessed_pseudogene		Y	1	68435293	615
ENSMUSG00000040648	protein_coding	Ppip5k2	ENSMUST00000171129	protein_coding	alternative1	1	-1	97761538	3425
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000160887	retained_intron		5	1	29196058	1738
ENSMUSG00000026213	protein_coding	Stk11ip	ENSMUST00000129794	retained_intron		1	1	75528305	513
ENSMUSG00000026213	protein_coding	Stk11ip	ENSMUST00000156838	retained_intron		1	1	75528640	2968
ENSMUSG00000103271	IG_V_pseudogene	Ighv4-2	ENSMUST00000192975	IG_V_pseudogene		12	-1	114013606	362
ENSMUSG00000084026	processed_pseudogene	Gm11259	ENSMUST00000120554	processed_pseudogene		4	1	75380760	715
ENSMUSG00000100271	unprocessed_pseudogene	Gm21127	ENSMUST00000186909	unprocessed_pseudogene		Y	1	68464868	693
ENSMUSG00000095075	protein_coding	Olfr782	ENSMUST00000213970	protein_coding	principal1	10	1	129348850	1944
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000160051	processed_transcript		5	1	29196084	403
ENSMUSG00000026213	protein_coding	Stk11ip	ENSMUST00000154303	retained_intron		1	1	75529674	590
ENSMUSG00000095075	protein_coding	Olfr782	ENSMUST00000077024	protein_coding	principal1	10	1	129350565	945
ENSMUSG00000033909	protein_coding	Usp36	ENSMUST00000106296	protein_coding	principal1	11	-1	118290231	5655
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000198669	protein_coding		5	1	29196587	355
ENSMUSG00000026213	protein_coding	Stk11ip	ENSMUST00000146575	retained_intron		1	1	75532531	559
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225518	retained_intron		14	1	30479635	2044
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000162975	protein_coding		5	1	29198671	837
ENSMUSG00000026213	protein_coding	Stk11ip	ENSMUST00000150560	processed_transcript		1	1	75533038	430
ENSMUSG00000027762	protein_coding	Sucnr1	ENSMUST00000029326	protein_coding	principal1	3	1	60081869	1571
ENSMUSG00000107790	unprocessed_pseudogene	Olfr783-ps1	ENSMUST00000205105	unprocessed_pseudogene		10	1	129376961	441
ENSMUSG00000025228	protein_coding	Actr1a	ENSMUST00000040270	protein_coding	principal1	19	-1	46395747	2757
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000163050	retained_intron		5	1	29223786	4672
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000231036	nonsense_mediated_decay		16	-1	4947737	1289
ENSMUSG00000022768	protein_coding	Ccdc116	ENSMUST00000232540	protein_coding	alternative2	16	-1	17144439	2359
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000223658	protein_coding		14	1	30479677	1257
ENSMUSG00000029130	protein_coding	Rnf32	ENSMUST00000168460	protein_coding	principal1	5	1	29198006	1107
ENSMUSG00000033909	protein_coding	Usp36	ENSMUST00000141647	retained_intron		11	-1	118266048	3815
ENSMUSG00000027762	protein_coding	Sucnr1	ENSMUST00000195544	processed_transcript		3	1	60081902	366
ENSMUSG00000025228	protein_coding	Actr1a	ENSMUST00000237742	protein_coding		19	-1	46395738	2683
ENSMUSG00000022768	protein_coding	Ccdc116	ENSMUST00000023452	protein_coding	principal2	16	-1	17147229	4210
ENSMUSG00000025228	protein_coding	Actr1a	ENSMUST00000236814	processed_transcript		19	-1	46379500	1458
ENSMUSG00000033909	protein_coding	Usp36	ENSMUST00000148998	retained_intron		11	-1	118263284	1212
ENSMUSG00000108713	lincRNA	Gm33027	ENSMUST00000206093	lincRNA		7	-1	129403090	4664
ENSMUSG00000109124	lincRNA	Gm44516	ENSMUST00000208794	lincRNA		8	-1	9157221	833
ENSMUSG00000025228	protein_coding	Actr1a	ENSMUST00000237477	nonsense_mediated_decay		19	-1	46395698	429
ENSMUSG00000109064	lincRNA	Gm39128	ENSMUST00000208237	lincRNA		8	1	9167517	1094
ENSMUSG00000002222	protein_coding	Rmnd5a	ENSMUST00000002292	protein_coding	principal1	6	-1	71440637	6165
ENSMUSG00000033909	protein_coding	Usp36	ENSMUST00000144153	protein_coding		11	-1	118290180	3391
ENSMUSG00000024128	protein_coding	Sbp	ENSMUST00000181985	protein_coding	principal1	17	1	23941672	920
ENSMUSG00000025228	protein_coding	Actr1a	ENSMUST00000236117	processed_transcript		19	-1	46395748	1076
ENSMUSG00000038506	protein_coding	Dcun1d2	ENSMUST00000110840	protein_coding		8	-1	13288125	2853
ENSMUSG00000101477	processed_pseudogene	Gm18448	ENSMUST00000186286	processed_pseudogene		1	1	107952837	599
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225286	nonsense_mediated_decay		14	1	30479679	1317
ENSMUSG00000022768	protein_coding	Ccdc116	ENSMUST00000115711	protein_coding	principal2	16	-1	17144397	2103
ENSMUSG00000099484	processed_pseudogene	Gm28282	ENSMUST00000186072	processed_pseudogene		1	-1	107963307	186
ENSMUSG00000002222	protein_coding	Rmnd5a	ENSMUST00000149415	protein_coding		6	-1	71399293	3768
ENSMUSG00000033909	protein_coding	Usp36	ENSMUST00000151433	retained_intron		11	-1	118290072	1821
ENSMUSG00000025228	protein_coding	Actr1a	ENSMUST00000235752	nonsense_mediated_decay		19	-1	46395729	533
ENSMUSG00000025228	protein_coding	Actr1a	ENSMUST00000237952	processed_transcript		19	-1	46395725	964
ENSMUSG00000117936	transcribed_processed_pseudogene	Gm18978	ENSMUST00000236221	transcribed_processed_pseudogene		18	1	79196835	872
ENSMUSG00000085024	lincRNA	C230035I16Rik	ENSMUST00000141543	lincRNA		13	-1	23431022	623
ENSMUSG00000117936	transcribed_processed_pseudogene	Gm18978	ENSMUST00000236903	processed_transcript		18	1	79197633	1623
ENSMUSG00000033909	protein_coding	Usp36	ENSMUST00000092382	protein_coding	principal1	11	-1	118290244	5609
ENSMUSG00000002222	protein_coding	Rmnd5a	ENSMUST00000144081	processed_transcript		6	-1	71396282	3086
ENSMUSG00000024128	protein_coding	Sbp	ENSMUST00000183252	protein_coding	principal1	17	1	23941833	1002
ENSMUSG00000022768	protein_coding	Ccdc116	ENSMUST00000232033	protein_coding	principal2	16	-1	17144423	1900
ENSMUSG00000117828	processed_pseudogene	Gm2116	ENSMUST00000236697	processed_pseudogene		18	-1	79305162	1606
ENSMUSG00000100457	lincRNA	D830032E09Rik	ENSMUST00000189845	lincRNA		1	1	107917259	2092
ENSMUSG00000118301	processed_pseudogene	Gm20593	ENSMUST00000235488	processed_pseudogene		18	1	79348434	266
ENSMUSG00000002222	protein_coding	Rmnd5a	ENSMUST00000140696	processed_transcript		6	-1	71396187	999
ENSMUSG00000085024	lincRNA	C230035I16Rik	ENSMUST00000153753	lincRNA		13	-1	23430826	643
ENSMUSG00000024128	protein_coding	Sbp	ENSMUST00000183017	protein_coding		17	1	23941913	700
ENSMUSG00000118130	processed_pseudogene	Gm50176	ENSMUST00000237642	processed_pseudogene		18	-1	79575360	847
ENSMUSG00000022768	protein_coding	Ccdc116	ENSMUST00000231597	protein_coding		16	-1	17144438	367
ENSMUSG00000002222	protein_coding	Rmnd5a	ENSMUST00000123947	retained_intron		6	-1	71397198	667
ENSMUSG00000100457	lincRNA	D830032E09Rik	ENSMUST00000186875	lincRNA		1	1	107917285	2193
ENSMUSG00000038506	protein_coding	Dcun1d2	ENSMUST00000203467	nonsense_mediated_decay		8	-1	13287830	2729
ENSMUSG00000039633	protein_coding	Lonrf1	ENSMUST00000239119	protein_coding	alternative2	8	-1	36249516	3930
ENSMUSG00000100457	lincRNA	D830032E09Rik	ENSMUST00000189497	lincRNA		1	1	107936709	1632
ENSMUSG00000039633	protein_coding	Lonrf1	ENSMUST00000065297	protein_coding	principal2	8	-1	36249516	3930
ENSMUSG00000089842	antisense	Pitpnm2os2	ENSMUST00000159053	antisense		5	1	124194907	828
ENSMUSG00000089842	antisense	Pitpnm2os2	ENSMUST00000162577	antisense		5	1	124194960	744
ENSMUSG00000024128	protein_coding	Sbp	ENSMUST00000182868	protein_coding		17	1	23941985	964
ENSMUSG00000084253	processed_pseudogene	Gm11256	ENSMUST00000118109	processed_pseudogene		4	1	75854518	829
ENSMUSG00000081844	processed_pseudogene	Gm11241	ENSMUST00000117371	processed_pseudogene		4	-1	75903155	896
ENSMUSG00000098154	processed_pseudogene	Gm5787	ENSMUST00000183049	processed_pseudogene		8	-1	36373633	1038
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000224810	processed_transcript		14	1	30485068	1884
ENSMUSG00000089842	antisense	Pitpnm2os2	ENSMUST00000198466	antisense		5	1	124195642	2467
ENSMUSG00000024128	protein_coding	Sbp	ENSMUST00000183155	protein_coding	principal1	17	1	23942077	882
ENSMUSG00000109977	processed_pseudogene	Gm19140	ENSMUST00000209790	processed_pseudogene		8	1	36450380	421
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225521	processed_transcript		14	1	30485082	1759
ENSMUSG00000110863	bidirectional_promoter_lncRNA	Gm34655	ENSMUST00000213695	bidirectional_promoter_lncRNA		9	1	121277775	719
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225923	processed_transcript		14	1	30485082	1965
ENSMUSG00000034109	protein_coding	Golim4	ENSMUST00000038563	protein_coding	principal3	3	-1	75956929	5546
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225243	processed_transcript		14	1	30485082	1980
ENSMUSG00000024128	protein_coding	Sbp	ENSMUST00000182519	protein_coding		17	1	23942383	368
ENSMUSG00000034105	protein_coding	Meak7	ENSMUST00000049156	protein_coding	principal1	8	-1	119778416	3085
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000224692	processed_transcript		14	1	30485082	2117
ENSMUSG00000055360	protein_coding	Prl2c5	ENSMUST00000021778	protein_coding	principal3	13	1	13182715	844
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225124	processed_transcript		14	1	30485098	1985
ENSMUSG00000110863	bidirectional_promoter_lncRNA	Gm34655	ENSMUST00000215259	bidirectional_promoter_lncRNA		9	1	121277776	877
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225806	processed_transcript		14	1	30485103	1836
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000223754	processed_transcript		14	1	30513265	1841
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225655	processed_transcript		14	1	30513272	1481
ENSMUSG00000034105	protein_coding	Meak7	ENSMUST00000212501	retained_intron		8	-1	119778396	1270
ENSMUSG00000038506	protein_coding	Dcun1d2	ENSMUST00000045366	protein_coding	principal1	8	-1	13287841	2748
ENSMUSG00000000632	protein_coding	Sez6	ENSMUST00000093995	protein_coding	principal3	11	1	77930800	4239
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000223568	processed_transcript		14	1	30513287	1396
ENSMUSG00000055360	protein_coding	Prl2c5	ENSMUST00000126540	protein_coding	alternative2	13	1	13182716	971
ENSMUSG00000034105	protein_coding	Meak7	ENSMUST00000212534	protein_coding		8	-1	119778394	555
ENSMUSG00000034109	protein_coding	Golim4	ENSMUST00000117242	protein_coding	alternative2	3	-1	75956949	4551
ENSMUSG00000024128	protein_coding	Sbp	ENSMUST00000024940	protein_coding	principal1	17	1	23942375	833
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225407	processed_transcript		14	1	30523474	651
ENSMUSG00000056014	protein_coding	A430033K04Rik	ENSMUST00000200521	protein_coding		5	1	138622859	1110
ENSMUSG00000055360	protein_coding	Prl2c5	ENSMUST00000143335	retained_intron		13	1	13182735	485
ENSMUSG00000020713	protein_coding	Gh	ENSMUST00000103071	protein_coding	principal1	11	-1	106301865	862
ENSMUSG00000034109	protein_coding	Golim4	ENSMUST00000134219	retained_intron		3	-1	75879008	2062
ENSMUSG00000103297	IG_V_pseudogene	Ighv3-2	ENSMUST00000191842	IG_V_pseudogene		12	-1	114034233	349
ENSMUSG00000056014	protein_coding	A430033K04Rik	ENSMUST00000198958	protein_coding		5	1	138622876	2264
ENSMUSG00000055360	protein_coding	Prl2c5	ENSMUST00000151144	protein_coding		13	1	13182739	623
ENSMUSG00000021962	protein_coding	Dcp1a	ENSMUST00000225934	processed_transcript		14	1	30523707	755
ENSMUSG00000107873	transcribed_processed_pseudogene	Gm19065	ENSMUST00000203910	transcribed_processed_pseudogene		6	1	128208119	1165
ENSMUSG00000034109	protein_coding	Golim4	ENSMUST00000134444	retained_intron		3	-1	75893082	563
ENSMUSG00000114650	processed_pseudogene	Gm47570	ENSMUST00000224405	processed_pseudogene		14	1	30207738	482
ENSMUSG00000092350	unprocessed_pseudogene	Vmn1r-ps62	ENSMUST00000173275	unprocessed_pseudogene		7	1	12113265	910
ENSMUSG00000024987	protein_coding	Cyp26a1	ENSMUST00000025946	protein_coding	principal1	19	1	37697798	1791
ENSMUSG00000109914	processed_pseudogene	Gm45498	ENSMUST00000210346	processed_pseudogene		7	1	12123641	283
ENSMUSG00000034109	protein_coding	Golim4	ENSMUST00000150904	protein_coding	alternative2	3	-1	75902446	430
ENSMUSG00000038506	protein_coding	Dcun1d2	ENSMUST00000110838	protein_coding		8	-1	13288131	2955
ENSMUSG00000107873	transcribed_processed_pseudogene	Gm19065	ENSMUST00000203269	processed_transcript		6	1	128209044	788
ENSMUSG00000056014	protein_coding	A430033K04Rik	ENSMUST00000069862	protein_coding	principal1	5	1	138622894	3038
ENSMUSG00000118437	antisense	Gm50467	ENSMUST00000238444	antisense		14	1	30094762	700
ENSMUSG00000024987	protein_coding	Cyp26a1	ENSMUST00000236500	retained_intron		19	1	37698085	659
ENSMUSG00000092248	unprocessed_pseudogene	Vmn1r-ps63	ENSMUST00000174565	unprocessed_pseudogene		7	1	12138321	989
ENSMUSG00000056014	protein_coding	A430033K04Rik	ENSMUST00000032590	protein_coding		5	1	138622859	1109
ENSMUSG00000038506	protein_coding	Dcun1d2	ENSMUST00000204673	processed_transcript		8	-1	13288124	2464
ENSMUSG00000107270	processed_pseudogene	Tgif1-ps	ENSMUST00000201864	processed_pseudogene		3	-1	60343093	736
ENSMUSG00000034109	protein_coding	Golim4	ENSMUST00000131987	retained_intron		3	-1	75956908	5230
ENSMUSG00000038506	protein_coding	Dcun1d2	ENSMUST00000203604	protein_coding		8	-1	13287833	2112
ENSMUSG00000103298	TEC	Gm38232	ENSMUST00000193602	TEC		5	1	138725395	411
ENSMUSG00000030410	protein_coding	Dmwd	ENSMUST00000032570	protein_coding	principal2	7	1	19076227	2494
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000206887	protein_coding		7	1	44468022	693
ENSMUSG00000034109	protein_coding	Golim4	ENSMUST00000125405	retained_intron		3	-1	75956650	817
ENSMUSG00000038506	protein_coding	Dcun1d2	ENSMUST00000204840	retained_intron		8	-1	13281592	841
ENSMUSG00000034109	protein_coding	Golim4	ENSMUST00000192433	retained_intron		3	-1	75956931	1816
ENSMUSG00000116675	processed_pseudogene	Gm49581	ENSMUST00000231600	processed_pseudogene		16	-1	57265805	444
ENSMUSG00000095634	protein_coding	Gm20816	ENSMUST00000187846	protein_coding	principal1	Y	1	68537955	1225
ENSMUSG00000030410	protein_coding	Dmwd	ENSMUST00000108479	protein_coding	alternative2	7	1	19076258	2388
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000117324	protein_coding	principal1	7	1	44468023	858
ENSMUSG00000095634	protein_coding	Gm20816	ENSMUST00000177765	protein_coding	principal1	Y	1	68539472	684
ENSMUSG00000034109	protein_coding	Golim4	ENSMUST00000167078	protein_coding	principal3	3	-1	75956937	2902
ENSMUSG00000027261	protein_coding	Hao1	ENSMUST00000028704	protein_coding	principal1	2	-1	134554368	2045
ENSMUSG00000024292	protein_coding	Cyp4f14	ENSMUST00000054174	protein_coding	principal1	17	-1	32917100	2221
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000120852	protein_coding	principal1	7	1	44468036	727
ENSMUSG00000030410	protein_coding	Dmwd	ENSMUST00000146429	processed_transcript		7	1	19077993	2080
ENSMUSG00000103024	TEC	Gm37685	ENSMUST00000193507	TEC		3	1	75952124	2177
ENSMUSG00000038506	protein_coding	Dcun1d2	ENSMUST00000110839	protein_coding		8	-1	13288126	2937
ENSMUSG00000020974	protein_coding	Pole2	ENSMUST00000221986	retained_intron		12	-1	69204457	545
ENSMUSG00000030410	protein_coding	Dmwd	ENSMUST00000138997	processed_transcript		7	1	19078026	439
ENSMUSG00000113221	processed_pseudogene	Gm18880	ENSMUST00000223333	processed_pseudogene		13	1	13197379	1541
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000134398	protein_coding		7	1	44468039	563
ENSMUSG00000063821	protein_coding	Dupd1	ENSMUST00000073870	protein_coding	principal1	14	-1	21714576	1138
ENSMUSG00000024292	protein_coding	Cyp4f14	ENSMUST00000235058	protein_coding	principal1	17	-1	32917328	2033
ENSMUSG00000107531	TEC	E330037G11Rik	ENSMUST00000204295	TEC		8	-1	13265187	1086
ENSMUSG00000113371	unprocessed_pseudogene	Gm48588	ENSMUST00000220605	unprocessed_pseudogene		13	1	13204876	252
ENSMUSG00000110037	lincRNA	4930543N07Rik	ENSMUST00000209357	lincRNA		7	1	138554230	1364
ENSMUSG00000027261	protein_coding	Hao1	ENSMUST00000140794	processed_transcript		2	-1	134554307	541
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000132952	retained_intron		7	1	44468043	623
ENSMUSG00000063821	protein_coding	Dupd1	ENSMUST00000224735	protein_coding		14	-1	21703102	548
ENSMUSG00000047507	protein_coding	Baiap3	ENSMUST00000182056	protein_coding	principal2	17	-1	25256364	4645
ENSMUSG00000101393	processed_transcript	Gm29447	ENSMUST00000186407	processed_transcript		Y	-1	68670844	1500
ENSMUSG00000110037	lincRNA	4930543N07Rik	ENSMUST00000209503	lincRNA		7	1	138554242	1117
ENSMUSG00000029452	protein_coding	Tmem116	ENSMUST00000111795	protein_coding	alternative2	5	1	121451893	2221
ENSMUSG00000105101	TEC	Gm43206	ENSMUST00000197990	TEC		3	1	34682633	114
ENSMUSG00000109802	lincRNA	Gm30808	ENSMUST00000211166	lincRNA		7	1	138700903	845
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000218823	protein_coding	principal1	10	-1	49788766	9427
ENSMUSG00000047507	protein_coding	Baiap3	ENSMUST00000182825	protein_coding		17	-1	25253947	3862
ENSMUSG00000101393	processed_transcript	Gm29447	ENSMUST00000186590	processed_transcript		Y	-1	68670391	438
ENSMUSG00000110241	processed_pseudogene	Gm45506	ENSMUST00000211620	processed_pseudogene		7	1	138820745	280
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000118628	protein_coding	principal1	7	1	44468045	864
ENSMUSG00000113729	processed_pseudogene	Gm48589	ENSMUST00000223064	processed_pseudogene		13	-1	13224925	263
ENSMUSG00000035759	protein_coding	Bbs10	ENSMUST00000219990	retained_intron		10	1	111298679	3047
ENSMUSG00000047507	protein_coding	Baiap3	ENSMUST00000182696	protein_coding		17	-1	25244311	499
ENSMUSG00000041774	protein_coding	Ydjc	ENSMUST00000231726	protein_coding		16	1	17144621	1713
ENSMUSG00000047507	protein_coding	Baiap3	ENSMUST00000182435	protein_coding	alternative2	17	-1	25256281	3758
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000217673	retained_intron		10	-1	49243036	4365
ENSMUSG00000100885	lincRNA	Gm29446	ENSMUST00000190887	lincRNA		Y	1	68702856	2166
ENSMUSG00000036062	protein_coding	Phf24	ENSMUST00000151824	processed_transcript		4	1	42916660	230
ENSMUSG00000047507	protein_coding	Baiap3	ENSMUST00000169109	protein_coding	alternative2	17	-1	25256281	3630
ENSMUSG00000024292	protein_coding	Cyp4f14	ENSMUST00000234759	protein_coding	principal1	17	-1	32917329	2034
ENSMUSG00000026926	protein_coding	Pmpca	ENSMUST00000076431	protein_coding	principal1	2	1	26389339	3135
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000131817	retained_intron		7	1	44468050	827
ENSMUSG00000038497	protein_coding	Tmco3	ENSMUST00000210063	retained_intron		8	1	13288190	2723
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000218598	protein_coding		10	-1	49783259	3245
ENSMUSG00000061724	processed_pseudogene	Gm2423	ENSMUST00000074863	processed_pseudogene		13	-1	13232893	733
ENSMUSG00000024292	protein_coding	Cyp4f14	ENSMUST00000234538	protein_coding		17	-1	32917303	893
ENSMUSG00000038497	protein_coding	Tmco3	ENSMUST00000211402	retained_intron		8	1	13288209	1802
ENSMUSG00000026333	protein_coding	Gin1	ENSMUST00000112844	protein_coding	principal1	1	1	97770172	2046
ENSMUSG00000047507	protein_coding	Baiap3	ENSMUST00000182922	retained_intron		17	-1	25245783	505
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000219509	protein_coding		10	-1	49272805	1542
ENSMUSG00000035759	protein_coding	Bbs10	ENSMUST00000040454	protein_coding	principal1	10	1	111298679	2744
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000218441	protein_coding		10	-1	49783409	3083
ENSMUSG00000110203	processed_pseudogene	Gm45365	ENSMUST00000209489	processed_pseudogene		7	1	12157091	256
ENSMUSG00000024292	protein_coding	Cyp4f14	ENSMUST00000234797	protein_coding		17	-1	32917342	678
ENSMUSG00000036062	protein_coding	Phf24	ENSMUST00000132173	protein_coding		4	1	42916681	492
ENSMUSG00000026926	protein_coding	Pmpca	ENSMUST00000114093	protein_coding		2	1	26389348	1638
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000220330	retained_intron		10	-1	49103931	567
ENSMUSG00000029998	protein_coding	Pcyox1	ENSMUST00000032065	protein_coding	principal1	6	-1	86397154	4295
ENSMUSG00000000632	protein_coding	Sez6	ENSMUST00000142542	retained_intron		11	1	77930839	4523
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000219051	processed_transcript		10	-1	49433386	1374
ENSMUSG00000047507	protein_coding	Baiap3	ENSMUST00000182903	retained_intron		17	-1	25248127	1020
ENSMUSG00000042751	protein_coding	Nmnat2	ENSMUST00000186368	nonsense_mediated_decay		1	1	152954993	4638
ENSMUSG00000041774	protein_coding	Ydjc	ENSMUST00000231502	retained_intron		16	1	17146931	726
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000218669	protein_coding		10	-1	49535353	539
ENSMUSG00000000632	protein_coding	Sez6	ENSMUST00000138749	retained_intron		11	1	77930917	2229
ENSMUSG00000026333	protein_coding	Gin1	ENSMUST00000112842	protein_coding		1	1	97770179	1037
ENSMUSG00000024292	protein_coding	Cyp4f14	ENSMUST00000179434	protein_coding	principal1	17	-1	32917342	2207
ENSMUSG00000000632	protein_coding	Sez6	ENSMUST00000000646	protein_coding	alternative2	11	1	77931012	3964
ENSMUSG00000061602	protein_coding	Vmn1r78	ENSMUST00000228664	protein_coding	principal1	7	1	12150257	8100
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000220263	protein_coding		10	-1	49788754	2085
ENSMUSG00000026926	protein_coding	Pmpca	ENSMUST00000137686	processed_transcript		2	1	26389354	451
ENSMUSG00000041774	protein_coding	Ydjc	ENSMUST00000232479	protein_coding		16	1	17146937	3097
ENSMUSG00000029998	protein_coding	Pcyox1	ENSMUST00000204116	protein_coding		6	-1	86397141	546
ENSMUSG00000061602	protein_coding	Vmn1r78	ENSMUST00000228244	protein_coding	principal1	7	1	12150257	7931
ENSMUSG00000047507	protein_coding	Baiap3	ENSMUST00000182978	retained_intron		17	-1	25256274	608
ENSMUSG00000026926	protein_coding	Pmpca	ENSMUST00000135155	processed_transcript		2	1	26389354	439
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000238306	protein_coding	alternative2	4	1	98395791	7416
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000079751	protein_coding		10	-1	49783259	2610
ENSMUSG00000026333	protein_coding	Gin1	ENSMUST00000027571	protein_coding		1	1	97770197	2494
ENSMUSG00000029998	protein_coding	Pcyox1	ENSMUST00000131500	protein_coding		6	-1	86392343	590
ENSMUSG00000070565	protein_coding	Rasal2	ENSMUST00000078308	protein_coding	principal1	1	-1	157412595	10047
ENSMUSG00000000632	protein_coding	Sez6	ENSMUST00000155087	retained_intron		11	1	77931039	3226
ENSMUSG00000061602	protein_coding	Vmn1r78	ENSMUST00000078039	protein_coding	principal1	7	1	12152464	942
ENSMUSG00000026926	protein_coding	Pmpca	ENSMUST00000134871	processed_transcript		2	1	26389356	544
ENSMUSG00000041775	protein_coding	Mapk1ip1	ENSMUST00000119664	protein_coding	principal1	7	-1	138846273	1883
ENSMUSG00000056073	protein_coding	Grik2	ENSMUST00000105484	protein_coding	principal1	10	-1	49783259	3992
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000023157	protein_coding	principal1	16	-1	4964173	2398
ENSMUSG00000026333	protein_coding	Gin1	ENSMUST00000122925	processed_transcript		1	1	97770201	517
ENSMUSG00000000632	protein_coding	Sez6	ENSMUST00000138346	processed_transcript		11	1	77951305	813
ENSMUSG00000026926	protein_coding	Pmpca	ENSMUST00000139535	processed_transcript		2	1	26390927	785
ENSMUSG00000101120	processed_pseudogene	Gm29452	ENSMUST00000187996	processed_pseudogene		Y	1	68707611	313
ENSMUSG00000042751	protein_coding	Nmnat2	ENSMUST00000043313	protein_coding	principal1	1	1	152954998	4626
ENSMUSG00000097884	sense_intronic	Gm26543	ENSMUST00000180729	sense_intronic		10	-1	49225653	2221
ENSMUSG00000114152	transcribed_processed_pseudogene	Gm5374	ENSMUST00000222868	transcribed_processed_pseudogene		13	1	13275135	657
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000229898	retained_intron		16	-1	4942660	799
ENSMUSG00000000632	protein_coding	Sez6	ENSMUST00000151982	nonsense_mediated_decay		11	1	77953853	3424
ENSMUSG00000029998	protein_coding	Pcyox1	ENSMUST00000153723	protein_coding		6	-1	86397143	703
ENSMUSG00000114152	transcribed_processed_pseudogene	Gm5374	ENSMUST00000222910	processed_transcript		13	1	13275772	314
ENSMUSG00000026333	protein_coding	Gin1	ENSMUST00000138142	nonsense_mediated_decay		1	1	97770210	1851
ENSMUSG00000070565	protein_coding	Rasal2	ENSMUST00000132699	protein_coding		1	-1	157411934	4013
ENSMUSG00000029998	protein_coding	Pcyox1	ENSMUST00000129650	retained_intron		6	-1	86396626	779
ENSMUSG00000041774	protein_coding	Ydjc	ENSMUST00000231975	retained_intron		16	1	17146949	1623
ENSMUSG00000000632	protein_coding	Sez6	ENSMUST00000140630	protein_coding		11	1	77969011	832
ENSMUSG00000041775	protein_coding	Mapk1ip1	ENSMUST00000075667	protein_coding	principal1	7	-1	138846260	1502
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000118493	protein_coding	principal1	7	1	44468072	922
ENSMUSG00000101216	unprocessed_pseudogene	Gm29451	ENSMUST00000188862	unprocessed_pseudogene		Y	1	68744295	696
ENSMUSG00000026333	protein_coding	Gin1	ENSMUST00000188101	retained_intron		1	1	97773715	2326
ENSMUSG00000029998	protein_coding	Pcyox1	ENSMUST00000203960	retained_intron		6	-1	86397119	485
ENSMUSG00000042751	protein_coding	Nmnat2	ENSMUST00000186621	protein_coding		1	1	152955041	754
ENSMUSG00000112938	processed_pseudogene	Gm48590	ENSMUST00000222393	processed_pseudogene		13	1	13283832	416
ENSMUSG00000070565	protein_coding	Rasal2	ENSMUST00000129880	protein_coding		1	-1	157244490	1679
ENSMUSG00000117787	processed_pseudogene	Gm50177	ENSMUST00000236834	processed_pseudogene		18	1	79669882	312
ENSMUSG00000000632	protein_coding	Sez6	ENSMUST00000126866	retained_intron		11	1	77973173	467
ENSMUSG00000026333	protein_coding	Gin1	ENSMUST00000189031	nonsense_mediated_decay		1	1	97777399	417
ENSMUSG00000070565	protein_coding	Rasal2	ENSMUST00000134543	protein_coding		1	-1	157256682	641
ENSMUSG00000041775	protein_coding	Mapk1ip1	ENSMUST00000118810	protein_coding	principal1	7	-1	138846257	1350
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000130220	retained_intron		7	1	44468076	739
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000229477	retained_intron		16	-1	4944241	1372
ENSMUSG00000117709	processed_pseudogene	Gm50178	ENSMUST00000237884	processed_pseudogene		18	-1	79701257	225
ENSMUSG00000042751	protein_coding	Nmnat2	ENSMUST00000185241	processed_transcript		1	1	152955274	336
ENSMUSG00000107578	processed_pseudogene	Gm32536	ENSMUST00000205209	processed_pseudogene		6	-1	124951765	445
ENSMUSG00000117963	processed_pseudogene	Gm19062	ENSMUST00000237996	processed_pseudogene		18	-1	79861899	2245
ENSMUSG00000042751	protein_coding	Nmnat2	ENSMUST00000187569	retained_intron		1	1	153033374	525
ENSMUSG00000070565	protein_coding	Rasal2	ENSMUST00000128538	processed_transcript		1	-1	157181441	722
ENSMUSG00000098165	processed_pseudogene	Gm26977	ENSMUST00000183151	processed_pseudogene		18	-1	79876582	996
ENSMUSG00000070565	protein_coding	Rasal2	ENSMUST00000143358	protein_coding		1	-1	157231191	654
ENSMUSG00000042751	protein_coding	Nmnat2	ENSMUST00000190960	processed_transcript		1	1	153093480	539
ENSMUSG00000117669	processed_pseudogene	Gm5509	ENSMUST00000235834	processed_pseudogene		18	1	79934332	1230
ENSMUSG00000041769	protein_coding	Ppp2r2d	ENSMUST00000128157	retained_intron		7	1	138846079	3823
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000230083	retained_intron		16	-1	4953883	2144
ENSMUSG00000099969	antisense	Gm28960	ENSMUST00000190117	antisense		1	-1	153089507	99
ENSMUSG00000070565	protein_coding	Rasal2	ENSMUST00000143080	retained_intron		1	-1	157412595	2858
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000136609	nonsense_mediated_decay		7	1	44468085	588
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000230466	retained_intron		16	-1	4946470	592
ENSMUSG00000117722	processed_pseudogene	Gm18910	ENSMUST00000237311	processed_pseudogene		18	1	79936152	802
ENSMUSG00000102326	TEC	Gm37788	ENSMUST00000193958	TEC		1	-1	157350043	2705
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000229765	protein_coding		16	-1	4964204	1779
ENSMUSG00000117813	processed_pseudogene	Gm5823	ENSMUST00000237811	processed_pseudogene		18	1	79959006	534
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000041284	protein_coding	principal2	4	1	98395791	7340
ENSMUSG00000103808	TEC	Gm37060	ENSMUST00000194997	TEC		1	-1	157406721	2397
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000229272	protein_coding		16	-1	4948342	608
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000149341	processed_transcript		7	1	44468089	586
ENSMUSG00000041774	protein_coding	Ydjc	ENSMUST00000231493	nonsense_mediated_decay		16	1	17146976	712
ENSMUSG00000061510	bidirectional_promoter_lncRNA	Gm10101	ENSMUST00000181311	bidirectional_promoter_lncRNA		14	-1	46832027	2919
ENSMUSG00000117759	transcribed_processed_pseudogene	AA684185	ENSMUST00000235997	processed_transcript		18	1	80012390	630
ENSMUSG00000087632	processed_pseudogene	Gm6058	ENSMUST00000154261	processed_pseudogene		1	-1	157384329	399
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000229017	protein_coding		16	-1	4957762	739
ENSMUSG00000061510	bidirectional_promoter_lncRNA	Gm10101	ENSMUST00000074862	bidirectional_promoter_lncRNA		14	-1	46832027	2914
ENSMUSG00000117759	transcribed_processed_pseudogene	AA684185	ENSMUST00000235145	transcribed_processed_pseudogene		18	1	80012635	246
ENSMUSG00000041774	protein_coding	Ydjc	ENSMUST00000231708	nonsense_mediated_decay		16	1	17146976	842
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000230493	retained_intron		16	-1	4953893	476
ENSMUSG00000104135	processed_pseudogene	Gm36953	ENSMUST00000195295	processed_pseudogene		3	-1	93500300	268
ENSMUSG00000041774	protein_coding	Ydjc	ENSMUST00000232344	protein_coding		16	1	17146976	1580
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000107033	protein_coding		4	1	98395855	3624
ENSMUSG00000001739	protein_coding	Cldn15	ENSMUST00000111093	protein_coding	principal1	5	1	136966616	1902
ENSMUSG00000036615	protein_coding	Rfxap	ENSMUST00000044373	protein_coding	principal1	3	-1	54807791	2162
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000107034	protein_coding		4	1	98395855	4799
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000136679	nonsense_mediated_decay		7	1	44468089	1348
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000107030	protein_coding		4	1	98395892	2104
ENSMUSG00000036615	protein_coding	Rfxap	ENSMUST00000182246	processed_transcript		3	-1	54805766	478
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000230721	processed_transcript		16	-1	4964192	668
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000121922	protein_coding		7	1	44468094	684
ENSMUSG00000105460	TEC	Gm42671	ENSMUST00000198013	TEC		3	1	95588971	1604
ENSMUSG00000036615	protein_coding	Rfxap	ENSMUST00000182084	processed_transcript		3	-1	54807420	287
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000230771	processed_transcript		16	-1	4964205	360
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000136675	processed_transcript		4	1	98416599	689
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000208117	protein_coding		7	1	44468123	315
ENSMUSG00000041774	protein_coding	Ydjc	ENSMUST00000069064	protein_coding	principal1	16	1	17146979	1297
ENSMUSG00000029452	protein_coding	Tmem116	ENSMUST00000124247	nonsense_mediated_decay		5	1	121452575	1330
ENSMUSG00000022515	protein_coding	Anks3	ENSMUST00000229077	retained_intron		16	-1	4964197	537
ENSMUSG00000024125	protein_coding	Sbpl	ENSMUST00000235047	protein_coding	principal1	17	-1	23955274	878
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000141965	processed_transcript		4	1	98436943	612
ENSMUSG00000069011	processed_pseudogene	Gm10254	ENSMUST00000052888	processed_pseudogene		3	-1	54811250	867
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000133656	retained_intron		7	1	44468151	1128
ENSMUSG00000001739	protein_coding	Cldn15	ENSMUST00000128391	processed_transcript		5	1	136973954	621
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000155659	retained_intron		7	1	44468182	397
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000142103	protein_coding		4	1	98441076	1637
ENSMUSG00000041774	protein_coding	Ydjc	ENSMUST00000231539	retained_intron		16	1	17146983	704
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000225717	retained_intron		14	-1	30082758	4918
ENSMUSG00000027907	protein_coding	S100a11	ENSMUST00000029515	protein_coding	principal1	3	1	93520488	511
ENSMUSG00000038695	protein_coding	Josd2	ENSMUST00000139097	nonsense_mediated_decay		7	1	44468826	662
ENSMUSG00000001739	protein_coding	Cldn15	ENSMUST00000001790	protein_coding	principal1	5	1	136967869	1850
ENSMUSG00000056306	protein_coding	Sertm1	ENSMUST00000162201	protein_coding	principal1	3	-1	54915031	2899
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000107029	protein_coding		4	1	98450570	4342
ENSMUSG00000103031	processed_pseudogene	Gm29950	ENSMUST00000195273	processed_pseudogene		3	-1	93530745	237
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000087360	protein_coding		5	1	53555834	5252
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000135606	processed_transcript		4	1	98495056	3004
ENSMUSG00000085162	lincRNA	Gm12295	ENSMUST00000128453	lincRNA		11	-1	65287833	3189
ENSMUSG00000056306	protein_coding	Sertm1	ENSMUST00000070342	protein_coding	principal1	3	-1	54915887	3083
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000134901	protein_coding		4	1	98518971	644
ENSMUSG00000085162	lincRNA	Gm12295	ENSMUST00000130362	lincRNA		11	-1	65365798	569
ENSMUSG00000109118	bidirectional_promoter_lncRNA	Gm32031	ENSMUST00000208993	bidirectional_promoter_lncRNA		7	1	47008083	649
ENSMUSG00000020974	protein_coding	Pole2	ENSMUST00000221411	protein_coding		12	-1	69228179	1641
ENSMUSG00000109118	bidirectional_promoter_lncRNA	Gm32031	ENSMUST00000208046	bidirectional_promoter_lncRNA		7	1	47008545	334
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000102792	protein_coding		4	1	98546734	3755
ENSMUSG00000079258	protein_coding	Calhm1	ENSMUST00000111813	protein_coding	principal1	19	-1	47144254	1253
ENSMUSG00000109118	bidirectional_promoter_lncRNA	Gm32031	ENSMUST00000208927	bidirectional_promoter_lncRNA		7	1	47008545	393
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000094657	protein_coding	principal1	4	1	132535550	1401
ENSMUSG00000094219	protein_coding	Calhm3	ENSMUST00000178630	protein_coding	principal1	19	-1	47157764	1044
ENSMUSG00000054766	protein_coding	Set	ENSMUST00000134364	protein_coding		2	1	30057378	790
ENSMUSG00000038497	protein_coding	Tmco3	ENSMUST00000045229	protein_coding	principal1	8	1	13288211	4335
ENSMUSG00000054766	protein_coding	Set	ENSMUST00000149578	protein_coding		2	1	30061754	633
ENSMUSG00000061859	protein_coding	Patj	ENSMUST00000030290	protein_coding		4	1	98546973	2495
ENSMUSG00000086172	antisense	2700068H02Rik	ENSMUST00000137882	antisense		4	-1	106557897	1872
ENSMUSG00000004934	protein_coding	Pias4	ENSMUST00000005064	protein_coding	principal1	10	-1	81167923	2571
ENSMUSG00000020974	protein_coding	Pole2	ENSMUST00000021359	protein_coding	principal1	12	-1	69228195	1706
ENSMUSG00000038497	protein_coding	Tmco3	ENSMUST00000211645	processed_transcript		8	1	13288238	2208
ENSMUSG00000020974	protein_coding	Pole2	ENSMUST00000221806	retained_intron		12	-1	69213901	1237
ENSMUSG00000041769	protein_coding	Ppp2r2d	ENSMUST00000041097	protein_coding	principal1	7	1	138846359	2081
ENSMUSG00000038965	protein_coding	Ube2l3	ENSMUST00000232139	protein_coding	principal1	16	-1	17202649	2906
ENSMUSG00000038497	protein_coding	Tmco3	ENSMUST00000210402	retained_intron		8	1	13294454	821
ENSMUSG00000024125	protein_coding	Sbpl	ENSMUST00000024939	protein_coding	principal1	17	-1	23954919	870
ENSMUSG00000038497	protein_coding	Tmco3	ENSMUST00000210600	protein_coding		8	1	13310215	712
ENSMUSG00000038965	protein_coding	Ube2l3	ENSMUST00000232668	protein_coding		16	-1	17201459	1025
ENSMUSG00000113786	protein_coding	Gm49384	ENSMUST00000222699	nonsense_mediated_decay	principal1	12	-1	69204267	945
ENSMUSG00000038965	protein_coding	Ube2l3	ENSMUST00000231643	protein_coding		16	-1	17201470	650
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000142281	retained_intron		4	1	132535567	1837
ENSMUSG00000038965	protein_coding	Ube2l3	ENSMUST00000232594	protein_coding		16	-1	17176507	454
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000144073	nonsense_mediated_decay		4	1	132535576	452
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000105940	protein_coding		4	1	132535577	772
ENSMUSG00000038965	protein_coding	Ube2l3	ENSMUST00000232514	nonsense_mediated_decay		16	-1	17176469	458
ENSMUSG00000000560	protein_coding	Gabra2	ENSMUST00000197284	protein_coding	principal1	5	-1	71095849	5852
ENSMUSG00000049751	protein_coding	Rpl36al	ENSMUST00000110620	protein_coding	principal1	12	-1	69183986	757
ENSMUSG00000105153	lincRNA	Gm3143	ENSMUST00000196308	lincRNA		3	-1	34716660	580
ENSMUSG00000004934	protein_coding	Pias4	ENSMUST00000134017	retained_intron		10	-1	81156124	797
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000067467	nonsense_mediated_decay		4	1	132535581	508
ENSMUSG00000038965	protein_coding	Ube2l3	ENSMUST00000232035	protein_coding		16	-1	17201473	3015
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000105939	protein_coding		4	1	132535581	746
ENSMUSG00000038965	protein_coding	Ube2l3	ENSMUST00000231557	processed_transcript		16	-1	17173355	298
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000138334	nonsense_mediated_decay		4	1	132535640	613
ENSMUSG00000004934	protein_coding	Pias4	ENSMUST00000147436	retained_intron		10	-1	81158011	771
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000150207	protein_coding		4	1	132535659	932
ENSMUSG00000049751	protein_coding	Rpl36al	ENSMUST00000110619	protein_coding	principal1	12	-1	69184013	1276
ENSMUSG00000038497	protein_coding	Tmco3	ENSMUST00000210762	processed_transcript		8	1	13313172	1003
ENSMUSG00000004934	protein_coding	Pias4	ENSMUST00000135765	protein_coding		10	-1	81157259	214
ENSMUSG00000067158	protein_coding	Col4a4	ENSMUST00000087050	protein_coding	principal1	1	-1	82586849	10108
ENSMUSG00000041187	protein_coding	Prkd2	ENSMUST00000168093	protein_coding	principal1	7	1	16842902	3251
ENSMUSG00000049516	protein_coding	Spty2d1	ENSMUST00000061639	protein_coding	principal1	7	-1	47008411	5223
ENSMUSG00000041769	protein_coding	Ppp2r2d	ENSMUST00000148453	nonsense_mediated_decay		7	1	138846386	623
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000105938	retained_intron		4	1	132536028	782
ENSMUSG00000038497	protein_coding	Tmco3	ENSMUST00000211517	processed_transcript		8	1	13313185	883
ENSMUSG00000004934	protein_coding	Pias4	ENSMUST00000129549	retained_intron		10	-1	81167714	1178
ENSMUSG00000038497	protein_coding	Tmco3	ENSMUST00000210750	processed_transcript		8	1	13317636	1057
ENSMUSG00000105153	lincRNA	Gm3143	ENSMUST00000198364	lincRNA		3	-1	34716662	675
ENSMUSG00000020913	protein_coding	Krt24	ENSMUST00000017255	protein_coding	principal1	11	-1	99285262	1847
ENSMUSG00000041769	protein_coding	Ppp2r2d	ENSMUST00000152104	processed_transcript		7	1	138846587	451
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000156385	protein_coding		4	1	132546659	505
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000037618	protein_coding		5	1	53590214	5459
ENSMUSG00000049516	protein_coding	Spty2d1	ENSMUST00000208588	retained_intron		7	-1	47008235	1726
ENSMUSG00000107742	TEC	9530085L11Rik	ENSMUST00000203963	TEC		8	-1	13287466	2115
ENSMUSG00000112246	lincRNA	Gm40761	ENSMUST00000219123	lincRNA		10	1	111337124	1153
ENSMUSG00000054405	protein_coding	Dnajc8	ENSMUST00000105937	retained_intron		4	1	132551295	743
ENSMUSG00000118570	unprocessed_pseudogene	AL928616.2	ENSMUST00000238875	unprocessed_pseudogene		2	1	84564745	690
ENSMUSG00000096108	IG_V_gene	Ighv11-2	ENSMUST00000103468	IG_V_gene	principal1	12	-1	114048812	461
ENSMUSG00000038965	protein_coding	Ube2l3	ENSMUST00000090192	protein_coding	principal1	16	-1	17201492	2609
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000201912	protein_coding		5	1	53590368	5485
ENSMUSG00000041769	protein_coding	Ppp2r2d	ENSMUST00000155672	protein_coding		7	1	138846595	1938
ENSMUSG00000118521	processed_pseudogene	AL928616.1	ENSMUST00000238924	processed_pseudogene		2	-1	84592840	305
ENSMUSG00000041187	protein_coding	Prkd2	ENSMUST00000086104	protein_coding	principal1	7	1	16843065	3628
ENSMUSG00000108280	processed_pseudogene	Gm8703	ENSMUST00000203793	processed_pseudogene		6	-1	128214014	730
ENSMUSG00000103745	processed_pseudogene	Gm38237	ENSMUST00000193366	processed_pseudogene		3	-1	50598444	376
ENSMUSG00000000560	protein_coding	Gabra2	ENSMUST00000198625	nonsense_mediated_decay		5	-1	71095809	3867
ENSMUSG00000000560	protein_coding	Gabra2	ENSMUST00000197124	retained_intron		5	-1	71013684	2628
ENSMUSG00000049751	protein_coding	Rpl36al	ENSMUST00000054544	protein_coding	principal1	12	-1	69184083	526
ENSMUSG00000102715	processed_transcript	Gm6209	ENSMUST00000194629	lincRNA		3	-1	50607223	1506
ENSMUSG00000000560	protein_coding	Gabra2	ENSMUST00000000572	nonsense_mediated_decay		5	-1	71094640	2245
ENSMUSG00000038560	protein_coding	Sp6	ENSMUST00000047997	protein_coding	principal1	11	1	97013394	3546
ENSMUSG00000093896	IG_V_gene	Ighv1-76	ENSMUST00000197537	IG_V_gene		12	-1	115848331	368
ENSMUSG00000041187	protein_coding	Prkd2	ENSMUST00000205841	processed_transcript		7	1	16844161	396
ENSMUSG00000067158	protein_coding	Col4a4	ENSMUST00000135271	retained_intron		1	-1	82586792	1263
ENSMUSG00000054766	protein_coding	Set	ENSMUST00000102866	protein_coding	principal3	2	1	30061853	2824
ENSMUSG00000093896	IG_V_gene	Ighv1-76	ENSMUST00000169155	IG_V_gene	principal1	12	-1	115848174	294
ENSMUSG00000041187	protein_coding	Prkd2	ENSMUST00000205999	processed_transcript		7	1	16845233	370
ENSMUSG00000113149	protein_coding	Gm49383	ENSMUST00000223192	protein_coding	principal1	12	-1	69197104	1147
ENSMUSG00000108425	antisense	Gm44706	ENSMUST00000206822	antisense		7	1	79740678	815
ENSMUSG00000000560	protein_coding	Gabra2	ENSMUST00000199861	processed_transcript		5	-1	71095200	684
ENSMUSG00000038560	protein_coding	Sp6	ENSMUST00000107622	protein_coding	principal1	11	1	97018733	3621
ENSMUSG00000041769	protein_coding	Ppp2r2d	ENSMUST00000136824	nonsense_mediated_decay		7	1	138846620	752
ENSMUSG00000116935	processed_pseudogene	Gpr31a	ENSMUST00000231254	processed_pseudogene		17	-1	7315846	959
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000113865	protein_coding	principal1	5	1	53590471	5440
ENSMUSG00000064310	protein_coding	Zpld1	ENSMUST00000143914	protein_coding	principal1	16	-1	55297986	2697
ENSMUSG00000000560	protein_coding	Gabra2	ENSMUST00000199012	retained_intron		5	-1	71094865	672
ENSMUSG00000102715	processed_transcript	Gm6209	ENSMUST00000193264	retained_intron		3	-1	50584376	2275
ENSMUSG00000041769	protein_coding	Ppp2r2d	ENSMUST00000140047	processed_transcript		7	1	138846860	435
ENSMUSG00000102895	TEC	5830415G21Rik	ENSMUST00000192543	TEC		3	-1	50576517	1332
ENSMUSG00000087067	processed_transcript	Gm11532	ENSMUST00000128111	processed_transcript		11	-1	97026248	5272
ENSMUSG00000118176	processed_pseudogene	Gm50179	ENSMUST00000237539	processed_pseudogene		18	1	80013258	262
ENSMUSG00000064310	protein_coding	Zpld1	ENSMUST00000036412	protein_coding	principal1	16	-1	55283237	2589
ENSMUSG00000106482	IG_V_pseudogene	Ighv8-16	ENSMUST00000199258	IG_V_pseudogene		12	-1	115858301	294
ENSMUSG00000041187	protein_coding	Prkd2	ENSMUST00000205386	retained_intron		7	1	16845801	1056
ENSMUSG00000041769	protein_coding	Ppp2r2d	ENSMUST00000174090	processed_transcript		7	1	138860837	779
ENSMUSG00000118357	processed_pseudogene	Gm36627	ENSMUST00000237241	processed_pseudogene		18	1	80016285	246
ENSMUSG00000097061	bidirectional_promoter_lncRNA	9330151L19Rik	ENSMUST00000181850	bidirectional_promoter_lncRNA		12	1	69197211	2545
ENSMUSG00000106519	lincRNA	Gm38509	ENSMUST00000197492	lincRNA		3	1	34772075	1150
ENSMUSG00000041769	protein_coding	Ppp2r2d	ENSMUST00000172764	nonsense_mediated_decay		7	1	138868410	700
ENSMUSG00000118304	processed_pseudogene	Gm36718	ENSMUST00000236770	processed_pseudogene		18	1	80019554	246
ENSMUSG00000041187	protein_coding	Prkd2	ENSMUST00000205456	retained_intron		7	1	16848709	779
ENSMUSG00000096452	IG_V_gene	Ighv1-77	ENSMUST00000198777	IG_V_gene		12	-1	115862355	406
ENSMUSG00000095642	IG_V_gene	Ighv14-3	ENSMUST00000103469	IG_V_gene	principal1	12	-1	114060321	399
ENSMUSG00000054766	protein_coding	Set	ENSMUST00000125824	processed_transcript		2	1	30062601	1112
ENSMUSG00000096452	IG_V_gene	Ighv1-77	ENSMUST00000170551	IG_V_gene	principal1	12	-1	115862160	294
ENSMUSG00000101600	lincRNA	4930599A14Rik	ENSMUST00000186724	lincRNA		1	-1	126876589	387
ENSMUSG00000043998	protein_coding	Mgat2	ENSMUST00000060579	protein_coding	principal1	12	1	69184157	2614
ENSMUSG00000041187	protein_coding	Prkd2	ENSMUST00000206510	retained_intron		7	1	16863347	1115
ENSMUSG00000101600	lincRNA	4930599A14Rik	ENSMUST00000188266	lincRNA		1	-1	126876615	353
ENSMUSG00000107946	lincRNA	Gm44066	ENSMUST00000203263	lincRNA		6	-1	128843171	519
ENSMUSG00000054766	protein_coding	Set	ENSMUST00000067996	protein_coding	alternative2	2	1	30066456	2834
ENSMUSG00000113190	antisense	Gm47545	ENSMUST00000220745	antisense		12	1	69227926	523
ENSMUSG00000101385	processed_pseudogene	Gm5261	ENSMUST00000185860	processed_pseudogene		1	-1	127050696	713
ENSMUSG00000041187	protein_coding	Prkd2	ENSMUST00000205798	retained_intron		7	1	16869252	636
ENSMUSG00000029452	protein_coding	Tmem116	ENSMUST00000150805	protein_coding		5	1	121452575	1424
ENSMUSG00000054766	protein_coding	Set	ENSMUST00000137291	processed_transcript		2	1	30067193	952
ENSMUSG00000076661	IG_V_gene	Ighv16-1	ENSMUST00000195641	IG_V_gene		12	-1	114069281	353
ENSMUSG00000076661	IG_V_gene	Ighv16-1	ENSMUST00000103470	IG_V_gene	principal1	12	-1	114069126	299
ENSMUSG00000054766	protein_coding	Set	ENSMUST00000147590	processed_transcript		2	1	30070170	844
ENSMUSG00000096326	IG_V_gene	Ighv1-78	ENSMUST00000199373	IG_V_gene		12	-1	115869227	376
ENSMUSG00000108213	lincRNA	Gm44172	ENSMUST00000203903	lincRNA		6	1	71451992	1235
ENSMUSG00000104129	IG_V_pseudogene	Ighv6-2	ENSMUST00000192430	IG_V_pseudogene		12	-1	114089681	295
ENSMUSG00000096326	IG_V_gene	Ighv1-78	ENSMUST00000163670	IG_V_gene	principal1	12	-1	115869066	294
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000201883	protein_coding		5	1	53590981	4961
ENSMUSG00000107460	TEC	Gm44186	ENSMUST00000204118	TEC		6	-1	71466062	2752
ENSMUSG00000028480	protein_coding	Glipr2	ENSMUST00000030202	protein_coding	principal1	4	1	43957401	2320
ENSMUSG00000117989	processed_pseudogene	Gm9066	ENSMUST00000235833	processed_pseudogene		19	-1	37723423	637
ENSMUSG00000108095	lincRNA	Gm44067	ENSMUST00000203350	lincRNA		6	-1	128846959	2971
ENSMUSG00000117939	processed_pseudogene	Gm9067	ENSMUST00000236017	processed_pseudogene		19	1	37784266	1319
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000106364	protein_coding	principal1	7	-1	126704220	1747
ENSMUSG00000028480	protein_coding	Glipr2	ENSMUST00000107855	protein_coding		4	1	43957692	1816
ENSMUSG00000030545	protein_coding	Pex11a	ENSMUST00000032761	protein_coding	principal1	7	-1	79743080	2241
ENSMUSG00000029452	protein_coding	Tmem116	ENSMUST00000145729	nonsense_mediated_decay		5	1	121452625	445
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000201928	processed_transcript		5	1	53619436	548
ENSMUSG00000021660	protein_coding	Btf3	ENSMUST00000022163	protein_coding	principal3	13	-1	98316967	1091
ENSMUSG00000029452	protein_coding	Tmem116	ENSMUST00000172722	processed_transcript		5	1	121452706	232
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000032949	protein_coding	principal1	7	-1	126704816	1660
ENSMUSG00000029452	protein_coding	Tmem116	ENSMUST00000156080	protein_coding	alternative2	5	1	121453309	1184
ENSMUSG00000020973	protein_coding	Dnaaf2	ENSMUST00000021356	protein_coding	principal1	12	-1	69198429	3390
ENSMUSG00000036949	protein_coding	Slc39a12	ENSMUST00000114731	protein_coding	alternative2	2	1	14388316	2648
ENSMUSG00000070999	protein_coding	Ccin	ENSMUST00000095107	protein_coding	principal1	4	1	43983483	1941
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000173108	protein_coding		7	-1	126703173	1170
ENSMUSG00000030545	protein_coding	Pex11a	ENSMUST00000150606	processed_transcript		7	-1	79743131	1044
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000200856	processed_transcript		5	1	53624914	499
ENSMUSG00000030545	protein_coding	Pex11a	ENSMUST00000205297	retained_intron		7	-1	79738724	1475
ENSMUSG00000030545	protein_coding	Pex11a	ENSMUST00000139620	retained_intron		7	-1	79740356	331
ENSMUSG00000097413	lincRNA	A830052D11Rik	ENSMUST00000234930	lincRNA		18	-1	32377052	634
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000201701	processed_transcript		5	1	53625077	516
ENSMUSG00000097413	lincRNA	A830052D11Rik	ENSMUST00000181729	lincRNA		18	-1	32377823	669
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000202476	retained_intron		5	1	53638632	3436
ENSMUSG00000107633	TEC	Gm44078	ENSMUST00000204652	TEC		6	-1	128865194	2646
ENSMUSG00000097413	lincRNA	A830052D11Rik	ENSMUST00000234978	lincRNA		18	-1	32378278	648
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000133718	retained_intron		7	-1	126701227	602
ENSMUSG00000097413	lincRNA	A830052D11Rik	ENSMUST00000234408	lincRNA		18	-1	32377892	708
ENSMUSG00000039191	protein_coding	Rbpj	ENSMUST00000202092	retained_intron		5	1	53645738	678
ENSMUSG00000021660	protein_coding	Btf3	ENSMUST00000152704	protein_coding	alternative1	13	-1	98317006	888
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000174579	retained_intron		7	-1	126701260	520
ENSMUSG00000107111	antisense	Gm40304	ENSMUST00000202154	antisense		5	-1	53547322	268
ENSMUSG00000060586	protein_coding	H2-Eb1	ENSMUST00000235530	protein_coding	principal1	17	1	34305867	1669
ENSMUSG00000026159	protein_coding	Agfg1	ENSMUST00000189220	protein_coding	principal2	1	1	82839483	8044
ENSMUSG00000102465	TEC	Gm38198	ENSMUST00000191772	TEC		1	-1	25738969	3581
ENSMUSG00000021660	protein_coding	Btf3	ENSMUST00000133461	retained_intron		13	-1	98311515	839
ENSMUSG00000102407	TEC	Gm37862	ENSMUST00000193079	TEC		1	-1	25328398	2533
ENSMUSG00000021660	protein_coding	Btf3	ENSMUST00000134542	protein_coding	alternative1	13	-1	98316376	780
ENSMUSG00000036949	protein_coding	Slc39a12	ENSMUST00000082290	protein_coding	principal2	2	1	14388399	2675
ENSMUSG00000080849	processed_pseudogene	Gm15702	ENSMUST00000119680	processed_pseudogene		1	1	25223730	444
ENSMUSG00000031827	protein_coding	Cotl1	ENSMUST00000034285	protein_coding	principal1	8	-1	119840544	1596
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000123511	retained_intron		7	-1	126702095	824
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000205515	protein_coding		7	-1	126703174	739
ENSMUSG00000102747	TEC	Gm37602	ENSMUST00000195187	TEC		1	-1	25807406	3310
ENSMUSG00000021494	protein_coding	Ddx41	ENSMUST00000224765	protein_coding		13	-1	55536658	2199
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000140896	retained_intron		7	-1	126702472	862
ENSMUSG00000036949	protein_coding	Slc39a12	ENSMUST00000133258	protein_coding		2	1	14388512	536
ENSMUSG00000060586	protein_coding	H2-Eb1	ENSMUST00000236232	nonsense_mediated_decay		17	1	34305926	1082
ENSMUSG00000103563	TEC	8030445P17Rik	ENSMUST00000192614	TEC		1	-1	25724778	2741
ENSMUSG00000103209	TEC	Gm37331	ENSMUST00000192367	TEC		1	-1	25299886	3375
ENSMUSG00000031827	protein_coding	Cotl1	ENSMUST00000211873	protein_coding		8	-1	119840497	826
ENSMUSG00000031827	protein_coding	Cotl1	ENSMUST00000212676	processed_transcript		8	-1	119822717	237
ENSMUSG00000002210	protein_coding	Smg9	ENSMUST00000146381	retained_intron		7	1	24399619	1620
ENSMUSG00000104221	TEC	Gm37051	ENSMUST00000194535	TEC		1	-1	25623180	2943
ENSMUSG00000060586	protein_coding	H2-Eb1	ENSMUST00000235729	retained_intron		17	1	34305934	798
ENSMUSG00000021660	protein_coding	Btf3	ENSMUST00000133826	retained_intron		13	-1	98316996	569
ENSMUSG00000103889	TEC	Gm37011	ENSMUST00000195543	TEC		1	-1	25611184	2935
ENSMUSG00000060586	protein_coding	H2-Eb1	ENSMUST00000074557	protein_coding		17	1	34306017	1171
ENSMUSG00000021494	protein_coding	Ddx41	ENSMUST00000225783	retained_intron		13	-1	55536424	710
ENSMUSG00000031827	protein_coding	Cotl1	ENSMUST00000168698	protein_coding	principal1	8	-1	119840522	1520
ENSMUSG00000103924	TEC	Gm37895	ENSMUST00000192448	TEC		1	-1	25780306	4550
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000131415	protein_coding		7	-1	126704754	824
ENSMUSG00000060586	protein_coding	H2-Eb1	ENSMUST00000235501	retained_intron		17	1	34309575	782
ENSMUSG00000102317	TEC	Gm37628	ENSMUST00000194644	TEC		1	-1	25691501	5440
ENSMUSG00000026925	protein_coding	Inpp5e	ENSMUST00000145701	protein_coding	principal3	2	-1	26409200	4147
ENSMUSG00000104027	TEC	Gm37211	ENSMUST00000193392	TEC		1	-1	25317708	3433
ENSMUSG00000021494	protein_coding	Ddx41	ENSMUST00000224686	retained_intron		13	-1	55536521	835
ENSMUSG00000030806	protein_coding	Stx1b	ENSMUST00000106267	protein_coding	principal1	7	-1	127824549	4536
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000135087	protein_coding		7	-1	126704547	471
ENSMUSG00000103214	TEC	Gm38286	ENSMUST00000195128	TEC		1	-1	25349082	3105
ENSMUSG00000048603	bidirectional_promoter_lncRNA	Gm9828	ENSMUST00000126622	bidirectional_promoter_lncRNA		13	1	98317069	1446
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000173116	protein_coding		7	-1	126707787	388
ENSMUSG00000096805	IG_V_gene	Ighv9-1	ENSMUST00000195884	IG_V_gene		12	-1	114094358	351
ENSMUSG00000103004	TEC	2900002M20Rik	ENSMUST00000195754	TEC		1	-1	25824719	330
ENSMUSG00000021494	protein_coding	Ddx41	ENSMUST00000224125	retained_intron		13	-1	55536510	705
ENSMUSG00000026925	protein_coding	Inpp5e	ENSMUST00000131109	protein_coding		2	-1	26399471	694
ENSMUSG00000048603	bidirectional_promoter_lncRNA	Gm9828	ENSMUST00000135572	bidirectional_promoter_lncRNA		13	1	98317116	918
ENSMUSG00000104132	TEC	Gm36952	ENSMUST00000194923	TEC		1	-1	25800905	3625
ENSMUSG00000092415	antisense	Gm20513	ENSMUST00000174074	antisense		17	-1	34305720	537
ENSMUSG00000030806	protein_coding	Stx1b	ENSMUST00000156135	protein_coding		7	-1	127810924	632
ENSMUSG00000092415	antisense	Gm20513	ENSMUST00000236664	antisense		17	-1	34308070	349
ENSMUSG00000048603	bidirectional_promoter_lncRNA	Gm9828	ENSMUST00000132488	bidirectional_promoter_lncRNA		13	1	98318706	779
ENSMUSG00000096805	IG_V_gene	Ighv9-1	ENSMUST00000103471	IG_V_gene	principal1	12	-1	114094221	294
ENSMUSG00000048603	bidirectional_promoter_lncRNA	Gm9828	ENSMUST00000062252	bidirectional_promoter_lncRNA		13	1	98316422	883
ENSMUSG00000030707	protein_coding	Coro1a	ENSMUST00000126193	retained_intron		7	-1	126704753	445
ENSMUSG00000110123	unprocessed_pseudogene	Gm18562	ENSMUST00000209949	unprocessed_pseudogene		13	1	13323364	915
ENSMUSG00000021494	protein_coding	Ddx41	ENSMUST00000021956	protein_coding	principal1	13	-1	55536658	2205
ENSMUSG00000104257	TEC	Gm20172	ENSMUST00000193138	TEC		1	-1	25277954	1551
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000101280	protein_coding		5	1	35757880	3042
ENSMUSG00000036062	protein_coding	Phf24	ENSMUST00000107975	protein_coding	principal1	4	1	42916694	6494
ENSMUSG00000104100	TEC	Gm37880	ENSMUST00000192216	TEC		1	-1	25365820	3257
ENSMUSG00000113027	unprocessed_pseudogene	Gm7040	ENSMUST00000223271	unprocessed_pseudogene		13	-1	13323370	443
ENSMUSG00000114633	antisense	Gm46416	ENSMUST00000225184	antisense		13	1	55535995	523
ENSMUSG00000100546	lincRNA	Gm29483	ENSMUST00000188188	lincRNA		1	-1	92717202	1078
ENSMUSG00000102386	TEC	2900022M07Rik	ENSMUST00000193912	TEC		1	-1	25809972	1017
ENSMUSG00000027188	protein_coding	Pamr1	ENSMUST00000028612	protein_coding	principal1	2	1	102550012	2864
ENSMUSG00000101301	processed_pseudogene	Gm29214	ENSMUST00000190216	processed_pseudogene		1	-1	25615515	570
ENSMUSG00000029056	protein_coding	Pank4	ENSMUST00000030931	protein_coding	principal1	4	1	154964123	2508
ENSMUSG00000102659	TEC	Gm37077	ENSMUST00000195723	TEC		1	-1	25759033	3691
ENSMUSG00000102296	TEC	Gm37543	ENSMUST00000192443	TEC		1	-1	25285248	1031
ENSMUSG00000029452	protein_coding	Tmem116	ENSMUST00000094357	protein_coding	alternative2	5	1	121463152	1366
ENSMUSG00000100201	sense_intronic	Gm29093	ENSMUST00000187366	sense_intronic		10	-1	80589790	409
ENSMUSG00000025330	protein_coding	Padi4	ENSMUST00000026381	protein_coding	principal1	4	-1	140774236	2316
ENSMUSG00000100032	protein_coding	Gm20817	ENSMUST00000191123	protein_coding	principal1	Y	-1	68832728	923
ENSMUSG00000027188	protein_coding	Pamr1	ENSMUST00000144333	retained_intron		2	1	102550149	2184
ENSMUSG00000029056	protein_coding	Pank4	ENSMUST00000070953	protein_coding		4	1	154964133	2706
ENSMUSG00000046519	protein_coding	Golph3l	ENSMUST00000177390	protein_coding	principal1	3	1	95588934	2836
ENSMUSG00000026925	protein_coding	Inpp5e	ENSMUST00000028291	processed_transcript		2	-1	26409184	3413
ENSMUSG00000027188	protein_coding	Pamr1	ENSMUST00000139090	processed_transcript		2	1	102550070	2120
ENSMUSG00000101080	lincRNA	Gm28633	ENSMUST00000190867	lincRNA		Y	-1	68901325	1485
ENSMUSG00000025330	protein_coding	Padi4	ENSMUST00000137516	processed_transcript		4	-1	140757925	724
ENSMUSG00000101080	lincRNA	Gm28633	ENSMUST00000187906	lincRNA		Y	-1	68900872	608
ENSMUSG00000114099	bidirectional_promoter_lncRNA	Gm48695	ENSMUST00000221641	bidirectional_promoter_lncRNA		12	1	70113574	733
ENSMUSG00000029452	protein_coding	Tmem116	ENSMUST00000031405	protein_coding	alternative2	5	1	121463152	1288
ENSMUSG00000027188	protein_coding	Pamr1	ENSMUST00000143071	retained_intron		2	1	102636025	570
ENSMUSG00000026925	protein_coding	Inpp5e	ENSMUST00000114090	protein_coding	alternative2	2	-1	26409127	2790
ENSMUSG00000025330	protein_coding	Padi4	ENSMUST00000143019	processed_transcript		4	-1	140761777	3021
ENSMUSG00000026159	protein_coding	Agfg1	ENSMUST00000113444	protein_coding		1	1	82839497	3142
ENSMUSG00000046519	protein_coding	Golph3l	ENSMUST00000176674	protein_coding		3	1	95588969	991
ENSMUSG00000029452	protein_coding	Tmem116	ENSMUST00000149966	protein_coding		5	1	121463737	757
ENSMUSG00000026925	protein_coding	Inpp5e	ENSMUST00000146061	processed_transcript		2	-1	26409203	3046
ENSMUSG00000096735	protein_coding	Vmn1r79	ENSMUST00000226953	protein_coding	principal1	7	1	12171279	5636
ENSMUSG00000025330	protein_coding	Padi4	ENSMUST00000137440	processed_transcript		4	-1	140761770	403
ENSMUSG00000046519	protein_coding	Golph3l	ENSMUST00000177389	protein_coding		3	1	95588969	2611
ENSMUSG00000026925	protein_coding	Inpp5e	ENSMUST00000150907	processed_transcript		2	-1	26400476	527
ENSMUSG00000026159	protein_coding	Agfg1	ENSMUST00000190052	protein_coding		1	1	82839669	2991
ENSMUSG00000029452	protein_coding	Tmem116	ENSMUST00000060004	protein_coding	principal3	5	1	121452709	1297
ENSMUSG00000029056	protein_coding	Pank4	ENSMUST00000148934	nonsense_mediated_decay		4	1	154969999	2042
ENSMUSG00000026925	protein_coding	Inpp5e	ENSMUST00000144011	protein_coding		2	-1	26402206	618
ENSMUSG00000096735	protein_coding	Vmn1r79	ENSMUST00000227530	protein_coding	principal1	7	1	12171279	5581
ENSMUSG00000041959	protein_coding	S100a10	ENSMUST00000045756	protein_coding	principal1	3	1	93555080	685
ENSMUSG00000026159	protein_coding	Agfg1	ENSMUST00000063380	protein_coding		1	1	82839671	2896
ENSMUSG00000096735	protein_coding	Vmn1r79	ENSMUST00000062811	protein_coding	principal1	7	1	12176193	921
ENSMUSG00000047821	protein_coding	Trim16	ENSMUST00000055006	protein_coding	principal1	11	1	62820231	3906
ENSMUSG00000041959	protein_coding	S100a10	ENSMUST00000148400	retained_intron		3	1	93555163	611
ENSMUSG00000038067	protein_coding	Csf3	ENSMUST00000038886	protein_coding	principal1	11	1	98701263	1413
ENSMUSG00000046519	protein_coding	Golph3l	ENSMUST00000176755	protein_coding		3	1	95588974	2174
ENSMUSG00000041959	protein_coding	S100a10	ENSMUST00000170612	protein_coding	principal1	3	1	93560727	477
ENSMUSG00000026159	protein_coding	Agfg1	ENSMUST00000187899	protein_coding	alternative1	1	1	82839674	2078
ENSMUSG00000103406	unprocessed_pseudogene	Gm5541	ENSMUST00000193248	unprocessed_pseudogene		3	-1	93629752	1113
ENSMUSG00000047821	protein_coding	Trim16	ENSMUST00000072639	protein_coding		11	1	62820253	1929
ENSMUSG00000046519	protein_coding	Golph3l	ENSMUST00000176541	nonsense_mediated_decay		3	1	95588981	2053
ENSMUSG00000104470	TEC	Gm38207	ENSMUST00000193009	TEC		3	1	93638044	3505
ENSMUSG00000069378	protein_coding	Prdm6	ENSMUST00000236096	protein_coding		18	1	53463583	662
ENSMUSG00000046519	protein_coding	Golph3l	ENSMUST00000177399	protein_coding		3	1	95588990	568
ENSMUSG00000047821	protein_coding	Trim16	ENSMUST00000147942	processed_transcript		11	1	62820440	709
ENSMUSG00000040312	protein_coding	Cchcr1	ENSMUST00000164242	protein_coding	principal2	17	1	35517100	2656
ENSMUSG00000036062	protein_coding	Phf24	ENSMUST00000107976	protein_coding		4	1	42917251	6538
ENSMUSG00000026159	protein_coding	Agfg1	ENSMUST00000186302	protein_coding	alternative1	1	1	82839674	2352
ENSMUSG00000103362	protein_coding	Tdpoz2	ENSMUST00000191960	protein_coding	principal1	3	-1	93652686	1145
ENSMUSG00000046519	protein_coding	Golph3l	ENSMUST00000060323	protein_coding		3	1	95588934	2652
ENSMUSG00000047821	protein_coding	Trim16	ENSMUST00000108703	protein_coding		11	1	62820469	3574
ENSMUSG00000040312	protein_coding	Cchcr1	ENSMUST00000174827	retained_intron		17	1	35517116	2333
ENSMUSG00000036062	protein_coding	Phf24	ENSMUST00000069184	protein_coding		4	1	42917270	6392
ENSMUSG00000026159	protein_coding	Agfg1	ENSMUST00000190046	protein_coding		1	1	82839734	1805
ENSMUSG00000046519	protein_coding	Golph3l	ENSMUST00000098861	protein_coding		3	1	95588934	2221
ENSMUSG00000030805	protein_coding	Stx4a	ENSMUST00000152310	processed_transcript		7	1	127824294	897
ENSMUSG00000036062	protein_coding	Phf24	ENSMUST00000124380	nonsense_mediated_decay		4	1	42917334	1649
ENSMUSG00000047821	protein_coding	Trim16	ENSMUST00000128623	processed_transcript		11	1	62833800	1741
ENSMUSG00000116120	processed_pseudogene	Eif2s3x-ps1	ENSMUST00000230806	processed_pseudogene		15	-1	75968335	1109
ENSMUSG00000036062	protein_coding	Phf24	ENSMUST00000139100	protein_coding		4	1	42922268	608
ENSMUSG00000029708	protein_coding	Gcc1	ENSMUST00000090511	protein_coding	principal1	6	-1	28421724	4650
ENSMUSG00000040312	protein_coding	Cchcr1	ENSMUST00000045956	protein_coding	principal2	17	1	35517176	2748
ENSMUSG00000094084	protein_coding	Tdpoz1	ENSMUST00000181541	protein_coding	principal1	3	-1	93676310	2322
ENSMUSG00000026159	protein_coding	Agfg1	ENSMUST00000186043	protein_coding		1	1	82840073	856
ENSMUSG00000036062	protein_coding	Phf24	ENSMUST00000138425	protein_coding		4	1	42933919	768
ENSMUSG00000036845	protein_coding	Lin37	ENSMUST00000043975	protein_coding	principal1	7	-1	30559646	998
ENSMUSG00000115419	lincRNA	Gm49113	ENSMUST00000226118	lincRNA		15	-1	13761027	1284
ENSMUSG00000094084	protein_coding	Tdpoz1	ENSMUST00000094413	protein_coding	principal1	3	-1	93671569	2237
ENSMUSG00000115824	processed_pseudogene	Gm49114	ENSMUST00000226387	processed_pseudogene		15	1	13838057	513
ENSMUSG00000115551	processed_pseudogene	Gm49115	ENSMUST00000228924	processed_pseudogene		15	1	14142955	273
ENSMUSG00000036062	protein_coding	Phf24	ENSMUST00000131234	protein_coding		4	1	42938254	615
ENSMUSG00000029056	protein_coding	Pank4	ENSMUST00000105632	retained_intron		4	1	154974533	1431
ENSMUSG00000003346	protein_coding	Abhd17a	ENSMUST00000003436	protein_coding	principal1	10	-1	80590341	1468
ENSMUSG00000052384	protein_coding	Nrros	ENSMUST00000099991	protein_coding	alternative2	16	-1	32165585	2548
ENSMUSG00000029708	protein_coding	Gcc1	ENSMUST00000064377	protein_coding	principal1	6	-1	28428390	2859
ENSMUSG00000040312	protein_coding	Cchcr1	ENSMUST00000173903	protein_coding	alternative2	17	1	35517463	3054
ENSMUSG00000036845	protein_coding	Lin37	ENSMUST00000146548	retained_intron		7	-1	30556021	412
ENSMUSG00000113440	lincRNA	Gm46404	ENSMUST00000221461	lincRNA		13	-1	23445935	4114
ENSMUSG00000082934	processed_pseudogene	Gm13887	ENSMUST00000119009	processed_pseudogene		2	1	104875202	344
ENSMUSG00000095874	processed_pseudogene	Gm9630	ENSMUST00000178304	processed_pseudogene		15	1	14465785	885
ENSMUSG00000115782	lincRNA	Gm49116	ENSMUST00000227703	lincRNA		15	1	14459376	762
ENSMUSG00000040312	protein_coding	Cchcr1	ENSMUST00000173986	processed_transcript		17	1	35519886	594
ENSMUSG00000029056	protein_coding	Pank4	ENSMUST00000148299	retained_intron		4	1	154976271	892
ENSMUSG00000029708	protein_coding	Gcc1	ENSMUST00000165455	protein_coding		6	-1	28420858	609
ENSMUSG00000020114	protein_coding	Cand1	ENSMUST00000020315	protein_coding	principal1	10	-1	119240055	7766
ENSMUSG00000036845	protein_coding	Lin37	ENSMUST00000108164	protein_coding		7	-1	30559838	1312
ENSMUSG00000003346	protein_coding	Abhd17a	ENSMUST00000191440	protein_coding		10	-1	80590324	1529
ENSMUSG00000029056	protein_coding	Pank4	ENSMUST00000128297	retained_intron		4	1	154976279	737
ENSMUSG00000106271	processed_pseudogene	Gm43752	ENSMUST00000198475	processed_pseudogene		5	1	125435075	697
ENSMUSG00000040312	protein_coding	Cchcr1	ENSMUST00000173582	retained_intron		17	1	35524604	439
ENSMUSG00000003346	protein_coding	Abhd17a	ENSMUST00000189605	protein_coding		10	-1	80586624	713
ENSMUSG00000020114	protein_coding	Cand1	ENSMUST00000148802	retained_intron		10	-1	119208209	684
ENSMUSG00000029708	protein_coding	Gcc1	ENSMUST00000170767	protein_coding		6	-1	28424153	416
ENSMUSG00000040312	protein_coding	Cchcr1	ENSMUST00000172893	retained_intron		17	1	35528892	464
ENSMUSG00000036845	protein_coding	Lin37	ENSMUST00000156241	protein_coding		7	-1	30559659	791
ENSMUSG00000020114	protein_coding	Cand1	ENSMUST00000149155	retained_intron		10	-1	119212609	540
ENSMUSG00000003346	protein_coding	Abhd17a	ENSMUST00000187646	protein_coding		10	-1	80590315	392
ENSMUSG00000052384	protein_coding	Nrros	ENSMUST00000126869	protein_coding	alternative2	16	-1	32147881	2540
ENSMUSG00000029056	protein_coding	Pank4	ENSMUST00000129386	retained_intron		4	1	154976578	1532
ENSMUSG00000020114	protein_coding	Cand1	ENSMUST00000126373	protein_coding		10	-1	119239303	805
ENSMUSG00000036845	protein_coding	Lin37	ENSMUST00000149400	retained_intron		7	-1	30559639	448
ENSMUSG00000030365	protein_coding	Clec2i	ENSMUST00000032519	protein_coding	principal3	6	1	128887588	1014
ENSMUSG00000052384	protein_coding	Nrros	ENSMUST00000231836	protein_coding	alternative2	16	-1	32165476	2356
ENSMUSG00000086290	lincRNA	Snhg12	ENSMUST00000232260	lincRNA		4	1	132308623	896
ENSMUSG00000100041	processed_pseudogene	Gm5702	ENSMUST00000185629	processed_pseudogene		1	-1	108379438	2469
ENSMUSG00000109102	TEC	1700019A23Rik	ENSMUST00000208842	TEC		7	1	30539666	196
ENSMUSG00000052384	protein_coding	Nrros	ENSMUST00000115165	protein_coding	alternative2	16	-1	32165557	2389
ENSMUSG00000104478	TEC	Gm38212	ENSMUST00000194081	TEC		1	1	108417077	2756
ENSMUSG00000101231	processed_pseudogene	Gm28283	ENSMUST00000185509	processed_pseudogene		1	-1	108612514	178
ENSMUSG00000086290	lincRNA	Snhg12	ENSMUST00000126380	lincRNA		4	1	132308635	1213
ENSMUSG00000101097	processed_pseudogene	Gm6679	ENSMUST00000191467	processed_pseudogene		1	1	108770135	1869
ENSMUSG00000032034	protein_coding	Kcnj5	ENSMUST00000034533	protein_coding	principal1	9	-1	32344350	4685
ENSMUSG00000100831	processed_pseudogene	Gm17847	ENSMUST00000188261	processed_pseudogene		1	-1	108998760	1127
ENSMUSG00000087610	protein_coding	Gm16253	ENSMUST00000148290	protein_coding	principal1	3	1	96576984	550
ENSMUSG00000086290	lincRNA	Snhg12	ENSMUST00000231453	lincRNA		4	1	132308676	1368
ENSMUSG00000052384	protein_coding	Nrros	ENSMUST00000143682	protein_coding	alternative2	16	-1	32165494	3577
ENSMUSG00000036854	protein_coding	Hspb6	ENSMUST00000126989	processed_transcript		7	1	30552178	1980
ENSMUSG00000100884	processed_pseudogene	Gm28281	ENSMUST00000185658	processed_pseudogene		1	-1	109575129	187
ENSMUSG00000032034	protein_coding	Kcnj5	ENSMUST00000216033	protein_coding		9	-1	32344237	2440
ENSMUSG00000036854	protein_coding	Hspb6	ENSMUST00000123355	processed_transcript		7	1	30552524	1298
ENSMUSG00000030365	protein_coding	Clec2i	ENSMUST00000159866	protein_coding	alternative2	6	1	128887588	2330
ENSMUSG00000052384	protein_coding	Nrros	ENSMUST00000130410	protein_coding		16	-1	32165594	805
ENSMUSG00000024124	protein_coding	Prss30	ENSMUST00000024936	protein_coding	principal1	17	-1	23975241	1481
ENSMUSG00000043164	protein_coding	Tmem212	ENSMUST00000058077	protein_coding	principal1	3	-1	27896368	716
ENSMUSG00000032034	protein_coding	Kcnj5	ENSMUST00000214223	protein_coding	principal1	9	-1	32344282	3101
ENSMUSG00000069378	protein_coding	Prdm6	ENSMUST00000091900	protein_coding	principal1	18	1	53464516	2631
ENSMUSG00000052384	protein_coding	Nrros	ENSMUST00000150250	processed_transcript		16	-1	32148118	360
ENSMUSG00000024124	protein_coding	Prss30	ENSMUST00000234145	retained_intron		17	-1	23973747	1451
ENSMUSG00000024124	protein_coding	Prss30	ENSMUST00000234765	protein_coding	principal1	17	-1	23980566	1511
ENSMUSG00000097896	antisense	Gm26800	ENSMUST00000180871	antisense		16	1	57280890	349
ENSMUSG00000115208	processed_pseudogene	Gm49118	ENSMUST00000226940	processed_pseudogene		15	1	15138187	523
ENSMUSG00000030365	protein_coding	Clec2i	ENSMUST00000159080	retained_intron		6	1	128887589	2764
ENSMUSG00000114972	processed_pseudogene	Gm49119	ENSMUST00000226279	processed_pseudogene		15	-1	15325195	417
ENSMUSG00000052384	protein_coding	Nrros	ENSMUST00000144345	protein_coding		16	-1	32165482	404
ENSMUSG00000024620	protein_coding	Pdgfrb	ENSMUST00000025522	protein_coding	principal2	18	1	61045150	5407
ENSMUSG00000024124	protein_coding	Prss30	ENSMUST00000135549	protein_coding		17	-1	23974801	981
ENSMUSG00000030365	protein_coding	Clec2i	ENSMUST00000162666	protein_coding	alternative2	6	1	128887598	1091
ENSMUSG00000020440	protein_coding	Arf5	ENSMUST00000020717	protein_coding	principal1	6	1	28423560	1116
ENSMUSG00000052384	protein_coding	Nrros	ENSMUST00000136809	processed_transcript		16	-1	32165457	343
ENSMUSG00000036854	protein_coding	Hspb6	ENSMUST00000044048	protein_coding	principal1	7	1	30553268	1363
ENSMUSG00000030365	protein_coding	Clec2i	ENSMUST00000160867	protein_coding	alternative2	6	1	128887598	933
ENSMUSG00000024124	protein_coding	Prss30	ENSMUST00000123584	retained_intron		17	-1	23975174	757
ENSMUSG00000115266	lincRNA	4930557F08Rik	ENSMUST00000226912	lincRNA		15	1	15779994	441
ENSMUSG00000107733	processed_pseudogene	Gm8774	ENSMUST00000203621	processed_pseudogene		6	1	128883852	692
ENSMUSG00000020440	protein_coding	Arf5	ENSMUST00000202028	retained_intron		6	1	28423709	919
ENSMUSG00000024124	protein_coding	Prss30	ENSMUST00000151448	nonsense_mediated_decay		17	-1	23974678	844
ENSMUSG00000036854	protein_coding	Hspb6	ENSMUST00000146732	processed_transcript		7	1	30553885	350
ENSMUSG00000024620	protein_coding	Pdgfrb	ENSMUST00000115274	protein_coding	alternative2	18	1	61045200	5423
ENSMUSG00000024124	protein_coding	Prss30	ENSMUST00000147626	protein_coding		17	-1	23975198	203
ENSMUSG00000020440	protein_coding	Arf5	ENSMUST00000169841	protein_coding	principal1	6	1	28423590	768
ENSMUSG00000114832	lincRNA	Gm21388	ENSMUST00000238705	lincRNA		3	1	34826616	1670
ENSMUSG00000045671	protein_coding	Spred2	ENSMUST00000093299	protein_coding		11	1	19924375	4449
ENSMUSG00000082457	processed_pseudogene	Gm13776	ENSMUST00000122236	processed_pseudogene		2	-1	91717419	1261
ENSMUSG00000052384	protein_coding	Nrros	ENSMUST00000115163	protein_coding	principal3	16	-1	32165476	3559
ENSMUSG00000045671	protein_coding	Spred2	ENSMUST00000123036	protein_coding		11	1	19954570	745
ENSMUSG00000102274	processed_pseudogene	Gm4855	ENSMUST00000192270	processed_pseudogene		3	1	26380445	1967
ENSMUSG00000002210	protein_coding	Smg9	ENSMUST00000002280	protein_coding	principal1	7	1	24399619	2242
ENSMUSG00000045671	protein_coding	Spred2	ENSMUST00000093298	protein_coding	principal1	11	1	19924442	2852
ENSMUSG00000090164	protein_coding	BC035044	ENSMUST00000160290	protein_coding	principal2	6	-1	128891126	1568
ENSMUSG00000114832	lincRNA	Gm21388	ENSMUST00000238622	lincRNA		3	1	34826632	1122
ENSMUSG00000030805	protein_coding	Stx4a	ENSMUST00000033075	protein_coding	principal1	7	1	127841764	1456
ENSMUSG00000002210	protein_coding	Smg9	ENSMUST00000139481	retained_intron		7	1	24399724	649
ENSMUSG00000114832	lincRNA	Gm21388	ENSMUST00000225372	lincRNA		3	1	34826669	6721
ENSMUSG00000114832	lincRNA	Gm21388	ENSMUST00000238679	lincRNA		3	1	34826685	1089
ENSMUSG00000022753	protein_coding	Tmem30c	ENSMUST00000119407	protein_coding	principal1	16	-1	57292865	1396
ENSMUSG00000090164	protein_coding	BC035044	ENSMUST00000178918	protein_coding	alternative2	6	-1	128891124	466
ENSMUSG00000075269	protein_coding	Bex6	ENSMUST00000231941	protein_coding	principal1	16	1	32179823	988
ENSMUSG00000114832	lincRNA	Gm21388	ENSMUST00000238552	lincRNA		3	1	34837150	328
ENSMUSG00000086290	lincRNA	Snhg12	ENSMUST00000232301	lincRNA		4	1	132308676	1538
ENSMUSG00000106645	IG_V_pseudogene	Gm42643	ENSMUST00000200504	IG_V_pseudogene		12	-1	115882057	279
ENSMUSG00000075269	protein_coding	Bex6	ENSMUST00000231512	protein_coding	principal1	16	1	32183934	912
ENSMUSG00000030805	protein_coding	Stx4a	ENSMUST00000121705	protein_coding	principal1	7	1	127841968	1316
ENSMUSG00000086290	lincRNA	Snhg12	ENSMUST00000137343	lincRNA		4	1	132308677	1416
ENSMUSG00000002210	protein_coding	Smg9	ENSMUST00000108434	protein_coding		7	1	24399921	784
ENSMUSG00000104590	unprocessed_pseudogene	Gm5034	ENSMUST00000199115	unprocessed_pseudogene		12	-1	115884273	634
ENSMUSG00000022753	protein_coding	Tmem30c	ENSMUST00000120112	protein_coding		16	-1	57292851	3478
ENSMUSG00000029707	protein_coding	Fscn3	ENSMUST00000031719	protein_coding	principal1	6	1	28427789	1902
ENSMUSG00000069378	protein_coding	Prdm6	ENSMUST00000115399	processed_transcript		18	1	53472981	2227
ENSMUSG00000030805	protein_coding	Stx4a	ENSMUST00000138399	retained_intron		7	1	127841970	749
ENSMUSG00000022753	protein_coding	Tmem30c	ENSMUST00000023434	protein_coding	principal1	16	-1	57292851	2973
ENSMUSG00000015023	protein_coding	Ddx19a	ENSMUST00000040416	protein_coding	principal1	8	-1	110997800	2547
ENSMUSG00000002210	protein_coding	Smg9	ENSMUST00000148288	retained_intron		7	1	24414733	833
ENSMUSG00000075269	protein_coding	Bex6	ENSMUST00000099990	protein_coding	principal1	16	1	32186186	764
ENSMUSG00000069378	protein_coding	Prdm6	ENSMUST00000154557	processed_transcript		18	1	53535222	797
ENSMUSG00000105123	IG_V_pseudogene	Ighv1-79	ENSMUST00000200152	IG_V_pseudogene		12	-1	115888528	350
ENSMUSG00000100025	processed_pseudogene	Gm8141	ENSMUST00000190856	processed_pseudogene		1	1	109833024	1723
ENSMUSG00000105928	processed_pseudogene	Gm9256	ENSMUST00000198106	processed_pseudogene		12	1	115892884	1420
ENSMUSG00000002210	protein_coding	Smg9	ENSMUST00000123188	protein_coding		7	1	24414975	354
ENSMUSG00000015023	protein_coding	Ddx19a	ENSMUST00000130133	retained_intron		8	-1	110980634	754
ENSMUSG00000027243	protein_coding	Harbi1	ENSMUST00000090608	protein_coding	principal1	2	1	91710922	2308
ENSMUSG00000029707	protein_coding	Fscn3	ENSMUST00000147036	processed_transcript		6	1	28433964	403
ENSMUSG00000030805	protein_coding	Stx4a	ENSMUST00000156537	nonsense_mediated_decay		7	1	127841978	778
ENSMUSG00000094075	IG_V_gene	Ighv1-80	ENSMUST00000103547	IG_V_gene	principal1	12	-1	115912776	351
ENSMUSG00000069378	protein_coding	Prdm6	ENSMUST00000115398	processed_transcript		18	1	53551594	1474
ENSMUSG00000002210	protein_coding	Smg9	ENSMUST00000146686	retained_intron		7	1	24420195	1103
ENSMUSG00000030805	protein_coding	Stx4a	ENSMUST00000138294	retained_intron		7	1	127842685	501
ENSMUSG00000086290	lincRNA	Snhg12	ENSMUST00000144705	lincRNA		4	1	132308678	935
ENSMUSG00000086290	lincRNA	Snhg12	ENSMUST00000153474	lincRNA		4	1	132308678	606
ENSMUSG00000030805	protein_coding	Stx4a	ENSMUST00000142849	retained_intron		7	1	127843598	659
ENSMUSG00000027243	protein_coding	Harbi1	ENSMUST00000111322	protein_coding		2	1	91712195	1316
ENSMUSG00000086290	lincRNA	Snhg12	ENSMUST00000128000	lincRNA		4	1	132308896	422
ENSMUSG00000015023	protein_coding	Ddx19a	ENSMUST00000173183	retained_intron		8	-1	110997770	731
ENSMUSG00000030805	protein_coding	Stx4a	ENSMUST00000123180	retained_intron		7	1	127845784	742
ENSMUSG00000086290	lincRNA	Snhg12	ENSMUST00000128131	lincRNA		4	1	132309818	614
ENSMUSG00000094689	IG_V_gene	Ighv1-81	ENSMUST00000103548	IG_V_gene	principal1	12	-1	115920712	351
ENSMUSG00000027243	protein_coding	Harbi1	ENSMUST00000142692	protein_coding		2	1	91710917	3686
ENSMUSG00000030805	protein_coding	Stx4a	ENSMUST00000125861	retained_intron		7	1	127848391	546
ENSMUSG00000113926	processed_pseudogene	Gm3565	ENSMUST00000222670	processed_pseudogene		12	-1	111931037	609
ENSMUSG00000086290	lincRNA	Snhg12	ENSMUST00000182826	lincRNA		4	1	132310187	509
ENSMUSG00000108808	TEC	Gm45204	ENSMUST00000206297	TEC		7	-1	127813507	1354
ENSMUSG00000106434	IG_V_pseudogene	Gm42990	ENSMUST00000199231	IG_V_pseudogene		12	-1	115933491	312
ENSMUSG00000103918	IG_V_pseudogene	Ighv12-1	ENSMUST00000195542	IG_V_pseudogene		12	-1	114107587	329
ENSMUSG00000106041	unprocessed_pseudogene	Olfr241-ps1	ENSMUST00000197024	unprocessed_pseudogene		12	-1	115934904	633
ENSMUSG00000055128	protein_coding	Cgrrf1	ENSMUST00000068532	protein_coding	principal1	14	1	46832125	1324
ENSMUSG00000027243	protein_coding	Harbi1	ENSMUST00000140183	protein_coding		2	1	91710853	859
ENSMUSG00000094102	IG_V_gene	Ighv9-2	ENSMUST00000103472	IG_V_gene	principal1	12	-1	114109430	351
ENSMUSG00000085643	lincRNA	Gm12519	ENSMUST00000134099	lincRNA		4	-1	55993739	693
ENSMUSG00000113769	lincRNA	5033406O09Rik	ENSMUST00000221314	lincRNA		12	-1	111944484	1662
ENSMUSG00000036864	protein_coding	Proser3	ENSMUST00000215288	protein_coding	alternative2	7	-1	30552267	2465
ENSMUSG00000025732	protein_coding	Mcrip2	ENSMUST00000237876	processed_transcript		17	-1	25867836	775
ENSMUSG00000081290	processed_pseudogene	Gm12520	ENSMUST00000117493	processed_pseudogene		4	1	56162940	316
ENSMUSG00000095127	IG_V_gene	Ighv1-82	ENSMUST00000196991	IG_V_gene		12	-1	115953005	386
ENSMUSG00000036864	protein_coding	Proser3	ENSMUST00000108165	protein_coding	principal2	7	-1	30552272	2466
ENSMUSG00000027243	protein_coding	Harbi1	ENSMUST00000128140	protein_coding		2	1	91710852	372
ENSMUSG00000055128	protein_coding	Cgrrf1	ENSMUST00000140114	protein_coding		14	1	46832219	419
ENSMUSG00000102515	IG_V_pseudogene	Ighv12-2	ENSMUST00000191949	IG_V_pseudogene		12	-1	114127984	362
ENSMUSG00000090173	protein_coding	Fbxw10	ENSMUST00000036085	protein_coding	alternative2	11	1	62847069	3354
ENSMUSG00000055128	protein_coding	Cgrrf1	ENSMUST00000226861	nonsense_mediated_decay		14	1	46832219	1468
ENSMUSG00000113769	lincRNA	5033406O09Rik	ENSMUST00000221669	lincRNA		12	-1	111944475	1366
ENSMUSG00000054737	protein_coding	Zfp182	ENSMUST00000115333	protein_coding	principal2	X	-1	21062003	3130
ENSMUSG00000115524	processed_pseudogene	Gm49122	ENSMUST00000228560	processed_pseudogene		15	1	15875791	282
ENSMUSG00000085020	lincRNA	2310081O03Rik	ENSMUST00000128591	lincRNA		4	-1	56224521	759
ENSMUSG00000113769	lincRNA	5033406O09Rik	ENSMUST00000223453	lincRNA		12	-1	111944146	788
ENSMUSG00000115633	processed_pseudogene	Gm29753	ENSMUST00000226265	processed_pseudogene		15	1	15943431	485
ENSMUSG00000055128	protein_coding	Cgrrf1	ENSMUST00000133989	protein_coding		14	1	46832229	873
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000112024	protein_coding	principal1	2	-1	73775346	4050
ENSMUSG00000113769	lincRNA	5033406O09Rik	ENSMUST00000222845	lincRNA		12	-1	111944411	779
ENSMUSG00000028104	protein_coding	Polr3gl	ENSMUST00000091924	protein_coding	principal1	3	-1	96594181	1427
ENSMUSG00000115434	processed_pseudogene	Gm6479	ENSMUST00000227564	processed_pseudogene		15	-1	16207953	1027
ENSMUSG00000036864	protein_coding	Proser3	ENSMUST00000134113	retained_intron		7	-1	30552296	1888
ENSMUSG00000095127	IG_V_gene	Ighv1-82	ENSMUST00000103549	IG_V_gene	principal1	12	-1	115952831	294
ENSMUSG00000036864	protein_coding	Proser3	ENSMUST00000153594	protein_coding		7	-1	30552292	355
ENSMUSG00000090173	protein_coding	Fbxw10	ENSMUST00000177336	nonsense_mediated_decay		11	1	62847123	3230
ENSMUSG00000101046	processed_pseudogene	Gm28803	ENSMUST00000190385	processed_pseudogene		1	1	58702309	764
ENSMUSG00000026312	protein_coding	Cdh7	ENSMUST00000137092	protein_coding		1	1	109982431	2681
ENSMUSG00000036864	protein_coding	Proser3	ENSMUST00000208706	retained_intron		7	-1	30552299	1292
ENSMUSG00000055128	protein_coding	Cgrrf1	ENSMUST00000133790	retained_intron		14	1	46832244	2462
ENSMUSG00000090173	protein_coding	Fbxw10	ENSMUST00000175804	retained_intron		11	1	62847128	1412
ENSMUSG00000036864	protein_coding	Proser3	ENSMUST00000062708	protein_coding	principal2	7	-1	30549665	1905
ENSMUSG00000054737	protein_coding	Zfp182	ENSMUST00000115334	protein_coding	alternative2	X	-1	21062052	3160
ENSMUSG00000028104	protein_coding	Polr3gl	ENSMUST00000131641	retained_intron		3	-1	96581677	647
ENSMUSG00000113088	lincRNA	Gm36757	ENSMUST00000221818	lincRNA		12	1	111950517	3556
ENSMUSG00000090173	protein_coding	Fbxw10	ENSMUST00000176577	protein_coding	alternative2	11	1	62847132	3254
ENSMUSG00000028104	protein_coding	Polr3gl	ENSMUST00000141579	retained_intron		3	-1	96580155	545
ENSMUSG00000115417	sense_intronic	Gm48949	ENSMUST00000228424	sense_intronic		14	1	46844813	668
ENSMUSG00000105757	IG_V_pseudogene	Ighv1-83	ENSMUST00000199643	IG_V_pseudogene		12	-1	115964250	351
ENSMUSG00000090173	protein_coding	Fbxw10	ENSMUST00000127646	processed_transcript		11	1	62874859	461
ENSMUSG00000028104	protein_coding	Polr3gl	ENSMUST00000145001	protein_coding		3	-1	96594159	607
ENSMUSG00000090173	protein_coding	Fbxw10	ENSMUST00000150989	protein_coding	principal3	11	1	62847123	3267
ENSMUSG00000054737	protein_coding	Zfp182	ENSMUST00000040628	protein_coding	principal2	X	-1	21061986	2487
ENSMUSG00000117949	processed_pseudogene	Gm50180	ENSMUST00000236190	processed_pseudogene		18	1	80020179	253
ENSMUSG00000094940	IG_V_gene	Ighv1-84	ENSMUST00000103551	IG_V_gene	principal1	12	-1	115981134	351
ENSMUSG00000117857	processed_pseudogene	Gm50190	ENSMUST00000236485	processed_pseudogene		18	1	80022810	246
ENSMUSG00000117851	processed_pseudogene	Gm50192	ENSMUST00000237580	processed_pseudogene		18	1	80026093	246
ENSMUSG00000054737	protein_coding	Zfp182	ENSMUST00000133186	processed_transcript		X	-1	21062316	739
ENSMUSG00000117933	processed_pseudogene	Gm50193	ENSMUST00000237994	processed_pseudogene		18	1	80029356	246
ENSMUSG00000116860	processed_pseudogene	Gm46593	ENSMUST00000231491	processed_pseudogene		17	-1	8362445	339
ENSMUSG00000054737	protein_coding	Zfp182	ENSMUST00000138123	processed_transcript		X	-1	21062043	2417
ENSMUSG00000116704	processed_pseudogene	Gm5491	ENSMUST00000231828	processed_pseudogene		17	-1	8384660	608
ENSMUSG00000118269	TEC	Gm50195	ENSMUST00000235723	TEC		18	1	80086806	755
ENSMUSG00000111056	lincRNA	Gm39317	ENSMUST00000214720	lincRNA		9	1	32348682	549
ENSMUSG00000111056	lincRNA	Gm39317	ENSMUST00000213360	lincRNA		9	1	32349289	1138
ENSMUSG00000083420	processed_pseudogene	Gm15665	ENSMUST00000119116	processed_pseudogene		16	-1	37213764	847
ENSMUSG00000116854	processed_pseudogene	Gm49567	ENSMUST00000232416	processed_pseudogene		16	1	37352752	240
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000102677	protein_coding		2	-1	73660406	3760
ENSMUSG00000058159	protein_coding	T2	ENSMUST00000234809	protein_coding	principal5	17	1	8355992	2559
ENSMUSG00000056214	protein_coding	Pard6g	ENSMUST00000070219	protein_coding	principal1	18	1	80046890	3147
ENSMUSG00000025732	protein_coding	Mcrip2	ENSMUST00000235806	protein_coding		17	-1	25868734	738
ENSMUSG00000025732	protein_coding	Mcrip2	ENSMUST00000237080	nonsense_mediated_decay		17	-1	25868734	945
ENSMUSG00000056529	protein_coding	Ptafr	ENSMUST00000070690	protein_coding	principal1	4	1	132564067	3637
ENSMUSG00000029406	protein_coding	Pitpnm2	ENSMUST00000162812	protein_coding	principal3	5	-1	124249760	6952
ENSMUSG00000029406	protein_coding	Pitpnm2	ENSMUST00000161273	protein_coding	alternative2	5	-1	124249451	6792
ENSMUSG00000025732	protein_coding	Mcrip2	ENSMUST00000026828	protein_coding	principal1	17	-1	25868764	842
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000231013	processed_transcript		2	-1	73632563	1544
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000126626	protein_coding		1	-1	25228826	2953
ENSMUSG00000029406	protein_coding	Pitpnm2	ENSMUST00000161938	protein_coding	alternative2	5	-1	124187182	5866
ENSMUSG00000049387	protein_coding	Cox7b2	ENSMUST00000050129	protein_coding	principal1	5	-1	71548205	542
ENSMUSG00000025732	protein_coding	Mcrip2	ENSMUST00000237000	processed_transcript		17	-1	25864268	407
ENSMUSG00000045106	protein_coding	Ccdc73	ENSMUST00000111114	protein_coding	principal1	2	1	104886324	3944
ENSMUSG00000106239	processed_pseudogene	Gm9260	ENSMUST00000199781	processed_pseudogene		12	-1	115993370	1380
ENSMUSG00000029406	protein_coding	Pitpnm2	ENSMUST00000159628	retained_intron		5	-1	124124554	2755
ENSMUSG00000025732	protein_coding	Mcrip2	ENSMUST00000236479	protein_coding		17	-1	25868722	547
ENSMUSG00000058159	protein_coding	T2	ENSMUST00000169635	nonsense_mediated_decay		17	1	8396629	1080
ENSMUSG00000029406	protein_coding	Pitpnm2	ENSMUST00000161479	retained_intron		5	-1	124122100	869
ENSMUSG00000017466	protein_coding	Timp2	ENSMUST00000017610	protein_coding	principal1	11	-1	118355506	3709
ENSMUSG00000045106	protein_coding	Ccdc73	ENSMUST00000127840	protein_coding		2	1	104867805	602
ENSMUSG00000029406	protein_coding	Pitpnm2	ENSMUST00000159010	retained_intron		5	-1	124126632	525
ENSMUSG00000096150	IG_V_gene	Ighv1-85	ENSMUST00000103552	IG_V_gene	principal1	12	-1	116000461	351
ENSMUSG00000045106	protein_coding	Ccdc73	ENSMUST00000151764	protein_coding		2	1	104907546	1329
ENSMUSG00000025732	protein_coding	Mcrip2	ENSMUST00000235578	retained_intron		17	-1	25868737	659
ENSMUSG00000058159	protein_coding	T2	ENSMUST00000163578	protein_coding	alternative2	17	1	8372396	1755
ENSMUSG00000116969	processed_pseudogene	Gm19771	ENSMUST00000232350	processed_pseudogene		16	1	55739918	235
ENSMUSG00000045106	protein_coding	Ccdc73	ENSMUST00000144358	protein_coding		2	1	104992190	679
ENSMUSG00000017466	protein_coding	Timp2	ENSMUST00000155707	protein_coding		11	-1	118355740	718
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000168206	protein_coding		14	-1	31191530	4990
ENSMUSG00000045106	protein_coding	Ccdc73	ENSMUST00000130611	processed_transcript		2	1	105017121	318
ENSMUSG00000029406	protein_coding	Pitpnm2	ENSMUST00000159677	protein_coding		5	-1	124189747	1690
ENSMUSG00000105605	IG_V_pseudogene	Ighv1-86	ENSMUST00000200562	IG_V_pseudogene		12	-1	116010093	353
ENSMUSG00000020399	protein_coding	Havcr2	ENSMUST00000020668	protein_coding	principal1	11	1	46454935	2721
ENSMUSG00000117569	processed_transcript	Gm49987	ENSMUST00000140890	processed_transcript		17	1	8311109	693
ENSMUSG00000029406	protein_coding	Pitpnm2	ENSMUST00000161530	retained_intron		5	-1	124140261	4622
ENSMUSG00000055945	protein_coding	Prr18	ENSMUST00000232566	protein_coding		17	1	8337459	461
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000070579	protein_coding		2	-1	73625740	1023
ENSMUSG00000029406	protein_coding	Pitpnm2	ENSMUST00000161644	protein_coding		5	-1	124185118	404
ENSMUSG00000029406	protein_coding	Pitpnm2	ENSMUST00000086123	protein_coding	principal3	5	-1	124216418	6620
ENSMUSG00000076433	protein_coding	Cep295nl	ENSMUST00000103024	protein_coding	principal1	11	-1	118342500	1944
ENSMUSG00000055945	protein_coding	Prr18	ENSMUST00000069742	protein_coding	principal1	17	1	8340406	3408
ENSMUSG00000020814	protein_coding	Mxra7	ENSMUST00000021170	protein_coding	principal3	11	-1	116828046	2063
ENSMUSG00000020399	protein_coding	Havcr2	ENSMUST00000109229	protein_coding		11	1	46454969	2531
ENSMUSG00000076433	protein_coding	Cep295nl	ENSMUST00000168100	protein_coding	principal1	11	-1	118334016	1602
ENSMUSG00000026312	protein_coding	Cdh7	ENSMUST00000112701	protein_coding	principal1	1	1	109982710	4945
ENSMUSG00000112823	processed_pseudogene	Gm6125	ENSMUST00000217983	processed_pseudogene		12	-1	44622662	3472
ENSMUSG00000026312	protein_coding	Cdh7	ENSMUST00000129923	protein_coding		1	1	109982981	1409
ENSMUSG00000092183	antisense	4930515G01Rik	ENSMUST00000173208	antisense		5	-1	114774983	1247
ENSMUSG00000055945	protein_coding	Prr18	ENSMUST00000163887	protein_coding	principal1	17	1	8340739	3251
ENSMUSG00000079342	protein_coding	Lipo1	ENSMUST00000148137	protein_coding	principal1	19	-1	33787459	2243
ENSMUSG00000090220	antisense	Pitpnm2os1	ENSMUST00000161697	antisense		5	1	124229725	1618
ENSMUSG00000020814	protein_coding	Mxra7	ENSMUST00000047715	protein_coding	alternative2	11	-1	116828013	757
ENSMUSG00000026312	protein_coding	Cdh7	ENSMUST00000145188	protein_coding		1	1	109983006	714
ENSMUSG00000105759	antisense	Gm42425	ENSMUST00000197756	antisense		5	1	124237724	565
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000229731	protein_coding		2	-1	73625669	1403
ENSMUSG00000107907	processed_pseudogene	Gm8574	ENSMUST00000203207	processed_pseudogene		6	-1	67385341	924
ENSMUSG00000020814	protein_coding	Mxra7	ENSMUST00000150015	nonsense_mediated_decay		11	-1	116828003	571
ENSMUSG00000024409	protein_coding	Psors1c2	ENSMUST00000025273	protein_coding	principal1	17	1	35533201	843
ENSMUSG00000097313	processed_transcript	Gm26569	ENSMUST00000181968	lincRNA		16	-1	29946517	1789
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000166199	protein_coding		2	-1	73775043	1324
ENSMUSG00000108000	processed_pseudogene	Gm44208	ENSMUST00000205199	processed_pseudogene		6	-1	67406906	421
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000026699	protein_coding	principal1	6	1	31398735	11395
ENSMUSG00000097313	processed_transcript	Gm26569	ENSMUST00000232297	lincRNA		16	-1	29946516	699
ENSMUSG00000097313	processed_transcript	Gm26569	ENSMUST00000232356	retained_intron		16	-1	29946754	2375
ENSMUSG00000037603	processed_pseudogene	Gm5519	ENSMUST00000042061	processed_pseudogene		19	1	33822908	507
ENSMUSG00000041248	protein_coding	Kcnj1	ENSMUST00000047334	protein_coding	principal1	9	1	32372493	2987
ENSMUSG00000053297	protein_coding	AI854703	ENSMUST00000095938	protein_coding	principal1	6	1	48626764	3517
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000124450	nonsense_mediated_decay		2	-1	73716409	643
ENSMUSG00000026312	protein_coding	Cdh7	ENSMUST00000131464	nonsense_mediated_decay		1	1	109983229	4211
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000018744	protein_coding	principal1	11	-1	60811265	2858
ENSMUSG00000075286	lincRNA	Gm1968	ENSMUST00000231469	lincRNA		16	-1	29979184	1042
ENSMUSG00000075286	lincRNA	Gm1968	ENSMUST00000100016	lincRNA		16	-1	29962307	348
ENSMUSG00000041248	protein_coding	Kcnj1	ENSMUST00000213393	protein_coding	principal1	9	1	32385209	1277
ENSMUSG00000053297	protein_coding	AI854703	ENSMUST00000203088	protein_coding		6	1	48627223	486
ENSMUSG00000053297	protein_coding	AI854703	ENSMUST00000204958	protein_coding		6	1	48627281	376
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000119661	protein_coding	principal1	7	1	4119530	2512
ENSMUSG00000053297	protein_coding	AI854703	ENSMUST00000154570	protein_coding	principal1	6	1	48627935	3806
ENSMUSG00000026312	protein_coding	Cdh7	ENSMUST00000146282	protein_coding		1	1	109983281	4776
ENSMUSG00000041248	protein_coding	Kcnj1	ENSMUST00000172015	protein_coding		9	1	32393985	3075
ENSMUSG00000026312	protein_coding	Cdh7	ENSMUST00000134301	protein_coding		1	1	110099295	677
ENSMUSG00000082613	processed_pseudogene	Gm12518	ENSMUST00000122075	processed_pseudogene		4	1	56387802	779
ENSMUSG00000060438	processed_pseudogene	Rps10-ps1	ENSMUST00000074353	processed_pseudogene		3	1	95622278	495
ENSMUSG00000024381	protein_coding	Bin1	ENSMUST00000234857	protein_coding		18	1	32377230	1530
ENSMUSG00000026312	protein_coding	Cdh7	ENSMUST00000027542	protein_coding	principal1	1	1	109993982	3390
ENSMUSG00000043621	protein_coding	Ubxn10	ENSMUST00000146415	nonsense_mediated_decay		4	-1	138725221	2460
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000115358	protein_coding	alternative2	6	-1	23839420	4848
ENSMUSG00000024381	protein_coding	Bin1	ENSMUST00000234496	protein_coding	alternative1	18	1	32377245	1886
ENSMUSG00000026312	protein_coding	Cdh7	ENSMUST00000172005	protein_coding	principal1	1	1	109983737	3353
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000129423	protein_coding	principal1	7	1	4119533	4355
ENSMUSG00000027793	protein_coding	Ccna1	ENSMUST00000198102	protein_coding		3	-1	55050638	876
ENSMUSG00000073468	protein_coding	Sft2d1	ENSMUST00000154553	protein_coding	principal1	17	1	8311102	1049
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000148760	processed_transcript		7	1	4119556	609
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000229987	retained_intron		2	-1	73775067	1431
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000154258	protein_coding		2	-1	73660376	712
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000136953	protein_coding		2	-1	73655058	413
ENSMUSG00000043621	protein_coding	Ubxn10	ENSMUST00000105811	protein_coding	principal1	4	-1	138725265	2926
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000139252	nonsense_mediated_decay		2	-1	73775326	881
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000229312	processed_transcript		2	-1	73679625	20
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000135904	protein_coding		2	-1	73768853	631
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000230959	processed_transcript		2	-1	73722094	205
ENSMUSG00000024381	protein_coding	Bin1	ENSMUST00000091967	protein_coding	principal2	18	1	32377245	2091
ENSMUSG00000043621	protein_coding	Ubxn10	ENSMUST00000105810	protein_coding	principal1	4	-1	138737167	3304
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000174093	processed_transcript		11	-1	60799403	1295
ENSMUSG00000056486	protein_coding	Chn1	ENSMUST00000180045	protein_coding		2	-1	73775346	4050
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000174719	protein_coding		11	-1	60807021	1318
ENSMUSG00000043621	protein_coding	Ubxn10	ENSMUST00000105809	protein_coding	principal1	4	-1	138724856	2757
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000174174	nonsense_mediated_decay		11	-1	60807021	1319
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000174214	protein_coding		11	-1	60807021	1324
ENSMUSG00000043621	protein_coding	Ubxn10	ENSMUST00000135156	processed_transcript		4	-1	138737136	566
ENSMUSG00000034923	protein_coding	Ly6g6f	ENSMUST00000038507	protein_coding	principal1	17	-1	35085610	1141
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000172804	retained_intron		11	-1	60794997	582
ENSMUSG00000086544	antisense	Chn1os3	ENSMUST00000147420	antisense		2	1	73596526	2707
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000135081	retained_intron		11	-1	60793173	453
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000124227	retained_intron		11	-1	60797853	569
ENSMUSG00000086544	antisense	Chn1os3	ENSMUST00000149231	antisense		2	1	73596824	538
ENSMUSG00000085838	antisense	Chn1os1	ENSMUST00000123613	antisense		2	1	73658270	636
ENSMUSG00000039620	protein_coding	Trmt9b	ENSMUST00000135373	protein_coding		8	1	36457548	2573
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000018122	protein_coding	principal3	6	-1	23839225	4723
ENSMUSG00000038619	protein_coding	Ensa	ENSMUST00000199421	TEC		3	1	95624993	998
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000079415	protein_coding		7	1	4119585	2882
ENSMUSG00000034994	protein_coding	Eef2	ENSMUST00000047864	protein_coding	principal1	10	1	81176631	3089
ENSMUSG00000039620	protein_coding	Trmt9b	ENSMUST00000147525	protein_coding	principal1	8	1	36457574	5820
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000173260	retained_intron		11	-1	60811091	1283
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000142913	protein_coding		6	-1	23839137	4533
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000173698	processed_transcript		11	-1	60802670	415
ENSMUSG00000034994	protein_coding	Eef2	ENSMUST00000219943	retained_intron		10	1	81180035	519
ENSMUSG00000024381	protein_coding	Bin1	ENSMUST00000025239	protein_coding		18	1	32377257	2406
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000115361	protein_coding		6	-1	23839224	4571
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000206987	nonsense_mediated_decay		7	1	4119588	582
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000211301	nonsense_mediated_decay		9	1	121297502	4052
ENSMUSG00000039620	protein_coding	Trmt9b	ENSMUST00000152039	nonsense_mediated_decay		8	1	36458182	889
ENSMUSG00000034994	protein_coding	Eef2	ENSMUST00000219497	retained_intron		10	1	81181051	651
ENSMUSG00000039620	protein_coding	Trmt9b	ENSMUST00000125492	processed_transcript		8	1	36505489	1258
ENSMUSG00000020534	protein_coding	Shmt1	ENSMUST00000172659	processed_transcript		11	-1	60811718	565
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000153673	nonsense_mediated_decay		7	1	4119622	655
ENSMUSG00000024381	protein_coding	Bin1	ENSMUST00000234024	protein_coding		18	1	32407634	539
ENSMUSG00000073468	protein_coding	Sft2d1	ENSMUST00000150728	retained_intron		17	1	8311102	2490
ENSMUSG00000039335	protein_coding	Spata16	ENSMUST00000047005	protein_coding	principal3	3	1	26637620	2022
ENSMUSG00000034723	protein_coding	Tmx4	ENSMUST00000038228	protein_coding	principal2	2	-1	134644145	5488
ENSMUSG00000049323	protein_coding	Smcr8	ENSMUST00000102667	protein_coding		11	1	60777524	3544
ENSMUSG00000039620	protein_coding	Trmt9b	ENSMUST00000171777	protein_coding	principal1	8	1	36489191	1825
ENSMUSG00000024381	protein_coding	Bin1	ENSMUST00000234373	retained_intron		18	1	32428034	2682
ENSMUSG00000031828	protein_coding	Klhl36	ENSMUST00000212636	retained_intron		8	1	119862266	1354
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000211699	retained_intron		9	1	121297512	2149
ENSMUSG00000085934	unprocessed_pseudogene	Gm8988	ENSMUST00000155015	unprocessed_pseudogene		19	-1	33842598	1240
ENSMUSG00000031828	protein_coding	Klhl36	ENSMUST00000212970	processed_transcript		8	1	119862269	480
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000156986	processed_transcript		6	-1	23355919	1931
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000032594	nonsense_mediated_decay		7	1	4119754	2713
ENSMUSG00000034723	protein_coding	Tmx4	ENSMUST00000137377	processed_transcript		2	-1	134644132	3917
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000151959	processed_transcript		7	1	4120220	408
ENSMUSG00000049323	protein_coding	Smcr8	ENSMUST00000056907	protein_coding	principal1	11	1	60777525	7391
ENSMUSG00000027793	protein_coding	Ccna1	ENSMUST00000029368	protein_coding	principal1	3	-1	55055055	1560
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000125350	protein_coding		6	-1	23587424	2735
ENSMUSG00000039335	protein_coding	Spata16	ENSMUST00000108305	protein_coding	alternative2	3	1	26637650	1789
ENSMUSG00000034723	protein_coding	Tmx4	ENSMUST00000110120	protein_coding	alternative2	2	-1	134644041	2602
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000069074	protein_coding		6	-1	23839143	3935
ENSMUSG00000096086	processed_pseudogene	Gm4761	ENSMUST00000178086	processed_pseudogene		6	-1	67415012	582
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000146592	protein_coding		1	-1	25826139	4467
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000134536	retained_intron		7	1	4122149	2649
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000152131	processed_transcript		6	-1	23314169	744
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000206869	protein_coding		7	1	4124489	1491
ENSMUSG00000034723	protein_coding	Tmx4	ENSMUST00000110119	protein_coding		2	-1	134644090	596
ENSMUSG00000117821	unprocessed_pseudogene	Gm50120	ENSMUST00000235208	unprocessed_pseudogene		19	-1	33872207	1129
ENSMUSG00000024867	protein_coding	Pip5k1b	ENSMUST00000025800	protein_coding	principal1	19	-1	24555872	2573
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000115356	protein_coding		6	-1	23839263	3533
ENSMUSG00000028750	protein_coding	Pla2g2c	ENSMUST00000105808	protein_coding	principal1	4	1	138724792	3448
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000205971	processed_transcript		7	1	4125667	740
ENSMUSG00000107508	processed_pseudogene	Gm44083	ENSMUST00000203114	processed_pseudogene		6	-1	67418051	337
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000132400	retained_intron		7	1	4128226	575
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000135518	protein_coding	principal1	1	-1	25829511	5432
ENSMUSG00000024867	protein_coding	Pip5k1b	ENSMUST00000112673	protein_coding		19	-1	24555842	2387
ENSMUSG00000027793	protein_coding	Ccna1	ENSMUST00000198320	protein_coding	principal1	3	-1	55055042	1564
ENSMUSG00000028750	protein_coding	Pla2g2c	ENSMUST00000124660	protein_coding		4	1	138725325	737
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000136279	retained_intron		6	-1	23839300	3031
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000148951	retained_intron		7	1	4129246	569
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000128317	retained_intron		7	1	4130619	711
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000151309	protein_coding	principal1	1	-1	25829707	5448
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000115355	retained_intron		6	-1	23839262	2118
ENSMUSG00000039518	protein_coding	Cdsn	ENSMUST00000044804	protein_coding	principal1	17	1	35552128	2678
ENSMUSG00000038619	protein_coding	Ensa	ENSMUST00000058230	protein_coding	alternative1	3	1	95625011	1130
ENSMUSG00000027793	protein_coding	Ccna1	ENSMUST00000197238	protein_coding	principal1	3	-1	55055501	1719
ENSMUSG00000073468	protein_coding	Sft2d1	ENSMUST00000130782	nonsense_mediated_decay		17	1	8311122	777
ENSMUSG00000028750	protein_coding	Pla2g2c	ENSMUST00000030530	protein_coding	principal1	4	1	138725325	1618
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000139789	retained_intron		7	1	4131137	773
ENSMUSG00000024867	protein_coding	Pip5k1b	ENSMUST00000156814	retained_intron		19	-1	24555838	1216
ENSMUSG00000030428	protein_coding	Ttyh1	ENSMUST00000140637	retained_intron		7	1	4133030	417
ENSMUSG00000024867	protein_coding	Pip5k1b	ENSMUST00000145829	processed_transcript		19	-1	24555789	464
ENSMUSG00000035764	protein_coding	Fbxo45	ENSMUST00000042732	protein_coding	principal1	16	-1	32247158	4179
ENSMUSG00000027793	protein_coding	Ccna1	ENSMUST00000199144	protein_coding		3	-1	55055482	749
ENSMUSG00000097184	lincRNA	4632428C04Rik	ENSMUST00000181485	lincRNA		16	1	30008667	2428
ENSMUSG00000024867	protein_coding	Pip5k1b	ENSMUST00000134360	processed_transcript		19	-1	24317342	597
ENSMUSG00000027793	protein_coding	Ccna1	ENSMUST00000199352	protein_coding		3	-1	55055037	391
ENSMUSG00000105977	processed_pseudogene	Gm43555	ENSMUST00000196588	processed_pseudogene		3	-1	55057656	310
ENSMUSG00000085003	antisense	Pip5k1bos	ENSMUST00000126936	antisense		19	1	24416009	684
ENSMUSG00000038619	protein_coding	Ensa	ENSMUST00000037983	protein_coding	principal3	3	1	95625020	3845
ENSMUSG00000105935	TEC	Gm43628	ENSMUST00000197871	TEC		5	-1	65308994	1187
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000166458	protein_coding		6	-1	23839137	4598
ENSMUSG00000031828	protein_coding	Klhl36	ENSMUST00000034287	protein_coding	principal1	8	1	119862272	2181
ENSMUSG00000109799	antisense	Gm45515	ENSMUST00000210796	antisense		7	-1	110281527	2141
ENSMUSG00000038619	protein_coding	Ensa	ENSMUST00000197050	retained_intron		3	1	95625026	937
ENSMUSG00000106589	antisense	4931419H13Rik	ENSMUST00000199770	antisense		3	1	55055242	973
ENSMUSG00000086155	antisense	9430041J12Rik	ENSMUST00000154825	antisense		7	-1	4120728	2312
ENSMUSG00000106383	TEC	E330034L11Rik	ENSMUST00000200640	TEC		3	1	95639304	1742
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000153568	retained_intron		1	-1	25229100	2646
ENSMUSG00000086155	antisense	9430041J12Rik	ENSMUST00000132560	antisense		7	-1	4120444	1266
ENSMUSG00000086155	antisense	9430041J12Rik	ENSMUST00000149343	antisense		7	-1	4120444	2122
ENSMUSG00000073468	protein_coding	Sft2d1	ENSMUST00000135627	processed_transcript		17	1	8311139	600
ENSMUSG00000086155	antisense	9430041J12Rik	ENSMUST00000050989	pseudogene		7	-1	4120444	534
ENSMUSG00000096459	IG_V_gene	Ighv9-3	ENSMUST00000103473	IG_V_gene	principal1	12	-1	114141122	351
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000126096	retained_intron		1	-1	25229046	4569
ENSMUSG00000017978	protein_coding	Cadps2	ENSMUST00000163871	protein_coding	alternative1	6	-1	23839421	4969
ENSMUSG00000101291	lincRNA	Gm29194	ENSMUST00000189250	lincRNA		Y	1	5934890	2167
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000154102	processed_transcript		1	-1	25204723	343
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000190202	retained_intron		1	-1	25205696	2254
ENSMUSG00000073468	protein_coding	Sft2d1	ENSMUST00000145276	nonsense_mediated_decay		17	1	8311169	810
ENSMUSG00000072553	protein_coding	Gm525	ENSMUST00000100619	protein_coding	principal1	11	1	89073841	557
ENSMUSG00000096036	protein_coding	Gm21778	ENSMUST00000185926	protein_coding	principal1	Y	1	5942460	1482
ENSMUSG00000073468	protein_coding	Sft2d1	ENSMUST00000141213	retained_intron		17	1	8311175	470
ENSMUSG00000096036	protein_coding	Gm21778	ENSMUST00000178779	protein_coding		Y	1	5944438	471
ENSMUSG00000037167	protein_coding	Spaca5	ENSMUST00000040437	protein_coding	principal1	X	1	21068406	640
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000134022	retained_intron		1	-1	25228827	4232
ENSMUSG00000073468	protein_coding	Sft2d1	ENSMUST00000153406	retained_intron		17	1	8318729	492
ENSMUSG00000073468	protein_coding	Sft2d1	ENSMUST00000135964	retained_intron		17	1	8320548	367
ENSMUSG00000072553	protein_coding	Gm525	ENSMUST00000127186	protein_coding		11	1	89075009	503
ENSMUSG00000051956	protein_coding	Rnf133	ENSMUST00000063548	protein_coding		6	-1	23650305	1308
ENSMUSG00000073468	protein_coding	Sft2d1	ENSMUST00000128087	retained_intron		17	1	8324386	564
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000134315	retained_intron		6	1	31398828	3635
ENSMUSG00000032177	protein_coding	Pde4a	ENSMUST00000039413	protein_coding	principal3	9	1	21165714	4653
ENSMUSG00000051956	protein_coding	Rnf133	ENSMUST00000115354	protein_coding	principal1	6	-1	23650206	1333
ENSMUSG00000116660	lincRNA	9030404E10Rik	ENSMUST00000232465	lincRNA		16	-1	30039479	1209
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000228460	processed_transcript		15	1	39198261	1381
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000137621	retained_intron		6	1	31398829	3617
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000189254	retained_intron		1	-1	25826347	5530
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000133182	retained_intron		6	1	31398836	625
ENSMUSG00000086919	lincRNA	Gm11497	ENSMUST00000138295	lincRNA		11	-1	89126706	2154
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000202577	retained_intron		6	1	31398845	5628
ENSMUSG00000033569	protein_coding	Adgrb3	ENSMUST00000041838	protein_coding	principal1	1	-1	25826760	5059
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000134544	retained_intron		6	1	31398845	3054
ENSMUSG00000078179	protein_coding	Rnf148	ENSMUST00000104979	protein_coding	principal1	6	-1	23655136	1239
ENSMUSG00000041798	protein_coding	Gck	ENSMUST00000109823	protein_coding		11	-1	5915124	2361
ENSMUSG00000053603	TEC	4930442H23Rik	ENSMUST00000056086	TEC		10	-1	81183849	1245
ENSMUSG00000032177	protein_coding	Pde4a	ENSMUST00000131769	retained_intron		9	1	21181616	3594
ENSMUSG00000102250	TEC	Gm38260	ENSMUST00000193573	TEC		1	-1	25676239	3995
ENSMUSG00000101530	unprocessed_pseudogene	Gm29259	ENSMUST00000186396	unprocessed_pseudogene		Y	-1	64561527	694
ENSMUSG00000025854	protein_coding	Fam20c	ENSMUST00000026972	protein_coding	principal1	5	1	138754514	3582
ENSMUSG00000041798	protein_coding	Gck	ENSMUST00000109822	protein_coding		11	-1	5915124	1786
ENSMUSG00000032177	protein_coding	Pde4a	ENSMUST00000140440	retained_intron		9	1	21184101	2623
ENSMUSG00000048728	protein_coding	Zfp454	ENSMUST00000050595	protein_coding	principal1	11	-1	50887443	2059
ENSMUSG00000100676	transcribed_unprocessed_pseudogene	Gm28860	ENSMUST00000188103	transcribed_unprocessed_pseudogene		Y	-1	64598172	313
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000154954	processed_transcript		6	1	31398859	704
ENSMUSG00000093766	unprocessed_pseudogene	Gm20679	ENSMUST00000177285	unprocessed_pseudogene		7	-1	10205677	1402
ENSMUSG00000027170	protein_coding	Eif3m	ENSMUST00000028592	protein_coding	principal1	2	-1	105017080	1283
ENSMUSG00000031015	protein_coding	Swap70	ENSMUST00000033325	protein_coding	principal1	7	1	110221711	4027
ENSMUSG00000042976	lincRNA	9930038B18Rik	ENSMUST00000151816	lincRNA		12	-1	8893473	3966
ENSMUSG00000041798	protein_coding	Gck	ENSMUST00000102920	protein_coding	principal1	11	-1	5950081	2727
ENSMUSG00000031015	protein_coding	Swap70	ENSMUST00000209261	retained_intron		7	1	110221731	2975
ENSMUSG00000048728	protein_coding	Zfp454	ENSMUST00000109131	protein_coding		11	-1	50887651	1957
ENSMUSG00000042976	lincRNA	9930038B18Rik	ENSMUST00000218928	lincRNA		12	-1	8877382	3126
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000238988	protein_coding	alternative2	9	1	121297512	3353
ENSMUSG00000048728	protein_coding	Zfp454	ENSMUST00000126718	processed_transcript		11	-1	50887651	579
ENSMUSG00000048728	protein_coding	Zfp454	ENSMUST00000125749	protein_coding		11	-1	50887651	722
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000210798	protein_coding	alternative2	9	1	121297512	5363
ENSMUSG00000032177	protein_coding	Pde4a	ENSMUST00000115458	protein_coding	alternative2	9	1	21184103	2962
ENSMUSG00000021846	protein_coding	Peli2	ENSMUST00000073150	protein_coding	principal1	14	1	48120823	5900
ENSMUSG00000041798	protein_coding	Gck	ENSMUST00000125434	protein_coding		11	-1	5902087	394
ENSMUSG00000027170	protein_coding	Eif3m	ENSMUST00000131266	retained_intron		2	-1	105007271	1964
ENSMUSG00000031015	protein_coding	Swap70	ENSMUST00000210743	retained_intron		7	1	110221732	1163
ENSMUSG00000048728	protein_coding	Zfp454	ENSMUST00000136599	processed_transcript		11	-1	50887530	606
ENSMUSG00000031015	protein_coding	Swap70	ENSMUST00000210513	retained_intron		7	1	110221755	1670
ENSMUSG00000048728	protein_coding	Zfp454	ENSMUST00000163301	protein_coding	principal1	11	-1	50887501	2090
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000211439	protein_coding	alternative2	9	1	121297534	3533
ENSMUSG00000027170	protein_coding	Eif3m	ENSMUST00000148476	protein_coding		2	-1	105006823	494
ENSMUSG00000027170	protein_coding	Eif3m	ENSMUST00000111110	protein_coding		2	-1	105017043	817
ENSMUSG00000038612	protein_coding	Mcl1	ENSMUST00000037947	protein_coding	principal2	3	1	95658788	3418
ENSMUSG00000032177	protein_coding	Pde4a	ENSMUST00000003395	protein_coding		9	1	21196705	2524
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000150949	processed_transcript		6	1	31430682	1312
ENSMUSG00000084819	antisense	Gm11967	ENSMUST00000135132	antisense		11	1	5915315	480
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000209390	processed_transcript		9	1	121297829	351
ENSMUSG00000100308	unprocessed_pseudogene	Gm29410	ENSMUST00000188383	unprocessed_pseudogene		Y	1	68951290	694
ENSMUSG00000117979	lincRNA	Gm50341	ENSMUST00000235982	lincRNA		19	1	24556352	254
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000147614	processed_transcript		6	1	31430716	930
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000211149	processed_transcript		9	1	121314238	510
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000031410	protein_coding	principal2	5	-1	121545905	2234
ENSMUSG00000114494	processed_pseudogene	Gm48663	ENSMUST00000224615	processed_pseudogene		14	-1	36232041	601
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000210636	protein_coding		9	1	121366968	2197
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000141045	retained_intron		6	1	31468120	888
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000200915	retained_intron		6	1	31476863	3612
ENSMUSG00000114779	processed_pseudogene	Gm17940	ENSMUST00000225675	processed_pseudogene		14	1	36619278	810
ENSMUSG00000037905	protein_coding	Bri3bp	ENSMUST00000049040	protein_coding	principal1	5	1	125441568	6473
ENSMUSG00000038612	protein_coding	Mcl1	ENSMUST00000178686	protein_coding	alternative2	3	1	95658857	858
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000130108	protein_coding		6	1	31489394	791
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000209211	nonsense_mediated_decay		9	1	121367015	462
ENSMUSG00000021846	protein_coding	Peli2	ENSMUST00000226828	nonsense_mediated_decay		14	1	48120869	3527
ENSMUSG00000037905	protein_coding	Bri3bp	ENSMUST00000198811	protein_coding		5	1	125441750	745
ENSMUSG00000025609	protein_coding	Mkln1	ENSMUST00000149859	retained_intron		6	1	31492621	545
ENSMUSG00000115614	lincRNA	Gm41276	ENSMUST00000227529	lincRNA		15	-1	16496812	400
ENSMUSG00000038538	protein_coding	Ubn2	ENSMUST00000160583	protein_coding	principal2	6	1	38433950	14644
ENSMUSG00000025854	protein_coding	Fam20c	ENSMUST00000160645	nonsense_mediated_decay		5	1	138755083	2395
ENSMUSG00000115485	lincRNA	Gm49126	ENSMUST00000227245	lincRNA		15	1	16496911	721
ENSMUSG00000117934	unprocessed_pseudogene	Gm50342	ENSMUST00000235519	unprocessed_pseudogene		19	1	24856196	262
ENSMUSG00000021846	protein_coding	Peli2	ENSMUST00000226513	protein_coding		14	1	48120922	1320
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000045903	protein_coding	principal2	9	1	121367016	4827
ENSMUSG00000086855	lincRNA	Gm13844	ENSMUST00000134541	lincRNA		6	1	31372895	581
ENSMUSG00000025854	protein_coding	Fam20c	ENSMUST00000197027	retained_intron		5	1	138755087	3763
ENSMUSG00000097950	processed_pseudogene	Gm17800	ENSMUST00000182466	processed_pseudogene		19	-1	24693370	971
ENSMUSG00000115670	processed_pseudogene	Gm2611	ENSMUST00000228469	processed_pseudogene		15	-1	16600562	605
ENSMUSG00000020183	protein_coding	Cpm	ENSMUST00000138020	processed_transcript		10	1	117629500	798
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000111783	protein_coding	alternative1	5	-1	121545200	1513
ENSMUSG00000025854	protein_coding	Fam20c	ENSMUST00000159176	processed_transcript		5	1	138786500	795
ENSMUSG00000104793	TEC	Gm43756	ENSMUST00000199788	TEC		5	1	125471497	2838
ENSMUSG00000021846	protein_coding	Peli2	ENSMUST00000228456	processed_transcript		14	1	48120937	587
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000209995	protein_coding		9	1	121382794	434
ENSMUSG00000079283	protein_coding	2310009B15Rik	ENSMUST00000112025	protein_coding	principal1	1	-1	138856852	565
ENSMUSG00000021846	protein_coding	Peli2	ENSMUST00000226260	processed_transcript		14	1	48122029	363
ENSMUSG00000021846	protein_coding	Peli2	ENSMUST00000227362	protein_coding		14	1	48168273	779
ENSMUSG00000025854	protein_coding	Fam20c	ENSMUST00000160988	processed_transcript		5	1	138788774	880
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000128782	retained_intron		5	-1	121525832	358
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000209306	processed_transcript		9	1	121391961	651
ENSMUSG00000038538	protein_coding	Ubn2	ENSMUST00000039127	protein_coding	alternative2	6	1	38434173	4243
ENSMUSG00000025854	protein_coding	Fam20c	ENSMUST00000161641	retained_intron		5	1	138807190	611
ENSMUSG00000021846	protein_coding	Peli2	ENSMUST00000228519	processed_transcript		14	1	48185006	1629
ENSMUSG00000048572	protein_coding	Tmem252	ENSMUST00000057243	protein_coding	principal1	19	1	24674008	5034
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000152270	protein_coding		5	-1	121527186	436
ENSMUSG00000020183	protein_coding	Cpm	ENSMUST00000123374	retained_intron		10	1	117629500	573
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000210351	protein_coding		9	1	121403478	918
ENSMUSG00000038538	protein_coding	Ubn2	ENSMUST00000162593	protein_coding		6	1	38440533	5752
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000054598	protein_coding	principal3	5	1	35757880	3564
ENSMUSG00000079283	protein_coding	2310009B15Rik	ENSMUST00000195075	retained_intron		1	-1	138854350	970
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000211187	protein_coding	alternative2	9	1	121415975	4043
ENSMUSG00000038538	protein_coding	Ubn2	ENSMUST00000162026	retained_intron		6	1	38462803	293
ENSMUSG00000021846	protein_coding	Peli2	ENSMUST00000081029	processed_transcript		14	1	48198716	1599
ENSMUSG00000032536	protein_coding	Trak1	ENSMUST00000209446	protein_coding		9	1	121454296	736
ENSMUSG00000048799	protein_coding	Cep120	ENSMUST00000049811	protein_coding	principal1	18	-1	53744547	4554
ENSMUSG00000115790	TEC	9530086P17Rik	ENSMUST00000228011	TEC		14	-1	48130163	679
ENSMUSG00000034429	protein_coding	Zfp707	ENSMUST00000109966	protein_coding	principal1	15	1	75969123	1803
ENSMUSG00000110751	TEC	C230053D17Rik	ENSMUST00000214451	TEC		9	1	121319385	2246
ENSMUSG00000022656	protein_coding	Nectin3	ENSMUST00000023335	protein_coding	alternative1	16	-1	46496967	9116
ENSMUSG00000115686	TEC	Gm49310	ENSMUST00000228432	TEC		14	1	48134224	3023
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000105968	protein_coding	alternative2	7	1	142460809	1727
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000131291	processed_transcript		5	1	108065674	2355
ENSMUSG00000038538	protein_coding	Ubn2	ENSMUST00000161280	retained_intron		6	1	38463741	1661
ENSMUSG00000063885	transcribed_processed_pseudogene	Gm6498	ENSMUST00000181413	transcribed_processed_pseudogene		14	1	48227201	1006
ENSMUSG00000110738	TEC	Gm47092	ENSMUST00000214815	TEC		9	1	121346556	1813
ENSMUSG00000079283	protein_coding	2310009B15Rik	ENSMUST00000193374	nonsense_mediated_decay		1	-1	138856847	1017
ENSMUSG00000048799	protein_coding	Cep120	ENSMUST00000237062	protein_coding		18	-1	53744608	3261
ENSMUSG00000034429	protein_coding	Zfp707	ENSMUST00000131496	retained_intron		15	1	75969158	2701
ENSMUSG00000115555	TEC	Gm49307	ENSMUST00000227419	TEC		14	1	48196760	1271
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000126524	retained_intron		5	-1	121527253	578
ENSMUSG00000038538	protein_coding	Ubn2	ENSMUST00000162423	retained_intron		6	1	38483147	520
ENSMUSG00000086212	lincRNA	Mkln1os	ENSMUST00000144232	lincRNA		6	-1	31398773	964
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000124195	nonsense_mediated_decay		5	1	108065711	2549
ENSMUSG00000038538	protein_coding	Ubn2	ENSMUST00000159215	processed_transcript		6	1	38483245	729
ENSMUSG00000116789	antisense	Gm49579	ENSMUST00000232099	antisense		16	1	57338310	1103
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000114205	protein_coding	alternative2	5	1	35757924	2579
ENSMUSG00000022656	protein_coding	Nectin3	ENSMUST00000121803	protein_coding		16	-1	46411169	541
ENSMUSG00000086212	lincRNA	Mkln1os	ENSMUST00000154820	lincRNA		6	-1	31398753	594
ENSMUSG00000092409	processed_pseudogene	Gm9613	ENSMUST00000171662	processed_pseudogene		17	-1	35562118	196
ENSMUSG00000038538	protein_coding	Ubn2	ENSMUST00000159925	retained_intron		6	1	38484093	5521
ENSMUSG00000022656	protein_coding	Nectin3	ENSMUST00000119941	protein_coding		16	-1	46411225	529
ENSMUSG00000034429	protein_coding	Zfp707	ENSMUST00000109967	protein_coding		15	1	75969179	1703
ENSMUSG00000022656	protein_coding	Nectin3	ENSMUST00000121245	protein_coding		16	-1	46448510	953
ENSMUSG00000086212	lincRNA	Mkln1os	ENSMUST00000139185	lincRNA		6	-1	31398759	1864
ENSMUSG00000022656	protein_coding	Nectin3	ENSMUST00000124602	protein_coding		16	-1	46438055	911
ENSMUSG00000086931	lincRNA	Gm14532	ENSMUST00000156115	lincRNA		6	1	31356743	279
ENSMUSG00000038538	protein_coding	Ubn2	ENSMUST00000159447	protein_coding		6	1	38491004	3453
ENSMUSG00000048799	protein_coding	Cep120	ENSMUST00000237145	retained_intron		18	-1	53744563	3801
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000018963	protein_coding	alternative2	7	1	142460846	1695
ENSMUSG00000034429	protein_coding	Zfp707	ENSMUST00000147641	protein_coding		15	1	75969307	1644
ENSMUSG00000048799	protein_coding	Cep120	ENSMUST00000235928	retained_intron		18	-1	53744540	474
ENSMUSG00000032532	protein_coding	Cck	ENSMUST00000216176	protein_coding		9	-1	121493564	478
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000114210	nonsense_mediated_decay		5	1	35757931	3042
ENSMUSG00000034429	protein_coding	Zfp707	ENSMUST00000145100	protein_coding		15	1	75969676	596
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000105967	protein_coding	alternative2	7	1	142460864	1395
ENSMUSG00000034429	protein_coding	Zfp707	ENSMUST00000229652	protein_coding		15	1	75972384	2204
ENSMUSG00000022656	protein_coding	Nectin3	ENSMUST00000096052	protein_coding		16	-1	46496852	1746
ENSMUSG00000118362	lincRNA	Gm19466	ENSMUST00000236653	lincRNA		18	1	53639106	529
ENSMUSG00000041731	protein_coding	Pgm5	ENSMUST00000047666	protein_coding	principal1	19	-1	24861855	3239
ENSMUSG00000039269	protein_coding	2300002M23Rik	ENSMUST00000044326	protein_coding	principal1	17	1	35567450	1290
ENSMUSG00000034429	protein_coding	Zfp707	ENSMUST00000156444	retained_intron		15	1	75972783	835
ENSMUSG00000118362	lincRNA	Gm19466	ENSMUST00000235670	lincRNA		18	1	53648151	2308
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000114206	protein_coding		5	1	35757931	3528
ENSMUSG00000039269	protein_coding	2300002M23Rik	ENSMUST00000174246	retained_intron		17	1	35567485	1446
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000141592	processed_transcript		5	1	108065716	3068
ENSMUSG00000022656	protein_coding	Nectin3	ENSMUST00000132089	retained_intron		16	-1	46438633	752
ENSMUSG00000041731	protein_coding	Pgm5	ENSMUST00000133692	processed_transcript		19	-1	24763078	686
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000038946	protein_coding	principal3	7	1	142471843	1828
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000131264	processed_transcript		5	1	108065716	3732
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000199194	retained_intron		5	1	108065717	673
ENSMUSG00000022656	protein_coding	Nectin3	ENSMUST00000023334	protein_coding	principal4	16	-1	46496967	3062
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000114204	protein_coding		5	1	35757966	2953
ENSMUSG00000062028	protein_coding	Irgc1	ENSMUST00000080594	protein_coding	principal1	7	-1	24435534	1737
ENSMUSG00000041731	protein_coding	Pgm5	ENSMUST00000150339	retained_intron		19	-1	24861687	920
ENSMUSG00000022656	protein_coding	Nectin3	ENSMUST00000149901	protein_coding		16	-1	46496772	732
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000172045	protein_coding		5	1	108065729	590
ENSMUSG00000062028	protein_coding	Irgc1	ENSMUST00000205776	protein_coding	principal1	7	-1	24445682	1835
ENSMUSG00000032532	protein_coding	Cck	ENSMUST00000216138	protein_coding		9	-1	121495639	799
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000111781	processed_transcript		5	-1	121537721	1296
ENSMUSG00000070980	protein_coding	Actl7b	ENSMUST00000095080	protein_coding	principal1	4	-1	56741443	1439
ENSMUSG00000041731	protein_coding	Pgm5	ENSMUST00000129127	retained_intron		19	-1	24861652	931
ENSMUSG00000022656	protein_coding	Nectin3	ENSMUST00000133935	processed_transcript		16	-1	46498525	737
ENSMUSG00000049097	protein_coding	Ankrd34a	ENSMUST00000058943	protein_coding	principal1	3	1	96596636	2583
ENSMUSG00000062028	protein_coding	Irgc1	ENSMUST00000205385	protein_coding		7	-1	24452171	383
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000111782	protein_coding		5	-1	121545200	969
ENSMUSG00000109418	TEC	Gm44800	ENSMUST00000207510	TEC		8	-1	9600653	1855
ENSMUSG00000062028	protein_coding	Irgc1	ENSMUST00000206992	processed_transcript		7	-1	24452297	661
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000111786	protein_coding		5	-1	121545200	975
ENSMUSG00000109095	TEC	Gm44799	ENSMUST00000207639	TEC		8	-1	9659449	1202
ENSMUSG00000031079	protein_coding	Zfp300	ENSMUST00000040667	protein_coding	principal1	X	-1	21089229	4634
ENSMUSG00000062028	protein_coding	Irgc1	ENSMUST00000205629	processed_transcript		7	-1	24452287	342
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000153763	processed_transcript		5	-1	121545200	1110
ENSMUSG00000032532	protein_coding	Cck	ENSMUST00000035120	protein_coding	principal1	9	-1	121495694	691
ENSMUSG00000108360	lincRNA	Gm36159	ENSMUST00000206737	lincRNA		7	1	24448354	549
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000129347	protein_coding		5	1	35758051	1995
ENSMUSG00000043336	protein_coding	Filip1l	ENSMUST00000159816	protein_coding	principal1	16	1	57353093	4452
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000154628	retained_intron		5	-1	121531581	838
ENSMUSG00000031079	protein_coding	Zfp300	ENSMUST00000154299	retained_intron		X	-1	21088986	651
ENSMUSG00000031079	protein_coding	Zfp300	ENSMUST00000139060	processed_transcript		X	-1	21089527	674
ENSMUSG00000020183	protein_coding	Cpm	ENSMUST00000020399	protein_coding	principal1	10	1	117629500	5195
ENSMUSG00000070979	protein_coding	Actl7a	ENSMUST00000095079	protein_coding	principal1	4	1	56743413	1513
ENSMUSG00000032532	protein_coding	Cck	ENSMUST00000215228	protein_coding	principal1	9	-1	121494840	783
ENSMUSG00000034387	protein_coding	Ssu2	ENSMUST00000060847	protein_coding		6	-1	112388023	1321
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000151352	nonsense_mediated_decay		5	-1	121535851	540
ENSMUSG00000043336	protein_coding	Filip1l	ENSMUST00000099667	protein_coding		16	1	57353277	1576
ENSMUSG00000019689	protein_coding	Fmc1	ENSMUST00000147651	processed_transcript		6	1	38533502	500
ENSMUSG00000045327	transcribed_processed_pseudogene	6330549D23Rik	ENSMUST00000160818	processed_transcript		3	-1	96629820	3228
ENSMUSG00000032532	protein_coding	Cck	ENSMUST00000213106	protein_coding		9	-1	121494860	385
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000128986	retained_intron		7	1	142471872	2665
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000196315	protein_coding		5	-1	121545231	592
ENSMUSG00000079157	protein_coding	Fam155a	ENSMUST00000110969	protein_coding	principal3	8	-1	9771161	3388
ENSMUSG00000045327	transcribed_processed_pseudogene	6330549D23Rik	ENSMUST00000059190	processed_transcript		3	-1	96629819	2828
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000105966	protein_coding	alternative2	7	1	142472151	1503
ENSMUSG00000115249	antisense	Gm49085	ENSMUST00000228937	antisense		15	1	37960471	5748
ENSMUSG00000029454	protein_coding	Mapkapk5	ENSMUST00000131914	processed_transcript		5	-1	121537184	366
ENSMUSG00000032532	protein_coding	Cck	ENSMUST00000217581	nonsense_mediated_decay		9	-1	121494510	403
ENSMUSG00000020183	protein_coding	Cpm	ENSMUST00000141991	retained_intron		10	1	117675893	2006
ENSMUSG00000034387	protein_coding	Ssu2	ENSMUST00000143134	processed_transcript		6	-1	112377727	1553
ENSMUSG00000045327	transcribed_processed_pseudogene	6330549D23Rik	ENSMUST00000159536	transcribed_processed_pseudogene		3	-1	96608725	1102
ENSMUSG00000034387	protein_coding	Ssu2	ENSMUST00000123254	retained_intron		6	-1	112375720	844
ENSMUSG00000104999	TEC	4930477O15Rik	ENSMUST00000196484	TEC		5	1	121503513	1089
ENSMUSG00000099665	lincRNA	Gm29482	ENSMUST00000187845	lincRNA		1	-1	92760480	230
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000103032	protein_coding	principal3	11	1	115824049	3551
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000132956	processed_transcript		7	1	142474994	729
ENSMUSG00000019689	protein_coding	Fmc1	ENSMUST00000019833	protein_coding	principal1	6	1	38534823	479
ENSMUSG00000079157	protein_coding	Fam155a	ENSMUST00000207297	processed_transcript		8	-1	9323711	1792
ENSMUSG00000111598	lincRNA	Gm47095	ENSMUST00000215630	lincRNA		9	-1	121536151	1062
ENSMUSG00000034387	protein_coding	Ssu2	ENSMUST00000238755	protein_coding	principal1	6	-1	112388018	1183
ENSMUSG00000110814	lincRNA	Gm38661	ENSMUST00000216555	lincRNA		9	1	121523575	5814
ENSMUSG00000079157	protein_coding	Fam155a	ENSMUST00000208933	protein_coding	alternative2	8	-1	9771021	1569
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000130233	protein_coding		5	1	35814359	928
ENSMUSG00000038227	protein_coding	Hoxa9	ENSMUST00000048680	protein_coding	principal1	6	-1	52227370	3226
ENSMUSG00000043336	protein_coding	Filip1l	ENSMUST00000159414	protein_coding		16	1	57549242	3253
ENSMUSG00000072647	protein_coding	Adam1a	ENSMUST00000100757	protein_coding		5	-1	121522071	3496
ENSMUSG00000106240	processed_pseudogene	Gm3544	ENSMUST00000196129	processed_pseudogene		5	1	20588596	305
ENSMUSG00000079157	protein_coding	Fam155a	ENSMUST00000208855	processed_transcript		8	-1	9323288	776
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000114203	protein_coding		5	1	35814426	1333
ENSMUSG00000079157	protein_coding	Fam155a	ENSMUST00000208171	retained_intron		8	-1	9323711	2189
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000133250	protein_coding		11	1	115824058	847
ENSMUSG00000106204	processed_pseudogene	Gm21009	ENSMUST00000197169	processed_pseudogene		5	-1	19506123	1669
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000172552	protein_coding		11	1	115831968	550
ENSMUSG00000079157	protein_coding	Fam155a	ENSMUST00000207869	nonsense_mediated_decay		8	-1	9770104	941
ENSMUSG00000038227	protein_coding	Hoxa9	ENSMUST00000154641	processed_transcript		6	-1	52231089	678
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000155878	protein_coding		11	1	115833925	545
ENSMUSG00000109162	TEC	2900027M19Rik	ENSMUST00000207411	TEC		8	-1	9690276	4448
ENSMUSG00000116877	antisense	4921517D16Rik	ENSMUST00000231497	antisense		16	1	57331951	2040
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000173289	protein_coding		11	1	115834314	643
ENSMUSG00000073174	3prime_overlapping_ncRNA	Gm29254	ENSMUST00000189302	3prime_overlapping_ncRNA		5	1	20702277	883
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000150146	protein_coding		5	1	35814440	415
ENSMUSG00000109040	TEC	Gm44542	ENSMUST00000208677	TEC		8	-1	9217410	4314
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000149521	protein_coding		7	1	142477013	1910
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000178422	protein_coding	principal1	10	1	81183005	1730
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000137900	protein_coding		11	1	115834323	548
ENSMUSG00000073174	3prime_overlapping_ncRNA	Gm29254	ENSMUST00000101556	3prime_overlapping_ncRNA		5	1	20702277	879
ENSMUSG00000048186	protein_coding	Bend7	ENSMUST00000184139	protein_coding	alternative2	2	1	4717831	2251
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000151636	protein_coding		5	1	35828124	660
ENSMUSG00000109551	TEC	4930435N07Rik	ENSMUST00000208065	TEC		8	1	9459092	2127
ENSMUSG00000049288	protein_coding	Lix1l	ENSMUST00000062058	protein_coding	principal1	3	1	96601149	3312
ENSMUSG00000109359	TEC	Gm44797	ENSMUST00000208780	TEC		8	-1	9596945	1837
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000137951	retained_intron		11	1	115853252	576
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000140626	protein_coding		7	1	142483259	739
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000135885	retained_intron		5	1	35828155	508
ENSMUSG00000109385	TEC	Gm44518	ENSMUST00000208080	TEC		8	-1	9375326	4370
ENSMUSG00000038227	protein_coding	Hoxa9	ENSMUST00000114425	protein_coding		6	-1	52226189	851
ENSMUSG00000109139	TEC	Gm44798	ENSMUST00000208123	TEC		8	-1	9620562	2410
ENSMUSG00000039126	protein_coding	Prune2	ENSMUST00000224145	processed_transcript		19	1	16956118	1885
ENSMUSG00000048186	protein_coding	Bend7	ENSMUST00000115022	protein_coding	alternative2	2	1	4717834	1945
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000151322	protein_coding		5	1	35828155	584
ENSMUSG00000100781	antisense	Gm29481	ENSMUST00000189080	antisense		1	-1	92837896	1049
ENSMUSG00000038227	protein_coding	Hoxa9	ENSMUST00000156540	processed_transcript		6	-1	52230279	462
ENSMUSG00000109286	TEC	Gm44541	ENSMUST00000207837	TEC		8	-1	9345126	2907
ENSMUSG00000049288	protein_coding	Lix1l	ENSMUST00000199166	retained_intron		3	1	96618301	623
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000156960	processed_transcript		7	1	142483404	325
ENSMUSG00000108918	TEC	Gm44802	ENSMUST00000208026	TEC		8	-1	9711086	1916
ENSMUSG00000081243	processed_pseudogene	Gm14037	ENSMUST00000120576	processed_pseudogene		2	-1	134731107	313
ENSMUSG00000101995	antisense	Gm29480	ENSMUST00000188589	antisense		1	-1	92848771	1655
ENSMUSG00000037946	protein_coding	Fgd3	ENSMUST00000110087	protein_coding	principal1	13	-1	49309240	4698
ENSMUSG00000109529	TEC	Gm44801	ENSMUST00000207644	TEC		8	-1	9605882	2060
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000125378	protein_coding		5	1	35841354	717
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000130518	processed_transcript		11	1	115853736	566
ENSMUSG00000038227	protein_coding	Hoxa9	ENSMUST00000174115	retained_intron		6	-1	52230532	2286
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000126149	retained_intron		7	1	142489017	451
ENSMUSG00000025328	protein_coding	Padi3	ENSMUST00000026377	protein_coding	principal1	4	-1	140810648	3072
ENSMUSG00000083879	processed_pseudogene	Gm14038	ENSMUST00000121500	processed_pseudogene		2	-1	134763630	807
ENSMUSG00000047213	protein_coding	Ythdf3	ENSMUST00000108345	protein_coding	principal1	3	1	16183212	5102
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000128826	protein_coding		11	1	115853803	791
ENSMUSG00000084995	antisense	Lyzl4os	ENSMUST00000128080	antisense		9	1	121586997	522
ENSMUSG00000109183	lincRNA	Gm44761	ENSMUST00000209080	lincRNA		8	1	9800194	440
ENSMUSG00000018819	protein_coding	Lsp1	ENSMUST00000142408	retained_intron		7	1	142489813	689
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000022469	protein_coding		14	-1	31206801	5559
ENSMUSG00000037946	protein_coding	Fgd3	ENSMUST00000048716	protein_coding	principal1	13	-1	49299020	3519
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000217936	retained_intron		10	1	81183017	1171
ENSMUSG00000025328	protein_coding	Padi3	ENSMUST00000172098	protein_coding		4	-1	140804022	3310
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000153025	retained_intron		5	1	35848776	2864
ENSMUSG00000084995	antisense	Lyzl4os	ENSMUST00000156364	antisense		9	1	121587020	726
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000147878	retained_intron		11	1	115854233	863
ENSMUSG00000084995	antisense	Lyzl4os	ENSMUST00000213548	antisense		9	1	121602844	171
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000130209	retained_intron		5	1	35857066	476
ENSMUSG00000022748	protein_coding	Cmss1	ENSMUST00000114371	protein_coding	principal1	16	-1	57606846	1150
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000132999	retained_intron		11	1	115855032	451
ENSMUSG00000095279	lincRNA	Gm10067	ENSMUST00000208376	lincRNA		8	-1	9919463	2127
ENSMUSG00000111844	TEC	Gm47097	ENSMUST00000214838	TEC		9	-1	121631370	1480
ENSMUSG00000029095	protein_coding	Ablim2	ENSMUST00000153529	protein_coding		5	1	35857894	428
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000220076	retained_intron		10	1	81183069	1204
ENSMUSG00000095279	lincRNA	Gm10067	ENSMUST00000179462	pseudogene		8	-1	9876897	348
ENSMUSG00000037946	protein_coding	Fgd3	ENSMUST00000110086	protein_coding		13	-1	49320311	2628
ENSMUSG00000022748	protein_coding	Cmss1	ENSMUST00000231282	processed_transcript		16	-1	57606776	610
ENSMUSG00000020782	protein_coding	Llgl2	ENSMUST00000177736	protein_coding	alternative2	11	1	115824058	3612
ENSMUSG00000048186	protein_coding	Bend7	ENSMUST00000056914	protein_coding	principal3	2	1	4718145	2302
ENSMUSG00000112809	lincRNA	Gm47915	ENSMUST00000217870	lincRNA		10	-1	53803529	764
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000219133	protein_coding		10	1	81183263	844
ENSMUSG00000022748	protein_coding	Cmss1	ENSMUST00000232413	protein_coding		16	-1	57606864	529
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000219329	retained_intron		10	1	81183340	614
ENSMUSG00000034212	protein_coding	Ankmy1	ENSMUST00000212504	protein_coding		1	-1	92871720	1809
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000218157	protein_coding		10	1	81183344	729
ENSMUSG00000047213	protein_coding	Ythdf3	ENSMUST00000193598	processed_transcript		3	1	16183236	723
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000218698	retained_intron		10	1	81183848	734
ENSMUSG00000048186	protein_coding	Bend7	ENSMUST00000138322	processed_transcript		2	1	4752717	2860
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000219850	protein_coding	principal1	10	1	81183918	1482
ENSMUSG00000102042	processed_pseudogene	Gm29195	ENSMUST00000189038	processed_pseudogene		Y	1	5973657	379
ENSMUSG00000047213	protein_coding	Ythdf3	ENSMUST00000191774	protein_coding		3	1	16183236	3196
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000218227	protein_coding		10	1	81190501	403
ENSMUSG00000010607	protein_coding	Pigyl	ENSMUST00000123680	protein_coding	principal1	9	1	22156846	695
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000219944	retained_intron		10	1	81191556	630
ENSMUSG00000034974	protein_coding	Dapk3	ENSMUST00000047665	protein_coding	principal1	10	1	81183263	1676
ENSMUSG00000100878	unprocessed_pseudogene	Gm29196	ENSMUST00000189239	unprocessed_pseudogene		Y	1	5986815	618
ENSMUSG00000099721	unprocessed_pseudogene	Gm28435	ENSMUST00000185496	unprocessed_pseudogene		Y	-1	5998731	108
ENSMUSG00000101619	unprocessed_pseudogene	Gm28436	ENSMUST00000186307	unprocessed_pseudogene		Y	1	6018394	698
ENSMUSG00000010607	protein_coding	Pigyl	ENSMUST00000148088	protein_coding	principal1	9	1	22156946	676
ENSMUSG00000100710	unprocessed_pseudogene	Gm29197	ENSMUST00000185922	unprocessed_pseudogene		Y	1	6084520	702
ENSMUSG00000104144	unprocessed_pseudogene	Gm18433	ENSMUST00000192747	unprocessed_pseudogene		3	1	93689841	197
ENSMUSG00000022292	protein_coding	Rrm2b	ENSMUST00000022901	protein_coding	principal1	15	-1	37961103	4561
ENSMUSG00000103350	protein_coding	Tdpoz6	ENSMUST00000193565	protein_coding	principal1	3	-1	93693070	1021
ENSMUSG00000073408	protein_coding	Mucl3	ENSMUST00000095467	protein_coding	principal1	17	-1	35643695	2611
ENSMUSG00000072647	protein_coding	Adam1a	ENSMUST00000200170	protein_coding	principal1	5	-1	121545482	4783
ENSMUSG00000047213	protein_coding	Ythdf3	ENSMUST00000108346	protein_coding		3	1	16183236	4929
ENSMUSG00000054892	protein_coding	Txk	ENSMUST00000169534	protein_coding	principal3	5	-1	72736602	2344
ENSMUSG00000091625	protein_coding	Lsm5	ENSMUST00000170382	protein_coding	principal1	6	-1	56704692	494
ENSMUSG00000090509	protein_coding	Sfta2	ENSMUST00000174521	protein_coding		17	1	35601549	649
ENSMUSG00000022292	protein_coding	Rrm2b	ENSMUST00000137636	protein_coding		15	-1	37960891	900
ENSMUSG00000022292	protein_coding	Rrm2b	ENSMUST00000146821	protein_coding		15	-1	37960891	420
ENSMUSG00000091625	protein_coding	Lsm5	ENSMUST00000203958	protein_coding		6	-1	56704710	416
ENSMUSG00000090509	protein_coding	Sfta2	ENSMUST00000174534	processed_transcript		17	1	35601578	694
ENSMUSG00000022292	protein_coding	Rrm2b	ENSMUST00000153481	nonsense_mediated_decay		15	-1	37960891	389
ENSMUSG00000091625	protein_coding	Lsm5	ENSMUST00000175865	retained_intron		6	-1	56704677	757
ENSMUSG00000048616	protein_coding	Nog	ENSMUST00000061728	protein_coding	principal1	11	-1	89302332	1695
ENSMUSG00000022292	protein_coding	Rrm2b	ENSMUST00000144498	nonsense_mediated_decay		15	-1	37960929	658
ENSMUSG00000054892	protein_coding	Txk	ENSMUST00000197313	protein_coding		5	-1	72752773	2190
ENSMUSG00000091625	protein_coding	Lsm5	ENSMUST00000177144	nonsense_mediated_decay		6	-1	56704656	366
ENSMUSG00000022292	protein_coding	Rrm2b	ENSMUST00000127362	retained_intron		15	-1	37955138	1782
ENSMUSG00000090509	protein_coding	Sfta2	ENSMUST00000171166	protein_coding	principal1	17	1	35649708	508
ENSMUSG00000101450	sense_intronic	Gm28941	ENSMUST00000185536	sense_intronic		1	1	82739691	1017
ENSMUSG00000091625	protein_coding	Lsm5	ENSMUST00000176595	protein_coding		6	-1	56704683	274
ENSMUSG00000022292	protein_coding	Rrm2b	ENSMUST00000145175	protein_coding		15	-1	37960849	690
ENSMUSG00000054892	protein_coding	Txk	ENSMUST00000113604	protein_coding	alternative2	5	-1	72752777	2260
ENSMUSG00000022292	protein_coding	Rrm2b	ENSMUST00000227688	retained_intron		15	-1	37948442	2814
ENSMUSG00000097564	processed_transcript	C430014B12Rik	ENSMUST00000181720	antisense		1	-1	82725117	1001
ENSMUSG00000022528	protein_coding	Hes1	ENSMUST00000160592	processed_transcript		16	1	30064384	344
ENSMUSG00000097564	processed_transcript	C430014B12Rik	ENSMUST00000186858	antisense		1	-1	82725169	657
ENSMUSG00000097564	processed_transcript	C430014B12Rik	ENSMUST00000187869	retained_intron		1	-1	82725147	3377
ENSMUSG00000022292	protein_coding	Rrm2b	ENSMUST00000145155	protein_coding		15	-1	37961318	357
ENSMUSG00000054892	protein_coding	Txk	ENSMUST00000198464	protein_coding		5	-1	72752773	2271
ENSMUSG00000085442	processed_pseudogene	Gm3362	ENSMUST00000148102	processed_pseudogene		15	-1	37943792	466
ENSMUSG00000090588	protein_coding	Gm9573	ENSMUST00000164502	protein_coding	principal1	17	-1	35626637	5231
ENSMUSG00000083666	processed_pseudogene	Gm12358	ENSMUST00000121842	processed_pseudogene		11	-1	99306140	520
ENSMUSG00000029787	protein_coding	Avl9	ENSMUST00000205188	retained_intron		6	1	56714899	1414
ENSMUSG00000104068	TEC	Gm37199	ENSMUST00000193881	TEC		3	-1	50628411	4065
ENSMUSG00000090588	protein_coding	Gm9573	ENSMUST00000173759	processed_transcript		17	-1	35626610	525
ENSMUSG00000104281	TEC	Gm37461	ENSMUST00000193929	TEC		3	-1	50683401	3704
ENSMUSG00000103012	TEC	Gm37548	ENSMUST00000194519	TEC		3	-1	50887059	3814
ENSMUSG00000022528	protein_coding	Hes1	ENSMUST00000023171	protein_coding	principal1	16	1	30065340	1468
ENSMUSG00000022528	protein_coding	Hes1	ENSMUST00000161676	retained_intron		16	1	30066097	406
ENSMUSG00000022528	protein_coding	Hes1	ENSMUST00000161839	processed_transcript		16	1	30066338	653
ENSMUSG00000000706	protein_coding	Btn1a1	ENSMUST00000041674	protein_coding	principal1	13	-1	23465875	3423
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000143739	protein_coding		12	1	10369973	1570
ENSMUSG00000085798	lincRNA	Gm2018	ENSMUST00000140754	lincRNA		11	1	89302723	478
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000170253	protein_coding		14	-1	31187207	589
ENSMUSG00000116896	processed_pseudogene	Gm49792	ENSMUST00000232026	processed_pseudogene		17	1	3042024	280
ENSMUSG00000005609	protein_coding	Ctr9	ENSMUST00000005749	protein_coding	principal1	7	1	111028951	4300
ENSMUSG00000000706	protein_coding	Btn1a1	ENSMUST00000110434	protein_coding		13	-1	23465901	1077
ENSMUSG00000068141	processed_pseudogene	Gm10232	ENSMUST00000089221	processed_pseudogene		17	-1	3044733	720
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000169628	protein_coding		14	-1	31174282	1204
ENSMUSG00000000706	protein_coding	Btn1a1	ENSMUST00000225831	processed_transcript		13	-1	23465409	647
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000167449	protein_coding		14	-1	31173728	856
ENSMUSG00000032530	protein_coding	Lyzl4	ENSMUST00000077706	protein_coding	principal1	9	-1	121641566	996
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000163552	processed_transcript		14	-1	31176588	725
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000168451	processed_transcript		14	-1	31203390	689
ENSMUSG00000054892	protein_coding	Txk	ENSMUST00000198970	processed_transcript		5	-1	72735906	2439
ENSMUSG00000049717	protein_coding	Lig4	ENSMUST00000095476	protein_coding	principal1	8	-1	9976299	5028
ENSMUSG00000026479	protein_coding	Lamc2	ENSMUST00000185356	protein_coding	principal1	1	-1	153186047	4916
ENSMUSG00000024768	protein_coding	Lipf	ENSMUST00000025680	protein_coding	principal1	19	1	33961187	1411
ENSMUSG00000054892	protein_coding	Txk	ENSMUST00000198798	processed_transcript		5	-1	72735906	2276
ENSMUSG00000032530	protein_coding	Lyzl4	ENSMUST00000120918	protein_coding	principal1	9	-1	121642096	959
ENSMUSG00000005609	protein_coding	Ctr9	ENSMUST00000152019	retained_intron		7	1	111028995	2987
ENSMUSG00000049717	protein_coding	Lig4	ENSMUST00000170033	protein_coding	principal1	8	-1	9977686	3105
ENSMUSG00000054892	protein_coding	Txk	ENSMUST00000197843	retained_intron		5	-1	72752774	5303
ENSMUSG00000005609	protein_coding	Ctr9	ENSMUST00000146709	retained_intron		7	1	111029013	765
ENSMUSG00000027297	protein_coding	Ltk	ENSMUST00000140224	protein_coding	alternative2	2	-1	119758525	2240
ENSMUSG00000054892	protein_coding	Txk	ENSMUST00000197923	retained_intron		5	-1	72752770	4210
ENSMUSG00000032530	protein_coding	Lyzl4	ENSMUST00000213757	protein_coding		9	-1	121641498	832
ENSMUSG00000105089	processed_pseudogene	Gm43717	ENSMUST00000198684	processed_pseudogene		5	1	72726062	310
ENSMUSG00000026479	protein_coding	Lamc2	ENSMUST00000189005	retained_intron		1	-1	153127234	440
ENSMUSG00000005609	protein_coding	Ctr9	ENSMUST00000143818	retained_intron		7	1	111030215	464
ENSMUSG00000026479	protein_coding	Lamc2	ENSMUST00000188206	protein_coding		1	-1	153126915	818
ENSMUSG00000091230	processed_pseudogene	H1f11-ps	ENSMUST00000169692	processed_pseudogene		19	-1	47171134	666
ENSMUSG00000005609	protein_coding	Ctr9	ENSMUST00000140220	retained_intron		7	1	111034036	535
ENSMUSG00000032530	protein_coding	Lyzl4	ENSMUST00000125075	protein_coding		9	-1	121641526	479
ENSMUSG00000035831	protein_coding	Krt25	ENSMUST00000038004	protein_coding	principal1	11	-1	99322951	1989
ENSMUSG00000032530	protein_coding	Lyzl4	ENSMUST00000214592	protein_coding		9	-1	121641571	464
ENSMUSG00000005609	protein_coding	Ctr9	ENSMUST00000146558	retained_intron		7	1	111046310	437
ENSMUSG00000005609	protein_coding	Ctr9	ENSMUST00000157025	retained_intron		7	1	111046310	1594
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000169906	processed_transcript		14	-1	31181470	1206
ENSMUSG00000102614	TEC	Gm37843	ENSMUST00000195213	TEC		3	-1	50921525	2639
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000170436	nonsense_mediated_decay		14	-1	31185322	761
ENSMUSG00000026479	protein_coding	Lamc2	ENSMUST00000185328	retained_intron		1	-1	153152086	717
ENSMUSG00000034212	protein_coding	Ankmy1	ENSMUST00000160548	protein_coding	alternative2	1	-1	92902906	3246
ENSMUSG00000005609	protein_coding	Ctr9	ENSMUST00000123681	processed_transcript		7	1	111050993	392
ENSMUSG00000103652	TEC	Gm37209	ENSMUST00000194109	TEC		3	-1	50978811	1276
ENSMUSG00000005609	protein_coding	Ctr9	ENSMUST00000209912	retained_intron		7	1	111053790	2412
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000134026	nonsense_mediated_decay		5	1	108065742	1932
ENSMUSG00000034212	protein_coding	Ankmy1	ENSMUST00000112998	protein_coding	principal3	1	-1	92902906	3243
ENSMUSG00000042055	protein_coding	Wdr11	ENSMUST00000084519	protein_coding	principal1	7	1	129591863	4550
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000164956	processed_transcript		14	-1	31192619	736
ENSMUSG00000026479	protein_coding	Lamc2	ENSMUST00000188831	retained_intron		1	-1	153186447	2255
ENSMUSG00000029787	protein_coding	Avl9	ENSMUST00000031805	protein_coding	principal1	6	1	56714927	6670
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000163846	retained_intron		14	-1	31185642	632
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000143412	nonsense_mediated_decay		5	1	108065742	3330
ENSMUSG00000020962	protein_coding	Gtf2a1	ENSMUST00000021345	protein_coding	principal1	12	-1	91590009	6064
ENSMUSG00000026479	protein_coding	Lamc2	ENSMUST00000027753	protein_coding	principal1	1	-1	153186447	5164
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000167223	retained_intron		14	-1	31182829	431
ENSMUSG00000103693	sense_intronic	Gm37529	ENSMUST00000195618	sense_intronic		1	-1	160327078	4321
ENSMUSG00000109765	unprocessed_pseudogene	Gm18227	ENSMUST00000211082	unprocessed_pseudogene		9	1	22167479	1468
ENSMUSG00000029787	protein_coding	Avl9	ENSMUST00000177249	protein_coding		6	1	56714938	1614
ENSMUSG00000103632	TEC	Gm38329	ENSMUST00000193473	TEC		1	-1	160728160	427
ENSMUSG00000104229	unprocessed_pseudogene	Gm18433	ENSMUST00000195682	unprocessed_pseudogene		3	1	93708072	196
ENSMUSG00000103391	TEC	Gm38302	ENSMUST00000191676	TEC		1	-1	160606190	2076
ENSMUSG00000104053	TEC	Gm38126	ENSMUST00000195297	TEC		1	1	160755687	4003
ENSMUSG00000061167	processed_pseudogene	Rpl15-ps3	ENSMUST00000088480	processed_pseudogene		9	-1	22186221	615
ENSMUSG00000029787	protein_coding	Avl9	ENSMUST00000204193	nonsense_mediated_decay		6	1	56714942	585
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000172142	protein_coding	principal1	14	-1	31206826	2780
ENSMUSG00000102511	unprocessed_pseudogene	Gm38086	ENSMUST00000193543	unprocessed_pseudogene		3	-1	93725051	434
ENSMUSG00000118401	protein_coding	Gpr52	ENSMUST00000238289	protein_coding	principal1	1	-1	160577974	1637
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000164000	processed_transcript		14	-1	31184949	389
ENSMUSG00000029787	protein_coding	Avl9	ENSMUST00000176560	retained_intron		6	1	56740913	1198
ENSMUSG00000102067	lincRNA	Gm29230	ENSMUST00000189687	lincRNA		3	-1	51074856	412
ENSMUSG00000103200	sense_intronic	Gm37328	ENSMUST00000193191	sense_intronic		1	-1	160726681	640
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000170343	processed_transcript		14	-1	31191497	747
ENSMUSG00000103464	lincRNA	Gm38246	ENSMUST00000194318	lincRNA		3	1	51103660	1511
ENSMUSG00000103210	unprocessed_pseudogene	Gm5852	ENSMUST00000194119	unprocessed_pseudogene		3	-1	93728046	1021
ENSMUSG00000049093	protein_coding	Il23r	ENSMUST00000118364	protein_coding	principal1	6	-1	67491855	2488
ENSMUSG00000020962	protein_coding	Gtf2a1	ENSMUST00000063314	protein_coding		12	-1	91590487	2265
ENSMUSG00000039126	protein_coding	Prune2	ENSMUST00000087689	protein_coding	principal1	19	1	16956118	12512
ENSMUSG00000020962	protein_coding	Gtf2a1	ENSMUST00000163693	retained_intron		12	-1	91589639	282
ENSMUSG00000109634	lincRNA	Gm45474	ENSMUST00000209471	lincRNA		7	-1	47050296	408
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000165981	protein_coding		14	-1	31206700	2415
ENSMUSG00000075570	protein_coding	Krt26	ENSMUST00000148770	processed_transcript		11	-1	99337965	3667
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000164989	nonsense_mediated_decay		14	-1	31206700	2276
ENSMUSG00000021210	protein_coding	Akr1c6	ENSMUST00000021630	protein_coding	principal1	13	1	4434306	1396
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000167979	retained_intron		14	-1	31187452	918
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000169149	nonsense_mediated_decay		14	-1	31203311	683
ENSMUSG00000021210	protein_coding	Akr1c6	ENSMUST00000220941	nonsense_mediated_decay		13	1	4434356	568
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000172370	retained_intron		14	-1	31191089	645
ENSMUSG00000021210	protein_coding	Akr1c6	ENSMUST00000128695	processed_transcript		13	1	4434432	362
ENSMUSG00000000869	protein_coding	Il4	ENSMUST00000127858	processed_transcript		11	-1	53617224	541
ENSMUSG00000021210	protein_coding	Akr1c6	ENSMUST00000156277	protein_coding		13	1	4436146	733
ENSMUSG00000112140	processed_pseudogene	Gm5780	ENSMUST00000217774	processed_pseudogene		10	-1	90134817	1834
ENSMUSG00000112601	TEC	Gm47590	ENSMUST00000218261	TEC		10	1	90851099	2976
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000164617	retained_intron		14	-1	31206700	3716
ENSMUSG00000021210	protein_coding	Akr1c6	ENSMUST00000223118	protein_coding		13	1	4447095	579
ENSMUSG00000067341	protein_coding	H2-Eb2	ENSMUST00000050325	protein_coding	principal1	17	1	34325665	3392
ENSMUSG00000039126	protein_coding	Prune2	ENSMUST00000226052	processed_transcript		19	1	17125647	1528
ENSMUSG00000112153	sense_intronic	Gm47591	ENSMUST00000218673	sense_intronic		10	1	90728960	2728
ENSMUSG00000032528	protein_coding	Vipr1	ENSMUST00000035115	protein_coding	principal1	9	1	121642716	4902
ENSMUSG00000100292	lincRNA	Gm29198	ENSMUST00000190102	lincRNA		Y	-1	6201677	1512
ENSMUSG00000039126	protein_coding	Prune2	ENSMUST00000223920	protein_coding		19	1	17136766	1803
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000171735	protein_coding		14	-1	31206701	1763
ENSMUSG00000034220	protein_coding	Gpc1	ENSMUST00000045970	protein_coding	principal1	1	1	92831645	4176
ENSMUSG00000068879	protein_coding	Gm5773	ENSMUST00000090853	protein_coding	principal1	3	1	93773000	1143
ENSMUSG00000010307	protein_coding	Tmem86a	ENSMUST00000010451	protein_coding	principal1	7	1	47050601	1831
ENSMUSG00000039126	protein_coding	Prune2	ENSMUST00000225351	protein_coding		19	1	17136766	2115
ENSMUSG00000021910	protein_coding	Nisch	ENSMUST00000167602	processed_transcript		14	-1	31216946	493
ENSMUSG00000032528	protein_coding	Vipr1	ENSMUST00000213272	processed_transcript		9	1	121642761	508
ENSMUSG00000075570	protein_coding	Krt26	ENSMUST00000100482	protein_coding	principal1	11	-1	99337966	2471
ENSMUSG00000001156	protein_coding	Mxd1	ENSMUST00000001184	protein_coding	principal1	6	-1	86669161	4666
ENSMUSG00000034220	protein_coding	Gpc1	ENSMUST00000191373	processed_transcript		1	1	92831969	434
ENSMUSG00000039126	protein_coding	Prune2	ENSMUST00000224602	retained_intron		19	1	17136775	946
ENSMUSG00000101081	lincRNA	Gm29193	ENSMUST00000187129	lincRNA		Y	1	6220975	830
ENSMUSG00000032528	protein_coding	Vipr1	ENSMUST00000139189	processed_transcript		9	1	121643051	412
ENSMUSG00000010307	protein_coding	Tmem86a	ENSMUST00000211066	processed_transcript		7	1	47051865	568
ENSMUSG00000039126	protein_coding	Prune2	ENSMUST00000224059	processed_transcript		19	1	17138739	1377
ENSMUSG00000034220	protein_coding	Gpc1	ENSMUST00000190586	retained_intron		1	1	92853198	759
ENSMUSG00000107541	processed_pseudogene	Gm44336	ENSMUST00000203696	processed_pseudogene		6	-1	112393817	468
ENSMUSG00000001156	protein_coding	Mxd1	ENSMUST00000203946	protein_coding		6	-1	86663105	418
ENSMUSG00000039126	protein_coding	Prune2	ENSMUST00000225838	retained_intron		19	1	17208251	1881
ENSMUSG00000032528	protein_coding	Vipr1	ENSMUST00000129394	retained_intron		9	1	121664615	763
ENSMUSG00000039126	protein_coding	Prune2	ENSMUST00000224117	retained_intron		19	1	17214314	4448
ENSMUSG00000034220	protein_coding	Gpc1	ENSMUST00000190677	retained_intron		1	1	92856562	727
ENSMUSG00000099815	lincRNA	Gm28430	ENSMUST00000191031	lincRNA		Y	-1	6227191	628
ENSMUSG00000112155	lincRNA	4930477N07Rik	ENSMUST00000218762	lincRNA		10	1	119320234	614
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000167927	nonsense_mediated_decay		19	-1	41981114	7875
ENSMUSG00000110757	unprocessed_pseudogene	Gm18228	ENSMUST00000217297	unprocessed_pseudogene		9	1	22204493	1091
ENSMUSG00000032528	protein_coding	Vipr1	ENSMUST00000149959	retained_intron		9	1	121668713	224
ENSMUSG00000118404	unprocessed_pseudogene	Gm21746	ENSMUST00000238683	unprocessed_pseudogene		Y	-1	6237995	543
ENSMUSG00000034220	protein_coding	Gpc1	ENSMUST00000190215	retained_intron		1	1	92856768	698
ENSMUSG00000001156	protein_coding	Mxd1	ENSMUST00000204437	nonsense_mediated_decay		6	-1	86669100	912
ENSMUSG00000042055	protein_coding	Wdr11	ENSMUST00000143422	retained_intron		7	1	129591908	2780
ENSMUSG00000042055	protein_coding	Wdr11	ENSMUST00000136734	retained_intron		7	1	129591918	4989
ENSMUSG00000001156	protein_coding	Mxd1	ENSMUST00000205076	retained_intron		6	-1	86669117	2615
ENSMUSG00000000869	protein_coding	Il4	ENSMUST00000150568	protein_coding		11	-1	53617338	605
ENSMUSG00000083407	processed_pseudogene	Gm13176	ENSMUST00000117910	processed_pseudogene		2	-1	4834612	477
ENSMUSG00000061742	protein_coding	Slc22a12	ENSMUST00000113451	protein_coding	principal1	19	-1	6543032	2226
ENSMUSG00000000869	protein_coding	Il4	ENSMUST00000140684	protein_coding		11	-1	53618352	530
ENSMUSG00000108291	TEC	Gm44292	ENSMUST00000205194	TEC		6	-1	86665551	2364
ENSMUSG00000101525	lincRNA	Gm28593	ENSMUST00000190989	lincRNA		Y	1	6259341	2170
ENSMUSG00000062694	protein_coding	Cav3	ENSMUST00000075477	protein_coding	principal1	6	1	112459505	1157
ENSMUSG00000113746	lincRNA	Gm48242	ENSMUST00000221198	lincRNA		12	-1	82169105	256
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000139954	nonsense_mediated_decay		11	1	116852440	2586
ENSMUSG00000108322	lincRNA	5430431A17Rik	ENSMUST00000235440	lincRNA		7	1	44473538	1332
ENSMUSG00000074472	protein_coding	Zfp872	ENSMUST00000217301	protein_coding		9	1	22188090	647
ENSMUSG00000061742	protein_coding	Slc22a12	ENSMUST00000129698	processed_transcript		19	-1	6541549	1192
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000125920	retained_intron		11	1	116853295	1575
ENSMUSG00000061742	protein_coding	Slc22a12	ENSMUST00000126142	protein_coding		19	-1	6542711	821
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000135135	processed_transcript		11	1	116853474	343
ENSMUSG00000111473	unitary_pseudogene	LOC102637012	ENSMUST00000217248	unitary_pseudogene		7	-1	47074687	2562
ENSMUSG00000117897	TEC	Gm50151	ENSMUST00000237846	TEC		19	-1	6460107	2689
ENSMUSG00000108322	lincRNA	5430431A17Rik	ENSMUST00000206342	lincRNA		7	1	44484517	795
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000136012	nonsense_mediated_decay		11	1	116853762	4263
ENSMUSG00000074472	protein_coding	Zfp872	ENSMUST00000178901	protein_coding	principal1	9	1	22188168	2958
ENSMUSG00000078924	protein_coding	Gm12169	ENSMUST00000109228	protein_coding	principal1	11	1	46524212	1065
ENSMUSG00000074472	protein_coding	Zfp872	ENSMUST00000091508	protein_coding		9	1	22197067	1395
ENSMUSG00000090925	antisense	1810064F22Rik	ENSMUST00000187399	antisense		9	-1	22213839	630
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000126661	retained_intron		11	1	116853779	382
ENSMUSG00000000869	protein_coding	Il4	ENSMUST00000000889	protein_coding	principal1	11	-1	53618669	590
ENSMUSG00000091898	protein_coding	Tnnc1	ENSMUST00000169169	protein_coding	principal1	14	1	31208312	721
ENSMUSG00000090925	antisense	1810064F22Rik	ENSMUST00000188595	antisense		9	-1	22213860	2307
ENSMUSG00000049112	protein_coding	Oxtr	ENSMUST00000053306	protein_coding	principal1	6	-1	112489943	4704
ENSMUSG00000090925	antisense	1810064F22Rik	ENSMUST00000167359	antisense		9	-1	22208546	1206
ENSMUSG00000091898	protein_coding	Tnnc1	ENSMUST00000170268	nonsense_mediated_decay		14	1	31208330	584
ENSMUSG00000049112	protein_coding	Oxtr	ENSMUST00000204027	protein_coding		6	-1	112488394	3721
ENSMUSG00000060256	protein_coding	Tdpoz4	ENSMUST00000075953	protein_coding	principal1	3	1	93796398	1113
ENSMUSG00000091898	protein_coding	Tnnc1	ENSMUST00000161399	retained_intron		14	1	31208332	660
ENSMUSG00000042055	protein_coding	Wdr11	ENSMUST00000148752	nonsense_mediated_decay		7	1	129593068	3155
ENSMUSG00000115100	lincRNA	Gm34934	ENSMUST00000228370	lincRNA		14	-1	46882757	1512
ENSMUSG00000101549	lincRNA	Gm29630	ENSMUST00000185761	lincRNA		1	-1	132280411	359
ENSMUSG00000083443	processed_pseudogene	Gm15519	ENSMUST00000120088	processed_pseudogene		6	1	112563642	1566
ENSMUSG00000089808	processed_pseudogene	Gm7241	ENSMUST00000159853	processed_pseudogene		1	1	132284453	357
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000085077	protein_coding	principal2	7	-1	84410119	6151
ENSMUSG00000115100	lincRNA	Gm34934	ENSMUST00000227016	lincRNA		14	-1	46880702	2705
ENSMUSG00000115100	lincRNA	Gm34934	ENSMUST00000228024	lincRNA		14	-1	46882757	1855
ENSMUSG00000042055	protein_coding	Wdr11	ENSMUST00000143849	processed_transcript		7	1	129605078	558
ENSMUSG00000113943	lincRNA	Gm47804	ENSMUST00000222304	lincRNA		12	-1	91617677	446
ENSMUSG00000023087	protein_coding	Noct	ENSMUST00000023849	protein_coding	principal2	3	1	51224447	3059
ENSMUSG00000029633	processed_pseudogene	Gm5578	ENSMUST00000121490	processed_pseudogene		6	1	112605544	1236
ENSMUSG00000058005	protein_coding	Tdpoz3	ENSMUST00000081780	protein_coding	principal1	3	1	93826020	1098
ENSMUSG00000042055	protein_coding	Wdr11	ENSMUST00000149541	retained_intron		7	1	129606569	5418
ENSMUSG00000116498	lincRNA	Gm38563	ENSMUST00000229334	lincRNA		15	1	61157869	715
ENSMUSG00000042055	protein_coding	Wdr11	ENSMUST00000206442	protein_coding		7	1	129607807	402
ENSMUSG00000103512	unprocessed_pseudogene	Gm37430	ENSMUST00000193039	unprocessed_pseudogene		3	1	93871347	196
ENSMUSG00000042055	protein_coding	Wdr11	ENSMUST00000140877	retained_intron		7	1	129625056	2191
ENSMUSG00000020573	protein_coding	Pik3cg	ENSMUST00000156904	nonsense_mediated_decay		12	-1	32208611	4805
ENSMUSG00000042055	protein_coding	Wdr11	ENSMUST00000136560	nonsense_mediated_decay		7	1	129629033	618
ENSMUSG00000100290	processed_pseudogene	Gm18552	ENSMUST00000187425	processed_pseudogene		1	-1	110411280	538
ENSMUSG00000001123	protein_coding	Lgals9	ENSMUST00000108268	protein_coding	alternative2	11	-1	78984946	1520
ENSMUSG00000023087	protein_coding	Noct	ENSMUST00000144826	protein_coding	alternative2	3	1	51240206	9797
ENSMUSG00000100758	processed_pseudogene	Gm3332	ENSMUST00000189337	processed_pseudogene		1	1	110475603	928
ENSMUSG00000099926	processed_pseudogene	Gm6693	ENSMUST00000189583	processed_pseudogene		1	1	110600021	813
ENSMUSG00000036322	polymorphic_pseudogene	H2-Ea	ENSMUST00000134042	polymorphic_pseudogene	principal1	17	-1	34344644	687
ENSMUSG00000023087	protein_coding	Noct	ENSMUST00000193018	protein_coding		3	1	51243408	805
ENSMUSG00000020573	protein_coding	Pik3cg	ENSMUST00000053215	protein_coding	principal1	12	-1	32208659	5871
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000081567	protein_coding	principal1	5	1	108065742	4060
ENSMUSG00000023087	protein_coding	Noct	ENSMUST00000167780	protein_coding	principal2	3	1	51224470	2992
ENSMUSG00000094504	protein_coding	Gm5294	ENSMUST00000179205	protein_coding	principal1	5	1	138820080	651
ENSMUSG00000103313	TEC	Gm38357	ENSMUST00000195382	TEC		3	1	51231917	2464
ENSMUSG00000001123	protein_coding	Lgals9	ENSMUST00000073001	protein_coding	alternative2	11	-1	78984831	1074
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000170319	protein_coding		5	1	108065744	778
ENSMUSG00000036322	polymorphic_pseudogene	H2-Ea	ENSMUST00000235482	protein_coding	principal1	17	-1	34344645	1036
ENSMUSG00000020573	protein_coding	Pik3cg	ENSMUST00000220366	protein_coding	principal1	12	-1	32208338	4660
ENSMUSG00000001123	protein_coding	Lgals9	ENSMUST00000140073	retained_intron		11	-1	78970330	742
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000209133	protein_coding	alternative2	7	-1	84367911	6228
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000112626	protein_coding		5	1	108065744	1968
ENSMUSG00000108580	lincRNA	Gm39094	ENSMUST00000206679	lincRNA		7	1	129658928	624
ENSMUSG00000102169	unprocessed_pseudogene	Gm9113	ENSMUST00000192510	unprocessed_pseudogene		3	-1	93874386	1018
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000208232	protein_coding	alternative2	7	-1	84372531	6047
ENSMUSG00000022543	transcribed_unitary_pseudogene	4930451G09Rik	ENSMUST00000090457	processed_transcript		16	1	4964289	2831
ENSMUSG00000108580	lincRNA	Gm39094	ENSMUST00000205844	lincRNA		7	1	129659016	287
ENSMUSG00000042115	protein_coding	Klhdc8a	ENSMUST00000046071	protein_coding	principal1	1	1	132298626	4269
ENSMUSG00000020573	protein_coding	Pik3cg	ENSMUST00000085469	protein_coding	principal1	12	-1	32208470	4584
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000163823	processed_transcript		5	1	108065757	816
ENSMUSG00000022543	transcribed_unitary_pseudogene	4930451G09Rik	ENSMUST00000231040	processed_transcript		16	1	4964382	475
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000208564	nonsense_mediated_decay		7	-1	84263775	678
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000163195	processed_transcript		5	1	108072915	706
ENSMUSG00000022543	transcribed_unitary_pseudogene	4930451G09Rik	ENSMUST00000231077	processed_transcript		16	1	4964477	495
ENSMUSG00000001123	protein_coding	Lgals9	ENSMUST00000108269	protein_coding	principal3	11	-1	78984924	1586
ENSMUSG00000108481	sense_intronic	Gm33248	ENSMUST00000206954	sense_intronic		7	1	129667405	486
ENSMUSG00000020573	protein_coding	Pik3cg	ENSMUST00000218848	retained_intron		12	-1	32178454	2803
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000198662	processed_transcript		5	1	108078165	2675
ENSMUSG00000102933	unprocessed_pseudogene	Gm9116	ENSMUST00000192400	unprocessed_pseudogene		3	1	93909825	1018
ENSMUSG00000002588	protein_coding	Pon1	ENSMUST00000002663	protein_coding	principal1	6	-1	5193946	1513
ENSMUSG00000022543	transcribed_unitary_pseudogene	4930451G09Rik	ENSMUST00000229669	transcribed_unitary_pseudogene		16	1	4965538	1460
ENSMUSG00000108481	sense_intronic	Gm33248	ENSMUST00000205836	sense_intronic		7	1	129667425	617
ENSMUSG00000020573	protein_coding	Pik3cg	ENSMUST00000217915	protein_coding		12	-1	32205986	3340
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000137996	protein_coding		5	1	108086996	718
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000207459	retained_intron		7	-1	84275871	713
ENSMUSG00000102769	unprocessed_pseudogene	Gm37185	ENSMUST00000193852	unprocessed_pseudogene		3	1	93912843	410
ENSMUSG00000022543	transcribed_unitary_pseudogene	4930451G09Rik	ENSMUST00000229605	retained_intron		16	1	4966255	624
ENSMUSG00000020573	protein_coding	Pik3cg	ENSMUST00000126814	retained_intron		12	-1	32201009	350
ENSMUSG00000029267	protein_coding	Mtf2	ENSMUST00000129921	nonsense_mediated_decay		5	1	108092105	582
ENSMUSG00000116000	lincRNA	Gm49497	ENSMUST00000229129	lincRNA		15	1	61184151	680
ENSMUSG00000002588	protein_coding	Pon1	ENSMUST00000177159	protein_coding		6	-1	5193784	805
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000208129	nonsense_mediated_decay		7	-1	84310978	824
ENSMUSG00000031551	protein_coding	Ido1	ENSMUST00000110667	protein_coding		8	-1	24595666	1656
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000208936	processed_transcript		7	-1	84282394	293
ENSMUSG00000002588	protein_coding	Pon1	ENSMUST00000176945	protein_coding		6	-1	5193784	619
ENSMUSG00000027297	protein_coding	Ltk	ENSMUST00000082130	protein_coding	alternative2	2	-1	119760295	2767
ENSMUSG00000076652	IG_V_gene	Ighv7-3	ENSMUST00000103461	IG_V_gene	principal1	12	-1	114153644	361
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000021173	protein_coding	principal1	11	1	116853820	3298
ENSMUSG00000002588	protein_coding	Pon1	ENSMUST00000176933	retained_intron		6	-1	5193763	1544
ENSMUSG00000095822	protein_coding	Gm9117	ENSMUST00000193529	protein_coding	principal1	3	-1	93943543	2325
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000207759	processed_transcript		7	-1	84311181	196
ENSMUSG00000095822	protein_coding	Gm9117	ENSMUST00000177735	protein_coding	principal1	3	-1	93938771	1098
ENSMUSG00000113214	lincRNA	Gm48010	ENSMUST00000223139	lincRNA		13	-1	4466566	441
ENSMUSG00000102788	TEC	Gm38255	ENSMUST00000194910	TEC		1	-1	110960826	2996
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000208204	nonsense_mediated_decay		7	-1	84409883	726
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000151944	retained_intron		11	1	116853829	419
ENSMUSG00000009621	protein_coding	Vav2	ENSMUST00000185188	nonsense_mediated_decay		2	-1	27426912	5098
ENSMUSG00000095148	protein_coding	Gm20873	ENSMUST00000187857	protein_coding	principal1	Y	1	6267098	1342
ENSMUSG00000095148	protein_coding	Gm20873	ENSMUST00000179410	protein_coding	principal1	Y	1	6268725	699
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000106365	nonsense_mediated_decay		11	1	116853895	2952
ENSMUSG00000101707	unprocessed_pseudogene	Gm28916	ENSMUST00000186988	unprocessed_pseudogene		Y	1	6305733	699
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000208995	protein_coding		7	-1	84409963	919
ENSMUSG00000031551	protein_coding	Ido1	ENSMUST00000033956	protein_coding	principal1	8	-1	24597009	1560
ENSMUSG00000100275	unprocessed_pseudogene	Gm28915	ENSMUST00000189145	unprocessed_pseudogene		Y	-1	6369572	699
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000207769	protein_coding		7	-1	84410176	792
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000106363	nonsense_mediated_decay		11	1	116854026	1602
ENSMUSG00000100472	unprocessed_pseudogene	Gm28918	ENSMUST00000188822	unprocessed_pseudogene		Y	-1	6454854	699
ENSMUSG00000027297	protein_coding	Ltk	ENSMUST00000127470	retained_intron		2	-1	119758521	2234
ENSMUSG00000081713	unprocessed_pseudogene	Gm12170	ENSMUST00000119281	unprocessed_pseudogene		11	-1	46540081	300
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000208392	protein_coding		7	-1	84372495	403
ENSMUSG00000022283	protein_coding	Pabpc1	ENSMUST00000001809	protein_coding	principal1	15	-1	36608973	2817
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000153084	protein_coding		11	1	116854078	1194
ENSMUSG00000117686	processed_pseudogene	Gm50122	ENSMUST00000236273	processed_pseudogene		18	1	37919818	318
ENSMUSG00000015709	protein_coding	Arnt2	ENSMUST00000208863	protein_coding		7	-1	84372658	419
ENSMUSG00000020109	protein_coding	Dnajb12	ENSMUST00000146590	protein_coding	principal2	10	1	59879575	3070
ENSMUSG00000086981	lincRNA	Gm12171	ENSMUST00000150895	lincRNA		11	1	46544209	1257
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000147404	retained_intron		11	1	116859141	541
ENSMUSG00000086981	lincRNA	Gm12171	ENSMUST00000169764	lincRNA		11	1	46548413	327
ENSMUSG00000109341	antisense	Gm30873	ENSMUST00000207512	antisense		7	1	84338095	1222
ENSMUSG00000020818	protein_coding	Mfsd11	ENSMUST00000134106	processed_transcript		11	1	116868368	568
ENSMUSG00000082749	processed_pseudogene	Rpl9-ps2	ENSMUST00000120821	processed_pseudogene		11	1	46562031	577
ENSMUSG00000022283	protein_coding	Pabpc1	ENSMUST00000155116	protein_coding		15	-1	36598019	593
ENSMUSG00000086052	antisense	Gm11802	ENSMUST00000137749	antisense		4	1	6688169	653
ENSMUSG00000009621	protein_coding	Vav2	ENSMUST00000056176	protein_coding	principal1	2	-1	27427033	5221
ENSMUSG00000022283	protein_coding	Pabpc1	ENSMUST00000142357	retained_intron		15	-1	36597426	632
ENSMUSG00000027297	protein_coding	Ltk	ENSMUST00000028759	protein_coding	principal4	2	-1	119760431	3080
ENSMUSG00000020109	protein_coding	Dnajb12	ENSMUST00000147914	protein_coding	alternative2	10	1	59879556	3041
ENSMUSG00000056962	protein_coding	Jmjd6	ENSMUST00000141735	retained_intron		11	-1	116843281	2072
ENSMUSG00000022283	protein_coding	Pabpc1	ENSMUST00000146577	retained_intron		15	-1	36598312	725
ENSMUSG00000022283	protein_coding	Pabpc1	ENSMUST00000147116	retained_intron		15	-1	36597736	866
ENSMUSG00000020109	protein_coding	Dnajb12	ENSMUST00000131810	nonsense_mediated_decay		10	1	59879564	1647
ENSMUSG00000061536	protein_coding	Sec22c	ENSMUST00000078547	protein_coding	principal1	9	-1	121704959	5713
ENSMUSG00000047216	protein_coding	Cdh19	ENSMUST00000094626	protein_coding	principal1	1	-1	110977363	3914
ENSMUSG00000020109	protein_coding	Dnajb12	ENSMUST00000142819	protein_coding	principal2	10	1	59879618	1495
ENSMUSG00000027297	protein_coding	Ltk	ENSMUST00000134295	retained_intron		2	-1	119758519	2299
ENSMUSG00000063406	protein_coding	Tmed5	ENSMUST00000118036	protein_coding		5	-1	108132565	1045
ENSMUSG00000022283	protein_coding	Pabpc1	ENSMUST00000156793	processed_transcript		15	-1	36602346	747
ENSMUSG00000063406	protein_coding	Tmed5	ENSMUST00000061203	protein_coding		5	-1	108132583	2194
ENSMUSG00000020109	protein_coding	Dnajb12	ENSMUST00000020309	protein_coding	principal2	10	1	59879626	2238
ENSMUSG00000047216	protein_coding	Cdh19	ENSMUST00000187555	processed_transcript		1	-1	110977584	787
ENSMUSG00000022283	protein_coding	Pabpc1	ENSMUST00000226830	retained_intron		15	-1	36599762	648
ENSMUSG00000102160	TEC	Gm36944	ENSMUST00000192257	TEC		1	-1	110967437	2759
ENSMUSG00000022283	protein_coding	Pabpc1	ENSMUST00000226867	retained_intron		15	-1	36605466	847
ENSMUSG00000061536	protein_coding	Sec22c	ENSMUST00000111560	protein_coding	principal1	9	-1	121705029	2669
ENSMUSG00000009621	protein_coding	Vav2	ENSMUST00000149758	processed_transcript		2	-1	27277341	1027
ENSMUSG00000009621	protein_coding	Vav2	ENSMUST00000148067	processed_transcript		2	-1	27278879	848
ENSMUSG00000022283	protein_coding	Pabpc1	ENSMUST00000146327	retained_intron		15	-1	36608973	2916
ENSMUSG00000009621	protein_coding	Vav2	ENSMUST00000146843	processed_transcript		2	-1	27271798	659
ENSMUSG00000001663	protein_coding	Gstt1	ENSMUST00000001713	protein_coding	principal1	10	-1	75798584	1037
ENSMUSG00000009621	protein_coding	Vav2	ENSMUST00000135584	processed_transcript		2	-1	27271875	276
ENSMUSG00000027297	protein_coding	Ltk	ENSMUST00000182203	protein_coding	alternative2	2	-1	119758525	2232
ENSMUSG00000108576	lincRNA	Gm44778	ENSMUST00000206447	lincRNA		7	1	129833046	668
ENSMUSG00000061536	protein_coding	Sec22c	ENSMUST00000139193	nonsense_mediated_decay		9	-1	121704979	938
ENSMUSG00000076501	IG_V_gene	Igkv2-137	ENSMUST00000103302	IG_V_gene	principal1	6	1	67555497	501
ENSMUSG00000009621	protein_coding	Vav2	ENSMUST00000132642	processed_transcript		2	-1	27344480	541
ENSMUSG00000001663	protein_coding	Gstt1	ENSMUST00000120177	protein_coding		10	-1	75797569	1105
ENSMUSG00000022283	protein_coding	Pabpc1	ENSMUST00000226496	protein_coding		15	-1	36609668	780
ENSMUSG00000061536	protein_coding	Sec22c	ENSMUST00000215056	protein_coding		9	-1	121693042	707
ENSMUSG00000086669	antisense	AA645442	ENSMUST00000156020	antisense		2	1	27326704	285
ENSMUSG00000091193	lincRNA	Gm17333	ENSMUST00000169531	lincRNA		16	1	77846604	531
ENSMUSG00000001663	protein_coding	Gstt1	ENSMUST00000139724	protein_coding		10	-1	75797731	468
ENSMUSG00000116886	processed_pseudogene	Gm49589	ENSMUST00000232575	processed_pseudogene		16	1	77993014	142
ENSMUSG00000061536	protein_coding	Sec22c	ENSMUST00000132733	retained_intron		9	-1	121690473	358
ENSMUSG00000108504	lincRNA	Gm4265	ENSMUST00000206701	lincRNA		7	1	129962165	674
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000112185	protein_coding		5	-1	114773495	5032
ENSMUSG00000051397	protein_coding	Tacstd2	ENSMUST00000058178	protein_coding	principal1	6	-1	67535796	1735
ENSMUSG00000063406	protein_coding	Tmed5	ENSMUST00000002837	protein_coding	principal1	5	-1	108132620	3800
ENSMUSG00000061536	protein_coding	Sec22c	ENSMUST00000154978	protein_coding		9	-1	121705490	420
ENSMUSG00000101253	lincRNA	Gm29088	ENSMUST00000189363	lincRNA		1	-1	111446645	581
ENSMUSG00000101846	processed_pseudogene	Gm19927	ENSMUST00000185792	processed_pseudogene		1	1	111385918	781
ENSMUSG00000058927	protein_coding	Gm10053	ENSMUST00000073080	protein_coding	principal1	19	1	24875686	946
ENSMUSG00000061536	protein_coding	Sec22c	ENSMUST00000214595	processed_transcript		9	-1	121705465	374
ENSMUSG00000105650	lincRNA	Gm42889	ENSMUST00000199480	lincRNA		6	1	67532489	660
ENSMUSG00000063406	protein_coding	Tmed5	ENSMUST00000119437	protein_coding		5	-1	108132549	3436
ENSMUSG00000064262	protein_coding	Gimap8	ENSMUST00000203083	protein_coding	principal1	6	1	48647234	2579
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000136757	protein_coding	principal1	7	-1	97579497	789
ENSMUSG00000063406	protein_coding	Tmed5	ENSMUST00000117759	protein_coding		5	-1	108132533	482
ENSMUSG00000024340	protein_coding	Btnl2	ENSMUST00000025198	protein_coding	principal2	17	1	34354822	2566
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000146044	protein_coding		5	-1	114743868	3707
ENSMUSG00000103843	antisense	Gm31266	ENSMUST00000192060	antisense		3	-1	41563698	656
ENSMUSG00000064262	protein_coding	Gimap8	ENSMUST00000078223	protein_coding		6	1	48647361	3160
ENSMUSG00000063406	protein_coding	Tmed5	ENSMUST00000119784	protein_coding		5	-1	108132530	689
ENSMUSG00000024340	protein_coding	Btnl2	ENSMUST00000178562	protein_coding	alternative2	17	1	34354822	2563
ENSMUSG00000102445	unprocessed_pseudogene	Gm37104	ENSMUST00000193278	unprocessed_pseudogene		3	1	93958071	196
ENSMUSG00000006435	protein_coding	Neurl1a	ENSMUST00000111808	protein_coding	principal3	19	1	47178820	4158
ENSMUSG00000064262	protein_coding	Gimap8	ENSMUST00000203509	protein_coding	principal1	6	1	48647384	3138
ENSMUSG00000020940	protein_coding	Efcab15	ENSMUST00000021323	protein_coding	principal2	11	-1	103208548	1199
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000028052	protein_coding		1	-1	160351571	6338
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000078332	protein_coding	principal1	1	1	82724890	1894
ENSMUSG00000117941	lincRNA	Gm50276	ENSMUST00000235246	lincRNA		19	-1	17240669	805
ENSMUSG00000006435	protein_coding	Neurl1a	ENSMUST00000235326	protein_coding		19	1	47179022	4034
ENSMUSG00000056962	protein_coding	Jmjd6	ENSMUST00000047616	protein_coding	principal1	11	-1	116843449	1668
ENSMUSG00000108117	processed_pseudogene	Gm44262	ENSMUST00000204969	processed_pseudogene		6	-1	48665860	372
ENSMUSG00000006435	protein_coding	Neurl1a	ENSMUST00000235290	protein_coding		19	1	47179151	1060
ENSMUSG00000118367	lincRNA	Gm50277	ENSMUST00000236272	lincRNA		19	-1	17256488	1670
ENSMUSG00000118367	lincRNA	Gm50277	ENSMUST00000235384	lincRNA		19	-1	17256488	636
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000192019	retained_intron		1	-1	160231867	713
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000161572	processed_transcript		1	1	82724918	586
ENSMUSG00000056962	protein_coding	Jmjd6	ENSMUST00000130120	retained_intron		11	-1	116843290	4538
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000191909	protein_coding		1	-1	160251443	690
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000193185	protein_coding		1	-1	160307339	702
ENSMUSG00000056962	protein_coding	Jmjd6	ENSMUST00000142495	nonsense_mediated_decay		11	-1	116843355	1437
ENSMUSG00000006435	protein_coding	Neurl1a	ENSMUST00000111807	protein_coding	alternative1	19	1	47228911	3606
ENSMUSG00000079138	processed_pseudogene	Gm8818	ENSMUST00000110797	processed_pseudogene		1	1	153305432	1047
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000002456	protein_coding	principal3	12	1	10369973	1849
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000112183	protein_coding		5	-1	114773434	4886
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000073025	protein_coding		1	1	82724919	1706
ENSMUSG00000118029	TEC	AC132288.1	ENSMUST00000237690	TEC		19	1	47252243	2090
ENSMUSG00000020940	protein_coding	Efcab15	ENSMUST00000172850	nonsense_mediated_decay		11	-1	103208522	779
ENSMUSG00000020940	protein_coding	Efcab15	ENSMUST00000174567	protein_coding		11	-1	103208523	643
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000072725	protein_coding		7	-1	97579479	776
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000147323	nonsense_mediated_decay		12	1	10369973	1942
ENSMUSG00000056962	protein_coding	Jmjd6	ENSMUST00000124831	protein_coding		11	-1	116841251	838
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000219826	protein_coding	alternative2	12	1	10369973	2023
ENSMUSG00000032526	protein_coding	Ss18l2	ENSMUST00000035113	protein_coding	principal1	9	1	121710329	577
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000161648	protein_coding		1	1	82724925	1715
ENSMUSG00000118127	antisense	Gm36693	ENSMUST00000236668	antisense		19	-1	47202032	1600
ENSMUSG00000056962	protein_coding	Jmjd6	ENSMUST00000140349	nonsense_mediated_decay		11	-1	116842705	1201
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000043283	protein_coding		5	-1	114773492	4938
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000162056	retained_intron		1	1	82724934	1961
ENSMUSG00000004846	protein_coding	Plod3	ENSMUST00000004968	protein_coding	principal1	5	1	136987019	3280
ENSMUSG00000117659	antisense	Gm50339	ENSMUST00000236562	antisense		19	-1	47221909	459
ENSMUSG00000020940	protein_coding	Efcab15	ENSMUST00000140559	retained_intron		11	-1	103208548	594
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000126085	nonsense_mediated_decay		7	-1	97579398	949
ENSMUSG00000032526	protein_coding	Ss18l2	ENSMUST00000215966	protein_coding		9	1	121710346	2316
ENSMUSG00000056962	protein_coding	Jmjd6	ENSMUST00000140513	nonsense_mediated_decay		11	-1	116842720	1196
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000160786	protein_coding		1	1	82724940	1645
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000217944	protein_coding	alternative2	12	1	10369973	1975
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000219292	nonsense_mediated_decay		12	1	10369973	1719
ENSMUSG00000020940	protein_coding	Efcab15	ENSMUST00000107026	protein_coding	alternative2	11	-1	103208558	1127
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000154853	protein_coding		7	-1	97579496	883
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000194824	processed_transcript		1	-1	160287338	514
ENSMUSG00000032526	protein_coding	Ss18l2	ENSMUST00000214535	retained_intron		9	1	121710365	1175
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000086564	protein_coding	principal1	5	-1	114773462	2984
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000218339	protein_coding	alternative2	12	1	10369973	1843
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000140805	processed_transcript		7	-1	97579486	516
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000218327	nonsense_mediated_decay		12	1	10369973	1670
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000194623	retained_intron		1	-1	160247998	700
ENSMUSG00000042719	protein_coding	Naa25	ENSMUST00000042163	protein_coding	principal1	5	1	121397936	5447
ENSMUSG00000032526	protein_coding	Ss18l2	ENSMUST00000215833	protein_coding		9	1	121710372	479
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000218287	nonsense_mediated_decay		12	1	10369973	1898
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000218551	nonsense_mediated_decay		12	1	10369973	1747
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000124552	protein_coding		7	-1	97579497	618
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000162003	protein_coding		1	1	82724948	2087
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000222237	protein_coding	principal4	12	-1	70113717	9919
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000218026	nonsense_mediated_decay		12	1	10369973	1944
ENSMUSG00000032526	protein_coding	Ss18l2	ENSMUST00000213768	retained_intron		9	1	121710385	443
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000220257	nonsense_mediated_decay		12	1	10369973	2026
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000160972	protein_coding		1	1	82729229	1358
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000155908	protein_coding		5	-1	114773495	2338
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000219049	nonsense_mediated_decay		12	1	10369973	1817
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000220611	nonsense_mediated_decay		12	1	10369973	1900
ENSMUSG00000032526	protein_coding	Ss18l2	ENSMUST00000215104	protein_coding		9	1	121710400	315
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000135793	processed_transcript		5	-1	114734166	472
ENSMUSG00000032526	protein_coding	Ss18l2	ENSMUST00000217579	retained_intron		9	1	121710467	2354
ENSMUSG00000041272	protein_coding	Tox	ENSMUST00000039987	protein_coding	principal1	4	-1	6990799	3961
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000160750	protein_coding		1	1	82729272	659
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000130925	protein_coding		5	-1	114748269	753
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000201442	retained_intron		5	-1	114741362	3033
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000118657	protein_coding	alternative2	12	1	10369979	1792
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000144858	protein_coding		7	-1	97579441	380
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000159279	protein_coding		1	1	82729326	440
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000223534	protein_coding	alternative2	12	1	10369979	1798
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000160044	protein_coding		1	1	82729326	435
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000218417	nonsense_mediated_decay		12	1	10369994	1829
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000221579	protein_coding		12	-1	70026827	521
ENSMUSG00000044787	protein_coding	Spata32	ENSMUST00000103076	protein_coding	principal1	11	-1	103218432	1112
ENSMUSG00000041272	protein_coding	Tox	ENSMUST00000125974	processed_transcript		4	-1	6689351	773
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000218288	protein_coding		12	1	10372873	1528
ENSMUSG00000034120	protein_coding	Srsf2	ENSMUST00000092404	protein_coding	principal1	11	-1	116853094	1899
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000160744	protein_coding		1	1	82735470	856
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000138060	protein_coding		7	-1	97579482	467
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000219630	protein_coding		12	1	10374787	1334
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000235109	protein_coding		1	-1	160441904	594
ENSMUSG00000020622	protein_coding	Nt5c1b	ENSMUST00000218148	retained_intron		12	1	10375053	1344
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000193729	processed_transcript		1	-1	160250758	2777
ENSMUSG00000110082	processed_pseudogene	Gm19201	ENSMUST00000210127	processed_pseudogene		7	-1	12183245	778
ENSMUSG00000049321	protein_coding	Zfp2	ENSMUST00000109129	protein_coding	principal1	11	-1	50910810	2803
ENSMUSG00000034120	protein_coding	Srsf2	ENSMUST00000138484	retained_intron		11	-1	116852219	1814
ENSMUSG00000041272	protein_coding	Tox	ENSMUST00000147657	retained_intron		4	-1	6991557	1959
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000160632	retained_intron		1	1	82741639	651
ENSMUSG00000017802	protein_coding	Retreg3	ENSMUST00000154513	processed_transcript		11	-1	101119893	3229
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000188333	retained_intron		1	1	82741978	3918
ENSMUSG00000041272	protein_coding	Tox	ENSMUST00000150082	retained_intron		4	-1	6990483	2614
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000154779	nonsense_mediated_decay		7	-1	97579442	709
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000095666	protein_coding	alternative2	12	-1	70112035	7183
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000162794	retained_intron		1	1	82746923	607
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000146605	protein_coding		7	-1	97579474	642
ENSMUSG00000046974	protein_coding	BC053393	ENSMUST00000050937	protein_coding	principal1	11	1	46571536	2020
ENSMUSG00000100289	unprocessed_pseudogene	Gm28917	ENSMUST00000187294	unprocessed_pseudogene		Y	-1	6577051	237
ENSMUSG00000034120	protein_coding	Srsf2	ENSMUST00000176834	nonsense_mediated_decay		11	-1	116852086	620
ENSMUSG00000029782	protein_coding	Tmem209	ENSMUST00000151187	nonsense_mediated_decay		6	-1	30509704	3998
ENSMUSG00000026150	protein_coding	Mff	ENSMUST00000162573	retained_intron		1	1	82748389	2360
ENSMUSG00000117946	processed_pseudogene	Gm50280	ENSMUST00000237419	processed_pseudogene		19	-1	17266338	355
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000135998	protein_coding		7	-1	97579419	651
ENSMUSG00000107881	TEC	Gm44250	ENSMUST00000203092	TEC		6	-1	5220486	4229
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000220689	protein_coding	alternative2	12	-1	70111629	4723
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000151840	protein_coding		7	-1	97579382	483
ENSMUSG00000034120	protein_coding	Srsf2	ENSMUST00000136914	nonsense_mediated_decay		11	-1	116853072	1336
ENSMUSG00000079465	protein_coding	Col4a3	ENSMUST00000141994	retained_intron		1	1	82586921	1926
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000153756	retained_intron		5	-1	114773495	2091
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000205430	retained_intron		7	-1	97578227	2328
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000131993	protein_coding		5	-1	114766523	746
ENSMUSG00000034120	protein_coding	Srsf2	ENSMUST00000177429	processed_transcript		11	-1	116851571	433
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000178078	protein_coding		7	-1	97575653	723
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000191941	nonsense_mediated_decay		1	-1	160309171	1718
ENSMUSG00000035642	protein_coding	Aamdc	ENSMUST00000042627	protein_coding		7	-1	97575653	627
ENSMUSG00000034120	protein_coding	Srsf2	ENSMUST00000190993	protein_coding	principal1	11	-1	116853072	1326
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000202581	retained_intron		5	-1	114761691	7440
ENSMUSG00000049321	protein_coding	Zfp2	ENSMUST00000116378	protein_coding	principal1	11	-1	50916142	3069
ENSMUSG00000101243	protein_coding	Gm28919	ENSMUST00000190026	protein_coding	principal1	Y	1	6583546	920
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000131016	protein_coding		5	-1	114775517	693
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000191651	protein_coding		1	-1	160441867	643
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000131582	processed_transcript		5	-1	114773495	398
ENSMUSG00000004846	protein_coding	Plod3	ENSMUST00000129896	retained_intron		5	1	136987378	2362
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000144191	processed_transcript		5	-1	114767153	296
ENSMUSG00000064193	processed_pseudogene	Gm4735	ENSMUST00000138679	processed_pseudogene		2	1	80837141	1302
ENSMUSG00000024771	protein_coding	Lipk	ENSMUST00000225505	protein_coding	alternative2	19	1	34008290	2083
ENSMUSG00000079806	protein_coding	Gm21719	ENSMUST00000189073	protein_coding	principal1	Y	-1	6682872	1358
ENSMUSG00000103121	IG_V_pseudogene	Ighv15-1	ENSMUST00000194450	IG_V_pseudogene		12	-1	114158315	276
ENSMUSG00000079806	protein_coding	Gm21719	ENSMUST00000115940	protein_coding	principal1	Y	-1	6681243	693
ENSMUSG00000100479	processed_pseudogene	Gm28921	ENSMUST00000190219	processed_pseudogene		Y	-1	6694455	378
ENSMUSG00000049321	protein_coding	Zfp2	ENSMUST00000109128	protein_coding	principal1	11	-1	50916165	2782
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000133096	retained_intron		5	-1	114773467	1284
ENSMUSG00000099352	unprocessed_pseudogene	Gm28920	ENSMUST00000189957	unprocessed_pseudogene		Y	-1	6718238	699
ENSMUSG00000041890	protein_coding	Git2	ENSMUST00000178440	protein_coding		5	-1	114773492	4944
ENSMUSG00000101388	lincRNA	Gm28444	ENSMUST00000190777	lincRNA		Y	-1	6727474	2137
ENSMUSG00000004846	protein_coding	Plod3	ENSMUST00000144784	retained_intron		5	1	136987476	2843
ENSMUSG00000083023	processed_pseudogene	Gm11804	ENSMUST00000121663	processed_pseudogene		4	-1	7039514	468
ENSMUSG00000004846	protein_coding	Plod3	ENSMUST00000151642	retained_intron		5	1	136990306	932
ENSMUSG00000024771	protein_coding	Lipk	ENSMUST00000054260	protein_coding	principal2	19	1	34008301	2125
ENSMUSG00000004846	protein_coding	Plod3	ENSMUST00000137419	retained_intron		5	1	136990502	842
ENSMUSG00000049321	protein_coding	Zfp2	ENSMUST00000150903	processed_transcript		11	-1	50916131	501
ENSMUSG00000004846	protein_coding	Plod3	ENSMUST00000127100	protein_coding		5	1	136991624	600
ENSMUSG00000101055	unprocessed_pseudogene	Gm28443	ENSMUST00000189081	unprocessed_pseudogene		Y	-1	6870842	698
ENSMUSG00000019808	protein_coding	Adat2	ENSMUST00000019944	protein_coding	principal1	10	1	13552894	1466
ENSMUSG00000008140	protein_coding	Emc10	ENSMUST00000118808	protein_coding	alternative2	7	-1	44496529	1872
ENSMUSG00000013419	protein_coding	Zfp651	ENSMUST00000214732	nonsense_mediated_decay		9	1	121759330	2136
ENSMUSG00000024771	protein_coding	Lipk	ENSMUST00000224738	nonsense_mediated_decay		19	1	34008349	2090
ENSMUSG00000049321	protein_coding	Zfp2	ENSMUST00000124748	processed_transcript		11	-1	50916152	1407
ENSMUSG00000008140	protein_coding	Emc10	ENSMUST00000118515	protein_coding	alternative2	7	-1	44496406	1662
ENSMUSG00000029636	protein_coding	Wasf3	ENSMUST00000016143	protein_coding	principal1	5	1	146384985	5196
ENSMUSG00000049321	protein_coding	Zfp2	ENSMUST00000151027	processed_transcript		11	-1	50916134	539
ENSMUSG00000104819	processed_pseudogene	4930515G16Rik	ENSMUST00000199440	processed_pseudogene		6	-1	67566446	1256
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000030984	protein_coding	principal3	5	1	34949445	5472
ENSMUSG00000008140	protein_coding	Emc10	ENSMUST00000147102	retained_intron		7	-1	44492018	429
ENSMUSG00000029636	protein_coding	Wasf3	ENSMUST00000238592	protein_coding		5	1	146455609	532
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000221486	retained_intron		12	-1	70112027	5655
ENSMUSG00000104931	IG_V_pseudogene	Igkv1-136	ENSMUST00000200635	IG_V_pseudogene		6	1	67594012	297
ENSMUSG00000008140	protein_coding	Emc10	ENSMUST00000150342	retained_intron		7	-1	44496463	992
ENSMUSG00000090266	protein_coding	Mettl23	ENSMUST00000106370	protein_coding	principal1	11	1	116843278	1276
ENSMUSG00000051490	protein_coding	Foxd4	ENSMUST00000058600	protein_coding	principal1	19	-1	24901197	1962
ENSMUSG00000118302	processed_pseudogene	Gm31300	ENSMUST00000237141	processed_pseudogene		19	-1	34056475	336
ENSMUSG00000008140	protein_coding	Emc10	ENSMUST00000138328	protein_coding		7	-1	44496428	701
ENSMUSG00000042719	protein_coding	Naa25	ENSMUST00000173895	nonsense_mediated_decay		5	1	121397994	2556
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000128161	retained_intron		5	1	34949448	2951
ENSMUSG00000013419	protein_coding	Zfp651	ENSMUST00000093772	protein_coding	principal1	9	1	121760033	6353
ENSMUSG00000041949	protein_coding	Tango6	ENSMUST00000048359	protein_coding	principal1	8	1	106683068	4409
ENSMUSG00000008140	protein_coding	Emc10	ENSMUST00000123928	retained_intron		7	-1	44496397	749
ENSMUSG00000111934	TEC	Gm48123	ENSMUST00000218448	TEC		10	1	49788827	1341
ENSMUSG00000042719	protein_coding	Naa25	ENSMUST00000131598	retained_intron		5	1	121397995	4143
ENSMUSG00000013419	protein_coding	Zfp651	ENSMUST00000215081	retained_intron		9	1	121764017	697
ENSMUSG00000110832	TEC	Gm48125	ENSMUST00000215798	TEC		10	1	49799325	1755
ENSMUSG00000048677	protein_coding	Tpcn2	ENSMUST00000208328	nonsense_mediated_decay		7	-1	145283931	2134
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000223257	protein_coding	alternative2	12	-1	70111920	6744
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000087684	protein_coding	alternative2	5	1	34964773	4713
ENSMUSG00000008140	protein_coding	Emc10	ENSMUST00000239015	protein_coding	principal2	7	-1	44496513	1855
ENSMUSG00000042719	protein_coding	Naa25	ENSMUST00000151458	nonsense_mediated_decay		5	1	121398005	2910
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000223048	retained_intron		12	-1	70030893	656
ENSMUSG00000090266	protein_coding	Mettl23	ENSMUST00000175930	retained_intron		11	1	116843555	1785
ENSMUSG00000013419	protein_coding	Zfp651	ENSMUST00000213743	retained_intron		9	1	121767082	1862
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000222137	retained_intron		12	-1	70028819	1650
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000202915	processed_transcript		5	1	34973817	338
ENSMUSG00000020108	protein_coding	Ddit4	ENSMUST00000020308	protein_coding	principal1	10	-1	59951834	1755
ENSMUSG00000041949	protein_coding	Tango6	ENSMUST00000212764	retained_intron		8	1	106683115	4005
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000153972	processed_transcript		5	1	34974992	372
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000223469	processed_transcript		12	-1	70035251	488
ENSMUSG00000024456	protein_coding	Diaph1	ENSMUST00000115634	protein_coding	principal3	18	-1	37935476	5666
ENSMUSG00000041949	protein_coding	Tango6	ENSMUST00000211979	protein_coding		8	1	106683146	2722
ENSMUSG00000090266	protein_coding	Mettl23	ENSMUST00000128784	retained_intron		11	1	116843561	585
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000222835	protein_coding		12	-1	70111977	3181
ENSMUSG00000042719	protein_coding	Naa25	ENSMUST00000172908	nonsense_mediated_decay		5	1	121439418	757
ENSMUSG00000090266	protein_coding	Mettl23	ENSMUST00000176765	retained_intron		11	1	116843585	427
ENSMUSG00000026478	protein_coding	Lamc1	ENSMUST00000027752	protein_coding	principal1	1	-1	153332786	7622
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000156339	protein_coding		5	1	34989128	838
ENSMUSG00000024456	protein_coding	Diaph1	ENSMUST00000025337	protein_coding	alternative2	18	-1	37935381	5596
ENSMUSG00000042719	protein_coding	Naa25	ENSMUST00000174322	processed_transcript		5	1	121440003	452
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000223316	retained_intron		12	-1	70051284	2490
ENSMUSG00000090266	protein_coding	Mettl23	ENSMUST00000176799	retained_intron		11	1	116843673	847
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000221141	retained_intron		12	-1	70103360	1397
ENSMUSG00000024456	protein_coding	Diaph1	ENSMUST00000115631	protein_coding	alternative2	18	-1	37935423	5741
ENSMUSG00000105406	processed_pseudogene	Gm43247	ENSMUST00000198638	processed_pseudogene		5	1	113060513	481
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000221275	protein_coding		12	-1	70112027	729
ENSMUSG00000000938	protein_coding	Hoxa10	ENSMUST00000125581	protein_coding	principal3	6	-1	52234939	2565
ENSMUSG00000026478	protein_coding	Lamc1	ENSMUST00000159251	retained_intron		1	-1	153250461	924
ENSMUSG00000096336	IG_V_gene	Igkv1-135	ENSMUST00000103303	IG_V_gene	principal1	6	1	67609713	394
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000222466	processed_transcript		12	-1	70111571	846
ENSMUSG00000090266	protein_coding	Mettl23	ENSMUST00000132593	nonsense_mediated_decay		11	1	116843675	329
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000239242	protein_coding		12	-1	70090617	342
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000114284	protein_coding	alternative2	5	1	34989384	3624
ENSMUSG00000026478	protein_coding	Lamc1	ENSMUST00000163011	nonsense_mediated_decay		1	-1	153239326	762
ENSMUSG00000024456	protein_coding	Diaph1	ENSMUST00000127346	processed_transcript		18	-1	37853407	584
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000085314	protein_coding	principal4	12	-1	70102854	9675
ENSMUSG00000090266	protein_coding	Mettl23	ENSMUST00000140869	nonsense_mediated_decay		11	1	116843675	541
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000114285	protein_coding	alternative2	5	1	34989549	2924
ENSMUSG00000024456	protein_coding	Diaph1	ENSMUST00000124822	retained_intron		18	-1	37856144	551
ENSMUSG00000026478	protein_coding	Lamc1	ENSMUST00000160515	retained_intron		1	-1	153229418	466
ENSMUSG00000000938	protein_coding	Hoxa10	ENSMUST00000126402	processed_transcript		6	-1	52233324	1710
ENSMUSG00000026478	protein_coding	Lamc1	ENSMUST00000161744	protein_coding		1	-1	153229144	1447
ENSMUSG00000024456	protein_coding	Diaph1	ENSMUST00000129688	retained_intron		18	-1	37897942	617
ENSMUSG00000090266	protein_coding	Mettl23	ENSMUST00000143184	protein_coding		11	1	116848901	502
ENSMUSG00000103818	TEC	Gm38009	ENSMUST00000194884	TEC		1	-1	153287190	3341
ENSMUSG00000048677	protein_coding	Tpcn2	ENSMUST00000209047	nonsense_mediated_decay		7	-1	145283922	2505
ENSMUSG00000046314	protein_coding	Stxbp6	ENSMUST00000053768	protein_coding	principal1	12	-1	45074709	4553
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000021468	protein_coding	alternative2	12	-1	70111925	6708
ENSMUSG00000094163	protein_coding	Tdpoz5	ENSMUST00000098879	protein_coding	principal1	3	-1	93961314	1023
ENSMUSG00000024456	protein_coding	Diaph1	ENSMUST00000115629	protein_coding	alternative2	18	-1	37906416	5416
ENSMUSG00000000938	protein_coding	Hoxa10	ENSMUST00000121043	protein_coding	alternative2	6	-1	52240854	1436
ENSMUSG00000103841	unprocessed_pseudogene	Gm37807	ENSMUST00000194310	unprocessed_pseudogene		3	1	93969138	190
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000114281	protein_coding	alternative2	5	1	34999057	3439
ENSMUSG00000021068	protein_coding	Nin	ENSMUST00000169074	protein_coding	alternative2	12	-1	70111920	6636
ENSMUSG00000024456	protein_coding	Diaph1	ENSMUST00000080033	protein_coding	alternative2	18	-1	37935411	4378
ENSMUSG00000102804	unprocessed_pseudogene	Gm37481	ENSMUST00000195176	unprocessed_pseudogene		3	-1	93978114	403
ENSMUSG00000046314	protein_coding	Stxbp6	ENSMUST00000120531	protein_coding	principal1	12	-1	45074112	4209
ENSMUSG00000042240	protein_coding	Crybb2	ENSMUST00000112336	protein_coding	principal1	5	-1	113070117	906
ENSMUSG00000104460	unprocessed_pseudogene	Gm9121	ENSMUST00000193749	unprocessed_pseudogene		3	-1	93981134	1071
ENSMUSG00000118115	processed_pseudogene	Gm4757	ENSMUST00000237198	processed_pseudogene		19	1	37870270	850
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000114280	protein_coding		5	1	34999078	2777
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000114283	protein_coding	alternative2	5	1	34999184	2628
ENSMUSG00000042240	protein_coding	Crybb2	ENSMUST00000199639	processed_transcript		5	-1	113068457	641
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000225237	protein_coding		5	1	35014320	365
ENSMUSG00000000938	protein_coding	Hoxa10	ENSMUST00000142611	processed_transcript		6	-1	52240795	1045
ENSMUSG00000046314	protein_coding	Stxbp6	ENSMUST00000130202	processed_transcript		12	-1	45012964	431
ENSMUSG00000042240	protein_coding	Crybb2	ENSMUST00000137485	processed_transcript		5	-1	113068771	613
ENSMUSG00000111551	processed_pseudogene	Gm48128	ENSMUST00000215393	processed_pseudogene		10	1	49826270	3846
ENSMUSG00000046314	protein_coding	Stxbp6	ENSMUST00000143376	protein_coding		12	-1	45074154	359
ENSMUSG00000017802	protein_coding	Retreg3	ENSMUST00000017946	protein_coding	principal1	11	-1	101119893	3165
ENSMUSG00000102850	TEC	Gm37082	ENSMUST00000192629	TEC		9	-1	32537177	1927
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000141562	retained_intron		5	1	35020113	509
ENSMUSG00000042240	protein_coding	Crybb2	ENSMUST00000144833	processed_transcript		5	-1	113069494	653
ENSMUSG00000102352	TEC	Gm38346	ENSMUST00000192379	TEC		9	-1	32510383	2639
ENSMUSG00000110973	processed_pseudogene	Gm48130	ENSMUST00000213795	processed_pseudogene		10	-1	49955981	322
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000201936	protein_coding		5	1	35022756	554
ENSMUSG00000057982	protein_coding	Zfp809	ENSMUST00000215902	protein_coding		9	1	22225714	1800
ENSMUSG00000103151	TEC	Gm38292	ENSMUST00000192646	TEC		9	-1	32480377	3045
ENSMUSG00000111142	TEC	Gm48131	ENSMUST00000214421	TEC		10	-1	49981881	1848
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000135403	retained_intron		5	1	35022831	412
ENSMUSG00000042240	protein_coding	Crybb2	ENSMUST00000031295	protein_coding	principal1	5	-1	113068766	724
ENSMUSG00000112349	processed_pseudogene	Gm48132	ENSMUST00000219753	processed_pseudogene		10	-1	50182994	3844
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000156819	protein_coding		5	1	35024341	706
ENSMUSG00000057982	protein_coding	Zfp809	ENSMUST00000213350	retained_intron		9	1	22225723	597
ENSMUSG00000046314	protein_coding	Stxbp6	ENSMUST00000139750	nonsense_mediated_decay		12	-1	45074318	535
ENSMUSG00000102153	TEC	Gm37474	ENSMUST00000194812	TEC		9	-1	32526958	1814
ENSMUSG00000017802	protein_coding	Retreg3	ENSMUST00000142733	processed_transcript		11	-1	101119765	1783
ENSMUSG00000046314	protein_coding	Stxbp6	ENSMUST00000218249	retained_intron		12	-1	45074226	443
ENSMUSG00000017802	protein_coding	Retreg3	ENSMUST00000147201	processed_transcript		11	-1	101119893	835
ENSMUSG00000057982	protein_coding	Zfp809	ENSMUST00000213371	nonsense_mediated_decay		9	1	22225723	1766
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000155162	processed_transcript		5	1	35026903	753
ENSMUSG00000086012	sense_intronic	Gm15902	ENSMUST00000146949	sense_intronic		12	-1	44970878	469
ENSMUSG00000029101	protein_coding	Rgs12	ENSMUST00000150139	protein_coding		5	1	35026970	671
ENSMUSG00000086012	sense_intronic	Gm15902	ENSMUST00000219623	sense_intronic		12	-1	44964893	3477
ENSMUSG00000017802	protein_coding	Retreg3	ENSMUST00000107295	protein_coding		11	-1	101119843	3179
ENSMUSG00000057982	protein_coding	Zfp809	ENSMUST00000215618	protein_coding	alternative2	9	1	22225752	1313
ENSMUSG00000081636	processed_pseudogene	Gm15901	ENSMUST00000117663	processed_pseudogene		12	1	44923180	941
ENSMUSG00000100555	processed_pseudogene	Gm8173	ENSMUST00000186797	processed_pseudogene		1	-1	111807775	1977
ENSMUSG00000057982	protein_coding	Zfp809	ENSMUST00000072465	protein_coding	principal2	9	1	22225771	1425
ENSMUSG00000102728	TEC	Gm37934	ENSMUST00000192902	TEC		1	1	111833823	402
ENSMUSG00000052656	protein_coding	Rnf103	ENSMUST00000064637	protein_coding	principal1	6	1	71493894	3264
ENSMUSG00000057982	protein_coding	Zfp809	ENSMUST00000215583	processed_transcript		9	1	22225969	420
ENSMUSG00000111424	TEC	Gm48478	ENSMUST00000213592	TEC		9	1	22228978	2325
ENSMUSG00000052656	protein_coding	Rnf103	ENSMUST00000114178	protein_coding		6	1	71493910	3431
ENSMUSG00000104059	unprocessed_pseudogene	Gm9124	ENSMUST00000191789	unprocessed_pseudogene		3	1	94009931	1092
ENSMUSG00000038702	protein_coding	Dsel	ENSMUST00000186365	processed_transcript		1	-1	111864768	3063
ENSMUSG00000051124	protein_coding	Gimap9	ENSMUST00000054050	protein_coding	principal1	6	1	48676129	1384
ENSMUSG00000052656	protein_coding	Rnf103	ENSMUST00000150069	retained_intron		6	1	71503886	3271
ENSMUSG00000086427	processed_transcript	Hoxa11os	ENSMUST00000156515	antisense		6	1	52244393	2118
ENSMUSG00000051124	protein_coding	Gimap9	ENSMUST00000147936	protein_coding		6	1	48677511	663
ENSMUSG00000052656	protein_coding	Rnf103	ENSMUST00000114179	protein_coding	principal1	6	1	71494003	2671
ENSMUSG00000038702	protein_coding	Dsel	ENSMUST00000035462	protein_coding	principal1	1	-1	111864918	5759
ENSMUSG00000086427	processed_transcript	Hoxa11os	ENSMUST00000134512	antisense		6	1	52245243	1839
ENSMUSG00000038702	protein_coding	Dsel	ENSMUST00000189731	processed_transcript		1	-1	111864883	806
ENSMUSG00000038702	protein_coding	Dsel	ENSMUST00000189370	processed_transcript		1	-1	111864880	622
ENSMUSG00000086427	processed_transcript	Hoxa11os	ENSMUST00000147174	antisense		6	1	52245969	1116
ENSMUSG00000079465	protein_coding	Col4a3	ENSMUST00000113457	protein_coding	principal1	1	1	82586976	8554
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000047910	protein_coding	principal1	10	-1	93889814	4424
ENSMUSG00000018395	protein_coding	Kif3a	ENSMUST00000057330	protein_coding	alternative1	11	1	53567379	2290
ENSMUSG00000086427	processed_transcript	Hoxa11os	ENSMUST00000141850	antisense		6	1	52245989	1065
ENSMUSG00000086427	processed_transcript	Hoxa11os	ENSMUST00000137729	retained_intron		6	1	52246221	885
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000181894	retained_intron		10	-1	93864070	3034
ENSMUSG00000079465	protein_coding	Col4a3	ENSMUST00000125563	nonsense_mediated_decay		1	1	82715304	524
ENSMUSG00000079465	protein_coding	Col4a3	ENSMUST00000152664	protein_coding		1	1	82715304	627
ENSMUSG00000086427	processed_transcript	Hoxa11os	ENSMUST00000154027	antisense		6	1	52248422	829
ENSMUSG00000110102	processed_pseudogene	Gm9132	ENSMUST00000210182	processed_pseudogene		7	1	110302001	832
ENSMUSG00000103712	processed_pseudogene	Gm37659	ENSMUST00000194574	processed_pseudogene		3	1	27012764	111
ENSMUSG00000018395	protein_coding	Kif3a	ENSMUST00000120613	protein_coding	principal3	11	1	53567379	3161
ENSMUSG00000020131	protein_coding	Pcsk4	ENSMUST00000137177	retained_intron		10	-1	80329453	2772
ENSMUSG00000018395	protein_coding	Kif3a	ENSMUST00000173744	protein_coding		11	1	53567397	2257
ENSMUSG00000037393	protein_coding	Nmur2	ENSMUST00000037682	protein_coding	principal1	11	-1	56041010	3302
ENSMUSG00000038210	protein_coding	Hoxa11	ENSMUST00000048026	protein_coding	principal1	6	-1	52245810	2287
ENSMUSG00000018395	protein_coding	Kif3a	ENSMUST00000118353	protein_coding	alternative1	11	1	53567526	2178
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000180840	protein_coding	principal1	10	-1	93891202	2551
ENSMUSG00000086020	antisense	Gm12239	ENSMUST00000134285	antisense		11	1	55772088	500
ENSMUSG00000038843	protein_coding	Gcnt1	ENSMUST00000174236	protein_coding	principal1	19	-1	17356667	4606
ENSMUSG00000048677	protein_coding	Tpcn2	ENSMUST00000058022	protein_coding	principal1	7	-1	145284011	2993
ENSMUSG00000038210	protein_coding	Hoxa11	ENSMUST00000131495	processed_transcript		6	-1	52245795	2098
ENSMUSG00000108278	TEC	Gm44194	ENSMUST00000204222	TEC		6	-1	71541738	3229
ENSMUSG00000018395	protein_coding	Kif3a	ENSMUST00000140359	processed_transcript		11	1	53567716	609
ENSMUSG00000033352	protein_coding	Map2k4	ENSMUST00000046963	protein_coding	principal1	11	-1	65788297	3695
ENSMUSG00000018395	protein_coding	Kif3a	ENSMUST00000132496	protein_coding		11	1	53567861	720
ENSMUSG00000038843	protein_coding	Gcnt1	ENSMUST00000236139	protein_coding	principal1	19	-1	17372844	2046
ENSMUSG00000048677	protein_coding	Tpcn2	ENSMUST00000208148	nonsense_mediated_decay		7	-1	145280282	2785
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000181091	protein_coding		10	-1	93889775	1876
ENSMUSG00000038843	protein_coding	Gcnt1	ENSMUST00000235184	protein_coding	principal1	19	-1	17335436	1837
ENSMUSG00000033352	protein_coding	Map2k4	ENSMUST00000125598	protein_coding		11	-1	65719603	896
ENSMUSG00000002249	protein_coding	Tead3	ENSMUST00000154873	protein_coding		17	-1	28350346	2775
ENSMUSG00000048677	protein_coding	Tpcn2	ENSMUST00000208867	retained_intron		7	-1	145259055	1658
ENSMUSG00000022787	protein_coding	Wdr53	ENSMUST00000141820	protein_coding		16	1	32247227	832
ENSMUSG00000033352	protein_coding	Map2k4	ENSMUST00000140740	processed_transcript		11	-1	65697014	922
ENSMUSG00000038843	protein_coding	Gcnt1	ENSMUST00000174137	retained_intron		19	-1	17356667	1122
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000181217	protein_coding		10	-1	93889784	1984
ENSMUSG00000048677	protein_coding	Tpcn2	ENSMUST00000208841	nonsense_mediated_decay		7	-1	145283922	2852
ENSMUSG00000018395	protein_coding	Kif3a	ENSMUST00000132653	nonsense_mediated_decay		11	1	53579115	770
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000180392	nonsense_mediated_decay		10	-1	93871649	674
ENSMUSG00000048677	protein_coding	Tpcn2	ENSMUST00000208281	retained_intron		7	-1	145262187	483
ENSMUSG00000018395	protein_coding	Kif3a	ENSMUST00000130037	protein_coding		11	1	53593950	799
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000181009	retained_intron		10	-1	93864001	1753
ENSMUSG00000048677	protein_coding	Tpcn2	ENSMUST00000209156	nonsense_mediated_decay		7	-1	145283922	1106
ENSMUSG00000038843	protein_coding	Gcnt1	ENSMUST00000169897	protein_coding	principal1	19	-1	17339568	4594
ENSMUSG00000020335	protein_coding	Zfp354b	ENSMUST00000109124	protein_coding	principal1	11	-1	50931633	2455
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000181470	protein_coding		10	-1	93865503	445
ENSMUSG00000021549	protein_coding	Rasa1	ENSMUST00000109552	protein_coding	principal1	13	-1	85289029	4563
ENSMUSG00000016087	protein_coding	Fli1	ENSMUST00000016231	protein_coding	principal1	9	-1	32541595	3318
ENSMUSG00000109305	protein_coding	Smim38	ENSMUST00000208788	protein_coding	principal1	7	-1	145208080	889
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000181442	retained_intron		10	-1	93871507	331
ENSMUSG00000022787	protein_coding	Wdr53	ENSMUST00000023474	protein_coding	principal1	16	1	32247253	1394
ENSMUSG00000033352	protein_coding	Map2k4	ENSMUST00000140301	nonsense_mediated_decay		11	-1	65788285	751
ENSMUSG00000002249	protein_coding	Tead3	ENSMUST00000114799	protein_coding	principal1	17	-1	28350600	2448
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000180375	protein_coding		10	-1	93889614	724
ENSMUSG00000020335	protein_coding	Zfp354b	ENSMUST00000152296	processed_transcript		11	-1	50930649	656
ENSMUSG00000033352	protein_coding	Map2k4	ENSMUST00000152096	protein_coding		11	-1	65788286	661
ENSMUSG00000021549	protein_coding	Rasa1	ENSMUST00000223598	protein_coding		13	-1	85289130	2102
ENSMUSG00000109305	protein_coding	Smim38	ENSMUST00000208264	processed_transcript		7	-1	145208117	360
ENSMUSG00000020335	protein_coding	Zfp354b	ENSMUST00000164280	protein_coding	principal1	11	-1	50930933	1806
ENSMUSG00000016087	protein_coding	Fli1	ENSMUST00000183767	protein_coding		9	-1	32542861	878
ENSMUSG00000033352	protein_coding	Map2k4	ENSMUST00000130009	nonsense_mediated_decay		11	-1	65788285	484
ENSMUSG00000109305	protein_coding	Smim38	ENSMUST00000207703	retained_intron		7	-1	145207182	447
ENSMUSG00000022787	protein_coding	Wdr53	ENSMUST00000135289	protein_coding		16	1	32247401	566
ENSMUSG00000021549	protein_coding	Rasa1	ENSMUST00000146792	retained_intron		13	-1	85218351	678
ENSMUSG00000109305	protein_coding	Smim38	ENSMUST00000207841	retained_intron		7	-1	145208119	344
ENSMUSG00000098645	antisense	Gm27201	ENSMUST00000183818	antisense		9	1	32508413	416
ENSMUSG00000033352	protein_coding	Map2k4	ENSMUST00000138093	protein_coding		11	-1	65745838	527
ENSMUSG00000022787	protein_coding	Wdr53	ENSMUST00000178573	protein_coding	principal1	16	1	32247227	1153
ENSMUSG00000002249	protein_coding	Tead3	ENSMUST00000156862	protein_coding		17	-1	28350817	2585
ENSMUSG00000059518	protein_coding	Znhit1	ENSMUST00000156963	protein_coding		5	-1	136988021	1208
ENSMUSG00000021549	protein_coding	Rasa1	ENSMUST00000142285	retained_intron		13	-1	85221701	669
ENSMUSG00000102908	processed_pseudogene	Gm7558	ENSMUST00000193221	processed_pseudogene		3	-1	27047953	1165
ENSMUSG00000099808	lincRNA	1700019P21Rik	ENSMUST00000186955	lincRNA		1	-1	138876951	411
ENSMUSG00000021549	protein_coding	Rasa1	ENSMUST00000148014	retained_intron		13	-1	85226695	676
ENSMUSG00000103850	processed_pseudogene	Gm3933	ENSMUST00000195391	processed_pseudogene		1	-1	138916043	439
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000216232	processed_transcript		10	-1	93887486	643
ENSMUSG00000021549	protein_coding	Rasa1	ENSMUST00000149799	retained_intron		13	-1	85226005	641
ENSMUSG00000102365	TEC	Gm37045	ENSMUST00000192016	TEC		1	-1	138962903	2463
ENSMUSG00000059518	protein_coding	Znhit1	ENSMUST00000085941	protein_coding	principal1	5	-1	136986901	740
ENSMUSG00000021364	protein_coding	Elovl2	ENSMUST00000021793	protein_coding	principal1	13	-1	41220405	3840
ENSMUSG00000059518	protein_coding	Znhit1	ENSMUST00000034953	protein_coding		5	-1	136986829	764
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000180688	protein_coding		10	-1	93889814	825
ENSMUSG00000021549	protein_coding	Rasa1	ENSMUST00000152466	retained_intron		13	-1	85231046	831
ENSMUSG00000085918	processed_transcript	Gm13032	ENSMUST00000151848	processed_transcript		4	1	140810993	2001
ENSMUSG00000021697	protein_coding	Depdc1b	ENSMUST00000051594	protein_coding	principal1	13	1	108316332	2563
ENSMUSG00000021549	protein_coding	Rasa1	ENSMUST00000141879	retained_intron		13	-1	85230452	483
ENSMUSG00000024712	protein_coding	Rfk	ENSMUST00000025617	protein_coding	principal1	19	1	17394043	2482
ENSMUSG00000112824	antisense	Gm47917	ENSMUST00000219148	antisense		10	1	54063811	1025
ENSMUSG00000007036	protein_coding	Abhd16a	ENSMUST00000173134	retained_intron		17	1	35089263	574
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000181236	retained_intron		10	-1	93889728	547
ENSMUSG00000021364	protein_coding	Elovl2	ENSMUST00000117096	protein_coding		13	-1	41220162	3797
ENSMUSG00000059518	protein_coding	Znhit1	ENSMUST00000111090	protein_coding		5	-1	136987543	698
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000181104	retained_intron		10	-1	93889761	931
ENSMUSG00000021697	protein_coding	Depdc1b	ENSMUST00000168037	retained_intron		13	1	108316368	674
ENSMUSG00000021549	protein_coding	Rasa1	ENSMUST00000153231	retained_intron		13	-1	85247260	854
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000215642	processed_transcript		10	-1	93889808	116
ENSMUSG00000097069	bidirectional_promoter_lncRNA	Gm16998	ENSMUST00000181899	bidirectional_promoter_lncRNA		10	1	54075922	1230
ENSMUSG00000021697	protein_coding	Depdc1b	ENSMUST00000163307	nonsense_mediated_decay		13	1	108316380	2042
ENSMUSG00000021549	protein_coding	Rasa1	ENSMUST00000132711	retained_intron		13	-1	85250929	585
ENSMUSG00000021697	protein_coding	Depdc1b	ENSMUST00000171178	protein_coding		13	1	108316422	1404
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000180739	processed_transcript		10	-1	93890294	505
ENSMUSG00000019809	protein_coding	Pex3	ENSMUST00000105541	protein_coding		10	-1	13552838	1072
ENSMUSG00000024712	protein_coding	Rfk	ENSMUST00000136162	processed_transcript		19	1	17394568	693
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000197354	protein_coding	alternative2	5	1	19227036	4785
ENSMUSG00000024712	protein_coding	Rfk	ENSMUST00000146171	processed_transcript		19	1	17397437	661
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000181740	processed_transcript		10	-1	93891129	404
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000200518	processed_transcript		5	1	19227046	756
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000183070	nonsense_mediated_decay		9	1	121719169	2576
ENSMUSG00000002249	protein_coding	Tead3	ENSMUST00000127212	retained_intron		17	-1	28350663	3443
ENSMUSG00000002249	protein_coding	Tead3	ENSMUST00000219703	protein_coding		17	-1	28350711	1579
ENSMUSG00000053119	protein_coding	Chmp3	ENSMUST00000059462	protein_coding	principal1	6	1	71543797	2654
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000028049	protein_coding	principal1	1	-1	160792946	2748
ENSMUSG00000112112	lincRNA	Gm48508	ENSMUST00000219735	lincRNA		12	1	45094012	2627
ENSMUSG00000059518	protein_coding	Znhit1	ENSMUST00000111091	protein_coding		5	-1	136987232	1070
ENSMUSG00000036112	protein_coding	Metap2	ENSMUST00000181434	processed_transcript		10	-1	93897093	793
ENSMUSG00000002249	protein_coding	Tead3	ENSMUST00000146668	retained_intron		17	-1	28335415	944
ENSMUSG00000059518	protein_coding	Znhit1	ENSMUST00000137272	protein_coding		5	-1	136987508	347
ENSMUSG00000002249	protein_coding	Tead3	ENSMUST00000151557	retained_intron		17	-1	28336344	347
ENSMUSG00000021697	protein_coding	Depdc1b	ENSMUST00000167413	processed_transcript		13	1	108326528	549
ENSMUSG00000002249	protein_coding	Tead3	ENSMUST00000226172	processed_transcript		17	-1	28336516	11
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000193115	processed_transcript		1	-1	160287525	3644
ENSMUSG00000002249	protein_coding	Tead3	ENSMUST00000233330	retained_intron		17	-1	28350785	2870
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000192281	processed_transcript		1	-1	160293361	4757
ENSMUSG00000021697	protein_coding	Depdc1b	ENSMUST00000172402	retained_intron		13	1	108357426	655
ENSMUSG00000116609	processed_pseudogene	Gm5675	ENSMUST00000231333	processed_pseudogene		16	1	78117100	1026
ENSMUSG00000053119	protein_coding	Chmp3	ENSMUST00000127774	processed_transcript		6	1	71543852	387
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000195114	processed_transcript		1	-1	160307777	826
ENSMUSG00000041870	protein_coding	Ankrd13a	ENSMUST00000102578	protein_coding	principal1	5	1	114774677	3717
ENSMUSG00000053119	protein_coding	Chmp3	ENSMUST00000204535	protein_coding		6	1	71543892	413
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000194696	retained_intron		1	-1	160453773	516
ENSMUSG00000114922	antisense	Ppifos	ENSMUST00000224137	antisense		14	-1	25701282	1159
ENSMUSG00000041870	protein_coding	Ankrd13a	ENSMUST00000140604	processed_transcript		5	1	114774945	2558
ENSMUSG00000053119	protein_coding	Chmp3	ENSMUST00000065364	protein_coding	principal1	6	1	71543917	998
ENSMUSG00000019809	protein_coding	Pex3	ENSMUST00000019945	protein_coding	principal1	10	-1	13553139	2129
ENSMUSG00000090981	protein_coding	Olfr718-ps1	ENSMUST00000215102	protein_coding	principal5	5	-1	143147505	4913
ENSMUSG00000090981	protein_coding	Olfr718-ps1	ENSMUST00000213631	protein_coding	principal5	5	-1	143147557	4737
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000171561	protein_coding	principal2	19	-1	41981157	6607
ENSMUSG00000090981	protein_coding	Olfr718-ps1	ENSMUST00000164536	protein_coding	principal5	5	-1	143147581	3962
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000088516	protein_coding	principal2	5	1	19227051	4843
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000195442	protein_coding		1	-1	160792938	1877
ENSMUSG00000090981	protein_coding	Olfr718-ps1	ENSMUST00000218872	protein_coding	alternative2	5	-1	143138200	963
ENSMUSG00000104223	processed_pseudogene	Gm18428	ENSMUST00000194986	processed_pseudogene		3	-1	76041723	791
ENSMUSG00000019809	protein_coding	Pex3	ENSMUST00000105539	protein_coding		10	-1	13553120	1961
ENSMUSG00000026721	protein_coding	Rabgap1l	ENSMUST00000193810	protein_coding		1	-1	160793211	589
ENSMUSG00000041870	protein_coding	Ankrd13a	ENSMUST00000137519	protein_coding		5	1	114786045	1361
ENSMUSG00000053119	protein_coding	Chmp3	ENSMUST00000132917	nonsense_mediated_decay		6	1	71543929	356
ENSMUSG00000053119	protein_coding	Chmp3	ENSMUST00000204199	protein_coding		6	1	71543929	350
ENSMUSG00000102172	TEC	Gm37873	ENSMUST00000194571	TEC		1	-1	160650302	2280
ENSMUSG00000041870	protein_coding	Ankrd13a	ENSMUST00000129001	processed_transcript		5	1	114795743	2637
ENSMUSG00000021868	protein_coding	Ppif	ENSMUST00000125881	retained_intron		14	1	25694154	3637
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000197443	protein_coding	alternative2	5	1	19227055	6578
ENSMUSG00000041870	protein_coding	Ankrd13a	ENSMUST00000131803	processed_transcript		5	1	114799457	2233
ENSMUSG00000041870	protein_coding	Ankrd13a	ENSMUST00000200704	retained_intron		5	1	114799571	1993
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000199384	retained_intron		5	1	19227397	3125
ENSMUSG00000103432	TEC	6720464F23Rik	ENSMUST00000193946	TEC		1	-1	160612450	3496
ENSMUSG00000053119	protein_coding	Chmp3	ENSMUST00000142169	processed_transcript		6	1	71544353	347
ENSMUSG00000104026	TEC	Gm37212	ENSMUST00000192582	TEC		1	-1	160573810	3650
ENSMUSG00000020131	protein_coding	Pcsk4	ENSMUST00000128653	nonsense_mediated_decay		10	-1	80329455	2350
ENSMUSG00000053119	protein_coding	Chmp3	ENSMUST00000128382	retained_intron		6	1	71577589	436
ENSMUSG00000103522	TEC	9430087J23Rik	ENSMUST00000195414	TEC		1	-1	160316495	1152
ENSMUSG00000107406	antisense	1700040L08Rik	ENSMUST00000205011	antisense		6	-1	71544114	541
ENSMUSG00000104020	TEC	Gm37215	ENSMUST00000194927	TEC		1	-1	160591140	1259
ENSMUSG00000019809	protein_coding	Pex3	ENSMUST00000133332	retained_intron		10	-1	13535961	2959
ENSMUSG00000104302	antisense	Gm36975	ENSMUST00000194105	antisense		1	1	160264324	1828
ENSMUSG00000033880	protein_coding	Lgals3bp	ENSMUST00000144529	protein_coding		11	-1	118398151	686
ENSMUSG00000021868	protein_coding	Ppif	ENSMUST00000022419	protein_coding	principal1	14	1	25694170	1549
ENSMUSG00000021346	protein_coding	Prl8a8	ENSMUST00000110350	protein_coding	alternative2	13	-1	27513217	1003
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000101558	protein_coding		5	1	19907518	6530
ENSMUSG00000019809	protein_coding	Pex3	ENSMUST00000125207	processed_transcript		10	-1	13552864	771
ENSMUSG00000021868	protein_coding	Ppif	ENSMUST00000223872	retained_intron		14	1	25694194	1664
ENSMUSG00000019809	protein_coding	Pex3	ENSMUST00000145337	processed_transcript		10	-1	13552819	480
ENSMUSG00000112199	processed_pseudogene	Gm19090	ENSMUST00000218187	processed_pseudogene		10	1	119342492	774
ENSMUSG00000111972	TEC	Gm40778	ENSMUST00000217825	TEC		10	-1	119411222	1344
ENSMUSG00000025370	protein_coding	Cdh9	ENSMUST00000228307	protein_coding	principal1	15	1	16728756	3539
ENSMUSG00000029782	protein_coding	Tmem209	ENSMUST00000064330	protein_coding		6	-1	30509715	1679
ENSMUSG00000025329	protein_coding	Padi1	ENSMUST00000026378	protein_coding	principal1	4	-1	140845778	3754
ENSMUSG00000019809	protein_coding	Pex3	ENSMUST00000170376	protein_coding		10	-1	13553142	1381
ENSMUSG00000112393	TEC	Gm48655	ENSMUST00000217762	TEC		12	-1	55816527	1344
ENSMUSG00000041936	protein_coding	Agrn	ENSMUST00000154494	retained_intron		4	-1	156169086	2071
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000115267	protein_coding		5	1	19907745	4478
ENSMUSG00000029782	protein_coding	Tmem209	ENSMUST00000138823	nonsense_mediated_decay		6	-1	30509716	1905
ENSMUSG00000116915	processed_pseudogene	Gm17900	ENSMUST00000231611	processed_pseudogene		16	1	46537835	1198
ENSMUSG00000007036	protein_coding	Abhd16a	ENSMUST00000007251	protein_coding	principal1	17	1	35089291	1945
ENSMUSG00000001158	protein_coding	Snrnp27	ENSMUST00000001186	protein_coding	principal1	6	-1	86684522	885
ENSMUSG00000025370	protein_coding	Cdh9	ENSMUST00000026432	protein_coding	principal1	15	1	16778101	2892
ENSMUSG00000024878	protein_coding	Cbwd1	ENSMUST00000025815	protein_coding	principal1	19	-1	24961601	1929
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000200443	protein_coding		5	1	19907961	417
ENSMUSG00000115460	antisense	Gm49127	ENSMUST00000227900	antisense		15	-1	16850964	972
ENSMUSG00000092351	unprocessed_pseudogene	Vmn1r-ps64	ENSMUST00000173746	unprocessed_pseudogene		7	1	12201702	655
ENSMUSG00000024878	protein_coding	Cbwd1	ENSMUST00000237315	processed_transcript		19	-1	24924836	346
ENSMUSG00000115744	protein_coding	Vmn1r80	ENSMUST00000228047	retained_intron		7	1	12189286	11503
ENSMUSG00000115744	protein_coding	Vmn1r80	ENSMUST00000228563	retained_intron		7	1	12189286	7416
ENSMUSG00000115744	protein_coding	Vmn1r80	ENSMUST00000227205	protein_coding	principal1	7	1	12189286	10892
ENSMUSG00000100558	lincRNA	1700025F24Rik	ENSMUST00000185238	lincRNA		10	1	119413444	894
ENSMUSG00000115744	protein_coding	Vmn1r80	ENSMUST00000227240	retained_intron		7	1	12189286	11386
ENSMUSG00000115744	protein_coding	Vmn1r80	ENSMUST00000227755	protein_coding	principal1	7	1	12189286	10455
ENSMUSG00000115744	protein_coding	Vmn1r80	ENSMUST00000227471	protein_coding		7	1	12189286	6368
ENSMUSG00000115744	protein_coding	Vmn1r80	ENSMUST00000228578	protein_coding	principal1	7	1	12189290	11005
ENSMUSG00000115744	protein_coding	Vmn1r80	ENSMUST00000228028	protein_coding		7	1	12189290	6918
ENSMUSG00000001158	protein_coding	Snrnp27	ENSMUST00000131674	processed_transcript		6	-1	86684491	822
ENSMUSG00000021346	protein_coding	Prl8a8	ENSMUST00000224072	protein_coding	alternative2	13	-1	27513199	1128
ENSMUSG00000115744	protein_coding	Vmn1r80	ENSMUST00000075053	protein_coding	principal1	7	1	12192965	927
ENSMUSG00000001158	protein_coding	Snrnp27	ENSMUST00000113683	protein_coding		6	-1	86684522	1005
ENSMUSG00000024878	protein_coding	Cbwd1	ENSMUST00000236250	nonsense_mediated_decay		19	-1	24961514	906
ENSMUSG00000029782	protein_coding	Tmem209	ENSMUST00000115160	protein_coding	principal3	6	-1	30509783	3485
ENSMUSG00000001158	protein_coding	Snrnp27	ENSMUST00000133404	processed_transcript		6	-1	86684517	372
ENSMUSG00000024878	protein_coding	Cbwd1	ENSMUST00000236790	nonsense_mediated_decay		19	-1	24961610	802
ENSMUSG00000084901	processed_transcript	Gm13266	ENSMUST00000192745	retained_intron		2	1	14512591	547
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000197822	processed_transcript		5	1	20202569	853
ENSMUSG00000021346	protein_coding	Prl8a8	ENSMUST00000018389	protein_coding	principal3	13	-1	27513213	927
ENSMUSG00000024878	protein_coding	Cbwd1	ENSMUST00000235225	retained_intron		19	-1	24949253	570
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000090023	protein_coding	alternative1	16	1	20535478	2080
ENSMUSG00000112049	processed_pseudogene	Gm48269	ENSMUST00000218126	processed_pseudogene		10	-1	50184149	1111
ENSMUSG00000112667	processed_pseudogene	Gm48270	ENSMUST00000218660	processed_pseudogene		10	1	50255675	3848
ENSMUSG00000033880	protein_coding	Lgals3bp	ENSMUST00000043722	protein_coding	principal1	11	-1	118402092	2330
ENSMUSG00000110779	TEC	Gm48271	ENSMUST00000215028	TEC		10	-1	50296142	3497
ENSMUSG00000110896	TEC	Gm48273	ENSMUST00000217629	TEC		10	-1	50334749	986
ENSMUSG00000029782	protein_coding	Tmem209	ENSMUST00000115157	protein_coding	alternative1	6	-1	30509718	2273
ENSMUSG00000110720	processed_pseudogene	Gm46223	ENSMUST00000215196	processed_pseudogene		10	-1	50422808	675
ENSMUSG00000021346	protein_coding	Prl8a8	ENSMUST00000223621	protein_coding		13	-1	27513171	771
ENSMUSG00000084901	processed_transcript	Gm13266	ENSMUST00000141869	lincRNA		2	1	14512591	579
ENSMUSG00000029782	protein_coding	Tmem209	ENSMUST00000102991	protein_coding		6	-1	30509715	1718
ENSMUSG00000111083	TEC	Gm48274	ENSMUST00000216959	TEC		10	1	50424086	255
ENSMUSG00000007036	protein_coding	Abhd16a	ENSMUST00000173846	nonsense_mediated_decay		17	1	35089314	1824
ENSMUSG00000033880	protein_coding	Lgals3bp	ENSMUST00000106290	protein_coding		11	-1	118401852	798
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000197553	protein_coding		5	1	20228186	3264
ENSMUSG00000084901	processed_transcript	Gm13266	ENSMUST00000193364	lincRNA		2	1	14512599	421
ENSMUSG00000111202	lincRNA	Gm48275	ENSMUST00000213811	lincRNA		10	-1	50425330	287
ENSMUSG00000029782	protein_coding	Tmem209	ENSMUST00000202269	retained_intron		6	-1	30492179	1824
ENSMUSG00000109630	processed_pseudogene	Gm45364	ENSMUST00000210883	processed_pseudogene		7	-1	12206353	159
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000208219	protein_coding		5	1	20228186	3266
ENSMUSG00000007036	protein_coding	Abhd16a	ENSMUST00000173190	retained_intron		17	1	35089870	778
ENSMUSG00000033880	protein_coding	Lgals3bp	ENSMUST00000141459	processed_transcript		11	-1	118401872	647
ENSMUSG00000092476	unprocessed_pseudogene	Vmn1r-ps65	ENSMUST00000174235	unprocessed_pseudogene		7	1	12214595	951
ENSMUSG00000029782	protein_coding	Tmem209	ENSMUST00000154547	protein_coding		6	-1	30509749	598
ENSMUSG00000007036	protein_coding	Abhd16a	ENSMUST00000172584	processed_transcript		17	1	35096352	536
ENSMUSG00000033880	protein_coding	Lgals3bp	ENSMUST00000127054	protein_coding		11	-1	118401038	335
ENSMUSG00000110121	processed_pseudogene	Gm45367	ENSMUST00000210171	processed_pseudogene		7	-1	12220442	347
ENSMUSG00000007036	protein_coding	Abhd16a	ENSMUST00000173579	retained_intron		17	1	35099931	525
ENSMUSG00000022181	protein_coding	C6	ENSMUST00000162585	protein_coding	principal2	15	1	4727175	2876
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000198908	processed_transcript		5	1	20533500	831
ENSMUSG00000110042	lincRNA	Gm4224	ENSMUST00000211557	lincRNA		7	1	12221316	1594
ENSMUSG00000007036	protein_coding	Abhd16a	ENSMUST00000173247	retained_intron		17	1	35100854	519
ENSMUSG00000072983	protein_coding	4933414I15Rik	ENSMUST00000109123	protein_coding	principal1	11	-1	50943765	2206
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000007216	protein_coding	principal3	16	1	20535480	2937
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000207284	protein_coding		5	1	20534338	714
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000055539	protein_coding	principal3	10	1	128232065	4457
ENSMUSG00000029782	protein_coding	Tmem209	ENSMUST00000150480	retained_intron		6	-1	30509722	3128
ENSMUSG00000022181	protein_coding	C6	ENSMUST00000161997	protein_coding		15	1	4727216	921
ENSMUSG00000029782	protein_coding	Tmem209	ENSMUST00000148638	protein_coding		6	-1	30509724	459
ENSMUSG00000101106	transcribed_unprocessed_pseudogene	Gm28819	ENSMUST00000186691	processed_transcript		Y	1	68986605	572
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000199514	protein_coding		5	1	20602497	899
ENSMUSG00000072983	protein_coding	4933414I15Rik	ENSMUST00000156329	processed_transcript		11	-1	50943741	1336
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000035112	protein_coding	principal1	9	1	121719176	7022
ENSMUSG00000064010	protein_coding	Dppa1	ENSMUST00000077173	protein_coding	principal1	11	-1	46629261	1575
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000232001	protein_coding		16	1	20535519	594
ENSMUSG00000040003	protein_coding	Magi2	ENSMUST00000197307	processed_transcript		5	1	20701669	826
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000133443	retained_intron		16	1	20535549	275
ENSMUSG00000022181	protein_coding	C6	ENSMUST00000162350	protein_coding	alternative2	15	1	4731656	2874
ENSMUSG00000106559	processed_pseudogene	Gm43680	ENSMUST00000199466	processed_pseudogene		5	-1	20260962	340
ENSMUSG00000062814	protein_coding	Ssxa1	ENSMUST00000133987	protein_coding	principal1	X	1	21118372	423
ENSMUSG00000092534	protein_coding	Pagr1b	ENSMUST00000172958	nonsense_mediated_decay	principal1	7	-1	127016484	693
ENSMUSG00000097842	lincRNA	9330104G04Rik	ENSMUST00000181501	lincRNA		7	-1	16874886	2242
ENSMUSG00000109946	protein_coding	Brd3os	ENSMUST00000209765	protein_coding	principal1	2	1	27442324	1898
ENSMUSG00000097842	lincRNA	9330104G04Rik	ENSMUST00000205647	lincRNA		7	-1	16874886	1943
ENSMUSG00000020131	protein_coding	Pcsk4	ENSMUST00000020340	protein_coding	principal1	10	-1	80329498	2539
ENSMUSG00000062814	protein_coding	Ssxa1	ENSMUST00000072593	protein_coding	principal1	X	1	21115820	433
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182763	nonsense_mediated_decay		9	1	121719178	717
ENSMUSG00000112891	lincRNA	Gm47391	ENSMUST00000219499	lincRNA		12	1	8912924	2425
ENSMUSG00000064010	protein_coding	Dppa1	ENSMUST00000109227	protein_coding	principal1	11	-1	46629261	551
ENSMUSG00000022181	protein_coding	C6	ENSMUST00000162729	processed_transcript		15	1	4765945	573
ENSMUSG00000096937	lincRNA	Gm10825	ENSMUST00000180537	lincRNA		10	1	22402883	4478
ENSMUSG00000022181	protein_coding	C6	ENSMUST00000022788	protein_coding	principal2	15	1	4727216	2447
ENSMUSG00000003746	protein_coding	Man1a	ENSMUST00000003843	protein_coding	principal1	10	-1	54075796	5137
ENSMUSG00000109946	protein_coding	Brd3os	ENSMUST00000209262	processed_transcript		2	1	27442503	509
ENSMUSG00000083892	processed_pseudogene	Gm1848	ENSMUST00000120711	processed_pseudogene		X	1	21146844	789
ENSMUSG00000020131	protein_coding	Pcsk4	ENSMUST00000147132	retained_intron		10	-1	80323126	1197
ENSMUSG00000043066	protein_coding	Vmn1r66	ENSMUST00000226202	retained_intron		7	-1	10278006	3345
ENSMUSG00000112456	processed_pseudogene	Gm6991	ENSMUST00000218475	processed_pseudogene		10	1	50480996	1178
ENSMUSG00000020131	protein_coding	Pcsk4	ENSMUST00000130521	retained_intron		10	-1	80323127	1168
ENSMUSG00000112529	processed_pseudogene	Gm46199	ENSMUST00000220373	processed_pseudogene		10	-1	50523269	1693
ENSMUSG00000092404	lincRNA	Gm9921	ENSMUST00000219455	lincRNA		12	1	45429377	1396
ENSMUSG00000020131	protein_coding	Pcsk4	ENSMUST00000135071	nonsense_mediated_decay		10	-1	80329399	1641
ENSMUSG00000003746	protein_coding	Man1a	ENSMUST00000105470	protein_coding	principal1	10	-1	54075709	2847
ENSMUSG00000019789	protein_coding	Hey2	ENSMUST00000019924	protein_coding	principal1	10	-1	30842801	2550
ENSMUSG00000003746	protein_coding	Man1a	ENSMUST00000218317	nonsense_mediated_decay		10	-1	54075709	2747
ENSMUSG00000043066	protein_coding	Vmn1r66	ENSMUST00000227719	protein_coding	principal1	7	-1	10278006	2765
ENSMUSG00000092404	lincRNA	Gm9921	ENSMUST00000173293	lincRNA		12	1	45437181	4399
ENSMUSG00000043066	protein_coding	Vmn1r66	ENSMUST00000228622	protein_coding	principal1	7	-1	10278006	3304
ENSMUSG00000101106	transcribed_unprocessed_pseudogene	Gm28819	ENSMUST00000188291	processed_transcript		Y	1	68986661	572
ENSMUSG00000087358	lincRNA	4930453H23Rik	ENSMUST00000125569	lincRNA		X	-1	21221665	1719
ENSMUSG00000043066	protein_coding	Vmn1r66	ENSMUST00000228086	protein_coding	principal1	7	-1	10278006	3013
ENSMUSG00000003746	protein_coding	Man1a	ENSMUST00000220088	protein_coding		10	-1	54076609	2354
ENSMUSG00000101106	transcribed_unprocessed_pseudogene	Gm28819	ENSMUST00000190079	processed_transcript		Y	1	68986694	302
ENSMUSG00000019789	protein_coding	Hey2	ENSMUST00000217504	retained_intron		10	-1	30842015	2206
ENSMUSG00000003746	protein_coding	Man1a	ENSMUST00000219234	retained_intron		10	-1	53977115	1259
ENSMUSG00000087358	lincRNA	4930453H23Rik	ENSMUST00000155208	lincRNA		X	-1	21221564	567
ENSMUSG00000087358	lincRNA	4930453H23Rik	ENSMUST00000178516	lincRNA		X	-1	21207314	258
ENSMUSG00000081670	unprocessed_pseudogene	Gm15697	ENSMUST00000121946	unprocessed_pseudogene		6	-1	38546074	2902
ENSMUSG00000043066	protein_coding	Vmn1r66	ENSMUST00000060374	protein_coding	principal1	7	-1	10275351	1524
ENSMUSG00000110918	processed_pseudogene	Gm48862	ENSMUST00000215584	processed_pseudogene		10	1	30880517	334
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000082054	protein_coding		15	1	39198332	4800
ENSMUSG00000101106	transcribed_unprocessed_pseudogene	Gm28819	ENSMUST00000187843	processed_transcript		Y	1	68986706	397
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000126788	nonsense_mediated_decay		16	1	20537612	655
ENSMUSG00000101106	transcribed_unprocessed_pseudogene	Gm28819	ENSMUST00000188816	transcribed_unprocessed_pseudogene		Y	1	68988197	615
ENSMUSG00000111778	lincRNA	Gm30676	ENSMUST00000214464	lincRNA		10	-1	31066244	793
ENSMUSG00000087586	lincRNA	Gm6938	ENSMUST00000123014	lincRNA		X	-1	21334727	771
ENSMUSG00000111778	lincRNA	Gm30676	ENSMUST00000214000	lincRNA		10	-1	31066234	1165
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182904	retained_intron		9	1	121719181	8950
ENSMUSG00000111778	lincRNA	Gm30676	ENSMUST00000217645	lincRNA		10	-1	31066242	416
ENSMUSG00000111396	processed_pseudogene	Gm7333	ENSMUST00000213449	processed_pseudogene		10	1	31209273	1060
ENSMUSG00000101539	lincRNA	Gm28252	ENSMUST00000188457	lincRNA		Y	1	64634929	1500
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182311	protein_coding		9	1	121719215	407
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000075253	protein_coding	principal1	17	-1	32947402	1752
ENSMUSG00000101106	transcribed_unprocessed_pseudogene	Gm28819	ENSMUST00000190333	processed_transcript		Y	1	68988634	324
ENSMUSG00000101106	transcribed_unprocessed_pseudogene	Gm28819	ENSMUST00000187974	processed_transcript		Y	1	68988634	542
ENSMUSG00000111893	processed_pseudogene	Gm47928	ENSMUST00000219549	processed_pseudogene		12	-1	32220669	554
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000183311	retained_intron		9	1	121719217	2548
ENSMUSG00000032044	protein_coding	Rpusd4	ENSMUST00000034543	protein_coding	principal1	9	1	35267865	1821
ENSMUSG00000101539	lincRNA	Gm28252	ENSMUST00000189340	lincRNA		Y	1	64635382	438
ENSMUSG00000101106	transcribed_unprocessed_pseudogene	Gm28819	ENSMUST00000187416	processed_transcript		Y	1	68989216	1335
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000183207	processed_transcript		9	1	121719298	268
ENSMUSG00000051537	transcribed_processed_pseudogene	Gm5124	ENSMUST00000127554	processed_transcript		X	1	21360865	1970
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000139353	protein_coding		17	-1	32947379	1389
ENSMUSG00000044542	protein_coding	Prop1	ENSMUST00000051159	protein_coding	principal1	11	-1	50953765	1133
ENSMUSG00000027406	protein_coding	Idh3b	ENSMUST00000028892	protein_coding	principal2	2	-1	130284547	1616
ENSMUSG00000078794	protein_coding	Dact3	ENSMUST00000108493	protein_coding	principal1	7	1	16875317	2989
ENSMUSG00000051537	transcribed_processed_pseudogene	Gm5124	ENSMUST00000132683	transcribed_processed_pseudogene		X	1	21360940	2083
ENSMUSG00000032044	protein_coding	Rpusd4	ENSMUST00000130552	retained_intron		9	1	35272291	801
ENSMUSG00000115027	protein_coding	Vmn1r81	ENSMUST00000227973	protein_coding	principal2	7	-1	12268269	14002
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000235098	retained_intron		17	-1	32925494	424
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000227243	protein_coding	alternative1	15	1	39198338	4760
ENSMUSG00000115027	protein_coding	Vmn1r81	ENSMUST00000228764	protein_coding	principal2	7	-1	12268269	13763
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182179	nonsense_mediated_decay		9	1	121719410	1460
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000134981	retained_intron		16	1	20540623	791
ENSMUSG00000032044	protein_coding	Rpusd4	ENSMUST00000146571	retained_intron		9	1	35272647	495
ENSMUSG00000027406	protein_coding	Idh3b	ENSMUST00000184538	nonsense_mediated_decay		2	-1	130280551	452
ENSMUSG00000115027	protein_coding	Vmn1r81	ENSMUST00000228482	protein_coding	alternative2	7	-1	12268269	13495
ENSMUSG00000044542	protein_coding	Prop1	ENSMUST00000159179	retained_intron		11	-1	50952454	482
ENSMUSG00000027406	protein_coding	Idh3b	ENSMUST00000239288	protein_coding	alternative2	2	-1	130284461	1233
ENSMUSG00000115027	protein_coding	Vmn1r81	ENSMUST00000227080	protein_coding	alternative2	7	-1	12268269	13256
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000148507	retained_intron		16	1	20540753	625
ENSMUSG00000117959	antisense	D330050I16Rik	ENSMUST00000237256	antisense		19	1	5388336	1266
ENSMUSG00000032044	protein_coding	Rpusd4	ENSMUST00000144582	nonsense_mediated_decay		9	1	35275197	508
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000135420	retained_intron		16	1	20540797	618
ENSMUSG00000044542	protein_coding	Prop1	ENSMUST00000162420	protein_coding		11	-1	50953751	488
ENSMUSG00000115027	protein_coding	Vmn1r81	ENSMUST00000086232	protein_coding	principal2	7	-1	12260679	921
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182225	protein_coding		9	1	121719444	2942
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000131203	retained_intron		16	1	20541904	752
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000137222	nonsense_mediated_decay		17	-1	32947366	1483
ENSMUSG00000114991	lincRNA	1700128I11Rik	ENSMUST00000228144	lincRNA		14	-1	48362615	1166
ENSMUSG00000083542	unprocessed_pseudogene	Olfr1379-ps1	ENSMUST00000120726	unprocessed_pseudogene		11	1	50958948	1001
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000042917	protein_coding	principal2	15	1	39198363	4719
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182337	protein_coding		9	1	121719827	452
ENSMUSG00000027406	protein_coding	Idh3b	ENSMUST00000149843	retained_intron		2	-1	130284434	2049
ENSMUSG00000040627	protein_coding	Aicda	ENSMUST00000043301	protein_coding	principal1	6	1	122553801	2405
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000150986	retained_intron		16	1	20542036	530
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000123653	retained_intron		17	-1	32925951	714
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000234534	retained_intron		17	-1	32931008	975
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182395	retained_intron		9	1	121729398	417
ENSMUSG00000027406	protein_coding	Idh3b	ENSMUST00000124868	retained_intron		2	-1	130284415	620
ENSMUSG00000115687	processed_pseudogene	Gm18962	ENSMUST00000228744	processed_pseudogene		14	-1	48388005	892
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000234946	nonsense_mediated_decay		17	-1	32947361	731
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182086	retained_intron		9	1	121731147	703
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000228839	protein_coding		15	1	39391800	1379
ENSMUSG00000028403	protein_coding	Zdhhc21	ENSMUST00000030110	protein_coding	principal1	4	-1	82859673	8763
ENSMUSG00000022841	protein_coding	Ap2m1	ENSMUST00000150537	retained_intron		16	1	20542479	593
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000234083	protein_coding		17	-1	32947392	730
ENSMUSG00000098192	processed_pseudogene	Gm3534	ENSMUST00000182522	processed_pseudogene		14	1	48408618	1001
ENSMUSG00000040627	protein_coding	Aicda	ENSMUST00000160685	protein_coding		6	1	122560485	1292
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000226243	processed_transcript		15	1	39434588	581
ENSMUSG00000084107	processed_pseudogene	Gm13700	ENSMUST00000118624	processed_pseudogene		2	-1	80862282	1128
ENSMUSG00000003746	protein_coding	Man1a	ENSMUST00000146483	retained_intron		10	-1	54075709	3356
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000234683	nonsense_mediated_decay		17	-1	32947372	500
ENSMUSG00000090044	processed_pseudogene	Gm16557	ENSMUST00000159182	processed_pseudogene		6	-1	122563473	191
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000216573	retained_intron		9	1	121740656	1065
ENSMUSG00000003746	protein_coding	Man1a	ENSMUST00000105469	processed_transcript		10	-1	54075736	2224
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000141325	nonsense_mediated_decay		17	-1	32947402	741
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000227381	protein_coding		15	1	39436997	4581
ENSMUSG00000003746	protein_coding	Man1a	ENSMUST00000133330	retained_intron		10	-1	54075737	2471
ENSMUSG00000090192	processed_transcript	Gm16556	ENSMUST00000162980	processed_transcript		6	-1	122570849	356
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000213351	retained_intron		9	1	121750415	741
ENSMUSG00000028403	protein_coding	Zdhhc21	ENSMUST00000173741	nonsense_mediated_decay		4	-1	82859561	3203
ENSMUSG00000090192	processed_transcript	Gm16556	ENSMUST00000162608	processed_transcript		6	-1	122570825	471
ENSMUSG00000076666	IG_V_gene	Ighv14-4	ENSMUST00000195706	IG_V_gene	principal5	12	-1	114176867	351
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000228867	processed_transcript		15	1	39437238	803
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000145683	nonsense_mediated_decay		17	-1	32947360	455
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182503	nonsense_mediated_decay		9	1	121750786	539
ENSMUSG00000026775	protein_coding	Yme1l1	ENSMUST00000125004	processed_transcript		2	1	23156518	2769
ENSMUSG00000028403	protein_coding	Zdhhc21	ENSMUST00000107239	protein_coding	principal1	4	-1	82859958	1148
ENSMUSG00000089931	processed_pseudogene	Gm8459	ENSMUST00000162504	processed_pseudogene		6	-1	122567474	760
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000227830	retained_intron		15	1	39585185	862
ENSMUSG00000076666	IG_V_gene	Ighv14-4	ENSMUST00000103475	IG_V_gene	alternative2	12	-1	114176862	333
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182607	retained_intron		9	1	121751215	789
ENSMUSG00000028403	protein_coding	Zdhhc21	ENSMUST00000139401	protein_coding		4	-1	82850814	644
ENSMUSG00000029191	protein_coding	Rfc1	ENSMUST00000203581	protein_coding	alternative2	5	-1	65335564	4689
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182713	protein_coding		9	1	121751667	811
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000228269	processed_transcript		15	1	39586707	299
ENSMUSG00000027249	protein_coding	F2	ENSMUST00000111335	protein_coding	alternative2	2	-1	91636407	1969
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000227469	processed_transcript		15	1	39659566	458
ENSMUSG00000032525	protein_coding	Nktr	ENSMUST00000182076	retained_intron		9	1	121752527	678
ENSMUSG00000028403	protein_coding	Zdhhc21	ENSMUST00000144139	retained_intron		4	-1	82859554	4244
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000234532	retained_intron		17	-1	32947380	632
ENSMUSG00000037386	protein_coding	Rims2	ENSMUST00000226410	protein_coding		15	1	39659566	3685
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000146718	retained_intron		17	-1	32947391	1657
ENSMUSG00000024055	protein_coding	Cyp4f13	ENSMUST00000234653	processed_transcript		17	-1	32947335	663
ENSMUSG00000097820	antisense	E530011L22Rik	ENSMUST00000181325	antisense		9	-1	121759943	5282
ENSMUSG00000027249	protein_coding	F2	ENSMUST00000153182	processed_transcript		2	-1	91636395	3167
ENSMUSG00000028403	protein_coding	Zdhhc21	ENSMUST00000156055	protein_coding		4	-1	82859573	515
ENSMUSG00000097820	antisense	E530011L22Rik	ENSMUST00000216791	antisense		9	-1	121759788	2007
ENSMUSG00000047182	protein_coding	Irs3	ENSMUST00000196511	protein_coding	alternative2	5	-1	137645537	1281
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000170209	retained_intron		19	-1	41964627	3780
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000163287	protein_coding		19	-1	41969722	3002
ENSMUSG00000113737	lincRNA	BB123696	ENSMUST00000222580	lincRNA		13	-1	52735608	2056
ENSMUSG00000027249	protein_coding	F2	ENSMUST00000028681	protein_coding	principal2	2	-1	91636414	1988
ENSMUSG00000113737	lincRNA	BB123696	ENSMUST00000223209	lincRNA		13	-1	52757205	1756
ENSMUSG00000111000	TEC	Gm47108	ENSMUST00000215257	TEC		9	-1	121778146	3123
ENSMUSG00000024621	protein_coding	Csf1r	ENSMUST00000237873	processed_transcript		18	1	61100598	465
ENSMUSG00000047182	protein_coding	Irs3	ENSMUST00000057314	protein_coding	principal2	5	-1	137645714	2337
ENSMUSG00000074001	protein_coding	Klhl40	ENSMUST00000216358	retained_intron		9	1	121777607	1368
ENSMUSG00000092389	antisense	Gm20483	ENSMUST00000173162	antisense		17	1	35651828	851
ENSMUSG00000046345	protein_coding	Smco1	ENSMUST00000093183	protein_coding	principal1	16	1	32271468	1410
ENSMUSG00000021548	protein_coding	Ccnh	ENSMUST00000022030	protein_coding	principal1	13	1	85189408	2045
ENSMUSG00000066158	lincRNA	AY512931	ENSMUST00000139751	lincRNA		8	-1	45065418	2395
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000163398	nonsense_mediated_decay		19	-1	41981117	3378
ENSMUSG00000023330	protein_coding	Dtwd1	ENSMUST00000110437	protein_coding	principal1	2	1	126154541	1276
ENSMUSG00000047221	protein_coding	Fam185a	ENSMUST00000056045	protein_coding	principal1	5	1	21424958	3027
ENSMUSG00000066158	lincRNA	AY512931	ENSMUST00000166107	lincRNA		8	-1	45062453	387
ENSMUSG00000117866	processed_pseudogene	Gm50175	ENSMUST00000237664	processed_pseudogene		18	-1	65835744	271
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000164776	nonsense_mediated_decay		19	-1	41981136	3412
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000026168	protein_coding	alternative2	19	-1	41981132	3162
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000166090	nonsense_mediated_decay		19	-1	41955138	1859
ENSMUSG00000117910	processed_pseudogene	Gm50174	ENSMUST00000236915	processed_pseudogene		18	1	65837287	189
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000145710	retained_intron		10	1	128232080	4573
ENSMUSG00000047221	protein_coding	Fam185a	ENSMUST00000153301	retained_intron		5	1	21425001	1590
ENSMUSG00000023330	protein_coding	Dtwd1	ENSMUST00000170908	protein_coding	principal1	2	1	126152141	1342
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000169779	retained_intron		19	-1	41945627	432
ENSMUSG00000021548	protein_coding	Ccnh	ENSMUST00000165077	protein_coding		13	1	85189435	527
ENSMUSG00000021548	protein_coding	Ccnh	ENSMUST00000164127	protein_coding		13	1	85189448	1718
ENSMUSG00000047221	protein_coding	Fam185a	ENSMUST00000146056	processed_transcript		5	1	21434729	941
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000171755	retained_intron		19	-1	41981139	2810
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000167820	protein_coding		19	-1	41953944	859
ENSMUSG00000073563	protein_coding	Csnk1g3	ENSMUST00000069597	protein_coding		18	1	53862122	4249
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000165043	retained_intron		19	-1	41948232	599
ENSMUSG00000021548	protein_coding	Ccnh	ENSMUST00000163600	protein_coding		13	1	85189477	1055
ENSMUSG00000102119	lincRNA	Gm28462	ENSMUST00000188058	lincRNA		Y	-1	69001497	182
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000105244	protein_coding	alternative2	10	1	128232089	4341
ENSMUSG00000102119	lincRNA	Gm28462	ENSMUST00000185217	lincRNA		Y	-1	69001511	374
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000113462	protein_coding	principal4	19	1	6418731	6667
ENSMUSG00000054764	protein_coding	Mtnr1a	ENSMUST00000067984	protein_coding	principal1	8	1	45069137	1576
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000169775	nonsense_mediated_decay		19	-1	41981137	2630
ENSMUSG00000097439	antisense	Gm16754	ENSMUST00000193875	antisense		9	1	21225371	574
ENSMUSG00000021548	protein_coding	Ccnh	ENSMUST00000163713	protein_coding		13	1	85202401	599
ENSMUSG00000073563	protein_coding	Csnk1g3	ENSMUST00000237880	protein_coding	principal1	18	1	53862188	2180
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000166517	retained_intron		19	-1	41951344	807
ENSMUSG00000034926	protein_coding	Dhcr24	ENSMUST00000047973	protein_coding	principal1	4	1	106561038	4028
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000105243	protein_coding		10	1	128232091	1746
ENSMUSG00000058132	protein_coding	Vmn1r82	ENSMUST00000072801	protein_coding	principal1	7	1	12300430	4784
ENSMUSG00000021548	protein_coding	Ccnh	ENSMUST00000172029	processed_transcript		13	1	85211322	465
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000168484	nonsense_mediated_decay		19	-1	41981130	2368
ENSMUSG00000073563	protein_coding	Csnk1g3	ENSMUST00000236399	protein_coding		18	1	53932244	422
ENSMUSG00000097439	antisense	Gm16754	ENSMUST00000181222	antisense		9	1	21225371	2077
ENSMUSG00000054764	protein_coding	Mtnr1a	ENSMUST00000130141	protein_coding		8	1	45069374	277
ENSMUSG00000058132	protein_coding	Vmn1r82	ENSMUST00000227672	protein_coding		7	1	12300430	3651
ENSMUSG00000054764	protein_coding	Mtnr1a	ENSMUST00000209488	processed_transcript		8	1	45085167	1669
ENSMUSG00000030681	protein_coding	Mvp	ENSMUST00000165096	protein_coding	principal1	7	-1	127014621	2837
ENSMUSG00000021548	protein_coding	Ccnh	ENSMUST00000166932	retained_intron		13	1	85211784	297
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000168737	retained_intron		19	-1	41955167	141
ENSMUSG00000031910	protein_coding	Has3	ENSMUST00000034385	protein_coding	principal1	8	1	106870242	5912
ENSMUSG00000029191	protein_coding	Rfc1	ENSMUST00000172732	protein_coding	alternative2	5	-1	65335621	4699
ENSMUSG00000097439	antisense	Gm16754	ENSMUST00000193429	antisense		9	1	21225403	508
ENSMUSG00000085023	antisense	Gm12744	ENSMUST00000146976	antisense		4	-1	106589108	519
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000169933	retained_intron		19	-1	41963107	240
ENSMUSG00000058132	protein_coding	Vmn1r82	ENSMUST00000191002	protein_coding		7	1	12304802	918
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000125289	protein_coding		10	1	128232115	807
ENSMUSG00000025159	protein_coding	Mms19	ENSMUST00000169765	protein_coding		19	-1	41969741	387
ENSMUSG00000074001	protein_coding	Klhl40	ENSMUST00000098272	protein_coding	principal1	9	1	121777691	2370
ENSMUSG00000101147	unprocessed_pseudogene	Gm20818	ENSMUST00000190372	unprocessed_pseudogene		Y	1	69017824	693
ENSMUSG00000030681	protein_coding	Mvp	ENSMUST00000133172	protein_coding		7	-1	127011865	466
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000128272	retained_intron		19	1	6418738	4456
ENSMUSG00000031910	protein_coding	Has3	ENSMUST00000176144	protein_coding	principal1	8	1	106870836	4150
ENSMUSG00000046223	protein_coding	Plaur	ENSMUST00000002284	protein_coding	principal1	7	1	24462484	1506
ENSMUSG00000030681	protein_coding	Mvp	ENSMUST00000206511	retained_intron		7	-1	127014550	4822
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000236635	protein_coding	alternative2	19	1	6418765	5118
ENSMUSG00000101143	unprocessed_pseudogene	Gm21151	ENSMUST00000191536	unprocessed_pseudogene		Y	1	69092807	693
ENSMUSG00000031910	protein_coding	Has3	ENSMUST00000175987	protein_coding		8	1	106870891	1154
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000113461	protein_coding	alternative2	19	1	6418765	5505
ENSMUSG00000118170	antisense	Gm30094	ENSMUST00000237028	antisense		18	-1	65894755	694
ENSMUSG00000046223	protein_coding	Plaur	ENSMUST00000206693	retained_intron		7	1	24462485	347
ENSMUSG00000066804	protein_coding	Vmn1r83	ENSMUST00000226701	protein_coding	principal1	7	-1	12329481	2788
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000235714	protein_coding	alternative2	19	1	6427923	5001
ENSMUSG00000117748	protein_coding	Gm50241	ENSMUST00000169312	protein_coding	principal1	8	-1	106893593	2730
ENSMUSG00000066804	protein_coding	Vmn1r83	ENSMUST00000086229	protein_coding	principal1	7	-1	12322175	996
ENSMUSG00000117748	protein_coding	Gm50241	ENSMUST00000176437	processed_transcript		8	-1	106893591	369
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000137166	protein_coding	alternative2	19	1	6427937	6314
ENSMUSG00000046223	protein_coding	Plaur	ENSMUST00000205877	retained_intron		7	1	24462495	872
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000224258	protein_coding		19	1	41933480	539
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000105242	protein_coding	alternative2	10	1	128232134	4385
ENSMUSG00000046223	protein_coding	Plaur	ENSMUST00000206935	nonsense_mediated_decay		7	1	24462500	604
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000155158	processed_transcript		19	1	6428646	604
ENSMUSG00000102005	lincRNA	Gm29409	ENSMUST00000189623	lincRNA		Y	-1	69203089	901
ENSMUSG00000102005	lincRNA	Gm29409	ENSMUST00000187878	lincRNA		Y	-1	69203089	297
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000137821	protein_coding		19	1	6428646	648
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000105245	protein_coding	principal3	10	1	128238066	4402
ENSMUSG00000046223	protein_coding	Plaur	ENSMUST00000206514	nonsense_mediated_decay		7	1	24462500	1456
ENSMUSG00000015850	protein_coding	Adamtsl4	ENSMUST00000117782	protein_coding	principal1	3	-1	95687917	4036
ENSMUSG00000066803	protein_coding	Vmn1r84	ENSMUST00000086228	protein_coding	principal2	7	-1	12362764	2452
ENSMUSG00000024517	protein_coding	Grp	ENSMUST00000173985	protein_coding	principal1	18	1	65872820	969
ENSMUSG00000046223	protein_coding	Plaur	ENSMUST00000206636	retained_intron		7	1	24462500	2009
ENSMUSG00000029191	protein_coding	Rfc1	ENSMUST00000204965	protein_coding	principal3	5	-1	65335670	4751
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000135538	retained_intron		10	1	128240401	386
ENSMUSG00000045114	protein_coding	Prrt2	ENSMUST00000159916	protein_coding	principal1	7	-1	127021211	2501
ENSMUSG00000066803	protein_coding	Vmn1r84	ENSMUST00000228653	protein_coding	alternative2	7	-1	12369273	2769
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000157014	processed_transcript		19	1	6445460	739
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000135376	retained_intron		10	1	128242339	485
ENSMUSG00000066803	protein_coding	Vmn1r84	ENSMUST00000227427	protein_coding	alternative2	7	-1	12369273	2880
ENSMUSG00000039684	transcribed_processed_pseudogene	Gm5422	ENSMUST00000216161	processed_transcript		10	1	31248023	2928
ENSMUSG00000039148	protein_coding	Sart1	ENSMUST00000044207	protein_coding	principal1	19	-1	5388703	5091
ENSMUSG00000066803	protein_coding	Vmn1r84	ENSMUST00000226408	protein_coding	alternative2	7	-1	12369273	2898
ENSMUSG00000066803	protein_coding	Vmn1r84	ENSMUST00000228741	retained_intron		7	-1	12369273	5105
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000124815	processed_transcript		19	1	6446298	818
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000146945	processed_transcript		10	1	128242408	456
ENSMUSG00000039684	transcribed_processed_pseudogene	Gm5422	ENSMUST00000050717	transcribed_processed_pseudogene		10	1	31248155	2721
ENSMUSG00000066803	protein_coding	Vmn1r84	ENSMUST00000226811	processed_transcript		7	-1	12369273	2975
ENSMUSG00000020692	protein_coding	Nle1	ENSMUST00000103213	protein_coding	principal1	11	-1	82908411	1783
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000142149	retained_intron		10	1	128242629	591
ENSMUSG00000112578	lincRNA	Gm33308	ENSMUST00000217784	lincRNA		12	1	32246259	400
ENSMUSG00000039148	protein_coding	Sart1	ENSMUST00000235855	retained_intron		19	-1	5380502	360
ENSMUSG00000024517	protein_coding	Grp	ENSMUST00000025395	protein_coding	principal1	18	1	65873048	1319
ENSMUSG00000112578	lincRNA	Gm33308	ENSMUST00000218566	lincRNA		12	1	32246330	652
ENSMUSG00000015850	protein_coding	Adamtsl4	ENSMUST00000015994	protein_coding	principal1	3	-1	95687858	3856
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000142484	retained_intron		10	1	128247285	644
ENSMUSG00000020692	protein_coding	Nle1	ENSMUST00000124109	retained_intron		11	-1	82901816	539
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000150792	retained_intron		19	1	6454571	2748
ENSMUSG00000101491	lincRNA	Gm28632	ENSMUST00000191193	lincRNA		Y	-1	69244757	1499
ENSMUSG00000045114	protein_coding	Prrt2	ENSMUST00000160767	retained_intron		7	-1	127020974	2940
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000105240	processed_transcript		10	1	128247340	2320
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000140435	retained_intron		19	1	6473109	1933
ENSMUSG00000024517	protein_coding	Grp	ENSMUST00000173530	retained_intron		18	1	65873504	597
ENSMUSG00000101491	lincRNA	Gm28632	ENSMUST00000189418	lincRNA		Y	-1	69244304	438
ENSMUSG00000045114	protein_coding	Prrt2	ENSMUST00000201686	protein_coding		7	-1	127019902	181
ENSMUSG00000084169	processed_pseudogene	Gm12240	ENSMUST00000120178	processed_pseudogene		11	-1	56263083	229
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000136854	retained_intron		10	1	128249213	560
ENSMUSG00000020692	protein_coding	Nle1	ENSMUST00000167196	nonsense_mediated_decay		11	-1	82904289	738
ENSMUSG00000081749	processed_pseudogene	Gm12241	ENSMUST00000118330	processed_pseudogene		11	1	56459349	726
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000236610	processed_transcript		19	1	6490827	725
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000148391	processed_transcript		19	1	6497671	547
ENSMUSG00000039148	protein_coding	Sart1	ENSMUST00000236511	retained_intron		19	-1	5381320	494
ENSMUSG00000039994	protein_coding	Timeless	ENSMUST00000129147	retained_intron		10	1	128249619	423
ENSMUSG00000045114	protein_coding	Prrt2	ENSMUST00000161931	nonsense_mediated_decay		7	-1	127019595	816
ENSMUSG00000015850	protein_coding	Adamtsl4	ENSMUST00000151054	processed_transcript		3	-1	95677151	288
ENSMUSG00000020692	protein_coding	Nle1	ENSMUST00000140318	retained_intron		11	-1	82904268	1301
ENSMUSG00000039148	protein_coding	Sart1	ENSMUST00000237915	retained_intron		19	-1	5383246	595
ENSMUSG00000039148	protein_coding	Sart1	ENSMUST00000235654	protein_coding		19	-1	5388015	428
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000113458	protein_coding		19	1	6497828	3503
ENSMUSG00000020692	protein_coding	Nle1	ENSMUST00000170815	retained_intron		11	-1	82904636	428
ENSMUSG00000045114	protein_coding	Prrt2	ENSMUST00000201963	processed_transcript		7	-1	127020956	455
ENSMUSG00000015850	protein_coding	Adamtsl4	ENSMUST00000124410	processed_transcript		3	-1	95680096	403
ENSMUSG00000110260	lincRNA	Gm30504	ENSMUST00000209448	lincRNA		8	1	45110481	656
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000113459	protein_coding		19	1	6497835	3285
ENSMUSG00000039148	protein_coding	Sart1	ENSMUST00000235908	retained_intron		19	-1	5388587	671
ENSMUSG00000110260	lincRNA	Gm30504	ENSMUST00000209316	lincRNA		8	1	45122651	1688
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000154580	processed_transcript		19	1	6517205	576
ENSMUSG00000110260	lincRNA	Gm30504	ENSMUST00000209762	lincRNA		8	1	45186741	1048
ENSMUSG00000015850	protein_coding	Adamtsl4	ENSMUST00000148854	protein_coding		3	-1	95687865	452
ENSMUSG00000020621	protein_coding	Rdh14	ENSMUST00000020947	protein_coding	principal1	12	1	10390772	1480
ENSMUSG00000033768	protein_coding	Nrxn2	ENSMUST00000077182	protein_coding	alternative2	19	1	6418738	6059
ENSMUSG00000026775	protein_coding	Yme1l1	ENSMUST00000028117	protein_coding	principal1	2	1	23156369	4707
ENSMUSG00000052566	protein_coding	Hook2	ENSMUST00000209764	protein_coding		8	1	84990603	2516
ENSMUSG00000083737	processed_pseudogene	Prdx6-ps2	ENSMUST00000121989	processed_pseudogene		4	1	25307830	694
ENSMUSG00000112055	lincRNA	Gm48773	ENSMUST00000219684	lincRNA		10	1	13627198	242
ENSMUSG00000045114	protein_coding	Prrt2	ENSMUST00000202045	protein_coding		7	-1	127021137	429
ENSMUSG00000100353	unprocessed_pseudogene	Gm28859	ENSMUST00000186650	unprocessed_pseudogene		Y	-1	64784781	616
ENSMUSG00000052188	antisense	Gm14964	ENSMUST00000149574	antisense		19	-1	6532011	716
ENSMUSG00000029191	protein_coding	Rfc1	ENSMUST00000203471	protein_coding	alternative2	5	-1	65335618	3952
ENSMUSG00000045114	protein_coding	Prrt2	ENSMUST00000202936	processed_transcript		7	-1	127020355	657
ENSMUSG00000100624	unprocessed_pseudogene	Gm28101	ENSMUST00000187608	unprocessed_pseudogene		Y	1	69286102	697
ENSMUSG00000026775	protein_coding	Yme1l1	ENSMUST00000149240	processed_transcript		2	1	23156528	628
ENSMUSG00000101022	unprocessed_pseudogene	Gm20921	ENSMUST00000188265	unprocessed_pseudogene		Y	-1	64859337	652
ENSMUSG00000092331	unprocessed_pseudogene	Vmn1r-ps66	ENSMUST00000173436	unprocessed_pseudogene		7	-1	12392883	612
ENSMUSG00000052188	antisense	Gm14964	ENSMUST00000137184	antisense		19	-1	6531788	519
ENSMUSG00000026775	protein_coding	Yme1l1	ENSMUST00000147750	processed_transcript		2	1	23156833	563
ENSMUSG00000029191	protein_coding	Rfc1	ENSMUST00000203596	protein_coding		5	-1	65269111	638
ENSMUSG00000092610	unprocessed_pseudogene	Vmn1r-ps67	ENSMUST00000173843	unprocessed_pseudogene		7	-1	12399741	691
ENSMUSG00000093781	transcribed_unprocessed_pseudogene	Vmn1r-ps47	ENSMUST00000237666	processed_transcript		7	-1	10286840	3972
ENSMUSG00000093781	transcribed_unprocessed_pseudogene	Vmn1r-ps47	ENSMUST00000237045	processed_transcript		7	-1	10286840	2242
ENSMUSG00000026775	protein_coding	Yme1l1	ENSMUST00000134342	processed_transcript		2	1	23193074	869
ENSMUSG00000092359	unprocessed_pseudogene	Vmn1r-ps68	ENSMUST00000174638	unprocessed_pseudogene		7	-1	12404499	399
ENSMUSG00000093781	transcribed_unprocessed_pseudogene	Vmn1r-ps47	ENSMUST00000176694	transcribed_unprocessed_pseudogene		7	-1	10281703	907
ENSMUSG00000110231	lincRNA	Gm6329	ENSMUST00000209210	lincRNA		8	-1	45165219	936
ENSMUSG00000026775	protein_coding	Yme1l1	ENSMUST00000148616	processed_transcript		2	1	23168374	662
ENSMUSG00000020692	protein_coding	Nle1	ENSMUST00000126202	nonsense_mediated_decay		11	-1	82907687	696
ENSMUSG00000025731	protein_coding	Mettl26	ENSMUST00000026827	protein_coding	principal1	17	1	25875074	1243
ENSMUSG00000029191	protein_coding	Rfc1	ENSMUST00000205063	retained_intron		5	-1	65273667	1954
ENSMUSG00000112127	processed_pseudogene	Gm48886	ENSMUST00000219091	processed_pseudogene		12	1	10493500	700
ENSMUSG00000081786	processed_pseudogene	Gm11897	ENSMUST00000121976	processed_pseudogene		4	-1	25354529	828
ENSMUSG00000029191	protein_coding	Rfc1	ENSMUST00000203644	retained_intron		5	-1	65335613	485
ENSMUSG00000046691	protein_coding	Chtf8	ENSMUST00000177068	protein_coding	principal1	8	-1	106893593	2931
ENSMUSG00000034482	protein_coding	Ly6g5c	ENSMUST00000037849	protein_coding	principal1	17	1	35108279	509
ENSMUSG00000039099	protein_coding	Wdr93	ENSMUST00000035622	protein_coding	principal1	7	1	79743163	2285
ENSMUSG00000006490	protein_coding	Prl8a9	ENSMUST00000006662	protein_coding	principal1	13	-1	27564606	942
ENSMUSG00000020692	protein_coding	Nle1	ENSMUST00000147915	retained_intron		11	-1	82908342	787
ENSMUSG00000100165	transcribed_unprocessed_pseudogene	Gm28253	ENSMUST00000186071	processed_transcript		Y	-1	64890470	712
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000026154	protein_coding	principal1	19	1	41933490	1821
ENSMUSG00000100165	transcribed_unprocessed_pseudogene	Gm28253	ENSMUST00000187971	transcribed_unprocessed_pseudogene		Y	-1	64888879	615
ENSMUSG00000082451	processed_pseudogene	Gm11894	ENSMUST00000121579	processed_pseudogene		4	1	25419349	328
ENSMUSG00000108506	processed_pseudogene	Gm44705	ENSMUST00000206719	processed_pseudogene		7	-1	79790625	339
ENSMUSG00000030680	protein_coding	Pagr1a	ENSMUST00000200948	protein_coding	principal1	7	-1	127017352	1430
ENSMUSG00000046691	protein_coding	Chtf8	ENSMUST00000175940	protein_coding	principal1	8	-1	106893215	2890
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000222583	nonsense_mediated_decay		13	-1	45001647	1578
ENSMUSG00000093487	unprocessed_pseudogene	Vmn1r-ps48	ENSMUST00000176352	unprocessed_pseudogene		7	1	10300490	886
ENSMUSG00000052566	protein_coding	Hook2	ENSMUST00000064495	protein_coding	principal1	8	1	84990617	2580
ENSMUSG00000029482	protein_coding	Aacs	ENSMUST00000031445	protein_coding	principal1	5	1	125475814	3239
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000224896	protein_coding		19	1	41933522	381
ENSMUSG00000046691	protein_coding	Chtf8	ENSMUST00000176090	protein_coding		8	-1	106893515	615
ENSMUSG00000081369	processed_pseudogene	Gm11896	ENSMUST00000121105	processed_pseudogene		4	1	25538850	820
ENSMUSG00000038192	protein_coding	Cer1	ENSMUST00000048430	protein_coding	principal1	4	-1	82885148	1739
ENSMUSG00000040396	protein_coding	Abhd13	ENSMUST00000139793	protein_coding	principal1	8	1	9977707	5191
ENSMUSG00000112792	lincRNA	Gm38407	ENSMUST00000219221	lincRNA		12	1	10446388	2391
ENSMUSG00000030680	protein_coding	Pagr1a	ENSMUST00000162069	protein_coding		7	-1	127017320	422
ENSMUSG00000052566	protein_coding	Hook2	ENSMUST00000210326	protein_coding		8	1	84990642	3080
ENSMUSG00000100077	unprocessed_pseudogene	Gm21826	ENSMUST00000187451	unprocessed_pseudogene		Y	-1	64925780	696
ENSMUSG00000025731	protein_coding	Mettl26	ENSMUST00000110456	nonsense_mediated_decay		17	1	25875464	891
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000224562	protein_coding		19	1	41937603	690
ENSMUSG00000025731	protein_coding	Mettl26	ENSMUST00000236426	retained_intron		17	1	25875500	842
ENSMUSG00000105048	TEC	Gm42966	ENSMUST00000197883	TEC		5	1	44105849	1691
ENSMUSG00000029482	protein_coding	Aacs	ENSMUST00000144361	retained_intron		5	1	125506149	796
ENSMUSG00000030680	protein_coding	Pagr1a	ENSMUST00000206416	protein_coding		7	-1	127017317	558
ENSMUSG00000040396	protein_coding	Abhd13	ENSMUST00000048216	protein_coding	principal1	8	1	9977717	5074
ENSMUSG00000046691	protein_coding	Chtf8	ENSMUST00000176515	protein_coding		8	-1	106893601	694
ENSMUSG00000112792	lincRNA	Gm38407	ENSMUST00000218017	lincRNA		12	1	10526775	474
ENSMUSG00000109949	processed_pseudogene	Gm45402	ENSMUST00000211796	processed_pseudogene		7	-1	10326488	223
ENSMUSG00000090946	protein_coding	Ccdc71l	ENSMUST00000172332	protein_coding	principal1	12	1	32378704	4240
ENSMUSG00000105373	TEC	Gm42429	ENSMUST00000198579	TEC		5	1	44134393	558
ENSMUSG00000029482	protein_coding	Aacs	ENSMUST00000131355	retained_intron		5	1	125509493	527
ENSMUSG00000081789	processed_pseudogene	Gm11893	ENSMUST00000117829	processed_pseudogene		4	-1	25542281	491
ENSMUSG00000107068	protein_coding	Gm42742	ENSMUST00000032918	retained_intron		7	-1	127020327	4373
ENSMUSG00000052566	protein_coding	Hook2	ENSMUST00000209652	processed_transcript		8	1	84998491	639
ENSMUSG00000029482	protein_coding	Aacs	ENSMUST00000199978	processed_transcript		5	1	125512699	158
ENSMUSG00000102388	protein_coding	Gm33815	ENSMUST00000195574	protein_coding	principal1	Y	1	69321132	1204
ENSMUSG00000112865	lincRNA	Gm40375	ENSMUST00000218751	lincRNA		12	-1	32431923	1428
ENSMUSG00000101569	lincRNA	Gm28254	ENSMUST00000189207	lincRNA		Y	1	64939471	2166
ENSMUSG00000107068	protein_coding	Gm42742	ENSMUST00000201606	processed_transcript		7	-1	127021097	145
ENSMUSG00000098176	protein_coding	Ccdc166	ENSMUST00000183130	protein_coding	principal1	15	-1	75982442	2458
ENSMUSG00000029482	protein_coding	Aacs	ENSMUST00000196556	processed_transcript		5	1	125514197	163
ENSMUSG00000107068	protein_coding	Gm42742	ENSMUST00000202624	protein_coding		7	-1	127021039	569
ENSMUSG00000029482	protein_coding	Aacs	ENSMUST00000200286	processed_transcript		5	1	125515243	245
ENSMUSG00000003308	protein_coding	Keap1	ENSMUST00000194542	protein_coding	principal2	9	-1	21239332	3151
ENSMUSG00000030544	protein_coding	Mesp1	ENSMUST00000032760	protein_coding	principal1	7	-1	79793788	1275
ENSMUSG00000107068	protein_coding	Gm42742	ENSMUST00000161728	processed_transcript		7	-1	127021089	409
ENSMUSG00000025731	protein_coding	Mettl26	ENSMUST00000169308	protein_coding		17	1	25875501	1026
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000225968	nonsense_mediated_decay		19	1	41937668	1561
ENSMUSG00000098176	protein_coding	Ccdc166	ENSMUST00000182172	protein_coding		15	-1	75982455	2584
ENSMUSG00000025731	protein_coding	Mettl26	ENSMUST00000169085	protein_coding		17	1	25875530	324
ENSMUSG00000018844	protein_coding	Fndc8	ENSMUST00000018988	protein_coding	principal1	11	1	82892124	2166
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000224537	protein_coding		19	1	41938052	291
ENSMUSG00000107068	protein_coding	Gm42742	ENSMUST00000202798	protein_coding	principal1	7	-1	127017352	1412
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000223785	retained_intron		19	1	41938427	454
ENSMUSG00000102388	protein_coding	Gm33815	ENSMUST00000195504	processed_transcript		Y	1	69321188	1599
ENSMUSG00000003308	protein_coding	Keap1	ENSMUST00000049567	protein_coding	principal2	9	-1	21239071	3172
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000225433	retained_intron		19	1	41938460	865
ENSMUSG00000024621	protein_coding	Csf1r	ENSMUST00000025523	protein_coding	principal1	18	1	61105572	3870
ENSMUSG00000104183	TEC	1700054O19Rik	ENSMUST00000193604	TEC		14	-1	25707273	868
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000223768	retained_intron		19	1	41940004	1121
ENSMUSG00000102388	protein_coding	Gm33815	ENSMUST00000193593	nonsense_mediated_decay		Y	1	69321244	543
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000223624	retained_intron		19	1	41941370	562
ENSMUSG00000030127	protein_coding	Cops7a	ENSMUST00000112439	protein_coding		6	-1	124965538	1328
ENSMUSG00000025157	protein_coding	Zdhhc16	ENSMUST00000223802	protein_coding		19	1	41941619	202
ENSMUSG00000024621	protein_coding	Csf1r	ENSMUST00000235447	protein_coding		18	1	61105591	776
ENSMUSG00000102388	protein_coding	Gm33815	ENSMUST00000193313	processed_transcript		Y	1	69321270	653
ENSMUSG00000108276	antisense	Gm36640	ENSMUST00000203686	antisense		6	1	135289359	5934
ENSMUSG00000084766	lincRNA	Gm12714	ENSMUST00000143391	lincRNA		11	1	59898374	669
ENSMUSG00000102388	protein_coding	Gm33815	ENSMUST00000194063	processed_transcript		Y	1	69323249	324
ENSMUSG00000024621	protein_coding	Csf1r	ENSMUST00000237706	protein_coding		18	1	61105650	416
ENSMUSG00000112515	processed_pseudogene	Gm4928	ENSMUST00000219622	processed_pseudogene		12	-1	10724506	850
ENSMUSG00000003308	protein_coding	Keap1	ENSMUST00000164812	protein_coding	principal2	9	-1	21238813	3614
ENSMUSG00000085551	lincRNA	1810063I02Rik	ENSMUST00000130205	lincRNA		11	1	59921499	274
ENSMUSG00000030127	protein_coding	Cops7a	ENSMUST00000032220	protein_coding	principal1	6	-1	124965448	1817
ENSMUSG00000107768	lincRNA	Gm44275	ENSMUST00000203442	lincRNA		6	-1	135319561	2519
ENSMUSG00000030543	protein_coding	Mesp2	ENSMUST00000107394	protein_coding	principal1	7	1	79810727	1944
ENSMUSG00000108179	TEC	Gm44274	ENSMUST00000203417	TEC		6	-1	135311711	256
ENSMUSG00000030127	protein_coding	Cops7a	ENSMUST00000135645	retained_intron		6	-1	124960141	768
ENSMUSG00000024621	protein_coding	Csf1r	ENSMUST00000237485	retained_intron		18	1	61105879	2035
ENSMUSG00000003308	protein_coding	Keap1	ENSMUST00000216436	protein_coding	alternative2	9	-1	21239361	2498
ENSMUSG00000003308	protein_coding	Keap1	ENSMUST00000193982	protein_coding	principal2	9	-1	21239079	2163
ENSMUSG00000030127	protein_coding	Cops7a	ENSMUST00000129976	protein_coding		6	-1	124965290	795
ENSMUSG00000104108	antisense	Gm37876	ENSMUST00000194490	antisense		3	-1	86778653	1591
ENSMUSG00000047104	protein_coding	Pbp2	ENSMUST00000050471	protein_coding	principal1	6	-1	135310405	1279
ENSMUSG00000020017	protein_coding	Hal	ENSMUST00000129421	protein_coding	principal1	10	1	93488768	5319
ENSMUSG00000003308	protein_coding	Keap1	ENSMUST00000193247	processed_transcript		9	-1	21237193	317
ENSMUSG00000030127	protein_coding	Cops7a	ENSMUST00000129446	protein_coding		6	-1	124965408	608
ENSMUSG00000030127	protein_coding	Cops7a	ENSMUST00000148485	protein_coding		6	-1	124965207	327
ENSMUSG00000030127	protein_coding	Cops7a	ENSMUST00000149346	retained_intron		6	-1	124965512	486
ENSMUSG00000024621	protein_coding	Csf1r	ENSMUST00000115268	protein_coding	principal1	18	1	61105852	4701
ENSMUSG00000068122	protein_coding	Agtr2	ENSMUST00000089188	protein_coding	principal1	X	1	21484544	3283
ENSMUSG00000074862	protein_coding	BC025920	ENSMUST00000126940	processed_transcript		10	1	81606270	345
ENSMUSG00000068122	protein_coding	Agtr2	ENSMUST00000131150	processed_transcript		X	1	21484722	314
ENSMUSG00000024295	transcribed_unprocessed_pseudogene	Cyp4f41-ps	ENSMUST00000234360	processed_transcript		17	-1	32965698	1096
ENSMUSG00000024295	transcribed_unprocessed_pseudogene	Cyp4f41-ps	ENSMUST00000234991	processed_transcript		17	-1	32952557	655
ENSMUSG00000053856	protein_coding	Dnajc5g	ENSMUST00000202433	nonsense_mediated_decay		5	1	31106285	764
ENSMUSG00000074862	protein_coding	BC025920	ENSMUST00000119492	protein_coding	principal1	10	1	81606303	1895
ENSMUSG00000074862	protein_coding	BC025920	ENSMUST00000119753	protein_coding	principal1	10	1	81606883	1582
ENSMUSG00000074862	protein_coding	BC025920	ENSMUST00000121138	protein_coding	principal1	10	1	81606883	1611
ENSMUSG00000074862	protein_coding	BC025920	ENSMUST00000099442	protein_coding	principal1	10	1	81607025	2785
ENSMUSG00000085517	antisense	Gm12963	ENSMUST00000131846	antisense		4	-1	130047774	783
ENSMUSG00000024295	transcribed_unprocessed_pseudogene	Cyp4f41-ps	ENSMUST00000126790	transcribed_unprocessed_pseudogene		17	-1	32957868	883
ENSMUSG00000024295	transcribed_unprocessed_pseudogene	Cyp4f41-ps	ENSMUST00000234619	processed_transcript		17	-1	32965695	762
ENSMUSG00000020017	protein_coding	Hal	ENSMUST00000016031	nonsense_mediated_decay		10	1	93488803	2360
ENSMUSG00000017588	protein_coding	Krt27	ENSMUST00000017732	protein_coding	principal1	11	-1	99351104	1550
ENSMUSG00000024295	transcribed_unprocessed_pseudogene	Cyp4f41-ps	ENSMUST00000234274	processed_transcript		17	-1	32965712	897
ENSMUSG00000085517	antisense	Gm12963	ENSMUST00000147555	antisense		4	-1	130047774	649
ENSMUSG00000020017	protein_coding	Hal	ENSMUST00000132624	retained_intron		10	1	93496405	570
ENSMUSG00000110689	TEC	Gm45731	ENSMUST00000211988	TEC		8	1	104438260	1203
ENSMUSG00000024295	transcribed_unprocessed_pseudogene	Cyp4f41-ps	ENSMUST00000234365	processed_transcript		17	-1	32965718	308
ENSMUSG00000043807	protein_coding	Ly6g5b	ENSMUST00000172854	protein_coding	alternative2	17	-1	35115428	1176
ENSMUSG00000081624	processed_pseudogene	Gm6912	ENSMUST00000117218	processed_pseudogene		16	1	47074198	544
ENSMUSG00000085517	antisense	Gm12963	ENSMUST00000156271	antisense		4	-1	130028504	388
ENSMUSG00000020017	protein_coding	Hal	ENSMUST00000152883	processed_transcript		10	1	93501125	851
ENSMUSG00000116928	processed_pseudogene	Gm18169	ENSMUST00000232587	processed_pseudogene		16	1	47212370	526
ENSMUSG00000053856	protein_coding	Dnajc5g	ENSMUST00000201740	protein_coding	alternative2	5	1	31108307	581
ENSMUSG00000053856	protein_coding	Dnajc5g	ENSMUST00000202760	nonsense_mediated_decay		5	1	31108317	670
ENSMUSG00000116952	processed_pseudogene	Gm6914	ENSMUST00000231847	processed_pseudogene		16	1	47620504	1188
ENSMUSG00000078302	protein_coding	Foxd1	ENSMUST00000105098	protein_coding	principal1	13	1	98354242	5064
ENSMUSG00000043807	protein_coding	Ly6g5b	ENSMUST00000062657	protein_coding	principal2	17	-1	35115428	1046
ENSMUSG00000020585	protein_coding	Laptm4a	ENSMUST00000020909	protein_coding	principal1	12	1	8921664	1773
ENSMUSG00000067716	processed_pseudogene	Gm7275	ENSMUST00000088296	processed_pseudogene		16	1	48072997	1186
ENSMUSG00000014074	protein_coding	Rnf168	ENSMUST00000155649	processed_transcript		16	1	32277459	1249
ENSMUSG00000062327	protein_coding	T	ENSMUST00000074667	protein_coding	principal1	17	1	8434423	2046
ENSMUSG00000030353	protein_coding	Tead4	ENSMUST00000130454	protein_coding		6	-1	128275577	1718
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000222990	nonsense_mediated_decay		13	-1	45001825	1447
ENSMUSG00000062327	protein_coding	T	ENSMUST00000136922	protein_coding		17	1	8434925	681
ENSMUSG00000081641	processed_pseudogene	Gm9439	ENSMUST00000119554	processed_pseudogene		X	1	21504054	973
ENSMUSG00000110255	unprocessed_pseudogene	Gm45400	ENSMUST00000211603	unprocessed_pseudogene		7	1	10344746	653
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000026865	protein_coding	principal2	3	1	41555731	5481
ENSMUSG00000031070	protein_coding	Mrgprf	ENSMUST00000033386	protein_coding	principal1	7	1	145300828	2087
ENSMUSG00000101184	processed_pseudogene	Gm28861	ENSMUST00000189681	processed_pseudogene		Y	1	64944223	315
ENSMUSG00000053856	protein_coding	Dnajc5g	ENSMUST00000066544	protein_coding	principal3	5	1	31108319	1565
ENSMUSG00000062327	protein_coding	T	ENSMUST00000177118	protein_coding		17	1	8435411	761
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000194181	protein_coding		3	1	41555741	542
ENSMUSG00000002741	protein_coding	Ykt6	ENSMUST00000002818	protein_coding	principal1	11	1	5955693	2541
ENSMUSG00000031070	protein_coding	Mrgprf	ENSMUST00000117718	protein_coding		7	1	145300899	1935
ENSMUSG00000110098	processed_pseudogene	Gm45401	ENSMUST00000209456	processed_pseudogene		7	-1	10356182	733
ENSMUSG00000104299	TEC	Gm9924	ENSMUST00000191780	TEC		5	1	31094986	2309
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000195846	protein_coding		3	1	41555760	543
ENSMUSG00000104299	TEC	Gm9924	ENSMUST00000192760	TEC		5	1	31094984	2311
ENSMUSG00000099386	unprocessed_pseudogene	Gm28255	ENSMUST00000187101	unprocessed_pseudogene		Y	1	64980714	694
ENSMUSG00000002741	protein_coding	Ykt6	ENSMUST00000143834	processed_transcript		11	1	5959304	791
ENSMUSG00000030353	protein_coding	Tead4	ENSMUST00000006311	protein_coding		6	-1	128300813	3076
ENSMUSG00000014074	protein_coding	Rnf168	ENSMUST00000014218	protein_coding	alternative2	16	1	32277461	3932
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000163764	protein_coding	principal2	3	1	41563369	5584
ENSMUSG00000103809	TEC	Gm37061	ENSMUST00000195066	TEC		1	-1	68761727	3243
ENSMUSG00000014074	protein_coding	Rnf168	ENSMUST00000171474	protein_coding	principal2	16	1	32277461	4460
ENSMUSG00000030353	protein_coding	Tead4	ENSMUST00000112157	protein_coding		6	-1	128300813	1909
ENSMUSG00000051207	protein_coding	Mrgprd	ENSMUST00000062163	protein_coding	principal1	7	1	145314835	3144
ENSMUSG00000104508	TEC	Gm37735	ENSMUST00000193995	TEC		1	-1	68640829	1406
ENSMUSG00000031552	protein_coding	Adam18	ENSMUST00000033957	protein_coding	principal1	8	-1	24674755	2361
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000220555	protein_coding	alternative2	13	-1	45001834	1589
ENSMUSG00000031552	protein_coding	Adam18	ENSMUST00000138232	protein_coding		8	-1	24628254	301
ENSMUSG00000030353	protein_coding	Tead4	ENSMUST00000133118	protein_coding	principal5	6	-1	128300823	520
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000221413	nonsense_mediated_decay		13	-1	45001861	1804
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000193080	processed_transcript		3	1	41563411	434
ENSMUSG00000031552	protein_coding	Adam18	ENSMUST00000173833	nonsense_mediated_decay		8	-1	24674728	2181
ENSMUSG00000106564	processed_pseudogene	Gm8969	ENSMUST00000199694	processed_pseudogene		3	1	89820998	526
ENSMUSG00000030353	protein_coding	Tead4	ENSMUST00000143004	protein_coding	alternative2	6	-1	128300738	368
ENSMUSG00000068397	processed_pseudogene	Gm10240	ENSMUST00000089785	processed_pseudogene		15	1	68309819	483
ENSMUSG00000095262	processed_pseudogene	Gm21893	ENSMUST00000179119	processed_pseudogene		6	1	128294102	397
ENSMUSG00000039330	protein_coding	Tsga10ip	ENSMUST00000235569	protein_coding	principal1	19	-1	5402526	1726
ENSMUSG00000021327	protein_coding	Zkscan3	ENSMUST00000070785	protein_coding	principal1	13	-1	21402713	2561
ENSMUSG00000112054	lincRNA	Gm33680	ENSMUST00000219336	lincRNA		12	1	45466273	576
ENSMUSG00000034071	protein_coding	Zfp551	ENSMUST00000080348	protein_coding	principal1	7	-1	12422751	2591
ENSMUSG00000091031	unprocessed_pseudogene	Gm17063	ENSMUST00000168135	unprocessed_pseudogene		14	-1	42027672	456
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000170711	protein_coding	principal2	3	1	41563607	2896
ENSMUSG00000103537	processed_pseudogene	Gm37838	ENSMUST00000194464	processed_pseudogene		12	-1	114189000	312
ENSMUSG00000039330	protein_coding	Tsga10ip	ENSMUST00000044527	protein_coding		19	-1	5394401	487
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000131229	protein_coding		2	1	32599709	1013
ENSMUSG00000021327	protein_coding	Zkscan3	ENSMUST00000223831	protein_coding		13	-1	21402731	2101
ENSMUSG00000104324	TEC	Gm37320	ENSMUST00000192781	TEC		15	-1	68326333	4953
ENSMUSG00000112054	lincRNA	Gm33680	ENSMUST00000219411	lincRNA		12	1	45466293	3401
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000072329	protein_coding	principal2	13	-1	45002147	1362
ENSMUSG00000090772	unprocessed_pseudogene	Gm2930	ENSMUST00000170403	unprocessed_pseudogene		14	-1	42040012	474
ENSMUSG00000112054	lincRNA	Gm33680	ENSMUST00000219610	lincRNA		12	1	45466296	4117
ENSMUSG00000053600	protein_coding	Zfp472	ENSMUST00000039132	protein_coding	principal1	17	1	32965814	2376
ENSMUSG00000091116	unprocessed_pseudogene	Gm7991	ENSMUST00000168668	unprocessed_pseudogene		14	1	42067059	591
ENSMUSG00000020152	protein_coding	Actr2	ENSMUST00000000137	protein_coding	principal1	11	-1	20112913	3631
ENSMUSG00000034071	protein_coding	Zfp551	ENSMUST00000120220	protein_coding		7	-1	12422589	2195
ENSMUSG00000094029	IG_V_gene	Ighv3-3	ENSMUST00000191693	IG_V_gene		12	-1	114196875	350
ENSMUSG00000094029	IG_V_gene	Ighv3-3	ENSMUST00000103476	IG_V_gene	principal1	12	-1	114196734	296
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000168086	protein_coding	principal2	3	1	41564854	4790
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000221393	retained_intron		13	-1	44982997	1082
ENSMUSG00000053600	protein_coding	Zfp472	ENSMUST00000234770	protein_coding		17	1	32965845	381
ENSMUSG00000084297	processed_pseudogene	Gm13755	ENSMUST00000118509	processed_pseudogene		2	1	80890106	305
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000222321	processed_transcript		13	-1	44947144	797
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000194348	processed_transcript		3	1	41564898	382
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000223265	nonsense_mediated_decay		13	-1	44970140	676
ENSMUSG00000081566	processed_pseudogene	Gm13756	ENSMUST00000117618	processed_pseudogene		2	-1	80909355	222
ENSMUSG00000021327	protein_coding	Zkscan3	ENSMUST00000116434	protein_coding	principal1	13	-1	21402755	2600
ENSMUSG00000034071	protein_coding	Zfp551	ENSMUST00000123877	nonsense_mediated_decay		7	-1	12422439	375
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000140983	protein_coding		2	1	32599726	875
ENSMUSG00000020152	protein_coding	Actr2	ENSMUST00000132022	processed_transcript		11	-1	20112867	2087
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000222805	protein_coding		13	-1	45002091	1231
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000191952	protein_coding	alternative2	3	1	41564920	3327
ENSMUSG00000066632	processed_pseudogene	Pgk1-rs7	ENSMUST00000085735	processed_pseudogene		12	-1	10900240	1255
ENSMUSG00000021327	protein_coding	Zkscan3	ENSMUST00000145631	processed_transcript		13	-1	21394763	436
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000223524	nonsense_mediated_decay		13	-1	45002052	550
ENSMUSG00000021327	protein_coding	Zkscan3	ENSMUST00000224820	protein_coding		13	-1	21402755	5398
ENSMUSG00000111928	processed_pseudogene	Gm48082	ENSMUST00000220310	processed_pseudogene		12	1	10990354	3842
ENSMUSG00000020152	protein_coding	Actr2	ENSMUST00000134779	retained_intron		11	-1	20112909	452
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000195200	retained_intron		3	1	41580856	487
ENSMUSG00000032523	protein_coding	Hhatl	ENSMUST00000035110	protein_coding	principal1	9	-1	121792507	1870
ENSMUSG00000076668	IG_V_gene	Ighv7-4	ENSMUST00000192499	IG_V_gene	principal5	12	-1	114223328	437
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000095045	protein_coding	alternative1	2	1	32607011	2536
ENSMUSG00000076668	IG_V_gene	Ighv7-4	ENSMUST00000103477	IG_V_gene	alternative2	12	-1	114223254	360
ENSMUSG00000021327	protein_coding	Zkscan3	ENSMUST00000117721	protein_coding		13	-1	21402695	5788
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000195322	retained_intron		3	1	41591673	718
ENSMUSG00000103939	IG_V_gene	Ighv3-4	ENSMUST00000193408	IG_V_gene	principal1	12	-1	114254051	353
ENSMUSG00000021327	protein_coding	Zkscan3	ENSMUST00000116433	protein_coding		13	-1	21402716	1421
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000191921	retained_intron		3	1	41593773	774
ENSMUSG00000021327	protein_coding	Zkscan3	ENSMUST00000151467	processed_transcript		13	-1	21402670	674
ENSMUSG00000057531	protein_coding	Dtnbp1	ENSMUST00000110128	protein_coding	alternative2	13	-1	45002096	1305
ENSMUSG00000032523	protein_coding	Hhatl	ENSMUST00000163981	protein_coding	principal1	9	-1	121791120	1744
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000192451	protein_coding		3	1	41596667	491
ENSMUSG00000055373	protein_coding	Fut9	ENSMUST00000084770	protein_coding	principal1	4	-1	25800146	12134
ENSMUSG00000076670	IG_V_gene	Ighv3-5	ENSMUST00000195619	IG_V_gene		12	-1	114263087	353
ENSMUSG00000097012	unprocessed_pseudogene	Gm16531	ENSMUST00000180658	unprocessed_pseudogene		10	1	22414514	967
ENSMUSG00000025764	protein_coding	Jade1	ENSMUST00000192300	processed_transcript		3	1	41602430	449
ENSMUSG00000076670	IG_V_gene	Ighv3-5	ENSMUST00000103479	IG_V_gene	principal1	12	-1	114262950	299
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000183156	protein_coding	principal1	10	1	89873509	4248
ENSMUSG00000032523	protein_coding	Hhatl	ENSMUST00000214768	protein_coding		9	-1	121791346	652
ENSMUSG00000108671	TEC	2700080J24Rik	ENSMUST00000205314	TEC		7	-1	16891067	1662
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182936	protein_coding		10	1	89873538	1822
ENSMUSG00000032523	protein_coding	Hhatl	ENSMUST00000215910	protein_coding		9	-1	121791086	398
ENSMUSG00000046280	protein_coding	She	ENSMUST00000050401	protein_coding	principal1	3	1	89831370	5733
ENSMUSG00000032523	protein_coding	Hhatl	ENSMUST00000215477	protein_coding		9	-1	121791087	391
ENSMUSG00000097473	processed_pseudogene	Gm26585	ENSMUST00000180890	processed_pseudogene		10	-1	22453520	630
ENSMUSG00000055373	protein_coding	Fut9	ENSMUST00000108199	protein_coding	principal1	4	-1	25800244	2579
ENSMUSG00000118467	unitary_pseudogene	Gm50481	ENSMUST00000238543	unitary_pseudogene		13	1	21412051	1105
ENSMUSG00000032523	protein_coding	Hhatl	ENSMUST00000217652	protein_coding		9	-1	121791854	409
ENSMUSG00000055373	protein_coding	Fut9	ENSMUST00000149875	processed_transcript		4	-1	25799855	1859
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000122846	retained_intron		4	-1	141022124	2186
ENSMUSG00000024622	protein_coding	Hmgxb3	ENSMUST00000091884	protein_coding	principal2	18	-1	61177050	5103
ENSMUSG00000105936	TEC	Gm43544	ENSMUST00000196474	TEC		1	1	139070213	2472
ENSMUSG00000046280	protein_coding	She	ENSMUST00000197454	retained_intron		3	1	89837889	1489
ENSMUSG00000081648	processed_pseudogene	Gm13423	ENSMUST00000117205	processed_pseudogene		2	1	23202033	888
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000095044	protein_coding	principal3	2	1	32607026	2394
ENSMUSG00000095103	unprocessed_pseudogene	Gm21171	ENSMUST00000180048	unprocessed_pseudogene		Y	-1	65068377	673
ENSMUSG00000104900	sense_intronic	4930596I21Rik	ENSMUST00000200494	sense_intronic		1	1	138977656	461
ENSMUSG00000033658	protein_coding	Ddx19b	ENSMUST00000040241	protein_coding	principal1	8	-1	111027764	6612
ENSMUSG00000096967	processed_transcript	Gm26621	ENSMUST00000194661	TEC		15	-1	68337430	2716
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000054865	protein_coding	principal2	5	-1	5664239	4956
ENSMUSG00000102626	processed_pseudogene	Gm18553	ENSMUST00000194152	processed_pseudogene		1	-1	138984497	634
ENSMUSG00000096967	processed_transcript	Gm26621	ENSMUST00000180413	processed_transcript		15	-1	68337410	700
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000183538	nonsense_mediated_decay		2	1	32607040	2361
ENSMUSG00000085481	processed_pseudogene	Gm16304	ENSMUST00000129972	processed_pseudogene		1	-1	139134665	775
ENSMUSG00000102157	TEC	Gm37470	ENSMUST00000193378	TEC		1	1	139030185	2798
ENSMUSG00000033658	protein_coding	Ddx19b	ENSMUST00000065784	protein_coding		8	-1	111031751	3104
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000196165	protein_coding	alternative2	5	-1	5664208	4408
ENSMUSG00000028599	protein_coding	Tnfrsf1b	ENSMUST00000030336	protein_coding	principal1	4	-1	145246870	3818
ENSMUSG00000085361	processed_pseudogene	Gm16305	ENSMUST00000140747	processed_pseudogene		1	-1	138992069	556
ENSMUSG00000095785	protein_coding	Gm20924	ENSMUST00000186910	protein_coding	principal1	Y	-1	65207527	1230
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000126636	protein_coding		2	1	32607043	438
ENSMUSG00000095785	protein_coding	Gm20924	ENSMUST00000177663	protein_coding	principal1	Y	-1	65206008	684
ENSMUSG00000092042	antisense	Gm17163	ENSMUST00000152043	antisense		9	1	121820289	432
ENSMUSG00000090462	transcribed_processed_pseudogene	1700091H14Rik	ENSMUST00000185725	processed_transcript		14	-1	42095277	1388
ENSMUSG00000098113	processed_pseudogene	Gm2445	ENSMUST00000182798	processed_pseudogene		13	-1	98403083	989
ENSMUSG00000083835	processed_pseudogene	Gm11898	ENSMUST00000117161	processed_pseudogene		4	-1	25854899	385
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000149220	retained_intron		2	1	32608085	2322
ENSMUSG00000028599	protein_coding	Tnfrsf1b	ENSMUST00000143055	nonsense_mediated_decay		4	-1	145246870	375
ENSMUSG00000090462	transcribed_processed_pseudogene	1700091H14Rik	ENSMUST00000167772	transcribed_processed_pseudogene		14	-1	42095245	590
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000081879	protein_coding		2	1	32608464	2345
ENSMUSG00000084018	processed_pseudogene	Gm11895	ENSMUST00000122165	processed_pseudogene		4	-1	25868455	467
ENSMUSG00000047867	protein_coding	Gimap6	ENSMUST00000053661	protein_coding	principal1	6	-1	48708225	1594
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000129165	protein_coding		2	1	32608717	355
ENSMUSG00000099446	lincRNA	2310005E17Rik	ENSMUST00000186644	lincRNA		13	-1	98435065	1187
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000151455	retained_intron		4	-1	141029175	3407
ENSMUSG00000116587	lincRNA	Gm49753	ENSMUST00000232641	lincRNA		17	1	19257930	710
ENSMUSG00000104116	TEC	Gm37296	ENSMUST00000192728	TEC		15	-1	68341216	2922
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000143625	protein_coding		2	1	32609013	414
ENSMUSG00000100416	lincRNA	Gm29501	ENSMUST00000186133	lincRNA		13	-1	98477459	530
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000199314	processed_transcript		5	-1	5622179	2189
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000155048	protein_coding		5	-1	5582501	389
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000128811	protein_coding		2	1	32609043	584
ENSMUSG00000093387	lincRNA	Gm20732	ENSMUST00000175699	lincRNA		15	-1	68363176	686
ENSMUSG00000093776	unprocessed_pseudogene	Vmn2r-ps120	ENSMUST00000176341	unprocessed_pseudogene		17	1	19279322	2409
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000124734	protein_coding		5	-1	5587211	579
ENSMUSG00000047867	protein_coding	Gimap6	ENSMUST00000119315	protein_coding		6	-1	48708213	3179
ENSMUSG00000092116	protein_coding	Gm10320	ENSMUST00000170205	protein_coding	principal1	13	-1	98492001	527
ENSMUSG00000116670	unprocessed_pseudogene	Gm49752	ENSMUST00000232310	unprocessed_pseudogene		17	1	19277337	630
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000148347	protein_coding		5	-1	5617289	1462
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000113290	protein_coding	alternative1	2	1	32606961	2402
ENSMUSG00000047867	protein_coding	Gimap6	ENSMUST00000126422	protein_coding		6	-1	48708196	425
ENSMUSG00000025194	protein_coding	Abcc2	ENSMUST00000026208	protein_coding	principal1	19	1	43782192	8027
ENSMUSG00000112044	processed_pseudogene	Gm48184	ENSMUST00000218141	processed_pseudogene		10	-1	104874484	273
ENSMUSG00000103775	TEC	Gm36997	ENSMUST00000195090	TEC		10	-1	105142942	707
ENSMUSG00000026811	protein_coding	St6galnac6	ENSMUST00000072111	protein_coding	principal3	2	1	32608071	2277
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000132510	nonsense_mediated_decay		5	-1	5664043	2080
ENSMUSG00000104430	TEC	Gm37425	ENSMUST00000193184	TEC		13	-1	98517938	432
ENSMUSG00000047867	protein_coding	Gimap6	ENSMUST00000132725	processed_transcript		6	-1	48706236	389
ENSMUSG00000024622	protein_coding	Hmgxb3	ENSMUST00000235236	processed_transcript		18	-1	61159805	4319
ENSMUSG00000095490	protein_coding	Gm7951	ENSMUST00000171388	protein_coding	principal1	14	-1	42117369	1408
ENSMUSG00000025194	protein_coding	Abcc2	ENSMUST00000143553	retained_intron		19	1	43782326	566
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000061008	protein_coding		5	-1	5664208	1906
ENSMUSG00000024622	protein_coding	Hmgxb3	ENSMUST00000235480	protein_coding	alternative2	18	-1	61176997	5131
ENSMUSG00000025194	protein_coding	Abcc2	ENSMUST00000129943	retained_intron		19	1	43797986	607
ENSMUSG00000108197	lincRNA	Gm44214	ENSMUST00000204153	lincRNA		6	-1	86688428	606
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000103198	protein_coding	principal1	2	1	130274430	1877
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000135252	protein_coding	alternative2	5	-1	5664232	2188
ENSMUSG00000024622	protein_coding	Hmgxb3	ENSMUST00000236068	nonsense_mediated_decay		18	-1	61177033	4597
ENSMUSG00000025194	protein_coding	Abcc2	ENSMUST00000146737	retained_intron		19	1	43810522	531
ENSMUSG00000025194	protein_coding	Abcc2	ENSMUST00000099413	protein_coding		19	1	43838803	1926
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000150140	retained_intron		5	-1	5626095	293
ENSMUSG00000105941	antisense	Gm42809	ENSMUST00000198429	antisense		3	1	89912916	1138
ENSMUSG00000024622	protein_coding	Hmgxb3	ENSMUST00000237101	nonsense_mediated_decay		18	-1	61137479	776
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000198121	retained_intron		5	-1	5664227	2920
ENSMUSG00000040473	protein_coding	Cfap69	ENSMUST00000148193	protein_coding		5	-1	5663292	357
ENSMUSG00000063594	protein_coding	Gng8	ENSMUST00000078182	protein_coding	principal1	7	1	16891786	910
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000150745	retained_intron		2	1	130274444	3627
ENSMUSG00000086070	lincRNA	8430436N08Rik	ENSMUST00000129988	lincRNA		4	1	7560688	1077
ENSMUSG00000063594	protein_coding	Gng8	ENSMUST00000205716	protein_coding	principal1	7	1	16892212	432
ENSMUSG00000024914	protein_coding	Drap1	ENSMUST00000124478	retained_intron		19	-1	5423923	674
ENSMUSG00000024622	protein_coding	Hmgxb3	ENSMUST00000237443	retained_intron		18	-1	61177028	3410
ENSMUSG00000024622	protein_coding	Hmgxb3	ENSMUST00000237535	processed_transcript		18	-1	61167629	755
ENSMUSG00000096686	protein_coding	Gm20830	ENSMUST00000190426	protein_coding	principal1	Y	-1	6918282	1221
ENSMUSG00000096686	protein_coding	Gm20830	ENSMUST00000178016	protein_coding	principal1	Y	-1	6917117	684
ENSMUSG00000024622	protein_coding	Hmgxb3	ENSMUST00000235663	retained_intron		18	-1	61163413	697
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182907	nonsense_mediated_decay		10	1	89873638	2517
ENSMUSG00000082024	processed_pseudogene	Gm11794	ENSMUST00000119446	processed_pseudogene		4	-1	7763500	237
ENSMUSG00000024622	protein_coding	Hmgxb3	ENSMUST00000237498	retained_intron		18	-1	61177028	4179
ENSMUSG00000085630	lincRNA	Gm11795	ENSMUST00000127180	lincRNA		4	1	7759670	396
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000161543	retained_intron		2	1	130274446	2960
ENSMUSG00000063594	protein_coding	Gng8	ENSMUST00000205459	protein_coding	principal1	7	1	16892271	522
ENSMUSG00000099505	lincRNA	Gm28442	ENSMUST00000187052	lincRNA		Y	1	6952407	174
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000136621	protein_coding		2	1	130274455	868
ENSMUSG00000036052	protein_coding	Dnajb5	ENSMUST00000037872	protein_coding		4	1	42949814	3291
ENSMUSG00000083068	processed_pseudogene	Gm11800	ENSMUST00000120050	processed_pseudogene		4	1	8118620	579
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000183002	processed_transcript		10	1	89996543	226
ENSMUSG00000050343	protein_coding	Olfr1378	ENSMUST00000213259	protein_coding	principal1	11	1	50966530	4324
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000141872	protein_coding		2	1	130274492	518
ENSMUSG00000063594	protein_coding	Gng8	ENSMUST00000205598	processed_transcript		7	1	16892321	719
ENSMUSG00000050343	protein_coding	Olfr1378	ENSMUST00000052285	protein_coding	principal1	11	1	50969020	948
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000183012	processed_transcript		10	1	90046622	415
ENSMUSG00000063594	protein_coding	Gng8	ENSMUST00000205838	retained_intron		7	1	16894647	583
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000138163	retained_intron		2	1	130274831	350
ENSMUSG00000100161	lincRNA	Gm28445	ENSMUST00000187686	lincRNA		Y	1	6974976	1498
ENSMUSG00000027947	protein_coding	Il6ra	ENSMUST00000197679	protein_coding	alternative2	3	-1	89913196	8639
ENSMUSG00000063594	protein_coding	Gng8	ENSMUST00000206998	retained_intron		7	1	16894945	419
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000160183	retained_intron		2	1	130275796	320
ENSMUSG00000102039	unprocessed_pseudogene	Gm20788	ENSMUST00000190538	unprocessed_pseudogene		Y	-1	7028007	697
ENSMUSG00000102373	TEC	9530018H14Rik	ENSMUST00000192253	TEC		6	-1	52257460	1243
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000183109	protein_coding		10	1	90071111	2661
ENSMUSG00000101913	lincRNA	Gm28999	ENSMUST00000188063	lincRNA		Y	1	7085143	1498
ENSMUSG00000082074	processed_pseudogene	Gm12661	ENSMUST00000118780	processed_pseudogene		11	1	50976730	3335
ENSMUSG00000027947	protein_coding	Il6ra	ENSMUST00000029559	protein_coding	principal3	3	-1	89913162	3343
ENSMUSG00000091757	unprocessed_pseudogene	Gm17064	ENSMUST00000167690	unprocessed_pseudogene		14	-1	42148119	452
ENSMUSG00000109498	TEC	Gm45222	ENSMUST00000207029	TEC		7	1	90145948	4307
ENSMUSG00000116367	processed_pseudogene	Gm49414	ENSMUST00000230783	processed_pseudogene		15	-1	68611707	298
ENSMUSG00000022848	protein_coding	Slc49a4	ENSMUST00000023554	protein_coding	principal1	16	-1	35769356	5395
ENSMUSG00000116089	processed_pseudogene	Gm7859	ENSMUST00000229163	processed_pseudogene		15	-1	68715763	755
ENSMUSG00000029151	protein_coding	Slc30a3	ENSMUST00000031037	protein_coding	principal1	5	-1	31093615	2089
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000149955	nonsense_mediated_decay		2	1	130276159	829
ENSMUSG00000038203	protein_coding	Hoxa13	ENSMUST00000147595	protein_coding	principal5	6	-1	52260803	2395
ENSMUSG00000022848	protein_coding	Slc49a4	ENSMUST00000149892	nonsense_mediated_decay		16	-1	35769330	1789
ENSMUSG00000036052	protein_coding	Dnajb5	ENSMUST00000098112	protein_coding	principal1	4	1	42949867	3093
ENSMUSG00000093926	protein_coding	Gm17027	ENSMUST00000171202	protein_coding	principal1	14	-1	42162622	1403
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000160976	retained_intron		2	1	130276300	571
ENSMUSG00000079235	protein_coding	Ccdc13	ENSMUST00000135986	protein_coding	principal1	9	-1	121839461	2640
ENSMUSG00000116294	lincRNA	Gm49415	ENSMUST00000229768	lincRNA		15	1	68755500	1292
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182356	protein_coding		10	1	90575727	7561
ENSMUSG00000036052	protein_coding	Dnajb5	ENSMUST00000123501	processed_transcript		4	1	42949914	360
ENSMUSG00000029151	protein_coding	Slc30a3	ENSMUST00000202740	protein_coding		5	-1	31108237	1989
ENSMUSG00000038203	protein_coding	Hoxa13	ENSMUST00000174763	processed_transcript		6	-1	52260802	769
ENSMUSG00000090476	unprocessed_pseudogene	Gm17166	ENSMUST00000172006	unprocessed_pseudogene		14	-1	42178006	431
ENSMUSG00000038203	protein_coding	Hoxa13	ENSMUST00000172961	processed_transcript		6	-1	52260802	766
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000162063	retained_intron		2	1	130276475	741
ENSMUSG00000115928	processed_pseudogene	Gm18930	ENSMUST00000230471	processed_pseudogene		15	1	68762491	1763
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182427	protein_coding		10	1	90576252	914
ENSMUSG00000038203	protein_coding	Hoxa13	ENSMUST00000173368	processed_transcript		6	-1	52260802	766
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000043674	protein_coding	principal1	17	-1	35667592	4425
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000143547	nonsense_mediated_decay		2	1	130276597	600
ENSMUSG00000029151	protein_coding	Slc30a3	ENSMUST00000201783	protein_coding		5	-1	31088356	407
ENSMUSG00000086681	antisense	Gm16178	ENSMUST00000129408	antisense		8	-1	61194648	677
ENSMUSG00000036052	protein_coding	Dnajb5	ENSMUST00000142332	retained_intron		4	1	42950351	5052
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182053	protein_coding		10	1	90576377	1649
ENSMUSG00000079235	protein_coding	Ccdc13	ENSMUST00000155511	nonsense_mediated_decay		9	-1	121810164	1000
ENSMUSG00000109693	TEC	Gm45483	ENSMUST00000209845	TEC		8	1	61075365	1682
ENSMUSG00000029151	protein_coding	Slc30a3	ENSMUST00000202731	nonsense_mediated_decay		5	-1	31093469	386
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000161025	retained_intron		2	1	130276665	445
ENSMUSG00000080956	processed_pseudogene	Gm16179	ENSMUST00000120685	processed_pseudogene		8	-1	61112502	373
ENSMUSG00000036052	protein_coding	Dnajb5	ENSMUST00000084662	protein_coding	principal1	4	1	42950396	3302
ENSMUSG00000029151	protein_coding	Slc30a3	ENSMUST00000200906	protein_coding		5	-1	31094801	806
ENSMUSG00000109708	TEC	Gm45809	ENSMUST00000211661	TEC		8	1	61050049	3894
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000146454	protein_coding		2	1	130276717	1490
ENSMUSG00000110046	TEC	Gm45484	ENSMUST00000210310	TEC		8	1	61024131	1141
ENSMUSG00000029151	protein_coding	Slc30a3	ENSMUST00000201396	protein_coding		5	-1	31108218	586
ENSMUSG00000029759	protein_coding	Pon3	ENSMUST00000129344	nonsense_mediated_decay		6	-1	5256233	2014
ENSMUSG00000038203	protein_coding	Hoxa13	ENSMUST00000047993	protein_coding	alternative2	6	-1	52260880	1309
ENSMUSG00000079235	protein_coding	Ccdc13	ENSMUST00000126851	retained_intron		9	-1	121810310	760
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000153353	retained_intron		2	1	130277089	1204
ENSMUSG00000036052	protein_coding	Dnajb5	ENSMUST00000153807	processed_transcript		4	1	42950440	666
ENSMUSG00000112171	processed_pseudogene	Gm17820	ENSMUST00000220213	processed_pseudogene		12	-1	32487418	1068
ENSMUSG00000068697	protein_coding	Myoz1	ENSMUST00000090469	protein_coding	principal1	14	-1	20656540	1289
ENSMUSG00000079235	protein_coding	Ccdc13	ENSMUST00000142783	protein_coding		9	-1	121810146	969
ENSMUSG00000112617	processed_pseudogene	Gm47937	ENSMUST00000220414	processed_pseudogene		12	-1	32673294	115
ENSMUSG00000036052	protein_coding	Dnajb5	ENSMUST00000107973	protein_coding	principal1	4	1	42953094	2300
ENSMUSG00000112218	processed_pseudogene	Gm18726	ENSMUST00000218175	processed_pseudogene		12	1	32710161	2010
ENSMUSG00000079235	protein_coding	Ccdc13	ENSMUST00000140929	retained_intron		9	-1	121810249	477
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000028890	protein_coding		2	1	130277157	946
ENSMUSG00000068697	protein_coding	Myoz1	ENSMUST00000224472	retained_intron		14	-1	20650718	405
ENSMUSG00000038203	protein_coding	Hoxa13	ENSMUST00000114416	protein_coding		6	-1	52260802	769
ENSMUSG00000068697	protein_coding	Myoz1	ENSMUST00000225231	processed_transcript		14	-1	20651708	346
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000150401	nonsense_mediated_decay		2	1	130277218	1005
ENSMUSG00000068697	protein_coding	Myoz1	ENSMUST00000224436	retained_intron		14	-1	20656462	607
ENSMUSG00000062209	protein_coding	Erbb4	ENSMUST00000119142	protein_coding	principal1	1	-1	69107756	11782
ENSMUSG00000026774	protein_coding	Potegl	ENSMUST00000028113	protein_coding	principal1	2	1	23207476	1842
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000133351	retained_intron		2	1	130277222	833
ENSMUSG00000062209	protein_coding	Erbb4	ENSMUST00000121473	protein_coding		1	-1	69108059	12037
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000159373	protein_coding		2	1	130277315	405
ENSMUSG00000062209	protein_coding	Erbb4	ENSMUST00000153432	protein_coding		1	-1	69107756	2196
ENSMUSG00000026774	protein_coding	Potegl	ENSMUST00000114505	protein_coding		2	1	23207497	1392
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182113	protein_coding		10	1	90576517	3553
ENSMUSG00000084098	processed_pseudogene	Gm13422	ENSMUST00000118834	processed_pseudogene		2	1	23235236	504
ENSMUSG00000027405	protein_coding	Nop56	ENSMUST00000145335	retained_intron		2	1	130277711	779
ENSMUSG00000062209	protein_coding	Erbb4	ENSMUST00000131148	processed_transcript		1	-1	68298318	240
ENSMUSG00000029513	protein_coding	Prkab1	ENSMUST00000031486	protein_coding	principal1	5	-1	116024462	2089
ENSMUSG00000102857	unprocessed_pseudogene	Gm37085	ENSMUST00000193780	unprocessed_pseudogene		3	-1	94012965	196
ENSMUSG00000035770	protein_coding	Dync1li2	ENSMUST00000041769	protein_coding	principal1	8	-1	104443047	4627
ENSMUSG00000079235	protein_coding	Ccdc13	ENSMUST00000146716	retained_intron		9	-1	121831079	848
ENSMUSG00000062209	protein_coding	Erbb4	ENSMUST00000126682	retained_intron		1	-1	68330216	744
ENSMUSG00000056268	protein_coding	Dennd1b	ENSMUST00000200533	protein_coding		1	1	138963435	1853
ENSMUSG00000103307	TEC	Gm19335	ENSMUST00000195836	TEC		1	-1	68593686	2069
ENSMUSG00000111341	TEC	Gm47111	ENSMUST00000217162	TEC		9	-1	121846937	3116
ENSMUSG00000054435	protein_coding	Gimap4	ENSMUST00000118802	protein_coding		6	1	48684549	771
ENSMUSG00000043017	protein_coding	Ptgir	ENSMUST00000086101	protein_coding		7	1	16906490	2725
ENSMUSG00000102449	TEC	Gm37100	ENSMUST00000193344	TEC		1	-1	68116547	1353
ENSMUSG00000035770	protein_coding	Dync1li2	ENSMUST00000212343	retained_intron		8	-1	104423402	742
ENSMUSG00000083795	processed_pseudogene	Gm15670	ENSMUST00000117740	processed_pseudogene		1	-1	68293726	447
ENSMUSG00000035770	protein_coding	Dync1li2	ENSMUST00000212230	protein_coding		8	-1	104440554	1407
ENSMUSG00000087514	sense_intronic	Gm16076	ENSMUST00000140116	sense_intronic		1	-1	69106740	480
ENSMUSG00000103642	TEC	Gm37769	ENSMUST00000193753	TEC		1	-1	68713405	2369
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182786	protein_coding		10	1	90576570	3042
ENSMUSG00000035770	protein_coding	Dync1li2	ENSMUST00000212654	nonsense_mediated_decay		8	-1	104442908	1780
ENSMUSG00000056268	protein_coding	Dennd1b	ENSMUST00000198759	nonsense_mediated_decay		1	1	138963728	730
ENSMUSG00000090304	protein_coding	Vmn2r99	ENSMUST00000176107	protein_coding	principal1	17	1	19361949	9265
ENSMUSG00000054435	protein_coding	Gimap4	ENSMUST00000067506	protein_coding	alternative2	6	1	48684578	1359
ENSMUSG00000115259	processed_pseudogene	Gm49073	ENSMUST00000228340	processed_pseudogene		15	-1	4823667	311
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182600	protein_coding		10	1	90576612	1697
ENSMUSG00000090304	protein_coding	Vmn2r99	ENSMUST00000231989	protein_coding		17	1	19361949	9392
ENSMUSG00000043017	protein_coding	Ptgir	ENSMUST00000144408	protein_coding	principal1	7	1	16906514	3305
ENSMUSG00000054435	protein_coding	Gimap4	ENSMUST00000119575	protein_coding		6	1	48684578	900
ENSMUSG00000035770	protein_coding	Dync1li2	ENSMUST00000212040	retained_intron		8	-1	104443015	1650
ENSMUSG00000115415	processed_pseudogene	Gm49074	ENSMUST00000228517	processed_pseudogene		15	1	4847387	325
ENSMUSG00000029759	protein_coding	Pon3	ENSMUST00000031773	protein_coding	principal1	6	-1	5256286	1837
ENSMUSG00000035770	protein_coding	Dync1li2	ENSMUST00000211804	retained_intron		8	-1	104440556	599
ENSMUSG00000029513	protein_coding	Prkab1	ENSMUST00000111999	protein_coding	principal1	5	-1	116024508	2026
ENSMUSG00000035770	protein_coding	Dync1li2	ENSMUST00000212678	processed_transcript		8	-1	104441330	144
ENSMUSG00000115205	processed_pseudogene	Gm16374	ENSMUST00000228510	processed_pseudogene		15	1	4885120	999
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182284	protein_coding		10	1	90576691	2607
ENSMUSG00000035770	protein_coding	Dync1li2	ENSMUST00000212148	nonsense_mediated_decay		8	-1	104442744	368
ENSMUSG00000027339	protein_coding	Rassf2	ENSMUST00000028814	protein_coding	principal1	2	-1	132030001	8233
ENSMUSG00000024366	protein_coding	Gfra3	ENSMUST00000025224	protein_coding	principal1	18	-1	34720387	1997
ENSMUSG00000029513	protein_coding	Prkab1	ENSMUST00000143146	retained_intron		5	-1	116015161	808
ENSMUSG00000082691	processed_pseudogene	Dynlt1-ps1	ENSMUST00000117045	processed_pseudogene		6	-1	135349749	342
ENSMUSG00000111079	antisense	Gm47112	ENSMUST00000217491	antisense		9	1	121857680	1530
ENSMUSG00000110630	antisense	K230015D01Rik	ENSMUST00000211969	antisense		8	1	104442271	1516
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182430	protein_coding		10	1	90576718	3305
ENSMUSG00000027339	protein_coding	Rassf2	ENSMUST00000103182	protein_coding	principal1	2	-1	132030202	4589
ENSMUSG00000113537	lincRNA	Gm48807	ENSMUST00000221840	lincRNA		12	1	105864262	1064
ENSMUSG00000029759	protein_coding	Pon3	ENSMUST00000125686	protein_coding		6	-1	5256235	563
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182960	protein_coding		10	1	90576736	3397
ENSMUSG00000062638	protein_coding	Btnl1	ENSMUST00000080254	protein_coding	principal1	17	1	34377132	2113
ENSMUSG00000113835	lincRNA	Gm19554	ENSMUST00000220934	lincRNA		12	1	105899841	2076
ENSMUSG00000029759	protein_coding	Pon3	ENSMUST00000156848	retained_intron		6	-1	5256214	921
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182003	processed_transcript		10	1	90576749	493
ENSMUSG00000029513	protein_coding	Prkab1	ENSMUST00000143524	retained_intron		5	-1	116018211	744
ENSMUSG00000020097	protein_coding	Sgpl1	ENSMUST00000122259	protein_coding	principal1	10	-1	61147644	4102
ENSMUSG00000029759	protein_coding	Pon3	ENSMUST00000176948	retained_intron		6	-1	5254866	696
ENSMUSG00000081170	processed_pseudogene	Gm12922	ENSMUST00000120626	processed_pseudogene		4	-1	123710027	809
ENSMUSG00000109054	TEC	Gm44789	ENSMUST00000207195	TEC		8	-1	10019527	3101
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182045	protein_coding		10	1	90576750	544
ENSMUSG00000027339	protein_coding	Rassf2	ENSMUST00000155829	retained_intron		2	-1	132021173	4040
ENSMUSG00000029759	protein_coding	Pon3	ENSMUST00000176039	processed_transcript		6	-1	5255567	606
ENSMUSG00000027339	protein_coding	Rassf2	ENSMUST00000139047	protein_coding		2	-1	132030258	924
ENSMUSG00000029513	protein_coding	Prkab1	ENSMUST00000133098	nonsense_mediated_decay		5	-1	116024356	1019
ENSMUSG00000054435	protein_coding	Gimap4	ENSMUST00000121957	protein_coding		6	1	48684581	775
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182083	protein_coding		10	1	90576766	416
ENSMUSG00000020097	protein_coding	Sgpl1	ENSMUST00000092498	protein_coding	principal1	10	-1	61147674	4070
ENSMUSG00000094484	protein_coding	Gm21244	ENSMUST00000189201	protein_coding	principal1	Y	-1	7169293	3115
ENSMUSG00000027339	protein_coding	Rassf2	ENSMUST00000140791	protein_coding		2	-1	132029166	405
ENSMUSG00000094484	protein_coding	Gm21244	ENSMUST00000178447	protein_coding	principal1	Y	-1	7167777	684
ENSMUSG00000062638	protein_coding	Btnl1	ENSMUST00000236230	retained_intron		17	1	34377886	1796
ENSMUSG00000029513	protein_coding	Prkab1	ENSMUST00000148208	nonsense_mediated_decay		5	-1	116024451	794
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000183136	protein_coding		10	1	90576801	2786
ENSMUSG00000020097	protein_coding	Sgpl1	ENSMUST00000150258	nonsense_mediated_decay		10	-1	61147644	4361
ENSMUSG00000054435	protein_coding	Gimap4	ENSMUST00000156770	nonsense_mediated_decay		6	1	48684581	1076
ENSMUSG00000081475	processed_pseudogene	Gm14558	ENSMUST00000117458	processed_pseudogene		X	-1	21618510	381
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182595	protein_coding		10	1	90576815	3715
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182550	protein_coding		10	1	90576965	1868
ENSMUSG00000028648	protein_coding	Ndufs5	ENSMUST00000106207	protein_coding	principal1	4	-1	123716326	680
ENSMUSG00000110844	lincRNA	Gm47680	ENSMUST00000214084	lincRNA		9	1	32613452	771
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000099364	protein_coding		10	1	90576992	1383
ENSMUSG00000020097	protein_coding	Sgpl1	ENSMUST00000143225	retained_intron		10	-1	61103125	863
ENSMUSG00000094328	protein_coding	Tdpoz9	ENSMUST00000180746	protein_coding	principal1	3	-1	94054885	2325
ENSMUSG00000098796	processed_pseudogene	Gm27163	ENSMUST00000184767	processed_pseudogene		9	1	32629125	409
ENSMUSG00000031497	protein_coding	Tnfsf13b	ENSMUST00000208683	nonsense_mediated_decay		8	1	10006467	1919
ENSMUSG00000029513	protein_coding	Prkab1	ENSMUST00000147343	retained_intron		5	-1	116024397	842
ENSMUSG00000020097	protein_coding	Sgpl1	ENSMUST00000152316	retained_intron		10	-1	61105477	474
ENSMUSG00000079993	processed_pseudogene	Gm11799	ENSMUST00000116110	processed_pseudogene		4	-1	8167353	460
ENSMUSG00000094328	protein_coding	Tdpoz9	ENSMUST00000178458	protein_coding	principal1	3	-1	94050213	2233
ENSMUSG00000029513	protein_coding	Prkab1	ENSMUST00000141018	retained_intron		5	-1	116021646	670
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000165787	retained_intron		17	-1	35666263	3803
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182192	protein_coding		10	1	90829111	424
ENSMUSG00000112571	TEC	Gm48207	ENSMUST00000217855	TEC		10	-1	105534493	1510
ENSMUSG00000020097	protein_coding	Sgpl1	ENSMUST00000155919	protein_coding		10	-1	61147703	732
ENSMUSG00000029513	protein_coding	Prkab1	ENSMUST00000152174	retained_intron		5	-1	116024459	456
ENSMUSG00000028648	protein_coding	Ndufs5	ENSMUST00000106206	protein_coding	principal1	4	-1	123718186	599
ENSMUSG00000102655	unprocessed_pseudogene	Gm37081	ENSMUST00000192034	unprocessed_pseudogene		3	1	94069404	196
ENSMUSG00000054793	protein_coding	Cadm4	ENSMUST00000068023	protein_coding	principal1	7	1	24482023	2161
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000183051	processed_transcript		10	1	90829121	232
ENSMUSG00000112900	TEC	Gm48204	ENSMUST00000219546	TEC		10	-1	105516649	1969
ENSMUSG00000002289	protein_coding	Angptl4	ENSMUST00000002360	protein_coding	principal1	17	-1	33781830	3308
ENSMUSG00000085376	antisense	Gm14508	ENSMUST00000127049	antisense		5	1	116009316	901
ENSMUSG00000054435	protein_coding	Gimap4	ENSMUST00000090070	protein_coding	principal3	6	1	48684582	1804
ENSMUSG00000020097	protein_coding	Sgpl1	ENSMUST00000137833	protein_coding		10	-1	61147676	421
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000168922	nonsense_mediated_decay		17	-1	35663484	2507
ENSMUSG00000102479	processed_pseudogene	Gm18551	ENSMUST00000195594	processed_pseudogene		12	-1	114266248	642
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182202	protein_coding		10	1	90829428	587
ENSMUSG00000095251	protein_coding	Tdpoz7	ENSMUST00000091692	protein_coding	principal1	3	-1	94072644	1023
ENSMUSG00000054793	protein_coding	Cadm4	ENSMUST00000205820	processed_transcript		7	1	24499961	491
ENSMUSG00000028648	protein_coding	Ndufs5	ENSMUST00000030401	protein_coding	principal1	4	-1	123718202	525
ENSMUSG00000085282	processed_transcript	Gm15663	ENSMUST00000161364	antisense		10	1	105573953	402
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000164404	nonsense_mediated_decay		17	-1	35663026	1972
ENSMUSG00000085282	processed_transcript	Gm15663	ENSMUST00000145794	lincRNA		10	1	105574559	3200
ENSMUSG00000102497	IG_V_pseudogene	Ighv13-1	ENSMUST00000103480	IG_V_pseudogene		12	-1	114267906	294
ENSMUSG00000102696	unprocessed_pseudogene	Gm37778	ENSMUST00000191732	unprocessed_pseudogene		3	1	94079913	190
ENSMUSG00000020097	protein_coding	Sgpl1	ENSMUST00000142192	processed_transcript		10	-1	61147652	492
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000164295	retained_intron		17	-1	35658416	722
ENSMUSG00000028648	protein_coding	Ndufs5	ENSMUST00000137312	protein_coding		4	-1	123718181	350
ENSMUSG00000089904	unprocessed_pseudogene	Gm15664	ENSMUST00000160167	unprocessed_pseudogene		10	1	105520460	184
ENSMUSG00000002289	protein_coding	Angptl4	ENSMUST00000173869	nonsense_mediated_decay		17	-1	33781543	1859
ENSMUSG00000020097	protein_coding	Sgpl1	ENSMUST00000126307	protein_coding		10	-1	61146898	789
ENSMUSG00000053173	processed_pseudogene	Rpl18-ps2	ENSMUST00000118863	processed_pseudogene		6	1	128313357	567
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000170701	retained_intron		17	-1	35657517	603
ENSMUSG00000112512	TEC	Gm48203	ENSMUST00000219124	TEC		10	-1	105394286	1785
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000174129	retained_intron		17	-1	35660050	319
ENSMUSG00000020097	protein_coding	Sgpl1	ENSMUST00000124896	retained_intron		10	-1	61147604	519
ENSMUSG00000002289	protein_coding	Angptl4	ENSMUST00000174858	retained_intron		17	-1	33778465	539
ENSMUSG00000112243	TEC	Gm47342	ENSMUST00000220254	TEC		10	1	119523838	621
ENSMUSG00000084399	transcribed_processed_pseudogene	Gm15666	ENSMUST00000219490	processed_transcript		10	-1	105508599	2796
ENSMUSG00000031497	protein_coding	Tnfsf13b	ENSMUST00000207792	protein_coding	principal3	8	1	10006633	4771
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000169093	nonsense_mediated_decay		17	-1	35661969	832
ENSMUSG00000002289	protein_coding	Angptl4	ENSMUST00000174872	processed_transcript		17	-1	33779143	575
ENSMUSG00000105353	lincRNA	Gm42428	ENSMUST00000198677	lincRNA		5	1	44136620	302
ENSMUSG00000076672	IG_V_gene	Ighv3-6	ENSMUST00000195124	IG_V_gene	principal5	12	-1	114288582	350
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000168885	retained_intron		17	-1	35661648	708
ENSMUSG00000105263	TEC	Gm42427	ENSMUST00000200473	TEC		5	1	44137980	5292
ENSMUSG00000084399	transcribed_processed_pseudogene	Gm15666	ENSMUST00000118054	transcribed_processed_pseudogene		10	-1	105507100	976
ENSMUSG00000076672	IG_V_gene	Ighv3-6	ENSMUST00000103481	IG_V_gene	alternative2	12	-1	114288582	342
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000227663	protein_coding	alternative2	2	1	23068167	4566
ENSMUSG00000031497	protein_coding	Tnfsf13b	ENSMUST00000208166	retained_intron		8	1	10006637	2230
ENSMUSG00000112193	TEC	Gm48206	ENSMUST00000219067	TEC		10	1	105340249	2066
ENSMUSG00000117734	TEC	Gm50117	ENSMUST00000236350	TEC		18	-1	65911119	349
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182966	protein_coding		10	1	90829434	1625
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000164978	retained_intron		17	-1	35666733	618
ENSMUSG00000031497	protein_coding	Tnfsf13b	ENSMUST00000207551	processed_transcript		8	1	10006646	1127
ENSMUSG00000037490	protein_coding	Slc2a12	ENSMUST00000042261	protein_coding	principal1	10	1	22645011	4167
ENSMUSG00000091792	protein_coding	Gm3573	ENSMUST00000168673	protein_coding	principal1	14	-1	42190791	898
ENSMUSG00000117846	processed_pseudogene	Gm50118	ENSMUST00000235500	processed_pseudogene		18	1	65921857	512
ENSMUSG00000036019	protein_coding	Tmtc2	ENSMUST00000130665	processed_transcript		10	-1	105234949	2779
ENSMUSG00000118162	processed_pseudogene	Gm50119	ENSMUST00000236891	processed_pseudogene		18	-1	65924596	541
ENSMUSG00000031497	protein_coding	Tnfsf13b	ENSMUST00000033892	protein_coding	alternative2	8	1	10006654	1239
ENSMUSG00000062794	protein_coding	Zfp599	ENSMUST00000086281	protein_coding	principal1	9	-1	22259895	3574
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000171536	retained_intron		17	-1	35667540	786
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000179694	protein_coding		10	1	90829566	2663
ENSMUSG00000090019	protein_coding	Gimap1	ENSMUST00000054368	protein_coding	principal1	6	1	48739054	1493
ENSMUSG00000069996	lincRNA	Gm7125	ENSMUST00000230796	lincRNA		15	1	68792320	645
ENSMUSG00000031497	protein_coding	Tnfsf13b	ENSMUST00000208770	retained_intron		8	1	10031318	861
ENSMUSG00000059994	protein_coding	Fcrl1	ENSMUST00000163661	protein_coding	alternative2	3	1	87376387	1649
ENSMUSG00000082666	processed_pseudogene	Gm13677	ENSMUST00000120739	processed_pseudogene		2	-1	82123111	595
ENSMUSG00000024914	protein_coding	Drap1	ENSMUST00000148219	protein_coding		19	-1	5424759	727
ENSMUSG00000053617	protein_coding	Sh3pxd2a	ENSMUST00000081619	protein_coding	principal3	19	-1	47464401	10454
ENSMUSG00000038838	protein_coding	Vars2	ENSMUST00000165144	nonsense_mediated_decay		17	-1	35667549	718
ENSMUSG00000037490	protein_coding	Slc2a12	ENSMUST00000159174	processed_transcript		10	1	22649008	398
ENSMUSG00000081346	processed_pseudogene	Gm12030	ENSMUST00000121917	processed_pseudogene		11	1	20142568	223
ENSMUSG00000038412	protein_coding	Higd1a	ENSMUST00000215007	protein_coding		9	-1	121857612	1980
ENSMUSG00000030208	protein_coding	Emp1	ENSMUST00000205156	protein_coding	principal1	6	1	135362545	2911
ENSMUSG00000069996	lincRNA	Gm7125	ENSMUST00000230367	lincRNA		15	1	68878315	859
ENSMUSG00000069996	lincRNA	Gm7125	ENSMUST00000093430	processed_pseudogene		15	1	68876790	273
ENSMUSG00000103239	unprocessed_pseudogene	Gm37155	ENSMUST00000192152	unprocessed_pseudogene		3	-1	94088883	406
ENSMUSG00000024914	protein_coding	Drap1	ENSMUST00000125468	retained_intron		19	-1	5424220	939
ENSMUSG00000079273	unprocessed_pseudogene	Gm17165	ENSMUST00000096155	unprocessed_pseudogene		14	1	42218285	493
ENSMUSG00000090019	protein_coding	Gimap1	ENSMUST00000140054	protein_coding		6	1	48739073	621
ENSMUSG00000085035	lincRNA	Gm12031	ENSMUST00000156150	lincRNA		11	-1	20146344	627
ENSMUSG00000053617	protein_coding	Sh3pxd2a	ENSMUST00000237796	protein_coding		19	-1	47314751	3562
ENSMUSG00000118528	protein_coding	AC166256.1	ENSMUST00000238910	protein_coding	principal1	10	-1	22731237	129
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000179337	protein_coding		10	1	90829781	2692
ENSMUSG00000091960	unprocessed_pseudogene	Gm17038	ENSMUST00000166586	unprocessed_pseudogene		14	-1	42245444	494
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000166960	protein_coding		7	1	30563301	747
ENSMUSG00000041261	protein_coding	Car8	ENSMUST00000066674	protein_coding	principal1	4	-1	8239041	3853
ENSMUSG00000111746	lincRNA	4933422A05Rik	ENSMUST00000213706	lincRNA		9	1	35281105	1356
ENSMUSG00000059994	protein_coding	Fcrl1	ENSMUST00000072480	protein_coding	principal3	3	1	87376389	1980
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000182632	processed_transcript		10	1	90829819	429
ENSMUSG00000090019	protein_coding	Gimap1	ENSMUST00000204168	protein_coding	principal1	6	1	48739076	1469
ENSMUSG00000066771	processed_pseudogene	Gm5614	ENSMUST00000091097	processed_pseudogene		9	-1	35281835	318
ENSMUSG00000024914	protein_coding	Drap1	ENSMUST00000025853	protein_coding	principal3	19	-1	5424979	992
ENSMUSG00000053617	protein_coding	Sh3pxd2a	ENSMUST00000111800	protein_coding	alternative2	19	-1	47464247	3437
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000183145	processed_transcript		10	1	90829843	406
ENSMUSG00000090019	protein_coding	Gimap1	ENSMUST00000205031	retained_intron		6	1	48739087	949
ENSMUSG00000101479	processed_pseudogene	Gm28997	ENSMUST00000188759	processed_pseudogene		Y	1	7196381	429
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000183024	protein_coding		10	1	90895178	564
ENSMUSG00000090019	protein_coding	Gimap1	ENSMUST00000142703	retained_intron		6	1	48739107	527
ENSMUSG00000024914	protein_coding	Drap1	ENSMUST00000113673	protein_coding		19	-1	5424543	744
ENSMUSG00000030208	protein_coding	Emp1	ENSMUST00000154270	nonsense_mediated_decay		6	1	135362931	2832
ENSMUSG00000053617	protein_coding	Sh3pxd2a	ENSMUST00000237828	processed_transcript		19	-1	47410359	799
ENSMUSG00000090019	protein_coding	Gimap1	ENSMUST00000203797	retained_intron		6	1	48742182	1614
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000099366	protein_coding		10	1	90895098	2549
ENSMUSG00000059994	protein_coding	Fcrl1	ENSMUST00000167200	protein_coding	alternative2	3	1	87376448	1793
ENSMUSG00000030208	protein_coding	Emp1	ENSMUST00000204299	retained_intron		6	1	135363008	580
ENSMUSG00000058589	protein_coding	Anks1b	ENSMUST00000099368	protein_coding		10	1	89873672	2799
ENSMUSG00000030208	protein_coding	Emp1	ENSMUST00000204894	retained_intron		6	1	135363068	2598
ENSMUSG00000111909	processed_pseudogene	Gm18670	ENSMUST00000218712	processed_pseudogene		10	-1	90750687	696
ENSMUSG00000070866	protein_coding	Zfp804a	ENSMUST00000047527	protein_coding	principal1	2	1	82053222	4620
ENSMUSG00000059994	protein_coding	Fcrl1	ENSMUST00000194786	protein_coding	alternative2	3	1	87376460	1540
ENSMUSG00000056268	protein_coding	Dennd1b	ENSMUST00000200429	nonsense_mediated_decay		1	1	138963869	10770
ENSMUSG00000030208	protein_coding	Emp1	ENSMUST00000111907	protein_coding	principal1	6	1	135367493	2763
ENSMUSG00000043931	protein_coding	Gimap7	ENSMUST00000052503	protein_coding	principal1	6	1	48718621	1269
ENSMUSG00000044700	protein_coding	Tmem201	ENSMUST00000105687	protein_coding	alternative2	4	-1	149738044	3697
ENSMUSG00000024914	protein_coding	Drap1	ENSMUST00000126908	retained_intron		19	-1	5424787	890
ENSMUSG00000112507	processed_pseudogene	Gm47589	ENSMUST00000219326	processed_pseudogene		10	-1	90751066	195
ENSMUSG00000030208	protein_coding	Emp1	ENSMUST00000032330	protein_coding	principal1	6	1	135362931	2721
ENSMUSG00000059994	protein_coding	Fcrl1	ENSMUST00000191666	protein_coding	alternative2	3	1	87376467	925
ENSMUSG00000112015	TEC	Gm47592	ENSMUST00000219938	TEC		10	1	90813083	1307
ENSMUSG00000070866	protein_coding	Zfp804a	ENSMUST00000127187	processed_transcript		2	1	82235173	1566
ENSMUSG00000044700	protein_coding	Tmem201	ENSMUST00000054459	protein_coding	alternative2	4	-1	149738044	4631
ENSMUSG00000043931	protein_coding	Gimap7	ENSMUST00000204785	protein_coding		6	1	48718657	423
ENSMUSG00000024914	protein_coding	Drap1	ENSMUST00000113674	protein_coding	alternative2	19	-1	5424921	939
ENSMUSG00000116997	processed_pseudogene	Gm20040	ENSMUST00000232024	processed_pseudogene		16	-1	30092882	401
ENSMUSG00000026043	protein_coding	Col3a1	ENSMUST00000129611	retained_intron		1	1	45311538	3159
ENSMUSG00000043931	protein_coding	Gimap7	ENSMUST00000204266	retained_intron		6	1	48718665	1006
ENSMUSG00000116887	processed_pseudogene	Gm6029	ENSMUST00000231327	processed_pseudogene		16	1	30139459	371
ENSMUSG00000059994	protein_coding	Fcrl1	ENSMUST00000193854	retained_intron		3	1	87385660	2183
ENSMUSG00000044700	protein_coding	Tmem201	ENSMUST00000139923	retained_intron		4	-1	149730687	4069
ENSMUSG00000024914	protein_coding	Drap1	ENSMUST00000136579	protein_coding		19	-1	5424514	734
ENSMUSG00000089690	unprocessed_pseudogene	Gm16569	ENSMUST00000160526	unprocessed_pseudogene		17	1	3053159	314
ENSMUSG00000094322	IG_V_gene	Ighv9-4	ENSMUST00000194159	IG_V_gene		12	-1	114300389	351
ENSMUSG00000024914	protein_coding	Drap1	ENSMUST00000127043	retained_intron		19	-1	5424081	608
ENSMUSG00000094322	IG_V_gene	Ighv9-4	ENSMUST00000103482	IG_V_gene	principal1	12	-1	114300254	294
ENSMUSG00000044700	protein_coding	Tmem201	ENSMUST00000103208	protein_coding	principal3	4	-1	149738044	3620
ENSMUSG00000044697	processed_pseudogene	Gm5479	ENSMUST00000160578	processed_pseudogene		17	1	3056687	435
ENSMUSG00000100455	sense_intronic	Gm29170	ENSMUST00000190224	sense_intronic		1	1	143777642	3666
ENSMUSG00000024914	protein_coding	Drap1	ENSMUST00000134697	retained_intron		19	-1	5424779	559
ENSMUSG00000116299	lincRNA	Gm29904	ENSMUST00000230678	lincRNA		15	1	61288441	1079
ENSMUSG00000102601	IG_V_pseudogene	Ighv3-7	ENSMUST00000193370	IG_V_pseudogene		12	-1	114314618	348
ENSMUSG00000116299	lincRNA	Gm29904	ENSMUST00000229323	lincRNA		15	1	61288630	730
ENSMUSG00000101888	lincRNA	1700025H01Rik	ENSMUST00000187479	lincRNA		16	1	30195071	547
ENSMUSG00000038412	protein_coding	Higd1a	ENSMUST00000060251	protein_coding	principal1	9	-1	121858362	2232
ENSMUSG00000103989	IG_V_pseudogene	Ighv5-21	ENSMUST00000191935	IG_V_pseudogene		12	-1	114320324	295
ENSMUSG00000098715	protein_coding	Gm28053	ENSMUST00000127537	protein_coding	principal1	6	1	48718607	350
ENSMUSG00000110141	TEC	Gm45684	ENSMUST00000210244	TEC		7	-1	105886866	1571
ENSMUSG00000044700	protein_coding	Tmem201	ENSMUST00000140889	retained_intron		4	-1	149737998	1403
ENSMUSG00000098715	protein_coding	Gm28053	ENSMUST00000204317	retained_intron		6	1	48718654	591
ENSMUSG00000044700	protein_coding	Tmem201	ENSMUST00000145405	processed_transcript		4	-1	149737770	436
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000166419	retained_intron		7	-1	29213984	4403
ENSMUSG00000071322	protein_coding	Tcp10a	ENSMUST00000095726	protein_coding	principal2	17	1	7324646	2442
ENSMUSG00000038412	protein_coding	Higd1a	ENSMUST00000215300	protein_coding	principal1	9	-1	121857562	605
ENSMUSG00000087061	lincRNA	A130030D18Rik	ENSMUST00000128608	lincRNA		2	-1	82392202	654
ENSMUSG00000096344	protein_coding	Gm6408	ENSMUST00000179032	protein_coding	principal1	5	1	146481965	1171
ENSMUSG00000098715	protein_coding	Gm28053	ENSMUST00000204408	protein_coding	principal1	6	1	48739057	351
ENSMUSG00000082103	transcribed_unprocessed_pseudogene	Gm15320	ENSMUST00000236201	processed_transcript		17	-1	34402018	1307
ENSMUSG00000071322	protein_coding	Tcp10a	ENSMUST00000128533	protein_coding	principal2	17	1	7324667	2589
ENSMUSG00000080979	processed_pseudogene	Gm13675	ENSMUST00000120616	processed_pseudogene		2	1	82507216	529
ENSMUSG00000082103	transcribed_unprocessed_pseudogene	Gm15320	ENSMUST00000118085	transcribed_unprocessed_pseudogene		17	-1	34398162	364
ENSMUSG00000044867	processed_transcript	Gimap1os	ENSMUST00000155906	antisense		6	-1	48740621	1722
ENSMUSG00000083522	processed_pseudogene	Gm15321	ENSMUST00000121290	processed_pseudogene		17	1	34392403	288
ENSMUSG00000044867	processed_transcript	Gimap1os	ENSMUST00000205172	retained_intron		6	-1	48741444	1944
ENSMUSG00000071359	protein_coding	Tbpl1	ENSMUST00000127698	protein_coding	principal1	10	-1	22731447	2873
ENSMUSG00000031089	protein_coding	Slc6a14	ENSMUST00000033414	protein_coding	principal1	X	1	21714896	3434
ENSMUSG00000076674	IG_V_gene	Ighv3-8	ENSMUST00000103483	IG_V_gene	principal1	12	-1	114322801	394
ENSMUSG00000086938	antisense	4930481A15Rik	ENSMUST00000174754	antisense		19	1	5406740	840
ENSMUSG00000116031	lincRNA	D030024E09Rik	ENSMUST00000229538	lincRNA		15	-1	61745184	4166
ENSMUSG00000083804	processed_pseudogene	Gm13676	ENSMUST00000122185	processed_pseudogene		2	-1	82544522	591
ENSMUSG00000071322	protein_coding	Tcp10a	ENSMUST00000129709	protein_coding	principal2	17	1	7324686	1778
ENSMUSG00000086938	antisense	4930481A15Rik	ENSMUST00000174412	antisense		19	1	5406815	857
ENSMUSG00000081122	processed_pseudogene	Gm13678	ENSMUST00000118926	processed_pseudogene		2	1	82623213	340
ENSMUSG00000116031	lincRNA	D030024E09Rik	ENSMUST00000230725	lincRNA		15	-1	61774451	2515
ENSMUSG00000086938	antisense	4930481A15Rik	ENSMUST00000153017	antisense		19	1	5406822	662
ENSMUSG00000080797	transcribed_processed_pseudogene	Gm15760	ENSMUST00000231978	processed_transcript		16	-1	20548456	3245
ENSMUSG00000071359	protein_coding	Tbpl1	ENSMUST00000095794	protein_coding	principal1	10	-1	22731938	1195
ENSMUSG00000036019	protein_coding	Tmtc2	ENSMUST00000061506	protein_coding	principal1	10	-1	105574435	5629
ENSMUSG00000116109	lincRNA	Gm49498	ENSMUST00000229194	lincRNA		15	-1	61544183	3314
ENSMUSG00000038412	protein_coding	Higd1a	ENSMUST00000213124	protein_coding	principal1	9	-1	121857535	713
ENSMUSG00000080797	transcribed_processed_pseudogene	Gm15760	ENSMUST00000119553	transcribed_processed_pseudogene		16	-1	20546200	283
ENSMUSG00000043505	protein_coding	Gimap5	ENSMUST00000055558	protein_coding	principal1	6	1	48746197	1953
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000085819	retained_intron		7	-1	29213991	3578
ENSMUSG00000086938	antisense	4930481A15Rik	ENSMUST00000128542	antisense		19	1	5406874	2106
ENSMUSG00000086938	antisense	4930481A15Rik	ENSMUST00000174415	antisense		19	1	5406886	566
ENSMUSG00000071359	protein_coding	Tbpl1	ENSMUST00000141569	processed_transcript		10	-1	22706385	482
ENSMUSG00000104115	IG_V_pseudogene	Ighv8-1	ENSMUST00000194897	IG_V_pseudogene		12	-1	114333086	291
ENSMUSG00000051113	protein_coding	Fam71e1	ENSMUST00000107927	protein_coding	principal2	7	1	44496581	862
ENSMUSG00000036019	protein_coding	Tmtc2	ENSMUST00000147997	processed_transcript		10	-1	105234934	924
ENSMUSG00000038412	protein_coding	Higd1a	ENSMUST00000213147	protein_coding		9	-1	121857567	620
ENSMUSG00000051133	processed_pseudogene	Gm6293	ENSMUST00000050339	processed_pseudogene		19	-1	5415759	195
ENSMUSG00000071359	protein_coding	Tbpl1	ENSMUST00000138022	retained_intron		10	-1	22731361	557
ENSMUSG00000071322	protein_coding	Tcp10a	ENSMUST00000147803	protein_coding		17	1	7324689	371
ENSMUSG00000028749	protein_coding	Pla2g2f	ENSMUST00000030526	protein_coding	principal1	4	-1	138757626	2465
ENSMUSG00000036019	protein_coding	Tmtc2	ENSMUST00000133441	processed_transcript		10	-1	105199704	689
ENSMUSG00000043505	protein_coding	Gimap5	ENSMUST00000147047	processed_transcript		6	1	48746198	606
ENSMUSG00000051113	protein_coding	Fam71e1	ENSMUST00000205819	retained_intron		7	1	44496588	634
ENSMUSG00000038412	protein_coding	Higd1a	ENSMUST00000216914	protein_coding		9	-1	121857613	505
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000163330	protein_coding		7	1	30563307	583
ENSMUSG00000051113	protein_coding	Fam71e1	ENSMUST00000205422	protein_coding		7	1	44496599	366
ENSMUSG00000097621	lincRNA	Gm26562	ENSMUST00000181113	lincRNA		16	-1	30205879	2010
ENSMUSG00000038412	protein_coding	Higd1a	ENSMUST00000214988	protein_coding		9	-1	121856595	370
ENSMUSG00000043505	protein_coding	Gimap5	ENSMUST00000135174	processed_transcript		6	1	48746199	464
ENSMUSG00000071322	protein_coding	Tcp10a	ENSMUST00000140192	protein_coding		17	1	7324711	1504
ENSMUSG00000116938	processed_pseudogene	Gm49645	ENSMUST00000231234	processed_pseudogene		16	1	30255152	391
ENSMUSG00000043505	protein_coding	Gimap5	ENSMUST00000203006	retained_intron		6	1	48746299	2328
ENSMUSG00000051113	protein_coding	Fam71e1	ENSMUST00000205359	protein_coding	alternative2	7	1	44496658	1307
ENSMUSG00000036019	protein_coding	Tmtc2	ENSMUST00000143691	retained_intron		10	-1	105574451	4466
ENSMUSG00000111465	lincRNA	Gm47113	ENSMUST00000213591	lincRNA		9	1	121869496	9507
ENSMUSG00000036019	protein_coding	Tmtc2	ENSMUST00000139741	processed_transcript		10	-1	105535988	624
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000028121	protein_coding	alternative2	2	1	23068168	3630
ENSMUSG00000071322	protein_coding	Tcp10a	ENSMUST00000138222	protein_coding	alternative2	17	1	7324734	1838
ENSMUSG00000105349	antisense	Gm43604	ENSMUST00000199799	antisense		5	-1	136121670	705
ENSMUSG00000112176	TEC	Gm48205	ENSMUST00000218706	TEC		10	-1	105377476	137
ENSMUSG00000071322	protein_coding	Tcp10a	ENSMUST00000144861	protein_coding		17	1	7324869	1067
ENSMUSG00000116543	antisense	Gm36363	ENSMUST00000232254	antisense		16	-1	90850963	632
ENSMUSG00000116984	lincRNA	4930549P19Rik	ENSMUST00000231951	lincRNA		17	1	19415431	2172
ENSMUSG00000023176	protein_coding	Cpn2	ENSMUST00000064856	protein_coding	principal1	16	-1	30267499	4550
ENSMUSG00000116900	processed_pseudogene	Gm8387	ENSMUST00000232196	processed_pseudogene		16	-1	32326695	515
ENSMUSG00000093627	unprocessed_pseudogene	Vmn2r-ps121	ENSMUST00000176230	unprocessed_pseudogene		17	1	19453325	899
ENSMUSG00000083832	processed_pseudogene	Gm13771	ENSMUST00000117988	processed_pseudogene		2	-1	91641922	238
ENSMUSG00000086909	lincRNA	Gm4926	ENSMUST00000132691	lincRNA		11	-1	46645006	1610
ENSMUSG00000085788	bidirectional_promoter_lncRNA	4930470G03Rik	ENSMUST00000122926	bidirectional_promoter_lncRNA		13	1	21440471	2447
ENSMUSG00000112768	unprocessed_pseudogene	Gm48517	ENSMUST00000218809	unprocessed_pseudogene		12	-1	45573287	152
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000227809	protein_coding	alternative2	2	1	23068201	1986
ENSMUSG00000112604	TEC	Gm48518	ENSMUST00000217744	TEC		12	-1	45671793	2295
ENSMUSG00000087045	lincRNA	4930515B02Rik	ENSMUST00000140588	lincRNA		4	1	140872693	591
ENSMUSG00000039903	protein_coding	Eva1c	ENSMUST00000138064	processed_transcript		16	1	90826719	822
ENSMUSG00000023795	transcribed_unprocessed_pseudogene	Pisd-ps2	ENSMUST00000142526	transcribed_unprocessed_pseudogene		17	-1	3084082	1175
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000144088	protein_coding		2	1	23068235	488
ENSMUSG00000051113	protein_coding	Fam71e1	ENSMUST00000206398	nonsense_mediated_decay		7	1	44496668	799
ENSMUSG00000052085	protein_coding	Dock8	ENSMUST00000025831	protein_coding	principal1	19	1	24999534	7805
ENSMUSG00000023795	transcribed_unprocessed_pseudogene	Pisd-ps2	ENSMUST00000184936	processed_transcript		17	-1	3084040	712
ENSMUSG00000038374	protein_coding	Rbm8a	ENSMUST00000048915	protein_coding	alternative1	3	1	96629933	2608
ENSMUSG00000023795	transcribed_unprocessed_pseudogene	Pisd-ps2	ENSMUST00000127960	processed_transcript		17	-1	3084183	1424
ENSMUSG00000097914	antisense	Gm26838	ENSMUST00000180485	antisense		16	-1	35808946	911
ENSMUSG00000051113	protein_coding	Fam71e1	ENSMUST00000206033	retained_intron		7	1	44496672	593
ENSMUSG00000038482	protein_coding	Tfdp1	ENSMUST00000209885	protein_coding	principal3	8	1	13338751	2511
ENSMUSG00000051113	protein_coding	Fam71e1	ENSMUST00000206195	retained_intron		7	1	44496672	896
ENSMUSG00000052085	protein_coding	Dock8	ENSMUST00000235722	retained_intron		19	1	24999544	2158
ENSMUSG00000053774	protein_coding	Ubxn7	ENSMUST00000232016	retained_intron		16	1	32332257	369
ENSMUSG00000039771	protein_coding	Polr2j	ENSMUST00000111127	protein_coding		5	1	136116631	900
ENSMUSG00000051113	protein_coding	Fam71e1	ENSMUST00000206965	retained_intron		7	1	44496694	601
ENSMUSG00000020583	protein_coding	Matn3	ENSMUST00000020899	protein_coding	principal1	12	1	8947929	3014
ENSMUSG00000055313	protein_coding	Pgbd1	ENSMUST00000239222	processed_transcript		13	-1	21440901	2965
ENSMUSG00000051113	protein_coding	Fam71e1	ENSMUST00000205397	processed_transcript		7	1	44500425	237
ENSMUSG00000052085	protein_coding	Dock8	ENSMUST00000237705	processed_transcript		19	1	25052613	566
ENSMUSG00000052085	protein_coding	Dock8	ENSMUST00000236471	retained_intron		19	1	25077914	434
ENSMUSG00000052085	protein_coding	Dock8	ENSMUST00000237532	retained_intron		19	1	25149458	624
ENSMUSG00000055313	protein_coding	Pgbd1	ENSMUST00000239246	processed_transcript		13	-1	21441044	2642
ENSMUSG00000056268	protein_coding	Dennd1b	ENSMUST00000094505	protein_coding		1	1	138967720	8073
ENSMUSG00000044534	protein_coding	Ackr2	ENSMUST00000214340	protein_coding	principal1	9	1	121898355	3015
ENSMUSG00000055313	protein_coding	Pgbd1	ENSMUST00000148071	processed_transcript		13	-1	21441058	2600
ENSMUSG00000052085	protein_coding	Dock8	ENSMUST00000236576	retained_intron		19	1	25155812	436
ENSMUSG00000055313	protein_coding	Pgbd1	ENSMUST00000239296	transcribed_unitary_pseudogene		13	-1	21434597	1927
ENSMUSG00000099276	processed_pseudogene	Gm27228	ENSMUST00000184500	processed_pseudogene		7	-1	106039204	1038
ENSMUSG00000093378	antisense	Gm20663	ENSMUST00000176647	antisense		7	1	105901568	474
ENSMUSG00000038374	protein_coding	Rbm8a	ENSMUST00000196456	protein_coding	principal3	3	1	96629940	2604
ENSMUSG00000055313	protein_coding	Pgbd1	ENSMUST00000145494	processed_transcript		13	-1	21440710	1367
ENSMUSG00000098426	unprocessed_pseudogene	Gm27149	ENSMUST00000184716	unprocessed_pseudogene		7	-1	106092475	1266
ENSMUSG00000038482	protein_coding	Tfdp1	ENSMUST00000209396	protein_coding	alternative2	8	1	13338768	2421
ENSMUSG00000056268	protein_coding	Dennd1b	ENSMUST00000196816	retained_intron		1	1	139054321	2796
ENSMUSG00000061952	protein_coding	Olfr1377	ENSMUST00000216101	protein_coding	principal1	11	1	50981967	1990
ENSMUSG00000099241	processed_pseudogene	Gm18852	ENSMUST00000184149	processed_pseudogene		7	-1	105928592	3593
ENSMUSG00000061952	protein_coding	Olfr1377	ENSMUST00000213291	protein_coding	principal1	11	1	50982074	2441
ENSMUSG00000095649	unprocessed_pseudogene	Gm8979	ENSMUST00000183386	unprocessed_pseudogene		7	-1	106084046	7296
ENSMUSG00000039903	protein_coding	Eva1c	ENSMUST00000232665	processed_transcript		16	1	90826719	1948
ENSMUSG00000038374	protein_coding	Rbm8a	ENSMUST00000198027	protein_coding		3	1	96629940	2757
ENSMUSG00000044534	protein_coding	Ackr2	ENSMUST00000050327	protein_coding	principal1	9	1	121898395	2853
ENSMUSG00000039903	protein_coding	Eva1c	ENSMUST00000232274	processed_transcript		16	1	90826719	1788
ENSMUSG00000038374	protein_coding	Rbm8a	ENSMUST00000199628	retained_intron		3	1	96629973	464
ENSMUSG00000056268	protein_coding	Dennd1b	ENSMUST00000198418	retained_intron		1	1	139085924	4406
ENSMUSG00000041936	protein_coding	Agrn	ENSMUST00000105574	protein_coding		4	-1	156185901	7193
ENSMUSG00000044534	protein_coding	Ackr2	ENSMUST00000215664	protein_coding		9	1	121906164	345
ENSMUSG00000061952	protein_coding	Olfr1377	ENSMUST00000075177	protein_coding	principal1	11	1	50984658	1063
ENSMUSG00000039771	protein_coding	Polr2j	ENSMUST00000041366	protein_coding	principal1	5	1	136116631	646
ENSMUSG00000038374	protein_coding	Rbm8a	ENSMUST00000200647	protein_coding		3	1	96630197	2620
ENSMUSG00000041936	protein_coding	Agrn	ENSMUST00000071248	protein_coding		4	-1	156185901	4831
ENSMUSG00000044534	protein_coding	Ackr2	ENSMUST00000216326	protein_coding		9	1	121906264	531
ENSMUSG00000038374	protein_coding	Rbm8a	ENSMUST00000199022	retained_intron		3	1	96631221	560
ENSMUSG00000111059	lincRNA	Gm33838	ENSMUST00000214038	lincRNA		9	-1	35307599	786
ENSMUSG00000022849	protein_coding	Hspbap1	ENSMUST00000231579	protein_coding	principal1	16	1	35770375	1703
ENSMUSG00000034748	protein_coding	Sirt6	ENSMUST00000119324	protein_coding	alternative2	10	-1	81627320	1667
ENSMUSG00000039771	protein_coding	Polr2j	ENSMUST00000111129	protein_coding		5	1	136116702	474
ENSMUSG00000078606	protein_coding	Gm4070	ENSMUST00000106766	protein_coding	principal1	7	-1	105953940	8795
ENSMUSG00000103259	TEC	2610105M22Rik	ENSMUST00000193707	TEC		9	-1	35363113	1153
ENSMUSG00000038482	protein_coding	Tfdp1	ENSMUST00000210501	nonsense_mediated_decay		8	1	13338791	2682
ENSMUSG00000041936	protein_coding	Agrn	ENSMUST00000105575	protein_coding		4	-1	156185901	7262
ENSMUSG00000056268	protein_coding	Dennd1b	ENSMUST00000200295	processed_transcript		1	1	139121755	5337
ENSMUSG00000050445	protein_coding	Cyp8b1	ENSMUST00000062474	protein_coding	principal1	9	-1	121916305	1950
ENSMUSG00000078606	protein_coding	Gm4070	ENSMUST00000176467	protein_coding	principal1	7	-1	105953958	9007
ENSMUSG00000055408	lincRNA	Hottip	ENSMUST00000152875	lincRNA		6	1	52262775	2325
ENSMUSG00000038482	protein_coding	Tfdp1	ENSMUST00000211606	retained_intron		8	1	13338821	2787
ENSMUSG00000001521	protein_coding	Tulp3	ENSMUST00000001562	protein_coding	principal1	6	-1	128355851	3374
ENSMUSG00000056268	protein_coding	Dennd1b	ENSMUST00000199634	processed_transcript		1	1	139121755	7297
ENSMUSG00000022849	protein_coding	Hspbap1	ENSMUST00000231802	retained_intron		16	1	35770407	5212
ENSMUSG00000038482	protein_coding	Tfdp1	ENSMUST00000209282	protein_coding		8	1	13339326	552
ENSMUSG00000055408	lincRNA	Hottip	ENSMUST00000141300	lincRNA		6	1	52262784	2346
ENSMUSG00000056268	protein_coding	Dennd1b	ENSMUST00000168527	protein_coding	principal1	1	1	138963709	8206
ENSMUSG00000111141	unprocessed_pseudogene	Gm47115	ENSMUST00000216970	unprocessed_pseudogene		9	1	121934080	1323
ENSMUSG00000038482	protein_coding	Tfdp1	ENSMUST00000210165	protein_coding		8	1	13339661	452
ENSMUSG00000078606	protein_coding	Gm4070	ENSMUST00000176994	protein_coding		7	-1	105953967	496
ENSMUSG00000102451	TEC	Gm37655	ENSMUST00000193968	TEC		1	-1	139086984	4123
ENSMUSG00000001521	protein_coding	Tulp3	ENSMUST00000128708	processed_transcript		6	-1	128325547	600
ENSMUSG00000038482	protein_coding	Tfdp1	ENSMUST00000210518	retained_intron		8	1	13365170	832
ENSMUSG00000022849	protein_coding	Hspbap1	ENSMUST00000023555	nonsense_mediated_decay		16	1	35770407	4680
ENSMUSG00000102243	TEC	Gm37718	ENSMUST00000191655	TEC		1	1	139155152	2631
ENSMUSG00000078606	protein_coding	Gm4070	ENSMUST00000176969	processed_transcript		7	-1	105953953	358
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000163848	nonsense_mediated_decay		7	1	30563319	439
ENSMUSG00000104436	processed_transcript	Gm37423	ENSMUST00000194246	retained_intron		1	1	138968510	3342
ENSMUSG00000038482	protein_coding	Tfdp1	ENSMUST00000209945	protein_coding		8	1	13369465	551
ENSMUSG00000034748	protein_coding	Sirt6	ENSMUST00000042923	protein_coding	principal3	10	-1	81627797	1891
ENSMUSG00000095827	processed_pseudogene	Gm5283	ENSMUST00000177874	processed_pseudogene		3	-1	17230975	334
ENSMUSG00000024424	protein_coding	Ttc39c	ENSMUST00000234974	nonsense_mediated_decay		18	1	12599896	1070
ENSMUSG00000034748	protein_coding	Sirt6	ENSMUST00000126477	retained_intron		10	-1	81627566	595
ENSMUSG00000034748	protein_coding	Sirt6	ENSMUST00000143424	protein_coding		10	-1	81627257	888
ENSMUSG00000026662	protein_coding	Sephs1	ENSMUST00000027973	protein_coding	principal1	2	1	4881564	5319
ENSMUSG00000038482	protein_coding	Tfdp1	ENSMUST00000170909	protein_coding	principal3	8	1	13339674	1700
ENSMUSG00000053390	protein_coding	Zfp952	ENSMUST00000129057	processed_transcript		17	1	32993129	1221
ENSMUSG00000001521	protein_coding	Tulp3	ENSMUST00000138313	retained_intron		6	-1	128355841	2630
ENSMUSG00000055313	protein_coding	Pgbd1	ENSMUST00000151743	protein_coding	principal4	13	-1	21441053	3225
ENSMUSG00000001521	protein_coding	Tulp3	ENSMUST00000133134	protein_coding		6	-1	128355815	335
ENSMUSG00000084332	processed_pseudogene	Gm8840	ENSMUST00000122454	processed_pseudogene		1	-1	69131299	386
ENSMUSG00000055313	protein_coding	Pgbd1	ENSMUST00000122872	protein_coding	alternative2	13	-1	21441053	3114
ENSMUSG00000001521	protein_coding	Tulp3	ENSMUST00000203625	retained_intron		6	-1	128344975	3623
ENSMUSG00000101387	processed_pseudogene	Pced1c-ps	ENSMUST00000187740	processed_pseudogene		1	1	69377321	751
ENSMUSG00000028452	protein_coding	Vcp	ENSMUST00000030164	protein_coding	principal1	4	-1	43000507	3316
ENSMUSG00000055313	protein_coding	Pgbd1	ENSMUST00000099719	protein_coding	principal4	13	-1	21440710	3283
ENSMUSG00000001521	protein_coding	Tulp3	ENSMUST00000157005	protein_coding		6	-1	128355825	1053
ENSMUSG00000026662	protein_coding	Sephs1	ENSMUST00000115019	protein_coding	principal1	2	1	4882245	2933
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000226571	protein_coding	alternative2	2	1	23068944	3802
ENSMUSG00000108267	sense_intronic	Gm44190	ENSMUST00000205083	sense_intronic		6	-1	128350154	1401
ENSMUSG00000052316	protein_coding	Lrrc15	ENSMUST00000064606	protein_coding	principal1	16	-1	30283256	5310
ENSMUSG00000107396	lincRNA	4930425L21Rik	ENSMUST00000205073	lincRNA		6	1	135658913	871
ENSMUSG00000028452	protein_coding	Vcp	ENSMUST00000154541	processed_transcript		4	-1	42985821	894
ENSMUSG00000103340	IG_V_pseudogene	Ighv1-1	ENSMUST00000194912	IG_V_pseudogene		12	-1	114351995	291
ENSMUSG00000107396	lincRNA	4930425L21Rik	ENSMUST00000203439	lincRNA		6	1	135679637	899
ENSMUSG00000026662	protein_coding	Sephs1	ENSMUST00000144565	processed_transcript		2	1	4884057	583
ENSMUSG00000028452	protein_coding	Vcp	ENSMUST00000154423	processed_transcript		4	-1	42989330	707
ENSMUSG00000091859	protein_coding	Vmn2r100	ENSMUST00000166081	protein_coding	principal2	17	1	19504732	5803
ENSMUSG00000116817	processed_pseudogene	Gm5679	ENSMUST00000231620	processed_pseudogene		17	1	3097018	1148
ENSMUSG00000099804	lincRNA	Gm28497	ENSMUST00000189646	lincRNA		1	1	69441056	3029
ENSMUSG00000028452	protein_coding	Vcp	ENSMUST00000139843	processed_transcript		4	-1	42993758	618
ENSMUSG00000021361	protein_coding	Tmem14c	ENSMUST00000021790	protein_coding	principal1	13	1	41016292	914
ENSMUSG00000041936	protein_coding	Agrn	ENSMUST00000181062	retained_intron		4	-1	156186107	8612
ENSMUSG00000053390	protein_coding	Zfp952	ENSMUST00000141815	protein_coding		17	1	32993139	3118
ENSMUSG00000033488	protein_coding	Cryzl2	ENSMUST00000193791	protein_coding		1	1	157458577	778
ENSMUSG00000026662	protein_coding	Sephs1	ENSMUST00000140045	processed_transcript		2	1	4884384	738
ENSMUSG00000100354	lincRNA	Gm29113	ENSMUST00000185991	lincRNA		1	-1	69493788	3432
ENSMUSG00000091859	protein_coding	Vmn2r100	ENSMUST00000231465	protein_coding	alternative2	17	1	19504800	5546
ENSMUSG00000076671	IG_V_gene	Ighv13-2	ENSMUST00000125484	IG_V_gene		12	-1	114358218	359
ENSMUSG00000028452	protein_coding	Vcp	ENSMUST00000148182	processed_transcript		4	-1	43000433	539
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000228778	retained_intron		2	1	23069067	1410
ENSMUSG00000083825	unprocessed_pseudogene	Olfr1376-ps1	ENSMUST00000121306	unprocessed_pseudogene		11	1	50991791	955
ENSMUSG00000076671	IG_V_gene	Ighv13-2	ENSMUST00000183954	IG_V_gene	principal1	12	-1	114358060	302
ENSMUSG00000028451	protein_coding	1700022I11Rik	ENSMUST00000189414	processed_transcript		4	1	42969604	518
ENSMUSG00000028451	protein_coding	1700022I11Rik	ENSMUST00000185904	protein_coding		4	1	42969631	535
ENSMUSG00000053390	protein_coding	Zfp952	ENSMUST00000087666	protein_coding	principal1	17	1	32993197	2950
ENSMUSG00000107463	TEC	Gm44294	ENSMUST00000205090	TEC		6	1	52297124	728
ENSMUSG00000022228	protein_coding	Zscan26	ENSMUST00000032820	protein_coding		13	-1	21453660	3918
ENSMUSG00000028451	protein_coding	1700022I11Rik	ENSMUST00000190902	protein_coding		4	1	42969934	793
ENSMUSG00000018347	protein_coding	Zkscan6	ENSMUST00000018491	protein_coding	principal1	11	1	65807244	2302
ENSMUSG00000027130	protein_coding	Slc12a6	ENSMUST00000110991	protein_coding		2	1	112265825	4556
ENSMUSG00000041936	protein_coding	Agrn	ENSMUST00000180572	protein_coding	principal1	4	-1	156197488	6891
ENSMUSG00000100939	protein_coding	Gm28998	ENSMUST00000186194	protein_coding	principal1	Y	1	7253787	919
ENSMUSG00000076676	IG_V_gene	Ighv12-3	ENSMUST00000103485	IG_V_gene	principal1	12	-1	114366954	353
ENSMUSG00000053774	protein_coding	Ubxn7	ENSMUST00000115151	protein_coding	principal1	16	1	32332257	10313
ENSMUSG00000022228	protein_coding	Zscan26	ENSMUST00000110485	protein_coding	principal1	13	-1	21453730	4366
ENSMUSG00000060918	protein_coding	Olfr51	ENSMUST00000213415	protein_coding	principal1	11	1	51003596	2819
ENSMUSG00000027130	protein_coding	Slc12a6	ENSMUST00000110987	protein_coding		2	1	112266742	3722
ENSMUSG00000053390	protein_coding	Zfp952	ENSMUST00000157017	protein_coding		17	1	32993201	724
ENSMUSG00000018347	protein_coding	Zkscan6	ENSMUST00000071465	protein_coding	principal1	11	1	65807175	2270
ENSMUSG00000076677	IG_V_gene	Ighv6-3	ENSMUST00000103486	IG_V_gene	principal1	12	-1	114392169	356
ENSMUSG00000060918	protein_coding	Olfr51	ENSMUST00000076514	protein_coding	principal1	11	1	51006974	924
ENSMUSG00000053774	protein_coding	Ubxn7	ENSMUST00000232666	retained_intron		16	1	32332265	2537
ENSMUSG00000053774	protein_coding	Ubxn7	ENSMUST00000232137	protein_coding		16	1	32332268	4384
ENSMUSG00000019756	protein_coding	Prl8a1	ENSMUST00000006664	protein_coding	principal1	13	-1	27582171	864
ENSMUSG00000028451	protein_coding	1700022I11Rik	ENSMUST00000030163	protein_coding	principal1	4	1	42969946	3727
ENSMUSG00000041936	protein_coding	Agrn	ENSMUST00000144749	processed_transcript		4	-1	156173730	762
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000169143	protein_coding	principal1	7	-1	29213984	3670
ENSMUSG00000019756	protein_coding	Prl8a1	ENSMUST00000095926	protein_coding		13	-1	27582171	1682
ENSMUSG00000033488	protein_coding	Cryzl2	ENSMUST00000046743	protein_coding	principal1	1	1	157458580	1618
ENSMUSG00000105901	processed_pseudogene	Gm7291	ENSMUST00000199147	processed_pseudogene		5	-1	143157542	382
ENSMUSG00000069132	protein_coding	Nxph2	ENSMUST00000102945	protein_coding	principal1	2	1	23321246	2579
ENSMUSG00000099954	sense_intronic	Gm28112	ENSMUST00000190898	sense_intronic		1	-1	69662061	1875
ENSMUSG00000067430	protein_coding	Zfp763	ENSMUST00000087654	protein_coding	principal1	17	-1	33033402	3407
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000163782	nonsense_mediated_decay		7	-1	29210695	2495
ENSMUSG00000028451	protein_coding	1700022I11Rik	ENSMUST00000139127	nonsense_mediated_decay		4	1	42969946	1018
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000114529	protein_coding	alternative2	2	1	23069068	3630
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000172226	retained_intron		7	-1	29213982	2957
ENSMUSG00000033488	protein_coding	Cryzl2	ENSMUST00000119891	protein_coding		1	1	157458580	1125
ENSMUSG00000110377	TEC	Gm45363	ENSMUST00000210196	TEC		8	1	91055264	1294
ENSMUSG00000101156	antisense	Gm29114	ENSMUST00000187100	antisense		1	1	69513932	2508
ENSMUSG00000102704	TEC	Gm38309	ENSMUST00000192063	TEC		2	1	23492931	1518
ENSMUSG00000033488	protein_coding	Cryzl2	ENSMUST00000195702	protein_coding		1	1	157461952	427
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000114526	protein_coding	principal4	2	1	23069068	3725
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000164653	nonsense_mediated_decay		7	-1	29214035	2241
ENSMUSG00000067430	protein_coding	Zfp763	ENSMUST00000124465	processed_transcript		17	-1	33033168	540
ENSMUSG00000111664	TEC	Gm48865	ENSMUST00000214047	TEC		10	1	31321418	2605
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000171102	processed_transcript		7	-1	29190200	327
ENSMUSG00000108607	processed_transcript	Gm44646	ENSMUST00000205847	antisense		7	1	44501689	421
ENSMUSG00000033488	protein_coding	Cryzl2	ENSMUST00000194220	nonsense_mediated_decay		1	1	157472268	1202
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000163445	retained_intron		7	-1	29202305	1758
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000228050	protein_coding	alternative2	2	1	23069070	4804
ENSMUSG00000108607	processed_transcript	Gm44646	ENSMUST00000207290	TEC		7	1	44503754	513
ENSMUSG00000023350	transcribed_processed_pseudogene	Phf8-ps	ENSMUST00000234144	processed_transcript		17	-1	33068025	3883
ENSMUSG00000023350	transcribed_processed_pseudogene	Phf8-ps	ENSMUST00000234113	transcribed_processed_pseudogene		17	-1	33067826	2727
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000166654	retained_intron		7	-1	29214003	2699
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000228891	processed_transcript		2	1	23069072	570
ENSMUSG00000038233	protein_coding	Gask1a	ENSMUST00000043011	protein_coding	principal2	9	1	121950988	3623
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000114523	protein_coding	alternative2	2	1	23069327	3632
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000155602	protein_coding	alternative2	2	1	23069451	1712
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000069861	protein_coding		7	-1	29211495	2251
ENSMUSG00000048668	protein_coding	Rhno1	ENSMUST00000112152	protein_coding	principal1	6	-1	128362812	2015
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000228856	processed_transcript		2	1	23069451	2287
ENSMUSG00000063704	protein_coding	Mapk15	ENSMUST00000161961	processed_transcript		15	1	75993769	419
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000226938	retained_intron		2	1	23079727	1438
ENSMUSG00000038233	protein_coding	Gask1a	ENSMUST00000214536	protein_coding		9	1	121951020	2789
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000165907	retained_intron		7	-1	29211084	1296
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000163614	retained_intron		7	-1	29210509	869
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000227816	processed_transcript		2	1	23080645	615
ENSMUSG00000038233	protein_coding	Gask1a	ENSMUST00000215990	protein_coding	alternative2	9	1	121951035	2149
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000226252	retained_intron		2	1	23094201	1072
ENSMUSG00000048668	protein_coding	Rhno1	ENSMUST00000057421	protein_coding	principal1	6	-1	128362868	1584
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000167064	processed_transcript		7	-1	29214020	1097
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000227489	retained_intron		2	1	23098069	3359
ENSMUSG00000026781	protein_coding	Acbd5	ENSMUST00000227612	retained_intron		2	1	23098990	1787
ENSMUSG00000038233	protein_coding	Gask1a	ENSMUST00000213773	protein_coding	principal2	9	1	121952734	2088
ENSMUSG00000048668	protein_coding	Rhno1	ENSMUST00000112151	protein_coding	principal1	6	-1	128362868	1108
ENSMUSG00000027130	protein_coding	Slc12a6	ENSMUST00000028549	protein_coding	principal4	2	1	112266819	6105
ENSMUSG00000075040	protein_coding	Zfp408	ENSMUST00000099714	protein_coding	alternative2	2	-1	91649779	3469
ENSMUSG00000049676	protein_coding	Catsperg1	ENSMUST00000047846	protein_coding		7	-1	29214033	3566
ENSMUSG00000111053	processed_transcript	Gm49343	ENSMUST00000214808	processed_transcript		9	1	121937973	753
ENSMUSG00000048668	protein_coding	Rhno1	ENSMUST00000155573	protein_coding		6	-1	128362579	3697
ENSMUSG00000061115	processed_pseudogene	Gm17113	ENSMUST00000170118	processed_pseudogene		7	1	29183036	171
ENSMUSG00000048668	protein_coding	Rhno1	ENSMUST00000203719	protein_coding		6	-1	128362695	472
ENSMUSG00000024424	protein_coding	Ttc39c	ENSMUST00000234255	protein_coding		18	1	12599896	1910
ENSMUSG00000048668	protein_coding	Rhno1	ENSMUST00000132604	processed_transcript		6	-1	128362911	367
ENSMUSG00000019370	protein_coding	Calm3	ENSMUST00000019514	protein_coding	principal1	7	-1	16924114	2290
ENSMUSG00000027130	protein_coding	Slc12a6	ENSMUST00000053666	protein_coding	alternative1	2	1	112284577	6060
ENSMUSG00000048668	protein_coding	Rhno1	ENSMUST00000223237	protein_coding	principal1	6	-1	128359357	1081
ENSMUSG00000075040	protein_coding	Zfp408	ENSMUST00000111333	protein_coding	principal3	2	-1	91649791	3740
ENSMUSG00000000295	protein_coding	Hddc2	ENSMUST00000000304	protein_coding	principal1	10	1	31313383	858
ENSMUSG00000117692	lincRNA	Gm50114	ENSMUST00000235357	lincRNA		19	-1	27262323	574
ENSMUSG00000103390	TEC	Gm38301	ENSMUST00000195573	TEC		1	1	127406776	543
ENSMUSG00000107753	TEC	Gm44371	ENSMUST00000204148	TEC		6	1	128359518	467
ENSMUSG00000019370	protein_coding	Calm3	ENSMUST00000172594	nonsense_mediated_decay		7	-1	16917165	648
ENSMUSG00000075040	protein_coding	Zfp408	ENSMUST00000155045	retained_intron		2	-1	91648235	667
ENSMUSG00000027130	protein_coding	Slc12a6	ENSMUST00000133840	processed_transcript		2	1	112346995	652
ENSMUSG00000000295	protein_coding	Hddc2	ENSMUST00000162076	retained_intron		10	1	31313405	941
ENSMUSG00000019370	protein_coding	Calm3	ENSMUST00000173139	protein_coding		7	-1	16917203	490
ENSMUSG00000027130	protein_coding	Slc12a6	ENSMUST00000132752	processed_transcript		2	1	112352526	600
ENSMUSG00000097253	antisense	Gm26770	ENSMUST00000180586	antisense		6	1	128356004	2237
ENSMUSG00000000295	protein_coding	Hddc2	ENSMUST00000160447	retained_intron		10	1	31313407	2781
ENSMUSG00000075040	protein_coding	Zfp408	ENSMUST00000145582	nonsense_mediated_decay		2	-1	91649759	663
ENSMUSG00000027130	protein_coding	Slc12a6	ENSMUST00000156470	processed_transcript		2	1	112354202	766
ENSMUSG00000024424	protein_coding	Ttc39c	ENSMUST00000169401	protein_coding	alternative1	18	1	12599926	1950
ENSMUSG00000019370	protein_coding	Calm3	ENSMUST00000173557	processed_transcript		7	-1	16923829	482
ENSMUSG00000000295	protein_coding	Hddc2	ENSMUST00000159194	nonsense_mediated_decay		10	1	31313472	819
ENSMUSG00000075040	protein_coding	Zfp408	ENSMUST00000127702	processed_transcript		2	-1	91649743	746
ENSMUSG00000094174	IG_V_gene	Ighv6-4	ENSMUST00000191918	IG_V_gene		12	-1	114406961	357
ENSMUSG00000047298	protein_coding	Kcnv2	ENSMUST00000056708	protein_coding	principal1	19	1	27322588	5108
ENSMUSG00000075040	protein_coding	Zfp408	ENSMUST00000152769	processed_transcript		2	-1	91649760	485
ENSMUSG00000094174	IG_V_gene	Ighv6-4	ENSMUST00000177949	protein_coding	principal1	12	-1	114406773	297
ENSMUSG00000000295	protein_coding	Hddc2	ENSMUST00000159659	retained_intron		10	1	31320167	631
ENSMUSG00000024424	protein_coding	Ttc39c	ENSMUST00000141060	retained_intron		18	1	12643344	3243
ENSMUSG00000027130	protein_coding	Slc12a6	ENSMUST00000137896	retained_intron		2	1	112356195	4464
ENSMUSG00000083973	processed_pseudogene	Gm13459	ENSMUST00000121558	processed_pseudogene		2	1	24674701	646
ENSMUSG00000115201	processed_pseudogene	Gm49276	ENSMUST00000227559	processed_pseudogene		15	-1	12757464	367
ENSMUSG00000115119	processed_pseudogene	Gm17756	ENSMUST00000227665	processed_pseudogene		15	-1	12765375	204
ENSMUSG00000115024	processed_pseudogene	Gm49277	ENSMUST00000228527	processed_pseudogene		15	-1	12805173	392
ENSMUSG00000070802	protein_coding	Pnmal2	ENSMUST00000094807	protein_coding	principal1	7	1	16944682	4147
ENSMUSG00000063704	protein_coding	Mapk15	ENSMUST00000089669	protein_coding	principal1	15	1	75993769	1931
ENSMUSG00000024424	protein_coding	Ttc39c	ENSMUST00000234966	protein_coding	principal2	18	1	12643344	4385
ENSMUSG00000029703	protein_coding	Lrwd1	ENSMUST00000006301	protein_coding	principal1	5	-1	136136074	2473
ENSMUSG00000064264	protein_coding	Zfp428	ENSMUST00000176880	protein_coding		7	1	24507006	1045
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000131327	retained_intron		19	-1	3903072	2350
ENSMUSG00000024424	protein_coding	Ttc39c	ENSMUST00000025294	protein_coding	alternative1	18	1	12643362	1990
ENSMUSG00000024424	protein_coding	Ttc39c	ENSMUST00000234848	retained_intron		18	1	12689728	783
ENSMUSG00000024424	protein_coding	Ttc39c	ENSMUST00000143388	retained_intron		18	1	12734705	483
ENSMUSG00000043773	lincRNA	1700048O20Rik	ENSMUST00000214777	lincRNA		9	1	121937223	1900
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000102849	protein_coding	principal1	2	1	30982279	5088
ENSMUSG00000063704	protein_coding	Mapk15	ENSMUST00000160092	retained_intron		15	1	75995939	1788
ENSMUSG00000117573	antisense	Gm41668	ENSMUST00000234607	antisense		18	-1	12648419	334
ENSMUSG00000059486	protein_coding	Kbtbd2	ENSMUST00000114323	protein_coding	principal1	6	-1	56797736	3816
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000192882	retained_intron		2	1	30982334	1901
ENSMUSG00000087698	antisense	Gm13031	ENSMUST00000140501	antisense		4	-1	140957902	924
ENSMUSG00000063704	protein_coding	Mapk15	ENSMUST00000160637	processed_transcript		15	1	75996713	1250
ENSMUSG00000117418	antisense	Gm50063	ENSMUST00000234209	antisense		18	-1	12644364	390
ENSMUSG00000043773	lincRNA	1700048O20Rik	ENSMUST00000215356	lincRNA		9	1	121938116	456
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000061544	protein_coding		2	1	30982363	1360
ENSMUSG00000063704	protein_coding	Mapk15	ENSMUST00000230929	protein_coding		15	1	75998371	626
ENSMUSG00000043773	lincRNA	1700048O20Rik	ENSMUST00000063103	lincRNA		9	1	121938135	1642
ENSMUSG00000059486	protein_coding	Kbtbd2	ENSMUST00000114321	protein_coding	principal1	6	-1	56797813	3868
ENSMUSG00000096764	protein_coding	Gm21985	ENSMUST00000141047	nonsense_mediated_decay	principal1	2	1	112266314	4532
ENSMUSG00000039903	protein_coding	Eva1c	ENSMUST00000099548	protein_coding		16	1	90826746	1611
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000138161	protein_coding		2	1	30982397	462
ENSMUSG00000101818	protein_coding	Gm28269	ENSMUST00000189511	protein_coding	principal1	X	-1	21745097	559
ENSMUSG00000059486	protein_coding	Kbtbd2	ENSMUST00000151308	protein_coding		6	-1	56797279	440
ENSMUSG00000059486	protein_coding	Kbtbd2	ENSMUST00000124994	processed_transcript		6	-1	56796747	251
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000142232	protein_coding		2	1	30982429	438
ENSMUSG00000039903	protein_coding	Eva1c	ENSMUST00000130868	nonsense_mediated_decay		16	1	90830808	2076
ENSMUSG00000108080	TEC	Gm10209	ENSMUST00000203397	TEC		6	1	56797591	1607
ENSMUSG00000064264	protein_coding	Zfp428	ENSMUST00000071361	protein_coding	principal3	7	1	24507070	1182
ENSMUSG00000101776	lincRNA	Gm28268	ENSMUST00000188966	lincRNA		X	1	21751379	2528
ENSMUSG00000117705	processed_pseudogene	Gm50113	ENSMUST00000235697	processed_pseudogene		19	1	27366072	496
ENSMUSG00000082175	processed_pseudogene	Gm14563	ENSMUST00000120571	processed_pseudogene		X	-1	22205523	354
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000125601	protein_coding		2	1	30995655	467
ENSMUSG00000117752	processed_transcript	Gm35554	ENSMUST00000237751	lincRNA		19	1	27344749	584
ENSMUSG00000039903	protein_coding	Eva1c	ENSMUST00000037539	protein_coding	principal1	16	1	90830859	2142
ENSMUSG00000064264	protein_coding	Zfp428	ENSMUST00000177228	protein_coding		7	1	24507099	435
ENSMUSG00000083030	processed_pseudogene	Gm14561	ENSMUST00000117376	processed_pseudogene		X	-1	22228343	798
ENSMUSG00000117752	processed_transcript	Gm35554	ENSMUST00000237132	retained_intron		19	1	27344751	4888
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000128295	protein_coding		2	1	30995756	639
ENSMUSG00000039903	protein_coding	Eva1c	ENSMUST00000152223	nonsense_mediated_decay		16	1	90830867	1937
ENSMUSG00000110729	lincRNA	Gm47117	ENSMUST00000215635	lincRNA		9	-1	122012140	2232
ENSMUSG00000117752	processed_transcript	Gm35554	ENSMUST00000235573	lincRNA		19	1	27344751	760
ENSMUSG00000118511	processed_pseudogene	AL732295.1	ENSMUST00000239065	processed_pseudogene		X	-1	22249106	302
ENSMUSG00000039903	protein_coding	Eva1c	ENSMUST00000231280	protein_coding		16	1	90830988	1692
ENSMUSG00000081064	processed_pseudogene	Gm6071	ENSMUST00000119561	processed_pseudogene		X	-1	22306274	440
ENSMUSG00000117752	processed_transcript	Gm35554	ENSMUST00000237044	lincRNA		19	1	27344769	1724
ENSMUSG00000064264	protein_coding	Zfp428	ENSMUST00000177205	protein_coding	alternative2	7	1	24507130	1159
ENSMUSG00000111873	antisense	Gm39463	ENSMUST00000214575	antisense		9	1	121996118	735
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000154351	processed_transcript		2	1	30996048	526
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000136588	protein_coding		2	1	30998840	430
ENSMUSG00000029703	protein_coding	Lrwd1	ENSMUST00000132976	retained_intron		5	-1	136136001	3139
ENSMUSG00000117477	protein_coding	Gm50092	ENSMUST00000234781	protein_coding	principal1	7	-1	24512455	1973
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000154634	retained_intron		2	1	31002561	869
ENSMUSG00000029703	protein_coding	Lrwd1	ENSMUST00000142272	retained_intron		5	-1	136125559	2200
ENSMUSG00000085073	processed_pseudogene	Gm14562	ENSMUST00000129885	processed_pseudogene		X	-1	22439418	543
ENSMUSG00000078915	processed_pseudogene	Hsp25-ps1	ENSMUST00000109187	processed_pseudogene		13	-1	45079127	630
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000127776	retained_intron		2	1	31019819	622
ENSMUSG00000029703	protein_coding	Lrwd1	ENSMUST00000128255	protein_coding		5	-1	136130250	219
ENSMUSG00000083290	processed_pseudogene	Gm15030	ENSMUST00000119804	processed_pseudogene		X	1	22446056	484
ENSMUSG00000025997	protein_coding	Ikzf2	ENSMUST00000027146	protein_coding	principal2	1	-1	69685821	9278
ENSMUSG00000047061	TEC	Gm9817	ENSMUST00000054395	TEC		13	1	45078692	2531
ENSMUSG00000071656	protein_coding	Lrrn4cl	ENSMUST00000235683	protein_coding	principal1	19	1	8850768	2420
ENSMUSG00000066235	protein_coding	Pomgnt2	ENSMUST00000217610	protein_coding	principal1	9	-1	121996013	2413
ENSMUSG00000034122	unprocessed_pseudogene	Nlrp4d	ENSMUST00000182420	unprocessed_pseudogene		7	-1	10388935	2946
ENSMUSG00000026854	protein_coding	Usp20	ENSMUST00000170476	protein_coding	principal1	2	1	30996042	4970
ENSMUSG00000039903	protein_coding	Eva1c	ENSMUST00000099543	protein_coding		16	1	90831113	1554
ENSMUSG00000106457	TEC	Gm42585	ENSMUST00000198731	TEC		5	1	25369020	4020
ENSMUSG00000025997	protein_coding	Ikzf2	ENSMUST00000190771	protein_coding	alternative1	1	-1	69685886	2483
ENSMUSG00000113553	lincRNA	Gm40932	ENSMUST00000221315	lincRNA		13	1	45099957	511
ENSMUSG00000052025	transcribed_processed_pseudogene	Ppp1r2-ps7	ENSMUST00000185057	processed_transcript		X	1	22461632	763
ENSMUSG00000092181	processed_pseudogene	Gm20432	ENSMUST00000173716	processed_pseudogene		5	-1	25433285	250
ENSMUSG00000026347	protein_coding	Tmem163	ENSMUST00000027585	nonsense_mediated_decay		1	-1	127678096	2744
ENSMUSG00000071656	protein_coding	Lrrn4cl	ENSMUST00000096257	protein_coding	principal1	19	1	8850785	2583
ENSMUSG00000039903	protein_coding	Eva1c	ENSMUST00000154180	protein_coding		16	1	90846398	974
ENSMUSG00000113553	lincRNA	Gm40932	ENSMUST00000221244	lincRNA		13	1	45106893	498
ENSMUSG00000052025	transcribed_processed_pseudogene	Ppp1r2-ps7	ENSMUST00000140102	transcribed_processed_pseudogene		X	1	22461729	609
ENSMUSG00000092510	processed_pseudogene	Gm18343	ENSMUST00000172802	processed_pseudogene		5	1	25450305	604
ENSMUSG00000098136	processed_pseudogene	Gm8513	ENSMUST00000182830	processed_pseudogene		13	-1	45187536	1003
ENSMUSG00000092344	processed_pseudogene	Hspe1-ps3	ENSMUST00000172726	processed_pseudogene		5	1	25391608	277
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000112250	protein_coding	principal4	14	-1	30491453	8985
ENSMUSG00000027131	protein_coding	Emc4	ENSMUST00000028551	protein_coding	principal1	2	-1	112368027	983
ENSMUSG00000101982	transcribed_processed_pseudogene	Gm28990	ENSMUST00000190416	processed_transcript		Y	-1	65238079	1136
ENSMUSG00000022248	protein_coding	Rad1	ENSMUST00000022856	protein_coding	principal1	15	1	10486018	1514
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000223573	retained_intron		14	-1	30045978	3503
ENSMUSG00000029703	protein_coding	Lrwd1	ENSMUST00000148475	retained_intron		5	-1	136136022	2339
ENSMUSG00000112309	TEC	Gm48353	ENSMUST00000220243	TEC		10	-1	62859994	1871
ENSMUSG00000066235	protein_coding	Pomgnt2	ENSMUST00000084743	protein_coding	principal1	9	-1	121996025	2365
ENSMUSG00000027131	protein_coding	Emc4	ENSMUST00000153967	processed_transcript		2	-1	112368020	700
ENSMUSG00000026347	protein_coding	Tmem163	ENSMUST00000185560	protein_coding	principal1	1	-1	127679548	3488
ENSMUSG00000025997	protein_coding	Ikzf2	ENSMUST00000187184	protein_coding		1	-1	69687245	2013
ENSMUSG00000022248	protein_coding	Rad1	ENSMUST00000170531	retained_intron		15	1	10486049	4206
ENSMUSG00000064125	protein_coding	Prr36	ENSMUST00000168386	protein_coding	principal1	8	-1	4217312	4616
ENSMUSG00000029703	protein_coding	Lrwd1	ENSMUST00000199786	retained_intron		5	-1	136136002	1545
ENSMUSG00000081541	processed_pseudogene	Gm13940	ENSMUST00000121023	processed_pseudogene		2	-1	112389497	301
ENSMUSG00000022248	protein_coding	Rad1	ENSMUST00000100775	protein_coding		15	1	10486069	4085
ENSMUSG00000096527	protein_coding	Gm6370	ENSMUST00000198912	protein_coding	alternative2	5	1	146491365	1017
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000114175	protein_coding	alternative2	17	1	34398820	1575
ENSMUSG00000064125	protein_coding	Prr36	ENSMUST00000177491	protein_coding		8	-1	4216912	679
ENSMUSG00000022248	protein_coding	Rad1	ENSMUST00000169519	protein_coding		15	1	10486080	838
ENSMUSG00000096527	protein_coding	Gm6370	ENSMUST00000110611	protein_coding	principal2	5	1	146491363	1142
ENSMUSG00000101982	transcribed_processed_pseudogene	Gm28990	ENSMUST00000189255	processed_transcript		Y	-1	65238079	1581
ENSMUSG00000029703	protein_coding	Lrwd1	ENSMUST00000139908	retained_intron		5	-1	136136062	2723
ENSMUSG00000064125	protein_coding	Prr36	ENSMUST00000175906	protein_coding		8	-1	4217152	759
ENSMUSG00000029703	protein_coding	Lrwd1	ENSMUST00000149673	retained_intron		5	-1	136133877	800
ENSMUSG00000066235	protein_coding	Pomgnt2	ENSMUST00000216669	protein_coding	principal1	9	-1	121996009	2504
ENSMUSG00000026347	protein_coding	Tmem163	ENSMUST00000160111	retained_intron		1	-1	127500344	603
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000149121	processed_transcript		17	1	34398821	540
ENSMUSG00000029703	protein_coding	Lrwd1	ENSMUST00000150406	protein_coding		5	-1	136135997	694
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000112249	protein_coding	alternative2	14	-1	30353526	8876
ENSMUSG00000064125	protein_coding	Prr36	ENSMUST00000176227	protein_coding		8	-1	4217459	650
ENSMUSG00000025997	protein_coding	Ikzf2	ENSMUST00000190855	protein_coding		1	-1	69684157	1359
ENSMUSG00000066235	protein_coding	Pomgnt2	ENSMUST00000214511	protein_coding		9	-1	121997110	681
ENSMUSG00000030450	protein_coding	Oca2	ENSMUST00000032633	protein_coding	principal1	7	1	56239760	3132
ENSMUSG00000025997	protein_coding	Ikzf2	ENSMUST00000188110	protein_coding		1	-1	69684157	1365
ENSMUSG00000022248	protein_coding	Rad1	ENSMUST00000168408	nonsense_mediated_decay		15	1	10486475	810
ENSMUSG00000101982	transcribed_processed_pseudogene	Gm28990	ENSMUST00000187865	processed_transcript		Y	-1	65236030	138
ENSMUSG00000025997	protein_coding	Ikzf2	ENSMUST00000191262	protein_coding		1	-1	69684157	1146
ENSMUSG00000066235	protein_coding	Pomgnt2	ENSMUST00000214533	protein_coding		9	-1	121996010	347
ENSMUSG00000115537	processed_pseudogene	Gm6704	ENSMUST00000226628	processed_pseudogene		15	-1	36629869	225
ENSMUSG00000026347	protein_coding	Tmem163	ENSMUST00000162406	processed_transcript		1	-1	127537430	514
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000139063	protein_coding		17	1	34398821	787
ENSMUSG00000101982	transcribed_processed_pseudogene	Gm28990	ENSMUST00000186544	processed_transcript		Y	-1	65236032	542
ENSMUSG00000101982	transcribed_processed_pseudogene	Gm28990	ENSMUST00000189490	processed_transcript		Y	-1	65236032	324
ENSMUSG00000025997	protein_coding	Ikzf2	ENSMUST00000190016	protein_coding		1	-1	69685300	361
ENSMUSG00000030450	protein_coding	Oca2	ENSMUST00000155533	protein_coding		7	1	56239761	456
ENSMUSG00000066235	protein_coding	Pomgnt2	ENSMUST00000215084	protein_coding		9	-1	121996009	463
ENSMUSG00000022248	protein_coding	Rad1	ENSMUST00000170100	nonsense_mediated_decay		15	1	10486609	1073
ENSMUSG00000101982	transcribed_processed_pseudogene	Gm28990	ENSMUST00000188248	processed_transcript		Y	-1	65238023	543
ENSMUSG00000115037	lincRNA	Gm49262	ENSMUST00000228278	lincRNA		15	1	36629160	475
ENSMUSG00000101982	transcribed_processed_pseudogene	Gm28990	ENSMUST00000191219	transcribed_processed_pseudogene		Y	-1	65236469	615
ENSMUSG00000025997	protein_coding	Ikzf2	ENSMUST00000187870	retained_intron		1	-1	69684536	2170
ENSMUSG00000026347	protein_coding	Tmem163	ENSMUST00000160616	protein_coding	principal1	1	-1	127678021	2657
ENSMUSG00000029781	protein_coding	Fkbp9	ENSMUST00000031795	protein_coding	principal1	6	1	56832059	3009
ENSMUSG00000066235	protein_coding	Pomgnt2	ENSMUST00000215008	processed_transcript		9	-1	121996005	419
ENSMUSG00000025997	protein_coding	Ikzf2	ENSMUST00000188919	retained_intron		1	-1	69687140	1905
ENSMUSG00000099471	processed_pseudogene	Gm8451	ENSMUST00000170338	processed_pseudogene		1	-1	127283108	447
ENSMUSG00000115834	lincRNA	Gm10385	ENSMUST00000226323	lincRNA		15	1	36690103	3901
ENSMUSG00000100815	sense_intronic	Gm29112	ENSMUST00000188962	sense_intronic		1	-1	69598522	3487
ENSMUSG00000029781	protein_coding	Fkbp9	ENSMUST00000147159	retained_intron		6	1	56849333	549
ENSMUSG00000111785	lincRNA	Gm39464	ENSMUST00000214091	lincRNA		9	1	122047088	2169
ENSMUSG00000028927	protein_coding	Padi2	ENSMUST00000030765	protein_coding	principal1	4	1	140906344	4774
ENSMUSG00000104039	TEC	Gm37772	ENSMUST00000191635	TEC		1	1	127242091	1394
ENSMUSG00000111389	lincRNA	Gm39465	ENSMUST00000213810	lincRNA		9	-1	122051463	9813
ENSMUSG00000115127	lincRNA	Gm46515	ENSMUST00000226482	lincRNA		15	-1	36695665	289
ENSMUSG00000104378	TEC	Gm37510	ENSMUST00000194151	TEC		1	1	127270524	4762
ENSMUSG00000047953	protein_coding	Gp5	ENSMUST00000061190	protein_coding	principal1	16	-1	30310779	2197
ENSMUSG00000111389	lincRNA	Gm39465	ENSMUST00000215177	lincRNA		9	-1	122051358	470
ENSMUSG00000113919	lincRNA	Gm34466	ENSMUST00000222218	lincRNA		13	-1	45267711	505
ENSMUSG00000103351	processed_pseudogene	Gm6350	ENSMUST00000195099	processed_pseudogene		3	1	17269456	1339
ENSMUSG00000028927	protein_coding	Padi2	ENSMUST00000148160	processed_transcript		4	1	140924159	681
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000078615	protein_coding	principal3	17	1	34398821	1899
ENSMUSG00000116779	processed_pseudogene	Gm4829	ENSMUST00000231470	processed_pseudogene		17	-1	3101736	594
ENSMUSG00000028927	protein_coding	Padi2	ENSMUST00000130958	processed_transcript		4	1	140946412	344
ENSMUSG00000030450	protein_coding	Oca2	ENSMUST00000152693	nonsense_mediated_decay		7	1	56239777	2708
ENSMUSG00000038670	protein_coding	Mybpc2	ENSMUST00000165208	protein_coding	principal1	7	-1	44524656	3611
ENSMUSG00000087093	antisense	Gm15486	ENSMUST00000135147	antisense		1	-1	157511721	604
ENSMUSG00000022665	protein_coding	Ccdc80	ENSMUST00000139509	processed_transcript		16	1	45093402	363
ENSMUSG00000113772	lincRNA	Gm47448	ENSMUST00000220736	lincRNA		13	1	45235635	599
ENSMUSG00000030450	protein_coding	Oca2	ENSMUST00000156886	protein_coding		7	1	56239781	476
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000177499	retained_intron		8	1	4166567	1300
ENSMUSG00000113772	lincRNA	Gm47448	ENSMUST00000220694	lincRNA		13	1	45236391	488
ENSMUSG00000038670	protein_coding	Mybpc2	ENSMUST00000207516	protein_coding		7	-1	44509078	464
ENSMUSG00000113772	lincRNA	Gm47448	ENSMUST00000222925	lincRNA		13	1	45236411	574
ENSMUSG00000022665	protein_coding	Ccdc80	ENSMUST00000138048	processed_transcript		16	1	45093454	535
ENSMUSG00000030450	protein_coding	Oca2	ENSMUST00000144739	nonsense_mediated_decay		7	1	56239808	3374
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000224395	nonsense_mediated_decay		14	-1	30353486	9658
ENSMUSG00000036155	protein_coding	Mgat5	ENSMUST00000189427	retained_intron		1	1	127205015	2229
ENSMUSG00000112013	processed_pseudogene	Gm47967	ENSMUST00000220047	processed_pseudogene		10	1	54211734	1090
ENSMUSG00000022665	protein_coding	Ccdc80	ENSMUST00000155800	processed_transcript		16	1	45093590	411
ENSMUSG00000030450	protein_coding	Oca2	ENSMUST00000154559	processed_transcript		7	1	56306238	651
ENSMUSG00000112516	processed_pseudogene	Gm47968	ENSMUST00000218389	processed_pseudogene		10	1	54212871	3853
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000224785	protein_coding	alternative2	14	-1	30353527	7581
ENSMUSG00000040520	protein_coding	Manea	ENSMUST00000041374	protein_coding	principal1	4	-1	26346891	4867
ENSMUSG00000047146	protein_coding	Tet1	ENSMUST00000174189	protein_coding	principal2	10	-1	62899118	14369
ENSMUSG00000108773	antisense	Gm44506	ENSMUST00000206278	antisense		7	-1	56243150	965
ENSMUSG00000111434	sense_intronic	Gm47121	ENSMUST00000213905	sense_intronic		9	1	122142449	702
ENSMUSG00000112882	processed_pseudogene	Gm47970	ENSMUST00000218122	processed_pseudogene		10	-1	54671704	913
ENSMUSG00000040520	protein_coding	Manea	ENSMUST00000133105	processed_transcript		4	-1	26340895	820
ENSMUSG00000079625	protein_coding	Tm4sf19	ENSMUST00000115149	protein_coding	principal1	16	1	32400506	1257
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000238504	protein_coding	alternative2	14	-1	30353110	7128
ENSMUSG00000097980	lincRNA	Gm26972	ENSMUST00000183218	lincRNA		18	1	63399214	377
ENSMUSG00000040520	protein_coding	Manea	ENSMUST00000140492	processed_transcript		4	-1	26346854	433
ENSMUSG00000097980	lincRNA	Gm26972	ENSMUST00000236573	lincRNA		18	1	63399247	384
ENSMUSG00000070002	protein_coding	Ell	ENSMUST00000210155	protein_coding		8	1	70539457	457
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000142208	retained_intron		17	1	34398822	1108
ENSMUSG00000097980	lincRNA	Gm26972	ENSMUST00000235841	lincRNA		18	1	63399277	470
ENSMUSG00000040520	protein_coding	Manea	ENSMUST00000153813	protein_coding		4	-1	26346891	365
ENSMUSG00000097980	lincRNA	Gm26972	ENSMUST00000237281	lincRNA		18	1	63417254	1057
ENSMUSG00000047146	protein_coding	Tet1	ENSMUST00000174121	protein_coding		10	-1	62814540	1197
ENSMUSG00000112575	processed_pseudogene	Gm31849	ENSMUST00000220306	processed_pseudogene		10	1	55057193	375
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000223803	protein_coding	alternative2	14	-1	30352991	6408
ENSMUSG00000047146	protein_coding	Tet1	ENSMUST00000173905	nonsense_mediated_decay		10	-1	62814541	618
ENSMUSG00000027079	protein_coding	Clp1	ENSMUST00000028475	protein_coding	principal1	2	-1	84727350	1912
ENSMUSG00000107520	unprocessed_pseudogene	Gm3726	ENSMUST00000203110	unprocessed_pseudogene		7	-1	10414466	785
ENSMUSG00000112755	processed_pseudogene	Gm46190	ENSMUST00000219650	processed_pseudogene		10	1	55124362	427
ENSMUSG00000072814	protein_coding	Gm7982	ENSMUST00000154086	protein_coding		5	1	95742014	578
ENSMUSG00000047146	protein_coding	Tet1	ENSMUST00000173087	protein_coding		10	-1	62814539	581
ENSMUSG00000018189	protein_coding	Uchl5	ENSMUST00000189936	protein_coding	principal3	1	1	143777272	1696
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000142317	protein_coding		17	1	34417424	582
ENSMUSG00000096105	processed_pseudogene	Bhmt-ps1	ENSMUST00000178743	processed_pseudogene		4	-1	26370207	1224
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000224198	protein_coding	alternative2	14	-1	30353484	6928
ENSMUSG00000027079	protein_coding	Clp1	ENSMUST00000138231	processed_transcript		2	-1	84727276	1208
ENSMUSG00000117875	processed_pseudogene	Gm6789	ENSMUST00000237314	processed_pseudogene		18	-1	63545135	1385
ENSMUSG00000047146	protein_coding	Tet1	ENSMUST00000173081	processed_transcript		10	-1	62865304	1505
ENSMUSG00000099487	unprocessed_pseudogene	Gm21848	ENSMUST00000187722	unprocessed_pseudogene		Y	-1	65273275	696
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000225353	retained_intron		14	-1	30050249	635
ENSMUSG00000018189	protein_coding	Uchl5	ENSMUST00000185742	retained_intron		1	1	143777276	478
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000131998	processed_transcript		17	1	34418035	719
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000238735	processed_transcript		14	-1	30056514	568
ENSMUSG00000027079	protein_coding	Clp1	ENSMUST00000165219	protein_coding	principal1	2	-1	84727242	2564
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000135217	protein_coding		17	1	34418057	228
ENSMUSG00000072814	protein_coding	Gm7982	ENSMUST00000136313	protein_coding	principal5	5	1	95743794	1536
ENSMUSG00000043865	protein_coding	Tas2r118	ENSMUST00000062463	protein_coding	principal1	6	-1	23970060	900
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000238675	protein_coding		14	-1	30353509	7285
ENSMUSG00000072814	protein_coding	Gm7982	ENSMUST00000101011	protein_coding	alternative2	5	1	95743822	1443
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000223765	protein_coding	alternative2	17	1	34421853	737
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000223957	protein_coding	alternative2	17	1	34421870	434
ENSMUSG00000027132	protein_coding	Katnbl1	ENSMUST00000028552	protein_coding	principal1	2	1	112379211	2886
ENSMUSG00000047146	protein_coding	Tet1	ENSMUST00000218438	protein_coding		10	-1	62887324	414
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000238568	protein_coding		14	-1	30352964	5766
ENSMUSG00000034738	protein_coding	Nostrin	ENSMUST00000041865	protein_coding	principal1	2	1	69135800	1808
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000097348	protein_coding		17	1	34448320	470
ENSMUSG00000025503	protein_coding	Taldo1	ENSMUST00000211654	protein_coding		7	1	141392199	1362
ENSMUSG00000022665	protein_coding	Ccdc80	ENSMUST00000099498	protein_coding	principal1	16	1	45093612	4083
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000236732	nonsense_mediated_decay		17	1	34448767	1035
ENSMUSG00000047146	protein_coding	Tet1	ENSMUST00000228901	protein_coding		10	-1	62887512	361
ENSMUSG00000046716	protein_coding	Vmn1r67	ENSMUST00000226237	protein_coding	alternative2	7	1	10443331	2352
ENSMUSG00000057246	protein_coding	BC051142	ENSMUST00000235202	retained_intron		17	1	34454394	1140
ENSMUSG00000018189	protein_coding	Uchl5	ENSMUST00000018333	protein_coding	alternative1	1	1	143777281	1845
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000238571	protein_coding		14	-1	30099137	669
ENSMUSG00000047146	protein_coding	Tet1	ENSMUST00000227494	protein_coding		10	-1	62892986	553
ENSMUSG00000022665	protein_coding	Ccdc80	ENSMUST00000134924	processed_transcript		16	1	45093675	788
ENSMUSG00000046410	protein_coding	Kcnk6	ENSMUST00000085818	protein_coding	principal1	7	-1	29232515	4084
ENSMUSG00000047146	protein_coding	Tet1	ENSMUST00000218782	protein_coding		10	-1	62908996	463
ENSMUSG00000041202	protein_coding	Pla2g2d	ENSMUST00000030528	protein_coding	principal1	4	1	138775735	2167
ENSMUSG00000102462	unprocessed_pseudogene	Gm5542	ENSMUST00000195485	unprocessed_pseudogene		3	-1	94091906	1089
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000224912	nonsense_mediated_decay		14	-1	30100763	710
ENSMUSG00000046716	protein_coding	Vmn1r67	ENSMUST00000055964	protein_coding	principal2	7	1	10446789	2414
ENSMUSG00000034738	protein_coding	Nostrin	ENSMUST00000141276	processed_transcript		2	1	69179305	609
ENSMUSG00000027132	protein_coding	Katnbl1	ENSMUST00000151257	retained_intron		2	1	112379226	1734
ENSMUSG00000018189	protein_coding	Uchl5	ENSMUST00000189433	retained_intron		1	1	143777305	436
ENSMUSG00000022665	protein_coding	Ccdc80	ENSMUST00000061050	protein_coding	principal1	16	1	45094053	3648
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000238690	protein_coding		14	-1	30102258	850
ENSMUSG00000018189	protein_coding	Uchl5	ENSMUST00000185493	protein_coding		1	1	143777321	756
ENSMUSG00000025503	protein_coding	Taldo1	ENSMUST00000026576	protein_coding	principal1	7	1	141392199	1229
ENSMUSG00000111205	bidirectional_promoter_lncRNA	Gm39307	ENSMUST00000216780	bidirectional_promoter_lncRNA		9	1	22260102	1037
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000224073	processed_transcript		14	-1	30175391	1302
ENSMUSG00000108725	lincRNA	Gm45004	ENSMUST00000205302	lincRNA		7	-1	74043738	465
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000238336	protein_coding		14	-1	30142581	216
ENSMUSG00000104338	unprocessed_pseudogene	Gm9131	ENSMUST00000193557	unprocessed_pseudogene		3	1	94119979	1089
ENSMUSG00000046410	protein_coding	Kcnk6	ENSMUST00000208807	processed_transcript		7	-1	29231307	805
ENSMUSG00000082573	processed_pseudogene	Gm11903	ENSMUST00000118958	processed_pseudogene		4	1	26442461	727
ENSMUSG00000047146	protein_coding	Tet1	ENSMUST00000050826	protein_coding	alternative2	10	-1	62880014	13986
ENSMUSG00000041202	protein_coding	Pla2g2d	ENSMUST00000105806	protein_coding		4	1	138777894	1206
ENSMUSG00000031644	protein_coding	Nek1	ENSMUST00000120689	protein_coding	alternative2	8	1	60993195	5478
ENSMUSG00000102949	unprocessed_pseudogene	Gm37882	ENSMUST00000195254	unprocessed_pseudogene		3	-1	94123014	196
ENSMUSG00000025503	protein_coding	Taldo1	ENSMUST00000141793	retained_intron		7	1	141392243	829
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000238524	processed_transcript		14	-1	30164172	503
ENSMUSG00000018189	protein_coding	Uchl5	ENSMUST00000190258	retained_intron		1	1	143783625	798
ENSMUSG00000070002	protein_coding	Ell	ENSMUST00000093454	protein_coding	principal1	8	1	70539688	3072
ENSMUSG00000025503	protein_coding	Taldo1	ENSMUST00000211759	processed_transcript		7	1	141399428	915
ENSMUSG00000015968	protein_coding	Cacna1d	ENSMUST00000223985	retained_intron		14	-1	30491455	1223
ENSMUSG00000108577	processed_pseudogene	Gm17811	ENSMUST00000206193	processed_pseudogene		11	1	73389934	387
ENSMUSG00000101507	lincRNA	Gm29457	ENSMUST00000188224	lincRNA		Y	1	65315569	1499
ENSMUSG00000113425	lincRNA	Gm48653	ENSMUST00000222671	lincRNA		12	1	73355081	2263
ENSMUSG00000102311	unprocessed_pseudogene	Gm5543	ENSMUST00000193329	unprocessed_pseudogene		3	-1	94158721	1091
ENSMUSG00000104411	lincRNA	Gm30340	ENSMUST00000191898	lincRNA		3	-1	17334425	2198
ENSMUSG00000114705	processed_pseudogene	Gm18760	ENSMUST00000225370	processed_pseudogene		14	-1	30028351	665
ENSMUSG00000018189	protein_coding	Uchl5	ENSMUST00000191512	retained_intron		1	1	143794675	461
ENSMUSG00000085403	antisense	Gm13068	ENSMUST00000146250	antisense		4	1	149748518	876
ENSMUSG00000101507	lincRNA	Gm29457	ENSMUST00000189814	lincRNA		Y	1	65316022	438
ENSMUSG00000102285	unprocessed_pseudogene	Gm37001	ENSMUST00000193377	unprocessed_pseudogene		3	1	94166553	190
ENSMUSG00000114386	processed_pseudogene	Gm47576	ENSMUST00000224443	processed_pseudogene		14	1	30397994	450
ENSMUSG00000069824	polymorphic_pseudogene	Olfr377-ps1	ENSMUST00000134011	polymorphic_pseudogene	principal1	11	-1	73392214	1136
ENSMUSG00000031644	protein_coding	Nek1	ENSMUST00000034065	protein_coding	principal3	8	1	60993195	5401
ENSMUSG00000025503	protein_coding	Taldo1	ENSMUST00000125597	retained_intron		7	1	141400154	777
ENSMUSG00000085403	antisense	Gm13068	ENSMUST00000129397	antisense		4	1	149748532	581
ENSMUSG00000081985	processed_pseudogene	Gng2-ps1	ENSMUST00000120523	processed_pseudogene		4	-1	26501659	217
ENSMUSG00000114397	processed_pseudogene	Gm7621	ENSMUST00000225813	processed_pseudogene		14	1	30402002	901
ENSMUSG00000101916	processed_pseudogene	Gm18501	ENSMUST00000185363	processed_pseudogene		12	-1	103642069	664
ENSMUSG00000118408	processed_pseudogene	Gm30645	ENSMUST00000238284	processed_pseudogene		7	-1	10469693	961
ENSMUSG00000114670	processed_pseudogene	Gm18072	ENSMUST00000224661	processed_pseudogene		14	-1	30384354	552
ENSMUSG00000082138	processed_pseudogene	Gm11905	ENSMUST00000117653	processed_pseudogene		4	-1	26594167	678
ENSMUSG00000114966	processed_pseudogene	Gm18681	ENSMUST00000224520	processed_pseudogene		14	1	30423270	614
ENSMUSG00000073538	processed_transcript	E330020D12Rik	ENSMUST00000186785	retained_intron		1	-1	153407790	1964
ENSMUSG00000086327	antisense	Slfn5os	ENSMUST00000127074	antisense		11	-1	82960681	574
ENSMUSG00000116995	transcribed_processed_pseudogene	Gm21926	ENSMUST00000231317	processed_transcript		17	-1	3114750	1700
ENSMUSG00000086327	antisense	Slfn5os	ENSMUST00000216469	antisense		11	-1	82960626	550
ENSMUSG00000056133	protein_coding	Unc93a2	ENSMUST00000070059	protein_coding	principal1	17	-1	7385464	2649
ENSMUSG00000018189	protein_coding	Uchl5	ENSMUST00000185539	nonsense_mediated_decay		1	1	143794717	882
ENSMUSG00000116995	transcribed_processed_pseudogene	Gm21926	ENSMUST00000232277	transcribed_processed_pseudogene		17	-1	3104442	659
ENSMUSG00000085260	antisense	Med9os	ENSMUST00000129175	antisense		11	-1	59948091	298
ENSMUSG00000086257	lincRNA	4930548K13Rik	ENSMUST00000154459	lincRNA		4	-1	26705449	561
ENSMUSG00000116995	transcribed_processed_pseudogene	Gm21926	ENSMUST00000232087	processed_transcript		17	-1	3114795	1210
ENSMUSG00000054362	protein_coding	Lexm	ENSMUST00000126324	nonsense_mediated_decay		4	-1	106607395	380
ENSMUSG00000083447	processed_pseudogene	Gm11904	ENSMUST00000120562	processed_pseudogene		4	-1	27126509	248
ENSMUSG00000073538	processed_transcript	E330020D12Rik	ENSMUST00000188717	lincRNA		1	-1	153414233	766
ENSMUSG00000085260	antisense	Med9os	ENSMUST00000139794	antisense		11	-1	59948141	446
ENSMUSG00000073538	processed_transcript	E330020D12Rik	ENSMUST00000097535	processed_transcript		1	-1	153408429	1956
ENSMUSG00000092602	lincRNA	4931413I07Rik	ENSMUST00000173637	lincRNA		17	-1	33785724	764
ENSMUSG00000056133	protein_coding	Unc93a2	ENSMUST00000231922	nonsense_mediated_decay		17	-1	7385384	1271
ENSMUSG00000036155	protein_coding	Mgat5	ENSMUST00000038361	protein_coding	principal1	1	1	127205018	8436
ENSMUSG00000115986	lincRNA	Gm49439	ENSMUST00000229247	lincRNA		15	-1	42067553	645
ENSMUSG00000102646	processed_pseudogene	Gm19694	ENSMUST00000192364	processed_pseudogene		3	1	17395879	505
ENSMUSG00000085260	antisense	Med9os	ENSMUST00000146334	antisense		11	-1	59948142	527
ENSMUSG00000115986	lincRNA	Gm49439	ENSMUST00000229653	lincRNA		15	-1	42067546	483
ENSMUSG00000116199	TEC	Gm49438	ENSMUST00000229726	TEC		15	-1	42056140	925
ENSMUSG00000082059	processed_pseudogene	Gm15183	ENSMUST00000118933	processed_pseudogene		1	1	75542211	348
ENSMUSG00000110503	lincRNA	Gm45830	ENSMUST00000212945	lincRNA		8	1	49044280	344
ENSMUSG00000092152	protein_coding	Gm17026	ENSMUST00000166674	protein_coding	principal1	14	-1	42260048	1379
ENSMUSG00000036155	protein_coding	Mgat5	ENSMUST00000190921	retained_intron		1	1	127205028	2984
ENSMUSG00000116672	protein_coding	Gm49630	ENSMUST00000231397	protein_coding	principal1	17	-1	7371979	927
ENSMUSG00000112526	lincRNA	Gm35865	ENSMUST00000220180	lincRNA		10	-1	121705035	287
ENSMUSG00000111808	unprocessed_pseudogene	Gm18225	ENSMUST00000216708	unprocessed_pseudogene		9	-1	22296687	742
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000102491	protein_coding	principal1	4	-1	141053722	6582
ENSMUSG00000056359	lincRNA	D830013O20Rik	ENSMUST00000221180	lincRNA		12	-1	73409557	683
ENSMUSG00000036155	protein_coding	Mgat5	ENSMUST00000171405	protein_coding	principal1	1	1	127306762	3216
ENSMUSG00000105021	processed_pseudogene	Gm8234	ENSMUST00000198523	processed_pseudogene		3	1	58652053	1107
ENSMUSG00000056359	lincRNA	D830013O20Rik	ENSMUST00000070425	lincRNA		12	-1	73371445	338
ENSMUSG00000079722	protein_coding	Ttll2	ENSMUST00000115747	protein_coding	principal1	17	-1	7352696	1642
ENSMUSG00000116008	processed_pseudogene	Gm49440	ENSMUST00000230267	processed_pseudogene		15	-1	42161875	330
ENSMUSG00000110606	lincRNA	Gm45829	ENSMUST00000212466	lincRNA		8	1	49063879	334
ENSMUSG00000095371	protein_coding	Gm9611	ENSMUST00000169972	protein_coding		14	-1	42297358	1407
ENSMUSG00000115988	lincRNA	Gm49441	ENSMUST00000230284	lincRNA		15	1	42196784	1108
ENSMUSG00000095371	protein_coding	Gm9611	ENSMUST00000100698	protein_coding	principal1	14	-1	42294779	231
ENSMUSG00000103847	processed_pseudogene	Gm20056	ENSMUST00000194813	processed_pseudogene		16	1	32408536	519
ENSMUSG00000110465	TEC	Gm45832	ENSMUST00000212762	TEC		8	-1	49231969	1443
ENSMUSG00000030393	protein_coding	Zik1	ENSMUST00000032551	protein_coding	principal1	7	-1	10495394	4199
ENSMUSG00000047773	protein_coding	Ankfn1	ENSMUST00000208932	processed_transcript		11	-1	89418948	2665
ENSMUSG00000080958	processed_pseudogene	Gm11902	ENSMUST00000118849	processed_pseudogene		4	-1	27222404	270
ENSMUSG00000094157	protein_coding	Gm7995	ENSMUST00000171967	protein_coding		14	1	42310211	1239
ENSMUSG00000104529	lincRNA	Rbakdn	ENSMUST00000200314	lincRNA		5	-1	143165703	588
ENSMUSG00000110232	processed_pseudogene	Gm18193	ENSMUST00000210017	processed_pseudogene		7	-1	10498757	772
ENSMUSG00000094157	protein_coding	Gm7995	ENSMUST00000089789	protein_coding	principal1	14	1	42310210	429
ENSMUSG00000091099	unprocessed_pseudogene	Gm17164	ENSMUST00000169013	unprocessed_pseudogene		14	-1	42361450	506
ENSMUSG00000104529	lincRNA	Rbakdn	ENSMUST00000198334	lincRNA		5	-1	143165751	520
ENSMUSG00000028982	protein_coding	Slc25a33	ENSMUST00000105686	protein_coding	principal1	4	-1	149774277	1887
ENSMUSG00000090635	unprocessed_pseudogene	Gm2951	ENSMUST00000169447	unprocessed_pseudogene		14	-1	42373777	490
ENSMUSG00000090731	unprocessed_pseudogene	Gm2959	ENSMUST00000169844	unprocessed_pseudogene		14	1	42411451	621
ENSMUSG00000115103	lincRNA	Gm49263	ENSMUST00000226969	lincRNA		15	1	36723647	739
ENSMUSG00000053684	protein_coding	BC048403	ENSMUST00000065600	protein_coding	principal1	10	1	121739937	3123
ENSMUSG00000061650	protein_coding	Med9	ENSMUST00000081980	protein_coding	principal1	11	1	59948206	1920
ENSMUSG00000093580	processed_pseudogene	Gm20706	ENSMUST00000175985	processed_pseudogene		6	-1	24140363	2023
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000097816	protein_coding		4	-1	141060550	6273
ENSMUSG00000092148	protein_coding	Gm8005	ENSMUST00000167326	protein_coding	principal1	14	-1	42439673	1401
ENSMUSG00000084807	lincRNA	Gm13073	ENSMUST00000134059	lincRNA		4	-1	149780714	486
ENSMUSG00000066829	protein_coding	Zfp810	ENSMUST00000086278	protein_coding	principal1	9	-1	22307638	3238
ENSMUSG00000114402	processed_pseudogene	Gm49360	ENSMUST00000224985	processed_pseudogene		14	1	42452905	178
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000126973	retained_intron		4	-1	141018800	815
ENSMUSG00000085368	lincRNA	Gm16188	ENSMUST00000142019	lincRNA		4	1	149776252	420
ENSMUSG00000053684	protein_coding	BC048403	ENSMUST00000136432	protein_coding		10	1	121739938	2968
ENSMUSG00000081601	processed_pseudogene	Gm13065	ENSMUST00000119178	processed_pseudogene		4	-1	149793419	141
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000124286	retained_intron		4	-1	141022516	958
ENSMUSG00000066829	protein_coding	Zfp810	ENSMUST00000215202	protein_coding		9	-1	22307648	822
ENSMUSG00000053684	protein_coding	BC048403	ENSMUST00000138630	processed_transcript		10	1	121750880	691
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000137721	retained_intron		4	-1	141022546	680
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000043273	protein_coding	principal1	7	1	30563321	884
ENSMUSG00000094954	protein_coding	Gm8011	ENSMUST00000172163	protein_coding	principal1	14	1	42463881	1751
ENSMUSG00000066829	protein_coding	Zfp810	ENSMUST00000214499	retained_intron		9	-1	22283903	2534
ENSMUSG00000115985	processed_pseudogene	Gm18531	ENSMUST00000230056	processed_pseudogene		15	-1	42256780	718
ENSMUSG00000090481	unprocessed_pseudogene	Gm2966	ENSMUST00000166052	unprocessed_pseudogene		14	-1	42487658	481
ENSMUSG00000066829	protein_coding	Zfp810	ENSMUST00000217563	processed_transcript		9	-1	22306968	718
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000126863	retained_intron		4	-1	141058109	819
ENSMUSG00000111292	TEC	Gm48627	ENSMUST00000216615	TEC		9	-1	22295572	1351
ENSMUSG00000116245	lincRNA	Gm49452	ENSMUST00000230321	lincRNA		15	-1	42320346	644
ENSMUSG00000045672	protein_coding	Col27a1	ENSMUST00000125504	retained_intron		4	1	63214004	4580
ENSMUSG00000097251	antisense	5033417F24Rik	ENSMUST00000181575	antisense		1	-1	92910764	1787
ENSMUSG00000045672	protein_coding	Col27a1	ENSMUST00000148751	retained_intron		4	1	63215412	4916
ENSMUSG00000049892	protein_coding	Rasd1	ENSMUST00000062405	protein_coding	principal1	11	-1	59964944	1611
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000163654	protein_coding		7	1	30563325	781
ENSMUSG00000105336	processed_pseudogene	AU022133	ENSMUST00000200601	processed_pseudogene		3	-1	58666566	873
ENSMUSG00000090690	protein_coding	Gm8020	ENSMUST00000170174	protein_coding	principal1	14	-1	42502349	1406
ENSMUSG00000116323	processed_pseudogene	Gm18092	ENSMUST00000229093	processed_pseudogene		15	-1	42329420	820
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000144196	protein_coding		4	-1	141060545	542
ENSMUSG00000054362	protein_coding	Lexm	ENSMUST00000067387	nonsense_mediated_decay		4	-1	106617241	1552
ENSMUSG00000115894	processed_pseudogene	Gm49453	ENSMUST00000229218	processed_pseudogene		15	1	42399755	673
ENSMUSG00000113582	lincRNA	Gm33929	ENSMUST00000221762	lincRNA		12	1	73448318	367
ENSMUSG00000047067	protein_coding	Dusp28	ENSMUST00000060913	protein_coding	principal1	1	1	92906981	1314
ENSMUSG00000021879	protein_coding	Dnah12	ENSMUST00000022433	protein_coding	principal1	14	1	26693274	12009
ENSMUSG00000114178	lincRNA	Gm48656	ENSMUST00000221516	lincRNA		12	-1	73456907	797
ENSMUSG00000083173	processed_pseudogene	Gm13064	ENSMUST00000119125	processed_pseudogene		4	-1	149815222	557
ENSMUSG00000113099	lincRNA	Gm34016	ENSMUST00000222678	lincRNA		12	-1	73508670	1384
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000119215	protein_coding		9	1	122117266	1082
ENSMUSG00000054362	protein_coding	Lexm	ENSMUST00000106788	protein_coding	principal1	4	-1	106617238	1569
ENSMUSG00000021879	protein_coding	Dnah12	ENSMUST00000073309	protein_coding		14	1	26771029	611
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000168157	protein_coding		4	-1	141058199	6244
ENSMUSG00000054362	protein_coding	Lexm	ENSMUST00000189032	protein_coding	principal1	4	-1	106617238	1549
ENSMUSG00000105604	antisense	Gm42838	ENSMUST00000196503	antisense		5	1	125057841	439
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000146832	protein_coding		9	1	122117283	641
ENSMUSG00000021569	protein_coding	Trip13	ENSMUST00000022053	protein_coding	principal1	13	-1	73937784	3399
ENSMUSG00000031644	protein_coding	Nek1	ENSMUST00000125717	retained_intron		8	1	60993200	2068
ENSMUSG00000040860	protein_coding	Crocc	ENSMUST00000040222	protein_coding		4	-1	141053661	6248
ENSMUSG00000036432	protein_coding	Siah2	ENSMUST00000070368	protein_coding	principal1	3	-1	58692400	2511
ENSMUSG00000047773	protein_coding	Ankfn1	ENSMUST00000238273	protein_coding		11	-1	89841266	4289
ENSMUSG00000106663	antisense	Gm42839	ENSMUST00000198978	antisense		5	1	125086841	525
ENSMUSG00000047773	protein_coding	Ankfn1	ENSMUST00000207815	protein_coding		11	-1	89526647	3250
ENSMUSG00000110137	TEC	Gm45577	ENSMUST00000210206	TEC		8	-1	49464739	2287
ENSMUSG00000115182	lincRNA	Gm49128	ENSMUST00000227358	lincRNA		15	-1	17076939	605
ENSMUSG00000021569	protein_coding	Trip13	ENSMUST00000222156	nonsense_mediated_decay		13	-1	73921214	1469
ENSMUSG00000115173	processed_pseudogene	Gm2638	ENSMUST00000228569	processed_pseudogene		15	-1	17897697	875
ENSMUSG00000115192	processed_pseudogene	Gm18532	ENSMUST00000228890	processed_pseudogene		15	1	18007430	416
ENSMUSG00000047773	protein_coding	Ankfn1	ENSMUST00000128717	protein_coding	principal1	11	-1	89696845	2391
ENSMUSG00000047773	protein_coding	Ankfn1	ENSMUST00000207350	nonsense_mediated_decay		11	-1	89696886	523
ENSMUSG00000036432	protein_coding	Siah2	ENSMUST00000145032	processed_transcript		3	-1	58686037	756
ENSMUSG00000115492	lincRNA	Gm41277	ENSMUST00000226302	lincRNA		15	-1	18064111	873
ENSMUSG00000047773	protein_coding	Ankfn1	ENSMUST00000207171	retained_intron		11	-1	89777653	1032
ENSMUSG00000021569	protein_coding	Trip13	ENSMUST00000223017	nonsense_mediated_decay		13	-1	73936197	382
ENSMUSG00000078566	protein_coding	Bnip3	ENSMUST00000106112	protein_coding	principal1	7	-1	138909506	1756
ENSMUSG00000031559	lincRNA	4930555F03Rik	ENSMUST00000143556	lincRNA		8	1	49370886	524
ENSMUSG00000028626	protein_coding	Col9a2	ENSMUST00000030372	protein_coding	principal1	4	1	121039385	2924
ENSMUSG00000031559	lincRNA	4930555F03Rik	ENSMUST00000212179	lincRNA		8	1	49370886	1257
ENSMUSG00000047773	protein_coding	Ankfn1	ENSMUST00000050983	protein_coding		11	-1	89418948	2665
ENSMUSG00000026043	protein_coding	Col3a1	ENSMUST00000087883	protein_coding	principal1	1	1	45311538	5564
ENSMUSG00000078566	protein_coding	Bnip3	ENSMUST00000130500	protein_coding		7	-1	138909495	719
ENSMUSG00000070498	protein_coding	Tmem132b	ENSMUST00000185104	protein_coding		5	1	125531774	540
ENSMUSG00000047773	protein_coding	Ankfn1	ENSMUST00000169201	protein_coding		11	-1	89538556	2232
ENSMUSG00000031559	lincRNA	4930555F03Rik	ENSMUST00000033963	lincRNA		8	1	49370913	717
ENSMUSG00000078566	protein_coding	Bnip3	ENSMUST00000141223	retained_intron		7	-1	138898276	388
ENSMUSG00000101860	protein_coding	Mindy4b-ps	ENSMUST00000191174	retained_intron		3	-1	58792019	2173
ENSMUSG00000078566	protein_coding	Bnip3	ENSMUST00000148970	retained_intron		7	-1	138909519	446
ENSMUSG00000028626	protein_coding	Col9a2	ENSMUST00000151987	retained_intron		4	1	121039748	492
ENSMUSG00000031644	protein_coding	Nek1	ENSMUST00000155664	retained_intron		8	1	60993239	3562
ENSMUSG00000031559	lincRNA	4930555F03Rik	ENSMUST00000126285	lincRNA		8	1	49485481	3604
ENSMUSG00000072813	protein_coding	E330014E10Rik	ENSMUST00000071182	protein_coding	principal1	5	1	95775990	2476
ENSMUSG00000098987	processed_pseudogene	Gm8982	ENSMUST00000184198	processed_pseudogene		7	1	106123174	1295
ENSMUSG00000031559	lincRNA	4930555F03Rik	ENSMUST00000163925	lincRNA		8	1	49463323	375
ENSMUSG00000078566	protein_coding	Bnip3	ENSMUST00000125359	processed_transcript		7	-1	138909479	293
ENSMUSG00000026043	protein_coding	Col3a1	ENSMUST00000189818	processed_transcript		1	1	45311647	1610
ENSMUSG00000028626	protein_coding	Col9a2	ENSMUST00000140119	processed_transcript		4	1	121052999	752
ENSMUSG00000110688	TEC	Gm45696	ENSMUST00000212088	TEC		8	1	49521424	985
ENSMUSG00000031644	protein_coding	Nek1	ENSMUST00000140444	retained_intron		8	1	60993241	2464
ENSMUSG00000009772	protein_coding	Nuak2	ENSMUST00000072177	protein_coding	alternative2	1	1	132316126	2936
ENSMUSG00000031644	protein_coding	Nek1	ENSMUST00000154313	retained_intron		8	1	60993241	3102
ENSMUSG00000109881	antisense	Gm45507	ENSMUST00000210611	antisense		7	1	138890964	519
ENSMUSG00000026043	protein_coding	Col3a1	ENSMUST00000123204	retained_intron		1	1	45327589	570
ENSMUSG00000110564	TEC	Gm45697	ENSMUST00000212893	TEC		8	-1	49488645	2876
ENSMUSG00000101860	protein_coding	Mindy4b-ps	ENSMUST00000212169	protein_coding		3	-1	58811943	888
ENSMUSG00000110237	processed_pseudogene	Gm18258	ENSMUST00000210413	processed_pseudogene		7	1	138899388	542
ENSMUSG00000038056	protein_coding	Kmt2c	ENSMUST00000174734	protein_coding		5	-1	25300075	6443
ENSMUSG00000101860	protein_coding	Mindy4b-ps	ENSMUST00000191233	protein_coding	principal1	3	-1	58822311	1374
ENSMUSG00000031644	protein_coding	Nek1	ENSMUST00000211256	protein_coding	alternative2	8	1	60993265	4810
ENSMUSG00000087455	processed_transcript	5330411J11Rik	ENSMUST00000137162	processed_transcript		2	-1	59386682	1635
ENSMUSG00000105226	TEC	A930028O11Rik	ENSMUST00000197219	TEC		3	1	58697561	1108
ENSMUSG00000031644	protein_coding	Nek1	ENSMUST00000211672	protein_coding	alternative2	8	1	60993265	5109
ENSMUSG00000034435	protein_coding	Tmem30b	ENSMUST00000042975	protein_coding	principal1	12	-1	73546392	2991
ENSMUSG00000087455	processed_transcript	5330411J11Rik	ENSMUST00000155111	processed_transcript		2	-1	59387471	463
ENSMUSG00000009772	protein_coding	Nuak2	ENSMUST00000082125	protein_coding	principal3	1	1	132316126	3107
ENSMUSG00000083276	processed_pseudogene	Gm13551	ENSMUST00000121286	processed_pseudogene		2	1	59396488	430
ENSMUSG00000026043	protein_coding	Col3a1	ENSMUST00000190943	retained_intron		1	1	45334200	431
ENSMUSG00000026043	protein_coding	Col3a1	ENSMUST00000185687	protein_coding		1	1	45335766	583
ENSMUSG00000116596	processed_pseudogene	Gm49798	ENSMUST00000231485	processed_pseudogene		17	-1	3124801	247
ENSMUSG00000031644	protein_coding	Nek1	ENSMUST00000142601	processed_transcript		8	1	61049835	753
ENSMUSG00000009772	protein_coding	Nuak2	ENSMUST00000128661	processed_transcript		1	1	132316165	623
ENSMUSG00000070498	protein_coding	Tmem132b	ENSMUST00000031446	protein_coding	principal1	5	1	125532387	7995
ENSMUSG00000116941	processed_pseudogene	Gm46578	ENSMUST00000232579	processed_pseudogene		17	-1	3130512	355
ENSMUSG00000097725	lincRNA	4930593A02Rik	ENSMUST00000203879	lincRNA		3	1	58692589	938
ENSMUSG00000113800	lincRNA	2210039B01Rik	ENSMUST00000222490	lincRNA		12	1	73548478	1044
ENSMUSG00000026043	protein_coding	Col3a1	ENSMUST00000186021	protein_coding		1	1	45339958	737
ENSMUSG00000116874	lincRNA	Gm34035	ENSMUST00000232068	lincRNA		17	-1	3283207	798
ENSMUSG00000009772	protein_coding	Nuak2	ENSMUST00000133246	retained_intron		1	1	132327596	812
ENSMUSG00000097725	lincRNA	4930593A02Rik	ENSMUST00000181694	lincRNA		3	1	58732830	1437
ENSMUSG00000070498	protein_coding	Tmem132b	ENSMUST00000184422	retained_intron		5	1	125622488	1222
ENSMUSG00000116874	lincRNA	Gm34035	ENSMUST00000231652	lincRNA		17	-1	3283270	566
ENSMUSG00000106805	unprocessed_pseudogene	Gm42714	ENSMUST00000202063	unprocessed_pseudogene		5	-1	95837450	1364
ENSMUSG00000069823	protein_coding	Olfr1	ENSMUST00000120303	protein_coding	principal1	11	-1	73399614	3433
ENSMUSG00000113880	protein_coding	A030005L19Rik	ENSMUST00000220768	protein_coding	principal1	1	1	82913325	806
ENSMUSG00000080982	processed_pseudogene	Gm13549	ENSMUST00000118339	processed_pseudogene		2	-1	59399781	796
ENSMUSG00000046201	protein_coding	Scaf8	ENSMUST00000232079	processed_transcript		17	1	3114972	1511
ENSMUSG00000113973	protein_coding	A030014E15Rik	ENSMUST00000223400	protein_coding	principal1	1	1	82924917	796
ENSMUSG00000069823	protein_coding	Olfr1	ENSMUST00000131253	protein_coding		11	-1	73399495	924
ENSMUSG00000113846	protein_coding	Gm6217	ENSMUST00000222182	protein_coding	principal1	1	-1	82931399	829
ENSMUSG00000096617	processed_pseudogene	Gm5559	ENSMUST00000180755	processed_pseudogene		5	1	95861714	1002
ENSMUSG00000098222	processed_pseudogene	Gm8318	ENSMUST00000182954	processed_pseudogene		15	1	18163881	872
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000168222	retained_intron		7	1	30563326	715
ENSMUSG00000079093	protein_coding	4930449I24Rik	ENSMUST00000110598	protein_coding	principal1	5	1	146502399	1168
ENSMUSG00000098150	processed_transcript	4921515E04Rik	ENSMUST00000183117	lincRNA		15	-1	18259800	1227
ENSMUSG00000023075	protein_coding	Akirin1	ENSMUST00000102636	protein_coding	principal1	4	-1	123750345	3052
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000166510	protein_coding		7	1	30563326	835
ENSMUSG00000116707	TEC	Gm49590	ENSMUST00000232286	TEC		16	-1	78343468	2713
ENSMUSG00000028284	protein_coding	Map3k7	ENSMUST00000037607	protein_coding	alternative1	4	1	31964097	5773
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000164438	retained_intron		7	1	30563329	635
ENSMUSG00000098150	processed_transcript	4921515E04Rik	ENSMUST00000226383	lincRNA		15	-1	18368248	1738
ENSMUSG00000023075	protein_coding	Akirin1	ENSMUST00000142778	processed_transcript		4	-1	123743507	477
ENSMUSG00000116017	processed_pseudogene	Gm18154	ENSMUST00000229370	processed_pseudogene		15	1	61826247	589
ENSMUSG00000103610	TEC	Gm37947	ENSMUST00000192740	TEC		15	-1	61983302	894
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000169911	retained_intron		7	1	30563330	656
ENSMUSG00000098150	processed_transcript	4921515E04Rik	ENSMUST00000227364	lincRNA		15	-1	18369627	2309
ENSMUSG00000029700	protein_coding	Slc13a1	ENSMUST00000031713	protein_coding	principal1	6	-1	24168092	2495
ENSMUSG00000023075	protein_coding	Akirin1	ENSMUST00000153472	processed_transcript		4	-1	123750231	763
ENSMUSG00000098150	processed_transcript	4921515E04Rik	ENSMUST00000228926	retained_intron		15	-1	18368238	1105
ENSMUSG00000021495	protein_coding	Fam193b	ENSMUST00000225703	retained_intron		13	-1	55543320	1234
ENSMUSG00000018800	protein_coding	Abca5	ENSMUST00000043961	protein_coding	principal1	11	-1	110337678	8231
ENSMUSG00000091083	processed_pseudogene	Gm4535	ENSMUST00000182274	processed_pseudogene		7	1	141406637	558
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000163276	nonsense_mediated_decay		7	1	30563336	502
ENSMUSG00000028284	protein_coding	Map3k7	ENSMUST00000080933	protein_coding	principal3	4	1	31964120	5669
ENSMUSG00000042694	protein_coding	Stn1	ENSMUST00000049369	protein_coding	principal1	19	-1	47537119	1992
ENSMUSG00000026989	protein_coding	Dapl1	ENSMUST00000028369	protein_coding	principal1	2	1	59484653	573
ENSMUSG00000018800	protein_coding	Abca5	ENSMUST00000124714	protein_coding		11	-1	110337622	3829
ENSMUSG00000028284	protein_coding	Map3k7	ENSMUST00000108183	protein_coding		4	1	31964257	5416
ENSMUSG00000038056	protein_coding	Kmt2c	ENSMUST00000172556	protein_coding		5	-1	25308550	6486
ENSMUSG00000028284	protein_coding	Map3k7	ENSMUST00000108184	protein_coding		4	1	31964263	5491
ENSMUSG00000042694	protein_coding	Stn1	ENSMUST00000182873	processed_transcript		19	-1	47508773	802
ENSMUSG00000026989	protein_coding	Dapl1	ENSMUST00000144415	processed_transcript		2	1	59484669	663
ENSMUSG00000042694	protein_coding	Stn1	ENSMUST00000182808	protein_coding		19	-1	47537036	1618
ENSMUSG00000029700	protein_coding	Slc13a1	ENSMUST00000174594	processed_transcript		6	-1	24108574	1562
ENSMUSG00000029700	protein_coding	Slc13a1	ENSMUST00000177412	retained_intron		6	-1	24108571	3143
ENSMUSG00000100415	lincRNA	Gm28089	ENSMUST00000187266	lincRNA		Y	-1	30616388	1498
ENSMUSG00000060807	protein_coding	Serpina6	ENSMUST00000044159	protein_coding	principal1	12	-1	103657212	1605
ENSMUSG00000029700	protein_coding	Slc13a1	ENSMUST00000176692	retained_intron		6	-1	24168090	2598
ENSMUSG00000018800	protein_coding	Abca5	ENSMUST00000148984	processed_transcript		11	-1	110337716	2684
ENSMUSG00000084163	processed_pseudogene	Gm11901	ENSMUST00000120412	processed_pseudogene		4	1	27543178	437
ENSMUSG00000100415	lincRNA	Gm28089	ENSMUST00000190956	lincRNA		Y	-1	30615936	621
ENSMUSG00000018800	protein_coding	Abca5	ENSMUST00000134721	protein_coding		11	-1	110337640	610
ENSMUSG00000100415	lincRNA	Gm28089	ENSMUST00000185769	lincRNA		Y	-1	30615936	437
ENSMUSG00000022309	protein_coding	Angpt1	ENSMUST00000022921	protein_coding	principal1	15	-1	42676977	4260
ENSMUSG00000028284	protein_coding	Map3k7	ENSMUST00000131114	processed_transcript		4	1	31977348	612
ENSMUSG00000060807	protein_coding	Serpina6	ENSMUST00000152517	protein_coding		12	-1	103657102	356
ENSMUSG00000041505	protein_coding	Gm3402	ENSMUST00000200228	protein_coding	principal2	5	1	146514123	1154
ENSMUSG00000022865	protein_coding	Cxadr	ENSMUST00000232148	protein_coding		16	1	78301489	650
ENSMUSG00000028284	protein_coding	Map3k7	ENSMUST00000143138	processed_transcript		4	1	31979498	538
ENSMUSG00000093595	unprocessed_pseudogene	Vmn1r-ps49	ENSMUST00000177009	unprocessed_pseudogene		7	-1	10550435	879
ENSMUSG00000022309	protein_coding	Angpt1	ENSMUST00000227738	processed_transcript		15	-1	42676749	1530
ENSMUSG00000047031	protein_coding	Vmn1r68	ENSMUST00000238012	nonsense_mediated_decay		7	-1	10558485	5319
ENSMUSG00000041505	protein_coding	Gm3402	ENSMUST00000036715	protein_coding	alternative2	5	1	146514151	981
ENSMUSG00000101775	lincRNA	Gm28088	ENSMUST00000187402	lincRNA		Y	-1	30645319	1493
ENSMUSG00000018800	protein_coding	Abca5	ENSMUST00000127318	retained_intron		11	-1	110337645	3580
ENSMUSG00000047031	protein_coding	Vmn1r68	ENSMUST00000235324	nonsense_mediated_decay		7	-1	10558485	3379
ENSMUSG00000041505	protein_coding	Gm3402	ENSMUST00000077133	protein_coding	alternative2	5	1	146514151	924
ENSMUSG00000047031	protein_coding	Vmn1r68	ENSMUST00000238003	nonsense_mediated_decay		7	-1	10558485	4622
ENSMUSG00000097805	antisense	Gm17473	ENSMUST00000180585	antisense		15	1	42676241	2216
ENSMUSG00000097805	antisense	Gm17473	ENSMUST00000228544	antisense		15	1	42676325	2071
ENSMUSG00000047031	protein_coding	Vmn1r68	ENSMUST00000236246	protein_coding	principal1	7	-1	10558485	7024
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000118886	protein_coding	principal1	9	1	122117300	4811
ENSMUSG00000086278	transcribed_unprocessed_pseudogene	Olfr75-ps1	ENSMUST00000144832	processed_transcript		11	-1	73409858	2655
ENSMUSG00000100658	lincRNA	F730311O21Rik	ENSMUST00000189288	lincRNA		1	1	132342023	5447
ENSMUSG00000042694	protein_coding	Stn1	ENSMUST00000182431	processed_transcript		19	-1	47536964	558
ENSMUSG00000101775	lincRNA	Gm28088	ENSMUST00000188537	lincRNA		Y	-1	30644866	431
ENSMUSG00000101775	lincRNA	Gm28088	ENSMUST00000185998	lincRNA		Y	-1	30644866	612
ENSMUSG00000047031	protein_coding	Vmn1r68	ENSMUST00000058362	protein_coding	principal1	7	-1	10528169	960
ENSMUSG00000086278	transcribed_unprocessed_pseudogene	Olfr75-ps1	ENSMUST00000141956	processed_transcript		11	-1	73409887	2500
ENSMUSG00000042694	protein_coding	Stn1	ENSMUST00000182251	processed_transcript		19	-1	47536896	523
ENSMUSG00000086278	transcribed_unprocessed_pseudogene	Olfr75-ps1	ENSMUST00000135477	transcribed_unprocessed_pseudogene		11	-1	73406379	938
ENSMUSG00000082674	processed_pseudogene	Gm11914	ENSMUST00000117094	processed_pseudogene		4	-1	27867655	507
ENSMUSG00000042694	protein_coding	Stn1	ENSMUST00000183004	retained_intron		19	-1	47537094	1107
ENSMUSG00000028284	protein_coding	Map3k7	ENSMUST00000147462	processed_transcript		4	1	31985667	821
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000120173	protein_coding	principal1	9	1	122117303	4758
ENSMUSG00000080175	processed_pseudogene	Tpm3-rs2	ENSMUST00000116350	processed_pseudogene		4	-1	27996905	323
ENSMUSG00000046201	protein_coding	Scaf8	ENSMUST00000076734	protein_coding	principal1	17	1	3114979	4866
ENSMUSG00000028284	protein_coding	Map3k7	ENSMUST00000126632	processed_transcript		4	1	31981576	865
ENSMUSG00000042694	protein_coding	Stn1	ENSMUST00000182291	protein_coding		19	-1	47537507	748
ENSMUSG00000023078	protein_coding	Cxcl13	ENSMUST00000023840	protein_coding	principal1	5	1	95956951	1150
ENSMUSG00000042694	protein_coding	Stn1	ENSMUST00000182654	processed_transcript		19	-1	47536262	430
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000217631	processed_transcript		9	1	122117304	494
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000125064	retained_intron		11	-1	98728834	4577
ENSMUSG00000028284	protein_coding	Map3k7	ENSMUST00000131310	processed_transcript		4	1	31992473	590
ENSMUSG00000046201	protein_coding	Scaf8	ENSMUST00000232048	protein_coding		17	1	3115249	544
ENSMUSG00000107092	processed_pseudogene	Gm7993	ENSMUST00000200970	processed_pseudogene		5	1	95974240	1384
ENSMUSG00000084201	processed_pseudogene	Gm11926	ENSMUST00000118520	processed_pseudogene		4	-1	31991286	430
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000139181	protein_coding		9	1	122117310	572
ENSMUSG00000042694	protein_coding	Stn1	ENSMUST00000182714	protein_coding		19	-1	47537046	690
ENSMUSG00000116858	lincRNA	Gm49797	ENSMUST00000231685	lincRNA		17	1	3198110	1354
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000215432	processed_transcript		9	1	122117318	379
ENSMUSG00000042694	protein_coding	Stn1	ENSMUST00000183283	processed_transcript		19	-1	47537024	132
ENSMUSG00000102131	unprocessed_pseudogene	Gm21160	ENSMUST00000185838	unprocessed_pseudogene		Y	1	69352610	696
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000134949	protein_coding		9	1	122117347	1664
ENSMUSG00000092583	unprocessed_pseudogene	Vmn2r-ps53	ENSMUST00000173045	unprocessed_pseudogene		7	1	12445358	2353
ENSMUSG00000097990	antisense	Gm19557	ENSMUST00000182109	antisense		19	1	47512982	2765
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000142784	processed_transcript		9	1	122117752	546
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000131169	retained_intron		9	1	122160072	755
ENSMUSG00000113620	lincRNA	7420701I03Rik	ENSMUST00000222157	lincRNA		12	1	11047813	737
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000151872	retained_intron		9	1	122163869	438
ENSMUSG00000038145	protein_coding	Snrk	ENSMUST00000145384	processed_transcript		9	1	122166744	615
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000239400	protein_coding		8	1	4166567	1542
ENSMUSG00000116858	lincRNA	Gm49797	ENSMUST00000231987	lincRNA		17	1	3228397	905
ENSMUSG00000111605	TEC	4632418H02Rik	ENSMUST00000217287	TEC		9	1	122127294	2721
ENSMUSG00000116858	lincRNA	Gm49797	ENSMUST00000232042	lincRNA		17	1	3231271	3114
ENSMUSG00000111003	TEC	Gm47122	ENSMUST00000217153	TEC		9	1	122119145	351
ENSMUSG00000098934	unprocessed_pseudogene	Gm18853	ENSMUST00000183629	unprocessed_pseudogene		7	-1	106189999	3596
ENSMUSG00000005124	protein_coding	Ccn4	ENSMUST00000005255	protein_coding	principal1	15	1	66891320	5097
ENSMUSG00000093993	protein_coding	Gm20736	ENSMUST00000190282	protein_coding	principal2	Y	1	65377690	836
ENSMUSG00000045868	protein_coding	Gvin1	ENSMUST00000006667	protein_coding	principal1	7	-1	106215310	8795
ENSMUSG00000045868	protein_coding	Gvin1	ENSMUST00000183409	protein_coding	principal1	7	-1	106215326	9005
ENSMUSG00000021495	protein_coding	Fam193b	ENSMUST00000225240	protein_coding	alternative2	13	-1	55571100	2950
ENSMUSG00000018845	protein_coding	Unc45b	ENSMUST00000108160	protein_coding	alternative1	11	1	82910550	4152
ENSMUSG00000005124	protein_coding	Ccn4	ENSMUST00000147079	nonsense_mediated_decay		15	1	66891387	1714
ENSMUSG00000093993	protein_coding	Gm20736	ENSMUST00000185550	protein_coding	alternative2	Y	1	65377702	923
ENSMUSG00000093993	protein_coding	Gm20736	ENSMUST00000178198	protein_coding	principal2	Y	1	65379124	567
ENSMUSG00000005124	protein_coding	Ccn4	ENSMUST00000118823	protein_coding		15	1	66891508	708
ENSMUSG00000104242	processed_pseudogene	Gm38154	ENSMUST00000195444	processed_pseudogene		3	1	17670688	340
ENSMUSG00000082977	processed_pseudogene	Gm11911	ENSMUST00000117938	processed_pseudogene		4	1	28067177	1023
ENSMUSG00000022865	protein_coding	Cxadr	ENSMUST00000023572	protein_coding	principal3	16	1	78301496	5742
ENSMUSG00000018845	protein_coding	Unc45b	ENSMUST00000125499	processed_transcript		11	1	82928959	446
ENSMUSG00000082703	processed_pseudogene	Gm11907	ENSMUST00000118918	processed_pseudogene		4	1	28353783	1007
ENSMUSG00000098945	processed_pseudogene	Gm27150	ENSMUST00000183441	processed_pseudogene		7	-1	106287482	1038
ENSMUSG00000097392	protein_coding	Thoc2l	ENSMUST00000239420	protein_coding	principal1	5	1	104508350	9445
ENSMUSG00000028575	protein_coding	Eqtn	ENSMUST00000107097	protein_coding	alternative2	4	-1	94928843	1164
ENSMUSG00000105036	TEC	1110060G06Rik	ENSMUST00000200372	TEC		5	1	20728394	499
ENSMUSG00000018845	protein_coding	Unc45b	ENSMUST00000142336	processed_transcript		11	1	82933602	498
ENSMUSG00000097392	protein_coding	Thoc2l	ENSMUST00000239307	protein_coding	principal1	5	1	104508350	9550
ENSMUSG00000095457	unprocessed_pseudogene	Gm8989	ENSMUST00000184782	unprocessed_pseudogene		7	-1	106330688	7275
ENSMUSG00000005124	protein_coding	Ccn4	ENSMUST00000230535	processed_transcript		15	1	66909264	930
ENSMUSG00000005124	protein_coding	Ccn4	ENSMUST00000229246	processed_transcript		15	1	66909286	851
ENSMUSG00000005124	protein_coding	Ccn4	ENSMUST00000133863	processed_transcript		15	1	66909311	957
ENSMUSG00000097392	protein_coding	Thoc2l	ENSMUST00000197606	processed_transcript		5	1	104523677	4282
ENSMUSG00000097392	protein_coding	Thoc2l	ENSMUST00000181620	processed_transcript		5	1	104525735	3805
ENSMUSG00000053541	unprocessed_pseudogene	Gm4759	ENSMUST00000183414	unprocessed_pseudogene		7	-1	106424469	6622
ENSMUSG00000097392	protein_coding	Thoc2l	ENSMUST00000200034	processed_transcript		5	1	104525869	605
ENSMUSG00000028575	protein_coding	Eqtn	ENSMUST00000030309	protein_coding	principal3	4	-1	94928794	1074
ENSMUSG00000021495	protein_coding	Fam193b	ENSMUST00000021957	protein_coding	principal2	13	-1	55571120	4341
ENSMUSG00000097392	protein_coding	Thoc2l	ENSMUST00000181418	processed_transcript		5	1	104540571	1986
ENSMUSG00000111623	TEC	Gm48303	ENSMUST00000215491	TEC		9	1	21247713	1894
ENSMUSG00000041390	protein_coding	Mdfic	ENSMUST00000101663	protein_coding	principal1	6	1	15720661	3431
ENSMUSG00000031093	protein_coding	Dock11	ENSMUST00000033419	protein_coding	principal1	X	1	35888832	6665
ENSMUSG00000063286	transcribed_unprocessed_pseudogene	Gm8995	ENSMUST00000208417	processed_transcript		7	-1	106507728	3490
ENSMUSG00000063286	transcribed_unprocessed_pseudogene	Gm8995	ENSMUST00000184842	transcribed_unprocessed_pseudogene		7	-1	106511671	7280
ENSMUSG00000097392	protein_coding	Thoc2l	ENSMUST00000196593	processed_transcript		5	1	104541183	756
ENSMUSG00000041390	protein_coding	Mdfic	ENSMUST00000190255	protein_coding		6	1	15720661	3431
ENSMUSG00000018845	protein_coding	Unc45b	ENSMUST00000018989	protein_coding	principal2	11	1	82911253	3549
ENSMUSG00000022865	protein_coding	Cxadr	ENSMUST00000114229	protein_coding	alternative2	16	1	78301756	1657
ENSMUSG00000021495	protein_coding	Fam193b	ENSMUST00000224486	retained_intron		13	-1	55552329	4786
ENSMUSG00000031093	protein_coding	Dock11	ENSMUST00000115266	protein_coding		X	1	35947397	6047
ENSMUSG00000018845	protein_coding	Unc45b	ENSMUST00000164945	protein_coding	alternative1	11	1	82911253	3555
ENSMUSG00000073902	unprocessed_pseudogene	Gm1966	ENSMUST00000184540	unprocessed_pseudogene		7	-1	106604035	7293
ENSMUSG00000097392	protein_coding	Thoc2l	ENSMUST00000096452	protein_coding	principal1	5	1	104508352	5181
ENSMUSG00000021495	protein_coding	Fam193b	ENSMUST00000224249	protein_coding		13	-1	55543467	727
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000168229	nonsense_mediated_decay		7	1	30563338	566
ENSMUSG00000028478	protein_coding	Clta	ENSMUST00000107846	protein_coding	alternative1	4	1	44004452	1710
ENSMUSG00000022865	protein_coding	Cxadr	ENSMUST00000231356	protein_coding		16	1	78301759	1298
ENSMUSG00000118625	transcribed_unprocessed_pseudogene	AC123687.1	ENSMUST00000239343	transcribed_unprocessed_pseudogene		5	1	104526458	475
ENSMUSG00000021495	protein_coding	Fam193b	ENSMUST00000224572	retained_intron		13	-1	55542929	805
ENSMUSG00000054404	protein_coding	Slfn5	ENSMUST00000150687	processed_transcript		11	1	82951349	360
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000168555	nonsense_mediated_decay		7	1	30563339	883
ENSMUSG00000022865	protein_coding	Cxadr	ENSMUST00000232189	retained_intron		16	1	78325207	678
ENSMUSG00000051680	protein_coding	Olfr693	ENSMUST00000215541	protein_coding	principal1	7	-1	106680584	4015
ENSMUSG00000108673	unprocessed_pseudogene	Gm44922	ENSMUST00000206690	unprocessed_pseudogene		11	-1	73413408	90
ENSMUSG00000021495	protein_coding	Fam193b	ENSMUST00000224275	processed_transcript		13	-1	55569958	624
ENSMUSG00000045087	protein_coding	S1pr5	ENSMUST00000122088	protein_coding	principal1	9	-1	21248443	2500
ENSMUSG00000041390	protein_coding	Mdfic	ENSMUST00000140516	nonsense_mediated_decay		6	1	15720703	2401
ENSMUSG00000031093	protein_coding	Dock11	ENSMUST00000145757	retained_intron		X	1	35974888	2970
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000170453	retained_intron		7	1	30563340	410
ENSMUSG00000021495	protein_coding	Fam193b	ENSMUST00000225262	retained_intron		13	-1	55558908	3945
ENSMUSG00000051680	protein_coding	Olfr693	ENSMUST00000057817	protein_coding	principal1	7	-1	106678485	952
ENSMUSG00000041390	protein_coding	Mdfic	ENSMUST00000125326	protein_coding		6	1	15720721	3635
ENSMUSG00000022865	protein_coding	Cxadr	ENSMUST00000231251	nonsense_mediated_decay		16	1	78329025	688
ENSMUSG00000031093	protein_coding	Dock11	ENSMUST00000140175	retained_intron		X	1	36011427	619
ENSMUSG00000041390	protein_coding	Mdfic	ENSMUST00000120512	protein_coding	principal1	6	1	15721087	1871
ENSMUSG00000031093	protein_coding	Dock11	ENSMUST00000115264	protein_coding		X	1	36041238	1725
ENSMUSG00000028478	protein_coding	Clta	ENSMUST00000107847	protein_coding	alternative1	4	1	44012638	1121
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000165773	retained_intron		7	1	30563342	874
ENSMUSG00000118439	processed_pseudogene	Gm50468	ENSMUST00000238773	processed_pseudogene		X	-1	36025180	272
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000161018	processed_transcript		13	1	55105311	602
ENSMUSG00000020941	protein_coding	Map3k14	ENSMUST00000021324	protein_coding	principal1	11	-1	103267472	4246
ENSMUSG00000041390	protein_coding	Mdfic	ENSMUST00000128849	protein_coding		6	1	15727799	522
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000167501	nonsense_mediated_decay		7	1	30563344	505
ENSMUSG00000071179	protein_coding	Serpina16	ENSMUST00000164148	protein_coding	principal1	12	-1	103676139	1582
ENSMUSG00000041390	protein_coding	Mdfic	ENSMUST00000189359	protein_coding	principal1	6	1	15720661	3435
ENSMUSG00000020941	protein_coding	Map3k14	ENSMUST00000146163	processed_transcript		11	-1	103221847	734
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000169071	retained_intron		7	1	30563346	629
ENSMUSG00000071179	protein_coding	Serpina16	ENSMUST00000095451	protein_coding	principal1	12	-1	103675464	1257
ENSMUSG00000043102	protein_coding	Qrfp	ENSMUST00000057407	protein_coding	principal1	2	-1	31810580	2927
ENSMUSG00000020941	protein_coding	Map3k14	ENSMUST00000152300	processed_transcript		11	-1	103242271	2961
ENSMUSG00000100321	lincRNA	Gm29579	ENSMUST00000190820	lincRNA		Y	-1	30676728	166
ENSMUSG00000100252	lincRNA	Mir124-2hg	ENSMUST00000188983	lincRNA		3	1	17789921	1365
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000163482	protein_coding		7	1	30563348	668
ENSMUSG00000020941	protein_coding	Map3k14	ENSMUST00000152677	processed_transcript		11	-1	103240134	722
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000211335	retained_intron		16	-1	78254536	1924
ENSMUSG00000108046	TEC	Gm43924	ENSMUST00000204851	TEC		6	1	15811323	1736
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000167024	retained_intron		7	1	30563349	562
ENSMUSG00000078635	processed_transcript	1700028N14Rik	ENSMUST00000139621	processed_transcript		11	-1	103267745	747
ENSMUSG00000055971	protein_coding	Olfr378	ENSMUST00000069790	protein_coding	principal1	11	-1	73428477	1508
ENSMUSG00000100252	lincRNA	Mir124-2hg	ENSMUST00000189868	lincRNA		3	1	17789957	535
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000167361	protein_coding		7	1	30563350	860
ENSMUSG00000100252	lincRNA	Mir124-2hg	ENSMUST00000186746	lincRNA		3	1	17793920	1368
ENSMUSG00000054404	protein_coding	Slfn5	ENSMUST00000108158	protein_coding		11	1	82952095	1263
ENSMUSG00000039062	protein_coding	Anpep	ENSMUST00000107392	protein_coding	principal1	7	-1	79848210	3797
ENSMUSG00000084387	polymorphic_pseudogene	Olfr379-ps1	ENSMUST00000117349	polymorphic_pseudogene	principal1	11	-1	73434224	934
ENSMUSG00000100252	lincRNA	Mir124-2hg	ENSMUST00000189754	lincRNA		3	1	17793928	525
ENSMUSG00000039062	protein_coding	Anpep	ENSMUST00000206682	retained_intron		7	-1	79825499	770
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000176149	protein_coding	principal5	8	1	4166567	3938
ENSMUSG00000021306	protein_coding	Gpr137b	ENSMUST00000021738	protein_coding	principal2	13	-1	13393614	2971
ENSMUSG00000100252	lincRNA	Mir124-2hg	ENSMUST00000186923	lincRNA		3	1	17793945	673
ENSMUSG00000100252	lincRNA	Mir124-2hg	ENSMUST00000189467	lincRNA		3	1	17794896	173
ENSMUSG00000039062	protein_coding	Anpep	ENSMUST00000205502	protein_coding		7	-1	79848183	746
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000176072	protein_coding		8	1	4166574	3932
ENSMUSG00000028478	protein_coding	Clta	ENSMUST00000107849	protein_coding	alternative1	4	1	44012678	1099
ENSMUSG00000039062	protein_coding	Anpep	ENSMUST00000206235	protein_coding		7	-1	79861059	746
ENSMUSG00000028478	protein_coding	Clta	ENSMUST00000107851	protein_coding	principal4	4	1	44012678	1135
ENSMUSG00000100252	lincRNA	Mir124-2hg	ENSMUST00000185804	lincRNA		3	1	17795744	3844
ENSMUSG00000039062	protein_coding	Anpep	ENSMUST00000149164	processed_transcript		7	-1	79848193	178
ENSMUSG00000078773	protein_coding	Rad54b	ENSMUST00000179498	processed_transcript		4	1	11558922	434
ENSMUSG00000021306	protein_coding	Gpr137b	ENSMUST00000222958	nonsense_mediated_decay		13	-1	13393595	2975
ENSMUSG00000067424	protein_coding	Zfp563	ENSMUST00000131722	protein_coding	principal1	17	1	33089310	6440
ENSMUSG00000028478	protein_coding	Clta	ENSMUST00000107845	protein_coding	alternative1	4	1	44012686	1031
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000166257	protein_coding		7	1	30563356	546
ENSMUSG00000021306	protein_coding	Gpr137b	ENSMUST00000223093	nonsense_mediated_decay		13	-1	13393564	2351
ENSMUSG00000054404	protein_coding	Slfn5	ENSMUST00000067443	protein_coding	principal1	11	1	82952102	5979
ENSMUSG00000021306	protein_coding	Gpr137b	ENSMUST00000220628	protein_coding	alternative2	13	-1	13393624	3634
ENSMUSG00000039062	protein_coding	Anpep	ENSMUST00000049004	protein_coding	principal1	7	-1	79842352	3422
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000163464	protein_coding		7	1	30563356	651
ENSMUSG00000021306	protein_coding	Gpr137b	ENSMUST00000222482	retained_intron		13	-1	13367805	410
ENSMUSG00000067424	protein_coding	Zfp563	ENSMUST00000153072	protein_coding		17	1	33089564	414
ENSMUSG00000108476	TEC	Gm44974	ENSMUST00000206387	TEC		7	-1	79831871	1279
ENSMUSG00000054404	protein_coding	Slfn5	ENSMUST00000108157	protein_coding	principal1	11	1	82954661	3007
ENSMUSG00000021306	protein_coding	Gpr137b	ENSMUST00000221340	processed_transcript		13	-1	13394014	518
ENSMUSG00000028478	protein_coding	Clta	ENSMUST00000170241	protein_coding	alternative1	4	1	44012643	1079
ENSMUSG00000021306	protein_coding	Gpr137b	ENSMUST00000221498	processed_transcript		13	-1	13391728	483
ENSMUSG00000067424	protein_coding	Zfp563	ENSMUST00000140829	protein_coding		17	1	33092458	758
ENSMUSG00000043333	protein_coding	Rhbdl2	ENSMUST00000124290	processed_transcript		4	1	123787874	1683
ENSMUSG00000086058	processed_transcript	Unc45bos	ENSMUST00000156395	processed_transcript		11	-1	82933382	1306
ENSMUSG00000043333	protein_coding	Rhbdl2	ENSMUST00000150286	processed_transcript		4	1	123798205	331
ENSMUSG00000026723	protein_coding	Trdmt1	ENSMUST00000124488	protein_coding	principal1	2	-1	13544668	3788
ENSMUSG00000030310	protein_coding	Slc6a1	ENSMUST00000032454	protein_coding	principal1	6	1	114282635	4302
ENSMUSG00000117966	TEC	1700061A03Rik	ENSMUST00000236526	TEC		19	-1	5489198	455
ENSMUSG00000094699	unprocessed_pseudogene	Gm28637	ENSMUST00000179424	unprocessed_pseudogene		Y	1	69380245	345
ENSMUSG00000100659	unprocessed_pseudogene	Gm28636	ENSMUST00000186353	unprocessed_pseudogene		Y	-1	69449750	696
ENSMUSG00000026723	protein_coding	Trdmt1	ENSMUST00000028055	processed_transcript		2	-1	13544650	879
ENSMUSG00000107534	sense_intronic	Gm43920	ENSMUST00000204953	sense_intronic		6	1	83962277	2159
ENSMUSG00000030310	protein_coding	Slc6a1	ENSMUST00000204600	retained_intron		6	1	114282790	3449
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000176764	nonsense_mediated_decay		8	1	4166587	4058
ENSMUSG00000026723	protein_coding	Trdmt1	ENSMUST00000144957	nonsense_mediated_decay		2	-1	13544663	495
ENSMUSG00000107991	processed_pseudogene	Gm43919	ENSMUST00000204303	processed_pseudogene		6	1	83896959	364
ENSMUSG00000082359	processed_pseudogene	Gm11908	ENSMUST00000117755	processed_pseudogene		4	-1	28486458	347
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000145791	protein_coding	principal1	19	-1	3905230	2729
ENSMUSG00000028080	protein_coding	Lrba	ENSMUST00000192145	protein_coding	alternative2	3	1	86224680	8843
ENSMUSG00000079501	processed_pseudogene	Gm5138	ENSMUST00000113842	processed_pseudogene		6	-1	83875380	1002
ENSMUSG00000081579	processed_pseudogene	Gm11909	ENSMUST00000121424	processed_pseudogene		4	-1	28560706	759
ENSMUSG00000001157	protein_coding	Gmcl1	ENSMUST00000001185	protein_coding	principal1	6	-1	86733383	2949
ENSMUSG00000043333	protein_coding	Rhbdl2	ENSMUST00000106204	protein_coding	principal1	4	1	123809914	1120
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000211605	antisense		16	-1	78265952	1038
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000211650	antisense		16	-1	78265980	1225
ENSMUSG00000084073	processed_pseudogene	Gm11910	ENSMUST00000121624	processed_pseudogene		4	-1	28592571	432
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000210839	antisense		16	-1	78275039	1361
ENSMUSG00000043333	protein_coding	Rhbdl2	ENSMUST00000148797	processed_transcript		4	1	123813335	576
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000209498	antisense		16	-1	78275278	1403
ENSMUSG00000030310	protein_coding	Slc6a1	ENSMUST00000204278	retained_intron		6	1	114282790	2275
ENSMUSG00000041592	protein_coding	Sdk2	ENSMUST00000041627	protein_coding	principal1	11	-1	114066218	11287
ENSMUSG00000001157	protein_coding	Gmcl1	ENSMUST00000203741	retained_intron		6	-1	86716893	2750
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000209468	antisense		16	-1	78302487	1107
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000126070	protein_coding	principal1	19	-1	3906991	3041
ENSMUSG00000043333	protein_coding	Rhbdl2	ENSMUST00000053202	protein_coding	principal1	4	1	123787875	1217
ENSMUSG00000100956	unprocessed_pseudogene	Gm28558	ENSMUST00000187373	unprocessed_pseudogene		Y	-1	65464796	696
ENSMUSG00000030310	protein_coding	Slc6a1	ENSMUST00000203330	processed_transcript		6	1	114300014	400
ENSMUSG00000001157	protein_coding	Gmcl1	ENSMUST00000135880	retained_intron		6	-1	86718606	779
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000231981	antisense		16	-1	78295015	1074
ENSMUSG00000030310	protein_coding	Slc6a1	ENSMUST00000203100	retained_intron		6	1	114301235	708
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000168333	nonsense_mediated_decay		7	1	30563356	590
ENSMUSG00000083214	processed_pseudogene	Gm11912	ENSMUST00000117235	processed_pseudogene		4	1	28592576	264
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000211317	antisense		16	-1	78275080	1062
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000171850	protein_coding		7	1	30563356	564
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000231644	antisense		16	-1	78294969	802
ENSMUSG00000001157	protein_coding	Gmcl1	ENSMUST00000113679	protein_coding		6	-1	86733240	960
ENSMUSG00000081011	processed_pseudogene	Gm11913	ENSMUST00000119094	processed_pseudogene		4	1	28612326	336
ENSMUSG00000030310	protein_coding	Slc6a1	ENSMUST00000204074	protein_coding		6	1	114301863	1740
ENSMUSG00000078773	protein_coding	Rad54b	ENSMUST00000095145	protein_coding		4	1	11558942	2403
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000231730	antisense		16	-1	78275000	524
ENSMUSG00000086275	antisense	1700121C08Rik	ENSMUST00000137546	antisense		4	-1	123859513	677
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000176462	retained_intron		8	1	4166601	2216
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000232400	antisense		16	-1	78294987	715
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000204415	protein_coding		6	1	83867109	604
ENSMUSG00000030310	protein_coding	Slc6a1	ENSMUST00000204540	retained_intron		6	1	114313289	722
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000231747	antisense		16	-1	78295150	739
ENSMUSG00000078773	protein_coding	Rad54b	ENSMUST00000108306	protein_coding		4	1	11558949	652
ENSMUSG00000100942	processed_pseudogene	Gm28560	ENSMUST00000186091	processed_pseudogene		Y	-1	65501409	315
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000176825	protein_coding	alternative2	8	1	4166739	3728
ENSMUSG00000082310	processed_pseudogene	Gm12904	ENSMUST00000117451	processed_pseudogene		4	1	123838104	1399
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000135070	nonsense_mediated_decay		19	-1	3907112	2424
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000231226	antisense		16	-1	78295022	494
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000168931	protein_coding		7	1	30563358	405
ENSMUSG00000109841	processed_transcript	E330011O21Rik	ENSMUST00000210555	antisense		16	-1	78275054	455
ENSMUSG00000100333	lincRNA	Gm28561	ENSMUST00000189366	lincRNA		Y	-1	65506157	2167
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000177077	retained_intron		8	1	4187188	732
ENSMUSG00000031449	protein_coding	Atp4b	ENSMUST00000033826	protein_coding	principal1	8	-1	13396825	1378
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000166864	processed_transcript		7	1	30563358	353
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000203273	nonsense_mediated_decay		6	1	83867110	422
ENSMUSG00000034059	protein_coding	Ypel4	ENSMUST00000238573	protein_coding		2	1	84734058	1585
ENSMUSG00000073761	lincRNA	4933427I04Rik	ENSMUST00000097896	lincRNA		4	1	123859679	2183
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000001801	protein_coding	principal1	19	-1	3907133	2688
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000165543	retained_intron		7	1	30563360	519
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000177309	processed_transcript		8	1	4191292	1654
ENSMUSG00000056201	protein_coding	Cfl1	ENSMUST00000209469	protein_coding	principal1	19	1	5490455	2354
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000167202	protein_coding		7	1	30563367	399
ENSMUSG00000031449	protein_coding	Atp4b	ENSMUST00000210491	retained_intron		8	-1	13396776	709
ENSMUSG00000080993	processed_pseudogene	Gm12903	ENSMUST00000121015	processed_pseudogene		4	1	123902422	544
ENSMUSG00000110311	TEC	Gm45410	ENSMUST00000211331	TEC		8	1	13391106	1093
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000177455	retained_intron		8	1	4200800	720
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000169283	retained_intron		7	1	30563378	728
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000122885	nonsense_mediated_decay		19	-1	3902023	1233
ENSMUSG00000056201	protein_coding	Cfl1	ENSMUST00000236645	retained_intron		19	1	5490516	736
ENSMUSG00000041592	protein_coding	Sdk2	ENSMUST00000155651	processed_transcript		11	-1	114067046	4155
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000169962	retained_intron		7	1	30563393	568
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000164365	nonsense_mediated_decay		7	1	30563395	500
ENSMUSG00000041592	protein_coding	Sdk2	ENSMUST00000141943	protein_coding		11	-1	114065975	2783
ENSMUSG00000056201	protein_coding	Cfl1	ENSMUST00000237122	protein_coding		19	1	5490565	771
ENSMUSG00000034059	protein_coding	Ypel4	ENSMUST00000090729	protein_coding	principal1	2	1	84734058	1676
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000165722	nonsense_mediated_decay		7	1	30563397	572
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000162688	retained_intron		19	-1	3897230	467
ENSMUSG00000041592	protein_coding	Sdk2	ENSMUST00000144301	processed_transcript		11	-1	114067029	3083
ENSMUSG00000113223	unprocessed_pseudogene	Gm48147	ENSMUST00000221445	unprocessed_pseudogene		12	1	99904928	351
ENSMUSG00000021737	protein_coding	Psmd6	ENSMUST00000022256	protein_coding	principal1	14	-1	14120984	1387
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000165009	retained_intron		7	1	30563826	626
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000134698	retained_intron		19	-1	3897831	463
ENSMUSG00000071636	protein_coding	Rimbp3	ENSMUST00000169803	protein_coding	principal1	16	1	17208603	5380
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000171364	retained_intron		7	1	30563871	202
ENSMUSG00000041592	protein_coding	Sdk2	ENSMUST00000125879	processed_transcript		11	-1	113826219	681
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000126643	retained_intron		19	-1	3898853	568
ENSMUSG00000034059	protein_coding	Ypel4	ENSMUST00000111643	nonsense_mediated_decay		2	1	84734098	1592
ENSMUSG00000021737	protein_coding	Psmd6	ENSMUST00000153237	retained_intron		14	-1	14116550	658
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000175650	retained_intron		8	1	4203375	2451
ENSMUSG00000056201	protein_coding	Cfl1	ENSMUST00000116560	protein_coding		19	1	5490485	1148
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000132164	nonsense_mediated_decay		19	-1	3903355	813
ENSMUSG00000022863	protein_coding	Btg3	ENSMUST00000231353	protein_coding		16	-1	78373336	3013
ENSMUSG00000021737	protein_coding	Psmd6	ENSMUST00000224955	protein_coding		14	-1	14120106	576
ENSMUSG00000025575	protein_coding	Cant1	ENSMUST00000017620	protein_coding	principal1	11	-1	118419086	4182
ENSMUSG00000034059	protein_coding	Ypel4	ENSMUST00000151399	processed_transcript		2	1	84734123	797
ENSMUSG00000078765	protein_coding	U2af1l4	ENSMUST00000165524	retained_intron		7	1	30563879	582
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000176186	retained_intron		8	1	4203619	849
ENSMUSG00000041592	protein_coding	Sdk2	ENSMUST00000156955	processed_transcript		11	-1	113810423	546
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000159824	retained_intron		19	-1	3903246	692
ENSMUSG00000021737	protein_coding	Psmd6	ENSMUST00000127228	retained_intron		14	-1	14117352	810
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000177085	retained_intron		8	1	4205729	542
ENSMUSG00000021737	protein_coding	Psmd6	ENSMUST00000224076	retained_intron		14	-1	14120636	816
ENSMUSG00000021177	protein_coding	Tdp1	ENSMUST00000151019	retained_intron		12	1	99884517	3945
ENSMUSG00000021737	protein_coding	Psmd6	ENSMUST00000147471	retained_intron		14	-1	14120933	755
ENSMUSG00000034059	protein_coding	Ypel4	ENSMUST00000151647	retained_intron		2	1	84734227	1813
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000176645	protein_coding		8	1	4206249	1012
ENSMUSG00000021347	protein_coding	Prl7b1	ENSMUST00000080595	protein_coding	principal1	13	-1	27610582	925
ENSMUSG00000011832	protein_coding	Evi5l	ENSMUST00000177053	protein_coding		8	1	4166567	1542
ENSMUSG00000021177	protein_coding	Tdp1	ENSMUST00000125639	processed_transcript		12	1	99884534	867
ENSMUSG00000118544	unitary_pseudogene	AC161166.1	ENSMUST00000238918	unitary_pseudogene		7	-1	24529842	480
ENSMUSG00000022863	protein_coding	Btg3	ENSMUST00000023570	protein_coding	principal1	16	-1	78376810	1414
ENSMUSG00000022863	protein_coding	Btg3	ENSMUST00000148124	protein_coding		16	-1	78377192	442
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000125792	retained_intron		19	-1	3907040	1066
ENSMUSG00000086805	antisense	4932443L11Rik	ENSMUST00000177130	antisense		8	-1	4206882	2827
ENSMUSG00000034919	protein_coding	Ttc22	ENSMUST00000047922	protein_coding	principal1	4	1	106622432	2554
ENSMUSG00000086805	antisense	4932443L11Rik	ENSMUST00000148353	antisense		8	-1	4206287	414
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000127308	retained_intron		19	-1	3904421	923
ENSMUSG00000116798	processed_pseudogene	Gm49591	ENSMUST00000231924	processed_pseudogene		16	1	78251053	525
ENSMUSG00000025575	protein_coding	Cant1	ENSMUST00000092378	protein_coding	principal1	11	-1	118419023	2995
ENSMUSG00000046192	protein_coding	Iqub	ENSMUST00000052277	protein_coding	principal1	6	-1	24515067	3651
ENSMUSG00000001750	protein_coding	Tcirg1	ENSMUST00000236590	protein_coding		19	-1	3906240	333
ENSMUSG00000078773	protein_coding	Rad54b	ENSMUST00000070755	protein_coding	principal1	4	1	11558972	2870
ENSMUSG00000100262	lincRNA	Gm28398	ENSMUST00000186587	lincRNA		Y	1	7299029	166
ENSMUSG00000034919	protein_coding	Ttc22	ENSMUST00000136505	processed_transcript		4	1	106635977	965
ENSMUSG00000100453	unprocessed_pseudogene	Gm28397	ENSMUST00000187970	unprocessed_pseudogene		Y	-1	7340940	699
ENSMUSG00000103127	TEC	Gm37386	ENSMUST00000194755	TEC		4	-1	8454247	72
ENSMUSG00000100126	lincRNA	Gm29584	ENSMUST00000190181	lincRNA		Y	1	65538170	1498
ENSMUSG00000078773	protein_coding	Rad54b	ENSMUST00000179731	processed_transcript		4	1	11576643	447
ENSMUSG00000041037	protein_coding	Irgq	ENSMUST00000049020	protein_coding	principal1	7	1	24530689	6083
ENSMUSG00000097214	unprocessed_pseudogene	Gm19791	ENSMUST00000180398	unprocessed_pseudogene		10	1	22110621	859
ENSMUSG00000082151	processed_pseudogene	Gm11810	ENSMUST00000118311	processed_pseudogene		4	-1	8456498	333
ENSMUSG00000100126	lincRNA	Gm29584	ENSMUST00000185252	lincRNA		Y	1	65538623	437
ENSMUSG00000026589	protein_coding	Sec16b	ENSMUST00000086130	protein_coding	principal1	1	1	157506728	4661
ENSMUSG00000097795	processed_pseudogene	Gm7678	ENSMUST00000181879	processed_pseudogene		10	1	22124496	943
ENSMUSG00000100858	processed_pseudogene	Gm28400	ENSMUST00000191332	processed_pseudogene		Y	-1	7354149	380
ENSMUSG00000101679	unprocessed_pseudogene	Gm20936	ENSMUST00000191049	unprocessed_pseudogene		Y	-1	65649174	658
ENSMUSG00000099965	unprocessed_pseudogene	Gm28399	ENSMUST00000186221	unprocessed_pseudogene		Y	-1	7377469	318
ENSMUSG00000025575	protein_coding	Cant1	ENSMUST00000106289	protein_coding		11	-1	118419023	1600
ENSMUSG00000097496	antisense	Gm26653	ENSMUST00000181537	antisense		6	1	136173061	1214
ENSMUSG00000097327	protein_coding	E030030I06Rik	ENSMUST00000180726	processed_transcript		10	-1	22148819	1630
ENSMUSG00000078773	protein_coding	Rad54b	ENSMUST00000178725	nonsense_mediated_decay		4	1	11595893	801
ENSMUSG00000056185	protein_coding	Snx32	ENSMUST00000237945	retained_intron		19	-1	5510496	2229
ENSMUSG00000097327	protein_coding	E030030I06Rik	ENSMUST00000181677	processed_transcript		10	-1	22148610	617
ENSMUSG00000025575	protein_coding	Cant1	ENSMUST00000106287	protein_coding	principal1	11	-1	118419052	1476
ENSMUSG00000100948	lincRNA	Gm28395	ENSMUST00000187794	lincRNA		Y	-1	7382220	2168
ENSMUSG00000099434	unprocessed_pseudogene	Gm20934	ENSMUST00000190359	unprocessed_pseudogene		Y	-1	65723919	696
ENSMUSG00000078773	protein_coding	Rad54b	ENSMUST00000144499	retained_intron		4	1	11609375	702
ENSMUSG00000097327	protein_coding	E030030I06Rik	ENSMUST00000181614	processed_transcript		10	-1	22148823	548
ENSMUSG00000056185	protein_coding	Snx32	ENSMUST00000237924	retained_intron		19	-1	5510507	3023
ENSMUSG00000086614	antisense	Gm14330	ENSMUST00000155455	antisense		6	1	135875505	455
ENSMUSG00000026589	protein_coding	Sec16b	ENSMUST00000027881	protein_coding	principal1	1	1	157506810	4414
ENSMUSG00000097327	protein_coding	E030030I06Rik	ENSMUST00000180697	transcribed_unprocessed_pseudogene		10	-1	22148697	209
ENSMUSG00000025575	protein_coding	Cant1	ENSMUST00000164927	protein_coding	principal1	11	-1	118415794	1379
ENSMUSG00000118447	unprocessed_pseudogene	Gm21788	ENSMUST00000238493	unprocessed_pseudogene		Y	1	7405010	543
ENSMUSG00000109378	protein_coding	Gm49396	ENSMUST00000167042	nonsense_mediated_decay	principal5	7	1	30563344	3007
ENSMUSG00000097327	protein_coding	E030030I06Rik	ENSMUST00000179054	protein_coding	principal4	10	-1	22149270	2081
ENSMUSG00000086103	antisense	Gm11832	ENSMUST00000148576	antisense		4	-1	11615007	432
ENSMUSG00000086239	lincRNA	Gm14329	ENSMUST00000136027	lincRNA		6	1	135732870	591
ENSMUSG00000097327	protein_coding	E030030I06Rik	ENSMUST00000069372	protein_coding	alternative2	10	-1	22149270	876
ENSMUSG00000026589	protein_coding	Sec16b	ENSMUST00000111700	protein_coding	principal1	1	1	157526147	4369
ENSMUSG00000025575	protein_coding	Cant1	ENSMUST00000106288	protein_coding	principal1	11	-1	118419052	2873
ENSMUSG00000100961	lincRNA	Gm28394	ENSMUST00000186805	lincRNA		Y	1	7415351	1495
ENSMUSG00000100806	processed_pseudogene	Gm28396	ENSMUST00000190309	processed_pseudogene		Y	1	7464101	379
ENSMUSG00000026589	protein_coding	Sec16b	ENSMUST00000146873	protein_coding		1	1	157533131	2586
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000163658	protein_coding	principal2	7	-1	10581487	2558
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000161315	protein_coding		13	1	55105314	483
ENSMUSG00000028080	protein_coding	Lrba	ENSMUST00000194759	protein_coding	alternative2	3	1	86224680	9379
ENSMUSG00000026589	protein_coding	Sec16b	ENSMUST00000155665	retained_intron		1	1	157538051	391
ENSMUSG00000101521	lincRNA	Gm28393	ENSMUST00000191261	lincRNA		Y	1	7552848	1498
ENSMUSG00000109378	protein_coding	Gm49396	ENSMUST00000108161	nonsense_mediated_decay	alternative2	7	1	30563350	2890
ENSMUSG00000094595	protein_coding	Fsbp	ENSMUST00000180239	protein_coding	principal1	4	1	11579665	4358
ENSMUSG00000109378	protein_coding	Gm49396	ENSMUST00000171912	nonsense_mediated_decay	principal5	7	1	30563355	2721
ENSMUSG00000086514	antisense	Gm11747	ENSMUST00000142751	antisense		11	-1	118454995	1648
ENSMUSG00000109378	protein_coding	Gm49396	ENSMUST00000163994	retained_intron		7	1	30563359	382
ENSMUSG00000094081	protein_coding	Gm20826	ENSMUST00000185348	protein_coding	principal1	Y	-1	7638489	4605
ENSMUSG00000108048	TEC	Gm43990	ENSMUST00000203790	TEC		6	1	15836089	1691
ENSMUSG00000094081	protein_coding	Gm20826	ENSMUST00000179256	protein_coding	principal1	Y	-1	7636973	758
ENSMUSG00000017446	protein_coding	C1qtnf1	ENSMUST00000124861	protein_coding		11	1	118428203	684
ENSMUSG00000021177	protein_coding	Tdp1	ENSMUST00000153627	protein_coding	principal1	12	1	99884537	2036
ENSMUSG00000021177	protein_coding	Tdp1	ENSMUST00000221396	retained_intron		12	1	99884546	3142
ENSMUSG00000042203	protein_coding	Tbc1d22b	ENSMUST00000048677	protein_coding	principal1	17	1	29549785	3595
ENSMUSG00000021177	protein_coding	Tdp1	ENSMUST00000137653	protein_coding		12	1	99886484	399
ENSMUSG00000028080	protein_coding	Lrba	ENSMUST00000107635	protein_coding	principal3	3	1	86224680	9888
ENSMUSG00000011632	protein_coding	Pinlyp	ENSMUST00000011776	protein_coding	principal1	7	-1	24546118	843
ENSMUSG00000021177	protein_coding	Tdp1	ENSMUST00000126424	retained_intron		12	1	99911648	438
ENSMUSG00000028080	protein_coding	Lrba	ENSMUST00000212390	protein_coding		3	1	86225289	6372
ENSMUSG00000021177	protein_coding	Tdp1	ENSMUST00000128739	retained_intron		12	1	99914006	689
ENSMUSG00000021177	protein_coding	Tdp1	ENSMUST00000220685	processed_transcript		12	1	99915466	329
ENSMUSG00000028080	protein_coding	Lrba	ENSMUST00000195966	retained_intron		3	1	86350657	1338
ENSMUSG00000045672	protein_coding	Col27a1	ENSMUST00000036300	protein_coding	principal1	4	1	63215435	7612
ENSMUSG00000028080	protein_coding	Lrba	ENSMUST00000194674	retained_intron		3	1	86542033	3231
ENSMUSG00000021177	protein_coding	Tdp1	ENSMUST00000021594	protein_coding	principal1	12	1	99891173	2019
ENSMUSG00000028080	protein_coding	Lrba	ENSMUST00000195398	retained_intron		3	1	86546755	4283
ENSMUSG00000081157	processed_pseudogene	Gm13552	ENSMUST00000118837	processed_pseudogene		2	-1	59564684	417
ENSMUSG00000036826	protein_coding	Igflr1	ENSMUST00000043850	protein_coding	principal2	7	1	30565427	1186
ENSMUSG00000028080	protein_coding	Lrba	ENSMUST00000195524	protein_coding		3	1	86548216	3322
ENSMUSG00000094392	processed_pseudogene	Gm3788	ENSMUST00000119949	processed_pseudogene		3	-1	86672168	136
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000021937	protein_coding	principal2	13	1	55105327	3333
ENSMUSG00000038056	protein_coding	Kmt2c	ENSMUST00000045291	protein_coding	principal1	5	-1	25498745	14967
ENSMUSG00000036826	protein_coding	Igflr1	ENSMUST00000172251	protein_coding	alternative2	7	1	30566080	1224
ENSMUSG00000057777	protein_coding	Mab21l2	ENSMUST00000191695	processed_pseudogene		3	-1	86548629	2580
ENSMUSG00000057777	protein_coding	Mab21l2	ENSMUST00000077524	protein_coding	principal1	3	-1	86548283	2703
ENSMUSG00000024386	protein_coding	Proc	ENSMUST00000234651	protein_coding	principal1	18	-1	32138199	1575
ENSMUSG00000103759	processed_pseudogene	Gm37288	ENSMUST00000193963	processed_pseudogene		3	-1	86263575	334
ENSMUSG00000042203	protein_coding	Tbc1d22b	ENSMUST00000234778	nonsense_mediated_decay		17	1	29549791	3651
ENSMUSG00000067288	protein_coding	Rps28	ENSMUST00000173019	protein_coding	principal1	17	-1	33824492	437
ENSMUSG00000056185	protein_coding	Snx32	ENSMUST00000070172	protein_coding	principal1	19	-1	5510538	1703
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000159278	protein_coding	alternative2	13	1	55105332	1253
ENSMUSG00000042203	protein_coding	Tbc1d22b	ENSMUST00000160114	retained_intron		17	1	29572423	3315
ENSMUSG00000024386	protein_coding	Proc	ENSMUST00000234746	nonsense_mediated_decay		18	-1	32138026	719
ENSMUSG00000099329	processed_transcript	Gm28052	ENSMUST00000150388	processed_transcript		17	1	29549799	902
ENSMUSG00000056185	protein_coding	Snx32	ENSMUST00000237111	protein_coding		19	-1	5510463	1872
ENSMUSG00000041193	protein_coding	Pla2g5	ENSMUST00000102512	protein_coding	principal1	4	-1	138819255	1976
ENSMUSG00000056185	protein_coding	Snx32	ENSMUST00000236120	retained_intron		19	-1	5497365	1724
ENSMUSG00000117376	bidirectional_promoter_lncRNA	2010106G04Rik	ENSMUST00000234617	bidirectional_promoter_lncRNA		17	-1	29614770	311
ENSMUSG00000056185	protein_coding	Snx32	ENSMUST00000237249	retained_intron		19	-1	5498306	518
ENSMUSG00000056185	protein_coding	Snx32	ENSMUST00000238132	processed_transcript		19	-1	5510482	365
ENSMUSG00000041193	protein_coding	Pla2g5	ENSMUST00000102513	protein_coding	principal1	4	-1	138863482	2289
ENSMUSG00000017446	protein_coding	C1qtnf1	ENSMUST00000017590	protein_coding	principal1	11	1	118428499	2532
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000161551	nonsense_mediated_decay		13	1	55105333	543
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000226190	protein_coding	principal2	7	-1	10613659	2288
ENSMUSG00000036835	protein_coding	Psenen	ENSMUST00000207747	protein_coding	principal1	7	-1	30563087	669
ENSMUSG00000024386	protein_coding	Proc	ENSMUST00000234386	protein_coding		18	-1	32138182	781
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000159147	protein_coding		13	1	55105333	1146
ENSMUSG00000041193	protein_coding	Pla2g5	ENSMUST00000102511	protein_coding	principal1	4	-1	138812165	690
ENSMUSG00000100937	protein_coding	1700020D05Rik	ENSMUST00000189704	protein_coding	principal1	19	-1	5503787	1021
ENSMUSG00000046761	protein_coding	Fam83h	ENSMUST00000170153	protein_coding	principal2	15	-1	76009498	4534
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000226244	protein_coding		12	-1	55820767	8841
ENSMUSG00000017446	protein_coding	C1qtnf1	ENSMUST00000106286	protein_coding	principal1	11	1	118433853	2512
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000226228	protein_coding	principal2	7	-1	10613659	2507
ENSMUSG00000024386	protein_coding	Proc	ENSMUST00000234198	retained_intron		18	-1	32135746	733
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000228296	protein_coding	alternative2	7	-1	10613659	2061
ENSMUSG00000046761	protein_coding	Fam83h	ENSMUST00000238313	protein_coding	alternative2	15	-1	76013381	4994
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000228638	protein_coding	alternative2	7	-1	10613659	2280
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000226990	retained_intron		7	-1	10613659	2656
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000162476	nonsense_mediated_decay		13	1	55105333	1112
ENSMUSG00000017446	protein_coding	C1qtnf1	ENSMUST00000133558	protein_coding		11	1	118443471	246
ENSMUSG00000024386	protein_coding	Proc	ENSMUST00000234375	protein_coding		18	-1	32139570	614
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000176707	protein_coding	principal2	7	-1	10613659	3447
ENSMUSG00000101254	unprocessed_pseudogene	Gm20932	ENSMUST00000189115	unprocessed_pseudogene		Y	-1	69626517	694
ENSMUSG00000045672	protein_coding	Col27a1	ENSMUST00000184067	nonsense_mediated_decay		4	1	63234286	4281
ENSMUSG00000067288	protein_coding	Rps28	ENSMUST00000087342	protein_coding	principal1	17	-1	33824562	392
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000176284	protein_coding	principal2	7	-1	10613659	3228
ENSMUSG00000024386	protein_coding	Proc	ENSMUST00000234657	protein_coding		18	-1	32138171	558
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000160660	nonsense_mediated_decay		13	1	55105337	663
ENSMUSG00000046761	protein_coding	Fam83h	ENSMUST00000060807	protein_coding	principal2	15	-1	76014336	4502
ENSMUSG00000041193	protein_coding	Pla2g5	ENSMUST00000127183	processed_transcript		4	-1	138812211	374
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000226160	protein_coding	principal2	7	-1	10613659	2885
ENSMUSG00000024386	protein_coding	Proc	ENSMUST00000234649	retained_intron		18	-1	32138182	659
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000162428	nonsense_mediated_decay		13	1	55105339	845
ENSMUSG00000067288	protein_coding	Rps28	ENSMUST00000173879	protein_coding		17	-1	33824346	342
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000227853	protein_coding	alternative2	7	-1	10613659	1966
ENSMUSG00000041193	protein_coding	Pla2g5	ENSMUST00000136393	processed_transcript		4	-1	138819257	391
ENSMUSG00000091662	protein_coding	Vmn1r69	ENSMUST00000228478	protein_coding	alternative2	7	-1	10613659	2185
ENSMUSG00000112298	processed_pseudogene	Gm48088	ENSMUST00000220362	processed_pseudogene		12	1	11099596	482
ENSMUSG00000024386	protein_coding	Proc	ENSMUST00000171765	protein_coding	principal1	18	-1	32139570	1566
ENSMUSG00000111440	processed_pseudogene	Vmn1r-ps50	ENSMUST00000216908	processed_pseudogene		7	-1	10605196	453
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000161077	protein_coding		13	1	55105399	765
ENSMUSG00000041193	protein_coding	Pla2g5	ENSMUST00000140117	processed_transcript		4	-1	138819228	455
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000162288	retained_intron		13	1	55113091	345
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000160310	retained_intron		13	1	55122016	644
ENSMUSG00000041193	protein_coding	Pla2g5	ENSMUST00000154844	processed_transcript		4	-1	138809823	286
ENSMUSG00000021481	protein_coding	Zfp346	ENSMUST00000162653	retained_intron		13	1	55130224	728
ENSMUSG00000041193	protein_coding	Pla2g5	ENSMUST00000140100	processed_transcript		4	-1	138863449	363
ENSMUSG00000023089	protein_coding	Ndufa5	ENSMUST00000132588	retained_intron		6	-1	24522866	433
ENSMUSG00000114481	processed_pseudogene	Gm46415	ENSMUST00000224848	processed_pseudogene		13	-1	55128183	345
ENSMUSG00000067288	protein_coding	Rps28	ENSMUST00000173480	processed_transcript		17	-1	33824465	372
ENSMUSG00000067288	protein_coding	Rps28	ENSMUST00000173844	protein_coding	principal1	17	-1	33824562	382
ENSMUSG00000110051	lincRNA	Gm45322	ENSMUST00000211642	lincRNA		8	1	49838068	1361
ENSMUSG00000026434	protein_coding	Nucks1	ENSMUST00000189946	protein_coding	alternative2	1	1	131910534	2375
ENSMUSG00000109907	lincRNA	Gm45321	ENSMUST00000210742	lincRNA		8	1	49818937	458
ENSMUSG00000102018	protein_coding	Iqank1	ENSMUST00000185810	retained_intron		15	1	76009888	925
ENSMUSG00000109907	lincRNA	Gm45321	ENSMUST00000209758	lincRNA		8	1	49821436	1798
ENSMUSG00000067288	protein_coding	Rps28	ENSMUST00000166693	protein_coding	principal1	17	-1	33824476	271
ENSMUSG00000109907	lincRNA	Gm45321	ENSMUST00000209286	lincRNA		8	1	49896056	2863
ENSMUSG00000110375	lincRNA	Gm45323	ENSMUST00000209853	lincRNA		8	-1	50013384	413
ENSMUSG00000041193	protein_coding	Pla2g5	ENSMUST00000030524	protein_coding	principal1	4	-1	138863469	2131
ENSMUSG00000045672	protein_coding	Col27a1	ENSMUST00000183913	nonsense_mediated_decay		4	1	63282667	3215
ENSMUSG00000067288	protein_coding	Rps28	ENSMUST00000234017	retained_intron		17	-1	33824494	1443
ENSMUSG00000036835	protein_coding	Psenen	ENSMUST00000043898	protein_coding	principal1	7	-1	30563241	708
ENSMUSG00000110147	TEC	Gm45324	ENSMUST00000211193	TEC		8	1	49989907	5638
ENSMUSG00000067288	protein_coding	Rps28	ENSMUST00000174788	retained_intron		17	-1	33824484	812
ENSMUSG00000083179	processed_pseudogene	Gm12693	ENSMUST00000121965	processed_pseudogene		4	1	94935621	483
ENSMUSG00000025790	protein_coding	Slco3a1	ENSMUST00000098371	protein_coding	alternative1	7	-1	74554633	2709
ENSMUSG00000034412	protein_coding	Tbc1d10a	ENSMUST00000041042	protein_coding	alternative2	11	1	4186789	1957
ENSMUSG00000036835	protein_coding	Psenen	ENSMUST00000207972	processed_transcript		7	-1	30562759	414
ENSMUSG00000043673	protein_coding	Kcns3	ENSMUST00000055673	protein_coding	principal1	12	-1	11150373	2933
ENSMUSG00000110050	TEC	Gm45259	ENSMUST00000209217	TEC		8	1	50389092	1006
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000117253	protein_coding		5	1	81021202	4764
ENSMUSG00000109838	lincRNA	Gm45341	ENSMUST00000210850	lincRNA		8	-1	50517889	1104
ENSMUSG00000036835	protein_coding	Psenen	ENSMUST00000207031	protein_coding		7	-1	30562931	316
ENSMUSG00000026434	protein_coding	Nucks1	ENSMUST00000062264	protein_coding	principal3	1	1	131910556	5998
ENSMUSG00000034412	protein_coding	Tbc1d10a	ENSMUST00000147485	processed_transcript		11	1	4186789	1230
ENSMUSG00000102018	protein_coding	Iqank1	ENSMUST00000187868	protein_coding	principal1	15	1	76009890	1810
ENSMUSG00000043673	protein_coding	Kcns3	ENSMUST00000217974	protein_coding	principal1	12	-1	11151056	2314
ENSMUSG00000023089	protein_coding	Ndufa5	ENSMUST00000118558	protein_coding		6	-1	24527570	315
ENSMUSG00000036835	protein_coding	Psenen	ENSMUST00000208628	protein_coding		7	-1	30563627	488
ENSMUSG00000026434	protein_coding	Nucks1	ENSMUST00000187405	retained_intron		1	1	131929163	909
ENSMUSG00000034412	protein_coding	Tbc1d10a	ENSMUST00000149465	processed_transcript		11	1	4212475	701
ENSMUSG00000045672	protein_coding	Col27a1	ENSMUST00000149856	retained_intron		4	1	63283513	4279
ENSMUSG00000110281	lincRNA	Gm2516	ENSMUST00000210011	lincRNA		8	1	50368112	954
ENSMUSG00000036835	protein_coding	Psenen	ENSMUST00000209110	retained_intron		7	-1	30562761	514
ENSMUSG00000102018	protein_coding	Iqank1	ENSMUST00000185762	processed_transcript		15	1	76014590	527
ENSMUSG00000103569	TEC	Gm38067	ENSMUST00000192346	TEC		1	1	131914529	1911
ENSMUSG00000034412	protein_coding	Tbc1d10a	ENSMUST00000135089	processed_transcript		11	1	4212311	777
ENSMUSG00000025790	protein_coding	Slco3a1	ENSMUST00000026897	protein_coding	principal4	7	-1	74554614	4589
ENSMUSG00000102018	protein_coding	Iqank1	ENSMUST00000187976	protein_coding		15	1	76034252	578
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000220367	protein_coding	alternative1	12	-1	55820767	7473
ENSMUSG00000045672	protein_coding	Col27a1	ENSMUST00000151992	processed_transcript		4	1	63330993	1485
ENSMUSG00000036835	protein_coding	Psenen	ENSMUST00000207797	protein_coding		7	-1	30563124	227
ENSMUSG00000103975	TEC	Gm37676	ENSMUST00000195496	TEC		1	-1	131932970	507
ENSMUSG00000034412	protein_coding	Tbc1d10a	ENSMUST00000151672	processed_transcript		11	1	4205423	389
ENSMUSG00000043673	protein_coding	Kcns3	ENSMUST00000164495	protein_coding	principal1	12	-1	11150842	2332
ENSMUSG00000030209	protein_coding	Grin2b	ENSMUST00000053880	protein_coding	principal1	6	-1	136173125	24060
ENSMUSG00000042099	protein_coding	Kank3	ENSMUST00000234426	nonsense_mediated_decay		17	1	33810519	646
ENSMUSG00000025790	protein_coding	Slco3a1	ENSMUST00000107453	protein_coding		7	-1	74554780	3793
ENSMUSG00000028102	protein_coding	Pex11b	ENSMUST00000144962	processed_transcript		3	1	96635376	2235
ENSMUSG00000106248	processed_pseudogene	Gm9728	ENSMUST00000200197	processed_pseudogene		6	-1	67634143	1055
ENSMUSG00000023089	protein_coding	Ndufa5	ENSMUST00000023851	protein_coding	principal1	6	-1	24528013	875
ENSMUSG00000102018	protein_coding	Iqank1	ENSMUST00000230169	processed_transcript		15	1	76034699	761
ENSMUSG00000100976	unprocessed_pseudogene	Gm29134	ENSMUST00000186579	unprocessed_pseudogene		Y	1	69670176	126
ENSMUSG00000034412	protein_coding	Tbc1d10a	ENSMUST00000180088	protein_coding	principal2	11	1	4186822	1921
ENSMUSG00000025790	protein_coding	Slco3a1	ENSMUST00000142175	retained_intron		7	-1	74347231	628
ENSMUSG00000105464	processed_pseudogene	Rpl18a-ps2	ENSMUST00000197158	processed_pseudogene		6	-1	67641703	174
ENSMUSG00000102018	protein_coding	Iqank1	ENSMUST00000187060	retained_intron		15	1	76036646	1260
ENSMUSG00000109741	lincRNA	Gm45455	ENSMUST00000209514	lincRNA		8	-1	50517680	482
ENSMUSG00000058908	polymorphic_pseudogene	Pla2g2a	ENSMUST00000135748	polymorphic_pseudogene		4	1	138831860	788
ENSMUSG00000023089	protein_coding	Ndufa5	ENSMUST00000141274	processed_transcript		6	-1	24527526	453
ENSMUSG00000025790	protein_coding	Slco3a1	ENSMUST00000134539	protein_coding		7	-1	74554474	656
ENSMUSG00000100489	unprocessed_pseudogene	Gm28303	ENSMUST00000185642	unprocessed_pseudogene		Y	-1	69737006	747
ENSMUSG00000109741	lincRNA	Gm45455	ENSMUST00000211156	lincRNA		8	-1	50517642	630
ENSMUSG00000025790	protein_coding	Slco3a1	ENSMUST00000136389	retained_intron		7	-1	74504335	425
ENSMUSG00000073640	processed_pseudogene	Rpl27-ps3	ENSMUST00000097682	processed_pseudogene		18	1	6332632	411
ENSMUSG00000058908	polymorphic_pseudogene	Pla2g2a	ENSMUST00000134898	processed_transcript		4	1	138831876	462
ENSMUSG00000058908	polymorphic_pseudogene	Pla2g2a	ENSMUST00000147728	retained_intron		4	1	138833259	557
ENSMUSG00000117387	processed_pseudogene	Gm49986	ENSMUST00000234758	processed_pseudogene		18	1	6368360	438
ENSMUSG00000054757	protein_coding	Akr1c20	ENSMUST00000080361	protein_coding	principal1	13	-1	4523345	1337
ENSMUSG00000025790	protein_coding	Slco3a1	ENSMUST00000138099	protein_coding		7	-1	74552594	887
ENSMUSG00000095614	processed_pseudogene	Gm6291	ENSMUST00000179994	processed_pseudogene		18	-1	6371660	309
ENSMUSG00000025790	protein_coding	Slco3a1	ENSMUST00000129292	processed_transcript		7	-1	74530109	442
ENSMUSG00000030209	protein_coding	Grin2b	ENSMUST00000152012	protein_coding		6	-1	136173511	2461
ENSMUSG00000000301	protein_coding	Pemt	ENSMUST00000150954	processed_transcript		11	-1	59971510	424
ENSMUSG00000026254	protein_coding	Eif4e2	ENSMUST00000113232	protein_coding		1	1	87213914	1125
ENSMUSG00000030209	protein_coding	Grin2b	ENSMUST00000188999	protein_coding		6	-1	136171889	601
ENSMUSG00000085161	antisense	Gm7580	ENSMUST00000132826	antisense		7	1	74392698	497
ENSMUSG00000048334	processed_pseudogene	Gm8258	ENSMUST00000055593	processed_pseudogene		5	1	104775779	1449
ENSMUSG00000030209	protein_coding	Grin2b	ENSMUST00000143943	protein_coding		6	-1	136173511	703
ENSMUSG00000054757	protein_coding	Akr1c20	ENSMUST00000221564	protein_coding		13	-1	4523313	832
ENSMUSG00000030209	protein_coding	Grin2b	ENSMUST00000125905	protein_coding		6	-1	136173511	630
ENSMUSG00000030209	protein_coding	Grin2b	ENSMUST00000198283	processed_transcript		6	-1	136173377	241
ENSMUSG00000038056	protein_coding	Kmt2c	ENSMUST00000172707	retained_intron		5	-1	25281400	612
ENSMUSG00000058908	polymorphic_pseudogene	Pla2g2a	ENSMUST00000077582	protein_coding	principal1	4	1	138831857	784
ENSMUSG00000030209	protein_coding	Grin2b	ENSMUST00000111905	protein_coding	principal1	6	-1	136173511	7484
ENSMUSG00000038056	protein_coding	Kmt2c	ENSMUST00000173673	retained_intron		5	-1	25293379	857
ENSMUSG00000038056	protein_coding	Kmt2c	ENSMUST00000173073	protein_coding		5	-1	25498702	5301
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000085385	protein_coding	principal2	12	-1	55821167	7901
ENSMUSG00000054757	protein_coding	Akr1c20	ENSMUST00000078239	protein_coding		13	-1	4523344	1319
ENSMUSG00000100467	protein_coding	Gm29582	ENSMUST00000185667	protein_coding	principal1	Y	-1	30738561	931
ENSMUSG00000109011	processed_pseudogene	Gm44857	ENSMUST00000208331	processed_pseudogene		7	1	106685003	196
ENSMUSG00000064223	protein_coding	Olfr694	ENSMUST00000216895	protein_coding	principal1	7	-1	106691124	4853
ENSMUSG00000108201	processed_pseudogene	Gm43991	ENSMUST00000203751	processed_pseudogene		6	-1	16089959	274
ENSMUSG00000038056	protein_coding	Kmt2c	ENSMUST00000173174	protein_coding		5	-1	25498755	2646
ENSMUSG00000097187	protein_coding	Gm19426	ENSMUST00000181711	protein_coding	principal1	2	-1	84743655	726
ENSMUSG00000064223	protein_coding	Olfr694	ENSMUST00000216118	protein_coding	principal1	7	-1	106691814	5035
ENSMUSG00000107885	processed_pseudogene	Gm43993	ENSMUST00000203972	processed_pseudogene		6	-1	16233490	247
ENSMUSG00000038056	protein_coding	Kmt2c	ENSMUST00000172626	retained_intron		5	-1	25498783	4542
ENSMUSG00000064223	protein_coding	Olfr694	ENSMUST00000052535	protein_coding	principal1	7	-1	106691307	1123
ENSMUSG00000064223	protein_coding	Olfr694	ENSMUST00000082091	protein_coding	principal1	7	-1	106689729	948
ENSMUSG00000116838	processed_pseudogene	Gm6475	ENSMUST00000231500	processed_pseudogene		17	-1	3314185	1936
ENSMUSG00000024770	protein_coding	Lipn	ENSMUST00000025682	protein_coding	principal1	19	1	34067358	1502
ENSMUSG00000007812	protein_coding	Zfp655	ENSMUST00000200039	protein_coding	alternative1	5	1	145231715	1765
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000120128	protein_coding		5	1	81021240	6370
ENSMUSG00000024770	protein_coding	Lipn	ENSMUST00000126710	protein_coding		19	1	34067378	632
ENSMUSG00000041141	protein_coding	Pnmal1	ENSMUST00000038163	protein_coding	principal1	7	1	16959679	4090
ENSMUSG00000024770	protein_coding	Lipn	ENSMUST00000148821	nonsense_mediated_decay		19	1	34067529	1138
ENSMUSG00000028102	protein_coding	Pex11b	ENSMUST00000118557	protein_coding	principal1	3	1	96635430	2424
ENSMUSG00000053550	protein_coding	Shisa7	ENSMUST00000117452	protein_coding		7	-1	4836174	5211
ENSMUSG00000032667	protein_coding	Pon2	ENSMUST00000057792	protein_coding	principal1	6	-1	5298455	2409
ENSMUSG00000007812	protein_coding	Zfp655	ENSMUST00000167316	protein_coding	principal3	5	1	145231723	4104
ENSMUSG00000028102	protein_coding	Pex11b	ENSMUST00000156015	nonsense_mediated_decay		3	1	96635500	1017
ENSMUSG00000059395	protein_coding	Nkapl	ENSMUST00000068235	protein_coding	principal1	13	-1	21468509	1463
ENSMUSG00000028102	protein_coding	Pex11b	ENSMUST00000139523	retained_intron		3	1	96635653	367
ENSMUSG00000007812	protein_coding	Zfp655	ENSMUST00000196069	protein_coding		5	1	145231729	1150
ENSMUSG00000032667	protein_coding	Pon2	ENSMUST00000123838	retained_intron		6	-1	5298330	2691
ENSMUSG00000007812	protein_coding	Zfp655	ENSMUST00000199322	protein_coding		5	1	145231755	4157
ENSMUSG00000032667	protein_coding	Pon2	ENSMUST00000135342	processed_transcript		6	-1	5289068	242
ENSMUSG00000032667	protein_coding	Pon2	ENSMUST00000203882	retained_intron		6	-1	5280334	2834
ENSMUSG00000053550	protein_coding	Shisa7	ENSMUST00000119433	protein_coding	principal2	7	-1	4844696	3481
ENSMUSG00000007812	protein_coding	Zfp655	ENSMUST00000199003	protein_coding		5	1	145231756	601
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000121707	protein_coding		5	1	81021593	6690
ENSMUSG00000107668	TEC	Gm44424	ENSMUST00000203438	TEC		6	1	5279655	1826
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000132634	processed_transcript		5	1	81021791	445
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000153264	processed_transcript		5	1	81021792	3279
ENSMUSG00000028102	protein_coding	Pex11b	ENSMUST00000048766	protein_coding	principal1	3	1	96635672	1122
ENSMUSG00000007812	protein_coding	Zfp655	ENSMUST00000085661	protein_coding		5	1	145231757	597
ENSMUSG00000053550	protein_coding	Shisa7	ENSMUST00000157068	retained_intron		7	-1	4831127	468
ENSMUSG00000020553	protein_coding	Pctp	ENSMUST00000020864	protein_coding	principal1	11	-1	90002894	2723
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000127046	retained_intron		5	1	81021810	1680
ENSMUSG00000053550	protein_coding	Shisa7	ENSMUST00000132806	retained_intron		7	-1	4834515	619
ENSMUSG00000053550	protein_coding	Shisa7	ENSMUST00000066041	protein_coding	alternative2	7	-1	4844696	6006
ENSMUSG00000043207	protein_coding	Zmpste24	ENSMUST00000058754	protein_coding	principal1	4	-1	121098241	3429
ENSMUSG00000108089	processed_pseudogene	Gm3148	ENSMUST00000203594	processed_pseudogene		6	1	16237627	612
ENSMUSG00000078117	TEC	Gm16485	ENSMUST00000104915	TEC		9	1	8971791	3983
ENSMUSG00000043207	protein_coding	Zmpste24	ENSMUST00000143768	processed_transcript		4	-1	121077738	3949
ENSMUSG00000028102	protein_coding	Pex11b	ENSMUST00000165842	protein_coding		3	1	96635833	1562
ENSMUSG00000095192	lincRNA	Gm21529	ENSMUST00000188473	lincRNA		Y	-1	30840284	174
ENSMUSG00000038175	protein_coding	Mylip	ENSMUST00000038275	protein_coding	principal1	13	1	45389742	3065
ENSMUSG00000095192	lincRNA	Gm21529	ENSMUST00000180175	lincRNA		Y	-1	30840278	498
ENSMUSG00000043207	protein_coding	Zmpste24	ENSMUST00000135788	protein_coding		4	-1	121095698	439
ENSMUSG00000028102	protein_coding	Pex11b	ENSMUST00000147821	retained_intron		3	1	96637053	506
ENSMUSG00000038175	protein_coding	Mylip	ENSMUST00000222178	protein_coding		13	1	45390927	1954
ENSMUSG00000108295	processed_transcript	Gm36406	ENSMUST00000203761	lincRNA		6	-1	16469950	551
ENSMUSG00000108948	protein_coding	Olfr695	ENSMUST00000216868	protein_coding	principal1	7	-1	106716396	3953
ENSMUSG00000108295	processed_transcript	Gm36406	ENSMUST00000203052	retained_intron		6	-1	16469904	608
ENSMUSG00000072709	protein_coding	Olfr380	ENSMUST00000121209	protein_coding	principal1	11	-1	73457458	1669
ENSMUSG00000072709	protein_coding	Olfr380	ENSMUST00000127789	protein_coding	principal1	11	-1	73457508	1536
ENSMUSG00000108025	lincRNA	Gm36503	ENSMUST00000204284	lincRNA		6	1	16550387	875
ENSMUSG00000105262	processed_pseudogene	Gm19175	ENSMUST00000199895	processed_pseudogene		3	1	17923708	916
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000118078	protein_coding		5	1	81309873	4871
ENSMUSG00000072709	protein_coding	Olfr380	ENSMUST00000075532	protein_coding	principal1	11	-1	73454210	936
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000120144	protein_coding		5	1	81309874	4999
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000120445	protein_coding		5	1	81309874	5230
ENSMUSG00000109365	unprocessed_pseudogene	Olfr696-ps1	ENSMUST00000207160	unprocessed_pseudogene		7	-1	106729819	948
ENSMUSG00000034098	protein_coding	Fstl5	ENSMUST00000038364	protein_coding	principal1	3	1	76074270	5107
ENSMUSG00000106447	protein_coding	Gm42957	ENSMUST00000137564	nonsense_mediated_decay	principal1	3	1	96635474	3624
ENSMUSG00000100311	lincRNA	Gm29581	ENSMUST00000186083	lincRNA		Y	-1	30883666	622
ENSMUSG00000072774	protein_coding	Zfp951	ENSMUST00000186219	protein_coding	principal2	5	-1	104860070	2904
ENSMUSG00000100311	lincRNA	Gm29581	ENSMUST00000187784	lincRNA		Y	-1	30883666	437
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000017354	protein_coding	principal2	11	-1	98729435	3410
ENSMUSG00000029784	protein_coding	Ssmem1	ENSMUST00000031797	protein_coding		6	1	30509849	1340
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000120673	protein_coding	alternative1	5	1	81309874	5178
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000118034	protein_coding		5	1	81309874	4947
ENSMUSG00000034098	protein_coding	Fstl5	ENSMUST00000159686	processed_transcript		3	1	76074559	2304
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000118442	protein_coding		5	1	81309874	5101
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000121641	protein_coding		5	1	81309874	5151
ENSMUSG00000107022	lincRNA	Gm36669	ENSMUST00000201757	lincRNA		6	1	16777524	3650
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000156378	retained_intron		11	-1	98706480	760
ENSMUSG00000020383	protein_coding	Il13	ENSMUST00000020650	protein_coding	principal1	11	-1	53634702	1205
ENSMUSG00000072774	protein_coding	Zfp951	ENSMUST00000191135	processed_transcript		5	-1	104859793	1923
ENSMUSG00000034098	protein_coding	Fstl5	ENSMUST00000160261	protein_coding	principal1	3	1	76075583	3173
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000117985	protein_coding		5	1	81309874	4974
ENSMUSG00000072774	protein_coding	Zfp951	ENSMUST00000089906	protein_coding	alternative2	5	-1	104828957	1356
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000120292	protein_coding		5	1	81309874	5026
ENSMUSG00000034098	protein_coding	Fstl5	ENSMUST00000191664	retained_intron		3	1	76586880	3308
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000134597	processed_transcript		5	1	81309882	867
ENSMUSG00000094232	lincRNA	Gm21539	ENSMUST00000188764	lincRNA		Y	-1	30906514	174
ENSMUSG00000034098	protein_coding	Fstl5	ENSMUST00000162471	protein_coding		3	1	76593550	605
ENSMUSG00000094232	lincRNA	Gm21539	ENSMUST00000177925	lincRNA		Y	-1	30906508	498
ENSMUSG00000103920	TEC	Gm37897	ENSMUST00000192613	TEC		3	1	76546691	3561
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000119385	protein_coding		5	1	81309912	4905
ENSMUSG00000084046	processed_pseudogene	Gm11833	ENSMUST00000118393	processed_pseudogene		4	-1	11650499	853
ENSMUSG00000042099	protein_coding	Kank3	ENSMUST00000048560	protein_coding	principal1	17	1	33810520	2641
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000138750	nonsense_mediated_decay		11	-1	98729367	3165
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000122356	protein_coding		5	1	81309912	4853
ENSMUSG00000026664	protein_coding	Phyh	ENSMUST00000027975	protein_coding	principal1	2	1	4919019	1438
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000122037	protein_coding		5	1	81309912	4649
ENSMUSG00000029784	protein_coding	Ssmem1	ENSMUST00000031798	protein_coding	principal1	6	1	30512286	1155
ENSMUSG00000099990	lincRNA	Gm29578	ENSMUST00000188809	lincRNA		Y	-1	30946078	537
ENSMUSG00000099990	lincRNA	Gm29578	ENSMUST00000190180	lincRNA		Y	-1	30946078	352
ENSMUSG00000026664	protein_coding	Phyh	ENSMUST00000146933	processed_transcript		2	1	4919080	748
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000117407	protein_coding		5	1	81309912	5705
ENSMUSG00000029784	protein_coding	Ssmem1	ENSMUST00000131485	protein_coding		6	1	30513698	397
ENSMUSG00000037949	protein_coding	Ano10	ENSMUST00000042546	protein_coding	principal1	9	-1	122294423	2653
ENSMUSG00000026664	protein_coding	Phyh	ENSMUST00000128738	processed_transcript		2	1	4937483	365
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000119788	protein_coding		5	1	81309937	5394
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000100500	protein_coding	alternative2	11	-1	98729410	3133
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000126227	processed_transcript		5	1	81645989	675
ENSMUSG00000042099	protein_coding	Kank3	ENSMUST00000172649	protein_coding		17	1	33810523	2652
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000124371	retained_intron		11	-1	98707251	478
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000200930	retained_intron		5	1	81659944	1356
ENSMUSG00000118245	bidirectional_promoter_lncRNA	Gm30082	ENSMUST00000236928	bidirectional_promoter_lncRNA		19	1	4201779	835
ENSMUSG00000101181	unprocessed_pseudogene	Vmn2r-ps149	ENSMUST00000188423	unprocessed_pseudogene		Y	1	7665545	777
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000139849	processed_transcript		11	-1	98708003	370
ENSMUSG00000042099	protein_coding	Kank3	ENSMUST00000173789	protein_coding		17	1	33810523	783
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000163047	protein_coding		6	1	38551334	3141
ENSMUSG00000108348	protein_coding	Gm42372	ENSMUST00000206129	protein_coding	principal1	7	1	16983086	5067
ENSMUSG00000037949	protein_coding	Ano10	ENSMUST00000214409	protein_coding		9	-1	122294346	2384
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000124117	protein_coding		5	1	81660303	4191
ENSMUSG00000101527	unprocessed_pseudogene	Gm21908	ENSMUST00000191224	unprocessed_pseudogene		Y	-1	31232677	696
ENSMUSG00000042099	protein_coding	Kank3	ENSMUST00000173958	retained_intron		17	1	33810529	487
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000201055	retained_intron		5	1	81723978	2082
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000148830	processed_transcript		5	1	81771658	241
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000137328	retained_intron		11	-1	98729418	2830
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000201803	retained_intron		5	1	81791561	2035
ENSMUSG00000042099	protein_coding	Kank3	ENSMUST00000234357	processed_transcript		17	1	33817907	1640
ENSMUSG00000037949	protein_coding	Ano10	ENSMUST00000216738	protein_coding		9	-1	122187619	680
ENSMUSG00000026254	protein_coding	Eif4e2	ENSMUST00000113233	protein_coding	principal1	1	1	87213914	1807
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000144720	retained_intron		11	-1	98711066	685
ENSMUSG00000000301	protein_coding	Pemt	ENSMUST00000102692	protein_coding	principal1	11	-1	60037005	1003
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000072521	protein_coding	principal2	5	1	81310025	6203
ENSMUSG00000042099	protein_coding	Kank3	ENSMUST00000234152	retained_intron		17	1	33819649	535
ENSMUSG00000096698	lincRNA	Gm21780	ENSMUST00000187110	lincRNA		Y	1	31267477	174
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000141566	processed_transcript		11	-1	98718810	453
ENSMUSG00000096698	lincRNA	Gm21780	ENSMUST00000180128	lincRNA		Y	1	31267483	498
ENSMUSG00000026254	protein_coding	Eif4e2	ENSMUST00000050876	protein_coding		1	1	87213914	2869
ENSMUSG00000042099	protein_coding	Kank3	ENSMUST00000173649	retained_intron		17	1	33821830	355
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000126565	protein_coding		11	-1	98729374	416
ENSMUSG00000000301	protein_coding	Pemt	ENSMUST00000000310	protein_coding	principal1	11	-1	60046477	953
ENSMUSG00000000301	protein_coding	Pemt	ENSMUST00000102693	protein_coding		11	-1	60046481	961
ENSMUSG00000042099	protein_coding	Kank3	ENSMUST00000234655	retained_intron		17	1	33822020	594
ENSMUSG00000037605	protein_coding	Adgrl3	ENSMUST00000036068	protein_coding	alternative1	5	1	81310025	6203
ENSMUSG00000017210	protein_coding	Med24	ENSMUST00000144048	retained_intron		11	-1	98729403	537
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000219451	nonsense_mediated_decay		12	-1	55642448	663
ENSMUSG00000038611	protein_coding	Phrf1	ENSMUST00000155123	nonsense_mediated_decay		7	1	141228784	5271
ENSMUSG00000042099	protein_coding	Kank3	ENSMUST00000174608	protein_coding		17	1	33822143	696
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000219516	retained_intron		12	-1	55612637	791
ENSMUSG00000097984	processed_pseudogene	Gm8167	ENSMUST00000183320	processed_pseudogene		8	1	82577767	958
ENSMUSG00000000301	protein_coding	Pemt	ENSMUST00000136660	processed_transcript		11	-1	60036906	748
ENSMUSG00000026254	protein_coding	Eif4e2	ENSMUST00000076362	protein_coding		1	1	87213914	3394
ENSMUSG00000000301	protein_coding	Pemt	ENSMUST00000147422	protein_coding		11	-1	60040169	396
ENSMUSG00000101610	processed_pseudogene	Gm7560	ENSMUST00000187748	processed_pseudogene		1	1	12120960	873
ENSMUSG00000000301	protein_coding	Pemt	ENSMUST00000148512	protein_coding		11	-1	60046489	438
ENSMUSG00000000301	protein_coding	Pemt	ENSMUST00000143646	processed_transcript		11	-1	60021226	358
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000219432	protein_coding	alternative2	12	-1	55821097	6631
ENSMUSG00000095318	protein_coding	Gm8024	ENSMUST00000167099	protein_coding	principal1	14	-1	42524282	1408
ENSMUSG00000000301	protein_coding	Pemt	ENSMUST00000146461	processed_transcript		11	-1	59983740	404
ENSMUSG00000037949	protein_coding	Ano10	ENSMUST00000216081	nonsense_mediated_decay		9	-1	122294408	2329
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000219323	protein_coding		12	-1	55640713	495
ENSMUSG00000000301	protein_coding	Pemt	ENSMUST00000133028	processed_transcript		11	-1	60046485	328
ENSMUSG00000037949	protein_coding	Ano10	ENSMUST00000214507	protein_coding		9	-1	122263685	1770
ENSMUSG00000026254	protein_coding	Eif4e2	ENSMUST00000113235	protein_coding		1	1	87213914	3473
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000220017	retained_intron		12	-1	55693783	3914
ENSMUSG00000037949	protein_coding	Ano10	ENSMUST00000214283	nonsense_mediated_decay		9	-1	122294386	2342
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000219566	nonsense_mediated_decay		12	-1	55697899	760
ENSMUSG00000026254	protein_coding	Eif4e2	ENSMUST00000113230	protein_coding		1	1	87213939	1569
ENSMUSG00000026254	protein_coding	Eif4e2	ENSMUST00000123735	protein_coding		1	1	87213979	570
ENSMUSG00000037949	protein_coding	Ano10	ENSMUST00000216670	protein_coding		9	-1	122294374	2108
ENSMUSG00000005892	protein_coding	Trh	ENSMUST00000006046	protein_coding	principal1	6	-1	92244650	1384
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000219529	retained_intron		12	-1	55821081	3581
ENSMUSG00000037949	protein_coding	Ano10	ENSMUST00000217606	processed_transcript		9	-1	122294374	2280
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000219542	retained_intron		12	-1	55821167	3426
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000046875	protein_coding	principal1	1	-1	36244305	9033
ENSMUSG00000028214	protein_coding	Gem	ENSMUST00000108304	protein_coding	principal1	4	1	11704457	2006
ENSMUSG00000097628	processed_pseudogene	Gm2383	ENSMUST00000181461	processed_pseudogene		1	1	12565577	807
ENSMUSG00000108140	processed_pseudogene	Gm44803	ENSMUST00000204384	processed_pseudogene		6	-1	92271572	156
ENSMUSG00000021027	protein_coding	Ralgapa1	ENSMUST00000110687	protein_coding	principal2	12	-1	55821167	7874
ENSMUSG00000026254	protein_coding	Eif4e2	ENSMUST00000113231	protein_coding		1	1	87214286	1119
ENSMUSG00000028214	protein_coding	Gem	ENSMUST00000029868	protein_coding	principal1	4	1	11705807	1994
ENSMUSG00000109893	processed_pseudogene	Gm9655	ENSMUST00000211321	processed_pseudogene		8	1	82747616	1284
ENSMUSG00000097572	lincRNA	Gm26797	ENSMUST00000216452	lincRNA		9	-1	122308762	706
ENSMUSG00000108279	processed_pseudogene	Gm44024	ENSMUST00000203008	processed_pseudogene		6	-1	92281393	476
ENSMUSG00000116549	processed_pseudogene	Gm49728	ENSMUST00000231601	processed_pseudogene		16	-1	35832261	232
ENSMUSG00000097572	lincRNA	Gm26797	ENSMUST00000213132	lincRNA		9	-1	122310695	2562
ENSMUSG00000083239	unprocessed_pseudogene	Mup-ps1	ENSMUST00000120720	unprocessed_pseudogene		4	1	60085840	544
ENSMUSG00000114238	processed_pseudogene	Rps17-ps1	ENSMUST00000224932	processed_pseudogene		13	-1	41235077	384
ENSMUSG00000097572	lincRNA	Gm26797	ENSMUST00000180685	lincRNA		9	-1	122310928	3589
ENSMUSG00000099855	lincRNA	Gm28486	ENSMUST00000190984	lincRNA		Y	1	31290381	437
ENSMUSG00000099855	lincRNA	Gm28486	ENSMUST00000188443	lincRNA		Y	1	31290381	621
ENSMUSG00000094892	protein_coding	Vmn2r101	ENSMUST00000232916	retained_intron		17	1	19577227	6509
ENSMUSG00000114247	lincRNA	Gm32063	ENSMUST00000224417	lincRNA		13	1	41236345	1620
ENSMUSG00000111268	bidirectional_promoter_lncRNA	Gm47126	ENSMUST00000214412	bidirectional_promoter_lncRNA		9	1	122295911	269
ENSMUSG00000047187	protein_coding	Rab2a	ENSMUST00000060232	protein_coding	principal1	4	1	8535644	2133
ENSMUSG00000001998	protein_coding	Ap4e1	ENSMUST00000149254	retained_intron		2	1	127008717	3033
ENSMUSG00000067038	processed_pseudogene	Rps12-ps3	ENSMUST00000086764	processed_pseudogene		19	1	59322371	396
ENSMUSG00000001998	protein_coding	Ap4e1	ENSMUST00000129859	retained_intron		2	1	127008721	1962
ENSMUSG00000090210	protein_coding	Itga10	ENSMUST00000119365	protein_coding	principal2	3	1	96645584	5035
ENSMUSG00000021081	protein_coding	Serpina1f	ENSMUST00000117053	protein_coding		12	-1	103694666	2830
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000162415	protein_coding		7	-1	111083030	7995
ENSMUSG00000094892	protein_coding	Vmn2r101	ENSMUST00000171914	protein_coding	principal1	17	1	19577227	2578
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000161538	protein_coding		6	1	38551465	4253
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000161051	protein_coding		7	-1	111083017	3548
ENSMUSG00000090210	protein_coding	Itga10	ENSMUST00000127607	retained_intron		3	1	96657438	902
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000161079	processed_transcript		7	-1	111073151	429
ENSMUSG00000022664	protein_coding	Slc35a5	ENSMUST00000023344	protein_coding	principal1	16	-1	45158706	4233
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000161158	retained_intron		7	-1	111074261	599
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000173999	retained_intron		1	-1	36165811	3536
ENSMUSG00000090210	protein_coding	Itga10	ENSMUST00000029744	protein_coding	alternative2	3	1	96645584	5044
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000163014	protein_coding		7	-1	111074249	763
ENSMUSG00000022664	protein_coding	Slc35a5	ENSMUST00000181177	protein_coding		16	-1	45158566	865
ENSMUSG00000093598	antisense	A730085K08Rik	ENSMUST00000177015	antisense		9	-1	122398801	2013
ENSMUSG00000074746	protein_coding	Pdzd8	ENSMUST00000099274	protein_coding	principal1	19	-1	59345780	5982
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000159465	retained_intron		7	-1	111074699	472
ENSMUSG00000009145	protein_coding	Dqx1	ENSMUST00000077502	protein_coding	principal1	6	1	83057844	3257
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000160552	retained_intron		7	-1	111075385	418
ENSMUSG00000022664	protein_coding	Slc35a5	ENSMUST00000152364	retained_intron		16	-1	45151921	912
ENSMUSG00000118276	processed_pseudogene	Gm50440	ENSMUST00000237200	processed_pseudogene		19	1	59337576	394
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000161790	processed_transcript		7	-1	111076209	522
ENSMUSG00000009145	protein_coding	Dqx1	ENSMUST00000204803	non_stop_decay		6	1	83058097	1032
ENSMUSG00000022664	protein_coding	Slc35a5	ENSMUST00000180636	protein_coding		16	-1	45158644	1014
ENSMUSG00000098163	processed_pseudogene	Gm6216	ENSMUST00000182390	processed_pseudogene		1	1	12655867	687
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000161736	retained_intron		7	-1	111077751	771
ENSMUSG00000022664	protein_coding	Slc35a5	ENSMUST00000114600	protein_coding		16	-1	45158183	679
ENSMUSG00000110246	lincRNA	C130073E24Rik	ENSMUST00000210222	lincRNA		8	-1	50916997	6144
ENSMUSG00000110246	lincRNA	C130073E24Rik	ENSMUST00000211313	lincRNA		8	-1	50916997	14112
ENSMUSG00000097171	lincRNA	Gm17644	ENSMUST00000181272	lincRNA		1	1	12667563	3200
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000161682	retained_intron		7	-1	111079364	498
ENSMUSG00000022664	protein_coding	Slc35a5	ENSMUST00000181437	retained_intron		16	-1	45158655	574
ENSMUSG00000021081	protein_coding	Serpina1f	ENSMUST00000021490	protein_coding	principal1	12	-1	103695529	1569
ENSMUSG00000101314	lincRNA	Gm29663	ENSMUST00000186962	lincRNA		1	-1	12671176	853
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000160132	protein_coding	principal1	7	-1	111083019	742
ENSMUSG00000022664	protein_coding	Slc35a5	ENSMUST00000181750	protein_coding		16	-1	45158453	289
ENSMUSG00000110210	lincRNA	Gm33756	ENSMUST00000211358	lincRNA		19	1	59389784	636
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000116403	protein_coding	alternative1	13	-1	58403343	2970
ENSMUSG00000022664	protein_coding	Slc35a5	ENSMUST00000181377	retained_intron		16	-1	45158600	3927
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000159305	protein_coding		7	-1	111082195	560
ENSMUSG00000021081	protein_coding	Serpina1f	ENSMUST00000118101	protein_coding	principal1	12	-1	103694716	1453
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000073792	protein_coding	alternative2	10	-1	123076505	9301
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000162394	retained_intron		7	-1	111082827	716
ENSMUSG00000028444	protein_coding	Cntfr	ENSMUST00000102961	protein_coding	principal1	4	-1	41695442	1995
ENSMUSG00000108742	unprocessed_pseudogene	Gm44923	ENSMUST00000206673	unprocessed_pseudogene		11	-1	73483858	85
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000024816	protein_coding	principal1	17	1	29660595	6380
ENSMUSG00000005610	protein_coding	Eif4g2	ENSMUST00000160966	protein_coding		7	-1	111081853	395
ENSMUSG00000087055	sense_intronic	Gm11948	ENSMUST00000142322	sense_intronic		11	-1	3354911	539
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000224182	protein_coding	alternative1	13	-1	58402516	2754
ENSMUSG00000104286	TEC	Gm37457	ENSMUST00000193639	TEC		9	-1	91327848	2433
ENSMUSG00000052605	protein_coding	Isoc2b	ENSMUST00000064547	protein_coding	principal1	7	-1	4866193	1080
ENSMUSG00000087036	processed_transcript	Gm11748	ENSMUST00000153825	processed_transcript		11	-1	118479458	1498
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000235031	protein_coding		17	1	29660614	1271
ENSMUSG00000028444	protein_coding	Cntfr	ENSMUST00000102962	protein_coding	principal1	4	-1	41697040	1926
ENSMUSG00000102568	TEC	Gm37040	ENSMUST00000191740	TEC		9	-1	91337067	1824
ENSMUSG00000091970	processed_pseudogene	Gm4868	ENSMUST00000164138	processed_pseudogene		5	-1	125848740	789
ENSMUSG00000039376	protein_coding	Synpo2l	ENSMUST00000057090	protein_coding		14	-1	20668306	4394
ENSMUSG00000072708	protein_coding	Olfr381	ENSMUST00000214623	protein_coding	principal1	11	-1	73491603	2656
ENSMUSG00000028444	protein_coding	Cntfr	ENSMUST00000151181	processed_transcript		4	-1	41664034	596
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000234911	protein_coding		17	1	29660621	2815
ENSMUSG00000072708	protein_coding	Olfr381	ENSMUST00000215358	protein_coding	principal1	11	-1	73491478	2658
ENSMUSG00000086767	antisense	Gm13070	ENSMUST00000146532	antisense		4	1	149904006	768
ENSMUSG00000113084	protein_coding	A030003K21Rik	ENSMUST00000222600	protein_coding	principal1	1	-1	82943388	830
ENSMUSG00000052605	protein_coding	Isoc2b	ENSMUST00000207699	retained_intron		7	-1	4850868	636
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000235014	protein_coding		17	1	29660721	771
ENSMUSG00000052605	protein_coding	Isoc2b	ENSMUST00000208816	protein_coding	principal1	7	-1	4870258	820
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000057692	protein_coding	principal1	6	1	38551465	2702
ENSMUSG00000101608	lincRNA	Gm28652	ENSMUST00000187008	lincRNA		9	1	91337601	599
ENSMUSG00000039376	protein_coding	Synpo2l	ENSMUST00000119483	protein_coding		14	-1	20664574	3696
ENSMUSG00000072708	protein_coding	Olfr381	ENSMUST00000119863	protein_coding	principal1	11	-1	73491477	1065
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000130423	protein_coding		17	1	29660807	655
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000234388	protein_coding		17	1	29676229	440
ENSMUSG00000072708	protein_coding	Olfr381	ENSMUST00000078358	protein_coding	principal1	11	-1	73486822	936
ENSMUSG00000052605	protein_coding	Isoc2b	ENSMUST00000207502	retained_intron		7	-1	4851229	510
ENSMUSG00000031711	protein_coding	Zfp330	ENSMUST00000211451	retained_intron		8	-1	82769973	3585
ENSMUSG00000102406	TEC	A730094K22Rik	ENSMUST00000193867	TEC		9	-1	91350953	740
ENSMUSG00000105274	lincRNA	1700048F04Rik	ENSMUST00000199057	lincRNA		5	1	125928770	1064
ENSMUSG00000052605	protein_coding	Isoc2b	ENSMUST00000208173	retained_intron		7	-1	4866168	308
ENSMUSG00000039376	protein_coding	Synpo2l	ENSMUST00000117386	protein_coding	principal1	14	-1	20668354	3979
ENSMUSG00000113925	protein_coding	Gm7544	ENSMUST00000222426	protein_coding	principal1	1	-1	82956013	828
ENSMUSG00000114011	protein_coding	Gm47955	ENSMUST00000223536	protein_coding	principal1	1	1	82960286	639
ENSMUSG00000048520	protein_coding	Fbxl13	ENSMUST00000051358	protein_coding	principal1	5	-1	21645605	2531
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000177497	protein_coding		13	-1	58398055	2585
ENSMUSG00000078577	protein_coding	Tmco2	ENSMUST00000106268	protein_coding	principal1	4	-1	121109226	719
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000222536	retained_intron		10	-1	123030319	3978
ENSMUSG00000028444	protein_coding	Cntfr	ENSMUST00000064443	processed_transcript		4	-1	41695445	699
ENSMUSG00000105593	lincRNA	Gm42952	ENSMUST00000196784	lincRNA		5	1	125963530	372
ENSMUSG00000105593	lincRNA	Gm42952	ENSMUST00000198903	lincRNA		5	1	125967156	370
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000225674	protein_coding	alternative1	13	-1	58402141	2704
ENSMUSG00000028444	protein_coding	Cntfr	ENSMUST00000084701	processed_transcript		4	-1	41697089	676
ENSMUSG00000105593	lincRNA	Gm42952	ENSMUST00000197784	lincRNA		5	1	125967168	798
ENSMUSG00000105593	lincRNA	Gm42952	ENSMUST00000199324	lincRNA		5	1	125967173	506
ENSMUSG00000028444	protein_coding	Cntfr	ENSMUST00000145379	protein_coding		4	-1	41695935	410
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000177019	protein_coding	alternative1	13	-1	58402464	2626
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000128410	retained_intron		17	1	29678879	959
ENSMUSG00000102803	TEC	Gm37477	ENSMUST00000195215	TEC		9	-1	91381402	884
ENSMUSG00000105593	lincRNA	Gm42952	ENSMUST00000198572	lincRNA		5	1	125967178	408
ENSMUSG00000066197	protein_coding	Gpr139	ENSMUST00000084650	protein_coding	principal1	7	-1	119184603	4843
ENSMUSG00000031711	protein_coding	Zfp330	ENSMUST00000209601	processed_transcript		8	-1	82771039	2988
ENSMUSG00000044268	processed_pseudogene	Gm4895	ENSMUST00000181646	processed_pseudogene		10	-1	22154416	1137
ENSMUSG00000041957	protein_coding	Pkp2	ENSMUST00000162150	retained_intron		16	1	16213318	1959
ENSMUSG00000105593	lincRNA	Gm42952	ENSMUST00000196393	lincRNA		5	1	125967192	731
ENSMUSG00000041957	protein_coding	Pkp2	ENSMUST00000161342	retained_intron		16	1	16213318	2931
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000129864	protein_coding		17	1	29679261	367
ENSMUSG00000106378	lincRNA	Gm42945	ENSMUST00000197523	lincRNA		5	-1	125962362	537
ENSMUSG00000106378	lincRNA	Gm42945	ENSMUST00000196825	lincRNA		5	-1	125965845	444
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000130052	protein_coding		17	1	29680446	615
ENSMUSG00000113097	protein_coding	Gm47959	ENSMUST00000223439	protein_coding	principal1	1	1	83000548	933
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000127695	protein_coding		17	1	29681176	375
ENSMUSG00000048520	protein_coding	Fbxl13	ENSMUST00000137788	retained_intron		5	-1	21645587	2343
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000174266	nonsense_mediated_decay		1	-1	36244161	5399
ENSMUSG00000115358	processed_pseudogene	Gm49138	ENSMUST00000227289	processed_pseudogene		15	-1	18385441	93
ENSMUSG00000039911	protein_coding	Spsb1	ENSMUST00000038562	protein_coding	principal1	4	-1	149955043	3092
ENSMUSG00000048520	protein_coding	Fbxl13	ENSMUST00000115234	protein_coding		5	-1	21645557	2143
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000173250	retained_intron		1	-1	36150524	626
ENSMUSG00000101784	processed_pseudogene	Gm7553	ENSMUST00000185805	processed_pseudogene		1	-1	83004907	1426
ENSMUSG00000095961	protein_coding	Vmn2r102	ENSMUST00000171741	protein_coding	principal1	17	1	19660328	17430
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000037557	protein_coding	principal3	10	-1	123076025	5511
ENSMUSG00000048520	protein_coding	Fbxl13	ENSMUST00000153598	processed_transcript		5	-1	21603658	669
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000174224	nonsense_mediated_decay		1	-1	36173473	579
ENSMUSG00000058690	protein_coding	Ccser2	ENSMUST00000067700	protein_coding		14	-1	36968687	7334
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000172516	nonsense_mediated_decay		17	1	29682149	495
ENSMUSG00000048520	protein_coding	Fbxl13	ENSMUST00000200168	retained_intron		5	-1	21645634	2089
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000172610	retained_intron		17	1	29685795	557
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000125053	protein_coding		5	-1	125042812	5672
ENSMUSG00000106135	processed_pseudogene	Gm6543	ENSMUST00000197353	processed_pseudogene		5	1	21598740	808
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000043269	protein_coding	principal3	13	-1	58402502	2676
ENSMUSG00000029553	protein_coding	Tfec	ENSMUST00000031533	protein_coding	principal1	6	-1	16898441	1787
ENSMUSG00000039911	protein_coding	Spsb1	ENSMUST00000105685	protein_coding	principal1	4	-1	149909816	1537
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000162386	nonsense_mediated_decay		6	1	38551514	2861
ENSMUSG00000106294	processed_pseudogene	Gm8539	ENSMUST00000199822	processed_pseudogene		5	-1	21614494	501
ENSMUSG00000093592	unprocessed_pseudogene	Vmn2r-ps122	ENSMUST00000176687	unprocessed_pseudogene		17	1	19727139	906
ENSMUSG00000039911	protein_coding	Spsb1	ENSMUST00000105684	protein_coding	principal1	4	-1	149907289	1002
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000163012	processed_transcript		6	1	38551531	2291
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000219290	retained_intron		10	-1	122999807	459
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000173166	nonsense_mediated_decay		1	-1	36182634	1501
ENSMUSG00000029553	protein_coding	Tfec	ENSMUST00000202997	nonsense_mediated_decay		6	-1	16898399	1654
ENSMUSG00000039883	protein_coding	Lrrc17	ENSMUST00000199277	processed_transcript		5	1	21543559	1611
ENSMUSG00000039911	protein_coding	Spsb1	ENSMUST00000156897	protein_coding		4	-1	149953804	818
ENSMUSG00000029553	protein_coding	Tfec	ENSMUST00000201406	protein_coding		6	-1	16835263	572
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000173082	retained_intron		1	-1	36164959	548
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176207	protein_coding	alternative1	13	-1	58402649	2653
ENSMUSG00000004341	protein_coding	Gpx6	ENSMUST00000004453	protein_coding	principal1	13	1	21312125	1340
ENSMUSG00000039911	protein_coding	Spsb1	ENSMUST00000167342	protein_coding		4	-1	149922471	457
ENSMUSG00000029553	protein_coding	Tfec	ENSMUST00000201104	retained_intron		6	-1	16898441	3384
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000162718	processed_transcript		6	1	38551531	2846
ENSMUSG00000029553	protein_coding	Tfec	ENSMUST00000200984	retained_intron		6	-1	16845996	688
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000170935	protein_coding	alternative2	10	-1	123076025	5302
ENSMUSG00000039911	protein_coding	Spsb1	ENSMUST00000149360	protein_coding		4	-1	149931556	355
ENSMUSG00000032368	protein_coding	Zic1	ENSMUST00000034927	protein_coding	principal1	9	-1	91365768	5606
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000160922	retained_intron		6	1	38551531	3448
ENSMUSG00000004341	protein_coding	Gpx6	ENSMUST00000136668	processed_transcript		13	1	21317258	475
ENSMUSG00000039911	protein_coding	Spsb1	ENSMUST00000125135	protein_coding		4	-1	149942618	597
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000161227	protein_coding		6	1	38551803	2405
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000174716	retained_intron		1	-1	36244107	3064
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000218735	retained_intron		10	-1	123013431	765
ENSMUSG00000039911	protein_coding	Spsb1	ENSMUST00000149743	protein_coding		4	-1	149946098	441
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000219241	retained_intron		10	-1	123015156	882
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000160582	processed_transcript		6	1	38551843	382
ENSMUSG00000032540	protein_coding	Abhd5	ENSMUST00000156520	protein_coding	principal1	9	1	122351608	3157
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000174142	nonsense_mediated_decay		1	-1	36210030	677
ENSMUSG00000116639	TEC	Gm49730	ENSMUST00000231830	TEC		16	-1	35867951	1773
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000219515	retained_intron		10	-1	123023116	481
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000159936	nonsense_mediated_decay		6	1	38555723	2898
ENSMUSG00000038611	protein_coding	Phrf1	ENSMUST00000106027	protein_coding	principal1	7	1	141228789	5248
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000172592	retained_intron		1	-1	36208204	542
ENSMUSG00000039883	protein_coding	Lrrc17	ENSMUST00000035651	protein_coding	principal1	5	1	21543563	2154
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000177051	retained_intron		13	-1	58393868	874
ENSMUSG00000037470	protein_coding	Uggt1	ENSMUST00000192159	retained_intron		1	-1	36244720	1082
ENSMUSG00000039911	protein_coding	Spsb1	ENSMUST00000156451	processed_transcript		4	-1	149955043	339
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000219001	retained_intron		10	-1	123033131	4053
ENSMUSG00000032368	protein_coding	Zic1	ENSMUST00000065360	protein_coding	principal1	9	-1	91365810	2811
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000160511	nonsense_mediated_decay		6	1	38557641	2419
ENSMUSG00000039911	protein_coding	Spsb1	ENSMUST00000135896	processed_transcript		4	-1	149955031	367
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000220201	retained_intron		10	-1	123027460	882
ENSMUSG00000101239	processed_pseudogene	Gm28304	ENSMUST00000185977	processed_pseudogene		Y	-1	69765115	312
ENSMUSG00000058690	protein_coding	Ccser2	ENSMUST00000090024	protein_coding	principal3	14	-1	36968777	7509
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000218253	processed_transcript		10	-1	123031065	225
ENSMUSG00000032368	protein_coding	Zic1	ENSMUST00000173121	processed_transcript		9	-1	91363054	395
ENSMUSG00000113445	processed_pseudogene	Gm48661	ENSMUST00000221644	processed_pseudogene		13	-1	13412794	355
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176257	retained_intron		13	-1	58394785	1380
ENSMUSG00000038611	protein_coding	Phrf1	ENSMUST00000134057	processed_transcript		7	1	141234201	650
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000162530	retained_intron		6	1	38559215	877
ENSMUSG00000038611	protein_coding	Phrf1	ENSMUST00000211144	retained_intron		7	1	141235423	2934
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000138939	retained_intron		17	1	29687056	3075
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176359	retained_intron		13	-1	58393975	731
ENSMUSG00000034602	protein_coding	Mon2	ENSMUST00000219203	protein_coding		10	-1	123076383	1844
ENSMUSG00000058690	protein_coding	Ccser2	ENSMUST00000183007	protein_coding		14	-1	36906318	1293
ENSMUSG00000100971	lincRNA	Gm28824	ENSMUST00000187496	lincRNA		Y	-1	69769872	2167
ENSMUSG00000038611	protein_coding	Phrf1	ENSMUST00000122143	protein_coding		7	1	141243499	4864
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176797	protein_coding		13	-1	58395198	810
ENSMUSG00000101875	processed_pseudogene	Gm6028	ENSMUST00000077111	processed_pseudogene		1	-1	111881308	574
ENSMUSG00000032540	protein_coding	Abhd5	ENSMUST00000035128	nonsense_mediated_decay		9	1	122351730	1386
ENSMUSG00000113444	processed_pseudogene	Gm48672	ENSMUST00000221774	processed_pseudogene		13	1	13417147	354
ENSMUSG00000032540	protein_coding	Abhd5	ENSMUST00000111497	protein_coding		9	1	122351730	2576
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000235028	processed_transcript		17	1	29694410	792
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000224531	retained_intron		13	-1	58394084	514
ENSMUSG00000032540	protein_coding	Abhd5	ENSMUST00000176005	processed_transcript		9	1	122351732	467
ENSMUSG00000029823	protein_coding	Luc7l2	ENSMUST00000160430	retained_intron		6	1	38570102	3906
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000234278	retained_intron		17	1	29698660	232
ENSMUSG00000038611	protein_coding	Phrf1	ENSMUST00000132540	nonsense_mediated_decay		7	1	141254914	668
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000226015	retained_intron		13	-1	58393889	692
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000225866	retained_intron		13	-1	58394170	566
ENSMUSG00000035356	protein_coding	Nfkbiz	ENSMUST00000114458	protein_coding	principal3	16	-1	55822138	3627
ENSMUSG00000038611	protein_coding	Phrf1	ENSMUST00000122868	retained_intron		7	1	141256003	1283
ENSMUSG00000036078	protein_coding	Sigmar1	ENSMUST00000059354	protein_coding	principal1	4	-1	41741359	1640
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000234716	retained_intron		17	1	29698798	3600
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000224782	retained_intron		13	-1	58394696	743
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176849	protein_coding		13	-1	58402142	1004
ENSMUSG00000024019	protein_coding	Cmtr1	ENSMUST00000234666	retained_intron		17	1	29699681	702
ENSMUSG00000032540	protein_coding	Abhd5	ENSMUST00000175973	nonsense_mediated_decay		9	1	122351732	710
ENSMUSG00000040663	protein_coding	Clcf1	ENSMUST00000046506	protein_coding	principal1	19	1	4214238	1847
ENSMUSG00000032540	protein_coding	Abhd5	ENSMUST00000214061	retained_intron		9	1	122351745	2417
ENSMUSG00000036078	protein_coding	Sigmar1	ENSMUST00000071561	protein_coding		4	-1	41741359	1547
ENSMUSG00000071655	protein_coding	Ubxn1	ENSMUST00000237220	retained_intron		19	1	8871496	2847
ENSMUSG00000038611	protein_coding	Phrf1	ENSMUST00000142572	protein_coding		7	1	141259190	2519
ENSMUSG00000041957	protein_coding	Pkp2	ENSMUST00000039408	protein_coding	principal1	16	1	16213318	2918
ENSMUSG00000032540	protein_coding	Abhd5	ENSMUST00000216775	processed_transcript		9	1	122351789	387
ENSMUSG00000040663	protein_coding	Clcf1	ENSMUST00000132305	retained_intron		19	1	4214264	3550
ENSMUSG00000022533	protein_coding	Atp13a3	ENSMUST00000061350	protein_coding	alternative2	16	-1	30388530	7220
ENSMUSG00000032540	protein_coding	Abhd5	ENSMUST00000154161	protein_coding		9	1	122363653	561
ENSMUSG00000058690	protein_coding	Ccser2	ENSMUST00000183038	protein_coding		14	-1	36935572	1681
ENSMUSG00000040663	protein_coding	Clcf1	ENSMUST00000138090	nonsense_mediated_decay		19	1	4214305	1878
ENSMUSG00000081423	processed_pseudogene	Gm12882	ENSMUST00000121696	processed_pseudogene		4	-1	121115305	517
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000173342	protein_coding		9	1	91362413	322
ENSMUSG00000111192	lincRNA	Gm47128	ENSMUST00000214078	lincRNA		9	1	122422136	247
ENSMUSG00000038611	protein_coding	Phrf1	ENSMUST00000130687	protein_coding		7	1	141260397	1189
ENSMUSG00000040663	protein_coding	Clcf1	ENSMUST00000235355	protein_coding		19	1	4214389	380
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000172978	processed_transcript		9	1	91368367	688
ENSMUSG00000036078	protein_coding	Sigmar1	ENSMUST00000148223	processed_transcript		4	-1	41745072	845
ENSMUSG00000038611	protein_coding	Phrf1	ENSMUST00000144250	retained_intron		7	1	141261679	518
ENSMUSG00000090478	unprocessed_pseudogene	Gm5656	ENSMUST00000171020	unprocessed_pseudogene		12	-1	103704619	1096
ENSMUSG00000040663	protein_coding	Clcf1	ENSMUST00000126457	processed_transcript		19	1	4214594	646
ENSMUSG00000036078	protein_coding	Sigmar1	ENSMUST00000133590	processed_transcript		4	-1	41755399	553
ENSMUSG00000111146	lincRNA	Gm35454	ENSMUST00000214817	lincRNA		9	-1	122438165	1101
ENSMUSG00000031711	protein_coding	Zfp330	ENSMUST00000034147	protein_coding	principal1	8	-1	82774160	1675
ENSMUSG00000111146	lincRNA	Gm35454	ENSMUST00000213143	lincRNA		9	-1	122438134	1357
ENSMUSG00000082891	processed_pseudogene	Gm12881	ENSMUST00000121191	processed_pseudogene		4	-1	121121296	203
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000173054	protein_coding		9	1	91368812	641
ENSMUSG00000036078	protein_coding	Sigmar1	ENSMUST00000142840	retained_intron		4	-1	41741186	613
ENSMUSG00000022533	protein_coding	Atp13a3	ENSMUST00000229503	protein_coding		16	-1	30333890	924
ENSMUSG00000110725	processed_pseudogene	Gm47129	ENSMUST00000214531	processed_pseudogene		9	1	122478750	513
ENSMUSG00000058690	protein_coding	Ccser2	ENSMUST00000183316	protein_coding		14	-1	36909181	1218
ENSMUSG00000022533	protein_coding	Atp13a3	ENSMUST00000229750	processed_transcript		16	-1	30333848	825
ENSMUSG00000036078	protein_coding	Sigmar1	ENSMUST00000149647	retained_intron		4	-1	41741048	335
ENSMUSG00000029994	protein_coding	Anxa4	ENSMUST00000113675	protein_coding	principal1	6	-1	86765910	2030
ENSMUSG00000081305	processed_pseudogene	Gm12879	ENSMUST00000120003	processed_pseudogene		4	1	121130118	1182
ENSMUSG00000022533	protein_coding	Atp13a3	ENSMUST00000149882	retained_intron		16	-1	30357243	310
ENSMUSG00000111244	processed_pseudogene	Gm47130	ENSMUST00000216783	processed_pseudogene		9	-1	122511611	341
ENSMUSG00000031711	protein_coding	Zfp330	ENSMUST00000209727	retained_intron		8	-1	82767537	715
ENSMUSG00000036078	protein_coding	Sigmar1	ENSMUST00000146655	processed_transcript		4	-1	41741320	468
ENSMUSG00000108570	processed_pseudogene	Gm7726	ENSMUST00000206241	processed_pseudogene		7	1	74699856	231
ENSMUSG00000110984	lincRNA	Gm47131	ENSMUST00000214925	lincRNA		9	-1	122513598	731
ENSMUSG00000031711	protein_coding	Zfp330	ENSMUST00000211462	nonsense_mediated_decay		8	-1	82774114	761
ENSMUSG00000068196	protein_coding	Col8a1	ENSMUST00000089332	protein_coding	principal1	16	-1	57754737	5108
ENSMUSG00000036078	protein_coding	Sigmar1	ENSMUST00000123524	processed_transcript		4	-1	41756157	1087
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000174611	retained_intron		9	1	91368894	2620
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176888	retained_intron		13	-1	58395720	522
ENSMUSG00000031711	protein_coding	Zfp330	ENSMUST00000209587	retained_intron		8	-1	82769472	895
ENSMUSG00000111221	lincRNA	Gm47133	ENSMUST00000214554	lincRNA		9	-1	122535020	1053
ENSMUSG00000035356	protein_coding	Nfkbiz	ENSMUST00000036273	protein_coding	principal3	16	-1	55838899	4115
ENSMUSG00000031711	protein_coding	Zfp330	ENSMUST00000210958	retained_intron		8	-1	82774145	457
ENSMUSG00000022533	protein_coding	Atp13a3	ENSMUST00000153656	retained_intron		16	-1	30388485	793
ENSMUSG00000068196	protein_coding	Col8a1	ENSMUST00000232382	retained_intron		16	-1	57754715	2801
ENSMUSG00000022533	protein_coding	Atp13a3	ENSMUST00000229616	protein_coding		16	-1	30405975	662
ENSMUSG00000022533	protein_coding	Atp13a3	ENSMUST00000136065	retained_intron		16	-1	30388837	2250
ENSMUSG00000022533	protein_coding	Atp13a3	ENSMUST00000100013	protein_coding	principal4	16	-1	30388530	7310
ENSMUSG00000058690	protein_coding	Ccser2	ENSMUST00000182797	protein_coding		14	-1	36919333	1482
ENSMUSG00000114455	processed_pseudogene	Gm48797	ENSMUST00000226093	processed_pseudogene		14	1	14123570	406
ENSMUSG00000097736	lincRNA	9530059O14Rik	ENSMUST00000181682	lincRNA		9	1	122572499	2093
ENSMUSG00000024854	protein_coding	Pold4	ENSMUST00000025773	protein_coding	principal1	19	1	4231899	913
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000024817	protein_coding	principal1	17	1	29614790	5404
ENSMUSG00000097736	lincRNA	9530059O14Rik	ENSMUST00000181107	lincRNA		9	1	122572501	3978
ENSMUSG00000033857	protein_coding	Engase	ENSMUST00000135383	protein_coding	principal1	11	1	118476829	4064
ENSMUSG00000041360	protein_coding	Pum3	ENSMUST00000076219	protein_coding	principal1	19	-1	27429825	3471
ENSMUSG00000051591	protein_coding	Olfr697	ENSMUST00000217734	protein_coding	principal1	7	-1	106742443	1190
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000162588	protein_coding		17	1	29614822	924
ENSMUSG00000024854	protein_coding	Pold4	ENSMUST00000237518	protein_coding		19	1	4231986	631
ENSMUSG00000087095	antisense	Emx2os	ENSMUST00000136990	antisense		19	-1	59458635	5023
ENSMUSG00000058690	protein_coding	Ccser2	ENSMUST00000182042	protein_coding	alternative1	14	-1	36919535	1420
ENSMUSG00000051591	protein_coding	Olfr697	ENSMUST00000050541	protein_coding	principal1	7	-1	106741956	1047
ENSMUSG00000033857	protein_coding	Engase	ENSMUST00000172279	nonsense_mediated_decay		11	1	118476941	352
ENSMUSG00000001998	protein_coding	Ap4e1	ENSMUST00000110394	protein_coding		2	1	127008724	2271
ENSMUSG00000058690	protein_coding	Ccser2	ENSMUST00000182576	protein_coding		14	-1	36926863	433
ENSMUSG00000024854	protein_coding	Pold4	ENSMUST00000235306	protein_coding		19	1	4232438	645
ENSMUSG00000097736	lincRNA	9530059O14Rik	ENSMUST00000215759	lincRNA		9	1	122572502	1606
ENSMUSG00000097736	lincRNA	9530059O14Rik	ENSMUST00000181719	lincRNA		9	1	122572502	2867
ENSMUSG00000058690	protein_coding	Ccser2	ENSMUST00000182558	retained_intron		14	-1	36886360	803
ENSMUSG00000111143	lincRNA	Gm47134	ENSMUST00000216699	lincRNA		9	-1	122647830	517
ENSMUSG00000035356	protein_coding	Nfkbiz	ENSMUST00000114457	protein_coding	alternative2	16	-1	55838899	3767
ENSMUSG00000117873	protein_coding	Gm45928	ENSMUST00000236364	nonsense_mediated_decay		19	1	4214357	473
ENSMUSG00000029994	protein_coding	Anxa4	ENSMUST00000001187	protein_coding	principal1	6	-1	86793584	2002
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176609	retained_intron		13	-1	58397065	737
ENSMUSG00000111837	transcribed_unprocessed_pseudogene	Gm47135	ENSMUST00000215737	processed_transcript		9	1	122682742	719
ENSMUSG00000058690	protein_coding	Ccser2	ENSMUST00000182635	processed_transcript		14	-1	36939945	917
ENSMUSG00000035356	protein_coding	Nfkbiz	ENSMUST00000231463	processed_transcript		16	-1	55818515	188
ENSMUSG00000111837	transcribed_unprocessed_pseudogene	Gm47135	ENSMUST00000216314	transcribed_unprocessed_pseudogene		9	1	122683055	253
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176305	protein_coding		13	-1	58402103	900
ENSMUSG00000027564	protein_coding	Cypt12	ENSMUST00000029080	protein_coding	principal1	3	1	17948410	550
ENSMUSG00000117873	protein_coding	Gm45928	ENSMUST00000237171	protein_coding	principal1	19	1	4214430	357
ENSMUSG00000035356	protein_coding	Nfkbiz	ENSMUST00000139373	processed_transcript		16	-1	55838899	1391
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176725	retained_intron		13	-1	58396946	459
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000172646	protein_coding	principal1	9	1	91368970	2535
ENSMUSG00000043969	protein_coding	Emx2	ENSMUST00000062216	protein_coding	principal1	19	1	59458372	2916
ENSMUSG00000048602	protein_coding	Morc2b	ENSMUST00000234062	processed_transcript		17	-1	33139632	1036
ENSMUSG00000111577	lincRNA	Gm47136	ENSMUST00000215837	lincRNA		9	-1	122714333	453
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000225176	protein_coding		13	-1	58401914	839
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000172485	nonsense_mediated_decay		17	1	29614854	2042
ENSMUSG00000041360	protein_coding	Pum3	ENSMUST00000235859	nonsense_mediated_decay		19	-1	27429820	2179
ENSMUSG00000094623	unprocessed_pseudogene	Gm21737	ENSMUST00000178112	unprocessed_pseudogene		Y	1	31373417	664
ENSMUSG00000041360	protein_coding	Pum3	ENSMUST00000236585	processed_transcript		19	-1	27412264	515
ENSMUSG00000043969	protein_coding	Emx2	ENSMUST00000174353	protein_coding		19	1	59459519	1580
ENSMUSG00000029994	protein_coding	Anxa4	ENSMUST00000127152	nonsense_mediated_decay		6	-1	86765824	2623
ENSMUSG00000111068	lincRNA	Gm35501	ENSMUST00000213492	lincRNA		9	1	122686799	783
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000234498	protein_coding		17	1	29614864	686
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000170572	retained_intron		9	1	91369498	2170
ENSMUSG00000041360	protein_coding	Pum3	ENSMUST00000235852	retained_intron		19	-1	27399387	594
ENSMUSG00000033857	protein_coding	Engase	ENSMUST00000166995	nonsense_mediated_decay		11	1	118476946	922
ENSMUSG00000111068	lincRNA	Gm35501	ENSMUST00000215101	lincRNA		9	1	122689629	459
ENSMUSG00000048602	protein_coding	Morc2b	ENSMUST00000053896	protein_coding	principal1	17	-1	33139683	3712
ENSMUSG00000041360	protein_coding	Pum3	ENSMUST00000236705	retained_intron		19	-1	27413572	3843
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000225031	nonsense_mediated_decay		13	-1	58402115	708
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000161952	processed_transcript		17	1	29614890	453
ENSMUSG00000029994	protein_coding	Anxa4	ENSMUST00000135921	retained_intron		6	-1	86745057	784
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000174212	protein_coding		9	1	91371004	596
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000234362	nonsense_mediated_decay		17	1	29614968	1780
ENSMUSG00000029994	protein_coding	Anxa4	ENSMUST00000155456	protein_coding		6	-1	86760737	684
ENSMUSG00000035356	protein_coding	Nfkbiz	ENSMUST00000096026	protein_coding	alternative2	16	-1	55838854	4067
ENSMUSG00000043969	protein_coding	Emx2	ENSMUST00000174573	processed_transcript		19	1	59462802	422
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000175847	nonsense_mediated_decay		13	-1	58402487	723
ENSMUSG00000111441	processed_pseudogene	Gm47137	ENSMUST00000216013	processed_pseudogene		9	1	122715203	162
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000173933	protein_coding	principal1	9	1	91371213	1764
ENSMUSG00000029994	protein_coding	Anxa4	ENSMUST00000123732	protein_coding		6	-1	86765807	805
ENSMUSG00000037260	protein_coding	Hgsnat	ENSMUST00000037609	protein_coding	principal1	8	-1	25976753	2694
ENSMUSG00000041360	protein_coding	Pum3	ENSMUST00000235631	retained_intron		19	-1	27421483	3056
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000234245	retained_intron		17	1	29615785	3340
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000173449	processed_transcript		17	1	29616136	790
ENSMUSG00000028108	protein_coding	Ecm1	ENSMUST00000117507	protein_coding	principal3	3	-1	95739569	1900
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000177060	protein_coding		13	-1	58402507	676
ENSMUSG00000041360	protein_coding	Pum3	ENSMUST00000235297	protein_coding		19	-1	27427109	1721
ENSMUSG00000048602	protein_coding	Morc2b	ENSMUST00000131954	protein_coding	principal1	17	-1	33139499	3857
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000162417	retained_intron		17	1	29628636	697
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000161242	retained_intron		17	1	29631532	862
ENSMUSG00000041360	protein_coding	Pum3	ENSMUST00000237274	retained_intron		19	-1	27420099	538
ENSMUSG00000071655	protein_coding	Ubxn1	ENSMUST00000166407	protein_coding	principal1	19	1	8871559	1033
ENSMUSG00000069763	protein_coding	Tmem100	ENSMUST00000092788	protein_coding	principal1	11	1	90030348	1767
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000224524	protein_coding		13	-1	58401265	761
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000234816	retained_intron		17	1	29633518	1763
ENSMUSG00000029994	protein_coding	Anxa4	ENSMUST00000204441	protein_coding		6	-1	86793564	1020
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000174802	retained_intron		9	1	91371350	1734
ENSMUSG00000034422	protein_coding	Parp14	ENSMUST00000042665	protein_coding	principal1	16	-1	35871544	7417
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000172858	retained_intron		9	1	91378197	1591
ENSMUSG00000041360	protein_coding	Pum3	ENSMUST00000236041	retained_intron		19	-1	27426014	659
ENSMUSG00000029994	protein_coding	Anxa4	ENSMUST00000204398	protein_coding		6	-1	86793564	940
ENSMUSG00000090083	protein_coding	Rnf8	ENSMUST00000172800	retained_intron		17	1	29634486	829
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176269	retained_intron		13	-1	58398017	833
ENSMUSG00000038725	protein_coding	Pkhd1l1	ENSMUST00000232355	retained_intron		15	1	44457494	1045
ENSMUSG00000037260	protein_coding	Hgsnat	ENSMUST00000210894	retained_intron		8	-1	25952143	870
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000218061	protein_coding		10	1	78574346	472
ENSMUSG00000041360	protein_coding	Pum3	ENSMUST00000236702	protein_coding		19	-1	27427437	323
ENSMUSG00000094891	protein_coding	Olfr55	ENSMUST00000214891	protein_coding		17	1	33168447	4428
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000066384	protein_coding		9	1	91378642	3891
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000177117	protein_coding		13	-1	58398017	476
ENSMUSG00000037260	protein_coding	Hgsnat	ENSMUST00000211550	protein_coding		8	-1	25974053	485
ENSMUSG00000094891	protein_coding	Olfr55	ENSMUST00000216633	protein_coding	principal1	17	1	33168525	4758
ENSMUSG00000019806	protein_coding	Aig1	ENSMUST00000019942	protein_coding		10	-1	13868957	1439
ENSMUSG00000071655	protein_coding	Ubxn1	ENSMUST00000238036	protein_coding	principal1	19	1	8871593	1291
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000224342	protein_coding		13	-1	58401570	515
ENSMUSG00000028108	protein_coding	Ecm1	ENSMUST00000029753	protein_coding	alternative2	3	-1	95739567	1894
ENSMUSG00000094891	protein_coding	Olfr55	ENSMUST00000214888	protein_coding		17	1	33168525	4675
ENSMUSG00000084373	processed_pseudogene	Rps2-ps4	ENSMUST00000121977	processed_pseudogene		11	1	53645744	633
ENSMUSG00000037260	protein_coding	Hgsnat	ENSMUST00000209420	processed_transcript		8	-1	25972228	489
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000224836	nonsense_mediated_decay		13	-1	58402485	452
ENSMUSG00000036972	protein_coding	Zic4	ENSMUST00000085242	processed_transcript		9	1	91382410	1900
ENSMUSG00000028108	protein_coding	Ecm1	ENSMUST00000144958	retained_intron		3	-1	95735018	518
ENSMUSG00000052417	protein_coding	Olfr720	ENSMUST00000206298	protein_coding	principal1	14	-1	14186676	4437
ENSMUSG00000094891	protein_coding	Olfr55	ENSMUST00000112168	protein_coding	principal1	17	1	33176416	948
ENSMUSG00000029994	protein_coding	Anxa4	ENSMUST00000129772	retained_intron		6	-1	86765910	2184
ENSMUSG00000071655	protein_coding	Ubxn1	ENSMUST00000096255	protein_coding		19	1	8871660	1127
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000224030	protein_coding		13	-1	58401393	485
ENSMUSG00000019806	protein_coding	Aig1	ENSMUST00000162610	protein_coding	principal1	10	-1	13868980	1554
ENSMUSG00000117534	antisense	Gm20161	ENSMUST00000234958	antisense		17	-1	29658336	2504
ENSMUSG00000052417	protein_coding	Olfr720	ENSMUST00000216079	protein_coding	principal1	14	-1	14186676	4692
ENSMUSG00000052417	protein_coding	Olfr720	ENSMUST00000217642	protein_coding	principal1	14	-1	14186838	4832
ENSMUSG00000107961	lincRNA	Gm44036	ENSMUST00000204551	lincRNA		6	1	86733489	336
ENSMUSG00000107160	processed_pseudogene	Gm42666	ENSMUST00000201954	processed_pseudogene		5	1	76410354	152
ENSMUSG00000034422	protein_coding	Parp14	ENSMUST00000142946	retained_intron		16	-1	35871382	4026
ENSMUSG00000019806	protein_coding	Aig1	ENSMUST00000161729	retained_intron		10	-1	13868976	3254
ENSMUSG00000106982	processed_pseudogene	Gm42665	ENSMUST00000202100	processed_pseudogene		5	-1	76451774	586
ENSMUSG00000089900	antisense	Tbc1d22bos	ENSMUST00000163069	antisense		17	-1	29596305	1349
ENSMUSG00000034422	protein_coding	Parp14	ENSMUST00000135669	retained_intron		16	-1	35871382	580
ENSMUSG00000089900	antisense	Tbc1d22bos	ENSMUST00000159875	antisense		17	-1	29596279	847
ENSMUSG00000052417	protein_coding	Olfr720	ENSMUST00000035250	protein_coding	principal1	14	-1	14176117	1023
ENSMUSG00000091614	protein_coding	Gm17657	ENSMUST00000234305	protein_coding	principal1	17	-1	29549638	1511
ENSMUSG00000019806	protein_coding	Aig1	ENSMUST00000162798	retained_intron		10	-1	13861326	4369
ENSMUSG00000108921	processed_pseudogene	Gm4083	ENSMUST00000207158	processed_pseudogene		7	-1	119301707	451
ENSMUSG00000091614	protein_coding	Gm17657	ENSMUST00000168877	protein_coding		17	-1	29519790	510
ENSMUSG00000019806	protein_coding	Aig1	ENSMUST00000162869	processed_transcript		10	-1	13868829	441
ENSMUSG00000028108	protein_coding	Ecm1	ENSMUST00000123143	protein_coding		3	-1	95739549	906
ENSMUSG00000108260	TEC	Gm3793	ENSMUST00000204973	TEC		6	-1	56906582	672
ENSMUSG00000019806	protein_coding	Aig1	ENSMUST00000162174	processed_transcript		10	-1	13844286	642
ENSMUSG00000110685	transcribed_unprocessed_pseudogene	Gm5373	ENSMUST00000212931	processed_transcript		8	-1	71853261	2964
ENSMUSG00000019806	protein_coding	Aig1	ENSMUST00000105534	protein_coding		10	-1	13868822	617
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000177377	retained_intron		13	-1	58402110	775
ENSMUSG00000059087	protein_coding	Olfr698	ENSMUST00000216255	protein_coding	principal1	7	-1	106755397	4024
ENSMUSG00000019139	protein_coding	Isyna1	ENSMUST00000211117	protein_coding		8	1	70594373	358
ENSMUSG00000028108	protein_coding	Ecm1	ENSMUST00000131376	protein_coding		3	-1	95739567	1011
ENSMUSG00000059087	protein_coding	Olfr698	ENSMUST00000215892	processed_transcript		7	-1	106755397	3909
ENSMUSG00000059087	protein_coding	Olfr698	ENSMUST00000214306	protein_coding	principal1	7	-1	106755384	4006
ENSMUSG00000094865	processed_pseudogene	Gm7426	ENSMUST00000179046	processed_pseudogene		13	-1	13419169	404
ENSMUSG00000028108	protein_coding	Ecm1	ENSMUST00000128885	protein_coding		3	-1	95739569	880
ENSMUSG00000110685	transcribed_unprocessed_pseudogene	Gm5373	ENSMUST00000212113	transcribed_unprocessed_pseudogene		8	-1	71857281	1050
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000176558	protein_coding		13	-1	58402116	1053
ENSMUSG00000019139	protein_coding	Isyna1	ENSMUST00000210358	retained_intron		8	1	70594473	621
ENSMUSG00000059087	protein_coding	Olfr698	ENSMUST00000074981	protein_coding	principal1	7	-1	106753386	936
ENSMUSG00000028108	protein_coding	Ecm1	ENSMUST00000153026	protein_coding		3	-1	95739544	793
ENSMUSG00000020424	protein_coding	Castor1	ENSMUST00000020699	protein_coding	principal1	11	1	4218225	1574
ENSMUSG00000031450	protein_coding	Grk1	ENSMUST00000209909	protein_coding	principal1	8	1	13405081	7431
ENSMUSG00000052997	protein_coding	Uba2	ENSMUST00000102746	protein_coding	principal1	7	-1	34168575	2579
ENSMUSG00000099555	lincRNA	Gm28081	ENSMUST00000185321	lincRNA		Y	1	69801845	1497
ENSMUSG00000028108	protein_coding	Ecm1	ENSMUST00000137912	protein_coding		3	-1	95739549	529
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000175939	retained_intron		13	-1	58402502	780
ENSMUSG00000021546	protein_coding	Hnrnpk	ENSMUST00000223822	protein_coding		13	-1	58402055	379
ENSMUSG00000099555	lincRNA	Gm28081	ENSMUST00000186461	lincRNA		Y	1	69802297	437
ENSMUSG00000109293	protein_coding	Dcst2	ENSMUST00000208216	protein_coding	principal1	3	1	89361975	2285
ENSMUSG00000028108	protein_coding	Ecm1	ENSMUST00000155815	retained_intron		3	-1	95738223	780
ENSMUSG00000091771	protein_coding	Vmn2r103	ENSMUST00000172203	protein_coding	principal1	17	1	19773363	2571
ENSMUSG00000052997	protein_coding	Uba2	ENSMUST00000205711	retained_intron		7	-1	34142086	1373
ENSMUSG00000028108	protein_coding	Ecm1	ENSMUST00000147217	protein_coding		3	-1	95739569	367
ENSMUSG00000091204	protein_coding	Gm7271	ENSMUST00000191515	protein_coding	principal1	5	1	76484040	836
ENSMUSG00000091204	protein_coding	Gm7271	ENSMUST00000172369	protein_coding	principal1	5	1	76484331	519
ENSMUSG00000085074	lincRNA	Gm11494	ENSMUST00000142279	lincRNA		11	-1	90143624	1738
ENSMUSG00000031450	protein_coding	Grk1	ENSMUST00000211027	retained_intron		8	1	13405106	4384
ENSMUSG00000114909	processed_pseudogene	Csnk2a1-ps1	ENSMUST00000225081	processed_pseudogene		14	1	14197306	1159
ENSMUSG00000098374	protein_coding	Gm28043	ENSMUST00000130871	nonsense_mediated_decay	principal1	17	1	29614876	6521
ENSMUSG00000082896	processed_pseudogene	Gm5844	ENSMUST00000119417	processed_pseudogene		3	1	18008806	2191
ENSMUSG00000052997	protein_coding	Uba2	ENSMUST00000152037	protein_coding		7	-1	34144548	630
ENSMUSG00000094985	protein_coding	Topaz1	ENSMUST00000178679	protein_coding	principal1	9	1	122747346	5030
ENSMUSG00000114268	processed_pseudogene	Gm48841	ENSMUST00000226085	processed_pseudogene		14	-1	14257503	2841
ENSMUSG00000052997	protein_coding	Uba2	ENSMUST00000124824	retained_intron		7	-1	34143269	609
ENSMUSG00000114497	processed_pseudogene	Gm48852	ENSMUST00000225214	processed_pseudogene		14	1	14258286	283
ENSMUSG00000112041	lincRNA	9530020I12Rik	ENSMUST00000218277	lincRNA		12	-1	11204502	884
ENSMUSG00000052997	protein_coding	Uba2	ENSMUST00000142763	retained_intron		7	-1	34146283	631
ENSMUSG00000031450	protein_coding	Grk1	ENSMUST00000033827	protein_coding	principal1	8	1	13405081	7425
ENSMUSG00000052997	protein_coding	Uba2	ENSMUST00000175991	nonsense_mediated_decay		7	-1	34161626	608
ENSMUSG00000112041	lincRNA	9530020I12Rik	ENSMUST00000219371	lincRNA		12	-1	11204381	819
ENSMUSG00000096714	protein_coding	Olfr699	ENSMUST00000215952	protein_coding	principal1	7	-1	106793198	3669
ENSMUSG00000094985	protein_coding	Topaz1	ENSMUST00000213519	retained_intron		9	1	122750603	550
ENSMUSG00000085211	antisense	B430219N15Rik	ENSMUST00000147230	antisense		10	1	7780268	835
ENSMUSG00000001998	protein_coding	Ap4e1	ENSMUST00000002063	protein_coding	principal1	2	1	127008730	4600
ENSMUSG00000096714	protein_coding	Olfr699	ENSMUST00000216307	protein_coding	principal1	7	-1	106793198	4193
ENSMUSG00000019139	protein_coding	Isyna1	ENSMUST00000209285	nonsense_mediated_decay		8	1	70594473	1553
ENSMUSG00000112041	lincRNA	9530020I12Rik	ENSMUST00000218368	lincRNA		12	-1	11204409	1235
ENSMUSG00000085211	antisense	B430219N15Rik	ENSMUST00000180853	antisense		10	1	7780185	1105
ENSMUSG00000052997	protein_coding	Uba2	ENSMUST00000139916	retained_intron		7	-1	34157357	813
ENSMUSG00000049728	protein_coding	Zfp668	ENSMUST00000054415	protein_coding	principal1	7	-1	127876828	5768
ENSMUSG00000096714	protein_coding	Olfr699	ENSMUST00000065024	protein_coding	principal1	7	-1	106790999	951
ENSMUSG00000101369	unprocessed_pseudogene	Gm28080	ENSMUST00000188552	unprocessed_pseudogene		Y	-1	69909004	722
ENSMUSG00000052997	protein_coding	Uba2	ENSMUST00000134856	nonsense_mediated_decay		7	-1	34164418	497
ENSMUSG00000079580	protein_coding	Tmem217	ENSMUST00000114683	protein_coding	principal1	17	-1	29549593	930
ENSMUSG00000086756	antisense	Gm14051	ENSMUST00000131603	antisense		2	1	132144533	377
ENSMUSG00000052997	protein_coding	Uba2	ENSMUST00000156253	protein_coding		7	-1	34169599	608
ENSMUSG00000082990	processed_pseudogene	Gm14052	ENSMUST00000121434	processed_pseudogene		2	1	132099869	1031
ENSMUSG00000001998	protein_coding	Ap4e1	ENSMUST00000110393	nonsense_mediated_decay		2	1	127008752	731
ENSMUSG00000035367	protein_coding	Rmi1	ENSMUST00000225828	protein_coding	principal1	13	1	58402248	3594
ENSMUSG00000052997	protein_coding	Uba2	ENSMUST00000206651	retained_intron		7	-1	34164341	1435
ENSMUSG00000033857	protein_coding	Engase	ENSMUST00000171769	nonsense_mediated_decay		11	1	118476960	3807
ENSMUSG00000049728	protein_coding	Zfp668	ENSMUST00000106263	protein_coding	principal1	7	-1	127876780	3132
ENSMUSG00000047002	protein_coding	Msgn1	ENSMUST00000049877	protein_coding	principal1	12	-1	11208972	613
ENSMUSG00000109840	processed_pseudogene	Gm45386	ENSMUST00000210194	processed_pseudogene		8	1	51137630	218
ENSMUSG00000079580	protein_coding	Tmem217	ENSMUST00000234718	protein_coding	principal1	17	-1	29550162	1328
ENSMUSG00000079580	protein_coding	Tmem217	ENSMUST00000234620	protein_coding		17	-1	29549596	813
ENSMUSG00000107504	protein_coding	Gm35549	ENSMUST00000207349	processed_transcript		9	-1	122843886	597
ENSMUSG00000079580	protein_coding	Tmem217	ENSMUST00000234648	protein_coding		17	-1	29549653	703
ENSMUSG00000079580	protein_coding	Tmem217	ENSMUST00000234979	protein_coding	principal1	17	-1	29549671	913
ENSMUSG00000015846	protein_coding	Rxra	ENSMUST00000129514	protein_coding		2	1	27676440	628
ENSMUSG00000033857	protein_coding	Engase	ENSMUST00000043447	nonsense_mediated_decay		11	1	118476972	2745
ENSMUSG00000001998	protein_coding	Ap4e1	ENSMUST00000175663	nonsense_mediated_decay		2	1	127008754	1493
ENSMUSG00000101096	unprocessed_pseudogene	Gm21524	ENSMUST00000190499	unprocessed_pseudogene		Y	-1	69983559	696
ENSMUSG00000020572	protein_coding	Nampt	ENSMUST00000220200	nonsense_mediated_decay		12	1	32819545	1024
ENSMUSG00000068327	protein_coding	Tlx2	ENSMUST00000174674	protein_coding		6	-1	83070225	1514
ENSMUSG00000079580	protein_coding	Tmem217	ENSMUST00000235062	protein_coding	principal1	17	-1	29552385	1104
ENSMUSG00000049728	protein_coding	Zfp668	ENSMUST00000106261	protein_coding	principal1	7	-1	127875646	2410
ENSMUSG00000035367	protein_coding	Rmi1	ENSMUST00000042450	protein_coding	principal1	13	1	58402263	3855
ENSMUSG00000107504	protein_coding	Gm35549	ENSMUST00000204619	protein_coding	principal1	9	-1	122844035	644
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000106023	protein_coding	alternative2	7	-1	141266421	2237
ENSMUSG00000107504	protein_coding	Gm35549	ENSMUST00000203656	protein_coding	principal1	9	-1	122844035	1009
ENSMUSG00000110344	protein_coding	Gm45716	ENSMUST00000124877	protein_coding	principal1	11	1	90187683	1256
ENSMUSG00000107504	protein_coding	Gm35549	ENSMUST00000203176	protein_coding	principal1	9	-1	122844035	735
ENSMUSG00000019139	protein_coding	Isyna1	ENSMUST00000210005	protein_coding	principal1	8	1	70594481	1914
ENSMUSG00000033857	protein_coding	Engase	ENSMUST00000139917	nonsense_mediated_decay		11	1	118476983	4303
ENSMUSG00000103287	TEC	1700034J04Rik	ENSMUST00000192736	TEC		12	-1	11222210	750
ENSMUSG00000049728	protein_coding	Zfp668	ENSMUST00000106262	protein_coding	principal1	7	-1	127876777	3169
ENSMUSG00000035367	protein_coding	Rmi1	ENSMUST00000225815	protein_coding	principal1	13	1	58402700	2447
ENSMUSG00000112102	lincRNA	Gm32105	ENSMUST00000218512	lincRNA		10	-1	13883293	511
ENSMUSG00000049728	protein_coding	Zfp668	ENSMUST00000144721	protein_coding		7	-1	127875657	626
ENSMUSG00000110344	protein_coding	Gm45716	ENSMUST00000153734	protein_coding	principal1	11	1	90187684	644
ENSMUSG00000001998	protein_coding	Ap4e1	ENSMUST00000177372	nonsense_mediated_decay		2	1	127008754	2272
ENSMUSG00000033857	protein_coding	Engase	ENSMUST00000139813	retained_intron		11	1	118481122	675
ENSMUSG00000079580	protein_coding	Tmem217	ENSMUST00000168339	protein_coding	principal1	17	-1	29549557	649
ENSMUSG00000110344	protein_coding	Gm45716	ENSMUST00000134929	protein_coding	principal1	11	1	90187684	2031
ENSMUSG00000035367	protein_coding	Rmi1	ENSMUST00000224758	processed_transcript		13	1	58402943	732
ENSMUSG00000049728	protein_coding	Zfp668	ENSMUST00000150961	processed_transcript		7	-1	127876134	328
ENSMUSG00000033857	protein_coding	Engase	ENSMUST00000168785	retained_intron		11	1	118482389	1915
ENSMUSG00000019139	protein_coding	Isyna1	ENSMUST00000210878	retained_intron		8	1	70594490	1916
ENSMUSG00000001998	protein_coding	Ap4e1	ENSMUST00000142740	nonsense_mediated_decay		2	1	127049311	659
ENSMUSG00000030804	protein_coding	Gm21974	ENSMUST00000126662	nonsense_mediated_decay	principal1	7	-1	127895454	2037
ENSMUSG00000068327	protein_coding	Tlx2	ENSMUST00000089641	protein_coding	principal1	6	-1	83070293	1236
ENSMUSG00000019139	protein_coding	Isyna1	ENSMUST00000211501	protein_coding		8	1	70594727	237
ENSMUSG00000035367	protein_coding	Rmi1	ENSMUST00000224479	protein_coding	principal1	13	1	58405066	4212
ENSMUSG00000112172	lincRNA	Gm32172	ENSMUST00000220029	lincRNA		10	1	13871280	633
ENSMUSG00000079580	protein_coding	Tmem217	ENSMUST00000234176	processed_transcript		17	-1	29549662	429
ENSMUSG00000033857	protein_coding	Engase	ENSMUST00000168689	protein_coding		11	1	118484490	1124
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000218787	protein_coding		10	1	78574476	746
ENSMUSG00000019139	protein_coding	Isyna1	ENSMUST00000209751	retained_intron		8	1	70595055	561
ENSMUSG00000114938	processed_pseudogene	Gm48134	ENSMUST00000224774	processed_pseudogene		14	1	42543472	233
ENSMUSG00000019139	protein_coding	Isyna1	ENSMUST00000211773	retained_intron		8	1	70595967	719
ENSMUSG00000109944	lincRNA	Gm32975	ENSMUST00000211651	lincRNA		8	1	51177683	584
ENSMUSG00000091788	unprocessed_pseudogene	Gm8032	ENSMUST00000171009	unprocessed_pseudogene		14	1	42557051	574
ENSMUSG00000019139	protein_coding	Isyna1	ENSMUST00000019283	protein_coding	principal1	8	1	70594481	1836
ENSMUSG00000090351	unprocessed_pseudogene	Gm17204	ENSMUST00000167936	unprocessed_pseudogene		14	-1	42585202	478
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000026571	protein_coding	principal3	7	-1	141266481	1916
ENSMUSG00000042672	protein_coding	Dcst1	ENSMUST00000070820	protein_coding	principal1	3	-1	89365253	2342
ENSMUSG00000096145	protein_coding	Vkorc1	ENSMUST00000033074	protein_coding	principal1	7	-1	127895617	748
ENSMUSG00000091140	protein_coding	Gm17124	ENSMUST00000168320	protein_coding	principal1	14	-1	42599882	1379
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000097952	protein_coding	alternative2	7	-1	141266423	1764
ENSMUSG00000020850	protein_coding	Prpf8	ENSMUST00000018449	protein_coding	principal1	11	1	75486816	7442
ENSMUSG00000096145	protein_coding	Vkorc1	ENSMUST00000206053	protein_coding		7	-1	127895251	606
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000210506	retained_intron		7	-1	141266423	3240
ENSMUSG00000096145	protein_coding	Vkorc1	ENSMUST00000119922	protein_coding		7	-1	127895309	387
ENSMUSG00000095113	protein_coding	Gm3633	ENSMUST00000100697	protein_coding		14	-1	42641917	1407
ENSMUSG00000049739	protein_coding	Zfp646	ENSMUST00000205364	retained_intron		7	1	127876221	2296
ENSMUSG00000095113	protein_coding	Gm3633	ENSMUST00000163102	protein_coding	principal1	14	-1	42639329	231
ENSMUSG00000049739	protein_coding	Zfp646	ENSMUST00000131000	protein_coding		7	1	127876796	2241
ENSMUSG00000053950	protein_coding	Adnp2	ENSMUST00000066743	protein_coding	principal1	18	-1	80151482	5012
ENSMUSG00000020850	protein_coding	Prpf8	ENSMUST00000102510	protein_coding	principal1	11	1	75486820	7249
ENSMUSG00000042672	protein_coding	Dcst1	ENSMUST00000139467	retained_intron		3	-1	89355546	2306
ENSMUSG00000003948	protein_coding	Mmd	ENSMUST00000107887	protein_coding		11	1	90249456	1654
ENSMUSG00000118373	lincRNA	Gm41787	ENSMUST00000237583	lincRNA		18	-1	80162562	1406
ENSMUSG00000093948	protein_coding	Gm10378	ENSMUST00000166527	protein_coding		14	1	42655939	1239
ENSMUSG00000042672	protein_coding	Dcst1	ENSMUST00000124766	processed_transcript		3	-1	89355516	530
ENSMUSG00000020850	protein_coding	Prpf8	ENSMUST00000131283	protein_coding		11	1	75486855	3371
ENSMUSG00000117904	processed_pseudogene	Gm7447	ENSMUST00000237659	processed_pseudogene		18	1	80162752	763
ENSMUSG00000093948	protein_coding	Gm10378	ENSMUST00000100696	protein_coding	principal1	14	1	42655938	429
ENSMUSG00000042672	protein_coding	Dcst1	ENSMUST00000200174	retained_intron		3	-1	89354898	1270
ENSMUSG00000090975	unprocessed_pseudogene	Gm17162	ENSMUST00000168538	unprocessed_pseudogene		14	-1	42687469	473
ENSMUSG00000091627	unprocessed_pseudogene	Gm5929	ENSMUST00000166883	unprocessed_pseudogene		14	-1	42699767	487
ENSMUSG00000020850	protein_coding	Prpf8	ENSMUST00000133995	retained_intron		11	1	75492246	721
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000155744	retained_intron		7	-1	141266422	1922
ENSMUSG00000049739	protein_coding	Zfp646	ENSMUST00000050383	protein_coding	principal1	7	1	127877701	6310
ENSMUSG00000090742	unprocessed_pseudogene	Gm3008	ENSMUST00000160566	unprocessed_pseudogene		14	1	42728272	571
ENSMUSG00000118244	processed_pseudogene	Gm46629	ENSMUST00000236227	processed_pseudogene		18	-1	80189070	303
ENSMUSG00000024018	protein_coding	Ccdc167	ENSMUST00000137079	nonsense_mediated_decay		17	-1	29717019	2971
ENSMUSG00000049739	protein_coding	Zfp646	ENSMUST00000206340	protein_coding		7	1	127879311	6682
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000209899	nonsense_mediated_decay		7	-1	141266019	1622
ENSMUSG00000118061	lincRNA	Rbfaos	ENSMUST00000236423	lincRNA		18	1	80186239	2708
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000123525	protein_coding		7	-1	141265292	751
ENSMUSG00000003948	protein_coding	Mmd	ENSMUST00000004050	protein_coding	principal1	11	1	90249476	2677
ENSMUSG00000040006	protein_coding	Ginm1	ENSMUST00000039763	protein_coding	principal3	10	-1	7780917	1557
ENSMUSG00000042672	protein_coding	Dcst1	ENSMUST00000128002	retained_intron		3	-1	89364262	822
ENSMUSG00000046603	protein_coding	Tcaim	ENSMUST00000052740	protein_coding	principal1	9	1	122805539	3049
ENSMUSG00000042672	protein_coding	Dcst1	ENSMUST00000127766	retained_intron		3	-1	89364263	598
ENSMUSG00000116092	sense_intronic	Gm49422	ENSMUST00000230699	sense_intronic		15	1	68959531	239
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000127223	retained_intron		7	-1	141265131	708
ENSMUSG00000020895	protein_coding	Tmem107	ENSMUST00000075980	protein_coding	principal1	11	1	69070806	779
ENSMUSG00000040006	protein_coding	Ginm1	ENSMUST00000133796	retained_intron		10	-1	7770551	831
ENSMUSG00000046603	protein_coding	Tcaim	ENSMUST00000149659	processed_transcript		9	1	122805561	377
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000131399	processed_transcript		7	-1	141266044	813
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000148414	retained_intron		7	-1	141265473	559
ENSMUSG00000020572	protein_coding	Nampt	ENSMUST00000020886	protein_coding	principal1	12	1	32820335	4527
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000156938	retained_intron		7	-1	141265707	740
ENSMUSG00000040006	protein_coding	Ginm1	ENSMUST00000124838	protein_coding	alternative2	10	-1	7780891	1525
ENSMUSG00000046603	protein_coding	Tcaim	ENSMUST00000136274	nonsense_mediated_decay		9	1	122805596	2909
ENSMUSG00000046603	protein_coding	Tcaim	ENSMUST00000213178	retained_intron		9	1	122805603	1580
ENSMUSG00000040006	protein_coding	Ginm1	ENSMUST00000124447	processed_transcript		10	-1	7792800	353
ENSMUSG00000109967	processed_transcript	Gm45883	ENSMUST00000210131	processed_transcript		11	1	90188108	853
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000127161	retained_intron		7	-1	141265984	687
ENSMUSG00000109967	processed_transcript	Gm45883	ENSMUST00000211334	processed_transcript		11	1	90188175	649
ENSMUSG00000040006	protein_coding	Ginm1	ENSMUST00000188270	processed_transcript		10	-1	7792824	1405
ENSMUSG00000025498	protein_coding	Irf7	ENSMUST00000146373	processed_transcript		7	-1	141266421	332
ENSMUSG00000040006	protein_coding	Ginm1	ENSMUST00000065124	protein_coding		10	-1	7792822	300
ENSMUSG00000114556	processed_pseudogene	Gm3895	ENSMUST00000223817	processed_pseudogene		14	-1	14259638	301
ENSMUSG00000020895	protein_coding	Tmem107	ENSMUST00000094081	protein_coding		11	1	69070811	1263
ENSMUSG00000081744	processed_pseudogene	Gm5721	ENSMUST00000119845	processed_pseudogene		6	1	16925231	1696
ENSMUSG00000020572	protein_coding	Nampt	ENSMUST00000218491	processed_transcript		12	1	32820801	411
ENSMUSG00000084772	lincRNA	Gm15473	ENSMUST00000140746	lincRNA		6	-1	17064996	1179
ENSMUSG00000024570	protein_coding	Rbfa	ENSMUST00000025462	protein_coding	principal1	18	-1	80200658	1377
ENSMUSG00000038119	protein_coding	Cdon	ENSMUST00000151682	protein_coding		9	1	35421128	652
ENSMUSG00000020895	protein_coding	Tmem107	ENSMUST00000123821	processed_transcript		11	1	69070813	582
ENSMUSG00000100928	lincRNA	Gm28487	ENSMUST00000187894	lincRNA		Y	1	31448706	1493
ENSMUSG00000025128	protein_coding	Bhlhe22	ENSMUST00000026120	protein_coding	principal1	3	1	18054174	3344
ENSMUSG00000038119	protein_coding	Cdon	ENSMUST00000137200	nonsense_mediated_decay		9	1	35421554	408
ENSMUSG00000020895	protein_coding	Tmem107	ENSMUST00000152142	processed_transcript		11	1	69070854	378
ENSMUSG00000020895	protein_coding	Tmem107	ENSMUST00000123038	processed_transcript		11	1	69070873	677
ENSMUSG00000024570	protein_coding	Rbfa	ENSMUST00000236460	processed_transcript		18	-1	80195203	477
ENSMUSG00000020895	protein_coding	Tmem107	ENSMUST00000128323	processed_transcript		11	1	69070918	463
ENSMUSG00000020895	protein_coding	Tmem107	ENSMUST00000146646	processed_transcript		11	1	69070936	367
ENSMUSG00000114768	lincRNA	Gm48857	ENSMUST00000224316	lincRNA		14	-1	14294676	986
ENSMUSG00000071654	protein_coding	Uqcc3	ENSMUST00000096253	protein_coding	principal1	19	-1	8880923	821
ENSMUSG00000114510	processed_pseudogene	Gm48859	ENSMUST00000224979	processed_pseudogene		14	-1	14303111	429
ENSMUSG00000100928	lincRNA	Gm28487	ENSMUST00000191522	lincRNA		Y	1	31449159	612
ENSMUSG00000100928	lincRNA	Gm28487	ENSMUST00000185292	lincRNA		Y	1	31449159	431
ENSMUSG00000030386	protein_coding	Zfp606	ENSMUST00000098822	protein_coding	principal1	7	1	12478293	4748
ENSMUSG00000024018	protein_coding	Ccdc167	ENSMUST00000129091	protein_coding		17	-1	29717009	7117
ENSMUSG00000020895	protein_coding	Tmem107	ENSMUST00000125215	processed_transcript		11	1	69071302	311
ENSMUSG00000112166	lincRNA	Gm47948	ENSMUST00000219636	lincRNA		12	1	32878305	1557
ENSMUSG00000110490	unprocessed_pseudogene	Vmn2r-ps91	ENSMUST00000213039	unprocessed_pseudogene		8	1	71877780	784
ENSMUSG00000094493	protein_coding	Olfr700	ENSMUST00000214840	protein_coding	principal1	7	-1	106808834	1505
ENSMUSG00000030386	protein_coding	Zfp606	ENSMUST00000123589	protein_coding		7	1	12478305	3509
ENSMUSG00000024018	protein_coding	Ccdc167	ENSMUST00000123502	nonsense_mediated_decay		17	-1	29716985	3090
ENSMUSG00000094493	protein_coding	Olfr700	ENSMUST00000079936	protein_coding	principal1	7	-1	106806460	951
ENSMUSG00000024018	protein_coding	Ccdc167	ENSMUST00000131807	nonsense_mediated_decay		17	-1	29716963	594
ENSMUSG00000030386	protein_coding	Zfp606	ENSMUST00000151933	nonsense_mediated_decay		7	1	12478363	4069
ENSMUSG00000109861	lincRNA	4930458B22Rik	ENSMUST00000209339	lincRNA		7	-1	106814102	754
ENSMUSG00000029780	protein_coding	Nt5c3	ENSMUST00000101367	protein_coding	alternative1	6	-1	56901886	1519
ENSMUSG00000047036	protein_coding	Zfp445	ENSMUST00000214626	protein_coding		9	-1	122862344	1220
ENSMUSG00000030386	protein_coding	Zfp606	ENSMUST00000133515	retained_intron		7	1	12489513	3477
ENSMUSG00000071253	protein_coding	Slc25a16	ENSMUST00000044977	protein_coding	principal1	10	1	62920633	3145
ENSMUSG00000082398	processed_pseudogene	Gm11927	ENSMUST00000118472	processed_pseudogene		4	1	32051738	759
ENSMUSG00000083872	processed_pseudogene	Gm11928	ENSMUST00000119323	processed_pseudogene		4	1	32149786	437
ENSMUSG00000029780	protein_coding	Nt5c3	ENSMUST00000031793	protein_coding	principal3	6	-1	56923932	1676
ENSMUSG00000098048	processed_pseudogene	Gm8330	ENSMUST00000182754	processed_pseudogene		10	-1	13891653	1008
ENSMUSG00000024018	protein_coding	Ccdc167	ENSMUST00000128751	protein_coding	principal1	17	-1	29717044	1397
ENSMUSG00000071253	protein_coding	Slc25a16	ENSMUST00000138597	retained_intron		10	1	62920667	1744
ENSMUSG00000086784	protein_coding	Isoc2a	ENSMUST00000125249	protein_coding	principal1	7	1	4877153	2244
ENSMUSG00000112494	TEC	4930444K16Rik	ENSMUST00000220438	TEC		10	-1	13928964	1767
ENSMUSG00000028646	protein_coding	Rragc	ENSMUST00000030399	protein_coding	principal1	4	1	123917446	2593
ENSMUSG00000024018	protein_coding	Ccdc167	ENSMUST00000234438	retained_intron		17	-1	29717008	1246
ENSMUSG00000071253	protein_coding	Slc25a16	ENSMUST00000144459	protein_coding		10	1	62920680	1038
ENSMUSG00000056019	protein_coding	Zfp709	ENSMUST00000188685	protein_coding	principal1	8	1	71882019	7186
ENSMUSG00000024018	protein_coding	Ccdc167	ENSMUST00000174437	processed_transcript		17	-1	29716964	215
ENSMUSG00000047036	protein_coding	Zfp445	ENSMUST00000216063	protein_coding	principal1	9	-1	122866006	6189
ENSMUSG00000071253	protein_coding	Slc25a16	ENSMUST00000152350	retained_intron		10	1	62942442	398
ENSMUSG00000100384	unprocessed_pseudogene	Gm28489	ENSMUST00000186655	unprocessed_pseudogene		Y	1	31464199	316
ENSMUSG00000080971	processed_pseudogene	Gm16128	ENSMUST00000117855	processed_pseudogene		10	1	62935698	626
ENSMUSG00000056019	protein_coding	Zfp709	ENSMUST00000188374	protein_coding		8	1	71882081	717
ENSMUSG00000084012	processed_pseudogene	Gm11956	ENSMUST00000119525	processed_pseudogene		11	-1	4231265	512
ENSMUSG00000047036	protein_coding	Zfp445	ENSMUST00000213971	protein_coding		9	-1	122857500	758
ENSMUSG00000109691	processed_pseudogene	Gm8679	ENSMUST00000210651	processed_pseudogene		8	1	51275890	1036
ENSMUSG00000056019	protein_coding	Zfp709	ENSMUST00000203585	processed_transcript		8	1	71882367	456
ENSMUSG00000100037	processed_transcript	Gm29103	ENSMUST00000191034	processed_transcript		1	1	131962954	598
ENSMUSG00000056019	protein_coding	Zfp709	ENSMUST00000034259	protein_coding		8	1	71887264	2181
ENSMUSG00000002820	protein_coding	Atg4d	ENSMUST00000065005	protein_coding	principal1	9	1	21265293	5951
ENSMUSG00000110221	protein_coding	Gm36210	ENSMUST00000210663	protein_coding	principal1	7	-1	4906516	1279
ENSMUSG00000084069	processed_pseudogene	Gm12306	ENSMUST00000117256	processed_pseudogene		11	1	69074490	171
ENSMUSG00000029780	protein_coding	Nt5c3	ENSMUST00000152447	nonsense_mediated_decay		6	-1	56923819	1067
ENSMUSG00000022999	protein_coding	Lmbr1l	ENSMUST00000023736	protein_coding	principal1	15	-1	98918231	2304
ENSMUSG00000027340	protein_coding	Slc23a2	ENSMUST00000028815	protein_coding	principal1	2	-1	132145108	6364
ENSMUSG00000047036	protein_coding	Zfp445	ENSMUST00000216243	retained_intron		9	-1	122855380	1064
ENSMUSG00000028646	protein_coding	Rragc	ENSMUST00000155757	nonsense_mediated_decay		4	1	123917474	2950
ENSMUSG00000029780	protein_coding	Nt5c3	ENSMUST00000135558	nonsense_mediated_decay		6	-1	56923876	1125
ENSMUSG00000029780	protein_coding	Nt5c3	ENSMUST00000205087	protein_coding		6	-1	56923724	427
ENSMUSG00000028646	protein_coding	Rragc	ENSMUST00000143635	processed_transcript		4	1	123919087	377
ENSMUSG00000047036	protein_coding	Zfp445	ENSMUST00000214162	retained_intron		9	-1	122857127	604
ENSMUSG00000027340	protein_coding	Slc23a2	ENSMUST00000148749	processed_transcript		2	-1	132056685	400
ENSMUSG00000029780	protein_coding	Nt5c3	ENSMUST00000126137	retained_intron		6	-1	56889863	576
ENSMUSG00000002820	protein_coding	Atg4d	ENSMUST00000216826	retained_intron		9	1	21265296	2123
ENSMUSG00000028646	protein_coding	Rragc	ENSMUST00000133445	retained_intron		4	1	123920907	642
ENSMUSG00000079091	protein_coding	Gm3404	ENSMUST00000110596	protein_coding	principal1	5	1	146525801	1130
ENSMUSG00000029780	protein_coding	Nt5c3	ENSMUST00000138647	processed_transcript		6	-1	56923890	387
ENSMUSG00000028646	protein_coding	Rragc	ENSMUST00000155454	processed_transcript		4	1	123921282	599
ENSMUSG00000002820	protein_coding	Atg4d	ENSMUST00000215767	retained_intron		9	1	21265306	1204
ENSMUSG00000027340	protein_coding	Slc23a2	ENSMUST00000137910	processed_transcript		2	-1	132067040	652
ENSMUSG00000047036	protein_coding	Zfp445	ENSMUST00000216721	protein_coding		9	-1	122865985	645
ENSMUSG00000047036	protein_coding	Zfp445	ENSMUST00000214558	protein_coding		9	-1	122865934	747
ENSMUSG00000002820	protein_coding	Atg4d	ENSMUST00000217269	nonsense_mediated_decay		9	1	21265524	445
ENSMUSG00000038119	protein_coding	Cdon	ENSMUST00000119129	protein_coding	principal1	9	1	35421558	7503
ENSMUSG00000071653	protein_coding	1810009A15Rik	ENSMUST00000096251	protein_coding	principal1	19	1	8888853	806
ENSMUSG00000029780	protein_coding	Nt5c3	ENSMUST00000134577	processed_transcript		6	-1	56923857	418
ENSMUSG00000002820	protein_coding	Atg4d	ENSMUST00000217591	retained_intron		9	1	21268078	697
ENSMUSG00000047036	protein_coding	Zfp445	ENSMUST00000056467	protein_coding	principal1	9	-1	122862128	2961
ENSMUSG00000044139	protein_coding	Prss53	ENSMUST00000121394	protein_coding	principal1	7	-1	127890970	2134
ENSMUSG00000029780	protein_coding	Nt5c3	ENSMUST00000127725	retained_intron		6	-1	56901883	2082
ENSMUSG00000038119	protein_coding	Cdon	ENSMUST00000154652	protein_coding		9	1	35423588	2222
ENSMUSG00000111325	sense_intronic	Gm47140	ENSMUST00000213573	sense_intronic		9	-1	122848418	1400
ENSMUSG00000113446	processed_pseudogene	Gm47455	ENSMUST00000222635	processed_pseudogene		13	1	45431002	330
ENSMUSG00000044139	protein_coding	Prss53	ENSMUST00000205300	protein_coding		7	-1	127890967	1662
ENSMUSG00000020184	protein_coding	Mdm2	ENSMUST00000020408	protein_coding	principal1	10	-1	117710758	3099
ENSMUSG00000038119	protein_coding	Cdon	ENSMUST00000127264	protein_coding		9	1	35457478	653
ENSMUSG00000027340	protein_coding	Slc23a2	ENSMUST00000127724	processed_transcript		2	-1	132145108	1638
ENSMUSG00000038119	protein_coding	Cdon	ENSMUST00000042842	protein_coding	principal1	9	1	35452076	7213
ENSMUSG00000020184	protein_coding	Mdm2	ENSMUST00000105263	protein_coding		10	-1	117710758	3145
ENSMUSG00000057788	protein_coding	Ddx49	ENSMUST00000008004	protein_coding	principal1	8	-1	70302489	2137
ENSMUSG00000117494	antisense	Gm49970	ENSMUST00000234213	antisense		18	1	12862429	2858
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000111398	protein_coding	alternative2	5	-1	125179219	8808
ENSMUSG00000027340	protein_coding	Slc23a2	ENSMUST00000154009	processed_transcript		2	-1	132078008	655
ENSMUSG00000096664	protein_coding	Gm3409	ENSMUST00000199142	protein_coding	alternative2	5	1	146537647	1167
ENSMUSG00000080866	processed_pseudogene	Gm5687	ENSMUST00000118252	processed_pseudogene		18	1	12898427	640
ENSMUSG00000116288	lincRNA	Gm41349	ENSMUST00000229255	lincRNA		15	1	76095575	1131
ENSMUSG00000096664	protein_coding	Gm3409	ENSMUST00000110599	protein_coding	principal2	5	1	146537648	1154
ENSMUSG00000027340	protein_coding	Slc23a2	ENSMUST00000133407	processed_transcript		2	-1	132094629	486
ENSMUSG00000021108	protein_coding	Prkch	ENSMUST00000221153	nonsense_mediated_decay		12	1	73584796	3634
ENSMUSG00000102852	lincRNA	Gm37083	ENSMUST00000195784	lincRNA		1	1	160798682	711
ENSMUSG00000027340	protein_coding	Slc23a2	ENSMUST00000128899	protein_coding		2	-1	132111448	379
ENSMUSG00000111063	transcribed_unprocessed_pseudogene	Zkscan7	ENSMUST00000214957	processed_transcript		9	1	122903246	5650
ENSMUSG00000111063	transcribed_unprocessed_pseudogene	Zkscan7	ENSMUST00000216462	transcribed_unprocessed_pseudogene		9	1	122908991	990
ENSMUSG00000096664	protein_coding	Gm3409	ENSMUST00000110597	protein_coding	alternative2	5	1	146537648	952
ENSMUSG00000022999	protein_coding	Lmbr1l	ENSMUST00000109127	processed_transcript		15	-1	98916212	2548
ENSMUSG00000103631	lincRNA	Gm38060	ENSMUST00000194822	lincRNA		1	1	160839168	464
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000111393	protein_coding		5	-1	125179180	8661
ENSMUSG00000022999	protein_coding	Lmbr1l	ENSMUST00000231087	retained_intron		15	-1	98906504	562
ENSMUSG00000020184	protein_coding	Mdm2	ENSMUST00000155285	nonsense_mediated_decay		10	-1	117710022	2769
ENSMUSG00000022332	protein_coding	Khdrbs3	ENSMUST00000022954	protein_coding	principal1	15	1	68928420	1887
ENSMUSG00000097322	processed_transcript	A530083I20Rik	ENSMUST00000180486	antisense		9	-1	122903184	2421
ENSMUSG00000022999	protein_coding	Lmbr1l	ENSMUST00000123950	retained_intron		15	-1	98908937	687
ENSMUSG00000071653	protein_coding	1810009A15Rik	ENSMUST00000186647	retained_intron		19	1	8888899	784
ENSMUSG00000097322	processed_transcript	A530083I20Rik	ENSMUST00000214426	antisense		9	-1	122903531	1855
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000086083	protein_coding	principal2	5	-1	125179053	8575
ENSMUSG00000071653	protein_coding	1810009A15Rik	ENSMUST00000185488	nonsense_mediated_decay		19	1	8888915	500
ENSMUSG00000022999	protein_coding	Lmbr1l	ENSMUST00000127548	retained_intron		15	-1	98909263	970
ENSMUSG00000097322	processed_transcript	A530083I20Rik	ENSMUST00000180877	antisense		9	-1	122903170	1022
ENSMUSG00000071653	protein_coding	1810009A15Rik	ENSMUST00000187037	retained_intron		19	1	8888929	793
ENSMUSG00000097322	processed_transcript	A530083I20Rik	ENSMUST00000216924	retained_intron		9	-1	122903146	4380
ENSMUSG00000022999	protein_coding	Lmbr1l	ENSMUST00000135051	retained_intron		15	-1	98909460	547
ENSMUSG00000022332	protein_coding	Khdrbs3	ENSMUST00000229683	nonsense_mediated_decay		15	1	68928432	1740
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000055256	protein_coding	alternative2	5	-1	125124900	7780
ENSMUSG00000071653	protein_coding	1810009A15Rik	ENSMUST00000190843	retained_intron		19	1	8888939	830
ENSMUSG00000022999	protein_coding	Lmbr1l	ENSMUST00000128818	retained_intron		15	-1	98918055	380
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000111394	protein_coding		5	-1	125179202	7452
ENSMUSG00000022332	protein_coding	Khdrbs3	ENSMUST00000230847	protein_coding		15	1	68928697	1344
ENSMUSG00000022999	protein_coding	Lmbr1l	ENSMUST00000126159	processed_transcript		15	-1	98917750	656
ENSMUSG00000057788	protein_coding	Ddx49	ENSMUST00000144890	retained_intron		8	-1	70302452	2163
ENSMUSG00000022332	protein_coding	Khdrbs3	ENSMUST00000229534	retained_intron		15	1	68928713	688
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000138890	protein_coding		5	-1	125025522	1285
ENSMUSG00000116347	protein_coding	Gm49416	ENSMUST00000191089	protein_coding	principal1	19	1	8888926	568
ENSMUSG00000022332	protein_coding	Khdrbs3	ENSMUST00000229234	nonsense_mediated_decay		15	1	68928721	2861
ENSMUSG00000057788	protein_coding	Ddx49	ENSMUST00000127094	retained_intron		8	-1	70295737	599
ENSMUSG00000115388	protein_coding	Eppk1	ENSMUST00000226781	protein_coding	principal1	15	-1	76120195	12332
ENSMUSG00000116347	protein_coding	Gm49416	ENSMUST00000188635	processed_transcript		19	1	8890529	802
ENSMUSG00000057788	protein_coding	Ddx49	ENSMUST00000138688	retained_intron		8	-1	70302463	1441
ENSMUSG00000026817	protein_coding	Ak1	ENSMUST00000113278	protein_coding	principal1	2	1	32621758	2085
ENSMUSG00000022332	protein_coding	Khdrbs3	ENSMUST00000230073	protein_coding		15	1	68930068	501
ENSMUSG00000063488	protein_coding	Zkscan7	ENSMUST00000215872	protein_coding		9	1	122885685	4035
ENSMUSG00000057788	protein_coding	Ddx49	ENSMUST00000127076	retained_intron		8	-1	70302434	304
ENSMUSG00000091741	unprocessed_pseudogene	Gm17161	ENSMUST00000169187	unprocessed_pseudogene		14	-1	42754334	524
ENSMUSG00000026817	protein_coding	Ak1	ENSMUST00000113277	protein_coding	principal1	2	1	32625437	2063
ENSMUSG00000071652	protein_coding	Ints5	ENSMUST00000096249	protein_coding	principal1	19	1	8893005	3274
ENSMUSG00000026817	protein_coding	Ak1	ENSMUST00000195721	protein_coding		2	1	32625438	421
ENSMUSG00000020184	protein_coding	Mdm2	ENSMUST00000132277	retained_intron		10	-1	117710685	3007
ENSMUSG00000026817	protein_coding	Ak1	ENSMUST00000156578	protein_coding		2	1	32628390	359
ENSMUSG00000007783	protein_coding	Cpt1c	ENSMUST00000211901	retained_intron		7	-1	44967731	2633
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000200297	nonsense_mediated_decay		5	-1	125025061	884
ENSMUSG00000020184	protein_coding	Mdm2	ENSMUST00000131627	retained_intron		10	-1	117691520	919
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000144354	retained_intron		5	-1	125023220	646
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000134819	protein_coding		5	-1	125026924	643
ENSMUSG00000015846	protein_coding	Rxra	ENSMUST00000077257	protein_coding	principal3	2	1	27677201	4905
ENSMUSG00000095466	protein_coding	Gm3015	ENSMUST00000169384	protein_coding		14	-1	42768821	1403
ENSMUSG00000020184	protein_coding	Mdm2	ENSMUST00000137102	processed_transcript		10	-1	117710078	683
ENSMUSG00000063488	protein_coding	Zkscan7	ENSMUST00000063980	protein_coding	principal1	9	1	122888471	4722
ENSMUSG00000020184	protein_coding	Mdm2	ENSMUST00000126022	processed_transcript		10	-1	117710711	570
ENSMUSG00000095466	protein_coding	Gm3015	ENSMUST00000179803	protein_coding	principal1	14	-1	42768802	624
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000130742	retained_intron		5	-1	125026087	683
ENSMUSG00000090333	unprocessed_pseudogene	Gm3025	ENSMUST00000163454	unprocessed_pseudogene		14	-1	42785217	489
ENSMUSG00000063488	protein_coding	Zkscan7	ENSMUST00000216429	processed_transcript		9	1	122897728	663
ENSMUSG00000015846	protein_coding	Rxra	ENSMUST00000100251	protein_coding	alternative1	2	1	27709292	1952
ENSMUSG00000020184	protein_coding	Mdm2	ENSMUST00000147823	processed_transcript		10	-1	117710292	499
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000134404	protein_coding		5	-1	125058400	3589
ENSMUSG00000111710	unprocessed_pseudogene	Gm47145	ENSMUST00000214983	unprocessed_pseudogene		9	1	122918533	2810
ENSMUSG00000015846	protein_coding	Rxra	ENSMUST00000113934	protein_coding	alternative1	2	1	27710583	1989
ENSMUSG00000026817	protein_coding	Ak1	ENSMUST00000068271	protein_coding		2	1	32629504	2034
ENSMUSG00000015846	protein_coding	Rxra	ENSMUST00000238859	protein_coding		2	1	27721151	1609
ENSMUSG00000028647	protein_coding	Mycbp	ENSMUST00000030400	protein_coding	principal1	4	1	123904832	1685
ENSMUSG00000020184	protein_coding	Mdm2	ENSMUST00000151725	retained_intron		10	-1	117710714	474
ENSMUSG00000015846	protein_coding	Rxra	ENSMUST00000238913	protein_coding		2	1	27725219	1631
ENSMUSG00000108357	processed_pseudogene	Snrp1c-ps1	ENSMUST00000205464	processed_pseudogene		7	1	126723936	474
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000149968	retained_intron		5	-1	125055988	1191
ENSMUSG00000027669	protein_coding	Gnb4	ENSMUST00000155737	protein_coding	principal1	3	-1	32616585	5997
ENSMUSG00000028647	protein_coding	Mycbp	ENSMUST00000106202	protein_coding		4	1	123904914	1536
ENSMUSG00000026817	protein_coding	Ak1	ENSMUST00000135392	retained_intron		2	1	32629521	752
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000199561	protein_coding		5	-1	125058411	832
ENSMUSG00000108382	lincRNA	4930448A20Rik	ENSMUST00000205988	lincRNA		7	1	126740629	1034
ENSMUSG00000092417	protein_coding	Gpank1	ENSMUST00000173380	protein_coding		17	1	35121455	577
ENSMUSG00000028647	protein_coding	Mycbp	ENSMUST00000147340	processed_transcript		4	1	123905041	210
ENSMUSG00000108554	processed_pseudogene	Gm44824	ENSMUST00000207021	processed_pseudogene		7	1	126742682	229
ENSMUSG00000029478	protein_coding	Ncor2	ENSMUST00000111402	protein_coding	alternative2	5	-1	125179214	8862
ENSMUSG00000095226	protein_coding	Gm10377	ENSMUST00000100695	protein_coding	principal1	14	-1	42797987	899
ENSMUSG00000028647	protein_coding	Mycbp	ENSMUST00000137685	processed_transcript		4	1	123905136	500
ENSMUSG00000015846	protein_coding	Rxra	ENSMUST00000148756	processed_transcript		2	1	27740201	673
ENSMUSG00000027669	protein_coding	Gnb4	ENSMUST00000108234	protein_coding	principal1	3	-1	32616517	2510
ENSMUSG00000108649	processed_pseudogene	Gm44855	ENSMUST00000205725	processed_pseudogene		7	1	126749555	362
ENSMUSG00000116702	processed_pseudogene	Gm6553	ENSMUST00000232495	processed_pseudogene		17	-1	7430242	956
ENSMUSG00000096740	protein_coding	Lbhd1	ENSMUST00000187504	protein_coding	principal1	19	1	8883732	3164
ENSMUSG00000085875	processed_transcript	Gm12905	ENSMUST00000153814	antisense		4	-1	123917269	658
ENSMUSG00000116585	lincRNA	Gm33086	ENSMUST00000232610	lincRNA		17	1	7576190	338
ENSMUSG00000060962	protein_coding	Dmkn	ENSMUST00000165887	protein_coding	alternative2	7	1	30763756	2063
ENSMUSG00000015846	protein_coding	Rxra	ENSMUST00000166775	protein_coding	principal3	2	1	27677262	3216
ENSMUSG00000043572	protein_coding	Pars2	ENSMUST00000106782	protein_coding		4	1	106651069	502
ENSMUSG00000116585	lincRNA	Gm33086	ENSMUST00000232428	lincRNA		17	1	7576260	257
ENSMUSG00000096740	protein_coding	Lbhd1	ENSMUST00000189165	retained_intron		19	1	8883924	399
ENSMUSG00000085875	processed_transcript	Gm12905	ENSMUST00000238344	retained_intron		4	-1	123918023	2706
ENSMUSG00000085875	processed_transcript	Gm12905	ENSMUST00000163208	processed_transcript		4	-1	123905508	279
ENSMUSG00000085875	processed_transcript	Gm12905	ENSMUST00000181410	processed_transcript		4	-1	123918022	519
ENSMUSG00000082515	processed_pseudogene	Gm12902	ENSMUST00000118389	processed_pseudogene		4	1	123926234	322
ENSMUSG00000096740	protein_coding	Lbhd1	ENSMUST00000190530	processed_transcript		19	1	8889278	387
ENSMUSG00000043572	protein_coding	Pars2	ENSMUST00000106781	protein_coding	alternative2	4	1	106651098	3046
ENSMUSG00000091264	protein_coding	Smim13	ENSMUST00000165561	protein_coding	principal1	13	1	41249844	4483
ENSMUSG00000092417	protein_coding	Gpank1	ENSMUST00000173043	protein_coding		17	1	35121482	676
ENSMUSG00000027669	protein_coding	Gnb4	ENSMUST00000152901	retained_intron		3	-1	32616525	2357
ENSMUSG00000043572	protein_coding	Pars2	ENSMUST00000146966	processed_transcript		4	1	106651103	644
ENSMUSG00000029552	protein_coding	Tes	ENSMUST00000115467	protein_coding	principal2	6	1	17065149	2440
ENSMUSG00000027669	protein_coding	Gnb4	ENSMUST00000184130	nonsense_mediated_decay		3	-1	32616522	1356
ENSMUSG00000035047	protein_coding	Kri1	ENSMUST00000038671	protein_coding	principal2	9	-1	21287969	2598
ENSMUSG00000029552	protein_coding	Tes	ENSMUST00000200690	retained_intron		6	1	17065160	3790
ENSMUSG00000027669	protein_coding	Gnb4	ENSMUST00000192116	retained_intron		3	-1	32598178	728
ENSMUSG00000029552	protein_coding	Tes	ENSMUST00000154266	protein_coding		6	1	17065168	527
ENSMUSG00000057895	protein_coding	Zfp105	ENSMUST00000051667	protein_coding	principal1	9	1	122923072	2010
ENSMUSG00000021108	protein_coding	Prkch	ENSMUST00000021527	protein_coding	principal1	12	1	73584797	3545
ENSMUSG00000027669	protein_coding	Gnb4	ENSMUST00000193050	protein_coding		3	-1	32616479	423
ENSMUSG00000060962	protein_coding	Dmkn	ENSMUST00000085691	protein_coding	principal4	7	1	30763763	2007
ENSMUSG00000092417	protein_coding	Gpank1	ENSMUST00000165306	protein_coding	alternative2	17	1	35121483	1518
ENSMUSG00000029552	protein_coding	Tes	ENSMUST00000121170	processed_transcript		6	1	17065192	647
ENSMUSG00000072235	protein_coding	Tuba1a	ENSMUST00000097014	protein_coding	principal1	15	-1	98953703	1803
ENSMUSG00000027669	protein_coding	Gnb4	ENSMUST00000144292	retained_intron		3	-1	32616525	4395
ENSMUSG00000057895	protein_coding	Zfp105	ENSMUST00000148851	protein_coding		9	1	122923099	753
ENSMUSG00000021108	protein_coding	Prkch	ENSMUST00000119092	processed_transcript		12	1	73584843	3055
ENSMUSG00000021108	protein_coding	Prkch	ENSMUST00000220898	retained_intron		12	1	73648921	2977
ENSMUSG00000116358	protein_coding	Gm49450	ENSMUST00000134214	protein_coding	principal1	15	-1	98953551	899
ENSMUSG00000092417	protein_coding	Gpank1	ENSMUST00000177018	processed_transcript		17	1	35121661	253
ENSMUSG00000003573	protein_coding	Homer3	ENSMUST00000087467	protein_coding		8	1	70282827	880
ENSMUSG00000110085	processed_pseudogene	Gm17911	ENSMUST00000210806	processed_pseudogene		8	1	51453395	877
ENSMUSG00000111428	transcribed_processed_pseudogene	Gm47146	ENSMUST00000214278	transcribed_processed_pseudogene		9	1	122942530	162
ENSMUSG00000043572	protein_coding	Pars2	ENSMUST00000058905	protein_coding	principal3	4	1	106651106	2191
ENSMUSG00000027669	protein_coding	Gnb4	ENSMUST00000143588	retained_intron		3	-1	32616529	2388
ENSMUSG00000111163	transcribed_unprocessed_pseudogene	Gm46136	ENSMUST00000217053	processed_transcript		9	1	122935812	6329
ENSMUSG00000029552	protein_coding	Tes	ENSMUST00000076654	protein_coding	alternative1	6	1	17065224	2685
ENSMUSG00000111163	transcribed_unprocessed_pseudogene	Gm46136	ENSMUST00000214730	transcribed_unprocessed_pseudogene		9	1	122938957	565
ENSMUSG00000116494	TEC	Gm49449	ENSMUST00000229079	TEC		15	1	98942550	1116
ENSMUSG00000014075	protein_coding	Tctex1d2	ENSMUST00000014220	protein_coding	principal1	16	1	32419702	838
ENSMUSG00000103189	TEC	Gm37092	ENSMUST00000193381	TEC		6	-1	83076116	1518
ENSMUSG00000060962	protein_coding	Dmkn	ENSMUST00000085688	protein_coding	alternative2	7	1	30763799	1926
ENSMUSG00000102862	antisense	Gm37640	ENSMUST00000195407	antisense		3	1	32610861	300
ENSMUSG00000054556	antisense	Gm4876	ENSMUST00000140709	antisense		6	-1	17171489	402
ENSMUSG00000109897	processed_pseudogene	Gm6458	ENSMUST00000211573	processed_pseudogene		8	1	51879563	635
ENSMUSG00000116728	processed_pseudogene	Gm41467	ENSMUST00000232076	processed_pseudogene		16	1	35891414	861
ENSMUSG00000110163	lincRNA	Gm45389	ENSMUST00000211163	lincRNA		8	-1	52031271	3399
ENSMUSG00000044361	protein_coding	BC024139	ENSMUST00000146157	nonsense_mediated_decay		15	-1	76126596	2973
ENSMUSG00000035047	protein_coding	Kri1	ENSMUST00000184326	protein_coding	alternative2	9	-1	21287953	2490
ENSMUSG00000109823	lincRNA	Gm45388	ENSMUST00000211101	lincRNA		8	1	52080163	815
ENSMUSG00000062279	processed_pseudogene	Gm10237	ENSMUST00000078393	processed_pseudogene		16	1	35920464	336
ENSMUSG00000109823	lincRNA	Gm45388	ENSMUST00000209922	lincRNA		8	1	52080405	1132
ENSMUSG00000054556	antisense	Gm4876	ENSMUST00000139701	antisense		6	-1	17171833	2225
ENSMUSG00000035047	protein_coding	Kri1	ENSMUST00000184410	retained_intron		9	-1	21275393	506
ENSMUSG00000014075	protein_coding	Tctex1d2	ENSMUST00000080316	protein_coding		16	1	32419746	720
ENSMUSG00000054556	antisense	Gm4876	ENSMUST00000136503	antisense		6	-1	17171465	424
ENSMUSG00000052825	processed_pseudogene	Gm9892	ENSMUST00000182415	processed_pseudogene		8	-1	52197056	992
ENSMUSG00000054556	antisense	Gm4876	ENSMUST00000150251	antisense		6	-1	17171617	454
ENSMUSG00000092417	protein_coding	Gpank1	ENSMUST00000052167	protein_coding	principal3	17	1	35122952	1295
ENSMUSG00000054556	antisense	Gm4876	ENSMUST00000138170	antisense		6	-1	17171746	390
ENSMUSG00000054556	antisense	Gm4876	ENSMUST00000166070	antisense		6	-1	17171810	422
ENSMUSG00000014075	protein_coding	Tctex1d2	ENSMUST00000131204	retained_intron		16	1	32419795	2158
ENSMUSG00000098231	processed_pseudogene	Gm6463	ENSMUST00000182090	processed_pseudogene		8	-1	52279471	966
ENSMUSG00000043311	protein_coding	D17H6S53E	ENSMUST00000174311	retained_intron		17	1	35126373	346
ENSMUSG00000116955	lincRNA	Gm49632	ENSMUST00000231693	lincRNA		17	1	7645328	624
ENSMUSG00000109441	lincRNA	Gm44983	ENSMUST00000208121	lincRNA		7	-1	4912357	463
ENSMUSG00000044361	protein_coding	BC024139	ENSMUST00000054022	protein_coding	principal2	15	-1	76126542	2623
ENSMUSG00000060962	protein_coding	Dmkn	ENSMUST00000188578	protein_coding		7	1	30765057	977
ENSMUSG00000021466	protein_coding	Ptch1	ENSMUST00000021921	protein_coding	principal2	13	-1	63565735	7725
ENSMUSG00000032551	protein_coding	1110059G10Rik	ENSMUST00000035154	protein_coding	principal1	9	-1	122951000	3361
ENSMUSG00000044361	protein_coding	BC024139	ENSMUST00000089654	protein_coding	alternative2	15	-1	76126556	2926
ENSMUSG00000035047	protein_coding	Kri1	ENSMUST00000183912	retained_intron		9	-1	21287969	2509
ENSMUSG00000108840	processed_pseudogene	Gm5320	ENSMUST00000207163	processed_pseudogene		7	1	4909038	1519
ENSMUSG00000044361	protein_coding	BC024139	ENSMUST00000126892	retained_intron		15	-1	76126071	2336
ENSMUSG00000032551	protein_coding	1110059G10Rik	ENSMUST00000118422	protein_coding		9	-1	122950953	723
ENSMUSG00000035047	protein_coding	Kri1	ENSMUST00000184615	retained_intron		9	-1	21287956	894
ENSMUSG00000044361	protein_coding	BC024139	ENSMUST00000226663	retained_intron		15	-1	76125339	633
ENSMUSG00000035047	protein_coding	Kri1	ENSMUST00000183503	retained_intron		9	-1	21287969	651
ENSMUSG00000032551	protein_coding	1110059G10Rik	ENSMUST00000215129	retained_intron		9	-1	122950976	2550
ENSMUSG00000035047	protein_coding	Kri1	ENSMUST00000183665	retained_intron		9	-1	21287956	345
ENSMUSG00000078688	protein_coding	Mup2	ENSMUST00000074700	protein_coding	principal1	4	-1	60139897	927
ENSMUSG00000099695	lincRNA	Gm28488	ENSMUST00000188792	lincRNA		Y	-1	31512658	1498
ENSMUSG00000043311	protein_coding	D17H6S53E	ENSMUST00000061859	protein_coding	principal1	17	1	35126386	2142
ENSMUSG00000057499	processed_pseudogene	Gm6177	ENSMUST00000085589	processed_pseudogene		1	1	160893120	465
ENSMUSG00000093884	protein_coding	Olfr239	ENSMUST00000214406	protein_coding	principal1	17	1	33191302	3773
ENSMUSG00000093884	protein_coding	Olfr239	ENSMUST00000213731	protein_coding		17	1	33191302	3690
ENSMUSG00000099695	lincRNA	Gm28488	ENSMUST00000186979	lincRNA		Y	-1	31512206	621
ENSMUSG00000099695	lincRNA	Gm28488	ENSMUST00000185608	lincRNA		Y	-1	31512206	437
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000027487	protein_coding	principal1	1	1	92910783	3337
ENSMUSG00000093884	protein_coding	Olfr239	ENSMUST00000112165	protein_coding	principal1	17	1	33199062	948
ENSMUSG00000021466	protein_coding	Ptch1	ENSMUST00000194663	nonsense_mediated_decay		13	-1	63573460	7657
ENSMUSG00000060962	protein_coding	Dmkn	ENSMUST00000041703	protein_coding	alternative2	7	1	30776401	662
ENSMUSG00000029193	protein_coding	Cckar	ENSMUST00000200691	protein_coding		5	-1	53707253	3230
ENSMUSG00000078688	protein_coding	Mup2	ENSMUST00000148940	processed_transcript		4	-1	60154289	817
ENSMUSG00000006488	protein_coding	Prl7a1	ENSMUST00000095924	protein_coding	alternative2	13	-1	27642464	928
ENSMUSG00000100399	lincRNA	Gm28491	ENSMUST00000186902	lincRNA		Y	-1	31541570	1493
ENSMUSG00000096169	protein_coding	Olfr1564	ENSMUST00000213751	protein_coding	alternative1	17	-1	33221652	5418
ENSMUSG00000096169	protein_coding	Olfr1564	ENSMUST00000208645	protein_coding	alternative1	17	-1	33221690	5213
ENSMUSG00000021466	protein_coding	Ptch1	ENSMUST00000195258	nonsense_mediated_decay		13	-1	63563815	10383
ENSMUSG00000078688	protein_coding	Mup2	ENSMUST00000107490	protein_coding	principal1	4	-1	60139857	761
ENSMUSG00000060962	protein_coding	Dmkn	ENSMUST00000054427	protein_coding	alternative2	7	1	30763763	2034
ENSMUSG00000096169	protein_coding	Olfr1564	ENSMUST00000213642	protein_coding	alternative1	17	-1	33221652	5271
ENSMUSG00000096169	protein_coding	Olfr1564	ENSMUST00000215450	protein_coding	alternative1	17	-1	33221672	5281
ENSMUSG00000100399	lincRNA	Gm28491	ENSMUST00000186753	lincRNA		Y	-1	31541117	431
ENSMUSG00000100399	lincRNA	Gm28491	ENSMUST00000190076	lincRNA		Y	-1	31541117	612
ENSMUSG00000096169	protein_coding	Olfr1564	ENSMUST00000112162	protein_coding	principal2	17	-1	33216351	1091
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000179854	retained_intron		1	1	92910825	4345
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000180306	retained_intron		1	1	92910853	2556
ENSMUSG00000015890	protein_coding	Amdhd1	ENSMUST00000016034	protein_coding	principal1	10	-1	93540033	2421
ENSMUSG00000004113	protein_coding	Cacna1b	ENSMUST00000070864	protein_coding	principal3	2	-1	24763152	9655
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000178116	nonsense_mediated_decay		1	1	92911121	790
ENSMUSG00000029193	protein_coding	Cckar	ENSMUST00000031093	protein_coding	principal1	5	-1	53707705	2930
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000124341	protein_coding	principal1	1	1	75546266	7182
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000179993	protein_coding		1	1	92911209	518
ENSMUSG00000003573	protein_coding	Homer3	ENSMUST00000140212	protein_coding	principal3	8	1	70282827	2608
ENSMUSG00000097907	antisense	Raxos1	ENSMUST00000181100	antisense		18	1	65937538	2547
ENSMUSG00000029193	protein_coding	Cckar	ENSMUST00000202946	processed_transcript		5	-1	53707560	424
ENSMUSG00000021466	protein_coding	Ptch1	ENSMUST00000192155	protein_coding	alternative2	13	-1	63564535	7002
ENSMUSG00000097907	antisense	Raxos1	ENSMUST00000235300	antisense		18	1	65937557	920
ENSMUSG00000094441	protein_coding	Zfp955a	ENSMUST00000008830	protein_coding	principal1	17	-1	33255145	3544
ENSMUSG00000021466	protein_coding	Ptch1	ENSMUST00000222040	processed_transcript		13	-1	63512029	539
ENSMUSG00000021466	protein_coding	Ptch1	ENSMUST00000223515	retained_intron		13	-1	63539678	2216
ENSMUSG00000024518	protein_coding	Rax	ENSMUST00000236247	retained_intron		18	-1	65939069	1871
ENSMUSG00000006488	protein_coding	Prl7a1	ENSMUST00000006659	protein_coding	principal3	13	-1	27642493	940
ENSMUSG00000021466	protein_coding	Ptch1	ENSMUST00000195756	protein_coding		13	-1	63564326	809
ENSMUSG00000023004	protein_coding	Tuba1b	ENSMUST00000077577	protein_coding	principal1	15	-1	98934565	1743
ENSMUSG00000003573	protein_coding	Homer3	ENSMUST00000155711	retained_intron		8	1	70283034	678
ENSMUSG00000021466	protein_coding	Ptch1	ENSMUST00000193953	protein_coding		13	-1	63565274	849
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000129703	retained_intron		1	1	75546296	469
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000178816	retained_intron		1	1	92915844	2504
ENSMUSG00000021466	protein_coding	Ptch1	ENSMUST00000195106	protein_coding		13	-1	63573598	1123
ENSMUSG00000024518	protein_coding	Rax	ENSMUST00000238035	protein_coding		18	-1	65939106	2323
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000107128	protein_coding		7	-1	98119524	7506
ENSMUSG00000006488	protein_coding	Prl7a1	ENSMUST00000224852	protein_coding		13	-1	27642493	1283
ENSMUSG00000023004	protein_coding	Tuba1b	ENSMUST00000140969	retained_intron		15	-1	98934438	526
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000150142	protein_coding		1	1	75546462	563
ENSMUSG00000021466	protein_coding	Ptch1	ENSMUST00000220588	retained_intron		13	-1	63545316	349
ENSMUSG00000102282	TEC	A930032L01Rik	ENSMUST00000195845	TEC		13	-1	63568054	957
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000179127	protein_coding		1	1	92916791	1844
ENSMUSG00000116223	antisense	Gm41396	ENSMUST00000229156	antisense		15	1	98934325	1345
ENSMUSG00000038725	protein_coding	Pkhd1l1	ENSMUST00000209244	protein_coding	principal1	15	1	44457553	12949
ENSMUSG00000116223	antisense	Gm41396	ENSMUST00000229635	antisense		15	1	98934647	339
ENSMUSG00000038725	protein_coding	Pkhd1l1	ENSMUST00000231867	retained_intron		15	1	44525419	6155
ENSMUSG00000003573	protein_coding	Homer3	ENSMUST00000003669	protein_coding	alternative1	8	1	70285246	2323
ENSMUSG00000038725	protein_coding	Pkhd1l1	ENSMUST00000209939	retained_intron		15	1	44591920	464
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000178662	retained_intron		1	1	92916805	822
ENSMUSG00000100341	lincRNA	Gm29478	ENSMUST00000191272	lincRNA		9	1	91404474	688
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000178361	retained_intron		1	1	92917012	418
ENSMUSG00000104216	TEC	Gm37987	ENSMUST00000194999	TEC		9	-1	91758146	825
ENSMUSG00000038725	protein_coding	Pkhd1l1	ENSMUST00000166957	protein_coding		15	1	44457553	12747
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000179837	protein_coding		1	1	92917147	400
ENSMUSG00000109896	lincRNA	Gm31409	ENSMUST00000209894	lincRNA		9	-1	91961118	710
ENSMUSG00000024518	protein_coding	Rax	ENSMUST00000025396	protein_coding	principal1	18	-1	65939089	1672
ENSMUSG00000038725	protein_coding	Pkhd1l1	ENSMUST00000038336	protein_coding		15	1	44457553	12741
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000178778	retained_intron		1	1	92917416	705
ENSMUSG00000026269	protein_coding	Rnpepl1	ENSMUST00000179531	nonsense_mediated_decay		1	1	92919614	4034
ENSMUSG00000024518	protein_coding	Rax	ENSMUST00000236444	retained_intron		18	-1	65937815	687
ENSMUSG00000024518	protein_coding	Rax	ENSMUST00000235720	nonsense_mediated_decay		18	-1	65938728	656
ENSMUSG00000024518	protein_coding	Rax	ENSMUST00000237710	retained_intron		18	-1	65939077	2856
ENSMUSG00000083487	processed_pseudogene	Gm13888	ENSMUST00000119148	processed_pseudogene		2	-1	105032287	422
ENSMUSG00000003573	protein_coding	Homer3	ENSMUST00000143528	retained_intron		8	1	70285931	852
ENSMUSG00000024518	protein_coding	Rax	ENSMUST00000237506	protein_coding		18	-1	65939787	909
ENSMUSG00000003573	protein_coding	Homer3	ENSMUST00000135692	retained_intron		8	1	70289174	805
ENSMUSG00000003573	protein_coding	Homer3	ENSMUST00000135368	protein_coding		8	1	70291076	583
ENSMUSG00000095654	protein_coding	Plscr5	ENSMUST00000179751	protein_coding	principal1	9	1	92192936	1191
ENSMUSG00000003573	protein_coding	Homer3	ENSMUST00000110124	protein_coding	alternative1	8	1	70282999	2445
ENSMUSG00000083512	processed_pseudogene	Gm12749	ENSMUST00000122138	processed_pseudogene		4	-1	109374859	1159
ENSMUSG00000038457	protein_coding	Tmem255b	ENSMUST00000211356	processed_transcript		8	1	13435189	746
ENSMUSG00000004113	protein_coding	Cacna1b	ENSMUST00000102939	protein_coding	alternative2	2	-1	24763129	9736
ENSMUSG00000004113	protein_coding	Cacna1b	ENSMUST00000131861	protein_coding		2	-1	24607534	523
ENSMUSG00000051008	lincRNA	4930412M03Rik	ENSMUST00000130746	lincRNA		11	-1	60115230	1111
ENSMUSG00000073889	protein_coding	Il11ra1	ENSMUST00000108041	protein_coding	principal1	4	1	41699989	1953
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000156992	nonsense_mediated_decay		7	-1	98069377	2853
ENSMUSG00000028602	protein_coding	Tnfrsf8	ENSMUST00000030339	protein_coding	principal1	4	-1	145315147	3414
ENSMUSG00000004113	protein_coding	Cacna1b	ENSMUST00000041342	protein_coding	alternative2	2	-1	24763047	6984
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000027415	nonsense_mediated_decay		1	1	75546496	3926
ENSMUSG00000073889	protein_coding	Il11ra1	ENSMUST00000098132	protein_coding	principal1	4	1	41760196	2009
ENSMUSG00000104235	TEC	Gm37589	ENSMUST00000193609	TEC		3	1	60535751	3994
ENSMUSG00000028602	protein_coding	Tnfrsf8	ENSMUST00000123027	nonsense_mediated_decay		4	-1	145315164	3243
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000084979	protein_coding		7	-1	98109248	6849
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000107122	protein_coding		7	-1	98109248	6867
ENSMUSG00000073889	protein_coding	Il11ra1	ENSMUST00000108040	protein_coding	principal1	4	1	41760454	1837
ENSMUSG00000004113	protein_coding	Cacna1b	ENSMUST00000114447	protein_coding	alternative2	2	-1	24763047	6987
ENSMUSG00000062115	protein_coding	Rai1	ENSMUST00000149770	processed_transcript		11	1	60105013	1823
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000205746	protein_coding		7	-1	98107147	6689
ENSMUSG00000093426	unprocessed_pseudogene	Vmn2r-ps123	ENSMUST00000176763	unprocessed_pseudogene		17	1	19838565	2410
ENSMUSG00000004113	protein_coding	Cacna1b	ENSMUST00000133892	protein_coding		2	-1	24618321	684
ENSMUSG00000062115	protein_coding	Rai1	ENSMUST00000132012	protein_coding		11	1	60105177	684
ENSMUSG00000093642	unprocessed_pseudogene	Vmn2r-ps124	ENSMUST00000176236	unprocessed_pseudogene		17	1	19937217	903
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000164950	protein_coding	principal1	16	1	17276077	1631
ENSMUSG00000062115	protein_coding	Rai1	ENSMUST00000090806	protein_coding		11	1	60140084	7217
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000107127	protein_coding	principal1	7	-1	98119503	6806
ENSMUSG00000093711	unprocessed_pseudogene	Vmn2r-ps125	ENSMUST00000176234	unprocessed_pseudogene		17	-1	19987798	931
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000195724	protein_coding		3	1	60472830	346
ENSMUSG00000073889	protein_coding	Il11ra1	ENSMUST00000146608	retained_intron		4	1	41760498	756
ENSMUSG00000073889	protein_coding	Il11ra1	ENSMUST00000140894	retained_intron		4	1	41760512	325
ENSMUSG00000062115	protein_coding	Rai1	ENSMUST00000156902	processed_transcript		11	1	60140259	708
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000124787	retained_intron		7	-1	98065202	838
ENSMUSG00000004113	protein_coding	Cacna1b	ENSMUST00000125798	nonsense_mediated_decay		2	-1	24637479	949
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000152975	processed_transcript		7	-1	98084719	347
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000238540	protein_coding		7	-1	98091128	299
ENSMUSG00000022663	protein_coding	Atg3	ENSMUST00000023343	protein_coding	principal1	16	1	45158785	2057
ENSMUSG00000004113	protein_coding	Cacna1b	ENSMUST00000155356	protein_coding		2	-1	24632024	332
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000145516	retained_intron		1	1	75546527	706
ENSMUSG00000004113	protein_coding	Cacna1b	ENSMUST00000124183	protein_coding		2	-1	24685868	308
ENSMUSG00000073889	protein_coding	Il11ra1	ENSMUST00000108042	protein_coding	principal1	4	1	41762309	1768
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000138814	protein_coding		1	1	75546533	422
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000132612	retained_intron		1	1	75546644	6227
ENSMUSG00000022663	protein_coding	Atg3	ENSMUST00000150390	retained_intron		16	1	45165883	2081
ENSMUSG00000004113	protein_coding	Cacna1b	ENSMUST00000100348	protein_coding	alternative2	2	-1	24763047	7182
ENSMUSG00000073889	protein_coding	Il11ra1	ENSMUST00000145445	retained_intron		4	1	41762395	2605
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000189794	retained_intron		1	1	75546656	568
ENSMUSG00000109545	lincRNA	Gm44788	ENSMUST00000207605	lincRNA		8	1	10065054	385
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000154101	protein_coding		1	1	75549599	921
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000153657	processed_transcript		7	-1	98112662	647
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000142257	retained_intron		1	1	75549768	810
ENSMUSG00000073889	protein_coding	Il11ra1	ENSMUST00000155538	retained_intron		4	1	41767799	848
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000145258	nonsense_mediated_decay		1	1	75550595	1850
ENSMUSG00000073889	protein_coding	Il11ra1	ENSMUST00000152748	retained_intron		4	1	41767934	438
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000155637	processed_transcript		7	-1	98103361	493
ENSMUSG00000006576	protein_coding	Slc4a3	ENSMUST00000132110	nonsense_mediated_decay		1	1	75551709	547
ENSMUSG00000073889	protein_coding	Il11ra1	ENSMUST00000142059	retained_intron		4	1	41768448	523
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000067886	protein_coding	principal4	5	-1	38480306	3602
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000149079	processed_transcript		7	-1	98103357	467
ENSMUSG00000017057	protein_coding	Il13ra1	ENSMUST00000033418	protein_coding	principal1	X	1	36112110	3712
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000138627	protein_coding		7	-1	98119493	679
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000238309	protein_coding		7	-1	98111563	368
ENSMUSG00000030761	protein_coding	Myo7a	ENSMUST00000131632	processed_transcript		7	-1	98119492	498
ENSMUSG00000029212	protein_coding	Gabrb1	ENSMUST00000199967	protein_coding		5	1	71658113	799
ENSMUSG00000039754	protein_coding	Alkbh4	ENSMUST00000136634	protein_coding		5	1	136136146	557
ENSMUSG00000020358	protein_coding	Hnrnpab	ENSMUST00000074669	protein_coding	principal3	11	-1	51606847	2370
ENSMUSG00000063681	protein_coding	Crb1	ENSMUST00000059825	protein_coding	principal2	1	-1	139377077	5901
ENSMUSG00000098590	protein_coding	Gm1113	ENSMUST00000183573	protein_coding	principal1	9	-1	35518269	2434
ENSMUSG00000038457	protein_coding	Tmem255b	ENSMUST00000167505	protein_coding	principal1	8	1	13435459	1219
ENSMUSG00000114883	antisense	Gm48860	ENSMUST00000224991	antisense		14	-1	14347264	1104
ENSMUSG00000063681	protein_coding	Crb1	ENSMUST00000199479	retained_intron		1	-1	139202286	4033
ENSMUSG00000105144	processed_pseudogene	Rpl21-ps11	ENSMUST00000077278	processed_pseudogene		3	-1	96666982	480
ENSMUSG00000020358	protein_coding	Hnrnpab	ENSMUST00000101249	protein_coding	alternative2	11	-1	51606847	2013
ENSMUSG00000019302	protein_coding	Atp6v0a1	ENSMUST00000044721	protein_coding	principal3	11	1	101009452	4008
ENSMUSG00000063681	protein_coding	Crb1	ENSMUST00000198445	protein_coding	alternative2	1	-1	139377100	6135
ENSMUSG00000039754	protein_coding	Alkbh4	ENSMUST00000041100	protein_coding	alternative2	5	1	136136154	1773
ENSMUSG00000063681	protein_coding	Crb1	ENSMUST00000199291	retained_intron		1	-1	139255762	3671
ENSMUSG00000038457	protein_coding	Tmem255b	ENSMUST00000167071	protein_coding		8	1	13435483	1138
ENSMUSG00000031645	protein_coding	F11	ENSMUST00000034064	protein_coding	principal1	8	-1	45262031	2240
ENSMUSG00000063681	protein_coding	Crb1	ENSMUST00000196402	protein_coding		1	-1	139377041	2711
ENSMUSG00000020358	protein_coding	Hnrnpab	ENSMUST00000109103	protein_coding	alternative2	11	-1	51606847	1437
ENSMUSG00000019302	protein_coding	Atp6v0a1	ENSMUST00000103110	protein_coding	alternative1	11	1	101009452	2716
ENSMUSG00000072707	protein_coding	Olfr31	ENSMUST00000206009	protein_coding	principal1	14	1	14322828	4017
ENSMUSG00000104071	TEC	Gm37028	ENSMUST00000194276	TEC		5	1	117872813	107
ENSMUSG00000072707	protein_coding	Olfr31	ENSMUST00000217035	protein_coding	principal1	14	1	14322896	4126
ENSMUSG00000062115	protein_coding	Rai1	ENSMUST00000102688	protein_coding	principal1	11	1	60175879	6921
ENSMUSG00000063681	protein_coding	Crb1	ENSMUST00000200340	nonsense_mediated_decay		1	-1	139328248	757
ENSMUSG00000019302	protein_coding	Atp6v0a1	ENSMUST00000092663	protein_coding	alternative1	11	1	101011821	3813
ENSMUSG00000039754	protein_coding	Alkbh4	ENSMUST00000125923	nonsense_mediated_decay		5	1	136136158	1040
ENSMUSG00000072707	protein_coding	Olfr31	ENSMUST00000100872	protein_coding	principal1	14	1	14328113	954
ENSMUSG00000063681	protein_coding	Crb1	ENSMUST00000197035	nonsense_mediated_decay		1	-1	139328268	636
ENSMUSG00000031645	protein_coding	F11	ENSMUST00000210622	processed_transcript		8	-1	45262031	614
ENSMUSG00000007783	protein_coding	Cpt1c	ENSMUST00000212836	protein_coding	principal1	7	-1	44974775	2716
ENSMUSG00000038457	protein_coding	Tmem255b	ENSMUST00000210804	nonsense_mediated_decay		8	1	13435500	977
ENSMUSG00000029361	protein_coding	Nos1	ENSMUST00000138579	protein_coding		5	1	117781032	735
ENSMUSG00000032369	protein_coding	Plscr1	ENSMUST00000093801	protein_coding	principal1	9	1	92249750	2302
ENSMUSG00000054666	protein_coding	Olfr63	ENSMUST00000215466	processed_transcript		17	1	33264676	4427
ENSMUSG00000038457	protein_coding	Tmem255b	ENSMUST00000209950	processed_transcript		8	1	13455478	571
ENSMUSG00000062115	protein_coding	Rai1	ENSMUST00000064190	protein_coding	principal1	11	1	60105013	7348
ENSMUSG00000054666	protein_coding	Olfr63	ENSMUST00000217023	protein_coding	principal1	17	1	33264676	7023
ENSMUSG00000032369	protein_coding	Plscr1	ENSMUST00000186364	protein_coding	principal1	9	1	92250342	1471
ENSMUSG00000029361	protein_coding	Nos1	ENSMUST00000124194	processed_transcript		5	1	117781055	641
ENSMUSG00000039754	protein_coding	Alkbh4	ENSMUST00000143229	protein_coding		5	1	136136202	641
ENSMUSG00000020821	protein_coding	Kif1c	ENSMUST00000152618	protein_coding		11	1	70700548	1943
ENSMUSG00000054666	protein_coding	Olfr63	ENSMUST00000067840	protein_coding	principal1	17	1	33268722	955
ENSMUSG00000062115	protein_coding	Rai1	ENSMUST00000171108	protein_coding	principal1	11	1	60140082	7125
ENSMUSG00000032369	protein_coding	Plscr1	ENSMUST00000187952	retained_intron		9	1	92266295	1090
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000129099	protein_coding	alternative2	5	-1	38491957	3462
ENSMUSG00000007783	protein_coding	Cpt1c	ENSMUST00000063761	protein_coding	principal1	7	-1	44974851	2793
ENSMUSG00000097587	processed_transcript	4930578M01Rik	ENSMUST00000230737	retained_intron		15	1	98983348	1060
ENSMUSG00000039754	protein_coding	Alkbh4	ENSMUST00000100568	protein_coding	principal3	5	1	136138781	1714
ENSMUSG00000024519	protein_coding	Cplx4	ENSMUST00000025397	protein_coding	principal1	18	-1	65970237	1815
ENSMUSG00000007783	protein_coding	Cpt1c	ENSMUST00000212217	retained_intron		7	-1	44961321	602
ENSMUSG00000007783	protein_coding	Cpt1c	ENSMUST00000212890	retained_intron		7	-1	44966187	3261
ENSMUSG00000024519	protein_coding	Cplx4	ENSMUST00000236894	retained_intron		18	-1	65967682	533
ENSMUSG00000007783	protein_coding	Cpt1c	ENSMUST00000211862	protein_coding		7	-1	44973077	600
ENSMUSG00000097587	processed_transcript	4930578M01Rik	ENSMUST00000230013	lincRNA		15	1	98983627	5157
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000005238	protein_coding		5	-1	38502152	3243
ENSMUSG00000007783	protein_coding	Cpt1c	ENSMUST00000212255	protein_coding		7	-1	44974778	628
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000126927	protein_coding		1	-1	132067911	2422
ENSMUSG00000097587	processed_transcript	4930578M01Rik	ENSMUST00000180490	lincRNA		15	1	98985894	978
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000163016	retained_intron		1	-1	132029033	814
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000232092	retained_intron		16	1	17276309	1627
ENSMUSG00000064081	processed_pseudogene	Gm8973	ENSMUST00000079818	processed_pseudogene		15	1	99006057	313
ENSMUSG00000029212	protein_coding	Gabrb1	ENSMUST00000031122	protein_coding	principal1	5	1	71699932	13737
ENSMUSG00000109111	antisense	6530437J22Rik	ENSMUST00000207515	antisense		7	1	44970429	773
ENSMUSG00000109111	antisense	6530437J22Rik	ENSMUST00000209089	antisense		7	1	44973580	420
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000122970	nonsense_mediated_decay		5	-1	38480158	2900
ENSMUSG00000082399	processed_pseudogene	Gm14036	ENSMUST00000118248	processed_pseudogene		2	1	134803949	480
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000155634	protein_coding	alternative2	5	-1	38503143	3164
ENSMUSG00000105489	antisense	Gm38562	ENSMUST00000199398	antisense		5	-1	71699824	1126
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000112370	protein_coding		1	-1	132067965	2565
ENSMUSG00000019302	protein_coding	Atp6v0a1	ENSMUST00000154896	processed_transcript		11	1	101009452	4162
ENSMUSG00000082705	processed_pseudogene	Gm15616	ENSMUST00000118662	processed_pseudogene		5	1	72047205	375
ENSMUSG00000019302	protein_coding	Atp6v0a1	ENSMUST00000151554	processed_transcript		11	1	101009452	828
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000232220	retained_intron		16	1	17276328	743
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000160656	protein_coding		1	-1	132067826	2899
ENSMUSG00000083718	transcribed_processed_pseudogene	Ccnb2-ps	ENSMUST00000170898	processed_transcript		8	-1	71918851	2296
ENSMUSG00000019302	protein_coding	Atp6v0a1	ENSMUST00000139619	protein_coding		11	1	101010657	373
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000232031	retained_intron		16	1	17276329	632
ENSMUSG00000083718	transcribed_processed_pseudogene	Ccnb2-ps	ENSMUST00000118290	transcribed_processed_pseudogene		8	-1	71917824	623
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000144548	protein_coding		1	-1	132067963	3288
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000143758	protein_coding		5	-1	38480131	1296
ENSMUSG00000030954	protein_coding	Gp2	ENSMUST00000207887	protein_coding	alternative2	7	-1	119459270	1853
ENSMUSG00000019302	protein_coding	Atp6v0a1	ENSMUST00000134919	processed_transcript		11	1	101021137	384
ENSMUSG00000031451	protein_coding	Gas6	ENSMUST00000033828	protein_coding	principal1	8	-1	13494490	2548
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000156272	protein_coding		5	-1	38480182	526
ENSMUSG00000028980	protein_coding	H6pd	ENSMUST00000084117	protein_coding	principal1	4	-1	150003130	4571
ENSMUSG00000019302	protein_coding	Atp6v0a1	ENSMUST00000127810	processed_transcript		11	1	101043815	504
ENSMUSG00000022195	protein_coding	6030458C11Rik	ENSMUST00000057256	protein_coding	principal1	15	-1	12824649	3966
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000146267	nonsense_mediated_decay		1	-1	132068062	3161
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000144290	processed_transcript		5	-1	38440829	770
ENSMUSG00000043091	protein_coding	Tuba1c	ENSMUST00000058914	protein_coding	principal1	15	1	99029891	1982
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000231646	retained_intron		16	1	17276342	739
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000046658	protein_coding		1	-1	132067933	3252
ENSMUSG00000019302	protein_coding	Atp6v0a1	ENSMUST00000139857	processed_transcript		11	1	101039846	844
ENSMUSG00000043091	protein_coding	Tuba1c	ENSMUST00000230447	retained_intron		15	1	99030321	781
ENSMUSG00000022195	protein_coding	6030458C11Rik	ENSMUST00000228177	protein_coding		15	-1	12824611	3156
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000147664	protein_coding		5	-1	38502079	652
ENSMUSG00000066880	protein_coding	Zfp617	ENSMUST00000131544	protein_coding		8	1	71908635	769
ENSMUSG00000022195	protein_coding	6030458C11Rik	ENSMUST00000227299	protein_coding		15	-1	12824630	3206
ENSMUSG00000028980	protein_coding	H6pd	ENSMUST00000030830	protein_coding		4	-1	150009023	4745
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000159038	protein_coding	principal2	1	-1	132067911	1957
ENSMUSG00000028980	protein_coding	H6pd	ENSMUST00000153394	protein_coding		4	-1	150001265	650
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000140462	processed_transcript		5	-1	38502161	776
ENSMUSG00000066880	protein_coding	Zfp617	ENSMUST00000119003	protein_coding	principal1	8	1	71922852	2920
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000078497	protein_coding	alternative2	7	1	142498836	1067
ENSMUSG00000022195	protein_coding	6030458C11Rik	ENSMUST00000227821	processed_transcript		15	-1	12817900	836
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000189227	processed_transcript		1	-1	132041916	238
ENSMUSG00000028980	protein_coding	H6pd	ENSMUST00000152907	processed_transcript		4	-1	150001290	392
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000156076	retained_intron		5	-1	38491930	427
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000112365	protein_coding	alternative2	1	-1	132067965	1536
ENSMUSG00000005107	protein_coding	Slc2a9	ENSMUST00000067872	protein_coding	alternative2	5	-1	38483385	3403
ENSMUSG00000019302	protein_coding	Atp6v0a1	ENSMUST00000168757	protein_coding	alternative1	11	1	101009487	3967
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000161864	protein_coding		1	-1	132067900	1285
ENSMUSG00000022195	protein_coding	6030458C11Rik	ENSMUST00000228888	retained_intron		15	-1	12824641	1971
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105953	protein_coding	alternative2	7	1	142498836	1049
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000159382	retained_intron		1	-1	132046559	337
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000231517	retained_intron		16	1	17276342	1721
ENSMUSG00000020359	protein_coding	Phykpl	ENSMUST00000101250	nonsense_mediated_decay		11	1	51584757	2225
ENSMUSG00000059149	protein_coding	Mfsd4a	ENSMUST00000162628	nonsense_mediated_decay		1	-1	132054177	310
ENSMUSG00000104883	IG_V_pseudogene	Igkv14-134-1	ENSMUST00000199111	IG_V_pseudogene		6	-1	67711628	331
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000232071	retained_intron		16	1	17276348	493
ENSMUSG00000030954	protein_coding	Gp2	ENSMUST00000033255	protein_coding	alternative2	7	-1	119459285	1993
ENSMUSG00000036580	protein_coding	Spg20	ENSMUST00000044116	protein_coding	principal3	3	1	55112108	3770
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000231638	retained_intron		16	1	17276348	830
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000231322	retained_intron		16	1	17276677	1503
ENSMUSG00000036580	protein_coding	Spg20	ENSMUST00000199416	retained_intron		3	1	55112113	3239
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000232520	retained_intron		16	1	17276860	710
ENSMUSG00000030954	protein_coding	Gp2	ENSMUST00000239424	protein_coding	principal2	7	-1	119459272	1978
ENSMUSG00000089857	protein_coding	Zfp882	ENSMUST00000110002	protein_coding	principal1	8	1	71908608	3152
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000232167	protein_coding		16	1	17276970	781
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000125649	processed_transcript		7	1	142498836	1011
ENSMUSG00000036580	protein_coding	Spg20	ENSMUST00000107971	protein_coding	alternative2	3	1	55112129	3567
ENSMUSG00000089857	protein_coding	Zfp882	ENSMUST00000125802	protein_coding		8	1	71908657	372
ENSMUSG00000090315	protein_coding	Vmn2r104	ENSMUST00000233647	processed_transcript		17	-1	20042618	3192
ENSMUSG00000090315	protein_coding	Vmn2r104	ENSMUST00000233932	retained_intron		17	-1	20048336	11594
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000231347	retained_intron		16	1	17277081	802
ENSMUSG00000089857	protein_coding	Zfp882	ENSMUST00000126607	protein_coding		8	1	71908905	631
ENSMUSG00000036580	protein_coding	Spg20	ENSMUST00000200658	retained_intron		3	1	55112138	2115
ENSMUSG00000074987	antisense	Wt1os	ENSMUST00000135153	antisense		2	-1	105089817	3119
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000232636	retained_intron		16	1	17277095	825
ENSMUSG00000053216	protein_coding	Btn2a2	ENSMUST00000041541	protein_coding		13	-1	23488840	2226
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000232364	protein_coding		16	1	17277552	369
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000105384	protein_coding	principal1	10	1	78574500	2329
ENSMUSG00000055692	protein_coding	Tmem191c	ENSMUST00000231334	retained_intron		16	1	17277601	706
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000108033	protein_coding	alternative2	4	-1	41770224	428
ENSMUSG00000074987	antisense	Wt1os	ENSMUST00000172701	antisense		2	-1	105126510	2960
ENSMUSG00000053216	protein_coding	Btn2a2	ENSMUST00000110433	protein_coding	principal2	13	-1	23488857	2370
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000179658	protein_coding	alternative2	7	1	142498836	1079
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000218875	protein_coding		10	1	78574587	3020
ENSMUSG00000116743	processed_transcript	Gm49573	ENSMUST00000232426	processed_transcript		16	1	17233601	717
ENSMUSG00000074987	antisense	Wt1os	ENSMUST00000174870	antisense		2	-1	105126403	957
ENSMUSG00000036580	protein_coding	Spg20	ENSMUST00000118118	protein_coding	principal3	3	1	55112166	3981
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000218763	protein_coding		10	1	78574969	228
ENSMUSG00000074987	antisense	Wt1os	ENSMUST00000099647	antisense		2	-1	105078107	213
ENSMUSG00000053216	protein_coding	Btn2a2	ENSMUST00000223877	protein_coding	alternative2	13	-1	23488830	2109
ENSMUSG00000090315	protein_coding	Vmn2r104	ENSMUST00000168050	protein_coding	principal1	17	-1	20048336	3721
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105954	protein_coding	alternative2	7	1	142498836	1052
ENSMUSG00000053216	protein_coding	Btn2a2	ENSMUST00000110432	protein_coding	principal2	13	-1	23488847	2089
ENSMUSG00000026436	protein_coding	Elk4	ENSMUST00000086556	protein_coding	principal1	1	1	132007607	4433
ENSMUSG00000036580	protein_coding	Spg20	ENSMUST00000117341	protein_coding		3	1	55112387	2957
ENSMUSG00000062284	processed_pseudogene	Gm6030	ENSMUST00000078768	processed_pseudogene		16	1	45205100	390
ENSMUSG00000113094	sense_intronic	Gm47447	ENSMUST00000220851	sense_intronic		12	-1	84216137	977
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000220430	protein_coding		10	1	78574991	2350
ENSMUSG00000113776	TEC	Gm19327	ENSMUST00000220651	TEC		12	-1	84187806	3271
ENSMUSG00000086665	lincRNA	Gm13067	ENSMUST00000134236	lincRNA		4	1	150049013	404
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105952	protein_coding	alternative2	7	1	142498836	1040
ENSMUSG00000036580	protein_coding	Spg20	ENSMUST00000149767	protein_coding		3	1	55112596	368
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000218885	protein_coding	principal1	10	1	78574994	2233
ENSMUSG00000036580	protein_coding	Spg20	ENSMUST00000146109	protein_coding		3	1	55116177	473
ENSMUSG00000102813	TEC	Gm37795	ENSMUST00000194216	TEC		4	1	150068539	2459
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105955	protein_coding	alternative2	7	1	142498836	1028
ENSMUSG00000026436	protein_coding	Elk4	ENSMUST00000027696	protein_coding	principal1	1	1	132007876	1586
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000218215	protein_coding		10	1	78574995	2331
ENSMUSG00000032372	protein_coding	Plscr2	ENSMUST00000034932	protein_coding	principal1	9	1	92275602	1874
ENSMUSG00000026436	protein_coding	Elk4	ENSMUST00000146188	processed_transcript		1	1	132008099	305
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000209807	retained_intron		7	1	142498846	340
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000218271	protein_coding		10	1	78575023	1606
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000151909	retained_intron		4	-1	41770269	614
ENSMUSG00000026436	protein_coding	Elk4	ENSMUST00000124579	processed_transcript		1	1	132008109	362
ENSMUSG00000026436	protein_coding	Elk4	ENSMUST00000146432	protein_coding		1	1	132008297	1556
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000219588	protein_coding		10	1	78576949	1952
ENSMUSG00000009863	protein_coding	Sdhb	ENSMUST00000010007	protein_coding	principal1	4	1	140961203	1142
ENSMUSG00000020359	protein_coding	Phykpl	ENSMUST00000167797	protein_coding	principal2	11	1	51584757	3116
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000218670	retained_intron		10	1	78583193	413
ENSMUSG00000032372	protein_coding	Plscr2	ENSMUST00000126911	protein_coding		9	1	92275746	892
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000108035	protein_coding	alternative2	4	-1	41771547	731
ENSMUSG00000032763	protein_coding	Ilvbl	ENSMUST00000219971	retained_intron		10	1	78583831	564
ENSMUSG00000026436	protein_coding	Elk4	ENSMUST00000147218	nonsense_mediated_decay		1	1	132017808	2107
ENSMUSG00000020359	protein_coding	Phykpl	ENSMUST00000020625	protein_coding	alternative2	11	1	51584789	1609
ENSMUSG00000032372	protein_coding	Plscr2	ENSMUST00000113044	protein_coding		9	1	92289572	1239
ENSMUSG00000026436	protein_coding	Elk4	ENSMUST00000131159	processed_transcript		1	1	132018443	268
ENSMUSG00000032372	protein_coding	Plscr2	ENSMUST00000156772	retained_intron		9	1	92290819	849
ENSMUSG00000108468	lincRNA	Gm30459	ENSMUST00000206203	lincRNA		7	1	74765987	1193
ENSMUSG00000029211	protein_coding	Gabra4	ENSMUST00000031121	protein_coding	principal2	5	-1	71658308	4108
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000138337	retained_intron		4	-1	41773537	552
ENSMUSG00000032372	protein_coding	Plscr2	ENSMUST00000180154	protein_coding	principal1	9	1	92275602	1900
ENSMUSG00000095312	protein_coding	Olfr382	ENSMUST00000092921	protein_coding	principal1	11	-1	73517197	939
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000136768	retained_intron		4	-1	41773601	556
ENSMUSG00000029211	protein_coding	Gabra4	ENSMUST00000199357	protein_coding	alternative2	5	-1	71657981	2407
ENSMUSG00000009863	protein_coding	Sdhb	ENSMUST00000129181	processed_transcript		4	1	140961401	1232
ENSMUSG00000101370	lincRNA	Gm29139	ENSMUST00000185794	lincRNA		9	-1	92305144	248
ENSMUSG00000020359	protein_coding	Phykpl	ENSMUST00000156128	retained_intron		11	1	51584803	3889
ENSMUSG00000039747	protein_coding	Orai2	ENSMUST00000041048	protein_coding	principal1	5	-1	136170713	3908
ENSMUSG00000091355	unprocessed_pseudogene	Gm17142	ENSMUST00000164933	unprocessed_pseudogene		12	-1	103716697	645
ENSMUSG00000009863	protein_coding	Sdhb	ENSMUST00000125780	processed_transcript		4	1	140961403	1065
ENSMUSG00000020359	protein_coding	Phykpl	ENSMUST00000164864	retained_intron		11	1	51584807	1877
ENSMUSG00000081961	unprocessed_pseudogene	Olfr383-ps1	ENSMUST00000118895	unprocessed_pseudogene		11	-1	73541353	935
ENSMUSG00000020359	protein_coding	Phykpl	ENSMUST00000109105	retained_intron		11	1	51584811	1724
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105958	protein_coding	alternative2	7	1	142498864	1050
ENSMUSG00000039747	protein_coding	Orai2	ENSMUST00000196454	protein_coding		5	-1	136170628	3990
ENSMUSG00000029211	protein_coding	Gabra4	ENSMUST00000197994	nonsense_mediated_decay		5	-1	71657890	1765
ENSMUSG00000020359	protein_coding	Phykpl	ENSMUST00000169823	retained_intron		11	1	51591447	510
ENSMUSG00000039747	protein_coding	Orai2	ENSMUST00000197052	protein_coding		5	-1	136170634	693
ENSMUSG00000108652	lincRNA	0610006L08Rik	ENSMUST00000206672	lincRNA		7	-1	74853813	803
ENSMUSG00000029211	protein_coding	Gabra4	ENSMUST00000198138	protein_coding		5	-1	71657875	440
ENSMUSG00000029211	protein_coding	Gabra4	ENSMUST00000199150	retained_intron		5	-1	71657820	2191
ENSMUSG00000080736	processed_pseudogene	Gm15617	ENSMUST00000118973	processed_pseudogene		5	-1	72033488	771
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000040717	protein_coding	principal1	9	1	122951046	4858
ENSMUSG00000020359	protein_coding	Phykpl	ENSMUST00000169995	retained_intron		11	1	51599267	829
ENSMUSG00000074139	protein_coding	1700057G04Rik	ENSMUST00000126606	processed_transcript		9	1	92309377	705
ENSMUSG00000039747	protein_coding	Orai2	ENSMUST00000198268	retained_intron		5	-1	136170633	2265
ENSMUSG00000108652	lincRNA	0610006L08Rik	ENSMUST00000205326	lincRNA		7	-1	74853810	1589
ENSMUSG00000062077	protein_coding	Trim54	ENSMUST00000013771	protein_coding	principal2	5	1	31116712	1434
ENSMUSG00000108642	processed_pseudogene	Gm44903	ENSMUST00000206840	processed_pseudogene		7	-1	74851398	130
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000195077	protein_coding		3	1	60473042	1553
ENSMUSG00000026435	protein_coding	Slc45a3	ENSMUST00000177943	protein_coding	principal1	1	1	131962967	3212
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000195832	retained_intron		3	1	60473068	2728
ENSMUSG00000022905	protein_coding	Kpna1	ENSMUST00000172991	retained_intron		16	1	35978750	667
ENSMUSG00000062077	protein_coding	Trim54	ENSMUST00000202769	protein_coding	alternative1	5	1	31116734	1408
ENSMUSG00000074139	protein_coding	1700057G04Rik	ENSMUST00000150594	protein_coding		9	1	92309377	398
ENSMUSG00000073840	unprocessed_pseudogene	Mup-ps2	ENSMUST00000142602	unprocessed_pseudogene		4	1	60155274	533
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105949	protein_coding	alternative2	7	1	142498872	955
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000128294	protein_coding		7	1	142501617	342
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000146804	protein_coding	alternative2	7	1	142501620	642
ENSMUSG00000026435	protein_coding	Slc45a3	ENSMUST00000027695	protein_coding	principal1	1	1	131970609	3340
ENSMUSG00000105555	TEC	Gm43856	ENSMUST00000197004	TEC		5	-1	104972063	369
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000213745	nonsense_mediated_decay		9	1	122951065	1494
ENSMUSG00000068758	protein_coding	Il3ra	ENSMUST00000090591	protein_coding	principal2	14	1	14346275	1614
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000204751	protein_coding	principal3	6	1	83914367	9033
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105942	protein_coding	alternative2	7	1	142501638	720
ENSMUSG00000026435	protein_coding	Slc45a3	ENSMUST00000190322	protein_coding		1	1	131976719	885
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105947	protein_coding	alternative2	7	1	142501638	780
ENSMUSG00000068758	protein_coding	Il3ra	ENSMUST00000224877	protein_coding	alternative2	14	1	14346418	1128
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105943	protein_coding	alternative2	7	1	142501638	720
ENSMUSG00000026435	protein_coding	Slc45a3	ENSMUST00000185387	processed_transcript		1	1	131978964	798
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105941	protein_coding	alternative2	7	1	142501638	747
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000204580	retained_intron		6	1	83914371	3300
ENSMUSG00000107265	antisense	Gm15469	ENSMUST00000201750	antisense		5	-1	31137344	961
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000204110	processed_transcript		6	1	83914371	374
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105946	protein_coding	alternative2	7	1	142501638	765
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000204202	protein_coding		6	1	83914373	2806
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105948	protein_coding	alternative2	7	1	142501638	753
ENSMUSG00000074139	protein_coding	1700057G04Rik	ENSMUST00000098477	protein_coding	principal1	9	1	92309377	1052
ENSMUSG00000068758	protein_coding	Il3ra	ENSMUST00000225775	protein_coding		14	1	14346430	677
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000203455	protein_coding		6	1	83914374	2991
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105945	protein_coding	principal3	7	1	142501638	747
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000214652	protein_coding		9	1	122951077	2293
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105944	protein_coding	alternative2	7	1	142501638	753
ENSMUSG00000042507	protein_coding	Elmsan1	ENSMUST00000110294	protein_coding	principal1	12	-1	84194015	7156
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000217401	protein_coding		9	1	122951079	417
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000216730	retained_intron		9	1	122951082	882
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000153262	retained_intron		7	1	142504023	635
ENSMUSG00000068758	protein_coding	Il3ra	ENSMUST00000225560	processed_transcript		14	1	14346440	506
ENSMUSG00000074139	protein_coding	1700057G04Rik	ENSMUST00000134712	processed_transcript		9	1	92309408	581
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000144259	retained_intron		7	1	142514130	471
ENSMUSG00000042507	protein_coding	Elmsan1	ENSMUST00000220974	protein_coding		12	-1	84218881	3565
ENSMUSG00000074139	protein_coding	1700057G04Rik	ENSMUST00000185580	protein_coding		9	1	92343505	842
ENSMUSG00000117592	antisense	Gm46603	ENSMUST00000234551	antisense		17	-1	29322417	2437
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000214921	retained_intron		9	1	122951086	1752
ENSMUSG00000044201	protein_coding	Cdc25c	ENSMUST00000060710	protein_coding	principal1	18	-1	34751533	1945
ENSMUSG00000068758	protein_coding	Il3ra	ENSMUST00000224163	protein_coding	principal2	14	1	14346592	2315
ENSMUSG00000042507	protein_coding	Elmsan1	ENSMUST00000137562	retained_intron		12	-1	84155232	425
ENSMUSG00000117592	antisense	Gm46603	ENSMUST00000234239	antisense		17	-1	29322549	930
ENSMUSG00000074139	protein_coding	1700057G04Rik	ENSMUST00000135182	nonsense_mediated_decay		9	1	92351085	700
ENSMUSG00000082623	processed_pseudogene	Gm15493	ENSMUST00000119461	processed_pseudogene		9	-1	92335079	528
ENSMUSG00000068758	protein_coding	Il3ra	ENSMUST00000223589	protein_coding		14	1	14347051	738
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000215176	retained_intron		9	1	122951095	1057
ENSMUSG00000068758	protein_coding	Il3ra	ENSMUST00000224415	retained_intron		14	1	14349621	717
ENSMUSG00000042507	protein_coding	Elmsan1	ENSMUST00000130038	retained_intron		12	-1	84160138	582
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000216388	protein_coding		9	1	122963528	703
ENSMUSG00000042507	protein_coding	Elmsan1	ENSMUST00000046266	protein_coding	principal1	12	-1	84218881	6848
ENSMUSG00000078518	protein_coding	Gm13030	ENSMUST00000105805	protein_coding	principal1	4	-1	138873964	655
ENSMUSG00000113052	antisense	Gm31513	ENSMUST00000223261	antisense		12	1	84195969	684
ENSMUSG00000044201	protein_coding	Cdc25c	ENSMUST00000237620	nonsense_mediated_decay		18	-1	34751508	2121
ENSMUSG00000044201	protein_coding	Cdc25c	ENSMUST00000237822	retained_intron		18	-1	34736981	2634
ENSMUSG00000044201	protein_coding	Cdc25c	ENSMUST00000236366	retained_intron		18	-1	34744063	784
ENSMUSG00000044201	protein_coding	Cdc25c	ENSMUST00000237204	retained_intron		18	-1	34749269	448
ENSMUSG00000009907	protein_coding	Vps4b	ENSMUST00000112736	protein_coding	principal1	1	-1	106796667	4539
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000214880	retained_intron		9	1	122979793	2341
ENSMUSG00000044201	protein_coding	Cdc25c	ENSMUST00000237034	processed_transcript		18	-1	34751524	362
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000169299	protein_coding	alternative2	7	1	142498843	1013
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000214183	processed_transcript		9	1	122981549	1039
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000074187	protein_coding	principal3	7	1	142498836	1007
ENSMUSG00000085016	lincRNA	Gm11335	ENSMUST00000148743	lincRNA		13	-1	23530943	1080
ENSMUSG00000071984	protein_coding	Fndc1	ENSMUST00000097425	protein_coding		17	-1	7804974	5845
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000217415	retained_intron		9	1	122986442	949
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105957	protein_coding	alternative2	7	1	142498843	1028
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000216491	retained_intron		9	1	122990507	2251
ENSMUSG00000097755	lincRNA	2010110K18Rik	ENSMUST00000181453	lincRNA		18	1	34751809	2398
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000180152	protein_coding	alternative2	7	1	142498843	1067
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000113835	protein_coding	alternative2	6	1	83914390	4356
ENSMUSG00000061723	protein_coding	Tnnt3	ENSMUST00000105950	protein_coding	alternative2	7	1	142498843	1037
ENSMUSG00000097755	lincRNA	2010110K18Rik	ENSMUST00000181641	lincRNA		18	1	34751912	678
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000214311	nonsense_mediated_decay		9	1	123009391	1546
ENSMUSG00000097755	lincRNA	2010110K18Rik	ENSMUST00000236940	lincRNA		18	1	34756001	490
ENSMUSG00000071984	protein_coding	Fndc1	ENSMUST00000239425	protein_coding	principal1	17	-1	7827302	6333
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000032088	protein_coding	alternative2	6	1	83914392	6199
ENSMUSG00000114148	lincRNA	Gm47701	ENSMUST00000220747	lincRNA		12	1	25064692	2787
ENSMUSG00000009907	protein_coding	Vps4b	ENSMUST00000094646	protein_coding	principal1	1	-1	106796728	4633
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000203534	retained_intron		6	1	83914395	1502
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000216048	nonsense_mediated_decay		9	1	123009913	843
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000203808	processed_transcript		6	1	83914397	384
ENSMUSG00000071984	protein_coding	Fndc1	ENSMUST00000097424	processed_transcript		17	-1	7761015	602
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000216062	protein_coding		9	1	123011650	669
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000203324	protein_coding	alternative2	6	1	83928855	3822
ENSMUSG00000071984	protein_coding	Fndc1	ENSMUST00000114579	retained_intron		17	-1	7767675	4054
ENSMUSG00000043795	protein_coding	Prr33	ENSMUST00000054910	protein_coding		7	-1	142506771	2251
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000203891	protein_coding	alternative2	6	1	83928855	3968
ENSMUSG00000071984	protein_coding	Fndc1	ENSMUST00000167580	protein_coding		17	-1	7827302	636
ENSMUSG00000009907	protein_coding	Vps4b	ENSMUST00000147705	retained_intron		1	-1	106782794	709
ENSMUSG00000039519	protein_coding	Cyp7b1	ENSMUST00000035625	protein_coding	principal1	3	-1	18243338	2166
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000213945	retained_intron		9	1	123013711	358
ENSMUSG00000009907	protein_coding	Vps4b	ENSMUST00000190531	retained_intron		1	-1	106780624	791
ENSMUSG00000043795	protein_coding	Prr33	ENSMUST00000238347	protein_coding	principal1	7	-1	142496991	1447
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000204713	retained_intron		6	1	83942640	609
ENSMUSG00000036768	protein_coding	Kif15	ENSMUST00000217612	retained_intron		9	1	123017418	752
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000205166	protein_coding		6	1	83947898	798
ENSMUSG00000111617	TEC	Gm47148	ENSMUST00000217243	TEC		9	1	122993127	578
ENSMUSG00000060981	protein_coding	H4c8	ENSMUST00000102972	protein_coding	principal1	13	1	23531050	470
ENSMUSG00000116960	processed_pseudogene	Gm49679	ENSMUST00000231864	processed_pseudogene		16	1	30452588	311
ENSMUSG00000009907	protein_coding	Vps4b	ENSMUST00000127606	processed_transcript		1	-1	106789949	314
ENSMUSG00000024454	protein_coding	Hdac3	ENSMUST00000143660	retained_intron		18	-1	37945564	3585
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000203481	retained_intron		6	1	83962047	591
ENSMUSG00000043795	protein_coding	Prr33	ENSMUST00000151580	protein_coding		7	-1	142506498	399
ENSMUSG00000009907	protein_coding	Vps4b	ENSMUST00000126057	retained_intron		1	-1	106796577	847
ENSMUSG00000104801	TEC	Gm43834	ENSMUST00000197097	TEC		3	1	18299310	4830
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000204120	retained_intron		6	1	83965590	636
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000203056	retained_intron		6	1	83979610	454
ENSMUSG00000094347	protein_coding	Olfr784	ENSMUST00000214064	protein_coding	principal1	10	1	129384083	3119
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000108036	protein_coding	alternative2	4	-1	41774097	841
ENSMUSG00000094347	protein_coding	Olfr784	ENSMUST00000082342	protein_coding	principal1	10	1	129387635	960
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000151142	nonsense_mediated_decay		4	-1	41774100	822
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000203806	retained_intron		6	1	83983602	2270
ENSMUSG00000111732	protein_coding	Olfr785	ENSMUST00000204402	protein_coding	principal1	10	1	129405426	2014
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000204378	retained_intron		6	1	83983602	904
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000204823	retained_intron		6	1	83984354	602
ENSMUSG00000030016	protein_coding	Zfp638	ENSMUST00000113836	protein_coding	alternative2	6	1	83914390	4366
ENSMUSG00000024454	protein_coding	Hdac3	ENSMUST00000144471	retained_intron		18	-1	37944075	1811
ENSMUSG00000029299	protein_coding	Abcg3	ENSMUST00000031239	protein_coding	principal1	5	-1	104982718	3035
ENSMUSG00000108750	TEC	Gm44750	ENSMUST00000206185	TEC		6	1	83870065	2223
ENSMUSG00000029299	protein_coding	Abcg3	ENSMUST00000130644	protein_coding		5	-1	104977834	2668
ENSMUSG00000020894	protein_coding	Vamp2	ENSMUST00000021273	protein_coding	principal1	11	1	69088490	2205
ENSMUSG00000095095	protein_coding	Olfr385	ENSMUST00000215689	protein_coding	principal1	11	-1	73593008	1671
ENSMUSG00000095095	protein_coding	Olfr385	ENSMUST00000071553	protein_coding	principal1	11	-1	73589736	939
ENSMUSG00000020894	protein_coding	Vamp2	ENSMUST00000117780	protein_coding		11	1	69088510	1113
ENSMUSG00000020894	protein_coding	Vamp2	ENSMUST00000149780	retained_intron		11	1	69088522	676
ENSMUSG00000047635	protein_coding	2810006K23Rik	ENSMUST00000111477	protein_coding		5	1	124328089	1637
ENSMUSG00000020894	protein_coding	Vamp2	ENSMUST00000149559	processed_transcript		11	1	69088543	918
ENSMUSG00000020894	protein_coding	Vamp2	ENSMUST00000146847	retained_intron		11	1	69089606	485
ENSMUSG00000022905	protein_coding	Kpna1	ENSMUST00000004054	protein_coding	principal1	16	1	35983315	5039
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000108037	protein_coding	alternative2	4	-1	41774142	590
ENSMUSG00000063065	protein_coding	Mapk3	ENSMUST00000050201	protein_coding	alternative2	7	1	126759601	1267
ENSMUSG00000052955	protein_coding	Cpvl	ENSMUST00000203101	protein_coding		6	-1	53978671	1488
ENSMUSG00000022905	protein_coding	Kpna1	ENSMUST00000173715	retained_intron		16	1	35983325	2664
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000155322	nonsense_mediated_decay		4	-1	41774170	460
ENSMUSG00000022905	protein_coding	Kpna1	ENSMUST00000174500	nonsense_mediated_decay		16	1	35983354	780
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000131349	nonsense_mediated_decay		4	-1	41773937	489
ENSMUSG00000022905	protein_coding	Kpna1	ENSMUST00000173555	protein_coding		16	1	35983582	442
ENSMUSG00000107262	processed_pseudogene	Gm18753	ENSMUST00000201000	processed_pseudogene		5	1	150446782	566
ENSMUSG00000049878	protein_coding	Rlf	ENSMUST00000056635	protein_coding	principal2	4	-1	121215084	6242
ENSMUSG00000107082	processed_pseudogene	Gm36378	ENSMUST00000201709	processed_pseudogene		5	1	150243863	388
ENSMUSG00000086001	processed_transcript	Gm13448	ENSMUST00000143469	processed_transcript		2	1	34912871	1847
ENSMUSG00000118543	unprocessed_pseudogene	AC154885.1	ENSMUST00000239092	unprocessed_pseudogene		5	-1	150442304	240
ENSMUSG00000049878	protein_coding	Rlf	ENSMUST00000142647	retained_intron		4	-1	121188534	497
ENSMUSG00000049878	protein_coding	Rlf	ENSMUST00000222814	retained_intron		4	-1	121215084	2752
ENSMUSG00000049878	protein_coding	Rlf	ENSMUST00000168615	protein_coding	alternative2	4	-1	121188534	6585
ENSMUSG00000108716	processed_pseudogene	Gm44902	ENSMUST00000206177	processed_pseudogene		7	1	74886264	805
ENSMUSG00000029361	protein_coding	Nos1	ENSMUST00000142742	protein_coding	principal2	5	1	117841850	10123
ENSMUSG00000047635	protein_coding	2810006K23Rik	ENSMUST00000077376	protein_coding	principal1	5	1	124328098	1677
ENSMUSG00000060335	protein_coding	Olfr384	ENSMUST00000214228	protein_coding	principal1	11	1	73598594	2576
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000144090	retained_intron		4	-1	41774101	996
ENSMUSG00000052955	protein_coding	Cpvl	ENSMUST00000204674	protein_coding	principal1	6	-1	53978662	1511
ENSMUSG00000060335	protein_coding	Olfr384	ENSMUST00000072993	protein_coding	principal1	11	1	73602582	939
ENSMUSG00000063065	protein_coding	Mapk3	ENSMUST00000057669	protein_coding	principal2	7	1	126759601	1800
ENSMUSG00000026841	protein_coding	Fibcd1	ENSMUST00000028188	protein_coding	principal1	2	-1	31846005	4751
ENSMUSG00000105382	TEC	Gm43339	ENSMUST00000200032	TEC		5	-1	124279912	1606
ENSMUSG00000029361	protein_coding	Nos1	ENSMUST00000086451	nonsense_mediated_decay		5	1	117842186	5600
ENSMUSG00000115882	processed_pseudogene	Gm5481	ENSMUST00000231183	processed_pseudogene		16	1	16275603	345
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000140497	nonsense_mediated_decay		9	-1	123113147	5380
ENSMUSG00000082338	unprocessed_pseudogene	Gm12327	ENSMUST00000121729	unprocessed_pseudogene		11	1	73641786	1168
ENSMUSG00000063065	protein_coding	Mapk3	ENSMUST00000205657	protein_coding	alternative2	7	1	126759651	1005
ENSMUSG00000029361	protein_coding	Nos1	ENSMUST00000102557	protein_coding	alternative2	5	1	117867114	4591
ENSMUSG00000052955	protein_coding	Cpvl	ENSMUST00000166545	protein_coding	principal1	6	-1	53978662	1597
ENSMUSG00000080706	processed_pseudogene	Gm12890	ENSMUST00000120885	processed_pseudogene		4	-1	121227473	373
ENSMUSG00000063065	protein_coding	Mapk3	ENSMUST00000206875	retained_intron		7	1	126759660	436
ENSMUSG00000029361	protein_coding	Nos1	ENSMUST00000138554	processed_transcript		5	1	117919175	631
ENSMUSG00000063065	protein_coding	Mapk3	ENSMUST00000145965	processed_transcript		7	1	126759834	337
ENSMUSG00000029361	protein_coding	Nos1	ENSMUST00000171055	protein_coding	principal2	5	1	117867119	4388
ENSMUSG00000020149	protein_coding	Rab1a	ENSMUST00000020358	protein_coding	alternative1	11	1	20201432	2827
ENSMUSG00000063065	protein_coding	Mapk3	ENSMUST00000091328	protein_coding		7	1	126760597	1716
ENSMUSG00000079055	protein_coding	Slc8a3	ENSMUST00000085238	protein_coding	alternative1	12	-1	81333164	4927
ENSMUSG00000063065	protein_coding	Mapk3	ENSMUST00000206272	protein_coding		7	1	126760749	641
ENSMUSG00000020149	protein_coding	Rab1a	ENSMUST00000109602	protein_coding		11	1	20201435	2626
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000133572	retained_intron		4	-1	41774199	798
ENSMUSG00000063065	protein_coding	Mapk3	ENSMUST00000135649	retained_intron		7	1	126763277	480
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000200960	protein_coding		5	1	150118645	687
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000133556	retained_intron		4	-1	41774197	453
ENSMUSG00000108803	lincRNA	4930533N22Rik	ENSMUST00000206433	lincRNA		7	1	75030194	3509
ENSMUSG00000029722	protein_coding	Agfg2	ENSMUST00000031736	protein_coding	principal3	5	-1	137684726	2893
ENSMUSG00000098072	antisense	Gm26995	ENSMUST00000182216	antisense		5	-1	117939518	1306
ENSMUSG00000108803	lincRNA	4930533N22Rik	ENSMUST00000206684	lincRNA		7	1	75030233	1503
ENSMUSG00000079055	protein_coding	Slc8a3	ENSMUST00000064594	protein_coding	alternative1	12	-1	81332959	4379
ENSMUSG00000020149	protein_coding	Rab1a	ENSMUST00000132285	processed_transcript		11	1	20201439	962
ENSMUSG00000024011	protein_coding	Pi16	ENSMUST00000234782	protein_coding	alternative2	17	1	29317680	3288
ENSMUSG00000078687	protein_coding	Mup8	ENSMUST00000095058	protein_coding	principal2	4	-1	60222580	925
ENSMUSG00000020149	protein_coding	Rab1a	ENSMUST00000109601	protein_coding		11	1	20201439	1200
ENSMUSG00000024387	protein_coding	Csnk2b	ENSMUST00000173114	protein_coding	principal1	17	-1	35121429	917
ENSMUSG00000061246	polymorphic_pseudogene	Olfr387-ps1	ENSMUST00000134773	polymorphic_pseudogene	principal1	11	1	73660049	1513
ENSMUSG00000029722	protein_coding	Agfg2	ENSMUST00000100544	protein_coding	alternative2	5	-1	137684680	2858
ENSMUSG00000020821	protein_coding	Kif1c	ENSMUST00000102554	protein_coding	principal2	11	1	70700548	6684
ENSMUSG00000020149	protein_coding	Rab1a	ENSMUST00000152728	processed_transcript		11	1	20201609	702
ENSMUSG00000078687	protein_coding	Mup8	ENSMUST00000163931	protein_coding	alternative2	4	-1	60222599	986
ENSMUSG00000042063	protein_coding	Zfp386	ENSMUST00000073551	protein_coding	alternative2	12	1	116047724	1958
ENSMUSG00000020149	protein_coding	Rab1a	ENSMUST00000163483	protein_coding	principal2	11	1	20201602	2657
ENSMUSG00000042063	protein_coding	Zfp386	ENSMUST00000182566	retained_intron		12	1	116047764	498
ENSMUSG00000100632	antisense	9430060I03Rik	ENSMUST00000191563	antisense		1	-1	92950590	1689
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000134660	protein_coding		11	-1	60207188	4063
ENSMUSG00000095455	unprocessed_pseudogene	Mup-ps3	ENSMUST00000178315	unprocessed_pseudogene		4	1	60237345	545
ENSMUSG00000029722	protein_coding	Agfg2	ENSMUST00000147518	retained_intron		5	-1	137661762	1863
ENSMUSG00000060131	protein_coding	Atp8b4	ENSMUST00000040128	protein_coding	principal1	2	-1	126499847	5693
ENSMUSG00000029722	protein_coding	Agfg2	ENSMUST00000151839	protein_coding		5	-1	137684726	1365
ENSMUSG00000073764	protein_coding	Gm12888	ENSMUST00000097905	protein_coding	principal1	4	-1	121324917	1181
ENSMUSG00000079055	protein_coding	Slc8a3	ENSMUST00000182208	protein_coding	principal3	12	-1	81333180	3433
ENSMUSG00000024387	protein_coding	Csnk2b	ENSMUST00000174779	protein_coding		17	-1	35119775	632
ENSMUSG00000029722	protein_coding	Agfg2	ENSMUST00000198657	protein_coding		5	-1	137664316	343
ENSMUSG00000020821	protein_coding	Kif1c	ENSMUST00000094499	protein_coding	principal2	11	1	70700561	5168
ENSMUSG00000061991	protein_coding	H2ac10	ENSMUST00000073261	protein_coding	principal1	13	1	23533906	399
ENSMUSG00000079055	protein_coding	Slc8a3	ENSMUST00000182366	protein_coding		12	-1	81294674	673
ENSMUSG00000104899	processed_pseudogene	Gm43855	ENSMUST00000197462	processed_pseudogene		5	-1	104987743	507
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000110029	protein_coding		11	-1	3356141	2939
ENSMUSG00000058569	protein_coding	Tmed9	ENSMUST00000224741	protein_coding		13	1	55573732	1450
ENSMUSG00000060131	protein_coding	Atp8b4	ENSMUST00000040149	protein_coding	principal1	2	-1	126491573	3986
ENSMUSG00000026873	protein_coding	Phf19	ENSMUST00000028232	protein_coding	principal1	2	-1	34913976	3741
ENSMUSG00000083941	processed_pseudogene	Gm12889	ENSMUST00000118684	processed_pseudogene		4	1	121379794	241
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000108032	protein_coding		4	-1	41774158	350
ENSMUSG00000079055	protein_coding	Slc8a3	ENSMUST00000183102	retained_intron		12	-1	81333180	2531
ENSMUSG00000042063	protein_coding	Zfp386	ENSMUST00000183125	protein_coding	principal3	12	1	116047776	4779
ENSMUSG00000029722	protein_coding	Agfg2	ENSMUST00000138604	retained_intron		5	-1	137684693	1497
ENSMUSG00000058569	protein_coding	Tmed9	ENSMUST00000225723	retained_intron		13	1	55593158	2206
ENSMUSG00000058569	protein_coding	Tmed9	ENSMUST00000224634	retained_intron		13	1	55593169	603
ENSMUSG00000020821	protein_coding	Kif1c	ENSMUST00000072187	protein_coding	alternative2	11	1	70700576	5046
ENSMUSG00000042063	protein_coding	Zfp386	ENSMUST00000182883	retained_intron		12	1	116047829	3797
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000202530	protein_coding		5	1	150118667	704
ENSMUSG00000107992	unprocessed_pseudogene	Gm44223	ENSMUST00000204854	unprocessed_pseudogene		6	1	128919867	114
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000173865	protein_coding		4	-1	41774169	657
ENSMUSG00000098128	antisense	Gm3693	ENSMUST00000182077	antisense		12	1	81228284	2865
ENSMUSG00000024011	protein_coding	Pi16	ENSMUST00000114701	protein_coding	principal2	17	1	29318824	3994
ENSMUSG00000022905	protein_coding	Kpna1	ENSMUST00000173696	nonsense_mediated_decay		16	1	36000187	1740
ENSMUSG00000024387	protein_coding	Csnk2b	ENSMUST00000025246	protein_coding	principal1	17	-1	35121286	961
ENSMUSG00000060630	protein_coding	Zfp735	ENSMUST00000080407	protein_coding	principal1	11	1	73688778	3746
ENSMUSG00000020821	protein_coding	Kif1c	ENSMUST00000137119	protein_coding	principal2	11	1	70700650	6596
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000207225	protein_coding		7	1	90130213	3489
ENSMUSG00000022905	protein_coding	Kpna1	ENSMUST00000174737	nonsense_mediated_decay		16	1	36000253	532
ENSMUSG00000060630	protein_coding	Zfp735	ENSMUST00000149560	processed_transcript		11	1	73688799	631
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000155240	protein_coding		4	-1	41774247	343
ENSMUSG00000024387	protein_coding	Csnk2b	ENSMUST00000174024	protein_coding		17	-1	35121173	883
ENSMUSG00000060630	protein_coding	Zfp735	ENSMUST00000145996	processed_transcript		11	1	73693923	454
ENSMUSG00000026873	protein_coding	Phf19	ENSMUST00000128663	processed_transcript		2	-1	34904152	2978
ENSMUSG00000058569	protein_coding	Tmed9	ENSMUST00000109905	protein_coding	principal1	13	1	55593169	1420
ENSMUSG00000022905	protein_coding	Kpna1	ENSMUST00000172534	nonsense_mediated_decay		16	1	36013797	2960
ENSMUSG00000024387	protein_coding	Csnk2b	ENSMUST00000173633	protein_coding		17	-1	35118072	555
ENSMUSG00000022905	protein_coding	Kpna1	ENSMUST00000173641	processed_transcript		16	1	36019380	690
ENSMUSG00000022905	protein_coding	Kpna1	ENSMUST00000173469	retained_intron		16	1	36021644	815
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000203000	retained_intron		5	1	150118667	3670
ENSMUSG00000024387	protein_coding	Csnk2b	ENSMUST00000173189	retained_intron		17	-1	35118781	590
ENSMUSG00000058569	protein_coding	Tmed9	ENSMUST00000225888	retained_intron		13	1	55593176	793
ENSMUSG00000026873	protein_coding	Phf19	ENSMUST00000128394	processed_transcript		2	-1	34904907	698
ENSMUSG00000071192	protein_coding	Wfikkn1	ENSMUST00000176696	protein_coding	principal2	17	-1	25880858	2536
ENSMUSG00000024011	protein_coding	Pi16	ENSMUST00000135754	retained_intron		17	1	29318877	2932
ENSMUSG00000020121	protein_coding	Srgap1	ENSMUST00000020322	protein_coding	alternative1	10	-1	122047308	7711
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000143676	retained_intron		4	-1	41774197	487
ENSMUSG00000025781	protein_coding	Atp5c1	ENSMUST00000114896	protein_coding		2	-1	10080444	1735
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000126759	retained_intron		4	-1	41774229	361
ENSMUSG00000026873	protein_coding	Phf19	ENSMUST00000129911	retained_intron		2	-1	34914026	2201
ENSMUSG00000060131	protein_coding	Atp8b4	ENSMUST00000134977	retained_intron		2	-1	126491553	2880
ENSMUSG00000024011	protein_coding	Pi16	ENSMUST00000114699	protein_coding	alternative2	17	1	29319192	1244
ENSMUSG00000071192	protein_coding	Wfikkn1	ENSMUST00000095487	protein_coding	alternative2	17	-1	25880236	1795
ENSMUSG00000026873	protein_coding	Phf19	ENSMUST00000202907	protein_coding		2	-1	34914017	351
ENSMUSG00000023484	protein_coding	Prph	ENSMUST00000230021	protein_coding	alternative2	15	1	99055174	1862
ENSMUSG00000073888	protein_coding	Ccl27a	ENSMUST00000074387	protein_coding	principal3	4	-1	41770212	405
ENSMUSG00000024011	protein_coding	Pi16	ENSMUST00000155348	protein_coding	alternative2	17	1	29319200	1875
ENSMUSG00000060131	protein_coding	Atp8b4	ENSMUST00000147517	nonsense_mediated_decay		2	-1	126499989	2820
ENSMUSG00000024011	protein_coding	Pi16	ENSMUST00000234618	protein_coding		17	1	29319240	397
ENSMUSG00000108377	processed_pseudogene	Gm18642	ENSMUST00000206642	processed_pseudogene		7	1	57026081	1400
ENSMUSG00000024387	protein_coding	Csnk2b	ENSMUST00000172765	protein_coding		17	-1	35122053	828
ENSMUSG00000116553	processed_pseudogene	Gm7307	ENSMUST00000231626	processed_pseudogene		16	1	90163180	391
ENSMUSG00000020121	protein_coding	Srgap1	ENSMUST00000161996	processed_transcript		10	-1	121807104	1714
ENSMUSG00000024387	protein_coding	Csnk2b	ENSMUST00000174306	protein_coding		17	-1	35121030	402
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000020846	protein_coding	principal1	11	-1	60220604	4299
ENSMUSG00000116829	processed_pseudogene	Gm49704	ENSMUST00000231225	processed_pseudogene		16	1	90198148	511
ENSMUSG00000060131	protein_coding	Atp8b4	ENSMUST00000129187	protein_coding		2	-1	126500674	1560
ENSMUSG00000020121	protein_coding	Srgap1	ENSMUST00000161156	protein_coding		10	-1	121823133	595
ENSMUSG00000024387	protein_coding	Csnk2b	ENSMUST00000173915	protein_coding		17	-1	35121998	592
ENSMUSG00000106188	processed_pseudogene	Gm9710	ENSMUST00000198053	processed_pseudogene		5	-1	145266377	499
ENSMUSG00000034300	protein_coding	Fam53c	ENSMUST00000049281	protein_coding	principal1	18	1	34758906	4475
ENSMUSG00000025781	protein_coding	Atp5c1	ENSMUST00000026887	protein_coding	alternative1	2	-1	10080427	1060
ENSMUSG00000024387	protein_coding	Csnk2b	ENSMUST00000174855	retained_intron		17	-1	35121436	405
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000141161	processed_transcript		11	-1	60201040	540
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000202600	protein_coding		5	1	150196466	592
ENSMUSG00000020121	protein_coding	Srgap1	ENSMUST00000162710	retained_intron		10	-1	122047315	1457
ENSMUSG00000023484	protein_coding	Prph	ENSMUST00000047104	protein_coding	principal3	15	1	99055175	1863
ENSMUSG00000092241	antisense	Gm20522	ENSMUST00000173576	antisense		17	-1	35126440	784
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000201854	retained_intron		5	1	150257542	2364
ENSMUSG00000086356	antisense	Gm13441	ENSMUST00000140104	antisense		2	-1	31892417	1168
ENSMUSG00000034300	protein_coding	Fam53c	ENSMUST00000097622	protein_coding	principal1	18	1	34759556	4256
ENSMUSG00000020121	protein_coding	Srgap1	ENSMUST00000081688	protein_coding	principal3	10	-1	122047315	7787
ENSMUSG00000091515	unprocessed_pseudogene	Zfp422-ps	ENSMUST00000182230	unprocessed_pseudogene		17	-1	33305745	707
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000144942	protein_coding		11	-1	60210465	3177
ENSMUSG00000025781	protein_coding	Atp5c1	ENSMUST00000114897	protein_coding	principal2	2	-1	10080510	1166
ENSMUSG00000070420	protein_coding	Zscan25	ENSMUST00000200246	protein_coding		5	1	145280500	685
ENSMUSG00000079163	lincRNA	Gm15498	ENSMUST00000126693	lincRNA		5	-1	137690751	723
ENSMUSG00000112596	TEC	Gm48804	ENSMUST00000218664	TEC		10	-1	121832058	3041
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000141401	processed_transcript		6	-1	88843720	633
ENSMUSG00000034300	protein_coding	Fam53c	ENSMUST00000235929	nonsense_mediated_decay		18	1	34759573	4200
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000129869	processed_transcript		11	-1	60202215	516
ENSMUSG00000070420	protein_coding	Zscan25	ENSMUST00000199563	nonsense_mediated_decay		5	1	145283352	1799
ENSMUSG00000025781	protein_coding	Atp5c1	ENSMUST00000139810	protein_coding		2	-1	10080176	635
ENSMUSG00000096910	protein_coding	Zfp955b	ENSMUST00000099414	protein_coding	principal1	17	1	33289544	5788
ENSMUSG00000025781	protein_coding	Atp5c1	ENSMUST00000145530	protein_coding		2	-1	10080322	1000
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000156304	processed_transcript		11	-1	60202624	755
ENSMUSG00000024571	protein_coding	Gm16286	ENSMUST00000156400	protein_coding	principal1	18	1	80206765	1649
ENSMUSG00000116919	processed_pseudogene	Gm17809	ENSMUST00000232524	processed_pseudogene		16	-1	55884491	1420
ENSMUSG00000096910	protein_coding	Zfp955b	ENSMUST00000234813	processed_transcript		17	1	33302361	330
ENSMUSG00000025781	protein_coding	Atp5c1	ENSMUST00000130067	protein_coding		2	-1	10080055	690
ENSMUSG00000040506	protein_coding	Ambra1	ENSMUST00000099712	protein_coding	alternative1	2	1	91730134	5021
ENSMUSG00000025781	protein_coding	Atp5c1	ENSMUST00000153554	protein_coding		2	-1	10079859	770
ENSMUSG00000114739	processed_pseudogene	Gm47885	ENSMUST00000223806	processed_pseudogene		14	-1	37024534	576
ENSMUSG00000055026	protein_coding	Gabrg3	ENSMUST00000068911	protein_coding	principal1	7	-1	57387188	9767
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000154925	processed_transcript		11	-1	60203857	945
ENSMUSG00000005682	protein_coding	Pan2	ENSMUST00000005825	protein_coding	principal2	10	1	128303335	4445
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000136426	processed_transcript		11	-1	60203488	750
ENSMUSG00000055026	protein_coding	Gabrg3	ENSMUST00000068394	protein_coding		7	-1	57386871	1724
ENSMUSG00000055026	protein_coding	Gabrg3	ENSMUST00000171965	retained_intron		7	-1	57387188	1496
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000149238	processed_transcript		11	-1	60204290	826
ENSMUSG00000070420	protein_coding	Zscan25	ENSMUST00000094116	protein_coding	principal1	5	1	145283352	1796
ENSMUSG00000023484	protein_coding	Prph	ENSMUST00000024249	protein_coding	alternative2	15	1	99055181	1757
ENSMUSG00000108556	processed_pseudogene	Gm17987	ENSMUST00000206902	processed_pseudogene		7	1	56879011	603
ENSMUSG00000103844	lincRNA	4933436E23Rik	ENSMUST00000192824	lincRNA		1	1	139379452	1111
ENSMUSG00000108586	processed_pseudogene	Gm44976	ENSMUST00000205543	processed_pseudogene		7	-1	56838261	261
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000154620	processed_transcript		11	-1	60206112	662
ENSMUSG00000108450	processed_pseudogene	Gm44977	ENSMUST00000205283	processed_pseudogene		7	-1	56855851	420
ENSMUSG00000102661	lincRNA	Gm34816	ENSMUST00000193363	lincRNA		1	1	139408278	502
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000147967	processed_transcript		11	-1	60210392	686
ENSMUSG00000108488	processed_pseudogene	Gm44979	ENSMUST00000206218	processed_pseudogene		7	1	56748274	287
ENSMUSG00000023484	protein_coding	Prph	ENSMUST00000229268	protein_coding		15	1	99055970	397
ENSMUSG00000105741	TEC	C79130	ENSMUST00000199610	TEC		5	-1	29280297	4296
ENSMUSG00000049502	protein_coding	Dtx3l	ENSMUST00000081933	protein_coding	principal1	16	-1	35939151	5309
ENSMUSG00000020538	protein_coding	Srebf1	ENSMUST00000136215	processed_transcript		11	-1	60222581	367
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000036161	protein_coding	principal1	16	-1	17406314	6431
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000193647	protein_coding		3	1	60473074	974
ENSMUSG00000075033	protein_coding	Nxpe3	ENSMUST00000099705	protein_coding	principal1	16	-1	55895285	6436
ENSMUSG00000108647	processed_pseudogene	Gm17984	ENSMUST00000205286	processed_pseudogene		7	-1	56805463	859
ENSMUSG00000101320	antisense	Gm28529	ENSMUST00000186159	antisense		18	1	6490143	387
ENSMUSG00000110013	lincRNA	1190028D05Rik	ENSMUST00000210977	lincRNA		8	1	52356611	763
ENSMUSG00000024571	protein_coding	Gm16286	ENSMUST00000125127	protein_coding	principal1	18	1	80206798	1683
ENSMUSG00000049502	protein_coding	Dtx3l	ENSMUST00000114885	protein_coding		16	-1	35939151	2649
ENSMUSG00000109919	processed_pseudogene	Gm45673	ENSMUST00000210293	processed_pseudogene		8	-1	52554714	358
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000238520	protein_coding		9	-1	123113147	5376
ENSMUSG00000101320	antisense	Gm28529	ENSMUST00000189675	antisense		18	1	6490155	670
ENSMUSG00000040506	protein_coding	Ambra1	ENSMUST00000045705	protein_coding	principal4	2	1	91730225	5203
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000195001	protein_coding		3	1	60473077	367
ENSMUSG00000024571	protein_coding	Gm16286	ENSMUST00000145116	retained_intron		18	1	80206830	968
ENSMUSG00000017639	protein_coding	Rab11fip4	ENSMUST00000017783	protein_coding	principal1	11	1	79591212	7156
ENSMUSG00000082088	unprocessed_pseudogene	Gm15753	ENSMUST00000119241	unprocessed_pseudogene		5	-1	137721740	1062
ENSMUSG00000028447	protein_coding	Dctn3	ENSMUST00000030158	protein_coding	principal1	4	-1	41723170	973
ENSMUSG00000113321	lincRNA	Gm8075	ENSMUST00000223088	lincRNA		12	1	73793483	682
ENSMUSG00000083078	processed_pseudogene	Gm13172	ENSMUST00000118685	processed_pseudogene		4	-1	152678003	256
ENSMUSG00000024571	protein_coding	Gm16286	ENSMUST00000126177	retained_intron		18	1	80206846	679
ENSMUSG00000086324	antisense	Gm15564	ENSMUST00000174085	antisense		16	-1	35981081	511
ENSMUSG00000113321	lincRNA	Gm8075	ENSMUST00000222997	lincRNA		12	1	73793488	394
ENSMUSG00000024571	protein_coding	Gm16286	ENSMUST00000025463	protein_coding	principal1	18	1	80206867	1650
ENSMUSG00000017639	protein_coding	Rab11fip4	ENSMUST00000155381	protein_coding		11	1	79660562	677
ENSMUSG00000040506	protein_coding	Ambra1	ENSMUST00000111316	protein_coding	alternative2	2	1	91730184	5063
ENSMUSG00000059049	protein_coding	Frem1	ENSMUST00000107230	protein_coding	alternative2	4	-1	83052339	9690
ENSMUSG00000073699	lincRNA	Gm833	ENSMUST00000143133	lincRNA		4	1	152697540	884
ENSMUSG00000109983	processed_pseudogene	Gm9685	ENSMUST00000211275	processed_pseudogene		8	1	52774131	538
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000232631	retained_intron		16	-1	17281645	979
ENSMUSG00000028447	protein_coding	Dctn3	ENSMUST00000147120	processed_transcript		4	-1	41723137	344
ENSMUSG00000040506	protein_coding	Ambra1	ENSMUST00000045699	protein_coding	alternative1	2	1	91766445	4690
ENSMUSG00000110362	lincRNA	Gm45554	ENSMUST00000210964	lincRNA		8	1	53436100	1090
ENSMUSG00000110362	lincRNA	Gm45554	ENSMUST00000211410	lincRNA		8	1	53436218	2137
ENSMUSG00000086324	antisense	Gm15564	ENSMUST00000173605	antisense		16	-1	35983230	402
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000147563	protein_coding	principal1	9	-1	123113205	6987
ENSMUSG00000059049	protein_coding	Frem1	ENSMUST00000127886	protein_coding		4	-1	82970703	3574
ENSMUSG00000085648	lincRNA	Gm13173	ENSMUST00000151703	lincRNA		4	-1	153146943	441
ENSMUSG00000110362	lincRNA	Gm45554	ENSMUST00000210731	lincRNA		8	1	53445669	1004
ENSMUSG00000053004	protein_coding	Hrh1	ENSMUST00000088987	protein_coding	principal1	6	1	114397936	3782
ENSMUSG00000003929	protein_coding	Zfp81	ENSMUST00000054072	protein_coding	principal1	17	-1	33358878	6639
ENSMUSG00000028447	protein_coding	Dctn3	ENSMUST00000171641	protein_coding		4	-1	41723163	885
ENSMUSG00000087434	antisense	Rab11fip4os1	ENSMUST00000145652	antisense		11	-1	79623163	2187
ENSMUSG00000086324	antisense	Gm15564	ENSMUST00000144134	antisense		16	-1	35981141	545
ENSMUSG00000087454	lincRNA	Gm13174	ENSMUST00000126141	lincRNA		4	1	153218176	220
ENSMUSG00000024571	protein_coding	Gm16286	ENSMUST00000127234	protein_coding	principal1	18	1	80206895	1755
ENSMUSG00000113699	lincRNA	Gm48823	ENSMUST00000222647	lincRNA		12	1	73822587	645
ENSMUSG00000003929	protein_coding	Zfp81	ENSMUST00000234016	protein_coding		17	-1	33358874	1477
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000231914	retained_intron		16	-1	17284963	1504
ENSMUSG00000086569	antisense	Rab11fip4os2	ENSMUST00000132921	antisense		11	-1	79675083	355
ENSMUSG00000024571	protein_coding	Gm16286	ENSMUST00000155879	retained_intron		18	1	80206913	565
ENSMUSG00000053004	protein_coding	Hrh1	ENSMUST00000160212	protein_coding		6	1	114398086	476
ENSMUSG00000059049	protein_coding	Frem1	ENSMUST00000131102	processed_transcript		4	-1	83052339	3891
ENSMUSG00000041255	protein_coding	Tmco5b	ENSMUST00000040856	protein_coding	principal1	2	1	113285732	1237
ENSMUSG00000024571	protein_coding	Gm16286	ENSMUST00000125352	retained_intron		18	1	80206918	767
ENSMUSG00000003929	protein_coding	Zfp81	ENSMUST00000235063	nonsense_mediated_decay		17	-1	33358868	812
ENSMUSG00000024571	protein_coding	Gm16286	ENSMUST00000153363	protein_coding	principal1	18	1	80207260	1602
ENSMUSG00000005682	protein_coding	Pan2	ENSMUST00000218496	retained_intron		10	1	128303363	5051
ENSMUSG00000086569	antisense	Rab11fip4os2	ENSMUST00000123067	antisense		11	-1	79675128	689
ENSMUSG00000024454	protein_coding	Hdac3	ENSMUST00000043498	protein_coding	principal1	18	-1	37955016	2032
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000232232	protein_coding	principal1	16	-1	17405893	6630
ENSMUSG00000059049	protein_coding	Frem1	ENSMUST00000130889	retained_intron		4	-1	82924792	1252
ENSMUSG00000053004	protein_coding	Hrh1	ENSMUST00000161650	protein_coding	principal1	6	1	114403666	2978
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000107046	protein_coding	alternative1	7	-1	100656953	2793
ENSMUSG00000005682	protein_coding	Pan2	ENSMUST00000218315	protein_coding	alternative2	10	1	128303374	4379
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000026892	nonsense_mediated_decay		9	-1	123113180	2492
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000231917	retained_intron		16	-1	17282075	669
ENSMUSG00000040506	protein_coding	Ambra1	ENSMUST00000124132	processed_transcript		2	1	91730182	3332
ENSMUSG00000059049	protein_coding	Frem1	ENSMUST00000141841	retained_intron		4	-1	82940882	632
ENSMUSG00000005682	protein_coding	Pan2	ENSMUST00000219801	retained_intron		10	1	128303376	3410
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000231529	retained_intron		16	-1	17284125	932
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000155778	nonsense_mediated_decay		9	-1	123113166	1633
ENSMUSG00000005682	protein_coding	Pan2	ENSMUST00000219721	protein_coding	alternative2	10	1	128303377	4316
ENSMUSG00000040506	protein_coding	Ambra1	ENSMUST00000133490	processed_transcript		2	1	91773232	663
ENSMUSG00000040506	protein_coding	Ambra1	ENSMUST00000156496	processed_transcript		2	1	91730182	3419
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000231683	nonsense_mediated_decay		16	-1	17307730	803
ENSMUSG00000059049	protein_coding	Frem1	ENSMUST00000133610	processed_transcript		4	-1	82914434	634
ENSMUSG00000031523	protein_coding	Dlc1	ENSMUST00000033923	protein_coding	principal1	8	-1	36613943	6159
ENSMUSG00000053004	protein_coding	Hrh1	ENSMUST00000161220	protein_coding	principal1	6	1	114403825	2817
ENSMUSG00000040506	protein_coding	Ambra1	ENSMUST00000142224	processed_transcript		2	1	91811668	248
ENSMUSG00000059049	protein_coding	Frem1	ENSMUST00000071708	protein_coding	principal3	4	-1	83021102	9307
ENSMUSG00000040506	protein_coding	Ambra1	ENSMUST00000111317	protein_coding	alternative1	2	1	91730138	4929
ENSMUSG00000005682	protein_coding	Pan2	ENSMUST00000218137	processed_transcript		10	1	128303392	1601
ENSMUSG00000031523	protein_coding	Dlc1	ENSMUST00000098826	protein_coding		8	-1	36733054	6241
ENSMUSG00000053004	protein_coding	Hrh1	ENSMUST00000160780	protein_coding	principal1	6	1	114458519	2782
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000138622	nonsense_mediated_decay		9	-1	123113178	1727
ENSMUSG00000115766	processed_pseudogene	Gm49139	ENSMUST00000226709	processed_pseudogene		15	1	18479336	464
ENSMUSG00000115254	processed_pseudogene	Gm49140	ENSMUST00000228241	processed_pseudogene		15	1	18635706	301
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000129862	nonsense_mediated_decay		9	-1	123100349	600
ENSMUSG00000005682	protein_coding	Pan2	ENSMUST00000219255	retained_intron		10	1	128303398	4759
ENSMUSG00000084873	lincRNA	C030047K22Rik	ENSMUST00000150382	lincRNA		15	-1	18818774	1164
ENSMUSG00000024454	protein_coding	Hdac3	ENSMUST00000153945	retained_intron		18	-1	37943991	1040
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000152396	nonsense_mediated_decay		9	-1	123113121	811
ENSMUSG00000022982	protein_coding	Sod1	ENSMUST00000023707	protein_coding	principal1	16	1	90220754	641
ENSMUSG00000031523	protein_coding	Dlc1	ENSMUST00000163663	protein_coding		8	-1	36952442	5113
ENSMUSG00000057130	protein_coding	Txnl4a	ENSMUST00000145963	protein_coding	principal1	18	1	80206795	4078
ENSMUSG00000066224	protein_coding	Arid3c	ENSMUST00000084698	protein_coding	principal3	4	-1	41730286	1417
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000231651	nonsense_mediated_decay		16	-1	17325444	888
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000129151	retained_intron		9	-1	123113204	2127
ENSMUSG00000059049	protein_coding	Frem1	ENSMUST00000170248	protein_coding	alternative2	4	-1	83052167	9527
ENSMUSG00000066224	protein_coding	Arid3c	ENSMUST00000150809	protein_coding	alternative2	4	-1	41730286	1327
ENSMUSG00000022982	protein_coding	Sod1	ENSMUST00000232505	retained_intron		16	1	90220754	3970
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000150679	nonsense_mediated_decay		9	-1	123113124	906
ENSMUSG00000031523	protein_coding	Dlc1	ENSMUST00000156312	retained_intron		8	-1	36577269	3423
ENSMUSG00000100432	processed_pseudogene	Gm7539	ENSMUST00000189789	processed_pseudogene		1	1	83015393	630
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000232404	protein_coding		16	-1	17350832	958
ENSMUSG00000057130	protein_coding	Txnl4a	ENSMUST00000025464	protein_coding		18	1	80206863	517
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000123937	nonsense_mediated_decay		9	-1	123113178	793
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000231961	retained_intron		16	-1	17350794	608
ENSMUSG00000022983	protein_coding	Scaf4	ENSMUST00000232000	processed_transcript		16	-1	90230208	574
ENSMUSG00000025786	protein_coding	Zdhhc3	ENSMUST00000130717	protein_coding		9	-1	123112832	672
ENSMUSG00000095557	protein_coding	Gm3415	ENSMUST00000179214	protein_coding	principal2	5	1	146556136	1154
ENSMUSG00000031523	protein_coding	Dlc1	ENSMUST00000145245	retained_intron		8	-1	36613874	616
ENSMUSG00000057130	protein_coding	Txnl4a	ENSMUST00000126360	retained_intron		18	1	80206894	419
ENSMUSG00000066224	protein_coding	Arid3c	ENSMUST00000171251	protein_coding	principal3	4	-1	41731142	1751
ENSMUSG00000057130	protein_coding	Txnl4a	ENSMUST00000130675	processed_transcript		18	1	80215380	461
ENSMUSG00000041720	protein_coding	Pi4ka	ENSMUST00000231419	retained_intron		16	-1	17405893	3855
ENSMUSG00000031523	protein_coding	Dlc1	ENSMUST00000036104	retained_intron		8	-1	36952357	2756
ENSMUSG00000031523	protein_coding	Dlc1	ENSMUST00000178717	retained_intron		8	-1	36952422	1866
ENSMUSG00000095557	protein_coding	Gm3415	ENSMUST00000110595	protein_coding	alternative2	5	1	146556164	924
ENSMUSG00000024454	protein_coding	Hdac3	ENSMUST00000236756	nonsense_mediated_decay		18	-1	37954918	615
ENSMUSG00000083226	processed_pseudogene	Gm7831	ENSMUST00000117990	processed_pseudogene		16	1	90915180	547
ENSMUSG00000036114	protein_coding	Rpp25l	ENSMUST00000038434	protein_coding	principal1	4	-1	41713534	856
ENSMUSG00000024454	protein_coding	Hdac3	ENSMUST00000235700	nonsense_mediated_decay		18	-1	37954974	683
ENSMUSG00000031523	protein_coding	Dlc1	ENSMUST00000179652	retained_intron		8	-1	36952436	3491
ENSMUSG00000105149	TEC	Gm42983	ENSMUST00000199879	TEC		5	1	44224510	815
ENSMUSG00000031523	protein_coding	Dlc1	ENSMUST00000179501	protein_coding		8	-1	36953143	403
ENSMUSG00000112124	processed_pseudogene	Gm19056	ENSMUST00000218220	processed_pseudogene		12	-1	32929947	797
ENSMUSG00000112887	processed_pseudogene	Gm47961	ENSMUST00000219303	processed_pseudogene		12	-1	32931732	253
ENSMUSG00000091268	IG_V_pseudogene	Igkv17-134	ENSMUST00000168310	IG_V_pseudogene		6	-1	67721225	348
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000107045	protein_coding	alternative1	7	-1	100656980	1919
ENSMUSG00000026270	protein_coding	Capn10	ENSMUST00000027488	protein_coding	principal1	1	1	92934376	2902
ENSMUSG00000066233	protein_coding	Tmem42	ENSMUST00000084733	protein_coding	principal1	9	1	123021326	1041
ENSMUSG00000038496	protein_coding	Slc19a3	ENSMUST00000045560	protein_coding	principal1	1	-1	83038448	2974
ENSMUSG00000066233	protein_coding	Tmem42	ENSMUST00000213514	protein_coding		9	1	123021375	631
ENSMUSG00000097494	lincRNA	4933406C10Rik	ENSMUST00000181670	lincRNA		12	-1	32953789	1633
ENSMUSG00000026270	protein_coding	Capn10	ENSMUST00000117814	protein_coding		1	1	92934766	1268
ENSMUSG00000066233	protein_coding	Tmem42	ENSMUST00000214077	processed_transcript		9	1	123021418	415
ENSMUSG00000043850	protein_coding	Clrn1	ENSMUST00000055636	protein_coding		3	-1	58885212	3083
ENSMUSG00000026270	protein_coding	Capn10	ENSMUST00000152983	nonsense_mediated_decay		1	1	92934833	2171
ENSMUSG00000038496	protein_coding	Slc19a3	ENSMUST00000142805	processed_transcript		1	-1	83020232	1892
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000207484	protein_coding	principal3	7	1	90130215	8209
ENSMUSG00000066233	protein_coding	Tmem42	ENSMUST00000214785	nonsense_mediated_decay		9	1	123021418	449
ENSMUSG00000097494	lincRNA	4933406C10Rik	ENSMUST00000180391	lincRNA		12	-1	32953783	1451
ENSMUSG00000026270	protein_coding	Capn10	ENSMUST00000187342	nonsense_mediated_decay		1	1	92940459	752
ENSMUSG00000038496	protein_coding	Slc19a3	ENSMUST00000164473	protein_coding	principal1	1	-1	83038431	1550
ENSMUSG00000022765	protein_coding	Snap29	ENSMUST00000023449	protein_coding	principal1	16	1	17405986	3447
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000209068	protein_coding	alternative1	7	1	90130230	3511
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000074834	protein_coding	alternative2	15	-1	76229497	14855
ENSMUSG00000112916	processed_pseudogene	Gm18622	ENSMUST00000219361	processed_pseudogene		12	1	32930124	595
ENSMUSG00000026270	protein_coding	Capn10	ENSMUST00000128429	retained_intron		1	1	92942704	829
ENSMUSG00000043850	protein_coding	Clrn1	ENSMUST00000072551	protein_coding		3	-1	58885212	1662
ENSMUSG00000031521	protein_coding	Aga	ENSMUST00000211424	protein_coding		8	1	53511727	1147
ENSMUSG00000110945	antisense	Gm9856	ENSMUST00000217077	antisense		9	-1	123021572	2578
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000031344	protein_coding	principal3	5	-1	124327972	7747
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000207596	retained_intron		7	1	90130264	1858
ENSMUSG00000105189	processed_pseudogene	Gm7774	ENSMUST00000200064	processed_pseudogene		5	-1	126026473	533
ENSMUSG00000026270	protein_coding	Capn10	ENSMUST00000153828	processed_transcript		1	1	92946553	317
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000207949	processed_transcript		7	1	90130292	700
ENSMUSG00000104175	TEC	Gm37700	ENSMUST00000192617	TEC		5	1	126448458	965
ENSMUSG00000026270	protein_coding	Capn10	ENSMUST00000136598	retained_intron		1	1	92946885	458
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000208730	protein_coding	alternative1	7	1	90130293	3427
ENSMUSG00000104825	lincRNA	Gm40330	ENSMUST00000196498	lincRNA		5	-1	126504975	669
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000207197	retained_intron		7	1	90130495	3807
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000208742	protein_coding		7	1	90130504	3361
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000192807	protein_coding		3	1	60473079	2906
ENSMUSG00000043850	protein_coding	Clrn1	ENSMUST00000051408	protein_coding	principal1	3	-1	58885340	1204
ENSMUSG00000032783	protein_coding	Troap	ENSMUST00000230054	protein_coding	principal1	15	1	99074575	2639
ENSMUSG00000106235	lincRNA	Gm33347	ENSMUST00000200003	lincRNA		5	-1	126727284	681
ENSMUSG00000071537	protein_coding	Klrg2	ENSMUST00000202245	nonsense_mediated_decay		6	-1	38637233	3413
ENSMUSG00000025730	protein_coding	Rab40c	ENSMUST00000166146	nonsense_mediated_decay		17	-1	25919556	2900
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000192086	processed_transcript		3	1	60500935	373
ENSMUSG00000031153	protein_coding	Gripap1	ENSMUST00000065932	protein_coding	principal3	X	1	7789765	3156
ENSMUSG00000109755	processed_pseudogene	Gm8489	ENSMUST00000209876	processed_pseudogene		8	1	91157739	1152
ENSMUSG00000033964	protein_coding	Zbtb41	ENSMUST00000200243	protein_coding		1	1	139422288	2127
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000049537	protein_coding	alternative2	7	1	90130516	3528
ENSMUSG00000043850	protein_coding	Clrn1	ENSMUST00000161419	retained_intron		3	-1	58865797	915
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000038409	protein_coding	principal3	6	-1	88874045	1994
ENSMUSG00000031521	protein_coding	Aga	ENSMUST00000033920	protein_coding	principal1	8	1	53511727	1181
ENSMUSG00000105673	lincRNA	1700081B01Rik	ENSMUST00000197543	lincRNA		5	1	126706914	648
ENSMUSG00000031153	protein_coding	Gripap1	ENSMUST00000136930	protein_coding		X	1	7789994	1489
ENSMUSG00000105673	lincRNA	1700081B01Rik	ENSMUST00000197352	lincRNA		5	1	126706936	310
ENSMUSG00000032783	protein_coding	Troap	ENSMUST00000039665	protein_coding	principal1	15	1	99074978	2255
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000208684	protein_coding		7	1	90131645	334
ENSMUSG00000020476	protein_coding	Dbnl	ENSMUST00000109845	protein_coding	alternative2	11	1	5788488	2001
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000207084	protein_coding		7	1	90165513	2929
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000061262	protein_coding	principal3	6	-1	88874597	2195
ENSMUSG00000105316	lincRNA	Gm42953	ENSMUST00000199363	lincRNA		5	-1	126815482	581
ENSMUSG00000022766	protein_coding	Serpind1	ENSMUST00000023450	protein_coding	principal1	16	1	17331371	2191
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000208089	protein_coding		7	1	90172250	2743
ENSMUSG00000032783	protein_coding	Troap	ENSMUST00000230868	retained_intron		15	1	99074987	714
ENSMUSG00000047875	protein_coding	Gpr157	ENSMUST00000094451	protein_coding	principal1	4	1	150087365	4900
ENSMUSG00000031521	protein_coding	Aga	ENSMUST00000209811	nonsense_mediated_decay		8	1	53511798	2250
ENSMUSG00000000248	protein_coding	Clec2g	ENSMUST00000000254	protein_coding	principal1	6	1	128934381	2463
ENSMUSG00000032783	protein_coding	Troap	ENSMUST00000230311	retained_intron		15	1	99075030	819
ENSMUSG00000051177	protein_coding	Plcb1	ENSMUST00000131552	protein_coding	principal3	2	1	134786067	7202
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000208891	retained_intron		7	1	90188803	763
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000145944	protein_coding	alternative2	6	-1	88875044	2065
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000099087	protein_coding	principal3	3	1	60501179	5655
ENSMUSG00000025787	protein_coding	Tgm4	ENSMUST00000217607	nonsense_mediated_decay		9	1	123034726	951
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000207106	retained_intron		7	1	90193099	1873
ENSMUSG00000039361	protein_coding	Picalm	ENSMUST00000208127	retained_intron		7	1	90195232	574
ENSMUSG00000118596	unprocessed_pseudogene	AL606971.1	ENSMUST00000239356	unprocessed_pseudogene		4	1	150112425	76
ENSMUSG00000022766	protein_coding	Serpind1	ENSMUST00000231884	protein_coding	principal1	16	1	17331383	2051
ENSMUSG00000032783	protein_coding	Troap	ENSMUST00000229740	retained_intron		15	1	99081584	865
ENSMUSG00000031153	protein_coding	Gripap1	ENSMUST00000115675	protein_coding	alternative2	X	1	7789995	3015
ENSMUSG00000000248	protein_coding	Clec2g	ENSMUST00000146925	retained_intron		6	1	128934405	368
ENSMUSG00000109005	TEC	Gm45221	ENSMUST00000207822	TEC		7	1	90185927	2272
ENSMUSG00000000248	protein_coding	Clec2g	ENSMUST00000203405	protein_coding		6	1	128971160	967
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000192637	retained_intron		3	1	60501220	2934
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000124562	retained_intron		6	-1	88845925	604
ENSMUSG00000109429	TEC	Gm45223	ENSMUST00000207037	TEC		7	1	90132492	5138
ENSMUSG00000087094	lincRNA	Gm13093	ENSMUST00000126212	lincRNA		4	-1	150119263	2485
ENSMUSG00000032783	protein_coding	Troap	ENSMUST00000229224	retained_intron		15	1	99082832	451
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000141348	processed_transcript		6	-1	88849377	719
ENSMUSG00000109279	TEC	Gm45220	ENSMUST00000207847	TEC		7	1	90201278	2509
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000205158	retained_intron		6	-1	88848843	1876
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000191638	processed_transcript		3	1	60501237	1508
ENSMUSG00000069678	protein_coding	Pcgf1	ENSMUST00000176100	protein_coding		6	1	83077869	549
ENSMUSG00000116371	antisense	Gm34284	ENSMUST00000230027	antisense		15	-1	99074669	478
ENSMUSG00000000248	protein_coding	Clec2g	ENSMUST00000142388	protein_coding		6	1	128971160	2404
ENSMUSG00000114912	processed_pseudogene	Gm48049	ENSMUST00000224425	processed_pseudogene		13	1	98557761	271
ENSMUSG00000033964	protein_coding	Zbtb41	ENSMUST00000039867	protein_coding	principal1	1	1	139422382	8361
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000140455	protein_coding		6	-1	88874738	788
ENSMUSG00000114521	processed_transcript	Gm48050	ENSMUST00000224567	processed_transcript		13	-1	98617662	809
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000145780	protein_coding		6	-1	88874796	724
ENSMUSG00000000248	protein_coding	Clec2g	ENSMUST00000204259	protein_coding		6	1	128971261	893
ENSMUSG00000114733	processed_pseudogene	Gm4815	ENSMUST00000223936	processed_pseudogene		13	1	98613501	994
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000195839	retained_intron		3	1	60501265	3026
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000194003	processed_transcript		3	1	60501265	350
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000142266	processed_transcript		6	-1	88865266	320
ENSMUSG00000022906	protein_coding	Parp9	ENSMUST00000114878	protein_coding	principal1	16	1	35938470	3548
ENSMUSG00000000248	protein_coding	Clec2g	ENSMUST00000075789	protein_coding		6	1	128979409	729
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000164759	protein_coding	alternative2	7	-1	110614922	7090
ENSMUSG00000051177	protein_coding	Plcb1	ENSMUST00000110116	protein_coding	alternative1	2	1	134786159	7003
ENSMUSG00000031153	protein_coding	Gripap1	ENSMUST00000147232	retained_intron		X	1	7790006	477
ENSMUSG00000020476	protein_coding	Dbnl	ENSMUST00000020769	protein_coding	alternative2	11	1	5788522	1638
ENSMUSG00000071537	protein_coding	Klrg2	ENSMUST00000096030	protein_coding	principal2	6	-1	38637233	2276
ENSMUSG00000031153	protein_coding	Gripap1	ENSMUST00000101694	protein_coding	alternative2	X	1	7790008	2867
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000153852	retained_intron		6	-1	88874989	1085
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000191747	protein_coding		3	1	60501265	4046
ENSMUSG00000033964	protein_coding	Zbtb41	ENSMUST00000199011	nonsense_mediated_decay		1	1	139423654	3803
ENSMUSG00000031153	protein_coding	Gripap1	ENSMUST00000140540	protein_coding		X	1	7790012	1423
ENSMUSG00000033152	protein_coding	Podxl2	ENSMUST00000135843	retained_intron		6	-1	88874377	628
ENSMUSG00000071537	protein_coding	Klrg2	ENSMUST00000201345	protein_coding	alternative2	6	-1	38637242	1225
ENSMUSG00000051177	protein_coding	Plcb1	ENSMUST00000130524	retained_intron		2	1	134786175	1785
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000166020	protein_coding	alternative2	7	-1	110614761	5481
ENSMUSG00000048031	protein_coding	Fcrl5	ENSMUST00000194102	protein_coding	principal4	3	1	87435773	2449
ENSMUSG00000085828	antisense	Gm15612	ENSMUST00000147542	antisense		6	1	88842854	3118
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000194069	protein_coding		3	1	60501278	5460
ENSMUSG00000048031	protein_coding	Fcrl5	ENSMUST00000193229	protein_coding	alternative2	3	1	87435813	2626
ENSMUSG00000085786	antisense	Gm15987	ENSMUST00000141700	antisense		6	-1	128975029	2231
ENSMUSG00000005233	protein_coding	Spc25	ENSMUST00000112320	protein_coding	alternative2	2	-1	69206135	1527
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000149874	processed_transcript		1	1	58711508	676
ENSMUSG00000050240	protein_coding	Hic2	ENSMUST00000090190	protein_coding	principal1	16	1	17233572	6354
ENSMUSG00000079223	processed_pseudogene	Gm8778	ENSMUST00000127246	processed_pseudogene		6	-1	128977972	1107
ENSMUSG00000005233	protein_coding	Spc25	ENSMUST00000127243	protein_coding		2	-1	69206157	1162
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000165992	retained_intron		7	-1	110340285	920
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000147737	nonsense_mediated_decay		5	-1	124327849	5959
ENSMUSG00000042962	processed_pseudogene	Gm5436	ENSMUST00000058103	processed_pseudogene		12	-1	84258973	643
ENSMUSG00000048031	protein_coding	Fcrl5	ENSMUST00000166297	protein_coding	alternative2	3	1	87435885	1527
ENSMUSG00000022906	protein_coding	Parp9	ENSMUST00000023622	protein_coding		16	1	35939011	2973
ENSMUSG00000048031	protein_coding	Fcrl5	ENSMUST00000049926	protein_coding	principal4	3	1	87435885	1791
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000192623	processed_transcript		3	1	60528128	732
ENSMUSG00000048031	protein_coding	Fcrl5	ENSMUST00000178261	protein_coding	alternative2	3	1	87435885	1791
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000164599	protein_coding		7	-1	110362145	1018
ENSMUSG00000050240	protein_coding	Hic2	ENSMUST00000232082	protein_coding		16	1	17233664	2765
ENSMUSG00000005233	protein_coding	Spc25	ENSMUST00000005365	protein_coding	alternative2	2	-1	69206194	1352
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000194201	protein_coding		3	1	60529031	4319
ENSMUSG00000046985	protein_coding	Tapt1	ENSMUST00000055128	protein_coding	principal1	5	-1	44226622	3513
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000169740	retained_intron		7	-1	110352241	1681
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000193517	protein_coding	alternative1	3	1	60529031	5151
ENSMUSG00000005233	protein_coding	Spc25	ENSMUST00000149045	protein_coding		2	-1	69205130	545
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000184951	protein_coding	alternative2	5	-1	124327852	5008
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000164525	protein_coding		7	-1	110364586	733
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000192607	protein_coding	alternative1	3	1	60529149	4552
ENSMUSG00000051177	protein_coding	Plcb1	ENSMUST00000202531	retained_intron		2	1	134786229	2672
ENSMUSG00000020476	protein_coding	Dbnl	ENSMUST00000102928	protein_coding	principal3	11	1	5788530	2295
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000143476	processed_transcript		5	-1	124261103	987
ENSMUSG00000005233	protein_coding	Spc25	ENSMUST00000149643	protein_coding		2	-1	69206180	685
ENSMUSG00000051177	protein_coding	Plcb1	ENSMUST00000070724	protein_coding	principal3	2	1	134786530	3853
ENSMUSG00000022906	protein_coding	Parp9	ENSMUST00000114877	retained_intron		16	1	35939012	2608
ENSMUSG00000026840	protein_coding	Lamc3	ENSMUST00000138325	protein_coding		2	1	31887291	4664
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000128027	processed_transcript		5	-1	124265319	596
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000101640	protein_coding		11	-1	3371376	3711
ENSMUSG00000022906	protein_coding	Parp9	ENSMUST00000128878	retained_intron		16	1	35939030	717
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000101642	protein_coding	alternative1	11	-1	3371376	3693
ENSMUSG00000116836	TEC	Gm49727	ENSMUST00000232334	TEC		16	1	90925532	2579
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000156745	processed_transcript		5	-1	124263012	315
ENSMUSG00000022906	protein_coding	Parp9	ENSMUST00000122870	nonsense_mediated_decay		16	1	35939061	761
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000142498	retained_intron		5	-1	124263383	593
ENSMUSG00000051177	protein_coding	Plcb1	ENSMUST00000129382	processed_transcript		2	1	135220718	493
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000140940	processed_transcript		1	1	58711508	2064
ENSMUSG00000022906	protein_coding	Parp9	ENSMUST00000153066	processed_transcript		16	1	35941033	742
ENSMUSG00000046899	protein_coding	Prl7a2	ENSMUST00000006660	protein_coding	principal1	13	-1	27668036	1277
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000192394	retained_intron		3	1	60529549	4314
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000130502	nonsense_mediated_decay		5	-1	124327870	2071
ENSMUSG00000022906	protein_coding	Parp9	ENSMUST00000159160	nonsense_mediated_decay		16	1	35948284	468
ENSMUSG00000031153	protein_coding	Gripap1	ENSMUST00000132456	processed_transcript		X	1	7790018	2972
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000193130	processed_transcript		3	1	60529631	1019
ENSMUSG00000051177	protein_coding	Plcb1	ENSMUST00000201485	nonsense_mediated_decay		2	1	135220765	626
ENSMUSG00000005233	protein_coding	Spc25	ENSMUST00000126638	processed_transcript		2	-1	69206123	1869
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000164900	processed_transcript		1	1	58711510	694
ENSMUSG00000083946	unprocessed_pseudogene	Gm11359	ENSMUST00000120039	unprocessed_pseudogene		13	-1	27690868	567
ENSMUSG00000051177	protein_coding	Plcb1	ENSMUST00000201524	processed_transcript		2	1	135249173	774
ENSMUSG00000082758	processed_pseudogene	Gm13024	ENSMUST00000121756	processed_pseudogene		4	1	145390943	718
ENSMUSG00000083332	processed_pseudogene	Gm7599	ENSMUST00000121453	processed_pseudogene		18	-1	12743259	796
ENSMUSG00000005233	protein_coding	Spc25	ENSMUST00000149401	processed_transcript		2	-1	69205215	570
ENSMUSG00000084272	processed_pseudogene	Gm13224	ENSMUST00000119586	processed_pseudogene		4	1	145404306	94
ENSMUSG00000085631	antisense	9630028H03Rik	ENSMUST00000153402	antisense		2	-1	135583584	1559
ENSMUSG00000031153	protein_coding	Gripap1	ENSMUST00000135622	retained_intron		X	1	7798447	2252
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000192757	protein_coding		3	1	60595641	576
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000141203	nonsense_mediated_decay		5	-1	124325127	1778
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000156870	processed_transcript		1	1	58711516	351
ENSMUSG00000117099	processed_pseudogene	Gm3547	ENSMUST00000233551	processed_pseudogene		17	1	20049043	245
ENSMUSG00000005233	protein_coding	Spc25	ENSMUST00000150505	processed_transcript		2	-1	69206179	361
ENSMUSG00000031153	protein_coding	Gripap1	ENSMUST00000141178	processed_transcript		X	1	7810267	407
ENSMUSG00000093401	unprocessed_pseudogene	Vmn2r-ps126	ENSMUST00000176711	unprocessed_pseudogene		17	1	20079965	1310
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000193518	protein_coding		3	1	60595711	1343
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000107047	protein_coding	alternative1	7	-1	100662365	1926
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000195817	protein_coding		3	1	60595711	1441
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000124567	processed_transcript		1	1	58711534	378
ENSMUSG00000082082	transcribed_unprocessed_pseudogene	Gm13230	ENSMUST00000120870	transcribed_unprocessed_pseudogene		4	1	145446740	1575
ENSMUSG00000085631	antisense	9630028H03Rik	ENSMUST00000129868	antisense		2	-1	135583296	2364
ENSMUSG00000021804	protein_coding	Rgr	ENSMUST00000225070	protein_coding		14	-1	37048941	4704
ENSMUSG00000036073	protein_coding	Galt	ENSMUST00000084695	protein_coding	principal2	4	1	41755228	1595
ENSMUSG00000026840	protein_coding	Lamc3	ENSMUST00000028187	protein_coding	principal1	2	1	31887344	5871
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000097723	processed_transcript		1	1	58711544	708
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000192520	retained_intron		3	1	60603538	822
ENSMUSG00000031153	protein_coding	Gripap1	ENSMUST00000144946	retained_intron		X	1	7818919	965
ENSMUSG00000027763	protein_coding	Mbnl1	ENSMUST00000193175	retained_intron		3	1	60623278	2053
ENSMUSG00000079272	unprocessed_pseudogene	Gm7152	ENSMUST00000163570	unprocessed_pseudogene		14	1	42825371	605
ENSMUSG00000036073	protein_coding	Galt	ENSMUST00000108038	protein_coding	alternative2	4	1	41755228	1859
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000134576	processed_transcript		11	-1	3371376	3849
ENSMUSG00000104125	TEC	Gm37488	ENSMUST00000195434	TEC		3	1	60604384	3374
ENSMUSG00000026840	protein_coding	Lamc3	ENSMUST00000135995	processed_transcript		2	1	31925057	292
ENSMUSG00000085247	antisense	4930545L23Rik	ENSMUST00000138303	antisense		2	-1	135215616	2502
ENSMUSG00000025787	protein_coding	Tgm4	ENSMUST00000026893	protein_coding	principal1	9	1	123034726	2785
ENSMUSG00000085101	processed_transcript	Platr16	ENSMUST00000143127	processed_transcript		4	1	145410245	375
ENSMUSG00000046985	protein_coding	Tapt1	ENSMUST00000199374	nonsense_mediated_decay		5	-1	44226617	3372
ENSMUSG00000099732	processed_pseudogene	Gm17752	ENSMUST00000185787	processed_pseudogene		1	-1	112057110	7214
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000149933	processed_transcript		5	-1	124327852	1197
ENSMUSG00000085101	processed_transcript	Platr16	ENSMUST00000150529	processed_transcript		4	1	145410266	545
ENSMUSG00000046985	protein_coding	Tapt1	ENSMUST00000198388	retained_intron		5	-1	44182826	977
ENSMUSG00000038126	protein_coding	Mphosph9	ENSMUST00000156013	processed_transcript		5	-1	124327972	1313
ENSMUSG00000101220	processed_pseudogene	Gm6717	ENSMUST00000185549	processed_pseudogene		1	1	112137868	838
ENSMUSG00000105228	TEC	Gm43340	ENSMUST00000200448	TEC		5	-1	124301827	1344
ENSMUSG00000094804	protein_coding	Gm21977	ENSMUST00000163725	protein_coding	principal1	14	-1	42853477	1402
ENSMUSG00000100020	processed_pseudogene	Gm19086	ENSMUST00000190772	processed_pseudogene		1	1	112151089	665
ENSMUSG00000046985	protein_coding	Tapt1	ENSMUST00000198348	retained_intron		5	-1	44192122	710
ENSMUSG00000025787	protein_coding	Tgm4	ENSMUST00000143364	processed_transcript		9	1	123034739	671
ENSMUSG00000114783	processed_pseudogene	Gm48217	ENSMUST00000224668	processed_pseudogene		14	1	42866650	208
ENSMUSG00000101054	processed_pseudogene	Gm18406	ENSMUST00000185872	processed_pseudogene		1	-1	112404855	669
ENSMUSG00000022757	protein_coding	Tfg	ENSMUST00000065515	protein_coding	principal1	16	-1	56717450	1945
ENSMUSG00000025787	protein_coding	Tgm4	ENSMUST00000171897	processed_transcript		9	1	123034740	526
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000079176	protein_coding	principal3	7	-1	100662414	2079
ENSMUSG00000005233	protein_coding	Spc25	ENSMUST00000167875	protein_coding	principal3	2	-1	69206190	1194
ENSMUSG00000090947	unprocessed_pseudogene	Gm3102	ENSMUST00000164236	unprocessed_pseudogene		14	-1	42979191	489
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000023226	protein_coding	alternative2	15	-1	76195710	15001
ENSMUSG00000116873	processed_pseudogene	Gm49577	ENSMUST00000231967	processed_pseudogene		16	-1	57762158	460
ENSMUSG00000021804	protein_coding	Rgr	ENSMUST00000022338	protein_coding	principal1	14	-1	37048964	4240
ENSMUSG00000099884	processed_pseudogene	Gm8204	ENSMUST00000185696	processed_pseudogene		1	-1	112875988	2144
ENSMUSG00000106392	processed_pseudogene	Gm5870	ENSMUST00000196461	processed_pseudogene		5	-1	104989331	282
ENSMUSG00000083901	processed_pseudogene	Gm12885	ENSMUST00000122246	processed_pseudogene		4	1	121380595	328
ENSMUSG00000116788	processed_pseudogene	Gm5674	ENSMUST00000231490	processed_pseudogene		16	-1	57769248	471
ENSMUSG00000022757	protein_coding	Tfg	ENSMUST00000127994	protein_coding		16	-1	56705694	945
ENSMUSG00000069678	protein_coding	Pcgf1	ENSMUST00000165164	protein_coding	principal1	6	1	83078346	918
ENSMUSG00000081465	processed_pseudogene	Gm12884	ENSMUST00000120371	processed_pseudogene		4	1	121381429	325
ENSMUSG00000025787	protein_coding	Tgm4	ENSMUST00000215247	protein_coding		9	1	123034743	951
ENSMUSG00000100304	processed_pseudogene	Gm28190	ENSMUST00000189766	processed_pseudogene		1	-1	112966931	722
ENSMUSG00000046985	protein_coding	Tapt1	ENSMUST00000197266	nonsense_mediated_decay		5	-1	44218212	779
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000101638	protein_coding	principal4	11	-1	3409174	3514
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000072692	protein_coding	alternative2	15	-1	76198209	14944
ENSMUSG00000046985	protein_coding	Tapt1	ENSMUST00000198391	retained_intron		5	-1	44204343	604
ENSMUSG00000081667	unprocessed_pseudogene	Gm12883	ENSMUST00000117867	unprocessed_pseudogene		4	1	121392992	364
ENSMUSG00000036073	protein_coding	Galt	ENSMUST00000135734	processed_transcript		4	1	41755253	674
ENSMUSG00000022757	protein_coding	Tfg	ENSMUST00000121554	processed_transcript		16	-1	56717311	716
ENSMUSG00000101453	lincRNA	Gm28189	ENSMUST00000190085	lincRNA		1	1	113289340	571
ENSMUSG00000108598	unprocessed_pseudogene	Gm44665	ENSMUST00000205381	unprocessed_pseudogene		11	1	73718203	251
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000148771	processed_transcript		11	-1	3352817	716
ENSMUSG00000046985	protein_coding	Tapt1	ENSMUST00000199265	retained_intron		5	-1	44204513	736
ENSMUSG00000025787	protein_coding	Tgm4	ENSMUST00000128572	retained_intron		9	1	123040432	1027
ENSMUSG00000022757	protein_coding	Tfg	ENSMUST00000136394	protein_coding		16	-1	56712976	575
ENSMUSG00000021804	protein_coding	Rgr	ENSMUST00000225634	processed_transcript		14	-1	37044708	572
ENSMUSG00000046985	protein_coding	Tapt1	ENSMUST00000196151	retained_intron		5	-1	44226626	619
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000142926	processed_transcript		11	-1	3355868	949
ENSMUSG00000025787	protein_coding	Tgm4	ENSMUST00000214552	retained_intron		9	1	123061855	953
ENSMUSG00000022757	protein_coding	Tfg	ENSMUST00000128551	protein_coding		16	-1	56717360	482
ENSMUSG00000080781	polymorphic_pseudogene	Olfr388-ps1	ENSMUST00000118336	polymorphic_pseudogene	principal1	11	-1	73727511	2129
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000123689	processed_transcript		11	-1	3356203	382
ENSMUSG00000025730	protein_coding	Rab40c	ENSMUST00000167626	protein_coding	principal1	17	-1	25919652	2506
ENSMUSG00000022757	protein_coding	Tfg	ENSMUST00000141404	protein_coding		16	-1	56717182	356
ENSMUSG00000116770	lincRNA	Gm49576	ENSMUST00000231442	lincRNA		16	-1	58006023	963
ENSMUSG00000104784	antisense	Gm42984	ENSMUST00000195990	antisense		5	1	44226587	987
ENSMUSG00000021804	protein_coding	Rgr	ENSMUST00000224506	processed_transcript		14	-1	37044926	584
ENSMUSG00000025730	protein_coding	Rab40c	ENSMUST00000166619	processed_transcript		17	-1	25913632	2238
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000125832	processed_transcript		11	-1	3409174	613
ENSMUSG00000111789	processed_transcript	Gm49323	ENSMUST00000217036	processed_transcript		9	1	123021418	607
ENSMUSG00000104285	TEC	Gm37458	ENSMUST00000194055	TEC		16	1	57902933	410
ENSMUSG00000105503	antisense	Gm42982	ENSMUST00000198574	antisense		5	1	44219683	687
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000132479	processed_transcript		11	-1	3356760	465
ENSMUSG00000021804	protein_coding	Rgr	ENSMUST00000225229	nonsense_mediated_decay		14	-1	37048947	648
ENSMUSG00000116630	processed_pseudogene	Rpl7a-ps4	ENSMUST00000231763	processed_pseudogene		16	-1	57897597	792
ENSMUSG00000025730	protein_coding	Rab40c	ENSMUST00000164982	protein_coding		17	-1	25919506	789
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000148091	processed_transcript		11	-1	3369162	473
ENSMUSG00000021804	protein_coding	Rgr	ENSMUST00000225403	nonsense_mediated_decay		14	-1	37048950	633
ENSMUSG00000105519	TEC	E430021H15Rik	ENSMUST00000198875	TEC		5	-1	44217259	3459
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000147344	processed_transcript		11	-1	3371335	550
ENSMUSG00000116920	lincRNA	Gm49575	ENSMUST00000232651	lincRNA		16	1	57811487	808
ENSMUSG00000069678	protein_coding	Pcgf1	ENSMUST00000176027	nonsense_mediated_decay		6	1	83078630	731
ENSMUSG00000102105	processed_pseudogene	Gm17946	ENSMUST00000186856	processed_pseudogene		1	-1	113565983	538
ENSMUSG00000069678	protein_coding	Pcgf1	ENSMUST00000177177	protein_coding		6	1	83078630	854
ENSMUSG00000020451	protein_coding	Limk2	ENSMUST00000145223	processed_transcript		11	-1	3409189	400
ENSMUSG00000078576	protein_coding	Gm12886	ENSMUST00000106266	protein_coding	principal1	4	-1	121423099	1149
ENSMUSG00000003484	protein_coding	Cyp4f18	ENSMUST00000003574	protein_coding	principal1	8	-1	72009626	1702
ENSMUSG00000069678	protein_coding	Pcgf1	ENSMUST00000176089	protein_coding		6	1	83078691	492
ENSMUSG00000055240	protein_coding	Zfp101	ENSMUST00000173151	processed_transcript		17	-1	33394378	1428
ENSMUSG00000003484	protein_coding	Cyp4f18	ENSMUST00000141975	protein_coding		8	-1	71992915	603
ENSMUSG00000069678	protein_coding	Pcgf1	ENSMUST00000204211	retained_intron		6	1	83078718	580
ENSMUSG00000032377	protein_coding	Plscr4	ENSMUST00000034941	protein_coding	principal1	9	1	92457373	3204
ENSMUSG00000069678	protein_coding	Pcgf1	ENSMUST00000176372	retained_intron		6	1	83080020	426
ENSMUSG00000100645	protein_coding	Gm28576	ENSMUST00000189007	protein_coding	principal1	Y	1	7722941	919
ENSMUSG00000003484	protein_coding	Cyp4f18	ENSMUST00000125448	processed_transcript		8	-1	71993231	549
ENSMUSG00000025730	protein_coding	Rab40c	ENSMUST00000167018	protein_coding		17	-1	25919727	954
ENSMUSG00000069678	protein_coding	Pcgf1	ENSMUST00000092614	protein_coding		6	1	83078390	866
ENSMUSG00000100124	lincRNA	Gm28575	ENSMUST00000188234	lincRNA		Y	1	7768203	166
ENSMUSG00000019897	protein_coding	Ccdc59	ENSMUST00000020049	protein_coding	principal1	10	1	105841067	1813
ENSMUSG00000032377	protein_coding	Plscr4	ENSMUST00000143866	retained_intron		9	1	92457394	1551
ENSMUSG00000101956	unprocessed_pseudogene	Gm28574	ENSMUST00000185757	unprocessed_pseudogene		Y	-1	7810101	699
ENSMUSG00000025730	protein_coding	Rab40c	ENSMUST00000172168	processed_transcript		17	-1	25919690	373
ENSMUSG00000082122	processed_pseudogene	Gm11809	ENSMUST00000120923	processed_pseudogene		4	-1	8673582	950
ENSMUSG00000025730	protein_coding	Rab40c	ENSMUST00000164738	protein_coding		17	-1	25919711	451
ENSMUSG00000052013	protein_coding	Btla	ENSMUST00000102802	protein_coding	alternative2	16	1	45224315	3251
ENSMUSG00000025730	protein_coding	Rab40c	ENSMUST00000026826	protein_coding	principal1	17	-1	25919714	2466
ENSMUSG00000101351	processed_pseudogene	Gm28573	ENSMUST00000187821	processed_pseudogene		Y	-1	7823298	380
ENSMUSG00000051920	protein_coding	Rspo2	ENSMUST00000226810	protein_coding	principal1	15	-1	43170826	3091
ENSMUSG00000025730	protein_coding	Rab40c	ENSMUST00000179998	protein_coding	principal1	17	-1	25919642	2456
ENSMUSG00000086670	processed_pseudogene	Gm13194	ENSMUST00000142299	processed_pseudogene		2	1	4942174	311
ENSMUSG00000019897	protein_coding	Ccdc59	ENSMUST00000133538	retained_intron		10	1	105841067	4314
ENSMUSG00000057580	transcribed_processed_pseudogene	Cox7c-ps1	ENSMUST00000170379	processed_transcript		17	1	25901856	372
ENSMUSG00000057580	transcribed_processed_pseudogene	Cox7c-ps1	ENSMUST00000078252	transcribed_processed_pseudogene		17	1	25901862	192
ENSMUSG00000019897	protein_coding	Ccdc59	ENSMUST00000155406	retained_intron		10	1	105841504	511
ENSMUSG00000112820	TEC	Gm48298	ENSMUST00000218986	TEC		10	-1	105808867	2330
ENSMUSG00000084862	antisense	Gm16278	ENSMUST00000148064	antisense		17	1	25919089	2071
ENSMUSG00000038354	protein_coding	Ankrd35	ENSMUST00000048427	protein_coding	principal1	3	1	96670131	4052
ENSMUSG00000051920	protein_coding	Rspo2	ENSMUST00000063492	protein_coding	principal1	15	-1	43170818	3338
ENSMUSG00000036744	protein_coding	Olfr701	ENSMUST00000166880	protein_coding	principal1	7	1	106814129	1444
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000165449	retained_intron		7	-1	110614914	2961
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000171378	retained_intron		7	-1	110614896	2694
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000164559	protein_coding		7	-1	110442293	530
ENSMUSG00000022972	protein_coding	Cfap298	ENSMUST00000023694	protein_coding	principal1	16	-1	90935114	1430
ENSMUSG00000051920	protein_coding	Rspo2	ENSMUST00000226402	retained_intron		15	-1	43170822	3259
ENSMUSG00000090113	protein_coding	Nhlrc4	ENSMUST00000085027	protein_coding	principal1	17	-1	25944932	2142
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000167880	retained_intron		7	-1	110614882	4280
ENSMUSG00000022972	protein_coding	Cfap298	ENSMUST00000129345	protein_coding		16	-1	90929983	489
ENSMUSG00000026360	protein_coding	Rgs2	ENSMUST00000127206	protein_coding	principal1	1	-1	144004161	3021
ENSMUSG00000099610	processed_pseudogene	Gm37545	ENSMUST00000186512	processed_pseudogene		9	-1	92540083	148
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000171218	protein_coding		7	-1	110614905	1476
ENSMUSG00000052013	protein_coding	Btla	ENSMUST00000063654	protein_coding	principal4	16	1	45224337	1598
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000166885	protein_coding		7	-1	110462932	595
ENSMUSG00000022972	protein_coding	Cfap298	ENSMUST00000125519	nonsense_mediated_decay		16	-1	90934927	1014
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000211732	retained_intron		7	-1	110449720	2770
ENSMUSG00000055240	protein_coding	Zfp101	ENSMUST00000167107	protein_coding	principal1	17	-1	33394641	2659
ENSMUSG00000103622	TEC	Gm38391	ENSMUST00000191720	TEC		9	-1	92542869	4069
ENSMUSG00000022972	protein_coding	Cfap298	ENSMUST00000231711	retained_intron		16	-1	90927505	426
ENSMUSG00000022972	protein_coding	Cfap298	ENSMUST00000149833	protein_coding		16	-1	90934723	597
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000167652	nonsense_mediated_decay		7	-1	110614761	404
ENSMUSG00000090113	protein_coding	Nhlrc4	ENSMUST00000159540	processed_transcript		17	-1	25944961	379
ENSMUSG00000085069	antisense	Prdm16os	ENSMUST00000136217	antisense		4	1	154637576	3542
ENSMUSG00000026360	protein_coding	Rgs2	ENSMUST00000027606	nonsense_mediated_decay		1	-1	144004135	763
ENSMUSG00000052013	protein_coding	Btla	ENSMUST00000231703	processed_transcript		16	1	45250371	502
ENSMUSG00000090113	protein_coding	Nhlrc4	ENSMUST00000162078	processed_transcript		17	-1	25944831	224
ENSMUSG00000026360	protein_coding	Rgs2	ENSMUST00000153527	protein_coding		1	-1	144004032	588
ENSMUSG00000022972	protein_coding	Cfap298	ENSMUST00000142340	protein_coding		16	-1	90934506	560
ENSMUSG00000059776	processed_pseudogene	Rpl13-ps6	ENSMUST00000079761	processed_pseudogene		3	1	58987170	636
ENSMUSG00000042607	protein_coding	Asb4	ENSMUST00000043294	protein_coding	principal1	6	1	5383386	3286
ENSMUSG00000038371	protein_coding	Sbf2	ENSMUST00000033058	protein_coding	principal2	7	-1	110614920	7154
ENSMUSG00000022972	protein_coding	Cfap298	ENSMUST00000131583	processed_transcript		16	-1	90934826	374
ENSMUSG00000098424	lincRNA	Gm27202	ENSMUST00000183838	lincRNA		4	-1	154645701	512
ENSMUSG00000026360	protein_coding	Rgs2	ENSMUST00000134817	retained_intron		1	-1	144004121	650
ENSMUSG00000060777	processed_pseudogene	Gm10087	ENSMUST00000167650	processed_pseudogene		7	1	110526792	330
ENSMUSG00000021113	protein_coding	Snapc1	ENSMUST00000222025	nonsense_mediated_decay		12	1	73964481	449
ENSMUSG00000036744	protein_coding	Olfr701	ENSMUST00000075414	protein_coding	principal1	7	1	106814144	3063
ENSMUSG00000091117	processed_pseudogene	Gm9064	ENSMUST00000163579	processed_pseudogene		7	1	110425037	566
ENSMUSG00000116607	bidirectional_promoter_lncRNA	4930534H18Rik	ENSMUST00000232326	bidirectional_promoter_lncRNA		16	1	90934967	662
ENSMUSG00000055240	protein_coding	Zfp101	ENSMUST00000174512	protein_coding		17	-1	33394623	6095
ENSMUSG00000042607	protein_coding	Asb4	ENSMUST00000183358	protein_coding		6	1	5390427	1143
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000131237	protein_coding	alternative2	8	1	71951038	2689
ENSMUSG00000090855	processed_pseudogene	Gm17219	ENSMUST00000168439	processed_pseudogene		7	1	110522066	593
ENSMUSG00000086810	processed_transcript	Gm13110	ENSMUST00000138077	processed_transcript		4	-1	154655318	3414
ENSMUSG00000038354	protein_coding	Ankrd35	ENSMUST00000122960	nonsense_mediated_decay		3	1	96670327	3295
ENSMUSG00000100412	unprocessed_pseudogene	Gm28572	ENSMUST00000187444	unprocessed_pseudogene		Y	-1	7846611	318
ENSMUSG00000055240	protein_coding	Zfp101	ENSMUST00000174417	protein_coding		17	-1	33394357	600
ENSMUSG00000036744	protein_coding	Olfr701	ENSMUST00000217739	protein_coding	principal1	7	1	106814601	4100
ENSMUSG00000038354	protein_coding	Ankrd35	ENSMUST00000130429	processed_transcript		3	1	96680093	504
ENSMUSG00000026837	protein_coding	Col5a1	ENSMUST00000028280	protein_coding	principal1	2	1	27886425	8406
ENSMUSG00000094349	protein_coding	Gm8082	ENSMUST00000165349	protein_coding	principal1	14	-1	42993624	1403
ENSMUSG00000082795	processed_pseudogene	Gm13193	ENSMUST00000117275	processed_pseudogene		2	-1	4956293	225
ENSMUSG00000055240	protein_coding	Zfp101	ENSMUST00000183047	processed_transcript		17	-1	33394605	353
ENSMUSG00000091286	unprocessed_pseudogene	Gm3111	ENSMUST00000167426	unprocessed_pseudogene		14	-1	43002836	490
ENSMUSG00000026837	protein_coding	Col5a1	ENSMUST00000145423	protein_coding		2	1	28017441	1049
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000138304	nonsense_mediated_decay		8	1	71951066	2307
ENSMUSG00000036073	protein_coding	Galt	ENSMUST00000151490	processed_transcript		4	1	41755253	1218
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000107044	protein_coding	alternative1	7	-1	100658456	1806
ENSMUSG00000102026	lincRNA	Gm28571	ENSMUST00000188922	lincRNA		Y	-1	7851362	2168
ENSMUSG00000102886	lincRNA	Gm30667	ENSMUST00000193120	lincRNA		3	-1	18461254	870
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000136516	protein_coding		8	1	71951067	601
ENSMUSG00000026837	protein_coding	Col5a1	ENSMUST00000238851	protein_coding		2	1	28022286	1281
ENSMUSG00000099800	lincRNA	Gm28570	ENSMUST00000188300	lincRNA		Y	1	7884460	1495
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000107043	protein_coding		7	-1	100658364	931
ENSMUSG00000092519	protein_coding	Actl9	ENSMUST00000174088	protein_coding	principal1	17	1	33432896	1373
ENSMUSG00000102699	lincRNA	4930433B08Rik	ENSMUST00000192010	lincRNA		3	-1	18480477	644
ENSMUSG00000117495	protein_coding	Gm4125	ENSMUST00000234517	protein_coding	principal1	17	-1	33468686	837
ENSMUSG00000036009	protein_coding	Mettl25	ENSMUST00000046638	protein_coding	principal1	10	-1	105841378	2033
ENSMUSG00000099861	protein_coding	Gm29049	ENSMUST00000185705	protein_coding	principal1	Y	-1	7997168	1224
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000135255	retained_intron		7	-1	100653791	504
ENSMUSG00000085766	processed_transcript	2810430I11Rik	ENSMUST00000154246	processed_transcript		2	-1	27887052	3416
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000151123	protein_coding		7	-1	100662315	937
ENSMUSG00000069188	processed_pseudogene	Gm13192	ENSMUST00000101199	processed_pseudogene		2	-1	4959752	208
ENSMUSG00000022983	protein_coding	Scaf4	ENSMUST00000163419	protein_coding	alternative2	16	-1	90284308	4175
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000145256	nonsense_mediated_decay		8	1	71951070	504
ENSMUSG00000090069	antisense	E430024P14Rik	ENSMUST00000160177	antisense		17	-1	7946426	2050
ENSMUSG00000086560	processed_transcript	Gm13372	ENSMUST00000123129	processed_transcript		2	-1	28030437	688
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000139708	protein_coding		7	-1	100657103	516
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000109997	protein_coding	principal2	8	1	71951071	2713
ENSMUSG00000096654	processed_pseudogene	Mup-ps29	ENSMUST00000122281	processed_pseudogene		4	1	60384494	202
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000138830	protein_coding		7	-1	100658422	526
ENSMUSG00000022983	protein_coding	Scaf4	ENSMUST00000232371	protein_coding	alternative2	16	-1	90284503	4367
ENSMUSG00000026785	protein_coding	Pkn3	ENSMUST00000125346	protein_coding		2	1	30077684	804
ENSMUSG00000090069	antisense	E430024P14Rik	ENSMUST00000160545	antisense		17	-1	7945889	2833
ENSMUSG00000095324	protein_coding	Gm20825	ENSMUST00000178149	protein_coding	principal1	Y	-1	8071507	1226
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000208812	protein_coding		7	-1	100662356	691
ENSMUSG00000030701	protein_coding	Plekhb1	ENSMUST00000116287	protein_coding	alternative1	7	-1	100658456	1911
ENSMUSG00000095324	protein_coding	Gm20825	ENSMUST00000178396	protein_coding	principal1	Y	-1	8069993	684
ENSMUSG00000090069	antisense	E430024P14Rik	ENSMUST00000159947	antisense		17	-1	7946352	786
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000139781	processed_transcript		8	1	71951077	416
ENSMUSG00000101616	unprocessed_pseudogene	Gm29047	ENSMUST00000189816	unprocessed_pseudogene		Y	1	8087690	108
ENSMUSG00000108060	processed_transcript	4921529L05Rik	ENSMUST00000204478	processed_transcript		6	1	53978691	1520
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000205573	protein_coding	principal1	7	1	24546289	2528
ENSMUSG00000108060	processed_transcript	4921529L05Rik	ENSMUST00000203792	processed_transcript		6	1	53978701	548
ENSMUSG00000103402	TEC	Gm37930	ENSMUST00000194308	TEC		1	1	69770868	1886
ENSMUSG00000036073	protein_coding	Galt	ENSMUST00000132760	processed_transcript		4	1	41755758	829
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000144807	processed_transcript		8	1	71951080	701
ENSMUSG00000108060	processed_transcript	4921529L05Rik	ENSMUST00000204733	processed_transcript		6	1	53978729	192
ENSMUSG00000041044	protein_coding	Lrit1	ENSMUST00000120052	protein_coding	principal1	14	1	37054830	4325
ENSMUSG00000036073	protein_coding	Galt	ENSMUST00000150908	processed_transcript		4	1	41755840	723
ENSMUSG00000036073	protein_coding	Galt	ENSMUST00000147719	processed_transcript		4	1	41755961	876
ENSMUSG00000100312	transcribed_unprocessed_pseudogene	Gm29048	ENSMUST00000190399	processed_transcript		Y	-1	8102756	1601
ENSMUSG00000108060	processed_transcript	4921529L05Rik	ENSMUST00000203047	processed_transcript		6	1	54009712	1997
ENSMUSG00000100312	transcribed_unprocessed_pseudogene	Gm29048	ENSMUST00000185342	transcribed_unprocessed_pseudogene		Y	-1	8101164	615
ENSMUSG00000083293	processed_pseudogene	Mup-ps28	ENSMUST00000120686	processed_pseudogene		4	1	60389861	289
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000147033	processed_transcript		8	1	71951081	422
ENSMUSG00000022983	protein_coding	Scaf4	ENSMUST00000039280	protein_coding	principal3	16	-1	90284425	4266
ENSMUSG00000036009	protein_coding	Mettl25	ENSMUST00000176924	nonsense_mediated_decay		10	-1	105841380	2145
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000205561	retained_intron		7	1	24547198	1203
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000206889	processed_transcript		7	1	24547201	432
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000132848	protein_coding		8	1	71951091	781
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000206620	retained_intron		7	1	24547285	828
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000097722	protein_coding	alternative2	1	1	58711551	1771
ENSMUSG00000103729	processed_pseudogene	Gm37098	ENSMUST00000192290	processed_pseudogene		3	1	28245523	244
ENSMUSG00000109716	lincRNA	Gm42196	ENSMUST00000209618	lincRNA		3	1	28176553	730
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000136878	processed_transcript		8	1	71951091	1015
ENSMUSG00000022983	protein_coding	Scaf4	ENSMUST00000231594	retained_intron		16	-1	90247216	1165
ENSMUSG00000052446	protein_coding	Zfp961	ENSMUST00000151168	processed_transcript		8	1	71953447	698
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000206067	retained_intron		7	1	24547333	760
ENSMUSG00000036009	protein_coding	Mettl25	ENSMUST00000176040	nonsense_mediated_decay		10	-1	105841371	681
ENSMUSG00000110529	TEC	Gm45694	ENSMUST00000212022	TEC		8	1	71983903	3251
ENSMUSG00000022983	protein_coding	Scaf4	ENSMUST00000231443	retained_intron		16	-1	90243070	429
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000205564	retained_intron		7	1	24565569	922
ENSMUSG00000107432	processed_pseudogene	Gm36189	ENSMUST00000204113	processed_pseudogene		6	1	88882655	523
ENSMUSG00000036009	protein_coding	Mettl25	ENSMUST00000176830	processed_transcript		10	-1	105841211	519
ENSMUSG00000022983	protein_coding	Scaf4	ENSMUST00000231572	retained_intron		16	-1	90258456	508
ENSMUSG00000036073	protein_coding	Galt	ENSMUST00000130698	processed_transcript		4	1	41756210	1007
ENSMUSG00000083081	processed_pseudogene	Gm13223	ENSMUST00000118609	processed_pseudogene		4	1	145455633	747
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000206538	retained_intron		7	1	24567362	903
ENSMUSG00000022983	protein_coding	Scaf4	ENSMUST00000231776	retained_intron		16	-1	90258800	527
ENSMUSG00000036073	protein_coding	Galt	ENSMUST00000154275	processed_transcript		4	1	41756254	900
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000077871	protein_coding	alternative2	10	1	119453830	3720
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000205804	retained_intron		7	1	24569702	870
ENSMUSG00000115039	processed_pseudogene	Gm7043	ENSMUST00000228135	processed_pseudogene		17	-1	3462332	533
ENSMUSG00000104682	TEC	Gm42636	ENSMUST00000197174	TEC		5	1	145292770	2239
ENSMUSG00000036073	protein_coding	Galt	ENSMUST00000133106	processed_transcript		4	1	41756262	857
ENSMUSG00000036699	protein_coding	Zcchc12	ENSMUST00000115258	protein_coding	principal1	X	1	36195904	2181
ENSMUSG00000052616	protein_coding	Terb1	ENSMUST00000064576	protein_coding	principal1	8	-1	104509887	2950
ENSMUSG00000071276	protein_coding	Fpr-rs7	ENSMUST00000095637	protein_coding	principal1	17	-1	20114226	1017
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000206429	retained_intron		7	1	24569857	638
ENSMUSG00000021113	protein_coding	Snapc1	ENSMUST00000021532	protein_coding	principal1	12	1	73964526	6275
ENSMUSG00000042066	protein_coding	Tmcc2	ENSMUST00000045473	protein_coding		1	-1	132391281	3410
ENSMUSG00000117169	unprocessed_pseudogene	Vmn1r-ps139	ENSMUST00000233358	unprocessed_pseudogene		17	-1	20122549	800
ENSMUSG00000022155	protein_coding	Mroh2b	ENSMUST00000226277	processed_transcript		15	1	4898737	1333
ENSMUSG00000021113	protein_coding	Snapc1	ENSMUST00000220882	protein_coding		12	1	73970253	1840
ENSMUSG00000024240	protein_coding	Epc1	ENSMUST00000115870	protein_coding		18	-1	6516108	3817
ENSMUSG00000114702	processed_transcript	Gm40828	ENSMUST00000226034	antisense		13	-1	21485049	349
ENSMUSG00000114702	processed_transcript	Gm40828	ENSMUST00000238645	retained_intron		13	-1	21479443	1821
ENSMUSG00000036699	protein_coding	Zcchc12	ENSMUST00000048067	protein_coding	principal1	X	1	36195946	2089
ENSMUSG00000021113	protein_coding	Snapc1	ENSMUST00000221556	nonsense_mediated_decay		12	1	73971894	837
ENSMUSG00000114702	processed_transcript	Gm40828	ENSMUST00000076238	processed_transcript		13	-1	21479441	345
ENSMUSG00000039737	protein_coding	Prkrip1	ENSMUST00000151786	protein_coding	principal1	5	-1	136198963	3893
ENSMUSG00000025785	protein_coding	Exosc7	ENSMUST00000026891	protein_coding	principal1	9	1	123113215	1053
ENSMUSG00000042066	protein_coding	Tmcc2	ENSMUST00000136828	protein_coding	alternative1	1	-1	132367072	2771
ENSMUSG00000071275	protein_coding	Fpr-rs6	ENSMUST00000095636	protein_coding	principal1	17	-1	20183097	1020
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000206153	processed_transcript		7	1	24570530	487
ENSMUSG00000021113	protein_coding	Snapc1	ENSMUST00000220909	protein_coding		12	1	73971896	699
ENSMUSG00000066457	processed_pseudogene	S100a11-ps	ENSMUST00000181735	processed_pseudogene		12	1	73961142	306
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000114313	protein_coding	principal2	1	1	58711560	6572
ENSMUSG00000025785	protein_coding	Exosc7	ENSMUST00000216412	retained_intron		9	1	123113242	3890
ENSMUSG00000042066	protein_coding	Tmcc2	ENSMUST00000138717	retained_intron		1	-1	132367886	4004
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000205575	retained_intron		7	1	24571714	872
ENSMUSG00000052912	transcribed_processed_pseudogene	Smarca5-ps	ENSMUST00000171805	processed_transcript		4	1	145464204	1284
ENSMUSG00000085253	antisense	Gm16833	ENSMUST00000189204	antisense		9	1	9236288	672
ENSMUSG00000036699	protein_coding	Zcchc12	ENSMUST00000115257	protein_coding	principal1	X	1	36195959	2051
ENSMUSG00000114046	protein_coding	Snapc1l	ENSMUST00000221833	protein_coding	principal1	12	1	73937653	445
ENSMUSG00000085253	antisense	Gm16833	ENSMUST00000150263	antisense		9	1	9260683	201
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000205453	processed_transcript		7	1	24572226	443
ENSMUSG00000042066	protein_coding	Tmcc2	ENSMUST00000142609	protein_coding	principal2	1	-1	132367887	2769
ENSMUSG00000052912	transcribed_processed_pseudogene	Smarca5-ps	ENSMUST00000121843	transcribed_processed_pseudogene		4	1	145464298	3123
ENSMUSG00000039737	protein_coding	Prkrip1	ENSMUST00000040980	processed_transcript		5	-1	136198910	626
ENSMUSG00000036699	protein_coding	Zcchc12	ENSMUST00000115256	protein_coding	principal1	X	1	36195986	2197
ENSMUSG00000117068	transcribed_unprocessed_pseudogene	Vmn1r-ps140	ENSMUST00000236242	processed_transcript		17	-1	20200721	9960
ENSMUSG00000117068	transcribed_unprocessed_pseudogene	Vmn1r-ps140	ENSMUST00000233393	transcribed_unprocessed_pseudogene		17	-1	20192460	806
ENSMUSG00000037251	protein_coding	Pomk	ENSMUST00000061850	protein_coding	principal1	8	-1	25994133	3613
ENSMUSG00000010721	protein_coding	Lmbr1	ENSMUST00000055195	protein_coding	principal1	5	-1	29378384	4926
ENSMUSG00000019577	protein_coding	Pdk4	ENSMUST00000019721	protein_coding	principal1	6	-1	5496309	3484
ENSMUSG00000042066	protein_coding	Tmcc2	ENSMUST00000132435	protein_coding		1	-1	132390318	3514
ENSMUSG00000087076	processed_pseudogene	Gm13229	ENSMUST00000118238	processed_pseudogene		4	-1	145470050	340
ENSMUSG00000051768	protein_coding	Xrcc1	ENSMUST00000063249	protein_coding	principal1	7	1	24547150	2155
ENSMUSG00000039737	protein_coding	Prkrip1	ENSMUST00000123921	nonsense_mediated_decay		5	-1	136197822	447
ENSMUSG00000025785	protein_coding	Exosc7	ENSMUST00000215590	processed_transcript		9	1	123113247	535
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000114309	protein_coding		1	1	58713294	2010
ENSMUSG00000042066	protein_coding	Tmcc2	ENSMUST00000125439	processed_transcript		1	-1	132364948	437
ENSMUSG00000039737	protein_coding	Prkrip1	ENSMUST00000149151	protein_coding		5	-1	136198908	505
ENSMUSG00000054931	protein_coding	Zkscan4	ENSMUST00000062609	protein_coding	principal1	13	1	21478907	2400
ENSMUSG00000019577	protein_coding	Pdk4	ENSMUST00000203347	protein_coding		6	-1	5496261	573
ENSMUSG00000025785	protein_coding	Exosc7	ENSMUST00000159376	retained_intron		9	1	123113258	711
ENSMUSG00000019577	protein_coding	Pdk4	ENSMUST00000134068	retained_intron		6	-1	5496275	412
ENSMUSG00000052616	protein_coding	Terb1	ENSMUST00000161520	nonsense_mediated_decay		8	-1	104509883	2840
ENSMUSG00000090079	antisense	Gm15849	ENSMUST00000159257	antisense		1	1	132381129	335
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000123553	processed_transcript		1	1	58713302	1100
ENSMUSG00000024240	protein_coding	Epc1	ENSMUST00000028100	protein_coding	principal1	18	-1	6490856	3965
ENSMUSG00000025785	protein_coding	Exosc7	ENSMUST00000215377	protein_coding		9	1	123113302	432
ENSMUSG00000054931	protein_coding	Zkscan4	ENSMUST00000225845	protein_coding		13	1	21478971	1506
ENSMUSG00000100258	unprocessed_pseudogene	Gm29045	ENSMUST00000187278	unprocessed_pseudogene		Y	-1	8138136	698
ENSMUSG00000031666	protein_coding	Rbl2	ENSMUST00000034091	protein_coding	principal3	8	1	91070057	4925
ENSMUSG00000094090	processed_pseudogene	Gm8494	ENSMUST00000178171	processed_pseudogene		5	1	146574888	1233
ENSMUSG00000025785	protein_coding	Exosc7	ENSMUST00000161569	processed_transcript		9	1	123126385	680
ENSMUSG00000052616	protein_coding	Terb1	ENSMUST00000159713	nonsense_mediated_decay		8	-1	104509882	2695
ENSMUSG00000010721	protein_coding	Lmbr1	ENSMUST00000196321	protein_coding		5	-1	29378302	3422
ENSMUSG00000053898	protein_coding	Ech1	ENSMUST00000154839	retained_intron		7	1	28825217	833
ENSMUSG00000101229	lincRNA	Gm29046	ENSMUST00000188653	lincRNA		Y	-1	8147387	2167
ENSMUSG00000010721	protein_coding	Lmbr1	ENSMUST00000198105	protein_coding		5	-1	29378384	2274
ENSMUSG00000031666	protein_coding	Rbl2	ENSMUST00000210533	retained_intron		8	1	91070070	932
ENSMUSG00000024240	protein_coding	Epc1	ENSMUST00000124926	processed_transcript		18	-1	6441894	721
ENSMUSG00000010721	protein_coding	Lmbr1	ENSMUST00000200564	protein_coding		5	-1	29378330	1598
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000069333	protein_coding	principal2	1	1	58713317	3163
ENSMUSG00000031666	protein_coding	Rbl2	ENSMUST00000141351	retained_intron		8	1	91070094	1725
ENSMUSG00000101456	lincRNA	Gm29043	ENSMUST00000186371	lincRNA		Y	1	8196252	623
ENSMUSG00000025785	protein_coding	Exosc7	ENSMUST00000214741	retained_intron		9	1	123127445	1107
ENSMUSG00000024240	protein_coding	Epc1	ENSMUST00000050542	protein_coding		18	-1	6490856	565
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000189858	retained_intron		1	1	58713886	3677
ENSMUSG00000010721	protein_coding	Lmbr1	ENSMUST00000200149	nonsense_mediated_decay		5	-1	29292214	714
ENSMUSG00000031666	protein_coding	Rbl2	ENSMUST00000211136	protein_coding	alternative2	8	1	91070122	4504
ENSMUSG00000111490	TEC	Gm47159	ENSMUST00000216113	TEC		9	1	123138466	1176
ENSMUSG00000117718	lincRNA	1500032F14Rik	ENSMUST00000236420	lincRNA		19	-1	4257651	460
ENSMUSG00000036381	protein_coding	P2ry14	ENSMUST00000197841	protein_coding		3	-1	59130762	2476
ENSMUSG00000026031	protein_coding	Cflar	ENSMUST00000123032	processed_transcript		1	1	58730552	623
ENSMUSG00000079598	protein_coding	Clec2l	ENSMUST00000114874	protein_coding	principal1	6	1	38663067	1431
ENSMUSG00000037933	protein_coding	Bicd2	ENSMUST00000048544	protein_coding	principal4	13	1	49341585	6309
ENSMUSG00000052616	protein_coding	Terb1	ENSMUST00000162014	processed_transcript		8	-1	104509910	2810
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000102729	protein_coding	principal2	4	1	109280268	5190
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000041962	protein_coding	alternative2	10	1	119453830	5343
ENSMUSG00000041117	protein_coding	Ccdc8	ENSMUST00000094805	protein_coding	principal1	7	1	16992708	4809
ENSMUSG00000031666	protein_coding	Rbl2	ENSMUST00000209518	protein_coding	alternative2	8	1	91070158	4792
ENSMUSG00000010721	protein_coding	Lmbr1	ENSMUST00000198367	processed_transcript		5	-1	29361090	734
ENSMUSG00000082303	processed_pseudogene	Gm13633	ENSMUST00000120668	processed_pseudogene		2	1	70856689	898
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000176251	nonsense_mediated_decay		4	1	109280303	2963
ENSMUSG00000079598	protein_coding	Clec2l	ENSMUST00000238216	processed_transcript		6	1	38663879	411
ENSMUSG00000073471	protein_coding	Rsph3a	ENSMUST00000232223	protein_coding	alternative2	17	1	7945614	2225
ENSMUSG00000085868	lincRNA	Gm13632	ENSMUST00000150119	lincRNA		2	1	70877829	384
ENSMUSG00000110278	lincRNA	Gm5608	ENSMUST00000210253	lincRNA		8	-1	13547028	2290
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000177089	protein_coding		4	1	109280376	346
ENSMUSG00000060181	protein_coding	Slc35e3	ENSMUST00000079041	protein_coding	principal1	10	-1	117746365	3489
ENSMUSG00000010721	protein_coding	Lmbr1	ENSMUST00000179191	protein_coding		5	-1	29378390	4836
ENSMUSG00000091670	protein_coding	Vmn2r105	ENSMUST00000233461	protein_coding	alternative2	17	-1	20235052	8666
ENSMUSG00000021290	protein_coding	Atp5mpl	ENSMUST00000223435	retained_intron		12	-1	111962708	440
ENSMUSG00000091670	protein_coding	Vmn2r105	ENSMUST00000233468	protein_coding		17	-1	20235052	7874
ENSMUSG00000026668	protein_coding	Ucma	ENSMUST00000127282	processed_transcript		2	1	4976125	430
ENSMUSG00000091670	protein_coding	Vmn2r105	ENSMUST00000232768	protein_coding		17	-1	20235052	7784
ENSMUSG00000115756	processed_transcript	Gm49519	ENSMUST00000227235	processed_transcript		14	1	48518236	4414
ENSMUSG00000060181	protein_coding	Slc35e3	ENSMUST00000219482	processed_transcript		10	-1	117744942	666
ENSMUSG00000115756	processed_transcript	Gm49519	ENSMUST00000227146	processed_transcript		14	1	48521914	4178
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000175776	protein_coding	alternative2	4	1	109280412	2802
ENSMUSG00000091670	protein_coding	Vmn2r105	ENSMUST00000233950	protein_coding	alternative2	17	-1	20235052	8570
ENSMUSG00000115756	processed_transcript	Gm49519	ENSMUST00000227732	processed_transcript		14	1	48523633	1943
ENSMUSG00000091670	protein_coding	Vmn2r105	ENSMUST00000232803	protein_coding		17	-1	20235052	3720
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000132165	protein_coding	alternative2	4	1	109280412	2295
ENSMUSG00000106243	processed_pseudogene	Gm5050	ENSMUST00000197164	processed_pseudogene		5	-1	136211786	775
ENSMUSG00000091670	protein_coding	Vmn2r105	ENSMUST00000233786	protein_coding		17	-1	20235052	9899
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000150755	retained_intron		4	1	109304465	627
ENSMUSG00000091670	protein_coding	Vmn2r105	ENSMUST00000232877	protein_coding	alternative2	17	-1	20235047	8555
ENSMUSG00000115756	processed_transcript	Gm49519	ENSMUST00000226673	processed_transcript		14	1	48524594	826
ENSMUSG00000097685	antisense	Gm26646	ENSMUST00000180715	antisense		7	1	79916937	1490
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000141751	retained_intron		4	1	109309151	470
ENSMUSG00000031666	protein_coding	Rbl2	ENSMUST00000144190	retained_intron		8	1	91106534	863
ENSMUSG00000020644	protein_coding	Id2	ENSMUST00000221761	protein_coding	principal1	12	-1	25097140	1969
ENSMUSG00000025784	protein_coding	Clec3b	ENSMUST00000026890	protein_coding	principal1	9	1	123150946	992
ENSMUSG00000073471	protein_coding	Rsph3a	ENSMUST00000097423	protein_coding	principal2	17	1	7945653	2189
ENSMUSG00000097685	antisense	Gm26646	ENSMUST00000205705	antisense		7	1	79918969	439
ENSMUSG00000020644	protein_coding	Id2	ENSMUST00000222667	protein_coding		12	-1	25096087	958
ENSMUSG00000031666	protein_coding	Rbl2	ENSMUST00000145246	processed_transcript		8	1	91106571	545
ENSMUSG00000027359	protein_coding	Slc27a2	ENSMUST00000061491	protein_coding	principal1	2	1	126552407	2918
ENSMUSG00000091670	protein_coding	Vmn2r105	ENSMUST00000167382	protein_coding	principal2	17	-1	20234872	2583
ENSMUSG00000026785	protein_coding	Pkn3	ENSMUST00000148650	retained_intron		2	1	30077743	3460
ENSMUSG00000058755	protein_coding	Osm	ENSMUST00000075221	protein_coding	principal1	11	1	4236420	2272
ENSMUSG00000026785	protein_coding	Pkn3	ENSMUST00000150770	protein_coding		2	1	30078213	419
ENSMUSG00000038676	protein_coding	Ucn	ENSMUST00000043475	protein_coding	principal1	5	-1	31138829	504
ENSMUSG00000031666	protein_coding	Rbl2	ENSMUST00000147361	retained_intron		8	1	91112243	821
ENSMUSG00000027359	protein_coding	Slc27a2	ENSMUST00000126249	processed_transcript		2	1	126553590	393
ENSMUSG00000031666	protein_coding	Rbl2	ENSMUST00000130336	retained_intron		8	1	91113654	745
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000030281	protein_coding		4	1	109343059	2980
ENSMUSG00000020644	protein_coding	Id2	ENSMUST00000020974	protein_coding	principal1	12	-1	25096092	1270
ENSMUSG00000038676	protein_coding	Ucn	ENSMUST00000201184	protein_coding	principal1	5	-1	31138829	499
ENSMUSG00000027359	protein_coding	Slc27a2	ENSMUST00000141482	protein_coding		2	1	126556128	1478
ENSMUSG00000058755	protein_coding	Osm	ENSMUST00000131764	processed_transcript		11	1	4236420	773
ENSMUSG00000036381	protein_coding	P2ry14	ENSMUST00000065220	protein_coding	principal1	3	-1	59130624	1672
ENSMUSG00000031666	protein_coding	Rbl2	ENSMUST00000126689	retained_intron		8	1	91115129	547
ENSMUSG00000073471	protein_coding	Rsph3a	ENSMUST00000231845	processed_transcript		17	1	7945995	621
ENSMUSG00000027359	protein_coding	Slc27a2	ENSMUST00000150947	processed_transcript		2	1	126564760	1010
ENSMUSG00000110189	processed_pseudogene	Gm45665	ENSMUST00000210399	processed_pseudogene		8	1	91152207	168
ENSMUSG00000073471	protein_coding	Rsph3a	ENSMUST00000232627	retained_intron		17	1	7946061	353
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000147356	protein_coding	alternative2	10	1	119453830	4145
ENSMUSG00000073471	protein_coding	Rsph3a	ENSMUST00000231320	retained_intron		17	1	7952549	720
ENSMUSG00000035498	protein_coding	Cdcp1	ENSMUST00000148158	retained_intron		9	-1	123178106	3607
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000238454	nonsense_mediated_decay		10	1	119692054	1070
ENSMUSG00000051007	protein_coding	Gatd1	ENSMUST00000106008	protein_coding	principal1	7	-1	141414136	1898
ENSMUSG00000086584	antisense	Gm12002	ENSMUST00000153794	antisense		11	1	12314514	1803
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000238747	processed_transcript		10	1	119692054	1070
ENSMUSG00000036381	protein_coding	P2ry14	ENSMUST00000196081	protein_coding	principal1	3	-1	59153492	1615
ENSMUSG00000073471	protein_coding	Rsph3a	ENSMUST00000231900	protein_coding		17	1	7970222	424
ENSMUSG00000086584	antisense	Gm12002	ENSMUST00000143593	antisense		11	1	12314533	492
ENSMUSG00000099517	protein_coding	H3c8	ENSMUST00000080859	protein_coding	principal1	13	1	23535422	530
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000126015	retained_intron		4	1	109343253	1584
ENSMUSG00000086584	antisense	Gm12002	ENSMUST00000174550	antisense		11	1	12322275	923
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000105262	protein_coding	alternative2	10	1	119819389	4996
ENSMUSG00000037933	protein_coding	Bicd2	ENSMUST00000110084	protein_coding	alternative2	13	1	49341591	4488
ENSMUSG00000073471	protein_coding	Rsph3a	ENSMUST00000232233	processed_transcript		17	1	7975887	688
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000177192	protein_coding		4	1	109370548	906
ENSMUSG00000053898	protein_coding	Ech1	ENSMUST00000066264	protein_coding	principal1	7	1	28825217	1267
ENSMUSG00000109254	antisense	Gm44588	ENSMUST00000208401	antisense		7	1	119462821	545
ENSMUSG00000028552	protein_coding	Eps15	ENSMUST00000177140	processed_transcript		4	1	109370592	308
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000147454	protein_coding	alternative2	10	1	119819398	4520
ENSMUSG00000114456	protein_coding	H2bc9	ENSMUST00000224359	protein_coding	principal1	13	-1	23543392	1679
ENSMUSG00000053898	protein_coding	Ech1	ENSMUST00000127590	retained_intron		7	1	28825349	741
ENSMUSG00000074406	protein_coding	Zfp628	ENSMUST00000116354	protein_coding	principal1	7	1	4915217	3523
ENSMUSG00000036381	protein_coding	P2ry14	ENSMUST00000091112	protein_coding	principal1	3	-1	59130622	1795
ENSMUSG00000112937	lincRNA	Gm17746	ENSMUST00000223429	lincRNA		12	1	25129174	3772
ENSMUSG00000066721	protein_coding	Zfp575	ENSMUST00000094705	protein_coding	principal1	7	-1	24587641	2741
ENSMUSG00000053898	protein_coding	Ech1	ENSMUST00000124017	processed_transcript		7	1	28825958	422
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000087204	protein_coding	principal2	5	1	150259767	10893
ENSMUSG00000021290	protein_coding	Atp5mpl	ENSMUST00000021719	protein_coding	principal1	12	-1	111966977	366
ENSMUSG00000053898	protein_coding	Ech1	ENSMUST00000132376	protein_coding		7	1	28826204	673
ENSMUSG00000030703	protein_coding	Gdpd3	ENSMUST00000032944	protein_coding	principal1	7	1	126766334	1148
ENSMUSG00000026875	protein_coding	Traf1	ENSMUST00000172159	protein_coding	principal1	2	-1	34958163	3436
ENSMUSG00000036381	protein_coding	P2ry14	ENSMUST00000197220	protein_coding	principal1	3	-1	59131327	1684
ENSMUSG00000114033	lincRNA	Gm47705	ENSMUST00000222804	lincRNA		12	1	25181768	613
ENSMUSG00000037933	protein_coding	Bicd2	ENSMUST00000110085	protein_coding	alternative2	13	1	49341596	4588
ENSMUSG00000113587	lincRNA	Gm36287	ENSMUST00000223481	lincRNA		12	1	25150915	796
ENSMUSG00000053898	protein_coding	Ech1	ENSMUST00000143708	retained_intron		7	1	28830151	594
ENSMUSG00000053898	protein_coding	Ech1	ENSMUST00000137834	retained_intron		7	1	28831251	861
ENSMUSG00000036381	protein_coding	P2ry14	ENSMUST00000200358	protein_coding		3	-1	59131213	669
ENSMUSG00000037933	protein_coding	Bicd2	ENSMUST00000220723	protein_coding		13	1	49383089	431
ENSMUSG00000051007	protein_coding	Gatd1	ENSMUST00000156353	retained_intron		7	-1	141414090	2348
ENSMUSG00000021290	protein_coding	Atp5mpl	ENSMUST00000222874	protein_coding	principal1	12	-1	111966894	612
ENSMUSG00000036381	protein_coding	P2ry14	ENSMUST00000198838	protein_coding		3	-1	59131118	557
ENSMUSG00000051007	protein_coding	Gatd1	ENSMUST00000140337	retained_intron		7	-1	141409331	1024
ENSMUSG00000100210	protein_coding	H3c7	ENSMUST00000075558	protein_coding	principal1	13	1	23544052	1261
ENSMUSG00000026875	protein_coding	Traf1	ENSMUST00000028234	protein_coding	principal1	2	-1	34961585	2069
ENSMUSG00000021290	protein_coding	Atp5mpl	ENSMUST00000223191	protein_coding		12	-1	111966957	435
ENSMUSG00000050730	protein_coding	Arhgap42	ENSMUST00000093893	protein_coding	principal1	9	-1	9239101	6116
ENSMUSG00000022155	protein_coding	Mroh2b	ENSMUST00000045736	protein_coding	principal1	15	1	4899142	4829
ENSMUSG00000036381	protein_coding	P2ry14	ENSMUST00000200673	protein_coding		3	-1	59132462	339
ENSMUSG00000113745	processed_pseudogene	Gm19340	ENSMUST00000221995	processed_pseudogene		12	1	25282595	345
ENSMUSG00000021290	protein_coding	Atp5mpl	ENSMUST00000222405	retained_intron		12	-1	111966967	437
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000202841	retained_intron		5	1	150295388	2784
ENSMUSG00000094491	IG_V_gene	Igkv1-133	ENSMUST00000103304	IG_V_gene	principal1	6	1	67724902	374
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000239118	protein_coding	alternative2	5	1	150295388	10618
ENSMUSG00000030703	protein_coding	Gdpd3	ENSMUST00000206858	retained_intron		7	1	126766845	584
ENSMUSG00000051007	protein_coding	Gatd1	ENSMUST00000127556	retained_intron		7	-1	141414078	2164
ENSMUSG00000051007	protein_coding	Gatd1	ENSMUST00000209276	retained_intron		7	-1	141409918	1466
ENSMUSG00000030703	protein_coding	Gdpd3	ENSMUST00000205468	retained_intron		7	1	126766847	811
ENSMUSG00000036381	protein_coding	P2ry14	ENSMUST00000196716	retained_intron		3	-1	59153618	7795
ENSMUSG00000030703	protein_coding	Gdpd3	ENSMUST00000206350	retained_intron		7	1	126767175	574
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000200964	retained_intron		5	1	150399653	937
ENSMUSG00000051007	protein_coding	Gatd1	ENSMUST00000128006	retained_intron		7	-1	141414065	389
ENSMUSG00000046082	protein_coding	Tmem174	ENSMUST00000050389	protein_coding	principal1	13	-1	98637410	2252
ENSMUSG00000030703	protein_coding	Gdpd3	ENSMUST00000207004	retained_intron		7	1	126768150	625
ENSMUSG00000069274	protein_coding	H4c6	ENSMUST00000102971	protein_coding	principal1	13	-1	23551648	391
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000202630	retained_intron		5	1	150409709	3980
ENSMUSG00000050730	protein_coding	Arhgap42	ENSMUST00000182617	retained_intron		9	-1	9239101	1868
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000201634	retained_intron		5	1	150429802	398
ENSMUSG00000094789	protein_coding	Gm28490	ENSMUST00000190946	protein_coding	principal1	Y	-1	31634756	930
ENSMUSG00000051007	protein_coding	Gatd1	ENSMUST00000142852	retained_intron		7	-1	141414076	399
ENSMUSG00000114545	lincRNA	Gm32184	ENSMUST00000225451	lincRNA		13	-1	41559913	846
ENSMUSG00000030703	protein_coding	Gdpd3	ENSMUST00000205910	retained_intron		7	1	126768520	606
ENSMUSG00000094789	protein_coding	Gm28490	ENSMUST00000179076	protein_coding		Y	-1	31633324	498
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000202566	protein_coding		5	1	150436930	4379
ENSMUSG00000026875	protein_coding	Traf1	ENSMUST00000113064	protein_coding	principal1	2	-1	34961772	2325
ENSMUSG00000063801	protein_coding	Ap3s2	ENSMUST00000075657	protein_coding	principal1	7	-1	79920649	5813
ENSMUSG00000055323	processed_transcript	Gm9967	ENSMUST00000205660	antisense		7	-1	126776778	361
ENSMUSG00000050730	protein_coding	Arhgap42	ENSMUST00000215397	protein_coding		9	-1	9238900	663
ENSMUSG00000097373	antisense	Gm26877	ENSMUST00000180728	antisense		13	1	41359971	633
ENSMUSG00000033450	protein_coding	Tagap	ENSMUST00000036370	protein_coding	principal1	17	1	7926000	3076
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000200863	protein_coding		5	1	150451130	3288
ENSMUSG00000064254	protein_coding	Ethe1	ENSMUST00000077191	protein_coding	principal1	7	1	24587543	1484
ENSMUSG00000114914	antisense	Gm48571	ENSMUST00000225967	antisense		13	1	41379956	140
ENSMUSG00000114105	lincRNA	Gm47713	ENSMUST00000221741	lincRNA		12	-1	25304613	649
ENSMUSG00000055323	processed_transcript	Gm9967	ENSMUST00000206903	antisense		7	-1	126776766	408
ENSMUSG00000050730	protein_coding	Arhgap42	ENSMUST00000183182	protein_coding		9	-1	9239026	1458
ENSMUSG00000033450	protein_coding	Tagap	ENSMUST00000226153	processed_transcript		17	1	7926935	14
ENSMUSG00000063801	protein_coding	Ap3s2	ENSMUST00000206725	nonsense_mediated_decay		7	-1	79920596	519
ENSMUSG00000055323	processed_transcript	Gm9967	ENSMUST00000068836	retained_intron		7	-1	126776818	1854
ENSMUSG00000041468	protein_coding	Gpr12	ENSMUST00000196096	retained_intron		5	-1	146584404	2007
ENSMUSG00000113669	lincRNA	Gm36723	ENSMUST00000220620	lincRNA		12	1	25303940	1630
ENSMUSG00000026875	protein_coding	Traf1	ENSMUST00000129131	processed_transcript		2	-1	34961582	1508
ENSMUSG00000114585	antisense	Gm32401	ENSMUST00000224440	antisense		13	1	41487130	1220
ENSMUSG00000050075	protein_coding	Gpr171	ENSMUST00000085040	protein_coding	principal1	3	-1	59101821	2225
ENSMUSG00000114585	antisense	Gm32401	ENSMUST00000225298	antisense		13	1	41487147	1630
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000169438	protein_coding		15	-1	76199406	14827
ENSMUSG00000026875	protein_coding	Traf1	ENSMUST00000201690	protein_coding		2	-1	34958136	386
ENSMUSG00000113669	lincRNA	Gm36723	ENSMUST00000221460	lincRNA		12	1	25304181	656
ENSMUSG00000114537	TEC	Gm48569	ENSMUST00000223906	TEC		13	-1	41477900	1375
ENSMUSG00000026785	protein_coding	Pkn3	ENSMUST00000045246	protein_coding	principal1	2	1	30078584	3113
ENSMUSG00000026875	protein_coding	Traf1	ENSMUST00000201335	retained_intron		2	-1	34958161	1980
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000201196	retained_intron		5	1	150457711	2204
ENSMUSG00000103668	antisense	Gm38186	ENSMUST00000192574	antisense		3	1	59344271	449
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000147598	retained_intron		10	1	119819505	2054
ENSMUSG00000026875	protein_coding	Traf1	ENSMUST00000141238	processed_transcript		2	-1	34958905	628
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000202070	retained_intron		5	1	150460646	3684
ENSMUSG00000035498	protein_coding	Cdcp1	ENSMUST00000039229	protein_coding	principal1	9	-1	123216038	5310
ENSMUSG00000026875	protein_coding	Traf1	ENSMUST00000156479	retained_intron		2	-1	34961597	3415
ENSMUSG00000026875	protein_coding	Traf1	ENSMUST00000135870	processed_transcript		2	-1	34961562	319
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000200750	retained_intron		5	1	150487177	2618
ENSMUSG00000041468	protein_coding	Gpr12	ENSMUST00000036211	protein_coding	principal1	5	-1	146585239	2219
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000202571	retained_intron		5	1	150490106	1878
ENSMUSG00000113669	lincRNA	Gm36723	ENSMUST00000222356	lincRNA		12	1	25304445	643
ENSMUSG00000026785	protein_coding	Pkn3	ENSMUST00000134591	retained_intron		2	1	30078698	2400
ENSMUSG00000114354	lincRNA	Gm34961	ENSMUST00000224737	lincRNA		13	1	59823266	727
ENSMUSG00000056078	protein_coding	Lipm	ENSMUST00000237637	retained_intron		19	1	34100933	2925
ENSMUSG00000056602	protein_coding	Fry	ENSMUST00000201628	retained_intron		5	1	150495875	1761
ENSMUSG00000026785	protein_coding	Pkn3	ENSMUST00000137240	retained_intron		2	1	30078754	3449
ENSMUSG00000113669	lincRNA	Gm36723	ENSMUST00000222226	lincRNA		12	1	25316190	2033
ENSMUSG00000114669	lincRNA	Gm48384	ENSMUST00000225895	lincRNA		13	1	59873642	273
ENSMUSG00000113669	lincRNA	Gm36723	ENSMUST00000223262	lincRNA		12	1	25318185	1511
ENSMUSG00000041468	protein_coding	Gpr12	ENSMUST00000197431	protein_coding	principal1	5	-1	146584832	1455
ENSMUSG00000026785	protein_coding	Pkn3	ENSMUST00000126838	retained_intron		2	1	30080851	623
ENSMUSG00000035498	protein_coding	Cdcp1	ENSMUST00000140915	retained_intron		9	-1	123215999	2738
ENSMUSG00000106719	antisense	Gm42556	ENSMUST00000201397	antisense		5	-1	150299441	607
ENSMUSG00000026785	protein_coding	Pkn3	ENSMUST00000156197	retained_intron		2	1	30084653	610
ENSMUSG00000041468	protein_coding	Gpr12	ENSMUST00000200112	protein_coding		5	-1	146584819	326
ENSMUSG00000113669	lincRNA	Gm36723	ENSMUST00000222212	lincRNA		12	1	25381971	664
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000138410	protein_coding	principal3	10	1	119819512	3532
ENSMUSG00000113669	lincRNA	Gm36723	ENSMUST00000221270	lincRNA		12	1	25394755	1243
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000169714	protein_coding	alternative2	15	-1	76199835	15001
ENSMUSG00000041468	protein_coding	Gpr12	ENSMUST00000197825	protein_coding		5	-1	146584843	580
ENSMUSG00000114490	lincRNA	Gm19866	ENSMUST00000223864	lincRNA		13	-1	59907119	511
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000144825	protein_coding	alternative2	10	1	119819512	3250
ENSMUSG00000114490	lincRNA	Gm19866	ENSMUST00000224295	lincRNA		13	-1	59915788	457
ENSMUSG00000105188	processed_pseudogene	Gm8190	ENSMUST00000199603	processed_pseudogene		5	-1	108154830	586
ENSMUSG00000105591	processed_pseudogene	Gm43083	ENSMUST00000199594	processed_pseudogene		5	-1	108211434	476
ENSMUSG00000015335	protein_coding	Zdhhc12	ENSMUST00000148717	processed_transcript		2	-1	30093019	1483
ENSMUSG00000105554	processed_pseudogene	Gm7118	ENSMUST00000200167	processed_pseudogene		5	-1	108146907	1003
ENSMUSG00000114490	lincRNA	Gm19866	ENSMUST00000223935	lincRNA		13	-1	59915822	346
ENSMUSG00000054871	protein_coding	Tmem158	ENSMUST00000068140	protein_coding	principal1	9	-1	123260764	1712
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000148954	protein_coding	alternative2	10	1	119819515	3293
ENSMUSG00000095696	protein_coding	Olfr786	ENSMUST00000204529	protein_coding	principal1	10	1	129427306	2824
ENSMUSG00000052565	protein_coding	H1f3	ENSMUST00000045301	protein_coding	principal1	13	1	23553262	7425
ENSMUSG00000117833	processed_pseudogene	Gm50135	ENSMUST00000236015	processed_pseudogene		19	1	56012529	397
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000144959	protein_coding	alternative2	10	1	119819525	3462
ENSMUSG00000095696	protein_coding	Olfr786	ENSMUST00000076508	protein_coding	principal1	10	1	129436814	939
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000169108	protein_coding	alternative2	15	-1	76200607	14853
ENSMUSG00000026668	protein_coding	Ucma	ENSMUST00000115010	protein_coding	principal1	2	1	4976151	847
ENSMUSG00000117827	lincRNA	D730002M21Rik	ENSMUST00000236136	lincRNA		19	1	56035096	2691
ENSMUSG00000069273	protein_coding	H3c6	ENSMUST00000105107	protein_coding	principal1	13	-1	23562369	836
ENSMUSG00000070419	protein_coding	Cyp3a57	ENSMUST00000174696	nonsense_mediated_decay		5	1	145345279	1491
ENSMUSG00000114308	processed_pseudogene	Gm48390	ENSMUST00000225115	processed_pseudogene		13	1	59919438	903
ENSMUSG00000111371	lincRNA	Gm47162	ENSMUST00000213385	lincRNA		9	1	123307084	447
ENSMUSG00000058492	transcribed_unprocessed_pseudogene	Scp2-ps2	ENSMUST00000216438	processed_transcript		9	-1	123307969	1370
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000076442	protein_coding	principal4	15	-1	76206322	15439
ENSMUSG00000058492	transcribed_unprocessed_pseudogene	Scp2-ps2	ENSMUST00000213851	processed_transcript		9	-1	123317998	609
ENSMUSG00000058492	transcribed_unprocessed_pseudogene	Scp2-ps2	ENSMUST00000072166	transcribed_unprocessed_pseudogene		9	-1	123307989	478
ENSMUSG00000117695	lincRNA	Gm31912	ENSMUST00000235362	lincRNA		19	1	56106248	1615
ENSMUSG00000040383	protein_coding	Aqr	ENSMUST00000043160	protein_coding	principal3	2	-1	114175339	4888
ENSMUSG00000069272	protein_coding	H2ac8	ENSMUST00000102969	protein_coding	principal1	13	-1	23571220	704
ENSMUSG00000026668	protein_coding	Ucma	ENSMUST00000027978	protein_coding		2	1	4976181	756
ENSMUSG00000117695	lincRNA	Gm31912	ENSMUST00000238174	lincRNA		19	1	56106310	3853
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000171562	protein_coding		15	-1	76208653	14944
ENSMUSG00000022829	protein_coding	Stxbp5l	ENSMUST00000114787	protein_coding	principal3	16	-1	37384923	4394
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000139352	retained_intron		10	1	119850739	5451
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000127787	processed_transcript		10	1	119909947	2979
ENSMUSG00000114795	lincRNA	Gm48396	ENSMUST00000223983	lincRNA		13	-1	60057625	306
ENSMUSG00000114734	lincRNA	Gm48397	ENSMUST00000224326	lincRNA		13	1	60068641	2931
ENSMUSG00000026668	protein_coding	Ucma	ENSMUST00000195688	protein_coding		2	1	4976184	554
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000130387	protein_coding		10	1	119992720	2780
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000165210	protein_coding		15	-1	76188043	4937
ENSMUSG00000056078	protein_coding	Lipm	ENSMUST00000025685	protein_coding	principal1	19	1	34100933	2711
ENSMUSG00000040383	protein_coding	Aqr	ENSMUST00000102543	protein_coding	alternative2	2	-1	114175277	4352
ENSMUSG00000022155	protein_coding	Mroh2b	ENSMUST00000228458	retained_intron		15	1	4929853	2834
ENSMUSG00000022829	protein_coding	Stxbp5l	ENSMUST00000114782	protein_coding	alternative2	16	-1	37384923	3996
ENSMUSG00000114531	lincRNA	A530065N20Rik	ENSMUST00000225266	lincRNA		13	1	60029711	3732
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000105261	protein_coding		10	1	119992922	3608
ENSMUSG00000022155	protein_coding	Mroh2b	ENSMUST00000226849	retained_intron		15	1	4948482	921
ENSMUSG00000026668	protein_coding	Ucma	ENSMUST00000167607	protein_coding		2	1	4976122	785
ENSMUSG00000114531	lincRNA	A530065N20Rik	ENSMUST00000225586	lincRNA		13	1	60109115	2116
ENSMUSG00000056078	protein_coding	Lipm	ENSMUST00000235239	processed_transcript		19	1	34100940	620
ENSMUSG00000022346	protein_coding	Myc	ENSMUST00000161976	protein_coding		15	1	61985391	2338
ENSMUSG00000040383	protein_coding	Aqr	ENSMUST00000140441	processed_transcript		2	-1	114119187	3175
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000154238	protein_coding		10	1	119993070	2482
ENSMUSG00000083533	processed_pseudogene	Gm13450	ENSMUST00000121107	processed_pseudogene		2	-1	34964904	167
ENSMUSG00000070419	protein_coding	Cyp3a57	ENSMUST00000079268	protein_coding	principal1	5	1	145345287	1986
ENSMUSG00000028976	protein_coding	Slc2a5	ENSMUST00000030826	protein_coding	principal1	4	1	150119283	3158
ENSMUSG00000032374	protein_coding	Plod2	ENSMUST00000070522	protein_coding	principal3	9	1	92542223	3649
ENSMUSG00000100421	lincRNA	Gm29044	ENSMUST00000188980	lincRNA		Y	-1	8257801	300
ENSMUSG00000100421	lincRNA	Gm29044	ENSMUST00000188916	lincRNA		Y	-1	8257796	283
ENSMUSG00000040383	protein_coding	Aqr	ENSMUST00000126701	processed_transcript		2	-1	114141143	772
ENSMUSG00000034813	protein_coding	Grip1	ENSMUST00000081260	nonsense_mediated_decay		10	1	119993106	2361
ENSMUSG00000103618	TEC	Gm37951	ENSMUST00000192963	TEC		Y	-1	8254057	3032
ENSMUSG00000056531	protein_coding	Ccdc18	ENSMUST00000197718	nonsense_mediated_decay		5	1	108132875	1379
ENSMUSG00000022346	protein_coding	Myc	ENSMUST00000022971	protein_coding	principal1	15	1	61985391	2338
ENSMUSG00000112741	TEC	Gm47341	ENSMUST00000219716	TEC		10	1	119462350	2172
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000171634	protein_coding		15	-1	76206321	3075
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000165453	protein_coding		15	-1	76199835	2158
ENSMUSG00000028976	protein_coding	Slc2a5	ENSMUST00000136610	processed_transcript		4	1	150128946	799
ENSMUSG00000084764	antisense	Grip1os2	ENSMUST00000153898	antisense		10	-1	119761699	722
ENSMUSG00000112287	TEC	Gm47024	ENSMUST00000219397	TEC		10	1	119471318	2571
ENSMUSG00000101928	protein_coding	Gm20824	ENSMUST00000186739	protein_coding	principal1	Y	1	8257907	919
ENSMUSG00000022346	protein_coding	Myc	ENSMUST00000159327	protein_coding		15	1	61985564	2186
ENSMUSG00000040592	protein_coding	Cd79b	ENSMUST00000044228	protein_coding	alternative2	11	-1	106314762	1431
ENSMUSG00000020834	protein_coding	Dhrs13	ENSMUST00000021187	protein_coding	principal1	11	1	78032280	1779
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000069805	protein_coding	alternative1	3	-1	89960629	5559
ENSMUSG00000040592	protein_coding	Cd79b	ENSMUST00000167143	protein_coding	principal2	11	-1	106314529	1195
ENSMUSG00000028976	protein_coding	Slc2a5	ENSMUST00000132426	retained_intron		4	1	150139352	672
ENSMUSG00000032374	protein_coding	Plod2	ENSMUST00000160359	protein_coding	alternative2	9	1	92542264	3663
ENSMUSG00000020834	protein_coding	Dhrs13	ENSMUST00000144028	nonsense_mediated_decay		11	1	78032349	1516
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000169289	protein_coding		15	-1	76208253	2099
ENSMUSG00000024774	protein_coding	Ankrd22	ENSMUST00000025686	protein_coding	principal1	19	-1	34166053	2846
ENSMUSG00000028976	protein_coding	Slc2a5	ENSMUST00000151504	processed_transcript		4	1	150139553	594
ENSMUSG00000022346	protein_coding	Myc	ENSMUST00000167731	protein_coding		15	1	61985622	1821
ENSMUSG00000020834	protein_coding	Dhrs13	ENSMUST00000122342	protein_coding		11	1	78032352	1791
ENSMUSG00000086913	antisense	Gm14019	ENSMUST00000131514	antisense		2	-1	121866717	403
ENSMUSG00000032374	protein_coding	Plod2	ENSMUST00000160142	retained_intron		9	1	92573588	844
ENSMUSG00000020834	protein_coding	Dhrs13	ENSMUST00000092881	protein_coding		11	1	78032359	361
ENSMUSG00000022346	protein_coding	Myc	ENSMUST00000159338	protein_coding		15	1	61987034	381
ENSMUSG00000024774	protein_coding	Ankrd22	ENSMUST00000160474	processed_transcript		19	-1	34154917	1002
ENSMUSG00000087050	antisense	Dhrs13os	ENSMUST00000150471	antisense		11	-1	78032665	2429
ENSMUSG00000024774	protein_coding	Ankrd22	ENSMUST00000159887	processed_transcript		19	-1	34160860	1002
ENSMUSG00000115691	lincRNA	Gm48914	ENSMUST00000226980	lincRNA		14	-1	32317985	1833
ENSMUSG00000032374	protein_coding	Plod2	ENSMUST00000161906	retained_intron		9	1	92595345	596
ENSMUSG00000032374	protein_coding	Plod2	ENSMUST00000190075	retained_intron		9	1	92601342	1276
ENSMUSG00000015335	protein_coding	Zdhhc12	ENSMUST00000102865	protein_coding	principal1	2	-1	30093648	1165
ENSMUSG00000030963	protein_coding	Umod	ENSMUST00000209095	protein_coding	principal1	7	-1	119479255	2571
ENSMUSG00000022829	protein_coding	Stxbp5l	ENSMUST00000114781	protein_coding	alternative2	16	-1	37384958	3544
ENSMUSG00000115813	lincRNA	Gm46447	ENSMUST00000227042	lincRNA		14	1	32301924	1870
ENSMUSG00000104843	processed_pseudogene	Gm5308	ENSMUST00000196752	processed_pseudogene		6	-1	67735604	1354
ENSMUSG00000089646	processed_pseudogene	Gm15796	ENSMUST00000162135	processed_pseudogene		5	1	38507463	204
ENSMUSG00000115813	lincRNA	Gm46447	ENSMUST00000226403	lincRNA		14	1	32305102	744
ENSMUSG00000022346	protein_coding	Myc	ENSMUST00000160009	protein_coding		15	1	61987422	1765
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000167754	protein_coding		15	-1	76232045	2219
ENSMUSG00000104584	processed_pseudogene	Rpl18a-ps3	ENSMUST00000198938	processed_pseudogene		6	-1	67748730	171
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000166428	protein_coding		15	-1	76232570	2078
ENSMUSG00000074502	protein_coding	Ubtfl1	ENSMUST00000164441	protein_coding	principal1	9	1	18404418	2639
ENSMUSG00000022829	protein_coding	Stxbp5l	ENSMUST00000114780	protein_coding	alternative2	16	-1	37384962	3476
ENSMUSG00000022346	protein_coding	Myc	ENSMUST00000191178	protein_coding		15	1	61985922	1362
ENSMUSG00000106401	IG_V_pseudogene	Gm43284	ENSMUST00000200103	IG_V_pseudogene		6	1	67754746	253
ENSMUSG00000015335	protein_coding	Zdhhc12	ENSMUST00000081838	protein_coding		2	-1	30093635	1187
ENSMUSG00000001076	protein_coding	C1ql4	ENSMUST00000064462	protein_coding	principal1	15	-1	99087817	1474
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000170728	protein_coding		15	-1	76200607	254
ENSMUSG00000074502	protein_coding	Ubtfl1	ENSMUST00000169398	protein_coding	principal1	9	1	18404420	4430
ENSMUSG00000040383	protein_coding	Aqr	ENSMUST00000125460	processed_transcript		2	-1	114175246	3344
ENSMUSG00000074384	protein_coding	AI429214	ENSMUST00000098825	protein_coding	principal1	8	1	36993604	1930
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000163354	retained_intron		3	-1	89953365	4894
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000170915	protein_coding		15	-1	76209165	316
ENSMUSG00000015335	protein_coding	Zdhhc12	ENSMUST00000137001	retained_intron		2	-1	30093616	846
ENSMUSG00000074502	protein_coding	Ubtfl1	ENSMUST00000098973	protein_coding	principal1	9	1	18409094	1649
ENSMUSG00000040383	protein_coding	Aqr	ENSMUST00000131785	processed_transcript		2	-1	114175338	3112
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000165135	retained_intron		15	-1	76232574	691
ENSMUSG00000040383	protein_coding	Aqr	ENSMUST00000129504	processed_transcript		2	-1	114175338	914
ENSMUSG00000038009	protein_coding	Dnajc22	ENSMUST00000146173	processed_transcript		15	1	99093170	381
ENSMUSG00000096497	protein_coding	Olfr787	ENSMUST00000213329	protein_coding	principal1	10	1	129461862	4958
ENSMUSG00000040383	protein_coding	Aqr	ENSMUST00000147191	processed_transcript		2	-1	114181048	504
ENSMUSG00000036646	protein_coding	Man1b1	ENSMUST00000042390	protein_coding	principal1	2	1	25332729	3755
ENSMUSG00000040383	protein_coding	Aqr	ENSMUST00000154317	processed_transcript		2	-1	114187024	504
ENSMUSG00000096497	protein_coding	Olfr787	ENSMUST00000077836	protein_coding	principal1	10	1	129462678	939
ENSMUSG00000024430	protein_coding	Cabyr	ENSMUST00000234735	protein_coding	alternative2	18	1	12740322	1590
ENSMUSG00000110242	antisense	G630064G18Rik	ENSMUST00000209814	antisense		8	-1	37024238	1795
ENSMUSG00000030963	protein_coding	Umod	ENSMUST00000033263	protein_coding	principal1	7	-1	119479255	2625
ENSMUSG00000024430	protein_coding	Cabyr	ENSMUST00000235000	protein_coding	alternative2	18	1	12741311	746
ENSMUSG00000116717	lincRNA	Gm49574	ENSMUST00000231686	lincRNA		16	1	58238104	1544
ENSMUSG00000099943	processed_pseudogene	Gm18181	ENSMUST00000190670	processed_pseudogene		1	-1	113583506	736
ENSMUSG00000074501	processed_pseudogene	Gm5612	ENSMUST00000053326	processed_pseudogene		9	1	18427543	375
ENSMUSG00000096580	IG_V_gene	Igkv1-132	ENSMUST00000103305	IG_V_gene	principal1	6	1	67759700	362
ENSMUSG00000021365	protein_coding	Nedd9	ENSMUST00000021794	protein_coding	alternative1	13	-1	41487293	4871
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000166347	retained_intron		3	-1	89963279	4814
ENSMUSG00000003382	protein_coding	Etv3	ENSMUST00000119109	protein_coding	principal2	3	1	87525407	5309
ENSMUSG00000020228	protein_coding	Helb	ENSMUST00000020449	protein_coding	principal1	10	-1	120112987	4554
ENSMUSG00000030963	protein_coding	Umod	ENSMUST00000207378	nonsense_mediated_decay		7	-1	119478213	525
ENSMUSG00000104456	TEC	Gm37825	ENSMUST00000193141	TEC		16	-1	58319071	904
ENSMUSG00000110158	processed_pseudogene	Gm45690	ENSMUST00000210775	processed_pseudogene		8	1	37027093	246
ENSMUSG00000030963	protein_coding	Umod	ENSMUST00000207729	processed_transcript		7	-1	119478313	584
ENSMUSG00000036646	protein_coding	Man1b1	ENSMUST00000149464	processed_transcript		2	1	25332762	2030
ENSMUSG00000097648	lincRNA	9330185C12Rik	ENSMUST00000180837	lincRNA		1	-1	113964134	1009
ENSMUSG00000030963	protein_coding	Umod	ENSMUST00000207460	protein_coding		7	-1	119479107	759
ENSMUSG00000109817	TEC	Gm10683	ENSMUST00000211556	TEC		8	-1	37090309	1374
ENSMUSG00000049217	protein_coding	Olfr788	ENSMUST00000213222	protein_coding	principal1	10	1	129470998	4747
ENSMUSG00000003382	protein_coding	Etv3	ENSMUST00000136680	retained_intron		3	1	87525607	7263
ENSMUSG00000038009	protein_coding	Dnajc22	ENSMUST00000061295	protein_coding	principal1	15	1	99099412	1564
ENSMUSG00000036646	protein_coding	Man1b1	ENSMUST00000136245	protein_coding		2	1	25332338	792
ENSMUSG00000101687	processed_pseudogene	Gm4854	ENSMUST00000185902	processed_pseudogene		1	-1	115219763	574
ENSMUSG00000030963	protein_coding	Umod	ENSMUST00000207261	protein_coding		7	-1	119479282	419
ENSMUSG00000036168	protein_coding	Ccdc38	ENSMUST00000092215	protein_coding	principal2	10	1	93540632	3656
ENSMUSG00000049217	protein_coding	Olfr788	ENSMUST00000056961	protein_coding	principal1	10	1	129472694	936
ENSMUSG00000076505	IG_V_gene	Igkv1-131	ENSMUST00000103306	IG_V_gene	principal1	6	-1	67766772	362
ENSMUSG00000036646	protein_coding	Man1b1	ENSMUST00000131826	processed_transcript		2	1	25338113	746
ENSMUSG00000028217	protein_coding	Cdh17	ENSMUST00000029871	protein_coding	principal1	4	1	11758147	3462
ENSMUSG00000014470	protein_coding	Rnf166	ENSMUST00000014614	protein_coding	principal1	8	-1	122476064	1783
ENSMUSG00000111914	processed_pseudogene	Gm8796	ENSMUST00000219122	processed_pseudogene		10	1	106065857	936
ENSMUSG00000036646	protein_coding	Man1b1	ENSMUST00000126210	processed_transcript		2	1	25344997	415
ENSMUSG00000020228	protein_coding	Helb	ENSMUST00000148241	retained_intron		10	-1	120092209	1335
ENSMUSG00000109668	processed_pseudogene	Gm8342	ENSMUST00000209839	processed_pseudogene		8	1	37094703	757
ENSMUSG00000036646	protein_coding	Man1b1	ENSMUST00000152245	processed_transcript		2	1	25332773	370
ENSMUSG00000101357	processed_pseudogene	Gm2495	ENSMUST00000191160	processed_pseudogene		9	-1	92612977	466
ENSMUSG00000112034	TEC	Gm48363	ENSMUST00000219276	TEC		10	1	106074227	4850
ENSMUSG00000056531	protein_coding	Ccdc18	ENSMUST00000047677	protein_coding	principal1	5	1	108132914	5336
ENSMUSG00000020228	protein_coding	Helb	ENSMUST00000154501	nonsense_mediated_decay		10	-1	120112865	3095
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000168276	protein_coding	principal2	3	-1	89963508	4265
ENSMUSG00000028217	protein_coding	Cdh17	ENSMUST00000108303	protein_coding		4	1	11758193	3287
ENSMUSG00000021365	protein_coding	Nedd9	ENSMUST00000163623	protein_coding	principal3	13	-1	41359247	4626
ENSMUSG00000101822	processed_pseudogene	Gm29396	ENSMUST00000185659	processed_pseudogene		9	1	92691943	716
ENSMUSG00000036168	protein_coding	Ccdc38	ENSMUST00000139354	retained_intron		10	1	93550032	349
ENSMUSG00000014470	protein_coding	Rnf166	ENSMUST00000136356	retained_intron		8	-1	122468227	639
ENSMUSG00000112555	antisense	Gm47027	ENSMUST00000218599	antisense		10	-1	119617720	976
ENSMUSG00000003382	protein_coding	Etv3	ENSMUST00000117293	protein_coding	alternative2	3	1	87525614	2151
ENSMUSG00000036168	protein_coding	Ccdc38	ENSMUST00000140460	retained_intron		10	1	93554881	246
ENSMUSG00000110337	unprocessed_pseudogene	Gm3433	ENSMUST00000210149	unprocessed_pseudogene		8	1	37103866	1058
ENSMUSG00000047508	protein_coding	Mbd3l2	ENSMUST00000213777	protein_coding	principal1	9	1	18430654	2116
ENSMUSG00000101734	lincRNA	4933400C23Rik	ENSMUST00000189773	lincRNA		9	1	92717456	630
ENSMUSG00000085592	antisense	Gm16321	ENSMUST00000155184	antisense		10	-1	119443624	574
ENSMUSG00000109646	processed_pseudogene	Gm45523	ENSMUST00000210712	processed_pseudogene		8	-1	37184232	799
ENSMUSG00000056531	protein_coding	Ccdc18	ENSMUST00000200463	retained_intron		5	1	108132946	1371
ENSMUSG00000021365	protein_coding	Nedd9	ENSMUST00000224803	protein_coding		13	-1	41359739	711
ENSMUSG00000112668	processed_pseudogene	Gm48376	ENSMUST00000217719	processed_pseudogene		10	-1	106169259	294
ENSMUSG00000094444	lincRNA	Gm21562	ENSMUST00000190314	lincRNA		Y	-1	31736490	174
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000166502	protein_coding		3	-1	89943757	518
ENSMUSG00000036168	protein_coding	Ccdc38	ENSMUST00000132214	protein_coding	alternative2	10	1	93554884	2222
ENSMUSG00000094444	lincRNA	Gm21562	ENSMUST00000177888	lincRNA		Y	-1	31736484	498
ENSMUSG00000110285	lincRNA	Gm45524	ENSMUST00000211374	lincRNA		8	1	37097018	1250
ENSMUSG00000056531	protein_coding	Ccdc18	ENSMUST00000195973	processed_transcript		5	1	108161679	494
ENSMUSG00000014470	protein_coding	Rnf166	ENSMUST00000148780	processed_transcript		8	-1	122475688	490
ENSMUSG00000021365	protein_coding	Nedd9	ENSMUST00000225053	retained_intron		13	-1	41487242	1455
ENSMUSG00000022829	protein_coding	Stxbp5l	ENSMUST00000023526	retained_intron		16	-1	37384923	3344
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000163152	retained_intron		3	-1	89945763	736
ENSMUSG00000101734	lincRNA	4933400C23Rik	ENSMUST00000188610	lincRNA		9	1	92718716	1708
ENSMUSG00000047508	protein_coding	Mbd3l2	ENSMUST00000051008	protein_coding	principal1	9	1	18443456	2075
ENSMUSG00000003382	protein_coding	Etv3	ENSMUST00000152010	retained_intron		3	1	87525618	3819
ENSMUSG00000021365	protein_coding	Nedd9	ENSMUST00000224083	processed_transcript		13	-1	41487362	267
ENSMUSG00000109932	processed_pseudogene	Gm7319	ENSMUST00000210047	processed_pseudogene		8	1	37154715	778
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000171941	protein_coding		3	-1	89946472	507
ENSMUSG00000104744	processed_pseudogene	Gm18980	ENSMUST00000199098	processed_pseudogene		6	-1	67779328	1079
ENSMUSG00000021365	protein_coding	Nedd9	ENSMUST00000225297	processed_transcript		13	-1	41487360	302
ENSMUSG00000090174	antisense	Gm10612	ENSMUST00000162198	antisense		8	1	122697860	1681
ENSMUSG00000085418	antisense	Grip1os1	ENSMUST00000126965	antisense		10	-1	119852390	1084
ENSMUSG00000114552	antisense	Gm48570	ENSMUST00000224720	antisense		13	1	41402291	393
ENSMUSG00000022829	protein_coding	Stxbp5l	ENSMUST00000149984	processed_transcript		16	-1	37204576	680
ENSMUSG00000099823	lincRNA	Gm28054	ENSMUST00000187280	lincRNA		9	1	92895832	872
ENSMUSG00000097699	bidirectional_promoter_lncRNA	5430400D12Rik	ENSMUST00000181717	bidirectional_promoter_lncRNA		7	1	79920723	1690
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000167442	retained_intron		3	-1	89946555	403
ENSMUSG00000036168	protein_coding	Ccdc38	ENSMUST00000128786	processed_transcript		10	1	93564831	359
ENSMUSG00000102665	TEC	Gm38379	ENSMUST00000194351	TEC		8	1	120109441	1525
ENSMUSG00000111273	protein_coding	Olfr789	ENSMUST00000213236	protein_coding	principal1	10	1	129484752	4235
ENSMUSG00000022829	protein_coding	Stxbp5l	ENSMUST00000114775	protein_coding		16	-1	37384923	1691
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000170324	retained_intron		3	-1	89947351	831
ENSMUSG00000101309	processed_pseudogene	Gm29397	ENSMUST00000185205	processed_pseudogene		9	1	92976226	333
ENSMUSG00000108350	TEC	Gm44950	ENSMUST00000206403	TEC		7	-1	79924867	2296
ENSMUSG00000003382	protein_coding	Etv3	ENSMUST00000170036	protein_coding	principal2	3	1	87525578	5127
ENSMUSG00000022829	protein_coding	Stxbp5l	ENSMUST00000151910	retained_intron		16	-1	37384923	2190
ENSMUSG00000111273	protein_coding	Olfr789	ENSMUST00000213992	protein_coding	principal1	10	1	129484760	4421
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000170739	nonsense_mediated_decay		3	-1	89948402	447
ENSMUSG00000085418	antisense	Grip1os1	ENSMUST00000135940	antisense		10	-1	119852277	1192
ENSMUSG00000022829	protein_coding	Stxbp5l	ENSMUST00000149790	processed_transcript		16	-1	37384958	1625
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000167257	retained_intron		3	-1	89948532	756
ENSMUSG00000075585	antisense	6330403L08Rik	ENSMUST00000187923	antisense		5	1	138995056	5522
ENSMUSG00000031789	protein_coding	Cngb1	ENSMUST00000119870	protein_coding	principal2	8	-1	95306585	6189
ENSMUSG00000103541	TEC	Gm37667	ENSMUST00000193103	TEC		4	-1	124279177	752
ENSMUSG00000022829	protein_coding	Stxbp5l	ENSMUST00000123629	retained_intron		16	-1	37384923	971
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000171818	retained_intron		3	-1	89950453	697
ENSMUSG00000075585	antisense	6330403L08Rik	ENSMUST00000100518	antisense		5	1	138995056	5521
ENSMUSG00000105907	lincRNA	Gm34333	ENSMUST00000200363	lincRNA		5	-1	146600102	669
ENSMUSG00000085454	antisense	Grip1os3	ENSMUST00000154566	antisense		10	-1	119454830	485
ENSMUSG00000078503	protein_coding	Zfp990	ENSMUST00000105742	protein_coding	principal1	4	1	145510759	2996
ENSMUSG00000035285	protein_coding	Nat14	ENSMUST00000207506	protein_coding		7	1	4922028	541
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000166705	retained_intron		3	-1	89954639	652
ENSMUSG00000024430	protein_coding	Cabyr	ENSMUST00000115857	protein_coding	principal3	18	1	12741324	1557
ENSMUSG00000105651	lincRNA	1700017M07Rik	ENSMUST00000198307	lincRNA		3	-1	35276131	940
ENSMUSG00000085454	antisense	Grip1os3	ENSMUST00000127706	antisense		10	-1	119454780	790
ENSMUSG00000078503	protein_coding	Zfp990	ENSMUST00000128939	processed_transcript		4	1	145510777	262
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000170696	protein_coding		3	-1	89959554	785
ENSMUSG00000106020	lincRNA	4930573C15Rik	ENSMUST00000197707	lincRNA		5	1	146706622	777
ENSMUSG00000106512	TEC	Gm43078	ENSMUST00000197222	TEC		3	1	35413833	168
ENSMUSG00000106496	processed_pseudogene	Gm7733	ENSMUST00000199038	processed_pseudogene		3	-1	35537800	919
ENSMUSG00000100294	lincRNA	1700034K08Rik	ENSMUST00000185830	lincRNA		9	-1	92990733	536
ENSMUSG00000105040	processed_pseudogene	Ube2l3-ps1	ENSMUST00000199777	processed_pseudogene		3	1	35545894	436
ENSMUSG00000086087	lincRNA	Gm12916	ENSMUST00000139012	lincRNA		4	-1	124299848	948
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000168880	protein_coding		3	-1	89963114	459
ENSMUSG00000085454	antisense	Grip1os3	ENSMUST00000146294	antisense		10	-1	119455379	957
ENSMUSG00000100294	lincRNA	1700034K08Rik	ENSMUST00000188082	lincRNA		9	-1	93005733	619
ENSMUSG00000031789	protein_coding	Cngb1	ENSMUST00000120044	protein_coding	alternative2	8	-1	95281590	3243
ENSMUSG00000112106	TEC	Gm47026	ENSMUST00000218068	TEC		10	1	119654064	2332
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000089610	protein_coding	alternative2	15	-1	76231378	14972
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000171422	protein_coding		3	-1	89961815	360
ENSMUSG00000035285	protein_coding	Nat14	ENSMUST00000047309	protein_coding	principal1	7	1	4922251	1612
ENSMUSG00000078503	protein_coding	Zfp990	ENSMUST00000136309	protein_coding		4	1	145510791	597
ENSMUSG00000031789	protein_coding	Cngb1	ENSMUST00000121162	protein_coding	alternative2	8	-1	95281610	3336
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000054449	protein_coding	alternative2	15	-1	76199835	15018
ENSMUSG00000060671	protein_coding	Atp8b2	ENSMUST00000107396	protein_coding		3	-1	89963508	5705
ENSMUSG00000100294	lincRNA	1700034K08Rik	ENSMUST00000190562	lincRNA		9	-1	93005739	577
ENSMUSG00000078503	protein_coding	Zfp990	ENSMUST00000105741	protein_coding	principal1	4	1	145514884	3044
ENSMUSG00000100294	lincRNA	1700034K08Rik	ENSMUST00000188921	lincRNA		9	-1	93005730	279
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000073418	protein_coding	alternative2	15	-1	76206321	15455
ENSMUSG00000035285	protein_coding	Nat14	ENSMUST00000207527	protein_coding		7	1	4922782	572
ENSMUSG00000021109	protein_coding	Hif1a	ENSMUST00000110461	protein_coding	alternative2	12	1	73901375	4385
ENSMUSG00000112523	TEC	Gm48377	ENSMUST00000220086	TEC		10	1	106183021	871
ENSMUSG00000118505	protein_coding	ETV3L	ENSMUST00000238894	protein_coding	principal1	3	1	87550099	1797
ENSMUSG00000098171	processed_pseudogene	Gm9621	ENSMUST00000183322	processed_pseudogene		9	-1	93392370	1003
ENSMUSG00000020018	protein_coding	Snrpf	ENSMUST00000020203	protein_coding	principal1	10	-1	93589706	861
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000071869	protein_coding	alternative2	15	-1	76209165	14917
ENSMUSG00000118505	protein_coding	ETV3L	ENSMUST00000238853	protein_coding	principal1	3	1	87551249	2111
ENSMUSG00000022565	protein_coding	Plec	ENSMUST00000080857	protein_coding		15	-1	76208253	14959
ENSMUSG00000035285	protein_coding	Nat14	ENSMUST00000207687	protein_coding	principal1	7	1	4922868	1415
ENSMUSG00000111630	processed_pseudogene	Gm47165	ENSMUST00000216733	processed_pseudogene		9	1	93569574	470
ENSMUSG00000023224	protein_coding	Serping1	ENSMUST00000023994	protein_coding	principal1	2	-1	84775404	1768
ENSMUSG00000025231	protein_coding	Sufu	ENSMUST00000039922	protein_coding	principal3	19	1	46396896	4522
ENSMUSG00000056877	processed_pseudogene	Rps15a-ps1	ENSMUST00000071120	processed_pseudogene		10	-1	106192770	393
ENSMUSG00000111352	processed_pseudogene	Gm5369	ENSMUST00000217499	processed_pseudogene		9	1	94139462	588
ENSMUSG00000035285	protein_coding	Nat14	ENSMUST00000208754	protein_coding		7	1	4922977	476
ENSMUSG00000101949	processed_pseudogene	Gm5370	ENSMUST00000187187	processed_pseudogene		9	-1	94408126	574
ENSMUSG00000097407	lincRNA	4933408J17Rik	ENSMUST00000181835	lincRNA		10	1	93589413	1859
ENSMUSG00000078686	protein_coding	Mup9	ENSMUST00000122381	protein_coding	principal2	4	-1	60421934	864
ENSMUSG00000072605	protein_coding	Gm10376	ENSMUST00000169756	protein_coding	principal5	14	-1	43015628	900
ENSMUSG00000063268	protein_coding	Parp10	ENSMUST00000170226	nonsense_mediated_decay		15	-1	76233723	1047
ENSMUSG00000117425	processed_pseudogene	Gm7464	ENSMUST00000234402	processed_pseudogene		18	1	6557130	667
ENSMUSG00000056476	protein_coding	Med12l	ENSMUST00000040846	protein_coding		3	1	59005825	3747
ENSMUSG00000072605	protein_coding	Gm10376	ENSMUST00000100694	protein_coding	alternative2	14	-1	43014764	555
ENSMUSG00000099359	processed_pseudogene	Gm28934	ENSMUST00000186491	processed_pseudogene		9	1	94416558	346
ENSMUSG00000090396	unprocessed_pseudogene	Gm6536	ENSMUST00000171180	unprocessed_pseudogene		14	1	43042970	615
ENSMUSG00000031789	protein_coding	Cngb1	ENSMUST00000133716	nonsense_mediated_decay		8	-1	95306538	2420
ENSMUSG00000091961	unprocessed_pseudogene	Gm3123	ENSMUST00000163480	unprocessed_pseudogene		14	-1	43062467	480
ENSMUSG00000078686	protein_coding	Mup9	ENSMUST00000118759	protein_coding	alternative2	4	-1	60421938	909
ENSMUSG00000021348	protein_coding	Prl7d1	ENSMUST00000224026	protein_coding	principal2	13	-1	27716736	3657
ENSMUSG00000031789	protein_coding	Cngb1	ENSMUST00000134207	nonsense_mediated_decay		8	-1	95306554	2131
ENSMUSG00000023224	protein_coding	Serping1	ENSMUST00000111641	protein_coding		2	-1	84775444	1665
ENSMUSG00000060240	protein_coding	Cend1	ENSMUST00000084436	protein_coding	principal1	7	-1	141429425	1672
ENSMUSG00000021348	protein_coding	Prl7d1	ENSMUST00000021776	protein_coding	alternative2	13	-1	27716736	993
ENSMUSG00000031789	protein_coding	Cngb1	ENSMUST00000093268	protein_coding		8	-1	95306585	1512
ENSMUSG00000033952	protein_coding	Aspm	ENSMUST00000200083	protein_coding		1	1	139454772	6072
ENSMUSG00000091733	protein_coding	Gm8094	ENSMUST00000165136	protein_coding	principal1	14	-1	43076643	1408
ENSMUSG00000024430	protein_coding	Cabyr	ENSMUST00000080415	nonsense_mediated_decay		18	1	12741347	2131
ENSMUSG00000101423	lincRNA	Gm28298	ENSMUST00000190443	lincRNA		Y	-1	31779902	437
ENSMUSG00000101423	lincRNA	Gm28298	ENSMUST00000185287	lincRNA		Y	-1	31779902	622
ENSMUSG00000021348	protein_coding	Prl7d1	ENSMUST00000145879	processed_transcript		13	-1	27716725	215
ENSMUSG00000023224	protein_coding	Serping1	ENSMUST00000131456	processed_transcript		2	-1	84775128	903
ENSMUSG00000055937	protein_coding	Krt28	ENSMUST00000006963	protein_coding	principal1	11	-1	99374903	1624
ENSMUSG00000030020	protein_coding	Prickle2	ENSMUST00000113447	protein_coding	alternative1	6	-1	92567366	7679
ENSMUSG00000045027	protein_coding	Prss22	ENSMUST00000041649	protein_coding	principal1	17	-1	23998100	1324
ENSMUSG00000060240	protein_coding	Cend1	ENSMUST00000124444	protein_coding	principal1	7	-1	141429491	1733
ENSMUSG00000114317	transcribed_processed_pseudogene	Gm49873	ENSMUST00000225825	processed_transcript		14	1	43089445	594
ENSMUSG00000031789	protein_coding	Cngb1	ENSMUST00000184621	retained_intron		8	-1	95293669	606
ENSMUSG00000114317	transcribed_processed_pseudogene	Gm49873	ENSMUST00000224409	transcribed_processed_pseudogene		14	1	43089553	233
ENSMUSG00000118081	antisense	Gm50138	ENSMUST00000235226	antisense		17	-1	31461835	1107
ENSMUSG00000114317	transcribed_processed_pseudogene	Gm49873	ENSMUST00000225570	processed_transcript		14	1	43089629	390
ENSMUSG00000025231	protein_coding	Sufu	ENSMUST00000111867	protein_coding	alternative1	19	1	46396918	1747
ENSMUSG00000118081	antisense	Gm50138	ENSMUST00000236844	antisense		17	-1	31461835	324
ENSMUSG00000078686	protein_coding	Mup9	ENSMUST00000127151	retained_intron		4	-1	60420584	369
ENSMUSG00000094973	protein_coding	Eif4a3l1	ENSMUST00000204530	protein_coding	principal1	6	1	136327539	1573
ENSMUSG00000031789	protein_coding	Cngb1	ENSMUST00000156514	nonsense_mediated_decay		8	-1	95306570	2554
ENSMUSG00000060240	protein_coding	Cend1	ENSMUST00000137488	protein_coding	principal1	7	-1	141429418	1697
ENSMUSG00000116714	antisense	2210020O09Rik	ENSMUST00000232596	antisense		16	-1	32456149	509
ENSMUSG00000078686	protein_coding	Mup9	ENSMUST00000137025	retained_intron		4	-1	60420895	787
ENSMUSG00000033952	protein_coding	Aspm	ENSMUST00000199998	retained_intron		1	1	139454773	3982
ENSMUSG00000024430	protein_coding	Cabyr	ENSMUST00000121018	protein_coding	alternative2	18	1	12741349	1305
ENSMUSG00000045414	protein_coding	Dipk2a	ENSMUST00000113028	protein_coding	principal1	9	-1	94538081	3950
ENSMUSG00000031789	protein_coding	Cngb1	ENSMUST00000184103	protein_coding		8	-1	95294074	536
ENSMUSG00000030020	protein_coding	Prickle2	ENSMUST00000032093	protein_coding	principal3	6	-1	92706155	7754
ENSMUSG00000094973	protein_coding	Eif4a3l1	ENSMUST00000204966	protein_coding		6	1	136328530	811
ENSMUSG00000094973	protein_coding	Eif4a3l1	ENSMUST00000077886	protein_coding	principal1	6	1	136328543	1236
ENSMUSG00000021109	protein_coding	Hif1a	ENSMUST00000110464	protein_coding		12	1	73907904	1759
ENSMUSG00000025231	protein_coding	Sufu	ENSMUST00000120778	protein_coding		19	1	46397004	1850
ENSMUSG00000078686	protein_coding	Mup9	ENSMUST00000107506	protein_coding	principal2	4	-1	60421933	721
ENSMUSG00000031789	protein_coding	Cngb1	ENSMUST00000212237	protein_coding		8	-1	95300666	754
ENSMUSG00000083916	processed_pseudogene	Gm15476	ENSMUST00000118247	processed_pseudogene		6	1	136383728	1191
ENSMUSG00000096446	protein_coding	Gm8104	ENSMUST00000168165	protein_coding	principal1	14	1	43100601	1761
ENSMUSG00000060240	protein_coding	Cend1	ENSMUST00000164387	protein_coding	principal1	7	-1	141429351	1206
ENSMUSG00000081552	processed_pseudogene	Gm12328	ENSMUST00000118611	processed_pseudogene		11	-1	73772120	197
ENSMUSG00000111019	processed_pseudogene	Gm39404	ENSMUST00000216350	processed_pseudogene		9	1	94592196	313
ENSMUSG00000078686	protein_coding	Mup9	ENSMUST00000132829	protein_coding		4	-1	60421944	598
ENSMUSG00000082726	processed_pseudogene	Gm11424	ENSMUST00000121929	processed_pseudogene		11	1	82971092	829
ENSMUSG00000079057	protein_coding	Cyp4v3	ENSMUST00000095328	protein_coding	principal1	8	-1	45333216	3808
ENSMUSG00000025231	protein_coding	Sufu	ENSMUST00000118440	protein_coding		19	1	46397026	2681
ENSMUSG00000030020	protein_coding	Prickle2	ENSMUST00000113446	protein_coding	alternative1	6	-1	92534861	7860
ENSMUSG00000082821	unprocessed_pseudogene	Gm12880	ENSMUST00000120652	unprocessed_pseudogene		4	-1	121479450	494
ENSMUSG00000025231	protein_coding	Sufu	ENSMUST00000235166	processed_transcript		19	1	46401124	1459
ENSMUSG00000101595	lincRNA	Gm29395	ENSMUST00000188551	lincRNA		9	-1	94668818	1049
ENSMUSG00000111256	antisense	Gm48094	ENSMUST00000213319	antisense		10	1	31398923	781
ENSMUSG00000033952	protein_coding	Aspm	ENSMUST00000053364	protein_coding	principal1	1	1	139454775	9867
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000182642	retained_intron		1	1	63445891	2889
ENSMUSG00000110960	processed_pseudogene	Supt4b	ENSMUST00000214434	processed_pseudogene		10	-1	31414165	351
ENSMUSG00000086760	lincRNA	1700025D23Rik	ENSMUST00000129365	lincRNA		11	1	114091406	846
ENSMUSG00000110758	TEC	Gm48092	ENSMUST00000214055	TEC		10	-1	31426090	2562
ENSMUSG00000025231	protein_coding	Sufu	ENSMUST00000123252	processed_transcript		19	1	46457906	334
ENSMUSG00000021109	protein_coding	Hif1a	ENSMUST00000021530	protein_coding	principal3	12	1	73907904	4724
ENSMUSG00000030020	protein_coding	Prickle2	ENSMUST00000113445	protein_coding	alternative1	6	-1	92481392	3708
ENSMUSG00000055538	protein_coding	Zcchc24	ENSMUST00000069180	protein_coding	principal1	14	-1	25769039	4556
ENSMUSG00000091656	protein_coding	Vmn2r106	ENSMUST00000167464	protein_coding	principal2	17	-1	20285553	3492
ENSMUSG00000033952	protein_coding	Aspm	ENSMUST00000197096	retained_intron		1	1	139454819	2163
ENSMUSG00000021109	protein_coding	Hif1a	ENSMUST00000149740	retained_intron		12	1	73926602	693
ENSMUSG00000055538	protein_coding	Zcchc24	ENSMUST00000184642	retained_intron		14	-1	25719792	3925
ENSMUSG00000037791	protein_coding	Phf12	ENSMUST00000108360	protein_coding		11	1	77982754	3047
ENSMUSG00000078686	protein_coding	Mup9	ENSMUST00000122177	retained_intron		4	-1	60421952	720
ENSMUSG00000025231	protein_coding	Sufu	ENSMUST00000144341	retained_intron		19	1	46483097	394
ENSMUSG00000021109	protein_coding	Hif1a	ENSMUST00000157041	processed_transcript		12	1	73937670	484
ENSMUSG00000091656	protein_coding	Vmn2r106	ENSMUST00000233061	protein_coding		17	-1	20285553	3324
ENSMUSG00000033952	protein_coding	Aspm	ENSMUST00000196272	processed_transcript		1	1	139483526	375
ENSMUSG00000098130	processed_pseudogene	Gm17797	ENSMUST00000182175	processed_pseudogene		6	1	92561777	997
ENSMUSG00000087700	antisense	Gm15283	ENSMUST00000221427	antisense		12	-1	73949814	818
ENSMUSG00000116986	processed_pseudogene	Gm17804	ENSMUST00000231760	processed_pseudogene		16	1	48104461	1159
ENSMUSG00000078686	protein_coding	Mup9	ENSMUST00000132461	processed_transcript		4	-1	60421950	338
ENSMUSG00000091656	protein_coding	Vmn2r106	ENSMUST00000233933	protein_coding	alternative2	17	-1	20285553	2976
ENSMUSG00000109643	lincRNA	Gm31545	ENSMUST00000209358	lincRNA		8	-1	82803361	1219
ENSMUSG00000087700	antisense	Gm15283	ENSMUST00000222217	antisense		12	-1	73869612	510
ENSMUSG00000099057	processed_pseudogene	Gm27185	ENSMUST00000184296	processed_pseudogene		14	-1	25809881	247
ENSMUSG00000112520	processed_pseudogene	Gm48379	ENSMUST00000220063	processed_pseudogene		10	1	106358324	331
ENSMUSG00000096864	unprocessed_pseudogene	Gm21978	ENSMUST00000179696	unprocessed_pseudogene		4	1	145560513	377
ENSMUSG00000035699	protein_coding	Slc51a	ENSMUST00000042042	protein_coding	principal1	16	-1	32487879	2618
ENSMUSG00000115473	processed_pseudogene	Gm49278	ENSMUST00000228335	processed_pseudogene		15	-1	28505191	437
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000120426	protein_coding		8	-1	91131151	1687
ENSMUSG00000116755	lincRNA	6430553K19Rik	ENSMUST00000232155	lincRNA		16	-1	48158499	2260
ENSMUSG00000100119	lincRNA	2700089I24Rik	ENSMUST00000190204	lincRNA		19	1	59493136	1827
ENSMUSG00000035699	protein_coding	Slc51a	ENSMUST00000231690	nonsense_mediated_decay		16	-1	32487703	1349
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000133650	protein_coding		17	-1	25937162	1398
ENSMUSG00000118118	processed_pseudogene	Gm18161	ENSMUST00000238140	processed_pseudogene		19	1	59540451	528
ENSMUSG00000082352	processed_pseudogene	Gm13228	ENSMUST00000118937	processed_pseudogene		4	1	145574528	634
ENSMUSG00000087700	antisense	Gm15283	ENSMUST00000125308	antisense		12	-1	73949785	1451
ENSMUSG00000035699	protein_coding	Slc51a	ENSMUST00000232418	retained_intron		16	-1	32487703	1541
ENSMUSG00000048164	processed_pseudogene	Gm7204	ENSMUST00000062591	processed_pseudogene		16	1	48218605	597
ENSMUSG00000115156	processed_pseudogene	Gm49279	ENSMUST00000226803	processed_pseudogene		15	-1	28540471	258
ENSMUSG00000118031	lincRNA	Gm19956	ENSMUST00000236333	lincRNA		19	1	59661323	902
ENSMUSG00000115795	processed_pseudogene	Gm8484	ENSMUST00000227687	processed_pseudogene		15	-1	28720086	1010
ENSMUSG00000116756	processed_pseudogene	Gm49770	ENSMUST00000232184	processed_pseudogene		16	1	48261814	443
ENSMUSG00000112066	processed_pseudogene	Gm48380	ENSMUST00000217782	processed_pseudogene		10	1	106444397	383
ENSMUSG00000093469	unprocessed_pseudogene	Vmn2r-ps127	ENSMUST00000175850	unprocessed_pseudogene		17	-1	20336408	1029
ENSMUSG00000000058	protein_coding	Cav2	ENSMUST00000000058	protein_coding	principal1	6	1	17281185	2733
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000227440	protein_coding	alternative2	14	1	48446124	2222
ENSMUSG00000020877	protein_coding	Scrn2	ENSMUST00000021249	protein_coding	principal1	11	1	97029938	1530
ENSMUSG00000083454	processed_pseudogene	Gm13226	ENSMUST00000117838	processed_pseudogene		4	-1	145577292	404
ENSMUSG00000087692	antisense	Gm11940	ENSMUST00000153599	antisense		11	1	99387340	417
ENSMUSG00000000058	protein_coding	Cav2	ENSMUST00000115459	protein_coding		6	1	17281327	974
ENSMUSG00000000058	protein_coding	Cav2	ENSMUST00000115462	protein_coding		6	1	17281359	694
ENSMUSG00000020877	protein_coding	Scrn2	ENSMUST00000126874	retained_intron		11	1	97030001	1552
ENSMUSG00000015653	protein_coding	Steap2	ENSMUST00000115426	protein_coding	principal1	5	-1	5694578	10408
ENSMUSG00000001056	protein_coding	Nhp2	ENSMUST00000127405	protein_coding	principal1	11	1	51619735	1042
ENSMUSG00000020877	protein_coding	Scrn2	ENSMUST00000153482	protein_coding		11	1	97030134	826
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000123896	protein_coding		10	1	81628540	460
ENSMUSG00000015653	protein_coding	Steap2	ENSMUST00000115427	protein_coding		5	-1	5694060	3470
ENSMUSG00000010154	protein_coding	Spire2	ENSMUST00000010298	protein_coding	principal1	8	1	123332713	2330
ENSMUSG00000020877	protein_coding	Scrn2	ENSMUST00000133054	retained_intron		11	1	97029952	605
ENSMUSG00000117580	processed_pseudogene	Gm50066	ENSMUST00000234884	processed_pseudogene		17	-1	24004612	405
ENSMUSG00000079363	protein_coding	Gbp4	ENSMUST00000196204	nonsense_mediated_decay		5	-1	105139586	4509
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000153573	protein_coding		10	1	81628579	447
ENSMUSG00000015653	protein_coding	Steap2	ENSMUST00000115425	protein_coding	principal1	5	-1	5694052	4550
ENSMUSG00000024430	protein_coding	Cabyr	ENSMUST00000150758	nonsense_mediated_decay		18	1	12741355	1642
ENSMUSG00000085171	lincRNA	D830026I12Rik	ENSMUST00000125170	lincRNA		6	1	17197751	659
ENSMUSG00000010154	protein_coding	Spire2	ENSMUST00000212404	protein_coding		8	1	123350251	2158
ENSMUSG00000001056	protein_coding	Nhp2	ENSMUST00000001083	retained_intron		11	1	51619771	825
ENSMUSG00000085171	lincRNA	D830026I12Rik	ENSMUST00000151170	lincRNA		6	1	17198107	1607
ENSMUSG00000095266	processed_pseudogene	Gm5225	ENSMUST00000178572	processed_pseudogene		17	1	24023774	508
ENSMUSG00000015653	protein_coding	Steap2	ENSMUST00000015797	protein_coding	principal1	5	-1	5694067	3657
ENSMUSG00000037791	protein_coding	Phf12	ENSMUST00000049167	protein_coding	principal1	11	1	77982802	4410
ENSMUSG00000085171	lincRNA	D830026I12Rik	ENSMUST00000124434	lincRNA		6	1	17198122	935
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000124720	protein_coding	alternative2	14	1	48446128	3035
ENSMUSG00000109764	protein_coding	Klkb1	ENSMUST00000026907	protein_coding	principal1	8	-1	45294859	5249
ENSMUSG00000047747	protein_coding	Rnf150	ENSMUST00000078525	protein_coding	principal1	8	1	82863356	9682
ENSMUSG00000024430	protein_coding	Cabyr	ENSMUST00000119108	protein_coding	alternative2	18	1	12741355	818
ENSMUSG00000015653	protein_coding	Steap2	ENSMUST00000149412	processed_transcript		5	-1	5677285	2471
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000226422	protein_coding	alternative2	14	1	48446140	6333
ENSMUSG00000024430	protein_coding	Cabyr	ENSMUST00000186263	protein_coding	principal3	18	1	12741355	2125
ENSMUSG00000037791	protein_coding	Phf12	ENSMUST00000153428	protein_coding		11	1	78023381	873
ENSMUSG00000085264	antisense	Gm15581	ENSMUST00000131334	antisense		6	-1	17385604	5640
ENSMUSG00000047747	protein_coding	Rnf150	ENSMUST00000211020	processed_transcript		8	1	82863472	5309
ENSMUSG00000015653	protein_coding	Steap2	ENSMUST00000115424	protein_coding	principal1	5	-1	5694060	3285
ENSMUSG00000023800	protein_coding	Tiam2	ENSMUST00000169838	protein_coding	principal1	17	1	3326573	5725
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000226400	protein_coding	alternative2	14	1	48446297	2281
ENSMUSG00000024430	protein_coding	Cabyr	ENSMUST00000191078	protein_coding	principal3	18	1	12741355	1642
ENSMUSG00000051079	protein_coding	Rgs13	ENSMUST00000052375	protein_coding	principal1	1	-1	144177372	1510
ENSMUSG00000037791	protein_coding	Phf12	ENSMUST00000141620	retained_intron		11	1	78023595	576
ENSMUSG00000015653	protein_coding	Steap2	ENSMUST00000148333	protein_coding		5	-1	5694326	1574
ENSMUSG00000047747	protein_coding	Rnf150	ENSMUST00000211714	processed_transcript		8	1	82863814	3973
ENSMUSG00000109876	antisense	Gm45449	ENSMUST00000211485	antisense		8	-1	83086957	1960
ENSMUSG00000051079	protein_coding	Rgs13	ENSMUST00000111941	protein_coding	principal1	1	-1	144177275	1545
ENSMUSG00000015653	protein_coding	Steap2	ENSMUST00000150238	retained_intron		5	-1	5694533	2552
ENSMUSG00000109600	processed_pseudogene	Gm18212	ENSMUST00000211678	processed_pseudogene		8	1	82952512	889
ENSMUSG00000023800	protein_coding	Tiam2	ENSMUST00000072156	protein_coding	principal1	17	1	3397207	6127
ENSMUSG00000103258	TEC	Gm37518	ENSMUST00000194930	TEC		7	1	119498677	2603
ENSMUSG00000029640	protein_coding	Usp12	ENSMUST00000085614	protein_coding	principal1	5	-1	146795006	4327
ENSMUSG00000037791	protein_coding	Phf12	ENSMUST00000153747	nonsense_mediated_decay		11	1	78023629	670
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000120213	protein_coding	principal1	8	-1	91133997	2200
ENSMUSG00000031640	protein_coding	Gm45753	ENSMUST00000116473	nonsense_mediated_decay	principal1	8	-1	45308466	2753
ENSMUSG00000118190	lincRNA	Gm50411	ENSMUST00000235911	lincRNA		19	1	59690734	367
ENSMUSG00000098014	sense_intronic	Gm26967	ENSMUST00000182878	sense_intronic		7	-1	119514302	2303
ENSMUSG00000082637	processed_pseudogene	Gm11248	ENSMUST00000119568	processed_pseudogene		4	1	83121541	201
ENSMUSG00000015653	protein_coding	Steap2	ENSMUST00000164219	protein_coding	principal1	5	-1	5683063	10089
ENSMUSG00000090965	lincRNA	Gm17203	ENSMUST00000164379	lincRNA		19	-1	59901062	4017
ENSMUSG00000037791	protein_coding	Phf12	ENSMUST00000131680	nonsense_mediated_decay		11	1	78023696	636
ENSMUSG00000083245	processed_pseudogene	Gm11185	ENSMUST00000117732	processed_pseudogene		4	1	83193988	1007
ENSMUSG00000100239	unprocessed_pseudogene	Gm28146	ENSMUST00000185517	unprocessed_pseudogene		Y	-1	8345010	701
ENSMUSG00000050762	protein_coding	Prss27	ENSMUST00000059482	protein_coding	principal1	17	1	24038144	1253
ENSMUSG00000100460	processed_pseudogene	Gm28145	ENSMUST00000189742	processed_pseudogene		Y	-1	8358375	380
ENSMUSG00000023800	protein_coding	Tiam2	ENSMUST00000226905	retained_intron		17	1	3397230	3303
ENSMUSG00000037791	protein_coding	Phf12	ENSMUST00000123662	nonsense_mediated_decay		11	1	78023719	413
ENSMUSG00000023800	protein_coding	Tiam2	ENSMUST00000226748	retained_intron		17	1	3439773	1133
ENSMUSG00000101331	unprocessed_pseudogene	Gm28148	ENSMUST00000186924	unprocessed_pseudogene		Y	-1	8382101	697
ENSMUSG00000056476	protein_coding	Med12l	ENSMUST00000199659	protein_coding	principal2	3	1	59006487	11006
ENSMUSG00000001054	protein_coding	Rmnd5b	ENSMUST00000136020	nonsense_mediated_decay		11	-1	51635647	1498
ENSMUSG00000022285	protein_coding	Ywhaz	ENSMUST00000022894	protein_coding	principal1	15	-1	36794538	3288
ENSMUSG00000023800	protein_coding	Tiam2	ENSMUST00000227405	nonsense_mediated_decay		17	1	3454246	2827
ENSMUSG00000037791	protein_coding	Phf12	ENSMUST00000125079	retained_intron		11	1	78028110	600
ENSMUSG00000019761	protein_coding	Krt10	ENSMUST00000103131	protein_coding	principal1	11	-1	99389364	2094
ENSMUSG00000029640	protein_coding	Usp12	ENSMUST00000138202	processed_transcript		5	-1	146758448	3914
ENSMUSG00000023800	protein_coding	Tiam2	ENSMUST00000227604	protein_coding		17	1	3482208	929
ENSMUSG00000029640	protein_coding	Usp12	ENSMUST00000124009	processed_transcript		5	-1	146758456	543
ENSMUSG00000014177	protein_coding	Tvp23b	ENSMUST00000014321	protein_coding	principal1	11	1	62879455	1784
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000120349	protein_coding	principal1	8	-1	91134465	2153
ENSMUSG00000019761	protein_coding	Krt10	ENSMUST00000211768	protein_coding		11	-1	99386097	557
ENSMUSG00000056476	protein_coding	Med12l	ENSMUST00000197374	nonsense_mediated_decay		3	1	59257062	3900
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000026823	protein_coding	principal3	17	-1	25942048	3173
ENSMUSG00000007655	protein_coding	Cav1	ENSMUST00000007799	protein_coding	principal3	6	1	17306335	2522
ENSMUSG00000022285	protein_coding	Ywhaz	ENSMUST00000110361	protein_coding	principal1	15	-1	36794531	2285
ENSMUSG00000063268	protein_coding	Parp10	ENSMUST00000165738	protein_coding	principal1	15	-1	76243420	3367
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000208043	protein_coding	principal3	17	-1	25942823	2987
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000125257	protein_coding	principal1	8	-1	91134027	2079
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000237570	protein_coding	alternative2	17	-1	25944936	2931
ENSMUSG00000019815	protein_coding	Zc2hc1b	ENSMUST00000019954	protein_coding	principal1	10	-1	13178023	1157
ENSMUSG00000007655	protein_coding	Cav1	ENSMUST00000115456	protein_coding	principal3	6	1	17306345	995
ENSMUSG00000022285	protein_coding	Ywhaz	ENSMUST00000110362	protein_coding	principal1	15	-1	36793837	2122
ENSMUSG00000058550	protein_coding	Dppa4	ENSMUST00000231359	retained_intron		16	1	48283733	408
ENSMUSG00000056476	protein_coding	Med12l	ENSMUST00000029393	protein_coding		3	1	59006978	2295
ENSMUSG00000074228	TEC	Gm10645	ENSMUST00000238241	TEC		8	-1	83166170	1088
ENSMUSG00000074228	TEC	Gm10645	ENSMUST00000098605	TEC		8	-1	83166170	1090
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000109609	protein_coding	principal1	8	-1	91134023	1171
ENSMUSG00000007655	protein_coding	Cav1	ENSMUST00000115455	protein_coding		6	1	17306410	386
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000133744	retained_intron		14	1	48446352	2996
ENSMUSG00000019815	protein_coding	Zc2hc1b	ENSMUST00000219970	processed_transcript		10	-1	13178023	991
ENSMUSG00000090121	protein_coding	Abhd12b	ENSMUST00000162570	retained_intron		12	1	70154142	3028
ENSMUSG00000022285	protein_coding	Ywhaz	ENSMUST00000154879	retained_intron		15	-1	36793519	924
ENSMUSG00000022285	protein_coding	Ywhaz	ENSMUST00000226851	protein_coding		15	-1	36796929	628
ENSMUSG00000063268	protein_coding	Parp10	ENSMUST00000166151	retained_intron		15	-1	76243434	3407
ENSMUSG00000097760	processed_transcript	6030442K20Rik	ENSMUST00000180835	antisense		1	-1	132477045	1540
ENSMUSG00000007655	protein_coding	Cav1	ENSMUST00000130505	processed_transcript		6	1	17306411	461
ENSMUSG00000097760	processed_transcript	6030442K20Rik	ENSMUST00000188203	retained_intron		1	-1	132477064	1006
ENSMUSG00000014177	protein_coding	Tvp23b	ENSMUST00000128698	processed_transcript		11	1	62879490	788
ENSMUSG00000090121	protein_coding	Abhd12b	ENSMUST00000182512	nonsense_mediated_decay		12	1	70154157	1647
ENSMUSG00000090121	protein_coding	Abhd12b	ENSMUST00000182782	nonsense_mediated_decay		12	1	70154157	1471
ENSMUSG00000007655	protein_coding	Cav1	ENSMUST00000177234	nonsense_mediated_decay		6	1	17306411	483
ENSMUSG00000014177	protein_coding	Tvp23b	ENSMUST00000154176	processed_transcript		11	1	62879614	602
ENSMUSG00000101177	transcribed_unprocessed_pseudogene	Gm29586	ENSMUST00000186478	processed_transcript		Y	-1	65754999	1136
ENSMUSG00000014177	protein_coding	Tvp23b	ENSMUST00000140377	processed_transcript		11	1	62883662	349
ENSMUSG00000022285	protein_coding	Ywhaz	ENSMUST00000126184	protein_coding		15	-1	36792414	580
ENSMUSG00000007655	protein_coding	Cav1	ENSMUST00000150901	protein_coding		6	1	17306423	380
ENSMUSG00000056476	protein_coding	Med12l	ENSMUST00000040325	protein_coding	alternative2	3	1	59006978	10159
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000111735	protein_coding	principal3	14	1	48446382	5485
ENSMUSG00000001054	protein_coding	Rmnd5b	ENSMUST00000001081	protein_coding	principal1	11	-1	51635896	1946
ENSMUSG00000056476	protein_coding	Med12l	ENSMUST00000164225	protein_coding	alternative2	3	1	59006978	10264
ENSMUSG00000022285	protein_coding	Ywhaz	ENSMUST00000151635	protein_coding		15	-1	36793210	188
ENSMUSG00000063268	protein_coding	Parp10	ENSMUST00000075689	protein_coding	principal1	15	-1	76243441	3284
ENSMUSG00000005615	protein_coding	Pcyt1a	ENSMUST00000115137	protein_coding		16	1	32430921	4244
ENSMUSG00000030968	protein_coding	Pdilt	ENSMUST00000033267	protein_coding	principal1	7	-1	119523489	2146
ENSMUSG00000001054	protein_coding	Rmnd5b	ENSMUST00000147009	protein_coding		11	-1	51625834	601
ENSMUSG00000005320	protein_coding	Fgfr4	ENSMUST00000005452	protein_coding	principal1	13	1	55152640	3324
ENSMUSG00000007655	protein_coding	Cav1	ENSMUST00000123439	protein_coding		6	1	17307048	323
ENSMUSG00000022285	protein_coding	Ywhaz	ENSMUST00000110359	protein_coding		15	-1	36794547	374
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000211050	nonsense_mediated_decay		8	-1	91133969	738
ENSMUSG00000001054	protein_coding	Rmnd5b	ENSMUST00000132854	processed_transcript		11	-1	51635753	494
ENSMUSG00000063268	protein_coding	Parp10	ENSMUST00000169255	processed_transcript		15	-1	76234253	512
ENSMUSG00000022285	protein_coding	Ywhaz	ENSMUST00000227067	processed_transcript		15	-1	36796929	388
ENSMUSG00000007655	protein_coding	Cav1	ENSMUST00000115454	protein_coding	alternative1	6	1	17307278	613
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000153765	nonsense_mediated_decay		14	1	48446393	1826
ENSMUSG00000063268	protein_coding	Parp10	ENSMUST00000170851	retained_intron		15	-1	76234473	474
ENSMUSG00000078685	unprocessed_pseudogene	Mup-ps4	ENSMUST00000151005	unprocessed_pseudogene		4	1	60437362	539
ENSMUSG00000005320	protein_coding	Fgfr4	ENSMUST00000162967	processed_transcript		13	1	55155683	438
ENSMUSG00000036362	protein_coding	P2ry13	ENSMUST00000040622	protein_coding	principal1	3	-1	59210882	2528
ENSMUSG00000030968	protein_coding	Pdilt	ENSMUST00000208275	nonsense_mediated_decay		7	-1	119498785	603
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000156480	retained_intron		14	1	48446398	3000
ENSMUSG00000094202	processed_pseudogene	Mup-ps26	ENSMUST00000121751	processed_pseudogene		4	1	60479408	202
ENSMUSG00000005320	protein_coding	Fgfr4	ENSMUST00000162167	retained_intron		13	1	55156117	590
ENSMUSG00000084000	processed_pseudogene	Gm14653	ENSMUST00000122069	processed_pseudogene		X	1	46126999	1533
ENSMUSG00000081491	processed_pseudogene	Gm12778	ENSMUST00000122341	processed_pseudogene		7	1	34175712	333
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000148045	retained_intron		17	-1	25941883	3278
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000227942	retained_intron		14	1	48453062	2542
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000210426	processed_transcript		8	-1	91199976	811
ENSMUSG00000007655	protein_coding	Cav1	ENSMUST00000115453	protein_coding	alternative1	6	1	17307640	2746
ENSMUSG00000085157	antisense	4930515L19Rik	ENSMUST00000152352	antisense		X	-1	46328911	769
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000228697	protein_coding	alternative2	14	1	48472322	729
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000211618	processed_transcript		8	-1	91133997	409
ENSMUSG00000007655	protein_coding	Cav1	ENSMUST00000133065	processed_transcript		6	1	17307723	345
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000119336	protein_coding	principal1	10	1	81628635	3561
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000226373	retained_intron		14	1	48479553	3244
ENSMUSG00000100101	lincRNA	Gm29591	ENSMUST00000188215	lincRNA		6	1	17347733	357
ENSMUSG00000079363	protein_coding	Gbp4	ENSMUST00000100962	protein_coding	principal1	5	-1	105139586	4538
ENSMUSG00000036339	protein_coding	Tmem260	ENSMUST00000226344	retained_intron		14	1	48505986	1963
ENSMUSG00000109493	protein_coding	Gm45208	ENSMUST00000208156	protein_coding	principal1	X	1	7722245	1153
ENSMUSG00000023800	protein_coding	Tiam2	ENSMUST00000226997	processed_transcript		17	1	3482315	2131
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000097368	protein_coding	alternative2	17	-1	25941935	3233
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000209444	protein_coding		8	-1	91133772	474
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000129622	protein_coding		10	1	81628706	414
ENSMUSG00000046615	protein_coding	Actrt1	ENSMUST00000059466	protein_coding	principal1	X	1	46329007	1339
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000208071	protein_coding	alternative2	17	-1	25941894	2926
ENSMUSG00000115316	TEC	Gm49096	ENSMUST00000227321	TEC		14	1	48530358	2308
ENSMUSG00000101177	transcribed_unprocessed_pseudogene	Gm29586	ENSMUST00000185225	processed_transcript		Y	-1	65754999	1104
ENSMUSG00000109493	protein_coding	Gm45208	ENSMUST00000207461	nonsense_mediated_decay		X	1	7726983	744
ENSMUSG00000115725	lincRNA	4930572G02Rik	ENSMUST00000228808	lincRNA		14	1	48537991	1697
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000207073	protein_coding		17	-1	25931551	586
ENSMUSG00000115725	lincRNA	4930572G02Rik	ENSMUST00000228794	lincRNA		14	1	48538322	2413
ENSMUSG00000023800	protein_coding	Tiam2	ENSMUST00000226913	processed_transcript		17	1	3483490	3184
ENSMUSG00000081551	processed_pseudogene	Gm14654	ENSMUST00000118620	processed_pseudogene		X	1	46361460	447
ENSMUSG00000090121	protein_coding	Abhd12b	ENSMUST00000182927	protein_coding	alternative2	12	1	70154157	1544
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000002902	protein_coding	principal1	9	1	21411837	1316
ENSMUSG00000115725	lincRNA	4930572G02Rik	ENSMUST00000227318	lincRNA		14	1	48538359	381
ENSMUSG00000023800	protein_coding	Tiam2	ENSMUST00000226434	processed_transcript		17	1	3490463	2278
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000209311	protein_coding		8	-1	91199971	391
ENSMUSG00000115725	lincRNA	4930572G02Rik	ENSMUST00000227169	lincRNA		14	1	48557568	4024
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000123929	nonsense_mediated_decay		17	-1	25934801	779
ENSMUSG00000079363	protein_coding	Gbp4	ENSMUST00000196677	protein_coding		5	-1	105139545	709
ENSMUSG00000101177	transcribed_unprocessed_pseudogene	Gm29586	ENSMUST00000187684	processed_transcript		Y	-1	65754911	249
ENSMUSG00000101177	transcribed_unprocessed_pseudogene	Gm29586	ENSMUST00000189070	processed_transcript		Y	-1	65754911	302
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000211042	retained_intron		8	-1	91133997	3533
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000207496	nonsense_mediated_decay		17	-1	25931779	586
ENSMUSG00000090121	protein_coding	Abhd12b	ENSMUST00000169156	protein_coding	principal2	12	1	70154157	1775
ENSMUSG00000115330	processed_pseudogene	Gm49221	ENSMUST00000226386	processed_pseudogene		17	-1	3347067	357
ENSMUSG00000115725	lincRNA	4930572G02Rik	ENSMUST00000227361	lincRNA		14	1	48560807	839
ENSMUSG00000079363	protein_coding	Gbp4	ENSMUST00000199629	protein_coding		5	-1	105139544	768
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000153201	processed_transcript		8	-1	91133917	139
ENSMUSG00000091530	protein_coding	Cldn20	ENSMUST00000232647	processed_pseudogene		17	1	3532554	656
ENSMUSG00000101177	transcribed_unprocessed_pseudogene	Gm29586	ENSMUST00000187593	processed_transcript		Y	-1	65754917	655
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000207777	processed_transcript		17	-1	25936061	621
ENSMUSG00000035202	protein_coding	Lars2	ENSMUST00000038863	protein_coding	principal1	9	1	123366927	3894
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000213967	retained_intron		9	1	21411844	507
ENSMUSG00000091530	protein_coding	Cldn20	ENSMUST00000168560	protein_coding	principal1	17	1	3532554	660
ENSMUSG00000090121	protein_coding	Abhd12b	ENSMUST00000161541	retained_intron		12	1	70182048	694
ENSMUSG00000031667	protein_coding	Aktip	ENSMUST00000211576	processed_transcript		8	-1	91199964	450
ENSMUSG00000005615	protein_coding	Pcyt1a	ENSMUST00000079791	protein_coding	principal1	16	1	32430924	4789
ENSMUSG00000079363	protein_coding	Gbp4	ENSMUST00000197799	protein_coding		5	-1	105139540	736
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000139078	retained_intron		17	-1	25931640	1014
ENSMUSG00000110106	antisense	Gm45666	ENSMUST00000211474	antisense		8	1	91160516	277
ENSMUSG00000035202	protein_coding	Lars2	ENSMUST00000215674	retained_intron		9	1	123366930	1598
ENSMUSG00000005615	protein_coding	Pcyt1a	ENSMUST00000141421	retained_intron		16	1	32430938	643
ENSMUSG00000101177	transcribed_unprocessed_pseudogene	Gm29586	ENSMUST00000187326	processed_transcript		Y	-1	65752977	324
ENSMUSG00000079363	protein_coding	Gbp4	ENSMUST00000198278	retained_intron		5	-1	105139551	3165
ENSMUSG00000109727	sense_intronic	Gm45464	ENSMUST00000210728	sense_intronic		8	-1	91116671	2844
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000135253	protein_coding		17	-1	25936834	681
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000137470	processed_transcript		X	1	7714333	411
ENSMUSG00000035202	protein_coding	Lars2	ENSMUST00000214074	retained_intron		9	1	123366947	3415
ENSMUSG00000101177	transcribed_unprocessed_pseudogene	Gm29586	ENSMUST00000191130	processed_transcript		Y	-1	65754942	542
ENSMUSG00000101177	transcribed_unprocessed_pseudogene	Gm29586	ENSMUST00000189745	transcribed_unprocessed_pseudogene		Y	-1	65753414	615
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000156924	retained_intron		17	-1	25931008	763
ENSMUSG00000024457	protein_coding	Trim26	ENSMUST00000124307	retained_intron		17	1	36837134	522
ENSMUSG00000045340	protein_coding	Vmn1r70	ENSMUST00000226255	protein_coding	principal2	7	1	10631532	4868
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000208242	nonsense_mediated_decay		17	-1	25935067	389
ENSMUSG00000045340	protein_coding	Vmn1r70	ENSMUST00000226182	retained_intron		7	1	10631532	4999
ENSMUSG00000005615	protein_coding	Pcyt1a	ENSMUST00000141772	retained_intron		16	1	32430945	1539
ENSMUSG00000045340	protein_coding	Vmn1r70	ENSMUST00000228090	protein_coding	alternative2	7	1	10631532	3185
ENSMUSG00000025856	protein_coding	Pdgfa	ENSMUST00000076095	protein_coding	principal2	5	-1	138995037	2060
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000140304	protein_coding		17	-1	25941935	1835
ENSMUSG00000045340	protein_coding	Vmn1r70	ENSMUST00000055847	protein_coding	principal2	7	1	10633587	897
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000208499	protein_coding		17	-1	25936834	107
ENSMUSG00000005615	protein_coding	Pcyt1a	ENSMUST00000123199	retained_intron		16	1	32431020	502
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000216527	nonsense_mediated_decay		9	1	21411845	370
ENSMUSG00000093534	unprocessed_pseudogene	Vmn1r-ps51	ENSMUST00000175667	unprocessed_pseudogene		7	1	10650299	320
ENSMUSG00000024457	protein_coding	Trim26	ENSMUST00000134325	retained_intron		17	1	36837141	4338
ENSMUSG00000036353	protein_coding	P2ry12	ENSMUST00000196583	protein_coding	principal1	3	-1	59227581	2344
ENSMUSG00000005615	protein_coding	Pcyt1a	ENSMUST00000115140	protein_coding	principal1	16	1	32431230	1857
ENSMUSG00000020173	protein_coding	Cobl	ENSMUST00000172919	protein_coding		11	-1	12464804	2566
ENSMUSG00000020524	protein_coding	Gria1	ENSMUST00000125292	protein_coding		11	1	57011387	287
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000139226	protein_coding		17	-1	25941933	946
ENSMUSG00000051934	protein_coding	Spats2	ENSMUST00000230628	protein_coding		15	1	99125916	863
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000123993	nonsense_mediated_decay		10	1	81633699	3161
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000124032	retained_intron		17	-1	25941929	1103
ENSMUSG00000035202	protein_coding	Lars2	ENSMUST00000217116	nonsense_mediated_decay		9	1	123366954	3756
ENSMUSG00000036983	protein_coding	Tfb1m	ENSMUST00000041003	protein_coding	principal1	17	-1	3557781	1402
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000140345	protein_coding		10	1	81633703	413
ENSMUSG00000035202	protein_coding	Lars2	ENSMUST00000216843	protein_coding		9	1	123367003	720
ENSMUSG00000021770	protein_coding	Samd8	ENSMUST00000022292	protein_coding		14	1	21750531	1574
ENSMUSG00000005615	protein_coding	Pcyt1a	ENSMUST00000104893	protein_coding	principal1	16	1	32431249	1275
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000145745	protein_coding		17	-1	25942862	679
ENSMUSG00000036353	protein_coding	P2ry12	ENSMUST00000050360	protein_coding	principal1	3	-1	59262831	2250
ENSMUSG00000005615	protein_coding	Pcyt1a	ENSMUST00000231920	retained_intron		16	1	32462940	1129
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000087133	protein_coding	alternative1	5	1	76529311	3371
ENSMUSG00000035202	protein_coding	Lars2	ENSMUST00000215464	protein_coding		9	1	123377736	554
ENSMUSG00000025856	protein_coding	Pdgfa	ENSMUST00000046901	protein_coding	alternative1	5	-1	138994953	1543
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000148307	protein_coding		17	-1	25944510	375
ENSMUSG00000036983	protein_coding	Tfb1m	ENSMUST00000232131	processed_transcript		17	-1	3557754	485
ENSMUSG00000035202	protein_coding	Lars2	ENSMUST00000214557	retained_intron		9	1	123418135	2441
ENSMUSG00000035202	protein_coding	Lars2	ENSMUST00000213711	retained_intron		9	1	123454506	787
ENSMUSG00000034394	protein_coding	Lif	ENSMUST00000066283	protein_coding	principal1	11	1	4257557	4026
ENSMUSG00000036353	protein_coding	P2ry12	ENSMUST00000199609	protein_coding	principal1	3	-1	59262871	2157
ENSMUSG00000036983	protein_coding	Tfb1m	ENSMUST00000232051	processed_transcript		17	-1	3557734	2419
ENSMUSG00000025728	protein_coding	Pigq	ENSMUST00000148382	protein_coding		17	-1	25942832	368
ENSMUSG00000035202	protein_coding	Lars2	ENSMUST00000215087	retained_intron		9	1	123454790	889
ENSMUSG00000058550	protein_coding	Dppa4	ENSMUST00000096045	protein_coding	principal4	16	1	48283735	1479
ENSMUSG00000000296	protein_coding	Tpd52l1	ENSMUST00000000305	protein_coding	principal2	10	-1	31445958	1308
ENSMUSG00000034394	protein_coding	Lif	ENSMUST00000154927	processed_transcript		11	1	4266796	390
ENSMUSG00000036353	protein_coding	P2ry12	ENSMUST00000199675	protein_coding		3	-1	59220200	619
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000214681	nonsense_mediated_decay		9	1	21411858	776
ENSMUSG00000021770	protein_coding	Samd8	ENSMUST00000144061	nonsense_mediated_decay		14	1	21750548	1613
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000113493	protein_coding	principal3	5	1	76529323	3371
ENSMUSG00000036353	protein_coding	P2ry12	ENSMUST00000170388	protein_coding	principal1	3	-1	59220259	2101
ENSMUSG00000034394	protein_coding	Lif	ENSMUST00000040750	protein_coding		11	1	4267095	3798
ENSMUSG00000056863	protein_coding	Olfr702	ENSMUST00000219803	protein_coding	principal1	7	-1	106833893	1646
ENSMUSG00000021770	protein_coding	Samd8	ENSMUST00000119430	protein_coding	principal1	14	1	21751552	6801
ENSMUSG00000000296	protein_coding	Tpd52l1	ENSMUST00000214644	protein_coding		10	-1	31445854	1103
ENSMUSG00000056863	protein_coding	Olfr702	ENSMUST00000208895	protein_coding		7	-1	106824666	518
ENSMUSG00000051431	protein_coding	Gpr87	ENSMUST00000199833	retained_intron		3	-1	59180114	1192
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000213718	nonsense_mediated_decay		9	1	21411859	635
ENSMUSG00000058550	protein_coding	Dppa4	ENSMUST00000050705	protein_coding	alternative2	16	1	48283787	1271
ENSMUSG00000025856	protein_coding	Pdgfa	ENSMUST00000110897	protein_coding	principal2	5	-1	138996087	1287
ENSMUSG00000056863	protein_coding	Olfr702	ENSMUST00000208864	protein_coding		7	-1	106833893	645
ENSMUSG00000021770	protein_coding	Samd8	ENSMUST00000142023	retained_intron		14	1	21791872	722
ENSMUSG00000095626	lincRNA	Gm21572	ENSMUST00000186850	lincRNA		Y	-1	31802737	174
ENSMUSG00000055048	antisense	Gm9962	ENSMUST00000186595	antisense		7	1	57387272	1417
ENSMUSG00000087376	protein_coding	Gm15517	ENSMUST00000124863	protein_coding	principal1	7	1	44261447	251
ENSMUSG00000095626	lincRNA	Gm21572	ENSMUST00000180134	lincRNA		Y	-1	31802731	498
ENSMUSG00000055048	antisense	Gm9962	ENSMUST00000085241	antisense		7	1	57387304	321
ENSMUSG00000000296	protein_coding	Tpd52l1	ENSMUST00000215515	protein_coding		10	-1	31445819	857
ENSMUSG00000084940	antisense	Gm15935	ENSMUST00000142076	antisense		14	1	21741543	526
ENSMUSG00000056863	protein_coding	Olfr702	ENSMUST00000080899	protein_coding	principal1	7	-1	106826743	1348
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000217188	processed_transcript		9	1	21411866	821
ENSMUSG00000109439	processed_pseudogene	Gm44853	ENSMUST00000209070	processed_pseudogene		7	-1	57719161	250
ENSMUSG00000051934	protein_coding	Spats2	ENSMUST00000229073	protein_coding		15	1	99125916	750
ENSMUSG00000087376	protein_coding	Gm15517	ENSMUST00000187314	retained_intron		7	1	44261530	359
ENSMUSG00000111938	lincRNA	2900045O20Rik	ENSMUST00000218374	lincRNA		12	1	4509317	1292
ENSMUSG00000025856	protein_coding	Pdgfa	ENSMUST00000110896	protein_coding	principal2	5	-1	138997370	1363
ENSMUSG00000000296	protein_coding	Tpd52l1	ENSMUST00000213528	protein_coding	alternative1	10	-1	31445855	969
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000214128	retained_intron		9	1	21411871	619
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000150829	retained_intron		5	1	76529328	4451
ENSMUSG00000087376	protein_coding	Gm15517	ENSMUST00000147088	retained_intron		7	1	44261561	212
ENSMUSG00000051431	protein_coding	Gpr87	ENSMUST00000200095	protein_coding	principal2	3	-1	59195104	1499
ENSMUSG00000084940	antisense	Gm15935	ENSMUST00000141004	antisense		14	1	21741565	607
ENSMUSG00000040217	processed_pseudogene	Gm6369	ENSMUST00000069626	processed_pseudogene		3	1	18533875	412
ENSMUSG00000000296	protein_coding	Tpd52l1	ENSMUST00000213639	protein_coding	alternative1	10	-1	31445797	827
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000216277	nonsense_mediated_decay		9	1	21411902	500
ENSMUSG00000051431	protein_coding	Gpr87	ENSMUST00000056898	protein_coding	alternative2	3	-1	59180085	1080
ENSMUSG00000104550	TEC	Gm43589	ENSMUST00000199400	TEC		3	1	59269786	1523
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000154707	retained_intron		10	1	81633703	4635
ENSMUSG00000095105	protein_coding	Edaradd	ENSMUST00000179308	protein_coding	principal1	13	-1	12520438	6668
ENSMUSG00000029298	protein_coding	Gbp9	ENSMUST00000031238	protein_coding	principal1	5	-1	105110276	4381
ENSMUSG00000110976	antisense	Gm48093	ENSMUST00000215166	antisense		10	1	31429993	560
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000214900	processed_transcript		9	1	21417956	380
ENSMUSG00000015994	protein_coding	Fnta	ENSMUST00000016138	protein_coding	principal1	8	-1	26015650	1930
ENSMUSG00000084940	antisense	Gm15935	ENSMUST00000141656	antisense		14	1	21741589	298
ENSMUSG00000085559	lincRNA	Gm11959	ENSMUST00000148655	lincRNA		11	1	4274089	723
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000214101	retained_intron		9	1	21419216	517
ENSMUSG00000085512	lincRNA	Gm11958	ENSMUST00000127224	lincRNA		11	1	4285460	253
ENSMUSG00000002825	protein_coding	Qtrt1	ENSMUST00000217060	protein_coding		9	1	21419446	410
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000129491	retained_intron		10	1	81633709	551
ENSMUSG00000112422	lincRNA	Gm31938	ENSMUST00000218081	lincRNA		12	1	4524113	1818
ENSMUSG00000025856	protein_coding	Pdgfa	ENSMUST00000144934	processed_transcript		5	-1	138994281	691
ENSMUSG00000015994	protein_coding	Fnta	ENSMUST00000209860	retained_intron		8	-1	26001158	806
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000126323	protein_coding		10	1	81633709	618
ENSMUSG00000027695	protein_coding	Pld1	ENSMUST00000120834	protein_coding	principal2	3	1	27938695	4849
ENSMUSG00000025856	protein_coding	Pdgfa	ENSMUST00000124080	processed_transcript		5	-1	138994484	396
ENSMUSG00000025856	protein_coding	Pdgfa	ENSMUST00000132051	processed_transcript		5	-1	138996001	378
ENSMUSG00000015994	protein_coding	Fnta	ENSMUST00000211718	retained_intron		8	-1	26000430	950
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000152892	protein_coding		10	1	81634539	572
ENSMUSG00000086135	antisense	1700001J04Rik	ENSMUST00000154037	antisense		11	-1	114186777	743
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000131470	processed_transcript		5	1	76529344	2280
ENSMUSG00000051934	protein_coding	Spats2	ENSMUST00000229147	protein_coding		15	1	99125921	1275
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000123305	nonsense_mediated_decay		10	1	81640932	625
ENSMUSG00000101166	processed_transcript	Gm28496	ENSMUST00000137742	processed_transcript		7	1	44246726	2752
ENSMUSG00000029298	protein_coding	Gbp9	ENSMUST00000196820	retained_intron		5	-1	105110277	5043
ENSMUSG00000086135	antisense	1700001J04Rik	ENSMUST00000126577	antisense		11	-1	114186674	524
ENSMUSG00000027695	protein_coding	Pld1	ENSMUST00000127139	processed_transcript		3	1	27950002	555
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000137018	retained_intron		5	1	76529358	3781
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000137978	retained_intron		10	1	81640944	3690
ENSMUSG00000086827	lincRNA	4930461C15Rik	ENSMUST00000133622	lincRNA		16	-1	58408276	1302
ENSMUSG00000027695	protein_coding	Pld1	ENSMUST00000125338	protein_coding		3	1	27950003	653
ENSMUSG00000029298	protein_coding	Gbp9	ENSMUST00000199453	processed_transcript		5	-1	105082763	555
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000049469	protein_coding	alternative1	5	1	76529358	3272
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000132458	protein_coding		10	1	81643803	829
ENSMUSG00000054708	protein_coding	Ankrd24	ENSMUST00000142390	retained_intron		10	1	81646632	289
ENSMUSG00000101166	processed_transcript	Gm28496	ENSMUST00000125318	processed_transcript		7	1	44246774	2111
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000141884	retained_intron		5	1	76541944	830
ENSMUSG00000029298	protein_coding	Gbp9	ENSMUST00000100961	protein_coding	principal1	5	-1	105139539	2701
ENSMUSG00000111857	lincRNA	1190001M18Rik	ENSMUST00000215937	lincRNA		11	-1	82975585	1270
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000202151	retained_intron		5	1	76552646	2990
ENSMUSG00000027695	protein_coding	Pld1	ENSMUST00000067757	protein_coding	principal2	3	1	27984171	4804
ENSMUSG00000100515	transcribed_processed_pseudogene	Gm17916	ENSMUST00000186137	processed_transcript		1	-1	115684619	1342
ENSMUSG00000100515	transcribed_processed_pseudogene	Gm17916	ENSMUST00000187634	transcribed_processed_pseudogene		1	-1	115670589	1187
ENSMUSG00000100515	transcribed_processed_pseudogene	Gm17916	ENSMUST00000189918	processed_transcript		1	-1	115684624	324
ENSMUSG00000015994	protein_coding	Fnta	ENSMUST00000209664	retained_intron		8	-1	26011247	966
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000132807	retained_intron		5	1	76560369	698
ENSMUSG00000045291	protein_coding	E330021D16Rik	ENSMUST00000204830	protein_coding	principal1	6	-1	136415569	1813
ENSMUSG00000001999	protein_coding	Blvra	ENSMUST00000142861	retained_intron		2	1	127070665	1460
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000143489	retained_intron		5	1	76561236	719
ENSMUSG00000027695	protein_coding	Pld1	ENSMUST00000123539	protein_coding	alternative2	3	1	27984173	3732
ENSMUSG00000045291	protein_coding	E330021D16Rik	ENSMUST00000203392	protein_coding		6	-1	136415564	649
ENSMUSG00000015994	protein_coding	Fnta	ENSMUST00000209247	retained_intron		8	-1	26004576	635
ENSMUSG00000045291	protein_coding	E330021D16Rik	ENSMUST00000058713	protein_coding	principal1	6	-1	136401830	1116
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000134521	protein_coding		5	1	76561374	369
ENSMUSG00000034438	protein_coding	Gbp8	ENSMUST00000199483	processed_transcript		5	-1	105022064	1902
ENSMUSG00000036435	protein_coding	Exoc1	ENSMUST00000143736	retained_intron		5	1	76567882	652
ENSMUSG00000027695	protein_coding	Pld1	ENSMUST00000148827	protein_coding		3	1	28031262	4239
ENSMUSG00000025239	protein_coding	Limd1	ENSMUST00000026269	protein_coding	principal1	9	1	123478706	4848
ENSMUSG00000034438	protein_coding	Gbp8	ENSMUST00000198326	retained_intron		5	-1	105053556	3382
ENSMUSG00000114433	lincRNA	Gm48488	ENSMUST00000225172	lincRNA		13	1	60176682	5324
ENSMUSG00000114433	lincRNA	Gm48488	ENSMUST00000224063	lincRNA		13	1	60178027	462
ENSMUSG00000114433	lincRNA	Gm48488	ENSMUST00000224630	lincRNA		13	1	60178059	304
ENSMUSG00000027695	protein_coding	Pld1	ENSMUST00000149017	processed_transcript		3	1	28041266	1824
ENSMUSG00000052957	protein_coding	Gas1	ENSMUST00000065086	protein_coding	alternative2	13	-1	60177365	2961
ENSMUSG00000027695	protein_coding	Pld1	ENSMUST00000131842	retained_intron		3	1	28069514	2865
ENSMUSG00000027695	protein_coding	Pld1	ENSMUST00000195622	retained_intron		3	1	28079190	3319
ENSMUSG00000052957	protein_coding	Gas1	ENSMUST00000223933	protein_coding	principal2	13	-1	60176941	1155
ENSMUSG00000025239	protein_coding	Limd1	ENSMUST00000216352	retained_intron		9	1	123478744	2986
ENSMUSG00000025239	protein_coding	Limd1	ENSMUST00000217639	protein_coding		9	1	123480610	216
ENSMUSG00000110546	processed_pseudogene	Gm45734	ENSMUST00000211916	processed_pseudogene		8	1	72035245	411
ENSMUSG00000101730	unprocessed_pseudogene	Gm28580	ENSMUST00000186767	unprocessed_pseudogene		1	-1	70068055	88
ENSMUSG00000042046	protein_coding	Dstyk	ENSMUST00000045110	protein_coding	principal1	1	1	132417555	6282
ENSMUSG00000027695	protein_coding	Pld1	ENSMUST00000126594	protein_coding		3	1	28109759	603
ENSMUSG00000110643	processed_pseudogene	Gm18924	ENSMUST00000211929	processed_pseudogene		8	-1	72036588	316
ENSMUSG00000025239	protein_coding	Limd1	ENSMUST00000213278	processed_transcript		9	1	123510064	699
ENSMUSG00000028751	protein_coding	Pla2g2e	ENSMUST00000030531	protein_coding	principal1	4	1	138877942	854
ENSMUSG00000025239	protein_coding	Limd1	ENSMUST00000214309	retained_intron		9	1	123517739	580
ENSMUSG00000110096	unprocessed_pseudogene	Gm45544	ENSMUST00000211130	unprocessed_pseudogene		8	1	72047428	88
ENSMUSG00000069998	protein_coding	Olfr372	ENSMUST00000215324	protein_coding	principal1	8	1	72041218	3542
ENSMUSG00000032101	protein_coding	Ddx25	ENSMUST00000034612	protein_coding	principal1	9	-1	35558528	6934
ENSMUSG00000028751	protein_coding	Pla2g2e	ENSMUST00000105803	protein_coding		4	1	138877971	381
ENSMUSG00000036334	protein_coding	Igsf10	ENSMUST00000193455	protein_coding	principal1	3	-1	59344159	8484
ENSMUSG00000042046	protein_coding	Dstyk	ENSMUST00000188389	protein_coding		1	1	132417604	3232
ENSMUSG00000069998	protein_coding	Olfr372	ENSMUST00000093434	protein_coding	principal1	8	1	72057660	1016
ENSMUSG00000042046	protein_coding	Dstyk	ENSMUST00000188973	processed_transcript		1	1	132418377	860
ENSMUSG00000036334	protein_coding	Igsf10	ENSMUST00000194546	protein_coding	principal1	3	-1	59344394	8393
ENSMUSG00000083130	processed_pseudogene	Gm14560	ENSMUST00000118672	processed_pseudogene		X	-1	36213034	375
ENSMUSG00000029685	protein_coding	Asb15	ENSMUST00000031696	protein_coding	principal1	6	1	24528144	2088
ENSMUSG00000110522	processed_pseudogene	Gm45735	ENSMUST00000212779	processed_pseudogene		8	-1	72079092	319
ENSMUSG00000028751	protein_coding	Pla2g2e	ENSMUST00000105804	protein_coding	principal1	4	1	138879360	786
ENSMUSG00000081159	processed_pseudogene	Gm6023	ENSMUST00000118217	processed_pseudogene		X	-1	36214129	606
ENSMUSG00000042046	protein_coding	Dstyk	ENSMUST00000187092	protein_coding		1	1	132449398	645
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000184703	protein_coding	alternative2	14	-1	21741476	902
ENSMUSG00000051934	protein_coding	Spats2	ENSMUST00000063517	protein_coding	principal1	15	1	99126556	3096
ENSMUSG00000083755	processed_pseudogene	Gm14559	ENSMUST00000121745	processed_pseudogene		X	-1	36302608	496
ENSMUSG00000029685	protein_coding	Asb15	ENSMUST00000117688	protein_coding	principal1	6	1	24556072	4371
ENSMUSG00000105280	processed_pseudogene	Pgk1-ps3	ENSMUST00000198338	processed_pseudogene		3	1	18564538	1201
ENSMUSG00000109990	unprocessed_pseudogene	Gm45543	ENSMUST00000209327	unprocessed_pseudogene		8	1	72089668	88
ENSMUSG00000036334	protein_coding	Igsf10	ENSMUST00000195983	protein_coding		3	-1	59344256	797
ENSMUSG00000104091	processed_pseudogene	Gm37317	ENSMUST00000192198	processed_pseudogene		3	-1	18610831	1024
ENSMUSG00000042046	protein_coding	Dstyk	ENSMUST00000188006	retained_intron		1	1	132454575	2279
ENSMUSG00000036334	protein_coding	Igsf10	ENSMUST00000039419	protein_coding	principal1	3	-1	59344256	10084
ENSMUSG00000104918	TEC	Gm42944	ENSMUST00000198383	TEC		3	1	18622162	3980
ENSMUSG00000093826	processed_pseudogene	Gm6900	ENSMUST00000178971	processed_pseudogene		7	-1	10656820	342
ENSMUSG00000042046	protein_coding	Dstyk	ENSMUST00000191494	retained_intron		1	1	132462409	672
ENSMUSG00000093689	unprocessed_pseudogene	Vmn1r-ps52	ENSMUST00000177426	unprocessed_pseudogene		7	-1	10667627	862
ENSMUSG00000051934	protein_coding	Spats2	ENSMUST00000229066	protein_coding		15	1	99126794	644
ENSMUSG00000061561	protein_coding	Olfr373	ENSMUST00000213940	protein_coding	principal1	8	1	72083177	4145
ENSMUSG00000104845	lincRNA	1700041I07Rik	ENSMUST00000197536	lincRNA		5	1	146795918	435
ENSMUSG00000061561	protein_coding	Olfr373	ENSMUST00000215198	protein_coding	principal1	8	1	72085710	3923
ENSMUSG00000073901	protein_coding	Olfr703	ENSMUST00000216254	protein_coding	principal1	7	1	106843360	1920
ENSMUSG00000105945	antisense	Gm43570	ENSMUST00000199951	antisense		3	-1	59006158	3688
ENSMUSG00000073901	protein_coding	Olfr703	ENSMUST00000098142	protein_coding	principal1	7	1	106844613	960
ENSMUSG00000061561	protein_coding	Olfr373	ENSMUST00000074540	protein_coding	principal1	8	1	72099762	945
ENSMUSG00000103264	processed_pseudogene	Gm30341	ENSMUST00000194363	processed_pseudogene		3	1	18753077	289
ENSMUSG00000051934	protein_coding	Spats2	ENSMUST00000229493	retained_intron		15	1	99126805	2146
ENSMUSG00000031709	protein_coding	Tbc1d9	ENSMUST00000034145	protein_coding		8	1	83165352	4631
ENSMUSG00000051934	protein_coding	Spats2	ENSMUST00000229663	protein_coding		15	1	99126822	523
ENSMUSG00000073900	protein_coding	Olfr704	ENSMUST00000080925	protein_coding	principal1	7	1	106863185	2124
ENSMUSG00000035279	protein_coding	Ssc5d	ENSMUST00000057612	protein_coding	principal1	7	1	4925785	4348
ENSMUSG00000020570	protein_coding	Sypl	ENSMUST00000076698	protein_coding	principal4	12	1	32953891	4999
ENSMUSG00000103846	TEC	Gm37809	ENSMUST00000195050	TEC		1	1	160913472	931
ENSMUSG00000051276	protein_coding	Actrt2	ENSMUST00000060062	protein_coding	principal1	4	-1	154667867	1435
ENSMUSG00000073900	protein_coding	Olfr704	ENSMUST00000217204	processed_transcript		7	1	106863185	3734
ENSMUSG00000103739	TEC	Gm37653	ENSMUST00000195401	TEC		1	1	160915324	3578
ENSMUSG00000073900	protein_coding	Olfr704	ENSMUST00000217164	processed_transcript		7	1	106863185	4118
ENSMUSG00000073900	protein_coding	Olfr704	ENSMUST00000098141	protein_coding	principal1	7	1	106864982	948
ENSMUSG00000030329	protein_coding	Pianp	ENSMUST00000032479	protein_coding	principal2	6	1	124996694	2250
ENSMUSG00000082716	processed_pseudogene	Rpl31-ps5	ENSMUST00000118086	processed_pseudogene		5	1	20806090	375
ENSMUSG00000035279	protein_coding	Ssc5d	ENSMUST00000207310	retained_intron		7	1	4937090	697
ENSMUSG00000098002	processed_pseudogene	Gm9658	ENSMUST00000182757	processed_pseudogene		15	-1	43218161	1012
ENSMUSG00000112184	processed_pseudogene	Gm48826	ENSMUST00000219452	processed_pseudogene		10	1	122066343	679
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000120984	protein_coding	alternative2	14	-1	21740401	976
ENSMUSG00000111973	processed_pseudogene	Gm48827	ENSMUST00000219495	processed_pseudogene		10	-1	122069451	316
ENSMUSG00000030329	protein_coding	Pianp	ENSMUST00000162000	protein_coding	alternative2	6	1	124996862	2396
ENSMUSG00000112815	processed_pseudogene	Gm48828	ENSMUST00000220024	processed_pseudogene		10	1	122074788	211
ENSMUSG00000050765	lincRNA	Gm5084	ENSMUST00000224064	lincRNA		13	1	60205471	3609
ENSMUSG00000030329	protein_coding	Pianp	ENSMUST00000159391	protein_coding		6	1	124997075	684
ENSMUSG00000020570	protein_coding	Sypl	ENSMUST00000020885	protein_coding	alternative2	12	1	32954184	2019
ENSMUSG00000050765	lincRNA	Gm5084	ENSMUST00000060705	lincRNA		13	1	60211933	1002
ENSMUSG00000078683	protein_coding	Mup1	ENSMUST00000103012	protein_coding	principal3	4	-1	60501960	927
ENSMUSG00000030329	protein_coding	Pianp	ENSMUST00000162170	protein_coding	principal2	6	1	124998437	2053
ENSMUSG00000114460	TEC	Gm10779	ENSMUST00000225199	TEC		13	1	60331449	2303
ENSMUSG00000053153	protein_coding	Spag16	ENSMUST00000187159	processed_transcript		1	1	69826970	1433
ENSMUSG00000027167	protein_coding	Elp4	ENSMUST00000122965	protein_coding	principal1	2	-1	105904564	3048
ENSMUSG00000020570	protein_coding	Sypl	ENSMUST00000122861	nonsense_mediated_decay		12	1	32954247	646
ENSMUSG00000053153	protein_coding	Spag16	ENSMUST00000190833	processed_transcript		1	1	69826971	1338
ENSMUSG00000030433	protein_coding	Sbk2	ENSMUST00000208109	protein_coding		7	-1	4964406	1422
ENSMUSG00000034438	protein_coding	Gbp8	ENSMUST00000112718	protein_coding	principal1	5	-1	105051047	1600
ENSMUSG00000114274	lincRNA	Gm35333	ENSMUST00000225539	lincRNA		13	-1	60434731	737
ENSMUSG00000027167	protein_coding	Elp4	ENSMUST00000028588	protein_coding		2	-1	105865982	836
ENSMUSG00000078683	protein_coding	Mup1	ENSMUST00000084548	protein_coding	alternative2	4	-1	60501903	776
ENSMUSG00000020570	protein_coding	Sypl	ENSMUST00000129592	processed_transcript		12	1	32954559	696
ENSMUSG00000062627	protein_coding	Mysm1	ENSMUST00000075872	protein_coding	principal1	4	-1	94979100	7420
ENSMUSG00000030329	protein_coding	Pianp	ENSMUST00000160704	protein_coding	principal2	6	1	124998610	1116
ENSMUSG00000114274	lincRNA	Gm35333	ENSMUST00000225281	lincRNA		13	-1	60427198	654
ENSMUSG00000031709	protein_coding	Tbc1d9	ENSMUST00000093393	protein_coding	principal1	8	1	83165860	5334
ENSMUSG00000020570	protein_coding	Sypl	ENSMUST00000131562	retained_intron		12	1	32965326	2982
ENSMUSG00000030433	protein_coding	Sbk2	ENSMUST00000182214	protein_coding	principal1	7	-1	4964345	2236
ENSMUSG00000027167	protein_coding	Elp4	ENSMUST00000152272	retained_intron		2	-1	105814322	599
ENSMUSG00000078683	protein_coding	Mup1	ENSMUST00000135953	protein_coding		4	-1	60499332	729
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000183698	protein_coding	alternative2	14	-1	21741505	1019
ENSMUSG00000020570	protein_coding	Sypl	ENSMUST00000218816	processed_transcript		12	1	32965397	529
ENSMUSG00000030329	protein_coding	Pianp	ENSMUST00000161292	protein_coding		6	1	124998639	301
ENSMUSG00000030433	protein_coding	Sbk2	ENSMUST00000183170	protein_coding		7	-1	4964354	704
ENSMUSG00000003949	protein_coding	Hlf	ENSMUST00000004051	protein_coding	principal1	11	-1	90390895	5642
ENSMUSG00000020570	protein_coding	Sypl	ENSMUST00000139339	processed_transcript		12	1	32965406	569
ENSMUSG00000027167	protein_coding	Elp4	ENSMUST00000148441	processed_transcript		2	-1	105904483	342
ENSMUSG00000030329	protein_coding	Pianp	ENSMUST00000160666	protein_coding		6	1	124999662	207
ENSMUSG00000059834	protein_coding	Sclt1	ENSMUST00000026866	protein_coding	principal1	3	-1	41742514	3005
ENSMUSG00000078683	protein_coding	Mup1	ENSMUST00000107499	protein_coding	principal3	4	-1	60501960	797
ENSMUSG00000084870	antisense	Gm13954	ENSMUST00000123441	antisense		2	1	105708999	543
ENSMUSG00000034438	protein_coding	Gbp8	ENSMUST00000031235	protein_coding	principal1	5	-1	105139540	2459
ENSMUSG00000031709	protein_coding	Tbc1d9	ENSMUST00000142673	retained_intron		8	1	83259259	744
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000119866	protein_coding	alternative2	14	-1	21741519	1342
ENSMUSG00000110422	processed_pseudogene	Gm17999	ENSMUST00000211568	processed_pseudogene		8	1	83267086	542
ENSMUSG00000062627	protein_coding	Mysm1	ENSMUST00000124820	processed_transcript		4	-1	94953388	5677
ENSMUSG00000030433	protein_coding	Sbk2	ENSMUST00000182837	processed_transcript		7	-1	4964390	490
ENSMUSG00000062627	protein_coding	Mysm1	ENSMUST00000125427	processed_transcript		4	-1	94953518	575
ENSMUSG00000035198	protein_coding	Tubg1	ENSMUST00000043680	protein_coding	principal1	11	1	101119938	1802
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000120956	protein_coding	principal3	14	-1	21742879	1070
ENSMUSG00000030433	protein_coding	Sbk2	ENSMUST00000032598	protein_coding	principal1	7	-1	4964348	1139
ENSMUSG00000094222	transcribed_unprocessed_pseudogene	Mup-ps6	ENSMUST00000179564	transcribed_unprocessed_pseudogene		4	1	60517461	545
ENSMUSG00000046881	protein_coding	Olfr374	ENSMUST00000210435	protein_coding	principal1	8	1	72107040	8718
ENSMUSG00000035198	protein_coding	Tubg1	ENSMUST00000137844	processed_transcript		11	1	101124500	852
ENSMUSG00000078575	protein_coding	Gm12887	ENSMUST00000106265	protein_coding	principal1	4	-1	121622103	360
ENSMUSG00000046881	protein_coding	Olfr374	ENSMUST00000210923	processed_transcript		8	1	72107040	1678
ENSMUSG00000086253	processed_transcript	Gm13773	ENSMUST00000156693	processed_transcript		4	1	60502841	583
ENSMUSG00000046881	protein_coding	Olfr374	ENSMUST00000209675	protein_coding	principal1	8	1	72109486	1053
ENSMUSG00000003949	protein_coding	Hlf	ENSMUST00000043658	processed_transcript		11	-1	90389690	2712
ENSMUSG00000083615	processed_pseudogene	Gm12878	ENSMUST00000118744	processed_pseudogene		4	1	121641446	332
ENSMUSG00000101761	lincRNA	Gm28297	ENSMUST00000190933	lincRNA		Y	-1	31842290	352
ENSMUSG00000101761	lincRNA	Gm28297	ENSMUST00000186679	lincRNA		Y	-1	31842290	537
ENSMUSG00000052485	protein_coding	Tmem171	ENSMUST00000064347	protein_coding	principal1	13	-1	98694834	1161
ENSMUSG00000060738	protein_coding	Prl7c1	ENSMUST00000072943	protein_coding	principal1	13	-1	27780804	1016
ENSMUSG00000114566	lincRNA	Gm48500	ENSMUST00000224075	lincRNA		13	-1	60477734	1478
ENSMUSG00000114566	lincRNA	Gm48500	ENSMUST00000225097	lincRNA		13	-1	60481298	1568
ENSMUSG00000003949	protein_coding	Hlf	ENSMUST00000107881	processed_transcript		11	-1	90388207	2476
ENSMUSG00000087370	protein_coding	Tmem170b	ENSMUST00000221694	protein_coding		13	1	41605907	602
ENSMUSG00000003949	protein_coding	Hlf	ENSMUST00000137957	processed_transcript		11	-1	90381935	896
ENSMUSG00000003949	protein_coding	Hlf	ENSMUST00000176001	protein_coding		11	-1	90387973	619
ENSMUSG00000052485	protein_coding	Tmem171	ENSMUST00000148950	protein_coding		13	-1	98694768	826
ENSMUSG00000024457	protein_coding	Trim26	ENSMUST00000130367	protein_coding	principal2	17	1	36837143	3187
ENSMUSG00000003949	protein_coding	Hlf	ENSMUST00000145786	processed_transcript		11	-1	90389590	245
ENSMUSG00000114689	lincRNA	Gm9465	ENSMUST00000224536	lincRNA		13	-1	98716510	570
ENSMUSG00000109058	protein_coding	Olfr705	ENSMUST00000213721	protein_coding	principal1	7	-1	106876891	3001
ENSMUSG00000109058	protein_coding	Olfr705	ENSMUST00000216009	protein_coding	principal1	7	-1	106876891	3085
ENSMUSG00000087370	protein_coding	Tmem170b	ENSMUST00000129449	protein_coding	principal1	13	1	41606216	7168
ENSMUSG00000090555	unprocessed_pseudogene	Gm8893	ENSMUST00000172146	unprocessed_pseudogene		12	-1	103822243	1242
ENSMUSG00000109058	protein_coding	Olfr705	ENSMUST00000060879	protein_coding	principal1	7	-1	106874243	951
ENSMUSG00000094235	processed_pseudogene	Mup-ps24	ENSMUST00000119939	processed_pseudogene		4	1	60557570	286
ENSMUSG00000048655	protein_coding	Ccdc169	ENSMUST00000052904	protein_coding		3	1	55137339	2889
ENSMUSG00000040423	protein_coding	Rc3h1	ENSMUST00000239200	nonsense_mediated_decay		1	1	160906418	11121
ENSMUSG00000024457	protein_coding	Trim26	ENSMUST00000053434	protein_coding	principal2	17	1	36837146	3198
ENSMUSG00000034867	protein_coding	Ankrd27	ENSMUST00000040844	protein_coding	principal2	7	1	35586244	4284
ENSMUSG00000024457	protein_coding	Trim26	ENSMUST00000130801	protein_coding		17	1	36837173	888
ENSMUSG00000024457	protein_coding	Trim26	ENSMUST00000144182	protein_coding		17	1	36837184	1426
ENSMUSG00000053153	protein_coding	Spag16	ENSMUST00000065425	protein_coding	principal1	1	1	69826988	2126
ENSMUSG00000109941	protein_coding	Exosc6	ENSMUST00000210390	protein_coding	principal1	8	1	111056339	1326
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000184571	nonsense_mediated_decay		14	-1	21748620	1122
ENSMUSG00000037262	protein_coding	Kin	ENSMUST00000042512	protein_coding	principal1	2	1	10080624	1472
ENSMUSG00000034867	protein_coding	Ankrd27	ENSMUST00000188906	protein_coding		7	1	35586250	405
ENSMUSG00000024457	protein_coding	Trim26	ENSMUST00000123715	protein_coding		17	1	36837184	1406
ENSMUSG00000053153	protein_coding	Spag16	ENSMUST00000113940	protein_coding		1	1	69826992	3559
ENSMUSG00000031960	protein_coding	Aars	ENSMUST00000125268	protein_coding		8	1	111033144	709
ENSMUSG00000034867	protein_coding	Ankrd27	ENSMUST00000186245	protein_coding		7	1	35586250	1926
ENSMUSG00000053153	protein_coding	Spag16	ENSMUST00000161131	processed_transcript		1	1	69831740	983
ENSMUSG00000024457	protein_coding	Trim26	ENSMUST00000124136	protein_coding		17	1	36852502	726
ENSMUSG00000037262	protein_coding	Kin	ENSMUST00000142599	processed_transcript		2	1	10080593	600
ENSMUSG00000037262	protein_coding	Kin	ENSMUST00000142773	processed_transcript		2	1	10090297	647
ENSMUSG00000062627	protein_coding	Mysm1	ENSMUST00000149954	processed_transcript		4	-1	94979075	1995
ENSMUSG00000087437	antisense	Gm13112	ENSMUST00000138795	antisense		4	-1	154869487	1258
ENSMUSG00000024457	protein_coding	Trim26	ENSMUST00000156872	processed_transcript		17	1	36854634	2249
ENSMUSG00000053153	protein_coding	Spag16	ENSMUST00000161310	processed_transcript		1	1	69951621	1297
ENSMUSG00000024457	protein_coding	Trim26	ENSMUST00000179968	protein_coding	alternative2	17	1	36837141	3203
ENSMUSG00000087437	antisense	Gm13112	ENSMUST00000151696	antisense		4	-1	154872003	641
ENSMUSG00000099493	unprocessed_pseudogene	Gm21753	ENSMUST00000187240	unprocessed_pseudogene		Y	-1	32125099	696
ENSMUSG00000053153	protein_coding	Spag16	ENSMUST00000191569	processed_transcript		1	1	69951648	1714
ENSMUSG00000062627	protein_coding	Mysm1	ENSMUST00000134730	processed_transcript		4	-1	94979042	730
ENSMUSG00000103052	TEC	Gm38272	ENSMUST00000194431	TEC		1	-1	70312911	2400
ENSMUSG00000062627	protein_coding	Mysm1	ENSMUST00000155935	processed_transcript		4	-1	94970651	435
ENSMUSG00000062627	protein_coding	Mysm1	ENSMUST00000132758	processed_transcript		4	-1	94979078	536
ENSMUSG00000040022	protein_coding	Rab11fip2	ENSMUST00000171986	protein_coding		19	-1	59943654	5363
ENSMUSG00000104287	TEC	Gm37456	ENSMUST00000193176	TEC		1	-1	70577271	5837
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000075040	protein_coding	alternative2	14	-1	21748622	1745
ENSMUSG00000031960	protein_coding	Aars	ENSMUST00000154546	retained_intron		8	1	111033879	2221
ENSMUSG00000033676	protein_coding	Gabrb3	ENSMUST00000085240	protein_coding		7	1	57419692	5712
ENSMUSG00000062627	protein_coding	Mysm1	ENSMUST00000131575	processed_transcript		4	-1	94979053	532
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000127851	nonsense_mediated_decay		14	-1	21748642	1554
ENSMUSG00000062627	protein_coding	Mysm1	ENSMUST00000136130	processed_transcript		4	-1	94979075	704
ENSMUSG00000034867	protein_coding	Ankrd27	ENSMUST00000206472	nonsense_mediated_decay		7	1	35586255	3583
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000183893	nonsense_mediated_decay		14	-1	21748620	1123
ENSMUSG00000091408	processed_pseudogene	Gm6728	ENSMUST00000178117	processed_pseudogene		6	-1	136487186	1065
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000183943	protein_coding	alternative2	14	-1	21748626	779
ENSMUSG00000081161	unprocessed_pseudogene	Gm12783	ENSMUST00000121425	unprocessed_pseudogene		7	1	34176758	397
ENSMUSG00000071141	processed_pseudogene	Rpl36a-ps3	ENSMUST00000120093	processed_pseudogene		6	1	136488807	321
ENSMUSG00000107611	processed_pseudogene	Gm44131	ENSMUST00000203036	processed_pseudogene		6	1	136488319	394
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000183824	processed_transcript		14	-1	21748626	542
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000153071	protein_coding		14	-1	21746485	505
ENSMUSG00000033676	protein_coding	Gabrb3	ENSMUST00000196198	protein_coding		7	1	57590518	4348
ENSMUSG00000039987	protein_coding	Phtf2	ENSMUST00000118174	protein_coding	principal1	5	-1	20882124	4840
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000185042	nonsense_mediated_decay		14	-1	21748638	614
ENSMUSG00000113731	processed_pseudogene	Gm48650	ENSMUST00000223218	processed_pseudogene		13	1	8993005	234
ENSMUSG00000113466	unprocessed_pseudogene	Gm48649	ENSMUST00000221977	unprocessed_pseudogene		13	1	8966705	316
ENSMUSG00000021768	protein_coding	Dusp13	ENSMUST00000127051	processed_transcript		14	-1	21751181	641
ENSMUSG00000034867	protein_coding	Ankrd27	ENSMUST00000206157	nonsense_mediated_decay		7	1	35586275	797
ENSMUSG00000070695	protein_coding	Cntnap5a	ENSMUST00000043725	protein_coding	principal1	1	1	115684756	10945
ENSMUSG00000034867	protein_coding	Ankrd27	ENSMUST00000190503	protein_coding	alternative2	7	1	35586277	4086
ENSMUSG00000048655	protein_coding	Ccdc169	ENSMUST00000118963	protein_coding	alternative2	3	1	55140038	740
ENSMUSG00000039987	protein_coding	Phtf2	ENSMUST00000153194	nonsense_mediated_decay		5	-1	20774113	2282
ENSMUSG00000027287	protein_coding	Snap23	ENSMUST00000110711	protein_coding	principal1	2	1	120567671	2723
ENSMUSG00000102033	processed_pseudogene	Gm28263	ENSMUST00000185884	processed_pseudogene		1	1	116633777	400
ENSMUSG00000034867	protein_coding	Ankrd27	ENSMUST00000205801	retained_intron		7	1	35601426	699
ENSMUSG00000034968	protein_coding	Lbx2	ENSMUST00000041265	protein_coding	principal1	6	1	83086367	817
ENSMUSG00000048655	protein_coding	Ccdc169	ENSMUST00000061099	protein_coding	principal2	3	1	55140038	887
ENSMUSG00000034867	protein_coding	Ankrd27	ENSMUST00000187567	retained_intron		7	1	35612150	551
ENSMUSG00000063873	protein_coding	Slc24a3	ENSMUST00000153249	processed_transcript		2	1	145167919	620
ENSMUSG00000034867	protein_coding	Ankrd27	ENSMUST00000187807	protein_coding		7	1	35615948	693
ENSMUSG00000034968	protein_coding	Lbx2	ENSMUST00000151508	processed_transcript		6	1	83087338	531
ENSMUSG00000063873	protein_coding	Slc24a3	ENSMUST00000131123	processed_transcript		2	1	145606818	688
ENSMUSG00000027287	protein_coding	Snap23	ENSMUST00000028743	protein_coding	principal1	2	1	120567691	2658
ENSMUSG00000040022	protein_coding	Rab11fip2	ENSMUST00000051996	protein_coding		19	-1	59943364	4482
ENSMUSG00000048655	protein_coding	Ccdc169	ENSMUST00000153009	protein_coding		3	1	55140055	489
ENSMUSG00000039987	protein_coding	Phtf2	ENSMUST00000133784	processed_transcript		5	-1	20855191	520
ENSMUSG00000033676	protein_coding	Gabrb3	ENSMUST00000039697	protein_coding	principal1	7	1	57591162	5579
ENSMUSG00000034867	protein_coding	Ankrd27	ENSMUST00000206632	nonsense_mediated_decay		7	1	35619479	475
ENSMUSG00000039987	protein_coding	Phtf2	ENSMUST00000124431	nonsense_mediated_decay		5	-1	20805707	621
ENSMUSG00000094429	protein_coding	Gm19965	ENSMUST00000179777	protein_coding	principal1	1	1	116802983	3030
ENSMUSG00000040022	protein_coding	Rab11fip2	ENSMUST00000170819	protein_coding	principal1	19	-1	59943000	1539
ENSMUSG00000001999	protein_coding	Blvra	ENSMUST00000002064	protein_coding	principal1	2	1	127070667	1160
ENSMUSG00000101154	processed_pseudogene	Gm17777	ENSMUST00000189740	processed_pseudogene		1	-1	117393532	1276
ENSMUSG00000033676	protein_coding	Gabrb3	ENSMUST00000156375	retained_intron		7	1	57591173	701
ENSMUSG00000031129	protein_coding	Slc9a9	ENSMUST00000033463	protein_coding	principal1	9	1	94669909	3468
ENSMUSG00000033676	protein_coding	Gabrb3	ENSMUST00000138350	protein_coding		7	1	57591530	581
ENSMUSG00000001999	protein_coding	Blvra	ENSMUST00000135529	protein_coding		2	1	127070679	772
ENSMUSG00000091378	processed_transcript	Gm4219	ENSMUST00000168140	processed_transcript		19	1	59943722	2143
ENSMUSG00000048655	protein_coding	Ccdc169	ENSMUST00000159904	nonsense_mediated_decay		3	1	55142288	830
ENSMUSG00000027287	protein_coding	Snap23	ENSMUST00000116437	protein_coding		2	1	120567697	2730
ENSMUSG00000001999	protein_coding	Blvra	ENSMUST00000110389	protein_coding		2	1	127070693	657
ENSMUSG00000048655	protein_coding	Ccdc169	ENSMUST00000161120	nonsense_mediated_decay		3	1	55142288	796
ENSMUSG00000033676	protein_coding	Gabrb3	ENSMUST00000136033	retained_intron		7	1	57792128	696
ENSMUSG00000118291	processed_pseudogene	Csf1r-ps	ENSMUST00000237917	processed_pseudogene		19	1	60079432	2563
ENSMUSG00000001999	protein_coding	Blvra	ENSMUST00000142737	protein_coding		2	1	127080277	676
ENSMUSG00000108597	TEC	Gm44708	ENSMUST00000205580	TEC		7	1	57775429	2237
ENSMUSG00000118166	processed_pseudogene	Gm50296	ENSMUST00000235813	processed_pseudogene		19	-1	60093931	472
ENSMUSG00000031129	protein_coding	Slc9a9	ENSMUST00000162870	processed_transcript		9	1	94669932	1098
ENSMUSG00000039987	protein_coding	Phtf2	ENSMUST00000139325	retained_intron		5	-1	20882077	2044
ENSMUSG00000039987	protein_coding	Phtf2	ENSMUST00000140147	retained_intron		5	-1	20882078	2000
ENSMUSG00000090389	processed_pseudogene	Cdv3-ps	ENSMUST00000169632	processed_pseudogene		14	-1	43122471	827
ENSMUSG00000031129	protein_coding	Slc9a9	ENSMUST00000162329	retained_intron		9	1	95121686	1828
ENSMUSG00000027287	protein_coding	Snap23	ENSMUST00000150611	nonsense_mediated_decay		2	1	120567721	791
ENSMUSG00000089709	antisense	Gm16262	ENSMUST00000162306	antisense		9	-1	94702319	1751
ENSMUSG00000039987	protein_coding	Phtf2	ENSMUST00000156044	nonsense_mediated_decay		5	-1	20882045	480
ENSMUSG00000078600	processed_transcript	1700092K14Rik	ENSMUST00000106604	processed_transcript		11	1	114198258	395
ENSMUSG00000111087	processed_pseudogene	Gm47168	ENSMUST00000214362	processed_pseudogene		9	-1	94992684	670
ENSMUSG00000027287	protein_coding	Snap23	ENSMUST00000147864	retained_intron		2	1	120567723	791
ENSMUSG00000085844	lincRNA	Gm11690	ENSMUST00000128183	lincRNA		11	-1	114238502	1856
ENSMUSG00000016946	protein_coding	Kctd5	ENSMUST00000017090	protein_coding	principal1	17	-1	24073485	2443
ENSMUSG00000027287	protein_coding	Snap23	ENSMUST00000153580	protein_coding		2	1	120567723	481
ENSMUSG00000059834	protein_coding	Sclt1	ENSMUST00000146125	nonsense_mediated_decay		3	-1	41742028	2292
ENSMUSG00000071178	protein_coding	Serpina1b	ENSMUST00000095450	protein_coding	principal1	12	-1	103738158	1394
ENSMUSG00000027287	protein_coding	Snap23	ENSMUST00000142278	protein_coding		2	1	120567738	751
ENSMUSG00000053117	lincRNA	E330013P04Rik	ENSMUST00000065383	lincRNA		19	1	60144675	2070
ENSMUSG00000059834	protein_coding	Sclt1	ENSMUST00000148769	nonsense_mediated_decay		3	-1	41742481	2769
ENSMUSG00000016946	protein_coding	Kctd5	ENSMUST00000127755	processed_transcript		17	-1	24068287	654
ENSMUSG00000047423	protein_coding	AI837181	ENSMUST00000159759	protein_coding	principal1	19	1	5425144	1528
ENSMUSG00000016946	protein_coding	Kctd5	ENSMUST00000234555	retained_intron		17	-1	24060317	1242
ENSMUSG00000115262	lincRNA	Gm49135	ENSMUST00000226820	lincRNA		14	1	43131404	690
ENSMUSG00000071178	protein_coding	Serpina1b	ENSMUST00000186166	protein_coding	principal1	12	-1	103740515	1762
ENSMUSG00000090657	unprocessed_pseudogene	Gm8114	ENSMUST00000172225	unprocessed_pseudogene		14	-1	43135689	484
ENSMUSG00000027287	protein_coding	Snap23	ENSMUST00000137144	retained_intron		2	1	120586241	753
ENSMUSG00000059834	protein_coding	Sclt1	ENSMUST00000142908	retained_intron		3	-1	41630125	737
ENSMUSG00000053117	lincRNA	E330013P04Rik	ENSMUST00000190409	lincRNA		19	1	60144704	582
ENSMUSG00000033350	protein_coding	Chst2	ENSMUST00000036267	protein_coding	principal1	9	-1	95406722	7328
ENSMUSG00000022249	protein_coding	Ttc23l	ENSMUST00000167842	protein_coding	alternative2	15	-1	10558668	1483
ENSMUSG00000053117	lincRNA	E330013P04Rik	ENSMUST00000190698	lincRNA		19	1	60151294	2996
ENSMUSG00000071178	protein_coding	Serpina1b	ENSMUST00000187220	protein_coding		12	-1	103738158	336
ENSMUSG00000115935	TEC	4930573C08Rik	ENSMUST00000229754	TEC		15	-1	69234999	1069
ENSMUSG00000047423	protein_coding	AI837181	ENSMUST00000054477	protein_coding		19	1	5425157	1529
ENSMUSG00000027287	protein_coding	Snap23	ENSMUST00000130759	processed_transcript		2	1	120590514	405
ENSMUSG00000107499	protein_coding	Ccdc142	ENSMUST00000101254	protein_coding	principal1	6	1	83101601	2317
ENSMUSG00000104644	processed_pseudogene	Gm2314	ENSMUST00000200391	processed_pseudogene		5	1	145400868	586
ENSMUSG00000117771	processed_pseudogene	Gm25432	ENSMUST00000237006	processed_pseudogene		19	1	5435998	728
ENSMUSG00000053117	lincRNA	E330013P04Rik	ENSMUST00000235893	lincRNA		19	1	60151527	439
ENSMUSG00000030972	protein_coding	Acsm5	ENSMUST00000207796	nonsense_mediated_decay		7	1	119519463	2272
ENSMUSG00000105764	processed_pseudogene	Gm42859	ENSMUST00000199572	processed_pseudogene		5	1	145409648	193
ENSMUSG00000117845	processed_pseudogene	Gm31070	ENSMUST00000235672	processed_pseudogene		19	-1	5439521	173
ENSMUSG00000113459	lincRNA	Gm30655	ENSMUST00000220498	lincRNA		13	1	63575051	1383
ENSMUSG00000113459	lincRNA	Gm30655	ENSMUST00000222732	lincRNA		13	1	63577810	2808
ENSMUSG00000103755	TEC	Gm37805	ENSMUST00000192612	TEC		9	1	95407461	1094
ENSMUSG00000022249	protein_coding	Ttc23l	ENSMUST00000022857	protein_coding	principal2	15	-1	10558668	1931
ENSMUSG00000031452	protein_coding	1700029H14Rik	ENSMUST00000209207	nonsense_mediated_decay		8	-1	13562461	1332
ENSMUSG00000113453	lincRNA	Gm30709	ENSMUST00000221519	lincRNA		13	-1	63626881	1003
ENSMUSG00000031452	protein_coding	1700029H14Rik	ENSMUST00000151400	protein_coding	alternative2	8	-1	13562461	1216
ENSMUSG00000113453	lincRNA	Gm30709	ENSMUST00000223134	lincRNA		13	-1	63627350	751
ENSMUSG00000101281	processed_pseudogene	Gm8449	ENSMUST00000185532	processed_pseudogene		9	-1	95411656	988
ENSMUSG00000071178	protein_coding	Serpina1b	ENSMUST00000164454	protein_coding	principal1	12	-1	103830373	1760
ENSMUSG00000075431	lincRNA	Gm11691	ENSMUST00000130963	lincRNA		11	1	114251843	658
ENSMUSG00000113453	lincRNA	Gm30709	ENSMUST00000222476	lincRNA		13	-1	63627379	956
ENSMUSG00000100993	unprocessed_pseudogene	Gm21895	ENSMUST00000189997	unprocessed_pseudogene		Y	-1	65790250	696
ENSMUSG00000059834	protein_coding	Sclt1	ENSMUST00000140373	retained_intron		3	-1	41673275	2865
ENSMUSG00000107499	protein_coding	Ccdc142	ENSMUST00000203533	retained_intron		6	1	83101658	2197
ENSMUSG00000101459	processed_pseudogene	Gm19193	ENSMUST00000190263	processed_pseudogene		9	1	95425630	590
ENSMUSG00000090796	unprocessed_pseudogene	Gm3141	ENSMUST00000168726	unprocessed_pseudogene		14	-1	43149893	499
ENSMUSG00000113700	processed_pseudogene	Gm47387	ENSMUST00000221930	processed_pseudogene		13	1	63661797	365
ENSMUSG00000107499	protein_coding	Ccdc142	ENSMUST00000134891	retained_intron		6	1	83107101	447
ENSMUSG00000059834	protein_coding	Sclt1	ENSMUST00000154773	nonsense_mediated_decay		3	-1	41664003	493
ENSMUSG00000022249	protein_coding	Ttc23l	ENSMUST00000166039	processed_transcript		15	-1	10558650	629
ENSMUSG00000031918	protein_coding	Mtmr2	ENSMUST00000034396	protein_coding	principal1	9	1	13748410	3788
ENSMUSG00000085873	antisense	Ttc39aos1	ENSMUST00000154561	antisense		4	-1	109404212	333
ENSMUSG00000116167	lincRNA	4930504C09Rik	ENSMUST00000231164	lincRNA		15	1	69270533	1103
ENSMUSG00000091615	processed_pseudogene	Gm17044	ENSMUST00000168549	processed_pseudogene		15	-1	10526881	828
ENSMUSG00000114115	lincRNA	Gm30239	ENSMUST00000220776	lincRNA		13	1	12540143	780
ENSMUSG00000081548	processed_pseudogene	Gm11692	ENSMUST00000122121	processed_pseudogene		11	1	114357129	902
ENSMUSG00000031452	protein_coding	1700029H14Rik	ENSMUST00000033830	nonsense_mediated_decay		8	-1	13562405	1087
ENSMUSG00000059834	protein_coding	Sclt1	ENSMUST00000156279	retained_intron		3	-1	41717796	2233
ENSMUSG00000114115	lincRNA	Gm30239	ENSMUST00000223193	lincRNA		13	1	12543400	631
ENSMUSG00000085873	antisense	Ttc39aos1	ENSMUST00000150239	antisense		4	-1	109406155	796
ENSMUSG00000020173	protein_coding	Cobl	ENSMUST00000109650	protein_coding	alternative2	11	-1	12464859	5271
ENSMUSG00000114619	transcribed_processed_pseudogene	Gm49141	ENSMUST00000223731	processed_transcript		14	1	43168628	1241
ENSMUSG00000059834	protein_coding	Sclt1	ENSMUST00000191629	retained_intron		3	-1	41742405	887
ENSMUSG00000107189	processed_pseudogene	Gm42689	ENSMUST00000202403	processed_pseudogene		6	1	24594530	404
ENSMUSG00000114619	transcribed_processed_pseudogene	Gm49141	ENSMUST00000224919	processed_transcript		14	1	43168694	594
ENSMUSG00000114071	lincRNA	Gm47390	ENSMUST00000222256	lincRNA		13	1	63730149	560
ENSMUSG00000031452	protein_coding	1700029H14Rik	ENSMUST00000132787	processed_transcript		8	-1	13562405	385
ENSMUSG00000102436	TEC	Gm38047	ENSMUST00000193690	TEC		3	-1	41649250	1133
ENSMUSG00000030037	protein_coding	Mrpl53	ENSMUST00000113938	protein_coding	principal1	6	1	83109040	695
ENSMUSG00000114619	transcribed_processed_pseudogene	Gm49141	ENSMUST00000224591	transcribed_processed_pseudogene		14	1	43168802	233
ENSMUSG00000103135	TEC	Gm37979	ENSMUST00000193065	TEC		3	-1	19143899	712
ENSMUSG00000071177	protein_coding	Serpina1d	ENSMUST00000078869	protein_coding	principal1	12	-1	103773592	1394
ENSMUSG00000099778	lincRNA	Gm28134	ENSMUST00000188690	lincRNA		Y	-1	65799698	2166
ENSMUSG00000113825	lincRNA	1700024I08Rik	ENSMUST00000221859	lincRNA		13	-1	63677529	334
ENSMUSG00000113825	lincRNA	1700024I08Rik	ENSMUST00000222074	lincRNA		13	-1	63677495	407
ENSMUSG00000105662	lincRNA	Gm6639	ENSMUST00000198751	lincRNA		3	-1	35666163	3135
ENSMUSG00000100389	processed_pseudogene	Rbm6-ps2	ENSMUST00000186440	processed_pseudogene		1	-1	144223650	1534
ENSMUSG00000030037	protein_coding	Mrpl53	ENSMUST00000129656	retained_intron		6	1	83109120	710
ENSMUSG00000031452	protein_coding	1700029H14Rik	ENSMUST00000187391	protein_coding	principal3	8	-1	13562448	1408
ENSMUSG00000105662	lincRNA	Gm6639	ENSMUST00000196841	lincRNA		3	-1	35666011	2666
ENSMUSG00000031452	protein_coding	1700029H14Rik	ENSMUST00000134023	protein_coding	alternative2	8	-1	13562448	1319
ENSMUSG00000113825	lincRNA	1700024I08Rik	ENSMUST00000222372	lincRNA		13	-1	63734298	754
ENSMUSG00000090466	unprocessed_pseudogene	Gm17043	ENSMUST00000164621	unprocessed_pseudogene		12	-1	103804362	1283
ENSMUSG00000105662	lincRNA	Gm6639	ENSMUST00000199182	lincRNA		3	-1	35630964	800
ENSMUSG00000116483	lincRNA	Gm19782	ENSMUST00000230802	lincRNA		15	1	70011623	4212
ENSMUSG00000105662	lincRNA	Gm6639	ENSMUST00000196349	lincRNA		3	-1	35637565	429
ENSMUSG00000095098	protein_coding	Ccdc85b	ENSMUST00000179549	protein_coding	principal1	19	-1	5457894	4715
ENSMUSG00000116398	processed_pseudogene	Gm5216	ENSMUST00000231025	processed_pseudogene		15	-1	70064669	1609
ENSMUSG00000079511	protein_coding	Gm42688	ENSMUST00000101253	nonsense_mediated_decay	principal1	6	1	83101617	3628
ENSMUSG00000090989	unprocessed_pseudogene	Gm17042	ENSMUST00000167075	unprocessed_pseudogene		12	-1	103754733	1216
ENSMUSG00000095098	protein_coding	Ccdc85b	ENSMUST00000236881	protein_coding		19	-1	5457504	4165
ENSMUSG00000087578	antisense	Ccdc142os	ENSMUST00000125657	antisense		6	-1	83109054	891
ENSMUSG00000053964	protein_coding	Lgals4	ENSMUST00000208971	protein_coding	alternative2	7	1	28833854	1298
ENSMUSG00000087578	antisense	Ccdc142os	ENSMUST00000141639	antisense		6	-1	83109053	742
ENSMUSG00000062391	lincRNA	4932435O22Rik	ENSMUST00000148405	lincRNA		11	-1	114448860	3406
ENSMUSG00000062391	lincRNA	4932435O22Rik	ENSMUST00000141088	lincRNA		11	-1	114423887	3065
ENSMUSG00000087578	antisense	Ccdc142os	ENSMUST00000138422	antisense		6	-1	83108987	600
ENSMUSG00000087578	antisense	Ccdc142os	ENSMUST00000154457	antisense		6	-1	83109054	388
ENSMUSG00000020173	protein_coding	Cobl	ENSMUST00000046755	protein_coding	principal3	11	-1	12464957	5615
ENSMUSG00000086251	antisense	Gm12694	ENSMUST00000149367	antisense		4	1	94979203	748
ENSMUSG00000029217	protein_coding	Tec	ENSMUST00000071944	protein_coding	principal1	5	-1	72868444	2659
ENSMUSG00000063873	protein_coding	Slc24a3	ENSMUST00000110007	protein_coding	alternative2	2	1	145167754	4048
ENSMUSG00000045007	protein_coding	Tubg2	ENSMUST00000043654	protein_coding	principal1	11	1	101155907	1754
ENSMUSG00000094151	protein_coding	Gm7233	ENSMUST00000168619	protein_coding	principal1	14	1	43179867	1761
ENSMUSG00000002870	protein_coding	Mcm2	ENSMUST00000058011	protein_coding	principal1	6	-1	88898780	3371
ENSMUSG00000083769	processed_pseudogene	Gm11689	ENSMUST00000120766	processed_pseudogene		11	1	114664608	302
ENSMUSG00000101573	processed_pseudogene	Gm28361	ENSMUST00000188825	processed_pseudogene		1	1	117578391	474
ENSMUSG00000020173	protein_coding	Cobl	ENSMUST00000174874	protein_coding	alternative2	11	-1	12412144	5451
ENSMUSG00000116449	processed_pseudogene	Gm18155	ENSMUST00000229501	processed_pseudogene		15	1	70758053	540
ENSMUSG00000052767	processed_transcript	Gm12703	ENSMUST00000145411	processed_transcript		4	-1	95048370	2039
ENSMUSG00000031918	protein_coding	Mtmr2	ENSMUST00000155679	protein_coding		9	1	13749181	3088
ENSMUSG00000107979	lincRNA	Zfp813-ps	ENSMUST00000204773	lincRNA		1	1	117603878	618
ENSMUSG00000090385	unprocessed_pseudogene	Gm7316	ENSMUST00000165395	unprocessed_pseudogene		14	-1	43214147	445
ENSMUSG00000020173	protein_coding	Cobl	ENSMUST00000109651	protein_coding	alternative2	11	-1	12464960	5541
ENSMUSG00000027599	protein_coding	Armc1	ENSMUST00000029125	protein_coding	principal1	3	-1	19163065	3673
ENSMUSG00000101373	processed_pseudogene	Zfp813-ps	ENSMUST00000186652	processed_pseudogene		1	1	117625522	2506
ENSMUSG00000002870	protein_coding	Mcm2	ENSMUST00000204365	retained_intron		6	-1	88891915	3494
ENSMUSG00000081030	processed_pseudogene	Gm12704	ENSMUST00000119789	processed_pseudogene		4	-1	95039625	464
ENSMUSG00000063873	protein_coding	Slc24a3	ENSMUST00000137908	processed_transcript		2	1	145242611	3649
ENSMUSG00000024912	protein_coding	Fosl1	ENSMUST00000025850	protein_coding	principal1	19	1	5447547	1864
ENSMUSG00000099615	unprocessed_pseudogene	Gm28362	ENSMUST00000189430	unprocessed_pseudogene		1	1	117662291	2420
ENSMUSG00000116168	processed_pseudogene	Gm49430	ENSMUST00000229766	processed_pseudogene		15	-1	70962464	526
ENSMUSG00000002870	protein_coding	Mcm2	ENSMUST00000205165	nonsense_mediated_decay		6	-1	88893185	732
ENSMUSG00000055078	protein_coding	Gabra5	ENSMUST00000068456	protein_coding	principal1	7	-1	57510009	2671
ENSMUSG00000116191	processed_pseudogene	Gm19199	ENSMUST00000231190	processed_pseudogene		15	-1	71100191	573
ENSMUSG00000020173	protein_coding	Cobl	ENSMUST00000172956	nonsense_mediated_decay		11	-1	12464800	4488
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000032568	protein_coding	principal3	7	1	19083849	2761
ENSMUSG00000063873	protein_coding	Slc24a3	ENSMUST00000081121	protein_coding	principal2	2	1	145244972	1788
ENSMUSG00000002870	protein_coding	Mcm2	ENSMUST00000204393	processed_transcript		6	-1	88898701	384
ENSMUSG00000025240	protein_coding	Sacm1l	ENSMUST00000026270	protein_coding	principal1	9	1	123529759	3558
ENSMUSG00000029217	protein_coding	Tec	ENSMUST00000113594	protein_coding	principal1	5	-1	72868459	2580
ENSMUSG00000020173	protein_coding	Cobl	ENSMUST00000172827	protein_coding		11	-1	12369692	625
ENSMUSG00000022792	protein_coding	Yars2	ENSMUST00000159962	protein_coding		16	1	16302965	2805
ENSMUSG00000100265	protein_coding	Gm28363	ENSMUST00000186341	protein_coding	principal1	1	1	117697131	673
ENSMUSG00000002870	protein_coding	Mcm2	ENSMUST00000203935	nonsense_mediated_decay		6	-1	88898688	273
ENSMUSG00000055078	protein_coding	Gabra5	ENSMUST00000206382	protein_coding	principal1	7	-1	57509371	2607
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000122999	protein_coding		7	1	19083868	544
ENSMUSG00000024912	protein_coding	Fosl1	ENSMUST00000236774	protein_coding		19	1	5447705	357
ENSMUSG00000025240	protein_coding	Sacm1l	ENSMUST00000239083	protein_coding		9	1	123529759	3558
ENSMUSG00000074753	antisense	Gm14092	ENSMUST00000136794	antisense		2	-1	145554982	617
ENSMUSG00000002870	protein_coding	Mcm2	ENSMUST00000203172	retained_intron		6	-1	88893727	427
ENSMUSG00000099571	unprocessed_pseudogene	Gm18182	ENSMUST00000191380	unprocessed_pseudogene		1	-1	117751372	1251
ENSMUSG00000020173	protein_coding	Cobl	ENSMUST00000136549	protein_coding		11	-1	12369640	640
ENSMUSG00000094784	protein_coding	Gm8122	ENSMUST00000165988	protein_coding	principal1	14	-1	43235304	1404
ENSMUSG00000022792	protein_coding	Yars2	ENSMUST00000161191	retained_intron		16	1	16302974	1412
ENSMUSG00000055078	protein_coding	Gabra5	ENSMUST00000206734	protein_coding	principal1	7	-1	57510059	2224
ENSMUSG00000024912	protein_coding	Fosl1	ENSMUST00000235958	retained_intron		19	1	5447921	496
ENSMUSG00000100527	unprocessed_pseudogene	Gm28359	ENSMUST00000187470	unprocessed_pseudogene		1	1	117741367	1322
ENSMUSG00000084178	processed_pseudogene	Gm11759	ENSMUST00000121742	processed_pseudogene		2	-1	145510657	464
ENSMUSG00000002870	protein_coding	Mcm2	ENSMUST00000204217	retained_intron		6	-1	88898677	653
ENSMUSG00000116355	processed_pseudogene	Gm5217	ENSMUST00000229873	processed_pseudogene		15	1	71309834	1478
ENSMUSG00000025240	protein_coding	Sacm1l	ENSMUST00000217045	nonsense_mediated_decay		9	1	123529838	374
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000154199	nonsense_mediated_decay		7	1	19083870	2850
ENSMUSG00000087158	sense_intronic	Gm14093	ENSMUST00000145579	sense_intronic		2	1	145337648	364
ENSMUSG00000074277	protein_coding	Phldb3	ENSMUST00000206422	protein_coding	principal1	7	1	24610763	2564
ENSMUSG00000101512	lincRNA	Gm28135	ENSMUST00000186847	lincRNA		Y	1	65831727	1499
ENSMUSG00000020173	protein_coding	Cobl	ENSMUST00000130572	retained_intron		11	-1	12464752	3463
ENSMUSG00000114544	transcribed_unprocessed_pseudogene	Gm49146	ENSMUST00000223745	processed_transcript		14	1	43250590	674
ENSMUSG00000114544	transcribed_unprocessed_pseudogene	Gm49146	ENSMUST00000224139	transcribed_unprocessed_pseudogene		14	1	43250820	234
ENSMUSG00000101512	lincRNA	Gm28135	ENSMUST00000189530	lincRNA		Y	1	65832180	439
ENSMUSG00000114544	transcribed_unprocessed_pseudogene	Gm49146	ENSMUST00000225166	processed_transcript		14	1	43255371	1561
ENSMUSG00000020173	protein_coding	Cobl	ENSMUST00000146067	protein_coding		11	-1	12378278	648
ENSMUSG00000053964	protein_coding	Lgals4	ENSMUST00000066723	protein_coding	principal2	7	1	28833854	1384
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000108473	protein_coding	alternative2	7	1	19083885	2588
ENSMUSG00000063816	processed_pseudogene	Gm4987	ENSMUST00000078326	processed_pseudogene		X	-1	46456294	408
ENSMUSG00000025240	protein_coding	Sacm1l	ENSMUST00000217089	retained_intron		9	1	123586238	687
ENSMUSG00000025240	protein_coding	Sacm1l	ENSMUST00000215004	retained_intron		9	1	123586488	301
ENSMUSG00000074277	protein_coding	Phldb3	ENSMUST00000205857	retained_intron		7	1	24618986	963
ENSMUSG00000114452	lincRNA	A530001N23Rik	ENSMUST00000224431	lincRNA		13	-1	60488727	2915
ENSMUSG00000040423	protein_coding	Rc3h1	ENSMUST00000161609	protein_coding	principal2	1	1	160906418	11006
ENSMUSG00000114452	lincRNA	A530001N23Rik	ENSMUST00000226114	lincRNA		13	-1	60487299	2676
ENSMUSG00000053964	protein_coding	Lgals4	ENSMUST00000125155	retained_intron		7	1	28834156	408
ENSMUSG00000114452	lincRNA	A530001N23Rik	ENSMUST00000225276	lincRNA		13	-1	60488754	2757
ENSMUSG00000090634	protein_coding	Gm8126	ENSMUST00000169587	protein_coding	principal1	14	1	43258649	1764
ENSMUSG00000074277	protein_coding	Phldb3	ENSMUST00000205330	processed_transcript		7	1	24619388	474
ENSMUSG00000114452	lincRNA	A530001N23Rik	ENSMUST00000224134	lincRNA		13	-1	60485967	1584
ENSMUSG00000025240	protein_coding	Sacm1l	ENSMUST00000238984	protein_coding	principal1	9	1	123529882	3433
ENSMUSG00000114452	lincRNA	A530001N23Rik	ENSMUST00000225622	lincRNA		13	-1	60488808	672
ENSMUSG00000074277	protein_coding	Phldb3	ENSMUST00000073325	protein_coding	principal1	7	1	24611328	2273
ENSMUSG00000053964	protein_coding	Lgals4	ENSMUST00000127093	retained_intron		7	1	28834187	793
ENSMUSG00000040423	protein_coding	Rc3h1	ENSMUST00000035911	protein_coding	alternative2	1	1	160930024	3476
ENSMUSG00000081519	processed_pseudogene	Gm13331	ENSMUST00000117500	processed_pseudogene		2	1	23508860	448
ENSMUSG00000053964	protein_coding	Lgals4	ENSMUST00000151547	nonsense_mediated_decay		7	1	28834523	702
ENSMUSG00000022792	protein_coding	Yars2	ENSMUST00000059955	protein_coding	principal1	16	1	16302978	1574
ENSMUSG00000040423	protein_coding	Rc3h1	ENSMUST00000161708	retained_intron		1	1	160950977	663
ENSMUSG00000040154	protein_coding	Wfdc5	ENSMUST00000045127	protein_coding	principal1	2	-1	164182742	2322
ENSMUSG00000103343	TEC	Gm37052	ENSMUST00000194929	TEC		1	1	160910789	1831
ENSMUSG00000030972	protein_coding	Acsm5	ENSMUST00000066465	protein_coding	principal1	7	1	119526208	2981
ENSMUSG00000026728	protein_coding	Vim	ENSMUST00000141365	protein_coding		2	1	13573927	574
ENSMUSG00000041161	protein_coding	Otud3	ENSMUST00000097830	protein_coding	principal1	4	-1	138913945	1668
ENSMUSG00000040154	protein_coding	Wfdc5	ENSMUST00000131974	protein_coding		2	-1	164182598	873
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000108474	protein_coding	alternative2	7	1	19083941	2591
ENSMUSG00000022792	protein_coding	Yars2	ENSMUST00000159683	nonsense_mediated_decay		16	1	16302981	1528
ENSMUSG00000031918	protein_coding	Mtmr2	ENSMUST00000134674	nonsense_mediated_decay		9	1	13749197	3106
ENSMUSG00000025195	protein_coding	Dnmbp	ENSMUST00000212396	protein_coding	principal2	19	-1	43940191	6100
ENSMUSG00000022792	protein_coding	Yars2	ENSMUST00000159583	processed_transcript		16	1	16303553	403
ENSMUSG00000022792	protein_coding	Yars2	ENSMUST00000162734	protein_coding		16	1	16304600	377
ENSMUSG00000053964	protein_coding	Lgals4	ENSMUST00000126603	retained_intron		7	1	28835936	1059
ENSMUSG00000053964	protein_coding	Lgals4	ENSMUST00000137468	retained_intron		7	1	28841006	519
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000238982	protein_coding	alternative2	7	1	19083959	2227
ENSMUSG00000017478	protein_coding	Zc3h18	ENSMUST00000017622	protein_coding	principal4	8	1	122376609	3810
ENSMUSG00000109354	protein_coding	Olfr706	ENSMUST00000214495	processed_transcript		7	-1	106888103	1978
ENSMUSG00000083679	processed_pseudogene	Gm12892	ENSMUST00000117367	processed_pseudogene		4	1	122008193	1146
ENSMUSG00000085649	antisense	A730032A03Rik	ENSMUST00000143202	antisense		2	1	164177584	1928
ENSMUSG00000109354	protein_coding	Olfr706	ENSMUST00000216099	processed_transcript		7	-1	106888162	2388
ENSMUSG00000031918	protein_coding	Mtmr2	ENSMUST00000146901	retained_intron		9	1	13795977	2593
ENSMUSG00000085649	antisense	A730032A03Rik	ENSMUST00000135739	antisense		2	1	164192767	1854
ENSMUSG00000016239	protein_coding	Lonrf3	ENSMUST00000135758	retained_intron		X	1	36328353	2278
ENSMUSG00000109354	protein_coding	Olfr706	ENSMUST00000213918	protein_coding	principal1	7	-1	106888162	4828
ENSMUSG00000031918	protein_coding	Mtmr2	ENSMUST00000152532	protein_coding		9	1	13766043	535
ENSMUSG00000083558	processed_pseudogene	Gm12896	ENSMUST00000118430	processed_pseudogene		4	1	122122847	226
ENSMUSG00000045404	protein_coding	Kcnk13	ENSMUST00000160413	protein_coding	principal1	12	1	99964499	3061
ENSMUSG00000109354	protein_coding	Olfr706	ENSMUST00000216085	processed_transcript		7	-1	106888162	3207
ENSMUSG00000005057	protein_coding	Sh2b2	ENSMUST00000196397	protein_coding	principal1	5	-1	136244854	2797
ENSMUSG00000031918	protein_coding	Mtmr2	ENSMUST00000136735	processed_transcript		9	1	13749185	453
ENSMUSG00000025195	protein_coding	Dnmbp	ENSMUST00000212592	protein_coding		19	-1	43879768	3901
ENSMUSG00000083949	unprocessed_pseudogene	Gm12897	ENSMUST00000120341	unprocessed_pseudogene		4	1	122187748	250
ENSMUSG00000109354	protein_coding	Olfr706	ENSMUST00000209025	protein_coding	principal1	7	-1	106886840	1087
ENSMUSG00000030972	protein_coding	Acsm5	ENSMUST00000207307	nonsense_mediated_decay		7	1	119526243	2703
ENSMUSG00000054258	lincRNA	Gm5082	ENSMUST00000221920	lincRNA		13	1	41649443	1518
ENSMUSG00000025195	protein_coding	Dnmbp	ENSMUST00000212048	protein_coding		19	-1	43890691	4186
ENSMUSG00000045404	protein_coding	Kcnk13	ENSMUST00000162221	processed_transcript		12	1	99964505	834
ENSMUSG00000054258	lincRNA	Gm5082	ENSMUST00000221546	lincRNA		13	1	41650762	1432
ENSMUSG00000031918	protein_coding	Mtmr2	ENSMUST00000156801	protein_coding		9	1	13749319	617
ENSMUSG00000017478	protein_coding	Zc3h18	ENSMUST00000093073	protein_coding	alternative2	8	1	122376643	3705
ENSMUSG00000030972	protein_coding	Acsm5	ENSMUST00000207440	protein_coding	principal1	7	1	119526259	2494
ENSMUSG00000054258	lincRNA	Gm5082	ENSMUST00000067176	lincRNA		13	1	41655697	828
ENSMUSG00000025195	protein_coding	Dnmbp	ENSMUST00000212032	protein_coding	alternative2	19	-1	43912392	5074
ENSMUSG00000005057	protein_coding	Sh2b2	ENSMUST00000005188	protein_coding	principal1	5	-1	136244903	2848
ENSMUSG00000031918	protein_coding	Mtmr2	ENSMUST00000134530	protein_coding		9	1	13749389	442
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000149188	processed_transcript		7	1	19084710	923
ENSMUSG00000025195	protein_coding	Dnmbp	ENSMUST00000212157	processed_transcript		19	-1	43940172	661
ENSMUSG00000029217	protein_coding	Tec	ENSMUST00000126481	nonsense_mediated_decay		5	-1	72868396	2543
ENSMUSG00000005057	protein_coding	Sh2b2	ENSMUST00000197324	retained_intron		5	-1	136222662	2296
ENSMUSG00000031918	protein_coding	Mtmr2	ENSMUST00000143002	processed_transcript		9	1	13766806	612
ENSMUSG00000070661	protein_coding	Rnf186	ENSMUST00000116094	protein_coding	alternative2	4	1	138967112	1249
ENSMUSG00000030972	protein_coding	Acsm5	ENSMUST00000207381	nonsense_mediated_decay		7	1	119526264	1130
ENSMUSG00000017478	protein_coding	Zc3h18	ENSMUST00000176699	protein_coding		8	1	122376644	512
ENSMUSG00000025195	protein_coding	Dnmbp	ENSMUST00000026209	protein_coding	principal2	19	-1	43912392	4882
ENSMUSG00000042845	protein_coding	Wfdc12	ENSMUST00000051272	protein_coding	principal1	2	-1	164190608	775
ENSMUSG00000070661	protein_coding	Rnf186	ENSMUST00000239443	protein_coding	principal2	4	1	138967112	1254
ENSMUSG00000005057	protein_coding	Sh2b2	ENSMUST00000196447	protein_coding		5	-1	136244837	1783
ENSMUSG00000070383	protein_coding	Olfr389	ENSMUST00000215418	protein_coding	principal1	11	-1	73780640	3417
ENSMUSG00000045404	protein_coding	Kcnk13	ENSMUST00000049788	protein_coding	principal1	12	1	99964525	3078
ENSMUSG00000118000	lincRNA	Gm50217	ENSMUST00000235838	lincRNA		19	1	43920473	1963
ENSMUSG00000083244	processed_pseudogene	Gm15180	ENSMUST00000117745	processed_pseudogene		1	1	75568083	492
ENSMUSG00000030972	protein_coding	Acsm5	ENSMUST00000207387	protein_coding		7	1	119526329	1130
ENSMUSG00000039396	protein_coding	Neil3	ENSMUST00000047768	protein_coding	principal1	8	-1	53639065	2253
ENSMUSG00000005057	protein_coding	Sh2b2	ENSMUST00000196245	protein_coding		5	-1	136246556	242
ENSMUSG00000030972	protein_coding	Acsm5	ENSMUST00000207813	protein_coding		7	1	119526341	1084
ENSMUSG00000117275	processed_pseudogene	Gm50047	ENSMUST00000232941	processed_pseudogene		17	-1	71608942	220
ENSMUSG00000040124	protein_coding	Gorab	ENSMUST00000045138	protein_coding	principal1	1	-1	163403669	2538
ENSMUSG00000037579	protein_coding	Kcnh3	ENSMUST00000041415	protein_coding	principal1	15	1	99224861	3698
ENSMUSG00000017478	protein_coding	Zc3h18	ENSMUST00000177386	retained_intron		8	1	122376648	2895
ENSMUSG00000045348	protein_coding	Nyap1	ENSMUST00000118326	protein_coding	principal3	5	-1	137739998	4565
ENSMUSG00000039396	protein_coding	Neil3	ENSMUST00000211404	processed_transcript		8	-1	53591605	327
ENSMUSG00000017478	protein_coding	Zc3h18	ENSMUST00000176629	protein_coding	alternative2	8	1	122376681	3672
ENSMUSG00000029217	protein_coding	Tec	ENSMUST00000155342	nonsense_mediated_decay		5	-1	72786020	2117
ENSMUSG00000069390	protein_coding	Olfr707	ENSMUST00000210644	protein_coding	principal1	7	-1	106899357	1817
ENSMUSG00000045404	protein_coding	Kcnk13	ENSMUST00000177549	protein_coding	principal1	12	1	99964499	3075
ENSMUSG00000040124	protein_coding	Gorab	ENSMUST00000186402	nonsense_mediated_decay		1	-1	163403656	2663
ENSMUSG00000022898	protein_coding	Vps26c	ENSMUST00000023615	protein_coding	principal1	16	-1	94526830	2547
ENSMUSG00000037579	protein_coding	Kcnh3	ENSMUST00000228983	retained_intron		15	1	99227819	572
ENSMUSG00000069390	protein_coding	Olfr707	ENSMUST00000214112	protein_coding	principal1	7	-1	106899357	1735
ENSMUSG00000037579	protein_coding	Kcnh3	ENSMUST00000230973	processed_transcript		15	1	99237905	217
ENSMUSG00000070383	protein_coding	Olfr389	ENSMUST00000122224	protein_coding	principal1	11	-1	73780713	3057
ENSMUSG00000040124	protein_coding	Gorab	ENSMUST00000185299	retained_intron		1	-1	163403611	724
ENSMUSG00000069390	protein_coding	Olfr707	ENSMUST00000213251	protein_coding	principal1	7	-1	106901241	1777
ENSMUSG00000037579	protein_coding	Kcnh3	ENSMUST00000230552	retained_intron		15	1	99238270	3225
ENSMUSG00000101233	lincRNA	Gm29242	ENSMUST00000186570	lincRNA		X	-1	46774099	457
ENSMUSG00000070383	protein_coding	Olfr389	ENSMUST00000124927	protein_coding	principal1	11	-1	73780713	2781
ENSMUSG00000082204	unprocessed_pseudogene	Gm7722	ENSMUST00000120646	unprocessed_pseudogene		X	-1	46536625	741
ENSMUSG00000069390	protein_coding	Olfr707	ENSMUST00000208759	protein_coding	principal1	7	-1	106899414	1242
ENSMUSG00000083867	unprocessed_pseudogene	Gm12893	ENSMUST00000121732	unprocessed_pseudogene		4	1	122234979	275
ENSMUSG00000100599	processed_transcript	1700120C14Rik	ENSMUST00000231167	antisense		15	1	99249511	398
ENSMUSG00000022898	protein_coding	Vps26c	ENSMUST00000232569	retained_intron		16	-1	94504387	326
ENSMUSG00000083365	processed_pseudogene	Gm12895	ENSMUST00000122214	processed_pseudogene		4	1	122455210	226
ENSMUSG00000021057	protein_coding	Akap5	ENSMUST00000095610	protein_coding	alternative2	12	1	76324891	6687
ENSMUSG00000069390	protein_coding	Olfr707	ENSMUST00000088687	protein_coding	principal1	7	-1	106892107	924
ENSMUSG00000100599	processed_transcript	1700120C14Rik	ENSMUST00000187967	antisense		15	1	99251788	391
ENSMUSG00000045348	protein_coding	Nyap1	ENSMUST00000061789	protein_coding	principal3	5	-1	137741607	3912
ENSMUSG00000029217	protein_coding	Tec	ENSMUST00000073843	protein_coding		5	-1	72868446	2573
ENSMUSG00000100599	processed_transcript	1700120C14Rik	ENSMUST00000187706	antisense		15	1	99251836	326
ENSMUSG00000082528	processed_pseudogene	Gm15182	ENSMUST00000120832	processed_pseudogene		1	1	75624654	1676
ENSMUSG00000078680	protein_coding	Mup10	ENSMUST00000098047	protein_coding	principal1	4	-1	60582199	927
ENSMUSG00000062064	protein_coding	Slc2a7	ENSMUST00000059893	protein_coding	principal1	4	1	150148972	1578
ENSMUSG00000081377	unprocessed_pseudogene	Gm12877	ENSMUST00000120383	unprocessed_pseudogene		4	-1	122604894	510
ENSMUSG00000084196	processed_pseudogene	Gm12874	ENSMUST00000117190	processed_pseudogene		4	1	122592984	913
ENSMUSG00000045348	protein_coding	Nyap1	ENSMUST00000212152	protein_coding	alternative2	5	-1	137739718	2499
ENSMUSG00000100599	processed_transcript	1700120C14Rik	ENSMUST00000190683	retained_intron		15	1	99251838	1428
ENSMUSG00000021057	protein_coding	Akap5	ENSMUST00000172992	protein_coding	alternative2	12	1	76324905	2711
ENSMUSG00000017478	protein_coding	Zc3h18	ENSMUST00000177195	processed_transcript		8	1	122403270	492
ENSMUSG00000022898	protein_coding	Vps26c	ENSMUST00000125229	nonsense_mediated_decay		16	-1	94526394	734
ENSMUSG00000116241	processed_pseudogene	Gm49458	ENSMUST00000230386	processed_pseudogene		15	-1	99254835	311
ENSMUSG00000045348	protein_coding	Nyap1	ENSMUST00000149512	protein_coding		5	-1	137741102	2508
ENSMUSG00000062064	protein_coding	Slc2a7	ENSMUST00000133379	retained_intron		4	1	150157828	606
ENSMUSG00000056910	protein_coding	Vmn2r107	ENSMUST00000042090	protein_coding	principal1	17	1	20345242	10110
ENSMUSG00000078680	protein_coding	Mup10	ENSMUST00000148302	retained_intron		4	-1	60581097	797
ENSMUSG00000021057	protein_coding	Akap5	ENSMUST00000154078	protein_coding	principal2	12	1	76324891	6685
ENSMUSG00000017478	protein_coding	Zc3h18	ENSMUST00000175819	processed_transcript		8	1	122403340	518
ENSMUSG00000108479	TEC	2200002A13Rik	ENSMUST00000206633	TEC		7	1	127897568	709
ENSMUSG00000073899	protein_coding	Olfr1532-ps1	ENSMUST00000215949	protein_coding	principal1	7	1	106908001	2439
ENSMUSG00000017478	protein_coding	Zc3h18	ENSMUST00000177123	retained_intron		8	1	122407843	4789
ENSMUSG00000056910	protein_coding	Vmn2r107	ENSMUST00000233836	nonsense_mediated_decay		17	1	20345242	10291
ENSMUSG00000073899	protein_coding	Olfr1532-ps1	ENSMUST00000207492	protein_coding	principal1	7	1	106908001	2414
ENSMUSG00000056910	protein_coding	Vmn2r107	ENSMUST00000233421	nonsense_mediated_decay		17	1	20345242	9941
ENSMUSG00000022898	protein_coding	Vps26c	ENSMUST00000127449	retained_intron		16	-1	94526432	660
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000142725	processed_transcript		7	1	19086500	2135
ENSMUSG00000017478	protein_coding	Zc3h18	ENSMUST00000175798	retained_intron		8	1	122408018	375
ENSMUSG00000022898	protein_coding	Vps26c	ENSMUST00000133944	retained_intron		16	-1	94526441	970
ENSMUSG00000117018	processed_pseudogene	Gm7217	ENSMUST00000233285	processed_pseudogene		17	1	20379063	609
ENSMUSG00000017478	protein_coding	Zc3h18	ENSMUST00000177049	protein_coding		8	1	122411325	837
ENSMUSG00000073899	protein_coding	Olfr1532-ps1	ENSMUST00000098140	protein_coding	principal1	7	1	106914200	924
ENSMUSG00000080732	processed_pseudogene	Gm13222	ENSMUST00000119638	processed_pseudogene		4	1	145579036	138
ENSMUSG00000022898	protein_coding	Vps26c	ENSMUST00000142988	retained_intron		16	-1	94526417	594
ENSMUSG00000110456	TEC	Gm45865	ENSMUST00000211815	TEC		8	1	123767551	945
ENSMUSG00000029217	protein_coding	Tec	ENSMUST00000138842	nonsense_mediated_decay		5	-1	72868483	2569
ENSMUSG00000082012	processed_pseudogene	Gm5257	ENSMUST00000121823	processed_pseudogene		1	1	75636390	790
ENSMUSG00000016239	protein_coding	Lonrf3	ENSMUST00000016383	protein_coding	principal1	X	1	36328353	2911
ENSMUSG00000116589	antisense	Gm31323	ENSMUST00000210205	antisense		16	1	94488777	697
ENSMUSG00000110540	TEC	Gm45743	ENSMUST00000212701	TEC		8	1	122826086	2795
ENSMUSG00000027247	protein_coding	Arhgap1	ENSMUST00000111331	protein_coding		2	1	91650118	2883
ENSMUSG00000093729	unprocessed_pseudogene	Vmn1r-ps141	ENSMUST00000176293	unprocessed_pseudogene		17	1	20405004	753
ENSMUSG00000029217	protein_coding	Tec	ENSMUST00000149533	nonsense_mediated_decay		5	-1	72868449	1561
ENSMUSG00000062553	protein_coding	Olfr709-ps1	ENSMUST00000215468	protein_coding	principal1	7	-1	106932219	5078
ENSMUSG00000015013	protein_coding	Trappc2l	ENSMUST00000212477	processed_transcript		8	1	122611640	426
ENSMUSG00000062553	protein_coding	Olfr709-ps1	ENSMUST00000072368	protein_coding	principal1	7	-1	106927457	924
ENSMUSG00000016239	protein_coding	Lonrf3	ENSMUST00000126147	protein_coding		X	1	36329216	714
ENSMUSG00000029217	protein_coding	Tec	ENSMUST00000150193	retained_intron		5	-1	72868443	621
ENSMUSG00000015013	protein_coding	Trappc2l	ENSMUST00000211904	retained_intron		8	1	122611641	400
ENSMUSG00000029217	protein_coding	Tec	ENSMUST00000202547	protein_coding		5	-1	72844449	377
ENSMUSG00000039396	protein_coding	Neil3	ENSMUST00000149053	processed_transcript		8	-1	53611429	814
ENSMUSG00000035840	protein_coding	Lysmd3	ENSMUST00000224300	protein_coding	principal1	13	1	81657663	4250
ENSMUSG00000099996	lincRNA	Gm29065	ENSMUST00000188786	lincRNA		1	-1	76018756	487
ENSMUSG00000106739	TEC	Gm43499	ENSMUST00000202091	TEC		5	-1	72812074	2107
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000137219	retained_intron		7	1	19086500	2433
ENSMUSG00000091151	protein_coding	Vmn1r224	ENSMUST00000233980	protein_coding	principal2	17	1	20414146	6717
ENSMUSG00000039396	protein_coding	Neil3	ENSMUST00000126157	processed_transcript		8	-1	53611483	783
ENSMUSG00000091151	protein_coding	Vmn1r224	ENSMUST00000233642	protein_coding	principal2	17	1	20414146	6922
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000135839	retained_intron		7	1	19086500	2475
ENSMUSG00000035840	protein_coding	Lysmd3	ENSMUST00000224592	protein_coding		13	1	81657792	370
ENSMUSG00000091151	protein_coding	Vmn1r224	ENSMUST00000233743	protein_coding	alternative2	17	1	20414146	6398
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000147215	processed_transcript		7	1	19087269	743
ENSMUSG00000035840	protein_coding	Lysmd3	ENSMUST00000049055	protein_coding		13	1	81657829	2338
ENSMUSG00000091151	protein_coding	Vmn1r224	ENSMUST00000233318	protein_coding	alternative2	17	1	20414146	6603
ENSMUSG00000045581	protein_coding	Olfr710	ENSMUST00000055923	protein_coding	principal1	7	-1	106948312	1312
ENSMUSG00000039396	protein_coding	Neil3	ENSMUST00000153267	processed_transcript		8	-1	53612564	782
ENSMUSG00000035107	protein_coding	Dcbld2	ENSMUST00000046663	protein_coding	principal1	16	1	58408443	6561
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000152050	processed_transcript		7	1	19087493	565
ENSMUSG00000091151	protein_coding	Vmn1r224	ENSMUST00000233161	protein_coding		17	1	20414146	6188
ENSMUSG00000035840	protein_coding	Lysmd3	ENSMUST00000224420	protein_coding		13	1	81665194	600
ENSMUSG00000091151	protein_coding	Vmn1r224	ENSMUST00000233891	protein_coding		17	1	20414146	6185
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000128422	processed_transcript		7	1	19087611	650
ENSMUSG00000039396	protein_coding	Neil3	ENSMUST00000130656	retained_intron		8	-1	53638966	3085
ENSMUSG00000091151	protein_coding	Vmn1r224	ENSMUST00000233600	protein_coding		17	1	20414146	5983
ENSMUSG00000091151	protein_coding	Vmn1r224	ENSMUST00000233863	protein_coding		17	1	20414146	5980
ENSMUSG00000101763	processed_pseudogene	Gm29068	ENSMUST00000191607	processed_pseudogene		1	-1	76110580	400
ENSMUSG00000080871	unprocessed_pseudogene	Gm12875	ENSMUST00000118745	unprocessed_pseudogene		4	-1	122648326	344
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000148472	retained_intron		7	1	19087746	967
ENSMUSG00000039396	protein_coding	Neil3	ENSMUST00000135443	protein_coding		8	-1	53638678	373
ENSMUSG00000091151	protein_coding	Vmn1r224	ENSMUST00000170076	protein_coding	principal2	17	1	20419163	897
ENSMUSG00000108933	processed_pseudogene	Gm44582	ENSMUST00000209125	processed_pseudogene		7	1	106952228	445
ENSMUSG00000083109	unprocessed_pseudogene	Gm12876	ENSMUST00000120975	unprocessed_pseudogene		4	-1	122677278	408
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000132115	processed_transcript		7	1	19088185	757
ENSMUSG00000115459	TEC	Gm49280	ENSMUST00000226719	TEC		15	1	28855004	2769
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000143938	retained_intron		7	1	19091483	785
ENSMUSG00000025243	protein_coding	Slc6a20b	ENSMUST00000026273	protein_coding	principal1	9	-1	123632565	6307
ENSMUSG00000021149	protein_coding	Gtpbp4	ENSMUST00000222098	protein_coding	principal1	13	-1	8996083	8783
ENSMUSG00000015013	protein_coding	Trappc2l	ENSMUST00000015157	protein_coding	principal1	8	1	122611646	1659
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000148380	processed_transcript		7	1	19091616	663
ENSMUSG00000100827	lincRNA	Gm29069	ENSMUST00000185857	lincRNA		1	1	76420692	675
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000126264	processed_transcript		7	1	19092218	851
ENSMUSG00000097987	processed_pseudogene	Gm17786	ENSMUST00000182000	processed_pseudogene		8	1	121581765	427
ENSMUSG00000025243	protein_coding	Slc6a20b	ENSMUST00000166800	nonsense_mediated_decay		9	-1	123632399	5163
ENSMUSG00000030409	protein_coding	Dmpk	ENSMUST00000140742	retained_intron		7	1	19092296	592
ENSMUSG00000001053	protein_coding	N4bp3	ENSMUST00000001080	protein_coding	principal1	11	-1	51650842	2367
ENSMUSG00000031960	protein_coding	Aars	ENSMUST00000034441	protein_coding	principal1	8	1	111033902	5750
ENSMUSG00000027247	protein_coding	Arhgap1	ENSMUST00000111329	protein_coding	principal1	2	1	91649860	3201
ENSMUSG00000100553	lincRNA	Gm17751	ENSMUST00000190362	lincRNA		1	1	76489133	1604
ENSMUSG00000118062	unprocessed_pseudogene	Gm50435	ENSMUST00000236996	unprocessed_pseudogene		19	-1	6575362	489
ENSMUSG00000024165	protein_coding	Jpt2	ENSMUST00000233067	nonsense_mediated_decay		17	-1	24960669	1430
ENSMUSG00000100553	lincRNA	Gm17751	ENSMUST00000189132	lincRNA		1	1	76489133	2004
ENSMUSG00000031960	protein_coding	Aars	ENSMUST00000142770	retained_intron		8	1	111033916	4187
ENSMUSG00000078502	protein_coding	Gm13212	ENSMUST00000105739	protein_coding	principal1	4	1	145585166	3595
ENSMUSG00000031960	protein_coding	Aars	ENSMUST00000145059	retained_intron		8	1	111041726	807
ENSMUSG00000041881	protein_coding	Ndufa7	ENSMUST00000048249	protein_coding	principal1	17	1	33824572	528
ENSMUSG00000058385	protein_coding	H2bc8	ENSMUST00000079251	protein_coding	principal1	13	1	23571396	618
ENSMUSG00000027247	protein_coding	Arhgap1	ENSMUST00000090614	protein_coding	principal1	2	1	91650222	2866
ENSMUSG00000001053	protein_coding	N4bp3	ENSMUST00000156835	protein_coding		11	-1	51650837	846
ENSMUSG00000031960	protein_coding	Aars	ENSMUST00000124285	retained_intron		8	1	111043079	659
ENSMUSG00000027247	protein_coding	Arhgap1	ENSMUST00000139314	processed_transcript		2	1	91651498	584
ENSMUSG00000031960	protein_coding	Aars	ENSMUST00000128320	retained_intron		8	1	111047912	426
ENSMUSG00000078502	protein_coding	Gm13212	ENSMUST00000119718	protein_coding		4	1	145585203	2498
ENSMUSG00000001053	protein_coding	N4bp3	ENSMUST00000142721	protein_coding		11	-1	51650820	713
ENSMUSG00000020524	protein_coding	Gria1	ENSMUST00000036315	protein_coding	alternative2	11	1	57011810	5546
ENSMUSG00000078502	protein_coding	Gm13212	ENSMUST00000097794	protein_coding		4	1	145617146	1221
ENSMUSG00000094676	processed_pseudogene	Gm10105	ENSMUST00000184601	processed_pseudogene		9	-1	35589350	270
ENSMUSG00000035107	protein_coding	Dcbld2	ENSMUST00000142830	processed_transcript		16	1	58455191	627
ENSMUSG00000053930	protein_coding	Shisa6	ENSMUST00000134562	processed_transcript		11	-1	66502814	285
ENSMUSG00000027247	protein_coding	Arhgap1	ENSMUST00000141012	processed_transcript		2	1	91651747	558
ENSMUSG00000035107	protein_coding	Dcbld2	ENSMUST00000149321	processed_transcript		16	1	58455846	576
ENSMUSG00000023263	protein_coding	9530002B09Rik	ENSMUST00000024032	protein_coding	principal1	4	1	122689275	803
ENSMUSG00000021149	protein_coding	Gtpbp4	ENSMUST00000021574	nonsense_mediated_decay		13	-1	8996050	2442
ENSMUSG00000027247	protein_coding	Arhgap1	ENSMUST00000154468	processed_transcript		2	1	91651498	450
ENSMUSG00000035107	protein_coding	Dcbld2	ENSMUST00000134324	retained_intron		16	1	58456377	891
ENSMUSG00000024165	protein_coding	Jpt2	ENSMUST00000024981	protein_coding	principal1	17	-1	24960689	2672
ENSMUSG00000052563	protein_coding	D930048N14Rik	ENSMUST00000117859	protein_coding	alternative2	11	1	51650954	3410
ENSMUSG00000021149	protein_coding	Gtpbp4	ENSMUST00000222975	retained_intron		13	-1	8977344	503
ENSMUSG00000026771	protein_coding	Spopl	ENSMUST00000132484	protein_coding	principal1	2	-1	23572104	6595
ENSMUSG00000084082	unprocessed_pseudogene	Gm12872	ENSMUST00000121835	unprocessed_pseudogene		4	-1	122734733	320
ENSMUSG00000020918	protein_coding	Kat2a	ENSMUST00000153526	processed_transcript		11	-1	100712173	2946
ENSMUSG00000021149	protein_coding	Gtpbp4	ENSMUST00000221534	retained_intron		13	-1	8985703	620
ENSMUSG00000083494	unprocessed_pseudogene	Gm12873	ENSMUST00000119988	unprocessed_pseudogene		4	-1	122793749	422
ENSMUSG00000024165	protein_coding	Jpt2	ENSMUST00000232978	processed_transcript		17	-1	24960637	501
ENSMUSG00000027247	protein_coding	Arhgap1	ENSMUST00000123702	processed_transcript		2	1	91668516	1479
ENSMUSG00000043687	protein_coding	1190005I06Rik	ENSMUST00000123927	protein_coding		8	-1	120634492	844
ENSMUSG00000052563	protein_coding	D930048N14Rik	ENSMUST00000064493	protein_coding	principal5	11	1	51650956	3426
ENSMUSG00000082868	unprocessed_pseudogene	Mup-ps5	ENSMUST00000118667	unprocessed_pseudogene		4	1	60597597	99
ENSMUSG00000053930	protein_coding	Shisa6	ENSMUST00000123454	protein_coding		11	-1	66525795	7252
ENSMUSG00000027247	protein_coding	Arhgap1	ENSMUST00000149426	processed_transcript		2	1	91669931	784
ENSMUSG00000053930	protein_coding	Shisa6	ENSMUST00000066679	protein_coding	principal1	11	-1	66525964	1578
ENSMUSG00000020918	protein_coding	Kat2a	ENSMUST00000126299	processed_transcript		11	-1	100712449	3269
ENSMUSG00000021149	protein_coding	Gtpbp4	ENSMUST00000220546	processed_transcript		13	-1	8989113	642
ENSMUSG00000035107	protein_coding	Dcbld2	ENSMUST00000150817	processed_transcript		16	1	58460199	1270
ENSMUSG00000043687	protein_coding	1190005I06Rik	ENSMUST00000180677	protein_coding	principal1	8	-1	120647632	533
ENSMUSG00000020524	protein_coding	Gria1	ENSMUST00000094179	protein_coding	principal3	11	1	57011956	5399
ENSMUSG00000024165	protein_coding	Jpt2	ENSMUST00000233316	retained_intron		17	-1	24960636	1705
ENSMUSG00000041881	protein_coding	Ndufa7	ENSMUST00000173182	retained_intron		17	1	33824594	610
ENSMUSG00000021504	protein_coding	B4galt7	ENSMUST00000100764	protein_coding		13	1	55599896	2195
ENSMUSG00000035107	protein_coding	Dcbld2	ENSMUST00000130409	retained_intron		16	1	58460243	2396
ENSMUSG00000027247	protein_coding	Arhgap1	ENSMUST00000111330	protein_coding	principal1	2	1	91653208	3068
ENSMUSG00000084967	processed_transcript	Gm12296	ENSMUST00000144922	processed_transcript		11	1	66168035	3220
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000087374	protein_coding	principal2	1	1	63445895	6426
ENSMUSG00000043687	protein_coding	1190005I06Rik	ENSMUST00000144417	nonsense_mediated_decay		8	-1	120634363	508
ENSMUSG00000035107	protein_coding	Dcbld2	ENSMUST00000135415	retained_intron		16	1	58460245	2359
ENSMUSG00000024165	protein_coding	Jpt2	ENSMUST00000233481	processed_transcript		17	-1	24960645	445
ENSMUSG00000020524	protein_coding	Gria1	ENSMUST00000151045	protein_coding	alternative2	11	1	57013046	5361
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000114101	retained_intron		1	1	63445910	3496
ENSMUSG00000021504	protein_coding	B4galt7	ENSMUST00000142654	retained_intron		13	1	55600065	1213
ENSMUSG00000050555	protein_coding	Hyls1	ENSMUST00000115110	protein_coding	principal1	9	-1	35570398	1973
ENSMUSG00000020524	protein_coding	Gria1	ENSMUST00000173531	processed_transcript		11	1	57176518	531
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000146403	retained_intron		1	1	63445935	3538
ENSMUSG00000069818	protein_coding	Olfr390	ENSMUST00000120081	protein_coding	principal1	11	1	73782964	3604
ENSMUSG00000041881	protein_coding	Ndufa7	ENSMUST00000173132	nonsense_mediated_decay		17	1	33824604	438
ENSMUSG00000069818	protein_coding	Olfr390	ENSMUST00000215161	protein_coding	principal1	11	1	73782966	3740
ENSMUSG00000106394	processed_pseudogene	Gm42698	ENSMUST00000197790	processed_pseudogene		5	-1	44356754	762
ENSMUSG00000050555	protein_coding	Hyls1	ENSMUST00000132547	retained_intron		9	-1	35570097	4269
ENSMUSG00000026771	protein_coding	Spopl	ENSMUST00000028110	nonsense_mediated_decay		2	-1	23572078	2078
ENSMUSG00000104541	TEC	Gm43114	ENSMUST00000198298	TEC		5	1	44355705	343
ENSMUSG00000069818	protein_coding	Olfr390	ENSMUST00000206815	protein_coding		11	1	73782984	632
ENSMUSG00000026771	protein_coding	Spopl	ENSMUST00000132827	nonsense_mediated_decay		2	-1	23571978	1516
ENSMUSG00000041881	protein_coding	Ndufa7	ENSMUST00000234470	processed_transcript		17	1	33824613	366
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000114103	protein_coding	alternative2	1	1	63446211	2655
ENSMUSG00000069818	protein_coding	Olfr390	ENSMUST00000092919	protein_coding	principal1	11	1	73786940	936
ENSMUSG00000053522	protein_coding	Lgals7	ENSMUST00000138272	protein_coding		7	1	28863853	413
ENSMUSG00000113967	lincRNA	Gm31025	ENSMUST00000222553	lincRNA		12	1	27995008	482
ENSMUSG00000104923	processed_pseudogene	Gm5865	ENSMUST00000198713	processed_pseudogene		5	-1	44406593	637
ENSMUSG00000026771	protein_coding	Spopl	ENSMUST00000195415	retained_intron		2	-1	23515223	3690
ENSMUSG00000041881	protein_coding	Ndufa7	ENSMUST00000174498	retained_intron		17	1	33824645	419
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000102787	protein_coding	principal1	2	-1	38287375	4342
ENSMUSG00000021504	protein_coding	B4galt7	ENSMUST00000133176	protein_coding		13	1	55600065	806
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000114107	protein_coding	alternative2	1	1	63446211	6110
ENSMUSG00000026771	protein_coding	Spopl	ENSMUST00000136290	retained_intron		2	-1	23537500	245
ENSMUSG00000113640	protein_coding	Adat3	ENSMUST00000038411	protein_coding	principal1	10	1	80602880	1411
ENSMUSG00000104800	lincRNA	Gm36017	ENSMUST00000199005	lincRNA		5	-1	44427592	923
ENSMUSG00000094995	protein_coding	Pate3	ENSMUST00000178236	protein_coding	principal1	9	-1	35648202	1329
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000190658	processed_transcript		1	1	63470619	740
ENSMUSG00000026771	protein_coding	Spopl	ENSMUST00000123843	nonsense_mediated_decay		2	-1	23572106	685
ENSMUSG00000025243	protein_coding	Slc6a20b	ENSMUST00000171122	processed_transcript		9	-1	123628562	2017
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000097717	processed_transcript		1	1	63494169	5730
ENSMUSG00000021504	protein_coding	B4galt7	ENSMUST00000064701	protein_coding	principal1	13	1	55600065	2130
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000185616	retained_intron		1	1	63536967	3507
ENSMUSG00000041881	protein_coding	Ndufa7	ENSMUST00000173807	processed_transcript		17	1	33825045	371
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000136460	protein_coding		2	-1	37852440	833
ENSMUSG00000113640	protein_coding	Adat3	ENSMUST00000221960	protein_coding		10	1	80602896	795
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000134704	retained_intron		1	1	63555174	648
ENSMUSG00000041881	protein_coding	Ndufa7	ENSMUST00000173175	processed_transcript		17	1	33825621	368
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000187844	retained_intron		1	1	63578792	3388
ENSMUSG00000112888	processed_transcript	Gm47634	ENSMUST00000219081	processed_transcript		10	1	22751897	1271
ENSMUSG00000113640	protein_coding	Adat3	ENSMUST00000221670	protein_coding		10	1	80603252	359
ENSMUSG00000025243	protein_coding	Slc6a20b	ENSMUST00000168824	nonsense_mediated_decay		9	-1	123632327	2166
ENSMUSG00000025964	protein_coding	Adam23	ENSMUST00000141545	retained_intron		1	1	63585023	631
ENSMUSG00000041881	protein_coding	Ndufa7	ENSMUST00000174847	processed_transcript		17	1	33829124	549
ENSMUSG00000086506	antisense	Gm15911	ENSMUST00000138992	antisense		13	-1	55604783	809
ENSMUSG00000025243	protein_coding	Slc6a20b	ENSMUST00000163397	nonsense_mediated_decay		9	-1	123632283	716
ENSMUSG00000041881	protein_coding	Ndufa7	ENSMUST00000173556	processed_transcript		17	1	33829359	383
ENSMUSG00000112096	TEC	A430103D13Rik	ENSMUST00000220077	TEC		12	-1	76345381	857
ENSMUSG00000025243	protein_coding	Slc6a20b	ENSMUST00000164241	processed_transcript		9	-1	123632501	485
ENSMUSG00000084969	lincRNA	Gm11205	ENSMUST00000137738	lincRNA		11	1	79704630	431
ENSMUSG00000039540	protein_coding	4921524L21Rik	ENSMUST00000234821	protein_coding		18	1	6603629	491
ENSMUSG00000108896	processed_pseudogene	Gm20136	ENSMUST00000207501	processed_pseudogene		18	-1	32500432	891
ENSMUSG00000041881	protein_coding	Ndufa7	ENSMUST00000173946	retained_intron		17	1	33829393	640
ENSMUSG00000053522	protein_coding	Lgals7	ENSMUST00000081457	protein_coding	principal1	7	1	28864229	754
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000140552	nonsense_mediated_decay		2	-1	38287390	1794
ENSMUSG00000109232	bidirectional_promoter_lncRNA	Gm44577	ENSMUST00000207413	bidirectional_promoter_lncRNA		18	1	32462579	1284
ENSMUSG00000039178	protein_coding	Tbc1d19	ENSMUST00000202528	nonsense_mediated_decay		5	1	53809606	873
ENSMUSG00000086474	lincRNA	9130204K15Rik	ENSMUST00000150312	lincRNA		11	-1	79782887	696
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000150896	nonsense_mediated_decay		2	-1	38287377	1036
ENSMUSG00000053522	protein_coding	Lgals7	ENSMUST00000128001	processed_transcript		7	1	28864455	190
ENSMUSG00000109238	protein_coding	Gm35060	ENSMUST00000207669	protein_coding	principal1	18	-1	32462472	825
ENSMUSG00000115483	protein_coding	Gm9732	ENSMUST00000228840	processed_transcript		14	1	43275036	1188
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000130472	protein_coding		2	-1	38287188	374
ENSMUSG00000086474	lincRNA	9130204K15Rik	ENSMUST00000131441	lincRNA		11	-1	79872394	867
ENSMUSG00000108930	antisense	Gm10648	ENSMUST00000207552	antisense		7	-1	28876331	2902
ENSMUSG00000086474	lincRNA	9130204K15Rik	ENSMUST00000159495	lincRNA		11	-1	79860716	181
ENSMUSG00000115483	protein_coding	Gm9732	ENSMUST00000228505	processed_transcript		14	1	43275218	1591
ENSMUSG00000086474	lincRNA	9130204K15Rik	ENSMUST00000162268	lincRNA		11	-1	79805172	376
ENSMUSG00000109238	protein_coding	Gm35060	ENSMUST00000207671	processed_transcript		18	-1	32472589	701
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000126889	retained_intron		2	-1	38166081	652
ENSMUSG00000083395	processed_pseudogene	Gm11203	ENSMUST00000122169	processed_pseudogene		11	1	79897222	741
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000143095	nonsense_mediated_decay		2	-1	38287358	625
ENSMUSG00000115483	protein_coding	Gm9732	ENSMUST00000228117	protein_coding	principal1	14	1	43298872	1466
ENSMUSG00000082252	processed_pseudogene	Gm11204	ENSMUST00000122438	processed_pseudogene		11	1	79905981	147
ENSMUSG00000091815	unprocessed_pseudogene	Gm17153	ENSMUST00000171314	unprocessed_pseudogene		14	-1	43279645	490
ENSMUSG00000022350	protein_coding	Washc5	ENSMUST00000227725	protein_coding		15	-1	59352529	2618
ENSMUSG00000112727	processed_pseudogene	Gm17794	ENSMUST00000220252	processed_pseudogene		10	1	22791319	955
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000142813	nonsense_mediated_decay		2	-1	38287218	408
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000136116	retained_intron		2	-1	38243470	668
ENSMUSG00000087166	protein_coding	L1td1	ENSMUST00000152889	protein_coding		4	1	98726734	705
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000205218	retained_intron		2	-1	38167819	4082
ENSMUSG00000090713	protein_coding	Gm8127	ENSMUST00000163655	protein_coding	principal1	14	-1	43293832	1427
ENSMUSG00000042363	protein_coding	Lgalsl	ENSMUST00000047028	protein_coding	principal1	11	-1	20831056	3362
ENSMUSG00000074452	protein_coding	Pate2	ENSMUST00000098906	protein_coding	alternative2	9	1	35570284	1690
ENSMUSG00000035392	protein_coding	Dennd1a	ENSMUST00000128492	retained_intron		2	-1	38287214	6212
ENSMUSG00000074452	protein_coding	Pate2	ENSMUST00000137309	processed_transcript		9	1	35573873	826
ENSMUSG00000105082	unprocessed_pseudogene	Aqp10-ps	ENSMUST00000199555	unprocessed_pseudogene		3	-1	89968658	835
ENSMUSG00000007777	protein_coding	0610009B22Rik	ENSMUST00000007921	protein_coding	principal1	11	-1	51688653	813
ENSMUSG00000041453	protein_coding	Rpl21	ENSMUST00000035983	protein_coding	principal1	5	1	146832890	1856
ENSMUSG00000031812	protein_coding	Map1lc3b	ENSMUST00000034270	protein_coding	principal1	8	1	121590361	2532
ENSMUSG00000091832	unprocessed_pseudogene	Gm17155	ENSMUST00000165969	unprocessed_pseudogene		14	-1	43320397	473
ENSMUSG00000039540	protein_coding	4921524L21Rik	ENSMUST00000044829	protein_coding	principal2	18	1	6603629	1484
ENSMUSG00000046589	protein_coding	Lrrc8e	ENSMUST00000053035	protein_coding	principal1	8	1	4226827	3878
ENSMUSG00000031812	protein_coding	Map1lc3b	ENSMUST00000181826	protein_coding		8	1	121590477	2633
ENSMUSG00000007777	protein_coding	0610009B22Rik	ENSMUST00000109098	protein_coding	principal1	11	-1	51688874	892
ENSMUSG00000039540	protein_coding	4921524L21Rik	ENSMUST00000234337	protein_coding	alternative2	18	1	6603629	1329
ENSMUSG00000041453	protein_coding	Rpl21	ENSMUST00000154768	retained_intron		5	1	146833146	448
ENSMUSG00000042363	protein_coding	Lgalsl	ENSMUST00000154300	processed_transcript		11	-1	20831056	483
ENSMUSG00000020889	protein_coding	Nr1d1	ENSMUST00000064941	protein_coding	principal1	11	-1	98775333	2721
ENSMUSG00000074452	protein_coding	Pate2	ENSMUST00000118254	protein_coding	principal2	9	1	35669639	2215
ENSMUSG00000087166	protein_coding	L1td1	ENSMUST00000154279	protein_coding	principal2	4	1	98726748	2942
ENSMUSG00000046589	protein_coding	Lrrc8e	ENSMUST00000207770	protein_coding		8	1	4231207	455
ENSMUSG00000041453	protein_coding	Rpl21	ENSMUST00000075453	protein_coding	principal1	5	1	146833195	899
ENSMUSG00000026728	protein_coding	Vim	ENSMUST00000028062	protein_coding	principal2	2	1	13573952	2193
ENSMUSG00000042363	protein_coding	Lgalsl	ENSMUST00000144441	processed_transcript		11	-1	20830755	913
ENSMUSG00000020889	protein_coding	Nr1d1	ENSMUST00000139220	processed_transcript		11	-1	98770426	781
ENSMUSG00000087166	protein_coding	L1td1	ENSMUST00000171708	protein_coding		4	1	98726793	466
ENSMUSG00000074452	protein_coding	Pate2	ENSMUST00000173488	retained_intron		9	1	35669651	1449
ENSMUSG00000042363	protein_coding	Lgalsl	ENSMUST00000132928	processed_transcript		11	-1	20831022	451
ENSMUSG00000026728	protein_coding	Vim	ENSMUST00000193675	protein_coding	alternative2	2	1	13574281	1777
ENSMUSG00000031812	protein_coding	Map1lc3b	ENSMUST00000180548	retained_intron		8	1	121590481	4138
ENSMUSG00000096777	lincRNA	Gm21723	ENSMUST00000189444	lincRNA		Y	1	32159839	174
ENSMUSG00000096777	lincRNA	Gm21723	ENSMUST00000178692	lincRNA		Y	1	32159845	498
ENSMUSG00000074452	protein_coding	Pate2	ENSMUST00000217565	protein_coding		9	1	35669699	326
ENSMUSG00000041453	protein_coding	Rpl21	ENSMUST00000099272	protein_coding	principal1	5	1	146833202	1067
ENSMUSG00000026728	protein_coding	Vim	ENSMUST00000155605	retained_intron		2	1	13574322	926
ENSMUSG00000031812	protein_coding	Map1lc3b	ENSMUST00000181948	protein_coding		8	1	121590484	766
ENSMUSG00000058756	protein_coding	Thra	ENSMUST00000142944	processed_transcript		11	1	98740638	378
ENSMUSG00000026728	protein_coding	Vim	ENSMUST00000191615	retained_intron		2	1	13574523	2926
ENSMUSG00000087166	protein_coding	L1td1	ENSMUST00000173659	protein_coding	alternative2	4	1	98733203	2547
ENSMUSG00000113235	lincRNA	Gm47872	ENSMUST00000222662	lincRNA		12	-1	28339376	545
ENSMUSG00000041453	protein_coding	Rpl21	ENSMUST00000151871	retained_intron		5	1	146834184	596
ENSMUSG00000113235	lincRNA	Gm47872	ENSMUST00000221785	lincRNA		12	-1	28299646	384
ENSMUSG00000112819	lincRNA	Gm46332	ENSMUST00000217932	lincRNA		12	-1	4553785	457
ENSMUSG00000058756	protein_coding	Thra	ENSMUST00000153468	processed_transcript		11	1	98740801	379
ENSMUSG00000113235	lincRNA	Gm47872	ENSMUST00000220722	lincRNA		12	-1	28339409	332
ENSMUSG00000091481	unprocessed_pseudogene	Gm17154	ENSMUST00000165748	unprocessed_pseudogene		14	-1	43334975	431
ENSMUSG00000031812	protein_coding	Map1lc3b	ENSMUST00000181521	protein_coding		8	1	121590712	775
ENSMUSG00000026728	protein_coding	Vim	ENSMUST00000148248	retained_intron		2	1	13579369	535
ENSMUSG00000090523	protein_coding	Gypc	ENSMUST00000174459	protein_coding	principal3	18	-1	32560034	2180
ENSMUSG00000113939	lincRNA	Gm47871	ENSMUST00000222289	lincRNA		12	-1	28321058	424
ENSMUSG00000058756	protein_coding	Thra	ENSMUST00000124130	processed_transcript		11	1	98740904	359
ENSMUSG00000112819	lincRNA	Gm46332	ENSMUST00000220320	lincRNA		12	-1	4569538	516
ENSMUSG00000091215	protein_coding	Pate1	ENSMUST00000170021	protein_coding	principal1	9	-1	35687371	389
ENSMUSG00000081578	processed_pseudogene	Gm12611	ENSMUST00000119452	processed_pseudogene		11	1	60816375	1037
ENSMUSG00000041453	protein_coding	Rpl21	ENSMUST00000135345	retained_intron		5	1	146835206	632
ENSMUSG00000106551	processed_pseudogene	Gm1969	ENSMUST00000198125	processed_pseudogene		5	-1	29833307	1220
ENSMUSG00000098221	lincRNA	Gm27030	ENSMUST00000182551	lincRNA		8	1	121654054	464
ENSMUSG00000100136	unprocessed_pseudogene	Gm20933	ENSMUST00000187070	unprocessed_pseudogene		Y	-1	65939962	693
ENSMUSG00000105437	lincRNA	Gm42450	ENSMUST00000199286	lincRNA		5	-1	29891964	2644
ENSMUSG00000090523	protein_coding	Gypc	ENSMUST00000174000	protein_coding	alternative2	18	-1	32559980	2072
ENSMUSG00000091215	protein_coding	Pate1	ENSMUST00000183567	retained_intron		9	-1	35687390	1675
ENSMUSG00000058756	protein_coding	Thra	ENSMUST00000152195	processed_transcript		11	1	98741811	1386
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000234560	nonsense_mediated_decay		17	1	71615895	2410
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000224560	nonsense_mediated_decay		19	-1	37915750	863
ENSMUSG00000105926	TEC	Gm43386	ENSMUST00000199654	TEC		5	-1	29950718	4001
ENSMUSG00000022350	protein_coding	Washc5	ENSMUST00000022976	protein_coding	principal1	15	-1	59374167	4033
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000160934	nonsense_mediated_decay		3	1	28263214	7108
ENSMUSG00000090523	protein_coding	Gypc	ENSMUST00000172434	protein_coding	alternative2	18	-1	32535418	612
ENSMUSG00000086749	lincRNA	Gm12037	ENSMUST00000123160	lincRNA		11	-1	20831919	308
ENSMUSG00000082157	processed_pseudogene	Gm12038	ENSMUST00000117322	processed_pseudogene		11	-1	20847682	207
ENSMUSG00000029683	protein_coding	Lmod2	ENSMUST00000031694	protein_coding	principal1	6	1	24597762	1976
ENSMUSG00000112397	antisense	Gm10824	ENSMUST00000220000	antisense		10	1	22815749	2198
ENSMUSG00000049225	protein_coding	Pdp1	ENSMUST00000108297	protein_coding	principal3	4	-1	11966452	4201
ENSMUSG00000094793	protein_coding	Mup12	ENSMUST00000117932	protein_coding	principal1	4	-1	60741326	926
ENSMUSG00000105439	lincRNA	A230098N10Rik	ENSMUST00000200055	lincRNA		5	-1	30008798	356
ENSMUSG00000101256	lincRNA	Gm28133	ENSMUST00000191344	lincRNA		Y	-1	66081905	1158
ENSMUSG00000105439	lincRNA	A230098N10Rik	ENSMUST00000199600	lincRNA		5	-1	30007761	200
ENSMUSG00000101256	lincRNA	Gm28133	ENSMUST00000189123	lincRNA		Y	-1	66081796	438
ENSMUSG00000094743	unprocessed_pseudogene	Mup-ps7	ENSMUST00000178292	unprocessed_pseudogene		4	1	60677683	545
ENSMUSG00000032099	protein_coding	Pate4	ENSMUST00000034610	protein_coding	principal1	9	-1	35611941	1072
ENSMUSG00000101758	lincRNA	Gm28137	ENSMUST00000191478	lincRNA		Y	1	66079219	416
ENSMUSG00000086984	processed_pseudogene	Gm6762	ENSMUST00000121769	processed_pseudogene		9	-1	35574400	289
ENSMUSG00000099395	lincRNA	Gm28138	ENSMUST00000186250	lincRNA		Y	1	66114135	2167
ENSMUSG00000045680	protein_coding	Tcf21	ENSMUST00000049930	protein_coding	principal1	10	-1	22820174	1267
ENSMUSG00000045680	protein_coding	Tcf21	ENSMUST00000218002	protein_coding		10	-1	22820159	1788
ENSMUSG00000100982	unprocessed_pseudogene	Gm21837	ENSMUST00000188117	unprocessed_pseudogene		Y	1	66123576	696
ENSMUSG00000032103	protein_coding	Pus3	ENSMUST00000135768	retained_intron		9	1	35558595	2144
ENSMUSG00000113116	processed_pseudogene	Gm47878	ENSMUST00000223390	processed_pseudogene		12	1	28523050	307
ENSMUSG00000113949	protein_coding	Scamp4	ENSMUST00000220669	nonsense_mediated_decay		10	1	80602872	639
ENSMUSG00000029195	protein_coding	Klb	ENSMUST00000031096	protein_coding	principal1	5	1	65348314	3540
ENSMUSG00000078139	protein_coding	AK157302	ENSMUST00000104942	protein_coding	principal1	13	1	21495223	1924
ENSMUSG00000029195	protein_coding	Klb	ENSMUST00000203333	retained_intron		5	1	65348407	1839
ENSMUSG00000029195	protein_coding	Klb	ENSMUST00000205084	nonsense_mediated_decay		5	1	65348408	1954
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000047086	protein_coding	principal1	17	1	71616215	3450
ENSMUSG00000031970	protein_coding	Dbndd1	ENSMUST00000176286	protein_coding		8	-1	123515455	1344
ENSMUSG00000049225	protein_coding	Pdp1	ENSMUST00000108301	protein_coding		4	-1	11965821	2635
ENSMUSG00000083016	processed_pseudogene	Gm12618	ENSMUST00000121754	processed_pseudogene		11	-1	60819278	483
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000234947	retained_intron		17	1	71636555	528
ENSMUSG00000039178	protein_coding	Tbc1d19	ENSMUST00000037337	protein_coding	principal1	5	1	53809627	2273
ENSMUSG00000020633	protein_coding	Dcdc2c	ENSMUST00000189735	protein_coding		12	-1	28548337	1434
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000234933	nonsense_mediated_decay		17	1	71640246	722
ENSMUSG00000020633	protein_coding	Dcdc2c	ENSMUST00000185916	protein_coding		12	-1	28552100	2205
ENSMUSG00000020633	protein_coding	Dcdc2c	ENSMUST00000221349	protein_coding	principal1	12	-1	28552399	2209
ENSMUSG00000024379	protein_coding	Tslp	ENSMUST00000025237	protein_coding	principal1	18	1	32815383	1126
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000112568	protein_coding	alternative2	2	1	59612042	7422
ENSMUSG00000049225	protein_coding	Pdp1	ENSMUST00000095144	protein_coding	alternative1	4	-1	11965927	2506
ENSMUSG00000020633	protein_coding	Dcdc2c	ENSMUST00000186301	processed_transcript		12	-1	28516714	229
ENSMUSG00000039178	protein_coding	Tbc1d19	ENSMUST00000201727	processed_transcript		5	1	53809648	468
ENSMUSG00000035403	protein_coding	Crb2	ENSMUST00000050372	protein_coding	principal1	2	1	37776249	6372
ENSMUSG00000020633	protein_coding	Dcdc2c	ENSMUST00000189747	processed_transcript		12	-1	28524749	263
ENSMUSG00000049225	protein_coding	Pdp1	ENSMUST00000108302	protein_coding		4	-1	11965981	2525
ENSMUSG00000032103	protein_coding	Pus3	ENSMUST00000034615	protein_coding	principal2	9	1	35559460	2019
ENSMUSG00000020633	protein_coding	Dcdc2c	ENSMUST00000020963	protein_coding		12	-1	28552303	1041
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000234627	retained_intron		17	1	71641049	663
ENSMUSG00000024379	protein_coding	Tslp	ENSMUST00000234876	retained_intron		18	1	32816860	1134
ENSMUSG00000039178	protein_coding	Tbc1d19	ENSMUST00000202695	retained_intron		5	1	53809649	795
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000142573	retained_intron		2	1	59612075	2809
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000235094	retained_intron		17	1	71642696	459
ENSMUSG00000031970	protein_coding	Dbndd1	ENSMUST00000177240	protein_coding		8	-1	123515390	1463
ENSMUSG00000079941	protein_coding	Cox5b-ps	ENSMUST00000044043	protein_coding	principal1	13	-1	21501418	390
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000234656	retained_intron		17	1	71642705	401
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000128030	retained_intron		2	1	59630063	437
ENSMUSG00000032103	protein_coding	Pus3	ENSMUST00000121246	protein_coding	alternative2	9	1	35559466	2016
ENSMUSG00000049225	protein_coding	Pdp1	ENSMUST00000108299	protein_coding	alternative1	4	-1	11966427	2588
ENSMUSG00000035403	protein_coding	Crb2	ENSMUST00000147600	nonsense_mediated_decay		2	1	37791171	1132
ENSMUSG00000062742	processed_pseudogene	Gm5239	ENSMUST00000081864	processed_pseudogene		18	1	35536583	365
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000234424	retained_intron		17	1	71648762	745
ENSMUSG00000081407	processed_pseudogene	Gm14568	ENSMUST00000119321	processed_pseudogene		X	1	36376807	294
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000234794	retained_intron		17	1	71648791	297
ENSMUSG00000035403	protein_coding	Crb2	ENSMUST00000137693	processed_transcript		2	1	37795169	502
ENSMUSG00000038656	protein_coding	Cyp3a16	ENSMUST00000031633	protein_coding	principal1	5	-1	145469723	1730
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000234581	retained_intron		17	1	71649895	402
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000139863	protein_coding	principal3	2	1	59646811	7246
ENSMUSG00000083729	processed_pseudogene	Sh3d2c-ps1	ENSMUST00000121498	processed_pseudogene		2	1	23680218	904
ENSMUSG00000079642	protein_coding	Gm6268	ENSMUST00000115253	protein_coding	principal1	X	1	36401280	1453
ENSMUSG00000107586	TEC	Gm44283	ENSMUST00000204461	TEC		2	-1	38019167	3950
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000127013	processed_transcript		2	1	59706844	279
ENSMUSG00000041057	protein_coding	Wdr43	ENSMUST00000234339	retained_intron		17	1	71657096	798
ENSMUSG00000049225	protein_coding	Pdp1	ENSMUST00000056050	protein_coding	principal3	4	-1	11966420	1881
ENSMUSG00000107529	TEC	Gm44291	ENSMUST00000203102	TEC		2	-1	38107296	2865
ENSMUSG00000105270	TEC	Gm42863	ENSMUST00000197875	TEC		5	-1	145507054	2958
ENSMUSG00000117637	antisense	Gm30091	ENSMUST00000234677	antisense		17	-1	71615983	377
ENSMUSG00000073834	protein_coding	Mup11	ENSMUST00000098046	protein_coding	principal1	4	-1	60662411	930
ENSMUSG00000087294	antisense	Gm13556	ENSMUST00000132692	antisense		2	1	38285307	1412
ENSMUSG00000111284	lincRNA	Gm47334	ENSMUST00000215363	lincRNA		9	1	9564087	456
ENSMUSG00000082396	transcribed_processed_pseudogene	Zfp389	ENSMUST00000224437	processed_transcript		13	-1	21506533	1234
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000102743	protein_coding	principal3	11	1	54522847	8189
ENSMUSG00000021501	protein_coding	Caml	ENSMUST00000021963	protein_coding	principal1	13	1	55623005	1382
ENSMUSG00000111061	lincRNA	Gm46102	ENSMUST00000217005	lincRNA		9	-1	9583307	731
ENSMUSG00000082396	transcribed_processed_pseudogene	Zfp389	ENSMUST00000118425	transcribed_processed_pseudogene		13	-1	21505056	675
ENSMUSG00000108155	TEC	Gm44443	ENSMUST00000204396	TEC		2	1	38025795	5633
ENSMUSG00000031970	protein_coding	Dbndd1	ENSMUST00000176155	protein_coding	principal1	8	-1	123515463	1677
ENSMUSG00000019814	protein_coding	Ltv1	ENSMUST00000019950	protein_coding	principal1	10	-1	13193168	2297
ENSMUSG00000106313	processed_pseudogene	Gm9402	ENSMUST00000196849	processed_pseudogene		3	-1	132655782	388
ENSMUSG00000073834	protein_coding	Mup11	ENSMUST00000148206	processed_transcript		4	-1	60659738	592
ENSMUSG00000111317	processed_pseudogene	Gm47333	ENSMUST00000217395	processed_pseudogene		9	1	9434592	302
ENSMUSG00000039178	protein_coding	Tbc1d19	ENSMUST00000201958	nonsense_mediated_decay		5	1	53809654	2242
ENSMUSG00000083373	processed_pseudogene	Gm13392	ENSMUST00000117708	processed_pseudogene		2	1	23908441	150
ENSMUSG00000021501	protein_coding	Caml	ENSMUST00000169228	retained_intron		13	1	55623198	597
ENSMUSG00000102546	processed_pseudogene	Gm9722	ENSMUST00000194568	processed_pseudogene		1	-1	185878885	802
ENSMUSG00000039178	protein_coding	Tbc1d19	ENSMUST00000202599	nonsense_mediated_decay		5	1	53809679	753
ENSMUSG00000100739	lincRNA	Gm28296	ENSMUST00000186151	lincRNA		Y	1	32181634	622
ENSMUSG00000100739	lincRNA	Gm28296	ENSMUST00000185585	lincRNA		Y	1	32181634	437
ENSMUSG00000110505	antisense	Gm45842	ENSMUST00000211876	antisense		8	1	123230799	753
ENSMUSG00000073834	protein_coding	Mup11	ENSMUST00000084544	protein_coding		4	-1	60662358	601
ENSMUSG00000113949	protein_coding	Scamp4	ENSMUST00000079883	protein_coding	principal1	10	1	80602880	1804
ENSMUSG00000039178	protein_coding	Tbc1d19	ENSMUST00000201116	retained_intron		5	1	53832794	450
ENSMUSG00000021501	protein_coding	Caml	ENSMUST00000165154	retained_intron		13	1	55628281	965
ENSMUSG00000024957	protein_coding	Kcnk4	ENSMUST00000237766	processed_transcript		19	-1	6927037	2537
ENSMUSG00000073834	protein_coding	Mup11	ENSMUST00000154733	processed_transcript		4	-1	60660237	302
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000155132	processed_transcript		11	1	54522889	628
ENSMUSG00000039178	protein_coding	Tbc1d19	ENSMUST00000201387	processed_transcript		5	1	53836647	330
ENSMUSG00000019814	protein_coding	Ltv1	ENSMUST00000219824	processed_transcript		10	-1	13192428	664
ENSMUSG00000039178	protein_coding	Tbc1d19	ENSMUST00000202880	processed_transcript		5	1	53891104	653
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000056900	retained_intron		2	1	59742802	4212
ENSMUSG00000103056	TEC	Gm38268	ENSMUST00000195813	TEC		1	-1	186112373	193
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000108895	protein_coding		11	1	54522890	1829
ENSMUSG00000112505	lincRNA	Gm48610	ENSMUST00000218537	lincRNA		12	-1	4576756	399
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000101206	protein_coding	alternative2	11	1	54522890	5864
ENSMUSG00000037570	protein_coding	Mcrs1	ENSMUST00000041190	protein_coding	principal1	15	-1	99251961	1916
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000126271	processed_transcript		2	1	59769362	372
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000136248	processed_transcript		2	1	59779711	333
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000139360	processed_transcript		11	1	54522911	692
ENSMUSG00000019989	protein_coding	Enpp3	ENSMUST00000020169	protein_coding	principal1	10	-1	24836225	4253
ENSMUSG00000095345	lincRNA	Gm21821	ENSMUST00000187288	lincRNA		Y	1	32221119	175
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000207429	protein_coding	alternative2	11	1	54522946	5164
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000162857	retained_intron		2	1	59806068	2255
ENSMUSG00000095345	lincRNA	Gm21821	ENSMUST00000179646	lincRNA		Y	1	32221125	498
ENSMUSG00000110034	sense_intronic	Gm45379	ENSMUST00000211772	sense_intronic		7	1	10716314	549
ENSMUSG00000113949	protein_coding	Scamp4	ENSMUST00000223256	nonsense_mediated_decay		10	1	80602892	444
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000147650	retained_intron		2	1	59841740	3392
ENSMUSG00000056752	protein_coding	Dnah9	ENSMUST00000080665	protein_coding	principal1	11	-1	66168533	13798
ENSMUSG00000117620	processed_pseudogene	Gm50077	ENSMUST00000234799	processed_pseudogene		18	-1	6691317	2714
ENSMUSG00000113949	protein_coding	Scamp4	ENSMUST00000221387	protein_coding		10	1	80602902	411
ENSMUSG00000035168	protein_coding	Tanc1	ENSMUST00000037526	protein_coding	principal3	2	1	59612044	7873
ENSMUSG00000056752	protein_coding	Dnah9	ENSMUST00000130739	protein_coding		11	-1	65927958	837
ENSMUSG00000113949	protein_coding	Scamp4	ENSMUST00000221032	protein_coding		10	1	80602924	278
ENSMUSG00000037570	protein_coding	Mcrs1	ENSMUST00000230444	retained_intron		15	-1	99248964	1521
ENSMUSG00000056752	protein_coding	Dnah9	ENSMUST00000136124	retained_intron		11	-1	65855707	532
ENSMUSG00000019989	protein_coding	Enpp3	ENSMUST00000219861	processed_transcript		10	-1	24785005	1746
ENSMUSG00000056752	protein_coding	Dnah9	ENSMUST00000152386	protein_coding		11	-1	66005195	6031
ENSMUSG00000058756	protein_coding	Thra	ENSMUST00000064187	protein_coding		11	1	98741811	2452
ENSMUSG00000019989	protein_coding	Enpp3	ENSMUST00000218343	nonsense_mediated_decay		10	-1	24797771	1574
ENSMUSG00000056752	protein_coding	Dnah9	ENSMUST00000142836	retained_intron		11	-1	66168551	1797
ENSMUSG00000113949	protein_coding	Scamp4	ENSMUST00000180350	protein_coding	principal1	10	1	80602957	1271
ENSMUSG00000039246	protein_coding	Lyplal1	ENSMUST00000045388	protein_coding	principal1	1	-1	186117310	1578
ENSMUSG00000056752	protein_coding	Dnah9	ENSMUST00000108691	protein_coding		11	-1	66168444	2671
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000049911	protein_coding	principal1	17	-1	25274310	1138
ENSMUSG00000113949	protein_coding	Scamp4	ENSMUST00000221236	retained_intron		10	1	80612223	390
ENSMUSG00000037570	protein_coding	Mcrs1	ENSMUST00000163506	protein_coding		15	-1	99251945	1771
ENSMUSG00000058756	protein_coding	Thra	ENSMUST00000103139	protein_coding	principal1	11	1	98741873	2246
ENSMUSG00000024957	protein_coding	Kcnk4	ENSMUST00000025908	protein_coding	principal1	19	-1	6934515	1763
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000149372	retained_intron		11	1	54596146	4843
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000218995	protein_coding		11	1	54596174	2674
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000137035	protein_coding	principal1	16	-1	58523426	4123
ENSMUSG00000024957	protein_coding	Kcnk4	ENSMUST00000237484	nonsense_mediated_decay		19	-1	6933466	1387
ENSMUSG00000058756	protein_coding	Thra	ENSMUST00000153043	protein_coding		11	1	98742158	535
ENSMUSG00000075552	protein_coding	Cyp3a41b	ENSMUST00000075837	protein_coding	principal1	5	-1	145584730	2064
ENSMUSG00000024957	protein_coding	Kcnk4	ENSMUST00000235279	nonsense_mediated_decay		19	-1	6932877	1175
ENSMUSG00000037570	protein_coding	Mcrs1	ENSMUST00000229656	retained_intron		15	-1	99244248	885
ENSMUSG00000039246	protein_coding	Lyplal1	ENSMUST00000195481	processed_transcript		1	-1	186117288	584
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000220269	retained_intron		11	1	54596174	2797
ENSMUSG00000037570	protein_coding	Mcrs1	ENSMUST00000229143	retained_intron		15	-1	99247209	407
ENSMUSG00000058756	protein_coding	Thra	ENSMUST00000150693	processed_transcript		11	1	98744233	654
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000114358	protein_coding	principal1	16	-1	58524243	2264
ENSMUSG00000058756	protein_coding	Thra	ENSMUST00000124072	protein_coding		11	1	98753586	1240
ENSMUSG00000024957	protein_coding	Kcnk4	ENSMUST00000235836	processed_transcript		19	-1	6934513	493
ENSMUSG00000106033	processed_pseudogene	Gm43381	ENSMUST00000198553	processed_pseudogene		5	-1	145595960	165
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000094536	protein_coding		11	1	54622366	3372
ENSMUSG00000024957	protein_coding	Kcnk4	ENSMUST00000235248	protein_coding		19	-1	6933554	780
ENSMUSG00000037570	protein_coding	Mcrs1	ENSMUST00000229399	nonsense_mediated_decay		15	-1	99249969	485
ENSMUSG00000020546	protein_coding	Stxbp4	ENSMUST00000143203	protein_coding	principal1	11	-1	90638084	5985
ENSMUSG00000105474	processed_pseudogene	Selenok-ps7	ENSMUST00000197069	processed_pseudogene		5	-1	145623367	283
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000108894	protein_coding		11	1	54622366	3475
ENSMUSG00000000740	protein_coding	Rpl13	ENSMUST00000000756	protein_coding	principal1	8	1	123102350	780
ENSMUSG00000037570	protein_coding	Mcrs1	ENSMUST00000231020	retained_intron		15	-1	99248828	960
ENSMUSG00000024957	protein_coding	Kcnk4	ENSMUST00000236443	protein_coding		19	-1	6932827	600
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000239168	protein_coding		11	1	54626339	7131
ENSMUSG00000097462	antisense	9530026P05Rik	ENSMUST00000204449	antisense		6	1	92940329	1740
ENSMUSG00000020546	protein_coding	Stxbp4	ENSMUST00000107872	protein_coding		11	-1	90638076	2529
ENSMUSG00000037570	protein_coding	Mcrs1	ENSMUST00000229671	protein_coding		15	-1	99251952	354
ENSMUSG00000025196	protein_coding	Cpn1	ENSMUST00000026210	protein_coding	principal1	19	-1	43986556	1828
ENSMUSG00000019989	protein_coding	Enpp3	ENSMUST00000218619	retained_intron		10	-1	24836113	1545
ENSMUSG00000037533	protein_coding	Rapgef6	ENSMUST00000136494	protein_coding		11	1	54691432	716
ENSMUSG00000020546	protein_coding	Stxbp4	ENSMUST00000107875	protein_coding		11	-1	90638065	1660
ENSMUSG00000019989	protein_coding	Enpp3	ENSMUST00000217903	nonsense_mediated_decay		10	-1	24831806	550
ENSMUSG00000050623	protein_coding	Catsperz	ENSMUST00000237586	protein_coding		19	-1	6924869	366
ENSMUSG00000020546	protein_coding	Stxbp4	ENSMUST00000020858	protein_coding		11	-1	90638062	1782
ENSMUSG00000037570	protein_coding	Mcrs1	ENSMUST00000229926	protein_coding		15	-1	99251917	598
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000173084	protein_coding	principal1	17	-1	25273383	1286
ENSMUSG00000000740	protein_coding	Rpl13	ENSMUST00000152444	retained_intron		8	1	123102651	713
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000114357	protein_coding	principal1	16	-1	58524185	1918
ENSMUSG00000019989	protein_coding	Enpp3	ENSMUST00000219342	protein_coding		10	-1	24842823	599
ENSMUSG00000020546	protein_coding	Stxbp4	ENSMUST00000123260	protein_coding		11	-1	90548910	2952
ENSMUSG00000096461	IG_V_gene	Igkv14-130	ENSMUST00000196006	IG_V_gene	principal5	6	1	67791046	353
ENSMUSG00000037570	protein_coding	Mcrs1	ENSMUST00000229359	protein_coding		15	-1	99251955	551
ENSMUSG00000025196	protein_coding	Cpn1	ENSMUST00000131882	retained_intron		19	-1	43968693	2212
ENSMUSG00000096461	IG_V_gene	Igkv14-130	ENSMUST00000103307	IG_V_gene	alternative2	6	1	67791046	350
ENSMUSG00000035370	protein_coding	Gm49322	ENSMUST00000218067	nonsense_mediated_decay		10	1	80606021	4517
ENSMUSG00000019989	protein_coding	Enpp3	ENSMUST00000218044	protein_coding		10	-1	24836136	1346
ENSMUSG00000020546	protein_coding	Stxbp4	ENSMUST00000132905	protein_coding		11	-1	90630917	709
ENSMUSG00000019989	protein_coding	Enpp3	ENSMUST00000219968	protein_coding		10	-1	24842740	465
ENSMUSG00000109795	processed_pseudogene	Gm45522	ENSMUST00000210784	processed_pseudogene		8	1	37250821	166
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000149197	processed_transcript		16	-1	58523553	372
ENSMUSG00000035370	protein_coding	Gm49322	ENSMUST00000219462	processed_transcript		10	1	80606815	612
ENSMUSG00000097462	antisense	9530026P05Rik	ENSMUST00000181121	antisense		6	1	92940369	2142
ENSMUSG00000020546	protein_coding	Stxbp4	ENSMUST00000132078	processed_transcript		11	-1	90638073	748
ENSMUSG00000000740	protein_coding	Rpl13	ENSMUST00000132275	retained_intron		8	1	123102653	993
ENSMUSG00000081043	processed_pseudogene	Gm11512	ENSMUST00000119669	processed_pseudogene		11	-1	90539146	663
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000135721	retained_intron		16	-1	58489425	600
ENSMUSG00000019989	protein_coding	Enpp3	ENSMUST00000220209	nonsense_mediated_decay		10	-1	24836172	456
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000149456	protein_coding		16	-1	58523444	540
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000173713	protein_coding	principal1	17	-1	25274310	890
ENSMUSG00000000740	protein_coding	Rpl13	ENSMUST00000129311	retained_intron		8	1	123102653	1969
ENSMUSG00000093906	IG_V_gene	Igkv9-129	ENSMUST00000200578	IG_V_gene	principal5	6	1	67839793	353
ENSMUSG00000097462	antisense	9530026P05Rik	ENSMUST00000205093	antisense		6	1	92940578	873
ENSMUSG00000083268	processed_pseudogene	Gm11511	ENSMUST00000118146	processed_pseudogene		11	-1	90517316	540
ENSMUSG00000097462	antisense	9530026P05Rik	ENSMUST00000181840	antisense		6	1	92940582	995
ENSMUSG00000000740	protein_coding	Rpl13	ENSMUST00000212887	retained_intron		8	1	123103655	488
ENSMUSG00000093906	IG_V_gene	Igkv9-129	ENSMUST00000103308	IG_V_gene	alternative2	6	1	67839793	350
ENSMUSG00000097462	antisense	9530026P05Rik	ENSMUST00000181145	antisense		6	1	92940582	2968
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000126978	protein_coding		16	-1	58524169	449
ENSMUSG00000035370	protein_coding	Gm49322	ENSMUST00000178231	protein_coding	principal1	10	1	80606021	4516
ENSMUSG00000069268	protein_coding	H2bc7	ENSMUST00000105106	protein_coding	principal1	13	-1	23574196	461
ENSMUSG00000097462	antisense	9530026P05Rik	ENSMUST00000204609	antisense		6	1	92940582	1294
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000123918	protein_coding		16	-1	58524169	490
ENSMUSG00000116852	lincRNA	1700102H20Rik	ENSMUST00000232089	lincRNA		17	1	3557824	350
ENSMUSG00000097996	processed_pseudogene	Gm5313	ENSMUST00000182893	processed_pseudogene		6	-1	93137990	987
ENSMUSG00000100236	processed_pseudogene	Gm3841	ENSMUST00000191399	processed_pseudogene		1	1	58785209	451
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000148061	protein_coding		16	-1	58499341	370
ENSMUSG00000108256	TEC	Gm43923	ENSMUST00000203992	TEC		6	1	93194941	2911
ENSMUSG00000116852	lincRNA	1700102H20Rik	ENSMUST00000231344	lincRNA		17	1	3557869	517
ENSMUSG00000084221	processed_pseudogene	Hmgb1-ps4	ENSMUST00000118281	processed_pseudogene		19	-1	6593236	635
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000174216	protein_coding		17	-1	25265869	1144
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000125712	protein_coding		16	-1	58523344	386
ENSMUSG00000071553	protein_coding	Cpa2	ENSMUST00000096066	protein_coding	principal1	6	1	30541582	1388
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000172618	protein_coding	principal1	17	-1	25273914	1559
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000142900	protein_coding		16	-1	58523724	498
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000151510	protein_coding		16	-1	58524134	487
ENSMUSG00000085285	lincRNA	Gm14968	ENSMUST00000155528	lincRNA		19	1	6645687	769
ENSMUSG00000071553	protein_coding	Cpa2	ENSMUST00000133009	retained_intron		6	1	30541642	426
ENSMUSG00000048636	protein_coding	A730049H05Rik	ENSMUST00000057977	protein_coding	principal1	6	1	92816478	2239
ENSMUSG00000084825	lincRNA	2410152P15Rik	ENSMUST00000137405	lincRNA		19	-1	6674548	871
ENSMUSG00000036647	protein_coding	Olfr6	ENSMUST00000213552	protein_coding	principal1	7	-1	106963930	4349
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000137850	retained_intron		16	-1	58507898	837
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000174031	protein_coding	principal1	17	-1	25273534	824
ENSMUSG00000036647	protein_coding	Olfr6	ENSMUST00000040983	protein_coding	principal1	7	-1	106963937	6834
ENSMUSG00000050623	protein_coding	Catsperz	ENSMUST00000237380	protein_coding	alternative2	19	-1	6925359	806
ENSMUSG00000102719	TEC	Gm37760	ENSMUST00000194726	TEC		1	1	58797783	3841
ENSMUSG00000036647	protein_coding	Olfr6	ENSMUST00000213651	protein_coding	principal1	7	-1	106963937	4457
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000145283	processed_transcript		16	-1	58523758	810
ENSMUSG00000022747	protein_coding	St3gal6	ENSMUST00000232391	processed_transcript		16	-1	58514184	639
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000174001	protein_coding	principal1	17	-1	25274622	623
ENSMUSG00000048636	protein_coding	A730049H05Rik	ENSMUST00000133858	processed_transcript		6	1	92827632	2079
ENSMUSG00000058183	protein_coding	Mmel1	ENSMUST00000079269	protein_coding	alternative2	4	1	154869585	2934
ENSMUSG00000036647	protein_coding	Olfr6	ENSMUST00000219365	protein_coding	principal1	7	-1	106956934	951
ENSMUSG00000108286	TEC	Gm44224	ENSMUST00000204131	TEC		6	1	93079108	1463
ENSMUSG00000071478	protein_coding	H2ac7	ENSMUST00000090776	protein_coding	principal1	13	1	23574381	572
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000172569	retained_intron		17	-1	25265339	594
ENSMUSG00000101303	protein_coding	B020011L13Rik	ENSMUST00000188801	protein_coding	principal1	1	1	117781133	2879
ENSMUSG00000058183	protein_coding	Mmel1	ENSMUST00000105635	protein_coding	alternative2	4	1	154871595	2592
ENSMUSG00000100534	lincRNA	Gm816	ENSMUST00000191156	lincRNA		1	-1	77027792	2456
ENSMUSG00000044475	protein_coding	Ascc1	ENSMUST00000219778	processed_transcript		10	1	60002805	1230
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000173621	protein_coding		17	-1	25273590	429
ENSMUSG00000079462	protein_coding	Gm15737	ENSMUST00000113434	protein_coding	principal1	6	1	92869357	4894
ENSMUSG00000058183	protein_coding	Mmel1	ENSMUST00000105634	protein_coding	alternative2	4	1	154871629	2669
ENSMUSG00000097561	lincRNA	4632411P08Rik	ENSMUST00000181005	lincRNA		5	1	29378699	3237
ENSMUSG00000102904	TEC	Gm38265	ENSMUST00000193479	TEC		1	-1	77146992	3766
ENSMUSG00000099534	processed_pseudogene	Gm28169	ENSMUST00000190342	processed_pseudogene		1	1	117842962	345
ENSMUSG00000107655	TEC	Gm44220	ENSMUST00000203784	TEC		6	1	93241720	2487
ENSMUSG00000056459	protein_coding	Zbtb25	ENSMUST00000176102	protein_coding	principal1	12	-1	76357140	2707
ENSMUSG00000050623	protein_coding	Catsperz	ENSMUST00000057716	protein_coding	principal2	19	-1	6925380	784
ENSMUSG00000100305	protein_coding	Gm28360	ENSMUST00000187455	protein_coding	principal1	1	1	117830081	1491
ENSMUSG00000052482	processed_pseudogene	Gm8174	ENSMUST00000064353	processed_pseudogene		15	-1	10561524	1001
ENSMUSG00000025241	protein_coding	Fyco1	ENSMUST00000084715	protein_coding	principal1	9	-1	123851661	7949
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000172868	protein_coding		17	-1	25273867	2755
ENSMUSG00000058183	protein_coding	Mmel1	ENSMUST00000131758	protein_coding		4	1	154882209	592
ENSMUSG00000050623	protein_coding	Catsperz	ENSMUST00000237563	retained_intron		19	-1	6925321	1064
ENSMUSG00000100886	unprocessed_pseudogene	Gm7195	ENSMUST00000190869	unprocessed_pseudogene		1	1	117868522	1707
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000172587	protein_coding		17	-1	25274302	508
ENSMUSG00000058183	protein_coding	Mmel1	ENSMUST00000129623	retained_intron		4	1	154892825	652
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000172520	protein_coding		17	-1	25273600	447
ENSMUSG00000057322	protein_coding	Rpl38	ENSMUST00000106602	protein_coding	principal1	11	1	114668524	371
ENSMUSG00000050623	protein_coding	Catsperz	ENSMUST00000237743	protein_coding		19	-1	6924889	394
ENSMUSG00000056459	protein_coding	Zbtb25	ENSMUST00000176509	protein_coding		12	-1	76368999	1591
ENSMUSG00000034087	protein_coding	Nlrp4b	ENSMUST00000117413	protein_coding	principal1	7	1	10687789	3326
ENSMUSG00000025241	protein_coding	Fyco1	ENSMUST00000184082	protein_coding		9	-1	123851881	2794
ENSMUSG00000101415	protein_coding	Gm28168	ENSMUST00000191265	protein_coding	principal1	1	1	117928015	2630
ENSMUSG00000071553	protein_coding	Cpa2	ENSMUST00000131137	processed_transcript		6	1	30541670	494
ENSMUSG00000056459	protein_coding	Zbtb25	ENSMUST00000176278	protein_coding	principal1	12	-1	76369602	1672
ENSMUSG00000091732	processed_pseudogene	Gm17541	ENSMUST00000080062	processed_pseudogene		12	-1	4689926	525
ENSMUSG00000104337	processed_pseudogene	Gm38280	ENSMUST00000192610	processed_pseudogene		3	-1	60737785	158
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000173231	protein_coding		17	-1	25273155	696
ENSMUSG00000071553	protein_coding	Cpa2	ENSMUST00000142653	retained_intron		6	1	30543208	877
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000220550	processed_transcript		12	1	82169320	363
ENSMUSG00000102298	processed_pseudogene	Gm33707	ENSMUST00000195135	processed_pseudogene		3	-1	60770455	569
ENSMUSG00000057322	protein_coding	Rpl38	ENSMUST00000077915	protein_coding	principal1	11	1	114668548	364
ENSMUSG00000056459	protein_coding	Zbtb25	ENSMUST00000176187	protein_coding		12	-1	76369393	488
ENSMUSG00000015120	protein_coding	Ube2i	ENSMUST00000172462	processed_transcript		17	-1	25273259	366
ENSMUSG00000034087	protein_coding	Nlrp4b	ENSMUST00000047809	protein_coding	principal1	7	1	10687793	3274
ENSMUSG00000057322	protein_coding	Rpl38	ENSMUST00000106599	protein_coding	principal1	11	1	114668609	457
ENSMUSG00000002635	protein_coding	Pdcd2l	ENSMUST00000002710	protein_coding	principal1	7	-1	34196661	1295
ENSMUSG00000056459	protein_coding	Zbtb25	ENSMUST00000176967	protein_coding		12	-1	76369464	438
ENSMUSG00000050623	protein_coding	Catsperz	ENSMUST00000236318	processed_transcript		19	-1	6925337	691
ENSMUSG00000034087	protein_coding	Nlrp4b	ENSMUST00000132990	protein_coding		7	1	10714973	2562
ENSMUSG00000100617	protein_coding	Gm7145	ENSMUST00000185381	protein_coding	principal1	1	1	117965939	1794
ENSMUSG00000071553	protein_coding	Cpa2	ENSMUST00000126426	retained_intron		6	1	30543916	935
ENSMUSG00000057322	protein_coding	Rpl38	ENSMUST00000082092	protein_coding	principal1	11	1	114668626	345
ENSMUSG00000071553	protein_coding	Cpa2	ENSMUST00000146936	retained_intron		6	1	30544485	783
ENSMUSG00000084890	antisense	A830036E02Rik	ENSMUST00000126470	antisense		11	1	99416956	690
ENSMUSG00000034087	protein_coding	Nlrp4b	ENSMUST00000211069	protein_coding		7	1	10718550	788
ENSMUSG00000002635	protein_coding	Pdcd2l	ENSMUST00000148381	protein_coding		7	-1	34196608	959
ENSMUSG00000056459	protein_coding	Zbtb25	ENSMUST00000167011	protein_coding	principal1	12	-1	76369464	1681
ENSMUSG00000025241	protein_coding	Fyco1	ENSMUST00000183700	retained_intron		9	-1	123851886	1179
ENSMUSG00000071553	protein_coding	Cpa2	ENSMUST00000123588	processed_transcript		6	1	30546642	238
ENSMUSG00000002635	protein_coding	Pdcd2l	ENSMUST00000206088	retained_intron		7	-1	34192781	388
ENSMUSG00000058183	protein_coding	Mmel1	ENSMUST00000163732	protein_coding	principal2	4	1	154869585	2935
ENSMUSG00000034087	protein_coding	Nlrp4b	ENSMUST00000211258	protein_coding		7	1	10719249	778
ENSMUSG00000084890	antisense	A830036E02Rik	ENSMUST00000139095	antisense		11	1	99417243	3413
ENSMUSG00000071553	protein_coding	Cpa2	ENSMUST00000144282	retained_intron		6	1	30551903	450
ENSMUSG00000025241	protein_coding	Fyco1	ENSMUST00000216136	retained_intron		9	-1	123844606	714
ENSMUSG00000112042	processed_pseudogene	Gm47402	ENSMUST00000219030	processed_pseudogene		10	1	13205226	420
ENSMUSG00000002635	protein_coding	Pdcd2l	ENSMUST00000125803	processed_transcript		7	-1	34196146	345
ENSMUSG00000084890	antisense	A830036E02Rik	ENSMUST00000132858	antisense		11	1	99417248	456
ENSMUSG00000050623	protein_coding	Catsperz	ENSMUST00000235924	retained_intron		19	-1	6925352	915
ENSMUSG00000058183	protein_coding	Mmel1	ENSMUST00000080559	protein_coding	alternative2	4	1	154869636	2926
ENSMUSG00000025241	protein_coding	Fyco1	ENSMUST00000167595	protein_coding	principal1	9	-1	123851899	7692
ENSMUSG00000112091	processed_pseudogene	Gm47787	ENSMUST00000218257	processed_pseudogene		10	-1	22956584	684
ENSMUSG00000050623	protein_coding	Catsperz	ENSMUST00000237709	retained_intron		19	-1	6925352	970
ENSMUSG00000083859	processed_pseudogene	Gm12003	ENSMUST00000118518	processed_pseudogene		11	-1	12937938	1105
ENSMUSG00000050623	protein_coding	Catsperz	ENSMUST00000236981	retained_intron		19	-1	6925365	897
ENSMUSG00000111340	TEC	Gm47171	ENSMUST00000216052	TEC		9	-1	123646987	2794
ENSMUSG00000084890	antisense	A830036E02Rik	ENSMUST00000128904	antisense		11	1	99419972	2768
ENSMUSG00000038044	protein_coding	Cct8l1	ENSMUST00000045016	protein_coding	principal1	5	1	25516067	1961
ENSMUSG00000040321	protein_coding	Zfp770	ENSMUST00000050668	protein_coding	principal1	2	-1	114201469	4300
ENSMUSG00000100189	sense_intronic	Gm28096	ENSMUST00000191391	sense_intronic		4	1	95151740	824
ENSMUSG00000085377	lincRNA	4930551L18Rik	ENSMUST00000156086	lincRNA		4	-1	95091419	700
ENSMUSG00000084055	processed_pseudogene	Gm12004	ENSMUST00000117869	processed_pseudogene		11	1	12997666	718
ENSMUSG00000040321	protein_coding	Zfp770	ENSMUST00000123562	processed_transcript		2	-1	114201440	2597
ENSMUSG00000023084	protein_coding	Lrrc71	ENSMUST00000023846	protein_coding	principal1	3	-1	87748623	3988
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000121808	protein_coding		18	-1	12862673	3030
ENSMUSG00000095384	protein_coding	1700001F09Rik	ENSMUST00000178178	protein_coding	principal1	14	-1	43347811	884
ENSMUSG00000025608	protein_coding	Podxl	ENSMUST00000026698	protein_coding	principal1	6	-1	31563981	5379
ENSMUSG00000103587	lincRNA	Gm38326	ENSMUST00000194030	lincRNA		3	1	60788361	686
ENSMUSG00000087366	antisense	Junos	ENSMUST00000142292	antisense		4	1	95051534	730
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000048657	protein_coding	principal1	14	1	20674308	4461
ENSMUSG00000069867	protein_coding	Pabpn1l	ENSMUST00000093059	protein_coding	principal2	8	-1	122622739	1148
ENSMUSG00000087366	antisense	Junos	ENSMUST00000125917	antisense		4	1	95052951	560
ENSMUSG00000025608	protein_coding	Podxl	ENSMUST00000136877	processed_transcript		6	-1	31524311	344
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000030201	protein_coding		4	-1	44084177	5384
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000224061	retained_intron		14	1	20674323	605
ENSMUSG00000020475	protein_coding	Pgam2	ENSMUST00000020768	protein_coding	principal1	11	-1	5803733	840
ENSMUSG00000069867	protein_coding	Pabpn1l	ENSMUST00000212966	protein_coding	alternative2	8	-1	122622734	1113
ENSMUSG00000044475	protein_coding	Ascc1	ENSMUST00000050516	protein_coding	principal1	10	1	60002839	1450
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000163230	protein_coding	principal2	16	-1	45409053	2347
ENSMUSG00000046637	protein_coding	Ttc34	ENSMUST00000207854	protein_coding	alternative2	4	1	154837459	4733
ENSMUSG00000101856	lincRNA	1700096K18Rik	ENSMUST00000188465	lincRNA		5	1	25530013	1454
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000224718	retained_intron		14	1	20674336	971
ENSMUSG00000105744	processed_pseudogene	Gm43141	ENSMUST00000199695	processed_pseudogene		5	-1	25532431	274
ENSMUSG00000046637	protein_coding	Ttc34	ENSMUST00000137684	retained_intron		4	1	154860552	652
ENSMUSG00000099583	protein_coding	H3c4	ENSMUST00000105105	protein_coding	principal1	13	1	23575763	1249
ENSMUSG00000023084	protein_coding	Lrrc71	ENSMUST00000174381	retained_intron		3	-1	87748625	3387
ENSMUSG00000044475	protein_coding	Ascc1	ENSMUST00000164083	protein_coding	principal1	10	1	60003327	1473
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000023341	protein_coding	alternative2	16	-1	45408875	2085
ENSMUSG00000023084	protein_coding	Lrrc71	ENSMUST00000172985	processed_transcript		3	-1	87738566	325
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000055858	protein_coding	principal2	7	1	44246722	1982
ENSMUSG00000085452	lincRNA	4930554G24Rik	ENSMUST00000126260	lincRNA		11	-1	14179041	1603
ENSMUSG00000046637	protein_coding	Ttc34	ENSMUST00000050220	protein_coding	principal2	4	1	154856200	3200
ENSMUSG00000020912	protein_coding	Krt12	ENSMUST00000017741	protein_coding	principal1	11	-1	99422259	1852
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000174522	nonsense_mediated_decay		4	-1	44055297	1797
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000224963	retained_intron		14	1	20674339	450
ENSMUSG00000081631	processed_pseudogene	Gm12005	ENSMUST00000121451	processed_pseudogene		11	1	14162079	379
ENSMUSG00000074037	protein_coding	Mc1r	ENSMUST00000098324	protein_coding	principal1	8	1	123407107	3638
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000137702	protein_coding		7	1	44246728	784
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000224492	protein_coding		14	1	20674342	563
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000171328	processed_transcript		16	-1	45408972	708
ENSMUSG00000023084	protein_coding	Lrrc71	ENSMUST00000174581	protein_coding		3	-1	87741048	556
ENSMUSG00000029059	protein_coding	Prxl2b	ENSMUST00000123513	processed_transcript		4	-1	154899038	522
ENSMUSG00000110716	bidirectional_promoter_lncRNA	Gm39271	ENSMUST00000212881	bidirectional_promoter_lncRNA		8	-1	122775423	434
ENSMUSG00000045435	protein_coding	Tmem60	ENSMUST00000115259	protein_coding	principal1	5	1	20882191	1147
ENSMUSG00000059244	lincRNA	Gm10062	ENSMUST00000196473	lincRNA		5	-1	25660155	350
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000167355	nonsense_mediated_decay		16	-1	45400312	830
ENSMUSG00000110615	antisense	Gm45890	ENSMUST00000212043	antisense		8	1	123948790	1026
ENSMUSG00000059244	lincRNA	Gm10062	ENSMUST00000072180	lincRNA		5	-1	25661282	1470
ENSMUSG00000023084	protein_coding	Lrrc71	ENSMUST00000174208	retained_intron		3	-1	87748594	842
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000166512	nonsense_mediated_decay		16	-1	45408913	879
ENSMUSG00000087366	antisense	Junos	ENSMUST00000124166	antisense		4	1	95053240	611
ENSMUSG00000045435	protein_coding	Tmem60	ENSMUST00000196723	processed_transcript		5	1	20882507	2178
ENSMUSG00000110615	antisense	Gm45890	ENSMUST00000212188	antisense		8	1	123949420	1052
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000223751	protein_coding		14	1	20674343	4196
ENSMUSG00000106144	lincRNA	Gm43972	ENSMUST00000181398	lincRNA		5	1	25659809	1467
ENSMUSG00000080734	processed_pseudogene	Gm12006	ENSMUST00000120786	processed_pseudogene		11	1	14487613	403
ENSMUSG00000042569	protein_coding	Dhrs7b	ENSMUST00000108718	protein_coding	alternative2	11	1	60830679	3277
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000224876	nonsense_mediated_decay		14	1	20674354	833
ENSMUSG00000087366	antisense	Junos	ENSMUST00000143242	antisense		4	1	95075669	864
ENSMUSG00000106241	TEC	Gm43143	ENSMUST00000196083	TEC		5	-1	25689395	2023
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000188111	protein_coding	principal2	7	1	44246735	2131
ENSMUSG00000110615	antisense	Gm45890	ENSMUST00000212356	antisense		8	1	123949432	545
ENSMUSG00000110615	antisense	Gm45890	ENSMUST00000212250	antisense		8	1	123952523	599
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000225108	protein_coding		14	1	20674406	866
ENSMUSG00000087366	antisense	Junos	ENSMUST00000133772	antisense		4	1	95075816	635
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000224754	protein_coding		14	1	20674429	680
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000107040	protein_coding		11	1	103101682	1959
ENSMUSG00000087366	antisense	Junos	ENSMUST00000130684	antisense		4	1	95093510	614
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000228545	protein_coding		14	1	20682820	715
ENSMUSG00000101013	antisense	A630072M18Rik	ENSMUST00000190567	antisense		5	1	20950989	5410
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000185481	protein_coding		7	1	44246754	759
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000218402	protein_coding		12	1	4592638	851
ENSMUSG00000097919	protein_coding	Gm27021	ENSMUST00000181333	protein_coding	principal1	8	-1	120668079	758
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000144905	processed_transcript		7	1	44246787	1966
ENSMUSG00000042569	protein_coding	Dhrs7b	ENSMUST00000042281	protein_coding	principal2	11	1	60830631	1553
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000224791	nonsense_mediated_decay		14	1	20689074	724
ENSMUSG00000085917	processed_pseudogene	Gm15899	ENSMUST00000128586	processed_pseudogene		8	-1	122683839	238
ENSMUSG00000087366	antisense	Junos	ENSMUST00000125438	antisense		4	1	95098704	559
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000171855	processed_transcript		16	-1	45409023	763
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000165910	processed_transcript		16	-1	45409041	548
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000166630	processed_transcript		16	-1	45409017	622
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000224793	retained_intron		14	1	20689645	763
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000167552	retained_intron		16	-1	45408864	742
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000102936	protein_coding	principal1	4	-1	44072778	2920
ENSMUSG00000087366	antisense	Junos	ENSMUST00000128094	antisense		4	1	95123995	830
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000172297	processed_transcript		16	-1	45409007	235
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000225566	retained_intron		14	1	20691270	557
ENSMUSG00000020918	protein_coding	Kat2a	ENSMUST00000006973	protein_coding	alternative2	11	-1	100712465	3043
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000224722	retained_intron		14	1	20691680	472
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000172533	nonsense_mediated_decay		4	-1	44066920	2464
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000173234	protein_coding		4	-1	44066960	2149
ENSMUSG00000039367	protein_coding	Sec24c	ENSMUST00000225903	retained_intron		14	1	20691823	505
ENSMUSG00000030022	protein_coding	Adamts9	ENSMUST00000113438	protein_coding	principal1	6	-1	92943492	8016
ENSMUSG00000029059	protein_coding	Prxl2b	ENSMUST00000030935	protein_coding	principal1	4	-1	154899110	883
ENSMUSG00000039968	protein_coding	Rsbn1l	ENSMUST00000196780	protein_coding	alternative2	5	-1	20956398	7651
ENSMUSG00000022661	protein_coding	Cd200	ENSMUST00000172091	processed_transcript		16	-1	45409018	281
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000133709	nonsense_mediated_decay		4	-1	44072624	871
ENSMUSG00000039968	protein_coding	Rsbn1l	ENSMUST00000197493	retained_intron		5	-1	20922399	2289
ENSMUSG00000020918	protein_coding	Kat2a	ENSMUST00000103118	protein_coding	principal4	11	-1	100712465	3046
ENSMUSG00000020107	protein_coding	Anapc16	ENSMUST00000182898	protein_coding	principal1	10	-1	60003135	1852
ENSMUSG00000029059	protein_coding	Prxl2b	ENSMUST00000132281	protein_coding		4	-1	154899135	451
ENSMUSG00000039968	protein_coding	Rsbn1l	ENSMUST00000197089	protein_coding		5	-1	20945504	357
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000173274	protein_coding		4	-1	44067061	1021
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000173976	retained_intron		4	-1	44063173	592
ENSMUSG00000039968	protein_coding	Rsbn1l	ENSMUST00000036489	protein_coding	principal2	5	-1	20951822	5550
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000146155	protein_coding		7	1	44246787	988
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000092559	nonsense_mediated_decay		11	1	103101682	2083
ENSMUSG00000080904	processed_pseudogene	Gm11966	ENSMUST00000119907	processed_pseudogene		11	-1	5818583	87
ENSMUSG00000082485	processed_pseudogene	Gm15693	ENSMUST00000120470	processed_pseudogene		16	1	56758265	637
ENSMUSG00000072419	protein_coding	Dppa2	ENSMUST00000232448	protein_coding	principal1	16	1	48303908	2447
ENSMUSG00000052684	protein_coding	Jun	ENSMUST00000107094	protein_coding	principal1	4	-1	95052222	3189
ENSMUSG00000028030	protein_coding	Tbck	ENSMUST00000169172	protein_coding	principal1	3	1	132684144	6578
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000172514	retained_intron		4	-1	44084167	854
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000144985	protein_coding		4	-1	44083923	665
ENSMUSG00000039357	protein_coding	Fut11	ENSMUST00000048016	protein_coding	principal1	14	1	20694968	4163
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000107949	protein_coding	principal2	7	1	44246787	3610
ENSMUSG00000110334	processed_pseudogene	Gm19921	ENSMUST00000210505	processed_pseudogene		8	1	53911739	703
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000173569	processed_transcript		4	-1	44072736	897
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000084937	protein_coding	principal2	7	1	44246787	2092
ENSMUSG00000030022	protein_coding	Adamts9	ENSMUST00000125490	retained_intron		6	-1	92860145	2541
ENSMUSG00000072419	protein_coding	Dppa2	ENSMUST00000097175	protein_coding	principal1	16	1	48310477	1948
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000173383	protein_coding		4	-1	44072602	658
ENSMUSG00000039357	protein_coding	Fut11	ENSMUST00000225804	retained_intron		14	1	20694977	3422
ENSMUSG00000030022	protein_coding	Adamts9	ENSMUST00000130314	retained_intron		6	-1	92860155	4519
ENSMUSG00000075000	protein_coding	Nrbf2	ENSMUST00000077839	protein_coding	principal1	10	-1	67285305	1813
ENSMUSG00000030022	protein_coding	Adamts9	ENSMUST00000203690	retained_intron		6	-1	92854632	2683
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000128439	protein_coding		4	-1	44073017	479
ENSMUSG00000097577	antisense	6230400D17Rik	ENSMUST00000180987	antisense		14	-1	20703012	1554
ENSMUSG00000116889	processed_pseudogene	Gm49771	ENSMUST00000231810	processed_pseudogene		16	1	48368642	111
ENSMUSG00000097577	antisense	6230400D17Rik	ENSMUST00000224976	antisense		14	-1	20703028	1019
ENSMUSG00000028030	protein_coding	Tbck	ENSMUST00000198147	retained_intron		3	1	132684168	5195
ENSMUSG00000030022	protein_coding	Adamts9	ENSMUST00000136751	processed_transcript		6	-1	92943492	1356
ENSMUSG00000104142	TEC	Gm37141	ENSMUST00000191938	TEC		4	-1	151916414	422
ENSMUSG00000075000	protein_coding	Nrbf2	ENSMUST00000159002	protein_coding		10	-1	67285180	583
ENSMUSG00000028479	protein_coding	Gne	ENSMUST00000140724	protein_coding		4	-1	44073018	511
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000107950	protein_coding	principal2	7	1	44246789	3336
ENSMUSG00000024952	protein_coding	Rps6ka4	ENSMUST00000237442	protein_coding	principal1	19	-1	6840636	2486
ENSMUSG00000030022	protein_coding	Adamts9	ENSMUST00000167391	protein_coding		6	-1	92901441	6033
ENSMUSG00000020107	protein_coding	Anapc16	ENSMUST00000020307	protein_coding		10	-1	60003111	1379
ENSMUSG00000024952	protein_coding	Rps6ka4	ENSMUST00000236175	retained_intron		19	-1	6839585	597
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000107948	protein_coding	principal2	7	1	44246791	2908
ENSMUSG00000020107	protein_coding	Anapc16	ENSMUST00000182925	processed_transcript		10	-1	59990383	460
ENSMUSG00000110573	protein_coding	Gm5485	ENSMUST00000212197	protein_coding	principal1	16	-1	48412416	628
ENSMUSG00000024952	protein_coding	Rps6ka4	ENSMUST00000236334	nonsense_mediated_decay		19	-1	6840577	367
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000136210	processed_transcript		7	1	44246797	956
ENSMUSG00000039546	protein_coding	Ajap1	ENSMUST00000105646	protein_coding	principal1	4	-1	153482811	3048
ENSMUSG00000100988	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000189800	processed_transcript		Y	1	66158903	1104
ENSMUSG00000024952	protein_coding	Rps6ka4	ENSMUST00000237793	nonsense_mediated_decay		19	-1	6840616	469
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000187524	protein_coding		7	1	44246799	676
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000138978	processed_transcript		7	1	44246800	754
ENSMUSG00000024952	protein_coding	Rps6ka4	ENSMUST00000237217	processed_transcript		19	-1	6840592	345
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000188476	processed_transcript		7	1	44246808	509
ENSMUSG00000039546	protein_coding	Ajap1	ENSMUST00000149177	nonsense_mediated_decay		4	-1	153482179	600
ENSMUSG00000063787	protein_coding	Chchd1	ENSMUST00000071215	protein_coding	principal1	14	1	20703006	616
ENSMUSG00000020107	protein_coding	Anapc16	ENSMUST00000182116	protein_coding		10	-1	60002995	581
ENSMUSG00000100988	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000188388	processed_transcript		Y	1	66158959	543
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000187581	processed_transcript		7	1	44246818	367
ENSMUSG00000024952	protein_coding	Rps6ka4	ENSMUST00000237303	retained_intron		19	-1	6840612	361
ENSMUSG00000100988	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000185551	processed_transcript		Y	1	66158960	255
ENSMUSG00000036800	protein_coding	Fam135b	ENSMUST00000022953	protein_coding	principal1	15	-1	71727838	18692
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000145653	protein_coding		7	1	44247231	970
ENSMUSG00000100988	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000188567	processed_transcript		Y	1	66158991	302
ENSMUSG00000100988	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000190605	processed_transcript		Y	1	66159003	397
ENSMUSG00000028972	protein_coding	Car6	ENSMUST00000105683	protein_coding		4	-1	150198470	1460
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000217981	retained_intron		12	1	4593008	3968
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000071296	protein_coding	principal2	7	1	44247442	4201
ENSMUSG00000063787	protein_coding	Chchd1	ENSMUST00000226072	nonsense_mediated_decay		14	1	20703058	578
ENSMUSG00000100988	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000191432	transcribed_unprocessed_pseudogene		Y	1	66160510	615
ENSMUSG00000020107	protein_coding	Anapc16	ENSMUST00000182912	protein_coding		10	-1	60003086	566
ENSMUSG00000024952	protein_coding	Rps6ka4	ENSMUST00000170516	protein_coding	principal1	19	-1	6840601	3105
ENSMUSG00000085390	lincRNA	Gm13115	ENSMUST00000156438	lincRNA		4	1	153907386	620
ENSMUSG00000031520	protein_coding	Vegfc	ENSMUST00000033919	protein_coding	principal1	8	1	54077606	2449
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000130749	processed_transcript		11	1	103101686	586
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000191537	protein_coding	alternative2	7	1	44248252	872
ENSMUSG00000063787	protein_coding	Chchd1	ENSMUST00000224132	retained_intron		14	1	20703099	419
ENSMUSG00000020107	protein_coding	Anapc16	ENSMUST00000182152	protein_coding		10	-1	60002769	847
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000140372	protein_coding		11	1	103101686	900
ENSMUSG00000024952	protein_coding	Rps6ka4	ENSMUST00000025903	protein_coding	principal1	19	-1	6840601	3105
ENSMUSG00000036800	protein_coding	Fam135b	ENSMUST00000229634	retained_intron		15	-1	71462400	1493
ENSMUSG00000063787	protein_coding	Chchd1	ENSMUST00000225527	retained_intron		14	1	20703142	388
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000188382	protein_coding	principal2	7	1	44249594	2301
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000146176	retained_intron		11	1	103101709	646
ENSMUSG00000118181	processed_transcript	CAAA01066123.1	ENSMUST00000235920	processed_transcript		19	-1	6829738	655
ENSMUSG00000031520	protein_coding	Vegfc	ENSMUST00000209703	processed_transcript		8	1	54077717	501
ENSMUSG00000100988	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000189396	processed_transcript		Y	1	66160947	229
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000134884	protein_coding		11	1	103101712	828
ENSMUSG00000031520	protein_coding	Vegfc	ENSMUST00000210831	protein_coding		8	1	54077779	555
ENSMUSG00000100988	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000190093	processed_transcript		Y	1	66160947	542
ENSMUSG00000020107	protein_coding	Anapc16	ENSMUST00000183093	retained_intron		10	-1	59991080	457
ENSMUSG00000100988	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000190098	processed_transcript		Y	1	66160947	327
ENSMUSG00000005640	protein_coding	Insrr	ENSMUST00000029711	protein_coding	principal1	3	1	87796951	5102
ENSMUSG00000045411	protein_coding	2410002F23Rik	ENSMUST00000186606	protein_coding	alternative2	7	1	44249965	748
ENSMUSG00000020107	protein_coding	Anapc16	ENSMUST00000183113	retained_intron		10	-1	59998310	2464
ENSMUSG00000063787	protein_coding	Chchd1	ENSMUST00000224633	protein_coding		14	1	20703151	557
ENSMUSG00000100988	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000188083	processed_transcript		Y	1	66162442	675
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000162338	retained_intron		11	1	103101726	605
ENSMUSG00000036800	protein_coding	Fam135b	ENSMUST00000230569	retained_intron		15	-1	71727838	1688
ENSMUSG00000022886	protein_coding	Prl2a1	ENSMUST00000023602	protein_coding	principal1	13	1	27801654	884
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000129870	nonsense_mediated_decay		11	1	103103021	961
ENSMUSG00000093705	unprocessed_pseudogene	Vmn1r-ps142	ENSMUST00000175707	unprocessed_pseudogene		17	-1	20427283	852
ENSMUSG00000036800	protein_coding	Fam135b	ENSMUST00000229189	protein_coding		15	-1	71726733	670
ENSMUSG00000022339	protein_coding	Ebag9	ENSMUST00000227691	protein_coding	principal1	15	1	44619175	1945
ENSMUSG00000028972	protein_coding	Car6	ENSMUST00000030817	protein_coding	principal1	4	-1	150201332	1567
ENSMUSG00000083562	processed_pseudogene	Gm13234	ENSMUST00000120010	processed_pseudogene		4	1	145632504	747
ENSMUSG00000090788	transcribed_unprocessed_pseudogene	Gm9597	ENSMUST00000171913	transcribed_unprocessed_pseudogene		14	1	43386214	602
ENSMUSG00000022339	protein_coding	Ebag9	ENSMUST00000228648	protein_coding		15	1	44619429	456
ENSMUSG00000111865	TEC	Gm47687	ENSMUST00000217582	TEC		10	-1	31452082	3826
ENSMUSG00000090788	transcribed_unprocessed_pseudogene	Gm9597	ENSMUST00000227632	processed_transcript		14	1	43386214	1387
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000139374	processed_transcript		11	1	103103074	807
ENSMUSG00000115544	processed_pseudogene	Gm49281	ENSMUST00000226477	processed_pseudogene		15	-1	29948370	94
ENSMUSG00000022339	protein_coding	Ebag9	ENSMUST00000226165	protein_coding	principal1	15	1	44619440	1931
ENSMUSG00000115213	unprocessed_pseudogene	Gm49315	ENSMUST00000226747	unprocessed_pseudogene		14	-1	43400147	374
ENSMUSG00000115080	processed_pseudogene	Gm5212	ENSMUST00000226317	processed_pseudogene		15	1	30012294	772
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000152971	protein_coding		11	1	103103076	434
ENSMUSG00000093454	unprocessed_pseudogene	Vmn1r-ps143	ENSMUST00000176730	unprocessed_pseudogene		17	-1	20433433	604
ENSMUSG00000028972	protein_coding	Car6	ENSMUST00000134648	processed_transcript		4	-1	150196123	749
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000147701	retained_intron		11	1	103103108	356
ENSMUSG00000028972	protein_coding	Car6	ENSMUST00000126449	processed_transcript		4	-1	150198203	727
ENSMUSG00000022755	protein_coding	Adgrg7	ENSMUST00000023437	protein_coding	principal1	16	-1	56795855	2698
ENSMUSG00000005640	protein_coding	Insrr	ENSMUST00000166771	retained_intron		3	1	87796965	2610
ENSMUSG00000026029	protein_coding	Casp8	ENSMUST00000027189	protein_coding	principal3	1	1	58795374	2585
ENSMUSG00000022339	protein_coding	Ebag9	ENSMUST00000022964	protein_coding	principal1	15	1	44619591	1613
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000142630	retained_intron		11	1	103103252	815
ENSMUSG00000102490	processed_pseudogene	Gm36985	ENSMUST00000195595	processed_pseudogene		3	1	60860707	379
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000150780	retained_intron		11	1	103104705	971
ENSMUSG00000030036	protein_coding	Mogs	ENSMUST00000032114	protein_coding	principal1	6	1	83115496	2780
ENSMUSG00000035407	protein_coding	Kank4	ENSMUST00000102790	protein_coding	principal1	4	-1	98817537	4795
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000161013	processed_transcript		11	1	103106183	399
ENSMUSG00000101363	processed_pseudogene	Gm29490	ENSMUST00000190923	processed_pseudogene		1	1	118040649	342
ENSMUSG00000035407	protein_coding	Kank4	ENSMUST00000137270	processed_transcript		4	-1	98771475	497
ENSMUSG00000030036	protein_coding	Mogs	ENSMUST00000145403	retained_intron		6	1	83116516	684
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000001565	protein_coding	principal1	17	-1	35673739	1679
ENSMUSG00000110403	TEC	Gm45553	ENSMUST00000209929	TEC		8	-1	54514150	507
ENSMUSG00000026029	protein_coding	Casp8	ENSMUST00000191201	protein_coding	alternative2	1	1	58795477	1849
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000124965	processed_transcript		11	1	103106204	502
ENSMUSG00000107182	TEC	Gm43268	ENSMUST00000201536	TEC		5	1	53905164	4055
ENSMUSG00000005640	protein_coding	Insrr	ENSMUST00000166866	processed_transcript		3	1	87801943	376
ENSMUSG00000100703	transcribed_unprocessed_pseudogene	Gm28358	ENSMUST00000187860	processed_transcript		1	1	118008769	636
ENSMUSG00000085843	antisense	Kank4os	ENSMUST00000133455	antisense		4	1	98793768	2251
ENSMUSG00000107173	TEC	Gm43266	ENSMUST00000201049	TEC		5	1	53918444	1771
ENSMUSG00000100703	transcribed_unprocessed_pseudogene	Gm28358	ENSMUST00000189292	transcribed_unprocessed_pseudogene		1	1	118010511	223
ENSMUSG00000056938	protein_coding	Acbd4	ENSMUST00000024492	protein_coding	principal1	11	1	103101688	2075
ENSMUSG00000005640	protein_coding	Insrr	ENSMUST00000107582	protein_coding	principal1	3	1	87797094	4694
ENSMUSG00000040263	protein_coding	Klhdc4	ENSMUST00000045884	protein_coding	principal1	8	-1	121829569	2078
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000162927	retained_intron		17	-1	35668760	920
ENSMUSG00000100177	unprocessed_pseudogene	Gm29489	ENSMUST00000188934	unprocessed_pseudogene		1	1	118030315	324
ENSMUSG00000101266	lincRNA	Gm29234	ENSMUST00000187452	lincRNA		2	-1	114273435	1262
ENSMUSG00000057454	protein_coding	Lypd3	ENSMUST00000080718	protein_coding	principal1	7	1	24636550	1649
ENSMUSG00000026029	protein_coding	Casp8	ENSMUST00000165549	protein_coding	principal3	1	1	58802502	1917
ENSMUSG00000012777	protein_coding	Acp4	ENSMUST00000107945	protein_coding		7	-1	44257378	1634
ENSMUSG00000026029	protein_coding	Casp8	ENSMUST00000190213	protein_coding	alternative2	1	1	58802653	1628
ENSMUSG00000097215	antisense	Gm26550	ENSMUST00000180699	antisense		7	-1	24637916	1184
ENSMUSG00000012777	protein_coding	Acp4	ENSMUST00000118216	protein_coding	principal1	7	-1	44257378	1454
ENSMUSG00000106040	unprocessed_pseudogene	Cyp3a63-ps	ENSMUST00000196626	unprocessed_pseudogene		5	-1	145633993	1170
ENSMUSG00000027694	transcribed_processed_pseudogene	Gm8325	ENSMUST00000193411	processed_transcript		3	1	60877014	182
ENSMUSG00000028030	protein_coding	Tbck	ENSMUST00000029664	processed_transcript		3	1	132684200	3170
ENSMUSG00000027694	transcribed_processed_pseudogene	Gm8325	ENSMUST00000099086	transcribed_processed_pseudogene		3	1	60877025	453
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000160535	retained_intron		17	-1	35669837	731
ENSMUSG00000012777	protein_coding	Acp4	ENSMUST00000012921	protein_coding		7	-1	44257205	1178
ENSMUSG00000034724	protein_coding	Cnot6l	ENSMUST00000155901	protein_coding	principal3	5	-1	96161990	8564
ENSMUSG00000099419	antisense	1700001D01Rik	ENSMUST00000188654	antisense		8	-1	61288872	565
ENSMUSG00000089708	antisense	5330439A09Rik	ENSMUST00000162770	antisense		8	-1	54600987	1117
ENSMUSG00000028030	protein_coding	Tbck	ENSMUST00000196491	processed_transcript		3	1	132786910	1045
ENSMUSG00000105691	TEC	Gm42876	ENSMUST00000196989	TEC		3	1	132806253	3215
ENSMUSG00000057858	protein_coding	Fam204a	ENSMUST00000065286	protein_coding	principal1	19	-1	60226697	2035
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000160734	protein_coding	principal1	17	-1	35673618	1569
ENSMUSG00000105719	TEC	Gm42872	ENSMUST00000200026	TEC		3	1	132767407	1967
ENSMUSG00000102564	antisense	Gm37035	ENSMUST00000194809	antisense		3	-1	61003786	2148
ENSMUSG00000040263	protein_coding	Klhdc4	ENSMUST00000174709	retained_intron		8	-1	121829540	2834
ENSMUSG00000099719	unprocessed_pseudogene	Gm28802	ENSMUST00000188624	unprocessed_pseudogene		1	-1	58892792	944
ENSMUSG00000041143	protein_coding	Tmco4	ENSMUST00000043042	protein_coding	principal1	4	1	138972892	2922
ENSMUSG00000091805	protein_coding	Vmn2r108	ENSMUST00000167314	protein_coding	principal2	17	-1	20481331	8709
ENSMUSG00000062551	protein_coding	Prl2c1	ENSMUST00000110335	protein_coding	alternative2	13	1	27849342	852
ENSMUSG00000040263	protein_coding	Klhdc4	ENSMUST00000174206	retained_intron		8	-1	121797428	911
ENSMUSG00000034724	protein_coding	Cnot6l	ENSMUST00000152490	retained_intron		5	-1	96086933	3040
ENSMUSG00000062551	protein_coding	Prl2c1	ENSMUST00000054932	protein_coding	principal2	13	1	27849402	681
ENSMUSG00000091805	protein_coding	Vmn2r108	ENSMUST00000232850	protein_coding	alternative2	17	-1	20481331	8601
ENSMUSG00000091805	protein_coding	Vmn2r108	ENSMUST00000233382	protein_coding		17	-1	20481331	8493
ENSMUSG00000078963	protein_coding	Hsbp1l1	ENSMUST00000237192	protein_coding	principal1	18	-1	80236833	1104
ENSMUSG00000040263	protein_coding	Klhdc4	ENSMUST00000174717	protein_coding		8	-1	121829480	1662
ENSMUSG00000091805	protein_coding	Vmn2r108	ENSMUST00000233572	protein_coding		17	-1	20481331	8585
ENSMUSG00000091805	protein_coding	Vmn2r108	ENSMUST00000233830	protein_coding		17	-1	20481331	8477
ENSMUSG00000091805	protein_coding	Vmn2r108	ENSMUST00000232949	nonsense_mediated_decay		17	-1	20481331	8378
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000160752	nonsense_mediated_decay		17	-1	35673703	1569
ENSMUSG00000113672	processed_pseudogene	Gm34165	ENSMUST00000222012	processed_pseudogene		13	1	27929606	1174
ENSMUSG00000091805	protein_coding	Vmn2r108	ENSMUST00000233143	nonsense_mediated_decay		17	-1	20481331	8270
ENSMUSG00000003418	protein_coding	St8sia6	ENSMUST00000003509	protein_coding	principal1	2	-1	13794064	7618
ENSMUSG00000078963	protein_coding	Hsbp1l1	ENSMUST00000166219	protein_coding	principal1	18	-1	80247102	1251
ENSMUSG00000021866	protein_coding	Anxa11	ENSMUST00000022416	protein_coding	principal1	14	1	25842156	2394
ENSMUSG00000040263	protein_coding	Klhdc4	ENSMUST00000174665	nonsense_mediated_decay		8	-1	121829480	1676
ENSMUSG00000113281	processed_pseudogene	Gm11360	ENSMUST00000221898	processed_pseudogene		13	1	27956153	262
ENSMUSG00000091805	protein_coding	Vmn2r108	ENSMUST00000233388	nonsense_mediated_decay		17	-1	20481331	8162
ENSMUSG00000040263	protein_coding	Klhdc4	ENSMUST00000174192	protein_coding		8	-1	121829480	1584
ENSMUSG00000040263	protein_coding	Klhdc4	ENSMUST00000172507	processed_transcript		8	-1	121805320	544
ENSMUSG00000113916	processed_pseudogene	Gm18881	ENSMUST00000220450	processed_pseudogene		13	1	28006512	1545
ENSMUSG00000057858	protein_coding	Fam204a	ENSMUST00000235995	processed_transcript		19	-1	60226669	1146
ENSMUSG00000041143	protein_coding	Tmco4	ENSMUST00000050949	protein_coding	principal1	4	1	138972905	3318
ENSMUSG00000040263	protein_coding	Klhdc4	ENSMUST00000172954	retained_intron		8	-1	121801599	633
ENSMUSG00000081885	processed_pseudogene	Gm13231	ENSMUST00000119218	processed_pseudogene		4	1	145641357	2850
ENSMUSG00000027765	protein_coding	P2ry1	ENSMUST00000029331	protein_coding	principal1	3	1	61002795	3886
ENSMUSG00000108470	lincRNA	Gm4598	ENSMUST00000206756	lincRNA		7	1	24661294	1080
ENSMUSG00000040263	protein_coding	Klhdc4	ENSMUST00000172470	retained_intron		8	-1	121829509	478
ENSMUSG00000108787	TEC	2200007N16Rik	ENSMUST00000206367	TEC		7	1	24666733	238
ENSMUSG00000054408	protein_coding	Spcs3	ENSMUST00000067476	protein_coding	principal1	8	-1	54529998	3466
ENSMUSG00000095517	processed_pseudogene	Gm13249	ENSMUST00000177803	processed_pseudogene		4	-1	145647115	345
ENSMUSG00000040263	protein_coding	Klhdc4	ENSMUST00000174255	nonsense_mediated_decay		8	-1	121829504	395
ENSMUSG00000027765	protein_coding	P2ry1	ENSMUST00000193201	protein_coding	principal1	3	1	61002795	3614
ENSMUSG00000086677	antisense	Tvp23bos	ENSMUST00000148598	antisense		11	-1	62921592	1011
ENSMUSG00000087039	antisense	Cdrt4os2	ENSMUST00000128675	antisense		11	-1	62951079	494
ENSMUSG00000043537	protein_coding	Vmn1r225	ENSMUST00000233982	protein_coding	principal2	17	1	20498158	3986
ENSMUSG00000034724	protein_coding	Cnot6l	ENSMUST00000036646	nonsense_mediated_decay		5	-1	96161755	3314
ENSMUSG00000057858	protein_coding	Fam204a	ENSMUST00000235293	nonsense_mediated_decay		19	-1	60226677	1598
ENSMUSG00000027765	protein_coding	P2ry1	ENSMUST00000193943	protein_coding	principal1	3	1	61002799	2203
ENSMUSG00000041143	protein_coding	Tmco4	ENSMUST00000124835	processed_transcript		4	1	138972909	1992
ENSMUSG00000043537	protein_coding	Vmn1r225	ENSMUST00000233346	protein_coding	alternative2	17	1	20498158	3781
ENSMUSG00000041143	protein_coding	Tmco4	ENSMUST00000123636	protein_coding		4	1	138972888	660
ENSMUSG00000021866	protein_coding	Anxa11	ENSMUST00000124704	retained_intron		14	1	25842183	2643
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000162894	retained_intron		17	-1	35673688	925
ENSMUSG00000057858	protein_coding	Fam204a	ENSMUST00000238054	protein_coding	principal1	19	-1	60226686	951
ENSMUSG00000043537	protein_coding	Vmn1r225	ENSMUST00000061660	protein_coding	principal2	17	1	20502299	897
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000160039	protein_coding		17	-1	35673690	660
ENSMUSG00000031519	protein_coding	Asb5	ENSMUST00000209937	processed_transcript		8	1	54529580	425
ENSMUSG00000021866	protein_coding	Anxa11	ENSMUST00000112364	protein_coding		14	1	25842183	1625
ENSMUSG00000003418	protein_coding	St8sia6	ENSMUST00000150781	processed_transcript		2	-1	13793293	810
ENSMUSG00000026358	protein_coding	Rgs1	ENSMUST00000189061	protein_coding	principal1	1	-1	144249242	3841
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000162266	protein_coding		17	-1	35673517	367
ENSMUSG00000104354	antisense	Gm37126	ENSMUST00000195289	antisense		2	1	13672516	883
ENSMUSG00000034724	protein_coding	Cnot6l	ENSMUST00000122003	protein_coding		5	-1	96161547	2089
ENSMUSG00000057858	protein_coding	Fam204a	ENSMUST00000237339	nonsense_mediated_decay		19	-1	60226701	725
ENSMUSG00000057858	protein_coding	Fam204a	ENSMUST00000238119	nonsense_mediated_decay		19	-1	60226697	634
ENSMUSG00000021866	protein_coding	Anxa11	ENSMUST00000133547	retained_intron		14	1	25842183	2733
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000159671	retained_intron		17	-1	35673681	620
ENSMUSG00000057858	protein_coding	Fam204a	ENSMUST00000237120	retained_intron		19	-1	60226694	4184
ENSMUSG00000034724	protein_coding	Cnot6l	ENSMUST00000137066	retained_intron		5	-1	96129028	782
ENSMUSG00000021898	protein_coding	Asb14	ENSMUST00000238987	protein_coding	alternative2	14	1	26894557	2062
ENSMUSG00000098609	antisense	Anxa11os	ENSMUST00000184083	antisense		14	-1	25870266	2479
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000162604	retained_intron		17	-1	35673298	827
ENSMUSG00000114015	unprocessed_pseudogene	Gm47417	ENSMUST00000223021	unprocessed_pseudogene		13	1	63748751	300
ENSMUSG00000034724	protein_coding	Cnot6l	ENSMUST00000129646	protein_coding		5	-1	96161742	526
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000160711	processed_transcript		17	-1	35673559	271
ENSMUSG00000028072	protein_coding	Ntrk1	ENSMUST00000029712	protein_coding	principal1	3	-1	87795162	2588
ENSMUSG00000114092	lincRNA	Gm47418	ENSMUST00000222072	lincRNA		13	1	63794106	495
ENSMUSG00000034724	protein_coding	Cnot6l	ENSMUST00000141383	protein_coding		5	-1	96161871	329
ENSMUSG00000026358	protein_coding	Rgs1	ENSMUST00000170870	retained_intron		1	-1	144249055	5843
ENSMUSG00000001524	protein_coding	Gtf2h4	ENSMUST00000159852	protein_coding		17	-1	35673659	331
ENSMUSG00000067006	protein_coding	Serpinb5	ENSMUST00000086701	protein_coding	principal1	1	1	106861173	2572
ENSMUSG00000034724	protein_coding	Cnot6l	ENSMUST00000137207	protein_coding		5	-1	96164171	421
ENSMUSG00000034724	protein_coding	Cnot6l	ENSMUST00000154500	protein_coding		5	-1	96161763	232
ENSMUSG00000021898	protein_coding	Asb14	ENSMUST00000239004	protein_coding		14	1	26894602	1817
ENSMUSG00000090572	protein_coding	Vmn2r109	ENSMUST00000167093	protein_coding	principal1	17	-1	20564756	3125
ENSMUSG00000091556	protein_coding	Gm14569	ENSMUST00000140106	processed_transcript		X	-1	36426680	698
ENSMUSG00000021898	protein_coding	Asb14	ENSMUST00000167365	processed_transcript		14	1	26894612	709
ENSMUSG00000091556	protein_coding	Gm14569	ENSMUST00000148691	processed_transcript		X	-1	36429323	710
ENSMUSG00000091556	protein_coding	Gm14569	ENSMUST00000169499	protein_coding	principal1	X	-1	36491830	5181
ENSMUSG00000075551	protein_coding	Cyp3a41a	ENSMUST00000094111	protein_coding	principal1	5	-1	145720136	2060
ENSMUSG00000034724	protein_coding	Cnot6l	ENSMUST00000113005	protein_coding	alternative1	5	-1	96161755	3170
ENSMUSG00000044066	protein_coding	Cep68	ENSMUST00000050611	protein_coding	principal2	11	-1	20249418	4804
ENSMUSG00000067006	protein_coding	Serpinb5	ENSMUST00000188745	protein_coding		1	1	106861174	654
ENSMUSG00000026358	protein_coding	Rgs1	ENSMUST00000167317	nonsense_mediated_decay		1	-1	144249059	2323
ENSMUSG00000021898	protein_coding	Asb14	ENSMUST00000167929	nonsense_mediated_decay		14	1	26894620	650
ENSMUSG00000091556	protein_coding	Gm14569	ENSMUST00000167210	processed_transcript		X	-1	36484339	520
ENSMUSG00000105661	processed_pseudogene	Gm43626	ENSMUST00000198575	processed_pseudogene		5	1	145760545	162
ENSMUSG00000067006	protein_coding	Serpinb5	ENSMUST00000112730	protein_coding	principal1	1	1	106861203	2672
ENSMUSG00000071650	protein_coding	Ganab	ENSMUST00000236563	processed_transcript		19	1	8898071	808
ENSMUSG00000045013	protein_coding	Olfr711	ENSMUST00000051715	protein_coding	principal1	7	-1	106975453	3035
ENSMUSG00000021898	protein_coding	Asb14	ENSMUST00000165305	nonsense_mediated_decay		14	1	26903243	1432
ENSMUSG00000045013	protein_coding	Olfr711	ENSMUST00000207200	protein_coding	principal1	7	-1	106975453	2966
ENSMUSG00000067006	protein_coding	Serpinb5	ENSMUST00000112729	protein_coding	principal1	1	1	106870234	2531
ENSMUSG00000044066	protein_coding	Cep68	ENSMUST00000109596	protein_coding	alternative2	11	-1	20249418	2171
ENSMUSG00000028029	protein_coding	Aimp1	ENSMUST00000198513	protein_coding	alternative2	3	-1	132684122	1146
ENSMUSG00000026358	protein_coding	Rgs1	ENSMUST00000172388	nonsense_mediated_decay		1	-1	144249059	1870
ENSMUSG00000045013	protein_coding	Olfr711	ENSMUST00000216335	protein_coding	principal1	7	-1	106975453	4724
ENSMUSG00000026358	protein_coding	Rgs1	ENSMUST00000167812	nonsense_mediated_decay		1	-1	144249027	2803
ENSMUSG00000044066	protein_coding	Cep68	ENSMUST00000162811	protein_coding	alternative2	11	-1	20249429	2788
ENSMUSG00000044066	protein_coding	Cep68	ENSMUST00000161218	retained_intron		11	-1	20249383	793
ENSMUSG00000026358	protein_coding	Rgs1	ENSMUST00000169409	nonsense_mediated_decay		1	-1	144249057	1328
ENSMUSG00000021898	protein_coding	Asb14	ENSMUST00000090337	protein_coding	principal2	14	1	26894604	2015
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000005234	protein_coding	principal1	5	-1	38561806	3089
ENSMUSG00000021898	protein_coding	Asb14	ENSMUST00000165929	protein_coding		14	1	26894604	1815
ENSMUSG00000035775	protein_coding	Krt20	ENSMUST00000017743	protein_coding	principal1	11	-1	99438150	1927
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000038614	protein_coding	principal1	7	1	126776955	973
ENSMUSG00000026358	protein_coding	Rgs1	ENSMUST00000185714	protein_coding		1	-1	144249058	409
ENSMUSG00000091947	processed_transcript	6530401F13Rik	ENSMUST00000166971	processed_transcript		12	1	81532968	1090
ENSMUSG00000026358	protein_coding	Rgs1	ENSMUST00000189916	retained_intron		1	-1	144249057	333
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000074352	protein_coding	principal1	18	-1	12941841	3956
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000200909	retained_intron		5	-1	38530126	833
ENSMUSG00000028029	protein_coding	Aimp1	ENSMUST00000029663	protein_coding	principal2	3	-1	132683884	1126
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000106359	protein_coding		7	1	126776978	469
ENSMUSG00000072972	protein_coding	Adam4	ENSMUST00000085319	protein_coding	principal1	12	-1	81421946	2504
ENSMUSG00000086272	antisense	BC039966	ENSMUST00000141582	antisense		4	-1	153950503	1371
ENSMUSG00000091259	protein_coding	Vmn2r110	ENSMUST00000169559	protein_coding	principal2	17	-1	20596423	8810
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000156891	processed_transcript		7	1	126776999	409
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000234118	protein_coding		18	-1	12854459	2494
ENSMUSG00000028029	protein_coding	Aimp1	ENSMUST00000197646	retained_intron		3	-1	132674776	598
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000201260	protein_coding		5	-1	38561635	2139
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000234194	protein_coding		18	-1	12855264	2489
ENSMUSG00000026358	protein_coding	Rgs1	ENSMUST00000169042	retained_intron		1	-1	144249060	414
ENSMUSG00000091259	protein_coding	Vmn2r110	ENSMUST00000232904	nonsense_mediated_decay		17	-1	20596423	9104
ENSMUSG00000072974	protein_coding	Gm4787	ENSMUST00000062182	protein_coding	principal1	12	-1	81379464	2474
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000235027	protein_coding		18	-1	12861205	2531
ENSMUSG00000091259	protein_coding	Vmn2r110	ENSMUST00000233022	protein_coding	alternative2	17	-1	20596423	8747
ENSMUSG00000028029	protein_coding	Aimp1	ENSMUST00000200025	retained_intron		3	-1	132677239	656
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000201059	retained_intron		5	-1	38530014	682
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000206143	processed_transcript		7	1	126776999	829
ENSMUSG00000091259	protein_coding	Vmn2r110	ENSMUST00000233630	nonsense_mediated_decay		17	-1	20596423	9041
ENSMUSG00000028029	protein_coding	Aimp1	ENSMUST00000197793	protein_coding		3	-1	132684370	535
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000201538	retained_intron		5	-1	38529850	554
ENSMUSG00000071273	processed_pseudogene	Gm5145	ENSMUST00000095633	processed_pseudogene		17	1	20570369	830
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000106357	protein_coding	principal1	7	1	126777001	1594
ENSMUSG00000028029	protein_coding	Aimp1	ENSMUST00000196206	protein_coding		3	-1	132683837	435
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000202496	processed_transcript		5	-1	38531996	316
ENSMUSG00000006373	protein_coding	Pgrmc1	ENSMUST00000073339	protein_coding	principal1	X	1	36598206	1857
ENSMUSG00000096372	protein_coding	Gm8138	ENSMUST00000169473	protein_coding	principal1	14	-1	43416350	1404
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000121888	protein_coding		18	-1	12862423	2674
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000145762	protein_coding		7	1	126777005	574
ENSMUSG00000028029	protein_coding	Aimp1	ENSMUST00000196963	protein_coding		3	-1	132684124	275
ENSMUSG00000115511	unprocessed_pseudogene	Gm49072	ENSMUST00000226177	unprocessed_pseudogene		14	-1	43501007	374
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000118313	protein_coding		18	-1	12862713	2893
ENSMUSG00000114986	unprocessed_pseudogene	Gm21162	ENSMUST00000228267	unprocessed_pseudogene		14	-1	43517207	672
ENSMUSG00000028029	protein_coding	Aimp1	ENSMUST00000199638	retained_intron		3	-1	132683836	3958
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000132643	protein_coding		7	1	126777147	161
ENSMUSG00000054417	protein_coding	Cyp3a44	ENSMUST00000067479	protein_coding	principal1	5	-1	145805874	1962
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000117361	protein_coding		18	-1	12863380	2687
ENSMUSG00000031519	protein_coding	Asb5	ENSMUST00000033918	protein_coding	principal1	8	1	54550331	1585
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000234871	protein_coding		18	-1	12863440	2818
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000106356	protein_coding	principal1	7	1	126777213	785
ENSMUSG00000001569	protein_coding	Nom1	ENSMUST00000001611	protein_coding	principal1	5	1	29434664	9219
ENSMUSG00000031519	protein_coding	Asb5	ENSMUST00000239166	protein_coding		8	1	54571411	1633
ENSMUSG00000031519	protein_coding	Asb5	ENSMUST00000239106	protein_coding		8	1	54571426	1421
ENSMUSG00000031519	protein_coding	Asb5	ENSMUST00000239152	protein_coding		8	1	54571426	1393
ENSMUSG00000106473	unprocessed_pseudogene	Gm19089	ENSMUST00000197207	unprocessed_pseudogene		5	1	145818761	613
ENSMUSG00000091477	protein_coding	Gm5799	ENSMUST00000169023	protein_coding	principal1	14	1	43543576	1314
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000201150	retained_intron		5	-1	38561550	1886
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000150760	processed_transcript		7	1	126777508	760
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000202766	processed_transcript		5	-1	38563221	673
ENSMUSG00000090332	unprocessed_pseudogene	Gm3216	ENSMUST00000166927	unprocessed_pseudogene		14	-1	43564547	486
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000201456	retained_intron		5	-1	38561806	659
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000143078	retained_intron		7	1	126777581	613
ENSMUSG00000001569	protein_coding	Nom1	ENSMUST00000146347	retained_intron		5	1	29441318	531
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000202199	retained_intron		5	-1	38561543	3909
ENSMUSG00000005103	protein_coding	Wdr1	ENSMUST00000201330	retained_intron		5	-1	38561575	353
ENSMUSG00000042675	protein_coding	Ypel3	ENSMUST00000170882	protein_coding	principal1	7	1	126776975	1050
ENSMUSG00000022336	protein_coding	Eif3e	ENSMUST00000022960	protein_coding	principal1	15	-1	43282719	1506
ENSMUSG00000104742	IG_V_pseudogene	Igkv9-128	ENSMUST00000196602	IG_V_pseudogene		6	1	67847409	353
ENSMUSG00000110312	lincRNA	Gm45368	ENSMUST00000210944	lincRNA		8	-1	37350753	416
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000234428	nonsense_mediated_decay		18	-1	12819598	2317
ENSMUSG00000110312	lincRNA	Gm45368	ENSMUST00000209323	lincRNA		8	-1	37350748	703
ENSMUSG00000061482	protein_coding	H4c4	ENSMUST00000102968	protein_coding	principal1	13	1	23581598	1138
ENSMUSG00000104140	TEC	Gm37140	ENSMUST00000192914	TEC		1	-1	97880065	1684
ENSMUSG00000051769	protein_coding	Wfdc15a	ENSMUST00000063251	protein_coding	principal1	2	-1	164200130	488
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000121774	protein_coding		18	-1	12862914	2931
ENSMUSG00000089782	processed_pseudogene	Gm3531	ENSMUST00000162698	processed_pseudogene		1	-1	97949389	489
ENSMUSG00000001065	protein_coding	Zfp276	ENSMUST00000001092	protein_coding	principal1	8	1	123254195	4071
ENSMUSG00000114111	processed_pseudogene	Gm9321	ENSMUST00000221179	processed_pseudogene		12	-1	25820541	778
ENSMUSG00000026271	protein_coding	Gpr35	ENSMUST00000185421	protein_coding		1	1	92950865	246
ENSMUSG00000076508	IG_V_gene	Igkv17-127	ENSMUST00000200586	IG_V_gene	principal5	6	1	67861153	359
ENSMUSG00000023802	protein_coding	Nox3	ENSMUST00000115800	protein_coding	principal1	17	-1	3696261	1792
ENSMUSG00000113827	lincRNA	Gm47733	ENSMUST00000221959	lincRNA		12	1	25871153	264
ENSMUSG00000076508	IG_V_gene	Igkv17-127	ENSMUST00000103309	IG_V_gene	alternative2	6	1	67861159	341
ENSMUSG00000031642	protein_coding	Sh3rf1	ENSMUST00000034060	protein_coding	principal1	8	1	61223872	5479
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000119043	protein_coding		18	-1	12819907	2522
ENSMUSG00000026271	protein_coding	Gpr35	ENSMUST00000189697	protein_coding		1	1	92956164	698
ENSMUSG00000111648	processed_pseudogene	Gm46103	ENSMUST00000217614	processed_pseudogene		9	1	10475935	341
ENSMUSG00000085059	lincRNA	Gm11750	ENSMUST00000146016	lincRNA		11	1	118791372	583
ENSMUSG00000031518	protein_coding	Spata4	ENSMUST00000033917	protein_coding	principal1	8	1	54600781	1057
ENSMUSG00000031642	protein_coding	Sh3rf1	ENSMUST00000209611	protein_coding		8	1	61224244	4416
ENSMUSG00000109590	antisense	Gm32710	ENSMUST00000210677	antisense		9	1	10904345	618
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000119512	protein_coding		18	-1	12879977	1947
ENSMUSG00000086732	lincRNA	Gm6117	ENSMUST00000150540	lincRNA		6	1	31574967	1333
ENSMUSG00000001065	protein_coding	Zfp276	ENSMUST00000150356	retained_intron		8	1	123254271	2222
ENSMUSG00000022336	protein_coding	Eif3e	ENSMUST00000228892	retained_intron		15	-1	43279782	2633
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000145777	retained_intron		18	-1	12767137	669
ENSMUSG00000085539	antisense	Gm15561	ENSMUST00000124326	antisense		12	-1	69273432	540
ENSMUSG00000031642	protein_coding	Sh3rf1	ENSMUST00000210210	processed_transcript		8	1	61361589	590
ENSMUSG00000022336	protein_coding	Eif3e	ENSMUST00000226281	retained_intron		15	-1	43268487	4123
ENSMUSG00000109610	processed_pseudogene	Gm7432	ENSMUST00000210343	processed_pseudogene		8	-1	61381387	879
ENSMUSG00000022336	protein_coding	Eif3e	ENSMUST00000226415	processed_transcript		15	-1	43282626	717
ENSMUSG00000051890	protein_coding	Klhdc1	ENSMUST00000146389	processed_transcript		12	1	69241176	332
ENSMUSG00000026271	protein_coding	Gpr35	ENSMUST00000186298	protein_coding	principal1	1	1	92973122	2647
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000124570	protein_coding		18	-1	12860251	1368
ENSMUSG00000056943	processed_pseudogene	Gm10015	ENSMUST00000072570	processed_pseudogene		8	-1	61364483	465
ENSMUSG00000018211	protein_coding	Wfdc15b	ENSMUST00000018355	protein_coding	principal1	2	-1	164221631	510
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000234427	protein_coding		18	-1	12862240	917
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000143077	protein_coding		18	-1	12863291	798
ENSMUSG00000026271	protein_coding	Gpr35	ENSMUST00000027489	protein_coding		1	1	92973122	3270
ENSMUSG00000018211	protein_coding	Wfdc15b	ENSMUST00000109376	protein_coding	principal1	2	-1	164221660	571
ENSMUSG00000026271	protein_coding	Gpr35	ENSMUST00000064480	protein_coding	principal1	1	1	92975347	3409
ENSMUSG00000112849	processed_pseudogene	Gm18040	ENSMUST00000217922	processed_pseudogene		10	-1	107059349	827
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000154614	retained_intron		18	-1	12889046	936
ENSMUSG00000108029	unprocessed_pseudogene	Olfr1556-ps1	ENSMUST00000204688	unprocessed_pseudogene		10	1	106502737	466
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000159041	protein_coding		1	-1	97840811	709
ENSMUSG00000020893	protein_coding	Per1	ENSMUST00000101004	protein_coding		11	1	69095217	3507
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000155650	protein_coding		18	-1	12869107	602
ENSMUSG00000112443	processed_pseudogene	Gm19007	ENSMUST00000217746	processed_pseudogene		10	1	106949297	874
ENSMUSG00000018211	protein_coding	Wfdc15b	ENSMUST00000164567	protein_coding	principal1	2	-1	164215583	497
ENSMUSG00000020260	protein_coding	Pofut2	ENSMUST00000020493	protein_coding	principal1	10	1	77259218	2290
ENSMUSG00000026271	protein_coding	Gpr35	ENSMUST00000169198	protein_coding	principal1	1	1	92978922	4214
ENSMUSG00000082140	processed_pseudogene	Gm13094	ENSMUST00000117930	processed_pseudogene		4	1	150228035	409
ENSMUSG00000103449	lincRNA	Gm37134	ENSMUST00000195810	lincRNA		1	1	186177338	628
ENSMUSG00000001065	protein_coding	Zfp276	ENSMUST00000156896	retained_intron		8	1	123254284	4111
ENSMUSG00000001065	protein_coding	Zfp276	ENSMUST00000154450	protein_coding		8	1	123254686	729
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000165754	protein_coding		9	-1	123717625	6541
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000098258	protein_coding		9	-1	123712624	3741
ENSMUSG00000102790	TEC	Gm37272	ENSMUST00000193401	TEC		1	1	186182257	488
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000068045	protein_coding	principal2	7	-1	28962340	3877
ENSMUSG00000020260	protein_coding	Pofut2	ENSMUST00000217993	retained_intron		10	1	77259318	7010
ENSMUSG00000100021	processed_pseudogene	Gm18697	ENSMUST00000191179	processed_pseudogene		1	-1	93002771	2126
ENSMUSG00000001065	protein_coding	Zfp276	ENSMUST00000211828	processed_transcript		8	1	123255975	156
ENSMUSG00000102217	TEC	Gm37491	ENSMUST00000192552	TEC		1	1	186347315	1111
ENSMUSG00000001065	protein_coding	Zfp276	ENSMUST00000146158	retained_intron		8	1	123258328	1010
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000132594	retained_intron		18	-1	12941841	2353
ENSMUSG00000020260	protein_coding	Pofut2	ENSMUST00000218064	nonsense_mediated_decay		10	1	77262447	763
ENSMUSG00000001065	protein_coding	Zfp276	ENSMUST00000147312	retained_intron		8	1	123259460	676
ENSMUSG00000020260	protein_coding	Pofut2	ENSMUST00000219376	protein_coding		10	1	77262448	629
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000122175	protein_coding		18	-1	12941777	1203
ENSMUSG00000001065	protein_coding	Zfp276	ENSMUST00000130333	retained_intron		8	1	123264821	755
ENSMUSG00000020260	protein_coding	Pofut2	ENSMUST00000218672	retained_intron		10	1	77265331	756
ENSMUSG00000040811	protein_coding	Eml2	ENSMUST00000117338	protein_coding		7	1	19176421	2765
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000147197	nonsense_mediated_decay		18	-1	12941806	803
ENSMUSG00000020260	protein_coding	Pofut2	ENSMUST00000218117	protein_coding		10	1	77266917	558
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000141651	retained_intron		18	-1	12941792	681
ENSMUSG00000015016	protein_coding	Acsf3	ENSMUST00000212903	processed_transcript		8	1	122775486	1798
ENSMUSG00000040811	protein_coding	Eml2	ENSMUST00000120595	protein_coding	principal1	7	1	19181170	2255
ENSMUSG00000044252	protein_coding	Osbpl1a	ENSMUST00000142467	protein_coding		18	-1	12941789	363
ENSMUSG00000078444	bidirectional_promoter_lncRNA	Gm10941	ENSMUST00000105408	bidirectional_promoter_lncRNA		10	-1	77259223	708
ENSMUSG00000083564	processed_pseudogene	Gm11929	ENSMUST00000118175	processed_pseudogene		4	1	32207148	945
ENSMUSG00000040811	protein_coding	Eml2	ENSMUST00000148246	nonsense_mediated_decay		7	1	19181181	2074
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000166097	nonsense_mediated_decay		9	-1	123717528	4105
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000144909	processed_transcript		7	-1	28907385	2581
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000217157	protein_coding	alternative1	7	-1	28962340	3530
ENSMUSG00000113268	lincRNA	4930477G07Rik	ENSMUST00000220814	lincRNA		12	-1	100097218	809
ENSMUSG00000113268	lincRNA	4930477G07Rik	ENSMUST00000223195	lincRNA		12	-1	100097218	947
ENSMUSG00000112999	processed_pseudogene	9530050K03Rik	ENSMUST00000221663	processed_pseudogene		12	-1	100080817	1299
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000216863	protein_coding		7	-1	28898193	1489
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000129338	retained_intron		7	-1	28894852	508
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000207765	retained_intron		7	-1	28897298	1890
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000143584	retained_intron		7	-1	28897031	750
ENSMUSG00000040811	protein_coding	Eml2	ENSMUST00000048502	protein_coding		7	1	19181204	2275
ENSMUSG00000025197	protein_coding	Cyp2c23	ENSMUST00000026211	protein_coding	principal3	19	-1	44029199	1916
ENSMUSG00000038299	protein_coding	Wdr36	ENSMUST00000053663	protein_coding	principal4	18	1	32837225	4455
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000127210	protein_coding		7	-1	28962223	1594
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000026274	protein_coding	principal1	9	-1	123717625	4070
ENSMUSG00000025197	protein_coding	Cyp2c23	ENSMUST00000211830	protein_coding	alternative2	19	-1	44029208	1557
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000150493	processed_transcript		7	-1	28907686	726
ENSMUSG00000111908	processed_pseudogene	Gm47516	ENSMUST00000219704	processed_pseudogene		10	-1	67348962	160
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000168921	protein_coding		9	-1	123712625	739
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000140622	protein_coding		7	-1	28919221	774
ENSMUSG00000040811	protein_coding	Eml2	ENSMUST00000144054	protein_coding		7	1	19181216	343
ENSMUSG00000054808	protein_coding	Actn4	ENSMUST00000148196	protein_coding		7	-1	28949759	617
ENSMUSG00000112314	lincRNA	Gm49454	ENSMUST00000220398	lincRNA		10	1	67297406	643
ENSMUSG00000040811	protein_coding	Eml2	ENSMUST00000141718	protein_coding		7	1	19181237	596
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000172067	retained_intron		9	-1	123708169	1923
ENSMUSG00000038299	protein_coding	Wdr36	ENSMUST00000234158	retained_intron		18	1	32837253	2330
ENSMUSG00000039488	protein_coding	Cntn5	ENSMUST00000160216	protein_coding	principal1	9	-1	10904775	4192
ENSMUSG00000047180	protein_coding	Neurl3	ENSMUST00000056946	protein_coding	principal1	1	-1	36273435	2598
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000163207	protein_coding		9	-1	123717553	621
ENSMUSG00000002308	protein_coding	Cd320	ENSMUST00000002379	protein_coding	principal3	17	1	33843091	2209
ENSMUSG00000073794	protein_coding	I0C0044D17Rik	ENSMUST00000097964	protein_coding	principal1	4	-1	98823840	2264
ENSMUSG00000073794	protein_coding	I0C0044D17Rik	ENSMUST00000168045	protein_coding	principal1	4	-1	98820324	510
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000217171	retained_intron		9	-1	123712352	1815
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000214521	retained_intron		9	-1	123717697	639
ENSMUSG00000015016	protein_coding	Acsf3	ENSMUST00000212781	protein_coding	alternative2	8	1	122775520	2604
ENSMUSG00000039488	protein_coding	Cntn5	ENSMUST00000162484	protein_coding		9	-1	10904726	3606
ENSMUSG00000040811	protein_coding	Eml2	ENSMUST00000141792	processed_transcript		7	1	19181332	493
ENSMUSG00000002308	protein_coding	Cd320	ENSMUST00000173418	retained_intron		17	1	33843103	492
ENSMUSG00000039488	protein_coding	Cntn5	ENSMUST00000160358	retained_intron		9	-1	10904449	402
ENSMUSG00000039488	protein_coding	Cntn5	ENSMUST00000074133	protein_coding	principal1	9	-1	10419090	3297
ENSMUSG00000002308	protein_coding	Cd320	ENSMUST00000234506	retained_intron		17	1	33843153	1417
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000168923	processed_transcript		9	-1	123717547	396
ENSMUSG00000039488	protein_coding	Cntn5	ENSMUST00000179049	protein_coding		9	-1	10419090	2682
ENSMUSG00000038299	protein_coding	Wdr36	ENSMUST00000166214	protein_coding	alternative2	18	1	32837311	2906
ENSMUSG00000040811	protein_coding	Eml2	ENSMUST00000146095	retained_intron		7	1	19181606	593
ENSMUSG00000111209	processed_pseudogene	Gm7529	ENSMUST00000213753	processed_pseudogene		9	1	10734640	1897
ENSMUSG00000047180	protein_coding	Neurl3	ENSMUST00000188666	protein_coding		1	-1	36274679	1206
ENSMUSG00000015016	protein_coding	Acsf3	ENSMUST00000212790	protein_coding	principal2	8	1	122775578	2171
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000166184	processed_transcript		9	-1	123717549	445
ENSMUSG00000002308	protein_coding	Cd320	ENSMUST00000087559	protein_coding	alternative2	17	1	33843426	1191
ENSMUSG00000038299	protein_coding	Wdr36	ENSMUST00000234434	retained_intron		18	1	32837322	2666
ENSMUSG00000025245	protein_coding	Lztfl1	ENSMUST00000165799	retained_intron		9	-1	123717582	596
ENSMUSG00000015016	protein_coding	Acsf3	ENSMUST00000015160	protein_coding	principal2	8	1	122775505	2206
ENSMUSG00000038299	protein_coding	Wdr36	ENSMUST00000234798	retained_intron		18	1	32853107	3063
ENSMUSG00000043284	protein_coding	Tmem11	ENSMUST00000062677	protein_coding	principal1	11	-1	60879272	1457
ENSMUSG00000091803	protein_coding	Cox16	ENSMUST00000110340	protein_coding		12	-1	81485110	668
ENSMUSG00000095743	protein_coding	Gm17654	ENSMUST00000166110	protein_coding	principal1	14	-1	43579146	1403
ENSMUSG00000031822	protein_coding	Gse1	ENSMUST00000180448	protein_coding		8	1	120228456	2504
ENSMUSG00000091803	protein_coding	Cox16	ENSMUST00000166723	protein_coding		12	-1	81485073	579
ENSMUSG00000090681	unprocessed_pseudogene	Gm3221	ENSMUST00000164869	unprocessed_pseudogene		14	-1	43595276	440
ENSMUSG00000043284	protein_coding	Tmem11	ENSMUST00000155031	protein_coding		11	-1	60878787	725
ENSMUSG00000043284	protein_coding	Tmem11	ENSMUST00000168218	protein_coding		11	-1	60879038	1511
ENSMUSG00000084188	processed_pseudogene	Gm12851	ENSMUST00000117920	processed_pseudogene		4	1	98855614	421
ENSMUSG00000112848	lincRNA	Gm32023	ENSMUST00000220168	lincRNA		10	1	67423994	661
ENSMUSG00000112726	lincRNA	Gm47531	ENSMUST00000219056	lincRNA		10	-1	67443429	426
ENSMUSG00000091803	protein_coding	Cox16	ENSMUST00000002757	protein_coding	principal1	12	-1	81485120	2007
ENSMUSG00000029530	protein_coding	Ccr9	ENSMUST00000163559	protein_coding	principal1	9	1	123678439	3004
ENSMUSG00000112120	lincRNA	Gm32255	ENSMUST00000219456	lincRNA		10	-1	67497707	1349
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000173199	protein_coding	alternative1	12	1	3572381	2820
ENSMUSG00000029530	protein_coding	Ccr9	ENSMUST00000215921	retained_intron		9	1	123767169	4811
ENSMUSG00000051890	protein_coding	Klhdc1	ENSMUST00000063445	protein_coding	principal1	12	1	69241832	2620
ENSMUSG00000051890	protein_coding	Klhdc1	ENSMUST00000127791	processed_transcript		12	1	69241914	228
ENSMUSG00000039057	protein_coding	Myo16	ENSMUST00000208309	protein_coding		8	1	10153911	2462
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000164578	protein_coding		12	1	3572391	2355
ENSMUSG00000051890	protein_coding	Klhdc1	ENSMUST00000173419	nonsense_mediated_decay		12	1	69241918	1404
ENSMUSG00000091803	protein_coding	Cox16	ENSMUST00000171237	processed_transcript		12	-1	81484829	458
ENSMUSG00000034107	protein_coding	Ano7	ENSMUST00000058682	protein_coding	alternative2	1	1	93373930	2963
ENSMUSG00000029530	protein_coding	Ccr9	ENSMUST00000166236	protein_coding	principal1	9	1	123767211	5197
ENSMUSG00000110415	processed_pseudogene	Gm6203	ENSMUST00000209575	processed_pseudogene		8	-1	37373165	1342
ENSMUSG00000035150	protein_coding	Eif2s3x	ENSMUST00000050328	protein_coding	principal1	X	-1	94212709	3647
ENSMUSG00000054083	protein_coding	Capn12	ENSMUST00000066880	protein_coding	principal1	7	1	28881422	3040
ENSMUSG00000091803	protein_coding	Cox16	ENSMUST00000168463	protein_coding		12	-1	81485113	431
ENSMUSG00000029530	protein_coding	Ccr9	ENSMUST00000111454	protein_coding		9	1	123767227	2620
ENSMUSG00000035150	protein_coding	Eif2s3x	ENSMUST00000113922	protein_coding		X	-1	94212651	1103
ENSMUSG00000034107	protein_coding	Ano7	ENSMUST00000186641	protein_coding	principal3	1	1	93373930	3984
ENSMUSG00000091803	protein_coding	Cox16	ENSMUST00000163282	processed_transcript		12	-1	81484851	298
ENSMUSG00000020893	protein_coding	Per1	ENSMUST00000021271	protein_coding	principal2	11	1	69098948	4671
ENSMUSG00000033454	protein_coding	Zbtb1	ENSMUST00000042779	protein_coding	principal1	12	1	76370266	12190
ENSMUSG00000091803	protein_coding	Cox16	ENSMUST00000167819	processed_transcript		12	-1	81485127	681
ENSMUSG00000091803	protein_coding	Cox16	ENSMUST00000169124	protein_coding		12	-1	81485114	685
ENSMUSG00000034107	protein_coding	Ano7	ENSMUST00000190340	protein_coding		1	1	93401861	755
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000058762	protein_coding	alternative2	1	-1	98095621	4095
ENSMUSG00000029530	protein_coding	Ccr9	ENSMUST00000168910	protein_coding	principal1	9	1	123767229	2888
ENSMUSG00000020893	protein_coding	Per1	ENSMUST00000132462	protein_coding		11	1	69100152	496
ENSMUSG00000035150	protein_coding	Eif2s3x	ENSMUST00000127963	processed_transcript		X	-1	94212862	729
ENSMUSG00000091803	protein_coding	Cox16	ENSMUST00000169912	retained_intron		12	-1	81485085	1150
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000161567	protein_coding	alternative2	1	-1	97977255	3630
ENSMUSG00000063894	protein_coding	Zkscan8	ENSMUST00000045228	protein_coding	principal2	13	-1	21531120	8805
ENSMUSG00000103690	lincRNA	A730004F24Rik	ENSMUST00000193084	lincRNA		1	-1	186558472	1161
ENSMUSG00000020893	protein_coding	Per1	ENSMUST00000142392	nonsense_mediated_decay		11	1	69100509	2972
ENSMUSG00000091587	processed_transcript	Gm17191	ENSMUST00000165200	processed_transcript		12	-1	81533358	417
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000162681	protein_coding		1	-1	97840389	657
ENSMUSG00000029530	protein_coding	Ccr9	ENSMUST00000180093	protein_coding	principal1	9	1	123774540	4239
ENSMUSG00000103690	lincRNA	A730004F24Rik	ENSMUST00000195454	lincRNA		1	-1	186558681	1704
ENSMUSG00000020893	protein_coding	Per1	ENSMUST00000102605	protein_coding	alternative2	11	1	69100522	4537
ENSMUSG00000099478	antisense	Gm28370	ENSMUST00000185303	antisense		12	1	81492199	3375
ENSMUSG00000063894	protein_coding	Zkscan8	ENSMUST00000224362	protein_coding	alternative2	13	-1	21527022	6954
ENSMUSG00000063894	protein_coding	Zkscan8	ENSMUST00000156674	protein_coding		13	-1	21531032	928
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000159585	retained_intron		1	-1	97834647	560
ENSMUSG00000054083	protein_coding	Capn12	ENSMUST00000208238	retained_intron		7	1	28888972	385
ENSMUSG00000056035	protein_coding	Cyp3a11	ENSMUST00000035918	protein_coding	principal1	5	-1	145879964	2344
ENSMUSG00000117869	processed_transcript	Snhg4	ENSMUST00000235679	lincRNA		18	1	35553371	1190
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000160210	processed_transcript		1	-1	97825985	415
ENSMUSG00000117869	processed_transcript	Snhg4	ENSMUST00000235750	retained_intron		18	1	35553408	1676
ENSMUSG00000009731	protein_coding	Kcnd1	ENSMUST00000009875	protein_coding	principal1	X	1	7822289	5287
ENSMUSG00000054083	protein_coding	Capn12	ENSMUST00000208299	retained_intron		7	1	28890952	2445
ENSMUSG00000063894	protein_coding	Zkscan8	ENSMUST00000110481	protein_coding		13	-1	21531073	728
ENSMUSG00000117869	processed_transcript	Snhg4	ENSMUST00000235956	retained_intron		18	1	35553410	1355
ENSMUSG00000020893	protein_coding	Per1	ENSMUST00000166748	protein_coding	principal2	11	1	69100158	4636
ENSMUSG00000056035	protein_coding	Cyp3a11	ENSMUST00000199857	retained_intron		5	-1	145876691	2802
ENSMUSG00000117869	processed_transcript	Snhg4	ENSMUST00000237021	retained_intron		18	1	35553412	708
ENSMUSG00000116600	lincRNA	Gm49707	ENSMUST00000232436	lincRNA		16	1	90314872	1447
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000162803	retained_intron		1	-1	97840881	1045
ENSMUSG00000116600	lincRNA	Gm49707	ENSMUST00000232142	lincRNA		16	1	90314880	1340
ENSMUSG00000109307	antisense	Gm44700	ENSMUST00000208228	antisense		7	-1	28888483	846
ENSMUSG00000109314	sense_intronic	Gm44699	ENSMUST00000208229	sense_intronic		7	-1	28943528	5083
ENSMUSG00000018931	protein_coding	Natd1	ENSMUST00000019075	protein_coding	principal1	11	-1	60913812	4179
ENSMUSG00000117869	processed_transcript	Snhg4	ENSMUST00000235277	retained_intron		18	1	35553422	1586
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000159131	retained_intron		1	-1	97840391	659
ENSMUSG00000048521	protein_coding	Cxcr6	ENSMUST00000049810	protein_coding	principal2	9	1	123806475	1897
ENSMUSG00000117869	processed_transcript	Snhg4	ENSMUST00000235976	retained_intron		18	1	35556139	613
ENSMUSG00000116989	lincRNA	Gm49709	ENSMUST00000231361	lincRNA		16	1	90349417	498
ENSMUSG00000116656	processed_transcript	Gm49708	ENSMUST00000231663	lincRNA		16	-1	90349642	1236
ENSMUSG00000009731	protein_coding	Kcnd1	ENSMUST00000125440	processed_transcript		X	1	7822307	751
ENSMUSG00000116656	processed_transcript	Gm49708	ENSMUST00000231405	retained_intron		16	-1	90349642	918
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000161071	retained_intron		1	-1	97864464	570
ENSMUSG00000118030	antisense	Gm50163	ENSMUST00000237282	antisense		18	-1	35598573	363
ENSMUSG00000085561	lincRNA	1700046C09Rik	ENSMUST00000139973	lincRNA		11	-1	14599225	543
ENSMUSG00000035948	protein_coding	Acss3	ENSMUST00000165067	protein_coding	principal1	10	-1	107123583	4696
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000159841	protein_coding		1	-1	97894396	560
ENSMUSG00000102496	TEC	Gm36989	ENSMUST00000193225	TEC		18	1	35574907	2160
ENSMUSG00000116849	lincRNA	Gm49710	ENSMUST00000231427	lincRNA		16	-1	90363117	827
ENSMUSG00000048521	protein_coding	Cxcr6	ENSMUST00000216072	protein_coding	alternative2	9	1	123806499	1907
ENSMUSG00000018931	protein_coding	Natd1	ENSMUST00000143800	processed_transcript		11	-1	60914750	355
ENSMUSG00000058922	processed_pseudogene	Gm10052	ENSMUST00000168019	processed_pseudogene		9	-1	123690192	960
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000235769	retained_intron		18	1	35562138	1567
ENSMUSG00000040132	protein_coding	Svs2	ENSMUST00000044953	protein_coding	principal1	2	-1	164238466	1695
ENSMUSG00000110735	TEC	Gm47173	ENSMUST00000214683	TEC		9	1	123643166	2324
ENSMUSG00000095528	protein_coding	Gm10375	ENSMUST00000163970	transcribed_unprocessed_pseudogene		14	-1	43608013	836
ENSMUSG00000091172	antisense	Gm17120	ENSMUST00000164734	antisense		9	1	123635388	743
ENSMUSG00000095528	protein_coding	Gm10375	ENSMUST00000228350	processed_transcript		14	-1	43608013	833
ENSMUSG00000086854	antisense	Gm13781	ENSMUST00000124153	antisense		6	-1	30576035	492
ENSMUSG00000040132	protein_coding	Svs2	ENSMUST00000109374	protein_coding	principal1	2	-1	164238264	1479
ENSMUSG00000035948	protein_coding	Acss3	ENSMUST00000044668	protein_coding		10	-1	107123668	2494
ENSMUSG00000091149	processed_pseudogene	Gm17020	ENSMUST00000172274	processed_pseudogene		9	1	123762503	274
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000159428	retained_intron		1	-1	97977068	1659
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000021926	protein_coding		13	1	63815240	1592
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000162426	processed_transcript		1	-1	97977244	610
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000186731	retained_intron		1	-1	98057883	3894
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000236860	protein_coding		18	1	35562146	762
ENSMUSG00000030880	protein_coding	Polr3e	ENSMUST00000207481	protein_coding		7	1	120917744	2545
ENSMUSG00000048878	protein_coding	Hexim1	ENSMUST00000053063	protein_coding	principal1	11	1	103116231	3495
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000163007	processed_transcript		1	-1	98095646	1083
ENSMUSG00000035948	protein_coding	Acss3	ENSMUST00000065567	processed_transcript		10	-1	107123649	1803
ENSMUSG00000027601	protein_coding	Mtfr1	ENSMUST00000130806	protein_coding		3	1	19187327	706
ENSMUSG00000112863	processed_pseudogene	Gm19181	ENSMUST00000218891	processed_pseudogene		10	-1	107061983	940
ENSMUSG00000021390	protein_coding	Ogn	ENSMUST00000021822	protein_coding	principal1	13	1	49608046	2566
ENSMUSG00000095528	protein_coding	Gm10375	ENSMUST00000100692	protein_coding	principal1	14	-1	43608013	836
ENSMUSG00000105405	processed_pseudogene	Gm42431	ENSMUST00000196880	processed_pseudogene		5	-1	145918878	323
ENSMUSG00000036875	protein_coding	Dna2	ENSMUST00000131422	protein_coding	principal1	10	1	62947026	4122
ENSMUSG00000115868	processed_pseudogene	Gm2999	ENSMUST00000230974	processed_pseudogene		15	1	71794570	428
ENSMUSG00000104805	unprocessed_pseudogene	Gm43624	ENSMUST00000197368	unprocessed_pseudogene		5	1	145956052	180
ENSMUSG00000026335	protein_coding	Pam	ENSMUST00000097625	protein_coding	principal2	1	-1	98095632	4102
ENSMUSG00000050383	protein_coding	Svs3b	ENSMUST00000063132	protein_coding	principal1	2	-1	164256640	1249
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000173483	nonsense_mediated_decay		12	1	3572417	1781
ENSMUSG00000105394	processed_pseudogene	Gm43115	ENSMUST00000196244	processed_pseudogene		5	1	145968410	160
ENSMUSG00000031641	protein_coding	Cbr4	ENSMUST00000034058	protein_coding	principal1	8	1	61487734	4309
ENSMUSG00000089706	processed_transcript	B230216N24Rik	ENSMUST00000160588	retained_intron		1	-1	98035675	3469
ENSMUSG00000039057	protein_coding	Myo16	ENSMUST00000207477	protein_coding	principal2	8	1	10153968	7169
ENSMUSG00000039057	protein_coding	Myo16	ENSMUST00000214643	protein_coding		8	1	10249288	1130
ENSMUSG00000031641	protein_coding	Cbr4	ENSMUST00000126575	protein_coding		8	1	61487735	528
ENSMUSG00000036875	protein_coding	Dna2	ENSMUST00000092462	nonsense_mediated_decay		10	1	62947075	3651
ENSMUSG00000030880	protein_coding	Polr3e	ENSMUST00000106483	protein_coding	principal1	7	1	120917771	3001
ENSMUSG00000036875	protein_coding	Dna2	ENSMUST00000131715	retained_intron		10	1	62947080	603
ENSMUSG00000030678	protein_coding	Maz	ENSMUST00000205568	protein_coding	principal1	7	-1	127026526	2650
ENSMUSG00000031641	protein_coding	Cbr4	ENSMUST00000156535	retained_intron		8	1	61487755	718
ENSMUSG00000039057	protein_coding	Myo16	ENSMUST00000207204	protein_coding		8	1	10272536	6719
ENSMUSG00000089706	processed_transcript	B230216N24Rik	ENSMUST00000159324	sense_intronic		1	-1	98047759	1140
ENSMUSG00000090935	protein_coding	Synj2bp	ENSMUST00000163402	protein_coding	principal1	12	-1	81532911	4655
ENSMUSG00000039057	protein_coding	Myo16	ENSMUST00000042103	protein_coding	alternative2	8	1	10272572	6725
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000164607	nonsense_mediated_decay		12	1	3572433	2390
ENSMUSG00000089706	processed_transcript	B230216N24Rik	ENSMUST00000161661	sense_intronic		1	-1	98047793	719
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000174479	protein_coding		12	1	3572434	3689
ENSMUSG00000030678	protein_coding	Maz	ENSMUST00000032916	protein_coding		7	-1	127026452	2347
ENSMUSG00000016998	protein_coding	Svs4	ENSMUST00000017142	protein_coding	principal1	2	-1	164278459	731
ENSMUSG00000031641	protein_coding	Cbr4	ENSMUST00000130495	retained_intron		8	1	61487769	2393
ENSMUSG00000089706	processed_transcript	B230216N24Rik	ENSMUST00000159353	sense_intronic		1	-1	98057680	345
ENSMUSG00000021115	protein_coding	Vrk1	ENSMUST00000072040	protein_coding	alternative2	12	1	106010228	1509
ENSMUSG00000036875	protein_coding	Dna2	ENSMUST00000129785	retained_intron		10	1	62947110	3430
ENSMUSG00000031641	protein_coding	Cbr4	ENSMUST00000155442	retained_intron		8	1	61491410	701
ENSMUSG00000089706	processed_transcript	B230216N24Rik	ENSMUST00000187924	retained_intron		1	-1	98047754	1938
ENSMUSG00000113529	bidirectional_promoter_lncRNA	Gm47484	ENSMUST00000222984	bidirectional_promoter_lncRNA		12	-1	84317076	3223
ENSMUSG00000038002	protein_coding	Cramp1l	ENSMUST00000073337	protein_coding	principal1	17	-1	25015230	7519
ENSMUSG00000031641	protein_coding	Cbr4	ENSMUST00000150932	retained_intron		8	1	61494829	731
ENSMUSG00000021115	protein_coding	Vrk1	ENSMUST00000221312	nonsense_mediated_decay		12	1	106010283	2520
ENSMUSG00000038002	protein_coding	Cramp1l	ENSMUST00000233774	protein_coding	principal1	17	-1	25015788	7674
ENSMUSG00000080741	transcribed_unprocessed_pseudogene	Gm11398	ENSMUST00000120330	transcribed_unprocessed_pseudogene		13	-1	23621049	320
ENSMUSG00000090935	protein_coding	Synj2bp	ENSMUST00000164431	protein_coding		12	-1	81532899	3305
ENSMUSG00000038002	protein_coding	Cramp1l	ENSMUST00000233169	protein_coding		17	-1	25015782	694
ENSMUSG00000090935	protein_coding	Synj2bp	ENSMUST00000019829	retained_intron		12	-1	81504962	790
ENSMUSG00000030880	protein_coding	Polr3e	ENSMUST00000033173	protein_coding	principal1	7	1	120917784	4194
ENSMUSG00000030678	protein_coding	Maz	ENSMUST00000206254	protein_coding		7	-1	127027024	2282
ENSMUSG00000036875	protein_coding	Dna2	ENSMUST00000139212	retained_intron		10	1	62965681	2488
ENSMUSG00000090935	protein_coding	Synj2bp	ENSMUST00000114201	protein_coding		12	-1	81511430	1121
ENSMUSG00000030678	protein_coding	Maz	ENSMUST00000205461	protein_coding		7	-1	127026572	796
ENSMUSG00000036875	protein_coding	Dna2	ENSMUST00000137378	retained_intron		10	1	62965976	2085
ENSMUSG00000090381	processed_pseudogene	Gm6158	ENSMUST00000109467	processed_pseudogene		14	1	24069734	904
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000095724	nonsense_mediated_decay		13	1	63815302	5879
ENSMUSG00000030880	protein_coding	Polr3e	ENSMUST00000209014	retained_intron		7	1	120934830	936
ENSMUSG00000030678	protein_coding	Maz	ENSMUST00000206953	retained_intron		7	-1	127025132	548
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000168806	retained_intron		12	1	3572435	3768
ENSMUSG00000114722	lincRNA	Gm31392	ENSMUST00000224007	lincRNA		14	-1	24075908	2700
ENSMUSG00000042549	antisense	Map2k3os	ENSMUST00000123544	antisense		11	-1	60931867	1291
ENSMUSG00000047246	protein_coding	H2bc6	ENSMUST00000091704	protein_coding	principal1	13	-1	23621094	2480
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000173240	protein_coding		12	1	3572453	2218
ENSMUSG00000030678	protein_coding	Maz	ENSMUST00000206291	protein_coding		7	-1	127027037	379
ENSMUSG00000090935	protein_coding	Synj2bp	ENSMUST00000169158	protein_coding		12	-1	81532880	691
ENSMUSG00000097323	lincRNA	4930426I24Rik	ENSMUST00000217797	lincRNA		12	-1	76403982	1232
ENSMUSG00000049246	processed_pseudogene	Hspe1-ps2	ENSMUST00000051437	processed_pseudogene		12	1	81399812	312
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000220311	protein_coding	alternative2	12	1	4593008	6080
ENSMUSG00000097323	lincRNA	4930426I24Rik	ENSMUST00000180709	lincRNA		12	-1	76403654	601
ENSMUSG00000067224	processed_pseudogene	Gm3695	ENSMUST00000087222	processed_pseudogene		12	-1	81373221	1009
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000174639	nonsense_mediated_decay		12	1	3572463	1873
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000174290	nonsense_mediated_decay		12	1	3572465	2157
ENSMUSG00000047246	protein_coding	H2bc6	ENSMUST00000051091	protein_coding	principal1	13	-1	23621124	2506
ENSMUSG00000039070	protein_coding	Cpa4	ENSMUST00000049251	protein_coding	principal1	6	1	30568369	2739
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000173524	processed_transcript		12	1	3572466	1629
ENSMUSG00000047246	protein_coding	H2bc6	ENSMUST00000129312	processed_transcript		13	-1	23621078	2099
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000174663	protein_coding	alternative1	12	1	3572470	2381
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000099277	nonsense_mediated_decay		13	-1	98815194	4979
ENSMUSG00000012076	protein_coding	Brms1l	ENSMUST00000059250	protein_coding	principal1	12	1	55836324	2609
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000173736	protein_coding		12	1	3572475	2175
ENSMUSG00000051627	protein_coding	H1f4	ENSMUST00000062045	protein_coding	principal1	13	-1	23622558	1930
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000101637	nonsense_mediated_decay		12	1	3572523	2428
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000218072	processed_transcript		12	1	4593062	2640
ENSMUSG00000084135	protein_coding	Pom121l12	ENSMUST00000117584	protein_coding	principal1	11	1	14599276	1039
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000173998	protein_coding		12	1	3572536	384
ENSMUSG00000012076	protein_coding	Brms1l	ENSMUST00000217721	processed_transcript		12	1	55836370	368
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000217942	retained_intron		12	1	4613212	319
ENSMUSG00000012076	protein_coding	Brms1l	ENSMUST00000218779	processed_transcript		12	1	55836370	481
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000174109	nonsense_mediated_decay		12	1	3572620	1493
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000219007	protein_coding	principal2	12	1	4613275	4977
ENSMUSG00000012076	protein_coding	Brms1l	ENSMUST00000219419	nonsense_mediated_decay		12	1	55836403	1516
ENSMUSG00000056399	protein_coding	Prss34	ENSMUST00000037453	protein_coding	principal1	17	1	25298394	1220
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000166429	protein_coding	principal3	12	1	82169420	8215
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000077930	protein_coding	principal2	12	1	3572984	2376
ENSMUSG00000047613	protein_coding	A430005L14Rik	ENSMUST00000058393	protein_coding	principal1	4	1	153957237	1098
ENSMUSG00000012076	protein_coding	Brms1l	ENSMUST00000220400	retained_intron		12	1	55836404	511
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000220963	protein_coding	alternative2	12	1	82169446	5907
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000174547	protein_coding		12	1	3589172	2112
ENSMUSG00000012076	protein_coding	Brms1l	ENSMUST00000219337	processed_transcript		12	1	55838870	436
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000172598	protein_coding		12	1	3632922	1585
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000222312	retained_intron		12	1	82169475	1416
ENSMUSG00000047613	protein_coding	A430005L14Rik	ENSMUST00000139967	retained_intron		4	1	153957255	386
ENSMUSG00000020878	protein_coding	Lrrc46	ENSMUST00000021251	protein_coding	principal1	11	-1	97041407	1336
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000222849	retained_intron		12	1	82169476	1831
ENSMUSG00000001566	protein_coding	Mnx1	ENSMUST00000165512	protein_coding	principal2	5	-1	29478470	2245
ENSMUSG00000012076	protein_coding	Brms1l	ENSMUST00000219575	retained_intron		12	1	55844192	594
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000173074	retained_intron		12	1	3686756	664
ENSMUSG00000047613	protein_coding	A430005L14Rik	ENSMUST00000141493	protein_coding		4	1	153957266	541
ENSMUSG00000081860	processed_pseudogene	Gm11533	ENSMUST00000120287	processed_pseudogene		11	1	97037007	477
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000173498	processed_transcript		12	1	3719540	388
ENSMUSG00000021139	protein_coding	Gm20498	ENSMUST00000164386	protein_coding		12	-1	81532905	1043
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000172504	retained_intron		12	1	3749289	715
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000151917	retained_intron		5	-1	65388914	431
ENSMUSG00000047613	protein_coding	A430005L14Rik	ENSMUST00000147826	nonsense_mediated_decay		4	1	153957266	940
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000173542	protein_coding		12	1	3749543	648
ENSMUSG00000021139	protein_coding	Gm20498	ENSMUST00000166664	protein_coding	principal1	12	-1	81532882	2284
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000172735	processed_transcript		12	1	3774315	545
ENSMUSG00000047613	protein_coding	A430005L14Rik	ENSMUST00000133524	processed_transcript		4	1	153957329	464
ENSMUSG00000001566	protein_coding	Mnx1	ENSMUST00000001608	protein_coding	alternative2	5	-1	29478470	2018
ENSMUSG00000021385	protein_coding	Ippk	ENSMUST00000220447	protein_coding	principal1	13	1	49421249	4421
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000174414	retained_intron		12	1	3774525	414
ENSMUSG00000047613	protein_coding	A430005L14Rik	ENSMUST00000128457	retained_intron		4	1	153959792	630
ENSMUSG00000071454	protein_coding	Dtnb	ENSMUST00000174293	retained_intron		12	1	3779548	400
ENSMUSG00000021115	protein_coding	Vrk1	ENSMUST00000085026	protein_coding	principal4	12	1	106010292	3711
ENSMUSG00000113611	processed_pseudogene	Gm47750	ENSMUST00000220612	processed_pseudogene		12	1	26150316	198
ENSMUSG00000036814	protein_coding	Slc6a20a	ENSMUST00000171647	protein_coding		9	-1	123678806	3894
ENSMUSG00000118498	unprocessed_pseudogene	AC163638.1	ENSMUST00000239043	unprocessed_pseudogene		14	-1	24113204	870
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000222298	protein_coding	alternative2	12	1	82170026	6179
ENSMUSG00000047613	protein_coding	A430005L14Rik	ENSMUST00000105645	protein_coding		4	1	153957237	977
ENSMUSG00000092286	antisense	Dtnbos	ENSMUST00000173847	antisense		12	-1	3762146	1662
ENSMUSG00000091079	sense_intronic	Gm17105	ENSMUST00000163715	sense_intronic		14	-1	24243391	652
ENSMUSG00000021139	protein_coding	Gm20498	ENSMUST00000171459	nonsense_mediated_decay		12	-1	81532877	421
ENSMUSG00000113550	lincRNA	Gm29687	ENSMUST00000223022	lincRNA		12	-1	26210505	879
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000222714	protein_coding	principal3	12	1	82256585	6002
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000219832	retained_intron		12	1	4629549	5804
ENSMUSG00000101366	lincRNA	Gm28147	ENSMUST00000187133	lincRNA		Y	1	8412716	621
ENSMUSG00000078182	processed_pseudogene	Gm6083	ENSMUST00000075518	processed_pseudogene		5	1	29538153	357
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000220766	retained_intron		12	1	82342267	2395
ENSMUSG00000101142	unprocessed_pseudogene	Gm28142	ENSMUST00000186899	unprocessed_pseudogene		Y	-1	8499519	698
ENSMUSG00000027601	protein_coding	Mtfr1	ENSMUST00000117529	protein_coding	principal1	3	1	19187329	1896
ENSMUSG00000021385	protein_coding	Ippk	ENSMUST00000220856	nonsense_mediated_decay		13	1	49421278	2894
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000217672	protein_coding		12	1	4634776	5431
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000221169	nonsense_mediated_decay		12	1	82420615	728
ENSMUSG00000021385	protein_coding	Ippk	ENSMUST00000021817	protein_coding		13	1	49421614	2856
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000218985	retained_intron		12	1	4664535	1272
ENSMUSG00000021139	protein_coding	Gm20498	ENSMUST00000170958	processed_transcript		12	-1	81532761	757
ENSMUSG00000085262	processed_transcript	Gm11574	ENSMUST00000139752	processed_transcript		11	-1	97051432	946
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000221327	retained_intron		12	1	82440547	414
ENSMUSG00000021139	protein_coding	Gm20498	ENSMUST00000168961	processed_transcript		12	-1	81532877	714
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000219182	processed_transcript		12	1	4696296	832
ENSMUSG00000027601	protein_coding	Mtfr1	ENSMUST00000119865	protein_coding	principal1	3	1	19187347	1367
ENSMUSG00000042700	protein_coding	Sipa1l1	ENSMUST00000053969	protein_coding	principal3	12	1	82311349	7488
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000218923	processed_transcript		12	1	4696342	751
ENSMUSG00000021139	protein_coding	Gm20498	ENSMUST00000110339	processed_transcript		12	-1	81532877	531
ENSMUSG00000059586	protein_coding	Nsmce2	ENSMUST00000168722	protein_coding		15	1	59374247	2679
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000219308	retained_intron		12	1	4696939	616
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000218084	retained_intron		12	1	4711518	1606
ENSMUSG00000021115	protein_coding	Vrk1	ENSMUST00000021539	protein_coding	alternative2	12	1	106010316	1742
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000218211	retained_intron		12	1	4712349	942
ENSMUSG00000036814	protein_coding	Slc6a20a	ENSMUST00000040960	protein_coding	principal1	9	-1	123678885	2732
ENSMUSG00000087604	antisense	Cdrt4os1	ENSMUST00000153180	antisense		11	-1	63004128	1109
ENSMUSG00000027601	protein_coding	Mtfr1	ENSMUST00000130645	protein_coding	principal1	3	1	19188110	2953
ENSMUSG00000043929	protein_coding	Klhl15	ENSMUST00000113915	protein_coding	principal1	X	1	94235811	6241
ENSMUSG00000006777	protein_coding	Krt23	ENSMUST00000006969	protein_coding	principal1	11	-1	99493137	1565
ENSMUSG00000087604	antisense	Cdrt4os1	ENSMUST00000130177	antisense		11	-1	63004134	2090
ENSMUSG00000021115	protein_coding	Vrk1	ENSMUST00000221485	protein_coding		12	1	106025807	438
ENSMUSG00000020640	protein_coding	Itsn2	ENSMUST00000062580	protein_coding	principal2	12	1	4593008	5987
ENSMUSG00000036814	protein_coding	Slc6a20a	ENSMUST00000170591	protein_coding		9	-1	123678782	722
ENSMUSG00000021115	protein_coding	Vrk1	ENSMUST00000220629	protein_coding	alternative2	12	1	106030717	1777
ENSMUSG00000041235	protein_coding	Chd7	ENSMUST00000170457	retained_intron		4	1	8690406	4953
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000150815	nonsense_mediated_decay		5	-1	65390833	387
ENSMUSG00000091661	sense_overlapping	Gm17021	ENSMUST00000214413	sense_overlapping		9	-1	123791289	2371
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000040340	protein_coding	principal1	13	-1	98815449	5122
ENSMUSG00000091661	sense_overlapping	Gm17021	ENSMUST00000172093	sense_overlapping		9	-1	123790939	462
ENSMUSG00000059586	protein_coding	Nsmce2	ENSMUST00000227173	protein_coding		15	1	59374285	1122
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000156000	protein_coding		X	1	7721973	711
ENSMUSG00000086955	lincRNA	1700021L23Rik	ENSMUST00000153719	lincRNA		4	-1	124311461	726
ENSMUSG00000027601	protein_coding	Mtfr1	ENSMUST00000029129	nonsense_mediated_decay		3	1	19188265	1574
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000041475	protein_coding	principal2	19	-1	38043577	6902
ENSMUSG00000027601	protein_coding	Mtfr1	ENSMUST00000138777	nonsense_mediated_decay		3	1	19188274	568
ENSMUSG00000041235	protein_coding	Chd7	ENSMUST00000127476	protein_coding		4	1	8690470	2381
ENSMUSG00000042200	protein_coding	Cdrt4	ENSMUST00000035854	protein_coding	principal1	11	1	62951193	723
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000225318	retained_intron		13	-1	98735780	2437
ENSMUSG00000090608	lincRNA	Gm17200	ENSMUST00000170214	lincRNA		9	1	123678096	2022
ENSMUSG00000086978	lincRNA	4933435F18Rik	ENSMUST00000154878	lincRNA		4	-1	124332508	2174
ENSMUSG00000027601	protein_coding	Mtfr1	ENSMUST00000132035	protein_coding		3	1	19188314	904
ENSMUSG00000086978	lincRNA	4933435F18Rik	ENSMUST00000125578	lincRNA		4	-1	124332467	694
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000225945	retained_intron		13	-1	98749320	2764
ENSMUSG00000027601	protein_coding	Mtfr1	ENSMUST00000131053	retained_intron		3	1	19211572	764
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000226068	protein_coding	alternative1	19	-1	38043351	6633
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000223634	retained_intron		13	-1	98750301	3221
ENSMUSG00000118206	antisense	Gm50358	ENSMUST00000237007	antisense		19	-1	47602329	2705
ENSMUSG00000059586	protein_coding	Nsmce2	ENSMUST00000079703	protein_coding	principal1	15	1	59374287	1054
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000225435	retained_intron		19	-1	37901503	567
ENSMUSG00000086121	antisense	Gm16068	ENSMUST00000136557	antisense		19	-1	47617106	504
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000225159	protein_coding		19	-1	37967126	4129
ENSMUSG00000043631	protein_coding	Ecm2	ENSMUST00000051504	protein_coding	principal1	13	1	49504810	3596
ENSMUSG00000087244	unprocessed_pseudogene	Gm7284	ENSMUST00000131667	unprocessed_pseudogene		5	1	136997386	944
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000224900	protein_coding		19	-1	37903722	631
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000174267	nonsense_mediated_decay		3	-1	87768948	5471
ENSMUSG00000060509	protein_coding	Xcr1	ENSMUST00000182350	protein_coding	principal1	9	-1	123862029	4453
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000225287	retained_intron		19	-1	37905824	718
ENSMUSG00000027794	protein_coding	Sohlh2	ENSMUST00000029369	protein_coding	principal1	3	1	55182028	2364
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000224580	retained_intron		19	-1	37916905	662
ENSMUSG00000021782	protein_coding	Dlg5	ENSMUST00000166007	protein_coding		14	-1	24146188	2334
ENSMUSG00000111148	processed_pseudogene	Gm2774	ENSMUST00000213650	processed_pseudogene		9	-1	123868973	1165
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000106226	protein_coding	principal3	7	-1	128461672	4451
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000224518	retained_intron		19	-1	37939981	3030
ENSMUSG00000043631	protein_coding	Ecm2	ENSMUST00000222592	retained_intron		13	1	49504869	5614
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000225094	retained_intron		13	-1	98815153	1927
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000224992	protein_coding		13	-1	98815182	2964
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000225840	protein_coding		13	-1	98815208	944
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000224231	processed_transcript		13	-1	98815157	744
ENSMUSG00000048368	protein_coding	Omd	ENSMUST00000221170	protein_coding	principal1	13	1	49582462	2249
ENSMUSG00000022303	protein_coding	Dcstamp	ENSMUST00000226831	processed_transcript		15	1	39745930	409
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000224416	retained_intron		13	-1	98815182	407
ENSMUSG00000025034	protein_coding	Trim8	ENSMUST00000026008	protein_coding	principal1	19	1	46501702	3580
ENSMUSG00000048368	protein_coding	Omd	ENSMUST00000065494	protein_coding	principal1	13	1	49582766	1556
ENSMUSG00000038534	protein_coding	Osbpl7	ENSMUST00000090020	protein_coding	principal5	11	1	97050628	3771
ENSMUSG00000025034	protein_coding	Trim8	ENSMUST00000235934	processed_transcript		19	1	46514660	406
ENSMUSG00000025804	protein_coding	Ccr1	ENSMUST00000026911	protein_coding	principal1	9	-1	123968692	2833
ENSMUSG00000038534	protein_coding	Osbpl7	ENSMUST00000154084	processed_transcript		11	1	97050820	425
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000067821	protein_coding	principal2	13	1	63815303	2743
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000208553	nonsense_mediated_decay		X	1	7721993	801
ENSMUSG00000038534	protein_coding	Osbpl7	ENSMUST00000142399	retained_intron		11	1	97052326	383
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000109403	protein_coding		13	-1	98815449	1523
ENSMUSG00000041685	protein_coding	Fcho2	ENSMUST00000179563	protein_coding		13	-1	98815449	1586
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000144763	protein_coding		13	1	63815334	1820
ENSMUSG00000038534	protein_coding	Osbpl7	ENSMUST00000142406	retained_intron		11	1	97053424	2783
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000223650	processed_transcript		19	-1	38043358	3066
ENSMUSG00000064039	protein_coding	Ccr1l1	ENSMUST00000071404	protein_coding	principal1	9	-1	123978408	1166
ENSMUSG00000114612	TEC	Gm47550	ENSMUST00000225686	TEC		13	1	98732986	1705
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000159957	nonsense_mediated_decay		13	1	63815360	2117
ENSMUSG00000114458	antisense	Gm47551	ENSMUST00000225263	antisense		13	1	98801172	165
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000021925	protein_coding		13	1	63815416	1828
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000226084	retained_intron		19	-1	38043399	3926
ENSMUSG00000038534	protein_coding	Osbpl7	ENSMUST00000143360	retained_intron		11	1	97066883	920
ENSMUSG00000114598	sense_intronic	D130062J10Rik	ENSMUST00000223763	sense_intronic		13	-1	98801410	2800
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000238465	protein_coding	alternative2	13	1	63815475	4614
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000143449	retained_intron		13	1	63819597	2866
ENSMUSG00000038534	protein_coding	Osbpl7	ENSMUST00000168565	protein_coding	alternative2	11	1	97050820	3535
ENSMUSG00000039043	protein_coding	Arpin	ENSMUST00000048731	protein_coding	principal1	7	-1	79935359	2277
ENSMUSG00000048612	protein_coding	Myof	ENSMUST00000172095	protein_coding		19	-1	38043577	7094
ENSMUSG00000082476	processed_pseudogene	Gm12242	ENSMUST00000118824	processed_pseudogene		11	1	57449107	738
ENSMUSG00000084757	lincRNA	1700057H15Rik	ENSMUST00000148832	lincRNA		4	-1	124418858	484
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000142827	nonsense_mediated_decay		13	1	63819954	759
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000222855	retained_intron		13	1	63840584	1889
ENSMUSG00000035448	protein_coding	Ccr3	ENSMUST00000039171	protein_coding	principal1	9	1	124021972	3272
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000126413	protein_coding		1	1	36307733	870
ENSMUSG00000079177	protein_coding	Fam228a	ENSMUST00000111154	protein_coding	principal2	12	-1	4738419	3004
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000118543	protein_coding		5	-1	65391005	1193
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000109776	processed_transcript		13	1	63870509	963
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000162086	processed_transcript		13	1	63891381	1309
ENSMUSG00000079177	protein_coding	Fam228a	ENSMUST00000222363	protein_coding	principal2	12	-1	4738318	2284
ENSMUSG00000084757	lincRNA	1700057H15Rik	ENSMUST00000127913	lincRNA		4	-1	124451295	595
ENSMUSG00000021470	protein_coding	Ercc6l2	ENSMUST00000222300	processed_transcript		13	1	63894027	3858
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000003183	protein_coding	principal1	7	-1	17027916	2072
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000127874	protein_coding		5	-1	65391399	2690
ENSMUSG00000079177	protein_coding	Fam228a	ENSMUST00000220978	protein_coding	alternative2	12	-1	4737771	861
ENSMUSG00000084757	lincRNA	1700057H15Rik	ENSMUST00000143859	lincRNA		4	-1	124485959	704
ENSMUSG00000114095	sense_intronic	Gm47424	ENSMUST00000221964	sense_intronic		13	1	63861082	659
ENSMUSG00000074199	protein_coding	Krtdap	ENSMUST00000190480	retained_intron		7	1	30787896	217
ENSMUSG00000084757	lincRNA	1700057H15Rik	ENSMUST00000156566	lincRNA		4	-1	124451285	320
ENSMUSG00000079177	protein_coding	Fam228a	ENSMUST00000220075	retained_intron		12	-1	4738430	1108
ENSMUSG00000049103	protein_coding	Ccr2	ENSMUST00000171719	protein_coding	principal1	9	1	124101950	2265
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000142597	protein_coding		7	-1	17027809	1786
ENSMUSG00000099678	lincRNA	Gm28351	ENSMUST00000186261	lincRNA		19	1	60241853	559
ENSMUSG00000111971	antisense	Gm48678	ENSMUST00000217882	antisense		12	-1	4655888	2071
ENSMUSG00000030035	protein_coding	Wbp1	ENSMUST00000032111	protein_coding	principal4	6	-1	83121559	1419
ENSMUSG00000042189	protein_coding	Tekt3	ENSMUST00000035732	protein_coding	principal1	11	1	63061654	1748
ENSMUSG00000111971	antisense	Gm48678	ENSMUST00000218352	antisense		12	-1	4655888	3343
ENSMUSG00000001445	protein_coding	Mrpl10	ENSMUST00000001485	protein_coding	principal1	11	1	97041560	1708
ENSMUSG00000030035	protein_coding	Wbp1	ENSMUST00000113936	protein_coding	alternative1	6	-1	83121559	1314
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000142831	retained_intron		7	-1	17007083	539
ENSMUSG00000045052	protein_coding	Prlhr	ENSMUST00000051277	protein_coding	principal1	19	-1	60468304	1573
ENSMUSG00000118449	bidirectional_promoter_lncRNA	AC241534.1	ENSMUST00000238375	bidirectional_promoter_lncRNA		12	-1	4593029	3233
ENSMUSG00000049103	protein_coding	Ccr2	ENSMUST00000168841	protein_coding	principal1	9	1	124102158	5728
ENSMUSG00000118449	bidirectional_promoter_lncRNA	AC241534.1	ENSMUST00000170816	bidirectional_promoter_lncRNA		12	-1	4592927	102
ENSMUSG00000049103	protein_coding	Ccr2	ENSMUST00000055918	protein_coding	principal1	9	1	124102183	2999
ENSMUSG00000021391	protein_coding	Cenpp	ENSMUST00000021818	protein_coding	principal1	13	-1	49652785	1144
ENSMUSG00000001445	protein_coding	Mrpl10	ENSMUST00000054252	protein_coding		11	1	97041595	744
ENSMUSG00000043929	protein_coding	Klhl15	ENSMUST00000113911	protein_coding		X	1	94234990	1227
ENSMUSG00000030035	protein_coding	Wbp1	ENSMUST00000131939	retained_intron		6	-1	83121559	1902
ENSMUSG00000049103	protein_coding	Ccr2	ENSMUST00000165984	protein_coding	principal1	9	1	124105626	3515
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000141079	retained_intron		7	-1	128461652	4266
ENSMUSG00000030035	protein_coding	Wbp1	ENSMUST00000146328	protein_coding		6	-1	83121387	981
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000124573	retained_intron		7	-1	17015470	840
ENSMUSG00000100709	lincRNA	Gm28295	ENSMUST00000188322	lincRNA		Y	1	32244058	622
ENSMUSG00000100709	lincRNA	Gm28295	ENSMUST00000190203	lincRNA		Y	1	32244058	437
ENSMUSG00000021391	protein_coding	Cenpp	ENSMUST00000221751	processed_transcript		13	-1	49652767	2059
ENSMUSG00000030035	protein_coding	Wbp1	ENSMUST00000151393	protein_coding		6	-1	83121406	837
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000172631	retained_intron		3	-1	87762214	4539
ENSMUSG00000041235	protein_coding	Chd7	ENSMUST00000051558	protein_coding	principal1	4	1	8691365	10216
ENSMUSG00000042670	protein_coding	Immp1l	ENSMUST00000037499	protein_coding	principal1	2	1	105904638	955
ENSMUSG00000030035	protein_coding	Wbp1	ENSMUST00000131936	protein_coding		6	-1	83120208	399
ENSMUSG00000029265	protein_coding	Dr1	ENSMUST00000031190	protein_coding	principal1	5	1	108268897	3085
ENSMUSG00000085614	processed_transcript	1700123M08Rik	ENSMUST00000154194	processed_transcript		4	1	11966565	535
ENSMUSG00000043929	protein_coding	Klhl15	ENSMUST00000113908	protein_coding		X	1	94234927	1235
ENSMUSG00000041235	protein_coding	Chd7	ENSMUST00000129655	protein_coding		4	1	8710340	458
ENSMUSG00000085614	processed_transcript	1700123M08Rik	ENSMUST00000146154	processed_transcript		4	1	11966574	770
ENSMUSG00000029265	protein_coding	Dr1	ENSMUST00000154862	processed_transcript		5	1	108276920	490
ENSMUSG00000030035	protein_coding	Wbp1	ENSMUST00000142493	retained_intron		6	-1	83120878	620
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000106228	protein_coding		7	-1	128461673	2835
ENSMUSG00000071650	protein_coding	Ganab	ENSMUST00000096246	protein_coding	principal2	19	1	8898101	3860
ENSMUSG00000085614	processed_transcript	1700123M08Rik	ENSMUST00000128443	processed_transcript		4	1	11980162	447
ENSMUSG00000041235	protein_coding	Chd7	ENSMUST00000170391	protein_coding		4	1	8751438	3462
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000138353	processed_transcript		7	-1	17027924	712
ENSMUSG00000030035	protein_coding	Wbp1	ENSMUST00000123394	processed_transcript		6	-1	83121259	462
ENSMUSG00000029394	protein_coding	Cdk2ap1	ENSMUST00000031341	protein_coding	principal2	5	-1	124354671	1315
ENSMUSG00000029102	protein_coding	Hgfac	ENSMUST00000030985	protein_coding	principal1	5	1	35041509	2135
ENSMUSG00000030035	protein_coding	Wbp1	ENSMUST00000205023	protein_coding		6	-1	83121274	716
ENSMUSG00000071650	protein_coding	Ganab	ENSMUST00000235274	protein_coding	alternative2	19	1	8898107	3788
ENSMUSG00000041235	protein_coding	Chd7	ENSMUST00000130709	processed_transcript		4	1	8840322	741
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000154880	retained_intron		7	-1	17009181	604
ENSMUSG00000071650	protein_coding	Ganab	ENSMUST00000236499	retained_intron		19	1	8898112	1226
ENSMUSG00000095968	lincRNA	Gm21842	ENSMUST00000185311	lincRNA		Y	1	32283539	174
ENSMUSG00000022303	protein_coding	Dcstamp	ENSMUST00000227368	protein_coding		15	1	39745932	1825
ENSMUSG00000095968	lincRNA	Gm21842	ENSMUST00000177552	lincRNA		Y	1	32283545	498
ENSMUSG00000029102	protein_coding	Hgfac	ENSMUST00000202573	protein_coding		5	1	35041577	434
ENSMUSG00000031710	protein_coding	Ucp1	ENSMUST00000034146	protein_coding	principal1	8	1	83290352	1636
ENSMUSG00000043929	protein_coding	Klhl15	ENSMUST00000096369	protein_coding		X	1	94234987	3944
ENSMUSG00000041235	protein_coding	Chd7	ENSMUST00000222546	protein_coding		4	1	8855231	582
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000045931	protein_coding	principal1	12	1	84316852	2597
ENSMUSG00000022303	protein_coding	Dcstamp	ENSMUST00000228556	protein_coding		15	1	39745932	1684
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000156366	processed_transcript		7	-1	17027894	657
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000133444	nonsense_mediated_decay		7	-1	128444905	953
ENSMUSG00000071650	protein_coding	Ganab	ENSMUST00000235704	processed_transcript		19	1	8898125	662
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000146920	retained_intron		7	-1	17010146	717
ENSMUSG00000098760	antisense	Gm2164	ENSMUST00000184062	antisense		4	-1	124657169	424
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000205835	protein_coding		7	-1	128461209	562
ENSMUSG00000079227	protein_coding	Ccr5	ENSMUST00000111442	protein_coding	principal1	9	1	124121543	8227
ENSMUSG00000071650	protein_coding	Ganab	ENSMUST00000238063	retained_intron		19	1	8908258	675
ENSMUSG00000041235	protein_coding	Chd7	ENSMUST00000039267	protein_coding	principal1	4	1	8690921	9444
ENSMUSG00000043929	protein_coding	Klhl15	ENSMUST00000142691	retained_intron		X	1	94234990	1532
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000221490	processed_transcript		12	1	84317115	916
ENSMUSG00000043929	protein_coding	Klhl15	ENSMUST00000153900	protein_coding		X	1	94234604	627
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000223355	processed_transcript		12	1	84317118	342
ENSMUSG00000073759	lincRNA	4933407E24Rik	ENSMUST00000133499	lincRNA		4	1	124569190	969
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000033135	protein_coding	alternative1	7	-1	128461355	1580
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000057885	protein_coding	principal1	5	-1	65391444	738
ENSMUSG00000029394	protein_coding	Cdk2ap1	ENSMUST00000111474	protein_coding	alternative1	5	-1	124351654	1286
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000127311	processed_transcript		7	-1	17024746	598
ENSMUSG00000079227	protein_coding	Ccr5	ENSMUST00000169553	processed_transcript		9	1	124121573	349
ENSMUSG00000043929	protein_coding	Klhl15	ENSMUST00000150999	processed_transcript		X	1	94234599	364
ENSMUSG00000029213	protein_coding	Commd8	ENSMUST00000013693	protein_coding	principal1	5	-1	72168189	3895
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000222258	protein_coding		12	1	84317118	2329
ENSMUSG00000029394	protein_coding	Cdk2ap1	ENSMUST00000111473	protein_coding	alternative1	5	-1	124350254	715
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000153242	processed_transcript		7	-1	17027615	513
ENSMUSG00000029102	protein_coding	Hgfac	ENSMUST00000201038	retained_intron		5	1	35041577	2476
ENSMUSG00000003099	protein_coding	Ppp5c	ENSMUST00000145997	processed_transcript		7	-1	17027789	381
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000140879	retained_intron		5	-1	65391398	2651
ENSMUSG00000079227	protein_coding	Ccr5	ENSMUST00000168179	nonsense_mediated_decay		9	1	124121573	663
ENSMUSG00000029394	protein_coding	Cdk2ap1	ENSMUST00000111472	protein_coding	alternative1	5	-1	124352233	648
ENSMUSG00000090125	protein_coding	Pou3f1	ENSMUST00000053491	protein_coding	principal1	4	1	124656807	3849
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000222431	processed_transcript		12	1	84317122	2730
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000123666	nonsense_mediated_decay		7	-1	128461717	2319
ENSMUSG00000083427	processed_pseudogene	Gm12007	ENSMUST00000120978	processed_pseudogene		11	1	14722617	597
ENSMUSG00000079227	protein_coding	Ccr5	ENSMUST00000171499	protein_coding		9	1	124121581	403
ENSMUSG00000029102	protein_coding	Hgfac	ENSMUST00000202126	retained_intron		5	1	35043607	1177
ENSMUSG00000043929	protein_coding	Klhl15	ENSMUST00000113916	protein_coding	principal1	X	1	94234930	2363
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000196667	protein_coding		5	-1	65390986	675
ENSMUSG00000029394	protein_coding	Cdk2ap1	ENSMUST00000196910	protein_coding	alternative1	5	-1	124363082	483
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000222832	protein_coding		12	1	84317125	1859
ENSMUSG00000029102	protein_coding	Hgfac	ENSMUST00000202921	protein_coding		5	1	35044349	745
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000141126	protein_coding		7	-1	128461346	1344
ENSMUSG00000079227	protein_coding	Ccr5	ENSMUST00000171579	processed_transcript		9	1	124126684	745
ENSMUSG00000053825	protein_coding	Ppfia2	ENSMUST00000029404	protein_coding	alternative1	10	1	106470339	5429
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000220931	protein_coding		12	1	84317127	1569
ENSMUSG00000030878	protein_coding	Cdr2	ENSMUST00000033169	protein_coding	principal1	7	-1	120982312	2525
ENSMUSG00000030034	protein_coding	Ino80b	ENSMUST00000113935	protein_coding	principal1	6	-1	83125431	1503
ENSMUSG00000029102	protein_coding	Hgfac	ENSMUST00000201994	retained_intron		5	1	35044826	685
ENSMUSG00000082156	processed_pseudogene	Gm12008	ENSMUST00000117791	processed_pseudogene		11	1	14780027	755
ENSMUSG00000109246	unprocessed_pseudogene	Olfr712-ps1	ENSMUST00000207690	unprocessed_pseudogene		7	-1	106989666	950
ENSMUSG00000079227	protein_coding	Ccr5	ENSMUST00000097855	nonsense_mediated_decay		9	1	124128748	449
ENSMUSG00000029213	protein_coding	Commd8	ENSMUST00000199767	nonsense_mediated_decay		5	-1	72168164	3360
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000147966	retained_intron		5	-1	65389373	456
ENSMUSG00000022303	protein_coding	Dcstamp	ENSMUST00000022913	protein_coding	principal1	15	1	39745932	1997
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000133089	nonsense_mediated_decay		7	-1	128448346	784
ENSMUSG00000030034	protein_coding	Ino80b	ENSMUST00000143814	nonsense_mediated_decay		6	-1	83125431	1310
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000120094	protein_coding	principal1	5	-1	65391380	680
ENSMUSG00000029213	protein_coding	Commd8	ENSMUST00000198951	retained_intron		5	-1	72161138	1114
ENSMUSG00000029102	protein_coding	Hgfac	ENSMUST00000202168	retained_intron		5	1	35046565	695
ENSMUSG00000110834	lincRNA	Gm39469	ENSMUST00000214845	lincRNA		9	-1	124282139	461
ENSMUSG00000030034	protein_coding	Ino80b	ENSMUST00000203085	retained_intron		6	-1	83124868	297
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000152328	retained_intron		7	-1	128445705	560
ENSMUSG00000043929	protein_coding	Klhl15	ENSMUST00000170594	protein_coding	principal1	X	1	94235311	2027
ENSMUSG00000029213	protein_coding	Commd8	ENSMUST00000196152	processed_transcript		5	-1	72165720	520
ENSMUSG00000116975	lincRNA	4930470H14Rik	ENSMUST00000231647	lincRNA		17	-1	4082995	1734
ENSMUSG00000030878	protein_coding	Cdr2	ENSMUST00000140247	nonsense_mediated_decay		7	-1	120981790	820
ENSMUSG00000022303	protein_coding	Dcstamp	ENSMUST00000228701	protein_coding		15	1	39745934	345
ENSMUSG00000096891	unprocessed_pseudogene	Mup-ps8	ENSMUST00000178663	unprocessed_pseudogene		4	1	60756812	545
ENSMUSG00000021388	protein_coding	Aspn	ENSMUST00000021820	protein_coding	principal1	13	1	49544487	2310
ENSMUSG00000029213	protein_coding	Commd8	ENSMUST00000196241	protein_coding		5	-1	72168156	333
ENSMUSG00000112315	processed_pseudogene	Gm5183	ENSMUST00000219409	processed_pseudogene		12	1	56050533	629
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000205278	nonsense_mediated_decay		7	-1	128455028	804
ENSMUSG00000030034	protein_coding	Ino80b	ENSMUST00000032109	protein_coding		6	-1	83125029	1038
ENSMUSG00000022303	protein_coding	Dcstamp	ENSMUST00000227792	protein_coding		15	1	39745944	1367
ENSMUSG00000030878	protein_coding	Cdr2	ENSMUST00000207722	retained_intron		7	-1	120982285	3468
ENSMUSG00000116615	processed_transcript	4930548J01Rik	ENSMUST00000231354	lincRNA		17	-1	4122102	731
ENSMUSG00000116615	processed_transcript	4930548J01Rik	ENSMUST00000231319	retained_intron		17	-1	4122113	430
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000205774	retained_intron		7	-1	128448570	1808
ENSMUSG00000108109	antisense	Gm44287	ENSMUST00000203069	antisense		6	1	83122520	290
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000222606	nonsense_mediated_decay		12	1	84317130	2284
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000136782	retained_intron		7	-1	128448878	674
ENSMUSG00000116767	lincRNA	4930517M08Rik	ENSMUST00000232624	lincRNA		17	1	4634978	971
ENSMUSG00000021388	protein_coding	Aspn	ENSMUST00000177948	protein_coding	principal1	13	1	49544443	2329
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000221656	nonsense_mediated_decay		12	1	84317137	2228
ENSMUSG00000074829	protein_coding	2010315B03Rik	ENSMUST00000177714	protein_coding	principal1	9	-1	124312696	2623
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000147660	retained_intron		5	-1	65391381	1586
ENSMUSG00000030846	protein_coding	Tial1	ENSMUST00000165023	protein_coding	alternative1	7	-1	128461323	2003
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000047168	protein_coding	principal2	17	1	31386210	2089
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000222773	processed_transcript		12	1	84317145	655
ENSMUSG00000113255	protein_coding	Tes3-ps	ENSMUST00000222404	protein_coding	principal1	13	1	49493318	3272
ENSMUSG00000074829	protein_coding	2010315B03Rik	ENSMUST00000071300	protein_coding		9	-1	124312642	795
ENSMUSG00000106372	IG_V_pseudogene	Igkv14-126-1	ENSMUST00000199899	IG_V_pseudogene		6	1	67876011	346
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000220955	processed_transcript		12	1	84327123	780
ENSMUSG00000084918	lincRNA	Gm12708	ENSMUST00000136941	lincRNA		4	1	95193313	1046
ENSMUSG00000047215	protein_coding	Rpl9	ENSMUST00000128074	retained_intron		5	-1	65390991	1729
ENSMUSG00000074829	protein_coding	2010315B03Rik	ENSMUST00000189915	protein_coding		9	-1	124311899	683
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000222471	protein_coding		12	1	84327440	889
ENSMUSG00000050708	protein_coding	Ftl1	ENSMUST00000094434	protein_coding	principal1	7	-1	45459884	968
ENSMUSG00000028933	protein_coding	Xrcc2	ENSMUST00000030773	protein_coding	principal1	5	-1	25705825	3247
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000222450	protein_coding		12	1	84331776	454
ENSMUSG00000070417	protein_coding	Olfr2	ENSMUST00000207280	nonsense_mediated_decay		7	-1	107006047	1744
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000222875	retained_intron		12	1	84332327	1734
ENSMUSG00000084918	lincRNA	Gm12708	ENSMUST00000126143	lincRNA		4	1	95193362	349
ENSMUSG00000070417	protein_coding	Olfr2	ENSMUST00000217764	processed_transcript		7	-1	107006047	637
ENSMUSG00000053825	protein_coding	Ppfia2	ENSMUST00000169303	processed_transcript		10	1	106470340	2484
ENSMUSG00000109640	TEC	Gm45413	ENSMUST00000210389	TEC		8	-1	26066052	3538
ENSMUSG00000074829	protein_coding	2010315B03Rik	ENSMUST00000185949	protein_coding		9	-1	124312671	634
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000223130	retained_intron		12	1	84333238	2630
ENSMUSG00000074829	protein_coding	2010315B03Rik	ENSMUST00000186041	processed_transcript		9	-1	124312671	1179
ENSMUSG00000100129	lincRNA	Gm29064	ENSMUST00000187014	lincRNA		4	-1	95402790	813
ENSMUSG00000028933	protein_coding	Xrcc2	ENSMUST00000114922	processed_transcript		5	-1	25693438	890
ENSMUSG00000101872	antisense	Gm29237	ENSMUST00000186216	antisense		11	1	30106394	448
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000127929	protein_coding	principal2	17	1	31386254	1891
ENSMUSG00000070417	protein_coding	Olfr2	ENSMUST00000211432	nonsense_mediated_decay		7	-1	107006072	1812
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000221867	retained_intron		12	1	84338175	841
ENSMUSG00000028933	protein_coding	Xrcc2	ENSMUST00000134972	protein_coding		5	-1	25705773	464
ENSMUSG00000059970	protein_coding	Hspa2	ENSMUST00000080449	protein_coding	principal1	12	1	76404176	2524
ENSMUSG00000028933	protein_coding	Xrcc2	ENSMUST00000131308	retained_intron		5	-1	25705764	1740
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000222506	nonsense_mediated_decay		12	1	84338673	711
ENSMUSG00000059970	protein_coding	Hspa2	ENSMUST00000219555	protein_coding	principal1	12	1	76404409	2526
ENSMUSG00000050708	protein_coding	Ftl1	ENSMUST00000211694	retained_intron		7	-1	45458799	604
ENSMUSG00000042472	protein_coding	Zfp410	ENSMUST00000220832	retained_intron		12	1	84339991	661
ENSMUSG00000111194	transcribed_unprocessed_pseudogene	Gm47180	ENSMUST00000216416	processed_transcript		9	1	124338979	802
ENSMUSG00000084183	processed_pseudogene	Gm12009	ENSMUST00000121361	processed_pseudogene		11	1	15049158	1100
ENSMUSG00000084939	processed_transcript	Gm830	ENSMUST00000142458	processed_transcript		4	-1	95487394	3502
ENSMUSG00000070417	protein_coding	Olfr2	ENSMUST00000214105	protein_coding	principal1	7	-1	107005694	5798
ENSMUSG00000085437	antisense	1700047A11Rik	ENSMUST00000153552	antisense		8	1	26082609	622
ENSMUSG00000050708	protein_coding	Ftl1	ENSMUST00000210375	processed_transcript		7	-1	45459421	710
ENSMUSG00000070417	protein_coding	Olfr2	ENSMUST00000216375	protein_coding	principal1	7	-1	107005982	5828
ENSMUSG00000053825	protein_coding	Ppfia2	ENSMUST00000217854	protein_coding	principal2	10	1	106470346	8885
ENSMUSG00000111194	transcribed_unprocessed_pseudogene	Gm47180	ENSMUST00000215276	transcribed_unprocessed_pseudogene		9	1	124338982	610
ENSMUSG00000050708	protein_coding	Ftl1	ENSMUST00000210106	nonsense_mediated_decay		7	-1	45459839	943
ENSMUSG00000085437	antisense	1700047A11Rik	ENSMUST00000144750	antisense		8	1	26082616	427
ENSMUSG00000070417	protein_coding	Olfr2	ENSMUST00000208147	protein_coding	principal1	7	-1	107006058	6178
ENSMUSG00000085835	processed_transcript	Gm12707	ENSMUST00000155789	processed_transcript		4	1	95483956	489
ENSMUSG00000022652	protein_coding	Morc1	ENSMUST00000023330	protein_coding	principal1	16	1	48431237	3045
ENSMUSG00000111194	transcribed_unprocessed_pseudogene	Gm47180	ENSMUST00000217178	processed_transcript		9	1	124338982	1097
ENSMUSG00000020419	protein_coding	Hormad2	ENSMUST00000109948	protein_coding	principal1	11	-1	4440745	1969
ENSMUSG00000110795	TEC	Gm47179	ENSMUST00000215882	TEC		9	-1	124342618	1836
ENSMUSG00000050708	protein_coding	Ftl1	ENSMUST00000211500	retained_intron		7	-1	45459463	825
ENSMUSG00000031822	protein_coding	Gse1	ENSMUST00000034279	protein_coding	principal4	8	1	120488447	7127
ENSMUSG00000111733	lincRNA	Gm47181	ENSMUST00000217183	lincRNA		9	-1	124347514	398
ENSMUSG00000070417	protein_coding	Olfr2	ENSMUST00000094109	protein_coding	principal1	7	-1	107002605	1250
ENSMUSG00000110183	antisense	Gm45411	ENSMUST00000209647	antisense		8	1	26023410	345
ENSMUSG00000050708	protein_coding	Ftl1	ENSMUST00000210864	protein_coding		7	-1	45459651	503
ENSMUSG00000110350	TEC	Gm10252	ENSMUST00000209541	TEC		7	1	45459469	832
ENSMUSG00000053825	protein_coding	Ppfia2	ENSMUST00000219024	processed_transcript		10	1	106893006	2977
ENSMUSG00000022652	protein_coding	Morc1	ENSMUST00000232256	processed_transcript		16	1	48479632	925
ENSMUSG00000079741	transcribed_unprocessed_pseudogene	Nlrp4g	ENSMUST00000067621	transcribed_unprocessed_pseudogene		9	1	124348872	2030
ENSMUSG00000079741	transcribed_unprocessed_pseudogene	Nlrp4g	ENSMUST00000214229	processed_transcript		9	1	124349903	655
ENSMUSG00000020419	protein_coding	Hormad2	ENSMUST00000020689	nonsense_mediated_decay		11	-1	4441103	1915
ENSMUSG00000022652	protein_coding	Morc1	ENSMUST00000232195	retained_intron		16	1	48594667	4012
ENSMUSG00000079741	transcribed_unprocessed_pseudogene	Nlrp4g	ENSMUST00000215602	processed_transcript		9	1	124350243	687
ENSMUSG00000020419	protein_coding	Hormad2	ENSMUST00000149443	processed_transcript		11	-1	4427262	323
ENSMUSG00000112201	antisense	4930532I03Rik	ENSMUST00000218463	antisense		10	-1	106602480	1724
ENSMUSG00000111350	unprocessed_pseudogene	Gm47182	ENSMUST00000216828	unprocessed_pseudogene		9	1	124369217	277
ENSMUSG00000028747	protein_coding	Htr6	ENSMUST00000105802	protein_coding	principal1	4	-1	139075570	2341
ENSMUSG00000020419	protein_coding	Hormad2	ENSMUST00000130174	protein_coding		11	-1	4441105	583
ENSMUSG00000031822	protein_coding	Gse1	ENSMUST00000120493	protein_coding	alternative2	8	1	120535857	4610
ENSMUSG00000112201	antisense	4930532I03Rik	ENSMUST00000219229	antisense		10	-1	106601060	691
ENSMUSG00000030877	protein_coding	Mfsd13b	ENSMUST00000033166	protein_coding	principal2	7	1	120982509	1883
ENSMUSG00000034620	protein_coding	Rxylt1	ENSMUST00000140299	protein_coding	principal1	10	-1	122097371	4793
ENSMUSG00000020419	protein_coding	Hormad2	ENSMUST00000124249	processed_transcript		11	-1	4435754	372
ENSMUSG00000060701	protein_coding	Fpr-rs3	ENSMUST00000071189	protein_coding	principal1	17	-1	20624877	1032
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000194598	protein_coding	principal2	17	1	26941253	6011
ENSMUSG00000030877	protein_coding	Mfsd13b	ENSMUST00000149535	protein_coding		7	1	120982525	626
ENSMUSG00000028747	protein_coding	Htr6	ENSMUST00000068036	protein_coding	principal1	4	-1	139074789	1362
ENSMUSG00000030877	protein_coding	Mfsd13b	ENSMUST00000138177	protein_coding		7	1	120982528	347
ENSMUSG00000030877	protein_coding	Mfsd13b	ENSMUST00000216241	protein_coding	alternative2	7	1	120982584	1761
ENSMUSG00000116649	processed_pseudogene	Gm49780	ENSMUST00000232212	processed_pseudogene		17	-1	4792959	314
ENSMUSG00000030877	protein_coding	Mfsd13b	ENSMUST00000133939	protein_coding		7	1	120991823	634
ENSMUSG00000021500	protein_coding	Ddx46	ENSMUST00000224551	retained_intron		13	1	55635028	4056
ENSMUSG00000020419	protein_coding	Hormad2	ENSMUST00000109949	protein_coding	principal1	11	-1	4441082	1343
ENSMUSG00000031822	protein_coding	Gse1	ENSMUST00000118136	protein_coding	alternative2	8	1	120537429	4492
ENSMUSG00000082615	processed_pseudogene	Gm13239	ENSMUST00000119920	processed_pseudogene		4	1	145689842	637
ENSMUSG00000111523	TEC	Gm47183	ENSMUST00000217222	TEC		9	1	124471703	774
ENSMUSG00000066643	protein_coding	Wdr35	ENSMUST00000085745	protein_coding	principal3	12	1	8973892	4501
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000229490	protein_coding	alternative2	17	1	26941382	4048
ENSMUSG00000116813	lincRNA	4930579D07Rik	ENSMUST00000232083	lincRNA		17	-1	4854482	1488
ENSMUSG00000116813	lincRNA	4930579D07Rik	ENSMUST00000232440	lincRNA		17	-1	4892987	828
ENSMUSG00000058050	processed_pseudogene	Gm9234	ENSMUST00000077747	processed_pseudogene		7	-1	121015633	492
ENSMUSG00000034620	protein_coding	Rxylt1	ENSMUST00000038772	nonsense_mediated_decay		10	-1	122097156	1546
ENSMUSG00000116620	processed_pseudogene	Gm4828	ENSMUST00000231980	processed_pseudogene		17	1	4880626	490
ENSMUSG00000031822	protein_coding	Gse1	ENSMUST00000211997	processed_transcript		8	1	120562623	373
ENSMUSG00000034620	protein_coding	Rxylt1	ENSMUST00000125506	retained_intron		10	-1	122089389	519
ENSMUSG00000085027	lincRNA	Gm11840	ENSMUST00000156947	lincRNA		4	-1	12009043	696
ENSMUSG00000093803	protein_coding	Ppp2r3d	ENSMUST00000188509	protein_coding		9	-1	124423583	556
ENSMUSG00000110296	antisense	Gm45533	ENSMUST00000210295	antisense		4	1	139075824	165
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000201702	protein_coding	alternative2	17	1	26941442	3920
ENSMUSG00000034620	protein_coding	Rxylt1	ENSMUST00000129359	retained_intron		10	-1	122090705	651
ENSMUSG00000034620	protein_coding	Rxylt1	ENSMUST00000141057	retained_intron		10	-1	122096136	644
ENSMUSG00000116551	lincRNA	Gm41517	ENSMUST00000232522	lincRNA		17	-1	4946814	654
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000201349	protein_coding		17	1	26941453	4057
ENSMUSG00000031822	protein_coding	Gse1	ENSMUST00000147327	retained_intron		8	1	120571281	809
ENSMUSG00000034620	protein_coding	Rxylt1	ENSMUST00000135083	processed_transcript		10	-1	122097126	399
ENSMUSG00000031822	protein_coding	Gse1	ENSMUST00000141113	processed_transcript		8	1	120571329	672
ENSMUSG00000038128	protein_coding	Camk4	ENSMUST00000234205	nonsense_mediated_decay		18	1	32934931	1868
ENSMUSG00000093803	protein_coding	Ppp2r3d	ENSMUST00000216876	retained_intron		9	-1	124440868	766
ENSMUSG00000101779	lincRNA	Gm28170	ENSMUST00000186892	lincRNA		Y	1	32305046	622
ENSMUSG00000038128	protein_coding	Camk4	ENSMUST00000234654	nonsense_mediated_decay		18	1	32934972	1829
ENSMUSG00000101779	lincRNA	Gm28170	ENSMUST00000187851	lincRNA		Y	1	32305046	437
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000193200	nonsense_mediated_decay		17	1	26941499	4532
ENSMUSG00000073898	protein_coding	Olfr713	ENSMUST00000213623	protein_coding	principal1	7	1	107031174	6329
ENSMUSG00000024171	protein_coding	Prss28	ENSMUST00000015267	protein_coding	principal1	17	1	25308646	1190
ENSMUSG00000073898	protein_coding	Olfr713	ENSMUST00000098139	protein_coding		7	1	107036136	975
ENSMUSG00000039239	protein_coding	Tgfb2	ENSMUST00000045288	protein_coding	principal3	1	-1	186705989	5116
ENSMUSG00000038128	protein_coding	Camk4	ENSMUST00000234001	protein_coding		18	1	32938391	526
ENSMUSG00000029263	protein_coding	Pigg	ENSMUST00000031189	protein_coding	principal3	5	1	108312609	3427
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000081285	protein_coding	alternative2	17	1	26952138	4315
ENSMUSG00000024171	protein_coding	Prss28	ENSMUST00000234259	protein_coding	principal1	17	1	25309377	873
ENSMUSG00000058186	protein_coding	Zfp980	ENSMUST00000105738	protein_coding	principal1	4	1	145670685	4006
ENSMUSG00000093803	protein_coding	Ppp2r3d	ENSMUST00000180233	protein_coding		9	-1	124440897	422
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000228963	protein_coding	alternative2	17	1	26952319	4133
ENSMUSG00000058186	protein_coding	Zfp980	ENSMUST00000180014	protein_coding	principal1	4	1	145696161	1938
ENSMUSG00000038128	protein_coding	Camk4	ENSMUST00000042868	protein_coding	principal1	18	1	32939158	2717
ENSMUSG00000117295	processed_pseudogene	Gm5492	ENSMUST00000232988	processed_pseudogene		17	1	20661558	510
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000231853	protein_coding	alternative2	17	1	26952886	4256
ENSMUSG00000093803	protein_coding	Ppp2r3d	ENSMUST00000216394	protein_coding		9	-1	124442746	353
ENSMUSG00000029263	protein_coding	Pigg	ENSMUST00000119014	protein_coding	alternative2	5	1	108312609	4573
ENSMUSG00000039239	protein_coding	Tgfb2	ENSMUST00000195201	protein_coding	alternative1	1	-1	186705700	3485
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000142319	protein_coding		1	1	36307754	441
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000202939	nonsense_mediated_decay		17	1	26957826	821
ENSMUSG00000029263	protein_coding	Pigg	ENSMUST00000118910	protein_coding		5	1	108312636	3030
ENSMUSG00000097710	antisense	2310026I22Rik	ENSMUST00000180941	antisense		18	-1	32939229	1307
ENSMUSG00000106103	TEC	Gm43081	ENSMUST00000199082	TEC		5	-1	108312749	1380
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000200799	retained_intron		17	1	26959838	423
ENSMUSG00000042848	protein_coding	Vmn1r226	ENSMUST00000232708	protein_coding	principal1	17	1	20682843	6084
ENSMUSG00000042848	protein_coding	Vmn1r226	ENSMUST00000233808	protein_coding	principal1	17	1	20682843	5807
ENSMUSG00000093803	protein_coding	Ppp2r3d	ENSMUST00000189707	protein_coding	principal1	9	-1	124442748	385
ENSMUSG00000066643	protein_coding	Wdr35	ENSMUST00000159126	retained_intron		12	1	8974011	2921
ENSMUSG00000042848	protein_coding	Vmn1r226	ENSMUST00000232818	protein_coding	principal1	17	1	20682843	5878
ENSMUSG00000093803	protein_coding	Ppp2r3d	ENSMUST00000217354	protein_coding		9	-1	124476898	2557
ENSMUSG00000042848	protein_coding	Vmn1r226	ENSMUST00000233159	protein_coding	principal1	17	1	20682843	6078
ENSMUSG00000066643	protein_coding	Wdr35	ENSMUST00000160329	nonsense_mediated_decay		12	1	8974011	2792
ENSMUSG00000093803	protein_coding	Ppp2r3d	ENSMUST00000187126	protein_coding		9	-1	124476862	777
ENSMUSG00000042848	protein_coding	Vmn1r226	ENSMUST00000233959	protein_coding	principal1	17	1	20682843	5801
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000201186	nonsense_mediated_decay		17	1	26962306	827
ENSMUSG00000093803	protein_coding	Ppp2r3d	ENSMUST00000180270	protein_coding		9	-1	124424154	450
ENSMUSG00000111025	unprocessed_pseudogene	Gm47185	ENSMUST00000215277	unprocessed_pseudogene		9	1	124451955	643
ENSMUSG00000042848	protein_coding	Vmn1r226	ENSMUST00000233722	protein_coding	principal1	17	1	20682843	5872
ENSMUSG00000042848	protein_coding	Vmn1r226	ENSMUST00000061756	protein_coding	principal1	17	1	20687508	897
ENSMUSG00000039239	protein_coding	Tgfb2	ENSMUST00000191766	retained_intron		1	-1	186649990	744
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000202049	nonsense_mediated_decay		17	1	26963012	700
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000150747	retained_intron		1	1	36307754	407
ENSMUSG00000064165	protein_coding	Krt39	ENSMUST00000107445	protein_coding	principal1	11	-1	99521338	1633
ENSMUSG00000066643	protein_coding	Wdr35	ENSMUST00000111113	protein_coding	alternative1	12	1	8974047	4312
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000202208	nonsense_mediated_decay		17	1	26963026	663
ENSMUSG00000084279	processed_pseudogene	Gm13232	ENSMUST00000121816	processed_pseudogene		4	-1	145730212	632
ENSMUSG00000067629	protein_coding	Syngap1	ENSMUST00000177932	protein_coding	alternative2	17	1	26941452	3927
ENSMUSG00000039239	protein_coding	Tgfb2	ENSMUST00000194960	retained_intron		1	-1	186650056	898
ENSMUSG00000052137	protein_coding	Rbm12b2	ENSMUST00000095143	protein_coding	principal1	4	1	12089439	3147
ENSMUSG00000064165	protein_coding	Krt39	ENSMUST00000076948	protein_coding	principal1	11	-1	99521258	1449
ENSMUSG00000067951	protein_coding	Vmn1r227	ENSMUST00000233597	protein_coding	principal1	17	1	20729843	4406
ENSMUSG00000098131	unprocessed_pseudogene	Gm26989	ENSMUST00000182608	unprocessed_pseudogene		5	1	137002002	749
ENSMUSG00000039239	protein_coding	Tgfb2	ENSMUST00000194593	processed_transcript		1	-1	186668155	359
ENSMUSG00000038773	protein_coding	Kdm3b	ENSMUST00000043775	protein_coding	principal1	18	1	34777047	6363
ENSMUSG00000067951	protein_coding	Vmn1r227	ENSMUST00000232943	protein_coding	principal1	17	1	20729843	4646
ENSMUSG00000067951	protein_coding	Vmn1r227	ENSMUST00000179914	protein_coding	principal1	17	1	20729843	4356
ENSMUSG00000039239	protein_coding	Tgfb2	ENSMUST00000193640	processed_transcript		1	-1	186704333	363
ENSMUSG00000067951	protein_coding	Vmn1r227	ENSMUST00000232844	processed_transcript		17	1	20729843	2456
ENSMUSG00000066643	protein_coding	Wdr35	ENSMUST00000161019	retained_intron		12	1	8974059	3941
ENSMUSG00000015575	protein_coding	Atp6v0e	ENSMUST00000236346	protein_coding		17	1	26663231	494
ENSMUSG00000067951	protein_coding	Vmn1r227	ENSMUST00000088829	retained_intron		17	1	20729870	6616
ENSMUSG00000039844	protein_coding	Rapgef1	ENSMUST00000095087	protein_coding	alternative2	2	1	29619720	6241
ENSMUSG00000066643	protein_coding	Wdr35	ENSMUST00000160873	retained_intron		12	1	8974869	656
ENSMUSG00000052137	protein_coding	Rbm12b2	ENSMUST00000063839	protein_coding	principal1	4	1	12089441	3327
ENSMUSG00000066643	protein_coding	Wdr35	ENSMUST00000159735	retained_intron		12	1	9022600	557
ENSMUSG00000100393	antisense	Gm29491	ENSMUST00000189481	antisense		1	1	186705695	506
ENSMUSG00000035004	protein_coding	Igsf6	ENSMUST00000047194	protein_coding	principal1	7	-1	121074572	2175
ENSMUSG00000038773	protein_coding	Kdm3b	ENSMUST00000225195	nonsense_mediated_decay		18	1	34777047	5723
ENSMUSG00000108617	antisense	Gm31749	ENSMUST00000206873	antisense		7	1	127031468	598
ENSMUSG00000015575	protein_coding	Atp6v0e	ENSMUST00000236867	protein_coding		17	1	26676157	772
ENSMUSG00000074199	protein_coding	Krtdap	ENSMUST00000189673	protein_coding		7	1	30787905	345
ENSMUSG00000060245	protein_coding	Vmn1r228	ENSMUST00000233605	protein_coding	principal1	17	-1	20786157	3740
ENSMUSG00000028907	protein_coding	Utp11	ENSMUST00000030738	protein_coding	principal1	4	-1	124693600	1603
ENSMUSG00000060245	protein_coding	Vmn1r228	ENSMUST00000232812	protein_coding	principal1	17	-1	20786157	3717
ENSMUSG00000109800	processed_pseudogene	Gm5130	ENSMUST00000210233	processed_pseudogene		7	1	10745268	959
ENSMUSG00000015575	protein_coding	Atp6v0e	ENSMUST00000015719	protein_coding	principal1	17	1	26676370	823
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000145179	processed_transcript		1	1	36307754	739
ENSMUSG00000030677	protein_coding	Kif22	ENSMUST00000205754	protein_coding		7	-1	127028957	518
ENSMUSG00000060245	protein_coding	Vmn1r228	ENSMUST00000233186	protein_coding	principal1	17	-1	20786157	3786
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000124280	retained_intron		1	1	36307754	3118
ENSMUSG00000060245	protein_coding	Vmn1r228	ENSMUST00000233164	protein_coding	principal1	17	-1	20786157	3763
ENSMUSG00000059206	protein_coding	Vmn1r71	ENSMUST00000079113	protein_coding	principal2	7	-1	10749538	4996
ENSMUSG00000038773	protein_coding	Kdm3b	ENSMUST00000224715	protein_coding		18	1	34777066	2032
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000097778	protein_coding	alternative2	1	1	36307754	2270
ENSMUSG00000028907	protein_coding	Utp11	ENSMUST00000153088	retained_intron		4	-1	124693534	4008
ENSMUSG00000059206	protein_coding	Vmn1r71	ENSMUST00000226874	protein_coding	principal2	7	-1	10754364	5194
ENSMUSG00000017003	protein_coding	Svs3a	ENSMUST00000017147	protein_coding	principal3	2	1	164289268	1191
ENSMUSG00000060245	protein_coding	Vmn1r228	ENSMUST00000072410	protein_coding	principal1	17	-1	20777501	1443
ENSMUSG00000039844	protein_coding	Rapgef1	ENSMUST00000091146	protein_coding	alternative2	2	1	29619741	6212
ENSMUSG00000038773	protein_coding	Kdm3b	ENSMUST00000225047	retained_intron		18	1	34777105	2638
ENSMUSG00000059206	protein_coding	Vmn1r71	ENSMUST00000227003	protein_coding	principal2	7	-1	10754364	5048
ENSMUSG00000038773	protein_coding	Kdm3b	ENSMUST00000225260	processed_transcript		18	1	34796895	3498
ENSMUSG00000038773	protein_coding	Kdm3b	ENSMUST00000224065	processed_transcript		18	1	34813557	42
ENSMUSG00000059206	protein_coding	Vmn1r71	ENSMUST00000228561	protein_coding	alternative2	7	-1	10754364	4747
ENSMUSG00000055681	protein_coding	Cope	ENSMUST00000066469	protein_coding	principal1	8	1	70302518	1300
ENSMUSG00000015575	protein_coding	Atp6v0e	ENSMUST00000236299	protein_coding		17	1	26676412	442
ENSMUSG00000059206	protein_coding	Vmn1r71	ENSMUST00000228248	protein_coding	principal2	7	-1	10754364	5469
ENSMUSG00000038773	protein_coding	Kdm3b	ENSMUST00000223567	processed_transcript		18	1	34825836	2997
ENSMUSG00000082334	processed_pseudogene	Gm13244	ENSMUST00000118855	processed_pseudogene		4	1	145745746	1446
ENSMUSG00000059206	protein_coding	Vmn1r71	ENSMUST00000228526	protein_coding	principal2	7	-1	10754364	5137
ENSMUSG00000015575	protein_coding	Atp6v0e	ENSMUST00000167352	protein_coding	principal1	17	1	26676412	2812
ENSMUSG00000083792	processed_pseudogene	Rpl12-ps2	ENSMUST00000121298	processed_pseudogene		11	-1	20290383	321
ENSMUSG00000074199	protein_coding	Krtdap	ENSMUST00000190990	protein_coding		7	1	30787905	403
ENSMUSG00000074199	protein_coding	Krtdap	ENSMUST00000189962	protein_coding		7	1	30787905	323
ENSMUSG00000059206	protein_coding	Vmn1r71	ENSMUST00000228098	protein_coding	principal2	7	-1	10754364	7165
ENSMUSG00000017003	protein_coding	Svs3a	ENSMUST00000109370	protein_coding	alternative2	2	1	164289270	1195
ENSMUSG00000059206	protein_coding	Vmn1r71	ENSMUST00000227940	protein_coding	principal2	7	-1	10754364	4725
ENSMUSG00000021782	protein_coding	Dlg5	ENSMUST00000042009	protein_coding		14	-1	24177789	6336
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000116629	nonsense_mediated_decay		1	1	36307754	2056
ENSMUSG00000059206	protein_coding	Vmn1r71	ENSMUST00000228374	protein_coding	principal2	7	-1	10754364	3717
ENSMUSG00000113813	lincRNA	Gm29968	ENSMUST00000222815	lincRNA		12	-1	26252545	1387
ENSMUSG00000055681	protein_coding	Cope	ENSMUST00000140363	retained_intron		8	1	70302741	1038
ENSMUSG00000074199	protein_coding	Krtdap	ENSMUST00000187493	protein_coding		7	1	30787905	420
ENSMUSG00000059206	protein_coding	Vmn1r71	ENSMUST00000227702	protein_coding	principal2	7	-1	10754364	5034
ENSMUSG00000039844	protein_coding	Rapgef1	ENSMUST00000102872	protein_coding	principal3	2	1	29619770	6402
ENSMUSG00000113115	lincRNA	4930480M12Rik	ENSMUST00000221084	lincRNA		12	1	26211267	550
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000115031	protein_coding		1	1	36307754	3002
ENSMUSG00000099368	unprocessed_pseudogene	Gm21910	ENSMUST00000191163	unprocessed_pseudogene		Y	1	66338549	696
ENSMUSG00000074199	protein_coding	Krtdap	ENSMUST00000098559	protein_coding	principal1	7	1	30787905	470
ENSMUSG00000069270	protein_coding	H2ac6	ENSMUST00000171127	protein_coding	principal1	13	-1	23683948	2482
ENSMUSG00000039844	protein_coding	Rapgef1	ENSMUST00000147755	protein_coding	alternative2	2	1	29619910	3908
ENSMUSG00000039844	protein_coding	Rapgef1	ENSMUST00000238899	protein_coding	alternative2	2	1	29643815	4205
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000115032	protein_coding	principal3	1	1	36307754	4640
ENSMUSG00000039844	protein_coding	Rapgef1	ENSMUST00000147488	protein_coding		2	1	29702482	4223
ENSMUSG00000074199	protein_coding	Krtdap	ENSMUST00000190589	retained_intron		7	1	30789802	369
ENSMUSG00000106946	TEC	Gm42856	ENSMUST00000200848	TEC		6	-1	24660369	2852
ENSMUSG00000055681	protein_coding	Cope	ENSMUST00000134822	retained_intron		8	1	70302769	2753
ENSMUSG00000115627	lincRNA	Gm41168	ENSMUST00000227051	lincRNA		14	1	61037960	880
ENSMUSG00000115627	lincRNA	Gm41168	ENSMUST00000227839	lincRNA		14	1	61063427	870
ENSMUSG00000055681	protein_coding	Cope	ENSMUST00000150968	protein_coding		8	1	70302773	715
ENSMUSG00000074199	protein_coding	Krtdap	ENSMUST00000186077	retained_intron		7	1	30789854	262
ENSMUSG00000039844	protein_coding	Rapgef1	ENSMUST00000137719	processed_transcript		2	1	29730593	683
ENSMUSG00000074199	protein_coding	Krtdap	ENSMUST00000188036	retained_intron		7	1	30790487	295
ENSMUSG00000030876	protein_coding	Mettl9	ENSMUST00000033163	protein_coding	principal1	7	1	121034445	1823
ENSMUSG00000055681	protein_coding	Cope	ENSMUST00000128822	retained_intron		8	1	70302793	2429
ENSMUSG00000039844	protein_coding	Rapgef1	ENSMUST00000123953	retained_intron		2	1	29732561	571
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000149490	retained_intron		8	-1	123254222	3233
ENSMUSG00000030677	protein_coding	Kif22	ENSMUST00000032915	protein_coding	principal1	7	-1	127042471	2115
ENSMUSG00000055681	protein_coding	Cope	ENSMUST00000168018	nonsense_mediated_decay		8	1	70302796	781
ENSMUSG00000059734	protein_coding	Ndufs8	ENSMUST00000236801	protein_coding	principal1	19	-1	3912488	1005
ENSMUSG00000030876	protein_coding	Mettl9	ENSMUST00000207332	processed_transcript		7	1	121035605	265
ENSMUSG00000118072	processed_pseudogene	Gm50101	ENSMUST00000235994	processed_pseudogene		19	1	27512508	772
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000137906	protein_coding		1	1	36307754	5504
ENSMUSG00000084973	lincRNA	Gm13848	ENSMUST00000211663	lincRNA		6	-1	31666124	1560
ENSMUSG00000055681	protein_coding	Cope	ENSMUST00000128003	protein_coding		8	1	70305698	837
ENSMUSG00000084973	lincRNA	Gm13848	ENSMUST00000211746	lincRNA		6	-1	31666042	1166
ENSMUSG00000030876	protein_coding	Mettl9	ENSMUST00000207351	protein_coding		7	1	121035611	740
ENSMUSG00000030677	protein_coding	Kif22	ENSMUST00000206655	retained_intron		7	-1	127028116	295
ENSMUSG00000030876	protein_coding	Mettl9	ENSMUST00000207835	retained_intron		7	1	121075287	3043
ENSMUSG00000055681	protein_coding	Cope	ENSMUST00000167850	protein_coding		8	1	70308507	433
ENSMUSG00000030677	protein_coding	Kif22	ENSMUST00000206924	retained_intron		7	-1	127032704	642
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000192874	retained_intron		1	1	36307758	5014
ENSMUSG00000084973	lincRNA	Gm13848	ENSMUST00000130777	lincRNA		6	-1	31666131	2047
ENSMUSG00000053358	TEC	Gm9905	ENSMUST00000065740	TEC		7	-1	121035096	1845
ENSMUSG00000108021	TEC	Gm44049	ENSMUST00000204905	TEC		6	-1	56944824	2984
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000115029	protein_coding		1	1	36307769	4329
ENSMUSG00000022754	protein_coding	Tmem45a	ENSMUST00000023435	protein_coding	principal1	16	-1	56886166	2701
ENSMUSG00000087379	lincRNA	Gm13849	ENSMUST00000153328	lincRNA		6	1	31786675	835
ENSMUSG00000108954	TEC	Gm44901	ENSMUST00000208157	TEC		7	1	121052345	3977
ENSMUSG00000030677	protein_coding	Kif22	ENSMUST00000206412	retained_intron		7	-1	127042409	3586
ENSMUSG00000071893	protein_coding	Vmn1r4	ENSMUST00000204739	retained_intron		6	1	56924015	2045
ENSMUSG00000107010	lincRNA	Gm43293	ENSMUST00000202780	lincRNA		6	-1	31706990	385
ENSMUSG00000032407	protein_coding	U2surp	ENSMUST00000079659	protein_coding	principal2	9	-1	95511894	7630
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000210190	lincRNA		6	1	31605190	1051
ENSMUSG00000071893	protein_coding	Vmn1r4	ENSMUST00000176838	protein_coding	principal1	6	1	56924022	2235
ENSMUSG00000037234	protein_coding	Hook3	ENSMUST00000037182	protein_coding	principal1	8	-1	26119224	12836
ENSMUSG00000022754	protein_coding	Tmem45a	ENSMUST00000148452	processed_transcript		16	-1	56811549	484
ENSMUSG00000109036	TEC	2210406H18Rik	ENSMUST00000207806	TEC		7	-1	121063959	1108
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000140218	retained_intron		1	1	36307779	425
ENSMUSG00000030677	protein_coding	Kif22	ENSMUST00000205806	protein_coding		7	-1	127042406	706
ENSMUSG00000071893	protein_coding	Vmn1r4	ENSMUST00000227073	protein_coding	principal1	6	1	56949332	1695
ENSMUSG00000022754	protein_coding	Tmem45a	ENSMUST00000232373	protein_coding		16	-1	56867715	471
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000147123	retained_intron		1	1	36315992	563
ENSMUSG00000109206	TEC	Gm45137	ENSMUST00000208652	TEC		7	1	121039138	4415
ENSMUSG00000049488	protein_coding	Tmem67	ENSMUST00000131145	nonsense_mediated_decay		4	-1	12087938	3533
ENSMUSG00000022754	protein_coding	Tmem45a	ENSMUST00000135672	protein_coding		16	-1	56831885	327
ENSMUSG00000037447	protein_coding	Arid5a	ENSMUST00000141121	retained_intron		1	1	36317027	400
ENSMUSG00000037234	protein_coding	Hook3	ENSMUST00000211683	protein_coding		8	-1	26035149	572
ENSMUSG00000071893	protein_coding	Vmn1r4	ENSMUST00000096612	protein_coding	principal1	6	1	56956466	1034
ENSMUSG00000037234	protein_coding	Hook3	ENSMUST00000147613	protein_coding		8	-1	26070238	701
ENSMUSG00000083613	processed_pseudogene	Pou2f3-rs1	ENSMUST00000120271	processed_pseudogene		1	-1	106888897	1046
ENSMUSG00000037234	protein_coding	Hook3	ENSMUST00000211777	retained_intron		8	-1	26040041	1954
ENSMUSG00000032407	protein_coding	U2surp	ENSMUST00000078374	protein_coding		9	-1	95511996	3520
ENSMUSG00000021500	protein_coding	Ddx46	ENSMUST00000223736	protein_coding	principal1	13	1	55635051	5612
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000124919	lincRNA		6	1	31605211	451
ENSMUSG00000090346	protein_coding	Vmn1r5	ENSMUST00000226130	protein_coding	principal1	6	1	56970273	3393
ENSMUSG00000037234	protein_coding	Hook3	ENSMUST00000152144	retained_intron		8	-1	26044570	448
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000149613	lincRNA		6	1	31605289	526
ENSMUSG00000059734	protein_coding	Ndufs8	ENSMUST00000075092	protein_coding	principal1	19	-1	3912734	983
ENSMUSG00000090346	protein_coding	Vmn1r5	ENSMUST00000228276	protein_coding	principal1	6	1	56970273	3188
ENSMUSG00000021500	protein_coding	Ddx46	ENSMUST00000231097	protein_coding		13	1	55669764	432
ENSMUSG00000084999	antisense	Gm15839	ENSMUST00000138684	antisense		16	1	56886367	612
ENSMUSG00000037234	protein_coding	Hook3	ENSMUST00000210172	processed_transcript		8	-1	26067918	520
ENSMUSG00000037234	protein_coding	Hook3	ENSMUST00000209996	retained_intron		8	-1	26073581	2332
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000139483	lincRNA		6	1	31651041	462
ENSMUSG00000084999	antisense	Gm15839	ENSMUST00000211219	antisense		16	1	56886578	664
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000209254	lincRNA		6	1	31651042	580
ENSMUSG00000037234	protein_coding	Hook3	ENSMUST00000210860	retained_intron		8	-1	26076941	3522
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000209659	lincRNA		6	1	31663892	1165
ENSMUSG00000037234	protein_coding	Hook3	ENSMUST00000211292	processed_transcript		8	-1	26079377	2813
ENSMUSG00000021500	protein_coding	Ddx46	ENSMUST00000172272	protein_coding	principal1	13	1	55635027	5676
ENSMUSG00000083467	processed_pseudogene	Gm15840	ENSMUST00000122099	processed_pseudogene		16	-1	56910053	943
ENSMUSG00000090346	protein_coding	Vmn1r5	ENSMUST00000164307	protein_coding	principal1	6	1	56985295	1056
ENSMUSG00000059734	protein_coding	Ndufs8	ENSMUST00000237341	protein_coding	principal1	19	-1	3912774	780
ENSMUSG00000094311	protein_coding	Rfpl4b	ENSMUST00000179279	protein_coding	principal1	10	-1	38821779	1054
ENSMUSG00000030802	protein_coding	Bckdk	ENSMUST00000071056	protein_coding	principal1	7	1	127904082	3405
ENSMUSG00000021500	protein_coding	Ddx46	ENSMUST00000099479	protein_coding		13	1	55635027	5664
ENSMUSG00000059734	protein_coding	Ndufs8	ENSMUST00000235847	protein_coding	principal1	19	-1	3912734	977
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000136224	lincRNA		6	1	31666178	786
ENSMUSG00000109588	protein_coding	Lnp1	ENSMUST00000210579	protein_coding	principal1	16	-1	56928061	671
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000209571	lincRNA		6	1	31666215	1034
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000209658	lincRNA		6	1	31666248	1442
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000209562	lincRNA		6	1	31666274	1884
ENSMUSG00000037234	protein_coding	Hook3	ENSMUST00000209542	retained_intron		8	-1	26092282	5279
ENSMUSG00000095304	protein_coding	Plac9a	ENSMUST00000052286	protein_coding	principal1	14	-1	25903100	1555
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000211225	lincRNA		6	1	31666278	1420
ENSMUSG00000021782	protein_coding	Dlg5	ENSMUST00000073687	protein_coding		14	-1	24245920	7784
ENSMUSG00000025035	protein_coding	Arl3	ENSMUST00000026009	protein_coding	principal1	19	-1	46573093	843
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000210387	lincRNA		6	1	31666278	1121
ENSMUSG00000032407	protein_coding	U2surp	ENSMUST00000191213	nonsense_mediated_decay		9	-1	95511995	3231
ENSMUSG00000112650	processed_pseudogene	Gm5184	ENSMUST00000220417	processed_pseudogene		12	1	56189414	1702
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000210892	lincRNA		6	1	31703192	795
ENSMUSG00000059734	protein_coding	Ndufs8	ENSMUST00000235301	protein_coding		19	-1	3912768	388
ENSMUSG00000086804	lincRNA	Gm43154	ENSMUST00000210985	lincRNA		6	1	31719381	932
ENSMUSG00000030802	protein_coding	Bckdk	ENSMUST00000146574	retained_intron		7	1	127904103	827
ENSMUSG00000025035	protein_coding	Arl3	ENSMUST00000236255	protein_coding		19	-1	46573198	1005
ENSMUSG00000111952	lincRNA	Gm4489	ENSMUST00000219576	lincRNA		10	1	122119700	517
ENSMUSG00000030802	protein_coding	Bckdk	ENSMUST00000151451	protein_coding		7	1	127904640	934
ENSMUSG00000032407	protein_coding	U2surp	ENSMUST00000217176	protein_coding	alternative1	9	-1	95511885	3111
ENSMUSG00000115635	lincRNA	Gm49271	ENSMUST00000227040	lincRNA		15	-1	43377673	755
ENSMUSG00000100047	unprocessed_pseudogene	Gm28141	ENSMUST00000186676	unprocessed_pseudogene		Y	1	8517395	342
ENSMUSG00000095304	protein_coding	Plac9a	ENSMUST00000183431	protein_coding		14	-1	25902474	536
ENSMUSG00000101858	unprocessed_pseudogene	Gm28144	ENSMUST00000188351	unprocessed_pseudogene		Y	-1	8570756	699
ENSMUSG00000116866	processed_pseudogene	Gm8938	ENSMUST00000232096	processed_pseudogene		16	1	56981703	1135
ENSMUSG00000032407	protein_coding	U2surp	ENSMUST00000186139	retained_intron		9	-1	95482244	3858
ENSMUSG00000095304	protein_coding	Plac9a	ENSMUST00000183725	protein_coding		14	-1	25902476	439
ENSMUSG00000026986	protein_coding	Hnmt	ENSMUST00000051416	protein_coding	principal1	2	-1	24049394	1656
ENSMUSG00000025035	protein_coding	Arl3	ENSMUST00000236067	processed_transcript		19	-1	46558392	865
ENSMUSG00000074440	protein_coding	Defa3	ENSMUST00000098893	protein_coding	principal1	8	1	21287409	410
ENSMUSG00000030802	protein_coding	Bckdk	ENSMUST00000124533	protein_coding		7	1	127904762	1792
ENSMUSG00000110439	protein_coding	Mup22	ENSMUST00000211875	protein_coding	principal1	4	-1	60821463	861
ENSMUSG00000100933	unprocessed_pseudogene	Gm28143	ENSMUST00000191082	unprocessed_pseudogene		Y	1	8590448	109
ENSMUSG00000030802	protein_coding	Bckdk	ENSMUST00000206745	protein_coding		7	1	127904762	1702
ENSMUSG00000025035	protein_coding	Arl3	ENSMUST00000235540	processed_transcript		19	-1	46542813	558
ENSMUSG00000021782	protein_coding	Dlg5	ENSMUST00000090398	protein_coding	principal1	14	-1	24245920	7851
ENSMUSG00000100804	unprocessed_pseudogene	Gm28150	ENSMUST00000187305	unprocessed_pseudogene		Y	-1	8602724	614
ENSMUSG00000032407	protein_coding	U2surp	ENSMUST00000185515	protein_coding		9	-1	95511859	612
ENSMUSG00000025035	protein_coding	Arl3	ENSMUST00000238076	retained_intron		19	-1	46558392	766
ENSMUSG00000024776	protein_coding	Stambpl1	ENSMUST00000239240	protein_coding	principal1	19	1	34192229	1988
ENSMUSG00000104513	processed_pseudogene	Gm29813	ENSMUST00000195856	processed_pseudogene		6	-1	41494967	447
ENSMUSG00000025035	protein_coding	Arl3	ENSMUST00000235489	processed_transcript		19	-1	46573076	1104
ENSMUSG00000026986	protein_coding	Hnmt	ENSMUST00000114498	protein_coding	principal1	2	-1	24049079	1632
ENSMUSG00000030802	protein_coding	Bckdk	ENSMUST00000206140	protein_coding		7	1	127904917	664
ENSMUSG00000032407	protein_coding	U2surp	ENSMUST00000190019	protein_coding		9	-1	95511856	231
ENSMUSG00000111431	processed_pseudogene	Gm17779	ENSMUST00000213395	processed_pseudogene		10	1	38928289	394
ENSMUSG00000105016	processed_pseudogene	Gm42569	ENSMUST00000200539	processed_pseudogene		5	-1	72172288	472
ENSMUSG00000024776	protein_coding	Stambpl1	ENSMUST00000054956	protein_coding	principal1	19	1	34192229	2024
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000108300	protein_coding	principal3	3	-1	27153861	4086
ENSMUSG00000018102	protein_coding	H2bc4	ENSMUST00000018246	protein_coding	principal1	13	1	23684199	1156
ENSMUSG00000021782	protein_coding	Dlg5	ENSMUST00000170112	nonsense_mediated_decay		14	-1	24150546	892
ENSMUSG00000030802	protein_coding	Bckdk	ENSMUST00000206068	protein_coding		7	1	127907240	724
ENSMUSG00000037428	protein_coding	Vgf	ENSMUST00000190827	protein_coding	principal1	5	1	137026392	2834
ENSMUSG00000032407	protein_coding	U2surp	ENSMUST00000186076	retained_intron		9	-1	95511885	650
ENSMUSG00000117662	processed_transcript	Gm4013	ENSMUST00000236263	bidirectional_promoter_lncRNA		18	-1	42275197	414
ENSMUSG00000024776	protein_coding	Stambpl1	ENSMUST00000129535	protein_coding		19	1	34192822	484
ENSMUSG00000032407	protein_coding	U2surp	ENSMUST00000188017	retained_intron		9	-1	95511879	2846
ENSMUSG00000025497	protein_coding	Cdhr5	ENSMUST00000080654	protein_coding	principal3	7	-1	141276774	2133
ENSMUSG00000026986	protein_coding	Hnmt	ENSMUST00000114497	protein_coding	principal1	2	-1	24048866	994
ENSMUSG00000117662	processed_transcript	Gm4013	ENSMUST00000236054	retained_intron		18	-1	42275178	792
ENSMUSG00000021782	protein_coding	Dlg5	ENSMUST00000164638	retained_intron		14	-1	24148764	748
ENSMUSG00000037428	protein_coding	Vgf	ENSMUST00000186451	protein_coding	principal1	5	1	137030364	2277
ENSMUSG00000101037	antisense	Gm28424	ENSMUST00000187393	antisense		9	1	95512151	1319
ENSMUSG00000102616	processed_pseudogene	Gm37841	ENSMUST00000195367	processed_pseudogene		6	1	41496929	376
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000108298	protein_coding	alternative1	3	-1	27153878	4024
ENSMUSG00000104549	processed_pseudogene	Gm43142	ENSMUST00000198670	processed_pseudogene		5	1	25710226	361
ENSMUSG00000021782	protein_coding	Dlg5	ENSMUST00000167343	retained_intron		14	-1	24157265	742
ENSMUSG00000024776	protein_coding	Stambpl1	ENSMUST00000125232	retained_intron		19	1	34217434	4234
ENSMUSG00000110827	lincRNA	Gm32281	ENSMUST00000213295	lincRNA		9	1	95554497	320
ENSMUSG00000037428	protein_coding	Vgf	ENSMUST00000187382	protein_coding		5	1	137030701	581
ENSMUSG00000021782	protein_coding	Dlg5	ENSMUST00000169880	protein_coding		14	-1	24244865	614
ENSMUSG00000017832	protein_coding	Hspb9	ENSMUST00000017976	protein_coding	alternative2	11	1	100713922	652
ENSMUSG00000024776	protein_coding	Stambpl1	ENSMUST00000119603	protein_coding	principal1	19	1	34217624	1664
ENSMUSG00000110827	lincRNA	Gm32281	ENSMUST00000217220	lincRNA		9	1	95557232	691
ENSMUSG00000118519	antisense	AC163638.2	ENSMUST00000238857	antisense		14	1	24082121	1190
ENSMUSG00000026235	protein_coding	Epha4	ENSMUST00000188952	nonsense_mediated_decay		1	-1	77515079	6315
ENSMUSG00000037428	protein_coding	Vgf	ENSMUST00000041543	protein_coding	principal1	5	1	137030295	2553
ENSMUSG00000017832	protein_coding	Hspb9	ENSMUST00000169833	protein_coding	principal2	11	1	100713850	726
ENSMUSG00000074439	protein_coding	Defa5	ENSMUST00000098892	protein_coding	principal1	8	1	21297439	376
ENSMUSG00000024776	protein_coding	Stambpl1	ENSMUST00000130756	processed_transcript		19	1	34232706	493
ENSMUSG00000114880	TEC	Gm49098	ENSMUST00000224920	TEC		14	-1	24170986	827
ENSMUSG00000048996	protein_coding	Olfr1366	ENSMUST00000205976	protein_coding	alternative2	13	-1	21542775	3112
ENSMUSG00000085759	antisense	1700061E18Rik	ENSMUST00000154159	antisense		13	1	41800783	588
ENSMUSG00000099672	antisense	Gm28564	ENSMUST00000190864	antisense		13	1	41843014	240
ENSMUSG00000105005	processed_pseudogene	Gm9729	ENSMUST00000196364	processed_pseudogene		6	-1	67883610	265
ENSMUSG00000025497	protein_coding	Cdhr5	ENSMUST00000167263	protein_coding	alternative2	7	-1	141276786	2628
ENSMUSG00000048996	protein_coding	Olfr1366	ENSMUST00000175637	protein_coding	alternative2	13	-1	21542808	3045
ENSMUSG00000109820	processed_pseudogene	Gm45654	ENSMUST00000210980	processed_pseudogene		8	-1	37401020	123
ENSMUSG00000083251	unprocessed_pseudogene	Gm15300	ENSMUST00000122324	unprocessed_pseudogene		8	1	21309162	279
ENSMUSG00000086422	processed_pseudogene	4930421P07Rik	ENSMUST00000147322	processed_pseudogene		5	1	38575031	399
ENSMUSG00000026235	protein_coding	Epha4	ENSMUST00000188797	protein_coding	principal1	1	-1	77515088	3612
ENSMUSG00000025497	protein_coding	Cdhr5	ENSMUST00000210773	nonsense_mediated_decay		7	-1	141272846	554
ENSMUSG00000048996	protein_coding	Olfr1366	ENSMUST00000168629	protein_coding	alternative2	13	-1	21538027	1054
ENSMUSG00000040841	protein_coding	Six5	ENSMUST00000049454	protein_coding	principal1	7	1	19094594	3007
ENSMUSG00000048996	protein_coding	Olfr1366	ENSMUST00000218154	protein_coding	principal2	13	-1	21538027	1054
ENSMUSG00000064225	protein_coding	Paqr9	ENSMUST00000079597	protein_coding	principal1	9	1	95559657	8367
ENSMUSG00000026235	protein_coding	Epha4	ENSMUST00000187346	protein_coding		1	-1	77377607	614
ENSMUSG00000025497	protein_coding	Cdhr5	ENSMUST00000210124	protein_coding		7	-1	141273735	1001
ENSMUSG00000094345	IG_V_gene	Igkv14-126	ENSMUST00000103310	IG_V_gene	principal1	6	1	67896172	358
ENSMUSG00000025497	protein_coding	Cdhr5	ENSMUST00000210386	retained_intron		7	-1	141274176	755
ENSMUSG00000053182	protein_coding	Gm609	ENSMUST00000144346	processed_transcript		16	-1	45454978	3163
ENSMUSG00000083292	processed_pseudogene	Gm12010	ENSMUST00000122400	processed_pseudogene		11	1	15482306	2017
ENSMUSG00000072946	protein_coding	Ptgr2	ENSMUST00000123614	protein_coding	principal1	12	1	84285232	3168
ENSMUSG00000036211	protein_coding	H1f6	ENSMUST00000041052	protein_coding	principal1	13	1	23695814	912
ENSMUSG00000095737	IG_V_gene	Igkv11-125	ENSMUST00000197406	IG_V_gene	principal5	6	1	67913573	353
ENSMUSG00000104323	TEC	Gm37319	ENSMUST00000193500	TEC		11	1	16037793	636
ENSMUSG00000095737	IG_V_gene	Igkv11-125	ENSMUST00000103311	IG_V_gene	alternative2	6	1	67913573	350
ENSMUSG00000082410	processed_pseudogene	Gm12011	ENSMUST00000119734	processed_pseudogene		11	1	16236929	618
ENSMUSG00000072946	protein_coding	Ptgr2	ENSMUST00000135001	protein_coding		12	1	84285400	1286
ENSMUSG00000026235	protein_coding	Epha4	ENSMUST00000190149	nonsense_mediated_decay		1	-1	77515079	3043
ENSMUSG00000096632	IG_V_gene	Igkv9-124	ENSMUST00000196768	IG_V_gene		6	-1	67942540	353
ENSMUSG00000054890	protein_coding	Olfr1535	ENSMUST00000217519	protein_coding	principal1	13	-1	21559893	3959
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000184113	nonsense_mediated_decay		3	-1	27153850	3935
ENSMUSG00000049488	protein_coding	Tmem67	ENSMUST00000108293	protein_coding	alternative2	4	-1	12090020	3945
ENSMUSG00000096632	IG_V_gene	Igkv9-124	ENSMUST00000103312	IG_V_gene	principal1	6	-1	67942360	287
ENSMUSG00000053182	protein_coding	Gm609	ENSMUST00000232138	protein_coding		16	-1	45492881	1695
ENSMUSG00000054890	protein_coding	Olfr1535	ENSMUST00000068163	protein_coding	principal1	13	-1	21556020	981
ENSMUSG00000086248	processed_transcript	Gm16127	ENSMUST00000131619	processed_transcript		9	-1	95638265	234
ENSMUSG00000026235	protein_coding	Epha4	ENSMUST00000189934	retained_intron		1	-1	77515085	3466
ENSMUSG00000060678	protein_coding	H4c3	ENSMUST00000102967	protein_coding	principal1	13	-1	23698454	820
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000150061	nonsense_mediated_decay		3	-1	27117807	687
ENSMUSG00000100825	processed_pseudogene	Itpa-ps2	ENSMUST00000188629	processed_pseudogene		9	-1	95676017	589
ENSMUSG00000026235	protein_coding	Epha4	ENSMUST00000186930	protein_coding		1	-1	77515083	584
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000176908	retained_intron		3	-1	27122692	797
ENSMUSG00000026235	protein_coding	Epha4	ENSMUST00000027451	protein_coding	principal1	1	-1	77515088	6328
ENSMUSG00000053182	protein_coding	Gm609	ENSMUST00000114585	protein_coding	principal1	16	-1	45492969	2122
ENSMUSG00000086585	antisense	Gm16126	ENSMUST00000126025	antisense		9	-1	95648471	589
ENSMUSG00000039156	protein_coding	Stim2	ENSMUST00000117661	protein_coding	principal2	5	1	53998499	4934
ENSMUSG00000108862	processed_pseudogene	Gm17991	ENSMUST00000208139	processed_pseudogene		7	1	107068766	297
ENSMUSG00000080715	processed_pseudogene	Gm5406	ENSMUST00000120054	processed_pseudogene		16	1	45411580	766
ENSMUSG00000039156	protein_coding	Stim2	ENSMUST00000201469	protein_coding	alternative2	5	1	53998565	4892
ENSMUSG00000110236	antisense	Gm40493	ENSMUST00000210223	antisense		8	1	38659763	400
ENSMUSG00000114748	processed_pseudogene	Gm6734	ENSMUST00000225926	processed_pseudogene		14	1	14371648	601
ENSMUSG00000072946	protein_coding	Ptgr2	ENSMUST00000123693	nonsense_mediated_decay		12	1	84285413	1386
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000108296	retained_intron		3	-1	27153812	2228
ENSMUSG00000081303	processed_pseudogene	Gm16011	ENSMUST00000121567	processed_pseudogene		16	-1	45429506	2662
ENSMUSG00000049488	protein_coding	Tmem67	ENSMUST00000146140	retained_intron		4	-1	12088007	3278
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000124727	retained_intron		3	-1	27137136	554
ENSMUSG00000039156	protein_coding	Stim2	ENSMUST00000200873	processed_transcript		5	1	54074737	553
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000196926	retained_intron		3	-1	27147201	565
ENSMUSG00000049488	protein_coding	Tmem67	ENSMUST00000147746	retained_intron		4	-1	12087927	1517
ENSMUSG00000039156	protein_coding	Stim2	ENSMUST00000201198	protein_coding		5	1	54105368	2338
ENSMUSG00000038418	protein_coding	Egr1	ENSMUST00000064795	protein_coding	principal1	18	1	34859823	4484
ENSMUSG00000049488	protein_coding	Tmem67	ENSMUST00000151859	retained_intron		4	-1	12087932	1688
ENSMUSG00000039156	protein_coding	Stim2	ENSMUST00000202342	retained_intron		5	1	54115857	652
ENSMUSG00000033379	protein_coding	Atp6v0b	ENSMUST00000036380	protein_coding	principal1	4	-1	117887329	1000
ENSMUSG00000107105	processed_pseudogene	Gm15820	ENSMUST00000201566	processed_pseudogene		5	-1	54095080	728
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000176780	protein_coding		3	-1	27153854	683
ENSMUSG00000049488	protein_coding	Tmem67	ENSMUST00000050686	protein_coding	principal2	4	-1	12087957	3456
ENSMUSG00000039539	protein_coding	Sgcz	ENSMUST00000135764	nonsense_mediated_decay		8	-1	38661508	3027
ENSMUSG00000038418	protein_coding	Egr1	ENSMUST00000165033	protein_coding	principal1	18	1	34861207	3036
ENSMUSG00000085467	antisense	Gm11842	ENSMUST00000130117	antisense		4	1	12027505	556
ENSMUSG00000033379	protein_coding	Atp6v0b	ENSMUST00000133530	retained_intron		4	-1	117885894	646
ENSMUSG00000072946	protein_coding	Ptgr2	ENSMUST00000138733	retained_intron		12	1	84285365	2424
ENSMUSG00000109258	lincRNA	5330413D20Rik	ENSMUST00000208649	lincRNA		8	-1	10676913	1416
ENSMUSG00000039539	protein_coding	Sgcz	ENSMUST00000118896	protein_coding	principal1	8	-1	38661508	2389
ENSMUSG00000033379	protein_coding	Atp6v0b	ENSMUST00000150204	protein_coding		4	-1	117887320	935
ENSMUSG00000072946	protein_coding	Ptgr2	ENSMUST00000147363	protein_coding		12	1	84285374	1869
ENSMUSG00000109503	lincRNA	Gm44786	ENSMUST00000208165	lincRNA		8	1	10685351	1008
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000176535	protein_coding		3	-1	27153828	712
ENSMUSG00000094529	unprocessed_pseudogene	Gm21744	ENSMUST00000178403	unprocessed_pseudogene		Y	1	32380225	662
ENSMUSG00000081316	processed_pseudogene	Gm16205	ENSMUST00000117720	processed_pseudogene		8	-1	37788692	1027
ENSMUSG00000033379	protein_coding	Atp6v0b	ENSMUST00000152356	retained_intron		4	-1	117885800	560
ENSMUSG00000109432	lincRNA	Gm44785	ENSMUST00000207379	lincRNA		8	1	10687948	620
ENSMUSG00000081517	processed_pseudogene	Gm16204	ENSMUST00000117864	processed_pseudogene		8	1	38076714	1897
ENSMUSG00000015354	protein_coding	Pcolce2	ENSMUST00000015498	protein_coding	principal1	9	1	95637601	4438
ENSMUSG00000114359	processed_pseudogene	Gm47816	ENSMUST00000224833	processed_pseudogene		13	-1	55254401	368
ENSMUSG00000033379	protein_coding	Atp6v0b	ENSMUST00000124974	retained_intron		4	-1	117886636	779
ENSMUSG00000033379	protein_coding	Atp6v0b	ENSMUST00000149868	protein_coding		4	-1	117886558	547
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000177055	protein_coding		3	-1	27153810	675
ENSMUSG00000109432	lincRNA	Gm44785	ENSMUST00000208294	lincRNA		8	1	10690166	932
ENSMUSG00000072946	protein_coding	Ptgr2	ENSMUST00000146377	protein_coding	principal1	12	1	84285406	2073
ENSMUSG00000101745	lincRNA	Gm28764	ENSMUST00000191194	lincRNA		Y	-1	32497636	1498
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000175857	protein_coding		3	-1	27153782	589
ENSMUSG00000025060	protein_coding	Slk	ENSMUST00000026043	protein_coding	alternative2	19	1	47579678	7278
ENSMUSG00000033379	protein_coding	Atp6v0b	ENSMUST00000132073	protein_coding		4	-1	117887287	872
ENSMUSG00000015354	protein_coding	Pcolce2	ENSMUST00000151210	processed_transcript		9	1	95680306	623
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000143549	nonsense_mediated_decay		17	1	31386257	1718
ENSMUSG00000101936	processed_pseudogene	Gm28164	ENSMUST00000190143	processed_pseudogene		9	-1	95622419	442
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000131417	nonsense_mediated_decay		17	1	31386257	1762
ENSMUSG00000072946	protein_coding	Ptgr2	ENSMUST00000128158	retained_intron		12	1	84285381	656
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000134525	protein_coding	alternative2	17	1	31386257	1810
ENSMUSG00000033379	protein_coding	Atp6v0b	ENSMUST00000136596	protein_coding		4	-1	117887333	348
ENSMUSG00000027699	protein_coding	Ect2	ENSMUST00000176242	protein_coding	alternative1	3	-1	27153854	3985
ENSMUSG00000072946	protein_coding	Ptgr2	ENSMUST00000128541	processed_transcript		12	1	84285384	699
ENSMUSG00000101745	lincRNA	Gm28764	ENSMUST00000187813	lincRNA		Y	-1	32497184	437
ENSMUSG00000101745	lincRNA	Gm28764	ENSMUST00000188462	lincRNA		Y	-1	32497184	621
ENSMUSG00000072946	protein_coding	Ptgr2	ENSMUST00000150720	processed_transcript		12	1	84285399	628
ENSMUSG00000033379	protein_coding	Atp6v0b	ENSMUST00000147845	protein_coding		4	-1	117887327	776
ENSMUSG00000025198	protein_coding	Erlin1	ENSMUST00000170801	protein_coding	principal1	19	-1	44069526	3172
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000231621	protein_coding	principal3	16	1	18498713	1485
ENSMUSG00000085278	antisense	Gm12841	ENSMUST00000128263	antisense		4	1	117883621	338
ENSMUSG00000030699	protein_coding	Tbx6	ENSMUST00000172352	protein_coding		7	1	126781483	1529
ENSMUSG00000038122	protein_coding	Tbc1d32	ENSMUST00000099739	protein_coding	principal1	10	-1	56228689	7240
ENSMUSG00000059956	protein_coding	Serpinb12	ENSMUST00000081277	protein_coding	principal1	1	1	106934449	1689
ENSMUSG00000025060	protein_coding	Slk	ENSMUST00000051691	protein_coding	principal3	19	1	47580019	4239
ENSMUSG00000085272	protein_coding	Sbk3	ENSMUST00000144863	protein_coding	principal2	7	-1	4970961	3152
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000000904	nonsense_mediated_decay		16	1	18498784	1412
ENSMUSG00000059956	protein_coding	Serpinb12	ENSMUST00000112724	protein_coding	principal1	1	1	106938953	1623
ENSMUSG00000085502	lincRNA	Gm12320	ENSMUST00000127333	lincRNA		11	-1	70755151	1182
ENSMUSG00000025198	protein_coding	Erlin1	ENSMUST00000112028	protein_coding	principal1	19	-1	44069785	3136
ENSMUSG00000046572	protein_coding	Zfp518b	ENSMUST00000057258	protein_coding	principal1	5	-1	38684750	6804
ENSMUSG00000021207	protein_coding	Akr1c21	ENSMUST00000021628	protein_coding	principal1	13	1	4574075	1207
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000139625	protein_coding		16	1	18498823	404
ENSMUSG00000085272	protein_coding	Sbk3	ENSMUST00000133272	protein_coding	alternative2	7	-1	4971168	1086
ENSMUSG00000090468	processed_pseudogene	Gm2840	ENSMUST00000048361	processed_pseudogene		5	1	96173940	411
ENSMUSG00000025060	protein_coding	Slk	ENSMUST00000123816	retained_intron		19	1	47620670	792
ENSMUSG00000025198	protein_coding	Erlin1	ENSMUST00000172041	protein_coding		19	-1	44069756	654
ENSMUSG00000030699	protein_coding	Tbx6	ENSMUST00000094037	protein_coding	principal1	7	1	126781483	1727
ENSMUSG00000025198	protein_coding	Erlin1	ENSMUST00000171952	nonsense_mediated_decay		19	-1	44069395	332
ENSMUSG00000031799	protein_coding	Tpm4	ENSMUST00000123177	processed_transcript		8	1	72130174	1803
ENSMUSG00000025060	protein_coding	Slk	ENSMUST00000130115	retained_intron		19	1	47622658	587
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000129952	processed_transcript		16	1	18498878	375
ENSMUSG00000025060	protein_coding	Slk	ENSMUST00000239141	protein_coding		19	1	47627648	295
ENSMUSG00000025198	protein_coding	Erlin1	ENSMUST00000172262	protein_coding		19	-1	44067683	178
ENSMUSG00000059956	protein_coding	Serpinb12	ENSMUST00000126812	retained_intron		1	1	106938955	1263
ENSMUSG00000082983	processed_pseudogene	Gm12318	ENSMUST00000121235	processed_pseudogene		11	-1	70762379	273
ENSMUSG00000046572	protein_coding	Zfp518b	ENSMUST00000180214	protein_coding		5	-1	38684826	1124
ENSMUSG00000025060	protein_coding	Slk	ENSMUST00000147841	retained_intron		19	1	47635130	581
ENSMUSG00000025198	protein_coding	Erlin1	ENSMUST00000170577	retained_intron		19	-1	44069744	2083
ENSMUSG00000029684	protein_coding	Wasl	ENSMUST00000031695	protein_coding	principal1	6	-1	24665009	4352
ENSMUSG00000098138	processed_pseudogene	Gm9081	ENSMUST00000182346	processed_pseudogene		10	1	122169373	991
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000149035	protein_coding		16	1	18498886	453
ENSMUSG00000021207	protein_coding	Akr1c21	ENSMUST00000223285	nonsense_mediated_decay		13	1	4574075	1303
ENSMUSG00000025198	protein_coding	Erlin1	ENSMUST00000168602	retained_intron		19	-1	44069696	441
ENSMUSG00000046572	protein_coding	Zfp518b	ENSMUST00000178760	protein_coding		5	-1	38684757	425
ENSMUSG00000029684	protein_coding	Wasl	ENSMUST00000201867	retained_intron		6	-1	24628073	1411
ENSMUSG00000025198	protein_coding	Erlin1	ENSMUST00000169092	protein_coding		19	-1	44069690	172
ENSMUSG00000046572	protein_coding	Zfp518b	ENSMUST00000179555	protein_coding	principal1	5	-1	38684826	6816
ENSMUSG00000021207	protein_coding	Akr1c21	ENSMUST00000137279	retained_intron		13	1	4577157	681
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000167778	protein_coding	alternative2	16	1	18498886	3592
ENSMUSG00000028555	protein_coding	Ttc39a	ENSMUST00000124209	protein_coding		4	1	109406623	672
ENSMUSG00000101672	processed_pseudogene	Gm28149	ENSMUST00000187102	processed_pseudogene		Y	-1	8612475	378
ENSMUSG00000025198	protein_coding	Erlin1	ENSMUST00000071698	protein_coding	principal1	19	-1	44069775	3228
ENSMUSG00000060548	protein_coding	Tnfrsf19	ENSMUST00000111236	protein_coding	principal2	14	-1	61037950	3958
ENSMUSG00000105996	TEC	Gm43219	ENSMUST00000197972	TEC		5	1	5696858	1937
ENSMUSG00000029684	protein_coding	Wasl	ENSMUST00000041737	protein_coding		6	-1	24664988	1298
ENSMUSG00000117461	sense_overlapping	Gm50081	ENSMUST00000234996	sense_overlapping		18	1	6788768	236
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000166793	protein_coding	principal1	18	1	35562158	6262
ENSMUSG00000076512	IG_V_gene	Igkv9-123	ENSMUST00000103313	IG_V_gene	principal1	6	-1	67954714	377
ENSMUSG00000058022	protein_coding	Adtrp	ENSMUST00000072012	protein_coding	principal3	13	-1	41847488	2440
ENSMUSG00000099929	unprocessed_pseudogene	Gm28098	ENSMUST00000191361	unprocessed_pseudogene		Y	-1	8636232	699
ENSMUSG00000038122	protein_coding	Tbc1d32	ENSMUST00000219385	retained_intron		10	-1	56228689	4192
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000090086	protein_coding	principal3	16	1	18498888	3549
ENSMUSG00000043602	protein_coding	Zfp3	ENSMUST00000060444	protein_coding	principal1	11	1	70764209	2061
ENSMUSG00000117461	sense_overlapping	Gm50081	ENSMUST00000234748	sense_overlapping		18	1	6791067	249
ENSMUSG00000038122	protein_coding	Tbc1d32	ENSMUST00000217792	retained_intron		10	-1	56156923	2761
ENSMUSG00000099939	unprocessed_pseudogene	Gm28330	ENSMUST00000190353	unprocessed_pseudogene		Y	-1	8654329	171
ENSMUSG00000029684	protein_coding	Wasl	ENSMUST00000173399	processed_transcript		6	-1	24664938	448
ENSMUSG00000045091	protein_coding	Aqp12	ENSMUST00000059676	protein_coding	principal1	1	1	93006334	1088
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000115601	protein_coding	alternative2	16	1	18498888	3507
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000236454	protein_coding		17	1	31386257	1640
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000237780	protein_coding		18	1	35562192	555
ENSMUSG00000060548	protein_coding	Tnfrsf19	ENSMUST00000111234	protein_coding	principal2	14	-1	61046469	4051
ENSMUSG00000109747	processed_pseudogene	Gm45438	ENSMUST00000210242	processed_pseudogene		7	-1	10780718	564
ENSMUSG00000095497	IG_V_gene	Igkv1-122	ENSMUST00000103314	IG_V_gene	principal1	6	1	68016718	383
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000124924	processed_transcript		16	1	18498891	358
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000236077	nonsense_mediated_decay		17	1	31386257	1755
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000236874	nonsense_mediated_decay		17	1	31386257	1599
ENSMUSG00000100491	lincRNA	Gm28331	ENSMUST00000191102	lincRNA		Y	1	8675892	621
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000238091	protein_coding		17	1	31386257	1555
ENSMUSG00000047669	protein_coding	Msl3l2	ENSMUST00000063138	protein_coding	principal1	10	1	56106917	2140
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000236850	nonsense_mediated_decay		17	1	31386257	1817
ENSMUSG00000116542	protein_coding	Gm17783	ENSMUST00000232600	protein_coding	principal1	16	-1	45532050	1082
ENSMUSG00000029723	protein_coding	Tsc22d4	ENSMUST00000100540	protein_coding		5	1	137745730	2730
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000147739	protein_coding		16	1	18498897	637
ENSMUSG00000060548	protein_coding	Tnfrsf19	ENSMUST00000225501	processed_transcript		14	-1	60975885	1087
ENSMUSG00000110097	unprocessed_pseudogene	Zscan4a	ENSMUST00000210573	unprocessed_pseudogene		7	-1	10799057	2279
ENSMUSG00000089630	processed_pseudogene	Gm6903	ENSMUST00000160509	processed_pseudogene		16	-1	45534489	1366
ENSMUSG00000076514	IG_V_gene	Igkv17-121	ENSMUST00000197515	IG_V_gene	principal5	6	1	68036812	359
ENSMUSG00000060548	protein_coding	Tnfrsf19	ENSMUST00000224371	protein_coding	alternative2	14	-1	61046490	1239
ENSMUSG00000047669	protein_coding	Msl3l2	ENSMUST00000217668	processed_transcript		10	1	56114915	538
ENSMUSG00000073639	protein_coding	Rab18	ENSMUST00000234356	processed_transcript		18	1	6733905	535
ENSMUSG00000109924	processed_pseudogene	Gm18781	ENSMUST00000211252	processed_pseudogene		7	1	10805245	924
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000115600	nonsense_mediated_decay		16	1	18498902	1519
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000235644	nonsense_mediated_decay		17	1	31386257	1695
ENSMUSG00000076514	IG_V_gene	Igkv17-121	ENSMUST00000103315	IG_V_gene	alternative2	6	1	68036818	350
ENSMUSG00000112528	processed_pseudogene	Gm29794	ENSMUST00000218919	processed_pseudogene		10	-1	56102003	1247
ENSMUSG00000060548	protein_coding	Tnfrsf19	ENSMUST00000225730	protein_coding	alternative2	14	-1	61037891	744
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000232235	processed_transcript		16	1	18498940	455
ENSMUSG00000029723	protein_coding	Tsc22d4	ENSMUST00000129349	retained_intron		5	1	137745959	2989
ENSMUSG00000118594	unprocessed_pseudogene	AC163680.1	ENSMUST00000239372	unprocessed_pseudogene		8	-1	38738552	160
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000137927	nonsense_mediated_decay		17	1	31386262	1737
ENSMUSG00000028521	protein_coding	Slc35d1	ENSMUST00000150285	protein_coding	principal1	4	-1	103215164	4242
ENSMUSG00000000884	protein_coding	Gnb1l	ENSMUST00000151253	retained_intron		16	1	18548743	535
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000235719	protein_coding		17	1	31386264	1787
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000124902	nonsense_mediated_decay		17	1	31386274	1904
ENSMUSG00000031799	protein_coding	Tpm4	ENSMUST00000003575	protein_coding	principal1	8	1	72135229	2158
ENSMUSG00000058022	protein_coding	Adtrp	ENSMUST00000121404	protein_coding	alternative2	13	-1	41847684	1602
ENSMUSG00000038552	protein_coding	Fndc4	ENSMUST00000172435	protein_coding	principal1	5	-1	31295936	2333
ENSMUSG00000106499	processed_pseudogene	Gm9403	ENSMUST00000196299	processed_pseudogene		3	1	132842396	2181
ENSMUSG00000094872	IG_V_gene	Igkv9-120	ENSMUST00000103316	IG_V_gene	principal1	6	1	68049983	353
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000122363	protein_coding	principal3	8	-1	123254348	2952
ENSMUSG00000086965	protein_coding	Rtl10	ENSMUST00000146673	protein_coding	principal1	16	1	18498901	865
ENSMUSG00000028521	protein_coding	Slc35d1	ENSMUST00000036195	protein_coding		4	-1	103214803	4021
ENSMUSG00000031799	protein_coding	Tpm4	ENSMUST00000238752	retained_intron		8	1	72135258	2063
ENSMUSG00000058022	protein_coding	Adtrp	ENSMUST00000220680	nonsense_mediated_decay		13	-1	41828359	1052
ENSMUSG00000020142	protein_coding	Slc1a4	ENSMUST00000004634	protein_coding	alternative2	11	-1	20332684	3872
ENSMUSG00000031799	protein_coding	Tpm4	ENSMUST00000238492	protein_coding		8	1	72135808	2044
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000236507	protein_coding		18	1	35562211	1846
ENSMUSG00000028521	protein_coding	Slc35d1	ENSMUST00000183432	nonsense_mediated_decay		4	-1	103214803	4414
ENSMUSG00000058022	protein_coding	Adtrp	ENSMUST00000220949	processed_transcript		13	-1	41800566	546
ENSMUSG00000038552	protein_coding	Fndc4	ENSMUST00000202158	nonsense_mediated_decay		5	-1	31293713	399
ENSMUSG00000104575	IG_V_pseudogene	Igkv9-119	ENSMUST00000200307	IG_V_pseudogene		6	1	68056345	353
ENSMUSG00000106230	lincRNA	Gm29811	ENSMUST00000197386	lincRNA		3	-1	132878596	1671
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000235960	protein_coding		18	1	35562211	2638
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000236327	retained_intron		18	1	35562217	625
ENSMUSG00000058022	protein_coding	Adtrp	ENSMUST00000223337	protein_coding		13	-1	41828390	515
ENSMUSG00000080923	processed_pseudogene	Gm5400	ENSMUST00000118494	processed_pseudogene		X	1	94311894	943
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000155869	nonsense_mediated_decay		8	-1	123254109	2728
ENSMUSG00000087502	processed_transcript	Gm16091	ENSMUST00000156664	processed_transcript		8	-1	72160855	963
ENSMUSG00000038552	protein_coding	Fndc4	ENSMUST00000041266	protein_coding	principal1	5	-1	31295871	1375
ENSMUSG00000082759	processed_pseudogene	Gm14826	ENSMUST00000121284	processed_pseudogene		X	-1	94318460	901
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000065509	protein_coding	principal1	6	-1	71632905	4816
ENSMUSG00000029723	protein_coding	Tsc22d4	ENSMUST00000100539	protein_coding	principal2	5	1	137745996	3983
ENSMUSG00000097472	antisense	Gm26586	ENSMUST00000181918	antisense		8	-1	72140820	1745
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000154567	retained_intron		17	1	31386276	1629
ENSMUSG00000028521	protein_coding	Slc35d1	ENSMUST00000094947	retained_intron		4	-1	103214799	663
ENSMUSG00000020142	protein_coding	Slc1a4	ENSMUST00000109594	protein_coding	principal2	11	-1	20332713	3926
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000237406	nonsense_mediated_decay		17	1	31386287	1585
ENSMUSG00000028521	protein_coding	Slc35d1	ENSMUST00000154845	retained_intron		4	-1	103214672	416
ENSMUSG00000058022	protein_coding	Adtrp	ENSMUST00000137905	protein_coding		13	-1	41828453	659
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000207023	protein_coding	principal1	6	-1	71632990	4753
ENSMUSG00000038552	protein_coding	Fndc4	ENSMUST00000200845	retained_intron		5	-1	31293966	496
ENSMUSG00000084214	processed_pseudogene	Gm14825	ENSMUST00000113538	processed_pseudogene		X	1	94330971	701
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000141314	nonsense_mediated_decay		17	1	31386294	571
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000146136	retained_intron		8	-1	123254163	3078
ENSMUSG00000029723	protein_coding	Tsc22d4	ENSMUST00000129399	retained_intron		5	1	137751182	402
ENSMUSG00000058022	protein_coding	Adtrp	ENSMUST00000221691	protein_coding		13	-1	41828405	352
ENSMUSG00000113274	antisense	Gm41002	ENSMUST00000222479	antisense		13	-1	73963733	312
ENSMUSG00000038552	protein_coding	Fndc4	ENSMUST00000202615	protein_coding		5	-1	31295433	760
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000235639	protein_coding		17	1	31414156	1913
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000117643	nonsense_mediated_decay		8	-1	123254176	2806
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000206582	retained_intron		6	-1	71591932	785
ENSMUSG00000118613	unitary_pseudogene	AC093451.1	ENSMUST00000214924	unitary_pseudogene		8	-1	111064408	336
ENSMUSG00000029723	protein_coding	Tsc22d4	ENSMUST00000141733	protein_coding		5	1	137758145	563
ENSMUSG00000001864	protein_coding	Aif1l	ENSMUST00000001920	protein_coding	principal1	2	1	31950139	3117
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000237018	nonsense_mediated_decay		18	1	35562217	1888
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000206357	retained_intron		6	-1	71592571	917
ENSMUSG00000038552	protein_coding	Fndc4	ENSMUST00000201906	retained_intron		5	-1	31295259	912
ENSMUSG00000058022	protein_coding	Adtrp	ENSMUST00000179758	protein_coding	alternative2	13	-1	41847616	1046
ENSMUSG00000001864	protein_coding	Aif1l	ENSMUST00000151276	protein_coding		2	1	31950274	288
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000118279	protein_coding	alternative2	8	-1	123254092	2696
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000237061	protein_coding		18	1	35562219	1854
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000136384	protein_coding		17	1	31433071	1887
ENSMUSG00000001864	protein_coding	Aif1l	ENSMUST00000148056	protein_coding		2	1	31950334	670
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000237363	protein_coding		17	1	31433135	1660
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000206339	retained_intron		6	-1	71597162	815
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000130275	retained_intron		8	-1	123254105	1937
ENSMUSG00000038552	protein_coding	Fndc4	ENSMUST00000201417	protein_coding		5	-1	31296080	534
ENSMUSG00000085601	protein_coding	Gm4969	ENSMUST00000141380	protein_coding	principal1	7	-1	19118368	1892
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000155853	processed_transcript		8	-1	123246930	404
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000130547	retained_intron		17	1	31442932	809
ENSMUSG00000029723	protein_coding	Tsc22d4	ENSMUST00000110985	protein_coding	alternative2	5	1	137758185	790
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000237365	protein_coding		18	1	35562299	1951
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000237698	nonsense_mediated_decay		17	1	31448367	517
ENSMUSG00000112211	lincRNA	Gm47682	ENSMUST00000218634	lincRNA		12	-1	56254398	353
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000127978	processed_transcript		8	-1	123247996	705
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000155395	retained_intron		17	1	31453332	638
ENSMUSG00000008193	protein_coding	Spib	ENSMUST00000035323	protein_coding	principal1	7	-1	44532071	2788
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000235199	protein_coding	principal1	18	1	35562445	3107
ENSMUSG00000085601	protein_coding	Gm4969	ENSMUST00000127433	nonsense_mediated_decay		7	-1	19118341	3902
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000236675	processed_transcript		17	1	31460894	1042
ENSMUSG00000079528	antisense	Clnkos	ENSMUST00000177682	antisense		5	1	38735984	437
ENSMUSG00000029723	protein_coding	Tsc22d4	ENSMUST00000110983	protein_coding		5	1	137761699	1043
ENSMUSG00000109067	lincRNA	Gm44784	ENSMUST00000207396	lincRNA		8	1	10723486	460
ENSMUSG00000048249	protein_coding	Crebrf	ENSMUST00000062519	protein_coding	principal1	17	1	26715650	7462
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000154392	protein_coding		17	1	31461628	778
ENSMUSG00000079528	antisense	Clnkos	ENSMUST00000114080	antisense		5	1	38735983	439
ENSMUSG00000029706	protein_coding	Pax4	ENSMUST00000164519	protein_coding	alternative2	6	-1	28449251	1229
ENSMUSG00000112164	lincRNA	Gm19990	ENSMUST00000219468	lincRNA		12	1	56253243	1224
ENSMUSG00000103699	unprocessed_pseudogene	Gm38018	ENSMUST00000195651	unprocessed_pseudogene		6	1	41504124	540
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000238006	protein_coding		17	1	31469880	591
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000237744	protein_coding	principal1	18	1	35562453	2845
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000124508	retained_intron		8	-1	123248013	565
ENSMUSG00000008193	protein_coding	Spib	ENSMUST00000205506	protein_coding		7	-1	44531276	802
ENSMUSG00000029723	protein_coding	Tsc22d4	ENSMUST00000031738	protein_coding		5	1	137761710	1043
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000155113	processed_transcript		17	1	31471041	607
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000205470	processed_transcript		6	-1	71609139	1718
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000236276	protein_coding		18	1	35562487	412
ENSMUSG00000041119	protein_coding	Pde9a	ENSMUST00000236367	retained_intron		17	1	31471052	1290
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000130965	retained_intron		8	-1	123248983	346
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000205505	retained_intron		6	-1	71599419	541
ENSMUSG00000029723	protein_coding	Tsc22d4	ENSMUST00000138698	processed_transcript		5	1	137767690	511
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000235851	protein_coding		18	1	35562683	779
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000137569	retained_intron		8	-1	123251071	354
ENSMUSG00000008193	protein_coding	Spib	ENSMUST00000098483	protein_coding		7	-1	44532053	853
ENSMUSG00000017000	protein_coding	Svs6	ENSMUST00000017144	protein_coding	principal1	2	1	164316751	535
ENSMUSG00000118157	antisense	Gm9902	ENSMUST00000236083	antisense		17	-1	31435018	2027
ENSMUSG00000048249	protein_coding	Crebrf	ENSMUST00000144221	protein_coding		17	1	26715655	1332
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000235581	protein_coding		18	1	35562689	1504
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000205289	protein_coding		6	-1	71632686	2723
ENSMUSG00000020474	protein_coding	Polm	ENSMUST00000109837	protein_coding		11	-1	5837789	2697
ENSMUSG00000082211	protein_coding	Defa27	ENSMUST00000168340	protein_coding		8	1	21315546	371
ENSMUSG00000001062	protein_coding	Vps9d1	ENSMUST00000129591	retained_intron		8	-1	123254050	1361
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000237002	retained_intron		18	1	35571927	1781
ENSMUSG00000001864	protein_coding	Aif1l	ENSMUST00000140649	retained_intron		2	1	31950463	291
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000206798	retained_intron		6	-1	71601155	743
ENSMUSG00000020474	protein_coding	Polm	ENSMUST00000143478	processed_transcript		11	-1	5830200	847
ENSMUSG00000048249	protein_coding	Crebrf	ENSMUST00000142539	protein_coding		17	1	26715710	2674
ENSMUSG00000082211	protein_coding	Defa27	ENSMUST00000167683	protein_coding	principal1	8	1	21315546	282
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000206916	nonsense_mediated_decay		6	-1	71612004	679
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000237622	retained_intron		18	1	35577901	681
ENSMUSG00000020474	protein_coding	Polm	ENSMUST00000156913	processed_transcript		11	-1	5836485	577
ENSMUSG00000037236	protein_coding	Matr3	ENSMUST00000235551	retained_intron		18	1	35579027	1700
ENSMUSG00000020474	protein_coding	Polm	ENSMUST00000124564	processed_transcript		11	-1	5837752	479
ENSMUSG00000048249	protein_coding	Crebrf	ENSMUST00000151681	protein_coding		17	1	26715724	497
ENSMUSG00000020474	protein_coding	Polm	ENSMUST00000153987	processed_transcript		11	-1	5837793	579
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000111246	protein_coding	principal1	2	-1	93849941	3950
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000224973	protein_coding		13	1	55209782	9905
ENSMUSG00000048249	protein_coding	Crebrf	ENSMUST00000132972	retained_intron		17	1	26742984	531
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000062904	protein_coding	principal1	4	1	151933691	3151
ENSMUSG00000048249	protein_coding	Crebrf	ENSMUST00000176845	retained_intron		17	1	26757702	458
ENSMUSG00000096553	antisense	Gm10097	ENSMUST00000238588	antisense		10	1	5069195	2781
ENSMUSG00000096553	antisense	Gm10097	ENSMUST00000180100	antisense		10	1	5069192	2784
ENSMUSG00000020474	protein_coding	Polm	ENSMUST00000020767	protein_coding	principal1	11	-1	5838016	2924
ENSMUSG00000001864	protein_coding	Aif1l	ENSMUST00000138833	retained_intron		2	1	31950517	782
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000206704	retained_intron		6	-1	71621674	3137
ENSMUSG00000111890	processed_pseudogene	Gm48836	ENSMUST00000220298	processed_pseudogene		10	-1	5091286	281
ENSMUSG00000001864	protein_coding	Aif1l	ENSMUST00000128271	processed_transcript		2	1	31960348	519
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000206050	processed_transcript		6	-1	71603980	341
ENSMUSG00000072592	lincRNA	Gm10373	ENSMUST00000100683	lincRNA		15	-1	43477036	668
ENSMUSG00000074500	protein_coding	Zfp558	ENSMUST00000159596	nonsense_mediated_decay		9	-1	18478263	2918
ENSMUSG00000001864	protein_coding	Aif1l	ENSMUST00000125457	processed_transcript		2	1	31961329	260
ENSMUSG00000073639	protein_coding	Rab18	ENSMUST00000234810	protein_coding	principal1	18	1	6765145	6515
ENSMUSG00000029706	protein_coding	Pax4	ENSMUST00000031718	protein_coding	principal3	6	-1	28449353	1370
ENSMUSG00000112305	processed_pseudogene	Gm48875	ENSMUST00000220445	processed_pseudogene		10	1	122199150	349
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000068513	protein_coding		2	-1	93849679	1872
ENSMUSG00000001864	protein_coding	Aif1l	ENSMUST00000156743	retained_intron		2	1	31961919	614
ENSMUSG00000110402	unprocessed_pseudogene	Gm7203	ENSMUST00000210880	unprocessed_pseudogene		7	1	10810780	1404
ENSMUSG00000001864	protein_coding	Aif1l	ENSMUST00000156564	processed_transcript		2	1	31963269	382
ENSMUSG00000073639	protein_coding	Rab18	ENSMUST00000234720	nonsense_mediated_decay		18	1	6765203	354
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000206597	processed_transcript		6	-1	71621397	828
ENSMUSG00000053470	protein_coding	Kdm3a	ENSMUST00000167220	protein_coding	principal1	6	-1	71632686	4853
ENSMUSG00000001864	protein_coding	Aif1l	ENSMUST00000145137	retained_intron		2	1	31969320	726
ENSMUSG00000033633	protein_coding	Clec18a	ENSMUST00000190778	nonsense_mediated_decay		8	-1	111082088	2438
ENSMUSG00000073639	protein_coding	Rab18	ENSMUST00000234626	protein_coding		18	1	6765213	729
ENSMUSG00000043549	protein_coding	Fam90a1b	ENSMUST00000044989	protein_coding	principal1	X	-1	94366777	2939
ENSMUSG00000112873	antisense	Gm48877	ENSMUST00000218285	antisense		10	-1	122546498	548
ENSMUSG00000085737	antisense	Gm13442	ENSMUST00000135749	antisense		2	-1	31962547	663
ENSMUSG00000112794	TEC	Gm48878	ENSMUST00000219628	TEC		10	1	122454132	2678
ENSMUSG00000112774	lincRNA	Gm36041	ENSMUST00000218971	lincRNA		10	1	122386892	2245
ENSMUSG00000073639	protein_coding	Rab18	ENSMUST00000097680	protein_coding		18	1	6765220	1184
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000041593	protein_coding		2	-1	93849799	2036
ENSMUSG00000043549	protein_coding	Fam90a1b	ENSMUST00000113903	protein_coding	principal1	X	-1	94365733	1760
ENSMUSG00000117359	processed_pseudogene	Gm7466	ENSMUST00000234092	processed_pseudogene		18	-1	6760959	444
ENSMUSG00000074500	protein_coding	Zfp558	ENSMUST00000034647	protein_coding	principal1	9	-1	18473559	1701
ENSMUSG00000004328	protein_coding	Hif3a	ENSMUST00000108492	protein_coding	alternative2	7	-1	17062427	6402
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000032936	protein_coding	principal1	7	-1	126792496	1359
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000168431	protein_coding	alternative2	1	1	39900913	5632
ENSMUSG00000029706	protein_coding	Pax4	ENSMUST00000171089	protein_coding	alternative2	6	-1	28449251	1221
ENSMUSG00000113543	lincRNA	Gm36264	ENSMUST00000221672	lincRNA		13	-1	9076451	1073
ENSMUSG00000113543	lincRNA	Gm36264	ENSMUST00000221989	lincRNA		13	-1	9076451	1142
ENSMUSG00000043549	protein_coding	Fam90a1b	ENSMUST00000113902	protein_coding		X	-1	94366028	559
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000193661	retained_intron		1	1	39901170	1065
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000206570	protein_coding	principal1	7	-1	126792340	1400
ENSMUSG00000074500	protein_coding	Zfp558	ENSMUST00000162441	processed_transcript		9	-1	18478268	738
ENSMUSG00000118554	protein_coding	AL646049.1	ENSMUST00000239046	protein_coding	principal1	X	-1	94364570	1107
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000043045	protein_coding	principal2	X	1	7722217	1609
ENSMUSG00000029706	protein_coding	Pax4	ENSMUST00000174194	protein_coding	alternative2	6	-1	28447180	974
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000205786	protein_coding		7	-1	126788410	477
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000191761	protein_coding		1	1	39901170	1272
ENSMUSG00000020123	protein_coding	Avpr1a	ENSMUST00000020323	protein_coding	principal1	10	1	122448499	2670
ENSMUSG00000074500	protein_coding	Zfp558	ENSMUST00000034646	processed_transcript		9	-1	18473422	378
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000207386	protein_coding		X	1	7722222	742
ENSMUSG00000100957	lincRNA	Gm28762	ENSMUST00000191259	lincRNA		Y	-1	32526576	1493
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000206477	protein_coding		7	-1	126787339	453
ENSMUSG00000004328	protein_coding	Hif3a	ENSMUST00000037762	protein_coding	principal3	7	-1	17056679	2206
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000146045	retained_intron		2	-1	93839359	639
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000116634	protein_coding	alternative2	X	1	7722227	1250
ENSMUSG00000102619	TEC	Gm37849	ENSMUST00000194722	TEC		1	-1	186713098	1881
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000208072	protein_coding		X	1	7722229	579
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000099490	protein_coding	principal1	13	1	55209782	12784
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000205935	nonsense_mediated_decay		7	-1	126792493	881
ENSMUSG00000044025	protein_coding	Olfr790	ENSMUST00000203966	protein_coding	principal1	10	1	129498492	2602
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000207589	protein_coding		X	1	7722229	1007
ENSMUSG00000004328	protein_coding	Hif3a	ENSMUST00000139224	protein_coding		7	-1	17050663	371
ENSMUSG00000100957	lincRNA	Gm28762	ENSMUST00000185669	lincRNA		Y	-1	32526123	431
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000206353	protein_coding		7	-1	126789044	301
ENSMUSG00000100957	lincRNA	Gm28762	ENSMUST00000188315	lincRNA		Y	-1	32526123	612
ENSMUSG00000044025	protein_coding	Olfr790	ENSMUST00000215067	protein_coding	principal1	10	1	129498650	2659
ENSMUSG00000029706	protein_coding	Pax4	ENSMUST00000174423	retained_intron		6	-1	28446375	673
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000172621	protein_coding	principal1	3	-1	87768943	4490
ENSMUSG00000044025	protein_coding	Olfr790	ENSMUST00000056002	protein_coding	principal1	10	1	129500813	1070
ENSMUSG00000044025	protein_coding	Olfr790	ENSMUST00000218901	protein_coding		10	1	129500813	1070
ENSMUSG00000018217	protein_coding	Pmp22	ENSMUST00000018361	protein_coding	principal1	11	1	63131512	1800
ENSMUSG00000004328	protein_coding	Hif3a	ENSMUST00000153833	protein_coding		7	-1	17062384	461
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000206334	nonsense_mediated_decay		7	-1	126792147	494
ENSMUSG00000029706	protein_coding	Pax4	ENSMUST00000174036	retained_intron		6	-1	28447180	595
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000208524	nonsense_mediated_decay		X	1	7722230	485
ENSMUSG00000024360	protein_coding	Etf1	ENSMUST00000025218	protein_coding	principal1	18	-1	34932007	3709
ENSMUSG00000108807	TEC	4833404L02Rik	ENSMUST00000206290	TEC		7	1	17058534	908
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000206261	retained_intron		7	-1	126789017	776
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000224156	protein_coding		13	1	55210735	1149
ENSMUSG00000037868	protein_coding	Egr2	ENSMUST00000048289	protein_coding	principal3	10	1	67537869	2965
ENSMUSG00000018217	protein_coding	Pmp22	ENSMUST00000108702	protein_coding	principal1	11	1	63128982	1822
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000208618	protein_coding		X	1	7722230	1122
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000224338	retained_intron		13	1	55211541	2013
ENSMUSG00000108997	lincRNA	Gm45045	ENSMUST00000207368	lincRNA		8	1	10732676	218
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000205950	retained_intron		7	-1	126792466	865
ENSMUSG00000109271	lincRNA	Gm39129	ENSMUST00000207553	lincRNA		8	1	10738890	806
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000205862	retained_intron		7	-1	126792496	1984
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000174713	nonsense_mediated_decay		3	-1	87768949	4505
ENSMUSG00000081497	processed_pseudogene	Gm15560	ENSMUST00000117107	processed_pseudogene		10	-1	7808758	643
ENSMUSG00000018217	protein_coding	Pmp22	ENSMUST00000108701	protein_coding	principal1	11	1	63132569	723
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000224918	protein_coding		13	1	55211819	1001
ENSMUSG00000030697	protein_coding	Ppp4c	ENSMUST00000205879	retained_intron		7	-1	126792482	1747
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000173490	retained_intron		3	-1	87754205	2575
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000139555	retained_intron		4	1	151933731	3841
ENSMUSG00000017004	protein_coding	Svs5	ENSMUST00000017148	protein_coding	principal1	2	1	164332740	628
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000207183	processed_transcript		X	1	7722231	487
ENSMUSG00000046016	protein_coding	Olfr1364	ENSMUST00000206526	protein_coding	principal1	13	-1	21581652	2938
ENSMUSG00000096258	processed_pseudogene	Rps16-ps3	ENSMUST00000179126	processed_pseudogene		8	-1	10809128	441
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000208443	protein_coding		X	1	7722240	1172
ENSMUSG00000018217	protein_coding	Pmp22	ENSMUST00000140648	processed_transcript		11	1	63132803	388
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000133959	retained_intron		4	1	151933734	688
ENSMUSG00000046016	protein_coding	Olfr1364	ENSMUST00000216898	processed_transcript		13	-1	21581759	2908
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000225194	retained_intron		13	1	55212070	1770
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000146436	retained_intron		2	-1	93849943	4170
ENSMUSG00000046016	protein_coding	Olfr1364	ENSMUST00000213912	protein_coding	principal1	13	-1	21581759	3119
ENSMUSG00000037868	protein_coding	Egr2	ENSMUST00000105438	protein_coding	alternative2	10	1	67537870	2864
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000237181	retained_intron		19	1	5460615	1569
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000225982	retained_intron		13	1	55212070	1822
ENSMUSG00000018217	protein_coding	Pmp22	ENSMUST00000108700	protein_coding	principal1	11	1	63133068	733
ENSMUSG00000029027	protein_coding	Dffb	ENSMUST00000030893	protein_coding	principal1	4	-1	153975126	2093
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000224693	protein_coding		13	1	55212075	852
ENSMUSG00000017004	protein_coding	Svs5	ENSMUST00000149370	protein_coding		2	1	164333450	380
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000207541	protein_coding		X	1	7722243	523
ENSMUSG00000037868	protein_coding	Egr2	ENSMUST00000127820	protein_coding	alternative2	10	1	67538683	2665
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000174759	protein_coding	principal1	3	-1	87768943	3554
ENSMUSG00000046016	protein_coding	Olfr1364	ENSMUST00000057453	protein_coding	principal1	13	-1	21574454	945
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000208528	protein_coding		X	1	7722243	506
ENSMUSG00000078965	processed_pseudogene	Gm12033	ENSMUST00000180654	processed_pseudogene		11	-1	20336013	1002
ENSMUSG00000037868	protein_coding	Egr2	ENSMUST00000130933	protein_coding		10	1	67537870	427
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000225169	protein_coding		13	1	55212386	339
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000150666	nonsense_mediated_decay		2	-1	93847929	769
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000225796	retained_intron		19	1	5460616	2277
ENSMUSG00000107726	lincRNA	Gm44037	ENSMUST00000204816	lincRNA		4	1	103217702	1891
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000128719	retained_intron		2	-1	93842268	628
ENSMUSG00000031819	protein_coding	Emc8	ENSMUST00000034277	protein_coding	principal1	8	-1	120668121	4942
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000225917	retained_intron		19	1	5460616	1923
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000172669	nonsense_mediated_decay		3	-1	87753834	759
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000140018	retained_intron		2	-1	93842381	624
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000223894	processed_transcript		13	1	55263425	426
ENSMUSG00000029027	protein_coding	Dffb	ENSMUST00000133607	nonsense_mediated_decay		4	-1	153975051	1634
ENSMUSG00000021488	protein_coding	Nsd1	ENSMUST00000225405	retained_intron		13	1	55290968	772
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000174219	nonsense_mediated_decay		3	-1	87756853	632
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000130077	protein_coding		2	-1	93849816	573
ENSMUSG00000029027	protein_coding	Dffb	ENSMUST00000219093	processed_transcript		4	-1	153972409	704
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000128582	retained_intron		4	1	151933739	5607
ENSMUSG00000031819	protein_coding	Emc8	ENSMUST00000181402	retained_intron		8	-1	120668012	3380
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000149073	retained_intron		2	-1	93849939	770
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000173468	nonsense_mediated_decay		3	-1	87768943	1637
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000141413	retained_intron		2	-1	93849939	756
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000139069	nonsense_mediated_decay		4	1	151933744	2300
ENSMUSG00000037868	protein_coding	Egr2	ENSMUST00000145754	protein_coding		10	1	67535475	773
ENSMUSG00000105912	lincRNA	Gm10440	ENSMUST00000197424	lincRNA		5	1	54349991	2753
ENSMUSG00000029027	protein_coding	Dffb	ENSMUST00000142671	retained_intron		4	-1	153975057	699
ENSMUSG00000031819	protein_coding	Emc8	ENSMUST00000181950	protein_coding		8	-1	120668087	747
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000209144	nonsense_mediated_decay		X	1	7722248	758
ENSMUSG00000037868	protein_coding	Egr2	ENSMUST00000145936	protein_coding		10	1	67535583	902
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000147625	protein_coding		4	1	151946332	595
ENSMUSG00000029027	protein_coding	Dffb	ENSMUST00000154458	retained_intron		4	-1	153975081	408
ENSMUSG00000040272	protein_coding	Accs	ENSMUST00000148268	processed_transcript		2	-1	93845784	728
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000123551	processed_transcript		4	1	151957143	710
ENSMUSG00000106529	processed_pseudogene	Gm18451	ENSMUST00000196759	processed_pseudogene		5	1	54569905	1719
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000173747	retained_intron		3	-1	87768955	819
ENSMUSG00000037868	protein_coding	Egr2	ENSMUST00000146986	protein_coding		10	1	67537930	356
ENSMUSG00000099550	protein_coding	Gm28079	ENSMUST00000185688	processed_transcript		Y	-1	70014843	1600
ENSMUSG00000084391	processed_pseudogene	Gm13967	ENSMUST00000120404	processed_pseudogene		2	1	113384681	380
ENSMUSG00000105143	processed_pseudogene	Gm8069	ENSMUST00000197887	processed_pseudogene		5	-1	54652121	154
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000115689	protein_coding	principal2	X	1	7722249	1568
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000172590	protein_coding		3	-1	87768943	429
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000142198	processed_transcript		4	1	151967838	823
ENSMUSG00000031819	protein_coding	Emc8	ENSMUST00000180417	nonsense_mediated_decay		8	-1	120668573	1863
ENSMUSG00000106126	TEC	Gm43781	ENSMUST00000197634	TEC		5	1	54807334	2681
ENSMUSG00000029766	protein_coding	1700012A03Rik	ENSMUST00000201926	processed_transcript		6	1	32050246	963
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000173225	nonsense_mediated_decay		3	-1	87768943	632
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000148048	retained_intron		4	1	151969746	786
ENSMUSG00000099550	protein_coding	Gm28079	ENSMUST00000186763	processed_transcript		Y	-1	70014755	248
ENSMUSG00000031819	protein_coding	Emc8	ENSMUST00000181111	protein_coding		8	-1	120667763	450
ENSMUSG00000099550	protein_coding	Gm28079	ENSMUST00000188634	processed_transcript		Y	-1	70014755	302
ENSMUSG00000086015	processed_transcript	4833417C18Rik	ENSMUST00000146868	processed_transcript		11	1	95858865	1269
ENSMUSG00000106113	processed_pseudogene	Gm43779	ENSMUST00000196691	processed_pseudogene		5	1	54996620	829
ENSMUSG00000029766	protein_coding	1700012A03Rik	ENSMUST00000135066	processed_transcript		6	1	32050268	623
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000138738	retained_intron		4	1	151969815	837
ENSMUSG00000031819	protein_coding	Emc8	ENSMUST00000181836	protein_coding		8	-1	120667836	470
ENSMUSG00000099550	protein_coding	Gm28079	ENSMUST00000189328	processed_transcript		Y	-1	70014761	654
ENSMUSG00000084798	antisense	4930533B01Rik	ENSMUST00000123377	antisense		2	-1	113708550	1029
ENSMUSG00000029766	protein_coding	1700012A03Rik	ENSMUST00000156267	processed_transcript		6	1	32058141	184
ENSMUSG00000086946	processed_transcript	Gm15527	ENSMUST00000146902	retained_intron		6	-1	54254911	3210
ENSMUSG00000105702	TEC	Gm43780	ENSMUST00000196510	TEC		5	1	55503529	3600
ENSMUSG00000085578	lincRNA	Gm11527	ENSMUST00000153795	lincRNA		11	-1	95859174	596
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000149337	retained_intron		4	1	151978984	653
ENSMUSG00000031819	protein_coding	Emc8	ENSMUST00000181334	protein_coding		8	-1	120668003	368
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000131077	protein_coding		X	1	7722250	775
ENSMUSG00000039768	protein_coding	Dnajc11	ENSMUST00000124955	retained_intron		4	1	151979743	830
ENSMUSG00000087106	antisense	Gm13964	ENSMUST00000133815	antisense		2	-1	113504034	734
ENSMUSG00000031819	protein_coding	Emc8	ENSMUST00000180909	retained_intron		8	-1	120668113	571
ENSMUSG00000029766	protein_coding	1700012A03Rik	ENSMUST00000031778	protein_coding	principal1	6	1	32050285	918
ENSMUSG00000086946	processed_transcript	Gm15527	ENSMUST00000138259	antisense		6	-1	54279074	858
ENSMUSG00000087545	antisense	Gm13966	ENSMUST00000148420	antisense		2	-1	113442304	832
ENSMUSG00000099550	protein_coding	Gm28079	ENSMUST00000187271	nonsense_mediated_decay		Y	-1	70012798	324
ENSMUSG00000086946	processed_transcript	Gm15527	ENSMUST00000144094	antisense		6	-1	54279076	770
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000115688	protein_coding		X	1	7722250	1510
ENSMUSG00000099550	protein_coding	Gm28079	ENSMUST00000186184	processed_transcript		Y	-1	70014786	121
ENSMUSG00000108081	antisense	Gm44026	ENSMUST00000203985	antisense		6	-1	54473170	2088
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000207675	protein_coding		X	1	7722266	1335
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000222399	protein_coding	alternative2	13	1	73937811	2430
ENSMUSG00000099550	protein_coding	Gm28079	ENSMUST00000190418	nonsense_mediated_decay		Y	-1	70014787	543
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000116633	protein_coding		X	1	7722268	763
ENSMUSG00000117148	protein_coding	Vmn1r229	ENSMUST00000232810	protein_coding	principal1	17	1	20811555	9467
ENSMUSG00000099550	protein_coding	Gm28079	ENSMUST00000186006	processed_transcript		Y	-1	70014743	397
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000208996	protein_coding		X	1	7722270	650
ENSMUSG00000117148	protein_coding	Vmn1r229	ENSMUST00000233712	protein_coding	principal1	17	1	20811618	9510
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000174776	protein_coding		3	-1	87768966	686
ENSMUSG00000117148	protein_coding	Vmn1r229	ENSMUST00000232852	protein_coding	principal1	17	1	20811618	9451
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000209143	nonsense_mediated_decay		X	1	7722273	723
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000110954	processed_transcript		2	1	113327771	2384
ENSMUSG00000117148	protein_coding	Vmn1r229	ENSMUST00000233490	retained_intron		17	1	20811618	12010
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000173184	protein_coding		3	-1	87768935	509
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000207337	nonsense_mediated_decay		X	1	7722276	542
ENSMUSG00000116121	protein_coding	Gm49486	ENSMUST00000053926	protein_coding	principal1	15	1	79229391	2415
ENSMUSG00000041966	protein_coding	Dcaf17	ENSMUST00000130292	protein_coding		2	1	71055328	1214
ENSMUSG00000117148	protein_coding	Vmn1r229	ENSMUST00000076759	protein_coding	principal1	17	1	20814495	921
ENSMUSG00000099550	protein_coding	Gm28079	ENSMUST00000188554	protein_coding	principal1	Y	-1	70014865	1170
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000128352	protein_coding		15	1	99295087	658
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000144148	protein_coding		X	1	7722335	632
ENSMUSG00000073067	processed_transcript	9130019P16Rik	ENSMUST00000145111	antisense		6	-1	54430221	4486
ENSMUSG00000099550	protein_coding	Gm28079	ENSMUST00000191151	protein_coding		Y	-1	70014899	685
ENSMUSG00000073067	processed_transcript	9130019P16Rik	ENSMUST00000185712	lincRNA		6	-1	54327341	650
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000125991	protein_coding		X	1	7722355	807
ENSMUSG00000087513	lincRNA	Gm13236	ENSMUST00000153010	lincRNA		4	1	145762929	940
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000154253	nonsense_mediated_decay		X	1	7722357	650
ENSMUSG00000073067	processed_transcript	9130019P16Rik	ENSMUST00000135612	lincRNA		6	-1	54429537	1019
ENSMUSG00000050428	protein_coding	Fbxo46	ENSMUST00000053109	protein_coding	principal1	7	1	19119859	4873
ENSMUSG00000026874	protein_coding	Hc	ENSMUST00000028233	protein_coding	principal1	2	-1	35061438	5445
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000148624	protein_coding		X	1	7722362	512
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000079083	protein_coding	principal1	3	-1	87768953	4297
ENSMUSG00000015757	protein_coding	Ppil4	ENSMUST00000015901	protein_coding	principal1	10	1	7792891	3471
ENSMUSG00000039315	protein_coding	Clnk	ENSMUST00000169819	protein_coding	principal2	5	-1	38876812	1700
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000049908	protein_coding	principal1	8	-1	70608314	1475
ENSMUSG00000021913	protein_coding	Ogdhl	ENSMUST00000228529	protein_coding	alternative2	14	1	32322019	3723
ENSMUSG00000081550	processed_pseudogene	Gm15877	ENSMUST00000121897	processed_pseudogene		7	1	12517405	964
ENSMUSG00000026874	protein_coding	Hc	ENSMUST00000156412	protein_coding		2	-1	35019645	579
ENSMUSG00000050428	protein_coding	Fbxo46	ENSMUST00000165913	protein_coding	principal1	7	1	19131693	2498
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000127847	retained_intron		X	1	7722733	367
ENSMUSG00000020541	protein_coding	Tom1l1	ENSMUST00000020849	protein_coding	principal1	11	-1	90687607	4308
ENSMUSG00000089821	antisense	Efhd1os	ENSMUST00000138844	antisense		1	-1	87265174	332
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000138930	processed_transcript		6	1	54039554	672
ENSMUSG00000021913	protein_coding	Ogdhl	ENSMUST00000228286	processed_transcript		14	1	32325392	744
ENSMUSG00000034039	protein_coding	Prss29	ENSMUST00000024993	protein_coding	principal2	17	1	25318654	1181
ENSMUSG00000020541	protein_coding	Tom1l1	ENSMUST00000107867	protein_coding		11	-1	90662999	2439
ENSMUSG00000026874	protein_coding	Hc	ENSMUST00000156049	processed_transcript		2	-1	34993336	659
ENSMUSG00000039315	protein_coding	Clnk	ENSMUST00000171633	protein_coding	alternative2	5	-1	38876812	1700
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000115687	protein_coding	principal2	X	1	7722927	1299
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000193682	protein_coding	alternative2	1	1	39901179	3759
ENSMUSG00000034039	protein_coding	Prss29	ENSMUST00000234609	protein_coding	alternative2	17	1	25318654	1178
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000029714	protein_coding	principal1	3	-1	87824255	4260
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000225141	protein_coding	principal1	19	1	5460616	1209
ENSMUSG00000021913	protein_coding	Ogdhl	ENSMUST00000022480	protein_coding	principal2	14	1	32322019	3449
ENSMUSG00000026874	protein_coding	Hc	ENSMUST00000125549	retained_intron		2	-1	35000851	694
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000155914	processed_transcript		X	1	7723545	598
ENSMUSG00000020541	protein_coding	Tom1l1	ENSMUST00000107869	protein_coding		11	-1	90687579	1826
ENSMUSG00000056367	protein_coding	Actr3b	ENSMUST00000128727	protein_coding		5	1	25759997	2031
ENSMUSG00000015757	protein_coding	Ppil4	ENSMUST00000138151	retained_intron		10	1	7792908	1548
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000207109	protein_coding		X	1	7724188	955
ENSMUSG00000026874	protein_coding	Hc	ENSMUST00000151628	processed_transcript		2	-1	35006327	655
ENSMUSG00000028073	protein_coding	Pear1	ENSMUST00000090981	protein_coding	principal1	3	-1	87824306	4314
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000208517	processed_transcript		X	1	7724353	755
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000208918	processed_transcript		X	1	7725802	583
ENSMUSG00000015757	protein_coding	Ppil4	ENSMUST00000143214	nonsense_mediated_decay		10	1	7792921	2301
ENSMUSG00000085599	antisense	Gm13449	ENSMUST00000153559	antisense		2	1	34993973	1231
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000124707	retained_intron		X	1	7726573	648
ENSMUSG00000015757	protein_coding	Ppil4	ENSMUST00000137346	retained_intron		10	1	7799566	765
ENSMUSG00000020315	protein_coding	Sptbn1	ENSMUST00000006629	protein_coding	alternative1	11	-1	30268169	8461
ENSMUSG00000031974	protein_coding	Abcb10	ENSMUST00000075578	protein_coding	principal1	8	-1	123983122	4306
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000208719	protein_coding		X	1	7726754	756
ENSMUSG00000039382	protein_coding	Wdr45	ENSMUST00000209077	retained_intron		X	1	7727067	340
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000210369	protein_coding		8	-1	70608872	1828
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000025847	protein_coding		19	1	5460629	1215
ENSMUSG00000030385	protein_coding	2900092C05Rik	ENSMUST00000032541	protein_coding	principal1	7	1	12512517	887
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000195860	protein_coding	alternative2	1	1	39901179	3960
ENSMUSG00000099756	lincRNA	Gm28763	ENSMUST00000188870	lincRNA		Y	-1	32558442	166
ENSMUSG00000026941	protein_coding	Mamdc4	ENSMUST00000114223	protein_coding	alternative2	2	-1	25571358	3998
ENSMUSG00000110704	antisense	Gm45732	ENSMUST00000212460	antisense		8	-1	124048412	586
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000195259	protein_coding	alternative2	1	1	39901180	3719
ENSMUSG00000026255	protein_coding	Efhd1	ENSMUST00000118687	nonsense_mediated_decay		1	1	87264363	1726
ENSMUSG00000110022	processed_pseudogene	Gm45475	ENSMUST00000209381	processed_pseudogene		7	1	12559860	309
ENSMUSG00000026941	protein_coding	Mamdc4	ENSMUST00000152237	protein_coding	alternative2	2	-1	25570254	3388
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000195636	protein_coding	alternative2	1	1	39901224	4082
ENSMUSG00000056367	protein_coding	Actr3b	ENSMUST00000088244	protein_coding	principal1	5	1	25760026	1712
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000224944	retained_intron		19	1	5460885	773
ENSMUSG00000117694	protein_coding	Snhg4	ENSMUST00000235176	protein_coding	alternative2	18	1	35553404	653
ENSMUSG00000026941	protein_coding	Mamdc4	ENSMUST00000135288	processed_transcript		2	-1	25569485	652
ENSMUSG00000026255	protein_coding	Efhd1	ENSMUST00000027472	protein_coding	principal1	1	1	87264363	1854
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000238011	retained_intron		19	1	5462390	730
ENSMUSG00000056367	protein_coding	Actr3b	ENSMUST00000198693	processed_transcript		5	1	25760039	428
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000225222	retained_intron		19	1	5462467	1499
ENSMUSG00000051550	protein_coding	Zfp579	ENSMUST00000159754	processed_transcript		7	-1	4996055	1557
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000237258	retained_intron		19	1	5462549	1049
ENSMUSG00000026941	protein_coding	Mamdc4	ENSMUST00000152124	processed_transcript		2	-1	25569115	371
ENSMUSG00000031149	protein_coding	Praf2	ENSMUST00000033489	protein_coding	principal1	X	1	7728439	1339
ENSMUSG00000051550	protein_coding	Zfp579	ENSMUST00000162731	protein_coding	principal1	7	-1	4995340	2489
ENSMUSG00000026255	protein_coding	Efhd1	ENSMUST00000150831	processed_transcript		1	1	87309226	353
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000224422	retained_intron		19	1	5463151	600
ENSMUSG00000096002	protein_coding	Vmn2r53	ENSMUST00000233892	protein_coding	alternative2	7	-1	12608788	21388
ENSMUSG00000096002	protein_coding	Vmn2r53	ENSMUST00000232701	nonsense_mediated_decay		7	-1	12608788	22143
ENSMUSG00000020541	protein_coding	Tom1l1	ENSMUST00000107868	protein_coding		11	-1	90687601	2093
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000224005	retained_intron		19	1	5463205	410
ENSMUSG00000094417	processed_pseudogene	Gm13243	ENSMUST00000117481	processed_pseudogene		4	1	145774719	565
ENSMUSG00000020315	protein_coding	Sptbn1	ENSMUST00000102838	protein_coding	principal3	11	-1	30198257	9107
ENSMUSG00000051258	protein_coding	Olfr1362	ENSMUST00000051874	protein_coding	principal1	13	-1	21614022	3045
ENSMUSG00000041977	protein_coding	Arhgef11	ENSMUST00000136072	retained_intron		3	1	87617559	2408
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000226017	retained_intron		19	1	5463644	721
ENSMUSG00000026941	protein_coding	Mamdc4	ENSMUST00000142811	processed_transcript		2	-1	25574845	746
ENSMUSG00000094177	unprocessed_pseudogene	Vmn2r-ps15	ENSMUST00000180112	unprocessed_pseudogene		4	1	145775612	377
ENSMUSG00000024911	protein_coding	Fibp	ENSMUST00000235533	retained_intron		19	1	5464280	278
ENSMUSG00000096002	protein_coding	Vmn2r53	ENSMUST00000170412	protein_coding	principal2	7	-1	12606544	2421
ENSMUSG00000020315	protein_coding	Sptbn1	ENSMUST00000133466	retained_intron		11	-1	30105610	3084
ENSMUSG00000051550	protein_coding	Zfp579	ENSMUST00000160225	processed_transcript		7	-1	4996158	856
ENSMUSG00000020541	protein_coding	Tom1l1	ENSMUST00000127034	retained_intron		11	-1	90649929	728
ENSMUSG00000020315	protein_coding	Sptbn1	ENSMUST00000127209	retained_intron		11	-1	30111359	744
ENSMUSG00000082872	processed_pseudogene	Gm15773	ENSMUST00000118665	processed_pseudogene		7	1	12603196	1448
ENSMUSG00000026941	protein_coding	Mamdc4	ENSMUST00000095117	protein_coding	principal2	2	-1	25571316	3990
ENSMUSG00000045417	protein_coding	Vmn1r230	ENSMUST00000232909	protein_coding	principal1	17	1	20840444	8172
ENSMUSG00000020315	protein_coding	Sptbn1	ENSMUST00000145315	retained_intron		11	-1	30103249	2956
ENSMUSG00000020541	protein_coding	Tom1l1	ENSMUST00000147329	retained_intron		11	-1	90663312	2694
ENSMUSG00000051550	protein_coding	Zfp579	ENSMUST00000162502	protein_coding		7	-1	4996085	794
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000211134	retained_intron		8	-1	70608302	1549
ENSMUSG00000045417	protein_coding	Vmn1r230	ENSMUST00000233670	protein_coding	principal1	17	1	20840444	7934
ENSMUSG00000033633	protein_coding	Clec18a	ENSMUST00000191469	nonsense_mediated_decay		8	-1	111082088	2409
ENSMUSG00000020541	protein_coding	Tom1l1	ENSMUST00000154599	protein_coding		11	-1	90687588	592
ENSMUSG00000030407	protein_coding	Qpctl	ENSMUST00000032566	protein_coding	principal1	7	-1	19149291	2710
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000210305	processed_transcript		8	-1	70597938	299
ENSMUSG00000051550	protein_coding	Zfp579	ENSMUST00000160808	processed_transcript		7	-1	4996029	366
ENSMUSG00000045417	protein_coding	Vmn1r230	ENSMUST00000233939	protein_coding	principal1	17	1	20840450	8003
ENSMUSG00000020541	protein_coding	Tom1l1	ENSMUST00000131055	processed_transcript		11	-1	90688366	749
ENSMUSG00000020315	protein_coding	Sptbn1	ENSMUST00000149117	retained_intron		11	-1	30268175	3342
ENSMUSG00000045417	protein_coding	Vmn1r230	ENSMUST00000053974	protein_coding	principal1	17	1	20846551	951
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000222191	retained_intron		13	1	73937821	4569
ENSMUSG00000020315	protein_coding	Sptbn1	ENSMUST00000124231	protein_coding		11	-1	30267214	6524
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000209430	retained_intron		8	-1	70598478	416
ENSMUSG00000030407	protein_coding	Qpctl	ENSMUST00000205979	retained_intron		7	-1	19147528	2135
ENSMUSG00000051550	protein_coding	Zfp579	ENSMUST00000108572	protein_coding	principal1	7	-1	4996101	2157
ENSMUSG00000108961	lincRNA	Gm32540	ENSMUST00000207174	lincRNA		8	-1	10866186	1872
ENSMUSG00000033633	protein_coding	Clec18a	ENSMUST00000191030	nonsense_mediated_decay		8	-1	111082088	2319
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000137064	nonsense_mediated_decay		13	-1	52919232	1258
ENSMUSG00000020315	protein_coding	Sptbn1	ENSMUST00000011877	protein_coding	alternative1	11	-1	30219772	8238
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000211488	retained_intron		8	-1	70599438	637
ENSMUSG00000073073	processed_transcript	Gm8098	ENSMUST00000146985	processed_transcript		11	1	30267464	1499
ENSMUSG00000041966	protein_coding	Dcaf17	ENSMUST00000154704	protein_coding	principal1	2	1	71055744	7739
ENSMUSG00000117694	protein_coding	Snhg4	ENSMUST00000235801	protein_coding	alternative2	18	1	35553408	367
ENSMUSG00000024910	protein_coding	Ctsw	ENSMUST00000235502	retained_intron		19	-1	5468488	1496
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000099384	protein_coding	principal2	13	1	73937838	2407
ENSMUSG00000033633	protein_coding	Clec18a	ENSMUST00000188466	protein_coding	alternative2	8	-1	111081862	1973
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000210382	retained_intron		8	-1	70599697	502
ENSMUSG00000033633	protein_coding	Clec18a	ENSMUST00000039597	protein_coding	principal5	8	-1	111082088	1998
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000210699	retained_intron		8	-1	70599909	505
ENSMUSG00000024910	protein_coding	Ctsw	ENSMUST00000235786	retained_intron		19	-1	5468501	1564
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000210006	retained_intron		8	-1	70599610	272
ENSMUSG00000067949	transcribed_unprocessed_pseudogene	Vmn1r-ps144	ENSMUST00000237719	processed_transcript		17	1	20926165	4673
ENSMUSG00000067949	transcribed_unprocessed_pseudogene	Vmn1r-ps144	ENSMUST00000236815	processed_transcript		17	1	20926165	4904
ENSMUSG00000041966	protein_coding	Dcaf17	ENSMUST00000135357	protein_coding		2	1	71055758	765
ENSMUSG00000067949	transcribed_unprocessed_pseudogene	Vmn1r-ps144	ENSMUST00000177291	transcribed_unprocessed_pseudogene		17	1	20933610	939
ENSMUSG00000117694	protein_coding	Snhg4	ENSMUST00000237592	protein_coding	principal5	18	1	35553410	1515
ENSMUSG00000033633	protein_coding	Clec18a	ENSMUST00000186384	nonsense_mediated_decay		8	-1	111082088	1878
ENSMUSG00000020544	protein_coding	Cox11	ENSMUST00000020851	protein_coding	principal2	11	1	90638173	1224
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000211197	nonsense_mediated_decay		8	-1	70608287	655
ENSMUSG00000062165	protein_coding	Vmn1r232	ENSMUST00000237554	protein_coding	principal1	17	-1	20919714	1722
ENSMUSG00000036504	protein_coding	Phpt1	ENSMUST00000039156	protein_coding	principal1	2	-1	25575224	937
ENSMUSG00000062165	protein_coding	Vmn1r232	ENSMUST00000237560	protein_coding	principal1	17	-1	20919714	1841
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000211608	protein_coding		8	-1	70608312	626
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000220488	retained_intron		13	1	73937857	3893
ENSMUSG00000117694	protein_coding	Snhg4	ENSMUST00000235585	processed_transcript		18	1	35553412	360
ENSMUSG00000033633	protein_coding	Clec18a	ENSMUST00000190222	nonsense_mediated_decay		8	-1	111092426	2685
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000192509	protein_coding	principal3	1	1	39901230	3918
ENSMUSG00000062165	protein_coding	Vmn1r232	ENSMUST00000077001	protein_coding	principal1	17	-1	20914363	1159
ENSMUSG00000117694	protein_coding	Snhg4	ENSMUST00000237907	processed_transcript		18	1	35553412	376
ENSMUSG00000020544	protein_coding	Cox11	ENSMUST00000099960	protein_coding	alternative2	11	1	90640178	773
ENSMUSG00000061809	protein_coding	Tbpl2	ENSMUST00000080453	protein_coding	principal1	2	-1	24096595	1379
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000210580	protein_coding		8	-1	70608302	711
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000223455	retained_intron		13	1	73938092	2799
ENSMUSG00000095263	protein_coding	Gm21094	ENSMUST00000189577	protein_coding	principal1	Y	-1	32620443	926
ENSMUSG00000041966	protein_coding	Dcaf17	ENSMUST00000064141	protein_coding	principal1	2	1	71055781	1905
ENSMUSG00000095263	protein_coding	Gm21094	ENSMUST00000177842	protein_coding		Y	-1	32619011	498
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000223063	retained_intron		13	1	73938110	826
ENSMUSG00000116974	lincRNA	Gm49761	ENSMUST00000232004	lincRNA		17	-1	20945149	658
ENSMUSG00000061809	protein_coding	Tbpl2	ENSMUST00000153338	protein_coding		2	-1	24096532	1119
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000193514	processed_transcript		1	1	39964155	384
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000211268	processed_transcript		8	-1	70608268	611
ENSMUSG00000114719	processed_pseudogene	Gm18134	ENSMUST00000225468	processed_pseudogene		13	1	98816752	400
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000222749	protein_coding		13	1	73938152	635
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000194163	processed_transcript		1	1	39964850	218
ENSMUSG00000117694	protein_coding	Snhg4	ENSMUST00000237230	protein_coding	alternative2	18	1	35553413	589
ENSMUSG00000036504	protein_coding	Phpt1	ENSMUST00000147096	processed_transcript		2	-1	25574878	656
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000211153	retained_intron		8	-1	70608041	340
ENSMUSG00000050933	protein_coding	Vmn1r231	ENSMUST00000235948	protein_coding	principal2	17	-1	20905091	2523
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000195356	retained_intron		1	1	39999595	411
ENSMUSG00000117694	protein_coding	Snhg4	ENSMUST00000237589	protein_coding	alternative2	18	1	35553422	601
ENSMUSG00000005891	protein_coding	Prl4a1	ENSMUST00000021779	protein_coding	principal1	13	1	28016212	876
ENSMUSG00000070003	protein_coding	Ssbp4	ENSMUST00000210756	retained_intron		8	-1	70608246	346
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000223525	protein_coding	alternative2	13	1	73938638	1111
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000192355	protein_coding		1	1	39999893	711
ENSMUSG00000050933	protein_coding	Vmn1r231	ENSMUST00000238096	protein_coding	alternative2	17	-1	20905091	2061
ENSMUSG00000117694	protein_coding	Snhg4	ENSMUST00000236097	processed_transcript		18	1	35553438	450
ENSMUSG00000040220	protein_coding	Gas8	ENSMUST00000093043	protein_coding	principal1	8	1	123518834	1681
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000223238	nonsense_mediated_decay		13	1	73940716	845
ENSMUSG00000036658	protein_coding	Olfr11	ENSMUST00000205631	protein_coding	principal1	13	-1	21642518	3265
ENSMUSG00000035783	protein_coding	Acta2	ENSMUST00000039631	protein_coding	principal1	19	-1	34255590	2035
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000191964	protein_coding		1	1	39999894	629
ENSMUSG00000050933	protein_coding	Vmn1r231	ENSMUST00000061278	protein_coding	principal2	17	-1	20890651	936
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000223446	retained_intron		13	1	73943896	2342
ENSMUSG00000036658	protein_coding	Olfr11	ENSMUST00000043081	protein_coding	principal1	13	-1	21639521	942
ENSMUSG00000028560	protein_coding	Usp1	ENSMUST00000030289	protein_coding	principal1	4	1	98923810	3577
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000191865	protein_coding		1	1	40000677	707
ENSMUSG00000084350	unprocessed_pseudogene	Znf41-ps	ENSMUST00000122051	unprocessed_pseudogene		4	1	145825237	2413
ENSMUSG00000040220	protein_coding	Gas8	ENSMUST00000212923	protein_coding		8	1	123518856	3469
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000220968	retained_intron		13	1	73945560	756
ENSMUSG00000041966	protein_coding	Dcaf17	ENSMUST00000112159	protein_coding		2	1	71055784	2490
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000192194	retained_intron		1	1	40007393	1937
ENSMUSG00000035783	protein_coding	Acta2	ENSMUST00000238147	protein_coding		19	-1	34254230	826
ENSMUSG00000074437	protein_coding	Defa29	ENSMUST00000098890	protein_coding	principal1	8	-1	21327020	508
ENSMUSG00000057649	protein_coding	Brd9	ENSMUST00000221324	retained_intron		13	1	73951187	1103
ENSMUSG00000096233	processed_pseudogene	Gm13238	ENSMUST00000117655	processed_pseudogene		4	1	145837219	780
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000192884	retained_intron		1	1	40013852	544
ENSMUSG00000049737	protein_coding	Olfr1361	ENSMUST00000214321	protein_coding	principal1	13	-1	21663386	2792
ENSMUSG00000041120	protein_coding	Nbl1	ENSMUST00000042844	protein_coding	principal1	4	-1	139092993	1793
ENSMUSG00000040220	protein_coding	Gas8	ENSMUST00000212809	retained_intron		8	1	123518939	1178
ENSMUSG00000106098	IG_V_pseudogene	Igkv14-118-2	ENSMUST00000198287	IG_V_pseudogene		6	1	68066369	339
ENSMUSG00000083235	processed_pseudogene	Gm13246	ENSMUST00000120994	processed_pseudogene		4	-1	145844718	315
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000191657	retained_intron		1	1	40023210	426
ENSMUSG00000049737	protein_coding	Olfr1361	ENSMUST00000055615	protein_coding	principal1	13	-1	21659321	954
ENSMUSG00000098068	processed_pseudogene	Gm7909	ENSMUST00000182688	processed_pseudogene		10	-1	31575013	614
ENSMUSG00000040270	protein_coding	Bach2	ENSMUST00000108180	protein_coding	principal1	4	1	32238804	8882
ENSMUSG00000028560	protein_coding	Usp1	ENSMUST00000091358	protein_coding	principal1	4	1	98923879	3527
ENSMUSG00000112338	TEC	Gm47693	ENSMUST00000219494	TEC		10	-1	31557440	1521
ENSMUSG00000106480	IG_V_pseudogene	Igkv14-118-1	ENSMUST00000198645	IG_V_pseudogene		6	1	68082675	334
ENSMUSG00000041120	protein_coding	Nbl1	ENSMUST00000132940	processed_transcript		4	-1	139092106	654
ENSMUSG00000110440	antisense	Gm45894	ENSMUST00000211940	antisense		8	1	122870174	651
ENSMUSG00000028560	protein_coding	Usp1	ENSMUST00000169053	protein_coding		4	1	98923964	317
ENSMUSG00000041120	protein_coding	Nbl1	ENSMUST00000132900	processed_transcript		4	-1	139092968	350
ENSMUSG00000026074	protein_coding	Map4k4	ENSMUST00000163854	protein_coding	alternative2	1	1	39900913	5782
ENSMUSG00000040270	protein_coding	Bach2	ENSMUST00000037416	protein_coding		4	1	32238950	3462
ENSMUSG00000028560	protein_coding	Usp1	ENSMUST00000125104	protein_coding		4	1	98928097	546
ENSMUSG00000110440	antisense	Gm45894	ENSMUST00000212728	antisense		8	1	122870549	1097
ENSMUSG00000040270	protein_coding	Bach2	ENSMUST00000149201	processed_transcript		4	1	32239077	336
ENSMUSG00000040270	protein_coding	Bach2	ENSMUST00000156430	processed_transcript		4	1	32247764	331
ENSMUSG00000041966	protein_coding	Dcaf17	ENSMUST00000112167	nonsense_mediated_decay		2	1	71055846	2061
ENSMUSG00000040270	protein_coding	Bach2	ENSMUST00000146748	processed_transcript		4	1	32501505	658
ENSMUSG00000105052	processed_transcript	Gm21655	ENSMUST00000199295	processed_transcript		5	-1	25926290	2975
ENSMUSG00000105052	processed_transcript	Gm21655	ENSMUST00000167847	processed_transcript		5	-1	25926215	411
ENSMUSG00000040270	protein_coding	Bach2	ENSMUST00000125263	processed_transcript		4	1	32574931	538
ENSMUSG00000040270	protein_coding	Bach2	ENSMUST00000171600	protein_coding	principal1	4	1	32417435	8493
ENSMUSG00000024910	protein_coding	Ctsw	ENSMUST00000025844	protein_coding	principal2	19	-1	5468507	1241
ENSMUSG00000021178	protein_coding	Psmc1	ENSMUST00000222374	processed_transcript		12	1	100110154	551
ENSMUSG00000006587	protein_coding	Snai3	ENSMUST00000006762	protein_coding	principal1	8	-1	122460733	1628
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000021913	protein_coding	principal1	13	-1	52929661	1320
ENSMUSG00000024910	protein_coding	Ctsw	ENSMUST00000236256	protein_coding	alternative2	19	-1	5468498	1142
ENSMUSG00000057163	protein_coding	Prss2	ENSMUST00000070380	protein_coding	principal1	6	1	41521787	815
ENSMUSG00000024910	protein_coding	Ctsw	ENSMUST00000237556	retained_intron		19	-1	5466325	464
ENSMUSG00000041966	protein_coding	Dcaf17	ENSMUST00000102701	protein_coding		2	1	71055852	1703
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000123599	protein_coding		13	-1	52929458	659
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000163571	protein_coding	principal1	15	1	79229173	2054
ENSMUSG00000084377	processed_pseudogene	Gm15302	ENSMUST00000117779	processed_pseudogene		8	1	21330947	2630
ENSMUSG00000087049	sense_intronic	Bach2it1	ENSMUST00000133451	sense_intronic		4	1	32251761	481
ENSMUSG00000024910	protein_coding	Ctsw	ENSMUST00000236091	retained_intron		19	-1	5466452	444
ENSMUSG00000028555	protein_coding	Ttc39a	ENSMUST00000064129	protein_coding	principal3	4	1	109407087	2356
ENSMUSG00000110395	processed_pseudogene	Gm4903	ENSMUST00000210462	processed_pseudogene		7	-1	10846141	405
ENSMUSG00000109683	processed_pseudogene	Gm7836	ENSMUST00000209730	processed_pseudogene		7	-1	10851194	432
ENSMUSG00000095668	TR_D_gene	Trbd1	ENSMUST00000178537	TR_D_gene	principal1	6	1	41533201	12
ENSMUSG00000041966	protein_coding	Dcaf17	ENSMUST00000136299	nonsense_mediated_decay		2	1	71063424	441
ENSMUSG00000028555	protein_coding	Ttc39a	ENSMUST00000106619	protein_coding		4	1	109407110	1778
ENSMUSG00000061013	protein_coding	Mkx	ENSMUST00000079788	protein_coding	principal1	18	-1	7004780	3650
ENSMUSG00000041966	protein_coding	Dcaf17	ENSMUST00000132619	processed_transcript		2	1	71075342	443
ENSMUSG00000086150	antisense	Bach2os	ENSMUST00000126225	antisense		4	-1	32571662	1661
ENSMUSG00000028555	protein_coding	Ttc39a	ENSMUST00000126797	processed_transcript		4	1	109407129	815
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000018295	protein_coding	principal1	15	1	79229382	1977
ENSMUSG00000086150	antisense	Bach2os	ENSMUST00000149084	antisense		4	-1	32571708	234
ENSMUSG00000063760	protein_coding	Rnf217	ENSMUST00000081989	protein_coding	principal1	10	-1	31609184	11013
ENSMUSG00000076483	TR_J_gene	Trbj1-1	ENSMUST00000103284	TR_J_gene	principal1	6	1	41533864	48
ENSMUSG00000028555	protein_coding	Ttc39a	ENSMUST00000153315	protein_coding		4	1	109414776	613
ENSMUSG00000061013	protein_coding	Mkx	ENSMUST00000188926	retained_intron		18	-1	6992988	684
ENSMUSG00000086150	antisense	Bach2os	ENSMUST00000136149	antisense		4	-1	32571617	687
ENSMUSG00000061013	protein_coding	Mkx	ENSMUST00000176608	protein_coding		18	-1	7003782	722
ENSMUSG00000082918	unprocessed_pseudogene	Defa-ps16	ENSMUST00000121939	unprocessed_pseudogene		8	1	21342586	171
ENSMUSG00000061013	protein_coding	Mkx	ENSMUST00000176757	retained_intron		18	-1	7004726	425
ENSMUSG00000028555	protein_coding	Ttc39a	ENSMUST00000106618	protein_coding	alternative2	4	1	109415648	1970
ENSMUSG00000087326	processed_transcript	Gm12503	ENSMUST00000146576	processed_transcript		4	1	44092632	3127
ENSMUSG00000117652	sense_overlapping	Gm2350	ENSMUST00000176586	sense_overlapping		18	-1	6936621	479
ENSMUSG00000028555	protein_coding	Ttc39a	ENSMUST00000150909	processed_transcript		4	1	109415774	403
ENSMUSG00000076484	TR_J_gene	Trbj1-2	ENSMUST00000103285	TR_J_gene	principal1	6	1	41534001	48
ENSMUSG00000030588	protein_coding	Yif1b	ENSMUST00000108238	protein_coding	alternative2	7	1	29238329	1126
ENSMUSG00000117861	antisense	1810058N15Rik	ENSMUST00000236036	antisense		19	1	5560260	712
ENSMUSG00000028555	protein_coding	Ttc39a	ENSMUST00000139237	protein_coding		4	1	109420942	614
ENSMUSG00000101032	transcribed_unprocessed_pseudogene	Gm29377	ENSMUST00000185892	processed_transcript		Y	1	66373890	1161
ENSMUSG00000096272	lincRNA	Gm21588	ENSMUST00000188721	lincRNA		Y	-1	32713192	174
ENSMUSG00000096272	lincRNA	Gm21588	ENSMUST00000180074	lincRNA		Y	-1	32713186	498
ENSMUSG00000026985	protein_coding	Il1f8	ENSMUST00000028363	protein_coding	principal1	2	1	24153161	1217
ENSMUSG00000109695	transcribed_processed_pseudogene	Gm31166	ENSMUST00000210638	processed_transcript		19	1	5512528	1268
ENSMUSG00000109695	transcribed_processed_pseudogene	Gm31166	ENSMUST00000211026	processed_transcript		19	1	5531630	300
ENSMUSG00000109695	transcribed_processed_pseudogene	Gm31166	ENSMUST00000209326	transcribed_processed_pseudogene		19	1	5542360	288
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000159236	protein_coding	alternative1	3	1	28263215	12276
ENSMUSG00000030588	protein_coding	Yif1b	ENSMUST00000032809	protein_coding	principal3	7	1	29238353	1111
ENSMUSG00000039530	protein_coding	Tusc3	ENSMUST00000209440	protein_coding	principal1	8	1	39005845	1535
ENSMUSG00000101032	transcribed_unprocessed_pseudogene	Gm29377	ENSMUST00000189852	processed_transcript		Y	1	66373974	543
ENSMUSG00000108534	protein_coding	Olfr1360	ENSMUST00000205788	protein_coding	principal1	13	-1	21677405	1988
ENSMUSG00000101032	transcribed_unprocessed_pseudogene	Gm29377	ENSMUST00000190756	processed_transcript		Y	1	66373976	120
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000161214	retained_intron		3	1	28263276	2220
ENSMUSG00000108534	protein_coding	Olfr1360	ENSMUST00000216083	protein_coding	principal1	13	-1	21677405	2315
ENSMUSG00000101032	transcribed_unprocessed_pseudogene	Gm29377	ENSMUST00000189415	processed_transcript		Y	1	66373978	249
ENSMUSG00000030588	protein_coding	Yif1b	ENSMUST00000108237	protein_coding		7	1	29238452	1086
ENSMUSG00000101032	transcribed_unprocessed_pseudogene	Gm29377	ENSMUST00000186058	processed_transcript		Y	1	66373978	302
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000161234	retained_intron		3	1	28263276	658
ENSMUSG00000108534	protein_coding	Olfr1360	ENSMUST00000079135	protein_coding	principal1	13	-1	21674980	980
ENSMUSG00000101032	transcribed_unprocessed_pseudogene	Gm29377	ENSMUST00000189603	transcribed_unprocessed_pseudogene		Y	1	66375493	615
ENSMUSG00000025576	protein_coding	Rbfox3	ENSMUST00000117731	protein_coding	alternative2	11	-1	118909550	3084
ENSMUSG00000030588	protein_coding	Yif1b	ENSMUST00000138128	protein_coding	alternative2	7	1	29238473	816
ENSMUSG00000101032	transcribed_unprocessed_pseudogene	Gm29377	ENSMUST00000190996	processed_transcript		Y	1	66375930	229
ENSMUSG00000030588	protein_coding	Yif1b	ENSMUST00000142519	protein_coding		7	1	29238527	1153
ENSMUSG00000101032	transcribed_unprocessed_pseudogene	Gm29377	ENSMUST00000186963	processed_transcript		Y	1	66375930	327
ENSMUSG00000039530	protein_coding	Tusc3	ENSMUST00000211241	nonsense_mediated_decay		8	1	39005908	1264
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000128380	retained_intron		13	-1	52929648	1400
ENSMUSG00000039000	protein_coding	Ube3c	ENSMUST00000049453	protein_coding	principal1	5	1	29569242	5048
ENSMUSG00000109900	processed_pseudogene	Gm18638	ENSMUST00000211293	processed_pseudogene		7	-1	10885254	1773
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000120535	protein_coding		13	-1	52929652	1647
ENSMUSG00000104824	protein_coding	Gm21663	ENSMUST00000196214	protein_coding	principal1	5	-1	25942381	2864
ENSMUSG00000039000	protein_coding	Ube3c	ENSMUST00000199032	protein_coding		5	1	29569446	3171
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000132598	processed_transcript		13	-1	52923865	793
ENSMUSG00000101010	unprocessed_pseudogene	Gm21889	ENSMUST00000188487	unprocessed_pseudogene		Y	1	66407337	695
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000162037	retained_intron		3	1	28263563	4276
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000119311	protein_coding		13	-1	52929654	2627
ENSMUSG00000039530	protein_coding	Tusc3	ENSMUST00000209970	retained_intron		8	1	39005910	2667
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000165609	retained_intron		15	1	79229411	2559
ENSMUSG00000025746	protein_coding	Il6	ENSMUST00000026845	protein_coding	principal2	5	1	30013114	1141
ENSMUSG00000039530	protein_coding	Tusc3	ENSMUST00000210890	protein_coding		8	1	39046585	588
ENSMUSG00000024922	protein_coding	Ovol1	ENSMUST00000025861	protein_coding	principal1	19	-1	5560646	2972
ENSMUSG00000039000	protein_coding	Ube3c	ENSMUST00000197193	retained_intron		5	1	29569486	3490
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000142515	processed_transcript		13	-1	52923844	676
ENSMUSG00000025746	protein_coding	Il6	ENSMUST00000199183	protein_coding		5	1	30013144	2343
ENSMUSG00000024922	protein_coding	Ovol1	ENSMUST00000238060	protein_coding		19	-1	5559403	728
ENSMUSG00000030587	protein_coding	2200002D01Rik	ENSMUST00000032808	protein_coding	principal1	7	-1	29248466	1466
ENSMUSG00000039000	protein_coding	Ube3c	ENSMUST00000197953	processed_transcript		5	1	29590829	670
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000128544	processed_transcript		13	-1	52919268	610
ENSMUSG00000044951	protein_coding	Mylk4	ENSMUST00000238977	protein_coding	alternative2	13	-1	32783954	6570
ENSMUSG00000039000	protein_coding	Ube3c	ENSMUST00000199598	retained_intron		5	1	29630913	1572
ENSMUSG00000025746	protein_coding	Il6	ENSMUST00000195978	protein_coding		5	1	30013168	651
ENSMUSG00000102065	unprocessed_pseudogene	Gm28302	ENSMUST00000187931	unprocessed_pseudogene		Y	-1	70050165	697
ENSMUSG00000044951	protein_coding	Mylk4	ENSMUST00000230119	protein_coding		13	-1	32776413	1541
ENSMUSG00000039530	protein_coding	Tusc3	ENSMUST00000167992	protein_coding	principal1	8	1	39005867	1511
ENSMUSG00000044951	protein_coding	Mylk4	ENSMUST00000229922	retained_intron		13	-1	32776549	1357
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000110031	protein_coding		13	-1	52929681	3235
ENSMUSG00000030587	protein_coding	2200002D01Rik	ENSMUST00000151339	retained_intron		7	-1	29248338	443
ENSMUSG00000025746	protein_coding	Il6	ENSMUST00000199765	protein_coding	alternative2	5	1	30013321	963
ENSMUSG00000044951	protein_coding	Mylk4	ENSMUST00000132206	processed_transcript		13	-1	32783954	709
ENSMUSG00000083878	processed_pseudogene	Gm12034	ENSMUST00000119032	processed_pseudogene		11	1	20446412	399
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000230563	protein_coding		13	-1	52912946	223
ENSMUSG00000117238	processed_transcript	AC139131.1	ENSMUST00000232806	retained_intron		7	-1	12640299	7600
ENSMUSG00000039530	protein_coding	Tusc3	ENSMUST00000169034	protein_coding		8	1	39005908	1262
ENSMUSG00000085616	lincRNA	Gm13850	ENSMUST00000140465	lincRNA		6	1	32112143	623
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000150641	retained_intron		15	1	99295239	4065
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000133906	processed_transcript		13	-1	52923868	492
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000169548	retained_intron		15	1	79229416	2325
ENSMUSG00000044951	protein_coding	Mylk4	ENSMUST00000057428	protein_coding	principal2	13	-1	32781779	5641
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000153329	retained_intron		13	-1	52923860	498
ENSMUSG00000104532	IG_V_pseudogene	Gm43739	ENSMUST00000198294	IG_V_pseudogene		6	1	68100569	307
ENSMUSG00000021460	protein_coding	Auh	ENSMUST00000151469	processed_transcript		13	-1	52929652	649
ENSMUSG00000096593	protein_coding	Vmn2r54	ENSMUST00000233287	protein_coding	alternative2	7	-1	12640319	4258
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000166417	processed_transcript		15	1	79229458	2421
ENSMUSG00000030417	protein_coding	Pdcd5	ENSMUST00000118501	protein_coding	principal1	7	-1	35647521	684
ENSMUSG00000115701	protein_coding	Vmn1r6	ENSMUST00000228285	protein_coding	principal2	6	1	56997243	7950
ENSMUSG00000109473	lincRNA	B930025P03Rik	ENSMUST00000207718	lincRNA		8	-1	10882454	3085
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000171365	retained_intron		15	1	79229505	569
ENSMUSG00000021178	protein_coding	Psmc1	ENSMUST00000021595	protein_coding	principal1	12	1	100110154	1591
ENSMUSG00000029679	protein_coding	Hyal6	ENSMUST00000031690	protein_coding	principal1	6	1	24733245	3452
ENSMUSG00000115701	protein_coding	Vmn1r6	ENSMUST00000227847	protein_coding	principal2	6	1	56997243	8073
ENSMUSG00000096593	protein_coding	Vmn2r54	ENSMUST00000086210	protein_coding	principal2	7	-1	12636134	2421
ENSMUSG00000096295	protein_coding	Defa2	ENSMUST00000170275	protein_coding	principal1	8	1	21378515	426
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000166155	protein_coding	principal1	15	1	79229702	1699
ENSMUSG00000109473	lincRNA	B930025P03Rik	ENSMUST00000208358	lincRNA		8	-1	10882435	1894
ENSMUSG00000115701	protein_coding	Vmn1r6	ENSMUST00000226689	protein_coding	principal2	6	1	56997243	8453
ENSMUSG00000021178	protein_coding	Psmc1	ENSMUST00000223078	processed_transcript		12	1	100110215	700
ENSMUSG00000030417	protein_coding	Pdcd5	ENSMUST00000120714	protein_coding		7	-1	35647209	767
ENSMUSG00000115701	protein_coding	Vmn1r6	ENSMUST00000227131	protein_coding	principal2	6	1	56997243	8330
ENSMUSG00000021178	protein_coding	Psmc1	ENSMUST00000221308	retained_intron		12	1	100119934	381
ENSMUSG00000100278	lincRNA	Gm28082	ENSMUST00000185683	lincRNA		Y	1	70089894	1499
ENSMUSG00000115701	protein_coding	Vmn1r6	ENSMUST00000227631	protein_coding	alternative2	6	1	56997243	7805
ENSMUSG00000107076	sense_intronic	Gm43480	ENSMUST00000201201	sense_intronic		5	-1	134299213	416
ENSMUSG00000058297	protein_coding	Spock2	ENSMUST00000138976	retained_intron		10	1	60106219	1460
ENSMUSG00000115701	protein_coding	Vmn1r6	ENSMUST00000227188	protein_coding	alternative2	6	1	56997243	8185
ENSMUSG00000107000	TEC	Gm43481	ENSMUST00000201715	TEC		5	-1	134270736	3672
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000168513	retained_intron		15	1	79242968	802
ENSMUSG00000100278	lincRNA	Gm28082	ENSMUST00000190608	lincRNA		Y	1	70090348	437
ENSMUSG00000030417	protein_coding	Pdcd5	ENSMUST00000151336	retained_intron		7	-1	35643044	602
ENSMUSG00000037254	protein_coding	Itih2	ENSMUST00000161909	protein_coding		2	-1	10131396	391
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000172162	retained_intron		15	1	79244877	1664
ENSMUSG00000115701	protein_coding	Vmn1r6	ENSMUST00000079669	protein_coding	principal2	6	1	57002300	1058
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000113954	retained_intron		15	1	79245274	776
ENSMUSG00000030417	protein_coding	Pdcd5	ENSMUST00000126734	retained_intron		7	-1	35643855	474
ENSMUSG00000107130	unprocessed_pseudogene	Gm43264	ENSMUST00000202284	unprocessed_pseudogene		6	-1	28466981	325
ENSMUSG00000095339	protein_coding	Zscan4b	ENSMUST00000210847	protein_coding	principal1	7	-1	10905027	1779
ENSMUSG00000095339	protein_coding	Zscan4b	ENSMUST00000168158	protein_coding	principal1	7	-1	10905050	1754
ENSMUSG00000068206	protein_coding	Pick1	ENSMUST00000171581	retained_intron		15	1	79246335	1944
ENSMUSG00000091135	transcribed_processed_pseudogene	Lgals1-ps2	ENSMUST00000170221	transcribed_processed_pseudogene		15	1	79255574	519
ENSMUSG00000100447	unprocessed_pseudogene	Gm29378	ENSMUST00000188723	unprocessed_pseudogene		Y	-1	66518276	315
ENSMUSG00000109971	processed_pseudogene	Gm45279	ENSMUST00000210315	processed_pseudogene		7	1	10908911	391
ENSMUSG00000030417	protein_coding	Pdcd5	ENSMUST00000127213	retained_intron		7	-1	35647504	832
ENSMUSG00000030417	protein_coding	Pdcd5	ENSMUST00000130306	retained_intron		7	-1	35647480	438
ENSMUSG00000030417	protein_coding	Pdcd5	ENSMUST00000130340	retained_intron		7	-1	35647466	675
ENSMUSG00000020623	protein_coding	Map2k6	ENSMUST00000020949	protein_coding	principal1	11	1	110399122	2068
ENSMUSG00000031453	protein_coding	Rasa3	ENSMUST00000117551	protein_coding	principal1	8	-1	13677603	4404
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000130575	retained_intron		15	1	99295241	2740
ENSMUSG00000057135	protein_coding	Scimp	ENSMUST00000108534	protein_coding	principal1	11	-1	70812586	1080
ENSMUSG00000113349	TEC	Gm48369	ENSMUST00000222844	TEC		12	-1	36147922	1740
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000160307	protein_coding	principal4	3	1	28263563	4404
ENSMUSG00000113511	processed_pseudogene	Gm19046	ENSMUST00000221263	processed_pseudogene		12	1	36172368	1298
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000138036	retained_intron		15	1	99295241	2993
ENSMUSG00000113732	processed_pseudogene	Gm18115	ENSMUST00000221209	processed_pseudogene		12	1	36115082	621
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000159680	protein_coding	alternative1	3	1	28263563	4380
ENSMUSG00000057135	protein_coding	Scimp	ENSMUST00000074572	protein_coding		11	-1	70812559	617
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000140806	nonsense_mediated_decay		15	1	99295244	1000
ENSMUSG00000031453	protein_coding	Rasa3	ENSMUST00000137822	retained_intron		8	-1	13584038	3023
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000195094	retained_intron		3	1	28263582	1285
ENSMUSG00000032988	protein_coding	Slc16a8	ENSMUST00000039752	protein_coding	principal1	15	-1	79254761	1806
ENSMUSG00000031453	protein_coding	Rasa3	ENSMUST00000127418	retained_intron		8	-1	13578043	336
ENSMUSG00000031453	protein_coding	Rasa3	ENSMUST00000132637	retained_intron		8	-1	13606108	405
ENSMUSG00000032988	protein_coding	Slc16a8	ENSMUST00000230477	retained_intron		15	-1	79252718	1697
ENSMUSG00000026028	protein_coding	Trak2	ENSMUST00000027186	protein_coding	principal2	1	-1	58973430	6189
ENSMUSG00000025576	protein_coding	Rbfox3	ENSMUST00000103023	protein_coding	alternative2	11	-1	118761041	2809
ENSMUSG00000026028	protein_coding	Trak2	ENSMUST00000174120	protein_coding	alternative2	1	-1	58946337	2636
ENSMUSG00000031453	protein_coding	Rasa3	ENSMUST00000154454	nonsense_mediated_decay		8	-1	13677451	617
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000160518	protein_coding	alternative1	3	1	28263643	3996
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000162485	protein_coding		3	1	28263643	3918
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000159308	protein_coding		3	1	28263643	3831
ENSMUSG00000031453	protein_coding	Rasa3	ENSMUST00000132439	retained_intron		8	-1	13677483	604
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000162777	protein_coding		3	1	28263643	3894
ENSMUSG00000026028	protein_coding	Trak2	ENSMUST00000172685	retained_intron		1	-1	58907212	1018
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000161964	protein_coding		3	1	28263643	3807
ENSMUSG00000114182	unprocessed_pseudogene	Gm47019	ENSMUST00000223339	unprocessed_pseudogene		13	1	28072061	574
ENSMUSG00000026028	protein_coding	Trak2	ENSMUST00000174359	processed_transcript		1	-1	58921697	250
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000161423	processed_transcript		3	1	28409431	1340
ENSMUSG00000026028	protein_coding	Trak2	ENSMUST00000173590	protein_coding		1	-1	58973429	547
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000193721	retained_intron		3	1	28538278	1815
ENSMUSG00000026028	protein_coding	Trak2	ENSMUST00000173719	retained_intron		1	-1	58973430	828
ENSMUSG00000025576	protein_coding	Rbfox3	ENSMUST00000017576	protein_coding	principal4	11	-1	118909572	3150
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000162225	retained_intron		3	1	28629872	826
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000159733	retained_intron		3	1	28650027	967
ENSMUSG00000027692	protein_coding	Tnik	ENSMUST00000192205	retained_intron		3	1	28666846	1904
ENSMUSG00000103420	TEC	Gm37537	ENSMUST00000192154	TEC		3	1	28324357	1738
ENSMUSG00000025576	protein_coding	Rbfox3	ENSMUST00000069343	protein_coding		11	-1	118911597	1553
ENSMUSG00000058297	protein_coding	Spock2	ENSMUST00000121820	protein_coding	principal2	10	1	60106219	5238
ENSMUSG00000052221	protein_coding	Ppp1r36	ENSMUST00000063977	protein_coding	principal1	12	1	76417538	1515
ENSMUSG00000025576	protein_coding	Rbfox3	ENSMUST00000106278	protein_coding	alternative2	11	-1	118909550	1542
ENSMUSG00000058297	protein_coding	Spock2	ENSMUST00000165024	protein_coding	alternative2	10	1	60106468	3699
ENSMUSG00000001305	protein_coding	Rrp15	ENSMUST00000001339	protein_coding	principal1	1	-1	186749358	1321
ENSMUSG00000110424	processed_transcript	1700012D14Rik	ENSMUST00000209597	lincRNA		7	-1	111122537	605
ENSMUSG00000025576	protein_coding	Rbfox3	ENSMUST00000120061	protein_coding	alternative2	11	-1	118909552	2150
ENSMUSG00000106924	processed_pseudogene	Gm42857	ENSMUST00000200823	processed_pseudogene		5	-1	39003031	339
ENSMUSG00000048834	protein_coding	Vstm2a	ENSMUST00000109645	protein_coding	principal1	11	1	16257724	3264
ENSMUSG00000118258	processed_pseudogene	Gm19076	ENSMUST00000237352	processed_pseudogene		18	-1	63899031	700
ENSMUSG00000110424	processed_transcript	1700012D14Rik	ENSMUST00000210788	lincRNA		7	-1	111122684	547
ENSMUSG00000106331	processed_pseudogene	Gm5309	ENSMUST00000197416	processed_pseudogene		6	-1	68103466	677
ENSMUSG00000020623	protein_coding	Map2k6	ENSMUST00000146084	processed_transcript		11	1	110399259	1869
ENSMUSG00000025576	protein_coding	Rbfox3	ENSMUST00000154746	protein_coding		11	-1	118507353	710
ENSMUSG00000110424	processed_transcript	1700012D14Rik	ENSMUST00000209959	lincRNA		7	-1	111122675	629
ENSMUSG00000118066	processed_pseudogene	Gm50239	ENSMUST00000236383	processed_pseudogene		19	-1	34284537	258
ENSMUSG00000117795	processed_pseudogene	Gm50104	ENSMUST00000235365	processed_pseudogene		18	-1	63714490	494
ENSMUSG00000110424	processed_transcript	1700012D14Rik	ENSMUST00000210340	retained_intron		7	-1	111122681	3434
ENSMUSG00000052221	protein_coding	Ppp1r36	ENSMUST00000218732	retained_intron		12	1	76417621	2738
ENSMUSG00000020623	protein_coding	Map2k6	ENSMUST00000100260	protein_coding		11	1	110399122	2088
ENSMUSG00000025576	protein_coding	Rbfox3	ENSMUST00000136551	protein_coding		11	-1	118569910	900
ENSMUSG00000118555	transcribed_processed_pseudogene	AC150312.1	ENSMUST00000238860	transcribed_processed_pseudogene		7	-1	111119594	1816
ENSMUSG00000001305	protein_coding	Rrp15	ENSMUST00000162336	retained_intron		1	-1	186749325	3092
ENSMUSG00000025576	protein_coding	Rbfox3	ENSMUST00000128863	processed_transcript		11	-1	118888689	301
ENSMUSG00000052221	protein_coding	Ppp1r36	ENSMUST00000220187	protein_coding		12	1	76417626	504
ENSMUSG00000110326	TEC	Gm45378	ENSMUST00000211063	TEC		7	-1	111092816	2711
ENSMUSG00000106794	lincRNA	Gm40293	ENSMUST00000202596	lincRNA		5	-1	39307084	485
ENSMUSG00000048834	protein_coding	Vstm2a	ENSMUST00000109647	protein_coding		11	1	16257803	1745
ENSMUSG00000052221	protein_coding	Ppp1r36	ENSMUST00000219251	retained_intron		12	1	76435713	768
ENSMUSG00000025576	protein_coding	Rbfox3	ENSMUST00000134774	processed_transcript		11	-1	118908005	369
ENSMUSG00000106644	lincRNA	Gm40331	ENSMUST00000198430	lincRNA		5	1	126852757	217
ENSMUSG00000048834	protein_coding	Vstm2a	ENSMUST00000208926	protein_coding		11	1	16258063	1039
ENSMUSG00000107031	lincRNA	Gm40292	ENSMUST00000202383	lincRNA		5	1	39307120	553
ENSMUSG00000084887	sense_intronic	Gm11749	ENSMUST00000127327	sense_intronic		11	-1	118867220	184
ENSMUSG00000105782	TEC	Gm42955	ENSMUST00000197355	TEC		5	1	127020227	3393
ENSMUSG00000104934	IG_V_pseudogene	Igkv11-118	ENSMUST00000199448	IG_V_pseudogene		6	1	68105414	346
ENSMUSG00000116475	processed_pseudogene	Gm19945	ENSMUST00000229700	processed_pseudogene		15	1	76150368	240
ENSMUSG00000020623	protein_coding	Map2k6	ENSMUST00000133920	processed_transcript		11	1	110479039	1074
ENSMUSG00000048834	protein_coding	Vstm2a	ENSMUST00000208440	processed_transcript		11	1	16260591	736
ENSMUSG00000106876	processed_pseudogene	Gm43456	ENSMUST00000202519	processed_pseudogene		5	-1	39337816	457
ENSMUSG00000097784	lincRNA	A430105J06Rik	ENSMUST00000180869	lincRNA		1	1	186749396	1275
ENSMUSG00000020623	protein_coding	Map2k6	ENSMUST00000146540	processed_transcript		11	1	110477377	925
ENSMUSG00000109808	lincRNA	5430402P08Rik	ENSMUST00000211799	lincRNA		7	1	111366298	1143
ENSMUSG00000048834	protein_coding	Vstm2a	ENSMUST00000207256	protein_coding		11	1	16263218	2882
ENSMUSG00000109867	processed_pseudogene	Gm5338	ENSMUST00000209530	processed_pseudogene		7	-1	111387332	639
ENSMUSG00000109922	processed_pseudogene	Gm20948	ENSMUST00000211091	processed_pseudogene		8	1	39201049	449
ENSMUSG00000045767	protein_coding	B230219D22Rik	ENSMUST00000057844	protein_coding	principal1	13	1	55693124	4652
ENSMUSG00000103503	lincRNA	1700023G09Rik	ENSMUST00000194513	lincRNA		1	1	186926933	1460
ENSMUSG00000105490	lincRNA	4933438B17Rik	ENSMUST00000196374	lincRNA		5	1	127027377	576
ENSMUSG00000103503	lincRNA	1700023G09Rik	ENSMUST00000194671	lincRNA		1	1	186926962	308
ENSMUSG00000043418	protein_coding	Lrit2	ENSMUST00000224104	processed_transcript		14	1	37067929	750
ENSMUSG00000094335	IG_V_gene	Igkv1-117	ENSMUST00000103317	IG_V_gene	principal1	6	1	68121046	404
ENSMUSG00000107030	processed_pseudogene	Gm5291	ENSMUST00000201965	processed_pseudogene		5	-1	39402245	899
ENSMUSG00000105490	lincRNA	4933438B17Rik	ENSMUST00000196336	lincRNA		5	1	127030783	1169
ENSMUSG00000106851	TEC	4930421C12Rik	ENSMUST00000200814	TEC		5	-1	39443574	1574
ENSMUSG00000057134	protein_coding	Ado	ENSMUST00000075686	protein_coding	principal1	10	-1	67549068	4558
ENSMUSG00000105490	lincRNA	4933438B17Rik	ENSMUST00000197983	lincRNA		5	1	127030790	524
ENSMUSG00000110153	processed_pseudogene	Gm17766	ENSMUST00000209223	processed_pseudogene		8	1	39204018	442
ENSMUSG00000100190	protein_coding	Krtap28-10	ENSMUST00000188323	protein_coding	principal1	1	-1	83042480	957
ENSMUSG00000038525	protein_coding	Armc10	ENSMUST00000148873	protein_coding		5	1	21645813	1167
ENSMUSG00000091402	protein_coding	Rd3l	ENSMUST00000189759	protein_coding	principal1	12	-1	111981317	1427
ENSMUSG00000043418	protein_coding	Lrit2	ENSMUST00000057176	protein_coding	principal1	14	1	37068048	2790
ENSMUSG00000028453	protein_coding	Fancg	ENSMUST00000030165	protein_coding	principal1	4	-1	43010355	2771
ENSMUSG00000073000	lincRNA	Gm10451	ENSMUST00000219367	lincRNA		12	1	76444497	855
ENSMUSG00000105575	lincRNA	Gm43475	ENSMUST00000196673	lincRNA		5	1	127108069	400
ENSMUSG00000091402	protein_coding	Rd3l	ENSMUST00000190680	protein_coding		12	-1	111980143	735
ENSMUSG00000022537	protein_coding	Tmem44	ENSMUST00000144491	retained_intron		16	-1	30549946	4579
ENSMUSG00000073000	lincRNA	Gm10451	ENSMUST00000101281	lincRNA		12	1	76444560	1598
ENSMUSG00000113267	protein_coding	Gm47969	ENSMUST00000222567	protein_coding	principal1	1	1	83044932	1015
ENSMUSG00000104423	protein_coding	A030005K14Rik	ENSMUST00000193762	protein_coding	principal1	1	-1	83059378	1093
ENSMUSG00000073000	lincRNA	Gm10451	ENSMUST00000220043	lincRNA		12	1	76449698	818
ENSMUSG00000091402	protein_coding	Rd3l	ENSMUST00000190536	protein_coding	principal1	12	-1	111981054	1242
ENSMUSG00000101315	protein_coding	Krtap28-13	ENSMUST00000188005	protein_coding	principal1	1	1	83060930	992
ENSMUSG00000059708	protein_coding	Akap17b	ENSMUST00000133980	protein_coding		X	-1	36645096	1370
ENSMUSG00000112141	lincRNA	4930563J15Rik	ENSMUST00000218306	lincRNA		10	-1	67571989	3468
ENSMUSG00000112141	lincRNA	4930563J15Rik	ENSMUST00000219752	lincRNA		10	-1	67570038	560
ENSMUSG00000099691	processed_pseudogene	Gm29518	ENSMUST00000190858	processed_pseudogene		1	1	83067102	372
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000131780	protein_coding	principal3	18	1	80253292	2080
ENSMUSG00000091402	protein_coding	Rd3l	ENSMUST00000170525	protein_coding	principal1	12	-1	111980469	984
ENSMUSG00000022537	protein_coding	Tmem44	ENSMUST00000089775	nonsense_mediated_decay		16	-1	30550570	4331
ENSMUSG00000053025	protein_coding	Sv2b	ENSMUST00000165175	protein_coding	principal1	7	-1	75309262	5524
ENSMUSG00000112141	lincRNA	4930563J15Rik	ENSMUST00000219796	lincRNA		10	-1	67571959	574
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000100037	protein_coding	alternative2	2	-1	71055583	2254
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000157056	protein_coding		18	1	80253342	672
ENSMUSG00000112167	processed_pseudogene	Gm47053	ENSMUST00000218608	processed_pseudogene		12	1	76492355	157
ENSMUSG00000041977	protein_coding	Arhgef11	ENSMUST00000039476	protein_coding	principal1	3	1	87617575	6776
ENSMUSG00000091402	protein_coding	Rd3l	ENSMUST00000185354	protein_coding		12	-1	111981102	1541
ENSMUSG00000020978	protein_coding	Klhdc2	ENSMUST00000151571	retained_intron		12	1	69296681	1369
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000047282	protein_coding	principal3	8	-1	121108318	8312
ENSMUSG00000053025	protein_coding	Sv2b	ENSMUST00000085164	protein_coding	principal1	7	-1	75308379	5307
ENSMUSG00000105308	lincRNA	4930572K03Rik	ENSMUST00000196995	lincRNA		5	1	127170560	748
ENSMUSG00000020134	protein_coding	Peli1	ENSMUST00000093290	protein_coding	principal1	11	1	21091291	3514
ENSMUSG00000041977	protein_coding	Arhgef11	ENSMUST00000129113	protein_coding		3	1	87617585	5603
ENSMUSG00000035860	protein_coding	Cdhr3	ENSMUST00000095774	protein_coding	principal1	12	-1	33092875	2953
ENSMUSG00000053025	protein_coding	Sv2b	ENSMUST00000206344	protein_coding	principal1	7	-1	75220019	3910
ENSMUSG00000105308	lincRNA	4930572K03Rik	ENSMUST00000196713	lincRNA		5	1	127170565	931
ENSMUSG00000038525	protein_coding	Armc10	ENSMUST00000072896	protein_coding	principal1	5	1	21645879	2221
ENSMUSG00000020134	protein_coding	Peli1	ENSMUST00000101477	protein_coding	principal1	11	1	21135469	3703
ENSMUSG00000104778	lincRNA	Gm43476	ENSMUST00000197873	lincRNA		5	-1	127201097	405
ENSMUSG00000035860	protein_coding	Cdhr3	ENSMUST00000219453	processed_transcript		12	-1	33060261	604
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000123750	protein_coding	alternative1	18	1	80255245	2004
ENSMUSG00000059708	protein_coding	Akap17b	ENSMUST00000051906	protein_coding	principal1	X	-1	36645395	6003
ENSMUSG00000038525	protein_coding	Armc10	ENSMUST00000146599	processed_transcript		5	1	21646017	404
ENSMUSG00000053025	protein_coding	Sv2b	ENSMUST00000207001	nonsense_mediated_decay		7	-1	75147726	994
ENSMUSG00000035860	protein_coding	Cdhr3	ENSMUST00000219158	processed_transcript		12	-1	33052986	1209
ENSMUSG00000041977	protein_coding	Arhgef11	ENSMUST00000142799	retained_intron		3	1	87617592	3584
ENSMUSG00000020134	protein_coding	Peli1	ENSMUST00000156122	retained_intron		11	1	21091291	1108
ENSMUSG00000038525	protein_coding	Armc10	ENSMUST00000095495	protein_coding		5	1	21646053	2700
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000133058	processed_transcript		8	-1	121101185	520
ENSMUSG00000035860	protein_coding	Cdhr3	ENSMUST00000219065	retained_intron		12	-1	33061792	881
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000144468	protein_coding		18	1	80255836	1050
ENSMUSG00000024378	protein_coding	Stard4	ENSMUST00000025236	protein_coding	principal1	18	-1	33213862	5097
ENSMUSG00000038525	protein_coding	Armc10	ENSMUST00000139521	retained_intron		5	1	21648513	524
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000129043	protein_coding	alternative1	18	1	80256284	1864
ENSMUSG00000028453	protein_coding	Fancg	ENSMUST00000123332	retained_intron		4	-1	43010488	2974
ENSMUSG00000084762	lincRNA	Platr3	ENSMUST00000146980	lincRNA		2	1	135648907	412
ENSMUSG00000020134	protein_coding	Peli1	ENSMUST00000149675	retained_intron		11	1	21092118	3529
ENSMUSG00000084274	transcribed_processed_pseudogene	Gm12504	ENSMUST00000120860	processed_transcript		4	1	44121893	2231
ENSMUSG00000028453	protein_coding	Fancg	ENSMUST00000148018	retained_intron		4	-1	43003932	877
ENSMUSG00000084362	processed_pseudogene	2610024D14Rik	ENSMUST00000121233	processed_pseudogene		11	1	21099534	294
ENSMUSG00000084274	transcribed_processed_pseudogene	Gm12504	ENSMUST00000148026	transcribed_processed_pseudogene		4	1	44123238	306
ENSMUSG00000053025	protein_coding	Sv2b	ENSMUST00000206845	processed_transcript		7	-1	75161269	413
ENSMUSG00000028042	protein_coding	Zbtb7b	ENSMUST00000107433	protein_coding	principal1	3	-1	89387189	3650
ENSMUSG00000028453	protein_coding	Fancg	ENSMUST00000124645	processed_transcript		4	-1	43006466	727
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000151677	protein_coding		18	1	80256288	3192
ENSMUSG00000024378	protein_coding	Stard4	ENSMUST00000119991	protein_coding		18	-1	33213766	941
ENSMUSG00000053025	protein_coding	Sv2b	ENSMUST00000206675	processed_transcript		7	-1	75164628	422
ENSMUSG00000028453	protein_coding	Fancg	ENSMUST00000127067	processed_transcript		4	-1	43006511	664
ENSMUSG00000041977	protein_coding	Arhgef11	ENSMUST00000152006	nonsense_mediated_decay		3	1	87618101	6124
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000134545	protein_coding		18	1	80256307	3258
ENSMUSG00000028453	protein_coding	Fancg	ENSMUST00000125570	processed_transcript		4	-1	43006779	539
ENSMUSG00000028042	protein_coding	Zbtb7b	ENSMUST00000107435	protein_coding	principal1	3	-1	89387671	4333
ENSMUSG00000041977	protein_coding	Arhgef11	ENSMUST00000212015	protein_coding		3	1	87618761	615
ENSMUSG00000053025	protein_coding	Sv2b	ENSMUST00000206236	retained_intron		7	-1	75308309	3246
ENSMUSG00000024378	protein_coding	Stard4	ENSMUST00000118990	protein_coding		18	-1	33213772	648
ENSMUSG00000028042	protein_coding	Zbtb7b	ENSMUST00000107432	protein_coding	principal1	3	-1	89392069	3639
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000140594	protein_coding	principal3	18	1	80256307	2356
ENSMUSG00000028453	protein_coding	Fancg	ENSMUST00000134083	processed_transcript		4	-1	43009153	767
ENSMUSG00000024378	protein_coding	Stard4	ENSMUST00000141617	retained_intron		18	-1	33213821	979
ENSMUSG00000097247	processed_transcript	1500012K07Rik	ENSMUST00000205989	lincRNA		7	1	75308696	611
ENSMUSG00000016458	protein_coding	Wt1	ENSMUST00000143043	protein_coding	principal5	2	1	105126529	3090
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000070135	protein_coding	alternative1	18	1	80256318	1911
ENSMUSG00000028042	protein_coding	Zbtb7b	ENSMUST00000029677	protein_coding	principal1	3	-1	89393362	3851
ENSMUSG00000028453	protein_coding	Fancg	ENSMUST00000135362	retained_intron		4	-1	43010170	476
ENSMUSG00000028453	protein_coding	Fancg	ENSMUST00000133915	retained_intron		4	-1	43010222	638
ENSMUSG00000097247	processed_transcript	1500012K07Rik	ENSMUST00000205592	lincRNA		7	1	75308702	759
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000155039	processed_transcript		18	1	80262840	380
ENSMUSG00000016458	protein_coding	Wt1	ENSMUST00000146842	protein_coding		2	1	105126996	1224
ENSMUSG00000097247	processed_transcript	1500012K07Rik	ENSMUST00000181846	antisense		7	1	75308702	2345
ENSMUSG00000028453	protein_coding	Fancg	ENSMUST00000132273	processed_transcript		4	-1	43010506	357
ENSMUSG00000108969	lincRNA	Gm45044	ENSMUST00000208078	lincRNA		8	-1	10891591	396
ENSMUSG00000016458	protein_coding	Wt1	ENSMUST00000133470	protein_coding		2	1	105127001	1220
ENSMUSG00000037254	protein_coding	Itih2	ENSMUST00000042290	protein_coding	principal1	2	-1	10130663	3100
ENSMUSG00000109291	lincRNA	Gm2814	ENSMUST00000207074	lincRNA		8	-1	10900558	1277
ENSMUSG00000095550	protein_coding	Gm21671	ENSMUST00000162387	protein_coding	principal1	5	-1	25954417	2421
ENSMUSG00000025075	protein_coding	Habp2	ENSMUST00000078284	protein_coding	alternative2	19	1	56287137	2314
ENSMUSG00000037254	protein_coding	Itih2	ENSMUST00000155809	protein_coding		2	-1	10131075	1507
ENSMUSG00000109089	processed_transcript	4833411C07Rik	ENSMUST00000207499	retained_intron		8	1	10899922	1331
ENSMUSG00000016458	protein_coding	Wt1	ENSMUST00000139585	protein_coding		2	1	105127210	1418
ENSMUSG00000083116	processed_pseudogene	Gm13410	ENSMUST00000117058	processed_pseudogene		2	1	24178834	1415
ENSMUSG00000034006	protein_coding	Slc66a2	ENSMUST00000091798	protein_coding	principal3	18	1	80256306	1989
ENSMUSG00000109089	processed_transcript	4833411C07Rik	ENSMUST00000207914	lincRNA		8	1	10899937	1568
ENSMUSG00000070382	protein_coding	Olfr391	ENSMUST00000214485	protein_coding	principal1	11	-1	73803052	2080
ENSMUSG00000085847	antisense	Gm14540	ENSMUST00000138298	antisense		6	1	33038468	3261
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000038027	protein_coding	principal1	7	-1	34230336	2884
ENSMUSG00000016458	protein_coding	Wt1	ENSMUST00000145107	retained_intron		2	1	105130800	2810
ENSMUSG00000016458	protein_coding	Wt1	ENSMUST00000111098	protein_coding	alternative1	2	1	105130883	2395
ENSMUSG00000016458	protein_coding	Wt1	ENSMUST00000111099	protein_coding	alternative1	2	1	105130883	2441
ENSMUSG00000108674	protein_coding	Olfr1359	ENSMUST00000214435	protein_coding	principal1	13	1	21698111	4425
ENSMUSG00000025075	protein_coding	Habp2	ENSMUST00000095948	protein_coding	principal2	19	1	56287922	2815
ENSMUSG00000108674	protein_coding	Olfr1359	ENSMUST00000214006	processed_transcript		13	1	21698212	3528
ENSMUSG00000108674	protein_coding	Olfr1359	ENSMUST00000077843	protein_coding	principal1	13	1	21702975	991
ENSMUSG00000020978	protein_coding	Klhdc2	ENSMUST00000021362	protein_coding	principal1	12	1	69296722	1905
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000116415	protein_coding	alternative2	8	-1	121108327	1520
ENSMUSG00000016458	protein_coding	Wt1	ENSMUST00000153944	retained_intron		2	1	105162808	941
ENSMUSG00000104651	processed_pseudogene	Gm21168	ENSMUST00000199646	processed_pseudogene		5	1	25956626	1096
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000112179	nonsense_mediated_decay		2	-1	71055583	2297
ENSMUSG00000114048	antisense	4930549C15Rik	ENSMUST00000221235	antisense		12	1	26346717	1260
ENSMUSG00000057069	protein_coding	Ero1lb	ENSMUST00000221560	protein_coding		13	1	12565874	1964
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000148876	nonsense_mediated_decay		2	-1	71055583	2473
ENSMUSG00000094338	protein_coding	H2bc13	ENSMUST00000091756	protein_coding	principal1	13	-1	21716143	381
ENSMUSG00000020547	protein_coding	Bzw2	ENSMUST00000020856	protein_coding	principal1	12	-1	36156825	1871
ENSMUSG00000028042	protein_coding	Zbtb7b	ENSMUST00000126027	protein_coding		3	-1	89393678	544
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000112186	protein_coding	principal2	2	-1	71055583	2347
ENSMUSG00000061984	protein_coding	Olfr392	ENSMUST00000118463	protein_coding	principal1	11	-1	73817049	3643
ENSMUSG00000029486	protein_coding	Mrpl1	ENSMUST00000117766	protein_coding	principal1	5	1	96209493	3556
ENSMUSG00000022537	protein_coding	Tmem44	ENSMUST00000140402	protein_coding	principal1	16	-1	30550578	2405
ENSMUSG00000020642	protein_coding	Rnf144a	ENSMUST00000223137	processed_transcript		12	-1	26310278	343
ENSMUSG00000025075	protein_coding	Habp2	ENSMUST00000165407	processed_transcript		19	1	56287936	821
ENSMUSG00000025075	protein_coding	Habp2	ENSMUST00000171341	nonsense_mediated_decay		19	1	56287996	976
ENSMUSG00000029199	protein_coding	Lias	ENSMUST00000031101	protein_coding		5	1	65391540	2996
ENSMUSG00000117730	processed_pseudogene	Gm5503	ENSMUST00000237135	processed_pseudogene		18	-1	33384955	558
ENSMUSG00000028042	protein_coding	Zbtb7b	ENSMUST00000142119	protein_coding		3	-1	89393342	403
ENSMUSG00000025075	protein_coding	Habp2	ENSMUST00000166049	protein_coding	alternative2	19	1	56287996	1650
ENSMUSG00000025075	protein_coding	Habp2	ENSMUST00000163502	protein_coding		19	1	56311814	661
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000121586	protein_coding		2	-1	71018374	1151
ENSMUSG00000083925	processed_pseudogene	Gm12012	ENSMUST00000118857	processed_pseudogene		11	1	16439254	1066
ENSMUSG00000061984	protein_coding	Olfr392	ENSMUST00000144724	protein_coding	principal1	11	-1	73817049	3904
ENSMUSG00000057069	protein_coding	Ero1lb	ENSMUST00000071973	protein_coding	principal1	13	1	12565883	4239
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000140293	protein_coding		2	-1	70973388	592
ENSMUSG00000022537	protein_coding	Tmem44	ENSMUST00000144001	nonsense_mediated_decay		16	-1	30550578	2505
ENSMUSG00000025075	protein_coding	Habp2	ENSMUST00000165522	nonsense_mediated_decay		19	1	56312948	715
ENSMUSG00000020978	protein_coding	Klhdc2	ENSMUST00000138585	retained_intron		12	1	69296755	2490
ENSMUSG00000029199	protein_coding	Lias	ENSMUST00000139847	retained_intron		5	1	65391544	1759
ENSMUSG00000020978	protein_coding	Klhdc2	ENSMUST00000154667	retained_intron		12	1	69302401	3316
ENSMUSG00000028042	protein_coding	Zbtb7b	ENSMUST00000148361	protein_coding		3	-1	89393378	481
ENSMUSG00000022537	protein_coding	Tmem44	ENSMUST00000149110	nonsense_mediated_decay		16	-1	30540909	1777
ENSMUSG00000106737	antisense	Gm42962	ENSMUST00000201966	antisense		6	-1	38984325	2325
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000149181	nonsense_mediated_decay		2	-1	70982184	743
ENSMUSG00000029486	protein_coding	Mrpl1	ENSMUST00000121477	protein_coding		5	1	96210144	1550
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000124781	retained_intron		2	-1	70976659	833
ENSMUSG00000057069	protein_coding	Ero1lb	ENSMUST00000220811	protein_coding		13	1	12565908	3341
ENSMUSG00000029199	protein_coding	Lias	ENSMUST00000126036	retained_intron		5	1	65391564	622
ENSMUSG00000028042	protein_coding	Zbtb7b	ENSMUST00000124783	protein_coding		3	-1	89393635	354
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000090849	protein_coding		2	-1	71055572	1842
ENSMUSG00000029199	protein_coding	Lias	ENSMUST00000200374	protein_coding		5	1	65391565	447
ENSMUSG00000028042	protein_coding	Zbtb7b	ENSMUST00000139094	processed_transcript		3	-1	89394776	697
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000124208	retained_intron		2	-1	71055583	1597
ENSMUSG00000029199	protein_coding	Lias	ENSMUST00000127519	retained_intron		5	1	65397542	419
ENSMUSG00000041975	protein_coding	Mettl8	ENSMUST00000124273	retained_intron		2	-1	71018378	390
ENSMUSG00000022537	protein_coding	Tmem44	ENSMUST00000125260	retained_intron		16	-1	30550539	3875
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000135243	retained_intron		7	-1	34210377	3195
ENSMUSG00000029486	protein_coding	Mrpl1	ENSMUST00000036437	protein_coding	principal1	5	1	96210115	3431
ENSMUSG00000057069	protein_coding	Ero1lb	ENSMUST00000221739	processed_transcript		13	1	12566458	1674
ENSMUSG00000022537	protein_coding	Tmem44	ENSMUST00000125559	retained_intron		16	-1	30550842	2729
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000205870	nonsense_mediated_decay		7	-1	34207898	933
ENSMUSG00000022537	protein_coding	Tmem44	ENSMUST00000232166	retained_intron		16	-1	30543497	479
ENSMUSG00000074466	antisense	Gm15417	ENSMUST00000145400	antisense		3	1	89391850	923
ENSMUSG00000029199	protein_coding	Lias	ENSMUST00000122026	protein_coding	principal1	5	1	65391497	1668
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000205865	nonsense_mediated_decay		7	-1	34213436	941
ENSMUSG00000022537	protein_coding	Tmem44	ENSMUST00000153380	processed_transcript		16	-1	30550528	726
ENSMUSG00000106291	TEC	1110003F10Rik	ENSMUST00000199441	TEC		5	1	65405751	767
ENSMUSG00000005397	protein_coding	Nid1	ENSMUST00000005532	protein_coding	principal1	13	1	13437551	6091
ENSMUSG00000074466	antisense	Gm15417	ENSMUST00000152143	antisense		3	1	89391970	599
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000205800	protein_coding		7	-1	34228997	581
ENSMUSG00000105896	TEC	Gm43311	ENSMUST00000200016	TEC		5	-1	65413027	2377
ENSMUSG00000020547	protein_coding	Bzw2	ENSMUST00000221521	retained_intron		12	-1	36156766	2533
ENSMUSG00000091809	protein_coding	Olfr721-ps1	ENSMUST00000215479	protein_coding	principal1	14	1	14401298	3075
ENSMUSG00000109549	unitary_pseudogene	Gm38941	ENSMUST00000208606	unitary_pseudogene		7	1	5054472	529
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000128052	nonsense_mediated_decay		8	-1	121108295	2415
ENSMUSG00000020547	protein_coding	Bzw2	ENSMUST00000222055	retained_intron		12	-1	36109770	706
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000205983	nonsense_mediated_decay		7	-1	34230257	617
ENSMUSG00000074466	antisense	Gm15417	ENSMUST00000126926	antisense		3	1	89394290	925
ENSMUSG00000074999	TEC	Gm10797	ENSMUST00000099661	TEC		10	1	67572042	2222
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000206232	retained_intron		7	-1	34206264	741
ENSMUSG00000020547	protein_coding	Bzw2	ENSMUST00000221388	protein_coding		12	-1	36156751	692
ENSMUSG00000038296	protein_coding	Galnt18	ENSMUST00000049430	protein_coding		7	-1	111779977	2575
ENSMUSG00000091809	protein_coding	Olfr721-ps1	ENSMUST00000206688	protein_coding	principal1	14	1	14407102	1097
ENSMUSG00000053768	protein_coding	Chchd3	ENSMUST00000129069	protein_coding		6	-1	32892330	477
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000206415	protein_coding		7	-1	34230242	485
ENSMUSG00000091809	protein_coding	Olfr721-ps1	ENSMUST00000165291	protein_coding		14	1	14407224	975
ENSMUSG00000074466	antisense	Gm15417	ENSMUST00000153969	antisense		3	1	89395996	275
ENSMUSG00000038296	protein_coding	Galnt18	ENSMUST00000106663	protein_coding	principal1	7	-1	111779977	2530
ENSMUSG00000055633	protein_coding	Zfp580	ENSMUST00000069324	protein_coding	principal2	7	1	5051538	1096
ENSMUSG00000005397	protein_coding	Nid1	ENSMUST00000222142	retained_intron		13	1	13437667	3803
ENSMUSG00000020547	protein_coding	Bzw2	ENSMUST00000223474	protein_coding		12	-1	36157092	738
ENSMUSG00000029925	protein_coding	Tbxas1	ENSMUST00000162521	protein_coding		6	1	38875404	1427
ENSMUSG00000020547	protein_coding	Bzw2	ENSMUST00000220828	protein_coding		12	-1	36156627	885
ENSMUSG00000049674	protein_coding	Olfr714	ENSMUST00000214123	processed_transcript		7	1	107071442	2992
ENSMUSG00000055633	protein_coding	Zfp580	ENSMUST00000208570	protein_coding	alternative2	7	1	5051989	693
ENSMUSG00000005397	protein_coding	Nid1	ENSMUST00000222436	retained_intron		13	1	13508712	646
ENSMUSG00000049674	protein_coding	Olfr714	ENSMUST00000214429	protein_coding	principal1	7	1	107070981	4324
ENSMUSG00000020547	protein_coding	Bzw2	ENSMUST00000222279	processed_transcript		12	-1	36156770	550
ENSMUSG00000051184	protein_coding	Zfp524	ENSMUST00000207901	protein_coding	principal1	7	1	5014415	1263
ENSMUSG00000024583	protein_coding	Txnl1	ENSMUST00000237004	protein_coding	principal2	18	-1	63692437	4343
ENSMUSG00000113380	antisense	Gm48682	ENSMUST00000220813	antisense		13	-1	13482405	1209
ENSMUSG00000049674	protein_coding	Olfr714	ENSMUST00000054629	protein_coding	principal1	7	1	107073830	954
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000046856	protein_coding	principal1	6	1	54039573	2418
ENSMUSG00000020547	protein_coding	Bzw2	ENSMUST00000222842	retained_intron		12	-1	36156721	1567
ENSMUSG00000100692	unprocessed_pseudogene	Gm21672	ENSMUST00000191609	unprocessed_pseudogene		Y	-1	70197533	696
ENSMUSG00000034247	protein_coding	Plekhm1	ENSMUST00000041272	protein_coding	principal1	11	-1	103412687	5968
ENSMUSG00000109391	processed_pseudogene	Gm45023	ENSMUST00000207951	processed_pseudogene		7	-1	107075639	379
ENSMUSG00000026166	protein_coding	Ccl20	ENSMUST00000027351	protein_coding		1	1	83116766	1417
ENSMUSG00000024583	protein_coding	Txnl1	ENSMUST00000025476	protein_coding	alternative1	18	-1	63692322	1998
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000133315	nonsense_mediated_decay		6	1	54039613	906
ENSMUSG00000096472	protein_coding	Cdkn2d	ENSMUST00000215619	protein_coding	principal1	9	-1	21291308	1423
ENSMUSG00000024583	protein_coding	Txnl1	ENSMUST00000238061	protein_coding		18	-1	63708794	1326
ENSMUSG00000024583	protein_coding	Txnl1	ENSMUST00000237331	protein_coding		18	-1	63708801	1433
ENSMUSG00000020547	protein_coding	Bzw2	ENSMUST00000223382	protein_coding		12	-1	36156786	729
ENSMUSG00000073897	protein_coding	Olfr17	ENSMUST00000210568	protein_coding	principal1	7	1	107093220	3666
ENSMUSG00000051184	protein_coding	Zfp524	ENSMUST00000086349	protein_coding	principal1	7	1	5015470	1142
ENSMUSG00000096472	protein_coding	Cdkn2d	ENSMUST00000086374	protein_coding		9	-1	21291153	1264
ENSMUSG00000091045	protein_coding	Vmn2r55	ENSMUST00000172743	protein_coding		7	-1	12685003	2358
ENSMUSG00000020547	protein_coding	Bzw2	ENSMUST00000220763	protein_coding		12	-1	36158080	371
ENSMUSG00000024583	protein_coding	Txnl1	ENSMUST00000235537	processed_transcript		18	-1	63666109	534
ENSMUSG00000028540	protein_coding	Dph2	ENSMUST00000030265	protein_coding	principal1	4	-1	117892032	2555
ENSMUSG00000024583	protein_coding	Txnl1	ENSMUST00000235749	processed_transcript		18	-1	63671675	550
ENSMUSG00000091045	protein_coding	Vmn2r55	ENSMUST00000233763	protein_coding	alternative2	7	-1	12685003	2334
ENSMUSG00000051184	protein_coding	Zfp524	ENSMUST00000209030	protein_coding	principal1	7	1	5015807	1128
ENSMUSG00000091045	protein_coding	Vmn2r55	ENSMUST00000232880	protein_coding	principal5	7	-1	12685003	2448
ENSMUSG00000024583	protein_coding	Txnl1	ENSMUST00000236892	protein_coding		18	-1	63675513	403
ENSMUSG00000073897	protein_coding	Olfr17	ENSMUST00000098138	protein_coding	principal1	7	1	107097467	948
ENSMUSG00000091045	protein_coding	Vmn2r55	ENSMUST00000167771	protein_coding		7	-1	12684991	1407
ENSMUSG00000024583	protein_coding	Txnl1	ENSMUST00000236253	processed_transcript		18	-1	63708514	705
ENSMUSG00000114257	processed_pseudogene	Gm47654	ENSMUST00000223720	processed_pseudogene		14	1	14429177	1069
ENSMUSG00000028540	protein_coding	Dph2	ENSMUST00000139332	retained_intron		4	-1	117892020	2558
ENSMUSG00000096472	protein_coding	Cdkn2d	ENSMUST00000213407	protein_coding		9	-1	21291407	691
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000206603	retained_intron		7	-1	34230263	1601
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000114403	processed_transcript		6	1	54040039	1274
ENSMUSG00000086604	antisense	Gm15510	ENSMUST00000123644	antisense		7	-1	5057116	1172
ENSMUSG00000038195	protein_coding	Rilp	ENSMUST00000042972	protein_coding	principal1	11	1	75510094	1489
ENSMUSG00000086604	antisense	Gm15510	ENSMUST00000145534	antisense		7	-1	5057026	350
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000127323	protein_coding		6	1	54040086	330
ENSMUSG00000035834	protein_coding	Polr3g	ENSMUST00000048993	protein_coding	principal1	13	-1	81711013	3054
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000102547	protein_coding		2	1	113327782	4967
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000150175	protein_coding		4	1	150236721	519
ENSMUSG00000034247	protein_coding	Plekhm1	ENSMUST00000184350	nonsense_mediated_decay		11	-1	103394768	2260
ENSMUSG00000028540	protein_coding	Dph2	ENSMUST00000183773	nonsense_mediated_decay		4	-1	117892023	2149
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000204410	processed_transcript		6	1	54097720	429
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000139782	protein_coding		8	-1	121108310	1366
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000126901	processed_transcript		7	-1	34229794	532
ENSMUSG00000028540	protein_coding	Dph2	ENSMUST00000126554	retained_intron		4	-1	117891986	627
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000146114	protein_coding		6	1	54264858	1227
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000140260	retained_intron		8	-1	121101593	673
ENSMUSG00000036427	protein_coding	Gpi1	ENSMUST00000138773	retained_intron		7	-1	34230289	419
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000161731	protein_coding	principal4	2	1	113363840	4262
ENSMUSG00000101725	protein_coding	Gm29423	ENSMUST00000189006	protein_coding	principal5	Y	-1	70303287	1138
ENSMUSG00000038195	protein_coding	Rilp	ENSMUST00000156923	retained_intron		11	1	75510467	1276
ENSMUSG00000105384	processed_pseudogene	Gm43396	ENSMUST00000197506	processed_pseudogene		5	-1	55584350	706
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000213028	retained_intron		8	-1	121101477	740
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000114402	protein_coding		6	1	54267131	802
ENSMUSG00000105551	processed_pseudogene	Gm43199	ENSMUST00000200019	processed_pseudogene		5	1	55584494	307
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000154834	processed_transcript		2	1	113400459	576
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000238883	protein_coding	alternative2	2	1	113405130	2644
ENSMUSG00000035834	protein_coding	Polr3g	ENSMUST00000162535	retained_intron		13	-1	81687285	2630
ENSMUSG00000043290	protein_coding	Zfp784	ENSMUST00000062428	protein_coding	principal1	7	-1	5038446	2153
ENSMUSG00000083902	processed_pseudogene	Gm15975	ENSMUST00000122385	processed_pseudogene		5	1	55624190	1402
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000133037	protein_coding		8	-1	121108392	1060
ENSMUSG00000026814	protein_coding	Eng	ENSMUST00000113272	protein_coding	alternative2	2	1	32646595	3021
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000081349	protein_coding	alternative2	2	1	113441064	4235
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000114401	protein_coding		6	1	54269156	1269
ENSMUSG00000105186	TEC	Gm43778	ENSMUST00000199438	TEC		5	1	55652949	199
ENSMUSG00000035834	protein_coding	Polr3g	ENSMUST00000161093	processed_transcript		13	-1	81710956	424
ENSMUSG00000109129	protein_coding	Gm44973	ENSMUST00000207050	protein_coding	principal1	7	1	5015496	1003
ENSMUSG00000106335	processed_pseudogene	Gm20223	ENSMUST00000199932	processed_pseudogene		5	-1	55723421	805
ENSMUSG00000029925	protein_coding	Tbxas1	ENSMUST00000003017	protein_coding	principal1	6	1	38918980	1990
ENSMUSG00000050608	protein_coding	Micos10	ENSMUST00000143971	protein_coding	principal1	4	-1	139131113	2549
ENSMUSG00000060227	protein_coding	Casc4	ENSMUST00000078752	protein_coding	principal4	2	1	121866970	4215
ENSMUSG00000035834	protein_coding	Polr3g	ENSMUST00000161920	protein_coding		13	-1	81710945	733
ENSMUSG00000035834	protein_coding	Polr3g	ENSMUST00000160331	retained_intron		13	-1	81711002	658
ENSMUSG00000060227	protein_coding	Casc4	ENSMUST00000127475	retained_intron		2	1	121867129	1814
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000067741	protein_coding		6	1	54272490	2983
ENSMUSG00000081698	processed_pseudogene	Gm12329	ENSMUST00000120829	processed_pseudogene		11	-1	73839541	1007
ENSMUSG00000094488	protein_coding	Olfr393	ENSMUST00000213365	protein_coding	principal1	11	-1	73851454	4048
ENSMUSG00000050608	protein_coding	Micos10	ENSMUST00000154642	processed_transcript		4	-1	139130994	476
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000150510	processed_transcript		2	1	113685090	385
ENSMUSG00000094488	protein_coding	Olfr393	ENSMUST00000102523	protein_coding	principal1	11	-1	73848123	939
ENSMUSG00000033417	protein_coding	Cacul1	ENSMUST00000081790	protein_coding	principal3	19	-1	60581025	5792
ENSMUSG00000050608	protein_coding	Micos10	ENSMUST00000123488	processed_transcript		4	-1	139111243	375
ENSMUSG00000108735	unprocessed_pseudogene	Gm44638	ENSMUST00000206645	unprocessed_pseudogene		11	-1	73869660	75
ENSMUSG00000050608	protein_coding	Micos10	ENSMUST00000063040	processed_transcript		4	-1	139105959	436
ENSMUSG00000114476	processed_pseudogene	Gm21063	ENSMUST00000225402	processed_pseudogene		14	1	14437740	969
ENSMUSG00000060227	protein_coding	Casc4	ENSMUST00000135416	retained_intron		2	1	121867130	928
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000204921	protein_coding		6	1	54272908	861
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000149718	retained_intron		8	-1	121108379	3347
ENSMUSG00000062987	protein_coding	Olfr715b	ENSMUST00000215713	protein_coding	principal1	7	-1	107110369	3879
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000203091	protein_coding		6	1	54272908	755
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000145891	processed_transcript		2	1	113685105	719
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000204115	protein_coding		6	1	54272908	783
ENSMUSG00000062987	protein_coding	Olfr715b	ENSMUST00000081044	protein_coding	principal1	7	-1	107106859	948
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000203941	protein_coding		6	1	54272908	687
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000198322	protein_coding	alternative1	3	-1	90052455	3385
ENSMUSG00000004633	protein_coding	Chn2	ENSMUST00000204746	protein_coding		6	1	54272908	825
ENSMUSG00000028520	protein_coding	4921539E11Rik	ENSMUST00000030245	protein_coding	principal1	4	-1	103290863	2448
ENSMUSG00000005232	protein_coding	G6pc2	ENSMUST00000129288	processed_transcript		2	1	69211073	537
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000152255	processed_transcript		2	1	113685105	2097
ENSMUSG00000114737	processed_pseudogene	Gm8483	ENSMUST00000224271	processed_pseudogene		14	-1	14448944	1284
ENSMUSG00000101725	protein_coding	Gm29423	ENSMUST00000190274	nonsense_mediated_decay		Y	-1	70303287	976
ENSMUSG00000026814	protein_coding	Eng	ENSMUST00000009705	protein_coding	principal3	2	1	32646595	3422
ENSMUSG00000026166	protein_coding	Ccl20	ENSMUST00000113437	protein_coding	principal3	1	1	83116774	794
ENSMUSG00000020642	protein_coding	Rnf144a	ENSMUST00000020971	protein_coding	principal1	12	-1	26415254	5164
ENSMUSG00000101725	protein_coding	Gm29423	ENSMUST00000185877	processed_transcript		Y	-1	70303199	302
ENSMUSG00000083238	processed_pseudogene	Hspe1-ps4	ENSMUST00000119538	processed_pseudogene		4	1	139150197	286
ENSMUSG00000028520	protein_coding	4921539E11Rik	ENSMUST00000097944	protein_coding		4	-1	103290863	1683
ENSMUSG00000033417	protein_coding	Cacul1	ENSMUST00000111460	protein_coding	alternative2	19	-1	60580955	2861
ENSMUSG00000026166	protein_coding	Ccl20	ENSMUST00000186832	protein_coding	alternative2	1	1	83116793	772
ENSMUSG00000101725	protein_coding	Gm29423	ENSMUST00000189304	nonsense_mediated_decay		Y	-1	70303205	655
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000134758	nonsense_mediated_decay		8	-1	121108288	1149
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000153151	processed_transcript		2	1	113708671	474
ENSMUSG00000087670	antisense	9530036M11Rik	ENSMUST00000138767	antisense		6	-1	54150937	1996
ENSMUSG00000021803	protein_coding	Cdhr1	ENSMUST00000022337	protein_coding	principal1	14	-1	37098347	4332
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000138908	processed_transcript		8	-1	121105632	557
ENSMUSG00000110209	lincRNA	Gm45868	ENSMUST00000210247	lincRNA		7	1	107113388	473
ENSMUSG00000045725	protein_coding	Prr15	ENSMUST00000204057	retained_intron		6	1	54325835	2074
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000126431	protein_coding		8	-1	121108298	913
ENSMUSG00000044042	protein_coding	Fmn1	ENSMUST00000099576	protein_coding	alternative2	2	1	113327736	11817
ENSMUSG00000029925	protein_coding	Tbxas1	ENSMUST00000159226	retained_intron		6	1	38919005	2481
ENSMUSG00000036188	protein_coding	Ankmy2	ENSMUST00000041640	protein_coding	principal1	12	1	36157114	2456
ENSMUSG00000020642	protein_coding	Rnf144a	ENSMUST00000062149	protein_coding	principal1	12	-1	26415216	4812
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000156606	retained_intron		8	-1	121107643	736
ENSMUSG00000028520	protein_coding	4921539E11Rik	ENSMUST00000168664	protein_coding		4	-1	103290863	2356
ENSMUSG00000060503	protein_coding	Olfr715	ENSMUST00000214919	protein_coding	principal1	7	-1	107131083	5114
ENSMUSG00000097689	lincRNA	4930471D02Rik	ENSMUST00000180815	lincRNA		10	1	93897158	2075
ENSMUSG00000085448	antisense	Gm13963	ENSMUST00000143525	antisense		2	-1	113441094	892
ENSMUSG00000101725	protein_coding	Gm29423	ENSMUST00000187904	nonsense_mediated_decay		Y	-1	70301237	327
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000145991	processed_transcript		8	-1	121105689	559
ENSMUSG00000110065	processed_pseudogene	Gm45588	ENSMUST00000211213	processed_pseudogene		7	-1	111858555	630
ENSMUSG00000029925	protein_coding	Tbxas1	ENSMUST00000161781	retained_intron		6	1	38919024	4562
ENSMUSG00000101725	protein_coding	Gm29423	ENSMUST00000189580	protein_coding	alternative2	Y	-1	70303230	255
ENSMUSG00000026814	protein_coding	Eng	ENSMUST00000167841	protein_coding	alternative2	2	1	32646622	3403
ENSMUSG00000045725	protein_coding	Prr15	ENSMUST00000059138	protein_coding	principal1	6	1	54326883	1511
ENSMUSG00000060503	protein_coding	Olfr715	ENSMUST00000076958	protein_coding	principal1	7	-1	107129482	1131
ENSMUSG00000114757	unitary_pseudogene	Gm48126	ENSMUST00000225546	unitary_pseudogene		10	1	93919090	522
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000151576	nonsense_mediated_decay		8	-1	121108313	488
ENSMUSG00000020642	protein_coding	Rnf144a	ENSMUST00000220742	processed_transcript		12	-1	26310386	558
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000080926	protein_coding	principal1	4	1	150236952	2027
ENSMUSG00000029925	protein_coding	Tbxas1	ENSMUST00000160963	protein_coding		6	1	38941401	403
ENSMUSG00000096001	protein_coding	2610528A11Rik	ENSMUST00000191317	processed_transcript		14	-1	37114022	705
ENSMUSG00000085532	lincRNA	B430319H21Rik	ENSMUST00000123420	lincRNA		11	1	63173914	734
ENSMUSG00000031816	protein_coding	Mthfsd	ENSMUST00000128503	processed_transcript		8	-1	121108343	358
ENSMUSG00000029925	protein_coding	Tbxas1	ENSMUST00000162656	processed_transcript		6	1	38971865	410
ENSMUSG00000020642	protein_coding	Rnf144a	ENSMUST00000222082	protein_coding		12	-1	26415131	764
ENSMUSG00000033417	protein_coding	Cacul1	ENSMUST00000166712	protein_coding	alternative2	19	-1	60580973	1305
ENSMUSG00000101725	protein_coding	Gm29423	ENSMUST00000188222	nonsense_mediated_decay		Y	-1	70303231	543
ENSMUSG00000060227	protein_coding	Casc4	ENSMUST00000089912	protein_coding		2	1	121867130	3602
ENSMUSG00000114676	processed_pseudogene	Gm47678	ENSMUST00000225279	processed_pseudogene		14	-1	14589216	3848
ENSMUSG00000029925	protein_coding	Tbxas1	ENSMUST00000161360	retained_intron		6	1	38983310	2901
ENSMUSG00000026814	protein_coding	Eng	ENSMUST00000139770	processed_transcript		2	1	32646993	258
ENSMUSG00000020642	protein_coding	Rnf144a	ENSMUST00000222505	retained_intron		12	-1	26414004	498
ENSMUSG00000036188	protein_coding	Ankmy2	ENSMUST00000220580	retained_intron		12	1	36157158	1522
ENSMUSG00000101725	protein_coding	Gm29423	ENSMUST00000185989	protein_coding		Y	-1	70301237	229
ENSMUSG00000026814	protein_coding	Eng	ENSMUST00000192455	retained_intron		2	1	32672843	611
ENSMUSG00000101849	lincRNA	Gm28386	ENSMUST00000189147	lincRNA		1	1	77515280	1849
ENSMUSG00000020642	protein_coding	Rnf144a	ENSMUST00000221994	retained_intron		12	-1	26406447	1757
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000130632	retained_intron		4	1	150237240	1878
ENSMUSG00000114574	processed_pseudogene	Gm47685	ENSMUST00000223638	processed_pseudogene		14	1	14589946	369
ENSMUSG00000094052	protein_coding	Gm21118	ENSMUST00000187418	protein_coding	principal1	Y	-1	70273642	1219
ENSMUSG00000026814	protein_coding	Eng	ENSMUST00000156306	protein_coding	alternative2	2	1	32673366	935
ENSMUSG00000033417	protein_coding	Cacul1	ENSMUST00000238073	retained_intron		19	-1	60537549	728
ENSMUSG00000096001	protein_coding	2610528A11Rik	ENSMUST00000179488	protein_coding	principal1	14	-1	37110101	754
ENSMUSG00000094052	protein_coding	Gm21118	ENSMUST00000180179	protein_coding	principal1	Y	-1	70272124	684
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000133839	protein_coding		4	1	150237240	773
ENSMUSG00000033417	protein_coding	Cacul1	ENSMUST00000237682	retained_intron		19	-1	60546022	654
ENSMUSG00000036188	protein_coding	Ankmy2	ENSMUST00000220788	retained_intron		12	1	36167326	4329
ENSMUSG00000060227	protein_coding	Casc4	ENSMUST00000089915	protein_coding		2	1	121867130	3475
ENSMUSG00000073739	antisense	Gm16287	ENSMUST00000097827	antisense		4	-1	139180655	2324
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000148605	retained_intron		4	1	150237243	562
ENSMUSG00000076485	TR_J_gene	Trbj1-3	ENSMUST00000192366	TR_J_gene	principal1	6	1	41534323	50
ENSMUSG00000114628	processed_pseudogene	Gm19018	ENSMUST00000226083	processed_pseudogene		14	1	14659108	772
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000141931	protein_coding		4	1	150237700	345
ENSMUSG00000101506	processed_pseudogene	Gm28385	ENSMUST00000185671	processed_pseudogene		1	1	77570672	292
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000080149	protein_coding		4	1	150243486	1902
ENSMUSG00000099530	protein_coding	Gm29644	ENSMUST00000189003	protein_coding	principal1	Y	-1	70303343	1341
ENSMUSG00000076485	TR_J_gene	Trbj1-3	ENSMUST00000103286	processed_transcript		6	1	41534323	54
ENSMUSG00000102052	lincRNA	Gm28387	ENSMUST00000189245	lincRNA		1	-1	77972376	854
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000135063	retained_intron		4	1	150244235	686
ENSMUSG00000030032	protein_coding	Wdr54	ENSMUST00000153148	protein_coding	principal1	6	-1	83156397	4634
ENSMUSG00000005232	protein_coding	G6pc2	ENSMUST00000005364	protein_coding	principal1	2	1	69219971	1892
ENSMUSG00000060227	protein_coding	Casc4	ENSMUST00000126256	processed_transcript		2	1	121867705	1282
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000029553	protein_coding		3	-1	90052465	3509
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000133789	retained_intron		4	1	150246397	478
ENSMUSG00000060227	protein_coding	Casc4	ENSMUST00000136023	protein_coding		2	1	121898807	918
ENSMUSG00000006611	protein_coding	Hfe	ENSMUST00000151243	protein_coding		13	-1	23705688	2458
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000151057	retained_intron		4	1	150247460	529
ENSMUSG00000076486	TR_J_gene	Trbj1-4	ENSMUST00000103287	TR_J_gene	principal1	6	1	41534811	51
ENSMUSG00000063524	protein_coding	Eno1	ENSMUST00000136310	retained_intron		4	1	150247565	578
ENSMUSG00000005232	protein_coding	G6pc2	ENSMUST00000112317	protein_coding		2	1	69219998	1749
ENSMUSG00000060227	protein_coding	Casc4	ENSMUST00000110586	protein_coding	alternative1	2	1	121866970	4032
ENSMUSG00000054003	protein_coding	Tdrd9	ENSMUST00000079009	protein_coding	principal1	12	1	111971559	4809
ENSMUSG00000005232	protein_coding	G6pc2	ENSMUST00000151953	processed_transcript		2	1	69220028	492
ENSMUSG00000090762	protein_coding	Vmn2r56	ENSMUST00000233304	protein_coding	alternative2	7	-1	12735004	7979
ENSMUSG00000073896	protein_coding	Olfr716	ENSMUST00000213367	protein_coding	principal1	7	1	107138327	3585
ENSMUSG00000090762	protein_coding	Vmn2r56	ENSMUST00000233373	protein_coding		7	-1	12735004	7942
ENSMUSG00000090762	protein_coding	Vmn2r56	ENSMUST00000233874	protein_coding		7	-1	12735004	7819
ENSMUSG00000094362	protein_coding	Defa33	ENSMUST00000120874	protein_coding	principal1	8	1	21391811	426
ENSMUSG00000073896	protein_coding	Olfr716	ENSMUST00000214819	protein_coding	principal1	7	1	107138327	3485
ENSMUSG00000090762	protein_coding	Vmn2r56	ENSMUST00000233902	protein_coding		7	-1	12735004	7856
ENSMUSG00000047626	protein_coding	Olfr791	ENSMUST00000217228	protein_coding	principal1	10	1	129521792	2502
ENSMUSG00000091902	unprocessed_pseudogene	Gm6918	ENSMUST00000167622	unprocessed_pseudogene		12	-1	103842339	1222
ENSMUSG00000073896	protein_coding	Olfr716	ENSMUST00000216871	protein_coding	principal1	7	1	107138327	4062
ENSMUSG00000029788	protein_coding	Cpa5	ENSMUST00000062758	protein_coding	principal1	6	1	30611010	2187
ENSMUSG00000073896	protein_coding	Olfr716	ENSMUST00000215284	protein_coding	principal1	7	1	107138327	3515
ENSMUSG00000047626	protein_coding	Olfr791	ENSMUST00000057477	protein_coding	principal1	10	1	129526229	939
ENSMUSG00000090762	protein_coding	Vmn2r56	ENSMUST00000163852	protein_coding	principal2	7	-1	12733105	2340
ENSMUSG00000030032	protein_coding	Wdr54	ENSMUST00000144723	retained_intron		6	-1	83156220	2284
ENSMUSG00000061374	protein_coding	Fiz1	ENSMUST00000167804	protein_coding	principal1	7	-1	5014253	2637
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000064639	protein_coding		3	-1	90052475	4073
ENSMUSG00000029788	protein_coding	Cpa5	ENSMUST00000115138	protein_coding		6	1	30611051	1778
ENSMUSG00000076487	TR_J_gene	Trbj1-5	ENSMUST00000103288	TR_J_gene	principal1	6	1	41535084	50
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000145482	protein_coding	principal2	15	1	99295271	3308
ENSMUSG00000061374	protein_coding	Fiz1	ENSMUST00000077385	protein_coding	principal1	7	-1	5014678	2546
ENSMUSG00000056921	protein_coding	Olfr394	ENSMUST00000216608	protein_coding	principal1	11	-1	73890771	5628
ENSMUSG00000073896	protein_coding	Olfr716	ENSMUST00000209942	protein_coding		7	1	107138330	585
ENSMUSG00000020096	protein_coding	Tbata	ENSMUST00000122261	protein_coding	alternative2	10	1	61171954	1431
ENSMUSG00000029788	protein_coding	Cpa5	ENSMUST00000115139	protein_coding	principal1	6	1	30612188	2070
ENSMUSG00000094496	protein_coding	Olfr792	ENSMUST00000215436	protein_coding	principal1	10	1	129539162	2113
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000196843	protein_coding		3	-1	90052462	3975
ENSMUSG00000073896	protein_coding	Olfr716	ENSMUST00000210474	protein_coding		7	1	107141314	637
ENSMUSG00000030032	protein_coding	Wdr54	ENSMUST00000154625	retained_intron		6	-1	83156365	1900
ENSMUSG00000056921	protein_coding	Olfr394	ENSMUST00000214284	protein_coding	principal1	11	-1	73890771	5562
ENSMUSG00000094496	protein_coding	Olfr792	ENSMUST00000076575	protein_coding	principal1	10	1	129540539	936
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000199050	protein_coding		3	-1	90003289	473
ENSMUSG00000056921	protein_coding	Olfr394	ENSMUST00000071478	protein_coding	principal1	11	-1	73888370	933
ENSMUSG00000109523	protein_coding	Gdf1	ENSMUST00000207684	protein_coding	principal1	8	1	70329817	1349
ENSMUSG00000030032	protein_coding	Wdr54	ENSMUST00000032108	processed_transcript		6	-1	83156265	962
ENSMUSG00000061374	protein_coding	Fiz1	ENSMUST00000165320	protein_coding	principal1	7	-1	5014697	2653
ENSMUSG00000029788	protein_coding	Cpa5	ENSMUST00000165949	nonsense_mediated_decay		6	1	30612555	1263
ENSMUSG00000073896	protein_coding	Olfr716	ENSMUST00000098137	protein_coding	principal1	7	1	107147226	1104
ENSMUSG00000096054	protein_coding	Syne1	ENSMUST00000215295	protein_coding	principal1	10	-1	5550678	27908
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000200301	retained_intron		3	-1	90003786	620
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000090908	protein_coding	alternative1	3	-1	90052452	3629
ENSMUSG00000094662	protein_coding	Defa36	ENSMUST00000095424	protein_coding	principal1	8	1	21427411	420
ENSMUSG00000030032	protein_coding	Wdr54	ENSMUST00000125894	protein_coding		6	-1	83156397	657
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000136980	protein_coding	alternative2	15	1	99295895	3047
ENSMUSG00000101014	antisense	Gm28289	ENSMUST00000189331	antisense		10	-1	14154446	315
ENSMUSG00000030032	protein_coding	Wdr54	ENSMUST00000146969	processed_transcript		6	-1	83156379	397
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000197177	protein_coding		3	-1	90021293	3503
ENSMUSG00000086040	protein_coding	Wipf3	ENSMUST00000132855	protein_coding	principal4	6	1	54429603	4516
ENSMUSG00000020096	protein_coding	Tbata	ENSMUST00000121297	protein_coding		10	1	61171964	1000
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000023745	protein_coding		15	1	99303283	2619
ENSMUSG00000086040	protein_coding	Wipf3	ENSMUST00000126637	protein_coding	alternative2	6	1	54429603	4414
ENSMUSG00000061374	protein_coding	Fiz1	ENSMUST00000208944	protein_coding	principal1	7	-1	5013238	2306
ENSMUSG00000076488	TR_J_gene	Trbj1-6	ENSMUST00000103289	TR_J_gene	principal1	6	1	41535554	53
ENSMUSG00000054003	protein_coding	Tdrd9	ENSMUST00000191808	nonsense_mediated_decay		12	1	111993758	3366
ENSMUSG00000063275	protein_coding	Hacd1	ENSMUST00000131730	nonsense_mediated_decay		2	-1	14056036	1876
ENSMUSG00000076489	TR_J_gene	Trbj1-7	ENSMUST00000193061	TR_J_gene	principal1	6	1	41535642	46
ENSMUSG00000086040	protein_coding	Wipf3	ENSMUST00000128480	processed_transcript		6	1	54472002	591
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000118287	protein_coding	alternative2	15	1	99303284	3129
ENSMUSG00000061374	protein_coding	Fiz1	ENSMUST00000207030	protein_coding	principal1	7	-1	5014269	2178
ENSMUSG00000096054	protein_coding	Syne1	ENSMUST00000095899	protein_coding		10	-1	5069063	3443
ENSMUSG00000086040	protein_coding	Wipf3	ENSMUST00000131043	retained_intron		6	1	54487906	2660
ENSMUSG00000076489	TR_J_gene	Trbj1-7	ENSMUST00000103290	processed_transcript		6	1	41535642	45
ENSMUSG00000061374	protein_coding	Fiz1	ENSMUST00000207691	retained_intron		7	-1	5014653	889
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000139330	retained_intron		15	1	99307885	906
ENSMUSG00000084344	unprocessed_pseudogene	Gm15305	ENSMUST00000120354	unprocessed_pseudogene		8	1	21438675	288
ENSMUSG00000096054	protein_coding	Syne1	ENSMUST00000217064	retained_intron		10	-1	5068913	3938
ENSMUSG00000061374	protein_coding	Fiz1	ENSMUST00000207946	protein_coding		7	-1	5013497	368
ENSMUSG00000096054	protein_coding	Syne1	ENSMUST00000215467	protein_coding		10	-1	5194707	3894
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000153692	retained_intron		15	1	99309903	818
ENSMUSG00000061374	protein_coding	Fiz1	ENSMUST00000209060	protein_coding		7	-1	5013644	741
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000124275	retained_intron		15	1	99314868	590
ENSMUSG00000096054	protein_coding	Syne1	ENSMUST00000215021	retained_intron		10	-1	5142528	2785
ENSMUSG00000026368	protein_coding	F13b	ENSMUST00000027615	protein_coding	principal1	1	1	139501702	2379
ENSMUSG00000061374	protein_coding	Fiz1	ENSMUST00000207412	protein_coding		7	-1	5014673	361
ENSMUSG00000096054	protein_coding	Syne1	ENSMUST00000217592	retained_intron		10	-1	5185526	3315
ENSMUSG00000086040	protein_coding	Wipf3	ENSMUST00000163746	protein_coding	alternative2	6	1	54452883	4102
ENSMUSG00000086040	protein_coding	Wipf3	ENSMUST00000172046	protein_coding	principal4	6	1	54452883	4204
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000195995	protein_coding	principal3	3	-1	90052472	3516
ENSMUSG00000026368	protein_coding	F13b	ENSMUST00000141842	processed_transcript		1	1	139516394	430
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000134034	protein_coding		15	1	99314877	891
ENSMUSG00000096054	protein_coding	Syne1	ENSMUST00000041639	protein_coding		10	-1	5550692	6990
ENSMUSG00000080205	processed_pseudogene	Gm15526	ENSMUST00000112504	processed_pseudogene		6	-1	54177683	204
ENSMUSG00000006611	protein_coding	Hfe	ENSMUST00000091706	protein_coding	principal1	13	-1	23710854	3572
ENSMUSG00000044103	protein_coding	Il1f9	ENSMUST00000057567	protein_coding	principal1	2	1	24186476	1648
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000199834	protein_coding	principal3	3	-1	90052515	3494
ENSMUSG00000054003	protein_coding	Tdrd9	ENSMUST00000192125	nonsense_mediated_decay		12	1	111993758	3681
ENSMUSG00000020096	protein_coding	Tbata	ENSMUST00000035894	protein_coding	principal3	10	1	61171986	1506
ENSMUSG00000019124	protein_coding	Scrn1	ENSMUST00000205108	protein_coding		6	-1	54509361	401
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000196747	retained_intron		3	-1	90016293	2099
ENSMUSG00000074405	protein_coding	Zfp865	ENSMUST00000076251	protein_coding	principal1	7	1	5020376	7503
ENSMUSG00000054003	protein_coding	Tdrd9	ENSMUST00000194800	retained_intron		12	1	112013066	799
ENSMUSG00000006611	protein_coding	Hfe	ENSMUST00000091707	protein_coding		13	-1	23710714	816
ENSMUSG00000054003	protein_coding	Tdrd9	ENSMUST00000193586	processed_transcript		12	1	112026103	456
ENSMUSG00000006611	protein_coding	Hfe	ENSMUST00000006787	protein_coding		13	-1	23710714	516
ENSMUSG00000022604	protein_coding	Cep97	ENSMUST00000023270	protein_coding	principal1	16	-1	55934855	7911
ENSMUSG00000054003	protein_coding	Tdrd9	ENSMUST00000193630	retained_intron		12	1	112063154	484
ENSMUSG00000020096	protein_coding	Tbata	ENSMUST00000131879	nonsense_mediated_decay		10	1	61174370	666
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000150636	protein_coding		15	1	99314906	892
ENSMUSG00000074405	protein_coding	Zfp865	ENSMUST00000085427	protein_coding		7	1	5020570	2751
ENSMUSG00000053768	protein_coding	Chchd3	ENSMUST00000066379	protein_coding	principal1	6	-1	33060260	1550
ENSMUSG00000106627	protein_coding	Gm21680	ENSMUST00000200447	protein_coding	principal1	5	-1	25972663	2975
ENSMUSG00000023007	protein_coding	Prpf40b	ENSMUST00000126955	protein_coding		15	1	99315540	780
ENSMUSG00000074405	protein_coding	Zfp865	ENSMUST00000207845	processed_transcript		7	1	5020576	1872
ENSMUSG00000074405	protein_coding	Zfp865	ENSMUST00000207362	processed_transcript		7	1	5020587	93
ENSMUSG00000096054	protein_coding	Syne1	ENSMUST00000215887	retained_intron		10	-1	5368486	5412
ENSMUSG00000074405	protein_coding	Zfp865	ENSMUST00000207193	retained_intron		7	1	5029324	3815
ENSMUSG00000078173	protein_coding	Lenep	ENSMUST00000057431	protein_coding	principal1	3	-1	89402793	1806
ENSMUSG00000096054	protein_coding	Syne1	ENSMUST00000214945	protein_coding		10	-1	5551482	2726
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000199612	retained_intron		3	-1	90020590	2789
ENSMUSG00000071516	protein_coding	H2ac13	ENSMUST00000070124	protein_coding	principal1	13	1	21716422	393
ENSMUSG00000035228	protein_coding	Ccdc106	ENSMUST00000208728	protein_coding		7	1	5020553	312
ENSMUSG00000099566	unprocessed_pseudogene	Gm28099	ENSMUST00000186511	unprocessed_pseudogene		Y	-1	8764931	699
ENSMUSG00000083555	processed_pseudogene	Gm12035	ENSMUST00000121890	processed_pseudogene		11	-1	20575189	623
ENSMUSG00000022604	protein_coding	Cep97	ENSMUST00000118500	protein_coding		16	-1	55934480	3389
ENSMUSG00000049800	protein_coding	Sertad2	ENSMUST00000145328	processed_transcript		11	1	20543253	639
ENSMUSG00000022604	protein_coding	Cep97	ENSMUST00000117468	protein_coding		16	-1	55934233	2887
ENSMUSG00000063275	protein_coding	Hacd1	ENSMUST00000114753	protein_coding	principal1	2	-1	14056020	993
ENSMUSG00000028078	protein_coding	Dclk2	ENSMUST00000191752	protein_coding	alternative2	3	-1	86920379	8042
ENSMUSG00000087408	protein_coding	Cers1	ENSMUST00000140239	protein_coding	alternative2	8	1	70315787	2711
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000021368	protein_coding	principal1	12	-1	69357165	4732
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000107024	protein_coding	alternative2	11	-1	103360900	3976
ENSMUSG00000078907	protein_coding	Fam186b	ENSMUST00000109100	protein_coding	principal1	15	-1	99287180	3187
ENSMUSG00000028078	protein_coding	Dclk2	ENSMUST00000192773	nonsense_mediated_decay		3	-1	86920188	4908
ENSMUSG00000063275	protein_coding	Hacd1	ENSMUST00000091429	protein_coding		2	-1	14056020	871
ENSMUSG00000096045	protein_coding	Gm21698	ENSMUST00000191203	protein_coding	principal1	5	-1	25988650	2995
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000196568	retained_intron		3	-1	90052331	2681
ENSMUSG00000019124	protein_coding	Scrn1	ENSMUST00000019268	protein_coding	principal1	6	-1	54566489	4810
ENSMUSG00000096045	protein_coding	Gm21698	ENSMUST00000178487	protein_coding		5	-1	25987448	666
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000197633	retained_intron		3	-1	90017629	1490
ENSMUSG00000089704	protein_coding	Galnt2	ENSMUST00000034458	protein_coding	principal1	8	1	124231391	4113
ENSMUSG00000016626	protein_coding	Nlrp14	ENSMUST00000084763	protein_coding	principal1	7	1	107166990	3272
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000200195	retained_intron		3	-1	90018497	479
ENSMUSG00000105096	protein_coding	Gbp10	ENSMUST00000065588	protein_coding	principal1	5	-1	105239533	3528
ENSMUSG00000053768	protein_coding	Chchd3	ENSMUST00000124436	nonsense_mediated_decay		6	-1	33060236	1467
ENSMUSG00000019124	protein_coding	Scrn1	ENSMUST00000203800	protein_coding		6	-1	54520853	553
ENSMUSG00000036928	protein_coding	Stag3	ENSMUST00000160729	protein_coding		5	1	138280240	989
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000199301	retained_intron		3	-1	90027438	2318
ENSMUSG00000078907	protein_coding	Fam186b	ENSMUST00000230608	protein_coding		15	-1	99295888	683
ENSMUSG00000016626	protein_coding	Nlrp14	ENSMUST00000142623	protein_coding		7	1	107187128	1437
ENSMUSG00000019124	protein_coding	Scrn1	ENSMUST00000124325	retained_intron		6	-1	54514817	3024
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000196952	retained_intron		3	-1	90023430	1398
ENSMUSG00000022604	protein_coding	Cep97	ENSMUST00000122280	protein_coding		16	-1	55934797	1057
ENSMUSG00000053768	protein_coding	Chchd3	ENSMUST00000143206	processed_transcript		6	-1	32897071	661
ENSMUSG00000101355	protein_coding	H3c10	ENSMUST00000188775	protein_coding	principal1	13	1	21717659	411
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000199016	retained_intron		3	-1	90038856	2396
ENSMUSG00000019124	protein_coding	Scrn1	ENSMUST00000129744	protein_coding		6	-1	54554455	567
ENSMUSG00000105096	protein_coding	Gbp10	ENSMUST00000196634	retained_intron		5	-1	105221976	703
ENSMUSG00000053768	protein_coding	Chchd3	ENSMUST00000133375	processed_transcript		6	-1	32897028	720
ENSMUSG00000049800	protein_coding	Sertad2	ENSMUST00000093292	protein_coding	principal1	11	1	20543334	5647
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000196633	protein_coding		3	-1	90052082	410
ENSMUSG00000089704	protein_coding	Galnt2	ENSMUST00000142578	processed_transcript		8	1	124231508	530
ENSMUSG00000019124	protein_coding	Scrn1	ENSMUST00000140235	processed_transcript		6	-1	54554446	964
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000198282	retained_intron		3	-1	90052502	2271
ENSMUSG00000053768	protein_coding	Chchd3	ENSMUST00000125264	processed_transcript		6	-1	32897021	675
ENSMUSG00000087408	protein_coding	Cers1	ENSMUST00000136257	retained_intron		8	1	70318350	787
ENSMUSG00000089704	protein_coding	Galnt2	ENSMUST00000142547	processed_transcript		8	1	124295103	473
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000197903	protein_coding		3	-1	90052628	328
ENSMUSG00000053768	protein_coding	Chchd3	ENSMUST00000129654	processed_transcript		6	-1	32803992	470
ENSMUSG00000089704	protein_coding	Galnt2	ENSMUST00000147911	processed_transcript		8	1	124295366	511
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000199929	protein_coding		3	-1	90052438	623
ENSMUSG00000063275	protein_coding	Hacd1	ENSMUST00000074854	protein_coding	principal1	2	-1	14056135	926
ENSMUSG00000053768	protein_coding	Chchd3	ENSMUST00000140446	processed_transcript		6	-1	32819692	494
ENSMUSG00000053768	protein_coding	Chchd3	ENSMUST00000127666	protein_coding		6	-1	33060237	734
ENSMUSG00000049800	protein_coding	Sertad2	ENSMUST00000109586	protein_coding	principal1	11	1	20631979	5515
ENSMUSG00000042520	protein_coding	Ubap2l	ENSMUST00000196917	protein_coding		3	-1	90048299	592
ENSMUSG00000009566	protein_coding	Fpgs	ENSMUST00000028148	protein_coding	principal1	2	-1	32694185	2273
ENSMUSG00000094948	unprocessed_pseudogene	Gm21286	ENSMUST00000098035	unprocessed_pseudogene		4	1	60836908	545
ENSMUSG00000103926	TEC	Gm37894	ENSMUST00000195416	TEC		2	-1	14040423	2599
ENSMUSG00000102553	TEC	D930036K23Rik	ENSMUST00000191894	TEC		2	-1	14020049	3964
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000221794	retained_intron		12	-1	69323652	2843
ENSMUSG00000096652	unprocessed_pseudogene	Mup-ps9	ENSMUST00000178847	unprocessed_pseudogene		4	1	61163063	545
ENSMUSG00000110111	processed_pseudogene	Gm7786	ENSMUST00000210494	processed_pseudogene		7	1	10975368	436
ENSMUSG00000053768	protein_coding	Chchd3	ENSMUST00000115091	protein_coding		6	-1	33060217	1363
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000221193	retained_intron		12	-1	69315926	3909
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000194641	protein_coding	principal3	3	-1	51340663	5919
ENSMUSG00000106676	TEC	Gm42895	ENSMUST00000200761	TEC		6	-1	33042119	2996
ENSMUSG00000100607	lincRNA	Gm29379	ENSMUST00000186305	lincRNA		Y	-1	66523034	2166
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000221112	retained_intron		12	-1	69314632	497
ENSMUSG00000049800	protein_coding	Sertad2	ENSMUST00000109585	protein_coding	principal1	11	1	20647155	1462
ENSMUSG00000022604	protein_coding	Cep97	ENSMUST00000121129	protein_coding		16	-1	55934854	989
ENSMUSG00000084259	processed_pseudogene	Gm12040	ENSMUST00000118357	processed_pseudogene		11	-1	21206946	537
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000221278	retained_intron		12	-1	69314876	660
ENSMUSG00000079362	protein_coding	Gm43302	ENSMUST00000050011	protein_coding	principal1	5	-1	105293695	4310
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000116102	retained_intron		11	-1	103363692	4835
ENSMUSG00000104648	processed_pseudogene	Gm42570	ENSMUST00000195937	processed_pseudogene		5	1	29691422	292
ENSMUSG00000082898	processed_pseudogene	Gm12041	ENSMUST00000121606	processed_pseudogene		11	1	21227655	602
ENSMUSG00000015501	protein_coding	Hivep2	ENSMUST00000187083	protein_coding	principal1	10	1	13966075	9268
ENSMUSG00000001027	protein_coding	Scn4a	ENSMUST00000021056	protein_coding	principal1	11	-1	106349389	6598
ENSMUSG00000105032	processed_pseudogene	Gm43117	ENSMUST00000198531	processed_pseudogene		5	-1	29719706	379
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000041385	protein_coding	principal3	11	-1	103344702	3512
ENSMUSG00000035228	protein_coding	Ccdc106	ENSMUST00000108571	protein_coding		7	1	5056152	1318
ENSMUSG00000001027	protein_coding	Scn4a	ENSMUST00000174877	processed_transcript		11	-1	106353288	443
ENSMUSG00000026984	protein_coding	Il1f6	ENSMUST00000028361	protein_coding	principal1	2	1	24215418	883
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000150122	retained_intron		11	-1	103334110	857
ENSMUSG00000009566	protein_coding	Fpgs	ENSMUST00000130164	retained_intron		2	-1	32694135	2404
ENSMUSG00000022604	protein_coding	Cep97	ENSMUST00000121703	protein_coding		16	-1	55934833	609
ENSMUSG00000089873	protein_coding	Mup13	ENSMUST00000072678	protein_coding	principal2	4	-1	61228271	925
ENSMUSG00000035228	protein_coding	Ccdc106	ENSMUST00000208042	protein_coding		7	1	5056725	601
ENSMUSG00000015501	protein_coding	Hivep2	ENSMUST00000015645	protein_coding	principal1	10	1	13966379	9763
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000163250	processed_transcript		11	-1	103333395	114
ENSMUSG00000107615	unprocessed_pseudogene	Olfr793-ps1	ENSMUST00000205161	unprocessed_pseudogene		10	1	129547660	895
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000183463	nonsense_mediated_decay		3	-1	51326029	3249
ENSMUSG00000038917	lincRNA	3930402G23Rik	ENSMUST00000040608	lincRNA		8	-1	10928696	3086
ENSMUSG00000066637	protein_coding	Ttc32	ENSMUST00000085741	protein_coding	principal1	12	1	9029997	1000
ENSMUSG00000032268	protein_coding	Tmprss5	ENSMUST00000165088	protein_coding	alternative2	9	1	49081260	2895
ENSMUSG00000009566	protein_coding	Fpgs	ENSMUST00000132327	retained_intron		2	-1	32685956	861
ENSMUSG00000050100	protein_coding	Hmx2	ENSMUST00000183219	protein_coding	principal1	7	1	131548773	1546
ENSMUSG00000035228	protein_coding	Ccdc106	ENSMUST00000207974	protein_coding		7	1	5056740	2492
ENSMUSG00000021400	protein_coding	Wrnip1	ENSMUST00000021832	protein_coding	principal1	13	1	32802038	2633
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000144194	retained_intron		11	-1	103334089	434
ENSMUSG00000044317	protein_coding	Gpr4	ENSMUST00000060225	protein_coding	principal1	7	1	19212538	2882
ENSMUSG00000009566	protein_coding	Fpgs	ENSMUST00000142186	processed_transcript		2	-1	32685004	331
ENSMUSG00000015501	protein_coding	Hivep2	ENSMUST00000191138	protein_coding	principal1	10	1	13966379	9846
ENSMUSG00000089873	protein_coding	Mup13	ENSMUST00000098042	protein_coding	alternative2	4	-1	61228286	984
ENSMUSG00000035228	protein_coding	Ccdc106	ENSMUST00000208161	protein_coding		7	1	5056856	472
ENSMUSG00000038917	lincRNA	3930402G23Rik	ENSMUST00000208615	lincRNA		8	-1	10928444	581
ENSMUSG00000104713	protein_coding	Gbp6	ENSMUST00000200045	nonsense_mediated_decay		5	-1	105293684	4173
ENSMUSG00000026984	protein_coding	Il1f6	ENSMUST00000144442	processed_transcript		2	1	24215505	479
ENSMUSG00000032268	protein_coding	Tmprss5	ENSMUST00000171217	retained_intron		9	1	49102728	398
ENSMUSG00000066637	protein_coding	Ttc32	ENSMUST00000219488	protein_coding		12	1	9030027	768
ENSMUSG00000009566	protein_coding	Fpgs	ENSMUST00000123171	retained_intron		2	-1	32687502	648
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000080210	protein_coding	principal4	2	1	102658659	11595
ENSMUSG00000066637	protein_coding	Ttc32	ENSMUST00000219470	protein_coding		12	1	9030028	1645
ENSMUSG00000015501	protein_coding	Hivep2	ENSMUST00000186989	protein_coding		10	1	13966646	1762
ENSMUSG00000082173	unprocessed_pseudogene	Mup-ps10	ENSMUST00000119626	unprocessed_pseudogene		4	1	61243577	556
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000139830	retained_intron		11	-1	103339719	726
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000221722	processed_transcript		12	-1	69341603	2385
ENSMUSG00000021400	protein_coding	Wrnip1	ENSMUST00000220560	retained_intron		13	1	32802116	3982
ENSMUSG00000035228	protein_coding	Ccdc106	ENSMUST00000207215	protein_coding		7	1	5056916	398
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000124490	retained_intron		11	-1	103339303	673
ENSMUSG00000021400	protein_coding	Wrnip1	ENSMUST00000229351	nonsense_mediated_decay		13	1	32806950	328
ENSMUSG00000087408	protein_coding	Cers1	ENSMUST00000165819	protein_coding	principal4	8	1	70315775	2728
ENSMUSG00000091049	protein_coding	Gm1979	ENSMUST00000168875	protein_coding	principal1	5	-1	26004798	2025
ENSMUSG00000101278	lincRNA	Gm29381	ENSMUST00000190168	lincRNA		Y	1	66555040	1497
ENSMUSG00000050100	protein_coding	Hmx2	ENSMUST00000051997	protein_coding	principal1	7	1	131554061	3102
ENSMUSG00000009566	protein_coding	Fpgs	ENSMUST00000146498	nonsense_mediated_decay		2	-1	32704137	795
ENSMUSG00000015501	protein_coding	Hivep2	ENSMUST00000185392	retained_intron		10	1	13966961	758
ENSMUSG00000026042	protein_coding	Col5a2	ENSMUST00000086430	protein_coding	principal1	1	-1	45503282	6625
ENSMUSG00000021400	protein_coding	Wrnip1	ENSMUST00000221066	processed_transcript		13	1	32807146	518
ENSMUSG00000091049	protein_coding	Gm1979	ENSMUST00000170224	protein_coding		5	-1	26003597	666
ENSMUSG00000038691	protein_coding	Mbd3l1	ENSMUST00000213625	protein_coding	principal1	9	1	18478359	823
ENSMUSG00000101278	lincRNA	Gm29381	ENSMUST00000190475	lincRNA		Y	1	66555492	437
ENSMUSG00000015501	protein_coding	Hivep2	ENSMUST00000191464	processed_transcript		10	1	13967024	2899
ENSMUSG00000009566	protein_coding	Fpgs	ENSMUST00000156792	retained_intron		2	-1	32687837	728
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000136491	protein_coding		11	-1	103356361	748
ENSMUSG00000021400	protein_coding	Wrnip1	ENSMUST00000230949	retained_intron		13	1	32820766	660
ENSMUSG00000104173	TEC	Gm37703	ENSMUST00000192292	TEC		2	1	24231868	1784
ENSMUSG00000114068	TEC	Gm48783	ENSMUST00000221249	TEC		13	1	13514738	1080
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000062009	protein_coding	alternative2	3	-1	51340644	3353
ENSMUSG00000099829	lincRNA	Gm29380	ENSMUST00000185898	lincRNA		Y	-1	66558067	416
ENSMUSG00000035228	protein_coding	Ccdc106	ENSMUST00000045543	protein_coding	principal1	7	1	5057197	1534
ENSMUSG00000009566	protein_coding	Fpgs	ENSMUST00000127812	protein_coding		2	-1	32704145	800
ENSMUSG00000024885	protein_coding	Aldh3b1	ENSMUST00000051803	protein_coding	principal1	19	-1	3929808	1924
ENSMUSG00000042874	antisense	D930007J09Rik	ENSMUST00000238724	antisense		13	-1	32803091	2459
ENSMUSG00000020096	protein_coding	Tbata	ENSMUST00000143207	protein_coding		10	1	61175262	982
ENSMUSG00000042874	antisense	D930007J09Rik	ENSMUST00000057911	antisense		13	-1	32802849	393
ENSMUSG00000098135	processed_pseudogene	Gm6946	ENSMUST00000182237	processed_pseudogene		7	1	12742686	987
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000107023	protein_coding		11	-1	103356375	379
ENSMUSG00000009566	protein_coding	Fpgs	ENSMUST00000149491	retained_intron		2	-1	32693244	706
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000091144	protein_coding		3	-1	51277415	2366
ENSMUSG00000028078	protein_coding	Dclk2	ENSMUST00000029719	protein_coding	principal3	3	-1	86920852	4012
ENSMUSG00000032268	protein_coding	Tmprss5	ENSMUST00000166272	nonsense_mediated_decay		9	1	49102728	2045
ENSMUSG00000009566	protein_coding	Fpgs	ENSMUST00000143743	protein_coding		2	-1	32704031	216
ENSMUSG00000026042	protein_coding	Col5a2	ENSMUST00000150143	retained_intron		1	-1	45393634	2951
ENSMUSG00000109274	TEC	Gm45133	ENSMUST00000207548	TEC		7	-1	5062049	2773
ENSMUSG00000038691	protein_coding	Mbd3l1	ENSMUST00000069218	protein_coding	principal1	9	1	18478379	850
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000111212	protein_coding	alternative1	2	1	102706438	1957
ENSMUSG00000062380	protein_coding	Tubb3	ENSMUST00000071134	protein_coding	principal1	8	1	123411424	1868
ENSMUSG00000024885	protein_coding	Aldh3b1	ENSMUST00000237391	processed_transcript		19	-1	3929727	717
ENSMUSG00000028078	protein_coding	Dclk2	ENSMUST00000195561	protein_coding	alternative2	3	-1	86920335	3486
ENSMUSG00000051056	protein_coding	Gja10	ENSMUST00000219644	protein_coding	alternative2	4	-1	32602760	1857
ENSMUSG00000083786	processed_pseudogene	Rps18-ps2	ENSMUST00000119493	processed_pseudogene		4	1	8941259	398
ENSMUSG00000114279	protein_coding	H2bc14	ENSMUST00000224651	protein_coding	principal1	13	1	21722044	524
ENSMUSG00000076490	TR_C_gene	Trbc1	ENSMUST00000192856	TR_C_gene		6	1	41538218	737
ENSMUSG00000051056	protein_coding	Gja10	ENSMUST00000056517	protein_coding	principal2	4	-1	32602760	2117
ENSMUSG00000038691	protein_coding	Mbd3l1	ENSMUST00000215255	protein_coding	principal1	9	1	18478403	708
ENSMUSG00000042642	protein_coding	Flad1	ENSMUST00000050398	protein_coding		3	-1	89411870	3007
ENSMUSG00000028078	protein_coding	Dclk2	ENSMUST00000193632	protein_coding	alternative2	3	-1	86920170	2336
ENSMUSG00000062380	protein_coding	Tubb3	ENSMUST00000212743	protein_coding		8	1	123411590	776
ENSMUSG00000110186	transcribed_unprocessed_pseudogene	Gm7789	ENSMUST00000210473	processed_transcript		7	-1	10995992	701
ENSMUSG00000076490	TR_C_gene	Trbc1	ENSMUST00000103291	TR_C_gene	principal1	6	1	41538218	512
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000220674	retained_intron		12	-1	69357142	2370
ENSMUSG00000099426	lincRNA	Gm28761	ENSMUST00000186540	lincRNA		Y	-1	32756950	622
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000108051	protein_coding		3	-1	51277514	2514
ENSMUSG00000099426	lincRNA	Gm28761	ENSMUST00000187767	lincRNA		Y	-1	32756950	437
ENSMUSG00000080076	unprocessed_pseudogene	H2ac14	ENSMUST00000091710	unprocessed_pseudogene		13	-1	21721808	352
ENSMUSG00000032268	protein_coding	Tmprss5	ENSMUST00000070390	protein_coding	principal2	9	1	49102779	2047
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000222763	processed_transcript		12	-1	69357138	1340
ENSMUSG00000034255	protein_coding	Arhgap27	ENSMUST00000092557	protein_coding		11	-1	103363464	1504
ENSMUSG00000028078	protein_coding	Dclk2	ENSMUST00000192260	processed_transcript		3	-1	86792315	715
ENSMUSG00000110186	transcribed_unprocessed_pseudogene	Gm7789	ENSMUST00000211273	transcribed_unprocessed_pseudogene		7	-1	10996362	1400
ENSMUSG00000026042	protein_coding	Col5a2	ENSMUST00000134681	retained_intron		1	-1	45503282	1970
ENSMUSG00000085030	lincRNA	2810455O05Rik	ENSMUST00000138442	lincRNA		8	-1	123840785	1691
ENSMUSG00000034930	protein_coding	Rtkn	ENSMUST00000135490	protein_coding		6	1	83135463	862
ENSMUSG00000094569	TR_D_gene	Trbd2	ENSMUST00000178862	TR_D_gene	principal1	6	1	41542163	14
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000222674	retained_intron		12	-1	69341822	534
ENSMUSG00000090671	processed_pseudogene	Gm5067	ENSMUST00000170449	processed_pseudogene		5	1	26007027	1009
ENSMUSG00000026042	protein_coding	Col5a2	ENSMUST00000131535	retained_intron		1	-1	45422411	356
ENSMUSG00000021028	protein_coding	Mbip	ENSMUST00000021416	protein_coding	principal1	12	-1	56345894	1512
ENSMUSG00000101053	protein_coding	Gm20815	ENSMUST00000115496	protein_coding	principal1	Y	-1	8835169	1224
ENSMUSG00000032268	protein_coding	Tmprss5	ENSMUST00000167095	protein_coding	alternative2	9	1	49102821	1146
ENSMUSG00000042642	protein_coding	Flad1	ENSMUST00000129308	protein_coding	principal1	3	-1	89411863	2892
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000005220	protein_coding		2	1	102706438	2127
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000108053	protein_coding		3	-1	51277575	2611
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000220484	nonsense_mediated_decay		12	-1	69357149	882
ENSMUSG00000074436	unprocessed_pseudogene	Defa-ps18	ENSMUST00000098889	unprocessed_pseudogene		8	1	21445069	371
ENSMUSG00000028078	protein_coding	Dclk2	ENSMUST00000193400	processed_transcript		3	-1	86799160	413
ENSMUSG00000036928	protein_coding	Stag3	ENSMUST00000161113	retained_intron		5	1	138280509	4669
ENSMUSG00000028078	protein_coding	Dclk2	ENSMUST00000193769	processed_transcript		3	-1	86798012	385
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000193909	retained_intron		3	-1	51260241	1557
ENSMUSG00000104476	TEC	Gm38211	ENSMUST00000192814	TEC		1	-1	45493052	7217
ENSMUSG00000032268	protein_coding	Tmprss5	ENSMUST00000170246	protein_coding	alternative2	9	1	49106080	1491
ENSMUSG00000085360	antisense	Arhgap27os2	ENSMUST00000123812	antisense		11	1	103355701	1390
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000220959	retained_intron		12	-1	69354069	640
ENSMUSG00000101732	unprocessed_pseudogene	Gm28328	ENSMUST00000188869	unprocessed_pseudogene		Y	1	8853288	109
ENSMUSG00000042642	protein_coding	Flad1	ENSMUST00000107426	protein_coding	principal1	3	-1	89411869	2238
ENSMUSG00000032268	protein_coding	Tmprss5	ENSMUST00000170426	nonsense_mediated_decay		9	1	49109002	1654
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000111213	protein_coding		2	1	102659281	2093
ENSMUSG00000020982	protein_coding	Nemf	ENSMUST00000222065	protein_coding		12	-1	69357134	473
ENSMUSG00000028078	protein_coding	Dclk2	ENSMUST00000194452	protein_coding		3	-1	86920374	2066
ENSMUSG00000021028	protein_coding	Mbip	ENSMUST00000218321	retained_intron		12	-1	56345835	724
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000195432	protein_coding		3	-1	51277368	2161
ENSMUSG00000113427	lincRNA	Gm46378	ENSMUST00000222979	lincRNA		12	1	106084370	4288
ENSMUSG00000104713	protein_coding	Gbp6	ENSMUST00000196520	protein_coding	principal1	5	-1	105293696	2604
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000125085	processed_transcript		2	1	102659223	254
ENSMUSG00000042642	protein_coding	Flad1	ENSMUST00000107429	protein_coding		3	-1	89411781	881
ENSMUSG00000105306	processed_pseudogene	Gm43171	ENSMUST00000199882	processed_pseudogene		6	-1	68146692	291
ENSMUSG00000021028	protein_coding	Mbip	ENSMUST00000218118	nonsense_mediated_decay		12	-1	56345821	417
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000137466	processed_transcript		2	1	102675484	342
ENSMUSG00000072473	protein_coding	1700024G13Rik	ENSMUST00000100723	protein_coding	principal1	14	-1	32388391	850
ENSMUSG00000104074	processed_pseudogene	Gm37025	ENSMUST00000195159	processed_pseudogene		3	1	86864492	829
ENSMUSG00000081242	processed_pseudogene	Gm15719	ENSMUST00000120619	processed_pseudogene		5	1	21689541	635
ENSMUSG00000085887	antisense	Arhgap27os3	ENSMUST00000124462	antisense		11	1	103344753	2729
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000136221	processed_transcript		2	1	102659258	209
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000183338	nonsense_mediated_decay		3	-1	51340658	1083
ENSMUSG00000103479	TEC	Gm37698	ENSMUST00000192605	TEC		13	1	41850718	463
ENSMUSG00000110128	processed_pseudogene	Gm45398	ENSMUST00000210561	processed_pseudogene		8	1	39206468	165
ENSMUSG00000036928	protein_coding	Stag3	ENSMUST00000159483	retained_intron		5	1	138280526	4456
ENSMUSG00000104713	protein_coding	Gbp6	ENSMUST00000199944	retained_intron		5	-1	105293698	4243
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000145921	processed_transcript		2	1	102659240	193
ENSMUSG00000042642	protein_coding	Flad1	ENSMUST00000162701	protein_coding		3	-1	89411870	488
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000128622	processed_transcript		2	1	102718974	210
ENSMUSG00000108707	unprocessed_pseudogene	Gm44575	ENSMUST00000206186	unprocessed_pseudogene		11	-1	73895768	41
ENSMUSG00000066491	processed_pseudogene	Cox6c2	ENSMUST00000149263	processed_pseudogene		12	-1	56373823	231
ENSMUSG00000106158	TEC	Gm43216	ENSMUST00000196295	TEC		5	1	21031752	1333
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000154446	protein_coding		2	1	102761173	567
ENSMUSG00000106558	processed_pseudogene	Gm5552	ENSMUST00000197149	processed_pseudogene		5	-1	29795037	515
ENSMUSG00000052798	protein_coding	Nup107	ENSMUST00000218576	nonsense_mediated_decay		10	-1	117792664	3092
ENSMUSG00000112626	processed_pseudogene	Gm18027	ENSMUST00000218947	processed_pseudogene		12	-1	56410557	619
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000123759	protein_coding		2	1	102706356	510
ENSMUSG00000085733	antisense	Arhgap27os1	ENSMUST00000130556	antisense		11	1	103363213	923
ENSMUSG00000018932	protein_coding	Map2k3	ENSMUST00000019076	protein_coding	principal1	11	1	60932033	2198
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000184677	nonsense_mediated_decay		3	-1	51277424	688
ENSMUSG00000005089	protein_coding	Slc1a2	ENSMUST00000136488	protein_coding		2	1	102755907	587
ENSMUSG00000044293	protein_coding	Olfr794	ENSMUST00000204820	protein_coding	principal1	10	1	129567655	3044
ENSMUSG00000053121	antisense	Gm5129	ENSMUST00000238564	antisense		5	-1	29735936	603
ENSMUSG00000053121	antisense	Gm5129	ENSMUST00000065372	antisense		5	-1	29735936	300
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000194209	processed_transcript		3	-1	51340561	549
ENSMUSG00000105999	processed_pseudogene	Gm2213	ENSMUST00000197485	processed_pseudogene		5	-1	29808158	688
ENSMUSG00000044293	protein_coding	Olfr794	ENSMUST00000059957	protein_coding	principal1	10	1	129570657	963
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000156983	protein_coding		3	-1	51277444	378
ENSMUSG00000018932	protein_coding	Map2k3	ENSMUST00000130269	nonsense_mediated_decay		11	1	60932066	2096
ENSMUSG00000107555	unprocessed_pseudogene	Olfr795-ps1	ENSMUST00000205245	unprocessed_pseudogene		10	1	129578680	763
ENSMUSG00000020096	protein_coding	Tbata	ENSMUST00000148181	protein_coding		10	1	61175262	1017
ENSMUSG00000035539	protein_coding	Ccdc180	ENSMUST00000127261	retained_intron		4	1	45890303	1873
ENSMUSG00000087185	antisense	Gm13872	ENSMUST00000143995	antisense		2	-1	102746746	1408
ENSMUSG00000020096	protein_coding	Tbata	ENSMUST00000151886	protein_coding		10	1	61175262	915
ENSMUSG00000106741	lincRNA	4930513D17Rik	ENSMUST00000202800	lincRNA		5	-1	39603531	1159
ENSMUSG00000113856	processed_transcript	Gm10790	ENSMUST00000221285	lincRNA		13	1	41865915	1696
ENSMUSG00000020096	protein_coding	Tbata	ENSMUST00000140456	protein_coding		10	1	61175393	953
ENSMUSG00000106741	lincRNA	4930513D17Rik	ENSMUST00000202742	lincRNA		5	-1	39603574	816
ENSMUSG00000087185	antisense	Gm13872	ENSMUST00000147082	antisense		2	-1	102746760	657
ENSMUSG00000113856	processed_transcript	Gm10790	ENSMUST00000221085	retained_intron		13	1	41865916	777
ENSMUSG00000106741	lincRNA	4930513D17Rik	ENSMUST00000200770	lincRNA		5	-1	39603529	553
ENSMUSG00000037174	protein_coding	Elf2	ENSMUST00000163748	protein_coding	principal3	3	-1	51325987	2656
ENSMUSG00000108714	antisense	Gm21057	ENSMUST00000206111	antisense		7	-1	80075247	512
ENSMUSG00000087185	antisense	Gm13872	ENSMUST00000137123	antisense		2	-1	102746759	330
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000075610	protein_coding	principal1	7	1	131371141	1135
ENSMUSG00000100071	lincRNA	Gm28707	ENSMUST00000186134	lincRNA		13	1	42049334	558
ENSMUSG00000052012	protein_coding	Olfr796	ENSMUST00000214584	protein_coding	principal1	10	-1	129612570	3554
ENSMUSG00000108714	antisense	Gm21057	ENSMUST00000206022	antisense		7	-1	80075267	670
ENSMUSG00000106679	lincRNA	Gm42524	ENSMUST00000202881	lincRNA		5	1	39458097	2214
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000079724	protein_coding	principal3	3	-1	89998697	1139
ENSMUSG00000020096	protein_coding	Tbata	ENSMUST00000126831	nonsense_mediated_decay		10	1	61175942	1376
ENSMUSG00000057037	protein_coding	Cfhr1	ENSMUST00000023965	protein_coding	principal1	1	-1	139560272	1793
ENSMUSG00000115749	lincRNA	Gm41289	ENSMUST00000227504	lincRNA		15	-1	32773152	436
ENSMUSG00000087440	TEC	4930577N17Rik	ENSMUST00000139771	TEC		3	1	51276759	1625
ENSMUSG00000029641	protein_coding	Rasl11a	ENSMUST00000031646	protein_coding	principal1	5	1	146845071	1126
ENSMUSG00000108365	TEC	Gm44951	ENSMUST00000206449	TEC		7	1	80036705	2024
ENSMUSG00000052012	protein_coding	Olfr796	ENSMUST00000037071	protein_coding	principal1	10	-1	129608479	933
ENSMUSG00000104200	TEC	Gm37399	ENSMUST00000195224	TEC		3	-1	51302903	416
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000145114	nonsense_mediated_decay		7	1	131371146	1116
ENSMUSG00000057037	protein_coding	Cfhr1	ENSMUST00000161224	protein_coding		1	-1	139553599	408
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000197767	protein_coding	alternative2	3	-1	89998666	1092
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000207419	retained_intron		7	1	131371156	675
ENSMUSG00000057337	protein_coding	Chst3	ENSMUST00000068690	protein_coding	alternative2	10	-1	60188707	5985
ENSMUSG00000015652	protein_coding	Steap1	ENSMUST00000015796	protein_coding	principal1	5	-1	5749326	1230
ENSMUSG00000115317	lincRNA	Gm32618	ENSMUST00000147013	lincRNA		15	1	32778904	1334
ENSMUSG00000029641	protein_coding	Rasl11a	ENSMUST00000198570	retained_intron		5	1	146845765	530
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000197481	retained_intron		3	-1	89995953	395
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000141914	nonsense_mediated_decay		7	1	131371157	459
ENSMUSG00000015652	protein_coding	Steap1	ENSMUST00000169542	protein_coding		5	-1	5740401	713
ENSMUSG00000043372	protein_coding	Hexim2	ENSMUST00000150275	protein_coding		11	1	103132429	681
ENSMUSG00000085985	lincRNA	Gm11682	ENSMUST00000144689	lincRNA		11	1	110544507	516
ENSMUSG00000057337	protein_coding	Chst3	ENSMUST00000167915	protein_coding	alternative2	10	-1	60194239	1672
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000207933	retained_intron		7	1	131371167	543
ENSMUSG00000018932	protein_coding	Map2k3	ENSMUST00000145828	retained_intron		11	1	60932054	1346
ENSMUSG00000044968	protein_coding	Napepld	ENSMUST00000115217	protein_coding	principal1	5	-1	21701394	3954
ENSMUSG00000069554	lincRNA	I830134H01Rik	ENSMUST00000181592	lincRNA		19	-1	38054528	2755
ENSMUSG00000101056	unprocessed_pseudogene	Gm28329	ENSMUST00000191208	unprocessed_pseudogene		Y	-1	8912030	689
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000197432	protein_coding		3	-1	89996270	370
ENSMUSG00000018932	protein_coding	Map2k3	ENSMUST00000126043	processed_transcript		11	1	60941880	694
ENSMUSG00000099904	unprocessed_pseudogene	Gm28270	ENSMUST00000188550	unprocessed_pseudogene		Y	1	8931764	109
ENSMUSG00000069554	lincRNA	I830134H01Rik	ENSMUST00000092265	lincRNA		19	-1	38054528	2645
ENSMUSG00000018932	protein_coding	Map2k3	ENSMUST00000137739	retained_intron		11	1	60932054	455
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000124672	retained_intron		7	1	131373035	1615
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000197786	protein_coding	alternative2	3	-1	89998677	857
ENSMUSG00000018932	protein_coding	Map2k3	ENSMUST00000137609	retained_intron		11	1	60950662	600
ENSMUSG00000118129	processed_pseudogene	Gm50327	ENSMUST00000237724	processed_pseudogene		19	-1	3932090	296
ENSMUSG00000057337	protein_coding	Chst3	ENSMUST00000135158	protein_coding	principal2	10	-1	60219260	6108
ENSMUSG00000095532	unprocessed_pseudogene	Mup-ps13	ENSMUST00000120662	unprocessed_pseudogene		4	1	61534230	545
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000128092	protein_coding		7	1	131373723	602
ENSMUSG00000099523	unprocessed_pseudogene	Gm28327	ENSMUST00000189638	unprocessed_pseudogene		Y	-1	8943711	615
ENSMUSG00000105007	processed_pseudogene	Gm43170	ENSMUST00000199827	processed_pseudogene		6	1	68147120	612
ENSMUSG00000043372	protein_coding	Hexim2	ENSMUST00000107037	protein_coding	principal1	11	1	103133314	1221
ENSMUSG00000100542	processed_pseudogene	Gm28097	ENSMUST00000187333	processed_pseudogene		Y	-1	8956981	366
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000207489	protein_coding		7	1	131374122	581
ENSMUSG00000099956	unprocessed_pseudogene	Gm29365	ENSMUST00000189461	unprocessed_pseudogene		Y	-1	8980699	699
ENSMUSG00000044968	protein_coding	Napepld	ENSMUST00000060899	protein_coding	principal1	5	-1	21701396	3724
ENSMUSG00000106630	IG_V_pseudogene	Igkv2-116	ENSMUST00000199327	IG_V_pseudogene		6	1	68151885	362
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000199014	retained_intron		3	-1	89998686	1280
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000133284	protein_coding		7	1	131383988	388
ENSMUSG00000043372	protein_coding	Hexim2	ENSMUST00000124928	protein_coding		11	1	103133339	654
ENSMUSG00000003345	protein_coding	Csnk1g2	ENSMUST00000079773	protein_coding		10	1	80622838	2348
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000197725	protein_coding	alternative2	3	-1	89998620	648
ENSMUSG00000109601	processed_pseudogene	Zfp148-ps1	ENSMUST00000211201	processed_pseudogene		8	1	39282243	2453
ENSMUSG00000027239	protein_coding	Mdk	ENSMUST00000028672	protein_coding	principal1	2	-1	91932297	1054
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000148533	retained_intron		7	1	131384257	447
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000198782	protein_coding	alternative2	3	-1	89998389	855
ENSMUSG00000063179	protein_coding	Pstk	ENSMUST00000208084	retained_intron		7	1	131389189	5294
ENSMUSG00000100801	processed_pseudogene	Gm15459	ENSMUST00000117405	processed_pseudogene		5	-1	5783555	1941
ENSMUSG00000042834	protein_coding	Nrep	ENSMUST00000168890	protein_coding	principal1	18	-1	33464029	2185
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000198889	retained_intron		3	-1	89996336	522
ENSMUSG00000100080	lincRNA	Gm29364	ENSMUST00000185289	lincRNA		Y	-1	8990039	2167
ENSMUSG00000043372	protein_coding	Hexim2	ENSMUST00000062530	protein_coding	principal1	11	1	103133345	1910
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000199163	nonsense_mediated_decay		3	-1	89998680	877
ENSMUSG00000042834	protein_coding	Nrep	ENSMUST00000171533	protein_coding	principal1	18	-1	33463435	3311
ENSMUSG00000101441	lincRNA	Gm29363	ENSMUST00000189365	lincRNA		Y	1	9022596	621
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000199469	retained_intron		3	-1	89998780	837
ENSMUSG00000043372	protein_coding	Hexim2	ENSMUST00000130341	protein_coding		11	1	103133865	370
ENSMUSG00000028771	protein_coding	Ptpn12	ENSMUST00000030556	protein_coding	principal1	5	-1	21055911	3280
ENSMUSG00000027239	protein_coding	Mdk	ENSMUST00000069423	protein_coding	principal1	2	-1	91931780	773
ENSMUSG00000104952	processed_pseudogene	Gm38697	ENSMUST00000198061	processed_pseudogene		5	1	5798197	1746
ENSMUSG00000027944	protein_coding	Hax1	ENSMUST00000199740	protein_coding		3	-1	89998362	372
ENSMUSG00000042834	protein_coding	Nrep	ENSMUST00000237066	protein_coding	principal1	18	-1	33463854	843
ENSMUSG00000021497	protein_coding	Txndc15	ENSMUST00000021959	protein_coding	principal1	13	1	55714650	1527
ENSMUSG00000105370	processed_pseudogene	Gm42718	ENSMUST00000197319	processed_pseudogene		5	-1	6313991	2681
ENSMUSG00000030862	protein_coding	Cpxm2	ENSMUST00000209155	protein_coding		7	-1	132049118	402
ENSMUSG00000049562	protein_coding	Ap5b1	ENSMUST00000235575	protein_coding	principal1	19	1	5568025	2785
ENSMUSG00000074881	protein_coding	Mageb3	ENSMUST00000104936	protein_coding	principal1	2	-1	121956092	2341
ENSMUSG00000059169	protein_coding	Krt40	ENSMUST00000107443	protein_coding		11	-1	99543158	1080
ENSMUSG00000028771	protein_coding	Ptpn12	ENSMUST00000151366	retained_intron		5	-1	20989261	1104
ENSMUSG00000035539	protein_coding	Ccdc180	ENSMUST00000149903	protein_coding	alternative2	4	1	45890852	4485
ENSMUSG00000028771	protein_coding	Ptpn12	ENSMUST00000148711	retained_intron		5	-1	21001411	618
ENSMUSG00000118504	protein_coding	4933434E20Rik	ENSMUST00000239076	nonsense_mediated_decay	principal5	3	1	90052904	1545
ENSMUSG00000021497	protein_coding	Txndc15	ENSMUST00000223649	retained_intron		13	1	55717839	3288
ENSMUSG00000035539	protein_coding	Ccdc180	ENSMUST00000151024	protein_coding		4	1	45914369	1127
ENSMUSG00000091077	protein_coding	Gm21292	ENSMUST00000190329	protein_coding	principal1	Y	-1	9133924	1225
ENSMUSG00000003345	protein_coding	Csnk1g2	ENSMUST00000085435	protein_coding	principal1	10	1	80629656	1825
ENSMUSG00000049562	protein_coding	Ap5b1	ENSMUST00000235542	protein_coding		19	1	5568053	675
ENSMUSG00000042834	protein_coding	Nrep	ENSMUST00000051087	protein_coding	principal1	18	-1	33463739	659
ENSMUSG00000118504	protein_coding	4933434E20Rik	ENSMUST00000239082	nonsense_mediated_decay	alternative2	3	1	90058743	2360
ENSMUSG00000091077	protein_coding	Gm21292	ENSMUST00000171947	protein_coding	principal1	Y	-1	9132561	1563
ENSMUSG00000112558	lincRNA	Gm32364	ENSMUST00000218174	lincRNA		10	1	67575883	485
ENSMUSG00000027239	protein_coding	Mdk	ENSMUST00000090602	protein_coding	principal1	2	-1	91931699	714
ENSMUSG00000019173	protein_coding	Rab5c	ENSMUST00000107364	protein_coding	principal1	11	-1	100738215	1915
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000187839	protein_coding	principal3	14	1	47648448	7945
ENSMUSG00000106308	processed_pseudogene	Gm42719	ENSMUST00000197393	processed_pseudogene		5	1	6358836	355
ENSMUSG00000049562	protein_coding	Ap5b1	ENSMUST00000096318	protein_coding	principal1	19	1	5568074	3092
ENSMUSG00000059169	protein_coding	Krt40	ENSMUST00000074253	protein_coding	principal1	11	-1	99543158	1320
ENSMUSG00000035539	protein_coding	Ccdc180	ENSMUST00000178561	protein_coding	principal2	4	1	45890303	5081
ENSMUSG00000116819	bidirectional_promoter_lncRNA	Gm49586	ENSMUST00000232122	bidirectional_promoter_lncRNA		12	1	21373765	432
ENSMUSG00000028771	protein_coding	Ptpn12	ENSMUST00000126853	retained_intron		5	-1	21009606	796
ENSMUSG00000027239	protein_coding	Mdk	ENSMUST00000111309	protein_coding	principal1	2	-1	91931688	771
ENSMUSG00000112097	lincRNA	Gm32515	ENSMUST00000219396	lincRNA		10	1	67665359	350
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000190252	protein_coding	alternative2	14	1	47649311	4436
ENSMUSG00000073830	protein_coding	Mup14	ENSMUST00000125461	protein_coding		4	-1	61303802	741
ENSMUSG00000003345	protein_coding	Csnk1g2	ENSMUST00000219814	processed_transcript		10	1	80634395	276
ENSMUSG00000083172	unprocessed_pseudogene	Gm13409	ENSMUST00000122072	unprocessed_pseudogene		2	-1	24266338	546
ENSMUSG00000094679	protein_coding	Gm21721	ENSMUST00000189253	protein_coding	principal1	Y	-1	9202190	1225
ENSMUSG00000110031	processed_pseudogene	Gm18205	ENSMUST00000209215	processed_pseudogene		7	1	12760708	841
ENSMUSG00000094679	protein_coding	Gm21721	ENSMUST00000179595	protein_coding	principal1	Y	-1	9200643	684
ENSMUSG00000040495	protein_coding	Chrm4	ENSMUST00000045537	protein_coding	principal1	2	1	91927249	1440
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000186466	protein_coding		14	1	47649316	634
ENSMUSG00000081879	processed_pseudogene	Gm11933	ENSMUST00000121550	processed_pseudogene		4	1	32611351	375
ENSMUSG00000112266	lincRNA	Gm48843	ENSMUST00000218190	lincRNA		10	1	14197015	1590
ENSMUSG00000112619	lincRNA	1700030E10Rik	ENSMUST00000218164	lincRNA		10	-1	67718039	721
ENSMUSG00000104663	processed_pseudogene	Gm3203	ENSMUST00000197670	processed_pseudogene		5	-1	6429232	2389
ENSMUSG00000076492	TR_J_gene	Trbj2-1	ENSMUST00000103293	TR_J_gene	principal1	6	1	41542754	50
ENSMUSG00000112396	TEC	Gm47574	ENSMUST00000219743	TEC		10	1	67707838	1631
ENSMUSG00000112238	lincRNA	Gm48844	ENSMUST00000218029	lincRNA		10	-1	14233958	132
ENSMUSG00000034930	protein_coding	Rtkn	ENSMUST00000065512	protein_coding	alternative2	6	1	83135812	2191
ENSMUSG00000106064	lincRNA	Gm40263	ENSMUST00000197468	lincRNA		5	1	6414399	580
ENSMUSG00000112284	lincRNA	Gm48845	ENSMUST00000219646	lincRNA		10	1	14226489	300
ENSMUSG00000019173	protein_coding	Rab5c	ENSMUST00000019317	protein_coding		11	-1	100738215	1967
ENSMUSG00000118506	protein_coding	1700094D03Rik	ENSMUST00000238911	protein_coding	principal1	3	1	90062796	625
ENSMUSG00000067700	protein_coding	Gm5862	ENSMUST00000072286	protein_coding	principal1	5	-1	26022916	1972
ENSMUSG00000076493	TR_J_gene	Trbj2-2	ENSMUST00000103294	TR_J_gene	principal1	6	1	41542957	51
ENSMUSG00000051314	protein_coding	Ffar2	ENSMUST00000053156	protein_coding	principal1	7	-1	30823775	2301
ENSMUSG00000118506	protein_coding	1700094D03Rik	ENSMUST00000029551	protein_coding		3	1	90062796	3097
ENSMUSG00000019173	protein_coding	Rab5c	ENSMUST00000155843	protein_coding		11	-1	100730215	412
ENSMUSG00000102229	TEC	Gm37299	ENSMUST00000193951	TEC		10	1	14313908	826
ENSMUSG00000003345	protein_coding	Csnk1g2	ENSMUST00000217902	retained_intron		10	1	80636165	4135
ENSMUSG00000112679	lincRNA	Gm40603	ENSMUST00000218016	lincRNA		10	1	14296921	1202
ENSMUSG00000073830	protein_coding	Mup14	ENSMUST00000075206	protein_coding	principal1	4	-1	61304000	925
ENSMUSG00000083106	processed_pseudogene	Gm15309	ENSMUST00000121644	processed_pseudogene		8	1	21454424	240
ENSMUSG00000112679	lincRNA	Gm40603	ENSMUST00000219975	lincRNA		10	1	14296963	1642
ENSMUSG00000069223	antisense	4930451E10Rik	ENSMUST00000154384	antisense		13	-1	55784494	440
ENSMUSG00000003345	protein_coding	Csnk1g2	ENSMUST00000218093	retained_intron		10	1	80638270	517
ENSMUSG00000019173	protein_coding	Rab5c	ENSMUST00000155500	protein_coding		11	-1	100738176	441
ENSMUSG00000090005	sense_intronic	Gm16540	ENSMUST00000160263	sense_intronic		3	1	90057259	426
ENSMUSG00000118292	lincRNA	Gm10549	ENSMUST00000238186	lincRNA		18	1	33464163	2712
ENSMUSG00000118292	lincRNA	Gm10549	ENSMUST00000237662	lincRNA		18	1	33466205	708
ENSMUSG00000034930	protein_coding	Rtkn	ENSMUST00000121093	protein_coding	principal3	6	1	83137089	2597
ENSMUSG00000069223	antisense	4930451E10Rik	ENSMUST00000130840	antisense		13	-1	55784479	409
ENSMUSG00000003345	protein_coding	Csnk1g2	ENSMUST00000220163	nonsense_mediated_decay		10	1	80639161	440
ENSMUSG00000069223	antisense	4930451E10Rik	ENSMUST00000152292	antisense		13	-1	55784505	557
ENSMUSG00000003345	protein_coding	Csnk1g2	ENSMUST00000220025	retained_intron		10	1	80639396	624
ENSMUSG00000051314	protein_coding	Ffar2	ENSMUST00000168528	protein_coding	principal1	7	-1	30821648	1210
ENSMUSG00000028771	protein_coding	Ptpn12	ENSMUST00000151813	nonsense_mediated_decay		5	-1	21055753	831
ENSMUSG00000073830	protein_coding	Mup14	ENSMUST00000136039	retained_intron		4	-1	61303365	817
ENSMUSG00000076494	TR_J_gene	Trbj2-3	ENSMUST00000103295	TR_J_gene	principal1	6	1	41543223	49
ENSMUSG00000034930	protein_coding	Rtkn	ENSMUST00000087938	protein_coding	principal3	6	1	83137110	3080
ENSMUSG00000003345	protein_coding	Csnk1g2	ENSMUST00000220431	retained_intron		10	1	80639639	473
ENSMUSG00000073830	protein_coding	Mup14	ENSMUST00000071005	protein_coding	principal1	4	-1	61303998	652
ENSMUSG00000067455	protein_coding	H4c11	ENSMUST00000087714	protein_coding	principal1	13	1	21735064	774
ENSMUSG00000028771	protein_coding	Ptpn12	ENSMUST00000199774	nonsense_mediated_decay		5	-1	21055897	790
ENSMUSG00000051314	protein_coding	Ffar2	ENSMUST00000186339	protein_coding		7	-1	30821138	641
ENSMUSG00000028771	protein_coding	Ptpn12	ENSMUST00000140057	nonsense_mediated_decay		5	-1	21055725	541
ENSMUSG00000070822	protein_coding	Zscan18	ENSMUST00000211665	retained_intron		7	-1	12771116	1969
ENSMUSG00000076495	TR_J_gene	Trbj2-4	ENSMUST00000103296	TR_J_gene	principal1	6	1	41543362	49
ENSMUSG00000004872	protein_coding	Pax3	ENSMUST00000004994	protein_coding	principal1	1	-1	78196838	3078
ENSMUSG00000034930	protein_coding	Rtkn	ENSMUST00000130622	protein_coding		6	1	83142392	653
ENSMUSG00000051314	protein_coding	Ffar2	ENSMUST00000186534	protein_coding		7	-1	30820977	730
ENSMUSG00000110346	processed_pseudogene	Gm18122	ENSMUST00000211390	processed_pseudogene		7	-1	11001932	904
ENSMUSG00000034930	protein_coding	Rtkn	ENSMUST00000129316	protein_coding		6	1	83142564	434
ENSMUSG00000064288	protein_coding	H4c12	ENSMUST00000102983	protein_coding	principal1	13	-1	21750505	312
ENSMUSG00000025381	protein_coding	Cnpy2	ENSMUST00000219037	protein_coding	principal1	10	1	128322459	1383
ENSMUSG00000021496	protein_coding	Pcbd2	ENSMUST00000124968	protein_coding	principal1	13	1	55727368	546
ENSMUSG00000051314	protein_coding	Ffar2	ENSMUST00000186059	protein_coding		7	-1	30821147	565
ENSMUSG00000021496	protein_coding	Pcbd2	ENSMUST00000021958	protein_coding		13	1	55727368	544
ENSMUSG00000034930	protein_coding	Rtkn	ENSMUST00000203183	retained_intron		6	1	83147835	792
ENSMUSG00000030862	protein_coding	Cpxm2	ENSMUST00000033149	protein_coding	principal1	7	-1	132154739	3498
ENSMUSG00000025381	protein_coding	Cnpy2	ENSMUST00000026446	protein_coding	principal1	10	1	128322468	763
ENSMUSG00000051314	protein_coding	Ffar2	ENSMUST00000163504	protein_coding	principal1	7	-1	30821139	1913
ENSMUSG00000034930	protein_coding	Rtkn	ENSMUST00000133226	retained_intron		6	1	83150755	750
ENSMUSG00000025381	protein_coding	Cnpy2	ENSMUST00000220391	retained_intron		10	1	128322514	598
ENSMUSG00000030775	protein_coding	Trat1	ENSMUST00000231701	protein_coding	principal1	16	-1	48772021	4665
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000189986	nonsense_mediated_decay		14	1	47649394	4298
ENSMUSG00000063021	protein_coding	H2ac15	ENSMUST00000074752	protein_coding	principal1	13	-1	21753827	393
ENSMUSG00000079114	protein_coding	Defa42	ENSMUST00000110752	protein_coding	principal1	8	-1	21456560	488
ENSMUSG00000034930	protein_coding	Rtkn	ENSMUST00000213056	protein_coding		6	1	83151310	608
ENSMUSG00000112537	TEC	4930543I11Rik	ENSMUST00000219006	TEC		10	1	67785735	959
ENSMUSG00000025381	protein_coding	Cnpy2	ENSMUST00000219836	protein_coding		10	1	128322545	607
ENSMUSG00000111956	processed_pseudogene	Gm29774	ENSMUST00000219270	processed_pseudogene		10	-1	67793202	436
ENSMUSG00000030862	protein_coding	Cpxm2	ENSMUST00000150405	retained_intron		7	-1	132059863	707
ENSMUSG00000116971	lincRNA	Gm49766	ENSMUST00000232007	lincRNA		10	1	67785749	1519
ENSMUSG00000105678	TEC	Gm43705	ENSMUST00000195958	TEC		5	-1	55792887	3717
ENSMUSG00000025381	protein_coding	Cnpy2	ENSMUST00000219199	retained_intron		10	1	128322847	420
ENSMUSG00000004872	protein_coding	Pax3	ENSMUST00000087086	protein_coding		1	-1	78197134	3863
ENSMUSG00000070822	protein_coding	Zscan18	ENSMUST00000211392	protein_coding	principal1	7	-1	12780654	3709
ENSMUSG00000117689	processed_pseudogene	Gm50392	ENSMUST00000237469	processed_pseudogene		18	1	33576468	664
ENSMUSG00000070822	protein_coding	Zscan18	ENSMUST00000210650	protein_coding	principal1	7	-1	12803635	3668
ENSMUSG00000030775	protein_coding	Trat1	ENSMUST00000170861	nonsense_mediated_decay		16	-1	48771956	647
ENSMUSG00000036087	protein_coding	Slain2	ENSMUST00000144843	protein_coding	alternative1	5	1	72914304	4833
ENSMUSG00000076496	TR_J_gene	Trbj2-5	ENSMUST00000103297	TR_J_gene	principal1	6	1	41543453	49
ENSMUSG00000029630	protein_coding	Cyp3a25	ENSMUST00000145062	nonsense_mediated_decay		5	-1	146009618	1914
ENSMUSG00000030862	protein_coding	Cpxm2	ENSMUST00000127039	retained_intron		7	-1	132154622	2128
ENSMUSG00000070822	protein_coding	Zscan18	ENSMUST00000209869	retained_intron		7	-1	12772237	552
ENSMUSG00000030862	protein_coding	Cpxm2	ENSMUST00000136188	processed_transcript		7	-1	132145611	450
ENSMUSG00000030775	protein_coding	Trat1	ENSMUST00000239408	protein_coding		16	-1	48771956	684
ENSMUSG00000070822	protein_coding	Zscan18	ENSMUST00000210891	nonsense_mediated_decay		7	-1	12774339	629
ENSMUSG00000004872	protein_coding	Pax3	ENSMUST00000172555	processed_transcript		1	-1	78197113	3271
ENSMUSG00000095217	protein_coding	H2bc15	ENSMUST00000091709	protein_coding	principal1	13	1	21754123	381
ENSMUSG00000070822	protein_coding	Zscan18	ENSMUST00000046245	protein_coding	principal1	7	-1	12775658	3626
ENSMUSG00000090818	TR_J_pseudogene	Trbj2-6	ENSMUST00000169595	TR_J_pseudogene		6	1	41543598	48
ENSMUSG00000029680	protein_coding	Hyal4	ENSMUST00000031691	protein_coding	principal1	6	1	24748329	3269
ENSMUSG00000116640	processed_pseudogene	Gm8670	ENSMUST00000231404	processed_pseudogene		16	-1	48750448	1049
ENSMUSG00000109724	transcribed_processed_pseudogene	Gm18194	ENSMUST00000210952	processed_transcript		7	-1	12799164	3442
ENSMUSG00000081321	processed_pseudogene	Gm15304	ENSMUST00000122150	processed_pseudogene		8	1	21460958	2640
ENSMUSG00000109724	transcribed_processed_pseudogene	Gm18194	ENSMUST00000210455	transcribed_processed_pseudogene		7	-1	12797308	481
ENSMUSG00000024778	protein_coding	Fas	ENSMUST00000025691	protein_coding	principal2	19	1	34290666	1481
ENSMUSG00000109594	TEC	1700047O18Rik	ENSMUST00000209738	TEC		7	1	12780860	743
ENSMUSG00000098180	processed_pseudogene	Gm5430	ENSMUST00000182525	processed_pseudogene		17	-1	25327526	915
ENSMUSG00000110124	processed_pseudogene	Gm4247	ENSMUST00000211441	processed_pseudogene		7	-1	12794869	1042
ENSMUSG00000078675	protein_coding	Mup16	ENSMUST00000107483	protein_coding	principal1	4	-1	61519531	927
ENSMUSG00000111989	processed_pseudogene	Gm18696	ENSMUST00000220103	processed_pseudogene		12	-1	9473374	274
ENSMUSG00000109925	processed_pseudogene	Gm45315	ENSMUST00000209283	processed_pseudogene		7	1	12797529	333
ENSMUSG00000027360	protein_coding	Hdc	ENSMUST00000028838	protein_coding	principal1	2	-1	126618678	2392
ENSMUSG00000024778	protein_coding	Fas	ENSMUST00000235709	nonsense_mediated_decay		19	1	34290680	1625
ENSMUSG00000113913	lincRNA	Gm46323	ENSMUST00000223136	lincRNA		12	1	9371438	628
ENSMUSG00000112225	lincRNA	Gm48854	ENSMUST00000218527	lincRNA		10	1	14327411	890
ENSMUSG00000060647	processed_pseudogene	Gm7099	ENSMUST00000080066	processed_pseudogene		12	1	9429547	554
ENSMUSG00000036087	protein_coding	Slain2	ENSMUST00000143829	protein_coding	principal3	5	1	72914369	4828
ENSMUSG00000078675	protein_coding	Mup16	ENSMUST00000095051	protein_coding	principal1	4	-1	61519467	721
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000132906	processed_transcript		4	-1	141078342	1874
ENSMUSG00000076497	TR_J_gene	Trbj2-7	ENSMUST00000103298	TR_J_gene	principal1	6	1	41543810	47
ENSMUSG00000027360	protein_coding	Hdc	ENSMUST00000124396	processed_transcript		2	-1	126598261	596
ENSMUSG00000105347	TEC	Gm43503	ENSMUST00000200033	TEC		5	-1	44683601	3408
ENSMUSG00000036087	protein_coding	Slain2	ENSMUST00000183284	retained_intron		5	1	72914416	4070
ENSMUSG00000069729	protein_coding	Arid1b	ENSMUST00000124362	processed_transcript		17	1	4994332	418
ENSMUSG00000105136	TEC	8030487O14Rik	ENSMUST00000200244	TEC		5	-1	44514560	903
ENSMUSG00000104990	TEC	Gm43504	ENSMUST00000196056	TEC		5	-1	44666731	2038
ENSMUSG00000024778	protein_coding	Fas	ENSMUST00000112472	protein_coding		19	1	34290682	532
ENSMUSG00000030800	protein_coding	Prss8	ENSMUST00000032988	protein_coding	principal1	7	-1	127930104	1852
ENSMUSG00000095978	unprocessed_pseudogene	Mup-ps11	ENSMUST00000178040	unprocessed_pseudogene		4	1	61318730	545
ENSMUSG00000036087	protein_coding	Slain2	ENSMUST00000200785	protein_coding		5	1	72914668	745
ENSMUSG00000024778	protein_coding	Fas	ENSMUST00000235232	protein_coding	alternative2	19	1	34290682	1405
ENSMUSG00000030800	protein_coding	Prss8	ENSMUST00000206124	protein_coding	principal1	7	-1	127930104	1709
ENSMUSG00000073835	unprocessed_pseudogene	Mup-ps12	ENSMUST00000126217	unprocessed_pseudogene		4	1	61452244	549
ENSMUSG00000095925	unprocessed_pseudogene	Defa-ps17	ENSMUST00000121849	unprocessed_pseudogene		8	1	21473251	171
ENSMUSG00000027360	protein_coding	Hdc	ENSMUST00000138752	retained_intron		2	-1	126618661	4518
ENSMUSG00000024778	protein_coding	Fas	ENSMUST00000236731	processed_transcript		19	1	34300075	509
ENSMUSG00000061436	protein_coding	Hipk2	ENSMUST00000161779	protein_coding	principal3	6	-1	38876165	7684
ENSMUSG00000036087	protein_coding	Slain2	ENSMUST00000145939	retained_intron		5	1	72948499	1138
ENSMUSG00000073119	protein_coding	Speer4a	ENSMUST00000079447	protein_coding	principal1	5	-1	26039558	2980
ENSMUSG00000052798	protein_coding	Nup107	ENSMUST00000064848	protein_coding	principal2	10	-1	117792705	3114
ENSMUSG00000054272	protein_coding	Zscan4c	ENSMUST00000131379	protein_coding	principal1	7	1	11005745	2276
ENSMUSG00000104894	antisense	Gm43507	ENSMUST00000196411	antisense		5	1	44641484	675
ENSMUSG00000030800	protein_coding	Prss8	ENSMUST00000206568	nonsense_mediated_decay		7	-1	127930095	795
ENSMUSG00000052154	TEC	Gm9870	ENSMUST00000201161	TEC		5	-1	72914942	2356
ENSMUSG00000104894	antisense	Gm43507	ENSMUST00000200281	antisense		5	1	44651667	2011
ENSMUSG00000027360	protein_coding	Hdc	ENSMUST00000132382	processed_transcript		2	-1	126607641	529
ENSMUSG00000052154	TEC	Gm9870	ENSMUST00000063874	pseudogene		5	-1	72914942	645
ENSMUSG00000091800	IG_V_pseudogene	Igkv1-115	ENSMUST00000198714	IG_V_pseudogene		6	1	68161415	302
ENSMUSG00000105282	TEC	Gm42981	ENSMUST00000200184	TEC		5	-1	44495421	3252
ENSMUSG00000110072	processed_pseudogene	Gm45327	ENSMUST00000211612	processed_pseudogene		7	1	11020329	565
ENSMUSG00000027360	protein_coding	Hdc	ENSMUST00000148591	processed_transcript		2	-1	126619299	354
ENSMUSG00000110030	TEC	Gm45546	ENSMUST00000211053	TEC		8	1	70610425	2394
ENSMUSG00000030801	protein_coding	Kat8	ENSMUST00000206071	retained_intron		7	1	127912516	1014
ENSMUSG00000052798	protein_coding	Nup107	ENSMUST00000218375	retained_intron		10	-1	117761357	496
ENSMUSG00000109952	processed_pseudogene	Gm45395	ENSMUST00000209891	processed_pseudogene		7	-1	11047842	559
ENSMUSG00000049350	protein_coding	Zg16	ENSMUST00000205424	protein_coding	principal1	7	-1	127052675	682
ENSMUSG00000086866	antisense	4930512H18Rik	ENSMUST00000133752	antisense		8	1	61849006	1493
ENSMUSG00000086866	antisense	4930512H18Rik	ENSMUST00000211790	antisense		8	1	61913060	1382
ENSMUSG00000085331	lincRNA	Gm11274	ENSMUST00000146857	lincRNA		13	1	21769125	481
ENSMUSG00000109955	processed_pseudogene	Gm18644	ENSMUST00000211458	processed_pseudogene		8	-1	39311694	815
ENSMUSG00000110131	processed_pseudogene	Gm18066	ENSMUST00000210904	processed_pseudogene		8	-1	61821516	1774
ENSMUSG00000032839	protein_coding	Trpc1	ENSMUST00000189137	protein_coding	principal3	9	-1	95750358	4559
ENSMUSG00000090623	unprocessed_pseudogene	Cfhr3	ENSMUST00000170441	unprocessed_pseudogene		1	-1	139660899	1022
ENSMUSG00000049350	protein_coding	Zg16	ENSMUST00000205559	protein_coding		7	-1	127087328	723
ENSMUSG00000109827	lincRNA	Gm6213	ENSMUST00000209966	lincRNA		8	1	39297980	638
ENSMUSG00000049350	protein_coding	Zg16	ENSMUST00000205623	processed_transcript		7	-1	127087286	378
ENSMUSG00000049988	protein_coding	Lrrc25	ENSMUST00000210609	protein_coding		8	1	70616155	449
ENSMUSG00000086657	processed_transcript	Stamos	ENSMUST00000152524	antisense		2	-1	14073934	801
ENSMUSG00000032839	protein_coding	Trpc1	ENSMUST00000053785	protein_coding	alternative2	9	-1	95750358	2912
ENSMUSG00000105363	IG_V_pseudogene	Igkv11-114	ENSMUST00000200013	IG_V_pseudogene		6	1	68164457	346
ENSMUSG00000086657	processed_transcript	Stamos	ENSMUST00000194771	retained_intron		2	-1	14073848	1361
ENSMUSG00000029630	protein_coding	Cyp3a25	ENSMUST00000068317	protein_coding	principal1	5	-1	146009617	2000
ENSMUSG00000049350	protein_coding	Zg16	ENSMUST00000051122	protein_coding	principal1	7	-1	127051977	636
ENSMUSG00000076498	TR_C_gene	Trbc2	ENSMUST00000103299	TR_C_gene	principal1	6	1	41546730	692
ENSMUSG00000045761	protein_coding	Togaram2	ENSMUST00000097284	protein_coding	principal1	17	1	71673261	3503
ENSMUSG00000110118	processed_pseudogene	Gm5609	ENSMUST00000210008	processed_pseudogene		8	1	39455910	1267
ENSMUSG00000108327	lincRNA	Gm44939	ENSMUST00000206939	lincRNA		7	1	127068456	814
ENSMUSG00000029630	protein_coding	Cyp3a25	ENSMUST00000138870	protein_coding		5	-1	146009598	513
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000188330	protein_coding	alternative2	14	1	47663787	3819
ENSMUSG00000117517	unprocessed_pseudogene	Gm50085	ENSMUST00000234123	unprocessed_pseudogene		17	1	25330692	885
ENSMUSG00000029630	protein_coding	Cyp3a25	ENSMUST00000153808	processed_transcript		5	-1	145991643	576
ENSMUSG00000110103	protein_coding	Zscan4-ps1	ENSMUST00000165848	protein_coding	principal1	7	-1	11069691	2015
ENSMUSG00000045761	protein_coding	Togaram2	ENSMUST00000122869	processed_transcript		17	1	71673265	365
ENSMUSG00000076499	TR_V_gene	Trbv31	ENSMUST00000193003	TR_V_gene	principal5	6	-1	41558452	416
ENSMUSG00000021485	protein_coding	Mxd3	ENSMUST00000021941	protein_coding	principal1	13	-1	55329758	1327
ENSMUSG00000045761	protein_coding	Togaram2	ENSMUST00000153445	protein_coding	principal1	17	1	71684805	3301
ENSMUSG00000115896	lincRNA	Gm36677	ENSMUST00000229684	lincRNA		15	1	59618590	381
ENSMUSG00000076499	TR_V_gene	Trbv31	ENSMUST00000103300	TR_V_gene	alternative2	6	-1	41558371	334
ENSMUSG00000114000	lincRNA	Gm48762	ENSMUST00000222557	lincRNA		12	-1	9496908	574
ENSMUSG00000049988	protein_coding	Lrrc25	ENSMUST00000052437	protein_coding	principal1	8	1	70616844	1906
ENSMUSG00000110196	processed_pseudogene	Gm33601	ENSMUST00000210001	processed_pseudogene		7	1	11075671	961
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000191018	protein_coding	alternative2	14	1	47663787	4033
ENSMUSG00000036928	protein_coding	Stag3	ENSMUST00000048028	protein_coding	principal1	5	1	138280526	4211
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000030169	protein_coding	principal1	4	-1	43031710	1874
ENSMUSG00000112496	lincRNA	Gm48764	ENSMUST00000221043	lincRNA		12	-1	9509637	3666
ENSMUSG00000045761	protein_coding	Togaram2	ENSMUST00000144479	protein_coding		17	1	71686701	3087
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000191446	protein_coding	alternative2	14	1	47663787	4021
ENSMUSG00000036928	protein_coding	Stag3	ENSMUST00000162245	protein_coding	principal1	5	1	138280544	4123
ENSMUSG00000069722	protein_coding	Krtap3-3	ENSMUST00000092700	protein_coding	principal1	11	-1	99550865	736
ENSMUSG00000101442	unprocessed_pseudogene	Gm28795	ENSMUST00000185382	unprocessed_pseudogene		Y	-1	66666497	695
ENSMUSG00000094374	processed_pseudogene	Gm5435	ENSMUST00000179295	processed_pseudogene		12	-1	82496537	1150
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000186627	protein_coding	alternative2	14	1	47663787	3840
ENSMUSG00000096688	protein_coding	Mup17	ENSMUST00000107484	protein_coding	principal1	4	-1	61595871	927
ENSMUSG00000061436	protein_coding	Hipk2	ENSMUST00000160962	protein_coding		6	-1	38837224	3972
ENSMUSG00000058301	protein_coding	Upf1	ENSMUST00000215817	protein_coding	alternative2	8	-1	70353211	4518
ENSMUSG00000086039	antisense	Gm12227	ENSMUST00000147847	antisense		11	1	54728677	563
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000125180	processed_transcript		4	-1	43029837	902
ENSMUSG00000052798	protein_coding	Nup107	ENSMUST00000220323	processed_transcript		10	-1	117792651	837
ENSMUSG00000036928	protein_coding	Stag3	ENSMUST00000161691	protein_coding		5	1	138280556	763
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000187262	protein_coding	alternative2	14	1	47663787	3913
ENSMUSG00000021485	protein_coding	Mxd3	ENSMUST00000146181	retained_intron		13	-1	55329733	1742
ENSMUSG00000091668	processed_pseudogene	Gm8358	ENSMUST00000167222	processed_pseudogene		12	1	82543636	555
ENSMUSG00000036928	protein_coding	Stag3	ENSMUST00000161615	processed_transcript		5	1	138299176	574
ENSMUSG00000045761	protein_coding	Togaram2	ENSMUST00000129072	retained_intron		17	1	71713272	3190
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000153203	processed_transcript		4	-1	43029914	667
ENSMUSG00000032839	protein_coding	Trpc1	ENSMUST00000190604	nonsense_mediated_decay		9	-1	95750358	2757
ENSMUSG00000061436	protein_coding	Hipk2	ENSMUST00000162359	protein_coding	alternative1	6	-1	38875923	3867
ENSMUSG00000036928	protein_coding	Stag3	ENSMUST00000160849	protein_coding		5	1	138304438	458
ENSMUSG00000052798	protein_coding	Nup107	ENSMUST00000218810	retained_intron		10	-1	117792698	1233
ENSMUSG00000089779	antisense	Gm15641	ENSMUST00000161407	antisense		17	-1	71717817	670
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000136326	protein_coding		4	-1	43031456	943
ENSMUSG00000032839	protein_coding	Trpc1	ENSMUST00000190497	nonsense_mediated_decay		9	-1	95750358	2859
ENSMUSG00000021485	protein_coding	Mxd3	ENSMUST00000225561	retained_intron		13	-1	55329823	1296
ENSMUSG00000040177	protein_coding	2310057M21Rik	ENSMUST00000059438	protein_coding	principal1	7	-1	131362759	6773
ENSMUSG00000061436	protein_coding	Hipk2	ENSMUST00000160360	protein_coding		6	-1	38875971	3907
ENSMUSG00000097935	processed_pseudogene	Gm3809	ENSMUST00000180973	processed_pseudogene		1	1	186960508	1006
ENSMUSG00000052798	protein_coding	Nup107	ENSMUST00000218777	processed_transcript		10	-1	117790560	643
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000135660	protein_coding		4	-1	43030593	861
ENSMUSG00000032839	protein_coding	Trpc1	ENSMUST00000188141	retained_intron		9	-1	95718614	3108
ENSMUSG00000021485	protein_coding	Mxd3	ENSMUST00000141644	processed_transcript		13	-1	55329352	683
ENSMUSG00000036928	protein_coding	Stag3	ENSMUST00000159189	nonsense_mediated_decay		5	1	138309201	591
ENSMUSG00000032839	protein_coding	Trpc1	ENSMUST00000186235	protein_coding		9	-1	95732209	765
ENSMUSG00000052798	protein_coding	Nup107	ENSMUST00000220203	retained_intron		10	-1	117782011	594
ENSMUSG00000058301	protein_coding	Upf1	ENSMUST00000075666	protein_coding	principal2	8	-1	70353278	4618
ENSMUSG00000032839	protein_coding	Trpc1	ENSMUST00000190205	retained_intron		9	-1	95750375	1338
ENSMUSG00000080978	processed_pseudogene	Gm12297	ENSMUST00000121380	processed_pseudogene		11	1	66563607	979
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000190182	protein_coding	alternative2	14	1	47663787	3984
ENSMUSG00000040177	protein_coding	2310057M21Rik	ENSMUST00000208526	nonsense_mediated_decay		7	-1	131362696	3703
ENSMUSG00000061436	protein_coding	Hipk2	ENSMUST00000159307	processed_transcript		6	-1	38743260	654
ENSMUSG00000104312	antisense	Gm37912	ENSMUST00000191895	antisense		1	-1	186967603	3076
ENSMUSG00000112095	lincRNA	A130077B15Rik	ENSMUST00000219429	lincRNA		10	-1	122569891	2547
ENSMUSG00000029682	protein_coding	Spam1	ENSMUST00000202569	protein_coding	principal1	6	1	24791188	2107
ENSMUSG00000083052	processed_pseudogene	Gm12285	ENSMUST00000117347	processed_pseudogene		11	-1	63241475	233
ENSMUSG00000061436	protein_coding	Hipk2	ENSMUST00000159894	retained_intron		6	-1	38818346	655
ENSMUSG00000040177	protein_coding	2310057M21Rik	ENSMUST00000207117	retained_intron		7	-1	131355742	5386
ENSMUSG00000051497	protein_coding	Kcnj16	ENSMUST00000106636	protein_coding	principal1	11	1	110968033	3623
ENSMUSG00000029682	protein_coding	Spam1	ENSMUST00000202331	protein_coding	principal1	6	1	24791201	2100
ENSMUSG00000039224	protein_coding	D1Pas1	ENSMUST00000045108	protein_coding	principal1	1	1	186967416	3212
ENSMUSG00000061436	protein_coding	Hipk2	ENSMUST00000114855	retained_intron		6	-1	38837311	1723
ENSMUSG00000040177	protein_coding	2310057M21Rik	ENSMUST00000207354	protein_coding		7	-1	131362454	739
ENSMUSG00000029682	protein_coding	Spam1	ENSMUST00000202786	retained_intron		6	1	24791215	1300
ENSMUSG00000052798	protein_coding	Nup107	ENSMUST00000167943	protein_coding	alternative1	10	-1	117792698	3098
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000035495	protein_coding	principal1	8	-1	123318576	4485
ENSMUSG00000040177	protein_coding	2310057M21Rik	ENSMUST00000207305	protein_coding		7	-1	131362387	418
ENSMUSG00000096674	protein_coding	Mup15	ENSMUST00000095049	protein_coding	principal1	4	-1	61439743	925
ENSMUSG00000028657	protein_coding	Ppt1	ENSMUST00000030412	protein_coding	principal1	4	1	122836242	2381
ENSMUSG00000038508	protein_coding	Gdf15	ENSMUST00000003808	protein_coding	principal1	8	-1	70632095	1545
ENSMUSG00000029682	protein_coding	Spam1	ENSMUST00000031693	protein_coding	principal1	6	1	24795824	2013
ENSMUSG00000040177	protein_coding	2310057M21Rik	ENSMUST00000208509	processed_transcript		7	-1	131362710	353
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000123465	processed_transcript		4	-1	43031450	630
ENSMUSG00000051497	protein_coding	Kcnj16	ENSMUST00000106635	protein_coding	principal1	11	1	110997487	3671
ENSMUSG00000115750	lincRNA	Gm49282	ENSMUST00000226620	lincRNA		15	1	36842816	921
ENSMUSG00000100121	antisense	1700025N23Rik	ENSMUST00000186189	antisense		6	-1	39067598	915
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000213090	protein_coding		8	-1	123270296	650
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000030760	protein_coding	principal1	4	-1	141078357	1906
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000138030	protein_coding		4	-1	43031370	638
ENSMUSG00000024173	protein_coding	Tpsab1	ENSMUST00000153118	protein_coding	principal1	17	-1	25345527	1156
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000142781	processed_transcript		4	-1	43030499	520
ENSMUSG00000038508	protein_coding	Gdf15	ENSMUST00000110103	protein_coding	principal1	8	-1	70632456	1380
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000211934	retained_intron		8	-1	123269730	701
ENSMUSG00000028657	protein_coding	Ppt1	ENSMUST00000121870	protein_coding		4	1	122836246	986
ENSMUSG00000024173	protein_coding	Tpsab1	ENSMUST00000146856	protein_coding		17	-1	25345562	1928
ENSMUSG00000051497	protein_coding	Kcnj16	ENSMUST00000125692	protein_coding		11	1	110968064	527
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000143371	processed_transcript		4	-1	43030600	602
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000190535	protein_coding	alternative2	14	1	47663787	4112
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000149178	retained_intron		4	-1	141075057	1008
ENSMUSG00000109730	unprocessed_pseudogene	Gm7151	ENSMUST00000211511	unprocessed_pseudogene		7	1	11082883	954
ENSMUSG00000112343	processed_transcript	Sfta3-ps	ENSMUST00000219680	retained_intron		12	-1	56493324	4774
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000132704	retained_intron		4	-1	141068838	862
ENSMUSG00000051497	protein_coding	Kcnj16	ENSMUST00000150902	protein_coding		11	1	111023860	424
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000127645	processed_transcript		4	-1	43031358	657
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000145621	retained_intron		4	-1	141071839	705
ENSMUSG00000024925	protein_coding	Rnaseh2c	ENSMUST00000025864	protein_coding	principal1	19	1	5601873	1126
ENSMUSG00000096666	protein_coding	Gm20852	ENSMUST00000188011	protein_coding	principal1	Y	-1	66742123	1224
ENSMUSG00000040560	protein_coding	Wdr7	ENSMUST00000072726	protein_coding	principal2	18	1	63708685	7135
ENSMUSG00000096666	protein_coding	Gm20852	ENSMUST00000178761	protein_coding	principal1	Y	-1	66740610	684
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000153721	nonsense_mediated_decay		4	-1	141073705	621
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000135702	processed_transcript		8	-1	123274223	667
ENSMUSG00000028455	protein_coding	Stoml2	ENSMUST00000126026	processed_transcript		4	-1	43031436	724
ENSMUSG00000051497	protein_coding	Kcnj16	ENSMUST00000180023	protein_coding	principal1	11	1	110968033	3701
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000190999	protein_coding	alternative2	14	1	47663787	4031
ENSMUSG00000021486	protein_coding	Prelid1	ENSMUST00000021942	protein_coding	principal1	13	1	55320500	2644
ENSMUSG00000040560	protein_coding	Wdr7	ENSMUST00000235648	protein_coding		18	1	63708695	2067
ENSMUSG00000051497	protein_coding	Kcnj16	ENSMUST00000178798	protein_coding	principal1	11	1	111023860	3678
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000185343	protein_coding	alternative2	14	1	47663787	3846
ENSMUSG00000024925	protein_coding	Rnaseh2c	ENSMUST00000127071	retained_intron		19	1	5601887	869
ENSMUSG00000024925	protein_coding	Rnaseh2c	ENSMUST00000236461	protein_coding		19	1	5601936	707
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000188553	protein_coding	alternative2	14	1	47663787	3918
ENSMUSG00000112343	processed_transcript	Sfta3-ps	ENSMUST00000218376	lincRNA		12	-1	56529260	2128
ENSMUSG00000040560	protein_coding	Wdr7	ENSMUST00000236956	nonsense_mediated_decay		18	1	63708713	3302
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000185940	protein_coding	alternative2	14	1	47663787	3869
ENSMUSG00000021486	protein_coding	Prelid1	ENSMUST00000224220	retained_intron		13	1	55322019	1204
ENSMUSG00000025036	protein_coding	Sfxn2	ENSMUST00000237310	retained_intron		19	1	46573365	5253
ENSMUSG00000024925	protein_coding	Rnaseh2c	ENSMUST00000155639	protein_coding		19	1	5601975	771
ENSMUSG00000040560	protein_coding	Wdr7	ENSMUST00000236879	protein_coding	alternative1	18	1	63708715	6987
ENSMUSG00000112343	processed_transcript	Sfta3-ps	ENSMUST00000218497	retained_intron		12	-1	56505685	2653
ENSMUSG00000048070	protein_coding	Pirt	ENSMUST00000123434	protein_coding	principal1	11	1	66911981	4200
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000189533	protein_coding	alternative2	14	1	47663787	3941
ENSMUSG00000112343	processed_transcript	Sfta3-ps	ENSMUST00000220379	lincRNA		12	-1	56529427	2187
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000126834	processed_transcript		8	-1	123278054	918
ENSMUSG00000040560	protein_coding	Wdr7	ENSMUST00000238193	retained_intron		18	1	63739064	3523
ENSMUSG00000024925	protein_coding	Rnaseh2c	ENSMUST00000136226	protein_coding		19	1	5602235	393
ENSMUSG00000112343	processed_transcript	Sfta3-ps	ENSMUST00000219423	retained_intron		12	-1	56512044	744
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000187039	protein_coding	alternative2	14	1	47663787	3875
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000155510	processed_transcript		8	-1	123276598	483
ENSMUSG00000099360	bidirectional_promoter_lncRNA	1700022H16Rik	ENSMUST00000188935	bidirectional_promoter_lncRNA		12	-1	9570585	476
ENSMUSG00000040560	protein_coding	Wdr7	ENSMUST00000235428	protein_coding		18	1	63777972	535
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000152915	processed_transcript		4	-1	141078357	928
ENSMUSG00000112468	TEC	Gm47720	ENSMUST00000219957	TEC		12	-1	56500828	2141
ENSMUSG00000117977	antisense	Gm50106	ENSMUST00000236836	antisense		18	-1	63763217	807
ENSMUSG00000024925	protein_coding	Rnaseh2c	ENSMUST00000133953	retained_intron		19	1	5602410	271
ENSMUSG00000028657	protein_coding	Ppt1	ENSMUST00000120157	nonsense_mediated_decay		4	1	122836250	2573
ENSMUSG00000048387	protein_coding	Osr1	ENSMUST00000217975	protein_coding		12	1	9570116	572
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000191511	protein_coding	alternative2	14	1	47663787	3962
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000155279	processed_transcript		8	-1	123281287	729
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000150330	processed_transcript		4	-1	141078357	809
ENSMUSG00000034789	protein_coding	Rab24	ENSMUST00000225289	retained_intron		13	-1	55321946	1806
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000122933	retained_intron		4	-1	141071773	275
ENSMUSG00000030801	protein_coding	Kat8	ENSMUST00000033070	protein_coding	principal1	7	1	127912516	1579
ENSMUSG00000072834	antisense	Gm12298	ENSMUST00000126999	antisense		11	-1	66947086	731
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000146687	retained_intron		8	-1	123282667	668
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000130351	retained_intron		4	-1	141078294	733
ENSMUSG00000028657	protein_coding	Ppt1	ENSMUST00000097902	protein_coding		4	1	122836254	1191
ENSMUSG00000028923	protein_coding	Necap2	ENSMUST00000144813	retained_intron		4	-1	141078357	742
ENSMUSG00000052214	protein_coding	Opa3	ENSMUST00000063976	protein_coding	principal2	7	1	19228334	3366
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000189101	protein_coding	alternative2	14	1	47663787	3761
ENSMUSG00000085683	protein_coding	Tmem238l	ENSMUST00000211300	protein_coding	principal1	11	1	66956638	930
ENSMUSG00000030801	protein_coding	Kat8	ENSMUST00000205357	protein_coding		7	1	127914155	723
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000186761	protein_coding	alternative2	14	1	47663787	3902
ENSMUSG00000034789	protein_coding	Rab24	ENSMUST00000224685	protein_coding		13	-1	55320536	454
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000237072	protein_coding		19	-1	5603966	839
ENSMUSG00000085683	protein_coding	Tmem238l	ENSMUST00000150220	protein_coding		11	1	66956653	788
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000190164	retained_intron		14	1	47700641	463
ENSMUSG00000048775	protein_coding	Serpinb13	ENSMUST00000027564	protein_coding	principal1	1	1	106980984	1607
ENSMUSG00000052214	protein_coding	Opa3	ENSMUST00000206335	retained_intron		7	1	19228383	730
ENSMUSG00000030801	protein_coding	Kat8	ENSMUST00000206364	retained_intron		7	1	127919788	660
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000186700	retained_intron		14	1	47705655	1306
ENSMUSG00000024168	protein_coding	Tmem204	ENSMUST00000024984	protein_coding	principal1	17	-1	25081181	1846
ENSMUSG00000085683	protein_coding	Tmem238l	ENSMUST00000127166	processed_transcript		11	1	66957894	1073
ENSMUSG00000017002	protein_coding	Slpi	ENSMUST00000109367	protein_coding	principal2	2	-1	164356507	876
ENSMUSG00000052298	protein_coding	Cdc42se2	ENSMUST00000064104	protein_coding	principal1	11	-1	54787675	3069
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000188049	retained_intron		14	1	47714677	450
ENSMUSG00000048775	protein_coding	Serpinb13	ENSMUST00000136766	nonsense_mediated_decay		1	1	106980994	1247
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000188263	retained_intron		14	1	47724768	518
ENSMUSG00000052214	protein_coding	Opa3	ENSMUST00000161711	protein_coding	alternative2	7	1	19228383	1390
ENSMUSG00000048387	protein_coding	Osr1	ENSMUST00000057021	protein_coding	principal1	12	1	9574441	2012
ENSMUSG00000024168	protein_coding	Tmem204	ENSMUST00000232699	processed_transcript		17	-1	25081190	1738
ENSMUSG00000085926	processed_transcript	Gm12299	ENSMUST00000138819	processed_transcript		11	1	67002086	2327
ENSMUSG00000024168	protein_coding	Tmem204	ENSMUST00000233505	processed_transcript		17	-1	25083591	1275
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000190857	retained_intron		14	1	47729659	4100
ENSMUSG00000100182	lincRNA	1810006J02Rik	ENSMUST00000191060	lincRNA		1	1	98131456	523
ENSMUSG00000052298	protein_coding	Cdc42se2	ENSMUST00000153209	protein_coding		11	-1	54787646	738
ENSMUSG00000038524	protein_coding	Fchsd1	ENSMUST00000165643	retained_intron		18	-1	37960471	2918
ENSMUSG00000072770	protein_coding	Acrbp	ENSMUST00000112414	protein_coding	alternative2	6	1	125049689	1498
ENSMUSG00000100182	lincRNA	1810006J02Rik	ENSMUST00000186473	lincRNA		1	1	98131467	1687
ENSMUSG00000110348	processed_pseudogene	Gm4157	ENSMUST00000211647	processed_pseudogene		7	-1	11108355	679
ENSMUSG00000052298	protein_coding	Cdc42se2	ENSMUST00000136059	processed_transcript		11	-1	54787641	801
ENSMUSG00000017002	protein_coding	Slpi	ENSMUST00000165980	protein_coding	alternative2	2	-1	164356067	488
ENSMUSG00000021843	protein_coding	Ktn1	ENSMUST00000022391	protein_coding	principal3	14	1	47663756	4484
ENSMUSG00000109889	processed_pseudogene	Gm3774	ENSMUST00000209773	processed_pseudogene		7	-1	11113388	435
ENSMUSG00000024168	protein_coding	Tmem204	ENSMUST00000153745	protein_coding		17	-1	25078224	902
ENSMUSG00000017002	protein_coding	Slpi	ENSMUST00000167427	protein_coding		2	-1	164389095	601
ENSMUSG00000049493	protein_coding	Pls1	ENSMUST00000093800	protein_coding	principal1	9	-1	95845286	3704
ENSMUSG00000072770	protein_coding	Acrbp	ENSMUST00000112413	protein_coding		6	1	125049947	672
ENSMUSG00000052298	protein_coding	Cdc42se2	ENSMUST00000135903	processed_transcript		11	-1	54787625	560
ENSMUSG00000100711	lincRNA	Gm29461	ENSMUST00000189232	lincRNA		1	1	98173648	4176
ENSMUSG00000052298	protein_coding	Cdc42se2	ENSMUST00000123424	processed_transcript		11	-1	54760339	401
ENSMUSG00000096269	processed_pseudogene	Rpl31-ps21	ENSMUST00000181182	processed_pseudogene		5	-1	21119522	374
ENSMUSG00000082503	processed_pseudogene	Gm12229	ENSMUST00000120487	processed_pseudogene		11	-1	54746824	468
ENSMUSG00000049493	protein_coding	Pls1	ENSMUST00000119760	protein_coding		9	-1	95815406	612
ENSMUSG00000049493	protein_coding	Pls1	ENSMUST00000135816	processed_transcript		9	-1	95845311	371
ENSMUSG00000025036	protein_coding	Sfxn2	ENSMUST00000236845	nonsense_mediated_decay		19	1	46573365	1655
ENSMUSG00000034789	protein_coding	Rab24	ENSMUST00000035242	protein_coding	principal1	13	-1	55321945	1168
ENSMUSG00000107134	TEC	Gm42528	ENSMUST00000200697	TEC		5	-1	39610344	3418
ENSMUSG00000100373	lincRNA	Gm29003	ENSMUST00000187769	lincRNA		Y	1	66756992	194
ENSMUSG00000004849	protein_coding	Ap1s1	ENSMUST00000111080	protein_coding	principal1	5	-1	137046135	1353
ENSMUSG00000114131	antisense	Gm47460	ENSMUST00000221126	antisense		13	1	45749572	679
ENSMUSG00000100373	lincRNA	Gm29003	ENSMUST00000190434	lincRNA		Y	1	66756996	453
ENSMUSG00000059434	protein_coding	Gckr	ENSMUST00000201166	protein_coding	alternative2	5	1	31297443	2272
ENSMUSG00000021709	protein_coding	Erbin	ENSMUST00000053927	protein_coding	alternative2	13	-1	103889292	6103
ENSMUSG00000075265	antisense	Tnk2os	ENSMUST00000141256	antisense		16	-1	32668197	1392
ENSMUSG00000004849	protein_coding	Ap1s1	ENSMUST00000154183	retained_intron		5	-1	137037650	683
ENSMUSG00000080862	transcribed_processed_pseudogene	Gm14523	ENSMUST00000117260	transcribed_processed_pseudogene		X	-1	23365063	558
ENSMUSG00000034789	protein_coding	Rab24	ENSMUST00000224936	retained_intron		13	-1	55321931	1592
ENSMUSG00000053414	protein_coding	Hunk	ENSMUST00000065856	protein_coding	principal1	16	1	90386013	5393
ENSMUSG00000097558	bidirectional_promoter_lncRNA	Gm26902	ENSMUST00000181777	bidirectional_promoter_lncRNA		19	1	34474808	1395
ENSMUSG00000110066	processed_pseudogene	Gm38430	ENSMUST00000209888	processed_pseudogene		7	-1	11150496	1240
ENSMUSG00000034789	protein_coding	Rab24	ENSMUST00000223672	retained_intron		13	-1	55321779	730
ENSMUSG00000097558	bidirectional_promoter_lncRNA	Gm26902	ENSMUST00000181307	bidirectional_promoter_lncRNA		19	1	34474833	3100
ENSMUSG00000004849	protein_coding	Ap1s1	ENSMUST00000150603	protein_coding		5	-1	137045795	748
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000155488	retained_intron		8	-1	123318560	2994
ENSMUSG00000106116	processed_pseudogene	Gm18830	ENSMUST00000199036	processed_pseudogene		5	1	21124017	1396
ENSMUSG00000053414	protein_coding	Hunk	ENSMUST00000231719	protein_coding		16	1	90400544	3068
ENSMUSG00000105685	processed_pseudogene	Gm43315	ENSMUST00000198120	processed_pseudogene		5	1	56157338	313
ENSMUSG00000004849	protein_coding	Ap1s1	ENSMUST00000144303	protein_coding		5	-1	137046042	483
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000127904	protein_coding		8	-1	123313362	2355
ENSMUSG00000050370	protein_coding	Ch25h	ENSMUST00000050562	protein_coding	principal1	19	-1	34475164	1387
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000133950	retained_intron		8	-1	123291861	716
ENSMUSG00000053414	protein_coding	Hunk	ENSMUST00000231603	retained_intron		16	1	90461897	3446
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000212953	processed_transcript		8	-1	123304879	709
ENSMUSG00000004849	protein_coding	Ap1s1	ENSMUST00000129356	protein_coding		5	-1	137045407	602
ENSMUSG00000072770	protein_coding	Acrbp	ENSMUST00000088294	protein_coding	principal3	6	1	125049959	1883
ENSMUSG00000106326	transcribed_processed_pseudogene	Gm42977	ENSMUST00000197497	transcribed_processed_pseudogene		5	1	56414210	144
ENSMUSG00000107223	processed_pseudogene	Gm18327	ENSMUST00000202426	processed_pseudogene		6	1	24837294	830
ENSMUSG00000028101	protein_coding	Pias3	ENSMUST00000107076	protein_coding	principal3	3	1	96696384	2858
ENSMUSG00000104739	processed_pseudogene	Gm3283	ENSMUST00000199319	processed_pseudogene		5	1	57229266	1350
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000118395	protein_coding		8	-1	123318560	3274
ENSMUSG00000106104	TEC	Gm42660	ENSMUST00000197733	TEC		5	1	21131076	947
ENSMUSG00000104560	processed_pseudogene	Gm8115	ENSMUST00000197137	processed_pseudogene		5	1	57261272	736
ENSMUSG00000105463	IG_V_pseudogene	Igkv2-113	ENSMUST00000196138	IG_V_pseudogene		6	1	68178801	362
ENSMUSG00000029725	protein_coding	Ppp1r35	ENSMUST00000126126	protein_coding		5	1	137778849	430
ENSMUSG00000105291	processed_pseudogene	Gm18901	ENSMUST00000197840	processed_pseudogene		5	1	57355835	1444
ENSMUSG00000072770	protein_coding	Acrbp	ENSMUST00000032481	protein_coding		6	1	125049967	584
ENSMUSG00000032815	protein_coding	Fanca	ENSMUST00000150318	retained_intron		8	-1	123318560	895
ENSMUSG00000069729	protein_coding	Arid1b	ENSMUST00000092723	protein_coding	alternative2	17	1	4994939	7150
ENSMUSG00000072770	protein_coding	Acrbp	ENSMUST00000112412	processed_transcript		6	1	125051854	741
ENSMUSG00000097895	processed_pseudogene	Gm18709	ENSMUST00000180564	processed_pseudogene		8	1	120727263	489
ENSMUSG00000105693	TEC	Gm43706	ENSMUST00000198767	TEC		5	1	57451626	2652
ENSMUSG00000027942	protein_coding	4933434E20Rik	ENSMUST00000159064	protein_coding	principal1	3	1	90051636	1344
ENSMUSG00000028101	protein_coding	Pias3	ENSMUST00000162934	nonsense_mediated_decay		3	1	96696442	2281
ENSMUSG00000038580	protein_coding	Sct	ENSMUST00000210928	retained_intron		7	-1	141279123	617
ENSMUSG00000072770	protein_coding	Acrbp	ENSMUST00000124159	retained_intron		6	1	125053802	695
ENSMUSG00000104892	processed_pseudogene	Gm6615	ENSMUST00000199426	processed_pseudogene		5	1	57460160	631
ENSMUSG00000072770	protein_coding	Acrbp	ENSMUST00000136100	retained_intron		6	1	125062189	638
ENSMUSG00000028101	protein_coding	Pias3	ENSMUST00000162778	protein_coding		3	1	96697076	439
ENSMUSG00000051022	protein_coding	Hs3st1	ENSMUST00000117944	protein_coding	principal1	5	-1	39755475	1686
ENSMUSG00000044716	protein_coding	Dok7	ENSMUST00000101298	protein_coding		5	1	35056766	2443
ENSMUSG00000069729	protein_coding	Arid1b	ENSMUST00000232180	protein_coding	alternative2	17	1	4994939	7309
ENSMUSG00000029725	protein_coding	Ppp1r35	ENSMUST00000031739	protein_coding	principal1	5	1	137778904	956
ENSMUSG00000022650	protein_coding	Retnlb	ENSMUST00000023328	protein_coding	principal1	16	1	48816856	696
ENSMUSG00000086526	lincRNA	Gm12762	ENSMUST00000140881	lincRNA		7	-1	34234102	483
ENSMUSG00000059434	protein_coding	Gckr	ENSMUST00000202909	retained_intron		5	1	31297554	4014
ENSMUSG00000025036	protein_coding	Sfxn2	ENSMUST00000026011	protein_coding	principal1	19	1	46573367	3205
ENSMUSG00000029725	protein_coding	Ppp1r35	ENSMUST00000198929	protein_coding		5	1	137779437	362
ENSMUSG00000046748	protein_coding	Tmem45a2	ENSMUST00000067173	protein_coding	principal1	16	-1	57071352	3073
ENSMUSG00000029725	protein_coding	Ppp1r35	ENSMUST00000152298	retained_intron		5	1	137779544	476
ENSMUSG00000069729	protein_coding	Arid1b	ENSMUST00000115799	protein_coding	alternative2	17	1	4996421	9888
ENSMUSG00000069721	protein_coding	Krtap3-2	ENSMUST00000092699	protein_coding	principal1	11	-1	99556853	1031
ENSMUSG00000059434	protein_coding	Gckr	ENSMUST00000072228	protein_coding	principal2	5	1	31297581	2014
ENSMUSG00000027942	protein_coding	4933434E20Rik	ENSMUST00000160640	protein_coding	principal1	3	1	90052814	2510
ENSMUSG00000097608	processed_pseudogene	Gm7952	ENSMUST00000180540	processed_pseudogene		1	1	98263523	984
ENSMUSG00000051022	protein_coding	Hs3st1	ENSMUST00000053116	protein_coding	principal1	5	-1	39644634	1684
ENSMUSG00000025747	protein_coding	Tyms	ENSMUST00000141630	nonsense_mediated_decay		5	-1	30073581	3884
ENSMUSG00000048897	protein_coding	Zfp710	ENSMUST00000164056	protein_coding	principal4	7	1	80024814	5871
ENSMUSG00000108037	processed_transcript	Gm44597	ENSMUST00000203287	retained_intron		6	1	125039816	3516
ENSMUSG00000099634	processed_pseudogene	Gm29462	ENSMUST00000191458	processed_pseudogene		1	1	98267151	288
ENSMUSG00000025036	protein_coding	Sfxn2	ENSMUST00000238124	processed_transcript		19	1	46582903	657
ENSMUSG00000059434	protein_coding	Gckr	ENSMUST00000201675	protein_coding		5	1	31297612	372
ENSMUSG00000025036	protein_coding	Sfxn2	ENSMUST00000237001	processed_transcript		19	1	46591121	576
ENSMUSG00000044716	protein_coding	Dok7	ENSMUST00000114270	protein_coding	principal1	5	1	35056862	2779
ENSMUSG00000069729	protein_coding	Arid1b	ENSMUST00000156775	retained_intron		17	1	4996429	872
ENSMUSG00000046748	protein_coding	Tmem45a2	ENSMUST00000226147	retained_intron		16	-1	57071372	4610
ENSMUSG00000061684	processed_pseudogene	Rpl21-ps8	ENSMUST00000130005	processed_pseudogene		18	-1	82524021	483
ENSMUSG00000051022	protein_coding	Hs3st1	ENSMUST00000137142	protein_coding		5	-1	39645246	763
ENSMUSG00000108037	processed_transcript	Gm44597	ENSMUST00000140883	retained_intron		6	1	125039845	3181
ENSMUSG00000059434	protein_coding	Gckr	ENSMUST00000202312	retained_intron		5	1	31298701	604
ENSMUSG00000081600	processed_pseudogene	Gm12286	ENSMUST00000119246	processed_pseudogene		11	-1	63313311	1002
ENSMUSG00000044716	protein_coding	Dok7	ENSMUST00000133381	protein_coding		5	1	35056888	390
ENSMUSG00000051022	protein_coding	Hs3st1	ENSMUST00000152057	protein_coding		5	-1	39644597	711
ENSMUSG00000031972	protein_coding	Acta1	ENSMUST00000034453	protein_coding	principal1	8	-1	123894751	1446
ENSMUSG00000027942	protein_coding	4933434E20Rik	ENSMUST00000159202	processed_transcript		3	1	90052829	614
ENSMUSG00000046748	protein_coding	Tmem45a2	ENSMUST00000227043	protein_coding	principal1	16	-1	57071352	1447
ENSMUSG00000059434	protein_coding	Gckr	ENSMUST00000202456	retained_intron		5	1	31299506	947
ENSMUSG00000069729	protein_coding	Arid1b	ENSMUST00000146703	retained_intron		17	1	5040578	1083
ENSMUSG00000105163	processed_pseudogene	Gm4873	ENSMUST00000199402	processed_pseudogene		6	-1	68215253	1203
ENSMUSG00000059434	protein_coding	Gckr	ENSMUST00000202242	retained_intron		5	1	31326231	632
ENSMUSG00000048897	protein_coding	Zfp710	ENSMUST00000166250	protein_coding	alternative2	7	1	80024834	3606
ENSMUSG00000078618	lincRNA	4930456L15Rik	ENSMUST00000145577	lincRNA		4	1	103290959	1185
ENSMUSG00000031972	protein_coding	Acta1	ENSMUST00000212584	protein_coding		8	-1	123894751	616
ENSMUSG00000069729	protein_coding	Arid1b	ENSMUST00000115797	protein_coding	principal2	17	1	4995074	11325
ENSMUSG00000108668	processed_transcript	Gm32816	ENSMUST00000206497	lincRNA		7	1	128462068	496
ENSMUSG00000110601	processed_pseudogene	Gm45834	ENSMUST00000212445	processed_pseudogene		8	-1	120597563	454
ENSMUSG00000108668	processed_transcript	Gm32816	ENSMUST00000206070	retained_intron		7	1	128474218	1353
ENSMUSG00000028101	protein_coding	Pias3	ENSMUST00000064900	protein_coding	alternative1	3	1	96697083	2931
ENSMUSG00000085113	lincRNA	B130011K05Rik	ENSMUST00000151765	lincRNA		11	1	63413169	3270
ENSMUSG00000076518	IG_V_gene	Igkv2-112	ENSMUST00000103318	IG_V_gene	principal5	6	1	68219981	361
ENSMUSG00000081783	processed_pseudogene	Gm15599	ENSMUST00000122283	processed_pseudogene		17	-1	5112110	1345
ENSMUSG00000076518	IG_V_gene	Igkv2-112	ENSMUST00000103319	IG_V_gene	alternative2	6	1	68219981	358
ENSMUSG00000086261	processed_pseudogene	Gm3765	ENSMUST00000130985	processed_pseudogene		7	-1	107200189	1447
ENSMUSG00000084228	unprocessed_pseudogene	Gm8080	ENSMUST00000122046	unprocessed_pseudogene		1	-1	107025325	1155
ENSMUSG00000114785	processed_pseudogene	Gm41115	ENSMUST00000223843	processed_pseudogene		14	1	26926455	308
ENSMUSG00000108626	lincRNA	Gm40457	ENSMUST00000205319	lincRNA		7	-1	128500187	1174
ENSMUSG00000072676	protein_coding	Tmem254a	ENSMUST00000185006	protein_coding	principal1	14	-1	25927672	2147
ENSMUSG00000073894	protein_coding	Rbmxl2	ENSMUST00000098135	protein_coding	principal1	7	1	107209445	1472
ENSMUSG00000095771	IG_V_gene	Igkv14-111	ENSMUST00000103320	IG_V_gene	principal1	6	1	68256389	368
ENSMUSG00000095066	protein_coding	Defa20	ENSMUST00000084042	protein_coding	principal1	8	1	21509258	425
ENSMUSG00000048897	protein_coding	Zfp710	ENSMUST00000049680	protein_coding	principal4	7	1	80026037	4721
ENSMUSG00000027942	protein_coding	4933434E20Rik	ENSMUST00000029552	protein_coding		3	1	90052837	1080
ENSMUSG00000038580	protein_coding	Sct	ENSMUST00000046156	protein_coding	alternative2	7	-1	141279133	534
ENSMUSG00000072676	protein_coding	Tmem254a	ENSMUST00000100811	protein_coding		14	-1	25927250	1108
ENSMUSG00000083261	processed_pseudogene	Gm7816	ENSMUST00000119884	processed_pseudogene		5	1	39798214	1194
ENSMUSG00000105637	TEC	Gm42480	ENSMUST00000198434	TEC		5	1	57793159	2595
ENSMUSG00000027942	protein_coding	4933434E20Rik	ENSMUST00000162114	protein_coding		3	1	90052842	1411
ENSMUSG00000044716	protein_coding	Dok7	ENSMUST00000050709	protein_coding		5	1	35057077	2498
ENSMUSG00000105049	TEC	Gm42486	ENSMUST00000200369	TEC		5	1	58121439	3486
ENSMUSG00000048897	protein_coding	Zfp710	ENSMUST00000206039	protein_coding	alternative2	7	1	80026387	2194
ENSMUSG00000027942	protein_coding	4933434E20Rik	ENSMUST00000162595	retained_intron		3	1	90052854	453
ENSMUSG00000103959	TEC	Gm37720	ENSMUST00000195497	TEC		5	1	57984212	1241
ENSMUSG00000072676	protein_coding	Tmem254a	ENSMUST00000100813	nonsense_mediated_decay		14	-1	25927643	776
ENSMUSG00000039706	protein_coding	Ldb2	ENSMUST00000199534	protein_coding		5	-1	44799619	2541
ENSMUSG00000105940	TEC	Gm42635	ENSMUST00000200266	TEC		5	1	57724393	2571
ENSMUSG00000044716	protein_coding	Dok7	ENSMUST00000155097	retained_intron		5	1	35074958	2519
ENSMUSG00000000253	protein_coding	Gmpr	ENSMUST00000000260	protein_coding	principal1	13	1	45507444	1580
ENSMUSG00000072676	protein_coding	Tmem254a	ENSMUST00000184129	retained_intron		14	-1	25925788	418
ENSMUSG00000104564	transcribed_processed_pseudogene	Gm17977	ENSMUST00000198743	transcribed_processed_pseudogene		5	1	57899734	574
ENSMUSG00000093861	IG_V_gene	Igkv1-110	ENSMUST00000103321	IG_V_gene	principal1	6	1	68270485	401
ENSMUSG00000027942	protein_coding	4933434E20Rik	ENSMUST00000068798	protein_coding		3	1	90052871	1500
ENSMUSG00000094818	protein_coding	Defa32	ENSMUST00000084041	protein_coding	principal1	8	1	21529032	425
ENSMUSG00000038580	protein_coding	Sct	ENSMUST00000211667	protein_coding	alternative2	7	-1	141279131	506
ENSMUSG00000048897	protein_coding	Zfp710	ENSMUST00000206104	protein_coding		7	1	80027814	393
ENSMUSG00000000253	protein_coding	Gmpr	ENSMUST00000128873	protein_coding		13	1	45513840	871
ENSMUSG00000104821	TEC	Gm42481	ENSMUST00000196822	TEC		5	1	57778873	2178
ENSMUSG00000006517	protein_coding	Mvd	ENSMUST00000211883	nonsense_mediated_decay		8	-1	122443396	1833
ENSMUSG00000105431	TEC	Gm42640	ENSMUST00000199792	TEC		5	1	57961594	1195
ENSMUSG00000027942	protein_coding	4933434E20Rik	ENSMUST00000161918	nonsense_mediated_decay		3	1	90052871	1385
ENSMUSG00000000253	protein_coding	Gmpr	ENSMUST00000129176	retained_intron		13	1	45538809	331
ENSMUSG00000108655	antisense	Gm44949	ENSMUST00000206423	antisense		7	-1	80090431	1450
ENSMUSG00000038580	protein_coding	Sct	ENSMUST00000167790	protein_coding	principal3	7	-1	141279131	507
ENSMUSG00000000253	protein_coding	Gmpr	ENSMUST00000222227	processed_transcript		13	1	45546153	682
ENSMUSG00000027942	protein_coding	4933434E20Rik	ENSMUST00000161874	retained_intron		3	1	90053595	480
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000097999	protein_coding	principal1	7	-1	132813528	5465
ENSMUSG00000039706	protein_coding	Ldb2	ENSMUST00000070748	protein_coding	principal3	5	-1	44799639	2418
ENSMUSG00000113390	lincRNA	Gm32635	ENSMUST00000221493	lincRNA		12	-1	106098971	1162
ENSMUSG00000113987	antisense	4930453C13Rik	ENSMUST00000222376	antisense		13	1	45936040	765
ENSMUSG00000027942	protein_coding	4933434E20Rik	ENSMUST00000162390	retained_intron		3	1	90058645	815
ENSMUSG00000086789	antisense	Lyrm7os	ENSMUST00000154044	antisense		11	1	54819919	928
ENSMUSG00000058056	protein_coding	Palld	ENSMUST00000121200	protein_coding		8	-1	61591142	4193
ENSMUSG00000028101	protein_coding	Pias3	ENSMUST00000107077	protein_coding		3	1	96697117	2695
ENSMUSG00000061100	protein_coding	Retnla	ENSMUST00000238847	protein_coding	alternative2	16	1	48842551	599
ENSMUSG00000114149	lincRNA	Gm47646	ENSMUST00000223462	lincRNA		12	-1	106145400	3534
ENSMUSG00000105552	lincRNA	Gm19710	ENSMUST00000200257	lincRNA		3	1	89998760	640
ENSMUSG00000097216	processed_transcript	4932441J04Rik	ENSMUST00000180708	antisense		5	-1	57717920	729
ENSMUSG00000091280	lincRNA	Gm17032	ENSMUST00000164367	lincRNA		12	1	106327368	338
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000065371	protein_coding	principal1	7	-1	132786919	5052
ENSMUSG00000105552	lincRNA	Gm19710	ENSMUST00000200320	lincRNA		3	1	90001115	493
ENSMUSG00000028101	protein_coding	Pias3	ENSMUST00000176288	retained_intron		3	1	96697133	627
ENSMUSG00000097216	processed_transcript	4932441J04Rik	ENSMUST00000193156	retained_intron		5	-1	57720201	4062
ENSMUSG00000061100	protein_coding	Retnla	ENSMUST00000023329	protein_coding	principal2	16	1	48842552	598
ENSMUSG00000106337	TEC	Gm42478	ENSMUST00000199252	TEC		5	1	57929750	1467
ENSMUSG00000090798	unprocessed_pseudogene	Gm8046	ENSMUST00000172151	unprocessed_pseudogene		14	1	43635674	616
ENSMUSG00000039706	protein_coding	Ldb2	ENSMUST00000199256	protein_coding		5	-1	44799680	2596
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000097998	protein_coding		7	-1	132813886	4341
ENSMUSG00000092066	lincRNA	1700121N20Rik	ENSMUST00000167922	lincRNA		12	-1	106447666	1027
ENSMUSG00000078132	protein_coding	Gm11939	ENSMUST00000104931	protein_coding	principal1	11	-1	99559466	300
ENSMUSG00000092571	unprocessed_pseudogene	Gm4134	ENSMUST00000173244	unprocessed_pseudogene		17	-1	33864228	563
ENSMUSG00000001496	protein_coding	Nkx2-1	ENSMUST00000178477	protein_coding	principal1	12	-1	56535106	2242
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000106169	protein_coding	principal1	7	-1	132802764	4536
ENSMUSG00000039706	protein_coding	Ldb2	ENSMUST00000199261	protein_coding	alternative1	5	-1	44799602	2367
ENSMUSG00000028101	protein_coding	Pias3	ENSMUST00000176302	nonsense_mediated_decay		3	1	96697194	744
ENSMUSG00000025747	protein_coding	Tyms	ENSMUST00000026846	protein_coding	principal1	5	-1	30073617	3163
ENSMUSG00000090821	unprocessed_pseudogene	Gm8161	ENSMUST00000168739	unprocessed_pseudogene		14	-1	43655027	481
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000106168	protein_coding		7	-1	132776916	3630
ENSMUSG00000101867	antisense	C78334	ENSMUST00000190970	antisense		9	-1	96019405	456
ENSMUSG00000022337	protein_coding	Emc2	ENSMUST00000022962	protein_coding	principal1	15	1	43477229	1231
ENSMUSG00000039706	protein_coding	Ldb2	ENSMUST00000199471	processed_transcript		5	-1	44593879	608
ENSMUSG00000093968	protein_coding	Gm8165	ENSMUST00000095981	protein_coding	principal1	14	-1	43677199	1404
ENSMUSG00000027272	protein_coding	Ubr1	ENSMUST00000028728	protein_coding	principal1	2	-1	120970715	7768
ENSMUSG00000001496	protein_coding	Nkx2-1	ENSMUST00000001536	protein_coding	principal1	12	-1	56536908	2809
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000106166	protein_coding		7	-1	132786935	1270
ENSMUSG00000115050	lincRNA	Gm21154	ENSMUST00000228384	lincRNA		14	1	43646251	1232
ENSMUSG00000039706	protein_coding	Ldb2	ENSMUST00000198356	processed_transcript		5	-1	44535097	780
ENSMUSG00000101867	antisense	C78334	ENSMUST00000186632	antisense		9	-1	96024740	600
ENSMUSG00000029108	protein_coding	Pcdh7	ENSMUST00000191837	protein_coding	alternative1	5	1	57717967	8785
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000106165	protein_coding		7	-1	132813095	1232
ENSMUSG00000022337	protein_coding	Emc2	ENSMUST00000228864	retained_intron		15	1	43477241	1548
ENSMUSG00000028101	protein_coding	Pias3	ENSMUST00000162707	retained_intron		3	1	96700478	795
ENSMUSG00000039706	protein_coding	Ldb2	ENSMUST00000198894	retained_intron		5	-1	44799652	635
ENSMUSG00000022337	protein_coding	Emc2	ENSMUST00000227055	retained_intron		15	1	43494910	1272
ENSMUSG00000105648	TEC	Gm43505	ENSMUST00000200579	TEC		5	1	44585063	139
ENSMUSG00000028101	protein_coding	Pias3	ENSMUST00000161296	retained_intron		3	1	96701353	770
ENSMUSG00000006517	protein_coding	Mvd	ENSMUST00000006692	protein_coding	principal1	8	-1	122443422	1756
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000134946	protein_coding		7	-1	132813729	516
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000140865	protein_coding		7	-1	132807380	342
ENSMUSG00000104851	TEC	E030026E10Rik	ENSMUST00000200395	TEC		5	-1	44738553	2217
ENSMUSG00000036782	protein_coding	Klhl13	ENSMUST00000115313	protein_coding		X	-1	23365082	3251
ENSMUSG00000028101	protein_coding	Pias3	ENSMUST00000162156	protein_coding		3	1	96704166	812
ENSMUSG00000105861	TEC	Gm43508	ENSMUST00000197251	TEC		5	-1	44627701	3783
ENSMUSG00000102737	TEC	1700016A09Rik	ENSMUST00000192004	TEC		8	-1	120537726	835
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000146460	processed_transcript		7	-1	132780323	589
ENSMUSG00000092515	lincRNA	C87198	ENSMUST00000173553	lincRNA		12	1	56591059	1045
ENSMUSG00000025747	protein_coding	Tyms	ENSMUST00000154751	retained_intron		5	-1	30073614	2723
ENSMUSG00000106603	TEC	Gm43509	ENSMUST00000196551	TEC		5	-1	44753757	2594
ENSMUSG00000074052	bidirectional_promoter_lncRNA	BC048644	ENSMUST00000181944	bidirectional_promoter_lncRNA		8	1	121907833	1992
ENSMUSG00000030956	protein_coding	Fam53b	ENSMUST00000148303	processed_transcript		7	-1	132802750	347
ENSMUSG00000027272	protein_coding	Ubr1	ENSMUST00000133408	retained_intron		2	-1	120970613	1480
ENSMUSG00000028100	protein_coding	Nudt17	ENSMUST00000200387	protein_coding		3	-1	96708547	2108
ENSMUSG00000092515	lincRNA	C87198	ENSMUST00000182261	lincRNA		12	1	56591069	557
ENSMUSG00000081258	processed_pseudogene	Gm14013	ENSMUST00000119006	processed_pseudogene		2	1	106265307	270
ENSMUSG00000105224	sense_intronic	Gm3364	ENSMUST00000196016	sense_intronic		5	-1	44706890	1217
ENSMUSG00000025747	protein_coding	Tyms	ENSMUST00000196095	nonsense_mediated_decay		5	-1	30073569	636
ENSMUSG00000074052	bidirectional_promoter_lncRNA	BC048644	ENSMUST00000140928	bidirectional_promoter_lncRNA		8	1	121907833	3522
ENSMUSG00000027272	protein_coding	Ubr1	ENSMUST00000138824	retained_intron		2	-1	120970692	1678
ENSMUSG00000106332	TEC	Gm43506	ENSMUST00000200675	TEC		5	-1	44517713	753
ENSMUSG00000025747	protein_coding	Tyms	ENSMUST00000196872	protein_coding		5	-1	30073581	559
ENSMUSG00000029108	protein_coding	Pcdh7	ENSMUST00000068110	protein_coding	principal3	5	1	57718020	5611
ENSMUSG00000028100	protein_coding	Nudt17	ENSMUST00000196773	retained_intron		3	-1	96707243	671
ENSMUSG00000083425	processed_pseudogene	Gm13992	ENSMUST00000120558	processed_pseudogene		2	1	106015200	156
ENSMUSG00000100156	lincRNA	Gm29053	ENSMUST00000187484	lincRNA		2	-1	106040496	370
ENSMUSG00000025747	protein_coding	Tyms	ENSMUST00000146520	nonsense_mediated_decay		5	-1	30073552	618
ENSMUSG00000097773	bidirectional_promoter_lncRNA	Gm10614	ENSMUST00000181414	bidirectional_promoter_lncRNA		8	1	120589531	2538
ENSMUSG00000029108	protein_coding	Pcdh7	ENSMUST00000094783	protein_coding	alternative1	5	1	57719097	3752
ENSMUSG00000003309	protein_coding	Ap1m2	ENSMUST00000213762	nonsense_mediated_decay		9	-1	21312316	2776
ENSMUSG00000027272	protein_coding	Ubr1	ENSMUST00000154023	processed_transcript		2	-1	120930342	516
ENSMUSG00000029108	protein_coding	Pcdh7	ENSMUST00000192287	protein_coding		5	1	57720123	2602
ENSMUSG00000025747	protein_coding	Tyms	ENSMUST00000134298	retained_intron		5	-1	30073586	816
ENSMUSG00000098172	antisense	Gm26973	ENSMUST00000182733	antisense		12	1	56535343	610
ENSMUSG00000029108	protein_coding	Pcdh7	ENSMUST00000195156	nonsense_mediated_decay		5	1	57721162	2199
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000008733	protein_coding		5	1	29735688	2918
ENSMUSG00000046808	polymorphic_pseudogene	Atp10d	ENSMUST00000126664	polymorphic_pseudogene		5	1	72203329	6052
ENSMUSG00000027272	protein_coding	Ubr1	ENSMUST00000129790	processed_transcript		2	-1	120915023	762
ENSMUSG00000098172	antisense	Gm26973	ENSMUST00000183231	antisense		12	1	56537365	338
ENSMUSG00000019429	protein_coding	Ffar3	ENSMUST00000094583	protein_coding	principal1	7	-1	30856178	1625
ENSMUSG00000025747	protein_coding	Tyms	ENSMUST00000198095	protein_coding		5	-1	30073576	447
ENSMUSG00000046714	protein_coding	Foxc2	ENSMUST00000054691	protein_coding	principal1	8	1	121116171	2725
ENSMUSG00000029108	protein_coding	Pcdh7	ENSMUST00000199310	protein_coding		5	1	57721913	659
ENSMUSG00000098172	antisense	Gm26973	ENSMUST00000182105	antisense		12	1	56537416	696
ENSMUSG00000036782	protein_coding	Klhl13	ENSMUST00000115319	protein_coding	alternative1	X	-1	23285559	3349
ENSMUSG00000046808	polymorphic_pseudogene	Atp10d	ENSMUST00000156937	retained_intron		5	1	72203353	2191
ENSMUSG00000025747	protein_coding	Tyms	ENSMUST00000138520	processed_transcript		5	-1	30073522	663
ENSMUSG00000029108	protein_coding	Pcdh7	ENSMUST00000192048	protein_coding		5	1	57722209	863
ENSMUSG00000030847	protein_coding	Bag3	ENSMUST00000033136	protein_coding	principal1	7	1	128523616	2562
ENSMUSG00000027272	protein_coding	Ubr1	ENSMUST00000135891	processed_transcript		2	-1	120889849	710
ENSMUSG00000032643	protein_coding	Fhl3	ENSMUST00000106199	protein_coding	principal1	4	1	124700701	1139
ENSMUSG00000105079	TEC	Gm43715	ENSMUST00000196307	TEC		5	1	57904639	2715
ENSMUSG00000097983	sense_intronic	Gm26971	ENSMUST00000182423	sense_intronic		8	1	120520615	1072
ENSMUSG00000019429	protein_coding	Ffar3	ENSMUST00000185748	protein_coding	principal1	7	-1	30856167	1234
ENSMUSG00000110467	lincRNA	Gm45781	ENSMUST00000212860	lincRNA		8	-1	123735142	539
ENSMUSG00000105050	TEC	Gm42482	ENSMUST00000198904	TEC		5	1	57798503	1947
ENSMUSG00000032643	protein_coding	Fhl3	ENSMUST00000145942	nonsense_mediated_decay		4	1	124700719	961
ENSMUSG00000105877	TEC	Gm42479	ENSMUST00000198654	TEC		5	1	57925620	1356
ENSMUSG00000108614	TEC	2610306O10Rik	ENSMUST00000206512	TEC		7	1	128538932	612
ENSMUSG00000051116	processed_pseudogene	Gm8121	ENSMUST00000153583	processed_pseudogene		5	1	57608569	499
ENSMUSG00000027272	protein_coding	Ubr1	ENSMUST00000153868	processed_transcript		2	-1	120871526	822
ENSMUSG00000108772	processed_pseudogene	Gm6063	ENSMUST00000206958	processed_pseudogene		6	-1	71642096	485
ENSMUSG00000104871	TEC	Gm42639	ENSMUST00000197061	TEC		5	1	57945042	1871
ENSMUSG00000104924	TEC	Gm43002	ENSMUST00000200310	TEC		5	1	57617844	155
ENSMUSG00000106517	TEC	Gm42634	ENSMUST00000197362	TEC		5	-1	57696377	381
ENSMUSG00000087519	processed_transcript	AV039307	ENSMUST00000133643	processed_transcript		2	1	120850705	644
ENSMUSG00000106646	TEC	Gm42483	ENSMUST00000197556	TEC		5	1	58047331	1742
ENSMUSG00000036782	protein_coding	Klhl13	ENSMUST00000115316	protein_coding		X	-1	23266802	3064
ENSMUSG00000104709	TEC	Gm42484	ENSMUST00000196075	TEC		5	1	57965414	2104
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000114839	protein_coding	principal1	5	1	29735940	1605
ENSMUSG00000044453	protein_coding	Ffar1	ENSMUST00000052700	protein_coding	principal1	7	-1	30861564	4175
ENSMUSG00000087519	processed_transcript	AV039307	ENSMUST00000124795	processed_transcript		2	1	120850717	1133
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000132863	retained_intron		6	1	125009145	1861
ENSMUSG00000087519	processed_transcript	AV039307	ENSMUST00000171483	processed_transcript		2	1	120866328	324
ENSMUSG00000036782	protein_coding	Klhl13	ENSMUST00000115317	protein_coding	alternative1	X	-1	23284829	3216
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000198694	protein_coding		5	1	29735989	505
ENSMUSG00000032643	protein_coding	Fhl3	ENSMUST00000038684	protein_coding		4	1	124700720	1664
ENSMUSG00000046808	polymorphic_pseudogene	Atp10d	ENSMUST00000136350	processed_transcript		5	1	72264644	3488
ENSMUSG00000091762	processed_pseudogene	Gm3191	ENSMUST00000167139	processed_pseudogene		12	1	106459150	346
ENSMUSG00000044594	protein_coding	Serpinb3a	ENSMUST00000112717	protein_coding	principal1	1	-1	107052303	1611
ENSMUSG00000046808	polymorphic_pseudogene	Atp10d	ENSMUST00000146393	processed_transcript		5	1	72280047	2484
ENSMUSG00000046808	polymorphic_pseudogene	Atp10d	ENSMUST00000169617	protein_coding		5	1	72203329	761
ENSMUSG00000024781	protein_coding	Lipa	ENSMUST00000178114	protein_coding	principal1	19	-1	34527474	2965
ENSMUSG00000091442	processed_pseudogene	Gm17031	ENSMUST00000016698	processed_pseudogene		12	1	106508242	1669
ENSMUSG00000046808	polymorphic_pseudogene	Atp10d	ENSMUST00000094710	protein_coding	principal1	5	1	72280047	2365
ENSMUSG00000044594	protein_coding	Serpinb3a	ENSMUST00000027567	protein_coding	principal1	1	-1	107051797	1620
ENSMUSG00000036782	protein_coding	Klhl13	ENSMUST00000144360	processed_transcript		X	-1	23296158	887
ENSMUSG00000036782	protein_coding	Klhl13	ENSMUST00000153345	processed_transcript		X	-1	23365053	395
ENSMUSG00000085105	antisense	Gm12758	ENSMUST00000127010	antisense		7	1	34234377	4175
ENSMUSG00000036782	protein_coding	Klhl13	ENSMUST00000035973	protein_coding	principal3	X	-1	23315179	2996
ENSMUSG00000108795	lincRNA	Gm45121	ENSMUST00000205396	lincRNA		7	-1	128593343	1153
ENSMUSG00000104904	lincRNA	9330198I05Rik	ENSMUST00000196846	lincRNA		5	1	108360187	1095
ENSMUSG00000082256	processed_pseudogene	Gm12287	ENSMUST00000119770	processed_pseudogene		11	-1	63600923	707
ENSMUSG00000040331	protein_coding	Nsmce4a	ENSMUST00000160289	protein_coding	principal1	7	-1	130547381	1435
ENSMUSG00000085105	antisense	Gm12758	ENSMUST00000205940	antisense		7	1	34234441	1112
ENSMUSG00000058056	protein_coding	Palld	ENSMUST00000121493	protein_coding		8	-1	61760089	5445
ENSMUSG00000083142	processed_pseudogene	Gm12288	ENSMUST00000121054	processed_pseudogene		11	-1	63818300	1282
ENSMUSG00000078380	processed_pseudogene	Gm6096	ENSMUST00000105172	processed_pseudogene		7	1	34251038	456
ENSMUSG00000106304	lincRNA	Gm42518	ENSMUST00000196277	lincRNA		5	-1	108364974	938
ENSMUSG00000024781	protein_coding	Lipa	ENSMUST00000236641	processed_transcript		19	-1	34501853	663
ENSMUSG00000096557	processed_pseudogene	Gm7258	ENSMUST00000179317	processed_pseudogene		7	-1	128596278	300
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000012734	protein_coding		5	1	29735995	1024
ENSMUSG00000081455	processed_pseudogene	Hmgb1-ps3	ENSMUST00000118415	processed_pseudogene		11	-1	63846818	636
ENSMUSG00000040331	protein_coding	Nsmce4a	ENSMUST00000162510	retained_intron		7	-1	130535973	895
ENSMUSG00000025317	protein_coding	Car5a	ENSMUST00000057653	protein_coding	principal1	8	-1	121944904	1249
ENSMUSG00000024781	protein_coding	Lipa	ENSMUST00000237497	processed_transcript		19	-1	34510980	586
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000127753	processed_transcript		5	1	29736024	123
ENSMUSG00000024781	protein_coding	Lipa	ENSMUST00000237617	processed_transcript		19	-1	34527411	1361
ENSMUSG00000046876	protein_coding	Atxn1	ENSMUST00000091628	protein_coding	principal3	13	-1	45964976	10569
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000196528	protein_coding		5	1	29736033	1018
ENSMUSG00000024781	protein_coding	Lipa	ENSMUST00000237513	retained_intron		19	-1	34527452	3895
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000196785	protein_coding		5	1	29737266	218
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000151976	retained_intron		5	1	29750722	668
ENSMUSG00000024781	protein_coding	Lipa	ENSMUST00000049572	protein_coding	principal1	19	-1	34527474	2969
ENSMUSG00000025317	protein_coding	Car5a	ENSMUST00000151462	processed_transcript		8	-1	121927474	458
ENSMUSG00000040760	protein_coding	Appl1	ENSMUST00000036570	protein_coding	principal1	14	-1	26971232	7642
ENSMUSG00000033411	protein_coding	Ctdspl2	ENSMUST00000036647	protein_coding	principal3	2	1	121956001	5053
ENSMUSG00000021366	protein_coding	Hivep1	ENSMUST00000060148	protein_coding	principal1	13	1	42052021	8753
ENSMUSG00000046876	protein_coding	Atxn1	ENSMUST00000167708	protein_coding	principal3	13	-1	45964957	3751
ENSMUSG00000038524	protein_coding	Fchsd1	ENSMUST00000043437	protein_coding	principal1	18	-1	37969774	4270
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000149553	processed_transcript		5	1	29754340	770
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000149396	retained_intron		5	1	29764181	472
ENSMUSG00000107070	lincRNA	Gm35191	ENSMUST00000200925	lincRNA		5	-1	39985628	2475
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000091789	protein_coding		18	1	82475146	4797
ENSMUSG00000021366	protein_coding	Hivep1	ENSMUST00000220525	protein_coding		13	1	42052404	501
ENSMUSG00000058056	protein_coding	Palld	ENSMUST00000121785	protein_coding	alternative2	8	-1	61902669	6349
ENSMUSG00000040331	protein_coding	Nsmce4a	ENSMUST00000159694	processed_transcript		7	-1	130573118	803
ENSMUSG00000038524	protein_coding	Fchsd1	ENSMUST00000166727	retained_intron		18	-1	37964061	422
ENSMUSG00000055401	protein_coding	Fbxo6	ENSMUST00000105706	protein_coding	principal1	4	-1	148151908	1938
ENSMUSG00000040760	protein_coding	Appl1	ENSMUST00000141599	retained_intron		14	-1	26958511	598
ENSMUSG00000021366	protein_coding	Hivep1	ENSMUST00000222491	processed_transcript		13	1	42157134	722
ENSMUSG00000040331	protein_coding	Nsmce4a	ENSMUST00000161470	retained_intron		7	-1	130539507	707
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000140376	protein_coding		5	1	29764475	847
ENSMUSG00000040331	protein_coding	Nsmce4a	ENSMUST00000207276	retained_intron		7	-1	130539208	2834
ENSMUSG00000058056	protein_coding	Palld	ENSMUST00000153495	retained_intron		8	-1	61515900	444
ENSMUSG00000029131	protein_coding	Dnajb6	ENSMUST00000139126	retained_intron		5	1	29765190	821
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000114676	protein_coding		18	1	82475148	1685
ENSMUSG00000021366	protein_coding	Hivep1	ENSMUST00000222854	protein_coding		13	1	42164322	721
ENSMUSG00000040331	protein_coding	Nsmce4a	ENSMUST00000161076	nonsense_mediated_decay		7	-1	130545954	688
ENSMUSG00000027166	protein_coding	Dnajc24	ENSMUST00000102555	protein_coding	principal1	2	-1	106003549	1197
ENSMUSG00000109480	processed_pseudogene	Gm45042	ENSMUST00000207377	processed_pseudogene		8	1	10929887	211
ENSMUSG00000040331	protein_coding	Nsmce4a	ENSMUST00000161414	retained_intron		7	-1	130542791	370
ENSMUSG00000109084	lincRNA	Gm44955	ENSMUST00000208843	lincRNA		8	-1	10947890	229
ENSMUSG00000109508	lincRNA	Gm44956	ENSMUST00000208277	lincRNA		8	-1	10970814	2887
ENSMUSG00000021366	protein_coding	Hivep1	ENSMUST00000220801	nonsense_mediated_decay		13	1	42184264	672
ENSMUSG00000046876	protein_coding	Atxn1	ENSMUST00000180110	protein_coding	alternative2	13	-1	45964977	3901
ENSMUSG00000083206	unprocessed_pseudogene	Gm11338	ENSMUST00000120086	unprocessed_pseudogene		13	1	23728548	1160
ENSMUSG00000034714	protein_coding	Ttyh2	ENSMUST00000045779	protein_coding	principal1	11	1	114675431	3486
ENSMUSG00000113033	unprocessed_pseudogene	Gm47799	ENSMUST00000220508	unprocessed_pseudogene		12	-1	26436819	224
ENSMUSG00000028100	protein_coding	Nudt17	ENSMUST00000171249	protein_coding	principal1	3	-1	96708562	1110
ENSMUSG00000027166	protein_coding	Dnajc24	ENSMUST00000124163	processed_transcript		2	-1	106003263	697
ENSMUSG00000058056	protein_coding	Palld	ENSMUST00000135439	protein_coding		8	-1	61591139	1325
ENSMUSG00000046876	protein_coding	Atxn1	ENSMUST00000221082	retained_intron		13	-1	45965008	3753
ENSMUSG00000046876	protein_coding	Atxn1	ENSMUST00000222943	processed_transcript		13	-1	45964976	420
ENSMUSG00000046876	protein_coding	Atxn1	ENSMUST00000222610	processed_transcript		13	-1	45872288	333
ENSMUSG00000027166	protein_coding	Dnajc24	ENSMUST00000133569	processed_transcript		2	-1	106002077	527
ENSMUSG00000034714	protein_coding	Ttyh2	ENSMUST00000141111	processed_transcript		11	1	114675516	695
ENSMUSG00000058056	protein_coding	Palld	ENSMUST00000136825	retained_intron		8	-1	61533841	680
ENSMUSG00000038524	protein_coding	Fchsd1	ENSMUST00000166148	protein_coding		18	-1	37969769	369
ENSMUSG00000115113	protein_coding	Smim40-ps	ENSMUST00000226885	protein_coding	principal1	17	1	33873837	246
ENSMUSG00000055401	protein_coding	Fbxo6	ENSMUST00000030858	protein_coding	principal1	4	-1	148151913	1346
ENSMUSG00000027166	protein_coding	Dnajc24	ENSMUST00000151581	processed_transcript		2	-1	106003202	339
ENSMUSG00000040760	protein_coding	Appl1	ENSMUST00000142645	retained_intron		14	-1	26970500	1226
ENSMUSG00000093696	protein_coding	Vmn1r7	ENSMUST00000176252	protein_coding	principal1	6	-1	57025324	1219
ENSMUSG00000038524	protein_coding	Fchsd1	ENSMUST00000166973	retained_intron		18	-1	37967749	690
ENSMUSG00000027166	protein_coding	Dnajc24	ENSMUST00000155811	protein_coding		2	-1	106002008	605
ENSMUSG00000040760	protein_coding	Appl1	ENSMUST00000224406	processed_transcript		14	-1	26970505	427
ENSMUSG00000028100	protein_coding	Nudt17	ENSMUST00000029742	protein_coding		3	-1	96708539	1039
ENSMUSG00000040760	protein_coding	Appl1	ENSMUST00000142261	retained_intron		14	-1	26970463	503
ENSMUSG00000027341	protein_coding	Tmem230	ENSMUST00000110164	protein_coding	principal1	2	-1	132247654	2957
ENSMUSG00000074981	transcribed_unitary_pseudogene	Dcdc5	ENSMUST00000126340	processed_transcript		2	1	106003336	1497
ENSMUSG00000058056	protein_coding	Palld	ENSMUST00000149042	retained_intron		8	-1	61760098	2570
ENSMUSG00000038524	protein_coding	Fchsd1	ENSMUST00000168816	retained_intron		18	-1	37968052	350
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000161462	processed_transcript		8	-1	104523181	942
ENSMUSG00000061208	protein_coding	Vmn1r8	ENSMUST00000227706	protein_coding	principal1	6	1	57032284	1563
ENSMUSG00000058056	protein_coding	Palld	ENSMUST00000123523	retained_intron		8	-1	61760089	2487
ENSMUSG00000055401	protein_coding	Fbxo6	ENSMUST00000056965	protein_coding	principal1	4	-1	148152059	1163
ENSMUSG00000081281	processed_pseudogene	Rpl7-ps9	ENSMUST00000118173	processed_pseudogene		X	1	36668217	797
ENSMUSG00000038524	protein_coding	Fchsd1	ENSMUST00000163131	protein_coding		18	-1	37969769	454
ENSMUSG00000061208	protein_coding	Vmn1r8	ENSMUST00000228690	protein_coding	principal1	6	1	57032308	1699
ENSMUSG00000058056	protein_coding	Palld	ENSMUST00000034057	protein_coding	principal3	8	-1	61902690	3566
ENSMUSG00000115636	lincRNA	Gm49120	ENSMUST00000228323	lincRNA		14	1	48590599	347
ENSMUSG00000061208	protein_coding	Vmn1r8	ENSMUST00000078186	protein_coding	principal1	6	1	57035913	1213
ENSMUSG00000031823	protein_coding	Zdhhc7	ENSMUST00000034280	protein_coding	principal1	8	-1	120101482	3069
ENSMUSG00000109729	bidirectional_promoter_lncRNA	Gm45418	ENSMUST00000210693	bidirectional_promoter_lncRNA		8	-1	61928028	649
ENSMUSG00000109729	bidirectional_promoter_lncRNA	Gm45418	ENSMUST00000210376	bidirectional_promoter_lncRNA		8	-1	61927999	361
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000145627	protein_coding		16	1	32643874	380
ENSMUSG00000024191	protein_coding	Bnip1	ENSMUST00000015725	protein_coding	principal1	17	1	26781066	1098
ENSMUSG00000038524	protein_coding	Fchsd1	ENSMUST00000168136	retained_intron		18	-1	37969757	526
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000124585	protein_coding		16	1	32644291	471
ENSMUSG00000031823	protein_coding	Zdhhc7	ENSMUST00000150444	retained_intron		8	-1	120086835	831
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000037992	protein_coding	principal2	19	-1	4269180	2736
ENSMUSG00000027341	protein_coding	Tmem230	ENSMUST00000110163	protein_coding	principal1	2	-1	132247769	1551
ENSMUSG00000055401	protein_coding	Fbxo6	ENSMUST00000152098	protein_coding		4	-1	148152140	952
ENSMUSG00000055401	protein_coding	Fbxo6	ENSMUST00000126615	protein_coding		4	-1	148149719	794
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000113852	protein_coding	alternative2	19	-1	4269180	2705
ENSMUSG00000038524	protein_coding	Fchsd1	ENSMUST00000164222	nonsense_mediated_decay		18	-1	37969769	419
ENSMUSG00000031823	protein_coding	Zdhhc7	ENSMUST00000124044	retained_intron		8	-1	120088075	667
ENSMUSG00000035069	protein_coding	Oma1	ENSMUST00000035780	protein_coding	principal1	4	1	103313812	1915
ENSMUSG00000024191	protein_coding	Bnip1	ENSMUST00000126505	nonsense_mediated_decay		17	1	26781079	1139
ENSMUSG00000038524	protein_coding	Fchsd1	ENSMUST00000171253	retained_intron		18	-1	37969528	357
ENSMUSG00000016510	protein_coding	Mtif3	ENSMUST00000066675	protein_coding	principal1	5	-1	146963785	4927
ENSMUSG00000055401	protein_coding	Fbxo6	ENSMUST00000134261	protein_coding		4	-1	148151925	811
ENSMUSG00000100759	antisense	1700029B22Rik	ENSMUST00000190866	antisense		7	1	131146439	686
ENSMUSG00000031823	protein_coding	Zdhhc7	ENSMUST00000141886	retained_intron		8	-1	120088268	670
ENSMUSG00000042529	protein_coding	Kcnj12	ENSMUST00000089184	protein_coding	principal3	11	1	61022564	2291
ENSMUSG00000027341	protein_coding	Tmem230	ENSMUST00000028816	protein_coding	principal1	2	-1	132247807	1612
ENSMUSG00000020636	protein_coding	Allc	ENSMUST00000110917	protein_coding	principal1	12	-1	28582515	1384
ENSMUSG00000100759	antisense	1700029B22Rik	ENSMUST00000186532	antisense		7	1	131146444	694
ENSMUSG00000055401	protein_coding	Fbxo6	ENSMUST00000132083	protein_coding		4	-1	148151646	339
ENSMUSG00000024191	protein_coding	Bnip1	ENSMUST00000128461	retained_intron		17	1	26781082	2584
ENSMUSG00000031823	protein_coding	Zdhhc7	ENSMUST00000123186	processed_transcript		8	-1	120101072	246
ENSMUSG00000035069	protein_coding	Oma1	ENSMUST00000143399	processed_transcript		4	1	103324484	426
ENSMUSG00000100759	antisense	1700029B22Rik	ENSMUST00000185969	antisense		7	1	131146482	582
ENSMUSG00000055401	protein_coding	Fbxo6	ENSMUST00000168503	protein_coding	principal1	4	-1	148152135	1240
ENSMUSG00000024191	protein_coding	Bnip1	ENSMUST00000135899	retained_intron		17	1	26781091	3443
ENSMUSG00000024191	protein_coding	Bnip1	ENSMUST00000135824	protein_coding		17	1	26781093	629
ENSMUSG00000027341	protein_coding	Tmem230	ENSMUST00000143782	processed_transcript		2	-1	132247759	359
ENSMUSG00000035069	protein_coding	Oma1	ENSMUST00000133178	processed_transcript		4	1	103328908	421
ENSMUSG00000074981	transcribed_unitary_pseudogene	Dcdc5	ENSMUST00000122388	transcribed_unitary_pseudogene		2	1	106038218	5296
ENSMUSG00000112894	antisense	Gm47009	ENSMUST00000220425	antisense		10	1	120168649	597
ENSMUSG00000084068	processed_pseudogene	Gm11573	ENSMUST00000119956	processed_pseudogene		11	1	97096933	394
ENSMUSG00000033411	protein_coding	Ctdspl2	ENSMUST00000140570	processed_transcript		2	1	121956480	3543
ENSMUSG00000024191	protein_coding	Bnip1	ENSMUST00000134344	nonsense_mediated_decay		17	1	26781121	1087
ENSMUSG00000074981	transcribed_unitary_pseudogene	Dcdc5	ENSMUST00000152776	processed_transcript		2	1	106222057	2779
ENSMUSG00000021709	protein_coding	Erbin	ENSMUST00000091269	protein_coding	alternative2	13	-1	103920295	6224
ENSMUSG00000027341	protein_coding	Tmem230	ENSMUST00000141813	retained_intron		2	-1	132247756	407
ENSMUSG00000042529	protein_coding	Kcnj12	ENSMUST00000041944	protein_coding	alternative2	11	1	61065804	2459
ENSMUSG00000074981	transcribed_unitary_pseudogene	Dcdc5	ENSMUST00000148101	processed_transcript		2	1	106226454	618
ENSMUSG00000020636	protein_coding	Allc	ENSMUST00000020965	protein_coding	principal1	12	-1	28582523	1500
ENSMUSG00000024191	protein_coding	Bnip1	ENSMUST00000137989	protein_coding		17	1	26781158	818
ENSMUSG00000020225	protein_coding	Tmbim4	ENSMUST00000156247	processed_transcript		10	1	120201590	874
ENSMUSG00000027341	protein_coding	Tmem230	ENSMUST00000180286	protein_coding	principal1	2	-1	132247788	1531
ENSMUSG00000024191	protein_coding	Bnip1	ENSMUST00000147516	retained_intron		17	1	26786356	747
ENSMUSG00000074981	transcribed_unitary_pseudogene	Dcdc5	ENSMUST00000037284	retained_intron		2	1	106383687	3093
ENSMUSG00000033411	protein_coding	Ctdspl2	ENSMUST00000110578	protein_coding	alternative1	2	1	121956411	3386
ENSMUSG00000042529	protein_coding	Kcnj12	ENSMUST00000108717	protein_coding	principal3	11	1	61065804	2463
ENSMUSG00000016510	protein_coding	Mtif3	ENSMUST00000016654	protein_coding	principal1	5	-1	146963787	2131
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000237501	nonsense_mediated_decay		19	-1	4269100	1990
ENSMUSG00000020225	protein_coding	Tmbim4	ENSMUST00000145015	processed_transcript		10	1	120201612	593
ENSMUSG00000082217	processed_pseudogene	Gm1401	ENSMUST00000122048	processed_pseudogene		6	-1	33248099	772
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000235685	nonsense_mediated_decay		19	-1	4265633	1064
ENSMUSG00000024191	protein_coding	Bnip1	ENSMUST00000131362	retained_intron		17	1	26790775	895
ENSMUSG00000047564	protein_coding	Krtap3-1	ENSMUST00000055502	protein_coding	principal1	11	-1	99566630	604
ENSMUSG00000020225	protein_coding	Tmbim4	ENSMUST00000156877	processed_transcript		10	1	120201658	360
ENSMUSG00000020225	protein_coding	Tmbim4	ENSMUST00000135794	processed_transcript		10	1	120202651	318
ENSMUSG00000016510	protein_coding	Mtif3	ENSMUST00000110564	protein_coding	principal1	5	-1	146963749	1257
ENSMUSG00000040125	protein_coding	Gpr26	ENSMUST00000045840	protein_coding	principal1	7	1	131966460	11571
ENSMUSG00000104667	lincRNA	Gm4961	ENSMUST00000197982	lincRNA		5	1	30092940	2249
ENSMUSG00000059852	protein_coding	Kcng2	ENSMUST00000077962	protein_coding	principal1	18	-1	80364254	2813
ENSMUSG00000033411	protein_coding	Ctdspl2	ENSMUST00000128883	processed_transcript		2	1	121956486	1236
ENSMUSG00000109016	lincRNA	Gm44647	ENSMUST00000207402	lincRNA		7	1	130520845	428
ENSMUSG00000117523	antisense	Gm50071	ENSMUST00000234317	antisense		17	1	24086864	567
ENSMUSG00000016510	protein_coding	Mtif3	ENSMUST00000110566	protein_coding	principal1	5	-1	146963797	1134
ENSMUSG00000033411	protein_coding	Ctdspl2	ENSMUST00000110574	protein_coding	principal3	2	1	121956659	1616
ENSMUSG00000109550	lincRNA	Gm44892	ENSMUST00000208595	lincRNA		7	1	132321595	488
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000236794	protein_coding	alternative2	19	-1	4269180	2062
ENSMUSG00000059852	protein_coding	Kcng2	ENSMUST00000184574	protein_coding		18	-1	80363336	616
ENSMUSG00000016510	protein_coding	Mtif3	ENSMUST00000125217	protein_coding		5	-1	146963743	397
ENSMUSG00000033411	protein_coding	Ctdspl2	ENSMUST00000110572	protein_coding		2	1	121969082	4160
ENSMUSG00000016510	protein_coding	Mtif3	ENSMUST00000140526	protein_coding		5	-1	146963800	364
ENSMUSG00000045165	protein_coding	AI467606	ENSMUST00000056288	protein_coding	principal1	7	1	127091359	1932
ENSMUSG00000108870	lincRNA	Gm44893	ENSMUST00000207259	lincRNA		7	1	132420030	443
ENSMUSG00000032035	protein_coding	Ets1	ENSMUST00000183879	retained_intron		9	1	32636221	1478
ENSMUSG00000059852	protein_coding	Kcng2	ENSMUST00000184366	protein_coding		18	-1	80363650	279
ENSMUSG00000033411	protein_coding	Ctdspl2	ENSMUST00000138920	retained_intron		2	1	121956460	1762
ENSMUSG00000108940	TEC	Gm45719	ENSMUST00000207954	TEC		7	-1	130457673	1662
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000235815	retained_intron		19	-1	4269180	2861
ENSMUSG00000033411	protein_coding	Ctdspl2	ENSMUST00000131258	retained_intron		2	1	121956486	4290
ENSMUSG00000032035	protein_coding	Ets1	ENSMUST00000184110	retained_intron		9	1	32636239	2197
ENSMUSG00000033411	protein_coding	Ctdspl2	ENSMUST00000127265	retained_intron		2	1	121978812	784
ENSMUSG00000045165	protein_coding	AI467606	ENSMUST00000206102	protein_coding	principal1	7	1	127091424	832
ENSMUSG00000108839	TEC	Gm44547	ENSMUST00000207793	TEC		7	-1	131786579	1446
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000235731	retained_intron		19	-1	4264474	604
ENSMUSG00000097593	antisense	Gm26676	ENSMUST00000181877	antisense		18	1	80323335	2226
ENSMUSG00000108964	processed_pseudogene	Gm18600	ENSMUST00000207205	processed_pseudogene		7	1	131457012	505
ENSMUSG00000021709	protein_coding	Erbin	ENSMUST00000188997	protein_coding	alternative2	13	-1	103920295	5084
ENSMUSG00000026835	protein_coding	Fcnb	ENSMUST00000135472	protein_coding		2	-1	28084885	364
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000235563	retained_intron		19	-1	4269168	3706
ENSMUSG00000102959	TEC	Gm37015	ENSMUST00000192763	TEC		18	-1	80303680	1521
ENSMUSG00000003309	protein_coding	Ap1m2	ENSMUST00000115433	protein_coding	alternative1	9	-1	21312337	2586
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000237718	retained_intron		19	-1	4265700	471
ENSMUSG00000102260	TEC	D330025C20Rik	ENSMUST00000191632	TEC		18	1	80362781	3046
ENSMUSG00000105601	TEC	Gm42725	ENSMUST00000199296	TEC		5	-1	65535760	4193
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000237670	protein_coding		19	-1	4267833	727
ENSMUSG00000107195	TEC	4930589O11Rik	ENSMUST00000200768	TEC		5	1	65493096	920
ENSMUSG00000104641	TEC	Gm43290	ENSMUST00000200359	TEC		5	-1	65478061	1557
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000236440	retained_intron		19	-1	4266235	438
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000163128	nonsense_mediated_decay		18	1	37955079	1965
ENSMUSG00000105835	protein_coding	Gm43552	ENSMUST00000196121	protein_coding	principal1	5	-1	65492833	365
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000236721	retained_intron		19	-1	4269080	598
ENSMUSG00000104917	TEC	Gm43289	ENSMUST00000200537	TEC		5	-1	65431580	1475
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000168056	nonsense_mediated_decay		18	1	37955139	2091
ENSMUSG00000034616	protein_coding	Ssh3	ENSMUST00000237790	processed_transcript		19	-1	4268241	352
ENSMUSG00000022651	protein_coding	Retnlg	ENSMUST00000065666	protein_coding	principal1	16	1	48872621	593
ENSMUSG00000096711	lincRNA	Gm21599	ENSMUST00000187381	lincRNA		Y	-1	32779767	174
ENSMUSG00000006519	protein_coding	Cyba	ENSMUST00000212600	protein_coding		8	-1	122432908	638
ENSMUSG00000096711	lincRNA	Gm21599	ENSMUST00000178249	lincRNA		Y	-1	32779761	498
ENSMUSG00000021709	protein_coding	Erbin	ENSMUST00000169083	protein_coding	alternative2	13	-1	103920295	5435
ENSMUSG00000109564	protein_coding	Muc16	ENSMUST00000207857	protein_coding		9	-1	18622235	7700
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000236883	nonsense_mediated_decay		19	-1	5610035	2245
ENSMUSG00000021709	protein_coding	Erbin	ENSMUST00000191275	protein_coding	principal3	13	-1	103920295	5552
ENSMUSG00000109564	protein_coding	Muc16	ENSMUST00000208663	protein_coding	principal1	9	-1	18674530	25437
ENSMUSG00000003309	protein_coding	Ap1m2	ENSMUST00000003397	protein_coding	principal3	9	-1	21312311	1706
ENSMUSG00000109564	protein_coding	Muc16	ENSMUST00000207509	protein_coding		9	-1	18622235	1099
ENSMUSG00000001751	protein_coding	Naglu	ENSMUST00000001802	protein_coding	principal1	11	1	101070012	2560
ENSMUSG00000003309	protein_coding	Ap1m2	ENSMUST00000213483	retained_intron		9	-1	21302987	457
ENSMUSG00000109564	protein_coding	Muc16	ENSMUST00000034653	protein_coding		9	-1	18512885	1035
ENSMUSG00000070407	protein_coding	Hs3st3b1	ENSMUST00000094103	protein_coding	principal1	11	-1	63922290	4911
ENSMUSG00000003309	protein_coding	Ap1m2	ENSMUST00000213250	protein_coding		9	-1	21312311	736
ENSMUSG00000107400	unprocessed_pseudogene	Olfr797-ps1	ENSMUST00000203614	unprocessed_pseudogene		10	-1	129622612	415
ENSMUSG00000006519	protein_coding	Cyba	ENSMUST00000017604	protein_coding	principal1	8	-1	122432930	744
ENSMUSG00000066571	protein_coding	4931406P16Rik	ENSMUST00000108074	protein_coding	principal1	7	-1	34313551	6224
ENSMUSG00000001751	protein_coding	Naglu	ENSMUST00000140735	processed_transcript		11	1	101071552	919
ENSMUSG00000086136	lincRNA	Gm12718	ENSMUST00000156144	lincRNA		4	1	103382500	660
ENSMUSG00000001751	protein_coding	Naglu	ENSMUST00000138409	processed_transcript		11	1	101071963	817
ENSMUSG00000086136	lincRNA	Gm12718	ENSMUST00000150345	lincRNA		4	1	103382521	553
ENSMUSG00000115407	processed_pseudogene	Gm2140	ENSMUST00000226778	processed_pseudogene		15	1	43808461	464
ENSMUSG00000006519	protein_coding	Cyba	ENSMUST00000212822	processed_transcript		8	-1	122432905	682
ENSMUSG00000110525	processed_pseudogene	Gm45893	ENSMUST00000211899	processed_pseudogene		8	1	122836551	247
ENSMUSG00000081584	processed_pseudogene	Gm12716	ENSMUST00000120606	processed_pseudogene		4	-1	103544727	1354
ENSMUSG00000079508	protein_coding	Apoo	ENSMUST00000113896	protein_coding		X	1	94367165	1032
ENSMUSG00000097203	lincRNA	4732419C18Rik	ENSMUST00000181805	lincRNA		8	-1	123754726	3536
ENSMUSG00000087482	processed_transcript	Gm12720	ENSMUST00000123834	processed_transcript		4	-1	103550682	472
ENSMUSG00000039981	protein_coding	Zc3h12d	ENSMUST00000039484	protein_coding	principal1	10	1	7832470	4092
ENSMUSG00000020225	protein_coding	Tmbim4	ENSMUST00000020446	protein_coding	principal1	10	1	120208750	904
ENSMUSG00000041695	protein_coding	Kcnj2	ENSMUST00000042970	protein_coding	principal1	11	1	111066164	5444
ENSMUSG00000066571	protein_coding	4931406P16Rik	ENSMUST00000206399	protein_coding		7	-1	34313522	4158
ENSMUSG00000026835	protein_coding	Fcnb	ENSMUST00000028179	protein_coding	principal1	2	-1	28084885	1170
ENSMUSG00000059195	processed_pseudogene	Gm12715	ENSMUST00000121430	processed_pseudogene		4	1	103563402	1128
ENSMUSG00000066571	protein_coding	4931406P16Rik	ENSMUST00000205264	protein_coding		7	-1	34245305	834
ENSMUSG00000025044	protein_coding	Msr1	ENSMUST00000026021	protein_coding	principal1	8	-1	39642620	1424
ENSMUSG00000026835	protein_coding	Fcnb	ENSMUST00000117486	protein_coding		2	-1	28084885	873
ENSMUSG00000020225	protein_coding	Tmbim4	ENSMUST00000134797	protein_coding		10	1	120208780	486
ENSMUSG00000103680	TEC	Gm37072	ENSMUST00000194570	TEC		1	-1	161001845	837
ENSMUSG00000066571	protein_coding	4931406P16Rik	ENSMUST00000206245	retained_intron		7	-1	34245116	842
ENSMUSG00000066571	protein_coding	4931406P16Rik	ENSMUST00000205581	retained_intron		7	-1	34257219	851
ENSMUSG00000024491	protein_coding	Rbm27	ENSMUST00000091920	protein_coding	principal1	18	1	42275353	6266
ENSMUSG00000101728	lincRNA	Gm28765	ENSMUST00000189752	lincRNA		Y	-1	32819299	537
ENSMUSG00000101728	lincRNA	Gm28765	ENSMUST00000190380	lincRNA		Y	-1	32819299	352
ENSMUSG00000117356	bidirectional_promoter_lncRNA	Gm46633	ENSMUST00000234596	bidirectional_promoter_lncRNA		18	1	7004963	1443
ENSMUSG00000026715	protein_coding	Serpinc1	ENSMUST00000193477	retained_intron		1	1	160978585	3186
ENSMUSG00000117381	processed_pseudogene	Gm10350	ENSMUST00000235104	processed_pseudogene		18	-1	7044135	227
ENSMUSG00000025044	protein_coding	Msr1	ENSMUST00000170091	protein_coding		8	-1	39642673	3636
ENSMUSG00000066571	protein_coding	4931406P16Rik	ENSMUST00000206018	retained_intron		7	-1	34313550	2055
ENSMUSG00000086359	antisense	9630013K17Rik	ENSMUST00000146915	antisense		11	1	63964226	1072
ENSMUSG00000024359	protein_coding	Hspa9	ENSMUST00000025217	protein_coding	principal1	18	-1	34954357	3049
ENSMUSG00000024491	protein_coding	Rbm27	ENSMUST00000236240	protein_coding		18	1	42275372	6301
ENSMUSG00000100509	unprocessed_pseudogene	Gm21810	ENSMUST00000186188	unprocessed_pseudogene		Y	-1	33105900	696
ENSMUSG00000028656	protein_coding	Cap1	ENSMUST00000106255	protein_coding	principal1	4	-1	122886044	2737
ENSMUSG00000066571	protein_coding	4931406P16Rik	ENSMUST00000132975	processed_transcript		7	-1	34313545	624
ENSMUSG00000025044	protein_coding	Msr1	ENSMUST00000210525	protein_coding		8	-1	39642671	691
ENSMUSG00000024491	protein_coding	Rbm27	ENSMUST00000237086	retained_intron		18	1	42298243	372
ENSMUSG00000084884	antisense	Gm12289	ENSMUST00000130860	antisense		11	1	64012615	2235
ENSMUSG00000024359	protein_coding	Hspa9	ENSMUST00000237399	retained_intron		18	-1	34939310	836
ENSMUSG00000095553	lincRNA	Gm21916	ENSMUST00000187044	lincRNA		Y	1	33140698	174
ENSMUSG00000033825	protein_coding	Tpsb2	ENSMUST00000234477	protein_coding	principal1	17	1	25366305	1118
ENSMUSG00000066571	protein_coding	4931406P16Rik	ENSMUST00000146025	processed_transcript		7	-1	34305512	516
ENSMUSG00000024359	protein_coding	Hspa9	ENSMUST00000236908	retained_intron		18	-1	34940862	883
ENSMUSG00000095553	lincRNA	Gm21916	ENSMUST00000178771	lincRNA		Y	1	33140704	498
ENSMUSG00000020225	protein_coding	Tmbim4	ENSMUST00000141206	nonsense_mediated_decay		10	1	120208793	677
ENSMUSG00000066571	protein_coding	4931406P16Rik	ENSMUST00000205618	processed_transcript		7	-1	34313508	132
ENSMUSG00000026715	protein_coding	Serpinc1	ENSMUST00000195438	nonsense_mediated_decay		1	1	160978606	900
ENSMUSG00000024359	protein_coding	Hspa9	ENSMUST00000235244	retained_intron		18	-1	34948124	504
ENSMUSG00000021367	protein_coding	Edn1	ENSMUST00000021796	protein_coding	principal1	13	1	42301476	2139
ENSMUSG00000021709	protein_coding	Erbin	ENSMUST00000189323	retained_intron		13	-1	103920514	3446
ENSMUSG00000020225	protein_coding	Tmbim4	ENSMUST00000134203	retained_intron		10	1	120220688	381
ENSMUSG00000024359	protein_coding	Hspa9	ENSMUST00000237289	retained_intron		18	-1	34951573	483
ENSMUSG00000079508	protein_coding	Apoo	ENSMUST00000113897	protein_coding		X	1	94367154	1218
ENSMUSG00000033825	protein_coding	Tpsb2	ENSMUST00000234057	protein_coding		17	1	25366550	1289
ENSMUSG00000033825	protein_coding	Tpsb2	ENSMUST00000234712	protein_coding		17	1	25366552	932
ENSMUSG00000113619	antisense	Gm47118	ENSMUST00000221433	antisense		13	-1	42304991	400
ENSMUSG00000079508	protein_coding	Apoo	ENSMUST00000113895	protein_coding		X	1	94367183	1173
ENSMUSG00000033825	protein_coding	Tpsb2	ENSMUST00000069616	protein_coding	principal1	17	1	25366550	1081
ENSMUSG00000066571	protein_coding	4931406P16Rik	ENSMUST00000085592	protein_coding	principal1	7	-1	34285599	5798
ENSMUSG00000025044	protein_coding	Msr1	ENSMUST00000210681	processed_transcript		8	-1	39642671	421
ENSMUSG00000024169	protein_coding	Ift140	ENSMUST00000142000	protein_coding	alternative2	17	1	25016085	6942
ENSMUSG00000021709	protein_coding	Erbin	ENSMUST00000022222	protein_coding	alternative2	13	-1	103920514	6369
ENSMUSG00000024491	protein_coding	Rbm27	ENSMUST00000237798	retained_intron		18	1	42299121	5565
ENSMUSG00000024491	protein_coding	Rbm27	ENSMUST00000046972	protein_coding		18	1	42275353	6134
ENSMUSG00000025044	protein_coding	Msr1	ENSMUST00000210589	retained_intron		8	-1	39642653	2547
ENSMUSG00000108737	TEC	BC060293	ENSMUST00000207005	TEC		7	-1	34251355	1104
ENSMUSG00000024169	protein_coding	Ift140	ENSMUST00000137386	protein_coding		17	1	25016091	3774
ENSMUSG00000058017	protein_coding	Serpinb3d	ENSMUST00000023861	protein_coding	principal1	1	-1	107083506	1216
ENSMUSG00000028656	protein_coding	Cap1	ENSMUST00000069533	protein_coding	principal1	4	-1	122885911	2620
ENSMUSG00000020225	protein_coding	Tmbim4	ENSMUST00000148678	retained_intron		10	1	120221821	739
ENSMUSG00000104722	processed_pseudogene	Gm43007	ENSMUST00000197618	processed_pseudogene		6	-1	68297292	291
ENSMUSG00000047253	protein_coding	Krtap1-5	ENSMUST00000054532	protein_coding	principal1	11	-1	99581016	1041
ENSMUSG00000020225	protein_coding	Tmbim4	ENSMUST00000123802	retained_intron		10	1	120221821	647
ENSMUSG00000082938	processed_pseudogene	Gm2810	ENSMUST00000118681	processed_pseudogene		5	1	40328438	990
ENSMUSG00000028656	protein_coding	Cap1	ENSMUST00000106257	protein_coding	principal1	4	-1	122886056	2768
ENSMUSG00000105684	processed_pseudogene	Gm42612	ENSMUST00000197986	processed_pseudogene		6	1	68297762	623
ENSMUSG00000065956	protein_coding	Defa37	ENSMUST00000084040	protein_coding	principal1	8	1	21565386	403
ENSMUSG00000106865	TEC	4930519E07Rik	ENSMUST00000200907	TEC		5	1	41281236	1665
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000054553	protein_coding		6	1	125009179	2451
ENSMUSG00000079508	protein_coding	Apoo	ENSMUST00000113898	protein_coding	principal1	X	1	94367117	784
ENSMUSG00000106895	processed_pseudogene	Gm4754	ENSMUST00000201337	processed_pseudogene		5	1	41342123	809
ENSMUSG00000028656	protein_coding	Cap1	ENSMUST00000128485	protein_coding		4	-1	122885965	635
ENSMUSG00000024169	protein_coding	Ift140	ENSMUST00000024983	protein_coding	principal2	17	1	25016391	5489
ENSMUSG00000031962	protein_coding	Cdh15	ENSMUST00000034443	protein_coding	principal1	8	1	122847966	3251
ENSMUSG00000083987	unprocessed_pseudogene	Gm15311	ENSMUST00000119682	unprocessed_pseudogene		8	1	21576640	282
ENSMUSG00000028656	protein_coding	Cap1	ENSMUST00000151041	processed_transcript		4	-1	122885864	384
ENSMUSG00000049134	protein_coding	Nrap	ENSMUST00000167239	protein_coding	alternative2	19	-1	56390011	4752
ENSMUSG00000040824	protein_coding	Snrpd2	ENSMUST00000049294	protein_coding	principal1	7	1	19149722	1420
ENSMUSG00000104424	processed_pseudogene	Gm19058	ENSMUST00000192135	processed_pseudogene		1	-1	187006604	598
ENSMUSG00000024231	protein_coding	Cul2	ENSMUST00000025073	protein_coding		18	1	3382988	3727
ENSMUSG00000028656	protein_coding	Cap1	ENSMUST00000140783	processed_transcript		4	-1	122885860	618
ENSMUSG00000024169	protein_coding	Ift140	ENSMUST00000151776	processed_transcript		17	1	25016399	343
ENSMUSG00000105606	IG_V_gene	Igkv2-109	ENSMUST00000103322	IG_V_gene	principal1	6	1	68302427	374
ENSMUSG00000009210	protein_coding	Prr29	ENSMUST00000009354	protein_coding		11	1	106365472	1112
ENSMUSG00000028656	protein_coding	Cap1	ENSMUST00000150919	processed_transcript		4	-1	122864632	587
ENSMUSG00000107135	processed_pseudogene	Gm43806	ENSMUST00000201766	processed_pseudogene		5	-1	41422044	469
ENSMUSG00000029094	protein_coding	Afap1	ENSMUST00000064571	protein_coding	principal1	5	1	35893319	6618
ENSMUSG00000040824	protein_coding	Snrpd2	ENSMUST00000206766	retained_intron		7	1	19149859	1234
ENSMUSG00000118048	processed_pseudogene	Gm50257	ENSMUST00000237722	processed_pseudogene		19	1	34549264	129
ENSMUSG00000024169	protein_coding	Ift140	ENSMUST00000156945	processed_transcript		17	1	25025876	740
ENSMUSG00000024169	protein_coding	Ift140	ENSMUST00000232788	retained_intron		17	1	25031835	846
ENSMUSG00000062186	protein_coding	Olfr395	ENSMUST00000215690	protein_coding	principal1	11	-1	73909299	4275
ENSMUSG00000105043	IG_V_pseudogene	Igkv1-108	ENSMUST00000198926	IG_V_pseudogene		6	1	68312062	298
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000145138	retained_intron		6	1	125009227	3603
ENSMUSG00000029094	protein_coding	Afap1	ENSMUST00000146300	processed_transcript		5	1	35893465	1890
ENSMUSG00000030674	protein_coding	Qprt	ENSMUST00000032912	protein_coding	principal1	7	-1	127122226	2050
ENSMUSG00000062186	protein_coding	Olfr395	ENSMUST00000072991	protein_coding	principal1	11	-1	73907490	939
ENSMUSG00000029094	protein_coding	Afap1	ENSMUST00000141824	protein_coding		5	1	35913082	1994
ENSMUSG00000106494	IG_V_pseudogene	Igkv2-107	ENSMUST00000196000	IG_V_pseudogene		6	1	68326098	313
ENSMUSG00000036181	protein_coding	H1f2	ENSMUST00000040914	protein_coding	principal1	13	1	23738808	1560
ENSMUSG00000029094	protein_coding	Afap1	ENSMUST00000212374	protein_coding		5	1	35984188	501
ENSMUSG00000109789	processed_pseudogene	Gm2033	ENSMUST00000210753	processed_pseudogene		8	-1	39720966	2287
ENSMUSG00000029094	protein_coding	Afap1	ENSMUST00000201482	retained_intron		5	1	35987005	4222
ENSMUSG00000029201	protein_coding	Ugdh	ENSMUST00000031103	protein_coding	principal1	5	-1	65435949	2550
ENSMUSG00000042148	protein_coding	Cox10	ENSMUST00000049091	protein_coding	principal1	11	-1	64079466	2915
ENSMUSG00000029419	protein_coding	Ajm1	ENSMUST00000114217	protein_coding	principal1	2	-1	25581728	4881
ENSMUSG00000006204	protein_coding	Cdcp3	ENSMUST00000050586	protein_coding		7	1	131174402	2928
ENSMUSG00000030674	protein_coding	Qprt	ENSMUST00000129332	processed_transcript		7	-1	127122041	484
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000113641	protein_coding	principal2	19	-1	5610237	2154
ENSMUSG00000024959	protein_coding	Bad	ENSMUST00000025910	protein_coding	principal3	19	1	6941861	1452
ENSMUSG00000011171	protein_coding	Vipr2	ENSMUST00000176078	retained_intron		12	1	116077726	1821
ENSMUSG00000082692	processed_pseudogene	H2af-ps	ENSMUST00000119066	processed_pseudogene		5	1	35917897	295
ENSMUSG00000030674	protein_coding	Qprt	ENSMUST00000142403	processed_transcript		7	-1	127122018	476
ENSMUSG00000024169	protein_coding	Ift140	ENSMUST00000140692	processed_transcript		17	1	25045517	734
ENSMUSG00000069310	protein_coding	H3c3	ENSMUST00000091752	protein_coding	principal1	13	-1	23745602	630
ENSMUSG00000024231	protein_coding	Cul2	ENSMUST00000080089	nonsense_mediated_decay		18	1	3383225	2799
ENSMUSG00000042148	protein_coding	Cox10	ENSMUST00000125702	processed_transcript		11	-1	64079468	706
ENSMUSG00000024959	protein_coding	Bad	ENSMUST00000113426	protein_coding		19	1	6942323	740
ENSMUSG00000016503	protein_coding	Gtf3a	ENSMUST00000146511	protein_coding	principal5	5	1	146948657	1298
ENSMUSG00000029419	protein_coding	Ajm1	ENSMUST00000191602	protein_coding	principal1	2	-1	25581757	4812
ENSMUSG00000034906	protein_coding	Ncaph	ENSMUST00000110387	protein_coding	principal1	2	-1	127133954	2695
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000176902	protein_coding		18	1	37955139	1835
ENSMUSG00000029419	protein_coding	Ajm1	ENSMUST00000187017	protein_coding		2	-1	25580263	369
ENSMUSG00000024169	protein_coding	Ift140	ENSMUST00000153895	processed_transcript		17	1	25045566	2938
ENSMUSG00000029419	protein_coding	Ajm1	ENSMUST00000188161	protein_coding	principal1	2	-1	25579897	2925
ENSMUSG00000029201	protein_coding	Ugdh	ENSMUST00000125375	retained_intron		5	-1	65425474	6156
ENSMUSG00000024169	protein_coding	Ift140	ENSMUST00000139300	retained_intron		17	1	25090671	908
ENSMUSG00000029201	protein_coding	Ugdh	ENSMUST00000139402	retained_intron		5	-1	65422806	525
ENSMUSG00000045932	protein_coding	Ifit2	ENSMUST00000149829	protein_coding		19	1	34550694	700
ENSMUSG00000029201	protein_coding	Ugdh	ENSMUST00000131263	protein_coding		5	-1	65428387	551
ENSMUSG00000034906	protein_coding	Ncaph	ENSMUST00000152806	retained_intron		2	-1	127114670	2024
ENSMUSG00000106935	processed_pseudogene	Gm19457	ENSMUST00000200995	processed_pseudogene		5	-1	31356795	448
ENSMUSG00000024959	protein_coding	Bad	ENSMUST00000238184	protein_coding	alternative2	19	1	6942463	540
ENSMUSG00000024231	protein_coding	Cul2	ENSMUST00000234843	nonsense_mediated_decay		18	1	3383232	993
ENSMUSG00000066366	protein_coding	Serpina1a	ENSMUST00000072876	protein_coding	alternative2	12	-1	103863555	1581
ENSMUSG00000006204	protein_coding	Cdcp3	ENSMUST00000208921	protein_coding	principal1	7	1	131174421	8578
ENSMUSG00000072618	lincRNA	Gm10384	ENSMUST00000100713	lincRNA		15	-1	36879816	2046
ENSMUSG00000034906	protein_coding	Ncaph	ENSMUST00000175885	nonsense_mediated_decay		2	-1	127133902	2264
ENSMUSG00000006204	protein_coding	Cdcp3	ENSMUST00000128522	protein_coding		7	1	131210253	1051
ENSMUSG00000115430	lincRNA	Gm41300	ENSMUST00000227301	lincRNA		15	-1	36931686	519
ENSMUSG00000074434	protein_coding	Defa28	ENSMUST00000098887	protein_coding	principal1	8	1	21583006	400
ENSMUSG00000016503	protein_coding	Gtf3a	ENSMUST00000133682	retained_intron		5	1	146948698	1970
ENSMUSG00000110159	TEC	Gm45501	ENSMUST00000211468	TEC		7	-1	132840223	2526
ENSMUSG00000045932	protein_coding	Ifit2	ENSMUST00000102826	protein_coding	principal1	19	1	34550710	3818
ENSMUSG00000034906	protein_coding	Ncaph	ENSMUST00000146142	retained_intron		2	-1	127116882	540
ENSMUSG00000024231	protein_coding	Cul2	ENSMUST00000162301	protein_coding	principal1	18	1	3383232	3828
ENSMUSG00000034906	protein_coding	Ncaph	ENSMUST00000177191	retained_intron		2	-1	127122050	426
ENSMUSG00000034906	protein_coding	Ncaph	ENSMUST00000156625	processed_transcript		2	-1	127133897	283
ENSMUSG00000024959	protein_coding	Bad	ENSMUST00000113423	protein_coding	alternative2	19	1	6942501	990
ENSMUSG00000115333	lincRNA	Gm34590	ENSMUST00000227227	lincRNA		15	1	36938864	962
ENSMUSG00000066366	protein_coding	Serpina1a	ENSMUST00000085056	protein_coding	principal3	12	-1	103863551	1360
ENSMUSG00000024959	protein_coding	Bad	ENSMUST00000237334	protein_coding		19	1	6942522	1533
ENSMUSG00000106866	processed_pseudogene	Gm43659	ENSMUST00000200894	processed_pseudogene		5	1	31450824	628
ENSMUSG00000086814	antisense	Gm15677	ENSMUST00000152302	antisense		7	1	132154171	766
ENSMUSG00000076530	IG_V_pseudogene	Igkv11-106	ENSMUST00000103331	IG_V_pseudogene		6	1	68339527	346
ENSMUSG00000100441	processed_pseudogene	Gm7266	ENSMUST00000187999	processed_pseudogene		1	-1	144312436	405
ENSMUSG00000024959	protein_coding	Bad	ENSMUST00000235240	protein_coding	alternative2	19	1	6942564	1169
ENSMUSG00000108989	processed_pseudogene	Gm44984	ENSMUST00000207802	processed_pseudogene		7	-1	131472867	394
ENSMUSG00000024231	protein_coding	Cul2	ENSMUST00000161317	protein_coding		18	1	3383257	1909
ENSMUSG00000009210	protein_coding	Prr29	ENSMUST00000106816	protein_coding	principal2	11	1	106374826	771
ENSMUSG00000106950	TEC	4930478M09Rik	ENSMUST00000201366	TEC		5	-1	31452331	1113
ENSMUSG00000066366	protein_coding	Serpina1a	ENSMUST00000124717	protein_coding		12	-1	103863562	578
ENSMUSG00000109815	processed_pseudogene	Gm7082	ENSMUST00000209880	processed_pseudogene		8	1	40016714	969
ENSMUSG00000024231	protein_coding	Cul2	ENSMUST00000234414	nonsense_mediated_decay		18	1	3383311	618
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000176104	protein_coding	principal1	18	1	37955147	2150
ENSMUSG00000016503	protein_coding	Gtf3a	ENSMUST00000132102	protein_coding	alternative2	5	1	146948705	1426
ENSMUSG00000106066	IG_V_pseudogene	Igkv2-105	ENSMUST00000196931	IG_V_pseudogene		6	1	68348647	377
ENSMUSG00000009210	protein_coding	Prr29	ENSMUST00000188561	protein_coding	alternative2	11	1	106374845	592
ENSMUSG00000024959	protein_coding	Bad	ENSMUST00000141410	protein_coding		19	1	6942879	663
ENSMUSG00000024231	protein_coding	Cul2	ENSMUST00000159443	retained_intron		18	1	3433884	397
ENSMUSG00000084041	processed_pseudogene	Gm15312	ENSMUST00000118827	processed_pseudogene		8	1	21592341	271
ENSMUSG00000009210	protein_coding	Prr29	ENSMUST00000190795	protein_coding		11	1	106374845	822
ENSMUSG00000069196	processed_pseudogene	Gm10161	ENSMUST00000091506	processed_pseudogene		7	1	75366055	204
ENSMUSG00000100109	unprocessed_pseudogene	Gm29366	ENSMUST00000190481	unprocessed_pseudogene		Y	-1	9231360	699
ENSMUSG00000009210	protein_coding	Prr29	ENSMUST00000185986	protein_coding	alternative2	11	1	106374845	983
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000236964	retained_intron		19	-1	5609782	1960
ENSMUSG00000049235	protein_coding	Gm7324	ENSMUST00000228507	protein_coding		14	1	43697828	660
ENSMUSG00000016503	protein_coding	Gtf3a	ENSMUST00000133296	retained_intron		5	1	146950007	1678
ENSMUSG00000009210	protein_coding	Prr29	ENSMUST00000190268	protein_coding	alternative2	11	1	106374845	1141
ENSMUSG00000100848	processed_pseudogene	Gm29281	ENSMUST00000188077	processed_pseudogene		Y	-1	9244489	381
ENSMUSG00000024959	protein_coding	Bad	ENSMUST00000237244	retained_intron		19	1	6950475	1107
ENSMUSG00000100105	unprocessed_pseudogene	Gm29330	ENSMUST00000190032	unprocessed_pseudogene		Y	-1	9268263	699
ENSMUSG00000024959	protein_coding	Bad	ENSMUST00000145463	protein_coding		19	1	6950767	668
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000235701	protein_coding	alternative1	19	-1	5610048	1905
ENSMUSG00000105487	processed_pseudogene	Gm43324	ENSMUST00000197482	processed_pseudogene		5	-1	6646808	289
ENSMUSG00000049235	protein_coding	Gm7324	ENSMUST00000094051	protein_coding	principal1	14	1	43713732	1647
ENSMUSG00000114905	processed_pseudogene	Gm48113	ENSMUST00000224298	processed_pseudogene		13	-1	81725028	1039
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000236229	protein_coding	alternative1	19	-1	5610029	1386
ENSMUSG00000091990	unprocessed_pseudogene	Gm9672	ENSMUST00000166437	unprocessed_pseudogene		14	-1	43702426	425
ENSMUSG00000091216	processed_pseudogene	Gm17208	ENSMUST00000168388	processed_pseudogene		14	1	43713383	535
ENSMUSG00000095002	protein_coding	Olfr798	ENSMUST00000204979	protein_coding	principal1	10	-1	129627934	3590
ENSMUSG00000039759	protein_coding	Thap3	ENSMUST00000036680	protein_coding	principal3	4	-1	151988997	1124
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000162466	protein_coding		8	-1	104534636	1735
ENSMUSG00000101095	lincRNA	Gm29329	ENSMUST00000189053	lincRNA		Y	1	9307879	621
ENSMUSG00000039196	protein_coding	Orm1	ENSMUST00000030044	protein_coding	principal1	4	1	63344560	775
ENSMUSG00000041028	protein_coding	Ghitm	ENSMUST00000165649	protein_coding	principal1	14	-1	37135252	3188
ENSMUSG00000095002	protein_coding	Olfr798	ENSMUST00000079810	protein_coding	principal1	10	-1	129626059	936
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000112428	protein_coding		6	1	125009238	3132
ENSMUSG00000106532	processed_pseudogene	Gm5714	ENSMUST00000197343	processed_pseudogene		5	-1	6749457	566
ENSMUSG00000051098	protein_coding	Mblac2	ENSMUST00000057598	protein_coding	principal1	13	1	81711341	3957
ENSMUSG00000098509	protein_coding	Rgs21	ENSMUST00000184008	processed_transcript		1	-1	144567667	3792
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000235788	retained_intron		19	-1	5610044	1429
ENSMUSG00000032410	protein_coding	Xrn1	ENSMUST00000185633	protein_coding	alternative2	9	1	95954767	10256
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000235796	protein_coding		19	-1	5608270	471
ENSMUSG00000022752	protein_coding	Tomm70a	ENSMUST00000166897	protein_coding	principal1	16	1	57121703	5964
ENSMUSG00000039759	protein_coding	Thap3	ENSMUST00000105665	protein_coding	alternative2	4	-1	151988970	832
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000144308	processed_transcript		6	1	125009276	1864
ENSMUSG00000091541	protein_coding	Vmn1r9	ENSMUST00000228714	protein_coding	principal1	6	1	57066787	4573
ENSMUSG00000041028	protein_coding	Ghitm	ENSMUST00000042564	protein_coding	principal1	14	-1	37135139	2573
ENSMUSG00000054141	protein_coding	Olfr24	ENSMUST00000214366	processed_transcript		9	-1	18763986	3505
ENSMUSG00000032410	protein_coding	Xrn1	ENSMUST00000189106	protein_coding		9	1	95954793	357
ENSMUSG00000098509	protein_coding	Rgs21	ENSMUST00000184189	protein_coding	principal1	1	-1	144551564	1674
ENSMUSG00000094773	protein_coding	Gm21812	ENSMUST00000188908	protein_coding	principal1	Y	-1	9347184	1224
ENSMUSG00000051098	protein_coding	Mblac2	ENSMUST00000224299	protein_coding		13	1	81711530	676
ENSMUSG00000094773	protein_coding	Gm21812	ENSMUST00000179590	protein_coding	principal1	Y	-1	9345654	684
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000236729	processed_transcript		19	-1	5609789	822
ENSMUSG00000022752	protein_coding	Tomm70a	ENSMUST00000231298	retained_intron		16	1	57137498	4170
ENSMUSG00000091541	protein_coding	Vmn1r9	ENSMUST00000227399	protein_coding	principal1	6	1	57066787	6778
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000034349	protein_coding	principal1	8	-1	104534637	1808
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000236062	retained_intron		19	-1	5609707	805
ENSMUSG00000054141	protein_coding	Olfr24	ENSMUST00000216754	protein_coding	principal1	9	-1	18763996	4327
ENSMUSG00000022752	protein_coding	Tomm70a	ENSMUST00000231901	processed_transcript		16	1	57153260	429
ENSMUSG00000039759	protein_coding	Thap3	ENSMUST00000146471	retained_intron		4	-1	151988980	501
ENSMUSG00000041028	protein_coding	Ghitm	ENSMUST00000224769	protein_coding		14	-1	37135254	1102
ENSMUSG00000091541	protein_coding	Vmn1r9	ENSMUST00000171186	protein_coding	principal1	6	1	57070895	1051
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000236259	retained_intron		19	-1	5609918	682
ENSMUSG00000108605	polymorphic_pseudogene	Olfr396-ps1	ENSMUST00000143750	polymorphic_pseudogene		11	1	73925002	1675
ENSMUSG00000091718	protein_coding	Gm16506	ENSMUST00000165553	protein_coding	principal1	14	-1	43727485	1405
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000161411	retained_intron		8	-1	104516989	669
ENSMUSG00000024926	protein_coding	Kat5	ENSMUST00000236264	protein_coding		19	-1	5610051	366
ENSMUSG00000108605	polymorphic_pseudogene	Olfr396-ps1	ENSMUST00000205791	protein_coding	principal1	11	1	73928226	633
ENSMUSG00000115394	unprocessed_pseudogene	Gm49078	ENSMUST00000227376	unprocessed_pseudogene		14	1	43730063	439
ENSMUSG00000041028	protein_coding	Ghitm	ENSMUST00000223921	retained_intron		14	-1	37135272	601
ENSMUSG00000031603	protein_coding	Fgf20	ENSMUST00000034014	protein_coding	principal1	8	-1	40286953	1476
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000159330	retained_intron		8	-1	104518043	713
ENSMUSG00000075576	antisense	Gm12359	ENSMUST00000153181	antisense		11	-1	98810087	680
ENSMUSG00000054141	protein_coding	Olfr24	ENSMUST00000066997	protein_coding	principal1	9	-1	18755709	1157
ENSMUSG00000099948	unprocessed_pseudogene	Gm29424	ENSMUST00000189716	unprocessed_pseudogene		Y	-1	70338622	696
ENSMUSG00000115181	protein_coding	Vmn1r10	ENSMUST00000228270	protein_coding	principal1	6	1	57109454	2084
ENSMUSG00000108590	processed_pseudogene	Gm44962	ENSMUST00000206460	processed_pseudogene		7	-1	75421135	279
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000160148	retained_intron		8	-1	104517049	660
ENSMUSG00000075576	antisense	Gm12359	ENSMUST00000139017	antisense		11	-1	98810087	1399
ENSMUSG00000031603	protein_coding	Fgf20	ENSMUST00000118639	protein_coding		8	-1	40308331	587
ENSMUSG00000104442	TEC	4932431L22Rik	ENSMUST00000193456	TEC		Y	1	70367444	3140
ENSMUSG00000115181	protein_coding	Vmn1r10	ENSMUST00000176073	protein_coding	principal1	6	1	57113425	936
ENSMUSG00000082272	processed_pseudogene	Gm11675	ENSMUST00000121873	processed_pseudogene		11	1	111276100	832
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000112427	protein_coding	principal2	6	1	125009283	3072
ENSMUSG00000098897	processed_pseudogene	Gm19013	ENSMUST00000183895	processed_pseudogene		14	-1	25940580	1222
ENSMUSG00000011171	protein_coding	Vipr2	ENSMUST00000011315	protein_coding	principal1	12	1	116077728	3383
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000131555	processed_transcript		6	1	125009713	719
ENSMUSG00000106738	lincRNA	Gm5	ENSMUST00000202386	lincRNA		5	-1	150502133	420
ENSMUSG00000069816	protein_coding	Olfr23	ENSMUST00000214210	protein_coding	principal1	11	1	73936677	2527
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000070709	protein_coding	principal1	18	1	37955559	1767
ENSMUSG00000075576	antisense	Gm12359	ENSMUST00000141696	antisense		11	-1	98810058	713
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000152752	protein_coding		6	1	125009715	628
ENSMUSG00000095975	protein_coding	Cphx1	ENSMUST00000183436	processed_transcript		14	1	25938304	365
ENSMUSG00000069816	protein_coding	Olfr23	ENSMUST00000092917	protein_coding	principal1	11	1	73940248	978
ENSMUSG00000115236	protein_coding	Vmn1r11	ENSMUST00000226968	protein_coding	principal2	6	1	57133455	2522
ENSMUSG00000011171	protein_coding	Vipr2	ENSMUST00000100988	processed_transcript		12	1	116077760	514
ENSMUSG00000009376	protein_coding	Met	ENSMUST00000115443	protein_coding	principal1	6	1	17463800	6809
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000088308	protein_coding	principal2	6	1	125009735	2875
ENSMUSG00000115236	protein_coding	Vmn1r11	ENSMUST00000228235	protein_coding	alternative2	6	1	57133455	2376
ENSMUSG00000106738	lincRNA	Gm5	ENSMUST00000202066	lincRNA		5	-1	150502304	486
ENSMUSG00000011171	protein_coding	Vipr2	ENSMUST00000175785	processed_transcript		12	1	116077766	426
ENSMUSG00000009376	protein_coding	Met	ENSMUST00000140070	protein_coding		6	1	17463827	884
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000112425	protein_coding		6	1	125009736	2691
ENSMUSG00000011171	protein_coding	Vipr2	ENSMUST00000177199	processed_transcript		12	1	116077773	811
ENSMUSG00000009376	protein_coding	Met	ENSMUST00000115442	protein_coding	principal1	6	1	17464038	4663
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000177058	protein_coding	principal1	18	1	37955563	1762
ENSMUSG00000115236	protein_coding	Vmn1r11	ENSMUST00000071304	protein_coding	principal2	6	1	57137353	900
ENSMUSG00000011171	protein_coding	Vipr2	ENSMUST00000176433	protein_coding		12	1	116137347	434
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000140835	retained_intron		6	1	125009745	2470
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000169360	protein_coding		18	1	37955588	801
ENSMUSG00000026715	protein_coding	Serpinc1	ENSMUST00000064725	protein_coding	principal1	1	1	160978646	4970
ENSMUSG00000095975	protein_coding	Cphx1	ENSMUST00000184016	protein_coding	principal1	14	1	25942539	1649
ENSMUSG00000057981	protein_coding	Vmn1r12	ENSMUST00000226866	protein_coding	principal2	6	1	57156919	6639
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000163591	protein_coding		18	1	37955589	1057
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000084275	protein_coding	principal2	6	1	125009805	2829
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000160913	retained_intron		8	-1	104527915	3559
ENSMUSG00000057981	protein_coding	Vmn1r12	ENSMUST00000227581	protein_coding	alternative2	6	1	57156920	6490
ENSMUSG00000095975	protein_coding	Cphx1	ENSMUST00000061593	retained_intron		14	1	25951808	570
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000091932	protein_coding		18	1	37955624	1995
ENSMUSG00000093765	antisense	Gm20658	ENSMUST00000175871	antisense		12	-1	116138521	1489
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000112424	protein_coding	alternative2	6	1	125010392	2673
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000212514	retained_intron		8	-1	104527282	732
ENSMUSG00000026715	protein_coding	Serpinc1	ENSMUST00000191936	protein_coding		1	1	160978652	725
ENSMUSG00000095975	protein_coding	Cphx1	ENSMUST00000183557	retained_intron		14	1	25954668	480
ENSMUSG00000057981	protein_coding	Vmn1r12	ENSMUST00000073384	protein_coding	principal2	6	1	57158920	924
ENSMUSG00000009376	protein_coding	Met	ENSMUST00000145473	retained_intron		6	1	17464107	3541
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000169498	protein_coding		18	1	37955704	832
ENSMUSG00000009376	protein_coding	Met	ENSMUST00000152802	protein_coding		6	1	17535001	683
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000159696	retained_intron		8	-1	104523213	605
ENSMUSG00000026715	protein_coding	Serpinc1	ENSMUST00000195760	protein_coding		1	1	160978688	360
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000145566	retained_intron		6	1	125024787	2438
ENSMUSG00000093728	unprocessed_pseudogene	Vmn1r-ps8	ENSMUST00000177200	unprocessed_pseudogene		6	1	57188507	838
ENSMUSG00000009376	protein_coding	Met	ENSMUST00000148903	protein_coding		6	1	17546973	470
ENSMUSG00000049134	protein_coding	Nrap	ENSMUST00000073536	protein_coding	principal4	19	-1	56390037	5501
ENSMUSG00000026715	protein_coding	Serpinc1	ENSMUST00000194592	protein_coding		1	1	160984768	1044
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000137325	retained_intron		6	1	125030404	3200
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000235611	processed_transcript		18	1	37955740	605
ENSMUSG00000037822	protein_coding	Smim14	ENSMUST00000139122	protein_coding	principal1	5	-1	65493400	4560
ENSMUSG00000082141	unprocessed_pseudogene	Gm11212	ENSMUST00000118337	unprocessed_pseudogene		4	1	63350411	618
ENSMUSG00000093765	antisense	Gm20658	ENSMUST00000177059	antisense		12	-1	116138648	1950
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000237652	processed_transcript		18	1	37955814	732
ENSMUSG00000038346	protein_coding	Zfp384	ENSMUST00000046064	protein_coding		6	1	125009669	3108
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000164499	retained_intron		18	1	37956693	514
ENSMUSG00000009376	protein_coding	Met	ENSMUST00000080469	protein_coding	principal1	6	1	17491241	4140
ENSMUSG00000037822	protein_coding	Smim14	ENSMUST00000121661	protein_coding	principal1	5	-1	65493060	1056
ENSMUSG00000038172	protein_coding	Ttc39b	ENSMUST00000102823	protein_coding	principal2	4	-1	83324255	8831
ENSMUSG00000026715	protein_coding	Serpinc1	ENSMUST00000194777	retained_intron		1	1	160987087	867
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000159393	retained_intron		8	-1	104534608	3974
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000166531	retained_intron		18	1	37956734	733
ENSMUSG00000044024	protein_coding	Rell2	ENSMUST00000236289	retained_intron		18	1	37956813	729
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000161474	retained_intron		8	-1	104527334	777
ENSMUSG00000026715	protein_coding	Serpinc1	ENSMUST00000194455	nonsense_mediated_decay		1	1	160989377	742
ENSMUSG00000064259	protein_coding	Vmn1r13	ENSMUST00000226892	protein_coding	principal1	6	1	57203290	5156
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000213067	retained_intron		8	-1	104528247	1574
ENSMUSG00000037822	protein_coding	Smim14	ENSMUST00000040532	nonsense_mediated_decay		5	-1	65492871	1177
ENSMUSG00000049134	protein_coding	Nrap	ENSMUST00000040711	protein_coding	alternative2	19	-1	56390035	5334
ENSMUSG00000087150	transcribed_unprocessed_pseudogene	BC064078	ENSMUST00000131176	processed_transcript		6	1	128992952	2299
ENSMUSG00000064259	protein_coding	Vmn1r13	ENSMUST00000227421	protein_coding	principal1	6	1	57203290	5235
ENSMUSG00000040167	protein_coding	Ikzf5	ENSMUST00000046306	protein_coding	principal1	7	-1	131410521	4430
ENSMUSG00000087150	transcribed_unprocessed_pseudogene	BC064078	ENSMUST00000122939	transcribed_unprocessed_pseudogene		6	1	128993040	570
ENSMUSG00000108034	antisense	4930557K07Rik	ENSMUST00000205110	antisense		6	-1	125049851	363
ENSMUSG00000038172	protein_coding	Ttc39b	ENSMUST00000143362	retained_intron		4	-1	83233170	1383
ENSMUSG00000064259	protein_coding	Vmn1r13	ENSMUST00000227298	protein_coding	principal1	6	1	57206512	5203
ENSMUSG00000031878	protein_coding	Nae1	ENSMUST00000159702	retained_intron		8	-1	104534614	456
ENSMUSG00000101099	lincRNA	Gm29191	ENSMUST00000185427	lincRNA		Y	1	33163600	621
ENSMUSG00000101099	lincRNA	Gm29191	ENSMUST00000188742	lincRNA		Y	1	33163600	437
ENSMUSG00000064259	protein_coding	Vmn1r13	ENSMUST00000078885	protein_coding	principal1	6	1	57209858	903
ENSMUSG00000037822	protein_coding	Smim14	ENSMUST00000135258	retained_intron		5	-1	65461303	1434
ENSMUSG00000040167	protein_coding	Ikzf5	ENSMUST00000121033	protein_coding		7	-1	131410497	2231
ENSMUSG00000091887	processed_pseudogene	Gm17053	ENSMUST00000163501	processed_pseudogene		12	-1	106546326	495
ENSMUSG00000038172	protein_coding	Ttc39b	ENSMUST00000048274	protein_coding	alternative2	4	-1	83324239	1804
ENSMUSG00000037822	protein_coding	Smim14	ENSMUST00000200111	retained_intron		5	-1	65458511	5492
ENSMUSG00000040167	protein_coding	Ikzf5	ENSMUST00000208966	retained_intron		7	-1	131393657	2470
ENSMUSG00000026357	protein_coding	Rgs18	ENSMUST00000027603	protein_coding	principal1	1	-1	144775435	2031
ENSMUSG00000049134	protein_coding	Nrap	ENSMUST00000095947	protein_coding		19	-1	56390035	5214
ENSMUSG00000037822	protein_coding	Smim14	ENSMUST00000149167	protein_coding		5	-1	65537184	520
ENSMUSG00000040167	protein_coding	Ikzf5	ENSMUST00000154602	protein_coding		7	-1	131410378	487
ENSMUSG00000095049	unprocessed_pseudogene	Gm21756	ENSMUST00000178380	unprocessed_pseudogene		Y	1	33245018	930
ENSMUSG00000090336	protein_coding	Cfap97d2	ENSMUST00000166277	protein_coding	principal2	8	1	13705889	799
ENSMUSG00000049134	protein_coding	Nrap	ENSMUST00000169099	nonsense_mediated_decay		19	-1	56379865	2517
ENSMUSG00000040167	protein_coding	Ikzf5	ENSMUST00000207243	protein_coding		7	-1	131410473	526
ENSMUSG00000115675	unprocessed_pseudogene	Gm49080	ENSMUST00000228192	unprocessed_pseudogene		14	1	43736459	202
ENSMUSG00000083305	processed_pseudogene	Gm13315	ENSMUST00000120376	processed_pseudogene		2	1	14721134	991
ENSMUSG00000038172	protein_coding	Ttc39b	ENSMUST00000146519	processed_transcript		4	-1	83266039	623
ENSMUSG00000037822	protein_coding	Smim14	ENSMUST00000125954	retained_intron		5	-1	65537129	2493
ENSMUSG00000104034	TEC	2900092N22Rik	ENSMUST00000193601	TEC		2	1	14673404	1409
ENSMUSG00000114982	protein_coding	Vmn1r14	ENSMUST00000227884	protein_coding	principal2	6	1	57231686	7542
ENSMUSG00000049134	protein_coding	Nrap	ENSMUST00000166203	protein_coding	alternative2	19	-1	56389877	5079
ENSMUSG00000101601	lincRNA	Gm28210	ENSMUST00000190631	lincRNA		Y	1	33289865	166
ENSMUSG00000040167	protein_coding	Ikzf5	ENSMUST00000128432	protein_coding		7	-1	131410495	714
ENSMUSG00000114982	protein_coding	Vmn1r14	ENSMUST00000227574	protein_coding	alternative2	6	1	57231686	7394
ENSMUSG00000089728	protein_coding	Clec2f	ENSMUST00000204981	protein_coding	principal1	6	1	129014112	657
ENSMUSG00000090336	protein_coding	Cfap97d2	ENSMUST00000209042	processed_transcript		8	1	13705902	730
ENSMUSG00000037822	protein_coding	Smim14	ENSMUST00000144562	retained_intron		5	-1	65492881	350
ENSMUSG00000090336	protein_coding	Cfap97d2	ENSMUST00000214337	protein_coding	alternative2	8	1	13705967	1212
ENSMUSG00000040167	protein_coding	Ikzf5	ENSMUST00000142349	protein_coding		7	-1	131410405	278
ENSMUSG00000114982	protein_coding	Vmn1r14	ENSMUST00000227209	protein_coding	alternative2	6	1	57231686	6857
ENSMUSG00000081935	unprocessed_pseudogene	Gm16186	ENSMUST00000120132	unprocessed_pseudogene		6	-1	129031676	216
ENSMUSG00000037822	protein_coding	Smim14	ENSMUST00000198981	retained_intron		5	-1	65493400	3456
ENSMUSG00000114982	protein_coding	Vmn1r14	ENSMUST00000227768	protein_coding	principal2	6	1	57231686	7005
ENSMUSG00000105867	protein_coding	Gm42517	ENSMUST00000197216	protein_coding	principal1	5	-1	108367922	1850
ENSMUSG00000038172	protein_coding	Ttc39b	ENSMUST00000150522	protein_coding		4	-1	83285169	814
ENSMUSG00000090336	protein_coding	Cfap97d2	ENSMUST00000208283	processed_transcript		8	1	13708285	3295
ENSMUSG00000026429	protein_coding	Ube2t	ENSMUST00000027687	protein_coding	principal1	1	1	134962565	1116
ENSMUSG00000101516	lincRNA	Gm29074	ENSMUST00000188026	lincRNA		Y	1	33321745	1493
ENSMUSG00000114982	protein_coding	Vmn1r14	ENSMUST00000177435	protein_coding	principal2	6	1	57233439	912
ENSMUSG00000072769	lincRNA	Gm10419	ENSMUST00000197854	lincRNA		5	1	108367769	653
ENSMUSG00000038172	protein_coding	Ttc39b	ENSMUST00000030205	protein_coding		4	-1	83324189	842
ENSMUSG00000038172	protein_coding	Ttc39b	ENSMUST00000148811	protein_coding		4	-1	83279407	727
ENSMUSG00000026429	protein_coding	Ube2t	ENSMUST00000185369	retained_intron		1	1	134962591	3244
ENSMUSG00000032410	protein_coding	Xrn1	ENSMUST00000189612	retained_intron		9	1	95954832	3357
ENSMUSG00000090990	antisense	Gm17197	ENSMUST00000163160	antisense		19	1	56364262	452
ENSMUSG00000079497	protein_coding	Gm13420	ENSMUST00000129574	protein_coding	principal1	2	-1	29751685	1091
ENSMUSG00000101516	lincRNA	Gm29074	ENSMUST00000185455	lincRNA		Y	1	33322198	431
ENSMUSG00000021537	protein_coding	Cetn3	ENSMUST00000022009	protein_coding	principal1	13	1	81783077	1226
ENSMUSG00000101516	lincRNA	Gm29074	ENSMUST00000187907	lincRNA		Y	1	33322198	612
ENSMUSG00000087086	antisense	Gm13269	ENSMUST00000143458	antisense		2	-1	14763479	655
ENSMUSG00000108496	processed_pseudogene	Gm44768	ENSMUST00000205719	processed_pseudogene		6	-1	71672678	393
ENSMUSG00000101359	unprocessed_pseudogene	Gm28211	ENSMUST00000190920	unprocessed_pseudogene		Y	1	33337241	315
ENSMUSG00000048279	protein_coding	Sacs	ENSMUST00000089394	protein_coding	principal2	14	1	61138457	3345
ENSMUSG00000071303	processed_pseudogene	Rps8-ps1	ENSMUST00000172445	processed_pseudogene		10	-1	56355074	624
ENSMUSG00000087086	antisense	Gm13269	ENSMUST00000147019	antisense		2	-1	14767024	548
ENSMUSG00000072769	lincRNA	Gm10419	ENSMUST00000196693	lincRNA		5	1	108367791	2530
ENSMUSG00000083633	processed_pseudogene	Gm13312	ENSMUST00000119631	processed_pseudogene		2	1	14672255	718
ENSMUSG00000026429	protein_coding	Ube2t	ENSMUST00000223886	nonsense_mediated_decay		1	1	134962618	1046
ENSMUSG00000072769	lincRNA	Gm10419	ENSMUST00000198585	lincRNA		5	1	108368236	4059
ENSMUSG00000078676	protein_coding	Casc3	ENSMUST00000017384	protein_coding	principal1	11	1	98804905	3963
ENSMUSG00000085281	processed_pseudogene	Gm13316	ENSMUST00000140537	processed_pseudogene		2	-1	14812538	691
ENSMUSG00000022751	protein_coding	Nit2	ENSMUST00000023432	protein_coding	principal1	16	-1	57167332	1286
ENSMUSG00000074825	protein_coding	Itpripl1	ENSMUST00000132773	protein_coding		2	-1	127143442	3424
ENSMUSG00000026429	protein_coding	Ube2t	ENSMUST00000188177	protein_coding		1	1	134971279	437
ENSMUSG00000103885	TEC	Gm37006	ENSMUST00000195253	TEC		2	1	14707665	2674
ENSMUSG00000026429	protein_coding	Ube2t	ENSMUST00000139617	retained_intron		1	1	134971956	796
ENSMUSG00000078676	protein_coding	Casc3	ENSMUST00000144220	processed_transcript		11	1	98810150	368
ENSMUSG00000015755	protein_coding	Tab2	ENSMUST00000130322	protein_coding		10	-1	7924260	2311
ENSMUSG00000103050	TEC	Gm38273	ENSMUST00000194987	TEC		2	-1	14737927	2382
ENSMUSG00000056749	protein_coding	Nfil3	ENSMUST00000071065	protein_coding	principal1	13	-1	52981073	2026
ENSMUSG00000070271	processed_pseudogene	Gm13268	ENSMUST00000117485	processed_pseudogene		2	-1	14627321	433
ENSMUSG00000048279	protein_coding	Sacs	ENSMUST00000227570	nonsense_mediated_decay		14	1	61138491	3884
ENSMUSG00000072769	lincRNA	Gm10419	ENSMUST00000100944	lincRNA		5	1	108369858	1671
ENSMUSG00000032410	protein_coding	Xrn1	ENSMUST00000187175	retained_intron		9	1	95954859	6235
ENSMUSG00000021537	protein_coding	Cetn3	ENSMUST00000223793	protein_coding		13	1	81783278	387
ENSMUSG00000022751	protein_coding	Nit2	ENSMUST00000231733	protein_coding		16	-1	57163794	1181
ENSMUSG00000078676	protein_coding	Casc3	ENSMUST00000147065	processed_transcript		11	1	98810161	605
ENSMUSG00000032410	protein_coding	Xrn1	ENSMUST00000190665	protein_coding	alternative2	9	1	95954862	3093
ENSMUSG00000072769	lincRNA	Gm10419	ENSMUST00000199724	lincRNA		5	1	108370862	653
ENSMUSG00000104106	antisense	Gm10848	ENSMUST00000192361	antisense		2	-1	14739722	1811
ENSMUSG00000094734	protein_coding	Olfr799	ENSMUST00000214182	protein_coding	principal1	10	1	129637484	1694
ENSMUSG00000048279	protein_coding	Sacs	ENSMUST00000119509	protein_coding	alternative2	14	1	61147721	3468
ENSMUSG00000037411	protein_coding	Serpine1	ENSMUST00000041388	protein_coding	principal1	5	-1	137072259	3011
ENSMUSG00000074825	protein_coding	Itpripl1	ENSMUST00000110386	protein_coding	principal1	2	-1	127143306	1898
ENSMUSG00000032410	protein_coding	Xrn1	ENSMUST00000185759	retained_intron		9	1	95971745	3615
ENSMUSG00000104271	TEC	Gm37891	ENSMUST00000195585	TEC		2	1	14966198	1326
ENSMUSG00000094734	protein_coding	Olfr799	ENSMUST00000217364	protein_coding	principal1	10	1	129637484	1580
ENSMUSG00000020227	protein_coding	Irak3	ENSMUST00000020448	protein_coding	principal1	10	-1	120201659	3097
ENSMUSG00000021537	protein_coding	Cetn3	ENSMUST00000224574	protein_coding		13	1	81783523	628
ENSMUSG00000104153	TEC	Gm38105	ENSMUST00000192112	TEC		2	1	14611217	2621
ENSMUSG00000094734	protein_coding	Olfr799	ENSMUST00000216446	protein_coding	principal1	10	1	129637484	1513
ENSMUSG00000078676	protein_coding	Casc3	ENSMUST00000169695	protein_coding	principal1	11	1	98809808	3741
ENSMUSG00000091583	lincRNA	Gm17033	ENSMUST00000146663	lincRNA		12	1	106558750	593
ENSMUSG00000094734	protein_coding	Olfr799	ENSMUST00000213820	protein_coding	principal1	10	1	129637484	1627
ENSMUSG00000102673	TEC	Gm37437	ENSMUST00000194451	TEC		2	1	14944908	1937
ENSMUSG00000037411	protein_coding	Serpine1	ENSMUST00000199832	retained_intron		5	-1	137072268	1268
ENSMUSG00000022751	protein_coding	Nit2	ENSMUST00000231855	retained_intron		16	-1	57160769	1220
ENSMUSG00000021537	protein_coding	Cetn3	ENSMUST00000224433	nonsense_mediated_decay		13	1	81783831	598
ENSMUSG00000082542	processed_pseudogene	Gm13311	ENSMUST00000117863	processed_pseudogene		2	-1	14693249	379
ENSMUSG00000032410	protein_coding	Xrn1	ENSMUST00000189806	retained_intron		9	1	95973517	844
ENSMUSG00000020227	protein_coding	Irak3	ENSMUST00000145665	protein_coding		10	-1	120202130	2869
ENSMUSG00000094734	protein_coding	Olfr799	ENSMUST00000071126	protein_coding	principal1	10	1	129647130	936
ENSMUSG00000021537	protein_coding	Cetn3	ENSMUST00000226007	protein_coding		13	1	81784387	697
ENSMUSG00000032410	protein_coding	Xrn1	ENSMUST00000187359	retained_intron		9	1	96017463	3046
ENSMUSG00000022751	protein_coding	Nit2	ENSMUST00000231423	nonsense_mediated_decay		16	-1	57164207	749
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000193730	retained_intron		2	1	14603088	1526
ENSMUSG00000074825	protein_coding	Itpripl1	ENSMUST00000154021	protein_coding	principal1	2	-1	127142590	1753
ENSMUSG00000021537	protein_coding	Cetn3	ENSMUST00000224705	protein_coding		13	1	81784707	769
ENSMUSG00000037411	protein_coding	Serpine1	ENSMUST00000077523	protein_coding	principal1	5	-1	137072254	2697
ENSMUSG00000022751	protein_coding	Nit2	ENSMUST00000231934	nonsense_mediated_decay		16	-1	57163764	689
ENSMUSG00000020227	protein_coding	Irak3	ENSMUST00000135106	nonsense_mediated_decay		10	-1	120201498	2473
ENSMUSG00000092617	processed_pseudogene	Gm8412	ENSMUST00000077493	processed_pseudogene		19	1	27858058	440
ENSMUSG00000039478	protein_coding	Micu3	ENSMUST00000068999	protein_coding	principal1	8	1	40307458	2219
ENSMUSG00000048279	protein_coding	Sacs	ENSMUST00000119943	protein_coding	alternative2	14	1	61148052	14991
ENSMUSG00000021537	protein_coding	Cetn3	ENSMUST00000223858	retained_intron		13	1	81791882	529
ENSMUSG00000022751	protein_coding	Nit2	ENSMUST00000232662	retained_intron		16	-1	57160141	352
ENSMUSG00000048279	protein_coding	Sacs	ENSMUST00000121091	protein_coding	alternative2	14	1	61172990	4581
ENSMUSG00000075567	protein_coding	Krtap1-4	ENSMUST00000100479	protein_coding	principal1	11	-1	99583654	593
ENSMUSG00000022751	protein_coding	Nit2	ENSMUST00000232573	retained_intron		16	-1	57167341	365
ENSMUSG00000039478	protein_coding	Micu3	ENSMUST00000136835	protein_coding		8	1	40354303	2488
ENSMUSG00000048279	protein_coding	Sacs	ENSMUST00000150222	retained_intron		14	1	61188807	4752
ENSMUSG00000032410	protein_coding	Xrn1	ENSMUST00000034981	protein_coding	principal3	9	1	95954760	5499
ENSMUSG00000020227	protein_coding	Irak3	ENSMUST00000140237	processed_transcript		10	-1	120170378	635
ENSMUSG00000048279	protein_coding	Sacs	ENSMUST00000229692	protein_coding		14	1	61193473	42
ENSMUSG00000021537	protein_coding	Cetn3	ENSMUST00000224168	protein_coding		13	1	81791977	876
ENSMUSG00000039478	protein_coding	Micu3	ENSMUST00000132481	retained_intron		8	1	40357122	2481
ENSMUSG00000078131	protein_coding	Krtap1-3	ENSMUST00000104930	protein_coding	principal1	11	-1	99591339	879
ENSMUSG00000097793	antisense	Gm17259	ENSMUST00000181520	antisense		13	-1	81783749	4608
ENSMUSG00000020227	protein_coding	Irak3	ENSMUST00000143100	retained_intron		10	-1	120201587	1171
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000155633	protein_coding	alternative2	16	1	10545364	6213
ENSMUSG00000097777	antisense	Gm16794	ENSMUST00000180727	antisense		9	-1	95959393	2100
ENSMUSG00000091307	unprocessed_pseudogene	Gm8895	ENSMUST00000172300	unprocessed_pseudogene		12	-1	103881511	1223
ENSMUSG00000030960	protein_coding	Eef1akmt2	ENSMUST00000033257	protein_coding	principal1	7	-1	132852673	1107
ENSMUSG00000097777	antisense	Gm16794	ENSMUST00000188854	antisense		9	-1	95954641	1410
ENSMUSG00000049809	protein_coding	Krtap9-3	ENSMUST00000062683	protein_coding	principal1	11	-1	99598105	759
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000130148	retained_intron		16	1	10545377	704
ENSMUSG00000097777	antisense	Gm16794	ENSMUST00000185324	antisense		9	-1	95954650	1490
ENSMUSG00000030960	protein_coding	Eef1akmt2	ENSMUST00000120425	protein_coding		7	-1	132852616	573
ENSMUSG00000054409	protein_coding	Tmem74	ENSMUST00000067469	protein_coding	principal1	15	-1	43870036	3528
ENSMUSG00000097777	antisense	Gm16794	ENSMUST00000181139	antisense		9	-1	95955399	1204
ENSMUSG00000037855	protein_coding	Zfp365	ENSMUST00000064656	protein_coding	principal1	10	-1	67912662	4259
ENSMUSG00000015755	protein_coding	Tab2	ENSMUST00000146444	protein_coding	principal1	10	-1	7956230	4380
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000066345	protein_coding	principal3	16	1	10545387	6189
ENSMUSG00000083884	processed_pseudogene	Gm15388	ENSMUST00000121578	processed_pseudogene		1	-1	107138569	726
ENSMUSG00000037855	protein_coding	Zfp365	ENSMUST00000138543	retained_intron		10	-1	67912435	1745
ENSMUSG00000051457	protein_coding	Spn	ENSMUST00000143713	nonsense_mediated_decay		7	-1	127137814	2161
ENSMUSG00000015755	protein_coding	Tab2	ENSMUST00000147938	protein_coding		10	-1	7955893	1980
ENSMUSG00000056586	protein_coding	Zar1l	ENSMUST00000118769	protein_coding	principal1	5	-1	150518164	895
ENSMUSG00000051457	protein_coding	Spn	ENSMUST00000205483	protein_coding		7	-1	127136566	597
ENSMUSG00000030960	protein_coding	Eef1akmt2	ENSMUST00000135932	processed_transcript		7	-1	132852379	563
ENSMUSG00000037855	protein_coding	Zfp365	ENSMUST00000127869	processed_transcript		10	-1	67899007	292
ENSMUSG00000015755	protein_coding	Tab2	ENSMUST00000142007	retained_intron		10	-1	7911486	618
ENSMUSG00000082104	processed_pseudogene	Gm15933	ENSMUST00000117215	processed_pseudogene		5	-1	150511338	616
ENSMUSG00000037855	protein_coding	Zfp365	ENSMUST00000132870	processed_transcript		10	-1	67901337	3276
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000115827	protein_coding	alternative2	16	1	10545398	2949
ENSMUSG00000062773	protein_coding	Tex101	ENSMUST00000078001	protein_coding	principal1	7	-1	24672050	1059
ENSMUSG00000015755	protein_coding	Tab2	ENSMUST00000143848	retained_intron		10	-1	7910500	703
ENSMUSG00000030960	protein_coding	Eef1akmt2	ENSMUST00000152410	nonsense_mediated_decay		7	-1	132852615	627
ENSMUSG00000108114	protein_coding	Olfr800	ENSMUST00000217094	protein_coding	principal1	10	1	129657694	3831
ENSMUSG00000062773	protein_coding	Tex101	ENSMUST00000205488	protein_coding		7	-1	24676675	1220
ENSMUSG00000051457	protein_coding	Spn	ENSMUST00000049931	protein_coding	principal1	7	-1	127137823	3743
ENSMUSG00000030960	protein_coding	Eef1akmt2	ENSMUST00000141920	nonsense_mediated_decay		7	-1	132852585	470
ENSMUSG00000062773	protein_coding	Tex101	ENSMUST00000206390	protein_coding		7	-1	24676675	1161
ENSMUSG00000032035	protein_coding	Ets1	ENSMUST00000238819	protein_coding	alternative1	9	1	32636248	2105
ENSMUSG00000108114	protein_coding	Olfr800	ENSMUST00000104903	protein_coding	principal1	10	1	129659804	940
ENSMUSG00000098038	processed_pseudogene	Gm8793	ENSMUST00000183069	processed_pseudogene		10	1	31639158	1303
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000150894	protein_coding		16	1	10545409	356
ENSMUSG00000109617	processed_pseudogene	Gm7669	ENSMUST00000210184	processed_pseudogene		8	-1	13747478	1603
ENSMUSG00000030960	protein_coding	Eef1akmt2	ENSMUST00000154914	retained_intron		7	-1	132852639	811
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000038145	protein_coding	alternative2	16	1	10545409	3730
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000187356	retained_intron		9	1	95857597	2305
ENSMUSG00000057674	protein_coding	Gm11938	ENSMUST00000072306	protein_coding	principal1	11	-1	99603308	663
ENSMUSG00000078116	protein_coding	Olfr828	ENSMUST00000215380	protein_coding	principal1	9	-1	18819526	1689
ENSMUSG00000117383	TEC	4930415O11Rik	ENSMUST00000234167	TEC		18	-1	7151777	1434
ENSMUSG00000117360	processed_pseudogene	Gm18581	ENSMUST00000234034	processed_pseudogene		18	-1	7108183	1003
ENSMUSG00000078116	protein_coding	Olfr828	ENSMUST00000104914	protein_coding	principal1	9	-1	18816292	939
ENSMUSG00000029726	protein_coding	Mepce	ENSMUST00000031740	protein_coding	principal1	5	-1	137786663	3128
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000115828	nonsense_mediated_decay		16	1	10545409	3041
ENSMUSG00000111957	TEC	Gm47582	ENSMUST00000218987	TEC		10	-1	122778065	586
ENSMUSG00000029726	protein_coding	Mepce	ENSMUST00000132726	protein_coding		5	-1	137786715	524
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000115823	protein_coding	alternative2	16	1	10600551	2643
ENSMUSG00000112220	antisense	Gm36208	ENSMUST00000220013	antisense		10	-1	122792483	429
ENSMUSG00000041216	protein_coding	Clvs1	ENSMUST00000147285	processed_transcript		4	1	9269293	1327
ENSMUSG00000112417	TEC	A430028G04Rik	ENSMUST00000219095	TEC		10	-1	122758410	1973
ENSMUSG00000030330	protein_coding	Ing4	ENSMUST00000140131	protein_coding	alternative1	6	1	125039760	1446
ENSMUSG00000029726	protein_coding	Mepce	ENSMUST00000140336	retained_intron		5	-1	137783350	460
ENSMUSG00000058513	protein_coding	Olfr801	ENSMUST00000213294	protein_coding	principal1	10	-1	129673790	4045
ENSMUSG00000032714	protein_coding	Syde1	ENSMUST00000040580	protein_coding	principal1	10	-1	78591964	3288
ENSMUSG00000029726	protein_coding	Mepce	ENSMUST00000196022	protein_coding		5	-1	137787655	480
ENSMUSG00000030330	protein_coding	Ing4	ENSMUST00000128277	retained_intron		6	1	125039836	2294
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000122856	processed_transcript		16	1	10610829	659
ENSMUSG00000058513	protein_coding	Olfr801	ENSMUST00000216067	protein_coding	principal1	10	-1	129673837	4014
ENSMUSG00000029726	protein_coding	Mepce	ENSMUST00000196936	processed_transcript		5	-1	137786691	317
ENSMUSG00000058513	protein_coding	Olfr801	ENSMUST00000203424	protein_coding		10	-1	129673865	568
ENSMUSG00000112021	TEC	Gm30346	ENSMUST00000218641	TEC		10	1	78591713	1699
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000145866	processed_transcript		16	1	10630060	571
ENSMUSG00000058513	protein_coding	Olfr801	ENSMUST00000072063	protein_coding	principal1	10	-1	129670517	957
ENSMUSG00000032035	protein_coding	Ets1	ENSMUST00000034534	protein_coding	principal2	9	1	32696022	5080
ENSMUSG00000079875	polymorphic_pseudogene	Olfr22-ps1	ENSMUST00000115991	polymorphic_pseudogene	principal1	11	1	73951323	1237
ENSMUSG00000068663	protein_coding	Clec16a	ENSMUST00000115824	protein_coding	alternative2	16	1	10545339	6244
ENSMUSG00000041216	protein_coding	Clvs1	ENSMUST00000128117	processed_transcript		4	1	9269317	3713
ENSMUSG00000051414	protein_coding	Olfr829	ENSMUST00000212229	protein_coding	alternative2	9	1	18854933	2590
ENSMUSG00000087384	antisense	Gm15558	ENSMUST00000126849	antisense		16	-1	10683539	2018
ENSMUSG00000051414	protein_coding	Olfr829	ENSMUST00000058411	protein_coding	principal2	9	1	18856627	966
ENSMUSG00000034613	protein_coding	Ppm1h	ENSMUST00000162853	retained_intron		10	1	122678762	3200
ENSMUSG00000069094	protein_coding	Pde7a	ENSMUST00000099195	protein_coding	alternative1	3	-1	19311322	6298
ENSMUSG00000030330	protein_coding	Ing4	ENSMUST00000032480	protein_coding	principal2	6	1	125039836	1629
ENSMUSG00000032035	protein_coding	Ets1	ENSMUST00000050797	protein_coding		9	1	32696049	1976
ENSMUSG00000043279	protein_coding	Trim56	ENSMUST00000054384	protein_coding	principal1	5	-1	137116207	9279
ENSMUSG00000062868	protein_coding	Olfr830	ENSMUST00000212723	protein_coding	alternative2	9	1	18874693	3105
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000095427	protein_coding	principal3	17	-1	29347934	1952
ENSMUSG00000062868	protein_coding	Olfr830	ENSMUST00000078861	protein_coding	principal2	9	1	18875329	948
ENSMUSG00000043279	protein_coding	Trim56	ENSMUST00000152207	protein_coding		5	-1	137116209	867
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000235097	retained_intron		17	-1	29334367	2292
ENSMUSG00000035296	protein_coding	Sgcg	ENSMUST00000077954	protein_coding	principal1	14	-1	61258490	3515
ENSMUSG00000032035	protein_coding	Ets1	ENSMUST00000184887	protein_coding		9	1	32696121	2107
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000235118	retained_intron		17	-1	29337138	1867
ENSMUSG00000071649	protein_coding	B3gat3	ENSMUST00000096243	protein_coding	principal1	19	1	8920374	1603
ENSMUSG00000032035	protein_coding	Ets1	ENSMUST00000184364	protein_coding		9	1	32696384	678
ENSMUSG00000058725	protein_coding	Gm11937	ENSMUST00000076478	protein_coding	principal1	11	-1	99610189	396
ENSMUSG00000030330	protein_coding	Ing4	ENSMUST00000152574	retained_intron		6	1	125039848	791
ENSMUSG00000079015	protein_coding	Serpina1c	ENSMUST00000074051	protein_coding	principal1	12	-1	103904887	1361
ENSMUSG00000093866	protein_coding	Olfr802	ENSMUST00000203785	protein_coding	principal1	10	-1	129688159	5535
ENSMUSG00000038188	protein_coding	Scarf1	ENSMUST00000042808	protein_coding	principal2	11	1	75513540	2887
ENSMUSG00000093866	protein_coding	Olfr802	ENSMUST00000217576	protein_coding	principal1	10	-1	129688169	5297
ENSMUSG00000035296	protein_coding	Sgcg	ENSMUST00000121148	protein_coding	principal1	14	-1	61258424	1298
ENSMUSG00000069094	protein_coding	Pde7a	ENSMUST00000091314	protein_coding	principal3	3	-1	19265008	4454
ENSMUSG00000071649	protein_coding	B3gat3	ENSMUST00000235193	retained_intron		19	1	8920395	1414
ENSMUSG00000108362	processed_pseudogene	Gm18561	ENSMUST00000206027	processed_pseudogene		7	1	127155069	804
ENSMUSG00000093866	protein_coding	Olfr802	ENSMUST00000074713	protein_coding	principal1	10	-1	129682737	939
ENSMUSG00000098843	antisense	Gm27240	ENSMUST00000183616	antisense		9	-1	32711171	677
ENSMUSG00000038188	protein_coding	Scarf1	ENSMUST00000118243	protein_coding	alternative2	11	1	75513541	2617
ENSMUSG00000047810	protein_coding	Ccdc88b	ENSMUST00000236028	protein_coding		19	-1	6855238	3843
ENSMUSG00000086432	antisense	B430119L08Rik	ENSMUST00000130054	antisense		12	1	103895897	1994
ENSMUSG00000082155	processed_pseudogene	Gm7164	ENSMUST00000117503	processed_pseudogene		X	-1	23399479	450
ENSMUSG00000071649	protein_coding	B3gat3	ENSMUST00000237071	nonsense_mediated_decay		19	1	8920484	909
ENSMUSG00000030330	protein_coding	Ing4	ENSMUST00000151125	retained_intron		6	1	125039861	1383
ENSMUSG00000035296	protein_coding	Sgcg	ENSMUST00000129886	processed_transcript		14	-1	61232440	361
ENSMUSG00000060756	protein_coding	Krtap2-4	ENSMUST00000074926	protein_coding	principal1	11	-1	99614846	828
ENSMUSG00000104370	TEC	Gm37514	ENSMUST00000194512	TEC		10	-1	78601874	2753
ENSMUSG00000108717	TEC	Gm44940	ENSMUST00000206225	TEC		7	-1	127173205	1247
ENSMUSG00000030330	protein_coding	Ing4	ENSMUST00000112417	nonsense_mediated_decay		6	1	125039861	1487
ENSMUSG00000069094	protein_coding	Pde7a	ENSMUST00000156652	nonsense_mediated_decay		3	-1	19311052	927
ENSMUSG00000038188	protein_coding	Scarf1	ENSMUST00000123819	nonsense_mediated_decay		11	1	75513575	2789
ENSMUSG00000030330	protein_coding	Ing4	ENSMUST00000156091	retained_intron		6	1	125043954	879
ENSMUSG00000069094	protein_coding	Pde7a	ENSMUST00000129060	retained_intron		3	-1	19311304	670
ENSMUSG00000069094	protein_coding	Pde7a	ENSMUST00000143120	processed_transcript		3	-1	19310903	245
ENSMUSG00000030330	protein_coding	Ing4	ENSMUST00000133695	retained_intron		6	1	125045522	3458
ENSMUSG00000057050	protein_coding	Olfr397	ENSMUST00000213134	protein_coding	principal1	11	1	73960817	4048
ENSMUSG00000069094	protein_coding	Pde7a	ENSMUST00000121951	protein_coding		3	-1	19264965	382
ENSMUSG00000057050	protein_coding	Olfr397	ENSMUST00000216291	protein_coding	principal1	11	1	73960817	4168
ENSMUSG00000030330	protein_coding	Ing4	ENSMUST00000146229	retained_intron		6	1	125047640	849
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000166115	protein_coding	principal1	19	-1	6941193	1858
ENSMUSG00000057050	protein_coding	Olfr397	ENSMUST00000215020	processed_transcript		11	1	73960890	3191
ENSMUSG00000044375	protein_coding	Pcare	ENSMUST00000057405	protein_coding	principal1	17	-1	71752894	5015
ENSMUSG00000057050	protein_coding	Olfr397	ENSMUST00000121280	protein_coding	principal1	11	1	73964530	1091
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000236348	nonsense_mediated_decay		19	-1	6942480	1712
ENSMUSG00000117075	TEC	Gm49922	ENSMUST00000233072	TEC		17	-1	71756762	1614
ENSMUSG00000055943	protein_coding	Emc7	ENSMUST00000069747	protein_coding	principal1	2	1	112454997	5826
ENSMUSG00000069094	protein_coding	Pde7a	ENSMUST00000149081	nonsense_mediated_decay		3	-1	19260241	724
ENSMUSG00000085820	lincRNA	4933406K04Rik	ENSMUST00000135423	lincRNA		12	-1	106716362	1391
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000234970	protein_coding		17	-1	29340490	826
ENSMUSG00000069094	protein_coding	Pde7a	ENSMUST00000139426	processed_transcript		3	-1	19233529	605
ENSMUSG00000085820	lincRNA	4933406K04Rik	ENSMUST00000149382	lincRNA		12	-1	106716362	1601
ENSMUSG00000049041	protein_coding	Olfr398	ENSMUST00000214334	protein_coding	principal1	11	-1	73990407	5348
ENSMUSG00000072694	protein_coding	1500011B03Rik	ENSMUST00000112160	protein_coding	alternative2	5	-1	114813976	1333
ENSMUSG00000001029	protein_coding	Icam2	ENSMUST00000001055	protein_coding	principal1	11	-1	106382781	1282
ENSMUSG00000085820	lincRNA	4933406K04Rik	ENSMUST00000124068	lincRNA		12	-1	106716333	1136
ENSMUSG00000049041	protein_coding	Olfr398	ENSMUST00000117510	protein_coding	principal1	11	-1	73990407	5135
ENSMUSG00000069094	protein_coding	Pde7a	ENSMUST00000141621	retained_intron		3	-1	19230028	798
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000207918	protein_coding		7	1	130577438	5804
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000133696	retained_intron		19	1	6341135	5086
ENSMUSG00000085820	lincRNA	4933406K04Rik	ENSMUST00000124363	lincRNA		12	-1	106716324	1064
ENSMUSG00000072694	protein_coding	1500011B03Rik	ENSMUST00000140374	protein_coding	alternative2	5	-1	114823460	444
ENSMUSG00000017064	protein_coding	Prl5a1	ENSMUST00000017208	protein_coding	principal1	13	1	28142484	1061
ENSMUSG00000049041	protein_coding	Olfr398	ENSMUST00000053874	protein_coding	principal1	11	-1	73984606	945
ENSMUSG00000001029	protein_coding	Icam2	ENSMUST00000173795	protein_coding		11	-1	106380801	539
ENSMUSG00000069094	protein_coding	Pde7a	ENSMUST00000148590	retained_intron		3	-1	19236497	1120
ENSMUSG00000061802	protein_coding	Armc4	ENSMUST00000234788	protein_coding	principal1	18	-1	7297936	3508
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000234507	protein_coding		17	-1	29347293	1653
ENSMUSG00000001029	protein_coding	Icam2	ENSMUST00000106813	protein_coding		11	-1	106388072	574
ENSMUSG00000087108	antisense	Gm16093	ENSMUST00000141455	antisense		3	1	19227780	392
ENSMUSG00000061802	protein_coding	Armc4	ENSMUST00000235068	processed_transcript		18	-1	7184073	408
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000215492	protein_coding		7	1	130577484	5312
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000235088	protein_coding		17	-1	29347351	1660
ENSMUSG00000108768	processed_pseudogene	Gm44971	ENSMUST00000206192	processed_pseudogene		7	1	24684306	337
ENSMUSG00000061802	protein_coding	Armc4	ENSMUST00000234458	retained_intron		18	-1	7214631	751
ENSMUSG00000001029	protein_coding	Icam2	ENSMUST00000141146	protein_coding		11	-1	106388075	506
ENSMUSG00000089947	sense_intronic	Gm15509	ENSMUST00000162615	sense_intronic		1	-1	187124365	2162
ENSMUSG00000089831	processed_pseudogene	Gm15508	ENSMUST00000160330	processed_pseudogene		1	-1	187073335	325
ENSMUSG00000107163	TEC	Gm43496	ENSMUST00000201682	TEC		1	-1	187091160	3001
ENSMUSG00000072694	protein_coding	1500011B03Rik	ENSMUST00000061251	processed_transcript		5	-1	114813945	579
ENSMUSG00000041216	protein_coding	Clvs1	ENSMUST00000038841	protein_coding	principal1	4	1	9269317	3604
ENSMUSG00000057215	lincRNA	Platr28	ENSMUST00000133824	lincRNA		7	1	107243022	1294
ENSMUSG00000089730	antisense	1700007P06Rik	ENSMUST00000160380	antisense		1	1	187125138	823
ENSMUSG00000109078	processed_pseudogene	Gm19033	ENSMUST00000208516	processed_pseudogene		7	1	107366072	964
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000099774	protein_coding		19	-1	6941507	1434
ENSMUSG00000106839	TEC	Gm43497	ENSMUST00000201137	TEC		1	-1	187083884	2316
ENSMUSG00000118426	processed_pseudogene	Gm2102	ENSMUST00000238744	processed_pseudogene		1	-1	78217476	745
ENSMUSG00000041216	protein_coding	Clvs1	ENSMUST00000142369	processed_transcript		4	1	9269330	1025
ENSMUSG00000001029	protein_coding	Icam2	ENSMUST00000106809	retained_intron		11	-1	106382996	624
ENSMUSG00000052915	protein_coding	Msl1	ENSMUST00000037915	protein_coding	principal2	11	1	98795516	4593
ENSMUSG00000061802	protein_coding	Armc4	ENSMUST00000234281	protein_coding		18	-1	7273582	412
ENSMUSG00000061802	protein_coding	Armc4	ENSMUST00000234196	protein_coding		18	-1	7273582	582
ENSMUSG00000083104	processed_pseudogene	Gm12917	ENSMUST00000119850	processed_pseudogene		4	1	124718999	639
ENSMUSG00000041216	protein_coding	Clvs1	ENSMUST00000141734	processed_transcript		4	1	9269347	328
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000237911	retained_intron		19	-1	6939996	1666
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000235021	protein_coding		17	-1	29347516	1108
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000153658	protein_coding		17	-1	29347552	1093
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000234129	protein_coding		17	-1	29347552	1185
ENSMUSG00000041216	protein_coding	Clvs1	ENSMUST00000108348	protein_coding	principal1	4	1	9271455	3526
ENSMUSG00000071648	protein_coding	Rom1	ENSMUST00000096242	protein_coding	principal1	19	-1	8929356	1517
ENSMUSG00000061802	protein_coding	Armc4	ENSMUST00000081275	protein_coding	principal1	18	-1	7297901	3477
ENSMUSG00000052915	protein_coding	Msl1	ENSMUST00000107485	protein_coding		11	1	98795791	2091
ENSMUSG00000062542	protein_coding	Syt9	ENSMUST00000137663	protein_coding		7	1	107370728	482
ENSMUSG00000090206	protein_coding	Tepp	ENSMUST00000162555	protein_coding		8	1	95310566	287
ENSMUSG00000052915	protein_coding	Msl1	ENSMUST00000107487	protein_coding	alternative1	11	1	98795800	2836
ENSMUSG00000072694	protein_coding	1500011B03Rik	ENSMUST00000234046	processed_transcript		5	-1	114823468	947
ENSMUSG00000072694	protein_coding	1500011B03Rik	ENSMUST00000100850	protein_coding	principal2	5	-1	114823445	420
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000025649	protein_coding	principal1	19	1	10605327	4459
ENSMUSG00000041216	protein_coding	Clvs1	ENSMUST00000141085	processed_transcript		4	1	9311756	663
ENSMUSG00000052915	protein_coding	Msl1	ENSMUST00000037930	protein_coding		11	1	98798654	1303
ENSMUSG00000041216	protein_coding	Clvs1	ENSMUST00000135864	processed_transcript		4	1	9335609	492
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000238183	protein_coding		19	-1	6940522	1255
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000235518	nonsense_mediated_decay		19	-1	6940839	1504
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000237934	protein_coding	principal1	19	-1	6941219	1729
ENSMUSG00000052915	protein_coding	Msl1	ENSMUST00000126969	protein_coding		11	1	98800165	439
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000236280	protein_coding		19	1	10605587	1380
ENSMUSG00000100790	lincRNA	Gm28518	ENSMUST00000188788	lincRNA		Y	-1	33385900	1498
ENSMUSG00000113061	protein_coding	Rps18-ps5	ENSMUST00000223428	protein_coding	principal1	13	1	28257528	607
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000237337	protein_coding		19	1	10605623	1589
ENSMUSG00000052915	protein_coding	Msl1	ENSMUST00000141016	processed_transcript		11	1	98804271	667
ENSMUSG00000108430	processed_pseudogene	Gm36776	ENSMUST00000207006	processed_pseudogene		7	-1	24706617	203
ENSMUSG00000047810	protein_coding	Ccdc88b	ENSMUST00000113440	protein_coding	principal1	19	-1	6858211	4959
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000207789	nonsense_mediated_decay		7	1	130577484	3146
ENSMUSG00000100790	lincRNA	Gm28518	ENSMUST00000187047	lincRNA		Y	-1	33385448	621
ENSMUSG00000100790	lincRNA	Gm28518	ENSMUST00000187840	lincRNA		Y	-1	33385448	437
ENSMUSG00000047810	protein_coding	Ccdc88b	ENSMUST00000238099	protein_coding		19	-1	6848353	612
ENSMUSG00000033200	protein_coding	Tpsg1	ENSMUST00000160377	protein_coding		17	1	25369273	1040
ENSMUSG00000047810	protein_coding	Ccdc88b	ENSMUST00000237252	retained_intron		19	-1	6848408	384
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000099782	protein_coding		19	-1	6942450	1742
ENSMUSG00000033200	protein_coding	Tpsg1	ENSMUST00000160485	protein_coding		17	1	25369289	905
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000151232	processed_transcript		4	-1	9475458	410
ENSMUSG00000033200	protein_coding	Tpsg1	ENSMUST00000162021	protein_coding		17	1	25370553	777
ENSMUSG00000062542	protein_coding	Syt9	ENSMUST00000130414	nonsense_mediated_decay		7	1	107370790	3267
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000235881	nonsense_mediated_decay		19	-1	6942425	1490
ENSMUSG00000096938	processed_transcript	9530052E02Rik	ENSMUST00000180750	antisense		8	1	11007850	949
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000236722	retained_intron		19	1	10605710	714
ENSMUSG00000096938	processed_transcript	9530052E02Rik	ENSMUST00000181315	retained_intron		8	1	11049578	1531
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000099776	protein_coding		19	-1	6940839	1213
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000237318	retained_intron		19	1	10606342	988
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000235237	nonsense_mediated_decay		19	-1	6940839	1161
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000238128	nonsense_mediated_decay		19	-1	6940809	737
ENSMUSG00000033200	protein_coding	Tpsg1	ENSMUST00000024999	protein_coding	principal1	17	1	25370584	1186
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000237138	retained_intron		19	1	10610421	854
ENSMUSG00000062542	protein_coding	Syt9	ENSMUST00000073459	protein_coding	principal1	7	1	107370790	3817
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000235363	protein_coding		19	-1	6941253	463
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000236328	protein_coding		19	1	10614865	587
ENSMUSG00000026439	protein_coding	Rbbp5	ENSMUST00000190825	protein_coding	alternative1	1	1	132477365	2456
ENSMUSG00000024958	protein_coding	Gpr137	ENSMUST00000025909	protein_coding	principal1	19	-1	6941479	1717
ENSMUSG00000062542	protein_coding	Syt9	ENSMUST00000144003	retained_intron		7	1	107504062	2536
ENSMUSG00000033200	protein_coding	Tpsg1	ENSMUST00000160920	processed_transcript		17	1	25373009	867
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000236596	retained_intron		19	1	10614874	416
ENSMUSG00000062542	protein_coding	Syt9	ENSMUST00000127444	retained_intron		7	1	107504096	2497
ENSMUSG00000038894	protein_coding	Irs2	ENSMUST00000040514	protein_coding	principal1	8	-1	11008458	6323
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000237804	retained_intron		19	1	10618994	667
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000236937	retained_intron		19	1	10625047	628
ENSMUSG00000024740	protein_coding	Ddb1	ENSMUST00000236279	retained_intron		19	1	10626603	1279
ENSMUSG00000026439	protein_coding	Rbbp5	ENSMUST00000190997	protein_coding	principal2	1	1	132477367	2856
ENSMUSG00000080999	unprocessed_pseudogene	H2ac5-ps	ENSMUST00000118168	unprocessed_pseudogene		13	-1	23746499	334
ENSMUSG00000117955	TEC	Gm50205	ENSMUST00000237729	TEC		19	1	10573512	3034
ENSMUSG00000118145	processed_pseudogene	Gm6724	ENSMUST00000237898	processed_pseudogene		18	-1	34970735	267
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000234416	nonsense_mediated_decay		17	-1	29347552	1652
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000118366	protein_coding	alternative1	17	-1	29347934	1897
ENSMUSG00000032898	protein_coding	Fbxo21	ENSMUST00000202447	protein_coding	principal3	5	1	117976730	3959
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000234948	retained_intron		17	-1	29347934	2082
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000127423	retained_intron		17	-1	29340536	1267
ENSMUSG00000075031	protein_coding	H2bc3	ENSMUST00000099703	protein_coding	principal1	13	1	23746734	508
ENSMUSG00000036391	protein_coding	Sec24a	ENSMUST00000109097	protein_coding	principal3	11	-1	51756618	6581
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000234856	processed_transcript		17	-1	29346829	959
ENSMUSG00000090206	protein_coding	Tepp	ENSMUST00000135142	protein_coding		8	1	95310586	603
ENSMUSG00000026439	protein_coding	Rbbp5	ENSMUST00000187505	protein_coding		1	1	132477406	1977
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000141319	retained_intron		17	-1	29334107	274
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000234868	processed_transcript		17	-1	29343104	743
ENSMUSG00000032898	protein_coding	Fbxo21	ENSMUST00000201427	retained_intron		5	1	117976774	1971
ENSMUSG00000061615	protein_coding	H2ac4	ENSMUST00000078369	protein_coding	principal1	13	1	23751126	473
ENSMUSG00000026439	protein_coding	Rbbp5	ENSMUST00000027700	protein_coding		1	1	132477435	3385
ENSMUSG00000036391	protein_coding	Sec24a	ENSMUST00000038210	protein_coding	alternative2	11	-1	51756211	3800
ENSMUSG00000086815	protein_coding	3110082J24Rik	ENSMUST00000199573	protein_coding	principal1	5	-1	30106086	767
ENSMUSG00000021499	protein_coding	Catsper3	ENSMUST00000021961	protein_coding	alternative2	13	1	55784568	1330
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000234180	nonsense_mediated_decay		17	-1	29347770	894
ENSMUSG00000086815	protein_coding	3110082J24Rik	ENSMUST00000127749	protein_coding	principal1	5	-1	30105359	327
ENSMUSG00000026439	protein_coding	Rbbp5	ENSMUST00000188575	protein_coding		1	1	132477491	339
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000151739	retained_intron		17	-1	29340453	935
ENSMUSG00000026439	protein_coding	Rbbp5	ENSMUST00000189786	protein_coding		1	1	132477642	716
ENSMUSG00000036391	protein_coding	Sec24a	ENSMUST00000109092	protein_coding		11	-1	51756431	2094
ENSMUSG00000026439	protein_coding	Rbbp5	ENSMUST00000187834	retained_intron		1	1	132503733	1923
ENSMUSG00000036391	protein_coding	Sec24a	ENSMUST00000064297	protein_coding		11	-1	51756438	2104
ENSMUSG00000024012	protein_coding	Mtch1	ENSMUST00000132753	retained_intron		17	-1	29342930	351
ENSMUSG00000069267	protein_coding	H3c2	ENSMUST00000091703	protein_coding	principal1	13	1	23752267	620
ENSMUSG00000032898	protein_coding	Fbxo21	ENSMUST00000035579	protein_coding	alternative1	5	1	117976784	3883
ENSMUSG00000032898	protein_coding	Fbxo21	ENSMUST00000201611	protein_coding		5	1	117976971	1878
ENSMUSG00000022897	protein_coding	Dyrk1a	ENSMUST00000119878	protein_coding	principal1	16	1	94570010	5759
ENSMUSG00000025780	protein_coding	Itih5	ENSMUST00000026886	protein_coding	principal1	2	1	10153571	7900
ENSMUSG00000032898	protein_coding	Fbxo21	ENSMUST00000200780	processed_transcript		5	1	117977314	387
ENSMUSG00000036391	protein_coding	Sec24a	ENSMUST00000147255	retained_intron		11	-1	51757161	2744
ENSMUSG00000032898	protein_coding	Fbxo21	ENSMUST00000201889	processed_transcript		5	1	117979324	303
ENSMUSG00000117727	lincRNA	Gm3587	ENSMUST00000238134	lincRNA		18	-1	35087623	412
ENSMUSG00000118380	processed_transcript	Gm36037	ENSMUST00000237091	lincRNA		18	1	34982922	510
ENSMUSG00000113304	unprocessed_pseudogene	Gm48618	ENSMUST00000220938	unprocessed_pseudogene		12	-1	116152341	368
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000136390	processed_transcript		15	-1	76062719	3071
ENSMUSG00000036391	protein_coding	Sec24a	ENSMUST00000154325	retained_intron		11	-1	51763634	4273
ENSMUSG00000118380	processed_transcript	Gm36037	ENSMUST00000236489	lincRNA		18	1	34982925	913
ENSMUSG00000083246	processed_pseudogene	Gm11839	ENSMUST00000120647	processed_pseudogene		4	1	12114284	1953
ENSMUSG00000118380	processed_transcript	Gm36037	ENSMUST00000238090	retained_intron		18	1	34982970	2451
ENSMUSG00000021499	protein_coding	Catsper3	ENSMUST00000109898	protein_coding	principal3	13	1	55784579	1311
ENSMUSG00000112360	lincRNA	Gm48614	ENSMUST00000218165	lincRNA		10	-1	8021292	341
ENSMUSG00000113000	processed_pseudogene	Gm6049	ENSMUST00000222369	processed_pseudogene		13	-1	42472777	458
ENSMUSG00000113002	unprocessed_pseudogene	Gm48620	ENSMUST00000222637	unprocessed_pseudogene		12	-1	116163809	408
ENSMUSG00000022897	protein_coding	Dyrk1a	ENSMUST00000122284	protein_coding		16	1	94570479	2311
ENSMUSG00000085693	lincRNA	Gm13371	ENSMUST00000137756	lincRNA		2	-1	28093514	469
ENSMUSG00000112109	lincRNA	Gm30906	ENSMUST00000219578	lincRNA		10	1	8176131	535
ENSMUSG00000022897	protein_coding	Dyrk1a	ENSMUST00000139250	protein_coding		16	1	94570864	521
ENSMUSG00000113367	processed_pseudogene	Gm47125	ENSMUST00000222839	processed_pseudogene		13	1	42569463	424
ENSMUSG00000069266	protein_coding	H4c2	ENSMUST00000102965	protein_coding	principal1	13	1	23757013	397
ENSMUSG00000104155	TEC	Gm38103	ENSMUST00000191707	TEC		12	-1	56610476	864
ENSMUSG00000028289	protein_coding	Epha7	ENSMUST00000080934	protein_coding		4	1	28813131	2880
ENSMUSG00000022897	protein_coding	Dyrk1a	ENSMUST00000155791	protein_coding		16	1	94570907	689
ENSMUSG00000101302	lincRNA	Gm28519	ENSMUST00000190126	lincRNA		Y	-1	33414835	1493
ENSMUSG00000075029	antisense	4930558J22Rik	ENSMUST00000139822	antisense		13	-1	23757620	1480
ENSMUSG00000022897	protein_coding	Dyrk1a	ENSMUST00000134383	retained_intron		16	1	94668896	2561
ENSMUSG00000026611	protein_coding	Spata17	ENSMUST00000183819	protein_coding	principal3	1	-1	187215465	1552
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000079223	protein_coding	principal1	4	1	95557507	1891
ENSMUSG00000101302	lincRNA	Gm28519	ENSMUST00000189729	lincRNA		Y	-1	33414382	612
ENSMUSG00000101302	lincRNA	Gm28519	ENSMUST00000187457	lincRNA		Y	-1	33414382	431
ENSMUSG00000044576	protein_coding	Garem2	ENSMUST00000058045	protein_coding	principal1	5	1	30105161	3865
ENSMUSG00000022897	protein_coding	Dyrk1a	ENSMUST00000023614	protein_coding	principal1	16	1	94570907	5754
ENSMUSG00000081593	processed_pseudogene	Gm11841	ENSMUST00000117060	processed_pseudogene		4	1	12125290	1963
ENSMUSG00000026611	protein_coding	Spata17	ENSMUST00000183996	protein_coding		1	-1	187142904	552
ENSMUSG00000108847	lincRNA	B830042I05Rik	ENSMUST00000208333	lincRNA		8	1	11071046	1620
ENSMUSG00000081692	processed_pseudogene	Gm15971	ENSMUST00000119372	processed_pseudogene		16	1	94620377	211
ENSMUSG00000026611	protein_coding	Spata17	ENSMUST00000183931	protein_coding		1	-1	187215437	599
ENSMUSG00000060093	protein_coding	H4c1	ENSMUST00000102964	protein_coding	principal1	13	-1	23761230	539
ENSMUSG00000026611	protein_coding	Spata17	ENSMUST00000184543	protein_coding		1	-1	187143097	667
ENSMUSG00000091698	protein_coding	Gm6526	ENSMUST00000100643	protein_coding	principal5	14	1	43747866	1723
ENSMUSG00000091698	protein_coding	Gm6526	ENSMUST00000179860	protein_coding	alternative2	14	1	43747883	591
ENSMUSG00000069265	protein_coding	H3c1	ENSMUST00000091701	protein_coding	principal1	13	-1	23762386	534
ENSMUSG00000046679	protein_coding	C87436	ENSMUST00000050497	protein_coding	principal1	6	1	86438374	2534
ENSMUSG00000026611	protein_coding	Spata17	ENSMUST00000110945	protein_coding	alternative2	1	-1	187215421	1045
ENSMUSG00000026958	protein_coding	Dpp7	ENSMUST00000028332	protein_coding	principal1	2	-1	25356359	1682
ENSMUSG00000109151	lincRNA	Gm44714	ENSMUST00000208665	lincRNA		8	1	11116555	657
ENSMUSG00000046679	protein_coding	C87436	ENSMUST00000203568	protein_coding		6	1	86438389	732
ENSMUSG00000026611	protein_coding	Spata17	ENSMUST00000183656	processed_transcript		1	-1	187143084	593
ENSMUSG00000046679	protein_coding	C87436	ENSMUST00000113700	protein_coding	principal1	6	1	86438692	2523
ENSMUSG00000026611	protein_coding	Spata17	ENSMUST00000183469	processed_transcript		1	-1	187215446	1154
ENSMUSG00000026611	protein_coding	Spata17	ENSMUST00000027908	protein_coding	principal3	1	-1	187215446	1303
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000152349	nonsense_mediated_decay		19	1	6341155	485
ENSMUSG00000027285	protein_coding	Haus2	ENSMUST00000028741	nonsense_mediated_decay		2	1	120609383	1430
ENSMUSG00000046679	protein_coding	C87436	ENSMUST00000141972	nonsense_mediated_decay		6	1	86438692	2630
ENSMUSG00000028902	protein_coding	Sf3a3	ENSMUST00000030734	protein_coding	principal1	4	1	124714776	1820
ENSMUSG00000046679	protein_coding	C87436	ENSMUST00000143430	processed_transcript		6	1	86438708	505
ENSMUSG00000090206	protein_coding	Tepp	ENSMUST00000161029	protein_coding	principal4	8	1	95311515	968
ENSMUSG00000028902	protein_coding	Sf3a3	ENSMUST00000154712	processed_transcript		4	1	124714883	788
ENSMUSG00000028902	protein_coding	Sf3a3	ENSMUST00000151049	processed_transcript		4	1	124721733	879
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000176162	processed_transcript		4	1	95557511	3037
ENSMUSG00000026958	protein_coding	Dpp7	ENSMUST00000139108	processed_transcript		2	-1	25356345	2167
ENSMUSG00000046679	protein_coding	C87436	ENSMUST00000113698	protein_coding		6	1	86438727	2922
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000141248	processed_transcript		4	1	95557519	2562
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000028368	protein_coding	principal1	2	-1	59882584	2072
ENSMUSG00000046679	protein_coding	C87436	ENSMUST00000133753	nonsense_mediated_decay		6	1	86443813	2321
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000177394	protein_coding		4	1	95557520	470
ENSMUSG00000026958	protein_coding	Dpp7	ENSMUST00000139971	processed_transcript		2	-1	25356331	3017
ENSMUSG00000046679	protein_coding	C87436	ENSMUST00000148768	processed_transcript		6	1	86464040	496
ENSMUSG00000090206	protein_coding	Tepp	ENSMUST00000098480	protein_coding	alternative2	8	1	95311598	660
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000102751	protein_coding		2	-1	59882547	1526
ENSMUSG00000107539	protein_coding	Gm44790	ENSMUST00000204137	nonsense_mediated_decay	principal1	6	1	86426658	798
ENSMUSG00000026958	protein_coding	Dpp7	ENSMUST00000135473	processed_transcript		2	-1	25356353	665
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000043335	protein_coding		4	1	95579421	1910
ENSMUSG00000090206	protein_coding	Tepp	ENSMUST00000212056	protein_coding	alternative2	8	1	95311602	613
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000144823	processed_transcript		2	-1	59862726	524
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000114723	protein_coding		2	1	14604306	3945
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000147783	processed_transcript		4	1	95579484	509
ENSMUSG00000026958	protein_coding	Dpp7	ENSMUST00000150305	processed_transcript		2	-1	25356346	650
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000127004	processed_transcript		2	-1	59861680	251
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000150830	protein_coding		4	1	95579489	312
ENSMUSG00000030154	protein_coding	Klrb1f	ENSMUST00000203059	nonsense_mediated_decay		6	1	129045901	1622
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000134012	protein_coding		4	1	95579494	403
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000131654	nonsense_mediated_decay		4	1	95585244	964
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000139689	protein_coding		2	-1	59876842	722
ENSMUSG00000026958	protein_coding	Dpp7	ENSMUST00000125248	processed_transcript		2	-1	25356332	542
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000107091	protein_coding		4	1	95585244	1395
ENSMUSG00000026958	protein_coding	Dpp7	ENSMUST00000133253	processed_transcript		2	-1	25356058	902
ENSMUSG00000030406	protein_coding	Gipr	ENSMUST00000094790	protein_coding	principal1	7	-1	19166127	2856
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000176840	processed_transcript		4	1	95586915	800
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000147766	processed_transcript		4	1	95623549	803
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000138519	processed_transcript		2	-1	59863561	905
ENSMUSG00000033210	protein_coding	Slc9c1	ENSMUST00000159945	protein_coding	principal1	16	1	45535309	3836
ENSMUSG00000026336	protein_coding	Slco6d1	ENSMUST00000027575	protein_coding	principal4	1	1	98421124	2328
ENSMUSG00000026958	protein_coding	Dpp7	ENSMUST00000149953	processed_transcript		2	-1	25352874	466
ENSMUSG00000090206	protein_coding	Tepp	ENSMUST00000153991	protein_coding		8	1	95320438	652
ENSMUSG00000026958	protein_coding	Dpp7	ENSMUST00000144218	processed_transcript		2	-1	25356297	1159
ENSMUSG00000026958	protein_coding	Dpp7	ENSMUST00000131665	processed_transcript		2	-1	25356297	958
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000143742	nonsense_mediated_decay		4	1	95623556	532
ENSMUSG00000113418	unprocessed_pseudogene	Gm47172	ENSMUST00000222053	unprocessed_pseudogene		13	1	28285569	321
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000125742	processed_transcript		4	1	95636887	606
ENSMUSG00000090206	protein_coding	Tepp	ENSMUST00000162294	protein_coding		8	1	95320496	515
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000153119	processed_transcript		4	1	95738408	223
ENSMUSG00000113216	lincRNA	Gm40841	ENSMUST00000222823	lincRNA		13	-1	28420066	3989
ENSMUSG00000113216	lincRNA	Gm40841	ENSMUST00000223198	lincRNA		13	-1	28419863	643
ENSMUSG00000113216	lincRNA	Gm40841	ENSMUST00000221933	lincRNA		13	-1	28419905	683
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000144343	processed_transcript		2	-1	59882557	891
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000130541	protein_coding		4	1	95769509	788
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000156223	protein_coding		4	1	95821978	488
ENSMUSG00000025745	protein_coding	Hadha	ENSMUST00000156859	protein_coding	principal1	5	-1	30155162	4017
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000133809	protein_coding		2	-1	59878164	561
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000140852	processed_transcript		2	-1	59878346	767
ENSMUSG00000034613	protein_coding	Ppm1h	ENSMUST00000161487	protein_coding		10	1	122678778	2931
ENSMUSG00000026336	protein_coding	Slco6d1	ENSMUST00000162468	nonsense_mediated_decay		1	1	98421127	2840
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000140475	protein_coding		2	-1	59882586	715
ENSMUSG00000028573	protein_coding	Fggy	ENSMUST00000142384	nonsense_mediated_decay		4	1	95849625	404
ENSMUSG00000093492	processed_pseudogene	Gm20651	ENSMUST00000177219	processed_pseudogene		4	-1	95562159	329
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000128671	protein_coding		2	-1	59882574	816
ENSMUSG00000021919	protein_coding	Chat	ENSMUST00000070125	protein_coding	principal1	14	-1	32465957	2858
ENSMUSG00000030154	protein_coding	Klrb1f	ENSMUST00000032257	protein_coding	principal1	6	1	129045901	1701
ENSMUSG00000026988	protein_coding	Wdsub1	ENSMUST00000131285	processed_transcript		2	-1	59882591	391
ENSMUSG00000027285	protein_coding	Haus2	ENSMUST00000124187	protein_coding	principal1	2	1	120609383	3154
ENSMUSG00000046556	protein_coding	Zfp319	ENSMUST00000057717	protein_coding	principal1	8	-1	95331950	7232
ENSMUSG00000026336	protein_coding	Slco6d1	ENSMUST00000160796	protein_coding	alternative2	1	1	98421154	2032
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000034980	protein_coding	alternative2	9	1	95857597	8056
ENSMUSG00000021919	protein_coding	Chat	ENSMUST00000227579	protein_coding		14	-1	32460940	912
ENSMUSG00000027285	protein_coding	Haus2	ENSMUST00000110706	protein_coding		2	1	120609595	3055
ENSMUSG00000030154	protein_coding	Klrb1f	ENSMUST00000204508	nonsense_mediated_decay		6	1	129045920	773
ENSMUSG00000021919	protein_coding	Chat	ENSMUST00000226365	protein_coding		14	-1	32465989	879
ENSMUSG00000092040	unprocessed_pseudogene	Gm17198	ENSMUST00000171792	unprocessed_pseudogene		12	-1	103926291	1154
ENSMUSG00000030406	protein_coding	Gipr	ENSMUST00000206857	retained_intron		7	-1	19166127	3182
ENSMUSG00000041891	protein_coding	Lman1	ENSMUST00000048260	protein_coding	principal1	18	-1	66002639	3581
ENSMUSG00000030154	protein_coding	Klrb1f	ENSMUST00000204413	retained_intron		6	1	129045925	437
ENSMUSG00000026336	protein_coding	Slco6d1	ENSMUST00000162782	processed_transcript		1	1	98499889	270
ENSMUSG00000089791	processed_pseudogene	Gm3555	ENSMUST00000160287	processed_pseudogene		1	1	98457768	1395
ENSMUSG00000030154	protein_coding	Klrb1f	ENSMUST00000204320	protein_coding		6	1	129045927	354
ENSMUSG00000045587	protein_coding	Lypd10	ENSMUST00000206826	protein_coding		7	1	24709242	452
ENSMUSG00000021919	protein_coding	Chat	ENSMUST00000227675	retained_intron		14	-1	32460911	2341
ENSMUSG00000030154	protein_coding	Klrb1f	ENSMUST00000204784	processed_transcript		6	1	129049334	344
ENSMUSG00000030406	protein_coding	Gipr	ENSMUST00000206971	nonsense_mediated_decay		7	-1	19166127	1084
ENSMUSG00000107811	antisense	Gm44000	ENSMUST00000205038	antisense		6	-1	129049835	1478
ENSMUSG00000033210	protein_coding	Slc9c1	ENSMUST00000162774	nonsense_mediated_decay		16	1	45539671	3583
ENSMUSG00000107867	TEC	Gm43992	ENSMUST00000204358	TEC		6	-1	129047041	197
ENSMUSG00000030406	protein_coding	Gipr	ENSMUST00000206137	retained_intron		7	-1	19165094	783
ENSMUSG00000033210	protein_coding	Slc9c1	ENSMUST00000162151	nonsense_mediated_decay		16	1	45539671	3474
ENSMUSG00000041891	protein_coding	Lman1	ENSMUST00000236866	protein_coding	principal1	18	-1	66002639	4676
ENSMUSG00000107058	TEC	Gm42545	ENSMUST00000202755	TEC		5	-1	118027370	922
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000185473	retained_intron		9	1	95857639	4597
ENSMUSG00000049539	protein_coding	H1f1	ENSMUST00000055770	protein_coding	principal1	13	1	23763666	741
ENSMUSG00000071185	protein_coding	Olfr1357	ENSMUST00000095473	protein_coding	principal1	10	-1	78618074	1826
ENSMUSG00000041891	protein_coding	Lman1	ENSMUST00000120461	protein_coding	principal1	18	-1	66002621	1741
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000189602	retained_intron		9	1	95857650	982
ENSMUSG00000021919	protein_coding	Chat	ENSMUST00000228420	protein_coding		14	-1	32462042	438
ENSMUSG00000021919	protein_coding	Chat	ENSMUST00000228256	protein_coding		14	-1	32462042	249
ENSMUSG00000085132	antisense	Gm12265	ENSMUST00000139025	antisense		11	1	60240810	468
ENSMUSG00000034445	protein_coding	Cyb561a3	ENSMUST00000237814	protein_coding	principal1	19	1	10577172	3130
ENSMUSG00000045587	protein_coding	Lypd10	ENSMUST00000051714	protein_coding	principal1	7	1	24709259	1172
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000186061	retained_intron		9	1	95857655	4101
ENSMUSG00000109029	lincRNA	Gm44717	ENSMUST00000208133	lincRNA		8	-1	11149246	578
ENSMUSG00000071185	protein_coding	Olfr1357	ENSMUST00000213877	protein_coding	principal1	10	-1	78618074	2161
ENSMUSG00000028289	protein_coding	Epha7	ENSMUST00000029964	protein_coding	principal3	4	1	28813131	6746
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000191269	retained_intron		9	1	95857669	3098
ENSMUSG00000071185	protein_coding	Olfr1357	ENSMUST00000203305	protein_coding	principal1	10	-1	78618074	2286
ENSMUSG00000034445	protein_coding	Cyb561a3	ENSMUST00000237564	protein_coding		19	1	10577448	415
ENSMUSG00000034613	protein_coding	Ppm1h	ENSMUST00000067918	protein_coding	principal1	10	1	122678782	6369
ENSMUSG00000021919	protein_coding	Chat	ENSMUST00000226351	protein_coding		14	-1	32465957	220
ENSMUSG00000082148	processed_pseudogene	Gm12266	ENSMUST00000120311	processed_pseudogene		11	1	60343245	962
ENSMUSG00000071185	protein_coding	Olfr1357	ENSMUST00000205085	protein_coding	principal1	10	-1	78612680	1012
ENSMUSG00000021919	protein_coding	Chat	ENSMUST00000228511	protein_coding		14	-1	32465957	409
ENSMUSG00000043671	protein_coding	Dpy19l3	ENSMUST00000051377	protein_coding	principal1	7	-1	35754454	8006
ENSMUSG00000028289	protein_coding	Epha7	ENSMUST00000108194	protein_coding		4	1	28813152	2323
ENSMUSG00000034445	protein_coding	Cyb561a3	ENSMUST00000236743	protein_coding		19	1	10577451	368
ENSMUSG00000034613	protein_coding	Ppm1h	ENSMUST00000160315	processed_transcript		10	1	122757198	758
ENSMUSG00000040929	protein_coding	Rfx3	ENSMUST00000046898	protein_coding		19	-1	28011048	8988
ENSMUSG00000034445	protein_coding	Cyb561a3	ENSMUST00000235271	protein_coding	principal1	19	1	10577451	2661
ENSMUSG00000070594	protein_coding	Gm4788	ENSMUST00000111986	protein_coding		1	-1	139781168	2935
ENSMUSG00000028289	protein_coding	Epha7	ENSMUST00000108191	protein_coding	alternative1	4	1	28813250	6615
ENSMUSG00000070371	protein_coding	Prss36	ENSMUST00000153110	processed_transcript		7	-1	127935479	1016
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000215311	protein_coding	principal2	9	1	95857706	8102
ENSMUSG00000100241	protein_coding	Slc18a3	ENSMUST00000191501	protein_coding	principal1	14	-1	32464850	2413
ENSMUSG00000034613	protein_coding	Ppm1h	ENSMUST00000159885	retained_intron		10	1	122811244	542
ENSMUSG00000043671	protein_coding	Dpy19l3	ENSMUST00000143590	nonsense_mediated_decay		7	-1	35708092	600
ENSMUSG00000058717	protein_coding	Lypd11	ENSMUST00000205376	protein_coding		7	-1	24726908	807
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000153920	processed_transcript		11	-1	60239176	3791
ENSMUSG00000034445	protein_coding	Cyb561a3	ENSMUST00000237641	protein_coding		19	1	10577454	2149
ENSMUSG00000097794	antisense	Gm2990	ENSMUST00000180662	antisense		14	1	32465042	1118
ENSMUSG00000041891	protein_coding	Lman1	ENSMUST00000236292	retained_intron		18	-1	65998565	1100
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000186127	retained_intron		9	1	95888745	2328
ENSMUSG00000034445	protein_coding	Cyb561a3	ENSMUST00000236352	protein_coding		19	1	10577454	2323
ENSMUSG00000028289	protein_coding	Epha7	ENSMUST00000149030	processed_transcript		4	1	28813326	3187
ENSMUSG00000043671	protein_coding	Dpy19l3	ENSMUST00000206004	retained_intron		7	-1	35708565	357
ENSMUSG00000097794	antisense	Gm2990	ENSMUST00000228806	antisense		14	1	32465222	300
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000188164	retained_intron		9	1	95903664	726
ENSMUSG00000058717	protein_coding	Lypd11	ENSMUST00000081657	protein_coding	principal1	7	-1	24724290	882
ENSMUSG00000041891	protein_coding	Lman1	ENSMUST00000155895	processed_transcript		18	-1	65994888	713
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000190644	retained_intron		9	1	95904521	1832
ENSMUSG00000028289	protein_coding	Epha7	ENSMUST00000136827	processed_transcript		4	1	28815429	648
ENSMUSG00000043671	protein_coding	Dpy19l3	ENSMUST00000150862	retained_intron		7	-1	35708651	656
ENSMUSG00000034445	protein_coding	Cyb561a3	ENSMUST00000237581	protein_coding	principal1	19	1	10577491	2634
ENSMUSG00000043692	protein_coding	Olfr399	ENSMUST00000215915	protein_coding	principal1	11	-1	74056615	1796
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000186997	retained_intron		9	1	95914974	2830
ENSMUSG00000070371	protein_coding	Prss36	ENSMUST00000152697	processed_transcript		7	-1	127935519	1052
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000188088	retained_intron		9	1	95933945	1775
ENSMUSG00000046041	protein_coding	Olfr803	ENSMUST00000204641	protein_coding	principal1	10	-1	129694286	2385
ENSMUSG00000041891	protein_coding	Lman1	ENSMUST00000144793	retained_intron		18	-1	65993660	2141
ENSMUSG00000043671	protein_coding	Dpy19l3	ENSMUST00000144416	nonsense_mediated_decay		7	-1	35729755	673
ENSMUSG00000034613	protein_coding	Ppm1h	ENSMUST00000161065	retained_intron		10	1	122811402	750
ENSMUSG00000034445	protein_coding	Cyb561a3	ENSMUST00000236747	nonsense_mediated_decay		19	1	10578012	1005
ENSMUSG00000043692	protein_coding	Olfr399	ENSMUST00000059440	protein_coding	principal1	11	-1	74054778	1003
ENSMUSG00000034613	protein_coding	Ppm1h	ENSMUST00000161371	processed_transcript		10	1	122811447	403
ENSMUSG00000032409	protein_coding	Atr	ENSMUST00000186524	retained_intron		9	1	95937170	805
ENSMUSG00000022246	protein_coding	Rai14	ENSMUST00000090339	protein_coding	principal2	15	-1	10713540	4909
ENSMUSG00000058717	protein_coding	Lypd11	ENSMUST00000206243	processed_transcript		7	-1	24724551	435
ENSMUSG00000034445	protein_coding	Cyb561a3	ENSMUST00000168445	protein_coding	principal1	19	1	10577454	1474
ENSMUSG00000046041	protein_coding	Olfr803	ENSMUST00000056736	protein_coding	principal1	10	-1	129692039	927
ENSMUSG00000055312	protein_coding	Them7	ENSMUST00000068813	protein_coding	principal1	2	1	105224320	1556
ENSMUSG00000047444	protein_coding	Olfr139	ENSMUST00000214111	protein_coding	principal1	11	-1	74047294	1311
ENSMUSG00000108404	processed_pseudogene	Gm44972	ENSMUST00000206419	processed_pseudogene		7	-1	24730125	406
ENSMUSG00000043671	protein_coding	Dpy19l3	ENSMUST00000127782	retained_intron		7	-1	35723552	1812
ENSMUSG00000100931	antisense	Gm28085	ENSMUST00000189281	antisense		9	-1	96040673	1137
ENSMUSG00000041891	protein_coding	Lman1	ENSMUST00000150133	processed_transcript		18	-1	66019778	802
ENSMUSG00000022246	protein_coding	Rai14	ENSMUST00000227506	protein_coding	alternative2	15	-1	10714098	4732
ENSMUSG00000043671	protein_coding	Dpy19l3	ENSMUST00000205751	processed_transcript		7	-1	35725344	430
ENSMUSG00000070594	protein_coding	Gm4788	ENSMUST00000111989	protein_coding	principal2	1	-1	139781243	3187
ENSMUSG00000043671	protein_coding	Dpy19l3	ENSMUST00000155451	retained_intron		7	-1	35729799	314
ENSMUSG00000022246	protein_coding	Rai14	ENSMUST00000169385	protein_coding	principal2	15	-1	10714567	4759
ENSMUSG00000028289	protein_coding	Epha7	ENSMUST00000129029	processed_transcript		4	1	28871841	737
ENSMUSG00000041891	protein_coding	Lman1	ENSMUST00000143990	protein_coding		18	-1	66022580	960
ENSMUSG00000047444	protein_coding	Olfr139	ENSMUST00000206280	protein_coding	principal1	11	-1	74056551	1059
ENSMUSG00000096655	antisense	1700065D16Rik	ENSMUST00000189279	antisense		9	-1	95857517	393
ENSMUSG00000066914	unprocessed_pseudogene	Olfr831-ps1	ENSMUST00000086496	unprocessed_pseudogene		9	-1	18932981	890
ENSMUSG00000040929	protein_coding	Rfx3	ENSMUST00000174850	protein_coding	principal1	19	-1	28011140	2743
ENSMUSG00000041891	protein_coding	Lman1	ENSMUST00000236070	retained_intron		18	-1	66002618	2057
ENSMUSG00000096655	antisense	1700065D16Rik	ENSMUST00000188975	antisense		9	-1	95857871	506
ENSMUSG00000055312	protein_coding	Them7	ENSMUST00000131060	processed_transcript		2	1	105224342	688
ENSMUSG00000034613	protein_coding	Ppm1h	ENSMUST00000162969	protein_coding		10	1	122895368	811
ENSMUSG00000028289	protein_coding	Epha7	ENSMUST00000129912	processed_transcript		4	1	28871924	648
ENSMUSG00000047444	protein_coding	Olfr139	ENSMUST00000125093	processed_transcript		11	-1	74054033	269
ENSMUSG00000095957	protein_coding	Olfr832	ENSMUST00000218385	protein_coding	principal1	9	1	18937122	4435
ENSMUSG00000043671	protein_coding	Dpy19l3	ENSMUST00000155993	processed_transcript		7	-1	35754399	493
ENSMUSG00000047444	protein_coding	Olfr139	ENSMUST00000050678	protein_coding	principal1	11	-1	74045272	948
ENSMUSG00000022246	protein_coding	Rai14	ENSMUST00000226737	processed_transcript		15	-1	10600087	722
ENSMUSG00000086774	antisense	Gm11915	ENSMUST00000153669	antisense		4	-1	28815076	358
ENSMUSG00000096655	antisense	1700065D16Rik	ENSMUST00000190890	antisense		9	-1	95858322	2903
ENSMUSG00000095957	protein_coding	Olfr832	ENSMUST00000060601	protein_coding	principal1	9	1	18944650	939
ENSMUSG00000025745	protein_coding	Hadha	ENSMUST00000026843	processed_transcript		5	-1	30154976	2552
ENSMUSG00000043671	protein_coding	Dpy19l3	ENSMUST00000124116	retained_intron		7	-1	35754355	1539
ENSMUSG00000025745	protein_coding	Hadha	ENSMUST00000132486	processed_transcript		5	-1	30120305	323
ENSMUSG00000096655	antisense	1700065D16Rik	ENSMUST00000189348	antisense		9	-1	95857871	1540
ENSMUSG00000095401	protein_coding	Olfr804	ENSMUST00000213331	protein_coding	principal1	10	1	129703210	5737
ENSMUSG00000022246	protein_coding	Rai14	ENSMUST00000226530	retained_intron		15	-1	10714624	2375
ENSMUSG00000096655	antisense	1700065D16Rik	ENSMUST00000178038	antisense		9	-1	95858320	2769
ENSMUSG00000025745	protein_coding	Hadha	ENSMUST00000126081	retained_intron		5	-1	30127119	917
ENSMUSG00000095401	protein_coding	Olfr804	ENSMUST00000216747	processed_transcript		10	1	129703233	5144
ENSMUSG00000103507	TEC	Gm38375	ENSMUST00000194610	TEC		9	1	96028624	2227
ENSMUSG00000022246	protein_coding	Rai14	ENSMUST00000227464	retained_intron		15	-1	10713564	594
ENSMUSG00000025745	protein_coding	Hadha	ENSMUST00000196946	processed_transcript		5	-1	30135042	469
ENSMUSG00000022246	protein_coding	Rai14	ENSMUST00000227366	retained_intron		15	-1	10714558	1198
ENSMUSG00000025745	protein_coding	Hadha	ENSMUST00000197491	retained_intron		5	-1	30141027	708
ENSMUSG00000095401	protein_coding	Olfr804	ENSMUST00000077312	protein_coding	principal1	10	1	129704880	945
ENSMUSG00000112511	unprocessed_pseudogene	Gm18704	ENSMUST00000219736	unprocessed_pseudogene		10	-1	32370292	446
ENSMUSG00000025745	protein_coding	Hadha	ENSMUST00000130358	retained_intron		5	-1	30154962	1755
ENSMUSG00000029678	protein_coding	Hyal5	ENSMUST00000200968	protein_coding	principal1	6	1	24857997	2070
ENSMUSG00000015579	protein_coding	Nkx2-5	ENSMUST00000015723	protein_coding	principal1	17	-1	26841565	1525
ENSMUSG00000115667	antisense	Gm10389	ENSMUST00000227861	antisense		15	1	10600293	3468
ENSMUSG00000025745	protein_coding	Hadha	ENSMUST00000199559	retained_intron		5	-1	30149543	2460
ENSMUSG00000115667	antisense	Gm10389	ENSMUST00000228059	antisense		15	1	10600337	2189
ENSMUSG00000025745	protein_coding	Hadha	ENSMUST00000196156	retained_intron		5	-1	30154990	1069
ENSMUSG00000066912	unprocessed_pseudogene	Olfr833-ps1	ENSMUST00000086493	unprocessed_pseudogene		9	-1	18970906	913
ENSMUSG00000070594	protein_coding	Gm4788	ENSMUST00000027612	protein_coding	alternative2	1	-1	139781236	2958
ENSMUSG00000029678	protein_coding	Hyal5	ENSMUST00000201585	processed_transcript		6	1	24890537	571
ENSMUSG00000015579	protein_coding	Nkx2-5	ENSMUST00000235454	protein_coding		17	-1	26845009	1357
ENSMUSG00000082448	processed_pseudogene	Gm11676	ENSMUST00000120443	processed_pseudogene		11	-1	111613306	490
ENSMUSG00000081666	processed_pseudogene	Gm11677	ENSMUST00000121349	processed_pseudogene		11	-1	111725624	977
ENSMUSG00000095525	protein_coding	Olfr834	ENSMUST00000086492	protein_coding	principal1	9	1	18987990	939
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000156027	retained_intron		2	1	14605122	669
ENSMUSG00000029678	protein_coding	Hyal5	ENSMUST00000031689	protein_coding	principal1	6	1	24875909	1838
ENSMUSG00000040929	protein_coding	Rfx3	ENSMUST00000172498	processed_transcript		19	-1	27836846	2091
ENSMUSG00000086752	lincRNA	Gm11674	ENSMUST00000124855	lincRNA		11	-1	111800876	3005
ENSMUSG00000085213	antisense	Gm13091	ENSMUST00000128800	antisense		4	-1	150568544	469
ENSMUSG00000085298	lincRNA	F730035M05Rik	ENSMUST00000145871	lincRNA		12	1	70227841	1296
ENSMUSG00000089636	antisense	1700058P15Rik	ENSMUST00000159981	antisense		7	1	19258492	413
ENSMUSG00000021179	protein_coding	Nrde2	ENSMUST00000021596	protein_coding	principal1	12	-1	100159648	3718
ENSMUSG00000040929	protein_coding	Rfx3	ENSMUST00000172907	protein_coding	principal1	19	-1	28011045	2621
ENSMUSG00000024666	protein_coding	Tmem138	ENSMUST00000236099	protein_coding	principal1	19	-1	10577087	1529
ENSMUSG00000092021	polymorphic_pseudogene	Gbp11	ENSMUST00000100960	polymorphic_pseudogene		5	-1	105346472	2692
ENSMUSG00000029103	protein_coding	Lrpap1	ENSMUST00000030986	protein_coding	principal1	5	-1	35105766	2981
ENSMUSG00000021179	protein_coding	Nrde2	ENSMUST00000223314	retained_intron		12	-1	100129772	684
ENSMUSG00000040929	protein_coding	Rfx3	ENSMUST00000173863	nonsense_mediated_decay		19	-1	27900895	2053
ENSMUSG00000024666	protein_coding	Tmem138	ENSMUST00000025568	protein_coding	principal1	19	-1	10577362	1590
ENSMUSG00000092021	polymorphic_pseudogene	Gbp11	ENSMUST00000171587	protein_coding	principal1	5	-1	105343929	1329
ENSMUSG00000021179	protein_coding	Nrde2	ENSMUST00000221954	protein_coding		12	-1	100159653	735
ENSMUSG00000040929	protein_coding	Rfx3	ENSMUST00000173161	retained_intron		19	-1	28011166	3039
ENSMUSG00000029103	protein_coding	Lrpap1	ENSMUST00000153664	protein_coding		5	-1	35102514	716
ENSMUSG00000112674	lincRNA	Gm47459	ENSMUST00000219154	lincRNA		10	1	78629554	1253
ENSMUSG00000109086	processed_pseudogene	Gm5596	ENSMUST00000207988	processed_pseudogene		7	-1	57881226	2421
ENSMUSG00000024666	protein_coding	Tmem138	ENSMUST00000235990	nonsense_mediated_decay		19	-1	10577107	1260
ENSMUSG00000112017	processed_pseudogene	Gm7842	ENSMUST00000217691	processed_pseudogene		10	-1	78630300	1379
ENSMUSG00000040929	protein_coding	Rfx3	ENSMUST00000174420	protein_coding		19	-1	28010790	343
ENSMUSG00000069670	protein_coding	Nkain2	ENSMUST00000191234	protein_coding	principal2	10	-1	32890461	3760
ENSMUSG00000070371	protein_coding	Prss36	ENSMUST00000118755	protein_coding	principal2	7	-1	127946725	3028
ENSMUSG00000024666	protein_coding	Tmem138	ENSMUST00000236185	protein_coding		19	-1	10577107	1593
ENSMUSG00000069670	protein_coding	Nkain2	ENSMUST00000218645	protein_coding	alternative2	10	-1	32889696	703
ENSMUSG00000109475	processed_pseudogene	Gm34272	ENSMUST00000208886	processed_pseudogene		7	1	57894840	253
ENSMUSG00000079553	protein_coding	Kifc1	ENSMUST00000173492	protein_coding	principal2	17	-1	33890661	2357
ENSMUSG00000040929	protein_coding	Rfx3	ENSMUST00000165566	protein_coding	principal1	19	-1	27982948	9146
ENSMUSG00000109339	processed_pseudogene	Gm18127	ENSMUST00000208479	processed_pseudogene		7	-1	57900687	725
ENSMUSG00000029103	protein_coding	Lrpap1	ENSMUST00000147028	retained_intron		5	-1	35105689	1573
ENSMUSG00000028044	protein_coding	Cks1b	ENSMUST00000029679	protein_coding	principal1	3	-1	89418383	849
ENSMUSG00000024666	protein_coding	Tmem138	ENSMUST00000236958	processed_transcript		19	-1	10577081	853
ENSMUSG00000070371	protein_coding	Prss36	ENSMUST00000156152	protein_coding		7	-1	127935450	1132
ENSMUSG00000109348	processed_pseudogene	Gm44852	ENSMUST00000207950	processed_pseudogene		7	1	58518162	369
ENSMUSG00000069670	protein_coding	Nkain2	ENSMUST00000219125	protein_coding		10	-1	32889848	1166
ENSMUSG00000079553	protein_coding	Kifc1	ENSMUST00000173982	protein_coding		17	-1	33883226	406
ENSMUSG00000070371	protein_coding	Prss36	ENSMUST00000141385	protein_coding		7	-1	127935429	480
ENSMUSG00000069670	protein_coding	Nkain2	ENSMUST00000219306	processed_transcript		10	-1	32890461	1088
ENSMUSG00000092182	antisense	Gm20407	ENSMUST00000172891	antisense		19	1	27994197	598
ENSMUSG00000029103	protein_coding	Lrpap1	ENSMUST00000152028	retained_intron		5	-1	35105696	630
ENSMUSG00000069670	protein_coding	Nkain2	ENSMUST00000092602	protein_coding		10	-1	32890462	558
ENSMUSG00000069670	protein_coding	Nkain2	ENSMUST00000092603	protein_coding		10	-1	32410335	273
ENSMUSG00000108877	processed_pseudogene	Gm45157	ENSMUST00000208729	processed_pseudogene		7	1	58554920	401
ENSMUSG00000029103	protein_coding	Lrpap1	ENSMUST00000132754	processed_transcript		5	-1	35104540	436
ENSMUSG00000090714	protein_coding	Zscan4d	ENSMUST00000067210	protein_coding	principal1	7	-1	11166159	2272
ENSMUSG00000112409	TEC	C030006N10Rik	ENSMUST00000219077	TEC		10	-1	32279693	517
ENSMUSG00000070371	protein_coding	Prss36	ENSMUST00000150591	retained_intron		7	-1	127936097	1012
ENSMUSG00000112914	TEC	Gm47702	ENSMUST00000220196	TEC		10	-1	32639486	656
ENSMUSG00000028044	protein_coding	Cks1b	ENSMUST00000107422	protein_coding		3	-1	89418017	766
ENSMUSG00000115199	protein_coding	Vmn1r15	ENSMUST00000228297	protein_coding	principal1	6	1	57257952	2021
ENSMUSG00000112367	TEC	A230081H15Rik	ENSMUST00000218326	TEC		10	-1	32266539	2929
ENSMUSG00000070371	protein_coding	Prss36	ENSMUST00000144192	processed_transcript		7	-1	127935514	176
ENSMUSG00000070371	protein_coding	Prss36	ENSMUST00000094026	protein_coding	alternative2	7	-1	127946725	3061
ENSMUSG00000028044	protein_coding	Cks1b	ENSMUST00000183484	nonsense_mediated_decay		3	-1	89418219	359
ENSMUSG00000112906	processed_pseudogene	Gm18189	ENSMUST00000218153	processed_pseudogene		10	-1	31973669	1951
ENSMUSG00000086748	processed_transcript	Gm13261	ENSMUST00000137351	processed_transcript		2	-1	10374041	1020
ENSMUSG00000112866	TEC	Gm47704	ENSMUST00000219333	TEC		10	1	31867912	3190
ENSMUSG00000019301	protein_coding	Hsd17b1	ENSMUST00000019445	protein_coding	principal1	11	1	101078411	1339
ENSMUSG00000081088	processed_pseudogene	Gm11679	ENSMUST00000121830	processed_pseudogene		11	-1	112043578	779
ENSMUSG00000048022	protein_coding	Tmem229a	ENSMUST00000127247	protein_coding	principal1	6	-1	24956297	5157
ENSMUSG00000114675	processed_pseudogene	Gm18834	ENSMUST00000224221	processed_pseudogene		14	-1	37183065	862
ENSMUSG00000112075	TEC	Gm47700	ENSMUST00000219777	TEC		10	-1	32486999	2510
ENSMUSG00000074939	protein_coding	Chrm5	ENSMUST00000099589	protein_coding	principal1	2	-1	112480769	1599
ENSMUSG00000072849	protein_coding	Serpina1e	ENSMUST00000122229	protein_coding	principal1	12	-1	103958975	1575
ENSMUSG00000109595	processed_pseudogene	Gm18204	ENSMUST00000209835	processed_pseudogene		7	1	11169504	793
ENSMUSG00000032908	protein_coding	Sgpp2	ENSMUST00000036172	protein_coding	principal1	1	1	78310345	4002
ENSMUSG00000085324	lincRNA	Gm11680	ENSMUST00000146550	lincRNA		11	1	112107438	439
ENSMUSG00000116653	processed_pseudogene	Gm8900	ENSMUST00000231662	processed_pseudogene		16	-1	55940711	373
ENSMUSG00000114741	TEC	Gm47971	ENSMUST00000223601	TEC		14	-1	37467898	2077
ENSMUSG00000086425	lincRNA	F730016J06Rik	ENSMUST00000126140	lincRNA		2	1	28095477	1344
ENSMUSG00000072849	protein_coding	Serpina1e	ENSMUST00000085054	protein_coding	principal1	12	-1	103956898	1295
ENSMUSG00000114334	lincRNA	Gm31393	ENSMUST00000224767	lincRNA		14	-1	37606788	767
ENSMUSG00000110379	unprocessed_pseudogene	Gm6909	ENSMUST00000209825	unprocessed_pseudogene		7	1	11182400	989
ENSMUSG00000114766	processed_pseudogene	Gm5203	ENSMUST00000225782	processed_pseudogene		14	1	37722117	821
ENSMUSG00000086425	lincRNA	F730016J06Rik	ENSMUST00000156508	lincRNA		2	1	28095483	2593
ENSMUSG00000112689	processed_pseudogene	Gm47476	ENSMUST00000219160	processed_pseudogene		10	-1	78698808	3838
ENSMUSG00000114227	processed_pseudogene	Gm5204	ENSMUST00000223652	processed_pseudogene		14	-1	37912698	851
ENSMUSG00000079553	protein_coding	Kifc1	ENSMUST00000174507	retained_intron		17	-1	33890631	2118
ENSMUSG00000111946	processed_pseudogene	Gm47495	ENSMUST00000219903	processed_pseudogene		10	1	78699609	265
ENSMUSG00000086425	lincRNA	F730016J06Rik	ENSMUST00000128888	lincRNA		2	1	28118207	3699
ENSMUSG00000079553	protein_coding	Kifc1	ENSMUST00000173885	retained_intron		17	-1	33890604	1865
ENSMUSG00000097237	lincRNA	Gm26519	ENSMUST00000181193	lincRNA		5	1	105401245	2249
ENSMUSG00000079553	protein_coding	Kifc1	ENSMUST00000173386	protein_coding		17	-1	33890539	698
ENSMUSG00000106438	lincRNA	Gm32051	ENSMUST00000196818	lincRNA		5	1	105409367	709
ENSMUSG00000106438	lincRNA	Gm32051	ENSMUST00000197905	lincRNA		5	1	105413286	2385
ENSMUSG00000106526	antisense	Gm42604	ENSMUST00000200077	antisense		5	-1	96739364	801
ENSMUSG00000079553	protein_coding	Kifc1	ENSMUST00000172608	retained_intron		17	-1	33890596	736
ENSMUSG00000105446	TEC	Gm42605	ENSMUST00000199565	TEC		5	1	96485766	385
ENSMUSG00000106263	antisense	Gm33050	ENSMUST00000198132	antisense		5	-1	96457743	501
ENSMUSG00000058669	protein_coding	Nkx2-9	ENSMUST00000072631	protein_coding	principal1	12	-1	56613284	1264
ENSMUSG00000030403	protein_coding	Vasp	ENSMUST00000032561	protein_coding	principal1	7	-1	19271817	2215
ENSMUSG00000030403	protein_coding	Vasp	ENSMUST00000161488	retained_intron		7	-1	19258131	441
ENSMUSG00000112843	lincRNA	Gm46224	ENSMUST00000220221	lincRNA		10	1	51526340	1242
ENSMUSG00000024112	protein_coding	Cacna1h	ENSMUST00000159610	protein_coding	alternative2	17	-1	25433783	8230
ENSMUSG00000030403	protein_coding	Vasp	ENSMUST00000162717	processed_transcript		7	-1	19261076	274
ENSMUSG00000112226	processed_pseudogene	Gm48786	ENSMUST00000219702	processed_pseudogene		10	1	51543035	3814
ENSMUSG00000112618	TEC	Gm48835	ENSMUST00000218378	TEC		12	1	56628984	1279
ENSMUSG00000079553	protein_coding	Kifc1	ENSMUST00000114361	protein_coding	alternative2	17	-1	33890633	2260
ENSMUSG00000069476	protein_coding	Zfp616	ENSMUST00000108463	protein_coding		11	1	74069955	1825
ENSMUSG00000040919	protein_coding	4930505A04Rik	ENSMUST00000041763	protein_coding	principal1	11	-1	30471808	904
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000042561	protein_coding	principal1	11	1	75531698	6891
ENSMUSG00000024112	protein_coding	Cacna1h	ENSMUST00000159048	protein_coding	alternative2	17	-1	25433783	8174
ENSMUSG00000112645	processed_pseudogene	Gm48787	ENSMUST00000219893	processed_pseudogene		10	-1	51551447	379
ENSMUSG00000030403	protein_coding	Vasp	ENSMUST00000206229	processed_transcript		7	-1	19266546	844
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000121759	protein_coding	principal4	16	-1	91011308	7090
ENSMUSG00000112886	processed_pseudogene	Gm18339	ENSMUST00000218074	processed_pseudogene		12	1	56666971	888
ENSMUSG00000069476	protein_coding	Zfp616	ENSMUST00000074813	protein_coding		11	1	74069955	5014
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000108433	protein_coding	principal1	11	1	75531698	3236
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000193262	processed_transcript		2	1	14739216	4146
ENSMUSG00000024112	protein_coding	Cacna1h	ENSMUST00000161035	protein_coding		17	-1	25380651	879
ENSMUSG00000069476	protein_coding	Zfp616	ENSMUST00000137407	processed_transcript		11	1	74070165	709
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000137746	retained_intron		2	1	14763129	2144
ENSMUSG00000040919	protein_coding	4930505A04Rik	ENSMUST00000152718	nonsense_mediated_decay		11	-1	30471827	990
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000118390	protein_coding		16	-1	91011113	6910
ENSMUSG00000069476	protein_coding	Zfp616	ENSMUST00000116546	protein_coding		11	1	74070185	531
ENSMUSG00000069476	protein_coding	Zfp616	ENSMUST00000178159	protein_coding	principal1	11	1	74082907	2964
ENSMUSG00000024112	protein_coding	Cacna1h	ENSMUST00000161658	nonsense_mediated_decay		17	-1	25380279	524
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000194921	retained_intron		2	1	14824026	1052
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000151891	retained_intron		11	1	75560821	744
ENSMUSG00000081932	processed_pseudogene	Gm12331	ENSMUST00000119927	processed_pseudogene		11	-1	74078140	622
ENSMUSG00000044145	protein_coding	1810024B03Rik	ENSMUST00000056146	protein_coding	principal1	2	-1	127208280	1266
ENSMUSG00000117903	processed_pseudogene	Gm29819	ENSMUST00000236791	processed_pseudogene		17	-1	26880608	153
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000154276	protein_coding		16	-1	90950419	3501
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000193800	protein_coding	principal3	2	1	14824092	2117
ENSMUSG00000024112	protein_coding	Cacna1h	ENSMUST00000159331	retained_intron		17	-1	25378943	412
ENSMUSG00000081162	unprocessed_pseudogene	Olfr400-ps1	ENSMUST00000118094	unprocessed_pseudogene		11	1	74104841	955
ENSMUSG00000024112	protein_coding	Cacna1h	ENSMUST00000162820	retained_intron		17	-1	25389472	643
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000114718	retained_intron		2	1	14873655	867
ENSMUSG00000033898	protein_coding	Cfhr2	ENSMUST00000194186	protein_coding		1	-1	139858690	1189
ENSMUSG00000024112	protein_coding	Cacna1h	ENSMUST00000161454	retained_intron		17	-1	25433768	1894
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000129041	processed_transcript		16	-1	90946655	772
ENSMUSG00000114634	TEC	F830210D05Rik	ENSMUST00000224647	TEC		13	-1	81929687	1903
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000191903	retained_intron		2	1	14873656	942
ENSMUSG00000044145	protein_coding	1810024B03Rik	ENSMUST00000150956	processed_transcript		2	-1	127208254	2364
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000129743	protein_coding		16	-1	90944871	547
ENSMUSG00000033898	protein_coding	Cfhr2	ENSMUST00000239380	protein_coding	alternative2	1	-1	139858718	1828
ENSMUSG00000114461	lincRNA	Gm48155	ENSMUST00000224753	lincRNA		13	1	82089757	526
ENSMUSG00000024301	protein_coding	Kifc5b	ENSMUST00000236476	retained_intron		17	1	26917091	819
ENSMUSG00000024112	protein_coding	Cacna1h	ENSMUST00000159623	protein_coding		17	-1	25433278	551
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000231524	protein_coding		16	-1	90955410	727
ENSMUSG00000070380	protein_coding	Olfr401	ENSMUST00000213754	protein_coding	principal1	11	1	74113712	2227
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000145901	processed_transcript		11	1	75566007	2292
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000114719	protein_coding	alternative1	2	1	14873669	2117
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000125032	protein_coding		16	-1	90951978	600
ENSMUSG00000070380	protein_coding	Olfr401	ENSMUST00000079827	protein_coding	principal1	11	1	74121291	948
ENSMUSG00000024112	protein_coding	Cacna1h	ENSMUST00000159052	retained_intron		17	-1	25433783	1662
ENSMUSG00000033898	protein_coding	Cfhr2	ENSMUST00000094489	protein_coding	principal2	1	-1	139858702	1609
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000123719	retained_intron		2	1	14873991	3457
ENSMUSG00000021069	protein_coding	Pygl	ENSMUST00000071250	protein_coding	principal1	12	-1	70227683	2825
ENSMUSG00000114932	processed_pseudogene	Gm4936	ENSMUST00000224376	processed_pseudogene		13	-1	82379643	859
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000231472	nonsense_mediated_decay		16	-1	90969345	739
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000134112	retained_intron		11	1	75566703	841
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000195841	protein_coding		2	1	14874421	503
ENSMUSG00000114339	processed_pseudogene	Gm47974	ENSMUST00000225855	processed_pseudogene		14	1	38047983	3154
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000155981	processed_transcript		11	1	75566816	407
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000127226	protein_coding		11	1	75532138	613
ENSMUSG00000021069	protein_coding	Pygl	ENSMUST00000161083	protein_coding		12	-1	70231488	2992
ENSMUSG00000024112	protein_coding	Cacna1h	ENSMUST00000078496	protein_coding	principal2	17	-1	25433783	8220
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000148676	retained_intron		2	1	14874748	5030
ENSMUSG00000114450	processed_pseudogene	Gm18523	ENSMUST00000224927	processed_pseudogene		14	1	38074111	791
ENSMUSG00000001497	protein_coding	Pax9	ENSMUST00000153250	protein_coding	principal1	12	1	56691767	4232
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000193452	retained_intron		2	1	14874752	2802
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000143035	protein_coding		11	1	75531743	1161
ENSMUSG00000021069	protein_coding	Pygl	ENSMUST00000162613	retained_intron		12	-1	70197841	329
ENSMUSG00000021069	protein_coding	Pygl	ENSMUST00000222093	retained_intron		12	-1	70207348	3150
ENSMUSG00000114219	lincRNA	Gm31456	ENSMUST00000225614	lincRNA		14	1	38317904	1132
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000193522	protein_coding		2	1	14960776	430
ENSMUSG00000057914	protein_coding	Cacnb2	ENSMUST00000144423	retained_intron		2	1	14982113	935
ENSMUSG00000001497	protein_coding	Pax9	ENSMUST00000152848	retained_intron		12	1	56695729	2309
ENSMUSG00000091911	unprocessed_pseudogene	Gm9587	ENSMUST00000172449	unprocessed_pseudogene		14	-1	43771115	454
ENSMUSG00000062278	protein_coding	Gm11562	ENSMUST00000073853	protein_coding	principal1	11	-1	99620435	817
ENSMUSG00000081008	processed_pseudogene	Gm13314	ENSMUST00000118742	processed_pseudogene		2	-1	14691728	335
ENSMUSG00000093889	unprocessed_pseudogene	Ang-ps2	ENSMUST00000178173	unprocessed_pseudogene		14	1	43864917	433
ENSMUSG00000115354	lincRNA	Gm49083	ENSMUST00000227212	lincRNA		14	-1	43812383	2385
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000118246	retained_intron		16	-1	91011061	2743
ENSMUSG00000027286	protein_coding	Lrrc57	ENSMUST00000102496	protein_coding	principal1	2	-1	120609315	1848
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000149727	protein_coding		11	1	75531694	496
ENSMUSG00000115619	unprocessed_pseudogene	Gm49082	ENSMUST00000227406	unprocessed_pseudogene		14	1	43787317	439
ENSMUSG00000101440	lincRNA	Gm29425	ENSMUST00000189421	lincRNA		Y	1	70379763	1499
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000152775	processed_transcript		11	1	75538008	372
ENSMUSG00000001497	protein_coding	Pax9	ENSMUST00000001538	protein_coding	principal1	12	1	56695639	4166
ENSMUSG00000063251	protein_coding	Krtap4-1	ENSMUST00000081007	protein_coding	principal1	11	-1	99628238	1015
ENSMUSG00000101440	lincRNA	Gm29425	ENSMUST00000186959	lincRNA		Y	1	70380216	438
ENSMUSG00000042793	protein_coding	Lgr6	ENSMUST00000044828	protein_coding	principal1	1	-1	135105276	6675
ENSMUSG00000021069	protein_coding	Pygl	ENSMUST00000161840	retained_intron		12	-1	70227612	925
ENSMUSG00000038178	protein_coding	Slc43a2	ENSMUST00000169547	protein_coding	principal1	11	1	75532112	7145
ENSMUSG00000021069	protein_coding	Pygl	ENSMUST00000166609	processed_transcript		12	-1	70227345	459
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000130813	protein_coding		16	-1	91011095	2224
ENSMUSG00000027286	protein_coding	Lrrc57	ENSMUST00000102497	protein_coding	principal1	2	-1	120609355	1962
ENSMUSG00000091584	protein_coding	Gm8180	ENSMUST00000163599	protein_coding	principal1	14	-1	43784745	1392
ENSMUSG00000113101	lincRNA	Gm33424	ENSMUST00000222317	lincRNA		13	1	53016202	257
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000156140	retained_intron		16	-1	91011063	947
ENSMUSG00000089816	unprocessed_pseudogene	Ear-ps8	ENSMUST00000161935	unprocessed_pseudogene		14	-1	43902038	354
ENSMUSG00000022973	protein_coding	Synj1	ENSMUST00000170853	protein_coding	alternative2	16	-1	91011095	7012
ENSMUSG00000112952	lincRNA	Gm48336	ENSMUST00000222184	lincRNA		13	1	53028918	2973
ENSMUSG00000115844	unprocessed_pseudogene	Gm49081	ENSMUST00000227998	unprocessed_pseudogene		14	1	43797289	202
ENSMUSG00000072600	transcribed_unprocessed_pseudogene	Ear-ps9	ENSMUST00000161963	transcribed_unprocessed_pseudogene		14	-1	43875334	460
ENSMUSG00000109715	antisense	Gm45606	ENSMUST00000209836	antisense		11	-1	75533071	2795
ENSMUSG00000072600	transcribed_unprocessed_pseudogene	Ear-ps9	ENSMUST00000226796	processed_transcript		14	-1	43875537	245
ENSMUSG00000061186	protein_coding	Sfmbt2	ENSMUST00000114862	protein_coding		2	1	10370510	1763
ENSMUSG00000108813	processed_pseudogene	Rpl19-ps9	ENSMUST00000205423	processed_pseudogene		6	1	71683298	588
ENSMUSG00000115659	lincRNA	Gm41138	ENSMUST00000226769	lincRNA		14	-1	43800707	1144
ENSMUSG00000042793	protein_coding	Lgr6	ENSMUST00000137968	protein_coding		1	-1	135017779	2820
ENSMUSG00000115659	lincRNA	Gm41138	ENSMUST00000227217	lincRNA		14	-1	43800707	1443
ENSMUSG00000027286	protein_coding	Lrrc57	ENSMUST00000102498	protein_coding	principal1	2	-1	120609510	1901
ENSMUSG00000115659	lincRNA	Gm41138	ENSMUST00000226176	lincRNA		14	-1	43800733	723
ENSMUSG00000115659	lincRNA	Gm41138	ENSMUST00000228900	lincRNA		14	-1	43800750	867
ENSMUSG00000061186	protein_coding	Sfmbt2	ENSMUST00000114861	protein_coding		2	1	10370511	1813
ENSMUSG00000085801	lincRNA	1700013N06Rik	ENSMUST00000156376	lincRNA		12	1	106837982	663
ENSMUSG00000115659	lincRNA	Gm41138	ENSMUST00000228828	lincRNA		14	-1	43800705	411
ENSMUSG00000027286	protein_coding	Lrrc57	ENSMUST00000102499	protein_coding	principal1	2	-1	120609520	1961
ENSMUSG00000042793	protein_coding	Lgr6	ENSMUST00000139369	processed_transcript		1	-1	135022091	360
ENSMUSG00000083861	processed_pseudogene	Gm9599	ENSMUST00000117473	processed_pseudogene		12	-1	106886926	481
ENSMUSG00000089654	unprocessed_pseudogene	Ear-ps12	ENSMUST00000161720	unprocessed_pseudogene		14	-1	43854179	451
ENSMUSG00000110565	unprocessed_pseudogene	Gm45814	ENSMUST00000212646	unprocessed_pseudogene		9	1	19029218	775
ENSMUSG00000027286	protein_coding	Lrrc57	ENSMUST00000135465	protein_coding		2	-1	120607972	640
ENSMUSG00000115272	lincRNA	Gm49965	ENSMUST00000228724	lincRNA		14	1	43762152	388
ENSMUSG00000039852	protein_coding	Rere	ENSMUST00000105682	protein_coding	principal2	4	1	150281646	7728
ENSMUSG00000115272	lincRNA	Gm49965	ENSMUST00000227949	lincRNA		14	1	43766461	885
ENSMUSG00000061186	protein_coding	Sfmbt2	ENSMUST00000126531	processed_transcript		2	1	10370518	659
ENSMUSG00000024301	protein_coding	Kifc5b	ENSMUST00000078961	protein_coding	principal1	17	1	26917091	2631
ENSMUSG00000115272	lincRNA	Gm49965	ENSMUST00000227370	lincRNA		14	1	43766469	1032
ENSMUSG00000027286	protein_coding	Lrrc57	ENSMUST00000133612	protein_coding		2	-1	120609508	913
ENSMUSG00000115272	lincRNA	Gm49965	ENSMUST00000226367	lincRNA		14	1	43853318	384
ENSMUSG00000086319	lincRNA	Gm16087	ENSMUST00000124395	lincRNA		12	-1	106955928	964
ENSMUSG00000103132	TEC	Gm37978	ENSMUST00000194736	TEC		6	1	28568072	2915
ENSMUSG00000026798	protein_coding	Coq4	ENSMUST00000143616	nonsense_mediated_decay		2	1	29787493	3026
ENSMUSG00000031792	protein_coding	Usb1	ENSMUST00000034245	protein_coding	principal1	8	1	95332284	1758
ENSMUSG00000061186	protein_coding	Sfmbt2	ENSMUST00000114864	protein_coding		2	1	10372436	1901
ENSMUSG00000027286	protein_coding	Lrrc57	ENSMUST00000141932	retained_intron		2	-1	120609302	394
ENSMUSG00000104325	TEC	Gm37321	ENSMUST00000195742	TEC		6	1	28563490	1872
ENSMUSG00000039852	protein_coding	Rere	ENSMUST00000129188	processed_transcript		4	1	150281812	417
ENSMUSG00000096858	protein_coding	Olfr805	ENSMUST00000216794	protein_coding	principal1	10	-1	129729361	3199
ENSMUSG00000036655	protein_coding	Colec11	ENSMUST00000036136	protein_coding	principal1	12	-1	28623330	1423
ENSMUSG00000026798	protein_coding	Coq4	ENSMUST00000176348	nonsense_mediated_decay		2	1	29788220	860
ENSMUSG00000024301	protein_coding	Kifc5b	ENSMUST00000235998	processed_transcript		17	1	26917121	2125
ENSMUSG00000039852	protein_coding	Rere	ENSMUST00000131600	protein_coding		4	1	150406394	535
ENSMUSG00000031792	protein_coding	Usb1	ENSMUST00000213059	nonsense_mediated_decay		8	1	95332303	335
ENSMUSG00000061186	protein_coding	Sfmbt2	ENSMUST00000145398	processed_transcript		2	1	10372448	367
ENSMUSG00000047777	protein_coding	Phf13	ENSMUST00000055688	protein_coding	principal1	4	-1	151996258	3205
ENSMUSG00000096858	protein_coding	Olfr805	ENSMUST00000217219	protein_coding	principal1	10	-1	129729375	3314
ENSMUSG00000039852	protein_coding	Rere	ENSMUST00000105680	protein_coding	alternative2	4	1	150488393	6503
ENSMUSG00000036655	protein_coding	Colec11	ENSMUST00000220655	nonsense_mediated_decay		12	-1	28623377	1603
ENSMUSG00000031792	protein_coding	Usb1	ENSMUST00000145060	retained_intron		8	1	95332325	871
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000168362	protein_coding		6	1	28475139	351
ENSMUSG00000024301	protein_coding	Kifc5b	ENSMUST00000235206	retained_intron		17	1	26917173	1845
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000212571	protein_coding		8	1	123373753	2649
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000124028	processed_transcript		11	-1	112711356	1952
ENSMUSG00000096858	protein_coding	Olfr805	ENSMUST00000204717	protein_coding		10	-1	129729292	313
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000102927	protein_coding	principal3	17	-1	24141595	7161
ENSMUSG00000039852	protein_coding	Rere	ENSMUST00000142379	processed_transcript		4	1	150569588	379
ENSMUSG00000072601	protein_coding	Ear1	ENSMUST00000100691	protein_coding	principal1	14	-1	43819639	713
ENSMUSG00000036655	protein_coding	Colec11	ENSMUST00000220836	protein_coding		12	-1	28623260	887
ENSMUSG00000031792	protein_coding	Usb1	ENSMUST00000126180	protein_coding		8	1	95332596	1082
ENSMUSG00000096858	protein_coding	Olfr805	ENSMUST00000078876	protein_coding	principal1	10	-1	129723542	960
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000212470	protein_coding		8	1	123373784	2572
ENSMUSG00000031792	protein_coding	Usb1	ENSMUST00000151223	retained_intron		8	1	95345154	527
ENSMUSG00000039852	protein_coding	Rere	ENSMUST00000137112	processed_transcript		4	1	150569657	496
ENSMUSG00000072601	protein_coding	Ear1	ENSMUST00000179200	protein_coding	principal1	14	-1	43875517	519
ENSMUSG00000044649	protein_coding	Krtap4-2	ENSMUST00000058987	protein_coding	principal1	11	-1	99635084	974
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000131057	processed_transcript		11	-1	112711341	1402
ENSMUSG00000038416	protein_coding	Cdc16	ENSMUST00000130173	protein_coding		8	1	13757676	923
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000025897	protein_coding	principal1	19	1	6341160	4644
ENSMUSG00000039852	protein_coding	Rere	ENSMUST00000219467	protein_coding		4	1	150615415	1305
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000084513	protein_coding	principal4	7	1	130577484	9029
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000155766	processed_transcript		11	-1	112711341	1120
ENSMUSG00000035472	protein_coding	Slc25a21	ENSMUST00000044634	protein_coding	principal3	12	-1	57197472	2609
ENSMUSG00000020471	protein_coding	Pold2	ENSMUST00000102922	protein_coding	principal1	11	-1	5878292	1646
ENSMUSG00000035575	protein_coding	Utp6	ENSMUST00000108241	protein_coding	principal1	11	-1	79962379	2308
ENSMUSG00000039852	protein_coding	Rere	ENSMUST00000136646	protein_coding		4	1	150617266	939
ENSMUSG00000045204	protein_coding	Olfr835	ENSMUST00000213018	protein_coding	principal1	9	1	19032735	2690
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000137081	processed_transcript		11	-1	112781976	1294
ENSMUSG00000045204	protein_coding	Olfr835	ENSMUST00000059315	protein_coding	principal1	9	1	19035125	936
ENSMUSG00000085787	processed_pseudogene	Gm13092	ENSMUST00000136346	processed_pseudogene		4	-1	150315436	260
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000108840	protein_coding		8	1	123373823	2582
ENSMUSG00000035472	protein_coding	Slc25a21	ENSMUST00000217690	protein_coding	alternative2	12	-1	57160643	1388
ENSMUSG00000032501	protein_coding	Trib1	ENSMUST00000067543	protein_coding	principal1	15	1	59648350	4330
ENSMUSG00000020471	protein_coding	Pold2	ENSMUST00000141907	retained_intron		11	-1	5873191	498
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000139027	processed_transcript		11	-1	112711339	649
ENSMUSG00000020471	protein_coding	Pold2	ENSMUST00000153995	protein_coding		11	-1	5877662	864
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000144036	processed_transcript		11	-1	112691518	705
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000115411	protein_coding		17	-1	24141553	1724
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000143060	processed_transcript		11	-1	112711356	679
ENSMUSG00000020471	protein_coding	Pold2	ENSMUST00000136714	retained_intron		11	-1	5876764	611
ENSMUSG00000020471	protein_coding	Pold2	ENSMUST00000134957	processed_transcript		11	-1	5878212	342
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000149624	processed_transcript		19	1	6341191	398
ENSMUSG00000035472	protein_coding	Slc25a21	ENSMUST00000160709	processed_transcript		12	-1	56775360	558
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000115409	protein_coding		17	-1	24141570	4623
ENSMUSG00000032501	protein_coding	Trib1	ENSMUST00000118228	protein_coding		15	1	59648653	3081
ENSMUSG00000086589	processed_transcript	Gm12915	ENSMUST00000131381	processed_transcript		4	-1	124751354	1499
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000115407	protein_coding		17	-1	24141576	1730
ENSMUSG00000116753	lincRNA	Gm36001	ENSMUST00000232652	lincRNA		16	-1	90550609	1423
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000160152	retained_intron		1	1	161034422	712
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000057934	protein_coding	principal1	8	1	123373824	2738
ENSMUSG00000035472	protein_coding	Slc25a21	ENSMUST00000160892	retained_intron		12	-1	56980393	2116
ENSMUSG00000035472	protein_coding	Slc25a21	ENSMUST00000110680	protein_coding	alternative2	12	-1	57159244	918
ENSMUSG00000035575	protein_coding	Utp6	ENSMUST00000043152	protein_coding	principal1	11	-1	79962390	3877
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000142413	processed_transcript		11	-1	112711363	861
ENSMUSG00000046119	lincRNA	1110008E08Rik	ENSMUST00000183621	lincRNA		16	1	90554164	723
ENSMUSG00000089894	antisense	Gm15524	ENSMUST00000159874	antisense		12	-1	56692964	463
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000211932	protein_coding		8	1	123373856	5002
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000143760	processed_transcript		11	-1	112711340	901
ENSMUSG00000046119	lincRNA	1110008E08Rik	ENSMUST00000060246	lincRNA		16	1	90554164	721
ENSMUSG00000083592	processed_pseudogene	Gm13614	ENSMUST00000117306	processed_pseudogene		2	1	69329739	503
ENSMUSG00000112244	processed_pseudogene	Gm48788	ENSMUST00000217720	processed_pseudogene		10	1	51568949	479
ENSMUSG00000104895	processed_pseudogene	Gm8454	ENSMUST00000196980	processed_pseudogene		5	-1	146017841	811
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000212569	protein_coding		8	1	123373873	1953
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000212498	processed_transcript		8	1	123381464	211
ENSMUSG00000035575	protein_coding	Utp6	ENSMUST00000131921	retained_intron		11	-1	79942264	648
ENSMUSG00000116830	lincRNA	Gm49714	ENSMUST00000231619	lincRNA		16	1	90596773	1895
ENSMUSG00000082065	unprocessed_pseudogene	Mup-ps14	ENSMUST00000118437	unprocessed_pseudogene		4	1	61608292	532
ENSMUSG00000104636	processed_pseudogene	Gm43239	ENSMUST00000200131	processed_pseudogene		5	-1	146027890	201
ENSMUSG00000035575	protein_coding	Utp6	ENSMUST00000146127	retained_intron		11	-1	79962367	559
ENSMUSG00000034371	protein_coding	Tkfc	ENSMUST00000237788	protein_coding		19	-1	10605432	2758
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000208722	nonsense_mediated_decay		7	1	130577484	3883
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000156388	processed_transcript		11	-1	112711340	878
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000125873	processed_transcript		11	-1	112691359	666
ENSMUSG00000034371	protein_coding	Tkfc	ENSMUST00000236950	protein_coding	principal1	19	-1	10605384	2437
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000154379	processed_transcript		11	-1	112710922	671
ENSMUSG00000115378	protein_coding	Gm39653	ENSMUST00000226288	protein_coding	principal1	1	1	63615968	1105
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000211964	processed_transcript		8	1	123384344	898
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000212741	processed_transcript		8	1	123388632	143
ENSMUSG00000022304	protein_coding	Dpys	ENSMUST00000022915	protein_coding	principal1	15	-1	39857467	2466
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000052462	protein_coding	alternative2	17	-1	24150924	1832
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000151650	processed_transcript		11	-1	112711362	878
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000212880	protein_coding		8	1	123397813	827
ENSMUSG00000034706	protein_coding	Dnaic2	ENSMUST00000151053	processed_transcript		11	1	114727408	1065
ENSMUSG00000026245	protein_coding	Farsb	ENSMUST00000170217	protein_coding	principal1	1	-1	78488859	2036
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000133231	processed_transcript		11	-1	112677220	867
ENSMUSG00000001472	protein_coding	Tcf25	ENSMUST00000212996	processed_transcript		8	1	123399330	183
ENSMUSG00000045318	protein_coding	Adra2c	ENSMUST00000049545	protein_coding	principal1	5	1	35278319	3445
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000147199	processed_transcript		17	-1	24093798	571
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000143550	processed_transcript		11	-1	112672210	438
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000142282	processed_transcript		11	-1	112672210	346
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000200686	retained_intron		5	1	150522630	937
ENSMUSG00000061981	protein_coding	Flot2	ENSMUST00000072289	protein_coding	alternative1	11	1	78037931	2621
ENSMUSG00000089820	antisense	Gm15775	ENSMUST00000159796	antisense		8	-1	124331795	538
ENSMUSG00000020641	protein_coding	Rsad2	ENSMUST00000020970	protein_coding	principal1	12	-1	26456452	3782
ENSMUSG00000022304	protein_coding	Dpys	ENSMUST00000110306	protein_coding	principal1	15	-1	39857470	2110
ENSMUSG00000026798	protein_coding	Coq4	ENSMUST00000028137	protein_coding	principal1	2	1	29788259	1991
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000140906	processed_transcript		17	-1	24150916	691
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000141399	processed_transcript		11	-1	112669398	316
ENSMUSG00000025496	protein_coding	Drd4	ENSMUST00000026569	protein_coding	principal1	7	1	141292006	2799
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000150578	retained_intron		17	-1	24141556	3652
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000124556	nonsense_mediated_decay		19	1	6341208	4256
ENSMUSG00000022304	protein_coding	Dpys	ENSMUST00000155859	protein_coding		15	-1	39793251	438
ENSMUSG00000089776	antisense	Gm15684	ENSMUST00000160605	antisense		8	-1	120045287	1814
ENSMUSG00000026245	protein_coding	Farsb	ENSMUST00000068333	protein_coding	principal1	1	-1	78488897	1951
ENSMUSG00000041674	processed_transcript	BC006965	ENSMUST00000148724	processed_transcript		11	-1	112744277	531
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000144533	protein_coding		17	-1	24140807	505
ENSMUSG00000025496	protein_coding	Drd4	ENSMUST00000209649	retained_intron		7	1	141293131	876
ENSMUSG00000034371	protein_coding	Tkfc	ENSMUST00000236121	nonsense_mediated_decay		19	-1	10605409	2437
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000202975	retained_intron		5	1	150522632	2534
ENSMUSG00000111172	lincRNA	Gm39302	ENSMUST00000215184	lincRNA		9	-1	21320617	636
ENSMUSG00000026798	protein_coding	Coq4	ENSMUST00000148791	protein_coding		2	1	29788271	613
ENSMUSG00000025318	protein_coding	Jph3	ENSMUST00000169735	processed_transcript		8	1	121729623	2092
ENSMUSG00000022304	protein_coding	Dpys	ENSMUST00000150196	processed_transcript		15	-1	39857470	1233
ENSMUSG00000020641	protein_coding	Rsad2	ENSMUST00000137792	nonsense_mediated_decay		12	-1	26456431	4189
ENSMUSG00000034371	protein_coding	Tkfc	ENSMUST00000236607	protein_coding	principal1	19	-1	10605654	2516
ENSMUSG00000115010	processed_pseudogene	Gm20150	ENSMUST00000227801	processed_pseudogene		15	-1	59672113	486
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000154982	protein_coding		17	-1	24120794	652
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000148410	retained_intron		19	1	6341216	647
ENSMUSG00000026798	protein_coding	Coq4	ENSMUST00000142694	retained_intron		2	1	29789977	205
ENSMUSG00000116591	lincRNA	Gm49715	ENSMUST00000231764	lincRNA		16	1	90668327	459
ENSMUSG00000106762	lincRNA	4930478P22Rik	ENSMUST00000201379	lincRNA		5	1	35361541	1384
ENSMUSG00000030155	protein_coding	Clec2e	ENSMUST00000032258	protein_coding	principal1	6	-1	129100913	2099
ENSMUSG00000114515	protein_coding	Aldoa	ENSMUST00000153686	nonsense_mediated_decay		7	-1	126809108	799
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000130382	protein_coding		19	1	6341224	1079
ENSMUSG00000034371	protein_coding	Tkfc	ENSMUST00000235285	nonsense_mediated_decay		19	-1	10605418	2094
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000164915	nonsense_mediated_decay		6	1	28480348	3688
ENSMUSG00000106762	lincRNA	4930478P22Rik	ENSMUST00000202026	lincRNA		5	1	35361553	2060
ENSMUSG00000024122	protein_coding	Pdpk1	ENSMUST00000128997	protein_coding		17	-1	24141128	328
ENSMUSG00000087695	antisense	Gm16291	ENSMUST00000147378	antisense		15	1	39797045	2594
ENSMUSG00000114515	protein_coding	Aldoa	ENSMUST00000207534	protein_coding	principal1	7	-1	126809108	741
ENSMUSG00000034371	protein_coding	Tkfc	ENSMUST00000236478	protein_coding		19	-1	10605308	957
ENSMUSG00000106762	lincRNA	4930478P22Rik	ENSMUST00000201921	lincRNA		5	1	35361559	723
ENSMUSG00000116582	lincRNA	Gm36169	ENSMUST00000232154	lincRNA		16	-1	90677000	1825
ENSMUSG00000117557	sense_intronic	Gm50070	ENSMUST00000234329	sense_intronic		17	-1	24147046	1212
ENSMUSG00000089991	unprocessed_pseudogene	Gm16332	ENSMUST00000134229	unprocessed_pseudogene		1	-1	139936477	2967
ENSMUSG00000020641	protein_coding	Rsad2	ENSMUST00000142732	processed_transcript		12	-1	26454842	430
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000142496	nonsense_mediated_decay		19	1	6341250	2413
ENSMUSG00000026798	protein_coding	Coq4	ENSMUST00000138233	retained_intron		2	1	29795565	1044
ENSMUSG00000075425	protein_coding	Gm13547	ENSMUST00000177379	processed_transcript		2	1	29759312	259
ENSMUSG00000111568	processed_pseudogene	Gm18488	ENSMUST00000215082	processed_pseudogene		9	1	11014450	364
ENSMUSG00000104496	processed_pseudogene	Gm5837	ENSMUST00000191844	processed_pseudogene		1	-1	139929608	1369
ENSMUSG00000034371	protein_coding	Tkfc	ENSMUST00000037678	protein_coding	principal1	19	-1	10604258	2253
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000123468	retained_intron		19	1	6341250	2875
ENSMUSG00000110951	lincRNA	Gm47001	ENSMUST00000216068	lincRNA		9	1	11102513	269
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000124333	retained_intron		19	1	6341270	775
ENSMUSG00000085867	unprocessed_pseudogene	Gm5834	ENSMUST00000126680	unprocessed_pseudogene		1	-1	139994205	1026
ENSMUSG00000105390	processed_pseudogene	Gm8458	ENSMUST00000196658	processed_pseudogene		5	1	146070906	819
ENSMUSG00000037390	protein_coding	Muc3	ENSMUST00000041226	protein_coding	principal1	5	-1	137149322	1853
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000207999	processed_transcript		7	1	130596318	604
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000127809	processed_transcript		19	1	6341418	552
ENSMUSG00000102905	processed_pseudogene	Gm38266	ENSMUST00000194931	processed_pseudogene		1	1	140000549	421
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000155569	processed_transcript		19	1	6341449	637
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000208882	processed_transcript		7	1	130645481	419
ENSMUSG00000103691	processed_pseudogene	Gm38019	ENSMUST00000195133	processed_pseudogene		1	-1	140049029	380
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000208106	processed_transcript		7	1	130645929	766
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000152259	retained_intron		19	1	6341779	2119
ENSMUSG00000026245	protein_coding	Farsb	ENSMUST00000189529	nonsense_mediated_decay		1	-1	78488862	1801
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000134307	retained_intron		19	1	6342537	223
ENSMUSG00000079113	protein_coding	Defa43	ENSMUST00000110749	protein_coding	principal1	8	-1	21594508	506
ENSMUSG00000037390	protein_coding	Muc3	ENSMUST00000160630	processed_transcript		5	-1	137139127	955
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000152912	retained_intron		19	1	6343516	613
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000207549	protein_coding	alternative2	7	1	130646230	3492
ENSMUSG00000041440	protein_coding	Gk5	ENSMUST00000085217	protein_coding	alternative2	9	1	96119362	2815
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000126841	retained_intron		19	1	6345350	611
ENSMUSG00000082323	processed_pseudogene	Gm15314	ENSMUST00000120740	processed_pseudogene		8	1	21598905	1887
ENSMUSG00000051716	protein_coding	Apon	ENSMUST00000060782	protein_coding	principal1	10	1	128254096	1397
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000236640	nonsense_mediated_decay		19	1	6346399	661
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000209108	protein_coding		7	1	130646243	3310
ENSMUSG00000026245	protein_coding	Farsb	ENSMUST00000188247	protein_coding		1	-1	78488859	970
ENSMUSG00000061981	protein_coding	Flot2	ENSMUST00000148162	nonsense_mediated_decay		11	1	78037931	2712
ENSMUSG00000038416	protein_coding	Cdc16	ENSMUST00000043962	protein_coding	principal1	8	1	13757676	2301
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000137095	retained_intron		19	1	6346549	1458
ENSMUSG00000045109	protein_coding	Krtap4-7	ENSMUST00000055121	protein_coding	principal1	11	-1	99644089	984
ENSMUSG00000051716	protein_coding	Apon	ENSMUST00000218722	protein_coding	principal1	10	1	128254150	1747
ENSMUSG00000022828	protein_coding	Gtf2e1	ENSMUST00000023525	protein_coding	principal1	16	-1	37539789	3084
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000154900	retained_intron		19	1	6346669	467
ENSMUSG00000026245	protein_coding	Farsb	ENSMUST00000189931	processed_transcript		1	-1	78488795	449
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000128170	nonsense_mediated_decay		19	1	6346692	1080
ENSMUSG00000093556	antisense	Gm20641	ENSMUST00000176069	antisense		14	1	38522049	615
ENSMUSG00000060070	protein_coding	Defa26	ENSMUST00000074343	protein_coding	principal1	8	1	21618183	372
ENSMUSG00000026245	protein_coding	Farsb	ENSMUST00000190441	protein_coding		1	-1	78488842	619
ENSMUSG00000075425	protein_coding	Gm13547	ENSMUST00000113810	protein_coding	principal1	2	1	29761528	629
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000208743	nonsense_mediated_decay		7	1	130692556	3878
ENSMUSG00000038416	protein_coding	Cdc16	ENSMUST00000134645	protein_coding		8	1	13757677	926
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000140098	retained_intron		19	1	6350909	518
ENSMUSG00000111691	lincRNA	Gm47002	ENSMUST00000213828	lincRNA		9	1	11148600	1082
ENSMUSG00000022828	protein_coding	Gtf2e1	ENSMUST00000130350	retained_intron		16	-1	37539776	3798
ENSMUSG00000061981	protein_coding	Flot2	ENSMUST00000073660	protein_coding	alternative1	11	1	78037984	2568
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000208661	retained_intron		7	1	130692603	2248
ENSMUSG00000110942	processed_pseudogene	Gm47029	ENSMUST00000217327	processed_pseudogene		9	-1	11238870	267
ENSMUSG00000026245	protein_coding	Farsb	ENSMUST00000191021	retained_intron		1	-1	78488837	656
ENSMUSG00000041440	protein_coding	Gk5	ENSMUST00000122383	protein_coding	principal2	9	1	96119375	4455
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000155655	nonsense_mediated_decay		19	1	6352620	2267
ENSMUSG00000110734	processed_pseudogene	Gm18934	ENSMUST00000216671	processed_pseudogene		9	-1	11278043	1044
ENSMUSG00000024948	protein_coding	Map4k2	ENSMUST00000142862	processed_transcript		19	1	6352775	259
ENSMUSG00000084366	unprocessed_pseudogene	Gm15313	ENSMUST00000119179	unprocessed_pseudogene		8	1	21639071	282
ENSMUSG00000038416	protein_coding	Cdc16	ENSMUST00000129872	retained_intron		8	1	13758767	811
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000207282	protein_coding	alternative2	7	1	130692765	3464
ENSMUSG00000099561	antisense	Gm28410	ENSMUST00000188113	antisense		1	-1	78340106	1450
ENSMUSG00000111458	processed_pseudogene	Gm47035	ENSMUST00000214277	processed_pseudogene		9	1	11541735	255
ENSMUSG00000110858	unprocessed_pseudogene	Gm18160	ENSMUST00000214279	unprocessed_pseudogene		9	1	11527579	827
ENSMUSG00000104018	TEC	4833412K13Rik	ENSMUST00000195509	TEC		1	-1	78466926	1479
ENSMUSG00000111503	lincRNA	Gm47034	ENSMUST00000214628	lincRNA		9	-1	11584845	681
ENSMUSG00000101798	unprocessed_pseudogene	Gm28995	ENSMUST00000186625	unprocessed_pseudogene		1	1	78433352	261
ENSMUSG00000075425	protein_coding	Gm13547	ENSMUST00000113809	protein_coding		2	1	29761561	369
ENSMUSG00000038416	protein_coding	Cdc16	ENSMUST00000137360	retained_intron		8	1	13779002	884
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000239258	protein_coding		7	1	130713677	2268
ENSMUSG00000078674	protein_coding	Mup18	ENSMUST00000098040	protein_coding	principal1	4	-1	61674136	930
ENSMUSG00000102945	TEC	Gm37884	ENSMUST00000191857	TEC		1	1	78375614	818
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000207395	protein_coding		7	1	130728750	2934
ENSMUSG00000115426	lincRNA	Gm19510	ENSMUST00000228865	lincRNA		15	-1	59794959	1861
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000207376	protein_coding		7	1	130729383	2557
ENSMUSG00000061981	protein_coding	Flot2	ENSMUST00000136353	processed_transcript		11	1	78040304	2558
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000207230	retained_intron		7	1	130756342	3668
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000059145	protein_coding	alternative2	7	1	130577484	3906
ENSMUSG00000041440	protein_coding	Gk5	ENSMUST00000129774	nonsense_mediated_decay		9	1	96119432	2506
ENSMUSG00000025318	protein_coding	Jph3	ENSMUST00000026357	protein_coding	principal1	8	1	121730563	3637
ENSMUSG00000047631	protein_coding	Apof	ENSMUST00000050901	protein_coding	alternative2	10	1	128268671	1258
ENSMUSG00000030852	protein_coding	Tacc2	ENSMUST00000033141	protein_coding	alternative2	7	1	130692556	3940
ENSMUSG00000061186	protein_coding	Sfmbt2	ENSMUST00000041105	protein_coding	alternative2	2	1	10372450	7874
ENSMUSG00000024497	protein_coding	Pou4f3	ENSMUST00000025374	protein_coding	principal1	18	1	42394539	2360
ENSMUSG00000073700	protein_coding	Klhl21	ENSMUST00000097773	protein_coding	principal1	4	1	152008803	3986
ENSMUSG00000041440	protein_coding	Gk5	ENSMUST00000136496	processed_transcript		9	1	96124220	632
ENSMUSG00000024497	protein_coding	Pou4f3	ENSMUST00000237247	protein_coding		18	1	42395075	2175
ENSMUSG00000025318	protein_coding	Jph3	ENSMUST00000167439	nonsense_mediated_decay		8	1	121730567	2852
ENSMUSG00000061186	protein_coding	Sfmbt2	ENSMUST00000116594	protein_coding	principal3	2	1	10372436	7821
ENSMUSG00000041440	protein_coding	Gk5	ENSMUST00000189249	retained_intron		9	1	96170916	2550
ENSMUSG00000108391	TEC	Gm9768	ENSMUST00000206007	TEC		4	-1	152009619	2861
ENSMUSG00000109358	TEC	Gm44716	ENSMUST00000209007	TEC		8	-1	11291267	710
ENSMUSG00000047631	protein_coding	Apof	ENSMUST00000238970	protein_coding	principal2	10	1	128267997	1930
ENSMUSG00000025318	protein_coding	Jph3	ENSMUST00000172209	retained_intron		8	1	121753476	679
ENSMUSG00000082676	processed_pseudogene	Gm11843	ENSMUST00000118984	processed_pseudogene		4	-1	12131975	425
ENSMUSG00000022261	protein_coding	Sdc2	ENSMUST00000022871	protein_coding	principal1	15	1	32920723	3527
ENSMUSG00000051041	protein_coding	Olfml1	ENSMUST00000120990	protein_coding	principal1	7	1	107567446	1685
ENSMUSG00000115734	processed_pseudogene	Gm7708	ENSMUST00000227398	processed_pseudogene		15	-1	59930290	673
ENSMUSG00000078130	protein_coding	Gm11555	ENSMUST00000104929	protein_coding	principal1	11	-1	99650236	638
ENSMUSG00000051041	protein_coding	Olfml1	ENSMUST00000239087	protein_coding		7	1	107567766	699
ENSMUSG00000061981	protein_coding	Flot2	ENSMUST00000100784	protein_coding	principal3	11	1	78037941	2699
ENSMUSG00000078130	protein_coding	Gm11555	ENSMUST00000073126	protein_coding		11	-1	99650181	492
ENSMUSG00000093849	processed_pseudogene	Gm7083	ENSMUST00000178617	processed_pseudogene		15	1	59977722	450
ENSMUSG00000109374	lincRNA	Gm44773	ENSMUST00000207374	lincRNA		7	1	107592950	557
ENSMUSG00000111111	TEC	Gm47037	ENSMUST00000217391	TEC		9	-1	11978249	2597
ENSMUSG00000082052	processed_pseudogene	Ywhaq-ps2	ENSMUST00000117738	processed_pseudogene		5	-1	114829215	643
ENSMUSG00000111810	processed_pseudogene	Gm29785	ENSMUST00000217033	processed_pseudogene		9	1	12233994	383
ENSMUSG00000034687	protein_coding	Fras1	ENSMUST00000036019	protein_coding	principal1	5	1	96373955	15848
ENSMUSG00000069718	protein_coding	Gm11563	ENSMUST00000092695	protein_coding	principal1	11	-1	99658960	1012
ENSMUSG00000107256	TEC	Gm13821	ENSMUST00000202029	TEC		5	-1	114842075	3201
ENSMUSG00000058966	protein_coding	Fam57b	ENSMUST00000205324	protein_coding	alternative2	7	1	126797668	1915
ENSMUSG00000092329	protein_coding	Galnt2l	ENSMUST00000127664	protein_coding	principal1	8	1	119910841	3953
ENSMUSG00000081974	transcribed_processed_pseudogene	Gm11960	ENSMUST00000181063	processed_transcript		11	1	4561780	2858
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000202003	protein_coding		5	1	150522632	3473
ENSMUSG00000097702	lincRNA	Gm26739	ENSMUST00000181041	lincRNA		8	1	120598552	427
ENSMUSG00000058966	protein_coding	Fam57b	ENSMUST00000205888	processed_transcript		7	1	126812683	1029
ENSMUSG00000034687	protein_coding	Fras1	ENSMUST00000199841	retained_intron		5	1	96374206	1273
ENSMUSG00000081974	transcribed_processed_pseudogene	Gm11960	ENSMUST00000122068	transcribed_processed_pseudogene		11	1	4563632	925
ENSMUSG00000079174	lincRNA	Gm3054	ENSMUST00000111075	lincRNA		5	-1	137166070	265
ENSMUSG00000058966	protein_coding	Fam57b	ENSMUST00000206558	processed_transcript		7	1	126814036	375
ENSMUSG00000034687	protein_coding	Fras1	ENSMUST00000196751	retained_intron		5	1	96374435	2017
ENSMUSG00000058966	protein_coding	Fam57b	ENSMUST00000205722	protein_coding		7	1	126816884	399
ENSMUSG00000106466	lincRNA	Gm40348	ENSMUST00000199648	lincRNA		5	1	137166450	452
ENSMUSG00000024193	protein_coding	Phf1	ENSMUST00000073724	protein_coding	principal2	17	1	26933052	2522
ENSMUSG00000101133	antisense	Gm29050	ENSMUST00000190865	antisense		17	1	5388763	502
ENSMUSG00000034354	protein_coding	Mtmr3	ENSMUST00000155566	processed_transcript		11	-1	4488366	4642
ENSMUSG00000101133	antisense	Gm29050	ENSMUST00000190732	antisense		17	1	5404121	2528
ENSMUSG00000118522	protein_coding	CAAA01077340.1	ENSMUST00000239135	protein_coding	principal1	5	-1	137177043	1364
ENSMUSG00000100382	processed_pseudogene	Gm28924	ENSMUST00000190012	processed_pseudogene		9	-1	96270101	241
ENSMUSG00000082020	unprocessed_pseudogene	Gm14182	ENSMUST00000119334	unprocessed_pseudogene		11	-1	99663102	210
ENSMUSG00000103611	TEC	Gm37195	ENSMUST00000192006	TEC		9	1	96219130	3018
ENSMUSG00000034687	protein_coding	Fras1	ENSMUST00000197126	processed_transcript		5	1	96617364	427
ENSMUSG00000034687	protein_coding	Fras1	ENSMUST00000199204	processed_transcript		5	1	96617581	553
ENSMUSG00000058966	protein_coding	Fam57b	ENSMUST00000079423	protein_coding	principal5	7	1	126823303	2328
ENSMUSG00000034687	protein_coding	Fras1	ENSMUST00000198016	processed_transcript		5	1	96630119	245
ENSMUSG00000075566	protein_coding	Krtap4-6	ENSMUST00000100476	protein_coding	principal1	11	-1	99665960	918
ENSMUSG00000001444	protein_coding	Tbx21	ENSMUST00000001484	protein_coding	principal1	11	-1	97115331	2488
ENSMUSG00000041014	protein_coding	Nrg3	ENSMUST00000166968	protein_coding	principal3	14	-1	39473088	4011
ENSMUSG00000020386	protein_coding	Sar1b	ENSMUST00000020653	protein_coding	principal1	11	1	51763687	1201
ENSMUSG00000058966	protein_coding	Fam57b	ENSMUST00000207020	protein_coding		7	1	126824653	1777
ENSMUSG00000022974	protein_coding	Paxbp1	ENSMUST00000118522	protein_coding	principal1	16	-1	91044543	3973
ENSMUSG00000113335	TEC	Gm48296	ENSMUST00000220866	TEC		12	1	100187011	695
ENSMUSG00000084368	processed_pseudogene	Gm11572	ENSMUST00000119164	processed_pseudogene		11	-1	97116915	120
ENSMUSG00000115140	lincRNA	Gm32764	ENSMUST00000226596	lincRNA		15	-1	33066225	1228
ENSMUSG00000020159	protein_coding	Gabrp	ENSMUST00000020366	protein_coding	principal1	11	-1	33578957	3280
ENSMUSG00000061292	protein_coding	Cyp3a59	ENSMUST00000199212	nonsense_mediated_decay		5	1	146079257	1913
ENSMUSG00000058966	protein_coding	Fam57b	ENSMUST00000098032	protein_coding	alternative2	7	1	126816885	1894
ENSMUSG00000041014	protein_coding	Nrg3	ENSMUST00000168810	protein_coding	alternative2	14	-1	39472825	2175
ENSMUSG00000020386	protein_coding	Sar1b	ENSMUST00000136363	processed_transcript		11	1	51763694	377
ENSMUSG00000115140	lincRNA	Gm32764	ENSMUST00000226619	lincRNA		15	-1	33073523	430
ENSMUSG00000041014	protein_coding	Nrg3	ENSMUST00000173780	protein_coding	alternative2	14	-1	39472827	2137
ENSMUSG00000041014	protein_coding	Nrg3	ENSMUST00000176122	retained_intron		14	-1	39472666	3607
ENSMUSG00000020159	protein_coding	Gabrp	ENSMUST00000135350	protein_coding		11	-1	33578959	467
ENSMUSG00000030934	protein_coding	Oat	ENSMUST00000084500	protein_coding	principal1	7	-1	132576398	2152
ENSMUSG00000034706	protein_coding	Dnaic2	ENSMUST00000069325	protein_coding	principal1	11	1	114727412	2874
ENSMUSG00000093383	antisense	Gm20642	ENSMUST00000177185	antisense		14	1	39220071	1512
ENSMUSG00000036083	protein_coding	Slc17a3	ENSMUST00000091698	protein_coding		13	1	23839449	1759
ENSMUSG00000030934	protein_coding	Oat	ENSMUST00000211545	protein_coding		7	-1	132575718	335
ENSMUSG00000093528	antisense	Nrg3os	ENSMUST00000177141	antisense		14	1	38898302	927
ENSMUSG00000109842	lincRNA	Gm45502	ENSMUST00000209561	lincRNA		7	1	132911089	252
ENSMUSG00000052212	protein_coding	Cd177	ENSMUST00000063956	protein_coding	principal1	7	-1	24760311	2714
ENSMUSG00000109225	TEC	4930513N20Rik	ENSMUST00000207466	TEC		7	-1	130654392	1265
ENSMUSG00000033365	protein_coding	Ipo13	ENSMUST00000134752	processed_transcript		4	-1	117900662	557
ENSMUSG00000061292	protein_coding	Cyp3a59	ENSMUST00000035571	protein_coding	principal1	5	1	146079267	1990
ENSMUSG00000034706	protein_coding	Dnaic2	ENSMUST00000136403	processed_transcript		11	1	114727416	1579
ENSMUSG00000034706	protein_coding	Dnaic2	ENSMUST00000092469	protein_coding	principal1	11	1	114729148	2799
ENSMUSG00000034706	protein_coding	Dnaic2	ENSMUST00000141762	protein_coding		11	1	114732895	1704
ENSMUSG00000111552	processed_pseudogene	Gm7570	ENSMUST00000215246	processed_pseudogene		9	1	12819525	698
ENSMUSG00000052212	protein_coding	Cd177	ENSMUST00000206160	retained_intron		7	-1	24750821	641
ENSMUSG00000024193	protein_coding	Phf1	ENSMUST00000237750	retained_intron		17	1	26933131	3005
ENSMUSG00000060208	protein_coding	Defa17	ENSMUST00000079528	protein_coding	principal1	8	1	21655780	397
ENSMUSG00000024193	protein_coding	Phf1	ENSMUST00000237189	protein_coding	alternative2	17	1	26933149	2526
ENSMUSG00000034706	protein_coding	Dnaic2	ENSMUST00000144872	processed_transcript		11	1	114737041	2247
ENSMUSG00000071750	processed_pseudogene	Gm7713	ENSMUST00000181201	processed_pseudogene		15	-1	59994892	1007
ENSMUSG00000034706	protein_coding	Dnaic2	ENSMUST00000130692	processed_transcript		11	1	114752676	597
ENSMUSG00000098228	processed_pseudogene	Gm21070	ENSMUST00000182425	processed_pseudogene		9	1	12865433	985
ENSMUSG00000056849	processed_pseudogene	Gm16415	ENSMUST00000080097	processed_pseudogene		18	1	42441019	489
ENSMUSG00000101049	processed_pseudogene	Gm8856	ENSMUST00000185254	processed_pseudogene		1	1	144952928	1144
ENSMUSG00000004945	protein_coding	Tmem242	ENSMUST00000005053	protein_coding	principal1	17	-1	5440243	948
ENSMUSG00000071749	protein_coding	4933412E24Rik	ENSMUST00000096421	protein_coding	principal1	15	-1	60016613	1748
ENSMUSG00000099617	processed_pseudogene	Gm6550	ENSMUST00000187574	processed_pseudogene		1	-1	145165943	993
ENSMUSG00000024193	protein_coding	Phf1	ENSMUST00000236931	retained_intron		17	1	26933150	3142
ENSMUSG00000035355	protein_coding	Kcnh4	ENSMUST00000107361	protein_coding	principal1	11	-1	100759740	3748
ENSMUSG00000004945	protein_coding	Tmem242	ENSMUST00000188282	protein_coding		17	-1	5440259	822
ENSMUSG00000097130	processed_pseudogene	Gm5262	ENSMUST00000180655	processed_pseudogene		1	1	145183894	996
ENSMUSG00000103650	processed_pseudogene	Gm37207	ENSMUST00000194284	processed_pseudogene		3	-1	86933663	296
ENSMUSG00000085936	processed_transcript	2610307P16Rik	ENSMUST00000134787	processed_transcript		13	-1	28521108	1275
ENSMUSG00000019909	protein_coding	Fam162b	ENSMUST00000020064	protein_coding	principal1	10	-1	51590517	646
ENSMUSG00000101661	processed_pseudogene	Gm28392	ENSMUST00000077630	processed_pseudogene		1	-1	145315548	393
ENSMUSG00000063206	protein_coding	Defa34	ENSMUST00000075268	protein_coding	principal1	8	1	21665797	375
ENSMUSG00000085936	processed_transcript	2610307P16Rik	ENSMUST00000122881	processed_transcript		13	-1	28480841	361
ENSMUSG00000024193	protein_coding	Phf1	ENSMUST00000236269	nonsense_mediated_decay		17	1	26933337	790
ENSMUSG00000004945	protein_coding	Tmem242	ENSMUST00000185896	protein_coding		17	-1	5440256	780
ENSMUSG00000035355	protein_coding	Kcnh4	ENSMUST00000107363	protein_coding	principal1	11	-1	100759942	3948
ENSMUSG00000103055	TEC	Gm38269	ENSMUST00000194549	TEC		1	-1	145326691	3298
ENSMUSG00000118058	processed_pseudogene	Gm3631	ENSMUST00000237473	processed_pseudogene		18	1	42487088	665
ENSMUSG00000101959	protein_coding	Ldhal6b	ENSMUST00000189788	protein_coding	principal1	17	-1	5418767	1445
ENSMUSG00000028894	protein_coding	Inpp5b	ENSMUST00000094782	protein_coding	principal1	4	1	124741850	3809
ENSMUSG00000024193	protein_coding	Phf1	ENSMUST00000236613	retained_intron		17	1	26933443	1972
ENSMUSG00000082859	unprocessed_pseudogene	Defa-ps9	ENSMUST00000118264	unprocessed_pseudogene		8	1	21688648	276
ENSMUSG00000024193	protein_coding	Phf1	ENSMUST00000237412	protein_coding	alternative2	17	1	26933460	2094
ENSMUSG00000028894	protein_coding	Inpp5b	ENSMUST00000153837	protein_coding		4	1	124741858	710
ENSMUSG00000055944	lincRNA	E130018O15Rik	ENSMUST00000069741	lincRNA		5	-1	35388476	3776
ENSMUSG00000092539	lincRNA	Gm20468	ENSMUST00000236945	lincRNA		17	1	26861421	1726
ENSMUSG00000028894	protein_coding	Inpp5b	ENSMUST00000184454	nonsense_mediated_decay		4	1	124741872	3834
ENSMUSG00000022974	protein_coding	Paxbp1	ENSMUST00000023698	nonsense_mediated_decay		16	-1	91044164	2732
ENSMUSG00000092539	lincRNA	Gm20468	ENSMUST00000172664	lincRNA		17	1	26861421	1119
ENSMUSG00000083304	unprocessed_pseudogene	Mup-ps15	ENSMUST00000121741	unprocessed_pseudogene		4	1	61698841	539
ENSMUSG00000118147	sense_overlapping	Gm41555	ENSMUST00000237264	sense_overlapping		17	-1	26934563	1130
ENSMUSG00000095307	processed_pseudogene	Gm12573	ENSMUST00000118158	processed_pseudogene		4	1	61750075	286
ENSMUSG00000078838	lincRNA	Gm17382	ENSMUST00000236777	lincRNA		17	-1	26886202	1600
ENSMUSG00000073052	lincRNA	D130052B06Rik	ENSMUST00000101371	lincRNA		11	1	33599302	2295
ENSMUSG00000022974	protein_coding	Paxbp1	ENSMUST00000150397	processed_transcript		16	-1	91019231	296
ENSMUSG00000028894	protein_coding	Inpp5b	ENSMUST00000154229	protein_coding		4	1	124741878	790
ENSMUSG00000085936	processed_transcript	2610307P16Rik	ENSMUST00000148885	processed_transcript		13	-1	28885620	1870
ENSMUSG00000073052	lincRNA	D130052B06Rik	ENSMUST00000238565	lincRNA		11	1	33607980	2531
ENSMUSG00000078838	lincRNA	Gm17382	ENSMUST00000108741	lincRNA		17	-1	26886175	1514
ENSMUSG00000022974	protein_coding	Paxbp1	ENSMUST00000146281	retained_intron		16	-1	91030816	1298
ENSMUSG00000022974	protein_coding	Paxbp1	ENSMUST00000145136	nonsense_mediated_decay		16	-1	91030514	339
ENSMUSG00000085936	processed_transcript	2610307P16Rik	ENSMUST00000154298	processed_transcript		13	-1	28516781	433
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000115126	protein_coding	alternative1	16	1	32644506	4540
ENSMUSG00000022974	protein_coding	Paxbp1	ENSMUST00000128922	retained_intron		16	-1	91027638	546
ENSMUSG00000085936	processed_transcript	2610307P16Rik	ENSMUST00000155292	processed_transcript		13	-1	28516940	391
ENSMUSG00000067438	protein_coding	Hmx1	ENSMUST00000172923	protein_coding		5	1	35389108	435
ENSMUSG00000085936	processed_transcript	2610307P16Rik	ENSMUST00000125358	processed_transcript		13	-1	28883456	824
ENSMUSG00000028894	protein_coding	Inpp5b	ENSMUST00000145359	processed_transcript		4	1	124769222	634
ENSMUSG00000085936	processed_transcript	2610307P16Rik	ENSMUST00000134624	processed_transcript		13	-1	28885344	567
ENSMUSG00000022974	protein_coding	Paxbp1	ENSMUST00000124653	retained_intron		16	-1	91034892	903
ENSMUSG00000090323	processed_pseudogene	Gm5263	ENSMUST00000163646	processed_pseudogene		1	1	146420436	601
ENSMUSG00000028894	protein_coding	Inpp5b	ENSMUST00000142652	processed_transcript		4	1	124769328	471
ENSMUSG00000082861	processed_pseudogene	Gm11362	ENSMUST00000118838	processed_pseudogene		13	1	28836875	850
ENSMUSG00000022974	protein_coding	Paxbp1	ENSMUST00000127002	processed_transcript		16	-1	91044354	1415
ENSMUSG00000028894	protein_coding	Inpp5b	ENSMUST00000135971	processed_transcript		4	1	124795285	255
ENSMUSG00000086785	processed_pseudogene	Gm6081	ENSMUST00000134472	processed_pseudogene		13	-1	28511232	489
ENSMUSG00000036083	protein_coding	Slc17a3	ENSMUST00000110422	protein_coding	alternative2	13	1	23839463	1764
ENSMUSG00000028894	protein_coding	Inpp5b	ENSMUST00000142446	processed_transcript		4	1	124799548	737
ENSMUSG00000087627	processed_transcript	A230059L01Rik	ENSMUST00000126596	antisense		1	-1	146806022	2813
ENSMUSG00000085279	antisense	Gm15965	ENSMUST00000123318	antisense		16	1	90983907	1428
ENSMUSG00000067438	protein_coding	Hmx1	ENSMUST00000087674	protein_coding	principal1	5	1	35389117	1526
ENSMUSG00000087627	processed_transcript	A230059L01Rik	ENSMUST00000191937	TEC		1	-1	146807340	2740
ENSMUSG00000022978	protein_coding	Mis18a	ENSMUST00000099554	protein_coding	principal1	16	-1	90727404	1333
ENSMUSG00000085120	lincRNA	Gm16086	ENSMUST00000143652	lincRNA		12	-1	107099673	371
ENSMUSG00000100218	processed_pseudogene	Gm8296	ENSMUST00000185597	processed_pseudogene		1	-1	45514055	524
ENSMUSG00000087354	processed_transcript	4930404I05Rik	ENSMUST00000154854	processed_transcript		16	1	91011249	978
ENSMUSG00000036083	protein_coding	Slc17a3	ENSMUST00000166467	protein_coding	principal3	13	1	23839463	4336
ENSMUSG00000103608	TEC	4930442P19Rik	ENSMUST00000193163	TEC		5	-1	35391912	1240
ENSMUSG00000087354	processed_transcript	4930404I05Rik	ENSMUST00000125902	antisense		16	1	91013721	2675
ENSMUSG00000106970	TEC	Gm43377	ENSMUST00000201640	TEC		5	1	35396098	455
ENSMUSG00000022978	protein_coding	Mis18a	ENSMUST00000129171	retained_intron		16	-1	90727404	2674
ENSMUSG00000036083	protein_coding	Slc17a3	ENSMUST00000225076	retained_intron		13	1	23839590	3146
ENSMUSG00000022978	protein_coding	Mis18a	ENSMUST00000147546	retained_intron		16	-1	90727139	493
ENSMUSG00000036083	protein_coding	Slc17a3	ENSMUST00000039721	protein_coding	principal3	13	1	23839434	4276
ENSMUSG00000104752	protein_coding	Gm5565	ENSMUST00000199463	protein_coding	principal1	5	-1	146160539	1162
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000202313	protein_coding	principal1	5	1	150522644	10517
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000001460	protein_coding	principal1	6	1	28480348	3482
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000167201	protein_coding		6	1	28480359	3781
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000202192	processed_transcript		5	1	150522690	588
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000183161	retained_intron		6	1	28480429	2420
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000201149	processed_transcript		5	1	150529106	634
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000171532	processed_transcript		6	1	28561817	420
ENSMUSG00000027048	protein_coding	Abcb11	ENSMUST00000102710	protein_coding	principal2	2	-1	69342614	4893
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000163772	processed_transcript		6	1	28704909	110
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000201678	retained_intron		5	1	150552366	646
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000169321	processed_transcript		6	1	28705720	320
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000235951	retained_intron		17	-1	26939448	2748
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000202837	retained_intron		5	1	150553876	669
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000171195	processed_transcript		6	1	28764690	337
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000202693	retained_intron		5	1	150556479	688
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000169579	processed_transcript		6	1	28776548	392
ENSMUSG00000041750	polymorphic_pseudogene	Cd1d2	ENSMUST00000194208	polymorphic_pseudogene		3	1	86986551	1527
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000166136	processed_transcript		6	1	28848907	366
ENSMUSG00000027048	protein_coding	Abcb11	ENSMUST00000102709	protein_coding	principal2	2	-1	69342600	5025
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000202727	retained_intron		5	1	150556966	479
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000115124	protein_coding		16	1	32644581	4516
ENSMUSG00000001424	protein_coding	Snd1	ENSMUST00000165151	retained_intron		6	1	28880043	718
ENSMUSG00000038517	protein_coding	Tbkbp1	ENSMUST00000107615	protein_coding	principal2	11	-1	97149712	3333
ENSMUSG00000027048	protein_coding	Abcb11	ENSMUST00000133663	processed_transcript		2	-1	69239078	648
ENSMUSG00000041750	polymorphic_pseudogene	Cd1d2	ENSMUST00000192481	polymorphic_pseudogene		3	1	86986586	1131
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000201309	processed_transcript		5	1	150566541	1340
ENSMUSG00000049939	protein_coding	Lrrc4	ENSMUST00000171353	protein_coding		6	-1	28830345	883
ENSMUSG00000030402	protein_coding	Ppm1n	ENSMUST00000032560	protein_coding	principal1	7	-1	19280064	1648
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000115125	protein_coding		16	1	32644643	4313
ENSMUSG00000027048	protein_coding	Abcb11	ENSMUST00000180142	protein_coding	alternative2	2	-1	69342616	4963
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000201226	retained_intron		5	1	150566822	864
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000201165	retained_intron		5	1	150568588	1742
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000115123	protein_coding	alternative1	16	1	32644826	4226
ENSMUSG00000030402	protein_coding	Ppm1n	ENSMUST00000205498	retained_intron		7	-1	19278401	820
ENSMUSG00000049939	protein_coding	Lrrc4	ENSMUST00000062304	protein_coding	principal1	6	-1	28831747	3615
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000161005	lincRNA		1	1	161034607	430
ENSMUSG00000030402	protein_coding	Ppm1n	ENSMUST00000205792	retained_intron		7	-1	19278155	261
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000236744	retained_intron		17	-1	26939158	740
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000164358	processed_transcript		16	1	32644959	224
ENSMUSG00000041147	protein_coding	Brca2	ENSMUST00000044620	protein_coding	principal1	5	1	150522630	10724
ENSMUSG00000030402	protein_coding	Ppm1n	ENSMUST00000206782	retained_intron		7	-1	19279601	785
ENSMUSG00000103899	TEC	Gm37940	ENSMUST00000194243	TEC		6	1	28796463	3251
ENSMUSG00000086819	antisense	Gm13613	ENSMUST00000126240	antisense		2	1	69248307	1444
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000150383	protein_coding		16	1	32657023	408
ENSMUSG00000107178	sense_intronic	Gm42531	ENSMUST00000201648	sense_intronic		5	1	150562311	4048
ENSMUSG00000038517	protein_coding	Tbkbp1	ENSMUST00000118375	protein_coding	principal2	11	-1	97150046	3288
ENSMUSG00000041750	polymorphic_pseudogene	Cd1d2	ENSMUST00000041920	protein_coding	principal1	3	1	86986586	1243
ENSMUSG00000106764	antisense	Gm42529	ENSMUST00000201843	antisense		5	-1	150566426	741
ENSMUSG00000038517	protein_coding	Tbkbp1	ENSMUST00000107614	protein_coding	alternative2	11	-1	97151036	2391
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000235442	retained_intron		17	-1	26939521	1130
ENSMUSG00000006362	protein_coding	Cbfa2t3	ENSMUST00000127984	protein_coding	principal3	8	-1	122699109	7645
ENSMUSG00000096798	protein_coding	Gm6309	ENSMUST00000174320	protein_coding	principal1	5	-1	146170721	1154
ENSMUSG00000038517	protein_coding	Tbkbp1	ENSMUST00000107613	nonsense_mediated_decay		11	-1	97150048	2173
ENSMUSG00000038517	protein_coding	Tbkbp1	ENSMUST00000146374	protein_coding		11	-1	97151495	604
ENSMUSG00000059303	protein_coding	Olfr836	ENSMUST00000212730	protein_coding	alternative2	9	1	19120382	5045
ENSMUSG00000033365	protein_coding	Ipo13	ENSMUST00000036156	protein_coding	principal1	4	-1	117914999	3595
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000238891	protein_coding		16	1	32658925	4049
ENSMUSG00000059303	protein_coding	Olfr836	ENSMUST00000215981	protein_coding	alternative2	9	1	19120595	5046
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000238806	protein_coding	alternative1	16	1	32661234	4189
ENSMUSG00000111830	lincRNA	4930568E12Rik	ENSMUST00000215337	lincRNA		9	-1	13105858	552
ENSMUSG00000038517	protein_coding	Tbkbp1	ENSMUST00000066078	protein_coding	alternative2	11	-1	97149712	3338
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000238856	protein_coding	principal5	16	1	32661252	4267
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000156614	protein_coding		16	1	32663761	871
ENSMUSG00000033365	protein_coding	Ipo13	ENSMUST00000155524	processed_transcript		4	-1	117895114	402
ENSMUSG00000059303	protein_coding	Olfr836	ENSMUST00000074986	protein_coding	principal2	9	1	19120957	955
ENSMUSG00000111830	lincRNA	4930568E12Rik	ENSMUST00000216694	lincRNA		9	-1	13105855	781
ENSMUSG00000033365	protein_coding	Ipo13	ENSMUST00000140661	processed_transcript		4	-1	117895873	494
ENSMUSG00000115681	lincRNA	Gm2682	ENSMUST00000227875	lincRNA		15	-1	60187111	284
ENSMUSG00000033365	protein_coding	Ipo13	ENSMUST00000136670	processed_transcript		4	-1	117895892	469
ENSMUSG00000071065	protein_coding	Olfr806	ENSMUST00000213239	protein_coding	principal1	10	-1	129741921	3724
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000137044	nonsense_mediated_decay		16	1	32668236	1075
ENSMUSG00000071065	protein_coding	Olfr806	ENSMUST00000215142	protein_coding	principal1	10	-1	129741902	3108
ENSMUSG00000115681	lincRNA	Gm2682	ENSMUST00000226854	lincRNA		15	-1	60187408	374
ENSMUSG00000115681	lincRNA	Gm2682	ENSMUST00000227412	lincRNA		15	-1	60187408	1524
ENSMUSG00000033365	protein_coding	Ipo13	ENSMUST00000153918	processed_transcript		4	-1	117903867	638
ENSMUSG00000071065	protein_coding	Olfr806	ENSMUST00000095245	protein_coding	principal1	10	-1	129738915	942
ENSMUSG00000115681	lincRNA	Gm2682	ENSMUST00000226736	lincRNA		15	-1	60164457	739
ENSMUSG00000030617	protein_coding	Ccdc83	ENSMUST00000107221	protein_coding	alternative2	7	-1	90265418	1390
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000002603	protein_coding	principal3	15	-1	76069754	5599
ENSMUSG00000006362	protein_coding	Cbfa2t3	ENSMUST00000006525	protein_coding	alternative2	8	-1	122678072	3161
ENSMUSG00000035131	protein_coding	Brinp3	ENSMUST00000074622	protein_coding	principal1	1	1	146494760	4023
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000063747	protein_coding	alternative2	15	-1	76069754	5440
ENSMUSG00000072884	processed_transcript	Gm10433	ENSMUST00000146364	lincRNA		12	1	100187968	1984
ENSMUSG00000072884	processed_transcript	Gm10433	ENSMUST00000138678	processed_transcript		12	1	100188773	841
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000109946	protein_coding	alternative2	15	-1	76069784	5545
ENSMUSG00000022538	protein_coding	Lsg1	ENSMUST00000117363	protein_coding	principal1	16	-1	30587592	3180
ENSMUSG00000039826	protein_coding	Trub2	ENSMUST00000113807	protein_coding		2	-1	29787648	1035
ENSMUSG00000035131	protein_coding	Brinp3	ENSMUST00000132847	protein_coding		1	1	146497614	927
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000229940	retained_intron		15	-1	76047820	439
ENSMUSG00000006362	protein_coding	Cbfa2t3	ENSMUST00000064674	protein_coding	alternative2	8	-1	122678175	2867
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000231218	processed_transcript		15	-1	76049017	819
ENSMUSG00000035131	protein_coding	Brinp3	ENSMUST00000128345	nonsense_mediated_decay		1	1	146497704	2803
ENSMUSG00000006362	protein_coding	Cbfa2t3	ENSMUST00000134045	protein_coding		8	-1	122678694	639
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000229896	retained_intron		15	-1	76048637	835
ENSMUSG00000042502	protein_coding	Cd2bp2	ENSMUST00000166791	protein_coding	principal1	7	-1	127196000	3284
ENSMUSG00000030617	protein_coding	Ccdc83	ENSMUST00000107220	protein_coding	alternative2	7	-1	90265432	1408
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000230217	retained_intron		15	-1	76049232	876
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000238799	nonsense_mediated_decay		16	1	32669393	711
ENSMUSG00000109434	TEC	Gm44937	ENSMUST00000207705	TEC		7	1	58720199	2691
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000202254	retained_intron		5	-1	31180132	4718
ENSMUSG00000035131	protein_coding	Brinp3	ENSMUST00000125331	retained_intron		1	1	146497738	3075
ENSMUSG00000006362	protein_coding	Cbfa2t3	ENSMUST00000142535	processed_transcript		8	-1	122646466	408
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000230249	retained_intron		15	-1	76049291	586
ENSMUSG00000006362	protein_coding	Cbfa2t3	ENSMUST00000147374	processed_transcript		8	-1	122678111	542
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000230104	processed_transcript		15	-1	76050632	454
ENSMUSG00000025324	protein_coding	Atp10a	ENSMUST00000207668	protein_coding		7	1	58656166	688
ENSMUSG00000030617	protein_coding	Ccdc83	ENSMUST00000040413	protein_coding	principal3	7	-1	90265432	1546
ENSMUSG00000095040	protein_coding	1700001J03Rik	ENSMUST00000073721	protein_coding	principal1	5	-1	146185304	787
ENSMUSG00000035131	protein_coding	Brinp3	ENSMUST00000166814	protein_coding	principal1	1	1	146497687	2760
ENSMUSG00000006362	protein_coding	Cbfa2t3	ENSMUST00000148630	retained_intron		8	-1	122698902	537
ENSMUSG00000080078	processed_pseudogene	Gm15583	ENSMUST00000116191	processed_pseudogene		1	1	146725581	3510
ENSMUSG00000030617	protein_coding	Ccdc83	ENSMUST00000207819	retained_intron		7	-1	90265777	607
ENSMUSG00000095040	protein_coding	1700001J03Rik	ENSMUST00000188052	retained_intron		5	-1	146184295	490
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000145830	protein_coding		15	-1	76050786	423
ENSMUSG00000102403	TEC	Gm38187	ENSMUST00000195609	TEC		1	-1	146482355	4709
ENSMUSG00000111285	lincRNA	Gm47051	ENSMUST00000214246	lincRNA		9	1	13106013	1020
ENSMUSG00000022568	protein_coding	Scrib	ENSMUST00000148211	protein_coding		15	-1	76050786	353
ENSMUSG00000042502	protein_coding	Cd2bp2	ENSMUST00000206026	protein_coding	principal1	7	-1	127195938	2906
ENSMUSG00000085822	antisense	Gm15584	ENSMUST00000123231	antisense		1	-1	146841696	759
ENSMUSG00000106547	lincRNA	B230303O12Rik	ENSMUST00000199119	lincRNA		5	-1	146194809	3645
ENSMUSG00000021904	protein_coding	Sema3g	ENSMUST00000090180	protein_coding	principal1	14	1	31217860	4540
ENSMUSG00000105542	processed_pseudogene	Gm34248	ENSMUST00000200027	processed_pseudogene		5	-1	146200458	474
ENSMUSG00000042502	protein_coding	Cd2bp2	ENSMUST00000205525	retained_intron		7	-1	127195949	3072
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000115122	protein_coding		16	1	32673154	227
ENSMUSG00000070639	protein_coding	Lrrc8b	ENSMUST00000112707	protein_coding	principal1	5	1	105415775	6726
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000115120	protein_coding		16	1	32673154	2796
ENSMUSG00000042502	protein_coding	Cd2bp2	ENSMUST00000205316	protein_coding	principal1	7	-1	127195987	2912
ENSMUSG00000027342	protein_coding	Pcna	ENSMUST00000140338	retained_intron		2	-1	132250170	931
ENSMUSG00000031971	protein_coding	Ccsap	ENSMUST00000034452	protein_coding	principal1	8	-1	123859530	2390
ENSMUSG00000084808	processed_transcript	9430091E24Rik	ENSMUST00000127301	processed_transcript		8	-1	111145459	1067
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000131238	protein_coding		16	1	32673178	742
ENSMUSG00000039956	protein_coding	Mrap	ENSMUST00000125429	nonsense_mediated_decay		16	1	90738207	1203
ENSMUSG00000042502	protein_coding	Cd2bp2	ENSMUST00000035771	protein_coding	principal1	7	-1	127195875	1309
ENSMUSG00000084808	processed_transcript	9430091E24Rik	ENSMUST00000143719	processed_transcript		8	-1	111145480	1021
ENSMUSG00000099964	antisense	Gm29514	ENSMUST00000186665	antisense		1	-1	146494951	2214
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000239117	processed_transcript		16	1	32673183	425
ENSMUSG00000039956	protein_coding	Mrap	ENSMUST00000133973	processed_transcript		16	1	90738324	575
ENSMUSG00000034354	protein_coding	Mtmr3	ENSMUST00000040448	protein_coding	principal1	11	-1	4546268	5534
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000115121	protein_coding		16	1	32673192	1096
ENSMUSG00000042502	protein_coding	Cd2bp2	ENSMUST00000205355	nonsense_mediated_decay		7	-1	127195444	496
ENSMUSG00000099964	antisense	Gm29514	ENSMUST00000185686	antisense		1	-1	146495060	611
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000168506	retained_intron		16	1	32673195	769
ENSMUSG00000039826	protein_coding	Trub2	ENSMUST00000156846	nonsense_mediated_decay		2	-1	29787660	3930
ENSMUSG00000042502	protein_coding	Cd2bp2	ENSMUST00000205321	protein_coding		7	-1	127195942	538
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000152361	protein_coding		16	1	32673199	939
ENSMUSG00000031971	protein_coding	Ccsap	ENSMUST00000122421	protein_coding	principal1	8	-1	123860209	2673
ENSMUSG00000034354	protein_coding	Mtmr3	ENSMUST00000123506	protein_coding		11	-1	4528406	5466
ENSMUSG00000042502	protein_coding	Cd2bp2	ENSMUST00000206587	protein_coding		7	-1	127195966	920
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000239161	processed_transcript		16	1	32677931	491
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000238815	nonsense_mediated_decay		16	1	32679709	1732
ENSMUSG00000042502	protein_coding	Cd2bp2	ENSMUST00000206081	protein_coding		7	-1	127196050	432
ENSMUSG00000022791	protein_coding	Tnk2	ENSMUST00000232650	retained_intron		16	1	32680814	690
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000095754	protein_coding	alternative1	6	1	86404219	1789
ENSMUSG00000082900	processed_pseudogene	Gm11557	ENSMUST00000120200	processed_pseudogene		11	1	99678126	1008
ENSMUSG00000034354	protein_coding	Mtmr3	ENSMUST00000130716	nonsense_mediated_decay		11	-1	4594863	4040
ENSMUSG00000039956	protein_coding	Mrap	ENSMUST00000138984	nonsense_mediated_decay		16	1	90738324	661
ENSMUSG00000034354	protein_coding	Mtmr3	ENSMUST00000128256	protein_coding		11	-1	4528406	3520
ENSMUSG00000106190	processed_pseudogene	Gm20768	ENSMUST00000199527	processed_pseudogene		5	-1	137189167	2338
ENSMUSG00000101173	processed_pseudogene	Gm29519	ENSMUST00000186994	processed_pseudogene		1	1	83157984	398
ENSMUSG00000034354	protein_coding	Mtmr3	ENSMUST00000144242	processed_transcript		11	-1	4493318	786
ENSMUSG00000103654	processed_pseudogene	Gm37203	ENSMUST00000191618	processed_pseudogene		3	1	51370222	385
ENSMUSG00000022827	protein_coding	Rabl3	ENSMUST00000023524	protein_coding	principal1	16	1	37539885	2031
ENSMUSG00000082344	unprocessed_pseudogene	4930415H17Rik	ENSMUST00000122396	unprocessed_pseudogene		11	-1	99683740	123
ENSMUSG00000020523	protein_coding	Fam114a2	ENSMUST00000020831	protein_coding	principal3	11	-1	57518617	2557
ENSMUSG00000033624	protein_coding	Pdpr	ENSMUST00000135302	protein_coding		8	1	111094630	639
ENSMUSG00000092349	protein_coding	Smim40	ENSMUST00000172817	protein_coding	principal1	17	1	33905135	807
ENSMUSG00000034354	protein_coding	Mtmr3	ENSMUST00000109943	protein_coding	principal1	11	-1	4594815	5674
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000025027	protein_coding	principal3	17	-1	26939569	741
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000095753	protein_coding	principal3	6	1	86404219	4477
ENSMUSG00000058260	protein_coding	Serpina9	ENSMUST00000058464	protein_coding	principal1	12	-1	104013652	3571
ENSMUSG00000039956	protein_coding	Mrap	ENSMUST00000038197	protein_coding	principal1	16	1	90738324	1001
ENSMUSG00000039826	protein_coding	Trub2	ENSMUST00000048044	protein_coding	principal1	2	-1	29788502	3408
ENSMUSG00000102125	lincRNA	Gm28520	ENSMUST00000189379	lincRNA		Y	-1	33449259	1493
ENSMUSG00000022827	protein_coding	Rabl3	ENSMUST00000130028	nonsense_mediated_decay		16	1	37539900	1960
ENSMUSG00000094840	protein_coding	Muc3a	ENSMUST00000196391	protein_coding	principal5	5	-1	137212148	1877
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000203206	retained_intron		6	1	86404235	935
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000237609	retained_intron		17	-1	26939423	785
ENSMUSG00000094840	protein_coding	Muc3a	ENSMUST00000179412	protein_coding	alternative2	5	-1	137212389	1881
ENSMUSG00000058260	protein_coding	Serpina9	ENSMUST00000164023	protein_coding		12	-1	104013755	781
ENSMUSG00000029869	protein_coding	Ephb6	ENSMUST00000114732	protein_coding	principal1	6	1	41605482	3762
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000154983	processed_transcript		6	1	86404282	422
ENSMUSG00000078276	protein_coding	Gm14190	ENSMUST00000105073	protein_coding	principal1	11	-1	99690740	153
ENSMUSG00000039826	protein_coding	Trub2	ENSMUST00000176312	nonsense_mediated_decay		2	-1	29787634	763
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000236888	nonsense_mediated_decay		17	-1	26939434	719
ENSMUSG00000105636	lincRNA	Gm43625	ENSMUST00000199177	lincRNA		5	-1	146204789	1539
ENSMUSG00000020473	protein_coding	Aebp1	ENSMUST00000102923	protein_coding	principal2	11	1	5861947	3831
ENSMUSG00000093753	processed_transcript	Gm28577	ENSMUST00000176106	processed_transcript		12	-1	103996579	741
ENSMUSG00000118602	unprocessed_pseudogene	AL590997.1	ENSMUST00000239266	unprocessed_pseudogene		11	-1	99696404	213
ENSMUSG00000022827	protein_coding	Rabl3	ENSMUST00000128036	retained_intron		16	1	37539905	4332
ENSMUSG00000102125	lincRNA	Gm28520	ENSMUST00000190808	lincRNA		Y	-1	33448806	612
ENSMUSG00000102125	lincRNA	Gm28520	ENSMUST00000187225	lincRNA		Y	-1	33448806	431
ENSMUSG00000039826	protein_coding	Trub2	ENSMUST00000177467	protein_coding		2	-1	29787622	744
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000141960	retained_intron		6	1	86404291	4420
ENSMUSG00000022538	protein_coding	Lsg1	ENSMUST00000143170	processed_transcript		16	-1	30587589	2272
ENSMUSG00000022827	protein_coding	Rabl3	ENSMUST00000140799	retained_intron		16	1	37563734	655
ENSMUSG00000115838	processed_pseudogene	Gm46507	ENSMUST00000228640	processed_pseudogene		15	-1	60296950	536
ENSMUSG00000118634	unprocessed_pseudogene	AL590997.3	ENSMUST00000239224	unprocessed_pseudogene		11	-1	99699677	93
ENSMUSG00000020473	protein_coding	Aebp1	ENSMUST00000109829	protein_coding	alternative2	11	1	5867602	2541
ENSMUSG00000116677	TEC	Gm49569	ENSMUST00000232317	TEC		16	1	37549169	281
ENSMUSG00000029869	protein_coding	Ephb6	ENSMUST00000170624	processed_transcript		6	1	41613298	714
ENSMUSG00000031154	protein_coding	Otud5	ENSMUST00000152899	processed_transcript		X	1	7841364	347
ENSMUSG00000039826	protein_coding	Trub2	ENSMUST00000177133	nonsense_mediated_decay		2	-1	29787671	806
ENSMUSG00000115251	processed_pseudogene	Gm4774	ENSMUST00000228258	processed_pseudogene		15	1	60392119	1051
ENSMUSG00000020473	protein_coding	Aebp1	ENSMUST00000138103	processed_transcript		11	1	5869148	673
ENSMUSG00000039826	protein_coding	Trub2	ENSMUST00000176167	retained_intron		2	-1	29782342	412
ENSMUSG00000029869	protein_coding	Ephb6	ENSMUST00000167082	nonsense_mediated_decay		6	1	41614692	665
ENSMUSG00000087104	antisense	Tmem132cos	ENSMUST00000145064	antisense		5	-1	127281634	604
ENSMUSG00000020523	protein_coding	Fam114a2	ENSMUST00000108850	protein_coding	alternative2	11	-1	57518603	1765
ENSMUSG00000039826	protein_coding	Trub2	ENSMUST00000148120	retained_intron		2	-1	29782196	762
ENSMUSG00000107212	processed_pseudogene	Gm5302	ENSMUST00000202130	processed_pseudogene		6	-1	25047298	796
ENSMUSG00000028282	protein_coding	Casp8ap2	ENSMUST00000029950	protein_coding	principal2	4	1	32615478	6799
ENSMUSG00000112043	processed_pseudogene	Gm48774	ENSMUST00000218559	processed_pseudogene		12	1	9690691	980
ENSMUSG00000112787	lincRNA	Gm48790	ENSMUST00000220360	lincRNA		12	1	9729519	1323
ENSMUSG00000087104	antisense	Tmem132cos	ENSMUST00000154361	antisense		5	-1	127281597	699
ENSMUSG00000112787	lincRNA	Gm48790	ENSMUST00000217846	lincRNA		12	1	9729519	1204
ENSMUSG00000028282	protein_coding	Casp8ap2	ENSMUST00000108178	protein_coding	alternative2	4	1	32624084	1189
ENSMUSG00000110421	processed_pseudogene	Gm9689	ENSMUST00000210009	processed_pseudogene		7	-1	11211327	428
ENSMUSG00000047712	protein_coding	Ust	ENSMUST00000219116	processed_transcript		10	-1	8302242	3670
ENSMUSG00000029869	protein_coding	Ephb6	ENSMUST00000167497	protein_coding		6	1	41619943	459
ENSMUSG00000111942	processed_pseudogene	Gm5182	ENSMUST00000217708	processed_pseudogene		12	1	10152142	6092
ENSMUSG00000039826	protein_coding	Trub2	ENSMUST00000113803	retained_intron		2	-1	29787630	490
ENSMUSG00000087104	antisense	Tmem132cos	ENSMUST00000155106	antisense		5	-1	127281594	616
ENSMUSG00000020523	protein_coding	Fam114a2	ENSMUST00000130596	processed_transcript		11	-1	57518602	759
ENSMUSG00000105736	lincRNA	Gm42456	ENSMUST00000196840	lincRNA		5	-1	137288662	387
ENSMUSG00000110112	unprocessed_pseudogene	Gm39481	ENSMUST00000210379	unprocessed_pseudogene		7	1	11233147	512
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000114935	protein_coding	alternative1	17	-1	26939543	662
ENSMUSG00000039826	protein_coding	Trub2	ENSMUST00000175644	retained_intron		2	-1	29787633	371
ENSMUSG00000095813	unprocessed_pseudogene	Defa-ps1	ENSMUST00000119062	unprocessed_pseudogene		8	1	21695012	282
ENSMUSG00000028282	protein_coding	Casp8ap2	ENSMUST00000127619	processed_transcript		4	1	32615470	595
ENSMUSG00000020523	protein_coding	Fam114a2	ENSMUST00000129596	processed_transcript		11	-1	57507428	660
ENSMUSG00000028282	protein_coding	Casp8ap2	ENSMUST00000124278	processed_transcript		4	1	32615451	300
ENSMUSG00000093520	unprocessed_pseudogene	Vmn1r-ps9	ENSMUST00000177047	unprocessed_pseudogene		6	1	57278028	629
ENSMUSG00000022538	protein_coding	Lsg1	ENSMUST00000150499	retained_intron		16	-1	30587563	2360
ENSMUSG00000039523	protein_coding	Cep104	ENSMUST00000047497	protein_coding	principal1	4	1	153975194	5151
ENSMUSG00000028282	protein_coding	Casp8ap2	ENSMUST00000178925	protein_coding	principal2	4	1	32615473	6557
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000235341	retained_intron		17	-1	26939533	1476
ENSMUSG00000022538	protein_coding	Lsg1	ENSMUST00000124858	retained_intron		16	-1	30568109	879
ENSMUSG00000039904	protein_coding	Gpr37	ENSMUST00000200812	protein_coding		6	-1	25689792	3035
ENSMUSG00000087592	lincRNA	Gm11184	ENSMUST00000126437	lincRNA		4	1	83383064	268
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000200351	retained_intron		3	1	35754106	1906
ENSMUSG00000040033	protein_coding	Stat2	ENSMUST00000218863	retained_intron		10	1	128270559	736
ENSMUSG00000022538	protein_coding	Lsg1	ENSMUST00000144666	retained_intron		16	-1	30587592	2724
ENSMUSG00000022538	protein_coding	Lsg1	ENSMUST00000123286	processed_transcript		16	-1	30585650	709
ENSMUSG00000058618	protein_coding	Defa39	ENSMUST00000071886	protein_coding	principal1	8	-1	21703645	503
ENSMUSG00000022538	protein_coding	Lsg1	ENSMUST00000231238	retained_intron		16	-1	30575243	780
ENSMUSG00000086321	antisense	Gm11413	ENSMUST00000155822	antisense		4	-1	83390668	1461
ENSMUSG00000039523	protein_coding	Cep104	ENSMUST00000183790	nonsense_mediated_decay		4	1	153988467	1787
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000236326	retained_intron		17	-1	26939545	937
ENSMUSG00000025324	protein_coding	Atp10a	ENSMUST00000168747	protein_coding	principal1	7	1	58658246	5419
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000236536	processed_transcript		17	-1	26939205	419
ENSMUSG00000039904	protein_coding	Gpr37	ENSMUST00000054867	protein_coding	principal1	6	-1	25690729	4974
ENSMUSG00000039523	protein_coding	Cep104	ENSMUST00000155414	retained_intron		4	1	153989206	388
ENSMUSG00000081668	processed_pseudogene	Gm7869	ENSMUST00000121457	processed_pseudogene		8	1	21708029	1322
ENSMUSG00000022538	protein_coding	Lsg1	ENSMUST00000128561	retained_intron		16	-1	30587574	692
ENSMUSG00000016918	protein_coding	Sulf1	ENSMUST00000177608	protein_coding	principal1	1	1	12692277	5598
ENSMUSG00000109393	TEC	Gm44936	ENSMUST00000207324	TEC		7	1	58675421	735
ENSMUSG00000094616	protein_coding	Gm20888	ENSMUST00000186890	protein_coding	principal5	Y	1	70441882	919
ENSMUSG00000047712	protein_coding	Ust	ENSMUST00000061601	protein_coding	principal1	10	-1	8518825	4228
ENSMUSG00000094616	protein_coding	Gm20888	ENSMUST00000178934	protein_coding	alternative2	Y	1	70443305	567
ENSMUSG00000023328	protein_coding	Ache	ENSMUST00000132191	protein_coding		5	1	137287519	262
ENSMUSG00000096340	unprocessed_pseudogene	Defa-ps10	ENSMUST00000121649	unprocessed_pseudogene		8	1	21722070	171
ENSMUSG00000023328	protein_coding	Ache	ENSMUST00000138591	protein_coding		5	1	137287766	409
ENSMUSG00000022538	protein_coding	Lsg1	ENSMUST00000129004	retained_intron		16	-1	30587539	628
ENSMUSG00000027342	protein_coding	Pcna	ENSMUST00000028817	protein_coding	principal1	2	-1	132253314	1518
ENSMUSG00000100653	lincRNA	Gm28238	ENSMUST00000188102	lincRNA		Y	-1	70523822	383
ENSMUSG00000023328	protein_coding	Ache	ENSMUST00000141123	protein_coding		5	1	137287766	438
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000236623	processed_transcript		17	-1	26939391	622
ENSMUSG00000111925	lincRNA	Gm48791	ENSMUST00000218811	lincRNA		12	1	10177143	380
ENSMUSG00000063232	protein_coding	Serpina11	ENSMUST00000120251	protein_coding	alternative1	12	-1	103989957	1461
ENSMUSG00000112783	TEC	Gm48792	ENSMUST00000218069	TEC		12	-1	10222329	2470
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000236906	retained_intron		17	-1	26939464	737
ENSMUSG00000109798	processed_pseudogene	Gm5996	ENSMUST00000211110	processed_pseudogene		7	-1	11249121	718
ENSMUSG00000083764	processed_pseudogene	Gm11516	ENSMUST00000118450	processed_pseudogene		11	-1	90861348	1582
ENSMUSG00000110192	processed_pseudogene	Gm9652	ENSMUST00000209345	processed_pseudogene		7	-1	11253864	163
ENSMUSG00000024194	protein_coding	Cuta	ENSMUST00000235460	retained_intron		17	-1	26939538	475
ENSMUSG00000113923	processed_pseudogene	Gm10126	ENSMUST00000221732	processed_pseudogene		13	-1	73989133	168
ENSMUSG00000085940	lincRNA	4930405D11Rik	ENSMUST00000142521	lincRNA		11	1	90804692	645
ENSMUSG00000085940	lincRNA	4930405D11Rik	ENSMUST00000142163	lincRNA		11	1	90883320	569
ENSMUSG00000109976	processed_pseudogene	Gm19683	ENSMUST00000209748	processed_pseudogene		7	-1	11290860	1781
ENSMUSG00000057894	protein_coding	Zfp329	ENSMUST00000108546	protein_coding		7	-1	12818854	2577
ENSMUSG00000016918	protein_coding	Sulf1	ENSMUST00000180062	protein_coding	principal1	1	1	12692323	4636
ENSMUSG00000085940	lincRNA	4930405D11Rik	ENSMUST00000132218	lincRNA		11	1	90883345	568
ENSMUSG00000027342	protein_coding	Pcna	ENSMUST00000136676	processed_transcript		2	-1	132252596	589
ENSMUSG00000016918	protein_coding	Sulf1	ENSMUST00000186051	protein_coding		1	1	12692532	4563
ENSMUSG00000024989	protein_coding	Cep55	ENSMUST00000235601	retained_intron		19	1	38055011	859
ENSMUSG00000063232	protein_coding	Serpina11	ENSMUST00000074693	protein_coding	principal3	12	-1	103989927	1447
ENSMUSG00000027342	protein_coding	Pcna	ENSMUST00000135181	retained_intron		2	-1	132252967	824
ENSMUSG00000057894	protein_coding	Zfp329	ENSMUST00000072222	protein_coding	principal1	7	-1	12818858	6727
ENSMUSG00000027342	protein_coding	Pcna	ENSMUST00000149627	retained_intron		2	-1	132252602	641
ENSMUSG00000019846	protein_coding	Lama4	ENSMUST00000159506	retained_intron		10	1	38965515	2620
ENSMUSG00000057894	protein_coding	Zfp329	ENSMUST00000129647	processed_transcript		7	-1	12808075	684
ENSMUSG00000063232	protein_coding	Serpina11	ENSMUST00000176246	protein_coding		12	-1	103989919	930
ENSMUSG00000057894	protein_coding	Zfp329	ENSMUST00000121215	nonsense_mediated_decay		7	-1	12818852	2564
ENSMUSG00000063232	protein_coding	Serpina11	ENSMUST00000151709	protein_coding		12	-1	103989917	743
ENSMUSG00000029491	protein_coding	Pde6b	ENSMUST00000031456	protein_coding	principal1	5	1	108388391	2799
ENSMUSG00000101421	processed_pseudogene	Gm28433	ENSMUST00000187085	processed_pseudogene		Y	-1	70558726	315
ENSMUSG00000016918	protein_coding	Sulf1	ENSMUST00000187376	retained_intron		1	1	12718459	2746
ENSMUSG00000082766	protein_coding	1700064H15Rik	ENSMUST00000119133	protein_coding	principal1	3	-1	19628677	394
ENSMUSG00000063232	protein_coding	Serpina11	ENSMUST00000139777	processed_transcript		12	-1	103989941	392
ENSMUSG00000005683	protein_coding	Cs	ENSMUST00000005826	protein_coding	principal1	10	1	128337734	2926
ENSMUSG00000101706	lincRNA	Gm28431	ENSMUST00000185592	lincRNA		Y	-1	70563472	2166
ENSMUSG00000080729	unprocessed_pseudogene	Gm8084	ENSMUST00000120807	unprocessed_pseudogene		1	-1	107193557	752
ENSMUSG00000084339	processed_pseudogene	Gm6141	ENSMUST00000117181	processed_pseudogene		3	1	19584791	695
ENSMUSG00000102985	TEC	4930456G14Rik	ENSMUST00000193054	TEC		1	-1	40050368	1330
ENSMUSG00000110119	lincRNA	Gm45593	ENSMUST00000211415	lincRNA		7	1	12825918	752
ENSMUSG00000005683	protein_coding	Cs	ENSMUST00000218159	retained_intron		10	1	128337810	3003
ENSMUSG00000101627	lincRNA	Gm28432	ENSMUST00000185237	lincRNA		Y	1	70595458	1499
ENSMUSG00000114372	lincRNA	2310067P03Rik	ENSMUST00000225970	lincRNA		13	1	83065457	1032
ENSMUSG00000101627	lincRNA	Gm28432	ENSMUST00000189356	lincRNA		Y	1	70595911	438
ENSMUSG00000016918	protein_coding	Sulf1	ENSMUST00000088585	protein_coding	principal1	1	1	12718529	4630
ENSMUSG00000114735	processed_pseudogene	Gm48156	ENSMUST00000224835	processed_pseudogene		13	-1	83189709	145
ENSMUSG00000101202	transcribed_unprocessed_pseudogene	Gm28749	ENSMUST00000187886	processed_transcript		Y	-1	66771942	1600
ENSMUSG00000034324	protein_coding	Tmem132c	ENSMUST00000119026	protein_coding	principal1	5	1	127241808	5134
ENSMUSG00000101202	transcribed_unprocessed_pseudogene	Gm28749	ENSMUST00000187827	processed_transcript		Y	-1	66771942	571
ENSMUSG00000029491	protein_coding	Pde6b	ENSMUST00000134865	retained_intron		5	1	108388426	4088
ENSMUSG00000016918	protein_coding	Sulf1	ENSMUST00000189541	protein_coding		1	1	12719464	366
ENSMUSG00000029491	protein_coding	Pde6b	ENSMUST00000130448	retained_intron		5	1	108430377	1225
ENSMUSG00000070379	protein_coding	Olfr402	ENSMUST00000216722	protein_coding	principal1	11	1	74153529	3566
ENSMUSG00000103196	TEC	Gm37641	ENSMUST00000193837	TEC		13	-1	85411919	239
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000200445	processed_transcript		3	1	35754134	3028
ENSMUSG00000101202	transcribed_unprocessed_pseudogene	Gm28749	ENSMUST00000187668	processed_transcript		Y	-1	66771885	333
ENSMUSG00000101167	processed_pseudogene	Macroh2a3	ENSMUST00000151919	processed_pseudogene		15	-1	62219332	1112
ENSMUSG00000023328	protein_coding	Ache	ENSMUST00000024099	protein_coding	principal1	5	1	137288277	2186
ENSMUSG00000114211	processed_pseudogene	Gm47635	ENSMUST00000224871	processed_pseudogene		13	1	85516402	218
ENSMUSG00000034324	protein_coding	Tmem132c	ENSMUST00000134780	processed_transcript		5	1	127241826	669
ENSMUSG00000101202	transcribed_unprocessed_pseudogene	Gm28749	ENSMUST00000186306	processed_transcript		Y	-1	66771860	654
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000032934	protein_coding	principal3	7	-1	126799254	1511
ENSMUSG00000016918	protein_coding	Sulf1	ENSMUST00000186405	protein_coding		1	1	12728119	815
ENSMUSG00000070379	protein_coding	Olfr402	ENSMUST00000073675	protein_coding	principal1	11	1	74155115	1012
ENSMUSG00000114506	processed_pseudogene	Gm5666	ENSMUST00000224841	processed_pseudogene		13	-1	85573578	603
ENSMUSG00000101202	transcribed_unprocessed_pseudogene	Gm28749	ENSMUST00000188477	processed_transcript		Y	-1	66771886	543
ENSMUSG00000016918	protein_coding	Sulf1	ENSMUST00000186674	retained_intron		1	1	12785443	2581
ENSMUSG00000023328	protein_coding	Ache	ENSMUST00000196208	protein_coding		5	1	137288283	1911
ENSMUSG00000086037	lincRNA	Gm16085	ENSMUST00000144575	lincRNA		12	1	107129681	453
ENSMUSG00000101202	transcribed_unprocessed_pseudogene	Gm28749	ENSMUST00000188513	processed_transcript		Y	-1	66771885	119
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000196700	retained_intron		3	1	35754134	6322
ENSMUSG00000101202	transcribed_unprocessed_pseudogene	Gm28749	ENSMUST00000189390	processed_transcript		Y	-1	66771842	397
ENSMUSG00000023328	protein_coding	Ache	ENSMUST00000085934	protein_coding	principal1	5	1	137288284	2176
ENSMUSG00000016918	protein_coding	Sulf1	ENSMUST00000189447	retained_intron		1	1	12836028	747
ENSMUSG00000034324	protein_coding	Tmem132c	ENSMUST00000128068	processed_transcript		5	1	127538260	2754
ENSMUSG00000070378	protein_coding	Olfr403	ENSMUST00000206114	protein_coding	principal1	11	1	74186249	3444
ENSMUSG00000034324	protein_coding	Tmem132c	ENSMUST00000132592	processed_transcript		5	1	127541626	2754
ENSMUSG00000100361	processed_pseudogene	Gm7063	ENSMUST00000186840	processed_pseudogene		1	-1	45520754	981
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000106348	protein_coding	principal3	7	-1	126800447	1460
ENSMUSG00000028359	protein_coding	Orm3	ENSMUST00000006687	protein_coding	principal1	4	1	63356162	773
ENSMUSG00000114447	processed_pseudogene	Gm47636	ENSMUST00000224158	processed_pseudogene		13	-1	85865333	222
ENSMUSG00000101202	transcribed_unprocessed_pseudogene	Gm28749	ENSMUST00000185923	processed_transcript		Y	-1	66769893	229
ENSMUSG00000023328	protein_coding	Ache	ENSMUST00000150983	retained_intron		5	1	137288285	3687
ENSMUSG00000034324	protein_coding	Tmem132c	ENSMUST00000145748	protein_coding		5	1	127553254	474
ENSMUSG00000101202	transcribed_unprocessed_pseudogene	Gm28749	ENSMUST00000189599	transcribed_unprocessed_pseudogene		Y	-1	66770329	614
ENSMUSG00000070378	protein_coding	Olfr403	ENSMUST00000206247	processed_transcript		11	1	74186273	493
ENSMUSG00000016918	protein_coding	Sulf1	ENSMUST00000185780	protein_coding		1	1	12842791	2682
ENSMUSG00000023328	protein_coding	Ache	ENSMUST00000125195	protein_coding		5	1	137289088	360
ENSMUSG00000114900	processed_pseudogene	Gm46396	ENSMUST00000224403	processed_pseudogene		13	1	85891742	384
ENSMUSG00000111917	processed_pseudogene	Gm48793	ENSMUST00000218052	processed_pseudogene		12	1	10322866	3778
ENSMUSG00000026833	protein_coding	Olfm1	ENSMUST00000028177	protein_coding	principal1	2	1	28205659	2757
ENSMUSG00000104971	TEC	9430087B13Rik	ENSMUST00000196548	TEC		5	1	127309017	1085
ENSMUSG00000093621	unprocessed_pseudogene	Vmn1r-ps10	ENSMUST00000176165	unprocessed_pseudogene		6	1	57312939	889
ENSMUSG00000033624	protein_coding	Pdpr	ENSMUST00000039333	protein_coding	principal1	8	1	111094641	4938
ENSMUSG00000112377	processed_pseudogene	Gm48794	ENSMUST00000219281	processed_pseudogene		12	-1	10368670	205
ENSMUSG00000023328	protein_coding	Ache	ENSMUST00000137126	protein_coding		5	1	137289247	254
ENSMUSG00000082246	processed_pseudogene	Gm13047	ENSMUST00000117116	processed_pseudogene		4	1	141084864	815
ENSMUSG00000070378	protein_coding	Olfr403	ENSMUST00000076675	protein_coding	principal1	11	1	74195505	942
ENSMUSG00000118639	unprocessed_pseudogene	AL590997.4	ENSMUST00000239175	unprocessed_pseudogene		11	-1	99705150	147
ENSMUSG00000069189	protein_coding	Zdhhc11	ENSMUST00000222487	nonsense_mediated_decay		13	1	73963851	1516
ENSMUSG00000086060	lincRNA	Gm16084	ENSMUST00000148122	lincRNA		12	-1	107160207	620
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000159119	lincRNA		1	1	161034929	665
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000081726	protein_coding	principal1	4	1	132639046	5160
ENSMUSG00000115792	protein_coding	Vmn1r16	ENSMUST00000227283	protein_coding	principal2	6	-1	57329494	5813
ENSMUSG00000105826	TEC	Gm42141	ENSMUST00000196534	TEC		5	1	105495470	2172
ENSMUSG00000115792	protein_coding	Vmn1r16	ENSMUST00000228356	protein_coding	alternative2	6	-1	57329494	3492
ENSMUSG00000030401	protein_coding	Rtn2	ENSMUST00000032559	protein_coding	principal3	7	1	19282624	1990
ENSMUSG00000033624	protein_coding	Pdpr	ENSMUST00000144377	nonsense_mediated_decay		8	1	111094655	3076
ENSMUSG00000115792	protein_coding	Vmn1r16	ENSMUST00000227168	protein_coding	principal2	6	-1	57323635	912
ENSMUSG00000084871	lincRNA	Gm2800	ENSMUST00000122988	lincRNA		12	1	107183555	641
ENSMUSG00000026833	protein_coding	Olfm1	ENSMUST00000113920	protein_coding		2	1	28192992	2513
ENSMUSG00000020715	protein_coding	Ern1	ENSMUST00000001059	protein_coding	principal1	11	-1	106487796	6946
ENSMUSG00000100894	processed_pseudogene	Gm8304	ENSMUST00000185744	processed_pseudogene		1	1	45602026	584
ENSMUSG00000082362	processed_pseudogene	Gm5187	ENSMUST00000117317	processed_pseudogene		12	-1	107206066	991
ENSMUSG00000030401	protein_coding	Rtn2	ENSMUST00000209186	retained_intron		7	1	19282635	3498
ENSMUSG00000095936	protein_coding	Zscan4e	ENSMUST00000166753	protein_coding	principal1	7	-1	11310659	1722
ENSMUSG00000020715	protein_coding	Ern1	ENSMUST00000106801	protein_coding		11	-1	106487836	1957
ENSMUSG00000026833	protein_coding	Olfm1	ENSMUST00000102879	protein_coding		2	1	28205659	1072
ENSMUSG00000095936	protein_coding	Zscan4e	ENSMUST00000210521	protein_coding	principal1	7	-1	11310682	1745
ENSMUSG00000030401	protein_coding	Rtn2	ENSMUST00000108468	protein_coding	alternative2	7	1	19291069	1076
ENSMUSG00000069189	protein_coding	Zdhhc11	ENSMUST00000091493	protein_coding	principal1	13	1	73963853	1460
ENSMUSG00000073602	protein_coding	Serpinb3b	ENSMUST00000086694	protein_coding	principal1	1	-1	107161114	1653
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000139928	processed_transcript		6	1	86404296	612
ENSMUSG00000080707	processed_pseudogene	Gm13823	ENSMUST00000119930	processed_pseudogene		5	-1	114868025	345
ENSMUSG00000108494	TEC	Gm45203	ENSMUST00000206384	TEC		7	-1	80112634	1831
ENSMUSG00000073602	protein_coding	Serpinb3b	ENSMUST00000166100	protein_coding	principal1	1	-1	107278361	1632
ENSMUSG00000107108	antisense	Gm9936	ENSMUST00000238307	antisense		5	-1	114859383	4359
ENSMUSG00000069189	protein_coding	Zdhhc11	ENSMUST00000222951	nonsense_mediated_decay		13	1	73963862	1293
ENSMUSG00000026833	protein_coding	Olfm1	ENSMUST00000152415	processed_transcript		2	1	28192992	1102
ENSMUSG00000107108	antisense	Gm9936	ENSMUST00000201635	antisense		5	-1	114858682	2925
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000087566	protein_coding	alternative1	7	-1	126799141	1549
ENSMUSG00000020715	protein_coding	Ern1	ENSMUST00000131895	processed_transcript		11	-1	106487852	3354
ENSMUSG00000027606	protein_coding	Dnajc5b	ENSMUST00000118968	protein_coding	principal1	3	1	19508595	806
ENSMUSG00000024391	protein_coding	Apom	ENSMUST00000025249	protein_coding	principal1	17	-1	35132050	1013
ENSMUSG00000005986	protein_coding	Ankrd13d	ENSMUST00000056888	protein_coding	principal1	19	-1	4283135	2139
ENSMUSG00000086926	processed_pseudogene	Gm6226	ENSMUST00000117765	processed_pseudogene		7	-1	58837938	1146
ENSMUSG00000020715	protein_coding	Ern1	ENSMUST00000106799	protein_coding		11	-1	106487803	660
ENSMUSG00000026833	protein_coding	Olfm1	ENSMUST00000100244	protein_coding		2	1	28193093	2686
ENSMUSG00000020715	protein_coding	Ern1	ENSMUST00000106800	protein_coding		11	-1	106487808	654
ENSMUSG00000087377	antisense	AV099323	ENSMUST00000124336	antisense		2	1	132253357	921
ENSMUSG00000027606	protein_coding	Dnajc5b	ENSMUST00000029132	protein_coding	principal1	3	1	19508615	923
ENSMUSG00000050478	protein_coding	Olfr807	ENSMUST00000217106	protein_coding	principal1	10	-1	129757793	1788
ENSMUSG00000050478	protein_coding	Olfr807	ENSMUST00000213379	protein_coding	principal1	10	-1	129757743	1866
ENSMUSG00000027606	protein_coding	Dnajc5b	ENSMUST00000118735	protein_coding	principal1	3	1	19530671	1035
ENSMUSG00000090090	unprocessed_pseudogene	Mup-ps16	ENSMUST00000120085	unprocessed_pseudogene		4	1	61797482	596
ENSMUSG00000027606	protein_coding	Dnajc5b	ENSMUST00000165693	protein_coding	principal1	3	1	19531247	955
ENSMUSG00000050478	protein_coding	Olfr807	ENSMUST00000059038	protein_coding	principal1	10	-1	129755485	997
ENSMUSG00000116691	processed_pseudogene	Gm8363	ENSMUST00000231799	processed_pseudogene		17	-1	5482964	1703
ENSMUSG00000081207	processed_transcript	Gm13775	ENSMUST00000153865	processed_transcript		4	1	61783123	751
ENSMUSG00000110621	protein_coding	Olfr837	ENSMUST00000215699	protein_coding	principal1	9	1	19136317	3758
ENSMUSG00000005986	protein_coding	Ankrd13d	ENSMUST00000163858	nonsense_mediated_decay		19	-1	4283137	2131
ENSMUSG00000110621	protein_coding	Olfr837	ENSMUST00000212482	protein_coding	principal1	9	1	19136928	1040
ENSMUSG00000005986	protein_coding	Ankrd13d	ENSMUST00000166031	nonsense_mediated_decay		19	-1	4271294	480
ENSMUSG00000073601	protein_coding	Serpinb3c	ENSMUST00000027565	protein_coding	principal1	1	-1	107278371	1659
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000135707	processed_transcript		7	-1	126798282	945
ENSMUSG00000005986	protein_coding	Ankrd13d	ENSMUST00000170283	nonsense_mediated_decay		19	-1	4281011	487
ENSMUSG00000061477	protein_coding	Rps7	ENSMUST00000074267	protein_coding	principal1	12	-1	28635953	954
ENSMUSG00000028539	protein_coding	Artn	ENSMUST00000070816	protein_coding	principal1	4	-1	117929763	2177
ENSMUSG00000049894	protein_coding	Olfr808	ENSMUST00000203236	protein_coding	principal1	10	1	129765482	4523
ENSMUSG00000005986	protein_coding	Ankrd13d	ENSMUST00000169653	processed_transcript		19	-1	4283137	1217
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000143509	retained_intron		7	-1	126797751	891
ENSMUSG00000081114	processed_pseudogene	Gm15390	ENSMUST00000120323	processed_pseudogene		1	-1	107254290	738
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000139657	retained_intron		7	-1	126798307	1352
ENSMUSG00000005986	protein_coding	Ankrd13d	ENSMUST00000167215	protein_coding		19	-1	4283033	639
ENSMUSG00000049894	protein_coding	Olfr808	ENSMUST00000060636	protein_coding	principal1	10	1	129767498	939
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000151137	protein_coding		7	-1	126800046	776
ENSMUSG00000118344	antisense	Gm50152	ENSMUST00000236541	antisense		19	1	4273987	509
ENSMUSG00000061477	protein_coding	Rps7	ENSMUST00000223153	retained_intron		12	-1	28631917	405
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000205890	protein_coding		7	-1	126798993	762
ENSMUSG00000110645	unprocessed_pseudogene	Olfr838-ps1	ENSMUST00000211872	unprocessed_pseudogene		9	-1	19154560	977
ENSMUSG00000109713	protein_coding	Pvrig	ENSMUST00000211088	protein_coding	principal1	5	1	138341961	1080
ENSMUSG00000061477	protein_coding	Rps7	ENSMUST00000222808	retained_intron		12	-1	28633908	403
ENSMUSG00000025199	protein_coding	Chuk	ENSMUST00000026217	protein_coding	principal1	19	-1	44107480	3502
ENSMUSG00000061477	protein_coding	Rps7	ENSMUST00000221871	protein_coding	principal1	12	-1	28635857	820
ENSMUSG00000106161	processed_pseudogene	Pvrig-ps	ENSMUST00000199472	processed_pseudogene		5	1	138359838	204
ENSMUSG00000050251	protein_coding	Olfr809	ENSMUST00000203598	protein_coding		10	1	129774638	3260
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000147748	retained_intron		7	-1	126799170	895
ENSMUSG00000028952	protein_coding	Zbtb48	ENSMUST00000155389	nonsense_mediated_decay		4	-1	152027661	2312
ENSMUSG00000061477	protein_coding	Rps7	ENSMUST00000223318	processed_transcript		12	-1	28632390	369
ENSMUSG00000046667	protein_coding	Rbm12b1	ENSMUST00000146416	processed_transcript		4	1	12140264	379
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000141355	protein_coding		7	-1	126800751	879
ENSMUSG00000061477	protein_coding	Rps7	ENSMUST00000220860	retained_intron		12	-1	28635696	697
ENSMUSG00000061477	protein_coding	Rps7	ENSMUST00000222228	retained_intron		12	-1	28635878	420
ENSMUSG00000050251	protein_coding	Olfr809	ENSMUST00000059891	protein_coding	principal1	10	1	129775827	1100
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000205336	protein_coding		7	-1	126799109	796
ENSMUSG00000050251	protein_coding	Olfr809	ENSMUST00000218237	protein_coding		10	1	129775827	1100
ENSMUSG00000028539	protein_coding	Artn	ENSMUST00000097913	protein_coding	principal1	4	-1	117929497	1568
ENSMUSG00000030695	protein_coding	Aldoa	ENSMUST00000133514	protein_coding		7	-1	126800036	626
ENSMUSG00000074227	protein_coding	Spint2	ENSMUST00000207601	nonsense_mediated_decay		7	-1	29281912	1304
ENSMUSG00000110519	protein_coding	Olfr839-ps1	ENSMUST00000212127	protein_coding	principal1	9	-1	19177312	7759
ENSMUSG00000097266	lincRNA	Gm26802	ENSMUST00000181066	lincRNA		7	-1	19300770	2144
ENSMUSG00000108423	processed_pseudogene	Gm44856	ENSMUST00000206639	processed_pseudogene		7	1	126806257	304
ENSMUSG00000075591	lincRNA	Gm10874	ENSMUST00000100526	lincRNA		5	1	138363719	2355
ENSMUSG00000028539	protein_coding	Artn	ENSMUST00000133703	processed_transcript		4	-1	117929477	364
ENSMUSG00000110671	unprocessed_pseudogene	Olfr840-ps1	ENSMUST00000211827	unprocessed_pseudogene		9	-1	19205669	917
ENSMUSG00000112525	processed_pseudogene	Gm47899	ENSMUST00000219949	processed_pseudogene		10	-1	117798765	307
ENSMUSG00000028539	protein_coding	Artn	ENSMUST00000150612	processed_transcript		4	-1	117929413	405
ENSMUSG00000112214	unprocessed_pseudogene	Cyp3a61-ps1	ENSMUST00000218470	unprocessed_pseudogene		5	-1	138391594	592
ENSMUSG00000058523	protein_coding	Mup5	ENSMUST00000082287	protein_coding	principal1	4	-1	61835233	925
ENSMUSG00000110493	unprocessed_pseudogene	AC119987.1	ENSMUST00000212316	unprocessed_pseudogene		9	-1	19232174	848
ENSMUSG00000080935	processed_pseudogene	Got2-ps1	ENSMUST00000121655	processed_pseudogene		5	-1	138365552	1293
ENSMUSG00000046667	protein_coding	Rbm12b1	ENSMUST00000050069	protein_coding	principal1	4	1	12140267	2949
ENSMUSG00000109261	processed_pseudogene	Gm44938	ENSMUST00000208614	processed_pseudogene		7	1	58926564	427
ENSMUSG00000109252	processed_pseudogene	Gm18453	ENSMUST00000208000	processed_pseudogene		7	-1	58949559	626
ENSMUSG00000046667	protein_coding	Rbm12b1	ENSMUST00000138008	processed_transcript		4	1	12140285	832
ENSMUSG00000025199	protein_coding	Chuk	ENSMUST00000119591	protein_coding		19	-1	44107477	3481
ENSMUSG00000069421	protein_coding	Olfr810	ENSMUST00000217283	protein_coding	principal1	10	-1	129794866	4527
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000159706	lincRNA		1	1	161035067	557
ENSMUSG00000097039	lincRNA	Pvt1	ENSMUST00000182956	lincRNA		15	1	62037986	1342
ENSMUSG00000046667	protein_coding	Rbm12b1	ENSMUST00000069128	protein_coding	principal1	4	1	12140317	3069
ENSMUSG00000069421	protein_coding	Olfr810	ENSMUST00000214206	protein_coding	principal1	10	-1	129794917	4809
ENSMUSG00000031967	protein_coding	Afg3l1	ENSMUST00000001520	protein_coding	principal1	8	1	123477903	4227
ENSMUSG00000028952	protein_coding	Zbtb48	ENSMUST00000066715	protein_coding	principal1	4	-1	152027661	2218
ENSMUSG00000069421	protein_coding	Olfr810	ENSMUST00000214878	protein_coding	principal1	10	-1	129794917	4709
ENSMUSG00000097039	lincRNA	Pvt1	ENSMUST00000182075	lincRNA		15	1	62038038	715
ENSMUSG00000111215	lincRNA	Gm48654	ENSMUST00000213934	lincRNA		10	1	8713241	850
ENSMUSG00000069421	protein_coding	Olfr810	ENSMUST00000091986	protein_coding	principal1	10	-1	129791614	1006
ENSMUSG00000097039	lincRNA	Pvt1	ENSMUST00000180432	lincRNA		15	1	62038047	1563
ENSMUSG00000080875	processed_pseudogene	Gm7332	ENSMUST00000118351	processed_pseudogene		5	-1	9261388	454
ENSMUSG00000106980	lincRNA	Gm43690	ENSMUST00000201213	lincRNA		5	-1	150571098	266
ENSMUSG00000035151	protein_coding	Elmod2	ENSMUST00000053902	protein_coding	principal1	8	-1	83332486	4319
ENSMUSG00000097039	lincRNA	Pvt1	ENSMUST00000181416	lincRNA		15	1	62038050	3319
ENSMUSG00000031967	protein_coding	Afg3l1	ENSMUST00000098320	nonsense_mediated_decay		8	1	123477903	4111
ENSMUSG00000097039	lincRNA	Pvt1	ENSMUST00000181657	lincRNA		15	1	62038061	2798
ENSMUSG00000034265	protein_coding	Zdhhc14	ENSMUST00000089185	protein_coding	principal1	17	1	5492557	3078
ENSMUSG00000048391	protein_coding	Olfr843	ENSMUST00000214019	protein_coding	principal1	9	-1	19251977	7499
ENSMUSG00000031967	protein_coding	Afg3l1	ENSMUST00000133606	retained_intron		8	1	123477940	419
ENSMUSG00000019846	protein_coding	Lama4	ENSMUST00000019992	protein_coding	principal1	10	1	38965515	6046
ENSMUSG00000097039	lincRNA	Pvt1	ENSMUST00000183297	lincRNA		15	1	62039257	1052
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000161380	retained_intron		1	1	161035163	600
ENSMUSG00000048391	protein_coding	Olfr843	ENSMUST00000214267	protein_coding	principal1	9	-1	19251987	7071
ENSMUSG00000028952	protein_coding	Zbtb48	ENSMUST00000123696	retained_intron		4	-1	152027671	2709
ENSMUSG00000035151	protein_coding	Elmod2	ENSMUST00000150124	retained_intron		8	-1	83324626	3060
ENSMUSG00000097039	lincRNA	Pvt1	ENSMUST00000183028	lincRNA		15	1	62099029	745
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000162289	retained_intron		1	1	161035163	904
ENSMUSG00000031967	protein_coding	Afg3l1	ENSMUST00000150872	processed_transcript		8	1	123480366	674
ENSMUSG00000035151	protein_coding	Elmod2	ENSMUST00000139041	protein_coding		8	-1	83331454	770
ENSMUSG00000048391	protein_coding	Olfr843	ENSMUST00000061365	protein_coding	principal1	9	-1	19249463	1107
ENSMUSG00000028952	protein_coding	Zbtb48	ENSMUST00000136212	processed_transcript		4	-1	152020616	406
ENSMUSG00000097039	lincRNA	Pvt1	ENSMUST00000182476	lincRNA		15	1	62178175	2172
ENSMUSG00000031502	protein_coding	Col4a1	ENSMUST00000033898	protein_coding	principal1	8	-1	11312826	6615
ENSMUSG00000028952	protein_coding	Zbtb48	ENSMUST00000147895	processed_transcript		4	-1	152022106	502
ENSMUSG00000031967	protein_coding	Afg3l1	ENSMUST00000152469	retained_intron		8	1	123492961	648
ENSMUSG00000097039	lincRNA	Pvt1	ENSMUST00000182380	lincRNA		15	1	62218223	873
ENSMUSG00000097039	lincRNA	Pvt1	ENSMUST00000182141	lincRNA		15	1	62222603	501
ENSMUSG00000035151	protein_coding	Elmod2	ENSMUST00000141565	retained_intron		8	-1	83332404	5122
ENSMUSG00000028952	protein_coding	Zbtb48	ENSMUST00000156748	nonsense_mediated_decay		4	-1	152026444	656
ENSMUSG00000046755	protein_coding	Kif2b	ENSMUST00000061019	protein_coding	principal1	11	-1	91577558	2244
ENSMUSG00000031502	protein_coding	Col4a1	ENSMUST00000209735	nonsense_mediated_decay		8	-1	11312689	6487
ENSMUSG00000035151	protein_coding	Elmod2	ENSMUST00000126079	retained_intron		8	-1	83332404	649
ENSMUSG00000031967	protein_coding	Afg3l1	ENSMUST00000146795	retained_intron		8	1	123501086	449
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000162558	lincRNA		1	1	161035163	502
ENSMUSG00000028952	protein_coding	Zbtb48	ENSMUST00000155441	retained_intron		4	-1	152026047	592
ENSMUSG00000031502	protein_coding	Col4a1	ENSMUST00000209598	protein_coding		8	-1	11210831	1170
ENSMUSG00000081630	processed_pseudogene	Gm11498	ENSMUST00000120660	processed_pseudogene		11	-1	91831390	949
ENSMUSG00000028952	protein_coding	Zbtb48	ENSMUST00000131935	protein_coding		4	-1	152027637	655
ENSMUSG00000095011	protein_coding	Gm20838	ENSMUST00000187712	protein_coding	principal1	Y	-1	33543164	931
ENSMUSG00000095011	protein_coding	Gm20838	ENSMUST00000179884	protein_coding		Y	-1	33541736	498
ENSMUSG00000081363	processed_pseudogene	Gm11500	ENSMUST00000118237	processed_pseudogene		11	-1	92770973	601
ENSMUSG00000035151	protein_coding	Elmod2	ENSMUST00000177594	protein_coding	principal1	8	-1	83332486	4704
ENSMUSG00000031502	protein_coding	Col4a1	ENSMUST00000130488	retained_intron		8	-1	11217269	676
ENSMUSG00000031502	protein_coding	Col4a1	ENSMUST00000209661	nonsense_mediated_decay		8	-1	11241148	618
ENSMUSG00000038760	protein_coding	Trhr	ENSMUST00000038856	protein_coding	principal1	15	1	44196135	3608
ENSMUSG00000030541	protein_coding	Idh2	ENSMUST00000107384	protein_coding	principal1	7	-1	80115392	1745
ENSMUSG00000040998	protein_coding	Npnt	ENSMUST00000042744	protein_coding	alternative2	3	-1	132950291	4619
ENSMUSG00000102544	lincRNA	Gm5103	ENSMUST00000192081	lincRNA		3	1	51378024	1086
ENSMUSG00000048174	protein_coding	Tmem81	ENSMUST00000058167	protein_coding	principal1	1	1	132506230	1742
ENSMUSG00000089926	lincRNA	Gm15734	ENSMUST00000163076	lincRNA		5	-1	9266022	1040
ENSMUSG00000117790	lincRNA	Gm46652	ENSMUST00000236155	lincRNA		19	1	60611287	545
ENSMUSG00000031502	protein_coding	Col4a1	ENSMUST00000208386	processed_transcript		8	-1	11232439	416
ENSMUSG00000040998	protein_coding	Npnt	ENSMUST00000117811	protein_coding	alternative2	3	-1	132950291	4532
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000182120	retained_intron		1	-1	135109436	717
ENSMUSG00000102544	lincRNA	Gm5103	ENSMUST00000195545	lincRNA		3	1	51378076	1087
ENSMUSG00000107848	TEC	Gm44181	ENSMUST00000203106	TEC		6	-1	93455557	483
ENSMUSG00000048174	protein_coding	Tmem81	ENSMUST00000188789	protein_coding	principal1	1	1	132506889	1751
ENSMUSG00000031502	protein_coding	Col4a1	ENSMUST00000208095	protein_coding		8	-1	11279656	545
ENSMUSG00000094064	lincRNA	Gm21626	ENSMUST00000189751	lincRNA		Y	-1	33636197	174
ENSMUSG00000094064	lincRNA	Gm21626	ENSMUST00000177791	lincRNA		Y	-1	33636191	498
ENSMUSG00000031502	protein_coding	Col4a1	ENSMUST00000209000	retained_intron		8	-1	11245605	604
ENSMUSG00000025199	protein_coding	Chuk	ENSMUST00000147423	retained_intron		19	-1	44107469	2337
ENSMUSG00000038760	protein_coding	Trhr	ENSMUST00000226626	nonsense_mediated_decay		15	1	44196233	3494
ENSMUSG00000062397	protein_coding	Zfp706	ENSMUST00000078976	protein_coding	principal1	15	-1	37007402	4417
ENSMUSG00000110636	lincRNA	Gm39397	ENSMUST00000212331	lincRNA		11	1	103421736	228
ENSMUSG00000087226	lincRNA	Gm14015	ENSMUST00000130634	lincRNA		2	-1	106523103	3949
ENSMUSG00000084783	antisense	Gm15419	ENSMUST00000148654	antisense		8	-1	11417892	743
ENSMUSG00000025199	protein_coding	Chuk	ENSMUST00000146861	retained_intron		19	-1	44107282	656
ENSMUSG00000072437	protein_coding	Nanos1	ENSMUST00000088237	protein_coding	principal1	19	1	60755987	3928
ENSMUSG00000038760	protein_coding	Trhr	ENSMUST00000227505	nonsense_mediated_decay		15	1	44196967	468
ENSMUSG00000083581	unprocessed_pseudogene	Gm14186	ENSMUST00000120804	unprocessed_pseudogene		11	-1	99719028	137
ENSMUSG00000099461	lincRNA	Gm28521	ENSMUST00000190230	lincRNA		Y	-1	33679991	437
ENSMUSG00000038760	protein_coding	Trhr	ENSMUST00000110289	protein_coding	principal1	15	1	44196233	1745
ENSMUSG00000078270	processed_pseudogene	Gm14193	ENSMUST00000105067	processed_pseudogene		11	1	99730175	153
ENSMUSG00000062397	protein_coding	Zfp706	ENSMUST00000226257	retained_intron		15	-1	37002035	493
ENSMUSG00000099461	lincRNA	Gm28521	ENSMUST00000188948	lincRNA		Y	-1	33679991	622
ENSMUSG00000029564	protein_coding	4930519G04Rik	ENSMUST00000031547	protein_coding	principal2	5	1	114853664	2092
ENSMUSG00000087225	lincRNA	Gm14014	ENSMUST00000156718	lincRNA		2	-1	106580840	2717
ENSMUSG00000107739	processed_pseudogene	Gm7812	ENSMUST00000203479	processed_pseudogene		6	-1	93650225	874
ENSMUSG00000078269	protein_coding	Gm14180	ENSMUST00000105066	protein_coding	principal1	11	-1	99734290	78
ENSMUSG00000078673	protein_coding	Mup19	ENSMUST00000080606	protein_coding	principal2	4	-1	61782269	927
ENSMUSG00000019846	protein_coding	Lama4	ENSMUST00000162211	retained_intron		10	1	38965553	3164
ENSMUSG00000062397	protein_coding	Zfp706	ENSMUST00000226453	protein_coding	principal1	15	-1	37007015	517
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000159157	retained_intron		1	1	161035166	723
ENSMUSG00000025199	protein_coding	Chuk	ENSMUST00000134495	retained_intron		19	-1	44084450	855
ENSMUSG00000019846	protein_coding	Lama4	ENSMUST00000161303	retained_intron		10	1	38965570	2569
ENSMUSG00000040998	protein_coding	Npnt	ENSMUST00000042729	protein_coding	principal4	3	-1	132950160	3601
ENSMUSG00000078632	protein_coding	Lrrc37a	ENSMUST00000153273	protein_coding	principal1	11	-1	103504597	9931
ENSMUSG00000096532	lincRNA	Gm21633	ENSMUST00000186630	lincRNA		Y	-1	33702863	174
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000160429	retained_intron		1	1	161035166	759
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000159663	lincRNA		1	1	161035166	346
ENSMUSG00000096532	lincRNA	Gm21633	ENSMUST00000178941	lincRNA		Y	-1	33702857	498
ENSMUSG00000025199	protein_coding	Chuk	ENSMUST00000144286	retained_intron		19	-1	44079282	545
ENSMUSG00000078673	protein_coding	Mup19	ENSMUST00000107477	protein_coding	alternative2	4	-1	61782224	720
ENSMUSG00000062397	protein_coding	Zfp706	ENSMUST00000226671	protein_coding	principal1	15	-1	37007773	447
ENSMUSG00000019846	protein_coding	Lama4	ENSMUST00000159580	retained_intron		10	1	38965672	2592
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000161229	retained_intron		1	1	161035166	2556
ENSMUSG00000025199	protein_coding	Chuk	ENSMUST00000123806	retained_intron		19	-1	44079035	737
ENSMUSG00000019846	protein_coding	Lama4	ENSMUST00000161992	retained_intron		10	1	39053805	944
ENSMUSG00000062397	protein_coding	Zfp706	ENSMUST00000228275	protein_coding	principal1	15	-1	37004058	481
ENSMUSG00000082136	processed_pseudogene	Gm15660	ENSMUST00000118997	processed_pseudogene		8	1	83352556	478
ENSMUSG00000029564	protein_coding	4930519G04Rik	ENSMUST00000112153	retained_intron		5	1	114859710	2198
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000145668	processed_transcript		4	1	132639085	3792
ENSMUSG00000048502	protein_coding	Duxbl1	ENSMUST00000172465	processed_transcript		14	1	25978577	365
ENSMUSG00000030541	protein_coding	Idh2	ENSMUST00000134328	nonsense_mediated_decay		7	-1	80115332	1790
ENSMUSG00000019846	protein_coding	Lama4	ENSMUST00000163036	retained_intron		10	1	39105781	511
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000159404	retained_intron		1	1	161035167	539
ENSMUSG00000040998	protein_coding	Npnt	ENSMUST00000117456	protein_coding		3	-1	132949814	3383
ENSMUSG00000025199	protein_coding	Chuk	ENSMUST00000149091	retained_intron		19	-1	44075904	642
ENSMUSG00000097259	antisense	Gm26766	ENSMUST00000181411	antisense		15	1	37007523	3677
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000159438	retained_intron		1	1	161035168	779
ENSMUSG00000030541	protein_coding	Idh2	ENSMUST00000139178	retained_intron		7	-1	80098409	1085
ENSMUSG00000097259	antisense	Gm26766	ENSMUST00000227544	antisense		15	1	37007583	2347
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000065709	retained_intron		1	1	161035172	530
ENSMUSG00000112899	lincRNA	4930521O17Rik	ENSMUST00000219339	lincRNA		10	-1	67973708	491
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000161461	retained_intron		1	1	161035178	793
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000162163	retained_intron		1	1	161035184	1614
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000131252	protein_coding	principal4	19	1	6363690	4353
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000159153	retained_intron		1	1	161035186	872
ENSMUSG00000030541	protein_coding	Idh2	ENSMUST00000156761	retained_intron		7	-1	80096029	485
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000159890	retained_intron		1	1	161035188	1066
ENSMUSG00000029564	protein_coding	4930519G04Rik	ENSMUST00000142582	protein_coding		5	1	114863499	659
ENSMUSG00000030541	protein_coding	Idh2	ENSMUST00000206714	protein_coding		7	-1	80115304	392
ENSMUSG00000107062	processed_pseudogene	Gm43580	ENSMUST00000202892	processed_pseudogene		7	1	128688535	284
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000160497	retained_intron		1	1	161036020	629
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000161623	retained_intron		1	1	161036695	403
ENSMUSG00000040998	protein_coding	Npnt	ENSMUST00000117164	protein_coding	alternative2	3	-1	132950043	1779
ENSMUSG00000029564	protein_coding	4930519G04Rik	ENSMUST00000134389	protein_coding	alternative2	5	1	114865470	731
ENSMUSG00000040998	protein_coding	Npnt	ENSMUST00000093971	protein_coding	alternative2	3	-1	132950043	1830
ENSMUSG00000064213	protein_coding	Defa24	ENSMUST00000080533	protein_coding	principal1	8	1	21734494	419
ENSMUSG00000080912	processed_pseudogene	Gm12269	ENSMUST00000122273	processed_pseudogene		11	-1	61131307	717
ENSMUSG00000030541	protein_coding	Idh2	ENSMUST00000125542	nonsense_mediated_decay		7	-1	80100881	743
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000159399	retained_intron		1	1	161037288	422
ENSMUSG00000040998	protein_coding	Npnt	ENSMUST00000132732	retained_intron		3	-1	132906359	722
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000157029	processed_transcript		4	1	132639079	2320
ENSMUSG00000084007	processed_pseudogene	Gm9003	ENSMUST00000121810	processed_pseudogene		X	-1	94423295	482
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000142301	processed_transcript		4	1	132656700	3540
ENSMUSG00000030541	protein_coding	Idh2	ENSMUST00000134070	retained_intron		7	-1	80099139	891
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000163081	retained_intron		1	1	161037309	370
ENSMUSG00000040033	protein_coding	Stat2	ENSMUST00000085708	protein_coding	principal2	10	1	128270576	4394
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000148728	nonsense_mediated_decay		6	1	86404296	1203
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000127682	processed_transcript		4	1	132639058	703
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000113489	protein_coding	alternative1	19	1	6363719	2863
ENSMUSG00000090607	processed_pseudogene	Gm17052	ENSMUST00000165496	processed_pseudogene		12	1	107419141	289
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000160551	retained_intron		1	1	161037353	549
ENSMUSG00000003604	protein_coding	Aven	ENSMUST00000003705	protein_coding	principal3	2	1	112492964	4735
ENSMUSG00000024989	protein_coding	Cep55	ENSMUST00000236044	protein_coding	alternative2	19	1	38055037	2442
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000159037	retained_intron		1	1	161037718	636
ENSMUSG00000100843	processed_pseudogene	Gm8307	ENSMUST00000187682	processed_pseudogene		1	1	45768337	1150
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000113488	protein_coding	alternative1	19	1	6363810	2282
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000134868	processed_transcript		4	1	132639064	655
ENSMUSG00000053332	processed_transcript	Gas5	ENSMUST00000160516	retained_intron		1	1	161037781	572
ENSMUSG00000084904	lincRNA	Gm14827	ENSMUST00000146644	lincRNA		X	1	94442732	3089
ENSMUSG00000040033	protein_coding	Stat2	ENSMUST00000217852	retained_intron		10	1	128277858	799
ENSMUSG00000003604	protein_coding	Aven	ENSMUST00000127894	processed_transcript		2	1	112559282	616
ENSMUSG00000022321	protein_coding	Cdh10	ENSMUST00000166873	protein_coding	principal1	15	1	18818947	3176
ENSMUSG00000113415	lincRNA	Gm3234	ENSMUST00000223301	lincRNA		12	-1	107484128	3250
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000135299	protein_coding		4	1	132638987	1138
ENSMUSG00000040033	protein_coding	Stat2	ENSMUST00000220142	retained_intron		10	1	128281648	747
ENSMUSG00000113415	lincRNA	Gm3234	ENSMUST00000222644	lincRNA		12	-1	107488583	5061
ENSMUSG00000054156	protein_coding	Gm4894	ENSMUST00000216428	protein_coding	principal1	9	1	49250531	2294
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000142998	processed_transcript		4	1	132639117	752
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000131083	retained_intron		19	1	6363922	489
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000130833	processed_transcript		4	1	132704400	766
ENSMUSG00000054156	protein_coding	Gm4894	ENSMUST00000067007	protein_coding	principal1	9	1	49268572	357
ENSMUSG00000074227	protein_coding	Spint2	ENSMUST00000108236	protein_coding		7	-1	29281910	1211
ENSMUSG00000022321	protein_coding	Cdh10	ENSMUST00000176801	retained_intron		15	1	18818958	3765
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000153809	processed_transcript		4	1	132701021	613
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000134142	retained_intron		6	1	86404304	3856
ENSMUSG00000003604	protein_coding	Aven	ENSMUST00000099588	protein_coding	alternative2	2	1	112559634	791
ENSMUSG00000024989	protein_coding	Cep55	ENSMUST00000096096	protein_coding	alternative2	19	1	38055040	2366
ENSMUSG00000042105	protein_coding	Inpp5f	ENSMUST00000098007	processed_transcript		7	1	128611328	1906
ENSMUSG00000060375	lincRNA	3110018I06Rik	ENSMUST00000082269	lincRNA		12	1	107488632	1005
ENSMUSG00000022321	protein_coding	Cdh10	ENSMUST00000176593	retained_intron		15	1	18818977	3680
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000095752	protein_coding	alternative1	6	1	86404313	3130
ENSMUSG00000039914	protein_coding	Coq10a	ENSMUST00000220027	protein_coding	alternative2	10	-1	128368691	1307
ENSMUSG00000024989	protein_coding	Cep55	ENSMUST00000169673	protein_coding	alternative2	19	1	38055042	2757
ENSMUSG00000035057	protein_coding	Mgat4d	ENSMUST00000038692	protein_coding	principal1	8	1	83348471	1293
ENSMUSG00000118620	unitary_pseudogene	AL627302.1	ENSMUST00000239279	unitary_pseudogene		X	-1	94460139	2099
ENSMUSG00000074227	protein_coding	Spint2	ENSMUST00000098604	protein_coding	principal1	7	-1	29281912	1384
ENSMUSG00000022321	protein_coding	Cdh10	ENSMUST00000040562	protein_coding	principal1	15	1	18820329	3407
ENSMUSG00000024989	protein_coding	Cep55	ENSMUST00000237408	protein_coding	principal3	19	1	38055089	2683
ENSMUSG00000010142	protein_coding	Tnfrsf13b	ENSMUST00000010286	protein_coding	principal1	11	1	61126755	2556
ENSMUSG00000039914	protein_coding	Coq10a	ENSMUST00000043211	protein_coding	principal2	10	-1	128368954	1421
ENSMUSG00000074227	protein_coding	Spint2	ENSMUST00000208585	retained_intron		7	-1	29265190	3252
ENSMUSG00000024989	protein_coding	Cep55	ENSMUST00000116506	protein_coding	principal3	19	1	38055040	1440
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000130967	protein_coding		6	1	86404314	1445
ENSMUSG00000022321	protein_coding	Cdh10	ENSMUST00000176146	nonsense_mediated_decay		15	1	18899589	2230
ENSMUSG00000048502	protein_coding	Duxbl1	ENSMUST00000172667	protein_coding		14	1	25979083	2209
ENSMUSG00000039914	protein_coding	Coq10a	ENSMUST00000220227	protein_coding	alternative2	10	-1	128368997	1434
ENSMUSG00000115644	protein_coding	Vmn1r17	ENSMUST00000228156	protein_coding	alternative2	6	-1	57363727	2090
ENSMUSG00000035057	protein_coding	Mgat4d	ENSMUST00000139692	processed_transcript		8	1	83358026	1690
ENSMUSG00000010142	protein_coding	Tnfrsf13b	ENSMUST00000146033	protein_coding		11	1	61126758	364
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000183317	polymorphic_pseudogene		1	-1	135132594	6108
ENSMUSG00000022321	protein_coding	Cdh10	ENSMUST00000176409	retained_intron		15	1	19006980	1978
ENSMUSG00000039914	protein_coding	Coq10a	ENSMUST00000218507	nonsense_mediated_decay		10	-1	128368094	301
ENSMUSG00000115644	protein_coding	Vmn1r17	ENSMUST00000227186	protein_coding	principal2	6	-1	57363727	2234
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000113487	protein_coding	alternative1	19	1	6363922	2649
ENSMUSG00000010142	protein_coding	Tnfrsf13b	ENSMUST00000139422	protein_coding		11	1	61126789	532
ENSMUSG00000040033	protein_coding	Stat2	ENSMUST00000217727	retained_intron		10	1	128282817	459
ENSMUSG00000115644	protein_coding	Vmn1r17	ENSMUST00000228294	protein_coding	alternative2	6	-1	57363727	2084
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000020197	protein_coding		4	1	132639046	4976
ENSMUSG00000115644	protein_coding	Vmn1r17	ENSMUST00000228342	protein_coding	principal2	6	-1	57363727	2230
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000180250	protein_coding		4	1	132639046	5020
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000182570	processed_transcript		1	-1	135109308	446
ENSMUSG00000039914	protein_coding	Coq10a	ENSMUST00000219934	retained_intron		10	-1	128365404	783
ENSMUSG00000040033	protein_coding	Stat2	ENSMUST00000218862	retained_intron		10	1	128283570	1873
ENSMUSG00000115644	protein_coding	Vmn1r17	ENSMUST00000227966	protein_coding	principal2	6	-1	57361378	912
ENSMUSG00000039914	protein_coding	Coq10a	ENSMUST00000219815	protein_coding		10	-1	128368333	406
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000182012	processed_transcript		1	-1	135109589	241
ENSMUSG00000040033	protein_coding	Stat2	ENSMUST00000220277	retained_intron		10	1	128284107	861
ENSMUSG00000038074	protein_coding	Fkbp14	ENSMUST00000046520	protein_coding	principal1	6	-1	54593177	2694
ENSMUSG00000039914	protein_coding	Coq10a	ENSMUST00000220111	retained_intron		10	-1	128368981	729
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000183089	retained_intron		1	-1	135110464	359
ENSMUSG00000040033	protein_coding	Stat2	ENSMUST00000105238	protein_coding	alternative2	10	1	128270576	4397
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000182718	retained_intron		1	-1	135111546	593
ENSMUSG00000115159	processed_pseudogene	Gm17892	ENSMUST00000226405	processed_pseudogene		15	1	60397297	793
ENSMUSG00000048502	protein_coding	Duxbl1	ENSMUST00000173580	protein_coding		14	1	25979401	956
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000113485	nonsense_mediated_decay		19	1	6363922	3221
ENSMUSG00000028886	protein_coding	Eya3	ENSMUST00000079157	protein_coding		4	1	132639056	5186
ENSMUSG00000048502	protein_coding	Duxbl1	ENSMUST00000173155	protein_coding		14	1	25980039	556
ENSMUSG00000115503	processed_pseudogene	Gm6392	ENSMUST00000227906	processed_pseudogene		15	1	60468124	1354
ENSMUSG00000038074	protein_coding	Fkbp14	ENSMUST00000155047	nonsense_mediated_decay		6	-1	54593148	2754
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000146298	retained_intron		19	1	6363963	869
ENSMUSG00000048502	protein_coding	Duxbl1	ENSMUST00000174383	processed_transcript		14	1	25980373	486
ENSMUSG00000010142	protein_coding	Tnfrsf13b	ENSMUST00000137832	processed_transcript		11	1	61142461	764
ENSMUSG00000083066	processed_pseudogene	Gm12748	ENSMUST00000120763	processed_pseudogene		1	1	63671468	504
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000154438	nonsense_mediated_decay		6	1	86404317	1290
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000144409	nonsense_mediated_decay		19	1	6364194	718
ENSMUSG00000010142	protein_coding	Tnfrsf13b	ENSMUST00000130708	processed_transcript		11	1	61142499	422
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000182541	processed_transcript		1	-1	135132568	404
ENSMUSG00000038074	protein_coding	Fkbp14	ENSMUST00000117375	protein_coding		6	-1	54597308	1830
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000155973	protein_coding		19	1	6364557	1000
ENSMUSG00000050953	protein_coding	Gja1	ENSMUST00000068581	protein_coding	principal1	10	1	56377330	3071
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000182387	retained_intron		1	-1	135128262	375
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000156762	processed_transcript		6	1	86404323	797
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000154260	processed_transcript		19	1	6370119	455
ENSMUSG00000010142	protein_coding	Tnfrsf13b	ENSMUST00000123378	processed_transcript		11	1	61142665	662
ENSMUSG00000038074	protein_coding	Fkbp14	ENSMUST00000123832	retained_intron		6	-1	54586101	865
ENSMUSG00000050953	protein_coding	Gja1	ENSMUST00000218760	retained_intron		10	1	56377332	3419
ENSMUSG00000050856	protein_coding	Atp5k	ENSMUST00000049628	protein_coding	principal1	5	-1	108434448	371
ENSMUSG00000028076	protein_coding	Cd1d1	ENSMUST00000107620	retained_intron		3	-1	86997947	1475
ENSMUSG00000038074	protein_coding	Fkbp14	ENSMUST00000141757	processed_transcript		6	-1	54585852	306
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000183328	processed_transcript		1	-1	135131163	374
ENSMUSG00000044734	protein_coding	Serpinb1a	ENSMUST00000076352	protein_coding	principal1	13	-1	32851185	1918
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000113712	nonsense_mediated_decay		6	1	86404325	4326
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000144239	retained_intron		19	1	6370712	785
ENSMUSG00000050856	protein_coding	Atp5k	ENSMUST00000118632	protein_coding		5	-1	108434448	272
ENSMUSG00000038074	protein_coding	Fkbp14	ENSMUST00000143312	retained_intron		6	-1	54593162	754
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000131677	retained_intron		19	1	6372413	408
ENSMUSG00000032259	protein_coding	Drd2	ENSMUST00000075764	protein_coding	principal1	9	1	49340627	2547
ENSMUSG00000048502	protein_coding	Duxbl1	ENSMUST00000049793	protein_coding	principal1	14	1	25983005	2266
ENSMUSG00000038074	protein_coding	Fkbp14	ENSMUST00000154907	retained_intron		6	-1	54597293	613
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000183212	processed_transcript		1	-1	135132543	362
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000143718	retained_intron		6	1	86404336	1178
ENSMUSG00000050953	protein_coding	Gja1	ENSMUST00000217789	protein_coding		10	1	56377332	421
ENSMUSG00000097993	polymorphic_pseudogene	Ptprv	ENSMUST00000086432	protein_coding	principal1	1	-1	135112306	291
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000125516	protein_coding		19	1	6373621	905
ENSMUSG00000044734	protein_coding	Serpinb1a	ENSMUST00000223016	processed_transcript		13	-1	32845790	427
ENSMUSG00000010142	protein_coding	Tnfrsf13b	ENSMUST00000101103	protein_coding	principal1	11	1	61140835	750
ENSMUSG00000050856	protein_coding	Atp5k	ENSMUST00000123184	retained_intron		5	-1	108434397	563
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000124667	protein_coding		19	1	6374010	755
ENSMUSG00000118609	unprocessed_pseudogene	AL590997.2	ENSMUST00000239317	unprocessed_pseudogene		11	-1	99747551	189
ENSMUSG00000044734	protein_coding	Serpinb1a	ENSMUST00000091668	protein_coding		13	-1	32851167	759
ENSMUSG00000097988	antisense	Gm10535	ENSMUST00000182275	antisense		1	1	135108961	915
ENSMUSG00000050953	protein_coding	Gja1	ENSMUST00000220204	processed_transcript		10	1	56377449	3889
ENSMUSG00000078263	processed_pseudogene	Gm14188	ENSMUST00000105060	processed_pseudogene		11	-1	99764100	168
ENSMUSG00000050953	protein_coding	Gja1	ENSMUST00000220194	protein_coding		10	1	56377545	275
ENSMUSG00000024949	protein_coding	Sf1	ENSMUST00000162237	protein_coding		19	1	6374129	513
ENSMUSG00000044734	protein_coding	Serpinb1a	ENSMUST00000221967	retained_intron		13	-1	32851164	541
ENSMUSG00000049229	protein_coding	Olfr844	ENSMUST00000220268	protein_coding	principal1	9	1	19316347	1686
ENSMUSG00000050953	protein_coding	Gja1	ENSMUST00000218834	protein_coding		10	1	56377545	180
ENSMUSG00000049229	protein_coding	Olfr844	ENSMUST00000054106	protein_coding		9	1	19318536	930
ENSMUSG00000084254	unprocessed_pseudogene	Defa-ps11	ENSMUST00000119719	unprocessed_pseudogene		8	1	21749175	299
ENSMUSG00000050953	protein_coding	Gja1	ENSMUST00000218444	protein_coding		10	1	56378442	251
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000113713	protein_coding	alternative1	6	1	86404336	3108
ENSMUSG00000050953	protein_coding	Gja1	ENSMUST00000220069	protein_coding	principal1	10	1	56379088	3182
ENSMUSG00000063173	protein_coding	Olfr811	ENSMUST00000216283	processed_transcript		10	-1	129804396	1859
ENSMUSG00000117788	processed_pseudogene	Gm5517	ENSMUST00000236375	processed_pseudogene		19	1	28033464	478
ENSMUSG00000089724	protein_coding	Krtap4-8	ENSMUST00000107439	protein_coding	principal1	11	-1	99780704	983
ENSMUSG00000063173	protein_coding	Olfr811	ENSMUST00000217571	protein_coding	principal1	10	-1	129804396	2399
ENSMUSG00000078668	protein_coding	Gm11595	ENSMUST00000107440	protein_coding	principal1	11	-1	99772913	1200
ENSMUSG00000063173	protein_coding	Olfr811	ENSMUST00000215058	protein_coding	principal1	10	-1	129804362	2508
ENSMUSG00000063173	protein_coding	Olfr811	ENSMUST00000076437	protein_coding	principal1	10	-1	129802523	960
ENSMUSG00000091382	protein_coding	Vmn1r18	ENSMUST00000228574	protein_coding	principal1	6	-1	57395783	14315
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000149270	retained_intron		6	1	86404360	864
ENSMUSG00000034239	protein_coding	Gm884	ENSMUST00000059279	protein_coding	principal1	11	-1	103621140	10977
ENSMUSG00000091382	protein_coding	Vmn1r18	ENSMUST00000164732	protein_coding	principal1	6	-1	57390666	1087
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000113708	retained_intron		6	1	86404473	823
ENSMUSG00000079467	antisense	Gm14966	ENSMUST00000129675	antisense		19	-1	6363535	649
ENSMUSG00000017778	protein_coding	Cox7c	ENSMUST00000078764	protein_coding		13	-1	86046460	433
ENSMUSG00000034239	protein_coding	Gm884	ENSMUST00000167262	protein_coding		11	-1	103614739	4576
ENSMUSG00000101084	lincRNA	Gm28228	ENSMUST00000186880	lincRNA		19	1	28088856	632
ENSMUSG00000081676	processed_pseudogene	Gm11643	ENSMUST00000119578	processed_pseudogene		11	-1	103601105	864
ENSMUSG00000117862	processed_pseudogene	Gm35781	ENSMUST00000236360	processed_pseudogene		19	-1	28146303	208
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000136387	retained_intron		6	1	86413827	2024
ENSMUSG00000061614	protein_coding	Olfr845	ENSMUST00000215572	protein_coding	principal1	9	1	19336457	3446
ENSMUSG00000069085	protein_coding	Dytn	ENSMUST00000090313	protein_coding	principal1	1	-1	63686927	2427
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000205024	retained_intron		6	1	86415791	2660
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000147104	processed_transcript		6	1	86419205	706
ENSMUSG00000061614	protein_coding	Olfr845	ENSMUST00000213344	protein_coding	principal1	9	1	19336499	3530
ENSMUSG00000079467	antisense	Gm14966	ENSMUST00000113496	antisense		19	-1	6363759	518
ENSMUSG00000045004	protein_coding	Spata21	ENSMUST00000051907	protein_coding	principal1	4	1	141088333	2526
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000124683	processed_transcript		6	1	86419397	750
ENSMUSG00000115862	lincRNA	Gm41333	ENSMUST00000230029	lincRNA		15	1	62567975	687
ENSMUSG00000017778	protein_coding	Cox7c	ENSMUST00000131011	protein_coding	principal1	13	-1	86046904	540
ENSMUSG00000061614	protein_coding	Olfr845	ENSMUST00000071259	protein_coding	principal1	9	1	19338459	942
ENSMUSG00000028076	protein_coding	Cd1d1	ENSMUST00000063869	protein_coding		3	-1	86999309	1421
ENSMUSG00000106988	processed_pseudogene	Tsg101-ps	ENSMUST00000201023	processed_pseudogene		15	1	62980648	1170
ENSMUSG00000115799	protein_coding	Vmn1r19	ENSMUST00000089830	protein_coding	principal1	6	1	57403780	2255
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000203763	retained_intron		6	1	86419897	759
ENSMUSG00000045004	protein_coding	Spata21	ENSMUST00000181353	retained_intron		4	1	141103985	666
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000123002	retained_intron		6	1	86419929	628
ENSMUSG00000069085	protein_coding	Dytn	ENSMUST00000126954	retained_intron		1	-1	63686910	4719
ENSMUSG00000058773	protein_coding	H1f5	ENSMUST00000080511	protein_coding	principal1	13	-1	21780625	743
ENSMUSG00000031154	protein_coding	Otud5	ENSMUST00000033494	protein_coding	principal3	X	1	7841831	4259
ENSMUSG00000032257	protein_coding	Ankk1	ENSMUST00000034792	protein_coding	principal1	9	-1	49427021	2714
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000126404	retained_intron		6	1	86420256	877
ENSMUSG00000049052	protein_coding	Olfr812	ENSMUST00000205013	protein_coding	principal1	10	-1	129846094	1718
ENSMUSG00000115253	protein_coding	Vmn1r20	ENSMUST00000227909	protein_coding	principal1	6	1	57428930	3709
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000029257	protein_coding	principal1	3	1	35754134	4868
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000203546	retained_intron		6	1	86421981	2654
ENSMUSG00000017778	protein_coding	Cox7c	ENSMUST00000132233	protein_coding		13	-1	86046347	709
ENSMUSG00000115253	protein_coding	Vmn1r20	ENSMUST00000226808	protein_coding	principal1	6	1	57431691	912
ENSMUSG00000031154	protein_coding	Otud5	ENSMUST00000115666	protein_coding	alternative1	X	1	7841856	2471
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000205109	retained_intron		6	1	86423829	716
ENSMUSG00000032257	protein_coding	Ankk1	ENSMUST00000216227	protein_coding		9	-1	49419436	461
ENSMUSG00000017778	protein_coding	Cox7c	ENSMUST00000017922	processed_transcript		13	-1	86046774	315
ENSMUSG00000049052	protein_coding	Olfr812	ENSMUST00000203571	protein_coding	principal1	10	-1	129845997	1232
ENSMUSG00000114920	processed_pseudogene	Gm19097	ENSMUST00000225947	processed_pseudogene		14	-1	61284788	1009
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000152852	retained_intron		6	1	86425001	585
ENSMUSG00000064917	TEC	Gm22574	ENSMUST00000082983	TEC		13	-1	86045048	60
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000199892	protein_coding		3	1	35788115	776
ENSMUSG00000049052	protein_coding	Olfr812	ENSMUST00000057775	protein_coding	principal1	10	-1	129843062	1043
ENSMUSG00000031154	protein_coding	Otud5	ENSMUST00000115667	protein_coding		X	1	7842056	2708
ENSMUSG00000071337	protein_coding	Tia1	ENSMUST00000123267	nonsense_mediated_decay		6	1	86425476	597
ENSMUSG00000079359	processed_pseudogene	Gm9006	ENSMUST00000165520	processed_pseudogene		12	1	107613000	841
ENSMUSG00000051235	protein_coding	Gen1	ENSMUST00000166117	protein_coding	principal1	12	-1	11265766	5268
ENSMUSG00000101972	protein_coding	H3c11	ENSMUST00000189457	protein_coding	principal1	13	-1	21783370	411
ENSMUSG00000030850	protein_coding	Ate1	ENSMUST00000035458	protein_coding	alternative2	7	-1	130519530	4685
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000198599	protein_coding		3	1	35789606	4102
ENSMUSG00000028076	protein_coding	Cd1d1	ENSMUST00000029717	protein_coding	principal1	3	-1	86999441	1946
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000196965	processed_transcript		3	1	35807842	648
ENSMUSG00000058692	protein_coding	Olfr846	ENSMUST00000214810	protein_coding	principal1	9	-1	19364005	4342
ENSMUSG00000085641	lincRNA	4930465M20Rik	ENSMUST00000130564	lincRNA		12	-1	107735488	1446
ENSMUSG00000028076	protein_coding	Cd1d1	ENSMUST00000132131	retained_intron		3	-1	86998954	555
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000197003	retained_intron		3	1	35827050	638
ENSMUSG00000058692	protein_coding	Olfr846	ENSMUST00000078774	protein_coding	principal1	9	-1	19361356	942
ENSMUSG00000085641	lincRNA	4930465M20Rik	ENSMUST00000144556	lincRNA		12	-1	107735496	541
ENSMUSG00000085589	antisense	A430078I02Rik	ENSMUST00000129343	antisense		6	-1	86480770	2427
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000196409	retained_intron		3	1	35838721	1918
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000211902	nonsense_mediated_decay		3	1	35839049	509
ENSMUSG00000112388	antisense	AI463170	ENSMUST00000219353	antisense		12	-1	76547815	430
ENSMUSG00000028076	protein_coding	Cd1d1	ENSMUST00000142793	retained_intron		3	-1	86999341	667
ENSMUSG00000086975	lincRNA	Gm15208	ENSMUST00000134448	lincRNA		12	-1	107784041	493
ENSMUSG00000051235	protein_coding	Gen1	ENSMUST00000218547	nonsense_mediated_decay		12	-1	11265766	4198
ENSMUSG00000001175	protein_coding	Calm1	ENSMUST00000110082	protein_coding	principal1	12	1	100199435	4115
ENSMUSG00000112388	antisense	AI463170	ENSMUST00000220157	antisense		12	-1	76547852	447
ENSMUSG00000031154	protein_coding	Otud5	ENSMUST00000115668	protein_coding		X	1	7842082	2543
ENSMUSG00000112388	antisense	AI463170	ENSMUST00000217839	antisense		12	-1	76547943	970
ENSMUSG00000085589	antisense	A430078I02Rik	ENSMUST00000154066	antisense		6	-1	86480830	2233
ENSMUSG00000037166	protein_coding	Ppp1r14a	ENSMUST00000207714	protein_coding		7	1	29289308	755
ENSMUSG00000037400	protein_coding	Atp11b	ENSMUST00000197764	protein_coding		3	1	35839054	621
ENSMUSG00000112388	antisense	AI463170	ENSMUST00000218453	antisense		12	-1	76547890	558
ENSMUSG00000051235	protein_coding	Gen1	ENSMUST00000218487	protein_coding		12	-1	11265797	2462
ENSMUSG00000028950	protein_coding	Tas1r1	ENSMUST00000030792	protein_coding	principal1	4	-1	152038568	2863
ENSMUSG00000073117	protein_coding	Gm7347	ENSMUST00000095004	protein_coding	principal1	5	-1	26058581	2995
ENSMUSG00000031154	protein_coding	Otud5	ENSMUST00000115665	protein_coding		X	1	7842116	3821
ENSMUSG00000104897	TEC	Gm43203	ENSMUST00000200130	TEC		3	1	35845342	558
ENSMUSG00000079083	protein_coding	Jrkl	ENSMUST00000110582	protein_coding	principal1	9	-1	13245829	3223
ENSMUSG00000052609	protein_coding	Plekhg3	ENSMUST00000217730	protein_coding		12	1	76530891	449
ENSMUSG00000083386	processed_pseudogene	Gm15426	ENSMUST00000117823	processed_pseudogene		17	-1	8765927	556
ENSMUSG00000051235	protein_coding	Gen1	ENSMUST00000220261	retained_intron		12	-1	11250853	2488
ENSMUSG00000051235	protein_coding	Gen1	ENSMUST00000218262	processed_transcript		12	-1	11265791	382
ENSMUSG00000037166	protein_coding	Ppp1r14a	ENSMUST00000048187	protein_coding	principal1	7	1	29289312	950
ENSMUSG00000001175	protein_coding	Calm1	ENSMUST00000153524	retained_intron		12	1	100199529	582
ENSMUSG00000115504	lincRNA	Gm48946	ENSMUST00000226738	lincRNA		15	1	60670343	603
ENSMUSG00000051235	protein_coding	Gen1	ENSMUST00000218259	nonsense_mediated_decay		12	-1	11265788	599
ENSMUSG00000118523	transcribed_unitary_pseudogene	AC158912.1	ENSMUST00000239160	processed_transcript		5	1	108434470	463
ENSMUSG00000103617	antisense	Gm37950	ENSMUST00000191616	antisense		1	1	172237291	364
ENSMUSG00000103966	TEC	Gm37120	ENSMUST00000193350	TEC		1	1	132102365	5959
ENSMUSG00000051235	protein_coding	Gen1	ENSMUST00000219600	protein_coding		12	-1	11265782	430
ENSMUSG00000118523	transcribed_unitary_pseudogene	AC158912.1	ENSMUST00000238796	transcribed_unitary_pseudogene		5	1	108437946	399
ENSMUSG00000118070	bidirectional_promoter_lncRNA	Gm50209	ENSMUST00000235737	bidirectional_promoter_lncRNA		18	1	80468857	1290
ENSMUSG00000093398	unprocessed_pseudogene	Vmn1r-ps11	ENSMUST00000176097	unprocessed_pseudogene		6	-1	57448208	853
ENSMUSG00000001175	protein_coding	Calm1	ENSMUST00000001204	protein_coding		12	1	100200144	3987
ENSMUSG00000051235	protein_coding	Gen1	ENSMUST00000219537	retained_intron		12	-1	11265801	629
ENSMUSG00000031154	protein_coding	Otud5	ENSMUST00000150644	retained_intron		X	1	7842605	2233
ENSMUSG00000081592	processed_pseudogene	Gm11936	ENSMUST00000118323	processed_pseudogene		4	-1	32656088	160
ENSMUSG00000043467	protein_coding	Zbtb37	ENSMUST00000162226	protein_coding	principal1	1	-1	161034849	18814
ENSMUSG00000062866	protein_coding	Phactr2	ENSMUST00000105545	protein_coding	alternative2	10	-1	13474412	8556
ENSMUSG00000031154	protein_coding	Otud5	ENSMUST00000130908	retained_intron		X	1	7842606	563
ENSMUSG00000101852	unprocessed_pseudogene	Gm20886	ENSMUST00000187173	unprocessed_pseudogene		Y	-1	70706829	693
ENSMUSG00000031154	protein_coding	Otud5	ENSMUST00000148841	retained_intron		X	1	7855727	722
ENSMUSG00000017007	protein_coding	Rbpjl	ENSMUST00000137427	retained_intron		2	1	164403141	4908
ENSMUSG00000001175	protein_coding	Calm1	ENSMUST00000127300	retained_intron		12	1	100205403	549
ENSMUSG00000112833	lincRNA	Gm36595	ENSMUST00000218830	lincRNA		10	1	56431981	2006
ENSMUSG00000036769	protein_coding	Wdr44	ENSMUST00000035766	protein_coding	principal1	X	1	23693051	4167
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000088010	protein_coding	principal2	5	-1	31180144	4552
ENSMUSG00000030850	protein_coding	Ate1	ENSMUST00000033139	protein_coding	principal4	7	-1	130519580	4735
ENSMUSG00000099438	unprocessed_pseudogene	Gm21808	ENSMUST00000185495	unprocessed_pseudogene		Y	-1	70781401	696
ENSMUSG00000085218	processed_transcript	BB218582	ENSMUST00000123623	processed_transcript		2	-1	106650364	1024
ENSMUSG00000108909	processed_pseudogene	Gm9373	ENSMUST00000208724	processed_pseudogene		7	1	58951578	599
ENSMUSG00000112175	lincRNA	4930452L12Rik	ENSMUST00000220158	lincRNA		10	-1	56437603	785
ENSMUSG00000036769	protein_coding	Wdr44	ENSMUST00000142600	retained_intron		X	1	23693077	2291
ENSMUSG00000085218	processed_transcript	BB218582	ENSMUST00000139514	processed_transcript		2	-1	106650334	545
ENSMUSG00000030850	protein_coding	Ate1	ENSMUST00000208116	retained_intron		7	-1	130418790	735
ENSMUSG00000109221	processed_pseudogene	Gm9375	ENSMUST00000208899	processed_pseudogene		7	1	58970237	903
ENSMUSG00000030850	protein_coding	Ate1	ENSMUST00000207041	protein_coding		7	-1	130507497	758
ENSMUSG00000043467	protein_coding	Zbtb37	ENSMUST00000163079	nonsense_mediated_decay		1	-1	161034849	3084
ENSMUSG00000092564	bidirectional_promoter_lncRNA	BC051226	ENSMUST00000172526	bidirectional_promoter_lncRNA		17	-1	33909178	978
ENSMUSG00000085881	processed_transcript	Gm15912	ENSMUST00000222385	retained_intron		13	-1	74009216	1208
ENSMUSG00000085218	processed_transcript	BB218582	ENSMUST00000135180	processed_transcript		2	-1	106643388	314
ENSMUSG00000092090	lincRNA	Gm3294	ENSMUST00000164104	lincRNA		6	1	28981634	7367
ENSMUSG00000092564	bidirectional_promoter_lncRNA	BC051226	ENSMUST00000174467	bidirectional_promoter_lncRNA		17	-1	33909209	462
ENSMUSG00000043467	protein_coding	Zbtb37	ENSMUST00000160056	nonsense_mediated_decay		1	-1	161034834	2929
ENSMUSG00000029359	protein_coding	Tesc	ENSMUST00000031304	protein_coding	principal1	5	1	118027743	1031
ENSMUSG00000085881	processed_transcript	Gm15912	ENSMUST00000128914	lincRNA		13	-1	74009354	578
ENSMUSG00000092564	bidirectional_promoter_lncRNA	BC051226	ENSMUST00000174321	bidirectional_promoter_lncRNA		17	-1	33909317	430
ENSMUSG00000116822	TEC	Gm41504	ENSMUST00000232250	TEC		16	-1	94713903	1345
ENSMUSG00000043467	protein_coding	Zbtb37	ENSMUST00000159250	protein_coding	principal1	1	-1	161034848	2473
ENSMUSG00000108838	processed_pseudogene	Gm45189	ENSMUST00000208567	processed_pseudogene		7	1	59109139	363
ENSMUSG00000066760	protein_coding	Psg16	ENSMUST00000071399	protein_coding	alternative2	7	1	17074040	4421
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000202639	protein_coding	alternative2	5	-1	31180117	4200
ENSMUSG00000043467	protein_coding	Zbtb37	ENSMUST00000171748	protein_coding		1	-1	161034284	2141
ENSMUSG00000030850	protein_coding	Ate1	ENSMUST00000216011	protein_coding	alternative2	7	-1	130519461	1680
ENSMUSG00000062866	protein_coding	Phactr2	ENSMUST00000105543	protein_coding	principal2	10	-1	13324289	2735
ENSMUSG00000062866	protein_coding	Phactr2	ENSMUST00000105546	protein_coding	alternative2	10	-1	13388753	2808
ENSMUSG00000062866	protein_coding	Phactr2	ENSMUST00000079698	protein_coding	alternative2	10	-1	13388970	1934
ENSMUSG00000043467	protein_coding	Zbtb37	ENSMUST00000177003	protein_coding		1	-1	161034816	363
ENSMUSG00000030850	protein_coding	Ate1	ENSMUST00000178534	protein_coding	alternative2	7	-1	130519961	1530
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000201423	retained_intron		5	-1	31159381	906
ENSMUSG00000029359	protein_coding	Tesc	ENSMUST00000124648	nonsense_mediated_decay		5	1	118027765	981
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000201087	retained_intron		5	-1	31166132	581
ENSMUSG00000062866	protein_coding	Phactr2	ENSMUST00000154265	retained_intron		10	-1	13388731	2431
ENSMUSG00000066760	protein_coding	Psg16	ENSMUST00000118367	protein_coding	principal3	7	1	17074041	2282
ENSMUSG00000110420	processed_pseudogene	Gm45870	ENSMUST00000211269	processed_pseudogene		7	1	11314461	601
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000202843	retained_intron		5	-1	31179909	2328
ENSMUSG00000036769	protein_coding	Wdr44	ENSMUST00000101670	protein_coding	principal1	X	1	23693096	4002
ENSMUSG00000102077	unprocessed_pseudogene	Gm29001	ENSMUST00000186177	unprocessed_pseudogene		Y	-1	66807260	697
ENSMUSG00000030850	protein_coding	Ate1	ENSMUST00000094017	protein_coding	alternative2	7	-1	130520369	1938
ENSMUSG00000066760	protein_coding	Psg16	ENSMUST00000131153	retained_intron		7	1	17074118	600
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000202218	retained_intron		5	-1	31179911	982
ENSMUSG00000043467	protein_coding	Zbtb37	ENSMUST00000172044	protein_coding	principal1	1	-1	161034259	3883
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000200871	protein_coding		5	-1	31174501	318
ENSMUSG00000087316	lincRNA	Gm11917	ENSMUST00000154813	lincRNA		4	1	29068079	373
ENSMUSG00000109979	processed_pseudogene	Gm45596	ENSMUST00000209279	processed_pseudogene		7	1	11367374	434
ENSMUSG00000036769	protein_coding	Wdr44	ENSMUST00000135445	retained_intron		X	1	23776819	2723
ENSMUSG00000116641	antisense	Gm41505	ENSMUST00000232585	antisense		16	1	94721894	1200
ENSMUSG00000104016	antisense	Gm37362	ENSMUST00000194567	antisense		1	1	161030582	634
ENSMUSG00000108112	processed_transcript	Gm45193	ENSMUST00000204686	processed_transcript		6	1	57485121	1552
ENSMUSG00000099852	unprocessed_pseudogene	Gm29002	ENSMUST00000188301	unprocessed_pseudogene		Y	-1	66971818	696
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000201468	protein_coding		5	-1	31179911	735
ENSMUSG00000103222	TEC	Gm37729	ENSMUST00000194761	TEC		1	1	160985758	1172
ENSMUSG00000036769	protein_coding	Wdr44	ENSMUST00000149483	nonsense_mediated_decay		X	1	23693159	1046
ENSMUSG00000115376	lincRNA	Gm35766	ENSMUST00000228915	lincRNA		14	1	48636141	797
ENSMUSG00000086339	lincRNA	Gm11916	ENSMUST00000132759	lincRNA		4	1	29090605	650
ENSMUSG00000066760	protein_coding	Psg16	ENSMUST00000152671	protein_coding		7	1	17087934	973
ENSMUSG00000115376	lincRNA	Gm35766	ENSMUST00000227367	lincRNA		14	1	48636329	1639
ENSMUSG00000058638	protein_coding	Zfp110	ENSMUST00000004614	protein_coding	principal1	7	1	12834761	3591
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000201428	protein_coding		5	-1	31179849	755
ENSMUSG00000031503	protein_coding	Col4a2	ENSMUST00000033899	protein_coding	principal1	8	1	11312805	6450
ENSMUSG00000030850	protein_coding	Ate1	ENSMUST00000207141	nonsense_mediated_decay		7	-1	130519510	443
ENSMUSG00000029359	protein_coding	Tesc	ENSMUST00000135540	retained_intron		5	1	118027870	994
ENSMUSG00000115669	lincRNA	Gm49151	ENSMUST00000228502	lincRNA		14	1	48643461	704
ENSMUSG00000109340	processed_pseudogene	Gm44548	ENSMUST00000208929	processed_pseudogene		7	-1	131932654	192
ENSMUSG00000108561	processed_pseudogene	Gm45219	ENSMUST00000205602	processed_pseudogene		7	-1	17078655	465
ENSMUSG00000080911	processed_pseudogene	Gm11918	ENSMUST00000121660	processed_pseudogene		4	1	29125946	179
ENSMUSG00000016520	protein_coding	Lnx2	ENSMUST00000016664	protein_coding	principal1	5	-1	147076586	4557
ENSMUSG00000106864	protein_coding	Gtf3c2	ENSMUST00000202300	protein_coding		5	-1	31174821	759
ENSMUSG00000029359	protein_coding	Tesc	ENSMUST00000151792	processed_transcript		5	1	118036031	785
ENSMUSG00000029359	protein_coding	Tesc	ENSMUST00000148777	processed_transcript		5	1	118041316	369
ENSMUSG00000029359	protein_coding	Tesc	ENSMUST00000145526	processed_transcript		5	1	118041317	428
ENSMUSG00000016520	protein_coding	Lnx2	ENSMUST00000123092	processed_transcript		5	-1	147019035	691
ENSMUSG00000058638	protein_coding	Zfp110	ENSMUST00000154011	processed_transcript		7	1	12834816	570
ENSMUSG00000095302	protein_coding	Ssty2	ENSMUST00000190565	protein_coding	principal1	Y	-1	67048072	1216
ENSMUSG00000101678	protein_coding	Gm29609	ENSMUST00000136581	processed_transcript		5	-1	31158153	513
ENSMUSG00000095302	protein_coding	Ssty2	ENSMUST00000179136	protein_coding	principal1	Y	-1	67046566	684
ENSMUSG00000031503	protein_coding	Col4a2	ENSMUST00000145295	retained_intron		8	1	11404908	921
ENSMUSG00000069309	protein_coding	Hist1h2an	ENSMUST00000091751	protein_coding	principal1	13	-1	21787218	393
ENSMUSG00000058638	protein_coding	Zfp110	ENSMUST00000148041	retained_intron		7	1	12835037	603
ENSMUSG00000058638	protein_coding	Zfp110	ENSMUST00000137718	retained_intron		7	1	12836291	828
ENSMUSG00000031503	protein_coding	Col4a2	ENSMUST00000146219	retained_intron		8	1	11441109	764
ENSMUSG00000029490	protein_coding	Mfsd7a	ENSMUST00000031455	protein_coding	principal1	5	-1	108449100	2717
ENSMUSG00000058638	protein_coding	Zfp110	ENSMUST00000168247	protein_coding	principal1	7	1	12835483	2499
ENSMUSG00000105422	processed_pseudogene	Gm6089	ENSMUST00000197666	processed_pseudogene		5	1	26070537	938
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000102683	protein_coding	principal3	11	-1	60352905	4999
ENSMUSG00000110215	transcribed_unprocessed_pseudogene	Gm45598	ENSMUST00000210719	transcribed_unprocessed_pseudogene		7	-1	11387584	986
ENSMUSG00000085573	antisense	Gm15418	ENSMUST00000151014	antisense		8	1	11187755	677
ENSMUSG00000110215	transcribed_unprocessed_pseudogene	Gm45598	ENSMUST00000209832	processed_transcript		7	-1	11385518	2263
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000093048	protein_coding		11	-1	60352905	4864
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000093046	protein_coding		11	-1	60352905	4849
ENSMUSG00000037636	protein_coding	Slc25a43	ENSMUST00000047655	protein_coding	principal1	X	1	36743659	1111
ENSMUSG00000082486	processed_pseudogene	Gm11919	ENSMUST00000117609	processed_pseudogene		4	1	29195520	721
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000151284	processed_transcript		11	-1	60231347	886
ENSMUSG00000110005	processed_pseudogene	Gm18123	ENSMUST00000210874	processed_pseudogene		7	-1	11394125	822
ENSMUSG00000042050	protein_coding	Wdr60	ENSMUST00000221748	retained_intron		12	-1	116213870	2067
ENSMUSG00000082058	processed_pseudogene	Gm11923	ENSMUST00000118135	processed_pseudogene		4	1	29490156	508
ENSMUSG00000037826	protein_coding	Ppm1k	ENSMUST00000042766	protein_coding	principal1	6	-1	57535426	5560
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000133420	protein_coding		11	-1	60245157	790
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000143124	protein_coding		11	-1	60245669	729
ENSMUSG00000101678	protein_coding	Gm29609	ENSMUST00000101411	protein_coding	principal1	5	-1	31179911	3223
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000064019	protein_coding		11	-1	60352905	2151
ENSMUSG00000037636	protein_coding	Slc25a43	ENSMUST00000133699	processed_transcript		X	1	36743711	1285
ENSMUSG00000037826	protein_coding	Ppm1k	ENSMUST00000204607	protein_coding		6	-1	57515607	640
ENSMUSG00000029490	protein_coding	Mfsd7a	ENSMUST00000238510	nonsense_mediated_decay		5	-1	108448876	2111
ENSMUSG00000037826	protein_coding	Ppm1k	ENSMUST00000203713	processed_transcript		6	-1	57535468	264
ENSMUSG00000029490	protein_coding	Mfsd7a	ENSMUST00000238429	processed_transcript		5	-1	108443495	720
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000102682	protein_coding		11	-1	60352905	2256
ENSMUSG00000093535	antisense	4930533I22Rik	ENSMUST00000176290	antisense		6	1	57476697	2564
ENSMUSG00000029490	protein_coding	Mfsd7a	ENSMUST00000238630	retained_intron		5	-1	108448900	4591
ENSMUSG00000098152	processed_pseudogene	Gm27025	ENSMUST00000182392	processed_pseudogene		13	1	86235827	942
ENSMUSG00000007107	protein_coding	Atp1a4	ENSMUST00000111243	protein_coding	principal1	1	-1	172258414	3470
ENSMUSG00000035517	protein_coding	Tdrd7	ENSMUST00000107777	protein_coding	alternative2	4	1	45965334	3655
ENSMUSG00000114856	processed_pseudogene	Gm47642	ENSMUST00000224195	processed_pseudogene		13	-1	87234594	156
ENSMUSG00000114750	processed_pseudogene	Gm18265	ENSMUST00000225883	processed_pseudogene		13	1	87307726	799
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000172628	protein_coding		8	1	121949750	849
ENSMUSG00000042492	protein_coding	Tbc1d10b	ENSMUST00000120705	protein_coding	principal1	7	-1	127208468	3614
ENSMUSG00000064140	protein_coding	Trim38	ENSMUST00000226039	protein_coding	principal1	13	1	23769913	1999
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000142225	processed_transcript		11	-1	60352905	3013
ENSMUSG00000017007	protein_coding	Rbpjl	ENSMUST00000017151	protein_coding	principal1	2	1	164403194	2456
ENSMUSG00000007107	protein_coding	Atp1a4	ENSMUST00000193316	processed_transcript		1	-1	172253967	322
ENSMUSG00000108757	lincRNA	Gm45202	ENSMUST00000205955	lincRNA		7	1	80155169	332
ENSMUSG00000033323	protein_coding	Ctdp1	ENSMUST00000036229	protein_coding	principal1	18	-1	80469695	3713
ENSMUSG00000000538	protein_coding	Tom1l2	ENSMUST00000095254	protein_coding	alternative1	11	-1	60352905	4940
ENSMUSG00000098011	processed_pseudogene	Gm21232	ENSMUST00000182187	processed_pseudogene		13	1	87782971	1006
ENSMUSG00000020945	protein_coding	Lyzl6	ENSMUST00000107014	protein_coding	principal1	11	-1	103638879	802
ENSMUSG00000042492	protein_coding	Tbc1d10b	ENSMUST00000205620	protein_coding		7	-1	127203753	1055
ENSMUSG00000064140	protein_coding	Trim38	ENSMUST00000223911	nonsense_mediated_decay		13	1	23782541	1457
ENSMUSG00000064140	protein_coding	Trim38	ENSMUST00000074067	protein_coding	principal1	13	1	23782541	1480
ENSMUSG00000042492	protein_coding	Tbc1d10b	ENSMUST00000153857	retained_intron		7	-1	127199985	564
ENSMUSG00000043301	protein_coding	Kcnj6	ENSMUST00000095873	protein_coding		16	-1	94997655	2362
ENSMUSG00000035517	protein_coding	Tdrd7	ENSMUST00000102929	protein_coding	principal3	4	1	45972233	3716
ENSMUSG00000033323	protein_coding	Ctdp1	ENSMUST00000160434	protein_coding		18	-1	80440788	1334
ENSMUSG00000033323	protein_coding	Ctdp1	ENSMUST00000161003	protein_coding		18	-1	80440859	1199
ENSMUSG00000020945	protein_coding	Lyzl6	ENSMUST00000021328	protein_coding	principal1	11	-1	103638890	900
ENSMUSG00000031883	protein_coding	Car7	ENSMUST00000212942	retained_intron		8	1	104534689	1702
ENSMUSG00000017007	protein_coding	Rbpjl	ENSMUST00000109356	processed_transcript		2	1	164403209	1220
ENSMUSG00000035517	protein_coding	Tdrd7	ENSMUST00000151422	processed_transcript		4	1	45972834	260
ENSMUSG00000005225	protein_coding	Plekha8	ENSMUST00000119706	protein_coding	principal1	6	1	54595111	6739
ENSMUSG00000035517	protein_coding	Tdrd7	ENSMUST00000140270	processed_transcript		4	1	45990163	618
ENSMUSG00000035517	protein_coding	Tdrd7	ENSMUST00000155936	processed_transcript		4	1	46026101	525
ENSMUSG00000042492	protein_coding	Tbc1d10b	ENSMUST00000124240	processed_transcript		7	-1	127207747	704
ENSMUSG00000020945	protein_coding	Lyzl6	ENSMUST00000140430	processed_transcript		11	-1	103635021	512
ENSMUSG00000040548	protein_coding	Tex2	ENSMUST00000042780	protein_coding	principal2	11	-1	106612930	4934
ENSMUSG00000042492	protein_coding	Tbc1d10b	ENSMUST00000137987	retained_intron		7	-1	127200954	837
ENSMUSG00000043301	protein_coding	Kcnj6	ENSMUST00000099508	protein_coding	principal1	16	-1	94997696	3097
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000173931	nonsense_mediated_decay		17	1	33524204	4121
ENSMUSG00000042492	protein_coding	Tbc1d10b	ENSMUST00000147520	retained_intron		7	-1	127203653	624
ENSMUSG00000042492	protein_coding	Tbc1d10b	ENSMUST00000138219	retained_intron		7	-1	127203694	575
ENSMUSG00000115164	lincRNA	Gm30159	ENSMUST00000229781	lincRNA		15	-1	63140513	1258
ENSMUSG00000040548	protein_coding	Tex2	ENSMUST00000207249	protein_coding		11	-1	106567110	3092
ENSMUSG00000115164	lincRNA	Gm30159	ENSMUST00000229281	lincRNA		15	-1	63140450	582
ENSMUSG00000044748	protein_coding	Defb1	ENSMUST00000051017	protein_coding	principal1	8	1	21776599	872
ENSMUSG00000115164	lincRNA	Gm30159	ENSMUST00000230084	lincRNA		15	-1	63140407	487
ENSMUSG00000005225	protein_coding	Plekha8	ENSMUST00000101385	protein_coding		6	1	54603147	1838
ENSMUSG00000016319	protein_coding	Slc25a5	ENSMUST00000016463	protein_coding	principal1	X	1	36795651	1240
ENSMUSG00000042492	protein_coding	Tbc1d10b	ENSMUST00000133666	retained_intron		7	-1	127203474	427
ENSMUSG00000040548	protein_coding	Tex2	ENSMUST00000103070	protein_coding	alternative2	11	-1	106579113	2645
ENSMUSG00000043301	protein_coding	Kcnj6	ENSMUST00000232562	protein_coding		16	-1	94856672	2275
ENSMUSG00000052609	protein_coding	Plekhg3	ENSMUST00000075249	protein_coding	principal2	12	1	76533380	5138
ENSMUSG00000115164	lincRNA	Gm30159	ENSMUST00000227678	lincRNA		15	-1	63143105	3532
ENSMUSG00000082698	processed_pseudogene	Gm15316	ENSMUST00000121082	processed_pseudogene		8	-1	21817384	421
ENSMUSG00000016319	protein_coding	Slc25a5	ENSMUST00000126608	retained_intron		X	1	36795654	989
ENSMUSG00000040548	protein_coding	Tex2	ENSMUST00000128933	protein_coding		11	-1	106613423	739
ENSMUSG00000043301	protein_coding	Kcnj6	ENSMUST00000165538	protein_coding		16	-1	94856680	3627
ENSMUSG00000070044	protein_coding	Fam149a	ENSMUST00000135912	protein_coding		8	-1	45358865	4815
ENSMUSG00000086675	antisense	Plxna4os2	ENSMUST00000152538	antisense		6	1	32451170	2044
ENSMUSG00000016319	protein_coding	Slc25a5	ENSMUST00000156672	retained_intron		X	1	36797279	765
ENSMUSG00000040548	protein_coding	Tex2	ENSMUST00000153870	protein_coding		11	-1	106580600	464
ENSMUSG00000086720	antisense	Plxna4os3	ENSMUST00000127668	antisense		6	1	32303829	269
ENSMUSG00000084990	antisense	Gm14549	ENSMUST00000154993	antisense		X	1	36814771	1035
ENSMUSG00000051502	protein_coding	Ufsp1	ENSMUST00000052825	protein_coding	principal1	5	1	137294629	1037
ENSMUSG00000042105	protein_coding	Inpp5f	ENSMUST00000043138	protein_coding	principal1	7	1	128611360	4734
ENSMUSG00000110527	processed_pseudogene	Gm7751	ENSMUST00000212868	processed_pseudogene		9	1	19364855	709
ENSMUSG00000086720	antisense	Plxna4os3	ENSMUST00000143328	antisense		6	1	32303913	277
ENSMUSG00000051502	protein_coding	Ufsp1	ENSMUST00000238804	protein_coding		5	1	137295042	402
ENSMUSG00000058568	protein_coding	Defb50	ENSMUST00000078879	protein_coding	principal1	8	1	21823539	373
ENSMUSG00000043301	protein_coding	Kcnj6	ENSMUST00000232403	retained_intron		16	-1	94997583	1936
ENSMUSG00000042105	protein_coding	Inpp5f	ENSMUST00000129085	retained_intron		7	1	128659008	3126
ENSMUSG00000043939	protein_coding	A530064D06Rik	ENSMUST00000232817	nonsense_mediated_decay		17	-1	48167217	4337
ENSMUSG00000042105	protein_coding	Inpp5f	ENSMUST00000148815	processed_transcript		7	1	128663680	684
ENSMUSG00000043301	protein_coding	Kcnj6	ENSMUST00000232128	retained_intron		16	-1	94997701	2163
ENSMUSG00000043301	protein_coding	Kcnj6	ENSMUST00000231744	processed_transcript		16	-1	94997252	631
ENSMUSG00000078262	protein_coding	Krtap4-9	ENSMUST00000105059	protein_coding	principal1	11	1	99785200	1059
ENSMUSG00000042050	protein_coding	Wdr60	ENSMUST00000039349	protein_coding	principal1	12	-1	116263022	3721
ENSMUSG00000053024	protein_coding	Cntn2	ENSMUST00000189528	nonsense_mediated_decay		1	-1	132515637	2836
ENSMUSG00000095873	unprocessed_pseudogene	Ang-ps3	ENSMUST00000177964	unprocessed_pseudogene		14	1	43912992	433
ENSMUSG00000042105	protein_coding	Inpp5f	ENSMUST00000130789	retained_intron		7	1	128667691	468
ENSMUSG00000043939	protein_coding	A530064D06Rik	ENSMUST00000053612	protein_coding	principal3	17	-1	48167217	1859
ENSMUSG00000097715	transcribed_unprocessed_pseudogene	Gpr137b-ps	ENSMUST00000220758	processed_transcript		13	-1	12650388	1942
ENSMUSG00000097715	transcribed_unprocessed_pseudogene	Gpr137b-ps	ENSMUST00000223404	processed_transcript		13	-1	12619849	697
ENSMUSG00000052609	protein_coding	Plekhg3	ENSMUST00000218461	retained_intron		12	1	76533560	3434
ENSMUSG00000106927	lincRNA	Gm43598	ENSMUST00000202482	lincRNA		5	-1	150599540	2479
ENSMUSG00000070044	protein_coding	Fam149a	ENSMUST00000093526	protein_coding	principal1	8	-1	45382291	5469
ENSMUSG00000097715	transcribed_unprocessed_pseudogene	Gpr137b-ps	ENSMUST00000222019	processed_transcript		13	-1	12623970	761
ENSMUSG00000052609	protein_coding	Plekhg3	ENSMUST00000219063	protein_coding	alternative2	12	1	76533620	4535
ENSMUSG00000097715	transcribed_unprocessed_pseudogene	Gpr137b-ps	ENSMUST00000220647	transcribed_unprocessed_pseudogene		13	-1	12650286	1159
ENSMUSG00000078261	protein_coding	Gm11596	ENSMUST00000105058	protein_coding	principal1	11	-1	99793467	1079
ENSMUSG00000090166	protein_coding	Ear10	ENSMUST00000159175	protein_coding	principal1	14	-1	43923559	678
ENSMUSG00000042050	protein_coding	Wdr60	ENSMUST00000222764	retained_intron		12	-1	116231897	1747
ENSMUSG00000052609	protein_coding	Plekhg3	ENSMUST00000218380	protein_coding		12	1	76547025	474
ENSMUSG00000097715	transcribed_unprocessed_pseudogene	Gpr137b-ps	ENSMUST00000223146	retained_intron		13	-1	12617825	730
ENSMUSG00000042050	protein_coding	Wdr60	ENSMUST00000222539	retained_intron		12	-1	116214205	732
ENSMUSG00000030965	protein_coding	Abraxas2	ENSMUST00000084497	protein_coding	principal1	7	1	132859225	2892
ENSMUSG00000090166	protein_coding	Ear10	ENSMUST00000163652	protein_coding	principal1	14	-1	43923368	471
ENSMUSG00000070044	protein_coding	Fam149a	ENSMUST00000155230	protein_coding		8	-1	45358762	2661
ENSMUSG00000078974	protein_coding	Sec61g	ENSMUST00000109643	protein_coding	principal1	11	-1	16508484	1862
ENSMUSG00000097715	transcribed_unprocessed_pseudogene	Gpr137b-ps	ENSMUST00000221825	processed_transcript		13	-1	12650380	1301
ENSMUSG00000052609	protein_coding	Plekhg3	ENSMUST00000219751	protein_coding		12	1	76547043	693
ENSMUSG00000042050	protein_coding	Wdr60	ENSMUST00000220761	processed_transcript		12	-1	116241781	194
ENSMUSG00000097715	transcribed_unprocessed_pseudogene	Gpr137b-ps	ENSMUST00000181570	retained_intron		13	-1	12650297	2997
ENSMUSG00000030965	protein_coding	Abraxas2	ENSMUST00000210077	retained_intron		7	1	132859235	1778
ENSMUSG00000043939	protein_coding	A530064D06Rik	ENSMUST00000027764	protein_coding	alternative2	17	-1	48167216	1144
ENSMUSG00000097715	transcribed_unprocessed_pseudogene	Gpr137b-ps	ENSMUST00000222447	retained_intron		13	-1	12649993	709
ENSMUSG00000052609	protein_coding	Plekhg3	ENSMUST00000218357	retained_intron		12	1	76562238	3152
ENSMUSG00000078974	protein_coding	Sec61g	ENSMUST00000109642	protein_coding	principal1	11	-1	16508166	691
ENSMUSG00000078260	protein_coding	Gm11569	ENSMUST00000105057	protein_coding	principal1	11	-1	99798932	869
ENSMUSG00000029798	protein_coding	Herc6	ENSMUST00000031817	protein_coding	principal1	6	1	57581000	4767
ENSMUSG00000042105	protein_coding	Inpp5f	ENSMUST00000142075	retained_intron		7	1	128679686	2939
ENSMUSG00000080771	processed_pseudogene	Gm11925	ENSMUST00000121375	processed_pseudogene		4	1	30193647	535
ENSMUSG00000089901	protein_coding	Gm8113	ENSMUST00000160298	protein_coding	principal1	14	1	43925390	2721
ENSMUSG00000043939	protein_coding	A530064D06Rik	ENSMUST00000233815	retained_intron		17	-1	48167275	1962
ENSMUSG00000046697	protein_coding	Enpp7	ENSMUST00000106273	protein_coding	principal5	11	1	118988216	1923
ENSMUSG00000090265	processed_pseudogene	Gm9550	ENSMUST00000161130	processed_pseudogene		14	1	43940997	862
ENSMUSG00000036596	protein_coding	Cpz	ENSMUST00000038676	protein_coding	principal1	5	-1	35525698	2245
ENSMUSG00000078974	protein_coding	Sec61g	ENSMUST00000131439	retained_intron		11	-1	16505044	474
ENSMUSG00000108594	TEC	Gm44770	ENSMUST00000205395	TEC		6	1	71802888	1264
ENSMUSG00000029798	protein_coding	Herc6	ENSMUST00000203840	nonsense_mediated_decay		6	1	57581008	449
ENSMUSG00000043939	protein_coding	A530064D06Rik	ENSMUST00000233384	retained_intron		17	-1	48167198	652
ENSMUSG00000087180	lincRNA	Gm11924	ENSMUST00000152306	lincRNA		4	1	30432112	1750
ENSMUSG00000108802	TEC	Gm44769	ENSMUST00000206120	TEC		6	1	71790668	2809
ENSMUSG00000052609	protein_coding	Plekhg3	ENSMUST00000219426	retained_intron		12	1	76569776	5641
ENSMUSG00000078259	protein_coding	Gm11554	ENSMUST00000105056	protein_coding	principal1	11	-1	99804446	890
ENSMUSG00000042105	protein_coding	Inpp5f	ENSMUST00000151237	protein_coding		7	1	128687546	2609
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000112550	protein_coding	principal1	2	-1	60125697	7895
ENSMUSG00000078974	protein_coding	Sec61g	ENSMUST00000109641	protein_coding	principal1	11	-1	16508069	450
ENSMUSG00000042105	protein_coding	Inpp5f	ENSMUST00000202419	nonsense_mediated_decay		7	1	128688489	559
ENSMUSG00000036596	protein_coding	Cpz	ENSMUST00000132959	protein_coding		5	-1	35525571	342
ENSMUSG00000052609	protein_coding	Plekhg3	ENSMUST00000218427	retained_intron		12	1	76571550	4815
ENSMUSG00000046697	protein_coding	Enpp7	ENSMUST00000092373	protein_coding	alternative2	11	1	118988188	1370
ENSMUSG00000062761	protein_coding	Zfp512	ENSMUST00000202061	protein_coding		5	1	31452431	500
ENSMUSG00000078974	protein_coding	Sec61g	ENSMUST00000138695	retained_intron		11	-1	16508132	410
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000153711	processed_transcript		2	-1	60125592	1813
ENSMUSG00000030965	protein_coding	Abraxas2	ENSMUST00000147786	nonsense_mediated_decay		7	1	132859237	733
ENSMUSG00000053961	protein_coding	Ang5	ENSMUST00000226667	unprocessed_pseudogene		14	1	43962483	430
ENSMUSG00000042105	protein_coding	Inpp5f	ENSMUST00000118605	protein_coding		7	1	128688489	3220
ENSMUSG00000087196	lincRNA	Gm13373	ENSMUST00000144634	lincRNA		2	-1	28324050	655
ENSMUSG00000030965	protein_coding	Abraxas2	ENSMUST00000106161	protein_coding		7	1	132859244	1224
ENSMUSG00000048294	protein_coding	Krtap4-13	ENSMUST00000050106	protein_coding	principal1	11	-1	99809892	815
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000135722	processed_transcript		2	-1	59960043	4561
ENSMUSG00000106928	TEC	Gm43860	ENSMUST00000201742	TEC		5	-1	35553964	2705
ENSMUSG00000053961	protein_coding	Ang5	ENSMUST00000066719	protein_coding	principal1	14	1	43957069	700
ENSMUSG00000042050	protein_coding	Wdr60	ENSMUST00000223039	retained_intron		12	-1	116262986	3256
ENSMUSG00000081339	processed_pseudogene	Gm16044	ENSMUST00000118475	processed_pseudogene		7	1	128692689	450
ENSMUSG00000029798	protein_coding	Herc6	ENSMUST00000204455	retained_intron		6	1	57604073	1084
ENSMUSG00000089754	unprocessed_pseudogene	Ear-ps7	ENSMUST00000161287	unprocessed_pseudogene		14	-1	43969518	442
ENSMUSG00000030965	protein_coding	Abraxas2	ENSMUST00000144225	retained_intron		7	1	132859249	2620
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000152639	processed_transcript		2	-1	59923932	2539
ENSMUSG00000070828	protein_coding	Zscan4f	ENSMUST00000145237	protein_coding	principal1	7	1	11397915	1829
ENSMUSG00000029798	protein_coding	Herc6	ENSMUST00000203506	retained_intron		6	1	57606511	4378
ENSMUSG00000042050	protein_coding	Wdr60	ENSMUST00000222679	nonsense_mediated_decay		12	-1	116262974	765
ENSMUSG00000030965	protein_coding	Abraxas2	ENSMUST00000129552	nonsense_mediated_decay		7	1	132859249	2827
ENSMUSG00000041132	protein_coding	N4bp2l1	ENSMUST00000016279	protein_coding	principal1	5	-1	150594525	1905
ENSMUSG00000042050	protein_coding	Wdr60	ENSMUST00000221029	retained_intron		12	-1	116262986	1404
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000130637	protein_coding		2	-1	59912536	759
ENSMUSG00000029798	protein_coding	Herc6	ENSMUST00000204843	retained_intron		6	1	57607433	513
ENSMUSG00000091174	protein_coding	Pate10	ENSMUST00000166746	protein_coding	principal1	9	1	35741049	351
ENSMUSG00000078974	protein_coding	Sec61g	ENSMUST00000166950	protein_coding		11	-1	16508484	754
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000147476	processed_transcript		2	-1	59920551	909
ENSMUSG00000030965	protein_coding	Abraxas2	ENSMUST00000134784	nonsense_mediated_decay		7	1	132859307	515
ENSMUSG00000098428	unprocessed_pseudogene	Gm2260	ENSMUST00000184965	unprocessed_pseudogene		14	1	26016431	657
ENSMUSG00000029798	protein_coding	Herc6	ENSMUST00000204166	retained_intron		6	1	57610826	734
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000153136	protein_coding		2	-1	59948216	890
ENSMUSG00000070828	protein_coding	Zscan4f	ENSMUST00000141491	protein_coding		7	1	11397934	521
ENSMUSG00000030965	protein_coding	Abraxas2	ENSMUST00000138436	retained_intron		7	1	132879375	3583
ENSMUSG00000114276	lincRNA	Gm47849	ENSMUST00000225228	lincRNA		13	-1	103970124	1050
ENSMUSG00000107627	processed_pseudogene	Gm19244	ENSMUST00000204340	processed_pseudogene		6	-1	57617277	253
ENSMUSG00000078974	protein_coding	Sec61g	ENSMUST00000178855	protein_coding	principal1	11	-1	16508484	779
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000137480	processed_transcript		2	-1	60125740	740
ENSMUSG00000041132	protein_coding	N4bp2l1	ENSMUST00000202031	protein_coding		5	-1	150576991	1864
ENSMUSG00000029017	protein_coding	Pmpcb	ENSMUST00000030882	protein_coding	principal1	5	1	21737141	1615
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000129124	processed_transcript		2	-1	60090070	665
ENSMUSG00000114637	lincRNA	Gm47851	ENSMUST00000224348	lincRNA		13	-1	103978330	805
ENSMUSG00000078258	protein_coding	Gm11564	ENSMUST00000105055	protein_coding	principal1	11	-1	99815666	691
ENSMUSG00000082949	processed_pseudogene	Gm11920	ENSMUST00000118491	processed_pseudogene		4	-1	30702535	563
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000144893	processed_transcript		2	-1	60209839	657
ENSMUSG00000085522	lincRNA	4930556G01Rik	ENSMUST00000128925	lincRNA		4	1	30664596	891
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000151756	processed_transcript		2	-1	60209801	693
ENSMUSG00000038152	lincRNA	5033430I15Rik	ENSMUST00000038032	lincRNA		13	1	45965253	729
ENSMUSG00000031883	protein_coding	Car7	ENSMUST00000159416	protein_coding		8	1	104534700	1943
ENSMUSG00000109720	processed_pseudogene	Gm18639	ENSMUST00000210442	processed_pseudogene		7	1	11412534	1769
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000134908	processed_transcript		2	-1	60209748	406
ENSMUSG00000109920	processed_pseudogene	Gm9604	ENSMUST00000211175	processed_pseudogene		7	1	11443992	433
ENSMUSG00000038152	lincRNA	5033430I15Rik	ENSMUST00000189843	lincRNA		13	1	45965351	523
ENSMUSG00000078257	protein_coding	2300003K06Rik	ENSMUST00000105054	protein_coding	principal1	11	-1	99838066	1265
ENSMUSG00000109786	processed_pseudogene	Gm7839	ENSMUST00000210755	processed_pseudogene		7	1	11449014	673
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000138089	processed_transcript		2	-1	60209159	509
ENSMUSG00000112825	processed_pseudogene	Gm9118	ENSMUST00000219246	processed_pseudogene		10	1	56497341	754
ENSMUSG00000110083	processed_pseudogene	Gm45382	ENSMUST00000210607	processed_pseudogene		7	-1	11455044	151
ENSMUSG00000040148	protein_coding	Hmx3	ENSMUST00000046093	protein_coding	principal1	7	1	131542867	1457
ENSMUSG00000026987	protein_coding	Baz2b	ENSMUST00000090925	protein_coding	principal1	2	-1	60006187	7576
ENSMUSG00000028106	protein_coding	Rprd2	ENSMUST00000200164	protein_coding		3	-1	95818632	7498
ENSMUSG00000082254	processed_pseudogene	Gm11922	ENSMUST00000118967	processed_pseudogene		4	1	31380472	475
ENSMUSG00000074934	protein_coding	Grem1	ENSMUST00000099575	protein_coding	principal1	2	-1	113758646	4148
ENSMUSG00000045048	processed_pseudogene	Gm9795	ENSMUST00000062156	processed_pseudogene		10	1	56656194	693
ENSMUSG00000082531	processed_pseudogene	Gm11556	ENSMUST00000120751	processed_pseudogene		11	-1	99840260	288
ENSMUSG00000041132	protein_coding	N4bp2l1	ENSMUST00000202279	nonsense_mediated_decay		5	-1	150594462	949
ENSMUSG00000090738	protein_coding	Pate7	ENSMUST00000171898	protein_coding	principal1	9	-1	35778109	643
ENSMUSG00000113021	processed_pseudogene	Gm48440	ENSMUST00000222654	processed_pseudogene		13	-1	12675957	357
ENSMUSG00000081236	processed_pseudogene	Gm13574	ENSMUST00000120482	processed_pseudogene		2	-1	59992344	394
ENSMUSG00000041132	protein_coding	N4bp2l1	ENSMUST00000202291	protein_coding		5	-1	150597188	409
ENSMUSG00000113308	processed_pseudogene	Gm48445	ENSMUST00000223203	processed_pseudogene		13	-1	12679939	193
ENSMUSG00000108883	antisense	Gm44623	ENSMUST00000207934	antisense		7	-1	131385946	434
ENSMUSG00000031883	protein_coding	Car7	ENSMUST00000056051	protein_coding	principal1	8	1	104540807	1538
ENSMUSG00000046474	protein_coding	Krtap4-16	ENSMUST00000107437	protein_coding	principal1	11	-1	99851608	954
ENSMUSG00000028106	protein_coding	Rprd2	ENSMUST00000090791	protein_coding	principal2	3	-1	95818758	7756
ENSMUSG00000098847	protein_coding	Gm27235	ENSMUST00000184431	nonsense_mediated_decay	principal1	9	-1	35790101	903
ENSMUSG00000085975	lincRNA	Gm13572	ENSMUST00000153675	lincRNA		2	1	60037141	559
ENSMUSG00000031883	protein_coding	Car7	ENSMUST00000162761	protein_coding		8	1	104541309	1505
ENSMUSG00000041132	protein_coding	N4bp2l1	ENSMUST00000200840	nonsense_mediated_decay		5	-1	150594528	1371
ENSMUSG00000052852	protein_coding	Reep1	ENSMUST00000121469	protein_coding	principal1	6	1	71707561	3924
ENSMUSG00000082330	processed_pseudogene	Ldha-ps	ENSMUST00000119390	processed_pseudogene		2	1	60134055	995
ENSMUSG00000069717	protein_coding	Gm11568	ENSMUST00000107434	protein_coding	principal1	11	1	99857917	1145
ENSMUSG00000041132	protein_coding	N4bp2l1	ENSMUST00000201319	nonsense_mediated_decay		5	-1	150594500	1121
ENSMUSG00000110095	unprocessed_pseudogene	Gm7207	ENSMUST00000211575	unprocessed_pseudogene		7	-1	11468554	1067
ENSMUSG00000087590	lincRNA	Epb41l4aos	ENSMUST00000146010	lincRNA		18	1	33794892	430
ENSMUSG00000031883	protein_coding	Car7	ENSMUST00000162399	retained_intron		8	1	104547881	592
ENSMUSG00000110120	TEC	Gm45251	ENSMUST00000209486	TEC		8	-1	26132642	1465
ENSMUSG00000028106	protein_coding	Rprd2	ENSMUST00000198740	retained_intron		3	-1	95776780	2167
ENSMUSG00000113996	processed_pseudogene	Gm48455	ENSMUST00000222249	processed_pseudogene		13	1	12679940	420
ENSMUSG00000086603	lincRNA	Gm13620	ENSMUST00000131198	lincRNA		2	1	60125096	511
ENSMUSG00000114674	processed_pseudogene	Gm19239	ENSMUST00000224915	processed_pseudogene		13	1	87826538	522
ENSMUSG00000041132	protein_coding	N4bp2l1	ENSMUST00000200926	retained_intron		5	-1	150593769	747
ENSMUSG00000087181	processed_pseudogene	Gm13570	ENSMUST00000140763	processed_pseudogene		2	-1	60098714	309
ENSMUSG00000087590	lincRNA	Epb41l4aos	ENSMUST00000179138	lincRNA		18	1	33794939	303
ENSMUSG00000052852	protein_coding	Reep1	ENSMUST00000212792	protein_coding		6	1	71707870	3339
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000165457	nonsense_mediated_decay		7	-1	133015490	3463
ENSMUSG00000029017	protein_coding	Pmpcb	ENSMUST00000125693	retained_intron		5	1	21737141	4134
ENSMUSG00000110317	lincRNA	Gm45250	ENSMUST00000209414	lincRNA		8	-1	26155479	3592
ENSMUSG00000108694	processed_pseudogene	Gm7287	ENSMUST00000205267	processed_pseudogene		7	-1	17139472	602
ENSMUSG00000090225	protein_coding	Gm11559	ENSMUST00000092694	protein_coding	principal1	11	1	99864476	1096
ENSMUSG00000114960	TEC	Gm47649	ENSMUST00000223836	TEC		13	-1	87980299	2803
ENSMUSG00000108902	processed_pseudogene	Gm9377	ENSMUST00000207227	processed_pseudogene		7	1	59109920	623
ENSMUSG00000052852	protein_coding	Reep1	ENSMUST00000212631	protein_coding		6	1	71707897	953
ENSMUSG00000029017	protein_coding	Pmpcb	ENSMUST00000149648	protein_coding		5	1	21738036	798
ENSMUSG00000098213	processed_pseudogene	Gm27044	ENSMUST00000183033	processed_pseudogene		13	-1	88185456	796
ENSMUSG00000052818	protein_coding	Olfr813	ENSMUST00000204622	protein_coding	principal1	10	1	129855367	2410
ENSMUSG00000114565	processed_pseudogene	Gm47651	ENSMUST00000225629	processed_pseudogene		13	1	88382346	277
ENSMUSG00000028106	protein_coding	Rprd2	ENSMUST00000197449	protein_coding	alternative2	3	-1	95818778	3298
ENSMUSG00000029017	protein_coding	Pmpcb	ENSMUST00000147236	retained_intron		5	1	21738881	801
ENSMUSG00000029017	protein_coding	Pmpcb	ENSMUST00000150861	retained_intron		5	1	21742740	378
ENSMUSG00000033499	protein_coding	Larp4b	ENSMUST00000188211	protein_coding	principal1	13	1	9093881	5610
ENSMUSG00000028106	protein_coding	Rprd2	ENSMUST00000200428	processed_transcript		3	-1	95776758	589
ENSMUSG00000052818	protein_coding	Olfr813	ENSMUST00000064893	protein_coding	principal1	10	1	129856520	933
ENSMUSG00000010021	protein_coding	Kif19a	ENSMUST00000126555	processed_transcript		11	1	114765388	1959
ENSMUSG00000073116	protein_coding	Gm10471	ENSMUST00000094946	protein_coding	principal1	5	-1	26089291	2967
ENSMUSG00000010021	protein_coding	Kif19a	ENSMUST00000137326	processed_transcript		11	1	114765388	1833
ENSMUSG00000029017	protein_coding	Pmpcb	ENSMUST00000152440	retained_intron		5	1	21756519	400
ENSMUSG00000033499	protein_coding	Larp4b	ENSMUST00000188939	protein_coding		13	1	9093907	2658
ENSMUSG00000029017	protein_coding	Pmpcb	ENSMUST00000141022	nonsense_mediated_decay		5	1	21756645	297
ENSMUSG00000028106	protein_coding	Rprd2	ENSMUST00000198741	retained_intron		3	-1	95818863	1052
ENSMUSG00000059821	protein_coding	Olfr847	ENSMUST00000216839	protein_coding	principal1	9	-1	19378669	2385
ENSMUSG00000033499	protein_coding	Larp4b	ENSMUST00000190041	protein_coding		13	1	9093912	557
ENSMUSG00000029017	protein_coding	Pmpcb	ENSMUST00000137334	retained_intron		5	1	21756781	277
ENSMUSG00000032108	protein_coding	Pate6	ENSMUST00000034619	protein_coding	principal1	9	-1	35790112	1334
ENSMUSG00000059821	protein_coding	Olfr847	ENSMUST00000079620	protein_coding	principal1	9	-1	19375879	939
ENSMUSG00000110590	unprocessed_pseudogene	Olfr848-ps1	ENSMUST00000212241	unprocessed_pseudogene		9	-1	19404529	930
ENSMUSG00000094800	protein_coding	Gm9780	ENSMUST00000184915	protein_coding	principal1	14	-1	26042711	1394
ENSMUSG00000109956	TEC	Gm45428	ENSMUST00000209619	TEC		8	-1	91307755	1789
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000144047	protein_coding		1	1	87755870	749
ENSMUSG00000094800	protein_coding	Gm9780	ENSMUST00000184272	protein_coding		14	-1	26042674	350
ENSMUSG00000053228	protein_coding	Ceacam3	ENSMUST00000108491	protein_coding	principal1	7	1	17150282	3261
ENSMUSG00000025577	protein_coding	Cbx2	ENSMUST00000139746	processed_transcript		11	1	119023725	762
ENSMUSG00000025963	protein_coding	Mdh1b	ENSMUST00000114094	protein_coding	principal1	1	-1	63730318	1719
ENSMUSG00000033499	protein_coding	Larp4b	ENSMUST00000091829	protein_coding		13	1	9093982	5720
ENSMUSG00000099570	transcribed_unprocessed_pseudogene	Gm29000	ENSMUST00000190932	processed_transcript		Y	-1	67077900	1600
ENSMUSG00000099570	transcribed_unprocessed_pseudogene	Gm29000	ENSMUST00000185562	processed_transcript		Y	-1	67077900	571
ENSMUSG00000058886	protein_coding	Deaf1	ENSMUST00000080553	protein_coding	principal1	7	-1	141327672	2135
ENSMUSG00000033499	protein_coding	Larp4b	ENSMUST00000188523	processed_transcript		13	1	9136215	385
ENSMUSG00000099570	transcribed_unprocessed_pseudogene	Gm29000	ENSMUST00000190152	processed_transcript		Y	-1	67077900	1160
ENSMUSG00000070335	protein_coding	Krtap9-1	ENSMUST00000093936	protein_coding	principal1	11	1	99873389	1044
ENSMUSG00000033499	protein_coding	Larp4b	ENSMUST00000190331	processed_transcript		13	1	9136435	405
ENSMUSG00000061540	protein_coding	Orm2	ENSMUST00000075341	protein_coding	principal1	4	1	63362449	775
ENSMUSG00000099570	transcribed_unprocessed_pseudogene	Gm29000	ENSMUST00000187095	processed_transcript		Y	-1	67077812	248
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000087623	protein_coding	principal1	17	1	33524204	4043
ENSMUSG00000058886	protein_coding	Deaf1	ENSMUST00000209600	protein_coding		7	-1	141313264	725
ENSMUSG00000033499	protein_coding	Larp4b	ENSMUST00000189330	retained_intron		13	1	9168361	4666
ENSMUSG00000099570	transcribed_unprocessed_pseudogene	Gm29000	ENSMUST00000189332	processed_transcript		Y	-1	67075862	327
ENSMUSG00000099428	processed_pseudogene	Gm28155	ENSMUST00000191066	processed_pseudogene		13	-1	9140881	151
ENSMUSG00000113860	lincRNA	Gm45949	ENSMUST00000221550	lincRNA		13	1	46060597	1895
ENSMUSG00000113860	lincRNA	Gm45949	ENSMUST00000222657	lincRNA		13	1	46060597	1745
ENSMUSG00000099570	transcribed_unprocessed_pseudogene	Gm29000	ENSMUST00000187132	processed_transcript		Y	-1	67077844	543
ENSMUSG00000079295	transcribed_unprocessed_pseudogene	Klrb1-ps1	ENSMUST00000203057	processed_transcript		6	1	129116518	414
ENSMUSG00000099570	transcribed_unprocessed_pseudogene	Gm29000	ENSMUST00000189833	processed_transcript		Y	-1	67075862	229
ENSMUSG00000099570	transcribed_unprocessed_pseudogene	Gm29000	ENSMUST00000185444	transcribed_unprocessed_pseudogene		Y	-1	67076298	614
ENSMUSG00000069308	protein_coding	Hist1h2bp	ENSMUST00000110473	protein_coding		13	1	21787461	621
ENSMUSG00000079295	transcribed_unprocessed_pseudogene	Klrb1-ps1	ENSMUST00000184388	transcribed_unprocessed_pseudogene		6	1	129116518	701
ENSMUSG00000112191	processed_pseudogene	Gm31931	ENSMUST00000219666	processed_pseudogene		10	-1	56829307	222
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000173241	nonsense_mediated_decay		17	1	33524209	3982
ENSMUSG00000113148	processed_pseudogene	Gm48456	ENSMUST00000222021	processed_pseudogene		13	1	12682289	368
ENSMUSG00000101681	lincRNA	Gm28522	ENSMUST00000190561	lincRNA		Y	-1	33742489	537
ENSMUSG00000113527	lincRNA	Gm48079	ENSMUST00000222938	lincRNA		12	-1	116280231	550
ENSMUSG00000101681	lincRNA	Gm28522	ENSMUST00000185908	lincRNA		Y	-1	33742489	352
ENSMUSG00000113914	processed_pseudogene	Gm48458	ENSMUST00000220640	processed_pseudogene		13	-1	12684013	404
ENSMUSG00000062282	lincRNA	Gm10113	ENSMUST00000072437	lincRNA		13	-1	46191046	3150
ENSMUSG00000078141	unprocessed_pseudogene	Gm2399	ENSMUST00000104944	unprocessed_pseudogene		13	1	12702362	225
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000234715	protein_coding		17	1	33524210	2533
ENSMUSG00000069308	protein_coding	Hist1h2bp	ENSMUST00000102982	protein_coding	principal1	13	1	21787508	469
ENSMUSG00000048251	protein_coding	Bcl11b	ENSMUST00000066060	protein_coding	principal4	12	-1	108003602	8111
ENSMUSG00000109950	processed_pseudogene	Gm45550	ENSMUST00000209380	processed_pseudogene		7	-1	11474317	946
ENSMUSG00000113448	processed_pseudogene	Gm7042	ENSMUST00000223027	processed_pseudogene		13	1	12734379	384
ENSMUSG00000112837	lincRNA	Gm48053	ENSMUST00000217761	lincRNA		10	-1	56914765	1722
ENSMUSG00000025577	protein_coding	Cbx2	ENSMUST00000026662	protein_coding	principal1	11	1	119022962	3807
ENSMUSG00000112327	lincRNA	Gm36827	ENSMUST00000220080	lincRNA		10	-1	56982232	1249
ENSMUSG00000058886	protein_coding	Deaf1	ENSMUST00000210062	nonsense_mediated_decay		7	-1	141327493	2121
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000174170	retained_intron		17	1	33524222	1798
ENSMUSG00000058886	protein_coding	Deaf1	ENSMUST00000211146	nonsense_mediated_decay		7	-1	141310920	534
ENSMUSG00000104304	TEC	Gm36974	ENSMUST00000194200	TEC		9	1	35835387	1071
ENSMUSG00000058886	protein_coding	Deaf1	ENSMUST00000211537	protein_coding		7	-1	141327578	2882
ENSMUSG00000056288	antisense	Gm11961	ENSMUST00000135775	antisense		11	-1	4627766	1319
ENSMUSG00000058886	protein_coding	Deaf1	ENSMUST00000210830	nonsense_mediated_decay		7	-1	141327690	2265
ENSMUSG00000056288	antisense	Gm11961	ENSMUST00000141157	antisense		11	-1	4630011	760
ENSMUSG00000048251	protein_coding	Bcl11b	ENSMUST00000109887	protein_coding	alternative2	12	-1	108003414	2522
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000199869	retained_intron		3	-1	95750952	3614
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000120167	protein_coding	alternative2	3	1	41742611	773
ENSMUSG00000048251	protein_coding	Bcl11b	ENSMUST00000109891	protein_coding	alternative2	12	-1	108003414	2888
ENSMUSG00000053024	protein_coding	Cntn2	ENSMUST00000188065	nonsense_mediated_decay		1	-1	132523393	4287
ENSMUSG00000101870	unprocessed_pseudogene	Gm21745	ENSMUST00000189513	unprocessed_pseudogene		Y	-1	34028884	696
ENSMUSG00000051940	protein_coding	5031410I06Rik	ENSMUST00000063524	protein_coding	principal1	5	-1	26105362	2995
ENSMUSG00000030157	protein_coding	Clec2d	ENSMUST00000032260	protein_coding	principal1	6	1	129180615	1213
ENSMUSG00000001755	protein_coding	Coasy	ENSMUST00000001806	protein_coding	principal1	11	1	101082565	2138
ENSMUSG00000101472	lincRNA	Gm28517	ENSMUST00000190343	lincRNA		Y	1	34063698	174
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000173030	nonsense_mediated_decay		17	1	33524226	4009
ENSMUSG00000057685	processed_pseudogene	Gm8526	ENSMUST00000079153	processed_pseudogene		13	1	88478580	475
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000234497	protein_coding		17	1	33524244	884
ENSMUSG00000114740	processed_pseudogene	Gm47653	ENSMUST00000226036	processed_pseudogene		13	1	88480632	160
ENSMUSG00000058886	protein_coding	Deaf1	ENSMUST00000210816	nonsense_mediated_decay		7	-1	141322012	406
ENSMUSG00000114465	processed_pseudogene	Gm19139	ENSMUST00000224476	processed_pseudogene		13	-1	88511336	1943
ENSMUSG00000058886	protein_coding	Deaf1	ENSMUST00000209397	nonsense_mediated_decay		7	-1	141324132	593
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000173013	nonsense_mediated_decay		17	1	33528314	3733
ENSMUSG00000101407	lincRNA	Gm29532	ENSMUST00000185593	lincRNA		Y	1	34086381	622
ENSMUSG00000101407	lincRNA	Gm29532	ENSMUST00000191113	lincRNA		Y	1	34086381	437
ENSMUSG00000114915	processed_pseudogene	Gm5667	ENSMUST00000225215	processed_pseudogene		13	1	88547216	1055
ENSMUSG00000001755	protein_coding	Coasy	ENSMUST00000151056	processed_transcript		11	1	101082618	760
ENSMUSG00000001755	protein_coding	Coasy	ENSMUST00000151686	processed_transcript		11	1	101083895	940
ENSMUSG00000058886	protein_coding	Deaf1	ENSMUST00000209608	nonsense_mediated_decay		7	-1	141327584	837
ENSMUSG00000030672	protein_coding	Mylpf	ENSMUST00000206204	protein_coding		7	1	127208890	466
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000172922	nonsense_mediated_decay		17	1	33528314	3385
ENSMUSG00000001755	protein_coding	Coasy	ENSMUST00000107308	protein_coding	principal1	11	1	101082625	2386
ENSMUSG00000099500	lincRNA	Gm29531	ENSMUST00000190569	lincRNA		Y	1	34125909	174
ENSMUSG00000084265	processed_pseudogene	Gm14541	ENSMUST00000118985	processed_pseudogene		X	-1	36839293	157
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000174348	nonsense_mediated_decay		17	1	33531632	3249
ENSMUSG00000114273	lincRNA	Gm34585	ENSMUST00000224910	lincRNA		13	1	88521190	880
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000234108	retained_intron		17	1	33531710	752
ENSMUSG00000110607	lincRNA	Gm45843	ENSMUST00000212567	lincRNA		8	-1	104556987	3666
ENSMUSG00000110607	lincRNA	Gm45843	ENSMUST00000212317	lincRNA		8	-1	104556987	4597
ENSMUSG00000054051	protein_coding	Ercc6	ENSMUST00000066807	protein_coding	principal1	14	1	32513521	8423
ENSMUSG00000062761	protein_coding	Zfp512	ENSMUST00000076264	protein_coding	principal1	5	1	31452435	3299
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000173813	processed_transcript		17	1	33531741	737
ENSMUSG00000112930	transcribed_unprocessed_pseudogene	Gm7086	ENSMUST00000219083	transcribed_unprocessed_pseudogene		15	1	60742858	1482
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000174104	retained_intron		17	1	33537336	2779
ENSMUSG00000016308	protein_coding	Ube2a	ENSMUST00000201012	processed_transcript		X	1	36873900	287
ENSMUSG00000112930	transcribed_unprocessed_pseudogene	Gm7086	ENSMUST00000228849	processed_transcript		15	1	60744583	506
ENSMUSG00000047731	protein_coding	Wbp1l	ENSMUST00000138302	protein_coding	principal3	19	1	46599084	3900
ENSMUSG00000104265	processed_pseudogene	Gm8869	ENSMUST00000195222	processed_pseudogene		3	-1	87023883	947
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000173972	retained_intron		17	1	33537719	3967
ENSMUSG00000103913	processed_pseudogene	Gm18403	ENSMUST00000192907	processed_pseudogene		3	1	87054359	529
ENSMUSG00000024299	protein_coding	Adamts10	ENSMUST00000174666	retained_intron		17	1	33543526	2422
ENSMUSG00000062761	protein_coding	Zfp512	ENSMUST00000201450	protein_coding		5	1	31452450	1055
ENSMUSG00000054051	protein_coding	Ercc6	ENSMUST00000228017	retained_intron		14	1	32513530	2991
ENSMUSG00000062761	protein_coding	Zfp512	ENSMUST00000201859	retained_intron		5	1	31452480	3522
ENSMUSG00000102394	processed_pseudogene	Gm37575	ENSMUST00000195467	processed_pseudogene		3	1	87060125	309
ENSMUSG00000054051	protein_coding	Ercc6	ENSMUST00000226285	processed_transcript		14	1	32535482	603
ENSMUSG00000062761	protein_coding	Zfp512	ENSMUST00000202244	protein_coding		5	1	31452516	3045
ENSMUSG00000114984	processed_pseudogene	Gm48947	ENSMUST00000226538	processed_pseudogene		15	1	60760231	514
ENSMUSG00000047731	protein_coding	Wbp1l	ENSMUST00000132202	nonsense_mediated_decay		19	1	46599113	3979
ENSMUSG00000062761	protein_coding	Zfp512	ENSMUST00000201599	retained_intron		5	1	31452518	331
ENSMUSG00000054051	protein_coding	Ercc6	ENSMUST00000228035	processed_transcript		14	1	32548151	473
ENSMUSG00000029676	protein_coding	Pot1a	ENSMUST00000115330	protein_coding	principal1	6	-1	25809226	3151
ENSMUSG00000054051	protein_coding	Ercc6	ENSMUST00000227434	retained_intron		14	1	32551252	2705
ENSMUSG00000030672	protein_coding	Mylpf	ENSMUST00000206772	protein_coding		7	1	127208899	653
ENSMUSG00000062761	protein_coding	Zfp512	ENSMUST00000201945	retained_intron		5	1	31453155	570
ENSMUSG00000101261	lincRNA	1700109I08Rik	ENSMUST00000185680	lincRNA		14	1	39655663	396
ENSMUSG00000062761	protein_coding	Zfp512	ENSMUST00000200782	protein_coding		5	1	31465603	668
ENSMUSG00000029676	protein_coding	Pot1a	ENSMUST00000134339	retained_intron		6	-1	25746196	499
ENSMUSG00000114848	processed_pseudogene	Gm35389	ENSMUST00000224649	processed_pseudogene		14	-1	39840009	226
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000108065	protein_coding	principal3	3	1	41742614	3452
ENSMUSG00000107120	TEC	Gm43059	ENSMUST00000202437	TEC		5	1	31461022	1388
ENSMUSG00000015733	protein_coding	Capza2	ENSMUST00000148694	processed_transcript		6	1	17636234	515
ENSMUSG00000054051	protein_coding	Ercc6	ENSMUST00000228549	nonsense_mediated_decay		14	1	32552575	2899
ENSMUSG00000081433	unprocessed_pseudogene	Serpinb1-ps1	ENSMUST00000118548	unprocessed_pseudogene		13	-1	32863170	586
ENSMUSG00000029765	protein_coding	Plxna4	ENSMUST00000115096	protein_coding	principal1	6	-1	32588192	12877
ENSMUSG00000030672	protein_coding	Mylpf	ENSMUST00000032910	protein_coding	principal1	7	1	127211608	766
ENSMUSG00000059134	protein_coding	Olfr814	ENSMUST00000216966	protein_coding	principal1	10	-1	129879851	3819
ENSMUSG00000029765	protein_coding	Plxna4	ENSMUST00000200732	retained_intron		6	-1	32225199	1427
ENSMUSG00000022789	protein_coding	Dnm1l	ENSMUST00000023477	protein_coding	alternative1	16	-1	16358959	3951
ENSMUSG00000047731	protein_coding	Wbp1l	ENSMUST00000099376	protein_coding	alternative2	19	1	46599114	3911
ENSMUSG00000030672	protein_coding	Mylpf	ENSMUST00000127710	protein_coding		7	1	127212679	268
ENSMUSG00000059134	protein_coding	Olfr814	ENSMUST00000213742	protein_coding	principal1	10	-1	129879851	3798
ENSMUSG00000030672	protein_coding	Mylpf	ENSMUST00000143222	retained_intron		7	1	127213114	165
ENSMUSG00000058328	protein_coding	Xlr5a	ENSMUST00000078574	protein_coding	principal1	X	-1	73117702	1650
ENSMUSG00000059134	protein_coding	Olfr814	ENSMUST00000081367	protein_coding	principal1	10	-1	129874755	933
ENSMUSG00000030672	protein_coding	Mylpf	ENSMUST00000139613	retained_intron		7	1	127213896	285
ENSMUSG00000033282	protein_coding	Rpgrip1l	ENSMUST00000047783	protein_coding	principal1	8	-1	91313262	7009
ENSMUSG00000053024	protein_coding	Cntn2	ENSMUST00000186487	retained_intron		1	-1	132542890	7334
ENSMUSG00000058328	protein_coding	Xlr5a	ENSMUST00000114521	protein_coding		X	-1	73117702	1474
ENSMUSG00000047731	protein_coding	Wbp1l	ENSMUST00000175937	processed_transcript		19	1	46599124	421
ENSMUSG00000029676	protein_coding	Pot1a	ENSMUST00000115329	retained_intron		6	-1	25809226	3271
ENSMUSG00000086763	antisense	Plxna4os1	ENSMUST00000150314	antisense		6	1	32511073	1977
ENSMUSG00000029676	protein_coding	Pot1a	ENSMUST00000115327	protein_coding		6	-1	25809195	2447
ENSMUSG00000052182	protein_coding	Olfr849	ENSMUST00000217273	protein_coding	principal1	9	1	19440266	6140
ENSMUSG00000059845	protein_coding	Gm11567	ENSMUST00000078442	protein_coding	principal1	11	1	99879187	1043
ENSMUSG00000029676	protein_coding	Pot1a	ENSMUST00000156985	processed_transcript		6	-1	25809222	720
ENSMUSG00000087173	antisense	Gm11337	ENSMUST00000144770	antisense		13	-1	23804599	335
ENSMUSG00000052182	protein_coding	Olfr849	ENSMUST00000063923	protein_coding	principal1	9	1	19440915	939
ENSMUSG00000058328	protein_coding	Xlr5a	ENSMUST00000114520	protein_coding	principal1	X	-1	73115363	867
ENSMUSG00000022789	protein_coding	Dnm1l	ENSMUST00000096229	protein_coding	principal4	16	-1	16358938	3966
ENSMUSG00000029676	protein_coding	Pot1a	ENSMUST00000151186	retained_intron		6	-1	25809246	1443
ENSMUSG00000082993	unprocessed_pseudogene	Gm11566	ENSMUST00000118550	unprocessed_pseudogene		11	1	99897573	203
ENSMUSG00000047731	protein_coding	Wbp1l	ENSMUST00000156649	processed_transcript		19	1	46623401	555
ENSMUSG00000058328	protein_coding	Xlr5a	ENSMUST00000179600	protein_coding	principal1	X	-1	73292976	1650
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000143841	nonsense_mediated_decay		3	1	41742617	4129
ENSMUSG00000029676	protein_coding	Pot1a	ENSMUST00000136089	retained_intron		6	-1	25809216	2084
ENSMUSG00000029676	protein_coding	Pot1a	ENSMUST00000147970	processed_transcript		6	-1	25801398	365
ENSMUSG00000029676	protein_coding	Pot1a	ENSMUST00000166445	protein_coding	principal1	6	-1	25798017	1923
ENSMUSG00000016995	protein_coding	Matn4	ENSMUST00000109359	protein_coding		2	-1	164404612	2179
ENSMUSG00000061961	protein_coding	Olfr815	ENSMUST00000216182	protein_coding	principal1	10	-1	129905867	2881
ENSMUSG00000016995	protein_coding	Matn4	ENSMUST00000109358	protein_coding		2	-1	164404612	2056
ENSMUSG00000010021	protein_coding	Kif19a	ENSMUST00000138804	protein_coding		11	1	114765388	2255
ENSMUSG00000061961	protein_coding	Olfr815	ENSMUST00000071557	protein_coding		10	-1	129902726	951
ENSMUSG00000109916	unprocessed_pseudogene	Gm45551	ENSMUST00000211459	unprocessed_pseudogene		7	1	11478208	928
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000119572	protein_coding	alternative2	3	1	41742654	1011
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000195577	retained_intron		3	1	41742656	1264
ENSMUSG00000000567	protein_coding	Sox9	ENSMUST00000000579	protein_coding	principal1	11	1	112782224	4135
ENSMUSG00000022789	protein_coding	Dnm1l	ENSMUST00000115749	protein_coding		16	-1	16358533	3893
ENSMUSG00000094535	protein_coding	Olfr850	ENSMUST00000211832	protein_coding	alternative1	9	-1	19478247	947
ENSMUSG00000033282	protein_coding	Rpgrip1l	ENSMUST00000139113	nonsense_mediated_decay		8	-1	91313222	5046
ENSMUSG00000110076	unprocessed_pseudogene	Gm45549	ENSMUST00000210180	unprocessed_pseudogene		7	-1	11503996	975
ENSMUSG00000047731	protein_coding	Wbp1l	ENSMUST00000111855	protein_coding	alternative2	19	1	46623401	3865
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000026867	protein_coding	alternative2	3	1	41742663	1989
ENSMUSG00000094535	protein_coding	Olfr850	ENSMUST00000077347	protein_coding	principal2	9	-1	19478248	948
ENSMUSG00000100569	unprocessed_pseudogene	Gm28646	ENSMUST00000188220	unprocessed_pseudogene		Y	-1	67113204	697
ENSMUSG00000074553	processed_pseudogene	Eif1-ps1	ENSMUST00000086606	processed_pseudogene		14	1	40006220	330
ENSMUSG00000033282	protein_coding	Rpgrip1l	ENSMUST00000210538	processed_transcript		8	-1	91242324	330
ENSMUSG00000109763	processed_pseudogene	Gm18124	ENSMUST00000210695	processed_pseudogene		7	-1	11510566	706
ENSMUSG00000022789	protein_coding	Dnm1l	ENSMUST00000230958	retained_intron		16	-1	16317446	2913
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000026868	protein_coding		3	1	41742725	514
ENSMUSG00000033282	protein_coding	Rpgrip1l	ENSMUST00000209616	protein_coding		8	-1	91270444	759
ENSMUSG00000114862	processed_pseudogene	Gm4817	ENSMUST00000225522	processed_pseudogene		14	-1	40295530	1411
ENSMUSG00000108705	processed_pseudogene	Gm18905	ENSMUST00000205454	processed_pseudogene		7	-1	44268716	928
ENSMUSG00000016995	protein_coding	Matn4	ENSMUST00000103103	protein_coding	principal1	2	-1	164404614	2304
ENSMUSG00000022789	protein_coding	Dnm1l	ENSMUST00000230022	protein_coding		16	-1	16358545	2635
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000194346	protein_coding	principal3	3	1	41744670	744
ENSMUSG00000033282	protein_coding	Rpgrip1l	ENSMUST00000136198	retained_intron		8	-1	91276762	3511
ENSMUSG00000114543	processed_pseudogene	Gm48028	ENSMUST00000223953	processed_pseudogene		14	1	40329444	274
ENSMUSG00000052625	protein_coding	Olfr851	ENSMUST00000214130	protein_coding	principal1	9	1	19493295	7123
ENSMUSG00000108343	processed_pseudogene	Gm18307	ENSMUST00000206864	processed_pseudogene		7	-1	44282398	949
ENSMUSG00000100809	lincRNA	Gm28612	ENSMUST00000189214	lincRNA		Y	-1	67156992	416
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000195882	protein_coding	principal3	3	1	41746485	680
ENSMUSG00000033282	protein_coding	Rpgrip1l	ENSMUST00000211185	retained_intron		8	-1	91281506	4805
ENSMUSG00000052625	protein_coding	Olfr851	ENSMUST00000064582	protein_coding	principal1	9	1	19496750	939
ENSMUSG00000114280	processed_pseudogene	Gm2791	ENSMUST00000225248	processed_pseudogene		14	1	40449117	505
ENSMUSG00000108512	processed_pseudogene	Gm7238	ENSMUST00000206467	processed_pseudogene		7	-1	44300887	973
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000193075	protein_coding		3	1	41746712	680
ENSMUSG00000033282	protein_coding	Rpgrip1l	ENSMUST00000209564	protein_coding		8	-1	91310417	278
ENSMUSG00000110572	unprocessed_pseudogene	Olfr852-ps1	ENSMUST00000212273	unprocessed_pseudogene		9	-1	19533869	226
ENSMUSG00000016995	protein_coding	Matn4	ENSMUST00000103104	protein_coding	principal1	2	-1	164405160	2243
ENSMUSG00000029868	protein_coding	Trpv6	ENSMUST00000031902	protein_coding	principal1	6	-1	41636405	2923
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000193228	nonsense_mediated_decay		3	1	41746715	846
ENSMUSG00000099962	lincRNA	Gm28613	ENSMUST00000189627	lincRNA		Y	1	67154406	1498
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000192799	retained_intron		3	1	41748583	861
ENSMUSG00000033282	protein_coding	Rpgrip1l	ENSMUST00000132757	protein_coding		8	-1	91311080	404
ENSMUSG00000063715	protein_coding	Olfr816	ENSMUST00000213438	protein_coding	principal1	10	-1	129915597	3306
ENSMUSG00000032867	protein_coding	Fbxw8	ENSMUST00000049474	protein_coding	principal1	5	-1	118155464	5000
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000195030	protein_coding		3	1	41751196	499
ENSMUSG00000075437	lincRNA	Gm11681	ENSMUST00000127337	lincRNA		11	-1	112799008	870
ENSMUSG00000063715	protein_coding	Olfr816	ENSMUST00000213618	processed_transcript		10	-1	129915545	3356
ENSMUSG00000058147	protein_coding	Xlr3c	ENSMUST00000080839	protein_coding	principal1	X	-1	73265390	1584
ENSMUSG00000016995	protein_coding	Matn4	ENSMUST00000154940	retained_intron		2	-1	164404613	4113
ENSMUSG00000022789	protein_coding	Dnm1l	ENSMUST00000230980	protein_coding		16	-1	16358865	2151
ENSMUSG00000029868	protein_coding	Trpv6	ENSMUST00000194405	retained_intron		6	-1	41636380	2633
ENSMUSG00000063715	protein_coding	Olfr816	ENSMUST00000071605	protein_coding	principal1	10	-1	129912276	939
ENSMUSG00000110190	protein_coding	Zscan4-ps2	ENSMUST00000091440	protein_coding	principal1	7	1	11514310	2277
ENSMUSG00000098169	processed_pseudogene	Gm5205	ENSMUST00000182253	processed_pseudogene		14	1	40557238	1003
ENSMUSG00000110089	antisense	Gm36243	ENSMUST00000211546	antisense		8	1	91210570	610
ENSMUSG00000109828	TEC	Gm45662	ENSMUST00000210054	TEC		8	-1	91260535	2098
ENSMUSG00000109985	processed_pseudogene	Gm18640	ENSMUST00000209777	processed_pseudogene		7	1	11528853	2165
ENSMUSG00000022789	protein_coding	Dnm1l	ENSMUST00000230038	protein_coding		16	-1	16358951	1074
ENSMUSG00000109308	processed_pseudogene	Gm44743	ENSMUST00000209062	processed_pseudogene		7	1	59171529	386
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000146165	protein_coding	principal3	3	1	41742618	3574
ENSMUSG00000107096	lincRNA	Gm43597	ENSMUST00000201992	lincRNA		5	-1	150607003	4620
ENSMUSG00000115923	antisense	Gm49521	ENSMUST00000229446	antisense		16	1	16349203	600
ENSMUSG00000025766	protein_coding	D3Ertd751e	ENSMUST00000192193	protein_coding	alternative2	3	1	41742618	3322
ENSMUSG00000109332	TEC	Gm44742	ENSMUST00000207190	TEC		7	-1	59203802	1412
ENSMUSG00000087497	antisense	2810001G20Rik	ENSMUST00000135037	antisense		11	1	64079484	901
ENSMUSG00000113362	lincRNA	Gm40557	ENSMUST00000220946	lincRNA		12	-1	100240252	2119
ENSMUSG00000087497	antisense	2810001G20Rik	ENSMUST00000146333	antisense		11	1	64079582	959
ENSMUSG00000113362	lincRNA	Gm40557	ENSMUST00000220782	lincRNA		12	-1	100242444	2736
ENSMUSG00000103952	TEC	Gm37268	ENSMUST00000192254	TEC		3	1	41773181	2614
ENSMUSG00000006570	protein_coding	Defb2	ENSMUST00000006745	protein_coding	principal1	8	1	21839926	305
ENSMUSG00000107096	lincRNA	Gm43597	ENSMUST00000201650	lincRNA		5	-1	150606966	1057
ENSMUSG00000032867	protein_coding	Fbxw8	ENSMUST00000201545	retained_intron		5	-1	118155426	1937
ENSMUSG00000107096	lincRNA	Gm43597	ENSMUST00000202860	lincRNA		5	-1	150606883	835
ENSMUSG00000070377	protein_coding	Olfr43	ENSMUST00000205664	protein_coding	principal1	11	-1	74211330	2018
ENSMUSG00000020638	protein_coding	Cmpk2	ENSMUST00000020969	protein_coding	principal1	12	1	26469204	3200
ENSMUSG00000029360	antisense	Gm9754	ENSMUST00000031305	antisense		5	1	118065360	3004
ENSMUSG00000051160	protein_coding	Olfr853	ENSMUST00000213834	protein_coding	principal1	9	-1	19541076	3888
ENSMUSG00000010021	protein_coding	Kif19a	ENSMUST00000084368	protein_coding	principal1	11	1	114765389	3433
ENSMUSG00000080966	processed_pseudogene	Gm6263	ENSMUST00000120029	processed_pseudogene		13	-1	74020134	1342
ENSMUSG00000051160	protein_coding	Olfr853	ENSMUST00000058296	protein_coding	principal1	9	-1	19537928	918
ENSMUSG00000026983	protein_coding	Il1f5	ENSMUST00000028360	protein_coding	principal1	2	1	24276954	2842
ENSMUSG00000010021	protein_coding	Kif19a	ENSMUST00000131782	retained_intron		11	1	114784659	391
ENSMUSG00000020638	protein_coding	Cmpk2	ENSMUST00000221826	retained_intron		12	1	26470509	3274
ENSMUSG00000021573	protein_coding	Tppp	ENSMUST00000140217	processed_transcript		13	1	74009407	408
ENSMUSG00000107399	unprocessed_pseudogene	AC134333.1	ENSMUST00000204536	unprocessed_pseudogene		10	-1	129930481	944
ENSMUSG00000070377	protein_coding	Olfr43	ENSMUST00000215550	protein_coding	principal1	11	-1	74211379	1854
ENSMUSG00000020638	protein_coding	Cmpk2	ENSMUST00000220466	processed_transcript		12	1	26470745	576
ENSMUSG00000046607	protein_coding	Hrk	ENSMUST00000184679	processed_transcript		5	1	118164648	646
ENSMUSG00000010021	protein_coding	Kif19a	ENSMUST00000138340	protein_coding		11	1	114787903	1286
ENSMUSG00000026983	protein_coding	Il1f5	ENSMUST00000123053	protein_coding		2	1	24277014	347
ENSMUSG00000020638	protein_coding	Cmpk2	ENSMUST00000221060	retained_intron		12	1	26473930	330
ENSMUSG00000070377	protein_coding	Olfr43	ENSMUST00000078936	protein_coding	principal1	11	-1	74207289	1092
ENSMUSG00000026983	protein_coding	Il1f5	ENSMUST00000195464	retained_intron		2	1	24277271	1808
ENSMUSG00000095667	protein_coding	Olfr854	ENSMUST00000212872	protein_coding	alternative2	9	-1	19567373	939
ENSMUSG00000010021	protein_coding	Kif19a	ENSMUST00000134165	retained_intron		11	1	114787945	406
ENSMUSG00000095667	protein_coding	Olfr854	ENSMUST00000072419	protein_coding	principal2	9	-1	19567382	948
ENSMUSG00000029093	protein_coding	Sorcs2	ENSMUST00000037370	protein_coding	principal1	5	-1	36398124	5707
ENSMUSG00000070377	protein_coding	Olfr43	ENSMUST00000206743	protein_coding		11	-1	74211327	867
ENSMUSG00000026822	protein_coding	Lcn2	ENSMUST00000147219	processed_transcript		2	-1	32387722	1374
ENSMUSG00000058071	protein_coding	Olfr818	ENSMUST00000215527	protein_coding	principal1	10	-1	129949087	1849
ENSMUSG00000026983	protein_coding	Il1f5	ENSMUST00000114490	protein_coding	principal1	2	1	24277271	1403
ENSMUSG00000000202	protein_coding	Btbd17	ENSMUST00000156053	processed_transcript		11	-1	114795873	3020
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000030306	protein_coding	principal1	4	1	95967240	5517
ENSMUSG00000026983	protein_coding	Il1f5	ENSMUST00000147885	protein_coding		2	1	24277272	1392
ENSMUSG00000058071	protein_coding	Olfr818	ENSMUST00000205227	protein_coding		10	-1	129949100	575
ENSMUSG00000046607	protein_coding	Hrk	ENSMUST00000054836	protein_coding	principal1	5	1	118169748	5382
ENSMUSG00000112851	processed_pseudogene	Gm7727	ENSMUST00000219830	processed_pseudogene		12	-1	59646166	671
ENSMUSG00000091412	bidirectional_promoter_lncRNA	Gm2895	ENSMUST00000171591	bidirectional_promoter_lncRNA		15	1	66969323	3194
ENSMUSG00000021573	protein_coding	Tppp	ENSMUST00000022057	protein_coding	principal1	13	1	74009419	5090
ENSMUSG00000058071	protein_coding	Olfr818	ENSMUST00000074308	protein_coding	principal1	10	-1	129946060	957
ENSMUSG00000026983	protein_coding	Il1f5	ENSMUST00000123577	processed_transcript		2	1	24277282	859
ENSMUSG00000112355	TEC	Gm48285	ENSMUST00000219078	TEC		12	-1	59720329	2020
ENSMUSG00000029093	protein_coding	Sorcs2	ENSMUST00000137040	retained_intron		5	-1	36398107	2680
ENSMUSG00000026983	protein_coding	Il1f5	ENSMUST00000168941	protein_coding	principal1	2	1	24276954	1722
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000107083	protein_coding		4	1	95967369	1506
ENSMUSG00000112050	processed_pseudogene	Gm29809	ENSMUST00000218423	processed_pseudogene		12	-1	59977225	493
ENSMUSG00000029093	protein_coding	Sorcs2	ENSMUST00000135324	protein_coding		5	-1	36268479	665
ENSMUSG00000102975	TEC	Gm37347	ENSMUST00000193969	TEC		1	1	40088511	3071
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000169570	protein_coding		7	-1	133015248	3604
ENSMUSG00000043087	protein_coding	Olfr855	ENSMUST00000215587	protein_coding	principal1	9	1	19582617	1797
ENSMUSG00000108462	unprocessed_pseudogene	Gm45032	ENSMUST00000205375	unprocessed_pseudogene		7	1	17173596	520
ENSMUSG00000029093	protein_coding	Sorcs2	ENSMUST00000070720	protein_coding		5	-1	36398139	2089
ENSMUSG00000112455	processed_pseudogene	Gm48289	ENSMUST00000219510	processed_pseudogene		12	1	60155975	312
ENSMUSG00000029093	protein_coding	Sorcs2	ENSMUST00000141508	processed_transcript		5	-1	36365918	650
ENSMUSG00000112144	lincRNA	Gm47861	ENSMUST00000219217	lincRNA		6	1	129238276	699
ENSMUSG00000112092	processed_pseudogene	Gm32936	ENSMUST00000219590	processed_pseudogene		12	1	60317888	177
ENSMUSG00000043087	protein_coding	Olfr855	ENSMUST00000061693	protein_coding	principal1	9	1	19584511	992
ENSMUSG00000112144	lincRNA	Gm47861	ENSMUST00000218416	lincRNA		6	1	129238276	607
ENSMUSG00000084347	processed_pseudogene	Akt2-ps	ENSMUST00000120718	processed_pseudogene		11	1	16514533	1449
ENSMUSG00000053024	protein_coding	Cntn2	ENSMUST00000086521	protein_coding	principal1	1	-1	132542939	7177
ENSMUSG00000000202	protein_coding	Btbd17	ENSMUST00000000206	protein_coding	principal1	11	-1	114795897	1717
ENSMUSG00000101316	processed_pseudogene	Gm12663	ENSMUST00000118481	processed_pseudogene		11	-1	16636066	958
ENSMUSG00000097354	lincRNA	2310001H17Rik	ENSMUST00000181238	lincRNA		6	-1	129237948	2237
ENSMUSG00000094295	protein_coding	Olfr819	ENSMUST00000216322	protein_coding	alternative2	10	-1	129967266	3930
ENSMUSG00000060708	protein_coding	Bloc1s4	ENSMUST00000071949	protein_coding	principal1	5	-1	36748650	1273
ENSMUSG00000053024	protein_coding	Cntn2	ENSMUST00000190601	retained_intron		1	-1	132542865	7236
ENSMUSG00000043430	protein_coding	Psapl1	ENSMUST00000052224	protein_coding	principal1	5	1	36204021	2548
ENSMUSG00000000202	protein_coding	Btbd17	ENSMUST00000156192	processed_transcript		11	-1	114795910	2989
ENSMUSG00000094295	protein_coding	Olfr819	ENSMUST00000167974	protein_coding	principal2	10	-1	129966698	963
ENSMUSG00000053024	protein_coding	Cntn2	ENSMUST00000188143	retained_intron		1	-1	132519157	696
ENSMUSG00000000202	protein_coding	Btbd17	ENSMUST00000141481	processed_transcript		11	-1	114795945	599
ENSMUSG00000110571	processed_pseudogene	Gm45730	ENSMUST00000212560	processed_pseudogene		9	1	19612882	395
ENSMUSG00000112345	lincRNA	Gm40652	ENSMUST00000218944	lincRNA		10	1	57117222	895
ENSMUSG00000107081	antisense	Gm43701	ENSMUST00000202047	antisense		5	1	36748618	391
ENSMUSG00000069307	protein_coding	Hist1h2bq	ENSMUST00000110469	nonsense_mediated_decay		13	-1	21810197	2015
ENSMUSG00000000202	protein_coding	Btbd17	ENSMUST00000146853	processed_transcript		11	-1	114795899	677
ENSMUSG00000112687	processed_pseudogene	Gm18871	ENSMUST00000218655	processed_pseudogene		12	-1	60324920	745
ENSMUSG00000005973	protein_coding	Rcn1	ENSMUST00000006128	protein_coding	principal1	2	-1	105399319	2720
ENSMUSG00000053024	protein_coding	Cntn2	ENSMUST00000188943	protein_coding		1	-1	132533884	460
ENSMUSG00000112840	processed_pseudogene	Gm20049	ENSMUST00000219950	processed_pseudogene		12	-1	60424136	730
ENSMUSG00000095608	protein_coding	Olfr247	ENSMUST00000215871	protein_coding	principal5	10	-1	129976140	1983
ENSMUSG00000026073	protein_coding	Il1r2	ENSMUST00000191671	protein_coding		1	1	40074079	760
ENSMUSG00000000202	protein_coding	Btbd17	ENSMUST00000141386	processed_transcript		11	-1	114795873	573
ENSMUSG00000095608	protein_coding	Olfr247	ENSMUST00000170920	protein_coding	alternative2	10	-1	129975567	963
ENSMUSG00000053024	protein_coding	Cntn2	ENSMUST00000186530	protein_coding		1	-1	132543256	308
ENSMUSG00000039686	protein_coding	Zer1	ENSMUST00000044751	protein_coding		2	-1	30124454	4100
ENSMUSG00000113549	processed_pseudogene	Gm7739	ENSMUST00000221131	processed_pseudogene		12	1	60526518	1560
ENSMUSG00000000202	protein_coding	Btbd17	ENSMUST00000137965	processed_transcript		11	-1	114795892	392
ENSMUSG00000040466	protein_coding	Blvrb	ENSMUST00000037399	protein_coding	principal1	7	1	27447978	1028
ENSMUSG00000005973	protein_coding	Rcn1	ENSMUST00000127019	retained_intron		2	-1	105395348	2208
ENSMUSG00000113678	processed_pseudogene	Gm6068	ENSMUST00000222270	processed_pseudogene		12	-1	60548238	387
ENSMUSG00000069307	protein_coding	Hist1h2bq	ENSMUST00000091749	protein_coding	principal1	13	-1	21810197	1254
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000154241	protein_coding	principal3	5	-1	31154251	1724
ENSMUSG00000046215	protein_coding	Rprml	ENSMUST00000057870	protein_coding	principal1	11	1	103649570	1010
ENSMUSG00000040466	protein_coding	Blvrb	ENSMUST00000108358	protein_coding		7	1	27448032	951
ENSMUSG00000039686	protein_coding	Zer1	ENSMUST00000113677	protein_coding	principal1	2	-1	30124582	4189
ENSMUSG00000016308	protein_coding	Ube2a	ENSMUST00000016452	protein_coding	principal3	X	1	36874295	1732
ENSMUSG00000115724	lincRNA	Gm49087	ENSMUST00000227597	lincRNA		14	-1	43987466	2947
ENSMUSG00000081332	processed_pseudogene	Gm12664	ENSMUST00000118306	processed_pseudogene		11	-1	16643921	913
ENSMUSG00000090109	unprocessed_pseudogene	Ear-ps10	ENSMUST00000161871	unprocessed_pseudogene		14	1	43991714	460
ENSMUSG00000063529	protein_coding	Stmnd1	ENSMUST00000076622	protein_coding	principal1	13	1	46273721	1363
ENSMUSG00000040466	protein_coding	Blvrb	ENSMUST00000133750	protein_coding		7	1	27448054	509
ENSMUSG00000039686	protein_coding	Zer1	ENSMUST00000152285	retained_intron		2	-1	30101772	721
ENSMUSG00000097354	lincRNA	2310001H17Rik	ENSMUST00000181517	lincRNA		6	-1	129233974	3981
ENSMUSG00000116667	processed_pseudogene	Gm49641	ENSMUST00000232306	processed_pseudogene		16	1	95102404	793
ENSMUSG00000040466	protein_coding	Blvrb	ENSMUST00000207799	retained_intron		7	1	27448061	1504
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000200744	protein_coding		5	-1	31154222	1653
ENSMUSG00000039686	protein_coding	Zer1	ENSMUST00000152068	retained_intron		2	-1	30102741	880
ENSMUSG00000117964	antisense	Gm36043	ENSMUST00000237571	antisense		19	-1	29379591	460
ENSMUSG00000016308	protein_coding	Ube2a	ENSMUST00000202783	retained_intron		X	1	36874331	481
ENSMUSG00000097354	lincRNA	2310001H17Rik	ENSMUST00000205051	lincRNA		6	-1	129237991	676
ENSMUSG00000117964	antisense	Gm36043	ENSMUST00000236682	antisense		19	-1	29384471	4469
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000200833	protein_coding		5	-1	31154193	1171
ENSMUSG00000112217	processed_pseudogene	Gm48055	ENSMUST00000219312	processed_pseudogene		10	-1	57266754	256
ENSMUSG00000072598	protein_coding	Ang6	ENSMUST00000160223	unprocessed_pseudogene		14	-1	44002268	439
ENSMUSG00000072598	protein_coding	Ang6	ENSMUST00000096869	protein_coding	principal1	14	-1	44002269	444
ENSMUSG00000111954	processed_pseudogene	Gm7001	ENSMUST00000219384	processed_pseudogene		10	1	57290889	1465
ENSMUSG00000016308	protein_coding	Ube2a	ENSMUST00000202991	protein_coding	alternative1	X	1	36874331	715
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000202241	protein_coding	alternative1	5	-1	31154228	903
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000093078	protein_coding	alternative2	8	1	121950492	2289
ENSMUSG00000116601	TEC	Gm49642	ENSMUST00000231527	TEC		16	-1	95171510	1673
ENSMUSG00000111969	processed_pseudogene	Gm9129	ENSMUST00000218173	processed_pseudogene		10	1	57386423	1689
ENSMUSG00000097354	lincRNA	2310001H17Rik	ENSMUST00000203780	lincRNA		6	-1	129238725	1402
ENSMUSG00000097354	lincRNA	2310001H17Rik	ENSMUST00000180379	lincRNA		6	-1	129238482	521
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000201353	protein_coding	principal3	5	-1	31154152	846
ENSMUSG00000111988	processed_pseudogene	Gm19256	ENSMUST00000218550	processed_pseudogene		10	-1	57413711	231
ENSMUSG00000040466	protein_coding	Blvrb	ENSMUST00000108357	protein_coding		7	1	27452418	782
ENSMUSG00000090051	processed_pseudogene	Gm8194	ENSMUST00000159783	processed_pseudogene		14	-1	44022458	859
ENSMUSG00000016308	protein_coding	Ube2a	ENSMUST00000201068	protein_coding		X	1	36874341	1298
ENSMUSG00000097354	lincRNA	2310001H17Rik	ENSMUST00000204328	lincRNA		6	-1	129233983	338
ENSMUSG00000016308	protein_coding	Ube2a	ENSMUST00000200835	protein_coding		X	1	36874346	911
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000200864	protein_coding	principal3	5	-1	31154192	878
ENSMUSG00000097370	lincRNA	4930467K11Rik	ENSMUST00000180831	lincRNA		10	-1	57486351	723
ENSMUSG00000104269	TEC	Gm37749	ENSMUST00000193917	TEC		1	1	147089037	1899
ENSMUSG00000016308	protein_coding	Ube2a	ENSMUST00000201117	protein_coding		X	1	36874358	552
ENSMUSG00000040466	protein_coding	Blvrb	ENSMUST00000153644	processed_transcript		7	1	27452444	472
ENSMUSG00000024955	protein_coding	Esrra	ENSMUST00000172975	protein_coding		19	-1	6921051	1975
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000201171	protein_coding		5	-1	31146040	489
ENSMUSG00000112859	lincRNA	Gm48522	ENSMUST00000220114	lincRNA		12	-1	45736901	1200
ENSMUSG00000067698	protein_coding	Gm10220	ENSMUST00000088236	protein_coding	principal1	5	-1	26121421	2980
ENSMUSG00000016308	protein_coding	Ube2a	ENSMUST00000202812	protein_coding		X	1	36874653	719
ENSMUSG00000102134	TEC	Gm9931	ENSMUST00000193584	TEC		1	-1	147281942	1185
ENSMUSG00000052403	antisense	Fcnaos	ENSMUST00000155684	antisense		2	1	25607892	798
ENSMUSG00000080970	unprocessed_pseudogene	Gm12173	ENSMUST00000117622	unprocessed_pseudogene		11	-1	46646959	273
ENSMUSG00000025151	protein_coding	Maged1	ENSMUST00000026142	protein_coding	principal1	X	-1	94542143	2821
ENSMUSG00000052403	antisense	Fcnaos	ENSMUST00000127642	antisense		2	1	25616007	1351
ENSMUSG00000026073	protein_coding	Il1r2	ENSMUST00000027243	protein_coding	principal1	1	1	40084698	1419
ENSMUSG00000016308	protein_coding	Ube2a	ENSMUST00000201050	retained_intron		X	1	36881477	603
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000202836	retained_intron		5	-1	31146060	699
ENSMUSG00000024955	protein_coding	Esrra	ENSMUST00000239322	protein_coding		19	-1	6921840	2274
ENSMUSG00000069376	processed_pseudogene	Gm5507	ENSMUST00000091897	processed_pseudogene		18	1	53984321	1008
ENSMUSG00000039686	protein_coding	Zer1	ENSMUST00000154231	retained_intron		2	-1	30124585	3934
ENSMUSG00000112915	unprocessed_pseudogene	Gm18112	ENSMUST00000219862	unprocessed_pseudogene		12	-1	46273884	1195
ENSMUSG00000039686	protein_coding	Zer1	ENSMUST00000133354	retained_intron		2	-1	30124579	3765
ENSMUSG00000052403	antisense	Fcnaos	ENSMUST00000135799	antisense		2	1	25630673	339
ENSMUSG00000026073	protein_coding	Il1r2	ENSMUST00000195770	nonsense_mediated_decay		1	1	40084792	1054
ENSMUSG00000052403	antisense	Fcnaos	ENSMUST00000163217	antisense		2	1	25627670	432
ENSMUSG00000024955	protein_coding	Esrra	ENSMUST00000173635	protein_coding		19	-1	6921761	727
ENSMUSG00000117769	processed_pseudogene	Gm8594	ENSMUST00000237377	processed_pseudogene		18	-1	54031308	610
ENSMUSG00000026073	protein_coding	Il1r2	ENSMUST00000194913	protein_coding		1	1	40085985	366
ENSMUSG00000112088	unprocessed_pseudogene	Gm48531	ENSMUST00000218273	unprocessed_pseudogene		12	1	46281906	324
ENSMUSG00000024955	protein_coding	Esrra	ENSMUST00000173308	processed_transcript		19	-1	6921813	654
ENSMUSG00000039686	protein_coding	Zer1	ENSMUST00000139128	retained_intron		2	-1	30110773	3097
ENSMUSG00000097899	antisense	Gm16894	ENSMUST00000181756	antisense		1	-1	40085851	842
ENSMUSG00000112811	processed_pseudogene	Gm7422	ENSMUST00000220115	processed_pseudogene		12	-1	46479327	640
ENSMUSG00000024955	protein_coding	Esrra	ENSMUST00000145192	retained_intron		19	-1	6921767	2489
ENSMUSG00000074006	protein_coding	Omp	ENSMUST00000098281	protein_coding	principal1	7	-1	98145502	2144
ENSMUSG00000039686	protein_coding	Zer1	ENSMUST00000131858	processed_transcript		2	-1	30107642	363
ENSMUSG00000039686	protein_coding	Zer1	ENSMUST00000149818	retained_intron		2	-1	30108542	623
ENSMUSG00000096982	lincRNA	Redrum	ENSMUST00000181269	lincRNA		18	1	54422295	2228
ENSMUSG00000097735	lincRNA	D930032P07Rik	ENSMUST00000181393	lincRNA		19	1	28678224	1314
ENSMUSG00000024955	protein_coding	Esrra	ENSMUST00000025906	protein_coding	principal1	19	-1	6921808	2241
ENSMUSG00000117881	lincRNA	Gm50361	ENSMUST00000237842	lincRNA		18	1	54476765	949
ENSMUSG00000097735	lincRNA	D930032P07Rik	ENSMUST00000181625	lincRNA		19	1	28678228	1038
ENSMUSG00000112174	lincRNA	Gm48535	ENSMUST00000217951	lincRNA		12	-1	46665709	2960
ENSMUSG00000106656	lincRNA	Gm42750	ENSMUST00000199745	lincRNA		5	1	44865149	353
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000202375	retained_intron		5	-1	31154218	1472
ENSMUSG00000016496	protein_coding	Cd274	ENSMUST00000016640	protein_coding	principal1	19	1	29367455	3622
ENSMUSG00000089952	sense_intronic	4933413C19Rik	ENSMUST00000162380	sense_intronic		19	-1	28583294	2217
ENSMUSG00000082016	processed_pseudogene	Pgam1-ps2	ENSMUST00000117129	processed_pseudogene		7	-1	27470535	765
ENSMUSG00000037161	protein_coding	Mgarp	ENSMUST00000108046	protein_coding		3	-1	51396526	1409
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000201491	protein_coding		5	-1	31154221	923
ENSMUSG00000102199	TEC	Gm38172	ENSMUST00000195321	TEC		12	1	60866592	567
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000202614	retained_intron		5	-1	31154218	647
ENSMUSG00000118103	lincRNA	4933434P08Rik	ENSMUST00000237202	lincRNA		18	-1	54496584	1317
ENSMUSG00000107283	protein_coding	Mpv17	ENSMUST00000202203	retained_intron		5	-1	31153742	599
ENSMUSG00000062496	lincRNA	4930431F12Rik	ENSMUST00000199309	lincRNA		5	1	44966200	2263
ENSMUSG00000015733	protein_coding	Capza2	ENSMUST00000015877	protein_coding	principal1	6	1	17636983	2537
ENSMUSG00000112169	TEC	Gm48536	ENSMUST00000218252	TEC		12	-1	46686474	3330
ENSMUSG00000062496	lincRNA	4930431F12Rik	ENSMUST00000079389	lincRNA		5	1	44966583	429
ENSMUSG00000085771	sense_intronic	C230066G23Rik	ENSMUST00000150195	sense_intronic		5	1	105580440	650
ENSMUSG00000025151	protein_coding	Maged1	ENSMUST00000153386	retained_intron		X	-1	94541990	2884
ENSMUSG00000029014	protein_coding	Dnajc2	ENSMUST00000030771	protein_coding	principal2	5	-1	21785251	2133
ENSMUSG00000026822	protein_coding	Lcn2	ENSMUST00000050785	protein_coding	principal1	2	-1	32387797	915
ENSMUSG00000117907	lincRNA	Gm50142	ENSMUST00000235539	lincRNA		18	1	66036827	681
ENSMUSG00000015733	protein_coding	Capza2	ENSMUST00000156701	retained_intron		6	1	17637035	3678
ENSMUSG00000025151	protein_coding	Maged1	ENSMUST00000139375	retained_intron		X	-1	94537835	1274
ENSMUSG00000112410	lincRNA	B230217J21Rik	ENSMUST00000218349	lincRNA		12	1	46667317	3896
ENSMUSG00000037161	protein_coding	Mgarp	ENSMUST00000038154	protein_coding	principal2	3	-1	51396548	1232
ENSMUSG00000026822	protein_coding	Lcn2	ENSMUST00000144569	retained_intron		2	-1	32385999	827
ENSMUSG00000015733	protein_coding	Capza2	ENSMUST00000136771	processed_transcript		6	1	17637042	358
ENSMUSG00000029014	protein_coding	Dnajc2	ENSMUST00000115193	protein_coding		5	-1	21785184	2416
ENSMUSG00000025151	protein_coding	Maged1	ENSMUST00000133982	retained_intron		X	-1	94542003	943
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000125627	processed_transcript		4	1	95967363	2336
ENSMUSG00000026822	protein_coding	Lcn2	ENSMUST00000155830	retained_intron		2	-1	32386107	740
ENSMUSG00000118154	lincRNA	9330117O12Rik	ENSMUST00000237954	lincRNA		18	1	54611744	1840
ENSMUSG00000025151	protein_coding	Maged1	ENSMUST00000141702	retained_intron		X	-1	94538826	873
ENSMUSG00000105247	TEC	Gm42519	ENSMUST00000199282	TEC		5	-1	45247307	3656
ENSMUSG00000026822	protein_coding	Lcn2	ENSMUST00000192241	protein_coding		2	-1	32388252	908
ENSMUSG00000037161	protein_coding	Mgarp	ENSMUST00000141156	protein_coding	alternative2	3	-1	51396738	1246
ENSMUSG00000104781	lincRNA	Gm43303	ENSMUST00000200133	lincRNA		5	-1	45251929	669
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000156910	processed_transcript		4	1	96021241	3621
ENSMUSG00000015733	protein_coding	Capza2	ENSMUST00000130606	nonsense_mediated_decay		6	1	17637110	1046
ENSMUSG00000025151	protein_coding	Maged1	ENSMUST00000138731	retained_intron		X	-1	94537884	779
ENSMUSG00000026822	protein_coding	Lcn2	ENSMUST00000136509	retained_intron		2	-1	32387759	789
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000170857	protein_coding	principal3	8	1	121950544	5444
ENSMUSG00000025995	protein_coding	Wdr75	ENSMUST00000027139	protein_coding	principal1	1	1	45795166	2953
ENSMUSG00000015733	protein_coding	Capza2	ENSMUST00000152005	protein_coding		6	1	17637113	517
ENSMUSG00000037161	protein_coding	Mgarp	ENSMUST00000157054	retained_intron		3	-1	51396503	880
ENSMUSG00000025151	protein_coding	Maged1	ENSMUST00000138146	retained_intron		X	-1	94537564	1278
ENSMUSG00000058402	protein_coding	Zfp420	ENSMUST00000074876	protein_coding	principal1	7	1	29859979	2537
ENSMUSG00000015733	protein_coding	Capza2	ENSMUST00000142592	retained_intron		6	1	17660606	749
ENSMUSG00000118319	transcribed_processed_pseudogene	Gm2176	ENSMUST00000236225	processed_transcript		18	-1	80544546	1734
ENSMUSG00000037161	protein_coding	Mgarp	ENSMUST00000145938	processed_transcript		3	-1	51396488	586
ENSMUSG00000026718	protein_coding	Stam	ENSMUST00000102960	protein_coding	principal2	2	1	14074098	5000
ENSMUSG00000055200	protein_coding	Sertad3	ENSMUST00000068641	protein_coding	principal1	7	1	27473768	1329
ENSMUSG00000118319	transcribed_processed_pseudogene	Gm2176	ENSMUST00000237325	transcribed_processed_pseudogene		18	-1	80544015	763
ENSMUSG00000029092	lincRNA	D5Ertd615e	ENSMUST00000197016	lincRNA		5	-1	45424402	3911
ENSMUSG00000026718	protein_coding	Stam	ENSMUST00000156901	processed_transcript		2	1	14074108	616
ENSMUSG00000058402	protein_coding	Zfp420	ENSMUST00000148489	retained_intron		7	1	29860004	2202
ENSMUSG00000029092	lincRNA	D5Ertd615e	ENSMUST00000198493	lincRNA		5	-1	45175693	1032
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000141448	processed_transcript		4	1	95974386	2011
ENSMUSG00000058402	protein_coding	Zfp420	ENSMUST00000145952	processed_transcript		7	1	29860011	2982
ENSMUSG00000029092	lincRNA	D5Ertd615e	ENSMUST00000030975	lincRNA		5	-1	45169564	408
ENSMUSG00000087622	lincRNA	Gm12290	ENSMUST00000145095	lincRNA		11	1	64164573	2112
ENSMUSG00000026718	protein_coding	Stam	ENSMUST00000028050	protein_coding	alternative2	2	1	14074189	3981
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000146947	processed_transcript		4	1	96002446	676
ENSMUSG00000022659	protein_coding	Gcsam	ENSMUST00000161347	protein_coding	alternative2	16	1	45610380	1796
ENSMUSG00000058402	protein_coding	Zfp420	ENSMUST00000057652	protein_coding	principal1	7	1	29860041	2744
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000124202	processed_transcript		4	1	96003620	713
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000172681	nonsense_mediated_decay		8	1	121950575	893
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000026354	protein_coding	alternative2	8	1	121950580	1970
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000148291	processed_transcript		4	1	96004335	537
ENSMUSG00000118307	processed_pseudogene	Gm5821	ENSMUST00000235369	processed_pseudogene		18	1	54766132	249
ENSMUSG00000058402	protein_coding	Zfp420	ENSMUST00000130272	retained_intron		7	1	29872524	768
ENSMUSG00000118379	lincRNA	Gm41790	ENSMUST00000237693	lincRNA		18	-1	80605811	1628
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000174753	protein_coding		8	1	121950585	513
ENSMUSG00000114112	lincRNA	Gm48301	ENSMUST00000220664	lincRNA		12	1	61195126	864
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000125584	processed_transcript		4	1	96016184	433
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000174445	nonsense_mediated_decay		8	1	121950596	470
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000166439	protein_coding		7	-1	133123166	1997
ENSMUSG00000115557	unitary_pseudogene	Gm40318	ENSMUST00000227994	unitary_pseudogene		5	-1	36766695	296
ENSMUSG00000021464	protein_coding	Ror2	ENSMUST00000149299	processed_transcript		13	-1	53275658	324
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000140128	processed_transcript		4	1	96020011	532
ENSMUSG00000029014	protein_coding	Dnajc2	ENSMUST00000132962	retained_intron		5	-1	21785170	3758
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000172511	protein_coding		8	1	121950605	699
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000102508	protein_coding	alternative1	4	1	139192899	1674
ENSMUSG00000022659	protein_coding	Gcsam	ENSMUST00000023339	protein_coding	principal3	16	1	45610423	3315
ENSMUSG00000113518	processed_pseudogene	Gm48304	ENSMUST00000221398	processed_pseudogene		12	1	61256638	328
ENSMUSG00000028572	protein_coding	Hook1	ENSMUST00000143326	processed_transcript		4	1	96013293	428
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000173753	retained_intron		8	1	121974448	706
ENSMUSG00000114039	processed_pseudogene	Gm48305	ENSMUST00000222708	processed_pseudogene		12	1	61263831	548
ENSMUSG00000054720	protein_coding	Lrrc8c	ENSMUST00000067924	protein_coding	principal1	5	1	105519388	6976
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000173254	protein_coding	alternative2	8	1	121974496	1521
ENSMUSG00000029014	protein_coding	Dnajc2	ENSMUST00000115195	protein_coding	alternative1	5	-1	21785216	1994
ENSMUSG00000038812	protein_coding	Trmt112	ENSMUST00000088257	protein_coding	principal1	19	1	6909698	957
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000172513	retained_intron		8	1	121978322	481
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000131912	protein_coding		4	1	139192922	669
ENSMUSG00000086764	lincRNA	4930527A07Rik	ENSMUST00000130677	lincRNA		2	1	105476501	559
ENSMUSG00000029014	protein_coding	Dnajc2	ENSMUST00000145955	retained_intron		5	-1	21768667	432
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000174327	retained_intron		8	1	121991458	445
ENSMUSG00000044125	processed_transcript	9530080O11Rik	ENSMUST00000137239	processed_transcript		4	-1	95967655	1475
ENSMUSG00000054720	protein_coding	Lrrc8c	ENSMUST00000150981	protein_coding		5	1	105519416	510
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000167711	protein_coding		8	1	121991604	1289
ENSMUSG00000044125	processed_transcript	9530080O11Rik	ENSMUST00000143332	processed_transcript		4	-1	95967035	665
ENSMUSG00000029014	protein_coding	Dnajc2	ENSMUST00000147987	retained_intron		5	-1	21785154	1011
ENSMUSG00000054720	protein_coding	Lrrc8c	ENSMUST00000153955	retained_intron		5	1	105519473	599
ENSMUSG00000029014	protein_coding	Dnajc2	ENSMUST00000115192	protein_coding		5	-1	21785185	1132
ENSMUSG00000026718	protein_coding	Stam	ENSMUST00000193636	nonsense_mediated_decay		2	1	14074222	2610
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000033269	protein_coding	principal1	7	-1	133123367	2321
ENSMUSG00000038398	protein_coding	Upf3a	ENSMUST00000043767	protein_coding	principal1	8	1	13785615	2057
ENSMUSG00000054720	protein_coding	Lrrc8c	ENSMUST00000153754	protein_coding		5	1	105558858	702
ENSMUSG00000026718	protein_coding	Stam	ENSMUST00000138989	protein_coding		2	1	14074427	711
ENSMUSG00000083006	processed_pseudogene	Gm15715	ENSMUST00000118032	processed_pseudogene		5	-1	21748513	283
ENSMUSG00000038812	protein_coding	Trmt112	ENSMUST00000116551	protein_coding	principal1	19	1	6909747	985
ENSMUSG00000026718	protein_coding	Stam	ENSMUST00000140694	retained_intron		2	1	14128337	490
ENSMUSG00000026718	protein_coding	Stam	ENSMUST00000144944	processed_transcript		2	1	14129047	386
ENSMUSG00000038398	protein_coding	Upf3a	ENSMUST00000211724	retained_intron		8	1	13785635	3698
ENSMUSG00000006423	protein_coding	C330007P06Rik	ENSMUST00000047486	protein_coding	principal1	X	-1	36874111	3467
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000168958	protein_coding		7	-1	133023757	752
ENSMUSG00000038398	protein_coding	Upf3a	ENSMUST00000211643	retained_intron		8	1	13785645	1131
ENSMUSG00000004473	protein_coding	Clec11a	ENSMUST00000004587	protein_coding	principal1	7	-1	44306902	2978
ENSMUSG00000025995	protein_coding	Wdr75	ENSMUST00000154436	retained_intron		1	1	45795449	3226
ENSMUSG00000038812	protein_coding	Trmt112	ENSMUST00000172869	retained_intron		19	1	6910153	485
ENSMUSG00000118270	processed_pseudogene	Gm17819	ENSMUST00000237894	processed_pseudogene		19	1	17692763	138
ENSMUSG00000026718	protein_coding	Stam	ENSMUST00000128777	retained_intron		2	1	14130844	652
ENSMUSG00000101786	transcribed_unprocessed_pseudogene	Gm28840	ENSMUST00000191514	processed_transcript		Y	-1	70812605	738
ENSMUSG00000006423	protein_coding	C330007P06Rik	ENSMUST00000115249	protein_coding		X	-1	36864238	1145
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000172341	protein_coding		7	-1	133122200	920
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000173396	processed_transcript		8	1	121997089	780
ENSMUSG00000025995	protein_coding	Wdr75	ENSMUST00000142145	retained_intron		1	1	45795503	615
ENSMUSG00000026938	protein_coding	Fcna	ENSMUST00000028307	protein_coding	principal1	2	-1	25628030	1374
ENSMUSG00000055302	protein_coding	Mrfap1	ENSMUST00000068795	protein_coding	principal1	5	-1	36796772	1648
ENSMUSG00000026718	protein_coding	Stam	ENSMUST00000131734	retained_intron		2	1	14134122	632
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000173925	processed_transcript		8	1	122000669	609
ENSMUSG00000038812	protein_coding	Trmt112	ENSMUST00000174786	protein_coding		19	1	6910164	646
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000102507	protein_coding	principal4	4	1	139192924	1702
ENSMUSG00000033187	protein_coding	BC016579	ENSMUST00000036732	protein_coding	principal1	16	-1	45654068	2142
ENSMUSG00000021061	protein_coding	Sptb	ENSMUST00000021458	protein_coding	principal2	12	-1	76710547	10394
ENSMUSG00000025995	protein_coding	Wdr75	ENSMUST00000147308	protein_coding		1	1	45795507	468
ENSMUSG00000025316	protein_coding	Banp	ENSMUST00000173201	retained_intron		8	1	122000847	457
ENSMUSG00000067768	protein_coding	Xlr4b	ENSMUST00000156188	protein_coding		X	1	73214333	827
ENSMUSG00000084979	lincRNA	Gm16267	ENSMUST00000140569	lincRNA		12	1	33111962	732
ENSMUSG00000098029	transcribed_processed_pseudogene	Gm7745	ENSMUST00000222914	processed_transcript		12	-1	61353891	567
ENSMUSG00000116593	processed_pseudogene	Gm49585	ENSMUST00000231331	processed_pseudogene		16	1	45642357	192
ENSMUSG00000054446	protein_coding	Cpa1	ENSMUST00000031806	protein_coding	principal1	6	1	30639218	1583
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000131793	retained_intron		4	1	139192939	353
ENSMUSG00000024953	protein_coding	Prdx5	ENSMUST00000145300	retained_intron		19	-1	6909978	1826
ENSMUSG00000028016	protein_coding	Ints12	ENSMUST00000029650	protein_coding	principal1	3	1	133091840	3101
ENSMUSG00000026938	protein_coding	Fcna	ENSMUST00000142371	processed_transcript		2	-1	25627288	560
ENSMUSG00000115848	processed_pseudogene	Gm9509	ENSMUST00000227699	processed_pseudogene		15	-1	37172404	1347
ENSMUSG00000019810	protein_coding	Fuca2	ENSMUST00000130865	protein_coding		10	1	13499540	223
ENSMUSG00000098029	transcribed_processed_pseudogene	Gm7745	ENSMUST00000182235	transcribed_processed_pseudogene		12	-1	61354674	973
ENSMUSG00000025995	protein_coding	Wdr75	ENSMUST00000143737	processed_transcript		1	1	45801989	1945
ENSMUSG00000019810	protein_coding	Fuca2	ENSMUST00000120549	protein_coding		10	1	13499544	374
ENSMUSG00000115621	processed_pseudogene	Gm8664	ENSMUST00000226193	processed_pseudogene		15	-1	37182701	937
ENSMUSG00000025995	protein_coding	Wdr75	ENSMUST00000146602	processed_transcript		1	1	45803686	387
ENSMUSG00000100476	processed_pseudogene	Nanog-ps2	ENSMUST00000190988	processed_pseudogene		12	1	61458510	529
ENSMUSG00000009470	protein_coding	Tnpo1	ENSMUST00000109399	protein_coding	principal1	13	-1	98891040	8445
ENSMUSG00000101786	transcribed_unprocessed_pseudogene	Gm28840	ENSMUST00000187128	processed_transcript		Y	-1	70812605	975
ENSMUSG00000054446	protein_coding	Cpa1	ENSMUST00000139004	retained_intron		6	1	30640341	716
ENSMUSG00000028016	protein_coding	Ints12	ENSMUST00000160036	retained_intron		3	1	133091938	5386
ENSMUSG00000047759	protein_coding	Hs3st3a1	ENSMUST00000058652	protein_coding	principal1	11	1	64435332	3939
ENSMUSG00000064061	protein_coding	Dzip3	ENSMUST00000147358	retained_intron		16	-1	48938674	3021
ENSMUSG00000101786	transcribed_unprocessed_pseudogene	Gm28840	ENSMUST00000185850	processed_transcript		Y	-1	70812518	120
ENSMUSG00000006423	protein_coding	C330007P06Rik	ENSMUST00000143544	processed_transcript		X	-1	36864173	579
ENSMUSG00000025995	protein_coding	Wdr75	ENSMUST00000135662	retained_intron		1	1	45814678	2076
ENSMUSG00000101786	transcribed_unprocessed_pseudogene	Gm28840	ENSMUST00000191595	processed_transcript		Y	-1	70812522	655
ENSMUSG00000006423	protein_coding	C330007P06Rik	ENSMUST00000150873	retained_intron		X	-1	36864155	678
ENSMUSG00000028016	protein_coding	Ints12	ENSMUST00000160669	processed_transcript		3	1	133100387	728
ENSMUSG00000021484	protein_coding	Lman2	ENSMUST00000021940	protein_coding	principal1	13	-1	55362783	4315
ENSMUSG00000025995	protein_coding	Wdr75	ENSMUST00000186308	retained_intron		1	1	45822265	628
ENSMUSG00000021061	protein_coding	Sptb	ENSMUST00000170532	retained_intron		12	-1	76584086	532
ENSMUSG00000006423	protein_coding	C330007P06Rik	ENSMUST00000127966	retained_intron		X	-1	36857012	3873
ENSMUSG00000025995	protein_coding	Wdr75	ENSMUST00000186651	protein_coding		1	1	45822558	412
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000150077	processed_transcript		4	1	139192969	1559
ENSMUSG00000101786	transcribed_unprocessed_pseudogene	Gm28840	ENSMUST00000191421	processed_transcript		Y	-1	70810567	327
ENSMUSG00000021484	protein_coding	Lman2	ENSMUST00000224517	retained_intron		13	-1	55348656	787
ENSMUSG00000081756	processed_pseudogene	Gm12291	ENSMUST00000121627	processed_pseudogene		11	-1	64760027	311
ENSMUSG00000101786	transcribed_unprocessed_pseudogene	Gm28840	ENSMUST00000190021	processed_transcript		Y	-1	70812548	256
ENSMUSG00000021061	protein_coding	Sptb	ENSMUST00000166101	protein_coding	alternative2	12	-1	76710023	8084
ENSMUSG00000021484	protein_coding	Lman2	ENSMUST00000225066	retained_intron		13	-1	55351514	645
ENSMUSG00000118040	lincRNA	Gm36602	ENSMUST00000238131	lincRNA		19	-1	46666126	2621
ENSMUSG00000006423	protein_coding	C330007P06Rik	ENSMUST00000115248	protein_coding	principal1	X	-1	36864246	3340
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000030518	protein_coding	alternative1	4	1	139193996	1390
ENSMUSG00000101786	transcribed_unprocessed_pseudogene	Gm28840	ENSMUST00000189110	processed_transcript		Y	-1	70812548	543
ENSMUSG00000052942	protein_coding	Glis3	ENSMUST00000162022	protein_coding	principal2	19	-1	28680077	7514
ENSMUSG00000021484	protein_coding	Lman2	ENSMUST00000225366	retained_intron		13	-1	55362611	3331
ENSMUSG00000009470	protein_coding	Tnpo1	ENSMUST00000109401	protein_coding		13	-1	98926384	8453
ENSMUSG00000101786	transcribed_unprocessed_pseudogene	Gm28840	ENSMUST00000186884	processed_transcript		Y	-1	70810567	229
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000156760	retained_intron		4	1	139194111	632
ENSMUSG00000101786	transcribed_unprocessed_pseudogene	Gm28840	ENSMUST00000189320	transcribed_unprocessed_pseudogene		Y	-1	70811004	615
ENSMUSG00000086490	lincRNA	Gm12292	ENSMUST00000122911	lincRNA		11	-1	64843753	2433
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000140079	protein_coding	principal1	1	1	6487231	5892
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000145368	protein_coding		4	1	139199267	388
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000165534	processed_transcript		7	-1	133123348	1355
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000166400	processed_transcript		7	-1	133123472	1320
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000138045	protein_coding		4	1	139226961	730
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000163601	protein_coding		7	-1	133123346	844
ENSMUSG00000048371	protein_coding	Pdp2	ENSMUST00000059588	protein_coding	principal1	8	1	104591451	5692
ENSMUSG00000023159	protein_coding	Psg29	ENSMUST00000075934	protein_coding	principal1	7	1	17203477	5445
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000171727	processed_transcript		7	-1	133112699	803
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000042675	protein_coding		4	1	139233383	1604
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000164739	processed_transcript		7	-1	133030116	800
ENSMUSG00000009470	protein_coding	Tnpo1	ENSMUST00000224099	retained_intron		13	-1	98870323	2265
ENSMUSG00000028745	protein_coding	Capzb	ENSMUST00000132385	processed_transcript		4	1	139288946	498
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000131494	protein_coding	principal1	1	1	6487331	5720
ENSMUSG00000081141	processed_pseudogene	Gm11501	ENSMUST00000118039	processed_pseudogene		11	-1	92793279	581
ENSMUSG00000009470	protein_coding	Tnpo1	ENSMUST00000179301	protein_coding		13	-1	98890998	2503
ENSMUSG00000013878	protein_coding	Rnf170	ENSMUST00000014022	protein_coding	principal2	8	1	26119368	3929
ENSMUSG00000013878	protein_coding	Rnf170	ENSMUST00000209300	protein_coding		8	1	26119375	1881
ENSMUSG00000030030	protein_coding	1700003E16Rik	ENSMUST00000032106	protein_coding	principal1	6	1	83156404	2020
ENSMUSG00000099689	protein_coding	Zfp383	ENSMUST00000187028	nonsense_mediated_decay		7	1	29908223	3208
ENSMUSG00000009470	protein_coding	Tnpo1	ENSMUST00000224022	retained_intron		13	-1	98926354	3128
ENSMUSG00000096965	lincRNA	3300005D01Rik	ENSMUST00000180924	lincRNA		17	1	5798657	428
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000113861	protein_coding		16	1	95257558	3385
ENSMUSG00000009470	protein_coding	Tnpo1	ENSMUST00000179271	protein_coding		13	-1	98891014	614
ENSMUSG00000096965	lincRNA	3300005D01Rik	ENSMUST00000180902	lincRNA		17	1	5798699	500
ENSMUSG00000099689	protein_coding	Zfp383	ENSMUST00000186475	protein_coding	principal1	7	1	29908517	2614
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000164896	processed_transcript		7	-1	133123770	930
ENSMUSG00000030030	protein_coding	1700003E16Rik	ENSMUST00000203203	protein_coding		6	1	83156501	2070
ENSMUSG00000031506	protein_coding	Ptpn7	ENSMUST00000187985	protein_coding	principal1	1	1	135132700	1990
ENSMUSG00000108389	TEC	Gm45206	ENSMUST00000206885	TEC		7	1	80209394	2285
ENSMUSG00000019810	protein_coding	Fuca2	ENSMUST00000060212	protein_coding	principal1	10	1	13501001	2007
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000167218	protein_coding		7	-1	133122615	659
ENSMUSG00000083669	processed_pseudogene	Mif-ps	ENSMUST00000121822	processed_pseudogene		7	-1	29965565	348
ENSMUSG00000096965	lincRNA	3300005D01Rik	ENSMUST00000181484	lincRNA		17	1	5799491	1174
ENSMUSG00000081696	processed_pseudogene	Gm12717	ENSMUST00000118427	processed_pseudogene		4	1	103940959	983
ENSMUSG00000013878	protein_coding	Rnf170	ENSMUST00000124757	nonsense_mediated_decay		8	1	26119380	1297
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000170459	protein_coding		7	-1	133123425	762
ENSMUSG00000026939	protein_coding	Tmem141	ENSMUST00000028308	protein_coding		2	-1	25621985	769
ENSMUSG00000096965	lincRNA	3300005D01Rik	ENSMUST00000181392	lincRNA		17	1	5799652	524
ENSMUSG00000080913	processed_pseudogene	Gm12719	ENSMUST00000118859	processed_pseudogene		4	-1	103939541	241
ENSMUSG00000059201	protein_coding	Lep	ENSMUST00000069789	protein_coding	principal1	6	1	29060220	3259
ENSMUSG00000013878	protein_coding	Rnf170	ENSMUST00000153528	protein_coding	alternative2	8	1	26119383	1026
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000043578	protein_coding	principal1	1	1	6730051	5862
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000171882	protein_coding		7	-1	133124354	557
ENSMUSG00000019810	protein_coding	Fuca2	ENSMUST00000121465	protein_coding	principal1	10	1	13501001	5741
ENSMUSG00000114229	processed_pseudogene	Gm47072	ENSMUST00000225745	processed_pseudogene		13	-1	56030234	929
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000155996	protein_coding		7	-1	133111791	308
ENSMUSG00000068120	processed_pseudogene	Gm10231	ENSMUST00000181584	processed_pseudogene		17	-1	5816640	441
ENSMUSG00000059201	protein_coding	Lep	ENSMUST00000169505	protein_coding		6	1	29065462	420
ENSMUSG00000031506	protein_coding	Ptpn7	ENSMUST00000049449	protein_coding	principal1	1	1	135132725	3261
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000139756	protein_coding		1	1	6730053	435
ENSMUSG00000019810	protein_coding	Fuca2	ENSMUST00000150048	retained_intron		10	1	13501084	1150
ENSMUSG00000099806	unprocessed_pseudogene	Gm28841	ENSMUST00000191284	unprocessed_pseudogene		Y	-1	70847951	695
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000171022	protein_coding		7	-1	133123312	598
ENSMUSG00000019810	protein_coding	Fuca2	ENSMUST00000166466	processed_transcript		10	1	13506037	786
ENSMUSG00000028519	protein_coding	Dab1	ENSMUST00000143294	processed_transcript		4	1	103619359	1295
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000131467	protein_coding		1	1	6730070	585
ENSMUSG00000067768	protein_coding	Xlr4b	ENSMUST00000069077	protein_coding	principal1	X	1	73214349	1200
ENSMUSG00000013878	protein_coding	Rnf170	ENSMUST00000209707	protein_coding		8	1	26119388	1000
ENSMUSG00000110307	processed_pseudogene	Gm3816	ENSMUST00000209803	processed_pseudogene		7	1	11560389	433
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000171968	protein_coding		7	-1	133123856	628
ENSMUSG00000031506	protein_coding	Ptpn7	ENSMUST00000188478	retained_intron		1	1	135133308	3740
ENSMUSG00000062040	protein_coding	Zfp27	ENSMUST00000162592	protein_coding	principal1	7	-1	29906572	3845
ENSMUSG00000099704	lincRNA	Gm28842	ENSMUST00000190289	lincRNA		Y	1	70890698	1499
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000168762	processed_transcript		7	-1	133123856	622
ENSMUSG00000107127	processed_pseudogene	Gm6719	ENSMUST00000202067	processed_pseudogene		6	-1	25977081	335
ENSMUSG00000026939	protein_coding	Tmem141	ENSMUST00000142087	protein_coding	principal1	2	-1	25622005	795
ENSMUSG00000104465	sense_intronic	BC002189	ENSMUST00000195674	sense_intronic		3	1	19685971	598
ENSMUSG00000099704	lincRNA	Gm28842	ENSMUST00000186399	lincRNA		Y	1	70891151	438
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000150761	protein_coding	principal1	1	1	6730101	4264
ENSMUSG00000013878	protein_coding	Rnf170	ENSMUST00000110575	protein_coding		8	1	26119476	966
ENSMUSG00000031506	protein_coding	Ptpn7	ENSMUST00000167080	protein_coding	principal1	1	1	135133309	2945
ENSMUSG00000062040	protein_coding	Zfp27	ENSMUST00000161904	protein_coding	principal1	7	-1	29900488	3090
ENSMUSG00000052942	protein_coding	Glis3	ENSMUST00000159520	processed_transcript		19	-1	28326006	1569
ENSMUSG00000101383	unprocessed_pseudogene	Gm28843	ENSMUST00000189198	unprocessed_pseudogene		Y	1	70959371	678
ENSMUSG00000052125	bidirectional_promoter_lncRNA	F730043M19Rik	ENSMUST00000140105	bidirectional_promoter_lncRNA		12	-1	33147586	1551
ENSMUSG00000030970	protein_coding	Ctbp2	ENSMUST00000168238	retained_intron		7	-1	133123184	388
ENSMUSG00000109066	processed_pseudogene	Gm4585	ENSMUST00000207218	processed_pseudogene		7	-1	131674882	452
ENSMUSG00000052125	bidirectional_promoter_lncRNA	F730043M19Rik	ENSMUST00000151637	bidirectional_promoter_lncRNA		12	-1	33146909	628
ENSMUSG00000021464	protein_coding	Ror2	ENSMUST00000021918	protein_coding	principal2	13	-1	53286124	3985
ENSMUSG00000106799	lincRNA	Gm20756	ENSMUST00000201324	lincRNA		6	1	25931426	1565
ENSMUSG00000013878	protein_coding	Rnf170	ENSMUST00000110579	nonsense_mediated_decay		8	1	26119549	2496
ENSMUSG00000052125	bidirectional_promoter_lncRNA	F730043M19Rik	ENSMUST00000148740	bidirectional_promoter_lncRNA		12	-1	33147586	3312
ENSMUSG00000024953	protein_coding	Prdx5	ENSMUST00000238095	protein_coding		19	-1	6909530	679
ENSMUSG00000013878	protein_coding	Rnf170	ENSMUST00000140819	protein_coding		8	1	26119664	741
ENSMUSG00000067768	protein_coding	Xlr4b	ENSMUST00000124904	retained_intron		X	1	73214349	1744
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000113854	protein_coding	principal1	16	1	95257558	4409
ENSMUSG00000062040	protein_coding	Zfp27	ENSMUST00000053521	protein_coding	principal1	7	-1	29906104	3150
ENSMUSG00000106799	lincRNA	Gm20756	ENSMUST00000201080	lincRNA		6	1	25954485	1595
ENSMUSG00000052942	protein_coding	Glis3	ENSMUST00000065113	nonsense_mediated_decay		19	-1	28679666	3382
ENSMUSG00000110320	lincRNA	Gm31152	ENSMUST00000210319	lincRNA		7	-1	12868583	2171
ENSMUSG00000021506	protein_coding	Pitx1	ENSMUST00000021968	protein_coding	principal1	13	-1	55831425	2451
ENSMUSG00000110149	processed_pseudogene	Gm7848	ENSMUST00000210739	processed_pseudogene		7	1	11565417	718
ENSMUSG00000025578	protein_coding	Cbx8	ENSMUST00000026663	protein_coding	principal1	11	-1	119040969	3580
ENSMUSG00000094632	protein_coding	Gm10310	ENSMUST00000213667	protein_coding	principal5	10	-1	129985062	4661
ENSMUSG00000021464	protein_coding	Ror2	ENSMUST00000130235	protein_coding	alternative2	13	-1	53285549	3730
ENSMUSG00000099914	unprocessed_pseudogene	Gm28837	ENSMUST00000190397	unprocessed_pseudogene		Y	-1	71045181	696
ENSMUSG00000062040	protein_coding	Zfp27	ENSMUST00000159920	protein_coding	principal1	7	-1	29906532	3381
ENSMUSG00000100547	unprocessed_pseudogene	Gm28611	ENSMUST00000186429	unprocessed_pseudogene		Y	-1	67265183	696
ENSMUSG00000094632	protein_coding	Gm10310	ENSMUST00000095239	protein_coding	alternative2	10	-1	129984442	963
ENSMUSG00000099369	processed_pseudogene	Gm28838	ENSMUST00000186338	processed_pseudogene		Y	-1	71081785	315
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000151281	protein_coding	principal1	1	1	6730102	3533
ENSMUSG00000062040	protein_coding	Zfp27	ENSMUST00000160411	processed_transcript		7	-1	29906060	430
ENSMUSG00000089719	processed_transcript	Gm15758	ENSMUST00000161681	antisense		8	1	54708987	695
ENSMUSG00000052942	protein_coding	Glis3	ENSMUST00000162873	processed_transcript		19	-1	28300425	1323
ENSMUSG00000067768	protein_coding	Xlr4b	ENSMUST00000069103	protein_coding	principal1	X	1	73214349	1304
ENSMUSG00000013878	protein_coding	Rnf170	ENSMUST00000110573	retained_intron		8	1	26120480	561
ENSMUSG00000089719	processed_transcript	Gm15758	ENSMUST00000162822	lincRNA		8	1	54709035	596
ENSMUSG00000052125	bidirectional_promoter_lncRNA	F730043M19Rik	ENSMUST00000145769	bidirectional_promoter_lncRNA		12	-1	33147597	2010
ENSMUSG00000025578	protein_coding	Cbx8	ENSMUST00000128019	processed_transcript		11	-1	119040831	789
ENSMUSG00000062040	protein_coding	Zfp27	ENSMUST00000172448	protein_coding	principal1	7	-1	29898863	2460
ENSMUSG00000099755	unprocessed_pseudogene	Gm21114	ENSMUST00000191466	unprocessed_pseudogene		Y	-1	67339871	696
ENSMUSG00000021506	protein_coding	Pitx1	ENSMUST00000173618	protein_coding		13	-1	55836192	644
ENSMUSG00000101893	lincRNA	Gm28839	ENSMUST00000189579	lincRNA		Y	-1	71086543	2171
ENSMUSG00000052125	bidirectional_promoter_lncRNA	F730043M19Rik	ENSMUST00000144109	bidirectional_promoter_lncRNA		12	-1	33139621	428
ENSMUSG00000013878	protein_coding	Rnf170	ENSMUST00000124867	nonsense_mediated_decay		8	1	26123877	675
ENSMUSG00000052942	protein_coding	Glis3	ENSMUST00000161026	retained_intron		19	-1	28540420	2438
ENSMUSG00000052125	bidirectional_promoter_lncRNA	F730043M19Rik	ENSMUST00000172344	bidirectional_promoter_lncRNA		12	-1	33147596	357
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000139838	protein_coding		1	1	6734870	792
ENSMUSG00000052942	protein_coding	Glis3	ENSMUST00000159639	retained_intron		19	-1	28283906	349
ENSMUSG00000067768	protein_coding	Xlr4b	ENSMUST00000114506	protein_coding		X	1	73214350	667
ENSMUSG00000100442	unprocessed_pseudogene	Gm20866	ENSMUST00000187981	unprocessed_pseudogene		Y	-1	71224005	696
ENSMUSG00000025578	protein_coding	Cbx8	ENSMUST00000143831	processed_transcript		11	-1	119040911	533
ENSMUSG00000067768	protein_coding	Xlr4b	ENSMUST00000081827	protein_coding	principal1	X	1	73214432	1077
ENSMUSG00000052942	protein_coding	Glis3	ENSMUST00000112612	protein_coding	alternative2	19	-1	28680077	3016
ENSMUSG00000109850	protein_coding	Gm45692	ENSMUST00000131138	protein_coding	principal1	8	1	26119534	557
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000132207	nonsense_mediated_decay		1	1	6802791	684
ENSMUSG00000101518	unprocessed_pseudogene	Gm20868	ENSMUST00000190110	unprocessed_pseudogene		Y	-1	71298649	693
ENSMUSG00000026939	protein_coding	Tmem141	ENSMUST00000150165	processed_transcript		2	-1	25621963	975
ENSMUSG00000052942	protein_coding	Glis3	ENSMUST00000159178	protein_coding		19	-1	28666685	1281
ENSMUSG00000035547	protein_coding	Capn5	ENSMUST00000040971	protein_coding	principal1	7	-1	98178274	4498
ENSMUSG00000110024	unprocessed_pseudogene	Gm7210	ENSMUST00000209309	unprocessed_pseudogene		7	-1	11594194	1067
ENSMUSG00000067768	protein_coding	Xlr4b	ENSMUST00000127701	processed_transcript		X	1	73217350	677
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000142304	processed_transcript		1	1	6817600	445
ENSMUSG00000028218	protein_coding	Fam92a	ENSMUST00000108285	protein_coding	principal3	4	-1	12172015	1639
ENSMUSG00000026939	protein_coding	Tmem141	ENSMUST00000128149	processed_transcript		2	-1	25621780	583
ENSMUSG00000067768	protein_coding	Xlr4b	ENSMUST00000142237	processed_transcript		X	1	73218363	597
ENSMUSG00000052942	protein_coding	Glis3	ENSMUST00000160376	processed_transcript		19	-1	28678690	740
ENSMUSG00000052942	protein_coding	Glis3	ENSMUST00000161328	protein_coding		19	-1	28678690	948
ENSMUSG00000101686	transcribed_unprocessed_pseudogene	Gm29633	ENSMUST00000187737	processed_transcript		Y	-1	67367539	675
ENSMUSG00000026939	protein_coding	Tmem141	ENSMUST00000132348	processed_transcript		2	-1	25621968	229
ENSMUSG00000026939	protein_coding	Tmem141	ENSMUST00000136952	processed_transcript		2	-1	25621971	249
ENSMUSG00000060913	protein_coding	Trim55	ENSMUST00000029139	protein_coding	principal1	3	1	19644474	2595
ENSMUSG00000060397	protein_coding	Zfp128	ENSMUST00000081891	retained_intron		7	1	12881177	2506
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000151015	processed_transcript		1	1	6827897	817
ENSMUSG00000101686	transcribed_unprocessed_pseudogene	Gm29633	ENSMUST00000188751	processed_transcript		Y	-1	67370997	120
ENSMUSG00000114220	antisense	Gm10353	ENSMUST00000225181	antisense		19	-1	8940864	642
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000130338	protein_coding		1	1	6857341	720
ENSMUSG00000035547	protein_coding	Capn5	ENSMUST00000107112	protein_coding	principal1	7	-1	98162342	2232
ENSMUSG00000033740	protein_coding	St18	ENSMUST00000163727	protein_coding	principal1	1	1	6737575	5604
ENSMUSG00000026939	protein_coding	Tmem141	ENSMUST00000155893	processed_transcript		2	-1	25621907	335
ENSMUSG00000060913	protein_coding	Trim55	ENSMUST00000195744	processed_transcript		3	1	19644508	506
ENSMUSG00000052962	protein_coding	Mrpl35	ENSMUST00000065103	protein_coding	principal1	6	-1	71823810	3721
ENSMUSG00000097186	processed_pseudogene	Gm26595	ENSMUST00000181585	processed_pseudogene		17	1	5817472	484
ENSMUSG00000047980	protein_coding	Pate5	ENSMUST00000054175	protein_coding	principal1	9	-1	35844150	1135
ENSMUSG00000024953	protein_coding	Prdx5	ENSMUST00000025904	protein_coding	principal2	19	-1	6910106	1262
ENSMUSG00000096962	processed_pseudogene	Gm26622	ENSMUST00000180520	processed_pseudogene		17	1	5837968	298
ENSMUSG00000035547	protein_coding	Capn5	ENSMUST00000134638	processed_transcript		7	-1	98162210	668
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000113862	protein_coding		16	1	95257558	5705
ENSMUSG00000101686	transcribed_unprocessed_pseudogene	Gm29633	ENSMUST00000190523	processed_transcript		Y	-1	67371083	737
ENSMUSG00000078317	protein_coding	F8a	ENSMUST00000105111	protein_coding	principal1	X	1	73228291	2505
ENSMUSG00000059975	protein_coding	Zfp74	ENSMUST00000108212	protein_coding		7	-1	29943755	2060
ENSMUSG00000035547	protein_coding	Capn5	ENSMUST00000155056	protein_coding		7	-1	98164962	382
ENSMUSG00000005355	protein_coding	Casp14	ENSMUST00000005488	protein_coding	principal1	10	-1	78718294	2336
ENSMUSG00000026027	protein_coding	Stradb	ENSMUST00000123965	retained_intron		1	1	58973522	1978
ENSMUSG00000024953	protein_coding	Prdx5	ENSMUST00000149261	protein_coding	alternative2	19	-1	6908301	755
ENSMUSG00000101686	transcribed_unprocessed_pseudogene	Gm29633	ENSMUST00000186906	processed_transcript		Y	-1	67369035	327
ENSMUSG00000052934	protein_coding	Fbxo31	ENSMUST00000059018	protein_coding	principal2	8	-1	121578806	4358
ENSMUSG00000052962	protein_coding	Mrpl35	ENSMUST00000205435	nonsense_mediated_decay		6	-1	71823763	707
ENSMUSG00000101686	transcribed_unprocessed_pseudogene	Gm29633	ENSMUST00000185572	processed_transcript		Y	-1	67371026	255
ENSMUSG00000026027	protein_coding	Stradb	ENSMUST00000147637	retained_intron		1	1	58973522	3076
ENSMUSG00000098705	processed_transcript	Gm3428	ENSMUST00000192304	TEC		9	-1	35849936	2082
ENSMUSG00000024953	protein_coding	Prdx5	ENSMUST00000173091	protein_coding		19	-1	6909617	501
ENSMUSG00000059975	protein_coding	Zfp74	ENSMUST00000108211	protein_coding		7	-1	29954087	1278
ENSMUSG00000052962	protein_coding	Mrpl35	ENSMUST00000205758	processed_transcript		6	-1	71826969	522
ENSMUSG00000035547	protein_coding	Capn5	ENSMUST00000129430	protein_coding		7	-1	98165441	440
ENSMUSG00000113059	processed_pseudogene	Gm46344	ENSMUST00000220530	processed_pseudogene		12	-1	26486791	887
ENSMUSG00000101686	transcribed_unprocessed_pseudogene	Gm29633	ENSMUST00000191172	processed_transcript		Y	-1	67371027	543
ENSMUSG00000005355	protein_coding	Casp14	ENSMUST00000219237	protein_coding	principal1	10	-1	78717406	2200
ENSMUSG00000059975	protein_coding	Zfp74	ENSMUST00000108205	protein_coding	principal1	7	-1	29951893	3711
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000037154	protein_coding		16	1	95257558	5089
ENSMUSG00000037214	protein_coding	Thap1	ENSMUST00000036807	protein_coding	principal1	8	1	26158141	2295
ENSMUSG00000060397	protein_coding	Zfp128	ENSMUST00000144578	protein_coding	principal1	7	1	12881177	3834
ENSMUSG00000052934	protein_coding	Fbxo31	ENSMUST00000180979	processed_transcript		8	-1	121559099	919
ENSMUSG00000101686	transcribed_unprocessed_pseudogene	Gm29633	ENSMUST00000189561	processed_transcript		Y	-1	67371004	202
ENSMUSG00000098705	processed_transcript	Gm3428	ENSMUST00000214488	lincRNA		9	-1	35850253	1020
ENSMUSG00000059975	protein_coding	Zfp74	ENSMUST00000149793	processed_transcript		7	-1	29954089	359
ENSMUSG00000101686	transcribed_unprocessed_pseudogene	Gm29633	ENSMUST00000186217	transcribed_unprocessed_pseudogene		Y	-1	67369472	615
ENSMUSG00000113524	lincRNA	Gm47847	ENSMUST00000223018	lincRNA		12	1	26597259	712
ENSMUSG00000097749	processed_transcript	Gm16938	ENSMUST00000205893	processed_transcript		7	1	98177194	372
ENSMUSG00000059975	protein_coding	Zfp74	ENSMUST00000032797	protein_coding	principal1	7	-1	29943505	2040
ENSMUSG00000098705	processed_transcript	Gm3428	ENSMUST00000183450	lincRNA		9	-1	35849880	521
ENSMUSG00000028218	protein_coding	Fam92a	ENSMUST00000087052	protein_coding	alternative2	4	-1	12171995	1292
ENSMUSG00000109694	processed_pseudogene	Gm45500	ENSMUST00000211676	processed_pseudogene		7	-1	11600038	803
ENSMUSG00000073125	protein_coding	Xlr3b	ENSMUST00000137641	retained_intron		X	1	73192207	3780
ENSMUSG00000052934	protein_coding	Fbxo31	ENSMUST00000180539	retained_intron		8	-1	121559963	845
ENSMUSG00000113628	lincRNA	1700020D12Rik	ENSMUST00000221140	lincRNA		12	-1	26602309	426
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000113855	protein_coding	principal1	16	1	95257558	5128
ENSMUSG00000098705	processed_transcript	Gm3428	ENSMUST00000184555	lincRNA		9	-1	35849932	416
ENSMUSG00000037214	protein_coding	Thap1	ENSMUST00000130231	protein_coding		8	1	26158233	880
ENSMUSG00000028218	protein_coding	Fam92a	ENSMUST00000172728	processed_transcript		4	-1	12161124	474
ENSMUSG00000109105	TEC	Gm44873	ENSMUST00000208490	TEC		7	1	29926978	3428
ENSMUSG00000052934	protein_coding	Fbxo31	ENSMUST00000212985	protein_coding	alternative2	8	-1	121578747	606
ENSMUSG00000073125	protein_coding	Xlr3b	ENSMUST00000138149	retained_intron		X	1	73192211	2384
ENSMUSG00000106742	processed_pseudogene	Gm42474	ENSMUST00000201073	processed_pseudogene		6	1	26830417	505
ENSMUSG00000028218	protein_coding	Fam92a	ENSMUST00000154416	protein_coding	alternative2	4	-1	12171168	648
ENSMUSG00000063623	transcribed_unprocessed_pseudogene	C230062I16Rik	ENSMUST00000077142	retained_intron		7	1	29953621	2372
ENSMUSG00000103901	TEC	Gm37499	ENSMUST00000194683	TEC		2	1	14149820	3478
ENSMUSG00000052934	protein_coding	Fbxo31	ENSMUST00000181663	processed_transcript		8	-1	121578790	799
ENSMUSG00000097749	processed_transcript	Gm16938	ENSMUST00000180517	processed_transcript		7	1	98177241	464
ENSMUSG00000037214	protein_coding	Thap1	ENSMUST00000127536	retained_intron		8	1	26158255	582
ENSMUSG00000028218	protein_coding	Fam92a	ENSMUST00000126012	nonsense_mediated_decay		4	-1	12171871	721
ENSMUSG00000054200	protein_coding	Ffar4	ENSMUST00000067098	protein_coding	principal1	19	1	38097071	1401
ENSMUSG00000037214	protein_coding	Thap1	ENSMUST00000209926	processed_transcript		8	1	26158793	396
ENSMUSG00000110547	antisense	Gm29773	ENSMUST00000212751	antisense		8	1	123896273	1895
ENSMUSG00000052681	protein_coding	Rap1b	ENSMUST00000064667	protein_coding	principal1	10	-1	117846035	2724
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000125847	protein_coding		16	1	95257659	363
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000134166	protein_coding		16	1	95257659	784
ENSMUSG00000098109	TEC	9530085P06Rik	ENSMUST00000182121	TEC		8	-1	121857603	827
ENSMUSG00000028218	protein_coding	Fam92a	ENSMUST00000126808	retained_intron		4	-1	12171995	3584
ENSMUSG00000110673	lincRNA	Gm45833	ENSMUST00000211931	lincRNA		8	-1	121674088	2730
ENSMUSG00000028218	protein_coding	Fam92a	ENSMUST00000152219	retained_intron		4	-1	12171734	605
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000140222	protein_coding		16	1	95257683	751
ENSMUSG00000052681	protein_coding	Rap1b	ENSMUST00000220214	nonsense_mediated_decay		10	-1	117818540	473
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000113859	protein_coding		16	1	95258036	5046
ENSMUSG00000028218	protein_coding	Fam92a	ENSMUST00000177837	protein_coding	alternative2	4	-1	12172015	1325
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000152516	protein_coding		16	1	95258191	318
ENSMUSG00000026940	protein_coding	Ccdc183	ENSMUST00000028309	protein_coding	principal1	2	-1	25617678	1719
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000113858	protein_coding	principal1	16	1	95258289	2576
ENSMUSG00000031821	protein_coding	Gins2	ENSMUST00000146526	retained_intron		8	-1	120588980	3662
ENSMUSG00000030930	protein_coding	Chst15	ENSMUST00000077472	protein_coding	principal1	7	-1	132316714	5041
ENSMUSG00000036403	protein_coding	Cep135	ENSMUST00000130651	retained_intron		5	1	76588698	5629
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000138329	protein_coding		16	1	95279193	356
ENSMUSG00000036528	protein_coding	Ppfibp2	ENSMUST00000207852	retained_intron		7	1	107595207	4897
ENSMUSG00000030930	protein_coding	Chst15	ENSMUST00000080215	protein_coding	principal1	7	-1	132317228	4813
ENSMUSG00000026940	protein_coding	Ccdc183	ENSMUST00000129520	processed_transcript		2	-1	25617659	2958
ENSMUSG00000028018	protein_coding	Gstcd	ENSMUST00000029651	protein_coding	principal1	3	-1	133091825	3503
ENSMUSG00000030930	protein_coding	Chst15	ENSMUST00000132508	processed_transcript		7	-1	132278625	348
ENSMUSG00000062609	protein_coding	Kcnj15	ENSMUST00000113856	protein_coding	principal1	16	1	95257651	5129
ENSMUSG00000027236	protein_coding	Eif3j1	ENSMUST00000028668	protein_coding	principal1	2	1	122028546	5413
ENSMUSG00000030930	protein_coding	Chst15	ENSMUST00000207068	processed_transcript		7	-1	132316277	1366
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000144931	processed_transcript		2	1	135659011	1366
ENSMUSG00000116716	antisense	Gm49643	ENSMUST00000232622	antisense		16	-1	95301661	699
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000139480	processed_transcript		2	1	135659554	1186
ENSMUSG00000027236	protein_coding	Eif3j1	ENSMUST00000142747	processed_transcript		2	1	122028652	594
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000146018	retained_intron		2	1	135659615	613
ENSMUSG00000028018	protein_coding	Gstcd	ENSMUST00000080583	protein_coding	principal1	3	-1	133092033	2394
ENSMUSG00000031821	protein_coding	Gins2	ENSMUST00000034278	protein_coding	principal1	8	-1	120589304	3900
ENSMUSG00000063623	transcribed_unprocessed_pseudogene	C230062I16Rik	ENSMUST00000239012	processed_transcript		7	1	29953663	809
ENSMUSG00000116720	antisense	Gm31641	ENSMUST00000232091	antisense		16	-1	95259702	2370
ENSMUSG00000019726	protein_coding	Lyst	ENSMUST00000223053	retained_intron		13	1	13590397	2706
ENSMUSG00000116720	antisense	Gm31641	ENSMUST00000232605	antisense		16	-1	95355676	492
ENSMUSG00000063623	transcribed_unprocessed_pseudogene	C230062I16Rik	ENSMUST00000207746	processed_transcript		7	1	29953738	1081
ENSMUSG00000031821	protein_coding	Gins2	ENSMUST00000155609	retained_intron		8	-1	120586208	511
ENSMUSG00000048528	protein_coding	Nkx1-2	ENSMUST00000054562	protein_coding	principal1	7	-1	132599637	3264
ENSMUSG00000100380	unprocessed_pseudogene	Gm17867	ENSMUST00000188981	unprocessed_pseudogene		1	-1	147506042	391
ENSMUSG00000028018	protein_coding	Gstcd	ENSMUST00000160402	retained_intron		3	-1	133005677	639
ENSMUSG00000063623	transcribed_unprocessed_pseudogene	C230062I16Rik	ENSMUST00000208342	processed_transcript		7	1	29956340	643
ENSMUSG00000063623	transcribed_unprocessed_pseudogene	C230062I16Rik	ENSMUST00000239047	processed_transcript		7	1	29956386	2933
ENSMUSG00000031821	protein_coding	Gins2	ENSMUST00000126094	processed_transcript		8	-1	120589034	473
ENSMUSG00000103830	TEC	Gm37609	ENSMUST00000191778	TEC		8	1	121140943	678
ENSMUSG00000110631	lincRNA	Gm42047	ENSMUST00000212158	lincRNA		8	1	121833247	1862
ENSMUSG00000063623	transcribed_unprocessed_pseudogene	C230062I16Rik	ENSMUST00000208015	processed_transcript		7	1	29956526	648
ENSMUSG00000110631	lincRNA	Gm42047	ENSMUST00000212899	lincRNA		8	1	121833653	4988
ENSMUSG00000063623	transcribed_unprocessed_pseudogene	C230062I16Rik	ENSMUST00000238888	transcribed_unprocessed_pseudogene		7	1	29957002	1648
ENSMUSG00000110658	processed_pseudogene	Gm45857	ENSMUST00000212207	processed_pseudogene		8	-1	122597254	356
ENSMUSG00000073125	protein_coding	Xlr3b	ENSMUST00000101486	protein_coding	principal1	X	1	73192222	1564
ENSMUSG00000031790	protein_coding	Mmp15	ENSMUST00000034243	protein_coding	principal1	8	1	95352268	5135
ENSMUSG00000039960	protein_coding	Rhou	ENSMUST00000136615	retained_intron		8	1	123653929	782
ENSMUSG00000113429	lincRNA	Gm20063	ENSMUST00000220757	lincRNA		12	-1	61521820	1089
ENSMUSG00000028018	protein_coding	Gstcd	ENSMUST00000161577	processed_transcript		3	-1	133091747	1975
ENSMUSG00000028018	protein_coding	Gstcd	ENSMUST00000162926	retained_intron		3	-1	133091778	1927
ENSMUSG00000031790	protein_coding	Mmp15	ENSMUST00000212235	retained_intron		8	1	95369871	426
ENSMUSG00000028018	protein_coding	Gstcd	ENSMUST00000197381	retained_intron		3	-1	133083128	1704
ENSMUSG00000105217	TEC	Gm42873	ENSMUST00000196110	TEC		3	-1	133054270	1726
ENSMUSG00000083188	polymorphic_pseudogene	Olfr404-ps1	ENSMUST00000121065	polymorphic_pseudogene	principal1	11	1	74239566	972
ENSMUSG00000104787	processed_pseudogene	Gm19148	ENSMUST00000197045	processed_pseudogene		3	1	133029423	429
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000155607	retained_intron		17	-1	25115907	3358
ENSMUSG00000105259	TEC	Gm42874	ENSMUST00000198888	TEC		3	-1	133052395	1774
ENSMUSG00000043157	protein_coding	Arl11	ENSMUST00000055159	protein_coding	principal1	14	1	61309753	1482
ENSMUSG00000039960	protein_coding	Rhou	ENSMUST00000045487	protein_coding	principal1	8	1	123653929	3371
ENSMUSG00000003660	protein_coding	Snrnp200	ENSMUST00000142327	retained_intron		2	1	127208386	2923
ENSMUSG00000043157	protein_coding	Arl11	ENSMUST00000224727	protein_coding	principal1	14	1	61309834	2095
ENSMUSG00000048478	protein_coding	Spata33	ENSMUST00000212760	protein_coding		8	1	123212832	4074
ENSMUSG00000056457	protein_coding	Prl2c3	ENSMUST00000099805	protein_coding	principal1	13	-1	12800079	857
ENSMUSG00000021902	protein_coding	Phf7	ENSMUST00000226565	protein_coding		14	-1	31251315	1971
ENSMUSG00000048478	protein_coding	Spata33	ENSMUST00000212523	protein_coding		8	1	123212840	486
ENSMUSG00000056457	protein_coding	Prl2c3	ENSMUST00000222621	retained_intron		13	-1	12792340	631
ENSMUSG00000048478	protein_coding	Spata33	ENSMUST00000212892	protein_coding		8	1	123212870	2940
ENSMUSG00000048478	protein_coding	Spata33	ENSMUST00000212161	protein_coding		8	1	123212876	2941
ENSMUSG00000101505	antisense	1700109G14Rik	ENSMUST00000190737	antisense		14	-1	61305334	801
ENSMUSG00000056457	protein_coding	Prl2c3	ENSMUST00000222139	protein_coding		13	-1	12800068	669
ENSMUSG00000101505	antisense	1700109G14Rik	ENSMUST00000188538	antisense		14	-1	61318146	754
ENSMUSG00000056457	protein_coding	Prl2c3	ENSMUST00000223098	protein_coding		13	-1	12798374	449
ENSMUSG00000101505	antisense	1700109G14Rik	ENSMUST00000186084	antisense		14	-1	61305308	484
ENSMUSG00000056457	protein_coding	Prl2c3	ENSMUST00000223180	retained_intron		13	-1	12800050	351
ENSMUSG00000019905	protein_coding	Gprc6a	ENSMUST00000020062	protein_coding	principal2	10	-1	51631458	2856
ENSMUSG00000030539	protein_coding	Sema4b	ENSMUST00000032754	protein_coding	principal1	7	1	80186841	3949
ENSMUSG00000108560	TEC	Gm44695	ENSMUST00000205567	TEC		7	1	75484861	1631
ENSMUSG00000109969	protein_coding	Zscan4-ps3	ENSMUST00000210559	protein_coding	principal1	7	1	11609308	2277
ENSMUSG00000048478	protein_coding	Spata33	ENSMUST00000060133	protein_coding	principal2	8	1	123212884	491
ENSMUSG00000108557	TEC	Gm44835	ENSMUST00000205544	TEC		7	1	75560614	3181
ENSMUSG00000019905	protein_coding	Gprc6a	ENSMUST00000219286	protein_coding		10	-1	51631431	2574
ENSMUSG00000099457	unprocessed_pseudogene	Gm21794	ENSMUST00000187056	unprocessed_pseudogene		Y	-1	67406409	696
ENSMUSG00000015305	protein_coding	Sash1	ENSMUST00000015449	protein_coding	principal1	10	-1	8886070	7183
ENSMUSG00000108542	TEC	Gm44834	ENSMUST00000206671	TEC		7	1	75481999	1396
ENSMUSG00000108633	TEC	Gm44694	ENSMUST00000205317	TEC		7	1	75707885	1298
ENSMUSG00000019905	protein_coding	Gprc6a	ENSMUST00000218684	protein_coding	alternative2	10	-1	51631461	2292
ENSMUSG00000048478	protein_coding	Spata33	ENSMUST00000212346	protein_coding		8	1	123212896	715
ENSMUSG00000015937	protein_coding	Macroh2a1	ENSMUST00000016081	protein_coding	principal3	13	-1	56135631	2046
ENSMUSG00000071647	protein_coding	Eml3	ENSMUST00000096241	protein_coding	principal2	19	1	8929552	3322
ENSMUSG00000083545	TEC	Gm13320	ENSMUST00000120155	TEC		2	-1	14189763	141
ENSMUSG00000021902	protein_coding	Phf7	ENSMUST00000022459	protein_coding	principal1	14	-1	31251317	2084
ENSMUSG00000048478	protein_coding	Spata33	ENSMUST00000212637	protein_coding	alternative2	8	1	123212898	569
ENSMUSG00000015305	protein_coding	Sash1	ENSMUST00000212869	protein_coding		10	-1	8756761	1074
ENSMUSG00000048478	protein_coding	Spata33	ENSMUST00000212271	processed_transcript		8	1	123213253	290
ENSMUSG00000030539	protein_coding	Sema4b	ENSMUST00000107383	retained_intron		7	1	80186878	2775
ENSMUSG00000071647	protein_coding	Eml3	ENSMUST00000224272	protein_coding	alternative2	19	1	8929893	2978
ENSMUSG00000015305	protein_coding	Sash1	ENSMUST00000212553	protein_coding		10	-1	8762474	840
ENSMUSG00000030539	protein_coding	Sema4b	ENSMUST00000205822	protein_coding	principal1	7	1	80198441	3760
ENSMUSG00000071647	protein_coding	Eml3	ENSMUST00000225054	retained_intron		19	1	8934031	354
ENSMUSG00000071647	protein_coding	Eml3	ENSMUST00000224642	protein_coding		19	1	8934145	601
ENSMUSG00000093682	lincRNA	Gm20681	ENSMUST00000176061	lincRNA		8	1	122374037	503
ENSMUSG00000091952	processed_pseudogene	Gm17709	ENSMUST00000174536	processed_pseudogene		8	-1	121973822	1096
ENSMUSG00000021902	protein_coding	Phf7	ENSMUST00000226310	nonsense_mediated_decay		14	-1	31251017	1809
ENSMUSG00000030539	protein_coding	Sema4b	ENSMUST00000123023	retained_intron		7	1	80198536	1202
ENSMUSG00000015305	protein_coding	Sash1	ENSMUST00000213032	retained_intron		10	-1	8886052	1078
ENSMUSG00000071647	protein_coding	Eml3	ENSMUST00000226096	retained_intron		19	1	8938301	528
ENSMUSG00000061531	protein_coding	Tmem236	ENSMUST00000077517	protein_coding	principal1	2	1	14174523	3659
ENSMUSG00000101886	lincRNA	Gm28324	ENSMUST00000187913	lincRNA		8	1	121002927	264
ENSMUSG00000071647	protein_coding	Eml3	ENSMUST00000225377	retained_intron		19	1	8938519	668
ENSMUSG00000097597	antisense	Gm26674	ENSMUST00000180770	antisense		10	1	8884637	1446
ENSMUSG00000036403	protein_coding	Cep135	ENSMUST00000121979	protein_coding	principal1	5	1	76588701	5537
ENSMUSG00000021902	protein_coding	Phf7	ENSMUST00000228930	nonsense_mediated_decay		14	-1	31251008	1382
ENSMUSG00000111165	TEC	4930553I21Rik	ENSMUST00000214016	TEC		10	-1	8861443	580
ENSMUSG00000109626	processed_pseudogene	Gm18641	ENSMUST00000211763	processed_pseudogene		7	1	11625042	1246
ENSMUSG00000021902	protein_coding	Phf7	ENSMUST00000228437	protein_coding		14	-1	31251008	1373
ENSMUSG00000097097	lincRNA	5033426O07Rik	ENSMUST00000180796	lincRNA		8	-1	121201835	2066
ENSMUSG00000015937	protein_coding	Macroh2a1	ENSMUST00000045788	protein_coding	alternative1	13	-1	56135530	1933
ENSMUSG00000097097	lincRNA	5033426O07Rik	ENSMUST00000212635	lincRNA		8	-1	121203602	2110
ENSMUSG00000021902	protein_coding	Phf7	ENSMUST00000227668	retained_intron		14	-1	31239994	409
ENSMUSG00000036403	protein_coding	Cep135	ENSMUST00000049060	protein_coding	principal1	5	1	76591714	5313
ENSMUSG00000097783	lincRNA	Gm26747	ENSMUST00000180597	lincRNA		8	1	121421238	1716
ENSMUSG00000021902	protein_coding	Phf7	ENSMUST00000228140	retained_intron		14	-1	31251299	3761
ENSMUSG00000035829	protein_coding	Ppp1r26	ENSMUST00000128199	processed_transcript		2	1	28446800	617
ENSMUSG00000100097	lincRNA	Gm28464	ENSMUST00000188929	lincRNA		Y	1	34148855	437
ENSMUSG00000035829	protein_coding	Ppp1r26	ENSMUST00000150362	processed_transcript		2	1	28446866	646
ENSMUSG00000100097	lincRNA	Gm28464	ENSMUST00000187726	lincRNA		Y	1	34148855	622
ENSMUSG00000097336	processed_transcript	Fendrr	ENSMUST00000181530	bidirectional_promoter_lncRNA		8	-1	121083032	2380
ENSMUSG00000066979	protein_coding	Bub3	ENSMUST00000084502	protein_coding	principal2	7	1	131560222	2218
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000005256	protein_coding	principal1	15	-1	66969640	2889
ENSMUSG00000015937	protein_coding	Macroh2a1	ENSMUST00000137835	retained_intron		13	-1	56084521	728
ENSMUSG00000035829	protein_coding	Ppp1r26	ENSMUST00000154081	processed_transcript		2	1	28447941	624
ENSMUSG00000097336	processed_transcript	Fendrr	ENSMUST00000181231	lincRNA		8	-1	121060413	1092
ENSMUSG00000097336	processed_transcript	Fendrr	ENSMUST00000182264	bidirectional_promoter_lncRNA		8	-1	121083110	2410
ENSMUSG00000015937	protein_coding	Macroh2a1	ENSMUST00000141589	retained_intron		13	-1	56090058	600
ENSMUSG00000110684	lincRNA	Gm45866	ENSMUST00000212425	lincRNA		8	1	123754370	326
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000165966	retained_intron		15	-1	66934469	849
ENSMUSG00000095762	processed_pseudogene	Gm16378	ENSMUST00000179168	processed_pseudogene		8	1	122841731	342
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000047865	protein_coding		18	1	82475162	2492
ENSMUSG00000035829	protein_coding	Ppp1r26	ENSMUST00000040324	protein_coding	principal1	2	1	28447941	5466
ENSMUSG00000072479	protein_coding	Xlr5b	ENSMUST00000135742	protein_coding		X	1	73148796	727
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000166420	protein_coding		15	-1	66969639	577
ENSMUSG00000066979	protein_coding	Bub3	ENSMUST00000207736	nonsense_mediated_decay		7	1	131560380	2128
ENSMUSG00000035829	protein_coding	Ppp1r26	ENSMUST00000189694	protein_coding	principal1	2	1	28447941	5463
ENSMUSG00000015087	protein_coding	Rabl6	ENSMUST00000058137	protein_coding	principal1	2	-1	25608521	3230
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000143506	nonsense_mediated_decay		18	1	82475370	433
ENSMUSG00000029642	protein_coding	Polr1d	ENSMUST00000050970	protein_coding	principal1	5	1	147077050	1196
ENSMUSG00000066979	protein_coding	Bub3	ENSMUST00000208848	retained_intron		7	1	131560391	832
ENSMUSG00000066979	protein_coding	Bub3	ENSMUST00000209131	retained_intron		7	1	131560407	4015
ENSMUSG00000060923	protein_coding	Acyp2	ENSMUST00000074613	protein_coding	principal1	11	-1	30649587	863
ENSMUSG00000063652	protein_coding	Slc22a21	ENSMUST00000076493	protein_coding	principal1	11	-1	53980332	3461
ENSMUSG00000066979	protein_coding	Bub3	ENSMUST00000207231	protein_coding		7	1	131560439	678
ENSMUSG00000072479	protein_coding	Xlr5b	ENSMUST00000114518	protein_coding	principal1	X	1	73148796	1652
ENSMUSG00000020469	protein_coding	Myl7	ENSMUST00000102921	protein_coding	principal1	11	-1	5898782	590
ENSMUSG00000042763	protein_coding	Maneal	ENSMUST00000064444	protein_coding	principal1	4	-1	124862171	2727
ENSMUSG00000083907	processed_pseudogene	Plk-ps1	ENSMUST00000119494	processed_pseudogene		5	1	35554184	1787
ENSMUSG00000082078	processed_pseudogene	Gm12098	ENSMUST00000118277	processed_pseudogene		11	-1	30568898	508
ENSMUSG00000066979	protein_coding	Bub3	ENSMUST00000208571	protein_coding		7	1	131560609	747
ENSMUSG00000081887	processed_pseudogene	Gm12097	ENSMUST00000121523	processed_pseudogene		11	-1	30574454	1414
ENSMUSG00000066979	protein_coding	Bub3	ENSMUST00000207442	protein_coding	alternative1	7	1	131560710	3414
ENSMUSG00000072479	protein_coding	Xlr5b	ENSMUST00000097221	protein_coding	principal1	X	1	73151134	864
ENSMUSG00000081712	processed_pseudogene	Gm12096	ENSMUST00000121149	processed_pseudogene		11	1	30528295	829
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000171569	retained_intron		15	-1	66969639	4049
ENSMUSG00000101313	lincRNA	Gm29219	ENSMUST00000187224	lincRNA		Y	-1	67472849	1499
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000164675	nonsense_mediated_decay		15	-1	66969639	591
ENSMUSG00000063652	protein_coding	Slc22a21	ENSMUST00000129301	processed_transcript		11	-1	53953146	939
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000168542	nonsense_mediated_decay		15	-1	66969639	473
ENSMUSG00000101313	lincRNA	Gm29219	ENSMUST00000191144	lincRNA		Y	-1	67472395	437
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000167817	protein_coding		15	-1	66948479	356
ENSMUSG00000015937	protein_coding	Macroh2a1	ENSMUST00000139511	processed_transcript		13	-1	56135530	889
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000168979	protein_coding		15	-1	66967925	583
ENSMUSG00000092489	unprocessed_pseudogene	Vmn1r-ps53	ENSMUST00000173066	unprocessed_pseudogene		7	-1	11654051	922
ENSMUSG00000015937	protein_coding	Macroh2a1	ENSMUST00000141031	retained_intron		13	-1	56135440	4018
ENSMUSG00000003037	protein_coding	Rab8a	ENSMUST00000003121	protein_coding	principal1	8	1	72161200	4550
ENSMUSG00000063652	protein_coding	Slc22a21	ENSMUST00000124221	nonsense_mediated_decay		11	-1	53979870	809
ENSMUSG00000015087	protein_coding	Rabl6	ENSMUST00000150206	processed_transcript		2	-1	25590372	3908
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000172447	nonsense_mediated_decay		15	-1	66969616	444
ENSMUSG00000100478	lincRNA	Gm29632	ENSMUST00000190335	lincRNA		Y	1	67503622	2166
ENSMUSG00000040219	protein_coding	Ttc12	ENSMUST00000055096	protein_coding	principal1	9	-1	49486225	3628
ENSMUSG00000063652	protein_coding	Slc22a21	ENSMUST00000143352	nonsense_mediated_decay		11	-1	53969603	650
ENSMUSG00000015937	protein_coding	Macroh2a1	ENSMUST00000154778	processed_transcript		13	-1	56136361	942
ENSMUSG00000017548	protein_coding	Suz12	ENSMUST00000017692	protein_coding	principal3	11	1	79993106	4373
ENSMUSG00000040298	protein_coding	Btbd16	ENSMUST00000207155	retained_intron		7	1	130774069	1111
ENSMUSG00000080768	processed_pseudogene	Gm12219	ENSMUST00000119198	processed_pseudogene		11	-1	53967505	443
ENSMUSG00000110267	processed_pseudogene	Gm45283	ENSMUST00000210593	processed_pseudogene		7	1	11660820	628
ENSMUSG00000026027	protein_coding	Stradb	ENSMUST00000114296	protein_coding		1	1	58973522	1348
ENSMUSG00000015937	protein_coding	Macroh2a1	ENSMUST00000154564	processed_transcript		13	-1	56134825	547
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000171266	nonsense_mediated_decay		15	-1	66969595	759
ENSMUSG00000067771	protein_coding	Gm14685	ENSMUST00000088459	protein_coding	principal1	X	1	73117047	2864
ENSMUSG00000113053	processed_pseudogene	Gm18262	ENSMUST00000222560	processed_pseudogene		13	1	12864124	1946
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000170903	protein_coding		15	-1	66969616	667
ENSMUSG00000114493	antisense	Gm47071	ENSMUST00000237678	antisense		13	1	55826250	2677
ENSMUSG00000101083	processed_pseudogene	Gm29631	ENSMUST00000191065	processed_pseudogene		Y	1	67508374	315
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000042345	protein_coding	principal1	18	1	35118859	3733
ENSMUSG00000029642	protein_coding	Polr1d	ENSMUST00000110557	protein_coding		5	1	147077346	1137
ENSMUSG00000033396	protein_coding	Spg11	ENSMUST00000036450	protein_coding	principal1	2	-1	122118386	7671
ENSMUSG00000003037	protein_coding	Rab8a	ENSMUST00000135613	processed_transcript		8	1	72161313	324
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000163496	protein_coding		15	-1	66967940	738
ENSMUSG00000017548	protein_coding	Suz12	ENSMUST00000132312	retained_intron		11	1	79995586	651
ENSMUSG00000114493	antisense	Gm47071	ENSMUST00000225993	antisense		13	1	56002265	2492
ENSMUSG00000100096	lincRNA	Gm28760	ENSMUST00000190376	lincRNA		13	-1	55836092	481
ENSMUSG00000003037	protein_coding	Rab8a	ENSMUST00000128203	retained_intron		8	1	72161359	542
ENSMUSG00000113117	unprocessed_pseudogene	Gm2544	ENSMUST00000222702	unprocessed_pseudogene		13	-1	12873784	756
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000236571	retained_intron		18	1	35118883	1124
ENSMUSG00000029642	protein_coding	Polr1d	ENSMUST00000200993	protein_coding		5	1	147077548	1167
ENSMUSG00000067771	protein_coding	Gm14685	ENSMUST00000179117	protein_coding	principal1	X	1	73123068	2773
ENSMUSG00000005125	protein_coding	Ndrg1	ENSMUST00000164070	protein_coding		15	-1	66969640	316
ENSMUSG00000100096	lincRNA	Gm28760	ENSMUST00000185995	lincRNA		13	-1	55836095	736
ENSMUSG00000017548	protein_coding	Suz12	ENSMUST00000148140	retained_intron		11	1	79995617	611
ENSMUSG00000054169	protein_coding	Ceacam10	ENSMUST00000038069	protein_coding	principal1	7	1	24777206	1048
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000236969	retained_intron		18	1	35118887	1656
ENSMUSG00000029642	protein_coding	Polr1d	ENSMUST00000202444	nonsense_mediated_decay		5	1	147077564	1350
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000236037	protein_coding		18	1	35118913	1453
ENSMUSG00000040219	protein_coding	Ttc12	ENSMUST00000146666	retained_intron		9	-1	49486215	1825
ENSMUSG00000091479	antisense	Gm17035	ENSMUST00000170557	antisense		15	1	66929607	419
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000237154	protein_coding		18	1	35119442	519
ENSMUSG00000081796	processed_pseudogene	Gm9005	ENSMUST00000119908	processed_pseudogene		X	-1	94547569	607
ENSMUSG00000114933	processed_pseudogene	Gm48040	ENSMUST00000225171	processed_pseudogene		14	1	40747227	1273
ENSMUSG00000017548	protein_coding	Suz12	ENSMUST00000126091	nonsense_mediated_decay		11	1	79995791	488
ENSMUSG00000029642	protein_coding	Polr1d	ENSMUST00000201007	retained_intron		5	1	147101164	363
ENSMUSG00000080887	processed_pseudogene	Gm14831	ENSMUST00000120253	processed_pseudogene		X	1	94557341	409
ENSMUSG00000054169	protein_coding	Ceacam10	ENSMUST00000206847	protein_coding		7	1	24777228	662
ENSMUSG00000095430	protein_coding	Vmn1r72	ENSMUST00000227010	protein_coding	principal1	7	-1	11680147	6279
ENSMUSG00000015087	protein_coding	Rabl6	ENSMUST00000146012	processed_transcript		2	-1	25608465	2190
ENSMUSG00000029642	protein_coding	Polr1d	ENSMUST00000196288	processed_transcript		5	1	147105366	878
ENSMUSG00000082406	processed_pseudogene	Gm5401	ENSMUST00000122444	processed_pseudogene		X	-1	94608696	365
ENSMUSG00000017548	protein_coding	Suz12	ENSMUST00000144188	nonsense_mediated_decay		11	1	80025195	553
ENSMUSG00000078982	processed_pseudogene	Gm11025	ENSMUST00000140773	processed_pseudogene		12	-1	57273312	466
ENSMUSG00000054169	protein_coding	Ceacam10	ENSMUST00000206850	nonsense_mediated_decay		7	1	24777281	750
ENSMUSG00000095430	protein_coding	Vmn1r72	ENSMUST00000209638	protein_coding	principal1	7	-1	11680147	6501
ENSMUSG00000015087	protein_coding	Rabl6	ENSMUST00000128942	processed_transcript		2	-1	25585060	312
ENSMUSG00000028519	protein_coding	Dab1	ENSMUST00000106830	protein_coding	principal1	4	1	104367590	5278
ENSMUSG00000083988	processed_pseudogene	Rps10-ps4	ENSMUST00000120308	processed_pseudogene		5	-1	147101053	492
ENSMUSG00000054169	protein_coding	Ceacam10	ENSMUST00000206380	retained_intron		7	1	24784016	641
ENSMUSG00000015087	protein_coding	Rabl6	ENSMUST00000135084	processed_transcript		2	-1	25585823	548
ENSMUSG00000017548	protein_coding	Suz12	ENSMUST00000163272	protein_coding	alternative2	11	1	79993106	4303
ENSMUSG00000095430	protein_coding	Vmn1r72	ENSMUST00000053134	protein_coding	principal1	7	-1	11670519	921
ENSMUSG00000015087	protein_coding	Rabl6	ENSMUST00000143855	processed_transcript		2	-1	25587307	600
ENSMUSG00000115011	processed_pseudogene	Gm49013	ENSMUST00000228074	processed_pseudogene		15	1	63146233	484
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000237855	nonsense_mediated_decay		18	1	35152599	2542
ENSMUSG00000015087	protein_coding	Rabl6	ENSMUST00000140778	processed_transcript		2	-1	25589159	734
ENSMUSG00000033396	protein_coding	Spg11	ENSMUST00000133145	processed_transcript		2	-1	122118296	2555
ENSMUSG00000028519	protein_coding	Dab1	ENSMUST00000106827	protein_coding		4	1	103619665	1237
ENSMUSG00000102118	unprocessed_pseudogene	Gm29637	ENSMUST00000188877	unprocessed_pseudogene		Y	1	67544885	696
ENSMUSG00000057116	protein_coding	AF366264	ENSMUST00000071308	protein_coding	principal1	8	-1	13838389	3157
ENSMUSG00000033396	protein_coding	Spg11	ENSMUST00000135847	processed_transcript		2	-1	122118375	1813
ENSMUSG00000044997	antisense	E130304I02Rik	ENSMUST00000187873	antisense		7	1	35802592	696
ENSMUSG00000113353	processed_pseudogene	Gm18878	ENSMUST00000223071	processed_pseudogene		13	-1	12881197	1443
ENSMUSG00000044997	antisense	E130304I02Rik	ENSMUST00000052454	antisense		7	1	35802593	435
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000235449	protein_coding		18	1	35214930	764
ENSMUSG00000113256	processed_pseudogene	Gm48527	ENSMUST00000222079	processed_pseudogene		13	-1	12917965	256
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000235269	protein_coding		18	1	35214956	690
ENSMUSG00000115281	TEC	Gm49743	ENSMUST00000226540	TEC		14	1	32595333	2786
ENSMUSG00000010461	protein_coding	Eya4	ENSMUST00000092665	protein_coding	principal2	10	-1	23349903	5304
ENSMUSG00000112469	lincRNA	Gm47823	ENSMUST00000218959	lincRNA		10	-1	32939685	856
ENSMUSG00000067764	protein_coding	Xlr5c	ENSMUST00000114503	protein_coding	principal1	X	-1	73292976	1656
ENSMUSG00000109883	processed_pseudogene	Gm18850	ENSMUST00000211578	processed_pseudogene		7	-1	11688216	388
ENSMUSG00000015087	protein_coding	Rabl6	ENSMUST00000140635	processed_transcript		2	-1	25608485	1165
ENSMUSG00000028519	protein_coding	Dab1	ENSMUST00000146078	nonsense_mediated_decay		4	1	104367590	2462
ENSMUSG00000107423	unprocessed_pseudogene	Gm43977	ENSMUST00000203970	unprocessed_pseudogene		10	-1	129988330	189
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000238145	retained_intron		18	1	35249373	667
ENSMUSG00000015087	protein_coding	Rabl6	ENSMUST00000140785	processed_transcript		2	-1	25608456	612
ENSMUSG00000067764	protein_coding	Xlr5c	ENSMUST00000088450	protein_coding		X	-1	73290515	540
ENSMUSG00000028519	protein_coding	Dab1	ENSMUST00000106826	protein_coding		4	1	104512073	996
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000236483	retained_intron		18	1	35250942	658
ENSMUSG00000115676	lincRNA	4930449C09Rik	ENSMUST00000226508	lincRNA		15	1	63717818	2331
ENSMUSG00000062007	protein_coding	Hsh2d	ENSMUST00000072097	protein_coding	principal1	8	1	72189638	1824
ENSMUSG00000028519	protein_coding	Dab1	ENSMUST00000143644	protein_coding		4	1	104367113	974
ENSMUSG00000096881	unprocessed_pseudogene	Gm20874	ENSMUST00000178356	unprocessed_pseudogene		Y	-1	67631468	663
ENSMUSG00000037815	protein_coding	Ctnna1	ENSMUST00000237475	retained_intron		18	1	35252321	545
ENSMUSG00000113352	lincRNA	Gm34639	ENSMUST00000222648	lincRNA		13	-1	28898676	2241
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000115715	protein_coding	alternative2	17	1	8525372	2783
ENSMUSG00000115676	lincRNA	4930449C09Rik	ENSMUST00000226839	lincRNA		15	1	63718394	1200
ENSMUSG00000115676	lincRNA	4930449C09Rik	ENSMUST00000226443	lincRNA		15	1	63735163	1528
ENSMUSG00000010461	protein_coding	Eya4	ENSMUST00000220299	protein_coding		10	-1	23350786	3615
ENSMUSG00000028519	protein_coding	Dab1	ENSMUST00000141037	processed_transcript		4	1	104591218	482
ENSMUSG00000110385	unprocessed_pseudogene	Gm19093	ENSMUST00000210671	unprocessed_pseudogene		7	1	11716716	1454
ENSMUSG00000047022	protein_coding	Mipol1	ENSMUST00000153755	retained_intron		12	1	57230427	1856
ENSMUSG00000028519	protein_coding	Dab1	ENSMUST00000149672	protein_coding		4	1	104605296	641
ENSMUSG00000113352	lincRNA	Gm34639	ENSMUST00000223473	lincRNA		13	-1	28897945	649
ENSMUSG00000115369	lincRNA	Gm49014	ENSMUST00000227423	lincRNA		15	1	63255904	622
ENSMUSG00000062007	protein_coding	Hsh2d	ENSMUST00000165324	protein_coding	principal1	8	1	72193443	1238
ENSMUSG00000044743	protein_coding	Defb10	ENSMUST00000054162	protein_coding	principal1	8	1	21858901	298
ENSMUSG00000104394	TEC	Gm37254	ENSMUST00000193542	TEC		1	1	187236457	3901
ENSMUSG00000115369	lincRNA	Gm49014	ENSMUST00000226449	lincRNA		15	1	63255953	670
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000115722	retained_intron		17	1	8525450	3673
ENSMUSG00000010461	protein_coding	Eya4	ENSMUST00000219315	protein_coding	alternative1	10	-1	23350136	3100
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000027512	protein_coding	principal3	1	1	87756013	3130
ENSMUSG00000115377	processed_pseudogene	Gm4942	ENSMUST00000227647	processed_pseudogene		15	-1	63492293	1332
ENSMUSG00000101794	lincRNA	Gm29217	ENSMUST00000191270	lincRNA		Y	-1	67682009	1498
ENSMUSG00000104245	antisense	Gm38155	ENSMUST00000192285	antisense		1	-1	187377469	2763
ENSMUSG00000010461	protein_coding	Eya4	ENSMUST00000218867	retained_intron		10	-1	23115196	2603
ENSMUSG00000115520	lincRNA	Gm41335	ENSMUST00000228339	lincRNA		15	-1	63718289	2038
ENSMUSG00000115520	lincRNA	Gm41335	ENSMUST00000227983	lincRNA		15	-1	63357019	587
ENSMUSG00000026027	protein_coding	Stradb	ENSMUST00000123301	nonsense_mediated_decay		1	1	58973522	2070
ENSMUSG00000101794	lincRNA	Gm29217	ENSMUST00000189237	lincRNA		Y	-1	67681556	437
ENSMUSG00000115520	lincRNA	Gm41335	ENSMUST00000226699	lincRNA		15	-1	63479608	629
ENSMUSG00000010461	protein_coding	Eya4	ENSMUST00000218049	protein_coding		10	-1	23237075	523
ENSMUSG00000095812	processed_pseudogene	Gm5473	ENSMUST00000179326	processed_pseudogene		15	1	63631697	642
ENSMUSG00000102627	protein_coding	Snurf	ENSMUST00000194059	protein_coding	principal1	7	-1	60005049	216
ENSMUSG00000028890	protein_coding	Mtf1	ENSMUST00000106193	protein_coding	principal1	4	1	124802104	7554
ENSMUSG00000071862	protein_coding	Lrrtm2	ENSMUST00000091636	protein_coding	principal1	18	-1	35215024	5673
ENSMUSG00000029655	protein_coding	N4bp2l2	ENSMUST00000164332	processed_transcript		5	-1	150647519	718
ENSMUSG00000099716	lincRNA	Gm29082	ENSMUST00000185207	lincRNA		Y	1	67675333	448
ENSMUSG00000108943	TEC	Gm44559	ENSMUST00000207177	TEC		7	-1	59263934	1012
ENSMUSG00000010461	protein_coding	Eya4	ENSMUST00000220038	processed_transcript		10	-1	23185606	855
ENSMUSG00000010461	protein_coding	Eya4	ENSMUST00000218956	processed_transcript		10	-1	23185566	440
ENSMUSG00000071862	protein_coding	Lrrtm2	ENSMUST00000236530	retained_intron		18	-1	35215008	2872
ENSMUSG00000000948	protein_coding	Gm38393	ENSMUST00000189432	nonsense_mediated_decay	alternative2	7	-1	60005064	539
ENSMUSG00000028890	protein_coding	Mtf1	ENSMUST00000138807	protein_coding		4	1	124802549	636
ENSMUSG00000010461	protein_coding	Eya4	ENSMUST00000074366	protein_coding		10	-1	23349887	3488
ENSMUSG00000026027	protein_coding	Stradb	ENSMUST00000153990	nonsense_mediated_decay		1	1	58973522	2534
ENSMUSG00000071862	protein_coding	Lrrtm2	ENSMUST00000236680	protein_coding		18	-1	35215024	1937
ENSMUSG00000047022	protein_coding	Mipol1	ENSMUST00000150292	retained_intron		12	1	57230434	2247
ENSMUSG00000051687	protein_coding	Vmn1r73	ENSMUST00000226516	protein_coding	principal1	7	1	11730266	6155
ENSMUSG00000028890	protein_coding	Mtf1	ENSMUST00000147452	retained_intron		4	1	124802582	781
ENSMUSG00000040298	protein_coding	Btbd16	ENSMUST00000048453	protein_coding	principal2	7	1	130774069	3434
ENSMUSG00000000948	protein_coding	Gm38393	ENSMUST00000179360	nonsense_mediated_decay	principal5	7	-1	60005064	1199
ENSMUSG00000051687	protein_coding	Vmn1r73	ENSMUST00000055070	protein_coding	principal1	7	1	11756257	912
ENSMUSG00000028890	protein_coding	Mtf1	ENSMUST00000175875	protein_coding		4	1	124802678	750
ENSMUSG00000047022	protein_coding	Mipol1	ENSMUST00000148418	retained_intron		12	1	57230436	1168
ENSMUSG00000000948	protein_coding	Gm38393	ENSMUST00000191456	processed_transcript		7	-1	59980676	3937
ENSMUSG00000040298	protein_coding	Btbd16	ENSMUST00000207219	nonsense_mediated_decay		7	1	130774139	1987
ENSMUSG00000000948	protein_coding	Gm38393	ENSMUST00000191491	processed_transcript		7	-1	59980932	333
ENSMUSG00000040298	protein_coding	Btbd16	ENSMUST00000208593	protein_coding	alternative2	7	1	130774167	1849
ENSMUSG00000028890	protein_coding	Mtf1	ENSMUST00000030723	protein_coding	principal1	4	1	124802549	7631
ENSMUSG00000085154	processed_transcript	C130046K22Rik	ENSMUST00000154471	processed_transcript		11	1	103697724	660
ENSMUSG00000109122	TEC	A230103L15Rik	ENSMUST00000207198	TEC		7	-1	59331189	3872
ENSMUSG00000039210	protein_coding	Gpatch2	ENSMUST00000097443	processed_transcript		1	1	187215508	2411
ENSMUSG00000019726	protein_coding	Lyst	ENSMUST00000110559	protein_coding	principal1	13	1	13590397	13181
ENSMUSG00000019478	protein_coding	Rab4a	ENSMUST00000118535	protein_coding	principal1	8	1	123805985	1419
ENSMUSG00000085154	processed_transcript	C130046K22Rik	ENSMUST00000129780	processed_transcript		11	1	103697724	727
ENSMUSG00000108880	TEC	Gm44560	ENSMUST00000207816	TEC		7	-1	59289166	3115
ENSMUSG00000094248	protein_coding	Hist1h2ao	ENSMUST00000091745	protein_coding	principal1	13	1	21810465	480
ENSMUSG00000113218	lincRNA	4933409F18Rik	ENSMUST00000221910	lincRNA		12	-1	26834859	1267
ENSMUSG00000050189	lincRNA	Etos1	ENSMUST00000057134	lincRNA		7	-1	130772652	2015
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000133072	retained_intron		1	1	87756056	3751
ENSMUSG00000078570	protein_coding	1110065P20Rik	ENSMUST00000184704	retained_intron		4	-1	124850330	1251
ENSMUSG00000113218	lincRNA	4933409F18Rik	ENSMUST00000222026	lincRNA		12	-1	26834873	1584
ENSMUSG00000109399	sense_intronic	Gm44982	ENSMUST00000208795	sense_intronic		7	1	131440471	471
ENSMUSG00000019478	protein_coding	Rab4a	ENSMUST00000117702	protein_coding	principal1	8	1	123806068	1080
ENSMUSG00000036528	protein_coding	Ppfibp2	ENSMUST00000040056	protein_coding	principal3	7	1	107595266	3310
ENSMUSG00000109536	TEC	9330162G02Rik	ENSMUST00000208498	TEC		7	-1	59254788	30942
ENSMUSG00000109014	lincRNA	Gm44546	ENSMUST00000208353	lincRNA		7	1	131824013	368
ENSMUSG00000108937	processed_pseudogene	Gm18908	ENSMUST00000207125	processed_pseudogene		7	1	60132202	1483
ENSMUSG00000019478	protein_coding	Rab4a	ENSMUST00000212846	nonsense_mediated_decay		8	1	123827329	640
ENSMUSG00000019726	protein_coding	Lyst	ENSMUST00000220937	retained_intron		13	1	13590409	5854
ENSMUSG00000036528	protein_coding	Ppfibp2	ENSMUST00000208504	retained_intron		7	1	107595284	1725
ENSMUSG00000019726	protein_coding	Lyst	ENSMUST00000223527	retained_intron		13	1	13639911	591
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000196077	nonsense_mediated_decay		3	-1	95754835	1981
ENSMUSG00000019726	protein_coding	Lyst	ENSMUST00000231064	protein_coding		13	1	13684091	178
ENSMUSG00000036528	protein_coding	Ppfibp2	ENSMUST00000208956	protein_coding		7	1	107595285	1090
ENSMUSG00000086108	antisense	Gm5602	ENSMUST00000146366	antisense		7	-1	130866330	1763
ENSMUSG00000059645	protein_coding	Gm7361	ENSMUST00000074148	protein_coding	principal1	5	1	26257691	2995
ENSMUSG00000109555	TEC	Gm44891	ENSMUST00000208817	TEC		7	-1	132314078	2223
ENSMUSG00000109104	processed_pseudogene	Gm6108	ENSMUST00000208365	processed_pseudogene		7	1	130766953	367
ENSMUSG00000011350	processed_transcript	Gm5893	ENSMUST00000135286	lincRNA		7	1	24818795	1880
ENSMUSG00000044452	protein_coding	Zfp507	ENSMUST00000061586	protein_coding	principal1	7	-1	35802989	6693
ENSMUSG00000019726	protein_coding	Lyst	ENSMUST00000221717	retained_intron		13	1	13709351	2237
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000199464	nonsense_mediated_decay		3	-1	95754851	2037
ENSMUSG00000011350	processed_transcript	Gm5893	ENSMUST00000150149	retained_intron		7	1	24822109	444
ENSMUSG00000020545	protein_coding	Lrrc72	ENSMUST00000020853	protein_coding		12	-1	36218202	660
ENSMUSG00000109137	lincRNA	Gm34908	ENSMUST00000207222	lincRNA		7	-1	132365863	569
ENSMUSG00000019726	protein_coding	Lyst	ENSMUST00000221483	retained_intron		13	1	13746736	2097
ENSMUSG00000029655	protein_coding	N4bp2l2	ENSMUST00000118316	protein_coding	principal1	5	-1	150665612	8982
ENSMUSG00000011350	processed_transcript	Gm5893	ENSMUST00000155799	retained_intron		7	1	24828288	682
ENSMUSG00000019726	protein_coding	Lyst	ENSMUST00000221587	retained_intron		13	1	13760769	306
ENSMUSG00000085663	antisense	Gm15718	ENSMUST00000131085	antisense		7	-1	132983552	311
ENSMUSG00000036528	protein_coding	Ppfibp2	ENSMUST00000098134	protein_coding	alternative2	7	1	107606844	3827
ENSMUSG00000082988	processed_pseudogene	Gm5903	ENSMUST00000121836	processed_pseudogene		7	-1	130354362	2325
ENSMUSG00000020545	protein_coding	Lrrc72	ENSMUST00000221155	protein_coding	principal1	12	-1	36253395	1141
ENSMUSG00000029655	protein_coding	N4bp2l2	ENSMUST00000201384	retained_intron		5	-1	150648261	7526
ENSMUSG00000036528	protein_coding	Ppfibp2	ENSMUST00000239294	protein_coding		7	1	107665311	808
ENSMUSG00000087348	antisense	Gm15582	ENSMUST00000132849	antisense		7	-1	132659884	1581
ENSMUSG00000044452	protein_coding	Zfp507	ENSMUST00000206615	protein_coding		7	-1	35794044	3598
ENSMUSG00000011350	processed_transcript	Gm5893	ENSMUST00000164057	processed_transcript		7	1	24818795	1951
ENSMUSG00000036528	protein_coding	Ppfibp2	ENSMUST00000208159	protein_coding		7	1	107742906	706
ENSMUSG00000108782	lincRNA	Gm32772	ENSMUST00000207022	lincRNA		7	-1	17371627	675
ENSMUSG00000029655	protein_coding	N4bp2l2	ENSMUST00000156180	protein_coding		5	-1	150661487	650
ENSMUSG00000108782	lincRNA	Gm32772	ENSMUST00000206616	lincRNA		7	-1	17363772	439
ENSMUSG00000044452	protein_coding	Zfp507	ENSMUST00000187282	protein_coding		7	-1	35802967	944
ENSMUSG00000024211	protein_coding	Grm8	ENSMUST00000115323	protein_coding	principal3	6	-1	28134545	3856
ENSMUSG00000029655	protein_coding	N4bp2l2	ENSMUST00000145822	retained_intron		5	-1	150647793	714
ENSMUSG00000108782	lincRNA	Gm32772	ENSMUST00000205898	lincRNA		7	-1	17363772	594
ENSMUSG00000044452	protein_coding	Zfp507	ENSMUST00000206761	processed_transcript		7	-1	35779168	169
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000137638	retained_intron		1	1	87756076	1594
ENSMUSG00000024211	protein_coding	Grm8	ENSMUST00000090512	protein_coding	alternative1	6	-1	28126195	2830
ENSMUSG00000078570	protein_coding	1110065P20Rik	ENSMUST00000106190	protein_coding	principal1	4	-1	124850809	968
ENSMUSG00000044452	protein_coding	Zfp507	ENSMUST00000205670	protein_coding		7	-1	35802986	608
ENSMUSG00000024211	protein_coding	Grm8	ENSMUST00000131897	protein_coding		6	-1	28133325	1238
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000113186	protein_coding	alternative1	1	1	87756076	3004
ENSMUSG00000078570	protein_coding	1110065P20Rik	ENSMUST00000125776	protein_coding		4	-1	124850661	761
ENSMUSG00000029655	protein_coding	N4bp2l2	ENSMUST00000144378	retained_intron		5	-1	150665577	3842
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000128112	protein_coding		5	1	76657683	583
ENSMUSG00000044452	protein_coding	Zfp507	ENSMUST00000144656	retained_intron		7	-1	35802954	640
ENSMUSG00000003555	protein_coding	Cyp17a1	ENSMUST00000026012	protein_coding	principal1	19	-1	46672974	1815
ENSMUSG00000044452	protein_coding	Zfp507	ENSMUST00000206003	retained_intron		7	-1	35803003	987
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000187287	processed_transcript		5	1	76657685	1424
ENSMUSG00000029655	protein_coding	N4bp2l2	ENSMUST00000141857	protein_coding		5	-1	150665346	293
ENSMUSG00000054715	protein_coding	Zscan22	ENSMUST00000055528	protein_coding	principal1	7	1	12897815	2620
ENSMUSG00000006205	protein_coding	Htra1	ENSMUST00000150717	retained_intron		7	1	130936111	1572
ENSMUSG00000029655	protein_coding	N4bp2l2	ENSMUST00000201390	retained_intron		5	-1	150666183	1009
ENSMUSG00000003555	protein_coding	Cyp17a1	ENSMUST00000236174	protein_coding		19	-1	46673172	2403
ENSMUSG00000024211	protein_coding	Grm8	ENSMUST00000146727	processed_transcript		6	-1	28135178	4799
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000113190	protein_coding	alternative1	1	1	87756086	3102
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000125922	processed_transcript		5	1	76657721	936
ENSMUSG00000054715	protein_coding	Zscan22	ENSMUST00000117189	protein_coding		7	1	12897836	2995
ENSMUSG00000024211	protein_coding	Grm8	ENSMUST00000132755	protein_coding		6	-1	28133129	532
ENSMUSG00000020545	protein_coding	Lrrc72	ENSMUST00000221665	processed_transcript		12	-1	36253398	934
ENSMUSG00000003555	protein_coding	Cyp17a1	ENSMUST00000131142	retained_intron		19	-1	46669513	569
ENSMUSG00000024211	protein_coding	Grm8	ENSMUST00000202861	processed_transcript		6	-1	28134385	2358
ENSMUSG00000026027	protein_coding	Stradb	ENSMUST00000027185	protein_coding	principal1	1	1	58973522	2960
ENSMUSG00000054715	protein_coding	Zscan22	ENSMUST00000120809	protein_coding	principal1	7	1	12897841	1826
ENSMUSG00000003555	protein_coding	Cyp17a1	ENSMUST00000156577	retained_intron		19	-1	46671291	377
ENSMUSG00000024211	protein_coding	Grm8	ENSMUST00000115324	protein_coding	principal3	6	-1	28126125	3299
ENSMUSG00000078570	protein_coding	1110065P20Rik	ENSMUST00000185036	protein_coding		4	-1	124851196	1223
ENSMUSG00000020545	protein_coding	Lrrc72	ENSMUST00000222145	retained_intron		12	-1	36218218	934
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000134310	protein_coding		2	1	135659711	2744
ENSMUSG00000025962	protein_coding	Fastkd2	ENSMUST00000027103	protein_coding	principal1	1	1	63730614	4486
ENSMUSG00000054715	protein_coding	Zscan22	ENSMUST00000119989	protein_coding		7	1	12897867	2087
ENSMUSG00000048745	protein_coding	Olfr820	ENSMUST00000214917	protein_coding	principal1	10	1	130012621	4701
ENSMUSG00000026027	protein_coding	Stradb	ENSMUST00000152318	protein_coding		1	1	58991058	505
ENSMUSG00000078570	protein_coding	1110065P20Rik	ENSMUST00000137769	protein_coding		4	-1	124850473	659
ENSMUSG00000046845	protein_coding	Il1f10	ENSMUST00000058056	protein_coding	principal1	2	1	24291196	538
ENSMUSG00000031809	protein_coding	1700018B08Rik	ENSMUST00000034265	protein_coding	principal1	8	-1	121541954	1084
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000151037	retained_intron		1	1	87756088	3344
ENSMUSG00000031362	protein_coding	Xlr4c	ENSMUST00000068551	protein_coding	principal1	X	-1	73243068	1500
ENSMUSG00000048745	protein_coding	Olfr820	ENSMUST00000215791	protein_coding	principal1	10	1	130012668	3956
ENSMUSG00000107377	TEC	Gm42801	ENSMUST00000202562	TEC		6	-1	27443953	2865
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000134603	retained_intron		1	1	87756093	1674
ENSMUSG00000020946	protein_coding	Gosr2	ENSMUST00000021329	protein_coding	principal1	11	-1	103697898	3266
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000129431	retained_intron		1	1	87766901	640
ENSMUSG00000078570	protein_coding	1110065P20Rik	ENSMUST00000163946	protein_coding		4	-1	124850730	762
ENSMUSG00000048745	protein_coding	Olfr820	ENSMUST00000059244	protein_coding	principal1	10	1	130017301	1061
ENSMUSG00000101374	transcribed_processed_pseudogene	Gm28844	ENSMUST00000189297	processed_transcript		Y	-1	71329800	815
ENSMUSG00000101529	lincRNA	Gm29636	ENSMUST00000188149	lincRNA		Y	1	67716432	2169
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000137969	retained_intron		2	1	135741830	739
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000139628	retained_intron		1	1	87775565	332
ENSMUSG00000099335	processed_pseudogene	Gm29635	ENSMUST00000187221	processed_pseudogene		Y	1	67721188	315
ENSMUSG00000110398	processed_pseudogene	Gm45616	ENSMUST00000211711	processed_pseudogene		7	-1	11773986	319
ENSMUSG00000020946	protein_coding	Gosr2	ENSMUST00000107013	protein_coding		11	-1	103697694	1044
ENSMUSG00000026289	protein_coding	Atg16l1	ENSMUST00000127884	retained_intron		1	1	87778458	3400
ENSMUSG00000100897	unprocessed_pseudogene	Gm29634	ENSMUST00000188467	unprocessed_pseudogene		Y	1	67757697	696
ENSMUSG00000110182	processed_pseudogene	Gm45617	ENSMUST00000211132	processed_pseudogene		7	1	11774006	209
ENSMUSG00000025962	protein_coding	Fastkd2	ENSMUST00000148758	retained_intron		1	1	63730641	2117
ENSMUSG00000101139	unprocessed_pseudogene	Gm29639	ENSMUST00000188375	unprocessed_pseudogene		Y	-1	67829491	580
ENSMUSG00000069306	protein_coding	Hist1h4m	ENSMUST00000104941	protein_coding	principal1	13	1	21811746	402
ENSMUSG00000020946	protein_coding	Gosr2	ENSMUST00000145265	processed_transcript		11	-1	103697698	917
ENSMUSG00000031809	protein_coding	1700018B08Rik	ENSMUST00000182739	nonsense_mediated_decay		8	-1	121541869	955
ENSMUSG00000031362	protein_coding	Xlr4c	ENSMUST00000114531	protein_coding	principal1	X	-1	73243027	1104
ENSMUSG00000031809	protein_coding	1700018B08Rik	ENSMUST00000183280	nonsense_mediated_decay		8	-1	121541869	959
ENSMUSG00000085999	lincRNA	Gm13411	ENSMUST00000149429	lincRNA		2	1	24322424	414
ENSMUSG00000101374	transcribed_processed_pseudogene	Gm28844	ENSMUST00000189411	processed_transcript		Y	-1	71329712	302
ENSMUSG00000101374	transcribed_processed_pseudogene	Gm28844	ENSMUST00000186680	processed_transcript		Y	-1	71329714	120
ENSMUSG00000105786	processed_pseudogene	Gm18957	ENSMUST00000197623	processed_pseudogene		5	1	26355418	1813
ENSMUSG00000025962	protein_coding	Fastkd2	ENSMUST00000128621	retained_intron		1	1	63730643	2613
ENSMUSG00000101374	transcribed_processed_pseudogene	Gm28844	ENSMUST00000188806	processed_transcript		Y	-1	71329716	543
ENSMUSG00000025962	protein_coding	Fastkd2	ENSMUST00000131478	processed_transcript		1	1	63737714	642
ENSMUSG00000031809	protein_coding	1700018B08Rik	ENSMUST00000182460	protein_coding		8	-1	121544320	680
ENSMUSG00000057551	protein_coding	Zfp317	ENSMUST00000213725	protein_coding		9	1	19622102	2354
ENSMUSG00000025962	protein_coding	Fastkd2	ENSMUST00000123945	retained_intron		1	1	63748021	741
ENSMUSG00000034990	protein_coding	Otoa	ENSMUST00000207598	retained_intron		7	1	121081650	4347
ENSMUSG00000103904	TEC	Gm37497	ENSMUST00000195830	TEC		8	-1	121947847	798
ENSMUSG00000101374	transcribed_processed_pseudogene	Gm28844	ENSMUST00000189667	processed_transcript		Y	-1	71329718	655
ENSMUSG00000025962	protein_coding	Fastkd2	ENSMUST00000134454	processed_transcript		1	1	63751221	327
ENSMUSG00000057551	protein_coding	Zfp317	ENSMUST00000208694	protein_coding	principal1	9	1	19622128	3988
ENSMUSG00000097637	antisense	4933417D19Rik	ENSMUST00000181432	antisense		8	1	123235091	1229
ENSMUSG00000003660	protein_coding	Snrnp200	ENSMUST00000103220	protein_coding	principal1	2	1	127208399	6745
ENSMUSG00000108441	lincRNA	Gm32846	ENSMUST00000205665	lincRNA		7	-1	17424099	842
ENSMUSG00000057551	protein_coding	Zfp317	ENSMUST00000215372	protein_coding	principal1	9	1	19622304	2809
ENSMUSG00000101374	transcribed_processed_pseudogene	Gm28844	ENSMUST00000188713	processed_transcript		Y	-1	71327782	327
ENSMUSG00000101374	transcribed_processed_pseudogene	Gm28844	ENSMUST00000189142	processed_transcript		Y	-1	71329743	255
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000207750	protein_coding	alternative2	7	1	75455534	12597
ENSMUSG00000003660	protein_coding	Snrnp200	ENSMUST00000140868	processed_transcript		2	1	127221695	593
ENSMUSG00000006205	protein_coding	Htra1	ENSMUST00000006367	protein_coding	principal1	7	1	130936203	2041
ENSMUSG00000034990	protein_coding	Otoa	ENSMUST00000171880	protein_coding		7	1	121083249	556
ENSMUSG00000057551	protein_coding	Zfp317	ENSMUST00000214731	processed_transcript		9	1	19622799	563
ENSMUSG00000031362	protein_coding	Xlr4c	ENSMUST00000114530	protein_coding	principal1	X	-1	73243130	1220
ENSMUSG00000101374	transcribed_processed_pseudogene	Gm28844	ENSMUST00000190172	processed_transcript		Y	-1	71327782	229
ENSMUSG00000057551	protein_coding	Zfp317	ENSMUST00000079042	protein_coding	principal1	9	1	19641224	1824
ENSMUSG00000101374	transcribed_processed_pseudogene	Gm28844	ENSMUST00000187977	transcribed_processed_pseudogene		Y	-1	71328219	615
ENSMUSG00000069305	protein_coding	Hist1h4n	ENSMUST00000102979	protein_coding	principal1	13	-1	21832196	430
ENSMUSG00000003660	protein_coding	Snrnp200	ENSMUST00000143481	retained_intron		2	1	127236809	722
ENSMUSG00000030435	protein_coding	U2af2	ENSMUST00000005041	protein_coding	alternative1	7	1	5062143	2183
ENSMUSG00000003660	protein_coding	Snrnp200	ENSMUST00000131435	retained_intron		2	1	127238092	733
ENSMUSG00000118390	TEC	Gm50102	ENSMUST00000237599	TEC		17	-1	31487369	2368
ENSMUSG00000031362	protein_coding	Xlr4c	ENSMUST00000126155	processed_transcript		X	-1	73239009	535
ENSMUSG00000104331	TEC	Gm38284	ENSMUST00000194803	TEC		1	1	147515726	4539
ENSMUSG00000028889	protein_coding	Yrdc	ENSMUST00000102628	protein_coding	principal1	4	1	124850679	1634
ENSMUSG00000031362	protein_coding	Xlr4c	ENSMUST00000156749	processed_transcript		X	-1	73240098	677
ENSMUSG00000006205	protein_coding	Htra1	ENSMUST00000153290	processed_transcript		7	1	130943489	1606
ENSMUSG00000031362	protein_coding	Xlr4c	ENSMUST00000114528	protein_coding		X	-1	73243049	372
ENSMUSG00000028889	protein_coding	Yrdc	ENSMUST00000144851	protein_coding		4	1	124851351	724
ENSMUSG00000006205	protein_coding	Htra1	ENSMUST00000140741	retained_intron		7	1	130981670	309
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000208187	retained_intron		7	1	75455557	1381
ENSMUSG00000006205	protein_coding	Htra1	ENSMUST00000150905	processed_transcript		7	1	130982730	582
ENSMUSG00000028889	protein_coding	Yrdc	ENSMUST00000173434	retained_intron		4	1	124851895	512
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000207751	retained_intron		7	1	75455868	1295
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000184371	nonsense_mediated_decay		2	1	135741830	3754
ENSMUSG00000079566	protein_coding	Spin2d	ENSMUST00000114517	protein_coding	principal1	X	-1	73176989	1015
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000207923	protein_coding		7	1	75610039	2612
ENSMUSG00000030435	protein_coding	U2af2	ENSMUST00000209099	protein_coding	principal3	7	1	5062245	2088
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000208708	protein_coding		7	1	75611103	1705
ENSMUSG00000048065	protein_coding	Cyb5r2	ENSMUST00000052438	protein_coding	principal3	7	-1	107758032	2772
ENSMUSG00000039210	protein_coding	Gpatch2	ENSMUST00000160481	nonsense_mediated_decay		1	1	187215511	2880
ENSMUSG00000030435	protein_coding	U2af2	ENSMUST00000207097	nonsense_mediated_decay		7	1	5062275	626
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000238963	protein_coding	alternative2	5	1	76658330	7096
ENSMUSG00000048065	protein_coding	Cyb5r2	ENSMUST00000208217	protein_coding	alternative2	7	-1	107757996	1178
ENSMUSG00000047022	protein_coding	Mipol1	ENSMUST00000145003	protein_coding	principal2	12	1	57230446	1424
ENSMUSG00000031849	protein_coding	Comp	ENSMUST00000003659	protein_coding	principal1	8	1	70373558	2416
ENSMUSG00000049740	TEC	5330417H12Rik	ENSMUST00000060348	TEC		7	-1	107625161	1191
ENSMUSG00000030435	protein_coding	U2af2	ENSMUST00000207960	retained_intron		7	1	5062283	904
ENSMUSG00000039210	protein_coding	Gpatch2	ENSMUST00000110943	protein_coding	alternative2	1	1	187215522	4702
ENSMUSG00000030435	protein_coding	U2af2	ENSMUST00000208419	retained_intron		7	1	5062292	684
ENSMUSG00000030435	protein_coding	U2af2	ENSMUST00000207523	retained_intron		7	1	5062304	486
ENSMUSG00000039210	protein_coding	Gpatch2	ENSMUST00000161260	retained_intron		1	1	187215538	1957
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000115724	protein_coding		17	1	8526801	3611
ENSMUSG00000071745	protein_coding	DXBay18	ENSMUST00000080324	protein_coding	principal1	X	-1	73149450	2862
ENSMUSG00000046546	protein_coding	Fam43a	ENSMUST00000059078	protein_coding	principal1	16	1	30599723	3075
ENSMUSG00000009097	protein_coding	Tbx1	ENSMUST00000232335	protein_coding	principal2	16	-1	18586969	2511
ENSMUSG00000031849	protein_coding	Comp	ENSMUST00000213072	nonsense_mediated_decay		8	1	70373871	522
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000233016	processed_transcript		17	1	8527026	498
ENSMUSG00000039210	protein_coding	Gpatch2	ENSMUST00000044812	protein_coding		1	1	187215544	1639
ENSMUSG00000116570	lincRNA	Gm49754	ENSMUST00000231445	lincRNA		16	-1	30793255	269
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000233652	retained_intron		17	1	8757018	409
ENSMUSG00000031849	protein_coding	Comp	ENSMUST00000212439	processed_transcript		8	1	70375038	575
ENSMUSG00000009097	protein_coding	Tbx1	ENSMUST00000232557	retained_intron		16	-1	18583328	2349
ENSMUSG00000047022	protein_coding	Mipol1	ENSMUST00000123498	protein_coding	alternative2	12	1	57230446	2117
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000207079	retained_intron		7	1	75611833	1406
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000121160	protein_coding	alternative2	5	1	76752368	6921
ENSMUSG00000031849	protein_coding	Comp	ENSMUST00000212488	protein_coding		8	1	70380160	495
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000208182	retained_intron		7	1	75611840	1455
ENSMUSG00000039210	protein_coding	Gpatch2	ENSMUST00000159748	nonsense_mediated_decay		1	1	187215546	1374
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000141877	retained_intron		17	1	8801693	782
ENSMUSG00000047022	protein_coding	Mipol1	ENSMUST00000153439	retained_intron		12	1	57230491	3737
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000110109	protein_coding	principal1	2	1	135741830	5217
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000208456	processed_transcript		7	1	75612284	716
ENSMUSG00000009097	protein_coding	Tbx1	ENSMUST00000009241	protein_coding	alternative2	16	-1	18590671	1858
ENSMUSG00000117318	processed_pseudogene	Gm18679	ENSMUST00000233243	processed_pseudogene		17	-1	48240641	1766
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000127729	processed_transcript		2	1	135764911	441
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000120818	protein_coding		5	1	76809988	1378
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000208053	retained_intron		7	1	75614688	615
ENSMUSG00000047022	protein_coding	Mipol1	ENSMUST00000153137	protein_coding	alternative2	12	1	57282173	2158
ENSMUSG00000049796	protein_coding	Crh	ENSMUST00000061294	protein_coding	principal1	3	-1	19695396	1320
ENSMUSG00000047022	protein_coding	Mipol1	ENSMUST00000130447	protein_coding	alternative2	12	1	57282173	2171
ENSMUSG00000009097	protein_coding	Tbx1	ENSMUST00000232143	nonsense_mediated_decay		16	-1	18586969	1682
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000207998	protein_coding		7	1	75643319	1269
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000127044	processed_transcript		2	1	135887694	669
ENSMUSG00000030435	protein_coding	U2af2	ENSMUST00000207498	nonsense_mediated_decay		7	1	5067228	1455
ENSMUSG00000009097	protein_coding	Tbx1	ENSMUST00000232589	protein_coding		16	-1	18588808	595
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000089085	protein_coding	principal3	17	1	8801693	7769
ENSMUSG00000047022	protein_coding	Mipol1	ENSMUST00000136006	retained_intron		12	1	57306083	487
ENSMUSG00000024713	protein_coding	Pcsk5	ENSMUST00000025618	protein_coding	principal1	19	-1	17837632	7188
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000141025	processed_transcript		2	1	135942073	449
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000209040	processed_transcript		7	1	75644185	470
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000239346	protein_coding		7	1	75690946	461
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000120639	protein_coding	principal2	5	1	76840599	6826
ENSMUSG00000047022	protein_coding	Mipol1	ENSMUST00000128945	processed_transcript		12	1	57332429	283
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000208248	retained_intron		7	1	75695478	3133
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000207511	retained_intron		7	1	75700864	2061
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000132686	processed_transcript		2	1	135946471	779
ENSMUSG00000026956	protein_coding	Uap1l1	ENSMUST00000102925	protein_coding	principal1	2	-1	25365682	3349
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000207239	protein_coding		7	1	75701992	1908
ENSMUSG00000086372	antisense	Gm16246	ENSMUST00000145464	antisense		12	-1	57450120	1346
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000150072	processed_transcript		2	1	135983029	508
ENSMUSG00000024713	protein_coding	Pcsk5	ENSMUST00000050715	protein_coding		19	-1	17837632	5768
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000208151	protein_coding		2	-1	113217087	15370
ENSMUSG00000030967	protein_coding	Zranb1	ENSMUST00000106157	protein_coding	principal2	7	1	132931142	5008
ENSMUSG00000042265	protein_coding	Trem1	ENSMUST00000113251	protein_coding		17	1	48232768	2077
ENSMUSG00000118265	antisense	Gm50211	ENSMUST00000237404	antisense		18	1	80705190	409
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000208009	retained_intron		7	1	75701997	601
ENSMUSG00000039210	protein_coding	Gpatch2	ENSMUST00000160471	protein_coding		1	1	187215743	3841
ENSMUSG00000102252	protein_coding	Snrpn	ENSMUST00000059305	protein_coding	principal1	7	-1	60005111	1932
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000121851	protein_coding		5	1	76840619	1165
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000147744	protein_coding		2	1	135987876	2307
ENSMUSG00000030967	protein_coding	Zranb1	ENSMUST00000215716	protein_coding	alternative1	7	1	132948168	2205
ENSMUSG00000066406	protein_coding	Akap13	ENSMUST00000166315	protein_coding	principal2	7	1	75455534	12543
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000152373	retained_intron		5	1	76858842	796
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000147122	processed_transcript		2	1	136007230	389
ENSMUSG00000030435	protein_coding	U2af2	ENSMUST00000207926	retained_intron		7	1	5068030	2412
ENSMUSG00000079104	protein_coding	Prps1l3	ENSMUST00000139049	protein_coding	principal1	12	1	57230412	1720
ENSMUSG00000039210	protein_coding	Gpatch2	ENSMUST00000160570	protein_coding		1	1	187226180	3704
ENSMUSG00000039210	protein_coding	Gpatch2	ENSMUST00000065573	protein_coding	principal2	1	1	187215511	4547
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000151567	protein_coding		5	1	76866101	436
ENSMUSG00000102252	protein_coding	Snrpn	ENSMUST00000098402	protein_coding	principal1	7	-1	60140219	2076
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000149216	processed_transcript		5	1	76869188	319
ENSMUSG00000081864	transcribed_unprocessed_pseudogene	Olfr405-ps1	ENSMUST00000127098	processed_transcript		11	-1	74266236	711
ENSMUSG00000081755	processed_pseudogene	Mup-ps23	ENSMUST00000118063	processed_pseudogene		4	-1	61856554	630
ENSMUSG00000081864	transcribed_unprocessed_pseudogene	Olfr405-ps1	ENSMUST00000120649	transcribed_unprocessed_pseudogene		11	-1	74256631	936
ENSMUSG00000039943	protein_coding	Plcb4	ENSMUST00000035646	protein_coding	principal1	2	1	135805548	3635
ENSMUSG00000080974	processed_pseudogene	Gm9009	ENSMUST00000117321	processed_pseudogene		X	1	94615800	326
ENSMUSG00000030967	protein_coding	Zranb1	ENSMUST00000210507	nonsense_mediated_decay		7	1	132949584	1785
ENSMUSG00000026956	protein_coding	Uap1l1	ENSMUST00000151131	processed_transcript		2	-1	25363698	1353
ENSMUSG00000114642	processed_pseudogene	Gm5461	ENSMUST00000223938	processed_pseudogene		14	-1	61325810	959
ENSMUSG00000030967	protein_coding	Zranb1	ENSMUST00000153335	retained_intron		7	1	132980859	757
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000190666	antisense		7	-1	59324149	3708
ENSMUSG00000026956	protein_coding	Uap1l1	ENSMUST00000146226	processed_transcript		2	-1	25364657	385
ENSMUSG00000042506	protein_coding	Usp22	ENSMUST00000041683	protein_coding	principal1	11	-1	61175055	4434
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000189653	antisense		7	-1	59318457	3136
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000163347	protein_coding	principal2	5	1	76840599	6835
ENSMUSG00000070375	protein_coding	Olfr406	ENSMUST00000214303	protein_coding	principal1	11	1	74259893	2842
ENSMUSG00000002307	protein_coding	Daxx	ENSMUST00000173028	protein_coding		17	1	33909414	477
ENSMUSG00000030967	protein_coding	Zranb1	ENSMUST00000033265	protein_coding	principal2	7	1	132949584	2210
ENSMUSG00000086928	lincRNA	Gm14210	ENSMUST00000140949	lincRNA		2	-1	135812927	503
ENSMUSG00000030435	protein_coding	U2af2	ENSMUST00000165399	protein_coding		7	1	5067228	1810
ENSMUSG00000070375	protein_coding	Olfr406	ENSMUST00000217016	protein_coding	principal1	11	1	74259808	2651
ENSMUSG00000036377	protein_coding	C530008M17Rik	ENSMUST00000086909	protein_coding		5	1	76656512	1844
ENSMUSG00000108858	processed_pseudogene	Gm4587	ENSMUST00000209135	processed_pseudogene		7	1	132483658	637
ENSMUSG00000085908	sense_intronic	Gm14209	ENSMUST00000154946	sense_intronic		2	1	135669453	462
ENSMUSG00000042506	protein_coding	Usp22	ENSMUST00000173525	retained_intron		11	-1	61157392	930
ENSMUSG00000062758	processed_pseudogene	Gm16477	ENSMUST00000085365	processed_pseudogene		7	-1	131614988	801
ENSMUSG00000101474	lincRNA	Gm29656	ENSMUST00000187236	lincRNA		Y	1	34186435	174
ENSMUSG00000103529	TEC	A730089K16Rik	ENSMUST00000194526	TEC		5	-1	76658355	2427
ENSMUSG00000085709	lincRNA	Gm14211	ENSMUST00000152250	lincRNA		2	-1	135693154	408
ENSMUSG00000042265	protein_coding	Trem1	ENSMUST00000048782	protein_coding	principal1	17	1	48232771	2993
ENSMUSG00000070375	protein_coding	Olfr406	ENSMUST00000133561	protein_coding	principal1	11	1	74269344	1101
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000208290	protein_coding	principal2	2	-1	113217087	15468
ENSMUSG00000083874	processed_pseudogene	Gm7494	ENSMUST00000121248	processed_pseudogene		5	-1	76742513	441
ENSMUSG00000042506	protein_coding	Usp22	ENSMUST00000174035	retained_intron		11	-1	61159384	520
ENSMUSG00000026956	protein_coding	Uap1l1	ENSMUST00000131025	processed_transcript		2	-1	25364128	652
ENSMUSG00000102694	TEC	Gm37496	ENSMUST00000191930	TEC		12	-1	104024427	2509
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000080673	protein_coding	alternative2	2	-1	113217068	15422
ENSMUSG00000108849	lincRNA	Gm35147	ENSMUST00000208383	lincRNA		7	-1	132466661	1820
ENSMUSG00000109570	TEC	Gm44624	ENSMUST00000208700	TEC		7	1	131396258	2278
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000115717	nonsense_mediated_decay		17	1	8801779	7630
ENSMUSG00000026956	protein_coding	Uap1l1	ENSMUST00000138985	processed_transcript		2	-1	25362730	399
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000134358	protein_coding		2	-1	113216990	14958
ENSMUSG00000021928	protein_coding	Ebpl	ENSMUST00000022494	protein_coding	principal1	14	-1	61360439	10092
ENSMUSG00000099737	lincRNA	Gm29655	ENSMUST00000187728	lincRNA		Y	1	34209370	622
ENSMUSG00000099737	lincRNA	Gm29655	ENSMUST00000190528	lincRNA		Y	1	34209370	437
ENSMUSG00000026956	protein_coding	Uap1l1	ENSMUST00000152537	processed_transcript		2	-1	25365615	621
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000233052	protein_coding		17	1	8803028	748
ENSMUSG00000101417	unprocessed_pseudogene	Gm21647	ENSMUST00000189755	unprocessed_pseudogene		Y	1	34285082	664
ENSMUSG00000042506	protein_coding	Usp22	ENSMUST00000174301	nonsense_mediated_decay		11	-1	61168275	657
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000142537	retained_intron		2	-1	112640559	612
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000115720	protein_coding	alternative2	17	1	8849985	3328
ENSMUSG00000021928	protein_coding	Ebpl	ENSMUST00000223560	retained_intron		14	-1	61360320	2563
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000208574	retained_intron		2	-1	112656548	1325
ENSMUSG00000078934	protein_coding	Pate13	ENSMUST00000176049	protein_coding	alternative2	9	1	35908423	1987
ENSMUSG00000101654	lincRNA	Gm29653	ENSMUST00000187192	lincRNA		Y	1	34335629	166
ENSMUSG00000076431	protein_coding	Sox4	ENSMUST00000067230	protein_coding	principal1	13	-1	28953713	4795
ENSMUSG00000042506	protein_coding	Usp22	ENSMUST00000174220	retained_intron		11	-1	61175029	889
ENSMUSG00000021928	protein_coding	Ebpl	ENSMUST00000225112	retained_intron		14	-1	61360408	3780
ENSMUSG00000024713	protein_coding	Pcsk5	ENSMUST00000235828	retained_intron		19	-1	17837632	4062
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000024647	protein_coding	alternative2	17	1	8880426	3089
ENSMUSG00000024713	protein_coding	Pcsk5	ENSMUST00000237115	processed_transcript		19	-1	17837632	2960
ENSMUSG00000101808	lincRNA	Gm29654	ENSMUST00000186886	lincRNA		Y	1	34410916	2169
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000136160	protein_coding		17	1	8893291	459
ENSMUSG00000078934	protein_coding	Pate13	ENSMUST00000176153	protein_coding	principal5	9	1	35908442	414
ENSMUSG00000083655	processed_pseudogene	Gm12099	ENSMUST00000118660	processed_pseudogene		11	-1	30705901	750
ENSMUSG00000024713	protein_coding	Pcsk5	ENSMUST00000235505	retained_intron		19	-1	17837617	3334
ENSMUSG00000020380	protein_coding	Rad50	ENSMUST00000020649	protein_coding	principal1	11	-1	53707319	5153
ENSMUSG00000108302	processed_pseudogene	Gm18207	ENSMUST00000205486	processed_pseudogene		7	1	24860946	526
ENSMUSG00000099910	unprocessed_pseudogene	Gm29651	ENSMUST00000189088	unprocessed_pseudogene		Y	1	34420129	697
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000149440	protein_coding		17	1	8924143	4897
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000189408	antisense		7	-1	59411173	1548
ENSMUSG00000103237	processed_pseudogene	Gm18547	ENSMUST00000192439	processed_pseudogene		2	1	10893709	811
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000146187	retained_intron		2	-1	112908497	2239
ENSMUSG00000100387	lincRNA	Gm28514	ENSMUST00000187488	lincRNA		7	1	35838260	450
ENSMUSG00000113936	processed_pseudogene	Gm8784	ENSMUST00000222096	processed_pseudogene		13	1	9223537	1435
ENSMUSG00000023868	protein_coding	Pde10a	ENSMUST00000115708	processed_transcript		17	1	8945569	2471
ENSMUSG00000118120	lincRNA	Gm33732	ENSMUST00000236611	lincRNA		18	-1	54823789	1147
ENSMUSG00000099201	lincRNA	Gm27187	ENSMUST00000184065	lincRNA		9	-1	35969520	588
ENSMUSG00000002699	protein_coding	Lcp2	ENSMUST00000052413	protein_coding	principal2	11	1	34046920	3644
ENSMUSG00000099201	lincRNA	Gm27187	ENSMUST00000184873	lincRNA		9	-1	36011558	606
ENSMUSG00000023781	protein_coding	Hes7	ENSMUST00000024543	protein_coding	principal1	11	1	69120404	1809
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000188262	antisense		7	-1	59453239	687
ENSMUSG00000041567	protein_coding	Serpina12	ENSMUST00000043915	protein_coding	principal1	12	-1	104044443	3690
ENSMUSG00000099818	unprocessed_pseudogene	Gm29652	ENSMUST00000188622	unprocessed_pseudogene		Y	1	34457229	615
ENSMUSG00000084390	processed_pseudogene	Gm15425	ENSMUST00000119013	processed_pseudogene		17	-1	8568860	2711
ENSMUSG00000020380	protein_coding	Rad50	ENSMUST00000128483	nonsense_mediated_decay		11	-1	53707319	3085
ENSMUSG00000013668	protein_coding	4933402N03Rik	ENSMUST00000070980	protein_coding	principal1	7	-1	131146314	1826
ENSMUSG00000002699	protein_coding	Lcp2	ENSMUST00000109329	protein_coding	alternative2	11	1	34047168	2209
ENSMUSG00000020380	protein_coding	Rad50	ENSMUST00000126121	processed_transcript		11	-1	53680212	404
ENSMUSG00000097386	antisense	9130213A22Rik	ENSMUST00000180487	antisense		11	-1	69122589	1581
ENSMUSG00000002699	protein_coding	Lcp2	ENSMUST00000133120	processed_transcript		11	1	34078177	198
ENSMUSG00000099104	protein_coding	Gm17087	ENSMUST00000184255	translated_processed_pseudogene		17	-1	8566950	1099
ENSMUSG00000060989	processed_pseudogene	Gm11847	ENSMUST00000125165	processed_pseudogene		4	1	12232833	1119
ENSMUSG00000020380	protein_coding	Rad50	ENSMUST00000124352	protein_coding		11	-1	53707295	2211
ENSMUSG00000099104	protein_coding	Gm17087	ENSMUST00000184183	protein_coding	principal1	17	-1	8566869	471
ENSMUSG00000081498	unprocessed_pseudogene	Olfr407-ps1	ENSMUST00000117794	unprocessed_pseudogene		11	-1	74281732	866
ENSMUSG00000113455	lincRNA	Gm48825	ENSMUST00000221031	lincRNA		13	1	9268684	968
ENSMUSG00000038658	protein_coding	Ric1	ENSMUST00000043610	protein_coding	principal1	19	1	29522282	7190
ENSMUSG00000113755	processed_pseudogene	Gm46391	ENSMUST00000220704	processed_pseudogene		13	-1	9273121	203
ENSMUSG00000002699	protein_coding	Lcp2	ENSMUST00000146318	processed_transcript		11	1	34087004	722
ENSMUSG00000002365	protein_coding	Snx9	ENSMUST00000002436	protein_coding	principal1	17	1	5841329	3331
ENSMUSG00000092075	unprocessed_pseudogene	Serpina4-ps1	ENSMUST00000166601	unprocessed_pseudogene		12	1	104080649	1287
ENSMUSG00000020380	protein_coding	Rad50	ENSMUST00000152598	processed_transcript		11	-1	53695000	693
ENSMUSG00000008384	protein_coding	Sertad1	ENSMUST00000008528	protein_coding	principal1	7	1	27486910	1233
ENSMUSG00000040339	protein_coding	Fam102b	ENSMUST00000046924	protein_coding		3	-1	109027273	5368
ENSMUSG00000100500	lincRNA	Gm29080	ENSMUST00000188565	lincRNA		Y	-1	34470529	356
ENSMUSG00000074240	protein_coding	Cib3	ENSMUST00000211946	retained_intron		8	-1	72212837	2014
ENSMUSG00000039934	protein_coding	Gsap	ENSMUST00000197522	retained_intron		5	1	21186255	3508
ENSMUSG00000085240	antisense	Gm12119	ENSMUST00000136083	antisense		11	1	33695894	700
ENSMUSG00000040339	protein_coding	Fam102b	ENSMUST00000171143	protein_coding	principal1	3	-1	109027607	5702
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000185693	antisense		7	-1	59874749	734
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000156757	retained_intron		2	-1	113217062	1730
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000193102	TEC		7	-1	59645543	294
ENSMUSG00000081367	processed_pseudogene	Gm13265	ENSMUST00000118090	processed_pseudogene		2	-1	10899091	421
ENSMUSG00000008384	protein_coding	Sertad1	ENSMUST00000135881	protein_coding		7	1	27487375	366
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000207603	retained_intron		2	-1	113217046	1294
ENSMUSG00000087328	antisense	Gm12120	ENSMUST00000125068	antisense		11	1	33705550	592
ENSMUSG00000024423	protein_coding	Impact	ENSMUST00000234763	protein_coding		18	1	12955852	475
ENSMUSG00000002365	protein_coding	Snx9	ENSMUST00000231803	processed_transcript		17	1	5841352	624
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000128192	retained_intron		2	-1	113217096	430
ENSMUSG00000117825	processed_pseudogene	Gm50365	ENSMUST00000237299	processed_pseudogene		18	1	54838045	466
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000208135	protein_coding		2	-1	113216968	137
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000191191	antisense		7	-1	59678601	3991
ENSMUSG00000100677	unprocessed_pseudogene	Gm21184	ENSMUST00000189684	unprocessed_pseudogene		Y	1	34486834	693
ENSMUSG00000024423	protein_coding	Impact	ENSMUST00000235079	processed_transcript		18	1	12955859	642
ENSMUSG00000106108	antisense	Gm43221	ENSMUST00000197612	antisense		3	1	109000024	2071
ENSMUSG00000033623	protein_coding	Pcgf3	ENSMUST00000112597	protein_coding		5	1	108461232	2169
ENSMUSG00000031818	protein_coding	Cox4i1	ENSMUST00000034276	protein_coding	principal1	8	1	120668222	745
ENSMUSG00000105638	lincRNA	4930408K08Rik	ENSMUST00000195936	lincRNA		3	-1	109080414	1436
ENSMUSG00000057378	protein_coding	Ryr3	ENSMUST00000091818	protein_coding		2	-1	113030331	15410
ENSMUSG00000085909	lincRNA	Gm11846	ENSMUST00000155156	lincRNA		4	1	12271399	515
ENSMUSG00000111731	lincRNA	Gm48727	ENSMUST00000215873	lincRNA		10	1	8903981	807
ENSMUSG00000047710	protein_coding	Champ1	ENSMUST00000051870	protein_coding	principal1	8	1	13869641	4013
ENSMUSG00000038658	protein_coding	Ric1	ENSMUST00000162184	retained_intron		19	1	29522335	2157
ENSMUSG00000031818	protein_coding	Cox4i1	ENSMUST00000181586	protein_coding	principal1	8	1	120668222	765
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000115181	protein_coding	principal1	17	-1	25115967	3530
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000185815	antisense		7	-1	59696230	670
ENSMUSG00000100171	unprocessed_pseudogene	Gm21201	ENSMUST00000190814	unprocessed_pseudogene		Y	1	34561734	693
ENSMUSG00000047710	protein_coding	Champ1	ENSMUST00000128557	protein_coding	principal1	8	1	13869704	3977
ENSMUSG00000111674	lincRNA	Gm48728	ENSMUST00000213841	lincRNA		10	1	8951949	330
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000185272	antisense		7	-1	59696211	726
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000024987	protein_coding	principal1	17	-1	25115905	3434
ENSMUSG00000070374	protein_coding	Olfr59	ENSMUST00000214048	protein_coding	principal1	11	1	74283736	3363
ENSMUSG00000038658	protein_coding	Ric1	ENSMUST00000160221	retained_intron		19	1	29522382	3114
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000186345	antisense		7	-1	59706383	456
ENSMUSG00000003344	protein_coding	Btbd2	ENSMUST00000126980	protein_coding	alternative2	10	-1	80656494	2449
ENSMUSG00000031818	protein_coding	Cox4i1	ENSMUST00000180856	retained_intron		8	1	120668261	608
ENSMUSG00000038658	protein_coding	Ric1	ENSMUST00000162492	protein_coding		19	1	29533236	3994
ENSMUSG00000104211	TEC	Gm37985	ENSMUST00000194728	TEC		4	1	12597388	74456
ENSMUSG00000021710	protein_coding	Nln	ENSMUST00000109315	protein_coding	principal1	13	-1	104109614	4162
ENSMUSG00000024376	protein_coding	Epb41l4a	ENSMUST00000025234	protein_coding	principal1	18	-1	34006919	3566
ENSMUSG00000074240	protein_coding	Cib3	ENSMUST00000098630	protein_coding		8	-1	72212819	585
ENSMUSG00000020155	protein_coding	Kcnmb1	ENSMUST00000020362	protein_coding	principal1	11	1	33963013	4191
ENSMUSG00000070374	protein_coding	Olfr59	ENSMUST00000143976	protein_coding	principal1	11	1	74283736	3088
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000152460	processed_transcript		17	-1	25103643	841
ENSMUSG00000082871	processed_pseudogene	Gm13263	ENSMUST00000121271	processed_pseudogene		2	-1	10959964	838
ENSMUSG00000091955	protein_coding	Gm9844	ENSMUST00000170837	protein_coding	principal1	7	1	24862213	485
ENSMUSG00000031818	protein_coding	Cox4i1	ENSMUST00000181795	protein_coding		8	1	120668308	476
ENSMUSG00000041754	protein_coding	Trem3	ENSMUST00000048065	protein_coding	principal1	17	1	48247777	994
ENSMUSG00000074240	protein_coding	Cib3	ENSMUST00000238973	protein_coding	principal1	8	-1	72212996	617
ENSMUSG00000111077	TEC	Gm48743	ENSMUST00000216441	TEC		10	-1	9071475	2057
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000155632	processed_transcript		17	-1	25106819	498
ENSMUSG00000070374	protein_coding	Olfr59	ENSMUST00000205790	protein_coding		11	1	74283794	891
ENSMUSG00000024376	protein_coding	Epb41l4a	ENSMUST00000236716	retained_intron		18	-1	33799202	2286
ENSMUSG00000038658	protein_coding	Ric1	ENSMUST00000160452	nonsense_mediated_decay		19	1	29595528	2643
ENSMUSG00000021710	protein_coding	Nln	ENSMUST00000225324	protein_coding		13	-1	104061854	453
ENSMUSG00000102734	TEC	Gm37343	ENSMUST00000192542	TEC		2	-1	11013918	111
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000188162	antisense		7	-1	59904686	770
ENSMUSG00000024376	protein_coding	Epb41l4a	ENSMUST00000235393	retained_intron		18	-1	33803098	928
ENSMUSG00000070374	protein_coding	Olfr59	ENSMUST00000206659	protein_coding		11	1	74283833	850
ENSMUSG00000003344	protein_coding	Btbd2	ENSMUST00000147162	retained_intron		10	-1	80644632	1876
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000143390	processed_transcript		17	-1	25101426	425
ENSMUSG00000038658	protein_coding	Ric1	ENSMUST00000161536	retained_intron		19	1	29597260	849
ENSMUSG00000021710	protein_coding	Nln	ENSMUST00000224058	processed_transcript		13	-1	104036567	1924
ENSMUSG00000087474	processed_transcript	Gm12100	ENSMUST00000150255	processed_transcript		11	1	30750832	1933
ENSMUSG00000085684	protein_coding	4930469K13Rik	ENSMUST00000141450	processed_transcript		11	-1	34098554	698
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000187666	antisense		7	-1	59862868	2517
ENSMUSG00000031818	protein_coding	Cox4i1	ENSMUST00000181847	nonsense_mediated_decay		8	1	120668336	611
ENSMUSG00000003344	protein_coding	Btbd2	ENSMUST00000151794	retained_intron		10	-1	80647710	722
ENSMUSG00000085684	protein_coding	4930469K13Rik	ENSMUST00000223852	protein_coding	principal5	11	-1	34098545	537
ENSMUSG00000038658	protein_coding	Ric1	ENSMUST00000161330	nonsense_mediated_decay		19	1	29597845	2667
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000156698	retained_intron		17	-1	25108150	4644
ENSMUSG00000021710	protein_coding	Nln	ENSMUST00000225704	processed_transcript		13	-1	104034573	564
ENSMUSG00000083990	processed_pseudogene	Gm12101	ENSMUST00000121590	processed_pseudogene		11	-1	30754961	390
ENSMUSG00000085684	protein_coding	4930469K13Rik	ENSMUST00000224226	protein_coding	alternative2	11	-1	34096845	243
ENSMUSG00000031818	protein_coding	Cox4i1	ENSMUST00000181172	retained_intron		8	1	120672590	578
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000146522	processed_transcript		17	-1	25115192	346
ENSMUSG00000021710	protein_coding	Nln	ENSMUST00000224945	protein_coding		13	-1	104109586	2486
ENSMUSG00000024376	protein_coding	Epb41l4a	ENSMUST00000236514	processed_transcript		18	-1	33832794	529
ENSMUSG00000099463	lincRNA	Gm29081	ENSMUST00000190140	lincRNA		Y	-1	34673374	1500
ENSMUSG00000003344	protein_coding	Btbd2	ENSMUST00000131876	protein_coding		10	-1	80656138	766
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000151205	retained_intron		17	-1	25113641	720
ENSMUSG00000003344	protein_coding	Btbd2	ENSMUST00000003434	protein_coding	principal2	10	-1	80657071	3026
ENSMUSG00000021710	protein_coding	Nln	ENSMUST00000224475	retained_intron		13	-1	104037642	560
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000139196	processed_transcript		17	-1	25115312	439
ENSMUSG00000031818	protein_coding	Cox4i1	ENSMUST00000181026	retained_intron		8	1	120673152	438
ENSMUSG00000021710	protein_coding	Nln	ENSMUST00000225478	retained_intron		13	-1	104070243	2720
ENSMUSG00000021710	protein_coding	Nln	ENSMUST00000224086	retained_intron		13	-1	104109595	1213
ENSMUSG00000024170	protein_coding	Telo2	ENSMUST00000130525	retained_intron		17	-1	25115954	1697
ENSMUSG00000033623	protein_coding	Pcgf3	ENSMUST00000046975	protein_coding	principal1	5	1	108461232	7708
ENSMUSG00000099463	lincRNA	Gm29081	ENSMUST00000186518	lincRNA		Y	-1	34672920	622
ENSMUSG00000099463	lincRNA	Gm29081	ENSMUST00000188696	lincRNA		Y	-1	34672920	438
ENSMUSG00000098371	processed_transcript	Gm28037	ENSMUST00000122365	processed_transcript		16	1	55966343	611
ENSMUSG00000024376	protein_coding	Epb41l4a	ENSMUST00000235876	retained_intron		18	-1	33891974	540
ENSMUSG00000024376	protein_coding	Epb41l4a	ENSMUST00000235242	retained_intron		18	-1	33891639	487
ENSMUSG00000003039	protein_coding	Fam32a	ENSMUST00000003123	protein_coding	principal1	8	1	72219730	2564
ENSMUSG00000039989	protein_coding	Cbx4	ENSMUST00000026665	protein_coding	principal1	11	-1	119086221	5179
ENSMUSG00000085257	lincRNA	Gm13264	ENSMUST00000138416	lincRNA		2	1	11036873	2011
ENSMUSG00000024376	protein_coding	Epb41l4a	ENSMUST00000237971	retained_intron		18	-1	34006966	3777
ENSMUSG00000108792	processed_pseudogene	Gm5418	ENSMUST00000206932	processed_pseudogene		7	1	17618499	528
ENSMUSG00000100745	lincRNA	Gm29077	ENSMUST00000185784	lincRNA		Y	1	34705341	2169
ENSMUSG00000033623	protein_coding	Pcgf3	ENSMUST00000138264	nonsense_mediated_decay		5	1	108461313	688
ENSMUSG00000003039	protein_coding	Fam32a	ENSMUST00000212117	retained_intron		8	1	72219764	3387
ENSMUSG00000033623	protein_coding	Pcgf3	ENSMUST00000143973	retained_intron		5	1	108473887	325
ENSMUSG00000081693	processed_pseudogene	Gm13297	ENSMUST00000120205	processed_pseudogene		2	1	11090830	934
ENSMUSG00000041550	protein_coding	Serpina5	ENSMUST00000021495	protein_coding	principal1	12	1	104101113	2162
ENSMUSG00000039989	protein_coding	Cbx4	ENSMUST00000145058	processed_transcript		11	-1	119086221	1410
ENSMUSG00000062732	protein_coding	Lypd4	ENSMUST00000079306	protein_coding	principal1	7	-1	24869941	1345
ENSMUSG00000038034	protein_coding	Igsf8	ENSMUST00000155363	retained_intron		1	1	172261641	2650
ENSMUSG00000112543	TEC	Gm48744	ENSMUST00000218588	TEC		10	-1	9224751	781
ENSMUSG00000024423	protein_coding	Impact	ENSMUST00000025290	protein_coding	principal1	18	1	12971923	3763
ENSMUSG00000111619	processed_pseudogene	Gm48348	ENSMUST00000215334	processed_pseudogene		9	-1	36092359	2440
ENSMUSG00000033623	protein_coding	Pcgf3	ENSMUST00000151897	retained_intron		5	1	108486220	574
ENSMUSG00000101341	unprocessed_pseudogene	Gm29076	ENSMUST00000187689	unprocessed_pseudogene		Y	1	34714548	697
ENSMUSG00000062732	protein_coding	Lypd4	ENSMUST00000122995	protein_coding		7	-1	24869732	751
ENSMUSG00000099850	processed_pseudogene	Gm28906	ENSMUST00000191371	processed_pseudogene		1	-1	45836788	1779
ENSMUSG00000112019	lincRNA	Gm48748	ENSMUST00000220435	lincRNA		10	-1	9336618	871
ENSMUSG00000024423	protein_coding	Impact	ENSMUST00000234369	nonsense_mediated_decay		18	1	12972272	634
ENSMUSG00000064061	protein_coding	Dzip3	ENSMUST00000121869	protein_coding	alternative2	16	-1	48994165	5820
ENSMUSG00000024423	protein_coding	Impact	ENSMUST00000234409	protein_coding		18	1	12974298	509
ENSMUSG00000034990	protein_coding	Otoa	ENSMUST00000047025	protein_coding	principal1	7	1	121083322	3773
ENSMUSG00000084817	processed_pseudogene	Gm5526	ENSMUST00000153604	processed_pseudogene		1	-1	45857754	423
ENSMUSG00000083900	processed_pseudogene	Gm13294	ENSMUST00000121757	processed_pseudogene		2	-1	11100262	1330
ENSMUSG00000086363	lincRNA	A330102I10Rik	ENSMUST00000146336	lincRNA		13	1	29014399	517
ENSMUSG00000024423	protein_coding	Impact	ENSMUST00000234035	protein_coding		18	1	12974478	687
ENSMUSG00000064061	protein_coding	Dzip3	ENSMUST00000139350	retained_intron		16	-1	48938582	5835
ENSMUSG00000100193	unprocessed_pseudogene	Gm29079	ENSMUST00000188875	unprocessed_pseudogene		Y	1	34751370	615
ENSMUSG00000098549	protein_coding	Gm5269	ENSMUST00000184038	translated_processed_pseudogene		1	-1	45890273	749
ENSMUSG00000098549	protein_coding	Gm5269	ENSMUST00000183590	protein_coding	principal1	1	-1	45890078	138
ENSMUSG00000024423	protein_coding	Impact	ENSMUST00000235053	protein_coding		18	1	12974674	591
ENSMUSG00000035569	protein_coding	Ankrd11	ENSMUST00000172906	nonsense_mediated_decay		8	-1	122974793	8481
ENSMUSG00000034990	protein_coding	Otoa	ENSMUST00000170106	protein_coding		7	1	121083408	721
ENSMUSG00000086363	lincRNA	A330102I10Rik	ENSMUST00000130109	lincRNA		13	1	29014472	501
ENSMUSG00000037752	protein_coding	Xkr8	ENSMUST00000045550	protein_coding	principal1	4	-1	132732546	4245
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000189581	antisense		7	-1	59975759	6861
ENSMUSG00000024423	protein_coding	Impact	ENSMUST00000234488	retained_intron		18	1	12986300	431
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000152071	protein_coding		18	1	82554470	2046
ENSMUSG00000112048	processed_pseudogene	Gm48750	ENSMUST00000217850	processed_pseudogene		10	1	9356155	378
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000185890	antisense		7	-1	59973457	756
ENSMUSG00000034990	protein_coding	Otoa	ENSMUST00000168311	protein_coding		7	1	121083424	348
ENSMUSG00000099381	processed_pseudogene	Gm18303	ENSMUST00000190055	processed_pseudogene		1	1	45905623	1176
ENSMUSG00000086363	lincRNA	A330102I10Rik	ENSMUST00000140415	lincRNA		13	1	29016293	682
ENSMUSG00000064061	protein_coding	Dzip3	ENSMUST00000114516	protein_coding	principal3	16	-1	48993941	3331
ENSMUSG00000024423	protein_coding	Impact	ENSMUST00000234793	retained_intron		18	1	12989665	785
ENSMUSG00000111627	lincRNA	Gm48749	ENSMUST00000214867	lincRNA		10	1	9336682	599
ENSMUSG00000037921	protein_coding	Ddx60	ENSMUST00000154398	protein_coding		8	1	61928087	2120
ENSMUSG00000060730	processed_pseudogene	Gm10086	ENSMUST00000136334	processed_pseudogene		5	1	108517179	354
ENSMUSG00000037752	protein_coding	Xkr8	ENSMUST00000150104	processed_transcript		4	-1	132732528	376
ENSMUSG00000099651	lincRNA	Gm29078	ENSMUST00000190611	lincRNA		Y	-1	34764675	356
ENSMUSG00000086363	lincRNA	A330102I10Rik	ENSMUST00000145801	lincRNA		13	1	29016708	737
ENSMUSG00000100826	processed_transcript	Snhg14	ENSMUST00000188976	antisense		7	-1	59974431	2193
ENSMUSG00000037752	protein_coding	Xkr8	ENSMUST00000143642	processed_transcript		4	-1	132732483	547
ENSMUSG00000064061	protein_coding	Dzip3	ENSMUST00000151950	protein_coding		16	-1	48929747	961
ENSMUSG00000101787	unprocessed_pseudogene	Gm20853	ENSMUST00000189591	unprocessed_pseudogene		Y	1	34781126	693
ENSMUSG00000002307	protein_coding	Daxx	ENSMUST00000079421	protein_coding	principal1	17	1	33909445	2581
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000064062	protein_coding	principal3	6	1	71831331	2728
ENSMUSG00000064061	protein_coding	Dzip3	ENSMUST00000123961	retained_intron		16	-1	48931293	1071
ENSMUSG00000037921	protein_coding	Ddx60	ENSMUST00000156980	protein_coding		8	1	61928089	605
ENSMUSG00000064061	protein_coding	Dzip3	ENSMUST00000133377	retained_intron		16	-1	48953956	563
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000166975	protein_coding		6	1	71831333	2469
ENSMUSG00000078442	protein_coding	Ccdc105	ENSMUST00000105383	protein_coding	principal1	10	-1	78753065	1714
ENSMUSG00000016498	protein_coding	Pdcd1lg2	ENSMUST00000112576	protein_coding	principal1	19	1	29410919	1649
ENSMUSG00000002307	protein_coding	Daxx	ENSMUST00000234670	processed_transcript		17	1	33909498	402
ENSMUSG00000002307	protein_coding	Daxx	ENSMUST00000173626	protein_coding		17	1	33909498	715
ENSMUSG00000035569	protein_coding	Ankrd11	ENSMUST00000098334	protein_coding	principal2	8	-1	123042020	8455
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000167244	retained_intron		6	1	71831379	2934
ENSMUSG00000111888	antisense	Gm46212	ENSMUST00000220256	antisense		10	1	14544490	1003
ENSMUSG00000016498	protein_coding	Pdcd1lg2	ENSMUST00000235164	protein_coding	principal1	19	1	29422059	1729
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000165331	protein_coding		6	1	71831380	885
ENSMUSG00000035569	protein_coding	Ankrd11	ENSMUST00000212337	retained_intron		8	-1	122903725	4257
ENSMUSG00000109776	processed_transcript	Gm30400	ENSMUST00000210562	antisense		10	1	78747130	2115
ENSMUSG00000071533	protein_coding	Pcnp	ENSMUST00000119981	protein_coding		16	-1	56024628	901
ENSMUSG00000035569	protein_coding	Ankrd11	ENSMUST00000212050	protein_coding		8	-1	122899780	1874
ENSMUSG00000049659	protein_coding	Aftph	ENSMUST00000146722	protein_coding	alternative2	11	-1	20727607	3763
ENSMUSG00000109776	processed_transcript	Gm30400	ENSMUST00000209307	retained_intron		10	1	78747159	2472
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000078139	protein_coding	principal3	4	-1	9669162	6694
ENSMUSG00000035569	protein_coding	Ankrd11	ENSMUST00000174833	retained_intron		8	-1	122974773	2934
ENSMUSG00000097055	antisense	Gm4419	ENSMUST00000226239	antisense		12	1	21417323	1431
ENSMUSG00000097855	antisense	A930007I19Rik	ENSMUST00000236439	antisense		19	-1	29520970	859
ENSMUSG00000097055	antisense	Gm4419	ENSMUST00000227593	antisense		12	1	21417877	532
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000108340	protein_coding	alternative2	4	-1	9669162	6646
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000114151	protein_coding	alternative2	6	1	71831410	2518
ENSMUSG00000097055	antisense	Gm4419	ENSMUST00000226634	antisense		12	1	21417877	721
ENSMUSG00000097055	antisense	Gm4419	ENSMUST00000228212	antisense		12	1	21417879	603
ENSMUSG00000097055	antisense	Gm4419	ENSMUST00000226397	antisense		12	1	21417879	336
ENSMUSG00000115194	processed_pseudogene	Gm48909	ENSMUST00000226751	processed_pseudogene		14	-1	48695981	381
ENSMUSG00000035569	protein_coding	Ankrd11	ENSMUST00000212937	protein_coding		8	-1	123042277	943
ENSMUSG00000097855	antisense	A930007I19Rik	ENSMUST00000181726	antisense		19	-1	29521994	2099
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000101301	protein_coding	alternative2	6	1	71831413	2299
ENSMUSG00000097055	antisense	Gm4419	ENSMUST00000226567	antisense		12	1	21417898	782
ENSMUSG00000097055	antisense	Gm4419	ENSMUST00000180671	antisense		12	1	21417911	1729
ENSMUSG00000115579	lincRNA	Gm49156	ENSMUST00000227438	lincRNA		14	-1	48740809	1432
ENSMUSG00000002307	protein_coding	Daxx	ENSMUST00000170075	protein_coding	principal1	17	1	33909601	2673
ENSMUSG00000097055	antisense	Gm4419	ENSMUST00000226706	antisense		12	1	21417941	554
ENSMUSG00000097055	antisense	Gm4419	ENSMUST00000227598	antisense		12	1	21420759	306
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000166938	protein_coding	alternative2	6	1	71831418	2413
ENSMUSG00000053161	protein_coding	Daw1	ENSMUST00000113436	protein_coding		1	1	83159762	1351
ENSMUSG00000097855	antisense	A930007I19Rik	ENSMUST00000180986	antisense		19	-1	29523159	1145
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000108339	protein_coding	alternative2	4	-1	9669344	6453
ENSMUSG00000097855	antisense	A930007I19Rik	ENSMUST00000180737	antisense		19	-1	29521989	2319
ENSMUSG00000002307	protein_coding	Daxx	ENSMUST00000172859	processed_transcript		17	1	33910226	520
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000207003	nonsense_mediated_decay		6	1	71831432	2187
ENSMUSG00000055963	protein_coding	Triqk	ENSMUST00000143186	protein_coding	principal1	4	1	12906838	888
ENSMUSG00000053161	protein_coding	Daw1	ENSMUST00000065436	protein_coding		1	1	83159762	1349
ENSMUSG00000035569	protein_coding	Ankrd11	ENSMUST00000098333	protein_coding	alternative2	8	-1	122915987	7995
ENSMUSG00000002307	protein_coding	Daxx	ENSMUST00000174541	protein_coding		17	1	33910277	788
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000171057	protein_coding		6	1	71831459	576
ENSMUSG00000002307	protein_coding	Daxx	ENSMUST00000174646	retained_intron		17	1	33912689	757
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000124408	processed_transcript		4	-1	9595689	2496
ENSMUSG00000049659	protein_coding	Aftph	ENSMUST00000035350	protein_coding	principal3	11	-1	20741589	3998
ENSMUSG00000053519	protein_coding	Kcnip1	ENSMUST00000101368	protein_coding		11	-1	33843461	2322
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000205371	retained_intron		6	1	71863549	3476
ENSMUSG00000034990	protein_coding	Otoa	ENSMUST00000165409	nonsense_mediated_decay		7	1	121118385	2642
ENSMUSG00000002307	protein_coding	Daxx	ENSMUST00000174146	protein_coding		17	1	33912750	558
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000206625	retained_intron		6	1	71870029	3050
ENSMUSG00000034990	protein_coding	Otoa	ENSMUST00000163275	nonsense_mediated_decay		7	1	121118390	2619
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000207015	retained_intron		6	1	71871133	1494
ENSMUSG00000113456	processed_pseudogene	Gm30738	ENSMUST00000221346	processed_pseudogene		12	1	61579674	502
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000206330	protein_coding		6	1	71871497	278
ENSMUSG00000113588	TEC	Gm48328	ENSMUST00000220943	TEC		12	1	61752546	1881
ENSMUSG00000035653	protein_coding	Lrfn5	ENSMUST00000130887	processed_transcript		12	1	61523150	1724
ENSMUSG00000049659	protein_coding	Aftph	ENSMUST00000177014	nonsense_mediated_decay		11	-1	20727142	4147
ENSMUSG00000002307	protein_coding	Daxx	ENSMUST00000173279	processed_transcript		17	1	33913559	601
ENSMUSG00000035653	protein_coding	Lrfn5	ENSMUST00000138980	processed_transcript		12	1	61523167	4009
ENSMUSG00000055963	protein_coding	Triqk	ENSMUST00000183345	protein_coding	principal1	4	1	12906858	3545
ENSMUSG00000052337	protein_coding	Immt	ENSMUST00000205628	protein_coding		6	1	71871536	903
ENSMUSG00000101973	processed_pseudogene	Gm29516	ENSMUST00000190402	processed_pseudogene		1	1	147990085	468
ENSMUSG00000049659	protein_coding	Aftph	ENSMUST00000177543	protein_coding	alternative2	11	-1	20741455	3082
ENSMUSG00000053161	protein_coding	Daw1	ENSMUST00000149342	nonsense_mediated_decay		1	1	83159769	1639
ENSMUSG00000055963	protein_coding	Triqk	ENSMUST00000156536	processed_transcript		4	1	12917967	851
ENSMUSG00000038507	protein_coding	Parp12	ENSMUST00000038398	protein_coding	principal1	6	-1	39118349	3231
ENSMUSG00000108681	processed_pseudogene	Gm17825	ENSMUST00000206836	processed_pseudogene		6	-1	71870005	794
ENSMUSG00000101043	unprocessed_pseudogene	Gm29075	ENSMUST00000185717	unprocessed_pseudogene		Y	1	34855792	696
ENSMUSG00000049659	protein_coding	Aftph	ENSMUST00000134841	retained_intron		11	-1	20692802	556
ENSMUSG00000108466	TEC	Gm44771	ENSMUST00000206975	TEC		6	-1	71831710	626
ENSMUSG00000049659	protein_coding	Aftph	ENSMUST00000176782	protein_coding		11	-1	20726172	877
ENSMUSG00000053161	protein_coding	Daw1	ENSMUST00000065403	protein_coding	principal1	1	1	83159781	1651
ENSMUSG00000031155	protein_coding	Pim2	ENSMUST00000126715	retained_intron		X	1	7878262	1100
ENSMUSG00000038507	protein_coding	Parp12	ENSMUST00000129916	retained_intron		6	-1	39091093	1009
ENSMUSG00000099390	lincRNA	Gm29225	ENSMUST00000188647	lincRNA		Y	-1	34967095	1498
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000120441	protein_coding		7	1	130865756	3777
ENSMUSG00000053161	protein_coding	Daw1	ENSMUST00000133079	retained_intron		1	1	83159752	620
ENSMUSG00000115779	antisense	4930592A05Rik	ENSMUST00000228272	antisense		15	-1	33653436	1006
ENSMUSG00000020387	protein_coding	Jade2	ENSMUST00000020655	protein_coding	principal2	11	-1	51857653	6273
ENSMUSG00000049659	protein_coding	Aftph	ENSMUST00000176585	retained_intron		11	-1	20712324	2829
ENSMUSG00000039158	protein_coding	Akna	ENSMUST00000035724	protein_coding	principal1	4	-1	63403354	5387
ENSMUSG00000037921	protein_coding	Ddx60	ENSMUST00000070631	protein_coding	principal2	8	1	61928089	6535
ENSMUSG00000080859	transcribed_processed_pseudogene	Rpl10-ps1	ENSMUST00000119438	transcribed_processed_pseudogene		2	-1	105554845	645
ENSMUSG00000049659	protein_coding	Aftph	ENSMUST00000134517	retained_intron		11	-1	20712250	798
ENSMUSG00000031458	protein_coding	Coprs	ENSMUST00000210249	retained_intron		8	-1	13887215	1958
ENSMUSG00000099390	lincRNA	Gm29225	ENSMUST00000188510	lincRNA		Y	-1	34966642	621
ENSMUSG00000099390	lincRNA	Gm29225	ENSMUST00000191180	lincRNA		Y	-1	34966642	437
ENSMUSG00000049659	protein_coding	Aftph	ENSMUST00000134897	retained_intron		11	-1	20712230	305
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000148513	retained_intron		7	1	130865885	2941
ENSMUSG00000084252	processed_pseudogene	Gm12036	ENSMUST00000120008	processed_pseudogene		11	1	20729420	530
ENSMUSG00000020387	protein_coding	Jade2	ENSMUST00000109090	protein_coding	alternative2	11	-1	51857653	6230
ENSMUSG00000112307	TEC	Gm48751	ENSMUST00000218957	TEC		10	-1	9487202	4274
ENSMUSG00000071533	protein_coding	Pcnp	ENSMUST00000125040	nonsense_mediated_decay		16	-1	56029696	2200
ENSMUSG00000084386	processed_pseudogene	Gm13852	ENSMUST00000122350	processed_pseudogene		6	1	32610119	242
ENSMUSG00000037921	protein_coding	Ddx60	ENSMUST00000153806	retained_intron		8	1	61984138	427
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000140153	retained_intron		7	1	130865887	517
ENSMUSG00000039158	protein_coding	Akna	ENSMUST00000140586	processed_transcript		4	-1	63381203	707
ENSMUSG00000106015	lincRNA	Gm42980	ENSMUST00000200582	lincRNA		5	1	127578750	1028
ENSMUSG00000106873	lincRNA	BC049739	ENSMUST00000202626	lincRNA		6	-1	32752288	660
ENSMUSG00000086227	lincRNA	Gm11820	ENSMUST00000139614	lincRNA		4	1	13076140	664
ENSMUSG00000037921	protein_coding	Ddx60	ENSMUST00000136121	retained_intron		8	1	62021060	3068
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000075181	protein_coding	principal1	7	1	130865898	2301
ENSMUSG00000020387	protein_coding	Jade2	ENSMUST00000151277	processed_transcript		11	-1	51857125	4552
ENSMUSG00000112827	processed_pseudogene	Gm48753	ENSMUST00000218436	processed_pseudogene		10	1	9513937	170
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000151119	protein_coding		7	1	130865903	2397
ENSMUSG00000037921	protein_coding	Ddx60	ENSMUST00000093485	protein_coding	alternative2	8	1	61928089	5989
ENSMUSG00000031458	protein_coding	Coprs	ENSMUST00000033839	protein_coding	principal1	8	-1	13890268	793
ENSMUSG00000086953	antisense	Aknaos	ENSMUST00000144095	antisense		4	1	63381358	1104
ENSMUSG00000094002	lincRNA	Gm9866	ENSMUST00000222954	lincRNA		12	-1	27160503	1057
ENSMUSG00000053519	protein_coding	Kcnip1	ENSMUST00000065970	protein_coding	principal3	11	-1	33843527	1749
ENSMUSG00000020387	protein_coding	Jade2	ENSMUST00000109091	protein_coding	principal2	11	-1	51857396	6099
ENSMUSG00000053519	protein_coding	Kcnip1	ENSMUST00000109340	protein_coding	alternative1	11	-1	33843585	1840
ENSMUSG00000094002	lincRNA	Gm9866	ENSMUST00000222838	lincRNA		12	-1	27160633	1580
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000048180	protein_coding		7	1	130865910	3321
ENSMUSG00000081053	unprocessed_pseudogene	Mup-ps17	ENSMUST00000120723	unprocessed_pseudogene		4	-1	61857876	218
ENSMUSG00000053519	protein_coding	Kcnip1	ENSMUST00000238903	protein_coding	alternative1	11	-1	33992988	1591
ENSMUSG00000094002	lincRNA	Gm9866	ENSMUST00000220998	lincRNA		12	-1	27114995	1973
ENSMUSG00000031458	protein_coding	Coprs	ENSMUST00000209371	protein_coding		8	-1	13889964	601
ENSMUSG00000053519	protein_coding	Kcnip1	ENSMUST00000238436	protein_coding		11	-1	33680571	699
ENSMUSG00000031458	protein_coding	Coprs	ENSMUST00000210188	retained_intron		8	-1	13889990	575
ENSMUSG00000082363	unprocessed_pseudogene	Mup-ps18	ENSMUST00000120145	unprocessed_pseudogene		4	-1	61883296	531
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000154282	retained_intron		7	1	130882352	153
ENSMUSG00000031458	protein_coding	Coprs	ENSMUST00000210749	retained_intron		8	-1	13890281	482
ENSMUSG00000053519	protein_coding	Kcnip1	ENSMUST00000154760	retained_intron		11	-1	33993152	4095
ENSMUSG00000035653	protein_coding	Lrfn5	ENSMUST00000055815	protein_coding		12	1	61523948	4410
ENSMUSG00000112878	lincRNA	1700042O05Rik	ENSMUST00000219017	lincRNA		10	1	51666989	584
ENSMUSG00000082730	processed_pseudogene	Gm11363	ENSMUST00000121672	processed_pseudogene		13	-1	29130758	548
ENSMUSG00000038034	protein_coding	Igsf8	ENSMUST00000139528	protein_coding		1	1	172261641	2866
ENSMUSG00000094002	lincRNA	Gm9866	ENSMUST00000182592	lincRNA		12	-1	27160633	8487
ENSMUSG00000053519	protein_coding	Kcnip1	ENSMUST00000135034	retained_intron		11	-1	33992988	2475
ENSMUSG00000068631	processed_pseudogene	Gm7676	ENSMUST00000084055	processed_pseudogene		8	1	13896311	319
ENSMUSG00000094002	lincRNA	Gm9866	ENSMUST00000182473	lincRNA		12	-1	27160311	1882
ENSMUSG00000038132	protein_coding	Rbm24	ENSMUST00000037923	protein_coding	principal1	13	1	46418434	3086
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000149029	retained_intron		7	1	130896991	774
ENSMUSG00000026831	protein_coding	1700007K13Rik	ENSMUST00000126242	processed_transcript		2	-1	28465852	666
ENSMUSG00000035653	protein_coding	Lrfn5	ENSMUST00000119481	protein_coding	principal1	12	1	61523948	3615
ENSMUSG00000094002	lincRNA	Gm9866	ENSMUST00000183238	lincRNA		12	-1	27160462	351
ENSMUSG00000031155	protein_coding	Pim2	ENSMUST00000033495	protein_coding	principal1	X	1	7878302	2045
ENSMUSG00000094002	lincRNA	Gm9866	ENSMUST00000177636	lincRNA		12	-1	27160446	486
ENSMUSG00000035653	protein_coding	Lrfn5	ENSMUST00000189933	retained_intron		12	1	61856268	2075
ENSMUSG00000071533	protein_coding	Pcnp	ENSMUST00000114444	protein_coding	principal1	16	-1	56029739	2295
ENSMUSG00000114083	transcribed_processed_pseudogene	Gm47860	ENSMUST00000221626	processed_transcript		12	-1	27266567	4028
ENSMUSG00000114083	transcribed_processed_pseudogene	Gm47860	ENSMUST00000221503	transcribed_processed_pseudogene		12	-1	27263506	352
ENSMUSG00000031155	protein_coding	Pim2	ENSMUST00000145177	processed_transcript		X	1	7878618	382
ENSMUSG00000038132	protein_coding	Rbm24	ENSMUST00000225221	retained_intron		13	1	46420092	391
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000136963	nonsense_mediated_decay		7	1	130900534	743
ENSMUSG00000038132	protein_coding	Rbm24	ENSMUST00000225727	processed_transcript		13	1	46420518	353
ENSMUSG00000071533	protein_coding	Pcnp	ENSMUST00000137736	processed_transcript		16	-1	56029686	733
ENSMUSG00000099629	lincRNA	Gm29515	ENSMUST00000188273	lincRNA		1	-1	148248378	2077
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000146111	retained_intron		7	1	130902245	726
ENSMUSG00000101208	processed_pseudogene	Gm19891	ENSMUST00000189771	processed_pseudogene		1	1	148498508	303
ENSMUSG00000047390	protein_coding	Defb9	ENSMUST00000057076	protein_coding	principal1	8	-1	21885421	310
ENSMUSG00000038132	protein_coding	Rbm24	ENSMUST00000224638	processed_transcript		13	1	46420551	679
ENSMUSG00000101735	processed_pseudogene	Gm18505	ENSMUST00000187360	processed_pseudogene		1	-1	148651134	790
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000126355	protein_coding		7	1	130904904	588
ENSMUSG00000038132	protein_coding	Rbm24	ENSMUST00000225890	retained_intron		13	1	46421822	437
ENSMUSG00000099842	processed_pseudogene	Gm4034	ENSMUST00000187674	processed_pseudogene		1	-1	148938376	480
ENSMUSG00000040268	protein_coding	Plekha1	ENSMUST00000135359	retained_intron		7	1	130905304	352
ENSMUSG00000071533	protein_coding	Pcnp	ENSMUST00000130818	nonsense_mediated_decay		16	-1	56029676	938
ENSMUSG00000071533	protein_coding	Pcnp	ENSMUST00000140227	processed_transcript		16	-1	56029706	446
ENSMUSG00000071533	protein_coding	Pcnp	ENSMUST00000096021	protein_coding		16	-1	56024668	608
ENSMUSG00000038034	protein_coding	Igsf8	ENSMUST00000085912	protein_coding	principal1	1	1	172311771	2182
ENSMUSG00000045337	protein_coding	Defb11	ENSMUST00000051965	protein_coding	principal1	8	-1	21906412	317
ENSMUSG00000038034	protein_coding	Igsf8	ENSMUST00000128508	protein_coding		1	1	172311938	623
ENSMUSG00000026831	protein_coding	1700007K13Rik	ENSMUST00000086370	protein_coding	principal1	2	-1	28466332	812
ENSMUSG00000118184	processed_pseudogene	Gm50144	ENSMUST00000235658	processed_pseudogene		18	1	35495448	580
ENSMUSG00000071533	protein_coding	Pcnp	ENSMUST00000122253	protein_coding		16	-1	56029696	792
ENSMUSG00000026831	protein_coding	1700007K13Rik	ENSMUST00000127683	protein_coding		2	-1	28466316	445
ENSMUSG00000118386	antisense	Gm50149	ENSMUST00000238050	antisense		18	1	35498661	478
ENSMUSG00000110618	lincRNA	Gm39822	ENSMUST00000212253	lincRNA		11	1	51898966	2284
ENSMUSG00000102101	antisense	Zbtb11os1	ENSMUST00000186480	antisense		16	-1	55974617	1350
ENSMUSG00000038034	protein_coding	Igsf8	ENSMUST00000039506	protein_coding	principal1	1	1	172312367	2278
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000236387	processed_transcript		18	-1	35343067	1532
ENSMUSG00000011349	protein_coding	Dmrtc2	ENSMUST00000011493	protein_coding	principal1	7	1	24870057	1619
ENSMUSG00000038034	protein_coding	Igsf8	ENSMUST00000194505	protein_coding		1	1	172318310	893
ENSMUSG00000038034	protein_coding	Igsf8	ENSMUST00000195659	protein_coding		1	1	172318760	467
ENSMUSG00000090249	lincRNA	Gm3287	ENSMUST00000228214	lincRNA		14	-1	44034723	1213
ENSMUSG00000038034	protein_coding	Igsf8	ENSMUST00000150598	processed_transcript		1	1	172318781	448
ENSMUSG00000090249	lincRNA	Gm3287	ENSMUST00000228893	lincRNA		14	-1	44037517	1332
ENSMUSG00000030859	protein_coding	Fam24a	ENSMUST00000207439	protein_coding	principal1	7	1	131333864	711
ENSMUSG00000016386	protein_coding	Mpped2	ENSMUST00000111063	protein_coding	principal1	2	1	106693269	2848
ENSMUSG00000073821	processed_transcript	8030451A03Rik	ENSMUST00000141428	processed_transcript		4	1	63979854	2618
ENSMUSG00000073821	processed_transcript	8030451A03Rik	ENSMUST00000135042	processed_transcript		4	1	63979943	969
ENSMUSG00000079049	protein_coding	Serpinb1c	ENSMUST00000021834	protein_coding	principal1	13	-1	32898211	1633
ENSMUSG00000073821	processed_transcript	8030451A03Rik	ENSMUST00000138411	processed_transcript		4	1	63979960	671
ENSMUSG00000073821	processed_transcript	8030451A03Rik	ENSMUST00000166003	processed_transcript		4	1	64148553	393
ENSMUSG00000039934	protein_coding	Gsap	ENSMUST00000198014	nonsense_mediated_decay		5	1	21186267	4250
ENSMUSG00000016386	protein_coding	Mpped2	ENSMUST00000016530	protein_coding	principal1	2	1	106695601	1217
ENSMUSG00000016386	protein_coding	Mpped2	ENSMUST00000144155	protein_coding		2	1	106695220	356
ENSMUSG00000016386	protein_coding	Mpped2	ENSMUST00000125023	protein_coding		2	1	106695854	1054
ENSMUSG00000030859	protein_coding	Fam24a	ENSMUST00000207784	protein_coding	principal1	7	1	131334498	600
ENSMUSG00000090249	lincRNA	Gm3287	ENSMUST00000160809	lincRNA		14	-1	44034740	1104
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000186239	protein_coding	alternative2	10	-1	41809613	2255
ENSMUSG00000026072	protein_coding	Il1r1	ENSMUST00000027241	protein_coding	principal3	1	1	40225080	5819
ENSMUSG00000079049	protein_coding	Serpinb1c	ENSMUST00000221019	nonsense_mediated_decay		13	-1	32898157	975
ENSMUSG00000113832	lincRNA	Gm40392	ENSMUST00000220656	lincRNA		12	1	36264925	562
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000189770	protein_coding	principal3	10	-1	41809868	2232
ENSMUSG00000090249	lincRNA	Gm3287	ENSMUST00000228605	lincRNA		14	-1	44037526	379
ENSMUSG00000022601	protein_coding	Zbtb11	ENSMUST00000050248	protein_coding	principal1	16	1	55973883	4920
ENSMUSG00000090249	lincRNA	Gm3287	ENSMUST00000163681	lincRNA		14	-1	44037526	1104
ENSMUSG00000039007	protein_coding	Cpq	ENSMUST00000042167	protein_coding	principal1	15	1	33083129	1923
ENSMUSG00000016386	protein_coding	Mpped2	ENSMUST00000124461	processed_transcript		2	1	106695623	806
ENSMUSG00000101074	processed_pseudogene	Gm29022	ENSMUST00000190702	processed_pseudogene		1	-1	148941321	225
ENSMUSG00000016386	protein_coding	Mpped2	ENSMUST00000133401	processed_transcript		2	1	106730490	694
ENSMUSG00000030859	protein_coding	Fam24a	ENSMUST00000084505	protein_coding	principal1	7	1	131334622	371
ENSMUSG00000039007	protein_coding	Cpq	ENSMUST00000227018	retained_intron		15	1	33083173	1014
ENSMUSG00000101564	processed_pseudogene	Gm5703	ENSMUST00000186658	processed_pseudogene		1	1	148975522	3973
ENSMUSG00000110616	antisense	Gm36879	ENSMUST00000212313	antisense		8	1	21906664	2060
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000190022	protein_coding		10	-1	41809607	1949
ENSMUSG00000022601	protein_coding	Zbtb11	ENSMUST00000183440	retained_intron		16	1	55988966	2815
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000187143	protein_coding	principal3	10	-1	41809871	1769
ENSMUSG00000022601	protein_coding	Zbtb11	ENSMUST00000184618	retained_intron		16	1	56005192	3159
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000191498	protein_coding		10	-1	41809622	759
ENSMUSG00000030946	protein_coding	Lhpp	ENSMUST00000148669	nonsense_mediated_decay		7	1	132610638	455
ENSMUSG00000048500	protein_coding	Defb15	ENSMUST00000062586	protein_coding	principal1	8	-1	21932710	345
ENSMUSG00000076432	protein_coding	Ywhaq	ENSMUST00000135088	protein_coding	principal1	12	-1	21417637	2197
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000185394	protein_coding		10	-1	41722911	557
ENSMUSG00000039007	protein_coding	Cpq	ENSMUST00000228916	protein_coding	principal1	15	1	33083252	1842
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000142850	protein_coding	alternative2	18	1	82554509	2056
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000237896	protein_coding		18	-1	35498869	1501
ENSMUSG00000026072	protein_coding	Il1r1	ENSMUST00000114795	protein_coding	alternative2	1	1	40266586	4832
ENSMUSG00000024990	protein_coding	Rbp4	ENSMUST00000025951	protein_coding		19	-1	38125248	1161
ENSMUSG00000072680	protein_coding	Tmem254c	ENSMUST00000100819	protein_coding	principal1	14	-1	26067355	1211
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000080658	protein_coding		18	1	82554513	1993
ENSMUSG00000039007	protein_coding	Cpq	ENSMUST00000226483	protein_coding		15	1	33083256	629
ENSMUSG00000026072	protein_coding	Il1r1	ENSMUST00000195402	processed_transcript		1	1	40266657	473
ENSMUSG00000039116	protein_coding	Adgrg6	ENSMUST00000041168	protein_coding	principal2	10	-1	14545036	6507
ENSMUSG00000039007	protein_coding	Cpq	ENSMUST00000226814	retained_intron		15	1	33083258	2735
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000133193	protein_coding		18	1	82554516	1922
ENSMUSG00000039007	protein_coding	Cpq	ENSMUST00000228737	protein_coding		15	1	33083268	746
ENSMUSG00000072680	protein_coding	Tmem254c	ENSMUST00000100818	protein_coding		14	-1	26066961	1066
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000108333	protein_coding		4	-1	9643717	2652
ENSMUSG00000039007	protein_coding	Cpq	ENSMUST00000226896	retained_intron		15	1	33090308	3124
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000187935	retained_intron		10	-1	41746638	911
ENSMUSG00000076432	protein_coding	Ywhaq	ENSMUST00000103002	protein_coding	principal1	12	-1	21417436	2110
ENSMUSG00000039116	protein_coding	Adgrg6	ENSMUST00000238680	protein_coding	alternative2	10	-1	14545036	4482
ENSMUSG00000090237	antisense	Gm16308	ENSMUST00000162171	antisense		15	1	71810108	940
ENSMUSG00000058101	transcribed_processed_pseudogene	1700084J12Rik	ENSMUST00000187707	processed_transcript		15	-1	33405976	1992
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000189222	retained_intron		10	-1	41809612	711
ENSMUSG00000072680	protein_coding	Tmem254c	ENSMUST00000184440	retained_intron		14	-1	26065541	418
ENSMUSG00000039116	protein_coding	Adgrg6	ENSMUST00000208429	protein_coding	alternative2	10	-1	14545659	4326
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000108334	protein_coding		4	-1	9643717	2685
ENSMUSG00000058101	transcribed_processed_pseudogene	1700084J12Rik	ENSMUST00000079057	transcribed_processed_pseudogene		15	-1	33405939	734
ENSMUSG00000036169	protein_coding	Sostdc1	ENSMUST00000041407	protein_coding	principal1	12	1	36314139	1781
ENSMUSG00000024990	protein_coding	Rbp4	ENSMUST00000112335	protein_coding	principal1	19	-1	38124828	937
ENSMUSG00000098274	protein_coding	Rpl24	ENSMUST00000023269	protein_coding	principal1	16	1	55966275	677
ENSMUSG00000103560	TEC	Gm38070	ENSMUST00000191850	TEC		1	1	40238020	6480
ENSMUSG00000039116	protein_coding	Adgrg6	ENSMUST00000208905	processed_transcript		10	-1	14545179	443
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000188514	retained_intron		10	-1	41809630	1240
ENSMUSG00000082378	unprocessed_pseudogene	Olfr408-ps1	ENSMUST00000121710	unprocessed_pseudogene		11	-1	74299073	941
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000108335	protein_coding		4	-1	9643717	2514
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000215496	processed_transcript		10	-1	41809630	1578
ENSMUSG00000074973	unprocessed_pseudogene	Gm11382	ENSMUST00000140484	unprocessed_pseudogene		13	-1	32938691	179
ENSMUSG00000039116	protein_coding	Adgrg6	ENSMUST00000207953	retained_intron		10	-1	14544995	5121
ENSMUSG00000071532	processed_pseudogene	Gm10335	ENSMUST00000096020	processed_pseudogene		10	1	14523078	468
ENSMUSG00000076432	protein_coding	Ywhaq	ENSMUST00000155480	protein_coding		12	-1	21417588	1970
ENSMUSG00000024990	protein_coding	Rbp4	ENSMUST00000236283	protein_coding		19	-1	38124725	410
ENSMUSG00000083886	polymorphic_pseudogene	Olfr409-ps1	ENSMUST00000118809	polymorphic_pseudogene	principal1	11	1	74317027	971
ENSMUSG00000110681	unprocessed_pseudogene	Gm45796	ENSMUST00000212483	unprocessed_pseudogene		8	1	21935351	114
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000084915	protein_coding		4	-1	9669162	2884
ENSMUSG00000024990	protein_coding	Rbp4	ENSMUST00000237287	protein_coding		19	-1	38125281	581
ENSMUSG00000101255	unprocessed_pseudogene	Gm21841	ENSMUST00000189958	unprocessed_pseudogene		Y	-1	71365009	696
ENSMUSG00000076432	protein_coding	Ywhaq	ENSMUST00000140710	processed_transcript		12	-1	21417130	703
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000108337	protein_coding		4	-1	9669162	2836
ENSMUSG00000076432	protein_coding	Ywhaq	ENSMUST00000146206	retained_intron		12	-1	21398749	682
ENSMUSG00000058052	protein_coding	Defb35	ENSMUST00000076786	protein_coding	principal1	8	1	21938352	267
ENSMUSG00000108654	unprocessed_pseudogene	Gm9519	ENSMUST00000206108	unprocessed_pseudogene		7	-1	17650345	1337
ENSMUSG00000098274	protein_coding	Rpl24	ENSMUST00000137811	processed_transcript		16	1	55966421	639
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000235619	protein_coding		18	-1	35498894	1524
ENSMUSG00000114141	lincRNA	Gm34215	ENSMUST00000223024	lincRNA		12	1	36326341	492
ENSMUSG00000098274	protein_coding	Rpl24	ENSMUST00000126419	retained_intron		16	1	55966547	452
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000152058	processed_transcript		4	-1	9639260	557
ENSMUSG00000114141	lincRNA	Gm34215	ENSMUST00000221599	lincRNA		12	1	36330479	355
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000152526	protein_coding		4	-1	9643717	615
ENSMUSG00000098274	protein_coding	Rpl24	ENSMUST00000128581	retained_intron		16	1	55969995	306
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000105505	protein_coding	principal3	10	-1	41745931	2071
ENSMUSG00000030946	protein_coding	Lhpp	ENSMUST00000033241	protein_coding	principal1	7	1	132610639	1612
ENSMUSG00000041536	protein_coding	Serpina3a	ENSMUST00000109965	protein_coding		12	1	104112724	1204
ENSMUSG00000019813	protein_coding	Cep57l1	ENSMUST00000019951	protein_coding	alternative2	10	-1	41809607	2177
ENSMUSG00000025200	protein_coding	Cwf19l1	ENSMUST00000026218	protein_coding	principal1	19	-1	44135876	3581
ENSMUSG00000100009	lincRNA	Gm7967	ENSMUST00000191042	lincRNA		1	1	98589517	5042
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000123251	protein_coding	principal4	18	1	82554530	638
ENSMUSG00000030946	protein_coding	Lhpp	ENSMUST00000106170	protein_coding		7	1	132610667	999
ENSMUSG00000041536	protein_coding	Serpina3a	ENSMUST00000185595	protein_coding	principal1	12	1	104112780	1720
ENSMUSG00000100009	lincRNA	Gm7967	ENSMUST00000191409	lincRNA		1	1	98589517	1049
ENSMUSG00000053565	protein_coding	Eif3k	ENSMUST00000066070	protein_coding	principal1	7	-1	28981814	774
ENSMUSG00000042626	protein_coding	Shc1	ENSMUST00000039110	protein_coding	principal3	3	1	89418443	3250
ENSMUSG00000102114	antisense	BC048559	ENSMUST00000215667	antisense		10	1	41746721	3561
ENSMUSG00000100009	lincRNA	Gm7967	ENSMUST00000190991	lincRNA		1	1	98589518	399
ENSMUSG00000094777	protein_coding	Hist1h2ap	ENSMUST00000081342	protein_coding	principal1	13	-1	21833507	482
ENSMUSG00000041536	protein_coding	Serpina3a	ENSMUST00000021496	protein_coding	principal1	12	1	104115970	1269
ENSMUSG00000102114	antisense	BC048559	ENSMUST00000190793	antisense		10	1	41746746	417
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000153478	protein_coding		18	1	82554546	2070
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000025215	protein_coding	principal1	18	-1	35498929	1703
ENSMUSG00000053565	protein_coding	Eif3k	ENSMUST00000207683	protein_coding		7	-1	28981787	647
ENSMUSG00000083299	processed_pseudogene	Gm12332	ENSMUST00000121397	processed_pseudogene		11	1	74322546	922
ENSMUSG00000028948	protein_coding	Nol9	ENSMUST00000147797	retained_intron		4	1	152039321	2419
ENSMUSG00000118063	processed_pseudogene	Gm50366	ENSMUST00000236532	processed_pseudogene		18	1	54868100	434
ENSMUSG00000030946	protein_coding	Lhpp	ENSMUST00000133969	nonsense_mediated_decay		7	1	132610708	620
ENSMUSG00000053565	protein_coding	Eif3k	ENSMUST00000208616	protein_coding		7	-1	28981864	909
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000237253	processed_transcript		18	-1	35299815	570
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000237309	protein_coding		18	-1	35325455	695
ENSMUSG00000042626	protein_coding	Shc1	ENSMUST00000125036	protein_coding		3	1	89418551	679
ENSMUSG00000030946	protein_coding	Lhpp	ENSMUST00000209903	processed_transcript		7	1	132620774	1590
ENSMUSG00000030946	protein_coding	Lhpp	ENSMUST00000210168	processed_transcript		7	1	132620789	1733
ENSMUSG00000053565	protein_coding	Eif3k	ENSMUST00000208810	retained_intron		7	-1	28974836	537
ENSMUSG00000030946	protein_coding	Lhpp	ENSMUST00000130672	retained_intron		7	1	132630371	497
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000235778	protein_coding		18	-1	35498876	342
ENSMUSG00000042626	protein_coding	Shc1	ENSMUST00000154791	protein_coding		3	1	89418571	497
ENSMUSG00000108910	TEC	Gm44625	ENSMUST00000207838	TEC		7	-1	131402796	1561
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000237232	protein_coding		18	-1	35499780	453
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000084912	protein_coding		4	-1	9669162	742
ENSMUSG00000028948	protein_coding	Nol9	ENSMUST00000105663	retained_intron		4	1	152039336	2064
ENSMUSG00000049482	protein_coding	Ctu2	ENSMUST00000116412	protein_coding	principal1	8	1	122476143	3066
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000236007	protein_coding		18	-1	35498862	538
ENSMUSG00000042626	protein_coding	Shc1	ENSMUST00000128238	protein_coding		3	1	89418594	906
ENSMUSG00000025200	protein_coding	Cwf19l1	ENSMUST00000237067	processed_transcript		19	-1	44135625	4068
ENSMUSG00000021373	protein_coding	Cap2	ENSMUST00000021802	protein_coding	principal1	13	1	46501848	3713
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000235524	protein_coding		18	-1	35498876	335
ENSMUSG00000025200	protein_coding	Cwf19l1	ENSMUST00000235288	processed_transcript		19	-1	44122369	1470
ENSMUSG00000042626	protein_coding	Shc1	ENSMUST00000107417	protein_coding		3	1	89418614	3079
ENSMUSG00000029044	lincRNA	4930584F24Rik	ENSMUST00000198070	lincRNA		5	-1	26493289	1163
ENSMUSG00000025200	protein_coding	Cwf19l1	ENSMUST00000237250	processed_transcript		19	-1	44112998	771
ENSMUSG00000025200	protein_coding	Cwf19l1	ENSMUST00000237939	nonsense_mediated_decay		19	-1	44135861	963
ENSMUSG00000021373	protein_coding	Cap2	ENSMUST00000119341	protein_coding		13	1	46502125	2454
ENSMUSG00000031796	protein_coding	Cfap20	ENSMUST00000212731	retained_intron		8	-1	95434757	4182
ENSMUSG00000042626	protein_coding	Shc1	ENSMUST00000153334	retained_intron		3	1	89420633	2775
ENSMUSG00000024357	protein_coding	Sil1	ENSMUST00000235691	protein_coding		18	-1	35498877	355
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000103004	protein_coding		4	-1	9643717	1762
ENSMUSG00000029044	lincRNA	4930584F24Rik	ENSMUST00000197091	lincRNA		5	-1	26493314	954
ENSMUSG00000021373	protein_coding	Cap2	ENSMUST00000225824	protein_coding		13	1	46502166	1634
ENSMUSG00000117731	antisense	Gm50145	ENSMUST00000237123	antisense		18	1	35489104	538
ENSMUSG00000053565	protein_coding	Eif3k	ENSMUST00000207762	retained_intron		7	-1	28981783	1782
ENSMUSG00000030858	protein_coding	Fam24b	ENSMUST00000188899	protein_coding	principal1	7	-1	131329516	680
ENSMUSG00000117876	antisense	Gm50146	ENSMUST00000236119	antisense		18	1	35264029	673
ENSMUSG00000030858	protein_coding	Fam24b	ENSMUST00000033146	protein_coding	principal1	7	-1	131327325	360
ENSMUSG00000029044	lincRNA	4930584F24Rik	ENSMUST00000030910	lincRNA		5	-1	26493278	762
ENSMUSG00000049482	protein_coding	Ctu2	ENSMUST00000151855	nonsense_mediated_decay		8	1	122476209	3999
ENSMUSG00000025200	protein_coding	Cwf19l1	ENSMUST00000237415	nonsense_mediated_decay		19	-1	44135842	794
ENSMUSG00000042626	protein_coding	Shc1	ENSMUST00000094378	protein_coding	alternative1	3	1	89421628	2617
ENSMUSG00000053565	protein_coding	Eif3k	ENSMUST00000208707	nonsense_mediated_decay		7	-1	28981805	578
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000038564	protein_coding		4	-1	9669162	1174
ENSMUSG00000029044	lincRNA	4930584F24Rik	ENSMUST00000196508	lincRNA		5	-1	26493289	820
ENSMUSG00000097595	processed_transcript	1500002F19Rik	ENSMUST00000209767	bidirectional_promoter_lncRNA		7	-1	132931197	599
ENSMUSG00000025200	protein_coding	Cwf19l1	ENSMUST00000236156	nonsense_mediated_decay		19	-1	44135873	764
ENSMUSG00000049482	protein_coding	Ctu2	ENSMUST00000146634	protein_coding		8	1	122476213	350
ENSMUSG00000105491	processed_pseudogene	Gm42844	ENSMUST00000200355	processed_pseudogene		5	1	26599438	112
ENSMUSG00000021373	protein_coding	Cap2	ENSMUST00000225444	retained_intron		13	1	46609514	763
ENSMUSG00000097595	processed_transcript	1500002F19Rik	ENSMUST00000211184	antisense		7	-1	132888687	375
ENSMUSG00000020522	protein_coding	Mfap3	ENSMUST00000108849	protein_coding	principal1	11	1	57518664	4827
ENSMUSG00000042626	protein_coding	Shc1	ENSMUST00000137793	protein_coding		3	1	89421642	951
ENSMUSG00000082644	unprocessed_pseudogene	Mup-ps19	ENSMUST00000120390	unprocessed_pseudogene		4	-1	61959911	519
ENSMUSG00000025200	protein_coding	Cwf19l1	ENSMUST00000236626	processed_transcript		19	-1	44133498	467
ENSMUSG00000021373	protein_coding	Cap2	ENSMUST00000126687	nonsense_mediated_decay		13	1	46640058	360
ENSMUSG00000097595	processed_transcript	1500002F19Rik	ENSMUST00000180905	bidirectional_promoter_lncRNA		7	-1	132931103	712
ENSMUSG00000114752	bidirectional_promoter_lncRNA	Gm35110	ENSMUST00000225579	bidirectional_promoter_lncRNA		13	-1	46501970	1842
ENSMUSG00000114752	bidirectional_promoter_lncRNA	Gm35110	ENSMUST00000226076	bidirectional_promoter_lncRNA		13	-1	46501984	1792
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000146441	protein_coding		4	-1	9669162	2576
ENSMUSG00000042626	protein_coding	Shc1	ENSMUST00000146306	processed_transcript		3	1	89424526	748
ENSMUSG00000110282	TEC	B930086L07Rik	ENSMUST00000209529	TEC		7	-1	133120271	3738
ENSMUSG00000108711	lincRNA	Gm38991	ENSMUST00000205504	lincRNA		7	1	36097378	138
ENSMUSG00000042626	protein_coding	Shc1	ENSMUST00000191485	protein_coding	principal3	3	1	89418551	3154
ENSMUSG00000114596	antisense	Gm47523	ENSMUST00000225040	antisense		13	-1	46619780	471
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000226501	protein_coding	principal3	14	-1	48667515	2592
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000098275	protein_coding		4	-1	9669162	1007
ENSMUSG00000020522	protein_coding	Mfap3	ENSMUST00000020830	protein_coding	principal1	11	1	57518687	4839
ENSMUSG00000069303	protein_coding	Hist1h2br	ENSMUST00000180288	protein_coding	principal1	13	1	21833743	1256
ENSMUSG00000067351	processed_pseudogene	Rps15a-ps2	ENSMUST00000087473	processed_pseudogene		19	-1	28742551	393
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000131605	protein_coding		4	-1	9669321	457
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000227404	protein_coding	principal3	14	-1	48673819	2086
ENSMUSG00000020522	protein_coding	Mfap3	ENSMUST00000108848	protein_coding		11	1	57522964	627
ENSMUSG00000020624	lincRNA	4933434M16Rik	ENSMUST00000149136	lincRNA		11	1	112825154	986
ENSMUSG00000049482	protein_coding	Ctu2	ENSMUST00000154099	retained_intron		8	1	122476213	2388
ENSMUSG00000020392	protein_coding	Cdkn2aipnl	ENSMUST00000102763	protein_coding	principal1	11	1	51967661	1832
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000075372	protein_coding		18	1	82554580	354
ENSMUSG00000020624	lincRNA	4933434M16Rik	ENSMUST00000153429	lincRNA		11	1	112825179	1940
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000102812	protein_coding	alternative2	18	1	82554580	576
ENSMUSG00000049482	protein_coding	Ctu2	ENSMUST00000134127	protein_coding		8	1	122476220	755
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000137375	processed_transcript		4	-1	9643717	3187
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000062446	protein_coding		18	1	82554580	531
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000114674	protein_coding		18	1	82554580	432
ENSMUSG00000069303	protein_coding	Hist1h2br	ENSMUST00000110467	nonsense_mediated_decay		13	1	21833758	2197
ENSMUSG00000039563	lincRNA	2210406O10Rik	ENSMUST00000149687	lincRNA		5	-1	36464821	1198
ENSMUSG00000028207	protein_coding	Asph	ENSMUST00000130617	processed_transcript		4	-1	9669086	506
ENSMUSG00000020522	protein_coding	Mfap3	ENSMUST00000128971	retained_intron		11	1	57518686	1258
ENSMUSG00000080770	processed_pseudogene	Gm11278	ENSMUST00000121002	processed_pseudogene		13	-1	21876229	997
ENSMUSG00000020392	protein_coding	Cdkn2aipnl	ENSMUST00000127136	nonsense_mediated_decay		11	1	51967892	637
ENSMUSG00000039563	lincRNA	2210406O10Rik	ENSMUST00000122882	lincRNA		5	-1	36464812	1743
ENSMUSG00000086028	lincRNA	Gm12243	ENSMUST00000128521	lincRNA		11	1	57572512	821
ENSMUSG00000049482	protein_coding	Ctu2	ENSMUST00000149925	retained_intron		8	1	122476243	713
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000132369	protein_coding	alternative2	18	1	82554580	1947
ENSMUSG00000086233	antisense	Gm11816	ENSMUST00000149848	antisense		4	-1	9287391	714
ENSMUSG00000049482	protein_coding	Ctu2	ENSMUST00000128472	retained_intron		8	1	122476693	413
ENSMUSG00000117961	lincRNA	Gm50265	ENSMUST00000235466	lincRNA		18	-1	34053034	1672
ENSMUSG00000084309	unprocessed_pseudogene	Mup-ps20	ENSMUST00000121132	unprocessed_pseudogene		4	-1	62014857	389
ENSMUSG00000118246	processed_pseudogene	Gm6052	ENSMUST00000236132	processed_pseudogene		18	1	34046826	466
ENSMUSG00000086233	antisense	Gm11816	ENSMUST00000142744	antisense		4	-1	9287333	353
ENSMUSG00000039563	lincRNA	2210406O10Rik	ENSMUST00000151434	lincRNA		5	-1	36464853	714
ENSMUSG00000087564	antisense	Gm11817	ENSMUST00000155578	antisense		4	-1	9447199	685
ENSMUSG00000041607	protein_coding	Mbp	ENSMUST00000150952	processed_transcript		18	1	82563262	660
ENSMUSG00000049482	protein_coding	Ctu2	ENSMUST00000131934	retained_intron		8	1	122480922	560
ENSMUSG00000049482	protein_coding	Ctu2	ENSMUST00000136253	protein_coding		8	1	122480957	438
ENSMUSG00000039563	lincRNA	2210406O10Rik	ENSMUST00000044964	lincRNA		5	-1	36464811	937
ENSMUSG00000049482	protein_coding	Ctu2	ENSMUST00000212499	protein_coding		8	1	122481345	244
ENSMUSG00000090737	processed_pseudogene	Gm6788	ENSMUST00000166459	processed_pseudogene		19	-1	28763430	270
ENSMUSG00000098184	bidirectional_promoter_lncRNA	Gm27011	ENSMUST00000182352	bidirectional_promoter_lncRNA		8	-1	121950645	972
ENSMUSG00000097438	lincRNA	Gm26784	ENSMUST00000181666	lincRNA		8	1	121434980	410
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000202945	protein_coding		7	1	59228750	3889
ENSMUSG00000108558	transcribed_unprocessed_pseudogene	Psg-ps1	ENSMUST00000165490	transcribed_unprocessed_pseudogene		7	1	17672292	1574
ENSMUSG00000092418	antisense	Gm20406	ENSMUST00000173993	antisense		8	1	121806415	423
ENSMUSG00000108558	transcribed_unprocessed_pseudogene	Psg-ps1	ENSMUST00000206181	processed_transcript		7	1	17672292	1943
ENSMUSG00000085719	antisense	4933424L21Rik	ENSMUST00000142486	antisense		11	-1	57649494	1186
ENSMUSG00000081576	processed_pseudogene	Gm11279	ENSMUST00000121524	processed_pseudogene		13	1	21903156	1256
ENSMUSG00000097424	bidirectional_promoter_lncRNA	1700030M09Rik	ENSMUST00000181133	bidirectional_promoter_lncRNA		8	1	121544382	618
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000122009	protein_coding	principal3	14	-1	48662872	1737
ENSMUSG00000118054	processed_pseudogene	Gm5238	ENSMUST00000238048	processed_pseudogene		18	-1	34125717	466
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000144711	protein_coding	principal3	8	-1	54718679	4720
ENSMUSG00000042599	protein_coding	Kdm7a	ENSMUST00000002305	protein_coding	principal1	6	-1	39206789	9566
ENSMUSG00000092094	protein_coding	Zfp804b	ENSMUST00000200317	protein_coding	principal1	5	-1	7344756	4430
ENSMUSG00000097424	bidirectional_promoter_lncRNA	1700030M09Rik	ENSMUST00000181679	bidirectional_promoter_lncRNA		8	1	121544388	964
ENSMUSG00000043162	protein_coding	Pyurf	ENSMUST00000053386	protein_coding	principal1	6	-1	57692078	3573
ENSMUSG00000081480	processed_pseudogene	Gm13608	ENSMUST00000121807	processed_pseudogene		2	1	31985059	1406
ENSMUSG00000092094	protein_coding	Zfp804b	ENSMUST00000164784	protein_coding		5	-1	6876523	3924
ENSMUSG00000105980	TEC	Gm42597	ENSMUST00000196663	TEC		5	-1	7262399	1544
ENSMUSG00000104204	TEC	Gm37397	ENSMUST00000194579	TEC		6	-1	57687580	2842
ENSMUSG00000097656	transcribed_unprocessed_pseudogene	Gm26712	ENSMUST00000180813	transcribed_unprocessed_pseudogene		6	-1	57689649	217
ENSMUSG00000105832	processed_pseudogene	Gm43841	ENSMUST00000199491	processed_pseudogene		5	1	7276324	586
ENSMUSG00000090157	processed_transcript	Gm16534	ENSMUST00000149300	processed_transcript		2	-1	32064164	1492
ENSMUSG00000105711	TEC	Gm42598	ENSMUST00000200110	TEC		5	-1	7235837	2437
ENSMUSG00000022821	protein_coding	Hgd	ENSMUST00000160847	protein_coding	principal1	16	1	37580153	1702
ENSMUSG00000090157	processed_transcript	Gm16534	ENSMUST00000156387	processed_transcript		2	-1	32064911	749
ENSMUSG00000078917	processed_pseudogene	Gm11281	ENSMUST00000141391	processed_pseudogene		13	-1	21953628	576
ENSMUSG00000040514	protein_coding	Tex47	ENSMUST00000196680	processed_transcript		5	1	7304119	373
ENSMUSG00000042599	protein_coding	Kdm7a	ENSMUST00000127036	processed_transcript		6	-1	39154682	3077
ENSMUSG00000098069	processed_pseudogene	Gm26942	ENSMUST00000182854	processed_pseudogene		19	-1	28813202	797
ENSMUSG00000085393	bidirectional_promoter_lncRNA	Gm11280	ENSMUST00000124912	bidirectional_promoter_lncRNA		13	-1	21945197	268
ENSMUSG00000022821	protein_coding	Hgd	ENSMUST00000159787	protein_coding		16	1	37580250	1516
ENSMUSG00000081265	processed_pseudogene	Gm11282	ENSMUST00000119018	processed_pseudogene		13	-1	21958123	1416
ENSMUSG00000040514	protein_coding	Tex47	ENSMUST00000088796	protein_coding	principal1	5	1	7304125	1085
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000119070	protein_coding	alternative1	14	-1	48667513	1708
ENSMUSG00000050592	protein_coding	Fam78a	ENSMUST00000139629	nonsense_mediated_decay		2	-1	32084669	3236
ENSMUSG00000073144	antisense	4930599N23Rik	ENSMUST00000146981	antisense		6	1	39118473	880
ENSMUSG00000040514	protein_coding	Tex47	ENSMUST00000160634	protein_coding	principal1	5	1	7304132	2881
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000127511	protein_coding	alternative2	8	-1	54724388	4668
ENSMUSG00000106976	TEC	Gm42963	ENSMUST00000202943	TEC		6	-1	39126381	1217
ENSMUSG00000022821	protein_coding	Hgd	ENSMUST00000161193	retained_intron		16	1	37580254	1296
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000135279	processed_transcript		14	-1	48661932	737
ENSMUSG00000040514	protein_coding	Tex47	ENSMUST00000159546	protein_coding	principal1	5	1	7304146	1402
ENSMUSG00000095159	processed_pseudogene	Tubb4b-ps1	ENSMUST00000179460	processed_pseudogene		5	1	7179365	1336
ENSMUSG00000022821	protein_coding	Hgd	ENSMUST00000162918	processed_transcript		16	1	37580282	616
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000074339	protein_coding	alternative2	3	-1	95754862	2313
ENSMUSG00000099688	unprocessed_pseudogene	Gm29535	ENSMUST00000185723	unprocessed_pseudogene		Y	1	9365390	109
ENSMUSG00000037108	protein_coding	Zcwpw1	ENSMUST00000035852	protein_coding	principal1	5	1	137787798	2222
ENSMUSG00000022821	protein_coding	Hgd	ENSMUST00000159938	processed_transcript		16	1	37621849	577
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000152018	protein_coding		14	-1	48667644	1033
ENSMUSG00000029196	protein_coding	Tada2b	ENSMUST00000031097	protein_coding	principal1	5	-1	36484285	3791
ENSMUSG00000037108	protein_coding	Zcwpw1	ENSMUST00000200505	retained_intron		5	1	137792666	3211
ENSMUSG00000116723	antisense	Gm46559	ENSMUST00000231668	antisense		16	-1	37596190	305
ENSMUSG00000037108	protein_coding	Zcwpw1	ENSMUST00000127541	retained_intron		5	1	137799189	659
ENSMUSG00000108502	processed_pseudogene	Gm9240	ENSMUST00000206527	processed_pseudogene		7	-1	121223994	742
ENSMUSG00000029196	protein_coding	Tada2b	ENSMUST00000119916	protein_coding		5	-1	36484112	1321
ENSMUSG00000064037	protein_coding	Gpn1	ENSMUST00000076949	protein_coding	principal1	5	1	31494741	3144
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000144465	protein_coding		14	-1	48667508	723
ENSMUSG00000108627	lincRNA	Gm45079	ENSMUST00000205627	lincRNA		7	1	121257359	461
ENSMUSG00000037108	protein_coding	Zcwpw1	ENSMUST00000128946	processed_transcript		5	1	137799418	583
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000133479	protein_coding		14	-1	48667508	618
ENSMUSG00000108697	TEC	4930486N12Rik	ENSMUST00000206668	TEC		7	-1	121259395	632
ENSMUSG00000037108	protein_coding	Zcwpw1	ENSMUST00000141642	protein_coding		5	1	137810829	806
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000119739	protein_coding		14	-1	48665521	516
ENSMUSG00000050592	protein_coding	Fam78a	ENSMUST00000056406	protein_coding	principal1	2	-1	32083783	4107
ENSMUSG00000029097	protein_coding	Trmt44	ENSMUST00000030980	protein_coding	principal1	5	-1	35575070	3790
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000228512	retained_intron		14	-1	48667518	801
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000175915	protein_coding	alternative2	8	-1	54724504	4619
ENSMUSG00000031796	protein_coding	Cfap20	ENSMUST00000034249	protein_coding	principal1	8	-1	95434869	1295
ENSMUSG00000050592	protein_coding	Fam78a	ENSMUST00000130178	processed_transcript		2	-1	32079352	525
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000034398	protein_coding		9	-1	13827107	2523
ENSMUSG00000050592	protein_coding	Fam78a	ENSMUST00000143795	processed_transcript		2	-1	32084857	368
ENSMUSG00000029097	protein_coding	Trmt44	ENSMUST00000145930	retained_intron		5	-1	35575051	2192
ENSMUSG00000031796	protein_coding	Cfap20	ENSMUST00000213086	protein_coding		8	-1	95434844	2544
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000142494	nonsense_mediated_decay		9	-1	13826991	2173
ENSMUSG00000021848	protein_coding	Otx2	ENSMUST00000118578	protein_coding	principal3	14	-1	48665106	2144
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000128850	retained_intron		8	-1	54648433	1271
ENSMUSG00000064037	protein_coding	Gpn1	ENSMUST00000201881	retained_intron		5	1	31494752	4679
ENSMUSG00000029097	protein_coding	Trmt44	ENSMUST00000128195	protein_coding		5	-1	35574674	375
ENSMUSG00000031796	protein_coding	Cfap20	ENSMUST00000212579	retained_intron		8	-1	95421533	697
ENSMUSG00000115429	TEC	Gm49153	ENSMUST00000227165	TEC		14	1	48704184	1937
ENSMUSG00000115008	processed_transcript	4933429O19Rik	ENSMUST00000227742	retained_intron		14	1	48878586	1508
ENSMUSG00000083524	unprocessed_pseudogene	Mup-ps21	ENSMUST00000119998	unprocessed_pseudogene		4	-1	62031662	448
ENSMUSG00000064037	protein_coding	Gpn1	ENSMUST00000202394	protein_coding		5	1	31494753	631
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000150488	protein_coding	alternative2	8	-1	54724368	4129
ENSMUSG00000031796	protein_coding	Cfap20	ENSMUST00000212684	nonsense_mediated_decay		8	-1	95434830	1023
ENSMUSG00000039934	protein_coding	Gsap	ENSMUST00000036031	protein_coding	principal1	5	1	21186289	3745
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000153074	retained_intron		8	-1	54653998	405
ENSMUSG00000034488	protein_coding	Edil3	ENSMUST00000118731	protein_coding		13	1	88821472	2721
ENSMUSG00000064037	protein_coding	Gpn1	ENSMUST00000201053	nonsense_mediated_decay		5	1	31494767	395
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000144482	protein_coding		8	-1	54690049	738
ENSMUSG00000031796	protein_coding	Cfap20	ENSMUST00000211908	protein_coding		8	-1	95434796	442
ENSMUSG00000039934	protein_coding	Gsap	ENSMUST00000197404	processed_transcript		5	1	21186299	1186
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000144484	nonsense_mediated_decay		9	-1	13827053	1255
ENSMUSG00000029198	protein_coding	Grpel1	ENSMUST00000031099	protein_coding	principal1	5	1	36464998	3528
ENSMUSG00000115008	processed_transcript	4933429O19Rik	ENSMUST00000227828	lincRNA		14	1	48878873	496
ENSMUSG00000064037	protein_coding	Gpn1	ENSMUST00000201942	retained_intron		5	1	31494794	643
ENSMUSG00000064037	protein_coding	Gpn1	ENSMUST00000200870	processed_transcript		5	1	31495001	373
ENSMUSG00000031796	protein_coding	Cfap20	ENSMUST00000212807	retained_intron		8	-1	95424838	361
ENSMUSG00000039934	protein_coding	Gsap	ENSMUST00000198071	nonsense_mediated_decay		5	1	21186312	1820
ENSMUSG00000006720	protein_coding	Zfp184	ENSMUST00000176511	protein_coding	principal1	13	1	21945094	2703
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000148086	protein_coding	principal1	9	-1	13827052	2467
ENSMUSG00000064037	protein_coding	Gpn1	ENSMUST00000202515	retained_intron		5	1	31507061	640
ENSMUSG00000031796	protein_coding	Cfap20	ENSMUST00000212131	nonsense_mediated_decay		8	-1	95425196	389
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000126316	processed_transcript		8	-1	54724350	855
ENSMUSG00000107142	antisense	4930566F21Rik	ENSMUST00000202605	antisense		5	-1	31487948	420
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000107537	protein_coding	alternative2	7	1	59228751	4911
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000124883	protein_coding		9	-1	13818686	1643
ENSMUSG00000006720	protein_coding	Zfp184	ENSMUST00000176580	nonsense_mediated_decay		13	1	21945112	2834
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000129132	protein_coding		8	-1	54724348	1043
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000150893	protein_coding		9	-1	13818665	1133
ENSMUSG00000039934	protein_coding	Gsap	ENSMUST00000195969	nonsense_mediated_decay		5	1	21186313	2014
ENSMUSG00000107142	antisense	4930566F21Rik	ENSMUST00000201177	antisense		5	-1	31495179	1535
ENSMUSG00000039934	protein_coding	Gsap	ENSMUST00000198937	protein_coding		5	1	21186313	2233
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000148806	processed_transcript		8	-1	54724474	759
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000124524	retained_intron		9	-1	13816397	417
ENSMUSG00000006720	protein_coding	Zfp184	ENSMUST00000102978	protein_coding	principal1	13	1	21945112	3198
ENSMUSG00000115008	processed_transcript	4933429O19Rik	ENSMUST00000228316	lincRNA		14	1	48878884	1618
ENSMUSG00000029138	protein_coding	4930548H24Rik	ENSMUST00000202441	retained_intron		5	1	31485740	2737
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000163530	protein_coding	alternative2	3	-1	95754871	2157
ENSMUSG00000006720	protein_coding	Zfp184	ENSMUST00000152258	protein_coding		13	1	21945137	628
ENSMUSG00000115008	processed_transcript	4933429O19Rik	ENSMUST00000227105	lincRNA		14	1	48878905	648
ENSMUSG00000039934	protein_coding	Gsap	ENSMUST00000196035	retained_intron		5	1	21251159	3297
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000148904	retained_intron		9	-1	13818945	869
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000176866	protein_coding		8	-1	54887150	342
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000148408	protein_coding		8	-1	54706981	764
ENSMUSG00000115599	TEC	Gm49154	ENSMUST00000227889	TEC		14	-1	48673899	1806
ENSMUSG00000034488	protein_coding	Edil3	ENSMUST00000153974	processed_transcript		13	1	88821488	2448
ENSMUSG00000039934	protein_coding	Gsap	ENSMUST00000198930	protein_coding		5	1	21289789	655
ENSMUSG00000039934	protein_coding	Gsap	ENSMUST00000199553	processed_transcript		5	1	21289869	401
ENSMUSG00000039375	protein_coding	Wdr17	ENSMUST00000176180	processed_transcript		8	-1	54887184	550
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000029752	protein_coding	principal3	3	-1	95754871	2400
ENSMUSG00000006720	protein_coding	Zfp184	ENSMUST00000176003	retained_intron		13	1	21949394	777
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000151878	protein_coding		9	-1	13818909	694
ENSMUSG00000115398	processed_transcript	Gm534	ENSMUST00000227492	lincRNA		14	-1	48881834	846
ENSMUSG00000105275	processed_pseudogene	Gm43214	ENSMUST00000199242	processed_pseudogene		5	-1	21279621	352
ENSMUSG00000006720	protein_coding	Zfp184	ENSMUST00000006903	protein_coding	principal1	13	1	21945793	2214
ENSMUSG00000026955	protein_coding	Sapcd2	ENSMUST00000114293	protein_coding	alternative2	2	1	25372330	1600
ENSMUSG00000105525	processed_pseudogene	Gm42976	ENSMUST00000200313	processed_pseudogene		5	-1	58149844	222
ENSMUSG00000104920	processed_pseudogene	Gm43215	ENSMUST00000199108	processed_pseudogene		5	1	21214009	252
ENSMUSG00000024858	protein_coding	Grk2	ENSMUST00000025791	protein_coding		19	-1	4305955	3182
ENSMUSG00000115398	processed_transcript	Gm534	ENSMUST00000226616	retained_intron		14	-1	48881869	1115
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000147115	protein_coding		9	-1	13826955	2262
ENSMUSG00000106146	TEC	Gm43045	ENSMUST00000198725	TEC		5	-1	58175528	2095
ENSMUSG00000026955	protein_coding	Sapcd2	ENSMUST00000100323	protein_coding	alternative2	2	1	25372334	1761
ENSMUSG00000108638	processed_pseudogene	Gm45150	ENSMUST00000206051	processed_pseudogene		7	-1	17686313	467
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000200376	processed_transcript		3	-1	95742146	577
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000165120	protein_coding		9	1	96196275	2341
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000131425	retained_intron		9	-1	13810414	649
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000229288	protein_coding		17	1	71768473	731
ENSMUSG00000105269	unprocessed_pseudogene	Gm42999	ENSMUST00000198049	unprocessed_pseudogene		5	1	58361633	786
ENSMUSG00000029138	protein_coding	4930548H24Rik	ENSMUST00000031020	protein_coding	principal1	5	1	31485859	1641
ENSMUSG00000035772	protein_coding	Mrps2	ENSMUST00000038600	protein_coding	principal1	2	1	28468066	2080
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000229328	retained_intron		17	1	71769691	2124
ENSMUSG00000105234	lincRNA	4930459L07Rik	ENSMUST00000199751	lincRNA		5	-1	58452999	420
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000230700	retained_intron		17	1	71769691	1200
ENSMUSG00000031922	protein_coding	Cep57	ENSMUST00000134746	nonsense_mediated_decay		9	-1	13827025	1756
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000098857	protein_coding		3	-1	95754883	3228
ENSMUSG00000026955	protein_coding	Sapcd2	ENSMUST00000155310	processed_transcript		2	1	25372360	932
ENSMUSG00000039899	protein_coding	Fgl2	ENSMUST00000035799	protein_coding	principal1	5	1	21372642	3788
ENSMUSG00000029701	protein_coding	Rbm28	ENSMUST00000007993	protein_coding	principal1	6	-1	29165006	4465
ENSMUSG00000026955	protein_coding	Sapcd2	ENSMUST00000129214	processed_transcript		2	1	25375960	753
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000197389	processed_transcript		3	-1	95748532	643
ENSMUSG00000098682	lincRNA	Otx2os1	ENSMUST00000228743	lincRNA		14	1	48668708	743
ENSMUSG00000024858	protein_coding	Grk2	ENSMUST00000113837	retained_intron		19	-1	4306030	3476
ENSMUSG00000035772	protein_coding	Mrps2	ENSMUST00000123533	processed_transcript		2	1	28468082	2429
ENSMUSG00000079022	protein_coding	Col22a1	ENSMUST00000229585	protein_coding		15	-1	71954399	6915
ENSMUSG00000100192	antisense	Gm29587	ENSMUST00000189898	antisense		12	-1	74235140	332
ENSMUSG00000098682	lincRNA	Otx2os1	ENSMUST00000228153	lincRNA		14	1	48668923	787
ENSMUSG00000026955	protein_coding	Sapcd2	ENSMUST00000137171	processed_transcript		2	1	25375021	535
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000201794	protein_coding		7	1	59228802	616
ENSMUSG00000098682	lincRNA	Otx2os1	ENSMUST00000227424	lincRNA		14	1	48668947	695
ENSMUSG00000026955	protein_coding	Sapcd2	ENSMUST00000132539	processed_transcript		2	1	25375774	791
ENSMUSG00000035772	protein_coding	Mrps2	ENSMUST00000146332	processed_transcript		2	1	28468090	2504
ENSMUSG00000026955	protein_coding	Sapcd2	ENSMUST00000028329	protein_coding	principal3	2	1	25372321	3121
ENSMUSG00000027068	protein_coding	Dhrs9	ENSMUST00000063690	protein_coding	principal1	2	1	69380445	4281
ENSMUSG00000108283	TEC	Gm44008	ENSMUST00000204345	TEC		6	1	54693646	412
ENSMUSG00000029701	protein_coding	Rbm28	ENSMUST00000169214	retained_intron		6	-1	29155091	1923
ENSMUSG00000029701	protein_coding	Rbm28	ENSMUST00000164563	protein_coding		6	-1	29131302	637
ENSMUSG00000024858	protein_coding	Grk2	ENSMUST00000088737	protein_coding	principal1	19	-1	4306222	3376
ENSMUSG00000029701	protein_coding	Rbm28	ENSMUST00000170750	retained_intron		6	-1	29152850	954
ENSMUSG00000007097	protein_coding	Atp1a2	ENSMUST00000085913	protein_coding	principal1	1	-1	172298064	6227
ENSMUSG00000024858	protein_coding	Grk2	ENSMUST00000235681	nonsense_mediated_decay		19	-1	4287849	853
ENSMUSG00000041515	protein_coding	Irf8	ENSMUST00000160943	protein_coding		8	1	120736358	1284
ENSMUSG00000063116	protein_coding	Olfr410	ENSMUST00000213831	protein_coding	principal1	11	-1	74337678	5070
ENSMUSG00000024858	protein_coding	Grk2	ENSMUST00000164427	retained_intron		19	-1	4289403	608
ENSMUSG00000063116	protein_coding	Olfr410	ENSMUST00000214490	protein_coding	principal1	11	-1	74338031	5075
ENSMUSG00000024858	protein_coding	Grk2	ENSMUST00000168594	protein_coding		19	-1	4289394	261
ENSMUSG00000046245	protein_coding	Pilra	ENSMUST00000058897	protein_coding	principal2	5	-1	137836268	2578
ENSMUSG00000034488	protein_coding	Edil3	ENSMUST00000081769	protein_coding	principal4	13	1	88821511	5317
ENSMUSG00000063116	protein_coding	Olfr410	ENSMUST00000052254	protein_coding	principal1	11	-1	74335229	948
ENSMUSG00000079022	protein_coding	Col22a1	ENSMUST00000159993	protein_coding	principal1	15	-1	72034227	8809
ENSMUSG00000024858	protein_coding	Grk2	ENSMUST00000165954	protein_coding		19	-1	4290483	624
ENSMUSG00000046245	protein_coding	Pilra	ENSMUST00000130460	retained_intron		5	-1	137831510	708
ENSMUSG00000046245	protein_coding	Pilra	ENSMUST00000110980	protein_coding	alternative2	5	-1	137836251	1371
ENSMUSG00000034488	protein_coding	Edil3	ENSMUST00000134241	retained_intron		13	1	88821557	1107
ENSMUSG00000098682	lincRNA	Otx2os1	ENSMUST00000183803	lincRNA		14	1	48669288	743
ENSMUSG00000024858	protein_coding	Grk2	ENSMUST00000169991	retained_intron		19	-1	4291811	557
ENSMUSG00000034488	protein_coding	Edil3	ENSMUST00000133761	processed_transcript		13	1	88821560	1998
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000195929	protein_coding		3	-1	95754871	623
ENSMUSG00000046245	protein_coding	Pilra	ENSMUST00000197586	protein_coding		5	-1	137836187	351
ENSMUSG00000098682	lincRNA	Otx2os1	ENSMUST00000183522	lincRNA		14	1	48670159	866
ENSMUSG00000024858	protein_coding	Grk2	ENSMUST00000167511	protein_coding		19	-1	4305208	403
ENSMUSG00000079022	protein_coding	Col22a1	ENSMUST00000160513	protein_coding		15	-1	71897616	659
ENSMUSG00000098682	lincRNA	Otx2os1	ENSMUST00000184869	lincRNA		14	1	48670262	438
ENSMUSG00000098682	lincRNA	Otx2os1	ENSMUST00000227221	lincRNA		14	1	48673666	751
ENSMUSG00000038065	protein_coding	Mturn	ENSMUST00000190641	protein_coding	principal1	6	1	54681624	5303
ENSMUSG00000034488	protein_coding	Edil3	ENSMUST00000137921	retained_intron		13	1	88821614	2828
ENSMUSG00000115130	TEC	Gm49152	ENSMUST00000226916	TEC		14	1	48814421	1309
ENSMUSG00000029701	protein_coding	Rbm28	ENSMUST00000170473	retained_intron		6	-1	29160156	844
ENSMUSG00000100422	lincRNA	Gm29226	ENSMUST00000186871	lincRNA		Y	1	34999098	2167
ENSMUSG00000115348	processed_pseudogene	Gm49155	ENSMUST00000226324	processed_pseudogene		14	-1	48867800	472
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000202440	protein_coding		7	1	59228802	729
ENSMUSG00000046245	protein_coding	Pilra	ENSMUST00000199028	protein_coding		5	-1	137836281	369
ENSMUSG00000034488	protein_coding	Edil3	ENSMUST00000140625	retained_intron		13	1	88821618	2677
ENSMUSG00000029701	protein_coding	Rbm28	ENSMUST00000172346	retained_intron		6	-1	29159931	495
ENSMUSG00000115380	processed_pseudogene	Gm46453	ENSMUST00000226725	processed_pseudogene		14	-1	48834534	367
ENSMUSG00000081327	processed_pseudogene	Gm11819	ENSMUST00000122192	processed_pseudogene		4	1	13444770	372
ENSMUSG00000100385	processed_pseudogene	Gm29227	ENSMUST00000187139	processed_pseudogene		Y	1	35003853	315
ENSMUSG00000067058	processed_pseudogene	Rps15a-ps5	ENSMUST00000132586	processed_pseudogene		5	-1	105797713	393
ENSMUSG00000038065	protein_coding	Mturn	ENSMUST00000187701	protein_coding		6	1	54681754	503
ENSMUSG00000101713	lincRNA	Gm28668	ENSMUST00000186549	lincRNA		Y	1	71407250	1499
ENSMUSG00000034488	protein_coding	Edil3	ENSMUST00000043111	protein_coding	alternative1	13	1	88821642	5156
ENSMUSG00000053980	TEC	Gm9930	ENSMUST00000066742	TEC		10	-1	9535681	3151
ENSMUSG00000038065	protein_coding	Mturn	ENSMUST00000185518	retained_intron		6	1	54681802	645
ENSMUSG00000084878	antisense	Lrrc8dos	ENSMUST00000135958	antisense		5	-1	105818988	586
ENSMUSG00000101713	lincRNA	Gm28668	ENSMUST00000185428	lincRNA		Y	1	71407703	434
ENSMUSG00000111951	TEC	Gm48755	ENSMUST00000220217	TEC		10	-1	9547521	1276
ENSMUSG00000101651	antisense	Gm28402	ENSMUST00000188574	antisense		6	-1	54681917	373
ENSMUSG00000079022	protein_coding	Col22a1	ENSMUST00000162081	processed_transcript		15	-1	71954374	1210
ENSMUSG00000020520	protein_coding	Galnt10	ENSMUST00000066987	protein_coding	principal1	11	1	57645442	4715
ENSMUSG00000083328	processed_pseudogene	Gm11826	ENSMUST00000118781	processed_pseudogene		4	-1	13483192	438
ENSMUSG00000044912	protein_coding	Syt16	ENSMUST00000221220	protein_coding	principal2	12	1	73997661	8156
ENSMUSG00000072599	unprocessed_pseudogene	Ear-ps2	ENSMUST00000100689	unprocessed_pseudogene		14	1	44046985	466
ENSMUSG00000112700	lincRNA	Gm48757	ENSMUST00000218493	lincRNA		10	1	9566376	491
ENSMUSG00000082588	processed_pseudogene	Gm15443	ENSMUST00000118947	processed_pseudogene		1	-1	149026047	820
ENSMUSG00000091411	protein_coding	Gm5916	ENSMUST00000168452	protein_coding	principal1	9	-1	36128779	1142
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000198289	protein_coding		3	-1	95754838	946
ENSMUSG00000081063	processed_pseudogene	Gm11825	ENSMUST00000120710	processed_pseudogene		4	1	13606034	736
ENSMUSG00000099531	protein_coding	Gm20869	ENSMUST00000188958	protein_coding	principal1	Y	1	71469449	924
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000199570	protein_coding		3	-1	95754871	661
ENSMUSG00000090180	unprocessed_pseudogene	Ang-ps1	ENSMUST00000162314	unprocessed_pseudogene		14	-1	44057418	436
ENSMUSG00000100008	processed_pseudogene	Gm28481	ENSMUST00000189231	processed_pseudogene		Y	-1	71593223	315
ENSMUSG00000100064	unprocessed_pseudogene	Gm28339	ENSMUST00000185845	unprocessed_pseudogene		Y	1	35040387	696
ENSMUSG00000020520	protein_coding	Galnt10	ENSMUST00000108846	protein_coding		11	1	57645465	1745
ENSMUSG00000044912	protein_coding	Syt16	ENSMUST00000110451	nonsense_mediated_decay		12	1	73997761	3476
ENSMUSG00000090259	unprocessed_pseudogene	Gm16545	ENSMUST00000161968	unprocessed_pseudogene		14	1	44074561	463
ENSMUSG00000020448	protein_coding	Rnf185	ENSMUST00000077078	protein_coding	principal1	11	-1	3452363	2787
ENSMUSG00000115488	lincRNA	Gm49099	ENSMUST00000228110	lincRNA		14	-1	44075921	989
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000198007	processed_transcript		3	-1	95754355	636
ENSMUSG00000115488	lincRNA	Gm49099	ENSMUST00000227832	lincRNA		14	-1	44074886	368
ENSMUSG00000086933	antisense	4933426K07Rik	ENSMUST00000143009	antisense		11	-1	57657826	1548
ENSMUSG00000044912	protein_coding	Syt16	ENSMUST00000221973	processed_transcript		12	1	73997777	436
ENSMUSG00000044912	protein_coding	Syt16	ENSMUST00000221073	processed_transcript		12	1	73997799	330
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000196868	protein_coding		3	-1	95754849	689
ENSMUSG00000100537	lincRNA	Gm28485	ENSMUST00000185300	lincRNA		Y	1	71629963	1500
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000197895	retained_intron		3	-1	95750952	457
ENSMUSG00000064280	protein_coding	Ccdc146	ENSMUST00000115245	protein_coding	principal2	5	-1	21424677	3389
ENSMUSG00000044912	protein_coding	Syt16	ENSMUST00000238790	protein_coding	alternative2	12	1	74162217	3043
ENSMUSG00000100537	lincRNA	Gm28485	ENSMUST00000187125	lincRNA		Y	1	71630418	437
ENSMUSG00000040726	protein_coding	Hesx1	ENSMUST00000224331	protein_coding	principal1	14	1	26994416	983
ENSMUSG00000014498	protein_coding	Ankrd52	ENSMUST00000167990	retained_intron		10	1	128377115	3324
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000196475	processed_transcript		3	-1	95754817	787
ENSMUSG00000007097	protein_coding	Atp1a2	ENSMUST00000131751	retained_intron		1	-1	172298064	3583
ENSMUSG00000101134	lincRNA	Gm28482	ENSMUST00000189350	lincRNA		Y	-1	71636635	452
ENSMUSG00000007097	protein_coding	Atp1a2	ENSMUST00000191781	retained_intron		1	-1	172276478	450
ENSMUSG00000041515	protein_coding	Irf8	ENSMUST00000047737	protein_coding	principal1	8	1	120736358	2847
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000198194	retained_intron		3	-1	95754472	714
ENSMUSG00000064280	protein_coding	Ccdc146	ENSMUST00000030552	protein_coding	alternative2	5	-1	21424677	1336
ENSMUSG00000007097	protein_coding	Atp1a2	ENSMUST00000097464	protein_coding		1	-1	172298064	3186
ENSMUSG00000100557	lincRNA	1700029E06Rik	ENSMUST00000189036	lincRNA		5	1	58453039	757
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000200758	protein_coding	principal3	7	1	59228802	9856
ENSMUSG00000007097	protein_coding	Atp1a2	ENSMUST00000137679	retained_intron		1	-1	172298064	2190
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000197720	nonsense_mediated_decay		3	-1	95754849	732
ENSMUSG00000028454	protein_coding	Pigo	ENSMUST00000149333	protein_coding		4	-1	43025080	2312
ENSMUSG00000028107	protein_coding	Tars2	ENSMUST00000197501	protein_coding		3	-1	95760206	625
ENSMUSG00000040413	protein_coding	Timd2	ENSMUST00000109225	protein_coding	principal1	11	-1	46698962	2236
ENSMUSG00000020448	protein_coding	Rnf185	ENSMUST00000064364	protein_coding		11	-1	3452363	2906
ENSMUSG00000064280	protein_coding	Ccdc146	ENSMUST00000123796	retained_intron		5	-1	21330905	780
ENSMUSG00000104967	processed_pseudogene	Gm43436	ENSMUST00000199308	processed_pseudogene		3	1	95780724	147
ENSMUSG00000072596	protein_coding	Ear2	ENSMUST00000074839	protein_coding	principal1	14	1	44102654	719
ENSMUSG00000064280	protein_coding	Ccdc146	ENSMUST00000129172	retained_intron		5	-1	21322746	760
ENSMUSG00000105093	processed_pseudogene	Gm17815	ENSMUST00000198305	processed_pseudogene		3	1	95804855	895
ENSMUSG00000019878	protein_coding	Hsf2	ENSMUST00000220353	nonsense_mediated_decay		10	1	57486385	2695
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000202207	retained_intron		7	1	59228822	3586
ENSMUSG00000040413	protein_coding	Timd2	ENSMUST00000055102	protein_coding	principal1	11	-1	46707059	1941
ENSMUSG00000115794	lincRNA	Gm49101	ENSMUST00000226587	lincRNA		14	-1	44103915	1067
ENSMUSG00000040413	protein_coding	Timd2	ENSMUST00000125008	protein_coding		11	-1	46707061	479
ENSMUSG00000040726	protein_coding	Hesx1	ENSMUST00000035433	protein_coding	principal1	14	1	27000362	1141
ENSMUSG00000117556	processed_pseudogene	Gm18948	ENSMUST00000234527	processed_pseudogene		18	1	7548987	595
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000200781	processed_transcript		7	1	59229177	742
ENSMUSG00000041515	protein_coding	Irf8	ENSMUST00000162775	retained_intron		8	1	120736359	3469
ENSMUSG00000100917	processed_pseudogene	Gm18751	ENSMUST00000185777	processed_pseudogene		1	1	149037584	2013
ENSMUSG00000094334	processed_pseudogene	Fabp5l2	ENSMUST00000072582	processed_pseudogene		18	1	7581516	405
ENSMUSG00000033615	protein_coding	Cplx1	ENSMUST00000046892	protein_coding	principal1	5	-1	108550024	2189
ENSMUSG00000064280	protein_coding	Ccdc146	ENSMUST00000132473	processed_transcript		5	-1	21331119	646
ENSMUSG00000020448	protein_coding	Rnf185	ENSMUST00000144055	processed_transcript		11	-1	3452334	643
ENSMUSG00000041515	protein_coding	Irf8	ENSMUST00000162658	protein_coding		8	1	120736385	480
ENSMUSG00000037346	protein_coding	Hrh4	ENSMUST00000041676	protein_coding	principal1	18	1	13006990	1537
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000201480	processed_transcript		7	1	59229225	549
ENSMUSG00000041515	protein_coding	Irf8	ENSMUST00000162001	protein_coding	principal1	8	1	120738639	2270
ENSMUSG00000099686	processed_pseudogene	Gm29460	ENSMUST00000188607	processed_pseudogene		1	1	98764841	714
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000201409	protein_coding		7	1	59229283	1119
ENSMUSG00000040413	protein_coding	Timd2	ENSMUST00000169584	protein_coding	principal1	11	-1	46690357	2926
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000207686	protein_coding		7	1	59229433	797
ENSMUSG00000110173	processed_pseudogene	Gm6929	ENSMUST00000210930	processed_pseudogene		7	-1	11845720	468
ENSMUSG00000037346	protein_coding	Hrh4	ENSMUST00000234084	protein_coding		18	1	13006991	1308
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000208313	protein_coding		7	1	59229436	441
ENSMUSG00000047655	protein_coding	Vmn1r74	ENSMUST00000228471	protein_coding	principal1	7	1	11833980	6608
ENSMUSG00000033615	protein_coding	Cplx1	ENSMUST00000129040	protein_coding		5	-1	108550000	434
ENSMUSG00000020390	protein_coding	Ube2b	ENSMUST00000020657	protein_coding	principal1	11	-1	52000484	1792
ENSMUSG00000037346	protein_coding	Hrh4	ENSMUST00000234565	protein_coding		18	1	13007037	520
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000200709	protein_coding		7	1	59242908	664
ENSMUSG00000041515	protein_coding	Irf8	ENSMUST00000160388	retained_intron		8	1	120745480	764
ENSMUSG00000047655	protein_coding	Vmn1r74	ENSMUST00000050416	protein_coding	principal1	7	1	11846775	915
ENSMUSG00000090429	processed_pseudogene	Gm17271	ENSMUST00000165535	processed_pseudogene		15	1	76797696	355
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000200949	retained_intron		7	1	59276935	4254
ENSMUSG00000117447	processed_pseudogene	Gm5240	ENSMUST00000234509	processed_pseudogene		18	-1	13131561	887
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000202776	retained_intron		7	1	59282415	3348
ENSMUSG00000112729	processed_pseudogene	Gm46231	ENSMUST00000220152	processed_pseudogene		10	-1	69566361	314
ENSMUSG00000117583	processed_pseudogene	Gm18083	ENSMUST00000234898	processed_pseudogene		18	-1	13152805	754
ENSMUSG00000111899	processed_pseudogene	Gm18636	ENSMUST00000218846	processed_pseudogene		10	-1	69423748	1066
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000202247	protein_coding		7	1	59286178	579
ENSMUSG00000041515	protein_coding	Irf8	ENSMUST00000160594	processed_transcript		8	1	120752209	596
ENSMUSG00000045471	protein_coding	Hcrt	ENSMUST00000107360	protein_coding		11	-1	100762928	509
ENSMUSG00000020390	protein_coding	Ube2b	ENSMUST00000109086	protein_coding	principal1	11	-1	52000762	585
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000202288	protein_coding		7	1	59286942	442
ENSMUSG00000028948	protein_coding	Nol9	ENSMUST00000103197	protein_coding	principal3	4	1	152039336	2271
ENSMUSG00000020390	protein_coding	Ube2b	ENSMUST00000124699	processed_transcript		11	-1	52000479	516
ENSMUSG00000117536	lincRNA	Gm41669	ENSMUST00000234045	lincRNA		18	-1	13306338	1226
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000201162	processed_transcript		7	1	59300042	2129
ENSMUSG00000112490	processed_pseudogene	Gm48068	ENSMUST00000217881	processed_pseudogene		10	1	14586936	567
ENSMUSG00000117367	processed_pseudogene	Gm50093	ENSMUST00000235001	processed_pseudogene		18	1	13372089	464
ENSMUSG00000020390	protein_coding	Ube2b	ENSMUST00000147833	processed_transcript		11	-1	52000762	408
ENSMUSG00000028454	protein_coding	Pigo	ENSMUST00000098109	protein_coding	principal3	4	-1	43025756	4239
ENSMUSG00000025326	protein_coding	Ube3a	ENSMUST00000202685	retained_intron		7	1	59303511	436
ENSMUSG00000082895	processed_pseudogene	Rpsa-ps9	ENSMUST00000120702	processed_pseudogene		2	1	28477166	885
ENSMUSG00000109362	TEC	Gm44562	ENSMUST00000207194	TEC		7	-1	59260201	1347
ENSMUSG00000109157	TEC	Gm44829	ENSMUST00000208008	TEC		7	1	59318631	3193
ENSMUSG00000028948	protein_coding	Nol9	ENSMUST00000131696	nonsense_mediated_decay		4	1	152039363	3616
ENSMUSG00000081485	processed_pseudogene	Gm12338	ENSMUST00000122170	processed_pseudogene		11	-1	75599954	192
ENSMUSG00000109575	TEC	Gm44831	ENSMUST00000208469	TEC		7	-1	59630676	2989
ENSMUSG00000108886	TEC	Gm44830	ENSMUST00000207667	TEC		7	1	59292518	584
ENSMUSG00000034677	protein_coding	Gpr142	ENSMUST00000045319	protein_coding	principal3	11	1	114798924	1098
ENSMUSG00000085088	processed_transcript	4931413K12Rik	ENSMUST00000142068	processed_transcript		11	-1	75594771	1282
ENSMUSG00000045471	protein_coding	Hcrt	ENSMUST00000055083	protein_coding	principal1	11	-1	100762931	586
ENSMUSG00000028454	protein_coding	Pigo	ENSMUST00000067481	protein_coding	alternative2	4	-1	43025819	3525
ENSMUSG00000028948	protein_coding	Nol9	ENSMUST00000084116	protein_coding	alternative2	4	1	152039327	3722
ENSMUSG00000085416	antisense	1700019G24Rik	ENSMUST00000130004	antisense		6	-1	5977393	503
ENSMUSG00000034677	protein_coding	Gpr142	ENSMUST00000106584	protein_coding	alternative2	11	1	114798924	1116
ENSMUSG00000021303	protein_coding	Gng4	ENSMUST00000138783	processed_transcript		13	1	13784059	206
ENSMUSG00000028454	protein_coding	Pigo	ENSMUST00000155429	processed_transcript		4	-1	43019706	491
ENSMUSG00000099453	processed_pseudogene	Gm18248	ENSMUST00000191164	processed_pseudogene		1	-1	99640241	1846
ENSMUSG00000070334	protein_coding	Krtap31-1	ENSMUST00000093935	protein_coding	principal1	11	1	99907920	973
ENSMUSG00000028454	protein_coding	Pigo	ENSMUST00000131506	processed_transcript		4	-1	43025467	554
ENSMUSG00000102074	lincRNA	Gm29020	ENSMUST00000191166	lincRNA		1	1	149106115	290
ENSMUSG00000086554	antisense	9530034E10Rik	ENSMUST00000146982	antisense		4	1	117975036	502
ENSMUSG00000115056	unprocessed_pseudogene	Gm49103	ENSMUST00000228592	unprocessed_pseudogene		14	-1	44116777	202
ENSMUSG00000115235	transcribed_unprocessed_pseudogene	Gm49102	ENSMUST00000228520	processed_transcript		14	1	44113360	2684
ENSMUSG00000019878	protein_coding	Hsf2	ENSMUST00000079833	protein_coding	principal1	10	1	57486396	2604
ENSMUSG00000115235	transcribed_unprocessed_pseudogene	Gm49102	ENSMUST00000227035	transcribed_unprocessed_pseudogene		14	1	44113372	333
ENSMUSG00000078256	protein_coding	Gm11565	ENSMUST00000105053	protein_coding	principal1	11	1	99914751	921
ENSMUSG00000063632	protein_coding	Sox11	ENSMUST00000079063	protein_coding	principal1	12	-1	27342574	8311
ENSMUSG00000101457	processed_pseudogene	Gm18701	ENSMUST00000188281	processed_pseudogene		1	1	149173060	1536
ENSMUSG00000019878	protein_coding	Hsf2	ENSMUST00000220042	protein_coding		10	1	57486425	2430
ENSMUSG00000115713	unprocessed_pseudogene	Gm18216	ENSMUST00000226712	unprocessed_pseudogene		14	-1	44121253	317
ENSMUSG00000021303	protein_coding	Gng4	ENSMUST00000021734	protein_coding	principal1	13	1	13784329	3179
ENSMUSG00000019878	protein_coding	Hsf2	ENSMUST00000219171	retained_intron		10	1	57495976	844
ENSMUSG00000019878	protein_coding	Hsf2	ENSMUST00000218251	retained_intron		10	1	57500374	4527
ENSMUSG00000086688	processed_pseudogene	Gm11560	ENSMUST00000117567	processed_pseudogene		11	1	99932162	948
ENSMUSG00000078672	protein_coding	Mup20	ENSMUST00000074018	protein_coding	principal1	4	-1	62054158	928
ENSMUSG00000021303	protein_coding	Gng4	ENSMUST00000220727	processed_transcript		13	1	13819279	324
ENSMUSG00000046079	protein_coding	Lrrc8d	ENSMUST00000060531	protein_coding	principal1	5	1	105699969	3923
ENSMUSG00000102314	TEC	Gm37630	ENSMUST00000194210	TEC		1	-1	149409945	1456
ENSMUSG00000019878	protein_coding	Hsf2	ENSMUST00000220162	retained_intron		10	1	57510188	2304
ENSMUSG00000117608	lincRNA	AC103362.1	ENSMUST00000234018	lincRNA		18	-1	13601400	1577
ENSMUSG00000117608	lincRNA	AC103362.1	ENSMUST00000234112	lincRNA		18	-1	13601400	1273
ENSMUSG00000071646	protein_coding	Mta2	ENSMUST00000096240	protein_coding	principal1	19	1	8941875	3135
ENSMUSG00000099325	processed_pseudogene	Gm19014	ENSMUST00000184828	processed_pseudogene		14	-1	26080296	1189
ENSMUSG00000113421	lincRNA	Gm4166	ENSMUST00000220893	lincRNA		12	1	27598201	2996
ENSMUSG00000028098	protein_coding	Rnf115	ENSMUST00000029740	protein_coding	principal1	3	1	96727664	2209
ENSMUSG00000086493	antisense	Gm12204	ENSMUST00000147412	antisense		11	1	52000853	333
ENSMUSG00000102309	TEC	Gm38189	ENSMUST00000194495	TEC		1	-1	149412179	1457
ENSMUSG00000113616	lincRNA	Gm45941	ENSMUST00000221907	lincRNA		12	1	27946042	675
ENSMUSG00000046079	protein_coding	Lrrc8d	ENSMUST00000120847	protein_coding	principal1	5	1	105700789	3929
ENSMUSG00000113616	lincRNA	Gm45941	ENSMUST00000223144	lincRNA		12	1	27980597	389
ENSMUSG00000051481	protein_coding	Krtap31-2	ENSMUST00000058761	protein_coding	principal1	11	1	99936291	935
ENSMUSG00000100535	protein_coding	Gm20870	ENSMUST00000189315	protein_coding	principal1	Y	1	71692043	922
ENSMUSG00000090594	protein_coding	Gm3327	ENSMUST00000168906	protein_coding	principal1	14	1	44123851	1389
ENSMUSG00000047517	protein_coding	Dmbt1	ENSMUST00000084509	protein_coding	principal3	7	1	131032046	6273
ENSMUSG00000050677	protein_coding	Ccdc96	ENSMUST00000060100	protein_coding	principal1	5	1	36484588	3585
ENSMUSG00000028098	protein_coding	Rnf115	ENSMUST00000199051	nonsense_mediated_decay		3	1	96727672	2742
ENSMUSG00000046079	protein_coding	Lrrc8d	ENSMUST00000140608	retained_intron		5	1	105700810	2287
ENSMUSG00000046079	protein_coding	Lrrc8d	ENSMUST00000135776	processed_transcript		5	1	105700866	5736
ENSMUSG00000078255	protein_coding	Krtap9-5	ENSMUST00000105052	protein_coding	principal1	11	1	99948475	1077
ENSMUSG00000046079	protein_coding	Lrrc8d	ENSMUST00000156630	protein_coding		5	1	105731389	366
ENSMUSG00000028098	protein_coding	Rnf115	ENSMUST00000199974	processed_transcript		3	1	96727839	616
ENSMUSG00000046079	protein_coding	Lrrc8d	ENSMUST00000127686	protein_coding		5	1	105731784	498
ENSMUSG00000047517	protein_coding	Dmbt1	ENSMUST00000213064	protein_coding	alternative2	7	1	131032053	5777
ENSMUSG00000046079	protein_coding	Lrrc8d	ENSMUST00000149831	processed_transcript		5	1	105731990	500
ENSMUSG00000047517	protein_coding	Dmbt1	ENSMUST00000208860	retained_intron		7	1	131032069	763
ENSMUSG00000047517	protein_coding	Dmbt1	ENSMUST00000208311	protein_coding	alternative2	7	1	131032069	6283
ENSMUSG00000046079	protein_coding	Lrrc8d	ENSMUST00000154807	protein_coding		5	1	105732063	593
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000218194	processed_transcript		10	1	69398773	1082
ENSMUSG00000071646	protein_coding	Mta2	ENSMUST00000137956	processed_transcript		19	1	8942493	620
ENSMUSG00000036110	protein_coding	Slc17a2	ENSMUST00000141717	retained_intron		13	1	23806993	3269
ENSMUSG00000046079	protein_coding	Lrrc8d	ENSMUST00000140081	processed_transcript		5	1	105732230	492
ENSMUSG00000047517	protein_coding	Dmbt1	ENSMUST00000209015	protein_coding		7	1	131108462	1868
ENSMUSG00000047517	protein_coding	Dmbt1	ENSMUST00000209167	processed_transcript		7	1	131119000	855
ENSMUSG00000099422	transcribed_unitary_pseudogene	Gm4275	ENSMUST00000210214	processed_transcript		7	1	130523470	1298
ENSMUSG00000099422	transcribed_unitary_pseudogene	Gm4275	ENSMUST00000209209	processed_transcript		7	1	130523735	1194
ENSMUSG00000099422	transcribed_unitary_pseudogene	Gm4275	ENSMUST00000210838	processed_transcript		7	1	130525519	1305
ENSMUSG00000000739	protein_coding	Sult5a1	ENSMUST00000000755	protein_coding	principal1	8	-1	123158270	3805
ENSMUSG00000099422	transcribed_unitary_pseudogene	Gm4275	ENSMUST00000212624	transcribed_unitary_pseudogene		7	1	130525519	1436
ENSMUSG00000071646	protein_coding	Mta2	ENSMUST00000135300	processed_transcript		19	1	8942506	756
ENSMUSG00000028364	protein_coding	Tnc	ENSMUST00000030056	protein_coding	principal2	4	-1	64020725	6833
ENSMUSG00000046079	protein_coding	Lrrc8d	ENSMUST00000134605	processed_transcript		5	1	105824511	2979
ENSMUSG00000099422	transcribed_unitary_pseudogene	Gm4275	ENSMUST00000190198	processed_transcript		7	1	130525927	1013
ENSMUSG00000055061	antisense	4931431C16Rik	ENSMUST00000124643	antisense		5	-1	35588763	2735
ENSMUSG00000000739	protein_coding	Sult5a1	ENSMUST00000122819	nonsense_mediated_decay		8	-1	123158270	1053
ENSMUSG00000017747	protein_coding	Ghdc	ENSMUST00000017891	protein_coding	principal1	11	-1	100770957	2462
ENSMUSG00000109270	antisense	Gm10584	ENSMUST00000207036	antisense		7	1	132315664	2628
ENSMUSG00000109087	processed_pseudogene	Gm45105	ENSMUST00000207824	processed_pseudogene		7	-1	131493903	397
ENSMUSG00000071646	protein_coding	Mta2	ENSMUST00000132463	retained_intron		19	1	8944034	839
ENSMUSG00000054406	protein_coding	Olfr411	ENSMUST00000214769	protein_coding	principal1	11	-1	74352650	2545
ENSMUSG00000071646	protein_coding	Mta2	ENSMUST00000169535	processed_transcript		19	1	8945095	657
ENSMUSG00000028364	protein_coding	Tnc	ENSMUST00000107372	protein_coding	alternative2	4	-1	64020725	7106
ENSMUSG00000000739	protein_coding	Sult5a1	ENSMUST00000137998	protein_coding		8	-1	123158257	748
ENSMUSG00000017747	protein_coding	Ghdc	ENSMUST00000147682	processed_transcript		11	-1	100768713	905
ENSMUSG00000071646	protein_coding	Mta2	ENSMUST00000151386	retained_intron		19	1	8946400	814
ENSMUSG00000028364	protein_coding	Tnc	ENSMUST00000107371	protein_coding		4	-1	64020725	2928
ENSMUSG00000040105	protein_coding	Plpp6	ENSMUST00000045674	protein_coding	principal1	19	1	28963953	2859
ENSMUSG00000054406	protein_coding	Olfr411	ENSMUST00000080365	protein_coding	principal1	11	-1	74347672	1049
ENSMUSG00000021468	protein_coding	Sptlc1	ENSMUST00000021920	protein_coding	principal1	13	-1	53377397	2606
ENSMUSG00000028364	protein_coding	Tnc	ENSMUST00000107377	protein_coding	principal2	4	-1	64047015	7100
ENSMUSG00000094817	protein_coding	Cphx3	ENSMUST00000184577	protein_coding	principal1	14	1	26221856	1714
ENSMUSG00000000739	protein_coding	Sult5a1	ENSMUST00000146007	nonsense_mediated_decay		8	-1	123158228	674
ENSMUSG00000017747	protein_coding	Ghdc	ENSMUST00000139341	protein_coding		11	-1	100770942	455
ENSMUSG00000089993	processed_pseudogene	Gm5822	ENSMUST00000161562	processed_pseudogene		19	-1	28863707	1378
ENSMUSG00000014498	protein_coding	Ankrd52	ENSMUST00000014642	protein_coding	principal1	10	1	128377119	6620
ENSMUSG00000054406	protein_coding	Olfr411	ENSMUST00000141134	protein_coding		11	-1	74352621	420
ENSMUSG00000086755	lincRNA	Gm11216	ENSMUST00000125240	lincRNA		4	1	64075533	354
ENSMUSG00000021468	protein_coding	Sptlc1	ENSMUST00000221265	processed_transcript		13	-1	53377348	612
ENSMUSG00000094817	protein_coding	Cphx3	ENSMUST00000184670	retained_intron		14	1	26231172	570
ENSMUSG00000024935	protein_coding	Slc1a1	ENSMUST00000161340	retained_intron		19	1	28835049	573
ENSMUSG00000021468	protein_coding	Sptlc1	ENSMUST00000221709	retained_intron		13	-1	53377365	670
ENSMUSG00000094817	protein_coding	Cphx3	ENSMUST00000163305	protein_coding	principal1	14	1	26082297	1653
ENSMUSG00000113043	processed_pseudogene	Gm7753	ENSMUST00000221007	processed_pseudogene		12	-1	61890604	867
ENSMUSG00000000739	protein_coding	Sult5a1	ENSMUST00000126951	retained_intron		8	-1	123158274	674
ENSMUSG00000014498	protein_coding	Ankrd52	ENSMUST00000166577	protein_coding		10	1	128389290	670
ENSMUSG00000000739	protein_coding	Sult5a1	ENSMUST00000152722	retained_intron		8	-1	123158315	460
ENSMUSG00000113725	TEC	Gm48358	ENSMUST00000221538	TEC		12	-1	61991769	1468
ENSMUSG00000113144	processed_pseudogene	Gm2754	ENSMUST00000223383	processed_pseudogene		12	-1	62065627	589
ENSMUSG00000113171	processed_pseudogene	Gm48359	ENSMUST00000223464	processed_pseudogene		12	1	62065564	134
ENSMUSG00000039109	protein_coding	F13a1	ENSMUST00000037491	protein_coding	principal1	13	-1	37049288	3952
ENSMUSG00000039109	protein_coding	F13a1	ENSMUST00000164727	protein_coding	principal1	13	-1	37050244	3854
ENSMUSG00000024308	protein_coding	Tapbp	ENSMUST00000172619	protein_coding		17	1	33915899	413
ENSMUSG00000024308	protein_coding	Tapbp	ENSMUST00000234582	protein_coding		17	1	33916186	301
ENSMUSG00000043153	protein_coding	Crppa	ENSMUST00000221452	protein_coding	alternative2	12	1	36381450	1924
ENSMUSG00000043857	protein_coding	Mgat5b	ENSMUST00000103027	protein_coding	principal1	11	1	116918863	4258
ENSMUSG00000031976	protein_coding	Urb2	ENSMUST00000173168	nonsense_mediated_decay		8	1	124021508	6073
ENSMUSG00000108075	TEC	Gm45061	ENSMUST00000204395	TEC		6	1	58973197	2095
ENSMUSG00000043153	protein_coding	Crppa	ENSMUST00000062041	protein_coding	principal2	12	1	36381519	2690
ENSMUSG00000021867	protein_coding	Tmem254b	ENSMUST00000022418	protein_coding	principal1	14	-1	26207041	1447
ENSMUSG00000092323	antisense	BB365896	ENSMUST00000173978	antisense		6	1	58965655	3000
ENSMUSG00000043857	protein_coding	Mgat5b	ENSMUST00000139905	processed_transcript		11	1	116947335	725
ENSMUSG00000043857	protein_coding	Mgat5b	ENSMUST00000136584	protein_coding		11	1	116966796	641
ENSMUSG00000066364	protein_coding	Serpina3b	ENSMUST00000085052	protein_coding	principal1	12	1	104127996	2070
ENSMUSG00000043153	protein_coding	Crppa	ENSMUST00000220519	protein_coding		12	1	36381554	3122
ENSMUSG00000026712	protein_coding	Mrc1	ENSMUST00000028045	protein_coding	principal1	2	1	14229392	5374
ENSMUSG00000021867	protein_coding	Tmem254b	ENSMUST00000100806	protein_coding		14	-1	26206619	1108
ENSMUSG00000043857	protein_coding	Mgat5b	ENSMUST00000126757	retained_intron		11	1	116973073	2568
ENSMUSG00000098037	processed_pseudogene	Gm7765	ENSMUST00000182585	processed_pseudogene		16	-1	16366157	974
ENSMUSG00000043153	protein_coding	Crppa	ENSMUST00000221895	protein_coding		12	1	36381583	4022
ENSMUSG00000099148	lincRNA	Gm3331	ENSMUST00000183423	lincRNA		9	1	32813734	1017
ENSMUSG00000043153	protein_coding	Crppa	ENSMUST00000223205	protein_coding	alternative2	12	1	36381757	2361
ENSMUSG00000102467	TEC	Gm37167	ENSMUST00000194946	TEC		9	-1	32839922	396
ENSMUSG00000021867	protein_coding	Tmem254b	ENSMUST00000183976	nonsense_mediated_decay		14	-1	26207012	776
ENSMUSG00000026712	protein_coding	Mrc1	ENSMUST00000146168	retained_intron		2	1	14328561	2069
ENSMUSG00000058275	protein_coding	Olfr412	ENSMUST00000216362	protein_coding	principal1	11	1	74362069	1786
ENSMUSG00000081812	processed_pseudogene	Gm4789	ENSMUST00000121708	processed_pseudogene		X	-1	23856034	1216
ENSMUSG00000021867	protein_coding	Tmem254b	ENSMUST00000184797	retained_intron		14	-1	26205157	418
ENSMUSG00000043153	protein_coding	Crppa	ENSMUST00000223068	protein_coding		12	1	36382147	2808
ENSMUSG00000058275	protein_coding	Olfr412	ENSMUST00000077794	protein_coding	principal1	11	1	74364671	939
ENSMUSG00000039109	protein_coding	F13a1	ENSMUST00000224783	processed_transcript		13	-1	37049187	1509
ENSMUSG00000043153	protein_coding	Crppa	ENSMUST00000221177	protein_coding		12	1	36382180	1456
ENSMUSG00000098524	processed_pseudogene	Gm19015	ENSMUST00000184002	processed_pseudogene		14	-1	26219910	1189
ENSMUSG00000068113	protein_coding	Gm4907	ENSMUST00000116614	protein_coding	principal1	X	1	23882553	1493
ENSMUSG00000116192	processed_pseudogene	Gm18869	ENSMUST00000230562	processed_pseudogene		16	1	16379212	997
ENSMUSG00000091007	lincRNA	D630036H23Rik	ENSMUST00000171007	lincRNA		12	-1	36382181	940
ENSMUSG00000118629	processed_pseudogene	CT573014.1	ENSMUST00000239385	processed_pseudogene		16	1	16382659	214
ENSMUSG00000039109	protein_coding	F13a1	ENSMUST00000225168	processed_transcript		13	-1	37049213	1110
ENSMUSG00000072675	protein_coding	Duxbl2	ENSMUST00000174012	processed_transcript		14	1	26118349	365
ENSMUSG00000114135	processed_pseudogene	Gm7252	ENSMUST00000223284	processed_pseudogene		12	1	36539357	456
ENSMUSG00000031976	protein_coding	Urb2	ENSMUST00000034457	protein_coding	principal1	8	1	124023394	5853
ENSMUSG00000068113	protein_coding	Gm4907	ENSMUST00000163718	protein_coding	principal1	X	1	23892784	1236
ENSMUSG00000039109	protein_coding	F13a1	ENSMUST00000224446	processed_transcript		13	-1	37049213	2965
ENSMUSG00000039878	protein_coding	Slc39a5	ENSMUST00000042666	protein_coding	principal1	10	-1	128401229	1947
ENSMUSG00000012848	protein_coding	Rps5	ENSMUST00000108539	protein_coding	principal1	7	1	12922290	794
ENSMUSG00000114329	antisense	Gm30489	ENSMUST00000224527	antisense		13	1	36963239	1746
ENSMUSG00000020069	protein_coding	Hnrnph3	ENSMUST00000020263	protein_coding	principal3	10	-1	63023894	2213
ENSMUSG00000114884	lincRNA	Gm47675	ENSMUST00000224473	lincRNA		13	-1	36864625	333
ENSMUSG00000039878	protein_coding	Slc39a5	ENSMUST00000219131	protein_coding		10	-1	128400517	709
ENSMUSG00000044222	protein_coding	Defb13	ENSMUST00000060587	protein_coding	principal1	8	1	21946762	452
ENSMUSG00000114483	antisense	Gm49144	ENSMUST00000225846	antisense		13	1	36836366	841
ENSMUSG00000020069	protein_coding	Hnrnph3	ENSMUST00000118898	protein_coding	alternative1	10	-1	63023894	2168
ENSMUSG00000099025	lincRNA	Gm27162	ENSMUST00000185169	lincRNA		9	-1	32928966	2478
ENSMUSG00000090102	protein_coding	Gm4985	ENSMUST00000118300	protein_coding	principal1	X	-1	23958934	1233
ENSMUSG00000039878	protein_coding	Slc39a5	ENSMUST00000218858	protein_coding		10	-1	128400466	648
ENSMUSG00000083099	unprocessed_pseudogene	Gm4732	ENSMUST00000118778	unprocessed_pseudogene		X	-1	24264917	473
ENSMUSG00000012848	protein_coding	Rps5	ENSMUST00000004554	protein_coding	principal1	7	1	12922290	761
ENSMUSG00000039878	protein_coding	Slc39a5	ENSMUST00000219222	retained_intron		10	-1	128401210	766
ENSMUSG00000103021	processed_pseudogene	Gm37682	ENSMUST00000191776	processed_pseudogene		1	1	157596306	522
ENSMUSG00000039878	protein_coding	Slc39a5	ENSMUST00000167859	protein_coding	principal1	10	-1	128400466	2025
ENSMUSG00000020069	protein_coding	Hnrnph3	ENSMUST00000140743	nonsense_mediated_decay		10	-1	63024217	1633
ENSMUSG00000012848	protein_coding	Rps5	ENSMUST00000147435	protein_coding		7	1	12922318	778
ENSMUSG00000036110	protein_coding	Slc17a2	ENSMUST00000006786	protein_coding	principal2	13	1	23807027	4629
ENSMUSG00000066361	protein_coding	Serpina3c	ENSMUST00000085050	protein_coding	principal1	12	-1	104153870	2213
ENSMUSG00000103501	processed_pseudogene	Gm7412	ENSMUST00000191692	processed_pseudogene		1	-1	157601415	605
ENSMUSG00000090761	antisense	Gm17201	ENSMUST00000167226	antisense		10	-1	128395563	390
ENSMUSG00000020069	protein_coding	Hnrnph3	ENSMUST00000119814	protein_coding		10	-1	63023847	682
ENSMUSG00000020069	protein_coding	Hnrnph3	ENSMUST00000143689	retained_intron		10	-1	63018084	802
ENSMUSG00000083475	unprocessed_pseudogene	Gm9440	ENSMUST00000119667	unprocessed_pseudogene		X	1	24319797	539
ENSMUSG00000118079	lincRNA	Gm50181	ENSMUST00000236692	lincRNA		19	1	17873829	452
ENSMUSG00000012848	protein_coding	Rps5	ENSMUST00000139349	retained_intron		7	1	12922331	1248
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000230747	nonsense_mediated_decay		17	1	71769691	2537
ENSMUSG00000020069	protein_coding	Hnrnph3	ENSMUST00000141616	retained_intron		10	-1	63016168	651
ENSMUSG00000012848	protein_coding	Rps5	ENSMUST00000131795	retained_intron		7	1	12922336	445
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000231105	nonsense_mediated_decay		17	1	71769691	2430
ENSMUSG00000012848	protein_coding	Rps5	ENSMUST00000137329	protein_coding		7	1	12922437	652
ENSMUSG00000091573	unprocessed_pseudogene	Serpina3d-ps	ENSMUST00000163110	unprocessed_pseudogene		12	-1	104178296	1272
ENSMUSG00000036110	protein_coding	Slc17a2	ENSMUST00000139572	retained_intron		13	1	23807045	3863
ENSMUSG00000086902	lincRNA	Gm11728	ENSMUST00000150628	lincRNA		11	-1	117040193	660
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000230427	protein_coding		17	1	71769698	1154
ENSMUSG00000084985	antisense	Gm16135	ENSMUST00000129470	antisense		10	1	62998779	568
ENSMUSG00000086902	lincRNA	Gm11728	ENSMUST00000152401	lincRNA		11	-1	117040188	420
ENSMUSG00000030861	protein_coding	Acadsb	ENSMUST00000015829	protein_coding	principal2	7	1	131410601	6081
ENSMUSG00000102245	processed_pseudogene	Gm37713	ENSMUST00000191746	processed_pseudogene		1	1	157621272	198
ENSMUSG00000096948	antisense	Gm4221	ENSMUST00000237582	antisense		18	1	54990265	420
ENSMUSG00000036110	protein_coding	Slc17a2	ENSMUST00000099697	protein_coding	alternative2	13	1	23807048	1893
ENSMUSG00000038365	protein_coding	Fbxo25	ENSMUST00000209913	protein_coding	alternative2	8	1	13907803	2035
ENSMUSG00000020070	protein_coding	Rufy2	ENSMUST00000143726	retained_intron		10	1	63002257	720
ENSMUSG00000070942	protein_coding	Il1rl2	ENSMUST00000192551	retained_intron		1	1	40324610	3468
ENSMUSG00000059263	protein_coding	Usp47	ENSMUST00000106653	protein_coding	principal3	7	1	112023504	5540
ENSMUSG00000079112	protein_coding	Fam90a1a	ENSMUST00000110741	protein_coding	principal1	8	1	21958714	1887
ENSMUSG00000020070	protein_coding	Rufy2	ENSMUST00000156302	protein_coding		10	1	62981428	283
ENSMUSG00000030861	protein_coding	Acadsb	ENSMUST00000117518	protein_coding	alternative2	7	1	131410703	2466
ENSMUSG00000102184	TEC	Gm37192	ENSMUST00000194479	TEC		9	1	32971037	1348
ENSMUSG00000096948	antisense	Gm4221	ENSMUST00000181538	antisense		18	1	54990310	1232
ENSMUSG00000103962	processed_pseudogene	Gm38213	ENSMUST00000193203	processed_pseudogene		1	-1	157622136	173
ENSMUSG00000096948	antisense	Gm4221	ENSMUST00000181765	antisense		18	1	55057585	2988
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000036176	protein_coding	alternative2	15	-1	76818083	4500
ENSMUSG00000030861	protein_coding	Acadsb	ENSMUST00000135633	processed_transcript		7	1	131410735	600
ENSMUSG00000059263	protein_coding	Usp47	ENSMUST00000215510	protein_coding		7	1	112023506	4697
ENSMUSG00000030861	protein_coding	Acadsb	ENSMUST00000133277	protein_coding		7	1	131410775	632
ENSMUSG00000098519	lincRNA	Gm27166	ENSMUST00000184476	lincRNA		9	1	33031791	1930
ENSMUSG00000042269	protein_coding	Fam92b	ENSMUST00000048786	protein_coding	principal1	8	-1	120177466	1187
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000065398	protein_coding	principal1	2	1	31974436	6605
ENSMUSG00000038365	protein_coding	Fbxo25	ENSMUST00000043520	protein_coding	principal3	8	1	13907803	2012
ENSMUSG00000030861	protein_coding	Acadsb	ENSMUST00000151995	retained_intron		7	1	131428584	429
ENSMUSG00000102789	TEC	Gm38256	ENSMUST00000192097	TEC		1	1	157940385	950
ENSMUSG00000079654	protein_coding	Prrt4	ENSMUST00000159200	protein_coding	principal1	6	-1	29179584	3411
ENSMUSG00000017049	protein_coding	Ccdc70	ENSMUST00000070649	protein_coding	principal1	8	1	21969775	961
ENSMUSG00000098485	unprocessed_pseudogene	Gm6956	ENSMUST00000134724	unprocessed_pseudogene		X	-1	24418902	546
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000239134	protein_coding	alternative2	15	-1	76818170	4494
ENSMUSG00000038365	protein_coding	Fbxo25	ENSMUST00000210280	protein_coding		8	1	13926979	737
ENSMUSG00000099738	unprocessed_pseudogene	Gm28483	ENSMUST00000189519	unprocessed_pseudogene		Y	-1	71780564	696
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000130975	retained_intron		2	1	31974486	738
ENSMUSG00000005871	protein_coding	Apc	ENSMUST00000171187	protein_coding		18	1	34220924	3588
ENSMUSG00000042269	protein_coding	Fam92b	ENSMUST00000153177	retained_intron		8	-1	120177363	600
ENSMUSG00000059263	protein_coding	Usp47	ENSMUST00000211791	retained_intron		7	1	112023545	4441
ENSMUSG00000042269	protein_coding	Fam92b	ENSMUST00000135567	protein_coding		8	-1	120177427	457
ENSMUSG00000038365	protein_coding	Fbxo25	ENSMUST00000209290	retained_intron		8	1	13929294	646
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000176724	retained_intron		15	-1	76725603	598
ENSMUSG00000113493	processed_pseudogene	Gm7441	ENSMUST00000220697	processed_pseudogene		13	1	13842242	1074
ENSMUSG00000030861	protein_coding	Acadsb	ENSMUST00000156261	retained_intron		7	1	131429811	2827
ENSMUSG00000042269	protein_coding	Fam92b	ENSMUST00000142478	retained_intron		8	-1	120177447	436
ENSMUSG00000038365	protein_coding	Fbxo25	ENSMUST00000209310	retained_intron		8	1	13938462	781
ENSMUSG00000059263	protein_coding	Usp47	ENSMUST00000210309	protein_coding	alternative1	7	1	112023565	5816
ENSMUSG00000085104	lincRNA	Gm11731	ENSMUST00000139704	lincRNA		11	1	117058425	670
ENSMUSG00000030861	protein_coding	Acadsb	ENSMUST00000136612	retained_intron		7	1	131432001	273
ENSMUSG00000017049	protein_coding	Ccdc70	ENSMUST00000017193	protein_coding	principal1	8	1	21970596	1054
ENSMUSG00000101988	unprocessed_pseudogene	Gm28484	ENSMUST00000190606	unprocessed_pseudogene		Y	-1	71817211	312
ENSMUSG00000115026	bidirectional_promoter_lncRNA	Gm49041	ENSMUST00000227758	bidirectional_promoter_lncRNA		6	1	39207068	544
ENSMUSG00000072675	protein_coding	Duxbl2	ENSMUST00000172038	protein_coding		14	1	26118855	2248
ENSMUSG00000111645	lincRNA	Gm32171	ENSMUST00000217419	lincRNA		9	1	33151292	1043
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000177011	retained_intron		15	-1	76818129	4145
ENSMUSG00000102712	TEC	Gm37758	ENSMUST00000194275	TEC		9	-1	33160690	629
ENSMUSG00000059263	protein_coding	Usp47	ENSMUST00000210591	retained_intron		7	1	112023656	2784
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000176855	protein_coding		15	-1	76794825	669
ENSMUSG00000111467	lincRNA	Gm47775	ENSMUST00000215382	lincRNA		9	1	33296244	684
ENSMUSG00000059263	protein_coding	Usp47	ENSMUST00000210526	retained_intron		7	1	112090706	3483
ENSMUSG00000107365	lincRNA	Gm43479	ENSMUST00000200801	lincRNA		6	1	39240114	529
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000176219	protein_coding		15	-1	76818106	542
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000177026	protein_coding		15	-1	76817996	371
ENSMUSG00000087133	lincRNA	Gm27192	ENSMUST00000136428	lincRNA		X	-1	24424779	581
ENSMUSG00000113811	lincRNA	Gm47882	ENSMUST00000223012	lincRNA		13	1	13862534	3476
ENSMUSG00000113258	processed_pseudogene	Gm7446	ENSMUST00000221035	processed_pseudogene		13	-1	13891999	1240
ENSMUSG00000111878	lincRNA	Gm47777	ENSMUST00000213509	lincRNA		9	-1	33492014	425
ENSMUSG00000101336	unprocessed_pseudogene	Gm28480	ENSMUST00000186383	unprocessed_pseudogene		Y	-1	71965059	453
ENSMUSG00000111276	lincRNA	Gm47778	ENSMUST00000215867	lincRNA		9	1	33597365	975
ENSMUSG00000114087	processed_pseudogene	Gm7046	ENSMUST00000221351	processed_pseudogene		13	-1	13910408	977
ENSMUSG00000079884	processed_pseudogene	Gm10698	ENSMUST00000182663	processed_pseudogene		9	1	33728247	604
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000177255	retained_intron		15	-1	76818141	730
ENSMUSG00000101593	unprocessed_pseudogene	Gm20842	ENSMUST00000187463	unprocessed_pseudogene		Y	-1	72039692	696
ENSMUSG00000111265	lincRNA	Gm47784	ENSMUST00000215702	lincRNA		9	1	33861203	124
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000175843	protein_coding		15	-1	76817970	475
ENSMUSG00000110771	lincRNA	Gm47785	ENSMUST00000215057	lincRNA		9	1	33901917	1803
ENSMUSG00000072675	protein_coding	Duxbl2	ENSMUST00000174564	protein_coding		14	1	26119173	956
ENSMUSG00000113310	bidirectional_promoter_lncRNA	Gm47884	ENSMUST00000222573	bidirectional_promoter_lncRNA		13	1	13953219	1120
ENSMUSG00000024935	protein_coding	Slc1a1	ENSMUST00000025875	protein_coding	principal1	19	1	28835074	3800
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000176736	protein_coding		15	-1	76818076	293
ENSMUSG00000042812	protein_coding	Foxf1	ENSMUST00000181504	protein_coding	principal1	8	1	121084386	2415
ENSMUSG00000072675	protein_coding	Duxbl2	ENSMUST00000173617	protein_coding		14	1	26119811	556
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000239003	protein_coding	alternative2	15	-1	76818170	4587
ENSMUSG00000033697	protein_coding	Arhgap39	ENSMUST00000077821	protein_coding	principal3	15	-1	76818170	4494
ENSMUSG00000024935	protein_coding	Slc1a1	ENSMUST00000237545	retained_intron		19	1	28835135	2285
ENSMUSG00000072675	protein_coding	Duxbl2	ENSMUST00000172861	processed_transcript		14	1	26120145	484
ENSMUSG00000017781	protein_coding	Pitpna	ENSMUST00000143219	protein_coding	principal2	11	1	75588097	3761
ENSMUSG00000033967	protein_coding	Rnf225	ENSMUST00000045870	protein_coding	principal1	7	1	12927416	3239
ENSMUSG00000017781	protein_coding	Pitpna	ENSMUST00000140841	retained_intron		11	1	75588159	594
ENSMUSG00000017781	protein_coding	Pitpna	ENSMUST00000102509	nonsense_mediated_decay		11	1	75588159	1245
ENSMUSG00000097115	lincRNA	1810019N24Rik	ENSMUST00000181128	lincRNA		7	-1	12961768	1474
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000129496	processed_transcript		2	1	31979772	628
ENSMUSG00000097115	lincRNA	1810019N24Rik	ENSMUST00000191346	lincRNA		7	-1	12950066	377
ENSMUSG00000052713	protein_coding	Zfp608	ENSMUST00000064763	protein_coding	principal1	18	-1	54990166	6095
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000153096	processed_transcript		2	1	31994821	925
ENSMUSG00000017781	protein_coding	Pitpna	ENSMUST00000153768	processed_transcript		11	1	75620671	384
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000126301	protein_coding		2	1	31997961	295
ENSMUSG00000102084	lincRNA	Gm29638	ENSMUST00000186106	lincRNA		7	1	12959299	371
ENSMUSG00000072675	protein_coding	Duxbl2	ENSMUST00000100810	protein_coding	principal1	14	1	26122609	2312
ENSMUSG00000071645	protein_coding	Tut1	ENSMUST00000096239	protein_coding	principal1	19	1	8953847	2753
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000130185	processed_transcript		2	1	32010269	629
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000123062	processed_transcript		2	1	32025295	667
ENSMUSG00000098369	unprocessed_pseudogene	Gm2274	ENSMUST00000184539	unprocessed_pseudogene		14	1	26156036	609
ENSMUSG00000017781	protein_coding	Pitpna	ENSMUST00000179445	protein_coding	alternative1	11	1	75588119	1665
ENSMUSG00000024935	protein_coding	Slc1a1	ENSMUST00000161119	retained_intron		19	1	28835135	1762
ENSMUSG00000071645	protein_coding	Tut1	ENSMUST00000236564	retained_intron		19	1	8953930	1858
ENSMUSG00000117600	TEC	Gm50094	ENSMUST00000234954	TEC		18	-1	13903470	2935
ENSMUSG00000084063	protein_coding	Gm5934	ENSMUST00000120734	protein_coding	principal1	X	-1	24500760	2588
ENSMUSG00000071645	protein_coding	Tut1	ENSMUST00000237611	retained_intron		19	1	8963844	597
ENSMUSG00000017781	protein_coding	Pitpna	ENSMUST00000179521	protein_coding	alternative1	11	1	75588108	3727
ENSMUSG00000024308	protein_coding	Tapbp	ENSMUST00000025161	protein_coding	principal2	17	1	33919332	2898
ENSMUSG00000005871	protein_coding	Apc	ENSMUST00000079362	protein_coding	principal2	18	1	34220984	12811
ENSMUSG00000024935	protein_coding	Slc1a1	ENSMUST00000160702	retained_intron		19	1	28893013	2665
ENSMUSG00000052713	protein_coding	Zfp608	ENSMUST00000238150	processed_transcript		18	-1	54956757	4243
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000138012	protein_coding		2	1	32033976	3569
ENSMUSG00000024935	protein_coding	Slc1a1	ENSMUST00000162189	retained_intron		19	1	28895793	2161
ENSMUSG00000052713	protein_coding	Zfp608	ENSMUST00000237844	nonsense_mediated_decay		18	-1	54992555	5101
ENSMUSG00000024308	protein_coding	Tapbp	ENSMUST00000172888	retained_intron		17	1	33919512	718
ENSMUSG00000052713	protein_coding	Zfp608	ENSMUST00000237009	retained_intron		18	-1	54895562	2486
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000152791	protein_coding		2	1	32042518	466
ENSMUSG00000117822	processed_pseudogene	Eef1a1-ps1	ENSMUST00000236146	processed_pseudogene		19	1	17926623	1387
ENSMUSG00000024308	protein_coding	Tapbp	ENSMUST00000234247	protein_coding	alternative2	17	1	33919637	2589
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000146138	retained_intron		2	1	32050995	915
ENSMUSG00000028538	protein_coding	St3gal3	ENSMUST00000030263	protein_coding	principal3	4	-1	118134890	2549
ENSMUSG00000001855	protein_coding	Nup214	ENSMUST00000124455	retained_intron		2	1	32051692	354
ENSMUSG00000086192	antisense	Gm13609	ENSMUST00000141023	antisense		2	-1	32017344	589
ENSMUSG00000080776	processed_pseudogene	Gm12174	ENSMUST00000119853	processed_pseudogene		11	1	46727818	813
ENSMUSG00000024308	protein_coding	Tapbp	ENSMUST00000234320	protein_coding		17	1	33919828	367
ENSMUSG00000024308	protein_coding	Tapbp	ENSMUST00000234273	processed_transcript		17	1	33920527	1305
ENSMUSG00000066543	processed_pseudogene	Rpl17-ps9	ENSMUST00000119541	processed_pseudogene		7	1	36118274	555
ENSMUSG00000028538	protein_coding	St3gal3	ENSMUST00000106410	protein_coding	principal3	4	-1	118134914	2225
ENSMUSG00000024308	protein_coding	Tapbp	ENSMUST00000172489	processed_transcript		17	1	33920528	649
ENSMUSG00000082626	processed_pseudogene	Rps13-ps5	ENSMUST00000117939	processed_pseudogene		11	-1	61206175	456
ENSMUSG00000027880	protein_coding	Slc25a54	ENSMUST00000029478	protein_coding	principal1	3	1	109080469	1673
ENSMUSG00000070942	protein_coding	Il1rl2	ENSMUST00000095020	protein_coding	principal1	1	1	40324627	1950
ENSMUSG00000098016	processed_pseudogene	Gm9211	ENSMUST00000182882	processed_pseudogene		7	1	36234292	975
ENSMUSG00000028538	protein_coding	St3gal3	ENSMUST00000097912	protein_coding	alternative1	4	-1	118134882	2143
ENSMUSG00000117687	lincRNA	Gm50182	ENSMUST00000238056	lincRNA		19	1	18028111	663
ENSMUSG00000005871	protein_coding	Apc	ENSMUST00000170023	retained_intron		18	1	34221013	1825
ENSMUSG00000024308	protein_coding	Tapbp	ENSMUST00000172653	retained_intron		17	1	33926118	614
ENSMUSG00000028538	protein_coding	St3gal3	ENSMUST00000138274	protein_coding		4	-1	118031882	809
ENSMUSG00000070942	protein_coding	Il1rl2	ENSMUST00000194296	protein_coding	principal1	1	1	40324690	3908
ENSMUSG00000072674	protein_coding	Plac9b	ENSMUST00000184142	protein_coding	principal1	14	-1	26182480	1040
ENSMUSG00000028538	protein_coding	St3gal3	ENSMUST00000126336	protein_coding		4	-1	117968448	608
ENSMUSG00000051390	protein_coding	Zbtb22	ENSMUST00000174463	protein_coding		17	1	33915904	387
ENSMUSG00000101965	lincRNA	Gm29129	ENSMUST00000191121	lincRNA		7	1	36568743	659
ENSMUSG00000005871	protein_coding	Apc	ENSMUST00000163295	nonsense_mediated_decay		18	1	34221252	608
ENSMUSG00000070942	protein_coding	Il1rl2	ENSMUST00000193388	protein_coding		1	1	40325611	693
ENSMUSG00000103230	processed_pseudogene	Gm17970	ENSMUST00000192199	processed_pseudogene		1	1	40353852	685
ENSMUSG00000027880	protein_coding	Slc25a54	ENSMUST00000159926	nonsense_mediated_decay		3	1	109080499	1518
ENSMUSG00000028099	protein_coding	Polr3c	ENSMUST00000029741	protein_coding	principal1	3	-1	96727628	2390
ENSMUSG00000005871	protein_coding	Apc	ENSMUST00000170195	retained_intron		18	1	34247694	2732
ENSMUSG00000064202	protein_coding	4430402I18Rik	ENSMUST00000175647	nonsense_mediated_decay		19	-1	28967730	1812
ENSMUSG00000104330	TEC	Gm38285	ENSMUST00000192928	TEC		7	1	36695438	922
ENSMUSG00000005871	protein_coding	Apc	ENSMUST00000066133	protein_coding		18	1	34247698	1185
ENSMUSG00000072674	protein_coding	Plac9b	ENSMUST00000100809	protein_coding		14	-1	26170283	388
ENSMUSG00000005871	protein_coding	Apc	ENSMUST00000165590	nonsense_mediated_decay		18	1	34299966	2633
ENSMUSG00000094708	processed_pseudogene	Gm10359	ENSMUST00000180167	processed_pseudogene		5	-1	105863702	1002
ENSMUSG00000105139	processed_transcript	Gm19391	ENSMUST00000196653	lincRNA		3	-1	109122895	999
ENSMUSG00000105139	processed_transcript	Gm19391	ENSMUST00000198512	processed_transcript		3	-1	109122673	2132
ENSMUSG00000059901	protein_coding	Adamts14	ENSMUST00000092486	protein_coding	principal2	10	-1	61273438	5188
ENSMUSG00000087371	antisense	Gm15541	ENSMUST00000147449	antisense		7	-1	27508122	2713
ENSMUSG00000072674	protein_coding	Plac9b	ENSMUST00000184675	protein_coding		14	-1	26181854	536
ENSMUSG00000028099	protein_coding	Polr3c	ENSMUST00000154679	protein_coding	principal1	3	-1	96727441	2406
ENSMUSG00000005871	protein_coding	Apc	ENSMUST00000167136	processed_transcript		18	1	34301261	435
ENSMUSG00000072674	protein_coding	Plac9b	ENSMUST00000183811	protein_coding		14	-1	26181856	396
ENSMUSG00000059901	protein_coding	Adamts14	ENSMUST00000120336	protein_coding	alternative2	10	-1	61273242	3645
ENSMUSG00000098463	protein_coding	Cphx2	ENSMUST00000183356	processed_transcript		14	1	26081516	518
ENSMUSG00000005871	protein_coding	Apc	ENSMUST00000115781	protein_coding	alternative2	18	1	34220984	12346
ENSMUSG00000104454	TEC	Gm37827	ENSMUST00000194486	TEC		7	1	36733017	1542
ENSMUSG00000028099	protein_coding	Polr3c	ENSMUST00000128918	nonsense_mediated_decay		3	-1	96723819	662
ENSMUSG00000073607	transcribed_processed_pseudogene	Gm10548	ENSMUST00000097631	processed_transcript		18	-1	34221772	2629
ENSMUSG00000073607	transcribed_processed_pseudogene	Gm10548	ENSMUST00000165672	transcribed_processed_pseudogene		18	-1	34210070	272
ENSMUSG00000028099	protein_coding	Polr3c	ENSMUST00000137009	retained_intron		3	-1	96727476	1628
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000207370	protein_coding	alternative1	7	-1	44986492	2147
ENSMUSG00000098463	protein_coding	Cphx2	ENSMUST00000168149	protein_coding	principal1	14	1	26082245	1710
ENSMUSG00000051390	protein_coding	Zbtb22	ENSMUST00000053429	protein_coding	principal1	17	1	33916171	2612
ENSMUSG00000028099	protein_coding	Polr3c	ENSMUST00000141377	protein_coding		3	-1	96727454	808
ENSMUSG00000111894	lincRNA	Gm47843	ENSMUST00000219823	lincRNA		10	-1	23609431	893
ENSMUSG00000112868	lincRNA	4930520K02Rik	ENSMUST00000219658	lincRNA		10	-1	23622148	396
ENSMUSG00000112868	lincRNA	4930520K02Rik	ENSMUST00000219522	lincRNA		10	-1	23622148	388
ENSMUSG00000098463	protein_coding	Cphx2	ENSMUST00000184089	retained_intron		14	1	26091561	570
ENSMUSG00000082798	unprocessed_pseudogene	Gm11561	ENSMUST00000117429	unprocessed_pseudogene		11	1	99955607	417
ENSMUSG00000081547	unprocessed_pseudogene	Gm11553	ENSMUST00000120682	unprocessed_pseudogene		11	1	99961079	240
ENSMUSG00000028099	protein_coding	Polr3c	ENSMUST00000125183	protein_coding		3	-1	96727475	923
ENSMUSG00000101438	antisense	Gm19412	ENSMUST00000185388	antisense		17	-1	33920485	764
ENSMUSG00000078254	protein_coding	Krtap29-1	ENSMUST00000105051	protein_coding	principal1	11	-1	99979053	1029
ENSMUSG00000101438	antisense	Gm19412	ENSMUST00000189156	antisense		17	-1	33920289	569
ENSMUSG00000105976	TEC	Gm42782	ENSMUST00000197286	TEC		3	1	96784325	522
ENSMUSG00000091048	unprocessed_pseudogene	Gm8207	ENSMUST00000171204	unprocessed_pseudogene		14	1	44138385	502
ENSMUSG00000104795	TEC	Gm42783	ENSMUST00000197075	TEC		3	-1	96725320	795
ENSMUSG00000104241	processed_pseudogene	Gm9442	ENSMUST00000194242	processed_pseudogene		3	-1	51403162	319
ENSMUSG00000021217	protein_coding	Tshz3	ENSMUST00000021641	protein_coding	principal1	7	1	36698118	5098
ENSMUSG00000058019	protein_coding	Ces5a	ENSMUST00000212009	protein_coding	principal1	8	-1	93535707	2042
ENSMUSG00000036899	protein_coding	Trpv5	ENSMUST00000031901	protein_coding	principal2	6	-1	41680769	3243
ENSMUSG00000085055	antisense	Gm15958	ENSMUST00000153479	antisense		18	1	66291274	2087
ENSMUSG00000104036	TEC	Gm37775	ENSMUST00000194120	TEC		1	-1	149437327	2313
ENSMUSG00000021217	protein_coding	Tshz3	ENSMUST00000176413	processed_transcript		7	1	36698217	431
ENSMUSG00000103724	TEC	Gm37096	ENSMUST00000192317	TEC		1	-1	149433967	2058
ENSMUSG00000037709	protein_coding	Fam13a	ENSMUST00000089860	protein_coding	principal2	6	-1	59024549	5786
ENSMUSG00000086306	lincRNA	Gm11754	ENSMUST00000156576	lincRNA		11	-1	119111425	661
ENSMUSG00000102516	TEC	Gm38340	ENSMUST00000195039	TEC		7	1	36721846	4008
ENSMUSG00000036899	protein_coding	Trpv5	ENSMUST00000193503	protein_coding	alternative2	6	-1	41680655	2025
ENSMUSG00000078253	protein_coding	Krtap16-1	ENSMUST00000105050	protein_coding	principal1	11	-1	99986597	1888
ENSMUSG00000085055	antisense	Gm15958	ENSMUST00000143568	antisense		18	1	66291887	385
ENSMUSG00000085055	antisense	Gm15958	ENSMUST00000237190	antisense		18	1	66291950	1563
ENSMUSG00000104420	TEC	E230020A03Rik	ENSMUST00000194646	TEC		7	1	36727177	2386
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000133436	nonsense_mediated_decay		19	-1	5488016	2070
ENSMUSG00000037709	protein_coding	Fam13a	ENSMUST00000173193	protein_coding	alternative2	6	-1	59024340	1998
ENSMUSG00000082591	processed_pseudogene	Gm11558	ENSMUST00000118454	processed_pseudogene		11	-1	99988592	459
ENSMUSG00000086547	lincRNA	Gm11755	ENSMUST00000144096	lincRNA		11	-1	119138421	891
ENSMUSG00000103882	TEC	Gm37452	ENSMUST00000194416	TEC		7	1	36710174	1160
ENSMUSG00000101011	lincRNA	Gm29398	ENSMUST00000191253	lincRNA		1	-1	149449951	662
ENSMUSG00000117764	sense_intronic	Gm50143	ENSMUST00000236179	sense_intronic		18	-1	66218288	979
ENSMUSG00000053198	protein_coding	Prx	ENSMUST00000238964	protein_coding		7	1	27497388	4575
ENSMUSG00000118028	lincRNA	Gm50215	ENSMUST00000235804	lincRNA		18	-1	69910724	2989
ENSMUSG00000037709	protein_coding	Fam13a	ENSMUST00000173712	processed_transcript		6	-1	59024422	759
ENSMUSG00000078252	protein_coding	Krtap17-1	ENSMUST00000105049	protein_coding	principal1	11	-1	99993994	761
ENSMUSG00000101011	lincRNA	Gm29398	ENSMUST00000186355	lincRNA		1	-1	149449950	1491
ENSMUSG00000024420	protein_coding	Zfp521	ENSMUST00000025288	protein_coding	principal1	18	-1	13972787	6206
ENSMUSG00000085530	processed_pseudogene	Gm13901	ENSMUST00000137252	processed_pseudogene		2	1	106916771	468
ENSMUSG00000037709	protein_coding	Fam13a	ENSMUST00000174307	retained_intron		6	-1	59024504	586
ENSMUSG00000098390	lincRNA	Gm3434	ENSMUST00000184421	lincRNA		9	-1	36135578	521
ENSMUSG00000084164	processed_pseudogene	Gm13902	ENSMUST00000120168	processed_pseudogene		2	-1	106927169	605
ENSMUSG00000058019	protein_coding	Ces5a	ENSMUST00000080391	processed_transcript		8	-1	93506768	987
ENSMUSG00000037709	protein_coding	Fam13a	ENSMUST00000204616	retained_intron		6	-1	59024443	4309
ENSMUSG00000107439	antisense	Gm45060	ENSMUST00000203293	antisense		6	1	58964874	593
ENSMUSG00000024420	protein_coding	Zfp521	ENSMUST00000234480	nonsense_mediated_decay		18	-1	13845043	3457
ENSMUSG00000058019	protein_coding	Ces5a	ENSMUST00000212690	processed_transcript		8	-1	93513533	525
ENSMUSG00000098390	lincRNA	Gm3434	ENSMUST00000183877	lincRNA		9	-1	36135630	416
ENSMUSG00000024420	protein_coding	Zfp521	ENSMUST00000234410	protein_coding	principal1	18	-1	13971720	5032
ENSMUSG00000113111	processed_pseudogene	Gm7754	ENSMUST00000223075	processed_pseudogene		12	1	62161957	2064
ENSMUSG00000058019	protein_coding	Ces5a	ENSMUST00000212407	processed_transcript		8	-1	93513559	456
ENSMUSG00000113395	processed_pseudogene	Gm48365	ENSMUST00000220734	processed_pseudogene		12	1	62257849	2735
ENSMUSG00000115294	antisense	1700047E10Rik	ENSMUST00000227115	antisense		14	-1	44213237	568
ENSMUSG00000058019	protein_coding	Ces5a	ENSMUST00000212722	protein_coding		8	-1	93535830	914
ENSMUSG00000113071	processed_pseudogene	Gm6353	ENSMUST00000223234	processed_pseudogene		12	1	62365255	1051
ENSMUSG00000024420	protein_coding	Zfp521	ENSMUST00000234502	retained_intron		18	-1	13843832	502
ENSMUSG00000113523	processed_pseudogene	Gm48366	ENSMUST00000222526	processed_pseudogene		12	-1	62375371	3175
ENSMUSG00000024420	protein_coding	Zfp521	ENSMUST00000234237	processed_transcript		18	-1	13972648	691
ENSMUSG00000029484	protein_coding	Anxa3	ENSMUST00000199330	protein_coding		5	1	96793339	376
ENSMUSG00000024420	protein_coding	Zfp521	ENSMUST00000234523	processed_transcript		18	-1	13876326	486
ENSMUSG00000024420	protein_coding	Zfp521	ENSMUST00000234025	protein_coding		18	-1	13972548	354
ENSMUSG00000113153	processed_pseudogene	Gm48367	ENSMUST00000223532	processed_pseudogene		12	-1	62464279	331
ENSMUSG00000094543	protein_coding	Gm8212	ENSMUST00000166350	protein_coding	principal1	14	1	44197661	1404
ENSMUSG00000057506	protein_coding	Bloc1s2	ENSMUST00000237630	protein_coding		19	-1	44146443	778
ENSMUSG00000058019	protein_coding	Ces5a	ENSMUST00000077816	protein_coding	principal1	8	-1	93535707	1728
ENSMUSG00000115498	unprocessed_pseudogene	Gm49104	ENSMUST00000226200	unprocessed_pseudogene		14	1	44210608	254
ENSMUSG00000113890	processed_pseudogene	Gm48368	ENSMUST00000222266	processed_pseudogene		12	1	62535346	1804
ENSMUSG00000066767	transcribed_processed_pseudogene	Gm3867	ENSMUST00000181639	processed_transcript		9	-1	36258323	2007
ENSMUSG00000066767	transcribed_processed_pseudogene	Gm3867	ENSMUST00000086108	transcribed_processed_pseudogene		9	-1	36257765	279
ENSMUSG00000111023	transcribed_processed_pseudogene	Gm48391	ENSMUST00000213739	transcribed_processed_pseudogene		9	1	36249948	3813
ENSMUSG00000058793	protein_coding	Cds2	ENSMUST00000110158	protein_coding		2	1	132263148	1247
ENSMUSG00000101444	transcribed_unprocessed_pseudogene	Gm29179	ENSMUST00000190450	processed_transcript		Y	-1	72070812	1137
ENSMUSG00000057506	protein_coding	Bloc1s2	ENSMUST00000079033	protein_coding	principal1	19	-1	44146446	885
ENSMUSG00000111023	transcribed_processed_pseudogene	Gm48391	ENSMUST00000213629	processed_transcript		9	1	36254660	672
ENSMUSG00000039509	protein_coding	Nup133	ENSMUST00000044795	protein_coding	principal1	8	-1	123949265	5808
ENSMUSG00000057506	protein_coding	Bloc1s2	ENSMUST00000237613	processed_transcript		19	-1	44142578	563
ENSMUSG00000008789	protein_coding	Ceacam5	ENSMUST00000081907	protein_coding	principal1	7	1	17713238	3273
ENSMUSG00000039509	protein_coding	Nup133	ENSMUST00000213089	processed_transcript		8	-1	123915635	716
ENSMUSG00000057506	protein_coding	Bloc1s2	ENSMUST00000237867	processed_transcript		19	-1	44146399	683
ENSMUSG00000046318	protein_coding	Ccbe1	ENSMUST00000146610	retained_intron		18	-1	66291446	3261
ENSMUSG00000072595	protein_coding	4930503E14Rik	ENSMUST00000100688	protein_coding	principal1	14	-1	44171371	1287
ENSMUSG00000063830	processed_pseudogene	Gm6065	ENSMUST00000081336	processed_pseudogene		7	1	17792574	492
ENSMUSG00000057506	protein_coding	Bloc1s2	ENSMUST00000236380	processed_transcript		19	-1	44146430	429
ENSMUSG00000087404	lincRNA	Gm11752	ENSMUST00000143291	lincRNA		11	1	119220160	510
ENSMUSG00000072595	protein_coding	4930503E14Rik	ENSMUST00000226475	processed_transcript		14	-1	44173828	700
ENSMUSG00000072595	protein_coding	4930503E14Rik	ENSMUST00000226164	protein_coding		14	-1	44213254	696
ENSMUSG00000101342	lincRNA	Gm28078	ENSMUST00000190381	lincRNA		7	-1	37128692	874
ENSMUSG00000097121	antisense	D130020L05Rik	ENSMUST00000222895	antisense		12	1	101082451	2557
ENSMUSG00000039509	protein_coding	Nup133	ENSMUST00000212133	retained_intron		8	-1	123949255	2939
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000124334	protein_coding	principal1	19	-1	5488402	2067
ENSMUSG00000025374	protein_coding	Nabp2	ENSMUST00000164199	protein_coding	principal1	10	-1	128409728	1371
ENSMUSG00000097121	antisense	D130020L05Rik	ENSMUST00000180800	antisense		12	1	101082481	2431
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000140365	retained_intron		19	-1	5483573	393
ENSMUSG00000101444	transcribed_unprocessed_pseudogene	Gm29179	ENSMUST00000190621	processed_transcript		Y	-1	72070812	1100
ENSMUSG00000027361	protein_coding	Gabpb1	ENSMUST00000110425	protein_coding	alternative1	2	-1	126675568	4153
ENSMUSG00000101444	transcribed_unprocessed_pseudogene	Gm29179	ENSMUST00000190860	processed_transcript		Y	-1	72070724	302
ENSMUSG00000037152	protein_coding	Ndufc1	ENSMUST00000038108	protein_coding	principal1	3	-1	51408988	1249
ENSMUSG00000005357	protein_coding	Slc1a6	ENSMUST00000005490	protein_coding	principal1	10	1	78780496	2029
ENSMUSG00000101444	transcribed_unprocessed_pseudogene	Gm29179	ENSMUST00000186776	processed_transcript		Y	-1	72070730	655
ENSMUSG00000037152	protein_coding	Ndufc1	ENSMUST00000145572	retained_intron		3	-1	51407481	311
ENSMUSG00000005357	protein_coding	Slc1a6	ENSMUST00000217717	protein_coding		10	1	78780702	638
ENSMUSG00000105074	processed_pseudogene	Gm43818	ENSMUST00000200605	processed_pseudogene		5	1	105866361	466
ENSMUSG00000037152	protein_coding	Ndufc1	ENSMUST00000135602	processed_transcript		3	-1	51408666	500
ENSMUSG00000101444	transcribed_unprocessed_pseudogene	Gm29179	ENSMUST00000188219	processed_transcript		Y	-1	72068792	327
ENSMUSG00000025993	protein_coding	Slc40a1	ENSMUST00000027137	protein_coding	principal1	1	-1	45925582	3370
ENSMUSG00000101444	transcribed_unprocessed_pseudogene	Gm29179	ENSMUST00000188268	processed_transcript		Y	-1	72070755	255
ENSMUSG00000091553	unprocessed_pseudogene	Serpina3e-ps	ENSMUST00000165968	unprocessed_pseudogene		12	-1	104192926	1228
ENSMUSG00000037152	protein_coding	Ndufc1	ENSMUST00000193279	protein_coding	principal1	3	-1	51408964	315
ENSMUSG00000080929	processed_pseudogene	Gm12891	ENSMUST00000119358	processed_pseudogene		4	1	122925833	240
ENSMUSG00000101444	transcribed_unprocessed_pseudogene	Gm29179	ENSMUST00000188668	processed_transcript		Y	-1	72070756	543
ENSMUSG00000097121	antisense	D130020L05Rik	ENSMUST00000221614	antisense		12	1	101083678	706
ENSMUSG00000101444	transcribed_unprocessed_pseudogene	Gm29179	ENSMUST00000185781	processed_transcript		Y	-1	72070712	397
ENSMUSG00000101444	transcribed_unprocessed_pseudogene	Gm29179	ENSMUST00000189351	processed_transcript		Y	-1	72068792	230
ENSMUSG00000101444	transcribed_unprocessed_pseudogene	Gm29179	ENSMUST00000186138	transcribed_unprocessed_pseudogene		Y	-1	72069229	615
ENSMUSG00000097121	antisense	D130020L05Rik	ENSMUST00000221044	antisense		12	1	101083742	803
ENSMUSG00000097415	lincRNA	AU020206	ENSMUST00000206358	lincRNA		7	-1	75772046	3009
ENSMUSG00000097121	antisense	D130020L05Rik	ENSMUST00000220889	antisense		12	1	101083833	769
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000229952	protein_coding		17	1	71769700	2078
ENSMUSG00000114113	antisense	Gm47639	ENSMUST00000220642	antisense		12	1	101039092	310
ENSMUSG00000021377	protein_coding	Dek	ENSMUST00000138401	processed_transcript		13	-1	47098438	1946
ENSMUSG00000097415	lincRNA	AU020206	ENSMUST00000181224	lincRNA		7	-1	75782099	656
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000230333	protein_coding		17	1	71769702	2215
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000229304	nonsense_mediated_decay		17	1	71769711	2175
ENSMUSG00000097116	processed_pseudogene	Gm26729	ENSMUST00000180744	processed_pseudogene		7	1	75784032	352
ENSMUSG00000025993	protein_coding	Slc40a1	ENSMUST00000191247	retained_intron		1	-1	45925609	3928
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000230305	protein_coding		17	1	71769743	2245
ENSMUSG00000089736	protein_coding	Tgfbr3l	ENSMUST00000110993	protein_coding	principal1	8	1	4248214	1075
ENSMUSG00000025993	protein_coding	Slc40a1	ENSMUST00000188252	processed_transcript		1	-1	45923309	263
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000207659	protein_coding		7	-1	44986356	945
ENSMUSG00000025993	protein_coding	Slc40a1	ENSMUST00000186822	processed_transcript		1	-1	45925262	505
ENSMUSG00000089736	protein_coding	Tgfbr3l	ENSMUST00000124750	retained_intron		8	1	4248633	805
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000147961	retained_intron		19	-1	5487935	1982
ENSMUSG00000089736	protein_coding	Tgfbr3l	ENSMUST00000209051	retained_intron		8	1	4248878	2546
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000059042	protein_coding	principal4	5	-1	134314760	4455
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000149908	retained_intron		19	-1	5483963	536
ENSMUSG00000027361	protein_coding	Gabpb1	ENSMUST00000110424	protein_coding	principal3	2	-1	126675502	2613
ENSMUSG00000089736	protein_coding	Tgfbr3l	ENSMUST00000142865	retained_intron		8	1	4250329	639
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000146661	retained_intron		19	-1	5483967	697
ENSMUSG00000025993	protein_coding	Slc40a1	ENSMUST00000187420	protein_coding		1	-1	45926519	451
ENSMUSG00000089736	protein_coding	Tgfbr3l	ENSMUST00000208029	processed_transcript		8	1	4250937	372
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000237708	protein_coding		19	-1	5484154	501
ENSMUSG00000025993	protein_coding	Slc40a1	ENSMUST00000187406	protein_coding		1	-1	45926519	370
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000229874	protein_coding		17	1	71781299	2521
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000107843	protein_coding	principal3	7	-1	44986568	1508
ENSMUSG00000025993	protein_coding	Slc40a1	ENSMUST00000186804	protein_coding		1	-1	45926519	408
ENSMUSG00000025993	protein_coding	Slc40a1	ENSMUST00000186755	retained_intron		1	-1	45926523	2792
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000025841	nonsense_mediated_decay		19	-1	5488285	1954
ENSMUSG00000105590	TEC	Gm43364	ENSMUST00000196046	TEC		5	-1	108553354	3274
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000208829	protein_coding		7	-1	44986434	621
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000024854	protein_coding	principal1	17	1	71781947	2480
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000151932	retained_intron		19	-1	5484885	480
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000045325	protein_coding		7	-1	44986356	1071
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000154215	processed_transcript		19	-1	5485810	519
ENSMUSG00000029484	protein_coding	Anxa3	ENSMUST00000031447	protein_coding	principal1	5	1	96793385	1595
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000173341	protein_coding		5	-1	134314720	4302
ENSMUSG00000109061	protein_coding	Gm49320	ENSMUST00000145165	nonsense_mediated_decay	principal1	8	1	4238865	2879
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000230749	nonsense_mediated_decay		17	1	71782617	3357
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000209124	protein_coding		7	-1	44986319	741
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000172715	protein_coding		5	-1	134314682	4114
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000230160	protein_coding		17	1	71810885	2920
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000126471	nonsense_mediated_decay		19	-1	5488266	912
ENSMUSG00000055652	protein_coding	Klhl25	ENSMUST00000171155	protein_coding	principal1	7	1	75848310	3403
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000229014	processed_transcript		17	1	71827355	1417
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000230845	processed_transcript		17	1	71827998	1153
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000208897	retained_intron		7	-1	44978346	742
ENSMUSG00000029484	protein_coding	Anxa3	ENSMUST00000200379	protein_coding		5	1	96793441	757
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000208778	protein_coding		7	-1	44979525	578
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000231131	protein_coding		17	1	71828507	604
ENSMUSG00000024906	protein_coding	Mus81	ENSMUST00000144422	retained_intron		19	-1	5488311	748
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000207735	retained_intron		7	-1	44979859	834
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000229903	retained_intron		17	1	71831066	651
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000208312	protein_coding		7	-1	44986325	659
ENSMUSG00000055652	protein_coding	Klhl25	ENSMUST00000206019	protein_coding	principal1	7	1	75848341	2299
ENSMUSG00000027361	protein_coding	Gabpb1	ENSMUST00000103227	protein_coding	principal3	2	-1	126675544	2751
ENSMUSG00000024059	protein_coding	Clip4	ENSMUST00000230290	protein_coding		17	1	71856286	239
ENSMUSG00000025374	protein_coding	Nabp2	ENSMUST00000026439	protein_coding	principal1	10	-1	128409874	1130
ENSMUSG00000029484	protein_coding	Anxa3	ENSMUST00000198631	protein_coding		5	1	96793504	1523
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000208938	protein_coding		7	-1	44983551	467
ENSMUSG00000055652	protein_coding	Klhl25	ENSMUST00000205612	protein_coding		7	1	75848364	1343
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000209056	protein_coding		7	-1	44986316	490
ENSMUSG00000055652	protein_coding	Klhl25	ENSMUST00000206418	processed_transcript		7	1	75848397	905
ENSMUSG00000025374	protein_coding	Nabp2	ENSMUST00000166608	protein_coding		10	-1	128409722	979
ENSMUSG00000055652	protein_coding	Klhl25	ENSMUST00000205887	protein_coding		7	1	75848441	427
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000207522	nonsense_mediated_decay		7	-1	44986356	724
ENSMUSG00000025374	protein_coding	Nabp2	ENSMUST00000167456	retained_intron		10	-1	128408843	929
ENSMUSG00000109324	protein_coding	Prmt1	ENSMUST00000207702	retained_intron		7	-1	44986346	758
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000172904	processed_transcript		5	-1	134279865	3274
ENSMUSG00000071723	protein_coding	Gspt2	ENSMUST00000096368	protein_coding	principal1	X	1	94636069	2491
ENSMUSG00000055652	protein_coding	Klhl25	ENSMUST00000092073	protein_coding	principal1	7	1	75848338	3385
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000044565	protein_coding	principal1	4	1	130047840	5206
ENSMUSG00000025374	protein_coding	Nabp2	ENSMUST00000172348	protein_coding		10	-1	128409632	612
ENSMUSG00000027361	protein_coding	Gabpb1	ENSMUST00000039978	protein_coding		2	-1	126676337	1991
ENSMUSG00000039976	protein_coding	Tbc1d16	ENSMUST00000036113	protein_coding	principal3	11	-1	119228499	6986
ENSMUSG00000003662	protein_coding	Ciao1	ENSMUST00000003759	protein_coding	principal1	2	-1	127247816	3075
ENSMUSG00000071723	protein_coding	Gspt2	ENSMUST00000137033	nonsense_mediated_decay		X	1	94636076	1925
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000132251	protein_coding		4	1	130047875	410
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000174354	protein_coding	alternative1	5	-1	134314693	4084
ENSMUSG00000025374	protein_coding	Nabp2	ENSMUST00000164664	protein_coding		10	-1	128410551	614
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000174155	protein_coding	principal4	5	-1	134314693	4141
ENSMUSG00000029484	protein_coding	Anxa3	ENSMUST00000199656	retained_intron		5	1	96811066	831
ENSMUSG00000046318	protein_coding	Ccbe1	ENSMUST00000061103	nonsense_mediated_decay		18	-1	66291788	5304
ENSMUSG00000051190	protein_coding	Olfr1356	ENSMUST00000205100	protein_coding	principal1	10	-1	78852166	3023
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000174513	protein_coding	alternative1	5	-1	134314693	4021
ENSMUSG00000039976	protein_coding	Tbc1d16	ENSMUST00000207655	protein_coding	alternative2	11	-1	119228461	2855
ENSMUSG00000051190	protein_coding	Olfr1356	ENSMUST00000061289	protein_coding	principal1	10	-1	78847913	963
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000174772	protein_coding	alternative1	5	-1	134314693	4078
ENSMUSG00000029484	protein_coding	Anxa3	ENSMUST00000197339	retained_intron		5	1	96816287	692
ENSMUSG00000103923	lincRNA	Gm37896	ENSMUST00000195611	lincRNA		1	1	187447877	2791
ENSMUSG00000025374	protein_coding	Nabp2	ENSMUST00000172238	nonsense_mediated_decay		10	-1	128409180	453
ENSMUSG00000039976	protein_coding	Tbc1d16	ENSMUST00000125856	protein_coding		11	-1	119221976	233
ENSMUSG00000108495	TEC	Gm45139	ENSMUST00000206543	TEC		7	1	76000824	2057
ENSMUSG00000029484	protein_coding	Anxa3	ENSMUST00000197196	retained_intron		5	1	96827930	665
ENSMUSG00000003662	protein_coding	Ciao1	ENSMUST00000174030	protein_coding		2	-1	127247620	1109
ENSMUSG00000083438	processed_pseudogene	Gm5402	ENSMUST00000119588	processed_pseudogene		X	-1	94673120	1618
ENSMUSG00000025374	protein_coding	Nabp2	ENSMUST00000171494	protein_coding		10	-1	128411492	735
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000173485	protein_coding		5	-1	134243562	833
ENSMUSG00000085548	sense_intronic	Gm11753	ENSMUST00000151091	sense_intronic		11	-1	119184516	396
ENSMUSG00000029484	protein_coding	Anxa3	ENSMUST00000199390	retained_intron		5	1	96830083	770
ENSMUSG00000027361	protein_coding	Gabpb1	ENSMUST00000103226	protein_coding		2	-1	126675486	1338
ENSMUSG00000025374	protein_coding	Nabp2	ENSMUST00000171370	protein_coding		10	-1	128409736	441
ENSMUSG00000003662	protein_coding	Ciao1	ENSMUST00000143575	retained_intron		2	-1	127246046	581
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000172553	retained_intron		5	-1	134242411	490
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000173888	protein_coding		5	-1	134295608	2820
ENSMUSG00000003662	protein_coding	Ciao1	ENSMUST00000174863	protein_coding		2	-1	127247620	531
ENSMUSG00000111327	processed_pseudogene	Gm48401	ENSMUST00000215904	processed_pseudogene		9	-1	36380808	3835
ENSMUSG00000110812	unprocessed_pseudogene	Gm48407	ENSMUST00000215264	unprocessed_pseudogene		9	1	36381685	215
ENSMUSG00000029484	protein_coding	Anxa3	ENSMUST00000196126	protein_coding		5	1	96841998	453
ENSMUSG00000027361	protein_coding	Gabpb1	ENSMUST00000089745	protein_coding		2	-1	126675592	3254
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000173509	retained_intron		5	-1	134241045	803
ENSMUSG00000003662	protein_coding	Ciao1	ENSMUST00000172636	nonsense_mediated_decay		2	-1	127247620	409
ENSMUSG00000062873	protein_coding	Olfr1355	ENSMUST00000078414	protein_coding	principal1	10	1	78875540	3317
ENSMUSG00000105356	TEC	Gm42603	ENSMUST00000199893	TEC		5	1	96798207	2146
ENSMUSG00000046318	protein_coding	Ccbe1	ENSMUST00000130300	protein_coding	principal1	18	-1	66292667	6572
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000174003	retained_intron		5	-1	134244752	771
ENSMUSG00000027361	protein_coding	Gabpb1	ENSMUST00000130263	processed_transcript		2	-1	126675339	423
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000172600	retained_intron		5	-1	134243744	358
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000174182	retained_intron		5	-1	134272637	758
ENSMUSG00000027361	protein_coding	Gabpb1	ENSMUST00000124972	protein_coding		2	-1	126675352	372
ENSMUSG00000053129	protein_coding	Gsx1	ENSMUST00000065382	protein_coding	principal1	5	1	147188696	1773
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000174133	protein_coding		5	-1	134295558	1310
ENSMUSG00000027361	protein_coding	Gabpb1	ENSMUST00000137335	protein_coding		2	-1	126663290	439
ENSMUSG00000046318	protein_coding	Ccbe1	ENSMUST00000235872	protein_coding		18	-1	66076403	2137
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000201371	processed_transcript		5	-1	134259485	1329
ENSMUSG00000115711	lincRNA	Gm41336	ENSMUST00000228483	lincRNA		15	1	63740684	798
ENSMUSG00000023093	protein_coding	Pate12	ENSMUST00000041537	protein_coding	principal1	9	1	36431884	519
ENSMUSG00000046318	protein_coding	Ccbe1	ENSMUST00000236848	nonsense_mediated_decay		18	-1	66291832	712
ENSMUSG00000053198	protein_coding	Prx	ENSMUST00000098644	protein_coding	principal3	7	1	27499324	4841
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000172953	processed_transcript		5	-1	134265792	630
ENSMUSG00000098024	antisense	Gm27003	ENSMUST00000182590	antisense		2	1	126675916	497
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000173887	processed_transcript		5	-1	134275043	380
ENSMUSG00000051043	protein_coding	Gprc5c	ENSMUST00000133245	protein_coding		11	1	114851152	359
ENSMUSG00000046318	protein_coding	Ccbe1	ENSMUST00000236402	protein_coding		18	-1	66291827	1046
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000174867	protein_coding		5	-1	134314378	704
ENSMUSG00000051043	protein_coding	Gprc5c	ENSMUST00000122967	protein_coding		11	1	114851173	1709
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000174188	protein_coding		5	-1	134311727	733
ENSMUSG00000046318	protein_coding	Ccbe1	ENSMUST00000151343	processed_transcript		18	-1	66302741	1845
ENSMUSG00000053198	protein_coding	Prx	ENSMUST00000108355	protein_coding	alternative2	7	1	27499324	5433
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000173651	nonsense_mediated_decay		5	-1	134312022	818
ENSMUSG00000090710	protein_coding	Pate11	ENSMUST00000165591	protein_coding	principal1	9	1	36475638	306
ENSMUSG00000053198	protein_coding	Prx	ENSMUST00000238936	protein_coding	principal3	7	1	27499324	4841
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000036880	protein_coding	principal1	8	1	123224842	1642
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000173504	protein_coding		5	-1	134314676	950
ENSMUSG00000098949	processed_pseudogene	Gm27160	ENSMUST00000184837	processed_pseudogene		9	1	36482296	199
ENSMUSG00000058793	protein_coding	Cds2	ENSMUST00000103181	protein_coding	principal1	2	1	132263148	8396
ENSMUSG00000053198	protein_coding	Prx	ENSMUST00000125990	protein_coding		7	1	27507801	4298
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000173263	nonsense_mediated_decay		5	-1	134314727	738
ENSMUSG00000029644	protein_coding	Pdx1	ENSMUST00000085591	protein_coding	principal1	5	1	147269959	2158
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000115869	protein_coding	principal1	18	-1	7626866	4981
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000174773	retained_intron		5	-1	134306609	517
ENSMUSG00000053198	protein_coding	Prx	ENSMUST00000065487	protein_coding	alternative2	7	1	27507806	4497
ENSMUSG00000099274	processed_pseudogene	Gm27218	ENSMUST00000183745	processed_pseudogene		9	1	36537932	392
ENSMUSG00000087259	lincRNA	2610035D17Rik	ENSMUST00000136438	lincRNA		11	-1	113173077	1436
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000202343	retained_intron		5	-1	134297174	2164
ENSMUSG00000087259	lincRNA	2610035D17Rik	ENSMUST00000145206	lincRNA		11	-1	113201822	1802
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000234210	retained_intron		18	-1	7354666	4694
ENSMUSG00000087259	lincRNA	2610035D17Rik	ENSMUST00000127263	lincRNA		11	-1	113201838	1861
ENSMUSG00000041481	protein_coding	Serpina3g	ENSMUST00000171065	processed_transcript		12	1	104236245	548
ENSMUSG00000058793	protein_coding	Cds2	ENSMUST00000147456	nonsense_mediated_decay		2	1	132263241	499
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000234571	protein_coding		18	-1	7626861	1784
ENSMUSG00000028330	protein_coding	Ncbp1	ENSMUST00000030014	protein_coding	principal1	4	1	46138613	3010
ENSMUSG00000074448	protein_coding	Pate9	ENSMUST00000098900	protein_coding	principal1	9	-1	36541963	2348
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000235093	protein_coding		18	-1	7626830	3786
ENSMUSG00000087259	lincRNA	2610035D17Rik	ENSMUST00000150712	lincRNA		11	-1	113173077	947
ENSMUSG00000021377	protein_coding	Dek	ENSMUST00000021807	protein_coding	principal1	13	-1	47106190	2556
ENSMUSG00000117774	processed_pseudogene	Gm18610	ENSMUST00000237977	processed_pseudogene		19	-1	18205795	648
ENSMUSG00000028330	protein_coding	Ncbp1	ENSMUST00000131187	processed_transcript		4	1	46157901	474
ENSMUSG00000110880	unprocessed_pseudogene	Gm48431	ENSMUST00000214753	unprocessed_pseudogene		9	1	36567701	269
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000234812	protein_coding		18	-1	7626817	1258
ENSMUSG00000041481	protein_coding	Serpina3g	ENSMUST00000043315	protein_coding	principal1	12	1	104236252	1945
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000111261	protein_coding	alternative1	5	-1	134314746	4381
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000234510	nonsense_mediated_decay		18	-1	7608982	3001
ENSMUSG00000060261	protein_coding	Gtf2i	ENSMUST00000082057	protein_coding	alternative1	5	-1	134314746	4375
ENSMUSG00000021377	protein_coding	Dek	ENSMUST00000224150	nonsense_mediated_decay		13	-1	47098337	784
ENSMUSG00000028330	protein_coding	Ncbp1	ENSMUST00000133286	processed_transcript		4	1	46165196	781
ENSMUSG00000021377	protein_coding	Dek	ENSMUST00000135278	protein_coding		13	-1	47106201	744
ENSMUSG00000058793	protein_coding	Cds2	ENSMUST00000125060	protein_coding		2	1	132285176	345
ENSMUSG00000092570	antisense	Plut	ENSMUST00000174285	antisense		5	-1	147271521	1444
ENSMUSG00000041481	protein_coding	Serpina3g	ENSMUST00000171916	protein_coding		12	1	104236259	830
ENSMUSG00000058793	protein_coding	Cds2	ENSMUST00000089461	protein_coding		2	1	132285939	8073
ENSMUSG00000021377	protein_coding	Dek	ENSMUST00000129352	protein_coding		13	-1	47105830	876
ENSMUSG00000041481	protein_coding	Serpina3g	ENSMUST00000170628	protein_coding		12	1	104236260	740
ENSMUSG00000058793	protein_coding	Cds2	ENSMUST00000138194	protein_coding		2	1	132301296	627
ENSMUSG00000091248	protein_coding	Pate8	ENSMUST00000170030	protein_coding	principal1	9	-1	36582635	330
ENSMUSG00000092570	antisense	Plut	ENSMUST00000201192	antisense		5	-1	147271502	569
ENSMUSG00000021929	protein_coding	Kpna3	ENSMUST00000022496	protein_coding	principal1	14	-1	61439874	4069
ENSMUSG00000099256	processed_pseudogene	Gm27165	ENSMUST00000183951	processed_pseudogene		9	1	33931644	232
ENSMUSG00000112483	TEC	Gm48542	ENSMUST00000218845	TEC		12	-1	46811508	4557
ENSMUSG00000092570	antisense	Plut	ENSMUST00000172461	antisense		5	-1	147270995	855
ENSMUSG00000021377	protein_coding	Dek	ENSMUST00000143933	processed_transcript		13	-1	47106154	596
ENSMUSG00000112358	TEC	Gm33869	ENSMUST00000219501	TEC		12	-1	46704216	3142
ENSMUSG00000086794	processed_transcript	Gm11642	ENSMUST00000150442	processed_transcript		11	1	103723950	440
ENSMUSG00000021929	protein_coding	Kpna3	ENSMUST00000225207	retained_intron		14	-1	61373091	698
ENSMUSG00000115464	lincRNA	Gm49019	ENSMUST00000227064	lincRNA		15	1	63751659	1594
ENSMUSG00000064202	protein_coding	4430402I18Rik	ENSMUST00000025872	protein_coding		19	-1	28964154	2152
ENSMUSG00000086255	antisense	Gm11534	ENSMUST00000125956	antisense		11	1	95869154	204
ENSMUSG00000021377	protein_coding	Dek	ENSMUST00000150652	processed_transcript		13	-1	47106183	468
ENSMUSG00000115682	processed_pseudogene	Gm46499	ENSMUST00000226151	processed_pseudogene		15	1	63760161	420
ENSMUSG00000086255	antisense	Gm11534	ENSMUST00000129261	antisense		11	1	95875078	470
ENSMUSG00000064202	protein_coding	4430402I18Rik	ENSMUST00000162110	protein_coding	principal1	19	-1	28967800	1559
ENSMUSG00000064202	protein_coding	4430402I18Rik	ENSMUST00000159655	processed_transcript		19	-1	28929227	460
ENSMUSG00000037833	protein_coding	Sh2d4b	ENSMUST00000070328	protein_coding	alternative2	14	-1	40853305	3086
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000212021	processed_transcript		8	1	123224854	518
ENSMUSG00000027270	protein_coding	Lamp5	ENSMUST00000144403	protein_coding		2	1	136052239	622
ENSMUSG00000073062	protein_coding	Zxdb	ENSMUST00000101388	protein_coding	principal1	X	1	94724569	5619
ENSMUSG00000064202	protein_coding	4430402I18Rik	ENSMUST00000164777	protein_coding		19	-1	28963587	1066
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000212035	retained_intron		8	1	123224861	359
ENSMUSG00000064202	protein_coding	4430402I18Rik	ENSMUST00000160542	protein_coding		19	-1	28963587	1057
ENSMUSG00000086859	lincRNA	Snhg20	ENSMUST00000232695	lincRNA		11	1	117076008	636
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000234444	retained_intron		18	-1	7626817	1891
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000213005	protein_coding		8	1	123224866	1580
ENSMUSG00000086859	lincRNA	Snhg20	ENSMUST00000233685	lincRNA		11	1	117076464	389
ENSMUSG00000086859	lincRNA	Snhg20	ENSMUST00000232907	lincRNA		11	1	117076615	422
ENSMUSG00000064202	protein_coding	4430402I18Rik	ENSMUST00000161813	protein_coding		19	-1	28963908	384
ENSMUSG00000109459	lincRNA	Gm39526	ENSMUST00000208925	lincRNA		X	1	94731399	1413
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000234599	retained_intron		18	-1	7626854	849
ENSMUSG00000037846	protein_coding	Rtkn2	ENSMUST00000068994	nonsense_mediated_decay		10	1	67979605	3110
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000234522	processed_transcript		18	-1	7466173	609
ENSMUSG00000021047	protein_coding	Nova1	ENSMUST00000021438	protein_coding	principal1	12	-1	46818929	7154
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000234874	protein_coding		18	-1	7608971	480
ENSMUSG00000086859	lincRNA	Snhg20	ENSMUST00000149822	lincRNA		11	1	117076783	600
ENSMUSG00000086859	lincRNA	Snhg20	ENSMUST00000233355	lincRNA		11	1	117076788	1090
ENSMUSG00000086859	lincRNA	Snhg20	ENSMUST00000145438	lincRNA		11	1	117076790	459
ENSMUSG00000021047	protein_coding	Nova1	ENSMUST00000219886	protein_coding		12	-1	46720859	480
ENSMUSG00000064202	protein_coding	4430402I18Rik	ENSMUST00000179171	protein_coding		19	-1	28911879	2638
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000234639	retained_intron		18	-1	7626859	3294
ENSMUSG00000086859	lincRNA	Snhg20	ENSMUST00000182811	lincRNA		11	1	117076802	2153
ENSMUSG00000021047	protein_coding	Nova1	ENSMUST00000219330	protein_coding		12	-1	46816960	532
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000235095	retained_intron		18	-1	7626854	2873
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000234366	retained_intron		18	-1	7626866	675
ENSMUSG00000037846	protein_coding	Rtkn2	ENSMUST00000147556	nonsense_mediated_decay		10	1	67979698	4432
ENSMUSG00000098358	lincRNA	Gm27164	ENSMUST00000184359	lincRNA		9	1	33942310	723
ENSMUSG00000057440	protein_coding	Mpp7	ENSMUST00000233992	retained_intron		18	-1	7626855	4567
ENSMUSG00000112162	processed_pseudogene	Gm48758	ENSMUST00000218541	processed_pseudogene		10	-1	9588114	307
ENSMUSG00000037846	protein_coding	Rtkn2	ENSMUST00000123147	processed_transcript		10	1	68043968	546
ENSMUSG00000018486	protein_coding	Wnt9b	ENSMUST00000018630	protein_coding	principal1	11	-1	103749821	4518
ENSMUSG00000112303	lincRNA	Gm48759	ENSMUST00000217963	lincRNA		10	1	9596472	1428
ENSMUSG00000037833	protein_coding	Sh2d4b	ENSMUST00000096000	protein_coding	principal2	14	-1	40893266	1597
ENSMUSG00000021047	protein_coding	Nova1	ENSMUST00000218829	retained_intron		12	-1	46818775	1383
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000212193	nonsense_mediated_decay		8	1	123224870	1638
ENSMUSG00000037846	protein_coding	Rtkn2	ENSMUST00000118160	protein_coding	principal5	10	1	67979570	3970
ENSMUSG00000037846	protein_coding	Rtkn2	ENSMUST00000117086	protein_coding	alternative2	10	1	67979715	2246
ENSMUSG00000021047	protein_coding	Nova1	ENSMUST00000220258	processed_transcript		12	-1	46817990	571
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000212361	nonsense_mediated_decay		8	1	123224872	2498
ENSMUSG00000037833	protein_coding	Sh2d4b	ENSMUST00000225854	retained_intron		14	-1	40893266	1150
ENSMUSG00000051043	protein_coding	Gprc5c	ENSMUST00000053361	protein_coding	alternative2	11	1	114851842	3667
ENSMUSG00000027270	protein_coding	Lamp5	ENSMUST00000057503	protein_coding	principal1	2	1	136057927	1955
ENSMUSG00000112420	TEC	Gm48543	ENSMUST00000218639	TEC		12	-1	46728001	2229
ENSMUSG00000118192	processed_pseudogene	Gm50183	ENSMUST00000237767	processed_pseudogene		19	1	18480076	673
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000212028	nonsense_mediated_decay		8	1	123224887	528
ENSMUSG00000027270	protein_coding	Lamp5	ENSMUST00000154674	processed_transcript		2	1	136058252	393
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000212749	retained_intron		8	1	123225815	1054
ENSMUSG00000013418	protein_coding	B4galnt2	ENSMUST00000038343	protein_coding	principal1	11	-1	95914891	1722
ENSMUSG00000027270	protein_coding	Lamp5	ENSMUST00000143777	retained_intron		2	1	136058252	1569
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000212784	retained_intron		8	1	123226796	1379
ENSMUSG00000116048	protein_coding	Septin2	ENSMUST00000168776	protein_coding	principal1	1	1	93479061	3267
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000212497	processed_transcript		8	1	123227696	648
ENSMUSG00000027270	protein_coding	Lamp5	ENSMUST00000123436	processed_transcript		2	1	136059431	1384
ENSMUSG00000051043	protein_coding	Gprc5c	ENSMUST00000021071	protein_coding	principal3	11	1	114851850	2200
ENSMUSG00000095793	protein_coding	Gm20855	ENSMUST00000186996	protein_coding	principal1	Y	-1	35131833	924
ENSMUSG00000095793	protein_coding	Gm20855	ENSMUST00000180170	protein_coding		Y	-1	35130404	498
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000212904	retained_intron		8	1	123228865	454
ENSMUSG00000004031	protein_coding	Brinp2	ENSMUST00000195271	nonsense_mediated_decay		1	-1	158356229	4906
ENSMUSG00000033862	protein_coding	Cdk10	ENSMUST00000212532	retained_intron		8	1	123229120	676
ENSMUSG00000051043	protein_coding	Gprc5c	ENSMUST00000136785	protein_coding		11	1	114851880	988
ENSMUSG00000037846	protein_coding	Rtkn2	ENSMUST00000105437	protein_coding	alternative2	10	1	67979598	3932
ENSMUSG00000051043	protein_coding	Gprc5c	ENSMUST00000142262	protein_coding		11	1	114852319	481
ENSMUSG00000116048	protein_coding	Septin2	ENSMUST00000179353	protein_coding	principal1	1	1	93478993	3219
ENSMUSG00000086838	antisense	Gm16212	ENSMUST00000136190	antisense		10	-1	68026304	282
ENSMUSG00000051043	protein_coding	Gprc5c	ENSMUST00000152314	protein_coding		11	1	114864492	645
ENSMUSG00000086838	antisense	Gm16212	ENSMUST00000143555	antisense		10	-1	68026626	420
ENSMUSG00000111683	processed_transcript	Gm49367	ENSMUST00000216487	processed_transcript		9	-1	36692969	725
ENSMUSG00000099881	bidirectional_promoter_lncRNA	2810013P06Rik	ENSMUST00000186531	bidirectional_promoter_lncRNA		8	1	123042466	2137
ENSMUSG00000116048	protein_coding	Septin2	ENSMUST00000172165	protein_coding		1	1	93478993	3192
ENSMUSG00000035875	protein_coding	AI182371	ENSMUST00000226631	protein_coding	alternative2	2	-1	35100684	1680
ENSMUSG00000111485	processed_pseudogene	Gm48443	ENSMUST00000216568	processed_pseudogene		9	1	36672697	3841
ENSMUSG00000097384	lincRNA	Gm26815	ENSMUST00000181200	lincRNA		8	-1	121356836	3366
ENSMUSG00000051043	protein_coding	Gprc5c	ENSMUST00000177952	protein_coding	principal3	11	1	114851540	1809
ENSMUSG00000100616	lincRNA	Gm28076	ENSMUST00000188337	lincRNA		7	-1	37140382	410
ENSMUSG00000040969	protein_coding	Arhgef38	ENSMUST00000147041	protein_coding	principal1	3	-1	133234889	6541
ENSMUSG00000046108	protein_coding	Il17c	ENSMUST00000050963	protein_coding	principal1	8	1	122422020	719
ENSMUSG00000098304	bidirectional_promoter_lncRNA	1700027I24Rik	ENSMUST00000213304	bidirectional_promoter_lncRNA		9	-1	36693150	619
ENSMUSG00000040969	protein_coding	Arhgef38	ENSMUST00000161022	protein_coding		3	-1	133234889	1912
ENSMUSG00000035875	protein_coding	AI182371	ENSMUST00000134940	nonsense_mediated_decay		2	-1	35100689	1489
ENSMUSG00000066363	protein_coding	Serpina3f	ENSMUST00000121337	protein_coding	principal1	12	1	104214544	2248
ENSMUSG00000035875	protein_coding	AI182371	ENSMUST00000226375	nonsense_mediated_decay		2	-1	35100689	1724
ENSMUSG00000091707	unprocessed_pseudogene	Gm8224	ENSMUST00000166178	unprocessed_pseudogene		14	1	44307689	497
ENSMUSG00000019102	protein_coding	Aldh3a1	ENSMUST00000147792	protein_coding		11	1	61207537	361
ENSMUSG00000098304	bidirectional_promoter_lncRNA	1700027I24Rik	ENSMUST00000183612	bidirectional_promoter_lncRNA		9	-1	36693189	696
ENSMUSG00000040969	protein_coding	Arhgef38	ENSMUST00000161932	protein_coding		3	-1	133234949	1033
ENSMUSG00000020070	protein_coding	Rufy2	ENSMUST00000119567	protein_coding	principal1	10	1	62980242	4130
ENSMUSG00000066363	protein_coding	Serpina3f	ENSMUST00000101080	protein_coding	principal1	12	1	104214633	2207
ENSMUSG00000028431	protein_coding	Elp1	ENSMUST00000171411	retained_intron		4	-1	56757285	953
ENSMUSG00000034902	protein_coding	Pip5k1c	ENSMUST00000163075	protein_coding	alternative2	10	1	81292963	4208
ENSMUSG00000040969	protein_coding	Arhgef38	ENSMUST00000054105	protein_coding		3	-1	133137302	814
ENSMUSG00000091725	protein_coding	Gm8220	ENSMUST00000164663	protein_coding		14	1	44285580	1403
ENSMUSG00000091725	protein_coding	Gm8220	ENSMUST00000169601	protein_coding	principal1	14	1	44285605	525
ENSMUSG00000066363	protein_coding	Serpina3f	ENSMUST00000167049	protein_coding	principal1	12	1	104214544	2042
ENSMUSG00000091725	protein_coding	Gm8220	ENSMUST00000177877	protein_coding		14	1	44288131	381
ENSMUSG00000082776	processed_pseudogene	Gm7061	ENSMUST00000118127	processed_pseudogene		X	-1	94774034	1416
ENSMUSG00000115287	unprocessed_pseudogene	Gm49111	ENSMUST00000228513	unprocessed_pseudogene		14	-1	44275796	218
ENSMUSG00000020070	protein_coding	Rufy2	ENSMUST00000143594	nonsense_mediated_decay		10	1	62980252	4502
ENSMUSG00000115536	lincRNA	Gm32857	ENSMUST00000226371	lincRNA		14	-1	44312200	1072
ENSMUSG00000081418	processed_pseudogene	Gm14830	ENSMUST00000121899	processed_pseudogene		X	-1	94775677	700
ENSMUSG00000101862	processed_pseudogene	Gm8918	ENSMUST00000190587	processed_pseudogene		12	-1	104230003	1087
ENSMUSG00000035875	protein_coding	AI182371	ENSMUST00000226972	protein_coding	alternative2	2	-1	35100689	1642
ENSMUSG00000115618	processed_pseudogene	Gm49298	ENSMUST00000228542	processed_pseudogene		14	1	61459267	455
ENSMUSG00000020070	protein_coding	Rufy2	ENSMUST00000131718	protein_coding		10	1	62980239	2816
ENSMUSG00000118588	unprocessed_pseudogene	AC142112.1	ENSMUST00000239375	unprocessed_pseudogene		12	1	104237888	1170
ENSMUSG00000115595	processed_pseudogene	Rps12-ps2	ENSMUST00000228851	processed_pseudogene		14	-1	61467366	399
ENSMUSG00000115536	lincRNA	Gm32857	ENSMUST00000228838	lincRNA		14	-1	44315511	1418
ENSMUSG00000020070	protein_coding	Rufy2	ENSMUST00000122231	protein_coding		10	1	62980262	2664
ENSMUSG00000115536	lincRNA	Gm32857	ENSMUST00000227517	lincRNA		14	-1	44232812	811
ENSMUSG00000103590	TEC	Gm37353	ENSMUST00000194497	TEC		3	-1	32722089	313
ENSMUSG00000115160	unprocessed_pseudogene	Gm6532	ENSMUST00000226572	unprocessed_pseudogene		14	1	44265044	559
ENSMUSG00000082964	processed_pseudogene	Rpl13-ps5	ENSMUST00000117813	processed_pseudogene		X	1	94789717	630
ENSMUSG00000115065	processed_pseudogene	Gm49109	ENSMUST00000226123	processed_pseudogene		14	-1	44306443	310
ENSMUSG00000115805	unprocessed_pseudogene	Gm49110	ENSMUST00000227075	unprocessed_pseudogene		14	-1	44231161	231
ENSMUSG00000004031	protein_coding	Brinp2	ENSMUST00000004133	protein_coding	principal1	1	-1	158356326	4167
ENSMUSG00000020070	protein_coding	Rufy2	ENSMUST00000148259	retained_intron		10	1	62980223	1455
ENSMUSG00000041449	transcribed_unprocessed_pseudogene	Serpina3h	ENSMUST00000049922	processed_transcript		12	1	104247905	1239
ENSMUSG00000073060	unprocessed_pseudogene	Zxda	ENSMUST00000117281	unprocessed_pseudogene		X	-1	94798183	2621
ENSMUSG00000033530	protein_coding	Ttc7b	ENSMUST00000062957	protein_coding	principal2	12	-1	100520826	3446
ENSMUSG00000028329	protein_coding	Xpa	ENSMUST00000058232	protein_coding	alternative2	4	-1	46196311	1241
ENSMUSG00000020070	protein_coding	Rufy2	ENSMUST00000062600	nonsense_mediated_decay		10	1	62980293	1110
ENSMUSG00000041449	transcribed_unprocessed_pseudogene	Serpina3h	ENSMUST00000116393	transcribed_unprocessed_pseudogene		12	1	104250152	1226
ENSMUSG00000004031	protein_coding	Brinp2	ENSMUST00000194578	processed_transcript		1	-1	158296464	265
ENSMUSG00000035875	protein_coding	AI182371	ENSMUST00000045776	protein_coding	principal2	2	-1	35100685	1724
ENSMUSG00000115656	lincRNA	4930556J02Rik	ENSMUST00000228251	lincRNA		14	1	61492688	677
ENSMUSG00000004031	protein_coding	Brinp2	ENSMUST00000192709	retained_intron		1	-1	158356295	4022
ENSMUSG00000033530	protein_coding	Ttc7b	ENSMUST00000223020	protein_coding	alternative2	12	-1	100520691	3307
ENSMUSG00000115656	lincRNA	4930556J02Rik	ENSMUST00000227369	lincRNA		14	1	61492939	3076
ENSMUSG00000108467	TEC	Gm45211	ENSMUST00000206208	TEC		7	1	76054094	2650
ENSMUSG00000034796	protein_coding	Cpne7	ENSMUST00000134235	retained_intron		8	1	123117374	3018
ENSMUSG00000106509	processed_pseudogene	Gm43394	ENSMUST00000198671	processed_pseudogene		5	-1	59000993	694
ENSMUSG00000033530	protein_coding	Ttc7b	ENSMUST00000223110	protein_coding		12	-1	100355115	1296
ENSMUSG00000098758	lincRNA	7630403G23Rik	ENSMUST00000184229	lincRNA		9	1	34042369	1084
ENSMUSG00000035875	protein_coding	AI182371	ENSMUST00000151161	processed_transcript		2	-1	35095855	381
ENSMUSG00000028329	protein_coding	Xpa	ENSMUST00000132358	nonsense_mediated_decay		4	-1	46185649	729
ENSMUSG00000094696	processed_pseudogene	Gm6632	ENSMUST00000168425	processed_pseudogene		5	1	59053599	954
ENSMUSG00000098909	processed_pseudogene	Gm27161	ENSMUST00000183960	processed_pseudogene		9	1	34200228	562
ENSMUSG00000028329	protein_coding	Xpa	ENSMUST00000141318	processed_transcript		4	-1	46185682	577
ENSMUSG00000038080	protein_coding	Kdm1b	ENSMUST00000037025	protein_coding	principal1	13	1	47043499	4987
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000097867	processed_transcript		4	1	130047885	4574
ENSMUSG00000070313	protein_coding	Pate14	ENSMUST00000093868	protein_coding	principal2	9	-1	36638602	619
ENSMUSG00000033530	protein_coding	Ttc7b	ENSMUST00000223255	retained_intron		12	-1	100332909	695
ENSMUSG00000106467	TEC	Gm43395	ENSMUST00000198717	TEC		5	1	59079438	2240
ENSMUSG00000035875	protein_coding	AI182371	ENSMUST00000154817	processed_transcript		2	-1	35101543	626
ENSMUSG00000033530	protein_coding	Ttc7b	ENSMUST00000220480	processed_transcript		12	-1	100338296	808
ENSMUSG00000105038	processed_pseudogene	Gm43044	ENSMUST00000198091	processed_pseudogene		5	1	59511965	379
ENSMUSG00000062190	protein_coding	Lancl2	ENSMUST00000072954	protein_coding	principal1	6	1	57702540	2245
ENSMUSG00000033530	protein_coding	Ttc7b	ENSMUST00000221975	retained_intron		12	-1	100385900	677
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000106001	processed_transcript		4	1	130047909	3519
ENSMUSG00000028329	protein_coding	Xpa	ENSMUST00000030013	protein_coding	principal2	4	-1	46196311	955
ENSMUSG00000038080	protein_coding	Kdm1b	ENSMUST00000143868	protein_coding		13	1	47043570	736
ENSMUSG00000087057	antisense	Gm11730	ENSMUST00000130437	antisense		11	-1	117097067	427
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000142293	protein_coding		4	1	130047945	383
ENSMUSG00000087057	antisense	Gm11730	ENSMUST00000147186	antisense		11	-1	117097027	753
ENSMUSG00000038080	protein_coding	Kdm1b	ENSMUST00000143518	protein_coding		13	1	47063006	2969
ENSMUSG00000028329	protein_coding	Xpa	ENSMUST00000142380	protein_coding		4	-1	46196304	903
ENSMUSG00000070313	protein_coding	Pate14	ENSMUST00000184611	protein_coding	alternative2	9	-1	36638602	536
ENSMUSG00000028655	protein_coding	Mfsd2a	ENSMUST00000152308	processed_transcript		4	-1	122961152	1918
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000199808	protein_coding	principal1	5	-1	124425610	10161
ENSMUSG00000118492	processed_pseudogene	AC121143.1	ENSMUST00000238811	processed_pseudogene		1	1	187712805	231
ENSMUSG00000062190	protein_coding	Lancl2	ENSMUST00000050077	protein_coding	principal1	6	1	57702636	2509
ENSMUSG00000028329	protein_coding	Xpa	ENSMUST00000130051	processed_transcript		4	-1	46186594	259
ENSMUSG00000110925	lincRNA	Gm47858	ENSMUST00000216503	lincRNA		9	1	34459181	660
ENSMUSG00000070313	protein_coding	Pate14	ENSMUST00000184901	retained_intron		9	-1	36643376	2352
ENSMUSG00000038080	protein_coding	Kdm1b	ENSMUST00000131120	retained_intron		13	1	47064138	870
ENSMUSG00000062190	protein_coding	Lancl2	ENSMUST00000153777	nonsense_mediated_decay		6	1	57703087	1948
ENSMUSG00000103961	antisense	Gm36388	ENSMUST00000191663	antisense		1	-1	187651824	1675
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000143432	nonsense_mediated_decay		4	1	130047962	5138
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000123617	protein_coding		4	1	130055010	452
ENSMUSG00000033530	protein_coding	Ttc7b	ENSMUST00000223514	processed_transcript		12	-1	100466298	730
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000168651	protein_coding		5	-1	124414527	4170
ENSMUSG00000103577	antisense	9330162B11Rik	ENSMUST00000195397	antisense		1	-1	188008990	2212
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000154441	retained_intron		4	1	130055055	477
ENSMUSG00000041846	protein_coding	Ppp4r3a	ENSMUST00000048305	protein_coding	principal3	12	-1	101083663	4516
ENSMUSG00000103732	TEC	Gm38315	ENSMUST00000194286	TEC		1	1	188160707	2437
ENSMUSG00000038080	protein_coding	Kdm1b	ENSMUST00000128977	processed_transcript		13	1	47066458	2876
ENSMUSG00000033530	protein_coding	Ttc7b	ENSMUST00000223444	processed_transcript		12	-1	100520792	3348
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000143577	protein_coding		4	1	130055990	4037
ENSMUSG00000026610	protein_coding	Esrrg	ENSMUST00000127489	protein_coding		1	1	187608791	450
ENSMUSG00000044149	protein_coding	Nkrf	ENSMUST00000239259	protein_coding	principal1	X	-1	36903513	3882
ENSMUSG00000033530	protein_coding	Ttc7b	ENSMUST00000222036	processed_transcript		12	-1	100495406	613
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000146606	processed_transcript		4	1	130068527	717
ENSMUSG00000034850	protein_coding	Tmem127	ENSMUST00000035871	protein_coding	principal1	2	1	127247908	4811
ENSMUSG00000021376	protein_coding	Tpmt	ENSMUST00000224970	protein_coding		13	-1	47028932	338
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000151541	processed_transcript		4	1	130077043	322
ENSMUSG00000033530	protein_coding	Ttc7b	ENSMUST00000220614	retained_intron		12	-1	100520822	689
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000129937	processed_transcript		4	1	130079010	445
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000196842	retained_intron		5	-1	124384809	1061
ENSMUSG00000113864	TEC	Gm48381	ENSMUST00000222952	TEC		12	-1	100444660	3964
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000199245	retained_intron		5	-1	124386956	973
ENSMUSG00000040690	protein_coding	Col16a1	ENSMUST00000135675	processed_transcript		4	1	130097604	833
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000197228	retained_intron		5	-1	124390908	652
ENSMUSG00000034850	protein_coding	Tmem127	ENSMUST00000174503	protein_coding		2	1	127247969	627
ENSMUSG00000113917	TEC	Gm48382	ENSMUST00000220812	TEC		12	-1	100369752	3675
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000197723	retained_intron		5	-1	124392416	1512
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000071642	protein_coding	alternative2	4	1	32657119	17970
ENSMUSG00000044149	protein_coding	Nkrf	ENSMUST00000057093	protein_coding		X	-1	36902899	3264
ENSMUSG00000041846	protein_coding	Ppp4r3a	ENSMUST00000222956	retained_intron		12	-1	101048669	6009
ENSMUSG00000075335	lincRNA	4930588K23Rik	ENSMUST00000156827	lincRNA		16	1	18591992	1963
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000200474	protein_coding		5	-1	124425593	2413
ENSMUSG00000034902	protein_coding	Pip5k1c	ENSMUST00000105327	protein_coding	principal3	10	1	81292980	2551
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000151626	processed_transcript		4	1	32657183	1508
ENSMUSG00000034850	protein_coding	Tmem127	ENSMUST00000174288	protein_coding		2	1	127247973	842
ENSMUSG00000029098	protein_coding	Acox3	ENSMUST00000068947	protein_coding	principal2	5	1	35583040	3976
ENSMUSG00000113679	processed_transcript	Gm10432	ENSMUST00000223300	antisense		12	1	100276609	4791
ENSMUSG00000034796	protein_coding	Cpne7	ENSMUST00000037900	protein_coding	principal1	8	1	123117378	2398
ENSMUSG00000056770	protein_coding	Setd3	ENSMUST00000071095	protein_coding	principal1	12	-1	108179314	2755
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000198285	retained_intron		5	-1	124396257	599
ENSMUSG00000113679	processed_transcript	Gm10432	ENSMUST00000223440	lincRNA		12	1	100290256	724
ENSMUSG00000034902	protein_coding	Pip5k1c	ENSMUST00000160291	nonsense_mediated_decay		10	1	81292988	922
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000196644	protein_coding		5	-1	124426001	2511
ENSMUSG00000041846	protein_coding	Ppp4r3a	ENSMUST00000163095	protein_coding	alternative1	12	-1	101083697	4083
ENSMUSG00000034796	protein_coding	Cpne7	ENSMUST00000131659	retained_intron		8	1	123117447	3542
ENSMUSG00000081218	protein_coding	Gm4297	ENSMUST00000119285	protein_coding	principal1	X	-1	24574895	2579
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000196647	retained_intron		5	-1	124397122	1200
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000150934	processed_transcript		4	1	32722936	1875
ENSMUSG00000113679	processed_transcript	Gm10432	ENSMUST00000220721	lincRNA		12	1	100290285	1230
ENSMUSG00000029098	protein_coding	Acox3	ENSMUST00000114237	protein_coding	principal2	5	1	35583051	2956
ENSMUSG00000079267	protein_coding	Gm5930	ENSMUST00000111863	protein_coding	principal1	14	-1	44338584	1746
ENSMUSG00000034796	protein_coding	Cpne7	ENSMUST00000123191	processed_transcript		8	1	123126517	771
ENSMUSG00000079267	protein_coding	Gm5930	ENSMUST00000178002	protein_coding		14	-1	44338455	489
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000196329	protein_coding		5	-1	124425957	2100
ENSMUSG00000034796	protein_coding	Cpne7	ENSMUST00000127431	retained_intron		8	1	123128623	1983
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000133403	processed_transcript		4	1	32671550	679
ENSMUSG00000034902	protein_coding	Pip5k1c	ENSMUST00000161854	nonsense_mediated_decay		10	1	81293004	4258
ENSMUSG00000041846	protein_coding	Ppp4r3a	ENSMUST00000223459	protein_coding		12	-1	101043545	445
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000136608	processed_transcript		4	1	32695476	431
ENSMUSG00000103957	TEC	Gm10766	ENSMUST00000194123	TEC		2	-1	127270054	606
ENSMUSG00000029098	protein_coding	Acox3	ENSMUST00000156125	protein_coding		5	1	35583078	414
ENSMUSG00000103957	TEC	Gm10766	ENSMUST00000192976	TEC		2	-1	127270032	324
ENSMUSG00000098211	bidirectional_promoter_lncRNA	Gm27045	ENSMUST00000182145	bidirectional_promoter_lncRNA		8	1	121542080	1402
ENSMUSG00000056770	protein_coding	Setd3	ENSMUST00000148119	retained_intron		12	-1	108114947	3056
ENSMUSG00000103244	TEC	Gm38092	ENSMUST00000195600	TEC		8	-1	123408752	653
ENSMUSG00000037788	protein_coding	Vopp1	ENSMUST00000127485	protein_coding		6	-1	57825136	2908
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000125323	processed_transcript		4	1	32704635	546
ENSMUSG00000034902	protein_coding	Pip5k1c	ENSMUST00000045469	protein_coding	alternative2	10	1	81293005	4323
ENSMUSG00000110656	lincRNA	Gm20735	ENSMUST00000212077	lincRNA		8	-1	122451322	1979
ENSMUSG00000029098	protein_coding	Acox3	ENSMUST00000202266	protein_coding	alternative2	5	1	35583079	3501
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000199004	nonsense_mediated_decay		5	-1	124425592	5297
ENSMUSG00000041846	protein_coding	Ppp4r3a	ENSMUST00000223091	nonsense_mediated_decay		12	-1	101051406	1065
ENSMUSG00000113895	antisense	Gm48383	ENSMUST00000222411	antisense		12	1	100465039	493
ENSMUSG00000090379	protein_coding	Gm8229	ENSMUST00000168161	protein_coding	principal1	14	1	44365357	1403
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000200674	nonsense_mediated_decay		5	-1	124405729	1224
ENSMUSG00000110656	lincRNA	Gm20735	ENSMUST00000212387	lincRNA		8	-1	122451287	519
ENSMUSG00000034902	protein_coding	Pip5k1c	ENSMUST00000161719	protein_coding		10	1	81310688	649
ENSMUSG00000029098	protein_coding	Acox3	ENSMUST00000127641	retained_intron		5	1	35583092	3587
ENSMUSG00000092144	unprocessed_pseudogene	Gm3370	ENSMUST00000171785	unprocessed_pseudogene		14	1	44379870	500
ENSMUSG00000113895	antisense	Gm48383	ENSMUST00000221602	antisense		12	1	100465051	697
ENSMUSG00000056770	protein_coding	Setd3	ENSMUST00000132682	nonsense_mediated_decay		12	-1	108179227	1738
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000149941	processed_transcript		4	1	32750571	943
ENSMUSG00000056770	protein_coding	Setd3	ENSMUST00000125210	processed_transcript		12	-1	108115083	560
ENSMUSG00000089745	antisense	1810008B01Rik	ENSMUST00000162325	antisense		8	-1	124306507	829
ENSMUSG00000037788	protein_coding	Vopp1	ENSMUST00000114297	protein_coding	principal1	6	-1	57825159	2919
ENSMUSG00000034902	protein_coding	Pip5k1c	ENSMUST00000161869	nonsense_mediated_decay		10	1	81313363	679
ENSMUSG00000113895	antisense	Gm48383	ENSMUST00000221566	antisense		12	1	100465092	380
ENSMUSG00000041846	protein_coding	Ppp4r3a	ENSMUST00000223161	retained_intron		12	-1	101083702	3100
ENSMUSG00000056770	protein_coding	Setd3	ENSMUST00000109879	protein_coding		12	-1	108179216	2387
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000124361	processed_transcript		4	1	32762865	597
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000124657	processed_transcript		4	1	32725900	396
ENSMUSG00000034902	protein_coding	Pip5k1c	ENSMUST00000161586	nonsense_mediated_decay		10	1	81313498	865
ENSMUSG00000041846	protein_coding	Ppp4r3a	ENSMUST00000221912	processed_transcript		12	-1	101082917	856
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000196711	protein_coding		5	-1	124425584	772
ENSMUSG00000093923	protein_coding	Gm5935	ENSMUST00000101667	protein_coding	principal1	X	-1	24775164	875
ENSMUSG00000037788	protein_coding	Vopp1	ENSMUST00000204878	protein_coding		6	-1	57825150	769
ENSMUSG00000041846	protein_coding	Ppp4r3a	ENSMUST00000222302	retained_intron		12	-1	101083663	3455
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000138577	processed_transcript		4	1	32750571	2265
ENSMUSG00000034902	protein_coding	Pip5k1c	ENSMUST00000159895	retained_intron		10	1	81313988	897
ENSMUSG00000093923	protein_coding	Gm5935	ENSMUST00000178986	protein_coding	principal1	X	-1	24773575	639
ENSMUSG00000056770	protein_coding	Setd3	ENSMUST00000147466	nonsense_mediated_decay		12	-1	108179263	2026
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000198420	protein_coding		5	-1	124425568	599
ENSMUSG00000056770	protein_coding	Setd3	ENSMUST00000169951	processed_transcript		12	-1	108163009	156
ENSMUSG00000037788	protein_coding	Vopp1	ENSMUST00000145608	protein_coding		6	-1	57825154	4590
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000197777	protein_coding		5	-1	124419887	353
ENSMUSG00000058006	protein_coding	Mdn1	ENSMUST00000178134	protein_coding	principal2	4	1	32657119	17959
ENSMUSG00000034902	protein_coding	Pip5k1c	ENSMUST00000159636	retained_intron		10	1	81316842	810
ENSMUSG00000037788	protein_coding	Vopp1	ENSMUST00000203212	protein_coding		6	-1	57825154	429
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000197974	retained_intron		5	-1	124425542	2033
ENSMUSG00000052087	protein_coding	Rgs14	ENSMUST00000063771	protein_coding	principal1	13	1	55369732	2356
ENSMUSG00000037788	protein_coding	Vopp1	ENSMUST00000143953	processed_transcript		6	-1	57824640	375
ENSMUSG00000090230	antisense	Gm16315	ENSMUST00000163009	antisense		10	-1	81302917	783
ENSMUSG00000028328	protein_coding	Tmod1	ENSMUST00000107773	protein_coding	principal1	4	1	46038935	3158
ENSMUSG00000038095	protein_coding	Sbno1	ENSMUST00000065263	protein_coding	principal1	5	-1	124425914	10071
ENSMUSG00000056770	protein_coding	Setd3	ENSMUST00000125916	protein_coding		12	-1	108179213	636
ENSMUSG00000052087	protein_coding	Rgs14	ENSMUST00000149858	nonsense_mediated_decay		13	1	55369771	568
ENSMUSG00000103864	TEC	Gm37415	ENSMUST00000192265	TEC		5	1	124424697	2054
ENSMUSG00000103864	TEC	Gm37415	ENSMUST00000192373	TEC		5	1	124425706	551
ENSMUSG00000102261	processed_pseudogene	Gm18864	ENSMUST00000194518	processed_pseudogene		3	-1	19709320	1051
ENSMUSG00000094463	processed_pseudogene	Gm8546	ENSMUST00000178288	processed_pseudogene		13	-1	89578419	1264
ENSMUSG00000106182	processed_pseudogene	Gm7442	ENSMUST00000197778	processed_pseudogene		3	1	19768873	383
ENSMUSG00000028328	protein_coding	Tmod1	ENSMUST00000156200	protein_coding		4	1	46039209	430
ENSMUSG00000031824	protein_coding	6430548M08Rik	ENSMUST00000212474	retained_intron		8	1	120114152	1762
ENSMUSG00000028655	protein_coding	Mfsd2a	ENSMUST00000030408	protein_coding	principal1	4	-1	122961188	2151
ENSMUSG00000029098	protein_coding	Acox3	ENSMUST00000068563	protein_coding	alternative2	5	1	35583102	3386
ENSMUSG00000048106	transcribed_unprocessed_pseudogene	4632415L05Rik	ENSMUST00000198527	processed_transcript		3	1	19894886	6148
ENSMUSG00000048106	transcribed_unprocessed_pseudogene	4632415L05Rik	ENSMUST00000059704	transcribed_unprocessed_pseudogene		3	1	19894982	1028
ENSMUSG00000028655	protein_coding	Mfsd2a	ENSMUST00000138964	processed_transcript		4	-1	122959990	356
ENSMUSG00000026365	protein_coding	Cfh	ENSMUST00000192880	protein_coding		1	-1	140183280	3746
ENSMUSG00000028655	protein_coding	Mfsd2a	ENSMUST00000127047	protein_coding		4	-1	122961188	475
ENSMUSG00000116546	lincRNA	Gm49755	ENSMUST00000232290	lincRNA		16	1	30849456	1214
ENSMUSG00000029098	protein_coding	Acox3	ENSMUST00000114238	protein_coding	alternative2	5	1	35583523	2825
ENSMUSG00000116951	lincRNA	Gm49756	ENSMUST00000232259	lincRNA		16	-1	30870091	691
ENSMUSG00000116951	lincRNA	Gm49756	ENSMUST00000231571	lincRNA		16	-1	30870724	805
ENSMUSG00000029098	protein_coding	Acox3	ENSMUST00000201106	protein_coding		5	1	35604614	430
ENSMUSG00000116737	lincRNA	Gm49757	ENSMUST00000231959	lincRNA		16	1	30870191	1324
ENSMUSG00000052087	protein_coding	Rgs14	ENSMUST00000224185	retained_intron		13	1	55376982	2380
ENSMUSG00000020892	protein_coding	Aloxe3	ENSMUST00000021268	protein_coding	principal1	11	1	69125896	3019
ENSMUSG00000103781	processed_pseudogene	Gm37523	ENSMUST00000194901	processed_pseudogene		3	1	19913796	412
ENSMUSG00000029098	protein_coding	Acox3	ENSMUST00000154796	retained_intron		5	1	35606959	666
ENSMUSG00000050558	protein_coding	Prokr2	ENSMUST00000110157	protein_coding		2	-1	132385427	4005
ENSMUSG00000054484	protein_coding	Tmem62	ENSMUST00000067582	protein_coding	principal1	2	1	120977017	2921
ENSMUSG00000028328	protein_coding	Tmod1	ENSMUST00000128689	processed_transcript		4	1	46077127	1186
ENSMUSG00000036117	protein_coding	Il5	ENSMUST00000048605	protein_coding	principal1	11	1	53720794	1537
ENSMUSG00000029098	protein_coding	Acox3	ENSMUST00000201659	retained_intron		5	1	35610099	1789
ENSMUSG00000052087	protein_coding	Rgs14	ENSMUST00000135851	retained_intron		13	1	55379169	1846
ENSMUSG00000027671	protein_coding	Actl6a	ENSMUST00000194781	protein_coding		3	1	32706298	831
ENSMUSG00000028328	protein_coding	Tmod1	ENSMUST00000136553	processed_transcript		4	1	46082847	383
ENSMUSG00000049908	protein_coding	Gja8	ENSMUST00000062944	protein_coding	principal1	3	-1	96926020	6940
ENSMUSG00000116581	lincRNA	Gm46565	ENSMUST00000232280	lincRNA		16	-1	30933340	2372
ENSMUSG00000106634	lincRNA	Gm43042	ENSMUST00000198676	lincRNA		5	-1	59574242	1820
ENSMUSG00000094673	protein_coding	Olfr1354	ENSMUST00000204587	protein_coding	principal1	10	1	78913171	3781
ENSMUSG00000021613	protein_coding	Hapln1	ENSMUST00000022108	protein_coding	principal1	13	1	89539796	5715
ENSMUSG00000086595	antisense	Gm12214	ENSMUST00000151643	antisense		11	-1	53724618	417
ENSMUSG00000116581	lincRNA	Gm46565	ENSMUST00000232539	lincRNA		16	-1	30935629	2163
ENSMUSG00000026610	protein_coding	Esrrg	ENSMUST00000110939	protein_coding	alternative1	1	1	187609029	4833
ENSMUSG00000116734	processed_pseudogene	Gm8376	ENSMUST00000231634	processed_pseudogene		17	1	5939087	643
ENSMUSG00000028328	protein_coding	Tmod1	ENSMUST00000155730	processed_transcript		4	1	46100243	396
ENSMUSG00000094673	protein_coding	Olfr1354	ENSMUST00000217073	protein_coding	principal1	10	1	78913293	3792
ENSMUSG00000021613	protein_coding	Hapln1	ENSMUST00000225678	retained_intron		13	1	89584511	464
ENSMUSG00000026610	protein_coding	Esrrg	ENSMUST00000152927	processed_transcript		1	1	187609696	507
ENSMUSG00000104031	processed_pseudogene	Gm17771	ENSMUST00000194477	processed_pseudogene		3	1	19934242	1147
ENSMUSG00000094673	protein_coding	Olfr1354	ENSMUST00000075859	protein_coding	principal1	10	1	78916842	1095
ENSMUSG00000054484	protein_coding	Tmem62	ENSMUST00000139428	nonsense_mediated_decay		2	1	120977017	2605
ENSMUSG00000099946	processed_pseudogene	Gm9496	ENSMUST00000191295	processed_pseudogene		1	1	45971182	1601
ENSMUSG00000050558	protein_coding	Prokr2	ENSMUST00000049997	protein_coding	principal1	2	-1	132385400	4486
ENSMUSG00000071265	transcribed_unitary_pseudogene	1700086L19Rik	ENSMUST00000095617	transcribed_unitary_pseudogene		12	1	74284242	706
ENSMUSG00000026829	protein_coding	Gbgt1	ENSMUST00000127958	processed_transcript		2	1	28496891	632
ENSMUSG00000020892	protein_coding	Aloxe3	ENSMUST00000155324	retained_intron		11	1	69126215	4684
ENSMUSG00000070896	processed_pseudogene	Rpl23a-ps1	ENSMUST00000085632	processed_pseudogene		1	1	45981548	465
ENSMUSG00000020892	protein_coding	Aloxe3	ENSMUST00000175661	nonsense_mediated_decay		11	1	69126403	1368
ENSMUSG00000029757	protein_coding	Dync1i1	ENSMUST00000115556	protein_coding		6	1	5725639	2718
ENSMUSG00000090682	processed_pseudogene	Gm3852	ENSMUST00000182781	processed_pseudogene		1	-1	46012020	264
ENSMUSG00000071265	transcribed_unitary_pseudogene	1700086L19Rik	ENSMUST00000186463	processed_transcript		12	1	74284281	795
ENSMUSG00000054484	protein_coding	Tmem62	ENSMUST00000110686	protein_coding		2	1	120977533	2417
ENSMUSG00000050558	protein_coding	Prokr2	ENSMUST00000142766	protein_coding		2	-1	132385425	3932
ENSMUSG00000040599	protein_coding	Mis12	ENSMUST00000133413	protein_coding		11	1	71019611	344
ENSMUSG00000029757	protein_coding	Dync1i1	ENSMUST00000115555	protein_coding	alternative1	6	1	5725763	2669
ENSMUSG00000054484	protein_coding	Tmem62	ENSMUST00000123656	retained_intron		2	1	120977670	412
ENSMUSG00000020892	protein_coding	Aloxe3	ENSMUST00000176087	retained_intron		11	1	69134142	414
ENSMUSG00000071265	transcribed_unitary_pseudogene	1700086L19Rik	ENSMUST00000185822	processed_transcript		12	1	74284289	1028
ENSMUSG00000104889	processed_pseudogene	Gm43043	ENSMUST00000196579	processed_pseudogene		5	1	59777912	412
ENSMUSG00000054484	protein_coding	Tmem62	ENSMUST00000130010	processed_transcript		2	1	120981088	457
ENSMUSG00000050558	protein_coding	Prokr2	ENSMUST00000110156	protein_coding	principal1	2	-1	132385447	3829
ENSMUSG00000026610	protein_coding	Esrrg	ENSMUST00000027906	protein_coding	principal3	1	1	187997827	5293
ENSMUSG00000020892	protein_coding	Aloxe3	ENSMUST00000156874	retained_intron		11	1	69134317	454
ENSMUSG00000104563	TEC	Gm43041	ENSMUST00000200022	TEC		5	-1	59956140	2630
ENSMUSG00000054484	protein_coding	Tmem62	ENSMUST00000147347	processed_transcript		2	1	120984370	275
ENSMUSG00000040599	protein_coding	Mis12	ENSMUST00000164220	protein_coding	principal1	11	1	71019611	1416
ENSMUSG00000050558	protein_coding	Prokr2	ENSMUST00000145995	protein_coding		2	-1	132385421	345
ENSMUSG00000020892	protein_coding	Aloxe3	ENSMUST00000139257	retained_intron		11	1	69135539	638
ENSMUSG00000019102	protein_coding	Aldh3a1	ENSMUST00000108716	protein_coding	principal1	11	1	61208621	1721
ENSMUSG00000026610	protein_coding	Esrrg	ENSMUST00000110938	protein_coding	alternative1	1	1	187997868	5373
ENSMUSG00000054484	protein_coding	Tmem62	ENSMUST00000135599	retained_intron		2	1	120996274	780
ENSMUSG00000106013	lincRNA	4933402J10Rik	ENSMUST00000197579	lincRNA		5	-1	59986004	953
ENSMUSG00000026829	protein_coding	Gbgt1	ENSMUST00000028172	protein_coding	principal1	2	1	28497746	1084
ENSMUSG00000098053	lincRNA	Gm27033	ENSMUST00000183226	lincRNA		5	1	147280720	544
ENSMUSG00000103401	TEC	Gm37929	ENSMUST00000195116	TEC		1	-1	187663361	493
ENSMUSG00000106013	lincRNA	4933402J10Rik	ENSMUST00000198882	lincRNA		5	-1	59985998	1167
ENSMUSG00000019102	protein_coding	Aldh3a1	ENSMUST00000019246	protein_coding	principal1	11	1	61208745	1729
ENSMUSG00000105957	lincRNA	Gm43254	ENSMUST00000199187	lincRNA		3	-1	133310008	2491
ENSMUSG00000026829	protein_coding	Gbgt1	ENSMUST00000163121	protein_coding	principal1	2	1	28496891	1335
ENSMUSG00000105158	TEC	Gm42862	ENSMUST00000197494	TEC		5	-1	59999561	2621
ENSMUSG00000087522	processed_pseudogene	Gm371	ENSMUST00000142240	processed_pseudogene		X	-1	94998683	1245
ENSMUSG00000040599	protein_coding	Mis12	ENSMUST00000048807	protein_coding	principal1	11	1	71019611	3003
ENSMUSG00000118460	unprocessed_pseudogene	Gm50479	ENSMUST00000238414	unprocessed_pseudogene		8	1	26237222	186
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000212318	protein_coding		8	-1	104613264	586
ENSMUSG00000110075	lincRNA	Gm45305	ENSMUST00000209799	lincRNA		8	1	26242724	815
ENSMUSG00000100905	lincRNA	Gm28075	ENSMUST00000189179	lincRNA		7	1	37140541	354
ENSMUSG00000040599	protein_coding	Mis12	ENSMUST00000155236	protein_coding		11	1	71019859	340
ENSMUSG00000110417	lincRNA	Gm31727	ENSMUST00000210102	lincRNA		8	1	26266977	360
ENSMUSG00000029878	lincRNA	Dbpht2	ENSMUST00000221311	lincRNA		12	1	74296668	5341
ENSMUSG00000029878	lincRNA	Dbpht2	ENSMUST00000072100	lincRNA		12	1	74297474	2995
ENSMUSG00000084052	processed_pseudogene	Gm11745	ENSMUST00000121669	processed_pseudogene		11	1	117134598	448
ENSMUSG00000040599	protein_coding	Mis12	ENSMUST00000143762	protein_coding		11	1	71019862	531
ENSMUSG00000099715	lincRNA	Gm28077	ENSMUST00000190250	lincRNA		7	1	37299265	1635
ENSMUSG00000030156	protein_coding	Cd69	ENSMUST00000032259	protein_coding	principal2	6	-1	129275436	1687
ENSMUSG00000109682	lincRNA	Gm45307	ENSMUST00000211122	lincRNA		8	1	26298634	751
ENSMUSG00000040599	protein_coding	Mis12	ENSMUST00000136137	protein_coding		11	1	71019891	385
ENSMUSG00000106250	processed_pseudogene	Gm43392	ENSMUST00000196560	processed_pseudogene		5	-1	60025329	434
ENSMUSG00000029757	protein_coding	Dync1i1	ENSMUST00000115559	protein_coding	principal3	6	1	5725791	2599
ENSMUSG00000113031	lincRNA	Gm34552	ENSMUST00000223381	lincRNA		12	-1	74317162	636
ENSMUSG00000110229	lincRNA	Gm31784	ENSMUST00000209523	lincRNA		8	-1	26312334	1053
ENSMUSG00000106170	processed_pseudogene	Gm43393	ENSMUST00000200147	processed_pseudogene		5	-1	60025883	194
ENSMUSG00000028096	protein_coding	Gpr89	ENSMUST00000029738	protein_coding	principal1	3	-1	96905346	4598
ENSMUSG00000029757	protein_coding	Dync1i1	ENSMUST00000115554	protein_coding	alternative1	6	1	5725812	2518
ENSMUSG00000030156	protein_coding	Cd69	ENSMUST00000204411	protein_coding	alternative2	6	-1	129275366	560
ENSMUSG00000063611	lincRNA	Gm10134	ENSMUST00000238539	lincRNA		2	1	28506099	1675
ENSMUSG00000063611	lincRNA	Gm10134	ENSMUST00000074761	lincRNA		2	1	28506095	381
ENSMUSG00000113022	processed_pseudogene	Gm9544	ENSMUST00000223349	processed_pseudogene		12	1	74346341	2482
ENSMUSG00000109996	lincRNA	Gm31898	ENSMUST00000209232	lincRNA		8	-1	26435713	1540
ENSMUSG00000020823	protein_coding	Sec14l1	ENSMUST00000127090	retained_intron		11	1	117115168	3137
ENSMUSG00000106042	processed_pseudogene	Gm42861	ENSMUST00000199596	processed_pseudogene		5	-1	60176549	634
ENSMUSG00000029757	protein_coding	Dync1i1	ENSMUST00000153942	protein_coding		6	1	5725818	423
ENSMUSG00000110383	lincRNA	Gm45580	ENSMUST00000210430	lincRNA		8	1	26438829	889
ENSMUSG00000030156	protein_coding	Cd69	ENSMUST00000205190	retained_intron		6	-1	129275369	700
ENSMUSG00000029757	protein_coding	Dync1i1	ENSMUST00000204149	protein_coding		6	1	5757419	709
ENSMUSG00000024992	protein_coding	Pde6c	ENSMUST00000112329	protein_coding		19	1	38132781	2895
ENSMUSG00000113962	processed_pseudogene	Gm47618	ENSMUST00000223276	processed_pseudogene		12	-1	74594100	449
ENSMUSG00000087034	processed_pseudogene	Cbfa2t2-ps1	ENSMUST00000117165	processed_pseudogene		5	1	60231483	730
ENSMUSG00000030156	protein_coding	Cd69	ENSMUST00000205032	retained_intron		6	-1	129275369	4968
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000136730	nonsense_mediated_decay		4	-1	44167648	1617
ENSMUSG00000030156	protein_coding	Cd69	ENSMUST00000203727	retained_intron		6	-1	129275369	441
ENSMUSG00000029757	protein_coding	Dync1i1	ENSMUST00000203520	retained_intron		6	1	6006066	887
ENSMUSG00000113562	processed_pseudogene	Gm47619	ENSMUST00000222260	processed_pseudogene		12	-1	74705728	483
ENSMUSG00000106548	processed_pseudogene	Gm43390	ENSMUST00000196614	processed_pseudogene		5	1	60578630	421
ENSMUSG00000029646	protein_coding	Cdx2	ENSMUST00000031650	protein_coding	principal1	5	-1	147307270	2261
ENSMUSG00000105486	processed_pseudogene	Gm3372	ENSMUST00000198806	processed_pseudogene		5	1	60674317	1792
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000034982	protein_coding	principal3	9	1	96196304	7354
ENSMUSG00000113845	lincRNA	Gm39473	ENSMUST00000223498	lincRNA		12	1	74825345	522
ENSMUSG00000106044	TEC	Gm42860	ENSMUST00000196492	TEC		5	-1	60807706	3991
ENSMUSG00000074004	protein_coding	B3gnt6	ENSMUST00000098278	protein_coding	principal1	7	-1	98199481	2371
ENSMUSG00000012187	protein_coding	Mogat1	ENSMUST00000113524	protein_coding	principal1	1	1	78511169	1228
ENSMUSG00000113974	lincRNA	4930442G10Rik	ENSMUST00000221968	lincRNA		12	1	74842738	1096
ENSMUSG00000113974	lincRNA	4930442G10Rik	ENSMUST00000221473	lincRNA		12	1	74842753	1037
ENSMUSG00000024992	protein_coding	Pde6c	ENSMUST00000025956	protein_coding	principal1	19	1	38132946	2586
ENSMUSG00000021930	protein_coding	Spryd7	ENSMUST00000022497	protein_coding	principal1	14	-1	61556886	4002
ENSMUSG00000104775	processed_pseudogene	Gm8182	ENSMUST00000197863	processed_pseudogene		5	-1	60822427	769
ENSMUSG00000026365	protein_coding	Cfh	ENSMUST00000111977	protein_coding	alternative2	1	-1	140183320	4100
ENSMUSG00000012187	protein_coding	Mogat1	ENSMUST00000134947	protein_coding		1	1	78510991	796
ENSMUSG00000105903	lincRNA	1700014F14Rik	ENSMUST00000199566	lincRNA		5	-1	60945649	197
ENSMUSG00000027671	protein_coding	Actl6a	ENSMUST00000029214	protein_coding	principal1	3	1	32708507	2010
ENSMUSG00000012187	protein_coding	Mogat1	ENSMUST00000149732	protein_coding		1	1	78511160	799
ENSMUSG00000021930	protein_coding	Spryd7	ENSMUST00000100496	protein_coding		14	-1	61556758	1459
ENSMUSG00000012187	protein_coding	Mogat1	ENSMUST00000152111	protein_coding		1	1	78511812	397
ENSMUSG00000115802	unprocessed_pseudogene	Vmn1r-ps136	ENSMUST00000226286	unprocessed_pseudogene		14	1	61543727	382
ENSMUSG00000051682	protein_coding	Treml4	ENSMUST00000059873	protein_coding	principal3	17	1	48264295	1744
ENSMUSG00000027671	protein_coding	Actl6a	ENSMUST00000194226	retained_intron		3	1	32708550	1457
ENSMUSG00000025961	protein_coding	4933402D24Rik	ENSMUST00000027102	protein_coding	principal1	1	-1	63769267	1758
ENSMUSG00000027671	protein_coding	Actl6a	ENSMUST00000193615	nonsense_mediated_decay		3	1	32708765	635
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000111086	protein_coding	principal3	2	1	105668900	2601
ENSMUSG00000012187	protein_coding	Mogat1	ENSMUST00000125458	processed_transcript		1	1	78537628	395
ENSMUSG00000080817	processed_pseudogene	Gm13751	ENSMUST00000120280	processed_pseudogene		1	-1	63845578	752
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000111087	protein_coding	alternative1	2	1	105668900	2559
ENSMUSG00000027671	protein_coding	Actl6a	ENSMUST00000126144	protein_coding		3	1	32709164	922
ENSMUSG00000012187	protein_coding	Mogat1	ENSMUST00000012331	protein_coding	principal1	1	1	78511867	1178
ENSMUSG00000034652	protein_coding	Cd300a	ENSMUST00000106582	protein_coding	principal3	11	1	114890041	4645
ENSMUSG00000027671	protein_coding	Actl6a	ENSMUST00000135400	retained_intron		3	1	32711383	632
ENSMUSG00000058446	protein_coding	Znrf2	ENSMUST00000079869	protein_coding	principal1	6	1	54816916	5886
ENSMUSG00000108447	TEC	Gm44567	ENSMUST00000205645	TEC		7	-1	34365331	2631
ENSMUSG00000090486	protein_coding	BC035947	ENSMUST00000170511	protein_coding	principal1	1	-1	78512158	3063
ENSMUSG00000090486	protein_coding	BC035947	ENSMUST00000190853	processed_transcript		1	-1	78501165	3004
ENSMUSG00000034652	protein_coding	Cd300a	ENSMUST00000045151	protein_coding	alternative2	11	1	114890041	4633
ENSMUSG00000058446	protein_coding	Znrf2	ENSMUST00000148425	nonsense_mediated_decay		6	1	54817270	397
ENSMUSG00000026365	protein_coding	Cfh	ENSMUST00000066859	protein_coding	alternative2	1	-1	140183411	4361
ENSMUSG00000108732	TEC	2310043P16Rik	ENSMUST00000205403	TEC		7	1	34389732	3881
ENSMUSG00000058446	protein_coding	Znrf2	ENSMUST00000127331	protein_coding		6	1	54817448	574
ENSMUSG00000082684	processed_pseudogene	Gm12774	ENSMUST00000117881	processed_pseudogene		7	1	34383659	416
ENSMUSG00000027671	protein_coding	Actl6a	ENSMUST00000193231	nonsense_mediated_decay		3	1	32712172	539
ENSMUSG00000026365	protein_coding	Cfh	ENSMUST00000192919	protein_coding		1	-1	140147812	2976
ENSMUSG00000109961	lincRNA	Gm31983	ENSMUST00000210553	lincRNA		8	-1	26468840	3155
ENSMUSG00000034652	protein_coding	Cd300a	ENSMUST00000153245	processed_transcript		11	1	114890294	467
ENSMUSG00000028096	protein_coding	Gpr89	ENSMUST00000146645	processed_transcript		3	-1	96892923	3906
ENSMUSG00000109961	lincRNA	Gm31983	ENSMUST00000209999	lincRNA		8	-1	26484652	327
ENSMUSG00000110222	lincRNA	Gm39149	ENSMUST00000210258	lincRNA		8	-1	26579802	186
ENSMUSG00000028096	protein_coding	Gpr89	ENSMUST00000135533	retained_intron		3	-1	96876208	846
ENSMUSG00000026365	protein_coding	Cfh	ENSMUST00000123238	nonsense_mediated_decay		1	-1	140183322	4300
ENSMUSG00000000125	protein_coding	Wnt3	ENSMUST00000000127	protein_coding	principal1	11	1	103774150	3076
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000188008	protein_coding		9	1	96196317	1576
ENSMUSG00000107841	TEC	Gm44185	ENSMUST00000204539	TEC		6	1	54902422	3307
ENSMUSG00000090716	protein_coding	Gm3371	ENSMUST00000172103	protein_coding	principal5	14	-1	44408825	1437
ENSMUSG00000110351	lincRNA	Gm32050	ENSMUST00000209793	lincRNA		8	-1	26627480	638
ENSMUSG00000026365	protein_coding	Cfh	ENSMUST00000148225	retained_intron		1	-1	140183411	3415
ENSMUSG00000027671	protein_coding	Actl6a	ENSMUST00000153779	retained_intron		3	1	32718567	1112
ENSMUSG00000090716	protein_coding	Gm3371	ENSMUST00000177827	protein_coding	alternative2	14	-1	44410688	489
ENSMUSG00000026365	protein_coding	Cfh	ENSMUST00000194688	retained_intron		1	-1	140183764	631
ENSMUSG00000110338	lincRNA	Gm45584	ENSMUST00000211586	lincRNA		8	1	26637675	1143
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000188750	protein_coding	alternative1	9	1	96196337	1713
ENSMUSG00000109680	lincRNA	Gm32098	ENSMUST00000211305	lincRNA		8	-1	26668306	479
ENSMUSG00000028096	protein_coding	Gpr89	ENSMUST00000199586	processed_transcript		3	-1	96898547	656
ENSMUSG00000056158	protein_coding	Car10	ENSMUST00000149611	processed_transcript		11	1	93098028	303
ENSMUSG00000028096	protein_coding	Gpr89	ENSMUST00000139599	processed_transcript		3	-1	96897436	809
ENSMUSG00000116068	lincRNA	Gm49457	ENSMUST00000229807	lincRNA		15	1	72161346	1106
ENSMUSG00000026365	protein_coding	Cfh	ENSMUST00000111976	protein_coding	principal2	1	-1	140183411	4365
ENSMUSG00000109689	lincRNA	Gm45646	ENSMUST00000210983	lincRNA		8	-1	26760561	441
ENSMUSG00000116068	lincRNA	Gm49457	ENSMUST00000229045	lincRNA		15	1	72161358	922
ENSMUSG00000116068	lincRNA	Gm49457	ENSMUST00000229509	lincRNA		15	1	72161362	759
ENSMUSG00000051682	protein_coding	Treml4	ENSMUST00000154335	protein_coding	alternative2	17	1	48264337	838
ENSMUSG00000110297	processed_pseudogene	Gm45647	ENSMUST00000209789	processed_pseudogene		8	1	26780315	195
ENSMUSG00000035495	protein_coding	Tstd2	ENSMUST00000107772	protein_coding	principal1	4	-1	46138475	3726
ENSMUSG00000047720	protein_coding	Clec2m	ENSMUST00000051283	protein_coding	principal1	6	-1	129331796	1582
ENSMUSG00000028096	protein_coding	Gpr89	ENSMUST00000154750	nonsense_mediated_decay		3	-1	96905312	797
ENSMUSG00000021376	protein_coding	Tpmt	ENSMUST00000021806	protein_coding	principal1	13	-1	47043210	2708
ENSMUSG00000091569	protein_coding	Gm8232	ENSMUST00000164277	protein_coding	principal1	14	1	44433635	1402
ENSMUSG00000085421	lincRNA	4732490B19Rik	ENSMUST00000130373	lincRNA		11	-1	113209669	2446
ENSMUSG00000075543	protein_coding	Urad	ENSMUST00000100433	protein_coding	principal1	5	-1	147322440	766
ENSMUSG00000047720	protein_coding	Clec2m	ENSMUST00000203159	protein_coding		6	-1	129326696	574
ENSMUSG00000021376	protein_coding	Tpmt	ENSMUST00000110118	protein_coding		13	-1	47043124	881
ENSMUSG00000035495	protein_coding	Tstd2	ENSMUST00000107770	protein_coding	principal1	4	-1	46138438	2700
ENSMUSG00000096081	unprocessed_pseudogene	Gm21991	ENSMUST00000180006	unprocessed_pseudogene		14	1	44447792	508
ENSMUSG00000115359	lincRNA	Gm49779	ENSMUST00000227020	lincRNA		14	-1	44452387	741
ENSMUSG00000072214	protein_coding	Septin5	ENSMUST00000232653	protein_coding	alternative1	16	-1	18626471	3678
ENSMUSG00000021376	protein_coding	Tpmt	ENSMUST00000151509	protein_coding		13	-1	47041581	609
ENSMUSG00000051682	protein_coding	Treml4	ENSMUST00000136272	protein_coding	alternative2	17	1	48264337	811
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000166303	protein_coding	principal1	19	1	5473954	2634
ENSMUSG00000087223	antisense	4930442L01Rik	ENSMUST00000145865	antisense		3	-1	96832096	2077
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000185644	protein_coding	principal3	9	1	96196348	2646
ENSMUSG00000021376	protein_coding	Tpmt	ENSMUST00000136864	protein_coding		13	-1	47043343	838
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000167304	protein_coding		19	1	5473973	742
ENSMUSG00000035495	protein_coding	Tstd2	ENSMUST00000160008	retained_intron		4	-1	46138413	1547
ENSMUSG00000105385	antisense	9230114J08Rik	ENSMUST00000200375	antisense		3	-1	97000771	350
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000190709	processed_transcript		9	1	96196380	449
ENSMUSG00000021376	protein_coding	Tpmt	ENSMUST00000154802	protein_coding		13	-1	47044737	779
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000188829	protein_coding		9	1	96202156	615
ENSMUSG00000072214	protein_coding	Septin5	ENSMUST00000231244	nonsense_mediated_decay		16	-1	18629911	2003
ENSMUSG00000035495	protein_coding	Tstd2	ENSMUST00000137399	retained_intron		4	-1	46131923	463
ENSMUSG00000104766	antisense	4930573H18Rik	ENSMUST00000197696	antisense		3	-1	97092785	906
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000235523	protein_coding		19	1	5474315	2215
ENSMUSG00000072574	transcribed_unprocessed_pseudogene	Gm17184	ENSMUST00000227180	processed_transcript		14	-1	44535359	1586
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000186609	protein_coding		9	1	96258705	769
ENSMUSG00000072574	transcribed_unprocessed_pseudogene	Gm17184	ENSMUST00000111864	transcribed_unprocessed_pseudogene		14	-1	44479911	462
ENSMUSG00000021376	protein_coding	Tpmt	ENSMUST00000133100	retained_intron		13	-1	47043144	698
ENSMUSG00000035495	protein_coding	Tstd2	ENSMUST00000147837	protein_coding		4	-1	46138694	634
ENSMUSG00000072145	protein_coding	BC061237	ENSMUST00000227102	processed_transcript		14	1	44492463	1276
ENSMUSG00000003033	protein_coding	Ap1m1	ENSMUST00000003117	protein_coding	principal1	8	1	72240018	2084
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000190104	protein_coding		9	1	96258742	363
ENSMUSG00000037531	protein_coding	Mrpl47	ENSMUST00000043966	protein_coding	principal1	3	-1	32737147	3364
ENSMUSG00000057123	protein_coding	Gja5	ENSMUST00000199597	protein_coding		3	1	96904693	3668
ENSMUSG00000021376	protein_coding	Tpmt	ENSMUST00000124948	protein_coding		13	-1	47043138	315
ENSMUSG00000035495	protein_coding	Tstd2	ENSMUST00000144495	protein_coding		4	-1	46138409	506
ENSMUSG00000114376	processed_pseudogene	Gm18807	ENSMUST00000226060	processed_pseudogene		13	1	47024346	641
ENSMUSG00000072214	protein_coding	Septin5	ENSMUST00000096987	protein_coding	principal2	16	-1	18629954	2143
ENSMUSG00000035495	protein_coding	Tstd2	ENSMUST00000129929	protein_coding		4	-1	46135778	677
ENSMUSG00000003033	protein_coding	Ap1m1	ENSMUST00000212841	protein_coding		8	1	72240046	554
ENSMUSG00000035495	protein_coding	Tstd2	ENSMUST00000156021	protein_coding		4	-1	46138455	342
ENSMUSG00000091396	processed_pseudogene	Spanxn4	ENSMUST00000172433	processed_pseudogene		12	1	62687822	424
ENSMUSG00000057123	protein_coding	Gja5	ENSMUST00000132256	protein_coding		3	1	97032416	405
ENSMUSG00000114044	processed_pseudogene	Gm19134	ENSMUST00000221203	processed_pseudogene		12	-1	62690539	487
ENSMUSG00000072214	protein_coding	Septin5	ENSMUST00000231956	protein_coding		16	-1	18629939	1314
ENSMUSG00000051682	protein_coding	Treml4	ENSMUST00000125426	protein_coding	alternative2	17	1	48264341	992
ENSMUSG00000003033	protein_coding	Ap1m1	ENSMUST00000212708	nonsense_mediated_decay		8	1	72240095	491
ENSMUSG00000114078	processed_pseudogene	Tspyl-ps	ENSMUST00000220692	processed_pseudogene		12	-1	62704276	1117
ENSMUSG00000003033	protein_coding	Ap1m1	ENSMUST00000212940	nonsense_mediated_decay		8	1	72240096	421
ENSMUSG00000113590	processed_pseudogene	Gm48378	ENSMUST00000223154	processed_pseudogene		12	-1	62854063	265
ENSMUSG00000039678	protein_coding	Tbc1d13	ENSMUST00000136183	nonsense_mediated_decay		2	1	30133746	503
ENSMUSG00000057123	protein_coding	Gja5	ENSMUST00000072600	protein_coding	principal1	3	1	97032416	3109
ENSMUSG00000051682	protein_coding	Treml4	ENSMUST00000153420	protein_coding		17	1	48264373	676
ENSMUSG00000037531	protein_coding	Mrpl47	ENSMUST00000153564	processed_transcript		3	-1	32732613	523
ENSMUSG00000072214	protein_coding	Septin5	ENSMUST00000231622	protein_coding		16	-1	18629704	521
ENSMUSG00000037531	protein_coding	Mrpl47	ENSMUST00000192021	retained_intron		3	-1	32737605	1505
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000179416	protein_coding	principal3	9	1	96258742	2408
ENSMUSG00000072145	protein_coding	BC061237	ENSMUST00000096899	protein_coding	principal1	14	1	44500122	899
ENSMUSG00000051682	protein_coding	Treml4	ENSMUST00000153131	retained_intron		17	1	48272439	513
ENSMUSG00000029867	protein_coding	Llcfc1	ENSMUST00000031900	protein_coding	principal1	6	1	41684431	741
ENSMUSG00000056158	protein_coding	Car10	ENSMUST00000107859	protein_coding		11	1	93098404	1738
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000165485	protein_coding	principal1	19	1	5474688	1557
ENSMUSG00000037824	protein_coding	Tspan14	ENSMUST00000224209	protein_coding	principal1	14	-1	40934321	2477
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000189606	protein_coding		9	1	96258759	1340
ENSMUSG00000037824	protein_coding	Tspan14	ENSMUST00000224349	retained_intron		14	-1	40934316	637
ENSMUSG00000003033	protein_coding	Ap1m1	ENSMUST00000145213	protein_coding		8	1	72240110	707
ENSMUSG00000003033	protein_coding	Ap1m1	ENSMUST00000126885	protein_coding		8	1	72240323	724
ENSMUSG00000116594	protein_coding	Gm49601	ENSMUST00000231335	protein_coding	principal1	16	-1	18626427	2206
ENSMUSG00000091429	protein_coding	Gm17093	ENSMUST00000170427	protein_coding	principal1	14	1	44518276	1404
ENSMUSG00000091466	unprocessed_pseudogene	Gm17183	ENSMUST00000171170	unprocessed_pseudogene		14	1	44530797	493
ENSMUSG00000020412	protein_coding	Ascc2	ENSMUST00000070257	protein_coding	principal2	11	1	4637747	2650
ENSMUSG00000116594	protein_coding	Gm49601	ENSMUST00000231642	retained_intron		16	-1	18623640	513
ENSMUSG00000083237	processed_pseudogene	Gm11698	ENSMUST00000117948	processed_pseudogene		11	1	114908731	455
ENSMUSG00000003033	protein_coding	Ap1m1	ENSMUST00000156735	retained_intron		8	1	72252855	1066
ENSMUSG00000037824	protein_coding	Tspan14	ENSMUST00000047652	protein_coding	principal1	14	-1	40966807	2475
ENSMUSG00000056158	protein_coding	Car10	ENSMUST00000107861	protein_coding		11	1	93098404	2613
ENSMUSG00000020412	protein_coding	Ascc2	ENSMUST00000109930	protein_coding	alternative2	11	1	4637747	4844
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000166558	retained_intron		19	1	5474707	848
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000179065	protein_coding		9	1	96259253	2213
ENSMUSG00000003033	protein_coding	Ap1m1	ENSMUST00000151546	retained_intron		8	1	72252935	848
ENSMUSG00000066154	protein_coding	Mup3	ENSMUST00000107472	protein_coding	principal1	4	-1	62087289	916
ENSMUSG00000116594	protein_coding	Gm49601	ENSMUST00000231400	retained_intron		16	-1	18625211	881
ENSMUSG00000103329	TEC	Gm42492	ENSMUST00000195780	TEC		1	-1	6864151	2915
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000166253	protein_coding		19	1	5474740	882
ENSMUSG00000116594	protein_coding	Gm49601	ENSMUST00000232152	retained_intron		16	-1	18625191	734
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000167371	protein_coding		19	1	5474740	1382
ENSMUSG00000116594	protein_coding	Gm49601	ENSMUST00000231246	retained_intron		16	-1	18625729	719
ENSMUSG00000101626	lincRNA	Gm29386	ENSMUST00000191185	lincRNA		Y	-1	35193986	1500
ENSMUSG00000066154	protein_coding	Mup3	ENSMUST00000084531	protein_coding	principal1	4	-1	62087342	938
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000167855	protein_coding		19	1	5474747	607
ENSMUSG00000036760	protein_coding	Kcnk9	ENSMUST00000044624	protein_coding	principal1	15	-1	72546340	12300
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000123063	processed_transcript		2	1	105668920	983
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000165768	protein_coding	alternative1	9	1	96259285	2212
ENSMUSG00000101626	lincRNA	Gm29386	ENSMUST00000188128	lincRNA		Y	-1	35193532	438
ENSMUSG00000101626	lincRNA	Gm29386	ENSMUST00000186775	lincRNA		Y	-1	35193532	622
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000191390	retained_intron		9	1	96288357	3151
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000190689	retained_intron		9	1	96305101	3148
ENSMUSG00000066154	protein_coding	Mup3	ENSMUST00000107488	protein_coding	principal1	4	-1	62087261	984
ENSMUSG00000101091	lincRNA	Gm29384	ENSMUST00000190852	lincRNA		Y	1	35225889	2168
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000070118	protein_coding		19	1	5474750	1781
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000098098	protein_coding	principal4	4	-1	44167608	5061
ENSMUSG00000032411	protein_coding	Tfdp2	ENSMUST00000191133	protein_coding		9	1	96310566	550
ENSMUSG00000050761	protein_coding	Gp1bb	ENSMUST00000167388	protein_coding	alternative2	16	-1	18621640	1086
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000236109	retained_intron		19	1	5474752	2556
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000167920	retained_intron		19	1	5474777	463
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000236518	protein_coding		19	1	5474924	2154
ENSMUSG00000100335	lincRNA	2310008N11Rik	ENSMUST00000189978	lincRNA		8	-1	26824423	568
ENSMUSG00000100335	lincRNA	2310008N11Rik	ENSMUST00000210732	lincRNA		8	-1	26880582	601
ENSMUSG00000050761	protein_coding	Gp1bb	ENSMUST00000051160	protein_coding	principal3	16	-1	18622403	2085
ENSMUSG00000056158	protein_coding	Car10	ENSMUST00000042943	protein_coding	principal1	11	1	93098404	3293
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000169943	nonsense_mediated_decay		19	1	5475068	773
ENSMUSG00000100335	lincRNA	2310008N11Rik	ENSMUST00000210955	lincRNA		8	-1	26841999	457
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000164204	protein_coding		19	1	5475120	362
ENSMUSG00000100335	lincRNA	2310008N11Rik	ENSMUST00000211079	lincRNA		8	-1	26882695	508
ENSMUSG00000056158	protein_coding	Car10	ENSMUST00000092780	retained_intron		11	1	93099290	1885
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000167827	protein_coding		19	1	5475305	769
ENSMUSG00000100335	lincRNA	2310008N11Rik	ENSMUST00000210263	lincRNA		8	-1	26884380	422
ENSMUSG00000085404	antisense	Gm12909	ENSMUST00000134190	antisense		4	1	62088288	620
ENSMUSG00000060487	protein_coding	Samd5	ENSMUST00000100070	protein_coding	principal1	10	-1	9675208	6818
ENSMUSG00000110345	lincRNA	Gm45572	ENSMUST00000211774	lincRNA		8	1	26966434	750
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000153384	processed_transcript		4	-1	44168283	1990
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000164388	protein_coding		19	1	5480045	603
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000107836	protein_coding	alternative2	4	-1	44158943	1694
ENSMUSG00000028885	protein_coding	Smpdl3b	ENSMUST00000030709	protein_coding	principal1	4	-1	132757252	2006
ENSMUSG00000021901	protein_coding	Bap1	ENSMUST00000022458	protein_coding	principal1	14	1	31251450	3460
ENSMUSG00000024909	protein_coding	Efemp2	ENSMUST00000168330	nonsense_mediated_decay		19	1	5480123	406
ENSMUSG00000086530	antisense	Gm12910	ENSMUST00000135902	antisense		4	1	62112931	724
ENSMUSG00000060487	protein_coding	Samd5	ENSMUST00000221079	processed_transcript		10	-1	9630941	482
ENSMUSG00000112680	processed_pseudogene	Gm48760	ENSMUST00000218636	processed_pseudogene		10	1	9667676	501
ENSMUSG00000092326	unprocessed_pseudogene	Vmn1r-ps55	ENSMUST00000174634	unprocessed_pseudogene		7	1	11853957	392
ENSMUSG00000056158	protein_coding	Car10	ENSMUST00000107863	protein_coding	principal1	11	1	93099290	3334
ENSMUSG00000018442	protein_coding	Derl2	ENSMUST00000108523	protein_coding		11	-1	71019242	884
ENSMUSG00000100229	unprocessed_pseudogene	Gm21896	ENSMUST00000186520	unprocessed_pseudogene		Y	1	35235339	696
ENSMUSG00000021901	protein_coding	Bap1	ENSMUST00000188714	retained_intron		14	1	31251503	444
ENSMUSG00000056158	protein_coding	Car10	ENSMUST00000107858	protein_coding		11	1	93098414	2742
ENSMUSG00000039678	protein_coding	Tbc1d13	ENSMUST00000044556	protein_coding	principal1	2	1	30133746	3595
ENSMUSG00000026707	protein_coding	Nsun6	ENSMUST00000028034	protein_coding	principal3	2	-1	15049280	2897
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000142772	protein_coding		2	1	105668935	528
ENSMUSG00000039678	protein_coding	Tbc1d13	ENSMUST00000150879	retained_intron		2	1	30133772	497
ENSMUSG00000038298	protein_coding	Pdzk1	ENSMUST00000135031	protein_coding		3	1	96829284	495
ENSMUSG00000087605	sense_intronic	Gm15742	ENSMUST00000123905	sense_intronic		16	-1	30973518	659
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000111088	protein_coding		2	1	105671860	4427
ENSMUSG00000021901	protein_coding	Bap1	ENSMUST00000189834	retained_intron		14	1	31251511	674
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000147923	processed_transcript		2	1	105673963	834
ENSMUSG00000018442	protein_coding	Derl2	ENSMUST00000143850	protein_coding	principal1	11	-1	71019303	3666
ENSMUSG00000036908	protein_coding	Unc93b1	ENSMUST00000162708	protein_coding	principal3	19	1	3935186	2266
ENSMUSG00000026707	protein_coding	Nsun6	ENSMUST00000195749	protein_coding	principal3	2	-1	15054884	3149
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000172990	processed_transcript		2	1	105675109	608
ENSMUSG00000039678	protein_coding	Tbc1d13	ENSMUST00000125142	processed_transcript		2	1	30133791	412
ENSMUSG00000018442	protein_coding	Derl2	ENSMUST00000171041	protein_coding		11	-1	71019841	1466
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000153639	retained_intron		2	1	105675191	538
ENSMUSG00000039678	protein_coding	Tbc1d13	ENSMUST00000131261	nonsense_mediated_decay		2	1	30133806	369
ENSMUSG00000021901	protein_coding	Bap1	ENSMUST00000190788	retained_intron		14	1	31251538	3855
ENSMUSG00000047434	protein_coding	Xxylt1	ENSMUST00000055389	protein_coding	principal1	16	-1	31081432	3470
ENSMUSG00000018442	protein_coding	Derl2	ENSMUST00000018586	nonsense_mediated_decay		11	-1	71019269	629
ENSMUSG00000036908	protein_coding	Unc93b1	ENSMUST00000162193	retained_intron		19	1	3935226	747
ENSMUSG00000039678	protein_coding	Tbc1d13	ENSMUST00000134013	processed_transcript		2	1	30133821	501
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000155117	retained_intron		10	-1	77370241	451
ENSMUSG00000028431	protein_coding	Elp1	ENSMUST00000030140	protein_coding	principal1	4	-1	56802331	6160
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000090397	protein_coding	alternative1	2	1	105675191	3069
ENSMUSG00000021901	protein_coding	Bap1	ENSMUST00000188453	nonsense_mediated_decay		14	1	31251580	814
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000102934	protein_coding	alternative2	4	-1	44167951	5240
ENSMUSG00000018442	protein_coding	Derl2	ENSMUST00000140712	retained_intron		11	-1	71019243	4369
ENSMUSG00000039678	protein_coding	Tbc1d13	ENSMUST00000129789	processed_transcript		2	1	30137030	599
ENSMUSG00000026707	protein_coding	Nsun6	ENSMUST00000114715	protein_coding	alternative2	2	-1	15054873	1582
ENSMUSG00000039678	protein_coding	Tbc1d13	ENSMUST00000132324	retained_intron		2	1	30142279	570
ENSMUSG00000036908	protein_coding	Unc93b1	ENSMUST00000236920	protein_coding		19	1	3935286	412
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000111085	protein_coding	principal3	2	1	105675433	2779
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000137194	processed_transcript		4	-1	44167535	546
ENSMUSG00000021901	protein_coding	Bap1	ENSMUST00000187156	nonsense_mediated_decay		14	1	31256269	621
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000108231	protein_coding		7	1	29303951	2040
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000152216	processed_transcript		4	-1	44139666	561
ENSMUSG00000036908	protein_coding	Unc93b1	ENSMUST00000237112	retained_intron		19	1	3936079	383
ENSMUSG00000021901	protein_coding	Bap1	ENSMUST00000185987	retained_intron		14	1	31256539	606
ENSMUSG00000036908	protein_coding	Unc93b1	ENSMUST00000237030	protein_coding		19	1	3941537	786
ENSMUSG00000026707	protein_coding	Nsun6	ENSMUST00000191911	retained_intron		2	-1	15049312	2420
ENSMUSG00000047434	protein_coding	Xxylt1	ENSMUST00000140566	processed_transcript		16	-1	31061427	656
ENSMUSG00000026707	protein_coding	Nsun6	ENSMUST00000192769	processed_transcript		2	-1	15049279	368
ENSMUSG00000021901	protein_coding	Bap1	ENSMUST00000185700	retained_intron		14	1	31257491	1110
ENSMUSG00000036908	protein_coding	Unc93b1	ENSMUST00000161415	retained_intron		19	1	3942440	1668
ENSMUSG00000018442	protein_coding	Derl2	ENSMUST00000132198	nonsense_mediated_decay		11	-1	71019275	676
ENSMUSG00000026707	protein_coding	Nsun6	ENSMUST00000194429	retained_intron		2	-1	15055069	438
ENSMUSG00000106939	processed_pseudogene	Gm29778	ENSMUST00000201667	processed_pseudogene		5	-1	147326334	466
ENSMUSG00000047434	protein_coding	Xxylt1	ENSMUST00000153859	processed_transcript		16	-1	31069826	407
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000111083	protein_coding	alternative1	2	1	105675527	2370
ENSMUSG00000018442	protein_coding	Derl2	ENSMUST00000131340	nonsense_mediated_decay		11	-1	71019212	491
ENSMUSG00000026707	protein_coding	Nsun6	ENSMUST00000114713	protein_coding		2	-1	15049312	2420
ENSMUSG00000047434	protein_coding	Xxylt1	ENSMUST00000142870	processed_transcript		16	-1	31067853	365
ENSMUSG00000117434	bidirectional_promoter_lncRNA	1810014P07Rik	ENSMUST00000234637	bidirectional_promoter_lncRNA		17	1	29717072	2082
ENSMUSG00000028431	protein_coding	Elp1	ENSMUST00000150002	retained_intron		4	-1	56763330	1841
ENSMUSG00000042842	protein_coding	Serpinb6b	ENSMUST00000110293	protein_coding	principal1	13	1	32965209	2193
ENSMUSG00000028431	protein_coding	Elp1	ENSMUST00000139445	retained_intron		4	-1	56758391	846
ENSMUSG00000026707	protein_coding	Nsun6	ENSMUST00000076435	protein_coding	principal3	2	-1	15054872	3042
ENSMUSG00000036908	protein_coding	Unc93b1	ENSMUST00000165711	protein_coding	alternative2	19	1	3935186	1991
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000090391	protein_coding	principal3	2	1	105676128	2869
ENSMUSG00000066568	protein_coding	Lsm14a	ENSMUST00000085585	protein_coding	principal1	7	-1	34389687	2944
ENSMUSG00000101094	unprocessed_pseudogene	Gm29533	ENSMUST00000190403	unprocessed_pseudogene		Y	-1	9377672	615
ENSMUSG00000103778	TEC	Gm36930	ENSMUST00000195431	TEC		2	-1	15034176	2376
ENSMUSG00000028431	protein_coding	Elp1	ENSMUST00000140595	retained_intron		4	-1	56772616	680
ENSMUSG00000096971	processed_transcript	4930556M19Rik	ENSMUST00000180604	bidirectional_promoter_lncRNA		15	1	10714836	2468
ENSMUSG00000101647	processed_pseudogene	Gm29534	ENSMUST00000187328	processed_pseudogene		Y	-1	9387479	382
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000049977	protein_coding	principal2	7	1	29303976	2309
ENSMUSG00000028431	protein_coding	Elp1	ENSMUST00000126441	retained_intron		4	-1	56779739	571
ENSMUSG00000042842	protein_coding	Serpinb6b	ENSMUST00000017184	nonsense_mediated_decay		13	1	32965444	1960
ENSMUSG00000066568	protein_coding	Lsm14a	ENSMUST00000206830	protein_coding		7	-1	34353495	1646
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000145378	processed_transcript		4	-1	44139586	840
ENSMUSG00000038298	protein_coding	Pdzk1	ENSMUST00000138014	protein_coding		3	1	96829463	622
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000196745	protein_coding	principal1	3	1	55242364	7962
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000148869	processed_transcript		4	-1	44138952	848
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000108230	protein_coding		7	1	29307924	1553
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000111082	protein_coding	alternative1	2	1	105676129	3116
ENSMUSG00000096971	processed_transcript	4930556M19Rik	ENSMUST00000226304	bidirectional_promoter_lncRNA		15	1	10714839	1146
ENSMUSG00000096223	protein_coding	Gm21874	ENSMUST00000190315	protein_coding	principal1	Y	-1	9416148	1538
ENSMUSG00000096223	protein_coding	Gm21874	ENSMUST00000178374	protein_coding	principal1	Y	-1	9414341	699
ENSMUSG00000042842	protein_coding	Serpinb6b	ENSMUST00000164541	protein_coding		13	1	32965503	1719
ENSMUSG00000096971	processed_transcript	4930556M19Rik	ENSMUST00000226989	bidirectional_promoter_lncRNA		15	1	10714878	388
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000143337	protein_coding		4	-1	44168005	1028
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000156216	protein_coding		2	1	105678391	1635
ENSMUSG00000032412	protein_coding	Atp1b3	ENSMUST00000034983	protein_coding	principal1	9	-1	96364442	1994
ENSMUSG00000101737	unprocessed_pseudogene	Gm28849	ENSMUST00000188127	unprocessed_pseudogene		Y	-1	9430932	174
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000129621	processed_transcript		4	-1	44167922	649
ENSMUSG00000042842	protein_coding	Serpinb6b	ENSMUST00000222967	retained_intron		13	1	32971498	306
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000147302	processed_transcript		4	-1	44167492	255
ENSMUSG00000100752	unprocessed_pseudogene	Gm28847	ENSMUST00000186778	unprocessed_pseudogene		Y	-1	9452286	700
ENSMUSG00000096971	processed_transcript	4930556M19Rik	ENSMUST00000227872	retained_intron		15	1	10714884	1029
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000128426	protein_coding		4	-1	44168287	792
ENSMUSG00000066568	protein_coding	Lsm14a	ENSMUST00000206388	nonsense_mediated_decay		7	-1	34393315	1598
ENSMUSG00000039851	protein_coding	4932438H23Rik	ENSMUST00000035689	protein_coding	principal1	16	-1	91069145	2684
ENSMUSG00000100463	unprocessed_pseudogene	Gm28848	ENSMUST00000189984	unprocessed_pseudogene		Y	-1	9477366	168
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000123844	processed_transcript		4	-1	44228312	547
ENSMUSG00000101977	unprocessed_pseudogene	Gm28846	ENSMUST00000189161	unprocessed_pseudogene		Y	1	9494691	368
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000153116	processed_transcript		4	-1	44233789	588
ENSMUSG00000039851	protein_coding	4932438H23Rik	ENSMUST00000114076	protein_coding	principal1	16	-1	91069145	2436
ENSMUSG00000066568	protein_coding	Lsm14a	ENSMUST00000205519	nonsense_mediated_decay		7	-1	34371140	647
ENSMUSG00000100661	unprocessed_pseudogene	Gm29471	ENSMUST00000190527	unprocessed_pseudogene		Y	1	9552436	700
ENSMUSG00000096971	processed_transcript	4930556M19Rik	ENSMUST00000228061	bidirectional_promoter_lncRNA		15	1	10714900	2257
ENSMUSG00000066568	protein_coding	Lsm14a	ENSMUST00000205455	retained_intron		7	-1	34353556	889
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000145760	protein_coding		4	-1	44168252	753
ENSMUSG00000032412	protein_coding	Atp1b3	ENSMUST00000190045	retained_intron		9	-1	96343581	541
ENSMUSG00000066568	protein_coding	Lsm14a	ENSMUST00000155256	protein_coding		7	-1	34389479	864
ENSMUSG00000096971	processed_transcript	4930556M19Rik	ENSMUST00000181739	retained_intron		15	1	10717851	2787
ENSMUSG00000039851	protein_coding	4932438H23Rik	ENSMUST00000146047	protein_coding		16	-1	91095122	600
ENSMUSG00000032412	protein_coding	Atp1b3	ENSMUST00000187341	processed_transcript		9	-1	96349376	278
ENSMUSG00000066568	protein_coding	Lsm14a	ENSMUST00000133046	protein_coding		7	-1	34389080	821
ENSMUSG00000082453	processed_pseudogene	Gm11502	ENSMUST00000120917	processed_pseudogene		11	1	93650759	1211
ENSMUSG00000103788	TEC	Gm37527	ENSMUST00000192406	TEC		6	-1	41696186	3547
ENSMUSG00000035696	protein_coding	Rnf38	ENSMUST00000045793	protein_coding	alternative2	4	-1	44168339	5012
ENSMUSG00000027673	protein_coding	Ndufb5	ENSMUST00000127477	protein_coding	principal1	3	1	32736990	1079
ENSMUSG00000066568	protein_coding	Lsm14a	ENSMUST00000206715	retained_intron		7	-1	34389161	2580
ENSMUSG00000085398	antisense	4931406G06Rik	ENSMUST00000147848	antisense		16	1	91044656	1252
ENSMUSG00000020832	protein_coding	Eral1	ENSMUST00000021183	protein_coding	principal1	11	-1	78080383	2014
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000167204	protein_coding		3	1	55242526	6025
ENSMUSG00000117489	lincRNA	Gm50016	ENSMUST00000234919	lincRNA		17	-1	29819387	464
ENSMUSG00000086184	antisense	Gm12764	ENSMUST00000145961	antisense		7	1	34388665	617
ENSMUSG00000027673	protein_coding	Ndufb5	ENSMUST00000121778	protein_coding		3	1	32737071	574
ENSMUSG00000079092	protein_coding	Prl2c2	ENSMUST00000110594	protein_coding	principal1	13	-1	13005383	842
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000200348	protein_coding		3	1	55247071	413
ENSMUSG00000106370	processed_pseudogene	Gm43382	ENSMUST00000198954	processed_pseudogene		5	-1	61338733	838
ENSMUSG00000032807	protein_coding	Alox12b	ENSMUST00000036424	protein_coding	principal1	11	1	69156989	2431
ENSMUSG00000038807	protein_coding	Rap1gap2	ENSMUST00000102521	protein_coding	principal2	11	-1	74590186	6565
ENSMUSG00000027673	protein_coding	Ndufb5	ENSMUST00000195565	retained_intron		3	1	32737076	3127
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000198154	retained_intron		3	1	55247279	775
ENSMUSG00000079092	protein_coding	Prl2c2	ENSMUST00000223124	retained_intron		13	-1	12997575	577
ENSMUSG00000028483	protein_coding	Snapc3	ENSMUST00000160742	processed_transcript		4	1	83453954	395
ENSMUSG00000104385	processed_pseudogene	Gm7449	ENSMUST00000194393	processed_pseudogene		1	1	6910560	663
ENSMUSG00000039542	protein_coding	Ncam1	ENSMUST00000193547	protein_coding	principal4	9	-1	49798925	6050
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000138993	retained_intron		7	1	29308012	1638
ENSMUSG00000110443	processed_pseudogene	Gm39197	ENSMUST00000212069	processed_pseudogene		8	-1	72284154	457
ENSMUSG00000079092	protein_coding	Prl2c2	ENSMUST00000221612	protein_coding		13	-1	13005334	596
ENSMUSG00000031635	protein_coding	Anxa10	ENSMUST00000034052	protein_coding	principal1	8	-1	62123116	1763
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000197870	processed_transcript		3	1	55354134	557
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000065181	protein_coding	alternative1	7	1	29308012	1574
ENSMUSG00000027673	protein_coding	Ndufb5	ENSMUST00000029217	nonsense_mediated_decay		3	1	32737106	799
ENSMUSG00000079092	protein_coding	Prl2c2	ENSMUST00000220558	protein_coding		13	-1	13005203	467
ENSMUSG00000039542	protein_coding	Ncam1	ENSMUST00000194252	protein_coding		9	-1	49568549	6564
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000198757	retained_intron		3	1	55450973	1402
ENSMUSG00000027673	protein_coding	Ndufb5	ENSMUST00000156174	nonsense_mediated_decay		3	1	32737107	353
ENSMUSG00000079092	protein_coding	Prl2c2	ENSMUST00000221627	protein_coding		13	-1	13005363	191
ENSMUSG00000038807	protein_coding	Rap1gap2	ENSMUST00000123440	processed_transcript		11	-1	74408025	5120
ENSMUSG00000039542	protein_coding	Ncam1	ENSMUST00000166811	protein_coding	alternative2	9	-1	49798872	3088
ENSMUSG00000070713	protein_coding	Gm10282	ENSMUST00000075602	protein_coding	principal1	8	-1	72305260	1151
ENSMUSG00000109762	processed_pseudogene	Gm34779	ENSMUST00000210036	processed_pseudogene		7	1	11866593	263
ENSMUSG00000029119	protein_coding	Man2b2	ENSMUST00000031002	protein_coding	principal1	5	-1	36830653	3330
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000154222	processed_transcript		7	1	29308018	3135
ENSMUSG00000027673	protein_coding	Ndufb5	ENSMUST00000154257	protein_coding		3	1	32737127	910
ENSMUSG00000038807	protein_coding	Rap1gap2	ENSMUST00000238457	protein_coding	alternative2	11	-1	74610915	6389
ENSMUSG00000106990	TEC	Gm42547	ENSMUST00000201159	TEC		6	-1	28214805	3798
ENSMUSG00000102135	processed_pseudogene	Gm37108	ENSMUST00000194605	processed_pseudogene		1	1	6916559	626
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000137848	protein_coding		7	1	29309513	428
ENSMUSG00000039542	protein_coding	Ncam1	ENSMUST00000114476	protein_coding	alternative2	9	-1	49798890	2567
ENSMUSG00000020832	protein_coding	Eral1	ENSMUST00000139731	retained_intron		11	-1	78080383	2131
ENSMUSG00000027673	protein_coding	Ndufb5	ENSMUST00000139593	protein_coding		3	1	32741595	583
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000126169	processed_transcript		7	1	29309606	366
ENSMUSG00000020832	protein_coding	Eral1	ENSMUST00000135154	retained_intron		11	-1	78075971	596
ENSMUSG00000038807	protein_coding	Rap1gap2	ENSMUST00000047488	nonsense_mediated_decay		11	-1	74610915	6382
ENSMUSG00000027673	protein_coding	Ndufb5	ENSMUST00000122290	protein_coding		3	1	32744756	625
ENSMUSG00000101164	transcribed_unprocessed_pseudogene	Gm29218	ENSMUST00000191419	processed_transcript		Y	1	67917874	1136
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000199585	protein_coding		3	1	55461728	5196
ENSMUSG00000033016	protein_coding	Nfatc1	ENSMUST00000236310	protein_coding	alternative2	18	-1	80708173	4315
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000142958	protein_coding		7	1	29312855	438
ENSMUSG00000039542	protein_coding	Ncam1	ENSMUST00000194844	protein_coding		9	-1	49543030	146
ENSMUSG00000031635	protein_coding	Anxa10	ENSMUST00000034054	protein_coding		8	-1	62123118	1222
ENSMUSG00000058799	protein_coding	Nap1l1	ENSMUST00000065917	protein_coding	principal2	10	1	111473223	1486
ENSMUSG00000114569	lincRNA	Gm35215	ENSMUST00000223733	lincRNA		13	-1	98945916	1660
ENSMUSG00000039542	protein_coding	Ncam1	ENSMUST00000192584	protein_coding		9	-1	49798758	2525
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000128145	retained_intron		7	1	29314143	538
ENSMUSG00000004207	protein_coding	Psap	ENSMUST00000105465	protein_coding	alternative2	10	1	60277627	2646
ENSMUSG00000038807	protein_coding	Rap1gap2	ENSMUST00000208896	protein_coding		11	-1	74522751	764
ENSMUSG00000030584	protein_coding	Dpf1	ENSMUST00000207677	retained_intron		7	1	29315063	3181
ENSMUSG00000114873	processed_pseudogene	Gm47052	ENSMUST00000224868	processed_pseudogene		13	1	98973378	365
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000198412	protein_coding		3	1	55461899	4282
ENSMUSG00000038807	protein_coding	Rap1gap2	ENSMUST00000145524	protein_coding		11	-1	74590124	450
ENSMUSG00000029119	protein_coding	Man2b2	ENSMUST00000147893	protein_coding		5	-1	36812963	445
ENSMUSG00000039542	protein_coding	Ncam1	ENSMUST00000217121	processed_transcript		9	-1	49798922	914
ENSMUSG00000109351	antisense	Gm44632	ENSMUST00000207245	antisense		7	-1	29319402	474
ENSMUSG00000031635	protein_coding	Anxa10	ENSMUST00000210799	retained_intron		8	-1	62123150	1225
ENSMUSG00000029119	protein_coding	Man2b2	ENSMUST00000124711	protein_coding		5	-1	36817684	1725
ENSMUSG00000038827	protein_coding	Abitram	ENSMUST00000045368	protein_coding	principal1	4	1	56802349	4275
ENSMUSG00000094080	protein_coding	Olfr8	ENSMUST00000214952	protein_coding	principal1	10	1	78950636	3407
ENSMUSG00000028483	protein_coding	Snapc3	ENSMUST00000159518	processed_transcript		4	1	83453806	911
ENSMUSG00000058799	protein_coding	Nap1l1	ENSMUST00000219961	protein_coding	alternative1	10	1	111473227	1512
ENSMUSG00000055148	protein_coding	Klf2	ENSMUST00000067912	protein_coding	principal1	8	1	72319033	1847
ENSMUSG00000094080	protein_coding	Olfr8	ENSMUST00000216819	processed_transcript		10	1	78950636	2762
ENSMUSG00000083986	processed_pseudogene	Gm12213	ENSMUST00000119924	processed_pseudogene		11	1	53733579	353
ENSMUSG00000031824	protein_coding	6430548M08Rik	ENSMUST00000034281	protein_coding	principal3	8	1	120114152	5564
ENSMUSG00000101164	transcribed_unprocessed_pseudogene	Gm29218	ENSMUST00000191168	processed_transcript		Y	1	67917931	543
ENSMUSG00000058799	protein_coding	Nap1l1	ENSMUST00000217908	protein_coding	principal2	10	1	111473242	1350
ENSMUSG00000094080	protein_coding	Olfr8	ENSMUST00000203851	protein_coding	principal1	10	1	78950662	1009
ENSMUSG00000101164	transcribed_unprocessed_pseudogene	Gm29218	ENSMUST00000186953	processed_transcript		Y	1	67917954	202
ENSMUSG00000103282	processed_pseudogene	Gm37275	ENSMUST00000191703	processed_pseudogene		1	1	6929759	30
ENSMUSG00000101164	transcribed_unprocessed_pseudogene	Gm29218	ENSMUST00000190846	transcribed_unprocessed_pseudogene		Y	1	67919462	615
ENSMUSG00000034402	protein_coding	Kcnh5	ENSMUST00000042299	protein_coding	principal1	12	-1	75177332	4058
ENSMUSG00000094080	protein_coding	Olfr8	ENSMUST00000081571	protein_coding	principal1	10	1	78955207	933
ENSMUSG00000058799	protein_coding	Nap1l1	ENSMUST00000219143	protein_coding		10	1	111473281	1365
ENSMUSG00000050052	protein_coding	Tdrp	ENSMUST00000062613	protein_coding	principal1	8	-1	13974777	2463
ENSMUSG00000079564	antisense	Gm11149	ENSMUST00000216483	antisense		9	1	49518288	1275
ENSMUSG00000078500	protein_coding	Zfp986	ENSMUST00000123460	protein_coding		4	1	145868794	1427
ENSMUSG00000105675	processed_pseudogene	Gm43383	ENSMUST00000195981	processed_pseudogene		5	-1	61603038	469
ENSMUSG00000078500	protein_coding	Zfp986	ENSMUST00000166629	protein_coding	principal1	4	1	145899900	63
ENSMUSG00000079564	antisense	Gm11149	ENSMUST00000215465	antisense		9	1	49518318	805
ENSMUSG00000102534	processed_pseudogene	Gm37225	ENSMUST00000193423	processed_pseudogene		1	1	6998217	325
ENSMUSG00000105573	processed_pseudogene	Gm43384	ENSMUST00000200569	processed_pseudogene		5	-1	61717666	637
ENSMUSG00000032127	protein_coding	Vps11	ENSMUST00000034644	protein_coding	principal1	9	-1	44361670	3536
ENSMUSG00000102213	processed_pseudogene	Gm37489	ENSMUST00000191883	processed_pseudogene		1	1	7013762	159
ENSMUSG00000086443	processed_transcript	4933421A08Rik	ENSMUST00000135313	processed_transcript		4	1	122961309	1638
ENSMUSG00000101164	transcribed_unprocessed_pseudogene	Gm29218	ENSMUST00000190454	processed_transcript		Y	1	67919899	229
ENSMUSG00000050052	protein_coding	Tdrp	ENSMUST00000194703	processed_transcript		8	-1	13953387	455
ENSMUSG00000101164	transcribed_unprocessed_pseudogene	Gm29218	ENSMUST00000185344	processed_transcript		Y	1	67919899	542
ENSMUSG00000101164	transcribed_unprocessed_pseudogene	Gm29218	ENSMUST00000189610	processed_transcript		Y	1	67919899	324
ENSMUSG00000031824	protein_coding	6430548M08Rik	ENSMUST00000108951	protein_coding	alternative2	8	1	120114153	5531
ENSMUSG00000048236	protein_coding	Ovch2	ENSMUST00000106755	protein_coding	principal1	7	-1	107801208	1953
ENSMUSG00000079564	antisense	Gm11149	ENSMUST00000068730	antisense		9	1	49518336	1250
ENSMUSG00000107102	antisense	Gm42726	ENSMUST00000202274	antisense		5	-1	65591440	1286
ENSMUSG00000050052	protein_coding	Tdrp	ENSMUST00000193921	processed_transcript		8	-1	13961972	722
ENSMUSG00000101164	transcribed_unprocessed_pseudogene	Gm29218	ENSMUST00000191342	processed_transcript		Y	1	67919901	138
ENSMUSG00000079564	antisense	Gm11149	ENSMUST00000215070	antisense		9	1	49520199	1169
ENSMUSG00000037351	protein_coding	Actr1b	ENSMUST00000043951	protein_coding	principal1	1	-1	36710008	3248
ENSMUSG00000089992	protein_coding	G6pd2	ENSMUST00000053876	protein_coding	principal1	5	1	61808816	2348
ENSMUSG00000058799	protein_coding	Nap1l1	ENSMUST00000218828	protein_coding	principal2	10	1	111480617	3934
ENSMUSG00000031824	protein_coding	6430548M08Rik	ENSMUST00000132229	protein_coding		8	1	120144463	433
ENSMUSG00000050052	protein_coding	Tdrp	ENSMUST00000210414	protein_coding		8	-1	13974693	323
ENSMUSG00000103629	processed_pseudogene	Gm5694	ENSMUST00000195648	processed_pseudogene		1	1	7035915	641
ENSMUSG00000106530	processed_pseudogene	Gm42430	ENSMUST00000197209	processed_pseudogene		5	1	62004220	616
ENSMUSG00000037351	protein_coding	Actr1b	ENSMUST00000159675	retained_intron		1	-1	36701651	327
ENSMUSG00000031824	protein_coding	6430548M08Rik	ENSMUST00000153725	protein_coding		8	1	120144704	905
ENSMUSG00000109402	antisense	Gm45040	ENSMUST00000207742	antisense		7	1	107780914	578
ENSMUSG00000105285	TEC	Gm43238	ENSMUST00000196463	TEC		5	1	62428719	359
ENSMUSG00000050052	protein_coding	Tdrp	ENSMUST00000145695	protein_coding		8	-1	13975032	373
ENSMUSG00000058799	protein_coding	Nap1l1	ENSMUST00000218982	retained_intron		10	1	111490845	486
ENSMUSG00000109402	antisense	Gm45040	ENSMUST00000208448	antisense		7	1	107780939	602
ENSMUSG00000050052	protein_coding	Tdrp	ENSMUST00000119182	retained_intron		8	-1	13974743	2128
ENSMUSG00000038827	protein_coding	Abitram	ENSMUST00000131520	nonsense_mediated_decay		4	1	56802352	4360
ENSMUSG00000080872	processed_pseudogene	Gm11506	ENSMUST00000122414	processed_pseudogene		11	1	93695082	470
ENSMUSG00000037351	protein_coding	Actr1b	ENSMUST00000162684	retained_intron		1	-1	36709947	780
ENSMUSG00000105341	TEC	Gm43817	ENSMUST00000196459	TEC		5	1	105879583	2262
ENSMUSG00000058799	protein_coding	Nap1l1	ENSMUST00000219718	retained_intron		10	1	111493904	739
ENSMUSG00000038827	protein_coding	Abitram	ENSMUST00000152638	retained_intron		4	1	56802345	1775
ENSMUSG00000115151	lincRNA	Gm19276	ENSMUST00000227059	lincRNA		15	1	10814792	3390
ENSMUSG00000032127	protein_coding	Vps11	ENSMUST00000214510	nonsense_mediated_decay		9	-1	44361644	3812
ENSMUSG00000029866	protein_coding	Kel	ENSMUST00000031899	protein_coding	principal1	6	-1	41704339	2530
ENSMUSG00000031824	protein_coding	6430548M08Rik	ENSMUST00000108950	protein_coding	principal3	8	1	120144929	3125
ENSMUSG00000038827	protein_coding	Abitram	ENSMUST00000147763	nonsense_mediated_decay		4	1	56802618	522
ENSMUSG00000115151	lincRNA	Gm19276	ENSMUST00000228418	lincRNA		15	1	10814827	3435
ENSMUSG00000043340	antisense	6530409C15Rik	ENSMUST00000143099	antisense		6	1	28215555	631
ENSMUSG00000071722	protein_coding	Spin4	ENSMUST00000096367	protein_coding	principal1	X	-1	95026682	4173
ENSMUSG00000117733	lincRNA	AC163347.1	ENSMUST00000236306	lincRNA		18	1	55096360	614
ENSMUSG00000029866	protein_coding	Kel	ENSMUST00000194597	protein_coding		6	-1	41687992	322
ENSMUSG00000104521	TEC	Gm34073	ENSMUST00000195736	TEC		18	1	55143574	212
ENSMUSG00000043340	antisense	6530409C15Rik	ENSMUST00000143551	antisense		6	1	28215576	1573
ENSMUSG00000109725	TEC	Gm45265	ENSMUST00000210852	TEC		8	1	55005285	2497
ENSMUSG00000104455	TEC	Gm37828	ENSMUST00000192496	TEC		18	1	55339512	432
ENSMUSG00000031824	protein_coding	6430548M08Rik	ENSMUST00000144682	processed_transcript		8	1	120155864	590
ENSMUSG00000114902	processed_pseudogene	Gm4118	ENSMUST00000225750	processed_pseudogene		14	1	61558798	864
ENSMUSG00000110047	TEC	A230085B16Rik	ENSMUST00000209781	TEC		8	1	55055874	1856
ENSMUSG00000029866	protein_coding	Kel	ENSMUST00000141502	processed_transcript		6	-1	41687851	422
ENSMUSG00000108351	antisense	Gm36736	ENSMUST00000206060	antisense		7	-1	121393101	646
ENSMUSG00000029866	protein_coding	Kel	ENSMUST00000192118	protein_coding		6	-1	41699168	858
ENSMUSG00000109942	TEC	Gm45262	ENSMUST00000209917	TEC		8	1	55043059	1463
ENSMUSG00000037351	protein_coding	Actr1b	ENSMUST00000159448	protein_coding		1	-1	36709678	643
ENSMUSG00000031824	protein_coding	6430548M08Rik	ENSMUST00000212268	processed_transcript		8	1	120164194	459
ENSMUSG00000107320	TEC	Gm42549	ENSMUST00000202392	TEC		6	-1	28226170	7004
ENSMUSG00000109927	TEC	Gm45264	ENSMUST00000210090	TEC		8	1	55028401	3995
ENSMUSG00000083107	processed_pseudogene	Gm5303	ENSMUST00000117943	processed_pseudogene		6	-1	28363165	1252
ENSMUSG00000029866	protein_coding	Kel	ENSMUST00000153760	retained_intron		6	-1	41688959	384
ENSMUSG00000110342	TEC	Gm45263	ENSMUST00000210377	TEC		8	1	54959819	1375
ENSMUSG00000037351	protein_coding	Actr1b	ENSMUST00000160084	protein_coding		1	-1	36714422	728
ENSMUSG00000046321	protein_coding	Hs3st2	ENSMUST00000206880	protein_coding		7	1	121391859	1149
ENSMUSG00000033016	protein_coding	Nfatc1	ENSMUST00000167977	protein_coding	alternative2	18	-1	80708173	4604
ENSMUSG00000037351	protein_coding	Actr1b	ENSMUST00000160043	retained_intron		1	-1	36707167	417
ENSMUSG00000031824	protein_coding	6430548M08Rik	ENSMUST00000108948	protein_coding		8	1	120114152	1762
ENSMUSG00000114185	lincRNA	Gm47662	ENSMUST00000221299	lincRNA		13	1	32997062	3561
ENSMUSG00000017418	protein_coding	Arl5b	ENSMUST00000017562	protein_coding		2	1	15049395	6933
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000199169	protein_coding		3	1	55461916	1499
ENSMUSG00000032127	protein_coding	Vps11	ENSMUST00000216089	retained_intron		9	-1	44361634	2977
ENSMUSG00000037351	protein_coding	Actr1b	ENSMUST00000162662	processed_transcript		1	-1	36709919	356
ENSMUSG00000097960	lincRNA	A330074K22Rik	ENSMUST00000183235	lincRNA		8	-1	120228230	2489
ENSMUSG00000103555	TEC	Gm37337	ENSMUST00000192601	TEC		18	-1	55517114	993
ENSMUSG00000098119	processed_pseudogene	Gm26959	ENSMUST00000182376	processed_pseudogene		18	-1	55746228	978
ENSMUSG00000032127	protein_coding	Vps11	ENSMUST00000213249	nonsense_mediated_decay		9	-1	44358112	640
ENSMUSG00000112897	TEC	Gm47831	ENSMUST00000218354	TEC		10	1	33171710	777
ENSMUSG00000046321	protein_coding	Hs3st2	ENSMUST00000084628	protein_coding	principal1	7	1	121392290	2278
ENSMUSG00000033016	protein_coding	Nfatc1	ENSMUST00000170905	protein_coding	alternative2	18	-1	80712766	4591
ENSMUSG00000045479	protein_coding	Olfr459	ENSMUST00000214752	protein_coding	principal1	6	-1	41774714	3715
ENSMUSG00000032127	protein_coding	Vps11	ENSMUST00000213740	nonsense_mediated_decay		9	-1	44361637	1446
ENSMUSG00000102416	protein_coding	4933424G06Rik	ENSMUST00000192873	protein_coding		1	1	36710149	611
ENSMUSG00000112707	antisense	D830005E20Rik	ENSMUST00000217716	antisense		10	-1	33256357	1844
ENSMUSG00000112707	antisense	D830005E20Rik	ENSMUST00000219691	antisense		10	-1	33256418	971
ENSMUSG00000020334	protein_coding	Slc22a4	ENSMUST00000020586	protein_coding	principal1	11	-1	54028090	2263
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000199702	protein_coding		3	1	55461916	2922
ENSMUSG00000032850	protein_coding	Rnft2	ENSMUST00000117177	protein_coding	principal3	5	-1	118244861	4381
ENSMUSG00000017418	protein_coding	Arl5b	ENSMUST00000069870	protein_coding	alternative1	2	1	15055240	6981
ENSMUSG00000045479	protein_coding	Olfr459	ENSMUST00000214976	protein_coding	principal1	6	-1	41775177	3770
ENSMUSG00000111958	processed_pseudogene	Gm47844	ENSMUST00000219520	processed_pseudogene		10	-1	33436853	1372
ENSMUSG00000032127	protein_coding	Vps11	ENSMUST00000214460	protein_coding		9	-1	44359637	745
ENSMUSG00000112692	processed_pseudogene	Gm19073	ENSMUST00000219978	processed_pseudogene		10	-1	33300678	555
ENSMUSG00000045479	protein_coding	Olfr459	ENSMUST00000050412	protein_coding	principal1	6	-1	41772366	1109
ENSMUSG00000020334	protein_coding	Slc22a4	ENSMUST00000146351	processed_transcript		11	-1	54007964	678
ENSMUSG00000112182	processed_pseudogene	Gm47845	ENSMUST00000220148	processed_pseudogene		10	1	33211085	364
ENSMUSG00000112855	processed_pseudogene	Gm47842	ENSMUST00000220106	processed_pseudogene		10	-1	33327775	3764
ENSMUSG00000108811	antisense	4933432K03Rik	ENSMUST00000205739	antisense		7	-1	121589834	1247
ENSMUSG00000033016	protein_coding	Nfatc1	ENSMUST00000078049	protein_coding	alternative2	18	-1	80713058	4594
ENSMUSG00000108811	antisense	4933432K03Rik	ENSMUST00000206276	antisense		7	-1	121589836	2311
ENSMUSG00000102416	protein_coding	4933424G06Rik	ENSMUST00000208994	protein_coding	principal1	1	1	36714538	1120
ENSMUSG00000108811	antisense	4933432K03Rik	ENSMUST00000206244	antisense		7	-1	121609334	765
ENSMUSG00000102416	protein_coding	4933424G06Rik	ENSMUST00000195374	retained_intron		1	1	36714546	393
ENSMUSG00000071068	protein_coding	Treml2	ENSMUST00000233496	processed_transcript		17	1	48299498	984
ENSMUSG00000020334	protein_coding	Slc22a4	ENSMUST00000154369	processed_transcript		11	-1	54027952	566
ENSMUSG00000033016	protein_coding	Nfatc1	ENSMUST00000237776	processed_transcript		18	-1	80608975	672
ENSMUSG00000108409	lincRNA	1700025J12Rik	ENSMUST00000205586	lincRNA		7	1	121589903	630
ENSMUSG00000017418	protein_coding	Arl5b	ENSMUST00000128682	nonsense_mediated_decay		2	1	15055287	1035
ENSMUSG00000102416	protein_coding	4933424G06Rik	ENSMUST00000193459	processed_transcript		1	1	36744355	438
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000198437	protein_coding		3	1	55461916	4315
ENSMUSG00000038298	protein_coding	Pdzk1	ENSMUST00000058865	protein_coding	principal1	3	1	96830076	2406
ENSMUSG00000098200	processed_pseudogene	Gm7763	ENSMUST00000182220	processed_pseudogene		12	-1	62883282	1006
ENSMUSG00000017418	protein_coding	Arl5b	ENSMUST00000193836	protein_coding		2	1	15055347	481
ENSMUSG00000104237	lincRNA	Gm33533	ENSMUST00000193853	lincRNA		1	-1	36744792	1633
ENSMUSG00000042817	protein_coding	Flt3	ENSMUST00000049324	protein_coding	principal1	5	-1	147400489	3657
ENSMUSG00000110534	lincRNA	Gm45708	ENSMUST00000212785	lincRNA		8	-1	93628624	2752
ENSMUSG00000103869	TEC	Gm37420	ENSMUST00000195332	TEC		14	-1	61670131	2912
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000200352	protein_coding		3	1	55461972	1662
ENSMUSG00000017418	protein_coding	Arl5b	ENSMUST00000129509	nonsense_mediated_decay		2	1	15068139	778
ENSMUSG00000058933	processed_pseudogene	Gm5185	ENSMUST00000080271	processed_pseudogene		12	-1	63073144	619
ENSMUSG00000113393	processed_pseudogene	Gm48415	ENSMUST00000221219	processed_pseudogene		12	1	63170181	1723
ENSMUSG00000017418	protein_coding	Arl5b	ENSMUST00000192653	retained_intron		2	1	15069962	3210
ENSMUSG00000040424	protein_coding	Hipk4	ENSMUST00000108353	protein_coding	principal1	7	1	27523267	2409
ENSMUSG00000098183	lincRNA	Gm27010	ENSMUST00000182727	lincRNA		14	-1	61627337	863
ENSMUSG00000110534	lincRNA	Gm45708	ENSMUST00000212213	lincRNA		8	-1	93575443	1456
ENSMUSG00000114123	processed_pseudogene	Gm48416	ENSMUST00000222999	processed_pseudogene		12	1	63355784	2121
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000198821	processed_transcript		3	1	55527879	906
ENSMUSG00000017418	protein_coding	Arl5b	ENSMUST00000193883	protein_coding		2	1	15074999	706
ENSMUSG00000038298	protein_coding	Pdzk1	ENSMUST00000107070	protein_coding	principal1	3	1	96832154	2711
ENSMUSG00000046168	protein_coding	Kcnrg	ENSMUST00000225582	protein_coding	alternative2	14	1	61607457	1821
ENSMUSG00000112972	processed_pseudogene	Gm48417	ENSMUST00000220626	processed_pseudogene		12	1	63571863	3845
ENSMUSG00000033016	protein_coding	Nfatc1	ENSMUST00000236711	protein_coding	alternative2	18	-1	80713071	4797
ENSMUSG00000033016	protein_coding	Nfatc1	ENSMUST00000035800	protein_coding	principal3	18	-1	80708173	4505
ENSMUSG00000113684	processed_pseudogene	Gm48418	ENSMUST00000222419	processed_pseudogene		12	1	63927954	3808
ENSMUSG00000040424	protein_coding	Hipk4	ENSMUST00000037134	protein_coding		7	1	27527059	2926
ENSMUSG00000113602	processed_pseudogene	Gm5653	ENSMUST00000223393	processed_pseudogene		12	-1	63970749	1337
ENSMUSG00000022820	protein_coding	Ndufb4	ENSMUST00000023514	protein_coding	principal1	16	-1	37654453	971
ENSMUSG00000104308	TEC	Gm36971	ENSMUST00000195244	TEC		12	1	47165042	378
ENSMUSG00000113152	lincRNA	Gm48422	ENSMUST00000221687	lincRNA		12	-1	64152948	2706
ENSMUSG00000017418	protein_coding	Arl5b	ENSMUST00000239125	protein_coding	principal2	2	1	15055323	3608
ENSMUSG00000038298	protein_coding	Pdzk1	ENSMUST00000107069	protein_coding	principal1	3	1	96832171	2219
ENSMUSG00000113208	lincRNA	Gm48421	ENSMUST00000222001	lincRNA		12	1	64143748	489
ENSMUSG00000097937	processed_pseudogene	Gm6967	ENSMUST00000182599	processed_pseudogene		19	-1	46675279	1007
ENSMUSG00000098007	processed_pseudogene	Gm8614	ENSMUST00000182528	processed_pseudogene		18	-1	55838949	978
ENSMUSG00000107449	processed_pseudogene	Gm19165	ENSMUST00000204453	processed_pseudogene		6	1	59036889	1982
ENSMUSG00000102258	TEC	Gm38257	ENSMUST00000195881	TEC		2	1	15056713	2761
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000054237	protein_coding		3	1	55242526	7847
ENSMUSG00000107987	processed_pseudogene	Gm43905	ENSMUST00000204516	processed_pseudogene		6	-1	59193253	204
ENSMUSG00000019877	protein_coding	Serinc1	ENSMUST00000020027	protein_coding	principal1	10	-1	57532530	2880
ENSMUSG00000046168	protein_coding	Kcnrg	ENSMUST00000051184	protein_coding	principal2	14	1	61607482	1766
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000153011	processed_transcript		2	1	105679867	654
ENSMUSG00000022820	protein_coding	Ndufb4	ENSMUST00000135019	retained_intron		16	-1	37649359	465
ENSMUSG00000038298	protein_coding	Pdzk1	ENSMUST00000153256	nonsense_mediated_decay		3	1	96832171	2409
ENSMUSG00000022820	protein_coding	Ndufb4	ENSMUST00000231881	retained_intron		16	-1	37654366	933
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000027495	protein_coding	principal1	1	1	93478964	3779
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000154302	retained_intron		2	1	105681712	2343
ENSMUSG00000116529	processed_pseudogene	Gm4600	ENSMUST00000231714	processed_pseudogene		16	-1	37697340	571
ENSMUSG00000098088	lincRNA	Gm26916	ENSMUST00000183304	lincRNA		14	1	61629484	352
ENSMUSG00000019877	protein_coding	Serinc1	ENSMUST00000169122	protein_coding		10	-1	57532428	693
ENSMUSG00000043060	protein_coding	Fscb	ENSMUST00000059833	protein_coding	principal1	12	-1	64474690	3361
ENSMUSG00000080783	processed_pseudogene	Gm8250	ENSMUST00000117398	processed_pseudogene		19	1	18581455	774
ENSMUSG00000038298	protein_coding	Pdzk1	ENSMUST00000128789	protein_coding		3	1	96833226	531
ENSMUSG00000097997	lincRNA	Gm27017	ENSMUST00000183031	lincRNA		14	1	61648950	656
ENSMUSG00000102151	TEC	Gm37472	ENSMUST00000192342	TEC		14	-1	61681494	4052
ENSMUSG00000019877	protein_coding	Serinc1	ENSMUST00000170062	nonsense_mediated_decay		10	-1	57532410	596
ENSMUSG00000056220	protein_coding	Pla2g4a	ENSMUST00000070200	protein_coding	principal1	1	-1	149961290	2856
ENSMUSG00000071068	protein_coding	Treml2	ENSMUST00000233092	protein_coding	principal2	17	1	48299940	2094
ENSMUSG00000027797	protein_coding	Dclk1	ENSMUST00000070418	protein_coding		3	1	55461758	7012
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000136182	protein_coding		1	1	93478990	512
ENSMUSG00000091905	processed_pseudogene	Dnajb6-ps	ENSMUST00000167639	processed_pseudogene		12	1	64786311	691
ENSMUSG00000032850	protein_coding	Rnft2	ENSMUST00000121369	protein_coding	alternative1	5	-1	118245116	4431
ENSMUSG00000054079	protein_coding	Utp18	ENSMUST00000066888	protein_coding	principal1	11	-1	93885766	2613
ENSMUSG00000106354	TEC	Gm42607	ENSMUST00000200221	TEC		3	1	55483788	3393
ENSMUSG00000071068	protein_coding	Treml2	ENSMUST00000233602	processed_transcript		17	1	48300355	770
ENSMUSG00000056220	protein_coding	Pla2g4a	ENSMUST00000111926	protein_coding		1	-1	149922439	2835
ENSMUSG00000062376	protein_coding	Borcs7	ENSMUST00000074912	protein_coding	principal1	19	1	46689906	2176
ENSMUSG00000019877	protein_coding	Serinc1	ENSMUST00000166997	retained_intron		10	-1	57532477	2723
ENSMUSG00000105302	TEC	Gm19817	ENSMUST00000199764	TEC		3	1	55330841	2132
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000131175	protein_coding		1	1	93478993	730
ENSMUSG00000071068	protein_coding	Treml2	ENSMUST00000170941	protein_coding	alternative2	17	1	48300386	3983
ENSMUSG00000106651	TEC	Gm42608	ENSMUST00000197563	TEC		3	1	55517569	2018
ENSMUSG00000032850	protein_coding	Rnft2	ENSMUST00000134281	retained_intron		5	-1	118229145	775
ENSMUSG00000036820	protein_coding	Amdhd2	ENSMUST00000132944	processed_transcript		17	-1	24156739	422
ENSMUSG00000042817	protein_coding	Flt3	ENSMUST00000110549	processed_transcript		5	-1	147400489	3951
ENSMUSG00000032850	protein_coding	Rnft2	ENSMUST00000132831	protein_coding		5	-1	118201232	698
ENSMUSG00000036820	protein_coding	Amdhd2	ENSMUST00000234886	retained_intron		17	-1	24158035	863
ENSMUSG00000019877	protein_coding	Serinc1	ENSMUST00000164400	retained_intron		10	-1	57532409	479
ENSMUSG00000032850	protein_coding	Rnft2	ENSMUST00000154786	protein_coding		5	-1	118244994	799
ENSMUSG00000056220	protein_coding	Pla2g4a	ENSMUST00000190507	protein_coding		1	-1	149961258	613
ENSMUSG00000097228	antisense	Gm26597	ENSMUST00000181648	antisense		5	1	147399554	1477
ENSMUSG00000049232	protein_coding	Tigd2	ENSMUST00000062626	protein_coding	principal1	6	1	59208870	3007
ENSMUSG00000032850	protein_coding	Rnft2	ENSMUST00000144213	retained_intron		5	-1	118242921	801
ENSMUSG00000054079	protein_coding	Utp18	ENSMUST00000130797	processed_transcript		11	-1	93885766	3196
ENSMUSG00000056220	protein_coding	Pla2g4a	ENSMUST00000155438	processed_transcript		1	-1	149902199	332
ENSMUSG00000105975	antisense	Gm42609	ENSMUST00000196362	antisense		3	-1	55403122	3306
ENSMUSG00000032850	protein_coding	Rnft2	ENSMUST00000133372	protein_coding		5	-1	118244992	408
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000152778	retained_intron		1	1	93479021	696
ENSMUSG00000054079	protein_coding	Utp18	ENSMUST00000134807	processed_transcript		11	-1	93876143	665
ENSMUSG00000031517	protein_coding	Gpm6a	ENSMUST00000033915	protein_coding	principal1	8	1	54954843	3215
ENSMUSG00000114029	processed_pseudogene	Gm4806	ENSMUST00000222704	processed_pseudogene		12	1	64816815	1690
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000153826	protein_coding		1	1	93479035	424
ENSMUSG00000105975	antisense	Gm42609	ENSMUST00000196877	antisense		3	-1	55401024	1418
ENSMUSG00000056220	protein_coding	Pla2g4a	ENSMUST00000142040	retained_intron		1	-1	149961284	3453
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000188923	retained_intron		1	1	93479059	3310
ENSMUSG00000099364	lincRNA	5730419F03Rik	ENSMUST00000190504	lincRNA		1	-1	78609508	2092
ENSMUSG00000113075	processed_pseudogene	Rpl7a-ps1	ENSMUST00000223350	processed_pseudogene		12	-1	64877628	793
ENSMUSG00000035235	protein_coding	Trim13	ENSMUST00000165015	protein_coding	principal1	14	1	61598247	1619
ENSMUSG00000056220	protein_coding	Pla2g4a	ENSMUST00000134676	processed_transcript		1	-1	149961255	247
ENSMUSG00000061410	protein_coding	Zcchc14	ENSMUST00000046386	protein_coding	principal1	8	-1	121652901	7444
ENSMUSG00000082373	unitary_pseudogene	Gm13754	ENSMUST00000120486	unitary_pseudogene		1	1	63917848	998
ENSMUSG00000035235	protein_coding	Trim13	ENSMUST00000039562	protein_coding	principal1	14	1	61599540	1550
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000129211	protein_coding		1	1	93479059	784
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000112912	protein_coding		1	1	93479108	756
ENSMUSG00000083677	processed_pseudogene	Gm11699	ENSMUST00000119016	processed_pseudogene		11	1	114932871	401
ENSMUSG00000085032	lincRNA	Gm11217	ENSMUST00000141162	lincRNA		4	-1	64276603	1729
ENSMUSG00000061410	protein_coding	Zcchc14	ENSMUST00000154725	protein_coding		8	-1	121604514	2607
ENSMUSG00000039841	protein_coding	Zfp800	ENSMUST00000115320	protein_coding	principal1	6	-1	28261911	4311
ENSMUSG00000004500	protein_coding	Zfp324	ENSMUST00000038701	protein_coding	principal1	7	1	12965838	4315
ENSMUSG00000044689	lincRNA	Gm13749	ENSMUST00000133244	lincRNA		1	1	63964727	1432
ENSMUSG00000061410	protein_coding	Zcchc14	ENSMUST00000139379	retained_intron		8	-1	121607218	446
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000149532	protein_coding		1	1	93479220	477
ENSMUSG00000069237	protein_coding	Fam8a1	ENSMUST00000099547	protein_coding	principal1	13	1	46669522	3664
ENSMUSG00000039841	protein_coding	Zfp800	ENSMUST00000035930	protein_coding	principal1	6	-1	28398005	3881
ENSMUSG00000061410	protein_coding	Zcchc14	ENSMUST00000134212	retained_intron		8	-1	121628610	625
ENSMUSG00000004500	protein_coding	Zfp324	ENSMUST00000124387	nonsense_mediated_decay		7	1	12965845	4595
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000142401	protein_coding		1	1	93479223	552
ENSMUSG00000069237	protein_coding	Fam8a1	ENSMUST00000150376	retained_intron		13	1	46671191	408
ENSMUSG00000093406	processed_pseudogene	Rpl48-ps1	ENSMUST00000177147	processed_pseudogene		10	1	57601393	556
ENSMUSG00000097084	protein_coding	Foxl1	ENSMUST00000181609	protein_coding	principal1	8	1	121127940	2705
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000150931	protein_coding		1	1	93479473	779
ENSMUSG00000004500	protein_coding	Zfp324	ENSMUST00000128293	nonsense_mediated_decay		7	1	12965867	4310
ENSMUSG00000110537	lincRNA	Gm4316	ENSMUST00000212411	lincRNA		8	1	123165255	2617
ENSMUSG00000026669	protein_coding	Mcm10	ENSMUST00000102985	protein_coding	principal1	2	-1	5012344	4867
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000152476	retained_intron		1	1	93505193	466
ENSMUSG00000045441	protein_coding	Gprin3	ENSMUST00000051065	protein_coding	principal1	6	-1	59426294	8339
ENSMUSG00000004500	protein_coding	Zfp324	ENSMUST00000210619	protein_coding		7	1	12966103	447
ENSMUSG00000024725	protein_coding	Ostf1	ENSMUST00000236615	protein_coding		19	-1	18631823	974
ENSMUSG00000026276	protein_coding	Septin2	ENSMUST00000157021	protein_coding		1	1	93505568	418
ENSMUSG00000029290	protein_coding	Zfp326	ENSMUST00000150440	protein_coding		5	1	105876565	1365
ENSMUSG00000110537	lincRNA	Gm4316	ENSMUST00000212490	lincRNA		8	1	123172845	1115
ENSMUSG00000039841	protein_coding	Zfp800	ENSMUST00000115321	protein_coding	principal1	6	-1	28261923	2699
ENSMUSG00000099733	unprocessed_pseudogene	Gm21880	ENSMUST00000187275	unprocessed_pseudogene		Y	-1	72104086	696
ENSMUSG00000115343	protein_coding	Vmn1r21	ENSMUST00000226191	protein_coding	principal1	6	-1	57844498	1669
ENSMUSG00000097087	lincRNA	Gm26878	ENSMUST00000181778	lincRNA		8	1	120880206	1644
ENSMUSG00000101339	processed_pseudogene	Gm29180	ENSMUST00000190003	processed_pseudogene		Y	1	72122523	315
ENSMUSG00000039841	protein_coding	Zfp800	ENSMUST00000123098	protein_coding		6	-1	28261914	2084
ENSMUSG00000099731	unprocessed_pseudogene	Gm29181	ENSMUST00000191288	unprocessed_pseudogene		Y	1	72158991	696
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000182191	protein_coding		4	-1	154025616	3535
ENSMUSG00000026820	protein_coding	Ptges2	ENSMUST00000028162	protein_coding	principal1	2	1	32395896	4978
ENSMUSG00000110523	lincRNA	C230057M02Rik	ENSMUST00000212444	lincRNA		8	-1	122752325	1943
ENSMUSG00000117633	lincRNA	8430422H06Rik	ENSMUST00000234218	lincRNA		18	1	14232309	1271
ENSMUSG00000039841	protein_coding	Zfp800	ENSMUST00000155494	protein_coding		6	-1	28261932	703
ENSMUSG00000024725	protein_coding	Ostf1	ENSMUST00000025631	protein_coding	principal1	19	-1	18631789	2726
ENSMUSG00000117470	processed_pseudogene	Gm50095	ENSMUST00000234483	processed_pseudogene		18	1	14308387	394
ENSMUSG00000038304	protein_coding	Cd160	ENSMUST00000107074	protein_coding	principal3	3	-1	96829351	2590
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000182151	protein_coding	principal1	4	-1	154025912	5091
ENSMUSG00000106959	TEC	Gm42548	ENSMUST00000202669	TEC		6	-1	28237013	3933
ENSMUSG00000115343	protein_coding	Vmn1r21	ENSMUST00000203310	protein_coding	principal1	6	-1	57850343	1779
ENSMUSG00000115343	protein_coding	Vmn1r21	ENSMUST00000203488	protein_coding	principal1	6	-1	57850343	1673
ENSMUSG00000110523	lincRNA	C230057M02Rik	ENSMUST00000212334	lincRNA		8	-1	122738511	3306
ENSMUSG00000026820	protein_coding	Ptges2	ENSMUST00000123714	nonsense_mediated_decay		2	1	32396440	519
ENSMUSG00000069862	processed_pseudogene	Rps12-ps9	ENSMUST00000139165	processed_pseudogene		8	1	123206623	399
ENSMUSG00000107431	TEC	Gm44114	ENSMUST00000203270	TEC		6	1	57845586	2727
ENSMUSG00000063193	protein_coding	Cd300lb	ENSMUST00000149663	protein_coding		11	-1	114934371	2641
ENSMUSG00000093530	unprocessed_pseudogene	Vmn1r-ps12	ENSMUST00000176946	unprocessed_pseudogene		6	-1	57872916	502
ENSMUSG00000043308	protein_coding	Vmn1r75	ENSMUST00000227611	protein_coding	alternative2	7	1	11874630	4336
ENSMUSG00000029290	protein_coding	Zfp326	ENSMUST00000150109	retained_intron		5	1	105876568	2021
ENSMUSG00000026820	protein_coding	Ptges2	ENSMUST00000130121	retained_intron		2	1	32397471	765
ENSMUSG00000043308	protein_coding	Vmn1r75	ENSMUST00000226622	protein_coding	principal2	7	1	11874630	6638
ENSMUSG00000038304	protein_coding	Cd160	ENSMUST00000047702	protein_coding	principal3	3	-1	96814521	1121
ENSMUSG00000024725	protein_coding	Ostf1	ENSMUST00000236728	nonsense_mediated_decay		19	-1	18631789	1322
ENSMUSG00000043308	protein_coding	Vmn1r75	ENSMUST00000228646	protein_coding	alternative2	7	1	11874630	4466
ENSMUSG00000043308	protein_coding	Vmn1r75	ENSMUST00000226855	protein_coding	principal2	7	1	11874630	6548
ENSMUSG00000038304	protein_coding	Cd160	ENSMUST00000165991	protein_coding	alternative2	3	-1	96829351	2458
ENSMUSG00000035203	protein_coding	Epn1	ENSMUST00000098845	protein_coding	principal2	7	1	5080235	2565
ENSMUSG00000115091	protein_coding	Vmn1r22	ENSMUST00000228076	protein_coding	principal1	6	-1	57908028	3011
ENSMUSG00000043308	protein_coding	Vmn1r75	ENSMUST00000228268	protein_coding	alternative2	7	1	11874630	4376
ENSMUSG00000043308	protein_coding	Vmn1r75	ENSMUST00000228463	protein_coding	principal2	7	1	11874630	6508
ENSMUSG00000115091	protein_coding	Vmn1r22	ENSMUST00000228905	protein_coding		6	-1	57908028	2394
ENSMUSG00000026669	protein_coding	Mcm10	ENSMUST00000150091	retained_intron		2	-1	5001558	2356
ENSMUSG00000024725	protein_coding	Ostf1	ENSMUST00000156908	retained_intron		19	-1	18631740	2816
ENSMUSG00000115091	protein_coding	Vmn1r22	ENSMUST00000227650	protein_coding	principal1	6	-1	57908028	3674
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000140173	processed_transcript		2	1	105682463	925
ENSMUSG00000024725	protein_coding	Ostf1	ENSMUST00000138860	retained_intron		19	-1	18631718	516
ENSMUSG00000115091	protein_coding	Vmn1r22	ENSMUST00000227342	protein_coding		6	-1	57908028	3057
ENSMUSG00000043308	protein_coding	Vmn1r75	ENSMUST00000057229	protein_coding	principal2	7	1	11880343	918
ENSMUSG00000096902	protein_coding	Gm20843	ENSMUST00000191305	protein_coding	principal5	Y	-1	72247118	925
ENSMUSG00000115091	protein_coding	Vmn1r22	ENSMUST00000228257	protein_coding	principal1	6	-1	57908028	3079
ENSMUSG00000112215	processed_pseudogene	Gm2089	ENSMUST00000218294	processed_pseudogene		12	1	47199991	479
ENSMUSG00000026669	protein_coding	Mcm10	ENSMUST00000125201	retained_intron		2	-1	5005099	2475
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000142407	protein_coding	principal1	5	1	65537233	4893
ENSMUSG00000063193	protein_coding	Cd300lb	ENSMUST00000239005	protein_coding	alternative2	11	-1	114934386	2880
ENSMUSG00000096902	protein_coding	Gm20843	ENSMUST00000178505	protein_coding	alternative2	Y	-1	72245698	567
ENSMUSG00000026669	protein_coding	Mcm10	ENSMUST00000125349	retained_intron		2	-1	4995894	1343
ENSMUSG00000115091	protein_coding	Vmn1r22	ENSMUST00000228322	protein_coding	principal1	6	-1	57900990	909
ENSMUSG00000113049	lincRNA	Gm48544	ENSMUST00000223084	lincRNA		13	1	13034858	2394
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000135412	processed_transcript		2	1	105682508	870
ENSMUSG00000063193	protein_coding	Cd300lb	ENSMUST00000126655	processed_transcript		11	-1	114934287	353
ENSMUSG00000118348	processed_pseudogene	Gm6942	ENSMUST00000235726	processed_pseudogene		18	1	55841665	1354
ENSMUSG00000110054	unprocessed_pseudogene	Gm18851	ENSMUST00000210087	unprocessed_pseudogene		7	-1	11900556	1058
ENSMUSG00000092285	unprocessed_pseudogene	Vmn1r-ps56	ENSMUST00000172769	unprocessed_pseudogene		7	-1	11912210	965
ENSMUSG00000112232	lincRNA	Gm48578	ENSMUST00000218324	lincRNA		12	1	47532257	472
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000154643	retained_intron		2	1	105682535	2919
ENSMUSG00000035203	protein_coding	Epn1	ENSMUST00000146317	protein_coding		7	1	5080240	638
ENSMUSG00000103475	TEC	Gm37697	ENSMUST00000195680	TEC		2	1	14345677	1844
ENSMUSG00000029290	protein_coding	Zfp326	ENSMUST00000031227	protein_coding	principal1	5	1	105876568	2667
ENSMUSG00000063193	protein_coding	Cd300lb	ENSMUST00000106581	protein_coding	principal2	11	-1	114934386	2880
ENSMUSG00000074221	protein_coding	Zfp568	ENSMUST00000148442	protein_coding	principal3	7	1	29983955	4005
ENSMUSG00000113150	processed_pseudogene	Gm18263	ENSMUST00000220846	processed_pseudogene		13	1	13076118	1928
ENSMUSG00000093376	protein_coding	Vmn1r23	ENSMUST00000175817	protein_coding	principal1	6	-1	57926838	997
ENSMUSG00000118141	lincRNA	Gm4230	ENSMUST00000235251	lincRNA		18	1	55938153	1012
ENSMUSG00000074221	protein_coding	Zfp568	ENSMUST00000207940	protein_coding		7	1	29984361	666
ENSMUSG00000035203	protein_coding	Epn1	ENSMUST00000153169	protein_coding		7	1	5080268	729
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000138365	processed_transcript		2	1	105682537	874
ENSMUSG00000093541	processed_pseudogene	Gm20660	ENSMUST00000177515	processed_pseudogene		6	-1	57949971	289
ENSMUSG00000101825	unprocessed_pseudogene	Gm21806	ENSMUST00000188405	unprocessed_pseudogene		Y	1	67948842	696
ENSMUSG00000112908	processed_pseudogene	Gm7392	ENSMUST00000217815	processed_pseudogene		12	1	47812905	345
ENSMUSG00000074221	protein_coding	Zfp568	ENSMUST00000209185	retained_intron		7	1	29985256	500
ENSMUSG00000026669	protein_coding	Mcm10	ENSMUST00000027980	protein_coding	principal1	2	-1	5012791	3494
ENSMUSG00000109811	processed_pseudogene	Tpt1-ps4	ENSMUST00000210908	processed_pseudogene		7	1	11915871	503
ENSMUSG00000085572	antisense	Gm16234	ENSMUST00000124976	antisense		10	1	14664220	815
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000201266	protein_coding		5	1	65537261	1449
ENSMUSG00000113567	unprocessed_pseudogene	Gm32300	ENSMUST00000221735	unprocessed_pseudogene		13	-1	13081311	515
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000145744	processed_transcript		2	1	105682547	743
ENSMUSG00000115507	protein_coding	Vmn1r24	ENSMUST00000228097	protein_coding	principal1	6	-1	57961503	1901
ENSMUSG00000074221	protein_coding	Zfp568	ENSMUST00000146074	protein_coding	alternative2	7	1	29985299	6867
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000155081	processed_transcript		2	1	105682637	778
ENSMUSG00000115507	protein_coding	Vmn1r24	ENSMUST00000228315	protein_coding	principal1	6	-1	57956531	891
ENSMUSG00000099976	unprocessed_pseudogene	Gm20935	ENSMUST00000187518	unprocessed_pseudogene		Y	1	68023542	693
ENSMUSG00000074221	protein_coding	Zfp568	ENSMUST00000074322	protein_coding	principal3	7	1	29987773	2016
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000123000	retained_intron		2	1	105683754	1096
ENSMUSG00000074221	protein_coding	Zfp568	ENSMUST00000177931	protein_coding	alternative2	7	1	29987773	2013
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000212882	protein_coding	alternative2	8	-1	104624345	2923
ENSMUSG00000111984	unprocessed_pseudogene	Gm46327	ENSMUST00000218240	unprocessed_pseudogene		12	-1	48047534	365
ENSMUSG00000026669	protein_coding	Mcm10	ENSMUST00000129443	processed_transcript		2	-1	5012753	690
ENSMUSG00000115668	protein_coding	Vmn1r25	ENSMUST00000176572	protein_coding	principal1	6	-1	57980810	1101
ENSMUSG00000098141	processed_pseudogene	Gm6944	ENSMUST00000182449	processed_pseudogene		18	1	55972286	1006
ENSMUSG00000099501	lincRNA	Gm29662	ENSMUST00000185620	lincRNA		Y	-1	68134861	1499
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000146803	processed_transcript		2	1	105685322	2148
ENSMUSG00000035203	protein_coding	Epn1	ENSMUST00000045277	protein_coding	principal2	7	1	5080293	2334
ENSMUSG00000026669	protein_coding	Mcm10	ENSMUST00000146257	retained_intron		2	-1	5005319	508
ENSMUSG00000108110	processed_pseudogene	Gm18012	ENSMUST00000204558	processed_pseudogene		6	1	59942351	773
ENSMUSG00000112085	unprocessed_pseudogene	Gm48587	ENSMUST00000218671	unprocessed_pseudogene		12	1	48495219	268
ENSMUSG00000115668	protein_coding	Vmn1r25	ENSMUST00000228585	protein_coding	principal1	6	-1	57979302	909
ENSMUSG00000026669	protein_coding	Mcm10	ENSMUST00000139882	retained_intron		2	-1	4993257	869
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000147946	retained_intron		2	1	105692483	527
ENSMUSG00000027168	protein_coding	Pax6	ENSMUST00000167211	protein_coding	principal3	2	1	105675513	2814
ENSMUSG00000099501	lincRNA	Gm29662	ENSMUST00000190065	lincRNA		Y	-1	68134408	438
ENSMUSG00000026669	protein_coding	Mcm10	ENSMUST00000125851	retained_intron		2	-1	5012715	866
ENSMUSG00000113624	processed_pseudogene	Gm18879	ENSMUST00000221187	processed_pseudogene		13	1	13103874	1537
ENSMUSG00000107678	unprocessed_pseudogene	Vmn1r-ps13	ENSMUST00000204697	unprocessed_pseudogene		6	-1	57993581	134
ENSMUSG00000107481	lincRNA	4833403J16Rik	ENSMUST00000204490	lincRNA		6	1	48755338	1031
ENSMUSG00000035203	protein_coding	Epn1	ENSMUST00000152083	processed_transcript		7	1	5083665	732
ENSMUSG00000026669	protein_coding	Mcm10	ENSMUST00000151533	retained_intron		2	-1	4994838	789
ENSMUSG00000115267	protein_coding	Vmn1r76	ENSMUST00000226947	protein_coding	alternative2	7	-1	11938213	8145
ENSMUSG00000108298	lincRNA	Gm44226	ENSMUST00000205203	lincRNA		6	-1	48755986	1195
ENSMUSG00000100571	processed_pseudogene	Gm29474	ENSMUST00000187688	processed_pseudogene		Y	-1	9609575	379
ENSMUSG00000115267	protein_coding	Vmn1r76	ENSMUST00000226300	protein_coding	alternative2	7	-1	11938213	8189
ENSMUSG00000118137	processed_pseudogene	Gm50385	ENSMUST00000236344	processed_pseudogene		18	1	56284852	457
ENSMUSG00000035203	protein_coding	Epn1	ENSMUST00000208634	protein_coding	alternative1	7	1	5083755	2127
ENSMUSG00000106934	TEC	Gm42506	ENSMUST00000202009	TEC		5	1	36910114	150
ENSMUSG00000040322	protein_coding	Slc25a24	ENSMUST00000029477	protein_coding	principal1	3	1	109123149	3431
ENSMUSG00000048697	protein_coding	Vmn1r26	ENSMUST00000228951	protein_coding	principal1	6	-1	58014231	4591
ENSMUSG00000115267	protein_coding	Vmn1r76	ENSMUST00000058772	protein_coding	principal2	7	-1	11931285	975
ENSMUSG00000035203	protein_coding	Epn1	ENSMUST00000155436	retained_intron		7	1	5089838	456
ENSMUSG00000048697	protein_coding	Vmn1r26	ENSMUST00000228070	protein_coding	principal1	6	-1	58015159	4419
ENSMUSG00000091277	unprocessed_pseudogene	Gm1818	ENSMUST00000169406	unprocessed_pseudogene		12	-1	48559885	1184
ENSMUSG00000100087	unprocessed_pseudogene	Gm29475	ENSMUST00000190767	unprocessed_pseudogene		Y	-1	9726230	312
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000211903	protein_coding	principal3	8	-1	104624263	2874
ENSMUSG00000048697	protein_coding	Vmn1r26	ENSMUST00000228040	protein_coding	principal1	6	-1	58015159	4546
ENSMUSG00000117688	processed_pseudogene	Gm8629	ENSMUST00000235993	processed_pseudogene		18	1	56390143	475
ENSMUSG00000086029	antisense	Pax6os1	ENSMUST00000149133	antisense		2	-1	105670330	1464
ENSMUSG00000112005	processed_pseudogene	Gm29818	ENSMUST00000218070	processed_pseudogene		12	1	48632293	165
ENSMUSG00000087487	antisense	Ppp2r2cos	ENSMUST00000152862	antisense		5	-1	36876879	1491
ENSMUSG00000040322	protein_coding	Slc25a24	ENSMUST00000140786	nonsense_mediated_decay		3	1	109123162	667
ENSMUSG00000048697	protein_coding	Vmn1r26	ENSMUST00000049694	protein_coding	principal1	6	-1	58009202	1020
ENSMUSG00000099991	lincRNA	Gm29660	ENSMUST00000185631	lincRNA		Y	1	68165621	2166
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000212324	protein_coding		8	-1	104624215	506
ENSMUSG00000086029	antisense	Pax6os1	ENSMUST00000126948	antisense		2	-1	105670280	600
ENSMUSG00000094556	protein_coding	Gm20821	ENSMUST00000179829	protein_coding	principal1	Y	1	9781804	1153
ENSMUSG00000108639	unprocessed_pseudogene	AC124542.1	ENSMUST00000205588	unprocessed_pseudogene		12	-1	48906044	908
ENSMUSG00000110271	processed_pseudogene	Gm45387	ENSMUST00000209792	processed_pseudogene		7	-1	11953403	632
ENSMUSG00000094556	protein_coding	Gm20821	ENSMUST00000180352	protein_coding	principal1	Y	1	9783380	684
ENSMUSG00000081701	transcribed_processed_pseudogene	Gm13890	ENSMUST00000117578	transcribed_processed_pseudogene		2	-1	105537482	390
ENSMUSG00000071419	processed_pseudogene	Rps15-ps2	ENSMUST00000121788	processed_pseudogene		6	1	58017506	438
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000163783	protein_coding	alternative2	8	-1	104624396	2910
ENSMUSG00000019787	protein_coding	Trdn	ENSMUST00000219982	protein_coding	alternative2	10	1	33080554	4149
ENSMUSG00000093382	transcribed_unprocessed_pseudogene	Vmn1r-ps14	ENSMUST00000237214	processed_transcript		6	-1	58049899	3452
ENSMUSG00000093382	transcribed_unprocessed_pseudogene	Vmn1r-ps14	ENSMUST00000176859	transcribed_unprocessed_pseudogene		6	-1	58049847	913
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000201292	protein_coding		5	1	65537276	1529
ENSMUSG00000029290	protein_coding	Zfp326	ENSMUST00000136558	retained_intron		5	1	105876568	4672
ENSMUSG00000102424	lincRNA	Paupar	ENSMUST00000194826	lincRNA		2	-1	105661343	3482
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000213033	protein_coding		8	-1	104617982	733
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000201984	protein_coding		5	1	65537291	1449
ENSMUSG00000093666	transcribed_unprocessed_pseudogene	Vmn1r-ps15	ENSMUST00000237883	processed_transcript		6	-1	58079129	4630
ENSMUSG00000093666	transcribed_unprocessed_pseudogene	Vmn1r-ps15	ENSMUST00000177365	transcribed_unprocessed_pseudogene		6	-1	58078082	910
ENSMUSG00000036820	protein_coding	Amdhd2	ENSMUST00000129523	protein_coding		17	-1	24163664	1526
ENSMUSG00000093560	processed_pseudogene	Gm6695	ENSMUST00000177264	processed_pseudogene		6	1	58091076	1172
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000211849	protein_coding		8	-1	104616114	474
ENSMUSG00000079025	protein_coding	Gsdmc	ENSMUST00000110125	protein_coding	principal2	15	-1	63808759	2405
ENSMUSG00000034587	processed_transcript	8430429K09Rik	ENSMUST00000136038	processed_transcript		11	1	3452365	407
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000211889	protein_coding		8	-1	104616136	519
ENSMUSG00000039264	protein_coding	Gimap3	ENSMUST00000204036	protein_coding	principal1	6	-1	48770851	2145
ENSMUSG00000107530	unprocessed_pseudogene	Vmn1r-ps16	ENSMUST00000204747	unprocessed_pseudogene		6	-1	58108167	105
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000212420	protein_coding		8	-1	104618120	594
ENSMUSG00000079025	protein_coding	Gsdmc	ENSMUST00000173503	protein_coding	alternative2	15	-1	63808759	2375
ENSMUSG00000029290	protein_coding	Zfp326	ENSMUST00000138615	nonsense_mediated_decay		5	1	105876576	1554
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000202679	protein_coding		5	1	65537291	4682
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000202082	protein_coding		5	1	65537320	4506
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000212045	protein_coding		8	-1	104616382	646
ENSMUSG00000036820	protein_coding	Amdhd2	ENSMUST00000130520	retained_intron		17	-1	24163730	1530
ENSMUSG00000029290	protein_coding	Zfp326	ENSMUST00000133155	processed_transcript		5	1	105876941	477
ENSMUSG00000081176	processed_pseudogene	H3f3a-ps2	ENSMUST00000119544	processed_pseudogene		16	-1	91114599	411
ENSMUSG00000006567	protein_coding	Atp7b	ENSMUST00000006742	protein_coding	principal2	8	-1	22060305	6505
ENSMUSG00000086115	processed_pseudogene	Gm15733	ENSMUST00000132957	processed_pseudogene		5	1	9353759	242
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000212689	processed_transcript		8	-1	104624266	421
ENSMUSG00000029290	protein_coding	Zfp326	ENSMUST00000135215	retained_intron		5	1	105878770	1109
ENSMUSG00000034587	processed_transcript	8430429K09Rik	ENSMUST00000144844	processed_transcript		11	1	3452437	505
ENSMUSG00000029290	protein_coding	Zfp326	ENSMUST00000135374	retained_intron		5	1	105890944	387
ENSMUSG00000036820	protein_coding	Amdhd2	ENSMUST00000040735	protein_coding	principal1	17	-1	24163766	1496
ENSMUSG00000116981	processed_pseudogene	Gm49611	ENSMUST00000231448	processed_pseudogene		16	-1	91133429	309
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000212447	protein_coding		8	-1	104624184	720
ENSMUSG00000039264	protein_coding	Gimap3	ENSMUST00000038811	protein_coding	principal1	6	-1	48766958	1968
ENSMUSG00000029290	protein_coding	Zfp326	ENSMUST00000147683	retained_intron		5	1	105904914	2098
ENSMUSG00000116749	processed_pseudogene	Gm49612	ENSMUST00000232284	processed_pseudogene		16	-1	91135476	202
ENSMUSG00000006567	protein_coding	Atp7b	ENSMUST00000110738	protein_coding	alternative2	8	-1	22060019	4044
ENSMUSG00000002948	protein_coding	Map2k7	ENSMUST00000110998	protein_coding	principal3	8	1	4238740	3497
ENSMUSG00000116763	lincRNA	Gm41492	ENSMUST00000231396	lincRNA		16	-1	91159089	2155
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000212748	nonsense_mediated_decay		8	-1	104624290	730
ENSMUSG00000036820	protein_coding	Amdhd2	ENSMUST00000138685	protein_coding		17	-1	24163664	1651
ENSMUSG00000086243	lincRNA	Gm12121	ENSMUST00000131630	lincRNA		11	1	34141827	500
ENSMUSG00000036820	protein_coding	Amdhd2	ENSMUST00000234818	retained_intron		17	-1	24157786	1462
ENSMUSG00000089949	antisense	Gm16137	ENSMUST00000161571	antisense		15	-1	37243162	664
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000003284	protein_coding	principal1	7	1	44997648	2031
ENSMUSG00000031881	protein_coding	Cdh16	ENSMUST00000212662	protein_coding		8	-1	104623949	632
ENSMUSG00000034587	processed_transcript	8430429K09Rik	ENSMUST00000146456	processed_transcript		11	1	3452472	1675
ENSMUSG00000036820	protein_coding	Amdhd2	ENSMUST00000131766	retained_intron		17	-1	24163693	1225
ENSMUSG00000089804	antisense	Gm16136	ENSMUST00000160264	antisense		15	-1	37233309	1080
ENSMUSG00000097713	processed_pseudogene	Gm7741	ENSMUST00000181445	processed_pseudogene		3	1	35863877	989
ENSMUSG00000057193	protein_coding	Slc44a2	ENSMUST00000217461	protein_coding	alternative1	9	1	21320698	3478
ENSMUSG00000042743	protein_coding	Sgtb	ENSMUST00000044385	protein_coding	principal1	13	1	104109741	3048
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000202601	nonsense_mediated_decay		5	1	65537334	890
ENSMUSG00000028483	protein_coding	Snapc3	ENSMUST00000143533	nonsense_mediated_decay		4	1	83417749	2710
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000200946	protein_coding		5	1	65537362	473
ENSMUSG00000089804	antisense	Gm16136	ENSMUST00000162520	antisense		15	-1	37233159	1121
ENSMUSG00000116088	antisense	Gm49460	ENSMUST00000230426	antisense		15	1	72588283	447
ENSMUSG00000116314	processed_pseudogene	Gm49459	ENSMUST00000229330	processed_pseudogene		15	1	72725404	457
ENSMUSG00000019868	protein_coding	Vta1	ENSMUST00000154132	protein_coding	principal2	10	-1	14705560	1974
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000201383	protein_coding		5	1	65537484	1553
ENSMUSG00000089804	antisense	Gm16136	ENSMUST00000159411	antisense		15	-1	37233141	339
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000202721	retained_intron		5	1	65569383	2778
ENSMUSG00000042743	protein_coding	Sgtb	ENSMUST00000160322	protein_coding		13	1	104109773	771
ENSMUSG00000042774	protein_coding	Olfr1353	ENSMUST00000039718	protein_coding	principal1	10	1	78963309	1992
ENSMUSG00000029120	protein_coding	Ppp2r2c	ENSMUST00000031003	protein_coding	principal1	5	1	36868513	4088
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000209066	protein_coding	principal1	7	1	44997666	1712
ENSMUSG00000034587	processed_transcript	8430429K09Rik	ENSMUST00000142397	processed_transcript		11	1	3452472	968
ENSMUSG00000042774	protein_coding	Olfr1353	ENSMUST00000205193	protein_coding	principal1	10	1	78963309	1924
ENSMUSG00000029203	protein_coding	Ube2k	ENSMUST00000202572	retained_intron		5	1	65591596	780
ENSMUSG00000004207	protein_coding	Psap	ENSMUST00000165878	protein_coding	alternative2	10	1	60284461	2564
ENSMUSG00000042743	protein_coding	Sgtb	ENSMUST00000159574	protein_coding		13	1	104109829	919
ENSMUSG00000092540	processed_pseudogene	Gm8738	ENSMUST00000172606	processed_pseudogene		11	-1	103880243	329
ENSMUSG00000107362	TEC	Gm40309	ENSMUST00000202699	TEC		5	1	65541929	1752
ENSMUSG00000034587	processed_transcript	8430429K09Rik	ENSMUST00000154397	processed_transcript		11	1	3452480	442
ENSMUSG00000028483	protein_coding	Snapc3	ENSMUST00000137512	nonsense_mediated_decay		4	1	83417744	1993
ENSMUSG00000029120	protein_coding	Ppp2r2c	ENSMUST00000201156	protein_coding		5	1	36868663	461
ENSMUSG00000042774	protein_coding	Olfr1353	ENSMUST00000204849	protein_coding	principal1	10	1	78969598	1015
ENSMUSG00000081059	processed_pseudogene	Gm11945	ENSMUST00000120551	processed_pseudogene		11	-1	3471377	476
ENSMUSG00000100049	unprocessed_pseudogene	Gm28506	ENSMUST00000189937	unprocessed_pseudogene		Y	-1	9986276	150
ENSMUSG00000029120	protein_coding	Ppp2r2c	ENSMUST00000138124	processed_transcript		5	1	36939430	453
ENSMUSG00000084936	antisense	Gm11583	ENSMUST00000132296	antisense		11	1	97160990	466
ENSMUSG00000015027	protein_coding	Galns	ENSMUST00000015171	protein_coding	principal1	8	-1	122611463	2557
ENSMUSG00000100477	unprocessed_pseudogene	Gm28507	ENSMUST00000189737	unprocessed_pseudogene		Y	-1	10019766	703
ENSMUSG00000031553	protein_coding	Adam3	ENSMUST00000167431	protein_coding		8	-1	24687963	249
ENSMUSG00000028483	protein_coding	Snapc3	ENSMUST00000071544	protein_coding		4	1	83417731	942
ENSMUSG00000100800	unprocessed_pseudogene	Gm21301	ENSMUST00000189476	unprocessed_pseudogene		Y	-1	10066481	699
ENSMUSG00000019868	protein_coding	Vta1	ENSMUST00000020018	nonsense_mediated_decay		10	-1	14705500	1219
ENSMUSG00000015027	protein_coding	Galns	ENSMUST00000212319	protein_coding		8	-1	122611404	2111
ENSMUSG00000099439	unprocessed_pseudogene	Gm29142	ENSMUST00000188009	unprocessed_pseudogene		Y	-1	10085614	696
ENSMUSG00000019868	protein_coding	Vta1	ENSMUST00000156398	retained_intron		10	-1	14668261	600
ENSMUSG00000117370	processed_pseudogene	Gm6235	ENSMUST00000235096	processed_pseudogene		18	1	3446814	409
ENSMUSG00000019868	protein_coding	Vta1	ENSMUST00000149485	protein_coding	alternative2	10	-1	14705459	753
ENSMUSG00000015027	protein_coding	Galns	ENSMUST00000211906	processed_transcript		8	-1	122581078	381
ENSMUSG00000028483	protein_coding	Snapc3	ENSMUST00000124856	nonsense_mediated_decay		4	1	83417744	2617
ENSMUSG00000028654	protein_coding	Mycl	ENSMUST00000144998	protein_coding		4	1	122995652	386
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000143047	protein_coding	principal1	4	-1	154025966	3373
ENSMUSG00000097500	antisense	Gm26537	ENSMUST00000181474	antisense		8	1	120643950	652
ENSMUSG00000019868	protein_coding	Vta1	ENSMUST00000133927	nonsense_mediated_decay		10	-1	14684093	301
ENSMUSG00000084948	antisense	1700061H18Rik	ENSMUST00000147221	antisense		18	-1	69969596	564
ENSMUSG00000095032	protein_coding	Gm21310	ENSMUST00000189630	protein_coding	principal1	Y	-1	10147183	1343
ENSMUSG00000002948	protein_coding	Map2k7	ENSMUST00000062686	protein_coding	alternative1	8	1	4238761	3525
ENSMUSG00000084948	antisense	1700061H18Rik	ENSMUST00000139488	antisense		18	-1	69969609	634
ENSMUSG00000095032	protein_coding	Gm21310	ENSMUST00000180130	protein_coding	principal1	Y	-1	10145559	699
ENSMUSG00000033594	protein_coding	Spata2l	ENSMUST00000211845	processed_transcript		8	-1	123236207	1574
ENSMUSG00000117389	processed_pseudogene	Gm50088	ENSMUST00000234592	processed_pseudogene		18	-1	3466502	132
ENSMUSG00000019868	protein_coding	Vta1	ENSMUST00000151805	processed_transcript		10	-1	14705465	475
ENSMUSG00000044457	transcribed_processed_pseudogene	Stk-ps2	ENSMUST00000051224	processed_transcript		1	-1	46030469	4667
ENSMUSG00000028483	protein_coding	Snapc3	ENSMUST00000123262	nonsense_mediated_decay		4	1	83417724	3897
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000207476	retained_intron		7	1	44997680	1797
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000057015	protein_coding	principal2	14	1	14702279	8132
ENSMUSG00000038903	protein_coding	Ccdc68	ENSMUST00000151773	processed_transcript		18	1	69925426	641
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000209006	retained_intron		7	1	44997687	635
ENSMUSG00000096528	TEC	G430049J08Rik	ENSMUST00000179907	TEC		18	1	3471630	2686
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000207555	retained_intron		7	1	44997689	1641
ENSMUSG00000117365	lincRNA	Gm29992	ENSMUST00000234225	lincRNA		18	-1	14331276	831
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000107834	protein_coding	principal1	7	1	44997949	1429
ENSMUSG00000098077	processed_pseudogene	Gm4960	ENSMUST00000182928	processed_pseudogene		5	-1	7400362	1001
ENSMUSG00000028483	protein_coding	Snapc3	ENSMUST00000030206	protein_coding	principal1	4	1	83417724	1405
ENSMUSG00000117469	processed_pseudogene	Gm50089	ENSMUST00000234804	processed_pseudogene		18	1	3484218	452
ENSMUSG00000033594	protein_coding	Spata2l	ENSMUST00000166768	protein_coding	principal1	8	-1	123236233	2707
ENSMUSG00000117365	lincRNA	Gm29992	ENSMUST00000234914	lincRNA		18	-1	14331676	370
ENSMUSG00000099372	lincRNA	Gm28509	ENSMUST00000189428	lincRNA		Y	-1	10154879	2170
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000207521	protein_coding		7	1	44998326	869
ENSMUSG00000028483	protein_coding	Snapc3	ENSMUST00000130676	retained_intron		4	1	83463976	2405
ENSMUSG00000044457	transcribed_processed_pseudogene	Stk-ps2	ENSMUST00000171707	processed_transcript		1	-1	46030437	3483
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000208767	retained_intron		7	1	45000167	774
ENSMUSG00000117605	lincRNA	Gm50097	ENSMUST00000235083	lincRNA		18	1	14331861	412
ENSMUSG00000044457	transcribed_processed_pseudogene	Stk-ps2	ENSMUST00000167676	processed_transcript		1	-1	46030437	3363
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000207128	protein_coding		7	1	45000213	537
ENSMUSG00000044457	transcribed_processed_pseudogene	Stk-ps2	ENSMUST00000187808	transcribed_processed_pseudogene		1	-1	46030246	616
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000208143	retained_intron		7	1	45000501	659
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000125533	protein_coding	principal1	4	-1	154026230	2568
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000207129	protein_coding		7	1	45000733	517
ENSMUSG00000100694	lincRNA	Gm29182	ENSMUST00000191008	lincRNA		Y	1	72271926	1499
ENSMUSG00000033594	protein_coding	Spata2l	ENSMUST00000098327	protein_coding	principal1	8	-1	123236209	2380
ENSMUSG00000074274	lincRNA	D930028M14Rik	ENSMUST00000098678	lincRNA		7	1	25152457	1003
ENSMUSG00000100694	lincRNA	Gm29182	ENSMUST00000187534	lincRNA		Y	1	72272379	438
ENSMUSG00000028654	protein_coding	Mycl	ENSMUST00000106252	protein_coding	principal1	4	1	122995944	3293
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000208958	protein_coding		7	1	45000748	369
ENSMUSG00000074274	lincRNA	D930028M14Rik	ENSMUST00000186424	lincRNA		7	1	25155069	493
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000126119	protein_coding	principal1	4	-1	154026152	3996
ENSMUSG00000055795	processed_pseudogene	Gm5160	ENSMUST00000069552	processed_pseudogene		18	1	14424868	436
ENSMUSG00000033594	protein_coding	Spata2l	ENSMUST00000212818	protein_coding		8	-1	123236226	448
ENSMUSG00000117607	processed_pseudogene	Gm50098	ENSMUST00000234589	processed_pseudogene		18	1	14492005	239
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000221093	retained_intron		12	1	59095799	1629
ENSMUSG00000057193	protein_coding	Slc44a2	ENSMUST00000215528	retained_intron		9	1	21320739	713
ENSMUSG00000003184	protein_coding	Irf3	ENSMUST00000208906	retained_intron		7	1	45001387	629
ENSMUSG00000028654	protein_coding	Mycl	ENSMUST00000030407	protein_coding	principal1	4	1	122996099	3501
ENSMUSG00000057193	protein_coding	Slc44a2	ENSMUST00000215574	nonsense_mediated_decay		9	1	21320739	3428
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000146543	protein_coding		4	-1	154025616	839
ENSMUSG00000043740	protein_coding	B430306N03Rik	ENSMUST00000049614	protein_coding	principal1	17	1	48316141	3996
ENSMUSG00000002948	protein_coding	Map2k7	ENSMUST00000003027	protein_coding		8	1	4238829	1626
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000225496	retained_intron		14	1	14703025	3025
ENSMUSG00000028654	protein_coding	Mycl	ENSMUST00000135925	processed_transcript		4	1	122998880	728
ENSMUSG00000002948	protein_coding	Map2k7	ENSMUST00000110999	protein_coding		8	1	4238829	1578
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000130175	protein_coding	principal1	4	-1	154025867	477
ENSMUSG00000028654	protein_coding	Mycl	ENSMUST00000147259	processed_transcript		4	1	122999339	670
ENSMUSG00000057193	protein_coding	Slc44a2	ENSMUST00000213758	retained_intron		9	1	21320748	1315
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000132541	protein_coding	principal1	4	-1	154025936	490
ENSMUSG00000022286	protein_coding	Grhl2	ENSMUST00000161405	protein_coding		15	1	37233036	1996
ENSMUSG00000002948	protein_coding	Map2k7	ENSMUST00000110994	protein_coding		8	1	4240105	1600
ENSMUSG00000057193	protein_coding	Slc44a2	ENSMUST00000034697	protein_coding	principal2	9	1	21337828	3456
ENSMUSG00000002948	protein_coding	Map2k7	ENSMUST00000110995	protein_coding		8	1	4240105	1558
ENSMUSG00000056598	protein_coding	Drc3	ENSMUST00000070805	protein_coding	alternative2	11	1	60353329	2061
ENSMUSG00000021532	protein_coding	Fastkd3	ENSMUST00000222660	protein_coding		13	1	68582234	304
ENSMUSG00000019787	protein_coding	Trdn	ENSMUST00000095762	protein_coding	principal2	10	1	33083483	4514
ENSMUSG00000002948	protein_coding	Map2k7	ENSMUST00000110996	protein_coding		8	1	4243264	1188
ENSMUSG00000004207	protein_coding	Psap	ENSMUST00000179238	protein_coding	principal3	10	1	60277628	2657
ENSMUSG00000057193	protein_coding	Slc44a2	ENSMUST00000213499	retained_intron		9	1	21344882	3744
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000145527	protein_coding	principal1	4	-1	154024355	562
ENSMUSG00000002948	protein_coding	Map2k7	ENSMUST00000129866	protein_coding		8	1	4244457	760
ENSMUSG00000019787	protein_coding	Trdn	ENSMUST00000218281	protein_coding		10	1	33083536	356
ENSMUSG00000043740	protein_coding	B430306N03Rik	ENSMUST00000129825	nonsense_mediated_decay		17	1	48316409	994
ENSMUSG00000057193	protein_coding	Slc44a2	ENSMUST00000216266	retained_intron		9	1	21345593	515
ENSMUSG00000057193	protein_coding	Slc44a2	ENSMUST00000217453	retained_intron		9	1	21346984	4077
ENSMUSG00000069814	protein_coding	Ccdc92b	ENSMUST00000100866	protein_coding	principal1	11	1	74619605	4002
ENSMUSG00000002948	protein_coding	Map2k7	ENSMUST00000129537	retained_intron		8	1	4244637	934
ENSMUSG00000019787	protein_coding	Trdn	ENSMUST00000217779	protein_coding	alternative2	10	1	33083540	1182
ENSMUSG00000019787	protein_coding	Trdn	ENSMUST00000219665	protein_coding		10	1	33083560	1023
ENSMUSG00000043740	protein_coding	B430306N03Rik	ENSMUST00000124205	retained_intron		17	1	48316424	1543
ENSMUSG00000002948	protein_coding	Map2k7	ENSMUST00000207247	processed_transcript		8	1	4246673	324
ENSMUSG00000057193	protein_coding	Slc44a2	ENSMUST00000214268	protein_coding		9	1	21347920	684
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000146054	protein_coding	principal1	4	-1	154026150	707
ENSMUSG00000019787	protein_coding	Trdn	ENSMUST00000219931	protein_coding	alternative2	10	1	33083561	1088
ENSMUSG00000083717	processed_pseudogene	Gm13865	ENSMUST00000120957	processed_pseudogene		3	-1	109192867	865
ENSMUSG00000021532	protein_coding	Fastkd3	ENSMUST00000222068	processed_transcript		13	1	68582246	1120
ENSMUSG00000108685	TEC	Gm45149	ENSMUST00000206459	TEC		7	-1	17799996	2172
ENSMUSG00000019787	protein_coding	Trdn	ENSMUST00000219211	protein_coding		10	1	33195968	614
ENSMUSG00000019787	protein_coding	Trdn	ENSMUST00000219000	retained_intron		10	1	33198705	1665
ENSMUSG00000038903	protein_coding	Ccdc68	ENSMUST00000043929	protein_coding	principal2	18	1	69925466	1618
ENSMUSG00000057193	protein_coding	Slc44a2	ENSMUST00000213535	protein_coding		9	1	21348363	679
ENSMUSG00000111980	processed_pseudogene	Gm20304	ENSMUST00000218168	processed_pseudogene		10	1	33463905	444
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000131325	protein_coding		4	-1	154026037	842
ENSMUSG00000112521	processed_pseudogene	Gm29884	ENSMUST00000218403	processed_pseudogene		10	1	33412076	453
ENSMUSG00000060467	processed_pseudogene	Gm10080	ENSMUST00000075585	processed_pseudogene		9	-1	44375181	438
ENSMUSG00000056598	protein_coding	Drc3	ENSMUST00000094140	protein_coding	alternative2	11	1	60353329	2438
ENSMUSG00000038903	protein_coding	Ccdc68	ENSMUST00000135428	processed_transcript		18	1	69925570	762
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000146426	protein_coding		4	-1	154025663	353
ENSMUSG00000038903	protein_coding	Ccdc68	ENSMUST00000080050	protein_coding	alternative2	18	1	69925576	1235
ENSMUSG00000063216	protein_coding	Olfr1351	ENSMUST00000216030	protein_coding	principal1	10	1	79012472	2489
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000139569	protein_coding		4	-1	154024323	421
ENSMUSG00000110252	processed_pseudogene	Gm2961	ENSMUST00000211074	processed_pseudogene		8	-1	62194212	772
ENSMUSG00000109687	processed_pseudogene	Hspd1-ps2	ENSMUST00000210003	processed_pseudogene		8	-1	62488488	1697
ENSMUSG00000078350	protein_coding	Smim1	ENSMUST00000126624	processed_transcript		4	-1	154025912	372
ENSMUSG00000020823	protein_coding	Sec14l1	ENSMUST00000021177	protein_coding	principal3	11	1	117115172	2866
ENSMUSG00000003190	protein_coding	Bcl2l12	ENSMUST00000003290	protein_coding	principal2	7	-1	44997579	1075
ENSMUSG00000109895	processed_pseudogene	Gm2975	ENSMUST00000209710	processed_pseudogene		8	1	62539650	820
ENSMUSG00000047824	protein_coding	Pygo2	ENSMUST00000136573	processed_transcript		3	1	89430214	584
ENSMUSG00000063216	protein_coding	Olfr1351	ENSMUST00000080730	protein_coding	principal1	10	1	79017324	960
ENSMUSG00000109740	processed_pseudogene	Gm7561	ENSMUST00000211203	processed_pseudogene		8	-1	62547831	886
ENSMUSG00000112732	lincRNA	Gm47343	ENSMUST00000219714	lincRNA		10	-1	79012892	711
ENSMUSG00000109767	lincRNA	Gm45460	ENSMUST00000211385	lincRNA		8	-1	62634645	1038
ENSMUSG00000023185	protein_coding	Ceacam14	ENSMUST00000023953	protein_coding	principal1	7	1	17812633	1109
ENSMUSG00000025165	protein_coding	Sectm1a	ENSMUST00000106119	protein_coding	alternative2	11	-1	121081139	1302
ENSMUSG00000110364	lincRNA	Gm45462	ENSMUST00000211267	lincRNA		8	1	62749686	792
ENSMUSG00000109994	lincRNA	Gm45459	ENSMUST00000209882	lincRNA		8	-1	62855382	442
ENSMUSG00000046493	protein_coding	Olfr1352	ENSMUST00000058991	protein_coding	principal1	10	1	78981050	4356
ENSMUSG00000059900	protein_coding	Tmem40	ENSMUST00000112946	protein_coding	alternative2	6	-1	115759271	1554
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000225232	protein_coding		14	1	14703065	2964
ENSMUSG00000003190	protein_coding	Bcl2l12	ENSMUST00000208128	retained_intron		7	-1	44998712	1596
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000224197	retained_intron		14	1	14703068	679
ENSMUSG00000047824	protein_coding	Pygo2	ENSMUST00000060061	protein_coding	principal1	3	1	89430261	3198
ENSMUSG00000022526	protein_coding	Zfp251	ENSMUST00000080406	protein_coding	principal1	15	-1	76871435	4036
ENSMUSG00000046493	protein_coding	Olfr1352	ENSMUST00000203973	protein_coding		10	1	78981115	576
ENSMUSG00000047824	protein_coding	Pygo2	ENSMUST00000146037	processed_transcript		3	1	89430424	456
ENSMUSG00000078793	protein_coding	Gm5155	ENSMUST00000072381	protein_coding	principal1	7	1	17871767	3610
ENSMUSG00000003190	protein_coding	Bcl2l12	ENSMUST00000207755	protein_coding	alternative2	7	-1	44997562	605
ENSMUSG00000047824	protein_coding	Pygo2	ENSMUST00000133680	processed_transcript		3	1	89430740	382
ENSMUSG00000003190	protein_coding	Bcl2l12	ENSMUST00000207213	retained_intron		7	-1	44997551	949
ENSMUSG00000109975	transcribed_unprocessed_pseudogene	Gm19196	ENSMUST00000210709	processed_transcript		12	1	21543307	321
ENSMUSG00000022526	protein_coding	Zfp251	ENSMUST00000230315	processed_transcript		15	-1	76871408	3337
ENSMUSG00000022526	protein_coding	Zfp251	ENSMUST00000229494	protein_coding		15	-1	76871417	2855
ENSMUSG00000003190	protein_coding	Bcl2l12	ENSMUST00000207443	protein_coding		7	-1	44997545	537
ENSMUSG00000109975	transcribed_unprocessed_pseudogene	Gm19196	ENSMUST00000211164	processed_transcript		12	1	21543307	363
ENSMUSG00000025165	protein_coding	Sectm1a	ENSMUST00000026162	protein_coding	principal2	11	-1	121081220	1692
ENSMUSG00000109975	transcribed_unprocessed_pseudogene	Gm19196	ENSMUST00000209258	transcribed_unprocessed_pseudogene		12	1	21545309	357
ENSMUSG00000020823	protein_coding	Sec14l1	ENSMUST00000103026	protein_coding	alternative2	11	1	117115238	2589
ENSMUSG00000022526	protein_coding	Zfp251	ENSMUST00000230524	retained_intron		15	-1	76870985	579
ENSMUSG00000022286	protein_coding	Grhl2	ENSMUST00000022895	protein_coding	principal1	15	1	37233036	4947
ENSMUSG00000003190	protein_coding	Bcl2l12	ENSMUST00000207342	protein_coding		7	-1	44997253	520
ENSMUSG00000047824	protein_coding	Pygo2	ENSMUST00000107413	protein_coding		3	1	89430837	2911
ENSMUSG00000111088	TEC	9430081H08Rik	ENSMUST00000217460	TEC		9	-1	44379450	818
ENSMUSG00000033961	protein_coding	Zfp446	ENSMUST00000108537	protein_coding	alternative2	7	1	12977848	2178
ENSMUSG00000087138	antisense	Gm15545	ENSMUST00000141011	antisense		7	1	44986900	899
ENSMUSG00000020823	protein_coding	Sec14l1	ENSMUST00000090433	protein_coding	alternative2	11	1	117115238	4654
ENSMUSG00000022286	protein_coding	Grhl2	ENSMUST00000161532	protein_coding		15	1	37233058	632
ENSMUSG00000022286	protein_coding	Grhl2	ENSMUST00000228589	retained_intron		15	1	37285593	3320
ENSMUSG00000087138	antisense	Gm15545	ENSMUST00000150613	antisense		7	1	44986927	1059
ENSMUSG00000025165	protein_coding	Sectm1a	ENSMUST00000100126	protein_coding	alternative2	11	-1	121081136	680
ENSMUSG00000020823	protein_coding	Sec14l1	ENSMUST00000146585	processed_transcript		11	1	117115252	1047
ENSMUSG00000047824	protein_coding	Pygo2	ENSMUST00000125830	processed_transcript		3	1	89431032	688
ENSMUSG00000087138	antisense	Gm15545	ENSMUST00000123517	antisense		7	1	44986934	593
ENSMUSG00000025165	protein_coding	Sectm1a	ENSMUST00000106120	protein_coding	alternative2	11	-1	121081130	1020
ENSMUSG00000031553	protein_coding	Adam3	ENSMUST00000033958	protein_coding	principal1	8	-1	24725852	2743
ENSMUSG00000087138	antisense	Gm15545	ENSMUST00000152595	antisense		7	1	44986973	704
ENSMUSG00000020823	protein_coding	Sec14l1	ENSMUST00000153437	retained_intron		11	1	117155069	518
ENSMUSG00000022286	protein_coding	Grhl2	ENSMUST00000161933	processed_transcript		15	1	37318403	3617
ENSMUSG00000025165	protein_coding	Sectm1a	ENSMUST00000149917	processed_transcript		11	-1	121081125	454
ENSMUSG00000022286	protein_coding	Grhl2	ENSMUST00000159221	protein_coding		15	1	37335737	717
ENSMUSG00000105277	processed_pseudogene	Gm9504	ENSMUST00000196322	processed_pseudogene		3	-1	106043431	468
ENSMUSG00000056598	protein_coding	Drc3	ENSMUST00000108723	protein_coding	principal2	11	1	60353329	1917
ENSMUSG00000089811	processed_pseudogene	Gm16138	ENSMUST00000159341	processed_pseudogene		15	-1	37332809	821
ENSMUSG00000071644	protein_coding	Eef1g	ENSMUST00000052248	protein_coding	principal1	19	1	8967041	1864
ENSMUSG00000094775	unprocessed_pseudogene	Gm2759	ENSMUST00000179938	unprocessed_pseudogene		X	-1	24969751	639
ENSMUSG00000082188	unprocessed_pseudogene	Gm2768	ENSMUST00000121062	unprocessed_pseudogene		X	-1	25115171	250
ENSMUSG00000056598	protein_coding	Drc3	ENSMUST00000128905	processed_transcript		11	1	60353357	668
ENSMUSG00000027345	lincRNA	4921508D12Rik	ENSMUST00000124095	lincRNA		2	1	132424741	1075
ENSMUSG00000057564	protein_coding	Olfr1508	ENSMUST00000206520	protein_coding	principal1	14	-1	52467495	5791
ENSMUSG00000056598	protein_coding	Drc3	ENSMUST00000108722	protein_coding	alternative2	11	1	60353380	1858
ENSMUSG00000057564	protein_coding	Olfr1508	ENSMUST00000205811	protein_coding		14	-1	52467090	605
ENSMUSG00000029028	protein_coding	Lrrc47	ENSMUST00000169622	protein_coding	alternative2	4	1	154011731	3468
ENSMUSG00000105051	processed_pseudogene	Gm4248	ENSMUST00000196905	processed_pseudogene		3	1	106091034	316
ENSMUSG00000031553	protein_coding	Adam3	ENSMUST00000170318	nonsense_mediated_decay		8	-1	24725798	2606
ENSMUSG00000086379	antisense	1700026D11Rik	ENSMUST00000151417	antisense		2	1	132490634	789
ENSMUSG00000029028	protein_coding	Lrrc47	ENSMUST00000142794	retained_intron		4	1	154017414	378
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000081728	protein_coding	principal2	15	1	30172593	5944
ENSMUSG00000105343	processed_pseudogene	Gm43512	ENSMUST00000198495	processed_pseudogene		14	-1	52483060	176
ENSMUSG00000029028	protein_coding	Lrrc47	ENSMUST00000167947	protein_coding		4	1	154018953	808
ENSMUSG00000031553	protein_coding	Adam3	ENSMUST00000171611	protein_coding		8	-1	24725788	1202
ENSMUSG00000021532	protein_coding	Fastkd3	ENSMUST00000051784	protein_coding	principal1	13	1	68582248	2421
ENSMUSG00000025171	protein_coding	Ubtd1	ENSMUST00000026170	protein_coding	principal1	19	1	41981763	1529
ENSMUSG00000071644	protein_coding	Eef1g	ENSMUST00000122932	processed_transcript		19	1	8967570	706
ENSMUSG00000029028	protein_coding	Lrrc47	ENSMUST00000163672	protein_coding		4	1	154019639	478
ENSMUSG00000071644	protein_coding	Eef1g	ENSMUST00000127480	retained_intron		19	1	8968216	504
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000226116	nonsense_mediated_decay		15	1	30172967	861
ENSMUSG00000071644	protein_coding	Eef1g	ENSMUST00000152076	retained_intron		19	1	8968216	724
ENSMUSG00000021532	protein_coding	Fastkd3	ENSMUST00000222631	protein_coding		13	1	68582263	610
ENSMUSG00000071644	protein_coding	Eef1g	ENSMUST00000128626	processed_transcript		19	1	8968216	803
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000223981	protein_coding		14	1	14703079	3968
ENSMUSG00000025171	protein_coding	Ubtd1	ENSMUST00000237817	processed_transcript		19	1	42017149	493
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000223607	protein_coding		14	1	14703079	4037
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000227857	processed_transcript		15	1	30172991	486
ENSMUSG00000086379	antisense	1700026D11Rik	ENSMUST00000130884	antisense		2	1	132490716	417
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000226119	protein_coding	alternative2	15	1	30173051	4111
ENSMUSG00000071644	protein_coding	Eef1g	ENSMUST00000135025	retained_intron		19	1	8972404	1272
ENSMUSG00000086379	antisense	1700026D11Rik	ENSMUST00000126910	antisense		2	1	132490716	2033
ENSMUSG00000029028	protein_coding	Lrrc47	ENSMUST00000030894	protein_coding	principal2	4	1	154011803	3395
ENSMUSG00000045410	protein_coding	Akr1e1	ENSMUST00000091848	protein_coding	principal1	13	-1	4609174	3463
ENSMUSG00000083137	processed_pseudogene	Gm11792	ENSMUST00000120640	processed_pseudogene		11	-1	121092559	168
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000226797	retained_intron		15	1	30173138	731
ENSMUSG00000021532	protein_coding	Fastkd3	ENSMUST00000223187	protein_coding		13	1	68582263	764
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000228695	retained_intron		15	1	30457673	436
ENSMUSG00000045410	protein_coding	Akr1e1	ENSMUST00000110691	protein_coding		13	-1	4609174	3288
ENSMUSG00000086379	antisense	1700026D11Rik	ENSMUST00000154067	antisense		2	1	132490728	847
ENSMUSG00000086379	antisense	1700026D11Rik	ENSMUST00000146398	antisense		2	1	132490744	569
ENSMUSG00000086379	antisense	1700026D11Rik	ENSMUST00000144501	antisense		2	1	132490744	535
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000228282	protein_coding		15	1	30457675	847
ENSMUSG00000086250	lincRNA	Gm14095	ENSMUST00000134264	lincRNA		2	-1	132501148	516
ENSMUSG00000045410	protein_coding	Akr1e1	ENSMUST00000131982	processed_transcript		13	-1	4609134	412
ENSMUSG00000004207	protein_coding	Psap	ENSMUST00000177779	protein_coding	alternative2	10	1	60277628	2657
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000142541	protein_coding		8	1	123062942	809
ENSMUSG00000021532	protein_coding	Fastkd3	ENSMUST00000223319	nonsense_mediated_decay		13	1	68582263	2501
ENSMUSG00000045410	protein_coding	Akr1e1	ENSMUST00000220936	processed_transcript		13	-1	4609118	321
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000225238	protein_coding		14	1	14703079	3761
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000227004	processed_transcript		15	1	30457788	476
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000020496	protein_coding	principal1	10	-1	77418265	6549
ENSMUSG00000037578	protein_coding	Pkd2l1	ENSMUST00000042026	protein_coding	principal1	19	-1	44192442	3321
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000228753	retained_intron		15	1	30646532	2506
ENSMUSG00000059887	protein_coding	Olfr1507	ENSMUST00000206062	protein_coding	principal1	14	-1	52495749	2803
ENSMUSG00000021532	protein_coding	Fastkd3	ENSMUST00000221006	retained_intron		13	1	68582276	5134
ENSMUSG00000033961	protein_coding	Zfp446	ENSMUST00000108535	protein_coding		7	1	12977848	2594
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000227065	retained_intron		15	1	30683159	660
ENSMUSG00000031553	protein_coding	Adam3	ENSMUST00000170740	processed_transcript		8	-1	24725785	452
ENSMUSG00000021532	protein_coding	Fastkd3	ENSMUST00000222685	nonsense_mediated_decay		13	1	68584824	422
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000223761	protein_coding		14	1	14703079	4070
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000225175	protein_coding		14	1	14703079	3923
ENSMUSG00000031553	protein_coding	Adam3	ENSMUST00000168662	processed_transcript		8	-1	24725800	443
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000227029	retained_intron		15	1	31004796	488
ENSMUSG00000059887	protein_coding	Olfr1507	ENSMUST00000073571	protein_coding	principal1	14	-1	52491046	1112
ENSMUSG00000023992	protein_coding	Trem2	ENSMUST00000024791	protein_coding	principal3	17	1	48346401	1088
ENSMUSG00000022240	protein_coding	Ctnnd2	ENSMUST00000228827	retained_intron		15	1	31026396	2014
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000224222	protein_coding		14	1	14703079	4052
ENSMUSG00000021532	protein_coding	Fastkd3	ENSMUST00000221640	protein_coding		13	1	68590124	460
ENSMUSG00000112985	antisense	Gm48556	ENSMUST00000223128	antisense		13	-1	68594722	454
ENSMUSG00000115012	antisense	9630009A06Rik	ENSMUST00000228332	antisense		15	-1	30962878	813
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000182768	lincRNA		14	-1	61682373	1442
ENSMUSG00000059887	protein_coding	Olfr1507	ENSMUST00000206069	protein_coding		14	-1	52495297	454
ENSMUSG00000115073	TEC	Gm49283	ENSMUST00000226263	TEC		15	1	30428844	1390
ENSMUSG00000001440	protein_coding	Kpnb1	ENSMUST00000001479	protein_coding	principal1	11	-1	97187881	5894
ENSMUSG00000023992	protein_coding	Trem2	ENSMUST00000132340	retained_intron		17	1	48346440	4784
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000225630	protein_coding	alternative2	14	1	14703079	3663
ENSMUSG00000037578	protein_coding	Pkd2l1	ENSMUST00000161357	retained_intron		19	-1	44192442	3529
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000225979	protein_coding		14	1	14703079	3723
ENSMUSG00000059887	protein_coding	Olfr1507	ENSMUST00000205963	protein_coding		14	-1	52495325	606
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000226079	protein_coding	alternative2	14	1	14703079	3594
ENSMUSG00000115337	antisense	4930570B17Rik	ENSMUST00000228499	antisense		15	-1	30626621	1221
ENSMUSG00000031553	protein_coding	Adam3	ENSMUST00000166986	processed_transcript		8	-1	24725797	453
ENSMUSG00000086824	antisense	4930448D08Rik	ENSMUST00000149958	antisense		18	1	69969677	1247
ENSMUSG00000023992	protein_coding	Trem2	ENSMUST00000113237	protein_coding	alternative2	17	1	48346488	1056
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000224952	protein_coding		14	1	14718784	7297
ENSMUSG00000001440	protein_coding	Kpnb1	ENSMUST00000132633	retained_intron		11	-1	97164222	643
ENSMUSG00000059887	protein_coding	Olfr1507	ENSMUST00000206931	protein_coding		14	-1	52495689	571
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000182259	lincRNA		14	-1	61682314	1437
ENSMUSG00000031553	protein_coding	Adam3	ENSMUST00000167703	nonsense_mediated_decay		8	-1	24725788	452
ENSMUSG00000023992	protein_coding	Trem2	ENSMUST00000148545	processed_transcript		17	1	48346489	526
ENSMUSG00000038020	protein_coding	Rapgefl1	ENSMUST00000107479	protein_coding	principal1	11	1	98836785	4855
ENSMUSG00000001440	protein_coding	Kpnb1	ENSMUST00000153727	retained_intron		11	-1	97165400	779
ENSMUSG00000084853	lincRNA	Gm11791	ENSMUST00000139327	lincRNA		11	-1	121097207	336
ENSMUSG00000031553	protein_coding	Adam3	ENSMUST00000169598	nonsense_mediated_decay		8	-1	24725782	437
ENSMUSG00000031553	protein_coding	Adam3	ENSMUST00000171438	protein_coding	principal1	8	-1	24725788	2501
ENSMUSG00000082510	processed_pseudogene	Gm11793	ENSMUST00000120433	processed_pseudogene		11	-1	121107127	981
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000183066	lincRNA		14	-1	61682302	788
ENSMUSG00000049625	protein_coding	Tifab	ENSMUST00000169652	protein_coding	principal1	13	-1	56178801	3349
ENSMUSG00000096620	protein_coding	Gm5169	ENSMUST00000096469	protein_coding	principal1	X	-1	25301455	890
ENSMUSG00000090722	sense_intronic	Gm8378	ENSMUST00000165070	sense_intronic		12	-1	91686068	517
ENSMUSG00000059900	protein_coding	Tmem40	ENSMUST00000127728	processed_transcript		6	-1	115734951	894
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000183054	lincRNA		14	-1	61648822	722
ENSMUSG00000033961	protein_coding	Zfp446	ENSMUST00000045810	protein_coding	principal3	7	1	12977848	4615
ENSMUSG00000106131	processed_pseudogene	Gm36382	ENSMUST00000198892	processed_pseudogene		14	-1	52509082	541
ENSMUSG00000110225	TEC	Gm45528	ENSMUST00000209854	TEC		8	1	24711406	3145
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000182325	lincRNA		14	-1	61648787	463
ENSMUSG00000090722	sense_intronic	Gm8378	ENSMUST00000172047	sense_intronic		12	-1	91686113	1127
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000191650	TEC		14	-1	61619751	1557
ENSMUSG00000090722	sense_intronic	Gm8378	ENSMUST00000167777	sense_intronic		12	-1	91686113	2624
ENSMUSG00000037263	protein_coding	Aldh3b3	ENSMUST00000179433	protein_coding	principal1	19	1	3958645	3827
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000098374	protein_coding		10	-1	77418270	6584
ENSMUSG00000033961	protein_coding	Zfp446	ENSMUST00000147996	retained_intron		7	1	12977893	3261
ENSMUSG00000109877	antisense	Gm45609	ENSMUST00000209837	antisense		2	1	155074181	1207
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000223695	protein_coding		14	1	14718825	3851
ENSMUSG00000109877	antisense	Gm45609	ENSMUST00000209333	antisense		2	1	155074185	860
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000224333	protein_coding		14	1	14718825	4097
ENSMUSG00000033961	protein_coding	Zfp446	ENSMUST00000108536	protein_coding	alternative2	7	1	12978238	3705
ENSMUSG00000109877	antisense	Gm45609	ENSMUST00000209399	antisense		2	1	155081320	1011
ENSMUSG00000109877	antisense	Gm45609	ENSMUST00000211423	antisense		2	1	155081339	955
ENSMUSG00000059900	protein_coding	Tmem40	ENSMUST00000151849	retained_intron		6	-1	115735293	927
ENSMUSG00000109877	antisense	Gm45609	ENSMUST00000209674	antisense		2	1	155081347	1046
ENSMUSG00000109877	antisense	Gm45609	ENSMUST00000210176	antisense		2	1	155081525	1023
ENSMUSG00000109877	antisense	Gm45609	ENSMUST00000211194	antisense		2	1	155082181	913
ENSMUSG00000096724	unprocessed_pseudogene	Gm1989	ENSMUST00000126244	unprocessed_pseudogene		X	-1	25380281	636
ENSMUSG00000109877	antisense	Gm45609	ENSMUST00000210144	antisense		2	1	155095744	1288
ENSMUSG00000049625	protein_coding	Tifab	ENSMUST00000225063	protein_coding	principal1	13	-1	56178885	2718
ENSMUSG00000033961	protein_coding	Zfp446	ENSMUST00000128427	retained_intron		7	1	12979520	3540
ENSMUSG00000031150	protein_coding	Ccdc120	ENSMUST00000033490	protein_coding	principal1	X	-1	7741341	3658
ENSMUSG00000086689	antisense	Gm16876	ENSMUST00000151945	antisense		12	1	91684665	760
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000180377	lincRNA		14	-1	61682325	1165
ENSMUSG00000003955	protein_coding	Fam162a	ENSMUST00000004057	protein_coding	principal1	16	-1	36071515	718
ENSMUSG00000053740	processed_pseudogene	Gm6457	ENSMUST00000066378	processed_pseudogene		18	1	14570147	492
ENSMUSG00000038020	protein_coding	Rapgefl1	ENSMUST00000037640	retained_intron		11	1	98845086	1237
ENSMUSG00000114341	processed_pseudogene	Gm47104	ENSMUST00000225940	processed_pseudogene		13	-1	56202937	707
ENSMUSG00000022305	protein_coding	Lrp12	ENSMUST00000022916	protein_coding	principal3	15	-1	39943788	4109
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000223740	protein_coding		14	1	14718825	3831
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000183079	lincRNA		14	-1	61648762	535
ENSMUSG00000038020	protein_coding	Rapgefl1	ENSMUST00000139889	retained_intron		11	1	98850332	2077
ENSMUSG00000037263	protein_coding	Aldh3b3	ENSMUST00000189124	nonsense_mediated_decay		19	1	3958806	4013
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000224672	protein_coding		14	1	14718825	4053
ENSMUSG00000031150	protein_coding	Ccdc120	ENSMUST00000224502	protein_coding		X	-1	7733904	1003
ENSMUSG00000101844	unprocessed_pseudogene	Gm20844	ENSMUST00000186101	unprocessed_pseudogene		Y	-1	72383247	654
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000224049	protein_coding		14	1	14718825	3792
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000193208	TEC		14	-1	61631892	4098
ENSMUSG00000039337	protein_coding	Tex19.2	ENSMUST00000039146	protein_coding	principal1	11	-1	121118677	2046
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000224752	protein_coding		14	1	14718825	4265
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000183245	lincRNA		14	-1	61682325	637
ENSMUSG00000022305	protein_coding	Lrp12	ENSMUST00000110305	protein_coding	alternative1	15	-1	39943994	4244
ENSMUSG00000037263	protein_coding	Aldh3b3	ENSMUST00000025794	protein_coding		19	1	3965900	896
ENSMUSG00000031150	protein_coding	Ccdc120	ENSMUST00000128289	protein_coding		X	-1	7740210	395
ENSMUSG00000034187	protein_coding	Nsf	ENSMUST00000103075	protein_coding	principal1	11	-1	103954056	3766
ENSMUSG00000003955	protein_coding	Fam162a	ENSMUST00000231351	protein_coding		16	-1	36071369	640
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000225078	retained_intron		14	1	14739736	484
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000223771	nonsense_mediated_decay		14	1	14748474	426
ENSMUSG00000022305	protein_coding	Lrp12	ENSMUST00000228575	nonsense_mediated_decay		15	-1	39943690	806
ENSMUSG00000003955	protein_coding	Fam162a	ENSMUST00000232390	processed_transcript		16	-1	36052394	463
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000182756	lincRNA		14	-1	61648622	3530
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000120187	protein_coding	alternative1	7	-1	130266263	4311
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000225508	retained_intron		14	1	14757334	761
ENSMUSG00000003955	protein_coding	Fam162a	ENSMUST00000231379	processed_transcript		16	-1	36071594	318
ENSMUSG00000022305	protein_coding	Lrp12	ENSMUST00000146714	retained_intron		15	-1	39943706	433
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000224750	retained_intron		14	1	14763767	3401
ENSMUSG00000081226	processed_pseudogene	Gm8802	ENSMUST00000118633	processed_pseudogene		5	1	7857108	740
ENSMUSG00000031150	protein_coding	Ccdc120	ENSMUST00000153925	processed_transcript		X	-1	7741308	343
ENSMUSG00000021733	protein_coding	Slc4a7	ENSMUST00000225613	retained_intron		14	1	14785927	2378
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000180917	lincRNA		14	-1	61648822	3544
ENSMUSG00000031150	protein_coding	Ccdc120	ENSMUST00000128011	processed_transcript		X	-1	7740231	264
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000182286	lincRNA		14	-1	61682314	666
ENSMUSG00000059900	protein_coding	Tmem40	ENSMUST00000170625	protein_coding	alternative2	6	-1	115762410	843
ENSMUSG00000034379	protein_coding	Wdr5b	ENSMUST00000042203	protein_coding	principal1	16	1	36041190	2739
ENSMUSG00000034187	protein_coding	Nsf	ENSMUST00000146036	retained_intron		11	-1	103827431	612
ENSMUSG00000105068	lincRNA	Gm30835	ENSMUST00000198825	lincRNA		5	-1	7960346	689
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000124096	protein_coding		7	-1	133123350	2425
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000182537	lincRNA		14	-1	61682313	318
ENSMUSG00000034187	protein_coding	Nsf	ENSMUST00000040443	retained_intron		11	-1	103824100	688
ENSMUSG00000104624	processed_pseudogene	Gm43478	ENSMUST00000200381	processed_pseudogene		5	1	7923833	292
ENSMUSG00000004207	protein_coding	Psap	ENSMUST00000004316	protein_coding	alternative2	10	1	60277628	2654
ENSMUSG00000081595	processed_pseudogene	Gm13036	ENSMUST00000117799	processed_pseudogene		4	1	146058776	748
ENSMUSG00000097589	processed_transcript	Dleu2	ENSMUST00000182957	lincRNA		14	-1	61682325	352
ENSMUSG00000031150	protein_coding	Ccdc120	ENSMUST00000128852	processed_transcript		X	-1	7741324	372
ENSMUSG00000101699	unprocessed_pseudogene	Gm28508	ENSMUST00000188016	unprocessed_pseudogene		Y	-1	10278393	696
ENSMUSG00000031150	protein_coding	Ccdc120	ENSMUST00000156787	processed_transcript		X	-1	7740207	207
ENSMUSG00000082195	processed_pseudogene	Gm13034	ENSMUST00000121342	processed_pseudogene		4	1	146067752	3177
ENSMUSG00000034187	protein_coding	Nsf	ENSMUST00000127813	retained_intron		11	-1	103872200	659
ENSMUSG00000031150	protein_coding	Ccdc120	ENSMUST00000154977	processed_transcript		X	-1	7750905	372
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000105404	nonsense_mediated_decay		10	-1	77418227	6557
ENSMUSG00000106478	antisense	Gm36551	ENSMUST00000196787	antisense		5	1	137857045	300
ENSMUSG00000031150	protein_coding	Ccdc120	ENSMUST00000139499	processed_transcript		X	-1	7750897	368
ENSMUSG00000104482	lincRNA	Gm38064	ENSMUST00000194032	lincRNA		1	1	188246140	444
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000144547	nonsense_mediated_decay		10	-1	77418270	6630
ENSMUSG00000059900	protein_coding	Tmem40	ENSMUST00000166254	protein_coding	principal3	6	-1	115762365	811
ENSMUSG00000083733	processed_pseudogene	Gm13035	ENSMUST00000117496	processed_pseudogene		4	-1	146073598	342
ENSMUSG00000034187	protein_coding	Nsf	ENSMUST00000150516	retained_intron		11	-1	103872322	671
ENSMUSG00000026069	protein_coding	Il1rl1	ENSMUST00000174335	protein_coding		1	1	40429570	1216
ENSMUSG00000073267	protein_coding	Gm1993	ENSMUST00000120268	protein_coding	principal1	X	-1	25570452	1131
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000105406	protein_coding		10	-1	77418270	6662
ENSMUSG00000030538	protein_coding	Cib1	ENSMUST00000065163	protein_coding	principal1	7	-1	80232813	1047
ENSMUSG00000026069	protein_coding	Il1rl1	ENSMUST00000173881	protein_coding		1	1	40436589	375
ENSMUSG00000025202	protein_coding	Scd3	ENSMUST00000026220	protein_coding	principal1	19	1	44203269	3489
ENSMUSG00000059900	protein_coding	Tmem40	ENSMUST00000072933	protein_coding	principal3	6	-1	115758999	1272
ENSMUSG00000110559	lincRNA	Gm26843	ENSMUST00000212304	lincRNA		8	-1	93687958	2859
ENSMUSG00000024232	protein_coding	Bambi	ENSMUST00000025075	protein_coding	principal1	18	1	3507923	5074
ENSMUSG00000066684	protein_coding	Pilrb1	ENSMUST00000197403	retained_intron		5	-1	137853250	448
ENSMUSG00000030538	protein_coding	Cib1	ENSMUST00000206084	protein_coding		7	-1	80232565	772
ENSMUSG00000025202	protein_coding	Scd3	ENSMUST00000237324	protein_coding		19	1	44237815	655
ENSMUSG00000117900	antisense	Gm50323	ENSMUST00000236516	antisense		19	-1	44246570	2268
ENSMUSG00000116988	protein_coding	Gm49673	ENSMUST00000232307	nonsense_mediated_decay	principal1	17	-1	8147788	2610
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000149738	retained_intron		10	-1	77418211	2584
ENSMUSG00000066684	protein_coding	Pilrb1	ENSMUST00000197914	nonsense_mediated_decay		5	-1	137854950	459
ENSMUSG00000079339	protein_coding	Ifit1bl1	ENSMUST00000112467	protein_coding	principal5	19	-1	34599327	2193
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000154607	retained_intron		10	-1	77418265	2577
ENSMUSG00000110713	lincRNA	Gm30606	ENSMUST00000212801	lincRNA		8	-1	93719975	847
ENSMUSG00000021171	protein_coding	Esyt2	ENSMUST00000100986	protein_coding	principal1	12	1	116281196	5560
ENSMUSG00000030538	protein_coding	Cib1	ENSMUST00000071457	protein_coding		7	-1	80232624	702
ENSMUSG00000066684	protein_coding	Pilrb1	ENSMUST00000198703	protein_coding		5	-1	137857376	443
ENSMUSG00000110672	TEC	Gm45786	ENSMUST00000213021	TEC		8	-1	93749852	2278
ENSMUSG00000097361	lincRNA	4930550C17Rik	ENSMUST00000181629	lincRNA		13	-1	56243940	1411
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000156583	retained_intron		10	-1	77418217	704
ENSMUSG00000079339	protein_coding	Ifit1bl1	ENSMUST00000168254	protein_coding	alternative2	19	-1	34601956	2200
ENSMUSG00000095242	protein_coding	Gm20834	ENSMUST00000185576	protein_coding	principal1	Y	-1	10324589	1220
ENSMUSG00000095242	protein_coding	Gm20834	ENSMUST00000179558	protein_coding	principal1	Y	-1	10323434	684
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000150227	retained_intron		10	-1	77418238	3289
ENSMUSG00000021171	protein_coding	Esyt2	ENSMUST00000220816	protein_coding	principal1	12	1	116281222	4287
ENSMUSG00000117454	processed_pseudogene	Gm50090	ENSMUST00000234359	processed_pseudogene		18	1	3558675	1363
ENSMUSG00000026069	protein_coding	Il1rl1	ENSMUST00000097772	protein_coding	principal1	1	1	40439627	5302
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000126073	nonsense_mediated_decay		10	-1	77418227	6583
ENSMUSG00000048904	protein_coding	Neurog1	ENSMUST00000058475	protein_coding	principal1	13	-1	56252163	1686
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000146319	retained_intron		10	-1	77340176	383
ENSMUSG00000062488	protein_coding	Ifit3b	ENSMUST00000076249	protein_coding	principal1	19	1	34607970	2000
ENSMUSG00000020262	protein_coding	Adarb1	ENSMUST00000150512	retained_intron		10	-1	77417854	670
ENSMUSG00000118217	unprocessed_pseudogene	Gm6951	ENSMUST00000235333	unprocessed_pseudogene		19	1	44252517	818
ENSMUSG00000020961	protein_coding	Ston2	ENSMUST00000052969	protein_coding	principal2	12	-1	91786436	9896
ENSMUSG00000026069	protein_coding	Il1rl1	ENSMUST00000173514	protein_coding		1	1	40439776	2661
ENSMUSG00000116760	processed_transcript	Gm1604a	ENSMUST00000231840	lincRNA		17	-1	8101241	571
ENSMUSG00000026069	protein_coding	Il1rl1	ENSMUST00000053043	protein_coding	principal1	1	1	40440628	5053
ENSMUSG00000020961	protein_coding	Ston2	ENSMUST00000164713	protein_coding	alternative2	12	-1	91743855	2944
ENSMUSG00000116760	processed_transcript	Gm1604a	ENSMUST00000231559	lincRNA		17	-1	8101203	756
ENSMUSG00000020961	protein_coding	Ston2	ENSMUST00000111609	processed_transcript		12	-1	91713974	432
ENSMUSG00000116760	processed_transcript	Gm1604a	ENSMUST00000231264	retained_intron		17	-1	8046868	2926
ENSMUSG00000117678	processed_pseudogene	Gm50219	ENSMUST00000237601	processed_pseudogene		18	1	70070223	401
ENSMUSG00000030538	protein_coding	Cib1	ENSMUST00000123279	protein_coding		7	-1	80232495	627
ENSMUSG00000038037	protein_coding	Socs1	ENSMUST00000229866	protein_coding	principal1	16	-1	10785536	2908
ENSMUSG00000074896	protein_coding	Ifit3	ENSMUST00000102825	protein_coding	principal1	19	1	34583531	1745
ENSMUSG00000116760	processed_transcript	Gm1604a	ENSMUST00000232669	lincRNA		17	-1	8046860	981
ENSMUSG00000020961	protein_coding	Ston2	ENSMUST00000170077	protein_coding		12	-1	91779137	731
ENSMUSG00000034187	protein_coding	Nsf	ENSMUST00000145126	retained_intron		11	-1	103954024	3212
ENSMUSG00000116760	processed_transcript	Gm1604a	ENSMUST00000232061	lincRNA		17	-1	8101224	663
ENSMUSG00000105248	processed_pseudogene	Gm5310	ENSMUST00000197861	processed_pseudogene		6	-1	68389071	1511
ENSMUSG00000097520	antisense	4930488L21Rik	ENSMUST00000181864	antisense		8	-1	93810290	3244
ENSMUSG00000038037	protein_coding	Socs1	ENSMUST00000038099	protein_coding	principal1	16	-1	10785536	2785
ENSMUSG00000097520	antisense	4930488L21Rik	ENSMUST00000212638	antisense		8	-1	93813722	3164
ENSMUSG00000020961	protein_coding	Ston2	ENSMUST00000170984	processed_transcript		12	-1	91771170	1544
ENSMUSG00000030538	protein_coding	Cib1	ENSMUST00000206211	retained_intron		7	-1	80230360	566
ENSMUSG00000027597	protein_coding	Ahcy	ENSMUST00000054607	protein_coding	principal1	2	-1	155074497	2543
ENSMUSG00000066684	protein_coding	Pilrb1	ENSMUST00000110978	protein_coding	principal2	5	-1	137858049	1020
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000153166	nonsense_mediated_decay		7	-1	130266245	4429
ENSMUSG00000034187	protein_coding	Nsf	ENSMUST00000107009	retained_intron		11	-1	103954024	1853
ENSMUSG00000075296	protein_coding	Aldh3b2	ENSMUST00000143380	protein_coding	principal1	19	1	3972328	2142
ENSMUSG00000020961	protein_coding	Ston2	ENSMUST00000166967	protein_coding		12	-1	91746084	363
ENSMUSG00000030538	protein_coding	Cib1	ENSMUST00000205996	protein_coding		7	-1	80232597	487
ENSMUSG00000066684	protein_coding	Pilrb1	ENSMUST00000199387	protein_coding	alternative2	5	-1	137858049	1807
ENSMUSG00000027597	protein_coding	Ahcy	ENSMUST00000137242	protein_coding		2	-1	155074447	341
ENSMUSG00000030538	protein_coding	Cib1	ENSMUST00000131402	retained_intron		7	-1	80232597	471
ENSMUSG00000020961	protein_coding	Ston2	ENSMUST00000166008	processed_transcript		12	-1	91788387	943
ENSMUSG00000117506	TEC	Gm50091	ENSMUST00000234745	TEC		18	1	3616281	1962
ENSMUSG00000034187	protein_coding	Nsf	ENSMUST00000133774	protein_coding		11	-1	103938216	823
ENSMUSG00000030538	protein_coding	Cib1	ENSMUST00000206802	nonsense_mediated_decay		7	-1	80232805	657
ENSMUSG00000066684	protein_coding	Pilrb1	ENSMUST00000196195	protein_coding		5	-1	137858106	369
ENSMUSG00000117463	processed_pseudogene	Rpl7a-ps6	ENSMUST00000234895	processed_pseudogene		18	-1	3858580	812
ENSMUSG00000034187	protein_coding	Nsf	ENSMUST00000140394	retained_intron		11	-1	103926151	806
ENSMUSG00000043050	protein_coding	Tnp2	ENSMUST00000051297	protein_coding	principal1	16	-1	10788660	554
ENSMUSG00000108514	TEC	2310001K20Rik	ENSMUST00000206600	TEC		7	1	76611065	951
ENSMUSG00000034187	protein_coding	Nsf	ENSMUST00000149642	protein_coding		11	-1	103938216	278
ENSMUSG00000027597	protein_coding	Ahcy	ENSMUST00000146367	retained_intron		2	-1	155074447	536
ENSMUSG00000108771	TEC	Gm45210	ENSMUST00000206401	TEC		7	-1	76699717	1577
ENSMUSG00000098009	processed_pseudogene	Gm5597	ENSMUST00000182353	processed_pseudogene		7	-1	76245938	1193
ENSMUSG00000116713	processed_pseudogene	Gm49613	ENSMUST00000231233	processed_pseudogene		16	-1	91175334	346
ENSMUSG00000087254	lincRNA	2310005A03Rik	ENSMUST00000142569	lincRNA		2	-1	155100081	1398
ENSMUSG00000030538	protein_coding	Cib1	ENSMUST00000144295	retained_intron		7	-1	80232731	1150
ENSMUSG00000102762	lincRNA	4930403P22Rik	ENSMUST00000192234	lincRNA		1	1	36332708	713
ENSMUSG00000030538	protein_coding	Cib1	ENSMUST00000206618	retained_intron		7	-1	80232581	1016
ENSMUSG00000101396	protein_coding	Gm28510	ENSMUST00000190572	protein_coding	principal1	Y	1	10412737	928
ENSMUSG00000104955	lincRNA	1700016F12Rik	ENSMUST00000198159	lincRNA		5	1	96849505	655
ENSMUSG00000117395	processed_pseudogene	Gm7378	ENSMUST00000234528	processed_pseudogene		18	1	4010256	902
ENSMUSG00000021171	protein_coding	Esyt2	ENSMUST00000220720	nonsense_mediated_decay		12	1	116281251	3847
ENSMUSG00000117565	processed_pseudogene	Gm6248	ENSMUST00000234182	processed_pseudogene		18	-1	4052536	186
ENSMUSG00000015085	protein_coding	Entpd2	ENSMUST00000028328	protein_coding	principal1	2	1	25395874	1935
ENSMUSG00000106319	lincRNA	Gm42601	ENSMUST00000197025	lincRNA		5	1	96879342	1541
ENSMUSG00000104698	TEC	Gm42602	ENSMUST00000200288	TEC		5	1	96879518	3224
ENSMUSG00000050379	protein_coding	Septin6	ENSMUST00000115239	protein_coding	alternative1	X	-1	36989656	1845
ENSMUSG00000021171	protein_coding	Esyt2	ENSMUST00000220754	processed_transcript		12	1	116318992	684
ENSMUSG00000021171	protein_coding	Esyt2	ENSMUST00000221584	processed_transcript		12	1	116321160	502
ENSMUSG00000015085	protein_coding	Entpd2	ENSMUST00000148859	processed_transcript		2	1	25395916	1784
ENSMUSG00000039838	protein_coding	Slc45a1	ENSMUST00000037827	protein_coding	principal2	4	-1	150652174	3387
ENSMUSG00000009093	protein_coding	Gstt4	ENSMUST00000160211	protein_coding	principal1	10	-1	75822543	964
ENSMUSG00000021171	protein_coding	Esyt2	ENSMUST00000220804	nonsense_mediated_decay		12	1	116324176	1766
ENSMUSG00000050058	protein_coding	Prm3	ENSMUST00000050864	protein_coding	principal1	16	-1	10790914	410
ENSMUSG00000015085	protein_coding	Entpd2	ENSMUST00000140590	processed_transcript		2	1	25398753	495
ENSMUSG00000021171	protein_coding	Esyt2	ENSMUST00000223181	processed_transcript		12	1	116347752	4217
ENSMUSG00000039838	protein_coding	Slc45a1	ENSMUST00000117997	protein_coding	alternative2	4	-1	150652097	2955
ENSMUSG00000050379	protein_coding	Septin6	ENSMUST00000053456	protein_coding	alternative1	X	-1	36989656	4673
ENSMUSG00000021171	protein_coding	Esyt2	ENSMUST00000223150	retained_intron		12	1	116356919	4187
ENSMUSG00000039838	protein_coding	Slc45a1	ENSMUST00000147706	retained_intron		4	-1	150644089	372
ENSMUSG00000009093	protein_coding	Gstt4	ENSMUST00000159241	nonsense_mediated_decay		10	-1	75822527	940
ENSMUSG00000118622	unprocessed_pseudogene	AC163638.3	ENSMUST00000239247	unprocessed_pseudogene		14	-1	24282531	402
ENSMUSG00000105871	TEC	Gm43147	ENSMUST00000196944	TEC		5	-1	96913241	542
ENSMUSG00000028876	protein_coding	Epha10	ENSMUST00000059343	protein_coding	principal1	4	1	124880899	2544
ENSMUSG00000114648	unprocessed_pseudogene	Gm19034	ENSMUST00000224818	unprocessed_pseudogene		14	1	24285109	392
ENSMUSG00000012428	protein_coding	Steap4	ENSMUST00000115421	protein_coding	principal1	5	1	7960457	3155
ENSMUSG00000112458	lincRNA	Gm40773	ENSMUST00000218113	lincRNA		10	1	117864670	1502
ENSMUSG00000112711	lincRNA	Gm32552	ENSMUST00000217849	lincRNA		10	-1	117866715	2291
ENSMUSG00000050379	protein_coding	Septin6	ENSMUST00000060474	protein_coding	principal3	X	-1	36989656	3457
ENSMUSG00000100995	unprocessed_pseudogene	Gm29525	ENSMUST00000189844	unprocessed_pseudogene		Y	-1	10497518	699
ENSMUSG00000106357	lincRNA	Gm8013	ENSMUST00000200139	lincRNA		5	1	96921272	462
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000117872	protein_coding	alternative1	7	-1	130266245	4223
ENSMUSG00000085869	lincRNA	Gm16079	ENSMUST00000149065	lincRNA		4	-1	150678792	578
ENSMUSG00000100273	processed_pseudogene	Gm29526	ENSMUST00000187217	processed_pseudogene		Y	-1	10510860	379
ENSMUSG00000050379	protein_coding	Septin6	ENSMUST00000128766	retained_intron		X	-1	36989491	3389
ENSMUSG00000027364	protein_coding	Usp50	ENSMUST00000136319	nonsense_mediated_decay		2	-1	126783438	2129
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000130557	retained_intron		7	-1	130167884	790
ENSMUSG00000050379	protein_coding	Septin6	ENSMUST00000152291	protein_coding		X	-1	36991794	530
ENSMUSG00000105283	lincRNA	Gm33370	ENSMUST00000195935	lincRNA		5	-1	96922175	489
ENSMUSG00000112500	lincRNA	4933411E08Rik	ENSMUST00000217950	lincRNA		10	1	117925459	1689
ENSMUSG00000027364	protein_coding	Usp50	ENSMUST00000145194	processed_transcript		2	-1	126770456	809
ENSMUSG00000095950	protein_coding	Gm20737	ENSMUST00000187245	protein_coding	principal1	Y	-1	10536042	1338
ENSMUSG00000087155	antisense	Gm15008	ENSMUST00000147429	antisense		X	1	36910834	460
ENSMUSG00000095950	protein_coding	Gm20737	ENSMUST00000179665	protein_coding	principal1	Y	-1	10534428	699
ENSMUSG00000053063	protein_coding	Clec12a	ENSMUST00000151671	protein_coding		6	1	129342691	819
ENSMUSG00000038015	protein_coding	Prm2	ENSMUST00000037996	protein_coding	principal1	16	-1	10792105	621
ENSMUSG00000024511	protein_coding	Rab27b	ENSMUST00000121693	protein_coding	principal1	18	-1	70141605	6891
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000137202	protein_coding		8	1	93809966	741
ENSMUSG00000053063	protein_coding	Clec12a	ENSMUST00000147106	retained_intron		6	1	129349742	515
ENSMUSG00000046916	protein_coding	Myct1	ENSMUST00000051809	protein_coding	principal1	10	1	5593775	2845
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000122054	protein_coding	principal4	7	-1	130266191	3323
ENSMUSG00000038015	protein_coding	Prm2	ENSMUST00000189593	protein_coding	principal1	16	-1	10796134	674
ENSMUSG00000085383	antisense	Gm14218	ENSMUST00000137802	antisense		2	1	136137006	595
ENSMUSG00000028876	protein_coding	Epha10	ENSMUST00000149146	protein_coding		4	1	124885799	4660
ENSMUSG00000095687	protein_coding	Rnaset2a	ENSMUST00000231927	protein_coding	principal1	17	-1	8147785	2456
ENSMUSG00000027364	protein_coding	Usp50	ENSMUST00000028842	protein_coding	principal1	2	-1	126783444	1361
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000125695	retained_intron		8	1	93810636	938
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000136264	retained_intron		7	-1	130171914	957
ENSMUSG00000045989	protein_coding	4930451I11Rik	ENSMUST00000061695	protein_coding	principal1	7	-1	126831496	481
ENSMUSG00000028484	protein_coding	Psip1	ENSMUST00000030207	protein_coding	principal1	4	-1	83486459	3251
ENSMUSG00000105377	TEC	Gm43148	ENSMUST00000198237	TEC		5	1	96936813	520
ENSMUSG00000023008	protein_coding	Fmnl3	ENSMUST00000081224	protein_coding		15	-1	99370449	4137
ENSMUSG00000028876	protein_coding	Epha10	ENSMUST00000151791	processed_transcript		4	1	124899402	705
ENSMUSG00000105257	TEC	Gm43144	ENSMUST00000198256	TEC		5	1	96940297	485
ENSMUSG00000053063	protein_coding	Clec12a	ENSMUST00000065289	protein_coding	principal1	6	1	129349964	2502
ENSMUSG00000027364	protein_coding	Usp50	ENSMUST00000130356	protein_coding		2	-1	126783470	1203
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000125975	protein_coding	alternative2	8	1	123062988	2408
ENSMUSG00000007564	protein_coding	Ppp2r1a	ENSMUST00000007708	protein_coding	principal1	17	1	20945311	2410
ENSMUSG00000028484	protein_coding	Psip1	ENSMUST00000152382	retained_intron		4	-1	83460292	561
ENSMUSG00000040405	protein_coding	Havcr1	ENSMUST00000109224	protein_coding		11	1	46735080	565
ENSMUSG00000045989	protein_coding	4930451I11Rik	ENSMUST00000205907	processed_transcript		7	-1	126831639	421
ENSMUSG00000028484	protein_coding	Psip1	ENSMUST00000126706	protein_coding		4	-1	83464964	463
ENSMUSG00000085263	antisense	1700125G02Rik	ENSMUST00000154947	antisense		4	-1	124894782	519
ENSMUSG00000053063	protein_coding	Clec12a	ENSMUST00000133756	retained_intron		6	1	129356802	3233
ENSMUSG00000045989	protein_coding	4930451I11Rik	ENSMUST00000205320	protein_coding		7	-1	126831472	360
ENSMUSG00000024511	protein_coding	Rab27b	ENSMUST00000117692	protein_coding	principal1	18	-1	70053588	2842
ENSMUSG00000029128	protein_coding	Rab28	ENSMUST00000201422	protein_coding	alternative1	5	-1	41708121	1697
ENSMUSG00000071671	processed_pseudogene	Gm10343	ENSMUST00000096279	processed_pseudogene		16	1	10801381	333
ENSMUSG00000024511	protein_coding	Rab27b	ENSMUST00000069749	protein_coding	principal1	18	-1	70053588	2671
ENSMUSG00000095687	protein_coding	Rnaset2a	ENSMUST00000097420	protein_coding	principal1	17	-1	8148097	1793
ENSMUSG00000021490	protein_coding	Slc34a1	ENSMUST00000225259	protein_coding	principal1	13	1	55398187	3983
ENSMUSG00000028484	protein_coding	Psip1	ENSMUST00000107214	protein_coding		4	-1	83486453	1973
ENSMUSG00000007564	protein_coding	Ppp2r1a	ENSMUST00000173658	nonsense_mediated_decay		17	1	20945487	761
ENSMUSG00000116038	antisense	Gm46563	ENSMUST00000230936	antisense		16	1	10797943	495
ENSMUSG00000023008	protein_coding	Fmnl3	ENSMUST00000120633	protein_coding	alternative1	15	-1	99370449	4290
ENSMUSG00000007564	protein_coding	Ppp2r1a	ENSMUST00000173359	retained_intron		17	1	20956577	550
ENSMUSG00000027364	protein_coding	Usp50	ENSMUST00000151140	retained_intron		2	-1	126783458	980
ENSMUSG00000007564	protein_coding	Ppp2r1a	ENSMUST00000147983	protein_coding		17	1	20956778	430
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000121064	protein_coding		7	-1	130261857	1830
ENSMUSG00000024511	protein_coding	Rab27b	ENSMUST00000127217	retained_intron		18	-1	70141574	3281
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000117754	protein_coding		7	-1	130261857	1827
ENSMUSG00000082867	processed_pseudogene	Gm15730	ENSMUST00000121828	processed_pseudogene		5	1	8055139	415
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000120715	protein_coding		7	-1	130261857	2130
ENSMUSG00000028484	protein_coding	Psip1	ENSMUST00000107215	protein_coding		4	-1	83486458	1898
ENSMUSG00000029128	protein_coding	Rab28	ENSMUST00000031011	protein_coding	principal3	5	-1	41708154	1635
ENSMUSG00000007564	protein_coding	Ppp2r1a	ENSMUST00000136975	retained_intron		17	1	20958741	811
ENSMUSG00000021490	protein_coding	Slc34a1	ENSMUST00000057167	protein_coding	principal1	13	1	55399693	2433
ENSMUSG00000117958	transcribed_processed_pseudogene	Gm35183	ENSMUST00000237187	processed_transcript		19	1	44272271	691
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000119260	protein_coding		7	-1	130261857	2460
ENSMUSG00000117958	transcribed_processed_pseudogene	Gm35183	ENSMUST00000235961	transcribed_processed_pseudogene		19	1	44273672	356
ENSMUSG00000099803	antisense	Gm28863	ENSMUST00000186888	antisense		7	-1	110639358	431
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000117089	protein_coding		7	-1	130261857	2463
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000117691	protein_coding		7	-1	130261857	2469
ENSMUSG00000007564	protein_coding	Ppp2r1a	ENSMUST00000139293	retained_intron		17	1	20958989	750
ENSMUSG00000021490	protein_coding	Slc34a1	ENSMUST00000224925	protein_coding		13	1	55400542	928
ENSMUSG00000029128	protein_coding	Rab28	ENSMUST00000202913	protein_coding		5	-1	41708157	863
ENSMUSG00000007564	protein_coding	Ppp2r1a	ENSMUST00000138971	retained_intron		17	1	20960490	464
ENSMUSG00000028013	protein_coding	Ppa2	ENSMUST00000029644	protein_coding	principal3	3	1	133310110	1226
ENSMUSG00000029128	protein_coding	Rab28	ENSMUST00000200702	retained_intron		5	-1	41627502	646
ENSMUSG00000007564	protein_coding	Ppp2r1a	ENSMUST00000231928	processed_transcript		17	1	20965294	524
ENSMUSG00000022501	protein_coding	Prm1	ENSMUST00000023144	protein_coding	principal1	16	-1	10796886	469
ENSMUSG00000028484	protein_coding	Psip1	ENSMUST00000144349	retained_intron		4	-1	83465043	1003
ENSMUSG00000029128	protein_coding	Rab28	ENSMUST00000201473	retained_intron		5	-1	41629117	2891
ENSMUSG00000086528	antisense	Gm15731	ENSMUST00000146887	antisense		5	-1	8052707	2195
ENSMUSG00000023008	protein_coding	Fmnl3	ENSMUST00000088233	protein_coding	principal3	15	-1	99370482	4423
ENSMUSG00000027363	protein_coding	Usp8	ENSMUST00000138859	processed_transcript		2	1	126707328	3463
ENSMUSG00000028484	protein_coding	Psip1	ENSMUST00000130626	protein_coding		4	-1	83486178	662
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000117858	protein_coding		7	-1	130261857	2563
ENSMUSG00000028013	protein_coding	Ppa2	ENSMUST00000122334	protein_coding	alternative2	3	1	133310122	1368
ENSMUSG00000022501	protein_coding	Prm1	ENSMUST00000230568	protein_coding	principal1	16	-1	10805839	460
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000120141	protein_coding		7	-1	130261857	2196
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000117357	protein_coding		7	-1	130261857	2118
ENSMUSG00000021490	protein_coding	Slc34a1	ENSMUST00000224043	retained_intron		13	1	55403204	2168
ENSMUSG00000023008	protein_coding	Fmnl3	ENSMUST00000139767	retained_intron		15	-1	99325653	618
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000122448	protein_coding		7	-1	130261857	2212
ENSMUSG00000021490	protein_coding	Slc34a1	ENSMUST00000225538	retained_intron		13	1	55408319	722
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000149248	protein_coding	principal2	8	1	123065179	2896
ENSMUSG00000030790	protein_coding	Adm	ENSMUST00000033054	protein_coding	principal1	7	1	110627661	1390
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000118296	protein_coding		7	-1	130261857	2296
ENSMUSG00000021490	protein_coding	Slc34a1	ENSMUST00000223954	retained_intron		13	1	55408754	860
ENSMUSG00000105006	lincRNA	Gm9484	ENSMUST00000195892	lincRNA		5	-1	96997364	1159
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000121080	protein_coding		7	-1	130261857	2218
ENSMUSG00000066009	protein_coding	Zfp987	ENSMUST00000154939	processed_transcript		4	1	146097298	266
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000117073	protein_coding		7	-1	130261857	2209
ENSMUSG00000107305	lincRNA	Gm43262	ENSMUST00000202970	lincRNA		13	-1	53414830	1219
ENSMUSG00000023008	protein_coding	Fmnl3	ENSMUST00000140368	processed_transcript		15	-1	99335727	760
ENSMUSG00000044444	protein_coding	Pfn3	ENSMUST00000054146	protein_coding	principal1	13	-1	55415232	545
ENSMUSG00000030790	protein_coding	Adm	ENSMUST00000185766	retained_intron		7	1	110628028	376
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000108868	protein_coding		8	1	123065283	845
ENSMUSG00000066009	protein_coding	Zfp987	ENSMUST00000105730	protein_coding		4	1	146097312	410
ENSMUSG00000026981	protein_coding	Il1rn	ENSMUST00000114487	protein_coding	principal3	2	1	24336853	2474
ENSMUSG00000115877	processed_pseudogene	Gm49478	ENSMUST00000229316	processed_pseudogene		15	-1	99349535	434
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000129542	retained_intron		7	-1	130178064	719
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000153285	protein_coding	alternative2	8	1	123065476	2481
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000147859	retained_intron		7	-1	130182778	335
ENSMUSG00000110249	TEC	9330121K16Rik	ENSMUST00000211464	TEC		8	1	55073249	3886
ENSMUSG00000109700	lincRNA	Gm21123	ENSMUST00000210822	lincRNA		7	-1	110699734	1734
ENSMUSG00000026981	protein_coding	Il1rn	ENSMUST00000114486	retained_intron		2	1	24336856	2554
ENSMUSG00000109736	processed_pseudogene	Gm8734	ENSMUST00000211669	processed_pseudogene		8	-1	55081715	1312
ENSMUSG00000110308	TEC	Gm45516	ENSMUST00000211588	TEC		8	1	63020866	4182
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000133806	retained_intron		7	-1	130196845	953
ENSMUSG00000109749	processed_pseudogene	Gm18907	ENSMUST00000209719	processed_pseudogene		7	-1	110713397	932
ENSMUSG00000109744	TEC	Gm45461	ENSMUST00000211726	TEC		8	1	62979221	4535
ENSMUSG00000056418	lincRNA	BC043934	ENSMUST00000185694	lincRNA		9	-1	96438138	2356
ENSMUSG00000026981	protein_coding	Il1rn	ENSMUST00000142093	protein_coding		2	1	24336856	321
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000148675	retained_intron		7	-1	130196357	656
ENSMUSG00000110025	processed_pseudogene	Gm20586	ENSMUST00000210122	processed_pseudogene		8	1	55532291	547
ENSMUSG00000056418	lincRNA	BC043934	ENSMUST00000070500	lincRNA		9	-1	96437434	1651
ENSMUSG00000118397	unitary_pseudogene	Gm50488	ENSMUST00000238558	unitary_pseudogene		9	-1	96449345	612
ENSMUSG00000028013	protein_coding	Ppa2	ENSMUST00000153387	processed_transcript		3	1	133310482	937
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000127091	nonsense_mediated_decay		7	-1	130228756	665
ENSMUSG00000028013	protein_coding	Ppa2	ENSMUST00000198519	retained_intron		3	1	133321468	5100
ENSMUSG00000066009	protein_coding	Zfp987	ENSMUST00000091878	protein_coding	principal1	4	1	146097345	2798
ENSMUSG00000085124	lincRNA	Gm12766	ENSMUST00000140298	lincRNA		7	1	34438137	1823
ENSMUSG00000027015	protein_coding	Cybrd1	ENSMUST00000028403	protein_coding	principal1	2	1	71117923	5339
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000170883	protein_coding	principal1	1	-1	93478801	6231
ENSMUSG00000081863	processed_pseudogene	Gm12780	ENSMUST00000122458	processed_pseudogene		7	-1	34496065	645
ENSMUSG00000028013	protein_coding	Ppa2	ENSMUST00000150386	processed_transcript		3	1	133338936	437
ENSMUSG00000107008	lincRNA	Gm2762	ENSMUST00000202976	lincRNA		13	1	53393657	568
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000129103	retained_intron		7	-1	130263975	1265
ENSMUSG00000026981	protein_coding	Il1rn	ENSMUST00000114485	protein_coding		2	1	24345288	728
ENSMUSG00000030849	protein_coding	Fgfr2	ENSMUST00000208844	retained_intron		7	-1	130266255	3981
ENSMUSG00000028013	protein_coding	Ppa2	ENSMUST00000125858	retained_intron		3	1	133339109	1514
ENSMUSG00000099432	unprocessed_pseudogene	Gm18849	ENSMUST00000189861	unprocessed_pseudogene		1	1	46056310	560
ENSMUSG00000023993	protein_coding	Treml1	ENSMUST00000224001	protein_coding	principal2	17	1	48359916	1220
ENSMUSG00000028013	protein_coding	Ppa2	ENSMUST00000106315	protein_coding		3	1	133348076	713
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000042498	protein_coding	principal1	1	-1	93445686	4427
ENSMUSG00000028013	protein_coding	Ppa2	ENSMUST00000196807	retained_intron		3	1	133372414	2034
ENSMUSG00000087657	antisense	Gm16764	ENSMUST00000138891	antisense		7	1	132597387	541
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000186164	protein_coding		1	-1	93440792	3808
ENSMUSG00000037808	protein_coding	Fam76b	ENSMUST00000059579	protein_coding	principal1	9	1	13827716	3702
ENSMUSG00000107008	lincRNA	Gm2762	ENSMUST00000201658	lincRNA		13	1	53393673	1234
ENSMUSG00000087657	antisense	Gm16764	ENSMUST00000164986	antisense		7	1	132597387	389
ENSMUSG00000023993	protein_coding	Treml1	ENSMUST00000024792	protein_coding	alternative2	17	1	48359916	1235
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000128803	retained_intron		8	1	123065508	3385
ENSMUSG00000087657	antisense	Gm16764	ENSMUST00000148931	antisense		7	1	132597403	433
ENSMUSG00000051234	protein_coding	Rnf7	ENSMUST00000057500	protein_coding	principal1	9	-1	96478675	1232
ENSMUSG00000107008	lincRNA	Gm2762	ENSMUST00000201517	lincRNA		13	1	53393689	2339
ENSMUSG00000107008	lincRNA	Gm2762	ENSMUST00000202502	lincRNA		13	1	53394097	335
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000153492	nonsense_mediated_decay		8	1	123073794	883
ENSMUSG00000023993	protein_coding	Treml1	ENSMUST00000225849	protein_coding	alternative2	17	1	48359919	974
ENSMUSG00000107008	lincRNA	Gm2762	ENSMUST00000201815	lincRNA		13	1	53394291	537
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000142150	retained_intron		8	1	123080409	693
ENSMUSG00000107008	lincRNA	Gm2762	ENSMUST00000200797	lincRNA		13	1	53394291	523
ENSMUSG00000051234	protein_coding	Rnf7	ENSMUST00000071301	protein_coding		9	-1	96478610	334
ENSMUSG00000026149	protein_coding	Tm4sf20	ENSMUST00000027331	protein_coding	principal1	1	-1	82768461	1508
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000189951	retained_intron		1	-1	93445652	2172
ENSMUSG00000107008	lincRNA	Gm2762	ENSMUST00000202366	lincRNA		13	1	53395328	356
ENSMUSG00000107008	lincRNA	Gm2762	ENSMUST00000202739	lincRNA		13	1	53400270	2665
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000190321	protein_coding		1	-1	93445682	528
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000034198	protein_coding	principal3	8	1	93810838	2948
ENSMUSG00000037808	protein_coding	Fam76b	ENSMUST00000156680	nonsense_mediated_decay		9	1	13827716	3760
ENSMUSG00000051234	protein_coding	Rnf7	ENSMUST00000128955	processed_transcript		9	-1	96478588	325
ENSMUSG00000026149	protein_coding	Tm4sf20	ENSMUST00000138787	processed_transcript		1	-1	82768461	603
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000188988	protein_coding		1	-1	93440961	740
ENSMUSG00000023993	protein_coding	Treml1	ENSMUST00000223968	retained_intron		17	1	48359919	1229
ENSMUSG00000033177	protein_coding	Tmprss7	ENSMUST00000114562	protein_coding	principal1	16	-1	45693658	2587
ENSMUSG00000037808	protein_coding	Fam76b	ENSMUST00000129861	retained_intron		9	1	13827735	723
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000128234	protein_coding		8	1	123080781	1080
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000186787	protein_coding		1	-1	93445432	671
ENSMUSG00000023993	protein_coding	Treml1	ENSMUST00000223956	nonsense_mediated_decay		17	1	48359919	848
ENSMUSG00000037808	protein_coding	Fam76b	ENSMUST00000130106	retained_intron		9	1	13836703	697
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000130787	retained_intron		8	1	123087238	613
ENSMUSG00000099564	protein_coding	Gm28729	ENSMUST00000190704	protein_coding	principal1	9	-1	96525264	1964
ENSMUSG00000026981	protein_coding	Il1rn	ENSMUST00000114482	protein_coding	alternative1	2	1	24345310	1986
ENSMUSG00000037808	protein_coding	Fam76b	ENSMUST00000213416	protein_coding		9	1	13836877	540
ENSMUSG00000101615	processed_pseudogene	Gm8495	ENSMUST00000188740	processed_pseudogene		9	1	96537161	694
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000152972	processed_transcript		8	1	123087408	390
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000125716	protein_coding	principal3	8	1	93810840	3462
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000135991	protein_coding		8	1	123091676	592
ENSMUSG00000025172	protein_coding	Ankrd2	ENSMUST00000238137	protein_coding	alternative2	19	1	42036000	1138
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000189025	protein_coding		1	-1	93478815	850
ENSMUSG00000116882	TEC	Gm49614	ENSMUST00000231709	TEC		16	-1	91222926	827
ENSMUSG00000000738	protein_coding	Spg7	ENSMUST00000212364	processed_transcript		8	1	123094521	669
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000185349	retained_intron		1	-1	93445649	630
ENSMUSG00000025172	protein_coding	Ankrd2	ENSMUST00000026172	protein_coding	principal2	19	1	42036038	1100
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000188165	protein_coding		1	-1	93478377	341
ENSMUSG00000026981	protein_coding	Il1rn	ENSMUST00000143423	processed_transcript		2	1	24345348	636
ENSMUSG00000110064	processed_pseudogene	Gm18320	ENSMUST00000211304	processed_pseudogene		8	1	55659353	595
ENSMUSG00000110682	lincRNA	A530010L16Rik	ENSMUST00000212007	lincRNA		8	-1	122763021	2336
ENSMUSG00000034088	protein_coding	Hdlbp	ENSMUST00000188844	retained_intron		1	-1	93478380	3208
ENSMUSG00000109943	processed_pseudogene	Gm45610	ENSMUST00000209227	processed_pseudogene		8	1	55777199	784
ENSMUSG00000090489	processed_pseudogene	Gm17415	ENSMUST00000096427	processed_pseudogene		1	1	93421700	789
ENSMUSG00000110682	lincRNA	A530010L16Rik	ENSMUST00000212247	lincRNA		8	-1	122762761	746
ENSMUSG00000110612	processed_pseudogene	Gm17827	ENSMUST00000211825	processed_pseudogene		8	1	124005305	742
ENSMUSG00000025754	protein_coding	Agbl1	ENSMUST00000156166	protein_coding	principal2	7	1	76229887	3369
ENSMUSG00000086631	lincRNA	Gm12784	ENSMUST00000127462	lincRNA		7	1	34544472	579
ENSMUSG00000021258	protein_coding	Ccnk	ENSMUST00000221167	protein_coding	principal1	12	1	108179579	2789
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000138659	protein_coding	alternative1	8	1	93811313	5526
ENSMUSG00000086631	lincRNA	Gm12784	ENSMUST00000206001	lincRNA		7	1	34547206	3739
ENSMUSG00000039830	protein_coding	Olig2	ENSMUST00000035608	protein_coding	principal1	16	1	91225457	2530
ENSMUSG00000024175	protein_coding	Tekt4	ENSMUST00000234104	processed_transcript		17	1	25454615	1084
ENSMUSG00000021258	protein_coding	Ccnk	ENSMUST00000223363	retained_intron		12	1	108199085	370
ENSMUSG00000040205	protein_coding	Cuzd1	ENSMUST00000046611	protein_coding	principal1	7	-1	131322292	2256
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000127900	nonsense_mediated_decay		8	1	93896231	805
ENSMUSG00000055041	protein_coding	Commd5	ENSMUST00000068407	protein_coding	principal1	15	1	76899910	1037
ENSMUSG00000118585	unprocessed_pseudogene	AC110885.1	ENSMUST00000239260	unprocessed_pseudogene		7	1	131204932	132
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000130974	retained_intron		8	1	93949505	402
ENSMUSG00000020268	protein_coding	Lyrm7	ENSMUST00000148070	nonsense_mediated_decay		11	-1	54860916	1501
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000142466	protein_coding		8	1	93950405	332
ENSMUSG00000017009	protein_coding	Sdc4	ENSMUST00000017153	protein_coding	principal1	2	-1	164443186	2458
ENSMUSG00000021258	protein_coding	Ccnk	ENSMUST00000101055	protein_coding	principal1	12	1	108179738	2627
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000149530	protein_coding		8	1	93950405	231
ENSMUSG00000017009	protein_coding	Sdc4	ENSMUST00000142909	processed_transcript		2	-1	164443887	797
ENSMUSG00000025754	protein_coding	Agbl1	ENSMUST00000026854	protein_coding	alternative2	7	1	76411062	3452
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000144451	processed_transcript		8	1	93952947	748
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000148367	retained_intron		7	-1	110801599	793
ENSMUSG00000046258	protein_coding	Adam29	ENSMUST00000053441	protein_coding	principal1	8	-1	55906948	2726
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000155245	retained_intron		8	1	93962844	848
ENSMUSG00000055041	protein_coding	Commd5	ENSMUST00000109793	protein_coding	principal1	15	1	76899936	920
ENSMUSG00000031748	protein_coding	Gnao1	ENSMUST00000212008	retained_intron		8	1	93965796	3415
ENSMUSG00000025754	protein_coding	Agbl1	ENSMUST00000107442	protein_coding	alternative2	7	1	76411062	2617
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000176210	nonsense_mediated_decay		7	-1	110821337	647
ENSMUSG00000033177	protein_coding	Tmprss7	ENSMUST00000170951	processed_transcript		16	-1	45685376	2334
ENSMUSG00000055041	protein_coding	Commd5	ENSMUST00000230815	retained_intron		15	1	76899965	1331
ENSMUSG00000030368	protein_coding	Ceacam11	ENSMUST00000094799	protein_coding	principal1	7	1	17972124	1054
ENSMUSG00000033177	protein_coding	Tmprss7	ENSMUST00000169421	processed_transcript		16	-1	45689615	2307
ENSMUSG00000033177	protein_coding	Tmprss7	ENSMUST00000178150	processed_transcript		16	-1	45686495	313
ENSMUSG00000060205	protein_coding	Olfr57	ENSMUST00000203906	protein_coding	principal1	10	1	79028741	1647
ENSMUSG00000019979	protein_coding	Apaf1	ENSMUST00000159110	protein_coding	principal1	10	-1	91082662	6433
ENSMUSG00000113498	unprocessed_pseudogene	Gm4036	ENSMUST00000220842	unprocessed_pseudogene		12	-1	21630450	626
ENSMUSG00000056004	protein_coding	9330182L06Rik	ENSMUST00000155764	nonsense_mediated_decay		5	1	9266118	3716
ENSMUSG00000117247	TEC	Gm49923	ENSMUST00000233448	TEC		17	-1	72522643	2362
ENSMUSG00000033177	protein_coding	Tmprss7	ENSMUST00000178323	retained_intron		16	-1	45686500	338
ENSMUSG00000019979	protein_coding	Apaf1	ENSMUST00000160725	processed_transcript		10	-1	90991590	511
ENSMUSG00000117046	processed_pseudogene	Gm19183	ENSMUST00000233853	processed_pseudogene		17	1	72256258	889
ENSMUSG00000020268	protein_coding	Lyrm7	ENSMUST00000144164	protein_coding	principal1	11	-1	54860912	3431
ENSMUSG00000093846	lincRNA	Gm4425	ENSMUST00000172838	lincRNA		12	-1	22156646	2857
ENSMUSG00000060205	protein_coding	Olfr57	ENSMUST00000082244	protein_coding	principal1	10	1	79034723	1080
ENSMUSG00000113638	unprocessed_pseudogene	Gm9289	ENSMUST00000221269	unprocessed_pseudogene		12	-1	22208643	606
ENSMUSG00000105129	processed_pseudogene	Gm19566	ENSMUST00000199576	processed_pseudogene		5	-1	105981182	610
ENSMUSG00000092597	unprocessed_pseudogene	Gm20486	ENSMUST00000101544	unprocessed_pseudogene		12	-1	22274512	128
ENSMUSG00000105707	TEC	Gm43753	ENSMUST00000196539	TEC		5	-1	62660107	3309
ENSMUSG00000020268	protein_coding	Lyrm7	ENSMUST00000141703	nonsense_mediated_decay		11	-1	54860588	2389
ENSMUSG00000039913	protein_coding	Pak7	ENSMUST00000035264	protein_coding	principal1	2	-1	136387938	4848
ENSMUSG00000106483	lincRNA	Gm32736	ENSMUST00000200427	lincRNA		5	1	106095091	2701
ENSMUSG00000037999	protein_coding	Arap2	ENSMUST00000160620	retained_intron		5	-1	62612374	2883
ENSMUSG00000084883	protein_coding	Ccdc85c	ENSMUST00000222310	protein_coding	principal2	12	-1	108275425	4298
ENSMUSG00000105600	processed_pseudogene	Gm5987	ENSMUST00000196433	processed_pseudogene		5	1	106215651	1151
ENSMUSG00000020268	protein_coding	Lyrm7	ENSMUST00000127887	retained_intron		11	-1	54850486	335
ENSMUSG00000084883	protein_coding	Ccdc85c	ENSMUST00000136175	protein_coding	alternative2	12	-1	108275133	1302
ENSMUSG00000106669	processed_pseudogene	Gm38433	ENSMUST00000196978	processed_pseudogene		5	1	106272210	856
ENSMUSG00000078492	antisense	1700045H11Rik	ENSMUST00000128056	antisense		4	-1	150854949	593
ENSMUSG00000020268	protein_coding	Lyrm7	ENSMUST00000124351	processed_transcript		11	-1	54860609	279
ENSMUSG00000084314	processed_pseudogene	Rps15a-ps3	ENSMUST00000121072	processed_pseudogene		4	1	150847113	395
ENSMUSG00000105508	lincRNA	Gm32921	ENSMUST00000200592	lincRNA		5	1	106321340	810
ENSMUSG00000020268	protein_coding	Lyrm7	ENSMUST00000135853	retained_intron		11	-1	54860585	349
ENSMUSG00000086873	processed_transcript	Gm15672	ENSMUST00000151512	processed_transcript		5	-1	139150693	1354
ENSMUSG00000039913	protein_coding	Pak7	ENSMUST00000077200	protein_coding	principal1	2	-1	136387960	3957
ENSMUSG00000105531	lincRNA	4930458A03Rik	ENSMUST00000198197	lincRNA		5	1	106351535	961
ENSMUSG00000024175	protein_coding	Tekt4	ENSMUST00000234449	protein_coding		17	1	25471590	1529
ENSMUSG00000104604	processed_pseudogene	Gm42915	ENSMUST00000197478	processed_pseudogene		5	-1	106355684	323
ENSMUSG00000039913	protein_coding	Pak7	ENSMUST00000143329	retained_intron		2	-1	136387967	2097
ENSMUSG00000076522	IG_V_gene	Igkv16-104	ENSMUST00000103323	IG_V_gene	principal1	6	1	68425575	378
ENSMUSG00000033669	protein_coding	Zfp7	ENSMUST00000023179	protein_coding	principal1	15	1	76879259	2772
ENSMUSG00000030760	protein_coding	Acer3	ENSMUST00000033020	protein_coding	principal1	7	-1	98309538	11340
ENSMUSG00000019979	protein_coding	Apaf1	ENSMUST00000020157	protein_coding	principal1	10	-1	91082770	6577
ENSMUSG00000055471	protein_coding	Alk	ENSMUST00000086639	protein_coding	principal1	17	-1	72603827	5454
ENSMUSG00000033669	protein_coding	Zfp7	ENSMUST00000230106	protein_coding	principal1	15	1	76879309	2960
ENSMUSG00000076523	IG_V_gene	Igkv15-103	ENSMUST00000103324	IG_V_gene	principal1	6	1	68437440	375
ENSMUSG00000033669	protein_coding	Zfp7	ENSMUST00000229831	protein_coding		15	1	76879310	395
ENSMUSG00000030760	protein_coding	Acer3	ENSMUST00000120520	protein_coding		7	-1	98321208	3964
ENSMUSG00000019979	protein_coding	Apaf1	ENSMUST00000162618	protein_coding		10	-1	91082704	5151
ENSMUSG00000033669	protein_coding	Zfp7	ENSMUST00000229729	retained_intron		15	1	76879322	2340
ENSMUSG00000024175	protein_coding	Tekt4	ENSMUST00000025002	protein_coding	principal1	17	1	25471590	1536
ENSMUSG00000054162	protein_coding	Spock3	ENSMUST00000117377	protein_coding	alternative2	8	1	62951009	3066
ENSMUSG00000118260	processed_pseudogene	Cnn2-ps	ENSMUST00000236558	processed_pseudogene		19	1	34623682	926
ENSMUSG00000056004	protein_coding	9330182L06Rik	ENSMUST00000152095	nonsense_mediated_decay		5	1	9266127	3642
ENSMUSG00000055471	protein_coding	Alk	ENSMUST00000232891	retained_intron		17	-1	72604307	2575
ENSMUSG00000033669	protein_coding	Zfp7	ENSMUST00000230954	retained_intron		15	1	76879331	4356
ENSMUSG00000024175	protein_coding	Tekt4	ENSMUST00000235033	protein_coding		17	1	25471597	1518
ENSMUSG00000054162	protein_coding	Spock3	ENSMUST00000118003	protein_coding	principal3	8	1	62951232	2860
ENSMUSG00000033669	protein_coding	Zfp7	ENSMUST00000229990	protein_coding		15	1	76879335	644
ENSMUSG00000079014	protein_coding	Serpina3i	ENSMUST00000109958	protein_coding	principal1	12	1	104263122	2200
ENSMUSG00000040717	protein_coding	Il17rd	ENSMUST00000035336	protein_coding	principal1	14	1	27038941	8280
ENSMUSG00000024175	protein_coding	Tekt4	ENSMUST00000234436	processed_transcript		17	1	25474304	881
ENSMUSG00000055471	protein_coding	Alk	ENSMUST00000232804	retained_intron		17	-1	72604627	2902
ENSMUSG00000089826	unprocessed_pseudogene	Gm16560	ENSMUST00000159115	unprocessed_pseudogene		3	-1	94173483	404
ENSMUSG00000030760	protein_coding	Acer3	ENSMUST00000151258	nonsense_mediated_decay		7	-1	98309528	1440
ENSMUSG00000117126	TEC	Gm49924	ENSMUST00000233690	TEC		17	-1	71927030	1799
ENSMUSG00000019979	protein_coding	Apaf1	ENSMUST00000159457	processed_transcript		10	-1	91000411	597
ENSMUSG00000056004	protein_coding	9330182L06Rik	ENSMUST00000131626	retained_intron		5	1	9266130	1554
ENSMUSG00000030760	protein_coding	Acer3	ENSMUST00000206182	retained_intron		7	-1	98226888	3943
ENSMUSG00000040717	protein_coding	Il17rd	ENSMUST00000223942	protein_coding		14	1	27039079	2186
ENSMUSG00000079014	protein_coding	Serpina3i	ENSMUST00000109960	retained_intron		12	1	104263157	701
ENSMUSG00000116024	protein_coding	Gm49527	ENSMUST00000229782	processed_transcript		15	1	76879320	659
ENSMUSG00000019979	protein_coding	Apaf1	ENSMUST00000161095	retained_intron		10	-1	90999719	666
ENSMUSG00000074424	protein_coding	Spopfm2	ENSMUST00000161475	protein_coding	principal1	3	-1	94178193	2247
ENSMUSG00000054162	protein_coding	Spock3	ENSMUST00000138398	retained_intron		8	1	62951361	2800
ENSMUSG00000108611	processed_pseudogene	Gm44879	ENSMUST00000207007	processed_pseudogene		7	-1	77298996	503
ENSMUSG00000019979	protein_coding	Apaf1	ENSMUST00000161987	protein_coding		10	-1	91082429	2710
ENSMUSG00000074424	protein_coding	Spopfm2	ENSMUST00000167916	protein_coding	principal1	3	-1	94176616	2205
ENSMUSG00000067297	protein_coding	Ifit1bl2	ENSMUST00000087357	protein_coding	principal1	19	-1	34640743	3367
ENSMUSG00000030760	protein_coding	Acer3	ENSMUST00000137899	nonsense_mediated_decay		7	-1	98309506	441
ENSMUSG00000054162	protein_coding	Spock3	ENSMUST00000119068	protein_coding	principal3	8	1	62951361	3201
ENSMUSG00000057195	protein_coding	Ceacam13	ENSMUST00000081703	protein_coding	principal3	7	1	18009889	946
ENSMUSG00000098193	processed_pseudogene	Gm26963	ENSMUST00000183172	processed_pseudogene		17	-1	72700445	941
ENSMUSG00000019979	protein_coding	Apaf1	ENSMUST00000160788	protein_coding		10	-1	91082770	1596
ENSMUSG00000116024	protein_coding	Gm49527	ENSMUST00000230214	protein_coding	principal1	15	1	76879434	1384
ENSMUSG00000106594	lincRNA	4930432H08Rik	ENSMUST00000198220	lincRNA		5	-1	106366849	1284
ENSMUSG00000028967	protein_coding	Errfi1	ENSMUST00000073600	protein_coding	principal1	4	1	150853919	3036
ENSMUSG00000100562	lincRNA	Gm29611	ENSMUST00000186132	lincRNA		1	1	78615467	1011
ENSMUSG00000054162	protein_coding	Spock3	ENSMUST00000141513	processed_transcript		8	1	62951925	343
ENSMUSG00000108324	TEC	Gm44608	ENSMUST00000206827	TEC		7	1	77412573	855
ENSMUSG00000090268	protein_coding	Spopfm3	ENSMUST00000159524	protein_coding	principal1	3	1	94196714	1593
ENSMUSG00000115042	processed_pseudogene	Gm29742	ENSMUST00000228657	processed_pseudogene		15	1	10917437	385
ENSMUSG00000115285	processed_pseudogene	Gm49068	ENSMUST00000227981	processed_pseudogene		15	1	10938122	423
ENSMUSG00000090111	unprocessed_pseudogene	Gm16584	ENSMUST00000159267	unprocessed_pseudogene		3	-1	94201398	189
ENSMUSG00000105618	lincRNA	Gm42916	ENSMUST00000197142	lincRNA		5	1	106369012	1042
ENSMUSG00000040717	protein_coding	Il17rd	ENSMUST00000225146	protein_coding		14	1	27039256	3366
ENSMUSG00000054162	protein_coding	Spock3	ENSMUST00000093480	protein_coding	principal3	8	1	62951800	3024
ENSMUSG00000089689	unprocessed_pseudogene	Gm4982	ENSMUST00000160440	unprocessed_pseudogene		3	-1	94237799	1098
ENSMUSG00000109622	TEC	Gm45517	ENSMUST00000209973	TEC		8	1	63198972	2468
ENSMUSG00000089893	unprocessed_pseudogene	Gm9141	ENSMUST00000159355	unprocessed_pseudogene		3	-1	94243470	1007
ENSMUSG00000040717	protein_coding	Il17rd	ENSMUST00000226105	protein_coding		14	1	27067397	2923
ENSMUSG00000057195	protein_coding	Ceacam13	ENSMUST00000108488	protein_coding	alternative2	7	1	18009889	1005
ENSMUSG00000029001	protein_coding	Fbxo44	ENSMUST00000057907	protein_coding	principal1	4	-1	148160083	1829
ENSMUSG00000049691	protein_coding	Nkx3-2	ENSMUST00000060820	protein_coding	principal1	5	-1	41764501	1718
ENSMUSG00000028730	protein_coding	Cfap57	ENSMUST00000071972	protein_coding	principal1	4	-1	118620777	4020
ENSMUSG00000094627	processed_pseudogene	Gm10182	ENSMUST00000178676	processed_pseudogene		9	-1	22321377	273
ENSMUSG00000040717	protein_coding	Il17rd	ENSMUST00000225829	processed_transcript		14	1	27087765	2134
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000237400	protein_coding	principal2	18	-1	64516652	2745
ENSMUSG00000104832	IG_V_pseudogene	Igkv15-102	ENSMUST00000197885	IG_V_pseudogene		6	-1	68466412	287
ENSMUSG00000028967	protein_coding	Errfi1	ENSMUST00000128640	processed_transcript		4	1	150855073	546
ENSMUSG00000029001	protein_coding	Fbxo44	ENSMUST00000129253	nonsense_mediated_decay		4	-1	148160094	1633
ENSMUSG00000095344	unprocessed_pseudogene	Gm6838	ENSMUST00000172851	unprocessed_pseudogene		12	-1	22326042	582
ENSMUSG00000028730	protein_coding	Cfap57	ENSMUST00000081921	protein_coding	principal1	4	-1	118620405	3750
ENSMUSG00000108331	processed_pseudogene	Gm5322	ENSMUST00000206142	processed_pseudogene		7	1	18038476	699
ENSMUSG00000106403	IG_V_gene	Igkv20-101-2	ENSMUST00000200406	IG_V_gene	principal1	6	1	68474613	339
ENSMUSG00000026977	protein_coding	Marchf7	ENSMUST00000102748	protein_coding	principal1	2	1	60209887	3594
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000237503	retained_intron		18	-1	64501955	1648
ENSMUSG00000045598	protein_coding	Zfp553	ENSMUST00000106312	protein_coding	principal1	7	1	127233061	3342
ENSMUSG00000115230	lincRNA	AU022793	ENSMUST00000227886	lincRNA		15	1	39962649	1377
ENSMUSG00000103543	TEC	Gm37669	ENSMUST00000192184	TEC		1	1	153443481	820
ENSMUSG00000045598	protein_coding	Zfp553	ENSMUST00000056232	protein_coding	principal1	7	1	127233255	3043
ENSMUSG00000028967	protein_coding	Errfi1	ENSMUST00000030811	protein_coding	principal1	4	1	150855073	3043
ENSMUSG00000026977	protein_coding	Marchf7	ENSMUST00000143806	processed_transcript		2	1	60209913	4972
ENSMUSG00000026977	protein_coding	Marchf7	ENSMUST00000102747	protein_coding	principal1	2	1	60210073	2271
ENSMUSG00000045598	protein_coding	Zfp553	ENSMUST00000205367	retained_intron		7	1	127233294	827
ENSMUSG00000061983	protein_coding	Rps12	ENSMUST00000218142	nonsense_mediated_decay		10	-1	23786802	474
ENSMUSG00000026977	protein_coding	Marchf7	ENSMUST00000134905	processed_transcript		2	1	60236888	2233
ENSMUSG00000000486	protein_coding	Septin1	ENSMUST00000131208	retained_intron		7	-1	127215125	575
ENSMUSG00000026977	protein_coding	Marchf7	ENSMUST00000126986	processed_transcript		2	1	60243069	3346
ENSMUSG00000047921	protein_coding	Trappc9	ENSMUST00000023276	protein_coding		15	-1	73055810	3301
ENSMUSG00000034459	protein_coding	Ifit1	ENSMUST00000102824	protein_coding	principal1	19	1	34640871	2656
ENSMUSG00000026977	protein_coding	Marchf7	ENSMUST00000142485	protein_coding		2	1	60236754	539
ENSMUSG00000085097	lincRNA	Gm13049	ENSMUST00000133196	lincRNA		4	1	150825733	757
ENSMUSG00000029001	protein_coding	Fbxo44	ENSMUST00000105705	protein_coding		4	-1	148159877	1034
ENSMUSG00000102896	TEC	Gm37852	ENSMUST00000193027	TEC		10	1	118004938	350
ENSMUSG00000026977	protein_coding	Marchf7	ENSMUST00000136367	processed_transcript		2	1	60247343	238
ENSMUSG00000106187	IG_V_pseudogene	Igkv15-101-1	ENSMUST00000196661	IG_V_pseudogene		6	1	68479316	258
ENSMUSG00000026977	protein_coding	Marchf7	ENSMUST00000131813	processed_transcript		2	1	60232103	760
ENSMUSG00000112470	lincRNA	5330439M10Rik	ENSMUST00000218667	lincRNA		10	1	118112517	348
ENSMUSG00000029001	protein_coding	Fbxo44	ENSMUST00000153703	nonsense_mediated_decay		4	-1	148158599	677
ENSMUSG00000105319	IG_V_pseudogene	Igkv15-101	ENSMUST00000195917	IG_V_pseudogene		6	-1	68481719	299
ENSMUSG00000025203	protein_coding	Scd2	ENSMUST00000026221	protein_coding	principal1	19	1	44293674	5455
ENSMUSG00000108583	lincRNA	Gm44854	ENSMUST00000205493	lincRNA		7	1	126837212	2340
ENSMUSG00000026977	protein_coding	Marchf7	ENSMUST00000067542	protein_coding	principal1	2	1	60224769	2244
ENSMUSG00000029001	protein_coding	Fbxo44	ENSMUST00000151246	protein_coding		4	-1	148159649	854
ENSMUSG00000025203	protein_coding	Scd2	ENSMUST00000237039	nonsense_mediated_decay		19	1	44294076	2166
ENSMUSG00000102972	processed_pseudogene	Gm37348	ENSMUST00000193104	processed_pseudogene		3	1	41976335	1789
ENSMUSG00000096515	IG_V_gene	Igkv14-100	ENSMUST00000199510	IG_V_gene	principal5	6	1	68519012	353
ENSMUSG00000096515	IG_V_gene	Igkv14-100	ENSMUST00000103325	IG_V_gene	alternative2	6	1	68519012	350
ENSMUSG00000096921	lincRNA	Gm26822	ENSMUST00000181732	lincRNA		16	1	10827927	3374
ENSMUSG00000103823	processed_pseudogene	Gm7899	ENSMUST00000192935	processed_pseudogene		3	-1	41978048	1897
ENSMUSG00000032413	protein_coding	Rasa2	ENSMUST00000034984	protein_coding	principal1	9	-1	96631617	5813
ENSMUSG00000047921	protein_coding	Trappc9	ENSMUST00000089770	protein_coding	principal1	15	-1	73061204	4048
ENSMUSG00000076525	IG_V_gene	Igkv1-99	ENSMUST00000168090	IG_V_gene	principal5	6	1	68541644	376
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000177236	protein_coding	principal1	7	-1	110844457	4032
ENSMUSG00000076525	IG_V_gene	Igkv1-99	ENSMUST00000103326	IG_V_gene	alternative2	6	1	68541658	359
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000071442	protein_coding	principal2	2	1	25403071	1485
ENSMUSG00000039770	protein_coding	Ypel5	ENSMUST00000045174	protein_coding	principal1	17	1	72836453	3120
ENSMUSG00000032413	protein_coding	Rasa2	ENSMUST00000188853	retained_intron		9	-1	96545179	1072
ENSMUSG00000029001	protein_coding	Fbxo44	ENSMUST00000172472	nonsense_mediated_decay		4	-1	148159875	823
ENSMUSG00000029001	protein_coding	Fbxo44	ENSMUST00000151127	protein_coding		4	-1	148159851	1403
ENSMUSG00000118098	processed_pseudogene	Gm18425	ENSMUST00000236792	processed_pseudogene		19	1	34710008	1009
ENSMUSG00000108770	TEC	Gm44719	ENSMUST00000206404	TEC		7	1	64213190	149
ENSMUSG00000047921	protein_coding	Trappc9	ENSMUST00000170633	protein_coding		15	-1	73061045	4529
ENSMUSG00000003161	protein_coding	Sri	ENSMUST00000088786	protein_coding	principal3	5	1	8046078	2504
ENSMUSG00000108645	TEC	Gm44722	ENSMUST00000206473	TEC		7	-1	64202524	436
ENSMUSG00000029001	protein_coding	Fbxo44	ENSMUST00000122913	nonsense_mediated_decay		4	-1	148159849	676
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000175981	protein_coding		7	-1	110837529	2333
ENSMUSG00000039770	protein_coding	Ypel5	ENSMUST00000233210	protein_coding	principal1	17	1	72837313	2419
ENSMUSG00000029001	protein_coding	Fbxo44	ENSMUST00000173352	protein_coding		4	-1	148160482	793
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000177462	protein_coding		7	-1	110844350	859
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000175648	protein_coding		7	-1	110821283	422
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000236873	nonsense_mediated_decay		18	-1	64516479	2482
ENSMUSG00000039770	protein_coding	Ypel5	ENSMUST00000233886	protein_coding	principal1	17	1	72837536	704
ENSMUSG00000093540	antisense	4930505M18Rik	ENSMUST00000175854	antisense		7	1	37669799	1288
ENSMUSG00000044172	protein_coding	Ptx4	ENSMUST00000054930	protein_coding	principal2	17	1	25120760	1582
ENSMUSG00000039770	protein_coding	Ypel5	ENSMUST00000233221	protein_coding		17	1	72838371	422
ENSMUSG00000029001	protein_coding	Fbxo44	ENSMUST00000167160	protein_coding	principal1	4	-1	148159595	1572
ENSMUSG00000108330	TEC	Gm44882	ENSMUST00000205702	TEC		7	-1	37517854	802
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000020931	protein_coding	principal1	12	1	11265886	5603
ENSMUSG00000037999	protein_coding	Arap2	ENSMUST00000076623	protein_coding	principal1	5	-1	62766120	7306
ENSMUSG00000039770	protein_coding	Ypel5	ENSMUST00000233662	protein_coding		17	1	72840931	306
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000025483	protein_coding	alternative1	18	-1	64516608	2687
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000176048	retained_intron		7	-1	110821608	614
ENSMUSG00000108572	TEC	Gm44883	ENSMUST00000206063	TEC		7	-1	37662638	3258
ENSMUSG00000037999	protein_coding	Arap2	ENSMUST00000200549	retained_intron		5	-1	62638911	3648
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000106682	protein_coding	principal1	7	-1	110844126	1101
ENSMUSG00000003161	protein_coding	Sri	ENSMUST00000148633	protein_coding	alternative1	5	1	8056527	2251
ENSMUSG00000108507	TEC	6720469O03Rik	ENSMUST00000206785	TEC		7	-1	37366630	1201
ENSMUSG00000044172	protein_coding	Ptx4	ENSMUST00000232902	protein_coding	alternative2	17	1	25120777	1473
ENSMUSG00000037999	protein_coding	Arap2	ENSMUST00000160419	retained_intron		5	-1	62646241	795
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000176746	protein_coding		7	-1	110844444	317
ENSMUSG00000037999	protein_coding	Arap2	ENSMUST00000201373	retained_intron		5	-1	62683561	320
ENSMUSG00000044172	protein_coding	Ptx4	ENSMUST00000233502	protein_coding		17	1	25120777	1118
ENSMUSG00000044172	protein_coding	Ptx4	ENSMUST00000233641	nonsense_mediated_decay		17	1	25120928	1100
ENSMUSG00000009378	protein_coding	Slc16a12	ENSMUST00000009522	protein_coding	principal1	19	-1	34747289	4051
ENSMUSG00000037999	protein_coding	Arap2	ENSMUST00000161911	processed_transcript		5	-1	62730821	413
ENSMUSG00000032413	protein_coding	Rasa2	ENSMUST00000128346	nonsense_mediated_decay		9	-1	96631536	1987
ENSMUSG00000003161	protein_coding	Sri	ENSMUST00000145119	retained_intron		5	1	8056558	400
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000176716	protein_coding		7	-1	110844402	1080
ENSMUSG00000009378	protein_coding	Slc16a12	ENSMUST00000235650	processed_transcript		19	-1	34691547	360
ENSMUSG00000037999	protein_coding	Arap2	ENSMUST00000159470	protein_coding		5	-1	62766159	1161
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000177520	protein_coding		7	-1	110844157	419
ENSMUSG00000032413	protein_coding	Rasa2	ENSMUST00000144376	retained_intron		9	-1	96572043	3961
ENSMUSG00000061983	protein_coding	Rps12	ENSMUST00000218107	protein_coding	principal1	10	-1	23787275	584
ENSMUSG00000105694	TEC	Gm43237	ENSMUST00000196835	TEC		5	-1	62613458	1044
ENSMUSG00000030788	protein_coding	Rnf141	ENSMUST00000210070	retained_intron		7	-1	110844392	4423
ENSMUSG00000032413	protein_coding	Rasa2	ENSMUST00000185435	retained_intron		9	-1	96563875	6579
ENSMUSG00000032413	protein_coding	Rasa2	ENSMUST00000190537	retained_intron		9	-1	96580606	433
ENSMUSG00000100522	processed_pseudogene	Gm19280	ENSMUST00000190191	processed_pseudogene		9	1	96584303	205
ENSMUSG00000061983	protein_coding	Rps12	ENSMUST00000220171	retained_intron		10	-1	23787202	1795
ENSMUSG00000108723	lincRNA	Gm44837	ENSMUST00000206863	lincRNA		7	-1	34637712	717
ENSMUSG00000042708	protein_coding	Shcbp1l	ENSMUST00000042373	protein_coding	principal1	1	1	153425162	2092
ENSMUSG00000061983	protein_coding	Rps12	ENSMUST00000220070	protein_coding	principal1	10	-1	23787089	494
ENSMUSG00000061983	protein_coding	Rps12	ENSMUST00000218221	protein_coding		10	-1	23787217	460
ENSMUSG00000040405	protein_coding	Havcr1	ENSMUST00000081819	protein_coding	alternative2	11	1	46740061	2030
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000218022	nonsense_mediated_decay		12	1	11266105	5272
ENSMUSG00000061983	protein_coding	Rps12	ENSMUST00000219783	retained_intron		10	-1	23785994	488
ENSMUSG00000085760	antisense	Gm14302	ENSMUST00000122806	antisense		2	-1	164460955	382
ENSMUSG00000042708	protein_coding	Shcbp1l	ENSMUST00000136614	nonsense_mediated_decay		1	1	153425172	2375
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000218866	protein_coding		12	1	11266129	3373
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000206763	protein_coding		7	-1	37568390	5376
ENSMUSG00000042708	protein_coding	Shcbp1l	ENSMUST00000137861	retained_intron		1	1	153445363	682
ENSMUSG00000061983	protein_coding	Rps12	ENSMUST00000073926	protein_coding		10	-1	23787188	490
ENSMUSG00000003161	protein_coding	Sri	ENSMUST00000144265	retained_intron		5	1	8056562	531
ENSMUSG00000006127	protein_coding	Inpp5k	ENSMUST00000006286	protein_coding	principal1	11	1	75630988	2679
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000176129	protein_coding		7	-1	37479986	2541
ENSMUSG00000061983	protein_coding	Rps12	ENSMUST00000218185	retained_intron		10	-1	23786512	663
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000219041	processed_transcript		12	1	11266130	446
ENSMUSG00000026683	protein_coding	Nuf2	ENSMUST00000111368	protein_coding	principal2	1	-1	169531464	2405
ENSMUSG00000089696	protein_coding	Spopfm1	ENSMUST00000159517	protein_coding	principal1	3	1	94264036	1241
ENSMUSG00000061983	protein_coding	Rps12	ENSMUST00000217883	retained_intron		10	-1	23787179	864
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000217906	nonsense_mediated_decay		12	1	11266169	462
ENSMUSG00000022816	protein_coding	Fstl1	ENSMUST00000114763	protein_coding	principal1	16	1	37776873	3789
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000102626	protein_coding	principal1	7	-1	47133684	3137
ENSMUSG00000089696	protein_coding	Spopfm1	ENSMUST00000098878	protein_coding		3	1	94265687	1098
ENSMUSG00000040405	protein_coding	Havcr1	ENSMUST00000109223	protein_coding	alternative2	11	1	46750511	1982
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000136138	processed_transcript		2	1	25404085	1510
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000219776	nonsense_mediated_decay		12	1	11266201	460
ENSMUSG00000113659	unprocessed_pseudogene	Gm49248	ENSMUST00000223082	unprocessed_pseudogene		12	-1	22414924	573
ENSMUSG00000110759	processed_pseudogene	Gm6607	ENSMUST00000215035	processed_pseudogene		9	-1	22330500	328
ENSMUSG00000020267	protein_coding	Hint1	ENSMUST00000020504	protein_coding	principal1	11	1	54866383	636
ENSMUSG00000089891	unprocessed_pseudogene	Gm16561	ENSMUST00000163001	unprocessed_pseudogene		3	-1	94275424	192
ENSMUSG00000040405	protein_coding	Havcr1	ENSMUST00000047568	protein_coding	principal3	11	1	46751168	1892
ENSMUSG00000003161	protein_coding	Sri	ENSMUST00000149420	retained_intron		5	1	8056608	1111
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000218958	processed_transcript		12	1	11266508	415
ENSMUSG00000028653	protein_coding	Trit1	ENSMUST00000102649	protein_coding	principal1	4	1	123016597	2074
ENSMUSG00000038013	protein_coding	Wipf2	ENSMUST00000142414	protein_coding		11	1	98863638	660
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000132287	processed_transcript		2	1	25400469	757
ENSMUSG00000022816	protein_coding	Fstl1	ENSMUST00000152579	processed_transcript		16	1	37777055	777
ENSMUSG00000017720	protein_coding	Trp53tg5	ENSMUST00000017864	protein_coding	principal1	2	-1	164473724	934
ENSMUSG00000020267	protein_coding	Hint1	ENSMUST00000117710	protein_coding		11	1	54866481	580
ENSMUSG00000098099	processed_pseudogene	Gm7456	ENSMUST00000182862	processed_pseudogene		12	1	49140256	1011
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000220289	retained_intron		12	1	11290769	3918
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000212883	protein_coding		8	1	123423527	389
ENSMUSG00000003161	protein_coding	Sri	ENSMUST00000003245	retained_intron		5	1	8059342	640
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000217930	protein_coding		12	1	11291727	463
ENSMUSG00000003161	protein_coding	Sri	ENSMUST00000197065	retained_intron		5	1	8061266	1206
ENSMUSG00000076526	IG_V_gene	Igkv12-98	ENSMUST00000196839	IG_V_gene	principal5	6	1	68570763	347
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000147147	protein_coding	principal3	2	-1	24919614	5953
ENSMUSG00000076526	IG_V_gene	Igkv12-98	ENSMUST00000103327	IG_V_gene	alternative2	6	1	68570763	344
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000144413	processed_transcript		2	1	25403107	893
ENSMUSG00000022816	protein_coding	Fstl1	ENSMUST00000125279	processed_transcript		16	1	37777075	486
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000217991	protein_coding		12	1	11294523	536
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000237369	nonsense_mediated_decay		18	-1	64516555	2103
ENSMUSG00000108130	lincRNA	Gm30781	ENSMUST00000204743	lincRNA		6	-1	48798826	216
ENSMUSG00000118472	unprocessed_pseudogene	Gm21775	ENSMUST00000238556	unprocessed_pseudogene		Y	1	10553453	540
ENSMUSG00000105817	IG_V_pseudogene	Igkv15-97	ENSMUST00000197637	IG_V_pseudogene		6	1	68591374	339
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000218319	processed_transcript		12	1	11300656	3470
ENSMUSG00000016982	protein_coding	Pom121l2	ENSMUST00000117882	protein_coding	alternative2	13	1	21981194	1943
ENSMUSG00000118422	unprocessed_pseudogene	Gm21900	ENSMUST00000238509	unprocessed_pseudogene		Y	1	10616361	543
ENSMUSG00000026683	protein_coding	Nuf2	ENSMUST00000028000	protein_coding	principal2	1	-1	169531428	2068
ENSMUSG00000112651	processed_pseudogene	Gm18623	ENSMUST00000219860	processed_pseudogene		12	1	49323943	953
ENSMUSG00000022816	protein_coding	Fstl1	ENSMUST00000135668	retained_intron		16	1	37777152	343
ENSMUSG00000020608	protein_coding	Smc6	ENSMUST00000218815	protein_coding		12	1	11314704	470
ENSMUSG00000107574	processed_pseudogene	Gm17834	ENSMUST00000204322	processed_pseudogene		6	1	48819024	891
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000154809	protein_coding		2	1	25403169	510
ENSMUSG00000094772	transcribed_processed_pseudogene	Rpl29-ps2	ENSMUST00000222043	processed_transcript		13	1	4609334	1036
ENSMUSG00000022816	protein_coding	Fstl1	ENSMUST00000127495	processed_transcript		16	1	37815706	298
ENSMUSG00000094772	transcribed_processed_pseudogene	Rpl29-ps2	ENSMUST00000220540	processed_transcript		13	1	4609660	1165
ENSMUSG00000016982	protein_coding	Pom121l2	ENSMUST00000017126	protein_coding	principal4	13	1	21981520	2960
ENSMUSG00000112763	lincRNA	Gm34304	ENSMUST00000218927	lincRNA		12	-1	49381885	1139
ENSMUSG00000026683	protein_coding	Nuf2	ENSMUST00000195342	protein_coding		1	-1	169522382	513
ENSMUSG00000094772	transcribed_processed_pseudogene	Rpl29-ps2	ENSMUST00000086508	transcribed_processed_pseudogene		13	1	4614182	478
ENSMUSG00000022816	protein_coding	Fstl1	ENSMUST00000123077	processed_transcript		16	1	37822702	884
ENSMUSG00000094420	IG_V_gene	Igkv10-96	ENSMUST00000103328	IG_V_gene	principal1	6	-1	68632442	359
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000055921	protein_coding	alternative2	2	1	25403171	1412
ENSMUSG00000113344	processed_pseudogene	Gm49251	ENSMUST00000221984	processed_pseudogene		12	-1	22466718	133
ENSMUSG00000026683	protein_coding	Nuf2	ENSMUST00000192248	protein_coding	alternative2	1	-1	169531411	1271
ENSMUSG00000118083	processed_pseudogene	Gm50173	ENSMUST00000237775	processed_pseudogene		19	1	34773881	571
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000141106	processed_transcript		2	1	25403239	627
ENSMUSG00000028744	protein_coding	Pqlc2	ENSMUST00000139840	nonsense_mediated_decay		4	-1	139310685	2115
ENSMUSG00000100369	lincRNA	Gm29527	ENSMUST00000190722	lincRNA		Y	1	10626743	622
ENSMUSG00000026683	protein_coding	Nuf2	ENSMUST00000194831	retained_intron		1	-1	169531418	3888
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000156824	processed_transcript		2	1	25403448	645
ENSMUSG00000117945	processed_pseudogene	Gm50116	ENSMUST00000237604	processed_pseudogene		19	1	34804262	498
ENSMUSG00000028653	protein_coding	Trit1	ENSMUST00000147165	processed_transcript		4	1	123016597	1964
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000124277	processed_transcript		2	1	25399351	738
ENSMUSG00000006127	protein_coding	Inpp5k	ENSMUST00000136605	retained_intron		11	1	75631029	3381
ENSMUSG00000038013	protein_coding	Wipf2	ENSMUST00000037480	protein_coding	principal1	11	1	98863638	7011
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000133409	protein_coding		2	1	25406307	1128
ENSMUSG00000090781	IG_V_pseudogene	Igkv2-95-2	ENSMUST00000166362	IG_V_pseudogene		6	-1	68648121	222
ENSMUSG00000104788	unprocessed_pseudogene	Gm36448	ENSMUST00000199916	unprocessed_pseudogene		14	-1	52540876	438
ENSMUSG00000028653	protein_coding	Trit1	ENSMUST00000141855	processed_transcript		4	1	123048756	512
ENSMUSG00000006127	protein_coding	Inpp5k	ENSMUST00000129298	retained_intron		11	1	75631037	2075
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000237585	retained_intron		18	-1	64516437	2268
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000131185	processed_transcript		2	1	25407282	1119
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000134775	nonsense_mediated_decay		2	-1	24806355	1971
ENSMUSG00000028744	protein_coding	Pqlc2	ENSMUST00000053862	protein_coding	principal2	4	-1	139310708	1532
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000209161	retained_intron		7	-1	47132326	3296
ENSMUSG00000038013	protein_coding	Wipf2	ENSMUST00000132006	retained_intron		11	1	98864117	1846
ENSMUSG00000006127	protein_coding	Inpp5k	ENSMUST00000150857	nonsense_mediated_decay		11	1	75631055	2571
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000237351	protein_coding		18	-1	64516426	1492
ENSMUSG00000006127	protein_coding	Inpp5k	ENSMUST00000130318	retained_intron		11	1	75639137	841
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000236186	protein_coding		18	-1	64516515	1784
ENSMUSG00000038013	protein_coding	Wipf2	ENSMUST00000148439	retained_intron		11	1	98891173	391
ENSMUSG00000006127	protein_coding	Inpp5k	ENSMUST00000149134	processed_transcript		11	1	75646786	677
ENSMUSG00000028744	protein_coding	Pqlc2	ENSMUST00000172747	protein_coding	principal2	4	-1	139310665	1405
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000128144	processed_transcript		2	1	25407692	1159
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000235887	retained_intron		18	-1	64505050	434
ENSMUSG00000006127	protein_coding	Inpp5k	ENSMUST00000139856	protein_coding		11	1	75646846	492
ENSMUSG00000045854	protein_coding	Lyrm2	ENSMUST00000062802	protein_coding	principal1	4	1	32800253	465
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000236392	nonsense_mediated_decay		18	-1	64516498	935
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000138651	processed_transcript		2	1	25408873	497
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000152594	protein_coding	principal1	9	-1	96752831	7406
ENSMUSG00000028145	protein_coding	Them4	ENSMUST00000049822	protein_coding	principal1	3	1	94310089	1781
ENSMUSG00000028744	protein_coding	Pqlc2	ENSMUST00000105801	protein_coding	alternative2	4	-1	139310678	2756
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000237831	retained_intron		18	-1	64511877	774
ENSMUSG00000015094	protein_coding	Npdc1	ENSMUST00000141567	protein_coding		2	1	25403194	754
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000236583	nonsense_mediated_decay		18	-1	64516545	845
ENSMUSG00000045854	protein_coding	Lyrm2	ENSMUST00000135833	retained_intron		4	1	32800279	889
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000126066	non_stop_decay		9	-1	96719850	2937
ENSMUSG00000045854	protein_coding	Lyrm2	ENSMUST00000130321	retained_intron		4	1	32800282	420
ENSMUSG00000028145	protein_coding	Them4	ENSMUST00000196824	retained_intron		3	1	94310130	940
ENSMUSG00000028744	protein_coding	Pqlc2	ENSMUST00000141007	nonsense_mediated_decay		4	-1	139310637	684
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000235647	nonsense_mediated_decay		18	-1	64516480	874
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000033142	protein_coding	principal1	7	-1	47132717	3145
ENSMUSG00000017561	protein_coding	Crlf3	ENSMUST00000103233	protein_coding		11	-1	80080938	2230
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000140121	protein_coding		9	-1	96720300	2673
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000236463	nonsense_mediated_decay		18	-1	64516508	894
ENSMUSG00000110058	lincRNA	Gm5907	ENSMUST00000209784	lincRNA		8	1	13986090	514
ENSMUSG00000079013	protein_coding	Serpina3j	ENSMUST00000109957	protein_coding	principal1	12	1	104314553	2155
ENSMUSG00000110058	lincRNA	Gm5907	ENSMUST00000210969	lincRNA		8	1	13998940	661
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000128269	protein_coding		9	-1	96719565	929
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000235325	protein_coding		18	-1	64516528	761
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000143906	processed_transcript		9	-1	96729036	155
ENSMUSG00000024587	protein_coding	Nars	ENSMUST00000237027	retained_intron		18	-1	64516499	848
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000208324	retained_intron		7	-1	47091336	2165
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000147314	processed_transcript		9	-1	96731341	469
ENSMUSG00000056004	protein_coding	9330182L06Rik	ENSMUST00000134991	protein_coding	alternative2	5	1	9266132	4115
ENSMUSG00000100898	transcribed_unprocessed_pseudogene	Gm29178	ENSMUST00000188496	processed_transcript		Y	-1	72415274	1013
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000130078	retained_intron		9	-1	96752685	2341
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000208531	retained_intron		7	-1	47088568	694
ENSMUSG00000039329	protein_coding	Tex19.1	ENSMUST00000039088	protein_coding	principal1	11	1	121146143	1745
ENSMUSG00000028145	protein_coding	Them4	ENSMUST00000198494	retained_intron		3	1	94310136	2258
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000137858	processed_transcript		9	-1	96732770	440
ENSMUSG00000081941	processed_pseudogene	Gm11218	ENSMUST00000121364	processed_pseudogene		4	-1	64858139	1214
ENSMUSG00000022658	protein_coding	Tagln3	ENSMUST00000096057	protein_coding	principal1	16	-1	45724608	1240
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000124186	retained_intron		9	-1	96732669	609
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000207172	retained_intron		7	-1	47133437	1874
ENSMUSG00000105506	transcribed_processed_pseudogene	Gm43743	ENSMUST00000197898	processed_transcript		3	-1	94335090	697
ENSMUSG00000039329	protein_coding	Tex19.1	ENSMUST00000155694	protein_coding		11	1	121146157	406
ENSMUSG00000024233	protein_coding	Lyzl1	ENSMUST00000025076	protein_coding	principal1	18	1	4165832	846
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000208437	processed_transcript		7	-1	47112703	348
ENSMUSG00000105506	transcribed_processed_pseudogene	Gm43743	ENSMUST00000198353	transcribed_processed_pseudogene		3	-1	94335332	491
ENSMUSG00000086206	processed_transcript	Gm13783	ENSMUST00000131634	processed_transcript		2	-1	91202778	732
ENSMUSG00000102610	TEC	Gm37846	ENSMUST00000191840	TEC		3	1	42163865	3774
ENSMUSG00000047921	protein_coding	Trappc9	ENSMUST00000230270	processed_transcript		15	-1	73061045	2968
ENSMUSG00000076759	TR_V_gene	Trav2	ENSMUST00000196939	TR_V_gene	principal5	14	1	52567198	423
ENSMUSG00000104089	processed_pseudogene	Gm38274	ENSMUST00000195689	processed_pseudogene		3	-1	42362777	148
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000209179	processed_transcript		7	-1	47133416	673
ENSMUSG00000024233	protein_coding	Lyzl1	ENSMUST00000120837	protein_coding		18	1	4165862	652
ENSMUSG00000076759	TR_V_gene	Trav2	ENSMUST00000103568	TR_V_gene	alternative2	14	1	52567293	325
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000046227	protein_coding	alternative2	2	-1	24919574	4554
ENSMUSG00000056004	protein_coding	9330182L06Rik	ENSMUST00000069538	protein_coding	principal2	5	1	9266132	4688
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000132060	retained_intron		9	-1	96752727	1799
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000209184	processed_transcript		7	-1	47133577	765
ENSMUSG00000103426	TEC	Gm37533	ENSMUST00000193848	TEC		3	1	42572458	545
ENSMUSG00000053985	protein_coding	Zfp14	ENSMUST00000207873	protein_coding	principal1	7	-1	30051380	3411
ENSMUSG00000047921	protein_coding	Trappc9	ENSMUST00000230025	retained_intron		15	-1	73061050	2639
ENSMUSG00000110598	TEC	Gm45854	ENSMUST00000211857	TEC		8	1	95468646	3488
ENSMUSG00000075359	unprocessed_pseudogene	Gm20775	ENSMUST00000100115	unprocessed_pseudogene		Y	-1	10643107	1851
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000207344	retained_intron		7	-1	47113471	393
ENSMUSG00000047921	protein_coding	Trappc9	ENSMUST00000228960	protein_coding		15	-1	73061050	2689
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000143403	processed_transcript		9	-1	96752693	566
ENSMUSG00000056004	protein_coding	9330182L06Rik	ENSMUST00000115348	protein_coding	alternative2	5	1	9266149	3403
ENSMUSG00000110635	TEC	Gm45853	ENSMUST00000212310	TEC		8	-1	95483623	3171
ENSMUSG00000017561	protein_coding	Crlf3	ENSMUST00000061283	protein_coding	principal1	11	-1	80080991	2396
ENSMUSG00000041144	protein_coding	Dnah7b	ENSMUST00000188209	retained_intron		1	1	46066315	631
ENSMUSG00000053985	protein_coding	Zfp14	ENSMUST00000207072	protein_coding	principal1	7	-1	30051373	2835
ENSMUSG00000039321	protein_coding	Uts2r	ENSMUST00000039044	protein_coding	principal1	11	1	121160271	1703
ENSMUSG00000030854	protein_coding	Ptpn5	ENSMUST00000209057	processed_transcript		7	-1	47133576	589
ENSMUSG00000096173	processed_pseudogene	Gm3150	ENSMUST00000166418	processed_pseudogene		15	1	72913357	204
ENSMUSG00000056004	protein_coding	9330182L06Rik	ENSMUST00000154662	nonsense_mediated_decay		5	1	9266175	2909
ENSMUSG00000040433	protein_coding	Zbtb38	ENSMUST00000093798	protein_coding	principal1	9	-1	96731675	4091
ENSMUSG00000053985	protein_coding	Zfp14	ENSMUST00000077787	protein_coding	principal1	7	-1	30044734	1506
ENSMUSG00000100898	transcribed_unprocessed_pseudogene	Gm29178	ENSMUST00000186312	processed_transcript		Y	-1	72415274	1104
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000026973	protein_coding	principal1	5	-1	139129759	2637
ENSMUSG00000002108	protein_coding	Nr1h3	ENSMUST00000150654	retained_intron		2	-1	91195025	1985
ENSMUSG00000106847	sense_intronic	Peg13	ENSMUST00000202826	sense_intronic		15	-1	72810324	4725
ENSMUSG00000056004	protein_coding	9330182L06Rik	ENSMUST00000142202	retained_intron		5	1	9417615	745
ENSMUSG00000113717	lincRNA	Gm40658	ENSMUST00000221900	lincRNA		13	1	4643907	701
ENSMUSG00000113717	lincRNA	Gm40658	ENSMUST00000220455	lincRNA		13	1	4725459	906
ENSMUSG00000102097	antisense	A930006L05Rik	ENSMUST00000186821	antisense		9	1	96705828	2814
ENSMUSG00000113717	lincRNA	Gm40658	ENSMUST00000222210	lincRNA		13	1	4725459	1070
ENSMUSG00000109501	antisense	Gm14377	ENSMUST00000207045	antisense		7	1	47110851	2094
ENSMUSG00000100898	transcribed_unprocessed_pseudogene	Gm29178	ENSMUST00000189271	processed_transcript		Y	-1	72415186	302
ENSMUSG00000021572	protein_coding	Cep72	ENSMUST00000222609	protein_coding		13	-1	74062241	3231
ENSMUSG00000101691	unprocessed_pseudogene	Gm29280	ENSMUST00000188571	unprocessed_pseudogene		Y	1	35271723	615
ENSMUSG00000017561	protein_coding	Crlf3	ENSMUST00000177825	nonsense_mediated_decay		11	-1	80080912	1151
ENSMUSG00000076760	TR_V_gene	Trav3-1	ENSMUST00000103569	TR_V_gene	principal1	14	1	52580665	385
ENSMUSG00000100898	transcribed_unprocessed_pseudogene	Gm29178	ENSMUST00000190636	processed_transcript		Y	-1	72415190	543
ENSMUSG00000051978	protein_coding	Erich1	ENSMUST00000110813	protein_coding	principal1	8	-1	14090301	1557
ENSMUSG00000104516	TEC	Gm9884	ENSMUST00000194343	TEC		1	1	25830657	1222
ENSMUSG00000111901	transcribed_processed_pseudogene	Gm6150	ENSMUST00000217775	transcribed_processed_pseudogene		10	1	9683908	577
ENSMUSG00000081835	processed_pseudogene	Gm11790	ENSMUST00000119569	processed_pseudogene		11	-1	121165925	455
ENSMUSG00000100898	transcribed_unprocessed_pseudogene	Gm29178	ENSMUST00000186224	processed_transcript		Y	-1	72415192	655
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000114432	protein_coding	alternative2	2	-1	24919574	4539
ENSMUSG00000017561	protein_coding	Crlf3	ENSMUST00000178893	nonsense_mediated_decay		11	-1	80080929	1138
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000110890	protein_coding	principal1	5	-1	139130386	2626
ENSMUSG00000067028	protein_coding	Cntnap5b	ENSMUST00000086738	protein_coding	principal1	1	1	99772765	4027
ENSMUSG00000073045	lincRNA	Gm5570	ENSMUST00000101355	lincRNA		6	1	60031967	2527
ENSMUSG00000100898	transcribed_unprocessed_pseudogene	Gm29178	ENSMUST00000185816	processed_transcript		Y	-1	72413253	138
ENSMUSG00000073045	lincRNA	Gm5570	ENSMUST00000082153	lincRNA		6	1	60082484	534
ENSMUSG00000051978	protein_coding	Erich1	ENSMUST00000211242	protein_coding		8	-1	14090279	422
ENSMUSG00000100898	transcribed_unprocessed_pseudogene	Gm29178	ENSMUST00000187819	processed_transcript		Y	-1	72413255	324
ENSMUSG00000111901	transcribed_processed_pseudogene	Gm6150	ENSMUST00000219888	processed_transcript		10	1	9684722	2977
ENSMUSG00000021773	protein_coding	Comtd1	ENSMUST00000124549	protein_coding	principal1	14	-1	21848977	2314
ENSMUSG00000067028	protein_coding	Cntnap5b	ENSMUST00000188735	protein_coding		1	1	100097761	4007
ENSMUSG00000100898	transcribed_unprocessed_pseudogene	Gm29178	ENSMUST00000187750	processed_transcript		Y	-1	72415174	397
ENSMUSG00000017561	protein_coding	Crlf3	ENSMUST00000092858	processed_transcript		11	-1	80080936	1186
ENSMUSG00000109982	TEC	Gm45520	ENSMUST00000210109	TEC		8	-1	14067818	2031
ENSMUSG00000100898	transcribed_unprocessed_pseudogene	Gm29178	ENSMUST00000188915	processed_transcript		Y	-1	72413255	229
ENSMUSG00000017561	protein_coding	Crlf3	ENSMUST00000147164	retained_intron		11	-1	80057899	476
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000102938	protein_coding	alternative2	2	-1	24919591	4680
ENSMUSG00000100540	unprocessed_pseudogene	Gm20799	ENSMUST00000185833	unprocessed_pseudogene		Y	1	35301254	696
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000110889	protein_coding		5	-1	139114054	2457
ENSMUSG00000100898	transcribed_unprocessed_pseudogene	Gm29178	ENSMUST00000186784	transcribed_unprocessed_pseudogene		Y	-1	72413692	615
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000139415	processed_transcript		5	-1	139023810	390
ENSMUSG00000101581	processed_transcript	C430002N11Rik	ENSMUST00000189815	retained_intron		9	1	96765562	665
ENSMUSG00000117542	processed_pseudogene	Gm18763	ENSMUST00000234387	processed_pseudogene		18	-1	7692726	983
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000148002	protein_coding		5	-1	139127805	795
ENSMUSG00000067028	protein_coding	Cntnap5b	ENSMUST00000185484	processed_transcript		1	1	100252629	604
ENSMUSG00000017561	protein_coding	Crlf3	ENSMUST00000179855	nonsense_mediated_decay		11	-1	80080861	436
ENSMUSG00000100244	unprocessed_pseudogene	Gm29279	ENSMUST00000190324	unprocessed_pseudogene		Y	1	35350343	696
ENSMUSG00000082431	processed_pseudogene	Prdx2-ps1	ENSMUST00000117372	processed_pseudogene		1	-1	99791025	597
ENSMUSG00000021773	protein_coding	Comtd1	ENSMUST00000022295	retained_intron		14	-1	21848894	981
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000091348	protein_coding	alternative2	2	-1	24919587	4615
ENSMUSG00000117462	processed_pseudogene	Gm50027	ENSMUST00000234378	processed_pseudogene		18	-1	7844935	252
ENSMUSG00000104104	TEC	Gm37877	ENSMUST00000191630	TEC		1	1	99847984	2709
ENSMUSG00000017561	protein_coding	Crlf3	ENSMUST00000178280	retained_intron		11	-1	80080938	1871
ENSMUSG00000021773	protein_coding	Comtd1	ENSMUST00000152905	retained_intron		14	-1	21847810	440
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000129851	protein_coding		5	-1	139130159	918
ENSMUSG00000100662	processed_pseudogene	Gm19029	ENSMUST00000189923	processed_pseudogene		1	1	100006021	564
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000141985	protein_coding		5	-1	139112644	402
ENSMUSG00000021773	protein_coding	Comtd1	ENSMUST00000177527	protein_coding		14	-1	21848687	714
ENSMUSG00000099835	processed_pseudogene	Gm29668	ENSMUST00000187802	processed_pseudogene		1	-1	100282643	315
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000147505	protein_coding		5	-1	139130576	440
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000138805	retained_intron		2	-1	24825384	811
ENSMUSG00000100794	processed_pseudogene	Gm29667	ENSMUST00000190817	processed_pseudogene		1	1	100282791	490
ENSMUSG00000000486	protein_coding	Septin1	ENSMUST00000106314	protein_coding	principal1	7	-1	127218498	1486
ENSMUSG00000046768	protein_coding	Rhoj	ENSMUST00000118602	protein_coding		12	1	75308322	2396
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000152636	nonsense_mediated_decay		2	-1	24839591	865
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000155833	protein_coding		5	-1	139150001	426
ENSMUSG00000101581	processed_transcript	C430002N11Rik	ENSMUST00000188819	retained_intron		9	1	96765575	1660
ENSMUSG00000046768	protein_coding	Rhoj	ENSMUST00000118966	protein_coding		12	1	75308322	4892
ENSMUSG00000115152	processed_pseudogene	Gm49253	ENSMUST00000226734	processed_pseudogene		15	-1	39991664	466
ENSMUSG00000021572	protein_coding	Cep72	ENSMUST00000036456	protein_coding	principal1	13	-1	74062299	3641
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000134762	protein_coding		5	-1	139130383	367
ENSMUSG00000025855	protein_coding	Prkar1b	ENSMUST00000130180	processed_transcript		5	-1	139149957	380
ENSMUSG00000115739	TEC	Gm49254	ENSMUST00000228464	TEC		15	-1	40014778	1976
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000144672	processed_transcript		2	-1	24807282	416
ENSMUSG00000101581	processed_transcript	C430002N11Rik	ENSMUST00000189067	lincRNA		9	1	96765575	1029
ENSMUSG00000000486	protein_coding	Septin1	ENSMUST00000106313	protein_coding		7	-1	127218303	1285
ENSMUSG00000101581	processed_transcript	C430002N11Rik	ENSMUST00000191375	retained_intron		9	1	96765585	616
ENSMUSG00000115712	processed_pseudogene	Gm49255	ENSMUST00000226568	processed_pseudogene		15	-1	40043134	153
ENSMUSG00000101581	processed_transcript	C430002N11Rik	ENSMUST00000190054	lincRNA		9	1	96765601	443
ENSMUSG00000000486	protein_coding	Septin1	ENSMUST00000152267	protein_coding		7	-1	127218471	1048
ENSMUSG00000100383	processed_pseudogene	Gm28688	ENSMUST00000187301	processed_pseudogene		9	1	96809756	268
ENSMUSG00000115142	lincRNA	Gm33251	ENSMUST00000227360	lincRNA		15	1	40045191	1086
ENSMUSG00000100922	processed_pseudogene	Gm8520	ENSMUST00000186517	processed_pseudogene		9	-1	96814334	868
ENSMUSG00000046768	protein_coding	Rhoj	ENSMUST00000055390	protein_coding	principal1	12	1	75308322	2350
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000175941	protein_coding	principal1	7	-1	37769624	4423
ENSMUSG00000021572	protein_coding	Cep72	ENSMUST00000223028	nonsense_mediated_decay		13	-1	74062261	5205
ENSMUSG00000000486	protein_coding	Septin1	ENSMUST00000133591	retained_intron		7	-1	127217039	789
ENSMUSG00000021572	protein_coding	Cep72	ENSMUST00000223417	retained_intron		13	-1	74052241	4478
ENSMUSG00000032715	protein_coding	Trib3	ENSMUST00000040312	protein_coding	principal1	2	-1	152344032	2026
ENSMUSG00000021572	protein_coding	Cep72	ENSMUST00000221122	protein_coding		13	-1	74051496	1346
ENSMUSG00000046768	protein_coding	Rhoj	ENSMUST00000146096	retained_intron		12	1	75308673	630
ENSMUSG00000000486	protein_coding	Septin1	ENSMUST00000142356	protein_coding		7	-1	127218390	706
ENSMUSG00000032715	protein_coding	Trib3	ENSMUST00000123145	processed_transcript		2	-1	152343988	639
ENSMUSG00000000486	protein_coding	Septin1	ENSMUST00000133913	protein_coding		7	-1	127232646	599
ENSMUSG00000021572	protein_coding	Cep72	ENSMUST00000223031	processed_transcript		13	-1	74056101	370
ENSMUSG00000032715	protein_coding	Trib3	ENSMUST00000124995	retained_intron		2	-1	152343970	504
ENSMUSG00000021572	protein_coding	Cep72	ENSMUST00000220483	nonsense_mediated_decay		13	-1	74062299	343
ENSMUSG00000046768	protein_coding	Rhoj	ENSMUST00000172981	nonsense_mediated_decay		12	1	75308881	488
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000056338	protein_coding	principal1	7	-1	37769962	4621
ENSMUSG00000000486	protein_coding	Septin1	ENSMUST00000133733	retained_intron		7	-1	127218426	821
ENSMUSG00000000486	protein_coding	Septin1	ENSMUST00000138541	processed_transcript		7	-1	127218231	242
ENSMUSG00000118541	protein_coding	AC132407.1	ENSMUST00000239000	protein_coding	principal1	8	-1	31918758	186
ENSMUSG00000027363	protein_coding	Usp8	ENSMUST00000028841	protein_coding	principal3	2	1	126707343	4145
ENSMUSG00000000486	protein_coding	Septin1	ENSMUST00000205570	retained_intron		7	-1	127233130	713
ENSMUSG00000017734	protein_coding	Dbndd2	ENSMUST00000109350	protein_coding	principal1	2	1	164486106	1055
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000176114	protein_coding	principal1	7	-1	37770980	4341
ENSMUSG00000117309	transcribed_unitary_pseudogene	Gm49960	ENSMUST00000233200	transcribed_unitary_pseudogene		16	-1	10938364	7292
ENSMUSG00000032840	protein_coding	2410131K14Rik	ENSMUST00000049138	protein_coding	principal1	5	1	118245227	5649
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000200655	nonsense_mediated_decay		2	-1	24919590	2582
ENSMUSG00000066682	protein_coding	Pilrb2	ENSMUST00000197411	retained_intron		5	-1	137866930	448
ENSMUSG00000025176	protein_coding	Hoga1	ENSMUST00000168414	processed_transcript		19	1	42045610	820
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000176205	protein_coding	principal1	7	-1	37772875	4372
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000150836	nonsense_mediated_decay		2	-1	24852732	756
ENSMUSG00000005686	protein_coding	Ampd3	ENSMUST00000170374	protein_coding	principal2	7	1	110768206	3489
ENSMUSG00000066682	protein_coding	Pilrb2	ENSMUST00000198024	nonsense_mediated_decay		5	-1	137868650	459
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000176680	protein_coding		7	-1	37770782	818
ENSMUSG00000066682	protein_coding	Pilrb2	ENSMUST00000199247	protein_coding		5	-1	137871085	443
ENSMUSG00000037991	protein_coding	Rmi2	ENSMUST00000037913	protein_coding	principal1	16	1	10835059	3742
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000139000	retained_intron		2	-1	24919579	3651
ENSMUSG00000017734	protein_coding	Dbndd2	ENSMUST00000149287	nonsense_mediated_decay		2	1	164486455	1051
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000176534	protein_coding		7	-1	37773641	738
ENSMUSG00000005686	protein_coding	Ampd3	ENSMUST00000176487	processed_transcript		7	1	110768343	345
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000207383	protein_coding		2	-1	24863923	695
ENSMUSG00000005686	protein_coding	Ampd3	ENSMUST00000213373	protein_coding	alternative2	7	1	110768911	3337
ENSMUSG00000039963	protein_coding	Ccdc40	ENSMUST00000235971	nonsense_mediated_decay		11	1	119228572	4979
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000176137	processed_transcript		7	-1	37773577	1062
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000152325	protein_coding		2	-1	24877516	671
ENSMUSG00000025176	protein_coding	Hoga1	ENSMUST00000172244	protein_coding		19	1	42045792	631
ENSMUSG00000037991	protein_coding	Rmi2	ENSMUST00000181721	nonsense_mediated_decay		16	1	10835068	1076
ENSMUSG00000042606	protein_coding	Hirip3	ENSMUST00000037248	protein_coding	principal1	7	1	126861972	2766
ENSMUSG00000017734	protein_coding	Dbndd2	ENSMUST00000069385	protein_coding	principal1	2	1	164486455	1658
ENSMUSG00000027363	protein_coding	Usp8	ENSMUST00000110416	protein_coding	alternative2	2	1	126707360	4154
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000176297	retained_intron		7	-1	37773562	439
ENSMUSG00000042606	protein_coding	Hirip3	ENSMUST00000205512	retained_intron		7	1	126862439	966
ENSMUSG00000043456	protein_coding	Zfp536	ENSMUST00000206332	retained_intron		7	-1	37773583	1203
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000198923	protein_coding		2	-1	24884418	764
ENSMUSG00000074846	processed_pseudogene	Gm10774	ENSMUST00000188689	processed_pseudogene		2	-1	126709557	204
ENSMUSG00000086836	antisense	Gm13748	ENSMUST00000149820	antisense		1	1	64078654	378
ENSMUSG00000095369	processed_transcript	Gm21859	ENSMUST00000178424	processed_transcript		16	-1	10914797	1045
ENSMUSG00000095369	processed_transcript	Gm21859	ENSMUST00000233047	processed_transcript		16	-1	10937306	921
ENSMUSG00000005686	protein_coding	Ampd3	ENSMUST00000005829	protein_coding	principal2	7	1	110772604	4094
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000152161	protein_coding		2	-1	24919607	1121
ENSMUSG00000017734	protein_coding	Dbndd2	ENSMUST00000143690	protein_coding		2	1	164486481	651
ENSMUSG00000042606	protein_coding	Hirip3	ENSMUST00000150942	retained_intron		7	1	126862464	937
ENSMUSG00000108790	TEC	Gm44806	ENSMUST00000205574	TEC		7	-1	37467422	2303
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000055022	protein_coding	principal1	6	1	88902251	1820
ENSMUSG00000034579	protein_coding	Pla2g3	ENSMUST00000064265	protein_coding	principal1	11	1	3488284	2566
ENSMUSG00000042606	protein_coding	Hirip3	ENSMUST00000129746	processed_transcript		7	1	126862467	811
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000150379	protein_coding		2	-1	24919598	884
ENSMUSG00000005686	protein_coding	Ampd3	ENSMUST00000106686	retained_intron		7	1	110772788	1769
ENSMUSG00000042606	protein_coding	Hirip3	ENSMUST00000132808	protein_coding		7	1	126862481	612
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000138415	processed_transcript		6	1	88902299	357
ENSMUSG00000042606	protein_coding	Hirip3	ENSMUST00000138793	retained_intron		7	1	126863843	617
ENSMUSG00000034579	protein_coding	Pla2g3	ENSMUST00000044682	nonsense_mediated_decay		11	1	3488299	2608
ENSMUSG00000117505	antisense	Gm9993	ENSMUST00000234126	antisense		18	-1	7869113	1096
ENSMUSG00000042606	protein_coding	Hirip3	ENSMUST00000146120	retained_intron		7	1	126864416	431
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000204584	retained_intron		6	1	88902317	363
ENSMUSG00000036893	protein_coding	Ehmt1	ENSMUST00000114418	protein_coding	alternative2	2	-1	24891703	4902
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000141163	processed_transcript		6	1	88902317	368
ENSMUSG00000005686	protein_coding	Ampd3	ENSMUST00000143786	protein_coding		7	1	110773672	725
ENSMUSG00000034579	protein_coding	Pla2g3	ENSMUST00000151860	retained_intron		11	1	3488990	2869
ENSMUSG00000017734	protein_coding	Dbndd2	ENSMUST00000109349	protein_coding	principal1	2	1	164486877	3597
ENSMUSG00000102875	TEC	Gm37139	ENSMUST00000192134	TEC		2	-1	24893866	4419
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000204765	protein_coding	principal1	6	1	88902333	1738
ENSMUSG00000022542	protein_coding	Septin12	ENSMUST00000170323	protein_coding		16	-1	4997852	2576
ENSMUSG00000103162	TEC	Gm38147	ENSMUST00000192397	TEC		2	-1	24876329	1798
ENSMUSG00000005686	protein_coding	Ampd3	ENSMUST00000147587	protein_coding		7	1	110774244	408
ENSMUSG00000024512	protein_coding	Dynap	ENSMUST00000025390	protein_coding	principal1	18	-1	70244582	1225
ENSMUSG00000005686	protein_coding	Ampd3	ENSMUST00000148292	protein_coding		7	1	110777690	667
ENSMUSG00000104591	TEC	Gm43145	ENSMUST00000198963	TEC		5	1	97046181	628
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000135778	processed_transcript		6	1	88902337	578
ENSMUSG00000017734	protein_coding	Dbndd2	ENSMUST00000017878	protein_coding	principal1	2	1	164487821	1338
ENSMUSG00000110062	TEC	B430319F04Rik	ENSMUST00000209731	TEC		7	-1	110769345	2669
ENSMUSG00000022542	protein_coding	Septin12	ENSMUST00000230362	protein_coding	principal1	16	-1	4997790	1295
ENSMUSG00000114299	protein_coding	Gm47791	ENSMUST00000223838	protein_coding	principal1	1	-1	82771243	420
ENSMUSG00000045503	protein_coding	Sys1	ENSMUST00000142347	processed_transcript		2	1	164456964	240
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000153874	protein_coding		6	1	88902342	1152
ENSMUSG00000066682	protein_coding	Pilrb2	ENSMUST00000196162	protein_coding	alternative2	5	-1	137871707	969
ENSMUSG00000022542	protein_coding	Septin12	ENSMUST00000229321	protein_coding		16	-1	4997789	1227
ENSMUSG00000025176	protein_coding	Hoga1	ENSMUST00000081714	protein_coding	principal1	19	1	42045832	1668
ENSMUSG00000035592	protein_coding	Krt33a	ENSMUST00000018399	protein_coding	principal1	11	-1	100016212	1683
ENSMUSG00000022542	protein_coding	Septin12	ENSMUST00000230878	retained_intron		16	-1	4997763	1239
ENSMUSG00000041144	protein_coding	Dnah7b	ENSMUST00000238212	protein_coding	alternative2	1	1	46066853	12319
ENSMUSG00000101618	processed_pseudogene	Gm18443	ENSMUST00000185358	processed_pseudogene		1	-1	25997159	556
ENSMUSG00000025176	protein_coding	Hoga1	ENSMUST00000167381	retained_intron		19	1	42045851	567
ENSMUSG00000041144	protein_coding	Dnah7b	ENSMUST00000190792	retained_intron		1	1	46144697	3465
ENSMUSG00000099458	processed_pseudogene	Gm19123	ENSMUST00000190716	processed_pseudogene		1	1	26466236	651
ENSMUSG00000035592	protein_coding	Krt33a	ENSMUST00000138756	processed_transcript		11	-1	100013987	641
ENSMUSG00000066682	protein_coding	Pilrb2	ENSMUST00000164886	protein_coding	principal2	5	-1	137871758	1807
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000203694	nonsense_mediated_decay		6	1	88902352	742
ENSMUSG00000090369	protein_coding	4933411K16Rik	ENSMUST00000164518	protein_coding	principal1	19	1	42052248	1380
ENSMUSG00000041144	protein_coding	Dnah7b	ENSMUST00000187548	retained_intron		1	1	46235248	5370
ENSMUSG00000021508	protein_coding	Cxcl14	ENSMUST00000224801	protein_coding		13	-1	56296305	1467
ENSMUSG00000066682	protein_coding	Pilrb2	ENSMUST00000199773	protein_coding		5	-1	137871815	369
ENSMUSG00000041144	protein_coding	Dnah7b	ENSMUST00000185557	processed_transcript		1	1	46321621	532
ENSMUSG00000052301	protein_coding	Doc2a	ENSMUST00000141805	protein_coding		7	1	126847416	677
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000203345	protein_coding		6	1	88902453	3359
ENSMUSG00000073722	protein_coding	4931408C20Rik	ENSMUST00000097801	protein_coding	principal1	1	-1	26687460	4318
ENSMUSG00000106155	antisense	Gm43495	ENSMUST00000200060	antisense		5	1	137870754	205
ENSMUSG00000023572	protein_coding	Ccndbp1	ENSMUST00000060455	protein_coding	principal2	2	1	121008403	1569
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000144405	processed_transcript		6	1	88905634	427
ENSMUSG00000041144	protein_coding	Dnah7b	ENSMUST00000185879	nonsense_mediated_decay		1	1	46356620	740
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000203185	protein_coding	principal1	6	1	88905946	1718
ENSMUSG00000110164	processed_pseudogene	Gm7351	ENSMUST00000210745	processed_pseudogene		8	-1	55974219	580
ENSMUSG00000023572	protein_coding	Ccndbp1	ENSMUST00000099489	protein_coding	alternative2	2	1	121008448	1632
ENSMUSG00000039963	protein_coding	Ccdc40	ENSMUST00000236813	protein_coding	principal5	11	1	119228598	4769
ENSMUSG00000041144	protein_coding	Dnah7b	ENSMUST00000069293	protein_coding	principal2	1	1	46066738	12318
ENSMUSG00000025959	protein_coding	Klf7	ENSMUST00000114086	protein_coding	principal1	1	-1	64121491	7662
ENSMUSG00000021508	protein_coding	Cxcl14	ENSMUST00000021970	protein_coding	principal1	13	-1	56296551	1827
ENSMUSG00000094112	protein_coding	9330182O14Rik	ENSMUST00000228780	protein_coding	principal1	15	1	40134365	2053
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000151379	processed_transcript		6	1	88905955	315
ENSMUSG00000023572	protein_coding	Ccndbp1	ENSMUST00000099488	protein_coding	alternative2	2	1	121008432	1595
ENSMUSG00000094112	protein_coding	9330182O14Rik	ENSMUST00000179120	protein_coding	principal1	15	1	40142188	423
ENSMUSG00000038257	protein_coding	Glra3	ENSMUST00000164020	processed_transcript		8	1	55940460	3586
ENSMUSG00000117957	lincRNA	Gm50334	ENSMUST00000238052	lincRNA		19	1	44313772	1175
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000203648	nonsense_mediated_decay		6	1	88905957	945
ENSMUSG00000118497	protein_coding	AC124764.1	ENSMUST00000239144	protein_coding	principal1	18	-1	70276300	1047
ENSMUSG00000082954	processed_pseudogene	Gm15504	ENSMUST00000119674	processed_pseudogene		7	-1	80237944	265
ENSMUSG00000023572	protein_coding	Ccndbp1	ENSMUST00000151532	retained_intron		2	1	121008704	905
ENSMUSG00000033610	protein_coding	Pank1	ENSMUST00000036584	protein_coding		19	-1	34879455	7414
ENSMUSG00000110495	unitary_pseudogene	Gm45879	ENSMUST00000212521	unitary_pseudogene		18	-1	70433856	392
ENSMUSG00000029111	protein_coding	Nelfa	ENSMUST00000030993	protein_coding	principal1	5	-1	33936413	2580
ENSMUSG00000114911	processed_pseudogene	Gm17878	ENSMUST00000224089	processed_pseudogene		13	-1	56320334	1025
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000128790	nonsense_mediated_decay		6	1	88905975	987
ENSMUSG00000025959	protein_coding	Klf7	ENSMUST00000055001	protein_coding		1	-1	64121482	1477
ENSMUSG00000039963	protein_coding	Ccdc40	ENSMUST00000053440	protein_coding	alternative2	11	1	119229129	3524
ENSMUSG00000041629	protein_coding	Fam104a	ENSMUST00000120194	protein_coding	principal1	11	-1	113684155	2619
ENSMUSG00000025959	protein_coding	Klf7	ENSMUST00000135075	protein_coding		1	-1	64122282	553
ENSMUSG00000039963	protein_coding	Ccdc40	ENSMUST00000143066	retained_intron		11	1	119238718	824
ENSMUSG00000029111	protein_coding	Nelfa	ENSMUST00000132942	retained_intron		5	-1	33936250	1926
ENSMUSG00000023572	protein_coding	Ccndbp1	ENSMUST00000140468	processed_transcript		2	1	121008467	891
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000152585	nonsense_mediated_decay		6	1	88906041	749
ENSMUSG00000039963	protein_coding	Ccdc40	ENSMUST00000133788	retained_intron		11	1	119253553	799
ENSMUSG00000023572	protein_coding	Ccndbp1	ENSMUST00000135036	retained_intron		2	1	121011055	550
ENSMUSG00000106812	lincRNA	Gm28563	ENSMUST00000201179	lincRNA		5	-1	118397330	211
ENSMUSG00000021534	protein_coding	1700001L19Rik	ENSMUST00000022007	protein_coding	principal1	13	1	68597421	1826
ENSMUSG00000033610	protein_coding	Pank1	ENSMUST00000112460	protein_coding	principal1	19	-1	34877917	2760
ENSMUSG00000039963	protein_coding	Ccdc40	ENSMUST00000126652	processed_transcript		11	1	119258927	1662
ENSMUSG00000023572	protein_coding	Ccndbp1	ENSMUST00000129717	processed_transcript		2	1	121012491	370
ENSMUSG00000039963	protein_coding	Ccdc40	ENSMUST00000155683	retained_intron		11	1	119259766	324
ENSMUSG00000033610	protein_coding	Pank1	ENSMUST00000238065	protein_coding		19	-1	34877853	2342
ENSMUSG00000082365	transcribed_processed_pseudogene	Gm15754	ENSMUST00000202846	processed_transcript		5	1	118486967	758
ENSMUSG00000033610	protein_coding	Pank1	ENSMUST00000237577	retained_intron		19	-1	34877849	1138
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000150236	protein_coding		6	1	88907975	965
ENSMUSG00000082365	transcribed_processed_pseudogene	Gm15754	ENSMUST00000119191	transcribed_processed_pseudogene		5	1	118502840	478
ENSMUSG00000023572	protein_coding	Ccndbp1	ENSMUST00000171260	protein_coding	alternative2	2	1	121008472	1187
ENSMUSG00000050973	protein_coding	Gdpgp1	ENSMUST00000062915	protein_coding	principal1	7	1	80232865	4189
ENSMUSG00000039963	protein_coding	Ccdc40	ENSMUST00000125724	retained_intron		11	1	119262872	403
ENSMUSG00000021534	protein_coding	1700001L19Rik	ENSMUST00000222604	protein_coding	principal1	13	1	68597439	780
ENSMUSG00000102958	TEC	Gm37016	ENSMUST00000195507	TEC		16	1	91262498	660
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000129979	nonsense_mediated_decay		6	1	88907975	1322
ENSMUSG00000100310	processed_pseudogene	Gm19641	ENSMUST00000188432	processed_pseudogene		1	-1	27336768	417
ENSMUSG00000106381	IG_V_pseudogene	Igkv2-95-1	ENSMUST00000200279	IG_V_pseudogene		6	1	68671162	272
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000123257	nonsense_mediated_decay		6	1	88907989	766
ENSMUSG00000052363	protein_coding	Zdhhc19	ENSMUST00000064192	protein_coding	principal2	16	1	32496265	1323
ENSMUSG00000094902	IG_V_gene	Igkv10-95	ENSMUST00000198735	IG_V_gene		6	1	68680379	347
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000128171	processed_transcript		6	1	88908188	263
ENSMUSG00000050195	protein_coding	Scd4	ENSMUST00000058856	protein_coding	principal1	19	1	44333092	3306
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000153885	retained_intron		6	1	88908188	383
ENSMUSG00000110652	antisense	Gm33023	ENSMUST00000212450	antisense		8	1	104630832	1571
ENSMUSG00000052363	protein_coding	Zdhhc19	ENSMUST00000231293	processed_transcript		16	1	32496276	1098
ENSMUSG00000027122	protein_coding	Arl14ep	ENSMUST00000028536	protein_coding	principal1	2	-1	106974424	3337
ENSMUSG00000110652	antisense	Gm33023	ENSMUST00000212328	antisense		8	1	104631438	681
ENSMUSG00000052363	protein_coding	Zdhhc19	ENSMUST00000232434	retained_intron		16	1	32496276	1067
ENSMUSG00000052363	protein_coding	Zdhhc19	ENSMUST00000231510	protein_coding	alternative2	16	1	32496300	1181
ENSMUSG00000046160	protein_coding	Olig1	ENSMUST00000056882	protein_coding	principal1	16	1	91269772	2162
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000148874	retained_intron		6	1	88910158	713
ENSMUSG00000094902	IG_V_gene	Igkv10-95	ENSMUST00000103329	IG_V_gene	principal1	6	1	68680562	287
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000152045	retained_intron		6	1	88910223	276
ENSMUSG00000050195	protein_coding	Scd4	ENSMUST00000133314	retained_intron		19	1	44333092	1154
ENSMUSG00000002871	protein_coding	Tpra1	ENSMUST00000203155	retained_intron		6	1	88910599	352
ENSMUSG00000052363	protein_coding	Zdhhc19	ENSMUST00000160832	processed_transcript		16	1	32499611	631
ENSMUSG00000085865	lincRNA	Gm15966	ENSMUST00000232580	lincRNA		16	-1	91328997	415
ENSMUSG00000085865	lincRNA	Gm15966	ENSMUST00000232074	lincRNA		16	-1	91328997	504
ENSMUSG00000116957	lincRNA	Gm34680	ENSMUST00000231549	lincRNA		16	1	32550211	1207
ENSMUSG00000096490	IG_V_gene	Igkv10-94	ENSMUST00000103330	IG_V_gene	principal1	6	-1	68704978	347
ENSMUSG00000116957	lincRNA	Gm34680	ENSMUST00000232103	lincRNA		16	1	32551742	1135
ENSMUSG00000085865	lincRNA	Gm15966	ENSMUST00000231371	lincRNA		16	-1	91329005	503
ENSMUSG00000085865	lincRNA	Gm15966	ENSMUST00000231271	lincRNA		16	-1	91329043	523
ENSMUSG00000085865	lincRNA	Gm15966	ENSMUST00000231982	lincRNA		16	-1	91329043	435
ENSMUSG00000027122	protein_coding	Arl14ep	ENSMUST00000093883	protein_coding	principal1	2	-1	106970391	1363
ENSMUSG00000099771	processed_pseudogene	Gm19257	ENSMUST00000186121	processed_pseudogene		1	-1	82777210	183
ENSMUSG00000085865	lincRNA	Gm15966	ENSMUST00000232206	lincRNA		16	-1	91329005	928
ENSMUSG00000085865	lincRNA	Gm15966	ENSMUST00000231983	lincRNA		16	-1	91328986	1074
ENSMUSG00000038257	protein_coding	Glra3	ENSMUST00000000275	protein_coding	principal1	8	1	55940509	6508
ENSMUSG00000111366	lincRNA	Gm47156	ENSMUST00000213334	lincRNA		10	1	93618862	953
ENSMUSG00000074885	lincRNA	Gm10782	ENSMUST00000223775	lincRNA		13	1	56362900	1480
ENSMUSG00000074885	lincRNA	Gm10782	ENSMUST00000099476	lincRNA		13	1	56362901	429
ENSMUSG00000040952	protein_coding	Rps19	ENSMUST00000108430	protein_coding	principal1	7	1	24884371	774
ENSMUSG00000085865	lincRNA	Gm15966	ENSMUST00000136853	lincRNA		16	-1	91328995	480
ENSMUSG00000102280	TEC	Gm36999	ENSMUST00000192756	TEC		1	-1	82807468	1046
ENSMUSG00000085865	lincRNA	Gm15966	ENSMUST00000146994	lincRNA		16	-1	91325740	204
ENSMUSG00000038257	protein_coding	Glra3	ENSMUST00000239388	protein_coding		8	1	55940825	1474
ENSMUSG00000022603	protein_coding	Mroh4	ENSMUST00000137963	protein_coding	alternative2	15	-1	74634849	3104
ENSMUSG00000027122	protein_coding	Arl14ep	ENSMUST00000124598	retained_intron		2	-1	106974397	2277
ENSMUSG00000052301	protein_coding	Doc2a	ENSMUST00000064110	protein_coding	principal1	7	1	126847553	2538
ENSMUSG00000100170	lincRNA	Gm28942	ENSMUST00000186334	lincRNA		1	1	82819835	365
ENSMUSG00000109662	processed_pseudogene	Gm45366	ENSMUST00000209828	processed_pseudogene		8	-1	56017100	384
ENSMUSG00000100744	processed_pseudogene	Gm17764	ENSMUST00000185925	processed_pseudogene		1	-1	82822861	391
ENSMUSG00000110477	protein_coding	Gm3045	ENSMUST00000212844	protein_coding	principal1	13	1	56426594	1825
ENSMUSG00000083903	processed_pseudogene	Gm5405	ENSMUST00000120478	processed_pseudogene		16	-1	32591909	609
ENSMUSG00000027122	protein_coding	Arl14ep	ENSMUST00000146961	retained_intron		2	-1	106969277	790
ENSMUSG00000052301	protein_coding	Doc2a	ENSMUST00000152406	processed_transcript		7	1	126847638	376
ENSMUSG00000052301	protein_coding	Doc2a	ENSMUST00000205938	protein_coding		7	1	126847698	251
ENSMUSG00000052301	protein_coding	Doc2a	ENSMUST00000152051	protein_coding		7	1	126847726	836
ENSMUSG00000045503	protein_coding	Sys1	ENSMUST00000109352	protein_coding	principal1	2	1	164456976	2001
ENSMUSG00000048982	protein_coding	Gphb5	ENSMUST00000051079	protein_coding	principal1	12	-1	75416781	1612
ENSMUSG00000040952	protein_coding	Rps19	ENSMUST00000129847	nonsense_mediated_decay		7	1	24884633	593
ENSMUSG00000052301	protein_coding	Doc2a	ENSMUST00000147257	protein_coding		7	1	126847927	436
ENSMUSG00000034663	protein_coding	Bmp2k	ENSMUST00000112974	protein_coding		5	1	96997689	3244
ENSMUSG00000040952	protein_coding	Rps19	ENSMUST00000138662	retained_intron		7	1	24884635	2657
ENSMUSG00000045503	protein_coding	Sys1	ENSMUST00000155250	processed_transcript		2	1	164457088	538
ENSMUSG00000052301	protein_coding	Doc2a	ENSMUST00000139174	protein_coding		7	1	126847962	469
ENSMUSG00000040952	protein_coding	Rps19	ENSMUST00000108428	protein_coding		7	1	24884636	1284
ENSMUSG00000031880	protein_coding	Rrad	ENSMUST00000034351	protein_coding	principal1	8	-1	104631327	1577
ENSMUSG00000052301	protein_coding	Doc2a	ENSMUST00000137873	protein_coding		7	1	126848255	862
ENSMUSG00000040952	protein_coding	Rps19	ENSMUST00000153451	protein_coding		7	1	24884651	604
ENSMUSG00000052301	protein_coding	Doc2a	ENSMUST00000176771	nonsense_mediated_decay		7	1	126848797	936
ENSMUSG00000031880	protein_coding	Rrad	ENSMUST00000212163	protein_coding		8	-1	104631240	435
ENSMUSG00000034663	protein_coding	Bmp2k	ENSMUST00000035635	protein_coding	principal1	5	1	96997689	7387
ENSMUSG00000040952	protein_coding	Rps19	ENSMUST00000108429	protein_coding	principal1	7	1	24884714	633
ENSMUSG00000051373	protein_coding	Plpp7	ENSMUST00000057423	protein_coding	principal1	2	1	32095528	1947
ENSMUSG00000022603	protein_coding	Mroh4	ENSMUST00000023271	protein_coding	principal2	15	-1	74636353	3583
ENSMUSG00000045503	protein_coding	Sys1	ENSMUST00000138268	nonsense_mediated_decay		2	1	164461000	1618
ENSMUSG00000040952	protein_coding	Rps19	ENSMUST00000156372	protein_coding		7	1	24884813	417
ENSMUSG00000090326	protein_coding	Dthd1	ENSMUST00000238474	protein_coding	alternative2	5	1	62811674	2877
ENSMUSG00000051373	protein_coding	Plpp7	ENSMUST00000140762	protein_coding		2	1	32095565	634
ENSMUSG00000040952	protein_coding	Rps19	ENSMUST00000124035	protein_coding		7	1	24884917	641
ENSMUSG00000090326	protein_coding	Dthd1	ENSMUST00000170704	protein_coding	principal2	5	1	62813823	2427
ENSMUSG00000097847	antisense	4930478K11Rik	ENSMUST00000181875	antisense		12	-1	108328030	715
ENSMUSG00000051373	protein_coding	Plpp7	ENSMUST00000146502	protein_coding		2	1	32096155	1439
ENSMUSG00000022603	protein_coding	Mroh4	ENSMUST00000176592	processed_transcript		15	-1	74612012	799
ENSMUSG00000033721	protein_coding	Vav3	ENSMUST00000046864	protein_coding	principal1	3	1	109340653	5019
ENSMUSG00000045503	protein_coding	Sys1	ENSMUST00000142892	nonsense_mediated_decay		2	1	164461053	641
ENSMUSG00000025857	protein_coding	Dnaaf5	ENSMUST00000026975	protein_coding	principal1	5	1	139150223	3450
ENSMUSG00000040952	protein_coding	Rps19	ENSMUST00000130335	retained_intron		7	1	24888190	395
ENSMUSG00000110300	processed_pseudogene	Gm18645	ENSMUST00000209593	processed_pseudogene		8	1	63522920	651
ENSMUSG00000040952	protein_coding	Rps19	ENSMUST00000146004	processed_transcript		7	1	24888740	286
ENSMUSG00000045503	protein_coding	Sys1	ENSMUST00000125086	nonsense_mediated_decay		2	1	164461309	4271
ENSMUSG00000110678	processed_pseudogene	Gm18645	ENSMUST00000212222	processed_pseudogene		8	1	63522922	760
ENSMUSG00000022603	protein_coding	Mroh4	ENSMUST00000177179	retained_intron		15	-1	74608228	475
ENSMUSG00000025857	protein_coding	Dnaaf5	ENSMUST00000196441	protein_coding		5	1	139150229	2426
ENSMUSG00000074461	TEC	Gm10699	ENSMUST00000098916	TEC		8	1	14090461	2130
ENSMUSG00000022603	protein_coding	Mroh4	ENSMUST00000176767	protein_coding	alternative2	15	-1	74628323	1154
ENSMUSG00000045503	protein_coding	Sys1	ENSMUST00000072452	protein_coding	principal1	2	1	164460971	1606
ENSMUSG00000025857	protein_coding	Dnaaf5	ENSMUST00000127542	processed_transcript		5	1	139167120	470
ENSMUSG00000022603	protein_coding	Mroh4	ENSMUST00000175931	processed_transcript		15	-1	74636298	561
ENSMUSG00000101590	unprocessed_pseudogene	Gm29104	ENSMUST00000186304	unprocessed_pseudogene		1	1	118064118	222
ENSMUSG00000090996	protein_coding	Gm20458	ENSMUST00000164863	nonsense_mediated_decay	principal1	2	1	164460967	1369
ENSMUSG00000090061	protein_coding	Nwd2	ENSMUST00000160066	retained_intron		5	1	63649102	3369
ENSMUSG00000086867	antisense	Gm4577	ENSMUST00000135203	antisense		17	1	35703896	716
ENSMUSG00000102030	protein_coding	Gm29106	ENSMUST00000186264	protein_coding	principal1	1	1	118176542	4012
ENSMUSG00000033721	protein_coding	Vav3	ENSMUST00000126179	retained_intron		3	1	109340683	2398
ENSMUSG00000099870	processed_pseudogene	Gm7200	ENSMUST00000188426	processed_pseudogene		1	1	118249863	1163
ENSMUSG00000033721	protein_coding	Vav3	ENSMUST00000137871	processed_transcript		3	1	109341106	465
ENSMUSG00000033721	protein_coding	Vav3	ENSMUST00000128033	processed_transcript		3	1	109494784	515
ENSMUSG00000030158	protein_coding	Clec12b	ENSMUST00000032261	protein_coding	principal1	6	-1	129385503	1521
ENSMUSG00000037071	protein_coding	Scd1	ENSMUST00000041331	protein_coding	principal1	19	-1	44407709	4832
ENSMUSG00000033721	protein_coding	Vav3	ENSMUST00000106576	protein_coding		3	1	109573907	3123
ENSMUSG00000105595	processed_pseudogene	Gm49316	ENSMUST00000197855	processed_pseudogene		3	-1	133579901	275
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000166426	protein_coding	alternative2	17	1	35135178	3787
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000112951	protein_coding	principal1	9	-1	96889413	3118
ENSMUSG00000037071	protein_coding	Scd1	ENSMUST00000236824	processed_transcript		19	-1	44406690	750
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000172571	protein_coding		17	1	35135205	3599
ENSMUSG00000033721	protein_coding	Vav3	ENSMUST00000148866	processed_transcript		3	1	109647524	579
ENSMUSG00000037071	protein_coding	Scd1	ENSMUST00000235741	protein_coding		19	-1	44407879	329
ENSMUSG00000030158	protein_coding	Clec12b	ENSMUST00000112082	protein_coding	principal1	6	-1	129385874	1335
ENSMUSG00000021260	protein_coding	Hhipl1	ENSMUST00000021685	protein_coding	principal1	12	1	108306270	5174
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000078478	protein_coding	principal1	9	-1	96889429	2908
ENSMUSG00000034570	protein_coding	Inpp5j	ENSMUST00000044507	protein_coding	principal1	11	-1	3504821	3370
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000093049	protein_coding		8	1	123442986	1909
ENSMUSG00000086721	processed_pseudogene	Gm13750	ENSMUST00000117621	processed_pseudogene		1	1	64150201	465
ENSMUSG00000090061	protein_coding	Nwd2	ENSMUST00000159584	protein_coding	principal1	5	1	63649108	8534
ENSMUSG00000021260	protein_coding	Hhipl1	ENSMUST00000223395	processed_transcript		12	1	108306548	2038
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000120101	protein_coding	principal1	9	-1	96889474	3189
ENSMUSG00000034570	protein_coding	Inpp5j	ENSMUST00000148939	protein_coding		11	-1	3502134	2271
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000205619	protein_coding		7	-1	126861271	571
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000119141	protein_coding	principal1	9	-1	96889433	2768
ENSMUSG00000090061	protein_coding	Nwd2	ENSMUST00000162166	nonsense_mediated_decay		5	1	63649333	2281
ENSMUSG00000073686	antisense	Gm10564	ENSMUST00000097750	antisense		4	1	155042046	3113
ENSMUSG00000090061	protein_coding	Nwd2	ENSMUST00000162757	protein_coding		5	1	63800462	1230
ENSMUSG00000090138	processed_pseudogene	Gm3687	ENSMUST00000161710	processed_pseudogene		5	1	63694054	460
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000050833	protein_coding		7	-1	126861463	1944
ENSMUSG00000104868	TEC	Gm9954	ENSMUST00000198686	TEC		5	-1	63650894	4725
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000126411	protein_coding		9	-1	96889428	996
ENSMUSG00000104868	TEC	Gm9954	ENSMUST00000067917	TEC		5	-1	63650264	315
ENSMUSG00000062778	protein_coding	Chia1	ENSMUST00000079132	protein_coding	principal1	3	1	106113229	1681
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000121077	protein_coding		9	-1	96862903	731
ENSMUSG00000038026	protein_coding	Kcnj9	ENSMUST00000062387	protein_coding	principal1	1	-1	172329318	3857
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000173491	protein_coding		17	1	35135228	886
ENSMUSG00000034570	protein_coding	Inpp5j	ENSMUST00000110018	nonsense_mediated_decay		11	-1	3504771	2384
ENSMUSG00000038026	protein_coding	Kcnj9	ENSMUST00000194204	protein_coding	principal1	1	-1	172329282	2265
ENSMUSG00000021771	protein_coding	Vdac2	ENSMUST00000224373	protein_coding		14	1	21825238	874
ENSMUSG00000062778	protein_coding	Chia1	ENSMUST00000139086	protein_coding		3	1	106113390	867
ENSMUSG00000049670	protein_coding	Morn4	ENSMUST00000237567	retained_intron		19	-1	42079133	2192
ENSMUSG00000034570	protein_coding	Inpp5j	ENSMUST00000154756	non_stop_decay		11	-1	3504774	2724
ENSMUSG00000037202	protein_coding	Prf1	ENSMUST00000219375	protein_coding	principal1	10	1	61297833	2474
ENSMUSG00000034570	protein_coding	Inpp5j	ENSMUST00000110019	nonsense_mediated_decay		11	-1	3504786	2091
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000135834	processed_transcript		9	-1	96854924	709
ENSMUSG00000062778	protein_coding	Chia1	ENSMUST00000143128	retained_intron		3	1	106122454	476
ENSMUSG00000038026	protein_coding	Kcnj9	ENSMUST00000194860	retained_intron		1	-1	172328108	1390
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000154146	protein_coding		9	-1	96892669	372
ENSMUSG00000055725	protein_coding	Paqr3	ENSMUST00000069453	protein_coding	principal1	5	-1	97111596	1375
ENSMUSG00000106382	TR_V_pseudogene	Trav4-1	ENSMUST00000199078	TR_V_pseudogene		14	1	52607307	330
ENSMUSG00000024927	protein_coding	Rela	ENSMUST00000025867	protein_coding	principal1	19	1	5637483	2716
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000137770	retained_intron		9	-1	96889420	427
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000124923	protein_coding		9	-1	96862980	393
ENSMUSG00000034570	protein_coding	Inpp5j	ENSMUST00000183684	nonsense_mediated_decay		11	-1	3504799	3433
ENSMUSG00000037202	protein_coding	Prf1	ENSMUST00000035419	protein_coding	principal1	10	1	61299801	1968
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000141127	processed_transcript		9	-1	96862982	395
ENSMUSG00000076761	TR_V_gene	Trav5-1	ENSMUST00000103570	TR_V_gene	principal1	14	1	52622566	343
ENSMUSG00000102413	antisense	Gm36937	ENSMUST00000192957	antisense		1	1	172322994	429
ENSMUSG00000024927	protein_coding	Rela	ENSMUST00000238000	nonsense_mediated_decay		19	1	5637719	2063
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000136987	processed_transcript		9	-1	96892090	393
ENSMUSG00000044730	protein_coding	9930104L06Rik	ENSMUST00000233207	processed_transcript		4	1	124937048	394
ENSMUSG00000043587	protein_coding	Pxylp1	ENSMUST00000185561	retained_intron		9	-1	96889433	1803
ENSMUSG00000044730	protein_coding	9930104L06Rik	ENSMUST00000233530	retained_intron		4	1	124937058	1203
ENSMUSG00000062933	processed_pseudogene	Gm10123	ENSMUST00000075723	processed_pseudogene		9	1	96895658	490
ENSMUSG00000101209	processed_pseudogene	Gm8524	ENSMUST00000186232	processed_pseudogene		9	1	96905507	379
ENSMUSG00000069833	protein_coding	Ahnak	ENSMUST00000092956	protein_coding		19	1	8989284	18100
ENSMUSG00000055725	protein_coding	Paqr3	ENSMUST00000112969	protein_coding	principal1	5	-1	97111573	2257
ENSMUSG00000076762	TR_V_gene	Trav6-1	ENSMUST00000103571	TR_V_gene	principal1	14	1	52638515	338
ENSMUSG00000044730	protein_coding	9930104L06Rik	ENSMUST00000233289	processed_transcript		4	1	124937062	832
ENSMUSG00000024927	protein_coding	Rela	ENSMUST00000237838	nonsense_mediated_decay		19	1	5637829	1571
ENSMUSG00000044730	protein_coding	9930104L06Rik	ENSMUST00000233434	retained_intron		4	1	124937065	4749
ENSMUSG00000105159	processed_pseudogene	Gm42988	ENSMUST00000198116	processed_pseudogene		14	1	52639531	225
ENSMUSG00000109785	antisense	Gm45542	ENSMUST00000210456	antisense		8	1	45410063	438
ENSMUSG00000024927	protein_coding	Rela	ENSMUST00000236300	processed_transcript		19	1	5637933	311
ENSMUSG00000055725	protein_coding	Paqr3	ENSMUST00000126585	retained_intron		5	-1	97097771	422
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000173535	protein_coding		17	1	35135486	1722
ENSMUSG00000104620	TR_V_gene	Trav7-1	ENSMUST00000198019	TR_V_gene	principal1	14	1	52654817	337
ENSMUSG00000085541	antisense	Gm16010	ENSMUST00000145410	antisense		9	1	97015966	4427
ENSMUSG00000055725	protein_coding	Paqr3	ENSMUST00000196078	protein_coding		5	-1	97111443	685
ENSMUSG00000024927	protein_coding	Rela	ENSMUST00000238126	processed_transcript		19	1	5637944	728
ENSMUSG00000069833	protein_coding	Ahnak	ENSMUST00000237912	nonsense_mediated_decay		19	1	8989284	1188
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000173952	protein_coding		17	1	35135510	770
ENSMUSG00000024927	protein_coding	Rela	ENSMUST00000237863	protein_coding		19	1	5637959	363
ENSMUSG00000055725	protein_coding	Paqr3	ENSMUST00000112968	protein_coding		5	-1	97111596	1875
ENSMUSG00000085541	antisense	Gm16010	ENSMUST00000124366	antisense		9	1	97017474	746
ENSMUSG00000049670	protein_coding	Morn4	ENSMUST00000051772	protein_coding	principal1	19	-1	42086357	1800
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000106342	protein_coding		7	-1	126861686	1840
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000065534	protein_coding	principal1	8	1	123442986	3127
ENSMUSG00000024927	protein_coding	Rela	ENSMUST00000237361	retained_intron		19	1	5641146	786
ENSMUSG00000055725	protein_coding	Paqr3	ENSMUST00000132127	retained_intron		5	-1	97111584	4075
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000174478	protein_coding		17	1	35135718	756
ENSMUSG00000069833	protein_coding	Ahnak	ENSMUST00000092955	protein_coding	principal1	19	1	8989295	830
ENSMUSG00000112818	lincRNA	Gm35920	ENSMUST00000218522	lincRNA		10	1	77457917	594
ENSMUSG00000101857	unprocessed_pseudogene	Gm21757	ENSMUST00000191075	unprocessed_pseudogene		Y	-1	72450478	696
ENSMUSG00000069833	protein_coding	Ahnak	ENSMUST00000236390	protein_coding		19	1	8997898	2200
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000174281	protein_coding		17	1	35135730	3611
ENSMUSG00000044730	protein_coding	9930104L06Rik	ENSMUST00000094769	protein_coding	principal1	4	1	124937074	2911
ENSMUSG00000069833	protein_coding	Ahnak	ENSMUST00000237033	processed_transcript		19	1	8999660	989
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000001522	protein_coding		8	1	123442986	3214
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000173550	protein_coding		17	1	35135744	3536
ENSMUSG00000046997	protein_coding	Spsb4	ENSMUST00000055433	protein_coding	principal1	9	-1	97018843	2720
ENSMUSG00000021771	protein_coding	Vdac2	ENSMUST00000022293	protein_coding	principal2	14	1	21831269	1954
ENSMUSG00000044730	protein_coding	9930104L06Rik	ENSMUST00000232733	processed_transcript		4	1	124938778	553
ENSMUSG00000044730	protein_coding	9930104L06Rik	ENSMUST00000233875	processed_transcript		4	1	124943131	546
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000172889	retained_intron		17	1	35136123	611
ENSMUSG00000046997	protein_coding	Spsb4	ENSMUST00000162307	processed_transcript		9	-1	96984195	1410
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000124741	protein_coding		8	1	123442996	404
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000106343	protein_coding	principal5	7	-1	126861838	1973
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000172925	retained_intron		17	1	35138573	880
ENSMUSG00000046997	protein_coding	Spsb4	ENSMUST00000159298	processed_transcript		9	-1	96971975	781
ENSMUSG00000059361	protein_coding	Nrsn2	ENSMUST00000079278	protein_coding	principal1	2	-1	152376638	1455
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000173351	retained_intron		17	1	35140231	831
ENSMUSG00000046997	protein_coding	Spsb4	ENSMUST00000064445	retained_intron		9	-1	97018764	2944
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000108832	protein_coding		8	1	123443005	3242
ENSMUSG00000101376	processed_pseudogene	Gm18291	ENSMUST00000190791	processed_pseudogene		9	-1	97042862	301
ENSMUSG00000021771	protein_coding	Vdac2	ENSMUST00000153320	protein_coding		14	1	21831271	893
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000174797	retained_intron		17	1	35141159	622
ENSMUSG00000003970	protein_coding	Rpl8	ENSMUST00000004072	protein_coding	principal1	15	1	76904078	851
ENSMUSG00000046707	protein_coding	Csnk2a2	ENSMUST00000056919	protein_coding	principal1	8	-1	95488827	3773
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000132063	protein_coding		8	1	123443008	390
ENSMUSG00000021771	protein_coding	Vdac2	ENSMUST00000173456	protein_coding	alternative2	14	1	21831566	956
ENSMUSG00000003970	protein_coding	Rpl8	ENSMUST00000229183	protein_coding	principal1	15	1	76904102	1020
ENSMUSG00000101365	lincRNA	Gm19325	ENSMUST00000186238	lincRNA		9	-1	97067307	3382
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000174613	retained_intron		17	1	35141977	402
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000128424	protein_coding		8	1	123443012	730
ENSMUSG00000021771	protein_coding	Vdac2	ENSMUST00000152562	protein_coding		14	1	21831726	377
ENSMUSG00000019947	protein_coding	Arid5b	ENSMUST00000219238	protein_coding	principal2	10	-1	68278740	7581
ENSMUSG00000003970	protein_coding	Rpl8	ENSMUST00000229591	retained_intron		15	1	76904303	824
ENSMUSG00000021771	protein_coding	Vdac2	ENSMUST00000172727	protein_coding	alternative2	14	1	21832447	1291
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000108830	protein_coding	principal1	8	1	123443308	3191
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000172993	protein_coding		17	1	35145888	444
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000212391	protein_coding		8	1	123446939	589
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000172882	retained_intron		17	1	35146377	683
ENSMUSG00000021771	protein_coding	Vdac2	ENSMUST00000147715	processed_transcript		14	1	21833618	407
ENSMUSG00000068062	processed_transcript	Gm14164	ENSMUST00000128577	processed_transcript		2	1	152345669	1999
ENSMUSG00000001482	protein_coding	Def8	ENSMUST00000212827	protein_coding		8	1	123447182	359
ENSMUSG00000068062	processed_transcript	Gm14164	ENSMUST00000089083	processed_transcript		2	1	152374748	402
ENSMUSG00000019947	protein_coding	Arid5b	ENSMUST00000020106	nonsense_mediated_decay		10	-1	68278721	4202
ENSMUSG00000031613	protein_coding	Hpgd	ENSMUST00000034026	protein_coding	principal1	8	1	56294585	1683
ENSMUSG00000061755	protein_coding	Bod1l	ENSMUST00000050556	protein_coding	principal3	5	-1	41844315	10540
ENSMUSG00000021771	protein_coding	Vdac2	ENSMUST00000132364	retained_intron		14	1	21837734	663
ENSMUSG00000081434	processed_pseudogene	Gm14165	ENSMUST00000121456	processed_pseudogene		2	1	152353615	952
ENSMUSG00000019947	protein_coding	Arid5b	ENSMUST00000218532	protein_coding	alternative2	10	-1	68136626	3025
ENSMUSG00000046707	protein_coding	Csnk2a2	ENSMUST00000212214	protein_coding	principal1	8	-1	95488780	6779
ENSMUSG00000086986	processed_pseudogene	Gm12103	ENSMUST00000121892	processed_pseudogene		11	-1	30822670	362
ENSMUSG00000024392	protein_coding	Bag6	ENSMUST00000025250	protein_coding	principal3	17	1	35135178	3858
ENSMUSG00000021771	protein_coding	Vdac2	ENSMUST00000130224	retained_intron		14	1	21837831	595
ENSMUSG00000110397	TEC	Gm45540	ENSMUST00000209271	TEC		8	1	56311304	3606
ENSMUSG00000061755	protein_coding	Bod1l	ENSMUST00000202908	protein_coding	alternative2	5	-1	41844315	10399
ENSMUSG00000076764	TR_V_gene	Trav6-2	ENSMUST00000198058	TR_V_gene	principal5	14	1	52667411	341
ENSMUSG00000046707	protein_coding	Csnk2a2	ENSMUST00000212750	protein_coding		8	-1	95460714	2994
ENSMUSG00000019947	protein_coding	Arid5b	ENSMUST00000218425	retained_intron		10	-1	68278721	2946
ENSMUSG00000021771	protein_coding	Vdac2	ENSMUST00000142084	retained_intron		14	1	21842275	2039
ENSMUSG00000046707	protein_coding	Csnk2a2	ENSMUST00000212616	protein_coding		8	-1	95487586	706
ENSMUSG00000076764	TR_V_gene	Trav6-2	ENSMUST00000103573	TR_V_gene	alternative2	14	1	52667411	338
ENSMUSG00000109999	lincRNA	Gm35368	ENSMUST00000209554	lincRNA		8	1	63545943	1244
ENSMUSG00000046707	protein_coding	Csnk2a2	ENSMUST00000212952	protein_coding		8	-1	95487579	714
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000125624	retained_intron		7	-1	126862377	1741
ENSMUSG00000118076	lincRNA	Gm50337	ENSMUST00000237516	lincRNA		19	1	44419610	1023
ENSMUSG00000110981	processed_transcript	Gm35940	ENSMUST00000215885	bidirectional_promoter_lncRNA		9	1	41805412	6542
ENSMUSG00000061755	protein_coding	Bod1l	ENSMUST00000201291	processed_transcript		5	-1	41824042	665
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000206349	protein_coding	alternative1	7	-1	126861860	883
ENSMUSG00000110981	processed_transcript	Gm35940	ENSMUST00000213355	lincRNA		9	1	41815604	4797
ENSMUSG00000117796	lincRNA	Gm35406	ENSMUST00000237075	lincRNA		19	1	44453017	1824
ENSMUSG00000090564	antisense	A430057M04Rik	ENSMUST00000170150	antisense		14	1	21847578	2176
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000115660	protein_coding	alternative2	X	1	7884028	3094
ENSMUSG00000020122	protein_coding	Egfr	ENSMUST00000020329	protein_coding	principal1	11	1	16752211	10208
ENSMUSG00000109825	lincRNA	Gm45589	ENSMUST00000211745	lincRNA		8	-1	63739577	1024
ENSMUSG00000111511	processed_transcript	AC160966.1	ENSMUST00000217147	lincRNA		9	-1	41805683	933
ENSMUSG00000111511	processed_transcript	AC160966.1	ENSMUST00000216860	lincRNA		9	-1	41876268	1318
ENSMUSG00000090564	antisense	A430057M04Rik	ENSMUST00000169054	antisense		14	1	21848447	3835
ENSMUSG00000060703	protein_coding	Cd302	ENSMUST00000074606	protein_coding	alternative2	2	-1	60284488	1354
ENSMUSG00000006589	protein_coding	Aprt	ENSMUST00000213062	protein_coding		8	-1	122575489	560
ENSMUSG00000111511	processed_transcript	AC160966.1	ENSMUST00000214689	lincRNA		9	-1	41875551	1186
ENSMUSG00000109825	lincRNA	Gm45589	ENSMUST00000209366	lincRNA		8	-1	63739562	895
ENSMUSG00000111511	processed_transcript	AC160966.1	ENSMUST00000213182	bidirectional_promoter_lncRNA		9	-1	41876268	1185
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000208023	retained_intron		X	1	7884039	2213
ENSMUSG00000046707	protein_coding	Csnk2a2	ENSMUST00000212629	retained_intron		8	-1	95465985	728
ENSMUSG00000109825	lincRNA	Gm45589	ENSMUST00000210048	lincRNA		8	-1	63739574	657
ENSMUSG00000061755	protein_coding	Bod1l	ENSMUST00000202200	retained_intron		5	-1	41844292	3387
ENSMUSG00000060703	protein_coding	Cd302	ENSMUST00000028356	protein_coding	principal3	2	-1	60284418	1257
ENSMUSG00000103526	processed_pseudogene	Gm18900	ENSMUST00000193218	processed_pseudogene		1	-1	169592132	584
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000153764	processed_transcript		7	-1	126861732	719
ENSMUSG00000098106	processed_pseudogene	Gm5350	ENSMUST00000182057	processed_pseudogene		8	1	63778051	1002
ENSMUSG00000040943	protein_coding	Tet2	ENSMUST00000098603	protein_coding	principal3	3	-1	133544390	9179
ENSMUSG00000002108	protein_coding	Nr1h3	ENSMUST00000111356	protein_coding	principal1	2	-1	91195035	1955
ENSMUSG00000106318	IG_V_pseudogene	Igkv2-93-1	ENSMUST00000196774	IG_V_pseudogene		6	-1	68713098	272
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000206090	protein_coding		7	-1	126857730	438
ENSMUSG00000080198	processed_pseudogene	Rpl10a-ps4	ENSMUST00000116410	processed_pseudogene		2	-1	60275574	631
ENSMUSG00000105533	TR_V_gene	Trav7d-2	ENSMUST00000200127	TR_V_gene	principal1	14	1	52683964	337
ENSMUSG00000020122	protein_coding	Egfr	ENSMUST00000102884	protein_coding		11	1	16752203	2943
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000206968	protein_coding		7	-1	126862361	813
ENSMUSG00000040943	protein_coding	Tet2	ENSMUST00000199381	retained_intron		3	-1	133474819	6362
ENSMUSG00000036777	protein_coding	Anln	ENSMUST00000040912	protein_coding	principal1	9	-1	22389188	4605
ENSMUSG00000103267	processed_pseudogene	Gm36980	ENSMUST00000195643	processed_pseudogene		1	-1	169596939	622
ENSMUSG00000053081	antisense	1700069B07Rik	ENSMUST00000191155	antisense		7	1	121707075	939
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000205958	nonsense_mediated_decay		7	-1	126861783	502
ENSMUSG00000053081	antisense	1700069B07Rik	ENSMUST00000065310	antisense		7	1	121707189	823
ENSMUSG00000082819	TR_V_pseudogene	Trav4d-2	ENSMUST00000120914	TR_V_pseudogene		14	1	52710913	335
ENSMUSG00000040943	protein_coding	Tet2	ENSMUST00000196398	protein_coding	alternative2	3	-1	133544368	9021
ENSMUSG00000002108	protein_coding	Nr1h3	ENSMUST00000002177	protein_coding	principal1	2	-1	91195116	1802
ENSMUSG00000020122	protein_coding	Egfr	ENSMUST00000125984	protein_coding		11	1	16878150	463
ENSMUSG00000111156	bidirectional_promoter_lncRNA	Gm48814	ENSMUST00000213590	bidirectional_promoter_lncRNA		9	1	41876319	770
ENSMUSG00000036777	protein_coding	Anln	ENSMUST00000215006	protein_coding		9	-1	22353347	718
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000154881	retained_intron		7	-1	126861869	5328
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000132552	processed_transcript		7	-1	126861791	428
ENSMUSG00000036777	protein_coding	Anln	ENSMUST00000217010	retained_intron		9	-1	22351256	554
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000205349	protein_coding		7	-1	126861844	453
ENSMUSG00000046707	protein_coding	Csnk2a2	ENSMUST00000212338	retained_intron		8	-1	95488037	856
ENSMUSG00000040943	protein_coding	Tet2	ENSMUST00000197211	retained_intron		3	-1	133471817	3186
ENSMUSG00000036777	protein_coding	Anln	ENSMUST00000216897	retained_intron		9	-1	22352282	4206
ENSMUSG00000040943	protein_coding	Tet2	ENSMUST00000198974	protein_coding		3	-1	133476570	472
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000129812	protein_coding		7	-1	126861648	379
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000115663	protein_coding	principal4	X	1	7884244	1527
ENSMUSG00000046707	protein_coding	Csnk2a2	ENSMUST00000212441	nonsense_mediated_decay		8	-1	95488461	495
ENSMUSG00000040943	protein_coding	Tet2	ENSMUST00000199176	retained_intron		3	-1	133478926	3852
ENSMUSG00000036777	protein_coding	Anln	ENSMUST00000216793	protein_coding		9	-1	22356166	443
ENSMUSG00000030689	protein_coding	Ino80e	ENSMUST00000144056	processed_transcript		7	-1	126861848	347
ENSMUSG00000040943	protein_coding	Tet2	ENSMUST00000200203	retained_intron		3	-1	133480682	1627
ENSMUSG00000020122	protein_coding	Egfr	ENSMUST00000138518	processed_transcript		11	1	16905185	716
ENSMUSG00000002108	protein_coding	Nr1h3	ENSMUST00000111355	protein_coding		2	-1	91194885	1672
ENSMUSG00000020122	protein_coding	Egfr	ENSMUST00000139722	processed_transcript		11	1	16752230	446
ENSMUSG00000028884	protein_coding	Rpa2	ENSMUST00000102561	protein_coding	principal1	4	1	132768335	1813
ENSMUSG00000036777	protein_coding	Anln	ENSMUST00000215486	retained_intron		9	-1	22372224	622
ENSMUSG00000104294	processed_pseudogene	Gm38044	ENSMUST00000192964	processed_pseudogene		3	-1	42585599	487
ENSMUSG00000046707	protein_coding	Csnk2a2	ENSMUST00000211980	processed_transcript		8	-1	95488785	933
ENSMUSG00000040943	protein_coding	Tet2	ENSMUST00000197118	protein_coding		3	-1	133545139	423
ENSMUSG00000111069	sense_intronic	Gm48646	ENSMUST00000214468	sense_intronic		9	-1	22371779	1228
ENSMUSG00000046707	protein_coding	Csnk2a2	ENSMUST00000212615	processed_transcript		8	-1	95490039	445
ENSMUSG00000102149	processed_pseudogene	Gm9723	ENSMUST00000192100	processed_pseudogene		3	1	43250387	457
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000096514	protein_coding		X	1	7884310	1757
ENSMUSG00000085091	antisense	Egfros	ENSMUST00000150329	antisense		11	-1	16830702	4063
ENSMUSG00000040943	protein_coding	Tet2	ENSMUST00000196292	retained_intron		3	-1	133544302	726
ENSMUSG00000002108	protein_coding	Nr1h3	ENSMUST00000111354	protein_coding	principal1	2	-1	91195151	1738
ENSMUSG00000040943	protein_coding	Tet2	ENSMUST00000195913	processed_transcript		3	-1	133544286	484
ENSMUSG00000028884	protein_coding	Rpa2	ENSMUST00000130090	retained_intron		4	1	132768376	823
ENSMUSG00000105085	antisense	Gm42567	ENSMUST00000199268	antisense		3	1	133545097	352
ENSMUSG00000114006	lincRNA	Gm47997	ENSMUST00000223047	lincRNA		12	-1	22517317	552
ENSMUSG00000002108	protein_coding	Nr1h3	ENSMUST00000130031	retained_intron		2	-1	91192744	1604
ENSMUSG00000006589	protein_coding	Aprt	ENSMUST00000006764	protein_coding	principal1	8	-1	122576890	849
ENSMUSG00000028884	protein_coding	Rpa2	ENSMUST00000153046	processed_transcript		4	1	132768332	367
ENSMUSG00000002108	protein_coding	Nr1h3	ENSMUST00000133261	retained_intron		2	-1	91190935	574
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000155967	nonsense_mediated_decay		X	1	7884328	1991
ENSMUSG00000028884	protein_coding	Rpa2	ENSMUST00000133415	retained_intron		4	1	132768635	533
ENSMUSG00000002108	protein_coding	Nr1h3	ENSMUST00000136234	processed_transcript		2	-1	91202834	378
ENSMUSG00000113356	unprocessed_pseudogene	Gm48012	ENSMUST00000220706	unprocessed_pseudogene		12	1	22552169	1302
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000208640	protein_coding		X	1	7884333	486
ENSMUSG00000028884	protein_coding	Rpa2	ENSMUST00000156968	protein_coding		4	1	132775128	624
ENSMUSG00000113242	processed_pseudogene	Gm48016	ENSMUST00000221456	processed_pseudogene		12	1	22559021	181
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000207114	protein_coding		X	1	7884333	584
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000208633	protein_coding		X	1	7884333	719
ENSMUSG00000032449	protein_coding	Slc25a36	ENSMUST00000085206	protein_coding	principal1	9	-1	97111157	5227
ENSMUSG00000028884	protein_coding	Rpa2	ENSMUST00000130444	retained_intron		4	1	132770516	599
ENSMUSG00000101895	lincRNA	Gm28981	ENSMUST00000190863	lincRNA		1	-1	64303043	1288
ENSMUSG00000066242	protein_coding	Olfr467	ENSMUST00000208563	protein_coding	principal1	7	1	107812263	1852
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000208397	protein_coding	alternative2	X	1	7884333	1374
ENSMUSG00000066242	protein_coding	Olfr467	ENSMUST00000214253	protein_coding	principal1	7	1	107812263	1855
ENSMUSG00000113915	processed_pseudogene	Gm48019	ENSMUST00000221132	processed_pseudogene		12	1	22593133	108
ENSMUSG00000032449	protein_coding	Slc25a36	ENSMUST00000035024	protein_coding		9	-1	97084470	4043
ENSMUSG00000095261	processed_pseudogene	Gm17391	ENSMUST00000171036	processed_pseudogene		12	-1	22623087	126
ENSMUSG00000006589	protein_coding	Aprt	ENSMUST00000212093	protein_coding		8	-1	122576732	723
ENSMUSG00000113506	transcribed_unprocessed_pseudogene	Gm49377	ENSMUST00000221834	transcribed_unprocessed_pseudogene		12	-1	22587635	1206
ENSMUSG00000066242	protein_coding	Olfr467	ENSMUST00000084756	protein_coding		7	1	107814580	927
ENSMUSG00000113958	processed_pseudogene	Gm48020	ENSMUST00000223288	processed_pseudogene		12	-1	22597125	105
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000153620	protein_coding		X	1	7884347	830
ENSMUSG00000063317	protein_coding	Usp31	ENSMUST00000046929	protein_coding	principal1	7	-1	121707253	10198
ENSMUSG00000109192	unprocessed_pseudogene	Olfr468-ps1	ENSMUST00000207203	unprocessed_pseudogene		7	1	107816220	593
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000123277	protein_coding		X	1	7884378	663
ENSMUSG00000113123	processed_transcript	Gm40864	ENSMUST00000223403	processed_transcript		12	-1	22623345	734
ENSMUSG00000113123	processed_transcript	Gm40864	ENSMUST00000221745	processed_transcript		12	-1	22623119	329
ENSMUSG00000063317	protein_coding	Usp31	ENSMUST00000205473	retained_intron		7	-1	121666815	464
ENSMUSG00000031156	protein_coding	Slc35a2	ENSMUST00000208718	non_stop_decay		X	1	7892497	431
ENSMUSG00000095910	protein_coding	Olfr469	ENSMUST00000213252	protein_coding	principal1	7	-1	107825534	3164
ENSMUSG00000034384	protein_coding	Barhl2	ENSMUST00000086795	protein_coding	principal1	5	-1	106458166	2314
ENSMUSG00000095910	protein_coding	Olfr469	ENSMUST00000216431	processed_transcript		7	-1	107825541	1806
ENSMUSG00000095910	protein_coding	Olfr469	ENSMUST00000075704	protein_coding	principal1	7	-1	107823467	945
ENSMUSG00000038984	protein_coding	Tspyl5	ENSMUST00000042021	protein_coding	principal1	15	-1	33687884	4010
ENSMUSG00000108863	unprocessed_pseudogene	Gm5002	ENSMUST00000207145	unprocessed_pseudogene		7	-1	107840733	223
ENSMUSG00000109542	protein_coding	Olfr470	ENSMUST00000219309	processed_transcript		7	-1	107846408	1702
ENSMUSG00000032449	protein_coding	Slc25a36	ENSMUST00000153070	nonsense_mediated_decay		9	-1	97111007	1203
ENSMUSG00000108763	protein_coding	Gm36028	ENSMUST00000205465	retained_intron		16	-1	37856428	1107
ENSMUSG00000032449	protein_coding	Slc25a36	ENSMUST00000148995	retained_intron		9	-1	97085261	532
ENSMUSG00000108763	protein_coding	Gm36028	ENSMUST00000205931	protein_coding	principal1	16	-1	37861146	1161
ENSMUSG00000109542	protein_coding	Olfr470	ENSMUST00000220193	protein_coding	principal1	7	-1	107847490	3080
ENSMUSG00000032449	protein_coding	Slc25a36	ENSMUST00000155291	processed_transcript		9	-1	97090027	894
ENSMUSG00000109542	protein_coding	Olfr470	ENSMUST00000073059	protein_coding	principal1	7	-1	107845731	945
ENSMUSG00000072576	processed_pseudogene	Gm16020	ENSMUST00000084281	processed_pseudogene		5	1	134463240	210
ENSMUSG00000032449	protein_coding	Slc25a36	ENSMUST00000137372	processed_transcript		9	-1	97090144	516
ENSMUSG00000091605	transcribed_unprocessed_pseudogene	Gm8256	ENSMUST00000228692	processed_transcript		14	1	44613533	591
ENSMUSG00000018339	protein_coding	Gpx3	ENSMUST00000125094	protein_coding		11	1	54902453	829
ENSMUSG00000091605	transcribed_unprocessed_pseudogene	Gm8256	ENSMUST00000169178	transcribed_unprocessed_pseudogene		14	1	44614692	453
ENSMUSG00000109788	unprocessed_pseudogene	Olfr471	ENSMUST00000210091	unprocessed_pseudogene		7	-1	107861999	936
ENSMUSG00000091605	transcribed_unprocessed_pseudogene	Gm8256	ENSMUST00000227964	processed_transcript		14	1	44616936	828
ENSMUSG00000006589	protein_coding	Aprt	ENSMUST00000213030	processed_transcript		8	-1	122576818	660
ENSMUSG00000032449	protein_coding	Slc25a36	ENSMUST00000124250	protein_coding		9	-1	97100220	3229
ENSMUSG00000115801	lincRNA	AC160336.1	ENSMUST00000226445	lincRNA		14	-1	44637201	93147
ENSMUSG00000066245	processed_pseudogene	Gm10156	ENSMUST00000122364	processed_pseudogene		7	1	107863039	462
ENSMUSG00000106802	TEC	Gm42885	ENSMUST00000200763	TEC		5	-1	134485446	4214
ENSMUSG00000090736	unprocessed_pseudogene	Gm9593	ENSMUST00000166034	unprocessed_pseudogene		14	1	44623288	469
ENSMUSG00000006589	protein_coding	Aprt	ENSMUST00000213029	nonsense_mediated_decay		8	-1	122576853	929
ENSMUSG00000115362	processed_pseudogene	Gm49088	ENSMUST00000228506	processed_pseudogene		15	-1	33757789	320
ENSMUSG00000086220	antisense	Gm16599	ENSMUST00000148082	antisense		5	1	136274996	1182
ENSMUSG00000006589	protein_coding	Aprt	ENSMUST00000211823	protein_coding		8	-1	122576671	590
ENSMUSG00000115318	TEC	Gm49089	ENSMUST00000227474	TEC		15	1	33831448	2906
ENSMUSG00000030382	protein_coding	Slc27a5	ENSMUST00000032539	protein_coding	principal1	7	-1	12998150	2288
ENSMUSG00000032449	protein_coding	Slc25a36	ENSMUST00000148337	retained_intron		9	-1	97110987	685
ENSMUSG00000115605	processed_pseudogene	Gm9643	ENSMUST00000228920	processed_pseudogene		15	1	34012652	371
ENSMUSG00000066756	protein_coding	Igfl3	ENSMUST00000152973	protein_coding	principal1	7	1	18176494	575
ENSMUSG00000032449	protein_coding	Slc25a36	ENSMUST00000152632	retained_intron		9	-1	97111033	1060
ENSMUSG00000006589	protein_coding	Aprt	ENSMUST00000212834	processed_transcript		8	-1	122576570	554
ENSMUSG00000049580	protein_coding	Tsku	ENSMUST00000094161	protein_coding	principal1	7	-1	98361288	2760
ENSMUSG00000006589	protein_coding	Aprt	ENSMUST00000213017	processed_transcript		8	-1	122576836	483
ENSMUSG00000084911	antisense	Gm16185	ENSMUST00000125071	antisense		9	1	97085326	3207
ENSMUSG00000030382	protein_coding	Slc27a5	ENSMUST00000120903	protein_coding		7	-1	12998192	1468
ENSMUSG00000092165	protein_coding	Gm5624	ENSMUST00000165769	protein_coding		14	-1	44562827	1748
ENSMUSG00000018339	protein_coding	Gpx3	ENSMUST00000082430	protein_coding	principal1	11	1	54902772	1594
ENSMUSG00000006589	protein_coding	Aprt	ENSMUST00000211810	retained_intron		8	-1	122576909	595
ENSMUSG00000092165	protein_coding	Gm5624	ENSMUST00000228629	nonsense_mediated_decay		14	-1	44627938	1734
ENSMUSG00000049580	protein_coding	Tsku	ENSMUST00000167405	protein_coding	principal1	7	-1	98361292	2597
ENSMUSG00000030382	protein_coding	Slc27a5	ENSMUST00000155192	retained_intron		7	-1	12996548	602
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000106251	protein_coding	principal3	7	1	127967457	5536
ENSMUSG00000104484	TEC	Gm33142	ENSMUST00000193913	TEC		8	1	120685399	867
ENSMUSG00000030382	protein_coding	Slc27a5	ENSMUST00000133977	protein_coding		7	-1	12997677	584
ENSMUSG00000101502	processed_pseudogene	Rpl7a-ps10	ENSMUST00000190579	processed_pseudogene		9	1	97179179	798
ENSMUSG00000028873	protein_coding	Cdca8	ENSMUST00000084296	protein_coding	principal2	4	-1	124936917	1626
ENSMUSG00000092165	protein_coding	Gm5624	ENSMUST00000227882	protein_coding	principal5	14	-1	44627925	842
ENSMUSG00000024121	protein_coding	Atp6v0c	ENSMUST00000151061	processed_transcript		17	-1	24167029	2567
ENSMUSG00000101836	unprocessed_pseudogene	Gm28968	ENSMUST00000190413	unprocessed_pseudogene		Y	-1	72635907	696
ENSMUSG00000102008	processed_pseudogene	Gm28495	ENSMUST00000188452	processed_pseudogene		Y	-1	72672523	315
ENSMUSG00000018339	protein_coding	Gpx3	ENSMUST00000149324	protein_coding		11	1	54902926	693
ENSMUSG00000028873	protein_coding	Cdca8	ENSMUST00000030690	protein_coding	alternative2	4	-1	124936873	1264
ENSMUSG00000092165	protein_coding	Gm5624	ENSMUST00000226458	processed_transcript		14	-1	44627913	671
ENSMUSG00000100869	unprocessed_pseudogene	Gm20846	ENSMUST00000188700	unprocessed_pseudogene		Y	-1	72820330	693
ENSMUSG00000092165	protein_coding	Gm5624	ENSMUST00000178184	protein_coding	alternative2	14	-1	44562697	492
ENSMUSG00000106309	processed_pseudogene	Gm40414	ENSMUST00000197608	processed_pseudogene		6	-1	68734661	481
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000077609	protein_coding	alternative2	7	1	127967490	1831
ENSMUSG00000072594	processed_pseudogene	Gm16439	ENSMUST00000100687	processed_pseudogene		14	1	44596665	564
ENSMUSG00000101277	unprocessed_pseudogene	Gm20847	ENSMUST00000186066	unprocessed_pseudogene		Y	-1	72895204	678
ENSMUSG00000049580	protein_coding	Tsku	ENSMUST00000179780	protein_coding	principal1	7	-1	98360079	2404
ENSMUSG00000049580	protein_coding	Tsku	ENSMUST00000165901	protein_coding	principal1	7	-1	98360079	2514
ENSMUSG00000098814	IG_V_gene	Igkv19-93	ENSMUST00000196863	IG_V_gene	principal5	6	-1	68736780	363
ENSMUSG00000099371	unprocessed_pseudogene	Gm20848	ENSMUST00000190836	unprocessed_pseudogene		Y	-1	72968709	678
ENSMUSG00000091122	protein_coding	Gm8247	ENSMUST00000170094	protein_coding	principal5	14	1	44583153	1405
ENSMUSG00000098814	IG_V_gene	Igkv19-93	ENSMUST00000183936	IG_V_gene	alternative2	6	-1	68736764	344
ENSMUSG00000091122	protein_coding	Gm8247	ENSMUST00000178759	protein_coding	alternative2	14	1	44585478	375
ENSMUSG00000028873	protein_coding	Cdca8	ENSMUST00000135571	processed_transcript		4	-1	124936407	712
ENSMUSG00000060301	protein_coding	2610008E11Rik	ENSMUST00000039271	protein_coding	principal1	10	-1	79097600	4229
ENSMUSG00000049580	protein_coding	Tsku	ENSMUST00000206414	protein_coding	principal1	7	-1	98361288	2310
ENSMUSG00000030945	protein_coding	Acsm2	ENSMUST00000098084	protein_coding	alternative2	7	1	119554340	2099
ENSMUSG00000060301	protein_coding	2610008E11Rik	ENSMUST00000218854	protein_coding		10	-1	79097538	643
ENSMUSG00000028873	protein_coding	Cdca8	ENSMUST00000125801	processed_transcript		4	-1	124936781	645
ENSMUSG00000076531	IG_V_gene	Igkv4-92	ENSMUST00000103332	IG_V_gene	principal1	6	-1	68755593	351
ENSMUSG00000028873	protein_coding	Cdca8	ENSMUST00000147074	retained_intron		4	-1	124936842	3358
ENSMUSG00000049580	protein_coding	Tsku	ENSMUST00000206770	processed_transcript		7	-1	98360187	351
ENSMUSG00000060301	protein_coding	2610008E11Rik	ENSMUST00000220220	protein_coding		10	-1	79097525	799
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000137464	processed_transcript		7	1	127967491	354
ENSMUSG00000060301	protein_coding	2610008E11Rik	ENSMUST00000219729	retained_intron		10	-1	79097579	1510
ENSMUSG00000049580	protein_coding	Tsku	ENSMUST00000165257	protein_coding	principal1	7	-1	98361328	2514
ENSMUSG00000107259	processed_pseudogene	Gm5298	ENSMUST00000201122	processed_pseudogene		5	-1	41854201	892
ENSMUSG00000018126	protein_coding	Baiap2l2	ENSMUST00000165408	protein_coding	principal1	15	-1	79285537	2100
ENSMUSG00000028873	protein_coding	Cdca8	ENSMUST00000165281	protein_coding		4	-1	124939311	771
ENSMUSG00000049580	protein_coding	Tsku	ENSMUST00000164726	protein_coding	principal1	7	-1	98361288	2620
ENSMUSG00000097018	lincRNA	Gm26872	ENSMUST00000180862	lincRNA		5	-1	106471007	2261
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000172468	retained_intron		17	1	33929543	753
ENSMUSG00000099658	processed_pseudogene	Gm28980	ENSMUST00000187877	processed_pseudogene		1	-1	64454577	219
ENSMUSG00000024121	protein_coding	Atp6v0c	ENSMUST00000024932	protein_coding	principal1	17	-1	24169461	1183
ENSMUSG00000018126	protein_coding	Baiap2l2	ENSMUST00000169462	retained_intron		15	-1	79285442	2276
ENSMUSG00000018126	protein_coding	Baiap2l2	ENSMUST00000170254	processed_transcript		15	-1	79259351	486
ENSMUSG00000112980	bidirectional_promoter_lncRNA	D430020J02Rik	ENSMUST00000220477	bidirectional_promoter_lncRNA		12	-1	116405210	2941
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000175903	protein_coding		3	1	88605966	3700
ENSMUSG00000030366	protein_coding	Ceacam12	ENSMUST00000032520	protein_coding	principal3	7	1	18065929	1056
ENSMUSG00000018126	protein_coding	Baiap2l2	ENSMUST00000167970	retained_intron		15	-1	79261297	283
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176226	processed_transcript		3	1	88607454	343
ENSMUSG00000019867	protein_coding	Gje1	ENSMUST00000020016	protein_coding	principal1	10	-1	14718214	1480
ENSMUSG00000018126	protein_coding	Baiap2l2	ENSMUST00000170955	protein_coding		15	-1	79285493	1058
ENSMUSG00000028743	protein_coding	Akr7a5	ENSMUST00000073787	protein_coding	principal1	4	1	139310744	1288
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000011934	protein_coding		2	-1	76982455	81999
ENSMUSG00000093798	processed_pseudogene	Gm8355	ENSMUST00000177767	processed_pseudogene		10	-1	14747302	1941
ENSMUSG00000111682	lincRNA	Gm47543	ENSMUST00000215094	lincRNA		9	1	49954878	824
ENSMUSG00000028743	protein_coding	Akr7a5	ENSMUST00000153645	processed_transcript		4	1	139316582	702
ENSMUSG00000030366	protein_coding	Ceacam12	ENSMUST00000108487	protein_coding	alternative2	7	1	18065939	1495
ENSMUSG00000098012	processed_pseudogene	Gm8907	ENSMUST00000182240	processed_pseudogene		9	-1	50187045	1003
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000174196	retained_intron		7	1	127967491	2374
ENSMUSG00000024121	protein_coding	Atp6v0c	ENSMUST00000098862	protein_coding	principal1	17	-1	24169677	796
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000175749	processed_transcript		3	1	88607659	624
ENSMUSG00000031639	protein_coding	Tlr3	ENSMUST00000034056	protein_coding	principal1	8	-1	45410619	4407
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176514	retained_intron		3	1	88614421	591
ENSMUSG00000024121	protein_coding	Atp6v0c	ENSMUST00000148541	protein_coding		17	-1	24169648	609
ENSMUSG00000106142	processed_pseudogene	Gm17937	ENSMUST00000197908	processed_pseudogene		5	1	106610292	742
ENSMUSG00000073893	protein_coding	Olfr472	ENSMUST00000209670	protein_coding	principal1	7	1	107897902	5290
ENSMUSG00000020125	protein_coding	Elane	ENSMUST00000046091	protein_coding	principal1	10	1	79886247	984
ENSMUSG00000031639	protein_coding	Tlr3	ENSMUST00000167106	protein_coding	principal1	8	-1	45410619	4093
ENSMUSG00000099061	lincRNA	Gm28050	ENSMUST00000131029	lincRNA		5	-1	106574715	663
ENSMUSG00000073893	protein_coding	Olfr472	ENSMUST00000216937	protein_coding	principal1	7	1	107897902	5392
ENSMUSG00000018661	protein_coding	Cog1	ENSMUST00000018805	protein_coding	principal2	11	1	113649169	3935
ENSMUSG00000030366	protein_coding	Ceacam12	ENSMUST00000108483	protein_coding	alternative2	7	1	18065991	1827
ENSMUSG00000099061	lincRNA	Gm28050	ENSMUST00000124394	lincRNA		5	-1	106574718	449
ENSMUSG00000024121	protein_coding	Atp6v0c	ENSMUST00000156061	processed_transcript		17	-1	24169066	607
ENSMUSG00000031639	protein_coding	Tlr3	ENSMUST00000210013	protein_coding		8	-1	45398286	2417
ENSMUSG00000024121	protein_coding	Atp6v0c	ENSMUST00000150647	processed_transcript		17	-1	24169702	351
ENSMUSG00000101262	processed_pseudogene	Gm8326	ENSMUST00000188705	processed_pseudogene		1	1	46414502	1953
ENSMUSG00000018661	protein_coding	Cog1	ENSMUST00000063776	protein_coding	alternative2	11	1	113649328	1476
ENSMUSG00000098302	processed_transcript	Gm28039	ENSMUST00000149128	processed_transcript		5	-1	106696571	254
ENSMUSG00000111897	processed_pseudogene	Gm19810	ENSMUST00000218521	processed_pseudogene		10	1	79888712	251
ENSMUSG00000104706	TEC	Gm43421	ENSMUST00000200044	TEC		5	-1	106655713	2905
ENSMUSG00000018661	protein_coding	Cog1	ENSMUST00000123085	retained_intron		11	1	113654687	882
ENSMUSG00000073893	protein_coding	Olfr472	ENSMUST00000210420	protein_coding	principal1	7	1	107902627	1083
ENSMUSG00000019865	protein_coding	Nmbr	ENSMUST00000191238	protein_coding		10	1	14705591	640
ENSMUSG00000018661	protein_coding	Cog1	ENSMUST00000148736	protein_coding		11	1	113657375	884
ENSMUSG00000019865	protein_coding	Nmbr	ENSMUST00000187449	processed_transcript		10	1	14705597	447
ENSMUSG00000024063	protein_coding	Lbh	ENSMUST00000024857	protein_coding	principal1	17	1	72918305	3069
ENSMUSG00000108545	antisense	Gm44613	ENSMUST00000205637	antisense		7	-1	18186908	877
ENSMUSG00000019865	protein_coding	Nmbr	ENSMUST00000188021	processed_transcript		10	1	14705609	910
ENSMUSG00000118507	unprocessed_pseudogene	AL807811.1	ENSMUST00000239093	unprocessed_pseudogene		4	-1	139337180	257
ENSMUSG00000018661	protein_coding	Cog1	ENSMUST00000142069	protein_coding		11	1	113657512	862
ENSMUSG00000108545	antisense	Gm44613	ENSMUST00000205962	antisense		7	-1	18186952	691
ENSMUSG00000112993	processed_pseudogene	Gm48030	ENSMUST00000220677	processed_pseudogene		12	-1	22631462	105
ENSMUSG00000019865	protein_coding	Nmbr	ENSMUST00000190114	protein_coding		10	1	14705621	662
ENSMUSG00000031639	protein_coding	Tlr3	ENSMUST00000209772	protein_coding	principal1	8	-1	45410380	4096
ENSMUSG00000018661	protein_coding	Cog1	ENSMUST00000134418	protein_coding		11	1	113657530	858
ENSMUSG00000024063	protein_coding	Lbh	ENSMUST00000148556	nonsense_mediated_decay		17	1	72921188	336
ENSMUSG00000114107	processed_pseudogene	Gm48031	ENSMUST00000220556	processed_pseudogene		12	1	22666701	144
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000199243	protein_coding	alternative2	5	-1	137307666	2988
ENSMUSG00000019865	protein_coding	Nmbr	ENSMUST00000186175	retained_intron		10	1	14705627	672
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000128851	retained_intron		7	1	127967491	4909
ENSMUSG00000117096	lincRNA	Gm30420	ENSMUST00000233236	lincRNA		17	-1	73029078	2034
ENSMUSG00000019278	protein_coding	Dpep1	ENSMUST00000019422	protein_coding	principal1	8	1	123186242	2236
ENSMUSG00000030945	protein_coding	Acsm2	ENSMUST00000167935	protein_coding	principal3	7	1	119561493	6738
ENSMUSG00000113296	processed_pseudogene	Gm48032	ENSMUST00000223030	processed_pseudogene		12	-1	22667632	105
ENSMUSG00000018661	protein_coding	Cog1	ENSMUST00000152653	nonsense_mediated_decay		11	1	113658578	497
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000121616	protein_coding		7	1	127967508	1102
ENSMUSG00000023737	antisense	1700082M22Rik	ENSMUST00000171130	antisense		8	1	104641807	509
ENSMUSG00000114008	processed_pseudogene	Gm48033	ENSMUST00000220653	processed_pseudogene		12	-1	22671136	375
ENSMUSG00000111589	processed_pseudogene	Gm4042	ENSMUST00000216946	processed_pseudogene		9	1	50215079	637
ENSMUSG00000031639	protein_coding	Tlr3	ENSMUST00000211370	protein_coding		8	-1	45410618	707
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000197466	protein_coding	alternative2	5	-1	137307666	2972
ENSMUSG00000023737	antisense	1700082M22Rik	ENSMUST00000067136	antisense		8	1	104652617	2022
ENSMUSG00000019278	protein_coding	Dpep1	ENSMUST00000212773	protein_coding		8	1	123193494	780
ENSMUSG00000018661	protein_coding	Cog1	ENSMUST00000137878	protein_coding		11	1	113659283	513
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000123151	retained_intron		7	1	127971787	2158
ENSMUSG00000113413	unprocessed_pseudogene	Gm21941	ENSMUST00000221121	unprocessed_pseudogene		12	-1	22698887	562
ENSMUSG00000110916	lincRNA	2310003N18Rik	ENSMUST00000215655	lincRNA		9	-1	50233182	458
ENSMUSG00000019278	protein_coding	Dpep1	ENSMUST00000212409	protein_coding		8	1	123193951	985
ENSMUSG00000113569	processed_pseudogene	Gm48035	ENSMUST00000220517	processed_pseudogene		12	-1	22726590	1449
ENSMUSG00000030945	protein_coding	Acsm2	ENSMUST00000209069	processed_transcript		7	1	119561712	550
ENSMUSG00000030945	protein_coding	Acsm2	ENSMUST00000130583	protein_coding		7	1	119561712	557
ENSMUSG00000113574	processed_pseudogene	Gm48037	ENSMUST00000223354	processed_pseudogene		12	-1	22745411	124
ENSMUSG00000031639	protein_coding	Tlr3	ENSMUST00000210996	protein_coding		8	-1	45410376	382
ENSMUSG00000111359	lincRNA	Gm39336	ENSMUST00000214933	lincRNA		9	-1	50301817	260
ENSMUSG00000031639	protein_coding	Tlr3	ENSMUST00000209651	protein_coding		8	-1	45410558	387
ENSMUSG00000110599	lincRNA	6030466F02Rik	ENSMUST00000212339	lincRNA		8	1	123733958	1434
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000154843	processed_transcript		7	1	127971875	600
ENSMUSG00000031639	protein_coding	Tlr3	ENSMUST00000209269	processed_transcript		8	-1	45411080	649
ENSMUSG00000089742	antisense	Gm15898	ENSMUST00000162213	antisense		8	1	120095060	627
ENSMUSG00000058443	protein_coding	Rpl10-ps3	ENSMUST00000076364	protein_coding	principal1	9	-1	50344968	768
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000177023	protein_coding		3	1	88614609	757
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000155941	retained_intron		7	1	127974143	516
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000205261	retained_intron		7	1	127974975	1859
ENSMUSG00000102530	TEC	Gm37228	ENSMUST00000193574	TEC		3	-1	133634758	331
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000136289	retained_intron		7	1	127975684	600
ENSMUSG00000105952	lincRNA	Gm40153	ENSMUST00000197904	lincRNA		3	-1	133663391	637
ENSMUSG00000030945	protein_coding	Acsm2	ENSMUST00000084647	protein_coding	alternative2	7	1	119561720	2051
ENSMUSG00000031639	protein_coding	Tlr3	ENSMUST00000210354	processed_transcript		8	-1	45410377	393
ENSMUSG00000019865	protein_coding	Nmbr	ENSMUST00000020015	protein_coding	principal1	10	1	14760157	1599
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000174632	protein_coding		7	1	127977314	390
ENSMUSG00000086542	antisense	Gm13782	ENSMUST00000149515	antisense		6	1	30673944	352
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000205351	retained_intron		7	1	127978132	2055
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000141997	protein_coding		7	1	127980184	761
ENSMUSG00000030945	protein_coding	Acsm2	ENSMUST00000129766	protein_coding		7	1	119580603	810
ENSMUSG00000019865	protein_coding	Nmbr	ENSMUST00000186382	nonsense_mediated_decay		10	1	14760219	1354
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000172755	retained_intron		7	1	127980216	670
ENSMUSG00000101304	antisense	Plet1os	ENSMUST00000188703	antisense		9	-1	50507823	815
ENSMUSG00000019865	protein_coding	Nmbr	ENSMUST00000190751	protein_coding		10	1	14760219	921
ENSMUSG00000101304	antisense	Plet1os	ENSMUST00000190941	antisense		9	-1	50504805	1119
ENSMUSG00000105255	antisense	Gm42413	ENSMUST00000196216	antisense		5	1	45434389	338
ENSMUSG00000030795	protein_coding	Fus	ENSMUST00000079045	protein_coding		7	1	127983079	2623
ENSMUSG00000030945	protein_coding	Acsm2	ENSMUST00000208019	nonsense_mediated_decay		7	1	119582751	566
ENSMUSG00000024576	protein_coding	Csnk1a1	ENSMUST00000165123	protein_coding	principal2	18	1	61555274	4083
ENSMUSG00000096963	antisense	B230364G03Rik	ENSMUST00000181479	antisense		10	-1	14760720	1374
ENSMUSG00000030945	protein_coding	Acsm2	ENSMUST00000123638	protein_coding		7	1	119588851	631
ENSMUSG00000015112	protein_coding	Slc25a13	ENSMUST00000015256	protein_coding	principal1	6	-1	6217118	3067
ENSMUSG00000030945	protein_coding	Acsm2	ENSMUST00000129658	retained_intron		7	1	119590870	482
ENSMUSG00000030945	protein_coding	Acsm2	ENSMUST00000207977	protein_coding		7	1	119591271	429
ENSMUSG00000015748	protein_coding	Prpf3	ENSMUST00000015892	protein_coding	principal1	3	-1	95855885	2933
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000198526	nonsense_mediated_decay		5	-1	137307421	3001
ENSMUSG00000015748	protein_coding	Prpf3	ENSMUST00000159901	protein_coding		3	-1	95835665	575
ENSMUSG00000015112	protein_coding	Slc25a13	ENSMUST00000203551	processed_transcript		6	-1	6095203	631
ENSMUSG00000015112	protein_coding	Slc25a13	ENSMUST00000203990	processed_transcript		6	-1	6173951	464
ENSMUSG00000031879	protein_coding	Ciao2b	ENSMUST00000164884	protein_coding	principal1	8	-1	104641965	918
ENSMUSG00000015112	protein_coding	Slc25a13	ENSMUST00000177698	retained_intron		6	-1	6191319	616
ENSMUSG00000034889	protein_coding	Cactin	ENSMUST00000050867	protein_coding	principal1	10	1	81321103	2715
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000196109	protein_coding		5	-1	137299645	1660
ENSMUSG00000000216	protein_coding	Scnn1g	ENSMUST00000000221	protein_coding	principal1	7	1	121734479	2991
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000199756	protein_coding		5	-1	137297425	808
ENSMUSG00000034889	protein_coding	Cactin	ENSMUST00000218120	protein_coding		10	1	81323436	666
ENSMUSG00000015112	protein_coding	Slc25a13	ENSMUST00000188414	protein_coding	principal1	6	-1	6217173	3121
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000196960	retained_intron		5	-1	137296934	666
ENSMUSG00000097405	antisense	D630044L22Rik	ENSMUST00000181174	antisense		17	1	25951472	2964
ENSMUSG00000034889	protein_coding	Cactin	ENSMUST00000219285	retained_intron		10	1	81323502	600
ENSMUSG00000031879	protein_coding	Ciao2b	ENSMUST00000163140	nonsense_mediated_decay		8	-1	104641699	807
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000197144	retained_intron		5	-1	137297217	835
ENSMUSG00000058914	protein_coding	C1qtnf3	ENSMUST00000022853	protein_coding	principal3	15	1	10952332	2338
ENSMUSG00000073647	processed_pseudogene	Gm10557	ENSMUST00000097690	processed_pseudogene		18	-1	4198938	619
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000197409	retained_intron		5	-1	137296853	416
ENSMUSG00000108449	lincRNA	Gm44507	ENSMUST00000206249	lincRNA		7	-1	98415624	343
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000200643	retained_intron		5	-1	137297567	884
ENSMUSG00000108346	processed_pseudogene	Gm44980	ENSMUST00000205826	processed_pseudogene		7	-1	98437519	314
ENSMUSG00000099668	lincRNA	Gm29522	ENSMUST00000191530	lincRNA		Y	1	10658332	621
ENSMUSG00000100731	unprocessed_pseudogene	Gm29523	ENSMUST00000191415	unprocessed_pseudogene		Y	-1	10679128	699
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000197376	retained_intron		5	-1	137298547	600
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000199365	nonsense_mediated_decay		5	-1	137300009	599
ENSMUSG00000015748	protein_coding	Prpf3	ENSMUST00000160155	retained_intron		3	-1	95849574	2548
ENSMUSG00000058914	protein_coding	C1qtnf3	ENSMUST00000110523	protein_coding	alternative1	15	1	10952357	2088
ENSMUSG00000010025	protein_coding	Aldh3a2	ENSMUST00000066277	protein_coding		11	-1	61267185	2892
ENSMUSG00000032068	protein_coding	Plet1	ENSMUST00000114474	protein_coding	principal2	9	1	50494525	1689
ENSMUSG00000015748	protein_coding	Prpf3	ENSMUST00000163059	retained_intron		3	-1	95832808	592
ENSMUSG00000010025	protein_coding	Aldh3a2	ENSMUST00000208086	protein_coding		11	-1	61251010	1886
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000199605	nonsense_mediated_decay		5	-1	137300318	931
ENSMUSG00000031879	protein_coding	Ciao2b	ENSMUST00000093234	protein_coding		8	-1	104641701	639
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000196576	retained_intron		5	-1	137299886	516
ENSMUSG00000039307	protein_coding	Hexdc	ENSMUST00000106117	protein_coding	principal1	11	1	121204435	2149
ENSMUSG00000037326	protein_coding	Capn15	ENSMUST00000212735	retained_intron		17	-1	25985706	4922
ENSMUSG00000083404	unprocessed_pseudogene	Gm13019	ENSMUST00000120000	unprocessed_pseudogene		4	1	139342183	276
ENSMUSG00000053499	lincRNA	Gm5444	ENSMUST00000065956	lincRNA		13	1	4771651	2468
ENSMUSG00000032068	protein_coding	Plet1	ENSMUST00000188047	protein_coding	alternative2	9	1	50494527	739
ENSMUSG00000015748	protein_coding	Prpf3	ENSMUST00000161476	protein_coding	principal1	3	-1	95855753	2732
ENSMUSG00000117482	processed_pseudogene	Gm7400	ENSMUST00000234061	processed_pseudogene		18	-1	4294482	1058
ENSMUSG00000100074	unprocessed_pseudogene	Gm29524	ENSMUST00000190819	unprocessed_pseudogene		Y	-1	10713800	699
ENSMUSG00000024576	protein_coding	Csnk1a1	ENSMUST00000165721	protein_coding	alternative1	18	1	61555313	2323
ENSMUSG00000106069	lincRNA	Gm6135	ENSMUST00000198726	lincRNA		3	-1	133791504	372
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000112696	protein_coding	alternative2	5	-1	106696830	5785
ENSMUSG00000010025	protein_coding	Aldh3a2	ENSMUST00000074127	protein_coding	principal1	11	-1	61267185	3091
ENSMUSG00000034158	protein_coding	Lrrc58	ENSMUST00000078717	protein_coding	principal1	16	1	37868389	8604
ENSMUSG00000099676	processed_pseudogene	Gm29528	ENSMUST00000186699	processed_pseudogene		Y	-1	10727118	379
ENSMUSG00000104645	lincRNA	Gm30484	ENSMUST00000200327	lincRNA		3	-1	133818518	449
ENSMUSG00000113866	lincRNA	Gm47450	ENSMUST00000222131	lincRNA		13	-1	4943052	776
ENSMUSG00000095212	protein_coding	Olfr473	ENSMUST00000217618	protein_coding	principal1	7	1	107930446	2319
ENSMUSG00000015748	protein_coding	Prpf3	ENSMUST00000161482	processed_transcript		3	-1	95845167	554
ENSMUSG00000010025	protein_coding	Aldh3a2	ENSMUST00000108715	protein_coding		11	-1	61267185	2578
ENSMUSG00000024576	protein_coding	Csnk1a1	ENSMUST00000115246	protein_coding		18	1	61555318	1484
ENSMUSG00000113668	unprocessed_pseudogene	Gm47451	ENSMUST00000223476	unprocessed_pseudogene		13	-1	5216178	388
ENSMUSG00000024576	protein_coding	Csnk1a1	ENSMUST00000166990	protein_coding		18	1	61555318	1860
ENSMUSG00000015748	protein_coding	Prpf3	ENSMUST00000161420	retained_intron		3	-1	95846176	1800
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000199473	retained_intron		5	-1	137307473	2004
ENSMUSG00000083405	transcribed_processed_pseudogene	Gm15725	ENSMUST00000119947	transcribed_processed_pseudogene		16	1	37882542	1090
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000196394	retained_intron		5	-1	137300731	767
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000223263	nonsense_mediated_decay		5	-1	137302314	689
ENSMUSG00000115428	lincRNA	Gm41290	ENSMUST00000228182	lincRNA		15	-1	34037780	1859
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000047503	protein_coding	principal1	17	1	33929582	3252
ENSMUSG00000107792	sense_intronic	Gm43914	ENSMUST00000203592	sense_intronic		6	1	129418179	594
ENSMUSG00000095212	protein_coding	Olfr473	ENSMUST00000084761	protein_coding	principal1	7	1	107933522	933
ENSMUSG00000115440	processed_pseudogene	Gm49091	ENSMUST00000227515	processed_pseudogene		15	1	34053118	150
ENSMUSG00000015748	protein_coding	Prpf3	ENSMUST00000160109	nonsense_mediated_decay		3	-1	95853632	800
ENSMUSG00000010025	protein_coding	Aldh3a2	ENSMUST00000141368	processed_transcript		11	-1	61262335	632
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000197484	nonsense_mediated_decay		5	-1	137307640	476
ENSMUSG00000080708	processed_pseudogene	Ccnd3-ps	ENSMUST00000117963	processed_pseudogene		4	-1	139346180	881
ENSMUSG00000108410	TEC	Gm44740	ENSMUST00000205603	TEC		7	-1	121839065	1614
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000045466	protein_coding	principal2	5	-1	106695975	5569
ENSMUSG00000108892	processed_pseudogene	Gm9449	ENSMUST00000207265	processed_pseudogene		7	-1	107952356	1011
ENSMUSG00000015748	protein_coding	Prpf3	ENSMUST00000161073	retained_intron		3	-1	95855781	613
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000112695	protein_coding		5	-1	106696597	1915
ENSMUSG00000024576	protein_coding	Csnk1a1	ENSMUST00000163205	protein_coding	alternative1	18	1	61555328	3204
ENSMUSG00000010025	protein_coding	Aldh3a2	ENSMUST00000147291	processed_transcript		11	-1	61267464	917
ENSMUSG00000010025	protein_coding	Aldh3a2	ENSMUST00000128991	processed_transcript		11	-1	61267127	668
ENSMUSG00000094197	protein_coding	Olfr474	ENSMUST00000054434	protein_coding	principal1	7	1	107954643	933
ENSMUSG00000024576	protein_coding	Csnk1a1	ENSMUST00000165381	retained_intron		18	1	61555335	2275
ENSMUSG00000010025	protein_coding	Aldh3a2	ENSMUST00000149298	processed_transcript		11	-1	61267441	436
ENSMUSG00000037364	protein_coding	Srrt	ENSMUST00000040873	protein_coding	principal3	5	-1	137307674	3024
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000112694	processed_transcript		5	-1	106624390	1765
ENSMUSG00000044365	protein_coding	Cxxc4	ENSMUST00000197151	processed_transcript		3	1	134236484	1847
ENSMUSG00000095301	protein_coding	Olfr476	ENSMUST00000217173	protein_coding	principal1	7	1	107964803	2539
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000125895	processed_transcript		5	-1	106696805	836
ENSMUSG00000080959	unprocessed_pseudogene	Gm2003	ENSMUST00000118537	unprocessed_pseudogene		X	-1	25643661	636
ENSMUSG00000095301	protein_coding	Olfr476	ENSMUST00000077249	protein_coding	principal1	7	1	107967399	933
ENSMUSG00000015806	protein_coding	Qdpr	ENSMUST00000198258	protein_coding		5	-1	45450176	1172
ENSMUSG00000039307	protein_coding	Hexdc	ENSMUST00000124925	processed_transcript		11	1	121204758	3921
ENSMUSG00000039307	protein_coding	Hexdc	ENSMUST00000128913	processed_transcript		11	1	121204775	885
ENSMUSG00000096151	protein_coding	Olfr477	ENSMUST00000214677	protein_coding	principal1	7	1	107986693	2930
ENSMUSG00000039307	protein_coding	Hexdc	ENSMUST00000131009	processed_transcript		11	1	121204801	589
ENSMUSG00000095392	unprocessed_pseudogene	Gm7350	ENSMUST00000120964	unprocessed_pseudogene		X	-1	25845667	636
ENSMUSG00000096151	protein_coding	Olfr477	ENSMUST00000091605	protein_coding	principal1	7	1	107990367	933
ENSMUSG00000039307	protein_coding	Hexdc	ENSMUST00000124768	protein_coding		11	1	121206638	648
ENSMUSG00000019772	protein_coding	Vip	ENSMUST00000019906	protein_coding	principal1	10	1	5639218	1530
ENSMUSG00000086959	lincRNA	E330010L02Rik	ENSMUST00000136639	lincRNA		X	-1	25954696	966
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000173266	protein_coding		17	1	33929904	392
ENSMUSG00000083060	unprocessed_pseudogene	Gm14533	ENSMUST00000117088	unprocessed_pseudogene		X	1	26006671	93
ENSMUSG00000044365	protein_coding	Cxxc4	ENSMUST00000181904	protein_coding	principal2	3	1	134236491	5694
ENSMUSG00000050824	protein_coding	Sstr5	ENSMUST00000051864	protein_coding	principal1	17	-1	25497288	2733
ENSMUSG00000039307	protein_coding	Hexdc	ENSMUST00000151495	protein_coding		11	1	121207703	1896
ENSMUSG00000024576	protein_coding	Csnk1a1	ENSMUST00000170862	protein_coding	alternative1	18	1	61555339	2259
ENSMUSG00000097189	lincRNA	Gm26594	ENSMUST00000180383	lincRNA		3	1	95855966	1094
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000173153	retained_intron		17	1	33929974	684
ENSMUSG00000019772	protein_coding	Vip	ENSMUST00000217331	retained_intron		10	1	5640352	2532
ENSMUSG00000044365	protein_coding	Cxxc4	ENSMUST00000181597	retained_intron		3	1	134236495	1766
ENSMUSG00000024576	protein_coding	Csnk1a1	ENSMUST00000167187	protein_coding		18	1	61555689	1222
ENSMUSG00000039307	protein_coding	Hexdc	ENSMUST00000124761	protein_coding		11	1	121212050	1052
ENSMUSG00000044365	protein_coding	Cxxc4	ENSMUST00000199134	retained_intron		3	1	134240590	6328
ENSMUSG00000024576	protein_coding	Csnk1a1	ENSMUST00000164253	protein_coding		18	1	61575517	526
ENSMUSG00000046961	protein_coding	Gpr156	ENSMUST00000061274	protein_coding	principal1	16	1	37916496	4584
ENSMUSG00000039307	protein_coding	Hexdc	ENSMUST00000038831	protein_coding		11	1	121204433	2378
ENSMUSG00000050824	protein_coding	Sstr5	ENSMUST00000165183	protein_coding	principal1	17	-1	25497215	2506
ENSMUSG00000094813	protein_coding	Gm20777	ENSMUST00000187434	protein_coding	principal1	Y	-1	10752450	1341
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000234070	retained_intron		17	1	33930282	793
ENSMUSG00000094813	protein_coding	Gm20777	ENSMUST00000177818	protein_coding	principal1	Y	-1	10750826	699
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000127434	protein_coding		5	-1	106696826	2559
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000174410	retained_intron		17	1	33930883	365
ENSMUSG00000044365	protein_coding	Cxxc4	ENSMUST00000166288	protein_coding	alternative2	3	1	134236820	1290
ENSMUSG00000024576	protein_coding	Csnk1a1	ENSMUST00000170482	processed_transcript		18	1	61582844	2895
ENSMUSG00000099482	lincRNA	Gm28955	ENSMUST00000188167	lincRNA		Y	-1	10760126	2166
ENSMUSG00000097911	antisense	Gm26691	ENSMUST00000200444	antisense		3	-1	134102065	479
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000137285	protein_coding		5	-1	106696564	1210
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000122980	protein_coding		5	-1	106667617	730
ENSMUSG00000097911	antisense	Gm26691	ENSMUST00000181952	antisense		3	-1	134240494	4183
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000234226	protein_coding		17	1	33930892	553
ENSMUSG00000114098	lincRNA	Gm40660	ENSMUST00000220659	lincRNA		13	1	5454909	958
ENSMUSG00000114098	lincRNA	Gm40660	ENSMUST00000220493	lincRNA		13	1	5454909	671
ENSMUSG00000114098	lincRNA	Gm40660	ENSMUST00000223343	lincRNA		13	1	5454909	2591
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000174676	retained_intron		17	1	33930908	384
ENSMUSG00000097911	antisense	Gm26691	ENSMUST00000180471	antisense		3	-1	134240641	4401
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000173379	retained_intron		17	1	33930935	569
ENSMUSG00000079655	protein_coding	Gm5168	ENSMUST00000089165	protein_coding	principal1	X	-1	26051041	824
ENSMUSG00000114053	lincRNA	Gm35330	ENSMUST00000222871	lincRNA		13	-1	5724510	2925
ENSMUSG00000109954	antisense	Gm45371	ENSMUST00000210723	antisense		8	-1	26980001	459
ENSMUSG00000104556	lincRNA	Gm43192	ENSMUST00000198002	lincRNA		3	1	134160365	637
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000155495	protein_coding		5	-1	106696650	518
ENSMUSG00000079655	protein_coding	Gm5168	ENSMUST00000168002	protein_coding	principal1	X	-1	26049458	636
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000173258	retained_intron		17	1	33931211	788
ENSMUSG00000114053	lincRNA	Gm35330	ENSMUST00000223426	lincRNA		13	-1	5571128	1986
ENSMUSG00000106139	lincRNA	Gm30648	ENSMUST00000197430	lincRNA		3	1	134199948	424
ENSMUSG00000114053	lincRNA	Gm35330	ENSMUST00000221213	lincRNA		13	-1	5551032	668
ENSMUSG00000114053	lincRNA	Gm35330	ENSMUST00000220830	lincRNA		13	-1	5638945	743
ENSMUSG00000114053	lincRNA	Gm35330	ENSMUST00000223067	lincRNA		13	-1	5639324	1092
ENSMUSG00000114053	lincRNA	Gm35330	ENSMUST00000223254	lincRNA		13	-1	5724442	385
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000173718	retained_intron		17	1	33932052	720
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000124263	protein_coding		5	-1	106696564	620
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000173502	retained_intron		17	1	33932131	775
ENSMUSG00000034951	protein_coding	Cog7	ENSMUST00000206817	retained_intron		7	-1	121882517	3155
ENSMUSG00000106139	lincRNA	Gm30648	ENSMUST00000200648	lincRNA		3	1	134200086	1957
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000135108	protein_coding		5	-1	106696650	535
ENSMUSG00000099776	lincRNA	Gm28954	ENSMUST00000190031	lincRNA		Y	1	10806574	437
ENSMUSG00000105523	processed_pseudogene	Gm43193	ENSMUST00000197732	processed_pseudogene		3	1	134180911	441
ENSMUSG00000075229	protein_coding	Ccdc58	ENSMUST00000164916	protein_coding	principal1	16	1	36071685	1073
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000200481	retained_intron		5	-1	106695023	6256
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000173284	protein_coding		17	1	33933925	943
ENSMUSG00000054312	protein_coding	Mrps21	ENSMUST00000067298	protein_coding	principal1	3	-1	95871519	488
ENSMUSG00000044906	protein_coding	4930503L19Rik	ENSMUST00000213066	retained_intron		18	-1	70464150	1569
ENSMUSG00000110983	processed_pseudogene	Gm47679	ENSMUST00000213369	processed_pseudogene		10	1	5735819	213
ENSMUSG00000054312	protein_coding	Mrps21	ENSMUST00000132515	processed_transcript		3	-1	95863307	455
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000142391	retained_intron		5	-1	106696166	1484
ENSMUSG00000100742	unprocessed_pseudogene	Gm28953	ENSMUST00000188336	unprocessed_pseudogene		Y	-1	10886057	697
ENSMUSG00000100730	unprocessed_pseudogene	Gm20776	ENSMUST00000189940	unprocessed_pseudogene		Y	-1	10931277	700
ENSMUSG00000041354	protein_coding	Rgl2	ENSMUST00000174442	retained_intron		17	1	33935388	591
ENSMUSG00000054312	protein_coding	Mrps21	ENSMUST00000142437	protein_coding		3	-1	95871367	244
ENSMUSG00000100567	unprocessed_pseudogene	Gm28958	ENSMUST00000185864	unprocessed_pseudogene		Y	-1	11011198	703
ENSMUSG00000075229	protein_coding	Ccdc58	ENSMUST00000163352	protein_coding		16	1	36072080	391
ENSMUSG00000085795	protein_coding	Zfp703	ENSMUST00000209610	nonsense_mediated_decay		8	1	26977325	553
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000127572	processed_transcript		5	-1	106696546	1163
ENSMUSG00000094838	protein_coding	Gm20828	ENSMUST00000190516	protein_coding	principal1	Y	-1	11199374	1229
ENSMUSG00000057723	protein_coding	Krt33b	ENSMUST00000073890	protein_coding	principal1	11	-1	100029868	1581
ENSMUSG00000081492	processed_pseudogene	Gm9311	ENSMUST00000118042	processed_pseudogene		17	-1	73191685	1269
ENSMUSG00000094838	protein_coding	Gm20828	ENSMUST00000170889	protein_coding	principal1	Y	-1	11197848	687
ENSMUSG00000058728	protein_coding	Cd300c	ENSMUST00000106580	processed_transcript		11	-1	114969157	638
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000148192	processed_transcript		5	-1	106696544	642
ENSMUSG00000075229	protein_coding	Ccdc58	ENSMUST00000231523	retained_intron		16	1	36072084	506
ENSMUSG00000101319	processed_pseudogene	Gm28957	ENSMUST00000190174	processed_pseudogene		Y	-1	11251608	373
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176539	protein_coding		3	1	88615367	1003
ENSMUSG00000054312	protein_coding	Mrps21	ENSMUST00000072587	protein_coding	principal1	3	-1	95870619	405
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000127932	processed_transcript		5	-1	106697287	711
ENSMUSG00000010453	protein_coding	Kansl3	ENSMUST00000185912	protein_coding		1	-1	36369157	4527
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000156851	processed_transcript		5	-1	106696012	555
ENSMUSG00000097669	processed_pseudogene	Gm8649	ENSMUST00000181799	processed_pseudogene		6	-1	6329994	233
ENSMUSG00000046080	protein_coding	Clec9a	ENSMUST00000058352	protein_coding	alternative2	6	1	129408862	3293
ENSMUSG00000097175	processed_pseudogene	Gm27018	ENSMUST00000181136	processed_pseudogene		6	-1	6330222	225
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000177498	protein_coding	alternative2	3	1	88616143	3966
ENSMUSG00000085795	protein_coding	Zfp703	ENSMUST00000127097	protein_coding		8	1	26977325	587
ENSMUSG00000049606	protein_coding	Zfp644	ENSMUST00000112698	protein_coding	principal2	5	-1	106696830	5689
ENSMUSG00000117437	lincRNA	Gm33727	ENSMUST00000234604	lincRNA		17	1	25518585	484
ENSMUSG00000058728	protein_coding	Cd300c	ENSMUST00000092466	protein_coding	principal5	11	-1	114960417	700
ENSMUSG00000075229	protein_coding	Ccdc58	ENSMUST00000231468	protein_coding		16	1	36072084	392
ENSMUSG00000117420	lincRNA	Gm50025	ENSMUST00000234858	lincRNA		17	-1	25533045	847
ENSMUSG00000093482	lincRNA	Gm20619	ENSMUST00000181633	lincRNA		6	1	6248659	581
ENSMUSG00000117577	lincRNA	Gm33801	ENSMUST00000234713	lincRNA		17	-1	25538938	571
ENSMUSG00000101237	lincRNA	Gm29464	ENSMUST00000187692	lincRNA		5	1	106574875	513
ENSMUSG00000021392	protein_coding	Nol8	ENSMUST00000222197	protein_coding	principal2	13	1	49653078	4368
ENSMUSG00000075229	protein_coding	Ccdc58	ENSMUST00000099937	protein_coding		16	1	36081275	740
ENSMUSG00000046080	protein_coding	Clec9a	ENSMUST00000088075	protein_coding	principal3	6	1	129408863	1020
ENSMUSG00000086153	antisense	Gm12923	ENSMUST00000127060	antisense		4	-1	123094028	667
ENSMUSG00000058728	protein_coding	Cd300c	ENSMUST00000061637	protein_coding	alternative2	11	-1	114960417	690
ENSMUSG00000085795	protein_coding	Zfp703	ENSMUST00000154256	protein_coding	principal1	8	1	26977354	3152
ENSMUSG00000075229	protein_coding	Ccdc58	ENSMUST00000231773	processed_transcript		16	1	36089204	364
ENSMUSG00000021392	protein_coding	Nol8	ENSMUST00000221083	protein_coding		13	1	49653080	745
ENSMUSG00000093482	lincRNA	Gm20619	ENSMUST00000176283	lincRNA		6	1	6248687	1085
ENSMUSG00000075229	protein_coding	Ccdc58	ENSMUST00000231239	processed_transcript		16	1	36089381	395
ENSMUSG00000021392	protein_coding	Nol8	ENSMUST00000223467	protein_coding	alternative2	13	1	49653103	4765
ENSMUSG00000086050	antisense	Gm16045	ENSMUST00000123882	antisense		11	-1	117263437	2969
ENSMUSG00000093482	lincRNA	Gm20619	ENSMUST00000175814	lincRNA		6	1	6248690	2008
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176500	protein_coding	alternative2	3	1	88616143	4492
ENSMUSG00000085795	protein_coding	Zfp703	ENSMUST00000209411	protein_coding		8	1	26978185	336
ENSMUSG00000010453	protein_coding	Kansl3	ENSMUST00000010597	protein_coding		1	-1	36369181	4663
ENSMUSG00000021392	protein_coding	Nol8	ENSMUST00000223264	protein_coding		13	1	49653333	363
ENSMUSG00000045467	protein_coding	Ttll13	ENSMUST00000058266	protein_coding	principal1	7	1	80246376	3010
ENSMUSG00000093429	unprocessed_pseudogene	Vmn1r-ps145	ENSMUST00000175863	unprocessed_pseudogene		17	-1	20969484	424
ENSMUSG00000093482	lincRNA	Gm20619	ENSMUST00000181192	lincRNA		6	1	6248718	759
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000175779	protein_coding	alternative2	3	1	88616517	3065
ENSMUSG00000093482	lincRNA	Gm20619	ENSMUST00000181343	lincRNA		6	1	6299421	786
ENSMUSG00000037326	protein_coding	Capn15	ENSMUST00000212149	protein_coding	principal3	17	-1	25979893	4555
ENSMUSG00000046080	protein_coding	Clec9a	ENSMUST00000204860	protein_coding		6	1	129408955	446
ENSMUSG00000021392	protein_coding	Nol8	ENSMUST00000221142	protein_coding	alternative2	13	1	49653339	4381
ENSMUSG00000097900	processed_pseudogene	Gm8652	ENSMUST00000181363	processed_pseudogene		6	-1	6352267	964
ENSMUSG00000045467	protein_coding	Ttll13	ENSMUST00000206240	retained_intron		7	1	80246425	380
ENSMUSG00000049076	protein_coding	Acap2	ENSMUST00000230698	nonsense_mediated_decay		16	-1	31201245	6515
ENSMUSG00000010453	protein_coding	Kansl3	ENSMUST00000186470	protein_coding	principal1	1	-1	36368014	2801
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000099981	protein_coding	alternative2	2	-1	76982455	107355
ENSMUSG00000046080	protein_coding	Clec9a	ENSMUST00000164513	protein_coding	alternative2	6	1	129408955	714
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000029694	protein_coding	principal3	3	1	88621106	4300
ENSMUSG00000037326	protein_coding	Capn15	ENSMUST00000212789	nonsense_mediated_decay		17	-1	25985680	4536
ENSMUSG00000101789	unprocessed_pseudogene	Gm28956	ENSMUST00000189047	unprocessed_pseudogene		Y	-1	11426704	427
ENSMUSG00000025169	protein_coding	Ogfod3	ENSMUST00000026169	protein_coding	principal1	11	-1	121204711	1308
ENSMUSG00000081522	processed_pseudogene	Gm13170	ENSMUST00000119716	processed_pseudogene		4	1	146178124	643
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000134720	protein_coding		2	-1	76932240	24817
ENSMUSG00000100015	unprocessed_pseudogene	Gm28952	ENSMUST00000189285	unprocessed_pseudogene		Y	1	11465876	681
ENSMUSG00000021392	protein_coding	Nol8	ENSMUST00000222333	protein_coding		13	1	49653350	600
ENSMUSG00000099572	unprocessed_pseudogene	Gm28951	ENSMUST00000190742	unprocessed_pseudogene		Y	1	11681696	313
ENSMUSG00000086654	antisense	Gm13165	ENSMUST00000152923	antisense		4	-1	146205357	383
ENSMUSG00000021392	protein_coding	Nol8	ENSMUST00000223346	retained_intron		13	1	49666517	3239
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176804	protein_coding	alternative2	3	1	88621125	3086
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000148747	protein_coding		2	-1	76889925	10229
ENSMUSG00000037326	protein_coding	Capn15	ENSMUST00000212520	protein_coding	alternative2	17	-1	25985796	5216
ENSMUSG00000086654	antisense	Gm13165	ENSMUST00000153595	antisense		4	-1	146205732	252
ENSMUSG00000021392	protein_coding	Nol8	ENSMUST00000221328	retained_intron		13	1	49669702	2424
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000149616	protein_coding		2	-1	76868389	1633
ENSMUSG00000021392	protein_coding	Nol8	ENSMUST00000021824	protein_coding	principal2	13	1	49653350	4242
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000152185	protein_coding		2	-1	76868389	2130
ENSMUSG00000037326	protein_coding	Capn15	ENSMUST00000212099	nonsense_mediated_decay		17	-1	25985680	3687
ENSMUSG00000044906	protein_coding	4930503L19Rik	ENSMUST00000212683	nonsense_mediated_decay		18	-1	70472509	3317
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000130915	protein_coding		2	-1	76868389	1887
ENSMUSG00000045467	protein_coding	Ttll13	ENSMUST00000107381	retained_intron		7	1	80246555	2392
ENSMUSG00000037326	protein_coding	Capn15	ENSMUST00000211917	processed_transcript		17	-1	25985796	355
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000155365	protein_coding		2	-1	76868389	2037
ENSMUSG00000066007	protein_coding	Zfp600	ENSMUST00000151278	retained_intron		4	1	146156824	724
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000128071	protein_coding		2	-1	76868389	3162
ENSMUSG00000104995	IG_V_pseudogene	Gm42925	ENSMUST00000197359	IG_V_pseudogene		6	-1	68763692	285
ENSMUSG00000054469	protein_coding	Lclat1	ENSMUST00000130574	protein_coding		17	1	73107985	330
ENSMUSG00000037326	protein_coding	Capn15	ENSMUST00000212702	retained_intron		17	-1	25963760	772
ENSMUSG00000045467	protein_coding	Ttll13	ENSMUST00000133958	retained_intron		7	1	80246994	1100
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000142251	protein_coding		2	-1	76826542	744
ENSMUSG00000045467	protein_coding	Ttll13	ENSMUST00000205270	protein_coding		7	1	80247388	2723
ENSMUSG00000037326	protein_coding	Capn15	ENSMUST00000041641	protein_coding	principal3	17	-1	25985680	3520
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000137854	protein_coding		2	-1	76841153	609
ENSMUSG00000058207	protein_coding	Serpina3k	ENSMUST00000043058	protein_coding	principal1	12	1	104338486	2057
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000156257	protein_coding		2	-1	76832296	271
ENSMUSG00000034427	protein_coding	Myo15b	ENSMUST00000093911	protein_coding	principal1	11	1	115858406	9340
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000150741	protein_coding		2	-1	76833107	451
ENSMUSG00000025727	protein_coding	A930017K11Rik	ENSMUST00000162431	protein_coding	principal1	17	-1	25952565	2539
ENSMUSG00000034427	protein_coding	Myo15b	ENSMUST00000151507	processed_transcript		11	1	115877516	651
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000151097	protein_coding		2	-1	76838896	459
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000126515	protein_coding		2	-1	76847170	549
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000138542	protein_coding		2	-1	76870611	3406
ENSMUSG00000010453	protein_coding	Kansl3	ENSMUST00000188961	nonsense_mediated_decay		1	-1	36369171	2907
ENSMUSG00000066153	protein_coding	Mup21	ENSMUST00000077719	protein_coding	principal1	4	-1	62150863	677
ENSMUSG00000015806	protein_coding	Qdpr	ENSMUST00000197946	protein_coding		5	-1	45450121	1206
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000139832	processed_transcript		2	-1	76889507	627
ENSMUSG00000115367	lincRNA	Gm33301	ENSMUST00000226809	lincRNA		15	1	40162581	522
ENSMUSG00000109621	lincRNA	Gm45370	ENSMUST00000211274	lincRNA		8	1	26996250	483
ENSMUSG00000010453	protein_coding	Kansl3	ENSMUST00000188528	nonsense_mediated_decay		1	-1	36368041	763
ENSMUSG00000034427	protein_coding	Myo15b	ENSMUST00000222123	protein_coding		11	1	115877534	5154
ENSMUSG00000115367	lincRNA	Gm33301	ENSMUST00000228503	lincRNA		15	1	40162607	1064
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000099980	protein_coding		2	-1	76982455	16891
ENSMUSG00000105649	processed_pseudogene	Gm43494	ENSMUST00000197672	processed_pseudogene		5	-1	137875622	388
ENSMUSG00000010453	protein_coding	Kansl3	ENSMUST00000185621	nonsense_mediated_decay		1	-1	36369155	609
ENSMUSG00000010453	protein_coding	Kansl3	ENSMUST00000187628	protein_coding		1	-1	36368041	336
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000123448	retained_intron		2	-1	76938524	1718
ENSMUSG00000034427	protein_coding	Myo15b	ENSMUST00000125835	protein_coding		11	1	115886436	713
ENSMUSG00000010453	protein_coding	Kansl3	ENSMUST00000185614	retained_intron		1	-1	36369157	2177
ENSMUSG00000010453	protein_coding	Kansl3	ENSMUST00000188957	protein_coding		1	-1	36369102	167
ENSMUSG00000066007	protein_coding	Zfp600	ENSMUST00000092750	protein_coding	principal1	4	1	146157690	4154
ENSMUSG00000040850	protein_coding	Psme4	ENSMUST00000041231	protein_coding	principal1	11	1	30771726	6491
ENSMUSG00000040850	protein_coding	Psme4	ENSMUST00000154757	protein_coding		11	1	30772321	657
ENSMUSG00000066007	protein_coding	Zfp600	ENSMUST00000131932	protein_coding		4	1	146161909	569
ENSMUSG00000079012	protein_coding	Serpina3m	ENSMUST00000168797	protein_coding	principal1	12	1	104387164	1659
ENSMUSG00000040850	protein_coding	Psme4	ENSMUST00000133430	processed_transcript		11	1	30811537	695
ENSMUSG00000066007	protein_coding	Zfp600	ENSMUST00000168483	protein_coding	principal1	4	1	146156824	4244
ENSMUSG00000034951	protein_coding	Cog7	ENSMUST00000205438	protein_coding		7	-1	121981711	3355
ENSMUSG00000079012	protein_coding	Serpina3m	ENSMUST00000101078	protein_coding	principal1	12	1	104338486	1658
ENSMUSG00000045575	protein_coding	Vmn1r233	ENSMUST00000237195	protein_coding	principal1	17	-1	20996464	5317
ENSMUSG00000040850	protein_coding	Psme4	ENSMUST00000142217	processed_transcript		11	1	30830102	579
ENSMUSG00000034951	protein_coding	Cog7	ENSMUST00000057576	protein_coding	principal1	7	-1	121981711	2902
ENSMUSG00000015806	protein_coding	Qdpr	ENSMUST00000117425	protein_coding		5	-1	45448173	1231
ENSMUSG00000040850	protein_coding	Psme4	ENSMUST00000150219	processed_transcript		11	1	30832383	582
ENSMUSG00000034427	protein_coding	Myo15b	ENSMUST00000132447	retained_intron		11	1	115886807	2265
ENSMUSG00000045575	protein_coding	Vmn1r233	ENSMUST00000237629	protein_coding	principal1	17	-1	20996464	4818
ENSMUSG00000015806	protein_coding	Qdpr	ENSMUST00000120867	protein_coding		5	-1	45449965	1234
ENSMUSG00000091157	unprocessed_pseudogene	Serpina3l-ps	ENSMUST00000163975	unprocessed_pseudogene		12	1	104358003	1264
ENSMUSG00000034427	protein_coding	Myo15b	ENSMUST00000141947	retained_intron		11	1	115890239	615
ENSMUSG00000015806	protein_coding	Qdpr	ENSMUST00000118097	protein_coding		5	-1	45450171	1232
ENSMUSG00000040850	protein_coding	Psme4	ENSMUST00000129824	protein_coding		11	1	30852788	576
ENSMUSG00000045575	protein_coding	Vmn1r233	ENSMUST00000056339	protein_coding	principal1	17	-1	20996464	4097
ENSMUSG00000034427	protein_coding	Myo15b	ENSMUST00000167507	protein_coding		11	1	115887601	1785
ENSMUSG00000040850	protein_coding	Psme4	ENSMUST00000155719	processed_transcript		11	1	30865469	452
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000123804	retained_intron		2	-1	76982547	3513
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000140091	protein_coding		2	-1	76982547	2159
ENSMUSG00000034427	protein_coding	Myo15b	ENSMUST00000040703	protein_coding		11	1	115880425	2825
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000147048	retained_intron		2	-1	76982547	2093
ENSMUSG00000034951	protein_coding	Cog7	ENSMUST00000148634	retained_intron		7	-1	121981694	2537
ENSMUSG00000014444	protein_coding	Piezo1	ENSMUST00000156333	protein_coding	alternative2	8	-1	122551329	8219
ENSMUSG00000015806	protein_coding	Qdpr	ENSMUST00000015950	protein_coding	principal1	5	-1	45450236	1380
ENSMUSG00000087072	antisense	Recql5os1	ENSMUST00000134391	antisense		11	1	115925027	396
ENSMUSG00000030159	protein_coding	Clec1b	ENSMUST00000032262	protein_coding	principal3	6	1	129397297	1090
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000177418	retained_intron		3	1	88621138	1883
ENSMUSG00000032977	protein_coding	Fam207a	ENSMUST00000045454	protein_coding	principal1	10	-1	77515785	2394
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000111846	protein_coding	principal2	2	-1	76980182	100404
ENSMUSG00000014444	protein_coding	Piezo1	ENSMUST00000123671	retained_intron		8	-1	122484780	2860
ENSMUSG00000030159	protein_coding	Clec1b	ENSMUST00000112081	protein_coding	alternative2	6	1	129397607	614
ENSMUSG00000099928	antisense	Gm29202	ENSMUST00000191263	antisense		11	1	96005889	422
ENSMUSG00000054469	protein_coding	Lclat1	ENSMUST00000149064	protein_coding		17	1	73107988	784
ENSMUSG00000032977	protein_coding	Fam207a	ENSMUST00000218414	protein_coding		10	-1	77515572	788
ENSMUSG00000030159	protein_coding	Clec1b	ENSMUST00000112079	protein_coding		6	1	129397610	455
ENSMUSG00000015806	protein_coding	Qdpr	ENSMUST00000200259	retained_intron		5	-1	45443596	887
ENSMUSG00000020752	protein_coding	Recql5	ENSMUST00000136774	retained_intron		11	-1	115895136	1772
ENSMUSG00000032977	protein_coding	Fam207a	ENSMUST00000217681	processed_transcript		10	-1	77507315	780
ENSMUSG00000030159	protein_coding	Clec1b	ENSMUST00000133061	retained_intron		6	1	129403550	4347
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000111882	protein_coding	alternative2	2	-1	76982547	101674
ENSMUSG00000032180	protein_coding	Tmed1	ENSMUST00000213316	retained_intron		9	-1	21510187	1454
ENSMUSG00000055003	protein_coding	Lrtm2	ENSMUST00000112756	protein_coding	principal1	6	-1	119330757	3569
ENSMUSG00000015806	protein_coding	Qdpr	ENSMUST00000149290	processed_transcript		5	-1	45444559	561
ENSMUSG00000003379	protein_coding	Cd79a	ENSMUST00000003469	protein_coding	principal1	7	1	24897381	1457
ENSMUSG00000051747	protein_coding	Ttn	ENSMUST00000190813	protein_coding		2	-1	76836814	300
ENSMUSG00000033031	protein_coding	Cip2a	ENSMUST00000117994	protein_coding		16	1	48994185	3977
ENSMUSG00000086354	antisense	Gm13938	ENSMUST00000156809	antisense		2	1	76722776	493
ENSMUSG00000015806	protein_coding	Qdpr	ENSMUST00000154962	protein_coding		5	-1	45450154	530
ENSMUSG00000014444	protein_coding	Piezo1	ENSMUST00000128383	nonsense_mediated_decay		8	-1	122499885	6317
ENSMUSG00000055003	protein_coding	Lrtm2	ENSMUST00000068351	protein_coding	principal1	6	-1	119330766	4001
ENSMUSG00000014444	protein_coding	Piezo1	ENSMUST00000134304	retained_intron		8	-1	122483000	698
ENSMUSG00000015806	protein_coding	Qdpr	ENSMUST00000127562	protein_coding		5	-1	45450138	446
ENSMUSG00000033031	protein_coding	Cip2a	ENSMUST00000125278	processed_transcript		16	1	48994223	439
ENSMUSG00000014444	protein_coding	Piezo1	ENSMUST00000155803	retained_intron		8	-1	122482676	519
ENSMUSG00000055003	protein_coding	Lrtm2	ENSMUST00000124192	protein_coding		6	-1	119329204	438
ENSMUSG00000081127	processed_pseudogene	Gm12677	ENSMUST00000118668	processed_pseudogene		4	-1	44314058	426
ENSMUSG00000055003	protein_coding	Lrtm2	ENSMUST00000168793	protein_coding	principal1	6	-1	119329204	3407
ENSMUSG00000033031	protein_coding	Cip2a	ENSMUST00000127995	retained_intron		16	1	49000843	631
ENSMUSG00000061488	processed_pseudogene	Rpl27a-ps1	ENSMUST00000075382	processed_pseudogene		10	1	61309830	448
ENSMUSG00000014444	protein_coding	Piezo1	ENSMUST00000126553	retained_intron		8	-1	122483869	429
ENSMUSG00000024866	protein_coding	Acy3	ENSMUST00000236224	protein_coding		19	1	3986570	708
ENSMUSG00000014444	protein_coding	Piezo1	ENSMUST00000152596	retained_intron		8	-1	122485624	506
ENSMUSG00000014444	protein_coding	Piezo1	ENSMUST00000148497	nonsense_mediated_decay		8	-1	122498204	3538
ENSMUSG00000054469	protein_coding	Lclat1	ENSMUST00000067545	protein_coding	principal1	17	1	73107994	4467
ENSMUSG00000014444	protein_coding	Piezo1	ENSMUST00000067252	protein_coding	principal2	8	-1	122551329	8216
ENSMUSG00000054469	protein_coding	Lclat1	ENSMUST00000232703	protein_coding		17	1	73126427	1275
ENSMUSG00000032180	protein_coding	Tmed1	ENSMUST00000034698	protein_coding	principal1	9	-1	21510252	1378
ENSMUSG00000083911	processed_pseudogene	Gm4342	ENSMUST00000118982	processed_pseudogene		8	1	123853829	367
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000107510	protein_coding	alternative2	3	1	88621292	4390
ENSMUSG00000034881	protein_coding	Tbxa2r	ENSMUST00000105325	protein_coding	principal1	10	1	81328731	1765
ENSMUSG00000054469	protein_coding	Lclat1	ENSMUST00000131335	processed_transcript		17	1	73162989	726
ENSMUSG00000033031	protein_coding	Cip2a	ENSMUST00000130080	retained_intron		16	1	49008411	3079
ENSMUSG00000117830	processed_pseudogene	Gm50400	ENSMUST00000235625	processed_pseudogene		18	-1	88415040	478
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000170653	protein_coding	alternative2	3	1	88621436	4238
ENSMUSG00000032180	protein_coding	Tmed1	ENSMUST00000214285	nonsense_mediated_decay		9	-1	21510187	1213
ENSMUSG00000033031	protein_coding	Cip2a	ENSMUST00000123975	retained_intron		16	1	49010430	514
ENSMUSG00000034881	protein_coding	Tbxa2r	ENSMUST00000220312	protein_coding	principal1	10	1	81328731	1919
ENSMUSG00000054469	protein_coding	Lclat1	ENSMUST00000134149	processed_transcript		17	1	73204150	795
ENSMUSG00000118352	lincRNA	Gm50401	ENSMUST00000237266	lincRNA		18	1	88609402	801
ENSMUSG00000033031	protein_coding	Cip2a	ENSMUST00000133754	retained_intron		16	1	49013295	629
ENSMUSG00000032180	protein_coding	Tmed1	ENSMUST00000214576	nonsense_mediated_decay		9	-1	21510234	1013
ENSMUSG00000118247	processed_pseudogene	Gm7662	ENSMUST00000235328	processed_pseudogene		18	-1	88658614	623
ENSMUSG00000032180	protein_coding	Tmed1	ENSMUST00000213167	protein_coding		9	-1	21510162	492
ENSMUSG00000033031	protein_coding	Cip2a	ENSMUST00000149004	retained_intron		16	1	49015837	1779
ENSMUSG00000118233	lincRNA	Gm30381	ENSMUST00000236104	lincRNA		19	1	53128684	1119
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176401	retained_intron		3	1	88621460	1072
ENSMUSG00000033031	protein_coding	Cip2a	ENSMUST00000048374	protein_coding	principal1	16	1	48994188	3974
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176400	retained_intron		3	1	88621548	768
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000177303	protein_coding	alternative2	3	1	88621555	3000
ENSMUSG00000081966	processed_pseudogene	Gm13900	ENSMUST00000119402	processed_pseudogene		2	1	107000748	498
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176307	protein_coding		3	1	88622459	424
ENSMUSG00000117544	processed_pseudogene	Rpsa-ps6	ENSMUST00000234730	processed_pseudogene		17	-1	25549489	587
ENSMUSG00000118003	processed_pseudogene	Gm9618	ENSMUST00000236466	processed_pseudogene		19	-1	53135325	854
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000175911	protein_coding		3	1	88622921	2030
ENSMUSG00000024866	protein_coding	Acy3	ENSMUST00000236510	protein_coding	principal1	19	1	3986570	1284
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176243	protein_coding		3	1	88623354	672
ENSMUSG00000024866	protein_coding	Acy3	ENSMUST00000237910	protein_coding		19	1	3986571	694
ENSMUSG00000054237	protein_coding	Fra10ac1	ENSMUST00000067167	protein_coding	principal1	19	-1	38224138	1402
ENSMUSG00000024866	protein_coding	Acy3	ENSMUST00000235612	protein_coding	principal1	19	1	3986583	1142
ENSMUSG00000024866	protein_coding	Acy3	ENSMUST00000236739	processed_transcript		19	1	3986592	734
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176316	protein_coding		3	1	88629442	463
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000085222	protein_coding	principal2	7	1	64153835	5711
ENSMUSG00000106943	processed_transcript	Dancr	ENSMUST00000132389	retained_intron		5	1	74093060	2347
ENSMUSG00000054237	protein_coding	Fra10ac1	ENSMUST00000238007	retained_intron		19	-1	38224156	1010
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000177120	retained_intron		3	1	88629469	431
ENSMUSG00000054237	protein_coding	Fra10ac1	ENSMUST00000238154	retained_intron		19	-1	38224138	1884
ENSMUSG00000024866	protein_coding	Acy3	ENSMUST00000054030	protein_coding	principal1	19	1	3986661	1505
ENSMUSG00000026609	protein_coding	Ush2a	ENSMUST00000142189	retained_intron		1	1	188262023	1236
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176879	protein_coding		3	1	88629473	442
ENSMUSG00000024866	protein_coding	Acy3	ENSMUST00000235592	retained_intron		19	1	3987203	710
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000175745	protein_coding		3	1	88629571	392
ENSMUSG00000101690	unprocessed_pseudogene	Gm28390	ENSMUST00000185212	unprocessed_pseudogene		Y	-1	11764634	700
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176528	processed_transcript		3	1	88631911	735
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176079	retained_intron		3	1	88632196	475
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176123	retained_intron		3	1	88632733	559
ENSMUSG00000106943	processed_transcript	Dancr	ENSMUST00000120364	lincRNA		5	1	74093077	575
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000177091	retained_intron		3	1	88632918	3186
ENSMUSG00000026609	protein_coding	Ush2a	ENSMUST00000124358	retained_intron		1	1	188262035	5126
ENSMUSG00000029561	protein_coding	Oasl2	ENSMUST00000031542	protein_coding	principal1	5	1	114896936	3123
ENSMUSG00000106943	processed_transcript	Dancr	ENSMUST00000117249	retained_intron		5	1	74093083	1036
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176301	retained_intron		3	1	88634323	432
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000171042	protein_coding		18	1	7868832	2205
ENSMUSG00000003500	protein_coding	Impdh1	ENSMUST00000162739	protein_coding	alternative2	6	-1	29216331	2471
ENSMUSG00000106943	processed_transcript	Dancr	ENSMUST00000066220	processed_transcript		5	1	74093060	2346
ENSMUSG00000030873	protein_coding	Scnn1b	ENSMUST00000033161	protein_coding	principal1	7	1	121865038	2478
ENSMUSG00000107255	TEC	Gm43416	ENSMUST00000201916	TEC		5	-1	74093151	1015
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000166378	protein_coding		18	1	7868845	442
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000177099	retained_intron		3	1	88642426	702
ENSMUSG00000029561	protein_coding	Oasl2	ENSMUST00000146072	protein_coding		5	1	114897001	832
ENSMUSG00000043485	protein_coding	Krt34	ENSMUST00000056362	protein_coding	principal1	11	-1	100041554	1609
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205348	nonsense_mediated_decay		7	1	64153845	2007
ENSMUSG00000028059	protein_coding	Arhgef2	ENSMUST00000176272	processed_transcript		3	1	88643932	532
ENSMUSG00000030873	protein_coding	Scnn1b	ENSMUST00000205520	nonsense_mediated_decay		7	1	121865077	2591
ENSMUSG00000029561	protein_coding	Oasl2	ENSMUST00000150361	protein_coding		5	1	114897030	632
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000034012	protein_coding	principal1	8	-1	40511754	2615
ENSMUSG00000117445	lincRNA	Gm50026	ENSMUST00000235087	lincRNA		17	-1	25561213	455
ENSMUSG00000030873	protein_coding	Scnn1b	ENSMUST00000206079	protein_coding		7	1	121899228	437
ENSMUSG00000029561	protein_coding	Oasl2	ENSMUST00000201919	retained_intron		5	1	114897532	819
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000206277	protein_coding	alternative2	7	1	64153845	5076
ENSMUSG00000029561	protein_coding	Oasl2	ENSMUST00000137828	retained_intron		5	1	114897576	829
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000206314	protein_coding		7	1	64153928	2323
ENSMUSG00000003500	protein_coding	Impdh1	ENSMUST00000160878	protein_coding	alternative2	6	-1	29212249	2314
ENSMUSG00000013415	protein_coding	Igf2bp1	ENSMUST00000013559	protein_coding	principal1	11	-1	96005940	8378
ENSMUSG00000093390	antisense	Gm20652	ENSMUST00000177314	antisense		3	-1	88621061	383
ENSMUSG00000029561	protein_coding	Oasl2	ENSMUST00000144064	nonsense_mediated_decay		5	1	114897742	2020
ENSMUSG00000117887	processed_pseudogene	Gm50404	ENSMUST00000236521	processed_pseudogene		18	1	88827050	442
ENSMUSG00000117948	processed_pseudogene	Gm6409	ENSMUST00000237769	processed_pseudogene		18	-1	88832477	619
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000146280	processed_transcript		8	-1	40511722	726
ENSMUSG00000029561	protein_coding	Oasl2	ENSMUST00000124716	protein_coding		5	1	114901353	881
ENSMUSG00000003500	protein_coding	Impdh1	ENSMUST00000078155	protein_coding	principal2	6	-1	29212297	2437
ENSMUSG00000029561	protein_coding	Oasl2	ENSMUST00000201445	retained_intron		5	1	114901834	2108
ENSMUSG00000041654	protein_coding	Slc39a11	ENSMUST00000071539	protein_coding	principal3	11	-1	113565756	2664
ENSMUSG00000029561	protein_coding	Oasl2	ENSMUST00000129707	retained_intron		5	1	114904430	708
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000135269	protein_coding		8	-1	40511718	2461
ENSMUSG00000103191	TEC	Gm37646	ENSMUST00000191756	TEC		3	1	51423613	111
ENSMUSG00000044897	protein_coding	Olfr821	ENSMUST00000205181	protein_coding	principal1	10	1	130030348	1993
ENSMUSG00000044897	protein_coding	Olfr821	ENSMUST00000214177	protein_coding	principal1	10	1	130030348	1929
ENSMUSG00000041654	protein_coding	Slc39a11	ENSMUST00000042657	protein_coding	alternative2	11	-1	113565768	2781
ENSMUSG00000056153	protein_coding	Socs6	ENSMUST00000155169	processed_transcript		18	-1	88758491	715
ENSMUSG00000003500	protein_coding	Impdh1	ENSMUST00000159124	protein_coding	principal2	6	-1	29216364	2600
ENSMUSG00000045022	protein_coding	H2bl1	ENSMUST00000054425	protein_coding	principal1	13	-1	98984565	481
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000144970	retained_intron		8	-1	40511718	3888
ENSMUSG00000013415	protein_coding	Igf2bp1	ENSMUST00000141515	processed_transcript		11	-1	95982608	1108
ENSMUSG00000044897	protein_coding	Olfr821	ENSMUST00000054364	protein_coding	principal1	10	1	130033628	933
ENSMUSG00000114203	lincRNA	Gm35279	ENSMUST00000224873	lincRNA		13	1	98994151	960
ENSMUSG00000041654	protein_coding	Slc39a11	ENSMUST00000149034	protein_coding		11	-1	113565779	654
ENSMUSG00000114414	lincRNA	A930014D07Rik	ENSMUST00000223781	lincRNA		13	1	99007099	974
ENSMUSG00000058251	protein_coding	Olfr822	ENSMUST00000216879	protein_coding	principal1	10	1	130071210	2663
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000149992	protein_coding	principal1	8	-1	40511304	2982
ENSMUSG00000114283	processed_pseudogene	Gm47057	ENSMUST00000224351	processed_pseudogene		13	-1	99034848	540
ENSMUSG00000013415	protein_coding	Igf2bp1	ENSMUST00000146586	processed_transcript		11	-1	95982611	599
ENSMUSG00000029790	protein_coding	Cep41	ENSMUST00000031810	protein_coding	principal1	6	-1	30693749	3447
ENSMUSG00000013415	protein_coding	Igf2bp1	ENSMUST00000152896	processed_transcript		11	-1	95982594	576
ENSMUSG00000058251	protein_coding	Olfr822	ENSMUST00000080460	protein_coding	principal1	10	1	130074409	942
ENSMUSG00000013415	protein_coding	Igf2bp1	ENSMUST00000138513	processed_transcript		11	-1	95967835	690
ENSMUSG00000108253	unprocessed_pseudogene	Olfr1542-ps1	ENSMUST00000204175	unprocessed_pseudogene		10	-1	130093844	752
ENSMUSG00000003500	protein_coding	Impdh1	ENSMUST00000162099	protein_coding	principal2	6	-1	29216342	2580
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000132032	protein_coding	principal1	8	-1	40515847	2542
ENSMUSG00000041654	protein_coding	Slc39a11	ENSMUST00000106633	protein_coding	alternative2	11	-1	113565759	2688
ENSMUSG00000103376	TEC	Gm37179	ENSMUST00000194862	TEC		11	-1	96007155	823
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000128237	processed_transcript		8	-1	40515835	484
ENSMUSG00000038058	protein_coding	Nod1	ENSMUST00000168172	protein_coding	principal1	6	-1	54971661	4064
ENSMUSG00000056153	protein_coding	Socs6	ENSMUST00000136173	processed_transcript		18	-1	88894339	1729
ENSMUSG00000026070	protein_coding	Il18r1	ENSMUST00000167723	protein_coding		1	1	40465552	1919
ENSMUSG00000056153	protein_coding	Socs6	ENSMUST00000237549	processed_transcript		18	-1	88894259	3417
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000139558	processed_transcript		8	-1	40511304	406
ENSMUSG00000003500	protein_coding	Impdh1	ENSMUST00000162242	protein_coding		6	-1	29203420	1237
ENSMUSG00000038058	protein_coding	Nod1	ENSMUST00000060655	protein_coding	principal1	6	-1	54972612	4315
ENSMUSG00000085311	antisense	Gm15445	ENSMUST00000146700	antisense		1	1	135152963	603
ENSMUSG00000099752	antisense	Gm29018	ENSMUST00000188707	antisense		1	1	59014224	925
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000142455	processed_transcript		8	-1	40501072	679
ENSMUSG00000003500	protein_coding	Impdh1	ENSMUST00000161654	retained_intron		6	-1	29206439	520
ENSMUSG00000041654	protein_coding	Slc39a11	ENSMUST00000146031	protein_coding		11	-1	113650079	485
ENSMUSG00000099752	antisense	Gm29018	ENSMUST00000191356	antisense		1	1	59036055	313
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000132200	processed_transcript		8	-1	40507585	312
ENSMUSG00000038058	protein_coding	Nod1	ENSMUST00000203916	processed_transcript		6	-1	54928098	546
ENSMUSG00000003500	protein_coding	Impdh1	ENSMUST00000162215	protein_coding		6	-1	29216277	901
ENSMUSG00000038058	protein_coding	Nod1	ENSMUST00000203076	protein_coding		6	-1	54943453	773
ENSMUSG00000041654	protein_coding	Slc39a11	ENSMUST00000123153	processed_transcript		11	-1	113650070	351
ENSMUSG00000029790	protein_coding	Cep41	ENSMUST00000140211	nonsense_mediated_decay		6	-1	30693693	3522
ENSMUSG00000047383	lincRNA	AC169382.1	ENSMUST00000054653	lincRNA		1	-1	59003539	878
ENSMUSG00000003500	protein_coding	Impdh1	ENSMUST00000160613	retained_intron		6	-1	29209612	664
ENSMUSG00000031601	protein_coding	Cnot7	ENSMUST00000132740	retained_intron		8	-1	40507668	840
ENSMUSG00000029790	protein_coding	Cep41	ENSMUST00000115131	protein_coding		6	-1	30693695	2256
ENSMUSG00000056153	protein_coding	Socs6	ENSMUST00000070116	protein_coding	principal1	18	-1	88894322	6036
ENSMUSG00000003500	protein_coding	Impdh1	ENSMUST00000160749	protein_coding		6	-1	29215929	355
ENSMUSG00000038058	protein_coding	Nod1	ENSMUST00000205242	processed_transcript		6	-1	54939851	396
ENSMUSG00000041654	protein_coding	Slc39a11	ENSMUST00000125890	protein_coding		11	-1	113650071	742
ENSMUSG00000026070	protein_coding	Il18r1	ENSMUST00000193391	protein_coding		1	1	40465676	1738
ENSMUSG00000041654	protein_coding	Slc39a11	ENSMUST00000136392	protein_coding		11	-1	113650070	362
ENSMUSG00000038058	protein_coding	Nod1	ENSMUST00000203837	protein_coding		6	-1	54964688	574
ENSMUSG00000029790	protein_coding	Cep41	ENSMUST00000132763	processed_transcript		6	-1	30669355	2393
ENSMUSG00000026070	protein_coding	Il18r1	ENSMUST00000193793	protein_coding		1	1	40465970	1652
ENSMUSG00000083339	processed_pseudogene	Gm11693	ENSMUST00000119625	processed_pseudogene		11	1	113678530	565
ENSMUSG00000017550	protein_coding	Atad5	ENSMUST00000108239	protein_coding	alternative2	11	1	80089400	7266
ENSMUSG00000109603	lincRNA	Gm32389	ENSMUST00000209312	lincRNA		8	1	27008467	1621
ENSMUSG00000020752	protein_coding	Recql5	ENSMUST00000021097	protein_coding	principal1	11	-1	115933477	3971
ENSMUSG00000029790	protein_coding	Cep41	ENSMUST00000153107	retained_intron		6	-1	30656809	650
ENSMUSG00000056153	protein_coding	Socs6	ENSMUST00000123826	protein_coding	principal1	18	-1	88894216	2921
ENSMUSG00000110081	processed_pseudogene	Gm19164	ENSMUST00000210667	processed_pseudogene		8	-1	27020093	640
ENSMUSG00000035683	protein_coding	Melk	ENSMUST00000045607	protein_coding	principal1	4	1	44300876	2955
ENSMUSG00000029790	protein_coding	Cep41	ENSMUST00000146951	retained_intron		6	-1	30661369	695
ENSMUSG00000047904	protein_coding	Sstr2	ENSMUST00000146390	protein_coding	principal1	11	1	113619342	2143
ENSMUSG00000035683	protein_coding	Melk	ENSMUST00000137703	protein_coding		4	1	44302667	696
ENSMUSG00000035683	protein_coding	Melk	ENSMUST00000125708	protein_coding		4	1	44303568	442
ENSMUSG00000029790	protein_coding	Cep41	ENSMUST00000140252	protein_coding		6	-1	30693088	413
ENSMUSG00000029790	protein_coding	Cep41	ENSMUST00000169422	protein_coding		6	-1	30693676	438
ENSMUSG00000056153	protein_coding	Socs6	ENSMUST00000125362	protein_coding	principal1	18	-1	88894352	2814
ENSMUSG00000024235	protein_coding	Map3k8	ENSMUST00000025078	protein_coding	principal1	18	-1	4353015	2569
ENSMUSG00000047904	protein_coding	Sstr2	ENSMUST00000106630	protein_coding		11	1	113619476	1537
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000074919	protein_coding	alternative2	18	1	7868850	3070
ENSMUSG00000029790	protein_coding	Cep41	ENSMUST00000133373	protein_coding		6	-1	30680533	386
ENSMUSG00000056153	protein_coding	Socs6	ENSMUST00000145120	protein_coding		18	-1	88894310	1004
ENSMUSG00000035683	protein_coding	Melk	ENSMUST00000137759	processed_transcript		4	1	44303568	648
ENSMUSG00000056153	protein_coding	Socs6	ENSMUST00000236108	protein_coding		18	-1	88887337	453
ENSMUSG00000029790	protein_coding	Cep41	ENSMUST00000115130	protein_coding		6	-1	30693700	485
ENSMUSG00000047904	protein_coding	Sstr2	ENSMUST00000067591	protein_coding		11	1	113624257	1041
ENSMUSG00000056153	protein_coding	Socs6	ENSMUST00000147313	protein_coding		18	-1	88927481	370
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000171486	protein_coding		18	1	7869066	1608
ENSMUSG00000108798	processed_pseudogene	Gm9521	ENSMUST00000206656	processed_pseudogene		7	1	18229777	1516
ENSMUSG00000118089	processed_pseudogene	Gm50406	ENSMUST00000236358	processed_pseudogene		18	-1	88915241	472
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000170932	protein_coding		18	1	7869196	384
ENSMUSG00000017550	protein_coding	Atad5	ENSMUST00000151815	processed_transcript		11	1	80101884	4572
ENSMUSG00000026070	protein_coding	Il18r1	ENSMUST00000195684	protein_coding	principal1	1	1	40466006	2850
ENSMUSG00000108184	TEC	Gm44198	ENSMUST00000203063	TEC		6	1	87533407	2636
ENSMUSG00000017550	protein_coding	Atad5	ENSMUST00000154168	retained_intron		11	1	80103003	550
ENSMUSG00000024235	protein_coding	Map3k8	ENSMUST00000173930	nonsense_mediated_decay		18	-1	4352957	2236
ENSMUSG00000106735	TEC	A330058E17Rik	ENSMUST00000200757	TEC		5	-1	74176050	3890
ENSMUSG00000024235	protein_coding	Map3k8	ENSMUST00000105472	processed_transcript		18	-1	4336295	1626
ENSMUSG00000054459	protein_coding	Vsnl1	ENSMUST00000220506	protein_coding	principal1	12	-1	11435640	1699
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000075812	protein_coding	principal4	5	1	33820725	7142
ENSMUSG00000024235	protein_coding	Map3k8	ENSMUST00000173708	retained_intron		18	-1	4335048	652
ENSMUSG00000024235	protein_coding	Map3k8	ENSMUST00000172805	retained_intron		18	-1	4353015	2048
ENSMUSG00000017550	protein_coding	Atad5	ENSMUST00000017694	protein_coding	principal2	11	1	80089400	7272
ENSMUSG00000054459	protein_coding	Vsnl1	ENSMUST00000072299	protein_coding	principal1	12	-1	11436613	1903
ENSMUSG00000026070	protein_coding	Il18r1	ENSMUST00000087983	protein_coding	principal1	1	1	40466006	2826
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205960	retained_intron		7	1	64185381	1992
ENSMUSG00000024653	protein_coding	Scgb1a1	ENSMUST00000025554	protein_coding	principal1	19	-1	9087958	476
ENSMUSG00000026070	protein_coding	Il18r1	ENSMUST00000108044	protein_coding	principal1	1	1	40466006	4158
ENSMUSG00000083860	processed_pseudogene	Gm13313	ENSMUST00000118938	processed_pseudogene		2	1	15127600	1084
ENSMUSG00000102698	TEC	Gm37777	ENSMUST00000195546	TEC		1	1	140266487	3366
ENSMUSG00000108764	processed_pseudogene	Gm2926	ENSMUST00000205625	processed_pseudogene		7	1	98455260	239
ENSMUSG00000102368	antisense	4930590L20Rik	ENSMUST00000193820	antisense		1	-1	140656404	553
ENSMUSG00000020752	protein_coding	Recql5	ENSMUST00000140174	nonsense_mediated_decay		11	-1	115933477	4410
ENSMUSG00000026426	protein_coding	Arl8a	ENSMUST00000027684	protein_coding	principal1	1	1	135146824	1713
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205728	processed_transcript		7	1	64185459	372
ENSMUSG00000052726	protein_coding	Kcnt2	ENSMUST00000239229	protein_coding		1	1	140246158	362
ENSMUSG00000020752	protein_coding	Recql5	ENSMUST00000131578	nonsense_mediated_decay		11	-1	115927386	1154
ENSMUSG00000026426	protein_coding	Arl8a	ENSMUST00000125774	protein_coding		1	1	135147669	1495
ENSMUSG00000091888	protein_coding	Vmn2r80	ENSMUST00000165834	protein_coding	principal1	10	1	79148769	2718
ENSMUSG00000049409	protein_coding	Prokr1	ENSMUST00000204682	protein_coding	principal1	6	-1	87590743	4230
ENSMUSG00000020752	protein_coding	Recql5	ENSMUST00000144824	retained_intron		11	-1	115933477	2786
ENSMUSG00000026426	protein_coding	Arl8a	ENSMUST00000123344	retained_intron		1	1	135152082	664
ENSMUSG00000020752	protein_coding	Recql5	ENSMUST00000147172	processed_transcript		11	-1	115907253	357
ENSMUSG00000020752	protein_coding	Recql5	ENSMUST00000134208	nonsense_mediated_decay		11	-1	115933477	2851
ENSMUSG00000026426	protein_coding	Arl8a	ENSMUST00000141177	retained_intron		1	1	135154182	472
ENSMUSG00000020752	protein_coding	Recql5	ENSMUST00000156776	retained_intron		11	-1	115927554	302
ENSMUSG00000087064	antisense	Sap30bpos	ENSMUST00000132264	antisense		11	-1	115952105	2352
ENSMUSG00000028389	protein_coding	Zfp37	ENSMUST00000068822	protein_coding	principal2	4	-1	62208446	3494
ENSMUSG00000096747	protein_coding	Olfr823	ENSMUST00000213145	protein_coding	principal1	10	-1	130115383	1431
ENSMUSG00000031825	protein_coding	Crispld2	ENSMUST00000132583	protein_coding	principal3	8	1	119992438	4182
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205434	retained_intron		7	1	64185550	2765
ENSMUSG00000049409	protein_coding	Prokr1	ENSMUST00000050887	protein_coding	principal1	6	-1	87590720	4075
ENSMUSG00000096747	protein_coding	Olfr823	ENSMUST00000081469	protein_coding	principal1	10	-1	130112788	948
ENSMUSG00000079143	antisense	Atxn7l1os1	ENSMUST00000155877	antisense		12	-1	33228854	1836
ENSMUSG00000049409	protein_coding	Prokr1	ENSMUST00000203636	protein_coding		6	-1	87590719	607
ENSMUSG00000110521	unprocessed_pseudogene	Olfr856-ps1	ENSMUST00000212177	unprocessed_pseudogene		9	-1	19658647	948
ENSMUSG00000028389	protein_coding	Zfp37	ENSMUST00000222748	protein_coding	alternative2	4	-1	62208202	2564
ENSMUSG00000031825	protein_coding	Crispld2	ENSMUST00000034282	protein_coding	alternative2	8	1	119992508	2898
ENSMUSG00000028389	protein_coding	Zfp37	ENSMUST00000222050	protein_coding	alternative2	4	-1	62208430	2017
ENSMUSG00000098216	processed_pseudogene	Gm5181	ENSMUST00000183140	processed_pseudogene		10	1	130120239	971
ENSMUSG00000028389	protein_coding	Zfp37	ENSMUST00000220873	protein_coding	alternative2	4	-1	62207889	1985
ENSMUSG00000085664	antisense	Atxn7l1os2	ENSMUST00000138617	antisense		12	-1	33394760	2019
ENSMUSG00000031825	protein_coding	Crispld2	ENSMUST00000108972	protein_coding	principal3	8	1	120002726	2928
ENSMUSG00000028389	protein_coding	Zfp37	ENSMUST00000221329	protein_coding	alternative2	4	-1	62208361	1776
ENSMUSG00000028389	protein_coding	Zfp37	ENSMUST00000129511	protein_coding		4	-1	62208361	1691
ENSMUSG00000074003	protein_coding	Gucy2d	ENSMUST00000206435	protein_coding	principal1	7	1	98440416	3634
ENSMUSG00000028389	protein_coding	Zfp37	ENSMUST00000212325	protein_coding		4	-1	62231047	521
ENSMUSG00000110610	processed_pseudogene	Gm7769	ENSMUST00000212900	processed_pseudogene		9	1	19690619	933
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000206263	protein_coding	alternative2	7	1	64185552	5493
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000114397	protein_coding		5	1	33820744	5738
ENSMUSG00000074003	protein_coding	Gucy2d	ENSMUST00000205350	protein_coding		7	1	98467694	970
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000206107	protein_coding		7	1	64185553	653
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000155880	protein_coding		5	1	33820829	753
ENSMUSG00000031825	protein_coding	Crispld2	ENSMUST00000151629	processed_transcript		8	1	120013208	467
ENSMUSG00000074003	protein_coding	Gucy2d	ENSMUST00000206524	processed_transcript		7	1	98471533	602
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000238905	protein_coding	alternative2	6	1	119236526	5803
ENSMUSG00000031825	protein_coding	Crispld2	ENSMUST00000144801	retained_intron		8	1	120030792	748
ENSMUSG00000074003	protein_coding	Gucy2d	ENSMUST00000098274	protein_coding		7	1	98443421	3537
ENSMUSG00000095804	protein_coding	Olfr824	ENSMUST00000214192	protein_coding	principal1	10	-1	130130000	3862
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000114399	protein_coding		5	1	33843112	7786
ENSMUSG00000108508	processed_pseudogene	Gm44978	ENSMUST00000206635	processed_pseudogene		7	-1	98465446	317
ENSMUSG00000095804	protein_coding	Olfr824	ENSMUST00000215217	protein_coding	principal1	10	-1	130129883	3619
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000167020	protein_coding	principal3	18	1	7869197	5208
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205731	protein_coding		7	1	64185555	2575
ENSMUSG00000039294	protein_coding	Cybc1	ENSMUST00000106115	protein_coding	principal1	11	-1	121229305	2239
ENSMUSG00000006179	protein_coding	Prss16	ENSMUST00000006341	protein_coding	principal1	13	-1	22009741	2155
ENSMUSG00000095804	protein_coding	Olfr824	ENSMUST00000074161	protein_coding	principal1	10	-1	130127055	948
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000165572	retained_intron		18	1	7869241	654
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000206706	protein_coding		7	1	64185584	2350
ENSMUSG00000006179	protein_coding	Prss16	ENSMUST00000150547	protein_coding		13	-1	22006412	1159
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205690	protein_coding		7	1	64185601	441
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000092112	protein_coding	alternative2	18	1	7869493	3094
ENSMUSG00000006179	protein_coding	Prss16	ENSMUST00000129665	processed_transcript		13	-1	22005222	783
ENSMUSG00000049907	protein_coding	Rasl11b	ENSMUST00000051937	protein_coding	principal1	5	1	74195286	1812
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000206049	protein_coding		7	1	64199262	346
ENSMUSG00000063273	protein_coding	Naa15	ENSMUST00000193266	protein_coding		3	1	51415148	7480
ENSMUSG00000002384	protein_coding	Bmp8b	ENSMUST00000002457	protein_coding	principal1	4	1	123105165	2940
ENSMUSG00000049907	protein_coding	Rasl11b	ENSMUST00000183995	retained_intron		5	1	74195445	334
ENSMUSG00000049907	protein_coding	Rasl11b	ENSMUST00000201837	retained_intron		5	1	74197891	1582
ENSMUSG00000039294	protein_coding	Cybc1	ENSMUST00000038709	protein_coding	principal1	11	-1	121229309	2417
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205684	protein_coding		7	1	64203062	123
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000172018	protein_coding	alternative2	18	1	7869501	1965
ENSMUSG00000117777	processed_pseudogene	Gm50267	ENSMUST00000235800	processed_pseudogene		18	1	88938146	150
ENSMUSG00000063273	protein_coding	Naa15	ENSMUST00000192523	processed_transcript		3	1	51416296	629
ENSMUSG00000006179	protein_coding	Prss16	ENSMUST00000223857	retained_intron		13	-1	22009742	3145
ENSMUSG00000006179	protein_coding	Prss16	ENSMUST00000130585	processed_transcript		13	-1	22009742	618
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000206453	processed_transcript		7	1	64203062	366
ENSMUSG00000063273	protein_coding	Naa15	ENSMUST00000192419	protein_coding		3	1	51416614	637
ENSMUSG00000063273	protein_coding	Naa15	ENSMUST00000195430	retained_intron		3	1	51440917	2975
ENSMUSG00000063273	protein_coding	Naa15	ENSMUST00000192197	protein_coding		3	1	51441906	712
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205610	retained_intron		7	1	64210023	529
ENSMUSG00000108118	lincRNA	Gm34312	ENSMUST00000204650	lincRNA		6	1	87597747	1092
ENSMUSG00000026424	protein_coding	Gpr37l1	ENSMUST00000027682	protein_coding	principal1	1	-1	135167681	2269
ENSMUSG00000044906	protein_coding	4930503L19Rik	ENSMUST00000067556	protein_coding	principal2	18	-1	70472480	2291
ENSMUSG00000072295	protein_coding	C2cd6	ENSMUST00000238601	protein_coding	alternative2	1	-1	59094893	2355
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000168446	protein_coding		18	1	7869530	713
ENSMUSG00000063273	protein_coding	Naa15	ENSMUST00000193694	retained_intron		3	1	51459747	667
ENSMUSG00000114139	unprocessed_pseudogene	Gm20336	ENSMUST00000222057	unprocessed_pseudogene		12	-1	22833361	1283
ENSMUSG00000072295	protein_coding	C2cd6	ENSMUST00000238949	protein_coding	alternative2	1	-1	59094893	7029
ENSMUSG00000002384	protein_coding	Bmp8b	ENSMUST00000151850	processed_transcript		4	1	123119324	1326
ENSMUSG00000114119	processed_pseudogene	Gm48039	ENSMUST00000221267	processed_pseudogene		12	1	22877247	108
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205994	protein_coding		7	1	64210909	286
ENSMUSG00000063273	protein_coding	Naa15	ENSMUST00000194685	retained_intron		3	1	51460740	2319
ENSMUSG00000075023	protein_coding	Accsl	ENSMUST00000099690	protein_coding	principal1	2	-1	93869157	2224
ENSMUSG00000039294	protein_coding	Cybc1	ENSMUST00000133535	retained_intron		11	-1	121228786	2358
ENSMUSG00000113060	processed_pseudogene	Gm48041	ENSMUST00000220571	processed_pseudogene		12	-1	22882342	120
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000206740	retained_intron		7	1	64219875	3349
ENSMUSG00000063273	protein_coding	Naa15	ENSMUST00000193267	retained_intron		3	1	51469146	3073
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000166062	protein_coding		18	1	7869716	1285
ENSMUSG00000113876	processed_pseudogene	Gm48042	ENSMUST00000221698	processed_pseudogene		12	-1	22906163	126
ENSMUSG00000076438	protein_coding	Oxct2b	ENSMUST00000102648	protein_coding	principal1	4	1	123116266	1735
ENSMUSG00000039294	protein_coding	Cybc1	ENSMUST00000149351	retained_intron		11	-1	121227382	742
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000169010	protein_coding		18	1	7869737	687
ENSMUSG00000094678	protein_coding	Olfr857	ENSMUST00000217450	protein_coding	alternative2	9	1	19709433	2271
ENSMUSG00000039294	protein_coding	Cybc1	ENSMUST00000137299	protein_coding		11	-1	121229095	837
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000165854	protein_coding		18	1	7871712	886
ENSMUSG00000075023	protein_coding	Accsl	ENSMUST00000132722	protein_coding		2	-1	93857020	616
ENSMUSG00000044906	protein_coding	4930503L19Rik	ENSMUST00000211817	protein_coding		18	-1	70469754	913
ENSMUSG00000094678	protein_coding	Olfr857	ENSMUST00000212013	protein_coding	principal2	9	1	19709433	2306
ENSMUSG00000044906	protein_coding	4930503L19Rik	ENSMUST00000212074	protein_coding		18	-1	70469754	1210
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000170854	protein_coding		18	1	7905475	724
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000139845	nonsense_mediated_decay		5	1	33843112	7153
ENSMUSG00000039294	protein_coding	Cybc1	ENSMUST00000169393	protein_coding		11	-1	121229235	603
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000206000	retained_intron		7	1	64226581	3068
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000137191	nonsense_mediated_decay		5	1	33843112	7020
ENSMUSG00000094678	protein_coding	Olfr857	ENSMUST00000077023	protein_coding	principal2	9	1	19712829	930
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000167057	retained_intron		18	1	7910601	560
ENSMUSG00000072295	protein_coding	C2cd6	ENSMUST00000097080	protein_coding	principal2	1	-1	59094900	2131
ENSMUSG00000063273	protein_coding	Naa15	ENSMUST00000029303	protein_coding	principal1	3	1	51416016	6090
ENSMUSG00000075023	protein_coding	Accsl	ENSMUST00000151579	processed_transcript		2	-1	93856732	527
ENSMUSG00000044906	protein_coding	4930503L19Rik	ENSMUST00000212982	protein_coding	alternative2	18	-1	70469754	1415
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205939	processed_transcript		7	1	64226948	534
ENSMUSG00000026791	protein_coding	Slc2a8	ENSMUST00000191777	retained_intron		2	-1	32982068	3120
ENSMUSG00000044906	protein_coding	4930503L19Rik	ENSMUST00000212155	protein_coding	alternative2	18	-1	70469754	1585
ENSMUSG00000028932	protein_coding	Psmc2	ENSMUST00000030769	protein_coding	principal1	5	1	21785283	1785
ENSMUSG00000024283	protein_coding	Wac	ENSMUST00000167542	protein_coding		18	1	7910619	634
ENSMUSG00000082066	processed_pseudogene	Gm13904	ENSMUST00000121901	processed_pseudogene		2	1	107010938	837
ENSMUSG00000075023	protein_coding	Accsl	ENSMUST00000141561	processed_transcript		2	-1	93864816	672
ENSMUSG00000028932	protein_coding	Psmc2	ENSMUST00000132720	retained_intron		5	1	21794103	3466
ENSMUSG00000112200	processed_pseudogene	Gm19161	ENSMUST00000217958	processed_pseudogene		10	-1	9749159	737
ENSMUSG00000044906	protein_coding	4930503L19Rik	ENSMUST00000212539	nonsense_mediated_decay		18	-1	70472355	1715
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000058096	protein_coding	alternative2	5	1	33843141	4633
ENSMUSG00000075023	protein_coding	Accsl	ENSMUST00000129248	processed_transcript		2	-1	93869157	498
ENSMUSG00000072295	protein_coding	C2cd6	ENSMUST00000149784	processed_transcript		1	-1	59084523	381
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000205466	retained_intron		7	1	64244811	722
ENSMUSG00000039294	protein_coding	Cybc1	ENSMUST00000147490	protein_coding		11	-1	121229322	717
ENSMUSG00000020755	protein_coding	Sap30bp	ENSMUST00000140991	protein_coding	principal1	11	1	115933282	3654
ENSMUSG00000044906	protein_coding	4930503L19Rik	ENSMUST00000237800	retained_intron		18	-1	70472504	4393
ENSMUSG00000028932	protein_coding	Psmc2	ENSMUST00000239497	protein_coding		5	1	21785283	1775
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000077456	protein_coding		12	1	33147693	1624
ENSMUSG00000099799	lincRNA	Gm28260	ENSMUST00000187337	lincRNA		Y	-1	35461685	1499
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000141416	nonsense_mediated_decay		5	1	33843196	4473
ENSMUSG00000039294	protein_coding	Cybc1	ENSMUST00000156214	processed_transcript		11	-1	121229223	587
ENSMUSG00000075023	protein_coding	Accsl	ENSMUST00000143033	protein_coding		2	-1	93869072	655
ENSMUSG00000026672	protein_coding	Optn	ENSMUST00000114996	protein_coding	principal1	2	-1	5064045	2614
ENSMUSG00000080930	processed_pseudogene	Gm13367	ENSMUST00000119955	processed_pseudogene		2	1	15342625	796
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000190015	retained_intron		6	1	119236527	3229
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000206848	protein_coding		7	1	64245024	795
ENSMUSG00000083631	processed_pseudogene	Gm13366	ENSMUST00000122198	processed_pseudogene		2	1	15385618	970
ENSMUSG00000111726	lincRNA	Gm40513	ENSMUST00000217258	lincRNA		9	-1	41890604	411
ENSMUSG00000075023	protein_coding	Accsl	ENSMUST00000133562	protein_coding		2	-1	93869082	623
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000186622	protein_coding	alternative2	6	1	119236595	3710
ENSMUSG00000030523	protein_coding	Trpm1	ENSMUST00000177102	protein_coding		7	1	64185459	2928
ENSMUSG00000099799	lincRNA	Gm28260	ENSMUST00000188438	lincRNA		Y	-1	35461232	622
ENSMUSG00000099799	lincRNA	Gm28260	ENSMUST00000190622	lincRNA		Y	-1	35461232	438
ENSMUSG00000075023	protein_coding	Accsl	ENSMUST00000128995	processed_transcript		2	-1	93868693	458
ENSMUSG00000081671	processed_pseudogene	Gm13167	ENSMUST00000118554	processed_pseudogene		4	-1	146224613	578
ENSMUSG00000026672	protein_coding	Optn	ENSMUST00000027986	protein_coding	principal1	2	-1	5063938	2411
ENSMUSG00000108204	processed_pseudogene	Gm44180	ENSMUST00000203671	processed_pseudogene		6	-1	115770327	408
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000142080	protein_coding		5	1	33861069	6323
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000110824	protein_coding		12	1	33147711	1675
ENSMUSG00000096600	TR_V_gene	Trav6d-3	ENSMUST00000181483	TR_V_gene		14	1	52725299	347
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000186554	processed_transcript		Y	-1	72999814	1136
ENSMUSG00000096600	TR_V_gene	Trav6d-3	ENSMUST00000184883	TR_V_gene	principal1	14	1	52726612	308
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000202912	retained_intron		5	1	33878215	1004
ENSMUSG00000020755	protein_coding	Sap30bp	ENSMUST00000146209	processed_transcript		11	1	115933573	379
ENSMUSG00000048981	protein_coding	Krt31	ENSMUST00000007318	protein_coding	principal1	11	-1	100050551	1581
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000188239	processed_transcript		6	1	119248784	2578
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000202525	nonsense_mediated_decay		5	1	33879151	2269
ENSMUSG00000011837	protein_coding	Snapc2	ENSMUST00000011981	protein_coding	principal1	8	1	4253080	1536
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000200981	retained_intron		5	1	33885484	454
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000186176	processed_transcript		6	1	119250015	748
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000133870	retained_intron		5	1	33885498	606
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000187222	processed_transcript		6	1	119267538	404
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000201572	retained_intron		5	1	33891905	537
ENSMUSG00000049076	protein_coding	Acap2	ENSMUST00000058033	protein_coding	alternative2	16	-1	31201163	6362
ENSMUSG00000057406	protein_coding	Nsd2	ENSMUST00000066854	protein_coding	principal4	5	1	33843112	6919
ENSMUSG00000020755	protein_coding	Sap30bp	ENSMUST00000131737	processed_transcript		11	1	115933637	357
ENSMUSG00000011837	protein_coding	Snapc2	ENSMUST00000208316	protein_coding		8	1	4253094	1190
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000191331	retained_intron		6	1	119267739	414
ENSMUSG00000026672	protein_coding	Optn	ENSMUST00000125203	processed_transcript		2	-1	5035903	2299
ENSMUSG00000020755	protein_coding	Sap30bp	ENSMUST00000021101	processed_transcript		11	1	115933674	2011
ENSMUSG00000011837	protein_coding	Snapc2	ENSMUST00000208459	protein_coding		8	1	4253419	956
ENSMUSG00000026672	protein_coding	Optn	ENSMUST00000145501	processed_transcript		2	-1	5037197	1198
ENSMUSG00000011837	protein_coding	Snapc2	ENSMUST00000208110	protein_coding		8	1	4255071	428
ENSMUSG00000113797	processed_pseudogene	Gm48043	ENSMUST00000221528	processed_pseudogene		12	-1	22914674	105
ENSMUSG00000026672	protein_coding	Optn	ENSMUST00000143809	processed_transcript		2	-1	5064051	697
ENSMUSG00000075420	protein_coding	Smim6	ENSMUST00000132961	protein_coding	principal1	11	1	115912017	978
ENSMUSG00000027120	protein_coding	Fshb	ENSMUST00000028533	protein_coding	principal1	2	-1	107059656	1600
ENSMUSG00000086430	antisense	4930551O13Rik	ENSMUST00000145585	antisense		2	1	5037280	1065
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000186757	processed_transcript		Y	-1	72999814	1581
ENSMUSG00000089922	protein_coding	Gm43517	ENSMUST00000110746	protein_coding	principal1	12	1	49385174	3904
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000186094	processed_transcript		Y	-1	72999726	302
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000186702	processed_transcript		6	1	119330769	448
ENSMUSG00000006585	protein_coding	Cdt1	ENSMUST00000006760	protein_coding	principal1	8	1	122568015	2189
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000187568	processed_transcript		Y	-1	72999732	655
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000186203	retained_intron		6	1	119330802	419
ENSMUSG00000020950	protein_coding	Foxg1	ENSMUST00000135006	processed_transcript		12	1	49382660	623
ENSMUSG00000100625	lincRNA	1700016G22Rik	ENSMUST00000186819	lincRNA		13	-1	5857712	544
ENSMUSG00000049076	protein_coding	Acap2	ENSMUST00000230614	protein_coding	principal2	16	-1	31201162	3414
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000185965	processed_transcript		6	1	119332562	761
ENSMUSG00000020950	protein_coding	Foxg1	ENSMUST00000154930	processed_transcript		12	1	49382800	633
ENSMUSG00000041460	protein_coding	Cacna2d4	ENSMUST00000037434	protein_coding	principal2	6	1	119236526	5803
ENSMUSG00000006585	protein_coding	Cdt1	ENSMUST00000212201	retained_intron		8	1	122568026	710
ENSMUSG00000100625	lincRNA	1700016G22Rik	ENSMUST00000186843	lincRNA		13	-1	5858092	594
ENSMUSG00000100625	lincRNA	1700016G22Rik	ENSMUST00000223142	lincRNA		13	-1	5857561	539
ENSMUSG00000049076	protein_coding	Acap2	ENSMUST00000230839	processed_transcript		16	-1	31096732	722
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000188989	processed_transcript		Y	-1	72997790	327
ENSMUSG00000020950	protein_coding	Foxg1	ENSMUST00000179669	protein_coding	principal1	12	1	49382883	3973
ENSMUSG00000052726	protein_coding	Kcnt2	ENSMUST00000120709	protein_coding	alternative1	1	1	140246158	5790
ENSMUSG00000046095	protein_coding	Krt32	ENSMUST00000139873	processed_transcript		11	-1	100085440	998
ENSMUSG00000028651	protein_coding	Ppie	ENSMUST00000030404	protein_coding	principal1	4	-1	123139951	1188
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000190302	processed_transcript		Y	-1	72999757	255
ENSMUSG00000049076	protein_coding	Acap2	ENSMUST00000229010	protein_coding	alternative2	16	-1	31200991	2810
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000190952	processed_transcript		Y	-1	72999757	121
ENSMUSG00000049076	protein_coding	Acap2	ENSMUST00000231125	protein_coding	alternative2	16	-1	31200991	2334
ENSMUSG00000006585	protein_coding	Cdt1	ENSMUST00000212967	retained_intron		8	1	122568026	2696
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000185228	processed_transcript		Y	-1	72999758	543
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000190200	processed_transcript		Y	-1	72999714	397
ENSMUSG00000049076	protein_coding	Acap2	ENSMUST00000239132	protein_coding		16	-1	31104883	663
ENSMUSG00000026678	protein_coding	Rgs5	ENSMUST00000027997	protein_coding	principal1	1	1	169655501	4096
ENSMUSG00000116943	processed_pseudogene	Gm18237	ENSMUST00000231868	processed_pseudogene		16	1	31157870	904
ENSMUSG00000006585	protein_coding	Cdt1	ENSMUST00000212053	processed_transcript		8	1	122569195	584
ENSMUSG00000052726	protein_coding	Kcnt2	ENSMUST00000120796	protein_coding	principal2	1	1	140246195	3540
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000185208	processed_transcript		Y	-1	72997790	229
ENSMUSG00000108844	processed_pseudogene	Gm6702	ENSMUST00000208496	processed_pseudogene		7	1	108019016	471
ENSMUSG00000102129	transcribed_unprocessed_pseudogene	Gm28969	ENSMUST00000190992	transcribed_unprocessed_pseudogene		Y	-1	72998227	615
ENSMUSG00000006585	protein_coding	Cdt1	ENSMUST00000212821	retained_intron		8	1	122571792	656
ENSMUSG00000020950	protein_coding	Foxg1	ENSMUST00000021333	protein_coding	principal1	12	1	49383007	2941
ENSMUSG00000048442	protein_coding	Smim5	ENSMUST00000152171	protein_coding	principal1	11	1	115899966	1113
ENSMUSG00000054005	protein_coding	Mill1	ENSMUST00000066780	protein_coding	principal1	7	1	18245347	2489
ENSMUSG00000052726	protein_coding	Kcnt2	ENSMUST00000119786	protein_coding		1	1	140246207	3624
ENSMUSG00000026678	protein_coding	Rgs5	ENSMUST00000152809	protein_coding		1	1	169655522	723
ENSMUSG00000052726	protein_coding	Kcnt2	ENSMUST00000192840	retained_intron		1	1	140442936	1012
ENSMUSG00000094426	protein_coding	Olfr478	ENSMUST00000210173	protein_coding	principal1	7	-1	108033989	2477
ENSMUSG00000048442	protein_coding	Smim5	ENSMUST00000142089	protein_coding	principal1	11	1	115900178	685
ENSMUSG00000097812	lincRNA	Gm26812	ENSMUST00000181776	lincRNA		8	1	121850194	599
ENSMUSG00000094426	protein_coding	Olfr478	ENSMUST00000049719	protein_coding	principal1	7	-1	108032341	945
ENSMUSG00000097812	lincRNA	Gm26812	ENSMUST00000181647	lincRNA		8	1	121851883	328
ENSMUSG00000048442	protein_coding	Smim5	ENSMUST00000131566	protein_coding		11	1	115900202	700
ENSMUSG00000046095	protein_coding	Krt32	ENSMUST00000107419	protein_coding	principal1	11	-1	100088226	1664
ENSMUSG00000067942	protein_coding	Zfp160	ENSMUST00000232473	protein_coding		17	1	21008903	2090
ENSMUSG00000110482	processed_pseudogene	Gm3889	ENSMUST00000212467	processed_pseudogene		8	1	124160073	612
ENSMUSG00000097841	lincRNA	4930511A02Rik	ENSMUST00000220342	lincRNA		12	1	11438227	1553
ENSMUSG00000118536	unprocessed_pseudogene	AL592545.1	ENSMUST00000238944	unprocessed_pseudogene		11	-1	100068121	189
ENSMUSG00000028651	protein_coding	Ppie	ENSMUST00000136466	processed_transcript		4	-1	123136898	861
ENSMUSG00000096746	TR_V_gene	Trav7d-3	ENSMUST00000179789	TR_V_gene	principal1	14	1	52744249	402
ENSMUSG00000052726	protein_coding	Kcnt2	ENSMUST00000145077	processed_transcript		1	1	140443101	1281
ENSMUSG00000113670	transcribed_unprocessed_pseudogene	Gm49686	ENSMUST00000222206	transcribed_unprocessed_pseudogene		12	-1	22960306	1400
ENSMUSG00000035033	protein_coding	Tbr1	ENSMUST00000048934	protein_coding	principal1	2	1	61804453	3977
ENSMUSG00000113289	processed_pseudogene	Gm48044	ENSMUST00000221861	processed_pseudogene		12	1	22998355	114
ENSMUSG00000087581	antisense	Gm11571	ENSMUST00000136820	antisense		11	1	100052286	2396
ENSMUSG00000097841	lincRNA	4930511A02Rik	ENSMUST00000181268	lincRNA		12	1	11438233	1935
ENSMUSG00000039431	protein_coding	Mtmr7	ENSMUST00000048890	nonsense_mediated_decay		8	-1	40634789	2799
ENSMUSG00000052726	protein_coding	Kcnt2	ENSMUST00000193606	nonsense_mediated_decay		1	1	140512956	442
ENSMUSG00000073164	lincRNA	2410018L13Rik	ENSMUST00000135421	lincRNA		12	-1	23010243	1407
ENSMUSG00000067942	protein_coding	Zfp160	ENSMUST00000231482	protein_coding		17	1	21008936	2087
ENSMUSG00000028651	protein_coding	Ppie	ENSMUST00000126558	processed_transcript		4	-1	123139025	804
ENSMUSG00000082632	processed_pseudogene	Gm13365	ENSMUST00000121188	processed_pseudogene		2	1	15396748	973
ENSMUSG00000104861	lincRNA	3110039M20Rik	ENSMUST00000127041	lincRNA		12	1	49389652	868
ENSMUSG00000095387	TR_V_gene	Trav6d-4	ENSMUST00000180717	TR_V_gene	principal5	14	1	52753367	378
ENSMUSG00000026609	protein_coding	Ush2a	ENSMUST00000060479	protein_coding	principal1	1	1	188263034	15695
ENSMUSG00000112113	lincRNA	Gm47698	ENSMUST00000220206	lincRNA		10	1	14771940	555
ENSMUSG00000019773	protein_coding	Fbxo5	ENSMUST00000019907	protein_coding	principal1	10	-1	5805600	1940
ENSMUSG00000020190	protein_coding	Mknk2	ENSMUST00000200082	protein_coding	principal2	10	-1	80676293	3439
ENSMUSG00000095387	TR_V_gene	Trav6d-4	ENSMUST00000183820	TR_V_gene	alternative2	14	1	52753398	338
ENSMUSG00000035033	protein_coding	Tbr1	ENSMUST00000102737	protein_coding		2	1	61806262	1406
ENSMUSG00000028651	protein_coding	Ppie	ENSMUST00000137778	processed_transcript		4	-1	123139930	669
ENSMUSG00000112724	processed_pseudogene	Gm47699	ENSMUST00000218504	processed_pseudogene		10	1	14931860	630
ENSMUSG00000104861	lincRNA	3110039M20Rik	ENSMUST00000145291	lincRNA		12	1	49390659	387
ENSMUSG00000020190	protein_coding	Mknk2	ENSMUST00000197276	protein_coding		10	-1	80672291	463
ENSMUSG00000073164	lincRNA	2410018L13Rik	ENSMUST00000149246	lincRNA		12	-1	23010284	3370
ENSMUSG00000102997	TEC	Gm17244	ENSMUST00000192482	TEC		4	-1	123116764	3416
ENSMUSG00000042029	protein_coding	Ncapg2	ENSMUST00000084828	protein_coding	principal1	12	1	116405402	4684
ENSMUSG00000102997	TEC	Gm17244	ENSMUST00000194481	TEC		4	-1	123116686	1288
ENSMUSG00000019773	protein_coding	Fbxo5	ENSMUST00000142200	processed_transcript		10	-1	5804600	396
ENSMUSG00000081389	processed_pseudogene	Gm13368	ENSMUST00000122443	processed_pseudogene		2	1	15481912	430
ENSMUSG00000035033	protein_coding	Tbr1	ENSMUST00000131538	processed_transcript		2	1	61806273	796
ENSMUSG00000073164	lincRNA	2410018L13Rik	ENSMUST00000141777	lincRNA		12	-1	23010209	1004
ENSMUSG00000073164	lincRNA	2410018L13Rik	ENSMUST00000130361	lincRNA		12	-1	23009998	628
ENSMUSG00000101842	processed_pseudogene	Gm28391	ENSMUST00000185202	processed_pseudogene		Y	-1	11777489	379
ENSMUSG00000091475	processed_transcript	Cerox1	ENSMUST00000163493	antisense		17	1	25570358	1802
ENSMUSG00000091475	processed_transcript	Cerox1	ENSMUST00000235022	antisense		17	1	25570807	1164
ENSMUSG00000035033	protein_coding	Tbr1	ENSMUST00000136867	processed_transcript		2	1	61802930	1370
ENSMUSG00000091475	processed_transcript	Cerox1	ENSMUST00000234667	lincRNA		17	1	25570829	1464
ENSMUSG00000042029	protein_coding	Ncapg2	ENSMUST00000222469	protein_coding		12	1	116405415	446
ENSMUSG00000073164	lincRNA	2410018L13Rik	ENSMUST00000127001	lincRNA		12	-1	23010225	1033
ENSMUSG00000100359	unprocessed_pseudogene	Gm21766	ENSMUST00000187962	unprocessed_pseudogene		Y	-1	73035139	696
ENSMUSG00000091475	processed_transcript	Cerox1	ENSMUST00000239478	antisense		17	1	25570844	1194
ENSMUSG00000020190	protein_coding	Mknk2	ENSMUST00000198819	protein_coding		10	-1	80672251	473
ENSMUSG00000113552	processed_pseudogene	Gm48046	ENSMUST00000220625	processed_pseudogene		12	-1	23009967	123
ENSMUSG00000091475	processed_transcript	Cerox1	ENSMUST00000234504	antisense		17	1	25570882	965
ENSMUSG00000093658	lincRNA	Gm20617	ENSMUST00000177332	lincRNA		6	-1	6484321	758
ENSMUSG00000042029	protein_coding	Ncapg2	ENSMUST00000221114	protein_coding		12	1	116405421	397
ENSMUSG00000108374	unprocessed_pseudogene	Gm33626	ENSMUST00000206790	unprocessed_pseudogene		7	-1	18327196	828
ENSMUSG00000020190	protein_coding	Mknk2	ENSMUST00000199949	protein_coding		10	-1	80678112	364
ENSMUSG00000026609	protein_coding	Ush2a	ENSMUST00000142159	retained_intron		1	1	188537807	2282
ENSMUSG00000093658	lincRNA	Gm20617	ENSMUST00000177082	lincRNA		6	-1	6484487	717
ENSMUSG00000042029	protein_coding	Ncapg2	ENSMUST00000221970	protein_coding		12	1	116405434	678
ENSMUSG00000042029	protein_coding	Ncapg2	ENSMUST00000220608	retained_intron		12	1	116415560	2808
ENSMUSG00000026609	protein_coding	Ush2a	ENSMUST00000127077	protein_coding		1	1	188953744	750
ENSMUSG00000093380	lincRNA	Gm20685	ENSMUST00000176654	lincRNA		6	1	6483022	489
ENSMUSG00000051817	protein_coding	Sox12	ENSMUST00000182625	protein_coding	principal1	2	-1	152398063	4453
ENSMUSG00000101871	unprocessed_pseudogene	Gm28389	ENSMUST00000190090	unprocessed_pseudogene		Y	-1	11801238	697
ENSMUSG00000039431	protein_coding	Mtmr7	ENSMUST00000048898	protein_coding	principal1	8	-1	40634776	2488
ENSMUSG00000042029	protein_coding	Ncapg2	ENSMUST00000222761	retained_intron		12	1	116452180	3355
ENSMUSG00000100919	unprocessed_pseudogene	Gm28655	ENSMUST00000191538	unprocessed_pseudogene		Y	-1	12019884	692
ENSMUSG00000020190	protein_coding	Mknk2	ENSMUST00000003433	protein_coding	alternative2	10	-1	80671976	3065
ENSMUSG00000075520	protein_coding	Malrd1	ENSMUST00000146205	protein_coding	principal1	2	1	15526479	6738
ENSMUSG00000039431	protein_coding	Mtmr7	ENSMUST00000173487	protein_coding		8	-1	40590514	1541
ENSMUSG00000061780	protein_coding	Cfd	ENSMUST00000217837	protein_coding	alternative2	10	1	79890853	871
ENSMUSG00000101123	processed_pseudogene	Gm28654	ENSMUST00000189801	processed_pseudogene		Y	-1	12056983	379
ENSMUSG00000051817	protein_coding	Sox12	ENSMUST00000063332	protein_coding	principal1	2	-1	152398046	4169
ENSMUSG00000117292	lincRNA	E330032C10Rik	ENSMUST00000232950	lincRNA		17	1	73250986	2078
ENSMUSG00000103865	TEC	Gm37416	ENSMUST00000193596	TEC		2	-1	16023425	318
ENSMUSG00000090958	protein_coding	Lrrc32	ENSMUST00000205937	protein_coding		7	1	98489283	360
ENSMUSG00000055515	protein_coding	Vmn2r81	ENSMUST00000020547	protein_coding	principal1	10	1	79247692	3361
ENSMUSG00000039431	protein_coding	Mtmr7	ENSMUST00000174205	protein_coding		8	-1	40634792	2679
ENSMUSG00000039431	protein_coding	Mtmr7	ENSMUST00000173957	protein_coding		8	-1	40634759	819
ENSMUSG00000081245	processed_pseudogene	Gm6587	ENSMUST00000120219	processed_pseudogene		2	1	15956925	613
ENSMUSG00000082653	processed_pseudogene	Gm15897	ENSMUST00000117770	processed_pseudogene		16	-1	11496306	1486
ENSMUSG00000100410	lincRNA	2310020H05Rik	ENSMUST00000189489	lincRNA		13	-1	99087921	720
ENSMUSG00000117292	lincRNA	E330032C10Rik	ENSMUST00000233479	lincRNA		17	1	73252545	2794
ENSMUSG00000103356	TEC	Gm37595	ENSMUST00000192668	TEC		2	1	15531113	1742
ENSMUSG00000048644	protein_coding	Ctxn1	ENSMUST00000053252	protein_coding	principal1	8	-1	4259274	1212
ENSMUSG00000090958	protein_coding	Lrrc32	ENSMUST00000205956	protein_coding	principal1	7	1	98489697	4576
ENSMUSG00000039431	protein_coding	Mtmr7	ENSMUST00000174537	processed_transcript		8	-1	40634797	359
ENSMUSG00000104779	processed_pseudogene	Gm43559	ENSMUST00000198755	processed_pseudogene		3	-1	134272510	466
ENSMUSG00000085732	antisense	Gm4279	ENSMUST00000154314	antisense		16	-1	11691857	2329
ENSMUSG00000094023	TR_V_gene	Trav7d-4	ENSMUST00000178768	TR_V_gene	principal1	14	1	52769753	451
ENSMUSG00000090958	protein_coding	Lrrc32	ENSMUST00000165205	protein_coding	principal1	7	1	98494222	3817
ENSMUSG00000043421	protein_coding	Hilpda	ENSMUST00000115289	protein_coding	principal1	6	1	29272488	658
ENSMUSG00000106628	TEC	Gm43558	ENSMUST00000200155	TEC		3	1	134357292	210
ENSMUSG00000085827	lincRNA	Gm11290	ENSMUST00000133204	lincRNA		13	1	22014468	327
ENSMUSG00000097031	lincRNA	Gm26820	ENSMUST00000180764	lincRNA		3	-1	134630765	1008
ENSMUSG00000085827	lincRNA	Gm11290	ENSMUST00000124833	lincRNA		13	1	22014468	396
ENSMUSG00000063146	protein_coding	Clip2	ENSMUST00000036999	protein_coding	alternative2	5	-1	134552434	4893
ENSMUSG00000104530	processed_pseudogene	Gm6077	ENSMUST00000196008	processed_pseudogene		3	-1	134366104	499
ENSMUSG00000085827	lincRNA	Gm11290	ENSMUST00000147811	lincRNA		13	1	22014481	314
ENSMUSG00000043421	protein_coding	Hilpda	ENSMUST00000054445	protein_coding	principal1	6	1	29272626	982
ENSMUSG00000061780	protein_coding	Cfd	ENSMUST00000061653	protein_coding	principal2	10	1	79890853	922
ENSMUSG00000085827	lincRNA	Gm11290	ENSMUST00000224688	lincRNA		13	1	22017506	3042
ENSMUSG00000024176	protein_coding	Sox8	ENSMUST00000025003	protein_coding	principal2	17	-1	25570686	3000
ENSMUSG00000055446	lincRNA	A630091E08Rik	ENSMUST00000069035	lincRNA		7	-1	98562990	828
ENSMUSG00000040010	protein_coding	Slc7a5	ENSMUST00000045557	protein_coding	principal1	8	-1	121907694	3517
ENSMUSG00000042541	protein_coding	Sem1	ENSMUST00000041111	protein_coding	principal1	6	-1	6578658	1472
ENSMUSG00000037686	protein_coding	Aspg	ENSMUST00000223457	retained_intron		12	1	112106679	476
ENSMUSG00000105765	lincRNA	4930539C22Rik	ENSMUST00000198231	lincRNA		3	-1	134423635	970
ENSMUSG00000042541	protein_coding	Sem1	ENSMUST00000205180	retained_intron		6	-1	6578663	2250
ENSMUSG00000040010	protein_coding	Slc7a5	ENSMUST00000182165	retained_intron		8	-1	121883914	618
ENSMUSG00000024176	protein_coding	Sox8	ENSMUST00000174560	protein_coding		17	-1	25570214	492
ENSMUSG00000089861	processed_pseudogene	Gm16139	ENSMUST00000160015	processed_pseudogene		16	1	16542323	420
ENSMUSG00000003505	protein_coding	Psg18	ENSMUST00000182983	protein_coding		7	-1	18349422	831
ENSMUSG00000104855	unprocessed_pseudogene	Gm43709	ENSMUST00000199870	unprocessed_pseudogene		3	-1	106179175	559
ENSMUSG00000024176	protein_coding	Sox8	ENSMUST00000173447	protein_coding	alternative2	17	-1	25570686	928
ENSMUSG00000063146	protein_coding	Clip2	ENSMUST00000100647	protein_coding	principal4	5	-1	134552434	4994
ENSMUSG00000003505	protein_coding	Psg18	ENSMUST00000183222	processed_transcript		7	-1	18346765	759
ENSMUSG00000040010	protein_coding	Slc7a5	ENSMUST00000183015	processed_transcript		8	-1	121896502	174
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000146040	protein_coding	principal5	12	1	33147754	2973
ENSMUSG00000083181	unprocessed_pseudogene	Gm13903	ENSMUST00000120945	unprocessed_pseudogene		2	-1	107123960	193
ENSMUSG00000086022	protein_coding	Rad51ap2	ENSMUST00000124065	protein_coding	principal1	12	1	11456079	3175
ENSMUSG00000063146	protein_coding	Clip2	ENSMUST00000202408	retained_intron		5	-1	134516278	491
ENSMUSG00000107090	antisense	Gm42884	ENSMUST00000202523	antisense		5	1	134552057	423
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000130740	processed_transcript		12	1	33147774	662
ENSMUSG00000112475	processed_pseudogene	Gm47703	ENSMUST00000218676	processed_pseudogene		10	1	15135903	398
ENSMUSG00000107090	antisense	Gm42884	ENSMUST00000200729	antisense		5	1	134556537	422
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000125192	protein_coding	alternative2	12	1	33147789	2644
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000136644	protein_coding		12	1	33147805	3155
ENSMUSG00000106691	TEC	2700029L08Rik	ENSMUST00000202895	TEC		5	-1	134520789	1465
ENSMUSG00000099495	unprocessed_pseudogene	Gm20800	ENSMUST00000185634	unprocessed_pseudogene		Y	-1	73239904	693
ENSMUSG00000042604	protein_coding	Kcna4	ENSMUST00000037012	protein_coding	principal1	2	1	107290639	4792
ENSMUSG00000112177	processed_pseudogene	Gm18188	ENSMUST00000219386	processed_pseudogene		10	-1	15228048	478
ENSMUSG00000113787	processed_pseudogene	Gm47807	ENSMUST00000221331	processed_pseudogene		12	1	11499295	392
ENSMUSG00000067942	protein_coding	Zfp160	ENSMUST00000088811	protein_coding	principal1	17	1	21008941	3800
ENSMUSG00000117401	lincRNA	4833419F23Rik	ENSMUST00000235048	lincRNA		18	1	4353558	845
ENSMUSG00000042604	protein_coding	Kcna4	ENSMUST00000173191	processed_transcript		2	1	107291395	370
ENSMUSG00000085957	protein_coding	Syna	ENSMUST00000149604	protein_coding	principal1	5	-1	134560171	2026
ENSMUSG00000113226	processed_transcript	Gm47808	ENSMUST00000219088	lincRNA		12	-1	11512390	2705
ENSMUSG00000113226	processed_transcript	Gm47808	ENSMUST00000221353	TEC		12	-1	11512390	3362
ENSMUSG00000117401	lincRNA	4833419F23Rik	ENSMUST00000234768	lincRNA		18	1	4363050	259
ENSMUSG00000112928	lincRNA	Gm47710	ENSMUST00000220374	lincRNA		10	1	15300231	436
ENSMUSG00000112928	lincRNA	Gm47710	ENSMUST00000217695	lincRNA		10	1	15300397	1838
ENSMUSG00000111997	transcribed_processed_pseudogene	Gm5176	ENSMUST00000218244	processed_transcript		10	1	111500739	1227
ENSMUSG00000111997	transcribed_processed_pseudogene	Gm5176	ENSMUST00000220267	transcribed_processed_pseudogene		10	1	111500784	583
ENSMUSG00000067942	protein_coding	Zfp160	ENSMUST00000232354	protein_coding		17	1	21008951	1041
ENSMUSG00000067942	protein_coding	Zfp160	ENSMUST00000231679	retained_intron		17	1	21008957	1206
ENSMUSG00000105084	TEC	Gm43365	ENSMUST00000196522	TEC		5	-1	108600626	2106
ENSMUSG00000028172	protein_coding	Tacr3	ENSMUST00000029822	protein_coding	principal1	3	1	134829007	3762
ENSMUSG00000101747	unprocessed_pseudogene	Gm21683	ENSMUST00000186201	unprocessed_pseudogene		Y	-1	73314512	678
ENSMUSG00000067942	protein_coding	Zfp160	ENSMUST00000232595	protein_coding		17	1	21008999	756
ENSMUSG00000067942	protein_coding	Zfp160	ENSMUST00000232320	protein_coding		17	1	21008999	611
ENSMUSG00000026791	protein_coding	Slc2a8	ENSMUST00000028129	protein_coding	principal1	2	-1	32982082	2108
ENSMUSG00000111974	processed_pseudogene	Gm4803	ENSMUST00000218729	processed_pseudogene		12	-1	11667049	1279
ENSMUSG00000067942	protein_coding	Zfp160	ENSMUST00000232663	protein_coding		17	1	21009044	552
ENSMUSG00000112788	TEC	Gm47821	ENSMUST00000219725	TEC		12	-1	11700546	1679
ENSMUSG00000112158	TEC	Gm47822	ENSMUST00000218415	TEC		12	-1	11701678	373
ENSMUSG00000054716	protein_coding	Zfp771	ENSMUST00000052509	protein_coding	principal1	7	1	127244274	1484
ENSMUSG00000112413	processed_pseudogene	Gm6867	ENSMUST00000219165	processed_pseudogene		12	-1	11760871	425
ENSMUSG00000113013	lincRNA	Gm47833	ENSMUST00000222709	lincRNA		12	1	11781535	415
ENSMUSG00000084127	processed_pseudogene	Gm13169	ENSMUST00000122090	processed_pseudogene		4	1	146239954	1459
ENSMUSG00000113330	lincRNA	Gm34237	ENSMUST00000220575	lincRNA		12	1	11826607	1257
ENSMUSG00000113275	processed_pseudogene	Tubb2a-ps2	ENSMUST00000221547	processed_pseudogene		12	-1	11882663	1339
ENSMUSG00000003505	protein_coding	Psg18	ENSMUST00000003597	protein_coding	principal1	7	-1	18355009	1659
ENSMUSG00000054716	protein_coding	Zfp771	ENSMUST00000151893	processed_transcript		7	1	127245101	173
ENSMUSG00000026791	protein_coding	Slc2a8	ENSMUST00000153484	protein_coding		2	-1	32982017	1168
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000090597	protein_coding		12	1	33302515	2563
ENSMUSG00000112395	processed_pseudogene	Gm7198	ENSMUST00000219635	processed_pseudogene		10	-1	15521404	1074
ENSMUSG00000049577	protein_coding	Zfpm1	ENSMUST00000054052	protein_coding	principal1	8	1	122282141	3390
ENSMUSG00000054716	protein_coding	Zfp771	ENSMUST00000205583	protein_coding		7	1	127245187	580
ENSMUSG00000111963	lincRNA	Gm32283	ENSMUST00000218861	lincRNA		10	-1	15738822	549
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000133549	processed_transcript		12	1	33314277	665
ENSMUSG00000112335	processed_pseudogene	Gm46188	ENSMUST00000219927	processed_pseudogene		10	1	15670924	462
ENSMUSG00000026791	protein_coding	Slc2a8	ENSMUST00000194066	nonsense_mediated_decay		2	-1	32982017	869
ENSMUSG00000049577	protein_coding	Zfpm1	ENSMUST00000176883	processed_transcript		8	1	122307320	314
ENSMUSG00000112089	lincRNA	Gm47712	ENSMUST00000219416	lincRNA		10	1	15600227	506
ENSMUSG00000112800	lincRNA	Gm40604	ENSMUST00000217765	lincRNA		10	-1	15760012	655
ENSMUSG00000026791	protein_coding	Slc2a8	ENSMUST00000193695	nonsense_mediated_decay		2	-1	32982017	1339
ENSMUSG00000086758	lincRNA	Gm13912	ENSMUST00000156541	lincRNA		2	-1	108291319	1860
ENSMUSG00000112800	lincRNA	Gm40604	ENSMUST00000219541	lincRNA		10	-1	15759990	522
ENSMUSG00000037731	protein_coding	Themis2	ENSMUST00000045154	protein_coding	principal1	4	-1	132796387	3079
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000144586	protein_coding		12	1	33314289	3042
ENSMUSG00000003505	protein_coding	Psg18	ENSMUST00000098783	protein_coding		7	-1	18354944	1783
ENSMUSG00000083590	processed_pseudogene	Gm13916	ENSMUST00000117368	processed_pseudogene		2	-1	108447084	628
ENSMUSG00000049577	protein_coding	Zfpm1	ENSMUST00000177356	processed_transcript		8	1	122333698	559
ENSMUSG00000034362	protein_coding	Csta1	ENSMUST00000096090	protein_coding	principal1	16	-1	36131241	2783
ENSMUSG00000026791	protein_coding	Slc2a8	ENSMUST00000195863	protein_coding		2	-1	32982071	360
ENSMUSG00000082113	processed_pseudogene	Gm13915	ENSMUST00000119314	processed_pseudogene		2	1	108572594	931
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000155386	processed_transcript		12	1	33314400	369
ENSMUSG00000026791	protein_coding	Slc2a8	ENSMUST00000130769	retained_intron		2	-1	32982019	909
ENSMUSG00000049577	protein_coding	Zfpm1	ENSMUST00000176690	processed_transcript		8	1	122333786	865
ENSMUSG00000034362	protein_coding	Csta1	ENSMUST00000161638	protein_coding		16	-1	36131205	422
ENSMUSG00000043145	processed_transcript	Gm11292	ENSMUST00000146121	processed_transcript		13	1	22026699	1153
ENSMUSG00000049577	protein_coding	Zfpm1	ENSMUST00000212315	processed_transcript		8	1	122334631	704
ENSMUSG00000026791	protein_coding	Slc2a8	ENSMUST00000123643	processed_transcript		2	-1	32982083	343
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000154742	protein_coding		12	1	33315397	3548
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000078800	protein_coding	alternative1	17	-1	48409765	3653
ENSMUSG00000083009	processed_pseudogene	Gm1335	ENSMUST00000121653	processed_pseudogene		2	-1	93940878	386
ENSMUSG00000102570	TEC	Gm37968	ENSMUST00000195131	TEC		3	1	51489620	3201
ENSMUSG00000043903	protein_coding	Zfp469	ENSMUST00000187142	protein_coding	principal1	8	1	122258620	12777
ENSMUSG00000060956	unprocessed_pseudogene	Gm10092	ENSMUST00000077110	unprocessed_pseudogene		16	1	36135939	180
ENSMUSG00000069302	protein_coding	H2ac12	ENSMUST00000091742	protein_coding	principal1	13	-1	22035568	405
ENSMUSG00000043903	protein_coding	Zfp469	ENSMUST00000055537	protein_coding		8	1	122269569	3078
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000145589	retained_intron		12	1	33315405	369
ENSMUSG00000102775	TEC	Gm38160	ENSMUST00000193090	TEC		3	-1	51484829	2499
ENSMUSG00000031600	protein_coding	Vps37a	ENSMUST00000238390	retained_intron		8	1	40511783	3818
ENSMUSG00000079652	protein_coding	Fam71f2	ENSMUST00000167131	protein_coding		6	1	29279593	647
ENSMUSG00000027739	protein_coding	Rab33b	ENSMUST00000195715	processed_transcript		3	1	51483920	933
ENSMUSG00000037686	protein_coding	Aspg	ENSMUST00000079400	protein_coding	principal1	12	1	112106679	2722
ENSMUSG00000027739	protein_coding	Rab33b	ENSMUST00000192172	protein_coding		3	1	51483930	397
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000126275	retained_intron		12	1	33345305	2712
ENSMUSG00000062727	protein_coding	H2bc12	ENSMUST00000110455	protein_coding	principal1	13	1	22035870	476
ENSMUSG00000020564	protein_coding	Atxn7l1	ENSMUST00000142184	processed_transcript		12	1	33367324	711
ENSMUSG00000037686	protein_coding	Aspg	ENSMUST00000223412	protein_coding		12	1	112106869	537
ENSMUSG00000112329	TEC	Gm47908	ENSMUST00000220089	TEC		10	-1	33477472	358
ENSMUSG00000037686	protein_coding	Aspg	ENSMUST00000221091	retained_intron		12	1	112106886	754
ENSMUSG00000034872	protein_coding	Gipc3	ENSMUST00000045102	protein_coding	principal1	10	-1	81343266	3521
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000162460	protein_coding	principal3	17	-1	48409906	3706
ENSMUSG00000039079	protein_coding	Trhr2	ENSMUST00000044123	protein_coding	principal1	8	-1	122360746	1340
ENSMUSG00000037686	protein_coding	Aspg	ENSMUST00000220719	nonsense_mediated_decay		12	1	112106911	425
ENSMUSG00000083803	processed_pseudogene	Gm12455	ENSMUST00000121242	processed_pseudogene		4	1	44382922	416
ENSMUSG00000079652	protein_coding	Fam71f2	ENSMUST00000115286	protein_coding	principal1	6	1	29281141	1180
ENSMUSG00000037686	protein_coding	Aspg	ENSMUST00000223184	nonsense_mediated_decay		12	1	112112940	702
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000014421	protein_coding	principal4	5	-1	90366577	10458
ENSMUSG00000027739	protein_coding	Rab33b	ENSMUST00000054387	protein_coding	principal1	3	1	51483966	3492
ENSMUSG00000037686	protein_coding	Aspg	ENSMUST00000222645	retained_intron		12	1	112119954	512
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000175998	protein_coding		5	-1	136360018	2195
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000196919	retained_intron		5	-1	90232464	3182
ENSMUSG00000079652	protein_coding	Fam71f2	ENSMUST00000167608	nonsense_mediated_decay		6	1	29281143	991
ENSMUSG00000041556	protein_coding	Fbxo2	ENSMUST00000047951	protein_coding	principal1	4	1	148160621	1288
ENSMUSG00000024234	protein_coding	Mtpap	ENSMUST00000234186	nonsense_mediated_decay		18	1	4375592	2110
ENSMUSG00000078377	processed_pseudogene	Gm4294	ENSMUST00000105169	processed_pseudogene		12	1	12023045	614
ENSMUSG00000037686	protein_coding	Aspg	ENSMUST00000222970	protein_coding		12	1	112121152	1410
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000168058	protein_coding	alternative2	5	-1	90366564	9311
ENSMUSG00000014504	protein_coding	Srp19	ENSMUST00000126518	processed_transcript		18	1	34330847	772
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000046719	protein_coding	alternative1	17	-1	48409765	3645
ENSMUSG00000027196	antisense	Alkbh3os1	ENSMUST00000136886	antisense		2	1	93980034	1550
ENSMUSG00000014504	protein_coding	Srp19	ENSMUST00000131713	processed_transcript		18	1	34331123	744
ENSMUSG00000027196	antisense	Alkbh3os1	ENSMUST00000028621	antisense		2	1	93980034	1549
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000081914	protein_coding	alternative2	5	-1	90366228	8057
ENSMUSG00000014504	protein_coding	Srp19	ENSMUST00000140279	retained_intron		18	1	34331145	3295
ENSMUSG00000059248	protein_coding	Septin9	ENSMUST00000093907	protein_coding	alternative2	11	1	117199661	3616
ENSMUSG00000107115	TEC	Gm43052	ENSMUST00000201451	TEC		5	1	118687618	1628
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000197021	protein_coding	alternative2	5	-1	90339743	8067
ENSMUSG00000107364	TEC	Gm43051	ENSMUST00000201096	TEC		5	1	118707402	2678
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000197327	retained_intron		5	-1	90239688	3275
ENSMUSG00000083565	processed_pseudogene	Gm11941	ENSMUST00000119904	processed_pseudogene		4	1	32892686	610
ENSMUSG00000106798	TEC	Gm43275	ENSMUST00000202053	TEC		5	1	118618294	1020
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000159063	protein_coding	alternative1	17	-1	48400544	1255
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000125473	processed_transcript		2	-1	93984820	731
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000126255	processed_transcript		2	-1	93984851	679
ENSMUSG00000107286	TEC	Gm43788	ENSMUST00000201539	TEC		5	1	118602716	2417
ENSMUSG00000040809	protein_coding	Chil3	ENSMUST00000063062	protein_coding	principal1	3	-1	106167564	1539
ENSMUSG00000059248	protein_coding	Septin9	ENSMUST00000106354	protein_coding	alternative2	11	1	117232285	3869
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000160319	protein_coding	alternative1	17	-1	48409730	1407
ENSMUSG00000019984	protein_coding	Med23	ENSMUST00000092646	protein_coding	alternative1	10	1	24869986	5098
ENSMUSG00000106912	TEC	Gm43785	ENSMUST00000201036	TEC		5	-1	118563101	1345
ENSMUSG00000107116	TEC	Gm43274	ENSMUST00000202545	TEC		5	1	118644373	5000
ENSMUSG00000020205	protein_coding	Phlda1	ENSMUST00000164773	protein_coding	principal1	10	1	111506286	1949
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000159237	protein_coding		17	-1	48393223	805
ENSMUSG00000059248	protein_coding	Septin9	ENSMUST00000019038	protein_coding	alternative2	11	1	117266246	3784
ENSMUSG00000040809	protein_coding	Chil3	ENSMUST00000149836	protein_coding		3	-1	106149761	174
ENSMUSG00000020205	protein_coding	Phlda1	ENSMUST00000186359	processed_transcript		10	1	111507696	362
ENSMUSG00000040809	protein_coding	Chil3	ENSMUST00000129563	retained_intron		3	-1	106160626	361
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000161256	protein_coding		17	-1	48393459	701
ENSMUSG00000037750	protein_coding	Fam222b	ENSMUST00000073705	protein_coding	principal1	11	1	78094660	3258
ENSMUSG00000018076	protein_coding	Med13l	ENSMUST00000201614	retained_intron		5	1	118560679	2218
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000200012	retained_intron		5	-1	90304104	4225
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000161603	retained_intron		17	-1	48392145	741
ENSMUSG00000100113	lincRNA	Gm28592	ENSMUST00000186844	lincRNA		10	-1	111507662	741
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000199096	retained_intron		5	-1	90263323	1037
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000161117	protein_coding		17	-1	48399038	643
ENSMUSG00000024234	protein_coding	Mtpap	ENSMUST00000025077	protein_coding	principal1	18	1	4375592	2651
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000199424	retained_intron		5	-1	90266684	6689
ENSMUSG00000037750	protein_coding	Fam222b	ENSMUST00000100782	protein_coding		11	1	78094708	2473
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000159535	protein_coding		17	-1	48409741	880
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000197037	retained_intron		5	-1	90275500	8281
ENSMUSG00000097082	lincRNA	4933440J02Rik	ENSMUST00000181547	lincRNA		10	-1	111594273	1144
ENSMUSG00000024654	protein_coding	Asrgl1	ENSMUST00000049948	protein_coding	principal1	19	-1	9135636	4195
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000199965	retained_intron		5	-1	90278522	2178
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000163066	retained_intron		17	-1	48396054	605
ENSMUSG00000037750	protein_coding	Fam222b	ENSMUST00000155571	protein_coding	principal1	11	1	78115606	3358
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000199905	retained_intron		5	-1	90295132	2842
ENSMUSG00000038332	protein_coding	Sesn1	ENSMUST00000099931	protein_coding	alternative1	10	1	41809935	3809
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000202226	retained_intron		5	-1	90366185	2091
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000160804	retained_intron		17	-1	48409688	640
ENSMUSG00000024654	protein_coding	Asrgl1	ENSMUST00000150353	processed_transcript		19	-1	9135531	320
ENSMUSG00000060727	processed_pseudogene	Gm12571	ENSMUST00000118132	processed_pseudogene		11	-1	78149438	243
ENSMUSG00000024234	protein_coding	Mtpap	ENSMUST00000234422	nonsense_mediated_decay		18	1	4375596	2626
ENSMUSG00000023994	protein_coding	Nfya	ENSMUST00000161686	retained_intron		17	-1	48409750	2779
ENSMUSG00000024234	protein_coding	Mtpap	ENSMUST00000235025	retained_intron		18	1	4375603	922
ENSMUSG00000055204	protein_coding	Ankrd17	ENSMUST00000218526	protein_coding		5	-1	90366185	4938
ENSMUSG00000024234	protein_coding	Mtpap	ENSMUST00000234614	retained_intron		18	1	4375604	3608
ENSMUSG00000014504	protein_coding	Srp19	ENSMUST00000072576	protein_coding	principal1	18	1	34331145	876
ENSMUSG00000097848	lincRNA	Gm807	ENSMUST00000181742	lincRNA		13	1	99100706	1723
ENSMUSG00000024234	protein_coding	Mtpap	ENSMUST00000234924	protein_coding		18	1	4383246	1880
ENSMUSG00000038332	protein_coding	Sesn1	ENSMUST00000041438	protein_coding	principal3	10	1	41887439	2600
ENSMUSG00000043705	protein_coding	Capn13	ENSMUST00000095208	protein_coding	principal1	17	-1	73399296	2614
ENSMUSG00000024658	antisense	Gm9750	ENSMUST00000142025	antisense		19	1	9135157	2017
ENSMUSG00000097848	lincRNA	Gm807	ENSMUST00000224929	lincRNA		13	1	99100761	408
ENSMUSG00000101514	lincRNA	Gm5524	ENSMUST00000185409	lincRNA		1	1	27884046	2002
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000228368	retained_intron		15	-1	37979034	2953
ENSMUSG00000042699	protein_coding	Dhx9	ENSMUST00000186380	protein_coding	principal2	1	-1	153487608	4561
ENSMUSG00000117804	processed_pseudogene	Gm6252	ENSMUST00000236432	processed_pseudogene		19	1	9216381	580
ENSMUSG00000101033	processed_pseudogene	Gm18776	ENSMUST00000188833	processed_pseudogene		1	-1	27901072	654
ENSMUSG00000117594	processed_transcript	Gm50096	ENSMUST00000234586	processed_transcript		18	1	4353644	496
ENSMUSG00000014504	protein_coding	Srp19	ENSMUST00000119329	protein_coding		18	1	34331158	613
ENSMUSG00000043705	protein_coding	Capn13	ENSMUST00000233432	retained_intron		17	-1	73400866	1351
ENSMUSG00000038332	protein_coding	Sesn1	ENSMUST00000214835	processed_transcript		10	1	41898373	90
ENSMUSG00000111131	TEC	9930024M15Rik	ENSMUST00000214902	TEC		10	1	41826538	2584
ENSMUSG00000097641	antisense	Gm26865	ENSMUST00000180970	antisense		18	-1	4379985	3289
ENSMUSG00000014504	protein_coding	Srp19	ENSMUST00000142010	nonsense_mediated_decay		18	1	34331176	956
ENSMUSG00000101276	unprocessed_pseudogene	Gm28657	ENSMUST00000186950	unprocessed_pseudogene		Y	-1	12176249	687
ENSMUSG00000044708	protein_coding	Kcnj10	ENSMUST00000056136	protein_coding	principal1	1	1	172341210	5407
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000228029	retained_intron		15	-1	37984367	2279
ENSMUSG00000109235	processed_pseudogene	Gm5997	ENSMUST00000208154	processed_pseudogene		7	-1	18377523	1864
ENSMUSG00000093581	processed_pseudogene	Gm18006	ENSMUST00000177411	processed_pseudogene		6	-1	6647278	662
ENSMUSG00000087477	antisense	Gm13822	ENSMUST00000127563	antisense		5	-1	114923277	346
ENSMUSG00000079608	protein_coding	Stard6	ENSMUST00000114959	protein_coding	principal1	18	1	70472454	1496
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000217146	retained_intron		9	-1	50525827	4211
ENSMUSG00000093675	lincRNA	Gm20618	ENSMUST00000177482	lincRNA		6	-1	6684806	1227
ENSMUSG00000079608	protein_coding	Stard6	ENSMUST00000168249	protein_coding	principal1	18	1	70472572	1167
ENSMUSG00000028622	protein_coding	Mrpl37	ENSMUST00000030365	protein_coding	principal1	4	-1	107066868	1498
ENSMUSG00000093675	lincRNA	Gm20618	ENSMUST00000177161	lincRNA		6	-1	6691521	608
ENSMUSG00000006586	protein_coding	Runx1t1	ENSMUST00000006761	protein_coding	alternative2	4	1	13743436	5783
ENSMUSG00000042699	protein_coding	Dhx9	ENSMUST00000186966	nonsense_mediated_decay		1	-1	153487645	2406
ENSMUSG00000037847	protein_coding	Nmrk1	ENSMUST00000159061	retained_intron		19	1	18631950	357
ENSMUSG00000079608	protein_coding	Stard6	ENSMUST00000164223	protein_coding	principal1	18	1	70472628	976
ENSMUSG00000060639	protein_coding	H4c9	ENSMUST00000102977	protein_coding	principal1	13	-1	22041362	727
ENSMUSG00000050229	protein_coding	Pigm	ENSMUST00000052455	protein_coding	principal1	1	1	172376546	7554
ENSMUSG00000100368	lincRNA	Gm28656	ENSMUST00000190017	lincRNA		Y	1	12211889	174
ENSMUSG00000109209	TEC	Gm45104	ENSMUST00000208748	TEC		7	-1	18400865	4350
ENSMUSG00000079608	protein_coding	Stard6	ENSMUST00000174118	protein_coding	principal1	18	1	70472666	1185
ENSMUSG00000059248	protein_coding	Septin9	ENSMUST00000153668	protein_coding		11	1	117308154	374
ENSMUSG00000006586	protein_coding	Runx1t1	ENSMUST00000150583	processed_transcript		4	1	13751297	2062
ENSMUSG00000102278	TEC	Gm37145	ENSMUST00000193540	TEC		1	-1	172390989	2756
ENSMUSG00000028622	protein_coding	Mrpl37	ENSMUST00000141150	retained_intron		4	-1	107059950	2799
ENSMUSG00000028622	protein_coding	Mrpl37	ENSMUST00000125157	processed_transcript		4	-1	107064770	827
ENSMUSG00000059248	protein_coding	Septin9	ENSMUST00000127383	protein_coding		11	1	117326433	778
ENSMUSG00000079608	protein_coding	Stard6	ENSMUST00000173951	protein_coding		18	1	70473017	586
ENSMUSG00000028622	protein_coding	Mrpl37	ENSMUST00000125397	processed_transcript		4	-1	107066820	1047
ENSMUSG00000006586	protein_coding	Runx1t1	ENSMUST00000098257	protein_coding	alternative2	4	1	13771377	2332
ENSMUSG00000100231	protein_coding	Gm29554	ENSMUST00000187922	protein_coding	principal1	Y	1	12273932	821
ENSMUSG00000028622	protein_coding	Mrpl37	ENSMUST00000138788	retained_intron		4	-1	107065357	876
ENSMUSG00000079608	protein_coding	Stard6	ENSMUST00000174667	protein_coding		18	1	70473200	534
ENSMUSG00000101469	unprocessed_pseudogene	Gm29556	ENSMUST00000187591	unprocessed_pseudogene		Y	-1	12331231	696
ENSMUSG00000109227	transcribed_processed_pseudogene	Gm29791	ENSMUST00000207888	transcribed_processed_pseudogene		7	-1	44790648	369
ENSMUSG00000069301	protein_coding	H2ac11	ENSMUST00000091741	protein_coding	principal1	13	-1	22042944	485
ENSMUSG00000059248	protein_coding	Septin9	ENSMUST00000100193	protein_coding	principal3	11	1	117331720	2924
ENSMUSG00000019984	protein_coding	Med23	ENSMUST00000177522	retained_intron		10	1	24870037	2192
ENSMUSG00000079608	protein_coding	Stard6	ENSMUST00000173612	processed_transcript		18	1	70493489	547
ENSMUSG00000042699	protein_coding	Dhx9	ENSMUST00000190544	nonsense_mediated_decay		1	-1	153478139	2018
ENSMUSG00000109227	transcribed_processed_pseudogene	Gm29791	ENSMUST00000207144	processed_transcript		7	-1	44790830	380
ENSMUSG00000103357	transcribed_processed_pseudogene	Gm7804	ENSMUST00000192784	processed_transcript		1	1	172458569	738
ENSMUSG00000006586	protein_coding	Runx1t1	ENSMUST00000098256	protein_coding	principal3	4	1	13784782	3317
ENSMUSG00000095508	protein_coding	Gm20812	ENSMUST00000189550	protein_coding	principal1	Y	1	12381981	1230
ENSMUSG00000103357	transcribed_processed_pseudogene	Gm7804	ENSMUST00000194187	transcribed_processed_pseudogene		1	1	172474034	854
ENSMUSG00000095508	protein_coding	Gm20812	ENSMUST00000179220	protein_coding	principal1	Y	1	12383184	684
ENSMUSG00000112996	processed_pseudogene	Gm48064	ENSMUST00000223360	processed_pseudogene		12	-1	23018812	105
ENSMUSG00000093651	processed_pseudogene	Gm5873	ENSMUST00000177157	processed_pseudogene		6	-1	6736492	1066
ENSMUSG00000006586	protein_coding	Runx1t1	ENSMUST00000139736	processed_transcript		4	1	13889220	405
ENSMUSG00000042699	protein_coding	Dhx9	ENSMUST00000188345	protein_coding		1	-1	153487651	2346
ENSMUSG00000059248	protein_coding	Septin9	ENSMUST00000106349	protein_coding	principal3	11	1	117332345	2932
ENSMUSG00000103330	unprocessed_pseudogene	Gm35108	ENSMUST00000194321	unprocessed_pseudogene		Y	1	12418987	699
ENSMUSG00000069300	protein_coding	H2bc11	ENSMUST00000110452	protein_coding	principal1	13	1	22043214	463
ENSMUSG00000019984	protein_coding	Med23	ENSMUST00000177232	nonsense_mediated_decay		10	1	24870037	3953
ENSMUSG00000063779	protein_coding	Chil4	ENSMUST00000082219	protein_coding	principal1	3	-1	106219507	1539
ENSMUSG00000042699	protein_coding	Dhx9	ENSMUST00000189516	retained_intron		1	-1	153478153	658
ENSMUSG00000006586	protein_coding	Runx1t1	ENSMUST00000105566	protein_coding	alternative2	4	1	13751297	6090
ENSMUSG00000071669	protein_coding	Snx29	ENSMUST00000180792	protein_coding	principal1	16	1	11322908	2667
ENSMUSG00000031600	protein_coding	Vps37a	ENSMUST00000098817	protein_coding	principal1	8	1	40511783	6002
ENSMUSG00000063779	protein_coding	Chil4	ENSMUST00000196128	retained_intron		3	-1	106210516	1322
ENSMUSG00000114817	TEC	Gm48356	ENSMUST00000225374	TEC		13	1	22049514	1937
ENSMUSG00000042699	protein_coding	Dhx9	ENSMUST00000189509	retained_intron		1	-1	153487658	2658
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000034570	protein_coding	principal1	9	-1	50528651	1046
ENSMUSG00000042699	protein_coding	Dhx9	ENSMUST00000190383	retained_intron		1	-1	153480550	2274
ENSMUSG00000113751	unprocessed_pseudogene	Gm9293	ENSMUST00000223096	unprocessed_pseudogene		12	-1	23093393	306
ENSMUSG00000105920	processed_pseudogene	Gm5408	ENSMUST00000197998	processed_pseudogene		14	1	52774869	747
ENSMUSG00000071669	protein_coding	Snx29	ENSMUST00000096273	protein_coding		16	1	11405648	1622
ENSMUSG00000031600	protein_coding	Vps37a	ENSMUST00000238624	retained_intron		8	1	40511803	2276
ENSMUSG00000083873	unprocessed_pseudogene	Vmn1r-ps92	ENSMUST00000120775	unprocessed_pseudogene		13	-1	22057862	517
ENSMUSG00000042699	protein_coding	Dhx9	ENSMUST00000189425	retained_intron		1	-1	153487634	1604
ENSMUSG00000031600	protein_coding	Vps37a	ENSMUST00000238249	retained_intron		8	1	40511803	2406
ENSMUSG00000083221	processed_pseudogene	Gm14528	ENSMUST00000120615	processed_pseudogene		6	1	30719873	231
ENSMUSG00000042699	protein_coding	Dhx9	ENSMUST00000042141	protein_coding	alternative2	1	-1	153487660	4616
ENSMUSG00000054967	protein_coding	Zfp647	ENSMUST00000229055	protein_coding	principal1	15	-1	76925448	2212
ENSMUSG00000059248	protein_coding	Septin9	ENSMUST00000155331	retained_intron		11	1	117332428	4863
ENSMUSG00000082869	unprocessed_pseudogene	Vmn1r-ps93	ENSMUST00000117599	unprocessed_pseudogene		13	1	22078253	432
ENSMUSG00000031600	protein_coding	Vps37a	ENSMUST00000238339	protein_coding		8	1	40511868	1442
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000213640	retained_intron		9	-1	50528656	3117
ENSMUSG00000071669	protein_coding	Snx29	ENSMUST00000122168	protein_coding		16	1	11406657	2096
ENSMUSG00000059248	protein_coding	Septin9	ENSMUST00000134852	retained_intron		11	1	117353180	647
ENSMUSG00000019984	protein_coding	Med23	ENSMUST00000020159	protein_coding	principal3	10	1	24870047	4798
ENSMUSG00000031600	protein_coding	Vps37a	ENSMUST00000238575	processed_transcript		8	1	40518814	657
ENSMUSG00000054967	protein_coding	Zfp647	ENSMUST00000229865	protein_coding		15	-1	76925412	644
ENSMUSG00000071669	protein_coding	Snx29	ENSMUST00000150993	protein_coding		16	1	11420708	2942
ENSMUSG00000059248	protein_coding	Septin9	ENSMUST00000129387	retained_intron		11	1	117359360	555
ENSMUSG00000031600	protein_coding	Vps37a	ENSMUST00000238628	retained_intron		8	1	40543424	879
ENSMUSG00000019984	protein_coding	Med23	ENSMUST00000176827	processed_transcript		10	1	24870098	1635
ENSMUSG00000054967	protein_coding	Zfp647	ENSMUST00000230677	protein_coding		15	-1	76925391	635
ENSMUSG00000026676	protein_coding	Ccdc3	ENSMUST00000027988	protein_coding	principal1	2	1	5137776	2670
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000215416	protein_coding		9	-1	50528724	439
ENSMUSG00000036961	protein_coding	Wnt8b	ENSMUST00000041163	protein_coding	principal1	19	1	44493472	3376
ENSMUSG00000019984	protein_coding	Med23	ENSMUST00000176313	protein_coding		10	1	24870310	770
ENSMUSG00000054967	protein_coding	Zfp647	ENSMUST00000048854	protein_coding	principal1	15	-1	76918010	1608
ENSMUSG00000019984	protein_coding	Med23	ENSMUST00000177175	retained_intron		10	1	24870644	419
ENSMUSG00000081005	processed_pseudogene	Gm13198	ENSMUST00000119322	processed_pseudogene		2	1	5156392	826
ENSMUSG00000059534	protein_coding	Uqcr10	ENSMUST00000058407	protein_coding	principal1	11	-1	4704342	434
ENSMUSG00000036961	protein_coding	Wnt8b	ENSMUST00000237970	processed_transcript		19	1	44510321	826
ENSMUSG00000019984	protein_coding	Med23	ENSMUST00000176502	protein_coding		10	1	24876946	704
ENSMUSG00000041827	protein_coding	Oasl1	ENSMUST00000031540	protein_coding	principal1	5	1	114923240	2125
ENSMUSG00000019984	protein_coding	Med23	ENSMUST00000176285	protein_coding		10	1	24888451	3226
ENSMUSG00000071669	protein_coding	Snx29	ENSMUST00000151478	retained_intron		16	1	11445185	633
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000214873	protein_coding		9	-1	50528645	511
ENSMUSG00000019984	protein_coding	Med23	ENSMUST00000175786	retained_intron		10	1	24890967	368
ENSMUSG00000059534	protein_coding	Uqcr10	ENSMUST00000151559	processed_transcript		11	-1	4704334	510
ENSMUSG00000059534	protein_coding	Uqcr10	ENSMUST00000130236	processed_transcript		11	-1	4704053	389
ENSMUSG00000071669	protein_coding	Snx29	ENSMUST00000134941	retained_intron		16	1	11447308	1515
ENSMUSG00000099999	unprocessed_pseudogene	Gm21795	ENSMUST00000187263	unprocessed_pseudogene		Y	1	35503065	696
ENSMUSG00000071669	protein_coding	Snx29	ENSMUST00000115814	protein_coding		16	1	11322972	1125
ENSMUSG00000110245	TEC	Gm20100	ENSMUST00000209418	TEC		8	-1	11459742	2272
ENSMUSG00000083018	processed_pseudogene	Gm13555	ENSMUST00000121668	processed_pseudogene		2	-1	61970672	319
ENSMUSG00000041827	protein_coding	Oasl1	ENSMUST00000112143	protein_coding	principal1	5	1	114923264	2181
ENSMUSG00000030373	protein_coding	Psg28	ENSMUST00000019291	protein_coding	principal1	7	-1	18432041	1949
ENSMUSG00000041827	protein_coding	Oasl1	ENSMUST00000155394	processed_transcript		5	1	114923422	567
ENSMUSG00000041827	protein_coding	Oasl1	ENSMUST00000140159	processed_transcript		5	1	114923435	769
ENSMUSG00000041827	protein_coding	Oasl1	ENSMUST00000152329	retained_intron		5	1	114929849	800
ENSMUSG00000082639	protein_coding	Gm2012	ENSMUST00000121900	protein_coding	principal1	X	-1	26231355	1131
ENSMUSG00000041827	protein_coding	Oasl1	ENSMUST00000155274	processed_transcript		5	1	114936025	682
ENSMUSG00000019774	protein_coding	Mtrf1l	ENSMUST00000019908	protein_coding	principal1	10	-1	5823910	2588
ENSMUSG00000031504	protein_coding	Rab20	ENSMUST00000033900	protein_coding	principal1	8	-1	11478710	1392
ENSMUSG00000027709	protein_coding	Mccc1	ENSMUST00000199113	nonsense_mediated_decay		3	-1	36000609	2934
ENSMUSG00000082639	protein_coding	Gm2012	ENSMUST00000163263	protein_coding	principal1	X	-1	26231323	892
ENSMUSG00000026548	protein_coding	Slamf9	ENSMUST00000027830	protein_coding	principal1	1	1	172475358	1313
ENSMUSG00000019774	protein_coding	Mtrf1l	ENSMUST00000145718	processed_transcript		10	-1	5815755	536
ENSMUSG00000096957	bidirectional_promoter_lncRNA	E230013L22Rik	ENSMUST00000180408	bidirectional_promoter_lncRNA		8	1	11477929	1856
ENSMUSG00000019774	protein_coding	Mtrf1l	ENSMUST00000145687	processed_transcript		10	-1	5823546	688
ENSMUSG00000035191	protein_coding	Rfpl4	ENSMUST00000179971	protein_coding	principal2	7	-1	5116911	1445
ENSMUSG00000024300	protein_coding	Myo1f	ENSMUST00000087605	protein_coding	principal1	17	1	33555707	3831
ENSMUSG00000115920	processed_pseudogene	Gm18283	ENSMUST00000230695	processed_pseudogene		15	-1	76935060	1356
ENSMUSG00000026979	protein_coding	Psd4	ENSMUST00000140547	protein_coding		2	1	24367580	460
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000214213	processed_transcript		9	-1	50528640	589
ENSMUSG00000050919	protein_coding	Zfp366	ENSMUST00000056558	protein_coding	principal1	13	1	99184823	6382
ENSMUSG00000021509	protein_coding	Slc25a48	ENSMUST00000021971	protein_coding	principal1	13	1	56438355	3374
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000214512	processed_transcript		9	-1	50528645	592
ENSMUSG00000028148	protein_coding	Them5	ENSMUST00000029794	protein_coding	principal1	3	1	94342099	1251
ENSMUSG00000057841	protein_coding	Rpl32	ENSMUST00000081840	protein_coding	principal1	6	-1	115808747	517
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000213144	protein_coding		9	-1	50528658	379
ENSMUSG00000035191	protein_coding	Rfpl4	ENSMUST00000045215	protein_coding	principal2	7	-1	5116911	1598
ENSMUSG00000028148	protein_coding	Them5	ENSMUST00000198083	protein_coding		3	1	94342259	1378
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000216836	processed_transcript		9	-1	50528638	615
ENSMUSG00000048701	protein_coding	Ccdc6	ENSMUST00000147545	protein_coding	principal1	10	1	70097121	5511
ENSMUSG00000057841	protein_coding	Rpl32	ENSMUST00000203816	protein_coding	principal1	6	-1	115808348	906
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000216201	retained_intron		9	-1	50528646	824
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000111240	protein_coding		2	-1	94010807	1395
ENSMUSG00000109818	processed_pseudogene	Gm35713	ENSMUST00000210516	processed_pseudogene		8	1	63933164	199
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000156110	protein_coding		5	-1	108591671	2269
ENSMUSG00000058435	protein_coding	Btnl4	ENSMUST00000236448	processed_transcript		17	-1	34477318	1181
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000216197	retained_intron		9	-1	50528695	430
ENSMUSG00000024300	protein_coding	Myo1f	ENSMUST00000173372	nonsense_mediated_decay		17	1	33555745	3800
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000130403	processed_transcript		2	-1	93981626	460
ENSMUSG00000048701	protein_coding	Ccdc6	ENSMUST00000145990	retained_intron		10	1	70174509	706
ENSMUSG00000032067	protein_coding	Pts	ENSMUST00000214907	retained_intron		9	-1	50528641	437
ENSMUSG00000048701	protein_coding	Ccdc6	ENSMUST00000156001	protein_coding		10	1	70175011	630
ENSMUSG00000035191	protein_coding	Rfpl4	ENSMUST00000208468	protein_coding	alternative2	7	-1	5116950	1238
ENSMUSG00000024300	protein_coding	Myo1f	ENSMUST00000174695	protein_coding		17	1	33555765	382
ENSMUSG00000105559	processed_pseudogene	Gm4860	ENSMUST00000200368	processed_pseudogene		3	1	134963121	454
ENSMUSG00000101806	unprocessed_pseudogene	Gm28261	ENSMUST00000186417	unprocessed_pseudogene		Y	1	35539957	615
ENSMUSG00000080727	antisense	C920021L13Rik	ENSMUST00000142433	antisense		3	1	95871522	1330
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000138046	processed_transcript		2	-1	94010431	825
ENSMUSG00000048701	protein_coding	Ccdc6	ENSMUST00000135607	protein_coding		10	1	70175047	719
ENSMUSG00000101632	lincRNA	Gm28264	ENSMUST00000190657	lincRNA		Y	-1	35553266	398
ENSMUSG00000080727	antisense	C920021L13Rik	ENSMUST00000120398	antisense		3	1	95871525	1723
ENSMUSG00000106569	processed_pseudogene	Gm43036	ENSMUST00000200594	processed_pseudogene		3	1	134965858	373
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000127231	processed_transcript		2	-1	94005187	705
ENSMUSG00000094443	protein_coding	Sgo2b	ENSMUST00000210915	transcribed_unprocessed_pseudogene		8	-1	63952248	3817
ENSMUSG00000104539	processed_pseudogene	Gm43035	ENSMUST00000197626	processed_pseudogene		3	1	134971457	517
ENSMUSG00000099525	unprocessed_pseudogene	Gm21872	ENSMUST00000191488	unprocessed_pseudogene		Y	1	35569482	678
ENSMUSG00000117088	processed_pseudogene	Gm49875	ENSMUST00000232896	processed_pseudogene		17	1	73447654	422
ENSMUSG00000024300	protein_coding	Myo1f	ENSMUST00000173426	retained_intron		17	1	33582603	3667
ENSMUSG00000105538	processed_pseudogene	Gm2142	ENSMUST00000197899	processed_pseudogene		3	1	135121861	589
ENSMUSG00000080727	antisense	C920021L13Rik	ENSMUST00000143306	antisense		3	1	95871531	353
ENSMUSG00000024300	protein_coding	Myo1f	ENSMUST00000235099	retained_intron		17	1	33598141	507
ENSMUSG00000105266	processed_pseudogene	Gm18546	ENSMUST00000197245	processed_pseudogene		3	1	135170629	676
ENSMUSG00000058435	protein_coding	Btnl4	ENSMUST00000065841	protein_coding	principal1	17	-1	34475937	1761
ENSMUSG00000094443	protein_coding	Sgo2b	ENSMUST00000179944	protein_coding	principal1	8	-1	63952170	3739
ENSMUSG00000082617	processed_pseudogene	Smt3h2-ps	ENSMUST00000121084	processed_pseudogene		X	1	7752130	285
ENSMUSG00000106079	processed_pseudogene	Gm43033	ENSMUST00000199682	processed_pseudogene		3	1	135208987	425
ENSMUSG00000027598	protein_coding	Itch	ENSMUST00000126648	retained_intron		2	1	155133509	1171
ENSMUSG00000103253	TEC	Gm37520	ENSMUST00000194883	TEC		2	-1	11193312	2672
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000126378	protein_coding		2	-1	94010754	897
ENSMUSG00000103774	TEC	Gm36932	ENSMUST00000195226	TEC		2	1	11181012	929
ENSMUSG00000020630	protein_coding	Rnaseh1	ENSMUST00000020959	protein_coding	principal1	12	1	28649602	1455
ENSMUSG00000021559	protein_coding	Dapk1	ENSMUST00000226059	protein_coding		13	1	60601947	5009
ENSMUSG00000037847	protein_coding	Nmrk1	ENSMUST00000042392	protein_coding	principal2	19	1	18631950	1357
ENSMUSG00000111654	antisense	Gm47077	ENSMUST00000216563	antisense		9	1	50528767	524
ENSMUSG00000020630	protein_coding	Rnaseh1	ENSMUST00000223322	nonsense_mediated_decay		12	1	28649624	1368
ENSMUSG00000106767	TEC	Gm42727	ENSMUST00000202446	TEC		5	1	65616949	2823
ENSMUSG00000037337	protein_coding	Map4k1	ENSMUST00000208227	protein_coding		7	1	28982050	2720
ENSMUSG00000107050	TEC	C030017G13Rik	ENSMUST00000202959	TEC		5	-1	65682344	2331
ENSMUSG00000020630	protein_coding	Rnaseh1	ENSMUST00000222767	retained_intron		12	1	28653117	382
ENSMUSG00000037847	protein_coding	Nmrk1	ENSMUST00000237347	protein_coding	principal2	19	1	18631950	1940
ENSMUSG00000020630	protein_coding	Rnaseh1	ENSMUST00000221496	retained_intron		12	1	28653652	1970
ENSMUSG00000021559	protein_coding	Dapk1	ENSMUST00000077453	protein_coding	principal1	13	1	60601957	5491
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000138107	processed_transcript		2	-1	94010754	428
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000156763	processed_transcript		2	-1	94010752	965
ENSMUSG00000037847	protein_coding	Nmrk1	ENSMUST00000161080	nonsense_mediated_decay		19	1	18631959	915
ENSMUSG00000037847	protein_coding	Nmrk1	ENSMUST00000162446	retained_intron		19	1	18631962	1341
ENSMUSG00000037847	protein_coding	Nmrk1	ENSMUST00000159572	protein_coding	alternative2	19	1	18631998	1768
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000130289	processed_transcript		2	-1	94010752	765
ENSMUSG00000037337	protein_coding	Map4k1	ENSMUST00000085835	protein_coding	principal1	7	1	28982828	2724
ENSMUSG00000037477	protein_coding	Tbx10	ENSMUST00000041871	protein_coding	principal1	19	1	3992752	1778
ENSMUSG00000040174	protein_coding	Alkbh3	ENSMUST00000040005	protein_coding	principal1	2	-1	94010730	1228
ENSMUSG00000052819	protein_coding	Best2	ENSMUST00000209322	protein_coding	principal1	8	-1	85013591	1944
ENSMUSG00000030319	protein_coding	Cand2	ENSMUST00000075995	protein_coding	principal1	6	1	115774538	5474
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000144458	protein_coding	principal3	8	1	119910360	3726
ENSMUSG00000060681	protein_coding	Slc9a6	ENSMUST00000144068	protein_coding		X	1	56609757	1061
ENSMUSG00000037337	protein_coding	Map4k1	ENSMUST00000207185	nonsense_mediated_decay		7	1	28982861	2764
ENSMUSG00000027709	protein_coding	Mccc1	ENSMUST00000029259	protein_coding	principal1	3	-1	36000678	2455
ENSMUSG00000104505	lincRNA	Gm37739	ENSMUST00000191742	lincRNA		Y	-1	12516809	1505
ENSMUSG00000087006	protein_coding	Gm13889	ENSMUST00000148314	protein_coding	principal1	2	-1	93957049	1240
ENSMUSG00000107103	TEC	Gm43164	ENSMUST00000202529	TEC		6	-1	33692154	2128
ENSMUSG00000087006	protein_coding	Gm13889	ENSMUST00000099689	protein_coding		2	-1	93957201	1386
ENSMUSG00000037337	protein_coding	Map4k1	ENSMUST00000208784	retained_intron		7	1	29001542	523
ENSMUSG00000107358	TEC	Gm43168	ENSMUST00000201039	TEC		6	1	33433008	1612
ENSMUSG00000032066	protein_coding	Bco2	ENSMUST00000119103	protein_coding	principal1	9	-1	50555181	2118
ENSMUSG00000072589	antisense	Gm10371	ENSMUST00000127429	antisense		14	-1	47116161	1411
ENSMUSG00000027709	protein_coding	Mccc1	ENSMUST00000200552	retained_intron		3	-1	35961109	468
ENSMUSG00000072589	antisense	Gm10371	ENSMUST00000228010	antisense		14	-1	47116071	1081
ENSMUSG00000104505	lincRNA	Gm37739	ENSMUST00000191901	lincRNA		Y	-1	12516355	621
ENSMUSG00000098004	protein_coding	Gm27027	ENSMUST00000183110	protein_coding	principal1	2	-1	93996354	547
ENSMUSG00000104505	lincRNA	Gm37739	ENSMUST00000193731	lincRNA		Y	-1	12516355	437
ENSMUSG00000027709	protein_coding	Mccc1	ENSMUST00000199092	retained_intron		3	-1	35969111	6751
ENSMUSG00000114996	TEC	Gm48958	ENSMUST00000228844	TEC		14	1	46893520	2964
ENSMUSG00000080820	processed_pseudogene	Gm13197	ENSMUST00000117204	processed_pseudogene		2	1	5283650	225
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000108988	protein_coding	alternative2	8	1	119910814	3274
ENSMUSG00000052819	protein_coding	Best2	ENSMUST00000059072	protein_coding	principal1	8	-1	85014408	1971
ENSMUSG00000089870	sense_intronic	Gm15562	ENSMUST00000161397	sense_intronic		14	1	46961440	426
ENSMUSG00000104468	unprocessed_pseudogene	Gm21736	ENSMUST00000195399	unprocessed_pseudogene		Y	1	12564103	693
ENSMUSG00000032883	protein_coding	Acsl3	ENSMUST00000035779	protein_coding	principal1	1	1	78657825	3950
ENSMUSG00000052819	protein_coding	Best2	ENSMUST00000209421	protein_coding	principal1	8	-1	85014531	2212
ENSMUSG00000094135	TEC	Gm21379	ENSMUST00000179772	TEC		Y	1	12688110	1955
ENSMUSG00000059657	protein_coding	Stfa2l1	ENSMUST00000079184	protein_coding	principal1	16	1	36156811	419
ENSMUSG00000027709	protein_coding	Mccc1	ENSMUST00000198515	retained_intron		3	-1	35995879	2114
ENSMUSG00000027709	protein_coding	Mccc1	ENSMUST00000197580	retained_intron		3	-1	35976587	821
ENSMUSG00000027709	protein_coding	Mccc1	ENSMUST00000200163	nonsense_mediated_decay		3	-1	35989932	802
ENSMUSG00000039470	protein_coding	Zdhhc2	ENSMUST00000049389	protein_coding	principal1	8	1	40423815	3381
ENSMUSG00000079597	protein_coding	Cstdc4	ENSMUST00000231731	retained_intron		16	1	36184212	1859
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000023749	protein_coding	principal2	15	1	99392882	2452
ENSMUSG00000027709	protein_coding	Mccc1	ENSMUST00000200162	nonsense_mediated_decay		3	-1	36000641	757
ENSMUSG00000085276	processed_pseudogene	Gm15812	ENSMUST00000162331	processed_pseudogene		13	-1	42869602	748
ENSMUSG00000032065	protein_coding	Tex12	ENSMUST00000217236	protein_coding	principal1	9	-1	50561325	1003
ENSMUSG00000079597	protein_coding	Cstdc4	ENSMUST00000114858	protein_coding	principal1	16	1	36184212	414
ENSMUSG00000032883	protein_coding	Acsl3	ENSMUST00000134566	protein_coding		1	1	78657883	2492
ENSMUSG00000112466	lincRNA	Gm29674	ENSMUST00000220167	lincRNA		10	-1	107205775	2006
ENSMUSG00000039470	protein_coding	Zdhhc2	ENSMUST00000131672	retained_intron		8	1	40423822	2848
ENSMUSG00000038550	protein_coding	Ciart	ENSMUST00000159739	protein_coding	principal1	3	-1	95882205	1939
ENSMUSG00000112466	lincRNA	Gm29674	ENSMUST00000218791	lincRNA		10	-1	107205727	1139
ENSMUSG00000032883	protein_coding	Acsl3	ENSMUST00000142704	protein_coding	principal1	1	1	78657883	2976
ENSMUSG00000039470	protein_coding	Zdhhc2	ENSMUST00000128166	protein_coding	principal1	8	1	40423821	1547
ENSMUSG00000021559	protein_coding	Dapk1	ENSMUST00000224340	retained_intron		13	1	60602054	4072
ENSMUSG00000032065	protein_coding	Tex12	ENSMUST00000034568	protein_coding	principal1	9	-1	50561310	895
ENSMUSG00000112466	lincRNA	Gm29674	ENSMUST00000219664	lincRNA		10	-1	107205574	4083
ENSMUSG00000039470	protein_coding	Zdhhc2	ENSMUST00000164934	processed_transcript		8	1	40500451	247
ENSMUSG00000032883	protein_coding	Acsl3	ENSMUST00000135642	protein_coding		1	1	78670893	502
ENSMUSG00000116872	transcribed_unprocessed_pseudogene	Gm6815	ENSMUST00000231778	processed_transcript		16	-1	36197886	3038
ENSMUSG00000116872	transcribed_unprocessed_pseudogene	Gm6815	ENSMUST00000232565	transcribed_unprocessed_pseudogene		16	-1	36198129	2594
ENSMUSG00000039470	protein_coding	Zdhhc2	ENSMUST00000168799	processed_transcript		8	1	40424104	287
ENSMUSG00000032883	protein_coding	Acsl3	ENSMUST00000132997	retained_intron		1	1	78681940	627
ENSMUSG00000109478	lincRNA	Gm39078	ENSMUST00000207973	lincRNA		7	-1	119604780	704
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000143615	processed_transcript		8	1	119910833	2129
ENSMUSG00000033318	protein_coding	Gstt2	ENSMUST00000220440	protein_coding	principal1	10	-1	75837367	2254
ENSMUSG00000042613	protein_coding	Pbxip1	ENSMUST00000038942	protein_coding	principal1	3	1	89436706	4479
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000108982	protein_coding		8	1	119910857	559
ENSMUSG00000039470	protein_coding	Zdhhc2	ENSMUST00000167766	protein_coding	principal1	8	1	40423840	1759
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000160635	protein_coding	principal2	15	1	99392986	871
ENSMUSG00000021559	protein_coding	Dapk1	ENSMUST00000044083	protein_coding	principal1	13	1	60602211	5304
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000211935	retained_intron		8	1	119937682	3723
ENSMUSG00000047696	protein_coding	Ccdc144b	ENSMUST00000200469	protein_coding	principal1	3	-1	36053547	2481
ENSMUSG00000029754	protein_coding	Dlx6	ENSMUST00000160937	protein_coding	principal1	6	1	6863334	2216
ENSMUSG00000078097	processed_pseudogene	Gm10913	ENSMUST00000133732	processed_pseudogene		16	1	36209277	463
ENSMUSG00000033318	protein_coding	Gstt2	ENSMUST00000218500	protein_coding		10	-1	75834383	794
ENSMUSG00000032883	protein_coding	Acsl3	ENSMUST00000154777	retained_intron		1	1	78690263	742
ENSMUSG00000106884	processed_pseudogene	Gm20156	ENSMUST00000200877	processed_pseudogene		5	-1	41935672	1276
ENSMUSG00000021559	protein_coding	Dapk1	ENSMUST00000225632	retained_intron		13	1	60602232	485
ENSMUSG00000033318	protein_coding	Gstt2	ENSMUST00000218034	retained_intron		10	-1	75833136	686
ENSMUSG00000032883	protein_coding	Acsl3	ENSMUST00000148608	retained_intron		1	1	78696656	643
ENSMUSG00000042613	protein_coding	Pbxip1	ENSMUST00000141340	processed_transcript		3	1	89436712	450
ENSMUSG00000021559	protein_coding	Dapk1	ENSMUST00000224789	nonsense_mediated_decay		13	1	60696413	580
ENSMUSG00000033318	protein_coding	Gstt2	ENSMUST00000220195	protein_coding		10	-1	75834479	739
ENSMUSG00000047696	protein_coding	Ccdc144b	ENSMUST00000196964	nonsense_mediated_decay		3	-1	36053532	5930
ENSMUSG00000038550	protein_coding	Ciart	ENSMUST00000036418	protein_coding	principal1	3	-1	95882231	1398
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000135210	processed_transcript		8	1	119944078	467
ENSMUSG00000076532	IG_V_gene	Igkv4-91	ENSMUST00000103333	IG_V_gene	principal1	6	-1	68769103	358
ENSMUSG00000029754	protein_coding	Dlx6	ENSMUST00000031768	protein_coding		6	1	6863797	605
ENSMUSG00000047696	protein_coding	Ccdc144b	ENSMUST00000166644	protein_coding	principal1	3	-1	36053532	1685
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000107885	protein_coding	alternative2	7	1	44848991	1812
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000212612	retained_intron		8	1	119946400	761
ENSMUSG00000021559	protein_coding	Dapk1	ENSMUST00000225952	retained_intron		13	1	60753996	656
ENSMUSG00000033318	protein_coding	Gstt2	ENSMUST00000219343	processed_transcript		10	-1	75834479	416
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000142432	retained_intron		8	1	119948303	665
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000142880	protein_coding		7	1	44849295	333
ENSMUSG00000029754	protein_coding	Dlx6	ENSMUST00000172943	retained_intron		6	1	6863798	383
ENSMUSG00000094733	protein_coding	Csta3	ENSMUST00000089628	protein_coding	principal1	16	1	36210403	294
ENSMUSG00000027598	protein_coding	Itch	ENSMUST00000155360	retained_intron		2	1	155133509	1070
ENSMUSG00000033318	protein_coding	Gstt2	ENSMUST00000218646	retained_intron		10	-1	75834463	632
ENSMUSG00000039217	protein_coding	Il18	ENSMUST00000213916	protein_coding		9	1	50554827	885
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000125066	retained_intron		8	1	119948414	747
ENSMUSG00000033318	protein_coding	Gstt2	ENSMUST00000218745	retained_intron		10	-1	75837424	1449
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000161250	protein_coding	principal2	15	1	99392986	1148
ENSMUSG00000042613	protein_coding	Pbxip1	ENSMUST00000130858	protein_coding		3	1	89436715	847
ENSMUSG00000114501	TEC	Gm48582	ENSMUST00000225376	TEC		13	1	60622967	6429
ENSMUSG00000029754	protein_coding	Dlx6	ENSMUST00000171311	protein_coding	principal1	6	1	6863334	1071
ENSMUSG00000114277	processed_pseudogene	Gm48583	ENSMUST00000225897	processed_pseudogene		13	1	60641790	220
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000137310	retained_intron		8	1	119951963	831
ENSMUSG00000042613	protein_coding	Pbxip1	ENSMUST00000146630	protein_coding		3	1	89436754	678
ENSMUSG00000038550	protein_coding	Ciart	ENSMUST00000161866	protein_coding		3	-1	95882251	710
ENSMUSG00000067285	protein_coding	Gm16223	ENSMUST00000087332	protein_coding	principal1	5	1	42067960	2530
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000152091	retained_intron		7	1	44849344	2207
ENSMUSG00000107967	TEC	Gm44094	ENSMUST00000204703	TEC		6	-1	6856251	2030
ENSMUSG00000033318	protein_coding	Gstt2	ENSMUST00000038257	protein_coding	principal1	10	-1	75834881	1370
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000148767	retained_intron		8	1	119952652	717
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000229392	protein_coding	alternative2	15	1	99393004	577
ENSMUSG00000081460	processed_pseudogene	Gm13168	ENSMUST00000121771	processed_pseudogene		4	1	146263559	632
ENSMUSG00000106813	processed_pseudogene	Gm7181	ENSMUST00000202197	processed_pseudogene		5	-1	42500414	434
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000150335	protein_coding		7	1	44849581	485
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000134729	protein_coding		8	1	119953275	424
ENSMUSG00000042613	protein_coding	Pbxip1	ENSMUST00000145753	protein_coding		3	1	89436756	699
ENSMUSG00000038550	protein_coding	Ciart	ENSMUST00000161867	protein_coding		3	-1	95881246	609
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000161778	protein_coding		15	1	99393022	901
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000107882	protein_coding	alternative2	7	1	44849629	1160
ENSMUSG00000102500	TEC	Gm37371	ENSMUST00000194837	TEC		1	1	140823327	392
ENSMUSG00000031826	protein_coding	Usp10	ENSMUST00000139648	processed_transcript		8	1	119956206	459
ENSMUSG00000090063	antisense	Dlx6os1	ENSMUST00000159827	antisense		6	-1	6861591	4446
ENSMUSG00000038550	protein_coding	Ciart	ENSMUST00000159863	protein_coding		3	-1	95882203	372
ENSMUSG00000076533	IG_V_gene	Igkv4-90	ENSMUST00000103334	IG_V_gene	principal1	6	-1	68807708	352
ENSMUSG00000085525	lincRNA	Gm13166	ENSMUST00000123828	lincRNA		4	1	146251829	940
ENSMUSG00000086392	antisense	Mccc1os	ENSMUST00000137198	antisense		3	1	35999833	2686
ENSMUSG00000101372	processed_pseudogene	Gm19028	ENSMUST00000189614	processed_pseudogene		1	1	27989910	1873
ENSMUSG00000106622	processed_pseudogene	Gm5554	ENSMUST00000199726	processed_pseudogene		5	-1	42964609	1206
ENSMUSG00000095238	processed_pseudogene	Gm4845	ENSMUST00000179202	processed_pseudogene		1	-1	141257157	562
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000141311	protein_coding		7	1	44850007	835
ENSMUSG00000103509	TEC	Gm38372	ENSMUST00000194854	TEC		1	1	7148110	4028
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000159209	protein_coding	principal2	15	1	99393219	944
ENSMUSG00000038550	protein_coding	Ciart	ENSMUST00000161994	protein_coding		3	-1	95882074	646
ENSMUSG00000103241	TEC	Gm38089	ENSMUST00000193585	TEC		1	1	28569918	1514
ENSMUSG00000039217	protein_coding	Il18	ENSMUST00000214117	protein_coding	principal2	9	1	50565374	860
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000201948	protein_coding	principal1	5	-1	65698168	8934
ENSMUSG00000102740	TEC	Gm37599	ENSMUST00000193067	TEC		1	1	141356789	489
ENSMUSG00000098201	processed_pseudogene	Gm26983	ENSMUST00000182051	processed_pseudogene		1	-1	7136586	388
ENSMUSG00000086392	antisense	Mccc1os	ENSMUST00000144118	antisense		3	1	35999913	4451
ENSMUSG00000079470	protein_coding	Utp14b	ENSMUST00000053760	protein_coding	principal1	1	1	78658038	7393
ENSMUSG00000109200	lincRNA	Gm44969	ENSMUST00000207829	lincRNA		7	-1	47144322	549
ENSMUSG00000107193	lincRNA	Gm43700	ENSMUST00000200967	lincRNA		5	-1	43038236	316
ENSMUSG00000104147	TEC	Gm37142	ENSMUST00000193718	TEC		1	-1	141423146	3110
ENSMUSG00000090063	antisense	Dlx6os1	ENSMUST00000159568	antisense		6	-1	6871592	4608
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000162624	protein_coding		15	1	99393592	781
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000201673	retained_intron		5	-1	65611773	6051
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000019226	protein_coding	principal1	7	-1	141437892	2811
ENSMUSG00000086240	processed_pseudogene	Gm7846	ENSMUST00000145844	processed_pseudogene		1	-1	28580772	274
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000159531	protein_coding	principal2	15	1	99393610	939
ENSMUSG00000085525	lincRNA	Gm13166	ENSMUST00000154592	lincRNA		4	1	146252173	280
ENSMUSG00000104849	IG_V_pseudogene	Gm42924	ENSMUST00000197261	IG_V_pseudogene		6	1	68810669	185
ENSMUSG00000090063	antisense	Dlx6os1	ENSMUST00000210702	antisense		6	-1	6830791	524
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000202648	protein_coding		5	-1	65620600	2725
ENSMUSG00000001700	protein_coding	Gramd3	ENSMUST00000237355	protein_coding	principal2	18	1	56400337	2629
ENSMUSG00000086392	antisense	Mccc1os	ENSMUST00000124469	antisense		3	1	36000435	3353
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000162274	protein_coding		15	1	99401085	621
ENSMUSG00000106501	lincRNA	Gm42711	ENSMUST00000197060	lincRNA		5	-1	43044061	2302
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000201987	retained_intron		5	-1	65622548	2443
ENSMUSG00000039217	protein_coding	Il18	ENSMUST00000180021	protein_coding	principal2	9	1	50575273	702
ENSMUSG00000105416	TEC	Gm42553	ENSMUST00000196390	TEC		5	1	43059255	1629
ENSMUSG00000085525	lincRNA	Gm13166	ENSMUST00000146671	lincRNA		4	1	146270331	314
ENSMUSG00000052303	protein_coding	Mrgpra6	ENSMUST00000186456	protein_coding		7	-1	47204920	1090
ENSMUSG00000085525	lincRNA	Gm13166	ENSMUST00000144166	lincRNA		4	1	146270331	326
ENSMUSG00000001700	protein_coding	Gramd3	ENSMUST00000237422	protein_coding	alternative2	18	1	56400375	2353
ENSMUSG00000094868	TEC	Dlx6os2	ENSMUST00000178206	TEC		6	-1	6865150	1354
ENSMUSG00000085525	lincRNA	Gm13166	ENSMUST00000124975	lincRNA		4	1	146270372	282
ENSMUSG00000039217	protein_coding	Il18	ENSMUST00000059081	protein_coding	alternative2	9	1	50575273	702
ENSMUSG00000079470	protein_coding	Utp14b	ENSMUST00000151622	protein_coding	principal1	1	1	78658440	3685
ENSMUSG00000095096	unprocessed_pseudogene	Vmn2r-ps17	ENSMUST00000178733	unprocessed_pseudogene		4	1	146264521	375
ENSMUSG00000052303	protein_coding	Mrgpra6	ENSMUST00000073793	protein_coding	principal1	7	-1	47189416	1016
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000107880	protein_coding	principal3	7	1	44850007	1757
ENSMUSG00000085655	antisense	Gm15952	ENSMUST00000122858	antisense		3	1	35933045	490
ENSMUSG00000101511	unprocessed_pseudogene	Gm5681	ENSMUST00000189217	unprocessed_pseudogene		17	-1	21060776	1533
ENSMUSG00000076534	IG_V_gene	Igkv12-89	ENSMUST00000199143	IG_V_gene	principal5	6	-1	68835307	338
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000231147	retained_intron		15	1	99404489	689
ENSMUSG00000085655	antisense	Gm15952	ENSMUST00000196662	antisense		3	1	35933045	334
ENSMUSG00000076534	IG_V_gene	Igkv12-89	ENSMUST00000103335	IG_V_gene	alternative2	6	-1	68835307	335
ENSMUSG00000093453	unprocessed_pseudogene	Vmn1r-ps146	ENSMUST00000176131	unprocessed_pseudogene		17	-1	21080658	525
ENSMUSG00000074111	protein_coding	Mrgpra9	ENSMUST00000179005	protein_coding	principal2	7	-1	47252828	1090
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000208384	protein_coding		7	1	44850042	392
ENSMUSG00000105087	TEC	Gm42552	ENSMUST00000196754	TEC		5	-1	43148327	4497
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000160454	retained_intron		15	1	99405874	852
ENSMUSG00000085655	antisense	Gm15952	ENSMUST00000144542	antisense		3	1	35933057	556
ENSMUSG00000043855	protein_coding	Olfr479	ENSMUST00000214599	protein_coding	principal1	7	1	108050693	3248
ENSMUSG00000105556	TEC	Gm43080	ENSMUST00000199006	TEC		3	-1	35972026	2643
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000136232	protein_coding		7	1	44850396	332
ENSMUSG00000023010	protein_coding	Tmbim6	ENSMUST00000231173	protein_coding		15	1	99407267	888
ENSMUSG00000101000	processed_pseudogene	Gm5371	ENSMUST00000186275	processed_pseudogene		9	-1	97210880	1577
ENSMUSG00000113318	processed_pseudogene	Gm18113	ENSMUST00000220630	processed_pseudogene		12	-1	69370023	303
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000207223	protein_coding		7	1	44850445	212
ENSMUSG00000074111	protein_coding	Mrgpra9	ENSMUST00000098436	protein_coding	alternative2	7	-1	47252848	1049
ENSMUSG00000043855	protein_coding	Olfr479	ENSMUST00000209805	protein_coding	principal1	7	1	108050693	2902
ENSMUSG00000101953	processed_pseudogene	Gm29241	ENSMUST00000189260	processed_pseudogene		9	-1	97228895	1096
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000127783	protein_coding		7	1	44852571	750
ENSMUSG00000026979	protein_coding	Psd4	ENSMUST00000102942	protein_coding	principal1	2	1	24367610	11265
ENSMUSG00000099444	processed_pseudogene	Gm29240	ENSMUST00000187248	processed_pseudogene		9	-1	97234100	286
ENSMUSG00000043855	protein_coding	Olfr479	ENSMUST00000063151	protein_coding	principal1	7	1	108054957	1111
ENSMUSG00000011096	protein_coding	Akt1s1	ENSMUST00000054343	protein_coding	principal3	7	1	44849224	1592
ENSMUSG00000104167	TEC	A030012G06Rik	ENSMUST00000192385	TEC		9	1	97289186	1880
ENSMUSG00000092412	processed_transcript	Gm20507	ENSMUST00000163245	processed_transcript		17	1	33630759	2860
ENSMUSG00000095620	protein_coding	Csta2	ENSMUST00000187183	protein_coding	principal1	16	1	36221468	639
ENSMUSG00000095620	protein_coding	Csta2	ENSMUST00000187742	protein_coding	principal1	16	1	36221562	466
ENSMUSG00000001700	protein_coding	Gramd3	ENSMUST00000235794	processed_transcript		18	1	56419170	1584
ENSMUSG00000095620	protein_coding	Csta2	ENSMUST00000063539	protein_coding	principal1	16	1	36253046	294
ENSMUSG00000087167	antisense	Gm15891	ENSMUST00000127307	antisense		9	1	97349616	611
ENSMUSG00000026979	protein_coding	Psd4	ENSMUST00000056641	protein_coding	principal1	2	1	24385332	4748
ENSMUSG00000001700	protein_coding	Gramd3	ENSMUST00000237716	retained_intron		18	1	56469267	3746
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000200766	retained_intron		5	-1	65650416	1974
ENSMUSG00000048411	protein_coding	Gm597	ENSMUST00000059937	protein_coding	principal1	1	-1	28780252	2887
ENSMUSG00000044147	protein_coding	Arf6	ENSMUST00000050063	protein_coding	principal1	12	1	69372150	1534
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000202107	retained_intron		5	-1	65628600	1504
ENSMUSG00000091550	unprocessed_pseudogene	Gm6811	ENSMUST00000169389	unprocessed_pseudogene		17	1	21093172	1533
ENSMUSG00000051285	protein_coding	Pcmtd1	ENSMUST00000061280	protein_coding	principal1	1	1	7088920	5232
ENSMUSG00000038543	protein_coding	BC028528	ENSMUST00000090476	protein_coding	principal3	3	-1	95892005	809
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000202910	retained_intron		5	-1	65629618	3008
ENSMUSG00000052673	antisense	Gm9887	ENSMUST00000238276	antisense		12	-1	69372468	1985
ENSMUSG00000026979	protein_coding	Psd4	ENSMUST00000142522	protein_coding		2	1	24385335	679
ENSMUSG00000052673	antisense	Gm9887	ENSMUST00000053451	antisense		12	-1	69372458	624
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000201420	retained_intron		5	-1	65630049	800
ENSMUSG00000001700	protein_coding	Gramd3	ENSMUST00000070166	protein_coding	principal2	18	1	56432132	2605
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000201046	retained_intron		5	-1	65638916	521
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000201109	retained_intron		5	-1	65645101	3021
ENSMUSG00000051285	protein_coding	Pcmtd1	ENSMUST00000182114	protein_coding		1	1	7088930	770
ENSMUSG00000038543	protein_coding	BC028528	ENSMUST00000036360	protein_coding	alternative2	3	-1	95891955	752
ENSMUSG00000026979	protein_coding	Psd4	ENSMUST00000133730	processed_transcript		2	1	24385336	475
ENSMUSG00000060681	protein_coding	Slc9a6	ENSMUST00000077741	protein_coding	principal1	X	1	56609775	4976
ENSMUSG00000102080	lincRNA	Gm5092	ENSMUST00000188185	lincRNA		17	1	21091208	1675
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000106007	protein_coding	principal1	7	-1	141434594	2546
ENSMUSG00000102080	lincRNA	Gm5092	ENSMUST00000232348	lincRNA		17	1	21100261	719
ENSMUSG00000051285	protein_coding	Pcmtd1	ENSMUST00000182306	processed_transcript		1	1	7089104	419
ENSMUSG00000076535	IG_V_gene	Igkv1-88	ENSMUST00000103336	IG_V_gene	principal1	6	-1	68863031	362
ENSMUSG00000051285	protein_coding	Pcmtd1	ENSMUST00000182823	processed_transcript		1	1	7089166	2659
ENSMUSG00000026979	protein_coding	Psd4	ENSMUST00000131930	protein_coding		2	1	24385353	632
ENSMUSG00000038697	protein_coding	Taf5l	ENSMUST00000093039	protein_coding	principal1	8	-1	124021008	2912
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000106006	protein_coding		7	-1	141437631	2277
ENSMUSG00000060681	protein_coding	Slc9a6	ENSMUST00000114784	protein_coding		X	1	56609817	4449
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000201710	protein_coding	principal1	7	-1	141437637	2565
ENSMUSG00000060681	protein_coding	Slc9a6	ENSMUST00000207892	protein_coding		X	1	56645848	619
ENSMUSG00000032451	protein_coding	Trim42	ENSMUST00000035026	protein_coding	principal1	9	-1	97369958	2463
ENSMUSG00000038543	protein_coding	BC028528	ENSMUST00000145949	processed_transcript		3	-1	95891951	551
ENSMUSG00000026979	protein_coding	Psd4	ENSMUST00000127242	protein_coding		2	1	24386569	711
ENSMUSG00000026979	protein_coding	Psd4	ENSMUST00000140303	nonsense_mediated_decay		2	1	24401036	305
ENSMUSG00000038543	protein_coding	BC028528	ENSMUST00000133611	retained_intron		3	-1	95891981	654
ENSMUSG00000060681	protein_coding	Slc9a6	ENSMUST00000202670	retained_intron		X	1	56658245	2774
ENSMUSG00000038697	protein_coding	Taf5l	ENSMUST00000165628	protein_coding	principal1	8	-1	124021397	2973
ENSMUSG00000026979	protein_coding	Psd4	ENSMUST00000132924	retained_intron		2	1	24405629	233
ENSMUSG00000051285	protein_coding	Pcmtd1	ENSMUST00000182675	nonsense_mediated_decay		1	1	7147637	1153
ENSMUSG00000026979	protein_coding	Psd4	ENSMUST00000166388	protein_coding	principal1	2	1	24386617	4181
ENSMUSG00000051285	protein_coding	Pcmtd1	ENSMUST00000182388	retained_intron		1	1	7154867	701
ENSMUSG00000038543	protein_coding	BC028528	ENSMUST00000171519	protein_coding	principal3	3	-1	95891930	447
ENSMUSG00000051285	protein_coding	Pcmtd1	ENSMUST00000182892	retained_intron		1	1	7160085	4207
ENSMUSG00000038697	protein_coding	Taf5l	ENSMUST00000212010	protein_coding		8	-1	124020940	661
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000200790	retained_intron		5	-1	65698273	2705
ENSMUSG00000109264	unprocessed_pseudogene	Gm44871	ENSMUST00000207821	unprocessed_pseudogene		7	-1	18436653	497
ENSMUSG00000074682	protein_coding	Zcchc3	ENSMUST00000099207	protein_coding	principal1	2	-1	152415027	3073
ENSMUSG00000038697	protein_coding	Taf5l	ENSMUST00000213055	retained_intron		8	-1	124021311	717
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000202698	retained_intron		5	-1	65655223	461
ENSMUSG00000113174	unprocessed_pseudogene	Gm9292	ENSMUST00000222008	unprocessed_pseudogene		12	-1	23115584	710
ENSMUSG00000051285	protein_coding	Pcmtd1	ENSMUST00000183204	retained_intron		1	1	7160557	3986
ENSMUSG00000109957	lincRNA	Gm45353	ENSMUST00000210581	lincRNA		8	1	122339171	252
ENSMUSG00000000078	protein_coding	Klf6	ENSMUST00000000080	protein_coding	principal1	13	1	5861482	4225
ENSMUSG00000026778	protein_coding	Prkcq	ENSMUST00000028118	protein_coding	principal1	2	1	11172108	3583
ENSMUSG00000097944	bidirectional_promoter_lncRNA	A130014A01Rik	ENSMUST00000183021	bidirectional_promoter_lncRNA		8	1	120101582	2323
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000201034	retained_intron		5	-1	65696865	462
ENSMUSG00000084072	unprocessed_pseudogene	Gm11285	ENSMUST00000118443	unprocessed_pseudogene		13	-1	22083787	322
ENSMUSG00000076770	TR_V_gene	Trav8d-1	ENSMUST00000103580	TR_V_gene	principal1	14	1	52778447	400
ENSMUSG00000113085	processed_pseudogene	Gm47383	ENSMUST00000220778	processed_pseudogene		12	1	23155957	108
ENSMUSG00000029202	protein_coding	Pds5a	ENSMUST00000031104	protein_coding	principal1	5	-1	65697856	4146
ENSMUSG00000052456	protein_coding	Asna1	ENSMUST00000064314	protein_coding	principal1	8	-1	85025281	1256
ENSMUSG00000105374	TEC	Gm42551	ENSMUST00000197701	TEC		5	1	43248185	1573
ENSMUSG00000113579	processed_pseudogene	Gm47384	ENSMUST00000220883	processed_pseudogene		12	-1	23166454	120
ENSMUSG00000000078	protein_coding	Klf6	ENSMUST00000222857	nonsense_mediated_decay		13	1	5861541	1115
ENSMUSG00000107158	TEC	Gm42728	ENSMUST00000202644	TEC		5	-1	65674160	1552
ENSMUSG00000000078	protein_coding	Klf6	ENSMUST00000221734	retained_intron		13	1	5864678	799
ENSMUSG00000108906	processed_pseudogene	Gm8314	ENSMUST00000208964	processed_pseudogene		7	-1	18456688	1858
ENSMUSG00000018076	protein_coding	Med13l	ENSMUST00000100816	protein_coding	principal3	5	1	118560719	9296
ENSMUSG00000106696	TEC	Gm42729	ENSMUST00000201770	TEC		5	1	65623934	2930
ENSMUSG00000090255	antisense	4921534H16Rik	ENSMUST00000162370	antisense		9	1	98003420	1392
ENSMUSG00000052456	protein_coding	Asna1	ENSMUST00000209834	nonsense_mediated_decay		8	-1	85025266	861
ENSMUSG00000118132	bidirectional_promoter_lncRNA	4833408A19Rik	ENSMUST00000235840	bidirectional_promoter_lncRNA		19	-1	4000542	995
ENSMUSG00000090255	antisense	4921534H16Rik	ENSMUST00000162911	antisense		9	1	98003420	2838
ENSMUSG00000103361	unprocessed_pseudogene	Gm36928	ENSMUST00000192466	unprocessed_pseudogene		Y	1	12883607	694
ENSMUSG00000112275	lincRNA	Gm47078	ENSMUST00000218333	lincRNA		10	1	68313008	2231
ENSMUSG00000052456	protein_coding	Asna1	ENSMUST00000211702	processed_transcript		8	-1	85024868	400
ENSMUSG00000052456	protein_coding	Asna1	ENSMUST00000211221	retained_intron		8	-1	85025263	641
ENSMUSG00000112157	lincRNA	4930545H06Rik	ENSMUST00000218225	lincRNA		10	-1	68321142	763
ENSMUSG00000110305	processed_pseudogene	Gm45513	ENSMUST00000210228	processed_pseudogene		8	-1	63999627	376
ENSMUSG00000018076	protein_coding	Med13l	ENSMUST00000201010	protein_coding	alternative2	5	1	118560739	7781
ENSMUSG00000099560	unprocessed_pseudogene	Mrgprx3-ps	ENSMUST00000187741	unprocessed_pseudogene		7	-1	47310295	918
ENSMUSG00000018076	protein_coding	Med13l	ENSMUST00000201696	processed_transcript		5	1	118561575	444
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000140602	retained_intron		7	-1	141437827	3264
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000201558	retained_intron		7	-1	141435341	5590
ENSMUSG00000085720	antisense	Gm7854	ENSMUST00000187911	antisense		5	-1	43234985	878
ENSMUSG00000033307	protein_coding	Mif	ENSMUST00000038169	protein_coding	principal1	10	-1	75860240	544
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000124266	nonsense_mediated_decay		7	-1	141437638	2568
ENSMUSG00000085720	antisense	Gm7854	ENSMUST00000187409	antisense		5	-1	43235355	1433
ENSMUSG00000026778	protein_coding	Prkcq	ENSMUST00000114853	retained_intron		2	1	11172112	3970
ENSMUSG00000085720	antisense	Gm7854	ENSMUST00000140650	antisense		5	-1	43235352	351
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000153190	protein_coding		7	-1	141432753	402
ENSMUSG00000019906	protein_coding	Lin7a	ENSMUST00000020057	protein_coding	principal1	10	1	107271686	2363
ENSMUSG00000021538	protein_coding	Il9	ENSMUST00000022019	protein_coding	principal1	13	-1	56482246	536
ENSMUSG00000000743	protein_coding	Chmp1a	ENSMUST00000000759	protein_coding	principal1	8	-1	123212760	2140
ENSMUSG00000038530	protein_coding	Rgs4	ENSMUST00000027991	protein_coding	principal1	1	-1	169747642	2941
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000156002	retained_intron		7	-1	141432038	896
ENSMUSG00000033307	protein_coding	Mif	ENSMUST00000218267	retained_intron		10	-1	75860192	600
ENSMUSG00000018076	protein_coding	Med13l	ENSMUST00000202538	retained_intron		5	1	118747319	4389
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000148100	retained_intron		7	-1	141432059	791
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000174095	protein_coding		7	-1	141431598	170
ENSMUSG00000018076	protein_coding	Med13l	ENSMUST00000202787	retained_intron		5	1	118750387	6324
ENSMUSG00000103971	antisense	Gm37679	ENSMUST00000192868	antisense		1	-1	158554299	1192
ENSMUSG00000038530	protein_coding	Rgs4	ENSMUST00000111357	protein_coding		1	-1	169747642	2575
ENSMUSG00000055546	protein_coding	Timd4	ENSMUST00000068877	protein_coding	principal1	11	1	46810800	2173
ENSMUSG00000102508	TEC	Gm37367	ENSMUST00000191771	TEC		1	1	158534807	2602
ENSMUSG00000026778	protein_coding	Prkcq	ENSMUST00000195207	retained_intron		2	1	11172310	2292
ENSMUSG00000000743	protein_coding	Chmp1a	ENSMUST00000167655	retained_intron		8	-1	123209769	1355
ENSMUSG00000073423	protein_coding	Zfp414	ENSMUST00000166627	protein_coding	alternative2	17	1	33629090	1211
ENSMUSG00000103762	TEC	Gm37861	ENSMUST00000193534	TEC		1	1	158375936	2869
ENSMUSG00000000743	protein_coding	Chmp1a	ENSMUST00000212107	processed_transcript		8	-1	123210247	142
ENSMUSG00000026778	protein_coding	Prkcq	ENSMUST00000102970	protein_coding		2	1	11226868	1930
ENSMUSG00000038530	protein_coding	Rgs4	ENSMUST00000132567	retained_intron		1	-1	169747623	727
ENSMUSG00000102618	TEC	Gm37848	ENSMUST00000195288	TEC		1	-1	158551966	3103
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000144174	retained_intron		7	-1	141432848	693
ENSMUSG00000000743	protein_coding	Chmp1a	ENSMUST00000172336	retained_intron		8	-1	123212763	747
ENSMUSG00000026778	protein_coding	Prkcq	ENSMUST00000192461	retained_intron		2	1	11248051	632
ENSMUSG00000096478	TR_V_gene	Trav9d-1	ENSMUST00000178426	TR_V_gene	principal1	14	1	52792316	337
ENSMUSG00000026778	protein_coding	Prkcq	ENSMUST00000195628	processed_transcript		2	1	11250458	2270
ENSMUSG00000096407	IG_V_gene	Ighv6-5	ENSMUST00000193936	IG_V_gene		12	-1	114417053	357
ENSMUSG00000102992	TEC	Gm37766	ENSMUST00000192244	TEC		2	1	11227297	2567
ENSMUSG00000096407	IG_V_gene	Ighv6-5	ENSMUST00000179796	protein_coding	principal1	12	-1	114416895	297
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000138865	protein_coding		7	-1	141435397	932
ENSMUSG00000118537	protein_coding	Shld3	ENSMUST00000133280	protein_coding	principal1	13	-1	104178439	1609
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000136354	protein_coding		7	-1	141434423	866
ENSMUSG00000100749	unprocessed_pseudogene	Gm20798	ENSMUST00000191050	unprocessed_pseudogene		Y	1	35644173	696
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000184518	nonsense_mediated_decay		7	-1	141434315	794
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000201127	protein_coding		7	-1	141434329	743
ENSMUSG00000073423	protein_coding	Zfp414	ENSMUST00000073570	protein_coding	principal2	17	1	33629090	1197
ENSMUSG00000019906	protein_coding	Lin7a	ENSMUST00000105280	protein_coding		10	1	107271706	1634
ENSMUSG00000083649	protein_coding	Rasl2-9	ENSMUST00000147835	protein_coding	principal1	7	-1	5125950	1013
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000201708	retained_intron		7	-1	141433970	465
ENSMUSG00000096215	protein_coding	Smim22	ENSMUST00000184439	protein_coding	principal3	16	1	5007288	382
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000201822	nonsense_mediated_decay		7	-1	141437593	617
ENSMUSG00000096215	protein_coding	Smim22	ENSMUST00000183821	retained_intron		16	1	5007316	372
ENSMUSG00000019906	protein_coding	Lin7a	ENSMUST00000218031	protein_coding		10	1	107272394	1769
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000201072	processed_transcript		7	-1	141435323	574
ENSMUSG00000096857	processed_pseudogene	Gm7732	ENSMUST00000170486	processed_pseudogene		17	1	21129351	1527
ENSMUSG00000109495	processed_pseudogene	Gm47692	ENSMUST00000207732	processed_pseudogene		7	-1	5129356	1085
ENSMUSG00000094582	processed_pseudogene	Gm7736	ENSMUST00000096981	processed_pseudogene		17	1	21152562	1527
ENSMUSG00000118215	protein_coding	Vmn1r55	ENSMUST00000235536	processed_transcript		7	-1	5149667	16510
ENSMUSG00000118215	protein_coding	Vmn1r55	ENSMUST00000235878	processed_transcript		7	-1	5149670	14244
ENSMUSG00000118215	protein_coding	Vmn1r55	ENSMUST00000236042	processed_transcript		7	-1	5149670	11994
ENSMUSG00000096215	protein_coding	Smim22	ENSMUST00000178155	protein_coding	principal3	16	1	5007337	429
ENSMUSG00000118215	protein_coding	Vmn1r55	ENSMUST00000235676	processed_transcript		7	-1	5149670	12375
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000172654	protein_coding		7	-1	141437592	355
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000119825	protein_coding	principal3	17	-1	35700610	3769
ENSMUSG00000073423	protein_coding	Zfp414	ENSMUST00000172455	retained_intron		17	1	33629101	1544
ENSMUSG00000087060	processed_transcript	Eldr	ENSMUST00000136053	processed_transcript		11	-1	16951282	747
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000046603	protein_coding	principal1	5	-1	108629739	4453
ENSMUSG00000118215	protein_coding	Vmn1r55	ENSMUST00000236378	protein_coding	principal1	7	-1	5149670	18544
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000132635	retained_intron		7	-1	141435324	562
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000202840	protein_coding		7	-1	141434600	423
ENSMUSG00000073423	protein_coding	Zfp414	ENSMUST00000170225	protein_coding		17	1	33629121	944
ENSMUSG00000073423	protein_coding	Zfp414	ENSMUST00000234535	processed_transcript		17	1	33629127	684
ENSMUSG00000118215	protein_coding	Vmn1r55	ENSMUST00000098844	protein_coding	principal1	7	-1	5147422	933
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000133206	protein_coding		7	-1	141434604	213
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000133021	protein_coding		7	-1	141434543	345
ENSMUSG00000086927	lincRNA	Gm11823	ENSMUST00000130582	lincRNA		4	-1	13995193	2278
ENSMUSG00000019082	protein_coding	Slc25a22	ENSMUST00000150026	protein_coding		7	-1	141434594	225
ENSMUSG00000073423	protein_coding	Zfp414	ENSMUST00000165504	protein_coding		17	1	33629429	478
ENSMUSG00000082128	processed_pseudogene	Gm11824	ENSMUST00000120191	processed_pseudogene		4	1	14170066	846
ENSMUSG00000087060	processed_transcript	Eldr	ENSMUST00000139493	processed_transcript		11	-1	16951118	941
ENSMUSG00000096215	protein_coding	Smim22	ENSMUST00000184256	processed_transcript		16	1	5007352	381
ENSMUSG00000028609	protein_coding	Magoh	ENSMUST00000030348	protein_coding	principal1	4	1	107879755	692
ENSMUSG00000073423	protein_coding	Zfp414	ENSMUST00000169781	retained_intron		17	1	33630201	470
ENSMUSG00000087060	processed_transcript	Eldr	ENSMUST00000130392	processed_transcript		11	-1	16951099	1540
ENSMUSG00000096215	protein_coding	Smim22	ENSMUST00000185147	protein_coding	alternative2	16	1	5007352	399
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000117301	protein_coding	principal3	17	-1	35704599	3874
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000105631	protein_coding	alternative2	4	-1	155010984	5053
ENSMUSG00000057157	processed_pseudogene	Gm6054	ENSMUST00000078052	processed_pseudogene		5	1	147408982	378
ENSMUSG00000070605	protein_coding	Zfp992	ENSMUST00000105733	protein_coding	principal1	4	1	146449023	4550
ENSMUSG00000087060	processed_transcript	Eldr	ENSMUST00000142777	processed_transcript		11	-1	16951093	673
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000047085	protein_coding	principal1	7	-1	44849075	8750
ENSMUSG00000086068	lincRNA	1700120G11Rik	ENSMUST00000150273	lincRNA		4	-1	14237450	491
ENSMUSG00000009292	protein_coding	Trpm2	ENSMUST00000105401	protein_coding	principal1	10	-1	77969854	7274
ENSMUSG00000107037	processed_pseudogene	Gm29793	ENSMUST00000202874	processed_pseudogene		5	1	147409920	460
ENSMUSG00000087060	processed_transcript	Eldr	ENSMUST00000129735	processed_transcript		11	-1	16951100	598
ENSMUSG00000028609	protein_coding	Magoh	ENSMUST00000141376	processed_transcript		4	1	107882990	483
ENSMUSG00000087060	processed_transcript	Eldr	ENSMUST00000123734	processed_transcript		11	-1	16951042	787
ENSMUSG00000086433	antisense	Rsf1os1	ENSMUST00000126902	antisense		7	-1	97645112	324
ENSMUSG00000096215	protein_coding	Smim22	ENSMUST00000183381	processed_transcript		16	1	5007352	269
ENSMUSG00000111012	processed_pseudogene	Gm7588	ENSMUST00000216866	processed_pseudogene		9	1	13868706	571
ENSMUSG00000108405	processed_pseudogene	Ywhaq-ps1	ENSMUST00000206623	processed_pseudogene		7	-1	97592402	710
ENSMUSG00000019945	protein_coding	Cabcoco1	ENSMUST00000020103	protein_coding	principal2	10	-1	68541896	1262
ENSMUSG00000087060	processed_transcript	Eldr	ENSMUST00000139271	processed_transcript		11	-1	16951082	600
ENSMUSG00000106820	lincRNA	D5Ertd605e	ENSMUST00000201128	lincRNA		5	1	147418601	1081
ENSMUSG00000096215	protein_coding	Smim22	ENSMUST00000183477	processed_transcript		16	1	5007359	247
ENSMUSG00000113798	processed_pseudogene	Gm47385	ENSMUST00000221724	processed_pseudogene		12	-1	23189398	126
ENSMUSG00000099963	lincRNA	Gm28463	ENSMUST00000191085	lincRNA		Y	-1	35765015	1498
ENSMUSG00000096215	protein_coding	Smim22	ENSMUST00000183631	retained_intron		16	1	5007768	391
ENSMUSG00000113762	processed_pseudogene	Gm47386	ENSMUST00000221852	processed_pseudogene		12	-1	23197495	120
ENSMUSG00000019945	protein_coding	Cabcoco1	ENSMUST00000166919	protein_coding	alternative2	10	-1	68525767	1016
ENSMUSG00000081557	processed_pseudogene	Gm5697	ENSMUST00000122295	processed_pseudogene		1	-1	28802721	2482
ENSMUSG00000017721	protein_coding	Pigt	ENSMUST00000103101	protein_coding	principal2	2	1	164497520	2562
ENSMUSG00000111100	lincRNA	Gm47535	ENSMUST00000214890	lincRNA		9	-1	13920119	1522
ENSMUSG00000112306	processed_pseudogene	Gm47744	ENSMUST00000220036	processed_pseudogene		10	1	75875431	374
ENSMUSG00000112793	antisense	Gm32872	ENSMUST00000220037	antisense		10	1	68530094	205
ENSMUSG00000099963	lincRNA	Gm28463	ENSMUST00000185506	lincRNA		Y	-1	35764562	621
ENSMUSG00000017721	protein_coding	Pigt	ENSMUST00000117066	protein_coding	alternative2	2	1	164497535	1712
ENSMUSG00000099963	lincRNA	Gm28463	ENSMUST00000185420	lincRNA		Y	-1	35764562	437
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000108182	protein_coding	alternative1	3	-1	35933472	4980
ENSMUSG00000071562	protein_coding	Stfa1	ENSMUST00000232150	protein_coding	principal1	16	1	36276951	617
ENSMUSG00000091874	protein_coding	Vmn1r56	ENSMUST00000169556	protein_coding	principal1	7	-1	5196747	1832
ENSMUSG00000071562	protein_coding	Stfa1	ENSMUST00000042097	protein_coding		16	1	36277147	514
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000127661	retained_intron		4	-1	154996160	4528
ENSMUSG00000032452	protein_coding	Clstn2	ENSMUST00000035027	protein_coding	principal2	9	-1	98033181	4365
ENSMUSG00000081239	processed_pseudogene	Gm11836	ENSMUST00000121022	processed_pseudogene		4	1	14433891	441
ENSMUSG00000100191	processed_pseudogene	Gm7740	ENSMUST00000186171	processed_pseudogene		17	1	21175779	1527
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000097333	protein_coding	alternative2	17	-1	35704041	3593
ENSMUSG00000017721	protein_coding	Pigt	ENSMUST00000138038	retained_intron		2	1	164497546	2195
ENSMUSG00000041203	protein_coding	Trir	ENSMUST00000047281	protein_coding	principal1	8	1	85026823	902
ENSMUSG00000032452	protein_coding	Clstn2	ENSMUST00000162295	protein_coding	alternative2	9	-1	98032983	4174
ENSMUSG00000095963	processed_pseudogene	Gm7742	ENSMUST00000167648	processed_pseudogene		17	1	21198952	1527
ENSMUSG00000091652	protein_coding	Vmn1r57	ENSMUST00000228062	protein_coding	principal1	7	1	5218493	2365
ENSMUSG00000104462	TEC	Gm37661	ENSMUST00000191863	TEC		9	-1	97930155	1550
ENSMUSG00000003316	protein_coding	Glg1	ENSMUST00000169020	protein_coding	principal1	8	-1	111259216	7021
ENSMUSG00000024451	protein_coding	Arap3	ENSMUST00000237272	protein_coding		18	-1	37998908	5359
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000124517	protein_coding		4	-1	154989791	2213
ENSMUSG00000073716	processed_pseudogene	Gm13241	ENSMUST00000094493	processed_pseudogene		4	1	146475332	780
ENSMUSG00000091652	protein_coding	Vmn1r57	ENSMUST00000227798	protein_coding	principal1	7	1	5218493	2409
ENSMUSG00000058590	processed_pseudogene	Gm6462	ENSMUST00000081488	processed_pseudogene		1	1	28938036	304
ENSMUSG00000093788	unprocessed_pseudogene	Vmn1r-ps147	ENSMUST00000177028	unprocessed_pseudogene		17	-1	21226002	658
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000175982	protein_coding		4	-1	155007007	4046
ENSMUSG00000091652	protein_coding	Vmn1r57	ENSMUST00000227864	retained_intron		7	1	5218493	3122
ENSMUSG00000101235	processed_pseudogene	Gm18033	ENSMUST00000186678	processed_pseudogene		1	1	29219700	550
ENSMUSG00000091652	protein_coding	Vmn1r57	ENSMUST00000170780	protein_coding	principal1	7	1	5220478	933
ENSMUSG00000093867	transcribed_unprocessed_pseudogene	Gsdmcl2	ENSMUST00000185391	processed_transcript		15	1	63880707	796
ENSMUSG00000003316	protein_coding	Glg1	ENSMUST00000168741	protein_coding		8	-1	111177776	2145
ENSMUSG00000081998	processed_pseudogene	Gm13245	ENSMUST00000119646	processed_pseudogene		4	1	146480667	260
ENSMUSG00000116816	unprocessed_pseudogene	Cstdc3	ENSMUST00000232642	unprocessed_pseudogene		16	1	36305342	740
ENSMUSG00000046995	lincRNA	2610303G11Rik	ENSMUST00000061643	lincRNA		9	-1	98187153	517
ENSMUSG00000100299	unprocessed_pseudogene	Gm28584	ENSMUST00000191489	unprocessed_pseudogene		Y	1	35834412	696
ENSMUSG00000017721	protein_coding	Pigt	ENSMUST00000152522	nonsense_mediated_decay		2	1	164497561	2611
ENSMUSG00000102934	TEC	Gm38117	ENSMUST00000194653	TEC		10	-1	107437359	939
ENSMUSG00000032739	protein_coding	Pram1	ENSMUST00000052079	protein_coding	principal1	17	1	33638056	2278
ENSMUSG00000050650	protein_coding	Mrgpra1	ENSMUST00000098438	protein_coding	principal1	7	-1	47354240	1088
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000139947	retained_intron		7	-1	44848911	2411
ENSMUSG00000116897	processed_pseudogene	Gm49647	ENSMUST00000232069	processed_pseudogene		16	1	36319142	464
ENSMUSG00000101127	lincRNA	Gm28585	ENSMUST00000187587	lincRNA		Y	1	35863133	442
ENSMUSG00000017721	protein_coding	Pigt	ENSMUST00000131976	retained_intron		2	1	164499916	804
ENSMUSG00000109164	processed_pseudogene	Gm45085	ENSMUST00000209100	processed_pseudogene		7	1	47349453	441
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000145959	nonsense_mediated_decay		7	-1	44849079	2362
ENSMUSG00000093867	transcribed_unprocessed_pseudogene	Gsdmcl2	ENSMUST00000177709	processed_transcript		15	1	63880726	1025
ENSMUSG00000104187	TEC	Gm37820	ENSMUST00000194021	TEC		14	1	61683510	2147
ENSMUSG00000024451	protein_coding	Arap3	ENSMUST00000042944	protein_coding	principal1	18	-1	37997574	5219
ENSMUSG00000101452	processed_pseudogene	Gm28530	ENSMUST00000190473	processed_pseudogene		9	1	98301650	577
ENSMUSG00000057203	protein_coding	Vmn1r234	ENSMUST00000235895	protein_coding	principal1	17	1	21226087	8179
ENSMUSG00000093867	transcribed_unprocessed_pseudogene	Gsdmcl2	ENSMUST00000186026	transcribed_unprocessed_pseudogene		15	1	63882047	736
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000130081	retained_intron		7	-1	44848890	2336
ENSMUSG00000057203	protein_coding	Vmn1r234	ENSMUST00000237806	processed_transcript		17	1	21226087	6373
ENSMUSG00000093867	transcribed_unprocessed_pseudogene	Gsdmcl2	ENSMUST00000185431	processed_transcript		15	1	63888602	1911
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000176194	protein_coding	alternative2	4	-1	155019432	5619
ENSMUSG00000114706	processed_pseudogene	Gm47952	ENSMUST00000224682	processed_pseudogene		14	1	61921376	688
ENSMUSG00000003316	protein_coding	Glg1	ENSMUST00000164283	nonsense_mediated_decay		8	-1	111259200	2858
ENSMUSG00000069855	protein_coding	Slc47a2	ENSMUST00000134423	protein_coding		11	-1	61342850	1503
ENSMUSG00000003316	protein_coding	Glg1	ENSMUST00000003404	protein_coding		8	-1	111259216	3511
ENSMUSG00000057203	protein_coding	Vmn1r234	ENSMUST00000079633	protein_coding	principal1	17	1	21228826	990
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000176620	retained_intron		4	-1	154992620	4158
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000155957	nonsense_mediated_decay		17	-1	35700552	2633
ENSMUSG00000069855	protein_coding	Slc47a2	ENSMUST00000147450	processed_transcript		11	-1	61342584	278
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000208714	nonsense_mediated_decay		7	-1	44843074	526
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000139976	protein_coding	principal3	4	-1	155010984	5322
ENSMUSG00000093648	unprocessed_pseudogene	Vmn1r-ps148	ENSMUST00000176775	unprocessed_pseudogene		17	1	21244841	455
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000149921	retained_intron		7	-1	44844324	305
ENSMUSG00000032456	protein_coding	Nmnat3	ENSMUST00000134253	protein_coding		9	1	98287435	349
ENSMUSG00000032739	protein_coding	Pram1	ENSMUST00000116619	nonsense_mediated_decay		17	1	33638095	2268
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000155628	protein_coding		17	-1	35701964	1936
ENSMUSG00000032739	protein_coding	Pram1	ENSMUST00000166215	retained_intron		17	1	33644817	582
ENSMUSG00000069855	protein_coding	Slc47a2	ENSMUST00000093029	protein_coding	principal1	11	-1	61342860	2377
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000153161	retained_intron		7	-1	44846000	835
ENSMUSG00000024451	protein_coding	Arap3	ENSMUST00000236772	retained_intron		18	-1	37975882	1556
ENSMUSG00000103858	TEC	Gm37604	ENSMUST00000191749	TEC		1	1	141546206	1272
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000148065	protein_coding		17	-1	35703977	888
ENSMUSG00000032456	protein_coding	Nmnat3	ENSMUST00000129771	processed_transcript		9	1	98287455	1059
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000135665	protein_coding	alternative2	4	-1	155043154	4349
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000207293	protein_coding		7	-1	44848886	692
ENSMUSG00000099671	processed_pseudogene	Gm18183	ENSMUST00000191024	processed_pseudogene		1	-1	142455814	615
ENSMUSG00000040183	protein_coding	Ankrd6	ENSMUST00000035719	protein_coding	principal2	4	-1	32923455	4683
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000198389	protein_coding	principal3	3	-1	35930074	3020
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000208890	protein_coding		7	-1	44848534	486
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000186598	protein_coding		4	-1	155054752	2119
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000134995	protein_coding		17	-1	35704621	926
ENSMUSG00000062543	transcribed_unprocessed_pseudogene	Gsdmcl1	ENSMUST00000071847	processed_transcript		15	1	63847309	1133
ENSMUSG00000003974	protein_coding	Grm3	ENSMUST00000004076	protein_coding	principal1	5	-1	9725170	3049
ENSMUSG00000117118	antisense	Gm49878	ENSMUST00000232782	antisense		17	1	73609052	1587
ENSMUSG00000035545	protein_coding	Leng8	ENSMUST00000128756	protein_coding		7	1	4137039	720
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000207532	protein_coding		7	-1	44848895	253
ENSMUSG00000062543	transcribed_unprocessed_pseudogene	Gsdmcl1	ENSMUST00000190937	transcribed_unprocessed_pseudogene		15	1	63848662	735
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000146472	protein_coding		17	-1	35697971	1032
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000142098	retained_intron		7	-1	44848895	462
ENSMUSG00000117102	TEC	AC107792.1	ENSMUST00000233431	TEC		17	-1	73517755	3039
ENSMUSG00000106637	TEC	Gm42455	ENSMUST00000199761	TEC		5	-1	9602607	2736
ENSMUSG00000040183	protein_coding	Ankrd6	ENSMUST00000084748	protein_coding	alternative2	4	-1	32950841	4354
ENSMUSG00000038520	protein_coding	Tbc1d17	ENSMUST00000133846	retained_intron		7	-1	44848594	226
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000145662	protein_coding		4	-1	155010984	1818
ENSMUSG00000117228	processed_pseudogene	Gm49877	ENSMUST00000232954	processed_pseudogene		17	-1	73616327	713
ENSMUSG00000040183	protein_coding	Ankrd6	ENSMUST00000108166	protein_coding		4	-1	32860442	2321
ENSMUSG00000109211	processed_pseudogene	Gm45146	ENSMUST00000207108	processed_pseudogene		7	1	5263084	221
ENSMUSG00000109511	protein_coding	Nup62	ENSMUST00000208626	protein_coding	principal1	7	1	44816088	2708
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000145900	protein_coding		17	-1	35702046	749
ENSMUSG00000003348	protein_coding	Mob3a	ENSMUST00000003438	protein_coding	principal1	10	-1	80701855	2682
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000197489	nonsense_mediated_decay		3	-1	35932836	1018
ENSMUSG00000035545	protein_coding	Leng8	ENSMUST00000132086	protein_coding		7	1	4137049	339
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000131173	protein_coding		4	-1	155056784	613
ENSMUSG00000102196	lincRNA	Gm38171	ENSMUST00000195716	lincRNA		2	-1	11319874	478
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000197546	nonsense_mediated_decay		3	-1	35921188	621
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000135078	protein_coding		17	-1	35702317	526
ENSMUSG00000029055	protein_coding	Plch2	ENSMUST00000126098	protein_coding		4	-1	155019428	482
ENSMUSG00000003348	protein_coding	Mob3a	ENSMUST00000218090	protein_coding		10	-1	80701977	607
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000166980	protein_coding	principal3	17	-1	35702044	3627
ENSMUSG00000102894	TEC	Gm37851	ENSMUST00000193871	TEC		2	1	11332825	889
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000200661	protein_coding		3	-1	35932334	845
ENSMUSG00000102242	processed_pseudogene	Gm37719	ENSMUST00000194615	processed_pseudogene		3	-1	61291446	292
ENSMUSG00000003534	protein_coding	Ddr1	ENSMUST00000003628	protein_coding	principal3	17	-1	35704139	3802
ENSMUSG00000003348	protein_coding	Mob3a	ENSMUST00000220138	protein_coding		10	-1	80693736	454
ENSMUSG00000102667	processed_pseudogene	Gm19901	ENSMUST00000192191	processed_pseudogene		3	-1	61329193	495
ENSMUSG00000003348	protein_coding	Mob3a	ENSMUST00000218439	processed_transcript		10	-1	80701828	314
ENSMUSG00000082647	processed_pseudogene	Gm14056	ENSMUST00000117198	processed_pseudogene		2	1	136399062	642
ENSMUSG00000081310	processed_pseudogene	Gm14054	ENSMUST00000120744	processed_pseudogene		2	-1	136403422	704
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000148465	protein_coding		3	-1	35937445	784
ENSMUSG00000025439	protein_coding	Clns1a	ENSMUST00000026506	protein_coding	principal1	7	1	97696634	1504
ENSMUSG00000040183	protein_coding	Ankrd6	ENSMUST00000128496	processed_transcript		4	-1	32923505	798
ENSMUSG00000103473	antisense	Gm37696	ENSMUST00000194223	antisense		3	-1	61361897	3349
ENSMUSG00000040183	protein_coding	Ankrd6	ENSMUST00000149650	processed_transcript		4	-1	32860683	613
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000196261	processed_transcript		3	-1	35909845	776
ENSMUSG00000040183	protein_coding	Ankrd6	ENSMUST00000140837	processed_transcript		4	-1	32822801	713
ENSMUSG00000040183	protein_coding	Ankrd6	ENSMUST00000084749	protein_coding	principal2	4	-1	32923505	4573
ENSMUSG00000025439	protein_coding	Clns1a	ENSMUST00000148125	retained_intron		7	1	97696695	393
ENSMUSG00000040183	protein_coding	Ankrd6	ENSMUST00000084750	protein_coding	principal2	4	-1	32950826	4444
ENSMUSG00000036894	protein_coding	Rap2b	ENSMUST00000049064	protein_coding	principal1	3	1	61361638	6793
ENSMUSG00000025439	protein_coding	Clns1a	ENSMUST00000205667	retained_intron		7	1	97717795	3002
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000196263	processed_transcript		3	-1	35932815	684
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000196115	retained_intron		3	-1	35932824	631
ENSMUSG00000017386	protein_coding	Traf4	ENSMUST00000149437	retained_intron		11	-1	78165589	3223
ENSMUSG00000086993	antisense	Rsf1os2	ENSMUST00000155074	antisense		7	-1	97696543	998
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000198362	protein_coding		3	-1	35921188	282
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000161861	protein_coding	principal1	16	-1	16560219	8342
ENSMUSG00000086993	antisense	Rsf1os2	ENSMUST00000147690	antisense		7	-1	97696621	3091
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000196270	protein_coding		3	-1	35930119	588
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000199173	protein_coding		3	-1	35937439	546
ENSMUSG00000086993	antisense	Rsf1os2	ENSMUST00000141549	antisense		7	-1	97696828	706
ENSMUSG00000032456	protein_coding	Nmnat3	ENSMUST00000112935	protein_coding	principal1	9	1	98296583	2166
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000162671	protein_coding	principal1	16	-1	16599978	2714
ENSMUSG00000109511	protein_coding	Nup62	ENSMUST00000057195	protein_coding	principal1	7	1	44816088	2722
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000196174	retained_intron		3	-1	35931458	2949
ENSMUSG00000027708	protein_coding	Dcun1d1	ENSMUST00000178098	protein_coding	principal3	3	-1	35932334	4434
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000128646	protein_coding	principal4	13	1	42680623	5430
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000123682	nonsense_mediated_decay		5	-1	76905427	4066
ENSMUSG00000106096	processed_pseudogene	B230207O21Rik	ENSMUST00000198634	processed_pseudogene		3	1	35973771	321
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000069284	protein_coding		16	-1	16527411	2637
ENSMUSG00000003363	protein_coding	Pld3	ENSMUST00000117095	protein_coding	principal1	7	-1	27553212	2282
ENSMUSG00000032456	protein_coding	Nmnat3	ENSMUST00000141427	retained_intron		9	1	98296604	2116
ENSMUSG00000035623	protein_coding	Rsf1	ENSMUST00000205536	retained_intron		7	1	97579889	3085
ENSMUSG00000105095	TEC	8430422M14Rik	ENSMUST00000199608	TEC		3	-1	35956257	822
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000145022	processed_transcript		5	-1	76876667	614
ENSMUSG00000009075	protein_coding	Cabp7	ENSMUST00000009219	protein_coding	principal1	11	-1	4746778	2628
ENSMUSG00000109511	protein_coding	Nup62	ENSMUST00000208172	protein_coding		7	1	44816300	715
ENSMUSG00000003363	protein_coding	Pld3	ENSMUST00000117611	protein_coding	principal1	7	-1	27553218	2297
ENSMUSG00000109511	protein_coding	Nup62	ENSMUST00000207103	protein_coding	principal1	7	1	44816383	2414
ENSMUSG00000032110	protein_coding	Acrv1	ENSMUST00000034620	protein_coding	principal1	9	1	36693220	1101
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000132050	retained_intron		13	1	42680799	2711
ENSMUSG00000003363	protein_coding	Pld3	ENSMUST00000155287	retained_intron		7	-1	27532746	463
ENSMUSG00000032456	protein_coding	Nmnat3	ENSMUST00000112938	protein_coding		9	1	98296604	848
ENSMUSG00000109511	protein_coding	Nup62	ENSMUST00000207085	protein_coding		7	1	44818437	334
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000149235	protein_coding	principal4	13	1	42681513	2076
ENSMUSG00000003363	protein_coding	Pld3	ENSMUST00000142981	retained_intron		7	-1	27537940	859
ENSMUSG00000037455	protein_coding	Slc18b1	ENSMUST00000119597	protein_coding	principal1	10	1	23796986	2837
ENSMUSG00000003363	protein_coding	Pld3	ENSMUST00000131106	nonsense_mediated_decay		7	-1	27553016	626
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000066928	protein_coding		13	1	42709543	2013
ENSMUSG00000032456	protein_coding	Nmnat3	ENSMUST00000112937	protein_coding		9	1	98296662	1898
ENSMUSG00000003363	protein_coding	Pld3	ENSMUST00000127240	protein_coding		7	-1	27553184	723
ENSMUSG00000032110	protein_coding	Acrv1	ENSMUST00000184160	retained_intron		9	1	36693254	3265
ENSMUSG00000003363	protein_coding	Pld3	ENSMUST00000150964	protein_coding		7	-1	27542745	364
ENSMUSG00000037455	protein_coding	Slc18b1	ENSMUST00000134170	nonsense_mediated_decay		10	1	23797052	617
ENSMUSG00000056293	protein_coding	Gsdmc2	ENSMUST00000188404	protein_coding	principal1	15	-1	63845177	2078
ENSMUSG00000037455	protein_coding	Slc18b1	ENSMUST00000133289	protein_coding		10	1	23797200	437
ENSMUSG00000074141	protein_coding	Il4i1	ENSMUST00000149779	processed_transcript		7	1	44816387	504
ENSMUSG00000003363	protein_coding	Pld3	ENSMUST00000143903	processed_transcript		7	-1	27553151	341
ENSMUSG00000024451	protein_coding	Arap3	ENSMUST00000236534	protein_coding		18	-1	37974686	464
ENSMUSG00000056293	protein_coding	Gsdmc2	ENSMUST00000188691	protein_coding	principal1	15	-1	63845162	2162
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000148891	protein_coding		13	1	42709581	5307
ENSMUSG00000024451	protein_coding	Arap3	ENSMUST00000235391	retained_intron		18	-1	37984429	499
ENSMUSG00000037455	protein_coding	Slc18b1	ENSMUST00000127841	nonsense_mediated_decay		10	1	23805976	224
ENSMUSG00000114336	processed_pseudogene	Gm18643	ENSMUST00000224408	processed_pseudogene		13	-1	37095675	3129
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000135225	nonsense_mediated_decay		5	-1	108629739	4310
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000145467	nonsense_mediated_decay		5	-1	108629739	4487
ENSMUSG00000082818	processed_pseudogene	Gm12175	ENSMUST00000122081	processed_pseudogene		11	1	46874413	345
ENSMUSG00000056293	protein_coding	Gsdmc2	ENSMUST00000089900	protein_coding	principal1	15	-1	63835949	1981
ENSMUSG00000114428	lincRNA	Gm47707	ENSMUST00000225257	lincRNA		13	1	37156018	383
ENSMUSG00000037455	protein_coding	Slc18b1	ENSMUST00000143931	retained_intron		10	1	23824487	916
ENSMUSG00000053626	protein_coding	Tll1	ENSMUST00000066166	protein_coding	principal1	8	-1	64205993	4767
ENSMUSG00000024451	protein_coding	Arap3	ENSMUST00000237188	processed_transcript		18	-1	37997555	3601
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000133745	retained_intron		5	-1	108571869	625
ENSMUSG00000035623	protein_coding	Rsf1	ENSMUST00000156060	retained_intron		7	1	97579897	5695
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000131942	protein_coding	alternative1	13	1	42866247	2056
ENSMUSG00000037455	protein_coding	Slc18b1	ENSMUST00000179321	protein_coding		10	1	23796986	2843
ENSMUSG00000114297	lincRNA	Gm30600	ENSMUST00000225067	lincRNA		13	-1	37244907	310
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000199048	nonsense_mediated_decay		5	-1	108629755	3532
ENSMUSG00000114249	lincRNA	Gm47709	ENSMUST00000225533	lincRNA		13	1	37248660	1059
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000127859	processed_transcript		13	1	42866834	181
ENSMUSG00000024451	protein_coding	Arap3	ENSMUST00000237677	retained_intron		18	-1	37998733	3880
ENSMUSG00000114508	lincRNA	Gm47711	ENSMUST00000224579	lincRNA		13	1	37326466	384
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000199010	processed_transcript		5	-1	108577242	644
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000239286	protein_coding		13	1	42916651	707
ENSMUSG00000074771	protein_coding	Ankef1	ENSMUST00000154394	processed_transcript		2	1	136501910	2407
ENSMUSG00000046402	protein_coding	Rbp1	ENSMUST00000052068	protein_coding	principal1	9	1	98422961	2652
ENSMUSG00000024451	protein_coding	Arap3	ENSMUST00000236588	protein_coding		18	-1	37998755	683
ENSMUSG00000009292	protein_coding	Trpm2	ENSMUST00000105400	processed_transcript		10	-1	77967457	5980
ENSMUSG00000092465	unprocessed_pseudogene	Gm20472	ENSMUST00000174403	unprocessed_pseudogene		12	-1	23315358	1240
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000196010	retained_intron		5	-1	108580957	402
ENSMUSG00000014351	protein_coding	Gip	ENSMUST00000103157	protein_coding	principal1	11	1	96024545	652
ENSMUSG00000053626	protein_coding	Tll1	ENSMUST00000209451	retained_intron		8	-1	64206008	2908
ENSMUSG00000009292	protein_coding	Trpm2	ENSMUST00000140471	retained_intron		10	-1	77931779	3990
ENSMUSG00000099435	transcribed_unprocessed_pseudogene	1700065I16Rik	ENSMUST00000185477	processed_transcript		15	1	63817188	813
ENSMUSG00000017386	protein_coding	Traf4	ENSMUST00000017530	protein_coding	principal1	11	-1	78165589	2078
ENSMUSG00000024451	protein_coding	Arap3	ENSMUST00000236134	protein_coding		18	-1	37998969	434
ENSMUSG00000116039	processed_pseudogene	Gm49483	ENSMUST00000231179	processed_pseudogene		15	1	99413474	220
ENSMUSG00000014351	protein_coding	Gip	ENSMUST00000103156	protein_coding	principal1	11	1	96025046	607
ENSMUSG00000009292	protein_coding	Trpm2	ENSMUST00000153842	retained_intron		10	-1	77933031	4508
ENSMUSG00000099435	transcribed_unprocessed_pseudogene	1700065I16Rik	ENSMUST00000191090	processed_transcript		15	1	63817202	709
ENSMUSG00000099435	transcribed_unprocessed_pseudogene	1700065I16Rik	ENSMUST00000185277	transcribed_unprocessed_pseudogene		15	1	63818210	512
ENSMUSG00000053626	protein_coding	Tll1	ENSMUST00000211755	retained_intron		8	-1	64206271	2516
ENSMUSG00000053626	protein_coding	Tll1	ENSMUST00000210256	protein_coding		8	-1	64206271	687
ENSMUSG00000009292	protein_coding	Trpm2	ENSMUST00000138238	retained_intron		10	-1	77920824	2196
ENSMUSG00000074771	protein_coding	Ankef1	ENSMUST00000150189	processed_transcript		2	1	136501955	680
ENSMUSG00000009292	protein_coding	Trpm2	ENSMUST00000126206	retained_intron		10	-1	77938037	2838
ENSMUSG00000017386	protein_coding	Traf4	ENSMUST00000148218	retained_intron		11	-1	78165516	925
ENSMUSG00000009292	protein_coding	Trpm2	ENSMUST00000217806	retained_intron		10	-1	77924299	627
ENSMUSG00000079594	protein_coding	Cstdc6	ENSMUST00000114850	protein_coding	principal1	16	-1	36334332	387
ENSMUSG00000009292	protein_coding	Trpm2	ENSMUST00000219997	protein_coding		10	-1	77969822	436
ENSMUSG00000009292	protein_coding	Trpm2	ENSMUST00000105399	protein_coding		10	-1	77969804	731
ENSMUSG00000009292	protein_coding	Trpm2	ENSMUST00000154996	processed_transcript		10	-1	77970563	352
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000137872	retained_intron		5	-1	108625091	3846
ENSMUSG00000070799	protein_coding	Psg26	ENSMUST00000094798	protein_coding	principal1	7	-1	18484177	2086
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000200204	protein_coding		5	-1	108591707	387
ENSMUSG00000029763	protein_coding	Exoc4	ENSMUST00000052266	protein_coding	principal1	6	1	33249085	4824
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000139303	nonsense_mediated_decay		5	-1	108596828	710
ENSMUSG00000081334	transcribed_unprocessed_pseudogene	Vmn1r-ps94	ENSMUST00000122016	transcribed_unprocessed_pseudogene		13	1	22092119	458
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000145935	processed_transcript		5	-1	108629423	339
ENSMUSG00000024726	protein_coding	Carnmt1	ENSMUST00000025632	protein_coding	principal1	19	1	18670764	4518
ENSMUSG00000062234	protein_coding	Gak	ENSMUST00000199662	nonsense_mediated_decay		5	-1	108629693	444
ENSMUSG00000069299	protein_coding	Vmn1r188	ENSMUST00000228243	protein_coding	principal1	13	1	22084440	8473
ENSMUSG00000009076	protein_coding	Zmat5	ENSMUST00000009220	protein_coding	principal1	11	1	4704678	792
ENSMUSG00000069299	protein_coding	Vmn1r188	ENSMUST00000226680	protein_coding	principal1	13	1	22084440	8374
ENSMUSG00000035172	protein_coding	Plekhh3	ENSMUST00000139200	nonsense_mediated_decay		11	-1	101165620	1410
ENSMUSG00000000435	protein_coding	Myf5	ENSMUST00000000445	protein_coding	principal1	10	-1	107486134	2083
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000137434	processed_transcript		13	1	43112133	689
ENSMUSG00000069299	protein_coding	Vmn1r188	ENSMUST00000091739	protein_coding	principal1	13	1	22087878	927
ENSMUSG00000024726	protein_coding	Carnmt1	ENSMUST00000235736	nonsense_mediated_decay		19	1	18670879	1714
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000136576	protein_coding		13	1	43122857	716
ENSMUSG00000024726	protein_coding	Carnmt1	ENSMUST00000236401	processed_transcript		19	1	18671329	215
ENSMUSG00000050102	protein_coding	Vmn1r235	ENSMUST00000235270	protein_coding	alternative2	17	1	21256411	3220
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000120963	protein_coding	principal1	5	-1	76905514	3694
ENSMUSG00000112486	processed_pseudogene	Gm48659	ENSMUST00000220120	processed_pseudogene		12	-1	49412248	435
ENSMUSG00000009076	protein_coding	Zmat5	ENSMUST00000154341	processed_transcript		11	1	4704708	599
ENSMUSG00000035545	protein_coding	Leng8	ENSMUST00000037472	protein_coding	principal2	7	1	4137049	5105
ENSMUSG00000009076	protein_coding	Zmat5	ENSMUST00000141970	processed_transcript		11	1	4728585	601
ENSMUSG00000055827	protein_coding	Gsdmc3	ENSMUST00000185526	protein_coding	principal1	15	-1	63877720	2179
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000126741	nonsense_mediated_decay		5	-1	76905513	3515
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000138640	nonsense_mediated_decay		13	1	43122872	870
ENSMUSG00000100844	lincRNA	1810007C17Rik	ENSMUST00000187665	lincRNA		12	-1	49480862	710
ENSMUSG00000055827	protein_coding	Gsdmc3	ENSMUST00000190682	protein_coding	principal1	15	-1	63878558	2140
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000149602	protein_coding		5	-1	76882360	636
ENSMUSG00000050102	protein_coding	Vmn1r235	ENSMUST00000236212	protein_coding	principal2	17	1	21256411	3301
ENSMUSG00000035545	protein_coding	Leng8	ENSMUST00000117274	protein_coding		7	1	4137060	874
ENSMUSG00000105348	processed_pseudogene	Gm35212	ENSMUST00000196672	processed_pseudogene		5	1	9779405	606
ENSMUSG00000050102	protein_coding	Vmn1r235	ENSMUST00000236821	protein_coding	principal2	17	1	21256411	3390
ENSMUSG00000055827	protein_coding	Gsdmc3	ENSMUST00000089894	protein_coding	principal1	15	-1	63869297	1443
ENSMUSG00000050102	protein_coding	Vmn1r235	ENSMUST00000237540	protein_coding	alternative2	17	1	21256411	3309
ENSMUSG00000029763	protein_coding	Exoc4	ENSMUST00000137043	retained_intron		6	1	33249128	4225
ENSMUSG00000050102	protein_coding	Vmn1r235	ENSMUST00000237810	protein_coding	alternative2	17	1	21256411	3368
ENSMUSG00000050102	protein_coding	Vmn1r235	ENSMUST00000236183	protein_coding	alternative2	17	1	21256411	3279
ENSMUSG00000039782	protein_coding	Cpeb2	ENSMUST00000166713	protein_coding	alternative2	5	1	43233170	7139
ENSMUSG00000107336	TEC	Gm43461	ENSMUST00000202351	TEC		5	1	147427738	996
ENSMUSG00000035545	protein_coding	Leng8	ENSMUST00000121270	protein_coding	alternative2	7	1	4137066	3620
ENSMUSG00000029763	protein_coding	Exoc4	ENSMUST00000090381	protein_coding		6	1	33249128	2598
ENSMUSG00000050102	protein_coding	Vmn1r235	ENSMUST00000060603	protein_coding	principal2	17	1	21260427	1799
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000150620	processed_transcript		13	1	43125888	616
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000140651	processed_transcript		13	1	43125888	586
ENSMUSG00000035545	protein_coding	Leng8	ENSMUST00000144248	protein_coding		7	1	4137071	531
ENSMUSG00000032454	protein_coding	Rbp2	ENSMUST00000189446	protein_coding	principal1	9	1	98486115	803
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000123987	processed_transcript		13	1	43125920	590
ENSMUSG00000032454	protein_coding	Rbp2	ENSMUST00000187905	protein_coding	principal1	9	1	98486166	611
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000136951	processed_transcript		13	1	43132997	380
ENSMUSG00000032454	protein_coding	Rbp2	ENSMUST00000188779	processed_transcript		9	1	98491697	291
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000161201	processed_transcript		13	1	43135384	273
ENSMUSG00000054728	protein_coding	Phactr1	ENSMUST00000110161	protein_coding	alternative2	13	1	42682698	1950
ENSMUSG00000029763	protein_coding	Exoc4	ENSMUST00000132842	processed_transcript		6	1	33249128	3686
ENSMUSG00000035623	protein_coding	Rsf1	ENSMUST00000107153	protein_coding	principal1	7	1	97579897	11124
ENSMUSG00000029763	protein_coding	Exoc4	ENSMUST00000115080	protein_coding		6	1	33249132	2369
ENSMUSG00000035545	protein_coding	Leng8	ENSMUST00000127723	retained_intron		7	1	4137084	5599
ENSMUSG00000021650	protein_coding	Ptcd2	ENSMUST00000022153	protein_coding	principal1	13	-1	99344705	1704
ENSMUSG00000032454	protein_coding	Rbp2	ENSMUST00000035029	protein_coding	principal1	9	1	98490537	672
ENSMUSG00000089710	antisense	Gm15810	ENSMUST00000160241	antisense		13	-1	42788258	681
ENSMUSG00000035623	protein_coding	Rsf1	ENSMUST00000127891	nonsense_mediated_decay		7	1	97579907	754
ENSMUSG00000035545	protein_coding	Leng8	ENSMUST00000154571	protein_coding		7	1	4137562	502
ENSMUSG00000029763	protein_coding	Exoc4	ENSMUST00000139132	processed_transcript		6	1	33249136	1060
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000135697	retained_intron		5	-1	76905492	3341
ENSMUSG00000103579	TEC	Gm37113	ENSMUST00000195675	TEC		9	1	98493968	1157
ENSMUSG00000029763	protein_coding	Exoc4	ENSMUST00000152835	processed_transcript		6	1	33332355	932
ENSMUSG00000035623	protein_coding	Rsf1	ENSMUST00000206866	retained_intron		7	1	97657280	3635
ENSMUSG00000035545	protein_coding	Leng8	ENSMUST00000155881	retained_intron		7	1	4142159	559
ENSMUSG00000029763	protein_coding	Exoc4	ENSMUST00000156207	retained_intron		6	1	33333417	411
ENSMUSG00000087202	antisense	Gm15813	ENSMUST00000142286	antisense		13	-1	43125717	2541
ENSMUSG00000039782	protein_coding	Cpeb2	ENSMUST00000169035	protein_coding	principal2	5	1	43233170	7050
ENSMUSG00000071561	protein_coding	Cstdc5	ENSMUST00000096089	protein_coding	principal1	16	-1	36367748	619
ENSMUSG00000096650	protein_coding	Gm20896	ENSMUST00000188585	protein_coding	principal1	Y	-1	35921526	921
ENSMUSG00000096650	protein_coding	Gm20896	ENSMUST00000180332	protein_coding		Y	-1	35920097	498
ENSMUSG00000029763	protein_coding	Exoc4	ENSMUST00000143190	processed_transcript		6	1	33701434	641
ENSMUSG00000035545	protein_coding	Leng8	ENSMUST00000146434	retained_intron		7	1	4144720	751
ENSMUSG00000090135	sense_intronic	Gm15809	ENSMUST00000159361	sense_intronic		13	1	42998511	661
ENSMUSG00000005873	protein_coding	Reep5	ENSMUST00000006027	protein_coding	principal1	18	-1	34373369	2852
ENSMUSG00000051074	processed_transcript	4930579K19Rik	ENSMUST00000190541	lincRNA		9	-1	98563592	632
ENSMUSG00000021423	protein_coding	Ly86	ENSMUST00000021860	protein_coding	principal1	13	1	37345208	1134
ENSMUSG00000039782	protein_coding	Cpeb2	ENSMUST00000114065	protein_coding	alternative2	5	1	43233170	7116
ENSMUSG00000029763	protein_coding	Exoc4	ENSMUST00000134653	processed_transcript		6	1	33862100	384
ENSMUSG00000083728	processed_pseudogene	Gm13854	ENSMUST00000121183	processed_pseudogene		6	-1	33377446	1679
ENSMUSG00000035623	protein_coding	Rsf1	ENSMUST00000123731	nonsense_mediated_decay		7	1	97662552	2493
ENSMUSG00000043432	protein_coding	Leng9	ENSMUST00000058358	protein_coding	principal1	7	-1	4150374	2460
ENSMUSG00000051074	processed_transcript	4930579K19Rik	ENSMUST00000194714	TEC		9	-1	98563611	1152
ENSMUSG00000035623	protein_coding	Rsf1	ENSMUST00000150288	retained_intron		7	1	97669492	542
ENSMUSG00000051074	processed_transcript	4930579K19Rik	ENSMUST00000058992	processed_transcript		9	-1	98563611	652
ENSMUSG00000021423	protein_coding	Ly86	ENSMUST00000225716	retained_intron		13	1	37345389	2684
ENSMUSG00000071561	protein_coding	Cstdc5	ENSMUST00000138796	nonsense_mediated_decay		16	-1	36367548	510
ENSMUSG00000103223	TEC	Gm37730	ENSMUST00000192432	TEC		2	-1	11367451	2211
ENSMUSG00000035623	protein_coding	Rsf1	ENSMUST00000135270	nonsense_mediated_decay		7	1	97669847	764
ENSMUSG00000039782	protein_coding	Cpeb2	ENSMUST00000198754	retained_intron		5	1	43233927	1775
ENSMUSG00000005873	protein_coding	Reep5	ENSMUST00000236887	protein_coding		18	-1	34372497	439
ENSMUSG00000071561	protein_coding	Cstdc5	ENSMUST00000146691	retained_intron		16	-1	36367551	389
ENSMUSG00000102674	lincRNA	8030442B05Rik	ENSMUST00000192626	lincRNA		2	-1	11398501	1035
ENSMUSG00000108547	processed_pseudogene	Gm45186	ENSMUST00000206874	processed_pseudogene		7	-1	97654753	478
ENSMUSG00000039782	protein_coding	Cpeb2	ENSMUST00000114066	protein_coding		5	1	43235038	837
ENSMUSG00000108442	processed_pseudogene	Rpl15-ps5	ENSMUST00000205636	processed_pseudogene		7	-1	97595441	605
ENSMUSG00000103321	TEC	4933403L11Rik	ENSMUST00000193857	TEC		2	-1	11384907	1121
ENSMUSG00000104267	protein_coding	Gm20807	ENSMUST00000194687	protein_coding	principal1	Y	1	13042891	1336
ENSMUSG00000005873	protein_coding	Reep5	ENSMUST00000235227	nonsense_mediated_decay		18	-1	34372498	430
ENSMUSG00000039782	protein_coding	Cpeb2	ENSMUST00000200685	processed_transcript		5	1	43235050	208
ENSMUSG00000087689	antisense	Gm15845	ENSMUST00000130244	antisense		16	1	36367070	996
ENSMUSG00000113757	lincRNA	Gm47507	ENSMUST00000221487	lincRNA		13	1	5887109	769
ENSMUSG00000005873	protein_coding	Reep5	ENSMUST00000237414	processed_transcript		18	-1	34372498	399
ENSMUSG00000039782	protein_coding	Cpeb2	ENSMUST00000127599	processed_transcript		5	1	43237315	640
ENSMUSG00000005873	protein_coding	Reep5	ENSMUST00000235153	protein_coding		18	-1	34374070	406
ENSMUSG00000082792	processed_pseudogene	Gm12176	ENSMUST00000121420	processed_pseudogene		11	1	47541432	875
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000146570	protein_coding		5	-1	76905487	2264
ENSMUSG00000086006	lincRNA	Gm13293	ENSMUST00000131188	lincRNA		2	1	11339488	1615
ENSMUSG00000089968	antisense	Nckap5los	ENSMUST00000159738	antisense		15	1	99427701	1712
ENSMUSG00000092472	unprocessed_pseudogene	Gm20473	ENSMUST00000173064	unprocessed_pseudogene		12	-1	23338420	112
ENSMUSG00000105326	TEC	6030400A10Rik	ENSMUST00000199734	TEC		5	1	43265157	1212
ENSMUSG00000113017	lincRNA	Gm46401	ENSMUST00000223425	lincRNA		13	1	5915793	803
ENSMUSG00000086491	lincRNA	Gm13291	ENSMUST00000143527	lincRNA		2	1	11385003	655
ENSMUSG00000113017	lincRNA	Gm46401	ENSMUST00000221291	lincRNA		13	1	5977785	1089
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000123059	retained_intron		5	-1	76884629	775
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000201283	retained_intron		5	-1	76895078	2458
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000136080	processed_transcript		5	-1	76905492	651
ENSMUSG00000096701	unprocessed_pseudogene	Gm9285	ENSMUST00000177691	unprocessed_pseudogene		12	-1	23367424	697
ENSMUSG00000103352	lincRNA	Gm38084	ENSMUST00000193488	lincRNA		Y	-1	13093901	437
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000154548	retained_intron		5	-1	76905492	1080
ENSMUSG00000022812	protein_coding	Gsk3b	ENSMUST00000023507	protein_coding	principal3	16	1	38089001	8303
ENSMUSG00000106124	IG_V_pseudogene	Gm42539	ENSMUST00000197009	IG_V_pseudogene		6	-1	68875823	308
ENSMUSG00000109504	unprocessed_pseudogene	Gm45156	ENSMUST00000207255	unprocessed_pseudogene		7	-1	18494916	439
ENSMUSG00000106661	processed_pseudogene	Gm42832	ENSMUST00000196361	processed_pseudogene		5	1	9968674	745
ENSMUSG00000020354	protein_coding	Sgcd	ENSMUST00000154578	processed_transcript		11	-1	47637469	4453
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000135954	protein_coding		5	-1	76905390	472
ENSMUSG00000113532	processed_pseudogene	Gm47393	ENSMUST00000221133	processed_pseudogene		12	-1	23426883	127
ENSMUSG00000113824	processed_pseudogene	Gm47420	ENSMUST00000221284	processed_pseudogene		12	-1	23435328	112
ENSMUSG00000035923	protein_coding	Myf6	ENSMUST00000044210	protein_coding	principal1	10	-1	107494737	1263
ENSMUSG00000022812	protein_coding	Gsk3b	ENSMUST00000114750	protein_coding	alternative1	16	1	38090288	1750
ENSMUSG00000074771	protein_coding	Ankef1	ENSMUST00000149712	nonsense_mediated_decay		2	1	136501991	3167
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000142450	protein_coding		5	-1	76905503	349
ENSMUSG00000109355	processed_pseudogene	Gm4880	ENSMUST00000207645	processed_pseudogene		7	-1	18511630	1696
ENSMUSG00000113451	processed_pseudogene	Gm47421	ENSMUST00000222220	processed_pseudogene		12	1	23465695	270
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000134805	processed_transcript		5	-1	76905428	521
ENSMUSG00000074141	protein_coding	Il4i1	ENSMUST00000118125	protein_coding	alternative2	7	1	44816396	2275
ENSMUSG00000002797	protein_coding	Ggct	ENSMUST00000131475	protein_coding	principal1	6	-1	54992950	3960
ENSMUSG00000093449	unprocessed_pseudogene	Vmn1r-ps149	ENSMUST00000176997	unprocessed_pseudogene		17	-1	21269470	183
ENSMUSG00000113035	processed_transcript	5830428M24Rik	ENSMUST00000223143	lincRNA		12	-1	69475547	1034
ENSMUSG00000074771	protein_coding	Ankef1	ENSMUST00000154343	processed_transcript		2	1	136502181	928
ENSMUSG00000079595	unprocessed_pseudogene	Gm7260	ENSMUST00000114851	unprocessed_pseudogene		16	-1	36391122	216
ENSMUSG00000055923	protein_coding	Aasdh	ENSMUST00000069709	protein_coding	principal1	5	-1	76902187	3381
ENSMUSG00000113035	processed_transcript	5830428M24Rik	ENSMUST00000221805	lincRNA		12	-1	69467392	825
ENSMUSG00000086107	antisense	Gm16312	ENSMUST00000156285	antisense		19	-1	4001232	362
ENSMUSG00000113035	processed_transcript	5830428M24Rik	ENSMUST00000222697	retained_intron		12	-1	69475521	706
ENSMUSG00000002797	protein_coding	Ggct	ENSMUST00000002874	processed_transcript		6	-1	54992707	686
ENSMUSG00000048538	processed_pseudogene	Gm9826	ENSMUST00000029124	processed_pseudogene		1	1	7177739	1299
ENSMUSG00000113035	processed_transcript	5830428M24Rik	ENSMUST00000222980	retained_intron		12	-1	69475550	988
ENSMUSG00000099611	protein_coding	Vmn1r189	ENSMUST00000227357	protein_coding	principal1	13	-1	22105824	3245
ENSMUSG00000099611	protein_coding	Vmn1r189	ENSMUST00000228428	protein_coding	principal1	13	-1	22105824	3231
ENSMUSG00000105630	IG_V_gene	Gm42543	ENSMUST00000198756	IG_V_gene	principal1	6	-1	68880674	353
ENSMUSG00000024869	protein_coding	Gm49405	ENSMUST00000155405	nonsense_mediated_decay	principal1	19	1	4000626	3904
ENSMUSG00000002797	protein_coding	Ggct	ENSMUST00000204301	nonsense_mediated_decay		6	-1	54992861	431
ENSMUSG00000099611	protein_coding	Vmn1r189	ENSMUST00000186062	protein_coding	principal1	13	-1	22102764	1137
ENSMUSG00000074141	protein_coding	Il4i1	ENSMUST00000033015	protein_coding	principal3	7	1	44836287	2048
ENSMUSG00000105267	IG_V_pseudogene	Gm42542	ENSMUST00000197978	IG_V_pseudogene		6	-1	68893982	268
ENSMUSG00000086046	antisense	1700095A21Rik	ENSMUST00000145269	antisense		4	-1	146546873	1069
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000176216	protein_coding		5	-1	136567248	2821
ENSMUSG00000022812	protein_coding	Gsk3b	ENSMUST00000134870	processed_transcript		16	1	38143331	713
ENSMUSG00000002797	protein_coding	Ggct	ENSMUST00000203208	protein_coding		6	-1	54992863	401
ENSMUSG00000022812	protein_coding	Gsk3b	ENSMUST00000132057	retained_intron		16	1	38144295	2186
ENSMUSG00000002797	protein_coding	Ggct	ENSMUST00000136527	retained_intron		6	-1	54992863	657
ENSMUSG00000074141	protein_coding	Il4i1	ENSMUST00000149686	retained_intron		7	1	44836291	1404
ENSMUSG00000022812	protein_coding	Gsk3b	ENSMUST00000231437	protein_coding		16	1	38208038	656
ENSMUSG00000002797	protein_coding	Ggct	ENSMUST00000204770	retained_intron		6	-1	54992624	3509
ENSMUSG00000079544	IG_V_pseudogene	Igkv13-87	ENSMUST00000114214	IG_V_pseudogene		6	1	68902981	286
ENSMUSG00000075249	protein_coding	Fsip2	ENSMUST00000143764	protein_coding	principal1	2	1	82943634	21116
ENSMUSG00000084793	processed_pseudogene	Gm2568	ENSMUST00000146126	processed_pseudogene		12	-1	57520624	1166
ENSMUSG00000074141	protein_coding	Il4i1	ENSMUST00000124695	retained_intron		7	1	44838691	865
ENSMUSG00000075249	protein_coding	Fsip2	ENSMUST00000136202	nonsense_mediated_decay		2	1	82949500	740
ENSMUSG00000103704	TEC	Gm37291	ENSMUST00000195637	TEC		12	1	57525726	533
ENSMUSG00000044966	protein_coding	Fbxo48	ENSMUST00000109635	protein_coding	principal1	11	1	16951375	1098
ENSMUSG00000074141	protein_coding	Il4i1	ENSMUST00000133279	protein_coding		7	1	44839198	467
ENSMUSG00000075249	protein_coding	Fsip2	ENSMUST00000132967	nonsense_mediated_decay		2	1	82980796	3932
ENSMUSG00000112249	lincRNA	Gm30262	ENSMUST00000219137	lincRNA		10	1	111599177	791
ENSMUSG00000026117	protein_coding	Zap70	ENSMUST00000027291	protein_coding	principal1	1	1	36761798	2245
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000176745	protein_coding		5	-1	136567264	2831
ENSMUSG00000003545	protein_coding	Fosb	ENSMUST00000003640	protein_coding	principal1	7	-1	19310051	3782
ENSMUSG00000020717	protein_coding	Pecam1	ENSMUST00000103069	protein_coding		11	-1	106715265	3233
ENSMUSG00000026117	protein_coding	Zap70	ENSMUST00000185871	protein_coding		1	1	36766934	454
ENSMUSG00000035451	protein_coding	Foxa1	ENSMUST00000044380	protein_coding	principal1	12	-1	57546121	3191
ENSMUSG00000076680	IG_V_gene	Ighv6-6	ENSMUST00000103489	IG_V_gene	principal1	12	-1	114435244	357
ENSMUSG00000026117	protein_coding	Zap70	ENSMUST00000186624	retained_intron		1	1	36770992	808
ENSMUSG00000087582	IG_V_gene	Ighv6-7	ENSMUST00000193397	IG_V_gene	principal1	12	-1	114456083	357
ENSMUSG00000021259	protein_coding	Cyp46a1	ENSMUST00000021684	protein_coding	principal1	12	1	108334381	2118
ENSMUSG00000044966	protein_coding	Fbxo48	ENSMUST00000061327	protein_coding	principal1	11	1	16951410	2117
ENSMUSG00000102301	IG_V_gene	Ighv8-2	ENSMUST00000195037	IG_V_gene	principal1	12	-1	114462730	359
ENSMUSG00000035451	protein_coding	Foxa1	ENSMUST00000218398	processed_transcript		12	-1	57546916	414
ENSMUSG00000102082	lincRNA	Gm28675	ENSMUST00000191096	lincRNA		2	-1	83126216	675
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000175918	nonsense_mediated_decay		5	-1	136567278	2565
ENSMUSG00000021259	protein_coding	Cyp46a1	ENSMUST00000221708	nonsense_mediated_decay		12	1	108334467	1034
ENSMUSG00000056300	protein_coding	Zfp981	ENSMUST00000105735	protein_coding	principal1	4	1	146502027	3038
ENSMUSG00000096618	unprocessed_pseudogene	Gm9286	ENSMUST00000173586	unprocessed_pseudogene		12	-1	23484992	508
ENSMUSG00000043557	protein_coding	Mdga1	ENSMUST00000171691	protein_coding	principal1	17	-1	29888708	8425
ENSMUSG00000081400	processed_pseudogene	Gm13680	ENSMUST00000119790	processed_pseudogene		2	-1	83353949	793
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000177297	nonsense_mediated_decay		5	-1	136567263	1926
ENSMUSG00000113487	processed_pseudogene	Gm47422	ENSMUST00000221097	processed_pseudogene		12	-1	23503294	120
ENSMUSG00000020354	protein_coding	Sgcd	ENSMUST00000077221	protein_coding	principal1	11	-1	47379522	1617
ENSMUSG00000024064	protein_coding	Galnt14	ENSMUST00000024858	protein_coding	principal1	17	-1	73710451	2990
ENSMUSG00000023009	protein_coding	Nckap5l	ENSMUST00000023747	protein_coding	principal1	15	-1	99457748	4853
ENSMUSG00000021259	protein_coding	Cyp46a1	ENSMUST00000222902	retained_intron		12	1	108346085	733
ENSMUSG00000037795	protein_coding	N4bp2	ENSMUST00000201489	protein_coding	principal1	5	1	65763521	9055
ENSMUSG00000003545	protein_coding	Fosb	ENSMUST00000207334	protein_coding		7	-1	19310046	3664
ENSMUSG00000026117	protein_coding	Zap70	ENSMUST00000190128	retained_intron		1	1	36778984	1338
ENSMUSG00000020354	protein_coding	Sgcd	ENSMUST00000109220	protein_coding		11	-1	47578965	2450
ENSMUSG00000021259	protein_coding	Cyp46a1	ENSMUST00000222240	retained_intron		12	1	108352224	764
ENSMUSG00000102524	IG_V_pseudogene	Ighv1-2	ENSMUST00000195325	IG_V_pseudogene		12	-1	114469535	378
ENSMUSG00000024064	protein_coding	Galnt14	ENSMUST00000232785	processed_transcript		17	-1	73542045	1840
ENSMUSG00000056300	protein_coding	Zfp981	ENSMUST00000140089	protein_coding		4	1	146514920	578
ENSMUSG00000097291	transcribed_processed_pseudogene	Gm18828	ENSMUST00000181035	processed_transcript		1	-1	36765172	310
ENSMUSG00000020354	protein_coding	Sgcd	ENSMUST00000128558	processed_transcript		11	-1	47988969	892
ENSMUSG00000097291	transcribed_processed_pseudogene	Gm18828	ENSMUST00000180475	transcribed_processed_pseudogene		1	-1	36765874	857
ENSMUSG00000056300	protein_coding	Zfp981	ENSMUST00000179175	protein_coding	principal1	4	1	146514920	2953
ENSMUSG00000023009	protein_coding	Nckap5l	ENSMUST00000161004	protein_coding		15	-1	99424537	336
ENSMUSG00000003545	protein_coding	Fosb	ENSMUST00000208505	protein_coding		7	-1	19310046	3523
ENSMUSG00000024064	protein_coding	Galnt14	ENSMUST00000112591	protein_coding		17	-1	73710415	1843
ENSMUSG00000083291	processed_pseudogene	Gm13679	ENSMUST00000118678	processed_pseudogene		2	1	83390129	484
ENSMUSG00000033596	protein_coding	Rfwd3	ENSMUST00000038739	protein_coding	principal1	8	-1	111300222	4443
ENSMUSG00000023009	protein_coding	Nckap5l	ENSMUST00000160500	processed_transcript		15	-1	99424533	325
ENSMUSG00000023009	protein_coding	Nckap5l	ENSMUST00000161948	protein_coding		15	-1	99457712	506
ENSMUSG00000003545	protein_coding	Fosb	ENSMUST00000207716	protein_coding		7	-1	19310046	3546
ENSMUSG00000024064	protein_coding	Galnt14	ENSMUST00000233326	retained_intron		17	-1	73710066	1321
ENSMUSG00000027598	protein_coding	Itch	ENSMUST00000029126	protein_coding	principal1	2	1	155133509	5159
ENSMUSG00000003545	protein_coding	Fosb	ENSMUST00000208326	protein_coding		7	-1	19310046	3654
ENSMUSG00000035172	protein_coding	Plekhh3	ENSMUST00000129895	nonsense_mediated_decay		11	-1	101170955	2635
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000110336	protein_coding	alternative1	15	-1	38078854	9242
ENSMUSG00000116249	processed_transcript	Gm49484	ENSMUST00000229706	retained_intron		15	-1	99460109	2176
ENSMUSG00000054142	protein_coding	Vmn1r236	ENSMUST00000235320	processed_transcript		17	1	21282942	5987
ENSMUSG00000095981	IG_V_gene	Ighv10-1	ENSMUST00000103492	IG_V_gene	principal1	12	-1	114479451	359
ENSMUSG00000024064	protein_coding	Galnt14	ENSMUST00000146565	retained_intron		17	-1	73710453	2713
ENSMUSG00000018451	protein_coding	6330403K07Rik	ENSMUST00000238695	protein_coding	principal1	11	-1	71033513	1573
ENSMUSG00000054142	protein_coding	Vmn1r236	ENSMUST00000236535	processed_transcript		17	1	21282942	5901
ENSMUSG00000117023	antisense	Gm49876	ENSMUST00000233268	antisense		17	1	73494251	568
ENSMUSG00000116249	processed_transcript	Gm49484	ENSMUST00000229053	lincRNA		15	-1	99465328	2278
ENSMUSG00000037795	protein_coding	N4bp2	ENSMUST00000201503	retained_intron		5	1	65763979	632
ENSMUSG00000027598	protein_coding	Itch	ENSMUST00000138468	retained_intron		2	1	155133524	3711
ENSMUSG00000054142	protein_coding	Vmn1r236	ENSMUST00000236545	protein_coding	alternative2	17	1	21282942	7528
ENSMUSG00000003545	protein_coding	Fosb	ENSMUST00000208446	protein_coding		7	-1	19309600	1090
ENSMUSG00000054142	protein_coding	Vmn1r236	ENSMUST00000235527	protein_coding	alternative2	17	1	21282942	7573
ENSMUSG00000033596	protein_coding	Rfwd3	ENSMUST00000212958	retained_intron		8	-1	111300191	4082
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000226369	retained_intron		15	-1	37978081	3562
ENSMUSG00000003545	protein_coding	Fosb	ENSMUST00000208230	retained_intron		7	-1	19310044	3629
ENSMUSG00000047044	protein_coding	D030056L22Rik	ENSMUST00000062753	protein_coding	alternative2	19	1	18713193	1677
ENSMUSG00000070798	protein_coding	Psg25	ENSMUST00000094795	protein_coding	principal1	7	-1	18532269	3109
ENSMUSG00000040569	protein_coding	Slc26a7	ENSMUST00000042221	protein_coding	principal1	4	-1	14621805	5165
ENSMUSG00000037795	protein_coding	N4bp2	ENSMUST00000202934	processed_transcript		5	1	65763979	622
ENSMUSG00000054142	protein_coding	Vmn1r236	ENSMUST00000066998	protein_coding	principal2	17	1	21286533	1121
ENSMUSG00000024871	protein_coding	Doc2g	ENSMUST00000025806	protein_coding	principal1	19	1	4003313	1469
ENSMUSG00000037795	protein_coding	N4bp2	ENSMUST00000201615	protein_coding		5	1	65764120	4767
ENSMUSG00000108854	lincRNA	D830036C21Rik	ENSMUST00000207444	lincRNA		7	-1	19342225	453
ENSMUSG00000090168	sense_intronic	D630014O11Rik	ENSMUST00000160562	sense_intronic		17	-1	73640220	3019
ENSMUSG00000108854	lincRNA	D830036C21Rik	ENSMUST00000208263	lincRNA		7	-1	19342515	1548
ENSMUSG00000037795	protein_coding	N4bp2	ENSMUST00000202817	retained_intron		5	1	65782948	2154
ENSMUSG00000081469	unprocessed_pseudogene	Vmn1r-ps95	ENSMUST00000118641	unprocessed_pseudogene		13	1	22123289	903
ENSMUSG00000114368	processed_pseudogene	Gm47953	ENSMUST00000224570	processed_pseudogene		14	1	62012319	315
ENSMUSG00000037795	protein_coding	N4bp2	ENSMUST00000200843	retained_intron		5	1	65801073	3135
ENSMUSG00000043557	protein_coding	Mdga1	ENSMUST00000167190	nonsense_mediated_decay		17	-1	29970087	6541
ENSMUSG00000020717	protein_coding	Pecam1	ENSMUST00000080853	protein_coding	principal3	11	-1	106715259	3283
ENSMUSG00000115531	lincRNA	Gm35419	ENSMUST00000226702	lincRNA		14	-1	62171126	678
ENSMUSG00000018451	protein_coding	6330403K07Rik	ENSMUST00000156068	nonsense_mediated_decay		11	-1	71033513	1494
ENSMUSG00000047044	protein_coding	D030056L22Rik	ENSMUST00000055792	protein_coding	principal2	19	1	18713236	1631
ENSMUSG00000038539	protein_coding	Atf5	ENSMUST00000047356	protein_coding	principal1	7	-1	44816658	1816
ENSMUSG00000037795	protein_coding	N4bp2	ENSMUST00000202411	retained_intron		5	1	65809731	574
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000226414	protein_coding	principal2	15	-1	38078425	8397
ENSMUSG00000095564	transcribed_unprocessed_pseudogene	Gm20474	ENSMUST00000220772	processed_transcript		12	-1	23572187	462
ENSMUSG00000040569	protein_coding	Slc26a7	ENSMUST00000138042	processed_transcript		4	-1	14516369	691
ENSMUSG00000043557	protein_coding	Mdga1	ENSMUST00000168044	protein_coding		17	-1	29839910	951
ENSMUSG00000021792	protein_coding	Prxl2a	ENSMUST00000022317	protein_coding		14	-1	41013775	1537
ENSMUSG00000095564	transcribed_unprocessed_pseudogene	Gm20474	ENSMUST00000180089	transcribed_unprocessed_pseudogene		12	-1	23573981	596
ENSMUSG00000109366	lincRNA	Gm44698	ENSMUST00000207382	lincRNA		7	1	19333129	384
ENSMUSG00000037795	protein_coding	N4bp2	ENSMUST00000201044	retained_intron		5	1	65825242	424
ENSMUSG00000037795	protein_coding	N4bp2	ENSMUST00000087264	protein_coding	principal1	5	1	65764120	5308
ENSMUSG00000040569	protein_coding	Slc26a7	ENSMUST00000149633	protein_coding		4	-1	14621497	715
ENSMUSG00000112079	processed_pseudogene	Gm19599	ENSMUST00000218898	processed_pseudogene		12	1	49499008	358
ENSMUSG00000114620	unprocessed_pseudogene	Vmn1r-ps96	ENSMUST00000226037	unprocessed_pseudogene		13	1	22126741	299
ENSMUSG00000032458	protein_coding	Copb2	ENSMUST00000188913	retained_intron		9	1	98563721	2629
ENSMUSG00000040569	protein_coding	Slc26a7	ENSMUST00000143105	protein_coding		4	-1	14621669	362
ENSMUSG00000067714	protein_coding	Lpar5	ENSMUST00000088292	protein_coding	principal1	6	1	125067920	1393
ENSMUSG00000024871	protein_coding	Doc2g	ENSMUST00000147806	retained_intron		19	1	4003321	1589
ENSMUSG00000083167	unprocessed_pseudogene	Vmn1r-ps97	ENSMUST00000118338	unprocessed_pseudogene		13	-1	22137026	603
ENSMUSG00000091487	unprocessed_pseudogene	Gm6586	ENSMUST00000167028	unprocessed_pseudogene		5	1	10067365	643
ENSMUSG00000117878	lincRNA	Gm50202	ENSMUST00000237961	lincRNA		19	-1	18732776	701
ENSMUSG00000020717	protein_coding	Pecam1	ENSMUST00000183610	protein_coding		11	-1	106715262	3006
ENSMUSG00000024871	protein_coding	Doc2g	ENSMUST00000138917	retained_intron		19	1	4003325	2350
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000228804	retained_intron		15	-1	37970615	522
ENSMUSG00000106682	TEC	Gm42648	ENSMUST00000200774	TEC		5	1	65778014	2505
ENSMUSG00000024871	protein_coding	Doc2g	ENSMUST00000236482	protein_coding		19	1	4003389	742
ENSMUSG00000085941	antisense	Gm11201	ENSMUST00000143473	antisense		11	1	79023597	701
ENSMUSG00000022902	protein_coding	Stfa2	ENSMUST00000023619	protein_coding	principal1	16	-1	36408457	471
ENSMUSG00000112605	processed_pseudogene	Gm7476	ENSMUST00000220112	processed_pseudogene		12	-1	49776775	661
ENSMUSG00000112997	processed_pseudogene	Gm49386	ENSMUST00000220467	processed_pseudogene		12	-1	23634475	126
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000226629	retained_intron		15	-1	37973358	457
ENSMUSG00000043557	protein_coding	Mdga1	ENSMUST00000165528	retained_intron		17	-1	29842421	1477
ENSMUSG00000106978	processed_transcript	N4bp2os	ENSMUST00000202673	antisense		5	-1	65763866	699
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000228333	nonsense_mediated_decay		15	-1	37979821	507
ENSMUSG00000024871	protein_coding	Doc2g	ENSMUST00000127016	retained_intron		19	1	4003700	850
ENSMUSG00000074771	protein_coding	Ankef1	ENSMUST00000123214	protein_coding		2	1	136515519	1633
ENSMUSG00000020717	protein_coding	Pecam1	ENSMUST00000106796	protein_coding	alternative2	11	-1	106715394	3441
ENSMUSG00000024871	protein_coding	Doc2g	ENSMUST00000235829	retained_intron		19	1	4003863	690
ENSMUSG00000021792	protein_coding	Prxl2a	ENSMUST00000118466	protein_coding	principal1	14	-1	41013788	1567
ENSMUSG00000100760	lincRNA	Gm4035	ENSMUST00000189445	lincRNA		13	-1	37424279	399
ENSMUSG00000043557	protein_coding	Mdga1	ENSMUST00000170786	processed_transcript		17	-1	29835358	761
ENSMUSG00000102058	lincRNA	Gm28470	ENSMUST00000186912	lincRNA		Y	-1	35984200	1498
ENSMUSG00000028871	protein_coding	Rspo1	ENSMUST00000030687	protein_coding	principal1	4	1	124986430	1834
ENSMUSG00000038539	protein_coding	Atf5	ENSMUST00000107893	protein_coding	principal1	7	-1	44815658	1735
ENSMUSG00000035172	protein_coding	Plekhh3	ENSMUST00000043397	protein_coding	principal3	11	-1	101171351	3056
ENSMUSG00000043557	protein_coding	Mdga1	ENSMUST00000234251	protein_coding		17	-1	29839981	478
ENSMUSG00000020717	protein_coding	Pecam1	ENSMUST00000184424	retained_intron		11	-1	106663326	2142
ENSMUSG00000067714	protein_coding	Lpar5	ENSMUST00000140346	protein_coding		6	1	125071277	794
ENSMUSG00000106978	processed_transcript	N4bp2os	ENSMUST00000201547	antisense		5	-1	65763357	235
ENSMUSG00000067714	protein_coding	Lpar5	ENSMUST00000171989	protein_coding	principal1	6	1	125071277	1458
ENSMUSG00000115474	lincRNA	4930430F21Rik	ENSMUST00000227771	lincRNA		15	1	31039128	802
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000228292	retained_intron		15	-1	37991637	707
ENSMUSG00000027598	protein_coding	Itch	ENSMUST00000142147	processed_transcript		2	1	155133531	1774
ENSMUSG00000043557	protein_coding	Mdga1	ENSMUST00000234114	processed_transcript		17	-1	29850541	201
ENSMUSG00000106978	processed_transcript	N4bp2os	ENSMUST00000202069	retained_intron		5	-1	65764379	2008
ENSMUSG00000028871	protein_coding	Rspo1	ENSMUST00000140698	processed_transcript		4	1	125007480	446
ENSMUSG00000100760	lincRNA	Gm4035	ENSMUST00000190684	lincRNA		13	-1	37435149	526
ENSMUSG00000021792	protein_coding	Prxl2a	ENSMUST00000136661	protein_coding		14	-1	41008266	695
ENSMUSG00000116905	unprocessed_pseudogene	Gm49652	ENSMUST00000231911	unprocessed_pseudogene		16	-1	36420921	417
ENSMUSG00000102058	lincRNA	Gm28470	ENSMUST00000190482	lincRNA		Y	-1	35983747	438
ENSMUSG00000020717	protein_coding	Pecam1	ENSMUST00000068021	protein_coding	alternative2	11	-1	106750628	2977
ENSMUSG00000035172	protein_coding	Plekhh3	ENSMUST00000156320	processed_transcript		11	-1	101165324	890
ENSMUSG00000038539	protein_coding	Atf5	ENSMUST00000209072	protein_coding		7	-1	44816574	595
ENSMUSG00000102058	lincRNA	Gm28470	ENSMUST00000190138	lincRNA		Y	-1	35983747	621
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000228174	retained_intron		15	-1	38001295	1360
ENSMUSG00000087011	antisense	Gm12930	ENSMUST00000146679	antisense		4	-1	124987009	676
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000022386	protein_coding	principal4	14	1	46882854	4564
ENSMUSG00000098219	processed_pseudogene	Gm7481	ENSMUST00000182020	processed_pseudogene		12	-1	49841751	995
ENSMUSG00000021792	protein_coding	Prxl2a	ENSMUST00000134715	protein_coding		14	-1	41006976	508
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000226137	retained_intron		15	-1	38000127	664
ENSMUSG00000027598	protein_coding	Itch	ENSMUST00000109685	protein_coding	principal1	2	1	155133559	5309
ENSMUSG00000020717	protein_coding	Pecam1	ENSMUST00000135481	retained_intron		11	-1	106691347	681
ENSMUSG00000100034	lincRNA	Gm28469	ENSMUST00000186374	lincRNA		Y	1	36015725	2166
ENSMUSG00000035172	protein_coding	Plekhh3	ENSMUST00000123864	protein_coding		11	-1	101170354	785
ENSMUSG00000112353	lincRNA	Gm40418	ENSMUST00000218806	lincRNA		12	1	50120309	1013
ENSMUSG00000020629	protein_coding	Adi1	ENSMUST00000020957	protein_coding	principal1	12	1	28675231	1652
ENSMUSG00000029328	protein_coding	Hnrnpdl	ENSMUST00000135424	processed_transcript		5	-1	100036068	1842
ENSMUSG00000020717	protein_coding	Pecam1	ENSMUST00000124958	protein_coding		11	-1	106714946	1020
ENSMUSG00000043557	protein_coding	Mdga1	ENSMUST00000165211	processed_transcript		17	-1	29887482	669
ENSMUSG00000099589	unprocessed_pseudogene	Gm21898	ENSMUST00000190727	unprocessed_pseudogene		Y	1	36025182	696
ENSMUSG00000081952	processed_pseudogene	Gm12178	ENSMUST00000120545	processed_pseudogene		11	-1	48290313	330
ENSMUSG00000070797	protein_coding	Psg27	ENSMUST00000094794	protein_coding	principal1	7	-1	18567305	1942
ENSMUSG00000021792	protein_coding	Prxl2a	ENSMUST00000152837	protein_coding		14	-1	41006920	367
ENSMUSG00000110578	unprocessed_pseudogene	Olfr858-ps1	ENSMUST00000212591	unprocessed_pseudogene		9	1	19737451	930
ENSMUSG00000114791	lincRNA	Gm47730	ENSMUST00000223647	lincRNA		13	-1	37440454	645
ENSMUSG00000114791	lincRNA	Gm47730	ENSMUST00000226104	lincRNA		13	-1	37440454	526
ENSMUSG00000114791	lincRNA	Gm47730	ENSMUST00000224029	lincRNA		13	-1	37440454	521
ENSMUSG00000021792	protein_coding	Prxl2a	ENSMUST00000130166	protein_coding		14	-1	41004979	637
ENSMUSG00000105173	processed_pseudogene	Gm5715	ENSMUST00000196854	processed_pseudogene		5	1	10116583	1465
ENSMUSG00000110568	transcribed_unprocessed_pseudogene	Gm7208	ENSMUST00000212442	transcribed_unprocessed_pseudogene		8	-1	104682211	1627
ENSMUSG00000035172	protein_coding	Plekhh3	ENSMUST00000164474	protein_coding	alternative2	11	-1	101171317	3010
ENSMUSG00000020629	protein_coding	Adi1	ENSMUST00000135772	processed_transcript		12	1	28675484	1131
ENSMUSG00000110568	transcribed_unprocessed_pseudogene	Gm7208	ENSMUST00000160034	processed_transcript		8	-1	104677275	349
ENSMUSG00000110568	transcribed_unprocessed_pseudogene	Gm7208	ENSMUST00000212975	processed_transcript		8	-1	104679695	791
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000228504	processed_transcript		15	-1	38011816	654
ENSMUSG00000100263	unprocessed_pseudogene	Gm28468	ENSMUST00000188536	unprocessed_pseudogene		Y	1	36062048	615
ENSMUSG00000027598	protein_coding	Itch	ENSMUST00000123497	retained_intron		2	1	155133561	2480
ENSMUSG00000043557	protein_coding	Mdga1	ENSMUST00000167102	processed_transcript		17	-1	29889960	596
ENSMUSG00000083954	processed_pseudogene	Gm12179	ENSMUST00000118344	processed_pseudogene		11	-1	48552524	1272
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000228101	retained_intron		15	-1	38009504	634
ENSMUSG00000079139	processed_pseudogene	Gm4204	ENSMUST00000110798	processed_pseudogene		1	1	135231995	1231
ENSMUSG00000089973	unprocessed_pseudogene	Vmn1r190-ps	ENSMUST00000155950	unprocessed_pseudogene		13	-1	22145343	903
ENSMUSG00000020629	protein_coding	Adi1	ENSMUST00000138081	processed_transcript		12	1	28677805	441
ENSMUSG00000037487	protein_coding	Ubr5	ENSMUST00000227143	protein_coding		15	-1	38015053	596
ENSMUSG00000100932	lincRNA	Gm29459	ENSMUST00000191359	lincRNA		13	-1	37451157	518
ENSMUSG00000082596	processed_pseudogene	Gm14227	ENSMUST00000119431	processed_pseudogene		2	-1	155199260	629
ENSMUSG00000043557	protein_coding	Mdga1	ENSMUST00000073556	protein_coding		17	-1	29887882	7566
ENSMUSG00000110949	protein_coding	Nudt8	ENSMUST00000025802	protein_coding	principal1	19	1	4000580	787
ENSMUSG00000082424	processed_pseudogene	Gm13292	ENSMUST00000120014	processed_pseudogene		2	-1	11410030	1000
ENSMUSG00000108884	antisense	Gm45792	ENSMUST00000207795	antisense		7	-1	119631058	4268
ENSMUSG00000113719	unprocessed_pseudogene	Gm9305	ENSMUST00000220962	unprocessed_pseudogene		12	-1	23714509	599
ENSMUSG00000083347	processed_pseudogene	Gm13913	ENSMUST00000121126	processed_pseudogene		2	-1	108578389	260
ENSMUSG00000021792	protein_coding	Prxl2a	ENSMUST00000143143	protein_coding		14	-1	41013771	688
ENSMUSG00000099847	lincRNA	Gm29458	ENSMUST00000187093	lincRNA		13	-1	37453208	354
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000228404	protein_coding	alternative2	14	1	46882980	3039
ENSMUSG00000021792	protein_coding	Prxl2a	ENSMUST00000128236	protein_coding		14	-1	41013771	450
ENSMUSG00000073226	lincRNA	Gm10482	ENSMUST00000190891	lincRNA		5	1	10187866	1613
ENSMUSG00000044052	protein_coding	Ccr10	ENSMUST00000062759	protein_coding	principal1	11	-1	101175443	1726
ENSMUSG00000083159	processed_pseudogene	Gm12180	ENSMUST00000120905	processed_pseudogene		11	1	48568355	661
ENSMUSG00000035509	protein_coding	Fbxl21	ENSMUST00000121095	protein_coding		13	1	56522472	798
ENSMUSG00000109525	processed_pseudogene	Gm19091	ENSMUST00000208120	processed_pseudogene		7	-1	18579022	978
ENSMUSG00000073226	lincRNA	Gm10482	ENSMUST00000189825	lincRNA		5	1	10187872	2287
ENSMUSG00000073226	lincRNA	Gm10482	ENSMUST00000101606	lincRNA		5	1	10236829	633
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000100672	protein_coding	alternative2	14	1	46882989	4165
ENSMUSG00000110949	protein_coding	Nudt8	ENSMUST00000122924	retained_intron		19	1	4000631	1082
ENSMUSG00000082250	processed_pseudogene	Gm12181	ENSMUST00000121448	processed_pseudogene		11	1	48595279	531
ENSMUSG00000100895	processed_pseudogene	Gm28685	ENSMUST00000187545	processed_pseudogene		5	-1	10236971	1101
ENSMUSG00000086534	antisense	Gm16758	ENSMUST00000149552	antisense		17	1	29890084	3848
ENSMUSG00000019900	protein_coding	Rfx6	ENSMUST00000217662	retained_intron		10	1	51677756	1896
ENSMUSG00000021792	protein_coding	Prxl2a	ENSMUST00000153830	protein_coding		14	-1	41004533	1003
ENSMUSG00000106891	TEC	Gm43460	ENSMUST00000202491	TEC		5	1	147428830	1057
ENSMUSG00000021792	protein_coding	Prxl2a	ENSMUST00000135797	retained_intron		14	-1	41003104	781
ENSMUSG00000114701	lincRNA	Gm47731	ENSMUST00000225986	lincRNA		13	1	37472038	582
ENSMUSG00000101575	unprocessed_pseudogene	Gm20898	ENSMUST00000185598	unprocessed_pseudogene		Y	1	36091591	693
ENSMUSG00000111871	lincRNA	Gm47557	ENSMUST00000214014	lincRNA		9	1	13945281	1833
ENSMUSG00000113054	lincRNA	Gm47514	ENSMUST00000222688	lincRNA		13	-1	6029004	634
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000141767	processed_transcript		14	1	46883506	385
ENSMUSG00000017167	protein_coding	Cntnap1	ENSMUST00000138942	processed_transcript		11	1	101170523	664
ENSMUSG00000082314	processed_pseudogene	Gm13296	ENSMUST00000117854	processed_pseudogene		2	1	11420224	997
ENSMUSG00000083460	processed_pseudogene	Gm12182	ENSMUST00000118655	processed_pseudogene		11	-1	48735561	1008
ENSMUSG00000101909	processed_pseudogene	Gm28724	ENSMUST00000186149	processed_pseudogene		1	1	142723147	625
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000137543	protein_coding	alternative2	14	1	46884175	6874
ENSMUSG00000114573	lincRNA	Gm47732	ENSMUST00000223569	lincRNA		13	1	37482385	620
ENSMUSG00000100785	unprocessed_pseudogene	Gm29333	ENSMUST00000189258	unprocessed_pseudogene		Y	1	36165503	696
ENSMUSG00000103890	processed_pseudogene	Gm28724	ENSMUST00000194218	processed_pseudogene		1	1	142722856	295
ENSMUSG00000102818	TEC	Gm37796	ENSMUST00000195327	TEC		1	1	142755193	134
ENSMUSG00000114389	lincRNA	Gm47734	ENSMUST00000225935	lincRNA		13	-1	37507752	533
ENSMUSG00000082454	processed_pseudogene	Gm12183	ENSMUST00000120566	processed_pseudogene		11	-1	48753714	1848
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000090243	protein_coding	principal1	6	-1	39377675	4030
ENSMUSG00000074771	protein_coding	Ankef1	ENSMUST00000028726	nonsense_mediated_decay		2	1	136532212	3089
ENSMUSG00000111489	lincRNA	1700019J19Rik	ENSMUST00000216531	lincRNA		9	1	14089620	2813
ENSMUSG00000042462	protein_coding	Dctpp1	ENSMUST00000035276	protein_coding	principal1	7	-1	127260709	676
ENSMUSG00000102335	lincRNA	Gm37231	ENSMUST00000191716	lincRNA		Y	-1	13122400	621
ENSMUSG00000035509	protein_coding	Fbxl21	ENSMUST00000121871	protein_coding		13	1	56522491	1963
ENSMUSG00000102335	lincRNA	Gm37231	ENSMUST00000195184	lincRNA		Y	-1	13122400	437
ENSMUSG00000100022	lincRNA	Gm29590	ENSMUST00000190396	lincRNA		13	1	37508940	1304
ENSMUSG00000111489	lincRNA	1700019J19Rik	ENSMUST00000213391	lincRNA		9	1	14090077	973
ENSMUSG00000100022	lincRNA	Gm29590	ENSMUST00000224251	lincRNA		13	1	37509126	697
ENSMUSG00000113483	lincRNA	Gm47548	ENSMUST00000221918	lincRNA		13	-1	6073782	372
ENSMUSG00000100022	lincRNA	Gm29590	ENSMUST00000225227	lincRNA		13	1	37509718	1135
ENSMUSG00000100022	lincRNA	Gm29590	ENSMUST00000224398	lincRNA		13	1	37509718	1166
ENSMUSG00000083697	processed_pseudogene	Gm13914	ENSMUST00000118202	processed_pseudogene		2	-1	108734202	991
ENSMUSG00000074771	protein_coding	Ankef1	ENSMUST00000121717	protein_coding	principal1	2	1	136532280	2875
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000125113	protein_coding	alternative2	14	1	47001315	2442
ENSMUSG00000069355	protein_coding	Gm5152	ENSMUST00000081735	protein_coding		5	-1	10246492	824
ENSMUSG00000111489	lincRNA	1700019J19Rik	ENSMUST00000216103	lincRNA		9	1	14090209	896
ENSMUSG00000069355	protein_coding	Gm5152	ENSMUST00000088625	protein_coding	principal1	5	-1	10246526	417
ENSMUSG00000111489	lincRNA	1700019J19Rik	ENSMUST00000213583	lincRNA		9	1	14101964	1856
ENSMUSG00000111489	lincRNA	1700019J19Rik	ENSMUST00000214881	lincRNA		9	1	14103592	861
ENSMUSG00000111479	lincRNA	Gm47559	ENSMUST00000217369	lincRNA		9	-1	14108123	498
ENSMUSG00000074771	protein_coding	Ankef1	ENSMUST00000131970	processed_transcript		2	1	136552919	364
ENSMUSG00000035509	protein_coding	Fbxl21	ENSMUST00000128668	nonsense_mediated_decay		13	1	56522508	1965
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000140571	processed_transcript		14	1	47001340	552
ENSMUSG00000035509	protein_coding	Fbxl21	ENSMUST00000124981	nonsense_mediated_decay		13	1	56522513	3507
ENSMUSG00000074771	protein_coding	Ankef1	ENSMUST00000138967	processed_transcript		2	1	136552934	613
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000226684	retained_intron		14	1	47001365	383
ENSMUSG00000074771	protein_coding	Ankef1	ENSMUST00000180246	protein_coding	principal1	2	1	136515515	2726
ENSMUSG00000081220	processed_pseudogene	Gm14542	ENSMUST00000118460	processed_pseudogene		X	-1	37037325	1248
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000125688	protein_coding		14	1	47068974	1773
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000165766	protein_coding		9	1	21424908	3063
ENSMUSG00000044400	protein_coding	Sowahd	ENSMUST00000060057	protein_coding	principal1	X	1	37048845	1574
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000227848	nonsense_mediated_decay		14	1	47077562	505
ENSMUSG00000021838	protein_coding	Samd4	ENSMUST00000130046	processed_transcript		14	1	47087135	527
ENSMUSG00000027952	protein_coding	Pmvk	ENSMUST00000198440	protein_coding		3	1	89454541	978
ENSMUSG00000035509	protein_coding	Fbxl21	ENSMUST00000045428	protein_coding	principal1	13	1	56522508	1965
ENSMUSG00000021294	protein_coding	Kif26a	ENSMUST00000128402	protein_coding	principal1	12	1	112146208	6918
ENSMUSG00000115410	antisense	2810457G06Rik	ENSMUST00000228355	antisense		14	-1	46885064	1367
ENSMUSG00000112434	processed_pseudogene	Gm7594	ENSMUST00000218595	processed_pseudogene		10	-1	68692373	871
ENSMUSG00000105708	processed_transcript	Gm36070	ENSMUST00000200467	lincRNA		3	-1	94360842	961
ENSMUSG00000021294	protein_coding	Kif26a	ENSMUST00000183816	processed_transcript		12	1	112179154	429
ENSMUSG00000105708	processed_transcript	Gm36070	ENSMUST00000196531	retained_intron		3	-1	94359212	1887
ENSMUSG00000109579	lincRNA	Gm35521	ENSMUST00000211285	lincRNA		8	-1	64417100	440
ENSMUSG00000107761	TEC	2010008C14Rik	ENSMUST00000203956	TEC		6	1	125083437	593
ENSMUSG00000033533	protein_coding	Acsm1	ENSMUST00000126367	protein_coding		7	1	119607026	632
ENSMUSG00000083369	unprocessed_pseudogene	Gm15332	ENSMUST00000118386	unprocessed_pseudogene		17	-1	34481119	357
ENSMUSG00000023151	protein_coding	Lrrc69	ENSMUST00000023917	protein_coding	principal1	4	-1	14796060	1242
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000172181	retained_intron		16	-1	16560046	2218
ENSMUSG00000022204	protein_coding	Ngdn	ENSMUST00000022815	protein_coding	principal1	14	1	55015454	1200
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000201448	nonsense_mediated_decay		6	-1	39377672	2669
ENSMUSG00000110873	processed_pseudogene	Gm48652	ENSMUST00000213730	processed_pseudogene		9	1	22401586	243
ENSMUSG00000023151	protein_coding	Lrrc69	ENSMUST00000143565	processed_transcript		4	-1	14756845	625
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000202714	processed_transcript		6	-1	39347986	2071
ENSMUSG00000032458	protein_coding	Copb2	ENSMUST00000035033	protein_coding	principal1	9	1	98563731	3050
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000173397	protein_coding	alternative1	9	1	21424932	3510
ENSMUSG00000022204	protein_coding	Ngdn	ENSMUST00000227833	retained_intron		14	1	55020889	482
ENSMUSG00000022204	protein_coding	Ngdn	ENSMUST00000226658	retained_intron		14	1	55021180	236
ENSMUSG00000023151	protein_coding	Lrrc69	ENSMUST00000108276	protein_coding	principal1	4	-1	14796052	1210
ENSMUSG00000022204	protein_coding	Ngdn	ENSMUST00000226258	retained_intron		14	1	55021422	427
ENSMUSG00000083280	processed_pseudogene	Gm11838	ENSMUST00000121999	processed_pseudogene		4	1	14766335	231
ENSMUSG00000032458	protein_coding	Copb2	ENSMUST00000186657	retained_intron		9	1	98579951	415
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000072362	protein_coding	alternative1	9	1	21424945	3502
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000091309	protein_coding	principal3	3	1	19957054	4029
ENSMUSG00000032458	protein_coding	Copb2	ENSMUST00000187336	retained_intron		9	1	98586845	699
ENSMUSG00000091648	protein_coding	C2cd4d	ENSMUST00000169433	protein_coding	principal1	3	1	94362438	1321
ENSMUSG00000002949	protein_coding	Timm44	ENSMUST00000149827	retained_intron		8	-1	4275885	3041
ENSMUSG00000032458	protein_coding	Copb2	ENSMUST00000189395	retained_intron		9	1	98587346	540
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000162045	retained_intron		16	-1	16560211	3171
ENSMUSG00000032458	protein_coding	Copb2	ENSMUST00000187151	retained_intron		9	1	98587547	500
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000174828	nonsense_mediated_decay		9	1	21424968	608
ENSMUSG00000091648	protein_coding	C2cd4d	ENSMUST00000197526	retained_intron		3	1	94362503	662
ENSMUSG00000111777	processed_pseudogene	Gm47147	ENSMUST00000214600	processed_pseudogene		9	-1	98576766	1459
ENSMUSG00000106838	TEC	1810017P11Rik	ENSMUST00000202592	TEC		5	1	114975456	558
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000162124	retained_intron		16	-1	16560211	2337
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000159542	protein_coding		16	-1	16600549	1488
ENSMUSG00000086140	antisense	Hnf1aos2	ENSMUST00000138108	antisense		5	1	114968823	442
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000200961	nonsense_mediated_decay		6	-1	39372930	2878
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000128615	retained_intron		3	1	19957061	1877
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000159058	retained_intron		16	-1	16559990	3323
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000091087	protein_coding	alternative1	9	1	21424971	3450
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000162414	retained_intron		16	-1	16600039	2672
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000202656	processed_transcript		6	-1	39347378	627
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000162542	retained_intron		16	-1	16527411	1594
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000201208	retained_intron		6	-1	39347350	707
ENSMUSG00000037525	protein_coding	Bcdin3d	ENSMUST00000040313	protein_coding	principal1	15	-1	99474730	1276
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000161624	retained_intron		16	-1	16600345	3726
ENSMUSG00000091471	protein_coding	Gm20538	ENSMUST00000166808	protein_coding	principal1	19	-1	44552831	225
ENSMUSG00000079641	protein_coding	Rpl39	ENSMUST00000115231	protein_coding	principal1	X	-1	37085402	612
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000202400	protein_coding		6	-1	39377659	771
ENSMUSG00000037525	protein_coding	Bcdin3d	ENSMUST00000229827	retained_intron		15	-1	99474708	4628
ENSMUSG00000002688	protein_coding	Prkd1	ENSMUST00000002765	protein_coding	principal1	12	-1	50649098	3653
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000202749	protein_coding		6	-1	39377672	434
ENSMUSG00000048398	protein_coding	Gm5065	ENSMUST00000056639	protein_coding	principal1	7	1	5350537	1441
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000172482	protein_coding	principal4	9	1	21425096	2613
ENSMUSG00000092009	protein_coding	Myh15	ENSMUST00000168680	protein_coding	principal1	16	1	49057486	6340
ENSMUSG00000079641	protein_coding	Rpl39	ENSMUST00000138799	retained_intron		X	-1	37085166	488
ENSMUSG00000115863	processed_pseudogene	Gm49485	ENSMUST00000229161	processed_pseudogene		15	-1	99492224	401
ENSMUSG00000079641	protein_coding	Rpl39	ENSMUST00000131149	retained_intron		X	-1	37085156	512
ENSMUSG00000082624	processed_pseudogene	Gm12535	ENSMUST00000121025	processed_pseudogene		3	1	109907384	484
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000219140	protein_coding	principal1	12	1	59095800	4194
ENSMUSG00000048398	protein_coding	Gm5065	ENSMUST00000207531	protein_coding	principal1	7	1	5351208	807
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000202204	protein_coding		6	-1	39377647	638
ENSMUSG00000022788	protein_coding	Fgd4	ENSMUST00000161188	protein_coding		16	-1	16504222	2214
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000200771	protein_coding		6	-1	39377636	723
ENSMUSG00000083424	processed_pseudogene	Rpl35a-ps4	ENSMUST00000121779	processed_pseudogene		2	-1	108875258	333
ENSMUSG00000114665	lincRNA	Lncbate6	ENSMUST00000224508	lincRNA		13	1	37541357	909
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000200969	protein_coding		6	-1	39377662	422
ENSMUSG00000105391	antisense	Gm43401	ENSMUST00000198829	antisense		3	-1	94402848	394
ENSMUSG00000114665	lincRNA	Lncbate6	ENSMUST00000225065	lincRNA		13	1	37542955	756
ENSMUSG00000103066	TEC	Gm36967	ENSMUST00000193814	TEC		2	1	136679961	266
ENSMUSG00000114665	lincRNA	Lncbate6	ENSMUST00000224218	lincRNA		13	1	37546870	2079
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000202952	protein_coding		6	-1	39377657	312
ENSMUSG00000108806	TEC	Gm44729	ENSMUST00000206759	TEC		7	1	127273264	2052
ENSMUSG00000114665	lincRNA	Lncbate6	ENSMUST00000225390	lincRNA		13	1	37547778	1148
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000202928	processed_transcript		6	-1	39377639	564
ENSMUSG00000049091	protein_coding	Sephs2	ENSMUST00000082428	protein_coding	principal1	7	-1	127274055	2177
ENSMUSG00000112372	lincRNA	Gm48779	ENSMUST00000220240	lincRNA		12	1	50753097	1458
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000003714	protein_coding	alternative2	3	1	19957069	4092
ENSMUSG00000029924	protein_coding	Slc37a3	ENSMUST00000202785	processed_transcript		6	-1	39377618	475
ENSMUSG00000020903	protein_coding	Stx8	ENSMUST00000021285	protein_coding	principal1	11	1	67966193	4394
ENSMUSG00000003051	protein_coding	Elf3	ENSMUST00000003135	protein_coding		1	-1	135258568	2095
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000169194	processed_transcript		9	1	21425243	1591
ENSMUSG00000044505	protein_coding	Lingo4	ENSMUST00000050975	protein_coding	principal1	3	1	94398517	3645
ENSMUSG00000112154	processed_pseudogene	Gm48777	ENSMUST00000220100	processed_pseudogene		12	-1	50895471	373
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000174050	protein_coding		9	1	21425244	2715
ENSMUSG00000020891	protein_coding	Alox8	ENSMUST00000021262	protein_coding	principal2	11	-1	69197843	3226
ENSMUSG00000063684	processed_pseudogene	Hadhb-ps	ENSMUST00000121752	processed_pseudogene		2	1	108948806	1428
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000175912	protein_coding		12	1	59129720	2885
ENSMUSG00000027952	protein_coding	Pmvk	ENSMUST00000029564	protein_coding	principal1	3	1	89459118	1194
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000108328	protein_coding	alternative2	3	1	19957111	4504
ENSMUSG00000114724	lincRNA	Gm47751	ENSMUST00000224689	lincRNA		13	-1	37564972	571
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000172873	processed_transcript		9	1	21457107	373
ENSMUSG00000106058	processed_pseudogene	Gm43013	ENSMUST00000198216	processed_pseudogene		5	1	137309396	247
ENSMUSG00000020903	protein_coding	Stx8	ENSMUST00000021286	protein_coding		11	1	67966469	1638
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000172833	protein_coding		9	1	21476494	744
ENSMUSG00000003051	protein_coding	Elf3	ENSMUST00000185752	protein_coding	principal1	1	-1	135258438	1901
ENSMUSG00000020891	protein_coding	Alox8	ENSMUST00000094078	protein_coding	alternative2	11	-1	69197809	1947
ENSMUSG00000020903	protein_coding	Stx8	ENSMUST00000108675	protein_coding		11	1	67966480	1497
ENSMUSG00000104669	antisense	Gm38411	ENSMUST00000197971	antisense		3	-1	94377245	941
ENSMUSG00000027952	protein_coding	Pmvk	ENSMUST00000107410	protein_coding		3	1	89459331	652
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000131454	retained_intron		3	1	19957219	1635
ENSMUSG00000029328	protein_coding	Hnrnpdl	ENSMUST00000128187	protein_coding	principal1	5	-1	100039222	2752
ENSMUSG00000090460	processed_pseudogene	Gm17511	ENSMUST00000172206	processed_pseudogene		7	-1	127286385	342
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000108325	protein_coding	alternative2	3	1	19957284	3183
ENSMUSG00000027952	protein_coding	Pmvk	ENSMUST00000184515	protein_coding		3	1	89459571	1156
ENSMUSG00000003051	protein_coding	Elf3	ENSMUST00000188895	retained_intron		1	-1	135257649	535
ENSMUSG00000020891	protein_coding	Alox8	ENSMUST00000144787	retained_intron		11	-1	69197811	731
ENSMUSG00000020891	protein_coding	Alox8	ENSMUST00000156157	retained_intron		11	-1	69197384	470
ENSMUSG00000101795	processed_pseudogene	Gm5835	ENSMUST00000185806	processed_pseudogene		1	-1	143094616	1270
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000176892	protein_coding		12	1	59129746	2784
ENSMUSG00000116289	lincRNA	Gm31342	ENSMUST00000230911	lincRNA		15	1	67040058	411
ENSMUSG00000029328	protein_coding	Hnrnpdl	ENSMUST00000153442	protein_coding		5	-1	100038869	2374
ENSMUSG00000002949	protein_coding	Timm44	ENSMUST00000003029	protein_coding	principal1	8	-1	4275913	1790
ENSMUSG00000020903	protein_coding	Stx8	ENSMUST00000129992	processed_transcript		11	1	67966490	552
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000069430	protein_coding		12	1	59129763	2869
ENSMUSG00000085371	processed_pseudogene	Gm3160	ENSMUST00000128343	processed_pseudogene		8	1	14136310	607
ENSMUSG00000020903	protein_coding	Stx8	ENSMUST00000148642	processed_transcript		11	1	67966492	678
ENSMUSG00000002949	protein_coding	Timm44	ENSMUST00000148672	retained_intron		8	-1	4260735	496
ENSMUSG00000020903	protein_coding	Stx8	ENSMUST00000142649	processed_transcript		11	1	67966506	717
ENSMUSG00000082266	processed_pseudogene	Gm12303	ENSMUST00000119506	processed_pseudogene		11	-1	68035710	673
ENSMUSG00000002949	protein_coding	Timm44	ENSMUST00000141195	retained_intron		8	-1	4267045	809
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000177370	protein_coding		12	1	59129765	660
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000172763	retained_intron		9	1	21480319	1772
ENSMUSG00000032459	protein_coding	Mrps22	ENSMUST00000035034	protein_coding	principal1	9	-1	98601660	1197
ENSMUSG00000029328	protein_coding	Hnrnpdl	ENSMUST00000086900	nonsense_mediated_decay		5	-1	100039664	2149
ENSMUSG00000084945	antisense	C030037F17Rik	ENSMUST00000155211	antisense		8	-1	14747427	406
ENSMUSG00000002949	protein_coding	Timm44	ENSMUST00000147831	retained_intron		8	-1	4266982	781
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000173299	retained_intron		9	1	21493943	1255
ENSMUSG00000002949	protein_coding	Timm44	ENSMUST00000135755	retained_intron		8	-1	4267662	888
ENSMUSG00000029328	protein_coding	Hnrnpdl	ENSMUST00000141337	retained_intron		5	-1	100036725	884
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000174243	processed_transcript		9	1	21505107	454
ENSMUSG00000002949	protein_coding	Timm44	ENSMUST00000161143	processed_transcript		8	-1	4275882	875
ENSMUSG00000032459	protein_coding	Mrps22	ENSMUST00000190150	retained_intron		9	-1	98601645	3296
ENSMUSG00000091468	protein_coding	Vmn2r82	ENSMUST00000170596	protein_coding	principal1	10	1	79356520	3752
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000150264	retained_intron		3	1	19969842	3152
ENSMUSG00000017167	protein_coding	Cntnap1	ENSMUST00000103109	protein_coding	principal1	11	1	101176041	5440
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000174803	retained_intron		3	1	19970885	684
ENSMUSG00000033335	protein_coding	Dnm2	ENSMUST00000115404	protein_coding	alternative1	9	1	21424976	3455
ENSMUSG00000091468	protein_coding	Vmn2r82	ENSMUST00000233963	protein_coding		10	1	79356520	2942
ENSMUSG00000102861	antisense	Gm37637	ENSMUST00000195540	antisense		9	1	98590495	1256
ENSMUSG00000091468	protein_coding	Vmn2r82	ENSMUST00000232824	protein_coding		10	1	79356520	2714
ENSMUSG00000002949	protein_coding	Timm44	ENSMUST00000160549	retained_intron		8	-1	4275873	904
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000125994	retained_intron		3	1	19974760	814
ENSMUSG00000091468	protein_coding	Vmn2r82	ENSMUST00000233445	nonsense_mediated_decay		10	1	79356520	5645
ENSMUSG00000002949	protein_coding	Timm44	ENSMUST00000160371	processed_transcript		8	-1	4275849	444
ENSMUSG00000098208	processed_pseudogene	Gm8349	ENSMUST00000182720	processed_pseudogene		3	-1	61462861	1003
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000172605	nonsense_mediated_decay		3	1	19980628	628
ENSMUSG00000091468	protein_coding	Vmn2r82	ENSMUST00000233223	nonsense_mediated_decay		10	1	79356520	4835
ENSMUSG00000091468	protein_coding	Vmn2r82	ENSMUST00000233444	protein_coding		10	1	79356520	3887
ENSMUSG00000102458	TEC	Pisrt1	ENSMUST00000195532	TEC		9	-1	98706266	515
ENSMUSG00000091468	protein_coding	Vmn2r82	ENSMUST00000233447	protein_coding		10	1	79356520	3077
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000131811	retained_intron		3	1	19981428	770
ENSMUSG00000091468	protein_coding	Vmn2r82	ENSMUST00000233694	protein_coding		10	1	79356520	2849
ENSMUSG00000083319	processed_pseudogene	Gm11284	ENSMUST00000121910	processed_pseudogene		13	-1	22165807	1887
ENSMUSG00000102889	TEC	Gm37282	ENSMUST00000191987	TEC		9	-1	98767816	164
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000173848	protein_coding		3	1	19982003	573
ENSMUSG00000103949	TEC	Gm38226	ENSMUST00000192207	TEC		9	1	98771105	521
ENSMUSG00000109159	unprocessed_pseudogene	Gm44657	ENSMUST00000208568	unprocessed_pseudogene		7	-1	18580156	450
ENSMUSG00000104489	processed_pseudogene	Gm9700	ENSMUST00000193786	processed_pseudogene		3	-1	62069794	1617
ENSMUSG00000103322	TEC	Gm37404	ENSMUST00000195726	TEC		3	1	62123207	359
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000172860	protein_coding		3	1	19985612	674
ENSMUSG00000114144	unprocessed_pseudogene	Gm9309	ENSMUST00000223537	unprocessed_pseudogene		12	-1	23736408	546
ENSMUSG00000029328	protein_coding	Hnrnpdl	ENSMUST00000149384	nonsense_mediated_decay		5	-1	100038895	1477
ENSMUSG00000048013	protein_coding	Krt35	ENSMUST00000103127	protein_coding	principal1	11	-1	100096225	1722
ENSMUSG00000102013	lincRNA	E330023G01Rik	ENSMUST00000186387	lincRNA		9	-1	98820087	1483
ENSMUSG00000071362	processed_pseudogene	Gm10330	ENSMUST00000072014	processed_pseudogene		12	-1	23780178	901
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000129135	retained_intron		3	1	19987545	746
ENSMUSG00000029328	protein_coding	Hnrnpdl	ENSMUST00000151323	retained_intron		5	-1	100037123	846
ENSMUSG00000103276	TEC	Gm37917	ENSMUST00000194711	TEC		9	1	98767930	392
ENSMUSG00000029556	protein_coding	Hnf1a	ENSMUST00000031535	protein_coding	principal1	5	-1	114971067	3191
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000173779	protein_coding		3	1	19989152	484
ENSMUSG00000030872	protein_coding	Gga2	ENSMUST00000033160	protein_coding	principal1	7	-1	122021222	4915
ENSMUSG00000003617	protein_coding	Cp	ENSMUST00000108329	protein_coding	alternative2	3	1	19957054	4564
ENSMUSG00000095298	unprocessed_pseudogene	Gm12407	ENSMUST00000180219	unprocessed_pseudogene		4	-1	41793601	324
ENSMUSG00000020902	protein_coding	Ntn1	ENSMUST00000108674	protein_coding	principal1	11	-1	68400823	5874
ENSMUSG00000048013	protein_coding	Krt35	ENSMUST00000173988	retained_intron		11	-1	100096241	2394
ENSMUSG00000000794	protein_coding	Kcnn3	ENSMUST00000000811	protein_coding	principal1	3	1	89520164	2884
ENSMUSG00000091080	protein_coding	Prr23a1	ENSMUST00000170349	protein_coding	principal1	9	1	98842503	883
ENSMUSG00000087544	lincRNA	Gm13923	ENSMUST00000153283	lincRNA		2	1	109022687	288
ENSMUSG00000103502	antisense	9330121J05Rik	ENSMUST00000192267	antisense		3	-1	62340532	3009
ENSMUSG00000020902	protein_coding	Ntn1	ENSMUST00000135141	protein_coding		11	-1	68387012	944
ENSMUSG00000030872	protein_coding	Gga2	ENSMUST00000145277	retained_intron		7	-1	122021180	3086
ENSMUSG00000020902	protein_coding	Ntn1	ENSMUST00000021284	protein_coding	principal1	11	-1	68386826	5738
ENSMUSG00000030872	protein_coding	Gga2	ENSMUST00000124566	nonsense_mediated_decay		7	-1	122021167	4251
ENSMUSG00000063058	protein_coding	Prr23a2	ENSMUST00000071302	protein_coding	principal1	9	1	98856494	881
ENSMUSG00000000794	protein_coding	Kcnn3	ENSMUST00000124584	retained_intron		3	1	89662518	8314
ENSMUSG00000108760	lincRNA	Gm31897	ENSMUST00000205924	lincRNA		7	1	127287729	340
ENSMUSG00000083924	processed_pseudogene	Gm12304	ENSMUST00000120312	processed_pseudogene		11	-1	68095964	385
ENSMUSG00000029556	protein_coding	Hnf1a	ENSMUST00000176911	nonsense_mediated_decay		5	-1	114970844	1687
ENSMUSG00000108760	lincRNA	Gm31897	ENSMUST00000206231	lincRNA		7	1	127288215	604
ENSMUSG00000029556	protein_coding	Hnf1a	ENSMUST00000176550	nonsense_mediated_decay		5	-1	114970844	1256
ENSMUSG00000029556	protein_coding	Hnf1a	ENSMUST00000184027	retained_intron		5	-1	114971094	2390
ENSMUSG00000084993	sense_intronic	Gm12305	ENSMUST00000151817	sense_intronic		11	-1	68270879	407
ENSMUSG00000025204	protein_coding	Ndufb8	ENSMUST00000171415	protein_coding		19	-1	44555426	2142
ENSMUSG00000030872	protein_coding	Gga2	ENSMUST00000144779	retained_intron		7	-1	122002491	2351
ENSMUSG00000030872	protein_coding	Gga2	ENSMUST00000138441	retained_intron		7	-1	121999049	2181
ENSMUSG00000034641	protein_coding	Cd300ld	ENSMUST00000045075	protein_coding	principal1	11	-1	114989922	2645
ENSMUSG00000030872	protein_coding	Gga2	ENSMUST00000131081	retained_intron		7	-1	122021187	620
ENSMUSG00000030534	protein_coding	Vps33b	ENSMUST00000032749	protein_coding	principal1	7	1	80269649	2574
ENSMUSG00000086054	antisense	Hnf1aos1	ENSMUST00000129609	antisense		5	1	114968784	516
ENSMUSG00000026608	protein_coding	Kctd3	ENSMUST00000193143	nonsense_mediated_decay		1	-1	189007828	3934
ENSMUSG00000108511	antisense	Gm44987	ENSMUST00000206578	antisense		7	1	121981761	750
ENSMUSG00000090470	protein_coding	Prr23a3	ENSMUST00000167951	protein_coding	principal1	9	1	98864767	1817
ENSMUSG00000086054	antisense	Hnf1aos1	ENSMUST00000131845	antisense		5	1	114969897	740
ENSMUSG00000087242	antisense	C78197	ENSMUST00000152781	antisense		11	-1	68196153	3417
ENSMUSG00000112357	processed_pseudogene	Gm47864	ENSMUST00000217989	processed_pseudogene		10	-1	111649812	1435
ENSMUSG00000086054	antisense	Hnf1aos1	ENSMUST00000125010	antisense		5	1	114969920	396
ENSMUSG00000035177	protein_coding	Nlrp2	ENSMUST00000045022	protein_coding	principal1	7	-1	5351035	3404
ENSMUSG00000100839	processed_pseudogene	Gm5920	ENSMUST00000187390	processed_pseudogene		9	-1	98873916	853
ENSMUSG00000025204	protein_coding	Ndufb8	ENSMUST00000026222	protein_coding	principal1	19	-1	44555440	680
ENSMUSG00000110788	processed_pseudogene	Gm33700	ENSMUST00000215123	processed_pseudogene		9	1	98888211	697
ENSMUSG00000112321	processed_pseudogene	Gm47866	ENSMUST00000220048	processed_pseudogene		10	-1	111829944	381
ENSMUSG00000073976	lincRNA	1700026J12Rik	ENSMUST00000131357	lincRNA		16	-1	49255772	1155
ENSMUSG00000035177	protein_coding	Nlrp2	ENSMUST00000207685	nonsense_mediated_decay		7	-1	5317541	581
ENSMUSG00000073976	lincRNA	1700026J12Rik	ENSMUST00000098226	lincRNA		16	-1	49255772	1127
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000176752	nonsense_mediated_decay		12	1	59129785	2844
ENSMUSG00000035177	protein_coding	Nlrp2	ENSMUST00000207520	protein_coding		7	-1	5322457	746
ENSMUSG00000074123	protein_coding	7420426K07Rik	ENSMUST00000098460	protein_coding	principal1	9	1	98903119	1504
ENSMUSG00000025204	protein_coding	Ndufb8	ENSMUST00000168083	nonsense_mediated_decay		19	-1	44555419	603
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000176727	nonsense_mediated_decay		12	1	59129810	1222
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000019248	protein_coding	principal1	7	-1	30879028	3974
ENSMUSG00000109155	processed_pseudogene	Gm18757	ENSMUST00000207938	processed_pseudogene		7	1	5304878	3141
ENSMUSG00000108904	processed_pseudogene	Gm45147	ENSMUST00000207410	processed_pseudogene		7	1	5353486	372
ENSMUSG00000058176	processed_pseudogene	Gm5407	ENSMUST00000080694	processed_pseudogene		16	-1	49297898	1248
ENSMUSG00000027367	protein_coding	Stard7	ENSMUST00000131196	processed_transcript		2	1	127270218	679
ENSMUSG00000111411	processed_pseudogene	Gm33778	ENSMUST00000216884	processed_pseudogene		9	1	98918978	704
ENSMUSG00000025204	protein_coding	Ndufb8	ENSMUST00000164543	retained_intron		19	-1	44552880	341
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000177225	protein_coding		12	1	59130377	2872
ENSMUSG00000112137	lincRNA	Gm47865	ENSMUST00000217752	lincRNA		10	-1	111799751	475
ENSMUSG00000101240	processed_pseudogene	Gm28266	ENSMUST00000191410	processed_pseudogene		9	-1	98925612	439
ENSMUSG00000105157	lincRNA	Gm31831	ENSMUST00000198581	lincRNA		5	1	10249092	278
ENSMUSG00000025204	protein_coding	Ndufb8	ENSMUST00000169304	protein_coding		19	-1	44554986	388
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000175877	protein_coding		12	1	59130837	2612
ENSMUSG00000105157	lincRNA	Gm31831	ENSMUST00000196240	lincRNA		5	1	10249142	684
ENSMUSG00000112137	lincRNA	Gm47865	ENSMUST00000218600	lincRNA		10	-1	111799853	851
ENSMUSG00000036291	protein_coding	Ap5m1	ENSMUST00000227431	protein_coding		14	1	49066097	3757
ENSMUSG00000025204	protein_coding	Ndufb8	ENSMUST00000167027	protein_coding		19	-1	44555404	419
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000177460	protein_coding		12	1	59131022	466
ENSMUSG00000112137	lincRNA	Gm47865	ENSMUST00000219530	lincRNA		10	-1	111799834	763
ENSMUSG00000025204	protein_coding	Ndufb8	ENSMUST00000169181	retained_intron		19	-1	44555405	710
ENSMUSG00000102180	TEC	Gm37189	ENSMUST00000192131	TEC		10	1	111810780	298
ENSMUSG00000112802	processed_pseudogene	Gm19005	ENSMUST00000218890	processed_pseudogene		10	-1	111807252	865
ENSMUSG00000020010	protein_coding	Vnn3	ENSMUST00000020190	protein_coding	principal1	10	1	23851462	1811
ENSMUSG00000025204	protein_coding	Ndufb8	ENSMUST00000168474	retained_intron		19	-1	44555426	424
ENSMUSG00000112706	processed_pseudogene	Gm46193	ENSMUST00000219399	processed_pseudogene		10	1	111767778	364
ENSMUSG00000099822	lincRNA	Gm28332	ENSMUST00000191389	lincRNA		Y	-1	36276400	1498
ENSMUSG00000025204	protein_coding	Ndufb8	ENSMUST00000166557	retained_intron		19	-1	44555423	450
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000176464	protein_coding		12	1	59131286	4434
ENSMUSG00000036885	protein_coding	Arhgef26	ENSMUST00000079300	protein_coding	principal1	3	1	62338344	5638
ENSMUSG00000112430	lincRNA	Gm30624	ENSMUST00000220039	lincRNA		10	1	111725184	628
ENSMUSG00000097072	processed_transcript	Foxl2os	ENSMUST00000181706	lincRNA		9	-1	98955299	3095
ENSMUSG00000026608	protein_coding	Kctd3	ENSMUST00000085678	protein_coding	principal1	1	-1	189007840	3706
ENSMUSG00000113691	unprocessed_pseudogene	Gm38699	ENSMUST00000221301	unprocessed_pseudogene		12	-1	23784131	1740
ENSMUSG00000097072	processed_transcript	Foxl2os	ENSMUST00000188093	retained_intron		9	-1	98954284	410
ENSMUSG00000039145	protein_coding	Camk1d	ENSMUST00000044009	protein_coding	principal1	2	-1	5714515	6962
ENSMUSG00000099822	lincRNA	Gm28332	ENSMUST00000185485	lincRNA		Y	-1	36275947	437
ENSMUSG00000099822	lincRNA	Gm28332	ENSMUST00000189521	lincRNA		Y	-1	36275947	621
ENSMUSG00000097072	processed_transcript	Foxl2os	ENSMUST00000189148	retained_intron		9	-1	98954798	672
ENSMUSG00000026608	protein_coding	Kctd3	ENSMUST00000192200	retained_intron		1	-1	188974622	908
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000170992	protein_coding		12	1	59131453	2785
ENSMUSG00000101781	lincRNA	Gm28333	ENSMUST00000186034	lincRNA		Y	1	36308401	2168
ENSMUSG00000097665	antisense	Gm16853	ENSMUST00000181812	antisense		9	-1	21411720	1986
ENSMUSG00000029559	protein_coding	2210016L21Rik	ENSMUST00000031538	protein_coding	principal1	5	1	114942158	2607
ENSMUSG00000089997	protein_coding	1810020O05Rik	ENSMUST00000162547	nonsense_mediated_decay		6	-1	87698448	1637
ENSMUSG00000039145	protein_coding	Camk1d	ENSMUST00000114987	protein_coding		2	-1	5676046	1295
ENSMUSG00000026608	protein_coding	Kctd3	ENSMUST00000195745	retained_intron		1	-1	188974240	495
ENSMUSG00000091817	unprocessed_pseudogene	Gm17091	ENSMUST00000163248	unprocessed_pseudogene		5	1	10537285	357
ENSMUSG00000089997	protein_coding	1810020O05Rik	ENSMUST00000238521	protein_coding	principal1	6	-1	87722801	3678
ENSMUSG00000033533	protein_coding	Acsm1	ENSMUST00000047929	protein_coding	principal1	7	1	119617781	2083
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000207470	protein_coding	alternative2	8	-1	32009540	5846
ENSMUSG00000110915	antisense	Gm36198	ENSMUST00000217490	antisense		9	-1	21369184	416
ENSMUSG00000101271	unprocessed_pseudogene	Gm28334	ENSMUST00000186653	unprocessed_pseudogene		Y	1	36313154	315
ENSMUSG00000071332	transcribed_unprocessed_pseudogene	E230015B07Rik	ENSMUST00000238275	transcribed_unprocessed_pseudogene		6	1	87671983	381
ENSMUSG00000026608	protein_coding	Kctd3	ENSMUST00000195658	protein_coding		1	-1	188978598	725
ENSMUSG00000039145	protein_coding	Camk1d	ENSMUST00000130470	processed_transcript		2	-1	5676400	376
ENSMUSG00000026608	protein_coding	Kctd3	ENSMUST00000195488	retained_intron		1	-1	188973739	1221
ENSMUSG00000039145	protein_coding	Camk1d	ENSMUST00000155927	processed_transcript		2	-1	5714503	653
ENSMUSG00000050397	protein_coding	Foxl2	ENSMUST00000051312	protein_coding	principal1	9	1	98955288	3256
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000176322	protein_coding		12	1	59131467	2649
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000207417	protein_coding	alternative2	8	-1	32009541	3231
ENSMUSG00000033533	protein_coding	Acsm1	ENSMUST00000135683	protein_coding		7	1	119617798	1705
ENSMUSG00000026608	protein_coding	Kctd3	ENSMUST00000192458	protein_coding		1	-1	188976651	630
ENSMUSG00000082013	processed_pseudogene	Gm13216	ENSMUST00000117145	processed_pseudogene		2	1	5603571	591
ENSMUSG00000113765	lincRNA	Gm47549	ENSMUST00000222170	lincRNA		13	1	6269108	776
ENSMUSG00000026608	protein_coding	Kctd3	ENSMUST00000193590	retained_intron		1	-1	188981808	688
ENSMUSG00000030254	protein_coding	Rad18	ENSMUST00000077088	protein_coding	principal3	6	-1	112696686	2577
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000209107	protein_coding	alternative2	8	-1	32884254	3202
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000175803	retained_intron		12	1	59131481	644
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000177162	protein_coding		12	1	59131502	2728
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000238791	protein_coding	alternative2	8	-1	32884797	2493
ENSMUSG00000036885	protein_coding	Arhgef26	ENSMUST00000163008	processed_transcript		3	1	62338999	2837
ENSMUSG00000071332	transcribed_unprocessed_pseudogene	E230015B07Rik	ENSMUST00000160577	processed_transcript		6	1	87672382	839
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000176336	nonsense_mediated_decay		12	1	59136109	2291
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000156177	protein_coding		3	-1	110143004	4652
ENSMUSG00000109093	antisense	Gm19950	ENSMUST00000208167	antisense		7	-1	119643469	4196
ENSMUSG00000096820	protein_coding	Gm21425	ENSMUST00000195626	protein_coding	principal1	Y	1	13161968	1345
ENSMUSG00000036885	protein_coding	Arhgef26	ENSMUST00000161493	retained_intron		3	1	62340390	901
ENSMUSG00000071332	transcribed_unprocessed_pseudogene	E230015B07Rik	ENSMUST00000095740	processed_transcript		6	1	87672410	706
ENSMUSG00000096820	protein_coding	Gm21425	ENSMUST00000180318	protein_coding	principal1	Y	1	13163582	699
ENSMUSG00000026608	protein_coding	Kctd3	ENSMUST00000195787	retained_intron		1	-1	189007841	1967
ENSMUSG00000030254	protein_coding	Rad18	ENSMUST00000113182	protein_coding	alternative2	6	-1	112696604	2220
ENSMUSG00000036885	protein_coding	Arhgef26	ENSMUST00000159746	processed_transcript		3	1	62341101	647
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000176617	nonsense_mediated_decay		12	1	59149511	1935
ENSMUSG00000036885	protein_coding	Arhgef26	ENSMUST00000161057	protein_coding		3	1	62419668	771
ENSMUSG00000030254	protein_coding	Rad18	ENSMUST00000113180	protein_coding	alternative2	6	-1	112696611	2136
ENSMUSG00000026608	protein_coding	Kctd3	ENSMUST00000193273	retained_intron		1	-1	188997716	2207
ENSMUSG00000114097	lincRNA	Gm35615	ENSMUST00000221255	lincRNA		13	-1	6294714	719
ENSMUSG00000036885	protein_coding	Arhgef26	ENSMUST00000192138	retained_intron		3	1	62427180	2832
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000175837	nonsense_mediated_decay		12	1	59162890	796
ENSMUSG00000071332	transcribed_unprocessed_pseudogene	E230015B07Rik	ENSMUST00000159884	processed_transcript		6	1	87672430	2822
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000133268	protein_coding		3	-1	110144011	5587
ENSMUSG00000109093	antisense	Gm19950	ENSMUST00000207110	antisense		7	-1	119620375	1560
ENSMUSG00000029559	protein_coding	2210016L21Rik	ENSMUST00000147743	retained_intron		5	1	114942204	884
ENSMUSG00000101540	lincRNA	Gm28465	ENSMUST00000190368	lincRNA		13	1	6395716	1243
ENSMUSG00000101540	lincRNA	Gm28465	ENSMUST00000220779	lincRNA		13	1	6396172	1701
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000175659	retained_intron		12	1	59166790	3815
ENSMUSG00000098096	lincRNA	Gm26969	ENSMUST00000183203	lincRNA		14	-1	62204352	648
ENSMUSG00000029559	protein_coding	2210016L21Rik	ENSMUST00000131427	nonsense_mediated_decay		5	1	114942210	923
ENSMUSG00000070796	protein_coding	Psg21	ENSMUST00000094793	protein_coding	principal1	7	-1	18656722	2074
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000177222	retained_intron		12	1	59168859	758
ENSMUSG00000029559	protein_coding	2210016L21Rik	ENSMUST00000140090	retained_intron		5	1	114942231	368
ENSMUSG00000109093	antisense	Gm19950	ENSMUST00000207060	antisense		7	-1	119620297	498
ENSMUSG00000103474	lincRNA	Gm37252	ENSMUST00000195063	lincRNA		Y	-1	13213395	1499
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000176223	retained_intron		12	1	59168988	206
ENSMUSG00000070796	protein_coding	Psg21	ENSMUST00000182128	protein_coding		7	-1	18656722	2066
ENSMUSG00000109093	antisense	Gm19950	ENSMUST00000207364	antisense		7	-1	119642408	464
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000128219	nonsense_mediated_decay		3	-1	110143475	3977
ENSMUSG00000109093	antisense	Gm19950	ENSMUST00000208211	antisense		7	-1	119642360	282
ENSMUSG00000029559	protein_coding	2210016L21Rik	ENSMUST00000131771	nonsense_mediated_decay		5	1	114945805	470
ENSMUSG00000114195	TEC	2900042G08Rik	ENSMUST00000221776	TEC		13	1	6530595	650
ENSMUSG00000021000	protein_coding	Mia2	ENSMUST00000175685	retained_intron		12	1	59179513	881
ENSMUSG00000036291	protein_coding	Ap5m1	ENSMUST00000037473	protein_coding	principal1	14	1	49066495	6321
ENSMUSG00000113282	processed_pseudogene	Gm20368	ENSMUST00000220716	processed_pseudogene		12	-1	112205153	301
ENSMUSG00000070796	protein_coding	Psg21	ENSMUST00000182228	retained_intron		7	-1	18656725	1536
ENSMUSG00000030254	protein_coding	Rad18	ENSMUST00000068487	protein_coding	alternative2	6	-1	112696670	2577
ENSMUSG00000070796	protein_coding	Psg21	ENSMUST00000182933	processed_transcript		7	-1	18656699	789
ENSMUSG00000093743	unprocessed_pseudogene	Vmn1r-ps17	ENSMUST00000175797	unprocessed_pseudogene		6	-1	58116630	894
ENSMUSG00000058030	protein_coding	Vmn1r237	ENSMUST00000237155	protein_coding	principal1	17	1	21311865	1756
ENSMUSG00000058030	protein_coding	Vmn1r237	ENSMUST00000237711	retained_intron		17	1	21311865	2970
ENSMUSG00000030254	protein_coding	Rad18	ENSMUST00000142079	protein_coding		6	-1	112675776	724
ENSMUSG00000093708	processed_pseudogene	Gm20718	ENSMUST00000176058	processed_pseudogene		6	1	58135885	259
ENSMUSG00000058030	protein_coding	Vmn1r237	ENSMUST00000077301	protein_coding	principal1	17	1	21313963	947
ENSMUSG00000036291	protein_coding	Ap5m1	ENSMUST00000228238	protein_coding		14	1	49066496	3514
ENSMUSG00000107521	lincRNA	Gm43994	ENSMUST00000203809	lincRNA		6	1	58192321	227
ENSMUSG00000019027	protein_coding	Dnah1	ENSMUST00000048603	protein_coding	principal1	14	-1	31323896	12872
ENSMUSG00000021932	protein_coding	Rnaseh2b	ENSMUST00000166879	protein_coding		14	1	62292589	362
ENSMUSG00000093731	unprocessed_pseudogene	Vmn1r-ps18	ENSMUST00000176901	unprocessed_pseudogene		6	1	58205685	876
ENSMUSG00000054905	protein_coding	Stfa3	ENSMUST00000068182	protein_coding	principal1	16	-1	36455392	412
ENSMUSG00000024727	protein_coding	Trpm6	ENSMUST00000040489	protein_coding	principal1	19	1	18749983	6509
ENSMUSG00000071428	protein_coding	Vmn1r27	ENSMUST00000228530	protein_coding	principal2	6	-1	58218821	3115
ENSMUSG00000071428	protein_coding	Vmn1r27	ENSMUST00000226666	protein_coding	alternative2	6	-1	58218821	2969
ENSMUSG00000018334	protein_coding	Ksr1	ENSMUST00000018478	protein_coding	principal1	11	-1	79146407	5495
ENSMUSG00000074359	protein_coding	Psg23	ENSMUST00000057810	protein_coding	principal1	7	-1	18616501	2179
ENSMUSG00000071428	protein_coding	Vmn1r27	ENSMUST00000095862	protein_coding	principal2	6	-1	58216017	912
ENSMUSG00000036291	protein_coding	Ap5m1	ENSMUST00000227410	nonsense_mediated_decay		14	1	49066531	2544
ENSMUSG00000079693	unprocessed_pseudogene	Vmn1r-ps150	ENSMUST00000176659	unprocessed_pseudogene		17	-1	21323766	736
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000190646	nonsense_mediated_decay		7	-1	30880034	3603
ENSMUSG00000116768	processed_pseudogene	Gm18269	ENSMUST00000231877	processed_pseudogene		17	1	21366847	1656
ENSMUSG00000018334	protein_coding	Ksr1	ENSMUST00000226282	protein_coding		11	-1	79059836	5260
ENSMUSG00000108992	processed_pseudogene	Gm19092	ENSMUST00000209036	processed_pseudogene		7	-1	18627990	969
ENSMUSG00000036291	protein_coding	Ap5m1	ENSMUST00000227608	nonsense_mediated_decay		14	1	49066542	2362
ENSMUSG00000116917	TEC	Gm49653	ENSMUST00000231458	TEC		16	-1	36473841	1226
ENSMUSG00000018334	protein_coding	Ksr1	ENSMUST00000209031	protein_coding		11	-1	79020410	491
ENSMUSG00000109053	unprocessed_pseudogene	Gm44656	ENSMUST00000208428	unprocessed_pseudogene		7	-1	18629153	490
ENSMUSG00000028150	protein_coding	Rorc	ENSMUST00000029795	protein_coding	principal3	3	1	94372794	2136
ENSMUSG00000036291	protein_coding	Ap5m1	ENSMUST00000227991	protein_coding		14	1	49073993	477
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000108125	protein_coding	principal1	7	-1	30880065	3633
ENSMUSG00000018334	protein_coding	Ksr1	ENSMUST00000108264	protein_coding		11	-1	79146407	2748
ENSMUSG00000028779	protein_coding	Pef1	ENSMUST00000118199	protein_coding	principal1	4	1	130102558	1915
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000186154	protein_coding	principal1	7	-1	30880269	3819
ENSMUSG00000018334	protein_coding	Ksr1	ENSMUST00000208969	protein_coding		11	-1	79074486	1298
ENSMUSG00000028729	protein_coding	Ebna1bp2	ENSMUST00000030501	protein_coding	principal1	4	1	118620799	2960
ENSMUSG00000024727	protein_coding	Trpm6	ENSMUST00000236199	nonsense_mediated_decay		19	1	18749991	6290
ENSMUSG00000028150	protein_coding	Rorc	ENSMUST00000197040	protein_coding	alternative2	3	1	94377432	2576
ENSMUSG00000116633	processed_pseudogene	Gm18519	ENSMUST00000232365	processed_pseudogene		17	-1	21395117	1040
ENSMUSG00000083348	transcribed_unprocessed_pseudogene	Vmn1r-ps99	ENSMUST00000120067	transcribed_unprocessed_pseudogene		13	-1	22175594	766
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000189718	protein_coding	principal1	7	-1	30878449	3672
ENSMUSG00000036291	protein_coding	Ap5m1	ENSMUST00000227066	protein_coding		14	1	49081005	936
ENSMUSG00000030254	protein_coding	Rad18	ENSMUST00000132590	processed_transcript		6	-1	112696648	3535
ENSMUSG00000095916	protein_coding	Vmn1r191	ENSMUST00000235950	nonsense_mediated_decay		13	-1	22183969	5400
ENSMUSG00000019027	protein_coding	Dnah1	ENSMUST00000228429	processed_transcript		14	-1	31269511	2897
ENSMUSG00000030254	protein_coding	Rad18	ENSMUST00000156063	nonsense_mediated_decay		6	-1	112696633	1496
ENSMUSG00000036291	protein_coding	Ap5m1	ENSMUST00000226695	protein_coding		14	1	49083857	616
ENSMUSG00000115311	antisense	Gm35823	ENSMUST00000228755	antisense		14	1	31268757	1558
ENSMUSG00000095916	protein_coding	Vmn1r191	ENSMUST00000237107	protein_coding	principal1	13	-1	22183969	7551
ENSMUSG00000115311	antisense	Gm35823	ENSMUST00000228927	antisense		14	1	31269241	1201
ENSMUSG00000018334	protein_coding	Ksr1	ENSMUST00000141409	protein_coding		11	-1	79059875	715
ENSMUSG00000111803	lincRNA	Gm47564	ENSMUST00000216569	lincRNA		9	1	14204083	403
ENSMUSG00000095916	protein_coding	Vmn1r191	ENSMUST00000072369	protein_coding	principal1	13	-1	22179582	897
ENSMUSG00000030254	protein_coding	Rad18	ENSMUST00000135092	retained_intron		6	-1	112696644	2004
ENSMUSG00000111695	lincRNA	Gm47565	ENSMUST00000216064	lincRNA		9	-1	14250939	386
ENSMUSG00000028779	protein_coding	Pef1	ENSMUST00000030563	protein_coding	principal1	4	1	130107556	1551
ENSMUSG00000028150	protein_coding	Rorc	ENSMUST00000198793	retained_intron		3	1	94377460	2592
ENSMUSG00000111097	lincRNA	Gm34069	ENSMUST00000214060	lincRNA		9	-1	14263803	2441
ENSMUSG00000099492	processed_pseudogene	Gm5525	ENSMUST00000190438	processed_pseudogene		1	-1	29485915	1312
ENSMUSG00000082962	unprocessed_pseudogene	Gm10601	ENSMUST00000120436	unprocessed_pseudogene		4	1	41809083	1422
ENSMUSG00000028729	protein_coding	Ebna1bp2	ENSMUST00000130219	processed_transcript		4	1	118620848	805
ENSMUSG00000103080	TEC	Gm38123	ENSMUST00000194990	TEC		12	-1	112350067	2779
ENSMUSG00000018334	protein_coding	Ksr1	ENSMUST00000129463	protein_coding		11	-1	79057627	432
ENSMUSG00000041926	protein_coding	Rnpep	ENSMUST00000077340	protein_coding	principal1	1	-1	135284084	2288
ENSMUSG00000102641	IG_V_pseudogene	Ighv1-3	ENSMUST00000192764	IG_V_pseudogene		12	-1	114481916	302
ENSMUSG00000028729	protein_coding	Ebna1bp2	ENSMUST00000149837	processed_transcript		4	1	118620850	729
ENSMUSG00000028150	protein_coding	Rorc	ENSMUST00000200009	protein_coding		3	1	94377516	1543
ENSMUSG00000041926	protein_coding	Rnpep	ENSMUST00000074357	protein_coding		1	-1	135284084	2171
ENSMUSG00000113120	lincRNA	E330035G20Rik	ENSMUST00000223323	lincRNA		12	-1	112405794	3578
ENSMUSG00000028729	protein_coding	Ebna1bp2	ENSMUST00000147373	protein_coding		4	1	118621160	602
ENSMUSG00000024727	protein_coding	Trpm6	ENSMUST00000237623	retained_intron		19	1	18758625	3548
ENSMUSG00000024727	protein_coding	Trpm6	ENSMUST00000237020	protein_coding		19	1	18840637	1618
ENSMUSG00000095442	IG_V_gene	Ighv1-4	ENSMUST00000103493	IG_V_gene	principal1	12	-1	114487569	351
ENSMUSG00000041926	protein_coding	Rnpep	ENSMUST00000141234	retained_intron		1	-1	135267402	747
ENSMUSG00000113120	lincRNA	E330035G20Rik	ENSMUST00000221094	lincRNA		12	-1	112405812	3002
ENSMUSG00000114718	processed_pseudogene	Gm47753	ENSMUST00000223615	processed_pseudogene		13	1	37582271	294
ENSMUSG00000103875	IG_V_pseudogene	Ighv10-2	ENSMUST00000195182	IG_V_pseudogene		12	-1	114496300	298
ENSMUSG00000028729	protein_coding	Ebna1bp2	ENSMUST00000126458	processed_transcript		4	1	118621226	788
ENSMUSG00000041926	protein_coding	Rnpep	ENSMUST00000130069	processed_transcript		1	-1	135271638	475
ENSMUSG00000021932	protein_coding	Rnaseh2b	ENSMUST00000022499	protein_coding	principal1	14	1	62332068	1494
ENSMUSG00000073420	transcribed_unprocessed_pseudogene	Btnl5-ps	ENSMUST00000097346	transcribed_unprocessed_pseudogene		17	-1	34496004	1751
ENSMUSG00000030534	protein_coding	Vps33b	ENSMUST00000150585	nonsense_mediated_decay		7	1	80269679	2554
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000138953	protein_coding		3	-1	110135508	1443
ENSMUSG00000073420	transcribed_unprocessed_pseudogene	Btnl5-ps	ENSMUST00000173832	processed_transcript		17	-1	34494212	411
ENSMUSG00000080925	processed_pseudogene	Gm13682	ENSMUST00000117524	processed_pseudogene		2	1	83394180	702
ENSMUSG00000083171	processed_pseudogene	Gm12321	ENSMUST00000121485	processed_pseudogene		11	-1	71057969	804
ENSMUSG00000041926	protein_coding	Rnpep	ENSMUST00000188053	processed_transcript		1	-1	135274707	574
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000190617	protein_coding	principal1	7	-1	30880334	3230
ENSMUSG00000114784	lincRNA	Gm47754	ENSMUST00000223604	lincRNA		13	1	37581077	389
ENSMUSG00000041926	protein_coding	Rnpep	ENSMUST00000141092	retained_intron		1	-1	135272933	785
ENSMUSG00000073420	transcribed_unprocessed_pseudogene	Btnl5-ps	ENSMUST00000173333	processed_transcript		17	-1	34497429	461
ENSMUSG00000082098	processed_pseudogene	Gm15377	ENSMUST00000119594	processed_pseudogene		11	1	71069423	246
ENSMUSG00000062743	protein_coding	Zfp677	ENSMUST00000056107	protein_coding	principal1	17	1	21383748	2909
ENSMUSG00000041926	protein_coding	Rnpep	ENSMUST00000190632	retained_intron		1	-1	135277418	1577
ENSMUSG00000041926	protein_coding	Rnpep	ENSMUST00000152169	retained_intron		1	-1	135279112	535
ENSMUSG00000041926	protein_coding	Rnpep	ENSMUST00000189615	retained_intron		1	-1	135279915	2275
ENSMUSG00000021932	protein_coding	Rnaseh2b	ENSMUST00000169728	nonsense_mediated_decay		14	1	62332125	628
ENSMUSG00000110484	processed_pseudogene	Gm45712	ENSMUST00000212417	processed_pseudogene		8	1	111318037	335
ENSMUSG00000062743	protein_coding	Zfp677	ENSMUST00000162659	protein_coding	principal1	17	1	21383748	2917
ENSMUSG00000097680	antisense	Gm26642	ENSMUST00000180981	antisense		1	1	135248561	2782
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000187989	nonsense_mediated_decay		7	-1	30880279	3223
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000214289	protein_coding		7	-1	30878086	1990
ENSMUSG00000112685	lincRNA	Gm40421	ENSMUST00000218991	lincRNA		12	-1	51004873	658
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000190455	nonsense_mediated_decay		7	-1	30873419	537
ENSMUSG00000021932	protein_coding	Rnaseh2b	ENSMUST00000156608	retained_intron		14	1	62347299	4983
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000072596	protein_coding	principal3	3	-1	110135508	1620
ENSMUSG00000030534	protein_coding	Vps33b	ENSMUST00000128254	retained_intron		7	1	80269734	1690
ENSMUSG00000108134	processed_pseudogene	Gm9560	ENSMUST00000205012	processed_pseudogene		10	1	130140042	1201
ENSMUSG00000095865	processed_pseudogene	Gm13237	ENSMUST00000122151	processed_pseudogene		4	-1	146565087	635
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000138344	protein_coding	alternative1	3	-1	110135508	1452
ENSMUSG00000030534	protein_coding	Vps33b	ENSMUST00000135053	nonsense_mediated_decay		7	1	80269740	2413
ENSMUSG00000030534	protein_coding	Vps33b	ENSMUST00000145594	processed_transcript		7	1	80274294	420
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000131027	protein_coding		3	-1	110135508	1485
ENSMUSG00000030534	protein_coding	Vps33b	ENSMUST00000205864	protein_coding		7	1	80290008	397
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000191116	retained_intron		3	-1	109833259	2302
ENSMUSG00000058084	protein_coding	Olfr825	ENSMUST00000216434	processed_transcript		10	-1	130166735	2690
ENSMUSG00000058084	protein_coding	Olfr825	ENSMUST00000216530	protein_coding	principal1	10	-1	130166766	3502
ENSMUSG00000030534	protein_coding	Vps33b	ENSMUST00000135470	retained_intron		7	1	80290056	639
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000189335	retained_intron		3	-1	110135468	2725
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000186354	processed_transcript		7	-1	30879224	466
ENSMUSG00000048281	protein_coding	Dleu7	ENSMUST00000063169	protein_coding	principal1	14	-1	62292963	1314
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000188157	protein_coding		7	-1	30880261	489
ENSMUSG00000116771	antisense	Gm49691	ENSMUST00000232563	antisense		17	-1	21450267	1156
ENSMUSG00000058084	protein_coding	Olfr825	ENSMUST00000076814	protein_coding	principal1	10	-1	130163422	1159
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000187585	retained_intron		7	-1	30878102	370
ENSMUSG00000112688	processed_pseudogene	Gm48514	ENSMUST00000218167	processed_pseudogene		10	1	130163679	283
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000106571	protein_coding		3	-1	110135508	1446
ENSMUSG00000048281	protein_coding	Dleu7	ENSMUST00000225120	nonsense_mediated_decay		14	-1	62293047	1535
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208617	protein_coding		8	-1	32009471	2807
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000106575	protein_coding	alternative1	3	-1	110135508	1620
ENSMUSG00000019775	protein_coding	Rgs17	ENSMUST00000131996	protein_coding	principal1	10	-1	5922386	8107
ENSMUSG00000021711	protein_coding	Trappc13	ENSMUST00000144060	protein_coding	alternative1	13	-1	104178469	3538
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000190170	processed_transcript		7	-1	30880278	420
ENSMUSG00000047495	protein_coding	Dlgap2	ENSMUST00000152652	protein_coding	principal4	8	1	14095865	3842
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000106570	protein_coding		3	-1	110135508	1386
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208205	protein_coding	alternative2	8	-1	32009504	2698
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000186333	processed_transcript		7	-1	30880278	367
ENSMUSG00000059857	protein_coding	Ntng1	ENSMUST00000051253	protein_coding		3	-1	110144011	327
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000190753	protein_coding		7	-1	30880268	347
ENSMUSG00000082629	processed_pseudogene	Gm5639	ENSMUST00000122305	processed_pseudogene		X	1	73297593	2403
ENSMUSG00000086179	lincRNA	Gm14317	ENSMUST00000151754	lincRNA		2	1	164550530	1464
ENSMUSG00000030577	protein_coding	Cd22	ENSMUST00000187436	processed_transcript		7	-1	30880342	358
ENSMUSG00000081253	processed_pseudogene	Gm8501	ENSMUST00000117684	processed_pseudogene		X	1	73313203	432
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000004097	protein_coding	principal3	5	-1	136567445	12862
ENSMUSG00000047495	protein_coding	Dlgap2	ENSMUST00000133298	protein_coding	alternative2	8	1	14095875	4503
ENSMUSG00000019775	protein_coding	Rgs17	ENSMUST00000117676	protein_coding	principal1	10	-1	5922366	1651
ENSMUSG00000109368	protein_coding	Gm45015	ENSMUST00000207943	protein_coding	principal1	X	-1	73336840	1364
ENSMUSG00000101029	antisense	Gm29439	ENSMUST00000189996	antisense		7	1	30872733	509
ENSMUSG00000047495	protein_coding	Dlgap2	ENSMUST00000150247	protein_coding	alternative2	8	1	14179667	3138
ENSMUSG00000019775	protein_coding	Rgs17	ENSMUST00000019909	protein_coding		10	-1	5922366	831
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000073884	protein_coding	principal2	8	-1	31918877	3049
ENSMUSG00000047084	protein_coding	Ngrn	ENSMUST00000117989	protein_coding	principal1	7	1	80261215	1317
ENSMUSG00000085401	processed_pseudogene	Slc39a1-ps	ENSMUST00000120862	processed_pseudogene		2	1	30159398	969
ENSMUSG00000047495	protein_coding	Dlgap2	ENSMUST00000141155	processed_transcript		8	1	14381734	1156
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208819	protein_coding		8	-1	32009182	2246
ENSMUSG00000047495	protein_coding	Dlgap2	ENSMUST00000136000	processed_transcript		8	1	14381948	400
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000175975	protein_coding	alternative2	5	-1	136567246	10945
ENSMUSG00000019775	protein_coding	Rgs17	ENSMUST00000064225	protein_coding		10	-1	5922400	8191
ENSMUSG00000047084	protein_coding	Ngrn	ENSMUST00000138005	retained_intron		7	1	80261220	1709
ENSMUSG00000027367	protein_coding	Stard7	ENSMUST00000110375	protein_coding	principal1	2	1	127270229	3116
ENSMUSG00000042684	protein_coding	Npl	ENSMUST00000041874	protein_coding	principal1	1	-1	153550045	1735
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000176486	protein_coding		5	-1	136373348	4890
ENSMUSG00000042684	protein_coding	Npl	ENSMUST00000187747	retained_intron		1	-1	153549711	1290
ENSMUSG00000051984	protein_coding	Sec31b	ENSMUST00000063632	protein_coding	principal1	19	-1	44545864	3939
ENSMUSG00000083020	unprocessed_pseudogene	Gm15331	ENSMUST00000120225	unprocessed_pseudogene		17	-1	34501491	385
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000176778	protein_coding	alternative2	5	-1	136566351	5520
ENSMUSG00000021711	protein_coding	Trappc13	ENSMUST00000141557	protein_coding	alternative1	13	-1	104178425	3502
ENSMUSG00000027367	protein_coding	Stard7	ENSMUST00000125049	protein_coding		2	1	127270704	2869
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208488	protein_coding	alternative2	8	-1	32009451	2403
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000238842	protein_coding	alternative1	8	-1	31918568	2520
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000239067	protein_coding	alternative2	8	-1	32009109	1812
ENSMUSG00000030322	protein_coding	Mbd4	ENSMUST00000032469	protein_coding	principal1	6	-1	115853371	3614
ENSMUSG00000027367	protein_coding	Stard7	ENSMUST00000110374	protein_coding		2	1	127270734	1530
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000176172	protein_coding	alternative2	5	-1	136565432	4882
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000238816	protein_coding		8	-1	32009121	1491
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000239151	protein_coding		8	-1	32009109	1302
ENSMUSG00000062421	protein_coding	Arf2	ENSMUST00000057921	protein_coding	principal1	11	1	103966739	2242
ENSMUSG00000051984	protein_coding	Sec31b	ENSMUST00000111985	protein_coding		19	-1	44545847	3548
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208335	protein_coding		8	-1	31917650	900
ENSMUSG00000021469	protein_coding	Msx2	ENSMUST00000021922	protein_coding	principal1	13	-1	53473074	2453
ENSMUSG00000103468	protein_coding	Gm21440	ENSMUST00000192749	protein_coding	principal1	Y	1	13252391	1344
ENSMUSG00000051984	protein_coding	Sec31b	ENSMUST00000165758	nonsense_mediated_decay		19	-1	44520593	503
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208598	protein_coding		8	-1	32009153	1778
ENSMUSG00000047495	protein_coding	Dlgap2	ENSMUST00000141214	retained_intron		8	1	14381996	2949
ENSMUSG00000021469	protein_coding	Msx2	ENSMUST00000188606	retained_intron		13	-1	53473074	1569
ENSMUSG00000021711	protein_coding	Trappc13	ENSMUST00000022224	protein_coding	principal4	13	-1	104178423	2342
ENSMUSG00000027367	protein_coding	Stard7	ENSMUST00000123152	retained_intron		2	1	127284234	773
ENSMUSG00000062421	protein_coding	Arf2	ENSMUST00000063347	protein_coding	principal1	11	1	103966871	2660
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000163906	processed_transcript		5	-1	136302521	1885
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208497	protein_coding		8	-1	31918391	2098
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000176423	protein_coding		5	-1	136363295	805
ENSMUSG00000117680	processed_pseudogene	Gm50148	ENSMUST00000236388	processed_pseudogene		18	1	66394297	391
ENSMUSG00000030322	protein_coding	Mbd4	ENSMUST00000133830	processed_transcript		6	-1	115848705	2064
ENSMUSG00000093903	protein_coding	Gm21454	ENSMUST00000192204	protein_coding	principal1	Y	1	13376362	1343
ENSMUSG00000047495	protein_coding	Dlgap2	ENSMUST00000137130	processed_transcript		8	1	14742753	414
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000207678	protein_coding		8	-1	31950057	1418
ENSMUSG00000118228	TEC	Gm50153	ENSMUST00000236577	TEC		18	-1	66406910	129
ENSMUSG00000030322	protein_coding	Mbd4	ENSMUST00000203643	protein_coding		6	-1	115848966	669
ENSMUSG00000093903	protein_coding	Gm21454	ENSMUST00000178599	protein_coding	principal1	Y	1	13252442	1285
ENSMUSG00000021711	protein_coding	Trappc13	ENSMUST00000142745	retained_intron		13	-1	104178459	909
ENSMUSG00000062421	protein_coding	Arf2	ENSMUST00000153092	retained_intron		11	1	103972953	316
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000176501	retained_intron		5	-1	136567252	1616
ENSMUSG00000047495	protein_coding	Dlgap2	ENSMUST00000129119	processed_transcript		8	1	14777773	2271
ENSMUSG00000062421	protein_coding	Arf2	ENSMUST00000154089	protein_coding		11	1	103979589	334
ENSMUSG00000047495	protein_coding	Dlgap2	ENSMUST00000043279	protein_coding	alternative2	8	1	14179667	3580
ENSMUSG00000030322	protein_coding	Mbd4	ENSMUST00000147282	nonsense_mediated_decay		6	-1	115853365	2924
ENSMUSG00000103176	lincRNA	Gm37147	ENSMUST00000193756	lincRNA		Y	-1	13310334	1498
ENSMUSG00000023882	protein_coding	Zfp54	ENSMUST00000165230	protein_coding	principal1	17	1	21423227	2832
ENSMUSG00000059316	protein_coding	Slc27a4	ENSMUST00000080065	protein_coding	principal1	2	1	29802634	4054
ENSMUSG00000030322	protein_coding	Mbd4	ENSMUST00000122816	protein_coding		6	-1	115853288	2415
ENSMUSG00000029705	protein_coding	Cux1	ENSMUST00000177305	retained_intron		5	-1	136567490	3290
ENSMUSG00000027367	protein_coding	Stard7	ENSMUST00000144687	retained_intron		2	1	127290075	1358
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000238958	processed_transcript		8	-1	31950035	519
ENSMUSG00000104369	TEC	Gm38082	ENSMUST00000192800	TEC		5	-1	136536477	6882
ENSMUSG00000041544	protein_coding	Disp3	ENSMUST00000047720	protein_coding	principal1	4	-1	148287965	5282
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000238909	processed_transcript		8	-1	31886586	539
ENSMUSG00000027367	protein_coding	Stard7	ENSMUST00000135616	processed_transcript		2	1	127292109	459
ENSMUSG00000006276	protein_coding	Eps15l1	ENSMUST00000163643	protein_coding	principal1	8	-1	72421460	3129
ENSMUSG00000059316	protein_coding	Slc27a4	ENSMUST00000136444	processed_transcript		2	1	29806998	722
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208355	processed_transcript		8	-1	31849375	285
ENSMUSG00000023882	protein_coding	Zfp54	ENSMUST00000007884	protein_coding	principal1	17	1	21423233	2300
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208931	protein_coding		8	-1	31917666	407
ENSMUSG00000093522	unprocessed_pseudogene	Vmn1r-ps19	ENSMUST00000177008	unprocessed_pseudogene		6	-1	58257548	926
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000209022	protein_coding		8	-1	32884254	1418
ENSMUSG00000102415	TEC	A430110C17Rik	ENSMUST00000195666	TEC		5	-1	136350231	4348
ENSMUSG00000021711	protein_coding	Trappc13	ENSMUST00000179891	protein_coding	alternative1	13	-1	104178407	1689
ENSMUSG00000104522	lincRNA	Gm38159	ENSMUST00000194145	lincRNA		Y	-1	13338145	621
ENSMUSG00000104522	lincRNA	Gm38159	ENSMUST00000193656	lincRNA		Y	-1	13338145	437
ENSMUSG00000041544	protein_coding	Disp3	ENSMUST00000143851	retained_intron		4	-1	148260751	595
ENSMUSG00000006276	protein_coding	Eps15l1	ENSMUST00000212121	protein_coding		8	-1	72421451	2686
ENSMUSG00000027367	protein_coding	Stard7	ENSMUST00000154549	processed_transcript		2	1	127292111	400
ENSMUSG00000102334	processed_pseudogene	Gm18865	ENSMUST00000193011	processed_pseudogene		3	-1	43391937	1171
ENSMUSG00000107429	antisense	Gm44206	ENSMUST00000203044	antisense		6	1	115824499	592
ENSMUSG00000104303	TEC	Gm36976	ENSMUST00000192632	TEC		3	1	43547173	1110
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000239080	protein_coding		8	-1	32009109	1338
ENSMUSG00000063236	protein_coding	1110038F14Rik	ENSMUST00000071792	protein_coding	principal2	15	1	76948506	1043
ENSMUSG00000107429	antisense	Gm44206	ENSMUST00000203620	antisense		6	1	115836131	358
ENSMUSG00000117579	lincRNA	Gm50023	ENSMUST00000234374	lincRNA		18	1	4399328	384
ENSMUSG00000057147	protein_coding	Dph6	ENSMUST00000102542	protein_coding	principal1	2	-1	114654964	2734
ENSMUSG00000041544	protein_coding	Disp3	ENSMUST00000129734	processed_transcript		4	-1	148261231	415
ENSMUSG00000023882	protein_coding	Zfp54	ENSMUST00000167749	protein_coding		17	1	21423258	822
ENSMUSG00000117640	processed_pseudogene	Gm7411	ENSMUST00000234230	processed_pseudogene		18	1	4484469	1033
ENSMUSG00000104083	processed_pseudogene	Gm29739	ENSMUST00000191760	processed_pseudogene		3	-1	43764764	529
ENSMUSG00000046909	protein_coding	Tefm	ENSMUST00000136996	protein_coding		11	-1	80139909	810
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000238826	protein_coding		8	-1	32009541	1625
ENSMUSG00000063236	protein_coding	1110038F14Rik	ENSMUST00000230274	protein_coding	alternative2	15	1	76948522	1111
ENSMUSG00000063236	protein_coding	1110038F14Rik	ENSMUST00000231058	retained_intron		15	1	76948529	1646
ENSMUSG00000102792	processed_pseudogene	Gm32175	ENSMUST00000193641	processed_pseudogene		3	-1	43927947	346
ENSMUSG00000103148	TEC	Gm37746	ENSMUST00000193249	TEC		3	1	43955721	198
ENSMUSG00000021539	protein_coding	Lect2	ENSMUST00000062806	protein_coding	principal1	13	-1	56548502	837
ENSMUSG00000057147	protein_coding	Dph6	ENSMUST00000028640	protein_coding		2	-1	114654953	2632
ENSMUSG00000030051	protein_coding	Aplf	ENSMUST00000065997	protein_coding		6	-1	87672147	3132
ENSMUSG00000063236	protein_coding	1110038F14Rik	ENSMUST00000229229	protein_coding	alternative2	15	1	76948749	1131
ENSMUSG00000083038	processed_pseudogene	Gm13233	ENSMUST00000118760	processed_pseudogene		4	1	146580629	1443
ENSMUSG00000112533	lincRNA	Gm20758	ENSMUST00000220339	lincRNA		10	-1	111874376	2171
ENSMUSG00000104013	processed_pseudogene	Gm37365	ENSMUST00000193109	processed_pseudogene		3	-1	44493903	409
ENSMUSG00000091453	unprocessed_pseudogene	Gm6541	ENSMUST00000165542	unprocessed_pseudogene		14	1	44701858	561
ENSMUSG00000096366	processed_pseudogene	Gm13240	ENSMUST00000120042	processed_pseudogene		4	1	146604212	565
ENSMUSG00000112628	processed_pseudogene	Gm47880	ENSMUST00000217819	processed_pseudogene		10	1	111889014	428
ENSMUSG00000093949	unprocessed_pseudogene	Gm21754	ENSMUST00000177550	unprocessed_pseudogene		14	1	44687491	479
ENSMUSG00000057147	protein_coding	Dph6	ENSMUST00000055144	protein_coding		2	-1	114654887	2476
ENSMUSG00000006276	protein_coding	Eps15l1	ENSMUST00000212257	processed_transcript		8	-1	72374314	1029
ENSMUSG00000095460	unprocessed_pseudogene	Vmn2r-ps16	ENSMUST00000178737	unprocessed_pseudogene		4	1	146605105	377
ENSMUSG00000021539	protein_coding	Lect2	ENSMUST00000225183	protein_coding		13	-1	56548409	823
ENSMUSG00000114352	lincRNA	4931407E12Rik	ENSMUST00000224374	lincRNA		14	-1	21889766	1164
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000238812	protein_coding		8	-1	31918885	2011
ENSMUSG00000104232	TEC	Gm37590	ENSMUST00000193294	TEC		14	1	21932095	603
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000238879	protein_coding		8	-1	32884457	1904
ENSMUSG00000024795	protein_coding	Kif20b	ENSMUST00000087341	protein_coding	principal2	19	1	34922361	5564
ENSMUSG00000030321	protein_coding	Efcab12	ENSMUST00000124531	nonsense_mediated_decay		6	-1	115838412	2495
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000239055	processed_transcript		8	-1	31886586	1010
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000207584	protein_coding		8	-1	31918399	1592
ENSMUSG00000029755	protein_coding	Dlx5	ENSMUST00000142635	protein_coding		6	-1	6882068	1324
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000040506	protein_coding	principal1	18	-1	34506823	3344
ENSMUSG00000079265	protein_coding	Gm8257	ENSMUST00000169583	protein_coding	principal5	14	-1	44657357	1749
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000239051	protein_coding		8	-1	32883862	1004
ENSMUSG00000046909	protein_coding	Tefm	ENSMUST00000050207	protein_coding	principal1	11	-1	80142175	1309
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000239032	protein_coding		8	-1	32009106	631
ENSMUSG00000030321	protein_coding	Efcab12	ENSMUST00000184428	protein_coding	principal1	6	-1	115838412	2384
ENSMUSG00000030051	protein_coding	Aplf	ENSMUST00000203209	nonsense_mediated_decay		6	-1	87672064	1587
ENSMUSG00000079265	protein_coding	Gm8257	ENSMUST00000111860	protein_coding	alternative2	14	-1	44706456	1590
ENSMUSG00000079265	protein_coding	Gm8257	ENSMUST00000227585	processed_transcript		14	-1	44706451	586
ENSMUSG00000024795	protein_coding	Kif20b	ENSMUST00000223907	protein_coding	alternative2	19	1	34922392	5423
ENSMUSG00000060044	protein_coding	Tmem26	ENSMUST00000219392	nonsense_mediated_decay		10	1	68723646	669
ENSMUSG00000079265	protein_coding	Gm8257	ENSMUST00000179215	protein_coding		14	-1	44657226	489
ENSMUSG00000061244	protein_coding	Exoc5	ENSMUST00000162175	protein_coding	principal1	14	-1	49066653	12699
ENSMUSG00000030321	protein_coding	Efcab12	ENSMUST00000032468	protein_coding	principal1	6	-1	115838412	2551
ENSMUSG00000024795	protein_coding	Kif20b	ENSMUST00000223776	protein_coding		19	1	34922434	740
ENSMUSG00000006276	protein_coding	Eps15l1	ENSMUST00000212950	retained_intron		8	-1	72421438	2620
ENSMUSG00000032239	protein_coding	Rp9	ENSMUST00000215715	protein_coding	alternative2	9	-1	22468358	1499
ENSMUSG00000046909	protein_coding	Tefm	ENSMUST00000131601	protein_coding		11	-1	80142143	894
ENSMUSG00000061244	protein_coding	Exoc5	ENSMUST00000161504	protein_coding		14	-1	49066396	2582
ENSMUSG00000099701	processed_pseudogene	Gm19136	ENSMUST00000190706	processed_pseudogene		1	-1	150024256	2067
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208820	retained_intron		8	-1	32009491	5224
ENSMUSG00000081647	processed_pseudogene	Gm13022	ENSMUST00000121181	processed_pseudogene		4	-1	132802254	285
ENSMUSG00000057147	protein_coding	Dph6	ENSMUST00000150447	retained_intron		2	-1	114654964	2590
ENSMUSG00000024795	protein_coding	Kif20b	ENSMUST00000225408	nonsense_mediated_decay		19	1	34929729	547
ENSMUSG00000006276	protein_coding	Eps15l1	ENSMUST00000212590	protein_coding		8	-1	72421455	3376
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000238824	processed_transcript		8	-1	32292913	612
ENSMUSG00000062991	protein_coding	Nrg1	ENSMUST00000208206	retained_intron		8	-1	31918357	2086
ENSMUSG00000024795	protein_coding	Kif20b	ENSMUST00000224603	retained_intron		19	1	34929772	687
ENSMUSG00000061244	protein_coding	Exoc5	ENSMUST00000160833	retained_intron		14	-1	49019792	749
ENSMUSG00000006276	protein_coding	Eps15l1	ENSMUST00000211977	retained_intron		8	-1	72421441	1641
ENSMUSG00000039081	protein_coding	Zfp503	ENSMUST00000043409	protein_coding	principal1	14	-1	21989601	4216
ENSMUSG00000061244	protein_coding	Exoc5	ENSMUST00000159651	retained_intron		14	-1	49023270	880
ENSMUSG00000110558	TEC	Gm45779	ENSMUST00000212189	TEC		8	-1	72421472	4064
ENSMUSG00000080805	processed_pseudogene	Gm11219	ENSMUST00000118565	processed_pseudogene		4	1	65011230	358
ENSMUSG00000057147	protein_coding	Dph6	ENSMUST00000138975	retained_intron		2	-1	114654905	3010
ENSMUSG00000032239	protein_coding	Rp9	ENSMUST00000034763	protein_coding	principal2	9	-1	22468348	1134
ENSMUSG00000103709	processed_pseudogene	Nras-ps2	ENSMUST00000195269	processed_pseudogene		1	-1	7189919	178
ENSMUSG00000061244	protein_coding	Exoc5	ENSMUST00000160453	retained_intron		14	-1	49023534	559
ENSMUSG00000030051	protein_coding	Aplf	ENSMUST00000032130	protein_coding	principal1	6	-1	87672193	1889
ENSMUSG00000097028	processed_transcript	Ptgs2os	ENSMUST00000181915	antisense		1	-1	150099817	2937
ENSMUSG00000057147	protein_coding	Dph6	ENSMUST00000138106	processed_transcript		2	-1	114545891	556
ENSMUSG00000061244	protein_coding	Exoc5	ENSMUST00000160723	retained_intron		14	-1	49035394	4429
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000236786	nonsense_mediated_decay		18	-1	34506813	4731
ENSMUSG00000032239	protein_coding	Rp9	ENSMUST00000216973	protein_coding	alternative2	9	-1	22469743	796
ENSMUSG00000046764	processed_transcript	A530053G22Rik	ENSMUST00000205153	lincRNA		6	-1	60403707	1448
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000235364	nonsense_mediated_decay		18	-1	34451437	510
ENSMUSG00000030051	protein_coding	Aplf	ENSMUST00000203776	retained_intron		6	-1	87672129	3588
ENSMUSG00000084785	processed_transcript	Gm13972	ENSMUST00000153726	processed_transcript		2	1	114654425	3164
ENSMUSG00000061244	protein_coding	Exoc5	ENSMUST00000160386	nonsense_mediated_decay		14	-1	49048818	694
ENSMUSG00000097028	processed_transcript	Ptgs2os	ENSMUST00000181460	retained_intron		1	-1	150099963	1783
ENSMUSG00000032239	protein_coding	Rp9	ENSMUST00000217370	retained_intron		9	-1	22468170	525
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000237302	processed_transcript		18	-1	34454783	598
ENSMUSG00000032239	protein_coding	Rp9	ENSMUST00000214005	retained_intron		9	-1	22468178	1358
ENSMUSG00000107593	antisense	Gm44097	ENSMUST00000204112	antisense		6	1	87657754	563
ENSMUSG00000024795	protein_coding	Kif20b	ENSMUST00000224728	nonsense_mediated_decay		19	1	34935686	4352
ENSMUSG00000101337	protein_coding	Dnah7c	ENSMUST00000189749	protein_coding	principal1	1	1	46425592	12207
ENSMUSG00000115624	TEC	Gm49204	ENSMUST00000226647	TEC		14	-1	49028569	4640
ENSMUSG00000039168	protein_coding	Dap	ENSMUST00000044524	protein_coding	principal1	15	1	31224314	1555
ENSMUSG00000024795	protein_coding	Kif20b	ENSMUST00000223937	nonsense_mediated_decay		19	1	34952892	788
ENSMUSG00000060044	protein_coding	Tmem26	ENSMUST00000080995	protein_coding	principal1	10	1	68723746	5048
ENSMUSG00000020309	protein_coding	Chac2	ENSMUST00000101394	protein_coding		11	-1	30986350	1315
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000238047	protein_coding		18	-1	34465211	919
ENSMUSG00000033157	protein_coding	Abhd10	ENSMUST00000066983	protein_coding	principal1	16	-1	45742955	2848
ENSMUSG00000024795	protein_coding	Kif20b	ENSMUST00000225151	protein_coding		19	1	34970081	573
ENSMUSG00000024795	protein_coding	Kif20b	ENSMUST00000224381	retained_intron		19	1	34972729	675
ENSMUSG00000092219	lincRNA	Gm20443	ENSMUST00000173840	lincRNA		17	-1	35739806	735
ENSMUSG00000039168	protein_coding	Dap	ENSMUST00000186109	protein_coding		15	1	31224455	279
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000235529	processed_transcript		18	-1	34464546	463
ENSMUSG00000024795	protein_coding	Kif20b	ENSMUST00000225625	retained_intron		19	1	34975147	543
ENSMUSG00000060044	protein_coding	Tmem26	ENSMUST00000218918	nonsense_mediated_decay		10	1	68723824	1603
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000237676	retained_intron		18	-1	34463207	525
ENSMUSG00000020309	protein_coding	Chac2	ENSMUST00000020553	protein_coding	principal1	11	-1	30986334	1018
ENSMUSG00000104838	processed_pseudogene	Gm43710	ENSMUST00000199583	processed_pseudogene		6	1	68909406	452
ENSMUSG00000101337	protein_coding	Dnah7c	ENSMUST00000189339	processed_transcript		1	1	46639148	672
ENSMUSG00000029755	protein_coding	Dlx5	ENSMUST00000052609	protein_coding	principal1	6	-1	6882085	1423
ENSMUSG00000101337	protein_coding	Dnah7c	ENSMUST00000191499	processed_transcript		1	1	46640231	390
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000238059	nonsense_mediated_decay		18	-1	34494194	736
ENSMUSG00000039168	protein_coding	Dap	ENSMUST00000186547	protein_coding		15	1	31224560	535
ENSMUSG00000101337	protein_coding	Dnah7c	ENSMUST00000187094	processed_transcript		1	1	46654005	831
ENSMUSG00000076536	IG_V_gene	Igkv4-86	ENSMUST00000200454	IG_V_gene	principal5	6	-1	68910973	378
ENSMUSG00000033157	protein_coding	Abhd10	ENSMUST00000128348	nonsense_mediated_decay		16	-1	45742902	827
ENSMUSG00000039168	protein_coding	Dap	ENSMUST00000186425	protein_coding		15	1	31225196	597
ENSMUSG00000046764	processed_transcript	A530053G22Rik	ENSMUST00000060147	lincRNA		6	-1	60403698	1526
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000237051	retained_intron		18	-1	34473597	658
ENSMUSG00000101337	protein_coding	Dnah7c	ENSMUST00000178395	protein_coding		1	1	46608961	612
ENSMUSG00000029755	protein_coding	Dlx5	ENSMUST00000204014	retained_intron		6	-1	6882082	1391
ENSMUSG00000012519	protein_coding	Mlkl	ENSMUST00000056157	protein_coding	alternative2	8	-1	111338177	2003
ENSMUSG00000076536	IG_V_gene	Igkv4-86	ENSMUST00000103337	IG_V_gene	alternative2	6	-1	68910938	340
ENSMUSG00000046764	processed_transcript	A530053G22Rik	ENSMUST00000204370	lincRNA		6	-1	60403671	612
ENSMUSG00000033157	protein_coding	Abhd10	ENSMUST00000138517	processed_transcript		16	-1	45742885	771
ENSMUSG00000039168	protein_coding	Dap	ENSMUST00000185618	protein_coding		15	1	31268336	388
ENSMUSG00000112179	processed_pseudogene	Gm3213	ENSMUST00000219296	processed_pseudogene		10	1	6367676	441
ENSMUSG00000091923	protein_coding	Gm8267	ENSMUST00000165003	protein_coding	alternative2	14	-1	44724987	1751
ENSMUSG00000043999	protein_coding	Gpr75	ENSMUST00000109430	protein_coding	principal1	11	1	30885358	2926
ENSMUSG00000046764	processed_transcript	A530053G22Rik	ENSMUST00000204579	lincRNA		6	-1	60403680	536
ENSMUSG00000033157	protein_coding	Abhd10	ENSMUST00000143731	processed_transcript		16	-1	45742907	484
ENSMUSG00000046764	processed_transcript	A530053G22Rik	ENSMUST00000203367	retained_intron		6	-1	60403707	2633
ENSMUSG00000091923	protein_coding	Gm8267	ENSMUST00000169062	protein_coding	principal2	14	-1	44724987	1240
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000237576	processed_transcript		18	-1	34497538	621
ENSMUSG00000084146	processed_pseudogene	Gm12104	ENSMUST00000120359	processed_pseudogene		11	-1	30907920	979
ENSMUSG00000033157	protein_coding	Abhd10	ENSMUST00000155741	processed_transcript		16	-1	45742900	451
ENSMUSG00000038816	protein_coding	Ctnnal1	ENSMUST00000045142	protein_coding	principal1	4	-1	56865188	3664
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000235499	processed_transcript		18	-1	34506804	680
ENSMUSG00000091923	protein_coding	Gm8267	ENSMUST00000226900	protein_coding	alternative2	14	-1	44750340	1592
ENSMUSG00000000320	protein_coding	Alox12	ENSMUST00000000329	protein_coding	principal1	11	-1	70255353	3001
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000238068	retained_intron		18	-1	34497903	794
ENSMUSG00000086237	antisense	Gm15591	ENSMUST00000138539	antisense		16	1	45736503	627
ENSMUSG00000012519	protein_coding	Mlkl	ENSMUST00000120432	protein_coding	principal3	8	-1	111338177	1976
ENSMUSG00000106992	TEC	Gm43167	ENSMUST00000202001	TEC		5	-1	74431105	1606
ENSMUSG00000036501	protein_coding	Fam13b	ENSMUST00000236598	retained_intron		18	-1	34506831	3757
ENSMUSG00000104051	TEC	Gm38128	ENSMUST00000192085	TEC		3	1	44659902	3250
ENSMUSG00000091923	protein_coding	Gm8267	ENSMUST00000228619	retained_intron		14	-1	44724987	451
ENSMUSG00000107009	TEC	6720475M21Rik	ENSMUST00000201755	TEC		5	-1	74369915	2753
ENSMUSG00000000320	protein_coding	Alox12	ENSMUST00000108574	protein_coding		11	-1	70255341	2314
ENSMUSG00000012519	protein_coding	Mlkl	ENSMUST00000135710	processed_transcript		8	-1	111316119	679
ENSMUSG00000114250	unprocessed_pseudogene	Gm49142	ENSMUST00000224861	unprocessed_pseudogene		14	1	44753446	186
ENSMUSG00000040771	protein_coding	Oard1	ENSMUST00000167180	protein_coding	principal1	17	1	48410014	1324
ENSMUSG00000103353	processed_pseudogene	Gm37597	ENSMUST00000191853	processed_pseudogene		3	-1	44718513	382
ENSMUSG00000115321	lincRNA	Gm34060	ENSMUST00000228539	lincRNA		14	1	44750440	757
ENSMUSG00000100470	unprocessed_pseudogene	Gm29479	ENSMUST00000190352	unprocessed_pseudogene		7	-1	47391070	455
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000105962	protein_coding		4	-1	132329489	961
ENSMUSG00000103082	TEC	Gm38124	ENSMUST00000191710	TEC		3	-1	45272567	2581
ENSMUSG00000014503	protein_coding	Pkd2l2	ENSMUST00000236131	processed_transcript		18	1	34408489	1373
ENSMUSG00000118548	processed_pseudogene	AC125120.1	ENSMUST00000239107	processed_pseudogene		1	1	29813154	1285
ENSMUSG00000110557	transcribed_unprocessed_pseudogene	Gm5159	ENSMUST00000212733	transcribed_unprocessed_pseudogene		8	-1	104708204	1644
ENSMUSG00000012519	protein_coding	Mlkl	ENSMUST00000145862	protein_coding		8	-1	111337793	593
ENSMUSG00000014503	protein_coding	Pkd2l2	ENSMUST00000235732	processed_transcript		18	1	34408489	1811
ENSMUSG00000020092	protein_coding	Pald1	ENSMUST00000020289	protein_coding	principal1	10	-1	61383530	4282
ENSMUSG00000103477	TEC	5930409G06Rik	ENSMUST00000192347	TEC		3	-1	45274967	1544
ENSMUSG00000069830	protein_coding	Nlrp1a	ENSMUST00000048514	protein_coding	alternative2	11	-1	71142366	3903
ENSMUSG00000040771	protein_coding	Oard1	ENSMUST00000046651	protein_coding	principal1	17	1	48410080	1135
ENSMUSG00000110557	transcribed_unprocessed_pseudogene	Gm5159	ENSMUST00000212774	processed_transcript		8	-1	104708257	658
ENSMUSG00000063838	protein_coding	Cdc42ep5	ENSMUST00000076831	protein_coding	principal1	7	-1	4164860	1025
ENSMUSG00000020092	protein_coding	Pald1	ENSMUST00000219240	retained_intron		10	-1	61342327	603
ENSMUSG00000036411	protein_coding	9530077C05Rik	ENSMUST00000058868	protein_coding	principal1	9	1	22411513	2223
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000012580	protein_coding	principal1	3	-1	20035315	4016
ENSMUSG00000023011	protein_coding	Faim2	ENSMUST00000023750	protein_coding	principal1	15	-1	99528165	4661
ENSMUSG00000020092	protein_coding	Pald1	ENSMUST00000219132	processed_transcript		10	-1	61381993	496
ENSMUSG00000040771	protein_coding	Oard1	ENSMUST00000233426	protein_coding		17	1	48410092	590
ENSMUSG00000098022	protein_coding	Zfp82	ENSMUST00000183025	retained_intron		7	-1	30057764	3276
ENSMUSG00000093973	protein_coding	Mrgpra2a	ENSMUST00000159004	protein_coding	principal1	7	-1	47452139	1240
ENSMUSG00000023892	protein_coding	Zfp51	ENSMUST00000039577	protein_coding	principal1	17	1	21450374	2574
ENSMUSG00000110497	processed_transcript	9230110F11Rik	ENSMUST00000212403	TEC		8	1	104711249	1468
ENSMUSG00000112875	TEC	Gm48074	ENSMUST00000219196	TEC		10	-1	61381048	1635
ENSMUSG00000063838	protein_coding	Cdc42ep5	ENSMUST00000143825	protein_coding		7	-1	4164539	421
ENSMUSG00000110497	processed_transcript	9230110F11Rik	ENSMUST00000212907	lincRNA		8	1	104711282	191
ENSMUSG00000098022	protein_coding	Zfp82	ENSMUST00000182483	retained_intron		7	-1	30061307	3516
ENSMUSG00000063838	protein_coding	Cdc42ep5	ENSMUST00000140410	protein_coding		7	-1	4164442	362
ENSMUSG00000112256	TEC	Gm48077	ENSMUST00000219025	TEC		10	1	61359666	1742
ENSMUSG00000118580	unprocessed_pseudogene	AC156564.1	ENSMUST00000239254	unprocessed_pseudogene		8	-1	104720965	244
ENSMUSG00000047828	processed_transcript	A730018C14Rik	ENSMUST00000221848	processed_transcript		12	-1	112423198	1752
ENSMUSG00000117521	lincRNA	Gm50024	ENSMUST00000234706	lincRNA		18	1	4590763	1696
ENSMUSG00000117665	processed_pseudogene	Gm20294	ENSMUST00000236609	processed_pseudogene		18	1	66417328	476
ENSMUSG00000026374	protein_coding	Tsn	ENSMUST00000027623	protein_coding	principal1	1	-1	118311416	7063
ENSMUSG00000036411	protein_coding	9530077C05Rik	ENSMUST00000213598	processed_transcript		9	1	22411548	3881
ENSMUSG00000097356	lincRNA	Gm26774	ENSMUST00000181534	lincRNA		6	-1	6955900	2401
ENSMUSG00000047828	processed_transcript	A730018C14Rik	ENSMUST00000050754	lincRNA		12	-1	112423212	2253
ENSMUSG00000112312	processed_pseudogene	Gm47755	ENSMUST00000217959	processed_pseudogene		10	1	6422698	187
ENSMUSG00000036411	protein_coding	9530077C05Rik	ENSMUST00000214436	protein_coding		9	1	22411639	695
ENSMUSG00000082782	processed_pseudogene	Gm5319	ENSMUST00000118965	processed_pseudogene		7	-1	4177235	873
ENSMUSG00000049882	protein_coding	Vcpkmt	ENSMUST00000058639	protein_coding	principal1	12	-1	69583110	1109
ENSMUSG00000047828	processed_transcript	A730018C14Rik	ENSMUST00000220752	processed_transcript		12	-1	112414927	445
ENSMUSG00000038816	protein_coding	Ctnnal1	ENSMUST00000134754	processed_transcript		4	-1	56865168	1956
ENSMUSG00000023011	protein_coding	Faim2	ENSMUST00000230837	retained_intron		15	-1	99527681	11480
ENSMUSG00000111902	processed_pseudogene	Gm4921	ENSMUST00000219804	processed_pseudogene		10	-1	6526874	992
ENSMUSG00000036411	protein_coding	9530077C05Rik	ENSMUST00000213133	retained_intron		9	1	22430265	1382
ENSMUSG00000108641	processed_pseudogene	Gm44807	ENSMUST00000206115	processed_pseudogene		7	1	4177367	154
ENSMUSG00000057409	protein_coding	Zfp53	ENSMUST00000233158	protein_coding	principal1	17	1	21488998	3065
ENSMUSG00000026374	protein_coding	Tsn	ENSMUST00000186608	retained_intron		1	-1	118310237	2997
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000171171	protein_coding	principal1	17	-1	31512751	4154
ENSMUSG00000038816	protein_coding	Ctnnal1	ENSMUST00000127908	processed_transcript		4	-1	56839667	3795
ENSMUSG00000040694	protein_coding	Apobec2	ENSMUST00000046549	protein_coding	principal1	17	-1	48432930	1420
ENSMUSG00000069830	protein_coding	Nlrp1a	ENSMUST00000108518	protein_coding	principal2	11	-1	71144704	3767
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000030730	protein_coding	principal1	4	-1	132329538	1130
ENSMUSG00000057409	protein_coding	Zfp53	ENSMUST00000076664	protein_coding	principal1	17	1	21491256	2058
ENSMUSG00000038816	protein_coding	Ctnnal1	ENSMUST00000132764	processed_transcript		4	-1	56846092	297
ENSMUSG00000023011	protein_coding	Faim2	ENSMUST00000231171	protein_coding		15	-1	99527712	4168
ENSMUSG00000092618	protein_coding	Btnl6	ENSMUST00000173164	unprocessed_pseudogene		17	-1	34517352	1751
ENSMUSG00000026374	protein_coding	Tsn	ENSMUST00000188512	retained_intron		1	-1	118309986	656
ENSMUSG00000040694	protein_coding	Apobec2	ENSMUST00000233707	processed_transcript		17	-1	48432618	317
ENSMUSG00000021374	protein_coding	Nup153	ENSMUST00000021803	protein_coding	principal1	13	-1	46727940	6109
ENSMUSG00000038816	protein_coding	Ctnnal1	ENSMUST00000107612	protein_coding		4	-1	56865154	850
ENSMUSG00000023011	protein_coding	Faim2	ENSMUST00000231211	retained_intron		15	-1	99510677	881
ENSMUSG00000106967	antisense	Gm42477	ENSMUST00000202427	antisense		16	1	5008370	469
ENSMUSG00000115936	lincRNA	4833415N18Rik	ENSMUST00000229695	lincRNA		16	1	11778429	1168
ENSMUSG00000023011	protein_coding	Faim2	ENSMUST00000229214	processed_transcript		15	-1	99510867	605
ENSMUSG00000038816	protein_coding	Ctnnal1	ENSMUST00000154511	processed_transcript		4	-1	56838584	740
ENSMUSG00000117104	antisense	Gm49893	ENSMUST00000233838	antisense		17	1	48417280	471
ENSMUSG00000026374	protein_coding	Tsn	ENSMUST00000189768	processed_transcript		1	-1	118311462	617
ENSMUSG00000085292	antisense	Gm12853	ENSMUST00000134971	antisense		4	-1	118636062	442
ENSMUSG00000038816	protein_coding	Ctnnal1	ENSMUST00000136308	processed_transcript		4	-1	56829853	622
ENSMUSG00000021374	protein_coding	Nup153	ENSMUST00000182156	retained_intron		13	-1	46681952	597
ENSMUSG00000049882	protein_coding	Vcpkmt	ENSMUST00000238220	nonsense_mediated_decay		12	-1	69583017	1018
ENSMUSG00000038816	protein_coding	Ctnnal1	ENSMUST00000134915	processed_transcript		4	-1	56817656	565
ENSMUSG00000097828	processed_transcript	6430562O15Rik	ENSMUST00000180491	antisense		13	-1	99412621	2488
ENSMUSG00000037852	protein_coding	Cpe	ENSMUST00000048967	protein_coding	principal1	8	-1	64693054	2117
ENSMUSG00000023011	protein_coding	Faim2	ENSMUST00000230603	retained_intron		15	-1	99527682	1318
ENSMUSG00000021374	protein_coding	Nup153	ENSMUST00000182914	retained_intron		13	-1	46684014	557
ENSMUSG00000026374	protein_coding	Tsn	ENSMUST00000188882	retained_intron		1	-1	118311236	465
ENSMUSG00000097828	processed_transcript	6430562O15Rik	ENSMUST00000180808	antisense		13	-1	99412876	3997
ENSMUSG00000097828	processed_transcript	6430562O15Rik	ENSMUST00000225937	retained_intron		13	-1	99412664	3157
ENSMUSG00000042505	protein_coding	Sdhaf3	ENSMUST00000040826	protein_coding	principal1	6	1	6956004	4323
ENSMUSG00000038816	protein_coding	Ctnnal1	ENSMUST00000131231	processed_transcript		4	-1	56814319	654
ENSMUSG00000049882	protein_coding	Vcpkmt	ENSMUST00000238784	nonsense_mediated_decay		12	-1	69583110	875
ENSMUSG00000092618	protein_coding	Btnl6	ENSMUST00000075483	protein_coding	principal1	17	-1	34517352	1620
ENSMUSG00000026374	protein_coding	Tsn	ENSMUST00000186163	retained_intron		1	-1	118311739	1059
ENSMUSG00000020709	protein_coding	Adap2	ENSMUST00000021050	protein_coding	principal1	11	1	80154105	1785
ENSMUSG00000021374	protein_coding	Nup153	ENSMUST00000224203	protein_coding		13	-1	46694105	909
ENSMUSG00000049882	protein_coding	Vcpkmt	ENSMUST00000238319	retained_intron		12	-1	69583015	3340
ENSMUSG00000037852	protein_coding	Cpe	ENSMUST00000210783	processed_transcript		8	-1	64596677	550
ENSMUSG00000114404	lincRNA	Gm40915	ENSMUST00000224987	lincRNA		13	-1	37627571	1565
ENSMUSG00000072492	transcribed_processed_pseudogene	Gm10364	ENSMUST00000076633	processed_transcript		14	1	55038462	1328
ENSMUSG00000114404	lincRNA	Gm40915	ENSMUST00000225437	lincRNA		13	-1	37627603	858
ENSMUSG00000099858	processed_pseudogene	Gm6652	ENSMUST00000186414	processed_pseudogene		1	-1	153620673	1070
ENSMUSG00000049882	protein_coding	Vcpkmt	ENSMUST00000238563	retained_intron		12	-1	69582935	475
ENSMUSG00000022809	protein_coding	Nr1i2	ENSMUST00000023504	protein_coding	principal1	16	-1	38294824	2553
ENSMUSG00000043698	protein_coding	Olfr62	ENSMUST00000213189	protein_coding	principal1	4	1	118658952	2570
ENSMUSG00000083441	unprocessed_pseudogene	Gm15329	ENSMUST00000121408	unprocessed_pseudogene		17	-1	34521904	155
ENSMUSG00000042505	protein_coding	Sdhaf3	ENSMUST00000123848	processed_transcript		6	1	6956007	966
ENSMUSG00000063245	protein_coding	Zfp993	ENSMUST00000130825	protein_coding	principal5	4	1	146610961	1275
ENSMUSG00000043698	protein_coding	Olfr62	ENSMUST00000217013	protein_coding	principal1	4	1	118664393	2654
ENSMUSG00000021374	protein_coding	Nup153	ENSMUST00000224186	retained_intron		13	-1	46696848	554
ENSMUSG00000079543	IG_V_gene	Igkv13-85	ENSMUST00000114212	IG_V_gene	principal1	6	-1	68930734	347
ENSMUSG00000072492	transcribed_processed_pseudogene	Gm10364	ENSMUST00000153034	transcribed_processed_pseudogene		14	1	55041772	1001
ENSMUSG00000063245	protein_coding	Zfp993	ENSMUST00000070932	protein_coding	alternative2	4	1	146654927	387
ENSMUSG00000020709	protein_coding	Adap2	ENSMUST00000134118	nonsense_mediated_decay		11	1	80154116	601
ENSMUSG00000037852	protein_coding	Cpe	ENSMUST00000210680	processed_transcript		8	-1	64620485	590
ENSMUSG00000103160	TEC	C130012C08Rik	ENSMUST00000194287	TEC		14	1	21992436	3665
ENSMUSG00000021374	protein_coding	Nup153	ENSMUST00000225894	protein_coding		13	-1	46707817	610
ENSMUSG00000043698	protein_coding	Olfr62	ENSMUST00000102666	protein_coding	principal1	4	1	118665519	949
ENSMUSG00000037852	protein_coding	Cpe	ENSMUST00000211312	processed_transcript		8	-1	64621997	688
ENSMUSG00000061728	unprocessed_pseudogene	Btnl7-ps	ENSMUST00000023469	unprocessed_pseudogene		17	-1	34547651	1763
ENSMUSG00000021374	protein_coding	Nup153	ENSMUST00000182358	retained_intron		13	-1	46702130	711
ENSMUSG00000076538	IG_V_gene	Igkv13-84	ENSMUST00000103339	IG_V_gene	principal1	6	1	68939602	347
ENSMUSG00000086521	unprocessed_pseudogene	Olfr1343-ps1	ENSMUST00000117414	unprocessed_pseudogene		4	-1	118673522	914
ENSMUSG00000021374	protein_coding	Nup153	ENSMUST00000224062	protein_coding		13	-1	46717267	766
ENSMUSG00000086507	antisense	Adap2os	ENSMUST00000140556	antisense		11	-1	80177629	984
ENSMUSG00000114604	lincRNA	2010203P06Rik	ENSMUST00000224345	lincRNA		13	1	56595537	508
ENSMUSG00000033960	protein_coding	Jcad	ENSMUST00000234494	retained_intron		18	1	4634878	1007
ENSMUSG00000021374	protein_coding	Nup153	ENSMUST00000183299	processed_transcript		13	-1	46716079	509
ENSMUSG00000076557	IG_V_pseudogene	Igkv4-83	ENSMUST00000196933	IG_V_pseudogene		6	-1	68962007	334
ENSMUSG00000105752	IG_V_pseudogene	Igkv13-82	ENSMUST00000200308	IG_V_pseudogene		6	1	68979198	346
ENSMUSG00000019900	protein_coding	Rfx6	ENSMUST00000122922	protein_coding	principal1	10	1	51677756	3464
ENSMUSG00000098022	protein_coding	Zfp82	ENSMUST00000080834	protein_coding	principal3	7	-1	30072900	2181
ENSMUSG00000076539	IG_V_gene	Igkv4-81	ENSMUST00000197966	IG_V_gene		6	-1	68991294	358
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000170176	nonsense_mediated_decay		17	-1	31512268	3513
ENSMUSG00000076539	IG_V_gene	Igkv4-81	ENSMUST00000103340	IG_V_gene	principal1	6	-1	68991049	290
ENSMUSG00000115705	protein_coding	Vmn1r28	ENSMUST00000227805	protein_coding	principal1	6	1	58262037	10892
ENSMUSG00000115705	protein_coding	Vmn1r28	ENSMUST00000226813	protein_coding	principal1	6	1	58262382	10877
ENSMUSG00000015337	protein_coding	Endog	ENSMUST00000015481	protein_coding	principal1	2	1	30171493	1063
ENSMUSG00000019900	protein_coding	Rfx6	ENSMUST00000219364	protein_coding		10	1	51677810	2682
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000146166	retained_intron		4	-1	132329516	1791
ENSMUSG00000098022	protein_coding	Zfp82	ENSMUST00000182546	protein_coding	alternative2	7	-1	30072133	1964
ENSMUSG00000105539	IG_V_pseudogene	Igkv13-80-1	ENSMUST00000197926	IG_V_pseudogene		6	1	69009143	255
ENSMUSG00000115705	protein_coding	Vmn1r28	ENSMUST00000228678	protein_coding	principal1	6	1	58265174	909
ENSMUSG00000033960	protein_coding	Jcad	ENSMUST00000037029	protein_coding	principal1	18	1	4634878	6782
ENSMUSG00000101966	processed_pseudogene	Gm5248	ENSMUST00000186108	processed_pseudogene		19	-1	35052677	716
ENSMUSG00000117865	lincRNA	Gm50137	ENSMUST00000235823	lincRNA		19	1	35054465	1293
ENSMUSG00000098022	protein_coding	Zfp82	ENSMUST00000183115	protein_coding		7	-1	30072801	631
ENSMUSG00000117673	processed_pseudogene	Gm6974	ENSMUST00000237015	processed_pseudogene		18	-1	64081420	656
ENSMUSG00000033960	protein_coding	Jcad	ENSMUST00000234153	protein_coding	principal1	18	1	4649068	4575
ENSMUSG00000098022	protein_coding	Zfp82	ENSMUST00000182919	protein_coding		7	-1	30072804	600
ENSMUSG00000098421	processed_pseudogene	Gm27190	ENSMUST00000184890	processed_pseudogene		6	-1	7194172	542
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000172284	nonsense_mediated_decay		17	-1	31512283	3633
ENSMUSG00000098022	protein_coding	Zfp82	ENSMUST00000183190	protein_coding		7	-1	30072819	1906
ENSMUSG00000076540	IG_V_gene	Igkv4-80	ENSMUST00000103341	IG_V_gene	principal1	6	-1	69017080	348
ENSMUSG00000083309	unprocessed_pseudogene	Gm15926	ENSMUST00000120492	unprocessed_pseudogene		7	1	4207832	550
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000236665	protein_coding		17	-1	31512309	1897
ENSMUSG00000091734	protein_coding	Vmn1r29	ENSMUST00000228909	protein_coding	principal1	6	1	58301549	4658
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000150959	processed_transcript		4	-1	132329494	650
ENSMUSG00000117973	lincRNA	Gm50140	ENSMUST00000237105	lincRNA		19	1	35117283	468
ENSMUSG00000117973	lincRNA	Gm50140	ENSMUST00000238087	lincRNA		19	1	35129528	593
ENSMUSG00000117585	processed_pseudogene	Gm5047	ENSMUST00000234879	processed_pseudogene		18	1	4743076	801
ENSMUSG00000091734	protein_coding	Vmn1r29	ENSMUST00000227761	protein_coding	principal1	6	1	58301549	4671
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000147652	nonsense_mediated_decay		4	-1	132329389	1017
ENSMUSG00000091734	protein_coding	Vmn1r29	ENSMUST00000228038	protein_coding	principal1	6	1	58301549	4520
ENSMUSG00000099178	processed_pseudogene	Gm8669	ENSMUST00000183839	processed_pseudogene		6	1	7194272	945
ENSMUSG00000019900	protein_coding	Rfx6	ENSMUST00000050455	protein_coding		10	1	51685518	3088
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000169454	retained_intron		17	-1	31501293	1300
ENSMUSG00000044811	protein_coding	Cd300c2	ENSMUST00000092464	protein_coding	principal1	11	-1	115001880	1187
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000127402	protein_coding		4	-1	132329414	474
ENSMUSG00000118212	lincRNA	Gm41836	ENSMUST00000235233	lincRNA		19	-1	35766127	1149
ENSMUSG00000091734	protein_coding	Vmn1r29	ENSMUST00000226971	protein_coding	principal1	6	1	58301549	4714
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000166992	retained_intron		17	-1	31503579	769
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000237127	protein_coding		17	-1	31512218	361
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000040964	protein_coding		18	-1	14682766	4153
ENSMUSG00000091734	protein_coding	Vmn1r29	ENSMUST00000168416	protein_coding	principal1	6	1	58307268	1023
ENSMUSG00000045328	protein_coding	Cenpe	ENSMUST00000062893	protein_coding	principal1	3	1	135212537	7910
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000137520	nonsense_mediated_decay		4	-1	132329504	600
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000131524	processed_transcript		4	-1	132329482	553
ENSMUSG00000076541	IG_V_gene	Igkv4-79	ENSMUST00000103342	IG_V_gene	principal1	6	-1	69043505	358
ENSMUSG00000019900	protein_coding	Rfx6	ENSMUST00000219771	nonsense_mediated_decay		10	1	51693771	2101
ENSMUSG00000020305	protein_coding	Asb3	ENSMUST00000203878	protein_coding	alternative2	11	1	30885416	1813
ENSMUSG00000075702	protein_coding	Selenom	ENSMUST00000123677	processed_transcript		11	1	3514684	1478
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000125513	nonsense_mediated_decay		4	-1	132329538	663
ENSMUSG00000045328	protein_coding	Cenpe	ENSMUST00000197369	protein_coding		3	1	135242210	582
ENSMUSG00000118189	processed_pseudogene	Gm50109	ENSMUST00000237990	processed_pseudogene		18	-1	64137576	585
ENSMUSG00000078768	protein_coding	Zfp566	ENSMUST00000088785	protein_coding	principal1	7	-1	30090527	1709
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000169224	retained_intron		17	-1	31510585	770
ENSMUSG00000093547	processed_pseudogene	Gm20674	ENSMUST00000177452	processed_pseudogene		6	1	58394054	369
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000144387	retained_intron		4	-1	132325276	679
ENSMUSG00000045328	protein_coding	Cenpe	ENSMUST00000200616	retained_intron		3	1	135259242	440
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000105960	protein_coding		4	-1	132329538	371
ENSMUSG00000031365	protein_coding	Zfp275	ENSMUST00000114499	protein_coding	principal1	X	1	73342621	6284
ENSMUSG00000044811	protein_coding	Cd300c2	ENSMUST00000141188	nonsense_mediated_decay		11	-1	115001880	1274
ENSMUSG00000078768	protein_coding	Zfp566	ENSMUST00000182248	retained_intron		7	-1	30090463	382
ENSMUSG00000075702	protein_coding	Selenom	ENSMUST00000131865	processed_transcript		11	1	3514702	972
ENSMUSG00000028898	protein_coding	Trnau1ap	ENSMUST00000141317	retained_intron		4	-1	132329515	621
ENSMUSG00000109218	processed_pseudogene	Gm44872	ENSMUST00000207864	processed_pseudogene		7	1	30085468	420
ENSMUSG00000045328	protein_coding	Cenpe	ENSMUST00000197273	retained_intron		3	1	135260045	747
ENSMUSG00000091011	unprocessed_pseudogene	Gm17187	ENSMUST00000164622	unprocessed_pseudogene		14	1	44777463	410
ENSMUSG00000045328	protein_coding	Cenpe	ENSMUST00000199497	retained_intron		3	1	135270627	532
ENSMUSG00000083389	processed_pseudogene	Gm13681	ENSMUST00000117925	processed_pseudogene		2	1	83428702	210
ENSMUSG00000094707	lincRNA	A830019P07Rik	ENSMUST00000236698	lincRNA		19	-1	35924569	1998
ENSMUSG00000115706	processed_pseudogene	Gm49143	ENSMUST00000227590	processed_pseudogene		14	-1	44783601	411
ENSMUSG00000094707	lincRNA	A830019P07Rik	ENSMUST00000237777	lincRNA		19	-1	35924574	1658
ENSMUSG00000090365	processed_pseudogene	Gm17070	ENSMUST00000170463	processed_pseudogene		14	-1	44805484	784
ENSMUSG00000058447	protein_coding	Gm26920	ENSMUST00000182746	nonsense_mediated_decay	principal1	7	-1	30090410	2374
ENSMUSG00000094707	lincRNA	A830019P07Rik	ENSMUST00000178904	lincRNA		19	-1	35924578	1777
ENSMUSG00000115747	lincRNA	Gm49145	ENSMUST00000227858	lincRNA		14	1	44821886	831
ENSMUSG00000094707	lincRNA	A830019P07Rik	ENSMUST00000236187	lincRNA		19	-1	35923544	476
ENSMUSG00000096499	IG_V_gene	Ighv1-5	ENSMUST00000191803	IG_V_gene		12	-1	114513807	395
ENSMUSG00000115747	lincRNA	Gm49145	ENSMUST00000226720	lincRNA		14	1	44821923	379
ENSMUSG00000094707	lincRNA	A830019P07Rik	ENSMUST00000238067	lincRNA		19	-1	35924569	1080
ENSMUSG00000107863	processed_pseudogene	Gm44389	ENSMUST00000203795	processed_pseudogene		6	-1	60462114	182
ENSMUSG00000017723	protein_coding	Wfdc2	ENSMUST00000146270	processed_transcript		2	1	164562413	398
ENSMUSG00000105480	IG_V_pseudogene	Igkv13-78-1	ENSMUST00000199298	IG_V_pseudogene		6	1	69051617	200
ENSMUSG00000096499	IG_V_gene	Ighv1-5	ENSMUST00000103494	IG_V_gene	principal1	12	-1	114513623	294
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000236913	processed_transcript		17	-1	31512496	761
ENSMUSG00000115521	processed_pseudogene	Gm34198	ENSMUST00000227561	processed_pseudogene		14	1	44846050	301
ENSMUSG00000080949	processed_pseudogene	Gm13683	ENSMUST00000119497	processed_pseudogene		2	1	83451864	1076
ENSMUSG00000070390	protein_coding	Nlrp1b	ENSMUST00000108515	protein_coding	alternative2	11	-1	71201456	4131
ENSMUSG00000094315	IG_V_gene	Igkv4-78	ENSMUST00000103343	IG_V_gene	principal1	6	-1	69060224	358
ENSMUSG00000023104	protein_coding	Rfc2	ENSMUST00000202761	processed_transcript		5	1	134581366	655
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000047898	protein_coding	principal1	19	-1	4398285	8578
ENSMUSG00000105313	IG_V_pseudogene	Gm43583	ENSMUST00000199235	IG_V_pseudogene		6	1	69086185	303
ENSMUSG00000095700	IG_V_gene	Ighv10-3	ENSMUST00000103495	IG_V_gene	principal1	12	-1	114523905	377
ENSMUSG00000105462	IG_V_pseudogene	Igkv4-77	ENSMUST00000199410	IG_V_pseudogene		6	-1	69111432	352
ENSMUSG00000041632	protein_coding	Mrps27	ENSMUST00000052249	protein_coding	principal1	13	1	99344786	1849
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000171291	protein_coding		17	-1	31519965	599
ENSMUSG00000082460	processed_pseudogene	Gm13685	ENSMUST00000122462	processed_pseudogene		2	-1	83538675	141
ENSMUSG00000031173	protein_coding	Otc	ENSMUST00000049910	protein_coding	principal1	X	1	10252305	2319
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000040924	protein_coding	principal3	18	-1	14682914	3098
ENSMUSG00000104609	IG_V_pseudogene	Igkv13-76	ENSMUST00000197621	IG_V_pseudogene		6	1	69137866	347
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000235335	nonsense_mediated_decay		19	-1	4324865	2195
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000235011	protein_coding		18	-1	14651123	2086
ENSMUSG00000104712	IG_V_pseudogene	Igkv4-75	ENSMUST00000197204	IG_V_pseudogene		6	-1	69156659	359
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000167419	processed_transcript		17	-1	31519914	813
ENSMUSG00000041632	protein_coding	Mrps27	ENSMUST00000224660	protein_coding		13	1	99344788	883
ENSMUSG00000020305	protein_coding	Asb3	ENSMUST00000020551	protein_coding	principal2	11	1	30954395	3228
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000176532	nonsense_mediated_decay		19	-1	4322548	570
ENSMUSG00000031173	protein_coding	Otc	ENSMUST00000115528	protein_coding		X	1	10252367	2997
ENSMUSG00000084992	lincRNA	Gm13842	ENSMUST00000156331	lincRNA		5	-1	116028836	865
ENSMUSG00000104922	IG_V_pseudogene	Igkv13-74-1	ENSMUST00000200611	IG_V_pseudogene		6	1	69177423	242
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000175978	retained_intron		19	-1	4322803	767
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000166626	processed_transcript		17	-1	31512278	454
ENSMUSG00000086996	transcribed_processed_pseudogene	4933416E14Rik	ENSMUST00000137955	processed_transcript		X	-1	10417238	1938
ENSMUSG00000086996	transcribed_processed_pseudogene	4933416E14Rik	ENSMUST00000130841	transcribed_processed_pseudogene		X	-1	10417133	491
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000237807	protein_coding		17	-1	31519980	395
ENSMUSG00000084992	lincRNA	Gm13842	ENSMUST00000144932	lincRNA		5	-1	116029230	523
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000237268	retained_intron		19	-1	4328411	894
ENSMUSG00000041632	protein_coding	Mrps27	ENSMUST00000225973	processed_transcript		13	1	99345544	493
ENSMUSG00000104846	lincRNA	Gm43020	ENSMUST00000197178	lincRNA		5	-1	43355259	372
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000092041	protein_coding	alternative1	18	-1	14682828	2911
ENSMUSG00000103915	IG_V_pseudogene	Ighv1-6	ENSMUST00000193849	IG_V_pseudogene		12	-1	114533264	293
ENSMUSG00000031365	protein_coding	Zfp275	ENSMUST00000033731	protein_coding		X	1	73342621	6376
ENSMUSG00000107244	lincRNA	Gm43699	ENSMUST00000201312	lincRNA		5	1	43376447	818
ENSMUSG00000113189	lincRNA	B020018J22Rik	ENSMUST00000223085	lincRNA		12	-1	112435338	3223
ENSMUSG00000070390	protein_coding	Nlrp1b	ENSMUST00000136493	nonsense_mediated_decay		11	-1	71230733	4319
ENSMUSG00000024037	protein_coding	Wdr4	ENSMUST00000171592	processed_transcript		17	-1	31519974	423
ENSMUSG00000115500	processed_pseudogene	Gm49147	ENSMUST00000227025	processed_pseudogene		14	-1	44939266	165
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000234524	protein_coding		18	-1	14682766	2603
ENSMUSG00000070390	protein_coding	Nlrp1b	ENSMUST00000108516	protein_coding	principal3	11	-1	71230733	4134
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000130171	retained_intron		3	-1	20035280	4076
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000176653	protein_coding		19	-1	4334001	1076
ENSMUSG00000104691	lincRNA	Gm43021	ENSMUST00000198692	lincRNA		5	1	43470692	337
ENSMUSG00000031365	protein_coding	Zfp275	ENSMUST00000139996	retained_intron		X	1	73344468	482
ENSMUSG00000020305	protein_coding	Asb3	ENSMUST00000137306	nonsense_mediated_decay		11	1	30954406	3330
ENSMUSG00000116339	lincRNA	Gm35933	ENSMUST00000231197	lincRNA		15	1	76988024	1199
ENSMUSG00000116339	lincRNA	Gm35933	ENSMUST00000230431	lincRNA		15	1	76988059	784
ENSMUSG00000070390	protein_coding	Nlrp1b	ENSMUST00000094046	protein_coding	principal3	11	-1	71228467	3525
ENSMUSG00000095200	IG_V_gene	Ighv1-7	ENSMUST00000103496	IG_V_gene	principal1	12	-1	114538965	388
ENSMUSG00000051980	protein_coding	Casr	ENSMUST00000114847	protein_coding		16	-1	36562134	4303
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000141308	processed_transcript		3	-1	20014124	1987
ENSMUSG00000020305	protein_coding	Asb3	ENSMUST00000117883	protein_coding		11	1	30954419	2509
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000176497	processed_transcript		19	-1	4333919	438
ENSMUSG00000070390	protein_coding	Nlrp1b	ENSMUST00000108514	protein_coding	alternative2	11	-1	71201298	3541
ENSMUSG00000118049	antisense	Gm50103	ENSMUST00000235946	antisense		17	1	31512004	2144
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000116571	protein_coding		19	-1	4397080	2413
ENSMUSG00000020305	protein_coding	Asb3	ENSMUST00000148163	retained_intron		11	1	30954448	1297
ENSMUSG00000066152	protein_coding	Slc31a2	ENSMUST00000107468	protein_coding	alternative1	4	1	62262562	743
ENSMUSG00000090709	antisense	Gm17173	ENSMUST00000168000	antisense		14	-1	45006900	2867
ENSMUSG00000075702	protein_coding	Selenom	ENSMUST00000094469	protein_coding	principal1	11	1	3514867	707
ENSMUSG00000076543	IG_V_gene	Igkv4-74	ENSMUST00000103344	IG_V_gene	principal1	6	-1	69185397	394
ENSMUSG00000032463	protein_coding	Faim	ENSMUST00000035038	protein_coding	principal3	9	1	98986373	1019
ENSMUSG00000022540	protein_coding	Rogdi	ENSMUST00000202281	protein_coding	principal2	16	-1	5013517	1355
ENSMUSG00000020305	protein_coding	Asb3	ENSMUST00000148808	retained_intron		11	1	31058595	643
ENSMUSG00000090709	antisense	Gm17173	ENSMUST00000228273	antisense		14	-1	44989779	540
ENSMUSG00000082213	processed_pseudogene	Gm12102	ENSMUST00000118251	processed_pseudogene		11	-1	31003898	604
ENSMUSG00000105989	IG_V_pseudogene	Igkv13-73-1	ENSMUST00000196767	IG_V_pseudogene		6	1	69190083	200
ENSMUSG00000090709	antisense	Gm17173	ENSMUST00000228945	antisense		14	-1	44989801	365
ENSMUSG00000051980	protein_coding	Casr	ENSMUST00000063597	protein_coding	principal1	16	-1	36562134	4534
ENSMUSG00000043383	protein_coding	Olfr1342	ENSMUST00000216226	protein_coding	principal1	4	-1	118692756	3269
ENSMUSG00000026377	protein_coding	Nifk	ENSMUST00000027626	protein_coding	principal1	1	1	118321839	1889
ENSMUSG00000020128	protein_coding	Vps54	ENSMUST00000006221	protein_coding	principal3	11	1	21239281	4323
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000234224	nonsense_mediated_decay		18	-1	14682764	1549
ENSMUSG00000058659	protein_coding	Olfr58	ENSMUST00000212363	protein_coding		9	1	19780283	478
ENSMUSG00000043383	protein_coding	Olfr1342	ENSMUST00000060562	protein_coding	principal1	4	-1	118690463	1002
ENSMUSG00000102177	lincRNA	Gm37870	ENSMUST00000192349	lincRNA		Y	-1	13426687	1499
ENSMUSG00000022540	protein_coding	Rogdi	ENSMUST00000023191	protein_coding	alternative2	16	-1	5013527	1431
ENSMUSG00000051980	protein_coding	Casr	ENSMUST00000172826	protein_coding	principal1	16	-1	36561606	3659
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000108321	protein_coding		3	-1	20035302	3385
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000238844	retained_intron		18	-1	14637406	1046
ENSMUSG00000026377	protein_coding	Nifk	ENSMUST00000112688	protein_coding		1	1	118321854	849
ENSMUSG00000058659	protein_coding	Olfr58	ENSMUST00000215112	protein_coding	principal1	9	1	19780283	2454
ENSMUSG00000079278	protein_coding	Tmem233	ENSMUST00000111997	protein_coding	principal1	5	-1	116083244	2477
ENSMUSG00000026377	protein_coding	Nifk	ENSMUST00000161495	protein_coding		1	1	118322152	357
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000139446	processed_transcript		3	-1	20012930	988
ENSMUSG00000066152	protein_coding	Slc31a2	ENSMUST00000084530	protein_coding	principal3	4	1	62286449	1820
ENSMUSG00000051980	protein_coding	Casr	ENSMUST00000174750	processed_transcript		16	-1	36562141	400
ENSMUSG00000102177	lincRNA	Gm37870	ENSMUST00000193275	lincRNA		Y	-1	13426234	621
ENSMUSG00000102177	lincRNA	Gm37870	ENSMUST00000192881	lincRNA		Y	-1	13426234	437
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000175777	retained_intron		19	-1	4396917	2073
ENSMUSG00000037759	protein_coding	Ptger2	ENSMUST00000046891	protein_coding	principal1	14	1	44988195	3684
ENSMUSG00000020128	protein_coding	Vps54	ENSMUST00000109578	protein_coding	alternative1	11	1	21239281	4273
ENSMUSG00000022540	protein_coding	Rogdi	ENSMUST00000201726	retained_intron		16	-1	5010661	696
ENSMUSG00000079278	protein_coding	Tmem233	ENSMUST00000239438	protein_coding		5	-1	116083246	702
ENSMUSG00000099936	lincRNA	Gm28867	ENSMUST00000190194	lincRNA		1	1	118357312	2166
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000234120	nonsense_mediated_decay		18	-1	14682778	976
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000175959	protein_coding		19	-1	4362887	738
ENSMUSG00000022540	protein_coding	Rogdi	ENSMUST00000202640	retained_intron		16	-1	5010118	374
ENSMUSG00000020128	protein_coding	Vps54	ENSMUST00000132017	protein_coding		11	1	21268785	2914
ENSMUSG00000037759	protein_coding	Ptger2	ENSMUST00000227198	retained_intron		14	1	44988666	2651
ENSMUSG00000104152	IG_V_pseudogene	Ighv10-4	ENSMUST00000193702	IG_V_pseudogene		12	-1	114547556	299
ENSMUSG00000082997	processed_pseudogene	Gm13975	ENSMUST00000119253	processed_pseudogene		2	1	114708112	782
ENSMUSG00000066152	protein_coding	Slc31a2	ENSMUST00000107467	protein_coding	alternative1	4	1	62291547	868
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000175682	retained_intron		19	-1	4397068	2638
ENSMUSG00000098501	lincRNA	Gm19272	ENSMUST00000185181	lincRNA		6	1	7301908	2217
ENSMUSG00000097781	lincRNA	9330136K24Rik	ENSMUST00000180842	lincRNA		17	-1	21535878	2478
ENSMUSG00000098501	lincRNA	Gm19272	ENSMUST00000184133	lincRNA		6	1	7301908	1753
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000176483	protein_coding		19	-1	4397077	1128
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000234997	retained_intron		18	-1	14682764	2196
ENSMUSG00000020128	protein_coding	Vps54	ENSMUST00000132146	processed_transcript		11	1	21277903	493
ENSMUSG00000022540	protein_coding	Rogdi	ENSMUST00000201118	retained_intron		16	-1	5011825	566
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000176495	retained_intron		19	-1	4397095	3207
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000235043	retained_intron		18	-1	14682765	922
ENSMUSG00000117037	transcribed_processed_pseudogene	Gm50433	ENSMUST00000233302	processed_transcript		17	1	21516713	1507
ENSMUSG00000021615	protein_coding	Xrcc4	ENSMUST00000159199	nonsense_mediated_decay		13	-1	90089523	3422
ENSMUSG00000022540	protein_coding	Rogdi	ENSMUST00000202720	retained_intron		16	-1	5011741	388
ENSMUSG00000020128	protein_coding	Vps54	ENSMUST00000153159	processed_transcript		11	1	21314081	3591
ENSMUSG00000017405	protein_coding	Nek8	ENSMUST00000152611	retained_intron		11	-1	78176611	2882
ENSMUSG00000117037	transcribed_processed_pseudogene	Gm50433	ENSMUST00000233488	transcribed_processed_pseudogene		17	1	21530280	506
ENSMUSG00000032463	protein_coding	Faim	ENSMUST00000112911	protein_coding	alternative1	9	1	98986374	803
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000234737	retained_intron		18	-1	14670786	568
ENSMUSG00000097043	lincRNA	Gm10556	ENSMUST00000180904	lincRNA		18	1	4812486	3906
ENSMUSG00000037013	protein_coding	Ss18	ENSMUST00000234544	retained_intron		18	-1	14682756	2967
ENSMUSG00000022540	protein_coding	Rogdi	ENSMUST00000201077	protein_coding		16	-1	5013485	488
ENSMUSG00000115487	processed_pseudogene	Gm49148	ENSMUST00000228907	processed_pseudogene		14	1	44933163	422
ENSMUSG00000099802	lincRNA	Gm28493	ENSMUST00000188427	lincRNA		2	1	115135550	604
ENSMUSG00000054611	protein_coding	Kdm2a	ENSMUST00000075856	protein_coding	principal1	19	-1	4397077	7242
ENSMUSG00000017723	protein_coding	Wfdc2	ENSMUST00000017867	protein_coding	principal2	2	1	164562579	849
ENSMUSG00000084222	processed_pseudogene	Gm13973	ENSMUST00000121371	processed_pseudogene		2	-1	115037312	894
ENSMUSG00000020128	protein_coding	Vps54	ENSMUST00000143932	processed_transcript		11	1	21300264	623
ENSMUSG00000032463	protein_coding	Faim	ENSMUST00000187211	retained_intron		9	1	98986401	4262
ENSMUSG00000014503	protein_coding	Pkd2l2	ENSMUST00000014647	protein_coding	principal1	18	1	34409423	3788
ENSMUSG00000105536	processed_pseudogene	Gm4959	ENSMUST00000197271	processed_pseudogene		5	1	10558353	1044
ENSMUSG00000017723	protein_coding	Wfdc2	ENSMUST00000109344	protein_coding		2	1	164562699	429
ENSMUSG00000032463	protein_coding	Faim	ENSMUST00000186837	retained_intron		9	1	98986407	965
ENSMUSG00000021615	protein_coding	Xrcc4	ENSMUST00000022115	protein_coding	principal1	13	-1	90089608	1540
ENSMUSG00000017723	protein_coding	Wfdc2	ENSMUST00000109345	protein_coding	alternative2	2	1	164562714	558
ENSMUSG00000020128	protein_coding	Vps54	ENSMUST00000153411	processed_transcript		11	1	21312505	624
ENSMUSG00000099504	unprocessed_pseudogene	Gm28335	ENSMUST00000186204	unprocessed_pseudogene		Y	1	36349735	696
ENSMUSG00000081868	processed_pseudogene	Gm12039	ENSMUST00000118219	processed_pseudogene		11	-1	21280224	180
ENSMUSG00000024798	protein_coding	Htr7	ENSMUST00000164639	protein_coding	principal2	19	-1	36057340	3057
ENSMUSG00000051341	protein_coding	Zfp52	ENSMUST00000233281	protein_coding	principal1	17	1	21535539	3164
ENSMUSG00000071489	protein_coding	Ptgdr	ENSMUST00000095959	protein_coding	principal1	14	-1	44859375	3187
ENSMUSG00000032463	protein_coding	Faim	ENSMUST00000185472	protein_coding		9	1	98991831	568
ENSMUSG00000017723	protein_coding	Wfdc2	ENSMUST00000125051	protein_coding		2	1	164563019	397
ENSMUSG00000084048	processed_pseudogene	Gm12042	ENSMUST00000120479	processed_pseudogene		11	1	21295560	301
ENSMUSG00000022540	protein_coding	Rogdi	ENSMUST00000201651	retained_intron		16	-1	5013553	833
ENSMUSG00000085222	lincRNA	Gm13974	ENSMUST00000144368	lincRNA		2	1	114854093	1454
ENSMUSG00000051341	protein_coding	Zfp52	ENSMUST00000079242	protein_coding	principal1	17	1	21555046	2175
ENSMUSG00000115344	processed_transcript	Gm49364	ENSMUST00000227028	processed_transcript		14	-1	44989624	4669
ENSMUSG00000022540	protein_coding	Rogdi	ENSMUST00000202998	retained_intron		16	-1	5013536	486
ENSMUSG00000096448	processed_pseudogene	Gm5808	ENSMUST00000178090	processed_pseudogene		15	-1	99556192	475
ENSMUSG00000021615	protein_coding	Xrcc4	ENSMUST00000160232	protein_coding		13	-1	90089536	424
ENSMUSG00000014503	protein_coding	Pkd2l2	ENSMUST00000166156	protein_coding	principal1	18	1	34409426	2129
ENSMUSG00000101377	lincRNA	Gm28336	ENSMUST00000190743	lincRNA		Y	-1	36391583	166
ENSMUSG00000115344	processed_transcript	Gm49364	ENSMUST00000226133	processed_transcript		14	-1	44989699	1199
ENSMUSG00000021615	protein_coding	Xrcc4	ENSMUST00000161396	protein_coding		13	-1	90089082	332
ENSMUSG00000099361	sense_intronic	Gm28492	ENSMUST00000190899	sense_intronic		2	1	114938570	1019
ENSMUSG00000022540	protein_coding	Rogdi	ENSMUST00000090453	protein_coding	alternative2	16	-1	5013517	652
ENSMUSG00000113407	processed_pseudogene	Gm47437	ENSMUST00000221991	processed_pseudogene		12	-1	23800646	126
ENSMUSG00000101448	lincRNA	Gm28494	ENSMUST00000187687	lincRNA		2	-1	115220708	562
ENSMUSG00000113160	processed_pseudogene	Gm47440	ENSMUST00000222114	processed_pseudogene		12	-1	23812987	105
ENSMUSG00000101726	processed_pseudogene	Gm7858	ENSMUST00000190177	processed_pseudogene		1	1	29930094	622
ENSMUSG00000070873	protein_coding	Lilra5	ENSMUST00000117550	protein_coding	principal1	7	1	4237754	2109
ENSMUSG00000089940	antisense	Gm4117	ENSMUST00000044500	antisense		13	1	89739460	52401
ENSMUSG00000074596	protein_coding	Spint3	ENSMUST00000099097	protein_coding	principal1	2	-1	164573459	557
ENSMUSG00000089940	antisense	Gm4117	ENSMUST00000161917	antisense		13	1	89739464	723
ENSMUSG00000089972	processed_pseudogene	Gm16318	ENSMUST00000162402	processed_pseudogene		13	1	89662770	601
ENSMUSG00000107517	TEC	Gm44046	ENSMUST00000203145	TEC		6	1	7375967	2678
ENSMUSG00000024798	protein_coding	Htr7	ENSMUST00000165215	nonsense_mediated_decay		19	-1	36057360	3135
ENSMUSG00000020311	protein_coding	Erlec1	ENSMUST00000143126	nonsense_mediated_decay		11	-1	30948085	366
ENSMUSG00000107493	processed_pseudogene	Gm44048	ENSMUST00000204531	processed_pseudogene		6	1	7540954	361
ENSMUSG00000103370	TEC	Gm37178	ENSMUST00000194962	TEC		1	1	189064895	1539
ENSMUSG00000024798	protein_coding	Htr7	ENSMUST00000164781	nonsense_mediated_decay		19	-1	36057360	3155
ENSMUSG00000020311	protein_coding	Erlec1	ENSMUST00000155304	retained_intron		11	-1	30948202	703
ENSMUSG00000020311	protein_coding	Erlec1	ENSMUST00000152770	processed_transcript		11	-1	30954335	532
ENSMUSG00000104464	processed_pseudogene	Gm18698	ENSMUST00000192327	processed_pseudogene		1	-1	189079704	668
ENSMUSG00000075042	processed_transcript	4930431P03Rik	ENSMUST00000228169	lincRNA		14	-1	44961307	1967
ENSMUSG00000024798	protein_coding	Htr7	ENSMUST00000166074	protein_coding	alternative1	19	-1	36057368	3079
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000155058	retained_intron		4	-1	63433322	2537
ENSMUSG00000018893	protein_coding	Mb	ENSMUST00000166179	protein_coding	principal1	15	-1	77050670	1058
ENSMUSG00000004939	protein_coding	Nmrk2	ENSMUST00000005069	protein_coding	principal1	10	-1	81202051	1854
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000145133	retained_intron		4	-1	63433322	2869
ENSMUSG00000102346	lincRNA	Gm37378	ENSMUST00000195795	lincRNA		Y	-1	13454653	621
ENSMUSG00000102346	lincRNA	Gm37378	ENSMUST00000193698	lincRNA		Y	-1	13454653	437
ENSMUSG00000020741	protein_coding	Cluh	ENSMUST00000092915	protein_coding	principal2	11	1	74649515	5379
ENSMUSG00000024798	protein_coding	Htr7	ENSMUST00000170360	nonsense_mediated_decay		19	-1	36057507	1990
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000151752	retained_intron		3	-1	20035302	3272
ENSMUSG00000082902	unprocessed_pseudogene	Ccl19-ps1	ENSMUST00000119621	unprocessed_pseudogene		4	1	41921405	327
ENSMUSG00000075042	processed_transcript	4930431P03Rik	ENSMUST00000166127	lincRNA		14	-1	44961307	4237
ENSMUSG00000082042	unprocessed_pseudogene	Gm15923	ENSMUST00000119300	unprocessed_pseudogene		7	1	4257701	1169
ENSMUSG00000075042	processed_transcript	4930431P03Rik	ENSMUST00000166072	lincRNA		14	-1	44961326	1685
ENSMUSG00000075042	processed_transcript	4930431P03Rik	ENSMUST00000228658	lincRNA		14	-1	44961278	1444
ENSMUSG00000084010	unprocessed_pseudogene	Gm13302	ENSMUST00000119405	unprocessed_pseudogene		4	1	41893388	1849
ENSMUSG00000075042	processed_transcript	4930431P03Rik	ENSMUST00000227019	retained_intron		14	-1	44961280	1838
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000124016	processed_transcript		4	-1	63493600	2741
ENSMUSG00000075042	processed_transcript	4930431P03Rik	ENSMUST00000228859	lincRNA		14	-1	44961278	1053
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000137408	retained_intron		3	-1	20035294	3395
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000124808	retained_intron		3	-1	20035302	2598
ENSMUSG00000020741	protein_coding	Cluh	ENSMUST00000130398	processed_transcript		11	1	74649495	418
ENSMUSG00000024798	protein_coding	Htr7	ENSMUST00000099505	protein_coding		19	-1	36057373	1606
ENSMUSG00000020388	protein_coding	Pdlim4	ENSMUST00000018755	protein_coding	principal1	11	-1	54069014	1182
ENSMUSG00000018893	protein_coding	Mb	ENSMUST00000169226	protein_coding	principal1	15	-1	77022787	1104
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000126644	processed_transcript		3	-1	20035296	2292
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000155121	retained_intron		3	-1	20035294	3824
ENSMUSG00000095900	protein_coding	Gm20773	ENSMUST00000193306	protein_coding	principal1	Y	1	13494026	1341
ENSMUSG00000027615	protein_coding	Hps3	ENSMUST00000133094	processed_transcript		3	-1	20035302	360
ENSMUSG00000106387	IG_V_pseudogene	Igkv4-73	ENSMUST00000199760	IG_V_pseudogene		6	-1	69198116	358
ENSMUSG00000095900	protein_coding	Gm20773	ENSMUST00000178940	protein_coding		Y	1	13495642	681
ENSMUSG00000020741	protein_coding	Cluh	ENSMUST00000127679	processed_transcript		11	1	74649830	664
ENSMUSG00000020388	protein_coding	Pdlim4	ENSMUST00000093109	protein_coding		11	-1	54068932	962
ENSMUSG00000018893	protein_coding	Mb	ENSMUST00000230031	protein_coding		15	-1	77021963	765
ENSMUSG00000023104	protein_coding	Rfc2	ENSMUST00000023867	protein_coding	principal1	5	1	134582690	4995
ENSMUSG00000000171	protein_coding	Sdhd	ENSMUST00000000175	protein_coding	principal1	9	-1	50603812	1231
ENSMUSG00000020388	protein_coding	Pdlim4	ENSMUST00000144477	protein_coding		11	-1	54064796	541
ENSMUSG00000040550	protein_coding	Otud6b	ENSMUST00000117268	protein_coding		4	-1	14826587	3266
ENSMUSG00000018893	protein_coding	Mb	ENSMUST00000229423	protein_coding	principal1	15	-1	77050569	714
ENSMUSG00000102174	unprocessed_pseudogene	Gm36398	ENSMUST00000192255	unprocessed_pseudogene		Y	1	13532809	696
ENSMUSG00000065979	protein_coding	Cpped1	ENSMUST00000096272	protein_coding	principal1	16	-1	11909423	2663
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000110276	protein_coding	principal2	12	1	84361657	1776
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000099718	processed_transcript		14	1	44858671	1894
ENSMUSG00000044860	protein_coding	Gm1123	ENSMUST00000076730	protein_coding	principal1	9	-1	99035715	1537
ENSMUSG00000020388	protein_coding	Pdlim4	ENSMUST00000127271	retained_intron		11	-1	54068991	1370
ENSMUSG00000040550	protein_coding	Otud6b	ENSMUST00000151012	nonsense_mediated_decay		4	-1	14826395	2647
ENSMUSG00000023104	protein_coding	Rfc2	ENSMUST00000201674	retained_intron		5	1	134582757	967
ENSMUSG00000020388	protein_coding	Pdlim4	ENSMUST00000151948	processed_transcript		11	-1	54064568	361
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000127408	processed_transcript		14	1	44858954	1515
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000227507	processed_transcript		14	1	44859099	1137
ENSMUSG00000081723	unprocessed_pseudogene	Gm15931	ENSMUST00000118066	unprocessed_pseudogene		7	1	4274189	1852
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000228178	processed_transcript		14	1	44944129	2602
ENSMUSG00000040550	protein_coding	Otud6b	ENSMUST00000236953	protein_coding	principal1	4	-1	14826587	3257
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000228573	processed_transcript		14	1	44944778	1466
ENSMUSG00000065979	protein_coding	Cpped1	ENSMUST00000121750	protein_coding		16	-1	11909422	2614
ENSMUSG00000108192	lincRNA	Gm44410	ENSMUST00000203151	lincRNA		6	1	60489956	341
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000228852	processed_transcript		14	1	44945073	1089
ENSMUSG00000018893	protein_coding	Mb	ENSMUST00000019037	protein_coding	principal1	15	-1	77022727	550
ENSMUSG00000034958	protein_coding	Atcay	ENSMUST00000146030	nonsense_mediated_decay		10	-1	81230785	3707
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000227260	processed_transcript		14	1	44945138	1326
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000228641	processed_transcript		14	1	44956874	1204
ENSMUSG00000104912	TEC	Gm43023	ENSMUST00000197583	TEC		5	1	43575821	2106
ENSMUSG00000023104	protein_coding	Rfc2	ENSMUST00000201258	nonsense_mediated_decay		5	1	134591520	671
ENSMUSG00000028741	protein_coding	Mrto4	ENSMUST00000131052	processed_transcript		4	-1	139349603	835
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000226409	processed_transcript		14	1	44956891	522
ENSMUSG00000065979	protein_coding	Cpped1	ENSMUST00000145169	retained_intron		16	-1	11909396	1698
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000227946	processed_transcript		14	1	44956892	714
ENSMUSG00000023104	protein_coding	Rfc2	ENSMUST00000200767	retained_intron		5	1	134592705	738
ENSMUSG00000094065	protein_coding	Ccl21d	ENSMUST00000098128	protein_coding	principal1	4	1	41903610	870
ENSMUSG00000108003	lincRNA	Gm35386	ENSMUST00000204603	lincRNA		6	1	60586778	629
ENSMUSG00000104547	TEC	Gm43022	ENSMUST00000197067	TEC		5	1	43528626	4268
ENSMUSG00000106274	processed_pseudogene	Gm42828	ENSMUST00000199669	processed_pseudogene		5	-1	10668543	469
ENSMUSG00000085500	transcribed_unprocessed_pseudogene	Gm16976	ENSMUST00000227324	transcribed_unprocessed_pseudogene		14	1	44974027	226
ENSMUSG00000018893	protein_coding	Mb	ENSMUST00000229125	protein_coding		15	-1	77026125	331
ENSMUSG00000065979	protein_coding	Cpped1	ENSMUST00000127972	protein_coding		16	-1	11909398	783
ENSMUSG00000022340	protein_coding	Sybu	ENSMUST00000227081	processed_transcript		15	-1	44747917	2655
ENSMUSG00000023104	protein_coding	Rfc2	ENSMUST00000201464	retained_intron		5	1	134594119	831
ENSMUSG00000017405	protein_coding	Nek8	ENSMUST00000017549	protein_coding	principal1	11	-1	78176675	2809
ENSMUSG00000020741	protein_coding	Cluh	ENSMUST00000155558	retained_intron		11	1	74649540	6098
ENSMUSG00000115268	processed_pseudogene	Gm18524	ENSMUST00000228048	processed_pseudogene		14	1	44905748	769
ENSMUSG00000101709	unprocessed_pseudogene	Gm28337	ENSMUST00000190425	unprocessed_pseudogene		Y	-1	36435435	666
ENSMUSG00000049643	protein_coding	2310022A10Rik	ENSMUST00000067386	protein_coding	principal2	7	1	27553233	2701
ENSMUSG00000020741	protein_coding	Cluh	ENSMUST00000117818	protein_coding	alternative2	11	1	74649515	4284
ENSMUSG00000065979	protein_coding	Cpped1	ENSMUST00000073371	protein_coding		16	-1	11909445	1922
ENSMUSG00000049643	protein_coding	2310022A10Rik	ENSMUST00000191126	protein_coding		7	1	27553267	690
ENSMUSG00000029777	protein_coding	Gars	ENSMUST00000003572	protein_coding	principal1	6	1	55038007	2380
ENSMUSG00000017405	protein_coding	Nek8	ENSMUST00000125528	retained_intron		11	-1	78167387	906
ENSMUSG00000105295	processed_pseudogene	Gm42834	ENSMUST00000196845	processed_pseudogene		5	-1	10707164	256
ENSMUSG00000012422	protein_coding	Tmem167	ENSMUST00000161568	protein_coding	principal1	13	1	90089123	8689
ENSMUSG00000085730	antisense	Gm13307	ENSMUST00000141375	antisense		4	-1	41942092	493
ENSMUSG00000020741	protein_coding	Cluh	ENSMUST00000128155	retained_intron		11	1	74664482	635
ENSMUSG00000017405	protein_coding	Nek8	ENSMUST00000131015	retained_intron		11	-1	78176627	2561
ENSMUSG00000105657	TEC	Gm42833	ENSMUST00000196019	TEC		5	-1	10743175	2124
ENSMUSG00000049643	protein_coding	2310022A10Rik	ENSMUST00000190903	processed_transcript		7	1	27553270	426
ENSMUSG00000055015	lincRNA	Gm9961	ENSMUST00000068397	lincRNA		16	1	11901363	547
ENSMUSG00000029777	protein_coding	Gars	ENSMUST00000205258	retained_intron		6	1	55048063	754
ENSMUSG00000017405	protein_coding	Nek8	ENSMUST00000141444	retained_intron		11	-1	78168033	626
ENSMUSG00000017405	protein_coding	Nek8	ENSMUST00000147798	retained_intron		11	-1	78169828	575
ENSMUSG00000085730	antisense	Gm13307	ENSMUST00000142990	antisense		4	-1	41941611	425
ENSMUSG00000029777	protein_coding	Gars	ENSMUST00000203334	retained_intron		6	1	55050095	834
ENSMUSG00000074595	protein_coding	Wfdc6a	ENSMUST00000099096	protein_coding	principal1	2	-1	164585177	805
ENSMUSG00000012422	protein_coding	Tmem167	ENSMUST00000161457	nonsense_mediated_decay		13	1	90089734	1226
ENSMUSG00000017405	protein_coding	Nek8	ENSMUST00000142812	retained_intron		11	-1	78176614	2876
ENSMUSG00000049643	protein_coding	2310022A10Rik	ENSMUST00000187960	protein_coding	alternative2	7	1	27553286	1989
ENSMUSG00000023013	protein_coding	Aqp2	ENSMUST00000023752	protein_coding	principal1	15	1	99579055	1419
ENSMUSG00000061535	protein_coding	C1qtnf7	ENSMUST00000076939	protein_coding	alternative1	5	1	43515538	3879
ENSMUSG00000012422	protein_coding	Tmem167	ENSMUST00000012566	protein_coding		13	1	90089762	1541
ENSMUSG00000017405	protein_coding	Nek8	ENSMUST00000148154	protein_coding		11	-1	78176634	668
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000124257	retained_intron		12	1	84361996	2851
ENSMUSG00000074595	protein_coding	Wfdc6a	ENSMUST00000109342	protein_coding	principal1	2	-1	164585447	796
ENSMUSG00000091422	lincRNA	Gm6455	ENSMUST00000095015	lincRNA		5	1	10865029	1072
ENSMUSG00000049643	protein_coding	2310022A10Rik	ENSMUST00000187032	protein_coding	alternative2	7	1	27560476	1871
ENSMUSG00000091422	lincRNA	Gm6455	ENSMUST00000198483	lincRNA		5	1	10866016	339
ENSMUSG00000061535	protein_coding	C1qtnf7	ENSMUST00000144558	protein_coding		5	1	43515762	649
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000152913	nonsense_mediated_decay		12	1	84362030	1583
ENSMUSG00000091422	lincRNA	Gm6455	ENSMUST00000168057	lincRNA		5	1	10867186	1024
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000110278	protein_coding	alternative2	12	1	84362039	1354
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000153450	processed_transcript		12	1	84362041	417
ENSMUSG00000049643	protein_coding	2310022A10Rik	ENSMUST00000186826	retained_intron		7	1	27560497	2156
ENSMUSG00000078747	protein_coding	Gm20878	ENSMUST00000108028	protein_coding		4	1	41941572	339
ENSMUSG00000021091	protein_coding	Serpina3n	ENSMUST00000021506	protein_coding	principal1	12	1	104406729	2064
ENSMUSG00000099814	lincRNA	Gm28338	ENSMUST00000186269	lincRNA		Y	-1	36498950	1499
ENSMUSG00000049643	protein_coding	2310022A10Rik	ENSMUST00000190656	protein_coding		7	1	27565658	775
ENSMUSG00000078747	protein_coding	Gm20878	ENSMUST00000151103	processed_transcript		4	1	41941589	360
ENSMUSG00000085851	antisense	4921518K17Rik	ENSMUST00000143949	antisense		12	-1	57618602	3390
ENSMUSG00000111886	processed_pseudogene	Gm47617	ENSMUST00000217711	processed_pseudogene		12	-1	57699062	462
ENSMUSG00000061535	protein_coding	C1qtnf7	ENSMUST00000121872	protein_coding	principal3	5	1	43601913	1283
ENSMUSG00000049643	protein_coding	2310022A10Rik	ENSMUST00000186501	processed_transcript		7	1	27574467	340
ENSMUSG00000099814	lincRNA	Gm28338	ENSMUST00000188790	lincRNA		Y	-1	36498497	434
ENSMUSG00000099814	lincRNA	Gm28338	ENSMUST00000186161	lincRNA		Y	-1	36498497	618
ENSMUSG00000114355	lincRNA	Gm40916	ENSMUST00000225532	lincRNA		13	-1	37648236	1149
ENSMUSG00000112911	antisense	BC042761	ENSMUST00000218344	antisense		12	-1	57662911	938
ENSMUSG00000087290	antisense	Gm15866	ENSMUST00000149048	antisense		5	-1	43557769	785
ENSMUSG00000066489	processed_pseudogene	Rpl26-ps2	ENSMUST00000085379	processed_pseudogene		12	-1	57633015	435
ENSMUSG00000025579	protein_coding	Gaa	ENSMUST00000106259	protein_coding	principal1	11	1	119267887	3633
ENSMUSG00000033576	protein_coding	Apol6	ENSMUST00000142405	nonsense_mediated_decay		15	1	77044729	1829
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000150391	retained_intron		12	1	84362043	2056
ENSMUSG00000111986	lincRNA	1700008C04Rik	ENSMUST00000218606	lincRNA		12	1	51005158	797
ENSMUSG00000112926	processed_pseudogene	Gm7172	ENSMUST00000218047	processed_pseudogene		12	-1	51134702	1152
ENSMUSG00000039713	protein_coding	Plekhg5	ENSMUST00000105662	protein_coding	alternative2	4	1	152072498	3933
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000145522	protein_coding		12	1	84362064	699
ENSMUSG00000025579	protein_coding	Gaa	ENSMUST00000026666	protein_coding	principal1	11	1	119268026	3363
ENSMUSG00000087290	antisense	Gm15866	ENSMUST00000152116	antisense		5	-1	43601731	914
ENSMUSG00000047227	protein_coding	Gm527	ENSMUST00000058135	protein_coding	principal1	12	1	64917906	1468
ENSMUSG00000039713	protein_coding	Plekhg5	ENSMUST00000239128	retained_intron		4	1	152076286	485
ENSMUSG00000033576	protein_coding	Apol6	ENSMUST00000127957	protein_coding	principal4	15	1	77045075	2034
ENSMUSG00000025579	protein_coding	Gaa	ENSMUST00000106258	protein_coding		11	1	119268028	1369
ENSMUSG00000047227	protein_coding	Gm527	ENSMUST00000220993	protein_coding		12	1	64917969	1090
ENSMUSG00000078747	protein_coding	Gm20878	ENSMUST00000123767	processed_transcript		4	1	41941599	559
ENSMUSG00000114828	lincRNA	AI463229	ENSMUST00000225013	lincRNA		13	-1	37667734	1986
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000140961	processed_transcript		12	1	84368426	740
ENSMUSG00000039713	protein_coding	Plekhg5	ENSMUST00000239025	protein_coding	alternative2	4	1	152076383	3312
ENSMUSG00000039016	protein_coding	Timm8b	ENSMUST00000044051	protein_coding	principal1	9	1	50603910	518
ENSMUSG00000047227	protein_coding	Gm527	ENSMUST00000223388	protein_coding		12	1	64920784	771
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000126913	processed_transcript		12	1	84368426	1294
ENSMUSG00000114828	lincRNA	AI463229	ENSMUST00000225734	lincRNA		13	-1	37666542	696
ENSMUSG00000033576	protein_coding	Apol6	ENSMUST00000129468	protein_coding		15	1	77045206	398
ENSMUSG00000076545	IG_V_gene	Igkv4-72	ENSMUST00000103346	IG_V_gene	principal1	6	-1	69227433	402
ENSMUSG00000114828	lincRNA	AI463229	ENSMUST00000224972	lincRNA		13	-1	37666587	1092
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000156592	retained_intron		12	1	84371002	304
ENSMUSG00000039713	protein_coding	Plekhg5	ENSMUST00000118648	protein_coding	alternative2	4	1	152086858	3818
ENSMUSG00000114828	lincRNA	AI463229	ENSMUST00000224151	lincRNA		13	-1	37667284	1463
ENSMUSG00000047227	protein_coding	Gm527	ENSMUST00000220928	processed_transcript		12	1	64922739	598
ENSMUSG00000105968	IG_V_pseudogene	Igkv13-71-1	ENSMUST00000199934	IG_V_pseudogene		6	1	69235758	264
ENSMUSG00000025579	protein_coding	Gaa	ENSMUST00000128753	processed_transcript		11	1	119270516	965
ENSMUSG00000078747	protein_coding	Gm20878	ENSMUST00000153997	protein_coding	principal1	4	1	41941599	903
ENSMUSG00000044217	protein_coding	Aqp5	ENSMUST00000169082	protein_coding	principal1	15	1	99590782	1797
ENSMUSG00000039660	protein_coding	Spout1	ENSMUST00000142669	retained_intron		2	-1	30178429	2424
ENSMUSG00000025579	protein_coding	Gaa	ENSMUST00000132706	protein_coding		11	1	119274568	816
ENSMUSG00000025579	protein_coding	Gaa	ENSMUST00000150562	protein_coding		11	1	119274856	536
ENSMUSG00000046782	protein_coding	Ttc6	ENSMUST00000101398	protein_coding		12	1	57564113	1484
ENSMUSG00000039660	protein_coding	Spout1	ENSMUST00000127309	retained_intron		2	-1	30178442	2123
ENSMUSG00000078747	protein_coding	Gm20878	ENSMUST00000145219	processed_transcript		4	1	41941621	452
ENSMUSG00000025579	protein_coding	Gaa	ENSMUST00000138510	processed_transcript		11	1	119278876	241
ENSMUSG00000039660	protein_coding	Spout1	ENSMUST00000136630	retained_intron		2	-1	30177505	1606
ENSMUSG00000033576	protein_coding	Apol6	ENSMUST00000149569	protein_coding	alternative2	15	1	77045276	2314
ENSMUSG00000039713	protein_coding	Plekhg5	ENSMUST00000105661	protein_coding	principal2	4	1	152096719	3842
ENSMUSG00000021235	protein_coding	Coq6	ENSMUST00000021661	protein_coding	principal2	12	1	84361968	1602
ENSMUSG00000078747	protein_coding	Gm20878	ENSMUST00000108027	processed_transcript		4	1	41941717	584
ENSMUSG00000025579	protein_coding	Gaa	ENSMUST00000143288	protein_coding		11	1	119277714	792
ENSMUSG00000028221	protein_coding	Pip4p2	ENSMUST00000029875	protein_coding	principal1	4	1	14864076	2339
ENSMUSG00000092600	lincRNA	Gm20442	ENSMUST00000174630	lincRNA		17	-1	35764191	492
ENSMUSG00000039660	protein_coding	Spout1	ENSMUST00000146466	retained_intron		2	-1	30177984	2396
ENSMUSG00000044217	protein_coding	Aqp5	ENSMUST00000229728	protein_coding		15	1	99591151	1415
ENSMUSG00000034958	protein_coding	Atcay	ENSMUST00000047408	protein_coding	principal1	10	-1	81230833	3736
ENSMUSG00000028778	protein_coding	Hcrtr1	ENSMUST00000120154	protein_coding	principal1	4	-1	130138551	2161
ENSMUSG00000033576	protein_coding	Apol6	ENSMUST00000152949	protein_coding		15	1	77045278	995
ENSMUSG00000044217	protein_coding	Aqp5	ENSMUST00000231163	protein_coding		15	1	99591234	831
ENSMUSG00000035916	protein_coding	Ptprq	ENSMUST00000050702	protein_coding	principal1	10	-1	107720051	7393
ENSMUSG00000100316	unprocessed_pseudogene	Gm28812	ENSMUST00000185963	unprocessed_pseudogene		Y	1	36648203	696
ENSMUSG00000078747	protein_coding	Gm20878	ENSMUST00000155656	processed_transcript		4	1	41941726	765
ENSMUSG00000033576	protein_coding	Apol6	ENSMUST00000148197	processed_transcript		15	1	77045487	397
ENSMUSG00000039713	protein_coding	Plekhg5	ENSMUST00000084115	protein_coding	alternative2	4	1	152096719	4113
ENSMUSG00000044217	protein_coding	Aqp5	ENSMUST00000230998	retained_intron		15	1	99591860	1739
ENSMUSG00000028778	protein_coding	Hcrtr1	ENSMUST00000030562	protein_coding	principal1	4	-1	130139162	2187
ENSMUSG00000092171	lincRNA	4833427F10Rik	ENSMUST00000172874	lincRNA		17	1	35772450	1475
ENSMUSG00000101284	lincRNA	Gm28811	ENSMUST00000190650	lincRNA		Y	1	36676980	442
ENSMUSG00000078747	protein_coding	Gm20878	ENSMUST00000181518	protein_coding	principal1	4	1	41942037	264
ENSMUSG00000033576	protein_coding	Apol6	ENSMUST00000139304	processed_transcript		15	1	77052751	595
ENSMUSG00000034958	protein_coding	Atcay	ENSMUST00000133555	retained_intron		10	-1	81213276	752
ENSMUSG00000028741	protein_coding	Mrto4	ENSMUST00000102503	protein_coding	alternative2	4	-1	139352576	1221
ENSMUSG00000046782	protein_coding	Ttc6	ENSMUST00000172939	protein_coding	principal1	12	1	57575817	5782
ENSMUSG00000044217	protein_coding	Aqp5	ENSMUST00000229264	retained_intron		15	1	99592448	443
ENSMUSG00000039713	protein_coding	Plekhg5	ENSMUST00000123615	retained_intron		4	1	152104500	384
ENSMUSG00000104942	processed_pseudogene	Gm3321	ENSMUST00000200603	processed_pseudogene		5	1	10875621	1129
ENSMUSG00000021536	protein_coding	Adcy2	ENSMUST00000022013	protein_coding	principal1	13	-1	68999541	4211
ENSMUSG00000116272	antisense	Gm49540	ENSMUST00000230714	antisense		15	1	77014093	638
ENSMUSG00000046782	protein_coding	Ttc6	ENSMUST00000172852	protein_coding		12	1	57649415	843
ENSMUSG00000113873	unprocessed_pseudogene	Gm46342	ENSMUST00000223411	unprocessed_pseudogene		12	1	23896367	602
ENSMUSG00000028778	protein_coding	Hcrtr1	ENSMUST00000119423	protein_coding	principal1	4	-1	130139359	2439
ENSMUSG00000111103	bidirectional_promoter_lncRNA	1700016J18Rik	ENSMUST00000214172	bidirectional_promoter_lncRNA		10	1	42018216	249
ENSMUSG00000113606	processed_pseudogene	Gm47441	ENSMUST00000223385	processed_pseudogene		12	1	23903253	117
ENSMUSG00000100651	lincRNA	Gm28810	ENSMUST00000188173	lincRNA		Y	-1	36690165	166
ENSMUSG00000044217	protein_coding	Aqp5	ENSMUST00000088200	protein_coding	principal1	15	1	99590849	1376
ENSMUSG00000085779	antisense	Atcayos	ENSMUST00000129834	antisense		10	1	81194609	1350
ENSMUSG00000039713	protein_coding	Plekhg5	ENSMUST00000140085	retained_intron		4	1	152107636	2792
ENSMUSG00000028741	protein_coding	Mrto4	ENSMUST00000030513	protein_coding	principal3	4	-1	139352298	930
ENSMUSG00000114151	processed_pseudogene	Gm47442	ENSMUST00000222799	processed_pseudogene		12	1	23937396	108
ENSMUSG00000113859	processed_pseudogene	Gm7979	ENSMUST00000223009	processed_pseudogene		13	1	68856533	1025
ENSMUSG00000028778	protein_coding	Hcrtr1	ENSMUST00000164887	protein_coding	principal1	4	-1	130137628	1251
ENSMUSG00000039713	protein_coding	Plekhg5	ENSMUST00000142412	retained_intron		4	1	152107729	387
ENSMUSG00000112958	processed_pseudogene	Gm47443	ENSMUST00000222778	processed_pseudogene		12	-1	23941384	101
ENSMUSG00000113505	TEC	Gm48593	ENSMUST00000223248	TEC		13	-1	68998019	2483
ENSMUSG00000028741	protein_coding	Mrto4	ENSMUST00000128239	retained_intron		4	-1	139349621	678
ENSMUSG00000116700	processed_pseudogene	Gm18694	ENSMUST00000232040	processed_pseudogene		16	1	49369052	1226
ENSMUSG00000062224	lincRNA	4933411G06Rik	ENSMUST00000075909	lincRNA		10	-1	51757194	1022
ENSMUSG00000020311	protein_coding	Erlec1	ENSMUST00000073192	protein_coding	principal1	11	-1	30954152	2532
ENSMUSG00000035916	protein_coding	Ptprq	ENSMUST00000218399	processed_transcript		10	-1	107720027	3415
ENSMUSG00000062224	lincRNA	4933411G06Rik	ENSMUST00000219766	lincRNA		10	-1	51757194	1021
ENSMUSG00000099787	protein_coding	Vmn1r192	ENSMUST00000238109	protein_coding	principal1	13	-1	22191141	4704
ENSMUSG00000023995	protein_coding	Tspo2	ENSMUST00000159478	retained_intron		17	-1	48451492	3195
ENSMUSG00000041730	protein_coding	Prrxl1	ENSMUST00000187377	protein_coding		14	1	32599407	1629
ENSMUSG00000003541	protein_coding	Ier3	ENSMUST00000003635	protein_coding	principal1	17	1	35821684	1131
ENSMUSG00000078808	protein_coding	Vmn1r58	ENSMUST00000228728	protein_coding	principal1	7	-1	5413396	9991
ENSMUSG00000112270	lincRNA	Gm47613	ENSMUST00000220412	lincRNA		10	1	51757257	602
ENSMUSG00000113121	antisense	Gm35161	ENSMUST00000221765	antisense		13	1	68998793	941
ENSMUSG00000028741	protein_coding	Mrto4	ENSMUST00000155257	protein_coding		4	-1	139352311	470
ENSMUSG00000085779	antisense	Atcayos	ENSMUST00000129950	antisense		10	1	81194683	1117
ENSMUSG00000041730	protein_coding	Prrxl1	ENSMUST00000189022	protein_coding	principal1	14	1	32599408	2985
ENSMUSG00000113121	antisense	Gm35161	ENSMUST00000222786	antisense		13	1	69000422	623
ENSMUSG00000099787	protein_coding	Vmn1r192	ENSMUST00000072632	protein_coding	principal1	13	-1	22188140	1066
ENSMUSG00000112337	lincRNA	Gm47614	ENSMUST00000217696	lincRNA		10	-1	51786941	434
ENSMUSG00000028741	protein_coding	Mrto4	ENSMUST00000139749	retained_intron		4	-1	139352533	756
ENSMUSG00000020311	protein_coding	Erlec1	ENSMUST00000129593	nonsense_mediated_decay		11	-1	30948469	977
ENSMUSG00000098242	processed_pseudogene	Gm26929	ENSMUST00000182703	processed_pseudogene		13	1	68810080	753
ENSMUSG00000085779	antisense	Atcayos	ENSMUST00000150782	antisense		10	1	81194691	3057
ENSMUSG00000028741	protein_coding	Mrto4	ENSMUST00000123968	retained_intron		4	-1	139352310	662
ENSMUSG00000078808	protein_coding	Vmn1r58	ENSMUST00000227549	processed_transcript		7	-1	5413396	9097
ENSMUSG00000112659	lincRNA	Gm40646	ENSMUST00000218243	lincRNA		10	-1	51970265	490
ENSMUSG00000078808	protein_coding	Vmn1r58	ENSMUST00000226315	processed_transcript		7	-1	5413396	8948
ENSMUSG00000032487	protein_coding	Ptgs2	ENSMUST00000035065	protein_coding	principal1	1	1	150100031	4453
ENSMUSG00000041730	protein_coding	Prrxl1	ENSMUST00000186452	protein_coding	principal1	14	1	32599541	2371
ENSMUSG00000112659	lincRNA	Gm40646	ENSMUST00000218796	lincRNA		10	-1	51970291	793
ENSMUSG00000045699	protein_coding	Gm21411	ENSMUST00000238583	protein_coding	principal5	4	-1	146909527	1296
ENSMUSG00000078808	protein_coding	Vmn1r58	ENSMUST00000108569	protein_coding	principal1	7	-1	5413396	10140
ENSMUSG00000114022	processed_pseudogene	Gm17330	ENSMUST00000221047	processed_pseudogene		12	-1	23968845	165
ENSMUSG00000103035	TEC	Gm37122	ENSMUST00000195313	TEC		13	1	69016622	1567
ENSMUSG00000103667	IG_V_pseudogene	Ighv1-8	ENSMUST00000192236	IG_V_pseudogene		12	-1	114555902	293
ENSMUSG00000112704	lincRNA	Gm46329	ENSMUST00000218373	lincRNA		12	1	57951211	609
ENSMUSG00000113607	processed_pseudogene	Gm47444	ENSMUST00000222418	processed_pseudogene		12	-1	23977228	105
ENSMUSG00000102466	TEC	Gm38200	ENSMUST00000192083	TEC		3	-1	51559652	2111
ENSMUSG00000067608	processed_pseudogene	Pcna-ps2	ENSMUST00000088040	processed_pseudogene		19	1	9283380	781
ENSMUSG00000045699	protein_coding	Gm21411	ENSMUST00000049821	protein_coding	alternative2	4	-1	146909590	750
ENSMUSG00000063120	protein_coding	Olfr480	ENSMUST00000217653	protein_coding	principal1	7	-1	108067346	1876
ENSMUSG00000112557	processed_pseudogene	Gm47626	ENSMUST00000219916	processed_pseudogene		10	-1	51989579	3238
ENSMUSG00000083027	processed_pseudogene	Gm13140	ENSMUST00000119840	processed_pseudogene		4	1	146942476	3151
ENSMUSG00000063120	protein_coding	Olfr480	ENSMUST00000071658	protein_coding		7	-1	108066796	1029
ENSMUSG00000101398	unprocessed_pseudogene	Gm2617	ENSMUST00000185690	unprocessed_pseudogene		19	-1	9339986	1066
ENSMUSG00000053185	lincRNA	Gm9898	ENSMUST00000065469	lincRNA		1	-1	30719962	1161
ENSMUSG00000023995	protein_coding	Tspo2	ENSMUST00000024794	protein_coding	principal1	17	-1	48451522	956
ENSMUSG00000041730	protein_coding	Prrxl1	ENSMUST00000068938	protein_coding		14	1	32599867	1610
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000032457	protein_coding	principal3	6	1	114643097	3761
ENSMUSG00000106652	lincRNA	Gm43358	ENSMUST00000199217	lincRNA		5	-1	10946571	970
ENSMUSG00000032487	protein_coding	Ptgs2	ENSMUST00000190784	protein_coding		1	1	150100332	358
ENSMUSG00000097885	processed_transcript	5031434O11Rik	ENSMUST00000180404	antisense		3	1	51560035	3731
ENSMUSG00000071640	processed_pseudogene	Stxbp3-ps	ENSMUST00000090527	processed_pseudogene		19	-1	9559183	758
ENSMUSG00000030421	protein_coding	Uri1	ENSMUST00000085513	protein_coding	principal1	7	-1	38019542	3441
ENSMUSG00000041730	protein_coding	Prrxl1	ENSMUST00000228878	protein_coding		14	1	32599958	723
ENSMUSG00000023995	protein_coding	Tspo2	ENSMUST00000162481	protein_coding		17	-1	48450073	473
ENSMUSG00000039660	protein_coding	Spout1	ENSMUST00000100220	protein_coding	principal1	2	-1	30178450	1805
ENSMUSG00000054236	protein_coding	Olfr481	ENSMUST00000213601	protein_coding	principal1	7	1	108079855	5247
ENSMUSG00000097885	processed_transcript	5031434O11Rik	ENSMUST00000181303	antisense		3	1	51562471	1694
ENSMUSG00000023995	protein_coding	Tspo2	ENSMUST00000159988	protein_coding		17	-1	48450070	479
ENSMUSG00000097885	processed_transcript	5031434O11Rik	ENSMUST00000180616	retained_intron		3	1	51563641	659
ENSMUSG00000054236	protein_coding	Olfr481	ENSMUST00000067143	protein_coding	principal1	7	1	108080796	939
ENSMUSG00000023995	protein_coding	Tspo2	ENSMUST00000160259	processed_transcript		17	-1	48451517	345
ENSMUSG00000059862	protein_coding	Olfr826	ENSMUST00000203720	protein_coding	principal1	10	-1	130184186	1535
ENSMUSG00000109670	unprocessed_pseudogene	Gm45375	ENSMUST00000210338	unprocessed_pseudogene		7	1	108081864	280
ENSMUSG00000089753	protein_coding	Cd300ld2	ENSMUST00000106578	protein_coding	principal1	11	-1	115016193	918
ENSMUSG00000000167	protein_coding	Pih1d2	ENSMUST00000000171	protein_coding	principal1	9	1	50617321	1256
ENSMUSG00000096719	protein_coding	Mrgpra2b	ENSMUST00000119798	protein_coding	principal2	7	-1	47489586	1265
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000067646	protein_coding	principal4	9	1	21367871	3549
ENSMUSG00000089753	protein_coding	Cd300ld2	ENSMUST00000092463	protein_coding		11	-1	115016193	381
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000169310	protein_coding	alternative2	6	1	114643112	3895
ENSMUSG00000030421	protein_coding	Uri1	ENSMUST00000205927	processed_transcript		7	-1	37969628	2630
ENSMUSG00000086122	antisense	Gm14507	ENSMUST00000156169	antisense		5	1	116243706	347
ENSMUSG00000059862	protein_coding	Olfr826	ENSMUST00000216661	protein_coding	principal1	10	-1	130184173	2858
ENSMUSG00000030421	protein_coding	Uri1	ENSMUST00000206327	protein_coding		7	-1	38019566	2453
ENSMUSG00000096719	protein_coding	Mrgpra2b	ENSMUST00000172559	protein_coding	alternative2	7	-1	47528862	1234
ENSMUSG00000109484	processed_pseudogene	Gm44870	ENSMUST00000207291	processed_pseudogene		7	-1	108094485	357
ENSMUSG00000059862	protein_coding	Olfr826	ENSMUST00000078322	protein_coding	principal1	10	-1	130180878	942
ENSMUSG00000025889	protein_coding	Snca	ENSMUST00000163779	protein_coding	principal1	6	-1	60829855	1188
ENSMUSG00000101780	unprocessed_pseudogene	Gm7255	ENSMUST00000187371	unprocessed_pseudogene		7	-1	47531784	908
ENSMUSG00000030421	protein_coding	Uri1	ENSMUST00000205918	protein_coding		7	-1	37962528	366
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000183127	retained_intron		6	1	114643116	966
ENSMUSG00000059031	protein_coding	Olfr482	ENSMUST00000217304	protein_coding	principal1	7	-1	108097586	2612
ENSMUSG00000000167	protein_coding	Pih1d2	ENSMUST00000132187	nonsense_mediated_decay		9	1	50617383	1157
ENSMUSG00000035431	protein_coding	Sstr1	ENSMUST00000110671	protein_coding	principal1	12	1	58211772	1752
ENSMUSG00000026068	protein_coding	Il18rap	ENSMUST00000027237	protein_coding	principal1	1	1	40515362	4889
ENSMUSG00000086655	antisense	C330018A13Rik	ENSMUST00000127792	antisense		5	1	116123614	1599
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000015612	protein_coding	principal1	17	1	34564268	6591
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182169	protein_coding		6	1	114643118	462
ENSMUSG00000030421	protein_coding	Uri1	ENSMUST00000206581	protein_coding		7	-1	38023551	1753
ENSMUSG00000059031	protein_coding	Olfr482	ENSMUST00000081184	protein_coding	principal1	7	-1	108095568	972
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000183165	protein_coding		6	1	114643122	2012
ENSMUSG00000100261	unprocessed_pseudogene	Gm6473	ENSMUST00000188572	unprocessed_pseudogene		1	1	30769687	1210
ENSMUSG00000000167	protein_coding	Pih1d2	ENSMUST00000124029	retained_intron		9	1	50617333	1493
ENSMUSG00000101933	protein_coding	Gm20835	ENSMUST00000185565	protein_coding	principal1	Y	-1	36735290	923
ENSMUSG00000062110	protein_coding	Scfd2	ENSMUST00000072857	protein_coding	principal1	5	-1	74531749	3672
ENSMUSG00000030421	protein_coding	Uri1	ENSMUST00000205809	processed_transcript		7	-1	37965777	422
ENSMUSG00000095448	protein_coding	Olfr859	ENSMUST00000217280	protein_coding	principal1	9	1	19804908	9596
ENSMUSG00000025889	protein_coding	Snca	ENSMUST00000114268	protein_coding	principal1	6	-1	60829004	1280
ENSMUSG00000101944	unprocessed_pseudogene	Mrgprc4-ps	ENSMUST00000186018	unprocessed_pseudogene		7	-1	47540220	964
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000126950	processed_transcript		17	1	34564298	356
ENSMUSG00000000167	protein_coding	Pih1d2	ENSMUST00000155773	retained_intron		9	1	50617521	450
ENSMUSG00000109577	processed_pseudogene	Gm44543	ENSMUST00000209136	processed_pseudogene		7	1	5414736	396
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000213518	protein_coding		9	1	21367938	3513
ENSMUSG00000095448	protein_coding	Olfr859	ENSMUST00000212540	protein_coding	principal1	9	1	19804906	9532
ENSMUSG00000030421	protein_coding	Uri1	ENSMUST00000206169	nonsense_mediated_decay		7	-1	38019522	440
ENSMUSG00000000167	protein_coding	Pih1d2	ENSMUST00000141366	protein_coding		9	1	50617550	836
ENSMUSG00000035431	protein_coding	Sstr1	ENSMUST00000044299	protein_coding	principal1	12	1	58211804	2014
ENSMUSG00000062110	protein_coding	Scfd2	ENSMUST00000202465	processed_transcript		5	-1	74288610	318
ENSMUSG00000026068	protein_coding	Il18rap	ENSMUST00000163057	retained_intron		1	1	40515405	1439
ENSMUSG00000095448	protein_coding	Olfr859	ENSMUST00000086480	protein_coding	principal1	9	1	19808320	930
ENSMUSG00000026068	protein_coding	Il18rap	ENSMUST00000159724	retained_intron		1	1	40515448	2447
ENSMUSG00000025889	protein_coding	Snca	ENSMUST00000204586	processed_transcript		6	-1	60827556	569
ENSMUSG00000112333	lincRNA	1700048P04Rik	ENSMUST00000219825	lincRNA		10	-1	68904500	369
ENSMUSG00000000167	protein_coding	Pih1d2	ENSMUST00000125606	protein_coding		9	1	50618007	888
ENSMUSG00000062110	protein_coding	Scfd2	ENSMUST00000146015	retained_intron		5	-1	74225484	597
ENSMUSG00000025889	protein_coding	Snca	ENSMUST00000203177	retained_intron		6	-1	60828872	1407
ENSMUSG00000026068	protein_coding	Il18rap	ENSMUST00000160468	retained_intron		1	1	40541692	622
ENSMUSG00000062110	protein_coding	Scfd2	ENSMUST00000113542	protein_coding		5	-1	74531752	2279
ENSMUSG00000039660	protein_coding	Spout1	ENSMUST00000144093	retained_intron		2	-1	30178459	2010
ENSMUSG00000107755	processed_pseudogene	Mageb16-ps2	ENSMUST00000204513	processed_pseudogene		6	-1	60771059	1093
ENSMUSG00000112331	lincRNA	Gm33035	ENSMUST00000219854	lincRNA		10	-1	69033888	1718
ENSMUSG00000000167	protein_coding	Pih1d2	ENSMUST00000151197	protein_coding		9	1	50617337	1059
ENSMUSG00000108168	TEC	Gm43864	ENSMUST00000204452	TEC		6	-1	60795867	4028
ENSMUSG00000062110	protein_coding	Scfd2	ENSMUST00000148994	protein_coding		5	-1	74397738	436
ENSMUSG00000045559	protein_coding	Olfr827	ENSMUST00000213568	protein_coding	principal1	10	-1	130214403	8457
ENSMUSG00000110368	lincRNA	Gm45518	ENSMUST00000210776	lincRNA		8	-1	64711076	2583
ENSMUSG00000110427	lincRNA	4933406B17Rik	ENSMUST00000212602	lincRNA		8	1	95496430	4333
ENSMUSG00000039660	protein_coding	Spout1	ENSMUST00000137656	processed_transcript		2	-1	30177965	906
ENSMUSG00000029326	protein_coding	Enoph1	ENSMUST00000169390	protein_coding	principal1	5	1	100039985	1833
ENSMUSG00000045559	protein_coding	Olfr827	ENSMUST00000216253	processed_transcript		10	-1	130214403	8219
ENSMUSG00000110427	lincRNA	4933406B17Rik	ENSMUST00000212927	lincRNA		8	1	95496447	1479
ENSMUSG00000021234	protein_coding	Fam161b	ENSMUST00000065536	protein_coding	principal1	12	-1	84361833	3000
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000219987	retained_intron		10	1	80702184	695
ENSMUSG00000029015	protein_coding	Slc26a5	ENSMUST00000115176	protein_coding		5	-1	21861998	2768
ENSMUSG00000112907	lincRNA	Gm47015	ENSMUST00000217947	lincRNA		10	-1	79417905	2709
ENSMUSG00000112083	lincRNA	Gm47107	ENSMUST00000218524	lincRNA		10	-1	69097866	526
ENSMUSG00000062110	protein_coding	Scfd2	ENSMUST00000075848	nonsense_mediated_decay		5	-1	74531729	2261
ENSMUSG00000039660	protein_coding	Spout1	ENSMUST00000125141	retained_intron		2	-1	30178455	1095
ENSMUSG00000045559	protein_coding	Olfr827	ENSMUST00000058123	protein_coding	principal1	10	-1	130211149	1058
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000173389	nonsense_mediated_decay		17	1	34564337	6380
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000219746	retained_intron		10	1	80702307	419
ENSMUSG00000037111	protein_coding	Setd7	ENSMUST00000037141	protein_coding	principal1	3	-1	51560879	7411
ENSMUSG00000049641	protein_coding	Vgll2	ENSMUST00000163017	protein_coding	principal1	10	1	52022502	1650
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000217742	retained_intron		10	1	80702307	854
ENSMUSG00000111941	lincRNA	Gm33263	ENSMUST00000220371	lincRNA		10	-1	69151132	459
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000219986	retained_intron		10	1	80702307	1845
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000152714	retained_intron		17	1	34565136	352
ENSMUSG00000021234	protein_coding	Fam161b	ENSMUST00000021659	protein_coding	principal1	12	-1	84361821	3357
ENSMUSG00000029326	protein_coding	Enoph1	ENSMUST00000031268	protein_coding	principal1	5	1	100040044	1420
ENSMUSG00000063166	processed_pseudogene	Gm5449	ENSMUST00000081132	processed_pseudogene		13	1	53525703	357
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000214217	retained_intron		9	1	21367946	4679
ENSMUSG00000104733	processed_pseudogene	Gm29784	ENSMUST00000196217	processed_pseudogene		5	-1	26828505	406
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000174707	processed_transcript		17	1	34578008	451
ENSMUSG00000037111	protein_coding	Setd7	ENSMUST00000195080	retained_intron		3	-1	51536647	423
ENSMUSG00000027368	protein_coding	Dusp2	ENSMUST00000028846	protein_coding	principal1	2	1	127336159	1617
ENSMUSG00000105946	TEC	Gm43776	ENSMUST00000199729	TEC		5	1	27195955	2914
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000216892	protein_coding		9	1	21367955	3684
ENSMUSG00000029015	protein_coding	Slc26a5	ENSMUST00000030878	protein_coding	principal1	5	-1	21865604	2962
ENSMUSG00000108726	lincRNA	Gm30684	ENSMUST00000205632	lincRNA		7	-1	38061700	600
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182098	protein_coding		6	1	114643127	340
ENSMUSG00000029326	protein_coding	Enoph1	ENSMUST00000199518	retained_intron		5	1	100040068	720
ENSMUSG00000108334	lincRNA	Gm30771	ENSMUST00000205683	lincRNA		7	1	38059316	737
ENSMUSG00000071324	protein_coding	Armc2	ENSMUST00000160262	protein_coding	principal1	10	-1	42018436	4810
ENSMUSG00000113834	lincRNA	Gm34022	ENSMUST00000223156	lincRNA		13	-1	53533257	730
ENSMUSG00000029326	protein_coding	Enoph1	ENSMUST00000200223	processed_transcript		5	1	100061971	744
ENSMUSG00000037111	protein_coding	Setd7	ENSMUST00000161755	retained_intron		3	-1	51537128	1043
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000151654	nonsense_mediated_decay		17	1	34583882	733
ENSMUSG00000062110	protein_coding	Scfd2	ENSMUST00000151474	protein_coding		5	-1	74531759	3834
ENSMUSG00000110511	antisense	Gm45699	ENSMUST00000212838	antisense		9	1	19842073	1576
ENSMUSG00000081970	processed_pseudogene	Gm16057	ENSMUST00000120811	processed_pseudogene		5	-1	27007621	759
ENSMUSG00000037111	protein_coding	Setd7	ENSMUST00000194828	retained_intron		3	-1	51551320	2638
ENSMUSG00000047026	protein_coding	Acsm4	ENSMUST00000047045	protein_coding	principal1	7	1	119690026	2152
ENSMUSG00000118218	processed_pseudogene	Gm50154	ENSMUST00000236049	processed_pseudogene		18	1	66418459	293
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000151867	nonsense_mediated_decay		17	1	34583882	804
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182793	protein_coding	principal3	6	1	114643127	2459
ENSMUSG00000027368	protein_coding	Dusp2	ENSMUST00000146479	retained_intron		2	1	127336610	756
ENSMUSG00000029015	protein_coding	Slc26a5	ENSMUST00000142888	nonsense_mediated_decay		5	-1	21847380	2064
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000214852	protein_coding		9	1	21368003	698
ENSMUSG00000021234	protein_coding	Fam161b	ENSMUST00000133230	retained_intron		12	-1	84361792	3203
ENSMUSG00000116948	processed_pseudogene	Gm4802	ENSMUST00000231844	processed_pseudogene		16	-1	49412630	370
ENSMUSG00000029015	protein_coding	Slc26a5	ENSMUST00000127975	protein_coding		5	-1	21847332	2141
ENSMUSG00000062110	protein_coding	Scfd2	ENSMUST00000142216	retained_intron		5	-1	74479126	620
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000128314	retained_intron		17	1	34584568	796
ENSMUSG00000049421	protein_coding	Zfp260	ENSMUST00000123095	processed_transcript		7	1	30094777	363
ENSMUSG00000046790	protein_coding	Olfr1341	ENSMUST00000214131	protein_coding	principal1	4	1	118703523	4300
ENSMUSG00000045930	protein_coding	Clec14a	ENSMUST00000062254	protein_coding	principal1	12	-1	58269290	4571
ENSMUSG00000021234	protein_coding	Fam161b	ENSMUST00000126752	retained_intron		12	-1	84354855	686
ENSMUSG00000097959	processed_pseudogene	Gm6931	ENSMUST00000183137	processed_pseudogene		16	1	49424806	1009
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000115414	protein_coding	alternative2	9	1	21368003	3606
ENSMUSG00000039128	protein_coding	Cdc123	ENSMUST00000043864	protein_coding	principal1	2	-1	5845164	1827
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000150441	retained_intron		17	1	34585665	642
ENSMUSG00000029015	protein_coding	Slc26a5	ENSMUST00000150012	retained_intron		5	-1	21820517	393
ENSMUSG00000062110	protein_coding	Scfd2	ENSMUST00000123203	processed_transcript		5	-1	74531742	2144
ENSMUSG00000091381	protein_coding	Vmn2r83	ENSMUST00000233065	protein_coding	alternative2	10	1	79468731	3638
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182902	protein_coding	principal3	6	1	114643129	2543
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000141768	retained_intron		17	1	34586275	598
ENSMUSG00000091381	protein_coding	Vmn2r83	ENSMUST00000233240	nonsense_mediated_decay		10	1	79468731	3517
ENSMUSG00000046790	protein_coding	Olfr1341	ENSMUST00000215117	protein_coding	principal1	4	1	118703523	4700
ENSMUSG00000112487	processed_pseudogene	Gm18873	ENSMUST00000219517	processed_pseudogene		12	1	58763906	1045
ENSMUSG00000112011	processed_pseudogene	Gm9535	ENSMUST00000218499	processed_pseudogene		10	-1	15783976	768
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000214474	protein_coding		9	1	21368532	397
ENSMUSG00000102768	processed_pseudogene	Gm19002	ENSMUST00000192649	processed_pseudogene		1	1	7315451	1012
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000126702	processed_transcript		17	1	34586945	247
ENSMUSG00000084132	transcribed_unprocessed_pseudogene	Gm15982	ENSMUST00000121681	transcribed_unprocessed_pseudogene		5	-1	74358419	554
ENSMUSG00000066905	protein_coding	Olfr860	ENSMUST00000086482	protein_coding	principal1	9	-1	19849747	1686
ENSMUSG00000049421	protein_coding	Zfp260	ENSMUST00000050735	protein_coding	principal1	7	1	30094794	4006
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182428	protein_coding	alternative2	6	1	114643129	2264
ENSMUSG00000039128	protein_coding	Cdc123	ENSMUST00000130142	processed_transcript		2	-1	5798598	592
ENSMUSG00000046790	protein_coding	Olfr1341	ENSMUST00000061215	protein_coding	principal1	4	1	118709409	939
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000213603	protein_coding		9	1	21373473	3430
ENSMUSG00000069609	protein_coding	Cd300ld4	ENSMUST00000100240	protein_coding	principal1	11	-1	115027012	852
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182035	protein_coding		6	1	114643131	758
ENSMUSG00000015468	protein_coding	Notch4	ENSMUST00000156724	processed_transcript		17	1	34587041	619
ENSMUSG00000039128	protein_coding	Cdc123	ENSMUST00000124662	retained_intron		2	-1	5804372	555
ENSMUSG00000098098	lincRNA	Bvht	ENSMUST00000183083	lincRNA		18	1	61639542	483
ENSMUSG00000080700	transcribed_processed_pseudogene	Gm15981	ENSMUST00000119196	transcribed_processed_pseudogene		5	-1	74317034	457
ENSMUSG00000097797	lincRNA	Gm26901	ENSMUST00000181554	lincRNA		1	-1	7397801	1193
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000214758	protein_coding		9	1	21377126	3177
ENSMUSG00000022244	protein_coding	Amacr	ENSMUST00000070877	protein_coding	principal1	15	1	10981756	2577
ENSMUSG00000066905	protein_coding	Olfr860	ENSMUST00000212353	protein_coding	principal1	9	-1	19846652	1030
ENSMUSG00000091381	protein_coding	Vmn2r83	ENSMUST00000167976	protein_coding	principal2	10	1	79468839	4145
ENSMUSG00000049421	protein_coding	Zfp260	ENSMUST00000149302	retained_intron		7	1	30095162	641
ENSMUSG00000092406	processed_pseudogene	Gm20462	ENSMUST00000172623	processed_pseudogene		17	-1	34568137	408
ENSMUSG00000098098	lincRNA	Bvht	ENSMUST00000183087	lincRNA		18	1	61639653	588
ENSMUSG00000107209	TEC	Gm42599	ENSMUST00000201308	TEC		5	-1	74249616	469
ENSMUSG00000039128	protein_coding	Cdc123	ENSMUST00000138312	processed_transcript		2	-1	5810822	307
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182510	protein_coding		6	1	114648846	650
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000217476	retained_intron		9	1	21384218	3813
ENSMUSG00000049421	protein_coding	Zfp260	ENSMUST00000130526	protein_coding		7	1	30095169	573
ENSMUSG00000097797	lincRNA	Gm26901	ENSMUST00000193106	lincRNA		1	-1	7397795	256
ENSMUSG00000091381	protein_coding	Vmn2r83	ENSMUST00000233629	nonsense_mediated_decay		10	1	79468839	4089
ENSMUSG00000045691	protein_coding	Thtpa	ENSMUST00000050575	protein_coding	principal1	14	1	55094784	2830
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182034	protein_coding		6	1	114652436	784
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000214821	nonsense_mediated_decay		9	1	21388531	443
ENSMUSG00000066905	protein_coding	Olfr860	ENSMUST00000211924	protein_coding		9	-1	19849747	855
ENSMUSG00000091381	protein_coding	Vmn2r83	ENSMUST00000233849	nonsense_mediated_decay		10	1	79468839	4024
ENSMUSG00000112785	lincRNA	Gm47645	ENSMUST00000220177	lincRNA		12	1	58813883	1315
ENSMUSG00000049421	protein_coding	Zfp260	ENSMUST00000134365	processed_transcript		7	1	30095178	594
ENSMUSG00000022244	protein_coding	Amacr	ENSMUST00000228886	processed_transcript		15	1	10983406	633
ENSMUSG00000097797	lincRNA	Gm26901	ENSMUST00000193732	lincRNA		1	-1	7397869	631
ENSMUSG00000049421	protein_coding	Zfp260	ENSMUST00000108200	protein_coding	principal1	7	1	30095185	3604
ENSMUSG00000070821	protein_coding	Olfr1340	ENSMUST00000217334	protein_coding	principal1	4	1	118720138	2001
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182771	protein_coding		6	1	114658064	359
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000217498	nonsense_mediated_decay		9	1	21388552	900
ENSMUSG00000097797	lincRNA	Gm26901	ENSMUST00000193428	retained_intron		1	-1	7381389	2703
ENSMUSG00000039128	protein_coding	Cdc123	ENSMUST00000124287	retained_intron		2	-1	5833183	516
ENSMUSG00000048703	protein_coding	Speer4b	ENSMUST00000053257	protein_coding	principal1	5	-1	27501438	2193
ENSMUSG00000070821	protein_coding	Olfr1340	ENSMUST00000213436	protein_coding	principal1	4	1	118720195	1948
ENSMUSG00000019933	protein_coding	Mrln	ENSMUST00000188568	processed_transcript		10	1	70204664	451
ENSMUSG00000039128	protein_coding	Cdc123	ENSMUST00000128467	protein_coding		2	-1	5833678	772
ENSMUSG00000049421	protein_coding	Zfp260	ENSMUST00000182136	retained_intron		7	1	30098157	1945
ENSMUSG00000087165	processed_transcript	2010001A14Rik	ENSMUST00000152790	processed_transcript		11	-1	57801417	714
ENSMUSG00000019785	protein_coding	Clvs2	ENSMUST00000019920	protein_coding	principal1	10	-1	33624769	2717
ENSMUSG00000103498	processed_pseudogene	Gm18984	ENSMUST00000193998	processed_pseudogene		1	1	7410679	1124
ENSMUSG00000087165	processed_transcript	2010001A14Rik	ENSMUST00000132378	processed_transcript		11	-1	57801414	543
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000203130	processed_transcript		6	1	114680162	489
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000204593	retained_intron		6	1	114683284	2208
ENSMUSG00000108262	processed_pseudogene	Gm43867	ENSMUST00000203860	processed_pseudogene		6	-1	60882963	525
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000215169	nonsense_mediated_decay		9	1	21397469	2118
ENSMUSG00000048703	protein_coding	Speer4b	ENSMUST00000155721	protein_coding		5	-1	27501362	963
ENSMUSG00000078118	protein_coding	Olfr483	ENSMUST00000215159	protein_coding	principal1	7	1	108100849	2691
ENSMUSG00000087165	processed_transcript	2010001A14Rik	ENSMUST00000140069	processed_transcript		11	-1	57801398	502
ENSMUSG00000103067	lincRNA	Gm30414	ENSMUST00000194886	lincRNA		1	1	7497968	2596
ENSMUSG00000070821	protein_coding	Olfr1340	ENSMUST00000216242	protein_coding	principal1	4	1	118720195	3341
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000217348	protein_coding		9	1	21399152	1125
ENSMUSG00000102320	processed_pseudogene	Gm37791	ENSMUST00000195081	processed_pseudogene		1	1	7591646	286
ENSMUSG00000048015	protein_coding	Neurod4	ENSMUST00000061571	protein_coding	principal1	10	-1	130280240	3345
ENSMUSG00000048703	protein_coding	Speer4b	ENSMUST00000124535	retained_intron		5	-1	27501391	440
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182860	processed_transcript		6	1	114723100	590
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000215438	retained_intron		9	1	21399635	415
ENSMUSG00000019785	protein_coding	Clvs2	ENSMUST00000159533	processed_transcript		10	-1	33624196	1027
ENSMUSG00000070821	protein_coding	Olfr1340	ENSMUST00000094834	protein_coding	principal1	4	1	118726249	951
ENSMUSG00000104226	processed_pseudogene	Gm7470	ENSMUST00000194219	processed_pseudogene		1	1	7597379	2095
ENSMUSG00000080941	processed_pseudogene	Gm16056	ENSMUST00000119293	processed_pseudogene		5	-1	26860101	135
ENSMUSG00000113599	lincRNA	9530014B07Rik	ENSMUST00000221882	lincRNA		13	-1	53639193	744
ENSMUSG00000039128	protein_coding	Cdc123	ENSMUST00000152519	retained_intron		2	-1	5844941	600
ENSMUSG00000030314	protein_coding	Atg7	ENSMUST00000182934	processed_transcript		6	1	114856151	408
ENSMUSG00000019785	protein_coding	Clvs2	ENSMUST00000161692	protein_coding		10	-1	33624619	4283
ENSMUSG00000078118	protein_coding	Olfr483	ENSMUST00000104917	protein_coding	principal1	7	1	108103279	1065
ENSMUSG00000071324	protein_coding	Armc2	ENSMUST00000105503	retained_intron		10	-1	41976744	5194
ENSMUSG00000039128	protein_coding	Cdc123	ENSMUST00000152998	retained_intron		2	-1	5823119	276
ENSMUSG00000019933	protein_coding	Mrln	ENSMUST00000020090	protein_coding	principal1	10	1	70204667	443
ENSMUSG00000103903	processed_pseudogene	Rps2-ps2	ENSMUST00000194305	processed_pseudogene		1	1	7664081	881
ENSMUSG00000104441	antisense	Gm35801	ENSMUST00000193927	antisense		1	-1	40580662	479
ENSMUSG00000118568	processed_pseudogene	AC122843.1	ENSMUST00000238907	processed_pseudogene		6	1	114751359	169
ENSMUSG00000032178	protein_coding	Ilf3	ENSMUST00000214200	retained_intron		9	1	21403633	871
ENSMUSG00000019785	protein_coding	Clvs2	ENSMUST00000160299	protein_coding		10	-1	33624622	2610
ENSMUSG00000071324	protein_coding	Armc2	ENSMUST00000160367	retained_intron		10	-1	41976122	3546
ENSMUSG00000039128	protein_coding	Cdc123	ENSMUST00000150876	processed_transcript		2	-1	5844851	562
ENSMUSG00000019933	protein_coding	Mrln	ENSMUST00000190199	protein_coding		10	1	70204710	306
ENSMUSG00000104441	antisense	Gm35801	ENSMUST00000194262	antisense		1	-1	40580648	319
ENSMUSG00000071324	protein_coding	Armc2	ENSMUST00000161927	nonsense_mediated_decay		10	-1	42018442	2926
ENSMUSG00000103557	processed_pseudogene	Gm38216	ENSMUST00000194872	processed_pseudogene		1	-1	7730565	1214
ENSMUSG00000019933	protein_coding	Mrln	ENSMUST00000187318	processed_transcript		10	1	70204725	322
ENSMUSG00000112248	TEC	Gm47910	ENSMUST00000219677	TEC		10	-1	33583829	3142
ENSMUSG00000036572	protein_coding	Upf3b	ENSMUST00000076265	protein_coding	principal1	X	-1	37110322	2344
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000193042	protein_coding		1	1	158362273	7248
ENSMUSG00000107395	processed_pseudogene	Gm44331	ENSMUST00000203217	processed_pseudogene		6	1	114789390	388
ENSMUSG00000102676	TEC	Gm37435	ENSMUST00000192078	TEC		1	-1	40586841	3947
ENSMUSG00000071324	protein_coding	Armc2	ENSMUST00000161167	protein_coding		10	-1	41993166	550
ENSMUSG00000107676	TEC	Gm44178	ENSMUST00000205229	TEC		6	1	88919708	2930
ENSMUSG00000019933	protein_coding	Mrln	ENSMUST00000189468	retained_intron		10	1	70216897	404
ENSMUSG00000061576	protein_coding	Dpp6	ENSMUST00000149678	processed_transcript		5	1	26817203	2520
ENSMUSG00000112369	TEC	Gm47911	ENSMUST00000217704	TEC		10	-1	33621709	2474
ENSMUSG00000110171	protein_coding	Olfr484	ENSMUST00000214722	protein_coding	principal1	7	-1	108127449	4676
ENSMUSG00000107566	processed_pseudogene	Gm44332	ENSMUST00000203712	processed_pseudogene		6	1	114751530	433
ENSMUSG00000022602	protein_coding	Arc	ENSMUST00000023268	protein_coding	principal1	15	-1	74672568	3055
ENSMUSG00000107411	processed_pseudogene	Gm19040	ENSMUST00000203280	processed_pseudogene		6	1	114738534	4726
ENSMUSG00000090087	antisense	Gm15939	ENSMUST00000160756	antisense		10	1	33624246	2147
ENSMUSG00000036572	protein_coding	Upf3b	ENSMUST00000130324	protein_coding		X	-1	37104523	780
ENSMUSG00000049530	protein_coding	Clrn2	ENSMUST00000053250	protein_coding	principal1	5	1	45453751	944
ENSMUSG00000110171	protein_coding	Olfr484	ENSMUST00000210881	protein_coding	principal1	7	-1	108125296	1098
ENSMUSG00000071324	protein_coding	Armc2	ENSMUST00000162405	protein_coding		10	-1	42018380	1135
ENSMUSG00000043913	protein_coding	Ccdc60	ENSMUST00000050178	protein_coding	principal1	5	-1	116288985	3522
ENSMUSG00000100141	unprocessed_pseudogene	Gm6445	ENSMUST00000189515	unprocessed_pseudogene		19	1	9607104	1112
ENSMUSG00000022602	protein_coding	Arc	ENSMUST00000110009	protein_coding	principal1	15	-1	74672570	3054
ENSMUSG00000113329	lincRNA	4930555G21Rik	ENSMUST00000221718	lincRNA		13	1	53648585	537
ENSMUSG00000096818	unprocessed_pseudogene	Gm29231	ENSMUST00000179850	unprocessed_pseudogene		19	1	9605121	319
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000218184	protein_coding	principal1	10	1	80702426	1196
ENSMUSG00000117756	processed_pseudogene	Gm50320	ENSMUST00000235774	processed_pseudogene		19	1	9827117	120
ENSMUSG00000043913	protein_coding	Ccdc60	ENSMUST00000086483	protein_coding		5	-1	116288963	2168
ENSMUSG00000036572	protein_coding	Upf3b	ENSMUST00000133481	processed_transcript		X	-1	37110322	2553
ENSMUSG00000115207	TEC	Gm49132	ENSMUST00000228734	TEC		14	1	47116296	4144
ENSMUSG00000022340	protein_coding	Sybu	ENSMUST00000110267	protein_coding	alternative2	15	-1	44752458	3127
ENSMUSG00000108995	protein_coding	Olfr485	ENSMUST00000208296	protein_coding	principal1	7	-1	108159871	954
ENSMUSG00000071324	protein_coding	Armc2	ENSMUST00000161081	protein_coding		10	-1	42018382	669
ENSMUSG00000118383	lincRNA	Gm50321	ENSMUST00000236905	lincRNA		19	-1	9836897	2697
ENSMUSG00000106324	processed_pseudogene	Gm43222	ENSMUST00000199013	processed_pseudogene		3	-1	97126113	603
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000046110	protein_coding	principal1	1	1	158362304	7195
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000095426	protein_coding		10	1	80702724	763
ENSMUSG00000086055	antisense	Gm13837	ENSMUST00000126326	antisense		5	1	116257661	337
ENSMUSG00000116946	lincRNA	Gm41442	ENSMUST00000232655	lincRNA		16	1	31233590	4551
ENSMUSG00000071324	protein_coding	Armc2	ENSMUST00000095729	protein_coding	principal1	10	-1	42018382	4855
ENSMUSG00000116946	lincRNA	Gm41442	ENSMUST00000232234	lincRNA		16	1	31236122	4608
ENSMUSG00000049600	protein_coding	Zbtb45	ENSMUST00000210282	protein_coding	principal1	7	-1	13009800	3908
ENSMUSG00000022340	protein_coding	Sybu	ENSMUST00000227305	protein_coding	alternative2	15	-1	44752458	3124
ENSMUSG00000097515	lincRNA	1700040D17Rik	ENSMUST00000181305	lincRNA		3	-1	94412919	998
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000219420	retained_intron		10	1	80702753	372
ENSMUSG00000089640	processed_pseudogene	Gm6397	ENSMUST00000161973	processed_pseudogene		1	1	143683230	1069
ENSMUSG00000076688	IG_V_gene	Ighv15-2	ENSMUST00000195337	IG_V_gene	principal5	12	-1	114565012	354
ENSMUSG00000096068	protein_coding	Olfr486	ENSMUST00000072035	protein_coding	principal1	7	-1	108172742	945
ENSMUSG00000046620	processed_pseudogene	Rps11-ps4	ENSMUST00000062226	processed_pseudogene		12	1	51297487	474
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000218058	retained_intron		10	1	80702766	619
ENSMUSG00000009092	protein_coding	Derl3	ENSMUST00000009236	protein_coding	principal2	10	1	75893413	1321
ENSMUSG00000076688	IG_V_gene	Ighv15-2	ENSMUST00000103497	IG_V_gene	alternative2	12	-1	114565012	351
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000217823	retained_intron		10	1	80702767	1564
ENSMUSG00000106688	lincRNA	Gm42851	ENSMUST00000201325	lincRNA		5	-1	33948990	1411
ENSMUSG00000049600	protein_coding	Zbtb45	ENSMUST00000051390	protein_coding	principal1	7	-1	13009830	2171
ENSMUSG00000059820	protein_coding	Nkapd1	ENSMUST00000131351	protein_coding	principal1	9	-1	50617464	3316
ENSMUSG00000096872	protein_coding	Scgb2a2	ENSMUST00000179814	protein_coding	principal1	19	1	9847562	1107
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000170718	protein_coding		1	1	158362340	2927
ENSMUSG00000032462	protein_coding	Pik3cb	ENSMUST00000035037	protein_coding	principal1	9	-1	99140087	6478
ENSMUSG00000094694	IG_V_gene	Ighv1-9	ENSMUST00000193893	IG_V_gene	principal5	12	-1	114584002	351
ENSMUSG00000107043	lincRNA	Gm42849	ENSMUST00000202834	lincRNA		5	1	33947026	1584
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000219152	retained_intron		10	1	80703059	472
ENSMUSG00000009092	protein_coding	Derl3	ENSMUST00000217811	protein_coding	alternative2	10	1	75893415	1316
ENSMUSG00000049600	protein_coding	Zbtb45	ENSMUST00000209997	protein_coding		7	-1	13009830	721
ENSMUSG00000094694	IG_V_gene	Ighv1-9	ENSMUST00000103498	IG_V_gene	alternative2	12	-1	114584002	348
ENSMUSG00000040536	protein_coding	Necab1	ENSMUST00000041606	protein_coding	principal1	4	-1	15149131	4922
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000194369	protein_coding		1	1	158362537	3344
ENSMUSG00000090258	protein_coding	Churc1	ENSMUST00000041262	protein_coding	principal1	12	1	76765538	676
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000218330	nonsense_mediated_decay		10	1	80703074	475
ENSMUSG00000049600	protein_coding	Zbtb45	ENSMUST00000210108	protein_coding		7	-1	13010034	350
ENSMUSG00000059820	protein_coding	Nkapd1	ENSMUST00000145139	protein_coding		9	-1	50617267	2805
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000218538	retained_intron		10	1	80704063	452
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000195311	protein_coding		1	1	158362550	3642
ENSMUSG00000040536	protein_coding	Necab1	ENSMUST00000108273	protein_coding	principal1	4	-1	15149794	2135
ENSMUSG00000009092	protein_coding	Derl3	ENSMUST00000219568	retained_intron		10	1	75893422	362
ENSMUSG00000090258	protein_coding	Churc1	ENSMUST00000110399	protein_coding		12	1	76765575	535
ENSMUSG00000055862	protein_coding	Izumo4	ENSMUST00000219422	retained_intron		10	1	80704310	451
ENSMUSG00000040536	protein_coding	Necab1	ENSMUST00000141105	processed_transcript		4	-1	15148961	510
ENSMUSG00000059820	protein_coding	Nkapd1	ENSMUST00000155435	protein_coding		9	-1	50617281	732
ENSMUSG00000024521	protein_coding	Pmaip1	ENSMUST00000025399	protein_coding	principal2	18	1	66458533	2727
ENSMUSG00000022340	protein_coding	Sybu	ENSMUST00000090057	protein_coding	principal4	15	-1	44788063	3230
ENSMUSG00000049600	protein_coding	Zbtb45	ENSMUST00000172240	protein_coding	principal1	7	-1	13009822	2722
ENSMUSG00000090258	protein_coding	Churc1	ENSMUST00000152917	retained_intron		12	1	76768488	5224
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000192619	processed_transcript		1	1	158509877	680
ENSMUSG00000009092	protein_coding	Derl3	ENSMUST00000218506	processed_transcript		10	1	75893431	815
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000193599	protein_coding		1	1	158552708	719
ENSMUSG00000024521	protein_coding	Pmaip1	ENSMUST00000237161	protein_coding	alternative1	18	1	66458575	2534
ENSMUSG00000022340	protein_coding	Sybu	ENSMUST00000226214	nonsense_mediated_decay		15	-1	44788063	2923
ENSMUSG00000059820	protein_coding	Nkapd1	ENSMUST00000147671	protein_coding		9	-1	50617264	1225
ENSMUSG00000024521	protein_coding	Pmaip1	ENSMUST00000236933	protein_coding		18	1	66458593	1012
ENSMUSG00000037851	protein_coding	Iars	ENSMUST00000165316	protein_coding	principal1	13	1	49682100	4426
ENSMUSG00000009092	protein_coding	Derl3	ENSMUST00000218932	retained_intron		10	1	75893434	395
ENSMUSG00000110325	TEC	Gm45293	ENSMUST00000209754	TEC		8	1	91633079	1812
ENSMUSG00000090258	protein_coding	Churc1	ENSMUST00000126408	protein_coding		12	1	76765555	462
ENSMUSG00000059820	protein_coding	Nkapd1	ENSMUST00000171462	protein_coding	principal1	9	-1	50617464	3339
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000194041	retained_intron		1	1	158596978	760
ENSMUSG00000032462	protein_coding	Pik3cb	ENSMUST00000136965	nonsense_mediated_decay		9	-1	99139925	5045
ENSMUSG00000009092	protein_coding	Derl3	ENSMUST00000218718	retained_intron		10	1	75893434	579
ENSMUSG00000032462	protein_coding	Pik3cb	ENSMUST00000124723	protein_coding		9	-1	99140621	631
ENSMUSG00000112965	lincRNA	Gm34278	ENSMUST00000220534	lincRNA		13	-1	53700417	622
ENSMUSG00000037851	protein_coding	Iars	ENSMUST00000172254	protein_coding		13	1	49682191	401
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000194217	nonsense_mediated_decay		1	1	158657149	508
ENSMUSG00000020562	protein_coding	Efcab10	ENSMUST00000020878	protein_coding	principal1	12	1	33394854	673
ENSMUSG00000009092	protein_coding	Derl3	ENSMUST00000219994	retained_intron		10	1	75893622	774
ENSMUSG00000009092	protein_coding	Derl3	ENSMUST00000220190	retained_intron		10	1	75894574	604
ENSMUSG00000022340	protein_coding	Sybu	ENSMUST00000228057	protein_coding	alternative2	15	-1	44748672	3026
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000192821	protein_coding		1	1	158657297	756
ENSMUSG00000114143	lincRNA	Gm48548	ENSMUST00000221931	lincRNA		13	1	53776627	682
ENSMUSG00000037851	protein_coding	Iars	ENSMUST00000171510	nonsense_mediated_decay		13	1	49705806	504
ENSMUSG00000005566	protein_coding	Trim28	ENSMUST00000209577	processed_transcript		7	1	12999114	851
ENSMUSG00000101180	processed_pseudogene	Gm2914	ENSMUST00000186120	processed_pseudogene		1	-1	30794875	328
ENSMUSG00000024065	protein_coding	Ehd3	ENSMUST00000233212	retained_intron		17	1	73804134	3528
ENSMUSG00000026587	protein_coding	Astn1	ENSMUST00000194658	processed_transcript		1	1	158678794	808
ENSMUSG00000026065	protein_coding	Slc9a4	ENSMUST00000027233	protein_coding	principal1	1	1	40580081	3962
ENSMUSG00000033368	protein_coding	Trim69	ENSMUST00000036089	protein_coding	principal1	2	1	122160700	1758
ENSMUSG00000022340	protein_coding	Sybu	ENSMUST00000226825	processed_transcript		15	-1	44747788	2445
ENSMUSG00000101664	unprocessed_pseudogene	Mrgpra14	ENSMUST00000189782	unprocessed_pseudogene		7	-1	47556288	913
ENSMUSG00000020372	protein_coding	Rack1	ENSMUST00000142269	retained_intron		11	1	48800332	4456
ENSMUSG00000022243	protein_coding	Slc45a2	ENSMUST00000117100	protein_coding	principal1	15	1	11000721	2983
ENSMUSG00000022340	protein_coding	Sybu	ENSMUST00000228639	protein_coding		15	-1	44788063	4113
ENSMUSG00000026065	protein_coding	Slc9a4	ENSMUST00000192849	processed_transcript		1	1	40580204	1332
ENSMUSG00000037851	protein_coding	Iars	ENSMUST00000165063	retained_intron		13	1	49706557	787
ENSMUSG00000108916	processed_pseudogene	Gm18944	ENSMUST00000207672	processed_pseudogene		7	1	108203145	643
ENSMUSG00000022340	protein_coding	Sybu	ENSMUST00000110269	protein_coding	alternative2	15	-1	44788063	2920
ENSMUSG00000033368	protein_coding	Trim69	ENSMUST00000143088	processed_transcript		2	1	122160802	1783
ENSMUSG00000026065	protein_coding	Slc9a4	ENSMUST00000193371	processed_transcript		1	1	40600602	342
ENSMUSG00000037851	protein_coding	Iars	ENSMUST00000164275	retained_intron		13	1	49708216	889
ENSMUSG00000054945	bidirectional_promoter_lncRNA	Gm9958	ENSMUST00000238484	bidirectional_promoter_lncRNA		5	1	90366620	1869
ENSMUSG00000026065	protein_coding	Slc9a4	ENSMUST00000192454	retained_intron		1	1	40628968	1449
ENSMUSG00000086587	antisense	Gm11837	ENSMUST00000137532	antisense		4	1	14929908	761
ENSMUSG00000054945	bidirectional_promoter_lncRNA	Gm9958	ENSMUST00000068250	bidirectional_promoter_lncRNA		5	1	90367204	1284
ENSMUSG00000095929	protein_coding	Olfr487	ENSMUST00000216489	protein_coding	principal1	7	-1	108214636	3785
ENSMUSG00000099659	unprocessed_pseudogene	Gm9322	ENSMUST00000188144	unprocessed_pseudogene		7	-1	47566278	958
ENSMUSG00000029923	protein_coding	Rab19	ENSMUST00000031986	protein_coding	principal1	6	1	39381175	1575
ENSMUSG00000086587	antisense	Gm11837	ENSMUST00000136992	antisense		4	1	14930661	876
ENSMUSG00000095929	protein_coding	Olfr487	ENSMUST00000081996	protein_coding	principal1	7	-1	108212527	945
ENSMUSG00000037851	protein_coding	Iars	ENSMUST00000165270	retained_intron		13	1	49717856	742
ENSMUSG00000037171	protein_coding	Nodal	ENSMUST00000049339	protein_coding	principal1	10	1	61417972	2095
ENSMUSG00000086587	antisense	Gm11837	ENSMUST00000152024	antisense		4	1	14930676	740
ENSMUSG00000020372	protein_coding	Rack1	ENSMUST00000139959	processed_transcript		11	1	48800357	1542
ENSMUSG00000060530	transcribed_processed_pseudogene	A930017M01Rik	ENSMUST00000227721	processed_transcript		15	1	44752280	4167
ENSMUSG00000106725	TEC	Gm43363	ENSMUST00000201590	TEC		5	1	90397273	2647
ENSMUSG00000099377	processed_pseudogene	Gm6159	ENSMUST00000191249	processed_pseudogene		1	-1	78784859	1724
ENSMUSG00000118138	lincRNA	Gm50322	ENSMUST00000235839	lincRNA		19	-1	9868995	4072
ENSMUSG00000037851	protein_coding	Iars	ENSMUST00000165656	retained_intron		13	1	49722119	356
ENSMUSG00000060530	transcribed_processed_pseudogene	A930017M01Rik	ENSMUST00000227659	processed_transcript		15	1	44752284	1520
ENSMUSG00000037851	protein_coding	Iars	ENSMUST00000164260	protein_coding	principal1	13	1	49687393	3789
ENSMUSG00000087241	antisense	Gm11844	ENSMUST00000129207	antisense		4	1	15022582	459
ENSMUSG00000117884	processed_pseudogene	Gm50156	ENSMUST00000235885	processed_pseudogene		18	-1	66491871	288
ENSMUSG00000118056	lincRNA	Gm30093	ENSMUST00000236681	lincRNA		18	1	38023529	381
ENSMUSG00000114012	processed_pseudogene	Gm18974	ENSMUST00000221478	processed_pseudogene		13	1	53888627	1031
ENSMUSG00000037851	protein_coding	Iars	ENSMUST00000047363	protein_coding	principal1	13	1	49682130	4396
ENSMUSG00000112094	unprocessed_pseudogene	Gm47506	ENSMUST00000219139	unprocessed_pseudogene		12	-1	33404775	714
ENSMUSG00000027115	protein_coding	Kif18a	ENSMUST00000028527	protein_coding	principal1	2	1	109280738	3369
ENSMUSG00000114069	processed_transcript	E130119H09Rik	ENSMUST00000223176	processed_transcript		13	-1	53915748	978
ENSMUSG00000043144	protein_coding	Aqp6	ENSMUST00000230075	protein_coding	alternative2	15	1	99601400	1427
ENSMUSG00000112656	unprocessed_pseudogene	Gm47929	ENSMUST00000217937	unprocessed_pseudogene		10	1	33714892	496
ENSMUSG00000078698	protein_coding	Mrgpra3	ENSMUST00000176369	protein_coding	principal1	7	-1	47601372	1295
ENSMUSG00000060530	transcribed_processed_pseudogene	A930017M01Rik	ENSMUST00000181839	processed_transcript		15	1	44787769	854
ENSMUSG00000073028	IG_V_gene	Igkv4-71	ENSMUST00000196201	IG_V_gene		6	-1	69243688	352
ENSMUSG00000104834	processed_pseudogene	Gm8861	ENSMUST00000196346	processed_pseudogene		5	1	10957406	832
ENSMUSG00000073028	IG_V_gene	Igkv4-71	ENSMUST00000101325	protein_coding	principal1	6	-1	69243445	288
ENSMUSG00000060802	protein_coding	B2m	ENSMUST00000102476	protein_coding	principal1	2	1	122147686	860
ENSMUSG00000024065	protein_coding	Ehd3	ENSMUST00000024860	protein_coding	principal1	17	1	73804841	3659
ENSMUSG00000060530	transcribed_processed_pseudogene	A930017M01Rik	ENSMUST00000227560	processed_transcript		15	1	44787784	379
ENSMUSG00000105978	lincRNA	Gm43492	ENSMUST00000199522	lincRNA		5	-1	11038939	786
ENSMUSG00000100665	unprocessed_pseudogene	Mrgprc1-ps	ENSMUST00000185552	unprocessed_pseudogene		7	-1	47612340	952
ENSMUSG00000060530	transcribed_processed_pseudogene	A930017M01Rik	ENSMUST00000081361	transcribed_processed_pseudogene		15	1	44881419	2884
ENSMUSG00000021095	protein_coding	Gsc	ENSMUST00000021513	protein_coding	principal1	12	-1	104473330	1268
ENSMUSG00000101087	unprocessed_pseudogene	Gm2707	ENSMUST00000188979	unprocessed_pseudogene		7	-1	47668808	714
ENSMUSG00000076547	IG_V_gene	Igkv4-70	ENSMUST00000103348	IG_V_gene	principal1	6	-1	69268443	379
ENSMUSG00000032036	protein_coding	Kirrel3	ENSMUST00000184203	protein_coding		9	1	34485894	746
ENSMUSG00000043144	protein_coding	Aqp6	ENSMUST00000023754	protein_coding	principal2	15	1	99601400	2060
ENSMUSG00000090298	protein_coding	Sult3a2	ENSMUST00000223295	protein_coding	principal1	10	-1	33786704	930
ENSMUSG00000091933	protein_coding	Gm8857	ENSMUST00000170064	protein_coding	principal1	5	1	10947807	1102
ENSMUSG00000101498	processed_pseudogene	Gm2950	ENSMUST00000185530	processed_pseudogene		9	-1	99220567	520
ENSMUSG00000076548	IG_V_gene	Igkv4-69	ENSMUST00000103349	IG_V_gene	principal1	6	-1	69284319	348
ENSMUSG00000090298	protein_coding	Sult3a2	ENSMUST00000165904	protein_coding	principal1	10	-1	33782115	882
ENSMUSG00000032036	protein_coding	Kirrel3	ENSMUST00000183580	processed_transcript		9	1	34486125	1334
ENSMUSG00000110577	TEC	1700112L15Rik	ENSMUST00000212067	TEC		8	1	95551793	510
ENSMUSG00000108011	protein_coding	Gm44596	ENSMUST00000204223	protein_coding	principal1	6	1	128375503	647
ENSMUSG00000108176	TEC	Gm43965	ENSMUST00000203779	TEC		6	1	128376981	789
ENSMUSG00000096316	protein_coding	Faiml	ENSMUST00000188555	protein_coding	principal1	9	-1	99236370	560
ENSMUSG00000026317	protein_coding	Cln8	ENSMUST00000132001	protein_coding		8	1	14881335	671
ENSMUSG00000033579	protein_coding	Fa2h	ENSMUST00000038475	protein_coding	principal1	8	-1	111393824	2492
ENSMUSG00000026361	protein_coding	Cdc73	ENSMUST00000018337	protein_coding	principal1	1	-1	143702893	11586
ENSMUSG00000024800	protein_coding	Rpp30	ENSMUST00000237251	retained_intron		19	1	36083716	1634
ENSMUSG00000026317	protein_coding	Cln8	ENSMUST00000123990	protein_coding		8	1	14888045	520
ENSMUSG00000058254	protein_coding	Tspan7	ENSMUST00000076354	protein_coding	principal1	X	1	10485158	1733
ENSMUSG00000095710	protein_coding	Gm8871	ENSMUST00000163544	protein_coding	principal5	5	1	11040115	1125
ENSMUSG00000096316	protein_coding	Faiml	ENSMUST00000178051	protein_coding	principal1	9	-1	99237239	785
ENSMUSG00000024309	protein_coding	Pfdn6	ENSMUST00000025163	protein_coding	principal2	17	-1	33940343	807
ENSMUSG00000095710	protein_coding	Gm8871	ENSMUST00000168945	protein_coding	alternative2	5	1	10947805	549
ENSMUSG00000058254	protein_coding	Tspan7	ENSMUST00000115526	protein_coding		X	1	10485158	7067
ENSMUSG00000117744	protein_coding	Vmn1r59	ENSMUST00000237385	processed_transcript		7	-1	5455740	1048
ENSMUSG00000117744	protein_coding	Vmn1r59	ENSMUST00000236678	processed_transcript		7	-1	5456774	3134
ENSMUSG00000020519	protein_coding	Sap30l	ENSMUST00000020826	protein_coding	principal1	11	1	57801637	1151
ENSMUSG00000058254	protein_coding	Tspan7	ENSMUST00000149982	retained_intron		X	1	10485158	6792
ENSMUSG00000024309	protein_coding	Pfdn6	ENSMUST00000174048	protein_coding	principal2	17	-1	33940325	560
ENSMUSG00000033579	protein_coding	Fa2h	ENSMUST00000162463	retained_intron		8	-1	111393818	1566
ENSMUSG00000117744	protein_coding	Vmn1r59	ENSMUST00000074132	protein_coding	principal1	7	-1	5454759	933
ENSMUSG00000026361	protein_coding	Cdc73	ENSMUST00000162638	processed_transcript		1	-1	143640581	3134
ENSMUSG00000026361	protein_coding	Cdc73	ENSMUST00000188838	retained_intron		1	-1	143636577	2727
ENSMUSG00000033579	protein_coding	Fa2h	ENSMUST00000159336	processed_transcript		8	-1	111366477	1971
ENSMUSG00000026317	protein_coding	Cln8	ENSMUST00000027554	protein_coding	principal1	8	1	14888111	6857
ENSMUSG00000024309	protein_coding	Pfdn6	ENSMUST00000173363	retained_intron		17	-1	33940304	871
ENSMUSG00000039474	protein_coding	Wfs1	ENSMUST00000043964	protein_coding	principal2	5	-1	36989205	3787
ENSMUSG00000026361	protein_coding	Cdc73	ENSMUST00000189597	retained_intron		1	-1	143642525	3056
ENSMUSG00000020372	protein_coding	Rack1	ENSMUST00000020640	protein_coding	principal1	11	1	48800360	1447
ENSMUSG00000082592	processed_pseudogene	Gm12950	ENSMUST00000121683	processed_pseudogene		4	1	116448788	417
ENSMUSG00000025816	protein_coding	Sec61a2	ENSMUST00000102981	protein_coding	principal1	2	-1	5895432	2448
ENSMUSG00000033579	protein_coding	Fa2h	ENSMUST00000162216	processed_transcript		8	-1	111348057	933
ENSMUSG00000113982	lincRNA	Gm34557	ENSMUST00000223115	lincRNA		13	-1	53934788	375
ENSMUSG00000026361	protein_coding	Cdc73	ENSMUST00000212510	processed_transcript		1	-1	143702624	1047
ENSMUSG00000039474	protein_coding	Wfs1	ENSMUST00000166339	protein_coding	alternative2	5	-1	36988933	3284
ENSMUSG00000026317	protein_coding	Cln8	ENSMUST00000133578	protein_coding		8	1	14889004	462
ENSMUSG00000026361	protein_coding	Cdc73	ENSMUST00000159794	nonsense_mediated_decay		1	-1	143702200	479
ENSMUSG00000020372	protein_coding	Rack1	ENSMUST00000136703	retained_intron		11	1	48800374	766
ENSMUSG00000100647	lincRNA	Gm29027	ENSMUST00000187571	lincRNA		Y	-1	36797345	1495
ENSMUSG00000024309	protein_coding	Pfdn6	ENSMUST00000179418	protein_coding	principal2	17	-1	33940310	481
ENSMUSG00000025816	protein_coding	Sec61a2	ENSMUST00000193792	protein_coding		2	-1	5895334	2110
ENSMUSG00000027115	protein_coding	Kif18a	ENSMUST00000130137	retained_intron		2	1	109280826	1934
ENSMUSG00000026317	protein_coding	Cln8	ENSMUST00000128839	protein_coding		8	1	14889359	407
ENSMUSG00000039474	protein_coding	Wfs1	ENSMUST00000167937	nonsense_mediated_decay		5	-1	36976956	714
ENSMUSG00000033373	protein_coding	Fntb	ENSMUST00000041008	protein_coding		12	1	76837414	2613
ENSMUSG00000020372	protein_coding	Rack1	ENSMUST00000125166	processed_transcript		11	1	48803152	637
ENSMUSG00000025816	protein_coding	Sec61a2	ENSMUST00000132908	protein_coding		2	-1	5876460	601
ENSMUSG00000118376	lincRNA	Gm9926	ENSMUST00000236110	lincRNA		18	1	66504178	334
ENSMUSG00000020372	protein_coding	Rack1	ENSMUST00000136849	processed_transcript		11	1	48805448	322
ENSMUSG00000025816	protein_coding	Sec61a2	ENSMUST00000124859	processed_transcript		2	-1	5874796	676
ENSMUSG00000071343	processed_pseudogene	Gm10327	ENSMUST00000105222	processed_pseudogene		10	-1	33809498	1002
ENSMUSG00000024309	protein_coding	Pfdn6	ENSMUST00000174426	protein_coding	alternative2	17	-1	33940330	396
ENSMUSG00000100647	lincRNA	Gm29027	ENSMUST00000190559	lincRNA		Y	-1	36796893	619
ENSMUSG00000025816	protein_coding	Sec61a2	ENSMUST00000153240	processed_transcript		2	-1	5874290	473
ENSMUSG00000100647	lincRNA	Gm29027	ENSMUST00000185319	lincRNA		Y	-1	36796893	435
ENSMUSG00000118376	lincRNA	Gm9926	ENSMUST00000236935	lincRNA		18	1	66504178	4900
ENSMUSG00000024309	protein_coding	Pfdn6	ENSMUST00000173678	protein_coding		17	-1	33940331	685
ENSMUSG00000101815	lincRNA	Gm29028	ENSMUST00000186297	lincRNA		Y	1	36830541	2166
ENSMUSG00000025816	protein_coding	Sec61a2	ENSMUST00000124985	processed_transcript		2	-1	5877024	600
ENSMUSG00000033373	protein_coding	Fntb	ENSMUST00000137826	protein_coding	principal1	12	1	76765598	1442
ENSMUSG00000101538	unprocessed_pseudogene	Gm29029	ENSMUST00000190520	unprocessed_pseudogene		Y	1	36839776	696
ENSMUSG00000024800	protein_coding	Rpp30	ENSMUST00000025714	protein_coding	principal1	19	1	36083731	1145
ENSMUSG00000117603	antisense	Gm50037	ENSMUST00000234174	antisense		17	1	33939069	151
ENSMUSG00000025816	protein_coding	Sec61a2	ENSMUST00000132469	processed_transcript		2	-1	5877990	620
ENSMUSG00000036598	protein_coding	Ccdc113	ENSMUST00000041569	protein_coding	principal1	8	1	95534085	1288
ENSMUSG00000100983	unprocessed_pseudogene	Gm29030	ENSMUST00000190848	unprocessed_pseudogene		Y	1	36875792	615
ENSMUSG00000118376	lincRNA	Gm9926	ENSMUST00000236603	lincRNA		18	1	66504181	1410
ENSMUSG00000025816	protein_coding	Sec61a2	ENSMUST00000148745	processed_transcript		2	-1	5878371	766
ENSMUSG00000033849	protein_coding	B3galt2	ENSMUST00000038252	protein_coding	principal1	1	1	143640664	9288
ENSMUSG00000118376	lincRNA	Gm9926	ENSMUST00000235580	lincRNA		18	1	66509635	484
ENSMUSG00000025816	protein_coding	Sec61a2	ENSMUST00000026926	protein_coding		2	-1	5895319	756
ENSMUSG00000024800	protein_coding	Rpp30	ENSMUST00000236197	retained_intron		19	1	36083743	584
ENSMUSG00000100281	antisense	4930422M22Rik	ENSMUST00000191492	antisense		9	-1	99304675	948
ENSMUSG00000027233	protein_coding	Patl2	ENSMUST00000028665	protein_coding	principal1	2	-1	122186189	2434
ENSMUSG00000103638	TEC	Gm38327	ENSMUST00000195852	TEC		9	-1	99243605	1755
ENSMUSG00000033373	protein_coding	Fntb	ENSMUST00000123887	processed_transcript		12	1	76840295	430
ENSMUSG00000024800	protein_coding	Rpp30	ENSMUST00000237841	retained_intron		19	1	36083790	1871
ENSMUSG00000027115	protein_coding	Kif18a	ENSMUST00000151395	retained_intron		2	1	109280840	2176
ENSMUSG00000089722	protein_coding	Cd300ld5	ENSMUST00000100239	protein_coding	principal1	11	-1	115037769	852
ENSMUSG00000113882	lincRNA	Gm48550	ENSMUST00000222780	lincRNA		13	1	53968944	2452
ENSMUSG00000074220	protein_coding	Zfp382	ENSMUST00000098596	protein_coding	principal1	7	1	30121942	2117
ENSMUSG00000025816	protein_coding	Sec61a2	ENSMUST00000194565	retained_intron		2	-1	5895334	1303
ENSMUSG00000111383	processed_pseudogene	Gm18914	ENSMUST00000214625	processed_pseudogene		9	-1	99261560	616
ENSMUSG00000024800	protein_coding	Rpp30	ENSMUST00000235223	processed_transcript		19	1	36100161	370
ENSMUSG00000110518	unprocessed_pseudogene	Olfr861-ps1	ENSMUST00000212783	unprocessed_pseudogene		9	1	19875510	928
ENSMUSG00000056718	protein_coding	Gm13199	ENSMUST00000142918	processed_transcript		2	-1	5862934	617
ENSMUSG00000027115	protein_coding	Kif18a	ENSMUST00000144924	retained_intron		2	1	109280852	1965
ENSMUSG00000114196	antisense	Gm47547	ENSMUST00000224095	antisense		14	1	41053653	2713
ENSMUSG00000027115	protein_coding	Kif18a	ENSMUST00000152751	retained_intron		2	1	109280869	6509
ENSMUSG00000111651	processed_pseudogene	Gm47199	ENSMUST00000214024	processed_pseudogene		9	-1	99260207	733
ENSMUSG00000074220	protein_coding	Zfp382	ENSMUST00000153792	protein_coding		7	1	30121970	325
ENSMUSG00000043122	protein_coding	A530016L24Rik	ENSMUST00000057465	protein_coding	principal1	12	1	112489448	2636
ENSMUSG00000112229	sense_intronic	Gm48086	ENSMUST00000220281	sense_intronic		10	-1	61450717	2142
ENSMUSG00000076549	IG_V_gene	Igkv4-68	ENSMUST00000103350	IG_V_gene	principal1	6	-1	69305405	394
ENSMUSG00000027115	protein_coding	Kif18a	ENSMUST00000162515	retained_intron		2	1	109292023	1380
ENSMUSG00000063842	protein_coding	Olfr862	ENSMUST00000079660	protein_coding	principal1	9	-1	19888004	2604
ENSMUSG00000043122	protein_coding	A530016L24Rik	ENSMUST00000223266	protein_coding		12	1	112489474	1547
ENSMUSG00000074220	protein_coding	Zfp382	ENSMUST00000156543	retained_intron		7	1	30125615	730
ENSMUSG00000033373	protein_coding	Fntb	ENSMUST00000154743	processed_transcript		12	1	76887058	829
ENSMUSG00000056718	protein_coding	Gm13199	ENSMUST00000071016	protein_coding	principal1	2	-1	5862923	747
ENSMUSG00000063842	protein_coding	Olfr862	ENSMUST00000073765	protein_coding	principal1	9	-1	19884343	1035
ENSMUSG00000104697	IG_V_pseudogene	Igkv12-67	ENSMUST00000197806	IG_V_pseudogene		6	-1	69324652	354
ENSMUSG00000033373	protein_coding	Fntb	ENSMUST00000136939	processed_transcript		12	1	76909486	391
ENSMUSG00000069668	protein_coding	Sult3a1	ENSMUST00000218204	protein_coding	principal1	10	1	33857721	1154
ENSMUSG00000106222	lincRNA	Rprl1	ENSMUST00000198476	lincRNA		6	-1	69327174	238
ENSMUSG00000033373	protein_coding	Fntb	ENSMUST00000130605	retained_intron		12	1	76909992	384
ENSMUSG00000033373	protein_coding	Fntb	ENSMUST00000125842	nonsense_mediated_decay		12	1	76765589	1808
ENSMUSG00000033373	protein_coding	Fntb	ENSMUST00000151864	processed_transcript		12	1	76837433	370
ENSMUSG00000069607	protein_coding	Cd300ld3	ENSMUST00000092459	protein_coding	principal1	11	-1	115048409	852
ENSMUSG00000021791	protein_coding	Dydc2	ENSMUST00000022316	protein_coding	principal1	14	-1	41069208	818
ENSMUSG00000101199	processed_pseudogene	Gm9687	ENSMUST00000189312	processed_pseudogene		1	1	150145968	602
ENSMUSG00000034833	protein_coding	Tespa1	ENSMUST00000219450	retained_intron		10	1	130322870	2311
ENSMUSG00000069668	protein_coding	Sult3a1	ENSMUST00000092597	protein_coding	principal1	10	1	33863935	1047
ENSMUSG00000112447	processed_pseudogene	Gm47935	ENSMUST00000217760	processed_pseudogene		10	-1	33873018	385
ENSMUSG00000037580	protein_coding	Gch1	ENSMUST00000089959	protein_coding	principal1	14	-1	47189413	2775
ENSMUSG00000036002	protein_coding	Fam214b	ENSMUST00000107958	protein_coding	principal1	4	-1	43040288	3280
ENSMUSG00000020091	protein_coding	Eif4ebp2	ENSMUST00000020288	protein_coding	principal1	10	-1	61452661	5784
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000059580	protein_coding	principal3	5	1	124439930	2739
ENSMUSG00000037580	protein_coding	Gch1	ENSMUST00000227883	retained_intron		14	-1	47161872	3508
ENSMUSG00000029247	protein_coding	Paics	ENSMUST00000031160	protein_coding	principal1	5	1	76951307	2482
ENSMUSG00000036002	protein_coding	Fam214b	ENSMUST00000107959	protein_coding	principal1	4	-1	43040291	3060
ENSMUSG00000115098	processed_pseudogene	Gm49134	ENSMUST00000226396	processed_pseudogene		14	1	47162377	258
ENSMUSG00000115764	processed_pseudogene	Gm18811	ENSMUST00000226918	processed_pseudogene		14	-1	47178546	664
ENSMUSG00000020091	protein_coding	Eif4ebp2	ENSMUST00000167087	protein_coding	principal1	10	-1	61452658	1422
ENSMUSG00000026116	protein_coding	Tmem131	ENSMUST00000194563	protein_coding	principal1	1	-1	36939822	6698
ENSMUSG00000036002	protein_coding	Fam214b	ENSMUST00000107956	protein_coding	principal1	4	-1	43045797	3107
ENSMUSG00000117918	processed_pseudogene	Gm50157	ENSMUST00000236080	processed_pseudogene		18	-1	66517352	357
ENSMUSG00000118148	processed_pseudogene	Gm50158	ENSMUST00000238141	processed_pseudogene		18	1	66549013	92
ENSMUSG00000057234	protein_coding	Mettl15	ENSMUST00000081631	protein_coding	principal1	2	-1	109278290	1894
ENSMUSG00000036002	protein_coding	Fam214b	ENSMUST00000107957	protein_coding	principal1	4	-1	43045825	3234
ENSMUSG00000040365	protein_coding	Trim41	ENSMUST00000047145	protein_coding	principal1	11	-1	48817353	3432
ENSMUSG00000026116	protein_coding	Tmem131	ENSMUST00000191381	retained_intron		1	-1	36816586	3969
ENSMUSG00000044276	antisense	4933427E11Rik	ENSMUST00000185751	antisense		15	1	74709161	1212
ENSMUSG00000040365	protein_coding	Trim41	ENSMUST00000131888	protein_coding		11	-1	48812395	429
ENSMUSG00000027273	protein_coding	Snap25	ENSMUST00000028727	protein_coding	principal3	2	1	136713453	2116
ENSMUSG00000044276	antisense	4933427E11Rik	ENSMUST00000056711	antisense		15	1	74709161	1214
ENSMUSG00000026116	protein_coding	Tmem131	ENSMUST00000187917	retained_intron		1	-1	36810536	703
ENSMUSG00000036002	protein_coding	Fam214b	ENSMUST00000036462	protein_coding	principal1	4	-1	43046220	3074
ENSMUSG00000026116	protein_coding	Tmem131	ENSMUST00000189470	protein_coding		1	-1	36818761	696
ENSMUSG00000040365	protein_coding	Trim41	ENSMUST00000140800	protein_coding		11	-1	48816953	723
ENSMUSG00000048498	protein_coding	Cd300e	ENSMUST00000062787	protein_coding	principal1	11	-1	115062177	2088
ENSMUSG00000021478	protein_coding	Drd1	ENSMUST00000221470	protein_coding	alternative2	13	-1	54055705	3576
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000151314	nonsense_mediated_decay		14	-1	55106534	3031
ENSMUSG00000040365	protein_coding	Trim41	ENSMUST00000138019	protein_coding		11	-1	48816231	471
ENSMUSG00000026116	protein_coding	Tmem131	ENSMUST00000190442	protein_coding		1	-1	36819152	515
ENSMUSG00000029247	protein_coding	Paics	ENSMUST00000120912	protein_coding	principal1	5	1	76951348	2345
ENSMUSG00000021478	protein_coding	Drd1	ENSMUST00000222706	processed_transcript		13	-1	54054780	405
ENSMUSG00000029247	protein_coding	Paics	ENSMUST00000117536	protein_coding	principal1	5	1	76951368	1862
ENSMUSG00000021790	protein_coding	Dydc1	ENSMUST00000161837	protein_coding	alternative2	14	1	41072940	829
ENSMUSG00000057234	protein_coding	Mettl15	ENSMUST00000147376	processed_transcript		2	-1	109278280	2018
ENSMUSG00000114546	lincRNA	Gm49350	ENSMUST00000224246	lincRNA		13	-1	37686425	272
ENSMUSG00000026116	protein_coding	Tmem131	ENSMUST00000186486	nonsense_mediated_decay		1	-1	36824781	682
ENSMUSG00000036002	protein_coding	Fam214b	ENSMUST00000135067	nonsense_mediated_decay		4	-1	43046220	3015
ENSMUSG00000021478	protein_coding	Drd1	ENSMUST00000021932	protein_coding	principal2	13	-1	54055658	3526
ENSMUSG00000097754	lincRNA	Ptgs2os2	ENSMUST00000181308	lincRNA		1	-1	150164948	1745
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000139536	retained_intron		14	-1	55099388	461
ENSMUSG00000029247	protein_coding	Paics	ENSMUST00000141687	protein_coding		5	1	76951382	422
ENSMUSG00000057234	protein_coding	Mettl15	ENSMUST00000138533	retained_intron		2	-1	109280726	646
ENSMUSG00000049303	protein_coding	Syt12	ENSMUST00000059295	protein_coding	principal1	19	-1	4477447	3581
ENSMUSG00000046380	protein_coding	Jrk	ENSMUST00000050234	protein_coding	principal1	15	-1	74709535	5853
ENSMUSG00000057234	protein_coding	Mettl15	ENSMUST00000147770	protein_coding		2	-1	109280748	848
ENSMUSG00000118187	processed_pseudogene	Gm36092	ENSMUST00000237927	processed_pseudogene		18	-1	66561931	317
ENSMUSG00000099875	processed_pseudogene	Rbm3-ps	ENSMUST00000121422	processed_pseudogene		1	-1	150265999	465
ENSMUSG00000026116	protein_coding	Tmem131	ENSMUST00000185964	protein_coding		1	-1	36943666	591
ENSMUSG00000027770	protein_coding	Dhx36	ENSMUST00000029336	protein_coding	principal1	3	-1	62507004	5620
ENSMUSG00000115566	processed_pseudogene	Gm49136	ENSMUST00000228847	processed_pseudogene		14	1	47199870	251
ENSMUSG00000036002	protein_coding	Fam214b	ENSMUST00000152846	protein_coding		4	-1	43040295	756
ENSMUSG00000057234	protein_coding	Mettl15	ENSMUST00000145535	processed_transcript		2	-1	109280702	530
ENSMUSG00000100690	processed_pseudogene	Gm4322	ENSMUST00000191094	processed_pseudogene		1	-1	150269261	336
ENSMUSG00000049303	protein_coding	Syt12	ENSMUST00000128114	processed_transcript		19	-1	4452151	355
ENSMUSG00000115400	processed_pseudogene	Gm49137	ENSMUST00000228694	processed_pseudogene		14	-1	47214738	604
ENSMUSG00000027273	protein_coding	Snap25	ENSMUST00000110098	protein_coding	alternative1	2	1	136713478	1014
ENSMUSG00000036002	protein_coding	Fam214b	ENSMUST00000124155	protein_coding		4	-1	43037301	444
ENSMUSG00000026116	protein_coding	Tmem131	ENSMUST00000027290	protein_coding	principal1	1	-1	36939527	6546
ENSMUSG00000114732	lincRNA	Gm40918	ENSMUST00000225448	lincRNA		13	-1	37717648	560
ENSMUSG00000036002	protein_coding	Fam214b	ENSMUST00000144999	protein_coding		4	-1	43039331	345
ENSMUSG00000029247	protein_coding	Paics	ENSMUST00000153648	nonsense_mediated_decay		5	1	76951777	886
ENSMUSG00000049303	protein_coding	Syt12	ENSMUST00000166191	processed_transcript		19	-1	4477126	445
ENSMUSG00000068200	processed_pseudogene	Gm5931	ENSMUST00000121308	processed_pseudogene		X	1	10660522	477
ENSMUSG00000027770	protein_coding	Dhx36	ENSMUST00000160858	retained_intron		3	-1	62472587	845
ENSMUSG00000114732	lincRNA	Gm40918	ENSMUST00000224732	lincRNA		13	-1	37716311	385
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000131323	nonsense_mediated_decay		14	-1	55106267	2648
ENSMUSG00000103016	TEC	Gm37506	ENSMUST00000192008	TEC		1	-1	36872045	143
ENSMUSG00000049303	protein_coding	Syt12	ENSMUST00000133222	retained_intron		19	-1	4477156	2131
ENSMUSG00000029247	protein_coding	Paics	ENSMUST00000140051	retained_intron		5	1	76961476	575
ENSMUSG00000114259	processed_pseudogene	Gm49351	ENSMUST00000224828	processed_pseudogene		13	-1	37698158	853
ENSMUSG00000021790	protein_coding	Dydc1	ENSMUST00000022315	nonsense_mediated_decay		14	1	41072911	988
ENSMUSG00000036002	protein_coding	Fam214b	ENSMUST00000140998	processed_transcript		4	-1	43045759	342
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000127870	nonsense_mediated_decay		14	-1	55106548	2551
ENSMUSG00000021790	protein_coding	Dydc1	ENSMUST00000189865	protein_coding	principal2	14	1	41072911	995
ENSMUSG00000029247	protein_coding	Paics	ENSMUST00000154688	retained_intron		5	1	76966157	443
ENSMUSG00000103159	TEC	F830112A20Rik	ENSMUST00000194249	TEC		1	-1	36926348	3552
ENSMUSG00000027770	protein_coding	Dhx36	ENSMUST00000162070	retained_intron		3	-1	62488625	702
ENSMUSG00000096974	antisense	Gm26881	ENSMUST00000209785	antisense		4	1	43045966	551
ENSMUSG00000028167	protein_coding	Bdh2	ENSMUST00000120397	protein_coding		3	1	135281221	1172
ENSMUSG00000102930	sense_intronic	Gm38115	ENSMUST00000194317	sense_intronic		1	-1	36916539	2413
ENSMUSG00000072852	transcribed_unprocessed_pseudogene	2310040G07Rik	ENSMUST00000101090	transcribed_unprocessed_pseudogene		5	1	76928372	549
ENSMUSG00000027770	protein_coding	Dhx36	ENSMUST00000192223	retained_intron		3	-1	62502133	4201
ENSMUSG00000096974	antisense	Gm26881	ENSMUST00000180426	antisense		4	1	43046034	593
ENSMUSG00000072852	transcribed_unprocessed_pseudogene	2310040G07Rik	ENSMUST00000145897	processed_transcript		5	1	76928608	462
ENSMUSG00000027273	protein_coding	Snap25	ENSMUST00000125486	retained_intron		2	1	136713454	4880
ENSMUSG00000096974	antisense	Gm26881	ENSMUST00000211208	antisense		4	1	43046042	551
ENSMUSG00000082849	processed_pseudogene	Gm14053	ENSMUST00000121662	processed_pseudogene		2	-1	136744615	470
ENSMUSG00000051375	protein_coding	Pcdh1	ENSMUST00000160721	protein_coding		18	-1	38212053	5416
ENSMUSG00000087441	lincRNA	Gm13853	ENSMUST00000155496	lincRNA		6	-1	33992411	557
ENSMUSG00000028167	protein_coding	Bdh2	ENSMUST00000029817	protein_coding	principal1	3	1	135281261	1059
ENSMUSG00000037335	protein_coding	Hand1	ENSMUST00000036917	protein_coding	principal1	11	-1	57832147	1904
ENSMUSG00000028167	protein_coding	Bdh2	ENSMUST00000198491	retained_intron		3	1	135281283	3134
ENSMUSG00000022598	protein_coding	Psca	ENSMUST00000023265	protein_coding	principal1	15	1	74714839	860
ENSMUSG00000020948	protein_coding	Klhl28	ENSMUST00000222508	protein_coding	principal1	12	-1	64965534	6459
ENSMUSG00000037335	protein_coding	Hand1	ENSMUST00000108845	protein_coding		11	-1	57832818	354
ENSMUSG00000023066	protein_coding	Rttn	ENSMUST00000023828	protein_coding	principal1	18	1	88971790	7271
ENSMUSG00000051375	protein_coding	Pcdh1	ENSMUST00000161701	protein_coding		18	-1	38203163	3889
ENSMUSG00000020948	protein_coding	Klhl28	ENSMUST00000021331	protein_coding	principal1	12	-1	64963370	2024
ENSMUSG00000083262	processed_pseudogene	Gm14470	ENSMUST00000119085	processed_pseudogene		X	1	10680964	466
ENSMUSG00000101983	processed_pseudogene	Gm28976	ENSMUST00000188070	processed_pseudogene		15	1	74718792	144
ENSMUSG00000028167	protein_coding	Bdh2	ENSMUST00000154869	processed_transcript		3	1	135288658	819
ENSMUSG00000037335	protein_coding	Hand1	ENSMUST00000160392	protein_coding	principal1	11	-1	57832818	1806
ENSMUSG00000001518	protein_coding	Itfg2	ENSMUST00000001559	protein_coding	principal1	6	-1	128424931	2320
ENSMUSG00000081308	processed_pseudogene	Gm14480	ENSMUST00000118521	processed_pseudogene		X	-1	10697364	433
ENSMUSG00000020948	protein_coding	Klhl28	ENSMUST00000221957	retained_intron		12	-1	64965513	1732
ENSMUSG00000024803	protein_coding	Ankrd1	ENSMUST00000236579	nonsense_mediated_decay		19	-1	36119910	1920
ENSMUSG00000117843	processed_pseudogene	Gm50159	ENSMUST00000236897	processed_pseudogene		18	-1	66606420	688
ENSMUSG00000024803	protein_coding	Ankrd1	ENSMUST00000235941	nonsense_mediated_decay		19	-1	36119910	1833
ENSMUSG00000005566	protein_coding	Trim28	ENSMUST00000005705	protein_coding	principal1	7	1	13024152	3245
ENSMUSG00000001518	protein_coding	Itfg2	ENSMUST00000203984	protein_coding		6	-1	128410380	338
ENSMUSG00000118349	processed_pseudogene	Gm50160	ENSMUST00000236048	processed_pseudogene		18	-1	66621633	205
ENSMUSG00000001518	protein_coding	Itfg2	ENSMUST00000142615	protein_coding		6	-1	128424918	3191
ENSMUSG00000001518	protein_coding	Itfg2	ENSMUST00000203374	protein_coding		6	-1	128424869	1394
ENSMUSG00000001518	protein_coding	Itfg2	ENSMUST00000204362	retained_intron		6	-1	128410685	353
ENSMUSG00000054641	protein_coding	Mmrn1	ENSMUST00000145763	retained_intron		6	1	60924976	2054
ENSMUSG00000024803	protein_coding	Ankrd1	ENSMUST00000237142	protein_coding	principal1	19	-1	36120099	2020
ENSMUSG00000041845	protein_coding	Rhod	ENSMUST00000048197	protein_coding	principal1	19	-1	4439432	1344
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000199798	nonsense_mediated_decay		5	1	124439967	1789
ENSMUSG00000024803	protein_coding	Ankrd1	ENSMUST00000025718	protein_coding		19	-1	36119910	1818
ENSMUSG00000024803	protein_coding	Ankrd1	ENSMUST00000237338	nonsense_mediated_decay		19	-1	36119910	1843
ENSMUSG00000041845	protein_coding	Rhod	ENSMUST00000235680	protein_coding		19	-1	4439400	1151
ENSMUSG00000034833	protein_coding	Tespa1	ENSMUST00000217702	protein_coding		10	1	130322877	1102
ENSMUSG00000029246	protein_coding	Ppat	ENSMUST00000155272	nonsense_mediated_decay		5	-1	76951572	4158
ENSMUSG00000024803	protein_coding	Ankrd1	ENSMUST00000235221	retained_intron		19	-1	36119910	1740
ENSMUSG00000112255	TEC	Gm47594	ENSMUST00000219114	TEC		10	1	61570911	4154
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000196860	retained_intron		5	1	124439985	1271
ENSMUSG00000051375	protein_coding	Pcdh1	ENSMUST00000057185	protein_coding	principal1	18	-1	38209762	3902
ENSMUSG00000041845	protein_coding	Rhod	ENSMUST00000117462	protein_coding		19	-1	4439421	1495
ENSMUSG00000001518	protein_coding	Itfg2	ENSMUST00000203195	retained_intron		6	-1	128414377	723
ENSMUSG00000112080	antisense	Gm47595	ENSMUST00000220313	antisense		10	-1	61496290	392
ENSMUSG00000048731	protein_coding	Ggnbp1	ENSMUST00000142141	protein_coding		17	1	27017987	451
ENSMUSG00000041845	protein_coding	Rhod	ENSMUST00000151420	processed_transcript		19	-1	4426555	109
ENSMUSG00000112058	antisense	Gm47593	ENSMUST00000220094	antisense		10	-1	61498097	723
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000100709	protein_coding		5	1	124445493	1425
ENSMUSG00000025817	protein_coding	Nudt5	ENSMUST00000026927	protein_coding	principal1	2	1	5845019	4764
ENSMUSG00000105110	IG_V_pseudogene	Igkv12-66	ENSMUST00000199305	IG_V_pseudogene		6	-1	69335076	348
ENSMUSG00000023066	protein_coding	Rttn	ENSMUST00000235272	retained_intron		18	1	88971808	3260
ENSMUSG00000034833	protein_coding	Tespa1	ENSMUST00000042586	protein_coding	principal1	10	1	130322878	1663
ENSMUSG00000023066	protein_coding	Rttn	ENSMUST00000235314	processed_transcript		18	1	88985894	363
ENSMUSG00000112058	antisense	Gm47593	ENSMUST00000219324	antisense		10	-1	61499601	649
ENSMUSG00000051375	protein_coding	Pcdh1	ENSMUST00000159405	protein_coding	principal1	18	-1	38211970	3880
ENSMUSG00000001518	protein_coding	Itfg2	ENSMUST00000203853	nonsense_mediated_decay		6	-1	128424912	724
ENSMUSG00000112058	antisense	Gm47593	ENSMUST00000217859	antisense		10	-1	61498844	384
ENSMUSG00000118398	processed_pseudogene	Gm19334	ENSMUST00000238441	processed_pseudogene		13	1	49750465	2152
ENSMUSG00000051375	protein_coding	Pcdh1	ENSMUST00000194312	protein_coding		18	-1	38203840	234
ENSMUSG00000005566	protein_coding	Trim28	ENSMUST00000142421	retained_intron		7	1	13025758	864
ENSMUSG00000051375	protein_coding	Pcdh1	ENSMUST00000193828	protein_coding		18	-1	38210554	434
ENSMUSG00000001518	protein_coding	Itfg2	ENSMUST00000203026	nonsense_mediated_decay		6	-1	128424913	655
ENSMUSG00000017733	protein_coding	Eppin	ENSMUST00000103100	protein_coding	principal1	2	-1	164593594	778
ENSMUSG00000113823	processed_pseudogene	Gm270	ENSMUST00000223010	processed_pseudogene		13	1	49764328	976
ENSMUSG00000089983	lincRNA	2010320O07Rik	ENSMUST00000160935	lincRNA		18	1	38209772	525
ENSMUSG00000034833	protein_coding	Tespa1	ENSMUST00000218605	protein_coding		10	1	130322879	412
ENSMUSG00000025817	protein_coding	Nudt5	ENSMUST00000138549	retained_intron		2	1	5845253	1677
ENSMUSG00000005566	protein_coding	Trim28	ENSMUST00000148354	retained_intron		7	1	13027744	608
ENSMUSG00000023066	protein_coding	Rttn	ENSMUST00000236531	retained_intron		18	1	89012972	2209
ENSMUSG00000025817	protein_coding	Nudt5	ENSMUST00000127116	protein_coding		2	1	5845253	743
ENSMUSG00000089983	lincRNA	2010320O07Rik	ENSMUST00000236988	lincRNA		18	1	38213704	503
ENSMUSG00000005566	protein_coding	Trim28	ENSMUST00000128951	retained_intron		7	1	13027942	1004
ENSMUSG00000001518	protein_coding	Itfg2	ENSMUST00000133994	retained_intron		6	-1	128424930	2296
ENSMUSG00000105883	IG_V_pseudogene	Igkv4-65	ENSMUST00000196986	IG_V_pseudogene		6	-1	69343004	358
ENSMUSG00000034833	protein_coding	Tespa1	ENSMUST00000218040	retained_intron		10	1	130322879	806
ENSMUSG00000001518	protein_coding	Itfg2	ENSMUST00000204467	retained_intron		6	-1	128424918	2135
ENSMUSG00000034833	protein_coding	Tespa1	ENSMUST00000220164	retained_intron		10	1	130328744	1732
ENSMUSG00000112534	processed_pseudogene	Gm47940	ENSMUST00000218877	processed_pseudogene		10	-1	33894256	164
ENSMUSG00000117257	processed_pseudogene	Gm4948	ENSMUST00000233573	processed_pseudogene		17	-1	73871350	920
ENSMUSG00000025817	protein_coding	Nudt5	ENSMUST00000194933	protein_coding		2	1	5845290	509
ENSMUSG00000117998	lincRNA	Gm32081	ENSMUST00000236660	lincRNA		19	1	36182580	475
ENSMUSG00000005566	protein_coding	Trim28	ENSMUST00000123603	retained_intron		7	1	13028125	767
ENSMUSG00000117990	processed_transcript	Gm32027	ENSMUST00000237468	processed_transcript		19	-1	36264437	3397
ENSMUSG00000087132	processed_transcript	A930001C03Rik	ENSMUST00000154407	antisense		19	1	4439003	1402
ENSMUSG00000117990	processed_transcript	Gm32027	ENSMUST00000236548	processed_transcript		19	-1	36264437	1249
ENSMUSG00000023066	protein_coding	Rttn	ENSMUST00000236313	nonsense_mediated_decay		18	1	89021686	615
ENSMUSG00000025817	protein_coding	Nudt5	ENSMUST00000128604	processed_transcript		2	1	5848135	436
ENSMUSG00000118032	lincRNA	Gm50147	ENSMUST00000236788	lincRNA		19	1	36251727	602
ENSMUSG00000087132	processed_transcript	A930001C03Rik	ENSMUST00000235289	antisense		19	1	4439323	1563
ENSMUSG00000087132	processed_transcript	A930001C03Rik	ENSMUST00000133871	antisense		19	1	4439559	984
ENSMUSG00000023066	protein_coding	Rttn	ENSMUST00000235882	processed_transcript		18	1	89035574	2123
ENSMUSG00000005566	protein_coding	Trim28	ENSMUST00000149061	retained_intron		7	1	13028772	783
ENSMUSG00000105747	IG_V_pseudogene	Igkv13-64	ENSMUST00000198143	IG_V_pseudogene		6	1	69362725	343
ENSMUSG00000023348	protein_coding	Trip6	ENSMUST00000024119	protein_coding	principal1	5	-1	137314404	2168
ENSMUSG00000037151	protein_coding	Lrrc20	ENSMUST00000049242	protein_coding	principal1	10	1	61475801	3216
ENSMUSG00000087132	processed_transcript	A930001C03Rik	ENSMUST00000132579	antisense		19	1	4443738	426
ENSMUSG00000023066	protein_coding	Rttn	ENSMUST00000235728	retained_intron		18	1	89046069	488
ENSMUSG00000025817	protein_coding	Nudt5	ENSMUST00000179748	protein_coding	principal1	2	1	5845034	1590
ENSMUSG00000087132	processed_transcript	A930001C03Rik	ENSMUST00000136632	retained_intron		19	1	4446813	1422
ENSMUSG00000005566	protein_coding	Trim28	ENSMUST00000125136	retained_intron		7	1	13029091	846
ENSMUSG00000023348	protein_coding	Trip6	ENSMUST00000199121	protein_coding		5	-1	137314190	366
ENSMUSG00000005566	protein_coding	Trim28	ENSMUST00000129122	retained_intron		7	1	13029704	562
ENSMUSG00000013846	protein_coding	St3gal1	ENSMUST00000229028	protein_coding	principal1	15	-1	67176830	5732
ENSMUSG00000076550	IG_V_gene	Igkv4-63	ENSMUST00000196595	IG_V_gene		6	-1	69378472	352
ENSMUSG00000102583	unprocessed_pseudogene	Gm37441	ENSMUST00000194430	unprocessed_pseudogene		Y	1	13569691	678
ENSMUSG00000101820	lincRNA	Gm29023	ENSMUST00000190543	lincRNA		Y	-1	36888946	325
ENSMUSG00000043126	antisense	D830039M14Rik	ENSMUST00000217740	antisense		10	-1	61476937	3362
ENSMUSG00000076550	IG_V_gene	Igkv4-63	ENSMUST00000103351	IG_V_gene	principal1	6	-1	69378229	286
ENSMUSG00000023348	protein_coding	Trip6	ENSMUST00000197816	retained_intron		5	-1	137314164	828
ENSMUSG00000043126	antisense	D830039M14Rik	ENSMUST00000051330	antisense		10	-1	61476937	1693
ENSMUSG00000108743	processed_pseudogene	Gm44881	ENSMUST00000205425	processed_pseudogene		7	1	4301348	367
ENSMUSG00000005566	protein_coding	Trim28	ENSMUST00000123778	retained_intron		7	1	13030372	565
ENSMUSG00000100283	unprocessed_pseudogene	Gm29024	ENSMUST00000189624	unprocessed_pseudogene		Y	1	36905314	696
ENSMUSG00000114859	antisense	Gm47735	ENSMUST00000225679	antisense		19	-1	36348298	685
ENSMUSG00000112710	processed_pseudogene	Gm17829	ENSMUST00000219782	processed_pseudogene		10	-1	61510585	344
ENSMUSG00000118201	lincRNA	Gm50161	ENSMUST00000235402	lincRNA		18	-1	66634599	395
ENSMUSG00000068601	antisense	Gm10244	ENSMUST00000156905	antisense		6	1	39419887	474
ENSMUSG00000105323	IG_V_pseudogene	Igkv13-62-1	ENSMUST00000198690	IG_V_pseudogene		6	1	69392424	317
ENSMUSG00000021062	protein_coding	Rab15	ENSMUST00000021459	protein_coding	principal1	12	-1	76822553	3158
ENSMUSG00000106477	processed_pseudogene	Gm8874	ENSMUST00000196826	processed_pseudogene		5	1	11050460	286
ENSMUSG00000112227	lincRNA	C330004P14Rik	ENSMUST00000218833	lincRNA		10	1	15791777	628
ENSMUSG00000023348	protein_coding	Trip6	ENSMUST00000199564	processed_transcript		5	-1	137314207	364
ENSMUSG00000117750	lincRNA	Gm30190	ENSMUST00000237763	lincRNA		18	-1	66674502	475
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000147969	processed_transcript		5	1	124445505	2112
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000134826	retained_intron		5	1	124445784	696
ENSMUSG00000104048	lincRNA	Gm37561	ENSMUST00000195221	lincRNA		Y	-1	13582258	368
ENSMUSG00000013846	protein_coding	St3gal1	ENSMUST00000229742	processed_transcript		15	-1	67176712	2626
ENSMUSG00000084223	processed_pseudogene	Gm12244	ENSMUST00000119500	processed_pseudogene		11	1	57880896	291
ENSMUSG00000104507	antisense	A430027H14Rik	ENSMUST00000191809	antisense		1	1	189343431	1467
ENSMUSG00000013846	protein_coding	St3gal1	ENSMUST00000229213	protein_coding	principal1	15	-1	67176780	2337
ENSMUSG00000099832	lincRNA	Gm29025	ENSMUST00000186756	lincRNA		Y	1	36935944	2163
ENSMUSG00000104404	unprocessed_pseudogene	Gm36728	ENSMUST00000195782	unprocessed_pseudogene		Y	1	13783494	665
ENSMUSG00000021062	protein_coding	Rab15	ENSMUST00000143863	retained_intron		12	-1	76800834	797
ENSMUSG00000112995	antisense	Gm47977	ENSMUST00000223523	antisense		13	1	49784981	555
ENSMUSG00000056267	protein_coding	Cep70	ENSMUST00000185799	protein_coding		9	1	99243367	740
ENSMUSG00000068601	antisense	Gm10244	ENSMUST00000090237	antisense		6	1	39420378	830
ENSMUSG00000013846	protein_coding	St3gal1	ENSMUST00000230150	processed_transcript		15	-1	67129023	350
ENSMUSG00000114073	protein_coding	Gm30302	ENSMUST00000220773	protein_coding	principal1	13	-1	49790243	3511
ENSMUSG00000071540	protein_coding	3425401B19Rik	ENSMUST00000096038	protein_coding	principal1	14	-1	32685272	5547
ENSMUSG00000104507	antisense	A430027H14Rik	ENSMUST00000192797	antisense		1	1	189343984	618
ENSMUSG00000106506	lincRNA	4930558F17Rik	ENSMUST00000197789	lincRNA		5	-1	11126455	786
ENSMUSG00000117737	lincRNA	Gm22219	ENSMUST00000236734	lincRNA		18	1	66674534	2063
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000138766	processed_transcript		5	1	124446704	731
ENSMUSG00000102799	unprocessed_pseudogene	Gm32295	ENSMUST00000192558	unprocessed_pseudogene		Y	-1	13874078	696
ENSMUSG00000117968	lincRNA	Gm50162	ENSMUST00000237489	lincRNA		18	1	66761132	1172
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000187144	processed_transcript		Y	-1	73348642	1134
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000154031	processed_transcript		5	1	124446962	903
ENSMUSG00000013846	protein_coding	St3gal1	ENSMUST00000092640	protein_coding	principal1	15	-1	67113992	4985
ENSMUSG00000021062	protein_coding	Rab15	ENSMUST00000122419	protein_coding		12	-1	76805478	856
ENSMUSG00000023066	protein_coding	Rttn	ENSMUST00000236676	nonsense_mediated_decay		18	1	89064214	2844
ENSMUSG00000083657	processed_pseudogene	Gm12245	ENSMUST00000117266	processed_pseudogene		11	-1	57949085	357
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000147692	processed_transcript		5	1	124447005	370
ENSMUSG00000071540	protein_coding	3425401B19Rik	ENSMUST00000226958	processed_transcript		14	-1	32685293	389
ENSMUSG00000114073	protein_coding	Gm30302	ENSMUST00000223497	protein_coding		13	-1	49798990	559
ENSMUSG00000023066	protein_coding	Rttn	ENSMUST00000237640	nonsense_mediated_decay		18	1	89101628	654
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000198451	protein_coding	alternative1	5	1	124447199	1032
ENSMUSG00000099563	processed_pseudogene	Gm19125	ENSMUST00000188408	processed_pseudogene		1	1	59155607	1383
ENSMUSG00000086666	lincRNA	Gm12249	ENSMUST00000132323	lincRNA		11	-1	57973134	719
ENSMUSG00000023066	protein_coding	Rttn	ENSMUST00000237196	retained_intron		18	1	89108107	1798
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000143722	processed_transcript		5	1	124450171	548
ENSMUSG00000101586	antisense	Gm29017	ENSMUST00000190598	antisense		1	1	59151047	2092
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000135667	retained_intron		5	1	124450384	814
ENSMUSG00000100029	lincRNA	D7Ertd128e	ENSMUST00000189744	lincRNA		7	1	30885031	928
ENSMUSG00000114073	protein_coding	Gm30302	ENSMUST00000220663	processed_transcript		13	-1	49799001	487
ENSMUSG00000091460	processed_pseudogene	Gm7808	ENSMUST00000082002	processed_pseudogene		9	-1	19928282	387
ENSMUSG00000049327	protein_coding	Kmt5a	ENSMUST00000125588	retained_intron		5	1	124451171	804
ENSMUSG00000021062	protein_coding	Rab15	ENSMUST00000121716	protein_coding		12	-1	76813856	739
ENSMUSG00000094262	IG_V_gene	Igkv4-62	ENSMUST00000198345	IG_V_gene		6	-1	69400344	352
ENSMUSG00000021062	protein_coding	Rab15	ENSMUST00000118604	protein_coding		12	-1	76818374	778
ENSMUSG00000094262	IG_V_gene	Igkv4-62	ENSMUST00000177795	protein_coding	principal1	6	-1	69400097	288
ENSMUSG00000106216	IG_V_pseudogene	Igkv13-61-1	ENSMUST00000198255	IG_V_pseudogene		6	1	69409506	296
ENSMUSG00000021062	protein_coding	Rab15	ENSMUST00000154765	protein_coding		12	-1	76822908	485
ENSMUSG00000051118	protein_coding	Olfr77	ENSMUST00000217347	protein_coding	principal1	9	1	19916865	5980
ENSMUSG00000047259	protein_coding	Mc4r	ENSMUST00000057942	protein_coding	principal1	18	-1	66860506	2803
ENSMUSG00000072978	processed_pseudogene	Gm5830	ENSMUST00000049117	processed_pseudogene		1	-1	78968079	443
ENSMUSG00000021062	protein_coding	Rab15	ENSMUST00000141622	protein_coding		12	-1	76819096	477
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000190010	processed_transcript		Y	-1	73348642	1581
ENSMUSG00000076552	IG_V_gene	Igkv4-61	ENSMUST00000199160	IG_V_gene		6	-1	69417455	382
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000144715	retained_intron		X	1	7762560	636
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000187895	processed_transcript		Y	-1	73348554	302
ENSMUSG00000099706	lincRNA	Gm29536	ENSMUST00000189296	lincRNA		1	-1	79224511	3283
ENSMUSG00000076552	IG_V_gene	Igkv4-61	ENSMUST00000103353	IG_V_gene	principal1	6	-1	69417178	284
ENSMUSG00000048731	protein_coding	Ggnbp1	ENSMUST00000122106	protein_coding	alternative2	17	1	27017993	1138
ENSMUSG00000029246	protein_coding	Ppat	ENSMUST00000140076	protein_coding	principal1	5	-1	76951578	3981
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000190560	processed_transcript		Y	-1	73348560	655
ENSMUSG00000021062	protein_coding	Rab15	ENSMUST00000134124	retained_intron		12	-1	76822462	1079
ENSMUSG00000054641	protein_coding	Mmrn1	ENSMUST00000129603	protein_coding	principal3	6	1	60944476	4477
ENSMUSG00000042808	protein_coding	Gpx2	ENSMUST00000221421	retained_intron		12	-1	76795497	3165
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000190939	processed_transcript		Y	-1	73348585	255
ENSMUSG00000051118	protein_coding	Olfr77	ENSMUST00000057596	protein_coding	principal1	9	1	19916865	9649
ENSMUSG00000029246	protein_coding	Ppat	ENSMUST00000031158	retained_intron		5	-1	76951165	2057
ENSMUSG00000042808	protein_coding	Gpx2	ENSMUST00000220569	processed_transcript		12	-1	76795499	1010
ENSMUSG00000048731	protein_coding	Ggnbp1	ENSMUST00000235268	processed_transcript		17	1	27018009	759
ENSMUSG00000068263	protein_coding	Efcc1	ENSMUST00000160743	retained_intron		6	1	87730869	2016
ENSMUSG00000054641	protein_coding	Mmrn1	ENSMUST00000204333	protein_coding	alternative2	6	1	60944478	4472
ENSMUSG00000028093	protein_coding	Acp6	ENSMUST00000090759	protein_coding	principal1	3	1	97158777	1754
ENSMUSG00000042808	protein_coding	Gpx2	ENSMUST00000082431	protein_coding	principal1	12	-1	76795554	1067
ENSMUSG00000047330	protein_coding	Kcne4	ENSMUST00000057262	protein_coding	principal2	1	1	78816758	2657
ENSMUSG00000048731	protein_coding	Ggnbp1	ENSMUST00000151920	retained_intron		17	1	27018013	1605
ENSMUSG00000048731	protein_coding	Ggnbp1	ENSMUST00000236076	processed_transcript		17	1	27018062	1559
ENSMUSG00000108926	processed_pseudogene	Gm10988	ENSMUST00000209150	processed_pseudogene		7	1	30151841	1088
ENSMUSG00000028093	protein_coding	Acp6	ENSMUST00000199346	retained_intron		3	1	97159096	1300
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000188199	processed_transcript		Y	-1	73346601	324
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000191323	processed_transcript		Y	-1	73348585	121
ENSMUSG00000047330	protein_coding	Kcne4	ENSMUST00000187432	protein_coding	alternative2	1	1	78816927	1813
ENSMUSG00000048731	protein_coding	Ggnbp1	ENSMUST00000053683	protein_coding	principal3	17	1	27029259	1525
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000188067	processed_transcript		Y	-1	73348586	543
ENSMUSG00000101324	lincRNA	Gm29187	ENSMUST00000186681	lincRNA		1	1	78821258	689
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000185199	processed_transcript		Y	-1	73348563	202
ENSMUSG00000034801	protein_coding	Sos2	ENSMUST00000182123	retained_intron		12	-1	69587119	2382
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000187958	processed_transcript		Y	-1	73348542	397
ENSMUSG00000048731	protein_coding	Ggnbp1	ENSMUST00000236222	protein_coding	alternative2	17	1	27029412	1168
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000189024	processed_transcript		Y	-1	73346601	229
ENSMUSG00000028093	protein_coding	Acp6	ENSMUST00000133965	retained_intron		3	1	97159103	1033
ENSMUSG00000048731	protein_coding	Ggnbp1	ENSMUST00000154731	protein_coding	alternative2	17	1	27030404	1108
ENSMUSG00000100379	transcribed_unprocessed_pseudogene	Gm28677	ENSMUST00000186904	transcribed_unprocessed_pseudogene		Y	-1	73347038	615
ENSMUSG00000048731	protein_coding	Ggnbp1	ENSMUST00000235543	protein_coding		17	1	27032859	994
ENSMUSG00000028093	protein_coding	Acp6	ENSMUST00000126438	retained_intron		3	1	97159103	924
ENSMUSG00000060735	protein_coding	Rxfp3	ENSMUST00000058007	protein_coding	principal1	15	-1	11037991	4275
ENSMUSG00000118007	antisense	Gm50254	ENSMUST00000237254	antisense		17	-1	26978626	631
ENSMUSG00000028093	protein_coding	Acp6	ENSMUST00000149900	retained_intron		3	1	97167377	852
ENSMUSG00000112602	processed_pseudogene	Gm18557	ENSMUST00000218710	processed_pseudogene		10	1	16364798	433
ENSMUSG00000112123	processed_pseudogene	Gm5178	ENSMUST00000219380	processed_pseudogene		10	-1	16425070	898
ENSMUSG00000028093	protein_coding	Acp6	ENSMUST00000146143	retained_intron		3	1	97168094	648
ENSMUSG00000028093	protein_coding	Acp6	ENSMUST00000139898	retained_intron		3	1	97171150	689
ENSMUSG00000112929	lincRNA	Gm47729	ENSMUST00000217766	lincRNA		10	1	16584268	533
ENSMUSG00000112903	processed_pseudogene	Gm5948	ENSMUST00000219627	processed_pseudogene		10	1	16768940	839
ENSMUSG00000096465	protein_coding	Olfr488	ENSMUST00000211508	protein_coding	principal1	7	-1	108257192	4624
ENSMUSG00000066820	protein_coding	Vmn2r28	ENSMUST00000233742	protein_coding	alternative2	7	-1	5493956	5822
ENSMUSG00000066820	protein_coding	Vmn2r28	ENSMUST00000233941	protein_coding		7	-1	5493956	5009
ENSMUSG00000112118	processed_pseudogene	Gm18039	ENSMUST00000217816	processed_pseudogene		10	-1	16786461	728
ENSMUSG00000055932	protein_coding	Fto	ENSMUST00000069718	protein_coding	principal1	8	1	91313525	3564
ENSMUSG00000096465	protein_coding	Olfr488	ENSMUST00000215173	protein_coding	principal1	7	-1	108258347	4605
ENSMUSG00000028093	protein_coding	Acp6	ENSMUST00000143234	retained_intron		3	1	97172642	1611
ENSMUSG00000028093	protein_coding	Acp6	ENSMUST00000198329	retained_intron		3	1	97174009	3291
ENSMUSG00000096465	protein_coding	Olfr488	ENSMUST00000072968	protein_coding	principal1	7	-1	108256136	945
ENSMUSG00000117819	protein_coding	Gm50253	ENSMUST00000133257	nonsense_mediated_decay	principal1	17	1	26973217	5012
ENSMUSG00000068263	protein_coding	Efcc1	ENSMUST00000159570	protein_coding	principal2	6	1	87730869	2293
ENSMUSG00000066820	protein_coding	Vmn2r28	ENSMUST00000233390	protein_coding		7	-1	5493956	5654
ENSMUSG00000055932	protein_coding	Fto	ENSMUST00000125471	protein_coding		8	1	91313535	3887
ENSMUSG00000094344	processed_pseudogene	Gm11942	ENSMUST00000180255	processed_pseudogene		4	1	32964888	345
ENSMUSG00000066820	protein_coding	Vmn2r28	ENSMUST00000233239	protein_coding		7	-1	5493956	5426
ENSMUSG00000066820	protein_coding	Vmn2r28	ENSMUST00000232789	protein_coding		7	-1	5493956	4613
ENSMUSG00000066820	protein_coding	Vmn2r28	ENSMUST00000086297	protein_coding	principal2	7	-1	5493956	6050
ENSMUSG00000055932	protein_coding	Fto	ENSMUST00000128081	protein_coding		8	1	91313558	4707
ENSMUSG00000055403	lincRNA	4933427D06Rik	ENSMUST00000153517	lincRNA		6	1	89096110	522
ENSMUSG00000068263	protein_coding	Efcc1	ENSMUST00000032132	protein_coding	alternative2	6	1	87730893	2729
ENSMUSG00000112499	processed_pseudogene	Gm47736	ENSMUST00000220087	processed_pseudogene		10	1	16796973	926
ENSMUSG00000055932	protein_coding	Fto	ENSMUST00000136802	protein_coding		8	1	91313568	3751
ENSMUSG00000101246	unprocessed_pseudogene	Gm29026	ENSMUST00000187787	unprocessed_pseudogene		Y	1	36940688	315
ENSMUSG00000055403	lincRNA	4933427D06Rik	ENSMUST00000068968	lincRNA		6	1	89096110	2620
ENSMUSG00000055932	protein_coding	Fto	ENSMUST00000166548	protein_coding		8	1	91313614	819
ENSMUSG00000101715	unprocessed_pseudogene	Gm21855	ENSMUST00000191596	unprocessed_pseudogene		Y	-1	73383979	696
ENSMUSG00000101382	unprocessed_pseudogene	Gm28213	ENSMUST00000189183	unprocessed_pseudogene		Y	1	37071087	615
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000036041	protein_coding	principal1	14	-1	55106593	2673
ENSMUSG00000068263	protein_coding	Efcc1	ENSMUST00000159956	processed_transcript		6	1	87732809	407
ENSMUSG00000031604	protein_coding	Msmo1	ENSMUST00000034015	protein_coding	principal1	8	-1	64733792	2044
ENSMUSG00000068263	protein_coding	Efcc1	ENSMUST00000159681	retained_intron		6	1	87753522	323
ENSMUSG00000055932	protein_coding	Fto	ENSMUST00000149913	protein_coding		8	1	91390555	762
ENSMUSG00000108079	antisense	Gm44210	ENSMUST00000205253	antisense		6	-1	87731148	713
ENSMUSG00000031604	protein_coding	Msmo1	ENSMUST00000145216	processed_transcript		8	-1	64733581	1329
ENSMUSG00000055403	lincRNA	4933427D06Rik	ENSMUST00000153981	lincRNA		6	1	89101018	683
ENSMUSG00000002279	protein_coding	Lmf1	ENSMUST00000141606	protein_coding	alternative2	17	1	25579085	2003
ENSMUSG00000055932	protein_coding	Fto	ENSMUST00000140276	processed_transcript		8	1	91467685	1312
ENSMUSG00000090692	antisense	Gm17172	ENSMUST00000171782	antisense		6	-1	29323206	190
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000132209	processed_transcript		X	1	7762586	372
ENSMUSG00000110233	TEC	Gm45427	ENSMUST00000209572	TEC		8	-1	91391945	1253
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000133004	processed_transcript		14	-1	55106132	2307
ENSMUSG00000031604	protein_coding	Msmo1	ENSMUST00000132013	retained_intron		8	-1	64733578	2766
ENSMUSG00000055403	lincRNA	4933427D06Rik	ENSMUST00000168837	lincRNA		6	1	88950683	2467
ENSMUSG00000110068	TEC	Gm45294	ENSMUST00000210685	TEC		8	1	91579288	2102
ENSMUSG00000031604	protein_coding	Msmo1	ENSMUST00000140861	processed_transcript		8	-1	64721931	816
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000137548	retained_intron		14	-1	55104510	851
ENSMUSG00000090778	antisense	Gm3235	ENSMUST00000168442	antisense		8	-1	91629729	695
ENSMUSG00000031604	protein_coding	Msmo1	ENSMUST00000147419	protein_coding		8	-1	64731059	645
ENSMUSG00000061762	protein_coding	Tac1	ENSMUST00000185187	protein_coding	principal1	6	1	7554879	1230
ENSMUSG00000109642	TEC	Gm45289	ENSMUST00000211048	TEC		8	1	91493019	2577
ENSMUSG00000039742	protein_coding	Fam71f1	ENSMUST00000168771	processed_transcript		6	1	29319140	715
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000153702	retained_intron		14	-1	55104891	807
ENSMUSG00000094025	protein_coding	Gm8879	ENSMUST00000170260	protein_coding	principal1	5	1	11127634	1125
ENSMUSG00000109709	TEC	Gm45290	ENSMUST00000211177	TEC		8	-1	91532724	3890
ENSMUSG00000094025	protein_coding	Gm8879	ENSMUST00000178863	protein_coding		5	1	11128868	465
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000137481	retained_intron		14	-1	55106561	478
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000144197	processed_transcript		14	-1	55106508	345
ENSMUSG00000061762	protein_coding	Tac1	ENSMUST00000090679	protein_coding		6	1	7555074	980
ENSMUSG00000099967	lincRNA	Gm28212	ENSMUST00000187114	lincRNA		Y	-1	37084351	356
ENSMUSG00000031604	protein_coding	Msmo1	ENSMUST00000135943	retained_intron		8	-1	64733548	2969
ENSMUSG00000061762	protein_coding	Tac1	ENSMUST00000184986	protein_coding		6	1	7555096	691
ENSMUSG00000083922	processed_pseudogene	Gm3835	ENSMUST00000120752	processed_pseudogene		8	-1	72429952	403
ENSMUSG00000031604	protein_coding	Msmo1	ENSMUST00000141021	protein_coding		8	-1	64733548	342
ENSMUSG00000032036	protein_coding	Kirrel3	ENSMUST00000187625	protein_coding		9	1	34488733	4108
ENSMUSG00000110138	antisense	4831440D22Rik	ENSMUST00000211287	antisense		8	-1	91474598	2929
ENSMUSG00000029922	protein_coding	Mkrn1	ENSMUST00000114823	protein_coding	alternative2	6	-1	39419776	2992
ENSMUSG00000040701	protein_coding	Ap1g2	ENSMUST00000170285	protein_coding	principal1	14	-1	55106147	2596
ENSMUSG00000118298	protein_coding	Vmn1r60	ENSMUST00000236262	protein_coding	alternative2	7	-1	5545309	5964
ENSMUSG00000110079	TEC	Gm45292	ENSMUST00000211232	TEC		8	1	91450306	2207
ENSMUSG00000118298	protein_coding	Vmn1r60	ENSMUST00000237052	processed_transcript		7	-1	5547317	3860
ENSMUSG00000061762	protein_coding	Tac1	ENSMUST00000185130	protein_coding		6	1	7556091	434
ENSMUSG00000106713	TEC	Gm42645	ENSMUST00000201573	TEC		5	1	65853332	1627
ENSMUSG00000118298	protein_coding	Vmn1r60	ENSMUST00000173782	protein_coding	principal2	7	-1	5545099	903
ENSMUSG00000019975	protein_coding	Ikbip	ENSMUST00000020150	protein_coding	principal1	10	1	91082940	1328
ENSMUSG00000106776	TEC	Gm42646	ENSMUST00000202233	TEC		5	1	65857318	914
ENSMUSG00000002279	protein_coding	Lmf1	ENSMUST00000116641	protein_coding	principal2	17	1	25579177	1858
ENSMUSG00000061762	protein_coding	Tac1	ENSMUST00000184481	processed_transcript		6	1	7562368	1975
ENSMUSG00000106681	TEC	Gm43004	ENSMUST00000201872	TEC		5	1	65859317	703
ENSMUSG00000032036	protein_coding	Kirrel3	ENSMUST00000190549	protein_coding		9	1	34488795	3074
ENSMUSG00000040751	protein_coding	Lat2	ENSMUST00000077636	protein_coding		5	-1	134615025	1717
ENSMUSG00000101161	unprocessed_pseudogene	Gm21799	ENSMUST00000190662	unprocessed_pseudogene		Y	1	37100609	696
ENSMUSG00000032036	protein_coding	Kirrel3	ENSMUST00000045091	protein_coding		9	1	34488795	4147
ENSMUSG00000092336	unprocessed_pseudogene	Vmn1r-ps40	ENSMUST00000172862	unprocessed_pseudogene		7	-1	5573075	343
ENSMUSG00000102613	unprocessed_pseudogene	Gm20836	ENSMUST00000194582	unprocessed_pseudogene		Y	-1	13911041	696
ENSMUSG00000001520	protein_coding	Nrip2	ENSMUST00000123867	protein_coding		6	1	128399296	668
ENSMUSG00000093452	antisense	Zfhx2os	ENSMUST00000176872	antisense		14	1	55053869	472
ENSMUSG00000103524	lincRNA	Gm37263	ENSMUST00000195837	lincRNA		Y	-1	13920389	2169
ENSMUSG00000099182	processed_pseudogene	Gm8676	ENSMUST00000184206	processed_pseudogene		6	1	7643906	637
ENSMUSG00000019975	protein_coding	Ikbip	ENSMUST00000020149	protein_coding		10	1	91083057	3232
ENSMUSG00000031751	protein_coding	Amfr	ENSMUST00000053766	protein_coding	principal1	8	-1	94012842	3880
ENSMUSG00000093452	antisense	Zfhx2os	ENSMUST00000183750	antisense		14	1	55053947	4375
ENSMUSG00000032036	protein_coding	Kirrel3	ENSMUST00000188933	protein_coding		9	1	34488828	3643
ENSMUSG00000104982	lincRNA	Gm32554	ENSMUST00000196310	lincRNA		5	-1	11181825	970
ENSMUSG00000001520	protein_coding	Nrip2	ENSMUST00000147155	nonsense_mediated_decay		6	1	128399308	774
ENSMUSG00000019975	protein_coding	Ikbip	ENSMUST00000128371	processed_transcript		10	1	91083106	418
ENSMUSG00000100162	antisense	Gm20687	ENSMUST00000183822	antisense		14	1	55054945	670
ENSMUSG00000032036	protein_coding	Kirrel3	ENSMUST00000187182	protein_coding		9	1	34488936	3532
ENSMUSG00000019975	protein_coding	Ikbip	ENSMUST00000135152	retained_intron		10	1	91083120	853
ENSMUSG00000031751	protein_coding	Amfr	ENSMUST00000139702	retained_intron		8	-1	93974916	779
ENSMUSG00000103681	lincRNA	Gm37130	ENSMUST00000195874	lincRNA		Y	1	13952701	621
ENSMUSG00000103681	lincRNA	Gm37130	ENSMUST00000192707	lincRNA		Y	1	13952701	437
ENSMUSG00000019975	protein_coding	Ikbip	ENSMUST00000130682	processed_transcript		10	1	91095975	839
ENSMUSG00000031751	protein_coding	Amfr	ENSMUST00000137475	processed_transcript		8	-1	93973961	392
ENSMUSG00000032036	protein_coding	Kirrel3	ENSMUST00000188658	protein_coding		9	1	35016452	1644
ENSMUSG00000019975	protein_coding	Ikbip	ENSMUST00000211056	processed_transcript		10	1	91100430	789
ENSMUSG00000100162	antisense	Gm20687	ENSMUST00000183993	antisense		14	1	55054957	792
ENSMUSG00000031751	protein_coding	Amfr	ENSMUST00000143265	protein_coding		8	-1	94012127	414
ENSMUSG00000002279	protein_coding	Lmf1	ENSMUST00000126164	retained_intron		17	1	25579187	2769
ENSMUSG00000095918	protein_coding	Gm5861	ENSMUST00000171093	protein_coding	principal5	5	1	11183072	1096
ENSMUSG00000115911	processed_pseudogene	Gm3919	ENSMUST00000230459	processed_pseudogene		16	-1	11037331	658
ENSMUSG00000109174	processed_pseudogene	Gm6007	ENSMUST00000208170	processed_pseudogene		7	1	108269529	823
ENSMUSG00000032036	protein_coding	Kirrel3	ENSMUST00000115148	protein_coding	principal1	9	1	34486126	2851
ENSMUSG00000095918	protein_coding	Gm5861	ENSMUST00000168407	protein_coding	alternative2	5	1	11184207	1016
ENSMUSG00000109639	unprocessed_pseudogene	Olfr489-ps1	ENSMUST00000210404	unprocessed_pseudogene		7	1	108276746	967
ENSMUSG00000100162	antisense	Gm20687	ENSMUST00000185121	antisense		14	1	55055493	4242
ENSMUSG00000105705	processed_pseudogene	AC174780.1	ENSMUST00000199415	processed_pseudogene		5	1	11137279	1107
ENSMUSG00000037762	protein_coding	Slc16a9	ENSMUST00000046807	protein_coding	principal1	10	1	70245100	3756
ENSMUSG00000001520	protein_coding	Nrip2	ENSMUST00000001561	protein_coding	principal1	6	1	128399766	1893
ENSMUSG00000100705	unprocessed_pseudogene	Gm28227	ENSMUST00000186862	unprocessed_pseudogene		Y	1	37172530	696
ENSMUSG00000109884	protein_coding	Olfr490	ENSMUST00000211345	protein_coding	principal1	7	-1	108288934	1275
ENSMUSG00000070820	protein_coding	Olfr1339	ENSMUST00000217522	protein_coding	principal1	4	1	118732175	2559
ENSMUSG00000040751	protein_coding	Lat2	ENSMUST00000036362	protein_coding	principal1	5	-1	134614990	1637
ENSMUSG00000109884	protein_coding	Olfr490	ENSMUST00000210114	protein_coding	principal1	7	-1	108287124	945
ENSMUSG00000002279	protein_coding	Lmf1	ENSMUST00000137201	nonsense_mediated_decay		17	1	25579187	1424
ENSMUSG00000117863	protein_coding	Vmn1r61	ENSMUST00000238042	nonsense_mediated_decay		7	-1	5611489	8706
ENSMUSG00000053889	antisense	Kirrel3os	ENSMUST00000066604	antisense		9	-1	34929509	3799
ENSMUSG00000117863	protein_coding	Vmn1r61	ENSMUST00000236051	processed_transcript		7	-1	5613295	3587
ENSMUSG00000070820	protein_coding	Olfr1339	ENSMUST00000094832	protein_coding	principal1	4	1	118734531	948
ENSMUSG00000117863	protein_coding	Vmn1r61	ENSMUST00000238026	retained_intron		7	-1	5613295	7766
ENSMUSG00000029409	processed_transcript	U90926	ENSMUST00000201332	lincRNA		5	-1	92215408	524
ENSMUSG00000037762	protein_coding	Slc16a9	ENSMUST00000155933	retained_intron		10	1	70266979	1469
ENSMUSG00000117863	protein_coding	Vmn1r61	ENSMUST00000164880	protein_coding	principal1	7	-1	5611489	1662
ENSMUSG00000029922	protein_coding	Mkrn1	ENSMUST00000031985	protein_coding	principal3	6	-1	39420462	3046
ENSMUSG00000040751	protein_coding	Lat2	ENSMUST00000200998	protein_coding	principal1	5	-1	134609011	1481
ENSMUSG00000029409	processed_transcript	U90926	ENSMUST00000202847	retained_intron		5	-1	92212350	400
ENSMUSG00000108422	TEC	Gm44765	ENSMUST00000206927	TEC		7	1	64283800	601
ENSMUSG00000103552	TEC	Gm38217	ENSMUST00000194358	TEC		9	1	34521755	910
ENSMUSG00000001520	protein_coding	Nrip2	ENSMUST00000120405	protein_coding		6	1	128399970	1468
ENSMUSG00000089835	antisense	Gm7097	ENSMUST00000161841	antisense		10	-1	70284953	491
ENSMUSG00000029409	processed_transcript	U90926	ENSMUST00000031356	processed_transcript		5	-1	92215408	520
ENSMUSG00000040751	protein_coding	Lat2	ENSMUST00000201632	protein_coding		5	-1	134606363	801
ENSMUSG00000112676	processed_pseudogene	Gm20108	ENSMUST00000219977	processed_pseudogene		10	1	70338302	153
ENSMUSG00000016409	protein_coding	Nkap	ENSMUST00000016553	protein_coding	principal1	X	1	37126795	4230
ENSMUSG00000029922	protein_coding	Mkrn1	ENSMUST00000150575	protein_coding		6	-1	39404730	773
ENSMUSG00000112884	lincRNA	Gm47946	ENSMUST00000219437	lincRNA		10	-1	70415581	639
ENSMUSG00000095218	protein_coding	Olfr1338	ENSMUST00000214922	protein_coding	alternative2	4	-1	118758716	2947
ENSMUSG00000001520	protein_coding	Nrip2	ENSMUST00000136631	retained_intron		6	1	128400048	3261
ENSMUSG00000095218	protein_coding	Olfr1338	ENSMUST00000216559	protein_coding	alternative2	4	-1	118758737	2829
ENSMUSG00000029922	protein_coding	Mkrn1	ENSMUST00000122996	protein_coding		6	-1	39420067	1485
ENSMUSG00000001520	protein_coding	Nrip2	ENSMUST00000204836	non_stop_decay		6	1	128400293	572
ENSMUSG00000002279	protein_coding	Lmf1	ENSMUST00000154842	processed_transcript		17	1	25579197	1216
ENSMUSG00000016409	protein_coding	Nkap	ENSMUST00000152906	retained_intron		X	1	37136416	515
ENSMUSG00000057789	protein_coding	Bak1	ENSMUST00000078691	protein_coding	principal1	17	-1	27029009	2387
ENSMUSG00000029922	protein_coding	Mkrn1	ENSMUST00000051671	protein_coding		6	-1	39420358	1511
ENSMUSG00000095218	protein_coding	Olfr1338	ENSMUST00000084315	protein_coding	principal2	4	-1	118754536	942
ENSMUSG00000056267	protein_coding	Cep70	ENSMUST00000093795	protein_coding	principal2	9	1	99243442	2606
ENSMUSG00000029922	protein_coding	Mkrn1	ENSMUST00000122874	retained_intron		6	-1	39405081	584
ENSMUSG00000040751	protein_coding	Lat2	ENSMUST00000200945	processed_transcript		5	-1	134605808	767
ENSMUSG00000029922	protein_coding	Mkrn1	ENSMUST00000146785	protein_coding		6	-1	39419757	542
ENSMUSG00000040721	protein_coding	Zfhx2	ENSMUST00000036328	protein_coding	principal1	14	-1	55092324	10397
ENSMUSG00000040751	protein_coding	Lat2	ENSMUST00000200737	nonsense_mediated_decay		5	-1	134615006	845
ENSMUSG00000056267	protein_coding	Cep70	ENSMUST00000189371	retained_intron		9	1	99243453	395
ENSMUSG00000029922	protein_coding	Mkrn1	ENSMUST00000114822	protein_coding		6	-1	39420298	751
ENSMUSG00000040751	protein_coding	Lat2	ENSMUST00000202746	retained_intron		5	-1	134603920	844
ENSMUSG00000056267	protein_coding	Cep70	ENSMUST00000190715	protein_coding	alternative2	9	1	99243461	1768
ENSMUSG00000022500	protein_coding	Litaf	ENSMUST00000023143	protein_coding	principal1	16	-1	10993121	2235
ENSMUSG00000039742	protein_coding	Fam71f1	ENSMUST00000090487	protein_coding	principal3	6	1	29319140	1584
ENSMUSG00000056267	protein_coding	Cep70	ENSMUST00000191335	protein_coding	alternative2	9	1	99243463	2120
ENSMUSG00000002279	protein_coding	Lmf1	ENSMUST00000142264	retained_intron		17	1	25579199	3863
ENSMUSG00000022500	protein_coding	Litaf	ENSMUST00000117360	protein_coding	principal1	16	-1	10975579	763
ENSMUSG00000056267	protein_coding	Cep70	ENSMUST00000190078	protein_coding		9	1	99243482	669
ENSMUSG00000020561	protein_coding	Twistnb	ENSMUST00000219769	processed_transcript		12	1	33429635	405
ENSMUSG00000040721	protein_coding	Zfhx2	ENSMUST00000176665	retained_intron		14	-1	55072234	1943
ENSMUSG00000022500	protein_coding	Litaf	ENSMUST00000162323	protein_coding		16	-1	11066157	456
ENSMUSG00000040721	protein_coding	Zfhx2	ENSMUST00000185430	retained_intron		14	-1	55080452	5884
ENSMUSG00000079304	protein_coding	Tex52	ENSMUST00000130785	protein_coding		6	1	128375456	1424
ENSMUSG00000040721	protein_coding	Zfhx2	ENSMUST00000188534	retained_intron		14	-1	55092042	2471
ENSMUSG00000022500	protein_coding	Litaf	ENSMUST00000140170	retained_intron		16	-1	10993071	345
ENSMUSG00000002279	protein_coding	Lmf1	ENSMUST00000128146	retained_intron		17	1	25579199	3815
ENSMUSG00000056267	protein_coding	Cep70	ENSMUST00000191014	nonsense_mediated_decay		9	1	99243526	1138
ENSMUSG00000022500	protein_coding	Litaf	ENSMUST00000230709	processed_transcript		16	-1	11066122	2639
ENSMUSG00000002279	protein_coding	Lmf1	ENSMUST00000127280	retained_intron		17	1	25579199	3165
ENSMUSG00000096966	protein_coding	Gm18336	ENSMUST00000180787	protein_coding	principal1	X	-1	73398736	2298
ENSMUSG00000057789	protein_coding	Bak1	ENSMUST00000025034	nonsense_mediated_decay		17	-1	27028578	1974
ENSMUSG00000039742	protein_coding	Fam71f1	ENSMUST00000164560	protein_coding	alternative1	6	1	29319157	1411
ENSMUSG00000079304	protein_coding	Tex52	ENSMUST00000100926	protein_coding	principal1	6	1	128375456	1146
ENSMUSG00000002279	protein_coding	Lmf1	ENSMUST00000156868	processed_transcript		17	1	25579320	606
ENSMUSG00000115992	lincRNA	Gm10832	ENSMUST00000229764	lincRNA		16	1	11031956	701
ENSMUSG00000036551	protein_coding	Akap14	ENSMUST00000046557	protein_coding	principal1	X	-1	37168842	1792
ENSMUSG00000056267	protein_coding	Cep70	ENSMUST00000188515	retained_intron		9	1	99246287	535
ENSMUSG00000040751	protein_coding	Lat2	ENSMUST00000202461	processed_transcript		5	-1	134614985	429
ENSMUSG00000057789	protein_coding	Bak1	ENSMUST00000237411	nonsense_mediated_decay		17	-1	27028587	1958
ENSMUSG00000062524	protein_coding	Ncr1	ENSMUST00000006792	protein_coding	principal2	7	1	4337724	1463
ENSMUSG00000002279	protein_coding	Lmf1	ENSMUST00000063344	protein_coding	alternative2	17	1	25579174	1861
ENSMUSG00000056267	protein_coding	Cep70	ENSMUST00000187883	retained_intron		9	1	99291488	431
ENSMUSG00000039742	protein_coding	Fam71f1	ENSMUST00000163229	nonsense_mediated_decay		6	1	29319157	1406
ENSMUSG00000116274	processed_pseudogene	Gm18724	ENSMUST00000229230	processed_pseudogene		16	1	11046904	1103
ENSMUSG00000040751	protein_coding	Lat2	ENSMUST00000202085	protein_coding		5	-1	134614966	451
ENSMUSG00000057789	protein_coding	Bak1	ENSMUST00000143158	protein_coding		17	-1	27028694	902
ENSMUSG00000020639	protein_coding	Pfn4	ENSMUST00000219503	protein_coding		12	1	4769022	4775
ENSMUSG00000062524	protein_coding	Ncr1	ENSMUST00000126417	protein_coding	alternative2	7	1	4337769	1495
ENSMUSG00000040751	protein_coding	Lat2	ENSMUST00000201832	retained_intron		5	-1	134608166	467
ENSMUSG00000037972	protein_coding	Snn	ENSMUST00000228962	protein_coding	principal1	16	1	11060945	847
ENSMUSG00000085739	antisense	Gm15862	ENSMUST00000146349	antisense		6	-1	128399740	361
ENSMUSG00000039742	protein_coding	Fam71f1	ENSMUST00000166462	protein_coding	alternative1	6	1	29319199	1363
ENSMUSG00000050468	protein_coding	Astl	ENSMUST00000089673	protein_coding	alternative2	2	1	127341630	2251
ENSMUSG00000104409	lincRNA	Gm37467	ENSMUST00000192785	lincRNA		Y	1	13980581	1499
ENSMUSG00000087027	lincRNA	Gm13206	ENSMUST00000129579	lincRNA		4	1	148306853	1090
ENSMUSG00000037972	protein_coding	Snn	ENSMUST00000089011	protein_coding	principal1	16	1	11066330	2872
ENSMUSG00000020639	protein_coding	Pfn4	ENSMUST00000219438	protein_coding		12	1	4769167	454
ENSMUSG00000101425	lincRNA	Gm29255	ENSMUST00000185248	lincRNA		Y	1	73425315	1498
ENSMUSG00000079605	protein_coding	Zbtb9	ENSMUST00000120016	protein_coding	principal1	17	1	26973167	2796
ENSMUSG00000083628	protein_coding	Gm2030	ENSMUST00000119590	protein_coding	principal1	X	-1	26310044	1129
ENSMUSG00000086326	lincRNA	Gm13200	ENSMUST00000138802	lincRNA		4	-1	148359460	258
ENSMUSG00000001517	protein_coding	Foxm1	ENSMUST00000123988	processed_transcript		6	1	128362967	1329
ENSMUSG00000101425	lincRNA	Gm29255	ENSMUST00000187205	lincRNA		Y	1	73425767	438
ENSMUSG00000079605	protein_coding	Zbtb9	ENSMUST00000237633	nonsense_mediated_decay		17	1	26973217	3432
ENSMUSG00000100698	unprocessed_pseudogene	Gm20902	ENSMUST00000185643	unprocessed_pseudogene		Y	-1	73536230	696
ENSMUSG00000104409	lincRNA	Gm37467	ENSMUST00000192156	lincRNA		Y	1	13981034	621
ENSMUSG00000104409	lincRNA	Gm37467	ENSMUST00000195697	lincRNA		Y	1	13981034	437
ENSMUSG00000099547	unprocessed_pseudogene	Gm28678	ENSMUST00000191593	unprocessed_pseudogene		Y	-1	73607557	696
ENSMUSG00000108667	processed_pseudogene	Gm45013	ENSMUST00000206883	processed_pseudogene		7	1	4359599	178
ENSMUSG00000086588	lincRNA	Gm11729	ENSMUST00000124901	lincRNA		11	1	117414389	713
ENSMUSG00000104127	unprocessed_pseudogene	Gm20928	ENSMUST00000192992	unprocessed_pseudogene		Y	-1	14030398	696
ENSMUSG00000103857	TEC	Gm37249	ENSMUST00000195185	TEC		9	1	99307583	2869
ENSMUSG00000083705	transcribed_processed_pseudogene	Gm8624	ENSMUST00000165677	processed_transcript		11	-1	117421717	669
ENSMUSG00000087309	lincRNA	4930528P14Rik	ENSMUST00000152815	lincRNA		2	-1	115344280	509
ENSMUSG00000020561	protein_coding	Twistnb	ENSMUST00000020877	protein_coding	principal1	12	1	33429635	4325
ENSMUSG00000083705	transcribed_processed_pseudogene	Gm8624	ENSMUST00000118083	transcribed_processed_pseudogene		11	-1	117421127	432
ENSMUSG00000086197	lincRNA	Gm13976	ENSMUST00000154367	lincRNA		2	1	115344385	479
ENSMUSG00000020639	protein_coding	Pfn4	ENSMUST00000020967	protein_coding	principal1	12	1	4769295	1306
ENSMUSG00000116914	processed_pseudogene	Gm20942	ENSMUST00000231586	processed_pseudogene		16	-1	58555705	589
ENSMUSG00000103872	lincRNA	Gm38363	ENSMUST00000195029	lincRNA		Y	1	14071394	622
ENSMUSG00000020561	protein_coding	Twistnb	ENSMUST00000218748	processed_transcript		12	1	33430069	316
ENSMUSG00000103872	lincRNA	Gm38363	ENSMUST00000193723	lincRNA		Y	1	14071394	437
ENSMUSG00000020561	protein_coding	Twistnb	ENSMUST00000219758	retained_intron		12	1	33436781	935
ENSMUSG00000020916	protein_coding	Krt36	ENSMUST00000107416	protein_coding	principal1	11	-1	100105626	1671
ENSMUSG00000080819	unprocessed_pseudogene	Gm2005	ENSMUST00000120759	unprocessed_pseudogene		X	-1	26492662	542
ENSMUSG00000037624	protein_coding	Kcnk2	ENSMUST00000079451	protein_coding	alternative1	1	-1	189344192	3297
ENSMUSG00000020639	protein_coding	Pfn4	ENSMUST00000178879	protein_coding	principal1	12	1	4769339	1396
ENSMUSG00000086702	lincRNA	Gm12347	ENSMUST00000127883	lincRNA		11	-1	100112106	470
ENSMUSG00000099782	protein_coding	Gm20903	ENSMUST00000189346	protein_coding	principal1	Y	1	73669315	923
ENSMUSG00000021614	protein_coding	Vcan	ENSMUST00000159910	protein_coding		13	-1	89742322	8332
ENSMUSG00000037624	protein_coding	Kcnk2	ENSMUST00000180044	nonsense_mediated_decay		1	-1	189402273	3131
ENSMUSG00000085336	processed_transcript	Gm11732	ENSMUST00000151381	processed_transcript		11	1	117426178	1742
ENSMUSG00000050545	protein_coding	Fam228b	ENSMUST00000218905	processed_transcript		12	-1	4762409	239
ENSMUSG00000117791	lincRNA	4930541O19Rik	ENSMUST00000237100	lincRNA		17	-1	25698849	302
ENSMUSG00000101038	unprocessed_pseudogene	Gm28272	ENSMUST00000189512	unprocessed_pseudogene		Y	-1	73761268	696
ENSMUSG00000110653	lincRNA	Gm34418	ENSMUST00000212879	lincRNA		11	-1	117482597	309
ENSMUSG00000037624	protein_coding	Kcnk2	ENSMUST00000194172	protein_coding		1	-1	189402218	1200
ENSMUSG00000037624	protein_coding	Kcnk2	ENSMUST00000194402	protein_coding	alternative1	1	-1	189402213	1373
ENSMUSG00000104001	processed_pseudogene	Gm38334	ENSMUST00000195060	processed_pseudogene		3	-1	51571423	313
ENSMUSG00000050468	protein_coding	Astl	ENSMUST00000059839	protein_coding	principal3	2	1	127338639	2377
ENSMUSG00000031374	protein_coding	Zfp92	ENSMUST00000033740	protein_coding	principal1	X	1	73411096	5767
ENSMUSG00000050468	protein_coding	Astl	ENSMUST00000156747	protein_coding		2	1	127341918	648
ENSMUSG00000020901	protein_coding	Pik3r5	ENSMUST00000021283	protein_coding	principal1	11	1	68432121	4370
ENSMUSG00000031374	protein_coding	Zfp92	ENSMUST00000086470	protein_coding		X	1	73411560	2050
ENSMUSG00000019732	protein_coding	Calr3	ENSMUST00000019876	protein_coding	principal1	8	-1	72443870	1769
ENSMUSG00000042671	protein_coding	Rgs8	ENSMUST00000041776	protein_coding	principal3	1	1	153653025	8474
ENSMUSG00000097110	antisense	Gm26726	ENSMUST00000181889	antisense		X	-1	73411436	395
ENSMUSG00000069588	protein_coding	Gm11733	ENSMUST00000092394	protein_coding	principal1	11	1	117484368	2311
ENSMUSG00000103141	TEC	Gm37741	ENSMUST00000191768	TEC		X	1	73407676	1256
ENSMUSG00000050468	protein_coding	Astl	ENSMUST00000179618	protein_coding	principal3	2	1	127341644	2236
ENSMUSG00000042671	protein_coding	Rgs8	ENSMUST00000124500	protein_coding		1	1	153661081	713
ENSMUSG00000029047	protein_coding	Pex10	ENSMUST00000103180	protein_coding	principal1	4	1	155067016	1688
ENSMUSG00000105639	TEC	Gm42516	ENSMUST00000198691	TEC		3	-1	110244628	767
ENSMUSG00000021614	protein_coding	Vcan	ENSMUST00000159337	protein_coding		13	-1	89742318	2273
ENSMUSG00000050640	protein_coding	Tmem150c	ENSMUST00000063192	protein_coding	principal1	5	-1	100159808	3084
ENSMUSG00000020901	protein_coding	Pik3r5	ENSMUST00000154220	processed_transcript		11	1	68432125	815
ENSMUSG00000085419	lincRNA	Gm11734	ENSMUST00000132261	lincRNA		11	1	117523603	728
ENSMUSG00000042671	protein_coding	Rgs8	ENSMUST00000111815	protein_coding	alternative1	1	1	153664616	765
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000039431	protein_coding	principal2	7	-1	78578408	19703
ENSMUSG00000101969	processed_transcript	Gm20125	ENSMUST00000207720	lincRNA		10	-1	17095608	1658
ENSMUSG00000050545	protein_coding	Fam228b	ENSMUST00000219898	protein_coding	alternative2	12	-1	4768521	288
ENSMUSG00000101969	processed_transcript	Gm20125	ENSMUST00000209129	lincRNA		10	-1	16977148	1725
ENSMUSG00000037624	protein_coding	Kcnk2	ENSMUST00000193319	protein_coding	principal4	1	-1	189343355	1548
ENSMUSG00000020901	protein_coding	Pik3r5	ENSMUST00000141716	processed_transcript		11	1	68432160	676
ENSMUSG00000050545	protein_coding	Fam228b	ENSMUST00000218422	processed_transcript		12	-1	4745730	233
ENSMUSG00000019732	protein_coding	Calr3	ENSMUST00000109974	protein_coding		8	-1	72435156	1371
ENSMUSG00000042671	protein_coding	Rgs8	ENSMUST00000152114	protein_coding		1	1	153665274	820
ENSMUSG00000101969	processed_transcript	Gm20125	ENSMUST00000185722	lincRNA		10	-1	17095782	3201
ENSMUSG00000021614	protein_coding	Vcan	ENSMUST00000160029	retained_intron		13	-1	89721971	2144
ENSMUSG00000101969	processed_transcript	Gm20125	ENSMUST00000208191	lincRNA		10	-1	16963180	1169
ENSMUSG00000101969	processed_transcript	Gm20125	ENSMUST00000207495	lincRNA		10	-1	17034656	1344
ENSMUSG00000101969	processed_transcript	Gm20125	ENSMUST00000207111	lincRNA		10	-1	17034674	1238
ENSMUSG00000101969	processed_transcript	Gm20125	ENSMUST00000208596	lincRNA		10	-1	17086293	1714
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000205354	nonsense_mediated_decay		7	-1	78192743	4386
ENSMUSG00000042671	protein_coding	Rgs8	ENSMUST00000111812	protein_coding	principal3	1	1	153665312	3625
ENSMUSG00000101969	processed_transcript	Gm20125	ENSMUST00000208005	lincRNA		10	-1	17095657	1979
ENSMUSG00000105509	antisense	C130013H08Rik	ENSMUST00000197569	antisense		3	1	110250015	3692
ENSMUSG00000029047	protein_coding	Pex10	ENSMUST00000123395	processed_transcript		4	1	155067054	491
ENSMUSG00000050545	protein_coding	Fam228b	ENSMUST00000217684	processed_transcript		12	-1	4744557	386
ENSMUSG00000101969	processed_transcript	Gm20125	ENSMUST00000208415	lincRNA		10	-1	16996319	892
ENSMUSG00000050545	protein_coding	Fam228b	ENSMUST00000223500	processed_transcript		12	-1	4745730	225
ENSMUSG00000101969	processed_transcript	Gm20125	ENSMUST00000208870	retained_intron		10	-1	17095807	1249
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000195262	protein_coding	alternative2	7	-1	78577783	2774
ENSMUSG00000037624	protein_coding	Kcnk2	ENSMUST00000192723	protein_coding	alternative1	1	-1	189343707	1642
ENSMUSG00000029047	protein_coding	Pex10	ENSMUST00000125432	processed_transcript		4	1	155067057	2790
ENSMUSG00000096874	processed_pseudogene	Gm10312	ENSMUST00000078515	processed_pseudogene		13	1	60771675	489
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000193002	protein_coding	alternative2	7	-1	78577789	2678
ENSMUSG00000029047	protein_coding	Pex10	ENSMUST00000133116	processed_transcript		4	1	155067059	412
ENSMUSG00000049300	protein_coding	Prmt6	ENSMUST00000168412	nonsense_mediated_decay		3	-1	110250998	3059
ENSMUSG00000042671	protein_coding	Rgs8	ENSMUST00000147700	protein_coding		1	1	153665593	651
ENSMUSG00000100604	processed_pseudogene	Gm29256	ENSMUST00000189094	processed_pseudogene		Y	-1	73789455	312
ENSMUSG00000050545	protein_coding	Fam228b	ENSMUST00000218856	protein_coding		12	-1	4748308	349
ENSMUSG00000029047	protein_coding	Pex10	ENSMUST00000134341	processed_transcript		4	1	155067059	651
ENSMUSG00000037624	protein_coding	Kcnk2	ENSMUST00000193686	processed_transcript		1	-1	189215217	334
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000205868	nonsense_mediated_decay		7	-1	78261887	395
ENSMUSG00000037624	protein_coding	Kcnk2	ENSMUST00000192529	processed_transcript		1	-1	189243434	384
ENSMUSG00000042671	protein_coding	Rgs8	ENSMUST00000147482	protein_coding		1	1	153665657	585
ENSMUSG00000050640	protein_coding	Tmem150c	ENSMUST00000146731	retained_intron		5	-1	100159432	2551
ENSMUSG00000037624	protein_coding	Kcnk2	ENSMUST00000195016	processed_transcript		1	-1	189346981	493
ENSMUSG00000034801	protein_coding	Sos2	ENSMUST00000035773	protein_coding	principal2	12	-1	69681852	5607
ENSMUSG00000099554	lincRNA	Gm28259	ENSMUST00000190319	lincRNA		Y	1	73826159	1497
ENSMUSG00000042671	protein_coding	Rgs8	ENSMUST00000111814	protein_coding	alternative1	1	1	153665673	678
ENSMUSG00000049300	protein_coding	Prmt6	ENSMUST00000106567	protein_coding	principal1	3	-1	110250998	2450
ENSMUSG00000020628	protein_coding	Trappc12	ENSMUST00000168129	protein_coding	principal1	12	-1	28750472	3230
ENSMUSG00000039682	protein_coding	Lap3	ENSMUST00000046122	protein_coding	principal1	5	1	45493374	2267
ENSMUSG00000050640	protein_coding	Tmem150c	ENSMUST00000124145	retained_intron		5	-1	100122796	2715
ENSMUSG00000099554	lincRNA	Gm28259	ENSMUST00000190815	lincRNA		Y	1	73826611	433
ENSMUSG00000020901	protein_coding	Pik3r5	ENSMUST00000126876	processed_transcript		11	1	68473795	2625
ENSMUSG00000050640	protein_coding	Tmem150c	ENSMUST00000165548	retained_intron		5	-1	100159570	599
ENSMUSG00000042671	protein_coding	Rgs8	ENSMUST00000111810	protein_coding	principal3	1	1	153665709	5614
ENSMUSG00000049300	protein_coding	Prmt6	ENSMUST00000190378	protein_coding	principal1	3	-1	110250993	3051
ENSMUSG00000020901	protein_coding	Pik3r5	ENSMUST00000155887	processed_transcript		11	1	68475481	1793
ENSMUSG00000111922	lincRNA	Gm47760	ENSMUST00000220296	lincRNA		10	-1	17332877	635
ENSMUSG00000056055	protein_coding	Sag	ENSMUST00000156381	retained_intron		1	1	87803680	1086
ENSMUSG00000037624	protein_coding	Kcnk2	ENSMUST00000110920	protein_coding	alternative1	1	-1	189343832	3572
ENSMUSG00000050640	protein_coding	Tmem150c	ENSMUST00000139520	protein_coding		5	-1	100159281	436
ENSMUSG00000112478	lincRNA	Gm47761	ENSMUST00000217920	lincRNA		10	-1	17323228	3093
ENSMUSG00000020628	protein_coding	Trappc12	ENSMUST00000221783	processed_transcript		12	-1	28701609	437
ENSMUSG00000112478	lincRNA	Gm47761	ENSMUST00000219259	lincRNA		10	-1	17321611	1812
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000185594	protein_coding	alternative1	1	1	64532645	1569
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000039438	protein_coding		7	-1	78577982	3977
ENSMUSG00000103669	sense_overlapping	2900042K21Rik	ENSMUST00000194444	sense_overlapping		1	-1	189211013	653
ENSMUSG00000001517	protein_coding	Foxm1	ENSMUST00000073316	protein_coding	principal2	6	1	128362967	4652
ENSMUSG00000039682	protein_coding	Lap3	ENSMUST00000137699	retained_intron		5	1	45493504	838
ENSMUSG00000042671	protein_coding	Rgs8	ENSMUST00000147794	processed_transcript		1	1	153667489	522
ENSMUSG00000039682	protein_coding	Lap3	ENSMUST00000198534	protein_coding		5	1	45493526	322
ENSMUSG00000102824	processed_pseudogene	Pdcd5-ps	ENSMUST00000191699	processed_pseudogene		1	-1	189277823	381
ENSMUSG00000075002	protein_coding	Ftdc1	ENSMUST00000099663	protein_coding	principal1	16	-1	58616978	713
ENSMUSG00000100945	antisense	Gm29529	ENSMUST00000187154	antisense		1	-1	153692656	714
ENSMUSG00000001517	protein_coding	Foxm1	ENSMUST00000112148	protein_coding	alternative2	6	1	128365705	2229
ENSMUSG00000086259	antisense	Tmem150cos	ENSMUST00000143245	antisense		5	1	100077962	1216
ENSMUSG00000034801	protein_coding	Sos2	ENSMUST00000183277	protein_coding	alternative1	12	-1	69681841	4512
ENSMUSG00000039682	protein_coding	Lap3	ENSMUST00000135413	retained_intron		5	1	45498230	795
ENSMUSG00000086259	antisense	Tmem150cos	ENSMUST00000154539	antisense		5	1	100091897	1372
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000151885	processed_transcript		7	-1	78377822	866
ENSMUSG00000021614	protein_coding	Vcan	ENSMUST00000109546	protein_coding		13	-1	89742509	12427
ENSMUSG00000039682	protein_coding	Lap3	ENSMUST00000131289	retained_intron		5	1	45500339	466
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000206599	nonsense_mediated_decay		7	-1	78356133	224
ENSMUSG00000034801	protein_coding	Sos2	ENSMUST00000182396	protein_coding		12	-1	69681627	3963
ENSMUSG00000039682	protein_coding	Lap3	ENSMUST00000146811	retained_intron		5	1	45509209	575
ENSMUSG00000085582	lincRNA	3110099E03Rik	ENSMUST00000134580	lincRNA		2	-1	115512201	2644
ENSMUSG00000001517	protein_coding	Foxm1	ENSMUST00000203040	protein_coding	alternative2	6	1	128366167	1207
ENSMUSG00000044041	protein_coding	Krt13	ENSMUST00000007275	protein_coding	principal1	11	-1	100121566	1654
ENSMUSG00000001517	protein_coding	Foxm1	ENSMUST00000203258	protein_coding	alternative2	6	1	128367287	641
ENSMUSG00000095063	protein_coding	Slx	ENSMUST00000096913	protein_coding	principal1	X	-1	26545565	925
ENSMUSG00000020628	protein_coding	Trappc12	ENSMUST00000223552	retained_intron		12	-1	28750429	2614
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000205312	processed_transcript		7	-1	78452123	364
ENSMUSG00000034801	protein_coding	Sos2	ENSMUST00000182646	retained_intron		12	-1	69588806	475
ENSMUSG00000001517	protein_coding	Foxm1	ENSMUST00000125456	retained_intron		6	1	128367365	598
ENSMUSG00000078810	protein_coding	Gp6	ENSMUST00000206928	protein_coding	principal2	7	-1	4397744	5900
ENSMUSG00000044041	protein_coding	Krt13	ENSMUST00000134282	retained_intron		11	-1	100118834	207
ENSMUSG00000034801	protein_coding	Sos2	ENSMUST00000182838	retained_intron		12	-1	69596822	2417
ENSMUSG00000085582	lincRNA	3110099E03Rik	ENSMUST00000143695	lincRNA		2	-1	115527744	1353
ENSMUSG00000001517	protein_coding	Foxm1	ENSMUST00000136395	retained_intron		6	1	128369440	460
ENSMUSG00000034801	protein_coding	Sos2	ENSMUST00000183306	retained_intron		12	-1	69617119	661
ENSMUSG00000085582	lincRNA	3110099E03Rik	ENSMUST00000125147	lincRNA		2	-1	115512207	508
ENSMUSG00000078810	protein_coding	Gp6	ENSMUST00000108590	protein_coding	alternative2	7	-1	4397728	965
ENSMUSG00000001517	protein_coding	Foxm1	ENSMUST00000153423	retained_intron		6	1	128370959	821
ENSMUSG00000044041	protein_coding	Krt13	ENSMUST00000128934	processed_transcript		11	-1	100120577	512
ENSMUSG00000086735	antisense	Gm13977	ENSMUST00000133648	antisense		2	-1	115581555	4049
ENSMUSG00000118136	lincRNA	Gm50312	ENSMUST00000235985	lincRNA		17	1	25698854	671
ENSMUSG00000092187	antisense	Gm20457	ENSMUST00000173374	antisense		7	-1	64345964	682
ENSMUSG00000021614	protein_coding	Vcan	ENSMUST00000109543	protein_coding	principal1	13	-1	89742244	2321
ENSMUSG00000102502	IG_V_pseudogene	Ighv1-10	ENSMUST00000194372	IG_V_pseudogene		12	-1	114598326	355
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000171164	protein_coding		1	1	64532797	1287
ENSMUSG00000117657	processed_pseudogene	Gm5836	ENSMUST00000236265	processed_pseudogene		17	1	25705049	774
ENSMUSG00000020628	protein_coding	Trappc12	ENSMUST00000170994	protein_coding		12	-1	28750377	2818
ENSMUSG00000094006	IG_V_gene	Igkv4-59	ENSMUST00000103354	IG_V_gene	principal1	6	-1	69438757	368
ENSMUSG00000054418	processed_transcript	2900041M22Rik	ENSMUST00000155384	processed_transcript		11	1	117611247	1784
ENSMUSG00000081000	processed_pseudogene	Gm11200	ENSMUST00000121698	processed_pseudogene		11	1	79212796	448
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000155795	retained_intron		7	-1	78577975	2850
ENSMUSG00000104075	TEC	5430433H01Rik	ENSMUST00000193978	TEC		3	1	51582306	542
ENSMUSG00000102787	lincRNA	Gm30174	ENSMUST00000191682	lincRNA		Y	1	14220904	537
ENSMUSG00000104679	IG_V_pseudogene	Igkv4-60	ENSMUST00000200639	IG_V_pseudogene		6	-1	69463725	358
ENSMUSG00000102787	lincRNA	Gm30174	ENSMUST00000193415	lincRNA		Y	1	14220904	352
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000206167	processed_transcript		7	-1	78571891	390
ENSMUSG00000030522	protein_coding	Mtmr10	ENSMUST00000206732	retained_intron		7	1	64287653	3093
ENSMUSG00000104166	processed_pseudogene	Gm38247	ENSMUST00000194675	processed_pseudogene		3	-1	51636928	433
ENSMUSG00000108761	processed_pseudogene	Atp6v0c-ps1	ENSMUST00000206596	processed_pseudogene		7	1	4412438	463
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000188855	retained_intron		1	1	64532804	660
ENSMUSG00000056055	protein_coding	Sag	ENSMUST00000130886	retained_intron		1	1	87803680	1886
ENSMUSG00000020628	protein_coding	Trappc12	ENSMUST00000223447	retained_intron		12	-1	28750382	4264
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000187811	protein_coding		1	1	64532809	1255
ENSMUSG00000102888	IG_V_gene	Ighv1-11	ENSMUST00000191801	IG_V_gene	principal1	12	-1	114612675	351
ENSMUSG00000069236	processed_pseudogene	Gm7251	ENSMUST00000182661	processed_pseudogene		13	-1	49805952	1009
ENSMUSG00000020628	protein_coding	Trappc12	ENSMUST00000221335	retained_intron		12	-1	28750466	3718
ENSMUSG00000026924	protein_coding	Sec16a	ENSMUST00000156442	protein_coding		2	-1	26429512	4176
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000205700	processed_transcript		7	-1	78623342	431
ENSMUSG00000113254	processed_pseudogene	Gm272	ENSMUST00000222073	processed_pseudogene		13	1	49820728	919
ENSMUSG00000056055	protein_coding	Sag	ENSMUST00000155393	retained_intron		1	1	87803680	1668
ENSMUSG00000021614	protein_coding	Vcan	ENSMUST00000109544	protein_coding		13	-1	89742334	5702
ENSMUSG00000056055	protein_coding	Sag	ENSMUST00000128761	retained_intron		1	1	87803680	4727
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000206268	protein_coding		7	-1	78578403	426
ENSMUSG00000104499	lincRNA	Gm30353	ENSMUST00000195486	lincRNA		Y	1	14282472	622
ENSMUSG00000104499	lincRNA	Gm30353	ENSMUST00000192218	lincRNA		Y	1	14282472	437
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000049932	protein_coding	principal4	1	1	64532809	5009
ENSMUSG00000095633	IG_V_gene	Igkv4-58	ENSMUST00000197448	IG_V_gene		6	-1	69500786	358
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000206091	protein_coding		7	-1	78657724	423
ENSMUSG00000021614	protein_coding	Vcan	ENSMUST00000162715	protein_coding		13	-1	89740397	615
ENSMUSG00000050545	protein_coding	Fam228b	ENSMUST00000053458	protein_coding	principal2	12	-1	4769232	2851
ENSMUSG00000095633	IG_V_gene	Igkv4-58	ENSMUST00000103355	IG_V_gene	principal1	6	-1	69500545	292
ENSMUSG00000020628	protein_coding	Trappc12	ENSMUST00000020954	protein_coding	principal1	12	-1	28750453	3377
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000206949	processed_transcript		7	-1	78578698	435
ENSMUSG00000113530	processed_pseudogene	Gm8672	ENSMUST00000221200	processed_pseudogene		13	-1	49864129	332
ENSMUSG00000037681	protein_coding	Esyt3	ENSMUST00000042158	protein_coding	principal1	9	-1	99358518	4483
ENSMUSG00000113333	processed_pseudogene	Gm19011	ENSMUST00000221777	processed_pseudogene		13	1	49882957	808
ENSMUSG00000050545	protein_coding	Fam228b	ENSMUST00000218199	nonsense_mediated_decay		12	-1	4768998	2709
ENSMUSG00000021614	protein_coding	Vcan	ENSMUST00000160740	protein_coding		13	-1	89678121	861
ENSMUSG00000104551	IG_V_pseudogene	Igkv13-57-2	ENSMUST00000196590	IG_V_pseudogene		6	1	69523554	336
ENSMUSG00000021614	protein_coding	Vcan	ENSMUST00000159285	protein_coding		13	-1	89678908	294
ENSMUSG00000043441	protein_coding	Gpr149	ENSMUST00000058535	protein_coding	principal1	3	-1	62605140	4222
ENSMUSG00000050545	protein_coding	Fam228b	ENSMUST00000218575	protein_coding	alternative2	12	-1	4769267	1281
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000156406	retained_intron		4	1	107066988	2590
ENSMUSG00000092579	protein_coding	Vmn1r62	ENSMUST00000237772	protein_coding	principal1	7	1	5673631	1572
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000206849	processed_transcript		7	-1	78718220	3091
ENSMUSG00000010122	protein_coding	Slc47a1	ENSMUST00000010267	protein_coding	principal1	11	-1	61378081	2639
ENSMUSG00000043441	protein_coding	Gpr149	ENSMUST00000149007	retained_intron		3	-1	62602774	708
ENSMUSG00000071788	protein_coding	Gm14525	ENSMUST00000119649	protein_coding	principal1	X	-1	26702638	893
ENSMUSG00000021474	protein_coding	Sfxn1	ENSMUST00000021930	protein_coding	principal1	13	1	54071869	2783
ENSMUSG00000092579	protein_coding	Vmn1r62	ENSMUST00000173956	protein_coding	principal1	7	1	5673631	2102
ENSMUSG00000076555	IG_V_gene	Igkv4-57-1	ENSMUST00000103356	IG_V_gene	principal1	6	-1	69544907	373
ENSMUSG00000034786	protein_coding	Gpsm3	ENSMUST00000038244	protein_coding	principal1	17	1	34589806	1343
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000087366	protein_coding	alternative1	1	1	64532819	8364
ENSMUSG00000083073	processed_pseudogene	Gm11845	ENSMUST00000117886	processed_pseudogene		4	1	15154392	327
ENSMUSG00000096907	unprocessed_pseudogene	Gm6113	ENSMUST00000180319	unprocessed_pseudogene		X	-1	26756219	639
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000206877	processed_transcript		7	-1	78738010	1435
ENSMUSG00000021474	protein_coding	Sfxn1	ENSMUST00000223504	retained_intron		13	1	54085946	3929
ENSMUSG00000021474	protein_coding	Sfxn1	ENSMUST00000222285	retained_intron		13	1	54092711	3514
ENSMUSG00000113782	processed_pseudogene	Gm48009	ENSMUST00000222307	processed_pseudogene		13	-1	49892868	2446
ENSMUSG00000026024	protein_coding	Als2	ENSMUST00000027178	protein_coding	principal1	1	-1	59237231	6342
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000206752	processed_transcript		7	-1	78658109	511
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000206500	processed_transcript		7	-1	78738012	1115
ENSMUSG00000105369	IG_V_pseudogene	Igkv13-57-1	ENSMUST00000198063	IG_V_pseudogene		6	1	69569737	305
ENSMUSG00000059146	protein_coding	Ntrk3	ENSMUST00000205411	processed_transcript		7	-1	78738012	1549
ENSMUSG00000093976	processed_pseudogene	Gm8674	ENSMUST00000179367	processed_pseudogene		13	-1	49904597	3047
ENSMUSG00000034786	protein_coding	Gpsm3	ENSMUST00000150924	nonsense_mediated_decay		17	1	34590092	1019
ENSMUSG00000052629	antisense	Gm9885	ENSMUST00000186234	antisense		7	1	78578830	2209
ENSMUSG00000052629	antisense	Gm9885	ENSMUST00000064591	antisense		7	1	78578830	2205
ENSMUSG00000034786	protein_coding	Gpsm3	ENSMUST00000173772	protein_coding		17	1	34590231	501
ENSMUSG00000094886	processed_pseudogene	Gm10784	ENSMUST00000178715	processed_pseudogene		13	-1	49945333	238
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000186335	processed_transcript		1	1	64532832	1288
ENSMUSG00000026024	protein_coding	Als2	ENSMUST00000163058	protein_coding	principal1	1	-1	59237093	5379
ENSMUSG00000108788	antisense	4921513I08Rik	ENSMUST00000206993	antisense		7	1	78254296	866
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000190876	nonsense_mediated_decay		1	1	64532859	1420
ENSMUSG00000108630	TEC	Gm44607	ENSMUST00000205611	TEC		7	-1	78212699	1090
ENSMUSG00000100811	antisense	Gm29083	ENSMUST00000189205	antisense		1	-1	62718073	733
ENSMUSG00000108390	sense_intronic	Gm39038	ENSMUST00000206774	sense_intronic		7	-1	78575232	355
ENSMUSG00000103032	TEC	Gm37121	ENSMUST00000192219	TEC		1	1	62809302	2556
ENSMUSG00000118216	lincRNA	Gm19784	ENSMUST00000237328	lincRNA		18	-1	66949961	2670
ENSMUSG00000055789	protein_coding	Ftdc2	ENSMUST00000053249	protein_coding	principal1	16	-1	58638739	1108
ENSMUSG00000118216	lincRNA	Gm19784	ENSMUST00000237895	lincRNA		18	-1	66950023	659
ENSMUSG00000114826	bidirectional_promoter_lncRNA	Gm10000	ENSMUST00000232932	bidirectional_promoter_lncRNA		12	1	104473331	4429
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000239239	protein_coding	alternative2	4	-1	116371732	5188
ENSMUSG00000114826	bidirectional_promoter_lncRNA	Gm10000	ENSMUST00000224847	bidirectional_promoter_lncRNA		12	1	104474488	3002
ENSMUSG00000028687	protein_coding	Mutyh	ENSMUST00000102699	protein_coding	principal1	4	1	116807723	1654
ENSMUSG00000118216	lincRNA	Gm19784	ENSMUST00000235553	lincRNA		18	-1	66949975	671
ENSMUSG00000101157	protein_coding	Gm20905	ENSMUST00000190782	protein_coding	principal1	Y	-1	37259603	923
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000190348	protein_coding	principal4	1	1	64532894	1260
ENSMUSG00000103764	processed_pseudogene	Gm18382	ENSMUST00000194394	processed_pseudogene		3	1	62761443	582
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000239177	protein_coding	alternative2	4	-1	116371734	5406
ENSMUSG00000010122	protein_coding	Slc47a1	ENSMUST00000131723	nonsense_mediated_decay		11	-1	61378064	2987
ENSMUSG00000109540	processed_pseudogene	Gm44821	ENSMUST00000208212	processed_pseudogene		7	-1	5763417	2002
ENSMUSG00000026024	protein_coding	Als2	ENSMUST00000159166	retained_intron		1	-1	59237231	2977
ENSMUSG00000112954	lincRNA	Gm49732	ENSMUST00000220520	lincRNA		12	1	104509198	801
ENSMUSG00000116579	lincRNA	Gm49701	ENSMUST00000231734	lincRNA		16	-1	58655244	715
ENSMUSG00000117798	lincRNA	Gm50164	ENSMUST00000237275	lincRNA		18	1	66974165	2593
ENSMUSG00000112954	lincRNA	Gm49732	ENSMUST00000222329	lincRNA		12	1	104519968	757
ENSMUSG00000010122	protein_coding	Slc47a1	ENSMUST00000147583	processed_transcript		11	-1	61365652	567
ENSMUSG00000028687	protein_coding	Mutyh	ENSMUST00000130359	protein_coding		4	1	116807725	351
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000187035	retained_intron		1	1	64560925	1642
ENSMUSG00000063001	processed_pseudogene	Gm9701	ENSMUST00000077976	processed_pseudogene		3	-1	62924233	427
ENSMUSG00000025958	protein_coding	Creb1	ENSMUST00000190979	retained_intron		1	1	64576388	2763
ENSMUSG00000104811	lincRNA	Gm33093	ENSMUST00000197751	lincRNA		5	-1	11254753	790
ENSMUSG00000026024	protein_coding	Als2	ENSMUST00000160945	protein_coding		1	-1	59237226	521
ENSMUSG00000010122	protein_coding	Slc47a1	ENSMUST00000148671	protein_coding		11	-1	61378345	826
ENSMUSG00000026024	protein_coding	Als2	ENSMUST00000188469	retained_intron		1	-1	59219126	2783
ENSMUSG00000080725	protein_coding	Gm6121	ENSMUST00000119231	protein_coding	principal1	X	-1	26935697	924
ENSMUSG00000106708	lincRNA	Gm43782	ENSMUST00000202790	lincRNA		5	-1	118877465	229
ENSMUSG00000026924	protein_coding	Sec16a	ENSMUST00000114082	protein_coding	alternative2	2	-1	26445214	8797
ENSMUSG00000043592	protein_coding	Unc5cl	ENSMUST00000074574	protein_coding	principal1	17	1	48454901	2838
ENSMUSG00000080725	protein_coding	Gm6121	ENSMUST00000167438	protein_coding	principal1	X	-1	26935669	893
ENSMUSG00000106745	lincRNA	Gm43342	ENSMUST00000201027	lincRNA		5	1	118928123	924
ENSMUSG00000026924	protein_coding	Sec16a	ENSMUST00000149010	processed_transcript		2	-1	26413052	882
ENSMUSG00000058631	protein_coding	Vmn1r63	ENSMUST00000075085	protein_coding	principal1	7	-1	5805445	2172
ENSMUSG00000042707	protein_coding	Dnali1	ENSMUST00000036383	protein_coding	principal1	4	-1	125065703	2133
ENSMUSG00000043592	protein_coding	Unc5cl	ENSMUST00000161587	nonsense_mediated_decay		17	1	48462335	1786
ENSMUSG00000026924	protein_coding	Sec16a	ENSMUST00000154486	processed_transcript		2	-1	26416230	760
ENSMUSG00000043592	protein_coding	Unc5cl	ENSMUST00000162313	nonsense_mediated_decay		17	1	48462360	782
ENSMUSG00000080934	processed_pseudogene	Gm12931	ENSMUST00000117046	processed_pseudogene		4	1	125019500	324
ENSMUSG00000022498	protein_coding	Txndc11	ENSMUST00000038424	protein_coding	principal1	16	-1	11134650	3095
ENSMUSG00000048400	protein_coding	Prss54	ENSMUST00000212513	processed_transcript		8	-1	95576340	1694
ENSMUSG00000026924	protein_coding	Sec16a	ENSMUST00000148306	processed_transcript		2	-1	26419756	712
ENSMUSG00000037681	protein_coding	Esyt3	ENSMUST00000186626	retained_intron		9	-1	99322703	563
ENSMUSG00000029204	protein_coding	Rhoh	ENSMUST00000031106	protein_coding	principal1	5	1	65861213	5093
ENSMUSG00000043592	protein_coding	Unc5cl	ENSMUST00000162132	protein_coding		17	1	48462366	426
ENSMUSG00000022498	protein_coding	Txndc11	ENSMUST00000148183	retained_intron		16	-1	11084785	877
ENSMUSG00000026924	protein_coding	Sec16a	ENSMUST00000153996	protein_coding		2	-1	26439755	740
ENSMUSG00000037681	protein_coding	Esyt3	ENSMUST00000187520	protein_coding		9	-1	99325010	595
ENSMUSG00000022498	protein_coding	Txndc11	ENSMUST00000146081	processed_transcript		16	-1	11087352	600
ENSMUSG00000056055	protein_coding	Sag	ENSMUST00000077772	protein_coding	principal2	1	1	87803680	1719
ENSMUSG00000020890	protein_coding	Gucy2e	ENSMUST00000108665	protein_coding	principal1	11	-1	69237022	3645
ENSMUSG00000037681	protein_coding	Esyt3	ENSMUST00000187365	retained_intron		9	-1	99338915	352
ENSMUSG00000026924	protein_coding	Sec16a	ENSMUST00000155252	processed_transcript		2	-1	26445200	430
ENSMUSG00000037681	protein_coding	Esyt3	ENSMUST00000190002	retained_intron		9	-1	99358557	2959
ENSMUSG00000043592	protein_coding	Unc5cl	ENSMUST00000161418	nonsense_mediated_decay		17	1	48462384	1696
ENSMUSG00000026924	protein_coding	Sec16a	ENSMUST00000091252	protein_coding	principal2	2	-1	26445216	8737
ENSMUSG00000022498	protein_coding	Txndc11	ENSMUST00000118362	protein_coding		16	-1	11134611	4248
ENSMUSG00000103452	TEC	1700008A23Rik	ENSMUST00000191694	TEC		9	1	99322826	691
ENSMUSG00000056055	protein_coding	Sag	ENSMUST00000144334	processed_transcript		1	1	87812164	774
ENSMUSG00000043592	protein_coding	Unc5cl	ENSMUST00000162467	nonsense_mediated_decay		17	1	48462404	575
ENSMUSG00000114800	lincRNA	Gm31600	ENSMUST00000225061	lincRNA		13	1	37761748	637
ENSMUSG00000114800	lincRNA	Gm31600	ENSMUST00000224394	lincRNA		13	1	37761797	3943
ENSMUSG00000022498	protein_coding	Txndc11	ENSMUST00000145225	nonsense_mediated_decay		16	-1	11134573	2381
ENSMUSG00000100123	lincRNA	Gm28087	ENSMUST00000189195	lincRNA		9	1	99367033	767
ENSMUSG00000056055	protein_coding	Sag	ENSMUST00000136708	processed_transcript		1	1	87820707	857
ENSMUSG00000020890	protein_coding	Gucy2e	ENSMUST00000108664	protein_coding	principal1	11	-1	69237036	4415
ENSMUSG00000104944	processed_pseudogene	Gm43405	ENSMUST00000198642	processed_pseudogene		3	-1	110277472	337
ENSMUSG00000043252	protein_coding	Tmem64	ENSMUST00000062684	protein_coding	principal1	4	1	15265831	4670
ENSMUSG00000029204	protein_coding	Rhoh	ENSMUST00000201533	protein_coding	principal1	5	1	65863007	2265
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000106484	protein_coding	alternative2	4	-1	116463751	5292
ENSMUSG00000056055	protein_coding	Sag	ENSMUST00000145385	retained_intron		1	1	87826488	2983
ENSMUSG00000022498	protein_coding	Txndc11	ENSMUST00000131012	processed_transcript		16	-1	11122737	680
ENSMUSG00000112945	bidirectional_promoter_lncRNA	Gm32151	ENSMUST00000223521	bidirectional_promoter_lncRNA		12	1	70347462	915
ENSMUSG00000025969	protein_coding	Nrp2	ENSMUST00000126344	retained_intron		1	1	62703285	2815
ENSMUSG00000056055	protein_coding	Sag	ENSMUST00000177757	protein_coding	alternative2	1	1	87803680	1584
ENSMUSG00000025571	protein_coding	Tnrc6c	ENSMUST00000141115	retained_intron		11	1	117654573	11590
ENSMUSG00000029204	protein_coding	Rhoh	ENSMUST00000202591	processed_transcript		5	1	65863580	451
ENSMUSG00000030522	protein_coding	Mtmr10	ENSMUST00000032736	protein_coding	principal1	7	1	64287670	5205
ENSMUSG00000029204	protein_coding	Rhoh	ENSMUST00000202471	retained_intron		5	1	65863618	4781
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000003908	protein_coding	alternative2	4	-1	116463922	5445
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000106758	protein_coding	principal1	4	1	107066988	2516
ENSMUSG00000028869	protein_coding	Gnl2	ENSMUST00000106176	protein_coding		4	1	125016585	690
ENSMUSG00000113694	antisense	Gm48747	ENSMUST00000222173	antisense		12	1	70251165	785
ENSMUSG00000020890	protein_coding	Gucy2e	ENSMUST00000155457	processed_transcript		11	-1	69237022	3210
ENSMUSG00000107254	TEC	Gm43769	ENSMUST00000201871	TEC		5	1	65911624	4323
ENSMUSG00000022498	protein_coding	Txndc11	ENSMUST00000155221	nonsense_mediated_decay		16	-1	11134553	563
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000128713	processed_transcript		4	-1	116309205	886
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000145324	protein_coding		4	1	107066996	376
ENSMUSG00000020890	protein_coding	Gucy2e	ENSMUST00000021259	protein_coding	principal1	11	-1	69237022	8331
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000131809	processed_transcript		4	-1	116310801	712
ENSMUSG00000048400	protein_coding	Prss54	ENSMUST00000213096	protein_coding	alternative2	8	-1	95575455	1501
ENSMUSG00000022498	protein_coding	Txndc11	ENSMUST00000147884	nonsense_mediated_decay		16	-1	11134650	1145
ENSMUSG00000031372	protein_coding	Trex2	ENSMUST00000033738	protein_coding	principal1	X	-1	73435344	1017
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000147459	processed_transcript		4	-1	116310648	346
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000106760	protein_coding		4	1	107066996	840
ENSMUSG00000022498	protein_coding	Txndc11	ENSMUST00000118679	protein_coding		16	-1	11134613	3523
ENSMUSG00000048400	protein_coding	Prss54	ENSMUST00000212368	processed_transcript		8	-1	95576281	301
ENSMUSG00000105859	processed_pseudogene	Gm19185	ENSMUST00000196365	processed_pseudogene		3	1	110399131	643
ENSMUSG00000024960	protein_coding	Plcb3	ENSMUST00000237808	protein_coding		19	-1	6957713	1986
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000123761	processed_transcript		4	-1	116316076	794
ENSMUSG00000047719	protein_coding	Ubiad1	ENSMUST00000051633	protein_coding	principal1	4	-1	148444771	2992
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000156884	processed_transcript		4	-1	116317760	822
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000149453	nonsense_mediated_decay		4	1	107067019	5471
ENSMUSG00000028687	protein_coding	Mutyh	ENSMUST00000124857	retained_intron		4	1	116807738	1931
ENSMUSG00000048400	protein_coding	Prss54	ENSMUST00000052690	protein_coding	principal2	8	-1	95575455	1438
ENSMUSG00000030522	protein_coding	Mtmr10	ENSMUST00000206452	nonsense_mediated_decay		7	1	64287782	2477
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000154283	protein_coding		4	1	107067024	360
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000159893	nonsense_mediated_decay		13	-1	14039579	1626
ENSMUSG00000028687	protein_coding	Mutyh	ENSMUST00000140680	retained_intron		4	1	116807748	2047
ENSMUSG00000030522	protein_coding	Mtmr10	ENSMUST00000206680	nonsense_mediated_decay		7	1	64300633	668
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000030364	protein_coding		4	1	107068605	2360
ENSMUSG00000038039	protein_coding	Gcc2	ENSMUST00000057659	protein_coding	principal2	10	1	58255497	6547
ENSMUSG00000048400	protein_coding	Prss54	ENSMUST00000180075	protein_coding	alternative2	8	-1	95575197	1152
ENSMUSG00000028687	protein_coding	Mutyh	ENSMUST00000155346	nonsense_mediated_decay		4	1	116814319	1483
ENSMUSG00000047719	protein_coding	Ubiad1	ENSMUST00000156686	processed_transcript		4	-1	148444761	576
ENSMUSG00000108472	TEC	Gm45212	ENSMUST00000205831	TEC		7	-1	64288210	3403
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000160510	retained_intron		13	-1	14001597	871
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000126207	nonsense_mediated_decay		4	1	107068643	4600
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000147262	processed_transcript		4	-1	116327826	657
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000137269	protein_coding		4	1	107070870	555
ENSMUSG00000028687	protein_coding	Mutyh	ENSMUST00000138056	retained_intron		4	1	116814377	815
ENSMUSG00000047459	protein_coding	Dynlrb1	ENSMUST00000054912	processed_transcript		2	1	155236533	677
ENSMUSG00000033082	protein_coding	Clec1a	ENSMUST00000203162	protein_coding		6	-1	129452000	5128
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000160553	retained_intron		13	-1	14005504	978
ENSMUSG00000086196	antisense	Gm13571	ENSMUST00000151984	antisense		2	1	60338188	2127
ENSMUSG00000028687	protein_coding	Mutyh	ENSMUST00000135449	retained_intron		4	1	116817698	689
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000128252	processed_transcript		4	-1	116330696	759
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000127916	protein_coding		4	1	107080993	583
ENSMUSG00000086196	antisense	Gm13571	ENSMUST00000124654	antisense		2	1	60355352	1381
ENSMUSG00000038039	protein_coding	Gcc2	ENSMUST00000162984	nonsense_mediated_decay		10	1	58255508	570
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000123072	protein_coding		4	-1	116405986	1195
ENSMUSG00000113697	TEC	Gm47890	ENSMUST00000223069	TEC		13	1	72702849	2544
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000144281	protein_coding		4	-1	116406002	1033
ENSMUSG00000028621	protein_coding	Cyb5rl	ENSMUST00000106756	protein_coding		4	1	107070168	1604
ENSMUSG00000038039	protein_coding	Gcc2	ENSMUST00000162041	protein_coding	alternative2	10	1	58255530	6230
ENSMUSG00000113984	TEC	Gm48890	ENSMUST00000220775	TEC		13	1	9328630	1618
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000237862	protein_coding		19	-1	4012694	1619
ENSMUSG00000113065	TEC	Gm48870	ENSMUST00000222138	TEC		13	1	9344402	4024
ENSMUSG00000068262	processed_pseudogene	Gm5879	ENSMUST00000089501	processed_pseudogene		6	-1	87766204	1209
ENSMUSG00000112955	TEC	Gm48889	ENSMUST00000221027	TEC		13	1	9412517	2644
ENSMUSG00000019214	protein_coding	Chtf18	ENSMUST00000170575	nonsense_mediated_decay		17	-1	25727371	3421
ENSMUSG00000113922	TEC	Gm48887	ENSMUST00000221638	TEC		13	1	9321427	1553
ENSMUSG00000042243	protein_coding	BC051665	ENSMUST00000026078	protein_coding	principal1	13	-1	60786364	1348
ENSMUSG00000107849	lincRNA	Gm43904	ENSMUST00000204945	lincRNA		6	1	87776143	379
ENSMUSG00000038039	protein_coding	Gcc2	ENSMUST00000162860	protein_coding	alternative2	10	1	58255539	6400
ENSMUSG00000033082	protein_coding	Clec1a	ENSMUST00000037481	protein_coding	principal1	6	-1	129451859	3123
ENSMUSG00000113869	processed_pseudogene	Gm48869	ENSMUST00000222099	processed_pseudogene		13	1	9352028	662
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000134460	processed_transcript		4	-1	116406807	773
ENSMUSG00000113905	TEC	Gm48872	ENSMUST00000221729	TEC		13	1	9557861	4129
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000134479	protein_coding		19	-1	4012666	1438
ENSMUSG00000038039	protein_coding	Gcc2	ENSMUST00000160427	protein_coding		10	1	58255713	502
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000151347	processed_transcript		4	-1	116435586	687
ENSMUSG00000033082	protein_coding	Clec1a	ENSMUST00000204012	protein_coding		6	-1	129451851	630
ENSMUSG00000038039	protein_coding	Gcc2	ENSMUST00000161570	processed_transcript		10	1	58255891	268
ENSMUSG00000033082	protein_coding	Clec1a	ENSMUST00000204952	nonsense_mediated_decay		6	-1	129451835	692
ENSMUSG00000038039	protein_coding	Gcc2	ENSMUST00000160677	retained_intron		10	1	58273446	2750
ENSMUSG00000034673	protein_coding	Pbx2	ENSMUST00000173328	protein_coding		17	1	34591266	1990
ENSMUSG00000038039	protein_coding	Gcc2	ENSMUST00000160416	protein_coding		10	1	58274957	545
ENSMUSG00000030054	protein_coding	Gp9	ENSMUST00000032133	protein_coding	principal1	6	1	87778072	881
ENSMUSG00000028869	protein_coding	Gnl2	ENSMUST00000030684	protein_coding	principal1	4	1	125029992	2366
ENSMUSG00000107144	lincRNA	4930413E15Rik	ENSMUST00000202500	lincRNA		5	1	118952339	1290
ENSMUSG00000038039	protein_coding	Gcc2	ENSMUST00000160636	retained_intron		10	1	58285927	836
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000106486	protein_coding	principal4	4	-1	116464183	5723
ENSMUSG00000107371	TEC	Gm43784	ENSMUST00000202922	TEC		5	-1	118996996	2436
ENSMUSG00000092528	transcribed_unprocessed_pseudogene	Nlrp1c-ps	ENSMUST00000174668	transcribed_unprocessed_pseudogene		11	-1	71281219	3422
ENSMUSG00000003810	protein_coding	Mast2	ENSMUST00000106485	protein_coding	alternative2	4	-1	116464183	5705
ENSMUSG00000028869	protein_coding	Gnl2	ENSMUST00000136910	processed_transcript		4	1	125030058	765
ENSMUSG00000038039	protein_coding	Gcc2	ENSMUST00000162965	retained_intron		10	1	58298410	1952
ENSMUSG00000092528	transcribed_unprocessed_pseudogene	Nlrp1c-ps	ENSMUST00000171546	processed_transcript		11	-1	71285232	3457
ENSMUSG00000100573	lincRNA	1700081H04Rik	ENSMUST00000190550	lincRNA		5	1	119108234	1128
ENSMUSG00000101817	unprocessed_pseudogene	Gm28288	ENSMUST00000191019	unprocessed_pseudogene		7	-1	47708877	214
ENSMUSG00000028869	protein_coding	Gnl2	ENSMUST00000125078	processed_transcript		4	1	125040958	471
ENSMUSG00000028869	protein_coding	Gnl2	ENSMUST00000147390	processed_transcript		4	1	125043232	625
ENSMUSG00000099603	unprocessed_pseudogene	Mrgprc3-ps	ENSMUST00000189876	unprocessed_pseudogene		7	-1	47719524	955
ENSMUSG00000037029	protein_coding	Zfp146	ENSMUST00000062181	protein_coding	principal1	7	-1	30169727	2029
ENSMUSG00000047459	protein_coding	Dynlrb1	ENSMUST00000109682	protein_coding	principal1	2	1	155236535	684
ENSMUSG00000111159	protein_coding	Olfr1337	ENSMUST00000077247	protein_coding	principal1	4	-1	118782586	951
ENSMUSG00000040282	protein_coding	BC052040	ENSMUST00000110918	protein_coding	principal1	2	1	115581733	2735
ENSMUSG00000030870	protein_coding	Ubfd1	ENSMUST00000033158	protein_coding	principal1	7	1	122067175	4849
ENSMUSG00000028869	protein_coding	Gnl2	ENSMUST00000147550	processed_transcript		4	1	125053151	667
ENSMUSG00000092492	processed_transcript	B230208B08Rik	ENSMUST00000173049	processed_transcript		4	1	78211955	404
ENSMUSG00000080780	processed_pseudogene	Gm11252	ENSMUST00000120572	processed_pseudogene		4	1	76393154	939
ENSMUSG00000101739	unprocessed_pseudogene	Gm5733	ENSMUST00000190232	unprocessed_pseudogene		7	-1	47733940	939
ENSMUSG00000037029	protein_coding	Zfp146	ENSMUST00000136508	processed_transcript		7	-1	30169691	585
ENSMUSG00000030870	protein_coding	Ubfd1	ENSMUST00000148060	retained_intron		7	1	122067208	3300
ENSMUSG00000040282	protein_coding	BC052040	ENSMUST00000147968	processed_transcript		2	1	115581801	1936
ENSMUSG00000008301	protein_coding	Phax	ENSMUST00000130163	protein_coding	alternative2	18	1	56562443	1386
ENSMUSG00000047459	protein_coding	Dynlrb1	ENSMUST00000150602	protein_coding		2	1	155236608	788
ENSMUSG00000097522	lincRNA	Gm26844	ENSMUST00000181690	lincRNA		13	1	69141229	673
ENSMUSG00000030870	protein_coding	Ubfd1	ENSMUST00000133390	retained_intron		7	1	122067440	3001
ENSMUSG00000037029	protein_coding	Zfp146	ENSMUST00000208923	retained_intron		7	-1	30169750	1263
ENSMUSG00000008301	protein_coding	Phax	ENSMUST00000132628	protein_coding		18	1	56562593	751
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000042497	protein_coding	principal1	19	-1	4012806	1661
ENSMUSG00000030870	protein_coding	Ubfd1	ENSMUST00000124733	processed_transcript		7	1	122067447	610
ENSMUSG00000022494	protein_coding	Shisa9	ENSMUST00000182889	processed_transcript		16	1	11984113	1196
ENSMUSG00000034673	protein_coding	Pbx2	ENSMUST00000038149	protein_coding	principal1	17	1	34592263	3068
ENSMUSG00000022494	protein_coding	Shisa9	ENSMUST00000232469	processed_transcript		16	1	11984458	951
ENSMUSG00000040282	protein_coding	BC052040	ENSMUST00000166472	protein_coding		2	1	115581716	2770
ENSMUSG00000029410	protein_coding	Ppef2	ENSMUST00000201130	protein_coding	principal1	5	-1	92256278	2878
ENSMUSG00000030870	protein_coding	Ubfd1	ENSMUST00000153640	nonsense_mediated_decay		7	1	122068899	599
ENSMUSG00000047459	protein_coding	Dynlrb1	ENSMUST00000135831	processed_transcript		2	1	155236811	534
ENSMUSG00000102270	processed_pseudogene	Gm8388	ENSMUST00000193000	processed_pseudogene		3	-1	63173861	756
ENSMUSG00000034673	protein_coding	Pbx2	ENSMUST00000183827	protein_coding		17	1	34592734	1186
ENSMUSG00000029410	protein_coding	Ppef2	ENSMUST00000201236	processed_transcript		5	-1	92229021	732
ENSMUSG00000105121	processed_pseudogene	Gm43406	ENSMUST00000200356	processed_pseudogene		3	-1	110564401	334
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000237129	nonsense_mediated_decay		19	-1	4012668	1509
ENSMUSG00000106650	TEC	Gm43404	ENSMUST00000200424	TEC		3	1	110634323	2534
ENSMUSG00000034673	protein_coding	Pbx2	ENSMUST00000174532	protein_coding		17	1	34593395	645
ENSMUSG00000008301	protein_coding	Phax	ENSMUST00000008445	protein_coding	principal3	18	1	56572822	1942
ENSMUSG00000034673	protein_coding	Pbx2	ENSMUST00000173229	retained_intron		17	1	34595460	659
ENSMUSG00000106487	processed_pseudogene	Gm43407	ENSMUST00000199816	processed_pseudogene		3	1	111108500	317
ENSMUSG00000029410	protein_coding	Ppef2	ENSMUST00000031359	protein_coding	principal1	5	-1	92253159	2274
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000147999	protein_coding		4	1	139352609	4061
ENSMUSG00000118186	processed_pseudogene	Gm8642	ENSMUST00000235656	processed_pseudogene		18	1	56518240	1141
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000148283	retained_intron		19	-1	4008018	412
ENSMUSG00000117019	lincRNA	Gm49896	ENSMUST00000233471	lincRNA		17	1	48556733	635
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000128787	protein_coding		19	-1	4012673	1436
ENSMUSG00000030871	protein_coding	Ears2	ENSMUST00000151530	retained_intron		7	-1	122067011	4900
ENSMUSG00000113837	lincRNA	Gm47902	ENSMUST00000221207	lincRNA		13	1	72769431	413
ENSMUSG00000106100	processed_pseudogene	Gm9314	ENSMUST00000199881	processed_pseudogene		3	-1	111322857	1528
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000132747	retained_intron		19	-1	4009847	932
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000039894	protein_coding	principal1	13	-1	14039638	1844
ENSMUSG00000110276	lincRNA	Gm45330	ENSMUST00000209681	lincRNA		17	-1	48738746	1575
ENSMUSG00000030871	protein_coding	Ears2	ENSMUST00000147397	retained_intron		7	-1	122067070	3222
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000134049	retained_intron		19	-1	4009140	692
ENSMUSG00000113082	lincRNA	D730050B12Rik	ENSMUST00000223149	lincRNA		13	-1	72816763	585
ENSMUSG00000053644	protein_coding	Aldh7a1	ENSMUST00000172902	processed_transcript		18	-1	56526849	588
ENSMUSG00000113952	processed_pseudogene	Rpl31-ps2	ENSMUST00000223231	processed_pseudogene		13	1	73233395	343
ENSMUSG00000105882	TEC	Gm42905	ENSMUST00000196237	TEC		3	1	111789492	1611
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000162326	nonsense_mediated_decay		13	-1	14039638	1853
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000150852	retained_intron		19	-1	4012704	909
ENSMUSG00000104711	processed_pseudogene	Gm43854	ENSMUST00000200418	processed_pseudogene		3	-1	111809829	394
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000133474	protein_coding		19	-1	4012708	759
ENSMUSG00000104543	lincRNA	Gm6602	ENSMUST00000198910	lincRNA		3	1	111881903	1927
ENSMUSG00000022596	protein_coding	Slurp1	ENSMUST00000190433	protein_coding	principal1	15	-1	74728034	2859
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000129706	nonsense_mediated_decay		19	-1	4012665	679
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000136921	protein_coding		19	-1	4012759	613
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000236203	protein_coding		19	-1	4012697	460
ENSMUSG00000022596	protein_coding	Slurp1	ENSMUST00000023261	protein_coding		15	-1	74728014	567
ENSMUSG00000022494	protein_coding	Shisa9	ENSMUST00000170672	protein_coding	principal4	16	1	11984581	3421
ENSMUSG00000032470	protein_coding	Mras	ENSMUST00000035045	protein_coding	principal1	9	-1	99437381	4701
ENSMUSG00000037916	protein_coding	Ndufv1	ENSMUST00000149482	retained_intron		19	-1	4012661	443
ENSMUSG00000043155	protein_coding	Hpdl	ENSMUST00000055436	protein_coding	principal1	4	-1	116821707	1804
ENSMUSG00000022494	protein_coding	Shisa9	ENSMUST00000023138	protein_coding	alternative2	16	1	11984581	4326
ENSMUSG00000032470	protein_coding	Mras	ENSMUST00000122384	protein_coding	principal1	9	-1	99436926	1167
ENSMUSG00000022742	protein_coding	Cpox	ENSMUST00000060077	protein_coding	principal1	16	1	58670292	3097
ENSMUSG00000056665	protein_coding	Them6	ENSMUST00000070923	protein_coding	principal1	15	1	74721204	1784
ENSMUSG00000022494	protein_coding	Shisa9	ENSMUST00000182154	processed_transcript		16	1	11984678	558
ENSMUSG00000032470	protein_coding	Mras	ENSMUST00000119472	protein_coding	principal1	9	-1	99425896	1190
ENSMUSG00000022494	protein_coding	Shisa9	ENSMUST00000229804	processed_transcript		16	1	11984720	538
ENSMUSG00000022742	protein_coding	Cpox	ENSMUST00000232176	retained_intron		16	1	58670328	2994
ENSMUSG00000081474	processed_pseudogene	Gm12855	ENSMUST00000119357	processed_pseudogene		4	-1	118791593	513
ENSMUSG00000022742	protein_coding	Cpox	ENSMUST00000231276	retained_intron		16	1	58674136	1362
ENSMUSG00000032470	protein_coding	Mras	ENSMUST00000147078	retained_intron		9	-1	99394695	407
ENSMUSG00000022742	protein_coding	Cpox	ENSMUST00000232532	processed_transcript		16	1	58677839	614
ENSMUSG00000032470	protein_coding	Mras	ENSMUST00000131047	retained_intron		9	-1	99401283	421
ENSMUSG00000025571	protein_coding	Tnrc6c	ENSMUST00000106344	protein_coding	principal1	11	1	117654813	8847
ENSMUSG00000040490	protein_coding	Lrfn2	ENSMUST00000046254	protein_coding	principal1	17	1	48932379	3202
ENSMUSG00000032470	protein_coding	Mras	ENSMUST00000123771	protein_coding		9	-1	99420152	482
ENSMUSG00000022742	protein_coding	Cpox	ENSMUST00000231492	retained_intron		16	1	58677856	470
ENSMUSG00000022742	protein_coding	Cpox	ENSMUST00000231342	processed_transcript		16	1	58715256	353
ENSMUSG00000066061	protein_coding	Olfr1335	ENSMUST00000084313	protein_coding	alternative2	4	-1	118809944	1148
ENSMUSG00000066061	protein_coding	Olfr1335	ENSMUST00000219094	protein_coding	principal2	4	-1	118809944	1148
ENSMUSG00000105507	processed_pseudogene	Gm43853	ENSMUST00000197162	processed_pseudogene		3	-1	112203015	301
ENSMUSG00000032113	protein_coding	Chek1	ENSMUST00000172702	protein_coding	principal1	9	-1	36726374	3797
ENSMUSG00000025571	protein_coding	Tnrc6c	ENSMUST00000138299	protein_coding		11	1	117721018	6612
ENSMUSG00000047293	protein_coding	Gpr15	ENSMUST00000089318	protein_coding	principal1	16	-1	58719070	1638
ENSMUSG00000105077	processed_pseudogene	Gm4859	ENSMUST00000199625	processed_pseudogene		3	1	112302372	787
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000159239	retained_intron		13	-1	14039621	1855
ENSMUSG00000046242	protein_coding	Nme9	ENSMUST00000163199	protein_coding	principal1	9	1	99451475	1196
ENSMUSG00000105073	processed_pseudogene	Gm9317	ENSMUST00000197055	processed_pseudogene		3	-1	112331772	862
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000159427	retained_intron		13	-1	14009844	614
ENSMUSG00000025571	protein_coding	Tnrc6c	ENSMUST00000140347	retained_intron		11	1	117742501	742
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000162241	retained_intron		13	-1	14009051	720
ENSMUSG00000030871	protein_coding	Ears2	ENSMUST00000033159	protein_coding	principal1	7	-1	122067263	2046
ENSMUSG00000046242	protein_coding	Nme9	ENSMUST00000056103	retained_intron		9	1	99470421	864
ENSMUSG00000025571	protein_coding	Tnrc6c	ENSMUST00000141287	retained_intron		11	1	117749231	1829
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000161554	retained_intron		13	-1	14009837	652
ENSMUSG00000019214	protein_coding	Chtf18	ENSMUST00000170070	protein_coding	alternative2	17	-1	25727410	3208
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000162440	processed_transcript		13	-1	14009503	389
ENSMUSG00000025571	protein_coding	Tnrc6c	ENSMUST00000026658	protein_coding	principal1	11	1	117654289	8724
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000159966	retained_intron		13	-1	14039612	823
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000160304	retained_intron		13	-1	14039596	933
ENSMUSG00000093984	unprocessed_pseudogene	Gm7365	ENSMUST00000120877	unprocessed_pseudogene		X	-1	27011645	639
ENSMUSG00000039233	protein_coding	Tbce	ENSMUST00000160776	retained_intron		13	-1	14039617	909
ENSMUSG00000096192	transcribed_processed_pseudogene	Gm18856	ENSMUST00000178096	transcribed_processed_pseudogene		13	-1	13965860	1374
ENSMUSG00000032113	protein_coding	Chek1	ENSMUST00000034625	protein_coding	principal1	9	-1	36726658	3397
ENSMUSG00000096192	transcribed_processed_pseudogene	Gm18856	ENSMUST00000222015	processed_transcript		13	-1	13971337	483
ENSMUSG00000019214	protein_coding	Chtf18	ENSMUST00000048054	protein_coding	principal2	17	-1	25727419	3214
ENSMUSG00000096192	transcribed_processed_pseudogene	Gm18856	ENSMUST00000221021	processed_transcript		13	-1	13971309	515
ENSMUSG00000024960	protein_coding	Plcb3	ENSMUST00000025912	protein_coding	principal1	19	-1	6969814	4257
ENSMUSG00000027602	protein_coding	Map1lc3a	ENSMUST00000029128	protein_coding	principal1	2	1	155276297	1112
ENSMUSG00000021604	protein_coding	Irx4	ENSMUST00000176684	protein_coding	principal1	13	1	73260479	2384
ENSMUSG00000019214	protein_coding	Chtf18	ENSMUST00000168914	retained_intron		17	-1	25727366	3812
ENSMUSG00000021604	protein_coding	Irx4	ENSMUST00000022095	protein_coding	principal1	13	1	73260497	2589
ENSMUSG00000029048	protein_coding	Rer1	ENSMUST00000149796	processed_transcript		4	-1	155086371	1803
ENSMUSG00000027602	protein_coding	Map1lc3a	ENSMUST00000145086	processed_transcript		2	1	155276543	807
ENSMUSG00000019214	protein_coding	Chtf18	ENSMUST00000167940	protein_coding		17	-1	25720901	442
ENSMUSG00000019214	protein_coding	Chtf18	ENSMUST00000169767	protein_coding		17	-1	25719785	430
ENSMUSG00000027602	protein_coding	Map1lc3a	ENSMUST00000154596	processed_transcript		2	1	155276889	826
ENSMUSG00000105785	processed_pseudogene	Gm42526	ENSMUST00000198956	processed_pseudogene		3	1	112591563	393
ENSMUSG00000019214	protein_coding	Chtf18	ENSMUST00000168060	retained_intron		17	-1	25720898	537
ENSMUSG00000026980	protein_coding	Ly75	ENSMUST00000112533	protein_coding	alternative2	2	-1	60383303	6901
ENSMUSG00000032113	protein_coding	Chek1	ENSMUST00000174105	processed_transcript		9	-1	36726585	2142
ENSMUSG00000019214	protein_coding	Chtf18	ENSMUST00000237158	retained_intron		17	-1	25727356	1613
ENSMUSG00000032113	protein_coding	Chek1	ENSMUST00000173963	protein_coding		9	-1	36725863	1509
ENSMUSG00000032113	protein_coding	Chek1	ENSMUST00000174794	retained_intron		9	-1	36722745	758
ENSMUSG00000032113	protein_coding	Chek1	ENSMUST00000173796	processed_transcript		9	-1	36727065	817
ENSMUSG00000032113	protein_coding	Chek1	ENSMUST00000173977	retained_intron		9	-1	36726570	508
ENSMUSG00000032113	protein_coding	Chek1	ENSMUST00000172742	protein_coding		9	-1	36726451	310
ENSMUSG00000026980	protein_coding	Ly75	ENSMUST00000028362	protein_coding	principal2	2	-1	60383231	5172
ENSMUSG00000024960	protein_coding	Plcb3	ENSMUST00000237726	retained_intron		19	-1	6969760	4558
ENSMUSG00000024960	protein_coding	Plcb3	ENSMUST00000236597	retained_intron		19	-1	6954847	604
ENSMUSG00000024960	protein_coding	Plcb3	ENSMUST00000235560	retained_intron		19	-1	6955597	921
ENSMUSG00000024960	protein_coding	Plcb3	ENSMUST00000235352	protein_coding		19	-1	6976470	1665
ENSMUSG00000024960	protein_coding	Plcb3	ENSMUST00000236961	processed_transcript		19	-1	6963923	660
ENSMUSG00000024960	protein_coding	Plcb3	ENSMUST00000235832	retained_intron		19	-1	6963491	1268
ENSMUSG00000029048	protein_coding	Rer1	ENSMUST00000030914	protein_coding	principal1	4	-1	155086373	1596
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000140278	nonsense_mediated_decay		13	-1	29855647	3372
ENSMUSG00000025739	protein_coding	Gng13	ENSMUST00000172002	protein_coding	principal1	17	1	25717171	719
ENSMUSG00000024960	protein_coding	Plcb3	ENSMUST00000237074	protein_coding		19	-1	6969708	636
ENSMUSG00000115423	protein_coding	AL731706.1	ENSMUST00000227806	protein_coding	principal1	2	-1	136891389	944
ENSMUSG00000024960	protein_coding	Plcb3	ENSMUST00000237446	processed_transcript		19	-1	6974351	887
ENSMUSG00000029048	protein_coding	Rer1	ENSMUST00000125357	processed_transcript		4	-1	155086382	373
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000022358	protein_coding	principal1	14	1	20707552	6073
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000006353	protein_coding	principal1	13	-1	29855674	2629
ENSMUSG00000025739	protein_coding	Gng13	ENSMUST00000115108	protein_coding	principal1	17	1	25717528	347
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000224751	protein_coding		14	1	20707653	5951
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000110323	protein_coding		13	-1	29474607	409
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000154209	protein_coding		13	-1	29517454	518
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000223840	protein_coding		14	1	20707849	5674
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000224165	retained_intron		14	1	20707871	636
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000224129	nonsense_mediated_decay		14	1	20710660	639
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000225332	retained_intron		14	1	20710660	2800
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000225715	retained_intron		14	1	20712099	598
ENSMUSG00000029752	protein_coding	Asns	ENSMUST00000115542	protein_coding	principal1	6	-1	7692871	2016
ENSMUSG00000056612	protein_coding	Ppp1r14b	ENSMUST00000070850	protein_coding	principal1	19	1	6974968	999
ENSMUSG00000029752	protein_coding	Asns	ENSMUST00000031766	protein_coding	principal1	6	-1	7693254	2001
ENSMUSG00000056612	protein_coding	Ppp1r14b	ENSMUST00000237084	protein_coding		19	1	6975241	686
ENSMUSG00000052488	protein_coding	Cherp	ENSMUST00000079510	protein_coding	alternative2	8	-1	72475119	3713
ENSMUSG00000056612	protein_coding	Ppp1r14b	ENSMUST00000236218	protein_coding		19	1	6975258	605
ENSMUSG00000056612	protein_coding	Ppp1r14b	ENSMUST00000237235	protein_coding		19	1	6975315	898
ENSMUSG00000029752	protein_coding	Asns	ENSMUST00000140097	processed_transcript		6	-1	7677385	448
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000131792	retained_intron		13	-1	29855643	2019
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000153086	retained_intron		13	-1	29855643	4383
ENSMUSG00000028370	protein_coding	Pappa	ENSMUST00000084501	protein_coding	principal1	4	1	65124174	11027
ENSMUSG00000029752	protein_coding	Asns	ENSMUST00000133972	retained_intron		6	-1	7682358	526
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000137225	nonsense_mediated_decay		13	-1	29855639	2519
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000123641	retained_intron		13	-1	29855657	907
ENSMUSG00000029752	protein_coding	Asns	ENSMUST00000126303	protein_coding		6	-1	7693110	908
ENSMUSG00000056612	protein_coding	Ppp1r14b	ENSMUST00000235195	retained_intron		19	1	6976449	552
ENSMUSG00000054146	protein_coding	Krt15	ENSMUST00000107411	protein_coding	principal1	11	-1	100135928	1700
ENSMUSG00000108098	processed_pseudogene	Gm18838	ENSMUST00000204855	processed_pseudogene		6	-1	61017736	886
ENSMUSG00000029752	protein_coding	Asns	ENSMUST00000139596	protein_coding		6	-1	7692222	568
ENSMUSG00000024118	protein_coding	Tedc2	ENSMUST00000024930	protein_coding	principal1	17	-1	24220790	2166
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000124532	protein_coding		13	-1	29855431	430
ENSMUSG00000108299	unprocessed_pseudogene	Gm43892	ENSMUST00000204373	unprocessed_pseudogene		6	-1	61044993	265
ENSMUSG00000029752	protein_coding	Asns	ENSMUST00000148349	protein_coding		6	-1	7692872	431
ENSMUSG00000054146	protein_coding	Krt15	ENSMUST00000148502	retained_intron		11	-1	100134398	689
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000091674	protein_coding		13	-1	29855663	2427
ENSMUSG00000052488	protein_coding	Cherp	ENSMUST00000212991	protein_coding	principal2	8	-1	72475226	3646
ENSMUSG00000006191	protein_coding	Cdkal1	ENSMUST00000129231	nonsense_mediated_decay		13	-1	29855665	694
ENSMUSG00000093858	sense_intronic	Gm19967	ENSMUST00000179676	sense_intronic		11	1	70864660	2138
ENSMUSG00000103431	lincRNA	Gm30686	ENSMUST00000195371	lincRNA		Y	1	14347558	621
ENSMUSG00000103431	lincRNA	Gm30686	ENSMUST00000195246	lincRNA		Y	1	14347558	436
ENSMUSG00000052488	protein_coding	Cherp	ENSMUST00000212548	processed_transcript		8	-1	72468331	284
ENSMUSG00000086423	sense_intronic	Gm11364	ENSMUST00000137593	sense_intronic		13	-1	29236620	297
ENSMUSG00000104191	protein_coding	Gm30737	ENSMUST00000192683	protein_coding	principal1	Y	1	14400710	923
ENSMUSG00000112076	processed_pseudogene	Gm9368	ENSMUST00000219348	processed_pseudogene		12	-1	33496897	831
ENSMUSG00000102492	TEC	Gm36987	ENSMUST00000194704	TEC		Y	-1	14528058	2979
ENSMUSG00000066647	transcribed_unprocessed_pseudogene	Gm5113	ENSMUST00000209028	processed_transcript		7	1	30169875	5117
ENSMUSG00000052488	protein_coding	Cherp	ENSMUST00000212016	retained_intron		8	-1	72475113	779
ENSMUSG00000104260	unprocessed_pseudogene	Gm31186	ENSMUST00000191786	unprocessed_pseudogene		Y	-1	14802420	696
ENSMUSG00000066647	transcribed_unprocessed_pseudogene	Gm5113	ENSMUST00000238596	transcribed_unprocessed_pseudogene		7	1	30173430	1163
ENSMUSG00000019987	protein_coding	Arg1	ENSMUST00000020161	protein_coding	principal1	10	-1	24927484	1477
ENSMUSG00000052488	protein_coding	Cherp	ENSMUST00000212070	processed_transcript		8	-1	72475135	382
ENSMUSG00000107394	lincRNA	1700012J15Rik	ENSMUST00000203458	lincRNA		6	1	7766394	471
ENSMUSG00000108087	lincRNA	Gm43893	ENSMUST00000203362	lincRNA		6	-1	61069255	437
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000223782	retained_intron		14	1	20715275	4288
ENSMUSG00000052488	protein_coding	Cherp	ENSMUST00000212870	processed_transcript		8	-1	72474836	351
ENSMUSG00000107844	processed_pseudogene	Gm8686	ENSMUST00000203028	processed_pseudogene		6	-1	7835659	388
ENSMUSG00000107652	lincRNA	Gm43894	ENSMUST00000203274	lincRNA		6	-1	61147907	688
ENSMUSG00000052488	protein_coding	Cherp	ENSMUST00000212586	retained_intron		8	-1	72475161	912
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000225743	retained_intron		14	1	20716059	428
ENSMUSG00000019987	protein_coding	Arg1	ENSMUST00000218260	retained_intron		10	-1	24916407	443
ENSMUSG00000013833	protein_coding	Med16	ENSMUST00000105378	protein_coding	alternative2	10	-1	79908921	3197
ENSMUSG00000019987	protein_coding	Arg1	ENSMUST00000220186	retained_intron		10	-1	24927437	702
ENSMUSG00000102251	lincRNA	Gm37654	ENSMUST00000193019	lincRNA		Y	1	14863840	1498
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000225010	retained_intron		14	1	20716545	3362
ENSMUSG00000112758	bidirectional_promoter_lncRNA	Gm36172	ENSMUST00000219852	bidirectional_promoter_lncRNA		10	1	24927619	723
ENSMUSG00000097080	lincRNA	1700086O06Rik	ENSMUST00000181757	lincRNA		18	-1	38250565	1173
ENSMUSG00000024118	protein_coding	Tedc2	ENSMUST00000137648	retained_intron		17	-1	24220851	2160
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000224485	retained_intron		14	1	20718601	641
ENSMUSG00000097080	lincRNA	1700086O06Rik	ENSMUST00000181871	lincRNA		18	-1	38250198	1229
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000223561	retained_intron		14	1	20718771	3122
ENSMUSG00000111970	lincRNA	Gm47715	ENSMUST00000219012	lincRNA		10	1	25000020	430
ENSMUSG00000102251	lincRNA	Gm37654	ENSMUST00000195071	lincRNA		Y	1	14864293	621
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000225187	retained_intron		14	1	20721171	1816
ENSMUSG00000102251	lincRNA	Gm37654	ENSMUST00000194456	lincRNA		Y	1	14864293	437
ENSMUSG00000111970	lincRNA	Gm47715	ENSMUST00000218700	lincRNA		10	1	25000020	678
ENSMUSG00000024118	protein_coding	Tedc2	ENSMUST00000124557	nonsense_mediated_decay		17	-1	24220615	1569
ENSMUSG00000021819	protein_coding	Zswim8	ENSMUST00000225911	protein_coding		14	1	20721611	1098
ENSMUSG00000013833	protein_coding	Med16	ENSMUST00000165684	protein_coding	principal3	10	-1	79908898	2950
ENSMUSG00000024118	protein_coding	Tedc2	ENSMUST00000138818	retained_intron		17	-1	24220731	836
ENSMUSG00000013833	protein_coding	Med16	ENSMUST00000170375	retained_intron		10	-1	79899685	903
ENSMUSG00000097080	lincRNA	1700086O06Rik	ENSMUST00000235608	lincRNA		18	-1	38250173	886
ENSMUSG00000024118	protein_coding	Tedc2	ENSMUST00000149916	retained_intron		17	-1	24220753	687
ENSMUSG00000097080	lincRNA	1700086O06Rik	ENSMUST00000235525	lincRNA		18	-1	38249878	461
ENSMUSG00000013833	protein_coding	Med16	ENSMUST00000163125	retained_intron		10	-1	79908818	2065
ENSMUSG00000081883	processed_pseudogene	Gm15574	ENSMUST00000119937	processed_pseudogene		3	-1	32880608	405
ENSMUSG00000097080	lincRNA	1700086O06Rik	ENSMUST00000236219	lincRNA		18	-1	38250203	834
ENSMUSG00000085185	antisense	BC028777	ENSMUST00000148704	antisense		17	1	24208861	826
ENSMUSG00000097080	lincRNA	1700086O06Rik	ENSMUST00000235818	lincRNA		18	-1	38250207	380
ENSMUSG00000066475	processed_pseudogene	Gm10268	ENSMUST00000085340	processed_pseudogene		18	1	38244828	555
ENSMUSG00000085185	antisense	BC028777	ENSMUST00000137883	antisense		17	1	24212570	912
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000019169	protein_coding	principal3	8	1	71367217	854
ENSMUSG00000013833	protein_coding	Med16	ENSMUST00000164705	protein_coding		10	-1	79908910	642
ENSMUSG00000085185	antisense	BC028777	ENSMUST00000171563	antisense		17	1	24208861	815
ENSMUSG00000013833	protein_coding	Med16	ENSMUST00000166964	protein_coding		10	-1	79908321	622
ENSMUSG00000013833	protein_coding	Med16	ENSMUST00000170409	protein_coding		10	-1	79908923	431
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000110054	protein_coding	principal3	8	1	71366942	973
ENSMUSG00000024442	protein_coding	Dele1	ENSMUST00000236994	retained_intron		18	1	38250255	3539
ENSMUSG00000103129	TEC	Gm37393	ENSMUST00000195118	TEC		1	-1	46881072	3870
ENSMUSG00000047649	protein_coding	Cd3eap	ENSMUST00000047036	protein_coding	principal1	7	-1	19359481	2239
ENSMUSG00000100213	lincRNA	Gm28151	ENSMUST00000189404	lincRNA		1	-1	46850479	951
ENSMUSG00000027281	protein_coding	Slx4ip	ENSMUST00000099311	protein_coding	principal1	2	1	136892168	5089
ENSMUSG00000008435	protein_coding	Rdh13	ENSMUST00000119485	nonsense_mediated_decay		7	-1	4445601	2119
ENSMUSG00000047649	protein_coding	Cd3eap	ENSMUST00000176333	retained_intron		7	-1	19359483	489
ENSMUSG00000052794	protein_coding	1700030K09Rik	ENSMUST00000064853	protein_coding	principal2	8	1	72443880	2887
ENSMUSG00000031691	protein_coding	Tnpo2	ENSMUST00000093360	protein_coding	principal2	8	1	85036915	4863
ENSMUSG00000006998	protein_coding	Psmd2	ENSMUST00000007212	protein_coding	principal1	16	1	20651652	2961
ENSMUSG00000027281	protein_coding	Slx4ip	ENSMUST00000141463	protein_coding		2	1	136891501	717
ENSMUSG00000052794	protein_coding	1700030K09Rik	ENSMUST00000121902	protein_coding	alternative2	8	1	72443932	2373
ENSMUSG00000052794	protein_coding	1700030K09Rik	ENSMUST00000139130	retained_intron		8	1	72457890	228
ENSMUSG00000037344	protein_coding	Slc12a9	ENSMUST00000039991	protein_coding	principal1	5	-1	137333597	3330
ENSMUSG00000008435	protein_coding	Rdh13	ENSMUST00000008579	protein_coding	principal1	7	-1	4445649	3034
ENSMUSG00000031371	protein_coding	Haus7	ENSMUST00000033737	protein_coding	principal4	X	-1	73459044	1380
ENSMUSG00000037344	protein_coding	Slc12a9	ENSMUST00000141517	retained_intron		5	-1	137322512	637
ENSMUSG00000008435	protein_coding	Rdh13	ENSMUST00000138798	protein_coding		7	-1	4445181	545
ENSMUSG00000031371	protein_coding	Haus7	ENSMUST00000077243	protein_coding	alternative2	X	-1	73459044	1032
ENSMUSG00000006998	protein_coding	Psmd2	ENSMUST00000232629	protein_coding		16	1	20651704	441
ENSMUSG00000037344	protein_coding	Slc12a9	ENSMUST00000149847	retained_intron		5	-1	137333597	1815
ENSMUSG00000037344	protein_coding	Slc12a9	ENSMUST00000156646	protein_coding		5	-1	137333010	365
ENSMUSG00000031691	protein_coding	Tnpo2	ENSMUST00000211601	protein_coding	alternative1	8	1	85037168	2941
ENSMUSG00000008435	protein_coding	Rdh13	ENSMUST00000147599	retained_intron		7	-1	4445593	3078
ENSMUSG00000090254	lincRNA	Gm1965	ENSMUST00000203378	lincRNA		6	1	89140994	2304
ENSMUSG00000027281	protein_coding	Slx4ip	ENSMUST00000135260	processed_transcript		2	1	136891608	4906
ENSMUSG00000031691	protein_coding	Tnpo2	ENSMUST00000210945	protein_coding		8	1	85037614	451
ENSMUSG00000031371	protein_coding	Haus7	ENSMUST00000131140	processed_transcript		X	-1	73447279	502
ENSMUSG00000008435	protein_coding	Rdh13	ENSMUST00000128299	processed_transcript		7	-1	4445642	594
ENSMUSG00000027281	protein_coding	Slx4ip	ENSMUST00000130856	processed_transcript		2	1	136892168	1572
ENSMUSG00000106666	processed_pseudogene	Gm43587	ENSMUST00000199590	processed_pseudogene		3	-1	112767012	204
ENSMUSG00000008435	protein_coding	Rdh13	ENSMUST00000154033	processed_transcript		7	-1	4445626	333
ENSMUSG00000102366	unprocessed_pseudogene	Gm37044	ENSMUST00000193531	unprocessed_pseudogene		Y	-1	14959595	693
ENSMUSG00000103527	TEC	Gm37261	ENSMUST00000194360	TEC		3	1	51672801	1101
ENSMUSG00000027281	protein_coding	Slx4ip	ENSMUST00000028737	protein_coding		2	1	136891218	2556
ENSMUSG00000032468	protein_coding	Armc8	ENSMUST00000035043	protein_coding	principal1	9	-1	99568899	4647
ENSMUSG00000027281	protein_coding	Slx4ip	ENSMUST00000180277	protein_coding	principal1	2	1	136905543	2723
ENSMUSG00000116563	protein_coding	AL731706.2	ENSMUST00000231720	protein_coding	principal1	2	-1	136885679	180
ENSMUSG00000074604	protein_coding	Mgst2	ENSMUST00000160753	processed_transcript		3	1	51660360	286
ENSMUSG00000031691	protein_coding	Tnpo2	ENSMUST00000210576	retained_intron		8	1	85037717	5669
ENSMUSG00000074604	protein_coding	Mgst2	ENSMUST00000161627	processed_transcript		3	1	51661178	370
ENSMUSG00000024393	protein_coding	Prrc2a	ENSMUST00000025253	protein_coding	principal1	17	-1	35164897	6888
ENSMUSG00000031691	protein_coding	Tnpo2	ENSMUST00000210117	processed_transcript		8	1	85040658	799
ENSMUSG00000101012	lincRNA	1700008K24Rik	ENSMUST00000185974	lincRNA		17	-1	49113515	833
ENSMUSG00000031691	protein_coding	Tnpo2	ENSMUST00000210461	retained_intron		8	1	85050208	356
ENSMUSG00000031691	protein_coding	Tnpo2	ENSMUST00000166592	protein_coding	principal2	8	1	85037168	4884
ENSMUSG00000101012	lincRNA	1700008K24Rik	ENSMUST00000190269	lincRNA		17	-1	49113528	682
ENSMUSG00000032468	protein_coding	Armc8	ENSMUST00000185524	protein_coding		9	-1	99568649	2820
ENSMUSG00000035493	protein_coding	Tgfbi	ENSMUST00000225600	nonsense_mediated_decay		13	1	56609523	3003
ENSMUSG00000024393	protein_coding	Prrc2a	ENSMUST00000174805	protein_coding		17	-1	35162969	6741
ENSMUSG00000035493	protein_coding	Tgfbi	ENSMUST00000223661	retained_intron		13	1	56609584	690
ENSMUSG00000032468	protein_coding	Armc8	ENSMUST00000186049	protein_coding		9	-1	99568667	2761
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000154550	retained_intron		8	1	71367217	1000
ENSMUSG00000042460	protein_coding	C1galt1	ENSMUST00000040159	protein_coding	principal1	6	1	7844842	6092
ENSMUSG00000032468	protein_coding	Armc8	ENSMUST00000191370	retained_intron		9	-1	99568663	340
ENSMUSG00000101012	lincRNA	1700008K24Rik	ENSMUST00000187177	lincRNA		17	-1	49113436	758
ENSMUSG00000107763	processed_pseudogene	Gm43962	ENSMUST00000203898	processed_pseudogene		6	-1	7863376	190
ENSMUSG00000087026	processed_transcript	A230103J11Rik	ENSMUST00000125244	processed_transcript		8	-1	85060460	1780
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000143657	retained_intron		8	1	71367217	930
ENSMUSG00000107549	TEC	Gm43961	ENSMUST00000203289	TEC		6	1	7853871	1872
ENSMUSG00000101012	lincRNA	1700008K24Rik	ENSMUST00000188649	lincRNA		17	-1	49113493	762
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000140236	retained_intron		8	1	71367780	895
ENSMUSG00000103909	unprocessed_pseudogene	Gm31511	ENSMUST00000193134	unprocessed_pseudogene		Y	1	15156683	657
ENSMUSG00000087026	processed_transcript	A230103J11Rik	ENSMUST00000156084	processed_transcript		8	-1	85060443	2086
ENSMUSG00000006998	protein_coding	Psmd2	ENSMUST00000172207	nonsense_mediated_decay		16	1	20651704	3001
ENSMUSG00000024393	protein_coding	Prrc2a	ENSMUST00000173558	retained_intron		17	-1	35150366	763
ENSMUSG00000006998	protein_coding	Psmd2	ENSMUST00000169195	processed_transcript		16	1	20651716	747
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000146221	retained_intron		8	1	71367243	691
ENSMUSG00000101012	lincRNA	1700008K24Rik	ENSMUST00000186479	lincRNA		17	-1	49113535	840
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000136368	retained_intron		8	1	71367243	934
ENSMUSG00000024393	protein_coding	Prrc2a	ENSMUST00000172899	retained_intron		17	-1	35150952	512
ENSMUSG00000105588	processed_pseudogene	Utp14b-ps1	ENSMUST00000197716	processed_pseudogene		3	1	113019875	2265
ENSMUSG00000006998	protein_coding	Psmd2	ENSMUST00000167869	retained_intron		16	1	20659007	600
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000142685	retained_intron		8	1	71367384	754
ENSMUSG00000025986	protein_coding	Slc39a10	ENSMUST00000027131	protein_coding	principal1	1	-1	46854046	5498
ENSMUSG00000024393	protein_coding	Prrc2a	ENSMUST00000174386	retained_intron		17	-1	35153259	692
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000137137	retained_intron		8	1	71368792	657
ENSMUSG00000006998	protein_coding	Psmd2	ENSMUST00000166071	retained_intron		16	1	20659352	601
ENSMUSG00000045952	processed_pseudogene	Gm5548	ENSMUST00000055878	processed_pseudogene		3	-1	113054285	397
ENSMUSG00000090254	lincRNA	Gm1965	ENSMUST00000162900	lincRNA		6	1	89141005	1712
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000139541	protein_coding		8	1	71367005	452
ENSMUSG00000024393	protein_coding	Prrc2a	ENSMUST00000172929	processed_transcript		17	-1	35164835	688
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000127517	retained_intron		8	1	71367641	464
ENSMUSG00000105665	processed_pseudogene	Gm38395	ENSMUST00000199904	processed_pseudogene		3	-1	113056625	830
ENSMUSG00000006998	protein_coding	Psmd2	ENSMUST00000232513	nonsense_mediated_decay		16	1	20659404	433
ENSMUSG00000006998	protein_coding	Psmd2	ENSMUST00000231897	protein_coding		16	1	20659404	659
ENSMUSG00000117115	processed_pseudogene	Gm9586	ENSMUST00000233339	processed_pseudogene		17	-1	49165758	1048
ENSMUSG00000025986	protein_coding	Slc39a10	ENSMUST00000141226	retained_intron		1	-1	46835899	2372
ENSMUSG00000006998	protein_coding	Psmd2	ENSMUST00000169184	retained_intron		16	1	20659419	939
ENSMUSG00000090254	lincRNA	Gm1965	ENSMUST00000161362	lincRNA		6	1	89141005	2405
ENSMUSG00000025986	protein_coding	Slc39a10	ENSMUST00000186852	protein_coding		1	-1	46892852	565
ENSMUSG00000074604	protein_coding	Mgst2	ENSMUST00000099106	protein_coding	principal1	3	1	51661179	603
ENSMUSG00000025986	protein_coding	Slc39a10	ENSMUST00000185520	protein_coding		1	-1	46888070	497
ENSMUSG00000048264	protein_coding	Dip2c	ENSMUST00000174552	protein_coding	principal1	13	1	9276528	8023
ENSMUSG00000002395	protein_coding	Use1	ENSMUST00000110053	protein_coding	alternative2	8	1	71366848	1064
ENSMUSG00000083079	unprocessed_pseudogene	Amy2b	ENSMUST00000120184	unprocessed_pseudogene		3	-1	113156727	1577
ENSMUSG00000074604	protein_coding	Mgst2	ENSMUST00000159554	protein_coding		3	1	51661214	486
ENSMUSG00000039529	protein_coding	Atp8b1	ENSMUST00000025482	protein_coding	principal1	18	-1	64661267	6719
ENSMUSG00000074604	protein_coding	Mgst2	ENSMUST00000161590	protein_coding		3	1	51661225	481
ENSMUSG00000090254	lincRNA	Gm1965	ENSMUST00000160361	lincRNA		6	1	89141005	2375
ENSMUSG00000048264	protein_coding	Dip2c	ENSMUST00000169960	protein_coding		13	1	9276913	4801
ENSMUSG00000039529	protein_coding	Atp8b1	ENSMUST00000235459	protein_coding		18	-1	64555200	737
ENSMUSG00000039529	protein_coding	Atp8b1	ENSMUST00000237686	nonsense_mediated_decay		18	-1	64660807	531
ENSMUSG00000048264	protein_coding	Dip2c	ENSMUST00000222280	protein_coding		13	1	9610806	2813
ENSMUSG00000087003	antisense	Cntrobos	ENSMUST00000132834	antisense		11	1	69294151	383
ENSMUSG00000053644	protein_coding	Aldh7a1	ENSMUST00000174518	protein_coding	alternative2	18	-1	56572951	4131
ENSMUSG00000035493	protein_coding	Tgfbi	ENSMUST00000045173	protein_coding	principal1	13	1	56609586	2714
ENSMUSG00000008167	protein_coding	Fbxw9	ENSMUST00000095220	protein_coding	principal1	8	1	85060055	1907
ENSMUSG00000053644	protein_coding	Aldh7a1	ENSMUST00000172734	protein_coding		18	-1	56562328	1880
ENSMUSG00000003549	protein_coding	Ercc1	ENSMUST00000003645	protein_coding	principal1	7	1	19344778	1375
ENSMUSG00000024442	protein_coding	Dele1	ENSMUST00000025314	protein_coding	principal1	18	1	38250259	2394
ENSMUSG00000048264	protein_coding	Dip2c	ENSMUST00000166299	protein_coding		13	1	9276982	4822
ENSMUSG00000117808	TEC	Gm50338	ENSMUST00000235291	TEC		18	-1	64601643	1573
ENSMUSG00000112948	TEC	Gm48871	ENSMUST00000223468	TEC		13	1	9445900	2520
ENSMUSG00000035493	protein_coding	Tgfbi	ENSMUST00000225300	processed_transcript		13	1	56626102	782
ENSMUSG00000113355	TEC	Gm48888	ENSMUST00000223052	TEC		13	-1	9637089	1761
ENSMUSG00000118133	transcribed_processed_pseudogene	Gm6978	ENSMUST00000236712	transcribed_processed_pseudogene		18	-1	64612440	716
ENSMUSG00000035493	protein_coding	Tgfbi	ENSMUST00000226024	retained_intron		13	1	56631213	657
ENSMUSG00000024442	protein_coding	Dele1	ENSMUST00000236927	retained_intron		18	1	38250267	4482
ENSMUSG00000099712	unprocessed_pseudogene	Gm29411	ENSMUST00000189889	unprocessed_pseudogene		Y	1	37364052	696
ENSMUSG00000053644	protein_coding	Aldh7a1	ENSMUST00000066208	protein_coding	principal3	18	-1	56562309	1914
ENSMUSG00000024442	protein_coding	Dele1	ENSMUST00000236078	protein_coding		18	1	38250275	1837
ENSMUSG00000118133	transcribed_processed_pseudogene	Gm6978	ENSMUST00000238142	processed_transcript		18	-1	64613099	596
ENSMUSG00000047636	protein_coding	Cdcp2	ENSMUST00000062495	protein_coding	principal2	4	1	107096891	2611
ENSMUSG00000024442	protein_coding	Dele1	ENSMUST00000235762	retained_intron		18	1	38250277	780
ENSMUSG00000079550	protein_coding	Mpp4	ENSMUST00000191200	protein_coding	alternative2	1	-1	59158668	2215
ENSMUSG00000047636	protein_coding	Cdcp2	ENSMUST00000221740	protein_coding	alternative2	4	1	107097708	1623
ENSMUSG00000074604	protein_coding	Mgst2	ENSMUST00000159400	processed_transcript		3	1	51671463	629
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000163804	nonsense_mediated_decay		7	1	4460674	710
ENSMUSG00000096846	protein_coding	Gm8890	ENSMUST00000164262	protein_coding	principal5	5	1	11256033	730
ENSMUSG00000053644	protein_coding	Aldh7a1	ENSMUST00000174704	nonsense_mediated_decay		18	-1	56562218	1789
ENSMUSG00000074604	protein_coding	Mgst2	ENSMUST00000162125	processed_transcript		3	1	51671915	351
ENSMUSG00000096846	protein_coding	Gm8890	ENSMUST00000177727	protein_coding	alternative2	5	1	11257157	465
ENSMUSG00000024442	protein_coding	Dele1	ENSMUST00000235904	nonsense_mediated_decay		18	1	38250288	2823
ENSMUSG00000020707	protein_coding	Rnf135	ENSMUST00000017839	protein_coding	principal1	11	1	80183851	1984
ENSMUSG00000053644	protein_coding	Aldh7a1	ENSMUST00000168517	retained_intron		18	-1	56537617	555
ENSMUSG00000109012	processed_pseudogene	Gm44820	ENSMUST00000207420	processed_pseudogene		7	1	5807013	396
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000167298	protein_coding		7	1	4460702	355
ENSMUSG00000080869	processed_pseudogene	Gm11856	ENSMUST00000118712	processed_pseudogene		4	1	15486366	276
ENSMUSG00000074604	protein_coding	Mgst2	ENSMUST00000161230	retained_intron		3	1	51675136	2803
ENSMUSG00000053644	protein_coding	Aldh7a1	ENSMUST00000170309	protein_coding		18	-1	56562226	483
ENSMUSG00000024442	protein_coding	Dele1	ENSMUST00000236841	retained_intron		18	1	38258252	704
ENSMUSG00000020707	protein_coding	Rnf135	ENSMUST00000134909	processed_transcript		11	1	80184223	333
ENSMUSG00000074604	protein_coding	Mgst2	ENSMUST00000195423	retained_intron		3	1	51681622	481
ENSMUSG00000099586	unprocessed_pseudogene	Gm28222	ENSMUST00000191210	unprocessed_pseudogene		Y	1	37400946	615
ENSMUSG00000053644	protein_coding	Aldh7a1	ENSMUST00000171851	retained_intron		18	-1	56559422	568
ENSMUSG00000118388	protein_coding	Vmn1r64	ENSMUST00000078475	protein_coding	principal1	7	-1	5884542	963
ENSMUSG00000053644	protein_coding	Aldh7a1	ENSMUST00000171844	protein_coding		18	-1	56562197	365
ENSMUSG00000003549	protein_coding	Ercc1	ENSMUST00000160192	retained_intron		7	1	19345101	1179
ENSMUSG00000079550	protein_coding	Mpp4	ENSMUST00000078874	protein_coding	alternative2	1	-1	59161636	2345
ENSMUSG00000003549	protein_coding	Ercc1	ENSMUST00000160909	retained_intron		7	1	19345107	797
ENSMUSG00000092393	processed_pseudogene	Gm20399	ENSMUST00000174652	processed_pseudogene		7	1	5905019	132
ENSMUSG00000107334	lincRNA	Gm7538	ENSMUST00000200918	lincRNA		5	-1	119200018	1348
ENSMUSG00000085666	processed_pseudogene	Tdg-ps2	ENSMUST00000121229	processed_pseudogene		10	-1	42055306	1194
ENSMUSG00000056728	protein_coding	Ctsll3	ENSMUST00000043754	protein_coding	principal1	13	-1	60802849	1337
ENSMUSG00000105564	processed_pseudogene	Gm8891	ENSMUST00000198546	processed_pseudogene		5	1	11265590	832
ENSMUSG00000003549	protein_coding	Ercc1	ENSMUST00000160369	protein_coding		7	1	19345149	1175
ENSMUSG00000100066	unprocessed_pseudogene	Gm21835	ENSMUST00000190671	unprocessed_pseudogene		Y	1	37430480	696
ENSMUSG00000056728	protein_coding	Ctsll3	ENSMUST00000223578	retained_intron		13	-1	60799850	724
ENSMUSG00000079550	protein_coding	Mpp4	ENSMUST00000114275	protein_coding	principal4	1	-1	59163389	2982
ENSMUSG00000092580	processed_pseudogene	Vmn1r-ps45	ENSMUST00000174106	processed_pseudogene		7	-1	5930455	955
ENSMUSG00000003549	protein_coding	Ercc1	ENSMUST00000161378	nonsense_mediated_decay		7	1	19345160	467
ENSMUSG00000083330	processed_pseudogene	Gm11859	ENSMUST00000118099	processed_pseudogene		4	-1	15532111	455
ENSMUSG00000003549	protein_coding	Ercc1	ENSMUST00000176818	protein_coding		7	1	19348524	370
ENSMUSG00000106148	lincRNA	Gm32877	ENSMUST00000197419	lincRNA		5	-1	11340297	709
ENSMUSG00000003549	protein_coding	Ercc1	ENSMUST00000162992	processed_transcript		7	1	19349476	584
ENSMUSG00000107757	processed_pseudogene	Gm43898	ENSMUST00000204456	processed_pseudogene		6	1	61400607	424
ENSMUSG00000008496	protein_coding	Pou2f2	ENSMUST00000175774	protein_coding	alternative2	7	-1	25132488	7047
ENSMUSG00000039552	protein_coding	Rsph4a	ENSMUST00000169670	protein_coding	principal1	10	1	33905111	3650
ENSMUSG00000092271	processed_pseudogene	Vmn1r-ps46	ENSMUST00000173862	processed_pseudogene		7	-1	5967216	949
ENSMUSG00000003549	protein_coding	Ercc1	ENSMUST00000162197	retained_intron		7	1	19352173	712
ENSMUSG00000056900	protein_coding	Usp13	ENSMUST00000072312	protein_coding	principal2	3	1	32817546	7580
ENSMUSG00000082673	processed_pseudogene	Gm11857	ENSMUST00000119817	processed_pseudogene		4	1	15636169	324
ENSMUSG00000027274	protein_coding	Mkks	ENSMUST00000028730	protein_coding	principal1	2	-1	136891382	2935
ENSMUSG00000114064	processed_pseudogene	Gm9370	ENSMUST00000222787	processed_pseudogene		12	1	33846454	609
ENSMUSG00000056900	protein_coding	Usp13	ENSMUST00000108228	protein_coding	alternative2	3	1	32817571	2767
ENSMUSG00000101879	lincRNA	Gm28820	ENSMUST00000188530	lincRNA		Y	-1	37550565	1498
ENSMUSG00000020911	protein_coding	Krt19	ENSMUST00000007317	protein_coding	principal1	11	-1	100146120	1576
ENSMUSG00000046518	protein_coding	Ferd3l	ENSMUST00000061035	protein_coding	principal1	12	1	33928425	886
ENSMUSG00000056900	protein_coding	Usp13	ENSMUST00000172481	nonsense_mediated_decay		3	1	32817711	1744
ENSMUSG00000038526	protein_coding	Car14	ENSMUST00000036181	protein_coding	principal1	3	-1	95904691	1709
ENSMUSG00000003549	protein_coding	Ercc1	ENSMUST00000177486	nonsense_mediated_decay		7	1	19352633	413
ENSMUSG00000101879	lincRNA	Gm28820	ENSMUST00000190197	lincRNA		Y	-1	37550112	437
ENSMUSG00000056900	protein_coding	Usp13	ENSMUST00000156769	protein_coding		3	1	32915003	627
ENSMUSG00000084181	processed_pseudogene	Gm11858	ENSMUST00000117935	processed_pseudogene		4	-1	15741767	838
ENSMUSG00000114082	bidirectional_promoter_lncRNA	Gm40383	ENSMUST00000222601	bidirectional_promoter_lncRNA		12	-1	33928456	610
ENSMUSG00000081260	processed_pseudogene	Gm13149	ENSMUST00000122071	processed_pseudogene		4	-1	146948498	339
ENSMUSG00000027274	protein_coding	Mkks	ENSMUST00000110089	protein_coding	principal1	2	-1	136891389	3178
ENSMUSG00000003549	protein_coding	Ercc1	ENSMUST00000176723	retained_intron		7	1	19354371	421
ENSMUSG00000038526	protein_coding	Car14	ENSMUST00000147962	protein_coding		3	-1	95904685	895
ENSMUSG00000008496	protein_coding	Pou2f2	ENSMUST00000108415	protein_coding	principal3	7	-1	25132488	7095
ENSMUSG00000020911	protein_coding	Krt19	ENSMUST00000126460	processed_transcript		11	-1	100143699	823
ENSMUSG00000066850	protein_coding	Vmn1r65	ENSMUST00000227656	retained_intron		7	-1	6011010	3147
ENSMUSG00000027274	protein_coding	Mkks	ENSMUST00000144275	processed_transcript		2	-1	136891154	810
ENSMUSG00000035799	protein_coding	Twist1	ENSMUST00000049089	protein_coding	principal1	12	1	33957671	1628
ENSMUSG00000020911	protein_coding	Krt19	ENSMUST00000125888	processed_transcript		11	-1	100148665	546
ENSMUSG00000038526	protein_coding	Car14	ENSMUST00000149202	retained_intron		3	-1	95904684	984
ENSMUSG00000038526	protein_coding	Car14	ENSMUST00000126722	retained_intron		3	-1	95903748	452
ENSMUSG00000079550	protein_coding	Mpp4	ENSMUST00000187825	processed_transcript		1	-1	59145802	2590
ENSMUSG00000066850	protein_coding	Vmn1r65	ENSMUST00000086338	protein_coding	principal1	7	-1	6011010	2682
ENSMUSG00000079550	protein_coding	Mpp4	ENSMUST00000186477	protein_coding	alternative2	1	-1	59158661	1885
ENSMUSG00000061576	protein_coding	Dpp6	ENSMUST00000071500	protein_coding	principal3	5	1	26817357	3826
ENSMUSG00000113886	sense_intronic	Gm48905	ENSMUST00000222829	sense_intronic		12	1	28810138	380
ENSMUSG00000008496	protein_coding	Pou2f2	ENSMUST00000098679	protein_coding		7	-1	25132488	2340
ENSMUSG00000061576	protein_coding	Dpp6	ENSMUST00000136574	retained_intron		5	1	26817434	2506
ENSMUSG00000103884	TEC	Gm37005	ENSMUST00000193281	TEC		1	-1	8644859	1164
ENSMUSG00000103819	processed_pseudogene	Gm38008	ENSMUST00000195333	processed_pseudogene		1	-1	9259134	518
ENSMUSG00000095829	protein_coding	Speer1	ENSMUST00000172106	protein_coding	principal1	5	1	11341516	1123
ENSMUSG00000095829	protein_coding	Speer1	ENSMUST00000179482	protein_coding		5	1	11342679	465
ENSMUSG00000061576	protein_coding	Dpp6	ENSMUST00000120555	protein_coding	alternative2	5	1	26904695	4703
ENSMUSG00000104504	processed_pseudogene	Gm7445	ENSMUST00000192115	processed_pseudogene		1	1	8856763	340
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000099747	protein_coding	principal1	13	1	13954469	3892
ENSMUSG00000118325	TEC	Gm50324	ENSMUST00000237300	TEC		19	-1	9898707	1208
ENSMUSG00000102316	TEC	Gm37629	ENSMUST00000193635	TEC		1	-1	9192116	1050
ENSMUSG00000087066	antisense	Gm15518	ENSMUST00000127115	antisense		16	-1	49798870	2108
ENSMUSG00000102647	TEC	Gm38024	ENSMUST00000192338	TEC		1	-1	8453491	2532
ENSMUSG00000040732	protein_coding	Erg	ENSMUST00000233881	protein_coding	principal3	16	-1	95530365	3249
ENSMUSG00000084353	processed_pseudogene	Gm15452	ENSMUST00000119877	processed_pseudogene		1	-1	8792162	240
ENSMUSG00000008167	protein_coding	Fbxw9	ENSMUST00000139721	retained_intron		8	1	85060056	1993
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000126214	protein_coding	principal1	6	1	61180324	5657
ENSMUSG00000008167	protein_coding	Fbxw9	ENSMUST00000145479	retained_intron		8	1	85060097	1138
ENSMUSG00000042041	protein_coding	2010003K11Rik	ENSMUST00000048482	protein_coding	principal1	19	-1	4498583	1167
ENSMUSG00000040732	protein_coding	Erg	ENSMUST00000233664	protein_coding		16	-1	95459303	3062
ENSMUSG00000061576	protein_coding	Dpp6	ENSMUST00000122171	protein_coding		5	1	27049199	4720
ENSMUSG00000008167	protein_coding	Fbxw9	ENSMUST00000152884	retained_intron		8	1	85060529	2327
ENSMUSG00000008496	protein_coding	Pou2f2	ENSMUST00000108418	protein_coding		7	-1	25132477	1934
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000223307	retained_intron		13	1	13954621	2400
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000133478	retained_intron		6	1	61180537	2229
ENSMUSG00000061576	protein_coding	Dpp6	ENSMUST00000200274	retained_intron		5	1	27049393	2738
ENSMUSG00000008167	protein_coding	Fbxw9	ENSMUST00000142036	processed_transcript		8	1	85060567	1969
ENSMUSG00000040732	protein_coding	Erg	ENSMUST00000113848	protein_coding		16	-1	95530365	2139
ENSMUSG00000081026	processed_pseudogene	Gm11855	ENSMUST00000121562	processed_pseudogene		4	-1	15821370	1869
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000131989	retained_intron		6	1	61180538	1911
ENSMUSG00000040732	protein_coding	Erg	ENSMUST00000233269	protein_coding		16	-1	95586593	2232
ENSMUSG00000008167	protein_coding	Fbxw9	ENSMUST00000125109	retained_intron		8	1	85064595	497
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000221974	protein_coding	principal1	13	1	13954625	2439
ENSMUSG00000064231	processed_pseudogene	Gm5321	ENSMUST00000072050	processed_pseudogene		7	1	6019022	447
ENSMUSG00000008167	protein_coding	Fbxw9	ENSMUST00000143763	processed_transcript		8	1	85065568	404
ENSMUSG00000099412	processed_pseudogene	Gm28223	ENSMUST00000190469	processed_pseudogene		Y	1	37584337	315
ENSMUSG00000040732	protein_coding	Erg	ENSMUST00000122199	protein_coding	alternative1	16	-1	95459348	2007
ENSMUSG00000008167	protein_coding	Fbxw9	ENSMUST00000151962	retained_intron		8	1	85065622	657
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000222110	nonsense_mediated_decay		13	1	13954654	795
ENSMUSG00000008167	protein_coding	Fbxw9	ENSMUST00000141183	retained_intron		8	1	85066063	757
ENSMUSG00000040732	protein_coding	Erg	ENSMUST00000171646	protein_coding		16	-1	95524603	1519
ENSMUSG00000008496	protein_coding	Pou2f2	ENSMUST00000108417	protein_coding	alternative2	7	-1	25132488	1937
ENSMUSG00000036613	protein_coding	Eipr1	ENSMUST00000221877	protein_coding	principal1	12	1	28751803	4091
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000221764	processed_transcript		13	1	13954674	435
ENSMUSG00000061576	protein_coding	Dpp6	ENSMUST00000148039	nonsense_mediated_decay		5	1	27261975	664
ENSMUSG00000106351	processed_pseudogene	Gm8896	ENSMUST00000197434	processed_pseudogene		5	1	11351109	1106
ENSMUSG00000100920	unprocessed_pseudogene	Gm18348	ENSMUST00000191227	unprocessed_pseudogene		7	-1	47763675	820
ENSMUSG00000008496	protein_coding	Pou2f2	ENSMUST00000108416	protein_coding		7	-1	25132488	1754
ENSMUSG00000079550	protein_coding	Mpp4	ENSMUST00000188494	retained_intron		1	-1	59161567	3531
ENSMUSG00000040732	protein_coding	Erg	ENSMUST00000176345	protein_coding		16	-1	95459245	1222
ENSMUSG00000036613	protein_coding	Eipr1	ENSMUST00000222407	protein_coding		12	1	28751839	489
ENSMUSG00000061576	protein_coding	Dpp6	ENSMUST00000101471	protein_coding	alternative1	5	1	27261975	4491
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000147576	retained_intron		6	1	61313801	587
ENSMUSG00000079550	protein_coding	Mpp4	ENSMUST00000189884	retained_intron		1	-1	59152347	3240
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000110522	protein_coding		12	-1	70347350	4405
ENSMUSG00000008496	protein_coding	Pou2f2	ENSMUST00000108413	protein_coding		7	-1	25132488	1599
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000223483	nonsense_mediated_decay		13	1	13954674	1876
ENSMUSG00000109197	lincRNA	4933402C05Rik	ENSMUST00000208189	lincRNA		7	1	6039131	1035
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000204337	processed_transcript		6	1	61319650	538
ENSMUSG00000040732	protein_coding	Erg	ENSMUST00000121809	protein_coding		16	-1	95459245	1368
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000221300	protein_coding	principal1	13	1	13954674	2397
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000067307	protein_coding		6	1	61373997	1519
ENSMUSG00000079550	protein_coding	Mpp4	ENSMUST00000189743	retained_intron		1	-1	59150634	1439
ENSMUSG00000109283	lincRNA	Gm44733	ENSMUST00000209063	lincRNA		7	-1	6042950	582
ENSMUSG00000008496	protein_coding	Pou2f2	ENSMUST00000176408	protein_coding		7	-1	25132512	1697
ENSMUSG00000109283	lincRNA	Gm44733	ENSMUST00000208067	lincRNA		7	-1	6042950	543
ENSMUSG00000079550	protein_coding	Mpp4	ENSMUST00000186790	retained_intron		1	-1	59161572	1514
ENSMUSG00000036613	protein_coding	Eipr1	ENSMUST00000035657	nonsense_mediated_decay		12	1	28751855	1747
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000223389	processed_transcript		13	1	13964646	434
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000221333	protein_coding		13	1	13966344	602
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000145554	retained_intron		6	1	61374005	695
ENSMUSG00000008496	protein_coding	Pou2f2	ENSMUST00000147146	protein_coding		7	-1	25120858	609
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000203112	processed_transcript		6	1	61374040	685
ENSMUSG00000106034	lincRNA	1700108N06Rik	ENSMUST00000196572	lincRNA		5	-1	11415204	681
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000220681	protein_coding		13	1	13987353	767
ENSMUSG00000036613	protein_coding	Eipr1	ENSMUST00000221555	protein_coding		12	1	28751861	620
ENSMUSG00000079550	protein_coding	Mpp4	ENSMUST00000066374	protein_coding	alternative2	1	-1	59161636	2344
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000134710	protein_coding		6	1	61570670	1520
ENSMUSG00000036613	protein_coding	Eipr1	ENSMUST00000221574	processed_transcript		12	1	28857312	753
ENSMUSG00000008496	protein_coding	Pou2f2	ENSMUST00000175754	retained_intron		7	-1	25179726	455
ENSMUSG00000101831	unprocessed_pseudogene	Gm29412	ENSMUST00000185869	unprocessed_pseudogene		Y	1	37620892	696
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000220932	retained_intron		13	1	13994420	751
ENSMUSG00000036613	protein_coding	Eipr1	ENSMUST00000220878	retained_intron		12	1	28862849	927
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000203850	processed_transcript		6	1	61785111	790
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000110520	protein_coding		12	-1	70347332	4156
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000232648	protein_coding		6	1	61956689	3172
ENSMUSG00000015750	protein_coding	Aph1a	ENSMUST00000015894	protein_coding	principal3	3	1	95893969	2863
ENSMUSG00000100428	unprocessed_pseudogene	Gm29413	ENSMUST00000186019	unprocessed_pseudogene		Y	-1	37706635	880
ENSMUSG00000097573	antisense	G730003C15Rik	ENSMUST00000189096	antisense		1	1	59119833	2309
ENSMUSG00000039578	protein_coding	Ccser1	ENSMUST00000045522	protein_coding	principal1	6	1	61310855	2688
ENSMUSG00000039242	protein_coding	B3galnt2	ENSMUST00000222420	protein_coding		13	1	13995154	693
ENSMUSG00000097573	antisense	G730003C15Rik	ENSMUST00000180570	antisense		1	1	59119833	2307
ENSMUSG00000036613	protein_coding	Eipr1	ENSMUST00000220933	processed_transcript		12	1	28863334	382
ENSMUSG00000114081	TEC	Gm48904	ENSMUST00000220880	TEC		12	1	28789669	2944
ENSMUSG00000101757	unprocessed_pseudogene	Gm28273	ENSMUST00000185811	unprocessed_pseudogene		Y	-1	73937499	695
ENSMUSG00000097924	bidirectional_promoter_lncRNA	A730020E08Rik	ENSMUST00000204848	bidirectional_promoter_lncRNA		6	-1	61174525	639
ENSMUSG00000015750	protein_coding	Aph1a	ENSMUST00000197081	protein_coding		3	1	95894033	286
ENSMUSG00000061576	protein_coding	Dpp6	ENSMUST00000134175	retained_intron		5	1	27533777	1316
ENSMUSG00000112296	processed_pseudogene	Gm47768	ENSMUST00000219028	processed_pseudogene		10	1	17514730	215
ENSMUSG00000097924	bidirectional_promoter_lncRNA	A730020E08Rik	ENSMUST00000180421	bidirectional_promoter_lncRNA		6	-1	61180270	3387
ENSMUSG00000106537	TEC	Gm43502	ENSMUST00000200263	TEC		5	1	27218185	2596
ENSMUSG00000112587	lincRNA	Gm47769	ENSMUST00000219355	lincRNA		10	-1	17520608	332
ENSMUSG00000096732	protein_coding	Gm8897	ENSMUST00000167041	protein_coding	principal5	5	1	11416418	1099
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000223160	protein_coding	principal1	12	-1	70347326	3574
ENSMUSG00000096732	protein_coding	Gm8897	ENSMUST00000179679	protein_coding	alternative2	5	1	11417626	465
ENSMUSG00000097924	bidirectional_promoter_lncRNA	A730020E08Rik	ENSMUST00000181288	bidirectional_promoter_lncRNA		6	-1	61180810	1244
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000222316	protein_coding		12	-1	70347327	3049
ENSMUSG00000107908	processed_pseudogene	Gm43895	ENSMUST00000203219	processed_pseudogene		6	-1	62309262	855
ENSMUSG00000108246	TEC	Gm43896	ENSMUST00000203440	TEC		6	1	61975098	2032
ENSMUSG00000099601	lincRNA	Gm29671	ENSMUST00000189438	lincRNA		Y	1	37808837	2166
ENSMUSG00000107590	processed_pseudogene	Gm43897	ENSMUST00000204019	processed_pseudogene		6	-1	62294010	309
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000221294	protein_coding		12	-1	70347089	2752
ENSMUSG00000086505	antisense	Gm16058	ENSMUST00000124392	antisense		5	-1	27553875	427
ENSMUSG00000104601	processed_pseudogene	Gm29745	ENSMUST00000198005	processed_pseudogene		5	1	11426453	687
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000223518	retained_intron		12	-1	70257127	4807
ENSMUSG00000112987	unprocessed_pseudogene	Gm5954	ENSMUST00000222563	unprocessed_pseudogene		12	-1	24016997	495
ENSMUSG00000015750	protein_coding	Aph1a	ENSMUST00000056710	protein_coding	alternative1	3	1	95894055	1601
ENSMUSG00000105549	processed_pseudogene	Gm43540	ENSMUST00000196320	processed_pseudogene		5	1	11460424	3848
ENSMUSG00000025580	protein_coding	Eif4a3	ENSMUST00000026667	protein_coding	principal1	11	-1	119300089	1509
ENSMUSG00000055730	protein_coding	Ces2a	ENSMUST00000034346	protein_coding	principal3	8	1	104734003	1960
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000127052	protein_coding		1	1	172481788	617
ENSMUSG00000046932	protein_coding	Vmn1r193	ENSMUST00000228303	protein_coding	principal1	13	-1	22223160	6653
ENSMUSG00000025580	protein_coding	Eif4a3	ENSMUST00000134743	processed_transcript		11	-1	119300018	377
ENSMUSG00000046932	protein_coding	Vmn1r193	ENSMUST00000227457	protein_coding	principal1	13	-1	22223160	6429
ENSMUSG00000015750	protein_coding	Aph1a	ENSMUST00000197232	retained_intron		3	1	95894465	2679
ENSMUSG00000025580	protein_coding	Eif4a3	ENSMUST00000106253	protein_coding		11	-1	119300014	916
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000167755	protein_coding		12	-1	70347330	4559
ENSMUSG00000055730	protein_coding	Ces2a	ENSMUST00000161824	nonsense_mediated_decay		8	1	104734028	655
ENSMUSG00000025580	protein_coding	Eif4a3	ENSMUST00000135294	processed_transcript		11	-1	119293596	473
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000221041	protein_coding		12	-1	70347350	3767
ENSMUSG00000046932	protein_coding	Vmn1r193	ENSMUST00000227562	protein_coding	principal1	13	-1	22223160	6840
ENSMUSG00000055730	protein_coding	Ces2a	ENSMUST00000159303	protein_coding		8	1	104739608	798
ENSMUSG00000046932	protein_coding	Vmn1r193	ENSMUST00000057516	protein_coding	principal1	13	-1	22219820	960
ENSMUSG00000006007	protein_coding	Pdc	ENSMUST00000191228	protein_coding	principal1	1	1	150319417	1235
ENSMUSG00000095423	unprocessed_pseudogene	Gm7375	ENSMUST00000179232	unprocessed_pseudogene		X	1	27334822	639
ENSMUSG00000058499	protein_coding	Pip	ENSMUST00000075351	protein_coding	principal1	6	1	41847535	588
ENSMUSG00000006007	protein_coding	Pdc	ENSMUST00000186572	protein_coding		1	1	150319426	654
ENSMUSG00000025580	protein_coding	Eif4a3	ENSMUST00000129044	processed_transcript		11	-1	119289010	466
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000222603	protein_coding		12	-1	70347350	3700
ENSMUSG00000055730	protein_coding	Ces2a	ENSMUST00000164182	protein_coding	alternative2	8	1	104734018	1850
ENSMUSG00000025580	protein_coding	Eif4a3	ENSMUST00000138849	processed_transcript		11	-1	119289076	613
ENSMUSG00000006007	protein_coding	Pdc	ENSMUST00000185698	protein_coding		1	1	150319429	3335
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000221370	protein_coding		12	-1	70347614	2393
ENSMUSG00000058499	protein_coding	Pip	ENSMUST00000203244	protein_coding		6	1	41847568	736
ENSMUSG00000073158	protein_coding	9030624G23Rik	ENSMUST00000101538	protein_coding	principal1	12	-1	24097246	2245
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000221306	processed_transcript		12	-1	70268048	399
ENSMUSG00000058499	protein_coding	Pip	ENSMUST00000204575	protein_coding		6	1	41847585	1857
ENSMUSG00000021071	protein_coding	Trim9	ENSMUST00000220557	processed_transcript		12	-1	70316255	642
ENSMUSG00000006007	protein_coding	Pdc	ENSMUST00000165062	protein_coding	principal1	1	1	150319417	1246
ENSMUSG00000069297	protein_coding	Vmn1r194	ENSMUST00000091737	protein_coding	principal1	13	1	22244215	891
ENSMUSG00000099447	antisense	2310030A07Rik	ENSMUST00000186460	antisense		1	-1	150346771	610
ENSMUSG00000074218	protein_coding	Cox7a1	ENSMUST00000098594	protein_coding	principal1	7	1	30184144	393
ENSMUSG00000102990	TEC	Gm37764	ENSMUST00000194664	TEC		1	1	150324538	2150
ENSMUSG00000101792	processed_transcript	Gm28447	ENSMUST00000186677	antisense		10	-1	61611074	2230
ENSMUSG00000113632	unprocessed_pseudogene	Gm47446	ENSMUST00000222650	unprocessed_pseudogene		12	-1	24179269	550
ENSMUSG00000047861	protein_coding	Foxi1	ENSMUST00000060271	protein_coding	principal1	11	-1	34208089	2357
ENSMUSG00000101792	processed_transcript	Gm28447	ENSMUST00000186283	retained_intron		10	-1	61592217	977
ENSMUSG00000074218	protein_coding	Cox7a1	ENSMUST00000208441	protein_coding		7	1	30184194	485
ENSMUSG00000112975	processed_pseudogene	Gm21297	ENSMUST00000169148	processed_pseudogene		12	-1	24252181	126
ENSMUSG00000006058	protein_coding	Snf8	ENSMUST00000006217	protein_coding	principal1	11	1	96034885	1004
ENSMUSG00000069296	protein_coding	Vmn1r195	ENSMUST00000228711	protein_coding	principal1	13	1	22270522	3056
ENSMUSG00000020090	protein_coding	Npffr1	ENSMUST00000020287	protein_coding	principal1	10	1	61595492	3479
ENSMUSG00000069296	protein_coding	Vmn1r195	ENSMUST00000091736	protein_coding	principal1	13	1	22278317	1088
ENSMUSG00000018907	protein_coding	Alox12e	ENSMUST00000019051	protein_coding	principal1	11	-1	70322628	2422
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000220377	protein_coding	principal2	10	-1	123196995	11525
ENSMUSG00000016427	protein_coding	Ndufa1	ENSMUST00000016571	protein_coding	principal1	X	-1	37191163	419
ENSMUSG00000114120	unprocessed_pseudogene	Gm4120	ENSMUST00000220456	unprocessed_pseudogene		12	-1	24308251	578
ENSMUSG00000006058	protein_coding	Snf8	ENSMUST00000150946	processed_transcript		11	1	96034951	484
ENSMUSG00000113417	processed_pseudogene	Gm47478	ENSMUST00000222165	processed_pseudogene		12	-1	24367480	120
ENSMUSG00000117868	lincRNA	Gm50165	ENSMUST00000236079	lincRNA		18	-1	67031518	2079
ENSMUSG00000006058	protein_coding	Snf8	ENSMUST00000156524	processed_transcript		11	1	96034956	665
ENSMUSG00000109180	unprocessed_pseudogene	Gm44654	ENSMUST00000208052	unprocessed_pseudogene		7	-1	18667963	329
ENSMUSG00000006058	protein_coding	Snf8	ENSMUST00000107700	protein_coding		11	1	96034965	849
ENSMUSG00000018907	protein_coding	Alox12e	ENSMUST00000123752	retained_intron		11	-1	70321577	793
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000020334	protein_coding	alternative1	10	-1	123196953	4666
ENSMUSG00000006058	protein_coding	Snf8	ENSMUST00000145749	processed_transcript		11	1	96044690	1764
ENSMUSG00000036743	protein_coding	Psma8	ENSMUST00000040860	protein_coding	principal1	18	1	14706151	1692
ENSMUSG00000018907	protein_coding	Alox12e	ENSMUST00000139899	retained_intron		11	-1	70321854	692
ENSMUSG00000095546	protein_coding	Gm10230	ENSMUST00000119362	protein_coding	principal1	X	-1	27494882	867
ENSMUSG00000036537	protein_coding	Rnf113a1	ENSMUST00000046433	protein_coding	principal1	X	1	37191245	1223
ENSMUSG00000006058	protein_coding	Snf8	ENSMUST00000156394	processed_transcript		11	1	96044824	679
ENSMUSG00000018907	protein_coding	Alox12e	ENSMUST00000149060	retained_intron		11	-1	70322448	707
ENSMUSG00000055416	processed_pseudogene	Fam136b-ps	ENSMUST00000068987	processed_pseudogene		15	1	31276491	412
ENSMUSG00000036743	protein_coding	Psma8	ENSMUST00000234680	protein_coding		18	1	14706189	1023
ENSMUSG00000021335	protein_coding	Slc17a1	ENSMUST00000130211	protein_coding		13	1	23867750	551
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000097822	protein_coding	principal1	4	1	139380659	15928
ENSMUSG00000095546	protein_coding	Gm10230	ENSMUST00000178745	protein_coding	principal1	X	-1	27493313	639
ENSMUSG00000098227	processed_pseudogene	Gm4812	ENSMUST00000182847	processed_pseudogene		13	1	69345655	993
ENSMUSG00000102109	unprocessed_pseudogene	Gm29563	ENSMUST00000187249	unprocessed_pseudogene		7	-1	47776212	496
ENSMUSG00000113595	lincRNA	Gm35514	ENSMUST00000221615	lincRNA		13	1	69395583	352
ENSMUSG00000027070	protein_coding	Lrp2	ENSMUST00000080953	protein_coding	principal1	2	-1	69586065	15460
ENSMUSG00000102068	unprocessed_pseudogene	Mrgprc7-ps	ENSMUST00000187169	unprocessed_pseudogene		7	1	47810037	952
ENSMUSG00000095321	unprocessed_pseudogene	Gm2092	ENSMUST00000178887	unprocessed_pseudogene		X	-1	27598375	639
ENSMUSG00000036743	protein_coding	Psma8	ENSMUST00000234869	nonsense_mediated_decay		18	1	14706189	1214
ENSMUSG00000086147	protein_coding	Zfp989	ENSMUST00000146688	protein_coding	principal1	4	1	146971976	2295
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000133220	processed_transcript		4	1	139380669	1626
ENSMUSG00000086147	protein_coding	Zfp989	ENSMUST00000132166	processed_transcript		4	1	146972002	309
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000129949	protein_coding		4	1	139414470	6195
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000219937	retained_intron		10	-1	123127885	1587
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000132064	protein_coding		1	-1	9298573	4165
ENSMUSG00000036743	protein_coding	Psma8	ENSMUST00000234177	nonsense_mediated_decay		18	1	14706193	493
ENSMUSG00000036743	protein_coding	Psma8	ENSMUST00000234922	nonsense_mediated_decay		18	1	14706203	1918
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000218042	retained_intron		10	-1	123119481	443
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000191683	protein_coding		1	-1	9298864	4510
ENSMUSG00000115418	TEC	Gm49296	ENSMUST00000228063	TEC		15	1	31282089	1048
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000149995	retained_intron		4	1	139416212	614
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000135267	protein_coding		1	1	172482199	775
ENSMUSG00000027070	protein_coding	Lrp2	ENSMUST00000100051	protein_coding		2	-1	69586029	4359
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000129779	protein_coding		4	1	139435010	612
ENSMUSG00000027070	protein_coding	Lrp2	ENSMUST00000092551	protein_coding		2	-1	69586029	2228
ENSMUSG00000021712	protein_coding	Trim23	ENSMUST00000022225	protein_coding	principal1	13	1	104178797	3416
ENSMUSG00000036743	protein_coding	Psma8	ENSMUST00000234318	retained_intron		18	1	14726523	432
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000136230	retained_intron		4	1	139463259	629
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000140295	protein_coding	principal1	1	-1	9299238	4887
ENSMUSG00000023235	protein_coding	Ccl25	ENSMUST00000155797	nonsense_mediated_decay		8	1	4325210	1061
ENSMUSG00000027070	protein_coding	Lrp2	ENSMUST00000128742	processed_transcript		2	-1	69509145	392
ENSMUSG00000026442	protein_coding	Nfasc	ENSMUST00000094569	protein_coding	principal3	1	-1	132741757	9739
ENSMUSG00000021712	protein_coding	Trim23	ENSMUST00000069187	protein_coding		13	1	104178839	3546
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000145273	retained_intron		4	1	139477053	627
ENSMUSG00000081436	processed_pseudogene	Gm5912	ENSMUST00000122282	processed_pseudogene		8	1	95577471	1438
ENSMUSG00000036743	protein_coding	Psma8	ENSMUST00000235037	retained_intron		18	1	14726546	576
ENSMUSG00000023235	protein_coding	Ccl25	ENSMUST00000069762	non_stop_decay		8	1	4325227	485
ENSMUSG00000111927	lincRNA	Gm47770	ENSMUST00000220318	lincRNA		10	-1	17526914	1357
ENSMUSG00000110447	lincRNA	Gm31518	ENSMUST00000211925	lincRNA		8	1	95593422	2548
ENSMUSG00000110447	lincRNA	Gm31518	ENSMUST00000212011	lincRNA		8	1	95593522	2322
ENSMUSG00000110447	lincRNA	Gm31518	ENSMUST00000213099	lincRNA		8	1	95601519	2320
ENSMUSG00000112629	lincRNA	Gm47771	ENSMUST00000219966	lincRNA		10	-1	17658513	253
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000145659	processed_transcript		4	1	139478944	617
ENSMUSG00000110447	lincRNA	Gm31518	ENSMUST00000213069	lincRNA		8	1	95601531	690
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000141327	retained_intron		4	1	139479127	861
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000140814	processed_transcript		1	1	172482206	645
ENSMUSG00000100179	unprocessed_pseudogene	Gm21715	ENSMUST00000191056	unprocessed_pseudogene		Y	-1	74012158	694
ENSMUSG00000023235	protein_coding	Ccl25	ENSMUST00000098949	nonsense_mediated_decay		8	1	4325230	1109
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000135534	retained_intron		4	1	139480380	682
ENSMUSG00000108454	unprocessed_pseudogene	Gm44932	ENSMUST00000206799	unprocessed_pseudogene		16	-1	16672510	121
ENSMUSG00000023235	protein_coding	Ccl25	ENSMUST00000207839	retained_intron		8	1	4325233	2461
ENSMUSG00000048101	protein_coding	Olfr19	ENSMUST00000206365	protein_coding	principal1	16	-1	16676405	1967
ENSMUSG00000066036	protein_coding	Ubr4	ENSMUST00000165860	protein_coding		4	1	139380659	15798
ENSMUSG00000021712	protein_coding	Trim23	ENSMUST00000069174	protein_coding		13	1	104179098	4258
ENSMUSG00000048101	protein_coding	Olfr19	ENSMUST00000057886	protein_coding	principal1	16	-1	16674017	1142
ENSMUSG00000002068	protein_coding	Ccne1	ENSMUST00000108023	protein_coding	principal1	7	-1	38107534	2000
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000219413	retained_intron		10	-1	123147330	2074
ENSMUSG00000067931	protein_coding	Zfp948	ENSMUST00000088787	protein_coding	principal1	17	1	21567008	2652
ENSMUSG00000110483	lincRNA	Gm45702	ENSMUST00000211856	lincRNA		8	-1	95630391	644
ENSMUSG00000002068	protein_coding	Ccne1	ENSMUST00000128785	retained_intron		7	-1	38099501	628
ENSMUSG00000037331	protein_coding	Larp1	ENSMUST00000071487	protein_coding	alternative2	11	1	58009064	6614
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000140302	nonsense_mediated_decay		1	-1	9299878	4056
ENSMUSG00000002068	protein_coding	Ccne1	ENSMUST00000137097	processed_transcript		7	-1	38099369	462
ENSMUSG00000106938	lincRNA	Gm31314	ENSMUST00000201435	lincRNA		5	-1	119527954	609
ENSMUSG00000053134	protein_coding	Supt7l	ENSMUST00000065388	protein_coding	principal1	5	-1	31526773	2693
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000115484	processed_transcript		1	-1	8470520	1107
ENSMUSG00000002068	protein_coding	Ccne1	ENSMUST00000130329	protein_coding		7	-1	38106908	608
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000077680	protein_coding	principal1	X	1	7762658	3277
ENSMUSG00000037331	protein_coding	Larp1	ENSMUST00000140500	retained_intron		11	1	58041613	747
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000135046	processed_transcript		1	-1	8470479	578
ENSMUSG00000002068	protein_coding	Ccne1	ENSMUST00000124979	nonsense_mediated_decay		7	-1	38107502	656
ENSMUSG00000116096	lincRNA	4933404G15Rik	ENSMUST00000230601	lincRNA		16	-1	16718096	1631
ENSMUSG00000053134	protein_coding	Supt7l	ENSMUST00000201769	protein_coding	principal1	5	-1	31526736	2548
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000144593	nonsense_mediated_decay		1	-1	9299282	3497
ENSMUSG00000037331	protein_coding	Larp1	ENSMUST00000178636	protein_coding	principal2	11	1	58009064	6617
ENSMUSG00000053134	protein_coding	Supt7l	ENSMUST00000200721	protein_coding		5	-1	31525268	1657
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000134075	retained_intron		1	-1	9299509	2944
ENSMUSG00000053134	protein_coding	Supt7l	ENSMUST00000202421	protein_coding		5	-1	31526731	3056
ENSMUSG00000032965	protein_coding	Ift57	ENSMUST00000046777	protein_coding	principal1	16	1	49699233	2601
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000194098	retained_intron		1	-1	8952422	2113
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000126083	processed_transcript		1	-1	9298236	661
ENSMUSG00000025909	protein_coding	Sntg1	ENSMUST00000115488	protein_coding	principal1	1	-1	8803943	1554
ENSMUSG00000102253	TEC	Gm38259	ENSMUST00000194602	TEC		1	-1	8531313	3534
ENSMUSG00000103933	processed_pseudogene	Gm36964	ENSMUST00000191876	processed_pseudogene		1	1	8815842	198
ENSMUSG00000053134	protein_coding	Supt7l	ENSMUST00000202932	retained_intron		5	-1	31527807	1899
ENSMUSG00000032965	protein_coding	Ift57	ENSMUST00000142682	protein_coding		16	1	49699304	1582
ENSMUSG00000053134	protein_coding	Supt7l	ENSMUST00000201692	retained_intron		5	-1	31526702	1246
ENSMUSG00000102871	TEC	Gm37143	ENSMUST00000195180	TEC		1	1	9286922	3259
ENSMUSG00000086235	processed_pseudogene	Gm16284	ENSMUST00000140995	processed_pseudogene		1	-1	8468825	400
ENSMUSG00000032965	protein_coding	Ift57	ENSMUST00000127784	processed_transcript		16	1	49699355	434
ENSMUSG00000066693	processed_pseudogene	Gm7493	ENSMUST00000085919	processed_pseudogene		1	-1	8963621	626
ENSMUSG00000086195	processed_pseudogene	Gm6152	ENSMUST00000151704	processed_pseudogene		1	-1	8856267	340
ENSMUSG00000032965	protein_coding	Ift57	ENSMUST00000140914	protein_coding		16	1	49710922	1101
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000201294	retained_intron		5	1	31526995	2053
ENSMUSG00000031669	protein_coding	Gins3	ENSMUST00000034094	protein_coding	principal1	8	1	95633453	2519
ENSMUSG00000090013	lincRNA	Gm6507	ENSMUST00000159767	lincRNA		6	-1	89186025	652
ENSMUSG00000026442	protein_coding	Nfasc	ENSMUST00000043189	protein_coding	alternative2	1	-1	132707326	5072
ENSMUSG00000108221	processed_pseudogene	Gm44203	ENSMUST00000203134	processed_pseudogene		6	1	89201253	307
ENSMUSG00000031669	protein_coding	Gins3	ENSMUST00000212434	protein_coding		8	1	95633554	654
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000079542	protein_coding		X	1	7762664	3163
ENSMUSG00000053552	protein_coding	Ebf4	ENSMUST00000110288	protein_coding		2	1	130295169	2982
ENSMUSG00000110701	processed_pseudogene	Gm6013	ENSMUST00000212264	processed_pseudogene		8	-1	95675394	699
ENSMUSG00000026442	protein_coding	Nfasc	ENSMUST00000187861	protein_coding	alternative2	1	-1	132707406	4927
ENSMUSG00000030942	protein_coding	Thumpd1	ENSMUST00000033236	protein_coding	principal1	7	-1	119720798	2689
ENSMUSG00000105709	antisense	Gm42723	ENSMUST00000200561	antisense		19	-1	38315270	1254
ENSMUSG00000105709	antisense	Gm42723	ENSMUST00000199966	antisense		19	-1	38315255	1044
ENSMUSG00000030942	protein_coding	Thumpd1	ENSMUST00000209175	retained_intron		7	-1	119720764	744
ENSMUSG00000079293	polymorphic_pseudogene	Clec7a	ENSMUST00000195589	polymorphic_pseudogene		6	-1	129472772	2272
ENSMUSG00000023235	protein_coding	Ccl25	ENSMUST00000127460	protein_coding	alternative2	8	1	4325233	867
ENSMUSG00000026442	protein_coding	Nfasc	ENSMUST00000163770	protein_coding	alternative2	1	-1	132741763	3903
ENSMUSG00000116945	processed_pseudogene	Gm49663	ENSMUST00000231624	processed_pseudogene		16	1	36580461	254
ENSMUSG00000116685	processed_pseudogene	Gm49664	ENSMUST00000232612	processed_pseudogene		16	-1	36577715	150
ENSMUSG00000023235	protein_coding	Ccl25	ENSMUST00000136191	protein_coding		8	1	4325236	395
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000115679	protein_coding		X	1	7762676	3239
ENSMUSG00000079293	polymorphic_pseudogene	Clec7a	ENSMUST00000184581	protein_coding	principal2	6	-1	129472777	707
ENSMUSG00000026442	protein_coding	Nfasc	ENSMUST00000186389	protein_coding		1	-1	132637091	3476
ENSMUSG00000023235	protein_coding	Ccl25	ENSMUST00000153254	processed_transcript		8	1	4325241	362
ENSMUSG00000116961	lincRNA	Gm49662	ENSMUST00000231896	lincRNA		16	-1	36598323	528
ENSMUSG00000079293	polymorphic_pseudogene	Clec7a	ENSMUST00000184861	retained_intron		6	-1	129472779	655
ENSMUSG00000116961	lincRNA	Gm49662	ENSMUST00000232190	lincRNA		16	-1	36581009	669
ENSMUSG00000023235	protein_coding	Ccl25	ENSMUST00000207925	retained_intron		8	1	4332259	2549
ENSMUSG00000116961	lincRNA	Gm49662	ENSMUST00000231296	lincRNA		16	-1	36598497	265
ENSMUSG00000029368	protein_coding	Alb	ENSMUST00000031314	protein_coding	principal1	5	1	90460897	2034
ENSMUSG00000026442	protein_coding	Nfasc	ENSMUST00000186330	processed_transcript		1	-1	132587140	172
ENSMUSG00000117209	processed_pseudogene	Gm49954	ENSMUST00000232712	processed_pseudogene		17	1	21613612	211
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000219992	retained_intron		10	-1	123196966	2603
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000202016	retained_intron		5	1	31526997	1490
ENSMUSG00000029368	protein_coding	Alb	ENSMUST00000201737	processed_transcript		5	1	90462319	331
ENSMUSG00000079293	polymorphic_pseudogene	Clec7a	ENSMUST00000112076	protein_coding	alternative2	6	-1	129472777	2277
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000218079	retained_intron		10	-1	123181801	2013
ENSMUSG00000026442	protein_coding	Nfasc	ENSMUST00000188307	protein_coding		1	-1	132741797	3049
ENSMUSG00000029368	protein_coding	Alb	ENSMUST00000201356	processed_transcript		5	1	90462700	331
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000217985	retained_intron		10	-1	123196927	2243
ENSMUSG00000083704	processed_pseudogene	Gm13153	ENSMUST00000120969	processed_pseudogene		4	1	147040685	637
ENSMUSG00000102128	unprocessed_pseudogene	Gm18349	ENSMUST00000187440	unprocessed_pseudogene		7	-1	47824245	904
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000220284	retained_intron		10	-1	123196941	1477
ENSMUSG00000026442	protein_coding	Nfasc	ENSMUST00000186539	retained_intron		1	-1	132605159	750
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000219010	retained_intron		10	-1	123196926	2840
ENSMUSG00000053552	protein_coding	Ebf4	ENSMUST00000110286	protein_coding	principal1	2	1	130295939	2670
ENSMUSG00000033916	protein_coding	Chmp2a	ENSMUST00000210587	protein_coding	principal1	7	-1	13034651	930
ENSMUSG00000026442	protein_coding	Nfasc	ENSMUST00000191294	retained_intron		1	-1	132624512	3314
ENSMUSG00000020124	protein_coding	Usp15	ENSMUST00000219619	protein_coding		10	-1	123196926	414
ENSMUSG00000026442	protein_coding	Nfasc	ENSMUST00000189219	processed_transcript		1	-1	132741778	326
ENSMUSG00000112879	processed_pseudogene	Gm47726	ENSMUST00000219693	processed_pseudogene		10	-1	123178684	361
ENSMUSG00000038256	protein_coding	Bcl9	ENSMUST00000046521	protein_coding	principal1	3	-1	97227364	6102
ENSMUSG00000101126	antisense	Gm10538	ENSMUST00000189499	antisense		1	1	132729355	1877
ENSMUSG00000023235	protein_coding	Ccl25	ENSMUST00000110982	protein_coding	alternative2	8	1	4349588	823
ENSMUSG00000112294	bidirectional_promoter_lncRNA	Gm4129	ENSMUST00000220083	bidirectional_promoter_lncRNA		10	1	123196695	625
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000127712	retained_intron		2	-1	132542031	4356
ENSMUSG00000057880	protein_coding	Abat	ENSMUST00000065987	protein_coding	principal1	16	1	8513429	4636
ENSMUSG00000117528	lincRNA	Gm50017	ENSMUST00000234695	lincRNA		17	1	29979320	631
ENSMUSG00000117799	lincRNA	Gm50295	ENSMUST00000236359	lincRNA		17	-1	27051414	515
ENSMUSG00000033916	protein_coding	Chmp2a	ENSMUST00000211344	protein_coding		7	-1	13034644	606
ENSMUSG00000038256	protein_coding	Bcl9	ENSMUST00000132266	processed_transcript		3	-1	97214009	679
ENSMUSG00000117639	processed_pseudogene	Gm50018	ENSMUST00000235061	processed_pseudogene		17	-1	29983988	309
ENSMUSG00000023235	protein_coding	Ccl25	ENSMUST00000024004	protein_coding	principal2	8	1	4349588	1058
ENSMUSG00000053552	protein_coding	Ebf4	ENSMUST00000134728	retained_intron		2	1	130295939	2835
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000137467	protein_coding		X	1	7762695	3390
ENSMUSG00000117371	bidirectional_promoter_lncRNA	Gm50019	ENSMUST00000234271	bidirectional_promoter_lncRNA		17	-1	30004691	594
ENSMUSG00000053552	protein_coding	Ebf4	ENSMUST00000126740	nonsense_mediated_decay		2	1	130295939	2740
ENSMUSG00000033916	protein_coding	Chmp2a	ENSMUST00000209487	retained_intron		7	-1	13034670	888
ENSMUSG00000057880	protein_coding	Abat	ENSMUST00000115838	protein_coding		16	1	8513481	1348
ENSMUSG00000067919	protein_coding	Rex2	ENSMUST00000075775	protein_coding	principal1	4	1	147021850	3993
ENSMUSG00000038256	protein_coding	Bcl9	ENSMUST00000141861	retained_intron		3	-1	97228330	2500
ENSMUSG00000053552	protein_coding	Ebf4	ENSMUST00000140169	nonsense_mediated_decay		2	1	130295939	2554
ENSMUSG00000038256	protein_coding	Bcl9	ENSMUST00000134695	processed_transcript		3	-1	97228846	421
ENSMUSG00000033916	protein_coding	Chmp2a	ENSMUST00000005711	protein_coding	principal1	7	-1	13034807	949
ENSMUSG00000117371	bidirectional_promoter_lncRNA	Gm50019	ENSMUST00000233996	bidirectional_promoter_lncRNA		17	-1	30004660	445
ENSMUSG00000053552	protein_coding	Ebf4	ENSMUST00000110287	protein_coding		2	1	130295939	2580
ENSMUSG00000115468	lincRNA	Gm49217	ENSMUST00000226148	lincRNA		14	1	31323955	557
ENSMUSG00000067919	protein_coding	Rex2	ENSMUST00000150197	retained_intron		4	1	147021878	573
ENSMUSG00000038256	protein_coding	Bcl9	ENSMUST00000135247	processed_transcript		3	-1	97227535	353
ENSMUSG00000057880	protein_coding	Abat	ENSMUST00000140795	retained_intron		16	1	8513483	2665
ENSMUSG00000038256	protein_coding	Bcl9	ENSMUST00000196586	processed_transcript		3	-1	97297917	453
ENSMUSG00000046093	protein_coding	Hpcal4	ENSMUST00000059667	protein_coding	principal1	4	1	123183227	4931
ENSMUSG00000115445	lincRNA	Gm49791	ENSMUST00000226792	lincRNA		14	-1	31326006	367
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000171445	protein_coding	alternative2	7	1	4460715	2975
ENSMUSG00000033916	protein_coding	Chmp2a	ENSMUST00000211626	protein_coding		7	-1	13034739	726
ENSMUSG00000038256	protein_coding	Bcl9	ENSMUST00000127319	retained_intron		3	-1	97224209	405
ENSMUSG00000046093	protein_coding	Hpcal4	ENSMUST00000106246	protein_coding	principal1	4	1	123183239	1627
ENSMUSG00000033916	protein_coding	Chmp2a	ENSMUST00000211369	nonsense_mediated_decay		7	-1	13034725	521
ENSMUSG00000117070	lincRNA	Gm41541	ENSMUST00000233101	lincRNA		17	-1	21650474	464
ENSMUSG00000008035	protein_coding	Mid1ip1	ENSMUST00000125623	processed_transcript		X	1	10715013	106
ENSMUSG00000038256	protein_coding	Bcl9	ENSMUST00000166341	protein_coding	principal1	3	-1	97216507	4652
ENSMUSG00000046093	protein_coding	Hpcal4	ENSMUST00000126995	protein_coding		4	1	123183499	403
ENSMUSG00000106536	TEC	Gm42508	ENSMUST00000199972	TEC		3	1	97262355	3292
ENSMUSG00000057880	protein_coding	Abat	ENSMUST00000115839	protein_coding		16	1	8513485	2414
ENSMUSG00000117013	transcribed_processed_pseudogene	Gm30531	ENSMUST00000232793	processed_transcript		17	1	21615500	771
ENSMUSG00000024660	protein_coding	Incenp	ENSMUST00000025562	protein_coding	principal2	19	-1	9899551	3236
ENSMUSG00000046093	protein_coding	Hpcal4	ENSMUST00000136619	processed_transcript		4	1	123183516	508
ENSMUSG00000104745	TEC	Gm43073	ENSMUST00000198200	TEC		3	-1	97275064	1189
ENSMUSG00000057880	protein_coding	Abat	ENSMUST00000138987	protein_coding		16	1	8572902	696
ENSMUSG00000117013	transcribed_processed_pseudogene	Gm30531	ENSMUST00000233749	processed_transcript		17	1	21615501	836
ENSMUSG00000008035	protein_coding	Mid1ip1	ENSMUST00000144356	protein_coding		X	1	10715019	447
ENSMUSG00000057880	protein_coding	Abat	ENSMUST00000144444	protein_coding		16	1	8583627	922
ENSMUSG00000117013	transcribed_processed_pseudogene	Gm30531	ENSMUST00000232774	transcribed_processed_pseudogene		17	1	21632782	2354
ENSMUSG00000046093	protein_coding	Hpcal4	ENSMUST00000152194	protein_coding		4	1	123183729	600
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000143680	retained_intron		X	1	7762697	4717
ENSMUSG00000106301	processed_pseudogene	Gm8365	ENSMUST00000197334	processed_pseudogene		5	-1	106738764	648
ENSMUSG00000057880	protein_coding	Abat	ENSMUST00000128459	processed_transcript		16	1	8612878	386
ENSMUSG00000039910	protein_coding	Cited2	ENSMUST00000038107	protein_coding	principal1	10	1	17723218	1979
ENSMUSG00000035868	protein_coding	Zfp983	ENSMUST00000232827	protein_coding	principal1	17	1	21650624	4354
ENSMUSG00000035868	protein_coding	Zfp983	ENSMUST00000039726	protein_coding	principal1	17	1	21657582	1383
ENSMUSG00000031605	protein_coding	Klhl2	ENSMUST00000034017	protein_coding	principal1	8	-1	64850017	3412
ENSMUSG00000086417	antisense	Gm12996	ENSMUST00000151670	antisense		4	1	116824903	636
ENSMUSG00000075390	processed_pseudogene	Rpl36-ps8	ENSMUST00000121187	processed_pseudogene		4	-1	116840221	315
ENSMUSG00000039910	protein_coding	Cited2	ENSMUST00000219558	protein_coding	principal1	10	1	17723233	2411
ENSMUSG00000031605	protein_coding	Klhl2	ENSMUST00000210166	protein_coding		8	-1	64849924	5126
ENSMUSG00000103679	antisense	Gm37623	ENSMUST00000193691	antisense		1	-1	40697636	803
ENSMUSG00000082841	processed_pseudogene	Gm12994	ENSMUST00000119601	processed_pseudogene		4	1	116852664	447
ENSMUSG00000109233	lincRNA	Gm44866	ENSMUST00000208774	lincRNA		7	-1	119735760	391
ENSMUSG00000031605	protein_coding	Klhl2	ENSMUST00000209919	retained_intron		8	-1	64754971	3814
ENSMUSG00000024660	protein_coding	Incenp	ENSMUST00000238129	retained_intron		19	-1	9899461	3449
ENSMUSG00000093617	antisense	4933438K21Rik	ENSMUST00000175787	antisense		4	-1	147068436	1693
ENSMUSG00000039910	protein_coding	Cited2	ENSMUST00000218370	protein_coding		10	1	17723242	376
ENSMUSG00000094017	processed_pseudogene	Gm13160	ENSMUST00000118441	processed_pseudogene		4	-1	147086984	627
ENSMUSG00000024660	protein_coding	Incenp	ENSMUST00000238004	protein_coding		19	-1	9874923	577
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000115680	nonsense_mediated_decay		X	1	7762767	3103
ENSMUSG00000024660	protein_coding	Incenp	ENSMUST00000237439	protein_coding	alternative2	19	-1	9895460	2643
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000167810	protein_coding		7	1	4464493	657
ENSMUSG00000031605	protein_coding	Klhl2	ENSMUST00000209458	processed_transcript		8	-1	64799664	769
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000144900	protein_coding		X	1	7763943	408
ENSMUSG00000024660	protein_coding	Incenp	ENSMUST00000235358	retained_intron		19	-1	9878639	478
ENSMUSG00000109437	TEC	Gm45072	ENSMUST00000208673	TEC		7	1	51631725	929
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000170423	retained_intron		7	1	4464735	295
ENSMUSG00000024660	protein_coding	Incenp	ENSMUST00000236533	retained_intron		19	-1	9885509	349
ENSMUSG00000031605	protein_coding	Klhl2	ENSMUST00000209544	processed_transcript		8	-1	64842197	321
ENSMUSG00000073243	protein_coding	Gm9	ENSMUST00000101636	protein_coding	principal1	X	-1	37211041	817
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000115677	protein_coding		X	1	7763959	2943
ENSMUSG00000024660	protein_coding	Incenp	ENSMUST00000237655	retained_intron		19	-1	9885508	489
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000167599	retained_intron		7	1	4464742	472
ENSMUSG00000109879	TEC	Gm10997	ENSMUST00000210294	TEC		8	-1	64809138	1500
ENSMUSG00000100153	transcribed_processed_pseudogene	Ppp1ccb	ENSMUST00000207161	processed_transcript		7	1	119739926	1437
ENSMUSG00000109854	antisense	Gm45345	ENSMUST00000211427	antisense		8	1	64838234	555
ENSMUSG00000100153	transcribed_processed_pseudogene	Ppp1ccb	ENSMUST00000118909	transcribed_processed_pseudogene		7	1	119740128	972
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000086372	protein_coding	principal2	7	1	4464742	2522
ENSMUSG00000040028	protein_coding	Elavl1	ENSMUST00000098950	protein_coding	principal1	8	-1	4325413	5743
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000101695	protein_coding		X	1	7764041	2989
ENSMUSG00000114136	antisense	4921511I17Rik	ENSMUST00000220545	antisense		12	-1	12392615	1341
ENSMUSG00000024660	protein_coding	Incenp	ENSMUST00000237725	protein_coding		19	-1	9899381	637
ENSMUSG00000030168	protein_coding	Adipor2	ENSMUST00000032272	protein_coding	principal1	6	-1	119417704	4184
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000115678	protein_coding		X	1	7764087	2658
ENSMUSG00000073448	processed_pseudogene	Gm10509	ENSMUST00000097384	processed_pseudogene		17	1	21690180	843
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000169820	protein_coding		7	1	4464769	419
ENSMUSG00000040028	protein_coding	Elavl1	ENSMUST00000209010	protein_coding	principal1	8	-1	4312619	2317
ENSMUSG00000008035	protein_coding	Mid1ip1	ENSMUST00000115524	protein_coding	principal1	X	1	10717390	2022
ENSMUSG00000081405	processed_pseudogene	Gm13142	ENSMUST00000117213	processed_pseudogene		4	1	147102327	1453
ENSMUSG00000036450	protein_coding	Hif1an	ENSMUST00000131032	retained_intron		19	1	44562850	868
ENSMUSG00000071773	protein_coding	Rhox1	ENSMUST00000115210	protein_coding	principal1	X	-1	37222258	883
ENSMUSG00000040028	protein_coding	Elavl1	ENSMUST00000207615	retained_intron		8	-1	4315495	4808
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000126694	retained_intron		X	1	7764652	6328
ENSMUSG00000024660	protein_coding	Incenp	ENSMUST00000237147	protein_coding		19	-1	9899489	574
ENSMUSG00000000134	protein_coding	Tfe3	ENSMUST00000133456	retained_intron		X	1	7769430	663
ENSMUSG00000040028	protein_coding	Elavl1	ENSMUST00000208987	retained_intron		8	-1	4325086	613
ENSMUSG00000030168	protein_coding	Adipor2	ENSMUST00000169744	protein_coding	principal1	6	-1	119388686	3489
ENSMUSG00000109404	processed_pseudogene	Gm19963	ENSMUST00000208413	processed_pseudogene		7	-1	119744110	1255
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000163893	protein_coding	principal2	7	1	4464849	3868
ENSMUSG00000008035	protein_coding	Mid1ip1	ENSMUST00000008179	protein_coding	principal1	X	1	10717390	2019
ENSMUSG00000008035	protein_coding	Mid1ip1	ENSMUST00000156321	protein_coding		X	1	10717468	431
ENSMUSG00000022744	protein_coding	Cldnd1	ENSMUST00000023426	protein_coding	principal1	16	1	58727910	2147
ENSMUSG00000030168	protein_coding	Adipor2	ENSMUST00000187699	nonsense_mediated_decay		6	-1	119390248	1672
ENSMUSG00000085587	antisense	Gm14493	ENSMUST00000141174	antisense		X	-1	10718710	543
ENSMUSG00000046324	protein_coding	Ermp1	ENSMUST00000159692	protein_coding	principal1	19	-1	29648415	7058
ENSMUSG00000030168	protein_coding	Adipor2	ENSMUST00000188851	retained_intron		6	-1	119417690	2433
ENSMUSG00000085058	processed_transcript	8030453O22Rik	ENSMUST00000128919	antisense		6	1	39527513	370
ENSMUSG00000030168	protein_coding	Adipor2	ENSMUST00000189710	protein_coding		6	-1	119417475	579
ENSMUSG00000067928	protein_coding	Zfp760	ENSMUST00000073312	protein_coding	principal1	17	1	21707741	4209
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000163137	nonsense_mediated_decay		7	1	4464861	3154
ENSMUSG00000085058	processed_transcript	8030453O22Rik	ENSMUST00000135363	antisense		6	1	39527522	1506
ENSMUSG00000046324	protein_coding	Ermp1	ENSMUST00000161749	processed_transcript		19	-1	29612235	525
ENSMUSG00000085058	processed_transcript	8030453O22Rik	ENSMUST00000200951	retained_intron		6	1	39527526	749
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000170635	protein_coding		7	1	4464869	683
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000167068	processed_transcript		7	1	4473931	412
ENSMUSG00000022744	protein_coding	Cldnd1	ENSMUST00000162057	protein_coding	principal1	16	1	58727925	1540
ENSMUSG00000031157	protein_coding	Pqbp1	ENSMUST00000033497	protein_coding	principal1	X	-1	7899269	1104
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000168924	processed_transcript		7	1	4477428	249
ENSMUSG00000006154	protein_coding	Eps8l1	ENSMUST00000164987	nonsense_mediated_decay		7	1	4477666	676
ENSMUSG00000022744	protein_coding	Cldnd1	ENSMUST00000159944	nonsense_mediated_decay		16	1	58728023	805
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000186733	protein_coding	principal1	1	-1	30873581	7567
ENSMUSG00000030500	protein_coding	Slc17a6	ENSMUST00000032710	protein_coding	principal1	7	1	51622006	4137
ENSMUSG00000091177	antisense	Gm15494	ENSMUST00000146199	antisense		7	-1	4471249	307
ENSMUSG00000091177	antisense	Gm15494	ENSMUST00000171665	antisense		7	-1	4471285	451
ENSMUSG00000018634	protein_coding	Crhr1	ENSMUST00000093925	protein_coding	principal1	11	1	104132855	2460
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000191329	protein_coding		1	-1	30810712	2939
ENSMUSG00000102835	lincRNA	Gm37572	ENSMUST00000194043	lincRNA		Y	1	15241461	1493
ENSMUSG00000022744	protein_coding	Cldnd1	ENSMUST00000159829	processed_transcript		16	1	58728039	581
ENSMUSG00000031157	protein_coding	Pqbp1	ENSMUST00000115655	protein_coding	principal1	X	-1	7898979	1148
ENSMUSG00000030500	protein_coding	Slc17a6	ENSMUST00000207945	nonsense_mediated_decay		7	1	51622299	2710
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000190190	retained_intron		1	-1	30809105	543
ENSMUSG00000038406	protein_coding	Scaf1	ENSMUST00000211735	protein_coding	principal1	7	-1	45014404	4209
ENSMUSG00000022744	protein_coding	Cldnd1	ENSMUST00000162191	protein_coding		16	1	58728048	491
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000187316	retained_intron		1	-1	30813535	583
ENSMUSG00000036450	protein_coding	Hif1an	ENSMUST00000040455	protein_coding	principal1	19	1	44562850	6194
ENSMUSG00000037440	protein_coding	Vnn1	ENSMUST00000041416	protein_coding	principal1	10	1	23894688	2416
ENSMUSG00000022744	protein_coding	Cldnd1	ENSMUST00000162249	retained_intron		16	1	58732264	597
ENSMUSG00000102835	lincRNA	Gm37572	ENSMUST00000195046	lincRNA		Y	1	15241915	431
ENSMUSG00000031157	protein_coding	Pqbp1	ENSMUST00000115654	protein_coding	principal1	X	-1	7899199	1374
ENSMUSG00000102835	lincRNA	Gm37572	ENSMUST00000192579	lincRNA		Y	1	15241915	612
ENSMUSG00000115265	processed_pseudogene	Gm18153	ENSMUST00000228494	processed_pseudogene		15	1	44959341	407
ENSMUSG00000037798	protein_coding	Mat1a	ENSMUST00000225720	protein_coding	principal1	14	1	41105035	3468
ENSMUSG00000030500	protein_coding	Slc17a6	ENSMUST00000207375	processed_transcript		7	1	51625148	655
ENSMUSG00000038079	protein_coding	Tmem237	ENSMUST00000094917	protein_coding	principal4	1	-1	59120094	1869
ENSMUSG00000096403	processed_pseudogene	Rnps1-ps	ENSMUST00000178598	processed_pseudogene		6	-1	7983383	843
ENSMUSG00000031157	protein_coding	Pqbp1	ENSMUST00000156741	protein_coding		X	-1	7899000	763
ENSMUSG00000038406	protein_coding	Scaf1	ENSMUST00000085383	protein_coding	principal1	7	-1	45016363	4293
ENSMUSG00000037440	protein_coding	Vnn1	ENSMUST00000219254	processed_transcript		10	1	23894854	717
ENSMUSG00000031157	protein_coding	Pqbp1	ENSMUST00000154552	protein_coding		X	-1	7898896	436
ENSMUSG00000037798	protein_coding	Mat1a	ENSMUST00000224514	protein_coding		14	1	41105151	747
ENSMUSG00000030500	protein_coding	Slc17a6	ENSMUST00000208597	processed_transcript		7	1	51629480	663
ENSMUSG00000113403	processed_pseudogene	Gm9315	ENSMUST00000222696	processed_pseudogene		12	-1	24383161	908
ENSMUSG00000046324	protein_coding	Ermp1	ENSMUST00000054083	nonsense_mediated_decay		19	-1	29648187	4714
ENSMUSG00000117974	transcribed_processed_pseudogene	Tuba-rs1	ENSMUST00000238030	transcribed_processed_pseudogene		17	1	30177475	1316
ENSMUSG00000117974	transcribed_processed_pseudogene	Tuba-rs1	ENSMUST00000236459	processed_transcript		17	1	30178240	680
ENSMUSG00000037798	protein_coding	Mat1a	ENSMUST00000047286	protein_coding	principal1	14	1	41105381	3208
ENSMUSG00000046324	protein_coding	Ermp1	ENSMUST00000162534	nonsense_mediated_decay		19	-1	29646027	2053
ENSMUSG00000057160	processed_pseudogene	Gm16372	ENSMUST00000073088	processed_pseudogene		12	-1	24493656	450
ENSMUSG00000103943	lincRNA	Gm37344	ENSMUST00000195490	lincRNA		Y	1	15270053	1498
ENSMUSG00000038406	protein_coding	Scaf1	ENSMUST00000210056	processed_transcript		7	-1	45016131	1409
ENSMUSG00000107049	TEC	Gm43771	ENSMUST00000202931	TEC		5	1	65963851	1578
ENSMUSG00000117947	TEC	Gm50226	ENSMUST00000237534	TEC		17	1	30165506	880
ENSMUSG00000046324	protein_coding	Ermp1	ENSMUST00000160125	retained_intron		19	-1	29613224	514
ENSMUSG00000038079	protein_coding	Tmem237	ENSMUST00000087475	protein_coding	alternative2	1	-1	59119806	1823
ENSMUSG00000038406	protein_coding	Scaf1	ENSMUST00000209989	retained_intron		7	-1	45013561	625
ENSMUSG00000038406	protein_coding	Scaf1	ENSMUST00000211680	protein_coding		7	-1	45015857	661
ENSMUSG00000029205	protein_coding	Chrna9	ENSMUST00000202957	protein_coding		5	1	65934921	401
ENSMUSG00000103943	lincRNA	Gm37344	ENSMUST00000192655	lincRNA		Y	1	15270506	437
ENSMUSG00000103943	lincRNA	Gm37344	ENSMUST00000192634	lincRNA		Y	1	15270506	621
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000186105	retained_intron		1	-1	30873695	1552
ENSMUSG00000038406	protein_coding	Scaf1	ENSMUST00000209521	processed_transcript		7	-1	45014936	231
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000191245	retained_intron		1	-1	30873921	2410
ENSMUSG00000102624	lincRNA	Gm37059	ENSMUST00000191723	lincRNA		Y	1	15444179	678
ENSMUSG00000046324	protein_coding	Ermp1	ENSMUST00000161124	processed_transcript		19	-1	29639563	704
ENSMUSG00000038079	protein_coding	Tmem237	ENSMUST00000186794	protein_coding	alternative2	1	-1	59120382	1533
ENSMUSG00000026062	protein_coding	Slc9a2	ENSMUST00000027231	protein_coding	principal1	1	1	40680574	5019
ENSMUSG00000084038	processed_pseudogene	Gm11295	ENSMUST00000121379	processed_pseudogene		13	1	22282354	803
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000191064	nonsense_mediated_decay		1	-1	30873804	1309
ENSMUSG00000038079	protein_coding	Tmem237	ENSMUST00000190014	protein_coding		1	-1	59120112	789
ENSMUSG00000102138	lincRNA	Gm31942	ENSMUST00000192534	lincRNA		Y	1	15490643	827
ENSMUSG00000046324	protein_coding	Ermp1	ENSMUST00000159243	retained_intron		19	-1	29648390	1950
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000188847	retained_intron		1	-1	30823843	2786
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000187600	processed_transcript		1	-1	30863070	188
ENSMUSG00000102138	lincRNA	Gm31942	ENSMUST00000195375	lincRNA		Y	1	15491098	437
ENSMUSG00000026062	protein_coding	Slc9a2	ENSMUST00000192345	protein_coding		1	1	40681597	2507
ENSMUSG00000038079	protein_coding	Tmem237	ENSMUST00000185951	retained_intron		1	-1	59114316	527
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000185521	retained_intron		1	-1	30830743	1313
ENSMUSG00000046324	protein_coding	Ermp1	ENSMUST00000160907	retained_intron		19	-1	29648378	1902
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000168410	protein_coding	principal3	17	-1	24205535	7683
ENSMUSG00000026062	protein_coding	Slc9a2	ENSMUST00000192294	retained_intron		1	1	40755756	856
ENSMUSG00000102582	lincRNA	Gm37440	ENSMUST00000195572	lincRNA		Y	-1	15572178	1227
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000188780	protein_coding		1	-1	30873894	941
ENSMUSG00000102582	lincRNA	Gm37440	ENSMUST00000192310	lincRNA		Y	-1	15572225	1152
ENSMUSG00000038079	protein_coding	Tmem237	ENSMUST00000186395	protein_coding		1	-1	59120408	554
ENSMUSG00000067242	protein_coding	Lgi1	ENSMUST00000198518	protein_coding	principal1	19	1	38264536	7780
ENSMUSG00000029205	protein_coding	Chrna9	ENSMUST00000201814	protein_coding		5	1	65934928	831
ENSMUSG00000118224	processed_pseudogene	Gm50352	ENSMUST00000237925	processed_pseudogene		18	-1	64685110	662
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000187968	protein_coding		1	-1	30873252	416
ENSMUSG00000118356	lincRNA	Gm50353	ENSMUST00000237969	lincRNA		18	-1	64700054	1531
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000073879	protein_coding		2	-1	31141802	8469
ENSMUSG00000103666	unprocessed_pseudogene	Gm38185	ENSMUST00000193195	unprocessed_pseudogene		Y	-1	15615801	694
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000185604	retained_intron		1	-1	30873475	824
ENSMUSG00000117766	TEC	Gm50354	ENSMUST00000235810	TEC		18	1	64700087	261
ENSMUSG00000029205	protein_coding	Chrna9	ENSMUST00000200881	retained_intron		5	1	65934948	600
ENSMUSG00000038079	protein_coding	Tmem237	ENSMUST00000186820	retained_intron		1	-1	59115958	459
ENSMUSG00000063305	protein_coding	Psg20	ENSMUST00000108482	protein_coding	principal5	7	-1	18686185	1871
ENSMUSG00000104207	unprocessed_pseudogene	Gm37395	ENSMUST00000194721	unprocessed_pseudogene		Y	-1	15695679	697
ENSMUSG00000116825	processed_pseudogene	Rps2-ps7	ENSMUST00000231787	processed_pseudogene		16	-1	18682216	880
ENSMUSG00000118045	lincRNA	Gm29860	ENSMUST00000237689	lincRNA		18	-1	64806496	639
ENSMUSG00000029205	protein_coding	Chrna9	ENSMUST00000202735	processed_transcript		5	1	65934973	318
ENSMUSG00000048874	protein_coding	Phf3	ENSMUST00000088310	protein_coding	principal1	1	-1	30863256	7561
ENSMUSG00000063305	protein_coding	Psg20	ENSMUST00000076677	protein_coding	alternative2	7	-1	18685992	1428
ENSMUSG00000060416	lincRNA	Gm839	ENSMUST00000079186	lincRNA		6	-1	89216237	1843
ENSMUSG00000103783	TEC	Gm37522	ENSMUST00000195437	TEC		1	-1	30836431	2884
ENSMUSG00000104283	antisense	Gm37459	ENSMUST00000192259	antisense		3	1	32939314	2840
ENSMUSG00000104315	TEC	Gm37906	ENSMUST00000192050	TEC		1	-1	30868538	3035
ENSMUSG00000069295	protein_coding	Vmn1r196	ENSMUST00000228382	protein_coding	principal2	13	1	22289920	6525
ENSMUSG00000041378	protein_coding	Cldn5	ENSMUST00000043577	protein_coding	principal1	16	1	18776847	1416
ENSMUSG00000104283	antisense	Gm37459	ENSMUST00000195007	antisense		3	1	32974676	563
ENSMUSG00000107732	lincRNA	Gm44204	ENSMUST00000204722	lincRNA		6	-1	89259136	737
ENSMUSG00000029205	protein_coding	Chrna9	ENSMUST00000202234	processed_transcript		5	1	65934975	501
ENSMUSG00000101622	unprocessed_pseudogene	Mrgpra18-ps	ENSMUST00000188059	unprocessed_pseudogene		7	-1	47872107	907
ENSMUSG00000069295	protein_coding	Vmn1r196	ENSMUST00000228557	protein_coding	principal2	13	1	22289920	5790
ENSMUSG00000069295	protein_coding	Vmn1r196	ENSMUST00000226245	protein_coding	alternative2	13	1	22289920	5312
ENSMUSG00000069295	protein_coding	Vmn1r196	ENSMUST00000227516	protein_coding		13	1	22289920	5122
ENSMUSG00000102392	lincRNA	Gm37577	ENSMUST00000191812	lincRNA		Y	1	15734796	564
ENSMUSG00000102392	lincRNA	Gm37577	ENSMUST00000191969	lincRNA		Y	1	15734796	381
ENSMUSG00000069295	protein_coding	Vmn1r196	ENSMUST00000091735	protein_coding	principal2	13	1	22293193	906
ENSMUSG00000101101	unprocessed_pseudogene	Gm18350	ENSMUST00000187395	unprocessed_pseudogene		7	-1	47887542	955
ENSMUSG00000102392	lincRNA	Gm37577	ENSMUST00000194712	lincRNA		Y	1	15734796	991
ENSMUSG00000107622	lincRNA	4930512J16Rik	ENSMUST00000203704	lincRNA		6	-1	89285725	1859
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000202214	protein_coding	principal3	5	1	31526997	2806
ENSMUSG00000109571	unprocessed_pseudogene	Gm44655	ENSMUST00000207768	unprocessed_pseudogene		7	-1	18691152	423
ENSMUSG00000095601	protein_coding	Rhox3a2	ENSMUST00000184565	protein_coding	principal1	X	1	37380028	823
ENSMUSG00000107622	lincRNA	4930512J16Rik	ENSMUST00000205184	lincRNA		6	-1	89273207	504
ENSMUSG00000101759	unprocessed_pseudogene	Gm5734	ENSMUST00000189787	unprocessed_pseudogene		7	-1	47916234	913
ENSMUSG00000067242	protein_coding	Lgi1	ENSMUST00000087252	nonsense_mediated_decay		19	1	38264567	4482
ENSMUSG00000107622	lincRNA	4930512J16Rik	ENSMUST00000204566	lincRNA		6	-1	89285694	421
ENSMUSG00000029205	protein_coding	Chrna9	ENSMUST00000031108	protein_coding	principal1	5	1	65967124	1843
ENSMUSG00000056379	protein_coding	Taar1	ENSMUST00000051532	protein_coding	principal1	10	1	23920356	1114
ENSMUSG00000095601	protein_coding	Rhox3a2	ENSMUST00000183543	protein_coding		X	1	37380517	658
ENSMUSG00000067242	protein_coding	Lgi1	ENSMUST00000199812	protein_coding		19	1	38264577	2262
ENSMUSG00000095601	protein_coding	Rhox3a2	ENSMUST00000183901	protein_coding		X	1	37380517	477
ENSMUSG00000101906	unprocessed_pseudogene	Mrgprc2-ps	ENSMUST00000188039	unprocessed_pseudogene		7	-1	47968194	1516
ENSMUSG00000029205	protein_coding	Chrna9	ENSMUST00000201664	processed_transcript		5	1	65975896	550
ENSMUSG00000106768	TEC	4930480C01Rik	ENSMUST00000200913	TEC		5	1	65951305	901
ENSMUSG00000054958	protein_coding	Nt5c1a	ENSMUST00000068262	protein_coding	principal1	4	1	123201504	1220
ENSMUSG00000082785	unprocessed_pseudogene	Vmn1r-ps100	ENSMUST00000120610	unprocessed_pseudogene		13	-1	22299478	867
ENSMUSG00000095601	protein_coding	Rhox3a2	ENSMUST00000096459	protein_coding	principal1	X	1	37380388	828
ENSMUSG00000108882	unprocessed_pseudogene	Gm44563	ENSMUST00000207958	unprocessed_pseudogene		7	1	18713590	178
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000218680	protein_coding	alternative2	10	1	69398996	5500
ENSMUSG00000067242	protein_coding	Lgi1	ENSMUST00000198045	protein_coding		19	1	38264646	1483
ENSMUSG00000109829	lincRNA	Gm45605	ENSMUST00000210265	lincRNA		11	1	61408018	4269
ENSMUSG00000067242	protein_coding	Lgi1	ENSMUST00000197123	nonsense_mediated_decay		19	1	38264660	574
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000217780	retained_intron		10	1	69400389	643
ENSMUSG00000117911	lincRNA	Gm35460	ENSMUST00000235282	lincRNA		19	1	44614740	1861
ENSMUSG00000067242	protein_coding	Lgi1	ENSMUST00000196090	protein_coding		19	1	38264671	1789
ENSMUSG00000117911	lincRNA	Gm35460	ENSMUST00000238014	lincRNA		19	1	44614762	1649
ENSMUSG00000067242	protein_coding	Lgi1	ENSMUST00000199665	retained_intron		19	1	38264762	676
ENSMUSG00000117911	lincRNA	Gm35460	ENSMUST00000236677	lincRNA		19	1	44614765	2003
ENSMUSG00000067242	protein_coding	Lgi1	ENSMUST00000134832	retained_intron		19	1	38264813	3766
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000038213	protein_coding	alternative1	10	-1	9900683	8825
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182379	processed_transcript		10	1	69533772	1185
ENSMUSG00000059763	protein_coding	Taar2	ENSMUST00000079134	protein_coding	principal1	10	1	23938572	1020
ENSMUSG00000044477	protein_coding	Zfand3	ENSMUST00000226208	protein_coding	principal1	17	1	30004733	3039
ENSMUSG00000082032	processed_pseudogene	Gm12271	ENSMUST00000121719	processed_pseudogene		11	-1	61416815	414
ENSMUSG00000067242	protein_coding	Lgi1	ENSMUST00000130039	retained_intron		19	1	38265410	723
ENSMUSG00000054013	protein_coding	Tmem179	ENSMUST00000066791	protein_coding	principal1	12	-1	112511172	2380
ENSMUSG00000118242	processed_pseudogene	Gm50141	ENSMUST00000237799	processed_pseudogene		19	1	38287951	274
ENSMUSG00000097683	lincRNA	Gm26644	ENSMUST00000237685	lincRNA		19	-1	44695460	2046
ENSMUSG00000097683	lincRNA	Gm26644	ENSMUST00000181365	lincRNA		19	-1	44695275	968
ENSMUSG00000054013	protein_coding	Tmem179	ENSMUST00000222836	protein_coding		12	-1	112516747	521
ENSMUSG00000114042	processed_pseudogene	Gm18473	ENSMUST00000220543	processed_pseudogene		13	1	54140935	868
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000141722	protein_coding	principal2	10	-1	9901079	4702
ENSMUSG00000117823	lincRNA	Gm35610	ENSMUST00000236936	lincRNA		19	1	44739879	2064
ENSMUSG00000117823	lincRNA	Gm35610	ENSMUST00000236025	lincRNA		19	1	44741353	1316
ENSMUSG00000020589	protein_coding	Fam49a	ENSMUST00000069066	protein_coding	principal1	12	1	12262139	9452
ENSMUSG00000079639	protein_coding	Rhox4a	ENSMUST00000115194	protein_coding	principal1	X	1	37265338	925
ENSMUSG00000020589	protein_coding	Fam49a	ENSMUST00000221782	processed_transcript		12	1	12262169	689
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000201858	protein_coding	alternative2	5	1	31527012	2109
ENSMUSG00000079639	protein_coding	Rhox4a	ENSMUST00000173298	retained_intron		X	1	37265479	1869
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000166247	protein_coding	principal1	6	-1	48841374	1414
ENSMUSG00000114282	TEC	5330431K02Rik	ENSMUST00000223710	TEC		13	-1	99504439	1963
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000052629	protein_coding	principal1	1	1	172482215	4133
ENSMUSG00000020589	protein_coding	Fam49a	ENSMUST00000069005	protein_coding	principal1	12	1	12262177	1771
ENSMUSG00000117815	lincRNA	Gm50166	ENSMUST00000237332	lincRNA		18	1	67066578	17803
ENSMUSG00000021335	protein_coding	Slc17a1	ENSMUST00000110413	protein_coding	principal1	13	1	23870265	1965
ENSMUSG00000083752	processed_pseudogene	Gm12014	ENSMUST00000120164	processed_pseudogene		11	1	17017852	1620
ENSMUSG00000044477	protein_coding	Zfand3	ENSMUST00000226421	processed_transcript		17	1	30005048	3489
ENSMUSG00000020589	protein_coding	Fam49a	ENSMUST00000223061	protein_coding	principal1	12	1	12262183	1782
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000164733	protein_coding	principal1	6	-1	48840980	1648
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000132141	retained_intron		1	1	172482220	608
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000202950	protein_coding	alternative2	5	1	31527012	2499
ENSMUSG00000021335	protein_coding	Slc17a1	ENSMUST00000129042	processed_transcript		13	1	23870295	503
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000128638	retained_intron		1	1	172482220	2029
ENSMUSG00000044477	protein_coding	Zfand3	ENSMUST00000226308	processed_transcript		17	1	30005051	2565
ENSMUSG00000020589	protein_coding	Fam49a	ENSMUST00000222357	retained_intron		12	1	12262189	3019
ENSMUSG00000079635	protein_coding	Rhox4c	ENSMUST00000115183	protein_coding	principal1	X	1	37480337	903
ENSMUSG00000030612	protein_coding	Mrpl46	ENSMUST00000032841	protein_coding	principal1	7	-1	78783089	1134
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000201460	retained_intron		5	1	31527601	659
ENSMUSG00000114487	protein_coding	Gm49393	ENSMUST00000225382	nonsense_mediated_decay	principal1	13	-1	60935590	546
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000201481	retained_intron		5	1	31531973	495
ENSMUSG00000079635	protein_coding	Rhox4c	ENSMUST00000173214	retained_intron		X	1	37480453	1851
ENSMUSG00000021335	protein_coding	Slc17a1	ENSMUST00000006785	protein_coding	principal1	13	1	23870296	2026
ENSMUSG00000050463	protein_coding	Krt78	ENSMUST00000164932	protein_coding	principal1	15	-1	101954287	3437
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000151435	processed_transcript		10	-1	9798037	2364
ENSMUSG00000030612	protein_coding	Mrpl46	ENSMUST00000133949	processed_transcript		7	-1	78783531	768
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000127482	nonsense_mediated_decay		1	1	172482231	3964
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000201925	protein_coding		5	1	31536136	712
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000136259	retained_intron		10	-1	9780328	3791
ENSMUSG00000044477	protein_coding	Zfand3	ENSMUST00000057897	protein_coding		17	1	30005064	2640
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000125200	protein_coding		10	-1	9900683	3300
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000202299	retained_intron		5	1	31543594	761
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000131828	retained_intron		10	-1	9770521	1518
ENSMUSG00000079638	protein_coding	Rhox2b	ENSMUST00000115191	protein_coding	principal1	X	1	37412067	799
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000148009	retained_intron		10	-1	9768948	287
ENSMUSG00000044477	protein_coding	Zfand3	ENSMUST00000234238	processed_transcript		17	1	30005154	474
ENSMUSG00000034987	protein_coding	Hrh2	ENSMUST00000038101	protein_coding	principal2	13	1	54192129	2789
ENSMUSG00000044477	protein_coding	Zfand3	ENSMUST00000234671	nonsense_mediated_decay		17	1	30005241	496
ENSMUSG00000044477	protein_coding	Zfand3	ENSMUST00000234866	processed_transcript		17	1	30007797	886
ENSMUSG00000034987	protein_coding	Hrh2	ENSMUST00000209846	protein_coding	alternative2	13	1	54214007	4074
ENSMUSG00000034987	protein_coding	Hrh2	ENSMUST00000211742	nonsense_mediated_decay		13	1	54214007	4219
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000202273	protein_coding		5	1	31543783	660
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000139199	retained_intron		10	-1	9778309	950
ENSMUSG00000044477	protein_coding	Zfand3	ENSMUST00000234790	processed_transcript		17	1	30060382	763
ENSMUSG00000044477	protein_coding	Zfand3	ENSMUST00000234902	processed_transcript		17	1	30136190	2289
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000201789	protein_coding		5	1	31543861	420
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000111235	protein_coding	principal1	1	1	172482314	4205
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000097376	protein_coding	alternative2	17	-1	24205562	7265
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000136324	protein_coding		10	-1	9798197	791
ENSMUSG00000044629	protein_coding	Cnrip1	ENSMUST00000058159	protein_coding	principal1	11	1	17051818	1654
ENSMUSG00000044477	protein_coding	Zfand3	ENSMUST00000234091	processed_transcript		17	1	30197576	360
ENSMUSG00000090016	antisense	Gm16578	ENSMUST00000160797	antisense		13	-1	54223023	784
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182194	retained_intron		10	1	69533772	6372
ENSMUSG00000052727	protein_coding	Map1b	ENSMUST00000064762	protein_coding	principal1	13	-1	99516540	11808
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000101429	protein_coding	principal1	6	-1	48841117	1238
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000202575	processed_transcript		5	1	31550566	459
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000128487	retained_intron		10	-1	9778309	637
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000139779	retained_intron		10	-1	9798168	440
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000141888	retained_intron		1	1	172491087	786
ENSMUSG00000019790	protein_coding	Stxbp5	ENSMUST00000219200	retained_intron		10	-1	9819585	3870
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000193620	protein_coding		1	1	172491964	636
ENSMUSG00000052727	protein_coding	Map1b	ENSMUST00000224702	processed_transcript		13	-1	99444467	2150
ENSMUSG00000029141	protein_coding	Slc4a1ap	ENSMUST00000114533	protein_coding	principal3	5	1	31526995	2424
ENSMUSG00000044629	protein_coding	Cnrip1	ENSMUST00000131515	protein_coding		11	1	17051586	850
ENSMUSG00000101704	unprocessed_pseudogene	Gm21878	ENSMUST00000191365	unprocessed_pseudogene		Y	1	37818062	696
ENSMUSG00000052727	protein_coding	Map1b	ENSMUST00000223693	processed_transcript		13	-1	99443944	1759
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000040474	protein_coding	principal3	17	-1	24205515	6269
ENSMUSG00000059626	protein_coding	Rhox3e	ENSMUST00000115198	protein_coding	principal1	X	1	37542019	1053
ENSMUSG00000044629	protein_coding	Cnrip1	ENSMUST00000135637	retained_intron		11	1	17051803	2153
ENSMUSG00000091269	processed_pseudogene	Gm6682	ENSMUST00000169666	processed_pseudogene		12	1	4782170	1346
ENSMUSG00000086962	protein_coding	Gm12248	ENSMUST00000218429	protein_coding	alternative2	11	-1	58093134	1462
ENSMUSG00000086962	protein_coding	Gm12248	ENSMUST00000219877	protein_coding	principal5	11	-1	58093134	1160
ENSMUSG00000101349	unprocessed_pseudogene	Gm28162	ENSMUST00000190545	unprocessed_pseudogene		Y	1	37854963	615
ENSMUSG00000052727	protein_coding	Map1b	ENSMUST00000223725	protein_coding		13	-1	99447620	2669
ENSMUSG00000086962	protein_coding	Gm12248	ENSMUST00000137124	protein_coding	alternative2	11	-1	58072916	933
ENSMUSG00000052727	protein_coding	Map1b	ENSMUST00000224605	processed_transcript		13	-1	99477081	366
ENSMUSG00000059626	protein_coding	Rhox3e	ENSMUST00000184210	protein_coding		X	1	37547104	477
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000201089	protein_coding	principal3	17	-1	24205519	4081
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000140816	retained_intron		1	1	172493934	921
ENSMUSG00000113327	lincRNA	Gm48615	ENSMUST00000221038	lincRNA		13	1	54245296	289
ENSMUSG00000052727	protein_coding	Map1b	ENSMUST00000223820	retained_intron		13	-1	99516518	1364
ENSMUSG00000059626	protein_coding	Rhox3e	ENSMUST00000184270	protein_coding		X	1	37547104	658
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000113560	protein_coding	principal1	2	-1	31142008	4726
ENSMUSG00000081223	processed_pseudogene	Gm12247	ENSMUST00000117585	processed_pseudogene		11	-1	58097773	670
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000155426	retained_intron		1	1	172493961	796
ENSMUSG00000105688	lincRNA	4930437M23Rik	ENSMUST00000197456	lincRNA		5	-1	11501452	968
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000148833	nonsense_mediated_decay		2	-1	132578178	3431
ENSMUSG00000024312	protein_coding	Wdr46	ENSMUST00000025170	protein_coding	principal1	17	1	33940660	2229
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000125258	retained_intron		1	1	172494754	926
ENSMUSG00000059626	protein_coding	Rhox3e	ENSMUST00000081327	protein_coding	principal1	X	1	37546975	648
ENSMUSG00000118546	unitary_pseudogene	CT025683.1	ENSMUST00000239170	unitary_pseudogene		12	1	4810494	751
ENSMUSG00000050345	protein_coding	4930486L24Rik	ENSMUST00000091569	protein_coding	principal1	13	-1	60864475	1432
ENSMUSG00000037995	protein_coding	Igsf9	ENSMUST00000150855	retained_intron		1	1	172497780	590
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000203355	protein_coding	principal1	6	-1	48841370	1202
ENSMUSG00000024312	protein_coding	Wdr46	ENSMUST00000173857	retained_intron		17	1	33940717	533
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000167791	protein_coding	alternative2	17	-1	24205514	4383
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000204073	protein_coding	principal1	6	-1	48841137	986
ENSMUSG00000117221	lincRNA	Gm17830	ENSMUST00000233582	lincRNA		17	-1	49312960	1829
ENSMUSG00000024312	protein_coding	Wdr46	ENSMUST00000234334	protein_coding		17	1	33940977	1396
ENSMUSG00000014104	protein_coding	Sval2	ENSMUST00000120605	protein_coding		6	1	41852989	497
ENSMUSG00000095296	protein_coding	Gm8906	ENSMUST00000164651	protein_coding	principal5	5	1	11502685	1099
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000113562	protein_coding		2	-1	31141996	4515
ENSMUSG00000095296	protein_coding	Gm8906	ENSMUST00000179375	protein_coding	alternative2	5	1	11503813	465
ENSMUSG00000117221	lincRNA	Gm17830	ENSMUST00000233890	lincRNA		17	-1	49312241	1546
ENSMUSG00000030611	protein_coding	Mrps11	ENSMUST00000032840	protein_coding	principal1	7	1	78783119	1056
ENSMUSG00000024312	protein_coding	Wdr46	ENSMUST00000172546	retained_intron		17	1	33941405	604
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000063303	protein_coding	principal3	11	1	52004221	2765
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000201805	protein_coding	alternative2	17	-1	24205531	3806
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000121591	protein_coding	alternative2	11	1	52004221	2387
ENSMUSG00000060803	protein_coding	Gstp1	ENSMUST00000169613	protein_coding	principal1	19	-1	4037985	821
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000204783	protein_coding		6	-1	48840455	614
ENSMUSG00000117198	processed_pseudogene	Gm18067	ENSMUST00000233953	processed_pseudogene		17	-1	49331496	887
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000205159	protein_coding		6	-1	48840761	657
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000203229	protein_coding		6	-1	48841078	766
ENSMUSG00000014104	protein_coding	Sval2	ENSMUST00000014248	protein_coding	principal1	6	1	41860239	585
ENSMUSG00000022969	protein_coding	Il10rb	ENSMUST00000156133	nonsense_mediated_decay		16	1	91406164	2791
ENSMUSG00000060803	protein_coding	Gstp1	ENSMUST00000236211	retained_intron		19	-1	4035993	423
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000205147	protein_coding		6	-1	48841496	742
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000203265	protein_coding		6	-1	48840748	733
ENSMUSG00000058620	protein_coding	Adra2b	ENSMUST00000104934	protein_coding	alternative2	2	1	127363208	4014
ENSMUSG00000014104	protein_coding	Sval2	ENSMUST00000119995	protein_coding		6	1	41861792	463
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000171189	protein_coding	principal3	17	-1	24199957	4592
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000203501	protein_coding		6	-1	48840595	867
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000113564	protein_coding		2	-1	31141957	3892
ENSMUSG00000030611	protein_coding	Mrps11	ENSMUST00000123706	retained_intron		7	1	78783313	924
ENSMUSG00000014104	protein_coding	Sval2	ENSMUST00000143093	retained_intron		6	1	41863340	647
ENSMUSG00000058620	protein_coding	Adra2b	ENSMUST00000071902	protein_coding	principal2	2	1	127363286	3936
ENSMUSG00000030611	protein_coding	Mrps11	ENSMUST00000133304	retained_intron		7	1	78783355	922
ENSMUSG00000029810	protein_coding	Tmem176b	ENSMUST00000203618	retained_intron		6	-1	48840455	561
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000202925	protein_coding	principal3	17	-1	24205496	4216
ENSMUSG00000071772	protein_coding	Rhox3a	ENSMUST00000115203	protein_coding	principal1	X	1	37249919	1053
ENSMUSG00000058546	protein_coding	Rpl23a	ENSMUST00000127270	retained_intron		11	-1	78183077	588
ENSMUSG00000060803	protein_coding	Gstp1	ENSMUST00000237893	protein_coding		19	-1	4037977	806
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000201301	protein_coding	alternative2	17	-1	24205523	4261
ENSMUSG00000023367	protein_coding	Tmem176a	ENSMUST00000204400	protein_coding		6	1	48840919	308
ENSMUSG00000044258	protein_coding	Ctla2a	ENSMUST00000021880	protein_coding	principal1	13	-1	60936625	1373
ENSMUSG00000058546	protein_coding	Rpl23a	ENSMUST00000144561	retained_intron		11	-1	78181630	503
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000201960	protein_coding	principal3	17	-1	24205514	4305
ENSMUSG00000060803	protein_coding	Gstp1	ENSMUST00000236311	processed_transcript		19	-1	4036382	460
ENSMUSG00000030611	protein_coding	Mrps11	ENSMUST00000133553	nonsense_mediated_decay		7	1	78783356	825
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000168378	protein_coding	principal3	17	-1	24199957	4350
ENSMUSG00000038456	protein_coding	Dennd2a	ENSMUST00000036877	protein_coding	principal1	6	-1	39557867	4468
ENSMUSG00000067370	protein_coding	B3galt4	ENSMUST00000087543	protein_coding	principal1	17	-1	33951488	1580
ENSMUSG00000060803	protein_coding	Gstp1	ENSMUST00000237982	protein_coding		19	-1	4037925	670
ENSMUSG00000054676	protein_coding	1600014C10Rik	ENSMUST00000178207	protein_coding		7	1	38183217	3341
ENSMUSG00000071772	protein_coding	Rhox3a	ENSMUST00000185028	protein_coding		X	1	37255007	653
ENSMUSG00000030611	protein_coding	Mrps11	ENSMUST00000136001	retained_intron		7	1	78783370	548
ENSMUSG00000054676	protein_coding	1600014C10Rik	ENSMUST00000178890	processed_transcript		7	1	38183240	465
ENSMUSG00000071772	protein_coding	Rhox3a	ENSMUST00000185050	protein_coding		X	1	37255007	474
ENSMUSG00000030611	protein_coding	Mrps11	ENSMUST00000132922	retained_intron		7	1	78783371	792
ENSMUSG00000060803	protein_coding	Gstp1	ENSMUST00000237239	retained_intron		19	-1	4037901	819
ENSMUSG00000015804	protein_coding	Med28	ENSMUST00000156481	protein_coding	principal1	5	1	45520229	4560
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000138581	processed_transcript		2	-1	31096500	2390
ENSMUSG00000054676	protein_coding	1600014C10Rik	ENSMUST00000179525	protein_coding		7	1	38183261	2326
ENSMUSG00000038456	protein_coding	Dennd2a	ENSMUST00000149162	retained_intron		6	-1	39489166	1702
ENSMUSG00000108536	TEC	Gm45059	ENSMUST00000205558	TEC		7	-1	78778366	1077
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000128500	protein_coding		2	-1	31105352	1481
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000201359	nonsense_mediated_decay		17	-1	24205525	4098
ENSMUSG00000038456	protein_coding	Dennd2a	ENSMUST00000145541	retained_intron		6	-1	39470324	737
ENSMUSG00000060803	protein_coding	Gstp1	ENSMUST00000237273	retained_intron		19	-1	4037896	532
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000100208	protein_coding		2	-1	31141802	1859
ENSMUSG00000015804	protein_coding	Med28	ENSMUST00000119579	protein_coding		5	1	45520295	636
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000202018	processed_transcript		17	-1	24181155	370
ENSMUSG00000038456	protein_coding	Dennd2a	ENSMUST00000202707	retained_intron		6	-1	39486456	1878
ENSMUSG00000034575	protein_coding	Tent4a	ENSMUST00000198607	protein_coding		13	-1	69534617	4750
ENSMUSG00000060803	protein_coding	Gstp1	ENSMUST00000235711	retained_intron		19	-1	4037877	709
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000201583	protein_coding		17	-1	24205482	893
ENSMUSG00000038456	protein_coding	Dennd2a	ENSMUST00000154149	protein_coding		6	-1	39557867	1787
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000109078	protein_coding	alternative2	11	1	52004225	2216
ENSMUSG00000060803	protein_coding	Gstp1	ENSMUST00000237773	retained_intron		19	-1	4037899	472
ENSMUSG00000036473	protein_coding	Tbc1d24	ENSMUST00000201716	processed_transcript		17	-1	24205519	434
ENSMUSG00000015804	protein_coding	Med28	ENSMUST00000118833	protein_coding		5	1	45520303	734
ENSMUSG00000054676	protein_coding	1600014C10Rik	ENSMUST00000178876	protein_coding		7	1	38183653	3283
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000100207	protein_coding		2	-1	31141802	1680
ENSMUSG00000034575	protein_coding	Tent4a	ENSMUST00000223344	protein_coding	principal1	13	-1	69532432	2118
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000113555	protein_coding		2	-1	31141802	1776
ENSMUSG00000034575	protein_coding	Tent4a	ENSMUST00000222497	retained_intron		13	-1	69534186	4867
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000075326	protein_coding		2	-1	31141802	1761
ENSMUSG00000054676	protein_coding	1600014C10Rik	ENSMUST00000177983	protein_coding		7	1	38183848	403
ENSMUSG00000095172	protein_coding	Gm20822	ENSMUST00000188422	protein_coding	principal1	Y	-1	15884771	1229
ENSMUSG00000095698	protein_coding	Rhox2d	ENSMUST00000115179	protein_coding	principal1	X	1	37493428	685
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000063321	protein_coding	alternative2	11	1	52004241	2008
ENSMUSG00000095172	protein_coding	Gm20822	ENSMUST00000165756	protein_coding	principal1	Y	-1	15883245	687
ENSMUSG00000054676	protein_coding	1600014C10Rik	ENSMUST00000179992	protein_coding		7	1	38183898	568
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000128431	protein_coding		2	-1	31055444	1064
ENSMUSG00000054676	protein_coding	1600014C10Rik	ENSMUST00000179503	protein_coding		7	1	38186271	784
ENSMUSG00000102754	unprocessed_pseudogene	Gm38183	ENSMUST00000193189	unprocessed_pseudogene		Y	-1	16039572	205
ENSMUSG00000015804	protein_coding	Med28	ENSMUST00000015948	processed_transcript		5	1	45521007	778
ENSMUSG00000034575	protein_coding	Tent4a	ENSMUST00000044081	protein_coding	principal1	13	-1	69533864	3994
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000135076	protein_coding		11	1	52004254	665
ENSMUSG00000103167	unprocessed_pseudogene	Gm38149	ENSMUST00000191943	unprocessed_pseudogene		Y	-1	16112032	339
ENSMUSG00000015804	protein_coding	Med28	ENSMUST00000139586	retained_intron		5	1	45522130	512
ENSMUSG00000113486	processed_pseudogene	Gm48676	ENSMUST00000221578	processed_pseudogene		13	1	69514000	177
ENSMUSG00000044258	protein_coding	Ctla2a	ENSMUST00000225385	processed_transcript		13	-1	60936571	819
ENSMUSG00000044258	protein_coding	Ctla2a	ENSMUST00000223750	processed_transcript		13	-1	60936571	748
ENSMUSG00000044258	protein_coding	Ctla2a	ENSMUST00000225762	retained_intron		13	-1	60936571	1002
ENSMUSG00000058546	protein_coding	Rpl23a	ENSMUST00000102483	protein_coding	principal1	11	-1	78183584	560
ENSMUSG00000022969	protein_coding	Il10rb	ENSMUST00000023691	protein_coding	principal1	16	1	91406235	1850
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000143228	nonsense_mediated_decay		11	1	52004265	2769
ENSMUSG00000079636	protein_coding	Rhox3c	ENSMUST00000115188	protein_coding	principal1	X	1	37458585	1053
ENSMUSG00000112941	lincRNA	Gm48623	ENSMUST00000221369	lincRNA		13	1	54301959	1004
ENSMUSG00000041912	protein_coding	Tdrkh	ENSMUST00000166032	protein_coding	principal2	3	1	94413273	5692
ENSMUSG00000054676	protein_coding	1600014C10Rik	ENSMUST00000067854	protein_coding	principal1	7	1	38183787	3143
ENSMUSG00000054676	protein_coding	1600014C10Rik	ENSMUST00000165308	protein_coding	principal1	7	1	38183217	3335
ENSMUSG00000064120	protein_coding	Mocs1	ENSMUST00000165390	protein_coding		17	1	49428362	729
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000120374	protein_coding	alternative2	11	1	52004290	2770
ENSMUSG00000079636	protein_coding	Rhox3c	ENSMUST00000123851	protein_coding		X	1	37469997	655
ENSMUSG00000112941	lincRNA	Gm48623	ENSMUST00000223430	lincRNA		13	1	54302558	442
ENSMUSG00000044258	protein_coding	Ctla2a	ENSMUST00000225498	retained_intron		13	-1	60935873	706
ENSMUSG00000022969	protein_coding	Il10rb	ENSMUST00000152729	retained_intron		16	1	91406320	1482
ENSMUSG00000022969	protein_coding	Il10rb	ENSMUST00000144215	nonsense_mediated_decay		16	1	91406320	697
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000113552	protein_coding		2	-1	31141939	1910
ENSMUSG00000113404	lincRNA	Gm48622	ENSMUST00000220818	lincRNA		13	-1	54327880	2746
ENSMUSG00000079636	protein_coding	Rhox3c	ENSMUST00000151387	protein_coding		X	1	37469997	477
ENSMUSG00000044258	protein_coding	Ctla2a	ENSMUST00000226023	processed_transcript		13	-1	60936557	708
ENSMUSG00000108332	antisense	D530033B14Rik	ENSMUST00000206282	antisense		7	-1	38182778	216
ENSMUSG00000041912	protein_coding	Tdrkh	ENSMUST00000197876	nonsense_mediated_decay		3	1	94413300	476
ENSMUSG00000022969	protein_coding	Il10rb	ENSMUST00000137612	processed_transcript		16	1	91406444	475
ENSMUSG00000117406	protein_coding	Ntn3	ENSMUST00000024931	protein_coding	principal1	17	-1	24209531	5038
ENSMUSG00000093701	protein_coding	Gm21970	ENSMUST00000161517	nonsense_mediated_decay		16	1	91391721	760
ENSMUSG00000079636	protein_coding	Rhox3c	ENSMUST00000115189	protein_coding	principal1	X	1	37469868	648
ENSMUSG00000093701	protein_coding	Gm21970	ENSMUST00000160764	protein_coding	principal1	16	1	91391721	884
ENSMUSG00000044258	protein_coding	Ctla2a	ENSMUST00000224054	nonsense_mediated_decay		13	-1	60936557	684
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000136181	protein_coding		2	-1	31141955	635
ENSMUSG00000108332	antisense	D530033B14Rik	ENSMUST00000205412	antisense		7	-1	38196457	546
ENSMUSG00000041912	protein_coding	Tdrkh	ENSMUST00000200486	protein_coding		3	1	94413317	1231
ENSMUSG00000109613	processed_pseudogene	Gm45405	ENSMUST00000211544	processed_pseudogene		8	-1	64911977	609
ENSMUSG00000044258	protein_coding	Ctla2a	ENSMUST00000225856	retained_intron		13	-1	60935604	657
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000149196	protein_coding		2	-1	31116312	651
ENSMUSG00000044258	protein_coding	Ctla2a	ENSMUST00000225966	retained_intron		13	-1	60936561	428
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000136085	processed_transcript		2	-1	31105450	350
ENSMUSG00000110157	lincRNA	Gm32507	ENSMUST00000209552	lincRNA		8	1	64937959	437
ENSMUSG00000074874	protein_coding	Ctla2b	ENSMUST00000225439	nonsense_mediated_decay		13	-1	60897053	1610
ENSMUSG00000021594	protein_coding	Srd5a1	ENSMUST00000091514	protein_coding	principal1	13	-1	69611442	2644
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000109076	protein_coding	alternative2	11	1	52004349	1610
ENSMUSG00000036587	protein_coding	Fut7	ENSMUST00000114278	protein_coding	principal3	2	1	25423553	1990
ENSMUSG00000041912	protein_coding	Tdrkh	ENSMUST00000196386	protein_coding		3	1	94413318	1050
ENSMUSG00000020817	protein_coding	Rabep1	ENSMUST00000076270	protein_coding	principal3	11	1	70844778	5408
ENSMUSG00000041912	protein_coding	Tdrkh	ENSMUST00000197901	protein_coding	principal2	3	1	94413318	2652
ENSMUSG00000074874	protein_coding	Ctla2b	ENSMUST00000225732	nonsense_mediated_decay		13	-1	60896286	617
ENSMUSG00000021594	protein_coding	Srd5a1	ENSMUST00000220731	processed_transcript		13	-1	69594829	742
ENSMUSG00000094945	protein_coding	Rhox4a2	ENSMUST00000179915	protein_coding	principal1	X	1	37390848	901
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000128853	nonsense_mediated_decay		11	1	52027073	1564
ENSMUSG00000028222	protein_coding	Calb1	ENSMUST00000029876	protein_coding	principal1	4	1	15881264	4222
ENSMUSG00000075415	protein_coding	Fnbp1	ENSMUST00000113559	protein_coding		2	-1	31096500	4378
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000147874	protein_coding		11	1	52027297	513
ENSMUSG00000036587	protein_coding	Fut7	ENSMUST00000134259	protein_coding		2	1	25423267	676
ENSMUSG00000021594	protein_coding	Srd5a1	ENSMUST00000059235	processed_transcript		13	-1	69611348	888
ENSMUSG00000036587	protein_coding	Fut7	ENSMUST00000142156	processed_transcript		2	1	25424648	337
ENSMUSG00000041912	protein_coding	Tdrkh	ENSMUST00000196606	protein_coding	alternative2	3	1	94422800	2586
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000150736	nonsense_mediated_decay		11	1	52032362	631
ENSMUSG00000041912	protein_coding	Tdrkh	ENSMUST00000197495	protein_coding		3	1	94422800	2476
ENSMUSG00000117406	protein_coding	Ntn3	ENSMUST00000234420	nonsense_mediated_decay		17	-1	24209404	4078
ENSMUSG00000110378	TEC	Gm45242	ENSMUST00000210666	TEC		8	-1	64947718	2129
ENSMUSG00000052151	protein_coding	Plpp2	ENSMUST00000163602	processed_transcript		10	-1	79533792	1609
ENSMUSG00000028222	protein_coding	Calb1	ENSMUST00000136266	retained_intron		4	1	15881266	701
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000154701	nonsense_mediated_decay		11	1	52032447	489
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182884	protein_coding	principal4	10	1	69533772	9963
ENSMUSG00000117406	protein_coding	Ntn3	ENSMUST00000234451	retained_intron		17	-1	24208412	1751
ENSMUSG00000051805	antisense	A530095I07Rik	ENSMUST00000070942	antisense		13	-1	69544023	847
ENSMUSG00000036587	protein_coding	Fut7	ENSMUST00000100320	protein_coding	alternative2	2	1	25423379	2076
ENSMUSG00000041912	protein_coding	Tdrkh	ENSMUST00000045245	protein_coding	principal2	3	1	94413318	2642
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000136021	protein_coding		11	1	52033527	467
ENSMUSG00000028222	protein_coding	Calb1	ENSMUST00000141336	retained_intron		4	1	15885457	736
ENSMUSG00000117406	protein_coding	Ntn3	ENSMUST00000234909	processed_transcript		17	-1	24209399	704
ENSMUSG00000020817	protein_coding	Rabep1	ENSMUST00000142220	retained_intron		11	1	70844782	4173
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182373	retained_intron		10	1	69533815	1776
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000207272	nonsense_mediated_decay		11	1	52033530	392
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000109081	protein_coding	alternative2	11	1	52004221	2063
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182155	protein_coding	alternative2	10	1	69533843	6375
ENSMUSG00000020817	protein_coding	Rabep1	ENSMUST00000179114	protein_coding		11	1	70844792	1264
ENSMUSG00000101710	unprocessed_pseudogene	Gm20922	ENSMUST00000186497	unprocessed_pseudogene		Y	1	37884636	696
ENSMUSG00000020817	protein_coding	Rabep1	ENSMUST00000100928	protein_coding		11	1	70844799	3860
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000109079	protein_coding	alternative2	11	1	52004221	2051
ENSMUSG00000036587	protein_coding	Fut7	ENSMUST00000041654	protein_coding	principal3	2	1	25423694	1970
ENSMUSG00000078517	protein_coding	Emc1	ENSMUST00000179784	protein_coding	alternative2	4	1	139352587	6232
ENSMUSG00000106156	processed_pseudogene	Gm21040	ENSMUST00000199493	processed_pseudogene		5	1	11512247	1132
ENSMUSG00000028140	protein_coding	Mrpl9	ENSMUST00000199009	retained_intron		3	1	94443318	716
ENSMUSG00000020817	protein_coding	Rabep1	ENSMUST00000177731	protein_coding		11	1	70844925	3167
ENSMUSG00000083412	processed_pseudogene	Gm12268	ENSMUST00000118398	processed_pseudogene		11	1	60446743	442
ENSMUSG00000020817	protein_coding	Rabep1	ENSMUST00000108533	protein_coding	alternative1	11	1	70844942	2791
ENSMUSG00000084249	processed_pseudogene	Gm12267	ENSMUST00000121609	processed_pseudogene		11	-1	60449970	761
ENSMUSG00000079633	protein_coding	Rhox4d	ENSMUST00000115175	protein_coding	principal1	X	1	37514359	936
ENSMUSG00000042073	protein_coding	Abhd14b	ENSMUST00000216130	protein_coding	principal1	9	1	106447459	1624
ENSMUSG00000078517	protein_coding	Emc1	ENSMUST00000144335	retained_intron		4	1	139352609	413
ENSMUSG00000023367	protein_coding	Tmem176a	ENSMUST00000101426	protein_coding	principal1	6	1	48841512	1540
ENSMUSG00000079633	protein_coding	Rhox4d	ENSMUST00000172476	retained_intron		X	1	37514507	1808
ENSMUSG00000020817	protein_coding	Rabep1	ENSMUST00000081362	protein_coding		11	1	70844975	2469
ENSMUSG00000020817	protein_coding	Rabep1	ENSMUST00000178245	protein_coding	alternative1	11	1	70844975	2460
ENSMUSG00000082297	unprocessed_pseudogene	Rhox3d-ps	ENSMUST00000119181	unprocessed_pseudogene		X	1	37503483	825
ENSMUSG00000042073	protein_coding	Abhd14b	ENSMUST00000215475	protein_coding		9	1	106447779	514
ENSMUSG00000094575	protein_coding	Gm20738	ENSMUST00000177666	protein_coding	principal1	Y	1	37957811	1225
ENSMUSG00000023367	protein_coding	Tmem176a	ENSMUST00000204482	nonsense_mediated_decay		6	1	48841522	1898
ENSMUSG00000078517	protein_coding	Emc1	ENSMUST00000042096	protein_coding	principal3	4	1	139352610	4706
ENSMUSG00000042073	protein_coding	Abhd14b	ENSMUST00000187106	protein_coding		9	1	106447788	599
ENSMUSG00000042073	protein_coding	Abhd14b	ENSMUST00000190167	protein_coding		9	1	106447792	586
ENSMUSG00000023367	protein_coding	Tmem176a	ENSMUST00000203461	retained_intron		6	1	48841548	2268
ENSMUSG00000104789	lincRNA	Gm43640	ENSMUST00000199000	lincRNA		5	-1	11593779	786
ENSMUSG00000042073	protein_coding	Abhd14b	ENSMUST00000186361	protein_coding		9	1	106448204	690
ENSMUSG00000074874	protein_coding	Ctla2b	ENSMUST00000021884	protein_coding	principal4	13	-1	60897447	842
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000109077	protein_coding	alternative2	11	1	52004221	2605
ENSMUSG00000100952	lincRNA	Gm28545	ENSMUST00000188667	lincRNA		Y	-1	38070280	1499
ENSMUSG00000020120	protein_coding	Plek	ENSMUST00000102881	protein_coding	principal1	11	-1	17008702	4101
ENSMUSG00000103995	TEC	5730488B01Rik	ENSMUST00000192889	TEC		4	1	44702800	2311
ENSMUSG00000023367	protein_coding	Tmem176a	ENSMUST00000168406	protein_coding	principal1	6	1	48841583	1086
ENSMUSG00000078517	protein_coding	Emc1	ENSMUST00000155700	nonsense_mediated_decay		4	1	139359247	3149
ENSMUSG00000042073	protein_coding	Abhd14b	ENSMUST00000185347	protein_coding	principal1	9	1	106448356	1200
ENSMUSG00000100952	lincRNA	Gm28545	ENSMUST00000191476	lincRNA		Y	-1	38069827	438
ENSMUSG00000020389	protein_coding	Cdkl3	ENSMUST00000109080	protein_coding	alternative2	11	1	52004221	2749
ENSMUSG00000021595	protein_coding	Nsun2	ENSMUST00000143716	protein_coding		13	1	69533746	485
ENSMUSG00000023367	protein_coding	Tmem176a	ENSMUST00000203639	protein_coding		6	1	48841770	743
ENSMUSG00000023367	protein_coding	Tmem176a	ENSMUST00000204309	protein_coding		6	1	48842589	355
ENSMUSG00000074874	protein_coding	Ctla2b	ENSMUST00000171347	protein_coding	alternative2	13	-1	60897405	1094
ENSMUSG00000084800	antisense	Gm12205	ENSMUST00000133940	antisense		11	-1	52039471	575
ENSMUSG00000078517	protein_coding	Emc1	ENSMUST00000082262	protein_coding	alternative2	4	1	139352593	6226
ENSMUSG00000021595	protein_coding	Nsun2	ENSMUST00000148115	processed_transcript		13	1	69533768	590
ENSMUSG00000020120	protein_coding	Plek	ENSMUST00000020321	protein_coding		11	-1	17052381	3896
ENSMUSG00000112531	processed_pseudogene	Gm2649	ENSMUST00000218825	processed_pseudogene		12	1	58920667	610
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000049461	protein_coding	principal1	8	-1	11550783	1902
ENSMUSG00000020120	protein_coding	Plek	ENSMUST00000156101	protein_coding		11	-1	17002999	353
ENSMUSG00000114432	protein_coding	Gm49391	ENSMUST00000225802	nonsense_mediated_decay		13	-1	60936497	1063
ENSMUSG00000114432	protein_coding	Gm49391	ENSMUST00000225859	protein_coding	alternative2	13	-1	60936571	1116
ENSMUSG00000114432	protein_coding	Gm49391	ENSMUST00000225167	protein_coding	principal5	13	-1	60936571	1105
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000211395	protein_coding		8	-1	11516189	424
ENSMUSG00000069294	protein_coding	Vmn1r197	ENSMUST00000226225	protein_coding	principal1	13	1	22324589	5326
ENSMUSG00000069294	protein_coding	Vmn1r197	ENSMUST00000227017	protein_coding	principal1	13	1	22324589	5158
ENSMUSG00000096788	protein_coding	Rhox2e	ENSMUST00000072167	protein_coding	principal1	X	1	37530452	799
ENSMUSG00000050711	protein_coding	Scg2	ENSMUST00000185234	protein_coding		1	-1	79440042	2317
ENSMUSG00000097324	lincRNA	Carmn	ENSMUST00000182244	lincRNA		18	-1	61665490	988
ENSMUSG00000042073	protein_coding	Abhd14b	ENSMUST00000048527	protein_coding	principal1	9	1	106448375	1745
ENSMUSG00000069294	protein_coding	Vmn1r197	ENSMUST00000091734	protein_coding	principal1	13	1	22327911	897
ENSMUSG00000091903	protein_coding	Gm6460	ENSMUST00000088616	protein_coding	alternative2	5	1	11594913	1168
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000211172	retained_intron		8	-1	11520386	2212
ENSMUSG00000097324	lincRNA	Carmn	ENSMUST00000181155	lincRNA		18	-1	61665537	1778
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000205276	protein_coding	principal2	7	-1	98656779	7693
ENSMUSG00000096788	protein_coding	Rhox2e	ENSMUST00000184746	protein_coding		X	1	37530474	735
ENSMUSG00000091903	protein_coding	Gm6460	ENSMUST00000163787	protein_coding	principal2	5	1	11594956	821
ENSMUSG00000069708	protein_coding	Taar3	ENSMUST00000045152	protein_coding	principal1	10	1	23949558	1032
ENSMUSG00000050711	protein_coding	Scg2	ENSMUST00000049972	protein_coding	principal1	1	-1	79440120	2515
ENSMUSG00000042073	protein_coding	Abhd14b	ENSMUST00000217496	protein_coding		9	1	106448653	631
ENSMUSG00000112649	transcribed_processed_pseudogene	Gm47647	ENSMUST00000220004	processed_transcript		12	-1	58924459	1266
ENSMUSG00000112649	transcribed_processed_pseudogene	Gm47647	ENSMUST00000218395	transcribed_processed_pseudogene		12	-1	58924294	661
ENSMUSG00000028140	protein_coding	Mrpl9	ENSMUST00000029786	protein_coding	principal2	3	1	94443325	1612
ENSMUSG00000020089	protein_coding	Ppa1	ENSMUST00000020286	protein_coding	principal1	10	1	61648552	1364
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000205911	protein_coding		7	-1	98656546	5079
ENSMUSG00000099730	lincRNA	Gm28547	ENSMUST00000186357	lincRNA		Y	1	38102223	2167
ENSMUSG00000114499	processed_pseudogene	Gm48489	ENSMUST00000225001	processed_pseudogene		13	1	22336315	189
ENSMUSG00000109004	processed_pseudogene	Gm44594	ENSMUST00000208982	processed_pseudogene		7	-1	108308300	407
ENSMUSG00000042073	protein_coding	Abhd14b	ENSMUST00000185527	protein_coding		9	1	106448714	628
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000038359	protein_coding	alternative2	7	-1	98656551	3564
ENSMUSG00000101873	unprocessed_pseudogene	Gm28546	ENSMUST00000188221	unprocessed_pseudogene		Y	1	38143521	615
ENSMUSG00000042073	protein_coding	Abhd14b	ENSMUST00000213179	protein_coding	principal1	9	1	106449784	1627
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000205331	retained_intron		7	-1	98594235	2965
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000210478	nonsense_mediated_decay		8	-1	11550741	2007
ENSMUSG00000028140	protein_coding	Mrpl9	ENSMUST00000196143	protein_coding	alternative2	3	1	94443337	1657
ENSMUSG00000064120	protein_coding	Mocs1	ENSMUST00000024797	protein_coding		17	1	49428364	2646
ENSMUSG00000104774	processed_pseudogene	Gm8920	ENSMUST00000196153	processed_pseudogene		5	1	11604671	924
ENSMUSG00000020089	protein_coding	Ppa1	ENSMUST00000160470	retained_intron		10	1	61648621	1432
ENSMUSG00000069707	protein_coding	Taar4	ENSMUST00000092660	protein_coding	principal1	10	1	23960494	1044
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000148168	retained_intron		11	-1	70969959	3000
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000205513	processed_transcript		7	-1	98595016	752
ENSMUSG00000020089	protein_coding	Ppa1	ENSMUST00000160607	processed_transcript		10	1	61662688	369
ENSMUSG00000100203	unprocessed_pseudogene	Gm21924	ENSMUST00000191308	unprocessed_pseudogene		Y	1	38173015	696
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000205886	protein_coding		7	-1	98612995	707
ENSMUSG00000020089	protein_coding	Ppa1	ENSMUST00000162028	retained_intron		10	1	61663689	354
ENSMUSG00000106032	sense_intronic	Gm42463	ENSMUST00000198041	sense_intronic		3	1	94413401	4886
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000206813	retained_intron		7	-1	98602333	2394
ENSMUSG00000099460	unprocessed_pseudogene	Gm21735	ENSMUST00000190360	unprocessed_pseudogene		Y	1	38247748	696
ENSMUSG00000104756	transcribed_processed_pseudogene	Gm42464	ENSMUST00000198111	processed_transcript		3	-1	94422434	774
ENSMUSG00000069706	protein_coding	Taar5	ENSMUST00000092659	protein_coding	principal1	10	1	23970706	1014
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000206626	protein_coding		7	-1	98615538	740
ENSMUSG00000105299	lincRNA	Gm33847	ENSMUST00000199294	lincRNA		5	-1	11680823	786
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000205485	retained_intron		7	-1	98602776	525
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000171702	protein_coding	principal1	15	-1	99651643	3052
ENSMUSG00000104756	transcribed_processed_pseudogene	Gm42464	ENSMUST00000196717	transcribed_processed_pseudogene		3	-1	94422268	417
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000206619	protein_coding		7	-1	98656595	2368
ENSMUSG00000045111	protein_coding	Taar6	ENSMUST00000057080	protein_coding	principal1	10	-1	23985646	1038
ENSMUSG00000028141	protein_coding	Oaz3	ENSMUST00000199318	retained_intron		3	-1	94434668	2255
ENSMUSG00000042709	protein_coding	Atpaf2	ENSMUST00000108721	protein_coding	alternative2	11	-1	60417051	1813
ENSMUSG00000022805	protein_coding	Maats1	ENSMUST00000023501	protein_coding	principal2	16	-1	38342143	3048
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000206611	protein_coding		7	-1	98656564	1080
ENSMUSG00000079637	protein_coding	Rhox2c	ENSMUST00000184688	protein_coding		X	1	37453680	720
ENSMUSG00000025521	protein_coding	Tmem192	ENSMUST00000026595	protein_coding	principal1	8	1	64947185	1122
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000206256	protein_coding		7	-1	98645196	600
ENSMUSG00000022805	protein_coding	Maats1	ENSMUST00000114740	protein_coding	alternative2	16	-1	38341812	2529
ENSMUSG00000042709	protein_coding	Atpaf2	ENSMUST00000145532	nonsense_mediated_decay		11	-1	60417018	949
ENSMUSG00000087568	antisense	Maats1os	ENSMUST00000133496	antisense		16	1	38302616	326
ENSMUSG00000079637	protein_coding	Rhox2c	ENSMUST00000115190	protein_coding	principal1	X	1	37453680	762
ENSMUSG00000035401	protein_coding	Emsy	ENSMUST00000206565	retained_intron		7	-1	98656783	5267
ENSMUSG00000064120	protein_coding	Mocs1	ENSMUST00000173033	protein_coding	principal1	17	1	49428410	2588
ENSMUSG00000068794	protein_coding	Col28a1	ENSMUST00000115537	protein_coding	principal1	6	-1	8192617	4230
ENSMUSG00000028141	protein_coding	Oaz3	ENSMUST00000204980	protein_coding		3	-1	94435117	401
ENSMUSG00000025521	protein_coding	Tmem192	ENSMUST00000209852	protein_coding		8	1	64947219	1193
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000023756	protein_coding	principal1	15	-1	99651656	2933
ENSMUSG00000079637	protein_coding	Rhox2c	ENSMUST00000173574	protein_coding		X	1	37454055	657
ENSMUSG00000046338	protein_coding	Gpat2	ENSMUST00000062211	protein_coding	principal1	2	1	127425199	2628
ENSMUSG00000025521	protein_coding	Tmem192	ENSMUST00000209923	nonsense_mediated_decay		8	1	64947232	881
ENSMUSG00000079637	protein_coding	Rhox2c	ENSMUST00000183655	protein_coding		X	1	37454067	489
ENSMUSG00000052151	protein_coding	Plpp2	ENSMUST00000063879	protein_coding	principal3	10	-1	79533796	1654
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000183169	protein_coding	alternative2	10	1	69533847	6870
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000183148	protein_coding	alternative2	10	1	69533847	7404
ENSMUSG00000062705	protein_coding	Tpbpb	ENSMUST00000080766	protein_coding	principal2	13	-1	60904880	850
ENSMUSG00000117895	antisense	Gm50368	ENSMUST00000237218	antisense		18	-1	65001175	1343
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182557	protein_coding		10	1	69534065	1569
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182439	protein_coding		10	1	69534208	2586
ENSMUSG00000052151	protein_coding	Plpp2	ENSMUST00000166804	protein_coding	alternative2	10	-1	79533760	1566
ENSMUSG00000025521	protein_coding	Tmem192	ENSMUST00000079896	protein_coding		8	1	64947254	916
ENSMUSG00000062705	protein_coding	Tpbpb	ENSMUST00000223978	protein_coding	alternative2	13	-1	60904832	991
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182142	retained_intron		10	1	69706296	4181
ENSMUSG00000064120	protein_coding	Mocs1	ENSMUST00000173362	nonsense_mediated_decay		17	1	49428442	1936
ENSMUSG00000037361	protein_coding	Sf3b6	ENSMUST00000046207	protein_coding	principal1	12	1	4817544	1180
ENSMUSG00000062705	protein_coding	Tpbpb	ENSMUST00000223698	protein_coding	principal2	13	-1	60904815	746
ENSMUSG00000042709	protein_coding	Atpaf2	ENSMUST00000138696	processed_transcript		11	-1	60417042	719
ENSMUSG00000019437	protein_coding	Tlcd1	ENSMUST00000098545	protein_coding		11	1	78176711	2897
ENSMUSG00000029413	protein_coding	Naaa	ENSMUST00000113102	protein_coding	principal3	5	-1	92278170	2414
ENSMUSG00000025521	protein_coding	Tmem192	ENSMUST00000211405	nonsense_mediated_decay		8	1	64959543	455
ENSMUSG00000042709	protein_coding	Atpaf2	ENSMUST00000154387	processed_transcript		11	-1	60417035	423
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182992	protein_coding		10	1	69706370	8309
ENSMUSG00000052151	protein_coding	Plpp2	ENSMUST00000218241	protein_coding	alternative2	10	-1	79533757	825
ENSMUSG00000064120	protein_coding	Mocs1	ENSMUST00000174647	nonsense_mediated_decay		17	1	49428442	1736
ENSMUSG00000114635	protein_coding	Gm49392	ENSMUST00000225690	nonsense_mediated_decay	principal1	13	-1	60896894	1659
ENSMUSG00000042709	protein_coding	Atpaf2	ENSMUST00000141987	processed_transcript		11	-1	60418457	405
ENSMUSG00000019437	protein_coding	Tlcd1	ENSMUST00000147819	protein_coding		11	1	78178130	457
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000165745	retained_intron		15	-1	99632804	962
ENSMUSG00000037361	protein_coding	Sf3b6	ENSMUST00000219359	retained_intron		12	1	4817561	1774
ENSMUSG00000042709	protein_coding	Atpaf2	ENSMUST00000156966	retained_intron		11	-1	60417036	522
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000209218	processed_transcript		8	-1	11550744	1375
ENSMUSG00000070858	protein_coding	Gm1673	ENSMUST00000094869	protein_coding	principal3	5	1	33983433	477
ENSMUSG00000037361	protein_coding	Sf3b6	ENSMUST00000218705	processed_transcript		12	1	4817575	460
ENSMUSG00000064120	protein_coding	Mocs1	ENSMUST00000174268	processed_transcript		17	1	49433196	421
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000211406	processed_transcript		8	-1	11550766	1352
ENSMUSG00000037361	protein_coding	Sf3b6	ENSMUST00000219128	protein_coding		12	1	4820594	334
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000169700	processed_transcript		15	-1	99651589	433
ENSMUSG00000064120	protein_coding	Mocs1	ENSMUST00000173430	protein_coding		17	1	49452284	447
ENSMUSG00000052151	protein_coding	Plpp2	ENSMUST00000165233	nonsense_mediated_decay		10	-1	79533772	659
ENSMUSG00000019437	protein_coding	Tlcd1	ENSMUST00000145507	processed_transcript		11	1	78178149	462
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000210599	nonsense_mediated_decay		8	-1	11550692	1107
ENSMUSG00000037361	protein_coding	Sf3b6	ENSMUST00000218650	retained_intron		12	1	4826695	455
ENSMUSG00000029413	protein_coding	Naaa	ENSMUST00000159732	retained_intron		5	-1	92262782	1632
ENSMUSG00000071771	protein_coding	Rhox4b	ENSMUST00000096458	protein_coding	principal1	X	1	37432494	887
ENSMUSG00000042709	protein_coding	Atpaf2	ENSMUST00000239016	protein_coding	principal2	11	-1	60417099	1849
ENSMUSG00000092268	processed_transcript	Gm20540	ENSMUST00000172972	processed_transcript		17	-1	49429240	799
ENSMUSG00000054598	protein_coding	9130230L23Rik	ENSMUST00000201562	retained_intron		5	-1	65990007	3580
ENSMUSG00000068794	protein_coding	Col28a1	ENSMUST00000134731	processed_transcript		6	-1	8022766	214
ENSMUSG00000068680	antisense	Gm10248	ENSMUST00000090409	antisense		14	-1	23094571	2731
ENSMUSG00000068794	protein_coding	Col28a1	ENSMUST00000123163	retained_intron		6	-1	8079748	708
ENSMUSG00000101814	processed_pseudogene	Gm17807	ENSMUST00000186869	processed_pseudogene		12	1	116597253	298
ENSMUSG00000071771	protein_coding	Rhox4b	ENSMUST00000122828	retained_intron		X	1	37432593	1831
ENSMUSG00000099807	lincRNA	Gm28771	ENSMUST00000189399	lincRNA		Y	-1	38343323	1499
ENSMUSG00000068794	protein_coding	Col28a1	ENSMUST00000213284	protein_coding		6	-1	8180174	749
ENSMUSG00000059827	processed_pseudogene	Gm5670	ENSMUST00000093546	processed_pseudogene		14	-1	22558453	372
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000209236	retained_intron		8	-1	11550391	821
ENSMUSG00000006920	protein_coding	Ezh1	ENSMUST00000107284	protein_coding	alternative1	11	-1	101226463	4207
ENSMUSG00000019437	protein_coding	Tlcd1	ENSMUST00000092880	protein_coding	alternative2	11	1	78178651	2700
ENSMUSG00000044903	protein_coding	Psg22	ENSMUST00000208221	protein_coding	principal2	7	1	18718090	1871
ENSMUSG00000099807	lincRNA	Gm28771	ENSMUST00000185747	lincRNA		Y	-1	38342870	437
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000209676	nonsense_mediated_decay		8	-1	11550695	704
ENSMUSG00000102387	unprocessed_pseudogene	Gm38145	ENSMUST00000192319	unprocessed_pseudogene		Y	1	16151241	693
ENSMUSG00000006920	protein_coding	Ezh1	ENSMUST00000134622	processed_transcript		11	-1	101194422	726
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000170369	retained_intron		15	-1	99651582	4475
ENSMUSG00000102208	unprocessed_pseudogene	Gm32033	ENSMUST00000193483	unprocessed_pseudogene		Y	1	16367090	339
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000211161	processed_transcript		8	-1	11550536	354
ENSMUSG00000116648	processed_pseudogene	Rpl31-ps12	ENSMUST00000231756	processed_pseudogene		16	-1	16820123	375
ENSMUSG00000114412	antisense	4930405A10Rik	ENSMUST00000225327	antisense		14	-1	22542798	976
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000168065	nonsense_mediated_decay		15	-1	99639817	1031
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000210845	processed_transcript		8	-1	11550744	826
ENSMUSG00000044903	protein_coding	Psg22	ENSMUST00000108481	protein_coding	alternative2	7	1	18718090	1871
ENSMUSG00000056228	protein_coding	Cars2	ENSMUST00000211734	retained_intron		8	-1	11550741	3135
ENSMUSG00000056553	protein_coding	Ptprn2	ENSMUST00000185505	processed_transcript		12	1	116485720	980
ENSMUSG00000114412	antisense	4930405A10Rik	ENSMUST00000225587	antisense		14	-1	22542823	938
ENSMUSG00000102265	unprocessed_pseudogene	Gm32447	ENSMUST00000194265	unprocessed_pseudogene		Y	-1	16449989	697
ENSMUSG00000029413	protein_coding	Naaa	ENSMUST00000159345	protein_coding	alternative2	5	-1	92278165	1629
ENSMUSG00000070858	protein_coding	Gm1673	ENSMUST00000206020	retained_intron		5	1	33983437	661
ENSMUSG00000044903	protein_coding	Psg22	ENSMUST00000051973	protein_coding	principal2	7	1	18718090	1869
ENSMUSG00000114967	processed_pseudogene	Gm7473	ENSMUST00000224513	processed_pseudogene		14	-1	22775244	227
ENSMUSG00000104490	unprocessed_pseudogene	Gm20770	ENSMUST00000193474	unprocessed_pseudogene		Y	-1	16486602	694
ENSMUSG00000054598	protein_coding	9130230L23Rik	ENSMUST00000201351	protein_coding	principal1	5	-1	66004285	1454
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000171017	retained_intron		15	-1	99638268	1220
ENSMUSG00000006920	protein_coding	Ezh1	ENSMUST00000138835	processed_transcript		11	-1	101203305	662
ENSMUSG00000103112	unprocessed_pseudogene	Gm38016	ENSMUST00000194806	unprocessed_pseudogene		Y	-1	16614828	693
ENSMUSG00000029413	protein_coding	Naaa	ENSMUST00000175656	protein_coding		5	-1	92272548	652
ENSMUSG00000054598	protein_coding	9130230L23Rik	ENSMUST00000202278	retained_intron		5	-1	65991112	2023
ENSMUSG00000095647	protein_coding	Taar7a	ENSMUST00000078532	protein_coding	principal1	10	-1	23993481	1077
ENSMUSG00000114496	sense_intronic	Gm47601	ENSMUST00000225436	sense_intronic		14	1	22927926	2174
ENSMUSG00000103234	TEC	Gm37158	ENSMUST00000191652	TEC		Y	-1	16697033	5704
ENSMUSG00000094105	protein_coding	Gm8922	ENSMUST00000170057	protein_coding	principal1	5	1	11681959	1167
ENSMUSG00000056553	protein_coding	Ptprn2	ENSMUST00000189009	processed_transcript		12	1	116485729	2873
ENSMUSG00000029413	protein_coding	Naaa	ENSMUST00000161212	retained_intron		5	-1	92278165	1519
ENSMUSG00000094105	protein_coding	Gm8922	ENSMUST00000178989	protein_coding		5	1	11683236	465
ENSMUSG00000028141	protein_coding	Oaz3	ENSMUST00000204913	protein_coding		3	-1	94436567	689
ENSMUSG00000113485	TEC	Gm48000	ENSMUST00000223190	TEC		13	1	73273230	503
ENSMUSG00000054598	protein_coding	9130230L23Rik	ENSMUST00000202773	retained_intron		5	-1	66001333	774
ENSMUSG00000006920	protein_coding	Ezh1	ENSMUST00000100417	protein_coding		11	-1	101226426	3636
ENSMUSG00000095171	protein_coding	Taar7b	ENSMUST00000092658	protein_coding	principal1	10	1	23999939	1077
ENSMUSG00000102288	unprocessed_pseudogene	Gm36998	ENSMUST00000193205	unprocessed_pseudogene		Y	-1	16731850	704
ENSMUSG00000082063	processed_pseudogene	Gm12993	ENSMUST00000119900	processed_pseudogene		4	-1	116875465	479
ENSMUSG00000054598	protein_coding	9130230L23Rik	ENSMUST00000201386	retained_intron		5	-1	66004285	1270
ENSMUSG00000097816	antisense	Gm26811	ENSMUST00000181258	antisense		6	1	89304630	5485
ENSMUSG00000103417	unprocessed_pseudogene	Gm33112	ENSMUST00000193971	unprocessed_pseudogene		Y	-1	16888179	699
ENSMUSG00000054598	protein_coding	9130230L23Rik	ENSMUST00000201302	retained_intron		5	-1	66001791	729
ENSMUSG00000019437	protein_coding	Tlcd1	ENSMUST00000127587	protein_coding	principal3	11	1	78178685	1412
ENSMUSG00000006920	protein_coding	Ezh1	ENSMUST00000146884	processed_transcript		11	-1	101200943	895
ENSMUSG00000054598	protein_coding	9130230L23Rik	ENSMUST00000165250	protein_coding	principal1	5	-1	66000218	492
ENSMUSG00000084182	unprocessed_pseudogene	Taar7c-ps	ENSMUST00000122123	unprocessed_pseudogene		10	1	24013470	1055
ENSMUSG00000066407	processed_pseudogene	Gm10263	ENSMUST00000085163	processed_pseudogene		13	1	73317844	300
ENSMUSG00000006920	protein_coding	Ezh1	ENSMUST00000128974	processed_transcript		11	-1	101210578	819
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000169810	protein_coding		15	-1	99651652	834
ENSMUSG00000070858	protein_coding	Gm1673	ENSMUST00000114383	protein_coding	alternative2	5	1	33983470	511
ENSMUSG00000019437	protein_coding	Tlcd1	ENSMUST00000141578	retained_intron		11	1	78178731	564
ENSMUSG00000094829	lincRNA	Gm21809	ENSMUST00000194072	lincRNA		Y	1	16923785	174
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000168976	retained_intron		15	-1	99634774	653
ENSMUSG00000094829	lincRNA	Gm21809	ENSMUST00000178495	lincRNA		Y	1	16923791	468
ENSMUSG00000006920	protein_coding	Ezh1	ENSMUST00000154211	processed_transcript		11	-1	101209405	658
ENSMUSG00000070858	protein_coding	Gm1673	ENSMUST00000142510	nonsense_mediated_decay		5	1	33983510	434
ENSMUSG00000104510	unprocessed_pseudogene	Gm34015	ENSMUST00000194908	unprocessed_pseudogene		Y	1	17002626	451
ENSMUSG00000019437	protein_coding	Tlcd1	ENSMUST00000108338	protein_coding		11	1	78178762	714
ENSMUSG00000051827	protein_coding	Rhox2a	ENSMUST00000063340	protein_coding	principal1	X	1	37244976	795
ENSMUSG00000006920	protein_coding	Ezh1	ENSMUST00000151291	processed_transcript		11	-1	101226442	373
ENSMUSG00000019437	protein_coding	Tlcd1	ENSMUST00000140379	retained_intron		11	1	78179273	408
ENSMUSG00000070858	protein_coding	Gm1673	ENSMUST00000114382	protein_coding	alternative2	5	1	33983534	451
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000165730	nonsense_mediated_decay		15	-1	99651569	550
ENSMUSG00000095125	protein_coding	Vmn1r198	ENSMUST00000226909	protein_coding	principal2	13	1	22350364	6259
ENSMUSG00000095520	protein_coding	Gm20877	ENSMUST00000191358	protein_coding	principal1	Y	1	17093873	1222
ENSMUSG00000051827	protein_coding	Rhox2a	ENSMUST00000173650	protein_coding		X	1	37244998	735
ENSMUSG00000047714	protein_coding	Ppp1r2	ENSMUST00000060188	protein_coding	principal1	16	-1	31275277	4078
ENSMUSG00000095520	protein_coding	Gm20877	ENSMUST00000100105	protein_coding	principal1	Y	1	17093879	1212
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000164983	nonsense_mediated_decay		15	-1	99651612	702
ENSMUSG00000095125	protein_coding	Vmn1r198	ENSMUST00000227167	protein_coding	alternative2	13	1	22350364	5990
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000168834	retained_intron		15	-1	99651582	687
ENSMUSG00000092369	antisense	1700039E22Rik	ENSMUST00000174082	antisense		19	-1	44835938	770
ENSMUSG00000095125	protein_coding	Vmn1r198	ENSMUST00000226786	protein_coding	principal2	13	1	22350364	6195
ENSMUSG00000084056	transcribed_unprocessed_pseudogene	Rhox3b-ps	ENSMUST00000121045	transcribed_unprocessed_pseudogene		X	1	37417012	868
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182474	retained_intron		10	1	69706474	5645
ENSMUSG00000095125	protein_coding	Vmn1r198	ENSMUST00000091733	protein_coding	principal2	13	1	22354346	903
ENSMUSG00000047714	protein_coding	Ppp1r2	ENSMUST00000115233	protein_coding		16	-1	31274992	958
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182162	retained_intron		10	1	69706478	1275
ENSMUSG00000109292	unprocessed_pseudogene	Gm44564	ENSMUST00000207985	unprocessed_pseudogene		7	1	18737447	180
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000171908	protein_coding		15	-1	99651612	605
ENSMUSG00000023015	protein_coding	Racgap1	ENSMUST00000109581	protein_coding		15	-1	99651643	374
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182492	retained_intron		10	1	69785514	1655
ENSMUSG00000108835	unprocessed_pseudogene	Gm44566	ENSMUST00000207638	unprocessed_pseudogene		7	1	18740548	304
ENSMUSG00000086167	processed_pseudogene	Gm13827	ENSMUST00000148801	processed_pseudogene		5	-1	115053840	372
ENSMUSG00000114666	unprocessed_pseudogene	Vmn1r-ps101	ENSMUST00000224526	unprocessed_pseudogene		13	1	22370561	265
ENSMUSG00000022783	protein_coding	Spag6l	ENSMUST00000023468	protein_coding	principal1	16	-1	16829313	2416
ENSMUSG00000028141	protein_coding	Oaz3	ENSMUST00000199678	protein_coding	principal5	3	-1	94436637	935
ENSMUSG00000006920	protein_coding	Ezh1	ENSMUST00000107285	protein_coding	principal2	11	-1	101226450	4193
ENSMUSG00000078154	protein_coding	Gm12184	ENSMUST00000104959	protein_coding	principal1	11	-1	48826655	1310
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182993	protein_coding		10	1	69785525	1233
ENSMUSG00000085818	antisense	Gm13267	ENSMUST00000142787	antisense		2	1	5895510	698
ENSMUSG00000071770	protein_coding	Rhox4e	ENSMUST00000089075	protein_coding	principal1	X	1	37557412	978
ENSMUSG00000028141	protein_coding	Oaz3	ENSMUST00000203883	protein_coding	alternative2	3	-1	94443833	881
ENSMUSG00000022783	protein_coding	Spag6l	ENSMUST00000132033	processed_transcript		16	-1	16829456	887
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000183240	protein_coding		10	1	69787456	876
ENSMUSG00000085818	antisense	Gm13267	ENSMUST00000150099	antisense		2	1	5895600	281
ENSMUSG00000028141	protein_coding	Oaz3	ENSMUST00000204548	protein_coding		3	-1	94443915	787
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182972	protein_coding		10	1	69898131	3656
ENSMUSG00000109023	unprocessed_pseudogene	Gm44565	ENSMUST00000208194	unprocessed_pseudogene		7	1	18742327	269
ENSMUSG00000058463	processed_pseudogene	Gm5471	ENSMUST00000072732	processed_pseudogene		15	-1	44972133	337
ENSMUSG00000028141	protein_coding	Oaz3	ENSMUST00000196799	retained_intron		3	-1	94436763	1648
ENSMUSG00000071770	protein_coding	Rhox4e	ENSMUST00000184330	retained_intron		X	1	37557602	1825
ENSMUSG00000086245	antisense	Gm16170	ENSMUST00000156882	antisense		11	-1	48853493	3754
ENSMUSG00000082437	unprocessed_pseudogene	Gm15136	ENSMUST00000120552	unprocessed_pseudogene		10	1	24021229	533
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182683	protein_coding		10	1	69899069	1007
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182239	retained_intron		10	1	69914865	515
ENSMUSG00000022783	protein_coding	Spag6l	ENSMUST00000154624	retained_intron		16	-1	16829320	2083
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182367	retained_intron		10	1	69925495	844
ENSMUSG00000028141	protein_coding	Oaz3	ENSMUST00000191506	protein_coding	alternative2	3	-1	94436616	1132
ENSMUSG00000063458	protein_coding	Lrmda	ENSMUST00000075639	protein_coding	principal1	14	1	22019712	908
ENSMUSG00000051392	protein_coding	Olfr1402	ENSMUST00000199297	protein_coding	principal1	3	-1	97422020	4051
ENSMUSG00000018415	protein_coding	Gid4	ENSMUST00000139477	nonsense_mediated_decay		11	1	60417145	1717
ENSMUSG00000081680	processed_pseudogene	Gm14473	ENSMUST00000122269	processed_pseudogene		X	-1	10865633	557
ENSMUSG00000042210	protein_coding	Abhd14a	ENSMUST00000171678	protein_coding	principal1	9	-1	106447563	1262
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182692	protein_coding		10	1	69925495	3833
ENSMUSG00000083419	processed_pseudogene	Gm14485	ENSMUST00000119489	processed_pseudogene		X	-1	11021007	493
ENSMUSG00000063458	protein_coding	Lrmda	ENSMUST00000161249	protein_coding		14	1	22019821	394
ENSMUSG00000022783	protein_coding	Spag6l	ENSMUST00000125017	processed_transcript		16	-1	16829313	500
ENSMUSG00000051392	protein_coding	Olfr1402	ENSMUST00000060912	protein_coding	principal1	3	-1	97411179	963
ENSMUSG00000022783	protein_coding	Spag6l	ENSMUST00000147539	processed_transcript		16	-1	16829281	435
ENSMUSG00000080948	processed_pseudogene	Gm14481	ENSMUST00000117178	processed_pseudogene		X	1	11220607	629
ENSMUSG00000022783	protein_coding	Spag6l	ENSMUST00000151132	processed_transcript		16	-1	16829344	464
ENSMUSG00000063458	protein_coding	Lrmda	ENSMUST00000159777	protein_coding		14	1	22019848	761
ENSMUSG00000063458	protein_coding	Lrmda	ENSMUST00000162540	protein_coding		14	1	22019848	742
ENSMUSG00000022783	protein_coding	Spag6l	ENSMUST00000141835	processed_transcript		16	-1	16829307	1012
ENSMUSG00000028223	protein_coding	Decr1	ENSMUST00000029877	protein_coding	principal1	4	-1	15945507	2959
ENSMUSG00000100626	protein_coding	H2al1a	ENSMUST00000188439	protein_coding	principal1	X	1	11299257	501
ENSMUSG00000063458	protein_coding	Lrmda	ENSMUST00000159107	processed_transcript		14	1	22310165	433
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000092433	protein_coding		10	1	69925532	5072
ENSMUSG00000028223	protein_coding	Decr1	ENSMUST00000150464	processed_transcript		4	-1	15945275	366
ENSMUSG00000028223	protein_coding	Decr1	ENSMUST00000154639	processed_transcript		4	-1	15944489	700
ENSMUSG00000063458	protein_coding	Lrmda	ENSMUST00000162337	retained_intron		14	1	22577727	1641
ENSMUSG00000042210	protein_coding	Abhd14a	ENSMUST00000171925	protein_coding		9	-1	106447678	1122
ENSMUSG00000018415	protein_coding	Gid4	ENSMUST00000070681	protein_coding	principal1	11	1	60417262	4283
ENSMUSG00000030271	protein_coding	Ogg1	ENSMUST00000032406	protein_coding	principal1	6	1	113326972	1549
ENSMUSG00000101435	lincRNA	Gm28772	ENSMUST00000189554	lincRNA		Y	1	38376499	2165
ENSMUSG00000101819	protein_coding	H2al1b	ENSMUST00000189531	protein_coding	principal1	X	1	11302432	495
ENSMUSG00000063458	protein_coding	Lrmda	ENSMUST00000226003	protein_coding		14	1	22596513	1165
ENSMUSG00000004231	protein_coding	Pax2	ENSMUST00000174490	protein_coding	principal2	19	1	44756045	4358
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000148178	protein_coding	principal3	17	-1	33686860	3934
ENSMUSG00000114205	antisense	Gm7480	ENSMUST00000225573	antisense		14	-1	22036103	852
ENSMUSG00000110309	processed_pseudogene	Gm7419	ENSMUST00000209962	processed_pseudogene		8	1	56453515	925
ENSMUSG00000030271	protein_coding	Ogg1	ENSMUST00000129871	retained_intron		6	1	113326985	837
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182269	protein_coding		10	1	69925773	4411
ENSMUSG00000110310	lincRNA	4930518J21Rik	ENSMUST00000209557	lincRNA		8	-1	56484968	573
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000183261	protein_coding		10	1	69925773	4999
ENSMUSG00000099391	lincRNA	1700003C15Rik	ENSMUST00000185360	lincRNA		5	-1	11769283	1224
ENSMUSG00000096097	protein_coding	H2al1c	ENSMUST00000178806	protein_coding	principal1	X	1	11305655	318
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000183074	protein_coding		10	1	69925773	4948
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000114385	protein_coding		17	-1	33685392	2550
ENSMUSG00000004231	protein_coding	Pax2	ENSMUST00000173346	protein_coding		19	1	44759915	1814
ENSMUSG00000042210	protein_coding	Abhd14a	ENSMUST00000185334	protein_coding	principal1	9	-1	106447443	1109
ENSMUSG00000040350	protein_coding	Trim7	ENSMUST00000109213	protein_coding		11	1	48826140	2356
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000234893	retained_intron		17	-1	33648979	591
ENSMUSG00000099391	lincRNA	1700003C15Rik	ENSMUST00000188236	lincRNA		5	-1	11769308	710
ENSMUSG00000094904	protein_coding	H2al1d	ENSMUST00000178595	protein_coding	principal1	X	1	11308824	318
ENSMUSG00000105364	processed_pseudogene	Gm8924	ENSMUST00000197405	processed_pseudogene		5	1	11691659	1132
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182029	protein_coding		10	1	69925805	3825
ENSMUSG00000100883	unprocessed_pseudogene	Gm28773	ENSMUST00000187925	unprocessed_pseudogene		Y	1	38414638	696
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182687	retained_intron		10	1	69925819	2336
ENSMUSG00000040350	protein_coding	Trim7	ENSMUST00000046903	protein_coding	principal1	11	1	48837465	2161
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000181974	protein_coding		10	1	69925954	3751
ENSMUSG00000004231	protein_coding	Pax2	ENSMUST00000004340	protein_coding	alternative2	19	1	44757394	3095
ENSMUSG00000042210	protein_coding	Abhd14a	ENSMUST00000187983	protein_coding		9	-1	106444879	709
ENSMUSG00000030271	protein_coding	Ogg1	ENSMUST00000136263	nonsense_mediated_decay		6	1	113326999	1601
ENSMUSG00000095413	protein_coding	H2al1e	ENSMUST00000178979	protein_coding	principal1	X	1	11311934	494
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182795	protein_coding		10	1	69926080	3557
ENSMUSG00000040350	protein_coding	Trim7	ENSMUST00000155478	nonsense_mediated_decay		11	1	48837471	2724
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182437	protein_coding		10	1	69926133	3113
ENSMUSG00000085923	antisense	Gm12781	ENSMUST00000146269	antisense		7	1	34653184	395
ENSMUSG00000040350	protein_coding	Trim7	ENSMUST00000216796	retained_intron		11	1	48837484	2319
ENSMUSG00000042210	protein_coding	Abhd14a	ENSMUST00000190798	protein_coding		9	-1	106447620	870
ENSMUSG00000092469	antisense	Gm20395	ENSMUST00000173799	antisense		19	-1	44784512	690
ENSMUSG00000095655	protein_coding	H2al1f	ENSMUST00000179004	protein_coding	principal1	X	1	11315158	318
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182762	retained_intron		10	1	69973799	1105
ENSMUSG00000040350	protein_coding	Trim7	ENSMUST00000149049	protein_coding		11	1	48838514	320
ENSMUSG00000030271	protein_coding	Ogg1	ENSMUST00000154350	processed_transcript		6	1	113327008	655
ENSMUSG00000042210	protein_coding	Abhd14a	ENSMUST00000187001	protein_coding		9	-1	106447517	873
ENSMUSG00000040350	protein_coding	Trim7	ENSMUST00000129674	protein_coding		11	1	48838804	298
ENSMUSG00000030271	protein_coding	Ogg1	ENSMUST00000204834	nonsense_mediated_decay		6	1	113327013	1198
ENSMUSG00000042210	protein_coding	Abhd14a	ENSMUST00000187798	retained_intron		9	-1	106444149	610
ENSMUSG00000040350	protein_coding	Trim7	ENSMUST00000131270	retained_intron		11	1	48847902	3876
ENSMUSG00000030271	protein_coding	Ogg1	ENSMUST00000203721	retained_intron		6	1	113327111	864
ENSMUSG00000106743	TEC	Gm42847	ENSMUST00000201732	TEC		5	-1	33993062	2553
ENSMUSG00000030271	protein_coding	Ogg1	ENSMUST00000147945	retained_intron		6	1	113333318	482
ENSMUSG00000042210	protein_coding	Abhd14a	ENSMUST00000048685	protein_coding	principal1	9	-1	106447678	1256
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000186247	protein_coding		10	1	69978471	8612
ENSMUSG00000100039	antisense	Gm28959	ENSMUST00000186713	antisense		9	-1	106452918	551
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000183082	protein_coding		10	1	69979362	342
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182207	protein_coding		10	1	69980323	2451
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000139302	protein_coding		17	-1	33685388	2428
ENSMUSG00000116010	lincRNA	Gm36026	ENSMUST00000230247	lincRNA		15	1	102004212	1649
ENSMUSG00000022595	protein_coding	Lypd2	ENSMUST00000023260	protein_coding	principal1	15	-1	74734329	513
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000130946	protein_coding		17	-1	33660250	634
ENSMUSG00000022595	protein_coding	Lypd2	ENSMUST00000188716	retained_intron		15	-1	74734317	374
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000194016	protein_coding	alternative1	3	-1	33083060	4206
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000087582	protein_coding	alternative2	17	-1	33685419	2370
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182606	retained_intron		10	1	69982124	630
ENSMUSG00000095662	protein_coding	H2al1g	ENSMUST00000179859	protein_coding	principal1	X	1	11318256	509
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000183023	protein_coding		10	1	69987849	2488
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000234099	processed_transcript		17	-1	33648828	391
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000234297	protein_coding		17	-1	33649687	1130
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000193681	protein_coding	alternative1	3	-1	33083060	3620
ENSMUSG00000029550	protein_coding	Sppl3	ENSMUST00000031530	protein_coding	principal1	5	1	115011137	3204
ENSMUSG00000025815	protein_coding	Dhtkd1	ENSMUST00000095147	protein_coding	principal1	2	-1	5942792	5480
ENSMUSG00000099443	protein_coding	H2al1h	ENSMUST00000177926	protein_coding	principal1	X	1	11321492	318
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000234960	retained_intron		17	-1	33659081	761
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000182665	nonsense_mediated_decay		10	1	69989935	4285
ENSMUSG00000038383	protein_coding	Pigu	ENSMUST00000077626	protein_coding	principal2	2	-1	155357430	1636
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000148258	protein_coding		17	-1	33666570	729
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000234474	protein_coding		17	-1	33685371	711
ENSMUSG00000029550	protein_coding	Sppl3	ENSMUST00000150708	processed_transcript		5	1	115011146	648
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000185582	protein_coding		10	1	69992091	534
ENSMUSG00000029550	protein_coding	Sppl3	ENSMUST00000128590	nonsense_mediated_decay		5	1	115011497	429
ENSMUSG00000025815	protein_coding	Dhtkd1	ENSMUST00000155977	processed_transcript		2	-1	5911836	663
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000183001	retained_intron		10	1	69994303	626
ENSMUSG00000029550	protein_coding	Sppl3	ENSMUST00000201970	retained_intron		5	1	115074367	2506
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000110136	protein_coding		2	-1	132578187	3546
ENSMUSG00000025815	protein_coding	Dhtkd1	ENSMUST00000127609	processed_transcript		2	-1	5924776	363
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000235089	processed_transcript		17	-1	33685401	401
ENSMUSG00000095445	protein_coding	H2al1i	ENSMUST00000164729	protein_coding	principal1	X	1	11324659	318
ENSMUSG00000025815	protein_coding	Dhtkd1	ENSMUST00000151649	processed_transcript		2	-1	5930856	663
ENSMUSG00000038383	protein_coding	Pigu	ENSMUST00000124419	retained_intron		2	-1	155357419	3057
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000192093	protein_coding	principal3	3	-1	33083060	3421
ENSMUSG00000029550	protein_coding	Sppl3	ENSMUST00000128678	retained_intron		5	1	115094757	2330
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000153608	retained_intron		17	-1	33685385	735
ENSMUSG00000050213	protein_coding	Snip1	ENSMUST00000052183	protein_coding	principal1	4	1	125066672	2345
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000193289	protein_coding	alternative1	3	-1	33083060	3526
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000234043	processed_transcript		17	-1	33685392	380
ENSMUSG00000107054	TEC	C730045M19Rik	ENSMUST00000201944	TEC		5	1	115039770	1315
ENSMUSG00000025815	protein_coding	Dhtkd1	ENSMUST00000026924	protein_coding	principal1	2	-1	5942743	3852
ENSMUSG00000036634	protein_coding	Mag	ENSMUST00000187137	protein_coding	principal2	7	-1	30914832	2434
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000107786	protein_coding	alternative2	11	-1	94474100	7984
ENSMUSG00000038383	protein_coding	Pigu	ENSMUST00000139854	processed_transcript		2	-1	155301302	5497
ENSMUSG00000059208	protein_coding	Hnrnpm	ENSMUST00000127598	retained_intron		17	-1	33685403	2626
ENSMUSG00000069038	protein_coding	H2al1j	ENSMUST00000091180	protein_coding	principal1	X	1	11327822	330
ENSMUSG00000022971	protein_coding	Ifnar2	ENSMUST00000023693	protein_coding	principal3	16	1	91372783	3047
ENSMUSG00000103602	unprocessed_pseudogene	Gm33191	ENSMUST00000195604	unprocessed_pseudogene		Y	1	17130890	699
ENSMUSG00000050213	protein_coding	Snip1	ENSMUST00000145733	processed_transcript		4	1	125066702	632
ENSMUSG00000038383	protein_coding	Pigu	ENSMUST00000125334	processed_transcript		2	-1	155304692	346
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000078226	protein_coding	principal3	3	-1	33083029	3164
ENSMUSG00000083492	processed_pseudogene	Gm14515	ENSMUST00000121327	processed_pseudogene		X	1	11601354	216
ENSMUSG00000100160	processed_pseudogene	Gm28527	ENSMUST00000185210	processed_pseudogene		1	-1	46896879	297
ENSMUSG00000036634	protein_coding	Mag	ENSMUST00000191081	protein_coding	alternative1	7	-1	30914308	2007
ENSMUSG00000080811	processed_pseudogene	Gm14513	ENSMUST00000117403	processed_pseudogene		X	-1	11684124	123
ENSMUSG00000086342	antisense	Gm12932	ENSMUST00000143705	antisense		4	-1	125084947	620
ENSMUSG00000082146	processed_pseudogene	Rpl23a-ps13	ENSMUST00000120350	processed_pseudogene		X	1	11867265	441
ENSMUSG00000036634	protein_coding	Mag	ENSMUST00000188569	protein_coding		7	-1	30914308	1826
ENSMUSG00000101921	processed_pseudogene	Gm28825	ENSMUST00000186233	processed_pseudogene		1	1	47067788	238
ENSMUSG00000022971	protein_coding	Ifnar2	ENSMUST00000134491	protein_coding		16	1	91372841	807
ENSMUSG00000101447	lincRNA	Gm28826	ENSMUST00000190006	lincRNA		1	1	47153461	488
ENSMUSG00000083439	processed_pseudogene	Gm14491	ENSMUST00000121919	processed_pseudogene		X	-1	11913289	199
ENSMUSG00000038383	protein_coding	Pigu	ENSMUST00000165234	protein_coding	alternative2	2	-1	155357424	1626
ENSMUSG00000036634	protein_coding	Mag	ENSMUST00000186422	retained_intron		7	-1	30914873	2410
ENSMUSG00000102404	TEC	5530400K19Rik	ENSMUST00000193511	TEC		1	1	153714654	1916
ENSMUSG00000081185	processed_pseudogene	Gm4852	ENSMUST00000121202	processed_pseudogene		1	-1	47366372	729
ENSMUSG00000081506	unprocessed_pseudogene	Amy2-ps1	ENSMUST00000122117	unprocessed_pseudogene		3	-1	113206697	1117
ENSMUSG00000036634	protein_coding	Mag	ENSMUST00000190638	protein_coding		7	-1	30914865	635
ENSMUSG00000103246	TEC	Gm38090	ENSMUST00000195733	TEC		1	-1	47435765	1942
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000113876	protein_coding		X	-1	95166361	5342
ENSMUSG00000100334	lincRNA	C230024C17Rik	ENSMUST00000190663	lincRNA		1	-1	153737829	3337
ENSMUSG00000036634	protein_coding	Mag	ENSMUST00000190950	protein_coding		7	-1	30914824	338
ENSMUSG00000056553	protein_coding	Ptprn2	ENSMUST00000190247	nonsense_mediated_decay		12	1	116485729	3458
ENSMUSG00000081947	processed_pseudogene	Gm14512	ENSMUST00000117924	processed_pseudogene		X	1	11984468	230
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000108224	protein_coding		3	-1	33083035	2721
ENSMUSG00000100530	processed_pseudogene	Gm18117	ENSMUST00000187720	processed_pseudogene		1	1	47478868	742
ENSMUSG00000056553	protein_coding	Ptprn2	ENSMUST00000191106	retained_intron		12	1	116485770	4218
ENSMUSG00000036634	protein_coding	Mag	ENSMUST00000191486	processed_transcript		7	-1	30914845	368
ENSMUSG00000031483	protein_coding	Erlin2	ENSMUST00000209795	protein_coding		8	1	27023261	833
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000108226	protein_coding	alternative1	3	-1	33143082	2632
ENSMUSG00000083483	processed_pseudogene	Gm14044	ENSMUST00000117531	processed_pseudogene		2	-1	130385329	447
ENSMUSG00000036634	protein_coding	Mag	ENSMUST00000040548	protein_coding	principal2	7	-1	30914327	2419
ENSMUSG00000049382	protein_coding	Krt8	ENSMUST00000023952	protein_coding	principal1	15	-1	102004482	1958
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000092434	protein_coding	principal4	10	1	69534222	5886
ENSMUSG00000110639	transcribed_unprocessed_pseudogene	Gm6831	ENSMUST00000213025	transcribed_unprocessed_pseudogene		8	1	104755779	1673
ENSMUSG00000030272	protein_coding	Camk1	ENSMUST00000032409	protein_coding	principal1	6	-1	113343984	1496
ENSMUSG00000110639	transcribed_unprocessed_pseudogene	Gm6831	ENSMUST00000159332	processed_transcript		8	1	104756548	425
ENSMUSG00000013483	protein_coding	Card14	ENSMUST00000106250	protein_coding	principal1	11	1	119307768	4206
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000047061	protein_coding		10	1	69534222	2517
ENSMUSG00000031483	protein_coding	Erlin2	ENSMUST00000209976	protein_coding		8	1	27023437	554
ENSMUSG00000022971	protein_coding	Ifnar2	ENSMUST00000117836	protein_coding	alternative2	16	1	91372850	1099
ENSMUSG00000104067	TEC	Gm37196	ENSMUST00000194762	TEC		1	1	47605996	906
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000092432	protein_coding	alternative2	10	1	69534222	5832
ENSMUSG00000030084	protein_coding	Plxna1	ENSMUST00000163139	protein_coding	principal1	6	-1	89362620	9034
ENSMUSG00000030272	protein_coding	Camk1	ENSMUST00000153067	retained_intron		6	-1	113336621	2398
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000092431	protein_coding	alternative2	10	1	69534222	5823
ENSMUSG00000069601	protein_coding	Ank3	ENSMUST00000054167	protein_coding	alternative2	10	1	69534222	5769
ENSMUSG00000022971	protein_coding	Ifnar2	ENSMUST00000089042	protein_coding	alternative2	16	1	91372899	2580
ENSMUSG00000029049	protein_coding	Morn1	ENSMUST00000132367	nonsense_mediated_decay		4	1	155086577	1662
ENSMUSG00000032469	protein_coding	Dbr1	ENSMUST00000066650	protein_coding	principal1	9	1	99575799	2261
ENSMUSG00000030084	protein_coding	Plxna1	ENSMUST00000205230	retained_intron		6	-1	89321089	372
ENSMUSG00000022971	protein_coding	Ifnar2	ENSMUST00000139503	protein_coding		16	1	91387789	384
ENSMUSG00000020732	protein_coding	Rab37	ENSMUST00000067754	protein_coding	alternative1	11	1	115091431	2577
ENSMUSG00000075605	protein_coding	Slurp2	ENSMUST00000057932	protein_coding	principal1	15	-1	74746693	545
ENSMUSG00000056553	protein_coding	Ptprn2	ENSMUST00000070733	protein_coding	principal1	12	1	116485833	3201
ENSMUSG00000100475	lincRNA	Gm29543	ENSMUST00000188138	lincRNA		13	1	96133369	967
ENSMUSG00000113743	processed_pseudogene	Gm8712	ENSMUST00000221090	processed_pseudogene		13	1	96376930	701
ENSMUSG00000032469	protein_coding	Dbr1	ENSMUST00000148987	protein_coding		9	1	99575828	796
ENSMUSG00000030084	protein_coding	Plxna1	ENSMUST00000204468	nonsense_mediated_decay		6	-1	89324633	678
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000108221	protein_coding		3	-1	32985079	1187
ENSMUSG00000038155	protein_coding	Gstp2	ENSMUST00000042700	protein_coding	principal1	19	-1	4042263	797
ENSMUSG00000113795	processed_pseudogene	Gm48119	ENSMUST00000220994	processed_pseudogene		12	-1	116853102	2625
ENSMUSG00000032469	protein_coding	Dbr1	ENSMUST00000156035	protein_coding		9	1	99576080	485
ENSMUSG00000020732	protein_coding	Rab37	ENSMUST00000131046	retained_intron		11	1	115091431	2608
ENSMUSG00000032469	protein_coding	Dbr1	ENSMUST00000138002	protein_coding		9	1	99576108	491
ENSMUSG00000030084	protein_coding	Plxna1	ENSMUST00000204997	processed_transcript		6	-1	89333070	735
ENSMUSG00000101930	antisense	Gm5441	ENSMUST00000190132	antisense		12	-1	117337012	449
ENSMUSG00000049506	protein_coding	Sppl2c	ENSMUST00000107000	protein_coding	principal4	11	1	104186327	2225
ENSMUSG00000074268	protein_coding	Amy2a5	ENSMUST00000098673	protein_coding	principal1	3	-1	113258837	3715
ENSMUSG00000038155	protein_coding	Gstp2	ENSMUST00000237565	retained_intron		19	-1	4040883	429
ENSMUSG00000030272	protein_coding	Camk1	ENSMUST00000149497	retained_intron		6	-1	113343904	1486
ENSMUSG00000030272	protein_coding	Camk1	ENSMUST00000156512	retained_intron		6	-1	113340917	2359
ENSMUSG00000099568	antisense	Gm28513	ENSMUST00000191474	antisense		1	-1	153749324	613
ENSMUSG00000030272	protein_coding	Camk1	ENSMUST00000155543	protein_coding		6	-1	113343978	663
ENSMUSG00000032469	protein_coding	Dbr1	ENSMUST00000139796	nonsense_mediated_decay		9	1	99580202	842
ENSMUSG00000038155	protein_coding	Gstp2	ENSMUST00000237650	retained_intron		19	-1	4041528	488
ENSMUSG00000101930	antisense	Gm5441	ENSMUST00000186454	antisense		12	-1	117337022	5181
ENSMUSG00000101236	processed_pseudogene	Gm6750	ENSMUST00000189273	processed_pseudogene		12	-1	116507883	268
ENSMUSG00000030084	protein_coding	Plxna1	ENSMUST00000205121	nonsense_mediated_decay		6	-1	89342591	459
ENSMUSG00000030272	protein_coding	Camk1	ENSMUST00000156853	retained_intron		6	-1	113343963	1208
ENSMUSG00000030499	protein_coding	Kctd15	ENSMUST00000108069	protein_coding	principal1	7	-1	34654398	2407
ENSMUSG00000038155	protein_coding	Gstp2	ENSMUST00000235381	protein_coding		19	-1	4046023	436
ENSMUSG00000049506	protein_coding	Sppl2c	ENSMUST00000059448	protein_coding	alternative2	11	1	104186327	2217
ENSMUSG00000074268	protein_coding	Amy2a5	ENSMUST00000144352	retained_intron		3	-1	113258651	542
ENSMUSG00000032469	protein_coding	Dbr1	ENSMUST00000136884	protein_coding		9	1	99580297	521
ENSMUSG00000109331	processed_pseudogene	Gm42402	ENSMUST00000208341	processed_pseudogene		7	1	51697917	1054
ENSMUSG00000029049	protein_coding	Morn1	ENSMUST00000030915	protein_coding	principal1	4	1	155086577	1659
ENSMUSG00000099907	processed_transcript	Gm10421	ENSMUST00000190266	antisense		12	-1	117151215	781
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000108219	retained_intron		3	-1	33143247	2564
ENSMUSG00000078636	processed_pseudogene	Gm7336	ENSMUST00000107041	processed_pseudogene		7	1	51746647	1232
ENSMUSG00000030084	protein_coding	Plxna1	ENSMUST00000049845	protein_coding	principal1	6	-1	89357717	5810
ENSMUSG00000099907	processed_transcript	Gm10421	ENSMUST00000185746	retained_intron		12	-1	117151269	3118
ENSMUSG00000021595	protein_coding	Nsun2	ENSMUST00000109699	protein_coding	principal2	13	1	69612016	2834
ENSMUSG00000099907	processed_transcript	Gm10421	ENSMUST00000186114	antisense		12	-1	117151651	132
ENSMUSG00000038155	protein_coding	Gstp2	ENSMUST00000235657	protein_coding		19	-1	4045992	509
ENSMUSG00000107570	TEC	Gm44207	ENSMUST00000204568	TEC		6	1	89345140	1424
ENSMUSG00000020732	protein_coding	Rab37	ENSMUST00000021076	protein_coding	principal3	11	1	115154157	2210
ENSMUSG00000030499	protein_coding	Kctd15	ENSMUST00000108070	protein_coding	principal1	7	-1	34652837	2409
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000155264	processed_transcript		3	-1	33143076	658
ENSMUSG00000029049	protein_coding	Morn1	ENSMUST00000155775	protein_coding		4	1	155086589	389
ENSMUSG00000038155	protein_coding	Gstp2	ENSMUST00000237999	protein_coding		19	-1	4042218	321
ENSMUSG00000021595	protein_coding	Nsun2	ENSMUST00000176485	protein_coding	alternative2	13	1	69612049	2408
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000194627	retained_intron		3	-1	33143183	3214
ENSMUSG00000023043	protein_coding	Krt18	ENSMUST00000023803	protein_coding	principal1	15	1	102028180	1437
ENSMUSG00000063334	protein_coding	Krr1	ENSMUST00000163048	protein_coding	principal1	10	1	111972664	5023
ENSMUSG00000027674	protein_coding	Pex5l	ENSMUST00000108225	protein_coding	principal3	3	-1	33082068	3109
ENSMUSG00000013483	protein_coding	Card14	ENSMUST00000147167	processed_transcript		11	1	119321853	3141
ENSMUSG00000029049	protein_coding	Morn1	ENSMUST00000127457	protein_coding		4	1	155086603	646
ENSMUSG00000020732	protein_coding	Rab37	ENSMUST00000156383	retained_intron		11	1	115154203	712
ENSMUSG00000030499	protein_coding	Kctd15	ENSMUST00000032709	protein_coding	principal1	7	-1	34655509	2480
ENSMUSG00000021595	protein_coding	Nsun2	ENSMUST00000022087	protein_coding	alternative2	13	1	69612244	4164
ENSMUSG00000013483	protein_coding	Card14	ENSMUST00000151052	processed_transcript		11	1	119324147	3341
ENSMUSG00000063334	protein_coding	Krr1	ENSMUST00000162678	retained_intron		10	1	111972757	1149
ENSMUSG00000030499	protein_coding	Kctd15	ENSMUST00000205419	processed_transcript		7	-1	34648744	743
ENSMUSG00000102586	lincRNA	Gm38003	ENSMUST00000191968	lincRNA		Y	-1	17228678	1504
ENSMUSG00000013483	protein_coding	Card14	ENSMUST00000053245	protein_coding	principal1	11	1	119314787	3958
ENSMUSG00000037953	protein_coding	A4gnt	ENSMUST00000042553	protein_coding	principal1	9	1	99612502	2757
ENSMUSG00000030499	protein_coding	Kctd15	ENSMUST00000206501	protein_coding		7	-1	34654389	417
ENSMUSG00000047798	protein_coding	Cd300lf	ENSMUST00000124083	processed_transcript		11	-1	115126850	615
ENSMUSG00000021595	protein_coding	Nsun2	ENSMUST00000127854	processed_transcript		13	1	69612603	539
ENSMUSG00000063334	protein_coding	Krr1	ENSMUST00000075924	retained_intron		10	1	111972775	3451
ENSMUSG00000032648	protein_coding	Pygm	ENSMUST00000035269	protein_coding	principal1	19	1	6384399	2874
ENSMUSG00000047798	protein_coding	Cd300lf	ENSMUST00000127927	processed_transcript		11	-1	115126797	608
ENSMUSG00000102586	lincRNA	Gm38003	ENSMUST00000194569	lincRNA		Y	-1	17228224	437
ENSMUSG00000102586	lincRNA	Gm38003	ENSMUST00000194080	lincRNA		Y	-1	17228224	621
ENSMUSG00000047798	protein_coding	Cd300lf	ENSMUST00000149335	processed_transcript		11	-1	115126791	569
ENSMUSG00000021595	protein_coding	Nsun2	ENSMUST00000136932	retained_intron		13	1	69621311	897
ENSMUSG00000056204	protein_coding	Pgpep1	ENSMUST00000070173	protein_coding	principal1	8	-1	70659738	4883
ENSMUSG00000063334	protein_coding	Krr1	ENSMUST00000174653	protein_coding		10	1	111972793	972
ENSMUSG00000032648	protein_coding	Pygm	ENSMUST00000113483	protein_coding		19	1	6384415	2583
ENSMUSG00000021595	protein_coding	Nsun2	ENSMUST00000136891	retained_intron		13	1	69630740	713
ENSMUSG00000005043	protein_coding	Sgsh	ENSMUST00000136523	nonsense_mediated_decay		11	-1	119355502	4191
ENSMUSG00000032782	protein_coding	Cntrob	ENSMUST00000156671	retained_intron		11	-1	69300490	752
ENSMUSG00000056204	protein_coding	Pgpep1	ENSMUST00000211715	protein_coding		8	-1	70659651	676
ENSMUSG00000091133	sense_overlapping	Gm17108	ENSMUST00000168625	sense_overlapping		13	-1	69614901	2877
ENSMUSG00000032648	protein_coding	Pygm	ENSMUST00000142755	retained_intron		19	1	6392711	638
ENSMUSG00000106991	TEC	Gm43399	ENSMUST00000202546	TEC		5	-1	119598204	2374
ENSMUSG00000087625	antisense	4930419G24Rik	ENSMUST00000125494	antisense		3	1	33024777	1058
ENSMUSG00000026475	protein_coding	Rgs16	ENSMUST00000027748	protein_coding	principal1	1	1	153740349	2339
ENSMUSG00000032648	protein_coding	Pygm	ENSMUST00000139775	retained_intron		19	1	6397495	532
ENSMUSG00000030499	protein_coding	Kctd15	ENSMUST00000127425	processed_transcript		7	-1	34653026	144
ENSMUSG00000102498	TEC	Gm19445	ENSMUST00000193649	TEC		3	-1	33076356	2438
ENSMUSG00000085708	lincRNA	Gm16063	ENSMUST00000156235	lincRNA		5	1	119625942	1701
ENSMUSG00000109234	unprocessed_pseudogene	Gm44561	ENSMUST00000208869	unprocessed_pseudogene		7	1	18760858	264
ENSMUSG00000102581	TEC	Gm37443	ENSMUST00000193458	TEC		3	-1	33037054	2827
ENSMUSG00000030499	protein_coding	Kctd15	ENSMUST00000155093	processed_transcript		7	-1	34653312	157
ENSMUSG00000030499	protein_coding	Kctd15	ENSMUST00000205843	processed_transcript		7	-1	34656732	1363
ENSMUSG00000029049	protein_coding	Morn1	ENSMUST00000155375	processed_transcript		4	1	155086614	2707
ENSMUSG00000085345	lincRNA	Gm16064	ENSMUST00000154997	lincRNA		5	1	119646134	464
ENSMUSG00000029049	protein_coding	Morn1	ENSMUST00000129180	processed_transcript		4	1	155086628	754
ENSMUSG00000018604	protein_coding	Tbx3	ENSMUST00000202034	retained_intron		5	1	119670669	2995
ENSMUSG00000029049	protein_coding	Morn1	ENSMUST00000151710	retained_intron		4	1	155102194	758
ENSMUSG00000020515	protein_coding	Cnot8	ENSMUST00000020822	protein_coding	principal1	11	1	58104153	2035
ENSMUSG00000056204	protein_coding	Pgpep1	ENSMUST00000211526	processed_transcript		8	-1	70655379	805
ENSMUSG00000029049	protein_coding	Morn1	ENSMUST00000129415	retained_intron		4	1	155110690	635
ENSMUSG00000041415	protein_coding	Dicer1	ENSMUST00000041987	protein_coding	principal1	12	-1	104751952	9851
ENSMUSG00000020515	protein_coding	Cnot8	ENSMUST00000134896	protein_coding		11	1	58104366	750
ENSMUSG00000056204	protein_coding	Pgpep1	ENSMUST00000210459	retained_intron		8	-1	70658912	739
ENSMUSG00000020515	protein_coding	Cnot8	ENSMUST00000108843	protein_coding	principal1	11	1	58104229	2099
ENSMUSG00000037784	protein_coding	Dzip1l	ENSMUST00000131095	protein_coding		9	1	99629496	736
ENSMUSG00000056204	protein_coding	Pgpep1	ENSMUST00000210307	protein_coding		8	-1	70659651	720
ENSMUSG00000020515	protein_coding	Cnot8	ENSMUST00000133923	processed_transcript		11	1	58114027	231
ENSMUSG00000056204	protein_coding	Pgpep1	ENSMUST00000209768	protein_coding		8	-1	70659668	381
ENSMUSG00000022342	protein_coding	Kcnv1	ENSMUST00000022967	protein_coding	principal1	15	-1	45114827	4389
ENSMUSG00000056204	protein_coding	Pgpep1	ENSMUST00000210193	protein_coding		8	-1	70660388	369
ENSMUSG00000056888	protein_coding	Glipr1	ENSMUST00000162508	protein_coding	principal1	10	-1	112002621	1183
ENSMUSG00000056204	protein_coding	Pgpep1	ENSMUST00000210786	nonsense_mediated_decay		8	-1	70657438	288
ENSMUSG00000022342	protein_coding	Kcnv1	ENSMUST00000228536	retained_intron		15	-1	45114920	1385
ENSMUSG00000056888	protein_coding	Glipr1	ENSMUST00000161870	protein_coding		10	-1	111993488	474
ENSMUSG00000042447	protein_coding	Mios	ENSMUST00000040017	protein_coding	principal1	6	1	8209222	3710
ENSMUSG00000118565	processed_pseudogene	AC099642.1	ENSMUST00000238897	processed_pseudogene		15	1	45161451	2359
ENSMUSG00000040613	protein_coding	Apobec1	ENSMUST00000112586	protein_coding	principal1	6	-1	122602444	2265
ENSMUSG00000115549	processed_pseudogene	Gm2203	ENSMUST00000228018	processed_pseudogene		15	1	45962526	934
ENSMUSG00000041415	protein_coding	Dicer1	ENSMUST00000222528	processed_transcript		12	-1	104722052	4724
ENSMUSG00000031483	protein_coding	Erlin2	ENSMUST00000033873	protein_coding	principal1	8	1	27023799	4838
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000060955	protein_coding	principal1	2	-1	132578233	3686
ENSMUSG00000096157	processed_pseudogene	Gm5472	ENSMUST00000178604	processed_pseudogene		15	-1	45980037	1678
ENSMUSG00000041415	protein_coding	Dicer1	ENSMUST00000222115	retained_intron		12	-1	104700502	2543
ENSMUSG00000032782	protein_coding	Cntrob	ENSMUST00000123176	nonsense_mediated_decay		11	-1	69323775	3776
ENSMUSG00000056888	protein_coding	Glipr1	ENSMUST00000159550	processed_transcript		10	-1	112002631	352
ENSMUSG00000041415	protein_coding	Dicer1	ENSMUST00000222519	processed_transcript		12	-1	104700502	647
ENSMUSG00000042447	protein_coding	Mios	ENSMUST00000160265	retained_intron		6	1	8226635	2783
ENSMUSG00000115197	processed_pseudogene	Gm49075	ENSMUST00000228812	processed_pseudogene		15	-1	46178760	412
ENSMUSG00000025867	protein_coding	Cplx2	ENSMUST00000026985	protein_coding	principal1	13	1	54371349	4928
ENSMUSG00000056888	protein_coding	Glipr1	ENSMUST00000174201	processed_transcript		10	-1	111995815	446
ENSMUSG00000031483	protein_coding	Erlin2	ENSMUST00000211043	protein_coding		8	1	27023807	686
ENSMUSG00000041415	protein_coding	Dicer1	ENSMUST00000221293	retained_intron		12	-1	104730164	6904
ENSMUSG00000042447	protein_coding	Mios	ENSMUST00000161134	retained_intron		6	1	8229505	3028
ENSMUSG00000102170	unprocessed_pseudogene	Gm20781	ENSMUST00000193154	unprocessed_pseudogene		Y	1	17275991	693
ENSMUSG00000041415	protein_coding	Dicer1	ENSMUST00000222002	protein_coding		12	-1	104738837	1460
ENSMUSG00000031483	protein_coding	Erlin2	ENSMUST00000209563	protein_coding		8	1	27023866	965
ENSMUSG00000112581	bidirectional_promoter_lncRNA	1700022H01Rik	ENSMUST00000219142	bidirectional_promoter_lncRNA		10	-1	61680255	387
ENSMUSG00000056888	protein_coding	Glipr1	ENSMUST00000074805	protein_coding	principal1	10	-1	111997264	1081
ENSMUSG00000029219	protein_coding	Slc10a4	ENSMUST00000031127	protein_coding	principal1	5	1	73006883	2106
ENSMUSG00000040613	protein_coding	Apobec1	ENSMUST00000112585	protein_coding	principal1	6	-1	122602371	2127
ENSMUSG00000118381	processed_pseudogene	Gm50150	ENSMUST00000237671	processed_pseudogene		19	-1	38342614	269
ENSMUSG00000031483	protein_coding	Erlin2	ENSMUST00000209520	protein_coding		8	1	27023901	940
ENSMUSG00000040613	protein_coding	Apobec1	ENSMUST00000203309	protein_coding		6	-1	122602387	666
ENSMUSG00000086137	lincRNA	Gm16248	ENSMUST00000124238	lincRNA		13	-1	54399334	243
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000149854	nonsense_mediated_decay		2	-1	132578235	3612
ENSMUSG00000031375	protein_coding	Bgn	ENSMUST00000133394	processed_transcript		X	1	73483602	828
ENSMUSG00000029219	protein_coding	Slc10a4	ENSMUST00000201304	protein_coding		5	1	73006903	1419
ENSMUSG00000095365	protein_coding	Rbm31y	ENSMUST00000179408	protein_coding	principal1	Y	1	17400761	1955
ENSMUSG00000031483	protein_coding	Erlin2	ENSMUST00000209504	protein_coding		8	1	27029375	752
ENSMUSG00000040613	protein_coding	Apobec1	ENSMUST00000203204	protein_coding		6	-1	122600358	775
ENSMUSG00000005043	protein_coding	Sgsh	ENSMUST00000005173	protein_coding	principal1	11	-1	119355536	4357
ENSMUSG00000040613	protein_coding	Apobec1	ENSMUST00000203197	protein_coding		6	-1	122602329	372
ENSMUSG00000040613	protein_coding	Apobec1	ENSMUST00000147760	protein_coding		6	-1	122602370	360
ENSMUSG00000031483	protein_coding	Erlin2	ENSMUST00000210445	retained_intron		8	1	27031314	345
ENSMUSG00000031505	protein_coding	Naxd	ENSMUST00000177955	protein_coding	principal1	8	1	11497506	1307
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000145694	nonsense_mediated_decay		2	-1	132578248	3577
ENSMUSG00000040613	protein_coding	Apobec1	ENSMUST00000143356	retained_intron		6	-1	122602364	560
ENSMUSG00000005043	protein_coding	Sgsh	ENSMUST00000100172	protein_coding		11	-1	119355510	4223
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000028822	protein_coding		2	-1	132578133	3179
ENSMUSG00000031483	protein_coding	Erlin2	ENSMUST00000211233	nonsense_mediated_decay		8	1	27031322	326
ENSMUSG00000005043	protein_coding	Sgsh	ENSMUST00000133507	processed_transcript		11	-1	119355530	1485
ENSMUSG00000040613	protein_coding	Apobec1	ENSMUST00000204035	retained_intron		6	-1	122600438	520
ENSMUSG00000025178	protein_coding	Pi4k2a	ENSMUST00000235932	protein_coding	principal1	19	1	42090470	1939
ENSMUSG00000005043	protein_coding	Sgsh	ENSMUST00000126132	processed_transcript		11	-1	119347861	548
ENSMUSG00000104837	TEC	Gm42520	ENSMUST00000199642	TEC		5	1	45556680	1502
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000124632	nonsense_mediated_decay		2	-1	132538127	581
ENSMUSG00000005043	protein_coding	Sgsh	ENSMUST00000141540	processed_transcript		11	-1	119352699	403
ENSMUSG00000031505	protein_coding	Naxd	ENSMUST00000178817	nonsense_mediated_decay		8	1	11497567	2830
ENSMUSG00000040613	protein_coding	Apobec1	ENSMUST00000112587	protein_coding	principal1	6	-1	122600127	2072
ENSMUSG00000097825	antisense	9630001P10Rik	ENSMUST00000181335	antisense		5	1	45638699	3006
ENSMUSG00000102778	antisense	Gm38165	ENSMUST00000191654	antisense		18	-1	61692384	486
ENSMUSG00000095464	protein_coding	Gm21987	ENSMUST00000119704	protein_coding	principal1	16	1	38347040	456
ENSMUSG00000022237	protein_coding	Ankrd33b	ENSMUST00000123325	protein_coding	alternative2	15	-1	31367726	7466
ENSMUSG00000025178	protein_coding	Pi4k2a	ENSMUST00000066778	protein_coding	principal1	19	1	42090471	3604
ENSMUSG00000097825	antisense	9630001P10Rik	ENSMUST00000181083	antisense		5	1	45639287	2799
ENSMUSG00000024578	protein_coding	Il17b	ENSMUST00000237575	processed_transcript		18	1	61684887	846
ENSMUSG00000031505	protein_coding	Naxd	ENSMUST00000033901	protein_coding		8	1	11497568	1359
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000197364	protein_coding		X	-1	95196502	1796
ENSMUSG00000097825	antisense	9630001P10Rik	ENSMUST00000200144	antisense		5	1	45639381	2671
ENSMUSG00000041945	protein_coding	Mfsd9	ENSMUST00000039672	protein_coding	principal1	1	-1	40790663	3160
ENSMUSG00000024578	protein_coding	Il17b	ENSMUST00000235713	nonsense_mediated_decay		18	1	61687915	748
ENSMUSG00000105745	TEC	Gm42521	ENSMUST00000199190	TEC		5	1	45531072	2040
ENSMUSG00000022237	protein_coding	Ankrd33b	ENSMUST00000156679	nonsense_mediated_decay		15	-1	31367532	5661
ENSMUSG00000031505	protein_coding	Naxd	ENSMUST00000178721	protein_coding		8	1	11497584	1108
ENSMUSG00000025178	protein_coding	Pi4k2a	ENSMUST00000235988	nonsense_mediated_decay		19	1	42090494	4267
ENSMUSG00000022237	protein_coding	Ankrd33b	ENSMUST00000044324	nonsense_mediated_decay		15	-1	31367726	4719
ENSMUSG00000015879	protein_coding	Fam184b	ENSMUST00000198680	retained_intron		5	-1	45536542	5911
ENSMUSG00000105004	TEC	Gm43075	ENSMUST00000198613	TEC		3	1	97609932	3905
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000124107	protein_coding		2	-1	132578187	710
ENSMUSG00000025178	protein_coding	Pi4k2a	ENSMUST00000238085	retained_intron		19	1	42114678	3381
ENSMUSG00000031505	protein_coding	Naxd	ENSMUST00000209932	retained_intron		8	1	11497587	664
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000110135	protein_coding		2	-1	132587729	603
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000107791	protein_coding	alternative2	11	-1	94474100	8002
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000163492	protein_coding	principal3	17	-1	45592575	2216
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000113883	protein_coding	alternative1	X	-1	95166408	5399
ENSMUSG00000024578	protein_coding	Il17b	ENSMUST00000025471	protein_coding	principal1	18	1	61687935	693
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000140867	processed_transcript		2	-1	132578217	459
ENSMUSG00000018924	protein_coding	Alox15	ENSMUST00000019068	protein_coding	principal1	11	-1	70352031	2409
ENSMUSG00000022237	protein_coding	Ankrd33b	ENSMUST00000110410	protein_coding	principal3	15	-1	31367543	2070
ENSMUSG00000041945	protein_coding	Mfsd9	ENSMUST00000131390	nonsense_mediated_decay		1	-1	40790687	3311
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000131617	processed_transcript		2	-1	132578246	334
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000113885	protein_coding		X	-1	95166384	4578
ENSMUSG00000027408	protein_coding	Cpxm1	ENSMUST00000028897	protein_coding	principal1	2	-1	130397574	2366
ENSMUSG00000046516	protein_coding	Cox17	ENSMUST00000050273	protein_coding	principal1	16	1	38346991	444
ENSMUSG00000031505	protein_coding	Naxd	ENSMUST00000178364	retained_intron		8	1	11497593	684
ENSMUSG00000027346	protein_coding	Gpcpd1	ENSMUST00000110142	protein_coding	principal1	2	-1	132578248	3703
ENSMUSG00000022237	protein_coding	Ankrd33b	ENSMUST00000227867	processed_transcript		15	-1	31308194	593
ENSMUSG00000026904	protein_coding	Slc4a10	ENSMUST00000102735	protein_coding	principal3	2	1	62046462	5482
ENSMUSG00000018924	protein_coding	Alox15	ENSMUST00000130000	processed_transcript		11	-1	70345696	432
ENSMUSG00000041945	protein_coding	Mfsd9	ENSMUST00000144385	retained_intron		1	-1	40790657	2425
ENSMUSG00000031505	protein_coding	Naxd	ENSMUST00000180269	retained_intron		8	1	11497633	749
ENSMUSG00000027408	protein_coding	Cpxm1	ENSMUST00000130533	retained_intron		2	-1	130393276	676
ENSMUSG00000103270	antisense	Gm37915	ENSMUST00000195134	antisense		1	1	40771385	3261
ENSMUSG00000026904	protein_coding	Slc4a10	ENSMUST00000112480	protein_coding	alternative2	2	1	62046645	5389
ENSMUSG00000046516	protein_coding	Cox17	ENSMUST00000152868	processed_transcript		16	1	38346996	416
ENSMUSG00000116729	processed_pseudogene	Gm49644	ENSMUST00000231706	processed_pseudogene		16	-1	16849698	302
ENSMUSG00000031505	protein_coding	Naxd	ENSMUST00000178382	retained_intron		8	1	11509962	759
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000182001	protein_coding		X	-1	95166474	4622
ENSMUSG00000022237	protein_coding	Ankrd33b	ENSMUST00000076942	protein_coding		15	-1	31367568	1641
ENSMUSG00000031505	protein_coding	Naxd	ENSMUST00000210316	retained_intron		8	1	11512386	902
ENSMUSG00000067173	protein_coding	Mrgpra4	ENSMUST00000087092	protein_coding	principal1	7	-1	47982095	1259
ENSMUSG00000079557	protein_coding	Marchf2	ENSMUST00000172934	nonsense_mediated_decay		17	-1	33718670	2481
ENSMUSG00000046516	protein_coding	Cox17	ENSMUST00000120495	protein_coding	principal1	16	1	38347022	3690
ENSMUSG00000022237	protein_coding	Ankrd33b	ENSMUST00000227391	processed_transcript		15	-1	31325249	641
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000103166	protein_coding	alternative2	11	-1	94474100	8104
ENSMUSG00000112597	processed_pseudogene	Gm4777	ENSMUST00000218577	processed_pseudogene		10	1	25053359	1025
ENSMUSG00000046516	protein_coding	Cox17	ENSMUST00000144812	retained_intron		16	1	38347040	2396
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000107792	protein_coding	alternative2	11	-1	94474100	7981
ENSMUSG00000097443	antisense	Gm17529	ENSMUST00000180738	antisense		12	1	58953089	3093
ENSMUSG00000108915	processed_pseudogene	Gm44966	ENSMUST00000208096	processed_pseudogene		7	1	119752677	157
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000100561	protein_coding	principal3	11	-1	94474100	8125
ENSMUSG00000082779	processed_pseudogene	Gm13162	ENSMUST00000121481	processed_pseudogene		4	1	147125256	454
ENSMUSG00000046516	protein_coding	Cox17	ENSMUST00000134709	retained_intron		16	1	38349240	471
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000113878	protein_coding	principal2	X	-1	95166486	5012
ENSMUSG00000037679	protein_coding	Inf2	ENSMUST00000101029	protein_coding	principal1	12	1	112588784	4001
ENSMUSG00000094849	unprocessed_pseudogene	Vmn2r-ps18	ENSMUST00000177972	unprocessed_pseudogene		4	1	147126130	380
ENSMUSG00000026904	protein_coding	Slc4a10	ENSMUST00000155219	processed_transcript		2	1	62046585	3590
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000107793	protein_coding	alternative2	11	-1	94474100	8071
ENSMUSG00000046516	protein_coding	Cox17	ENSMUST00000156026	processed_transcript		16	1	38349292	213
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000107788	protein_coding	alternative2	11	-1	94474100	8050
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000107790	protein_coding	alternative2	11	-1	94474100	8035
ENSMUSG00000106788	antisense	Gm43449	ENSMUST00000202955	antisense		5	-1	90515931	371
ENSMUSG00000026904	protein_coding	Slc4a10	ENSMUST00000054484	protein_coding	alternative2	2	1	62046585	5320
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000181987	protein_coding		X	-1	95196505	6222
ENSMUSG00000037679	protein_coding	Inf2	ENSMUST00000220786	protein_coding		12	1	112589266	352
ENSMUSG00000037679	protein_coding	Inf2	ENSMUST00000222275	protein_coding		12	1	112604657	2795
ENSMUSG00000026904	protein_coding	Slc4a10	ENSMUST00000149527	processed_transcript		2	1	62147862	348
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000107789	protein_coding	alternative2	11	-1	94474100	8383
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000113884	protein_coding		X	-1	95196833	3784
ENSMUSG00000026904	protein_coding	Slc4a10	ENSMUST00000147917	processed_transcript		2	1	62267043	785
ENSMUSG00000097027	bidirectional_promoter_lncRNA	Gm26559	ENSMUST00000181939	bidirectional_promoter_lncRNA		13	1	99516629	2481
ENSMUSG00000026904	protein_coding	Slc4a10	ENSMUST00000156534	processed_transcript		2	1	62317390	778
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000107785	protein_coding	alternative2	11	-1	94474100	7523
ENSMUSG00000079557	protein_coding	Marchf2	ENSMUST00000066121	protein_coding		17	-1	33718645	3400
ENSMUSG00000022594	protein_coding	Lynx1	ENSMUST00000023259	protein_coding	principal1	15	-1	74753046	4023
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000133331	processed_transcript		11	-1	94411679	434
ENSMUSG00000050270	protein_coding	Tmem220	ENSMUST00000079077	protein_coding	principal3	11	1	67025154	1147
ENSMUSG00000079557	protein_coding	Marchf2	ENSMUST00000167611	nonsense_mediated_decay		17	-1	33718645	2470
ENSMUSG00000060512	protein_coding	0610040J01Rik	ENSMUST00000081747	protein_coding	principal1	5	1	63812363	2008
ENSMUSG00000110947	protein_coding	Olfr1333	ENSMUST00000214477	protein_coding	alternative2	4	-1	118836279	2996
ENSMUSG00000079557	protein_coding	Marchf2	ENSMUST00000173015	protein_coding		17	-1	33718640	1418
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000128565	protein_coding		X	-1	95196821	2285
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000146160	processed_transcript		11	-1	94417187	749
ENSMUSG00000022594	protein_coding	Lynx1	ENSMUST00000189128	protein_coding		15	-1	74753014	436
ENSMUSG00000060512	protein_coding	0610040J01Rik	ENSMUST00000196575	protein_coding		5	1	63812520	935
ENSMUSG00000110947	protein_coding	Olfr1333	ENSMUST00000076019	protein_coding	principal2	4	-1	118830438	954
ENSMUSG00000050270	protein_coding	Tmem220	ENSMUST00000061786	protein_coding	alternative2	11	1	67025154	1597
ENSMUSG00000032782	protein_coding	Cntrob	ENSMUST00000092973	protein_coding	principal1	11	-1	69323775	3861
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000142190	processed_transcript		11	-1	94424343	797
ENSMUSG00000022594	protein_coding	Lynx1	ENSMUST00000189696	retained_intron		15	-1	74753024	706
ENSMUSG00000079557	protein_coding	Marchf2	ENSMUST00000172767	protein_coding	principal1	17	-1	33718670	1398
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000133000	processed_transcript		11	-1	94426462	784
ENSMUSG00000060512	protein_coding	0610040J01Rik	ENSMUST00000196367	protein_coding		5	1	63876309	557
ENSMUSG00000022803	protein_coding	Popdc2	ENSMUST00000023494	protein_coding	principal4	16	1	38362209	2169
ENSMUSG00000079557	protein_coding	Marchf2	ENSMUST00000173454	protein_coding		17	-1	33703201	690
ENSMUSG00000060512	protein_coding	0610040J01Rik	ENSMUST00000199667	protein_coding		5	1	63877476	741
ENSMUSG00000107373	TEC	Gm42668	ENSMUST00000200747	TEC		5	1	73015199	2487
ENSMUSG00000032782	protein_coding	Cntrob	ENSMUST00000176938	protein_coding		11	-1	69319467	450
ENSMUSG00000079557	protein_coding	Marchf2	ENSMUST00000173329	protein_coding		17	-1	33718657	2566
ENSMUSG00000103927	lincRNA	Gm9932	ENSMUST00000194154	lincRNA		5	1	100196611	2116
ENSMUSG00000032744	protein_coding	Heyl	ENSMUST00000040821	protein_coding	principal1	4	1	123233556	4537
ENSMUSG00000079557	protein_coding	Marchf2	ENSMUST00000174040	protein_coding		17	-1	33718591	811
ENSMUSG00000032782	protein_coding	Cntrob	ENSMUST00000130780	protein_coding		11	-1	69303154	424
ENSMUSG00000081849	unitary_pseudogene	Gm15847	ENSMUST00000121417	unitary_pseudogene		5	1	73013528	1065
ENSMUSG00000047661	lincRNA	1600012P17Rik	ENSMUST00000062159	lincRNA		1	-1	158980463	2475
ENSMUSG00000079557	protein_coding	Marchf2	ENSMUST00000173392	protein_coding		17	-1	33713381	356
ENSMUSG00000079557	protein_coding	Marchf2	ENSMUST00000186022	protein_coding		17	-1	33718645	2470
ENSMUSG00000032782	protein_coding	Cntrob	ENSMUST00000156175	retained_intron		11	-1	69304977	2341
ENSMUSG00000085230	lincRNA	Gm16013	ENSMUST00000152249	lincRNA		11	-1	71436180	353
ENSMUSG00000032744	protein_coding	Heyl	ENSMUST00000151870	processed_transcript		4	1	123233853	623
ENSMUSG00000047661	lincRNA	1600012P17Rik	ENSMUST00000162474	lincRNA		1	-1	158980071	532
ENSMUSG00000116403	processed_pseudogene	Gm19571	ENSMUST00000231026	processed_pseudogene		16	-1	12381502	373
ENSMUSG00000032782	protein_coding	Cntrob	ENSMUST00000135979	protein_coding		11	-1	69309442	334
ENSMUSG00000034634	protein_coding	Ly6d	ENSMUST00000040404	protein_coding	principal1	15	-1	74763620	744
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000152811	processed_transcript		11	-1	94473641	4878
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000113882	protein_coding	alternative1	X	-1	95166500	2445
ENSMUSG00000022803	protein_coding	Popdc2	ENSMUST00000114739	protein_coding	alternative2	16	1	38362245	1992
ENSMUSG00000032782	protein_coding	Cntrob	ENSMUST00000148490	retained_intron		11	-1	69315137	622
ENSMUSG00000032744	protein_coding	Heyl	ENSMUST00000127172	processed_transcript		4	1	123239757	374
ENSMUSG00000025982	protein_coding	Sf3b1	ENSMUST00000027127	protein_coding	principal1	1	-1	55027481	6195
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000197206	protein_coding		X	-1	95196856	2227
ENSMUSG00000032782	protein_coding	Cntrob	ENSMUST00000125777	retained_intron		11	-1	69320072	750
ENSMUSG00000116676	processed_pseudogene	Gm5768	ENSMUST00000231247	processed_pseudogene		16	1	16852315	1543
ENSMUSG00000111450	lincRNA	Gm33351	ENSMUST00000213352	lincRNA		11	-1	71574595	990
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000196354	protein_coding		X	-1	95081629	1146
ENSMUSG00000111450	lincRNA	Gm33351	ENSMUST00000215428	lincRNA		11	-1	71573538	1677
ENSMUSG00000022803	protein_coding	Popdc2	ENSMUST00000141189	processed_transcript		16	1	38368810	581
ENSMUSG00000032782	protein_coding	Cntrob	ENSMUST00000176111	retained_intron		11	-1	69319485	467
ENSMUSG00000022803	protein_coding	Popdc2	ENSMUST00000127892	processed_transcript		16	1	38369426	835
ENSMUSG00000025982	protein_coding	Sf3b1	ENSMUST00000190175	retained_intron		1	-1	54991115	3350
ENSMUSG00000015879	protein_coding	Fam184b	ENSMUST00000016023	protein_coding	principal1	5	-1	45639614	4236
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000199920	protein_coding		X	-1	95166373	1976
ENSMUSG00000072753	lincRNA	9230020A06Rik	ENSMUST00000215201	lincRNA		11	1	71512377	1116
ENSMUSG00000025982	protein_coding	Sf3b1	ENSMUST00000185429	retained_intron		1	-1	54992541	3589
ENSMUSG00000022803	protein_coding	Popdc2	ENSMUST00000146342	processed_transcript		16	1	38371998	356
ENSMUSG00000072753	lincRNA	9230020A06Rik	ENSMUST00000214621	lincRNA		11	1	71512528	1682
ENSMUSG00000020866	protein_coding	Cacna1g	ENSMUST00000021234	protein_coding	alternative2	11	-1	94474198	8139
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000182135	protein_coding		X	-1	95054947	399
ENSMUSG00000031375	protein_coding	Bgn	ENSMUST00000033741	protein_coding	principal1	X	1	73483602	2419
ENSMUSG00000072753	lincRNA	9230020A06Rik	ENSMUST00000151841	lincRNA		11	1	71516536	2051
ENSMUSG00000072753	lincRNA	9230020A06Rik	ENSMUST00000171420	lincRNA		11	1	71547765	582
ENSMUSG00000100183	sense_intronic	Gm28512	ENSMUST00000187415	sense_intronic		1	1	153750682	762
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000182137	protein_coding		X	-1	95058953	503
ENSMUSG00000031375	protein_coding	Bgn	ENSMUST00000141945	retained_intron		X	1	73483623	1473
ENSMUSG00000031375	protein_coding	Bgn	ENSMUST00000130873	retained_intron		X	1	73483633	2666
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000053913	protein_coding	principal1	5	-1	108660811	4938
ENSMUSG00000031375	protein_coding	Bgn	ENSMUST00000140803	retained_intron		X	1	73483639	1728
ENSMUSG00000100157	lincRNA	2310034O05Rik	ENSMUST00000185221	lincRNA		5	1	100210692	1107
ENSMUSG00000108573	TEC	Gm44986	ENSMUST00000206292	TEC		7	1	122096083	2829
ENSMUSG00000100157	lincRNA	2310034O05Rik	ENSMUST00000188902	lincRNA		5	1	100210708	508
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000113873	protein_coding		X	-1	95166307	2117
ENSMUSG00000025982	protein_coding	Sf3b1	ENSMUST00000187500	retained_intron		1	-1	55027464	3403
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000185367	retained_intron		1	1	143716338	3905
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000198753	protein_coding		X	-1	95165825	934
ENSMUSG00000083336	unprocessed_pseudogene	Olfr1332-ps1	ENSMUST00000119243	unprocessed_pseudogene		4	1	118854086	960
ENSMUSG00000097620	antisense	4921514A10Rik	ENSMUST00000187076	antisense		4	1	141115660	2116
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000200628	protein_coding		X	-1	95196452	766
ENSMUSG00000031375	protein_coding	Bgn	ENSMUST00000155231	processed_transcript		X	1	73492057	460
ENSMUSG00000097620	antisense	4921514A10Rik	ENSMUST00000181450	antisense		4	1	141115660	2114
ENSMUSG00000116013	processed_pseudogene	C87114	ENSMUST00000231050	processed_pseudogene		16	-1	12409177	895
ENSMUSG00000025982	protein_coding	Sf3b1	ENSMUST00000188859	retained_intron		1	-1	55015193	628
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000182562	protein_coding		X	-1	95166539	395
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000108531	protein_coding		11	-1	70969973	2453
ENSMUSG00000031375	protein_coding	Bgn	ENSMUST00000183174	processed_transcript		X	1	73494892	548
ENSMUSG00000025982	protein_coding	Sf3b1	ENSMUST00000191303	nonsense_mediated_decay		1	-1	55027394	600
ENSMUSG00000059669	protein_coding	Taf1b	ENSMUST00000075954	protein_coding	principal2	12	1	24498359	2209
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000123192	retained_intron		11	-1	70946362	2730
ENSMUSG00000058655	protein_coding	Eif4b	ENSMUST00000169681	protein_coding	principal1	15	1	102073773	3854
ENSMUSG00000025982	protein_coding	Sf3b1	ENSMUST00000189051	processed_transcript		1	-1	55027373	804
ENSMUSG00000025656	protein_coding	Arhgef9	ENSMUST00000196012	protein_coding		X	-1	95166438	797
ENSMUSG00000073769	protein_coding	Olfr1331	ENSMUST00000106360	protein_coding	principal2	4	1	118864649	3230
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000014174	protein_coding	principal1	4	-1	44710487	8004
ENSMUSG00000031375	protein_coding	Bgn	ENSMUST00000169489	protein_coding	principal1	X	1	73483635	1574
ENSMUSG00000025982	protein_coding	Sf3b1	ENSMUST00000188419	retained_intron		1	-1	55016929	711
ENSMUSG00000059669	protein_coding	Taf1b	ENSMUST00000222710	protein_coding	alternative2	12	1	24498611	521
ENSMUSG00000073769	protein_coding	Olfr1331	ENSMUST00000216589	protein_coding	alternative2	4	1	118864654	3139
ENSMUSG00000073769	protein_coding	Olfr1331	ENSMUST00000094831	protein_coding	principal2	4	1	118868783	954
ENSMUSG00000058655	protein_coding	Eif4b	ENSMUST00000229400	protein_coding		15	1	102073864	1548
ENSMUSG00000113817	transcribed_unprocessed_pseudogene	Gm21056	ENSMUST00000221636	processed_transcript		12	-1	101117214	4635
ENSMUSG00000113817	transcribed_unprocessed_pseudogene	Gm21056	ENSMUST00000223452	processed_transcript		12	-1	101117111	623
ENSMUSG00000113817	transcribed_unprocessed_pseudogene	Gm21056	ENSMUST00000223122	transcribed_unprocessed_pseudogene		12	-1	101105507	423
ENSMUSG00000058655	protein_coding	Eif4b	ENSMUST00000229122	retained_intron		15	1	102086024	583
ENSMUSG00000018604	protein_coding	Tbx3	ENSMUST00000121021	protein_coding	principal1	5	1	119670862	4777
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000143235	nonsense_mediated_decay		4	-1	44710418	1417
ENSMUSG00000058655	protein_coding	Eif4b	ENSMUST00000229254	retained_intron		15	1	102094564	437
ENSMUSG00000080054	processed_pseudogene	Rpl12-ps1	ENSMUST00000116168	processed_pseudogene		1	-1	36958427	498
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000107825	protein_coding		4	-1	44710418	1445
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000102932	protein_coding		4	-1	44710418	1460
ENSMUSG00000043410	protein_coding	Hfm1	ENSMUST00000148495	nonsense_mediated_decay		5	-1	106895327	2613
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000107827	protein_coding		4	-1	44710418	1315
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000107826	protein_coding		4	-1	44710418	1228
ENSMUSG00000087629	antisense	Gm12246	ENSMUST00000129126	antisense		11	1	58126068	503
ENSMUSG00000087116	lincRNA	Gm12324	ENSMUST00000130837	lincRNA		11	-1	71658477	3753
ENSMUSG00000059669	protein_coding	Taf1b	ENSMUST00000223503	retained_intron		12	1	24498629	1484
ENSMUSG00000111373	processed_pseudogene	Gm48818	ENSMUST00000215182	processed_pseudogene		11	-1	71697516	1246
ENSMUSG00000020986	protein_coding	Sec23a	ENSMUST00000021375	protein_coding	principal1	12	-1	59012017	4109
ENSMUSG00000040842	protein_coding	Szrd1	ENSMUST00000148204	protein_coding		4	-1	141139727	3202
ENSMUSG00000059669	protein_coding	Taf1b	ENSMUST00000221372	nonsense_mediated_decay		12	1	24498630	1840
ENSMUSG00000054932	protein_coding	Afp	ENSMUST00000042755	protein_coding	principal1	5	1	90490737	2063
ENSMUSG00000113692	processed_pseudogene	Gm47482	ENSMUST00000220562	processed_pseudogene		12	-1	24512839	166
ENSMUSG00000018604	protein_coding	Tbx3	ENSMUST00000018748	protein_coding		5	1	119671018	4856
ENSMUSG00000020986	protein_coding	Sec23a	ENSMUST00000165134	protein_coding		12	-1	59007235	2529
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000134968	protein_coding		4	-1	44710408	969
ENSMUSG00000109116	processed_pseudogene	Sycp1-ps1	ENSMUST00000207882	processed_pseudogene		7	1	18786332	2768
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000173821	protein_coding		4	-1	44710408	996
ENSMUSG00000115968	lincRNA	Gm38619	ENSMUST00000230298	lincRNA		16	1	12711317	263
ENSMUSG00000020986	protein_coding	Sec23a	ENSMUST00000154399	retained_intron		12	-1	58971271	619
ENSMUSG00000054932	protein_coding	Afp	ENSMUST00000200693	protein_coding		5	1	90490739	405
ENSMUSG00000101565	lincRNA	1700003L19Rik	ENSMUST00000231680	lincRNA		16	1	12800579	574
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000035283	protein_coding		11	-1	70969962	2450
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000174319	protein_coding		4	-1	44710408	830
ENSMUSG00000018604	protein_coding	Tbx3	ENSMUST00000145647	retained_intron		5	1	119675445	725
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000173733	protein_coding		4	-1	44710408	885
ENSMUSG00000054932	protein_coding	Afp	ENSMUST00000201061	retained_intron		5	1	90491238	773
ENSMUSG00000037994	protein_coding	Slc9b2	ENSMUST00000145195	nonsense_mediated_decay		3	1	135307700	1562
ENSMUSG00000018604	protein_coding	Tbx3	ENSMUST00000154680	processed_transcript		5	1	119680249	485
ENSMUSG00000020986	protein_coding	Sec23a	ENSMUST00000169976	retained_intron		12	-1	58982704	370
ENSMUSG00000081080	transcribed_unprocessed_pseudogene	Vmn1r-ps102	ENSMUST00000120663	transcribed_unprocessed_pseudogene		13	1	22385649	886
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000172866	protein_coding		4	-1	44710408	1019
ENSMUSG00000023216	protein_coding	Epb42	ENSMUST00000102490	protein_coding	principal1	2	-1	121037072	4115
ENSMUSG00000096770	protein_coding	Amy2a4	ENSMUST00000179568	protein_coding	principal1	3	-1	113291449	3717
ENSMUSG00000020986	protein_coding	Sec23a	ENSMUST00000134223	retained_intron		12	-1	59012017	754
ENSMUSG00000054932	protein_coding	Afp	ENSMUST00000200728	retained_intron		5	1	90501531	687
ENSMUSG00000069292	protein_coding	Vmn1r199	ENSMUST00000227685	protein_coding	principal2	13	1	22379818	5713
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000174242	nonsense_mediated_decay		4	-1	44710408	1112
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000165417	protein_coding		4	-1	44710408	1056
ENSMUSG00000069292	protein_coding	Vmn1r199	ENSMUST00000227689	protein_coding	alternative2	13	1	22379818	5537
ENSMUSG00000054932	protein_coding	Afp	ENSMUST00000202209	retained_intron		5	1	90507431	691
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000194075	protein_coding		4	-1	44645723	631
ENSMUSG00000069292	protein_coding	Vmn1r199	ENSMUST00000227846	protein_coding	alternative2	13	1	22379818	5523
ENSMUSG00000023216	protein_coding	Epb42	ENSMUST00000023987	protein_coding		2	-1	121036835	2695
ENSMUSG00000069292	protein_coding	Vmn1r199	ENSMUST00000091732	protein_coding	principal2	13	1	22382538	1104
ENSMUSG00000036192	protein_coding	Rorb	ENSMUST00000040153	protein_coding		19	-1	19001117	8759
ENSMUSG00000101565	lincRNA	1700003L19Rik	ENSMUST00000190074	lincRNA		16	1	12811390	746
ENSMUSG00000018604	protein_coding	Tbx3	ENSMUST00000079719	protein_coding	principal1	5	1	119670669	4982
ENSMUSG00000022901	protein_coding	Cd86	ENSMUST00000089620	protein_coding	principal1	16	-1	36666077	2539
ENSMUSG00000095569	protein_coding	Taar7d	ENSMUST00000092657	protein_coding	principal1	10	1	24027222	1077
ENSMUSG00000037994	protein_coding	Slc9b2	ENSMUST00000126034	retained_intron		3	1	135307731	1081
ENSMUSG00000036192	protein_coding	Rorb	ENSMUST00000112832	protein_coding	principal1	19	-1	19111196	9293
ENSMUSG00000040842	protein_coding	Szrd1	ENSMUST00000102487	protein_coding	principal1	4	-1	141139766	3244
ENSMUSG00000022901	protein_coding	Cd86	ENSMUST00000154485	processed_transcript		16	-1	36604519	548
ENSMUSG00000116520	lincRNA	4930414F18Rik	ENSMUST00000230696	lincRNA		16	-1	12945935	2188
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000172949	processed_transcript		4	-1	44683815	758
ENSMUSG00000022901	protein_coding	Cd86	ENSMUST00000135280	processed_transcript		16	-1	36642805	654
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000146335	protein_coding		4	-1	44704006	1194
ENSMUSG00000116197	lincRNA	Gm38619	ENSMUST00000230690	lincRNA		16	1	12704368	1343
ENSMUSG00000087516	antisense	Tbx3os1	ENSMUST00000201466	antisense		5	-1	119574946	969
ENSMUSG00000037994	protein_coding	Slc9b2	ENSMUST00000149655	protein_coding		3	1	135307742	356
ENSMUSG00000093931	protein_coding	Amy2a3	ENSMUST00000179314	protein_coding	principal1	3	-1	113324052	3717
ENSMUSG00000022901	protein_coding	Cd86	ENSMUST00000145506	processed_transcript		16	-1	36666081	975
ENSMUSG00000091416	processed_pseudogene	Gm6327	ENSMUST00000171185	processed_pseudogene		16	-1	12761366	1335
ENSMUSG00000087516	antisense	Tbx3os1	ENSMUST00000202307	antisense		5	-1	119627305	1787
ENSMUSG00000056215	protein_coding	Lrguk	ENSMUST00000228187	protein_coding	alternative2	6	1	34029448	10475
ENSMUSG00000092054	transcribed_processed_pseudogene	Kif4-ps	ENSMUST00000184686	transcribed_processed_pseudogene		12	1	101145614	3665
ENSMUSG00000092054	transcribed_processed_pseudogene	Kif4-ps	ENSMUST00000185083	processed_transcript		12	1	101149107	652
ENSMUSG00000036192	protein_coding	Rorb	ENSMUST00000112828	protein_coding		19	-1	19001117	2854
ENSMUSG00000023216	protein_coding	Epb42	ENSMUST00000124703	processed_transcript		2	-1	121027260	2513
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000108530	protein_coding	principal1	11	-1	70969954	2389
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000187197	processed_transcript		4	-1	44703413	421
ENSMUSG00000087516	antisense	Tbx3os1	ENSMUST00000200851	antisense		5	-1	119570762	396
ENSMUSG00000023216	protein_coding	Epb42	ENSMUST00000147444	processed_transcript		2	-1	121022806	1752
ENSMUSG00000085659	lincRNA	Gm12325	ENSMUST00000135553	lincRNA		11	-1	71704344	320
ENSMUSG00000073530	protein_coding	Pappa2	ENSMUST00000159861	protein_coding	principal1	1	-1	158958367	9518
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000186542	protein_coding		4	-1	44703413	324
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000174761	processed_transcript		4	-1	44703413	356
ENSMUSG00000014030	protein_coding	Pax5	ENSMUST00000191036	processed_transcript		4	-1	44703413	223
ENSMUSG00000024579	protein_coding	Pcyox1l	ENSMUST00000025472	protein_coding	principal1	18	-1	61707635	2017
ENSMUSG00000036192	protein_coding	Rorb	ENSMUST00000149635	retained_intron		19	-1	19001100	2396
ENSMUSG00000023216	protein_coding	Epb42	ENSMUST00000152217	processed_transcript		2	-1	121036745	680
ENSMUSG00000024579	protein_coding	Pcyox1l	ENSMUST00000195229	nonsense_mediated_decay		18	-1	61707613	581
ENSMUSG00000073530	protein_coding	Pappa2	ENSMUST00000161589	protein_coding		1	-1	158814469	739
ENSMUSG00000023216	protein_coding	Epb42	ENSMUST00000128360	processed_transcript		2	-1	121036681	366
ENSMUSG00000036192	protein_coding	Rorb	ENSMUST00000147907	retained_intron		19	-1	19001111	2336
ENSMUSG00000085915	unprocessed_pseudogene	Gm8091	ENSMUST00000150506	unprocessed_pseudogene		5	-1	100355119	886
ENSMUSG00000086211	antisense	Gm12462	ENSMUST00000140826	antisense		4	1	44664415	3056
ENSMUSG00000028089	protein_coding	Chd1l	ENSMUST00000029730	protein_coding	principal1	3	-1	97610203	3008
ENSMUSG00000102880	TEC	4930517J16Rik	ENSMUST00000193095	TEC		4	1	44669330	1568
ENSMUSG00000023216	protein_coding	Epb42	ENSMUST00000145812	retained_intron		2	-1	121022016	625
ENSMUSG00000087516	antisense	Tbx3os1	ENSMUST00000134493	antisense		5	-1	119627382	1008
ENSMUSG00000024579	protein_coding	Pcyox1l	ENSMUST00000154763	retained_intron		18	-1	61707635	977
ENSMUSG00000087516	antisense	Tbx3os1	ENSMUST00000140101	antisense		5	-1	119627593	490
ENSMUSG00000073768	protein_coding	Olfr1330	ENSMUST00000216386	processed_transcript		4	1	118888597	3053
ENSMUSG00000028089	protein_coding	Chd1l	ENSMUST00000195962	retained_intron		3	-1	97567112	501
ENSMUSG00000118100	processed_transcript	Gm50340	ENSMUST00000235986	bidirectional_promoter_lncRNA		19	1	9899690	582
ENSMUSG00000073768	protein_coding	Olfr1330	ENSMUST00000106361	protein_coding	principal1	4	1	118888609	1419
ENSMUSG00000118100	processed_transcript	Gm50340	ENSMUST00000235814	bidirectional_promoter_lncRNA		19	1	9899694	472
ENSMUSG00000073768	protein_coding	Olfr1330	ENSMUST00000215186	processed_transcript		4	1	118888609	5810
ENSMUSG00000085057	processed_transcript	Gm13415	ENSMUST00000135829	antisense		2	1	24440418	565
ENSMUSG00000087516	antisense	Tbx3os1	ENSMUST00000129108	antisense		5	-1	119671365	282
ENSMUSG00000118100	processed_transcript	Gm50340	ENSMUST00000235252	retained_intron		19	1	9899935	330
ENSMUSG00000030869	protein_coding	Ndufab1	ENSMUST00000033157	protein_coding	principal1	7	-1	122101886	3479
ENSMUSG00000073530	protein_coding	Pappa2	ENSMUST00000159860	retained_intron		1	-1	158845032	872
ENSMUSG00000073530	protein_coding	Pappa2	ENSMUST00000160206	processed_transcript		1	-1	158838559	439
ENSMUSG00000056215	protein_coding	Lrguk	ENSMUST00000070189	protein_coding	principal2	6	1	34029448	3058
ENSMUSG00000118008	lincRNA	Gm36913	ENSMUST00000236750	lincRNA		19	-1	9928534	316
ENSMUSG00000085057	processed_transcript	Gm13415	ENSMUST00000131886	antisense		2	1	24442835	3089
ENSMUSG00000073530	protein_coding	Pappa2	ENSMUST00000177789	processed_transcript		1	-1	158960381	545
ENSMUSG00000030869	protein_coding	Ndufab1	ENSMUST00000146964	retained_intron		7	-1	122091787	351
ENSMUSG00000073768	protein_coding	Olfr1330	ENSMUST00000105035	protein_coding	principal1	4	1	118888613	1027
ENSMUSG00000085057	processed_transcript	Gm13415	ENSMUST00000187034	retained_intron		2	1	24442849	2416
ENSMUSG00000021051	protein_coding	Ppp2r5e	ENSMUST00000021447	protein_coding	principal1	12	-1	75596200	4810
ENSMUSG00000099120	transcribed_processed_pseudogene	Gm27193	ENSMUST00000184217	transcribed_processed_pseudogene		2	1	24483495	586
ENSMUSG00000073768	protein_coding	Olfr1330	ENSMUST00000094830	protein_coding	principal1	4	1	118893085	948
ENSMUSG00000118065	processed_pseudogene	Gm50343	ENSMUST00000236688	processed_pseudogene		19	1	9937669	165
ENSMUSG00000028089	protein_coding	Chd1l	ENSMUST00000197304	retained_intron		3	-1	97610192	2941
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000178253	nonsense_mediated_decay		11	-1	70969880	2581
ENSMUSG00000056215	protein_coding	Lrguk	ENSMUST00000101564	protein_coding		6	1	34029450	967
ENSMUSG00000115737	transcribed_processed_pseudogene	Rpl19-ps3	ENSMUST00000227409	processed_transcript		14	-1	49122702	1279
ENSMUSG00000030869	protein_coding	Ndufab1	ENSMUST00000123296	protein_coding	principal1	7	-1	122101851	1416
ENSMUSG00000118183	TEC	Gm50345	ENSMUST00000237803	TEC		19	1	9939266	1387
ENSMUSG00000115737	transcribed_processed_pseudogene	Rpl19-ps3	ENSMUST00000226439	processed_transcript		14	-1	49122712	1758
ENSMUSG00000115737	transcribed_processed_pseudogene	Rpl19-ps3	ENSMUST00000227008	transcribed_processed_pseudogene		14	-1	49112798	589
ENSMUSG00000021051	protein_coding	Ppp2r5e	ENSMUST00000220035	protein_coding		12	-1	75596245	3135
ENSMUSG00000056215	protein_coding	Lrguk	ENSMUST00000141078	protein_coding		6	1	34039308	540
ENSMUSG00000118123	TEC	Gm50346	ENSMUST00000237966	TEC		19	-1	9942832	1484
ENSMUSG00000085251	lincRNA	Gm12326	ENSMUST00000132986	lincRNA		11	-1	71740466	618
ENSMUSG00000066800	protein_coding	Rnasel	ENSMUST00000086209	protein_coding	principal1	1	1	153749426	2938
ENSMUSG00000113325	processed_pseudogene	Gm48080	ENSMUST00000220624	processed_pseudogene		12	-1	28886382	153
ENSMUSG00000085251	lincRNA	Gm12326	ENSMUST00000152957	lincRNA		11	-1	71740447	317
ENSMUSG00000040842	protein_coding	Szrd1	ENSMUST00000094549	processed_transcript		4	-1	141139775	3203
ENSMUSG00000098167	processed_pseudogene	Gm18848	ENSMUST00000182069	processed_pseudogene		12	1	101205723	792
ENSMUSG00000073530	protein_coding	Pappa2	ENSMUST00000159892	processed_transcript		1	-1	158980490	578
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000141179	retained_intron		11	-1	70945100	649
ENSMUSG00000066800	protein_coding	Rnasel	ENSMUST00000182722	protein_coding		1	1	153749504	2371
ENSMUSG00000042644	protein_coding	Itpr3	ENSMUST00000049308	protein_coding	principal1	17	1	27057304	8990
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000128193	retained_intron		11	-1	70944488	437
ENSMUSG00000117310	protein_coding	Ptp4a1	ENSMUST00000233506	protein_coding		1	-1	30949770	4145
ENSMUSG00000021051	protein_coding	Ppp2r5e	ENSMUST00000218012	nonsense_mediated_decay		12	-1	75596245	1725
ENSMUSG00000096705	protein_coding	Olfr1329	ENSMUST00000071979	protein_coding	principal1	4	-1	118917465	942
ENSMUSG00000113387	lincRNA	Gm31508	ENSMUST00000221643	lincRNA		12	1	28910229	3728
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000133188	retained_intron		11	-1	70944737	433
ENSMUSG00000030869	protein_coding	Ndufab1	ENSMUST00000130857	retained_intron		7	-1	122093092	1653
ENSMUSG00000040842	protein_coding	Szrd1	ENSMUST00000039939	processed_transcript		4	-1	141139775	3200
ENSMUSG00000021051	protein_coding	Ppp2r5e	ENSMUST00000218716	protein_coding		12	-1	75549674	282
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000123917	retained_intron		11	-1	70945034	516
ENSMUSG00000030830	protein_coding	Itgal	ENSMUST00000117762	protein_coding	alternative2	7	1	127296260	5222
ENSMUSG00000042644	protein_coding	Itpr3	ENSMUST00000235521	processed_transcript		17	1	27106177	350
ENSMUSG00000021051	protein_coding	Ppp2r5e	ENSMUST00000218930	retained_intron		12	-1	75596228	1382
ENSMUSG00000037994	protein_coding	Slc9b2	ENSMUST00000051849	protein_coding	principal1	3	1	135307745	4818
ENSMUSG00000040842	protein_coding	Szrd1	ENSMUST00000128444	processed_transcript		4	-1	141139740	428
ENSMUSG00000030869	protein_coding	Ndufab1	ENSMUST00000106471	protein_coding		7	-1	122101736	552
ENSMUSG00000112254	TEC	Gm47690	ENSMUST00000218033	TEC		12	-1	75508745	2946
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000129615	retained_intron		11	-1	70948815	1793
ENSMUSG00000101896	processed_pseudogene	Gm6244	ENSMUST00000178732	processed_pseudogene		1	-1	83212884	841
ENSMUSG00000038375	protein_coding	Trp53inp2	ENSMUST00000151466	protein_coding		2	1	155381059	486
ENSMUSG00000030869	protein_coding	Ndufab1	ENSMUST00000130904	retained_intron		7	-1	122093782	397
ENSMUSG00000112459	antisense	Gm47689	ENSMUST00000219909	antisense		12	1	75579865	547
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000237602	protein_coding	principal2	18	1	42511487	4417
ENSMUSG00000086898	antisense	Itpr3os	ENSMUST00000143605	antisense		17	-1	27101440	794
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000138634	retained_intron		11	-1	70969961	1976
ENSMUSG00000115815	processed_pseudogene	Gm8328	ENSMUST00000226382	processed_pseudogene		15	-1	19066569	419
ENSMUSG00000047798	protein_coding	Cd300lf	ENSMUST00000106561	protein_coding	alternative2	11	-1	115133992	1885
ENSMUSG00000030869	protein_coding	Ndufab1	ENSMUST00000139456	protein_coding		7	-1	122101735	452
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000178369	retained_intron		11	-1	70956462	515
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000145969	protein_coding	alternative2	1	1	143739029	924
ENSMUSG00000037994	protein_coding	Slc9b2	ENSMUST00000132405	retained_intron		3	1	135330306	1242
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000180225	retained_intron		11	-1	70956913	1755
ENSMUSG00000093817	lincRNA	Gm2101	ENSMUST00000156730	lincRNA		X	1	27658223	677
ENSMUSG00000040667	protein_coding	Nup88	ENSMUST00000145336	retained_intron		11	-1	70961791	507
ENSMUSG00000117310	protein_coding	Ptp4a1	ENSMUST00000076587	protein_coding		1	-1	30949757	2851
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000236088	protein_coding		18	1	42511499	2365
ENSMUSG00000115803	lincRNA	Gm35496	ENSMUST00000226343	lincRNA		15	1	19185373	1059
ENSMUSG00000117310	protein_coding	Ptp4a1	ENSMUST00000238874	protein_coding		1	-1	30949691	108
ENSMUSG00000066800	protein_coding	Rnasel	ENSMUST00000183241	protein_coding		1	1	153751952	2339
ENSMUSG00000084139	processed_pseudogene	Gm12322	ENSMUST00000121605	processed_pseudogene		11	-1	70909645	389
ENSMUSG00000024440	protein_coding	Pcdh12	ENSMUST00000025311	protein_coding	principal1	18	-1	38284357	5546
ENSMUSG00000093817	lincRNA	Gm2101	ENSMUST00000131997	lincRNA		X	1	27658246	764
ENSMUSG00000030869	protein_coding	Ndufab1	ENSMUST00000153173	retained_intron		7	-1	122101706	755
ENSMUSG00000093817	lincRNA	Gm2101	ENSMUST00000128191	lincRNA		X	1	27658161	397
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000126514	processed_transcript		1	1	143739557	407
ENSMUSG00000081968	processed_pseudogene	Rpl23a-ps2	ENSMUST00000119375	processed_pseudogene		11	1	70879428	474
ENSMUSG00000047798	protein_coding	Cd300lf	ENSMUST00000146254	processed_transcript		11	-1	115133991	3929
ENSMUSG00000030869	protein_coding	Ndufab1	ENSMUST00000145863	processed_transcript		7	-1	122101347	261
ENSMUSG00000066800	protein_coding	Rnasel	ENSMUST00000182131	retained_intron		1	1	153751968	4150
ENSMUSG00000093817	lincRNA	Gm2101	ENSMUST00000133794	lincRNA		X	1	27658190	1846
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000025375	protein_coding	alternative2	18	1	42511501	4101
ENSMUSG00000093817	lincRNA	Gm2101	ENSMUST00000137421	lincRNA		X	1	27658190	1118
ENSMUSG00000030869	protein_coding	Ndufab1	ENSMUST00000146022	retained_intron		7	-1	122101828	443
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000173642	nonsense_mediated_decay		18	1	42511523	3526
ENSMUSG00000090936	lincRNA	Gm17705	ENSMUST00000172285	lincRNA		17	1	35165119	1555
ENSMUSG00000094424	unprocessed_pseudogene	Gm7386	ENSMUST00000178020	unprocessed_pseudogene		X	1	27771601	639
ENSMUSG00000036123	protein_coding	Slc9a3	ENSMUST00000221410	processed_transcript		13	1	74121457	578
ENSMUSG00000047798	protein_coding	Cd300lf	ENSMUST00000051264	protein_coding	principal3	11	-1	115133992	1864
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000237390	protein_coding		18	1	42523939	850
ENSMUSG00000117310	protein_coding	Ptp4a1	ENSMUST00000027232	protein_coding	principal1	1	-1	30949755	4129
ENSMUSG00000066800	protein_coding	Rnasel	ENSMUST00000182538	protein_coding		1	1	153752852	2761
ENSMUSG00000038375	protein_coding	Trp53inp2	ENSMUST00000043237	protein_coding	principal1	2	1	155381814	3979
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000236418	protein_coding		18	1	42536293	579
ENSMUSG00000047798	protein_coding	Cd300lf	ENSMUST00000106562	protein_coding		11	-1	115133992	1762
ENSMUSG00000043410	protein_coding	Hfm1	ENSMUST00000117588	protein_coding	principal1	5	-1	106926321	4870
ENSMUSG00000043410	protein_coding	Hfm1	ENSMUST00000155171	protein_coding		5	-1	106889922	1928
ENSMUSG00000066800	protein_coding	Rnasel	ENSMUST00000182016	processed_transcript		1	1	153755984	324
ENSMUSG00000026064	protein_coding	Ptp4a1	ENSMUST00000232841	protein_coding	principal1	1	-1	30949309	4236
ENSMUSG00000030830	protein_coding	Itgal	ENSMUST00000106306	protein_coding	principal4	7	1	127296291	5195
ENSMUSG00000024440	protein_coding	Pcdh12	ENSMUST00000195747	retained_intron		18	-1	38277959	2407
ENSMUSG00000082985	processed_pseudogene	Gm14042	ENSMUST00000120139	processed_pseudogene		2	1	130400437	833
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000236446	retained_intron		18	1	42536336	561
ENSMUSG00000115735	lincRNA	Gm49180	ENSMUST00000228441	lincRNA		14	-1	45102094	334
ENSMUSG00000024440	protein_coding	Pcdh12	ENSMUST00000194012	protein_coding		18	-1	38284402	2702
ENSMUSG00000030830	protein_coding	Itgal	ENSMUST00000120857	protein_coding	alternative2	7	1	127296315	4533
ENSMUSG00000114974	processed_pseudogene	Gm21010	ENSMUST00000228799	processed_pseudogene		14	1	45090615	1286
ENSMUSG00000038375	protein_coding	Trp53inp2	ENSMUST00000174685	protein_coding		2	1	155381840	740
ENSMUSG00000024440	protein_coding	Pcdh12	ENSMUST00000193123	retained_intron		18	-1	38284399	3645
ENSMUSG00000115814	unprocessed_pseudogene	Gm49181	ENSMUST00000227286	unprocessed_pseudogene		14	-1	45114112	409
ENSMUSG00000030830	protein_coding	Itgal	ENSMUST00000205695	processed_transcript		7	1	127297430	330
ENSMUSG00000055296	protein_coding	Tmem245	ENSMUST00000068792	protein_coding	alternative2	4	-1	56947437	15981
ENSMUSG00000038375	protein_coding	Trp53inp2	ENSMUST00000173406	retained_intron		2	1	155381860	825
ENSMUSG00000115216	unprocessed_pseudogene	Gm49183	ENSMUST00000228403	unprocessed_pseudogene		14	-1	45114708	308
ENSMUSG00000030830	protein_coding	Itgal	ENSMUST00000118405	protein_coding		7	1	127309518	3909
ENSMUSG00000026064	protein_coding	Ptp4a1	ENSMUST00000153681	retained_intron		1	-1	30946426	3072
ENSMUSG00000115054	processed_pseudogene	Gm49184	ENSMUST00000228126	processed_pseudogene		14	1	45130034	351
ENSMUSG00000043410	protein_coding	Hfm1	ENSMUST00000148686	nonsense_mediated_decay		5	-1	106925890	1440
ENSMUSG00000026064	protein_coding	Ptp4a1	ENSMUST00000130934	retained_intron		1	-1	30944304	476
ENSMUSG00000038375	protein_coding	Trp53inp2	ENSMUST00000134218	protein_coding		2	1	155382202	991
ENSMUSG00000070531	protein_coding	Wfdc6b	ENSMUST00000094346	protein_coding	principal1	2	1	164613522	984
ENSMUSG00000043410	protein_coding	Hfm1	ENSMUST00000134292	retained_intron		5	-1	106926258	1959
ENSMUSG00000043410	protein_coding	Hfm1	ENSMUST00000200249	protein_coding		5	-1	106925852	1381
ENSMUSG00000030830	protein_coding	Itgal	ENSMUST00000170971	protein_coding	alternative2	7	1	127296410	3662
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000237646	nonsense_mediated_decay		18	1	42552508	724
ENSMUSG00000043410	protein_coding	Hfm1	ENSMUST00000112690	protein_coding	principal1	5	-1	106925890	5018
ENSMUSG00000070552	protein_coding	Mrgprx1	ENSMUST00000094390	protein_coding	principal1	7	-1	48027597	1180
ENSMUSG00000067047	unprocessed_pseudogene	Olfr719-ps	ENSMUST00000137795	unprocessed_pseudogene		5	1	106906729	252
ENSMUSG00000115097	antisense	Gm49150	ENSMUST00000228623	antisense		14	1	47276370	344
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000236856	retained_intron		18	1	42552842	1082
ENSMUSG00000101063	unprocessed_pseudogene	Mrgprb7-ps	ENSMUST00000190238	unprocessed_pseudogene		7	-1	48064830	964
ENSMUSG00000115849	TEC	Gm49149	ENSMUST00000228742	TEC		14	-1	47262186	355
ENSMUSG00000072672	protein_coding	Duxbl3	ENSMUST00000173423	processed_transcript		14	1	26257962	365
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000237901	retained_intron		18	1	42553382	3373
ENSMUSG00000082145	processed_pseudogene	Gm12312	ENSMUST00000120351	processed_pseudogene		11	1	70358138	644
ENSMUSG00000024498	protein_coding	Tcerg1	ENSMUST00000237162	retained_intron		18	1	42571810	567
ENSMUSG00000095293	protein_coding	Gm10058	ENSMUST00000079797	protein_coding	principal1	X	-1	27946885	893
ENSMUSG00000055296	protein_coding	Tmem245	ENSMUST00000155625	processed_transcript		4	-1	56947424	3576
ENSMUSG00000055296	protein_coding	Tmem245	ENSMUST00000132816	protein_coding		4	-1	56923458	1787
ENSMUSG00000075370	protein_coding	Igll1	ENSMUST00000100136	protein_coding	principal1	16	-1	16863985	870
ENSMUSG00000036123	protein_coding	Slc9a3	ENSMUST00000225423	protein_coding	alternative2	13	1	74121515	2589
ENSMUSG00000055296	protein_coding	Tmem245	ENSMUST00000125082	processed_transcript		4	-1	56937897	2436
ENSMUSG00000095293	protein_coding	Gm10058	ENSMUST00000178152	protein_coding	principal1	X	-1	27945297	639
ENSMUSG00000055296	protein_coding	Tmem245	ENSMUST00000107609	protein_coding	principal2	4	-1	56947411	2643
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000185362	protein_coding	principal4	1	1	143739557	3337
ENSMUSG00000091313	processed_pseudogene	Fth-ps2	ENSMUST00000168364	processed_pseudogene		6	-1	39653965	516
ENSMUSG00000021009	protein_coding	Ptpn21	ENSMUST00000170188	protein_coding	principal1	12	-1	98737405	5562
ENSMUSG00000032009	protein_coding	Sesn3	ENSMUST00000209187	protein_coding		9	1	14275067	1700
ENSMUSG00000029865	protein_coding	Sval1	ENSMUST00000031898	protein_coding	principal1	6	1	41951630	615
ENSMUSG00000036123	protein_coding	Slc9a3	ENSMUST00000221703	protein_coding	alternative2	13	1	74121515	5118
ENSMUSG00000075370	protein_coding	Igll1	ENSMUST00000231439	retained_intron		16	-1	16863985	2161
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000148600	retained_intron		1	1	143739566	1651
ENSMUSG00000036123	protein_coding	Slc9a3	ENSMUST00000036208	protein_coding	principal2	13	1	74121515	2490
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000149103	processed_transcript		1	1	143739610	414
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000111957	protein_coding	alternative2	1	1	143739615	580
ENSMUSG00000020284	protein_coding	Cfap410	ENSMUST00000105397	protein_coding	principal2	10	1	77978524	1818
ENSMUSG00000032009	protein_coding	Sesn3	ENSMUST00000034507	protein_coding		9	1	14275083	1827
ENSMUSG00000002416	protein_coding	Ndufb2	ENSMUST00000135671	protein_coding	principal1	6	1	39592574	4371
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000145571	protein_coding		1	1	143739618	758
ENSMUSG00000032009	protein_coding	Sesn3	ENSMUST00000209106	processed_transcript		9	1	14276301	505
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000050491	nonsense_mediated_decay		1	1	143739646	1199
ENSMUSG00000021009	protein_coding	Ptpn21	ENSMUST00000223321	retained_intron		12	-1	98683750	2957
ENSMUSG00000021492	protein_coding	F12	ENSMUST00000021948	protein_coding	principal1	13	-1	55426793	1960
ENSMUSG00000085534	lincRNA	Gm2117	ENSMUST00000151687	lincRNA		X	1	28005113	677
ENSMUSG00000002416	protein_coding	Ndufb2	ENSMUST00000119379	protein_coding	principal1	6	1	39592583	455
ENSMUSG00000085534	lincRNA	Gm2117	ENSMUST00000130478	lincRNA		X	1	28005136	764
ENSMUSG00000085534	lincRNA	Gm2117	ENSMUST00000142032	lincRNA		X	1	28005050	398
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000129653	protein_coding	alternative2	1	1	143740375	3515
ENSMUSG00000048142	protein_coding	Nat8l	ENSMUST00000056355	protein_coding	principal1	5	1	33995984	6529
ENSMUSG00000021492	protein_coding	F12	ENSMUST00000170921	protein_coding		13	-1	55426779	478
ENSMUSG00000085534	lincRNA	Gm2117	ENSMUST00000147993	lincRNA		X	1	28005080	1846
ENSMUSG00000072672	protein_coding	Duxbl3	ENSMUST00000112340	protein_coding		14	1	26258468	2248
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000174846	processed_transcript		1	1	87326998	995
ENSMUSG00000095494	unprocessed_pseudogene	Gm7391	ENSMUST00000178680	unprocessed_pseudogene		X	1	28127898	639
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000190211	retained_intron		1	1	143743415	2250
ENSMUSG00000048142	protein_coding	Nat8l	ENSMUST00000201041	processed_transcript		5	1	33999763	205
ENSMUSG00000002416	protein_coding	Ndufb2	ENSMUST00000002490	processed_transcript		6	1	39592585	491
ENSMUSG00000070533	protein_coding	Wfdc8	ENSMUST00000094351	protein_coding	alternative2	2	-1	164613626	1530
ENSMUSG00000021009	protein_coding	Ptpn21	ENSMUST00000085116	protein_coding	principal1	12	-1	98734645	5696
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000188783	retained_intron		1	1	143744983	420
ENSMUSG00000002416	protein_coding	Ndufb2	ENSMUST00000146793	retained_intron		6	1	39592588	422
ENSMUSG00000020745	protein_coding	Pafah1b1	ENSMUST00000126341	retained_intron		11	-1	74724335	8570
ENSMUSG00000070533	protein_coding	Wfdc8	ENSMUST00000109339	protein_coding	alternative2	2	-1	164613386	3227
ENSMUSG00000002416	protein_coding	Ndufb2	ENSMUST00000128064	retained_intron		6	1	39597264	1110
ENSMUSG00000020284	protein_coding	Cfap410	ENSMUST00000149074	retained_intron		10	1	77978654	2238
ENSMUSG00000002416	protein_coding	Ndufb2	ENSMUST00000135239	processed_transcript		6	1	39601781	653
ENSMUSG00000018196	protein_coding	Glrx2	ENSMUST00000152435	processed_transcript		1	1	143745971	392
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000031367	protein_coding	principal1	5	-1	127617416	2732
ENSMUSG00000021009	protein_coding	Ptpn21	ENSMUST00000221148	nonsense_mediated_decay		12	-1	98733913	3777
ENSMUSG00000020284	protein_coding	Cfap410	ENSMUST00000123999	retained_intron		10	1	77978671	4492
ENSMUSG00000086582	antisense	Gm16272	ENSMUST00000128218	antisense		6	-1	39592784	388
ENSMUSG00000020284	protein_coding	Cfap410	ENSMUST00000105398	protein_coding	alternative2	10	1	77978673	899
ENSMUSG00000072672	protein_coding	Duxbl3	ENSMUST00000172517	protein_coding		14	1	26258786	956
ENSMUSG00000070533	protein_coding	Wfdc8	ENSMUST00000109338	protein_coding	principal3	2	-1	164613626	1794
ENSMUSG00000021009	protein_coding	Ptpn21	ENSMUST00000221535	nonsense_mediated_decay		12	-1	98733813	2215
ENSMUSG00000020284	protein_coding	Cfap410	ENSMUST00000136275	retained_intron		10	1	77978681	6282
ENSMUSG00000021009	protein_coding	Ptpn21	ENSMUST00000221932	protein_coding		12	-1	98735343	3043
ENSMUSG00000107071	protein_coding	Gm42420	ENSMUST00000126621	nonsense_mediated_decay	principal1	6	1	39585753	634
ENSMUSG00000072672	protein_coding	Duxbl3	ENSMUST00000174494	protein_coding		14	1	26259109	871
ENSMUSG00000020284	protein_coding	Cfap410	ENSMUST00000130949	processed_transcript		10	1	77978693	410
ENSMUSG00000018821	protein_coding	Avpi1	ENSMUST00000018965	protein_coding	principal1	19	-1	42129059	1044
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000076069	protein_coding	principal1	5	-1	113080667	816
ENSMUSG00000032009	protein_coding	Sesn3	ENSMUST00000208222	protein_coding	principal1	9	1	14276301	9125
ENSMUSG00000020284	protein_coding	Cfap410	ENSMUST00000116237	processed_transcript		10	1	77980493	655
ENSMUSG00000072672	protein_coding	Duxbl3	ENSMUST00000173017	processed_transcript		14	1	26259758	486
ENSMUSG00000021009	protein_coding	Ptpn21	ENSMUST00000222071	retained_intron		12	-1	98734645	2341
ENSMUSG00000020284	protein_coding	Cfap410	ENSMUST00000129277	processed_transcript		10	1	77981762	214
ENSMUSG00000102124	lincRNA	Gm29296	ENSMUST00000188146	lincRNA		7	-1	51772726	320
ENSMUSG00000096569	protein_coding	Amy2a2	ENSMUST00000098667	protein_coding	principal1	3	-1	113356658	3717
ENSMUSG00000032009	protein_coding	Sesn3	ENSMUST00000207207	retained_intron		9	1	14314562	714
ENSMUSG00000025413	protein_coding	Ttc4	ENSMUST00000026480	protein_coding	principal2	4	-1	106678944	2121
ENSMUSG00000018821	protein_coding	Avpi1	ENSMUST00000161873	protein_coding		19	-1	42128989	559
ENSMUSG00000108842	TEC	Gm45001	ENSMUST00000208279	TEC		7	1	51850304	2515
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000124569	nonsense_mediated_decay		5	-1	127617226	2370
ENSMUSG00000032009	protein_coding	Sesn3	ENSMUST00000209145	retained_intron		9	1	14315236	4178
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000153238	nonsense_mediated_decay		5	-1	108660811	4801
ENSMUSG00000032009	protein_coding	Sesn3	ENSMUST00000208142	retained_intron		9	1	14321655	1915
ENSMUSG00000087127	lincRNA	Gm12756	ENSMUST00000126294	lincRNA		7	-1	34673999	599
ENSMUSG00000108957	processed_transcript	Gm45235	ENSMUST00000208016	processed_transcript		7	1	51855585	4465
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000118226	protein_coding	principal1	5	-1	113081110	892
ENSMUSG00000111259	protein_coding	Olfr1328	ENSMUST00000215312	protein_coding	alternative2	4	-1	118938612	5038
ENSMUSG00000111555	lincRNA	Gm47326	ENSMUST00000216728	lincRNA		9	1	14335612	401
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000028235	protein_coding	alternative2	2	1	35109492	2734
ENSMUSG00000072672	protein_coding	Duxbl3	ENSMUST00000100804	protein_coding	principal1	14	1	26262258	2336
ENSMUSG00000111259	protein_coding	Olfr1328	ENSMUST00000081960	protein_coding	principal2	4	-1	118934840	944
ENSMUSG00000048756	protein_coding	Foxo3	ENSMUST00000105502	protein_coding	principal1	10	-1	42276752	6848
ENSMUSG00000070360	protein_coding	Amy2a1	ENSMUST00000132353	protein_coding	principal1	3	-1	113532428	890
ENSMUSG00000105802	TEC	Gm43012	ENSMUST00000198569	TEC		5	1	137337409	937
ENSMUSG00000087552	antisense	Gm15819	ENSMUST00000153089	antisense		5	1	63923901	481
ENSMUSG00000031158	protein_coding	Timm17b	ENSMUST00000033498	protein_coding	principal1	X	1	7899357	2381
ENSMUSG00000048756	protein_coding	Foxo3	ENSMUST00000056974	protein_coding	principal1	10	-1	42276742	2889
ENSMUSG00000063362	protein_coding	Alg11	ENSMUST00000072572	protein_coding	principal1	8	1	22060721	4960
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000153832	nonsense_mediated_decay		5	-1	127617418	2673
ENSMUSG00000031158	protein_coding	Timm17b	ENSMUST00000146406	protein_coding		X	1	7899671	438
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000198486	protein_coding		5	-1	127604680	507
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000144603	nonsense_mediated_decay		5	-1	127632880	779
ENSMUSG00000048756	protein_coding	Foxo3	ENSMUST00000175881	protein_coding	principal1	10	-1	42276696	2535
ENSMUSG00000031158	protein_coding	Timm17b	ENSMUST00000150541	retained_intron		X	1	7906114	761
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000200212	processed_transcript		5	-1	127604607	166
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000119627	protein_coding	principal1	5	-1	113081584	828
ENSMUSG00000048756	protein_coding	Foxo3	ENSMUST00000177542	protein_coding		10	-1	42258366	514
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000199810	processed_transcript		5	-1	127604607	219
ENSMUSG00000040260	protein_coding	Daam2	ENSMUST00000224954	retained_intron		17	-1	49564337	8956
ENSMUSG00000063362	protein_coding	Alg11	ENSMUST00000110737	protein_coding		8	1	22060722	4833
ENSMUSG00000048756	protein_coding	Foxo3	ENSMUST00000105501	protein_coding		10	-1	42276755	1316
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000152727	protein_coding		5	-1	127609351	679
ENSMUSG00000087669	antisense	Gm11724	ENSMUST00000125577	antisense		11	-1	117791313	472
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000198727	processed_transcript		5	-1	127616883	200
ENSMUSG00000025413	protein_coding	Ttc4	ENSMUST00000142342	processed_transcript		4	-1	106678686	2118
ENSMUSG00000063362	protein_coding	Alg11	ENSMUST00000131624	protein_coding		8	1	22060740	479
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000155321	protein_coding		5	-1	127632897	333
ENSMUSG00000025413	protein_coding	Ttc4	ENSMUST00000132650	processed_transcript		4	-1	106667547	851
ENSMUSG00000029416	protein_coding	Slc15a4	ENSMUST00000182841	retained_intron		5	-1	127617381	2936
ENSMUSG00000025413	protein_coding	Ttc4	ENSMUST00000106772	protein_coding	alternative2	4	-1	106678866	935
ENSMUSG00000063362	protein_coding	Alg11	ENSMUST00000134474	processed_transcript		8	1	22069016	736
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000120506	protein_coding	principal1	5	-1	113081110	804
ENSMUSG00000051617	protein_coding	Krt9	ENSMUST00000059707	protein_coding	principal1	11	-1	100193246	2580
ENSMUSG00000025413	protein_coding	Ttc4	ENSMUST00000127133	processed_transcript		4	-1	106671683	758
ENSMUSG00000025413	protein_coding	Ttc4	ENSMUST00000139687	processed_transcript		4	-1	106671031	691
ENSMUSG00000028882	protein_coding	Ppp1r8	ENSMUST00000030702	protein_coding	principal3	4	-1	132843169	2037
ENSMUSG00000025413	protein_coding	Ttc4	ENSMUST00000135676	protein_coding		4	-1	106678891	752
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000144624	retained_intron		5	-1	108660811	5213
ENSMUSG00000025413	protein_coding	Ttc4	ENSMUST00000127571	processed_transcript		4	-1	106678901	383
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000117143	protein_coding	principal1	5	-1	113081583	749
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000132179	nonsense_mediated_decay		5	-1	108660811	5345
ENSMUSG00000025413	protein_coding	Ttc4	ENSMUST00000132572	processed_transcript		4	-1	106678889	725
ENSMUSG00000021789	protein_coding	Sftpa1	ENSMUST00000022314	protein_coding	principal1	14	1	41131782	851
ENSMUSG00000028882	protein_coding	Ppp1r8	ENSMUST00000148228	processed_transcript		4	-1	132843134	480
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000171847	protein_coding	principal3	17	-1	45599603	2033
ENSMUSG00000062833	protein_coding	Sval3	ENSMUST00000080742	protein_coding	principal1	6	1	41968140	550
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000132708	nonsense_mediated_decay		5	-1	108669672	5073
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000155042	retained_intron		5	-1	113080391	1419
ENSMUSG00000018999	protein_coding	Slc35b4	ENSMUST00000019143	protein_coding	principal1	6	-1	34177111	6253
ENSMUSG00000028882	protein_coding	Ppp1r8	ENSMUST00000131725	processed_transcript		4	-1	132843124	883
ENSMUSG00000028882	protein_coding	Ppp1r8	ENSMUST00000156777	processed_transcript		4	-1	132832975	694
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000123669	retained_intron		5	-1	108653648	3599
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000153382	retained_intron		5	-1	113080666	828
ENSMUSG00000028882	protein_coding	Ppp1r8	ENSMUST00000105919	protein_coding	alternative1	4	-1	132843123	1090
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000153365	retained_intron		5	-1	108660811	4529
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000140352	protein_coding		5	-1	113080653	456
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000145917	retained_intron		5	-1	108649927	2321
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000131708	protein_coding		5	-1	113081579	372
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000139169	retained_intron		5	-1	108653492	584
ENSMUSG00000030498	protein_coding	Gas2	ENSMUST00000129604	nonsense_mediated_decay		7	1	51862015	3158
ENSMUSG00000049971	protein_coding	Glt1d1	ENSMUST00000137157	retained_intron		5	1	127632262	1713
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000134039	processed_transcript		5	-1	113081580	385
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000156964	retained_intron		5	-1	108655133	749
ENSMUSG00000020910	protein_coding	Adprm	ENSMUST00000146338	nonsense_mediated_decay		11	-1	67052594	1531
ENSMUSG00000021789	protein_coding	Sftpa1	ENSMUST00000170719	protein_coding	principal1	14	1	41131788	2854
ENSMUSG00000004815	protein_coding	Dgkq	ENSMUST00000139598	retained_intron		5	-1	108655997	796
ENSMUSG00000029352	protein_coding	Crybb3	ENSMUST00000136352	protein_coding		5	-1	113081059	321
ENSMUSG00000002413	protein_coding	Braf	ENSMUST00000002487	protein_coding	principal1	6	-1	39725463	9728
ENSMUSG00000027820	protein_coding	Mme	ENSMUST00000194324	protein_coding		3	1	63241537	615
ENSMUSG00000102808	TEC	5430420F09Rik	ENSMUST00000194956	TEC		3	-1	52073387	1799
ENSMUSG00000023289	protein_coding	Sva	ENSMUST00000117406	protein_coding	alternative2	6	1	42038394	645
ENSMUSG00000102620	TEC	Gm37675	ENSMUST00000192303	TEC		3	-1	51875836	2847
ENSMUSG00000038425	protein_coding	Poli	ENSMUST00000161542	protein_coding		18	-1	70530138	2736
ENSMUSG00000030498	protein_coding	Gas2	ENSMUST00000107589	processed_transcript		7	1	51862427	1857
ENSMUSG00000047881	protein_coding	Rell1	ENSMUST00000154169	protein_coding	principal1	5	-1	63968897	3241
ENSMUSG00000102539	antisense	Gm37229	ENSMUST00000191643	antisense		3	1	51812951	732
ENSMUSG00000030498	protein_coding	Gas2	ENSMUST00000132335	retained_intron		7	1	51863904	306
ENSMUSG00000018999	protein_coding	Slc35b4	ENSMUST00000146514	retained_intron		6	-1	34163482	2320
ENSMUSG00000002413	protein_coding	Braf	ENSMUST00000101497	protein_coding		6	-1	39725193	2253
ENSMUSG00000023289	protein_coding	Sva	ENSMUST00000024059	protein_coding	principal2	6	1	42038394	651
ENSMUSG00000026976	protein_coding	Pax8	ENSMUST00000028355	protein_coding	principal1	2	-1	24475599	2560
ENSMUSG00000103484	TEC	Gm38000	ENSMUST00000192390	TEC		3	-1	51868559	1215
ENSMUSG00000002413	protein_coding	Braf	ENSMUST00000167073	retained_intron		6	-1	39644786	4475
ENSMUSG00000103284	TEC	3110080O07Rik	ENSMUST00000193469	TEC		3	-1	51830405	1021
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000185874	protein_coding		9	1	106453291	651
ENSMUSG00000102786	TEC	Gm38252	ENSMUST00000192701	TEC		3	-1	51886891	2616
ENSMUSG00000002413	protein_coding	Braf	ENSMUST00000167169	retained_intron		6	-1	39643254	384
ENSMUSG00000030117	protein_coding	Gdf3	ENSMUST00000032211	protein_coding	principal1	6	-1	122610087	2125
ENSMUSG00000102069	lincRNA	1700012I11Rik	ENSMUST00000187233	lincRNA		15	1	67226769	1039
ENSMUSG00000027371	protein_coding	Fahd2a	ENSMUST00000028848	protein_coding	principal1	2	-1	127444550	1211
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000185854	processed_transcript		9	1	106453407	389
ENSMUSG00000020910	protein_coding	Adprm	ENSMUST00000116363	protein_coding	principal1	11	-1	67052570	1283
ENSMUSG00000002413	protein_coding	Braf	ENSMUST00000169647	retained_intron		6	-1	39665079	528
ENSMUSG00000030117	protein_coding	Gdf3	ENSMUST00000204882	processed_transcript		6	-1	122609824	427
ENSMUSG00000020910	protein_coding	Adprm	ENSMUST00000136013	processed_transcript		11	-1	67040527	486
ENSMUSG00000047881	protein_coding	Rell1	ENSMUST00000087327	nonsense_mediated_decay		5	-1	63968823	3093
ENSMUSG00000020910	protein_coding	Adprm	ENSMUST00000127407	processed_transcript		11	-1	67052585	581
ENSMUSG00000026976	protein_coding	Pax8	ENSMUST00000149860	retained_intron		2	-1	24423082	345
ENSMUSG00000047881	protein_coding	Rell1	ENSMUST00000154532	processed_transcript		5	-1	63930914	490
ENSMUSG00000020910	protein_coding	Adprm	ENSMUST00000148379	processed_transcript		11	-1	67052591	428
ENSMUSG00000018999	protein_coding	Slc35b4	ENSMUST00000145857	retained_intron		6	-1	34176970	4110
ENSMUSG00000047881	protein_coding	Rell1	ENSMUST00000128967	retained_intron		5	-1	63930777	494
ENSMUSG00000020910	protein_coding	Adprm	ENSMUST00000146648	processed_transcript		11	-1	67052589	515
ENSMUSG00000026976	protein_coding	Pax8	ENSMUST00000149294	protein_coding		2	-1	24475097	1236
ENSMUSG00000047881	protein_coding	Rell1	ENSMUST00000127314	processed_transcript		5	-1	63968839	375
ENSMUSG00000026976	protein_coding	Pax8	ENSMUST00000153601	protein_coding		2	-1	24475564	1226
ENSMUSG00000027371	protein_coding	Fahd2a	ENSMUST00000146757	retained_intron		2	-1	127444565	1462
ENSMUSG00000027371	protein_coding	Fahd2a	ENSMUST00000123327	processed_transcript		2	-1	127438319	540
ENSMUSG00000018999	protein_coding	Slc35b4	ENSMUST00000138250	nonsense_mediated_decay		6	-1	34177082	984
ENSMUSG00000038425	protein_coding	Poli	ENSMUST00000121674	protein_coding	principal1	18	-1	70530620	2778
ENSMUSG00000027371	protein_coding	Fahd2a	ENSMUST00000137366	processed_transcript		2	-1	127444557	370
ENSMUSG00000038425	protein_coding	Poli	ENSMUST00000159389	protein_coding		18	-1	70530138	2662
ENSMUSG00000087356	antisense	Gm13856	ENSMUST00000126498	antisense		6	1	34151929	1742
ENSMUSG00000027371	protein_coding	Fahd2a	ENSMUST00000146437	processed_transcript		2	-1	127444480	492
ENSMUSG00000026976	protein_coding	Pax8	ENSMUST00000136228	protein_coding		2	-1	24475574	1381
ENSMUSG00000027371	protein_coding	Fahd2a	ENSMUST00000146615	retained_intron		2	-1	127444516	476
ENSMUSG00000113544	lincRNA	4833405L11Rik	ENSMUST00000222639	lincRNA		12	-1	29106737	2145
ENSMUSG00000026976	protein_coding	Pax8	ENSMUST00000153535	protein_coding		2	-1	24475215	626
ENSMUSG00000027371	protein_coding	Fahd2a	ENSMUST00000137502	processed_transcript		2	-1	127444508	411
ENSMUSG00000113544	lincRNA	4833405L11Rik	ENSMUST00000222186	lincRNA		12	-1	29106850	630
ENSMUSG00000038425	protein_coding	Poli	ENSMUST00000160713	nonsense_mediated_decay		18	-1	70530268	3504
ENSMUSG00000038425	protein_coding	Poli	ENSMUST00000235127	processed_transcript		18	-1	70511052	1229
ENSMUSG00000113986	lincRNA	Gm31333	ENSMUST00000220554	lincRNA		12	1	29139167	1200
ENSMUSG00000026976	protein_coding	Pax8	ENSMUST00000133746	processed_transcript		2	-1	24445900	554
ENSMUSG00000061143	protein_coding	Maml3	ENSMUST00000118075	protein_coding		3	-1	51796536	5450
ENSMUSG00000113986	lincRNA	Gm31333	ENSMUST00000222225	lincRNA		12	1	29141929	2225
ENSMUSG00000026976	protein_coding	Pax8	ENSMUST00000152614	retained_intron		2	-1	24475574	3386
ENSMUSG00000112776	processed_pseudogene	Gm6989	ENSMUST00000218409	processed_pseudogene		12	-1	29317568	654
ENSMUSG00000044345	protein_coding	Marveld1	ENSMUST00000061111	protein_coding	principal1	19	1	42147400	3066
ENSMUSG00000061143	protein_coding	Maml3	ENSMUST00000121440	protein_coding	principal1	3	-1	52105076	8288
ENSMUSG00000100689	protein_coding	Taar7e	ENSMUST00000092656	protein_coding	principal1	10	1	24037614	1077
ENSMUSG00000081894	processed_pseudogene	Gm14212	ENSMUST00000122023	processed_pseudogene		2	1	126864503	826
ENSMUSG00000049971	protein_coding	Glt1d1	ENSMUST00000118139	protein_coding	principal1	5	1	127632262	3413
ENSMUSG00000061143	protein_coding	Maml3	ENSMUST00000193568	retained_intron		3	-1	51796574	2198
ENSMUSG00000044345	protein_coding	Marveld1	ENSMUST00000184186	protein_coding		19	1	42147708	3755
ENSMUSG00000082960	processed_pseudogene	Gm6884	ENSMUST00000119318	processed_pseudogene		10	1	24045592	615
ENSMUSG00000103701	TEC	Gm10728	ENSMUST00000194665	TEC		3	-1	51908816	1831
ENSMUSG00000103701	TEC	Gm10728	ENSMUST00000194292	pseudogene		3	-1	51908816	1829
ENSMUSG00000049971	protein_coding	Glt1d1	ENSMUST00000134529	retained_intron		5	1	127657033	381
ENSMUSG00000025572	protein_coding	Tmc6	ENSMUST00000131606	nonsense_mediated_decay		11	-1	117779648	2798
ENSMUSG00000074603	TEC	Gm10729	ENSMUST00000193403	TEC		3	1	51693716	1375
ENSMUSG00000038425	protein_coding	Poli	ENSMUST00000043286	protein_coding		18	-1	70530434	2591
ENSMUSG00000100950	protein_coding	Taar7f	ENSMUST00000071691	protein_coding	principal1	10	1	24049510	1077
ENSMUSG00000074603	TEC	Gm10729	ENSMUST00000099104	TEC		3	1	51693771	1320
ENSMUSG00000105362	TEC	Gm43474	ENSMUST00000196415	TEC		5	1	127616992	774
ENSMUSG00000102147	TEC	Gm38055	ENSMUST00000195353	TEC		3	-1	51989847	2217
ENSMUSG00000102423	TEC	Gm37465	ENSMUST00000192845	TEC		3	-1	52004025	3290
ENSMUSG00000117967	processed_pseudogene	Gm5246	ENSMUST00000236477	processed_pseudogene		19	1	44851009	971
ENSMUSG00000118542	unprocessed_pseudogene	AC117671.1	ENSMUST00000238794	unprocessed_pseudogene		10	1	24066654	157
ENSMUSG00000115588	processed_pseudogene	Gm18533	ENSMUST00000226404	processed_pseudogene		15	1	19204246	1093
ENSMUSG00000104161	antisense	Gm20089	ENSMUST00000192391	antisense		3	1	51980941	2084
ENSMUSG00000115352	lincRNA	Gm49160	ENSMUST00000226570	lincRNA		15	1	19237749	319
ENSMUSG00000103784	TEC	Gm37526	ENSMUST00000194640	TEC		3	-1	51991959	619
ENSMUSG00000021714	protein_coding	Cenpk	ENSMUST00000224500	nonsense_mediated_decay		13	1	104228611	1353
ENSMUSG00000114971	lincRNA	Gm49162	ENSMUST00000228706	lincRNA		15	-1	19395422	1144
ENSMUSG00000030498	protein_coding	Gas2	ENSMUST00000051912	protein_coding	principal1	7	1	51878967	2181
ENSMUSG00000021193	protein_coding	Pitrm1	ENSMUST00000021611	protein_coding		13	1	6548149	3318
ENSMUSG00000115717	TEC	Gm49161	ENSMUST00000227813	TEC		15	1	19305320	983
ENSMUSG00000104339	TEC	C130089K02Rik	ENSMUST00000194534	TEC		3	-1	52064244	6960
ENSMUSG00000102732	TEC	Gm37342	ENSMUST00000194588	TEC		3	-1	51762088	4965
ENSMUSG00000046947	protein_coding	Adck2	ENSMUST00000140364	protein_coding	principal1	6	1	39573873	3542
ENSMUSG00000078746	protein_coding	Fam205a4	ENSMUST00000108026	protein_coding	principal1	4	1	41966058	4130
ENSMUSG00000030498	protein_coding	Gas2	ENSMUST00000107591	protein_coding	principal1	7	1	51879050	2232
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000107289	protein_coding	principal5	4	-1	76449980	9899
ENSMUSG00000071089	protein_coding	Trim75	ENSMUST00000095295	protein_coding	principal1	8	-1	64987646	3273
ENSMUSG00000031754	protein_coding	Nudt21	ENSMUST00000034204	protein_coding	principal1	8	-1	94037031	5010
ENSMUSG00000046947	protein_coding	Adck2	ENSMUST00000145788	protein_coding		6	1	39573959	695
ENSMUSG00000030498	protein_coding	Gas2	ENSMUST00000145049	protein_coding		7	1	51880331	753
ENSMUSG00000027820	protein_coding	Mme	ENSMUST00000194836	protein_coding		3	1	63295266	921
ENSMUSG00000096442	protein_coding	Taar8a	ENSMUST00000051133	protein_coding	principal1	10	1	24076500	1035
ENSMUSG00000028071	protein_coding	Sh2d2a	ENSMUST00000107581	protein_coding	alternative2	3	1	87846755	1807
ENSMUSG00000071089	protein_coding	Trim75	ENSMUST00000210982	protein_coding		8	-1	64987831	652
ENSMUSG00000031754	protein_coding	Nudt21	ENSMUST00000212622	protein_coding		8	-1	94032435	664
ENSMUSG00000027820	protein_coding	Mme	ENSMUST00000191633	protein_coding		3	1	63295448	569
ENSMUSG00000104374	TEC	Gm37517	ENSMUST00000194004	TEC		1	-1	83332586	1289
ENSMUSG00000046947	protein_coding	Adck2	ENSMUST00000051249	protein_coding		6	1	39573964	2287
ENSMUSG00000030498	protein_coding	Gas2	ENSMUST00000208711	protein_coding	principal1	7	1	51887918	1962
ENSMUSG00000031754	protein_coding	Nudt21	ENSMUST00000212981	protein_coding		8	-1	94037006	1184
ENSMUSG00000040260	protein_coding	Daam2	ENSMUST00000057610	protein_coding	principal1	17	-1	49564343	3646
ENSMUSG00000030498	protein_coding	Gas2	ENSMUST00000155925	processed_transcript		7	1	51926436	354
ENSMUSG00000046947	protein_coding	Adck2	ENSMUST00000134913	retained_intron		6	1	39574984	677
ENSMUSG00000108818	processed_pseudogene	Gm44869	ENSMUST00000208836	processed_pseudogene		8	-1	4362654	357
ENSMUSG00000030498	protein_coding	Gas2	ENSMUST00000145723	processed_transcript		7	1	51943684	274
ENSMUSG00000031754	protein_coding	Nudt21	ENSMUST00000212911	protein_coding		8	-1	94028927	470
ENSMUSG00000082414	unprocessed_pseudogene	Gm13303	ENSMUST00000117125	unprocessed_pseudogene		4	-1	42026902	1474
ENSMUSG00000031848	protein_coding	Lsm4	ENSMUST00000034311	protein_coding	principal1	8	1	70673248	925
ENSMUSG00000046947	protein_coding	Adck2	ENSMUST00000149304	nonsense_mediated_decay		6	1	39576392	490
ENSMUSG00000040260	protein_coding	Daam2	ENSMUST00000224595	protein_coding		17	-1	49564337	1926
ENSMUSG00000084133	processed_pseudogene	Gm12856	ENSMUST00000119471	processed_pseudogene		4	-1	118943352	1293
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000102834	protein_coding		4	-1	76133882	8084
ENSMUSG00000046947	protein_coding	Adck2	ENSMUST00000127427	retained_intron		6	1	39583945	330
ENSMUSG00000040260	protein_coding	Daam2	ENSMUST00000226030	retained_intron		17	-1	49564306	1039
ENSMUSG00000031848	protein_coding	Lsm4	ENSMUST00000146972	protein_coding		8	1	70673379	365
ENSMUSG00000092118	protein_coding	Fancf	ENSMUST00000169357	protein_coding	principal1	7	-1	51862267	1691
ENSMUSG00000031848	protein_coding	Lsm4	ENSMUST00000210071	protein_coding		8	1	70673385	575
ENSMUSG00000113178	processed_pseudogene	Mylf-ps	ENSMUST00000222174	processed_pseudogene		12	-1	101222417	421
ENSMUSG00000031848	protein_coding	Lsm4	ENSMUST00000210987	protein_coding		8	1	70673432	636
ENSMUSG00000031848	protein_coding	Lsm4	ENSMUST00000153689	retained_intron		8	1	70677665	375
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000173376	protein_coding		4	-1	76594299	4793
ENSMUSG00000020745	protein_coding	Pafah1b1	ENSMUST00000021091	protein_coding	principal1	11	-1	74724670	5803
ENSMUSG00000112390	processed_transcript	Gm20208	ENSMUST00000219905	antisense		12	-1	29531115	1528
ENSMUSG00000021193	protein_coding	Pitrm1	ENSMUST00000222485	protein_coding	principal1	13	1	6548151	3906
ENSMUSG00000024793	protein_coding	Tnfrsf25	ENSMUST00000025706	protein_coding	alternative2	4	1	152115934	1661
ENSMUSG00000113134	transcribed_unprocessed_pseudogene	Gm18795	ENSMUST00000223373	transcribed_unprocessed_pseudogene		12	1	101218185	2964
ENSMUSG00000028071	protein_coding	Sh2d2a	ENSMUST00000029709	protein_coding	principal3	3	1	87847005	4484
ENSMUSG00000113134	transcribed_unprocessed_pseudogene	Gm18795	ENSMUST00000222371	processed_transcript		12	1	101316881	1864
ENSMUSG00000112390	processed_transcript	Gm20208	ENSMUST00000218104	lincRNA		12	-1	29534891	525
ENSMUSG00000037275	protein_coding	Gemin5	ENSMUST00000035604	protein_coding	principal3	11	-1	58168539	4922
ENSMUSG00000020745	protein_coding	Pafah1b1	ENSMUST00000102520	protein_coding	principal1	11	-1	74723858	5789
ENSMUSG00000021607	protein_coding	Mrpl36	ENSMUST00000221730	protein_coding	principal1	13	1	73328513	717
ENSMUSG00000037275	protein_coding	Gemin5	ENSMUST00000102711	protein_coding	alternative2	11	-1	58168539	4919
ENSMUSG00000112663	antisense	C630031E19Rik	ENSMUST00000218114	antisense		12	-1	29686445	3059
ENSMUSG00000028071	protein_coding	Sh2d2a	ENSMUST00000194639	retained_intron		3	1	87847011	1874
ENSMUSG00000021193	protein_coding	Pitrm1	ENSMUST00000221911	nonsense_mediated_decay		13	1	6548159	440
ENSMUSG00000024793	protein_coding	Tnfrsf25	ENSMUST00000035275	protein_coding	principal3	4	1	152116343	1603
ENSMUSG00000020745	protein_coding	Pafah1b1	ENSMUST00000156794	retained_intron		11	-1	74724318	7165
ENSMUSG00000073765	antisense	Gm12863	ENSMUST00000155069	antisense		4	-1	118954919	536
ENSMUSG00000037275	protein_coding	Gemin5	ENSMUST00000134733	processed_transcript		11	-1	58139473	627
ENSMUSG00000037275	protein_coding	Gemin5	ENSMUST00000134953	protein_coding		11	-1	58160768	601
ENSMUSG00000116170	processed_pseudogene	Gm6332	ENSMUST00000230534	processed_pseudogene		16	-1	12951463	683
ENSMUSG00000024793	protein_coding	Tnfrsf25	ENSMUST00000127111	processed_transcript		4	1	152116399	346
ENSMUSG00000020745	protein_coding	Pafah1b1	ENSMUST00000155493	protein_coding		11	-1	74723171	525
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000174831	protein_coding		4	-1	76325243	4518
ENSMUSG00000083720	processed_pseudogene	Gm12901	ENSMUST00000118690	processed_pseudogene		4	1	123258046	532
ENSMUSG00000026547	protein_coding	Tagln2	ENSMUST00000138296	retained_intron		1	1	172500047	1101
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000098005	protein_coding		4	-1	76325264	4542
ENSMUSG00000024793	protein_coding	Tnfrsf25	ENSMUST00000153619	processed_transcript		4	1	152117971	731
ENSMUSG00000021607	protein_coding	Mrpl36	ENSMUST00000022098	protein_coding	principal1	13	1	73330988	923
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000174023	protein_coding		4	-1	76325264	4530
ENSMUSG00000109236	processed_pseudogene	Gm44833	ENSMUST00000208368	processed_pseudogene		7	1	44545147	331
ENSMUSG00000114921	processed_pseudogene	Gm18578	ENSMUST00000223947	processed_pseudogene		14	1	26302705	2209
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000174531	protein_coding		4	-1	76325264	4509
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000174180	protein_coding	alternative2	4	-1	76325264	5694
ENSMUSG00000037784	protein_coding	Dzip1l	ENSMUST00000078367	protein_coding	principal3	9	1	99629542	3981
ENSMUSG00000021607	protein_coding	Mrpl36	ENSMUST00000222030	protein_coding	principal1	13	1	73331026	680
ENSMUSG00000021193	protein_coding	Pitrm1	ENSMUST00000221120	nonsense_mediated_decay		13	1	6548174	486
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000050757	protein_coding		4	-1	76344243	4698
ENSMUSG00000020811	protein_coding	Wscd1	ENSMUST00000150531	protein_coding		11	1	71749920	716
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000135803	protein_coding		2	1	28513125	801
ENSMUSG00000037275	protein_coding	Gemin5	ENSMUST00000172035	protein_coding	alternative2	11	-1	58168539	6213
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000212365	protein_coding		4	-1	76084457	889
ENSMUSG00000004542	protein_coding	Psg19	ENSMUST00000004657	protein_coding	principal1	7	-1	18798510	2105
ENSMUSG00000037784	protein_coding	Dzip1l	ENSMUST00000112885	protein_coding	principal3	9	1	99629578	4350
ENSMUSG00000021193	protein_coding	Pitrm1	ENSMUST00000220454	nonsense_mediated_decay		13	1	6548235	778
ENSMUSG00000004542	protein_coding	Psg19	ENSMUST00000182853	protein_coding		7	-1	18798510	1518
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000173560	retained_intron		4	-1	76101444	4780
ENSMUSG00000045545	protein_coding	Krt14	ENSMUST00000137265	processed_transcript		11	-1	100206030	1122
ENSMUSG00000038215	protein_coding	Cep44	ENSMUST00000123493	protein_coding		8	-1	56545465	1204
ENSMUSG00000004542	protein_coding	Psg19	ENSMUST00000182681	processed_transcript		7	-1	18798520	514
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000173662	protein_coding		4	-1	76086516	813
ENSMUSG00000004542	protein_coding	Psg19	ENSMUST00000182916	retained_intron		7	-1	18798510	1698
ENSMUSG00000037784	protein_coding	Dzip1l	ENSMUST00000112886	protein_coding	alternative2	9	1	99629843	3970
ENSMUSG00000024661	protein_coding	Fth1	ENSMUST00000235196	protein_coding	principal1	19	1	9980598	1494
ENSMUSG00000021606	protein_coding	Ndufs6	ENSMUST00000223293	protein_coding		13	-1	73328462	757
ENSMUSG00000021193	protein_coding	Pitrm1	ENSMUST00000223492	retained_intron		13	1	6567003	899
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000172811	nonsense_mediated_decay		4	-1	76107395	636
ENSMUSG00000021933	protein_coding	Gucy1b2	ENSMUST00000022501	protein_coding	principal3	14	-1	62456289	2711
ENSMUSG00000024661	protein_coding	Fth1	ENSMUST00000235747	retained_intron		19	1	9981923	568
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000174832	protein_coding		4	-1	76134143	634
ENSMUSG00000100186	protein_coding	Taar8b	ENSMUST00000092654	protein_coding	principal1	10	-1	24092294	1035
ENSMUSG00000037784	protein_coding	Dzip1l	ENSMUST00000112884	protein_coding	alternative2	9	1	99634861	3791
ENSMUSG00000021193	protein_coding	Pitrm1	ENSMUST00000221431	retained_intron		13	1	6574838	495
ENSMUSG00000021193	protein_coding	Pitrm1	ENSMUST00000222061	retained_intron		13	1	6577161	445
ENSMUSG00000021933	protein_coding	Gucy1b2	ENSMUST00000165651	protein_coding	alternative2	14	-1	62456286	2548
ENSMUSG00000021606	protein_coding	Ndufs6	ENSMUST00000222930	protein_coding		13	-1	73328455	512
ENSMUSG00000037784	protein_coding	Dzip1l	ENSMUST00000134969	processed_transcript		9	1	99644091	404
ENSMUSG00000103694	TEC	Gm37530	ENSMUST00000191759	TEC		4	1	42034581	4932
ENSMUSG00000037784	protein_coding	Dzip1l	ENSMUST00000190893	retained_intron		9	1	99650216	3470
ENSMUSG00000096256	unprocessed_pseudogene	Gm21093	ENSMUST00000084677	unprocessed_pseudogene		4	-1	42035425	3193
ENSMUSG00000024661	protein_coding	Fth1	ENSMUST00000025563	protein_coding	principal1	19	1	9982646	929
ENSMUSG00000021714	protein_coding	Cenpk	ENSMUST00000070761	protein_coding		13	1	104228955	1306
ENSMUSG00000021933	protein_coding	Gucy1b2	ENSMUST00000128573	processed_transcript		14	-1	62454793	656
ENSMUSG00000109241	processed_pseudogene	Gm7434	ENSMUST00000208558	processed_pseudogene		8	1	4391726	408
ENSMUSG00000024661	protein_coding	Fth1	ENSMUST00000235407	protein_coding		19	1	9982704	516
ENSMUSG00000021606	protein_coding	Ndufs6	ENSMUST00000022097	protein_coding	principal1	13	-1	73328542	568
ENSMUSG00000109397	TEC	Gm45117	ENSMUST00000207250	TEC		8	1	4399238	1774
ENSMUSG00000079588	protein_coding	Tmem182	ENSMUST00000114765	protein_coding	principal1	1	1	40805601	2716
ENSMUSG00000021714	protein_coding	Cenpk	ENSMUST00000224179	retained_intron		13	1	104228966	2077
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000205269	retained_intron		6	-1	71882595	1161
ENSMUSG00000024661	protein_coding	Fth1	ENSMUST00000237316	retained_intron		19	1	9982704	2062
ENSMUSG00000109356	unprocessed_pseudogene	Gm45118	ENSMUST00000208928	unprocessed_pseudogene		8	-1	4402845	825
ENSMUSG00000021714	protein_coding	Cenpk	ENSMUST00000225557	protein_coding		13	1	104228968	351
ENSMUSG00000024661	protein_coding	Fth1	ENSMUST00000237465	protein_coding		19	1	9982723	592
ENSMUSG00000021714	protein_coding	Cenpk	ENSMUST00000224857	nonsense_mediated_decay		13	1	104228976	856
ENSMUSG00000021606	protein_coding	Ndufs6	ENSMUST00000147407	nonsense_mediated_decay		13	-1	73328452	534
ENSMUSG00000108603	lincRNA	5330411O13Rik	ENSMUST00000205759	lincRNA		7	1	78818285	1544
ENSMUSG00000021671	protein_coding	Poc5	ENSMUST00000099295	protein_coding	principal1	13	1	96388294	5183
ENSMUSG00000024661	protein_coding	Fth1	ENSMUST00000235129	retained_intron		19	1	9982747	903
ENSMUSG00000024661	protein_coding	Fth1	ENSMUST00000236195	protein_coding		19	1	9983115	333
ENSMUSG00000094136	processed_pseudogene	Gm5973	ENSMUST00000178542	processed_pseudogene		1	-1	40864232	496
ENSMUSG00000083505	processed_pseudogene	Gm7541	ENSMUST00000118361	processed_pseudogene		16	-1	8623720	535
ENSMUSG00000026163	protein_coding	Sphkap	ENSMUST00000160953	protein_coding	principal1	1	-1	83408200	8154
ENSMUSG00000070530	protein_coding	Wfdc16	ENSMUST00000109336	protein_coding	principal1	2	-1	164638796	1116
ENSMUSG00000024661	protein_coding	Fth1	ENSMUST00000236403	retained_intron		19	1	9984147	715
ENSMUSG00000116095	processed_pseudogene	Gm49549	ENSMUST00000229808	processed_pseudogene		16	-1	8625317	109
ENSMUSG00000045545	protein_coding	Krt14	ENSMUST00000007272	protein_coding	principal1	11	-1	100207548	1698
ENSMUSG00000021714	protein_coding	Cenpk	ENSMUST00000022227	protein_coding	principal1	13	1	104229388	1217
ENSMUSG00000118633	transcribed_unprocessed_pseudogene	CT868690.1	ENSMUST00000239354	processed_transcript		4	-1	42072733	566
ENSMUSG00000080916	processed_pseudogene	Gm12463	ENSMUST00000118271	processed_pseudogene		4	-1	44753125	849
ENSMUSG00000021671	protein_coding	Poc5	ENSMUST00000221039	retained_intron		13	1	96388360	1810
ENSMUSG00000083740	processed_pseudogene	Gm11456	ENSMUST00000121070	processed_pseudogene		2	-1	164643200	256
ENSMUSG00000026547	protein_coding	Tagln2	ENSMUST00000111230	protein_coding	principal1	1	1	172500047	1586
ENSMUSG00000114753	lincRNA	Gm34059	ENSMUST00000225697	lincRNA		14	-1	26324954	5711
ENSMUSG00000021714	protein_coding	Cenpk	ENSMUST00000225939	retained_intron		13	1	104235875	409
ENSMUSG00000021671	protein_coding	Poc5	ENSMUST00000222640	processed_transcript		13	1	96393225	716
ENSMUSG00000118633	transcribed_unprocessed_pseudogene	CT868690.1	ENSMUST00000239230	processed_transcript		4	-1	42072779	745
ENSMUSG00000084167	processed_pseudogene	Gm13924	ENSMUST00000119899	processed_pseudogene		2	-1	109458733	486
ENSMUSG00000021714	protein_coding	Cenpk	ENSMUST00000224098	processed_transcript		13	1	104238269	1404
ENSMUSG00000118633	transcribed_unprocessed_pseudogene	CT868690.1	ENSMUST00000239308	transcribed_unprocessed_pseudogene		4	-1	42072563	324
ENSMUSG00000026163	protein_coding	Sphkap	ENSMUST00000159078	protein_coding		1	-1	83279165	5888
ENSMUSG00000021671	protein_coding	Poc5	ENSMUST00000223478	processed_transcript		13	1	96404503	500
ENSMUSG00000081746	unprocessed_pseudogene	Gm13925	ENSMUST00000117315	unprocessed_pseudogene		2	1	109477003	243
ENSMUSG00000021671	protein_coding	Poc5	ENSMUST00000222792	processed_transcript		13	1	96414533	405
ENSMUSG00000095348	antisense	Gm3892	ENSMUST00000178043	antisense		4	1	42055152	3539
ENSMUSG00000095348	antisense	Gm3892	ENSMUST00000107991	antisense		4	1	42087972	1395
ENSMUSG00000086893	antisense	Gm11365	ENSMUST00000144277	antisense		13	1	29940283	774
ENSMUSG00000026547	protein_coding	Tagln2	ENSMUST00000192460	protein_coding		1	1	172500245	369
ENSMUSG00000086783	lincRNA	Gm14262	ENSMUST00000148309	lincRNA		2	-1	168295121	326
ENSMUSG00000074594	protein_coding	Wfdc9	ENSMUST00000109335	protein_coding	principal1	2	-1	164656583	547
ENSMUSG00000026547	protein_coding	Tagln2	ENSMUST00000111228	protein_coding	principal1	1	1	172501252	716
ENSMUSG00000100004	protein_coding	Taar8c	ENSMUST00000170267	protein_coding	principal1	10	-1	24101912	1035
ENSMUSG00000074594	protein_coding	Wfdc9	ENSMUST00000099095	protein_coding	principal1	2	-1	164651763	252
ENSMUSG00000037424	protein_coding	Taar9	ENSMUST00000041180	protein_coding	principal1	10	-1	24109534	1047
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000131648	retained_intron		13	-1	6588966	2680
ENSMUSG00000038215	protein_coding	Cep44	ENSMUST00000040330	protein_coding	principal1	8	-1	56550857	1690
ENSMUSG00000026163	protein_coding	Sphkap	ENSMUST00000053075	retained_intron		1	-1	83408165	5757
ENSMUSG00000026163	protein_coding	Sphkap	ENSMUST00000160237	retained_intron		1	-1	83408139	757
ENSMUSG00000109490	unprocessed_pseudogene	Gm19126	ENSMUST00000207896	unprocessed_pseudogene		7	-1	18801853	509
ENSMUSG00000038215	protein_coding	Cep44	ENSMUST00000211049	retained_intron		8	-1	56534575	2083
ENSMUSG00000026163	protein_coding	Sphkap	ENSMUST00000160567	retained_intron		1	-1	83408165	316
ENSMUSG00000038215	protein_coding	Cep44	ENSMUST00000210545	retained_intron		8	-1	56538667	1451
ENSMUSG00000070529	protein_coding	Wfdc10	ENSMUST00000094344	protein_coding	principal1	2	1	164656046	459
ENSMUSG00000079140	processed_pseudogene	Gm6374	ENSMUST00000159051	processed_pseudogene		1	1	83314513	788
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000167692	protein_coding	alternative2	17	-1	45593640	2092
ENSMUSG00000082099	processed_pseudogene	Gm12013	ENSMUST00000121971	processed_pseudogene		11	-1	17095644	155
ENSMUSG00000115516	processed_pseudogene	Gm8341	ENSMUST00000226898	processed_pseudogene		15	-1	19456352	1598
ENSMUSG00000033540	protein_coding	Idua	ENSMUST00000071650	protein_coding	principal1	5	1	108660331	3536
ENSMUSG00000115413	lincRNA	Gm49166	ENSMUST00000226230	lincRNA		15	1	19678232	675
ENSMUSG00000021713	protein_coding	Ppwd1	ENSMUST00000022226	protein_coding	principal1	13	-1	104228822	2342
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000053317	protein_coding	principal4	2	1	109674700	4266
ENSMUSG00000034998	protein_coding	Foxn2	ENSMUST00000112238	protein_coding	principal1	17	1	88440711	5085
ENSMUSG00000114488	processed_pseudogene	Gm5802	ENSMUST00000224324	processed_pseudogene		14	-1	62541193	701
ENSMUSG00000114292	processed_pseudogene	Gm6076	ENSMUST00000224336	processed_pseudogene		14	-1	62515295	448
ENSMUSG00000038215	protein_coding	Cep44	ENSMUST00000140107	protein_coding		8	-1	56550843	770
ENSMUSG00000038215	protein_coding	Cep44	ENSMUST00000134162	protein_coding		8	-1	56550799	687
ENSMUSG00000034998	protein_coding	Foxn2	ENSMUST00000155640	protein_coding		17	1	88440735	543
ENSMUSG00000021713	protein_coding	Ppwd1	ENSMUST00000225798	retained_intron		13	-1	104228843	1375
ENSMUSG00000100486	protein_coding	Gm4131	ENSMUST00000186010	protein_coding	principal1	14	-1	62481155	1264
ENSMUSG00000051736	protein_coding	Fam229b	ENSMUST00000063204	protein_coding	principal1	10	-1	39133906	745
ENSMUSG00000038215	protein_coding	Cep44	ENSMUST00000135337	protein_coding		8	-1	56550872	474
ENSMUSG00000100486	protein_coding	Gm4131	ENSMUST00000209021	processed_transcript		14	-1	62566921	1135
ENSMUSG00000021713	protein_coding	Ppwd1	ENSMUST00000223755	retained_intron		13	-1	104228766	3455
ENSMUSG00000037572	protein_coding	Wdhd1	ENSMUST00000187531	protein_coding	principal5	14	-1	47276832	4260
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000107287	processed_transcript		4	-1	78211895	2472
ENSMUSG00000038215	protein_coding	Cep44	ENSMUST00000130930	protein_coding		8	-1	56551047	800
ENSMUSG00000034998	protein_coding	Foxn2	ENSMUST00000134107	retained_intron		17	1	88440758	2892
ENSMUSG00000033540	protein_coding	Idua	ENSMUST00000140620	nonsense_mediated_decay		5	1	108669106	3412
ENSMUSG00000051736	protein_coding	Fam229b	ENSMUST00000139743	protein_coding	principal1	10	-1	39133900	679
ENSMUSG00000038215	protein_coding	Cep44	ENSMUST00000127877	processed_transcript		8	-1	56550257	599
ENSMUSG00000037572	protein_coding	Wdhd1	ENSMUST00000111792	protein_coding	alternative2	14	-1	47276857	4174
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000084467	processed_transcript		4	-1	76325288	641
ENSMUSG00000038215	protein_coding	Cep44	ENSMUST00000126830	processed_transcript		8	-1	56550803	797
ENSMUSG00000034998	protein_coding	Foxn2	ENSMUST00000141052	nonsense_mediated_decay		17	1	88440775	1824
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000156656	processed_transcript		4	-1	78211867	3712
ENSMUSG00000051736	protein_coding	Fam229b	ENSMUST00000137132	protein_coding	principal1	10	-1	39123102	663
ENSMUSG00000037572	protein_coding	Wdhd1	ENSMUST00000228810	retained_intron		14	-1	47245270	706
ENSMUSG00000012282	protein_coding	Wnt8a	ENSMUST00000012426	protein_coding	principal1	18	1	34542313	1746
ENSMUSG00000082239	processed_pseudogene	Gm14234	ENSMUST00000119539	processed_pseudogene		2	-1	168418574	845
ENSMUSG00000037572	protein_coding	Wdhd1	ENSMUST00000227041	protein_coding		14	-1	47256261	203
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000138955	processed_transcript		4	-1	78211739	1316
ENSMUSG00000051736	protein_coding	Fam229b	ENSMUST00000134279	protein_coding	principal1	10	-1	39133848	700
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000173592	retained_intron		4	-1	78211739	1706
ENSMUSG00000085451	lincRNA	Gm40614	ENSMUST00000125161	lincRNA		10	-1	24132480	1254
ENSMUSG00000035184	protein_coding	Fam124a	ENSMUST00000162987	processed_transcript		14	1	62555737	1671
ENSMUSG00000051736	protein_coding	Fam229b	ENSMUST00000149949	protein_coding	principal1	10	-1	39133900	736
ENSMUSG00000070343	processed_pseudogene	Gm10288	ENSMUST00000084614	processed_pseudogene		3	-1	146839347	537
ENSMUSG00000037572	protein_coding	Wdhd1	ENSMUST00000111790	protein_coding		14	-1	47276832	2962
ENSMUSG00000035184	protein_coding	Fam124a	ENSMUST00000161899	processed_transcript		14	1	62555737	377
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000140422	processed_transcript		4	-1	78211961	2124
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000064889	protein_coding	principal3	17	-1	45595570	1988
ENSMUSG00000032473	protein_coding	Cldn18	ENSMUST00000035048	protein_coding	principal3	9	-1	99710063	4172
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000129550	processed_transcript		4	-1	78211852	1151
ENSMUSG00000030772	protein_coding	Dkk3	ENSMUST00000033036	protein_coding	principal1	7	-1	112159057	3359
ENSMUSG00000020811	protein_coding	Wscd1	ENSMUST00000021168	protein_coding	principal1	11	1	71750685	2757
ENSMUSG00000033540	protein_coding	Idua	ENSMUST00000151445	retained_intron		5	1	108669295	1637
ENSMUSG00000028399	protein_coding	Ptprd	ENSMUST00000134604	retained_intron		4	-1	78211843	606
ENSMUSG00000045690	protein_coding	Wdr89	ENSMUST00000062370	protein_coding	principal1	12	-1	75669537	2979
ENSMUSG00000037572	protein_coding	Wdhd1	ENSMUST00000139124	retained_intron		14	-1	47276807	2777
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000097317	protein_coding	alternative2	17	-1	45595903	1931
ENSMUSG00000033540	protein_coding	Idua	ENSMUST00000119212	protein_coding		5	1	108669311	3022
ENSMUSG00000081890	processed_pseudogene	Gm11243	ENSMUST00000122335	processed_pseudogene		4	1	76793729	394
ENSMUSG00000020811	protein_coding	Wscd1	ENSMUST00000108511	protein_coding	principal1	11	1	71750980	2866
ENSMUSG00000115298	processed_pseudogene	Gm18741	ENSMUST00000227892	processed_pseudogene		15	1	19749723	635
ENSMUSG00000115233	processed_pseudogene	Gm46498	ENSMUST00000226721	processed_pseudogene		15	1	19756404	416
ENSMUSG00000081936	processed_pseudogene	Gm11244	ENSMUST00000121243	processed_pseudogene		4	-1	76811791	237
ENSMUSG00000032473	protein_coding	Cldn18	ENSMUST00000112882	protein_coding	alternative1	9	-1	99717267	1750
ENSMUSG00000045690	protein_coding	Wdr89	ENSMUST00000187307	protein_coding	principal1	12	-1	75669527	2381
ENSMUSG00000083050	processed_pseudogene	Gm11242	ENSMUST00000120103	processed_pseudogene		4	1	76692143	2457
ENSMUSG00000115830	processed_pseudogene	Gm49176	ENSMUST00000226614	processed_pseudogene		15	-1	20018865	400
ENSMUSG00000081656	processed_pseudogene	Gm11246	ENSMUST00000120880	processed_pseudogene		4	1	76927311	345
ENSMUSG00000033540	protein_coding	Idua	ENSMUST00000139734	nonsense_mediated_decay		5	1	108669347	2539
ENSMUSG00000118552	protein_coding	AC124742.1	ENSMUST00000238938	protein_coding	principal1	12	-1	75631318	348
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000166119	protein_coding	alternative2	17	-1	45592497	1598
ENSMUSG00000102810	TEC	Gm37815	ENSMUST00000195665	TEC		15	-1	20240650	411
ENSMUSG00000110373	antisense	Gm42303	ENSMUST00000209960	antisense		4	1	76451231	1170
ENSMUSG00000115112	processed_pseudogene	Gm19207	ENSMUST00000227960	processed_pseudogene		15	-1	20284041	757
ENSMUSG00000035184	protein_coding	Fam124a	ENSMUST00000039064	protein_coding	principal1	14	1	62555737	3558
ENSMUSG00000051736	protein_coding	Fam229b	ENSMUST00000124941	protein_coding	principal1	10	-1	39133900	721
ENSMUSG00000084090	processed_pseudogene	Gm11245	ENSMUST00000119419	processed_pseudogene		4	1	76837779	1037
ENSMUSG00000032473	protein_coding	Cldn18	ENSMUST00000136429	protein_coding		9	-1	99710009	1409
ENSMUSG00000020811	protein_coding	Wscd1	ENSMUST00000138339	retained_intron		11	1	71751376	1731
ENSMUSG00000033540	protein_coding	Idua	ENSMUST00000159464	processed_transcript		5	1	108669459	447
ENSMUSG00000115086	processed_pseudogene	Gm49177	ENSMUST00000227779	processed_pseudogene		15	1	20329490	380
ENSMUSG00000020811	protein_coding	Wscd1	ENSMUST00000108510	protein_coding	principal1	11	1	71751376	2956
ENSMUSG00000033540	protein_coding	Idua	ENSMUST00000133482	retained_intron		5	1	108682605	600
ENSMUSG00000115203	processed_pseudogene	Gm49178	ENSMUST00000227881	processed_pseudogene		15	1	20423361	297
ENSMUSG00000032473	protein_coding	Cldn18	ENSMUST00000131922	protein_coding		9	-1	99717267	860
ENSMUSG00000033948	protein_coding	Zswim5	ENSMUST00000044823	protein_coding	principal1	4	1	116877376	5582
ENSMUSG00000035184	protein_coding	Fam124a	ENSMUST00000160745	processed_transcript		14	1	62555775	293
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000164769	protein_coding		17	-1	45592262	1226
ENSMUSG00000051736	protein_coding	Fam229b	ENSMUST00000136546	protein_coding	principal1	10	-1	39122314	592
ENSMUSG00000114175	lincRNA	Gm48051	ENSMUST00000222996	lincRNA		13	1	49970001	1185
ENSMUSG00000104219	TEC	Gm37989	ENSMUST00000195202	TEC		1	-1	83427398	803
ENSMUSG00000114175	lincRNA	Gm48051	ENSMUST00000222242	lincRNA		13	1	49970914	1056
ENSMUSG00000114571	processed_pseudogene	Gm35595	ENSMUST00000223790	processed_pseudogene		14	-1	62541575	196
ENSMUSG00000033540	protein_coding	Idua	ENSMUST00000112563	protein_coding	principal1	5	1	108669106	3373
ENSMUSG00000051736	protein_coding	Fam229b	ENSMUST00000135785	protein_coding	principal1	10	-1	39133914	674
ENSMUSG00000082207	processed_pseudogene	Gm12998	ENSMUST00000122445	processed_pseudogene		4	-1	116946534	789
ENSMUSG00000020811	protein_coding	Wscd1	ENSMUST00000132095	processed_transcript		11	1	71768676	642
ENSMUSG00000101073	protein_coding	Vmn1r200	ENSMUST00000226157	protein_coding	principal2	13	1	22390373	5505
ENSMUSG00000089655	antisense	Gm16004	ENSMUST00000161981	antisense		9	1	99708399	311
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000171978	processed_transcript		17	-1	45588741	736
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000171081	protein_coding		17	-1	45595502	862
ENSMUSG00000051736	protein_coding	Fam229b	ENSMUST00000125042	protein_coding		10	-1	39133900	707
ENSMUSG00000027409	protein_coding	1700020A23Rik	ENSMUST00000110281	protein_coding	principal1	2	1	130405259	521
ENSMUSG00000100580	lincRNA	4933436I20Rik	ENSMUST00000189405	lincRNA		1	-1	83911571	1434
ENSMUSG00000027820	protein_coding	Mme	ENSMUST00000194150	protein_coding	principal1	3	1	63295561	3345
ENSMUSG00000076556	IG_V_gene	Igkv4-57	ENSMUST00000103357	IG_V_gene	principal1	6	-1	69576500	352
ENSMUSG00000110929	lincRNA	Gm47757	ENSMUST00000216324	lincRNA		9	-1	99858313	721
ENSMUSG00000051736	protein_coding	Fam229b	ENSMUST00000154981	retained_intron		10	-1	39133857	2884
ENSMUSG00000100580	lincRNA	4933436I20Rik	ENSMUST00000190615	lincRNA		1	-1	83911644	1509
ENSMUSG00000101073	protein_coding	Vmn1r200	ENSMUST00000227326	protein_coding	alternative2	13	1	22390373	5449
ENSMUSG00000047117	protein_coding	Ankdd1b	ENSMUST00000181276	processed_transcript		13	-1	96436625	2554
ENSMUSG00000027409	protein_coding	1700020A23Rik	ENSMUST00000189961	protein_coding	principal1	2	1	130405265	541
ENSMUSG00000090497	TEC	Gm17611	ENSMUST00000220613	TEC		13	-1	49977074	814
ENSMUSG00000101073	protein_coding	Vmn1r200	ENSMUST00000226901	retained_intron		13	1	22390373	6107
ENSMUSG00000090497	TEC	Gm17611	ENSMUST00000167414	TEC		13	-1	49976488	231
ENSMUSG00000106546	IG_V_pseudogene	Igkv13-56-1	ENSMUST00000198481	IG_V_pseudogene		6	1	69581244	209
ENSMUSG00000107543	transcribed_processed_pseudogene	Gm34701	ENSMUST00000204213	processed_transcript		6	-1	42106548	849
ENSMUSG00000107543	transcribed_processed_pseudogene	Gm34701	ENSMUST00000204685	transcribed_processed_pseudogene		6	-1	42106467	360
ENSMUSG00000000902	protein_coding	Smarcb1	ENSMUST00000000925	protein_coding	principal3	10	-1	75921617	1660
ENSMUSG00000101073	protein_coding	Vmn1r200	ENSMUST00000228726	protein_coding	principal2	13	1	22390373	5525
ENSMUSG00000085782	antisense	Gm15624	ENSMUST00000154953	antisense		6	-1	83172733	713
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000164217	protein_coding		17	-1	45595602	1062
ENSMUSG00000085782	antisense	Gm15624	ENSMUST00000204811	antisense		6	-1	83172755	3402
ENSMUSG00000113963	processed_pseudogene	Gm6554	ENSMUST00000220592	processed_pseudogene		13	-1	50002258	1912
ENSMUSG00000047102	protein_coding	Tas2r139	ENSMUST00000057686	protein_coding	principal1	6	1	42140936	960
ENSMUSG00000053747	protein_coding	Sox14	ENSMUST00000054819	protein_coding	principal1	9	-1	99876170	2065
ENSMUSG00000101073	protein_coding	Vmn1r200	ENSMUST00000074324	protein_coding	principal2	13	1	22394947	1063
ENSMUSG00000113312	processed_pseudogene	Gm48052	ENSMUST00000220549	processed_pseudogene		13	-1	50051005	293
ENSMUSG00000085782	antisense	Gm15624	ENSMUST00000145420	antisense		6	-1	83172554	1405
ENSMUSG00000027820	protein_coding	Mme	ENSMUST00000194134	protein_coding	principal1	3	1	63295872	8039
ENSMUSG00000027409	protein_coding	1700020A23Rik	ENSMUST00000028898	protein_coding	principal1	2	1	130405286	712
ENSMUSG00000053747	protein_coding	Sox14	ENSMUST00000183065	protein_coding		9	-1	99875655	1274
ENSMUSG00000106016	IG_V_pseudogene	Igkv4-56	ENSMUST00000198436	IG_V_pseudogene		6	-1	69587810	349
ENSMUSG00000099631	processed_pseudogene	Gm8641	ENSMUST00000186995	processed_pseudogene		9	-1	99947389	826
ENSMUSG00000051917	protein_coding	Tas2r144	ENSMUST00000063489	protein_coding	principal1	6	1	42215328	960
ENSMUSG00000000902	protein_coding	Smarcb1	ENSMUST00000133189	retained_intron		10	-1	75914162	3607
ENSMUSG00000046959	protein_coding	Slc26a1	ENSMUST00000051757	protein_coding	principal3	5	-1	108675569	3812
ENSMUSG00000027820	protein_coding	Mme	ENSMUST00000029400	protein_coding	principal1	3	1	63296095	3782
ENSMUSG00000100963	protein_coding	Gm28372	ENSMUST00000188900	protein_coding	principal1	2	1	130405239	1876
ENSMUSG00000113064	lincRNA	Gm40394	ENSMUST00000221321	lincRNA		12	1	36877965	633
ENSMUSG00000101584	lincRNA	4930519F24Rik	ENSMUST00000185764	lincRNA		9	1	100022300	579
ENSMUSG00000115155	TEC	Gm49182	ENSMUST00000226657	TEC		15	1	20584781	1973
ENSMUSG00000027820	protein_coding	Mme	ENSMUST00000192002	protein_coding		3	1	63297052	629
ENSMUSG00000101584	lincRNA	4930519F24Rik	ENSMUST00000215896	lincRNA		9	1	100023648	342
ENSMUSG00000000902	protein_coding	Smarcb1	ENSMUST00000140408	retained_intron		10	-1	75916572	7441
ENSMUSG00000046959	protein_coding	Slc26a1	ENSMUST00000119270	protein_coding	alternative2	5	-1	108674753	3031
ENSMUSG00000047117	protein_coding	Ankdd1b	ENSMUST00000239137	nonsense_mediated_decay		13	-1	96471160	3003
ENSMUSG00000027820	protein_coding	Mme	ENSMUST00000193805	retained_intron		3	1	63300160	3543
ENSMUSG00000040452	protein_coding	Cdh12	ENSMUST00000226407	processed_transcript		15	1	20449265	404
ENSMUSG00000103407	TEC	4930540E01Rik	ENSMUST00000192569	TEC		9	-1	100174146	1146
ENSMUSG00000046959	protein_coding	Slc26a1	ENSMUST00000136227	protein_coding		5	-1	108674785	1400
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000171876	retained_intron		17	-1	45592840	2007
ENSMUSG00000101042	lincRNA	Gm28167	ENSMUST00000187644	lincRNA		9	-1	100323524	550
ENSMUSG00000050150	protein_coding	Slc9b1	ENSMUST00000159658	protein_coding		3	1	135348029	588
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000167806	protein_coding		11	-1	97280486	2307
ENSMUSG00000049692	protein_coding	Tmem239	ENSMUST00000055421	protein_coding	principal1	2	1	130406478	1291
ENSMUSG00000071510	protein_coding	Olfr172	ENSMUST00000214139	protein_coding	principal1	16	-1	58763176	1778
ENSMUSG00000046959	protein_coding	Slc26a1	ENSMUST00000163328	protein_coding	principal3	5	-1	108674753	3015
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000167748	retained_intron		17	-1	45590111	769
ENSMUSG00000071510	protein_coding	Olfr172	ENSMUST00000095991	protein_coding	principal1	16	-1	58761240	1089
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000167863	retained_intron		17	-1	45595551	944
ENSMUSG00000101026	protein_coding	Ly6g6g	ENSMUST00000186014	protein_coding		15	-1	74778824	1559
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000170425	retained_intron		17	-1	45595515	907
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000166633	protein_coding		17	-1	45599604	873
ENSMUSG00000101026	protein_coding	Ly6g6g	ENSMUST00000191407	protein_coding	principal1	15	-1	74778859	1494
ENSMUSG00000030162	protein_coding	Olr1	ENSMUST00000032265	protein_coding	principal3	6	-1	129507165	3572
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000164618	protein_coding		17	-1	45595852	598
ENSMUSG00000049362	protein_coding	Olfr173	ENSMUST00000206205	protein_coding	principal1	16	-1	58800268	2778
ENSMUSG00000033458	protein_coding	Fan1	ENSMUST00000163289	protein_coding	principal1	7	-1	64374080	3460
ENSMUSG00000000902	protein_coding	Smarcb1	ENSMUST00000121304	protein_coding	alternative1	10	-1	75921614	1622
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000163905	protein_coding		17	-1	45593634	837
ENSMUSG00000049362	protein_coding	Olfr173	ENSMUST00000049940	protein_coding	principal1	16	-1	58797942	1164
ENSMUSG00000008393	protein_coding	Carhsp1	ENSMUST00000008537	protein_coding	principal1	16	-1	8672155	2858
ENSMUSG00000030162	protein_coding	Olr1	ENSMUST00000183258	protein_coding	alternative2	6	-1	129507107	468
ENSMUSG00000030162	protein_coding	Olr1	ENSMUST00000182784	protein_coding	alternative2	6	-1	129507107	570
ENSMUSG00000000902	protein_coding	Smarcb1	ENSMUST00000140388	nonsense_mediated_decay		10	-1	75921589	960
ENSMUSG00000016477	protein_coding	E2f3	ENSMUST00000221536	protein_coding	principal5	13	-1	29984391	4597
ENSMUSG00000030162	protein_coding	Olr1	ENSMUST00000203564	protein_coding	alternative2	6	-1	129496873	418
ENSMUSG00000033458	protein_coding	Fan1	ENSMUST00000206778	retained_intron		7	-1	64373373	2499
ENSMUSG00000000902	protein_coding	Smarcb1	ENSMUST00000146555	nonsense_mediated_decay		10	-1	75915164	427
ENSMUSG00000030162	protein_coding	Olr1	ENSMUST00000162815	protein_coding		6	-1	129507165	350
ENSMUSG00000033458	protein_coding	Fan1	ENSMUST00000206329	retained_intron		7	-1	64374095	3162
ENSMUSG00000016477	protein_coding	E2f3	ENSMUST00000222730	protein_coding	alternative1	13	-1	29984391	4579
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000169729	protein_coding		17	-1	45599606	543
ENSMUSG00000102003	processed_pseudogene	Gm28666	ENSMUST00000186649	processed_pseudogene		7	-1	48095391	274
ENSMUSG00000033458	protein_coding	Fan1	ENSMUST00000206730	retained_intron		7	-1	64374041	3130
ENSMUSG00000090319	processed_pseudogene	Gm4462	ENSMUST00000166453	processed_pseudogene		16	1	20663754	1303
ENSMUSG00000040452	protein_coding	Cdh12	ENSMUST00000227496	protein_coding	principal1	15	1	21110125	6004
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000167195	protein_coding		17	-1	45595556	459
ENSMUSG00000016477	protein_coding	E2f3	ENSMUST00000102948	protein_coding		13	-1	29986063	5097
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000172301	protein_coding		17	-1	45595502	520
ENSMUSG00000040452	protein_coding	Cdh12	ENSMUST00000075132	protein_coding	principal1	15	1	21111452	5636
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000167332	protein_coding		17	-1	45595541	626
ENSMUSG00000044678	protein_coding	Ly6k	ENSMUST00000168815	protein_coding	principal1	15	-1	74799533	612
ENSMUSG00000016477	protein_coding	E2f3	ENSMUST00000146092	processed_transcript		13	-1	29984241	389
ENSMUSG00000103296	TEC	Gm38234	ENSMUST00000195204	TEC		15	1	21180157	421
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000111051	protein_coding	alternative1	2	1	109675897	4125
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000172108	protein_coding	alternative2	11	-1	97280570	2924
ENSMUSG00000115631	processed_pseudogene	Gm19371	ENSMUST00000227599	processed_pseudogene		15	1	21049389	288
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000170488	protein_coding		17	-1	45595543	348
ENSMUSG00000099751	lincRNA	1700022A22Rik	ENSMUST00000187130	lincRNA		15	1	46324559	1458
ENSMUSG00000115122	antisense	Gm49685	ENSMUST00000227439	antisense		15	1	20449119	671
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000111047	protein_coding	alternative1	2	1	109675897	4042
ENSMUSG00000025572	protein_coding	Tmc6	ENSMUST00000026659	protein_coding	principal1	11	-1	117780639	2865
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000170113	protein_coding		17	-1	45595957	403
ENSMUSG00000099751	lincRNA	1700022A22Rik	ENSMUST00000185294	lincRNA		15	1	46324571	805
ENSMUSG00000047117	protein_coding	Ankdd1b	ENSMUST00000055607	protein_coding	principal5	13	-1	96471267	3214
ENSMUSG00000107825	antisense	Gm44296	ENSMUST00000204689	antisense		6	-1	30735924	681
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000001569	protein_coding	principal1	17	1	35823230	1825
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000168274	protein_coding		17	-1	45597066	357
ENSMUSG00000044678	protein_coding	Ly6k	ENSMUST00000060301	protein_coding	principal1	15	-1	74799986	791
ENSMUSG00000115122	antisense	Gm49685	ENSMUST00000228652	antisense		15	1	20449190	1929
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000111049	protein_coding	alternative1	2	1	109675897	3830
ENSMUSG00000025572	protein_coding	Tmc6	ENSMUST00000148220	retained_intron		11	-1	117769073	494
ENSMUSG00000099751	lincRNA	1700022A22Rik	ENSMUST00000189172	lincRNA		15	1	46324585	863
ENSMUSG00000047117	protein_coding	Ankdd1b	ENSMUST00000181822	retained_intron		13	-1	96435986	1886
ENSMUSG00000023942	protein_coding	Slc29a1	ENSMUST00000051574	protein_coding	alternative2	17	-1	45595572	1996
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000174080	protein_coding		17	1	35823347	1383
ENSMUSG00000038644	protein_coding	Pold1	ENSMUST00000049343	protein_coding	principal1	7	-1	44548847	3454
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000141130	protein_coding		6	1	30723547	341
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000111046	protein_coding	alternative1	2	1	109677032	3819
ENSMUSG00000025572	protein_coding	Tmc6	ENSMUST00000149589	nonsense_mediated_decay		11	-1	117773043	856
ENSMUSG00000047117	protein_coding	Ankdd1b	ENSMUST00000181761	protein_coding		13	-1	96435952	985
ENSMUSG00000047565	protein_coding	Acot10	ENSMUST00000052910	protein_coding	principal1	15	-1	20666750	1537
ENSMUSG00000091709	antisense	Gm17189	ENSMUST00000163707	antisense		15	1	74784065	1630
ENSMUSG00000067389	antisense	Gm17080	ENSMUST00000087588	antisense		17	1	45586120	811
ENSMUSG00000047117	protein_coding	Ankdd1b	ENSMUST00000238922	nonsense_mediated_decay		13	-1	96471198	1017
ENSMUSG00000060663	protein_coding	Olfr175	ENSMUST00000215069	protein_coding	principal1	16	-1	58826774	1201
ENSMUSG00000024319	protein_coding	Vps52	ENSMUST00000025178	protein_coding	principal1	17	1	33955812	3383
ENSMUSG00000047117	protein_coding	Ankdd1b	ENSMUST00000239026	protein_coding	alternative2	13	-1	96471111	1566
ENSMUSG00000104695	processed_pseudogene	Gm30023	ENSMUST00000197970	processed_pseudogene		3	1	94453169	889
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000111050	protein_coding	alternative1	2	1	109692436	3965
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000001480	protein_coding	principal2	11	-1	97280638	4215
ENSMUSG00000047117	protein_coding	Ankdd1b	ENSMUST00000181074	retained_intron		13	-1	96446017	455
ENSMUSG00000025956	protein_coding	Mettl21a	ENSMUST00000114079	protein_coding	principal1	1	-1	64617242	2030
ENSMUSG00000047117	protein_coding	Ankdd1b	ENSMUST00000181613	protein_coding		13	-1	96471198	704
ENSMUSG00000095426	TR_V_gene	Trav6d-5	ENSMUST00000180687	TR_V_gene	principal1	14	1	52795165	338
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000176893	protein_coding	alternative1	2	1	109693027	3707
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000173628	nonsense_mediated_decay		17	1	35823382	948
ENSMUSG00000024319	protein_coding	Vps52	ENSMUST00000173196	protein_coding		17	1	33955915	2014
ENSMUSG00000103110	unprocessed_pseudogene	Gm37586	ENSMUST00000193654	unprocessed_pseudogene		1	1	169853548	204
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000174227	retained_intron		17	1	35823426	405
ENSMUSG00000060663	protein_coding	Olfr175	ENSMUST00000079955	protein_coding	principal1	16	-1	58826782	1169
ENSMUSG00000025956	protein_coding	Mettl21a	ENSMUST00000053469	protein_coding	principal1	1	-1	64617168	2666
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000173493	protein_coding		17	1	35823526	697
ENSMUSG00000090024	antisense	Gm16350	ENSMUST00000162958	antisense		8	-1	14961586	446
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000107608	retained_intron		11	-1	97212462	544
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000111045	protein_coding	alternative1	2	1	109693563	3973
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000173147	protein_coding		17	1	35823549	651
ENSMUSG00000050150	protein_coding	Slc9b1	ENSMUST00000078568	protein_coding	principal1	3	1	135348034	2248
ENSMUSG00000038644	protein_coding	Pold1	ENSMUST00000154783	retained_intron		7	-1	44533918	532
ENSMUSG00000094792	TR_V_gene	Trav10d	ENSMUST00000103646	TR_V_gene	principal1	14	1	52810934	406
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000082094	protein_coding	principal1	6	-1	71908750	2581
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000172846	protein_coding		17	1	35823593	805
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000111043	protein_coding	alternative1	2	1	109694409	3839
ENSMUSG00000025956	protein_coding	Mettl21a	ENSMUST00000161264	processed_transcript		1	-1	64617184	372
ENSMUSG00000050150	protein_coding	Slc9b1	ENSMUST00000160047	retained_intron		3	1	135348046	1196
ENSMUSG00000025956	protein_coding	Mettl21a	ENSMUST00000162806	processed_transcript		1	-1	64615631	487
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000173337	retained_intron		17	1	35823996	538
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000111044	protein_coding	alternative1	2	1	109694469	3854
ENSMUSG00000050150	protein_coding	Slc9b1	ENSMUST00000160941	retained_intron		3	1	135348046	1407
ENSMUSG00000109101	TEC	Gm45132	ENSMUST00000207234	TEC		7	-1	98680647	2542
ENSMUSG00000048482	protein_coding	Bdnf	ENSMUST00000111042	protein_coding		2	1	109709383	3905
ENSMUSG00000025373	protein_coding	Rnf41	ENSMUST00000171342	protein_coding	principal1	10	1	128411657	3283
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000173381	retained_intron		17	1	35830086	502
ENSMUSG00000024903	protein_coding	Lao1	ENSMUST00000058651	protein_coding	principal1	4	1	118961578	2349
ENSMUSG00000093410	processed_transcript	Gm20638	ENSMUST00000175796	processed_transcript		2	1	109673166	550
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000173273	retained_intron		17	1	35830499	592
ENSMUSG00000109604	antisense	Gm45346	ENSMUST00000209925	antisense		2	-1	109676591	1273
ENSMUSG00000059714	protein_coding	Flot1	ENSMUST00000174297	retained_intron		17	1	35830638	682
ENSMUSG00000045827	protein_coding	Serpinb9	ENSMUST00000063191	protein_coding	principal1	13	1	33003250	3472
ENSMUSG00000083499	processed_pseudogene	Gm14609	ENSMUST00000122176	processed_pseudogene		X	-1	47381334	902
ENSMUSG00000025373	protein_coding	Rnf41	ENSMUST00000217826	nonsense_mediated_decay		10	1	128411713	1984
ENSMUSG00000082426	processed_pseudogene	Gm14610	ENSMUST00000118358	processed_pseudogene		X	-1	47387985	966
ENSMUSG00000084257	unprocessed_pseudogene	Gm11597	ENSMUST00000121423	unprocessed_pseudogene		11	-1	100232078	964
ENSMUSG00000024903	protein_coding	Lao1	ENSMUST00000142457	processed_transcript		4	1	118965375	798
ENSMUSG00000083094	processed_pseudogene	Gm4908	ENSMUST00000121923	processed_pseudogene		X	1	47471808	1005
ENSMUSG00000086477	transcribed_unitary_pseudogene	Gm15506	ENSMUST00000148776	processed_transcript		7	-1	98702928	1133
ENSMUSG00000084348	processed_pseudogene	Gm14608	ENSMUST00000120030	processed_pseudogene		X	1	47586018	1553
ENSMUSG00000050150	protein_coding	Slc9b1	ENSMUST00000160460	processed_transcript		3	1	135348058	2072
ENSMUSG00000086477	transcribed_unitary_pseudogene	Gm15506	ENSMUST00000208646	processed_transcript		7	-1	98702888	3664
ENSMUSG00000050150	protein_coding	Slc9b1	ENSMUST00000162767	retained_intron		3	1	135348330	1545
ENSMUSG00000086477	transcribed_unitary_pseudogene	Gm15506	ENSMUST00000238534	transcribed_unitary_pseudogene		7	-1	98702434	563
ENSMUSG00000045827	protein_coding	Serpinb9	ENSMUST00000006391	protein_coding	principal1	13	1	33004541	3397
ENSMUSG00000050150	protein_coding	Slc9b1	ENSMUST00000161506	retained_intron		3	1	135372922	492
ENSMUSG00000025373	protein_coding	Rnf41	ENSMUST00000096386	protein_coding	principal1	10	1	128411746	3144
ENSMUSG00000023017	protein_coding	Asic1	ENSMUST00000023758	protein_coding	principal1	15	1	99670368	4114
ENSMUSG00000113507	lincRNA	Gm48613	ENSMUST00000222465	lincRNA		12	-1	36952555	1688
ENSMUSG00000113507	lincRNA	Gm48613	ENSMUST00000223106	lincRNA		12	-1	36952555	1557
ENSMUSG00000101832	lincRNA	Gm28982	ENSMUST00000186895	lincRNA		1	1	64617784	512
ENSMUSG00000024319	protein_coding	Vps52	ENSMUST00000234201	nonsense_mediated_decay		17	1	33955945	553
ENSMUSG00000112974	processed_pseudogene	Gm18026	ENSMUST00000222789	processed_pseudogene		12	-1	36969150	727
ENSMUSG00000023017	protein_coding	Asic1	ENSMUST00000226291	retained_intron		15	1	99672113	715
ENSMUSG00000050150	protein_coding	Slc9b1	ENSMUST00000161417	nonsense_mediated_decay		3	1	135382750	783
ENSMUSG00000047371	protein_coding	Zfp768	ENSMUST00000060783	protein_coding	principal2	7	-1	127345423	2356
ENSMUSG00000038644	protein_coding	Pold1	ENSMUST00000138746	retained_intron		7	-1	44548849	3496
ENSMUSG00000025373	protein_coding	Rnf41	ENSMUST00000218371	nonsense_mediated_decay		10	1	128415178	1594
ENSMUSG00000025572	protein_coding	Tmc6	ENSMUST00000103025	retained_intron		11	-1	117780621	1279
ENSMUSG00000100437	lincRNA	Gm29152	ENSMUST00000189284	lincRNA		1	1	64649935	325
ENSMUSG00000050150	protein_coding	Slc9b1	ENSMUST00000159276	processed_transcript		3	1	135394004	294
ENSMUSG00000023017	protein_coding	Asic1	ENSMUST00000228012	retained_intron		15	1	99672667	638
ENSMUSG00000024319	protein_coding	Vps52	ENSMUST00000173318	retained_intron		17	1	33958057	785
ENSMUSG00000024319	protein_coding	Vps52	ENSMUST00000173445	retained_intron		17	1	33959009	659
ENSMUSG00000103087	TEC	Gm38122	ENSMUST00000192679	TEC		1	-1	189640234	885
ENSMUSG00000070532	protein_coding	Ccdc190	ENSMUST00000094348	protein_coding	principal3	1	1	169928648	1731
ENSMUSG00000047371	protein_coding	Zfp768	ENSMUST00000205266	protein_coding	alternative2	7	-1	127345589	2513
ENSMUSG00000038644	protein_coding	Pold1	ENSMUST00000136225	retained_intron		7	-1	44535091	1237
ENSMUSG00000022711	protein_coding	Pmm2	ENSMUST00000023396	protein_coding	principal1	16	1	8637674	1842
ENSMUSG00000023017	protein_coding	Asic1	ENSMUST00000228185	protein_coding		15	1	99692233	1818
ENSMUSG00000025572	protein_coding	Tmc6	ENSMUST00000143406	protein_coding		11	-1	117779650	940
ENSMUSG00000024319	protein_coding	Vps52	ENSMUST00000172558	retained_intron		17	1	33961111	1212
ENSMUSG00000038644	protein_coding	Pold1	ENSMUST00000151793	nonsense_mediated_decay		7	-1	44548838	3302
ENSMUSG00000024319	protein_coding	Vps52	ENSMUST00000234673	processed_transcript		17	1	33961748	135
ENSMUSG00000025572	protein_coding	Tmc6	ENSMUST00000136729	protein_coding		11	-1	117780944	339
ENSMUSG00000082456	processed_pseudogene	Gm11598	ENSMUST00000119257	processed_pseudogene		11	1	100243273	357
ENSMUSG00000038644	protein_coding	Pold1	ENSMUST00000147503	retained_intron		7	-1	44534189	565
ENSMUSG00000070532	protein_coding	Ccdc190	ENSMUST00000175731	protein_coding	alternative2	1	1	169929929	1128
ENSMUSG00000023017	protein_coding	Asic1	ENSMUST00000228610	retained_intron		15	1	99695044	929
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000165489	retained_intron		11	-1	97241866	2078
ENSMUSG00000036282	protein_coding	Naa30	ENSMUST00000153488	protein_coding	principal2	14	1	49172226	4446
ENSMUSG00000025572	protein_coding	Tmc6	ENSMUST00000152304	protein_coding		11	-1	117782198	363
ENSMUSG00000038644	protein_coding	Pold1	ENSMUST00000141742	retained_intron		7	-1	44535958	1226
ENSMUSG00000089990	processed_transcript	Gm15852	ENSMUST00000159701	processed_transcript		1	-1	169934248	915
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000165216	protein_coding		11	-1	97280432	2812
ENSMUSG00000078940	protein_coding	Wfdc11	ENSMUST00000109332	protein_coding	principal1	2	-1	164674087	617
ENSMUSG00000025572	protein_coding	Tmc6	ENSMUST00000127227	protein_coding		11	-1	117780658	308
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000171320	retained_intron		11	-1	97213295	423
ENSMUSG00000038644	protein_coding	Pold1	ENSMUST00000132268	retained_intron		7	-1	44538418	443
ENSMUSG00000036282	protein_coding	Naa30	ENSMUST00000136995	protein_coding		14	1	49173305	486
ENSMUSG00000023017	protein_coding	Asic1	ENSMUST00000227670	processed_transcript		15	1	99695190	2788
ENSMUSG00000078940	protein_coding	Wfdc11	ENSMUST00000167694	protein_coding	principal1	2	-1	164665535	249
ENSMUSG00000038644	protein_coding	Pold1	ENSMUST00000145956	protein_coding		7	-1	44548733	581
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000170506	retained_intron		11	-1	97224761	865
ENSMUSG00000087213	processed_transcript	2810408I11Rik	ENSMUST00000150749	antisense		1	-1	64690659	711
ENSMUSG00000089978	processed_pseudogene	Crb1-ps	ENSMUST00000160441	processed_pseudogene		14	-1	26376172	895
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000133907	retained_intron		11	-1	97232262	782
ENSMUSG00000111258	lincRNA	Gm34397	ENSMUST00000213597	lincRNA		9	-1	100385046	746
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000109294	retained_intron		11	-1	97226780	455
ENSMUSG00000036282	protein_coding	Naa30	ENSMUST00000138478	retained_intron		14	1	49177899	2157
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000147287	retained_intron		11	-1	97235082	426
ENSMUSG00000036282	protein_coding	Naa30	ENSMUST00000134984	retained_intron		14	1	49178523	2944
ENSMUSG00000087213	processed_transcript	2810408I11Rik	ENSMUST00000122813	antisense		1	-1	64690608	435
ENSMUSG00000111258	lincRNA	Gm34397	ENSMUST00000214991	lincRNA		9	-1	100391851	630
ENSMUSG00000087213	processed_transcript	2810408I11Rik	ENSMUST00000186325	retained_intron		1	-1	64690628	1505
ENSMUSG00000022711	protein_coding	Pmm2	ENSMUST00000130885	retained_intron		16	1	8637723	721
ENSMUSG00000067704	protein_coding	Wfdc13	ENSMUST00000088260	protein_coding	principal1	2	1	164685107	1074
ENSMUSG00000071076	protein_coding	Jund	ENSMUST00000095267	protein_coding	principal1	8	1	70698949	1668
ENSMUSG00000111258	lincRNA	Gm34397	ENSMUST00000213192	lincRNA		9	-1	100391907	708
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000152820	processed_transcript		11	-1	97241878	764
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000163164	protein_coding		11	-1	97242783	654
ENSMUSG00000100122	processed_pseudogene	Gm28267	ENSMUST00000191093	processed_pseudogene		9	1	100404495	265
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000206879	nonsense_mediated_decay		6	-1	71908750	2666
ENSMUSG00000080058	antisense	Gm11175	ENSMUST00000211380	antisense		8	-1	70699689	408
ENSMUSG00000022711	protein_coding	Pmm2	ENSMUST00000143174	retained_intron		16	1	8637738	2370
ENSMUSG00000080058	antisense	Gm11175	ENSMUST00000116172	antisense		8	-1	70700080	543
ENSMUSG00000101287	lincRNA	Gm28166	ENSMUST00000187637	lincRNA		9	1	100450322	620
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000205691	retained_intron		6	-1	71889679	2364
ENSMUSG00000036144	protein_coding	Meox2	ENSMUST00000041183	protein_coding	principal1	12	1	37108540	2360
ENSMUSG00000022711	protein_coding	Pmm2	ENSMUST00000230828	protein_coding	principal1	16	1	8637756	1796
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000206762	retained_intron		6	-1	71889604	521
ENSMUSG00000036282	protein_coding	Naa30	ENSMUST00000037362	protein_coding	alternative2	14	1	49172598	4464
ENSMUSG00000110622	protein_coding	Iqcn	ENSMUST00000212436	protein_coding	principal1	8	1	70703457	4584
ENSMUSG00000032680	protein_coding	6820408C15Rik	ENSMUST00000153713	nonsense_mediated_decay		2	1	152427635	1462
ENSMUSG00000101067	lincRNA	Gm29007	ENSMUST00000190633	lincRNA		12	-1	37106789	679
ENSMUSG00000013495	protein_coding	Tmem175	ENSMUST00000146207	protein_coding		5	1	108629770	1686
ENSMUSG00000022711	protein_coding	Pmm2	ENSMUST00000134975	processed_transcript		16	1	8638042	569
ENSMUSG00000114052	lincRNA	Gm48616	ENSMUST00000221210	lincRNA		12	1	37013575	523
ENSMUSG00000022711	protein_coding	Pmm2	ENSMUST00000142935	retained_intron		16	1	8645971	357
ENSMUSG00000021874	lincRNA	4933413J09Rik	ENSMUST00000160661	lincRNA		14	1	26356574	739
ENSMUSG00000113764	sense_intronic	Gm48617	ENSMUST00000222665	sense_intronic		12	1	37049217	1053
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000154372	nonsense_mediated_decay		11	-1	97267631	1239
ENSMUSG00000022711	protein_coding	Pmm2	ENSMUST00000131385	retained_intron		16	1	8648592	673
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000146833	retained_intron		11	-1	97243146	631
ENSMUSG00000021874	lincRNA	4933413J09Rik	ENSMUST00000059648	lincRNA		14	1	26357547	3387
ENSMUSG00000021874	lincRNA	4933413J09Rik	ENSMUST00000159700	lincRNA		14	1	26357580	853
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000205761	retained_intron		6	-1	71908744	2680
ENSMUSG00000017310	protein_coding	Spint4	ENSMUST00000017454	protein_coding	principal1	2	1	164698501	751
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000168743	protein_coding		11	-1	97280408	741
ENSMUSG00000021874	lincRNA	4933413J09Rik	ENSMUST00000022427	lincRNA		14	1	26362631	899
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000205556	nonsense_mediated_decay		6	-1	71897152	588
ENSMUSG00000021874	lincRNA	4933413J09Rik	ENSMUST00000168234	lincRNA		14	1	26364388	648
ENSMUSG00000021874	lincRNA	4933413J09Rik	ENSMUST00000170881	lincRNA		14	1	26364388	459
ENSMUSG00000001240	protein_coding	Ramp2	ENSMUST00000129680	protein_coding	principal2	11	1	101246028	1178
ENSMUSG00000090104	lincRNA	Slmapos2	ENSMUST00000160089	lincRNA		14	1	26389199	2194
ENSMUSG00000043140	protein_coding	Tmem186	ENSMUST00000052505	protein_coding	principal1	16	-1	8637712	3391
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000154917	nonsense_mediated_decay		11	-1	97280470	794
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000206631	retained_intron		6	-1	71895134	949
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000205293	retained_intron		6	-1	71898436	853
ENSMUSG00000074593	protein_coding	Spint5	ENSMUST00000103097	protein_coding	principal2	2	1	164715305	443
ENSMUSG00000001240	protein_coding	Ramp2	ENSMUST00000149006	retained_intron		11	1	101246312	891
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000163950	retained_intron		11	-1	97280554	1413
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000206284	nonsense_mediated_decay		6	-1	71908718	545
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000024260	protein_coding	principal1	9	1	106453842	2035
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000174758	retained_intron		17	-1	33952689	499
ENSMUSG00000103655	lincRNA	Gm37202	ENSMUST00000193679	lincRNA		3	-1	52221997	361
ENSMUSG00000001441	protein_coding	Npepps	ENSMUST00000152546	nonsense_mediated_decay		11	-1	97267623	463
ENSMUSG00000074593	protein_coding	Spint5	ENSMUST00000180193	protein_coding	alternative2	2	1	164715305	443
ENSMUSG00000063884	protein_coding	Ptcd3	ENSMUST00000205420	retained_intron		6	-1	71903471	320
ENSMUSG00000044244	protein_coding	Il20rb	ENSMUST00000098458	protein_coding	principal1	9	-1	100486788	2793
ENSMUSG00000028920	protein_coding	Fbxo42	ENSMUST00000030757	protein_coding	principal1	4	1	141147913	5934
ENSMUSG00000001240	protein_coding	Ramp2	ENSMUST00000128260	nonsense_mediated_decay		11	1	101246391	1478
ENSMUSG00000103170	lincRNA	Gm37170	ENSMUST00000194488	lincRNA		3	1	52198248	1934
ENSMUSG00000113346	lincRNA	Eprn	ENSMUST00000223470	lincRNA		13	-1	73347384	1306
ENSMUSG00000117920	processed_pseudogene	Gm50155	ENSMUST00000235935	processed_pseudogene		19	-1	38385514	327
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000187975	processed_transcript		9	1	106453845	610
ENSMUSG00000086680	antisense	Gm11592	ENSMUST00000133160	antisense		11	1	97280128	637
ENSMUSG00000001240	protein_coding	Ramp2	ENSMUST00000122006	protein_coding		11	1	101246429	899
ENSMUSG00000104055	processed_transcript	Gm38132	ENSMUST00000193358	lincRNA		3	1	52186573	707
ENSMUSG00000118335	processed_pseudogene	Gm18936	ENSMUST00000235630	processed_pseudogene		19	-1	38388103	596
ENSMUSG00000032680	protein_coding	6820408C15Rik	ENSMUST00000128737	protein_coding		2	1	152427662	568
ENSMUSG00000104055	processed_transcript	Gm38132	ENSMUST00000195251	retained_intron		3	1	52186602	752
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000216379	protein_coding		9	1	106453890	597
ENSMUSG00000001240	protein_coding	Ramp2	ENSMUST00000149585	nonsense_mediated_decay		11	1	101246432	957
ENSMUSG00000069844	protein_coding	Sco1	ENSMUST00000108690	protein_coding	alternative2	11	1	67052670	2186
ENSMUSG00000044244	protein_coding	Il20rb	ENSMUST00000136606	retained_intron		9	-1	100466875	2327
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000215656	protein_coding		9	1	106453890	657
ENSMUSG00000028920	protein_coding	Fbxo42	ENSMUST00000146768	processed_transcript		4	1	141147922	579
ENSMUSG00000103726	lincRNA	Gm30074	ENSMUST00000193192	lincRNA		3	-1	52179972	2541
ENSMUSG00000001240	protein_coding	Ramp2	ENSMUST00000151830	protein_coding		11	1	101246567	379
ENSMUSG00000044244	protein_coding	Il20rb	ENSMUST00000136856	processed_transcript		9	-1	100461763	1695
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000214252	protein_coding		9	1	106453899	744
ENSMUSG00000044244	protein_coding	Il20rb	ENSMUST00000125259	retained_intron		9	-1	100461735	1058
ENSMUSG00000001240	protein_coding	Ramp2	ENSMUST00000138229	retained_intron		11	1	101246933	755
ENSMUSG00000001948	protein_coding	Spa17	ENSMUST00000002013	protein_coding	principal1	9	-1	37613722	696
ENSMUSG00000001240	protein_coding	Ramp2	ENSMUST00000107282	protein_coding	alternative2	11	1	101247093	424
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000186519	retained_intron		9	1	106453920	381
ENSMUSG00000001948	protein_coding	Spa17	ENSMUST00000214786	protein_coding		9	-1	37613570	730
ENSMUSG00000069844	protein_coding	Sco1	ENSMUST00000092996	protein_coding	principal2	11	1	67052670	2412
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000185779	protein_coding		9	1	106453933	893
ENSMUSG00000044026	protein_coding	Slc35g1	ENSMUST00000054098	protein_coding	principal1	19	1	38395980	3474
ENSMUSG00000044244	protein_coding	Il20rb	ENSMUST00000152756	processed_transcript		9	-1	100470609	749
ENSMUSG00000028165	protein_coding	Cisd2	ENSMUST00000029815	protein_coding	principal1	3	-1	135423925	3361
ENSMUSG00000001948	protein_coding	Spa17	ENSMUST00000215336	retained_intron		9	-1	37613722	419
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000185831	processed_transcript		9	1	106455684	477
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000190430	protein_coding		9	1	106456097	752
ENSMUSG00000044026	protein_coding	Slc35g1	ENSMUST00000236865	retained_intron		19	1	38396041	1610
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000174745	processed_transcript		17	-1	33955212	536
ENSMUSG00000069844	protein_coding	Sco1	ENSMUST00000136984	processed_transcript		11	1	67053775	575
ENSMUSG00000044244	protein_coding	Il20rb	ENSMUST00000122880	retained_intron		9	-1	100486385	1229
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000190799	retained_intron		9	1	106460395	253
ENSMUSG00000028165	protein_coding	Cisd2	ENSMUST00000120988	protein_coding		3	-1	135423407	1363
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000189099	protein_coding		9	1	106460660	232
ENSMUSG00000069844	protein_coding	Sco1	ENSMUST00000137779	processed_transcript		11	1	67058327	2637
ENSMUSG00000028165	protein_coding	Cisd2	ENSMUST00000196942	retained_intron		3	-1	135423404	3453
ENSMUSG00000028165	protein_coding	Cisd2	ENSMUST00000198784	processed_transcript		3	-1	135423079	641
ENSMUSG00000013495	protein_coding	Tmem175	ENSMUST00000063272	protein_coding	principal1	5	1	108629832	3956
ENSMUSG00000028811	protein_coding	Yars	ENSMUST00000106054	protein_coding	principal1	4	1	129189760	2909
ENSMUSG00000070871	protein_coding	Ccnyl1	ENSMUST00000114077	protein_coding	alternative2	1	1	64690455	3281
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000217405	retained_intron		9	1	106461045	625
ENSMUSG00000028811	protein_coding	Yars	ENSMUST00000128287	retained_intron		4	1	129189902	647
ENSMUSG00000070871	protein_coding	Ccnyl1	ENSMUST00000187170	protein_coding	principal2	1	1	64690822	1506
ENSMUSG00000070871	protein_coding	Ccnyl1	ENSMUST00000187638	protein_coding		1	1	64691183	465
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000185507	nonsense_mediated_decay		9	1	106461056	846
ENSMUSG00000070871	protein_coding	Ccnyl1	ENSMUST00000094898	protein_coding	principal2	1	1	64691345	2923
ENSMUSG00000021850	protein_coding	ccdc198	ENSMUST00000022398	protein_coding	alternative2	14	-1	49245474	1349
ENSMUSG00000013495	protein_coding	Tmem175	ENSMUST00000078323	protein_coding	principal1	5	1	108630002	2374
ENSMUSG00000045658	protein_coding	Pid1	ENSMUST00000168574	protein_coding	principal1	1	-1	84284645	2664
ENSMUSG00000032680	protein_coding	6820408C15Rik	ENSMUST00000039961	protein_coding	principal1	2	1	152415587	1684
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000213156	protein_coding		9	1	106461059	968
ENSMUSG00000028811	protein_coding	Yars	ENSMUST00000133992	nonsense_mediated_decay		4	1	129197115	834
ENSMUSG00000013495	protein_coding	Tmem175	ENSMUST00000120327	protein_coding	principal1	5	1	108630009	1811
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000213201	nonsense_mediated_decay		9	1	106461087	678
ENSMUSG00000050106	protein_coding	Tmc8	ENSMUST00000127080	protein_coding		11	1	117782076	693
ENSMUSG00000022536	protein_coding	Glyr1	ENSMUST00000115844	protein_coding	alternative1	16	-1	5049857	3292
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000174609	protein_coding		17	-1	33955663	527
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000189882	retained_intron		9	1	106461273	289
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000234380	nonsense_mediated_decay		17	-1	33955663	715
ENSMUSG00000053797	protein_coding	Krt16	ENSMUST00000007280	protein_coding	principal1	11	-1	100248902	1565
ENSMUSG00000028811	protein_coding	Yars	ENSMUST00000140708	processed_transcript		4	1	129197234	527
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000190428	protein_coding		9	1	106461298	770
ENSMUSG00000013495	protein_coding	Tmem175	ENSMUST00000200485	retained_intron		5	1	108641680	714
ENSMUSG00000094176	TR_V_gene	Trav6d-6	ENSMUST00000197754	TR_V_gene	principal1	14	1	52821922	344
ENSMUSG00000028811	protein_coding	Yars	ENSMUST00000146106	retained_intron		4	1	129209538	610
ENSMUSG00000045658	protein_coding	Pid1	ENSMUST00000176559	protein_coding		1	-1	84336173	1564
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000213752	nonsense_mediated_decay		9	1	106461369	898
ENSMUSG00000013495	protein_coding	Tmem175	ENSMUST00000198346	processed_transcript		5	1	108644325	792
ENSMUSG00000045658	protein_coding	Pid1	ENSMUST00000175948	processed_transcript		1	-1	84053253	762
ENSMUSG00000031554	protein_coding	Adam5	ENSMUST00000132180	protein_coding		8	-1	24815473	2117
ENSMUSG00000076434	protein_coding	Wfdc3	ENSMUST00000103096	protein_coding	principal1	2	-1	164743312	911
ENSMUSG00000022536	protein_coding	Glyr1	ENSMUST00000023189	protein_coding	principal3	16	-1	5049863	3280
ENSMUSG00000100033	processed_pseudogene	Gm8337	ENSMUST00000187358	processed_pseudogene		1	1	47657693	1938
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000008812	protein_coding	principal1	17	-1	33955677	560
ENSMUSG00000045658	protein_coding	Pid1	ENSMUST00000176720	protein_coding		1	-1	84284423	450
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000185996	processed_transcript		9	1	106461743	314
ENSMUSG00000101996	processed_pseudogene	Gm19206	ENSMUST00000186401	processed_pseudogene		1	-1	47915815	827
ENSMUSG00000045658	protein_coding	Pid1	ENSMUST00000175996	protein_coding		1	-1	84364180	892
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000015596	protein_coding	principal3	17	1	34597862	1370
ENSMUSG00000110694	unprocessed_pseudogene	Gm45782	ENSMUST00000212670	unprocessed_pseudogene		8	1	104785828	366
ENSMUSG00000028811	protein_coding	Yars	ENSMUST00000148619	retained_intron		4	1	129212244	2440
ENSMUSG00000045658	protein_coding	Pid1	ENSMUST00000176822	protein_coding		1	-1	84341110	1119
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000188396	protein_coding		9	1	106461870	924
ENSMUSG00000096973	processed_pseudogene	Gm5974	ENSMUST00000181607	processed_pseudogene		1	-1	48314851	986
ENSMUSG00000022536	protein_coding	Glyr1	ENSMUST00000231132	retained_intron		16	-1	5049857	3222
ENSMUSG00000023495	protein_coding	Pcbp4	ENSMUST00000188448	retained_intron		9	1	106462053	450
ENSMUSG00000028811	protein_coding	Yars	ENSMUST00000137591	processed_transcript		4	1	129212696	921
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000174496	protein_coding	alternative2	17	1	34597862	1347
ENSMUSG00000045658	protein_coding	Pid1	ENSMUST00000177458	protein_coding		1	-1	84284611	2521
ENSMUSG00000076434	protein_coding	Wfdc3	ENSMUST00000109328	protein_coding		2	-1	164745931	726
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000115127	protein_coding		6	1	30723547	382
ENSMUSG00000022536	protein_coding	Glyr1	ENSMUST00000229928	retained_intron		16	-1	5049857	3990
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000172799	processed_transcript		17	-1	33954490	1151
ENSMUSG00000045658	protein_coding	Pid1	ENSMUST00000187992	retained_intron		1	-1	84284623	1431
ENSMUSG00000028811	protein_coding	Yars	ENSMUST00000147248	retained_intron		4	1	129213762	600
ENSMUSG00000022536	protein_coding	Glyr1	ENSMUST00000231063	retained_intron		16	-1	5049863	1344
ENSMUSG00000101934	processed_pseudogene	Gm18304	ENSMUST00000189162	processed_pseudogene		1	1	84168188	546
ENSMUSG00000102750	TEC	Gm37058	ENSMUST00000193393	TEC		1	-1	84134510	1644
ENSMUSG00000054381	protein_coding	Zfp747	ENSMUST00000067425	protein_coding	principal1	7	-1	127376050	2684
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000151777	protein_coding		6	1	30731968	607
ENSMUSG00000101900	unprocessed_pseudogene	Mrgprb12-ps	ENSMUST00000186150	unprocessed_pseudogene		7	1	48096465	949
ENSMUSG00000076434	protein_coding	Wfdc3	ENSMUST00000130227	processed_transcript		2	-1	164745931	1619
ENSMUSG00000102100	unprocessed_pseudogene	Gm18351	ENSMUST00000188646	unprocessed_pseudogene		7	-1	48109728	883
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000174175	retained_intron		17	-1	33955660	632
ENSMUSG00000091735	protein_coding	Gpr62	ENSMUST00000164834	protein_coding	principal1	9	-1	106465938	1977
ENSMUSG00000021850	protein_coding	ccdc198	ENSMUST00000228936	protein_coding	principal2	14	-1	49245428	3444
ENSMUSG00000105981	TEC	2810428J06Rik	ENSMUST00000198336	TEC		3	-1	135427932	2696
ENSMUSG00000101352	processed_pseudogene	Gm28665	ENSMUST00000189269	processed_pseudogene		7	-1	48117441	670
ENSMUSG00000054381	protein_coding	Zfp747	ENSMUST00000205832	protein_coding		7	-1	127376013	618
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000174620	retained_intron		17	-1	33955653	974
ENSMUSG00000030160	protein_coding	Tmem52b	ENSMUST00000032263	protein_coding	principal1	6	1	129512555	2877
ENSMUSG00000086360	antisense	Gm16214	ENSMUST00000143710	antisense		9	1	42022615	1388
ENSMUSG00000032475	protein_coding	Nck1	ENSMUST00000116522	protein_coding	principal1	9	-1	100546134	4476
ENSMUSG00000054381	protein_coding	Zfp747	ENSMUST00000206942	retained_intron		7	-1	127376016	750
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000173323	retained_intron		17	-1	33952541	448
ENSMUSG00000105449	TEC	Gm43379	ENSMUST00000196253	TEC		3	-1	135435888	7726
ENSMUSG00000070551	protein_coding	Mrgprb5	ENSMUST00000094389	protein_coding	principal1	7	-1	48169019	1037
ENSMUSG00000021850	protein_coding	ccdc198	ENSMUST00000148109	nonsense_mediated_decay		14	-1	49245397	800
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000174662	retained_intron		17	-1	33955660	395
ENSMUSG00000105772	TEC	Gm42496	ENSMUST00000197976	TEC		5	-1	128298868	3241
ENSMUSG00000021850	protein_coding	ccdc198	ENSMUST00000227113	protein_coding		14	-1	49245397	798
ENSMUSG00000008668	protein_coding	Rps18	ENSMUST00000172550	processed_transcript		17	-1	33956001	290
ENSMUSG00000085328	unprocessed_pseudogene	Gm17131	ENSMUST00000164420	unprocessed_pseudogene		5	1	127878531	3846
ENSMUSG00000030160	protein_coding	Tmem52b	ENSMUST00000204741	protein_coding		6	1	129512613	1001
ENSMUSG00000032475	protein_coding	Nck1	ENSMUST00000112874	protein_coding		9	-1	100506856	1513
ENSMUSG00000021850	protein_coding	ccdc198	ENSMUST00000130853	protein_coding		14	-1	49245397	790
ENSMUSG00000061331	unprocessed_pseudogene	Gm17132	ENSMUST00000109542	unprocessed_pseudogene		5	1	127877333	1158
ENSMUSG00000030160	protein_coding	Tmem52b	ENSMUST00000204692	retained_intron		6	1	129515807	777
ENSMUSG00000032475	protein_coding	Nck1	ENSMUST00000186591	protein_coding		9	-1	100546122	734
ENSMUSG00000101543	unprocessed_pseudogene	Gm18352	ENSMUST00000189113	unprocessed_pseudogene		7	-1	48183144	902
ENSMUSG00000030160	protein_coding	Tmem52b	ENSMUST00000203160	retained_intron		6	1	129516551	575
ENSMUSG00000011114	protein_coding	Tbrg1	ENSMUST00000117654	protein_coding	principal1	9	-1	37657312	1984
ENSMUSG00000115772	lincRNA	Gm48935	ENSMUST00000228677	lincRNA		14	1	49217779	2101
ENSMUSG00000115772	lincRNA	Gm48935	ENSMUST00000226956	lincRNA		14	1	49218793	569
ENSMUSG00000105857	antisense	Gm42817	ENSMUST00000198962	antisense		5	1	128336777	607
ENSMUSG00000108290	TEC	Gm44120	ENSMUST00000203022	TEC		6	1	129522562	3023
ENSMUSG00000032475	protein_coding	Nck1	ENSMUST00000188670	protein_coding		9	-1	100545731	600
ENSMUSG00000115389	TEC	Gm48936	ENSMUST00000228809	TEC		14	1	49220898	2467
ENSMUSG00000100176	sense_intronic	Gm28586	ENSMUST00000189857	sense_intronic		9	-1	100531071	456
ENSMUSG00000011114	protein_coding	Tbrg1	ENSMUST00000142736	nonsense_mediated_decay		9	-1	37657237	1761
ENSMUSG00000031160	protein_coding	Eras	ENSMUST00000033500	protein_coding	principal1	X	-1	7928607	1077
ENSMUSG00000011114	protein_coding	Tbrg1	ENSMUST00000134711	retained_intron		9	-1	37657158	2294
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000156933	protein_coding	alternative2	2	1	35109492	7189
ENSMUSG00000011114	protein_coding	Tbrg1	ENSMUST00000126062	retained_intron		9	-1	37657168	823
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000113032	protein_coding	principal2	2	1	35109619	7085
ENSMUSG00000070287	protein_coding	Slc35g2	ENSMUST00000093792	protein_coding	principal1	9	-1	100571090	1590
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000123884	protein_coding		2	1	35127381	2116
ENSMUSG00000070287	protein_coding	Slc35g2	ENSMUST00000189478	processed_transcript		9	-1	100552915	502
ENSMUSG00000039278	protein_coding	Pcsk1n	ENSMUST00000041096	protein_coding	principal1	X	1	7919822	2193
ENSMUSG00000030161	protein_coding	Gabarapl1	ENSMUST00000032264	protein_coding	principal1	6	1	129533160	1820
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000113034	protein_coding		2	1	35132234	3148
ENSMUSG00000035781	protein_coding	R3hdm4	ENSMUST00000045628	protein_coding	principal1	10	-1	79917006	1898
ENSMUSG00000028696	protein_coding	Ipp	ENSMUST00000030461	protein_coding	principal1	4	1	116507552	2115
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000150807	protein_coding		2	1	35132258	725
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000113033	protein_coding		2	1	35132258	1817
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000147400	protein_coding		6	1	30733454	646
ENSMUSG00000030161	protein_coding	Gabarapl1	ENSMUST00000204487	protein_coding		6	1	129533200	902
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000171796	protein_coding	principal4	1	-1	93101822	8206
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000201787	protein_coding		2	1	35145096	578
ENSMUSG00000037738	protein_coding	Nek5	ENSMUST00000169834	protein_coding	principal3	8	-1	22125053	2404
ENSMUSG00000030161	protein_coding	Gabarapl1	ENSMUST00000204956	protein_coding	principal1	6	1	129533376	539
ENSMUSG00000035781	protein_coding	R3hdm4	ENSMUST00000219358	retained_intron		10	-1	79912687	699
ENSMUSG00000028696	protein_coding	Ipp	ENSMUST00000106479	protein_coding	principal1	4	1	116507549	2118
ENSMUSG00000034310	protein_coding	Tmem132d	ENSMUST00000044441	protein_coding	principal1	5	-1	128433077	6139
ENSMUSG00000035781	protein_coding	R3hdm4	ENSMUST00000218970	nonsense_mediated_decay		10	-1	79916928	435
ENSMUSG00000037738	protein_coding	Nek5	ENSMUST00000209656	protein_coding	alternative2	8	-1	22125041	2253
ENSMUSG00000030161	protein_coding	Gabarapl1	ENSMUST00000204639	protein_coding		6	1	129533551	527
ENSMUSG00000107997	TEC	Gm44243	ENSMUST00000204323	TEC		6	1	129540221	692
ENSMUSG00000034310	protein_coding	Tmem132d	ENSMUST00000200136	processed_transcript		5	-1	128275879	742
ENSMUSG00000097675	processed_transcript	1700101I11Rik	ENSMUST00000203703	TEC		6	-1	129533817	1868
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000124081	nonsense_mediated_decay		2	1	35160308	801
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000112958	protein_coding		1	-1	93101831	5931
ENSMUSG00000034310	protein_coding	Tmem132d	ENSMUST00000200316	processed_transcript		5	-1	128275817	748
ENSMUSG00000035781	protein_coding	R3hdm4	ENSMUST00000218750	protein_coding		10	-1	79916919	402
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232080	protein_coding		16	1	16870736	1076
ENSMUSG00000104581	TEC	Gm42497	ENSMUST00000197363	TEC		5	-1	128241339	1958
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000130457	retained_intron		2	1	35161731	1215
ENSMUSG00000097675	processed_transcript	1700101I11Rik	ENSMUST00000181594	antisense		6	-1	129533284	896
ENSMUSG00000035781	protein_coding	R3hdm4	ENSMUST00000217976	nonsense_mediated_decay		10	-1	79916919	474
ENSMUSG00000035781	protein_coding	R3hdm4	ENSMUST00000219206	retained_intron		10	-1	79916927	3509
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000143807	retained_intron		2	1	35175248	1397
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000190723	protein_coding	alternative1	1	-1	93101951	6141
ENSMUSG00000037738	protein_coding	Nek5	ENSMUST00000210824	nonsense_mediated_decay		8	-1	22125038	1832
ENSMUSG00000035781	protein_coding	R3hdm4	ENSMUST00000219867	protein_coding		10	-1	79921208	438
ENSMUSG00000037738	protein_coding	Nek5	ENSMUST00000213644	processed_transcript		8	-1	22107893	570
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000113037	protein_coding		2	1	35132234	5970
ENSMUSG00000035781	protein_coding	R3hdm4	ENSMUST00000171416	protein_coding	principal1	10	-1	79917006	1543
ENSMUSG00000108103	lincRNA	Gm44081	ENSMUST00000204406	lincRNA		6	1	112947037	643
ENSMUSG00000057110	protein_coding	Cntrl	ENSMUST00000028237	protein_coding	alternative2	2	1	35109492	7615
ENSMUSG00000050390	protein_coding	C77080	ENSMUST00000106051	protein_coding	alternative2	4	-1	129227911	5049
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000171556	protein_coding	alternative1	1	-1	93101847	5391
ENSMUSG00000035773	protein_coding	Kiss1r	ENSMUST00000219883	retained_intron		10	1	79916971	3663
ENSMUSG00000050390	protein_coding	C77080	ENSMUST00000097873	protein_coding	alternative2	4	-1	129239174	5033
ENSMUSG00000050390	protein_coding	C77080	ENSMUST00000052602	protein_coding	principal3	4	-1	129248443	5187
ENSMUSG00000021893	protein_coding	Capn7	ENSMUST00000022451	protein_coding	principal1	14	1	31336638	3648
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000086819	protein_coding	alternative1	1	-1	93082421	5097
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000188136	nonsense_mediated_decay		1	-1	93024708	581
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000190854	retained_intron		1	-1	93027205	651
ENSMUSG00000031554	protein_coding	Adam5	ENSMUST00000050300	protein_coding	alternative2	8	-1	24824066	2560
ENSMUSG00000030753	protein_coding	Thap12	ENSMUST00000126356	nonsense_mediated_decay		7	1	98703103	1123
ENSMUSG00000049313	protein_coding	Sorl1	ENSMUST00000060989	protein_coding	principal1	9	-1	42124297	10715
ENSMUSG00000050390	protein_coding	C77080	ENSMUST00000145261	protein_coding		4	-1	129261404	414
ENSMUSG00000031554	protein_coding	Adam5	ENSMUST00000130939	processed_transcript		8	-1	24823985	567
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000188493	processed_transcript		1	-1	93101846	570
ENSMUSG00000049313	protein_coding	Sorl1	ENSMUST00000134560	retained_intron		9	-1	41974587	769
ENSMUSG00000031554	protein_coding	Adam5	ENSMUST00000209935	protein_coding	alternative2	8	-1	24824066	2272
ENSMUSG00000050390	protein_coding	C77080	ENSMUST00000146376	protein_coding		4	-1	129227480	472
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000186828	nonsense_mediated_decay		1	-1	93054302	627
ENSMUSG00000028088	protein_coding	Fmo5	ENSMUST00000107050	protein_coding	principal1	3	1	97628804	5197
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000190249	processed_transcript		1	-1	93068758	325
ENSMUSG00000049313	protein_coding	Sorl1	ENSMUST00000148800	retained_intron		9	-1	41984570	654
ENSMUSG00000049313	protein_coding	Sorl1	ENSMUST00000139133	processed_transcript		9	-1	41985834	224
ENSMUSG00000028088	protein_coding	Fmo5	ENSMUST00000029729	protein_coding	principal1	3	1	97628838	2453
ENSMUSG00000030753	protein_coding	Thap12	ENSMUST00000033009	protein_coding	principal1	7	1	98703103	3723
ENSMUSG00000014602	protein_coding	Kif1a	ENSMUST00000186861	protein_coding		1	-1	93101834	528
ENSMUSG00000095088	TR_V_gene	Trav11d	ENSMUST00000103648	TR_V_gene	principal1	14	1	52824357	342
ENSMUSG00000031554	protein_coding	Adam5	ENSMUST00000118419	protein_coding	principal3	8	-1	24824369	2791
ENSMUSG00000028088	protein_coding	Fmo5	ENSMUST00000133017	retained_intron		3	1	97628848	610
ENSMUSG00000030753	protein_coding	Thap12	ENSMUST00000153566	nonsense_mediated_decay		7	1	98703328	607
ENSMUSG00000105393	TR_V_gene	Trav7d-5	ENSMUST00000197128	TR_V_gene	principal1	14	1	52835858	340
ENSMUSG00000030753	protein_coding	Thap12	ENSMUST00000146473	retained_intron		7	1	98709877	670
ENSMUSG00000035773	protein_coding	Kiss1r	ENSMUST00000045529	protein_coding	principal1	10	1	79916971	3163
ENSMUSG00000083230	processed_pseudogene	Gm14158	ENSMUST00000118409	processed_pseudogene		2	1	152457771	308
ENSMUSG00000028088	protein_coding	Fmo5	ENSMUST00000107049	protein_coding	principal1	3	1	97628857	2583
ENSMUSG00000117909	lincRNA	Gm50212	ENSMUST00000237413	lincRNA		19	-1	19276279	552
ENSMUSG00000021893	protein_coding	Capn7	ENSMUST00000143472	nonsense_mediated_decay		14	1	31336675	4613
ENSMUSG00000117909	lincRNA	Gm50212	ENSMUST00000236488	lincRNA		19	-1	19276348	663
ENSMUSG00000050106	protein_coding	Tmc8	ENSMUST00000050874	protein_coding	principal3	11	1	117782297	2577
ENSMUSG00000021893	protein_coding	Capn7	ENSMUST00000152182	nonsense_mediated_decay		14	1	31336707	4662
ENSMUSG00000086847	lincRNA	Tbx3os2	ENSMUST00000135385	lincRNA		5	-1	119691218	1345
ENSMUSG00000118109	lincRNA	Gm41815	ENSMUST00000236214	lincRNA		19	1	19276471	866
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000233392	protein_coding		17	-1	73900407	1768
ENSMUSG00000118109	lincRNA	Gm41815	ENSMUST00000237424	lincRNA		19	1	19276471	952
ENSMUSG00000021893	protein_coding	Capn7	ENSMUST00000228237	retained_intron		14	1	31365556	614
ENSMUSG00000028088	protein_coding	Fmo5	ENSMUST00000140283	processed_transcript		3	1	97628883	848
ENSMUSG00000118167	lincRNA	Gm50216	ENSMUST00000235148	lincRNA		19	-1	19876563	2705
ENSMUSG00000109149	lincRNA	Gm19656	ENSMUST00000208543	lincRNA		7	-1	98728760	4610
ENSMUSG00000029864	protein_coding	Gstk1	ENSMUST00000031897	protein_coding	principal1	6	1	42245935	930
ENSMUSG00000074681	protein_coding	Defb23	ENSMUST00000099206	protein_coding	principal1	2	-1	152464620	624
ENSMUSG00000118150	lincRNA	Gm3728	ENSMUST00000237242	lincRNA		19	-1	20060758	933
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000148450	protein_coding		10	-1	93974508	408
ENSMUSG00000118067	lincRNA	Gm32629	ENSMUST00000236458	lincRNA		19	-1	20123828	654
ENSMUSG00000050106	protein_coding	Tmc8	ENSMUST00000106334	protein_coding	alternative2	11	1	117782315	2644
ENSMUSG00000035773	protein_coding	Kiss1r	ENSMUST00000219745	protein_coding		10	1	79918674	979
ENSMUSG00000107053	lincRNA	1700021F13Rik	ENSMUST00000202665	lincRNA		5	-1	119807869	469
ENSMUSG00000107053	lincRNA	1700021F13Rik	ENSMUST00000202127	lincRNA		5	-1	119807667	360
ENSMUSG00000038387	protein_coding	Rras	ENSMUST00000044111	protein_coding	principal1	7	1	45017961	995
ENSMUSG00000069925	lincRNA	4932416K20Rik	ENSMUST00000212495	lincRNA		8	1	104794928	3006
ENSMUSG00000069925	lincRNA	4932416K20Rik	ENSMUST00000212832	lincRNA		8	1	104795237	3556
ENSMUSG00000108988	lincRNA	Gm44934	ENSMUST00000208941	lincRNA		7	-1	98735081	238
ENSMUSG00000095689	TR_V_gene	Trav12d-1	ENSMUST00000181360	TR_V_gene	principal5	14	1	52844465	436
ENSMUSG00000069925	lincRNA	4932416K20Rik	ENSMUST00000212453	lincRNA		8	1	104796483	2190
ENSMUSG00000050106	protein_coding	Tmc8	ENSMUST00000117781	protein_coding	alternative2	11	1	117782385	2344
ENSMUSG00000029864	protein_coding	Gstk1	ENSMUST00000204088	nonsense_mediated_decay		6	1	42245979	963
ENSMUSG00000069925	lincRNA	4932416K20Rik	ENSMUST00000093229	pseudogene		8	1	104795237	3554
ENSMUSG00000095689	TR_V_gene	Trav12d-1	ENSMUST00000183652	TR_V_gene	alternative2	14	1	52844554	344
ENSMUSG00000038387	protein_coding	Rras	ENSMUST00000210397	nonsense_mediated_decay		7	1	45018083	485
ENSMUSG00000050106	protein_coding	Tmc8	ENSMUST00000119455	protein_coding	alternative2	11	1	117782658	2736
ENSMUSG00000106373	unprocessed_pseudogene	Gm6522	ENSMUST00000197160	unprocessed_pseudogene		3	1	106275200	1203
ENSMUSG00000038387	protein_coding	Rras	ENSMUST00000210895	protein_coding		7	1	45019470	317
ENSMUSG00000105436	unprocessed_pseudogene	Gm43212	ENSMUST00000198208	unprocessed_pseudogene		3	1	106373206	394
ENSMUSG00000050106	protein_coding	Tmc8	ENSMUST00000156458	retained_intron		11	1	117791188	485
ENSMUSG00000029864	protein_coding	Gstk1	ENSMUST00000203174	retained_intron		6	1	42245989	1396
ENSMUSG00000106795	lincRNA	Gm43050	ENSMUST00000201062	lincRNA		5	-1	119832022	2176
ENSMUSG00000101571	processed_pseudogene	Gm6187	ENSMUST00000040649	processed_pseudogene		1	-1	9398687	960
ENSMUSG00000106795	lincRNA	Gm43050	ENSMUST00000238278	lincRNA		5	-1	119832022	2266
ENSMUSG00000076778	TR_V_gene	Trav13d-1	ENSMUST00000103588	TR_V_gene	principal1	14	1	52851290	396
ENSMUSG00000087486	antisense	Gm11723	ENSMUST00000155505	antisense		11	-1	117785055	466
ENSMUSG00000029864	protein_coding	Gstk1	ENSMUST00000204792	processed_transcript		6	1	42246023	591
ENSMUSG00000082689	processed_pseudogene	Gm14156	ENSMUST00000121538	processed_pseudogene		2	1	152467394	483
ENSMUSG00000118473	unitary_pseudogene	Lcn15	ENSMUST00000238611	unitary_pseudogene		2	1	25644097	502
ENSMUSG00000106795	lincRNA	Gm43050	ENSMUST00000201152	lincRNA		5	-1	119831791	754
ENSMUSG00000030019	protein_coding	Fbxl14	ENSMUST00000032094	protein_coding	principal1	6	1	119479668	2963
ENSMUSG00000042816	protein_coding	Gpr151	ENSMUST00000054738	protein_coding	principal1	18	-1	42579652	1772
ENSMUSG00000045589	protein_coding	Frrs1l	ENSMUST00000053681	protein_coding	principal1	4	-1	56990391	6817
ENSMUSG00000031959	protein_coding	Wdr59	ENSMUST00000038193	protein_coding	alternative1	8	-1	111522092	5083
ENSMUSG00000117719	lincRNA	Gm50214	ENSMUST00000235923	lincRNA		18	1	42587341	705
ENSMUSG00000117926	lincRNA	C030004G16Rik	ENSMUST00000237839	lincRNA		18	-1	42622459	1159
ENSMUSG00000117926	lincRNA	C030004G16Rik	ENSMUST00000236808	lincRNA		18	-1	42617924	1025
ENSMUSG00000117882	processed_pseudogene	Gm50213	ENSMUST00000237737	processed_pseudogene		18	-1	42611660	352
ENSMUSG00000045589	protein_coding	Frrs1l	ENSMUST00000128276	nonsense_mediated_decay		4	-1	56990136	3514
ENSMUSG00000046879	protein_coding	Irgm1	ENSMUST00000147151	processed_transcript		11	-1	48871683	3832
ENSMUSG00000031959	protein_coding	Wdr59	ENSMUST00000034437	protein_coding	principal3	8	-1	111522070	4896
ENSMUSG00000025981	protein_coding	Coq10b	ENSMUST00000087617	protein_coding	principal3	1	1	55052770	834
ENSMUSG00000027902	protein_coding	Chil6	ENSMUST00000029510	protein_coding	principal1	3	-1	106406182	1668
ENSMUSG00000030170	protein_coding	Wnt5b	ENSMUST00000117171	protein_coding	principal2	6	-1	119449386	2174
ENSMUSG00000069793	protein_coding	Slfn9	ENSMUST00000038211	protein_coding	principal1	11	-1	82991830	5769
ENSMUSG00000030170	protein_coding	Wnt5b	ENSMUST00000118120	protein_coding	alternative2	6	-1	119467211	2115
ENSMUSG00000046879	protein_coding	Irgm1	ENSMUST00000049519	protein_coding	principal2	11	-1	48871374	2259
ENSMUSG00000031959	protein_coding	Wdr59	ENSMUST00000211981	protein_coding		8	-1	111521987	3618
ENSMUSG00000031959	protein_coding	Wdr59	ENSMUST00000212327	retained_intron		8	-1	111490753	3902
ENSMUSG00000030170	protein_coding	Wnt5b	ENSMUST00000119369	protein_coding	alternative2	6	-1	119544318	2339
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000218583	protein_coding	alternative2	12	1	29528384	4522
ENSMUSG00000069793	protein_coding	Slfn9	ENSMUST00000092840	protein_coding	principal1	11	-1	82991829	3862
ENSMUSG00000114578	processed_pseudogene	Gm47158	ENSMUST00000224215	processed_pseudogene		13	1	99561442	478
ENSMUSG00000049299	protein_coding	Trappc1	ENSMUST00000102602	protein_coding	principal1	11	1	69323980	751
ENSMUSG00000030170	protein_coding	Wnt5b	ENSMUST00000178696	protein_coding	principal2	6	-1	119544347	2371
ENSMUSG00000036449	protein_coding	Lcn8	ENSMUST00000038482	protein_coding	principal1	2	1	25653120	651
ENSMUSG00000103545	TEC	1700012J22Rik	ENSMUST00000193492	TEC		13	1	99641974	830
ENSMUSG00000100866	processed_pseudogene	Gm28830	ENSMUST00000188192	processed_pseudogene		1	1	48527639	213
ENSMUSG00000069793	protein_coding	Slfn9	ENSMUST00000138797	protein_coding		11	-1	82991137	2128
ENSMUSG00000049299	protein_coding	Trappc1	ENSMUST00000102601	protein_coding	principal1	11	1	69324063	759
ENSMUSG00000025981	protein_coding	Coq10b	ENSMUST00000027125	protein_coding	alternative2	1	1	55052770	1733
ENSMUSG00000046879	protein_coding	Irgm1	ENSMUST00000097271	protein_coding	alternative2	11	-1	48871420	2082
ENSMUSG00000049299	protein_coding	Trappc1	ENSMUST00000060956	protein_coding		11	1	69324075	628
ENSMUSG00000049560	protein_coding	Defb20	ENSMUST00000109836	protein_coding	principal1	2	1	152477063	690
ENSMUSG00000025981	protein_coding	Coq10b	ENSMUST00000185474	retained_intron		1	1	55052869	1225
ENSMUSG00000071506	protein_coding	Tmem139	ENSMUST00000238607	retained_intron		6	1	42261959	2595
ENSMUSG00000049299	protein_coding	Trappc1	ENSMUST00000108662	protein_coding		11	1	69324157	635
ENSMUSG00000025981	protein_coding	Coq10b	ENSMUST00000185918	retained_intron		1	1	55059639	2119
ENSMUSG00000049299	protein_coding	Trappc1	ENSMUST00000140555	processed_transcript		11	1	69324438	437
ENSMUSG00000078656	protein_coding	Vps25	ENSMUST00000007533	protein_coding		11	1	101253707	615
ENSMUSG00000101122	processed_pseudogene	Gm17971	ENSMUST00000190239	processed_pseudogene		1	1	55066264	806
ENSMUSG00000108866	lincRNA	Gm35082	ENSMUST00000207308	lincRNA		7	1	100675088	338
ENSMUSG00000103030	TEC	E330011M16Rik	ENSMUST00000193614	TEC		1	-1	55053112	1794
ENSMUSG00000094624	protein_coding	Gm4836	ENSMUST00000179874	protein_coding	principal1	X	-1	28293632	907
ENSMUSG00000108866	lincRNA	Gm35082	ENSMUST00000208164	lincRNA		7	1	100675088	525
ENSMUSG00000038925	protein_coding	E330034G19Rik	ENSMUST00000162224	processed_transcript		14	1	24293214	1350
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000113573	protein_coding	principal1	X	-1	105929403	10275
ENSMUSG00000071506	protein_coding	Tmem139	ENSMUST00000095987	protein_coding	principal1	6	1	42261970	1147
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000143361	retained_intron		X	-1	105802050	743
ENSMUSG00000078656	protein_coding	Vps25	ENSMUST00000042477	protein_coding	principal1	11	1	101253707	1106
ENSMUSG00000006134	protein_coding	Crkl	ENSMUST00000006293	protein_coding	principal1	16	1	17451987	5042
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000138765	retained_intron		X	-1	105803798	468
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000049784	protein_coding	principal4	12	1	29528384	7202
ENSMUSG00000038925	protein_coding	E330034G19Rik	ENSMUST00000163055	processed_transcript		14	1	24293236	761
ENSMUSG00000104014	lincRNA	4930562F17Rik	ENSMUST00000195279	lincRNA		1	1	159134272	960
ENSMUSG00000095356	unprocessed_pseudogene	Gm7398	ENSMUST00000178589	unprocessed_pseudogene		X	1	28447594	639
ENSMUSG00000006134	protein_coding	Crkl	ENSMUST00000231228	protein_coding		16	1	17452039	577
ENSMUSG00000038925	protein_coding	E330034G19Rik	ENSMUST00000160381	retained_intron		14	1	24293284	652
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000219060	retained_intron		12	1	29528401	3179
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232581	protein_coding	principal1	16	1	16870757	2950
ENSMUSG00000078656	protein_coding	Vps25	ENSMUST00000100414	protein_coding		11	1	101253729	1220
ENSMUSG00000061992	processed_pseudogene	Gm4953	ENSMUST00000077309	processed_pseudogene		1	-1	159168642	483
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000219899	retained_intron		12	1	29533385	448
ENSMUSG00000006134	protein_coding	Crkl	ENSMUST00000231629	protein_coding		16	1	17452476	780
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000219231	retained_intron		12	1	29534586	476
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000231812	protein_coding		16	1	16870767	456
ENSMUSG00000104169	unprocessed_pseudogene	Gm7430	ENSMUST00000193824	unprocessed_pseudogene		1	-1	159211141	1144
ENSMUSG00000032900	protein_coding	Tex43	ENSMUST00000035640	protein_coding	principal1	18	1	56588350	565
ENSMUSG00000101721	processed_pseudogene	Gm8354	ENSMUST00000189223	processed_pseudogene		1	-1	48733090	1373
ENSMUSG00000038925	protein_coding	E330034G19Rik	ENSMUST00000239244	processed_transcript		14	1	24293319	1544
ENSMUSG00000078656	protein_coding	Vps25	ENSMUST00000144306	nonsense_mediated_decay		11	1	101253730	361
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000127221	nonsense_mediated_decay		X	-1	105826125	662
ENSMUSG00000038925	protein_coding	E330034G19Rik	ENSMUST00000160710	processed_transcript		14	1	24293332	641
ENSMUSG00000038925	protein_coding	E330034G19Rik	ENSMUST00000239268	transcribed_unprocessed_pseudogene		14	1	24294694	460
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000141609	processed_transcript		X	-1	105829646	735
ENSMUSG00000032900	protein_coding	Tex43	ENSMUST00000127591	protein_coding		18	1	56588379	430
ENSMUSG00000001942	protein_coding	Siae	ENSMUST00000213126	protein_coding	alternative2	9	1	37555698	2306
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000021009	protein_coding	alternative2	12	1	29534615	5027
ENSMUSG00000046323	protein_coding	Dppa3	ENSMUST00000049644	protein_coding	principal1	6	1	122626410	833
ENSMUSG00000032900	protein_coding	Tex43	ENSMUST00000153248	nonsense_mediated_decay		18	1	56588389	420
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000198567	nonsense_mediated_decay		X	-1	105838271	660
ENSMUSG00000078656	protein_coding	Vps25	ENSMUST00000107280	protein_coding		11	1	101253735	876
ENSMUSG00000032900	protein_coding	Tex43	ENSMUST00000147775	protein_coding		18	1	56588426	328
ENSMUSG00000001942	protein_coding	Siae	ENSMUST00000215829	protein_coding		9	1	37613321	662
ENSMUSG00000001942	protein_coding	Siae	ENSMUST00000215678	retained_intron		9	1	37613623	4453
ENSMUSG00000021892	protein_coding	Sh3bp5	ENSMUST00000140002	nonsense_mediated_decay		14	-1	31436078	1686
ENSMUSG00000046323	protein_coding	Dppa3	ENSMUST00000123429	protein_coding		6	1	122626753	691
ENSMUSG00000032900	protein_coding	Tex43	ENSMUST00000235602	processed_transcript		18	1	56590742	633
ENSMUSG00000023018	protein_coding	Smarcd1	ENSMUST00000023759	protein_coding	principal1	15	1	99702129	3307
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000219463	processed_transcript		12	1	29535222	632
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000217961	retained_intron		12	1	29566700	1612
ENSMUSG00000027078	protein_coding	Ube2l6	ENSMUST00000102642	protein_coding	principal1	2	1	84798828	1560
ENSMUSG00000024397	protein_coding	Aif1	ENSMUST00000173281	retained_intron		17	-1	35171858	462
ENSMUSG00000078656	protein_coding	Vps25	ENSMUST00000121331	protein_coding		11	1	101253753	790
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000184846	processed_transcript		17	1	34597875	1252
ENSMUSG00000023018	protein_coding	Smarcd1	ENSMUST00000229236	protein_coding		15	1	99702291	1842
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000218198	protein_coding		12	1	29840210	2735
ENSMUSG00000087122	antisense	4930403D09Rik	ENSMUST00000147359	antisense		11	1	34299707	635
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232017	protein_coding		16	1	16870774	959
ENSMUSG00000027078	protein_coding	Ube2l6	ENSMUST00000150325	protein_coding		2	1	84798834	343
ENSMUSG00000078656	protein_coding	Vps25	ENSMUST00000123529	retained_intron		11	1	101253764	844
ENSMUSG00000027078	protein_coding	Ube2l6	ENSMUST00000154709	processed_transcript		2	1	84802703	1171
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000220072	processed_transcript		12	1	29851548	504
ENSMUSG00000038925	protein_coding	E330034G19Rik	ENSMUST00000161740	protein_coding	principal1	14	1	24293364	1492
ENSMUSG00000021892	protein_coding	Sh3bp5	ENSMUST00000100730	protein_coding	alternative2	14	-1	31417677	2633
ENSMUSG00000023018	protein_coding	Smarcd1	ENSMUST00000228984	protein_coding		15	1	99702594	322
ENSMUSG00000061911	protein_coding	Myt1l	ENSMUST00000219744	protein_coding		12	1	29895114	796
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000155445	retained_intron		X	-1	105846773	942
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000157040	protein_coding	alternative1	6	1	30733506	2383
ENSMUSG00000023018	protein_coding	Smarcd1	ENSMUST00000229845	protein_coding		15	1	99702614	378
ENSMUSG00000041438	protein_coding	Utp4	ENSMUST00000212272	protein_coding		8	1	106893636	373
ENSMUSG00000027078	protein_coding	Ube2l6	ENSMUST00000159150	retained_intron		2	1	84806229	525
ENSMUSG00000118624	transcribed_unprocessed_pseudogene	AC161374.3	ENSMUST00000239329	transcribed_unprocessed_pseudogene		14	1	24306814	300
ENSMUSG00000063137	protein_coding	Olfr177	ENSMUST00000217377	protein_coding	principal1	16	-1	58874768	2401
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000142235	retained_intron		X	-1	105846957	771
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000196998	retained_intron		X	-1	105851814	5431
ENSMUSG00000023018	protein_coding	Smarcd1	ENSMUST00000230530	protein_coding		15	1	99702929	712
ENSMUSG00000063137	protein_coding	Olfr177	ENSMUST00000072853	protein_coding	principal1	16	-1	58873148	930
ENSMUSG00000033326	protein_coding	Kdm4a	ENSMUST00000106406	protein_coding	alternative2	4	-1	118180043	4663
ENSMUSG00000021892	protein_coding	Sh3bp5	ENSMUST00000091903	protein_coding	principal3	14	-1	31436065	2684
ENSMUSG00000103430	processed_pseudogene	Gm36996	ENSMUST00000194466	processed_pseudogene		3	-1	45332410	250
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000023465	protein_coding	principal1	16	1	16870781	3073
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000146193	retained_intron		X	-1	105851526	691
ENSMUSG00000023018	protein_coding	Smarcd1	ENSMUST00000229968	retained_intron		15	1	99703485	810
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000163949	protein_coding	principal3	6	1	30738050	2561
ENSMUSG00000021892	protein_coding	Sh3bp5	ENSMUST00000147586	processed_transcript		14	-1	31407385	382
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000024866	protein_coding	principal1	17	-1	73950182	4600
ENSMUSG00000069911	protein_coding	Insyn2b	ENSMUST00000165963	protein_coding	principal1	11	1	34314758	5435
ENSMUSG00000023018	protein_coding	Smarcd1	ENSMUST00000230748	retained_intron		15	1	99707880	700
ENSMUSG00000115938	processed_pseudogene	Gm17241	ENSMUST00000230504	processed_pseudogene		15	-1	99706813	252
ENSMUSG00000036872	protein_coding	Abcc12	ENSMUST00000129898	nonsense_mediated_decay		8	-1	86580655	5283
ENSMUSG00000033326	protein_coding	Kdm4a	ENSMUST00000097911	protein_coding	alternative2	4	-1	118179654	4550
ENSMUSG00000027276	protein_coding	Jag1	ENSMUST00000028735	protein_coding	principal1	2	-1	137116644	5612
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000123174	retained_intron		X	-1	105875264	1838
ENSMUSG00000116250	antisense	Gm34939	ENSMUST00000229686	antisense		15	-1	99703976	739
ENSMUSG00000029050	protein_coding	Ski	ENSMUST00000129314	processed_transcript		4	-1	155188296	4521
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000198209	protein_coding		X	-1	105875595	1579
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000184805	retained_intron		17	1	34597875	1400
ENSMUSG00000033326	protein_coding	Kdm4a	ENSMUST00000106403	protein_coding	alternative2	4	-1	118179978	4536
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000197302	nonsense_mediated_decay		X	-1	105887823	490
ENSMUSG00000085543	processed_transcript	Gm13568	ENSMUST00000156099	processed_transcript		2	1	26457144	446
ENSMUSG00000001942	protein_coding	Siae	ENSMUST00000215474	protein_coding	principal2	9	1	37613670	4947
ENSMUSG00000069911	protein_coding	Insyn2b	ENSMUST00000093192	protein_coding	principal1	11	1	34314822	5031
ENSMUSG00000027276	protein_coding	Jag1	ENSMUST00000133640	retained_intron		2	-1	137085949	1463
ENSMUSG00000037419	protein_coding	Endod1	ENSMUST00000167549	protein_coding	principal2	9	-1	14381242	4470
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000124665	protein_coding		6	1	30738053	2665
ENSMUSG00000033326	protein_coding	Kdm4a	ENSMUST00000050288	protein_coding	principal3	4	-1	118179946	3279
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000131465	processed_transcript		6	1	30738055	417
ENSMUSG00000028879	protein_coding	Stx12	ENSMUST00000030698	protein_coding	principal1	4	-1	132884509	2934
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232531	retained_intron		16	1	16870786	3508
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000200471	protein_coding		X	-1	105875305	3124
ENSMUSG00000037419	protein_coding	Endod1	ENSMUST00000213403	processed_transcript		9	-1	14381507	1605
ENSMUSG00000001942	protein_coding	Siae	ENSMUST00000217567	retained_intron		9	1	37613827	1498
ENSMUSG00000037419	protein_coding	Endod1	ENSMUST00000214236	protein_coding	alternative2	9	-1	14380983	419
ENSMUSG00000028879	protein_coding	Stx12	ENSMUST00000137109	processed_transcript		4	-1	132863260	662
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232231	protein_coding		16	1	16870787	823
ENSMUSG00000033326	protein_coding	Kdm4a	ENSMUST00000152808	processed_transcript		4	-1	118146759	553
ENSMUSG00000001942	protein_coding	Siae	ENSMUST00000002007	protein_coding	alternative2	9	1	37621654	3339
ENSMUSG00000108257	processed_pseudogene	Gm44251	ENSMUST00000204963	processed_pseudogene		6	-1	129552448	442
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000231576	retained_intron		16	1	16870800	599
ENSMUSG00000033326	protein_coding	Kdm4a	ENSMUST00000164821	processed_transcript		4	-1	118161657	801
ENSMUSG00000001942	protein_coding	Siae	ENSMUST00000213964	protein_coding		9	1	37642680	623
ENSMUSG00000111451	processed_pseudogene	Gm47321	ENSMUST00000213187	processed_pseudogene		9	-1	14385654	878
ENSMUSG00000082894	processed_pseudogene	Gm6480	ENSMUST00000121552	processed_pseudogene		X	1	47724528	1886
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000172757	retained_intron		17	1	34597894	1876
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232200	protein_coding		16	1	16870807	460
ENSMUSG00000050097	protein_coding	Ces2b	ENSMUST00000059449	protein_coding	principal1	8	1	104831572	3408
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000128968	protein_coding		X	-1	105929366	3233
ENSMUSG00000087283	antisense	Gm13580	ENSMUST00000131457	antisense		2	1	60411525	566
ENSMUSG00000102140	TEC	Gm38058	ENSMUST00000194323	TEC		1	1	64736240	4368
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000137521	retained_intron		6	1	30740782	467
ENSMUSG00000101869	lincRNA	Gm29500	ENSMUST00000185992	lincRNA		1	1	163607377	1344
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000174640	retained_intron		17	1	34597894	1663
ENSMUSG00000104736	lincRNA	Gm33609	ENSMUST00000198559	lincRNA		5	1	97143026	2694
ENSMUSG00000081313	processed_pseudogene	Gm14213	ENSMUST00000119778	processed_pseudogene		2	1	121049799	768
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000173551	retained_intron		17	1	34597894	1787
ENSMUSG00000102117	processed_pseudogene	Rpsa-ps1	ENSMUST00000191040	processed_pseudogene		1	1	163623793	886
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000130751	retained_intron		6	1	30742076	487
ENSMUSG00000105850	lincRNA	Gm2861	ENSMUST00000199885	lincRNA		5	1	97195586	666
ENSMUSG00000045648	protein_coding	Vwc2l	ENSMUST00000053922	protein_coding	principal1	1	1	70725715	4655
ENSMUSG00000026675	protein_coding	Hsd17b7	ENSMUST00000027989	protein_coding	principal1	1	-1	169969241	4612
ENSMUSG00000110302	TEC	Gm45295	ENSMUST00000210393	TEC		8	-1	91671897	1046
ENSMUSG00000051855	protein_coding	Mest	ENSMUST00000149496	retained_intron		6	1	30742089	791
ENSMUSG00000050097	protein_coding	Ces2b	ENSMUST00000163042	nonsense_mediated_decay		8	1	104831601	1930
ENSMUSG00000097040	processed_transcript	2610316D01Rik	ENSMUST00000181047	lincRNA		3	-1	45378260	924
ENSMUSG00000045005	protein_coding	Fzd5	ENSMUST00000063982	protein_coding	principal1	1	-1	64737751	6915
ENSMUSG00000045648	protein_coding	Vwc2l	ENSMUST00000159205	retained_intron		1	1	70725752	4191
ENSMUSG00000097040	processed_transcript	2610316D01Rik	ENSMUST00000195225	lincRNA		3	-1	45364670	664
ENSMUSG00000067161	processed_pseudogene	Gm5560	ENSMUST00000086918	processed_pseudogene		5	1	97264828	892
ENSMUSG00000045648	protein_coding	Vwc2l	ENSMUST00000161937	protein_coding		1	1	70725902	4323
ENSMUSG00000099376	processed_pseudogene	Gm19124	ENSMUST00000191041	processed_pseudogene		1	1	48783663	832
ENSMUSG00000097040	processed_transcript	2610316D01Rik	ENSMUST00000191843	retained_intron		3	-1	45378205	667
ENSMUSG00000023019	protein_coding	Gpd1	ENSMUST00000023760	protein_coding	principal1	15	1	99717515	2861
ENSMUSG00000104717	lincRNA	Gm33969	ENSMUST00000197615	lincRNA		5	1	97325904	388
ENSMUSG00000030257	protein_coding	Srgap3	ENSMUST00000088373	protein_coding	principal2	6	-1	112947266	8887
ENSMUSG00000045005	protein_coding	Fzd5	ENSMUST00000116133	protein_coding	principal1	1	-1	64737749	2895
ENSMUSG00000110371	processed_pseudogene	Gm9619	ENSMUST00000211587	processed_pseudogene		8	-1	91689135	762
ENSMUSG00000097883	processed_pseudogene	Gm8357	ENSMUST00000181115	processed_pseudogene		1	1	48881713	1011
ENSMUSG00000026675	protein_coding	Hsd17b7	ENSMUST00000133563	processed_transcript		1	-1	169965723	810
ENSMUSG00000110073	processed_pseudogene	Gm2875	ENSMUST00000211333	processed_pseudogene		8	1	91689753	360
ENSMUSG00000045648	protein_coding	Vwc2l	ENSMUST00000162182	protein_coding		1	1	70725923	1195
ENSMUSG00000023019	protein_coding	Gpd1	ENSMUST00000162194	protein_coding		15	1	99717579	1515
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000198448	protein_coding		X	-1	105929342	1835
ENSMUSG00000026675	protein_coding	Hsd17b7	ENSMUST00000111353	protein_coding		1	-1	169969241	1446
ENSMUSG00000030257	protein_coding	Srgap3	ENSMUST00000113169	protein_coding	alternative1	6	-1	112946754	8300
ENSMUSG00000026675	protein_coding	Hsd17b7	ENSMUST00000123230	processed_transcript		1	-1	169966149	593
ENSMUSG00000023019	protein_coding	Gpd1	ENSMUST00000161768	retained_intron		15	1	99719996	458
ENSMUSG00000104350	TEC	Gm38244	ENSMUST00000191737	TEC		3	1	106478283	2586
ENSMUSG00000046000	protein_coding	Naa11	ENSMUST00000060265	protein_coding	principal1	5	-1	97392379	3424
ENSMUSG00000089671	antisense	Gm16537	ENSMUST00000161529	antisense		15	-1	99724474	702
ENSMUSG00000040113	protein_coding	Mettl11b	ENSMUST00000159679	protein_coding	principal1	1	-1	163725232	1790
ENSMUSG00000029050	protein_coding	Ski	ENSMUST00000084103	protein_coding		4	-1	155222535	5309
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000231278	retained_intron		16	1	16870817	3511
ENSMUSG00000110216	lincRNA	Gm36325	ENSMUST00000210487	lincRNA		8	-1	91714413	2885
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000174554	retained_intron		17	1	34597894	1625
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000170161	retained_intron		17	1	34597894	1468
ENSMUSG00000110304	lincRNA	Gm36380	ENSMUST00000210339	lincRNA		8	-1	91794248	4379
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232547	protein_coding		16	1	16870840	519
ENSMUSG00000095854	TR_V_gene	Trav14d-1	ENSMUST00000181038	TR_V_gene	principal5	14	1	52855614	415
ENSMUSG00000040113	protein_coding	Mettl11b	ENSMUST00000160495	nonsense_mediated_decay		1	-1	163725232	1016
ENSMUSG00000095854	TR_V_gene	Trav14d-1	ENSMUST00000187138	TR_V_gene	alternative2	14	1	52855665	340
ENSMUSG00000029050	protein_coding	Ski	ENSMUST00000030917	protein_coding	principal1	4	-1	155222592	5522
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232380	retained_intron		16	1	16870965	787
ENSMUSG00000089700	processed_pseudogene	Gm2343	ENSMUST00000161177	processed_pseudogene		1	1	163729569	1042
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232117	protein_coding		16	1	16883442	2908
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000173589	retained_intron		17	1	34597894	1461
ENSMUSG00000023020	protein_coding	Cox14	ENSMUST00000023761	protein_coding	principal1	15	1	99725647	2090
ENSMUSG00000097516	lincRNA	4930467D21Rik	ENSMUST00000181724	lincRNA		5	1	97392417	570
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232523	retained_intron		16	1	16884212	1972
ENSMUSG00000015957	protein_coding	Wnt11	ENSMUST00000165122	protein_coding		7	1	98835112	634
ENSMUSG00000097516	lincRNA	4930467D21Rik	ENSMUST00000180634	lincRNA		5	1	97392447	2530
ENSMUSG00000023020	protein_coding	Cox14	ENSMUST00000238530	processed_transcript		15	1	99725677	408
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232656	retained_intron		16	1	16885349	720
ENSMUSG00000044029	protein_coding	Olfr178	ENSMUST00000206523	protein_coding	principal1	16	-1	58892058	2095
ENSMUSG00000027468	protein_coding	Defb22	ENSMUST00000028966	protein_coding	principal1	2	-1	152490138	628
ENSMUSG00000050553	protein_coding	Gk2	ENSMUST00000059657	protein_coding	principal1	5	-1	97457021	1880
ENSMUSG00000015957	protein_coding	Wnt11	ENSMUST00000163913	nonsense_mediated_decay		7	1	98835112	1844
ENSMUSG00000044029	protein_coding	Olfr178	ENSMUST00000215032	protein_coding	principal1	16	-1	58892063	2103
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000231834	retained_intron		16	1	16886644	947
ENSMUSG00000044029	protein_coding	Olfr178	ENSMUST00000058564	protein_coding	principal1	16	-1	58890218	960
ENSMUSG00000080946	processed_pseudogene	Gm12985	ENSMUST00000118376	processed_pseudogene		4	-1	133883127	183
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000232153	retained_intron		16	1	16886910	387
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000134507	protein_coding		X	-1	105929350	1716
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000231432	retained_intron		16	1	16887839	1810
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000173992	protein_coding		17	1	34597894	1248
ENSMUSG00000115785	TEC	Gm6740	ENSMUST00000228343	TEC		14	-1	52862752	1768
ENSMUSG00000085009	antisense	Gm12977	ENSMUST00000133742	antisense		4	1	133871830	942
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000231966	protein_coding		16	1	16890226	461
ENSMUSG00000105061	processed_pseudogene	Gm6740	ENSMUST00000100617	processed_pseudogene		14	-1	52862630	864
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000150914	protein_coding		X	-1	105929370	1920
ENSMUSG00000085009	antisense	Gm12977	ENSMUST00000134799	antisense		4	1	133872482	645
ENSMUSG00000022779	protein_coding	Top3b	ENSMUST00000231402	retained_intron		16	1	16891502	359
ENSMUSG00000030257	protein_coding	Srgap3	ENSMUST00000131835	nonsense_mediated_decay		6	-1	112766937	841
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000134381	protein_coding		X	-1	105929367	1155
ENSMUSG00000030257	protein_coding	Srgap3	ENSMUST00000060215	retained_intron		6	-1	112947266	2482
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000174069	nonsense_mediated_decay		17	1	34597894	1301
ENSMUSG00000030257	protein_coding	Srgap3	ENSMUST00000143475	retained_intron		6	-1	112829459	600
ENSMUSG00000015452	protein_coding	Ager	ENSMUST00000172932	retained_intron		17	1	34597894	1470
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000154866	protein_coding		X	-1	105929359	916
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000199233	protein_coding		X	-1	105929347	754
ENSMUSG00000070550	protein_coding	Mrgprb4	ENSMUST00000094388	protein_coding	principal1	7	-1	48199288	1219
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000133543	retained_intron		X	-1	105880387	545
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000198441	protein_coding		X	-1	105929238	642
ENSMUSG00000032115	protein_coding	Hyou1	ENSMUST00000066601	protein_coding	principal1	9	1	44379490	4432
ENSMUSG00000059305	protein_coding	Vpreb1	ENSMUST00000075017	protein_coding	principal1	16	-1	16869255	766
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000101305	protein_coding		X	-1	105928577	2903
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000137453	protein_coding		X	-1	105929303	644
ENSMUSG00000044071	protein_coding	Tafa2	ENSMUST00000218926	processed_transcript		10	1	123263996	4328
ENSMUSG00000059305	protein_coding	Vpreb1	ENSMUST00000231704	retained_intron		16	-1	16869217	773
ENSMUSG00000059305	protein_coding	Vpreb1	ENSMUST00000232670	processed_transcript		16	-1	16870843	415
ENSMUSG00000041438	protein_coding	Utp4	ENSMUST00000047629	protein_coding	principal1	8	1	106893651	2232
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000138703	protein_coding	principal3	13	-1	6648777	4145
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000130980	protein_coding		X	-1	105929397	720
ENSMUSG00000059305	protein_coding	Vpreb1	ENSMUST00000231345	processed_transcript		16	-1	16870843	406
ENSMUSG00000036872	protein_coding	Abcc12	ENSMUST00000131423	protein_coding	principal1	8	-1	86580686	4893
ENSMUSG00000104072	lincRNA	4930448I06Rik	ENSMUST00000194002	lincRNA		1	-1	41181252	546
ENSMUSG00000053675	protein_coding	Tgm5	ENSMUST00000028721	protein_coding	principal1	2	-1	121085841	2613
ENSMUSG00000031229	protein_coding	Atrx	ENSMUST00000126345	processed_transcript		X	-1	105929346	520
ENSMUSG00000079965	processed_pseudogene	Gm14853	ENSMUST00000116081	processed_pseudogene		X	-1	105845013	549
ENSMUSG00000090500	antisense	Gm17057	ENSMUST00000169887	antisense		15	1	99819020	591
ENSMUSG00000100185	lincRNA	Gm28634	ENSMUST00000191087	lincRNA		1	-1	41529543	2613
ENSMUSG00000032115	protein_coding	Hyou1	ENSMUST00000162560	nonsense_mediated_decay		9	1	44379546	2500
ENSMUSG00000036872	protein_coding	Abcc12	ENSMUST00000156066	nonsense_mediated_decay		8	-1	86534747	2583
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000021614	protein_coding	alternative2	13	-1	6648725	2679
ENSMUSG00000053675	protein_coding	Tgm5	ENSMUST00000142674	retained_intron		2	-1	121085822	1263
ENSMUSG00000100832	lincRNA	Gm29260	ENSMUST00000186391	lincRNA		1	1	41781808	2759
ENSMUSG00000100832	lincRNA	Gm29260	ENSMUST00000187227	lincRNA		1	1	41918352	552
ENSMUSG00000015957	protein_coding	Wnt11	ENSMUST00000067495	protein_coding	principal1	7	1	98835131	3451
ENSMUSG00000111786	lincRNA	Gm47319	ENSMUST00000215810	lincRNA		9	1	14385692	624
ENSMUSG00000100178	processed_pseudogene	Gm5267	ENSMUST00000191574	processed_pseudogene		1	1	42103289	1045
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000142972	protein_coding		13	-1	6587095	550
ENSMUSG00000101877	processed_pseudogene	Gm8176	ENSMUST00000191297	processed_pseudogene		1	-1	42180388	1099
ENSMUSG00000041438	protein_coding	Utp4	ENSMUST00000212718	retained_intron		8	1	106894589	3113
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000154100	nonsense_mediated_decay		13	-1	6597879	706
ENSMUSG00000044071	protein_coding	Tafa2	ENSMUST00000238972	protein_coding	principal1	10	1	123264076	4364
ENSMUSG00000036872	protein_coding	Abcc12	ENSMUST00000131806	nonsense_mediated_decay		8	-1	86566590	4644
ENSMUSG00000044071	protein_coding	Tafa2	ENSMUST00000219723	processed_transcript		10	1	123264985	2986
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000133041	nonsense_mediated_decay		13	-1	6598760	702
ENSMUSG00000103075	TEC	Gm38109	ENSMUST00000195386	TEC		17	1	88533027	181
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000142372	retained_intron		13	-1	6588625	903
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000233162	retained_intron		17	-1	73950145	7775
ENSMUSG00000036872	protein_coding	Abcc12	ENSMUST00000156610	nonsense_mediated_decay		8	-1	86566590	4611
ENSMUSG00000015957	protein_coding	Wnt11	ENSMUST00000167303	protein_coding	principal1	7	1	98838845	1792
ENSMUSG00000108791	lincRNA	1700011D18Rik	ENSMUST00000205762	lincRNA		7	1	78847254	277
ENSMUSG00000036872	protein_coding	Abcc12	ENSMUST00000152438	protein_coding		8	-1	86580686	3083
ENSMUSG00000024397	protein_coding	Aif1	ENSMUST00000172693	protein_coding	principal1	17	-1	35172819	842
ENSMUSG00000044071	protein_coding	Tafa2	ENSMUST00000050756	protein_coding		10	1	123264076	4364
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000233621	nonsense_mediated_decay		17	-1	73950196	4299
ENSMUSG00000111945	processed_pseudogene	Gm19169	ENSMUST00000220109	processed_pseudogene		10	1	123583588	1246
ENSMUSG00000050747	protein_coding	Trim15	ENSMUST00000025329	protein_coding	principal3	17	-1	36867187	1843
ENSMUSG00000015957	protein_coding	Wnt11	ENSMUST00000165240	nonsense_mediated_decay		7	1	98838898	1395
ENSMUSG00000112036	TEC	Gm47801	ENSMUST00000220160	TEC		10	1	123437500	3101
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000232717	processed_transcript		17	-1	73886842	580
ENSMUSG00000032115	protein_coding	Hyou1	ENSMUST00000161537	retained_intron		9	1	44379557	4925
ENSMUSG00000036872	protein_coding	Abcc12	ENSMUST00000080115	protein_coding	principal1	8	-1	86566590	4511
ENSMUSG00000030610	protein_coding	Det1	ENSMUST00000138062	protein_coding		7	-1	78834188	1792
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000233807	retained_intron		17	-1	73886750	481
ENSMUSG00000015957	protein_coding	Wnt11	ENSMUST00000208062	processed_transcript		7	1	98847806	745
ENSMUSG00000050747	protein_coding	Trim15	ENSMUST00000174195	protein_coding	alternative2	17	-1	36867210	1778
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000233352	processed_transcript		17	-1	73895781	840
ENSMUSG00000104336	lincRNA	Gm34240	ENSMUST00000192500	lincRNA		3	1	63439251	1936
ENSMUSG00000091496	processed_pseudogene	Gm8398	ENSMUST00000172081	processed_pseudogene		7	-1	98855095	364
ENSMUSG00000106592	unprocessed_pseudogene	Gm43070	ENSMUST00000196938	unprocessed_pseudogene		3	-1	106553892	415
ENSMUSG00000028863	protein_coding	Meaf6	ENSMUST00000154689	protein_coding	principal1	4	1	125085134	4550
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000233946	processed_transcript		17	-1	73918910	480
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000233433	processed_transcript		17	-1	73948259	534
ENSMUSG00000032115	protein_coding	Hyou1	ENSMUST00000161318	protein_coding	principal1	9	1	44379573	4489
ENSMUSG00000050747	protein_coding	Trim15	ENSMUST00000173639	nonsense_mediated_decay		17	-1	36866746	870
ENSMUSG00000091575	processed_transcript	2010016I18Rik	ENSMUST00000190356	antisense		3	-1	106485913	1562
ENSMUSG00000028863	protein_coding	Meaf6	ENSMUST00000055213	protein_coding		4	1	125085151	872
ENSMUSG00000032115	protein_coding	Hyou1	ENSMUST00000217019	protein_coding		9	1	44379584	561
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000233570	processed_transcript		17	-1	73950138	616
ENSMUSG00000091575	processed_transcript	2010016I18Rik	ENSMUST00000189683	antisense		3	-1	106483834	841
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000232783	nonsense_mediated_decay		17	-1	73950115	527
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000233449	processed_transcript		17	-1	73950092	462
ENSMUSG00000004895	protein_coding	Prcc	ENSMUST00000005015	protein_coding	principal1	3	-1	87885608	2099
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000232843	retained_intron		17	-1	73950178	368
ENSMUSG00000091575	processed_transcript	2010016I18Rik	ENSMUST00000191570	retained_intron		3	-1	106483461	1449
ENSMUSG00000032115	protein_coding	Hyou1	ENSMUST00000160112	retained_intron		9	1	44379584	2015
ENSMUSG00000024066	protein_coding	Xdh	ENSMUST00000232957	retained_intron		17	-1	73950096	576
ENSMUSG00000091575	processed_transcript	2010016I18Rik	ENSMUST00000187757	retained_intron		3	-1	106485848	1779
ENSMUSG00000028863	protein_coding	Meaf6	ENSMUST00000184205	nonsense_mediated_decay		4	1	125085164	1054
ENSMUSG00000117182	processed_pseudogene	Gm18068	ENSMUST00000233795	processed_pseudogene		17	-1	73933913	662
ENSMUSG00000091575	processed_transcript	2010016I18Rik	ENSMUST00000164330	processed_transcript		3	-1	106483437	1425
ENSMUSG00000030610	protein_coding	Det1	ENSMUST00000107431	protein_coding		7	-1	78843253	1439
ENSMUSG00000111426	unprocessed_pseudogene	Gm47318	ENSMUST00000214650	unprocessed_pseudogene		9	-1	14435411	91
ENSMUSG00000105272	TEC	Gm43071	ENSMUST00000197233	TEC		3	1	106567605	2032
ENSMUSG00000111252	unprocessed_pseudogene	Gm47317	ENSMUST00000216100	unprocessed_pseudogene		9	-1	14449439	85
ENSMUSG00000028863	protein_coding	Meaf6	ENSMUST00000124154	processed_transcript		4	1	125085165	504
ENSMUSG00000032115	protein_coding	Hyou1	ENSMUST00000160902	protein_coding	principal1	9	1	44379623	3374
ENSMUSG00000098832	unprocessed_pseudogene	Kdm4dl	ENSMUST00000184843	unprocessed_pseudogene		9	-1	14452022	1187
ENSMUSG00000001247	protein_coding	Lsr	ENSMUST00000098553	protein_coding		7	-1	30973426	1930
ENSMUSG00000028863	protein_coding	Meaf6	ENSMUST00000106171	protein_coding		4	1	125085261	667
ENSMUSG00000028863	protein_coding	Meaf6	ENSMUST00000184118	nonsense_mediated_decay		4	1	125086188	681
ENSMUSG00000032115	protein_coding	Hyou1	ENSMUST00000159473	protein_coding		9	1	44380529	681
ENSMUSG00000032115	protein_coding	Hyou1	ENSMUST00000161147	retained_intron		9	1	44390661	550
ENSMUSG00000028863	protein_coding	Meaf6	ENSMUST00000152816	processed_transcript		4	1	125089898	378
ENSMUSG00000028863	protein_coding	Meaf6	ENSMUST00000155212	retained_intron		4	1	125107976	511
ENSMUSG00000024397	protein_coding	Aif1	ENSMUST00000173324	protein_coding	principal1	17	-1	35176001	875
ENSMUSG00000104351	TEC	Gm37125	ENSMUST00000195877	TEC		1	1	172513249	1559
ENSMUSG00000030610	protein_coding	Det1	ENSMUST00000032839	protein_coding	principal1	7	-1	78847263	2269
ENSMUSG00000053914	protein_coding	Kdm4d	ENSMUST00000058796	protein_coding	principal1	9	-1	14500482	2695
ENSMUSG00000039908	protein_coding	Slc26a11	ENSMUST00000050880	protein_coding	principal1	11	1	119355557	2695
ENSMUSG00000099698	processed_pseudogene	Gm28740	ENSMUST00000186142	processed_pseudogene		1	-1	49173374	215
ENSMUSG00000053914	protein_coding	Kdm4d	ENSMUST00000115647	protein_coding		9	-1	14500400	2117
ENSMUSG00000099454	processed_pseudogene	Gm8367	ENSMUST00000186145	processed_pseudogene		1	1	49236252	887
ENSMUSG00000053640	lincRNA	Gm9915	ENSMUST00000188087	lincRNA		1	1	42229727	1382
ENSMUSG00000116987	lincRNA	Gm49625	ENSMUST00000232135	lincRNA		16	-1	91464803	1004
ENSMUSG00000050241	protein_coding	Klre1	ENSMUST00000053708	protein_coding	principal1	6	1	129577905	1294
ENSMUSG00000053640	lincRNA	Gm9915	ENSMUST00000066196	lincRNA		1	1	42229726	1383
ENSMUSG00000089748	processed_pseudogene	Matr3-ps2	ENSMUST00000160839	processed_pseudogene		8	-1	104846373	1996
ENSMUSG00000116782	processed_pseudogene	Gm46562	ENSMUST00000231789	processed_pseudogene		16	1	91458421	192
ENSMUSG00000024397	protein_coding	Aif1	ENSMUST00000025257	protein_coding	principal1	17	-1	35173278	847
ENSMUSG00000101919	lincRNA	Gm29664	ENSMUST00000191125	lincRNA		1	-1	42238695	463
ENSMUSG00000024208	protein_coding	Uqcc2	ENSMUST00000025045	protein_coding	principal1	17	-1	27133916	500
ENSMUSG00000025064	protein_coding	Col17a1	ENSMUST00000026045	protein_coding	alternative2	19	-1	47692094	5588
ENSMUSG00000101299	lincRNA	Gm28175	ENSMUST00000189138	lincRNA		1	1	42261855	399
ENSMUSG00000101299	lincRNA	Gm28175	ENSMUST00000209336	lincRNA		1	1	42261857	1477
ENSMUSG00000039908	protein_coding	Slc26a11	ENSMUST00000123634	processed_transcript		11	1	119355588	399
ENSMUSG00000025064	protein_coding	Col17a1	ENSMUST00000086923	protein_coding	principal3	19	-1	47692094	5477
ENSMUSG00000050241	protein_coding	Klre1	ENSMUST00000203322	nonsense_mediated_decay		6	1	129578251	934
ENSMUSG00000050241	protein_coding	Klre1	ENSMUST00000203865	retained_intron		6	1	129583419	2406
ENSMUSG00000039908	protein_coding	Slc26a11	ENSMUST00000147366	processed_transcript		11	1	119355593	570
ENSMUSG00000100180	lincRNA	Gm28140	ENSMUST00000190148	lincRNA		1	-1	42355937	1271
ENSMUSG00000024208	protein_coding	Uqcc2	ENSMUST00000145148	processed_transcript		17	-1	27133623	649
ENSMUSG00000051616	lincRNA	C230029F24Rik	ENSMUST00000188673	lincRNA		1	1	49244616	554
ENSMUSG00000035504	protein_coding	Reep6	ENSMUST00000105358	protein_coding		10	1	80329953	2208
ENSMUSG00000051616	lincRNA	C230029F24Rik	ENSMUST00000056879	lincRNA		1	1	49244616	528
ENSMUSG00000081252	processed_pseudogene	Gm16032	ENSMUST00000118534	processed_pseudogene		11	-1	74732370	168
ENSMUSG00000024208	protein_coding	Uqcc2	ENSMUST00000118613	protein_coding		17	-1	27133629	428
ENSMUSG00000035504	protein_coding	Reep6	ENSMUST00000105357	protein_coding		10	1	80329953	2127
ENSMUSG00000025064	protein_coding	Col17a1	ENSMUST00000151102	processed_transcript		19	-1	47649595	758
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000199884	protein_coding		3	1	94478295	366
ENSMUSG00000103106	TEC	Gm37047	ENSMUST00000191992	TEC		1	1	42491813	533
ENSMUSG00000099627	processed_pseudogene	Gm6757	ENSMUST00000189810	processed_pseudogene		1	-1	49400729	1706
ENSMUSG00000024397	protein_coding	Aif1	ENSMUST00000172679	processed_transcript		17	-1	35176068	763
ENSMUSG00000099577	processed_pseudogene	Gm3605	ENSMUST00000185858	processed_pseudogene		1	1	49498553	440
ENSMUSG00000024208	protein_coding	Uqcc2	ENSMUST00000119227	protein_coding		17	-1	27133902	452
ENSMUSG00000039908	protein_coding	Slc26a11	ENSMUST00000151612	processed_transcript		11	1	119362649	2752
ENSMUSG00000024397	protein_coding	Aif1	ENSMUST00000173106	protein_coding		17	-1	35172631	477
ENSMUSG00000108385	lincRNA	Gm44730	ENSMUST00000205902	lincRNA		7	-1	78858442	716
ENSMUSG00000024397	protein_coding	Aif1	ENSMUST00000174044	retained_intron		17	-1	35176001	775
ENSMUSG00000099882	processed_pseudogene	Gm28388	ENSMUST00000186262	processed_pseudogene		1	-1	49579586	437
ENSMUSG00000115350	processed_pseudogene	Gm49079	ENSMUST00000226594	processed_pseudogene		15	1	46438532	427
ENSMUSG00000025064	protein_coding	Col17a1	ENSMUST00000145254	processed_transcript		19	-1	47671048	357
ENSMUSG00000025064	protein_coding	Col17a1	ENSMUST00000235883	processed_transcript		19	-1	47675836	549
ENSMUSG00000101760	processed_pseudogene	Gm8384	ENSMUST00000190905	processed_pseudogene		1	1	50056782	704
ENSMUSG00000099608	lincRNA	4933411E06Rik	ENSMUST00000186016	lincRNA		1	1	50107470	1493
ENSMUSG00000073400	protein_coding	Trim10	ENSMUST00000060524	protein_coding	principal1	17	1	36869574	2245
ENSMUSG00000104199	TEC	4930420N18Rik	ENSMUST00000191831	TEC		1	1	42651726	676
ENSMUSG00000115177	lincRNA	4930523O13Rik	ENSMUST00000227535	lincRNA		15	-1	46496181	1300
ENSMUSG00000018921	protein_coding	Pelp1	ENSMUST00000019065	protein_coding	principal1	11	-1	70410028	3435
ENSMUSG00000115177	lincRNA	4930523O13Rik	ENSMUST00000228201	lincRNA		15	-1	46496149	1270
ENSMUSG00000001247	protein_coding	Lsr	ENSMUST00000001279	protein_coding	principal3	7	-1	30973464	2167
ENSMUSG00000103476	protein_coding	Strit1	ENSMUST00000192926	protein_coding	principal1	3	-1	63483879	243
ENSMUSG00000018921	protein_coding	Pelp1	ENSMUST00000135148	protein_coding		11	-1	70410031	562
ENSMUSG00000004897	protein_coding	Hdgf	ENSMUST00000005017	protein_coding	principal1	3	1	87906321	2245
ENSMUSG00000095026	protein_coding	Gm3336	ENSMUST00000179347	protein_coding	principal2	8	1	70718543	1149
ENSMUSG00000025607	protein_coding	Copg2	ENSMUST00000166192	protein_coding	alternative1	6	-1	30896794	3155
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000181660	lincRNA		1	-1	42694808	2085
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000151894	retained_intron		13	-1	6648725	8681
ENSMUSG00000095026	protein_coding	Gm3336	ENSMUST00000213065	protein_coding	alternative2	8	1	70718543	842
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000144053	retained_intron		13	-1	6602811	702
ENSMUSG00000117091	protein_coding	Gm5698	ENSMUST00000178317	protein_coding	principal1	1	-1	30977968	726
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000148999	retained_intron		13	-1	6648725	1726
ENSMUSG00000086726	processed_pseudogene	Gm9458	ENSMUST00000135273	processed_pseudogene		1	-1	30986953	729
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000135761	retained_intron		13	-1	6622052	756
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000181725	lincRNA		1	-1	42693128	615
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000137327	retained_intron		13	-1	6648725	931
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000231581	processed_transcript		2	1	145675215	1668
ENSMUSG00000004897	protein_coding	Hdgf	ENSMUST00000159492	protein_coding		3	1	87906850	933
ENSMUSG00000021196	protein_coding	Pfkp	ENSMUST00000136585	protein_coding		13	-1	6636650	629
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000176154	lincRNA		1	-1	42666991	514
ENSMUSG00000042677	protein_coding	Zc3h12a	ENSMUST00000036188	protein_coding	principal1	4	-1	125127840	2755
ENSMUSG00000000168	protein_coding	Dlat	ENSMUST00000034567	protein_coding	principal1	9	-1	50659780	4035
ENSMUSG00000004897	protein_coding	Hdgf	ENSMUST00000162631	nonsense_mediated_decay		3	1	87907052	763
ENSMUSG00000102421	unprocessed_pseudogene	Gm37325	ENSMUST00000194971	unprocessed_pseudogene		Y	1	17596834	694
ENSMUSG00000004897	protein_coding	Hdgf	ENSMUST00000161616	processed_transcript		3	1	87907534	365
ENSMUSG00000004897	protein_coding	Hdgf	ENSMUST00000160198	processed_transcript		3	1	87910034	377
ENSMUSG00000001247	protein_coding	Lsr	ENSMUST00000108116	protein_coding	alternative2	7	-1	30973427	2071
ENSMUSG00000086976	antisense	Gm12316	ENSMUST00000125853	antisense		11	-1	70613211	406
ENSMUSG00000090629	protein_coding	Olfr180	ENSMUST00000206168	protein_coding	alternative2	16	-1	58929392	1518
ENSMUSG00000004897	protein_coding	Hdgf	ENSMUST00000160312	retained_intron		3	1	87913961	582
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000144661	processed_transcript		2	1	145675367	2753
ENSMUSG00000042677	protein_coding	Zc3h12a	ENSMUST00000131685	retained_intron		4	-1	125122520	660
ENSMUSG00000084866	processed_transcript	A930006K02Rik	ENSMUST00000231422	processed_transcript		16	1	91465025	1151
ENSMUSG00000084866	processed_transcript	A930006K02Rik	ENSMUST00000231990	processed_transcript		16	1	91465025	1069
ENSMUSG00000084866	processed_transcript	A930006K02Rik	ENSMUST00000149172	processed_transcript		16	1	91465104	776
ENSMUSG00000116544	unprocessed_pseudogene	Gm49626	ENSMUST00000232081	unprocessed_pseudogene		16	1	91465125	479
ENSMUSG00000099864	processed_pseudogene	Gm8391	ENSMUST00000185632	processed_pseudogene		1	-1	50178291	726
ENSMUSG00000038205	protein_coding	Prkab2	ENSMUST00000143927	nonsense_mediated_decay		3	1	97658193	1878
ENSMUSG00000100451	lincRNA	Gm29665	ENSMUST00000191457	lincRNA		1	-1	50398079	528
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000137180	processed_transcript		2	1	145701197	2082
ENSMUSG00000000168	protein_coding	Dlat	ENSMUST00000155417	retained_intron		9	-1	50649895	526
ENSMUSG00000000290	protein_coding	Itgb2	ENSMUST00000000299	protein_coding	principal1	10	1	77530252	2970
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000176977	lincRNA		1	-1	42651679	562
ENSMUSG00000009555	protein_coding	Cdk9	ENSMUST00000125058	retained_intron		2	-1	32711047	3565
ENSMUSG00000096457	protein_coding	Gm10147	ENSMUST00000075388	protein_coding	principal1	X	-1	28607842	864
ENSMUSG00000000168	protein_coding	Dlat	ENSMUST00000142275	processed_transcript		9	-1	50647628	484
ENSMUSG00000001247	protein_coding	Lsr	ENSMUST00000205961	protein_coding	principal3	7	-1	30973322	2021
ENSMUSG00000096457	protein_coding	Gm10147	ENSMUST00000178966	protein_coding	principal1	X	-1	28606271	639
ENSMUSG00000000290	protein_coding	Itgb2	ENSMUST00000131023	protein_coding		10	1	77530347	364
ENSMUSG00000038205	protein_coding	Prkab2	ENSMUST00000045743	protein_coding	principal1	3	1	97658212	5006
ENSMUSG00000090629	protein_coding	Olfr180	ENSMUST00000171656	protein_coding	principal2	16	-1	58918498	1154
ENSMUSG00000001247	protein_coding	Lsr	ENSMUST00000147431	protein_coding		7	-1	30973415	1073
ENSMUSG00000000168	protein_coding	Dlat	ENSMUST00000125919	processed_transcript		9	-1	50646189	770
ENSMUSG00000000290	protein_coding	Itgb2	ENSMUST00000130059	protein_coding		10	1	77530370	630
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000142847	protein_coding		2	1	145784734	334
ENSMUSG00000000168	protein_coding	Dlat	ENSMUST00000126933	retained_intron		9	-1	50644361	779
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000181593	lincRNA		1	-1	42693153	680
ENSMUSG00000090629	protein_coding	Olfr180	ENSMUST00000205883	protein_coding		16	-1	58918498	609
ENSMUSG00000000168	protein_coding	Dlat	ENSMUST00000132455	retained_intron		9	-1	50644062	459
ENSMUSG00000012483	protein_coding	Rpa3	ENSMUST00000012627	protein_coding	principal1	6	-1	8259173	670
ENSMUSG00000079103	protein_coding	Tgm7	ENSMUST00000110675	protein_coding	principal1	2	-1	121116396	2157
ENSMUSG00000090951	protein_coding	Olfr181	ENSMUST00000214942	processed_transcript		16	-1	58928654	1889
ENSMUSG00000079103	protein_coding	Tgm7	ENSMUST00000238428	protein_coding		2	-1	121109792	2124
ENSMUSG00000038205	protein_coding	Prkab2	ENSMUST00000130924	nonsense_mediated_decay		3	1	97658214	1958
ENSMUSG00000090951	protein_coding	Olfr181	ENSMUST00000205986	protein_coding	principal1	16	-1	58928755	1891
ENSMUSG00000038205	protein_coding	Prkab2	ENSMUST00000132719	retained_intron		3	1	97666530	3633
ENSMUSG00000020143	protein_coding	Dock2	ENSMUST00000093193	protein_coding	principal1	11	-1	34783892	6409
ENSMUSG00000038205	protein_coding	Prkab2	ENSMUST00000152731	retained_intron		3	1	97667340	3442
ENSMUSG00000012483	protein_coding	Rpa3	ENSMUST00000159594	retained_intron		6	-1	8259140	682
ENSMUSG00000000290	protein_coding	Itgb2	ENSMUST00000156644	nonsense_mediated_decay		10	1	77530374	2411
ENSMUSG00000038205	protein_coding	Prkab2	ENSMUST00000198337	processed_transcript		3	1	97670198	611
ENSMUSG00000090951	protein_coding	Olfr181	ENSMUST00000205742	protein_coding	principal1	16	-1	58926660	1104
ENSMUSG00000104032	unprocessed_pseudogene	Gm20833	ENSMUST00000192708	unprocessed_pseudogene		Y	1	17757509	696
ENSMUSG00000020143	protein_coding	Dock2	ENSMUST00000101365	protein_coding		11	-1	34783892	3785
ENSMUSG00000035504	protein_coding	Reep6	ENSMUST00000105354	protein_coding	principal3	10	1	80329953	2208
ENSMUSG00000099683	lincRNA	Gm28214	ENSMUST00000185663	lincRNA		2	1	137198983	420
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000180689	lincRNA		1	-1	42694825	546
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000188153	lincRNA		1	-1	42694825	499
ENSMUSG00000000290	protein_coding	Itgb2	ENSMUST00000153541	nonsense_mediated_decay		10	1	77530380	2619
ENSMUSG00000020143	protein_coding	Dock2	ENSMUST00000157036	retained_intron		11	-1	34312637	2973
ENSMUSG00000035504	protein_coding	Reep6	ENSMUST00000105355	protein_coding	alternative2	10	1	80329953	2127
ENSMUSG00000020143	protein_coding	Dock2	ENSMUST00000127846	retained_intron		11	-1	34231670	366
ENSMUSG00000085504	lincRNA	Gm14055	ENSMUST00000130262	lincRNA		2	1	137288503	668
ENSMUSG00000034709	protein_coding	Ppp1r21	ENSMUST00000038551	protein_coding	principal1	17	1	88530118	3141
ENSMUSG00000035504	protein_coding	Reep6	ENSMUST00000153167	retained_intron		10	1	80330198	848
ENSMUSG00000085640	lincRNA	Gm14064	ENSMUST00000134833	lincRNA		2	1	137663435	727
ENSMUSG00000090951	protein_coding	Olfr181	ENSMUST00000205668	protein_coding		16	-1	58928644	763
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000176052	lincRNA		1	-1	42667672	506
ENSMUSG00000035504	protein_coding	Reep6	ENSMUST00000040081	protein_coding		10	1	80330202	850
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000186656	lincRNA		1	-1	42693093	647
ENSMUSG00000090951	protein_coding	Olfr181	ENSMUST00000075361	protein_coding	principal1	16	-1	58928644	1391
ENSMUSG00000034709	protein_coding	Ppp1r21	ENSMUST00000189734	retained_intron		17	1	88530216	695
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000185599	lincRNA		1	-1	42694842	343
ENSMUSG00000086214	lincRNA	Gm14062	ENSMUST00000134795	lincRNA		2	-1	137876831	4134
ENSMUSG00000035504	protein_coding	Reep6	ENSMUST00000186864	protein_coding	principal3	10	1	80330145	2015
ENSMUSG00000102883	TEC	Gm37279	ENSMUST00000194630	TEC		3	1	63483884	338
ENSMUSG00000020143	protein_coding	Dock2	ENSMUST00000143540	nonsense_mediated_decay		11	-1	34783892	3727
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000177136	lincRNA		1	-1	42694825	1543
ENSMUSG00000034709	protein_coding	Ppp1r21	ENSMUST00000191340	retained_intron		17	1	88562117	279
ENSMUSG00000112603	processed_pseudogene	Gm18510	ENSMUST00000219335	processed_pseudogene		10	-1	123891898	1096
ENSMUSG00000060424	lincRNA	Pantr1	ENSMUST00000078844	lincRNA		1	-1	42666912	198
ENSMUSG00000112250	processed_pseudogene	Gm47837	ENSMUST00000220441	processed_pseudogene		10	1	124218862	567
ENSMUSG00000034709	protein_coding	Ppp1r21	ENSMUST00000188064	retained_intron		17	1	88575076	396
ENSMUSG00000108864	lincRNA	Gm44933	ENSMUST00000208637	lincRNA		7	-1	84439226	1987
ENSMUSG00000034709	protein_coding	Ppp1r21	ENSMUST00000190136	retained_intron		17	1	88575194	733
ENSMUSG00000112364	transcribed_processed_pseudogene	4930503E24Rik	ENSMUST00000219167	processed_transcript		10	1	124469074	1333
ENSMUSG00000112364	transcribed_processed_pseudogene	4930503E24Rik	ENSMUST00000219657	transcribed_processed_pseudogene		10	1	124523438	942
ENSMUSG00000112130	lincRNA	Gm47839	ENSMUST00000217909	lincRNA		10	-1	124845481	932
ENSMUSG00000072789	processed_pseudogene	Gm10420	ENSMUST00000121713	processed_pseudogene		6	1	122696001	882
ENSMUSG00000058216	protein_coding	Gstp3	ENSMUST00000189808	protein_coding	principal1	19	-1	4059446	708
ENSMUSG00000040774	protein_coding	Cept1	ENSMUST00000068301	protein_coding	principal3	3	-1	106547802	2814
ENSMUSG00000034709	protein_coding	Ppp1r21	ENSMUST00000185400	retained_intron		17	1	88578730	1112
ENSMUSG00000118010	lincRNA	Gm50316	ENSMUST00000235247	lincRNA		17	1	27139549	355
ENSMUSG00000109347	lincRNA	Gm45175	ENSMUST00000208295	lincRNA		7	-1	84444551	1375
ENSMUSG00000112542	TEC	Gm47840	ENSMUST00000217790	TEC		10	-1	124857492	2280
ENSMUSG00000080932	processed_pseudogene	Gm10224	ENSMUST00000119496	processed_pseudogene		6	-1	122699028	615
ENSMUSG00000112283	lincRNA	Gm36719	ENSMUST00000219518	lincRNA		10	1	124995983	927
ENSMUSG00000102864	antisense	Gm37634	ENSMUST00000195700	antisense		1	1	161040620	650
ENSMUSG00000031734	protein_coding	Irx3	ENSMUST00000093312	protein_coding	principal4	8	-1	91801915	2610
ENSMUSG00000020143	protein_coding	Dock2	ENSMUST00000154178	retained_intron		11	-1	34783883	3819
ENSMUSG00000058216	protein_coding	Gstp3	ENSMUST00000238086	processed_transcript		19	-1	4059569	453
ENSMUSG00000040774	protein_coding	Cept1	ENSMUST00000121231	protein_coding	principal3	3	-1	106547582	2121
ENSMUSG00000058216	protein_coding	Gstp3	ENSMUST00000236991	processed_transcript		19	-1	4059461	305
ENSMUSG00000051198	lincRNA	4930548G14Rik	ENSMUST00000190364	lincRNA		15	1	46623305	1185
ENSMUSG00000051198	lincRNA	4930548G14Rik	ENSMUST00000060825	lincRNA		15	1	46625456	318
ENSMUSG00000020143	protein_coding	Dock2	ENSMUST00000101364	protein_coding		11	-1	34688479	1616
ENSMUSG00000030609	protein_coding	Aen	ENSMUST00000123824	processed_transcript		7	1	78895854	4428
ENSMUSG00000058216	protein_coding	Gstp3	ENSMUST00000076451	protein_coding		19	-1	4059295	685
ENSMUSG00000040774	protein_coding	Cept1	ENSMUST00000039153	protein_coding	alternative1	3	-1	106547731	2020
ENSMUSG00000097032	antisense	4930539J05Rik	ENSMUST00000182865	antisense		3	-1	135438665	511
ENSMUSG00000102400	lincRNA	Gm37865	ENSMUST00000194996	lincRNA		Y	-1	17806904	437
ENSMUSG00000097032	antisense	4930539J05Rik	ENSMUST00000181619	antisense		3	-1	135437759	1406
ENSMUSG00000040774	protein_coding	Cept1	ENSMUST00000192438	protein_coding		3	-1	106547699	837
ENSMUSG00000037003	protein_coding	Tns2	ENSMUST00000228958	protein_coding		15	1	102100413	4268
ENSMUSG00000113726	antisense	Gm36099	ENSMUST00000221946	antisense		13	-1	33034560	1798
ENSMUSG00000037003	protein_coding	Tns2	ENSMUST00000229592	protein_coding		15	1	102102228	544
ENSMUSG00000028776	protein_coding	Tinagl1	ENSMUST00000030560	nonsense_mediated_decay		4	-1	130174802	2085
ENSMUSG00000040774	protein_coding	Cept1	ENSMUST00000148269	protein_coding		3	-1	106547743	673
ENSMUSG00000031734	protein_coding	Irx3	ENSMUST00000175795	protein_coding	alternative2	8	-1	91802067	2748
ENSMUSG00000102520	lincRNA	Gm36941	ENSMUST00000194799	lincRNA		Y	-1	17835401	621
ENSMUSG00000102520	lincRNA	Gm36941	ENSMUST00000193402	lincRNA		Y	-1	17835401	437
ENSMUSG00000097789	protein_coding	Gm2115	ENSMUST00000180387	protein_coding	principal1	7	1	84528954	7055
ENSMUSG00000040774	protein_coding	Cept1	ENSMUST00000137530	nonsense_mediated_decay		3	-1	106547718	357
ENSMUSG00000102726	lincRNA	Gm37937	ENSMUST00000194130	lincRNA		Y	1	17867025	2168
ENSMUSG00000097789	protein_coding	Gm2115	ENSMUST00000208409	processed_transcript		7	1	84529138	474
ENSMUSG00000028776	protein_coding	Tinagl1	ENSMUST00000105999	protein_coding	principal2	4	-1	130174802	1952
ENSMUSG00000061825	protein_coding	Ces2c	ENSMUST00000055052	protein_coding	principal1	8	1	104847068	1970
ENSMUSG00000109422	TEC	Gm45174	ENSMUST00000208884	TEC		7	1	84554187	3065
ENSMUSG00000073684	protein_coding	Faap20	ENSMUST00000126803	processed_transcript		4	1	155249802	839
ENSMUSG00000040774	protein_coding	Cept1	ENSMUST00000141525	protein_coding		3	-1	106547592	473
ENSMUSG00000061825	protein_coding	Ces2c	ENSMUST00000162970	retained_intron		8	1	104853750	708
ENSMUSG00000109513	TEC	Gm44928	ENSMUST00000208098	TEC		7	-1	84575842	128
ENSMUSG00000046413	antisense	Irx3os	ENSMUST00000133337	antisense		8	1	91800415	2990
ENSMUSG00000028776	protein_coding	Tinagl1	ENSMUST00000145000	retained_intron		4	-1	130166611	911
ENSMUSG00000099941	processed_pseudogene	Gm20118	ENSMUST00000187207	processed_pseudogene		1	1	50533030	162
ENSMUSG00000073684	protein_coding	Faap20	ENSMUST00000126713	processed_transcript		4	1	155249861	445
ENSMUSG00000028776	protein_coding	Tinagl1	ENSMUST00000175992	protein_coding	alternative2	4	-1	130174792	1847
ENSMUSG00000073684	protein_coding	Faap20	ENSMUST00000122957	processed_transcript		4	1	155249877	343
ENSMUSG00000046413	antisense	Irx3os	ENSMUST00000133528	antisense		8	1	91802175	1354
ENSMUSG00000103757	lincRNA	Gm37286	ENSMUST00000195885	lincRNA		Y	-1	17926162	1499
ENSMUSG00000087010	lincRNA	1700041M05Rik	ENSMUST00000130055	lincRNA		4	1	125228597	306
ENSMUSG00000073684	protein_coding	Faap20	ENSMUST00000149468	processed_transcript		4	1	155249897	783
ENSMUSG00000046413	antisense	Irx3os	ENSMUST00000062522	antisense		8	1	91800415	2988
ENSMUSG00000027901	protein_coding	Dennd2d	ENSMUST00000139062	processed_transcript		3	1	106482405	422
ENSMUSG00000028776	protein_coding	Tinagl1	ENSMUST00000105998	protein_coding	principal2	4	-1	130175122	1976
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000119818	protein_coding		10	-1	94035817	11138
ENSMUSG00000029369	protein_coding	Afm	ENSMUST00000113179	protein_coding	principal1	5	1	90518932	2038
ENSMUSG00000102739	protein_coding	Gm20772	ENSMUST00000188928	protein_coding	principal1	Y	1	17874741	1343
ENSMUSG00000023022	protein_coding	Lima1	ENSMUST00000109024	protein_coding	principal3	15	-1	99820143	4109
ENSMUSG00000103994	lincRNA	Gm38028	ENSMUST00000193309	lincRNA		Y	1	17957447	2169
ENSMUSG00000028776	protein_coding	Tinagl1	ENSMUST00000145774	retained_intron		4	-1	130169484	849
ENSMUSG00000029369	protein_coding	Afm	ENSMUST00000128740	protein_coding		5	1	90518949	2465
ENSMUSG00000073684	protein_coding	Faap20	ENSMUST00000148406	nonsense_mediated_decay		4	1	155249966	1071
ENSMUSG00000037003	protein_coding	Tns2	ENSMUST00000169627	protein_coding	principal2	15	1	102102934	4761
ENSMUSG00000028776	protein_coding	Tinagl1	ENSMUST00000132545	protein_coding		4	-1	130174691	977
ENSMUSG00000028776	protein_coding	Tinagl1	ENSMUST00000175822	processed_transcript		4	-1	130174792	1100
ENSMUSG00000106863	processed_transcript	Gm42109	ENSMUST00000200893	processed_transcript		5	-1	90589057	664
ENSMUSG00000037003	protein_coding	Tns2	ENSMUST00000230474	protein_coding	alternative2	15	1	102104425	4637
ENSMUSG00000009555	protein_coding	Cdk9	ENSMUST00000009699	protein_coding	principal1	2	-1	32712784	1733
ENSMUSG00000106863	processed_transcript	Gm42109	ENSMUST00000200783	processed_transcript		5	-1	90589077	594
ENSMUSG00000028776	protein_coding	Tinagl1	ENSMUST00000133660	retained_intron		4	-1	130174820	596
ENSMUSG00000094325	protein_coding	Gm20831	ENSMUST00000194411	protein_coding	principal1	Y	1	17965160	1344
ENSMUSG00000106705	processed_pseudogene	Gm2602	ENSMUST00000202112	processed_pseudogene		5	1	90558849	571
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000028288	protein_coding	principal1	2	-1	26503822	9488
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000103224	protein_coding	principal3	2	-1	126876230	7107
ENSMUSG00000037003	protein_coding	Tns2	ENSMUST00000229908	retained_intron		15	1	102106618	365
ENSMUSG00000009555	protein_coding	Cdk9	ENSMUST00000120105	protein_coding		2	-1	32712267	1565
ENSMUSG00000094325	protein_coding	Gm20831	ENSMUST00000177639	protein_coding	principal1	Y	1	17874741	1337
ENSMUSG00000037003	protein_coding	Tns2	ENSMUST00000229035	retained_intron		15	1	102113131	359
ENSMUSG00000021403	protein_coding	Serpinb9b	ENSMUST00000006392	protein_coding	principal1	13	1	33027416	3253
ENSMUSG00000037003	protein_coding	Tns2	ENSMUST00000229097	retained_intron		15	1	102114399	870
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000132941	processed_transcript		2	-1	26462747	434
ENSMUSG00000009555	protein_coding	Cdk9	ENSMUST00000123170	nonsense_mediated_decay		2	-1	32713076	1689
ENSMUSG00000037003	protein_coding	Tns2	ENSMUST00000229800	retained_intron		15	1	102115139	468
ENSMUSG00000009555	protein_coding	Cdk9	ENSMUST00000130399	retained_intron		2	-1	32709721	444
ENSMUSG00000009555	protein_coding	Cdk9	ENSMUST00000144210	retained_intron		2	-1	32710349	720
ENSMUSG00000021403	protein_coding	Serpinb9b	ENSMUST00000220566	processed_transcript		13	1	33027551	725
ENSMUSG00000009555	protein_coding	Cdk9	ENSMUST00000128265	retained_intron		2	-1	32710502	482
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000110005	protein_coding	alternative2	2	1	145785980	4641
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000028843	protein_coding	alternative1	2	-1	126876117	6985
ENSMUSG00000037003	protein_coding	Tns2	ENSMUST00000046144	protein_coding	alternative2	15	1	102102988	4718
ENSMUSG00000009555	protein_coding	Cdk9	ENSMUST00000154131	nonsense_mediated_decay		2	-1	32712757	846
ENSMUSG00000009555	protein_coding	Cdk9	ENSMUST00000155205	protein_coding		2	-1	32712253	366
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000127277	retained_intron		2	-1	126795536	3849
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000148948	processed_transcript		2	-1	26466163	184
ENSMUSG00000043789	protein_coding	Vwce	ENSMUST00000238148	retained_intron		19	1	10634213	1222
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000138034	processed_transcript		2	-1	26466367	157
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000126872	processed_transcript		2	-1	26466654	284
ENSMUSG00000073684	protein_coding	Faap20	ENSMUST00000105627	protein_coding	alternative2	4	1	155249989	710
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000047711	protein_coding		10	-1	94035748	4479
ENSMUSG00000117702	lincRNA	Gm50281	ENSMUST00000237057	lincRNA		19	-1	47696533	1212
ENSMUSG00000118149	lincRNA	Gm50282	ENSMUST00000235588	lincRNA		19	1	47721035	1102
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000077407	protein_coding		6	1	83165920	4118
ENSMUSG00000021647	protein_coding	Cartpt	ENSMUST00000022150	protein_coding		13	-1	99900641	827
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000118077	protein_coding	principal1	10	-1	94035705	2223
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000140082	processed_transcript		2	-1	26466794	332
ENSMUSG00000090151	antisense	Gm16043	ENSMUST00000160030	antisense		6	-1	8443455	616
ENSMUSG00000023022	protein_coding	Lima1	ENSMUST00000073691	protein_coding	alternative2	15	-1	99875456	4243
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000147481	processed_transcript		2	-1	26467613	324
ENSMUSG00000107724	processed_pseudogene	Gm16042	ENSMUST00000204813	processed_pseudogene		6	-1	8596989	1247
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000118205	protein_coding		10	-1	94035742	3705
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000123873	processed_transcript		2	-1	26469749	406
ENSMUSG00000100164	bidirectional_promoter_lncRNA	2610306M01Rik	ENSMUST00000185414	bidirectional_promoter_lncRNA		6	-1	86849440	1042
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000129506	processed_transcript		2	-1	26470498	459
ENSMUSG00000021647	protein_coding	Cartpt	ENSMUST00000224142	protein_coding	principal1	13	-1	99901091	1238
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000147976	nonsense_mediated_decay		2	1	145786116	4657
ENSMUSG00000023022	protein_coding	Lima1	ENSMUST00000172119	retained_intron		15	-1	99783973	506
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000155675	retained_intron		2	-1	126802625	1123
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000141241	nonsense_mediated_decay		10	-1	93996977	565
ENSMUSG00000023022	protein_coding	Lima1	ENSMUST00000230033	retained_intron		15	-1	99802133	405
ENSMUSG00000089890	antisense	Gm16055	ENSMUST00000161366	antisense		6	-1	8364136	626
ENSMUSG00000073684	protein_coding	Faap20	ENSMUST00000097747	protein_coding	alternative2	4	1	155250003	1479
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000132820	protein_coding		2	-1	26516663	512
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000136964	protein_coding		2	-1	126797846	803
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000150449	nonsense_mediated_decay		2	1	145786162	449
ENSMUSG00000023022	protein_coding	Lima1	ENSMUST00000231121	protein_coding		15	-1	99874671	448
ENSMUSG00000072692	transcribed_processed_pseudogene	Rpl37rt	ENSMUST00000100847	processed_transcript		5	-1	115110268	682
ENSMUSG00000072692	transcribed_processed_pseudogene	Rpl37rt	ENSMUST00000201888	processed_transcript		5	-1	115107962	408
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000135733	retained_intron		2	-1	126797829	574
ENSMUSG00000087305	processed_transcript	A430035B10Rik	ENSMUST00000148063	processed_transcript		6	-1	8510430	2010
ENSMUSG00000073684	protein_coding	Faap20	ENSMUST00000143709	protein_coding		4	1	155250332	692
ENSMUSG00000072692	transcribed_processed_pseudogene	Rpl37rt	ENSMUST00000124641	transcribed_processed_pseudogene		5	-1	115103521	294
ENSMUSG00000041308	protein_coding	Sntb2	ENSMUST00000212524	protein_coding	principal2	8	1	106935750	9945
ENSMUSG00000070690	protein_coding	Albfm1	ENSMUST00000094615	protein_coding	principal1	5	1	90561107	2308
ENSMUSG00000023022	protein_coding	Lima1	ENSMUST00000171450	retained_intron		15	-1	99875416	2680
ENSMUSG00000073684	protein_coding	Faap20	ENSMUST00000156404	retained_intron		4	1	155250696	655
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000144278	processed_transcript		2	1	145822150	384
ENSMUSG00000026923	protein_coding	Notch1	ENSMUST00000131393	retained_intron		2	-1	26503824	4132
ENSMUSG00000090406	antisense	Gm17058	ENSMUST00000168951	antisense		15	1	99765991	928
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000149269	processed_transcript		2	1	145822289	454
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000150704	nonsense_mediated_decay		10	-1	94035777	2874
ENSMUSG00000070690	protein_coding	Albfm1	ENSMUST00000200765	protein_coding		5	1	90561217	1691
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000123201	protein_coding		10	-1	94035801	668
ENSMUSG00000041308	protein_coding	Sntb2	ENSMUST00000047425	protein_coding	alternative2	8	1	106935751	3225
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000145874	processed_transcript		2	1	145862644	491
ENSMUSG00000073684	protein_coding	Faap20	ENSMUST00000178473	protein_coding	principal3	4	1	155249966	1076
ENSMUSG00000087305	processed_transcript	A430035B10Rik	ENSMUST00000124104	processed_transcript		6	-1	8497979	1350
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000150344	protein_coding		10	-1	94020723	694
ENSMUSG00000041308	protein_coding	Sntb2	ENSMUST00000212298	retained_intron		8	1	106936149	792
ENSMUSG00000097955	processed_pseudogene	Gm26950	ENSMUST00000182734	processed_pseudogene		7	-1	48220840	498
ENSMUSG00000115495	processed_pseudogene	Gm38541	ENSMUST00000228621	processed_pseudogene		15	1	46939070	817
ENSMUSG00000086714	processed_transcript	0610009E02Rik	ENSMUST00000133463	processed_transcript		2	1	26445696	1609
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000125327	processed_transcript		2	-1	126805059	671
ENSMUSG00000113396	antisense	Gm33467	ENSMUST00000221885	antisense		12	1	108695486	652
ENSMUSG00000001768	protein_coding	Rin2	ENSMUST00000094480	protein_coding	principal2	2	1	145786116	4657
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000132735	retained_intron		10	-1	94035749	5376
ENSMUSG00000085464	antisense	Gm16208	ENSMUST00000128476	antisense		8	-1	107031188	471
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000198316	protein_coding		3	1	94478296	2505
ENSMUSG00000081722	processed_pseudogene	Gm11763	ENSMUST00000119964	processed_pseudogene		2	-1	145701725	312
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000142334	retained_intron		2	-1	126817666	1444
ENSMUSG00000087305	processed_transcript	A430035B10Rik	ENSMUST00000161307	processed_transcript		6	-1	8509078	527
ENSMUSG00000086714	processed_transcript	0610009E02Rik	ENSMUST00000151521	processed_transcript		2	1	26445924	600
ENSMUSG00000087299	antisense	Gm12953	ENSMUST00000138426	antisense		4	1	116551740	751
ENSMUSG00000036099	protein_coding	Vezt	ENSMUST00000154267	processed_transcript		10	-1	94035667	397
ENSMUSG00000087305	processed_transcript	A430035B10Rik	ENSMUST00000123581	retained_intron		6	-1	8509021	579
ENSMUSG00000111349	processed_pseudogene	Gm48191	ENSMUST00000216926	processed_pseudogene		10	1	94028081	285
ENSMUSG00000110869	TEC	Gm49628	ENSMUST00000214203	TEC		10	-1	94035801	1790
ENSMUSG00000055900	protein_coding	Tmem69	ENSMUST00000129201	processed_transcript		4	-1	116553115	593
ENSMUSG00000097788	antisense	Gm16596	ENSMUST00000223178	antisense		12	-1	108555464	443
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000132003	retained_intron		2	-1	126833855	467
ENSMUSG00000087305	processed_transcript	A430035B10Rik	ENSMUST00000144568	processed_transcript		6	-1	8509138	1913
ENSMUSG00000030609	protein_coding	Aen	ENSMUST00000107425	protein_coding	principal3	7	1	78895927	4956
ENSMUSG00000086714	processed_transcript	0610009E02Rik	ENSMUST00000139144	processed_transcript		2	1	26445942	536
ENSMUSG00000036966	protein_coding	Spryd3	ENSMUST00000139279	retained_intron		15	-1	102136192	2666
ENSMUSG00000097788	antisense	Gm16596	ENSMUST00000180576	antisense		12	-1	108555618	604
ENSMUSG00000059447	protein_coding	Hadhb	ENSMUST00000026841	protein_coding	principal1	5	1	30155248	2033
ENSMUSG00000097788	antisense	Gm16596	ENSMUST00000220796	antisense		12	-1	108555468	363
ENSMUSG00000017499	protein_coding	Cdc6	ENSMUST00000092706	protein_coding	alternative2	11	1	98907801	4614
ENSMUSG00000059447	protein_coding	Hadhb	ENSMUST00000123980	protein_coding		5	1	30155258	610
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000134408	retained_intron		2	-1	126876186	2201
ENSMUSG00000059447	protein_coding	Hadhb	ENSMUST00000114783	protein_coding	principal1	5	1	30155272	2045
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000197558	protein_coding		3	1	94478335	2414
ENSMUSG00000027365	protein_coding	Trpm7	ENSMUST00000152615	retained_intron		2	-1	126834194	1001
ENSMUSG00000107171	TEC	Gm42572	ENSMUST00000202292	TEC		5	-1	73045154	3378
ENSMUSG00000114782	processed_pseudogene	Gm7920	ENSMUST00000225779	processed_pseudogene		14	1	41148912	193
ENSMUSG00000090561	sense_intronic	Gm17207	ENSMUST00000168686	sense_intronic		5	-1	73212643	645
ENSMUSG00000115875	processed_pseudogene	Gm49408	ENSMUST00000230402	processed_pseudogene		15	1	67873828	240
ENSMUSG00000116519	processed_pseudogene	Gm49409	ENSMUST00000230045	processed_pseudogene		15	-1	67942804	253
ENSMUSG00000025607	protein_coding	Copg2	ENSMUST00000133916	processed_transcript		6	-1	30896710	1915
ENSMUSG00000026709	protein_coding	Dars2	ENSMUST00000035430	protein_coding	principal1	1	-1	161070658	3619
ENSMUSG00000017499	protein_coding	Cdc6	ENSMUST00000133779	nonsense_mediated_decay		11	1	98907849	4802
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000113913	protein_coding		6	1	83165951	4163
ENSMUSG00000086376	antisense	1700071G01Rik	ENSMUST00000146728	antisense		5	1	73157014	367
ENSMUSG00000024210	protein_coding	Ip6k3	ENSMUST00000025046	protein_coding	principal1	17	-1	27167795	2342
ENSMUSG00000055900	protein_coding	Tmem69	ENSMUST00000069674	protein_coding	principal1	4	-1	116555935	974
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000124973	protein_coding	principal2	1	1	150392838	7430
ENSMUSG00000107109	TEC	Gm42571	ENSMUST00000201197	TEC		5	-1	73190417	2464
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000130212	protein_coding		6	1	83166004	652
ENSMUSG00000059447	protein_coding	Hadhb	ENSMUST00000114786	protein_coding	principal1	5	1	30155272	2048
ENSMUSG00000115534	processed_pseudogene	Gm7508	ENSMUST00000227510	processed_pseudogene		15	1	47421915	509
ENSMUSG00000025607	protein_coding	Copg2	ENSMUST00000135230	processed_transcript		6	-1	30896764	1261
ENSMUSG00000043789	protein_coding	Vwce	ENSMUST00000055115	protein_coding	principal1	19	1	10634233	4543
ENSMUSG00000073733	protein_coding	Cplane2	ENSMUST00000097813	protein_coding	principal1	4	1	141213956	985
ENSMUSG00000115707	processed_pseudogene	Gm2267	ENSMUST00000227023	processed_pseudogene		15	1	47520338	1740
ENSMUSG00000108535	unprocessed_pseudogene	Gm45071	ENSMUST00000205353	unprocessed_pseudogene		16	1	58960203	571
ENSMUSG00000073733	protein_coding	Cplane2	ENSMUST00000125175	processed_transcript		4	1	141214445	318
ENSMUSG00000025607	protein_coding	Copg2	ENSMUST00000131256	processed_transcript		6	-1	30896730	961
ENSMUSG00000055900	protein_coding	Tmem69	ENSMUST00000106478	protein_coding	principal1	4	-1	116555936	1962
ENSMUSG00000043789	protein_coding	Vwce	ENSMUST00000236323	processed_transcript		19	1	10634282	754
ENSMUSG00000073733	protein_coding	Cplane2	ENSMUST00000151475	processed_transcript		4	1	141218646	1201
ENSMUSG00000030609	protein_coding	Aen	ENSMUST00000107421	protein_coding	alternative2	7	1	78895934	2007
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000119161	protein_coding	alternative2	1	1	150393250	7480
ENSMUSG00000025607	protein_coding	Copg2	ENSMUST00000122833	processed_transcript		6	-1	30896426	695
ENSMUSG00000106275	lincRNA	Gm42495	ENSMUST00000200324	lincRNA		5	1	128444416	405
ENSMUSG00000059447	protein_coding	Hadhb	ENSMUST00000127364	retained_intron		5	1	30155275	4388
ENSMUSG00000025607	protein_coding	Copg2	ENSMUST00000151973	processed_transcript		6	-1	30896437	333
ENSMUSG00000030609	protein_coding	Aen	ENSMUST00000172017	processed_transcript		7	1	78895951	393
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000131701	retained_intron		1	1	150393384	572
ENSMUSG00000073399	protein_coding	Trim40	ENSMUST00000087158	protein_coding	principal3	17	-1	36890045	2117
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000200342	protein_coding		3	1	94478494	3173
ENSMUSG00000025607	protein_coding	Copg2	ENSMUST00000134137	processed_transcript		6	-1	30896748	215
ENSMUSG00000099952	unprocessed_pseudogene	Gm18356	ENSMUST00000185677	unprocessed_pseudogene		7	1	48293193	623
ENSMUSG00000043789	protein_coding	Vwce	ENSMUST00000235938	nonsense_mediated_decay		19	1	10648437	633
ENSMUSG00000104727	lincRNA	Gm42500	ENSMUST00000199898	lincRNA		5	1	128448904	517
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000141827	retained_intron		1	1	150411997	559
ENSMUSG00000030609	protein_coding	Aen	ENSMUST00000107423	protein_coding	principal3	7	1	78896009	2230
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000147769	retained_intron		1	1	150414788	362
ENSMUSG00000059447	protein_coding	Hadhb	ENSMUST00000197109	nonsense_mediated_decay		5	1	30155303	763
ENSMUSG00000098225	processed_pseudogene	Gm9556	ENSMUST00000182938	processed_pseudogene		16	1	32726666	940
ENSMUSG00000030609	protein_coding	Aen	ENSMUST00000138167	protein_coding		7	1	78898031	621
ENSMUSG00000073399	protein_coding	Trim40	ENSMUST00000172711	protein_coding	alternative2	17	-1	36889533	1539
ENSMUSG00000059447	protein_coding	Hadhb	ENSMUST00000122934	retained_intron		5	1	30174958	514
ENSMUSG00000043789	protein_coding	Vwce	ENSMUST00000235831	retained_intron		19	1	10657989	766
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000029784	protein_coding	principal1	3	1	94478831	2744
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000132522	retained_intron		1	1	150424739	576
ENSMUSG00000030609	protein_coding	Aen	ENSMUST00000205882	protein_coding		7	1	78900454	276
ENSMUSG00000104980	lincRNA	4930573I07Rik	ENSMUST00000197085	lincRNA		5	-1	128517611	396
ENSMUSG00000030609	protein_coding	Aen	ENSMUST00000206661	processed_transcript		7	1	78902361	441
ENSMUSG00000118392	antisense	4930524O05Rik	ENSMUST00000236337	antisense		19	-1	10648053	596
ENSMUSG00000073399	protein_coding	Trim40	ENSMUST00000174107	retained_intron		17	-1	36890123	566
ENSMUSG00000017499	protein_coding	Cdc6	ENSMUST00000093937	protein_coding	principal4	11	1	98908151	2559
ENSMUSG00000025607	protein_coding	Copg2	ENSMUST00000048774	protein_coding	principal2	6	-1	30896739	3961
ENSMUSG00000059447	protein_coding	Hadhb	ENSMUST00000133414	retained_intron		5	1	30178561	425
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000199775	protein_coding		3	1	94479078	2351
ENSMUSG00000030609	protein_coding	Aen	ENSMUST00000205861	protein_coding		7	1	78902579	534
ENSMUSG00000073399	protein_coding	Trim40	ENSMUST00000172640	processed_transcript		17	-1	36890112	225
ENSMUSG00000104980	lincRNA	4930573I07Rik	ENSMUST00000199120	lincRNA		5	-1	128517634	413
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000151563	protein_coding		1	1	150429364	1940
ENSMUSG00000059447	protein_coding	Hadhb	ENSMUST00000141236	retained_intron		5	1	30180232	507
ENSMUSG00000017499	protein_coding	Cdc6	ENSMUST00000135862	retained_intron		11	1	98920466	694
ENSMUSG00000103366	TEC	C630004L07Rik	ENSMUST00000193236	TEC		4	-1	141239453	1275
ENSMUSG00000118605	unprocessed_pseudogene	AC161374.2	ENSMUST00000239353	unprocessed_pseudogene		14	1	24329401	485
ENSMUSG00000103366	TEC	C630004L07Rik	ENSMUST00000195673	TEC		4	-1	141239453	1269
ENSMUSG00000114913	processed_pseudogene	Gm18276	ENSMUST00000223662	processed_pseudogene		14	1	24358359	596
ENSMUSG00000034152	protein_coding	Exoc3	ENSMUST00000035934	protein_coding	principal1	13	-1	74208709	4922
ENSMUSG00000105172	TEC	Gm42499	ENSMUST00000196193	TEC		5	1	128520221	1412
ENSMUSG00000118584	unprocessed_pseudogene	AC161374.1	ENSMUST00000239338	unprocessed_pseudogene		14	1	24364283	466
ENSMUSG00000062105	protein_coding	Olfr183	ENSMUST00000206303	protein_coding	principal1	16	1	58995357	1862
ENSMUSG00000100237	lincRNA	Gm28644	ENSMUST00000191364	lincRNA		1	1	31041919	585
ENSMUSG00000062105	protein_coding	Olfr183	ENSMUST00000214916	protein_coding	principal1	16	1	58995357	2249
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000113919	protein_coding	principal1	6	1	83179586	4292
ENSMUSG00000062105	protein_coding	Olfr183	ENSMUST00000214831	protein_coding	principal1	16	1	58995357	1906
ENSMUSG00000100910	antisense	Gm29128	ENSMUST00000186448	antisense		1	1	31136026	2858
ENSMUSG00000114567	lincRNA	Gm47774	ENSMUST00000224191	lincRNA		14	-1	24377252	794
ENSMUSG00000062105	protein_coding	Olfr183	ENSMUST00000213465	protein_coding	principal1	16	1	58995362	2200
ENSMUSG00000027951	protein_coding	Adar	ENSMUST00000197253	retained_intron		3	1	89715022	1668
ENSMUSG00000034152	protein_coding	Exoc3	ENSMUST00000220679	processed_transcript		13	-1	74176479	635
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000150752	retained_intron		1	1	150430424	1892
ENSMUSG00000114207	TEC	Gm41109	ENSMUST00000225913	TEC		14	-1	24429822	4659
ENSMUSG00000118592	unprocessed_pseudogene	AC154573.1	ENSMUST00000239332	unprocessed_pseudogene		14	1	24426833	514
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000113918	protein_coding		6	1	83179589	4321
ENSMUSG00000034152	protein_coding	Exoc3	ENSMUST00000222248	retained_intron		13	-1	74174447	696
ENSMUSG00000027259	protein_coding	Adal	ENSMUST00000119031	protein_coding	principal1	2	1	121140498	2477
ENSMUSG00000062105	protein_coding	Olfr183	ENSMUST00000073320	protein_coding	principal1	16	1	58995385	2040
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000141680	protein_coding		6	1	83179613	696
ENSMUSG00000114575	lincRNA	Gm47814	ENSMUST00000224174	lincRNA		14	-1	24446403	378
ENSMUSG00000004540	protein_coding	Psg17	ENSMUST00000004655	protein_coding	principal1	7	-1	18821607	2100
ENSMUSG00000034152	protein_coding	Exoc3	ENSMUST00000222213	nonsense_mediated_decay		13	-1	74207093	450
ENSMUSG00000034152	protein_coding	Exoc3	ENSMUST00000223045	protein_coding		13	-1	74208262	775
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000113907	protein_coding		6	1	83185946	4205
ENSMUSG00000108471	processed_pseudogene	Gm18855	ENSMUST00000206689	processed_pseudogene		7	1	18831775	570
ENSMUSG00000108537	unprocessed_pseudogene	Olfr184-ps1	ENSMUST00000205922	unprocessed_pseudogene		16	-1	59007417	516
ENSMUSG00000034152	protein_coding	Exoc3	ENSMUST00000220548	retained_intron		13	-1	74208732	461
ENSMUSG00000036966	protein_coding	Spryd3	ENSMUST00000154032	protein_coding	principal1	15	-1	102136234	2456
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000123313	retained_intron		6	1	83188611	718
ENSMUSG00000084924	unprocessed_pseudogene	Vmn1r-ps103	ENSMUST00000120171	unprocessed_pseudogene		13	1	22441272	893
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000132257	retained_intron		1	1	150437435	934
ENSMUSG00000036966	protein_coding	Spryd3	ENSMUST00000128884	processed_transcript		15	-1	102128884	600
ENSMUSG00000108860	processed_pseudogene	Gm6070	ENSMUST00000207275	processed_pseudogene		8	1	4465589	419
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000127824	retained_intron		6	1	83194344	539
ENSMUSG00000036966	protein_coding	Spryd3	ENSMUST00000156475	retained_intron		15	-1	102130902	439
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000154420	retained_intron		6	1	83194543	481
ENSMUSG00000081283	unprocessed_pseudogene	Vmn1r-ps104	ENSMUST00000120960	unprocessed_pseudogene		13	1	22449670	771
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000130917	retained_intron		6	1	83195102	717
ENSMUSG00000097090	antisense	Gm26724	ENSMUST00000180434	antisense		17	1	27201032	1650
ENSMUSG00000031865	protein_coding	Dctn1	ENSMUST00000153793	retained_intron		6	1	83197014	839
ENSMUSG00000117856	processed_pseudogene	Gm6937	ENSMUST00000235531	processed_pseudogene		19	1	42159669	609
ENSMUSG00000058063	protein_coding	Trim31	ENSMUST00000078438	protein_coding	principal1	17	1	36898118	2257
ENSMUSG00000086727	protein_coding	4931428L18Rik	ENSMUST00000233331	protein_coding	principal1	1	-1	31222617	1765
ENSMUSG00000086727	protein_coding	4931428L18Rik	ENSMUST00000152491	protein_coding	principal1	1	-1	30999904	1163
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000199159	retained_intron		3	1	94479117	1193
ENSMUSG00000086727	protein_coding	4931428L18Rik	ENSMUST00000187892	protein_coding	principal1	1	-1	31222597	1717
ENSMUSG00000044857	protein_coding	Lemd2	ENSMUST00000236082	retained_intron		17	-1	27200471	2808
ENSMUSG00000086727	protein_coding	4931428L18Rik	ENSMUST00000188605	processed_transcript		1	-1	31096454	881
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000152967	retained_intron		1	1	150438932	3200
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000198067	processed_transcript		3	1	94482555	669
ENSMUSG00000073878	protein_coding	Gm13304	ENSMUST00000098123	protein_coding	principal1	4	1	42114817	837
ENSMUSG00000086727	protein_coding	4931428L18Rik	ENSMUST00000127775	processed_transcript		1	-1	31222657	1009
ENSMUSG00000029638	protein_coding	Glcci1	ENSMUST00000064285	protein_coding	principal3	6	1	8509600	6200
ENSMUSG00000027901	protein_coding	Dennd2d	ENSMUST00000029508	protein_coding	alternative2	3	1	106482431	4050
ENSMUSG00000086727	protein_coding	4931428L18Rik	ENSMUST00000187659	processed_transcript		1	-1	31222628	423
ENSMUSG00000026709	protein_coding	Dars2	ENSMUST00000162654	retained_intron		1	-1	161070642	4015
ENSMUSG00000082307	processed_pseudogene	Gm13418	ENSMUST00000119097	processed_pseudogene		2	1	24494068	944
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000128417	retained_intron		1	1	150440439	1332
ENSMUSG00000027901	protein_coding	Dennd2d	ENSMUST00000149225	nonsense_mediated_decay		3	1	106482450	685
ENSMUSG00000026709	protein_coding	Dars2	ENSMUST00000161748	processed_transcript		1	-1	161047142	1102
ENSMUSG00000086727	protein_coding	4931428L18Rik	ENSMUST00000135245	processed_transcript		1	-1	31222684	889
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000124484	protein_coding		1	1	150445918	575
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000138718	retained_intron		1	1	150447455	470
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000197699	processed_transcript		3	1	94482722	2441
ENSMUSG00000029638	protein_coding	Glcci1	ENSMUST00000162383	protein_coding		6	1	8511227	537
ENSMUSG00000026709	protein_coding	Dars2	ENSMUST00000160759	retained_intron		1	-1	161070656	2838
ENSMUSG00000006005	protein_coding	Tpr	ENSMUST00000130779	processed_transcript		1	1	150448871	229
ENSMUSG00000027901	protein_coding	Dennd2d	ENSMUST00000183271	protein_coding	principal3	3	1	106486050	2050
ENSMUSG00000026709	protein_coding	Dars2	ENSMUST00000160591	retained_intron		1	-1	161070607	2126
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000199148	retained_intron		3	1	94484327	2932
ENSMUSG00000026709	protein_coding	Dars2	ENSMUST00000162398	retained_intron		1	-1	161063469	662
ENSMUSG00000060402	protein_coding	Chst8	ENSMUST00000238947	protein_coding	principal1	7	-1	34753812	2699
ENSMUSG00000027901	protein_coding	Dennd2d	ENSMUST00000193651	retained_intron		3	1	106487418	659
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000197677	protein_coding		3	1	94484364	779
ENSMUSG00000027901	protein_coding	Dennd2d	ENSMUST00000195305	retained_intron		3	1	106493175	2125
ENSMUSG00000029638	protein_coding	Glcci1	ENSMUST00000162567	protein_coding	alternative2	6	1	8520020	1638
ENSMUSG00000026709	protein_coding	Dars2	ENSMUST00000159922	processed_transcript		1	-1	161070630	437
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000198384	protein_coding		3	1	94484371	726
ENSMUSG00000029638	protein_coding	Glcci1	ENSMUST00000161217	protein_coding	alternative2	6	1	8520058	1488
ENSMUSG00000060402	protein_coding	Chst8	ENSMUST00000078686	protein_coding	principal1	7	-1	34812686	2372
ENSMUSG00000029638	protein_coding	Glcci1	ENSMUST00000161494	protein_coding		6	1	8537816	3248
ENSMUSG00000060402	protein_coding	Chst8	ENSMUST00000205259	protein_coding	principal1	7	-1	34812686	1980
ENSMUSG00000029638	protein_coding	Glcci1	ENSMUST00000162206	processed_transcript		6	1	8579705	438
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000198796	retained_intron		3	1	94485277	3363
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000196985	retained_intron		3	1	94486646	889
ENSMUSG00000041506	protein_coding	Rrp9	ENSMUST00000123464	processed_transcript		9	1	106475963	449
ENSMUSG00000028137	protein_coding	Celf3	ENSMUST00000197033	retained_intron		3	1	94487202	855
ENSMUSG00000060402	protein_coding	Chst8	ENSMUST00000154629	protein_coding		7	-1	34812686	2079
ENSMUSG00000060402	protein_coding	Chst8	ENSMUST00000135295	processed_transcript		7	-1	34812711	830
ENSMUSG00000107705	protein_coding	Gm45062	ENSMUST00000162564	nonsense_mediated_decay	principal1	6	1	8259450	5842
ENSMUSG00000060402	protein_coding	Chst8	ENSMUST00000206207	processed_transcript		7	-1	34697450	3179
ENSMUSG00000060402	protein_coding	Chst8	ENSMUST00000205390	processed_transcript		7	-1	34812672	569
ENSMUSG00000071176	protein_coding	Arhgef10	ENSMUST00000084207	protein_coding	principal4	8	1	14911663	5528
ENSMUSG00000050217	protein_coding	Lgsn	ENSMUST00000062560	protein_coding	principal1	1	1	31176401	1937
ENSMUSG00000044857	protein_coding	Lemd2	ENSMUST00000055117	protein_coding	principal1	17	-1	27204469	2627
ENSMUSG00000027981	protein_coding	Rnpc3	ENSMUST00000153853	protein_coding		3	-1	113629900	4679
ENSMUSG00000106076	processed_pseudogene	Gm43840	ENSMUST00000199444	processed_pseudogene		5	-1	63990871	484
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000058860	protein_coding	principal1	7	-1	30956803	2419
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000202697	protein_coding		5	-1	73071175	5743
ENSMUSG00000001525	protein_coding	Tubb5	ENSMUST00000001566	protein_coding	principal1	17	-1	35838306	2649
ENSMUSG00000027259	protein_coding	Adal	ENSMUST00000028702	protein_coding		2	1	121140432	2471
ENSMUSG00000071176	protein_coding	Arhgef10	ENSMUST00000160619	retained_intron		8	1	14911717	3289
ENSMUSG00000044857	protein_coding	Lemd2	ENSMUST00000237257	protein_coding		17	-1	27203676	412
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000027475	protein_coding	principal3	1	1	87327003	5724
ENSMUSG00000050217	protein_coding	Lgsn	ENSMUST00000161773	protein_coding		1	1	31189470	1586
ENSMUSG00000035984	protein_coding	Nme5	ENSMUST00000134875	nonsense_mediated_decay		18	-1	34579100	729
ENSMUSG00000071176	protein_coding	Arhgef10	ENSMUST00000161162	protein_coding		8	1	14911724	1912
ENSMUSG00000099796	processed_pseudogene	Gm7893	ENSMUST00000189666	processed_pseudogene		1	1	31164549	225
ENSMUSG00000044857	protein_coding	Lemd2	ENSMUST00000237625	retained_intron		17	-1	27193480	1228
ENSMUSG00000082370	processed_pseudogene	Gm12313	ENSMUST00000121347	processed_pseudogene		11	1	70426553	421
ENSMUSG00000044857	protein_coding	Lemd2	ENSMUST00000236101	retained_intron		17	-1	27195690	856
ENSMUSG00000099620	unprocessed_pseudogene	Mrgprb13	ENSMUST00000188191	unprocessed_pseudogene		7	1	48311304	985
ENSMUSG00000071176	protein_coding	Arhgef10	ENSMUST00000110800	protein_coding	alternative2	8	1	14911738	5336
ENSMUSG00000044857	protein_coding	Lemd2	ENSMUST00000236492	retained_intron		17	-1	27196200	486
ENSMUSG00000001525	protein_coding	Tubb5	ENSMUST00000173253	retained_intron		17	-1	35837060	979
ENSMUSG00000080814	processed_pseudogene	Gm12314	ENSMUST00000118104	processed_pseudogene		11	-1	70429554	538
ENSMUSG00000027259	protein_coding	Adal	ENSMUST00000110665	protein_coding		2	1	121140439	2356
ENSMUSG00000071176	protein_coding	Arhgef10	ENSMUST00000163062	protein_coding		8	1	14945301	4219
ENSMUSG00000044857	protein_coding	Lemd2	ENSMUST00000236055	retained_intron		17	-1	27201677	820
ENSMUSG00000021054	protein_coding	Sgpp1	ENSMUST00000021450	protein_coding	principal1	12	-1	75735729	3323
ENSMUSG00000001525	protein_coding	Tubb5	ENSMUST00000134978	protein_coding		17	-1	35838208	762
ENSMUSG00000071176	protein_coding	Arhgef10	ENSMUST00000162444	processed_transcript		8	1	14990359	377
ENSMUSG00000036766	protein_coding	Dner	ENSMUST00000049126	protein_coding	principal1	1	-1	84696221	3632
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000135454	protein_coding	principal1	4	1	107889813	2997
ENSMUSG00000015749	protein_coding	Anp32e	ENSMUST00000165307	protein_coding	principal3	3	1	95929246	3274
ENSMUSG00000001525	protein_coding	Tubb5	ENSMUST00000156050	retained_intron		17	-1	35838217	711
ENSMUSG00000095845	protein_coding	Gm5741	ENSMUST00000177563	protein_coding	principal1	8	-1	85067982	328
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000106726	protein_coding		4	1	107889825	515
ENSMUSG00000071176	protein_coding	Arhgef10	ENSMUST00000162636	processed_transcript		8	1	14996136	2178
ENSMUSG00000021054	protein_coding	Sgpp1	ENSMUST00000220285	protein_coding		12	-1	75735696	3200
ENSMUSG00000108451	unprocessed_pseudogene	Olfr185-ps1	ENSMUST00000205894	unprocessed_pseudogene		16	-1	59022861	881
ENSMUSG00000118503	unitary_pseudogene	AC141882.1	ENSMUST00000239096	unitary_pseudogene		17	-1	27217478	188
ENSMUSG00000028139	protein_coding	Riiad1	ENSMUST00000029785	protein_coding	principal1	3	-1	94473591	630
ENSMUSG00000001143	protein_coding	Lman2l	ENSMUST00000192969	protein_coding		1	-1	36439668	705
ENSMUSG00000035984	protein_coding	Nme5	ENSMUST00000079287	protein_coding	principal1	18	-1	34579115	843
ENSMUSG00000100687	unprocessed_pseudogene	Gm18357	ENSMUST00000188184	unprocessed_pseudogene		7	1	48363921	580
ENSMUSG00000036766	protein_coding	Dner	ENSMUST00000191306	retained_intron		1	-1	84696019	2192
ENSMUSG00000015749	protein_coding	Anp32e	ENSMUST00000015893	protein_coding	alternative2	3	1	95929278	1381
ENSMUSG00000106219	lincRNA	5830416I19Rik	ENSMUST00000198687	lincRNA		5	1	64044978	2627
ENSMUSG00000036766	protein_coding	Dner	ENSMUST00000185606	protein_coding		1	-1	84640485	573
ENSMUSG00000027259	protein_coding	Adal	ENSMUST00000130221	retained_intron		2	1	121140428	2947
ENSMUSG00000035984	protein_coding	Nme5	ENSMUST00000155114	nonsense_mediated_decay		18	-1	34579087	460
ENSMUSG00000036766	protein_coding	Dner	ENSMUST00000191546	protein_coding		1	-1	84623841	587
ENSMUSG00000015749	protein_coding	Anp32e	ENSMUST00000169426	protein_coding		3	1	95929283	915
ENSMUSG00000047960	protein_coding	Olfr186	ENSMUST00000216415	protein_coding	principal1	16	-1	59030278	2323
ENSMUSG00000027259	protein_coding	Adal	ENSMUST00000146750	retained_intron		2	1	121140444	2872
ENSMUSG00000104396	TEC	Gm37959	ENSMUST00000191700	TEC		1	-1	84395399	2897
ENSMUSG00000047960	protein_coding	Olfr186	ENSMUST00000206463	protein_coding	principal1	16	-1	59030291	2208
ENSMUSG00000102481	TEC	Gm37925	ENSMUST00000195352	TEC		1	-1	84669443	4255
ENSMUSG00000028139	protein_coding	Riiad1	ENSMUST00000183915	processed_transcript		3	-1	94480341	389
ENSMUSG00000015749	protein_coding	Anp32e	ENSMUST00000171368	protein_coding		3	1	95929325	878
ENSMUSG00000035984	protein_coding	Nme5	ENSMUST00000154342	processed_transcript		18	-1	34579083	849
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000172794	protein_coding	alternative2	1	1	87327029	4029
ENSMUSG00000027259	protein_coding	Adal	ENSMUST00000152164	retained_intron		2	1	121150072	1601
ENSMUSG00000047960	protein_coding	Olfr186	ENSMUST00000062380	protein_coding	principal1	16	-1	59027927	1005
ENSMUSG00000027981	protein_coding	Rnpc3	ENSMUST00000092154	protein_coding	principal3	3	-1	113630149	3888
ENSMUSG00000083880	processed_pseudogene	Hspe1-ps6	ENSMUST00000120275	processed_pseudogene		4	-1	96072706	283
ENSMUSG00000094162	unprocessed_pseudogene	Ccl19-ps3	ENSMUST00000179634	unprocessed_pseudogene		4	1	42132559	324
ENSMUSG00000015749	protein_coding	Anp32e	ENSMUST00000168106	protein_coding		3	1	95929386	2890
ENSMUSG00000105059	TEC	Gm42498	ENSMUST00000199981	TEC		5	-1	128597956	1372
ENSMUSG00000087577	antisense	Gm13299	ENSMUST00000133644	antisense		4	-1	42153435	425
ENSMUSG00000015749	protein_coding	Anp32e	ENSMUST00000170213	nonsense_mediated_decay		3	1	95929541	637
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000174583	processed_transcript		1	1	87327030	3015
ENSMUSG00000027981	protein_coding	Rnpc3	ENSMUST00000106536	protein_coding	principal3	3	-1	113630149	1839
ENSMUSG00000089862	protein_coding	Umad1	ENSMUST00000159335	protein_coding	alternative2	6	1	8259288	2615
ENSMUSG00000028139	protein_coding	Riiad1	ENSMUST00000184619	processed_transcript		3	-1	94472922	257
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000164992	protein_coding		1	1	87327033	2330
ENSMUSG00000083940	processed_pseudogene	Gm11298	ENSMUST00000120503	processed_pseudogene		13	1	22464296	1799
ENSMUSG00000089862	protein_coding	Umad1	ENSMUST00000159378	protein_coding		6	1	8259350	429
ENSMUSG00000015749	protein_coding	Anp32e	ENSMUST00000170125	protein_coding		3	1	95929582	413
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000187038	retained_intron		1	1	87327046	1962
ENSMUSG00000027981	protein_coding	Rnpc3	ENSMUST00000106535	protein_coding	alternative1	3	-1	113630149	2616
ENSMUSG00000089862	protein_coding	Umad1	ENSMUST00000162034	protein_coding	alternative2	6	1	8259382	2015
ENSMUSG00000027259	protein_coding	Adal	ENSMUST00000147271	processed_transcript		2	1	121140453	706
ENSMUSG00000089862	protein_coding	Umad1	ENSMUST00000160705	protein_coding	principal4	6	1	8259428	624
ENSMUSG00000015749	protein_coding	Anp32e	ENSMUST00000171035	protein_coding		3	1	95930536	495
ENSMUSG00000027981	protein_coding	Rnpc3	ENSMUST00000132220	processed_transcript		3	-1	113615440	408
ENSMUSG00000027259	protein_coding	Adal	ENSMUST00000110662	protein_coding		2	1	121140499	1231
ENSMUSG00000072591	lincRNA	Fzd10os	ENSMUST00000140028	lincRNA		5	-1	128585378	287
ENSMUSG00000026937	protein_coding	Lcn5	ENSMUST00000100312	protein_coding	alternative2	2	1	25657952	660
ENSMUSG00000015749	protein_coding	Anp32e	ENSMUST00000167876	protein_coding		3	1	95932801	708
ENSMUSG00000089862	protein_coding	Umad1	ENSMUST00000159433	protein_coding	alternative2	6	1	8259430	2025
ENSMUSG00000027259	protein_coding	Adal	ENSMUST00000156132	retained_intron		2	1	121140521	695
ENSMUSG00000109803	antisense	Gm45604	ENSMUST00000209665	antisense		10	1	125308912	550
ENSMUSG00000015749	protein_coding	Anp32e	ENSMUST00000168471	retained_intron		3	1	95944204	502
ENSMUSG00000089862	protein_coding	Umad1	ENSMUST00000161400	processed_transcript		6	1	8259444	435
ENSMUSG00000111943	TEC	Gm47862	ENSMUST00000220021	TEC		10	1	125388539	2469
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000173850	processed_transcript		1	1	87327048	2520
ENSMUSG00000106262	TEC	Gm43375	ENSMUST00000196705	TEC		3	1	95940086	2480
ENSMUSG00000027981	protein_coding	Rnpc3	ENSMUST00000123232	processed_transcript		3	-1	113621965	667
ENSMUSG00000089862	protein_coding	Umad1	ENSMUST00000159168	protein_coding	alternative2	6	1	8270466	1975
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000167285	processed_transcript		7	-1	30956176	1968
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000173173	protein_coding		1	1	87327066	2765
ENSMUSG00000068349	protein_coding	Gml	ENSMUST00000096400	protein_coding	principal1	15	-1	74817473	957
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000170442	protein_coding		7	-1	30956239	886
ENSMUSG00000027259	protein_coding	Adal	ENSMUST00000066155	protein_coding	principal1	2	1	121142141	2298
ENSMUSG00000027981	protein_coding	Rnpc3	ENSMUST00000135712	processed_transcript		3	-1	113621316	423
ENSMUSG00000089862	protein_coding	Umad1	ENSMUST00000160253	processed_transcript		6	1	8419678	1728
ENSMUSG00000027981	protein_coding	Rnpc3	ENSMUST00000127068	retained_intron		3	-1	113630079	1532
ENSMUSG00000089735	processed_pseudogene	Gm8428	ENSMUST00000159919	processed_pseudogene		6	-1	8379379	1784
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000172964	nonsense_mediated_decay		1	1	87354446	3721
ENSMUSG00000068349	protein_coding	Gml	ENSMUST00000185253	protein_coding		15	-1	74818813	535
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000174501	protein_coding	principal3	1	1	87354446	3876
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000174605	retained_intron		1	1	87363802	674
ENSMUSG00000068349	protein_coding	Gml	ENSMUST00000164026	protein_coding	principal1	15	-1	74818815	895
ENSMUSG00000041506	protein_coding	Rrp9	ENSMUST00000047721	protein_coding	principal1	9	1	106477269	1586
ENSMUSG00000074890	protein_coding	Lcmt2	ENSMUST00000110674	protein_coding	principal1	2	-1	121140653	3056
ENSMUSG00000095267	protein_coding	Ssty1	ENSMUST00000186035	protein_coding	principal1	Y	1	18089116	1341
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000172976	retained_intron		1	1	87364161	545
ENSMUSG00000095267	protein_coding	Ssty1	ENSMUST00000180056	protein_coding	principal1	Y	1	18090734	699
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000030347	processed_transcript		4	1	107889849	757
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000174535	processed_transcript		1	1	87386317	586
ENSMUSG00000074890	protein_coding	Lcmt2	ENSMUST00000099486	protein_coding		2	-1	121140378	2047
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000174334	protein_coding		1	1	87386338	533
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000106727	protein_coding		4	1	107889863	926
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000171338	processed_transcript		7	-1	30956757	994
ENSMUSG00000001143	protein_coding	Lman2l	ENSMUST00000125304	protein_coding	principal3	1	-1	36445271	3378
ENSMUSG00000041506	protein_coding	Rrp9	ENSMUST00000125630	retained_intron		9	1	106477318	1611
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000173235	nonsense_mediated_decay		1	1	87403667	2826
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000119394	protein_coding		4	1	107889866	741
ENSMUSG00000037418	protein_coding	Best1	ENSMUST00000117346	protein_coding	principal1	19	-1	10001633	2080
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000172736	protein_coding		1	1	87403726	666
ENSMUSG00000041506	protein_coding	Rrp9	ENSMUST00000127400	retained_intron		9	1	106477330	424
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000120473	protein_coding		4	1	107889869	835
ENSMUSG00000037418	protein_coding	Best1	ENSMUST00000235983	protein_coding		19	-1	9998570	1725
ENSMUSG00000026937	protein_coding	Lcn5	ENSMUST00000028306	protein_coding	principal4	2	1	25657955	696
ENSMUSG00000072591	lincRNA	Fzd10os	ENSMUST00000154305	lincRNA		5	-1	128600687	2429
ENSMUSG00000041506	protein_coding	Rrp9	ENSMUST00000217303	retained_intron		9	1	106477725	725
ENSMUSG00000037418	protein_coding	Best1	ENSMUST00000144273	processed_transcript		19	-1	9992915	301
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000173152	protein_coding		1	1	87404916	618
ENSMUSG00000072591	lincRNA	Fzd10os	ENSMUST00000137295	lincRNA		5	-1	128585378	348
ENSMUSG00000041506	protein_coding	Rrp9	ENSMUST00000156796	retained_intron		9	1	106480800	411
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000101127	protein_coding	principal1	5	-1	73256619	11340
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000162228	protein_coding		7	-1	30956757	960
ENSMUSG00000026443	protein_coding	Lrrn2	ENSMUST00000027706	protein_coding	principal1	1	1	132880273	3428
ENSMUSG00000041506	protein_coding	Rrp9	ENSMUST00000185336	nonsense_mediated_decay		9	1	106483854	482
ENSMUSG00000028571	protein_coding	Cyp2j13	ENSMUST00000107078	protein_coding		4	-1	96077546	1493
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000170699	nonsense_mediated_decay		7	-1	30956757	674
ENSMUSG00000001143	protein_coding	Lman2l	ENSMUST00000134594	retained_intron		1	-1	36441872	4062
ENSMUSG00000072591	lincRNA	Fzd10os	ENSMUST00000134673	lincRNA		5	-1	128600693	2087
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000173148	nonsense_mediated_decay		1	1	87404948	566
ENSMUSG00000026937	protein_coding	Lcn5	ENSMUST00000100313	protein_coding	alternative2	2	1	25657955	660
ENSMUSG00000085188	lincRNA	Gm11368	ENSMUST00000139576	lincRNA		13	1	30058677	609
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000172417	protein_coding		7	-1	30956757	648
ENSMUSG00000041506	protein_coding	Rrp9	ENSMUST00000131618	retained_intron		9	1	106484464	860
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000202806	protein_coding		5	-1	73035042	2707
ENSMUSG00000089958	processed_pseudogene	Gm16165	ENSMUST00000160140	processed_pseudogene		9	-1	22670528	795
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000132417	nonsense_mediated_decay		4	1	107889898	2795
ENSMUSG00000026443	protein_coding	Lrrn2	ENSMUST00000159088	processed_transcript		1	1	132880355	658
ENSMUSG00000072591	lincRNA	Fzd10os	ENSMUST00000126472	lincRNA		5	-1	128600654	370
ENSMUSG00000113366	TEC	Gm47259	ENSMUST00000220600	TEC		13	1	30098493	3550
ENSMUSG00000090067	processed_pseudogene	Gm2976	ENSMUST00000160362	processed_pseudogene		9	-1	22480446	513
ENSMUSG00000028571	protein_coding	Cyp2j13	ENSMUST00000097973	protein_coding		4	-1	96077524	1648
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000173663	protein_coding		1	1	87404964	386
ENSMUSG00000001143	protein_coding	Lman2l	ENSMUST00000115011	protein_coding	alternative1	1	-1	36445271	2290
ENSMUSG00000083676	processed_pseudogene	Gm11367	ENSMUST00000117802	processed_pseudogene		13	1	30112474	120
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000108119	protein_coding		7	-1	30956766	849
ENSMUSG00000102709	TEC	Gm38308	ENSMUST00000194934	TEC		1	-1	132945320	1809
ENSMUSG00000072591	lincRNA	Fzd10os	ENSMUST00000091324	lincRNA		5	-1	128600687	2403
ENSMUSG00000026937	protein_coding	Lcn5	ENSMUST00000143401	processed_transcript		2	1	25660922	194
ENSMUSG00000001143	protein_coding	Lman2l	ENSMUST00000001171	nonsense_mediated_decay		1	-1	36445271	2174
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000169496	retained_intron		7	-1	30955450	532
ENSMUSG00000028571	protein_coding	Cyp2j13	ENSMUST00000132513	protein_coding		4	-1	96062029	771
ENSMUSG00000001143	protein_coding	Lman2l	ENSMUST00000152088	protein_coding		1	-1	36428366	634
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000166340	nonsense_mediated_decay		7	-1	30955906	300
ENSMUSG00000001143	protein_coding	Lman2l	ENSMUST00000123583	nonsense_mediated_decay		1	-1	36445271	689
ENSMUSG00000028571	protein_coding	Cyp2j13	ENSMUST00000030305	protein_coding	principal1	4	-1	96077540	4374
ENSMUSG00000035649	protein_coding	Zcchc7	ENSMUST00000154121	protein_coding		4	1	44755877	280
ENSMUSG00000001143	protein_coding	Lman2l	ENSMUST00000193502	retained_intron		1	-1	36445257	1513
ENSMUSG00000058239	protein_coding	Usf2	ENSMUST00000168731	processed_transcript		7	-1	30956650	462
ENSMUSG00000062098	protein_coding	Btbd3	ENSMUST00000075410	protein_coding		2	1	138278493	4940
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000173636	protein_coding		1	1	87407379	773
ENSMUSG00000118637	processed_pseudogene	AL772212.1	ENSMUST00000239271	processed_pseudogene		4	-1	96038410	171
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000125107	protein_coding		4	1	107889899	1551
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000172776	retained_intron		1	1	87420211	558
ENSMUSG00000108546	lincRNA	Gm44662	ENSMUST00000206970	lincRNA		7	1	30916983	412
ENSMUSG00000023021	protein_coding	Cers5	ENSMUST00000109035	protein_coding	alternative2	15	-1	99772462	2775
ENSMUSG00000001891	protein_coding	Ugp2	ENSMUST00000102875	protein_coding	principal3	11	-1	21370477	2683
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000146953	processed_transcript		5	-1	73047001	3088
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000128474	protein_coding		4	1	107889908	296
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000174671	processed_transcript		1	1	87433120	3074
ENSMUSG00000023021	protein_coding	Cers5	ENSMUST00000176248	nonsense_mediated_decay		15	-1	99772465	1883
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000030346	processed_transcript		4	1	107890119	636
ENSMUSG00000001891	protein_coding	Ugp2	ENSMUST00000060895	protein_coding	alternative1	11	-1	21371201	2044
ENSMUSG00000048000	protein_coding	Gigyf2	ENSMUST00000174482	retained_intron		1	1	87443328	778
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000127715	processed_transcript		4	1	107890227	825
ENSMUSG00000001891	protein_coding	Ugp2	ENSMUST00000143890	processed_transcript		11	-1	21323502	494
ENSMUSG00000062098	protein_coding	Btbd3	ENSMUST00000091556	protein_coding	principal1	2	1	138256565	4657
ENSMUSG00000001891	protein_coding	Ugp2	ENSMUST00000133343	processed_transcript		11	-1	21329892	558
ENSMUSG00000033953	protein_coding	Ppp3r1	ENSMUST00000102880	protein_coding	principal1	11	1	17159263	2859
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000153593	processed_transcript		4	1	107890240	868
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000156888	retained_intron		4	1	107893174	487
ENSMUSG00000087253	processed_transcript	Gm12043	ENSMUST00000131570	processed_transcript		11	1	21370400	2788
ENSMUSG00000028608	protein_coding	Czib	ENSMUST00000134254	protein_coding		4	1	107893370	443
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000156661	retained_intron		5	-1	73071577	5056
ENSMUSG00000062098	protein_coding	Btbd3	ENSMUST00000128656	processed_transcript		2	1	138256670	640
ENSMUSG00000104428	processed_pseudogene	Gm18299	ENSMUST00000192026	processed_pseudogene		1	-1	9440376	636
ENSMUSG00000079436	protein_coding	Kcnj13	ENSMUST00000113212	protein_coding	principal1	1	-1	87394729	1270
ENSMUSG00000033953	protein_coding	Ppp3r1	ENSMUST00000154425	processed_transcript		11	1	17192844	791
ENSMUSG00000062098	protein_coding	Btbd3	ENSMUST00000155646	processed_transcript		2	1	138256662	453
ENSMUSG00000023021	protein_coding	Cers5	ENSMUST00000023762	protein_coding	principal2	15	-1	99772601	2096
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000202381	protein_coding		5	-1	73088420	4392
ENSMUSG00000102272	processed_pseudogene	Gm7512	ENSMUST00000195217	processed_pseudogene		1	1	9450579	1170
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000201200	retained_intron		5	-1	73050512	376
ENSMUSG00000023021	protein_coding	Cers5	ENSMUST00000176970	protein_coding		15	-1	99747070	819
ENSMUSG00000056978	protein_coding	Hamp2	ENSMUST00000074671	protein_coding	alternative2	7	-1	30924181	420
ENSMUSG00000023021	protein_coding	Cers5	ENSMUST00000175876	protein_coding		15	-1	99772885	884
ENSMUSG00000056978	protein_coding	Hamp2	ENSMUST00000205641	protein_coding		7	-1	30924681	424
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000175890	processed_transcript		5	-1	73083289	606
ENSMUSG00000079436	protein_coding	Kcnj13	ENSMUST00000174179	protein_coding		1	-1	87389389	261
ENSMUSG00000023021	protein_coding	Cers5	ENSMUST00000176627	protein_coding		15	-1	99772092	447
ENSMUSG00000092014	processed_pseudogene	Gm4468	ENSMUST00000170206	processed_pseudogene		15	-1	99810582	294
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000143665	retained_intron		5	-1	73054824	520
ENSMUSG00000056978	protein_coding	Hamp2	ENSMUST00000217812	protein_coding	principal2	7	-1	30924181	437
ENSMUSG00000039166	protein_coding	Akap7	ENSMUST00000100012	protein_coding		10	-1	25200158	2321
ENSMUSG00000021275	protein_coding	Tecpr2	ENSMUST00000165978	protein_coding	principal1	12	1	110889264	7778
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000201841	retained_intron		5	-1	73065233	543
ENSMUSG00000090357	antisense	Gm17077	ENSMUST00000133179	antisense		7	1	30955825	279
ENSMUSG00000039166	protein_coding	Akap7	ENSMUST00000175979	processed_transcript		10	-1	25238717	2391
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000201277	protein_coding		5	-1	73071299	723
ENSMUSG00000043241	protein_coding	Upf2	ENSMUST00000060092	protein_coding	principal1	2	1	5951469	5174
ENSMUSG00000039166	protein_coding	Akap7	ENSMUST00000220347	protein_coding		10	-1	25220691	557
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000202413	retained_intron		5	-1	73076015	404
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000201405	processed_transcript		5	-1	73098379	402
ENSMUSG00000043241	protein_coding	Upf2	ENSMUST00000128200	protein_coding		2	1	6023339	2826
ENSMUSG00000021275	protein_coding	Tecpr2	ENSMUST00000223246	retained_intron		12	1	110889276	4194
ENSMUSG00000010554	protein_coding	Mettl16	ENSMUST00000010698	protein_coding		11	1	74770830	2073
ENSMUSG00000043241	protein_coding	Upf2	ENSMUST00000144901	processed_transcript		2	1	6050427	544
ENSMUSG00000067916	protein_coding	Zfp991	ENSMUST00000084149	protein_coding	principal1	4	1	147132038	2813
ENSMUSG00000021275	protein_coding	Tecpr2	ENSMUST00000169597	protein_coding	principal1	12	1	110889312	7780
ENSMUSG00000010554	protein_coding	Mettl16	ENSMUST00000141755	protein_coding	principal1	11	1	74770830	12584
ENSMUSG00000050440	protein_coding	Hamp	ENSMUST00000062620	protein_coding	principal1	7	-1	30944032	410
ENSMUSG00000067916	protein_coding	Zfp991	ENSMUST00000151022	protein_coding		4	1	147150494	234
ENSMUSG00000035649	protein_coding	Zcchc7	ENSMUST00000107824	protein_coding	principal1	4	1	44756568	2503
ENSMUSG00000010554	protein_coding	Mettl16	ENSMUST00000128504	protein_coding		11	1	74770916	450
ENSMUSG00000108352	unprocessed_pseudogene	Usf2-ps1	ENSMUST00000206657	unprocessed_pseudogene		7	-1	30927147	311
ENSMUSG00000097750	antisense	Gm4673	ENSMUST00000206345	antisense		7	1	30956909	946
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000153923	retained_intron		5	-1	73168440	3007
ENSMUSG00000021275	protein_coding	Tecpr2	ENSMUST00000223210	nonsense_mediated_decay		12	1	110895473	6946
ENSMUSG00000046574	protein_coding	Prr12	ENSMUST00000057293	protein_coding	principal1	7	-1	45052881	7023
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000153903	protein_coding		5	-1	73119844	600
ENSMUSG00000027900	protein_coding	Dram2	ENSMUST00000067630	protein_coding	principal1	3	1	106547798	3271
ENSMUSG00000021275	protein_coding	Tecpr2	ENSMUST00000221605	retained_intron		12	1	110915051	658
ENSMUSG00000010554	protein_coding	Mettl16	ENSMUST00000092912	nonsense_mediated_decay		11	1	74770925	2054
ENSMUSG00000096942	processed_pseudogene	Rps19-ps6	ENSMUST00000181233	processed_pseudogene		12	1	110898114	438
ENSMUSG00000020102	protein_coding	Slc16a7	ENSMUST00000211781	protein_coding	principal1	10	-1	125328963	10981
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000152631	protein_coding		5	-1	73122254	495
ENSMUSG00000097750	antisense	Gm4673	ENSMUST00000181395	antisense		7	1	30957409	3660
ENSMUSG00000010554	protein_coding	Mettl16	ENSMUST00000144692	retained_intron		11	1	74803324	761
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000148433	retained_intron		5	-1	73256425	1899
ENSMUSG00000111164	processed_pseudogene	Gm47803	ENSMUST00000215061	processed_pseudogene		9	-1	100604988	135
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000176910	protein_coding		5	-1	73191879	449
ENSMUSG00000010554	protein_coding	Mettl16	ENSMUST00000134571	processed_transcript		11	1	74808529	656
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000123446	retained_intron		5	-1	73256589	1641
ENSMUSG00000029171	protein_coding	Pgm2	ENSMUST00000087324	protein_coding	principal1	5	1	64092950	2369
ENSMUSG00000035649	protein_coding	Zcchc7	ENSMUST00000144436	retained_intron		4	1	44756588	3612
ENSMUSG00000042567	protein_coding	Nek10	ENSMUST00000224491	protein_coding	principal1	14	1	14803415	9567
ENSMUSG00000035649	protein_coding	Zcchc7	ENSMUST00000143385	protein_coding		4	1	44756639	437
ENSMUSG00000020102	protein_coding	Slc16a7	ENSMUST00000063318	protein_coding	principal1	10	-1	125328535	2419
ENSMUSG00000027900	protein_coding	Dram2	ENSMUST00000129053	retained_intron		3	1	106547827	799
ENSMUSG00000039166	protein_coding	Akap7	ENSMUST00000041984	protein_coding	principal1	10	-1	25299164	2092
ENSMUSG00000035649	protein_coding	Zcchc7	ENSMUST00000142714	nonsense_mediated_decay		4	1	44756647	2548
ENSMUSG00000042567	protein_coding	Nek10	ENSMUST00000112631	protein_coding		14	1	14820765	3386
ENSMUSG00000093436	sense_overlapping	Gm20646	ENSMUST00000199521	sense_overlapping		1	1	42694925	660
ENSMUSG00000035649	protein_coding	Zcchc7	ENSMUST00000067521	retained_intron		4	1	44760444	4709
ENSMUSG00000093436	sense_overlapping	Gm20646	ENSMUST00000176807	sense_overlapping		1	1	42694925	1316
ENSMUSG00000029171	protein_coding	Pgm2	ENSMUST00000199093	nonsense_mediated_decay		5	1	64103390	871
ENSMUSG00000070733	protein_coding	Fryl	ENSMUST00000094700	protein_coding	principal1	5	-1	73148136	9852
ENSMUSG00000039166	protein_coding	Akap7	ENSMUST00000176258	protein_coding		10	-1	25296100	720
ENSMUSG00000045515	protein_coding	Pou3f3	ENSMUST00000239323	protein_coding	principal1	1	1	42694925	7330
ENSMUSG00000029171	protein_coding	Pgm2	ENSMUST00000129152	retained_intron		5	1	64106441	594
ENSMUSG00000046574	protein_coding	Prr12	ENSMUST00000210410	retained_intron		7	-1	45034394	1487
ENSMUSG00000039166	protein_coding	Akap7	ENSMUST00000095779	protein_coding		10	-1	25299107	919
ENSMUSG00000027900	protein_coding	Dram2	ENSMUST00000134396	protein_coding		3	1	106547831	393
ENSMUSG00000029171	protein_coding	Pgm2	ENSMUST00000197577	protein_coding		5	1	64112101	485
ENSMUSG00000035649	protein_coding	Zcchc7	ENSMUST00000107823	processed_transcript		4	1	44907202	701
ENSMUSG00000078970	protein_coding	Wdr92	ENSMUST00000046955	protein_coding	principal1	11	1	17211918	2002
ENSMUSG00000020102	protein_coding	Slc16a7	ENSMUST00000210780	protein_coding	principal1	10	-1	125389465	2562
ENSMUSG00000045515	protein_coding	Pou3f3	ENSMUST00000054883	protein_coding	principal1	1	1	42695768	7409
ENSMUSG00000103411	processed_pseudogene	Gm18300	ENSMUST00000192792	processed_pseudogene		1	-1	9501522	1406
ENSMUSG00000039166	protein_coding	Akap7	ENSMUST00000177124	protein_coding		10	-1	25297073	397
ENSMUSG00000035649	protein_coding	Zcchc7	ENSMUST00000147272	protein_coding		4	1	44923118	4251
ENSMUSG00000037432	protein_coding	Fer1l5	ENSMUST00000179162	protein_coding	principal1	1	1	36372291	6315
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000111741	protein_coding	alternative1	19	1	53140443	4426
ENSMUSG00000039166	protein_coding	Akap7	ENSMUST00000176231	protein_coding		10	-1	25307870	236
ENSMUSG00000112371	processed_pseudogene	Gm7791	ENSMUST00000219066	processed_pseudogene		10	1	25251500	539
ENSMUSG00000035649	protein_coding	Zcchc7	ENSMUST00000126968	nonsense_mediated_decay		4	1	44925995	586
ENSMUSG00000020102	protein_coding	Slc16a7	ENSMUST00000105257	protein_coding	principal1	10	-1	125308816	2238
ENSMUSG00000027900	protein_coding	Dram2	ENSMUST00000121034	protein_coding	principal1	3	1	106547864	2035
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000236417	retained_intron		19	1	53140477	1278
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000235754	protein_coding		19	1	53140477	2967
ENSMUSG00000042567	protein_coding	Nek10	ENSMUST00000063220	processed_transcript		14	1	14860926	1566
ENSMUSG00000037432	protein_coding	Fer1l5	ENSMUST00000202030	nonsense_mediated_decay		1	1	36385464	1420
ENSMUSG00000025872	protein_coding	Thoc3	ENSMUST00000026990	protein_coding	principal1	13	-1	54468849	2335
ENSMUSG00000097063	processed_transcript	Pantr2	ENSMUST00000180589	lincRNA		1	-1	42713454	463
ENSMUSG00000112352	antisense	Gm40617	ENSMUST00000218840	antisense		10	1	25298609	2420
ENSMUSG00000078970	protein_coding	Wdr92	ENSMUST00000151431	processed_transcript		11	1	17182107	1550
ENSMUSG00000042567	protein_coding	Nek10	ENSMUST00000134866	retained_intron		14	1	14865222	3312
ENSMUSG00000042567	protein_coding	Nek10	ENSMUST00000136826	nonsense_mediated_decay		14	1	14930575	1446
ENSMUSG00000020102	protein_coding	Slc16a7	ENSMUST00000210069	protein_coding		10	-1	125342179	711
ENSMUSG00000027900	protein_coding	Dram2	ENSMUST00000135740	retained_intron		3	1	106547870	600
ENSMUSG00000097063	processed_transcript	Pantr2	ENSMUST00000192894	TEC		1	-1	42708052	981
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000028170	protein_coding	principal3	2	1	28513326	3590
ENSMUSG00000025872	protein_coding	Thoc3	ENSMUST00000151158	processed_transcript		13	-1	54468788	843
ENSMUSG00000042567	protein_coding	Nek10	ENSMUST00000112630	protein_coding	principal1	14	1	14820815	3348
ENSMUSG00000061544	protein_coding	Zfp229	ENSMUST00000182827	protein_coding		17	1	21730795	640
ENSMUSG00000020102	protein_coding	Slc16a7	ENSMUST00000209246	processed_transcript		10	-1	125389368	292
ENSMUSG00000025872	protein_coding	Thoc3	ENSMUST00000135404	retained_intron		13	-1	54468826	465
ENSMUSG00000027900	protein_coding	Dram2	ENSMUST00000029507	protein_coding		3	1	106547872	1891
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000238699	protein_coding		2	1	28527850	2725
ENSMUSG00000061544	protein_coding	Zfp229	ENSMUST00000182334	processed_transcript		17	1	21733680	422
ENSMUSG00000105634	processed_pseudogene	Gm43367	ENSMUST00000199986	processed_pseudogene		5	-1	45657572	625
ENSMUSG00000117794	lincRNA	Gm50328	ENSMUST00000236878	lincRNA		17	1	27244854	1711
ENSMUSG00000061544	protein_coding	Zfp229	ENSMUST00000182923	processed_transcript		17	1	21733713	365
ENSMUSG00000104665	TEC	Gm43366	ENSMUST00000199829	TEC		5	1	45660067	2655
ENSMUSG00000037432	protein_coding	Fer1l5	ENSMUST00000140452	nonsense_mediated_decay		1	1	36416888	1723
ENSMUSG00000114448	TEC	C630044B11Rik	ENSMUST00000225162	TEC		13	1	58812153	2211
ENSMUSG00000104986	TEC	1600023N17Rik	ENSMUST00000196242	TEC		5	-1	45669708	1007
ENSMUSG00000114896	TEC	Gm34245	ENSMUST00000224384	TEC		13	-1	59078296	2857
ENSMUSG00000099664	lincRNA	Gm28511	ENSMUST00000191594	lincRNA		8	1	91865871	450
ENSMUSG00000027900	protein_coding	Dram2	ENSMUST00000144746	protein_coding		3	1	106547877	440
ENSMUSG00000114218	antisense	Gm47423	ENSMUST00000225867	antisense		13	-1	58826994	2086
ENSMUSG00000086567	processed_pseudogene	Gm2830	ENSMUST00000140330	processed_pseudogene		13	-1	54500089	385
ENSMUSG00000061544	protein_coding	Zfp229	ENSMUST00000183192	protein_coding		17	1	21733724	653
ENSMUSG00000027900	protein_coding	Dram2	ENSMUST00000132923	protein_coding		3	1	106547877	855
ENSMUSG00000082416	processed_pseudogene	Gm11414	ENSMUST00000121795	processed_pseudogene		4	-1	83500761	263
ENSMUSG00000038206	protein_coding	Fbxo8	ENSMUST00000156840	retained_intron		8	1	56551090	2466
ENSMUSG00000099812	lincRNA	Gm28515	ENSMUST00000189823	lincRNA		8	-1	91913066	2530
ENSMUSG00000061544	protein_coding	Zfp229	ENSMUST00000182603	protein_coding	principal1	17	1	21735912	4315
ENSMUSG00000066116	processed_pseudogene	Gm10154	ENSMUST00000084445	processed_pseudogene		4	-1	83505538	354
ENSMUSG00000027900	protein_coding	Dram2	ENSMUST00000151465	protein_coding		3	1	106547881	691
ENSMUSG00000117916	lincRNA	9630028I04Rik	ENSMUST00000235429	lincRNA		17	-1	27242659	2149
ENSMUSG00000061544	protein_coding	Zfp229	ENSMUST00000065871	protein_coding	principal1	17	1	21733724	4525
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000237301	protein_coding	principal3	19	1	53140503	4003
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000113893	protein_coding	alternative2	2	1	28533355	3683
ENSMUSG00000095054	processed_pseudogene	Gm13146	ENSMUST00000118508	processed_pseudogene		4	1	147187708	780
ENSMUSG00000117916	lincRNA	9630028I04Rik	ENSMUST00000236498	lincRNA		17	-1	27248066	2579
ENSMUSG00000074264	protein_coding	Amy1	ENSMUST00000067980	protein_coding	principal1	3	-1	113577830	1985
ENSMUSG00000074680	protein_coding	Defb26	ENSMUST00000099205	protein_coding	principal1	2	-1	152511692	561
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000238130	protein_coding	alternative1	19	1	53140517	2911
ENSMUSG00000111167	lincRNA	Gm39321	ENSMUST00000217076	lincRNA		9	1	42141993	1340
ENSMUSG00000074264	protein_coding	Amy1	ENSMUST00000106540	protein_coding	principal1	3	-1	113574762	1771
ENSMUSG00000043357	protein_coding	Olfr187	ENSMUST00000207673	protein_coding	principal1	16	-1	59039767	1322
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000235133	protein_coding		19	1	53141574	473
ENSMUSG00000111167	lincRNA	Gm39321	ENSMUST00000216597	lincRNA		9	1	42142087	2075
ENSMUSG00000111167	lincRNA	Gm39321	ENSMUST00000217090	lincRNA		9	1	42142361	1575
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000237224	protein_coding	alternative1	19	1	53141597	2719
ENSMUSG00000024857	protein_coding	Cabp2	ENSMUST00000159593	protein_coding		19	1	4081578	387
ENSMUSG00000019731	protein_coding	Slc35e1	ENSMUST00000152080	protein_coding	principal1	8	-1	72492614	4383
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000100241	protein_coding	alternative2	2	1	28533542	3102
ENSMUSG00000074264	protein_coding	Amy1	ENSMUST00000172885	retained_intron		3	-1	113562018	565
ENSMUSG00000043357	protein_coding	Olfr187	ENSMUST00000206428	protein_coding	principal1	16	-1	59036757	978
ENSMUSG00000096653	TR_V_gene	Trav15d-1-dv6d-1	ENSMUST00000103616	TR_V_gene	principal5	14	1	52863299	418
ENSMUSG00000019731	protein_coding	Slc35e1	ENSMUST00000141352	retained_intron		8	-1	72492217	720
ENSMUSG00000096653	TR_V_gene	Trav15d-1-dv6d-1	ENSMUST00000186370	TR_V_gene	alternative2	14	1	52863365	349
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000050096	protein_coding	alternative1	19	1	53142756	4297
ENSMUSG00000074264	protein_coding	Amy1	ENSMUST00000142505	protein_coding		3	-1	113574272	963
ENSMUSG00000038206	protein_coding	Fbxo8	ENSMUST00000110322	protein_coding		8	1	56551090	1709
ENSMUSG00000116751	lincRNA	Gm49793	ENSMUST00000232564	lincRNA		17	-1	27318696	423
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000237832	protein_coding	alternative1	19	1	53142796	2985
ENSMUSG00000108662	transcribed_unprocessed_pseudogene	Olfr188-ps1	ENSMUST00000205766	processed_transcript		16	-1	59054202	4706
ENSMUSG00000108662	transcribed_unprocessed_pseudogene	Olfr188-ps1	ENSMUST00000220235	transcribed_unprocessed_pseudogene		16	-1	59051310	925
ENSMUSG00000074264	protein_coding	Amy1	ENSMUST00000174147	protein_coding		3	-1	113606699	1568
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000237430	protein_coding	principal3	19	1	53142974	4054
ENSMUSG00000026585	protein_coding	Kifap3	ENSMUST00000077642	protein_coding		1	1	163779583	4012
ENSMUSG00000074679	protein_coding	Defb28	ENSMUST00000121912	protein_coding	principal1	2	1	152518255	397
ENSMUSG00000061024	protein_coding	Rrs1	ENSMUST00000072079	protein_coding	principal1	1	1	9545408	2048
ENSMUSG00000056629	protein_coding	Fkbp2	ENSMUST00000070878	protein_coding	principal1	19	-1	6980440	642
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000237593	protein_coding		19	1	53143005	380
ENSMUSG00000106533	TR_V_pseudogene	Trav3d-2	ENSMUST00000199874	TR_V_pseudogene		14	1	52887587	334
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000235846	protein_coding	alternative1	19	1	53181596	2852
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000137513	retained_intron		2	1	28533549	4409
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000236296	protein_coding	principal3	19	1	53194953	4075
ENSMUSG00000026585	protein_coding	Kifap3	ENSMUST00000027877	protein_coding	principal1	1	1	163779583	3946
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000232285	lincRNA		17	1	27325035	1237
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000146217	retained_intron		2	1	28540726	708
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000232497	lincRNA		17	1	27325104	1472
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000232070	lincRNA		17	1	27325118	1424
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000232363	lincRNA		17	1	27325118	1415
ENSMUSG00000083014	processed_pseudogene	Gm11764	ENSMUST00000120221	processed_pseudogene		2	1	145892082	623
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231707	lincRNA		17	1	27325118	1628
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231262	lincRNA		17	1	27325118	1515
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000237099	protein_coding		19	1	53198004	817
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231770	lincRNA		17	1	27325118	1322
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231462	lincRNA		17	1	27325124	1591
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231336	lincRNA		17	1	27325146	1318
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000137215	nonsense_mediated_decay		2	1	28542333	785
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000237153	protein_coding		19	1	53198046	95
ENSMUSG00000020116	protein_coding	Pno1	ENSMUST00000020317	protein_coding	principal1	11	-1	17211568	1544
ENSMUSG00000094914	TR_V_gene	Trav9d-2	ENSMUST00000199746	TR_V_gene	principal5	14	1	52892186	340
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000128680	retained_intron		2	1	28545293	722
ENSMUSG00000025026	protein_coding	Add3	ENSMUST00000025999	protein_coding	principal3	19	1	53143997	4334
ENSMUSG00000092239	antisense	1700031A10Rik	ENSMUST00000174380	antisense		17	1	36923792	656
ENSMUSG00000056629	protein_coding	Fkbp2	ENSMUST00000177752	protein_coding	principal1	19	-1	6980501	664
ENSMUSG00000038206	protein_coding	Fbxo8	ENSMUST00000040218	protein_coding	principal1	8	1	56551090	3571
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000130281	retained_intron		2	1	28547550	582
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000232675	lincRNA		17	1	27325146	1777
ENSMUSG00000020116	protein_coding	Pno1	ENSMUST00000123754	processed_transcript		11	-1	17211054	503
ENSMUSG00000094914	TR_V_gene	Trav9d-2	ENSMUST00000178824	TR_V_gene	alternative2	14	1	52892186	337
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000232171	lincRNA		17	1	27325179	1934
ENSMUSG00000026821	protein_coding	Ralgds	ENSMUST00000140704	protein_coding		2	1	28549058	517
ENSMUSG00000097000	antisense	Gm17435	ENSMUST00000181452	antisense		8	1	72492934	2994
ENSMUSG00000097000	antisense	Gm17435	ENSMUST00000212699	antisense		8	1	72492944	1998
ENSMUSG00000021072	protein_coding	Tmx1	ENSMUST00000021471	protein_coding	principal1	12	1	70453095	2795
ENSMUSG00000110446	processed_pseudogene	Gm18646	ENSMUST00000212240	processed_pseudogene		8	1	72515358	1063
ENSMUSG00000038206	protein_coding	Fbxo8	ENSMUST00000210863	protein_coding		8	1	56551109	407
ENSMUSG00000094898	protein_coding	Vmn1r201	ENSMUST00000226330	protein_coding	principal1	13	1	22471923	4770
ENSMUSG00000094898	protein_coding	Vmn1r201	ENSMUST00000226965	protein_coding	principal1	13	1	22472016	4741
ENSMUSG00000038206	protein_coding	Fbxo8	ENSMUST00000211294	retained_intron		8	1	56587920	441
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000232347	retained_intron		17	1	27325192	1833
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231637	lincRNA		17	1	27325196	1135
ENSMUSG00000110318	processed_pseudogene	Gm2767	ENSMUST00000209582	processed_pseudogene		8	1	56560916	473
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000232125	lincRNA		17	1	27325206	1290
ENSMUSG00000094898	protein_coding	Vmn1r201	ENSMUST00000091730	protein_coding	principal1	13	1	22474618	903
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231456	lincRNA		17	1	27332177	2203
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231346	lincRNA		17	1	27335833	1927
ENSMUSG00000056629	protein_coding	Fkbp2	ENSMUST00000238181	protein_coding		19	-1	6980250	1526
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231613	lincRNA		17	1	27335872	1406
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231771	lincRNA		17	1	27335872	1433
ENSMUSG00000105672	unprocessed_pseudogene	Gm42816	ENSMUST00000198433	unprocessed_pseudogene		3	1	102830494	325
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231631	lincRNA		17	1	27335912	2218
ENSMUSG00000021072	protein_coding	Tmx1	ENSMUST00000162277	nonsense_mediated_decay		12	1	70456038	710
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000232337	lincRNA		17	1	27338160	1374
ENSMUSG00000056629	protein_coding	Fkbp2	ENSMUST00000237119	nonsense_mediated_decay		19	-1	6979865	881
ENSMUSG00000105938	processed_pseudogene	Gm33866	ENSMUST00000196911	processed_pseudogene		3	1	102880780	289
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231411	lincRNA		17	1	27340670	1694
ENSMUSG00000021072	protein_coding	Tmx1	ENSMUST00000160865	retained_intron		12	1	70459841	648
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000151398	lincRNA		17	1	27342449	1605
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231774	lincRNA		17	1	27342455	1888
ENSMUSG00000113944	lincRNA	Gm48847	ENSMUST00000222328	lincRNA		12	1	70478615	702
ENSMUSG00000106545	processed_pseudogene	Gm33952	ENSMUST00000197795	processed_pseudogene		3	1	102831590	408
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231649	lincRNA		17	1	27342455	1109
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000232349	lincRNA		17	1	27342456	1396
ENSMUSG00000073430	processed_transcript	Gm10505	ENSMUST00000231950	lincRNA		17	1	27342462	1687
ENSMUSG00000032038	protein_coding	St3gal4	ENSMUST00000034537	protein_coding	principal1	9	-1	35116873	2095
ENSMUSG00000045248	protein_coding	Med26	ENSMUST00000058534	protein_coding	principal1	8	-1	72548270	2997
ENSMUSG00000108565	unprocessed_pseudogene	Olfr189-ps1	ENSMUST00000205310	unprocessed_pseudogene		16	-1	59064411	804
ENSMUSG00000113302	lincRNA	Gm32219	ENSMUST00000221234	lincRNA		12	1	70522598	1819
ENSMUSG00000018820	protein_coding	Zfyve27	ENSMUST00000164455	retained_intron		19	1	42163951	636
ENSMUSG00000044249	protein_coding	Defb29	ENSMUST00000060598	protein_coding	principal1	2	-1	152540098	462
ENSMUSG00000085330	lincRNA	Gm13417	ENSMUST00000155475	lincRNA		2	-1	24566697	533
ENSMUSG00000110532	processed_pseudogene	Gm35857	ENSMUST00000212739	processed_pseudogene		8	1	72531031	178
ENSMUSG00000102591	TEC	Gm38383	ENSMUST00000194131	TEC		2	1	24588566	2660
ENSMUSG00000081717	unprocessed_pseudogene	Vmn1r-ps106	ENSMUST00000120587	unprocessed_pseudogene		13	1	22480631	824
ENSMUSG00000064006	protein_coding	Olfr190	ENSMUST00000215687	nonsense_mediated_decay		16	-1	59077961	7717
ENSMUSG00000093939	TR_V_gene	Trav4d-3	ENSMUST00000103592	TR_V_gene	principal1	14	1	52899969	331
ENSMUSG00000031478	protein_coding	Nek3	ENSMUST00000033865	protein_coding	principal3	8	-1	22166412	2021
ENSMUSG00000064006	protein_coding	Olfr190	ENSMUST00000216495	protein_coding	principal1	16	-1	59078005	8240
ENSMUSG00000064006	protein_coding	Olfr190	ENSMUST00000071243	protein_coding	principal1	16	-1	59075078	924
ENSMUSG00000031478	protein_coding	Nek3	ENSMUST00000110730	protein_coding	alternative2	8	-1	22166435	2050
ENSMUSG00000111767	lincRNA	4930546K05Rik	ENSMUST00000213343	lincRNA		9	-1	42209231	1302
ENSMUSG00000094539	protein_coding	Olfr191	ENSMUST00000215647	protein_coding	principal1	16	-1	59089822	3857
ENSMUSG00000111767	lincRNA	4930546K05Rik	ENSMUST00000216586	lincRNA		9	-1	42209231	3539
ENSMUSG00000031478	protein_coding	Nek3	ENSMUST00000151371	retained_intron		8	-1	22132302	614
ENSMUSG00000094539	protein_coding	Olfr191	ENSMUST00000078517	protein_coding	principal1	16	-1	59086481	930
ENSMUSG00000111767	lincRNA	4930546K05Rik	ENSMUST00000216643	lincRNA		9	-1	42209213	678
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000105323	protein_coding	principal1	10	-1	81350480	1463
ENSMUSG00000031478	protein_coding	Nek3	ENSMUST00000178324	protein_coding	alternative2	8	-1	22162494	1989
ENSMUSG00000094974	processed_pseudogene	Rps19-ps2	ENSMUST00000100614	processed_pseudogene		14	1	52902793	438
ENSMUSG00000014349	protein_coding	Ube2z	ENSMUST00000100528	protein_coding	principal1	11	-1	96065388	3997
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000112925	protein_coding	alternative1	6	1	115853470	4122
ENSMUSG00000084935	lincRNA	Gm14161	ENSMUST00000137020	lincRNA		2	-1	152553932	339
ENSMUSG00000108464	polymorphic_pseudogene	Olfr192	ENSMUST00000206214	polymorphic_pseudogene	principal1	16	-1	59099507	1054
ENSMUSG00000032038	protein_coding	St3gal4	ENSMUST00000213526	protein_coding		9	-1	35119183	792
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000124487	protein_coding		9	1	100597798	536
ENSMUSG00000104714	TR_V_pseudogene	Trav5d-2	ENSMUST00000196107	TR_V_pseudogene		14	1	52914428	275
ENSMUSG00000115406	TEC	Gm49300	ENSMUST00000227460	TEC		15	1	31368362	1944
ENSMUSG00000108464	polymorphic_pseudogene	Olfr192	ENSMUST00000205727	polymorphic_pseudogene	principal1	16	-1	59101853	1141
ENSMUSG00000032038	protein_coding	St3gal4	ENSMUST00000216557	protein_coding		9	-1	35106667	587
ENSMUSG00000012396	protein_coding	Nanog	ENSMUST00000112581	protein_coding	alternative2	6	1	122707489	1995
ENSMUSG00000108523	antisense	4933430L12Rik	ENSMUST00000206788	antisense		7	1	25219368	1194
ENSMUSG00000090485	protein_coding	Gm17416	ENSMUST00000238626	protein_coding	principal1	2	1	152562977	317
ENSMUSG00000117056	processed_pseudogene	Gm18270	ENSMUST00000233979	processed_pseudogene		17	1	21786856	1560
ENSMUSG00000032038	protein_coding	St3gal4	ENSMUST00000214526	protein_coding		9	-1	35099071	613
ENSMUSG00000012396	protein_coding	Nanog	ENSMUST00000112580	protein_coding	alternative2	6	1	122707565	2011
ENSMUSG00000090485	protein_coding	Gm17416	ENSMUST00000238204	processed_transcript		2	1	152563016	238
ENSMUSG00000082176	processed_pseudogene	Gm13163	ENSMUST00000119875	processed_pseudogene		4	-1	147195211	336
ENSMUSG00000090485	protein_coding	Gm17416	ENSMUST00000163724	protein_coding		2	1	152569338	201
ENSMUSG00000021368	protein_coding	Tbc1d7	ENSMUST00000220579	protein_coding		13	-1	43159308	433
ENSMUSG00000032038	protein_coding	St3gal4	ENSMUST00000215089	protein_coding		9	-1	35119268	588
ENSMUSG00000054499	protein_coding	Dedd2	ENSMUST00000206750	processed_transcript		7	-1	25219859	4594
ENSMUSG00000032038	protein_coding	St3gal4	ENSMUST00000217149	protein_coding		9	-1	35099116	482
ENSMUSG00000096129	TR_V_gene	Trav12d-2	ENSMUST00000197007	TR_V_gene	principal5	14	1	52915799	454
ENSMUSG00000032038	protein_coding	St3gal4	ENSMUST00000217542	protein_coding		9	-1	35072631	372
ENSMUSG00000032038	protein_coding	St3gal4	ENSMUST00000215638	protein_coding		9	-1	35076361	348
ENSMUSG00000096129	TR_V_gene	Trav12d-2	ENSMUST00000103593	TR_V_gene	alternative2	14	1	52915909	341
ENSMUSG00000032038	protein_coding	St3gal4	ENSMUST00000215463	protein_coding		9	-1	35055794	349
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000038234	protein_coding	principal3	6	1	115853530	4056
ENSMUSG00000012396	protein_coding	Nanog	ENSMUST00000012540	protein_coding	principal3	6	1	122707568	2211
ENSMUSG00000054499	protein_coding	Dedd2	ENSMUST00000205271	protein_coding	principal1	7	-1	25220615	1942
ENSMUSG00000098729	antisense	Gm27200	ENSMUST00000184626	antisense		4	1	155343683	657
ENSMUSG00000054499	protein_coding	Dedd2	ENSMUST00000206498	retained_intron		7	-1	25219871	1711
ENSMUSG00000054499	protein_coding	Dedd2	ENSMUST00000058702	protein_coding	principal1	7	-1	25219859	1828
ENSMUSG00000070315	processed_transcript	4930581F22Rik	ENSMUST00000093873	processed_transcript		9	1	35116728	2402
ENSMUSG00000035293	protein_coding	G2e3	ENSMUST00000054308	protein_coding	principal3	12	1	51348061	6803
ENSMUSG00000070315	processed_transcript	4930581F22Rik	ENSMUST00000214597	retained_intron		9	1	35116754	3557
ENSMUSG00000070315	processed_transcript	4930581F22Rik	ENSMUST00000159933	processed_transcript		9	1	35116767	501
ENSMUSG00000027195	protein_coding	Hsd17b12	ENSMUST00000145967	processed_transcript		2	-1	94066469	1330
ENSMUSG00000070315	processed_transcript	4930581F22Rik	ENSMUST00000162566	processed_transcript		9	1	35117414	631
ENSMUSG00000070315	processed_transcript	4930581F22Rik	ENSMUST00000161823	processed_transcript		9	1	35117981	639
ENSMUSG00000035293	protein_coding	G2e3	ENSMUST00000119211	protein_coding	alternative2	12	1	51348288	2926
ENSMUSG00000070315	processed_transcript	4930581F22Rik	ENSMUST00000159363	processed_transcript		9	1	35118065	750
ENSMUSG00000070315	processed_transcript	4930581F22Rik	ENSMUST00000161136	processed_transcript		9	1	35118195	834
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000122993	protein_coding		10	-1	81350191	1502
ENSMUSG00000035293	protein_coding	G2e3	ENSMUST00000121521	protein_coding	alternative2	12	1	51348372	2594
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000132313	retained_intron		10	-1	81350369	2501
ENSMUSG00000024738	protein_coding	Pga5	ENSMUST00000025647	protein_coding	principal1	19	-1	10678071	1417
ENSMUSG00000035293	protein_coding	G2e3	ENSMUST00000144767	retained_intron		12	1	51357149	616
ENSMUSG00000035293	protein_coding	G2e3	ENSMUST00000152236	retained_intron		12	1	51370675	2724
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000020454	protein_coding	principal1	10	-1	81350424	1621
ENSMUSG00000024738	protein_coding	Pga5	ENSMUST00000225135	processed_transcript		19	-1	10670973	206
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000207578	protein_coding		7	1	90302252	1490
ENSMUSG00000024738	protein_coding	Pga5	ENSMUST00000225016	retained_intron		19	-1	10676817	746
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000105324	protein_coding	principal1	10	-1	81350426	1540
ENSMUSG00000023873	protein_coding	1700010I14Rik	ENSMUST00000024650	protein_coding	alternative2	17	1	8988333	1769
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000134857	retained_intron		10	-1	81346730	597
ENSMUSG00000023873	protein_coding	1700010I14Rik	ENSMUST00000233654	nonsense_mediated_decay		17	1	8988342	1830
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000141171	protein_coding		10	-1	81349085	739
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000141305	nonsense_mediated_decay		6	1	115853580	4444
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000203243	retained_intron		6	1	115853588	2491
ENSMUSG00000032040	protein_coding	Dcps	ENSMUST00000034539	protein_coding	principal1	9	-1	35176061	1274
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000154609	protein_coding		10	-1	81350443	761
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000112923	protein_coding	alternative1	6	1	115853635	3765
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000140268	retained_intron		10	-1	81347922	546
ENSMUSG00000032040	protein_coding	Dcps	ENSMUST00000119847	protein_coding		9	-1	35176059	1445
ENSMUSG00000023873	protein_coding	1700010I14Rik	ENSMUST00000151609	protein_coding	principal3	17	1	8988357	1853
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000125889	processed_transcript		6	1	115853645	504
ENSMUSG00000032040	protein_coding	Dcps	ENSMUST00000155139	nonsense_mediated_decay		9	-1	35175993	426
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000148839	processed_transcript		10	-1	81350319	420
ENSMUSG00000023873	protein_coding	1700010I14Rik	ENSMUST00000232775	protein_coding	alternative2	17	1	8988361	1770
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000031029	protein_coding	principal1	5	1	31193227	2018
ENSMUSG00000026674	protein_coding	Ddr2	ENSMUST00000194690	protein_coding	principal1	1	-1	170110561	8590
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000149083	processed_transcript		6	1	115877267	777
ENSMUSG00000023873	protein_coding	1700010I14Rik	ENSMUST00000136954	protein_coding		17	1	8988383	1591
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000129482	retained_intron		10	-1	81350317	627
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000138113	processed_transcript		6	1	115885908	618
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000201679	protein_coding		5	1	31193242	362
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000140160	processed_transcript		10	-1	81350444	359
ENSMUSG00000026674	protein_coding	Ddr2	ENSMUST00000192312	protein_coding		1	-1	170110729	672
ENSMUSG00000047168	processed_pseudogene	Gm6684	ENSMUST00000053717	processed_pseudogene		19	-1	20586757	685
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000152092	retained_intron		6	1	115887140	338
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000146950	retained_intron		6	1	115893976	585
ENSMUSG00000026674	protein_coding	Ddr2	ENSMUST00000195867	retained_intron		1	-1	170110762	641
ENSMUSG00000026674	protein_coding	Ddr2	ENSMUST00000194619	processed_transcript		1	-1	170097328	442
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000124283	processed_transcript		6	1	115899110	2519
ENSMUSG00000054580	protein_coding	Pla2r1	ENSMUST00000112525	protein_coding	principal1	2	-1	60553308	7112
ENSMUSG00000031913	protein_coding	Vps4a	ENSMUST00000034388	protein_coding	principal1	8	1	107031222	2178
ENSMUSG00000024857	protein_coding	Cabp2	ENSMUST00000159148	protein_coding	alternative2	19	1	4082488	1030
ENSMUSG00000030323	protein_coding	Ift122	ENSMUST00000155565	retained_intron		6	1	115902627	4267
ENSMUSG00000026674	protein_coding	Ddr2	ENSMUST00000027985	protein_coding	principal1	1	-1	170110501	2928
ENSMUSG00000020232	protein_coding	Hmg20b	ENSMUST00000167481	protein_coding	principal1	10	-1	81350327	1321
ENSMUSG00000096911	lincRNA	Gm2165	ENSMUST00000153493	lincRNA		X	1	28666212	677
ENSMUSG00000096911	lincRNA	Gm2165	ENSMUST00000137981	lincRNA		X	1	28666235	764
ENSMUSG00000026674	protein_coding	Ddr2	ENSMUST00000170800	protein_coding	principal1	1	-1	170088944	8289
ENSMUSG00000096911	lincRNA	Gm2165	ENSMUST00000155337	lincRNA		X	1	28666150	397
ENSMUSG00000054580	protein_coding	Pla2r1	ENSMUST00000126327	processed_transcript		2	-1	60424307	642
ENSMUSG00000031913	protein_coding	Vps4a	ENSMUST00000144527	retained_intron		8	1	107039019	571
ENSMUSG00000085528	lincRNA	4930401O10Rik	ENSMUST00000128489	lincRNA		11	-1	71940122	787
ENSMUSG00000096911	lincRNA	Gm2165	ENSMUST00000129963	lincRNA		X	1	28666179	1846
ENSMUSG00000096911	lincRNA	Gm2165	ENSMUST00000124609	lincRNA		X	1	28666179	1118
ENSMUSG00000031913	protein_coding	Vps4a	ENSMUST00000132096	retained_intron		8	1	107042255	636
ENSMUSG00000086076	unprocessed_pseudogene	Ncr3-ps	ENSMUST00000134687	unprocessed_pseudogene		17	1	35180535	525
ENSMUSG00000054580	protein_coding	Pla2r1	ENSMUST00000136034	retained_intron		2	-1	60443424	481
ENSMUSG00000097503	antisense	3110045C21Rik	ENSMUST00000180638	antisense		1	1	169969409	1135
ENSMUSG00000078931	protein_coding	Pdf	ENSMUST00000154271	nonsense_mediated_decay		8	-1	107047186	773
ENSMUSG00000085895	processed_transcript	Gm12861	ENSMUST00000145395	processed_transcript		4	1	118971297	681
ENSMUSG00000082143	processed_pseudogene	Gm12864	ENSMUST00000122207	processed_pseudogene		4	1	118987014	1006
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000146312	protein_coding		9	1	100643448	1012
ENSMUSG00000097503	antisense	3110045C21Rik	ENSMUST00000193930	antisense		1	1	169969452	1046
ENSMUSG00000087238	lincRNA	Gm12865	ENSMUST00000137353	lincRNA		4	-1	118997198	326
ENSMUSG00000095089	unprocessed_pseudogene	Gm7408	ENSMUST00000178014	unprocessed_pseudogene		X	1	28779565	639
ENSMUSG00000087464	lincRNA	Gm12862	ENSMUST00000150754	lincRNA		4	-1	119000485	472
ENSMUSG00000053279	protein_coding	Aldh1a1	ENSMUST00000224807	processed_transcript		19	1	20492715	1085
ENSMUSG00000078931	protein_coding	Pdf	ENSMUST00000055316	protein_coding	principal1	8	-1	107048614	1306
ENSMUSG00000036323	protein_coding	Srp72	ENSMUST00000101087	protein_coding	principal2	5	1	76974683	3625
ENSMUSG00000066060	lincRNA	Gm12866	ENSMUST00000128998	lincRNA		4	-1	119069111	1671
ENSMUSG00000024857	protein_coding	Cabp2	ENSMUST00000159556	protein_coding	alternative2	19	1	4083490	781
ENSMUSG00000036323	protein_coding	Srp72	ENSMUST00000120550	protein_coding	alternative2	5	1	76974707	2297
ENSMUSG00000023249	protein_coding	Parp3	ENSMUST00000067218	protein_coding	principal3	9	-1	106476949	2962
ENSMUSG00000027544	protein_coding	Nfatc2	ENSMUST00000074618	protein_coding	principal3	2	-1	168590260	6637
ENSMUSG00000056544	protein_coding	Defb21	ENSMUST00000070722	protein_coding	principal1	2	1	152572744	427
ENSMUSG00000036323	protein_coding	Srp72	ENSMUST00000150661	retained_intron		5	1	76974721	660
ENSMUSG00000029863	protein_coding	Casp2	ENSMUST00000031895	protein_coding	principal1	6	1	42264985	3529
ENSMUSG00000054580	protein_coding	Pla2r1	ENSMUST00000128208	retained_intron		2	-1	60553308	3593
ENSMUSG00000027195	protein_coding	Hsd17b12	ENSMUST00000028619	protein_coding	principal1	2	-1	94157964	1902
ENSMUSG00000036323	protein_coding	Srp72	ENSMUST00000148423	retained_intron		5	1	76980579	528
ENSMUSG00000054580	protein_coding	Pla2r1	ENSMUST00000134583	retained_intron		2	-1	60455254	664
ENSMUSG00000024857	protein_coding	Cabp2	ENSMUST00000162908	protein_coding	principal3	19	1	4083519	911
ENSMUSG00000073412	protein_coding	Lst1	ENSMUST00000097336	protein_coding	principal1	17	-1	35188439	415
ENSMUSG00000054580	protein_coding	Pla2r1	ENSMUST00000150373	retained_intron		2	-1	60553308	1525
ENSMUSG00000106640	processed_pseudogene	Gm20940	ENSMUST00000197308	processed_pseudogene		3	-1	95964388	360
ENSMUSG00000023249	protein_coding	Parp3	ENSMUST00000123555	protein_coding	principal3	9	-1	106476376	2495
ENSMUSG00000024857	protein_coding	Cabp2	ENSMUST00000162584	processed_transcript		19	1	4086475	243
ENSMUSG00000095495	TR_V_gene	Trav9d-3	ENSMUST00000178252	TR_V_gene	principal1	14	1	52920443	575
ENSMUSG00000006010	protein_coding	Odr4	ENSMUST00000111913	protein_coding	principal3	1	-1	150393080	3273
ENSMUSG00000036323	protein_coding	Srp72	ENSMUST00000141873	retained_intron		5	1	76984095	1220
ENSMUSG00000086578	antisense	Gm13583	ENSMUST00000151931	antisense		2	1	60550757	1476
ENSMUSG00000027195	protein_coding	Hsd17b12	ENSMUST00000127084	processed_transcript		2	-1	94157909	1758
ENSMUSG00000103917	lincRNA	Gm38072	ENSMUST00000192127	lincRNA		Y	1	18199139	2162
ENSMUSG00000020656	protein_coding	Grhl1	ENSMUST00000085553	protein_coding	principal1	12	1	24572283	3469
ENSMUSG00000036323	protein_coding	Srp72	ENSMUST00000125732	retained_intron		5	1	76993993	417
ENSMUSG00000086578	antisense	Gm13583	ENSMUST00000126361	antisense		2	1	60552355	819
ENSMUSG00000086578	antisense	Gm13583	ENSMUST00000168789	antisense		2	1	60550759	123
ENSMUSG00000027195	protein_coding	Hsd17b12	ENSMUST00000146580	processed_transcript		2	-1	94066764	668
ENSMUSG00000109696	lincRNA	Gm36670	ENSMUST00000210400	lincRNA		8	-1	91991869	1405
ENSMUSG00000109696	lincRNA	Gm36670	ENSMUST00000210361	lincRNA		8	-1	91991947	775
ENSMUSG00000104439	unprocessed_pseudogene	Gm20851	ENSMUST00000193038	unprocessed_pseudogene		Y	1	18208481	696
ENSMUSG00000027195	protein_coding	Hsd17b12	ENSMUST00000141955	processed_transcript		2	-1	94157893	727
ENSMUSG00000110274	lincRNA	Gm36843	ENSMUST00000209303	lincRNA		8	1	91997594	627
ENSMUSG00000036323	protein_coding	Srp72	ENSMUST00000146167	retained_intron		5	1	76995257	764
ENSMUSG00000104446	unprocessed_pseudogene	Gm30312	ENSMUST00000194516	unprocessed_pseudogene		Y	1	18245623	696
ENSMUSG00000103514	unprocessed_pseudogene	Gm37433	ENSMUST00000192695	unprocessed_pseudogene		Y	1	18282548	678
ENSMUSG00000029863	protein_coding	Casp2	ENSMUST00000139930	retained_intron		6	1	42265056	3325
ENSMUSG00000102150	lincRNA	Gm37473	ENSMUST00000195079	lincRNA		Y	1	18283695	674
ENSMUSG00000036323	protein_coding	Srp72	ENSMUST00000132860	retained_intron		5	1	76996974	2355
ENSMUSG00000018263	protein_coding	Tbx5	ENSMUST00000202723	protein_coding		5	1	119832668	657
ENSMUSG00000006010	protein_coding	Odr4	ENSMUST00000097547	protein_coding	alternative2	1	-1	150392762	2851
ENSMUSG00000103782	lincRNA	Gm37656	ENSMUST00000192673	lincRNA		Y	-1	18295111	397
ENSMUSG00000105801	TEC	C430019N01Rik	ENSMUST00000199517	TEC		5	-1	98000950	1567
ENSMUSG00000006010	protein_coding	Odr4	ENSMUST00000006167	protein_coding	alternative2	1	-1	150392719	1716
ENSMUSG00000050645	protein_coding	Defb19	ENSMUST00000053180	protein_coding	principal1	2	-1	152580312	394
ENSMUSG00000036323	protein_coding	Srp72	ENSMUST00000144741	retained_intron		5	1	76997405	410
ENSMUSG00000006010	protein_coding	Odr4	ENSMUST00000094477	nonsense_mediated_decay		1	-1	150392743	1809
ENSMUSG00000029863	protein_coding	Casp2	ENSMUST00000156829	nonsense_mediated_decay		6	1	42265120	1439
ENSMUSG00000104050	lincRNA	Gm38127	ENSMUST00000191978	lincRNA		Y	1	18321027	468
ENSMUSG00000021368	protein_coding	Tbc1d7	ENSMUST00000179852	protein_coding	principal1	13	-1	43171484	1246
ENSMUSG00000102264	unprocessed_pseudogene	Gm30638	ENSMUST00000195570	unprocessed_pseudogene		Y	1	18496225	656
ENSMUSG00000029863	protein_coding	Casp2	ENSMUST00000132246	processed_transcript		6	1	42267391	396
ENSMUSG00000118649	unprocessed_pseudogene	AL845162.1	ENSMUST00000239414	unprocessed_pseudogene		2	-1	152578952	126
ENSMUSG00000020656	protein_coding	Grhl1	ENSMUST00000221426	processed_transcript		12	1	24572287	3267
ENSMUSG00000029863	protein_coding	Casp2	ENSMUST00000141669	retained_intron		6	1	42268010	615
ENSMUSG00000105887	TR_V_pseudogene	Trav5d-3	ENSMUST00000170041	TR_V_pseudogene		14	1	52928332	270
ENSMUSG00000021368	protein_coding	Tbc1d7	ENSMUST00000220787	protein_coding		13	-1	43171348	892
ENSMUSG00000029863	protein_coding	Casp2	ENSMUST00000144821	processed_transcript		6	1	42269285	384
ENSMUSG00000023249	protein_coding	Parp3	ENSMUST00000145396	retained_intron		9	-1	106476169	2246
ENSMUSG00000021368	protein_coding	Tbc1d7	ENSMUST00000223000	protein_coding		13	-1	43165293	876
ENSMUSG00000027544	protein_coding	Nfatc2	ENSMUST00000109184	protein_coding	alternative2	2	-1	168590365	6828
ENSMUSG00000029863	protein_coding	Casp2	ENSMUST00000132398	retained_intron		6	1	42276487	808
ENSMUSG00000069743	protein_coding	Zfp820	ENSMUST00000084141	protein_coding	principal2	17	-1	21845759	3686
ENSMUSG00000020656	protein_coding	Grhl1	ENSMUST00000223442	processed_transcript		12	1	24580719	3100
ENSMUSG00000029863	protein_coding	Casp2	ENSMUST00000152893	processed_transcript		6	1	42279637	545
ENSMUSG00000006010	protein_coding	Odr4	ENSMUST00000132809	retained_intron		1	-1	150382474	580
ENSMUSG00000021368	protein_coding	Tbc1d7	ENSMUST00000223076	retained_intron		13	-1	43159552	564
ENSMUSG00000021262	protein_coding	Evl	ENSMUST00000077735	protein_coding		12	1	108554720	2121
ENSMUSG00000086900	antisense	Kcnab3os	ENSMUST00000136196	antisense		11	-1	69332122	566
ENSMUSG00000030521	protein_coding	Mphosph10	ENSMUST00000032735	protein_coding	principal1	7	-1	64392268	2248
ENSMUSG00000029863	protein_coding	Casp2	ENSMUST00000141727	processed_transcript		6	1	42279781	704
ENSMUSG00000023249	protein_coding	Parp3	ENSMUST00000112479	protein_coding	alternative2	9	-1	106476669	2030
ENSMUSG00000021368	protein_coding	Tbc1d7	ENSMUST00000222160	protein_coding		13	-1	43171483	917
ENSMUSG00000020656	protein_coding	Grhl1	ENSMUST00000020985	protein_coding		12	1	24580749	3070
ENSMUSG00000069743	protein_coding	Zfp820	ENSMUST00000232918	protein_coding	alternative2	17	-1	21845772	2735
ENSMUSG00000029863	protein_coding	Casp2	ENSMUST00000203089	processed_transcript		6	1	42279807	494
ENSMUSG00000036636	protein_coding	Clcn7	ENSMUST00000162862	protein_coding		17	1	25133391	4237
ENSMUSG00000031916	protein_coding	Cog8	ENSMUST00000095517	protein_coding	principal1	8	-1	107056689	4476
ENSMUSG00000021368	protein_coding	Tbc1d7	ENSMUST00000221352	nonsense_mediated_decay		13	-1	43171388	740
ENSMUSG00000080697	unprocessed_pseudogene	Vmn1r-ps107	ENSMUST00000121458	unprocessed_pseudogene		13	1	22491605	581
ENSMUSG00000030521	protein_coding	Mphosph10	ENSMUST00000206047	retained_intron		7	-1	64384519	695
ENSMUSG00000023249	protein_coding	Parp3	ENSMUST00000139362	retained_intron		9	-1	106472018	667
ENSMUSG00000023249	protein_coding	Parp3	ENSMUST00000214682	protein_coding		9	-1	106476610	1180
ENSMUSG00000081495	unprocessed_pseudogene	Vmn1r-ps108	ENSMUST00000117059	unprocessed_pseudogene		13	1	22496034	365
ENSMUSG00000030521	protein_coding	Mphosph10	ENSMUST00000205516	retained_intron		7	-1	64392236	2276
ENSMUSG00000087207	transcribed_unprocessed_pseudogene	Gm13147	ENSMUST00000125785	processed_transcript		4	1	147230284	585
ENSMUSG00000023249	protein_coding	Parp3	ENSMUST00000156426	protein_coding		9	-1	106476104	636
ENSMUSG00000024399	protein_coding	Ltb	ENSMUST00000025262	protein_coding	principal2	17	1	35194439	1160
ENSMUSG00000062124	protein_coding	Defb45	ENSMUST00000109834	protein_coding	principal1	2	-1	152596482	385
ENSMUSG00000087207	transcribed_unprocessed_pseudogene	Gm13147	ENSMUST00000177526	transcribed_unprocessed_pseudogene		4	1	147253297	1173
ENSMUSG00000021368	protein_coding	Tbc1d7	ENSMUST00000221795	nonsense_mediated_decay		13	-1	43171479	986
ENSMUSG00000094379	protein_coding	Vmn1r202	ENSMUST00000228020	protein_coding	principal1	13	-1	22505381	5441
ENSMUSG00000023249	protein_coding	Parp3	ENSMUST00000140029	retained_intron		9	-1	106476596	654
ENSMUSG00000031916	protein_coding	Cog8	ENSMUST00000034391	protein_coding	principal1	8	-1	107056684	2954
ENSMUSG00000094379	protein_coding	Vmn1r202	ENSMUST00000078642	protein_coding	principal1	13	-1	22502245	909
ENSMUSG00000021368	protein_coding	Tbc1d7	ENSMUST00000221095	retained_intron		13	-1	43171470	2624
ENSMUSG00000024399	protein_coding	Ltb	ENSMUST00000173510	retained_intron		17	1	35194523	1417
ENSMUSG00000023249	protein_coding	Parp3	ENSMUST00000125850	protein_coding		9	-1	106476395	591
ENSMUSG00000024399	protein_coding	Ltb	ENSMUST00000173600	protein_coding	alternative2	17	1	35194626	905
ENSMUSG00000031916	protein_coding	Cog8	ENSMUST00000122903	retained_intron		8	-1	107054257	599
ENSMUSG00000027544	protein_coding	Nfatc2	ENSMUST00000151292	processed_transcript		2	-1	168552276	5399
ENSMUSG00000006010	protein_coding	Odr4	ENSMUST00000148389	processed_transcript		1	-1	150392937	1102
ENSMUSG00000069289	protein_coding	Vmn1r203	ENSMUST00000227520	protein_coding	principal1	13	1	22518114	8227
ENSMUSG00000062124	protein_coding	Defb45	ENSMUST00000131096	processed_transcript		2	-1	152599399	447
ENSMUSG00000021368	protein_coding	Tbc1d7	ENSMUST00000021797	protein_coding	principal1	13	-1	43171501	1239
ENSMUSG00000084962	processed_transcript	Gm11947	ENSMUST00000125275	processed_transcript		11	1	3534238	273
ENSMUSG00000031916	protein_coding	Cog8	ENSMUST00000134772	nonsense_mediated_decay		8	-1	107056498	712
ENSMUSG00000069289	protein_coding	Vmn1r203	ENSMUST00000228889	protein_coding	principal1	13	1	22518114	8213
ENSMUSG00000083734	processed_pseudogene	Gm16209	ENSMUST00000118457	processed_pseudogene		8	-1	107038106	627
ENSMUSG00000018263	protein_coding	Tbx5	ENSMUST00000018407	protein_coding	principal1	5	1	119834663	3942
ENSMUSG00000006010	protein_coding	Odr4	ENSMUST00000150615	retained_intron		1	-1	150392748	665
ENSMUSG00000094607	TR_V_gene	Trav12d-3	ENSMUST00000177703	TR_V_gene	principal1	14	1	52929789	347
ENSMUSG00000046541	protein_coding	Zfp526	ENSMUST00000055604	protein_coding	principal1	7	1	25221425	3380
ENSMUSG00000069289	protein_coding	Vmn1r203	ENSMUST00000091729	protein_coding	principal1	13	1	22524051	936
ENSMUSG00000006010	protein_coding	Odr4	ENSMUST00000140112	retained_intron		1	-1	150392747	826
ENSMUSG00000053279	protein_coding	Aldh1a1	ENSMUST00000225337	protein_coding	principal1	19	1	20492715	2358
ENSMUSG00000021262	protein_coding	Evl	ENSMUST00000021689	protein_coding	principal4	12	1	108554724	2180
ENSMUSG00000087291	processed_transcript	Gm11946	ENSMUST00000128806	processed_transcript		11	1	3530157	706
ENSMUSG00000036636	protein_coding	Clcn7	ENSMUST00000040729	protein_coding	principal3	17	1	25133391	4071
ENSMUSG00000006010	protein_coding	Odr4	ENSMUST00000097546	protein_coding	alternative2	1	-1	150393055	3174
ENSMUSG00000027544	protein_coding	Nfatc2	ENSMUST00000099067	processed_transcript		2	-1	168601632	2727
ENSMUSG00000018263	protein_coding	Tbx5	ENSMUST00000202504	protein_coding		5	1	119836155	1170
ENSMUSG00000087688	antisense	Gm11300	ENSMUST00000137651	antisense		13	-1	22524744	565
ENSMUSG00000087291	processed_transcript	Gm11946	ENSMUST00000123459	processed_transcript		11	1	3530948	3941
ENSMUSG00000114772	lincRNA	2210404E10Rik	ENSMUST00000225930	lincRNA		19	1	10684793	585
ENSMUSG00000053279	protein_coding	Aldh1a1	ENSMUST00000224358	processed_transcript		19	1	20492732	1800
ENSMUSG00000084241	processed_pseudogene	Gm13416	ENSMUST00000117264	processed_pseudogene		2	-1	24594513	1612
ENSMUSG00000053279	protein_coding	Aldh1a1	ENSMUST00000225313	protein_coding		19	1	20492759	825
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000160964	protein_coding		8	1	95676980	1029
ENSMUSG00000053279	protein_coding	Aldh1a1	ENSMUST00000225249	processed_transcript		19	1	20492760	510
ENSMUSG00000097264	processed_pseudogene	Rpl31-ps24	ENSMUST00000181350	processed_pseudogene		1	1	64934402	379
ENSMUSG00000046207	protein_coding	Pik3r6	ENSMUST00000102613	protein_coding	principal3	11	1	68503019	3225
ENSMUSG00000053279	protein_coding	Aldh1a1	ENSMUST00000087638	protein_coding	principal1	19	1	20601961	2053
ENSMUSG00000018820	protein_coding	Zfyve27	ENSMUST00000169536	protein_coding	principal3	19	1	42170567	5611
ENSMUSG00000023046	protein_coding	Igfbp6	ENSMUST00000023807	protein_coding	principal1	15	1	102144362	1112
ENSMUSG00000021262	protein_coding	Evl	ENSMUST00000109854	protein_coding	alternative1	12	1	108605766	1870
ENSMUSG00000036636	protein_coding	Clcn7	ENSMUST00000233633	nonsense_mediated_decay		17	1	25133391	4067
ENSMUSG00000027544	protein_coding	Nfatc2	ENSMUST00000029057	protein_coding		2	-1	168590191	2310
ENSMUSG00000018820	protein_coding	Zfyve27	ENSMUST00000099443	protein_coding	alternative2	19	1	42170594	2573
ENSMUSG00000036636	protein_coding	Clcn7	ENSMUST00000162722	retained_intron		17	1	25133465	584
ENSMUSG00000024580	protein_coding	Grpel2	ENSMUST00000062991	protein_coding	principal1	18	-1	61726323	4038
ENSMUSG00000027544	protein_coding	Nfatc2	ENSMUST00000137451	protein_coding		2	-1	168601657	2369
ENSMUSG00000036636	protein_coding	Clcn7	ENSMUST00000160961	protein_coding	alternative2	17	1	25136622	3983
ENSMUSG00000046207	protein_coding	Pik3r6	ENSMUST00000153671	processed_transcript		11	1	68503091	3214
ENSMUSG00000021262	protein_coding	Evl	ENSMUST00000223109	protein_coding		12	1	108635710	1487
ENSMUSG00000018820	protein_coding	Zfyve27	ENSMUST00000166788	retained_intron		19	1	42170700	1747
ENSMUSG00000036636	protein_coding	Clcn7	ENSMUST00000159773	protein_coding		17	1	25145809	605
ENSMUSG00000046207	protein_coding	Pik3r6	ENSMUST00000126069	processed_transcript		11	1	68536200	633
ENSMUSG00000095887	protein_coding	Gm10096	ENSMUST00000180207	protein_coding	principal1	X	-1	28954702	907
ENSMUSG00000024580	protein_coding	Grpel2	ENSMUST00000238010	protein_coding		18	-1	61726325	3960
ENSMUSG00000018820	protein_coding	Zfyve27	ENSMUST00000168130	protein_coding		19	1	42178823	684
ENSMUSG00000027544	protein_coding	Nfatc2	ENSMUST00000140137	retained_intron		2	-1	168590331	3309
ENSMUSG00000036636	protein_coding	Clcn7	ENSMUST00000159426	retained_intron		17	1	25158655	1006
ENSMUSG00000024580	protein_coding	Grpel2	ENSMUST00000237466	processed_transcript		18	-1	61719222	492
ENSMUSG00000021262	protein_coding	Evl	ENSMUST00000172409	protein_coding		12	1	108635753	1955
ENSMUSG00000046207	protein_coding	Pik3r6	ENSMUST00000131669	processed_transcript		11	1	68552064	440
ENSMUSG00000018820	protein_coding	Zfyve27	ENSMUST00000165783	retained_intron		19	1	42183485	791
ENSMUSG00000095887	protein_coding	Gm10096	ENSMUST00000178672	protein_coding	principal1	X	-1	28953081	639
ENSMUSG00000027544	protein_coding	Nfatc2	ENSMUST00000138546	retained_intron		2	-1	168590365	2174
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000235940	lincRNA		19	1	20324856	1674
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000235137	lincRNA		19	1	20324856	1212
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000236064	lincRNA		19	1	20324873	1385
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000235141	lincRNA		19	1	20324885	1438
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000236291	lincRNA		19	1	20324889	1099
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000238187	lincRNA		19	1	20405286	751
ENSMUSG00000046207	protein_coding	Pik3r6	ENSMUST00000060441	protein_coding	alternative2	11	1	68503019	3237
ENSMUSG00000031376	protein_coding	Atp2b3	ENSMUST00000033744	protein_coding		X	1	73503086	3894
ENSMUSG00000074783	lincRNA	AU019990	ENSMUST00000143964	lincRNA		2	1	132598195	1614
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000179640	lincRNA		19	1	20405288	780
ENSMUSG00000018820	protein_coding	Zfyve27	ENSMUST00000164460	retained_intron		19	1	42185335	876
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000235888	lincRNA		19	1	20405304	652
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000235283	lincRNA		19	1	20405311	778
ENSMUSG00000074783	lincRNA	AU019990	ENSMUST00000153028	lincRNA		2	1	132598195	888
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000237528	lincRNA		19	1	20411270	1026
ENSMUSG00000074783	lincRNA	AU019990	ENSMUST00000138751	lincRNA		2	1	132645881	481
ENSMUSG00000021262	protein_coding	Evl	ENSMUST00000222048	retained_intron		12	1	108676103	765
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000236428	lincRNA		19	1	20417194	977
ENSMUSG00000018820	protein_coding	Zfyve27	ENSMUST00000170184	retained_intron		19	1	42185609	818
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000236065	lincRNA		19	1	20417194	1476
ENSMUSG00000021262	protein_coding	Evl	ENSMUST00000223548	protein_coding		12	1	108686097	569
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000235376	lincRNA		19	1	20417205	1462
ENSMUSG00000081445	processed_pseudogene	Rpl23a-ps4	ENSMUST00000121008	processed_pseudogene		2	1	132662242	455
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000237182	lincRNA		19	1	20417205	1157
ENSMUSG00000031376	protein_coding	Atp2b3	ENSMUST00000088429	protein_coding	principal2	X	1	73503086	4483
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000235526	lincRNA		19	1	20417213	1223
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000238058	lincRNA		19	1	20417231	1360
ENSMUSG00000021263	protein_coding	Degs2	ENSMUST00000222255	protein_coding		12	-1	108692183	737
ENSMUSG00000094732	lincRNA	1500015L24Rik	ENSMUST00000179010	lincRNA		19	1	20422365	292
ENSMUSG00000114469	processed_transcript	C730002L08Rik	ENSMUST00000237647	lincRNA		19	-1	20424782	1517
ENSMUSG00000114469	processed_transcript	C730002L08Rik	ENSMUST00000235626	lincRNA		19	-1	20538950	987
ENSMUSG00000031376	protein_coding	Atp2b3	ENSMUST00000114479	protein_coding	alternative1	X	1	73503086	4637
ENSMUSG00000114469	processed_transcript	C730002L08Rik	ENSMUST00000236998	lincRNA		19	-1	20540288	1211
ENSMUSG00000049100	protein_coding	Pcdh10	ENSMUST00000193252	protein_coding		3	1	45378398	4638
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000102935	protein_coding	principal3	2	-1	24935163	1574
ENSMUSG00000114469	processed_transcript	C730002L08Rik	ENSMUST00000225910	antisense		19	-1	20552330	2917
ENSMUSG00000020537	protein_coding	Drg2	ENSMUST00000138713	retained_intron		11	1	60454591	969
ENSMUSG00000045684	protein_coding	Lcn6	ENSMUST00000114199	protein_coding	principal1	2	1	25676786	729
ENSMUSG00000045684	protein_coding	Lcn6	ENSMUST00000059693	protein_coding		2	1	25679266	1254
ENSMUSG00000066151	protein_coding	Fkbp15	ENSMUST00000139308	processed_transcript		4	-1	62332294	3279
ENSMUSG00000032018	protein_coding	Sc5d	ENSMUST00000052725	protein_coding	principal1	9	-1	42264256	4787
ENSMUSG00000080237	processed_pseudogene	Gm14239	ENSMUST00000116491	processed_pseudogene		2	-1	155460892	685
ENSMUSG00000045684	protein_coding	Lcn6	ENSMUST00000114197	protein_coding		2	1	25679961	635
ENSMUSG00000027544	protein_coding	Nfatc2	ENSMUST00000171689	protein_coding		2	-1	168601655	2742
ENSMUSG00000032018	protein_coding	Sc5d	ENSMUST00000217513	protein_coding		9	-1	42264255	703
ENSMUSG00000045684	protein_coding	Lcn6	ENSMUST00000139441	processed_transcript		2	1	25680113	504
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000045586	protein_coding		5	-1	45857615	5708
ENSMUSG00000032018	protein_coding	Sc5d	ENSMUST00000169609	protein_coding	principal1	9	-1	42264200	1677
ENSMUSG00000027855	protein_coding	Sycp1	ENSMUST00000029448	protein_coding	principal1	3	-1	102936100	3437
ENSMUSG00000051344	protein_coding	Plekhm3	ENSMUST00000139649	nonsense_mediated_decay		1	-1	64956824	4236
ENSMUSG00000021263	protein_coding	Degs2	ENSMUST00000167978	protein_coding		12	-1	108702297	1729
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000028349	protein_coding	alternative2	2	-1	24935252	1666
ENSMUSG00000027855	protein_coding	Sycp1	ENSMUST00000198651	processed_transcript		3	-1	102833883	608
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000238522	protein_coding	principal1	5	-1	45857615	10477
ENSMUSG00000089684	processed_pseudogene	Gm14163	ENSMUST00000117342	processed_pseudogene		2	1	152609174	217
ENSMUSG00000027855	protein_coding	Sycp1	ENSMUST00000196988	protein_coding	principal1	3	-1	102936100	3189
ENSMUSG00000116220	antisense	A430088P11Rik	ENSMUST00000230612	antisense		15	-1	80697610	4356
ENSMUSG00000018470	protein_coding	Kcnab3	ENSMUST00000018614	protein_coding	principal1	11	1	69326258	2538
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000190036	protein_coding		5	-1	45857467	5463
ENSMUSG00000027855	protein_coding	Sycp1	ENSMUST00000199930	protein_coding		3	-1	102936090	665
ENSMUSG00000116220	antisense	A430088P11Rik	ENSMUST00000230325	antisense		15	-1	80697602	901
ENSMUSG00000021263	protein_coding	Degs2	ENSMUST00000021691	protein_coding	principal1	12	-1	108702315	1287
ENSMUSG00000044863	protein_coding	Defb36	ENSMUST00000058086	protein_coding	principal1	2	1	152604327	468
ENSMUSG00000082203	processed_pseudogene	Gm15636	ENSMUST00000119205	processed_pseudogene		12	-1	108441270	668
ENSMUSG00000051344	protein_coding	Plekhm3	ENSMUST00000097713	protein_coding	principal1	1	-1	64956824	8562
ENSMUSG00000030630	protein_coding	Fah	ENSMUST00000032865	protein_coding	principal1	7	-1	84605942	1585
ENSMUSG00000051344	protein_coding	Plekhm3	ENSMUST00000187188	processed_transcript		1	-1	64836764	1659
ENSMUSG00000030630	protein_coding	Fah	ENSMUST00000128460	protein_coding		7	-1	84606722	727
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000155953	retained_intron		2	-1	24935145	1590
ENSMUSG00000051344	protein_coding	Plekhm3	ENSMUST00000140857	retained_intron		1	-1	64928097	2291
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000208720	non_stop_decay		7	1	90348698	1681
ENSMUSG00000074678	protein_coding	Defb25	ENSMUST00000099203	protein_coding	principal1	2	-1	152623053	293
ENSMUSG00000032116	protein_coding	Stt3a	ENSMUST00000120381	protein_coding	principal1	9	-1	36767679	5867
ENSMUSG00000022408	protein_coding	Fam83f	ENSMUST00000023044	protein_coding	principal1	15	1	80671847	2993
ENSMUSG00000058070	protein_coding	Eml1	ENSMUST00000138456	retained_intron		12	1	108370957	2984
ENSMUSG00000019845	protein_coding	Tube1	ENSMUST00000213237	retained_intron		10	1	39133976	695
ENSMUSG00000051344	protein_coding	Plekhm3	ENSMUST00000123225	protein_coding		1	-1	64956775	680
ENSMUSG00000030630	protein_coding	Fah	ENSMUST00000209112	processed_transcript		7	-1	84605904	682
ENSMUSG00000030630	protein_coding	Fah	ENSMUST00000153126	processed_transcript		7	-1	84602100	145
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000144963	nonsense_mediated_decay		2	-1	24935167	903
ENSMUSG00000032116	protein_coding	Stt3a	ENSMUST00000135934	protein_coding		9	-1	36754867	681
ENSMUSG00000018470	protein_coding	Kcnab3	ENSMUST00000142328	retained_intron		11	1	69327866	2126
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000129784	retained_intron		2	-1	24935145	974
ENSMUSG00000094758	TR_V_gene	Trav13d-2	ENSMUST00000197954	TR_V_gene		14	1	52942764	331
ENSMUSG00000030630	protein_coding	Fah	ENSMUST00000134390	retained_intron		7	-1	84605729	658
ENSMUSG00000094758	TR_V_gene	Trav13d-2	ENSMUST00000103596	TR_V_gene	principal1	14	1	52943019	264
ENSMUSG00000051344	protein_coding	Plekhm3	ENSMUST00000134097	processed_transcript		1	-1	64956727	658
ENSMUSG00000018470	protein_coding	Kcnab3	ENSMUST00000134561	retained_intron		11	1	69330324	750
ENSMUSG00000111074	lincRNA	Gm36435	ENSMUST00000213341	lincRNA		9	-1	42279878	1178
ENSMUSG00000023045	protein_coding	Soat2	ENSMUST00000023806	protein_coding	principal1	15	1	102150526	2208
ENSMUSG00000107084	lincRNA	Gm43269	ENSMUST00000202075	lincRNA		5	1	119914938	518
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000142887	nonsense_mediated_decay		2	-1	24935142	902
ENSMUSG00000022545	protein_coding	Ercc4	ENSMUST00000023206	protein_coding	principal1	16	1	13109684	3480
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000152240	retained_intron		2	-1	24927200	775
ENSMUSG00000107063	lincRNA	Gm38554	ENSMUST00000201639	lincRNA		5	1	119959243	708
ENSMUSG00000095560	TR_V_gene	Trav14d-2	ENSMUST00000196802	TR_V_gene		14	1	52948568	464
ENSMUSG00000095560	TR_V_gene	Trav14d-2	ENSMUST00000103597	TR_V_gene	principal1	14	1	52948890	276
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000133934	protein_coding		2	-1	24935174	662
ENSMUSG00000015745	protein_coding	Plekho1	ENSMUST00000015889	protein_coding	principal1	3	-1	95996001	1931
ENSMUSG00000023045	protein_coding	Soat2	ENSMUST00000160465	nonsense_mediated_decay		15	1	102151116	1628
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000155525	retained_intron		2	-1	24927903	437
ENSMUSG00000032116	protein_coding	Stt3a	ENSMUST00000215998	processed_transcript		9	-1	36767599	858
ENSMUSG00000022545	protein_coding	Ercc4	ENSMUST00000138527	retained_intron		16	1	13109917	1118
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000121573	protein_coding		5	-1	45856553	2378
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000132074	protein_coding		2	-1	24935054	253
ENSMUSG00000043811	protein_coding	Rtn4r	ENSMUST00000059589	protein_coding	principal1	16	1	18127642	1938
ENSMUSG00000032116	protein_coding	Stt3a	ENSMUST00000128270	nonsense_mediated_decay		9	-1	36767619	602
ENSMUSG00000015745	protein_coding	Plekho1	ENSMUST00000123006	protein_coding		3	-1	95995668	1208
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000200142	retained_intron		5	-1	45727578	7912
ENSMUSG00000032116	protein_coding	Stt3a	ENSMUST00000217599	protein_coding		9	-1	36767609	285
ENSMUSG00000022545	protein_coding	Ercc4	ENSMUST00000141024	nonsense_mediated_decay		16	1	13109935	1455
ENSMUSG00000015745	protein_coding	Plekho1	ENSMUST00000130043	protein_coding		3	-1	95995722	788
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000156706	processed_transcript		2	-1	24928131	338
ENSMUSG00000029338	protein_coding	Antxr2	ENSMUST00000031281	protein_coding	principal2	5	-1	98030962	5656
ENSMUSG00000083816	processed_pseudogene	Gm13033	ENSMUST00000117591	processed_pseudogene		4	1	132884763	1057
ENSMUSG00000032116	protein_coding	Stt3a	ENSMUST00000143881	retained_intron		9	-1	36759783	669
ENSMUSG00000022545	protein_coding	Ercc4	ENSMUST00000129049	nonsense_mediated_decay		16	1	13111794	5130
ENSMUSG00000091455	protein_coding	Otogl	ENSMUST00000165341	protein_coding	principal1	10	-1	107912134	8763
ENSMUSG00000032116	protein_coding	Stt3a	ENSMUST00000133060	protein_coding		9	-1	36767350	598
ENSMUSG00000026972	protein_coding	Arrdc1	ENSMUST00000133396	retained_intron		2	-1	24935188	717
ENSMUSG00000066383	protein_coding	Iqcf1	ENSMUST00000164965	protein_coding	alternative2	9	1	106499967	523
ENSMUSG00000015745	protein_coding	Plekho1	ENSMUST00000143485	protein_coding		3	-1	95995866	441
ENSMUSG00000084412	processed_pseudogene	Gm12044	ENSMUST00000120335	processed_pseudogene		11	-1	21451354	213
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000087164	protein_coding		5	-1	45856551	4979
ENSMUSG00000029338	protein_coding	Antxr2	ENSMUST00000199088	protein_coding	alternative2	5	-1	98031043	2739
ENSMUSG00000022545	protein_coding	Ercc4	ENSMUST00000156393	processed_transcript		16	1	13132391	651
ENSMUSG00000082607	processed_pseudogene	Gm12045	ENSMUST00000122122	processed_pseudogene		11	1	21491314	573
ENSMUSG00000015745	protein_coding	Plekho1	ENSMUST00000157043	retained_intron		3	-1	95995798	362
ENSMUSG00000032116	protein_coding	Stt3a	ENSMUST00000138358	retained_intron		9	-1	36767574	891
ENSMUSG00000082040	processed_pseudogene	Gm12046	ENSMUST00000118536	processed_pseudogene		11	-1	21493955	331
ENSMUSG00000029338	protein_coding	Antxr2	ENSMUST00000202736	processed_transcript		5	-1	97996095	545
ENSMUSG00000032116	protein_coding	Stt3a	ENSMUST00000137994	retained_intron		9	-1	36767633	2386
ENSMUSG00000033429	protein_coding	Mcee	ENSMUST00000206138	processed_transcript		7	1	64392607	327
ENSMUSG00000020537	protein_coding	Drg2	ENSMUST00000018568	protein_coding	principal1	11	1	60454591	1788
ENSMUSG00000106659	lincRNA	Gm42161	ENSMUST00000196278	lincRNA		5	1	113145328	726
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000196446	protein_coding		3	1	135438149	608
ENSMUSG00000106191	TEC	4930557B06Rik	ENSMUST00000200193	TEC		5	1	113142449	381
ENSMUSG00000036745	protein_coding	Ttll7	ENSMUST00000038090	retained_intron		3	1	146852367	2265
ENSMUSG00000106541	TEC	Gm43246	ENSMUST00000197597	TEC		5	1	113100516	564
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000016026	protein_coding		5	-1	45857513	4884
ENSMUSG00000101613	lincRNA	Gm28516	ENSMUST00000190257	lincRNA		8	1	92024442	663
ENSMUSG00000078962	lincRNA	4932414J04Rik	ENSMUST00000152483	lincRNA		11	-1	21511178	3059
ENSMUSG00000106206	TEC	Gm43094	ENSMUST00000196549	TEC		5	-1	113166234	921
ENSMUSG00000020537	protein_coding	Drg2	ENSMUST00000147745	retained_intron		11	1	60454624	567
ENSMUSG00000110380	lincRNA	Gm45332	ENSMUST00000210508	lincRNA		8	-1	92158266	1949
ENSMUSG00000078962	lincRNA	4932414J04Rik	ENSMUST00000165732	lincRNA		11	-1	21507718	2004
ENSMUSG00000085911	lincRNA	Gm14061	ENSMUST00000155923	lincRNA		2	1	138589392	1007
ENSMUSG00000029053	protein_coding	Prkcz	ENSMUST00000103178	protein_coding		4	-1	155345772	4083
ENSMUSG00000066383	protein_coding	Iqcf1	ENSMUST00000085114	protein_coding	principal4	9	1	106499992	613
ENSMUSG00000110198	lincRNA	Gm45335	ENSMUST00000210618	lincRNA		8	1	92172587	401
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000189859	protein_coding		5	-1	45857467	384
ENSMUSG00000020537	protein_coding	Drg2	ENSMUST00000136484	retained_intron		11	1	60459429	411
ENSMUSG00000033429	protein_coding	Mcee	ENSMUST00000037205	protein_coding	principal1	7	1	64392645	828
ENSMUSG00000110134	lincRNA	Gm45334	ENSMUST00000211118	lincRNA		8	1	92233125	1227
ENSMUSG00000020537	protein_coding	Drg2	ENSMUST00000155731	retained_intron		11	1	60461507	685
ENSMUSG00000066383	protein_coding	Iqcf1	ENSMUST00000215037	nonsense_mediated_decay		9	1	106500001	698
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000106291	protein_coding	principal2	3	1	135438234	1512
ENSMUSG00000106518	TEC	Gm42759	ENSMUST00000195915	TEC		5	1	98031567	2439
ENSMUSG00000109760	processed_pseudogene	Gm6503	ENSMUST00000210829	processed_pseudogene		8	1	56713049	2225
ENSMUSG00000105117	processed_pseudogene	Gm42760	ENSMUST00000199814	processed_pseudogene		5	1	98056793	311
ENSMUSG00000000359	protein_coding	Rem1	ENSMUST00000000369	protein_coding	principal1	2	1	152626951	1663
ENSMUSG00000110000	lincRNA	Gm33501	ENSMUST00000209257	lincRNA		8	-1	56888893	1193
ENSMUSG00000033429	protein_coding	Mcee	ENSMUST00000206882	protein_coding		7	1	64392740	391
ENSMUSG00000110000	lincRNA	Gm33501	ENSMUST00000209983	lincRNA		8	-1	56888890	706
ENSMUSG00000105441	processed_pseudogene	Gm8041	ENSMUST00000199755	processed_pseudogene		5	-1	98075918	616
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000199613	protein_coding	principal2	3	1	135438316	738
ENSMUSG00000098073	processed_pseudogene	Gm8048	ENSMUST00000182555	processed_pseudogene		5	1	98153181	996
ENSMUSG00000044600	protein_coding	Smim7	ENSMUST00000167290	protein_coding	principal1	8	-1	72571088	2892
ENSMUSG00000019845	protein_coding	Tube1	ENSMUST00000019991	protein_coding	principal1	10	1	39134023	2929
ENSMUSG00000000359	protein_coding	Rem1	ENSMUST00000150913	protein_coding		2	1	152626953	339
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000187615	nonsense_mediated_decay		5	-1	45857481	439
ENSMUSG00000033429	protein_coding	Mcee	ENSMUST00000206194	protein_coding		7	1	64392775	532
ENSMUSG00000000359	protein_coding	Rem1	ENSMUST00000139370	retained_intron		2	1	152632967	1444
ENSMUSG00000019845	protein_coding	Tube1	ENSMUST00000217214	retained_intron		10	1	39134027	1430
ENSMUSG00000118396	protein_coding	Iqcf2	ENSMUST00000189866	processed_transcript		9	-1	106544689	1147
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000067997	processed_transcript		5	-1	45857501	1174
ENSMUSG00000081225	protein_coding	Cyp2j12	ENSMUST00000121694	nonsense_mediated_decay		4	-1	96141152	1781
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000166033	protein_coding	principal2	3	1	135438480	2504
ENSMUSG00000044600	protein_coding	Smim7	ENSMUST00000058733	protein_coding		8	-1	72571049	642
ENSMUSG00000040734	protein_coding	Ppp1r13l	ENSMUST00000150448	processed_transcript		7	1	19359749	340
ENSMUSG00000118396	protein_coding	Iqcf2	ENSMUST00000215525	protein_coding	principal1	9	-1	106544686	627
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000156295	retained_intron		5	-1	45857615	678
ENSMUSG00000015882	protein_coding	Lcorl	ENSMUST00000186633	protein_coding		5	-1	45857488	351
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000197357	processed_transcript		3	1	135438529	418
ENSMUSG00000105953	TR_V_gene	Trav15d-2-dv6d-2	ENSMUST00000199800	TR_V_gene	principal1	14	1	52956782	398
ENSMUSG00000044600	protein_coding	Smim7	ENSMUST00000163745	retained_intron		8	-1	72571062	387
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000196591	protein_coding		3	1	135438533	380
ENSMUSG00000104613	processed_pseudogene	Gm8704	ENSMUST00000197181	processed_pseudogene		14	-1	52970374	435
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000198685	protein_coding		3	1	135438543	666
ENSMUSG00000093953	TR_V_gene	Trav3d-3	ENSMUST00000196023	TR_V_gene		14	1	52972448	427
ENSMUSG00000093953	TR_V_gene	Trav3d-3	ENSMUST00000103599	TR_V_gene	principal1	14	1	52972759	276
ENSMUSG00000019845	protein_coding	Tube1	ENSMUST00000213459	nonsense_mediated_decay		10	1	39134068	4192
ENSMUSG00000049100	protein_coding	Pcdh10	ENSMUST00000171554	protein_coding	alternative2	3	1	45378406	7273
ENSMUSG00000090868	TR_V_gene	Trav9d-4	ENSMUST00000200548	TR_V_gene	principal5	14	1	52983201	565
ENSMUSG00000019845	protein_coding	Tube1	ENSMUST00000213898	processed_transcript		10	1	39136967	1562
ENSMUSG00000090868	TR_V_gene	Trav9d-4	ENSMUST00000167409	TR_V_gene	alternative2	14	1	52983456	307
ENSMUSG00000118396	protein_coding	Iqcf2	ENSMUST00000062917	protein_coding		9	-1	106561625	1122
ENSMUSG00000019845	protein_coding	Tube1	ENSMUST00000214493	retained_intron		10	1	39143144	3525
ENSMUSG00000096505	TR_V_gene	Trav4d-4	ENSMUST00000103600	TR_V_gene	principal1	14	1	52990866	354
ENSMUSG00000081225	protein_coding	Cyp2j12	ENSMUST00000097972	protein_coding	principal1	4	-1	96141138	1675
ENSMUSG00000105386	processed_pseudogene	Gm43104	ENSMUST00000197234	processed_pseudogene		14	-1	52993267	311
ENSMUSG00000049100	protein_coding	Pcdh10	ENSMUST00000166126	protein_coding	principal4	3	1	45378425	7081
ENSMUSG00000066382	protein_coding	Iqcf5	ENSMUST00000085113	protein_coding	principal1	9	1	106514573	551
ENSMUSG00000110043	processed_pseudogene	Gm7328	ENSMUST00000211123	processed_pseudogene		8	1	56952829	2225
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000197859	protein_coding	principal2	3	1	135438565	3833
ENSMUSG00000027951	protein_coding	Adar	ENSMUST00000098924	protein_coding	alternative2	3	1	89715022	5909
ENSMUSG00000024401	protein_coding	Tnf	ENSMUST00000025263	protein_coding	principal1	17	-1	35202007	1639
ENSMUSG00000062074	protein_coding	Ccn6	ENSMUST00000076713	protein_coding	principal1	10	-1	39163794	1419
ENSMUSG00000087148	antisense	1700030C14Rik	ENSMUST00000139912	antisense		2	-1	152654330	756
ENSMUSG00000040734	protein_coding	Ppp1r13l	ENSMUST00000140836	protein_coding		7	1	19359770	720
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000199582	protein_coding		3	1	135438747	343
ENSMUSG00000024401	protein_coding	Tnf	ENSMUST00000167924	protein_coding		17	-1	35202004	1462
ENSMUSG00000031736	processed_transcript	Crnde	ENSMUST00000178064	lincRNA		8	-1	92346870	818
ENSMUSG00000096106	TR_V_gene	Trav5d-4	ENSMUST00000179701	TR_V_gene	principal1	14	1	53001713	343
ENSMUSG00000040734	protein_coding	Ppp1r13l	ENSMUST00000127785	protein_coding		7	1	19360646	841
ENSMUSG00000084089	processed_pseudogene	Gm14099	ENSMUST00000117769	processed_pseudogene		2	-1	132673989	605
ENSMUSG00000027951	protein_coding	Adar	ENSMUST00000123691	processed_transcript		3	1	89715332	519
ENSMUSG00000029053	protein_coding	Prkcz	ENSMUST00000030922	protein_coding	principal1	4	-1	155361361	2641
ENSMUSG00000018822	protein_coding	Sfrp5	ENSMUST00000018966	protein_coding	principal1	19	-1	42202252	1900
ENSMUSG00000087462	lincRNA	Gm2200	ENSMUST00000124814	lincRNA		X	1	29012994	764
ENSMUSG00000051029	protein_coding	Serpinb1b	ENSMUST00000222973	protein_coding		13	1	33078575	344
ENSMUSG00000095756	TR_V_gene	Trav6d-7	ENSMUST00000178650	TR_V_gene	principal1	14	1	53007612	358
ENSMUSG00000030165	protein_coding	Klrd1	ENSMUST00000112063	protein_coding	principal2	6	1	129591782	895
ENSMUSG00000081662	processed_pseudogene	Gm14098	ENSMUST00000119295	processed_pseudogene		2	1	132678269	623
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000041318	protein_coding	alternative1	8	1	95678085	3101
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000198748	nonsense_mediated_decay		3	1	135438754	787
ENSMUSG00000029053	protein_coding	Prkcz	ENSMUST00000140256	processed_transcript		4	-1	155268335	790
ENSMUSG00000029053	protein_coding	Prkcz	ENSMUST00000135699	processed_transcript		4	-1	155273042	574
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000196248	retained_intron		3	1	135438864	19300
ENSMUSG00000049100	protein_coding	Pcdh10	ENSMUST00000170695	protein_coding	alternative2	3	1	45378427	8234
ENSMUSG00000030165	protein_coding	Klrd1	ENSMUST00000119520	protein_coding	alternative2	6	1	129591810	919
ENSMUSG00000022236	protein_coding	Ropn1l	ENSMUST00000110408	protein_coding	principal1	15	-1	31453737	957
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000197539	protein_coding	principal2	3	1	135439137	2515
ENSMUSG00000030165	protein_coding	Klrd1	ENSMUST00000159804	nonsense_mediated_decay		6	1	129591825	538
ENSMUSG00000068964	processed_pseudogene	Gm6361	ENSMUST00000091031	processed_pseudogene		15	-1	31446817	435
ENSMUSG00000041009	protein_coding	Iqcf4	ENSMUST00000085111	protein_coding	principal1	9	-1	106570996	756
ENSMUSG00000049100	protein_coding	Pcdh10	ENSMUST00000195655	processed_transcript		3	1	45382633	634
ENSMUSG00000030165	protein_coding	Klrd1	ENSMUST00000203965	nonsense_mediated_decay		6	1	129595439	507
ENSMUSG00000081627	processed_pseudogene	Gm13158	ENSMUST00000122007	processed_pseudogene		4	1	147267373	736
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000197134	protein_coding	alternative1	3	1	135439211	2493
ENSMUSG00000029053	protein_coding	Prkcz	ENSMUST00000131975	protein_coding		4	-1	155345165	837
ENSMUSG00000103713	TEC	Gm2136	ENSMUST00000193945	TEC		3	1	45438380	2577
ENSMUSG00000031736	processed_transcript	Crnde	ENSMUST00000179421	lincRNA		8	-1	92355831	773
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000197814	retained_intron		3	1	135454626	799
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000196564	retained_intron		3	1	135458648	940
ENSMUSG00000015880	protein_coding	Ncapg	ENSMUST00000117396	protein_coding	principal1	5	1	45669919	3703
ENSMUSG00000030165	protein_coding	Klrd1	ENSMUST00000159077	retained_intron		6	1	129596490	580
ENSMUSG00000029053	protein_coding	Prkcz	ENSMUST00000123652	protein_coding		4	-1	155345382	586
ENSMUSG00000100799	antisense	1700027H10Rik	ENSMUST00000186818	antisense		3	-1	45439310	584
ENSMUSG00000112374	antisense	Gm48072	ENSMUST00000218358	antisense		10	-1	63075060	396
ENSMUSG00000078578	protein_coding	Ube2d3	ENSMUST00000196878	retained_intron		3	1	135462458	1912
ENSMUSG00000075020	lincRNA	Mir670hg	ENSMUST00000210851	lincRNA		2	-1	94264725	1148
ENSMUSG00000029053	protein_coding	Prkcz	ENSMUST00000139647	processed_transcript		4	-1	155345262	500
ENSMUSG00000030165	protein_coding	Klrd1	ENSMUST00000032268	protein_coding	alternative2	6	1	129591782	586
ENSMUSG00000075020	lincRNA	Mir670hg	ENSMUST00000209947	lincRNA		2	-1	94178915	1032
ENSMUSG00000075020	lincRNA	Mir670hg	ENSMUST00000211430	lincRNA		2	-1	94264918	1193
ENSMUSG00000075020	lincRNA	Mir670hg	ENSMUST00000210721	lincRNA		2	-1	94243338	122
ENSMUSG00000075020	lincRNA	Mir670hg	ENSMUST00000211619	lincRNA		2	-1	94264608	819
ENSMUSG00000091129	protein_coding	Iqcf6	ENSMUST00000238329	protein_coding	alternative2	9	1	106625981	1138
ENSMUSG00000006014	protein_coding	Prg4	ENSMUST00000162367	protein_coding		1	-1	150466165	1480
ENSMUSG00000029053	protein_coding	Prkcz	ENSMUST00000125320	processed_transcript		4	-1	155301171	363
ENSMUSG00000031736	processed_transcript	Crnde	ENSMUST00000034183	bidirectional_promoter_lncRNA		8	-1	92356120	1238
ENSMUSG00000091129	protein_coding	Iqcf6	ENSMUST00000171091	protein_coding	principal2	9	1	106626582	474
ENSMUSG00000075020	lincRNA	Mir670hg	ENSMUST00000129661	lincRNA		2	-1	94264739	855
ENSMUSG00000029053	protein_coding	Prkcz	ENSMUST00000145373	processed_transcript		4	-1	155344740	430
ENSMUSG00000040554	protein_coding	Aipl1	ENSMUST00000048207	protein_coding	principal1	11	-1	72037489	2309
ENSMUSG00000029053	protein_coding	Prkcz	ENSMUST00000105624	protein_coding		4	-1	155361340	694
ENSMUSG00000031736	processed_transcript	Crnde	ENSMUST00000179029	lincRNA		8	-1	92355891	417
ENSMUSG00000075020	lincRNA	Mir670hg	ENSMUST00000134563	lincRNA		2	-1	94264758	593
ENSMUSG00000031736	processed_transcript	Crnde	ENSMUST00000180102	lincRNA		8	-1	92355764	732
ENSMUSG00000051029	protein_coding	Serpinb1b	ENSMUST00000016951	protein_coding	principal1	13	1	33084125	1696
ENSMUSG00000051339	protein_coding	2900026A02Rik	ENSMUST00000212276	protein_coding	alternative2	5	-1	113137986	5864
ENSMUSG00000101411	antisense	Gm28111	ENSMUST00000187786	antisense		9	1	106640928	1393
ENSMUSG00000031736	processed_transcript	Crnde	ENSMUST00000179400	lincRNA		8	-1	92346870	651
ENSMUSG00000040554	protein_coding	Aipl1	ENSMUST00000059082	nonsense_mediated_decay		11	-1	72037509	2403
ENSMUSG00000031736	processed_transcript	Crnde	ENSMUST00000179222	lincRNA		8	-1	92355869	419
ENSMUSG00000095651	lincRNA	Gm21817	ENSMUST00000178584	lincRNA		8	-1	92339250	2583
ENSMUSG00000061607	protein_coding	Mdc1	ENSMUST00000082337	protein_coding	principal1	17	1	35841515	7335
ENSMUSG00000006014	protein_coding	Prg4	ENSMUST00000161611	protein_coding	principal1	1	-1	150466165	3821
ENSMUSG00000051339	protein_coding	2900026A02Rik	ENSMUST00000050125	protein_coding	principal3	5	-1	113163351	5876
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000166358	nonsense_mediated_decay		8	1	95678245	2963
ENSMUSG00000006014	protein_coding	Prg4	ENSMUST00000161320	protein_coding		1	-1	150466165	577
ENSMUSG00000040734	protein_coding	Ppp1r13l	ENSMUST00000047621	protein_coding	principal1	7	1	19361216	3130
ENSMUSG00000006014	protein_coding	Prg4	ENSMUST00000159035	protein_coding		1	-1	150466165	337
ENSMUSG00000038369	protein_coding	Ncoa6	ENSMUST00000109670	protein_coding	principal2	2	-1	155473806	7101
ENSMUSG00000023192	protein_coding	Grm2	ENSMUST00000200826	protein_coding		9	-1	106648103	2181
ENSMUSG00000061607	protein_coding	Mdc1	ENSMUST00000174124	protein_coding		17	1	35841676	422
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000031651	protein_coding	principal2	5	1	147430161	5048
ENSMUSG00000078546	protein_coding	Zfp995	ENSMUST00000190066	protein_coding	principal1	17	-1	21909926	2221
ENSMUSG00000040734	protein_coding	Ppp1r13l	ENSMUST00000132655	protein_coding		7	1	19368498	386
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000073139	protein_coding	alternative1	8	1	95703037	2966
ENSMUSG00000051339	protein_coding	2900026A02Rik	ENSMUST00000211733	protein_coding	alternative2	5	-1	113221236	10238
ENSMUSG00000091155	protein_coding	Serpine3	ENSMUST00000171692	protein_coding	principal1	14	1	62663667	1402
ENSMUSG00000038369	protein_coding	Ncoa6	ENSMUST00000123293	protein_coding		2	-1	155473894	4850
ENSMUSG00000027951	protein_coding	Adar	ENSMUST00000029563	protein_coding	principal4	3	1	89730748	3753
ENSMUSG00000020072	protein_coding	Pbld2	ENSMUST00000124784	protein_coding		10	1	63024315	555
ENSMUSG00000104576	TEC	F830115B05Rik	ENSMUST00000197638	TEC		5	-1	113119464	1894
ENSMUSG00000045238	antisense	A730035I17Rik	ENSMUST00000057889	antisense		5	-1	98185984	2248
ENSMUSG00000078546	protein_coding	Zfp995	ENSMUST00000189719	processed_transcript		17	-1	21909639	845
ENSMUSG00000038369	protein_coding	Ncoa6	ENSMUST00000134508	processed_transcript		2	-1	155473824	413
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000195800	nonsense_mediated_decay		1	1	159232320	753
ENSMUSG00000038369	protein_coding	Ncoa6	ENSMUST00000109669	protein_coding	alternative2	2	-1	155440785	2379
ENSMUSG00000045238	antisense	A730035I17Rik	ENSMUST00000197527	antisense		5	-1	98185210	634
ENSMUSG00000028619	protein_coding	Tceanc2	ENSMUST00000057043	protein_coding	principal1	4	-1	107178547	6431
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000080666	protein_coding	principal3	8	1	95703063	2738
ENSMUSG00000036745	protein_coding	Ttll7	ENSMUST00000037942	protein_coding	principal2	3	1	146852367	7394
ENSMUSG00000015880	protein_coding	Ncapg	ENSMUST00000134309	retained_intron		5	1	45676013	3975
ENSMUSG00000045238	antisense	A730035I17Rik	ENSMUST00000197382	antisense		5	-1	98185782	1759
ENSMUSG00000078546	protein_coding	Zfp995	ENSMUST00000186313	processed_transcript		17	-1	21908165	538
ENSMUSG00000036745	protein_coding	Ttll7	ENSMUST00000106134	protein_coding	alternative2	3	1	146894176	2664
ENSMUSG00000045238	antisense	A730035I17Rik	ENSMUST00000198172	antisense		5	-1	98185213	492
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000164304	protein_coding	principal1	19	-1	5663680	3584
ENSMUSG00000015880	protein_coding	Ncapg	ENSMUST00000129562	retained_intron		5	1	45677864	803
ENSMUSG00000078546	protein_coding	Zfp995	ENSMUST00000185948	retained_intron		17	-1	21909925	533
ENSMUSG00000045238	antisense	A730035I17Rik	ENSMUST00000205851	pseudogene		5	-1	98185984	684
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000212160	protein_coding		8	1	95703070	678
ENSMUSG00000027951	protein_coding	Adar	ENSMUST00000121094	protein_coding		3	1	89730748	2321
ENSMUSG00000078546	protein_coding	Zfp995	ENSMUST00000106026	protein_coding	principal1	17	-1	21908092	1744
ENSMUSG00000020212	protein_coding	Mdm1	ENSMUST00000219827	processed_transcript		10	1	118141811	318
ENSMUSG00000027951	protein_coding	Adar	ENSMUST00000118341	protein_coding		3	1	89730748	2399
ENSMUSG00000036745	protein_coding	Ttll7	ENSMUST00000124743	protein_coding		3	1	146896656	832
ENSMUSG00000038369	protein_coding	Ncoa6	ENSMUST00000146942	retained_intron		2	-1	155403561	1631
ENSMUSG00000028619	protein_coding	Tceanc2	ENSMUST00000127720	nonsense_mediated_decay		4	-1	107178366	993
ENSMUSG00000027951	protein_coding	Adar	ENSMUST00000107405	protein_coding	alternative2	3	1	89730748	5871
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000236006	protein_coding	principal1	19	-1	5661635	3513
ENSMUSG00000061607	protein_coding	Mdc1	ENSMUST00000225192	protein_coding		17	1	35848501	649
ENSMUSG00000117049	processed_pseudogene	Gm6540	ENSMUST00000233196	processed_pseudogene		17	-1	21921172	969
ENSMUSG00000038369	protein_coding	Ncoa6	ENSMUST00000143909	retained_intron		2	-1	155396826	1659
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000160915	nonsense_mediated_decay		8	1	95706574	713
ENSMUSG00000081009	unprocessed_pseudogene	Gm14065	ENSMUST00000120848	unprocessed_pseudogene		2	1	138872023	585
ENSMUSG00000023192	protein_coding	Grm2	ENSMUST00000023959	protein_coding	principal1	9	-1	106656080	4711
ENSMUSG00000015880	protein_coding	Ncapg	ENSMUST00000198274	retained_intron		5	1	45677915	2440
ENSMUSG00000038369	protein_coding	Ncoa6	ENSMUST00000141928	processed_transcript		2	-1	155418903	648
ENSMUSG00000028619	protein_coding	Tceanc2	ENSMUST00000129220	processed_transcript		4	-1	107178283	389
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000159851	retained_intron		8	1	95709110	820
ENSMUSG00000027951	protein_coding	Adar	ENSMUST00000150637	retained_intron		3	1	89737586	708
ENSMUSG00000015880	protein_coding	Ncapg	ENSMUST00000134090	retained_intron		5	1	45692050	3154
ENSMUSG00000028619	protein_coding	Tceanc2	ENSMUST00000030362	protein_coding	principal1	4	-1	107179103	935
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176600	protein_coding	alternative2	5	1	147430453	5541
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000162578	protein_coding		8	1	95709907	916
ENSMUSG00000036745	protein_coding	Ttll7	ENSMUST00000197547	retained_intron		3	1	146943920	3130
ENSMUSG00000015880	protein_coding	Ncapg	ENSMUST00000123396	retained_intron		5	1	45698666	468
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000200730	nonsense_mediated_decay		5	1	31193294	2019
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000159632	retained_intron		8	1	95710466	741
ENSMUSG00000105457	TEC	Gm43200	ENSMUST00000200385	TEC		5	-1	45772180	2161
ENSMUSG00000035456	protein_coding	Prdm8	ENSMUST00000210477	protein_coding	principal1	5	1	98167198	3316
ENSMUSG00000023192	protein_coding	Grm2	ENSMUST00000201681	protein_coding		9	-1	106656082	2111
ENSMUSG00000027951	protein_coding	Adar	ENSMUST00000131030	retained_intron		3	1	89745645	481
ENSMUSG00000028619	protein_coding	Tceanc2	ENSMUST00000058585	protein_coding	principal1	4	-1	107178282	766
ENSMUSG00000036564	protein_coding	Ndrg4	ENSMUST00000161314	retained_intron		8	1	95711897	505
ENSMUSG00000117792	processed_transcript	4930588A03Rik	ENSMUST00000236720	sense_overlapping		18	-1	43079217	902
ENSMUSG00000071267	protein_coding	Zfp942	ENSMUST00000091879	protein_coding	principal1	17	-1	21962451	3265
ENSMUSG00000101587	transcribed_processed_pseudogene	Gm29036	ENSMUST00000189967	transcribed_processed_pseudogene		5	-1	45769743	877
ENSMUSG00000038369	protein_coding	Ncoa6	ENSMUST00000043126	protein_coding	principal2	2	-1	155440783	6872
ENSMUSG00000006014	protein_coding	Prg4	ENSMUST00000006171	protein_coding		1	-1	150465598	1869
ENSMUSG00000023192	protein_coding	Grm2	ENSMUST00000201955	processed_transcript		9	-1	106646613	448
ENSMUSG00000028619	protein_coding	Tceanc2	ENSMUST00000141165	protein_coding		4	-1	107179116	733
ENSMUSG00000099784	lincRNA	Dalir	ENSMUST00000188773	lincRNA		1	1	42750712	2170
ENSMUSG00000104852	TEC	Gm43201	ENSMUST00000195925	TEC		5	-1	45761690	3416
ENSMUSG00000036745	protein_coding	Ttll7	ENSMUST00000170055	protein_coding	alternative2	3	1	146852367	6075
ENSMUSG00000006014	protein_coding	Prg4	ENSMUST00000164600	protein_coding	principal1	1	-1	150465598	4263
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000201535	protein_coding		5	1	31193306	765
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000202884	processed_transcript		5	1	147430896	451
ENSMUSG00000028619	protein_coding	Tceanc2	ENSMUST00000132526	processed_transcript		4	-1	107177851	319
ENSMUSG00000071267	protein_coding	Zfp942	ENSMUST00000126485	retained_intron		17	-1	21962464	2481
ENSMUSG00000117792	processed_transcript	4930588A03Rik	ENSMUST00000236277	processed_transcript		18	-1	43171274	1389
ENSMUSG00000104342	TEC	Gm36401	ENSMUST00000194255	TEC		5	1	45702733	2028
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176202	retained_intron		5	1	147430896	522
ENSMUSG00000071267	protein_coding	Zfp942	ENSMUST00000074295	protein_coding	principal1	17	-1	21933022	1461
ENSMUSG00000117792	processed_transcript	4930588A03Rik	ENSMUST00000237395	sense_overlapping		18	-1	43171188	704
ENSMUSG00000117792	processed_transcript	4930588A03Rik	ENSMUST00000237566	sense_overlapping		18	-1	43171188	626
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000202323	retained_intron		5	1	31193306	2332
ENSMUSG00000117792	processed_transcript	4930588A03Rik	ENSMUST00000235443	retained_intron		18	-1	43171188	869
ENSMUSG00000035456	protein_coding	Prdm8	ENSMUST00000112959	protein_coding	principal1	5	1	98180978	4553
ENSMUSG00000028619	protein_coding	Tceanc2	ENSMUST00000147375	processed_transcript		4	-1	107178208	541
ENSMUSG00000028619	protein_coding	Tceanc2	ENSMUST00000131474	processed_transcript		4	-1	107177668	113
ENSMUSG00000112950	lincRNA	Gm32369	ENSMUST00000222630	lincRNA		12	-1	70681850	1467
ENSMUSG00000082925	processed_pseudogene	Gm13135	ENSMUST00000117628	processed_pseudogene		4	1	147275976	3121
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000202124	nonsense_mediated_decay		5	1	31193335	1647
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000202032	retained_intron		5	1	31193854	2111
ENSMUSG00000084115	processed_pseudogene	Gm13566	ENSMUST00000117428	processed_pseudogene		2	1	60577537	1142
ENSMUSG00000114005	lincRNA	Gm24474	ENSMUST00000220504	lincRNA		12	1	70650182	469
ENSMUSG00000094318	processed_pseudogene	Gm13144	ENSMUST00000179385	processed_pseudogene		4	-1	147281790	345
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000202743	retained_intron		5	1	31194843	731
ENSMUSG00000083195	processed_pseudogene	Gm13567	ENSMUST00000118026	processed_pseudogene		2	-1	60596294	247
ENSMUSG00000114159	lincRNA	Gm48866	ENSMUST00000220699	lincRNA		12	1	70674123	343
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000202318	retained_intron		5	1	31195373	641
ENSMUSG00000113900	lincRNA	Gm40437	ENSMUST00000222338	lincRNA		12	-1	70825345	767
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000201835	retained_intron		5	1	31195842	786
ENSMUSG00000029146	protein_coding	Snx17	ENSMUST00000201343	processed_transcript		5	1	31196050	764
ENSMUSG00000020072	protein_coding	Pbld2	ENSMUST00000020262	protein_coding	principal1	10	1	63024512	2212
ENSMUSG00000024500	protein_coding	Ppp2r2b	ENSMUST00000136118	processed_transcript		18	-1	42899503	2237
ENSMUSG00000006014	protein_coding	Prg4	ENSMUST00000111901	protein_coding		1	-1	150465598	3495
ENSMUSG00000006014	protein_coding	Prg4	ENSMUST00000111902	protein_coding		1	-1	150465598	3636
ENSMUSG00000020072	protein_coding	Pbld2	ENSMUST00000130531	retained_intron		10	1	63054210	847
ENSMUSG00000073676	protein_coding	Hspe1	ENSMUST00000075242	protein_coding	principal1	1	1	55088132	774
ENSMUSG00000112129	protein_coding	Pbld1	ENSMUST00000219204	processed_transcript		10	1	63060162	523
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176466	nonsense_mediated_decay		5	1	147430896	1049
ENSMUSG00000086328	lincRNA	2700033N17Rik	ENSMUST00000140185	lincRNA		2	-1	116067444	721
ENSMUSG00000073676	protein_coding	Hspe1	ENSMUST00000134628	retained_intron		1	1	55088314	964
ENSMUSG00000092261	processed_pseudogene	Gm20519	ENSMUST00000173684	processed_pseudogene		9	-1	21533985	359
ENSMUSG00000115186	antisense	Gm49417	ENSMUST00000228730	antisense		14	1	70205324	1637
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000177327	retained_intron		5	1	147450656	600
ENSMUSG00000112129	protein_coding	Pbld1	ENSMUST00000219687	protein_coding		10	1	63060713	788
ENSMUSG00000112129	protein_coding	Pbld1	ENSMUST00000219045	protein_coding		10	1	63060729	602
ENSMUSG00000115186	antisense	Gm49417	ENSMUST00000226259	antisense		14	1	70207751	753
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000080824	protein_coding	principal1	19	-1	5663620	3741
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000050149	protein_coding	principal3	7	1	112225856	6669
ENSMUSG00000023999	protein_coding	Kif6	ENSMUST00000024798	retained_intron		17	1	49615136	1676
ENSMUSG00000030149	protein_coding	Klrk1	ENSMUST00000168919	protein_coding	alternative2	6	-1	129623864	3197
ENSMUSG00000027950	protein_coding	Chrnb2	ENSMUST00000200558	protein_coding		3	-1	89764608	3482
ENSMUSG00000027950	protein_coding	Chrnb2	ENSMUST00000199372	processed_transcript		3	-1	89763401	6145
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000071857	protein_coding	principal1	19	-1	5663660	3812
ENSMUSG00000043059	protein_coding	Zfp513	ENSMUST00000114590	protein_coding	principal1	5	-1	31202303	2228
ENSMUSG00000020964	protein_coding	Sel1l	ENSMUST00000021347	protein_coding	principal1	12	-1	91849157	6300
ENSMUSG00000023999	protein_coding	Kif6	ENSMUST00000162029	nonsense_mediated_decay		17	1	49615139	686
ENSMUSG00000020964	protein_coding	Sel1l	ENSMUST00000165282	processed_transcript		12	-1	91813960	509
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000106647	retained_intron		7	1	112225890	1572
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000236464	protein_coding		19	-1	5663660	2801
ENSMUSG00000027950	protein_coding	Chrnb2	ENSMUST00000029562	protein_coding	principal1	3	-1	89764632	6399
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000210690	protein_coding	principal2	7	-1	45062677	1623
ENSMUSG00000071112	protein_coding	Spx	ENSMUST00000126521	protein_coding	principal1	6	1	142413441	357
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000237874	protein_coding	principal1	19	-1	5663652	3456
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000211084	retained_intron		7	-1	45054880	665
ENSMUSG00000030149	protein_coding	Klrk1	ENSMUST00000032252	protein_coding	principal4	6	-1	129622772	1270
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000236332	retained_intron		19	-1	5652276	245
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000238092	processed_transcript		19	-1	5654837	679
ENSMUSG00000043059	protein_coding	Zfp513	ENSMUST00000031562	protein_coding		5	-1	31202042	2213
ENSMUSG00000020964	protein_coding	Sel1l	ENSMUST00000167466	protein_coding		12	-1	91849129	5544
ENSMUSG00000024659	protein_coding	Anxa1	ENSMUST00000235280	protein_coding	principal1	19	-1	20390673	1622
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000236486	retained_intron		19	-1	5663636	2893
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000209920	nonsense_mediated_decay		7	-1	45061705	876
ENSMUSG00000035161	protein_coding	Ints6	ENSMUST00000053959	protein_coding	principal1	14	-1	62761112	4993
ENSMUSG00000030149	protein_coding	Klrk1	ENSMUST00000095412	protein_coding	alternative2	6	-1	129623841	1019
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000211337	protein_coding		7	-1	45061706	676
ENSMUSG00000043059	protein_coding	Zfp513	ENSMUST00000201119	processed_transcript		5	-1	31200761	566
ENSMUSG00000071112	protein_coding	Spx	ENSMUST00000141548	retained_intron		6	1	142414012	1432
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000210500	protein_coding	alternative2	7	-1	45061658	922
ENSMUSG00000071112	protein_coding	Spx	ENSMUST00000123209	retained_intron		6	1	142414521	1613
ENSMUSG00000035161	protein_coding	Ints6	ENSMUST00000223585	protein_coding	principal1	14	-1	62761112	10883
ENSMUSG00000030149	protein_coding	Klrk1	ENSMUST00000152256	retained_intron		6	-1	129622581	1182
ENSMUSG00000024659	protein_coding	Anxa1	ENSMUST00000025561	protein_coding	principal1	19	-1	20390944	1674
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000211014	protein_coding		7	-1	45062677	926
ENSMUSG00000043059	protein_coding	Zfp513	ENSMUST00000201968	protein_coding		5	-1	31200286	307
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000237544	protein_coding		19	-1	5663695	388
ENSMUSG00000071112	protein_coding	Spx	ENSMUST00000211094	protein_coding		6	1	142413441	1510
ENSMUSG00000030149	protein_coding	Klrk1	ENSMUST00000137660	retained_intron		6	-1	129622684	501
ENSMUSG00000023999	protein_coding	Kif6	ENSMUST00000162854	protein_coding	principal1	17	1	49615172	3528
ENSMUSG00000112129	protein_coding	Pbld1	ENSMUST00000178684	protein_coding	principal2	10	1	63061582	2404
ENSMUSG00000024659	protein_coding	Anxa1	ENSMUST00000171423	nonsense_mediated_decay		19	-1	20390761	1573
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000238020	processed_transcript		19	-1	5663655	470
ENSMUSG00000030149	protein_coding	Klrk1	ENSMUST00000204694	retained_intron		6	-1	129623860	3259
ENSMUSG00000035161	protein_coding	Ints6	ENSMUST00000225700	processed_transcript		14	-1	62704898	366
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000117172	protein_coding		1	1	37026596	1636
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000236827	processed_transcript		19	-1	5663627	143
ENSMUSG00000023999	protein_coding	Kif6	ENSMUST00000160049	retained_intron		17	1	49714110	614
ENSMUSG00000035161	protein_coding	Ints6	ENSMUST00000224891	retained_intron		14	-1	62709019	639
ENSMUSG00000112129	protein_coding	Pbld1	ENSMUST00000218401	retained_intron		10	1	63063804	325
ENSMUSG00000075125	protein_coding	Olfr1181	ENSMUST00000213190	protein_coding	principal1	2	-1	88426171	3934
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000209417	processed_transcript		7	-1	45062404	456
ENSMUSG00000112129	protein_coding	Pbld1	ENSMUST00000219829	protein_coding		10	1	63067466	748
ENSMUSG00000023999	protein_coding	Kif6	ENSMUST00000159396	retained_intron		17	1	49738753	498
ENSMUSG00000043059	protein_coding	Zfp513	ENSMUST00000200992	processed_transcript		5	-1	31200762	530
ENSMUSG00000026670	protein_coding	Uap1	ENSMUST00000111350	protein_coding	alternative1	1	-1	170174957	2311
ENSMUSG00000024659	protein_coding	Anxa1	ENSMUST00000163902	retained_intron		19	-1	20375587	578
ENSMUSG00000075125	protein_coding	Olfr1181	ENSMUST00000102619	protein_coding	principal1	2	-1	88426023	1240
ENSMUSG00000043059	protein_coding	Zfp513	ENSMUST00000201078	processed_transcript		5	-1	31200762	419
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000210493	protein_coding		7	-1	45061676	725
ENSMUSG00000023999	protein_coding	Kif6	ENSMUST00000162419	retained_intron		17	1	49753911	765
ENSMUSG00000075125	protein_coding	Olfr1181	ENSMUST00000099823	protein_coding	principal1	2	-1	88424023	936
ENSMUSG00000043059	protein_coding	Zfp513	ENSMUST00000202929	protein_coding		5	-1	31202215	383
ENSMUSG00000112129	protein_coding	Pbld1	ENSMUST00000020266	protein_coding	alternative1	10	1	63061582	2407
ENSMUSG00000024659	protein_coding	Anxa1	ENSMUST00000167668	retained_intron		19	-1	20378589	217
ENSMUSG00000056917	protein_coding	Sipa1	ENSMUST00000169854	protein_coding	principal1	19	-1	5663707	3583
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000106648	retained_intron		7	1	112225890	4136
ENSMUSG00000035161	protein_coding	Ints6	ENSMUST00000225406	retained_intron		14	-1	62761138	2894
ENSMUSG00000023999	protein_coding	Kif6	ENSMUST00000159354	retained_intron		17	1	49887628	3327
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000210101	protein_coding		7	-1	45062347	1345
ENSMUSG00000024659	protein_coding	Anxa1	ENSMUST00000165518	retained_intron		19	-1	20380021	490
ENSMUSG00000043059	protein_coding	Zfp513	ENSMUST00000201231	protein_coding		5	-1	31202225	584
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000124404	non_stop_decay		1	1	37029304	1252
ENSMUSG00000090012	antisense	Gm16555	ENSMUST00000159971	antisense		17	-1	49821825	1199
ENSMUSG00000035161	protein_coding	Ints6	ENSMUST00000225250	processed_transcript		14	-1	62761169	700
ENSMUSG00000024962	protein_coding	Vegfb	ENSMUST00000130048	protein_coding	principal1	19	-1	6987629	1158
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000235343	protein_coding	principal2	18	1	64887705	3792
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000209219	protein_coding		7	-1	45062403	362
ENSMUSG00000037780	protein_coding	Mbl1	ENSMUST00000225792	protein_coding	principal1	14	1	41151458	1563
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000067178	protein_coding		1	1	37029316	1769
ENSMUSG00000090227	antisense	Gm16554	ENSMUST00000159471	antisense		17	-1	49895967	460
ENSMUSG00000035161	protein_coding	Ints6	ENSMUST00000225193	retained_intron		14	-1	62761133	2402
ENSMUSG00000087030	antisense	Gm16143	ENSMUST00000155982	antisense		10	-1	63057467	538
ENSMUSG00000024659	protein_coding	Anxa1	ENSMUST00000168020	retained_intron		19	-1	20382125	585
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000235204	processed_transcript		18	1	64887832	776
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000177465	nonsense_mediated_decay		5	1	147450660	2544
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000236209	protein_coding		18	1	64887832	3254
ENSMUSG00000007837	protein_coding	Prrg2	ENSMUST00000007981	protein_coding	principal2	7	-1	45061652	1295
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176753	protein_coding		5	1	147450660	2264
ENSMUSG00000037780	protein_coding	Mbl1	ENSMUST00000047095	nonsense_mediated_decay		14	1	41151501	885
ENSMUSG00000024659	protein_coding	Anxa1	ENSMUST00000164587	processed_transcript		19	-1	20390651	652
ENSMUSG00000020088	protein_coding	Sar1a	ENSMUST00000220372	protein_coding		10	1	61680299	651
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000200885	protein_coding		5	1	147450740	468
ENSMUSG00000117812	processed_pseudogene	Gm50283	ENSMUST00000235150	processed_pseudogene		18	-1	56600935	274
ENSMUSG00000026670	protein_coding	Uap1	ENSMUST00000111351	protein_coding	alternative1	1	-1	170174946	2287
ENSMUSG00000117038	processed_transcript	Gm49880	ENSMUST00000232749	processed_transcript		17	-1	74079046	748
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000201799	retained_intron		5	1	147451744	2366
ENSMUSG00000117226	lincRNA	Gm31084	ENSMUST00000233429	lincRNA		17	-1	74079046	1294
ENSMUSG00000117226	lincRNA	Gm31084	ENSMUST00000233374	lincRNA		17	-1	74079137	662
ENSMUSG00000118153	lincRNA	Gm50288	ENSMUST00000236670	lincRNA		18	-1	56621097	306
ENSMUSG00000117226	lincRNA	Gm31084	ENSMUST00000232738	lincRNA		17	-1	74079046	414
ENSMUSG00000117226	lincRNA	Gm31084	ENSMUST00000233356	lincRNA		17	-1	74080293	446
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176357	processed_transcript		5	1	147453258	305
ENSMUSG00000026670	protein_coding	Uap1	ENSMUST00000161492	retained_intron		1	-1	170143713	856
ENSMUSG00000024962	protein_coding	Vegfb	ENSMUST00000025914	protein_coding		19	-1	6987651	1281
ENSMUSG00000118275	processed_pseudogene	Gm50289	ENSMUST00000235398	processed_pseudogene		18	1	56667778	445
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000037991	protein_coding	alternative2	7	1	112271299	3352
ENSMUSG00000024962	protein_coding	Vegfb	ENSMUST00000147924	retained_intron		19	-1	6987140	460
ENSMUSG00000021575	protein_coding	Ahrr	ENSMUST00000022059	protein_coding	principal1	13	-1	74292331	4754
ENSMUSG00000070327	protein_coding	Rnf213	ENSMUST00000131035	protein_coding	principal5	11	1	119393100	16716
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000150428	retained_intron		7	1	112316029	4495
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176596	nonsense_mediated_decay		5	1	147453289	4152
ENSMUSG00000026670	protein_coding	Uap1	ENSMUST00000162253	retained_intron		1	-1	170174792	1896
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000238425	nonsense_mediated_decay		1	1	37029333	4095
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000201248	retained_intron		5	1	147517502	3749
ENSMUSG00000026670	protein_coding	Uap1	ENSMUST00000160848	processed_transcript		1	-1	170161951	409
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000047899	protein_coding	principal2	14	1	51884842	1623
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000177328	retained_intron		5	1	147519286	792
ENSMUSG00000020088	protein_coding	Sar1a	ENSMUST00000020285	protein_coding	principal1	10	1	61680310	2613
ENSMUSG00000070327	protein_coding	Rnf213	ENSMUST00000093902	protein_coding	alternative2	11	1	119393100	16716
ENSMUSG00000026670	protein_coding	Uap1	ENSMUST00000191797	processed_transcript		1	-1	170174766	387
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000238500	protein_coding	principal1	1	1	37029333	4717
ENSMUSG00000020964	protein_coding	Sel1l	ENSMUST00000166691	retained_intron		12	-1	91849130	4287
ENSMUSG00000026546	protein_coding	Cfap45	ENSMUST00000194051	retained_intron		1	1	172520801	3426
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000144509	protein_coding		7	1	112346729	676
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000175807	protein_coding		5	1	147519687	3486
ENSMUSG00000020964	protein_coding	Sel1l	ENSMUST00000171465	retained_intron		12	-1	91818248	592
ENSMUSG00000026670	protein_coding	Uap1	ENSMUST00000161112	retained_intron		1	-1	170174789	676
ENSMUSG00000020964	protein_coding	Sel1l	ENSMUST00000167594	retained_intron		12	-1	91849130	1402
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000202732	retained_intron		5	1	147526093	671
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000162449	protein_coding		1	1	37029384	1360
ENSMUSG00000020964	protein_coding	Sel1l	ENSMUST00000171959	retained_intron		12	-1	91831932	820
ENSMUSG00000020088	protein_coding	Sar1a	ENSMUST00000218172	retained_intron		10	1	61680330	501
ENSMUSG00000026670	protein_coding	Uap1	ENSMUST00000191690	processed_transcript		1	-1	170174886	369
ENSMUSG00000070327	protein_coding	Rnf213	ENSMUST00000172235	protein_coding		11	1	119478057	2422
ENSMUSG00000021575	protein_coding	Ahrr	ENSMUST00000109640	protein_coding		13	-1	74292297	2419
ENSMUSG00000066279	protein_coding	Chrna10	ENSMUST00000084830	protein_coding	principal1	7	-1	102116713	2513
ENSMUSG00000058163	protein_coding	Gm5431	ENSMUST00000109210	protein_coding		11	-1	48902152	2971
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176505	retained_intron		5	1	147529733	3207
ENSMUSG00000020088	protein_coding	Sar1a	ENSMUST00000219506	protein_coding	principal1	10	1	61680365	897
ENSMUSG00000020964	protein_coding	Sel1l	ENSMUST00000172246	retained_intron		12	-1	91849139	1484
ENSMUSG00000109408	processed_transcript	A930037H05Rik	ENSMUST00000207133	bidirectional_promoter_lncRNA		11	-1	119491298	404
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000215412	nonsense_mediated_decay		7	1	112349394	2737
ENSMUSG00000058163	protein_coding	Gm5431	ENSMUST00000109212	protein_coding	principal1	11	-1	48902214	3063
ENSMUSG00000066279	protein_coding	Chrna10	ENSMUST00000211408	protein_coding		7	-1	102116828	377
ENSMUSG00000020088	protein_coding	Sar1a	ENSMUST00000218474	protein_coding		10	1	61680367	357
ENSMUSG00000109408	processed_transcript	A930037H05Rik	ENSMUST00000208476	bidirectional_promoter_lncRNA		11	-1	119491189	2853
ENSMUSG00000058163	protein_coding	Gm5431	ENSMUST00000109209	protein_coding		11	-1	48894712	1701
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176806	retained_intron		5	1	147529938	712
ENSMUSG00000020964	protein_coding	Sel1l	ENSMUST00000169843	retained_intron		12	-1	91849140	617
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176817	processed_transcript		5	1	147530014	322
ENSMUSG00000020088	protein_coding	Sar1a	ENSMUST00000219055	protein_coding		10	1	61680611	334
ENSMUSG00000020964	protein_coding	Sel1l	ENSMUST00000178462	protein_coding		12	-1	91849157	6150
ENSMUSG00000057191	protein_coding	AB124611	ENSMUST00000086361	protein_coding	alternative2	9	1	21526176	1310
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000202559	retained_intron		5	1	147531401	1899
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000177496	retained_intron		5	1	147536324	468
ENSMUSG00000020088	protein_coding	Sar1a	ENSMUST00000218741	nonsense_mediated_decay		10	1	61685079	406
ENSMUSG00000040813	protein_coding	Tex264	ENSMUST00000169068	protein_coding	principal1	9	-1	106685682	1364
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176856	processed_transcript		5	1	147537216	468
ENSMUSG00000026670	protein_coding	Uap1	ENSMUST00000027981	protein_coding	principal3	1	-1	170174946	2283
ENSMUSG00000050870	protein_coding	Mrgprb8	ENSMUST00000056676	protein_coding	principal1	7	1	48388526	1123
ENSMUSG00000020088	protein_coding	Sar1a	ENSMUST00000218968	retained_intron		10	1	61689537	483
ENSMUSG00000038541	protein_coding	Srd5a2	ENSMUST00000043458	protein_coding	principal1	17	-1	74047916	1605
ENSMUSG00000029647	protein_coding	Pan3	ENSMUST00000176553	protein_coding		5	1	147539277	716
ENSMUSG00000020088	protein_coding	Sar1a	ENSMUST00000219174	retained_intron		10	1	61691125	319
ENSMUSG00000109408	processed_transcript	A930037H05Rik	ENSMUST00000207446	bidirectional_promoter_lncRNA		11	-1	119491235	4320
ENSMUSG00000107085	processed_pseudogene	Gm42883	ENSMUST00000202594	processed_pseudogene		5	1	147439390	222
ENSMUSG00000109408	processed_transcript	A930037H05Rik	ENSMUST00000208152	retained_intron		11	-1	119480432	4381
ENSMUSG00000109408	processed_transcript	A930037H05Rik	ENSMUST00000207273	bidirectional_promoter_lncRNA		11	-1	119491235	626
ENSMUSG00000105721	TR_V_gene	Trav7d-6	ENSMUST00000196756	TR_V_gene	principal1	14	1	53020416	380
ENSMUSG00000021575	protein_coding	Ahrr	ENSMUST00000148438	retained_intron		13	-1	74257545	5099
ENSMUSG00000040813	protein_coding	Tex264	ENSMUST00000163441	protein_coding	principal1	9	-1	106685823	1896
ENSMUSG00000109408	processed_transcript	A930037H05Rik	ENSMUST00000208034	retained_intron		11	-1	119491235	528
ENSMUSG00000021575	protein_coding	Ahrr	ENSMUST00000222649	processed_transcript		13	-1	74265465	401
ENSMUSG00000021575	protein_coding	Ahrr	ENSMUST00000137538	processed_transcript		13	-1	74260672	363
ENSMUSG00000082526	processed_pseudogene	Gm14067	ENSMUST00000119340	processed_pseudogene		2	-1	138916932	314
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000225057	processed_transcript		18	1	64887848	381
ENSMUSG00000021575	protein_coding	Ahrr	ENSMUST00000123058	processed_transcript		13	-1	74261428	319
ENSMUSG00000021575	protein_coding	Ahrr	ENSMUST00000222032	processed_transcript		13	-1	74265465	341
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000236736	protein_coding	alternative2	18	1	64887958	4802
ENSMUSG00000082285	unprocessed_pseudogene	Gm14069	ENSMUST00000120815	unprocessed_pseudogene		2	-1	139176125	229
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000235743	protein_coding		18	1	64888048	2917
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000225261	protein_coding		18	1	64888929	747
ENSMUSG00000070547	protein_coding	Mrgprb1	ENSMUST00000094384	protein_coding	principal1	7	-1	48456342	4185
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000236929	processed_transcript		18	1	64888990	240
ENSMUSG00000040813	protein_coding	Tex264	ENSMUST00000046735	protein_coding	principal1	9	-1	106685915	1391
ENSMUSG00000025980	protein_coding	Hspd1	ENSMUST00000027123	protein_coding	principal1	1	-1	55088024	2423
ENSMUSG00000041623	protein_coding	D11Wsu47e	ENSMUST00000042227	protein_coding	principal1	11	1	113684412	2196
ENSMUSG00000070547	protein_coding	Mrgprb1	ENSMUST00000188095	protein_coding		7	-1	48456295	472
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000027289	nonsense_mediated_decay		1	1	37035708	3394
ENSMUSG00000057191	protein_coding	AB124611	ENSMUST00000173769	protein_coding	principal3	9	1	21526201	1188
ENSMUSG00000070547	protein_coding	Mrgprb1	ENSMUST00000188918	protein_coding		7	-1	48456246	435
ENSMUSG00000041623	protein_coding	D11Wsu47e	ENSMUST00000123466	protein_coding		11	1	113684440	794
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000033218	protein_coding		7	1	119794006	1966
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000194890	retained_intron		1	1	37100531	374
ENSMUSG00000041623	protein_coding	D11Wsu47e	ENSMUST00000106621	protein_coding	principal1	11	1	113684447	2062
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000194048	processed_transcript		1	1	37100668	665
ENSMUSG00000081799	processed_pseudogene	Gm14071	ENSMUST00000117817	processed_pseudogene		2	-1	139384340	509
ENSMUSG00000025980	protein_coding	Hspd1	ENSMUST00000127861	protein_coding		1	-1	55088243	863
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000195450	protein_coding		1	1	37135508	462
ENSMUSG00000025980	protein_coding	Hspd1	ENSMUST00000144077	protein_coding		1	-1	55088243	528
ENSMUSG00000029337	protein_coding	Fgf5	ENSMUST00000031280	protein_coding	principal1	5	1	98254184	2501
ENSMUSG00000041623	protein_coding	D11Wsu47e	ENSMUST00000153732	protein_coding		11	1	113685086	541
ENSMUSG00000074109	protein_coding	Mrgprx2	ENSMUST00000098433	protein_coding	principal1	7	-1	48499321	4610
ENSMUSG00000086453	antisense	Gm11457	ENSMUST00000124435	antisense		2	-1	164769619	490
ENSMUSG00000057191	protein_coding	AB124611	ENSMUST00000076326	nonsense_mediated_decay		9	1	21526228	1393
ENSMUSG00000086453	antisense	Gm11457	ENSMUST00000141843	antisense		2	-1	164769624	457
ENSMUSG00000024963	protein_coding	Dnajc4	ENSMUST00000025915	protein_coding	alternative2	19	-1	6992503	1074
ENSMUSG00000074109	protein_coding	Mrgprx2	ENSMUST00000186394	protein_coding		7	-1	48496125	1930
ENSMUSG00000029337	protein_coding	Fgf5	ENSMUST00000200059	protein_coding		5	1	98254412	600
ENSMUSG00000086453	antisense	Gm11457	ENSMUST00000146846	antisense		2	-1	164769666	676
ENSMUSG00000116557	lincRNA	4933432I09Rik	ENSMUST00000232008	lincRNA		16	-1	18213533	3257
ENSMUSG00000024963	protein_coding	Dnajc4	ENSMUST00000236113	processed_transcript		19	-1	6989808	311
ENSMUSG00000116557	lincRNA	4933432I09Rik	ENSMUST00000232501	lincRNA		16	-1	18213863	1362
ENSMUSG00000024963	protein_coding	Dnajc4	ENSMUST00000235444	retained_intron		19	-1	6992572	753
ENSMUSG00000116772	lincRNA	4930483P17Rik	ENSMUST00000231823	lincRNA		16	1	18213649	961
ENSMUSG00000118131	TEC	Gm50167	ENSMUST00000237741	TEC		18	-1	67151372	161
ENSMUSG00000047511	protein_coding	Olfr1396	ENSMUST00000060398	protein_coding	principal1	11	-1	49114874	3946
ENSMUSG00000050425	protein_coding	Mrgprb2	ENSMUST00000052730	protein_coding	principal1	7	-1	48558086	2077
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000063650	protein_coding	alternative2	4	-1	63495951	4016
ENSMUSG00000040813	protein_coding	Tex264	ENSMUST00000191205	processed_transcript		9	-1	106663957	1242
ENSMUSG00000047511	protein_coding	Olfr1396	ENSMUST00000215553	protein_coding	principal1	11	-1	49114874	4237
ENSMUSG00000024963	protein_coding	Dnajc4	ENSMUST00000235481	nonsense_mediated_decay		19	-1	6992272	517
ENSMUSG00000094189	processed_pseudogene	Gm6134	ENSMUST00000117265	processed_pseudogene		6	1	112976213	171
ENSMUSG00000055748	protein_coding	Gsdmc4	ENSMUST00000188108	protein_coding	principal1	15	-1	63912297	2085
ENSMUSG00000109901	protein_coding	Chmp1b	ENSMUST00000210564	protein_coding	principal1	18	1	67205366	2524
ENSMUSG00000040813	protein_coding	Tex264	ENSMUST00000185257	processed_transcript		9	-1	106685919	785
ENSMUSG00000024963	protein_coding	Dnajc4	ENSMUST00000179118	protein_coding	principal2	19	-1	6992272	840
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000194320	retained_intron		1	1	37186855	330
ENSMUSG00000047511	protein_coding	Olfr1396	ENSMUST00000203007	protein_coding	principal1	11	-1	49113757	981
ENSMUSG00000101362	unprocessed_pseudogene	Mrgprb9-ps	ENSMUST00000188739	unprocessed_pseudogene		7	1	48590802	892
ENSMUSG00000117982	TEC	Gm50170	ENSMUST00000236854	TEC		18	1	67122732	2594
ENSMUSG00000040813	protein_coding	Tex264	ENSMUST00000188892	processed_transcript		9	-1	106685927	822
ENSMUSG00000031737	protein_coding	Irx5	ENSMUST00000210246	protein_coding		8	1	92357625	2550
ENSMUSG00000108188	processed_pseudogene	Gm43865	ENSMUST00000204721	processed_pseudogene		6	-1	112991498	127
ENSMUSG00000047511	protein_coding	Olfr1396	ENSMUST00000109201	protein_coding	principal1	11	-1	49114874	1170
ENSMUSG00000040813	protein_coding	Tex264	ENSMUST00000214885	processed_transcript		9	-1	106685302	501
ENSMUSG00000050122	protein_coding	Vwa3b	ENSMUST00000169057	protein_coding		1	1	37153849	1499
ENSMUSG00000030996	protein_coding	Art1	ENSMUST00000033300	protein_coding	principal1	7	1	102101743	1425
ENSMUSG00000055748	protein_coding	Gsdmc4	ENSMUST00000063530	protein_coding	principal1	15	-1	63902936	1988
ENSMUSG00000108215	processed_pseudogene	Gm8083	ENSMUST00000203976	processed_pseudogene		6	1	112992122	475
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000106520	protein_coding	alternative2	7	1	119794010	2492
ENSMUSG00000040813	protein_coding	Tex264	ENSMUST00000188120	processed_transcript		9	-1	106685909	436
ENSMUSG00000090777	protein_coding	Ccdc188	ENSMUST00000231860	protein_coding		16	1	18217879	1330
ENSMUSG00000103603	antisense	Gm37020	ENSMUST00000195303	antisense		1	-1	37133264	992
ENSMUSG00000107455	TEC	Gm43868	ENSMUST00000205187	TEC		6	-1	113046148	2114
ENSMUSG00000040813	protein_coding	Tex264	ENSMUST00000190948	processed_transcript		9	-1	106685305	524
ENSMUSG00000040813	protein_coding	Tex264	ENSMUST00000185645	processed_transcript		9	-1	106685903	353
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000102867	protein_coding	alternative2	4	-1	63495951	4013
ENSMUSG00000100250	unprocessed_pseudogene	Gm18353	ENSMUST00000185906	unprocessed_pseudogene		7	-1	48610332	784
ENSMUSG00000090777	protein_coding	Ccdc188	ENSMUST00000231369	protein_coding	principal1	16	1	18217879	1588
ENSMUSG00000030996	protein_coding	Art1	ENSMUST00000210211	nonsense_mediated_decay		7	1	102101743	1227
ENSMUSG00000090777	protein_coding	Ccdc188	ENSMUST00000231965	nonsense_mediated_decay		16	1	18217879	1517
ENSMUSG00000069892	protein_coding	9930111J21Rik2	ENSMUST00000101295	protein_coding	principal1	11	-1	49051225	5985
ENSMUSG00000090777	protein_coding	Ccdc188	ENSMUST00000167061	protein_coding		16	1	18218170	747
ENSMUSG00000063145	protein_coding	Bbs5	ENSMUST00000074963	protein_coding	principal1	2	1	69647208	1468
ENSMUSG00000030996	protein_coding	Art1	ENSMUST00000209809	nonsense_mediated_decay		7	1	102101743	2341
ENSMUSG00000021795	protein_coding	Sftpd	ENSMUST00000077136	protein_coding	principal1	14	-1	41185149	1275
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000107393	protein_coding	alternative2	4	-1	63495951	4028
ENSMUSG00000087575	lincRNA	Gm12976	ENSMUST00000153817	lincRNA		4	1	129261965	412
ENSMUSG00000069892	protein_coding	9930111J21Rik2	ENSMUST00000093152	protein_coding		11	-1	49051242	2403
ENSMUSG00000026063	protein_coding	Pih1d3	ENSMUST00000027230	protein_coding	principal1	1	1	31222838	1451
ENSMUSG00000031737	protein_coding	Irx5	ENSMUST00000034184	protein_coding	principal1	8	1	92357749	2450
ENSMUSG00000024500	protein_coding	Ppp2r2b	ENSMUST00000117687	protein_coding	alternative1	18	-1	42899294	2271
ENSMUSG00000087575	lincRNA	Gm12976	ENSMUST00000150171	lincRNA		4	1	129263730	459
ENSMUSG00000021795	protein_coding	Sftpd	ENSMUST00000225892	retained_intron		14	-1	41183135	1809
ENSMUSG00000114927	processed_pseudogene	Gm47114	ENSMUST00000224939	processed_pseudogene		14	-1	41191653	253
ENSMUSG00000024500	protein_coding	Ppp2r2b	ENSMUST00000025377	protein_coding	principal2	18	-1	43059471	2031
ENSMUSG00000092055	unprocessed_pseudogene	Gm7925	ENSMUST00000166690	unprocessed_pseudogene		14	-1	41221651	401
ENSMUSG00000069892	protein_coding	9930111J21Rik2	ENSMUST00000132768	protein_coding		11	-1	49051122	638
ENSMUSG00000091110	protein_coding	Gm2832	ENSMUST00000172412	protein_coding	principal1	14	1	41278805	1760
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000076894	protein_coding	principal1	1	1	159232326	5116
ENSMUSG00000091808	unprocessed_pseudogene	Gm9671	ENSMUST00000171502	unprocessed_pseudogene		14	-1	41309643	547
ENSMUSG00000024500	protein_coding	Ppp2r2b	ENSMUST00000120632	protein_coding	alternative1	18	-1	42899643	2081
ENSMUSG00000024500	protein_coding	Ppp2r2b	ENSMUST00000239360	protein_coding	alternative1	18	-1	43083127	1506
ENSMUSG00000024500	protein_coding	Ppp2r2b	ENSMUST00000236238	protein_coding		18	-1	42899449	723
ENSMUSG00000063145	protein_coding	Bbs5	ENSMUST00000134659	nonsense_mediated_decay		2	1	69647171	1124
ENSMUSG00000085134	antisense	Gm11659	ENSMUST00000137561	antisense		11	-1	104259361	466
ENSMUSG00000063145	protein_coding	Bbs5	ENSMUST00000112286	protein_coding		2	1	69647216	1397
ENSMUSG00000020733	protein_coding	Slc9a3r1	ENSMUST00000021077	protein_coding	principal1	11	1	115163341	1925
ENSMUSG00000043822	protein_coding	Adamtsl5	ENSMUST00000137571	processed_transcript		10	-1	80340085	471
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000133758	nonsense_mediated_decay		7	1	119794119	2019
ENSMUSG00000063145	protein_coding	Bbs5	ENSMUST00000149276	retained_intron		2	1	69647230	683
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000192215	protein_coding		1	1	159232648	1040
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000137015	retained_intron		7	1	119794151	2010
ENSMUSG00000024500	protein_coding	Ppp2r2b	ENSMUST00000153737	protein_coding		18	-1	42938232	528
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000207042	protein_coding		7	1	119823876	503
ENSMUSG00000048852	protein_coding	Gm12185	ENSMUST00000094476	protein_coding	principal1	11	-1	48927159	5264
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000129269	protein_coding	principal1	9	1	100643448	6186
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000084510	protein_coding	principal4	4	-1	63495951	4049
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000149132	processed_transcript		7	1	119824100	327
ENSMUSG00000024500	protein_coding	Ppp2r2b	ENSMUST00000155262	processed_transcript		18	-1	42898815	323
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000155938	retained_intron		7	1	119825551	796
ENSMUSG00000063145	protein_coding	Bbs5	ENSMUST00000144240	retained_intron		2	1	69647253	425
ENSMUSG00000048852	protein_coding	Gm12185	ENSMUST00000129318	processed_transcript		11	-1	48927179	333
ENSMUSG00000084959	antisense	4933407I08Rik	ENSMUST00000151215	antisense		18	1	42935470	1294
ENSMUSG00000048188	processed_pseudogene	Gm8181	ENSMUST00000062242	processed_pseudogene		18	1	43171159	666
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000138689	processed_transcript		7	1	119834357	237
ENSMUSG00000028618	protein_coding	Tmem59	ENSMUST00000030361	protein_coding	principal1	4	1	107178399	1775
ENSMUSG00000063145	protein_coding	Bbs5	ENSMUST00000130061	retained_intron		2	1	69647263	474
ENSMUSG00000048852	protein_coding	Gm12185	ENSMUST00000059930	protein_coding	principal1	11	-1	48992226	5252
ENSMUSG00000063145	protein_coding	Bbs5	ENSMUST00000143165	retained_intron		2	1	69655424	508
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000195554	nonsense_mediated_decay		1	1	159232690	545
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000208789	nonsense_mediated_decay		7	1	119843865	527
ENSMUSG00000063145	protein_coding	Bbs5	ENSMUST00000127806	protein_coding		2	1	69656989	643
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000216652	protein_coding		7	1	112349394	2681
ENSMUSG00000028618	protein_coding	Tmem59	ENSMUST00000128123	protein_coding		4	1	107178527	583
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000143816	retained_intron		9	1	100643600	2022
ENSMUSG00000082116	processed_pseudogene	Gm12188	ENSMUST00000117387	processed_pseudogene		11	-1	49088543	310
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000151248	retained_intron		7	1	119844206	295
ENSMUSG00000083178	unprocessed_pseudogene	Gm12187	ENSMUST00000119584	unprocessed_pseudogene		11	-1	49071070	1375
ENSMUSG00000028618	protein_coding	Tmem59	ENSMUST00000106753	protein_coding		4	1	107178527	1148
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000194049	retained_intron		1	1	159239561	655
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000192762	protein_coding		1	1	159249248	680
ENSMUSG00000030924	protein_coding	Rexo5	ENSMUST00000084644	protein_coding	principal2	7	1	119794130	2008
ENSMUSG00000026546	protein_coding	Cfap45	ENSMUST00000085894	protein_coding	principal1	1	1	172521044	1908
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000123315	retained_intron		9	1	100643613	588
ENSMUSG00000063931	protein_coding	Pepd	ENSMUST00000075068	protein_coding	principal1	7	1	34912379	1881
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000144005	retained_intron		9	1	100643613	558
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000195044	protein_coding		1	1	159258668	745
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000041418	protein_coding		9	1	100643613	5909
ENSMUSG00000078153	protein_coding	Psme2b	ENSMUST00000104958	protein_coding	principal1	11	-1	48946190	837
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000051308	protein_coding		7	1	112368308	2399
ENSMUSG00000026546	protein_coding	Cfap45	ENSMUST00000160531	retained_intron		1	1	172521136	661
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000194713	retained_intron		1	1	159266734	6999
ENSMUSG00000063931	protein_coding	Pepd	ENSMUST00000161900	nonsense_mediated_decay		7	1	34945589	383
ENSMUSG00000028618	protein_coding	Tmem59	ENSMUST00000141013	retained_intron		4	1	107178667	808
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000033033	protein_coding		7	1	112374345	2259
ENSMUSG00000026546	protein_coding	Cfap45	ENSMUST00000161140	protein_coding		1	1	172521139	426
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000138405	nonsense_mediated_decay		9	1	100643616	2637
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000193776	retained_intron		1	1	159306637	392
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000106645	protein_coding		7	1	112374868	2309
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000192044	protein_coding		1	1	159306648	464
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000155108	nonsense_mediated_decay		9	1	100643636	1793
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000213108	protein_coding		7	1	112381149	1833
ENSMUSG00000070424	protein_coding	Art5	ENSMUST00000094128	protein_coding	principal1	7	-1	102102845	1518
ENSMUSG00000063931	protein_coding	Pepd	ENSMUST00000161128	retained_intron		7	1	34969283	705
ENSMUSG00000022091	protein_coding	Sorbs3	ENSMUST00000227653	protein_coding	alternative2	14	-1	70206022	3061
ENSMUSG00000003644	protein_coding	Rps6ka1	ENSMUST00000105894	protein_coding	principal3	4	-1	133887797	3135
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000194798	retained_intron		1	1	159308435	473
ENSMUSG00000038244	protein_coding	Mical2	ENSMUST00000140202	retained_intron		7	1	112407108	877
ENSMUSG00000069893	protein_coding	9930111J21Rik1	ENSMUST00000097494	protein_coding	principal1	11	-1	48979381	3863
ENSMUSG00000063931	protein_coding	Pepd	ENSMUST00000162509	retained_intron		7	1	34969510	408
ENSMUSG00000028618	protein_coding	Tmem59	ENSMUST00000154007	nonsense_mediated_decay		4	1	107178726	852
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000192597	retained_intron		1	1	159320994	4961
ENSMUSG00000028618	protein_coding	Tmem59	ENSMUST00000127652	processed_transcript		4	1	107179018	1332
ENSMUSG00000026546	protein_coding	Cfap45	ENSMUST00000162988	protein_coding		1	1	172521181	638
ENSMUSG00000040782	protein_coding	Cop1	ENSMUST00000192841	retained_intron		1	1	159342356	776
ENSMUSG00000069893	protein_coding	9930111J21Rik1	ENSMUST00000093153	protein_coding		11	-1	48979398	2403
ENSMUSG00000103186	TEC	Gm37088	ENSMUST00000193887	TEC		1	-1	159337819	406
ENSMUSG00000026546	protein_coding	Cfap45	ENSMUST00000159792	protein_coding		1	1	172526049	699
ENSMUSG00000063931	protein_coding	Pepd	ENSMUST00000160320	retained_intron		7	1	35040482	1043
ENSMUSG00000022091	protein_coding	Sorbs3	ENSMUST00000022682	protein_coding	principal2	14	-1	70207637	2914
ENSMUSG00000103572	TEC	Gm37115	ENSMUST00000193750	TEC		1	1	159235710	2849
ENSMUSG00000026546	protein_coding	Cfap45	ENSMUST00000159395	protein_coding		1	1	172526410	814
ENSMUSG00000069893	protein_coding	9930111J21Rik1	ENSMUST00000141200	protein_coding		11	-1	48979278	638
ENSMUSG00000026974	protein_coding	Zmynd19	ENSMUST00000028350	protein_coding	principal1	2	1	24949792	3903
ENSMUSG00000084153	processed_pseudogene	Gm12186	ENSMUST00000119050	processed_pseudogene		11	-1	48997713	945
ENSMUSG00000003644	protein_coding	Rps6ka1	ENSMUST00000168974	protein_coding	alternative1	4	-1	133874731	2982
ENSMUSG00000063931	protein_coding	Pepd	ENSMUST00000160459	retained_intron		7	1	35043190	996
ENSMUSG00000085304	antisense	Gm12802	ENSMUST00000145510	antisense		4	1	107126613	1813
ENSMUSG00000048832	protein_coding	Vps37c	ENSMUST00000237240	protein_coding		19	1	10688735	2355
ENSMUSG00000081683	protein_coding	Fzd10	ENSMUST00000117102	protein_coding	principal1	5	1	128600844	3250
ENSMUSG00000070424	protein_coding	Art5	ENSMUST00000106937	protein_coding	principal1	7	-1	102100229	1713
ENSMUSG00000026546	protein_coding	Cfap45	ENSMUST00000160303	protein_coding		1	1	172537617	343
ENSMUSG00000080884	unprocessed_pseudogene	Cyp2j7-ps3	ENSMUST00000121405	unprocessed_pseudogene		4	-1	96151858	206
ENSMUSG00000022091	protein_coding	Sorbs3	ENSMUST00000227259	protein_coding	alternative2	14	-1	70204623	2481
ENSMUSG00000003644	protein_coding	Rps6ka1	ENSMUST00000003741	protein_coding		4	-1	133887784	3085
ENSMUSG00000083801	unprocessed_pseudogene	Cyp2j7-ps2	ENSMUST00000119189	unprocessed_pseudogene		4	-1	96170385	179
ENSMUSG00000009291	protein_coding	Pttg1ip	ENSMUST00000009435	protein_coding	principal2	10	1	77581720	2294
ENSMUSG00000115708	TEC	Gm49187	ENSMUST00000227154	TEC		15	1	21958432	1380
ENSMUSG00000022091	protein_coding	Sorbs3	ENSMUST00000227929	protein_coding		14	-1	70211989	2460
ENSMUSG00000117205	processed_pseudogene	Gm29711	ENSMUST00000233704	processed_pseudogene		17	1	9102678	455
ENSMUSG00000003644	protein_coding	Rps6ka1	ENSMUST00000157067	protein_coding		4	-1	133872313	2637
ENSMUSG00000085184	processed_transcript	4933439K11Rik	ENSMUST00000132370	lincRNA		1	-1	172550669	599
ENSMUSG00000026974	protein_coding	Zmynd19	ENSMUST00000148042	protein_coding		2	1	24950210	1103
ENSMUSG00000115645	processed_pseudogene	Gm49288	ENSMUST00000227159	processed_pseudogene		14	-1	70237569	285
ENSMUSG00000070424	protein_coding	Art5	ENSMUST00000106935	protein_coding		7	-1	102099493	495
ENSMUSG00000085184	processed_transcript	4933439K11Rik	ENSMUST00000140307	lincRNA		1	-1	172550806	941
ENSMUSG00000097049	lincRNA	6530411M01Rik	ENSMUST00000181618	lincRNA		17	-1	9167836	1033
ENSMUSG00000003644	protein_coding	Rps6ka1	ENSMUST00000174481	protein_coding		4	-1	133886283	2228
ENSMUSG00000085184	processed_transcript	4933439K11Rik	ENSMUST00000169111	antisense		1	-1	172558129	1869
ENSMUSG00000009291	protein_coding	Pttg1ip	ENSMUST00000218797	retained_intron		10	1	77581723	818
ENSMUSG00000117026	lincRNA	C87487	ENSMUST00000233443	lincRNA		17	1	9189126	794
ENSMUSG00000020439	protein_coding	Smtn	ENSMUST00000020718	protein_coding		11	-1	3527937	1747
ENSMUSG00000009291	protein_coding	Pttg1ip	ENSMUST00000159116	retained_intron		10	1	77581756	351
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000123302	nonsense_mediated_decay		9	1	100643768	4800
ENSMUSG00000117026	lincRNA	C87487	ENSMUST00000233515	lincRNA		17	1	9189147	612
ENSMUSG00000070424	protein_coding	Art5	ENSMUST00000106934	protein_coding		7	-1	102099939	843
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000133388	protein_coding		9	1	100643770	583
ENSMUSG00000117133	TEC	Gm49806	ENSMUST00000233025	TEC		17	1	9246550	1999
ENSMUSG00000078921	protein_coding	Tgtp2	ENSMUST00000046745	protein_coding	principal1	11	-1	49064204	2810
ENSMUSG00000117706	processed_pseudogene	Gm50184	ENSMUST00000237236	processed_pseudogene		19	-1	42379101	111
ENSMUSG00000070424	protein_coding	Art5	ENSMUST00000211553	processed_transcript		7	-1	102109489	291
ENSMUSG00000003644	protein_coding	Rps6ka1	ENSMUST00000137486	protein_coding		4	-1	133873039	2296
ENSMUSG00000024402	protein_coding	Lta	ENSMUST00000025266	protein_coding	principal1	17	-1	35205351	1383
ENSMUSG00000017299	protein_coding	Dnttip1	ENSMUST00000017443	protein_coding	principal1	2	1	164745983	1664
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000149771	processed_transcript		9	1	100796704	3857
ENSMUSG00000117728	antisense	Gm34299	ENSMUST00000235253	antisense		19	1	42410394	1574
ENSMUSG00000078921	protein_coding	Tgtp2	ENSMUST00000128411	processed_transcript		11	-1	49064206	370
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000143150	retained_intron		9	1	100834474	692
ENSMUSG00000009291	protein_coding	Pttg1ip	ENSMUST00000161789	nonsense_mediated_decay		10	1	77581758	565
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000146934	protein_coding		9	1	100845050	2885
ENSMUSG00000017299	protein_coding	Dnttip1	ENSMUST00000109326	protein_coding		2	1	164746014	476
ENSMUSG00000003644	protein_coding	Rps6ka1	ENSMUST00000173989	retained_intron		4	-1	133860930	864
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000122824	retained_intron		9	1	100848161	596
ENSMUSG00000017299	protein_coding	Dnttip1	ENSMUST00000109327	protein_coding		2	1	164746031	656
ENSMUSG00000108120	TEC	9930120I10Rik	ENSMUST00000203027	TEC		6	-1	87806336	865
ENSMUSG00000003644	protein_coding	Rps6ka1	ENSMUST00000129636	retained_intron		4	-1	133861042	363
ENSMUSG00000009291	protein_coding	Pttg1ip	ENSMUST00000162429	protein_coding	alternative2	10	1	77581803	652
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000143955	protein_coding		9	1	100889608	853
ENSMUSG00000108042	TEC	B130021K23Rik	ENSMUST00000205226	TEC		6	-1	87832866	2593
ENSMUSG00000043822	protein_coding	Adamtsl5	ENSMUST00000124789	retained_intron		10	-1	80348412	3520
ENSMUSG00000037286	protein_coding	Stag1	ENSMUST00000191345	retained_intron		9	1	100955769	3607
ENSMUSG00000084839	antisense	Gm14097	ENSMUST00000147868	antisense		2	-1	132698523	470
ENSMUSG00000003644	protein_coding	Rps6ka1	ENSMUST00000173961	processed_transcript		4	-1	133887574	228
ENSMUSG00000017299	protein_coding	Dnttip1	ENSMUST00000135458	retained_intron		2	1	164754139	560
ENSMUSG00000009291	protein_coding	Pttg1ip	ENSMUST00000162598	nonsense_mediated_decay		10	1	77581822	414
ENSMUSG00000040661	protein_coding	Rad54l2	ENSMUST00000046502	protein_coding	principal1	9	-1	106789194	9305
ENSMUSG00000079620	protein_coding	Muc4	ENSMUST00000132475	protein_coding		16	1	32735886	1190
ENSMUSG00000103624	TEC	Gm3081	ENSMUST00000193413	TEC		9	1	100877091	3025
ENSMUSG00000043822	protein_coding	Adamtsl5	ENSMUST00000128845	retained_intron		10	-1	80346119	4104
ENSMUSG00000104272	TEC	Gm38297	ENSMUST00000195122	TEC		9	1	100703213	1057
ENSMUSG00000026748	protein_coding	Plxdc2	ENSMUST00000028081	protein_coding	principal2	2	1	16356304	6947
ENSMUSG00000018199	protein_coding	Ro60	ENSMUST00000159879	protein_coding	principal1	1	-1	143777068	8738
ENSMUSG00000009291	protein_coding	Pttg1ip	ENSMUST00000162943	protein_coding	alternative2	10	1	77582409	721
ENSMUSG00000078920	protein_coding	Ifi47	ENSMUST00000109202	protein_coding	principal1	11	1	49076587	1773
ENSMUSG00000107928	protein_coding	Gm45140	ENSMUST00000204419	nonsense_mediated_decay	principal5	6	-1	87835795	5061
ENSMUSG00000040661	protein_coding	Rad54l2	ENSMUST00000189553	protein_coding		9	-1	106693305	593
ENSMUSG00000090097	protein_coding	Olfr1182	ENSMUST00000179450	protein_coding	principal1	2	-1	88449121	4383
ENSMUSG00000086225	processed_pseudogene	Gm8661	ENSMUST00000118688	processed_pseudogene		9	-1	100625965	992
ENSMUSG00000009291	protein_coding	Pttg1ip	ENSMUST00000161165	protein_coding		10	1	77583945	395
ENSMUSG00000078920	protein_coding	Ifi47	ENSMUST00000152914	protein_coding		11	1	49086700	703
ENSMUSG00000103657	TEC	Gm37204	ENSMUST00000192389	TEC		9	1	100665839	3961
ENSMUSG00000040661	protein_coding	Rad54l2	ENSMUST00000190363	protein_coding		9	-1	106722871	458
ENSMUSG00000089965	processed_pseudogene	Gm16236	ENSMUST00000159588	processed_pseudogene		1	-1	71040030	379
ENSMUSG00000043822	protein_coding	Adamtsl5	ENSMUST00000137576	retained_intron		10	-1	80348412	2464
ENSMUSG00000107928	protein_coding	Gm45140	ENSMUST00000204169	protein_coding	alternative2	6	-1	87821631	790
ENSMUSG00000103374	processed_pseudogene	Gm37239	ENSMUST00000193510	processed_pseudogene		1	1	189685328	141
ENSMUSG00000078920	protein_coding	Ifi47	ENSMUST00000214804	protein_coding		11	1	49087068	737
ENSMUSG00000026748	protein_coding	Plxdc2	ENSMUST00000114702	protein_coding	alternative1	2	1	16357117	2146
ENSMUSG00000116518	processed_transcript	Gm49494	ENSMUST00000230732	retained_intron		15	1	99875540	1082
ENSMUSG00000040661	protein_coding	Rad54l2	ENSMUST00000191300	retained_intron		9	-1	106789176	2418
ENSMUSG00000026748	protein_coding	Plxdc2	ENSMUST00000114703	protein_coding		2	1	16356887	2061
ENSMUSG00000078920	protein_coding	Ifi47	ENSMUST00000213728	protein_coding	principal1	11	1	49088264	1678
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000168413	retained_intron		14	1	51884876	1844
ENSMUSG00000090097	protein_coding	Olfr1182	ENSMUST00000126038	protein_coding	principal1	2	-1	88449131	4460
ENSMUSG00000018199	protein_coding	Ro60	ENSMUST00000018343	retained_intron		1	-1	143771026	4335
ENSMUSG00000039092	protein_coding	Sptlc3	ENSMUST00000110083	protein_coding	principal1	2	1	139493913	2227
ENSMUSG00000116518	processed_transcript	Gm49494	ENSMUST00000228976	bidirectional_promoter_lncRNA		15	1	99875579	440
ENSMUSG00000009291	protein_coding	Pttg1ip	ENSMUST00000162895	retained_intron		10	1	77589394	773
ENSMUSG00000048832	protein_coding	Vps37c	ENSMUST00000235927	protein_coding	principal1	19	1	10688751	2690
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000168217	nonsense_mediated_decay		14	1	51884878	809
ENSMUSG00000026748	protein_coding	Plxdc2	ENSMUST00000126173	processed_transcript		2	1	16638696	1259
ENSMUSG00000009291	protein_coding	Pttg1ip	ENSMUST00000167006	retained_intron		10	1	77592337	831
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000095038	protein_coding		4	-1	63495951	2665
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000119294	protein_coding		4	-1	63495951	2632
ENSMUSG00000078920	protein_coding	Ifi47	ENSMUST00000046704	protein_coding	principal1	11	1	49087039	1690
ENSMUSG00000048832	protein_coding	Vps37c	ENSMUST00000087951	protein_coding	principal1	19	1	10688751	2686
ENSMUSG00000094925	protein_coding	Gm5798	ENSMUST00000164613	protein_coding	principal1	14	1	41348609	1751
ENSMUSG00000094925	protein_coding	Gm5798	ENSMUST00000179987	protein_coding		14	1	41348635	582
ENSMUSG00000093537	processed_pseudogene	Gm7584	ENSMUST00000175829	processed_pseudogene		10	1	17817379	940
ENSMUSG00000091847	unprocessed_pseudogene	Gm2855	ENSMUST00000166765	unprocessed_pseudogene		14	-1	41372374	456
ENSMUSG00000039092	protein_coding	Sptlc3	ENSMUST00000047370	protein_coding	principal1	2	1	139493920	2759
ENSMUSG00000048832	protein_coding	Vps37c	ENSMUST00000237437	protein_coding		19	1	10688763	452
ENSMUSG00000093672	antisense	Gm20655	ENSMUST00000181428	antisense		10	-1	17795328	2946
ENSMUSG00000048832	protein_coding	Vps37c	ENSMUST00000235921	protein_coding		19	1	10688765	2602
ENSMUSG00000093672	antisense	Gm20655	ENSMUST00000176132	antisense		10	-1	17799921	473
ENSMUSG00000091131	protein_coding	Gm7945	ENSMUST00000164948	protein_coding	principal1	14	-1	41386379	1428
ENSMUSG00000085071	processed_transcript	Gm14066	ENSMUST00000134801	processed_transcript		2	-1	139677714	2057
ENSMUSG00000049598	protein_coding	Vsig8	ENSMUST00000061835	protein_coding	principal1	1	1	172555938	1801
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000165100	nonsense_mediated_decay		14	1	51884889	1430
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000163603	retained_intron		14	1	51884889	1513
ENSMUSG00000039891	protein_coding	Txlnb	ENSMUST00000175676	retained_intron		10	1	17796226	1786
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000164252	nonsense_mediated_decay		14	1	51884889	1426
ENSMUSG00000092142	protein_coding	Gm6482	ENSMUST00000168128	protein_coding	principal1	14	-1	41408281	1410
ENSMUSG00000022092	protein_coding	Ppp3cc	ENSMUST00000228911	protein_coding	alternative2	14	-1	70289277	1836
ENSMUSG00000091486	unprocessed_pseudogene	Gm7953	ENSMUST00000168278	unprocessed_pseudogene		14	-1	41439018	469
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000095037	protein_coding		4	-1	63495951	2419
ENSMUSG00000057816	protein_coding	Cfap299	ENSMUST00000080333	protein_coding	principal1	5	1	98329304	861
ENSMUSG00000049598	protein_coding	Vsig8	ENSMUST00000177086	protein_coding		1	1	172559906	1519
ENSMUSG00000067642	protein_coding	Adgrf3	ENSMUST00000088117	protein_coding	principal1	5	-1	30205722	3099
ENSMUSG00000022092	protein_coding	Ppp3cc	ENSMUST00000078434	protein_coding	principal2	14	-1	70289471	1970
ENSMUSG00000078922	protein_coding	Tgtp1	ENSMUST00000068063	protein_coding	principal1	11	-1	48992258	2823
ENSMUSG00000057816	protein_coding	Cfap299	ENSMUST00000197724	processed_transcript		5	1	98329351	214
ENSMUSG00000095741	protein_coding	Rhox2f	ENSMUST00000115173	protein_coding	principal1	X	1	37571405	799
ENSMUSG00000057816	protein_coding	Cfap299	ENSMUST00000197812	processed_transcript		5	1	98329356	548
ENSMUSG00000067642	protein_coding	Adgrf3	ENSMUST00000125367	protein_coding		5	-1	30196418	426
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000145630	nonsense_mediated_decay		4	-1	63431929	323
ENSMUSG00000044991	protein_coding	Shld1	ENSMUST00000061891	protein_coding	principal1	2	1	132686931	1076
ENSMUSG00000118463	unitary_pseudogene	Gm9730	ENSMUST00000238737	unitary_pseudogene		X	-1	73584123	421
ENSMUSG00000067642	protein_coding	Adgrf3	ENSMUST00000135322	processed_transcript		5	-1	30204587	716
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000169019	retained_intron		14	1	51884912	890
ENSMUSG00000083341	processed_pseudogene	Gm14238	ENSMUST00000120227	processed_pseudogene		2	-1	155486369	323
ENSMUSG00000057816	protein_coding	Cfap299	ENSMUST00000196339	nonsense_mediated_decay		5	1	98329370	1018
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000148957	processed_transcript		4	-1	63432002	510
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000063672	protein_coding		4	-1	63495991	2804
ENSMUSG00000067101	lincRNA	1700010H22Rik	ENSMUST00000189748	lincRNA		5	-1	98566926	905
ENSMUSG00000118549	unprocessed_pseudogene	AC114824.1	ENSMUST00000239022	unprocessed_pseudogene		17	1	49927639	1391
ENSMUSG00000095741	protein_coding	Rhox2f	ENSMUST00000184546	protein_coding		X	1	37571829	488
ENSMUSG00000044991	protein_coding	Shld1	ENSMUST00000148271	protein_coding		2	1	132690157	545
ENSMUSG00000022092	protein_coding	Ppp3cc	ENSMUST00000228265	processed_transcript		14	-1	70289450	2494
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000153307	retained_intron		4	-1	63461302	783
ENSMUSG00000078922	protein_coding	Tgtp1	ENSMUST00000146439	protein_coding		11	-1	48994172	764
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000170887	retained_intron		14	1	51884918	531
ENSMUSG00000118535	unitary_pseudogene	AC133946.1	ENSMUST00000239097	unitary_pseudogene		17	1	49972827	414
ENSMUSG00000067101	lincRNA	1700010H22Rik	ENSMUST00000187592	lincRNA		5	-1	98567004	1003
ENSMUSG00000067101	lincRNA	1700010H22Rik	ENSMUST00000086912	lincRNA		5	-1	98566762	378
ENSMUSG00000104545	TEC	E030032P16Rik	ENSMUST00000198813	TEC		5	1	98346394	2931
ENSMUSG00000078922	protein_coding	Tgtp1	ENSMUST00000132745	protein_coding		11	-1	48992890	373
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000166408	retained_intron		14	1	51884935	3404
ENSMUSG00000044991	protein_coding	Shld1	ENSMUST00000110132	protein_coding	principal1	2	1	132690283	1471
ENSMUSG00000106273	processed_pseudogene	Gm43767	ENSMUST00000198933	processed_pseudogene		5	1	98453747	381
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000144965	protein_coding		4	-1	63472740	590
ENSMUSG00000030055	protein_coding	Rab43	ENSMUST00000078647	protein_coding	principal1	6	-1	87811779	4605
ENSMUSG00000110290	lincRNA	Gm45336	ENSMUST00000210010	lincRNA		8	1	92465767	3230
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000164801	retained_intron		14	1	51884938	796
ENSMUSG00000058070	protein_coding	Eml1	ENSMUST00000054955	protein_coding	alternative2	12	1	108410542	3879
ENSMUSG00000044991	protein_coding	Shld1	ENSMUST00000141460	processed_transcript		2	1	132698119	893
ENSMUSG00000047356	protein_coding	Lcn10	ENSMUST00000058912	protein_coding	principal1	2	1	25682726	1106
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000164902	protein_coding	alternative2	14	1	51884946	1461
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000133425	protein_coding		4	-1	63494759	797
ENSMUSG00000030055	protein_coding	Rab43	ENSMUST00000204923	processed_transcript		6	-1	87790075	323
ENSMUSG00000039137	protein_coding	Whrn	ENSMUST00000140720	retained_intron		4	-1	63494677	872
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000165150	retained_intron		14	1	51884952	703
ENSMUSG00000058070	protein_coding	Eml1	ENSMUST00000109857	protein_coding	alternative2	12	1	108410662	2627
ENSMUSG00000079620	protein_coding	Muc4	ENSMUST00000142355	processed_transcript		16	1	32736197	10805
ENSMUSG00000117567	lincRNA	Gm50056	ENSMUST00000234252	lincRNA		17	-1	88664753	1315
ENSMUSG00000115096	antisense	Gm48940	ENSMUST00000228016	antisense		14	1	49299836	669
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000168409	retained_intron		14	1	51884954	582
ENSMUSG00000117567	lincRNA	Gm50056	ENSMUST00000234688	lincRNA		17	-1	88664765	866
ENSMUSG00000021852	protein_coding	Slc35f4	ENSMUST00000227634	retained_intron		14	-1	49299273	755
ENSMUSG00000093702	unprocessed_pseudogene	Vmn1r-ps20	ENSMUST00000176809	unprocessed_pseudogene		6	-1	58407327	915
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000167984	protein_coding		14	1	51885141	197
ENSMUSG00000026196	protein_coding	Bard1	ENSMUST00000027393	protein_coding	principal1	1	-1	71103146	5659
ENSMUSG00000095802	unprocessed_pseudogene	Gm7415	ENSMUST00000178205	unprocessed_pseudogene		X	1	29128146	639
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000165568	protein_coding		14	1	51885402	840
ENSMUSG00000081224	unprocessed_pseudogene	Gm2066	ENSMUST00000118046	unprocessed_pseudogene		X	-1	29379787	389
ENSMUSG00000004561	protein_coding	Mettl17	ENSMUST00000077846	retained_intron		14	1	51887179	472
ENSMUSG00000033855	protein_coding	Ston1	ENSMUST00000137138	protein_coding		17	1	88597684	767
ENSMUSG00000003421	protein_coding	Nosip	ENSMUST00000107829	protein_coding	alternative2	7	1	45062429	972
ENSMUSG00000033855	protein_coding	Ston1	ENSMUST00000153613	processed_transcript		17	1	88597696	357
ENSMUSG00000072572	protein_coding	Slc39a2	ENSMUST00000160668	retained_intron		14	1	51892889	2508
ENSMUSG00000022895	protein_coding	Ets2	ENSMUST00000023612	protein_coding	principal1	16	1	95702075	3890
ENSMUSG00000035000	protein_coding	Dpp4	ENSMUST00000047812	protein_coding	principal1	2	-1	62412231	5268
ENSMUSG00000096856	protein_coding	Gm10778	ENSMUST00000189672	protein_coding	principal1	10	1	81649059	4735
ENSMUSG00000096856	protein_coding	Gm10778	ENSMUST00000105315	protein_coding		10	1	81661998	1497
ENSMUSG00000030055	protein_coding	Rab43	ENSMUST00000203294	processed_transcript		6	-1	87809757	1665
ENSMUSG00000040328	protein_coding	Olfr56	ENSMUST00000102785	protein_coding		11	1	49050733	1930
ENSMUSG00000043822	protein_coding	Adamtsl5	ENSMUST00000095446	protein_coding	principal1	10	-1	80348412	1957
ENSMUSG00000035000	protein_coding	Dpp4	ENSMUST00000156871	retained_intron		2	-1	62345146	288
ENSMUSG00000030055	protein_coding	Rab43	ENSMUST00000125377	processed_transcript		6	-1	87812164	912
ENSMUSG00000040328	protein_coding	Olfr56	ENSMUST00000203412	retained_intron		11	1	49087034	2767
ENSMUSG00000058070	protein_coding	Eml1	ENSMUST00000109860	protein_coding	principal4	12	1	108422816	4160
ENSMUSG00000035000	protein_coding	Dpp4	ENSMUST00000129738	processed_transcript		2	-1	62357707	617
ENSMUSG00000022895	protein_coding	Ets2	ENSMUST00000233908	retained_intron		16	1	95702455	654
ENSMUSG00000030055	protein_coding	Rab43	ENSMUST00000123216	processed_transcript		6	-1	87812098	325
ENSMUSG00000031383	protein_coding	Dusp9	ENSMUST00000019701	protein_coding	principal1	X	1	73639419	2722
ENSMUSG00000081650	protein_coding	Gm16181	ENSMUST00000118793	protein_coding	principal1	17	1	35220834	567
ENSMUSG00000030055	protein_coding	Rab43	ENSMUST00000032135	protein_coding		6	-1	87811779	1262
ENSMUSG00000091669	processed_pseudogene	Gm17117	ENSMUST00000163665	processed_pseudogene		9	1	107115074	299
ENSMUSG00000043822	protein_coding	Adamtsl5	ENSMUST00000138705	processed_transcript		10	-1	80345238	343
ENSMUSG00000072572	protein_coding	Slc39a2	ENSMUST00000047726	protein_coding	principal1	14	1	51893610	2334
ENSMUSG00000030055	protein_coding	Rab43	ENSMUST00000032134	protein_coding		6	-1	87809754	4308
ENSMUSG00000035000	protein_coding	Dpp4	ENSMUST00000150979	retained_intron		2	-1	62378248	666
ENSMUSG00000058070	protein_coding	Eml1	ENSMUST00000130999	nonsense_mediated_decay		12	1	108423078	2493
ENSMUSG00000043822	protein_coding	Adamtsl5	ENSMUST00000105352	protein_coding		10	-1	80348412	989
ENSMUSG00000003421	protein_coding	Nosip	ENSMUST00000003513	protein_coding	principal3	7	1	45062456	1814
ENSMUSG00000040328	protein_coding	Olfr56	ENSMUST00000203810	protein_coding	principal1	11	1	49087052	1990
ENSMUSG00000033855	protein_coding	Ston1	ENSMUST00000064035	protein_coding	principal1	17	1	88626555	3287
ENSMUSG00000107702	bidirectional_promoter_lncRNA	Gm44140	ENSMUST00000204157	bidirectional_promoter_lncRNA		6	-1	136519031	675
ENSMUSG00000033855	protein_coding	Ston1	ENSMUST00000150023	protein_coding	principal1	17	1	88626609	3231
ENSMUSG00000035000	protein_coding	Dpp4	ENSMUST00000149306	retained_intron		2	-1	62412021	1012
ENSMUSG00000040328	protein_coding	Olfr56	ENSMUST00000203149	protein_coding	principal1	11	1	49087052	1808
ENSMUSG00000022895	protein_coding	Ets2	ENSMUST00000233499	retained_intron		16	1	95702500	928
ENSMUSG00000035000	protein_coding	Dpp4	ENSMUST00000151818	processed_transcript		2	-1	62411859	315
ENSMUSG00000033855	protein_coding	Ston1	ENSMUST00000132384	retained_intron		17	1	88626833	2445
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000203988	protein_coding		6	1	136506167	453
ENSMUSG00000040328	protein_coding	Olfr56	ENSMUST00000238881	protein_coding	principal1	11	1	49130144	1551
ENSMUSG00000022895	protein_coding	Ets2	ENSMUST00000232792	protein_coding		16	1	95706339	929
ENSMUSG00000040328	protein_coding	Olfr56	ENSMUST00000239127	protein_coding		11	1	49130144	1503
ENSMUSG00000079620	protein_coding	Muc4	ENSMUST00000135753	protein_coding		16	1	32756336	4575
ENSMUSG00000087518	antisense	Gm13561	ENSMUST00000136879	antisense		2	1	62357071	1826
ENSMUSG00000033855	protein_coding	Ston1	ENSMUST00000112216	retained_intron		17	1	88627364	2676
ENSMUSG00000022895	protein_coding	Ets2	ENSMUST00000233550	retained_intron		16	1	95715854	763
ENSMUSG00000087681	lincRNA	Gm13565	ENSMUST00000133596	lincRNA		2	-1	62441142	700
ENSMUSG00000022895	protein_coding	Ets2	ENSMUST00000233578	retained_intron		16	1	95717734	3312
ENSMUSG00000003421	protein_coding	Nosip	ENSMUST00000211465	protein_coding		7	1	45062473	777
ENSMUSG00000033855	protein_coding	Ston1	ENSMUST00000163588	protein_coding	principal1	17	1	88626555	2983
ENSMUSG00000021336	protein_coding	Slc17a4	ENSMUST00000225797	nonsense_mediated_decay		13	-1	23915007	4394
ENSMUSG00000107066	processed_pseudogene	Gm4482	ENSMUST00000200876	processed_pseudogene		6	-1	122793325	742
ENSMUSG00000087422	lincRNA	Gm13564	ENSMUST00000131533	lincRNA		2	-1	62456648	657
ENSMUSG00000058070	protein_coding	Eml1	ENSMUST00000155544	processed_transcript		12	1	108471853	4169
ENSMUSG00000021852	protein_coding	Slc35f4	ENSMUST00000138884	protein_coding		14	-1	49525865	1810
ENSMUSG00000079620	protein_coding	Muc4	ENSMUST00000115119	processed_transcript		16	1	32776283	1348
ENSMUSG00000117398	processed_pseudogene	Gm9406	ENSMUST00000234525	processed_pseudogene		17	-1	88608544	675
ENSMUSG00000042419	protein_coding	Nfkbil1	ENSMUST00000048994	protein_coding	principal1	17	-1	35235792	1447
ENSMUSG00000079620	protein_coding	Muc4	ENSMUST00000143297	processed_transcript		16	1	32776362	330
ENSMUSG00000058070	protein_coding	Eml1	ENSMUST00000148186	processed_transcript		12	1	108534811	332
ENSMUSG00000079620	protein_coding	Muc4	ENSMUST00000149773	retained_intron		16	1	32777537	297
ENSMUSG00000040328	protein_coding	Olfr56	ENSMUST00000056759	protein_coding		11	1	48978889	1925
ENSMUSG00000018727	protein_coding	Cpsf4l	ENSMUST00000106617	protein_coding		11	-1	113708967	1123
ENSMUSG00000079620	protein_coding	Muc4	ENSMUST00000131419	retained_intron		16	1	32778622	434
ENSMUSG00000026605	protein_coding	Cenpf	ENSMUST00000171929	protein_coding	principal1	1	-1	189688086	11130
ENSMUSG00000039891	protein_coding	Txlnb	ENSMUST00000037964	protein_coding	principal1	10	1	17796256	4422
ENSMUSG00000003421	protein_coding	Nosip	ENSMUST00000209901	retained_intron		7	1	45062489	549
ENSMUSG00000042419	protein_coding	Nfkbil1	ENSMUST00000176748	processed_transcript		17	-1	35221657	662
ENSMUSG00000058070	protein_coding	Eml1	ENSMUST00000123035	processed_transcript		12	1	108534869	1730
ENSMUSG00000040328	protein_coding	Olfr56	ENSMUST00000179282	protein_coding		11	1	48978889	1935
ENSMUSG00000003421	protein_coding	Nosip	ENSMUST00000209308	retained_intron		7	1	45062496	598
ENSMUSG00000079620	protein_coding	Muc4	ENSMUST00000096106	protein_coding	principal1	16	1	32735886	11277
ENSMUSG00000103334	lincRNA	Gm29771	ENSMUST00000193142	lincRNA		3	1	147096184	1423
ENSMUSG00000026605	protein_coding	Cenpf	ENSMUST00000165798	protein_coding		1	-1	189648856	358
ENSMUSG00000003421	protein_coding	Nosip	ENSMUST00000210088	protein_coding		7	1	45062505	696
ENSMUSG00000100816	lincRNA	Gm28321	ENSMUST00000187677	lincRNA		1	1	50815375	2327
ENSMUSG00000103099	processed_pseudogene	Gm6074	ENSMUST00000193340	processed_pseudogene		3	-1	147192918	451
ENSMUSG00000024403	protein_coding	Atp6v1g2	ENSMUST00000146711	retained_intron		17	1	35233660	1882
ENSMUSG00000003421	protein_coding	Nosip	ENSMUST00000210520	protein_coding	alternative2	7	1	45062526	534
ENSMUSG00000042401	protein_coding	Crtac1	ENSMUST00000238290	protein_coding		19	-1	42431785	2164
ENSMUSG00000026605	protein_coding	Cenpf	ENSMUST00000165962	protein_coding		1	-1	189688086	3001
ENSMUSG00000026605	protein_coding	Cenpf	ENSMUST00000194624	retained_intron		1	-1	189671142	3389
ENSMUSG00000021336	protein_coding	Slc17a4	ENSMUST00000225763	retained_intron		13	-1	23915005	3527
ENSMUSG00000106023	lincRNA	Gm36831	ENSMUST00000196485	lincRNA		3	1	147389712	631
ENSMUSG00000003421	protein_coding	Nosip	ENSMUST00000209243	nonsense_mediated_decay		7	1	45073560	679
ENSMUSG00000103302	TEC	Gm37803	ENSMUST00000191620	TEC		3	-1	147409076	711
ENSMUSG00000024403	protein_coding	Atp6v1g2	ENSMUST00000130992	protein_coding		17	1	35235088	524
ENSMUSG00000042401	protein_coding	Crtac1	ENSMUST00000048630	protein_coding	principal1	19	-1	42431783	2618
ENSMUSG00000003421	protein_coding	Nosip	ENSMUST00000210998	processed_transcript		7	1	45075711	488
ENSMUSG00000026605	protein_coding	Cenpf	ENSMUST00000165663	nonsense_mediated_decay		1	-1	189688035	609
ENSMUSG00000026605	protein_coding	Cenpf	ENSMUST00000194165	retained_intron		1	-1	189688086	1027
ENSMUSG00000069910	protein_coding	Spdl1	ENSMUST00000093191	protein_coding	principal1	11	-1	34833641	2505
ENSMUSG00000003421	protein_coding	Nosip	ENSMUST00000210668	retained_intron		7	1	45076408	542
ENSMUSG00000102569	lincRNA	Gm37041	ENSMUST00000195873	lincRNA		3	1	147428889	3853
ENSMUSG00000083789	processed_pseudogene	Gm6092	ENSMUST00000121659	processed_pseudogene		X	-1	95211801	2029
ENSMUSG00000042401	protein_coding	Crtac1	ENSMUST00000238182	protein_coding		19	-1	42287954	395
ENSMUSG00000080298	processed_pseudogene	Gm14807	ENSMUST00000116640	processed_pseudogene		X	-1	95253898	983
ENSMUSG00000082371	processed_pseudogene	Gm3712	ENSMUST00000118523	processed_pseudogene		X	-1	95321889	2071
ENSMUSG00000117195	processed_pseudogene	Gm49881	ENSMUST00000232871	processed_pseudogene		17	-1	74099291	172
ENSMUSG00000103349	lincRNA	Gm36888	ENSMUST00000195819	lincRNA		3	-1	147635647	2945
ENSMUSG00000080283	processed_pseudogene	Gm14806	ENSMUST00000116606	processed_pseudogene		X	-1	95382480	2110
ENSMUSG00000069910	protein_coding	Spdl1	ENSMUST00000148853	retained_intron		11	-1	34823951	1118
ENSMUSG00000069910	protein_coding	Spdl1	ENSMUST00000148387	retained_intron		11	-1	34833592	671
ENSMUSG00000024403	protein_coding	Atp6v1g2	ENSMUST00000118384	protein_coding		17	1	35235878	483
ENSMUSG00000106285	processed_transcript	Gm43574	ENSMUST00000196226	processed_transcript		3	1	148130244	809
ENSMUSG00000021852	protein_coding	Slc35f4	ENSMUST00000074368	protein_coding	principal1	14	-1	49525886	1931
ENSMUSG00000018727	protein_coding	Cpsf4l	ENSMUST00000173655	protein_coding	principal3	11	-1	113709520	1213
ENSMUSG00000105718	TEC	Gm43576	ENSMUST00000197937	TEC		3	1	148454941	871
ENSMUSG00000024403	protein_coding	Atp6v1g2	ENSMUST00000143289	retained_intron		17	1	35235892	1045
ENSMUSG00000103566	TEC	Gm38068	ENSMUST00000192546	TEC		3	1	148569064	540
ENSMUSG00000083653	unprocessed_pseudogene	Gm11384	ENSMUST00000121376	unprocessed_pseudogene		13	-1	33133493	303
ENSMUSG00000117031	processed_pseudogene	Gm49882	ENSMUST00000233609	processed_pseudogene		17	-1	74164574	265
ENSMUSG00000105934	processed_pseudogene	Gm43575	ENSMUST00000196420	processed_pseudogene		3	1	148653060	516
ENSMUSG00000082893	processed_pseudogene	Gm11383	ENSMUST00000121346	processed_pseudogene		13	-1	33121322	807
ENSMUSG00000117113	TEC	Gm49883	ENSMUST00000233013	TEC		17	-1	74190499	3732
ENSMUSG00000024403	protein_coding	Atp6v1g2	ENSMUST00000068261	protein_coding	principal1	17	1	35236562	1528
ENSMUSG00000036492	protein_coding	Rnf39	ENSMUST00000040498	protein_coding	principal1	17	1	36942918	1579
ENSMUSG00000021852	protein_coding	Slc35f4	ENSMUST00000135254	processed_transcript		14	-1	49314209	1313
ENSMUSG00000036492	protein_coding	Rnf39	ENSMUST00000173072	protein_coding		17	1	36943055	631
ENSMUSG00000021852	protein_coding	Slc35f4	ENSMUST00000123534	protein_coding		14	-1	49526046	2748
ENSMUSG00000024403	protein_coding	Atp6v1g2	ENSMUST00000142415	retained_intron		17	1	35236656	1041
ENSMUSG00000036492	protein_coding	Rnf39	ENSMUST00000174669	protein_coding		17	1	36945078	442
ENSMUSG00000021852	protein_coding	Slc35f4	ENSMUST00000146164	protein_coding		14	-1	49525853	2480
ENSMUSG00000035638	protein_coding	Muc20	ENSMUST00000115116	protein_coding	principal4	16	-1	32797435	3673
ENSMUSG00000095906	unprocessed_pseudogene	Gm7421	ENSMUST00000119298	unprocessed_pseudogene		X	-1	29457378	639
ENSMUSG00000018727	protein_coding	Cpsf4l	ENSMUST00000018871	protein_coding		11	-1	113710017	1235
ENSMUSG00000021336	protein_coding	Slc17a4	ENSMUST00000110407	protein_coding	alternative2	13	-1	23915009	2177
ENSMUSG00000021336	protein_coding	Slc17a4	ENSMUST00000224360	retained_intron		13	-1	23915005	2525
ENSMUSG00000035638	protein_coding	Muc20	ENSMUST00000041123	protein_coding	alternative2	16	-1	32797435	2299
ENSMUSG00000018727	protein_coding	Cpsf4l	ENSMUST00000151396	retained_intron		11	-1	113709524	997
ENSMUSG00000042532	protein_coding	Golga7b	ENSMUST00000122375	protein_coding	principal1	19	1	42247574	2836
ENSMUSG00000039473	protein_coding	Ubn1	ENSMUST00000230703	protein_coding	principal2	16	1	5050057	6356
ENSMUSG00000042532	protein_coding	Golga7b	ENSMUST00000087123	protein_coding	principal1	19	1	42255739	2823
ENSMUSG00000114542	processed_pseudogene	Gm18142	ENSMUST00000224124	processed_pseudogene		14	-1	15042169	1363
ENSMUSG00000082681	unprocessed_pseudogene	Cyp2j7-ps1	ENSMUST00000122430	unprocessed_pseudogene		4	-1	96190243	173
ENSMUSG00000018727	protein_coding	Cpsf4l	ENSMUST00000100248	protein_coding	alternative2	11	-1	113709526	1375
ENSMUSG00000021336	protein_coding	Slc17a4	ENSMUST00000021769	protein_coding	principal2	13	-1	23914968	1604
ENSMUSG00000081362	protein_coding	Cyp2j7	ENSMUST00000162514	protein_coding	principal1	4	-1	96236659	1515
ENSMUSG00000039473	protein_coding	Ubn1	ENSMUST00000052449	protein_coding	principal2	16	1	5050068	6455
ENSMUSG00000050332	protein_coding	Amer1	ENSMUST00000084535	protein_coding	principal1	X	-1	95444872	8496
ENSMUSG00000001985	protein_coding	Grik3	ENSMUST00000030676	protein_coding	principal1	4	1	125490700	8973
ENSMUSG00000084286	unprocessed_pseudogene	Cyp2j15-ps	ENSMUST00000122267	unprocessed_pseudogene		4	-1	96274270	686
ENSMUSG00000105245	antisense	Gm31305	ENSMUST00000198557	antisense		3	1	97730339	710
ENSMUSG00000093863	protein_coding	Gm7954	ENSMUST00000164967	protein_coding	principal1	14	-1	41453518	1403
ENSMUSG00000091016	unprocessed_pseudogene	Gm2878	ENSMUST00000170173	unprocessed_pseudogene		14	-1	41475917	486
ENSMUSG00000105245	antisense	Gm31305	ENSMUST00000200435	antisense		3	1	97730529	761
ENSMUSG00000115371	processed_pseudogene	Gm18146	ENSMUST00000226895	processed_pseudogene		14	1	62779697	514
ENSMUSG00000114538	lincRNA	Gm31517	ENSMUST00000225500	lincRNA		14	-1	15065216	3418
ENSMUSG00000082062	processed_pseudogene	Ftl2-ps	ENSMUST00000118517	processed_pseudogene		4	1	125504288	552
ENSMUSG00000039473	protein_coding	Ubn1	ENSMUST00000229126	protein_coding	alternative2	16	1	5050734	5589
ENSMUSG00000114538	lincRNA	Gm31517	ENSMUST00000224074	lincRNA		14	-1	15065231	1049
ENSMUSG00000114538	lincRNA	Gm31517	ENSMUST00000225603	lincRNA		14	-1	15065231	840
ENSMUSG00000087613	lincRNA	Gm13855	ENSMUST00000145644	lincRNA		6	1	34179232	744
ENSMUSG00000037725	protein_coding	Ckap2	ENSMUST00000046916	protein_coding	principal1	8	-1	22185819	2593
ENSMUSG00000114440	processed_pseudogene	Gm47505	ENSMUST00000223767	processed_pseudogene		14	1	62818843	800
ENSMUSG00000039473	protein_coding	Ubn1	ENSMUST00000229060	retained_intron		16	1	5062408	855
ENSMUSG00000114197	TEC	Gm47743	ENSMUST00000225225	TEC		14	1	15063032	2394
ENSMUSG00000108753	TEC	Gm45094	ENSMUST00000207013	TEC		7	-1	35053591	617
ENSMUSG00000090505	protein_coding	Gm3486	ENSMUST00000169361	protein_coding	principal1	14	-1	41489485	883
ENSMUSG00000039473	protein_coding	Ubn1	ENSMUST00000229570	protein_coding		16	1	5064406	693
ENSMUSG00000079266	unprocessed_pseudogene	Gm6490	ENSMUST00000111862	unprocessed_pseudogene		14	1	41517217	461
ENSMUSG00000097958	processed_pseudogene	Gm8492	ENSMUST00000182375	processed_pseudogene		17	-1	9321381	987
ENSMUSG00000108486	sense_intronic	Gm44836	ENSMUST00000205869	sense_intronic		7	-1	35052537	336
ENSMUSG00000090519	unprocessed_pseudogene	Gm17061	ENSMUST00000163167	unprocessed_pseudogene		14	-1	41540815	499
ENSMUSG00000117015	processed_pseudogene	Gm7947	ENSMUST00000232889	processed_pseudogene		17	-1	9323795	1894
ENSMUSG00000031884	unprocessed_pseudogene	Ces2d-ps	ENSMUST00000043209	unprocessed_pseudogene		8	1	104867488	1656
ENSMUSG00000108333	antisense	Gm45095	ENSMUST00000206736	antisense		7	1	35056027	254
ENSMUSG00000039473	protein_coding	Ubn1	ENSMUST00000229355	retained_intron		16	1	5073430	2758
ENSMUSG00000101935	processed_pseudogene	Gm17748	ENSMUST00000177906	processed_pseudogene		17	-1	9422464	522
ENSMUSG00000024590	protein_coding	Lmnb1	ENSMUST00000025486	protein_coding	principal1	18	1	56707813	2843
ENSMUSG00000037725	protein_coding	Ckap2	ENSMUST00000211629	retained_intron		8	-1	22170169	987
ENSMUSG00000030324	protein_coding	Rho	ENSMUST00000032471	protein_coding	principal1	6	1	115931748	4621
ENSMUSG00000039473	protein_coding	Ubn1	ENSMUST00000229386	processed_transcript		16	1	5078056	812
ENSMUSG00000117143	lincRNA	Gm49807	ENSMUST00000232756	lincRNA		17	1	9549691	2421
ENSMUSG00000086762	antisense	Gm14546	ENSMUST00000138275	antisense		6	1	34290265	1647
ENSMUSG00000093833	protein_coding	Gm7970	ENSMUST00000167615	protein_coding	principal1	14	-1	41555583	1403
ENSMUSG00000024154	protein_coding	Gtf2a1l	ENSMUST00000024970	protein_coding	principal1	17	1	88668660	1621
ENSMUSG00000001642	protein_coding	Akr1b3	ENSMUST00000201392	retained_intron		6	-1	34307457	5024
ENSMUSG00000037725	protein_coding	Ckap2	ENSMUST00000211045	retained_intron		8	-1	22175866	683
ENSMUSG00000001642	protein_coding	Akr1b3	ENSMUST00000142761	retained_intron		6	-1	34306687	554
ENSMUSG00000024154	protein_coding	Gtf2a1l	ENSMUST00000234392	processed_transcript		17	1	88668677	1252
ENSMUSG00000024590	protein_coding	Lmnb1	ENSMUST00000128651	retained_intron		18	1	56728441	659
ENSMUSG00000030324	protein_coding	Rho	ENSMUST00000203531	retained_intron		6	1	115931925	683
ENSMUSG00000100671	lincRNA	Gm28322	ENSMUST00000185627	lincRNA		1	1	50904444	1475
ENSMUSG00000024154	protein_coding	Gtf2a1l	ENSMUST00000161481	protein_coding		17	1	88668696	743
ENSMUSG00000030324	protein_coding	Rho	ENSMUST00000204711	protein_coding		6	1	115932556	870
ENSMUSG00000099924	sense_intronic	Gm28320	ENSMUST00000187777	sense_intronic		1	1	51148309	2273
ENSMUSG00000101242	antisense	Gm28319	ENSMUST00000189560	antisense		1	-1	51141222	226
ENSMUSG00000090440	protein_coding	1700049E17Rik2	ENSMUST00000163912	protein_coding	principal5	14	1	41573211	1757
ENSMUSG00000107597	processed_transcript	Gm44764	ENSMUST00000204912	lincRNA		6	-1	48863100	671
ENSMUSG00000056216	protein_coding	Cebpg	ENSMUST00000130491	protein_coding	principal1	7	-1	35056573	4709
ENSMUSG00000026109	protein_coding	Tmeff2	ENSMUST00000186103	processed_transcript		1	1	50900647	1274
ENSMUSG00000090440	protein_coding	1700049E17Rik2	ENSMUST00000111874	protein_coding	alternative2	14	1	41573342	492
ENSMUSG00000107597	processed_transcript	Gm44764	ENSMUST00000204021	retained_intron		6	-1	48863107	655
ENSMUSG00000026109	protein_coding	Tmeff2	ENSMUST00000139157	processed_transcript		1	1	50900647	415
ENSMUSG00000056216	protein_coding	Cebpg	ENSMUST00000205752	retained_intron		7	-1	35051505	1610
ENSMUSG00000108084	lincRNA	Gm7932	ENSMUST00000205047	lincRNA		6	1	48860329	2194
ENSMUSG00000030324	protein_coding	Rho	ENSMUST00000203877	protein_coding		6	1	115934341	939
ENSMUSG00000027350	protein_coding	Chgb	ENSMUST00000028826	protein_coding	principal1	2	1	132781278	2740
ENSMUSG00000031204	protein_coding	Asb12	ENSMUST00000033549	protein_coding	principal1	X	-1	95478129	1258
ENSMUSG00000056216	protein_coding	Cebpg	ENSMUST00000070191	protein_coding	principal1	7	-1	35055940	914
ENSMUSG00000108084	lincRNA	Gm7932	ENSMUST00000101425	lincRNA		6	1	48860424	371
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000183330	protein_coding		7	-1	29377605	4321
ENSMUSG00000056216	protein_coding	Cebpg	ENSMUST00000206505	processed_transcript		7	-1	35055983	399
ENSMUSG00000030324	protein_coding	Rho	ENSMUST00000204493	nonsense_mediated_decay		6	1	115934372	883
ENSMUSG00000086691	processed_pseudogene	Gm15432	ENSMUST00000121106	processed_pseudogene		X	-1	29564208	195
ENSMUSG00000024107	protein_coding	Lhcgr	ENSMUST00000234881	processed_transcript		17	-1	88774056	1073
ENSMUSG00000031204	protein_coding	Asb12	ENSMUST00000134899	protein_coding		X	-1	95557987	600
ENSMUSG00000030324	protein_coding	Rho	ENSMUST00000203284	retained_intron		6	1	115934738	1186
ENSMUSG00000030086	protein_coding	Chchd6	ENSMUST00000032172	protein_coding	principal1	6	-1	89595652	1121
ENSMUSG00000039316	protein_coding	Rftn1	ENSMUST00000044503	protein_coding	principal1	17	-1	50190674	4029
ENSMUSG00000030324	protein_coding	Rho	ENSMUST00000203323	retained_intron		6	1	115935197	911
ENSMUSG00000107548	TEC	Gm43866	ENSMUST00000203894	TEC		6	-1	115936526	839
ENSMUSG00000028919	protein_coding	Arhgef19	ENSMUST00000141834	protein_coding		4	1	141239499	872
ENSMUSG00000030086	protein_coding	Chchd6	ENSMUST00000204970	retained_intron		6	-1	89595604	2140
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000039798	protein_coding	principal2	9	1	22475715	3382
ENSMUSG00000117262	processed_pseudogene	Gm9316	ENSMUST00000233585	processed_pseudogene		17	1	74211958	2125
ENSMUSG00000030086	protein_coding	Chchd6	ENSMUST00000204654	nonsense_mediated_decay		6	-1	89595611	409
ENSMUSG00000039316	protein_coding	Rftn1	ENSMUST00000113195	protein_coding		17	-1	50094332	2385
ENSMUSG00000028919	protein_coding	Arhgef19	ENSMUST00000140536	retained_intron		4	1	141239650	1311
ENSMUSG00000039316	protein_coding	Rftn1	ENSMUST00000156094	retained_intron		17	-1	50190497	1759
ENSMUSG00000030086	protein_coding	Chchd6	ENSMUST00000113550	protein_coding		6	-1	89595652	1042
ENSMUSG00000028919	protein_coding	Arhgef19	ENSMUST00000138096	protein_coding		4	1	141242855	594
ENSMUSG00000117117	lincRNA	Gm49901	ENSMUST00000233275	lincRNA		17	1	50114019	2465
ENSMUSG00000107680	TEC	Gm43903	ENSMUST00000205126	TEC		6	-1	89527455	617
ENSMUSG00000026109	protein_coding	Tmeff2	ENSMUST00000114565	protein_coding		1	1	50909962	2718
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000077693	protein_coding	principal3	5	-1	31193430	2025
ENSMUSG00000003153	protein_coding	Slc2a3	ENSMUST00000032476	protein_coding	principal1	6	-1	122742745	3959
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000202758	protein_coding		5	-1	31193008	1767
ENSMUSG00000032527	protein_coding	Pccb	ENSMUST00000149322	protein_coding		9	-1	101034877	2188
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000150395	protein_coding	principal2	9	1	22475722	3425
ENSMUSG00000034035	protein_coding	Ccdc17	ENSMUST00000051869	protein_coding	principal1	4	1	116596730	2003
ENSMUSG00000043419	protein_coding	Rnf227	ENSMUST00000129321	protein_coding	principal1	11	1	69340461	2081
ENSMUSG00000028278	protein_coding	Rragd	ENSMUST00000098190	protein_coding	principal1	4	1	32983037	5008
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000142313	protein_coding		9	1	22475731	833
ENSMUSG00000043419	protein_coding	Rnf227	ENSMUST00000218008	protein_coding		11	1	69340771	1026
ENSMUSG00000066097	protein_coding	Cyp2j11	ENSMUST00000015368	protein_coding	principal1	4	-1	96348662	1917
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000147712	protein_coding	principal2	9	1	22475731	3495
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000032335	protein_coding	principal1	6	1	136518802	8059
ENSMUSG00000043419	protein_coding	Rnf227	ENSMUST00000151617	protein_coding		11	1	69340809	389
ENSMUSG00000028278	protein_coding	Rragd	ENSMUST00000029946	protein_coding		4	1	32983155	5055
ENSMUSG00000028278	protein_coding	Rragd	ENSMUST00000084747	protein_coding		4	1	32983454	4295
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000114603	protein_coding	alternative2	5	-1	31193014	1966
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000128812	protein_coding		9	1	22475867	833
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000147405	protein_coding	alternative1	9	1	22490829	3045
ENSMUSG00000024107	protein_coding	Lhcgr	ENSMUST00000024916	protein_coding	principal1	17	-1	88791976	6828
ENSMUSG00000108739	lincRNA	Gm45096	ENSMUST00000205833	lincRNA		7	-1	35066733	427
ENSMUSG00000030056	protein_coding	Isy1	ENSMUST00000089497	protein_coding	principal1	6	-1	87838798	5837
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000200724	protein_coding		5	-1	31191647	768
ENSMUSG00000028278	protein_coding	Rragd	ENSMUST00000136792	processed_transcript		4	1	33005196	452
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000185724	protein_coding		6	1	136518806	1967
ENSMUSG00000082119	unprocessed_pseudogene	Cyp2j14-ps	ENSMUST00000117776	unprocessed_pseudogene		4	-1	96380211	361
ENSMUSG00000081025	processed_pseudogene	Gm11943	ENSMUST00000119473	processed_pseudogene		4	-1	33002321	327
ENSMUSG00000024669	protein_coding	Cd5	ENSMUST00000238167	protein_coding	alternative2	19	-1	10739002	2989
ENSMUSG00000079056	protein_coding	Kcnip3	ENSMUST00000028850	protein_coding		2	-1	127521370	2728
ENSMUSG00000032527	protein_coding	Pccb	ENSMUST00000035116	protein_coding	principal1	9	-1	101034898	2320
ENSMUSG00000026109	protein_coding	Tmeff2	ENSMUST00000081851	protein_coding	principal1	1	1	50927519	3343
ENSMUSG00000003153	protein_coding	Slc2a3	ENSMUST00000168704	retained_intron		6	-1	122742522	6253
ENSMUSG00000024107	protein_coding	Lhcgr	ENSMUST00000234368	nonsense_mediated_decay		17	-1	88791990	3957
ENSMUSG00000108657	lincRNA	Gm35611	ENSMUST00000205323	lincRNA		7	1	35086836	799
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000186577	protein_coding		6	1	136518841	712
ENSMUSG00000003153	protein_coding	Slc2a3	ENSMUST00000166135	nonsense_mediated_decay		6	-1	122742390	1321
ENSMUSG00000118614	lincRNA	AC107703.1	ENSMUST00000239228	lincRNA		12	-1	12669917	728
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000202616	retained_intron		5	-1	31190861	678
ENSMUSG00000032527	protein_coding	Pccb	ENSMUST00000149998	retained_intron		9	-1	100985609	582
ENSMUSG00000003153	protein_coding	Slc2a3	ENSMUST00000169979	retained_intron		6	-1	122733176	547
ENSMUSG00000113009	TEC	3732407C23Rik	ENSMUST00000222770	TEC		12	1	12722861	3540
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000185936	retained_intron		6	1	136518846	5552
ENSMUSG00000030056	protein_coding	Isy1	ENSMUST00000204881	nonsense_mediated_decay		6	-1	87838738	751
ENSMUSG00000024107	protein_coding	Lhcgr	ENSMUST00000234269	retained_intron		17	-1	88791971	653
ENSMUSG00000032527	protein_coding	Pccb	ENSMUST00000142676	protein_coding		9	-1	101034867	778
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000200977	protein_coding		5	-1	31189916	219
ENSMUSG00000003153	protein_coding	Slc2a3	ENSMUST00000165884	protein_coding		6	-1	122801640	601
ENSMUSG00000117566	processed_pseudogene	Gm9407	ENSMUST00000234561	processed_pseudogene		17	-1	88856622	390
ENSMUSG00000030056	protein_coding	Isy1	ENSMUST00000203429	retained_intron		6	-1	87822554	267
ENSMUSG00000087269	processed_transcript	D330023K18Rik	ENSMUST00000148230	processed_transcript		2	-1	31152291	577
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000152719	processed_transcript		9	1	22512457	716
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000200741	protein_coding		5	-1	31191151	488
ENSMUSG00000003153	protein_coding	Slc2a3	ENSMUST00000171541	nonsense_mediated_decay		6	-1	122779957	315
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000137547	processed_transcript		9	1	22574409	542
ENSMUSG00000003153	protein_coding	Slc2a3	ENSMUST00000170724	protein_coding		6	-1	122742262	418
ENSMUSG00000103228	TEC	Gm37727	ENSMUST00000191637	TEC		13	1	90157154	819
ENSMUSG00000032527	protein_coding	Pccb	ENSMUST00000145091	processed_transcript		9	-1	101034850	800
ENSMUSG00000001642	protein_coding	Akr1b3	ENSMUST00000102980	protein_coding	principal1	6	-1	34317478	1387
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000187429	protein_coding		6	1	136532927	3018
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000200929	protein_coding		5	-1	31191199	281
ENSMUSG00000024669	protein_coding	Cd5	ENSMUST00000025571	protein_coding	principal2	19	-1	10738974	2067
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000136084	protein_coding		9	1	22635665	638
ENSMUSG00000032527	protein_coding	Pccb	ENSMUST00000189498	protein_coding		9	-1	101034881	421
ENSMUSG00000003153	protein_coding	Slc2a3	ENSMUST00000168801	protein_coding		6	-1	122742920	418
ENSMUSG00000115856	processed_pseudogene	Gm18095	ENSMUST00000229366	processed_pseudogene		15	1	99880199	746
ENSMUSG00000030056	protein_coding	Isy1	ENSMUST00000205070	nonsense_mediated_decay		6	-1	87838700	500
ENSMUSG00000034035	protein_coding	Ccdc17	ENSMUST00000121907	processed_transcript		4	1	116596654	1908
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000186742	protein_coding		6	1	136551187	177
ENSMUSG00000116478	processed_pseudogene	Gm18890	ENSMUST00000230043	processed_pseudogene		15	1	99883640	805
ENSMUSG00000024669	protein_coding	Cd5	ENSMUST00000235856	protein_coding		19	-1	10722074	825
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000189535	protein_coding		6	1	136554004	528
ENSMUSG00000024669	protein_coding	Cd5	ENSMUST00000237397	retained_intron		19	-1	10738909	1486
ENSMUSG00000034035	protein_coding	Ccdc17	ENSMUST00000151441	processed_transcript		4	1	116597760	1167
ENSMUSG00000037438	processed_pseudogene	Uqcrh-ps1	ENSMUST00000038391	processed_pseudogene		15	-1	99898556	268
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000195743	retained_intron		6	1	136554022	1169
ENSMUSG00000093687	processed_pseudogene	Gm20637	ENSMUST00000175715	processed_pseudogene		2	1	155546385	462
ENSMUSG00000034035	protein_coding	Ccdc17	ENSMUST00000146777	processed_transcript		4	1	116596803	953
ENSMUSG00000085090	lincRNA	Gm12711	ENSMUST00000131249	lincRNA		11	1	34880339	340
ENSMUSG00000034035	protein_coding	Ccdc17	ENSMUST00000148260	processed_transcript		4	1	116598492	673
ENSMUSG00000032937	protein_coding	Fshr	ENSMUST00000035701	protein_coding	principal1	17	-1	89200675	2360
ENSMUSG00000116141	TEC	Gm49495	ENSMUST00000230686	TEC		15	1	99902963	1314
ENSMUSG00000081441	processed_pseudogene	Gm6161	ENSMUST00000121942	processed_pseudogene		1	1	9574548	1102
ENSMUSG00000087269	processed_transcript	D330023K18Rik	ENSMUST00000133550	processed_transcript		2	-1	31152291	920
ENSMUSG00000116255	processed_pseudogene	Gm20564	ENSMUST00000230306	processed_pseudogene		15	-1	99915900	473
ENSMUSG00000100563	processed_pseudogene	Gm3096	ENSMUST00000185770	processed_pseudogene		9	1	101053542	364
ENSMUSG00000085408	processed_transcript	C530005A16Rik	ENSMUST00000142815	processed_transcript		4	-1	116597630	2436
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000203178	protein_coding		6	1	136560843	1034
ENSMUSG00000066151	protein_coding	Fkbp15	ENSMUST00000084527	protein_coding	principal2	4	-1	62360470	4264
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000188805	retained_intron		6	1	136577579	4833
ENSMUSG00000066151	protein_coding	Fkbp15	ENSMUST00000239461	protein_coding		4	-1	62338495	4883
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000127296	nonsense_mediated_decay		9	1	22643841	1640
ENSMUSG00000108624	antisense	Gm45091	ENSMUST00000205799	antisense		7	-1	35119605	504
ENSMUSG00000066151	protein_coding	Fkbp15	ENSMUST00000084528	protein_coding	alternative2	4	-1	62360548	3329
ENSMUSG00000001642	protein_coding	Akr1b3	ENSMUST00000136559	retained_intron		6	-1	34317441	3254
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000200983	processed_transcript		5	-1	31193139	654
ENSMUSG00000030213	protein_coding	Atf7ip	ENSMUST00000185332	retained_intron		6	1	136595586	3226
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000130479	retained_intron		9	1	22658280	2641
ENSMUSG00000034957	protein_coding	Cebpa	ENSMUST00000205391	protein_coding		7	1	35119293	2161
ENSMUSG00000001642	protein_coding	Akr1b3	ENSMUST00000126991	retained_intron		6	-1	34317430	845
ENSMUSG00000066151	protein_coding	Fkbp15	ENSMUST00000098033	protein_coding	alternative2	4	-1	62360494	2323
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000202468	retained_intron		5	-1	31192999	512
ENSMUSG00000035919	protein_coding	Bbs9	ENSMUST00000124076	retained_intron		9	1	22678750	1012
ENSMUSG00000001642	protein_coding	Akr1b3	ENSMUST00000154655	protein_coding		6	-1	34317459	583
ENSMUSG00000089909	processed_pseudogene	Gm16164	ENSMUST00000160078	processed_pseudogene		9	-1	22678318	468
ENSMUSG00000066151	protein_coding	Fkbp15	ENSMUST00000107461	protein_coding	alternative2	4	-1	62360534	2337
ENSMUSG00000015747	protein_coding	Vps45	ENSMUST00000015891	protein_coding	principal1	3	-1	96058466	2637
ENSMUSG00000096111	antisense	Gm21917	ENSMUST00000179575	antisense		15	1	99931711	575
ENSMUSG00000066964	protein_coding	Tmem211	ENSMUST00000086615	protein_coding	principal1	5	1	113226909	1827
ENSMUSG00000034957	protein_coding	Cebpa	ENSMUST00000042985	protein_coding	principal1	7	1	35119303	2626
ENSMUSG00000096111	antisense	Gm21917	ENSMUST00000180309	antisense		15	1	99931711	561
ENSMUSG00000030056	protein_coding	Isy1	ENSMUST00000204310	retained_intron		6	-1	87838756	643
ENSMUSG00000096111	antisense	Gm21917	ENSMUST00000177831	antisense		15	1	99934813	666
ENSMUSG00000066151	protein_coding	Fkbp15	ENSMUST00000131977	processed_transcript		4	-1	62360469	1739
ENSMUSG00000030056	protein_coding	Isy1	ENSMUST00000204421	retained_intron		6	-1	87838713	916
ENSMUSG00000104481	TEC	Gm38063	ENSMUST00000193990	TEC		10	1	63098349	342
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000201154	protein_coding		5	-1	31193418	781
ENSMUSG00000100736	processed_pseudogene	Gm5147	ENSMUST00000185999	processed_pseudogene		1	-1	55120873	794
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000187759	processed_transcript		Y	-1	74043464	1600
ENSMUSG00000030056	protein_coding	Isy1	ENSMUST00000204431	protein_coding		6	-1	87838747	387
ENSMUSG00000015747	protein_coding	Vps45	ENSMUST00000131281	retained_intron		3	-1	96057830	2004
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000186558	processed_transcript		Y	-1	74043464	1033
ENSMUSG00000030056	protein_coding	Isy1	ENSMUST00000204892	retained_intron		6	-1	87838756	394
ENSMUSG00000089670	processed_pseudogene	Gm16581	ENSMUST00000160730	processed_pseudogene		1	1	55127297	991
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000186664	processed_transcript		Y	-1	74039931	675
ENSMUSG00000015747	protein_coding	Vps45	ENSMUST00000140518	processed_transcript		3	-1	96057719	266
ENSMUSG00000108064	TEC	Gm44423	ENSMUST00000203746	TEC		6	-1	87799227	3158
ENSMUSG00000029145	protein_coding	Eif2b4	ENSMUST00000166769	protein_coding	alternative2	5	-1	31193139	1878
ENSMUSG00000084854	lincRNA	Gm12678	ENSMUST00000154177	lincRNA		4	1	44943753	692
ENSMUSG00000096137	unprocessed_pseudogene	Gm14527	ENSMUST00000179300	unprocessed_pseudogene		X	-1	29646381	639
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000191477	processed_transcript		Y	-1	74043369	295
ENSMUSG00000045969	protein_coding	Ing1	ENSMUST00000211007	protein_coding		8	1	11555571	2241
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000186926	processed_transcript		Y	-1	74043378	120
ENSMUSG00000105995	processed_pseudogene	Gm43554	ENSMUST00000199987	processed_pseudogene		3	1	96086871	186
ENSMUSG00000086205	antisense	Gm12679	ENSMUST00000123899	antisense		4	-1	44978319	636
ENSMUSG00000103289	processed_pseudogene	Gm31256	ENSMUST00000194705	processed_pseudogene		1	1	159378404	506
ENSMUSG00000024524	protein_coding	Gnal	ENSMUST00000025402	protein_coding		18	1	67088216	5736
ENSMUSG00000045969	protein_coding	Ing1	ENSMUST00000210740	protein_coding		8	1	11556063	1866
ENSMUSG00000086000	antisense	Gm12493	ENSMUST00000150111	antisense		4	1	44967769	441
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000185868	processed_transcript		Y	-1	74043408	571
ENSMUSG00000082049	processed_pseudogene	Gm12105	ENSMUST00000120846	processed_pseudogene		11	1	31120003	779
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000188238	processed_transcript		Y	-1	74043382	654
ENSMUSG00000045969	protein_coding	Ing1	ENSMUST00000210670	protein_coding		8	1	11556065	382
ENSMUSG00000082932	protein_coding	Cyp2j8	ENSMUST00000124729	protein_coding	principal1	4	-1	96507386	1512
ENSMUSG00000079890	unprocessed_pseudogene	Gm12106	ENSMUST00000116006	unprocessed_pseudogene		11	-1	31184374	1200
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000182223	retained_intron		7	-1	29354297	3697
ENSMUSG00000024524	protein_coding	Gnal	ENSMUST00000237445	protein_coding		18	1	67088284	1191
ENSMUSG00000095152	unprocessed_pseudogene	Gm3657	ENSMUST00000178170	unprocessed_pseudogene		X	-1	29802638	639
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000189305	processed_transcript		Y	-1	74041427	327
ENSMUSG00000035208	protein_coding	Slfn8	ENSMUST00000215239	protein_coding		11	-1	83017715	2930
ENSMUSG00000038302	protein_coding	Afg1l	ENSMUST00000041024	protein_coding	principal1	10	-1	42478565	2513
ENSMUSG00000067879	protein_coding	Vxn	ENSMUST00000088666	protein_coding	principal1	1	1	9601199	3256
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000191244	processed_transcript		Y	-1	74043407	254
ENSMUSG00000024524	protein_coding	Gnal	ENSMUST00000237985	protein_coding		18	1	67088298	2022
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000190513	processed_transcript		Y	-1	74043364	397
ENSMUSG00000102615	TEC	Gm37844	ENSMUST00000192473	TEC		8	-1	15028422	4097
ENSMUSG00000024524	protein_coding	Gnal	ENSMUST00000236551	protein_coding		18	1	67088335	2264
ENSMUSG00000038302	protein_coding	Afg1l	ENSMUST00000151747	protein_coding		10	-1	42478280	1952
ENSMUSG00000058704	protein_coding	Memo1	ENSMUST00000233514	protein_coding	principal1	17	-1	74294863	3163
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000190423	processed_transcript		Y	-1	74041427	229
ENSMUSG00000099685	transcribed_unprocessed_pseudogene	Gm29617	ENSMUST00000185730	transcribed_unprocessed_pseudogene		Y	-1	74041861	610
ENSMUSG00000098322	antisense	5830468F06Rik	ENSMUST00000184288	antisense		8	-1	15018907	1104
ENSMUSG00000079056	protein_coding	Kcnip3	ENSMUST00000103215	protein_coding	principal3	2	-1	127521370	2732
ENSMUSG00000024524	protein_coding	Gnal	ENSMUST00000236771	protein_coding	principal1	18	1	67132983	1284
ENSMUSG00000045969	protein_coding	Ing1	ENSMUST00000054399	protein_coding	principal1	8	1	11556066	2814
ENSMUSG00000024524	protein_coding	Gnal	ENSMUST00000237304	protein_coding		18	1	67133004	315
ENSMUSG00000091430	lincRNA	Platr19	ENSMUST00000171380	lincRNA		12	1	12787985	1466
ENSMUSG00000045350	protein_coding	Fam186a	ENSMUST00000062631	protein_coding	principal2	15	-1	99931796	759
ENSMUSG00000027411	protein_coding	Vps16	ENSMUST00000125973	retained_intron		2	1	130424339	653
ENSMUSG00000038302	protein_coding	Afg1l	ENSMUST00000133326	nonsense_mediated_decay		10	-1	42478415	2552
ENSMUSG00000045969	protein_coding	Ing1	ENSMUST00000209646	protein_coding		8	1	11556111	721
ENSMUSG00000055675	protein_coding	Kbtbd11	ENSMUST00000069399	protein_coding	principal1	8	1	15011025	6973
ENSMUSG00000045969	protein_coding	Ing1	ENSMUST00000210041	protein_coding		8	1	11558196	1881
ENSMUSG00000038302	protein_coding	Afg1l	ENSMUST00000149832	nonsense_mediated_decay		10	-1	42425308	776
ENSMUSG00000081873	processed_pseudogene	Gm15197	ENSMUST00000120526	processed_pseudogene		10	-1	42331263	478
ENSMUSG00000055675	protein_coding	Kbtbd11	ENSMUST00000184598	processed_transcript		8	1	15011306	616
ENSMUSG00000110327	processed_pseudogene	Gm17994	ENSMUST00000209260	processed_pseudogene		8	-1	57292052	533
ENSMUSG00000083429	processed_pseudogene	Gm15198	ENSMUST00000117283	processed_pseudogene		10	1	42435889	177
ENSMUSG00000045969	protein_coding	Ing1	ENSMUST00000209565	protein_coding		8	1	11558429	1971
ENSMUSG00000079056	protein_coding	Kcnip3	ENSMUST00000088538	protein_coding	alternative1	2	-1	127482499	1296
ENSMUSG00000028919	protein_coding	Arhgef19	ENSMUST00000006618	protein_coding	principal1	4	1	141242869	3414
ENSMUSG00000028919	protein_coding	Arhgef19	ENSMUST00000125392	protein_coding		4	1	141242893	606
ENSMUSG00000055675	protein_coding	Kbtbd11	ENSMUST00000183471	nonsense_mediated_decay		8	1	15027290	5696
ENSMUSG00000045350	protein_coding	Fam186a	ENSMUST00000100209	protein_coding	alternative2	15	-1	99967061	9320
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000166104	protein_coding		13	1	114818236	1193
ENSMUSG00000028919	protein_coding	Arhgef19	ENSMUST00000135623	protein_coding		4	1	141245425	832
ENSMUSG00000055675	protein_coding	Kbtbd11	ENSMUST00000184243	processed_transcript		8	1	15032390	224
ENSMUSG00000028919	protein_coding	Arhgef19	ENSMUST00000147903	protein_coding		4	1	141246396	663
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000183096	protein_coding	principal1	7	-1	29505460	7713
ENSMUSG00000079056	protein_coding	Kcnip3	ENSMUST00000137625	processed_transcript		2	-1	127522094	1172
ENSMUSG00000118630	unprocessed_pseudogene	AL731831.1	ENSMUST00000239264	unprocessed_pseudogene		2	-1	127519295	474
ENSMUSG00000038193	protein_coding	Hand2	ENSMUST00000040104	protein_coding	principal1	8	1	57320983	2351
ENSMUSG00000024524	protein_coding	Gnal	ENSMUST00000076605	protein_coding	principal1	18	1	67133022	3470
ENSMUSG00000025573	protein_coding	6030468B19Rik	ENSMUST00000106331	protein_coding	principal1	11	1	117797660	1071
ENSMUSG00000104383	TEC	Gm37553	ENSMUST00000194135	TEC		9	1	101092977	1602
ENSMUSG00000028919	protein_coding	Arhgef19	ENSMUST00000184162	retained_intron		4	1	141246926	621
ENSMUSG00000033295	protein_coding	Ptprf	ENSMUST00000049074	protein_coding	principal1	4	-1	118291405	7656
ENSMUSG00000060166	protein_coding	Zdhhc8	ENSMUST00000076957	protein_coding	principal1	16	-1	18235136	4868
ENSMUSG00000103389	processed_pseudogene	Gm37757	ENSMUST00000193072	processed_pseudogene		1	1	159428960	210
ENSMUSG00000066415	protein_coding	Msl2	ENSMUST00000189616	protein_coding		9	1	101074101	2612
ENSMUSG00000049008	protein_coding	BB014433	ENSMUST00000050493	protein_coding	principal1	8	-1	15046069	1753
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000182009	retained_intron		7	-1	29354219	2660
ENSMUSG00000058704	protein_coding	Memo1	ENSMUST00000233422	processed_transcript		17	-1	74288648	1403
ENSMUSG00000024524	protein_coding	Gnal	ENSMUST00000236918	protein_coding		18	1	67133750	2555
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000182780	protein_coding		7	-1	29328988	601
ENSMUSG00000058704	protein_coding	Memo1	ENSMUST00000078459	protein_coding		17	-1	74294790	1400
ENSMUSG00000058704	protein_coding	Memo1	ENSMUST00000232989	protein_coding		17	-1	74294801	1210
ENSMUSG00000049008	protein_coding	BB014433	ENSMUST00000123331	protein_coding		8	-1	15046078	722
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000165669	retained_intron		13	1	114818244	469
ENSMUSG00000046173	protein_coding	Pabpc6	ENSMUST00000057190	protein_coding	principal1	17	-1	9669717	3223
ENSMUSG00000060166	protein_coding	Zdhhc8	ENSMUST00000231412	protein_coding		16	-1	18224682	652
ENSMUSG00000049008	protein_coding	BB014433	ENSMUST00000179941	protein_coding	principal1	8	-1	15043077	1543
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000184282	retained_intron		13	1	114818258	3731
ENSMUSG00000109871	TEC	Gm45276	ENSMUST00000209549	TEC		8	1	15044563	1086
ENSMUSG00000066415	protein_coding	Msl2	ENSMUST00000085177	protein_coding	principal1	9	1	101074762	4889
ENSMUSG00000033295	protein_coding	Ptprf	ENSMUST00000123484	processed_transcript		4	-1	118217680	3306
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000182484	protein_coding		7	-1	29367818	2420
ENSMUSG00000097079	antisense	Gm26604	ENSMUST00000180926	antisense		7	1	29071603	1766
ENSMUSG00000097079	antisense	Gm26604	ENSMUST00000209109	retained_intron		7	1	29071637	2020
ENSMUSG00000117341	lincRNA	Gm34684	ENSMUST00000233459	lincRNA		17	-1	9726361	585
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000226075	antisense		8	-1	57320228	572
ENSMUSG00000058704	protein_coding	Memo1	ENSMUST00000233176	nonsense_mediated_decay		17	-1	74294799	1084
ENSMUSG00000033295	protein_coding	Ptprf	ENSMUST00000150096	protein_coding		4	-1	118236445	4690
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000182829	retained_intron		7	-1	29341868	6385
ENSMUSG00000117341	lincRNA	Gm34684	ENSMUST00000233960	lincRNA		17	-1	9726353	588
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000183164	retained_intron		7	-1	29339063	712
ENSMUSG00000033295	protein_coding	Ptprf	ENSMUST00000124758	protein_coding		4	-1	118236016	4808
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000182911	retained_intron		7	-1	29367291	1708
ENSMUSG00000033295	protein_coding	Ptprf	ENSMUST00000127616	processed_transcript		4	-1	118210741	770
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000183275	protein_coding		7	-1	29367826	452
ENSMUSG00000117264	processed_transcript	4930452A19Rik	ENSMUST00000233804	lincRNA		17	-1	9775866	591
ENSMUSG00000028645	protein_coding	Slc2a1	ENSMUST00000030398	protein_coding	principal1	4	1	119108711	3260
ENSMUSG00000058704	protein_coding	Memo1	ENSMUST00000232987	nonsense_mediated_decay		17	-1	74295496	1041
ENSMUSG00000117264	processed_transcript	4930452A19Rik	ENSMUST00000233594	retained_intron		17	-1	9775867	895
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000182529	retained_intron		7	-1	29377745	702
ENSMUSG00000033295	protein_coding	Ptprf	ENSMUST00000143348	processed_transcript		4	-1	118231100	744
ENSMUSG00000106868	processed_pseudogene	Gm19798	ENSMUST00000201502	processed_pseudogene		5	-1	34061217	457
ENSMUSG00000114770	lincRNA	4921522A10Rik	ENSMUST00000224589	lincRNA		14	-1	15110333	736
ENSMUSG00000033295	protein_coding	Ptprf	ENSMUST00000222620	protein_coding		4	-1	118291274	1309
ENSMUSG00000058704	protein_coding	Memo1	ENSMUST00000233495	processed_transcript		17	-1	74230501	732
ENSMUSG00000106902	antisense	4930557J02Rik	ENSMUST00000202325	antisense		5	1	34118740	1075
ENSMUSG00000114946	TEC	Gm47756	ENSMUST00000226077	TEC		14	-1	15120977	2665
ENSMUSG00000117290	TEC	Gm34883	ENSMUST00000232698	TEC		17	-1	9849188	1724
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000182011	processed_transcript		7	-1	29505452	2774
ENSMUSG00000058704	protein_coding	Memo1	ENSMUST00000233144	protein_coding		17	-1	74295521	448
ENSMUSG00000114323	lincRNA	Gm47758	ENSMUST00000225983	lincRNA		14	-1	15157213	1184
ENSMUSG00000028645	protein_coding	Slc2a1	ENSMUST00000134105	protein_coding		4	1	119108804	698
ENSMUSG00000058704	protein_coding	Memo1	ENSMUST00000233214	retained_intron		17	-1	74294841	2901
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000181975	protein_coding		7	-1	29518612	678
ENSMUSG00000058704	protein_coding	Memo1	ENSMUST00000232861	TEC		17	-1	74255985	1311
ENSMUSG00000117110	lincRNA	Gm49808	ENSMUST00000233332	lincRNA		17	1	9864419	806
ENSMUSG00000104061	TEC	Gm37953	ENSMUST00000195293	TEC		9	1	101150312	1884
ENSMUSG00000028645	protein_coding	Slc2a1	ENSMUST00000144329	protein_coding		4	1	119108859	633
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000182702	processed_transcript		7	-1	29518641	537
ENSMUSG00000114711	processed_pseudogene	Gm47759	ENSMUST00000224931	processed_pseudogene		14	-1	15226166	2215
ENSMUSG00000028645	protein_coding	Slc2a1	ENSMUST00000208090	protein_coding		4	1	119108869	434
ENSMUSG00000104392	TEC	Gm37962	ENSMUST00000195535	TEC		9	1	101113805	2034
ENSMUSG00000104094	TEC	Gm37314	ENSMUST00000193545	TEC		9	-1	101191282	2685
ENSMUSG00000102452	TEC	Gm38344	ENSMUST00000195306	TEC		9	-1	101187908	1353
ENSMUSG00000028645	protein_coding	Slc2a1	ENSMUST00000174372	nonsense_mediated_decay		4	1	119108914	2241
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000182236	processed_transcript		7	-1	29518615	503
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000223874	antisense		8	-1	57320831	328
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000223961	retained_intron		8	-1	57294011	1609
ENSMUSG00000035208	protein_coding	Slfn8	ENSMUST00000038141	protein_coding	principal1	11	-1	83020810	4011
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000183081	processed_transcript		7	-1	29518560	625
ENSMUSG00000117227	lincRNA	Gm34799	ENSMUST00000232911	lincRNA		17	-1	9929767	665
ENSMUSG00000086683	antisense	Gm12867	ENSMUST00000151216	antisense		4	-1	119131001	457
ENSMUSG00000114683	processed_pseudogene	Gm47763	ENSMUST00000225826	processed_pseudogene		14	-1	15298861	339
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000183085	processed_transcript		7	-1	29518555	254
ENSMUSG00000035208	protein_coding	Slfn8	ENSMUST00000092838	protein_coding	principal1	11	-1	83020810	3529
ENSMUSG00000114789	lincRNA	Gm31577	ENSMUST00000225059	lincRNA		14	-1	15310122	800
ENSMUSG00000114789	lincRNA	Gm31577	ENSMUST00000225842	lincRNA		14	-1	15308440	1055
ENSMUSG00000030583	protein_coding	Sipa1l3	ENSMUST00000085809	protein_coding	principal1	7	-1	29505460	7713
ENSMUSG00000114789	lincRNA	Gm31577	ENSMUST00000225007	lincRNA		14	-1	15314298	1809
ENSMUSG00000085505	antisense	Gm12868	ENSMUST00000143801	antisense		4	-1	119138801	417
ENSMUSG00000114789	lincRNA	Gm31577	ENSMUST00000225656	lincRNA		14	-1	15316545	859
ENSMUSG00000114789	lincRNA	Gm31577	ENSMUST00000224606	lincRNA		14	-1	15321874	1205
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000044532	protein_coding	principal1	9	-1	107231909	9063
ENSMUSG00000117206	processed_pseudogene	Gm49809	ENSMUST00000233132	processed_pseudogene		17	1	9947837	461
ENSMUSG00000035208	protein_coding	Slfn8	ENSMUST00000130822	protein_coding		11	-1	83020108	2128
ENSMUSG00000085774	antisense	Gm13055	ENSMUST00000127875	antisense		4	-1	141266016	1961
ENSMUSG00000035208	protein_coding	Slfn8	ENSMUST00000131883	protein_coding		11	-1	83017180	1252
ENSMUSG00000030935	protein_coding	Acsm3	ENSMUST00000106527	protein_coding	principal1	7	1	119760923	2557
ENSMUSG00000035208	protein_coding	Slfn8	ENSMUST00000108152	protein_coding		11	-1	83020722	3083
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000171095	protein_coding		9	-1	106913154	3947
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000166152	protein_coding		9	-1	106901779	263
ENSMUSG00000112585	unprocessed_pseudogene	Gm47527	ENSMUST00000220155	unprocessed_pseudogene		10	1	81679122	296
ENSMUSG00000095670	protein_coding	Vmn1r30	ENSMUST00000228577	protein_coding	principal1	6	-1	58441318	1968
ENSMUSG00000079555	protein_coding	Haus3	ENSMUST00000060049	protein_coding	principal1	5	-1	34169527	2073
ENSMUSG00000095670	protein_coding	Vmn1r30	ENSMUST00000227466	protein_coding	principal1	6	-1	58441318	1798
ENSMUSG00000112001	processed_pseudogene	Gm8112	ENSMUST00000219637	processed_pseudogene		10	-1	81694185	465
ENSMUSG00000095670	protein_coding	Vmn1r30	ENSMUST00000226334	protein_coding	principal1	6	-1	58443385	1946
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000165562	processed_transcript		9	-1	106908785	453
ENSMUSG00000095670	protein_coding	Vmn1r30	ENSMUST00000228635	protein_coding	principal1	6	-1	58443385	1776
ENSMUSG00000079555	protein_coding	Haus3	ENSMUST00000201069	retained_intron		5	-1	34169448	3565
ENSMUSG00000001333	protein_coding	Sync	ENSMUST00000102599	protein_coding	principal1	4	1	129287617	2042
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000166759	retained_intron		9	-1	106913456	679
ENSMUSG00000030935	protein_coding	Acsm3	ENSMUST00000063770	protein_coding	principal1	7	1	119760924	2651
ENSMUSG00000095670	protein_coding	Vmn1r30	ENSMUST00000078890	protein_coding	principal1	6	-1	58435894	1053
ENSMUSG00000079555	protein_coding	Haus3	ENSMUST00000201042	processed_transcript		5	-1	34163712	279
ENSMUSG00000034042	protein_coding	Gpbp1l1	ENSMUST00000030460	protein_coding	principal1	4	1	116557658	3588
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000168759	protein_coding		9	-1	106952340	723
ENSMUSG00000054321	protein_coding	Taf4b	ENSMUST00000234789	protein_coding	alternative2	18	1	14783245	5134
ENSMUSG00000107518	processed_pseudogene	Gm44016	ENSMUST00000203463	processed_pseudogene		6	-1	58438858	164
ENSMUSG00000079555	protein_coding	Haus3	ENSMUST00000202290	processed_transcript		5	-1	34169452	390
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000165075	protein_coding		9	-1	106967201	723
ENSMUSG00000054321	protein_coding	Taf4b	ENSMUST00000169862	protein_coding	principal2	18	1	14783245	5149
ENSMUSG00000079555	protein_coding	Haus3	ENSMUST00000202042	protein_coding		5	-1	34169503	618
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000170193	retained_intron		9	-1	107025391	529
ENSMUSG00000030935	protein_coding	Acsm3	ENSMUST00000106529	protein_coding		7	1	119760924	3295
ENSMUSG00000034042	protein_coding	Gpbp1l1	ENSMUST00000106475	protein_coding	principal1	4	1	116558079	2642
ENSMUSG00000001333	protein_coding	Sync	ENSMUST00000146448	retained_intron		4	1	129287631	2330
ENSMUSG00000079555	protein_coding	Haus3	ENSMUST00000202541	protein_coding		5	-1	34169433	375
ENSMUSG00000030935	protein_coding	Acsm3	ENSMUST00000106526	protein_coding	principal1	7	1	119766371	2704
ENSMUSG00000117530	processed_pseudogene	Gm21055	ENSMUST00000234669	processed_pseudogene		18	1	14830668	368
ENSMUSG00000034042	protein_coding	Gpbp1l1	ENSMUST00000131913	processed_transcript		4	1	116578799	714
ENSMUSG00000106771	processed_pseudogene	Gm43459	ENSMUST00000202093	processed_pseudogene		5	1	34096704	331
ENSMUSG00000082235	processed_pseudogene	Gm13326	ENSMUST00000118730	processed_pseudogene		2	-1	16979831	1011
ENSMUSG00000034042	protein_coding	Gpbp1l1	ENSMUST00000138837	processed_transcript		4	1	116581353	448
ENSMUSG00000100205	processed_pseudogene	Gm4850	ENSMUST00000185684	processed_pseudogene		1	1	31267326	559
ENSMUSG00000045102	protein_coding	Poln	ENSMUST00000202825	processed_transcript		5	-1	34013562	392
ENSMUSG00000031738	protein_coding	Irx6	ENSMUST00000034185	protein_coding	principal3	8	1	92674288	3370
ENSMUSG00000014547	protein_coding	Wdfy2	ENSMUST00000014691	protein_coding	principal1	14	1	62837678	6646
ENSMUSG00000113363	lincRNA	Gm48187	ENSMUST00000221441	lincRNA		12	1	12865570	491
ENSMUSG00000100592	processed_pseudogene	Gm28645	ENSMUST00000185859	processed_pseudogene		1	1	31274892	564
ENSMUSG00000118022	processed_pseudogene	Prdx1-ps	ENSMUST00000237134	processed_pseudogene		18	-1	64220522	588
ENSMUSG00000081525	processed_pseudogene	Gm13325	ENSMUST00000118746	processed_pseudogene		2	1	17169225	806
ENSMUSG00000030935	protein_coding	Acsm3	ENSMUST00000149766	retained_intron		7	1	119774544	1325
ENSMUSG00000118264	transcribed_processed_pseudogene	Rps15-ps3	ENSMUST00000235877	processed_transcript		18	1	64288135	780
ENSMUSG00000118264	transcribed_processed_pseudogene	Rps15-ps3	ENSMUST00000235992	transcribed_processed_pseudogene		18	1	64288358	443
ENSMUSG00000118264	transcribed_processed_pseudogene	Rps15-ps3	ENSMUST00000235716	processed_transcript		18	1	64289013	390
ENSMUSG00000070546	protein_coding	Mrgprb3	ENSMUST00000094383	protein_coding	principal1	7	-1	48643811	1009
ENSMUSG00000014547	protein_coding	Wdfy2	ENSMUST00000224948	retained_intron		14	1	62837714	3080
ENSMUSG00000045102	protein_coding	Poln	ENSMUST00000201251	processed_transcript		5	-1	34051117	529
ENSMUSG00000031738	protein_coding	Irx6	ENSMUST00000167261	protein_coding	alternative2	8	1	92674826	2829
ENSMUSG00000109858	protein_coding	Pfn5	ENSMUST00000210331	protein_coding	principal1	X	1	95558104	700
ENSMUSG00000025574	protein_coding	Tk1	ENSMUST00000026661	protein_coding	principal1	11	-1	117826092	1440
ENSMUSG00000094215	processed_pseudogene	Gm6489	ENSMUST00000178167	processed_pseudogene		1	1	31286945	696
ENSMUSG00000062526	protein_coding	Mppe1	ENSMUST00000073054	protein_coding	principal1	18	-1	67245830	2494
ENSMUSG00000110023	antisense	Gm45505	ENSMUST00000210252	antisense		8	-1	92682194	948
ENSMUSG00000030935	protein_coding	Acsm3	ENSMUST00000149598	retained_intron		7	1	119777046	488
ENSMUSG00000029283	protein_coding	Cdc7	ENSMUST00000117196	protein_coding	alternative2	5	1	106964322	2864
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000167053	retained_intron		9	-1	107231868	5440
ENSMUSG00000114403	processed_pseudogene	Gm21021	ENSMUST00000225378	processed_pseudogene		14	1	62973790	1186
ENSMUSG00000030935	protein_coding	Acsm3	ENSMUST00000154828	retained_intron		7	1	119780736	229
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000169164	retained_intron		9	-1	107231856	920
ENSMUSG00000045980	protein_coding	Tmem104	ENSMUST00000100235	protein_coding	alternative1	11	1	115187487	4561
ENSMUSG00000039716	protein_coding	Dock3	ENSMUST00000165182	retained_intron		9	-1	107231582	529
ENSMUSG00000025574	protein_coding	Tk1	ENSMUST00000141939	retained_intron		11	-1	117816654	724
ENSMUSG00000090207	antisense	4930524O07Rik	ENSMUST00000193135	antisense		9	1	106891547	2289
ENSMUSG00000023092	protein_coding	Fhl1	ENSMUST00000023854	protein_coding	principal3	X	1	56731787	2356
ENSMUSG00000030935	protein_coding	Acsm3	ENSMUST00000106528	protein_coding	principal1	7	1	119760923	2755
ENSMUSG00000029335	protein_coding	Bmp3	ENSMUST00000197143	protein_coding		5	1	98854415	2739
ENSMUSG00000090207	antisense	4930524O07Rik	ENSMUST00000161822	antisense		9	1	106892171	1050
ENSMUSG00000027077	protein_coding	Smtnl1	ENSMUST00000028471	protein_coding	principal1	2	-1	84822652	1761
ENSMUSG00000045980	protein_coding	Tmem104	ENSMUST00000156230	processed_transcript		11	1	115187551	3147
ENSMUSG00000025574	protein_coding	Tk1	ENSMUST00000153872	retained_intron		11	-1	117817424	678
ENSMUSG00000075574	protein_coding	Defb48	ENSMUST00000100493	protein_coding	principal1	14	-1	62984510	445
ENSMUSG00000090207	antisense	4930524O07Rik	ENSMUST00000162334	antisense		9	1	106892613	293
ENSMUSG00000045980	protein_coding	Tmem104	ENSMUST00000135536	processed_transcript		11	1	115187511	369
ENSMUSG00000025574	protein_coding	Tk1	ENSMUST00000154790	retained_intron		11	-1	117825837	786
ENSMUSG00000050103	protein_coding	Agmo	ENSMUST00000049874	protein_coding	principal1	12	1	37241641	2423
ENSMUSG00000045980	protein_coding	Tmem104	ENSMUST00000061450	protein_coding	principal2	11	1	115187487	4564
ENSMUSG00000025574	protein_coding	Tk1	ENSMUST00000153298	retained_intron		11	-1	117825867	659
ENSMUSG00000062526	protein_coding	Mppe1	ENSMUST00000236244	retained_intron		18	-1	67245277	2511
ENSMUSG00000112339	processed_pseudogene	Gm47529	ENSMUST00000219027	processed_pseudogene		10	-1	81717557	331
ENSMUSG00000075573	protein_coding	Defb47	ENSMUST00000100492	protein_coding	principal1	14	1	62998077	359
ENSMUSG00000025574	protein_coding	Tk1	ENSMUST00000129852	retained_intron		11	-1	117825847	2490
ENSMUSG00000050103	protein_coding	Agmo	ENSMUST00000160768	protein_coding		12	1	37241750	741
ENSMUSG00000062526	protein_coding	Mppe1	ENSMUST00000237279	retained_intron		18	-1	67245667	2046
ENSMUSG00000096795	protein_coding	Zfp433	ENSMUST00000200889	protein_coding	principal1	10	1	81704825	2384
ENSMUSG00000025574	protein_coding	Tk1	ENSMUST00000150027	retained_intron		11	-1	117825817	903
ENSMUSG00000096795	protein_coding	Zfp433	ENSMUST00000201819	protein_coding		10	1	81704878	771
ENSMUSG00000005575	protein_coding	Ube2m	ENSMUST00000138357	retained_intron		7	-1	13037746	1338
ENSMUSG00000083556	unprocessed_pseudogene	Gm9043	ENSMUST00000119677	unprocessed_pseudogene		X	1	95629832	314
ENSMUSG00000062526	protein_coding	Mppe1	ENSMUST00000237631	protein_coding		18	-1	67245441	341
ENSMUSG00000029335	protein_coding	Bmp3	ENSMUST00000031278	protein_coding	principal1	5	1	98854439	6548
ENSMUSG00000050103	protein_coding	Agmo	ENSMUST00000160158	retained_intron		12	1	37241779	3155
ENSMUSG00000096795	protein_coding	Zfp433	ENSMUST00000201114	processed_transcript		10	1	81721483	733
ENSMUSG00000023092	protein_coding	Fhl1	ENSMUST00000114769	protein_coding		X	1	56731865	2770
ENSMUSG00000096795	protein_coding	Zfp433	ENSMUST00000085664	protein_coding		10	1	81718919	1800
ENSMUSG00000117757	antisense	Gm50169	ENSMUST00000209359	antisense		18	-1	67205970	2636
ENSMUSG00000050103	protein_coding	Agmo	ENSMUST00000159998	nonsense_mediated_decay		12	1	37241860	2114
ENSMUSG00000112061	processed_pseudogene	Gm8249	ENSMUST00000219225	processed_pseudogene		10	1	81715945	465
ENSMUSG00000050103	protein_coding	Agmo	ENSMUST00000160390	protein_coding		12	1	37242042	2194
ENSMUSG00000101551	processed_pseudogene	Gm8870	ENSMUST00000188170	processed_pseudogene		1	-1	71156020	775
ENSMUSG00000029335	protein_coding	Bmp3	ENSMUST00000200388	protein_coding		5	1	98854451	6609
ENSMUSG00000023092	protein_coding	Fhl1	ENSMUST00000116596	protein_coding	principal3	X	1	56732129	1203
ENSMUSG00000020808	protein_coding	Pimreg	ENSMUST00000021164	protein_coding	principal1	11	1	72042455	1513
ENSMUSG00000050103	protein_coding	Agmo	ENSMUST00000221949	processed_transcript		12	1	37445185	869
ENSMUSG00000027411	protein_coding	Vps16	ENSMUST00000128994	protein_coding		2	1	130424365	978
ENSMUSG00000112621	processed_pseudogene	Gm5173	ENSMUST00000219616	processed_pseudogene		10	1	81727923	950
ENSMUSG00000113005	antisense	Gm34408	ENSMUST00000222104	antisense		12	-1	37475031	655
ENSMUSG00000075572	protein_coding	Defb43	ENSMUST00000100491	protein_coding	principal1	14	1	63011771	408
ENSMUSG00000114007	processed_pseudogene	Gm48660	ENSMUST00000221458	processed_pseudogene		12	1	37569279	282
ENSMUSG00000020808	protein_coding	Pimreg	ENSMUST00000133880	processed_transcript		11	1	72042524	747
ENSMUSG00000020808	protein_coding	Pimreg	ENSMUST00000125655	protein_coding		11	1	72042922	476
ENSMUSG00000114260	processed_pseudogene	Gm19198	ENSMUST00000224334	processed_pseudogene		14	-1	63025897	768
ENSMUSG00000056812	protein_coding	St8sia3	ENSMUST00000025477	protein_coding	principal1	18	1	64254359	9747
ENSMUSG00000111055	lincRNA	D030034A15Rik	ENSMUST00000215835	lincRNA		10	-1	39173252	3953
ENSMUSG00000020808	protein_coding	Pimreg	ENSMUST00000127369	processed_transcript		11	1	72042502	681
ENSMUSG00000111877	processed_pseudogene	Gm6477	ENSMUST00000217098	processed_pseudogene		10	1	39198538	764
ENSMUSG00000094622	protein_coding	Gm3055	ENSMUST00000218939	protein_coding	principal1	10	-1	81771142	4067
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225073	retained_intron		8	-1	57315124	1351
ENSMUSG00000094622	protein_coding	Gm3055	ENSMUST00000219864	protein_coding		10	-1	81771161	625
ENSMUSG00000094622	protein_coding	Gm3055	ENSMUST00000105316	protein_coding		10	-1	81747503	720
ENSMUSG00000056812	protein_coding	St8sia3	ENSMUST00000237770	protein_coding	principal1	18	1	64263655	3296
ENSMUSG00000112877	unprocessed_pseudogene	Gm47537	ENSMUST00000218272	unprocessed_pseudogene		10	1	81804432	304
ENSMUSG00000029283	protein_coding	Cdc7	ENSMUST00000031221	protein_coding	principal3	5	1	106964322	2961
ENSMUSG00000020808	protein_coding	Pimreg	ENSMUST00000122871	protein_coding		11	1	72042032	541
ENSMUSG00000111008	lincRNA	Gm31562	ENSMUST00000213973	lincRNA		10	1	39245046	2747
ENSMUSG00000056812	protein_coding	St8sia3	ENSMUST00000237956	processed_transcript		18	1	64264619	253
ENSMUSG00000082194	processed_pseudogene	Gm12444	ENSMUST00000121512	processed_pseudogene		4	-1	46243890	877
ENSMUSG00000029283	protein_coding	Cdc7	ENSMUST00000076467	protein_coding		5	1	106964381	2785
ENSMUSG00000056812	protein_coding	St8sia3	ENSMUST00000139622	processed_transcript		18	1	64265986	1523
ENSMUSG00000021221	protein_coding	Dpf3	ENSMUST00000147469	protein_coding		12	-1	83350895	2940
ENSMUSG00000056812	protein_coding	St8sia3	ENSMUST00000134064	processed_transcript		18	1	64266177	673
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225995	retained_intron		8	-1	57315834	1946
ENSMUSG00000020514	protein_coding	Mrpl22	ENSMUST00000020820	protein_coding	principal1	11	1	58171661	722
ENSMUSG00000056812	protein_coding	St8sia3	ENSMUST00000237474	processed_transcript		18	1	64266388	463
ENSMUSG00000021221	protein_coding	Dpf3	ENSMUST00000144237	protein_coding		12	-1	83350895	1296
ENSMUSG00000056812	protein_coding	St8sia3	ENSMUST00000129518	retained_intron		18	1	64266808	745
ENSMUSG00000020514	protein_coding	Mrpl22	ENSMUST00000133038	processed_transcript		11	1	58171676	525
ENSMUSG00000020514	protein_coding	Mrpl22	ENSMUST00000140997	processed_transcript		11	1	58171689	484
ENSMUSG00000057236	protein_coding	Rbbp4	ENSMUST00000102598	protein_coding	principal1	4	-1	129335370	4407
ENSMUSG00000021221	protein_coding	Dpf3	ENSMUST00000133282	protein_coding		12	-1	83350895	1105
ENSMUSG00000109109	TEC	Gm44953	ENSMUST00000208745	TEC		7	1	100811352	1286
ENSMUSG00000022335	protein_coding	Zfat	ENSMUST00000162054	protein_coding	alternative2	15	-1	68258856	4388
ENSMUSG00000109035	processed_pseudogene	Gm45209	ENSMUST00000207122	processed_pseudogene		7	-1	100738628	353
ENSMUSG00000059355	protein_coding	Wdr83os	ENSMUST00000079764	protein_coding	principal1	8	1	85080740	922
ENSMUSG00000031232	protein_coding	Magt1	ENSMUST00000151689	protein_coding	alternative2	X	-1	106011906	4531
ENSMUSG00000021221	protein_coding	Dpf3	ENSMUST00000140327	protein_coding		12	-1	83294428	587
ENSMUSG00000086128	antisense	St8sia3os	ENSMUST00000127716	antisense		18	-1	64277180	667
ENSMUSG00000086128	antisense	St8sia3os	ENSMUST00000236604	antisense		18	-1	64168774	374
ENSMUSG00000057236	protein_coding	Rbbp4	ENSMUST00000140291	processed_transcript		4	-1	129334644	722
ENSMUSG00000086128	antisense	St8sia3os	ENSMUST00000235267	antisense		18	-1	64168804	308
ENSMUSG00000027610	protein_coding	Gss	ENSMUST00000079691	protein_coding	principal1	2	-1	155592810	1963
ENSMUSG00000086128	antisense	St8sia3os	ENSMUST00000237973	antisense		18	-1	64277165	770
ENSMUSG00000057236	protein_coding	Rbbp4	ENSMUST00000147183	retained_intron		4	-1	129335249	4663
ENSMUSG00000059355	protein_coding	Wdr83os	ENSMUST00000148592	retained_intron		8	1	85080973	798
ENSMUSG00000086128	antisense	St8sia3os	ENSMUST00000235475	antisense		18	-1	64333706	1205
ENSMUSG00000031232	protein_coding	Magt1	ENSMUST00000113566	protein_coding	alternative2	X	-1	106011786	1608
ENSMUSG00000059355	protein_coding	Wdr83os	ENSMUST00000140621	protein_coding		8	1	85080988	630
ENSMUSG00000029283	protein_coding	Cdc7	ENSMUST00000140378	retained_intron		5	1	106964392	3679
ENSMUSG00000031232	protein_coding	Magt1	ENSMUST00000139421	protein_coding	alternative2	X	-1	106011780	1059
ENSMUSG00000057236	protein_coding	Rbbp4	ENSMUST00000135585	protein_coding		4	-1	129335083	392
ENSMUSG00000021221	protein_coding	Dpf3	ENSMUST00000178756	protein_coding	principal1	12	-1	83487716	3135
ENSMUSG00000029283	protein_coding	Cdc7	ENSMUST00000118261	protein_coding	principal3	5	1	106964561	3129
ENSMUSG00000027610	protein_coding	Gss	ENSMUST00000130881	protein_coding		2	-1	155592714	1724
ENSMUSG00000086128	antisense	St8sia3os	ENSMUST00000140903	antisense		18	-1	64277180	383
ENSMUSG00000005575	protein_coding	Ube2m	ENSMUST00000005714	protein_coding	principal1	7	-1	13038273	1472
ENSMUSG00000021221	protein_coding	Dpf3	ENSMUST00000177959	protein_coding		12	-1	83487708	1298
ENSMUSG00000023092	protein_coding	Fhl1	ENSMUST00000114773	protein_coding		X	1	56779437	2298
ENSMUSG00000020321	protein_coding	Mdh1	ENSMUST00000102874	protein_coding	principal1	11	-1	21572193	2122
ENSMUSG00000027610	protein_coding	Gss	ENSMUST00000175993	protein_coding		2	-1	155573004	756
ENSMUSG00000086128	antisense	St8sia3os	ENSMUST00000123473	antisense		18	-1	64277171	652
ENSMUSG00000029283	protein_coding	Cdc7	ENSMUST00000129938	nonsense_mediated_decay		5	1	106965018	1854
ENSMUSG00000086128	antisense	St8sia3os	ENSMUST00000124013	antisense		18	-1	64277157	296
ENSMUSG00000062061	protein_coding	Obp2a	ENSMUST00000077667	protein_coding	principal1	2	1	25700043	744
ENSMUSG00000029283	protein_coding	Cdc7	ENSMUST00000199223	processed_transcript		5	1	106974546	647
ENSMUSG00000031232	protein_coding	Magt1	ENSMUST00000238718	protein_coding	principal2	X	-1	106011899	4524
ENSMUSG00000005575	protein_coding	Ube2m	ENSMUST00000131837	retained_intron		7	-1	13037647	851
ENSMUSG00000020321	protein_coding	Mdh1	ENSMUST00000238916	protein_coding		11	-1	21572193	2122
ENSMUSG00000118191	transcribed_processed_pseudogene	Gm45934	ENSMUST00000235473	transcribed_processed_pseudogene		18	-1	64200527	313
ENSMUSG00000029283	protein_coding	Cdc7	ENSMUST00000123546	retained_intron		5	1	106975238	641
ENSMUSG00000031232	protein_coding	Magt1	ENSMUST00000033583	protein_coding	principal2	X	-1	106011899	4115
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000224717	retained_intron		8	-1	57320056	1298
ENSMUSG00000020321	protein_coding	Mdh1	ENSMUST00000146146	processed_transcript		11	-1	21559729	600
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000186386	antisense		8	-1	57320744	762
ENSMUSG00000111183	lincRNA	Gm48486	ENSMUST00000215530	lincRNA		10	-1	39323417	858
ENSMUSG00000005575	protein_coding	Ube2m	ENSMUST00000125964	protein_coding		7	-1	13037627	801
ENSMUSG00000021221	protein_coding	Dpf3	ENSMUST00000177801	protein_coding		12	-1	83439920	1092
ENSMUSG00000022335	protein_coding	Zfat	ENSMUST00000162173	protein_coding	alternative2	15	-1	68258787	3561
ENSMUSG00000093461	unprocessed_pseudogene	Vmn1r-ps21	ENSMUST00000176891	unprocessed_pseudogene		6	-1	58455993	925
ENSMUSG00000027610	protein_coding	Gss	ENSMUST00000140860	retained_intron		2	-1	155574383	3258
ENSMUSG00000023092	protein_coding	Fhl1	ENSMUST00000114772	protein_coding	alternative1	X	1	56779723	2283
ENSMUSG00000020321	protein_coding	Mdh1	ENSMUST00000144978	processed_transcript		11	-1	21564207	644
ENSMUSG00000005575	protein_coding	Ube2m	ENSMUST00000123541	protein_coding		7	-1	13036648	544
ENSMUSG00000027610	protein_coding	Gss	ENSMUST00000126322	protein_coding		2	-1	155582662	777
ENSMUSG00000118165	processed_pseudogene	Gm3621	ENSMUST00000237523	processed_pseudogene		19	1	28973039	812
ENSMUSG00000081483	processed_pseudogene	Gm12445	ENSMUST00000117947	processed_pseudogene		4	-1	46274840	885
ENSMUSG00000020321	protein_coding	Mdh1	ENSMUST00000125302	protein_coding		11	-1	21572367	549
ENSMUSG00000117364	lincRNA	4933400B14Rik	ENSMUST00000234989	lincRNA		17	1	89320227	978
ENSMUSG00000023092	protein_coding	Fhl1	ENSMUST00000114768	protein_coding		X	1	56779730	1337
ENSMUSG00000023092	protein_coding	Fhl1	ENSMUST00000155882	protein_coding		X	1	56779819	334
ENSMUSG00000020321	protein_coding	Mdh1	ENSMUST00000239073	protein_coding	principal1	11	-1	21571934	1958
ENSMUSG00000022335	protein_coding	Zfat	ENSMUST00000160248	protein_coding	principal4	15	-1	68258838	3866
ENSMUSG00000117524	lincRNA	Gm4719	ENSMUST00000234513	lincRNA		17	1	89379241	801
ENSMUSG00000084004	processed_pseudogene	Gm12047	ENSMUST00000117561	processed_pseudogene		11	-1	21877950	944
ENSMUSG00000023092	protein_coding	Fhl1	ENSMUST00000144600	protein_coding		X	1	56786527	786
ENSMUSG00000005575	protein_coding	Ube2m	ENSMUST00000156389	processed_transcript		7	-1	13038273	415
ENSMUSG00000005575	protein_coding	Ube2m	ENSMUST00000126827	processed_transcript		7	-1	13037521	401
ENSMUSG00000093747	processed_pseudogene	Gm20673	ENSMUST00000177167	processed_pseudogene		6	1	58461107	430
ENSMUSG00000023092	protein_coding	Fhl1	ENSMUST00000151033	protein_coding		X	1	56787725	406
ENSMUSG00000107960	lincRNA	Gm35077	ENSMUST00000204999	lincRNA		6	-1	58521810	275
ENSMUSG00000117511	lincRNA	Gm50061	ENSMUST00000234973	lincRNA		17	-1	89752526	815
ENSMUSG00000022335	protein_coding	Zfat	ENSMUST00000159430	processed_transcript		15	-1	68258847	2021
ENSMUSG00000023092	protein_coding	Fhl1	ENSMUST00000153401	processed_transcript		X	1	56787998	773
ENSMUSG00000020319	protein_coding	Wdpcp	ENSMUST00000156624	processed_transcript		11	1	21695129	963
ENSMUSG00000093741	processed_pseudogene	Gm20672	ENSMUST00000176605	processed_pseudogene		6	1	58512271	261
ENSMUSG00000022335	protein_coding	Zfat	ENSMUST00000161139	retained_intron		15	-1	68258849	3240
ENSMUSG00000093518	unprocessed_pseudogene	Vmn1r-ps22	ENSMUST00000176017	unprocessed_pseudogene		6	-1	58495247	900
ENSMUSG00000115025	processed_pseudogene	Gm4240	ENSMUST00000226708	processed_pseudogene		14	1	70302207	571
ENSMUSG00000093588	unprocessed_pseudogene	Vmn1r-ps23	ENSMUST00000175708	unprocessed_pseudogene		6	-1	58504737	295
ENSMUSG00000091470	unprocessed_pseudogene	Gm17159	ENSMUST00000169043	unprocessed_pseudogene		14	-1	41611107	482
ENSMUSG00000005575	protein_coding	Ube2m	ENSMUST00000165394	protein_coding		7	-1	13038275	1228
ENSMUSG00000055254	protein_coding	Ntrk2	ENSMUST00000225488	protein_coding	principal1	13	1	58806569	4706
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000224385	protein_coding		18	1	64888991	735
ENSMUSG00000027610	protein_coding	Gss	ENSMUST00000176415	processed_transcript		2	-1	155592727	834
ENSMUSG00000104598	antisense	Gm30214	ENSMUST00000199271	antisense		14	-1	53039466	1383
ENSMUSG00000055254	protein_coding	Ntrk2	ENSMUST00000225119	processed_transcript		13	1	58806590	356
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000223959	processed_transcript		18	1	64889015	414
ENSMUSG00000115404	protein_coding	Vmn1r31	ENSMUST00000177318	protein_coding	principal2	6	-1	58475330	2076
ENSMUSG00000027610	protein_coding	Gss	ENSMUST00000157008	retained_intron		2	-1	155587576	897
ENSMUSG00000085193	lincRNA	Gm13322	ENSMUST00000152803	lincRNA		2	-1	17185487	246
ENSMUSG00000025911	protein_coding	Adhfe1	ENSMUST00000144177	protein_coding	principal1	1	1	9547948	3239
ENSMUSG00000011257	protein_coding	Pabpc4	ENSMUST00000156807	processed_transcript		4	1	123262351	245
ENSMUSG00000067577	processed_transcript	A430093F15Rik	ENSMUST00000186596	lincRNA		19	1	10740947	2115
ENSMUSG00000066878	protein_coding	Gm10184	ENSMUST00000086423	protein_coding	principal1	17	-1	89910449	1988
ENSMUSG00000104277	TEC	Gm38299	ENSMUST00000193214	TEC		2	-1	33002315	3789
ENSMUSG00000091657	protein_coding	Gm3072	ENSMUST00000167712	protein_coding	principal1	14	-1	41624612	1395
ENSMUSG00000095643	TR_V_gene	Trav13d-3	ENSMUST00000179512	TR_V_gene	principal1	14	1	53032848	391
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000163516	protein_coding		18	1	64889029	7787
ENSMUSG00000027610	protein_coding	Gss	ENSMUST00000155347	protein_coding		2	-1	155592567	1094
ENSMUSG00000117635	lincRNA	Gm41653	ENSMUST00000234603	lincRNA		17	-1	89976785	1723
ENSMUSG00000067577	processed_transcript	A430093F15Rik	ENSMUST00000087947	lincRNA		19	1	10740951	985
ENSMUSG00000091146	unprocessed_pseudogene	Gm3077	ENSMUST00000165903	unprocessed_pseudogene		14	-1	41633816	627
ENSMUSG00000017718	protein_coding	Afmid	ENSMUST00000073388	protein_coding	principal1	11	1	117825924	2327
ENSMUSG00000097627	lincRNA	4930519A11Rik	ENSMUST00000181381	lincRNA		12	1	12902720	1523
ENSMUSG00000027610	protein_coding	Gss	ENSMUST00000137305	processed_transcript		2	-1	155582654	702
ENSMUSG00000115404	protein_coding	Vmn1r31	ENSMUST00000176147	protein_coding	alternative2	6	-1	58475330	1969
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000237384	protein_coding		18	1	64890493	3592
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000224792	retained_intron		8	-1	57315402	1314
ENSMUSG00000076795	TR_V_gene	Trav8d-2	ENSMUST00000198439	TR_V_gene	principal5	14	1	53042428	337
ENSMUSG00000097627	lincRNA	4930519A11Rik	ENSMUST00000221053	lincRNA		12	1	12904550	667
ENSMUSG00000115404	protein_coding	Vmn1r31	ENSMUST00000176023	protein_coding	alternative2	6	-1	58475330	1930
ENSMUSG00000067577	processed_transcript	A430093F15Rik	ENSMUST00000188480	lincRNA		19	1	10740960	509
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000185946	antisense		8	-1	57320325	668
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000224148	antisense		8	-1	57320394	933
ENSMUSG00000076795	TR_V_gene	Trav8d-2	ENSMUST00000103605	TR_V_gene	alternative2	14	1	53042428	334
ENSMUSG00000060038	protein_coding	Dhps	ENSMUST00000078665	protein_coding	principal1	8	1	85071757	1333
ENSMUSG00000115404	protein_coding	Vmn1r31	ENSMUST00000228586	protein_coding	principal2	6	-1	58475330	2115
ENSMUSG00000100251	unprocessed_pseudogene	Gm29615	ENSMUST00000185371	unprocessed_pseudogene		Y	-1	74078799	697
ENSMUSG00000067577	processed_transcript	A430093F15Rik	ENSMUST00000185446	retained_intron		19	1	10748037	938
ENSMUSG00000017718	protein_coding	Afmid	ENSMUST00000149668	protein_coding		11	1	117825974	1583
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000236898	protein_coding		18	1	64921117	3034
ENSMUSG00000079269	protein_coding	Gm3676	ENSMUST00000111869	protein_coding	principal1	14	-1	41646487	899
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000237410	protein_coding		18	1	64921117	2974
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000185793	antisense		8	-1	57320404	486
ENSMUSG00000055254	protein_coding	Ntrk2	ENSMUST00000224259	protein_coding		13	1	58806639	3049
ENSMUSG00000115404	protein_coding	Vmn1r31	ENSMUST00000226390	protein_coding	principal2	6	-1	58472878	912
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225516	antisense		8	-1	57320413	595
ENSMUSG00000066629	processed_pseudogene	Rpl36-ps3	ENSMUST00000085720	processed_pseudogene		12	1	12912022	315
ENSMUSG00000001403	protein_coding	Ube2c	ENSMUST00000088248	protein_coding	principal1	2	1	164769898	967
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000189169	antisense		8	-1	57320735	877
ENSMUSG00000017718	protein_coding	Afmid	ENSMUST00000153850	retained_intron		11	1	117825981	345
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000224827	antisense		8	-1	57320744	928
ENSMUSG00000067577	processed_transcript	A430093F15Rik	ENSMUST00000189565	lincRNA		19	1	10781915	651
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000224153	antisense		8	-1	57320859	1147
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000223675	antisense		8	-1	57321228	1171
ENSMUSG00000113465	lincRNA	Gm40271	ENSMUST00000221752	lincRNA		12	1	12909428	422
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000224516	retained_intron		18	1	64921129	1045
ENSMUSG00000042579	lincRNA	4632404H12Rik	ENSMUST00000038450	lincRNA		3	-1	89773240	2791
ENSMUSG00000067577	processed_transcript	A430093F15Rik	ENSMUST00000186052	retained_intron		19	1	10785352	551
ENSMUSG00000076796	TR_V_gene	Trav16d-dv11	ENSMUST00000103606	TR_V_gene	principal1	14	1	53047287	353
ENSMUSG00000042579	lincRNA	4632404H12Rik	ENSMUST00000195940	lincRNA		3	-1	89772791	4671
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000238122	processed_transcript		18	1	64976831	373
ENSMUSG00000020439	protein_coding	Smtn	ENSMUST00000110011	protein_coding	alternative2	11	-1	3537398	3020
ENSMUSG00000001403	protein_coding	Ube2c	ENSMUST00000001439	protein_coding		2	1	164769903	2191
ENSMUSG00000091281	unprocessed_pseudogene	Gm8065	ENSMUST00000164048	unprocessed_pseudogene		14	1	41673751	605
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000186214	antisense		8	-1	57305358	633
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000223980	antisense		8	-1	57320280	575
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000189143	antisense		8	-1	57320830	517
ENSMUSG00000107355	lincRNA	AI839979	ENSMUST00000201790	lincRNA		5	-1	31571397	1539
ENSMUSG00000055254	protein_coding	Ntrk2	ENSMUST00000079828	protein_coding	principal1	13	1	58807697	8744
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225999	retained_intron		8	-1	57308704	2700
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225291	retained_intron		8	-1	57320441	1418
ENSMUSG00000037904	protein_coding	Ankrd9	ENSMUST00000128353	protein_coding	principal2	12	-1	110979040	2577
ENSMUSG00000095518	protein_coding	Gm8068	ENSMUST00000167440	protein_coding	principal1	14	-1	41701885	1402
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000080418	protein_coding		18	1	65023549	3671
ENSMUSG00000025911	protein_coding	Adhfe1	ENSMUST00000027044	nonsense_mediated_decay		1	1	9548055	2022
ENSMUSG00000055254	protein_coding	Ntrk2	ENSMUST00000224402	protein_coding		13	1	58807878	2284
ENSMUSG00000085037	processed_transcript	4933421O10Rik	ENSMUST00000155691	processed_transcript		4	-1	33031323	3847
ENSMUSG00000017718	protein_coding	Afmid	ENSMUST00000139945	retained_intron		11	1	117832104	827
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000226014	retained_intron		8	-1	57320859	1688
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000223828	retained_intron		8	-1	57311647	1310
ENSMUSG00000116480	sense_intronic	Gm49512	ENSMUST00000230620	sense_intronic		15	1	80712271	344
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225887	retained_intron		8	-1	57320571	1643
ENSMUSG00000025911	protein_coding	Adhfe1	ENSMUST00000130927	nonsense_mediated_decay		1	1	9548092	459
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225650	retained_intron		8	-1	57320671	1776
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000237854	protein_coding		18	1	65023683	4845
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000223626	retained_intron		8	-1	57320757	1471
ENSMUSG00000037904	protein_coding	Ankrd9	ENSMUST00000148765	protein_coding	principal2	12	-1	110978255	1431
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000223799	retained_intron		8	-1	57314648	1152
ENSMUSG00000091740	protein_coding	Gm7929	ENSMUST00000224730	protein_coding		14	-1	41750614	810
ENSMUSG00000091740	protein_coding	Gm7929	ENSMUST00000178711	protein_coding	principal1	14	-1	41750595	624
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225862	antisense		8	-1	57320285	482
ENSMUSG00000025911	protein_coding	Adhfe1	ENSMUST00000186467	nonsense_mediated_decay		1	1	9548107	466
ENSMUSG00000055254	protein_coding	Ntrk2	ENSMUST00000109838	protein_coding		13	1	58808281	6846
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000187461	antisense		8	-1	57320767	513
ENSMUSG00000107355	lincRNA	AI839979	ENSMUST00000200738	lincRNA		5	-1	31571391	654
ENSMUSG00000037904	protein_coding	Ankrd9	ENSMUST00000140788	protein_coding	principal2	12	-1	110978618	1451
ENSMUSG00000101774	lincRNA	Gm29616	ENSMUST00000188777	lincRNA		Y	1	74118552	1499
ENSMUSG00000017718	protein_coding	Afmid	ENSMUST00000148016	retained_intron		11	1	117832230	1571
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000185635	retained_intron		8	-1	57320748	644
ENSMUSG00000017718	protein_coding	Afmid	ENSMUST00000131268	retained_intron		11	1	117832273	419
ENSMUSG00000025911	protein_coding	Adhfe1	ENSMUST00000190654	nonsense_mediated_decay		1	1	9548119	2021
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225042	antisense		8	-1	57320757	490
ENSMUSG00000114852	protein_coding	Gm47189	ENSMUST00000226078	protein_coding	principal1	14	-1	41772441	884
ENSMUSG00000055254	protein_coding	Ntrk2	ENSMUST00000225950	protein_coding		13	1	58808691	2640
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000211191	retained_intron		8	-1	57318824	3654
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225514	retained_intron		8	-1	57320754	1767
ENSMUSG00000107352	lincRNA	Gm43660	ENSMUST00000200956	lincRNA		5	-1	31569072	6548
ENSMUSG00000037705	protein_coding	Tecta	ENSMUST00000159603	processed_transcript		9	-1	42343994	2165
ENSMUSG00000101774	lincRNA	Gm29616	ENSMUST00000190614	lincRNA		Y	1	74119006	621
ENSMUSG00000037904	protein_coding	Ankrd9	ENSMUST00000142012	protein_coding	alternative2	12	-1	110978943	1226
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000225933	retained_intron		8	-1	57320717	1689
ENSMUSG00000055254	protein_coding	Ntrk2	ENSMUST00000225583	protein_coding		13	1	58808691	2719
ENSMUSG00000092027	unprocessed_pseudogene	Gm17062	ENSMUST00000166987	unprocessed_pseudogene		14	-1	41892459	461
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000224335	retained_intron		8	-1	57320859	1365
ENSMUSG00000030519	protein_coding	Apba2	ENSMUST00000032732	protein_coding	principal2	7	1	64501706	3321
ENSMUSG00000055254	protein_coding	Ntrk2	ENSMUST00000226021	retained_intron		13	1	58835815	3350
ENSMUSG00000060038	protein_coding	Dhps	ENSMUST00000152871	nonsense_mediated_decay		8	1	85071796	1166
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000189098	antisense		8	-1	57324233	286
ENSMUSG00000030519	protein_coding	Apba2	ENSMUST00000205613	protein_coding		7	1	64501949	714
ENSMUSG00000095551	protein_coding	Gm7980	ENSMUST00000168107	protein_coding	principal1	14	-1	41907290	1403
ENSMUSG00000060038	protein_coding	Dhps	ENSMUST00000129826	retained_intron		8	1	85071806	659
ENSMUSG00000100510	processed_transcript	Hand2os1	ENSMUST00000187718	antisense		8	-1	57324233	400
ENSMUSG00000087612	antisense	A230005M16Rik	ENSMUST00000137661	antisense		2	-1	25709716	1605
ENSMUSG00000030519	protein_coding	Apba2	ENSMUST00000205604	protein_coding		7	1	64502138	643
ENSMUSG00000055254	protein_coding	Ntrk2	ENSMUST00000223636	nonsense_mediated_decay		13	1	58871735	583
ENSMUSG00000030519	protein_coding	Apba2	ENSMUST00000206246	protein_coding	alternative2	7	1	64635031	3027
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000224890	retained_intron		18	1	65023724	5814
ENSMUSG00000037904	protein_coding	Ankrd9	ENSMUST00000043459	protein_coding	principal2	12	-1	110979021	1706
ENSMUSG00000114437	antisense	4930415C11Rik	ENSMUST00000225244	antisense		13	-1	59084093	537
ENSMUSG00000060038	protein_coding	Dhps	ENSMUST00000142210	retained_intron		8	1	85072301	516
ENSMUSG00000087612	antisense	A230005M16Rik	ENSMUST00000151069	antisense		2	-1	25708265	1022
ENSMUSG00000030519	protein_coding	Apba2	ENSMUST00000205551	processed_transcript		7	1	64729402	772
ENSMUSG00000108575	lincRNA	Gm35665	ENSMUST00000206742	lincRNA		7	-1	35141449	1140
ENSMUSG00000069020	protein_coding	Urm1	ENSMUST00000149379	processed_transcript		2	1	29820075	377
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000226058	protein_coding		18	1	65025802	3393
ENSMUSG00000017300	protein_coding	Tnnc2	ENSMUST00000103095	protein_coding	principal1	2	-1	164779741	700
ENSMUSG00000017300	protein_coding	Tnnc2	ENSMUST00000155443	processed_transcript		2	-1	164779967	296
ENSMUSG00000069020	protein_coding	Urm1	ENSMUST00000156944	processed_transcript		2	1	29827342	497
ENSMUSG00000030519	protein_coding	Apba2	ENSMUST00000206061	processed_transcript		7	1	64743839	898
ENSMUSG00000037904	protein_coding	Ankrd9	ENSMUST00000135131	protein_coding	principal2	12	-1	110978995	1563
ENSMUSG00000036816	protein_coding	Atoh7	ENSMUST00000044059	protein_coding	principal1	10	1	63099651	1629
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000236103	protein_coding		18	1	65050919	3182
ENSMUSG00000030519	protein_coding	Apba2	ENSMUST00000206630	protein_coding		7	1	64744583	501
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000224347	protein_coding		18	1	65050990	3295
ENSMUSG00000049086	protein_coding	Bmyc	ENSMUST00000061483	protein_coding	principal1	2	1	25706739	983
ENSMUSG00000037904	protein_coding	Ankrd9	ENSMUST00000144882	processed_transcript		12	-1	110978579	350
ENSMUSG00000060038	protein_coding	Dhps	ENSMUST00000154575	retained_intron		8	1	85073058	784
ENSMUSG00000041598	protein_coding	Cdc42ep4	ENSMUST00000106616	protein_coding	principal1	11	-1	113751318	3405
ENSMUSG00000108721	TEC	Gm44721	ENSMUST00000206978	TEC		7	1	64529425	472
ENSMUSG00000036816	protein_coding	Atoh7	ENSMUST00000219964	processed_transcript		10	1	63100364	416
ENSMUSG00000108384	TEC	Gm45082	ENSMUST00000206082	TEC		7	1	64515311	601
ENSMUSG00000043154	protein_coding	Ppp2r3a	ENSMUST00000075941	protein_coding		9	-1	101251795	6786
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000236764	protein_coding		18	1	65076032	548
ENSMUSG00000060038	protein_coding	Dhps	ENSMUST00000142422	retained_intron		8	1	85073058	1097
ENSMUSG00000060038	protein_coding	Dhps	ENSMUST00000132766	retained_intron		8	1	85073580	349
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000166176	protein_coding	principal1	13	1	114818259	1855
ENSMUSG00000060038	protein_coding	Dhps	ENSMUST00000132356	retained_intron		8	1	85074699	379
ENSMUSG00000070990	protein_coding	Foxe1	ENSMUST00000095097	protein_coding	principal1	4	1	46343609	2804
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000184335	protein_coding		13	1	114818263	646
ENSMUSG00000075571	protein_coding	Defb30	ENSMUST00000111207	protein_coding	principal2	14	-1	63037833	989
ENSMUSG00000043154	protein_coding	Ppp2r3a	ENSMUST00000066773	protein_coding	principal1	9	-1	101199073	4461
ENSMUSG00000015542	protein_coding	Nat9	ENSMUST00000103040	protein_coding	principal1	11	-1	115187390	1204
ENSMUSG00000041598	protein_coding	Cdc42ep4	ENSMUST00000053536	protein_coding	principal1	11	-1	113751881	3008
ENSMUSG00000020439	protein_coding	Smtn	ENSMUST00000075118	protein_coding		11	-1	3539239	3117
ENSMUSG00000031099	protein_coding	Smarca1	ENSMUST00000077569	protein_coding	principal3	X	-1	47892519	4024
ENSMUSG00000075571	protein_coding	Defb30	ENSMUST00000111209	protein_coding	alternative2	14	-1	63049955	721
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000184046	nonsense_mediated_decay		13	1	114818270	733
ENSMUSG00000043154	protein_coding	Ppp2r3a	ENSMUST00000185719	processed_transcript		9	-1	101125125	317
ENSMUSG00000041598	protein_coding	Cdc42ep4	ENSMUST00000131488	protein_coding		11	-1	113739322	727
ENSMUSG00000075571	protein_coding	Defb30	ENSMUST00000111208	protein_coding	alternative2	14	-1	63049960	503
ENSMUSG00000015542	protein_coding	Nat9	ENSMUST00000103038	protein_coding	principal1	11	-1	115187332	1143
ENSMUSG00000087383	antisense	Gm12446	ENSMUST00000123933	antisense		4	-1	46343431	798
ENSMUSG00000110499	TEC	Gm45873	ENSMUST00000211865	TEC		8	1	94048781	1915
ENSMUSG00000015542	protein_coding	Nat9	ENSMUST00000103041	protein_coding	principal1	11	-1	115187844	953
ENSMUSG00000075571	protein_coding	Defb30	ENSMUST00000100490	protein_coding	principal2	14	-1	63037846	307
ENSMUSG00000027411	protein_coding	Vps16	ENSMUST00000028900	protein_coding	principal1	2	1	130424365	3161
ENSMUSG00000041598	protein_coding	Cdc42ep4	ENSMUST00000153453	protein_coding		11	-1	113751154	562
ENSMUSG00000087383	antisense	Gm12446	ENSMUST00000152069	antisense		4	-1	46345515	713
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000170985	retained_intron		13	1	114818270	2116
ENSMUSG00000031099	protein_coding	Smarca1	ENSMUST00000101616	protein_coding	alternative2	X	-1	47892519	3991
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000184245	protein_coding		13	1	114818271	4559
ENSMUSG00000015542	protein_coding	Nat9	ENSMUST00000134399	processed_transcript		11	-1	115187842	593
ENSMUSG00000069020	protein_coding	Urm1	ENSMUST00000091142	protein_coding	principal1	2	1	29827342	2196
ENSMUSG00000025066	protein_coding	Sfr1	ENSMUST00000099353	protein_coding	principal1	19	1	47731682	1657
ENSMUSG00000043154	protein_coding	Ppp2r3a	ENSMUST00000188612	retained_intron		9	-1	101198851	2333
ENSMUSG00000015542	protein_coding	Nat9	ENSMUST00000103039	protein_coding	principal1	11	-1	115187355	1158
ENSMUSG00000043154	protein_coding	Ppp2r3a	ENSMUST00000185887	retained_intron		9	-1	101199005	2227
ENSMUSG00000031099	protein_coding	Smarca1	ENSMUST00000088973	protein_coding	principal3	X	-1	47892552	4798
ENSMUSG00000043154	protein_coding	Ppp2r3a	ENSMUST00000185735	retained_intron		9	-1	101200544	3079
ENSMUSG00000080816	processed_pseudogene	Gm12447	ENSMUST00000119110	processed_pseudogene		4	1	46327296	470
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000050131	retained_intron		13	1	114818277	754
ENSMUSG00000027603	protein_coding	Ggt7	ENSMUST00000029131	protein_coding	principal1	2	-1	155514848	2614
ENSMUSG00000025066	protein_coding	Sfr1	ENSMUST00000237695	processed_transcript		19	1	47732204	665
ENSMUSG00000030929	protein_coding	Eri2	ENSMUST00000106523	protein_coding		7	-1	119793967	973
ENSMUSG00000043154	protein_coding	Ppp2r3a	ENSMUST00000191226	processed_transcript		9	-1	101211837	807
ENSMUSG00000020439	protein_coding	Smtn	ENSMUST00000154861	processed_transcript		11	-1	3539252	3348
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000184214	protein_coding		13	1	114818283	551
ENSMUSG00000015542	protein_coding	Nat9	ENSMUST00000134769	processed_transcript		11	-1	115187276	386
ENSMUSG00000103672	TEC	Gm37621	ENSMUST00000194716	TEC		9	1	101116701	5531
ENSMUSG00000030929	protein_coding	Eri2	ENSMUST00000063902	protein_coding		7	-1	119793967	1241
ENSMUSG00000031099	protein_coding	Smarca1	ENSMUST00000153548	protein_coding		X	-1	47892396	2304
ENSMUSG00000079671	processed_transcript	2610203C22Rik	ENSMUST00000115480	antisense		1	-1	9631092	1246
ENSMUSG00000015542	protein_coding	Nat9	ENSMUST00000153796	processed_transcript		11	-1	115187262	751
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000165022	protein_coding		13	1	114818286	962
ENSMUSG00000101001	processed_pseudogene	Gm3121	ENSMUST00000187086	processed_pseudogene		9	-1	101281773	406
ENSMUSG00000020439	protein_coding	Smtn	ENSMUST00000020721	protein_coding	principal2	11	-1	3539292	3335
ENSMUSG00000099947	processed_pseudogene	Gm28660	ENSMUST00000186496	processed_pseudogene		9	-1	101337972	253
ENSMUSG00000069020	protein_coding	Urm1	ENSMUST00000147325	processed_transcript		2	1	29827361	681
ENSMUSG00000031099	protein_coding	Smarca1	ENSMUST00000141084	protein_coding		X	-1	47892432	1965
ENSMUSG00000079671	processed_transcript	2610203C22Rik	ENSMUST00000145176	retained_intron		1	-1	9631137	662
ENSMUSG00000054763	protein_coding	Defb42	ENSMUST00000067990	protein_coding	principal1	14	1	63046991	618
ENSMUSG00000027603	protein_coding	Ggt7	ENSMUST00000138033	retained_intron		2	-1	155499159	603
ENSMUSG00000015542	protein_coding	Nat9	ENSMUST00000137843	processed_transcript		11	-1	115187081	846
ENSMUSG00000029423	protein_coding	Piwil1	ENSMUST00000200192	protein_coding		5	1	128702524	1691
ENSMUSG00000101941	lincRNA	Gm28979	ENSMUST00000190949	lincRNA		9	1	101342194	1540
ENSMUSG00000027411	protein_coding	Vps16	ENSMUST00000130258	processed_transcript		2	1	130424404	907
ENSMUSG00000069020	protein_coding	Urm1	ENSMUST00000130542	retained_intron		2	1	29827395	986
ENSMUSG00000031099	protein_coding	Smarca1	ENSMUST00000153587	protein_coding		X	-1	47892941	360
ENSMUSG00000020439	protein_coding	Smtn	ENSMUST00000144635	processed_transcript		11	-1	3522554	625
ENSMUSG00000015542	protein_coding	Nat9	ENSMUST00000127419	processed_transcript		11	-1	115187859	450
ENSMUSG00000079671	processed_transcript	2610203C22Rik	ENSMUST00000148585	antisense		1	-1	9631144	3475
ENSMUSG00000090952	bidirectional_promoter_lncRNA	Gm17251	ENSMUST00000170103	bidirectional_promoter_lncRNA		17	1	33759992	925
ENSMUSG00000101550	processed_pseudogene	Gm29385	ENSMUST00000186831	processed_pseudogene		9	-1	101436045	363
ENSMUSG00000069020	protein_coding	Urm1	ENSMUST00000123021	retained_intron		2	1	29841648	2084
ENSMUSG00000117167	processed_pseudogene	Gm6599	ENSMUST00000233819	processed_pseudogene		16	1	95754300	408
ENSMUSG00000077450	protein_coding	Rab11b	ENSMUST00000235046	processed_transcript		17	-1	33760063	5822
ENSMUSG00000031099	protein_coding	Smarca1	ENSMUST00000140756	processed_transcript		X	-1	47892974	409
ENSMUSG00000027603	protein_coding	Ggt7	ENSMUST00000148296	retained_intron		2	-1	155503133	874
ENSMUSG00000027411	protein_coding	Vps16	ENSMUST00000132388	retained_intron		2	1	130437636	792
ENSMUSG00000030929	protein_coding	Eri2	ENSMUST00000125595	retained_intron		7	-1	119793975	6025
ENSMUSG00000061486	processed_pseudogene	Gm5161	ENSMUST00000075243	processed_pseudogene		9	-1	101449353	853
ENSMUSG00000020439	protein_coding	Smtn	ENSMUST00000156201	protein_coding		11	-1	3540612	787
ENSMUSG00000027603	protein_coding	Ggt7	ENSMUST00000176117	protein_coding		2	-1	155506954	887
ENSMUSG00000079671	processed_transcript	2610203C22Rik	ENSMUST00000153239	antisense		1	-1	9631175	597
ENSMUSG00000111696	processed_pseudogene	Gm47932	ENSMUST00000215480	processed_pseudogene		9	-1	101757705	2791
ENSMUSG00000054763	protein_coding	Defb42	ENSMUST00000142140	processed_transcript		14	1	63047029	1909
ENSMUSG00000079671	processed_transcript	2610203C22Rik	ENSMUST00000148310	antisense		1	-1	9631164	563
ENSMUSG00000111269	processed_pseudogene	Gm47933	ENSMUST00000215973	processed_pseudogene		9	-1	101758863	1111
ENSMUSG00000085329	lincRNA	2810404F17Rik	ENSMUST00000156615	lincRNA		16	-1	95808317	1704
ENSMUSG00000027603	protein_coding	Ggt7	ENSMUST00000147601	protein_coding		2	-1	155518237	956
ENSMUSG00000054763	protein_coding	Defb42	ENSMUST00000111203	protein_coding	principal1	14	1	63047094	567
ENSMUSG00000111672	processed_pseudogene	Gm47934	ENSMUST00000215212	processed_pseudogene		9	1	101758542	268
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000164737	protein_coding		13	1	114818287	745
ENSMUSG00000005150	protein_coding	Wdr83	ENSMUST00000131909	retained_intron		8	-1	85080632	1406
ENSMUSG00000027411	protein_coding	Vps16	ENSMUST00000131220	retained_intron		2	1	130439630	1136
ENSMUSG00000031917	protein_coding	Nip7	ENSMUST00000034392	protein_coding	principal1	8	1	107056877	3036
ENSMUSG00000074224	transcribed_unitary_pseudogene	4932431P20Rik	ENSMUST00000141713	transcribed_unitary_pseudogene		7	1	29524543	9288
ENSMUSG00000020439	protein_coding	Smtn	ENSMUST00000136243	protein_coding		11	-1	3539251	679
ENSMUSG00000054763	protein_coding	Defb42	ENSMUST00000186438	protein_coding		14	1	63048229	257
ENSMUSG00000027411	protein_coding	Vps16	ENSMUST00000137084	retained_intron		2	1	130440322	546
ENSMUSG00000030929	protein_coding	Eri2	ENSMUST00000033224	nonsense_mediated_decay		7	-1	119793982	3487
ENSMUSG00000074224	transcribed_unitary_pseudogene	4932431P20Rik	ENSMUST00000098602	processed_transcript		7	1	29536716	1340
ENSMUSG00000085010	antisense	Gssos1	ENSMUST00000142509	antisense		2	1	155592319	716
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000184781	protein_coding		13	1	114818294	1250
ENSMUSG00000005150	protein_coding	Wdr83	ENSMUST00000136696	retained_intron		8	-1	85080703	1561
ENSMUSG00000048277	protein_coding	Syngr2	ENSMUST00000026649	protein_coding	principal1	11	1	117809668	1520
ENSMUSG00000117232	lincRNA	1600002D24Rik	ENSMUST00000233116	lincRNA		16	-1	95916757	629
ENSMUSG00000020439	protein_coding	Smtn	ENSMUST00000151804	processed_transcript		11	-1	3539249	364
ENSMUSG00000020439	protein_coding	Smtn	ENSMUST00000170588	protein_coding	principal2	11	-1	3539292	3386
ENSMUSG00000054763	protein_coding	Defb42	ENSMUST00000138708	processed_transcript		14	1	63055073	537
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000183407	protein_coding		13	1	114818300	1074
ENSMUSG00000027411	protein_coding	Vps16	ENSMUST00000125098	retained_intron		2	1	130441608	655
ENSMUSG00000048277	protein_coding	Syngr2	ENSMUST00000177131	protein_coding		11	1	117809683	935
ENSMUSG00000031917	protein_coding	Nip7	ENSMUST00000170962	protein_coding		8	1	107056901	606
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000184672	protein_coding	principal1	13	1	114818306	1447
ENSMUSG00000040325	protein_coding	Dcaf1	ENSMUST00000159645	protein_coding		9	1	106821874	4945
ENSMUSG00000103871	lincRNA	Gm38361	ENSMUST00000193419	lincRNA		Y	-1	18558876	458
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000164871	protein_coding		13	1	114818905	519
ENSMUSG00000048277	protein_coding	Syngr2	ENSMUST00000177241	nonsense_mediated_decay		11	1	117809693	449
ENSMUSG00000117232	lincRNA	1600002D24Rik	ENSMUST00000233770	lincRNA		16	-1	95845770	763
ENSMUSG00000104356	unprocessed_pseudogene	Gm31260	ENSMUST00000193478	unprocessed_pseudogene		Y	-1	18586790	696
ENSMUSG00000027411	protein_coding	Vps16	ENSMUST00000134677	retained_intron		2	1	130443167	454
ENSMUSG00000117232	lincRNA	1600002D24Rik	ENSMUST00000232930	lincRNA		16	-1	95898713	1855
ENSMUSG00000103802	unprocessed_pseudogene	Gm21660	ENSMUST00000195789	unprocessed_pseudogene		Y	-1	18623762	696
ENSMUSG00000015536	protein_coding	Mocs2	ENSMUST00000015680	protein_coding	principal1	13	1	114818277	1152
ENSMUSG00000086632	lincRNA	1700112J05Rik	ENSMUST00000129353	lincRNA		5	-1	77018863	793
ENSMUSG00000030929	protein_coding	Eri2	ENSMUST00000150844	protein_coding	principal1	7	-1	119794058	3564
ENSMUSG00000048277	protein_coding	Syngr2	ENSMUST00000120928	protein_coding		11	1	117809696	1402
ENSMUSG00000031917	protein_coding	Nip7	ENSMUST00000212281	retained_intron		8	1	107056906	546
ENSMUSG00000117232	lincRNA	1600002D24Rik	ENSMUST00000233375	lincRNA		16	-1	95929077	416
ENSMUSG00000104472	lincRNA	Gm38209	ENSMUST00000192711	lincRNA		Y	-1	18633125	2169
ENSMUSG00000097925	antisense	Gm26574	ENSMUST00000181876	antisense		1	-1	189836620	2141
ENSMUSG00000039798	antisense	2600006K01Rik	ENSMUST00000047607	antisense		2	-1	29870317	1406
ENSMUSG00000048277	protein_coding	Syngr2	ENSMUST00000175737	protein_coding		11	1	117809712	785
ENSMUSG00000104172	TEC	Gm37259	ENSMUST00000193903	TEC		16	1	95759836	849
ENSMUSG00000030929	protein_coding	Eri2	ENSMUST00000139192	nonsense_mediated_decay		7	-1	119793959	3286
ENSMUSG00000048277	protein_coding	Syngr2	ENSMUST00000143852	protein_coding		11	1	117812258	512
ENSMUSG00000063820	protein_coding	Arl9	ENSMUST00000071199	protein_coding	principal1	5	1	77004055	402
ENSMUSG00000048277	protein_coding	Syngr2	ENSMUST00000176936	retained_intron		11	1	117812991	330
ENSMUSG00000030929	protein_coding	Eri2	ENSMUST00000133926	retained_intron		7	-1	119787952	689
ENSMUSG00000085903	lincRNA	Gm15340	ENSMUST00000144984	lincRNA		16	1	95900398	704
ENSMUSG00000103347	lincRNA	Gm37734	ENSMUST00000194294	lincRNA		Y	1	18665417	621
ENSMUSG00000029767	protein_coding	Calu	ENSMUST00000173216	protein_coding		6	1	29348069	673
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000224663	processed_transcript		18	1	65077431	4875
ENSMUSG00000093485	protein_coding	Gm20708	ENSMUST00000132298	protein_coding	principal1	11	1	117809668	1780
ENSMUSG00000063820	protein_coding	Arl9	ENSMUST00000134197	protein_coding		5	1	77006472	534
ENSMUSG00000031919	protein_coding	Tmed6	ENSMUST00000034393	protein_coding	principal1	8	-1	107065644	871
ENSMUSG00000025871	protein_coding	4833439L19Rik	ENSMUST00000026989	protein_coding	principal3	13	-1	54565435	2727
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000236595	processed_transcript		18	1	65077634	717
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000238376	protein_coding		18	1	65083054	1792
ENSMUSG00000104407	lincRNA	Gm38013	ENSMUST00000195453	lincRNA		Y	1	18693357	1499
ENSMUSG00000083876	processed_pseudogene	Gm11439	ENSMUST00000118598	processed_pseudogene		11	-1	85095549	409
ENSMUSG00000036398	protein_coding	Ppp1r11	ENSMUST00000040402	protein_coding	principal1	17	-1	36951713	1599
ENSMUSG00000107868	TEC	Gm5112	ENSMUST00000204407	TEC		6	1	122811170	2368
ENSMUSG00000082806	processed_pseudogene	Rpl13-ps1	ENSMUST00000121801	processed_pseudogene		11	-1	85111793	668
ENSMUSG00000068323	protein_coding	Slc4a5	ENSMUST00000113900	protein_coding	alternative2	6	1	83219828	3630
ENSMUSG00000104407	lincRNA	Gm38013	ENSMUST00000195214	lincRNA		Y	1	18693810	621
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000235310	protein_coding		18	1	65143558	586
ENSMUSG00000082917	processed_pseudogene	Gm11440	ENSMUST00000121509	processed_pseudogene		11	-1	85072995	527
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000235577	protein_coding		18	1	65155734	770
ENSMUSG00000025871	protein_coding	4833439L19Rik	ENSMUST00000153065	protein_coding	alternative1	13	-1	54565303	2502
ENSMUSG00000039787	protein_coding	Cercam	ENSMUST00000154464	protein_coding		2	1	29869164	374
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000235571	retained_intron		18	1	65160753	1116
ENSMUSG00000068323	protein_coding	Slc4a5	ENSMUST00000122897	processed_transcript		6	1	83237190	437
ENSMUSG00000036398	protein_coding	Ppp1r11	ENSMUST00000174711	protein_coding	principal1	17	-1	36951741	520
ENSMUSG00000117025	processed_pseudogene	Gm49950	ENSMUST00000232730	processed_pseudogene		17	-1	21968794	308
ENSMUSG00000086004	processed_pseudogene	Gm7805	ENSMUST00000154348	processed_pseudogene		17	-1	21964583	448
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000237644	protein_coding		18	1	65174067	2018
ENSMUSG00000092147	unprocessed_pseudogene	Gm7052	ENSMUST00000167568	unprocessed_pseudogene		17	-1	22040539	1512
ENSMUSG00000037773	protein_coding	Pced1a	ENSMUST00000131561	processed_transcript		2	-1	130424248	3402
ENSMUSG00000099397	processed_pseudogene	Gm7809	ENSMUST00000153199	processed_pseudogene		17	-1	21968242	742
ENSMUSG00000036398	protein_coding	Ppp1r11	ENSMUST00000173540	protein_coding		17	-1	36951338	657
ENSMUSG00000085489	lincRNA	Gm3669	ENSMUST00000133259	lincRNA		X	-1	29915969	677
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000236916	processed_transcript		18	1	65181069	792
ENSMUSG00000097635	antisense	Gm26826	ENSMUST00000181317	antisense		6	-1	122820614	1395
ENSMUSG00000085489	lincRNA	Gm3669	ENSMUST00000140946	lincRNA		X	-1	29915946	764
ENSMUSG00000085489	lincRNA	Gm3669	ENSMUST00000127852	lincRNA		X	-1	29916031	397
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000235339	retained_intron		18	1	65181145	772
ENSMUSG00000085489	lincRNA	Gm3669	ENSMUST00000126712	lincRNA		X	-1	29916002	1846
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000237818	retained_intron		18	1	65203865	550
ENSMUSG00000085489	lincRNA	Gm3669	ENSMUST00000144018	lincRNA		X	-1	29916002	1118
ENSMUSG00000068323	protein_coding	Slc4a5	ENSMUST00000113899	protein_coding	alternative2	6	1	83237375	5039
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000237492	retained_intron		18	1	65205529	437
ENSMUSG00000024589	protein_coding	Nedd4l	ENSMUST00000236100	processed_transcript		18	1	65207884	348
ENSMUSG00000068323	protein_coding	Slc4a5	ENSMUST00000141863	processed_transcript		6	1	83277393	542
ENSMUSG00000068323	protein_coding	Slc4a5	ENSMUST00000131432	processed_transcript		6	1	83287635	751
ENSMUSG00000040325	protein_coding	Dcaf1	ENSMUST00000055009	protein_coding	principal1	9	1	106829069	4967
ENSMUSG00000068323	protein_coding	Slc4a5	ENSMUST00000039212	protein_coding	principal2	6	1	83237375	5123
ENSMUSG00000040325	protein_coding	Dcaf1	ENSMUST00000161758	protein_coding		9	1	106829069	5539
ENSMUSG00000114210	antisense	A330084C13Rik	ENSMUST00000224731	antisense		18	-1	64888491	3431
ENSMUSG00000025871	protein_coding	4833439L19Rik	ENSMUST00000153708	processed_transcript		13	-1	54565333	946
ENSMUSG00000047502	protein_coding	Mroh7	ENSMUST00000106770	protein_coding	principal1	4	-1	106727930	4346
ENSMUSG00000040325	protein_coding	Dcaf1	ENSMUST00000188343	retained_intron		9	1	106850886	2191
ENSMUSG00000031479	protein_coding	Vps36	ENSMUST00000033866	protein_coding	principal1	8	1	22192809	3574
ENSMUSG00000045102	protein_coding	Poln	ENSMUST00000202638	protein_coding		5	-1	34169448	2814
ENSMUSG00000022913	protein_coding	Psmg1	ENSMUST00000023630	protein_coding	principal1	16	-1	95990960	1044
ENSMUSG00000094685	processed_pseudogene	Gm5900	ENSMUST00000179862	processed_pseudogene		7	-1	104950289	375
ENSMUSG00000053347	protein_coding	Zfp943	ENSMUST00000055349	protein_coding	principal1	17	1	21962552	2741
ENSMUSG00000040325	protein_coding	Dcaf1	ENSMUST00000163657	protein_coding		9	1	106874256	275
ENSMUSG00000031479	protein_coding	Vps36	ENSMUST00000153949	retained_intron		8	1	22216993	528
ENSMUSG00000025871	protein_coding	4833439L19Rik	ENSMUST00000143173	retained_intron		13	-1	54565291	874
ENSMUSG00000092125	processed_pseudogene	AA543401	ENSMUST00000164248	processed_pseudogene		9	1	107192793	1269
ENSMUSG00000022913	protein_coding	Psmg1	ENSMUST00000233128	protein_coding		16	-1	95990890	807
ENSMUSG00000025871	protein_coding	4833439L19Rik	ENSMUST00000150938	retained_intron		13	-1	54565338	854
ENSMUSG00000107015	TEC	2900076G11Rik	ENSMUST00000202297	TEC		5	1	31581079	631
ENSMUSG00000022913	protein_coding	Psmg1	ENSMUST00000233590	nonsense_mediated_decay		16	-1	95990890	763
ENSMUSG00000044705	protein_coding	Olfr670	ENSMUST00000214216	protein_coding	principal1	7	-1	104962620	3729
ENSMUSG00000103835	sense_intronic	Gm37612	ENSMUST00000193626	sense_intronic		9	1	106870674	582
ENSMUSG00000022913	protein_coding	Psmg1	ENSMUST00000233134	retained_intron		16	-1	95989898	533
ENSMUSG00000044705	protein_coding	Olfr670	ENSMUST00000050482	protein_coding	principal1	7	-1	104960730	939
ENSMUSG00000037376	protein_coding	Trmt6	ENSMUST00000152836	retained_intron		2	-1	132810635	4153
ENSMUSG00000053347	protein_coding	Zfp943	ENSMUST00000153985	protein_coding		17	1	21962559	1598
ENSMUSG00000045102	protein_coding	Poln	ENSMUST00000042954	protein_coding	principal3	5	-1	34169448	2897
ENSMUSG00000083435	processed_pseudogene	Gm15824	ENSMUST00000119516	processed_pseudogene		5	-1	64190987	955
ENSMUSG00000104947	TEC	Gm43721	ENSMUST00000199677	TEC		5	1	64233930	2313
ENSMUSG00000025871	protein_coding	4833439L19Rik	ENSMUST00000143144	protein_coding		13	-1	54565330	720
ENSMUSG00000005150	protein_coding	Wdr83	ENSMUST00000093357	protein_coding	principal1	8	-1	85080746	1238
ENSMUSG00000053347	protein_coding	Zfp943	ENSMUST00000174015	nonsense_mediated_decay		17	1	21962586	1338
ENSMUSG00000081143	processed_pseudogene	Gm15823	ENSMUST00000064305	processed_pseudogene		5	-1	64253225	670
ENSMUSG00000025871	protein_coding	4833439L19Rik	ENSMUST00000147318	retained_intron		13	-1	54565344	659
ENSMUSG00000117234	processed_pseudogene	Gm7818	ENSMUST00000232840	processed_pseudogene		17	-1	22069888	1756
ENSMUSG00000083100	processed_pseudogene	Gm6044	ENSMUST00000121819	processed_pseudogene		5	1	64320256	499
ENSMUSG00000025871	protein_coding	4833439L19Rik	ENSMUST00000132136	protein_coding		13	-1	54565356	442
ENSMUSG00000045102	protein_coding	Poln	ENSMUST00000202409	protein_coding	alternative2	5	-1	34169426	2736
ENSMUSG00000040775	processed_pseudogene	Gm9772	ENSMUST00000075018	processed_pseudogene		17	-1	22007599	1606
ENSMUSG00000110291	protein_coding	Gm37419	ENSMUST00000210705	protein_coding	principal1	16	1	23988482	114
ENSMUSG00000029767	protein_coding	Calu	ENSMUST00000173694	protein_coding		6	1	29348069	611
ENSMUSG00000074102	protein_coding	Rbm15b	ENSMUST00000055843	protein_coding	principal1	9	-1	106887428	6511
ENSMUSG00000025871	protein_coding	4833439L19Rik	ENSMUST00000126295	protein_coding		13	-1	54565325	420
ENSMUSG00000005150	protein_coding	Wdr83	ENSMUST00000145880	retained_intron		8	-1	85079915	677
ENSMUSG00000045102	protein_coding	Poln	ENSMUST00000202741	processed_transcript		5	-1	34105803	407
ENSMUSG00000005150	protein_coding	Wdr83	ENSMUST00000142201	protein_coding		8	-1	85076107	391
ENSMUSG00000045102	protein_coding	Poln	ENSMUST00000202027	processed_transcript		5	-1	34105743	458
ENSMUSG00000005150	protein_coding	Wdr83	ENSMUST00000146900	retained_intron		8	-1	85076291	689
ENSMUSG00000045102	protein_coding	Poln	ENSMUST00000202076	retained_intron		5	-1	34105819	2399
ENSMUSG00000074102	protein_coding	Rbm15b	ENSMUST00000185707	protein_coding		9	-1	106885619	682
ENSMUSG00000029248	protein_coding	Thegl	ENSMUST00000031161	protein_coding	principal1	5	1	77016023	1719
ENSMUSG00000029174	protein_coding	Tbc1d1	ENSMUST00000199270	protein_coding		5	1	64156305	741
ENSMUSG00000024806	protein_coding	Mlana	ENSMUST00000025719	protein_coding	principal1	19	1	29697824	906
ENSMUSG00000005150	protein_coding	Wdr83	ENSMUST00000152186	retained_intron		8	-1	85081306	2707
ENSMUSG00000029248	protein_coding	Thegl	ENSMUST00000117880	protein_coding	principal1	5	1	77016023	1641
ENSMUSG00000021180	protein_coding	Rps6ka5	ENSMUST00000222731	protein_coding	alternative2	12	-1	100725120	5642
ENSMUSG00000029811	protein_coding	Aoc1	ENSMUST00000204856	protein_coding		6	1	48872896	813
ENSMUSG00000005150	protein_coding	Wdr83	ENSMUST00000152785	protein_coding		8	-1	85080673	845
ENSMUSG00000024806	protein_coding	Mlana	ENSMUST00000235954	nonsense_mediated_decay		19	1	29697934	739
ENSMUSG00000003154	protein_coding	Foxj2	ENSMUST00000003238	protein_coding	principal1	6	1	122819914	5283
ENSMUSG00000029248	protein_coding	Thegl	ENSMUST00000118941	protein_coding		5	1	77037054	746
ENSMUSG00000005150	protein_coding	Wdr83	ENSMUST00000149050	nonsense_mediated_decay		8	-1	85080674	708
ENSMUSG00000003154	protein_coding	Foxj2	ENSMUST00000203075	protein_coding		6	1	122826675	693
ENSMUSG00000005150	protein_coding	Wdr83	ENSMUST00000135463	retained_intron		8	-1	85080669	896
ENSMUSG00000099889	unprocessed_pseudogene	Mrgprb11-ps	ENSMUST00000187816	unprocessed_pseudogene		7	-1	48685614	994
ENSMUSG00000003154	protein_coding	Foxj2	ENSMUST00000177927	protein_coding	principal1	6	1	122820511	4620
ENSMUSG00000101093	processed_pseudogene	Eef1a1-ps2	ENSMUST00000189839	processed_pseudogene		1	1	31559540	1337
ENSMUSG00000021180	protein_coding	Rps6ka5	ENSMUST00000043599	protein_coding	principal2	12	-1	100725028	4406
ENSMUSG00000109170	lincRNA	Gm45086	ENSMUST00000209052	lincRNA		7	-1	48726822	462
ENSMUSG00000037773	protein_coding	Pced1a	ENSMUST00000089581	protein_coding	principal1	2	-1	130424278	3496
ENSMUSG00000021180	protein_coding	Rps6ka5	ENSMUST00000221323	retained_intron		12	-1	100560529	4197
ENSMUSG00000020319	protein_coding	Wdpcp	ENSMUST00000020568	protein_coding	principal1	11	1	21572235	2792
ENSMUSG00000047502	protein_coding	Mroh7	ENSMUST00000135000	retained_intron		4	-1	106708548	2747
ENSMUSG00000039787	protein_coding	Cercam	ENSMUST00000047521	protein_coding	principal1	2	1	29869494	2715
ENSMUSG00000020319	protein_coding	Wdpcp	ENSMUST00000128794	processed_transcript		11	1	21813399	480
ENSMUSG00000047502	protein_coding	Mroh7	ENSMUST00000134160	processed_transcript		4	-1	106710031	2437
ENSMUSG00000045319	protein_coding	Proser2	ENSMUST00000114942	protein_coding	principal1	2	-1	6130211	4398
ENSMUSG00000037773	protein_coding	Pced1a	ENSMUST00000123977	processed_transcript		2	-1	130424281	3045
ENSMUSG00000025969	protein_coding	Nrp2	ENSMUST00000102822	protein_coding		1	1	62703285	6708
ENSMUSG00000039787	protein_coding	Cercam	ENSMUST00000134152	protein_coding		2	1	29869544	478
ENSMUSG00000029423	protein_coding	Piwil1	ENSMUST00000086056	protein_coding	principal2	5	1	128736174	4016
ENSMUSG00000022508	protein_coding	Bcl6	ENSMUST00000023151	protein_coding	principal1	16	-1	23988852	3525
ENSMUSG00000037773	protein_coding	Pced1a	ENSMUST00000153663	retained_intron		2	-1	130424266	3032
ENSMUSG00000047502	protein_coding	Mroh7	ENSMUST00000145374	processed_transcript		4	-1	106709715	2367
ENSMUSG00000020319	protein_coding	Wdpcp	ENSMUST00000149757	processed_transcript		11	1	21572305	3020
ENSMUSG00000047502	protein_coding	Mroh7	ENSMUST00000142954	processed_transcript		4	-1	106699886	361
ENSMUSG00000031791	protein_coding	Tmem38a	ENSMUST00000212763	protein_coding		8	1	72572055	882
ENSMUSG00000047502	protein_coding	Mroh7	ENSMUST00000145044	protein_coding		4	-1	106727976	496
ENSMUSG00000039787	protein_coding	Cercam	ENSMUST00000153863	retained_intron		2	1	29875645	599
ENSMUSG00000020319	protein_coding	Wdpcp	ENSMUST00000131135	protein_coding		11	1	21572235	505
ENSMUSG00000029423	protein_coding	Piwil1	ENSMUST00000195959	protein_coding	alternative2	5	1	128737490	3013
ENSMUSG00000047502	protein_coding	Mroh7	ENSMUST00000148281	protein_coding		4	-1	106730925	288
ENSMUSG00000045319	protein_coding	Proser2	ENSMUST00000054254	protein_coding	principal1	2	-1	6130146	2061
ENSMUSG00000039787	protein_coding	Cercam	ENSMUST00000155355	retained_intron		2	1	29876192	471
ENSMUSG00000022508	protein_coding	Bcl6	ENSMUST00000135352	retained_intron		16	-1	23972380	3933
ENSMUSG00000020319	protein_coding	Wdpcp	ENSMUST00000143608	processed_transcript		11	1	21689583	741
ENSMUSG00000105483	TEC	4930553I04Rik	ENSMUST00000196722	TEC		5	-1	128736029	670
ENSMUSG00000032575	protein_coding	Manf	ENSMUST00000159620	protein_coding		9	-1	106891872	545
ENSMUSG00000083761	processed_pseudogene	Pgam1-ps1	ENSMUST00000119107	processed_pseudogene		11	-1	21684056	749
ENSMUSG00000032575	protein_coding	Manf	ENSMUST00000161272	protein_coding		9	-1	106890283	357
ENSMUSG00000094531	protein_coding	Olfr671	ENSMUST00000210963	protein_coding		7	-1	104979126	3157
ENSMUSG00000037773	protein_coding	Pced1a	ENSMUST00000110277	protein_coding	principal1	2	-1	130424687	1689
ENSMUSG00000094531	protein_coding	Olfr671	ENSMUST00000217091	protein_coding		7	-1	104979117	3225
ENSMUSG00000045319	protein_coding	Proser2	ENSMUST00000126551	protein_coding		2	-1	6130139	945
ENSMUSG00000100400	lincRNA	Gm29326	ENSMUST00000185541	lincRNA		7	-1	29562815	2451
ENSMUSG00000094531	protein_coding	Olfr671	ENSMUST00000078710	protein_coding	principal1	7	-1	104975983	942
ENSMUSG00000045319	protein_coding	Proser2	ENSMUST00000194054	processed_transcript		2	-1	6130181	5159
ENSMUSG00000037705	protein_coding	Tecta	ENSMUST00000042190	protein_coding	principal3	9	-1	42399929	7338
ENSMUSG00000037773	protein_coding	Pced1a	ENSMUST00000141749	retained_intron		2	-1	130424701	3349
ENSMUSG00000102290	unprocessed_pseudogene	Gm21678	ENSMUST00000193567	unprocessed_pseudogene		Y	-1	18743166	696
ENSMUSG00000046958	transcribed_unitary_pseudogene	4930432E11Rik	ENSMUST00000063585	transcribed_unitary_pseudogene		7	1	29558579	11030
ENSMUSG00000037773	protein_coding	Pced1a	ENSMUST00000142536	retained_intron		2	-1	130424310	2243
ENSMUSG00000069125	processed_pseudogene	Rps24-ps2	ENSMUST00000091375	processed_pseudogene		3	1	3791898	395
ENSMUSG00000103612	lincRNA	Gm37948	ENSMUST00000192846	lincRNA		Y	-1	18752497	2169
ENSMUSG00000046958	transcribed_unitary_pseudogene	4930432E11Rik	ENSMUST00000053635	processed_transcript		7	1	29560515	4111
ENSMUSG00000031791	protein_coding	Tmem38a	ENSMUST00000034244	protein_coding	principal1	8	1	72572073	2124
ENSMUSG00000037705	protein_coding	Tecta	ENSMUST00000160940	protein_coding	alternative2	9	-1	42399727	7048
ENSMUSG00000110937	antisense	Gm47629	ENSMUST00000215213	antisense		9	1	42385862	1358
ENSMUSG00000100111	lincRNA	A330087D11Rik	ENSMUST00000187265	lincRNA		7	-1	29573928	1334
ENSMUSG00000051172	protein_coding	Olfr672	ENSMUST00000213942	protein_coding	principal1	7	-1	105002029	1490
ENSMUSG00000097547	processed_transcript	B230110C06Rik	ENSMUST00000181388	antisense		14	1	15437623	1274
ENSMUSG00000077450	protein_coding	Rab11b	ENSMUST00000057373	protein_coding	principal1	17	-1	33760530	6109
ENSMUSG00000032575	protein_coding	Manf	ENSMUST00000159283	protein_coding	principal1	9	-1	106891979	2247
ENSMUSG00000031791	protein_coding	Tmem38a	ENSMUST00000211914	nonsense_mediated_decay		8	1	72572091	820
ENSMUSG00000097547	processed_transcript	B230110C06Rik	ENSMUST00000225651	retained_intron		14	1	15438155	1872
ENSMUSG00000051172	protein_coding	Olfr672	ENSMUST00000050599	protein_coding	principal1	7	-1	104996902	939
ENSMUSG00000029767	protein_coding	Calu	ENSMUST00000172974	protein_coding		6	1	29348069	3063
ENSMUSG00000096329	TR_V_gene	Trav13d-4	ENSMUST00000196079	TR_V_gene		14	1	53072763	331
ENSMUSG00000096329	TR_V_gene	Trav13d-4	ENSMUST00000103607	TR_V_gene	principal1	14	1	53073004	264
ENSMUSG00000043183	protein_coding	Simc1	ENSMUST00000121401	protein_coding	principal2	13	1	54503779	4819
ENSMUSG00000097547	processed_transcript	B230110C06Rik	ENSMUST00000181936	antisense		14	1	15438184	938
ENSMUSG00000043183	protein_coding	Simc1	ENSMUST00000118072	protein_coding	alternative2	13	1	54503779	2116
ENSMUSG00000032575	protein_coding	Manf	ENSMUST00000069036	protein_coding		9	-1	106891415	960
ENSMUSG00000077450	protein_coding	Rab11b	ENSMUST00000173860	protein_coding		17	-1	33760306	1544
ENSMUSG00000043183	protein_coding	Simc1	ENSMUST00000159721	protein_coding		13	1	54503804	510
ENSMUSG00000032575	protein_coding	Manf	ENSMUST00000160503	protein_coding		9	-1	106891870	510
ENSMUSG00000094619	TR_V_gene	Trav14d-3-dv8	ENSMUST00000103608	TR_V_gene	principal1	14	1	53078452	456
ENSMUSG00000077450	protein_coding	Rab11b	ENSMUST00000172894	protein_coding		17	-1	33749845	1028
ENSMUSG00000000804	protein_coding	Usp32	ENSMUST00000108075	protein_coding	principal1	11	-1	85140038	7053
ENSMUSG00000045201	protein_coding	Lrrc3b	ENSMUST00000163937	protein_coding	principal1	14	-1	15436505	1424
ENSMUSG00000032575	protein_coding	Manf	ENSMUST00000160978	retained_intron		9	-1	106891915	502
ENSMUSG00000106481	TR_V_pseudogene	Trav15d-3	ENSMUST00000198604	TR_V_pseudogene		14	1	53082354	167
ENSMUSG00000021180	protein_coding	Rps6ka5	ENSMUST00000221246	processed_transcript		12	-1	100713080	2915
ENSMUSG00000001794	protein_coding	Capns1	ENSMUST00000207082	retained_intron		7	-1	30192972	1241
ENSMUSG00000043183	protein_coding	Simc1	ENSMUST00000138869	nonsense_mediated_decay		13	1	54503809	574
ENSMUSG00000077450	protein_coding	Rab11b	ENSMUST00000173987	nonsense_mediated_decay		17	-1	33760280	924
ENSMUSG00000032575	protein_coding	Manf	ENSMUST00000162801	retained_intron		9	-1	106891917	741
ENSMUSG00000043183	protein_coding	Simc1	ENSMUST00000123852	processed_transcript		13	1	54512145	618
ENSMUSG00000021180	protein_coding	Rps6ka5	ENSMUST00000221356	protein_coding		12	-1	100575227	620
ENSMUSG00000039105	protein_coding	Atp6v1g1	ENSMUST00000035301	protein_coding	principal1	4	1	63544772	1135
ENSMUSG00000075469	processed_pseudogene	Gm17205	ENSMUST00000168370	processed_pseudogene		9	1	107047803	1207
ENSMUSG00000103908	lincRNA	Gm37502	ENSMUST00000192981	lincRNA		1	-1	170177772	356
ENSMUSG00000077450	protein_coding	Rab11b	ENSMUST00000174744	processed_transcript		17	-1	33760484	503
ENSMUSG00000021180	protein_coding	Rps6ka5	ENSMUST00000221379	processed_transcript		12	-1	100724501	1833
ENSMUSG00000104266	lincRNA	Gm37748	ENSMUST00000194379	lincRNA		1	1	170175180	1140
ENSMUSG00000021180	protein_coding	Rps6ka5	ENSMUST00000222403	processed_transcript		12	-1	100726983	1039
ENSMUSG00000045201	protein_coding	Lrrc3b	ENSMUST00000055211	protein_coding	principal1	14	-1	15438987	1655
ENSMUSG00000021180	protein_coding	Rps6ka5	ENSMUST00000221307	retained_intron		12	-1	100598595	3730
ENSMUSG00000000804	protein_coding	Usp32	ENSMUST00000000821	nonsense_mediated_decay		11	-1	85029135	3362
ENSMUSG00000021180	protein_coding	Rps6ka5	ENSMUST00000222347	processed_transcript		12	-1	100726944	519
ENSMUSG00000024856	protein_coding	Cdk2ap2	ENSMUST00000025779	protein_coding	principal1	19	1	4097182	1080
ENSMUSG00000095736	TR_V_gene	Trav7n-4	ENSMUST00000103609	TR_V_gene	principal1	14	1	53091346	341
ENSMUSG00000029767	protein_coding	Calu	ENSMUST00000031779	protein_coding	principal5	6	1	29348106	3229
ENSMUSG00000113687	TEC	Gm49703	ENSMUST00000223531	TEC		12	-1	100573976	2069
ENSMUSG00000045201	protein_coding	Lrrc3b	ENSMUST00000223700	protein_coding	principal1	14	-1	15438146	1426
ENSMUSG00000000804	protein_coding	Usp32	ENSMUST00000173156	protein_coding		11	-1	84988683	664
ENSMUSG00000029811	protein_coding	Aoc1	ENSMUST00000031835	protein_coding	principal1	6	1	48895254	2675
ENSMUSG00000021404	protein_coding	Serpinb9c	ENSMUST00000021837	protein_coding	alternative2	13	-1	33159742	1902
ENSMUSG00000113195	TEC	Gm48586	ENSMUST00000222512	TEC		12	-1	100623733	2058
ENSMUSG00000113250	TEC	Gm48585	ENSMUST00000221653	TEC		12	-1	100626793	2009
ENSMUSG00000092251	TR_V_pseudogene	Trav9n-1	ENSMUST00000185224	TR_V_pseudogene		14	1	53101801	339
ENSMUSG00000000804	protein_coding	Usp32	ENSMUST00000174602	protein_coding		11	-1	85040038	772
ENSMUSG00000023156	protein_coding	Rpp14	ENSMUST00000023924	protein_coding		14	1	8080367	2401
ENSMUSG00000079271	protein_coding	1700049E17Rik1	ENSMUST00000095985	protein_coding	principal1	14	1	41924949	1761
ENSMUSG00000024856	protein_coding	Cdk2ap2	ENSMUST00000174514	protein_coding		19	1	4097401	669
ENSMUSG00000043183	protein_coding	Simc1	ENSMUST00000150011	retained_intron		13	1	54528937	712
ENSMUSG00000078967	processed_pseudogene	Gapdh-ps16	ENSMUST00000181181	processed_pseudogene		8	-1	92716975	1229
ENSMUSG00000023156	protein_coding	Rpp14	ENSMUST00000180369	protein_coding	principal1	14	1	8090078	477
ENSMUSG00000083090	processed_pseudogene	Gm11736	ENSMUST00000121468	processed_pseudogene		11	1	113756702	505
ENSMUSG00000043183	protein_coding	Simc1	ENSMUST00000126506	retained_intron		13	1	54546783	840
ENSMUSG00000085395	lincRNA	Gm13056	ENSMUST00000142429	lincRNA		4	1	141278439	564
ENSMUSG00000114266	TEC	Gm10403	ENSMUST00000224637	TEC		14	1	15456331	1711
ENSMUSG00000114941	processed_pseudogene	Gm47779	ENSMUST00000223575	processed_pseudogene		14	-1	15602023	150
ENSMUSG00000029811	protein_coding	Aoc1	ENSMUST00000162948	protein_coding	principal1	6	1	48904986	2831
ENSMUSG00000114794	lincRNA	Gm47782	ENSMUST00000225006	lincRNA		14	-1	15911250	423
ENSMUSG00000114794	lincRNA	Gm47782	ENSMUST00000225517	lincRNA		14	-1	15911315	775
ENSMUSG00000025076	protein_coding	Casp7	ENSMUST00000026062	protein_coding	principal1	19	1	56397129	2350
ENSMUSG00000114513	lincRNA	Gm47780	ENSMUST00000225441	lincRNA		14	1	15876628	256
ENSMUSG00000114586	lincRNA	Gm31804	ENSMUST00000224585	lincRNA		14	1	15770099	2109
ENSMUSG00000114586	lincRNA	Gm31804	ENSMUST00000223909	lincRNA		14	1	15773689	2522
ENSMUSG00000114586	lincRNA	Gm31804	ENSMUST00000225565	lincRNA		14	1	15773689	1364
ENSMUSG00000114765	processed_pseudogene	Gm8514	ENSMUST00000223665	processed_pseudogene		14	1	15910518	1314
ENSMUSG00000021404	protein_coding	Serpinb9c	ENSMUST00000110284	protein_coding	principal3	13	-1	33158351	1575
ENSMUSG00000029811	protein_coding	Aoc1	ENSMUST00000161184	retained_intron		6	1	48907355	759
ENSMUSG00000029767	protein_coding	Calu	ENSMUST00000090481	protein_coding	alternative1	6	1	29348119	2670
ENSMUSG00000025076	protein_coding	Casp7	ENSMUST00000235178	retained_intron		19	1	56397260	1341
ENSMUSG00000029811	protein_coding	Aoc1	ENSMUST00000167529	protein_coding	principal1	6	1	48904986	2734
ENSMUSG00000024856	protein_coding	Cdk2ap2	ENSMUST00000172914	processed_transcript		19	1	4097401	1089
ENSMUSG00000000804	protein_coding	Usp32	ENSMUST00000172515	nonsense_mediated_decay		11	-1	85042680	486
ENSMUSG00000025076	protein_coding	Casp7	ENSMUST00000235386	processed_transcript		19	1	56397278	519
ENSMUSG00000030264	protein_coding	Thumpd3	ENSMUST00000032398	protein_coding	principal1	6	1	113046225	2163
ENSMUSG00000000804	protein_coding	Usp32	ENSMUST00000172950	retained_intron		11	-1	85053667	361
ENSMUSG00000021404	protein_coding	Serpinb9c	ENSMUST00000135897	protein_coding		13	-1	33158495	383
ENSMUSG00000000804	protein_coding	Usp32	ENSMUST00000173271	processed_transcript		11	-1	85140161	372
ENSMUSG00000025076	protein_coding	Casp7	ENSMUST00000238892	protein_coding		19	1	56425685	787
ENSMUSG00000000804	protein_coding	Usp32	ENSMUST00000172595	processed_transcript		11	-1	85139968	457
ENSMUSG00000025076	protein_coding	Casp7	ENSMUST00000237055	processed_transcript		19	1	56427198	842
ENSMUSG00000025076	protein_coding	Casp7	ENSMUST00000237765	retained_intron		19	1	56436696	1603
ENSMUSG00000030315	protein_coding	Vgll4	ENSMUST00000152710	processed_transcript		6	-1	114875107	2198
ENSMUSG00000030264	protein_coding	Thumpd3	ENSMUST00000155378	protein_coding		6	1	113046302	855
ENSMUSG00000117917	processed_pseudogene	Gm18087	ENSMUST00000237269	processed_pseudogene		18	-1	56916088	727
ENSMUSG00000024856	protein_coding	Cdk2ap2	ENSMUST00000174149	protein_coding		19	1	4097402	386
ENSMUSG00000000804	protein_coding	Usp32	ENSMUST00000174809	retained_intron		11	-1	85139929	566
ENSMUSG00000042641	protein_coding	Rgsl1	ENSMUST00000141249	protein_coding		1	-1	153808164	1752
ENSMUSG00000029767	protein_coding	Calu	ENSMUST00000174096	nonsense_mediated_decay		6	1	29356471	1670
ENSMUSG00000024856	protein_coding	Cdk2ap2	ENSMUST00000174799	nonsense_mediated_decay		19	1	4097402	843
ENSMUSG00000049372	protein_coding	Olfr1183	ENSMUST00000219871	protein_coding	principal1	2	1	88454867	8353
ENSMUSG00000102580	processed_pseudogene	Gm37442	ENSMUST00000191915	processed_pseudogene		Y	-1	18864085	567
ENSMUSG00000029767	protein_coding	Calu	ENSMUST00000156163	protein_coding		6	1	29361461	1137
ENSMUSG00000049372	protein_coding	Olfr1183	ENSMUST00000213115	protein_coding		2	1	88454867	8258
ENSMUSG00000030264	protein_coding	Thumpd3	ENSMUST00000137396	retained_intron		6	1	113046315	1764
ENSMUSG00000036896	protein_coding	C1qc	ENSMUST00000046332	protein_coding	principal1	4	-1	136893065	1203
ENSMUSG00000026604	protein_coding	Ptpn14	ENSMUST00000097442	protein_coding	principal2	1	1	189728268	10746
ENSMUSG00000049372	protein_coding	Olfr1183	ENSMUST00000102618	protein_coding	principal1	2	1	88461342	912
ENSMUSG00000082332	processed_pseudogene	Gm13384	ENSMUST00000117166	processed_pseudogene		2	-1	6133956	1344
ENSMUSG00000047888	protein_coding	Tnrc6b	ENSMUST00000067689	protein_coding	principal1	15	1	80711313	17332
ENSMUSG00000030264	protein_coding	Thumpd3	ENSMUST00000145054	retained_intron		6	1	113046327	558
ENSMUSG00000029767	protein_coding	Calu	ENSMUST00000172607	protein_coding		6	1	29372553	648
ENSMUSG00000037376	protein_coding	Trmt6	ENSMUST00000039554	protein_coding	principal1	2	-1	132816054	2828
ENSMUSG00000030264	protein_coding	Thumpd3	ENSMUST00000152795	retained_intron		6	1	113046357	638
ENSMUSG00000029767	protein_coding	Calu	ENSMUST00000138523	processed_transcript		6	1	29373666	762
ENSMUSG00000102887	lincRNA	Gm10857	ENSMUST00000195343	lincRNA		2	1	6132869	2794
ENSMUSG00000030264	protein_coding	Thumpd3	ENSMUST00000138278	protein_coding		6	1	113046458	371
ENSMUSG00000102887	lincRNA	Gm10857	ENSMUST00000195480	lincRNA		2	1	6132883	2720
ENSMUSG00000036896	protein_coding	C1qc	ENSMUST00000153104	processed_transcript		4	-1	136892876	946
ENSMUSG00000051424	protein_coding	Olfr1184	ENSMUST00000216675	protein_coding	principal1	2	1	88483598	3164
ENSMUSG00000030264	protein_coding	Thumpd3	ENSMUST00000204866	protein_coding		6	1	113046755	727
ENSMUSG00000051424	protein_coding	Olfr1184	ENSMUST00000050038	protein_coding	principal1	2	1	88486734	936
ENSMUSG00000116290	lincRNA	Gm49518	ENSMUST00000230357	lincRNA		16	1	24039906	1771
ENSMUSG00000047888	protein_coding	Tnrc6b	ENSMUST00000226857	retained_intron		15	1	80798642	3240
ENSMUSG00000030264	protein_coding	Thumpd3	ENSMUST00000134657	processed_transcript		6	1	113047415	649
ENSMUSG00000030264	protein_coding	Thumpd3	ENSMUST00000204786	retained_intron		6	1	113057950	3072
ENSMUSG00000116437	lincRNA	Gm46545	ENSMUST00000230580	lincRNA		16	-1	24082690	1497
ENSMUSG00000057735	protein_coding	Olfr1185-ps1	ENSMUST00000075025	protein_coding	principal1	2	1	88493320	3344
ENSMUSG00000079539	protein_coding	Obp2b	ENSMUST00000114192	protein_coding	principal1	2	1	25737009	732
ENSMUSG00000102273	lincRNA	Gm34550	ENSMUST00000191625	lincRNA		Y	1	18933163	352
ENSMUSG00000030264	protein_coding	Thumpd3	ENSMUST00000153310	retained_intron		6	1	113065426	692
ENSMUSG00000102273	lincRNA	Gm34550	ENSMUST00000195186	lincRNA		Y	1	18933163	537
ENSMUSG00000025969	protein_coding	Nrp2	ENSMUST00000075144	protein_coding		1	1	62703285	6723
ENSMUSG00000086429	antisense	Gt(ROSA)26Sor	ENSMUST00000167415	antisense		6	-1	113077191	551
ENSMUSG00000047888	protein_coding	Tnrc6b	ENSMUST00000228071	retained_intron		15	1	80798715	5215
ENSMUSG00000047888	protein_coding	Tnrc6b	ENSMUST00000228124	protein_coding		15	1	80880698	3407
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000230600	processed_transcript		15	1	102203249	374
ENSMUSG00000086429	antisense	Gt(ROSA)26Sor	ENSMUST00000133467	antisense		6	-1	113077177	412
ENSMUSG00000002728	protein_coding	Naa20	ENSMUST00000110000	protein_coding	principal1	2	1	145903241	1142
ENSMUSG00000047888	protein_coding	Tnrc6b	ENSMUST00000227546	retained_intron		15	1	80882673	620
ENSMUSG00000047888	protein_coding	Tnrc6b	ENSMUST00000228320	retained_intron		15	1	80884350	376
ENSMUSG00000037376	protein_coding	Trmt6	ENSMUST00000147336	processed_transcript		2	-1	132816055	2948
ENSMUSG00000047888	protein_coding	Tnrc6b	ENSMUST00000227449	protein_coding		15	1	80889150	183
ENSMUSG00000037376	protein_coding	Trmt6	ENSMUST00000145117	processed_transcript		2	-1	132815758	458
ENSMUSG00000026604	protein_coding	Ptpn14	ENSMUST00000194127	retained_intron		1	1	189728275	1523
ENSMUSG00000047888	protein_coding	Tnrc6b	ENSMUST00000226461	retained_intron		15	1	80901886	2053
ENSMUSG00000037376	protein_coding	Trmt6	ENSMUST00000136897	processed_transcript		2	-1	132812507	637
ENSMUSG00000047888	protein_coding	Tnrc6b	ENSMUST00000226442	retained_intron		15	1	80915916	3302
ENSMUSG00000006057	protein_coding	Atp5g1	ENSMUST00000090541	protein_coding	principal1	11	-1	96075670	4715
ENSMUSG00000032656	protein_coding	Marchf3	ENSMUST00000102912	protein_coding		18	-1	56925548	1754
ENSMUSG00000086429	antisense	Gt(ROSA)26Sor	ENSMUST00000124246	antisense		6	-1	113077210	1181
ENSMUSG00000026604	protein_coding	Ptpn14	ENSMUST00000128275	retained_intron		1	1	189786636	3158
ENSMUSG00000047888	protein_coding	Tnrc6b	ENSMUST00000228525	retained_intron		15	1	80923064	1774
ENSMUSG00000002728	protein_coding	Naa20	ENSMUST00000002805	protein_coding		2	1	145903241	1172
ENSMUSG00000037376	protein_coding	Trmt6	ENSMUST00000127855	processed_transcript		2	-1	132816013	619
ENSMUSG00000006057	protein_coding	Atp5g1	ENSMUST00000107686	protein_coding	principal1	11	-1	96075581	691
ENSMUSG00000026604	protein_coding	Ptpn14	ENSMUST00000027898	protein_coding	alternative2	1	1	189786672	2666
ENSMUSG00000032656	protein_coding	Marchf3	ENSMUST00000035278	protein_coding	principal1	18	-1	56812019	860
ENSMUSG00000042641	protein_coding	Rgsl1	ENSMUST00000238926	protein_coding	alternative2	1	-1	153844142	3747
ENSMUSG00000026604	protein_coding	Ptpn14	ENSMUST00000195038	retained_intron		1	1	189845043	3810
ENSMUSG00000042641	protein_coding	Rgsl1	ENSMUST00000124558	protein_coding	principal2	1	-1	153844142	3642
ENSMUSG00000032656	protein_coding	Marchf3	ENSMUST00000153044	retained_intron		18	-1	56925515	4653
ENSMUSG00000086429	antisense	Gt(ROSA)26Sor	ENSMUST00000159544	antisense		6	-1	113077333	822
ENSMUSG00000026604	protein_coding	Ptpn14	ENSMUST00000148129	processed_transcript		1	1	189862659	585
ENSMUSG00000002728	protein_coding	Naa20	ENSMUST00000129502	retained_intron		2	1	145911900	830
ENSMUSG00000102248	processed_pseudogene	Gm30280	ENSMUST00000192214	processed_pseudogene		1	1	189827230	262
ENSMUSG00000001794	protein_coding	Capns1	ENSMUST00000001845	protein_coding	principal2	7	-1	30198811	1600
ENSMUSG00000058831	protein_coding	Opn1sw	ENSMUST00000080428	protein_coding	principal1	6	-1	29380513	2410
ENSMUSG00000002728	protein_coding	Naa20	ENSMUST00000150316	protein_coding		2	1	145902099	342
ENSMUSG00000022718	protein_coding	Dgcr8	ENSMUST00000009321	protein_coding	principal1	16	-1	18289246	4320
ENSMUSG00000087597	antisense	Gm15345	ENSMUST00000128240	antisense		18	1	56769717	663
ENSMUSG00000001794	protein_coding	Capns1	ENSMUST00000108196	protein_coding	alternative2	7	-1	30193106	1192
ENSMUSG00000032537	protein_coding	Ephb1	ENSMUST00000035129	protein_coding	principal1	9	-1	102354693	4667
ENSMUSG00000002728	protein_coding	Naa20	ENSMUST00000134759	protein_coding		2	1	145903294	1883
ENSMUSG00000001794	protein_coding	Capns1	ENSMUST00000148973	retained_intron		7	-1	30190226	600
ENSMUSG00000058831	protein_coding	Opn1sw	ENSMUST00000147483	protein_coding		6	-1	29380431	1426
ENSMUSG00000002728	protein_coding	Naa20	ENSMUST00000136330	retained_intron		2	1	145903297	417
ENSMUSG00000006057	protein_coding	Atp5g1	ENSMUST00000107684	protein_coding	principal1	11	-1	96075619	596
ENSMUSG00000032537	protein_coding	Ephb1	ENSMUST00000085169	protein_coding		9	-1	102354693	4101
ENSMUSG00000001794	protein_coding	Capns1	ENSMUST00000129761	processed_transcript		7	-1	30193781	1157
ENSMUSG00000002728	protein_coding	Naa20	ENSMUST00000169732	protein_coding		2	1	145903257	388
ENSMUSG00000058831	protein_coding	Opn1sw	ENSMUST00000131928	processed_transcript		6	-1	29380413	743
ENSMUSG00000042641	protein_coding	Rgsl1	ENSMUST00000184095	nonsense_mediated_decay		1	-1	153825306	1985
ENSMUSG00000026936	protein_coding	Lcn3	ENSMUST00000239498	protein_coding	alternative2	2	1	25765569	684
ENSMUSG00000026936	protein_coding	Lcn3	ENSMUST00000028304	protein_coding	principal2	2	1	25765569	684
ENSMUSG00000031231	protein_coding	Cox7b	ENSMUST00000033582	protein_coding	principal1	X	1	106015700	1001
ENSMUSG00000032537	protein_coding	Ephb1	ENSMUST00000217014	processed_transcript		9	-1	101940899	1263
ENSMUSG00000001794	protein_coding	Capns1	ENSMUST00000141851	retained_intron		7	-1	30192410	507
ENSMUSG00000032537	protein_coding	Ephb1	ENSMUST00000217184	processed_transcript		9	-1	101940899	1419
ENSMUSG00000058831	protein_coding	Opn1sw	ENSMUST00000173653	protein_coding		6	-1	29388468	408
ENSMUSG00000002728	protein_coding	Naa20	ENSMUST00000149461	nonsense_mediated_decay		2	1	145903262	477
ENSMUSG00000042641	protein_coding	Rgsl1	ENSMUST00000145308	processed_transcript		1	-1	153790770	484
ENSMUSG00000032537	protein_coding	Ephb1	ENSMUST00000215514	processed_transcript		9	-1	101940567	1366
ENSMUSG00000042641	protein_coding	Rgsl1	ENSMUST00000185164	nonsense_mediated_decay		1	-1	153844134	3130
ENSMUSG00000032537	protein_coding	Ephb1	ENSMUST00000149800	protein_coding		9	-1	102354693	3471
ENSMUSG00000001794	protein_coding	Capns1	ENSMUST00000146852	retained_intron		7	-1	30195036	587
ENSMUSG00000031231	protein_coding	Cox7b	ENSMUST00000152398	processed_transcript		X	1	106015716	180
ENSMUSG00000042641	protein_coding	Rgsl1	ENSMUST00000134030	retained_intron		1	-1	153821512	2503
ENSMUSG00000002728	protein_coding	Naa20	ENSMUST00000165635	nonsense_mediated_decay		2	1	145903253	331
ENSMUSG00000099883	unprocessed_pseudogene	Gm21784	ENSMUST00000186639	unprocessed_pseudogene		Y	-1	74226538	694
ENSMUSG00000042641	protein_coding	Rgsl1	ENSMUST00000206321	processed_transcript		1	-1	153813838	807
ENSMUSG00000031231	protein_coding	Cox7b	ENSMUST00000155377	retained_intron		X	1	106019391	526
ENSMUSG00000117436	processed_pseudogene	Gm9474	ENSMUST00000234412	processed_pseudogene		18	-1	14924111	2057
ENSMUSG00000101648	sense_intronic	Gm29388	ENSMUST00000190718	sense_intronic		9	-1	102153717	284
ENSMUSG00000006057	protein_coding	Atp5g1	ENSMUST00000178611	protein_coding	principal1	11	-1	96075037	4660
ENSMUSG00000001794	protein_coding	Capns1	ENSMUST00000126116	protein_coding	principal2	7	-1	30195048	1429
ENSMUSG00000030315	protein_coding	Vgll4	ENSMUST00000032459	protein_coding	principal1	6	-1	114921821	2028
ENSMUSG00000104282	TEC	Gm37460	ENSMUST00000191796	TEC		9	-1	101913256	2249
ENSMUSG00000000901	protein_coding	Mmp11	ENSMUST00000132869	nonsense_mediated_decay		10	-1	75923993	335
ENSMUSG00000029813	protein_coding	Doxl1	ENSMUST00000031837	protein_coding	principal1	6	1	48929895	2485
ENSMUSG00000100363	unprocessed_pseudogene	Gm20805	ENSMUST00000186299	unprocessed_pseudogene		Y	-1	74300895	696
ENSMUSG00000102702	TEC	Gm37260	ENSMUST00000193748	TEC		9	1	102273736	1251
ENSMUSG00000097817	antisense	Gm26810	ENSMUST00000208688	antisense		7	1	30193954	779
ENSMUSG00000049553	protein_coding	Polr1a	ENSMUST00000206556	nonsense_mediated_decay		6	1	71909053	3394
ENSMUSG00000102963	TEC	Gm37945	ENSMUST00000192536	TEC		9	1	102172738	4367
ENSMUSG00000100276	unprocessed_pseudogene	Gm29618	ENSMUST00000191423	unprocessed_pseudogene		Y	-1	74330574	615
ENSMUSG00000097817	antisense	Gm26810	ENSMUST00000181153	antisense		7	1	30198630	1106
ENSMUSG00000100807	processed_transcript	Gm29521	ENSMUST00000216148	lincRNA		9	-1	101828693	805
ENSMUSG00000030315	protein_coding	Vgll4	ENSMUST00000123478	processed_transcript		6	-1	114864757	871
ENSMUSG00000030315	protein_coding	Vgll4	ENSMUST00000155620	processed_transcript		6	-1	114875020	822
ENSMUSG00000027605	protein_coding	Acss2	ENSMUST00000029135	protein_coding	principal2	2	1	155517948	2931
ENSMUSG00000068537	processed_pseudogene	Gm10242	ENSMUST00000090064	processed_pseudogene		6	-1	48940127	330
ENSMUSG00000100807	processed_transcript	Gm29521	ENSMUST00000187061	lincRNA		9	-1	101862447	745
ENSMUSG00000078498	protein_coding	Zfp988	ENSMUST00000148762	protein_coding	principal1	4	1	147305674	2800
ENSMUSG00000100807	processed_transcript	Gm29521	ENSMUST00000216859	lincRNA		9	-1	101862408	279
ENSMUSG00000107943	processed_pseudogene	Gm18538	ENSMUST00000204265	processed_pseudogene		6	1	48956358	484
ENSMUSG00000078498	protein_coding	Zfp988	ENSMUST00000166764	protein_coding		4	1	147332407	63
ENSMUSG00000090330	antisense	9130221H12Rik	ENSMUST00000190693	antisense		7	1	25228723	1541
ENSMUSG00000100807	processed_transcript	Gm29521	ENSMUST00000187746	retained_intron		9	-1	101862489	3123
ENSMUSG00000107692	processed_pseudogene	Gm19172	ENSMUST00000203170	processed_pseudogene		6	1	48962883	1246
ENSMUSG00000090330	antisense	9130221H12Rik	ENSMUST00000169914	antisense		7	1	25228687	1465
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000041314	protein_coding	principal1	18	1	35598617	1475
ENSMUSG00000104041	TEC	Gm37562	ENSMUST00000194763	TEC		9	-1	102056557	4328
ENSMUSG00000025793	protein_coding	Hgs	ENSMUST00000141826	processed_transcript		11	1	120467635	829
ENSMUSG00000030244	protein_coding	Gys2	ENSMUST00000032371	protein_coding	principal1	6	-1	142473109	2657
ENSMUSG00000103026	TEC	Gm31326	ENSMUST00000191856	TEC		9	1	101989260	1048
ENSMUSG00000027605	protein_coding	Acss2	ENSMUST00000149788	retained_intron		2	1	155518033	3563
ENSMUSG00000112910	lincRNA	Gm29685	ENSMUST00000219670	lincRNA		10	1	107946645	2365
ENSMUSG00000057710	protein_coding	9630041A04Rik	ENSMUST00000214589	processed_transcript		9	1	101861841	1037
ENSMUSG00000030315	protein_coding	Vgll4	ENSMUST00000147639	protein_coding		6	-1	114969180	1023
ENSMUSG00000057710	protein_coding	9630041A04Rik	ENSMUST00000214127	processed_transcript		9	1	101861846	1192
ENSMUSG00000057710	protein_coding	9630041A04Rik	ENSMUST00000214563	processed_transcript		9	1	101861846	1342
ENSMUSG00000048379	protein_coding	Socs4	ENSMUST00000065562	protein_coding	principal1	14	1	47276931	6877
ENSMUSG00000027605	protein_coding	Acss2	ENSMUST00000065973	protein_coding		2	1	155518057	2876
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000236666	protein_coding	principal1	18	1	35598624	713
ENSMUSG00000030315	protein_coding	Vgll4	ENSMUST00000139640	protein_coding		6	-1	114969994	860
ENSMUSG00000115710	bidirectional_promoter_lncRNA	Gm49208	ENSMUST00000228386	bidirectional_promoter_lncRNA		15	1	31453738	397
ENSMUSG00000030244	protein_coding	Gys2	ENSMUST00000126939	protein_coding		6	-1	142423619	314
ENSMUSG00000030315	protein_coding	Vgll4	ENSMUST00000204693	retained_intron		6	-1	114921816	1763
ENSMUSG00000057710	protein_coding	9630041A04Rik	ENSMUST00000112841	protein_coding	principal1	9	1	101938481	974
ENSMUSG00000047370	processed_pseudogene	Gm7367	ENSMUST00000057611	processed_pseudogene		7	1	60155609	492
ENSMUSG00000027605	protein_coding	Acss2	ENSMUST00000131054	retained_intron		2	1	155518069	3609
ENSMUSG00000109451	processed_pseudogene	Gm18129	ENSMUST00000208834	processed_pseudogene		7	1	60272860	1044
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000236020	protein_coding	principal1	18	1	35598641	857
ENSMUSG00000048379	protein_coding	Socs4	ENSMUST00000227413	protein_coding		14	1	47277165	538
ENSMUSG00000027605	protein_coding	Acss2	ENSMUST00000103142	protein_coding	alternative1	2	1	155518107	2145
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000235400	protein_coding	principal1	18	1	35598649	1522
ENSMUSG00000037169	protein_coding	Mycn	ENSMUST00000043396	protein_coding	principal1	12	-1	12941914	2674
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000236868	protein_coding	principal1	18	1	35598696	683
ENSMUSG00000078497	protein_coding	Zfp978	ENSMUST00000133078	protein_coding	alternative2	4	1	147361303	572
ENSMUSG00000078497	protein_coding	Zfp978	ENSMUST00000154154	protein_coding	principal5	4	1	147361311	1250
ENSMUSG00000037169	protein_coding	Mycn	ENSMUST00000130990	protein_coding	principal1	12	-1	12940616	2522
ENSMUSG00000000056	protein_coding	Narf	ENSMUST00000103015	protein_coding	principal1	11	1	121237253	4395
ENSMUSG00000096354	processed_pseudogene	Gm8178	ENSMUST00000121570	processed_pseudogene		4	1	147378929	646
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000235210	protein_coding	principal1	18	1	35599237	766
ENSMUSG00000027605	protein_coding	Acss2	ENSMUST00000133654	nonsense_mediated_decay		2	1	155518107	1646
ENSMUSG00000100084	antisense	2310068J16Rik	ENSMUST00000188271	antisense		15	-1	99973287	1130
ENSMUSG00000037169	protein_coding	Mycn	ENSMUST00000151534	processed_transcript		12	-1	12941825	681
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000235476	protein_coding	principal1	18	1	35599584	1569
ENSMUSG00000112401	processed_pseudogene	Gm47999	ENSMUST00000219675	processed_pseudogene		10	-1	108142432	745
ENSMUSG00000027605	protein_coding	Acss2	ENSMUST00000143169	retained_intron		2	1	155549221	445
ENSMUSG00000101318	unprocessed_pseudogene	Gm29109	ENSMUST00000185895	unprocessed_pseudogene		Y	-1	74367482	696
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000236414	protein_coding	principal1	18	1	35600065	718
ENSMUSG00000082248	processed_pseudogene	Gm13161	ENSMUST00000120609	processed_pseudogene		4	1	147443471	559
ENSMUSG00000027605	protein_coding	Acss2	ENSMUST00000151781	protein_coding		2	1	155549232	879
ENSMUSG00000093975	unprocessed_pseudogene	Vmn2r-ps19	ENSMUST00000179720	unprocessed_pseudogene		4	1	147444380	269
ENSMUSG00000000056	protein_coding	Narf	ENSMUST00000154047	retained_intron		11	1	121244538	435
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000235211	retained_intron		18	1	35608107	804
ENSMUSG00000000056	protein_coding	Narf	ENSMUST00000151088	retained_intron		11	1	121245020	525
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000238138	retained_intron		18	1	35610284	854
ENSMUSG00000037058	protein_coding	Paip2	ENSMUST00000237730	retained_intron		18	1	35610985	602
ENSMUSG00000027605	protein_coding	Acss2	ENSMUST00000153975	processed_transcript		2	1	155568550	456
ENSMUSG00000076800	TR_V_gene	Trav6n-5	ENSMUST00000103611	TR_V_gene	principal1	14	1	53104871	338
ENSMUSG00000027605	protein_coding	Acss2	ENSMUST00000148870	retained_intron		2	1	155572862	646
ENSMUSG00000093624	processed_pseudogene	Mipep-ps	ENSMUST00000177439	processed_pseudogene		2	1	155542647	291
ENSMUSG00000022718	protein_coding	Dgcr8	ENSMUST00000115633	retained_intron		16	-1	18284535	3436
ENSMUSG00000087616	antisense	Gm14257	ENSMUST00000144649	antisense		2	-1	155594475	765
ENSMUSG00000022718	protein_coding	Dgcr8	ENSMUST00000152033	processed_transcript		16	-1	18265269	1246
ENSMUSG00000027366	protein_coding	Sppl2a	ENSMUST00000028844	protein_coding	principal1	2	-1	126933235	5616
ENSMUSG00000085317	antisense	Gssos2	ENSMUST00000130859	antisense		2	1	155591131	727
ENSMUSG00000085317	antisense	Gssos2	ENSMUST00000155884	antisense		2	1	155591881	674
ENSMUSG00000022718	protein_coding	Dgcr8	ENSMUST00000144536	retained_intron		16	-1	18257130	623
ENSMUSG00000038170	protein_coding	Pde4dip	ENSMUST00000168438	protein_coding	alternative2	3	-1	97888707	8264
ENSMUSG00000022718	protein_coding	Dgcr8	ENSMUST00000232476	processed_transcript		16	-1	18278066	293
ENSMUSG00000027366	protein_coding	Sppl2a	ENSMUST00000143700	protein_coding		2	-1	126920345	760
ENSMUSG00000022718	protein_coding	Dgcr8	ENSMUST00000128856	retained_intron		16	-1	18284563	3410
ENSMUSG00000086529	antisense	Acss2os	ENSMUST00000148685	antisense		2	-1	155556930	629
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000190837	protein_coding	alternative2	7	1	90348699	3757
ENSMUSG00000038170	protein_coding	Pde4dip	ENSMUST00000200063	processed_transcript		3	-1	97695023	414
ENSMUSG00000035062	protein_coding	Zc4h2	ENSMUST00000120620	protein_coding		X	-1	95658408	2156
ENSMUSG00000063383	protein_coding	Zfp947	ENSMUST00000080249	protein_coding	principal1	17	-1	22166190	2872
ENSMUSG00000022718	protein_coding	Dgcr8	ENSMUST00000156274	retained_intron		16	-1	18280246	2575
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000107211	protein_coding	principal4	7	1	90348699	3790
ENSMUSG00000038170	protein_coding	Pde4dip	ENSMUST00000090750	protein_coding	alternative2	3	-1	97888707	8376
ENSMUSG00000104256	lincRNA	Gm37173	ENSMUST00000194498	lincRNA		17	1	50210135	1002
ENSMUSG00000027366	protein_coding	Sppl2a	ENSMUST00000125592	retained_intron		2	-1	126923688	3503
ENSMUSG00000117138	processed_pseudogene	Gm9191	ENSMUST00000232865	processed_pseudogene		17	-1	50214206	1456
ENSMUSG00000117252	processed_pseudogene	Gm9514	ENSMUST00000233487	processed_pseudogene		17	-1	22186108	1345
ENSMUSG00000037408	protein_coding	Cnnm4	ENSMUST00000153128	protein_coding	principal1	1	1	36471620	4547
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000190731	protein_coding	alternative2	7	1	90348699	3838
ENSMUSG00000117077	processed_pseudogene	Gm18735	ENSMUST00000233703	processed_pseudogene		17	-1	50228369	584
ENSMUSG00000038170	protein_coding	Pde4dip	ENSMUST00000197791	processed_transcript		3	-1	97697267	536
ENSMUSG00000022718	protein_coding	Dgcr8	ENSMUST00000232424	protein_coding		16	-1	18289231	767
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000107210	protein_coding	alternative2	7	1	90348699	3718
ENSMUSG00000022718	protein_coding	Dgcr8	ENSMUST00000232414	processed_transcript		16	-1	18289231	442
ENSMUSG00000117009	lincRNA	Gm41597	ENSMUST00000232953	lincRNA		17	-1	50236556	415
ENSMUSG00000037408	protein_coding	Cnnm4	ENSMUST00000192530	retained_intron		1	1	36471996	1372
ENSMUSG00000022718	protein_coding	Dgcr8	ENSMUST00000134431	processed_transcript		16	-1	18289170	98
ENSMUSG00000104316	TEC	Gm37909	ENSMUST00000193157	TEC		1	1	36473952	2159
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000118729	protein_coding	alternative2	15	1	102203648	4241
ENSMUSG00000109220	processed_pseudogene	Gm30196	ENSMUST00000208957	processed_pseudogene		7	1	60293204	160
ENSMUSG00000078496	protein_coding	Zfp982	ENSMUST00000105721	protein_coding	principal1	4	1	147492417	1488
ENSMUSG00000116925	protein_coding	Gm49776	ENSMUST00000232144	nonsense_mediated_decay	principal1	16	-1	18258321	608
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000190365	protein_coding	alternative2	7	1	90348699	7279
ENSMUSG00000067103	lincRNA	AY702103	ENSMUST00000180996	lincRNA		17	1	50239208	5876
ENSMUSG00000038170	protein_coding	Pde4dip	ENSMUST00000045243	protein_coding	principal3	3	-1	97768009	6185
ENSMUSG00000109447	processed_pseudogene	Gm3198	ENSMUST00000208725	processed_pseudogene		7	1	60643891	1026
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000239078	protein_coding	alternative2	7	1	90348699	7447
ENSMUSG00000067103	lincRNA	AY702103	ENSMUST00000086914	lincRNA		17	1	50239404	2121
ENSMUSG00000078496	protein_coding	Zfp982	ENSMUST00000063704	protein_coding	principal1	4	1	147507600	1244
ENSMUSG00000075604	protein_coding	Cyp11b1	ENSMUST00000170259	protein_coding	principal1	15	-1	74841643	3165
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000207455	retained_intron		7	1	90375785	1998
ENSMUSG00000038170	protein_coding	Pde4dip	ENSMUST00000175751	nonsense_mediated_decay		3	-1	97767931	4658
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000207431	processed_transcript		7	1	90383853	370
ENSMUSG00000020908	protein_coding	Myh3	ENSMUST00000108689	protein_coding	principal1	11	1	67078300	6031
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000207629	retained_intron		7	1	90384511	2274
ENSMUSG00000038170	protein_coding	Pde4dip	ENSMUST00000107038	protein_coding		3	-1	97868248	2826
ENSMUSG00000025969	protein_coding	Nrp2	ENSMUST00000027112	protein_coding		1	1	62703702	4216
ENSMUSG00000038170	protein_coding	Pde4dip	ENSMUST00000200232	protein_coding		3	-1	97824621	484
ENSMUSG00000000901	protein_coding	Mmp11	ENSMUST00000120281	protein_coding	principal1	10	-1	75932475	1793
ENSMUSG00000096433	protein_coding	Zfp994	ENSMUST00000179996	protein_coding	principal1	17	-1	22225616	4882
ENSMUSG00000020908	protein_coding	Myh3	ENSMUST00000007301	protein_coding	principal1	11	1	67078300	5992
ENSMUSG00000020908	protein_coding	Myh3	ENSMUST00000165221	protein_coding	principal1	11	1	67078300	5994
ENSMUSG00000025969	protein_coding	Nrp2	ENSMUST00000114155	protein_coding		1	1	62703702	6534
ENSMUSG00000035062	protein_coding	Zc4h2	ENSMUST00000119640	protein_coding		X	-1	95658383	2075
ENSMUSG00000068600	protein_coding	Gml2	ENSMUST00000096399	protein_coding	principal2	15	1	74819071	808
ENSMUSG00000117284	protein_coding	Gm7072	ENSMUST00000233465	protein_coding	principal1	17	-1	22314837	3474
ENSMUSG00000000901	protein_coding	Mmp11	ENSMUST00000000924	protein_coding	principal1	10	-1	75932502	2288
ENSMUSG00000068600	protein_coding	Gml2	ENSMUST00000188180	protein_coding	alternative2	15	1	74819088	649
ENSMUSG00000034161	protein_coding	Scx	ENSMUST00000229271	retained_intron		15	1	76457452	2007
ENSMUSG00000000901	protein_coding	Mmp11	ENSMUST00000152222	protein_coding		10	-1	75925677	579
ENSMUSG00000024354	protein_coding	Slc23a1	ENSMUST00000025212	protein_coding	principal1	18	-1	35627244	3026
ENSMUSG00000026198	protein_coding	Abcb6	ENSMUST00000027396	protein_coding	principal1	1	-1	75180392	2966
ENSMUSG00000000901	protein_coding	Mmp11	ENSMUST00000133897	retained_intron		10	-1	75927690	792
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000119168	protein_coding		15	1	102203659	3932
ENSMUSG00000053318	protein_coding	Slamf8	ENSMUST00000065679	protein_coding	principal1	1	-1	172590568	1659
ENSMUSG00000000901	protein_coding	Mmp11	ENSMUST00000219728	protein_coding		10	-1	75936496	674
ENSMUSG00000068600	protein_coding	Gml2	ENSMUST00000188458	processed_transcript		15	1	74823065	726
ENSMUSG00000034161	protein_coding	Scx	ENSMUST00000043089	protein_coding	principal1	15	1	76457520	1035
ENSMUSG00000068600	protein_coding	Gml2	ENSMUST00000186752	processed_transcript		15	1	74823065	688
ENSMUSG00000053318	protein_coding	Slamf8	ENSMUST00000193843	retained_intron		1	-1	172590449	1471
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000141465	protein_coding		15	1	102203691	989
ENSMUSG00000038170	protein_coding	Pde4dip	ENSMUST00000163531	retained_intron		3	-1	97868197	3845
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000139960	protein_coding		15	1	102203709	998
ENSMUSG00000025969	protein_coding	Nrp2	ENSMUST00000063594	protein_coding	alternative1	1	1	62703702	6342
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000230867	protein_coding	alternative2	15	1	102204578	744
ENSMUSG00000050157	protein_coding	Gm867	ENSMUST00000059658	processed_transcript		10	-1	75940672	1221
ENSMUSG00000115728	processed_pseudogene	Gm49190	ENSMUST00000227470	processed_pseudogene		14	-1	47321056	647
ENSMUSG00000025969	protein_coding	Nrp2	ENSMUST00000114157	protein_coding	principal4	1	1	62703702	6357
ENSMUSG00000021840	protein_coding	Mapk1ip1l	ENSMUST00000227941	retained_intron		14	1	47298266	3105
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000119800	protein_coding	principal3	15	1	102204609	3882
ENSMUSG00000050157	protein_coding	Gm867	ENSMUST00000219979	protein_coding	principal1	10	-1	75940611	714
ENSMUSG00000035062	protein_coding	Zc4h2	ENSMUST00000044382	protein_coding	principal1	X	-1	95658509	2219
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000121206	retained_intron		15	1	102204746	795
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000133986	protein_coding		15	1	102204780	674
ENSMUSG00000095416	IG_V_gene	Ighv1-12	ENSMUST00000195469	IG_V_gene		12	-1	114616318	386
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000229886	protein_coding		15	1	102206559	541
ENSMUSG00000095416	IG_V_gene	Ighv1-12	ENSMUST00000109711	IG_V_gene		12	-1	114616318	215
ENSMUSG00000095416	IG_V_gene	Ighv1-12	ENSMUST00000103500	IG_V_gene	principal1	12	-1	114616143	294
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000123528	retained_intron		15	1	102207618	680
ENSMUSG00000103467	TEC	Gm38245	ENSMUST00000191702	TEC		1	-1	189915959	2621
ENSMUSG00000095510	protein_coding	Rhox3f	ENSMUST00000184451	protein_coding	principal1	X	1	37580992	1008
ENSMUSG00000049553	protein_coding	Polr1a	ENSMUST00000055296	protein_coding	principal1	6	1	71909061	9216
ENSMUSG00000104435	antisense	Gm37422	ENSMUST00000193794	antisense		1	1	189879935	4718
ENSMUSG00000049422	protein_coding	Chchd10	ENSMUST00000219839	protein_coding	principal1	10	1	75933130	1488
ENSMUSG00000026198	protein_coding	Abcb6	ENSMUST00000160081	retained_intron		1	-1	75180286	3772
ENSMUSG00000049422	protein_coding	Chchd10	ENSMUST00000219435	retained_intron		10	1	75937220	405
ENSMUSG00000095510	protein_coding	Rhox3f	ENSMUST00000185008	protein_coding		X	1	37581481	477
ENSMUSG00000026198	protein_coding	Abcb6	ENSMUST00000161215	protein_coding		1	-1	75172869	416
ENSMUSG00000095510	protein_coding	Rhox3f	ENSMUST00000183696	protein_coding		X	1	37581481	658
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000106992	protein_coding	alternative2	11	1	104231390	5253
ENSMUSG00000033009	protein_coding	Ogfod1	ENSMUST00000109556	protein_coding	principal2	8	1	94037198	5310
ENSMUSG00000095510	protein_coding	Rhox3f	ENSMUST00000115172	protein_coding	principal1	X	1	37581352	833
ENSMUSG00000046897	protein_coding	Zfp740	ENSMUST00000119830	retained_intron		15	1	102208262	3740
ENSMUSG00000024354	protein_coding	Slc23a1	ENSMUST00000237305	nonsense_mediated_decay		18	-1	35627196	1889
ENSMUSG00000026198	protein_coding	Abcb6	ENSMUST00000159219	retained_intron		1	-1	75180286	3625
ENSMUSG00000026198	protein_coding	Abcb6	ENSMUST00000160757	retained_intron		1	-1	75178949	829
ENSMUSG00000024354	protein_coding	Slc23a1	ENSMUST00000235744	processed_transcript		18	-1	35622606	498
ENSMUSG00000026198	protein_coding	Abcb6	ENSMUST00000161103	retained_intron		1	-1	75180376	1966
ENSMUSG00000049422	protein_coding	Chchd10	ENSMUST00000058906	protein_coding	principal1	10	1	75935573	939
ENSMUSG00000029174	protein_coding	Tbc1d1	ENSMUST00000043893	protein_coding	alternative2	5	1	64159451	6471
ENSMUSG00000049553	protein_coding	Polr1a	ENSMUST00000205842	retained_intron		6	1	71909069	1492
ENSMUSG00000031740	protein_coding	Mmp2	ENSMUST00000034187	protein_coding	principal1	8	1	92827291	3078
ENSMUSG00000024354	protein_coding	Slc23a1	ENSMUST00000236196	processed_transcript		18	-1	35627236	565
ENSMUSG00000033009	protein_coding	Ogfod1	ENSMUST00000093301	protein_coding		8	1	94037238	5141
ENSMUSG00000029174	protein_coding	Tbc1d1	ENSMUST00000121370	protein_coding	principal3	5	1	64159820	5419
ENSMUSG00000029461	protein_coding	Fam168a	ENSMUST00000107042	protein_coding	alternative1	7	1	100706635	6388
ENSMUSG00000082558	processed_pseudogene	Snrp1c-ps2	ENSMUST00000120976	processed_pseudogene		13	-1	23924164	365
ENSMUSG00000070960	processed_pseudogene	Gm19680	ENSMUST00000095050	processed_pseudogene		1	1	31615149	1513
ENSMUSG00000049553	protein_coding	Polr1a	ENSMUST00000206753	retained_intron		6	1	71912392	3302
ENSMUSG00000029461	protein_coding	Fam168a	ENSMUST00000208387	retained_intron		7	1	100706684	320
ENSMUSG00000049553	protein_coding	Polr1a	ENSMUST00000205333	retained_intron		6	1	71926094	359
ENSMUSG00000028434	protein_coding	Epb41l4b	ENSMUST00000030142	protein_coding	principal2	4	-1	57143437	3247
ENSMUSG00000029174	protein_coding	Tbc1d1	ENSMUST00000129389	retained_intron		5	1	64160211	1166
ENSMUSG00000026199	protein_coding	Ankzf1	ENSMUST00000151887	retained_intron		1	1	75192151	2259
ENSMUSG00000050799	protein_coding	H2bc1	ENSMUST00000052776	protein_coding	principal1	13	-1	23934156	384
ENSMUSG00000049553	protein_coding	Polr1a	ENSMUST00000206823	retained_intron		6	1	71931181	352
ENSMUSG00000021840	protein_coding	Mapk1ip1l	ENSMUST00000166743	protein_coding	principal1	14	1	47298269	4542
ENSMUSG00000033009	protein_coding	Ogfod1	ENSMUST00000141636	retained_intron		8	1	94037260	671
ENSMUSG00000049553	protein_coding	Polr1a	ENSMUST00000205942	processed_transcript		6	1	71935992	584
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000102810	protein_coding	principal2	2	-1	33087253	3578
ENSMUSG00000026199	protein_coding	Ankzf1	ENSMUST00000134378	retained_intron		1	1	75192160	1093
ENSMUSG00000025793	protein_coding	Hgs	ENSMUST00000140862	protein_coding		11	1	120467635	829
ENSMUSG00000049553	protein_coding	Polr1a	ENSMUST00000206513	nonsense_mediated_decay		6	1	71948360	625
ENSMUSG00000021840	protein_coding	Mapk1ip1l	ENSMUST00000227554	protein_coding		14	1	47298771	584
ENSMUSG00000031740	protein_coding	Mmp2	ENSMUST00000211691	retained_intron		8	1	92840184	1078
ENSMUSG00000029174	protein_coding	Tbc1d1	ENSMUST00000119756	protein_coding	alternative2	5	1	64230399	4760
ENSMUSG00000049553	protein_coding	Polr1a	ENSMUST00000206982	retained_intron		6	1	71948361	554
ENSMUSG00000031740	protein_coding	Mmp2	ENSMUST00000211308	processed_transcript		8	1	92843531	935
ENSMUSG00000060081	protein_coding	H2ac1	ENSMUST00000072391	protein_coding	principal1	13	1	23934462	390
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000049618	protein_coding	alternative2	2	-1	33086366	3678
ENSMUSG00000029461	protein_coding	Fam168a	ENSMUST00000208406	retained_intron		7	1	100706699	707
ENSMUSG00000031740	protein_coding	Mmp2	ENSMUST00000211567	protein_coding		8	1	92843950	674
ENSMUSG00000049553	protein_coding	Polr1a	ENSMUST00000205517	nonsense_mediated_decay		6	1	71961540	4572
ENSMUSG00000029461	protein_coding	Fam168a	ENSMUST00000207564	protein_coding		7	1	100706701	1083
ENSMUSG00000029174	protein_coding	Tbc1d1	ENSMUST00000147348	nonsense_mediated_decay		5	1	64275420	778
ENSMUSG00000109222	processed_pseudogene	Gm10297	ENSMUST00000207136	processed_pseudogene		7	-1	60754013	651
ENSMUSG00000028434	protein_coding	Epb41l4b	ENSMUST00000095076	protein_coding	alternative2	4	-1	57143437	6746
ENSMUSG00000028434	protein_coding	Epb41l4b	ENSMUST00000044022	protein_coding		4	-1	57027676	704
ENSMUSG00000097133	antisense	Gm26628	ENSMUST00000181028	antisense		6	-1	71963775	1719
ENSMUSG00000021840	protein_coding	Mapk1ip1l	ENSMUST00000164235	protein_coding	principal1	14	1	47308550	4531
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000137381	protein_coding	alternative2	2	-1	33131436	3551
ENSMUSG00000108305	processed_pseudogene	Gm19078	ENSMUST00000206311	processed_pseudogene		6	-1	71919844	727
ENSMUSG00000029174	protein_coding	Tbc1d1	ENSMUST00000140960	processed_transcript		5	1	64298530	3083
ENSMUSG00000029174	protein_coding	Tbc1d1	ENSMUST00000101195	protein_coding	principal3	5	1	64160211	5432
ENSMUSG00000082292	processed_pseudogene	Gm12250	ENSMUST00000119467	processed_pseudogene		11	1	58187739	1274
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000127239	retained_intron		16	1	18248679	2805
ENSMUSG00000021840	protein_coding	Mapk1ip1l	ENSMUST00000228058	protein_coding		14	1	47310948	840
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000153717	retained_intron		2	-1	33008328	2127
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000232342	retained_intron		16	1	18248872	1377
ENSMUSG00000029461	protein_coding	Fam168a	ENSMUST00000049053	protein_coding	principal2	7	1	100706702	6609
ENSMUSG00000115082	antisense	Gm49189	ENSMUST00000228200	antisense		14	-1	47305485	525
ENSMUSG00000114977	TEC	Gm9502	ENSMUST00000227190	TEC		14	-1	47298542	1035
ENSMUSG00000029461	protein_coding	Fam168a	ENSMUST00000207078	retained_intron		7	1	100706711	452
ENSMUSG00000029461	protein_coding	Fam168a	ENSMUST00000207875	protein_coding	principal2	7	1	100706720	4077
ENSMUSG00000000811	protein_coding	Txnrd3	ENSMUST00000000828	protein_coding	principal1	6	1	89643988	2836
ENSMUSG00000000811	protein_coding	Txnrd3	ENSMUST00000101171	protein_coding		6	1	89643988	2494
ENSMUSG00000028434	protein_coding	Epb41l4b	ENSMUST00000136337	processed_transcript		4	-1	57138192	611
ENSMUSG00000057177	protein_coding	Gsk3a	ENSMUST00000071739	protein_coding	principal2	7	-1	25237851	2260
ENSMUSG00000034595	protein_coding	Ppp1r18	ENSMUST00000127442	protein_coding	alternative2	17	1	35865593	3524
ENSMUSG00000028434	protein_coding	Epb41l4b	ENSMUST00000133859	processed_transcript		4	-1	57120060	349
ENSMUSG00000029461	protein_coding	Fam168a	ENSMUST00000208013	protein_coding		7	1	100706726	1129
ENSMUSG00000011257	protein_coding	Pabpc4	ENSMUST00000106243	protein_coding	alternative1	4	1	123282825	3111
ENSMUSG00000029461	protein_coding	Fam168a	ENSMUST00000209084	processed_transcript		7	1	100706859	268
ENSMUSG00000029461	protein_coding	Fam168a	ENSMUST00000216021	protein_coding	principal2	7	1	100786375	968
ENSMUSG00000057177	protein_coding	Gsk3a	ENSMUST00000108411	protein_coding	alternative2	7	-1	25237851	2248
ENSMUSG00000028434	protein_coding	Epb41l4b	ENSMUST00000149109	processed_transcript		4	-1	57103453	771
ENSMUSG00000097388	processed_pseudogene	Gm3200	ENSMUST00000181493	processed_pseudogene		7	-1	100761806	1002
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000106988	protein_coding	alternative2	11	1	104282381	2202
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000139778	processed_transcript		2	-1	33105028	3878
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000106989	protein_coding	alternative2	11	1	104282381	2250
ENSMUSG00000022557	protein_coding	Bop1	ENSMUST00000023217	protein_coding	principal1	15	-1	76477277	2491
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000208809	retained_intron		7	1	90386981	3031
ENSMUSG00000057177	protein_coding	Gsk3a	ENSMUST00000206654	retained_intron		7	-1	25231244	1132
ENSMUSG00000028434	protein_coding	Epb41l4b	ENSMUST00000150665	processed_transcript		4	-1	57070559	600
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000207064	retained_intron		7	1	90386989	846
ENSMUSG00000019432	protein_coding	Ddx39b	ENSMUST00000068056	protein_coding	principal1	17	1	35241746	1739
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000193171	nonsense_mediated_decay		2	-1	33034784	694
ENSMUSG00000062078	protein_coding	Qk	ENSMUST00000233645	protein_coding	principal1	17	-1	10319380	8547
ENSMUSG00000026603	protein_coding	Smyd2	ENSMUST00000027897	protein_coding	principal1	1	-1	189922363	1680
ENSMUSG00000022557	protein_coding	Bop1	ENSMUST00000229633	retained_intron		15	-1	76454743	683
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000150242	retained_intron		2	-1	33027194	3819
ENSMUSG00000033009	protein_coding	Ogfod1	ENSMUST00000127634	processed_transcript		8	1	94037263	844
ENSMUSG00000062078	protein_coding	Qk	ENSMUST00000097414	nonsense_mediated_decay		17	-1	10319854	5832
ENSMUSG00000022557	protein_coding	Bop1	ENSMUST00000229897	retained_intron		15	-1	76456028	657
ENSMUSG00000090007	processed_pseudogene	Rpl30-ps2	ENSMUST00000160070	processed_pseudogene		8	-1	22231192	291
ENSMUSG00000033009	protein_coding	Ogfod1	ENSMUST00000060632	protein_coding	alternative2	8	1	94037291	5214
ENSMUSG00000062078	protein_coding	Qk	ENSMUST00000232721	retained_intron		17	-1	10213574	755
ENSMUSG00000022557	protein_coding	Bop1	ENSMUST00000229132	processed_transcript		15	-1	76456273	697
ENSMUSG00000022208	protein_coding	Jph4	ENSMUST00000022819	protein_coding	principal1	14	-1	55116935	4489
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000208580	retained_intron		7	1	90386999	2568
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000135296	processed_transcript		2	-1	33086800	420
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000146353	processed_transcript		11	1	104231579	464
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000208486	retained_intron		7	1	90387014	2673
ENSMUSG00000019432	protein_coding	Ddx39b	ENSMUST00000174757	protein_coding		17	1	35241778	759
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000145227	protein_coding		11	1	104231484	600
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000148043	processed_transcript		2	-1	33086555	438
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000207872	retained_intron		7	1	90387359	1678
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000133135	protein_coding		2	-1	33131650	465
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000106993	protein_coding	alternative2	11	1	104231515	1527
ENSMUSG00000062078	protein_coding	Qk	ENSMUST00000042296	protein_coding		17	-1	10319380	6737
ENSMUSG00000033009	protein_coding	Ogfod1	ENSMUST00000172674	processed_transcript		8	1	94037296	718
ENSMUSG00000022208	protein_coding	Jph4	ENSMUST00000124493	protein_coding	principal1	14	-1	55115552	3200
ENSMUSG00000026603	protein_coding	Smyd2	ENSMUST00000130804	processed_transcript		1	-1	189889002	1077
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000127509	nonsense_mediated_decay		2	-1	33131654	471
ENSMUSG00000033009	protein_coding	Ogfod1	ENSMUST00000145717	retained_intron		8	1	94055059	594
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000209188	retained_intron		7	1	90387372	2266
ENSMUSG00000026603	protein_coding	Smyd2	ENSMUST00000132289	retained_intron		1	-1	189882372	489
ENSMUSG00000019432	protein_coding	Ddx39b	ENSMUST00000174164	retained_intron		17	1	35241805	1711
ENSMUSG00000022208	protein_coding	Jph4	ENSMUST00000132992	retained_intron		14	-1	55110558	659
ENSMUSG00000038860	protein_coding	Garnl3	ENSMUST00000124000	protein_coding		2	-1	33130608	543
ENSMUSG00000019432	protein_coding	Ddx39b	ENSMUST00000173731	protein_coding	principal1	17	1	35241870	2848
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000207928	retained_intron		7	1	90387401	418
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000189194	retained_intron		7	1	90398218	2663
ENSMUSG00000019432	protein_coding	Ddx39b	ENSMUST00000174795	processed_transcript		17	1	35241996	740
ENSMUSG00000022208	protein_coding	Jph4	ENSMUST00000133954	retained_intron		14	-1	55116580	4017
ENSMUSG00000048329	protein_coding	Mfsd6l	ENSMUST00000053211	protein_coding	principal1	11	1	68556186	2060
ENSMUSG00000062078	protein_coding	Qk	ENSMUST00000233828	protein_coding		17	-1	10319361	5428
ENSMUSG00000019432	protein_coding	Ddx39b	ENSMUST00000172549	protein_coding	principal1	17	1	35242667	1770
ENSMUSG00000068536	protein_coding	Doxl2	ENSMUST00000184917	protein_coding	principal1	6	1	48974963	2468
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000100347	protein_coding	principal4	11	1	104231584	1362
ENSMUSG00000062078	protein_coding	Qk	ENSMUST00000233684	protein_coding		17	-1	10282933	650
ENSMUSG00000085937	antisense	Ccdc42os	ENSMUST00000148019	antisense		11	-1	68586957	1335
ENSMUSG00000034595	protein_coding	Ppp1r18	ENSMUST00000144382	protein_coding	principal2	17	1	35865625	2536
ENSMUSG00000026603	protein_coding	Smyd2	ENSMUST00000144452	retained_intron		1	-1	189922253	1708
ENSMUSG00000030616	protein_coding	Sytl2	ENSMUST00000098310	protein_coding		7	1	90380646	4822
ENSMUSG00000114344	processed_pseudogene	Gm17941	ENSMUST00000225584	processed_pseudogene		14	1	63095338	1071
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000138384	retained_intron		11	1	104231479	701
ENSMUSG00000048285	protein_coding	Frmd6	ENSMUST00000057859	protein_coding	principal1	12	1	70825514	4662
ENSMUSG00000029370	protein_coding	Rassf6	ENSMUST00000202784	protein_coding	alternative2	5	-1	90640487	1919
ENSMUSG00000047014	protein_coding	Catsperb	ENSMUST00000221965	processed_transcript		12	1	101404653	576
ENSMUSG00000042572	protein_coding	Ube2q1	ENSMUST00000038356	protein_coding	principal1	3	1	89773616	3077
ENSMUSG00000068536	protein_coding	Doxl2	ENSMUST00000090063	nonsense_mediated_decay		6	1	48975074	2365
ENSMUSG00000047014	protein_coding	Catsperb	ENSMUST00000220474	processed_transcript		12	1	101404663	383
ENSMUSG00000021576	protein_coding	Pdcd6	ENSMUST00000022060	protein_coding	principal2	13	-1	74317321	1131
ENSMUSG00000068536	protein_coding	Doxl2	ENSMUST00000184852	retained_intron		6	1	48977234	982
ENSMUSG00000042572	protein_coding	Ube2q1	ENSMUST00000199427	retained_intron		3	1	89773860	3560
ENSMUSG00000031480	protein_coding	Thsd1	ENSMUST00000069828	protein_coding	principal3	8	1	22227313	4422
ENSMUSG00000110753	processed_pseudogene	Gm18391	ENSMUST00000217189	processed_pseudogene		10	-1	94098140	658
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000144836	processed_transcript		11	1	104318033	779
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000126820	processed_transcript		11	1	104321949	831
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000132245	protein_coding		11	1	104231581	293
ENSMUSG00000034595	protein_coding	Ppp1r18	ENSMUST00000122899	protein_coding	principal2	17	1	35866056	2743
ENSMUSG00000042572	protein_coding	Ube2q1	ENSMUST00000196726	protein_coding		3	1	89774288	1650
ENSMUSG00000018411	protein_coding	Mapt	ENSMUST00000132977	protein_coding		11	1	104231573	418
ENSMUSG00000031480	protein_coding	Thsd1	ENSMUST00000160585	protein_coding		8	1	22227345	3276
ENSMUSG00000021576	protein_coding	Pdcd6	ENSMUST00000222759	protein_coding	alternative1	13	-1	74317580	1376
ENSMUSG00000027091	protein_coding	Zc3h15	ENSMUST00000081591	protein_coding	principal1	2	1	83644435	2111
ENSMUSG00000027076	protein_coding	Timm10	ENSMUST00000028470	protein_coding	principal1	2	1	84826997	690
ENSMUSG00000029370	protein_coding	Rassf6	ENSMUST00000202807	nonsense_mediated_decay		5	-1	90609801	959
ENSMUSG00000021576	protein_coding	Pdcd6	ENSMUST00000222993	retained_intron		13	-1	74305838	625
ENSMUSG00000031480	protein_coding	Thsd1	ENSMUST00000162447	protein_coding	alternative2	8	1	22227362	3273
ENSMUSG00000030592	protein_coding	Ryr1	ENSMUST00000214374	protein_coding	alternative2	7	-1	29125015	15300
ENSMUSG00000021576	protein_coding	Pdcd6	ENSMUST00000220861	retained_intron		13	-1	74317284	1262
ENSMUSG00000011257	protein_coding	Pabpc4	ENSMUST00000106241	protein_coding	alternative1	4	1	123282832	3050
ENSMUSG00000027076	protein_coding	Timm10	ENSMUST00000111631	protein_coding	principal1	2	1	84827384	564
ENSMUSG00000021576	protein_coding	Pdcd6	ENSMUST00000223386	retained_intron		13	-1	74317216	571
ENSMUSG00000029370	protein_coding	Rassf6	ENSMUST00000202704	protein_coding	principal3	5	-1	90640657	1178
ENSMUSG00000109533	processed_pseudogene	Gm7394	ENSMUST00000209138	processed_pseudogene		7	1	60754882	1032
ENSMUSG00000027091	protein_coding	Zc3h15	ENSMUST00000130948	processed_transcript		2	1	83644481	755
ENSMUSG00000031842	protein_coding	Pde4c	ENSMUST00000123739	protein_coding		8	1	70723720	774
ENSMUSG00000048285	protein_coding	Frmd6	ENSMUST00000222802	retained_intron		12	1	70825689	2721
ENSMUSG00000034595	protein_coding	Ppp1r18	ENSMUST00000113814	protein_coding	principal2	17	1	35866660	3131
ENSMUSG00000030592	protein_coding	Ryr1	ENSMUST00000179893	protein_coding	principal2	7	-1	29125151	15358
ENSMUSG00000029370	protein_coding	Rassf6	ENSMUST00000201121	nonsense_mediated_decay		5	-1	90640628	442
ENSMUSG00000109121	lincRNA	Gm44644	ENSMUST00000208825	lincRNA		7	-1	60922903	3133
ENSMUSG00000094076	protein_coding	Gm4767	ENSMUST00000188096	protein_coding	principal1	10	1	81812186	4725
ENSMUSG00000002396	protein_coding	Ocel1	ENSMUST00000002469	protein_coding	principal1	8	1	71371339	1611
ENSMUSG00000094076	protein_coding	Gm4767	ENSMUST00000099439	protein_coding		10	1	81821127	1497
ENSMUSG00000029370	protein_coding	Rassf6	ENSMUST00000201370	protein_coding		5	-1	90640527	326
ENSMUSG00000026199	protein_coding	Ankzf1	ENSMUST00000152233	protein_coding	principal1	1	1	75192160	2739
ENSMUSG00000112740	processed_pseudogene	Gm8264	ENSMUST00000217801	processed_pseudogene		10	-1	81818940	465
ENSMUSG00000048285	protein_coding	Frmd6	ENSMUST00000220515	processed_transcript		12	1	70871525	2191
ENSMUSG00000109121	lincRNA	Gm44644	ENSMUST00000207994	lincRNA		7	-1	60922910	642
ENSMUSG00000073257	protein_coding	Gm10488	ENSMUST00000101657	protein_coding	principal1	X	1	29976314	874
ENSMUSG00000029370	protein_coding	Rassf6	ENSMUST00000201436	processed_transcript		5	-1	90640655	2184
ENSMUSG00000029370	protein_coding	Rassf6	ENSMUST00000031317	protein_coding	principal3	5	-1	90640487	1958
ENSMUSG00000034595	protein_coding	Ppp1r18	ENSMUST00000190496	protein_coding		17	1	35868403	1395
ENSMUSG00000048285	protein_coding	Frmd6	ENSMUST00000222045	retained_intron		12	1	70894823	761
ENSMUSG00000052334	protein_coding	1700024B05Rik	ENSMUST00000064162	protein_coding	principal5	14	1	41943995	1576
ENSMUSG00000082419	processed_pseudogene	Gm11425	ENSMUST00000119608	processed_pseudogene		11	-1	83027997	498
ENSMUSG00000108867	lincRNA	Gm44643	ENSMUST00000208542	lincRNA		7	-1	60961385	674
ENSMUSG00000082159	processed_pseudogene	Gm7910	ENSMUST00000117896	processed_pseudogene		1	1	31736057	835
ENSMUSG00000112697	processed_pseudogene	Gm8137	ENSMUST00000218997	processed_pseudogene		10	-1	81853278	463
ENSMUSG00000027091	protein_coding	Zc3h15	ENSMUST00000134789	processed_transcript		2	1	83660010	1407
ENSMUSG00000052334	protein_coding	1700024B05Rik	ENSMUST00000168972	protein_coding	alternative2	14	1	41943995	1573
ENSMUSG00000027091	protein_coding	Zc3h15	ENSMUST00000142756	processed_transcript		2	1	83644537	386
ENSMUSG00000030592	protein_coding	Ryr1	ENSMUST00000208318	retained_intron		7	-1	29046683	3044
ENSMUSG00000034595	protein_coding	Ppp1r18	ENSMUST00000187690	protein_coding	principal2	17	1	35866615	3185
ENSMUSG00000027091	protein_coding	Zc3h15	ENSMUST00000145099	processed_transcript		2	1	83656620	566
ENSMUSG00000069874	protein_coding	Irgm2	ENSMUST00000209079	protein_coding	alternative2	11	1	58215008	3528
ENSMUSG00000002396	protein_coding	Ocel1	ENSMUST00000110051	protein_coding		8	1	71371298	2179
ENSMUSG00000030592	protein_coding	Ryr1	ENSMUST00000208010	retained_intron		7	-1	29047514	698
ENSMUSG00000027091	protein_coding	Zc3h15	ENSMUST00000125422	processed_transcript		2	1	83644623	578
ENSMUSG00000095044	protein_coding	Gm6401	ENSMUST00000163566	protein_coding	principal5	14	-1	41967927	1404
ENSMUSG00000068151	lincRNA	A230006K03Rik	ENSMUST00000154958	lincRNA		7	-1	61311721	901
ENSMUSG00000110908	processed_pseudogene	Gm48434	ENSMUST00000215473	processed_pseudogene		11	1	83036377	532
ENSMUSG00000027091	protein_coding	Zc3h15	ENSMUST00000140086	processed_transcript		2	1	83657113	657
ENSMUSG00000095044	protein_coding	Gm6401	ENSMUST00000164232	protein_coding	alternative2	14	-1	41967899	618
ENSMUSG00000002396	protein_coding	Ocel1	ENSMUST00000110052	protein_coding		8	1	71371346	5285
ENSMUSG00000030592	protein_coding	Ryr1	ENSMUST00000207764	retained_intron		7	-1	29072077	1028
ENSMUSG00000087443	antisense	Ppp1r18os	ENSMUST00000145804	antisense		17	-1	35866886	784
ENSMUSG00000002396	protein_coding	Ocel1	ENSMUST00000126049	retained_intron		8	1	71372473	368
ENSMUSG00000068151	lincRNA	A230006K03Rik	ENSMUST00000107533	lincRNA		7	-1	61311713	977
ENSMUSG00000108917	TEC	Gm38451	ENSMUST00000208329	TEC		7	-1	61130684	2646
ENSMUSG00000093945	protein_coding	Gm3543	ENSMUST00000111870	protein_coding	principal1	14	-1	41983325	899
ENSMUSG00000102587	IG_V_pseudogene	Ighv1-13	ENSMUST00000195668	IG_V_pseudogene		12	-1	114631111	350
ENSMUSG00000030592	protein_coding	Ryr1	ENSMUST00000207783	retained_intron		7	-1	29125179	2366
ENSMUSG00000069874	protein_coding	Irgm2	ENSMUST00000108836	protein_coding	principal2	11	1	58215028	3459
ENSMUSG00000093945	protein_coding	Gm3543	ENSMUST00000179947	protein_coding		14	-1	41981017	231
ENSMUSG00000052790	unprocessed_pseudogene	Gm9890	ENSMUST00000171867	unprocessed_pseudogene		14	-1	41948671	537
ENSMUSG00000069080	protein_coding	Lcn11	ENSMUST00000091278	protein_coding	principal1	2	1	25777017	652
ENSMUSG00000030592	protein_coding	Ryr1	ENSMUST00000208922	retained_intron		7	-1	29125152	2525
ENSMUSG00000118654	unitary_pseudogene	AC102392.1	ENSMUST00000239422	unitary_pseudogene		3	-1	89786310	87
ENSMUSG00000028607	protein_coding	Cpt2	ENSMUST00000030345	protein_coding	principal1	4	-1	107923610	2372
ENSMUSG00000011257	protein_coding	Pabpc4	ENSMUST00000183940	nonsense_mediated_decay		4	1	123282845	3166
ENSMUSG00000069874	protein_coding	Irgm2	ENSMUST00000058704	protein_coding	principal2	11	1	58199618	3470
ENSMUSG00000030592	protein_coding	Ryr1	ENSMUST00000032813	protein_coding	alternative2	7	-1	29125151	15352
ENSMUSG00000087124	lincRNA	Gm13839	ENSMUST00000151639	lincRNA		5	1	116301300	506
ENSMUSG00000024592	protein_coding	C330018D20Rik	ENSMUST00000025488	protein_coding	principal1	18	-1	56975368	2400
ENSMUSG00000072621	transcribed_unprocessed_pseudogene	Slfn10-ps	ENSMUST00000100716	processed_transcript		11	-1	83040042	3621
ENSMUSG00000028607	protein_coding	Cpt2	ENSMUST00000106720	protein_coding		4	-1	107923560	1015
ENSMUSG00000109017	antisense	Gm38979	ENSMUST00000207099	antisense		7	1	29029023	698
ENSMUSG00000104422	IG_V_pseudogene	Ighv1-14	ENSMUST00000194015	IG_V_pseudogene		12	-1	114647056	402
ENSMUSG00000028607	protein_coding	Cpt2	ENSMUST00000106719	protein_coding		4	-1	107923545	876
ENSMUSG00000028607	protein_coding	Cpt2	ENSMUST00000175651	retained_intron		4	-1	107912766	634
ENSMUSG00000011257	protein_coding	Pabpc4	ENSMUST00000080178	protein_coding	principal4	4	1	123282911	3019
ENSMUSG00000084921	lincRNA	Gm13838	ENSMUST00000132130	lincRNA		5	-1	116309360	531
ENSMUSG00000024592	protein_coding	C330018D20Rik	ENSMUST00000139243	protein_coding	principal1	18	-1	56975354	726
ENSMUSG00000072621	transcribed_unprocessed_pseudogene	Slfn10-ps	ENSMUST00000152760	transcribed_unprocessed_pseudogene		11	-1	83036166	2673
ENSMUSG00000028607	protein_coding	Cpt2	ENSMUST00000141738	processed_transcript		4	-1	107923447	575
ENSMUSG00000028607	protein_coding	Cpt2	ENSMUST00000131644	protein_coding		4	-1	107923588	387
ENSMUSG00000024592	protein_coding	C330018D20Rik	ENSMUST00000152087	processed_transcript		18	-1	56975246	813
ENSMUSG00000112196	processed_pseudogene	Gm8274	ENSMUST00000219820	processed_pseudogene		10	1	81875058	463
ENSMUSG00000112760	processed_pseudogene	Gm47539	ENSMUST00000217659	processed_pseudogene		10	-1	81876667	337
ENSMUSG00000112640	protein_coding	Gm32687	ENSMUST00000220314	protein_coding	principal1	10	1	81863934	2379
ENSMUSG00000011257	protein_coding	Pabpc4	ENSMUST00000078734	protein_coding	alternative1	4	1	123283095	2700
ENSMUSG00000112311	processed_pseudogene	Gm8153	ENSMUST00000219844	processed_pseudogene		10	1	81887013	952
ENSMUSG00000037349	protein_coding	Nudt22	ENSMUST00000041686	protein_coding	principal1	19	-1	6996037	1000
ENSMUSG00000059077	protein_coding	Pth	ENSMUST00000079793	protein_coding	principal1	7	-1	113388570	710
ENSMUSG00000096718	protein_coding	Zfp781	ENSMUST00000219144	protein_coding	principal1	10	-1	81930480	4067
ENSMUSG00000011257	protein_coding	Pabpc4	ENSMUST00000124991	processed_transcript		4	1	123294964	692
ENSMUSG00000059791	protein_coding	Nrm	ENSMUST00000074259	protein_coding	principal2	17	1	35861318	1466
ENSMUSG00000114517	processed_pseudogene	Gm19290	ENSMUST00000226070	processed_pseudogene		14	1	18095724	311
ENSMUSG00000096718	protein_coding	Zfp781	ENSMUST00000076281	protein_coding	principal1	10	-1	81910899	732
ENSMUSG00000037349	protein_coding	Nudt22	ENSMUST00000180765	protein_coding	principal1	19	-1	6996117	1073
ENSMUSG00000011257	protein_coding	Pabpc4	ENSMUST00000146156	retained_intron		4	1	123297180	1146
ENSMUSG00000054266	protein_coding	Serpinb9d	ENSMUST00000067198	protein_coding	principal1	13	1	33192959	1250
ENSMUSG00000110262	processed_pseudogene	Gm45614	ENSMUST00000209994	processed_pseudogene		7	1	113420374	721
ENSMUSG00000098079	processed_pseudogene	Gm6773	ENSMUST00000182377	processed_pseudogene		14	-1	18100060	878
ENSMUSG00000059791	protein_coding	Nrm	ENSMUST00000174873	protein_coding		17	1	35861338	333
ENSMUSG00000082634	processed_pseudogene	Gm12900	ENSMUST00000120919	processed_pseudogene		4	-1	123275472	573
ENSMUSG00000022900	protein_coding	Ildr1	ENSMUST00000023617	protein_coding	alternative2	16	1	36693978	3042
ENSMUSG00000109779	processed_pseudogene	Gm18780	ENSMUST00000209594	processed_pseudogene		7	-1	113448919	574
ENSMUSG00000042797	protein_coding	Aqp11	ENSMUST00000206389	protein_coding	principal1	7	-1	97738289	3737
ENSMUSG00000020212	protein_coding	Mdm1	ENSMUST00000020437	protein_coding	principal3	10	1	118141832	3074
ENSMUSG00000059791	protein_coding	Nrm	ENSMUST00000172931	protein_coding	alternative2	17	1	35861486	302
ENSMUSG00000114678	processed_pseudogene	Gm48481	ENSMUST00000224869	processed_pseudogene		14	1	18189040	515
ENSMUSG00000002393	protein_coding	Nr2f6	ENSMUST00000002466	protein_coding	principal1	8	-1	71381960	2218
ENSMUSG00000022900	protein_coding	Ildr1	ENSMUST00000089618	protein_coding	alternative2	16	1	36693981	2850
ENSMUSG00000037349	protein_coding	Nudt22	ENSMUST00000180762	retained_intron		19	-1	6994884	590
ENSMUSG00000042797	protein_coding	Aqp11	ENSMUST00000084986	protein_coding		7	-1	97737938	896
ENSMUSG00000078853	protein_coding	Igtp	ENSMUST00000035266	protein_coding	principal1	11	1	58199556	2022
ENSMUSG00000085484	protein_coding	Gm13539	ENSMUST00000211245	protein_coding	principal1	2	1	25782257	552
ENSMUSG00000025185	protein_coding	Loxl4	ENSMUST00000026190	protein_coding	principal3	19	-1	42612813	3738
ENSMUSG00000026199	protein_coding	Ankzf1	ENSMUST00000134233	retained_intron		1	1	75192160	3201
ENSMUSG00000042797	protein_coding	Aqp11	ENSMUST00000205784	retained_intron		7	-1	97729388	576
ENSMUSG00000002393	protein_coding	Nr2f6	ENSMUST00000132630	processed_transcript		8	-1	71381906	1372
ENSMUSG00000042797	protein_coding	Aqp11	ENSMUST00000205737	retained_intron		7	-1	97733227	5798
ENSMUSG00000022900	protein_coding	Ildr1	ENSMUST00000153802	retained_intron		16	1	36694033	1922
ENSMUSG00000026199	protein_coding	Ankzf1	ENSMUST00000131788	retained_intron		1	1	75192160	3426
ENSMUSG00000042797	protein_coding	Aqp11	ENSMUST00000205932	processed_transcript		7	-1	97730505	201
ENSMUSG00000026199	protein_coding	Ankzf1	ENSMUST00000145459	nonsense_mediated_decay		1	1	75192160	2770
ENSMUSG00000078853	protein_coding	Igtp	ENSMUST00000094169	protein_coding		11	1	58199586	1767
ENSMUSG00000002393	protein_coding	Nr2f6	ENSMUST00000137734	processed_transcript		8	-1	71375790	235
ENSMUSG00000085484	protein_coding	Gm13539	ENSMUST00000153913	processed_transcript		2	1	25784617	596
ENSMUSG00000085099	processed_pseudogene	Gm16288	ENSMUST00000137940	processed_pseudogene		5	-1	30240448	367
ENSMUSG00000002393	protein_coding	Nr2f6	ENSMUST00000156270	processed_transcript		8	-1	71375790	427
ENSMUSG00000078853	protein_coding	Igtp	ENSMUST00000168280	protein_coding		11	1	58199588	1832
ENSMUSG00000086715	lincRNA	B230112J18Rik	ENSMUST00000128473	lincRNA		5	1	116312360	602
ENSMUSG00000002393	protein_coding	Nr2f6	ENSMUST00000155463	processed_transcript		8	-1	71375790	390
ENSMUSG00000090073	processed_transcript	Gm13538	ENSMUST00000143166	processed_transcript		2	-1	25794650	548
ENSMUSG00000026199	protein_coding	Ankzf1	ENSMUST00000127860	retained_intron		1	1	75195693	832
ENSMUSG00000002393	protein_coding	Nr2f6	ENSMUST00000137058	protein_coding		8	-1	71381177	810
ENSMUSG00000103254	IG_V_gene	Ighv1-15	ENSMUST00000192077	IG_V_gene	principal1	12	-1	114657786	351
ENSMUSG00000002393	protein_coding	Nr2f6	ENSMUST00000124732	protein_coding		8	-1	71381090	761
ENSMUSG00000106766	TEC	4933424N20Rik	ENSMUST00000200749	TEC		5	-1	116381635	1463
ENSMUSG00000026199	protein_coding	Ankzf1	ENSMUST00000127625	protein_coding		1	1	75192192	1167
ENSMUSG00000022900	protein_coding	Ildr1	ENSMUST00000119464	protein_coding	principal3	16	1	36694038	2878
ENSMUSG00000002393	protein_coding	Nr2f6	ENSMUST00000127443	processed_transcript		8	-1	71380909	718
ENSMUSG00000025185	protein_coding	Loxl4	ENSMUST00000164786	protein_coding	alternative2	19	-1	42612813	2617
ENSMUSG00000010592	protein_coding	Dazl	ENSMUST00000233248	protein_coding		17	-1	50292892	2820
ENSMUSG00000113664	processed_pseudogene	Gm47184	ENSMUST00000221402	processed_pseudogene		12	1	83505082	498
ENSMUSG00000086945	lincRNA	4930562A09Rik	ENSMUST00000153818	lincRNA		5	-1	116392800	734
ENSMUSG00000079105	protein_coding	C7	ENSMUST00000110689	protein_coding	principal1	15	-1	5063740	2676
ENSMUSG00000095554	IG_V_gene	Ighv1-16	ENSMUST00000103501	IG_V_gene	principal1	12	-1	114666165	294
ENSMUSG00000022900	protein_coding	Ildr1	ENSMUST00000128084	retained_intron		16	1	36715538	823
ENSMUSG00000025185	protein_coding	Loxl4	ENSMUST00000164014	processed_transcript		19	-1	42603321	675
ENSMUSG00000081301	processed_pseudogene	Gm15951	ENSMUST00000118377	processed_pseudogene		4	-1	147520867	400
ENSMUSG00000102773	IG_V_pseudogene	Ighv1-17-1	ENSMUST00000194849	IG_V_pseudogene		12	-1	114672401	351
ENSMUSG00000096993	antisense	Gm26787	ENSMUST00000180474	antisense		9	1	36767887	608
ENSMUSG00000096440	unprocessed_pseudogene	Vmn2r-ps20	ENSMUST00000179853	unprocessed_pseudogene		4	1	147521531	382
ENSMUSG00000025185	protein_coding	Loxl4	ENSMUST00000166128	protein_coding		19	-1	42612772	570
ENSMUSG00000085450	antisense	Gm13686	ENSMUST00000122851	antisense		2	-1	83701116	350
ENSMUSG00000117164	processed_pseudogene	Gm49951	ENSMUST00000232725	processed_pseudogene		17	-1	22332994	1139
ENSMUSG00000112205	unprocessed_pseudogene	Gm47546	ENSMUST00000219257	unprocessed_pseudogene		10	1	81963798	330
ENSMUSG00000036401	protein_coding	Glt6d1	ENSMUST00000038010	protein_coding	principal1	2	-1	25815848	1211
ENSMUSG00000020212	protein_coding	Mdm1	ENSMUST00000163238	protein_coding	alternative2	10	1	118141859	2461
ENSMUSG00000103790	IG_V_pseudogene	Ighv1-17	ENSMUST00000194435	IG_V_pseudogene		12	-1	114677181	350
ENSMUSG00000019804	protein_coding	Snx3	ENSMUST00000019939	protein_coding	principal1	10	1	42502031	1401
ENSMUSG00000024998	protein_coding	Plce1	ENSMUST00000181994	processed_transcript		19	1	38481109	473
ENSMUSG00000112051	processed_pseudogene	Gm8158	ENSMUST00000219220	processed_pseudogene		10	-1	81986402	465
ENSMUSG00000025185	protein_coding	Loxl4	ENSMUST00000171432	protein_coding	principal3	19	-1	42608531	2274
ENSMUSG00000082599	processed_pseudogene	Gm13141	ENSMUST00000117417	processed_pseudogene		4	-1	147528174	456
ENSMUSG00000038495	protein_coding	Otud7b	ENSMUST00000132980	protein_coding		3	1	96104527	777
ENSMUSG00000019804	protein_coding	Snx3	ENSMUST00000105500	protein_coding		10	1	42502030	753
ENSMUSG00000019804	protein_coding	Snx3	ENSMUST00000105499	protein_coding		10	1	42502290	1057
ENSMUSG00000020212	protein_coding	Mdm1	ENSMUST00000219087	protein_coding		10	1	118141914	1318
ENSMUSG00000010592	protein_coding	Dazl	ENSMUST00000010736	protein_coding	principal1	17	-1	50293636	2976
ENSMUSG00000036401	protein_coding	Glt6d1	ENSMUST00000130316	processed_transcript		2	-1	25815831	448
ENSMUSG00000020212	protein_coding	Mdm1	ENSMUST00000218011	retained_intron		10	1	118141924	690
ENSMUSG00000010592	protein_coding	Dazl	ENSMUST00000233756	retained_intron		17	-1	50283323	457
ENSMUSG00000081237	unprocessed_pseudogene	Gm11385	ENSMUST00000121513	unprocessed_pseudogene		13	-1	33218151	570
ENSMUSG00000010592	protein_coding	Dazl	ENSMUST00000232796	protein_coding		17	-1	50287581	600
ENSMUSG00000020212	protein_coding	Mdm1	ENSMUST00000164077	protein_coding	alternative2	10	1	118141924	2922
ENSMUSG00000033834	protein_coding	Tpbpa	ENSMUST00000021885	protein_coding	principal2	13	-1	60941984	1621
ENSMUSG00000010592	protein_coding	Dazl	ENSMUST00000233620	retained_intron		17	-1	50284442	512
ENSMUSG00000038495	protein_coding	Otud7b	ENSMUST00000138206	protein_coding		3	1	96104527	946
ENSMUSG00000033834	protein_coding	Tpbpa	ENSMUST00000225275	protein_coding	alternative2	13	-1	60941917	642
ENSMUSG00000010592	protein_coding	Dazl	ENSMUST00000232875	retained_intron		17	-1	50293599	1342
ENSMUSG00000000282	protein_coding	Mnt	ENSMUST00000000291	protein_coding	principal1	11	1	74830920	4590
ENSMUSG00000033834	protein_coding	Tpbpa	ENSMUST00000225936	nonsense_mediated_decay		13	-1	60940893	849
ENSMUSG00000027376	protein_coding	Prom2	ENSMUST00000028855	protein_coding	principal3	2	-1	127541467	4796
ENSMUSG00000020212	protein_coding	Mdm1	ENSMUST00000169817	protein_coding	alternative2	10	1	118141945	2022
ENSMUSG00000000282	protein_coding	Mnt	ENSMUST00000133217	retained_intron		11	1	74836326	777
ENSMUSG00000041548	protein_coding	Hspb8	ENSMUST00000036991	protein_coding	principal1	5	-1	116422864	1816
ENSMUSG00000091997	processed_pseudogene	Gm6611	ENSMUST00000163830	processed_pseudogene		16	1	32923218	1272
ENSMUSG00000000282	protein_coding	Mnt	ENSMUST00000132150	protein_coding		11	1	74837468	622
ENSMUSG00000045915	protein_coding	Ccdc42	ENSMUST00000154294	protein_coding	principal1	11	1	68587021	1384
ENSMUSG00000020212	protein_coding	Mdm1	ENSMUST00000219605	processed_transcript		10	1	118146665	765
ENSMUSG00000041548	protein_coding	Hspb8	ENSMUST00000133335	processed_transcript		5	-1	116415892	749
ENSMUSG00000045915	protein_coding	Ccdc42	ENSMUST00000063006	protein_coding		11	1	68587133	1029
ENSMUSG00000019710	protein_coding	Mrpl24	ENSMUST00000119968	protein_coding	principal1	3	1	87919506	1339
ENSMUSG00000020212	protein_coding	Mdm1	ENSMUST00000218400	retained_intron		10	1	118151995	814
ENSMUSG00000020021	protein_coding	Fgd6	ENSMUST00000020208	protein_coding	principal1	10	1	94036001	8044
ENSMUSG00000045915	protein_coding	Ccdc42	ENSMUST00000102612	protein_coding		11	1	68594055	785
ENSMUSG00000076695	IG_V_gene	Ighv1-18	ENSMUST00000194350	IG_V_gene	principal5	12	-1	114683065	351
ENSMUSG00000020212	protein_coding	Mdm1	ENSMUST00000217767	retained_intron		10	1	118157012	526
ENSMUSG00000076695	IG_V_gene	Ighv1-18	ENSMUST00000103504	IG_V_gene	alternative2	12	-1	114683065	306
ENSMUSG00000070504	protein_coding	Fcrl6	ENSMUST00000094303	protein_coding	principal1	1	-1	172602551	1912
ENSMUSG00000027376	protein_coding	Prom2	ENSMUST00000103214	protein_coding	alternative2	2	-1	127541385	4190
ENSMUSG00000112684	antisense	Gm47958	ENSMUST00000219046	antisense		10	-1	118165162	541
ENSMUSG00000102806	IG_V_pseudogene	Ighv1-19-1	ENSMUST00000192823	IG_V_pseudogene		12	-1	114704580	351
ENSMUSG00000020021	protein_coding	Fgd6	ENSMUST00000141143	processed_transcript		10	1	94072542	296
ENSMUSG00000020021	protein_coding	Fgd6	ENSMUST00000125535	retained_intron		10	1	94133163	610
ENSMUSG00000027376	protein_coding	Prom2	ENSMUST00000140156	processed_transcript		2	-1	127535197	295
ENSMUSG00000111539	TEC	Gm48372	ENSMUST00000214721	TEC		10	1	94108739	2415
ENSMUSG00000027376	protein_coding	Prom2	ENSMUST00000155581	retained_intron		2	-1	127541414	661
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000133929	processed_transcript		13	1	108449948	1530
ENSMUSG00000070504	protein_coding	Fcrl6	ENSMUST00000193566	retained_intron		1	-1	172602547	1460
ENSMUSG00000083648	processed_pseudogene	Gm14229	ENSMUST00000121178	processed_pseudogene		2	-1	127569426	850
ENSMUSG00000075703	protein_coding	Selenoi	ENSMUST00000145167	protein_coding	principal1	5	1	30232581	6803
ENSMUSG00000070504	protein_coding	Fcrl6	ENSMUST00000193431	retained_intron		1	-1	172602551	1321
ENSMUSG00000025793	protein_coding	Hgs	ENSMUST00000106205	protein_coding	alternative2	11	1	120467635	2900
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000151111	processed_transcript		13	1	108450009	481
ENSMUSG00000025184	protein_coding	R3hcc1l	ENSMUST00000026188	protein_coding	principal2	19	1	42518759	4112
ENSMUSG00000025184	protein_coding	R3hcc1l	ENSMUST00000160107	protein_coding	alternative2	19	1	42518798	950
ENSMUSG00000019710	protein_coding	Mrpl24	ENSMUST00000019854	protein_coding	principal1	3	1	87919506	1226
ENSMUSG00000075703	protein_coding	Selenoi	ENSMUST00000198788	retained_intron		5	1	30232635	2039
ENSMUSG00000025793	protein_coding	Hgs	ENSMUST00000106203	protein_coding	principal2	11	1	120467635	2903
ENSMUSG00000025184	protein_coding	R3hcc1l	ENSMUST00000160893	protein_coding		19	1	42518822	635
ENSMUSG00000107021	TEC	Gm42853	ENSMUST00000201273	TEC		5	-1	116457484	1387
ENSMUSG00000047014	protein_coding	Catsperb	ENSMUST00000055156	protein_coding	principal1	12	1	101404673	3716
ENSMUSG00000006056	protein_coding	Calcoco2	ENSMUST00000068686	protein_coding	principal2	11	-1	96111964	1621
ENSMUSG00000025184	protein_coding	R3hcc1l	ENSMUST00000161422	retained_intron		19	1	42564241	741
ENSMUSG00000025793	protein_coding	Hgs	ENSMUST00000135231	protein_coding		11	1	120477515	882
ENSMUSG00000075703	protein_coding	Selenoi	ENSMUST00000151468	retained_intron		5	1	30232640	3790
ENSMUSG00000019710	protein_coding	Mrpl24	ENSMUST00000137775	protein_coding		3	1	87919536	432
ENSMUSG00000107172	TEC	4933430H06Rik	ENSMUST00000200924	TEC		5	-1	116502716	1343
ENSMUSG00000025184	protein_coding	R3hcc1l	ENSMUST00000162238	retained_intron		19	1	42581161	3129
ENSMUSG00000026544	protein_coding	Dusp23	ENSMUST00000027826	protein_coding	principal1	1	-1	172632962	1410
ENSMUSG00000019710	protein_coding	Mrpl24	ENSMUST00000152287	retained_intron		3	1	87919557	815
ENSMUSG00000024067	protein_coding	Dpy30	ENSMUST00000233581	protein_coding	principal1	17	-1	74316463	734
ENSMUSG00000019710	protein_coding	Mrpl24	ENSMUST00000121920	protein_coding	principal1	3	1	87919563	1115
ENSMUSG00000047014	protein_coding	Catsperb	ENSMUST00000221241	nonsense_mediated_decay		12	1	101404752	3337
ENSMUSG00000035578	protein_coding	Iqcg	ENSMUST00000115100	protein_coding	principal1	16	-1	33056190	5618
ENSMUSG00000075703	protein_coding	Selenoi	ENSMUST00000138001	retained_intron		5	1	30232647	1511
ENSMUSG00000024067	protein_coding	Dpy30	ENSMUST00000232687	protein_coding	principal1	17	-1	74316203	694
ENSMUSG00000060128	processed_pseudogene	Gm2710	ENSMUST00000073196	processed_pseudogene		1	-1	172669636	603
ENSMUSG00000047014	protein_coding	Catsperb	ENSMUST00000220820	nonsense_mediated_decay		12	1	101515125	2160
ENSMUSG00000063919	protein_coding	Srrm4	ENSMUST00000150127	retained_intron		5	-1	116453913	6555
ENSMUSG00000090117	antisense	Gm16541	ENSMUST00000160992	antisense		19	-1	42563108	614
ENSMUSG00000006056	protein_coding	Calcoco2	ENSMUST00000097162	protein_coding	alternative2	11	-1	96111962	968
ENSMUSG00000019710	protein_coding	Mrpl24	ENSMUST00000121048	protein_coding	principal1	3	1	87921609	1234
ENSMUSG00000075703	protein_coding	Selenoi	ENSMUST00000145858	nonsense_mediated_decay		5	1	30232650	638
ENSMUSG00000024067	protein_coding	Dpy30	ENSMUST00000233187	protein_coding		17	-1	74316394	512
ENSMUSG00000090117	antisense	Gm16541	ENSMUST00000162651	antisense		19	-1	42563095	420
ENSMUSG00000035578	protein_coding	Iqcg	ENSMUST00000231235	processed_transcript		16	-1	33049870	1252
ENSMUSG00000115250	TEC	Gm49020	ENSMUST00000228398	TEC		14	1	55127317	1075
ENSMUSG00000035578	protein_coding	Iqcg	ENSMUST00000133219	processed_transcript		16	-1	33023937	442
ENSMUSG00000115077	unprocessed_pseudogene	Gm46455	ENSMUST00000228176	unprocessed_pseudogene		14	1	55169709	375
ENSMUSG00000090117	antisense	Gm16541	ENSMUST00000162829	antisense		19	-1	42563108	435
ENSMUSG00000035578	protein_coding	Iqcg	ENSMUST00000040309	processed_transcript		16	-1	33056218	786
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000151218	protein_coding		11	1	54100095	605
ENSMUSG00000117222	lincRNA	Gm49906	ENSMUST00000233175	lincRNA		17	1	50339252	466
ENSMUSG00000035578	protein_coding	Iqcg	ENSMUST00000126793	retained_intron		16	-1	33056185	713
ENSMUSG00000024067	protein_coding	Dpy30	ENSMUST00000164832	protein_coding	principal1	17	-1	74323944	789
ENSMUSG00000018899	protein_coding	Irf1	ENSMUST00000108920	protein_coding	principal3	11	1	53770014	2137
ENSMUSG00000102430	processed_pseudogene	Gm38051	ENSMUST00000193740	processed_pseudogene		1	1	172781445	433
ENSMUSG00000018899	protein_coding	Irf1	ENSMUST00000140866	protein_coding		11	1	53770048	833
ENSMUSG00000075703	protein_coding	Selenoi	ENSMUST00000132404	nonsense_mediated_decay		5	1	30232674	3122
ENSMUSG00000075703	protein_coding	Selenoi	ENSMUST00000197299	retained_intron		5	1	30263064	516
ENSMUSG00000075703	protein_coding	Selenoi	ENSMUST00000151795	processed_transcript		5	1	30263544	1028
ENSMUSG00000018899	protein_coding	Irf1	ENSMUST00000108922	protein_coding	alternative2	11	1	53770051	2092
ENSMUSG00000033972	protein_coding	Zfp944	ENSMUST00000115535	protein_coding	principal1	17	-1	22361400	2784
ENSMUSG00000024067	protein_coding	Dpy30	ENSMUST00000112571	protein_coding	principal1	17	-1	74316408	622
ENSMUSG00000037942	protein_coding	Crp	ENSMUST00000038495	protein_coding	principal1	1	1	172698055	1695
ENSMUSG00000048039	protein_coding	Isg20l2	ENSMUST00000055984	protein_coding	principal1	3	1	87930314	2893
ENSMUSG00000037942	protein_coding	Crp	ENSMUST00000194251	processed_transcript		1	1	172698056	1894
ENSMUSG00000024067	protein_coding	Dpy30	ENSMUST00000233059	protein_coding		17	-1	74316301	339
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000182569	retained_intron		5	-1	100378913	1686
ENSMUSG00000038495	protein_coding	Otud7b	ENSMUST00000090785	protein_coding	principal1	3	1	96104527	8101
ENSMUSG00000033192	protein_coding	Lpcat2	ENSMUST00000046290	protein_coding	principal1	8	1	92855339	2811
ENSMUSG00000018899	protein_coding	Irf1	ENSMUST00000128336	processed_transcript		11	1	53770071	943
ENSMUSG00000038495	protein_coding	Otud7b	ENSMUST00000196172	processed_transcript		3	1	96104546	880
ENSMUSG00000028331	protein_coding	Trmo	ENSMUST00000151903	nonsense_mediated_decay		4	-1	46389418	2127
ENSMUSG00000038495	protein_coding	Otud7b	ENSMUST00000146660	processed_transcript		3	1	96104548	503
ENSMUSG00000018899	protein_coding	Irf1	ENSMUST00000142221	nonsense_mediated_decay		11	1	53770105	517
ENSMUSG00000038495	protein_coding	Otud7b	ENSMUST00000098849	protein_coding	principal1	3	1	96107087	8046
ENSMUSG00000018899	protein_coding	Irf1	ENSMUST00000138913	protein_coding		11	1	53770477	525
ENSMUSG00000018899	protein_coding	Irf1	ENSMUST00000123376	protein_coding		11	1	53770487	823
ENSMUSG00000033192	protein_coding	Lpcat2	ENSMUST00000210099	protein_coding		8	1	92855395	2179
ENSMUSG00000006445	protein_coding	Epha2	ENSMUST00000006614	protein_coding	principal1	4	1	141301240	3913
ENSMUSG00000036850	protein_coding	Mrpl41	ENSMUST00000045604	protein_coding	principal1	2	-1	24975098	776
ENSMUSG00000038495	protein_coding	Otud7b	ENSMUST00000135263	processed_transcript		3	1	96150704	600
ENSMUSG00000044501	protein_coding	Zfp758	ENSMUST00000149699	protein_coding	alternative2	17	1	22361453	2876
ENSMUSG00000038495	protein_coding	Otud7b	ENSMUST00000035519	protein_coding	principal1	3	1	96104527	8043
ENSMUSG00000063919	protein_coding	Srrm4	ENSMUST00000076124	protein_coding	principal1	5	-1	116591817	7472
ENSMUSG00000018899	protein_coding	Irf1	ENSMUST00000019043	protein_coding	principal3	11	1	53770495	2069
ENSMUSG00000036850	protein_coding	Mrpl41	ENSMUST00000194392	protein_coding		2	-1	24974989	401
ENSMUSG00000050373	protein_coding	Snx21	ENSMUST00000174070	protein_coding		2	1	164785823	1446
ENSMUSG00000006445	protein_coding	Epha2	ENSMUST00000131026	processed_transcript		4	1	141302407	507
ENSMUSG00000020734	protein_coding	Grin2c	ENSMUST00000003351	protein_coding	principal1	11	-1	115265429	4279
ENSMUSG00000085060	lincRNA	E330016L19Rik	ENSMUST00000140614	lincRNA		X	1	30037837	1959
ENSMUSG00000028331	protein_coding	Trmo	ENSMUST00000086563	protein_coding	principal3	4	-1	46389423	1554
ENSMUSG00000006445	protein_coding	Epha2	ENSMUST00000145523	processed_transcript		4	1	141308894	531
ENSMUSG00000018899	protein_coding	Irf1	ENSMUST00000133291	protein_coding		11	1	53770509	515
ENSMUSG00000038910	protein_coding	Plcl2	ENSMUST00000043938	protein_coding	principal1	17	1	50509403	4185
ENSMUSG00000033192	protein_coding	Lpcat2	ENSMUST00000209265	nonsense_mediated_decay		8	1	92855395	2238
ENSMUSG00000063919	protein_coding	Srrm4	ENSMUST00000139425	protein_coding		5	-1	116446844	2798
ENSMUSG00000063919	protein_coding	Srrm4	ENSMUST00000222119	nonsense_mediated_decay		5	-1	116467588	682
ENSMUSG00000043259	protein_coding	Fam13c	ENSMUST00000218542	retained_intron		10	1	70440481	2585
ENSMUSG00000018899	protein_coding	Irf1	ENSMUST00000153054	retained_intron		11	1	53773153	799
ENSMUSG00000006445	protein_coding	Epha2	ENSMUST00000149002	processed_transcript		4	1	141316913	969
ENSMUSG00000063919	protein_coding	Srrm4	ENSMUST00000201430	retained_intron		5	-1	116477068	779
ENSMUSG00000044501	protein_coding	Zfp758	ENSMUST00000072477	protein_coding		17	1	22361455	1947
ENSMUSG00000020734	protein_coding	Grin2c	ENSMUST00000106554	protein_coding	principal1	11	-1	115267243	4895
ENSMUSG00000033192	protein_coding	Lpcat2	ENSMUST00000130471	retained_intron		8	1	92855480	697
ENSMUSG00000091191	TEC	Gm17334	ENSMUST00000238260	TEC		11	-1	53773195	3145
ENSMUSG00000038910	protein_coding	Plcl2	ENSMUST00000233823	processed_transcript		17	1	50606994	4433
ENSMUSG00000091191	TEC	Gm17334	ENSMUST00000170390	TEC		11	-1	53773187	907
ENSMUSG00000050373	protein_coding	Snx21	ENSMUST00000172577	protein_coding		2	1	164785991	1825
ENSMUSG00000033192	protein_coding	Lpcat2	ENSMUST00000151106	processed_transcript		8	1	92905918	653
ENSMUSG00000044501	protein_coding	Zfp758	ENSMUST00000121315	protein_coding	principal3	17	1	22361522	2860
ENSMUSG00000102701	TEC	9430083B18Rik	ENSMUST00000191908	TEC		1	1	172873551	863
ENSMUSG00000109669	antisense	Gm45472	ENSMUST00000211295	antisense		8	-1	92856334	1426
ENSMUSG00000028331	protein_coding	Trmo	ENSMUST00000030015	protein_coding	alternative2	4	-1	46389437	1527
ENSMUSG00000113703	processed_pseudogene	Gm47788	ENSMUST00000221642	processed_pseudogene		13	1	33237702	604
ENSMUSG00000078144	protein_coding	Capns2	ENSMUST00000104947	protein_coding	principal1	8	1	92901407	1005
ENSMUSG00000011148	protein_coding	Adssl1	ENSMUST00000021726	protein_coding	principal1	12	1	112620045	1777
ENSMUSG00000044501	protein_coding	Zfp758	ENSMUST00000088765	protein_coding	principal3	17	1	22361453	2973
ENSMUSG00000050373	protein_coding	Snx21	ENSMUST00000056181	protein_coding	principal1	2	1	164785991	2590
ENSMUSG00000036315	protein_coding	Znrd1	ENSMUST00000113669	protein_coding	principal1	17	-1	36958482	742
ENSMUSG00000094430	protein_coding	Smbd1	ENSMUST00000179384	protein_coding	principal1	16	-1	32810477	679
ENSMUSG00000026542	protein_coding	Apcs	ENSMUST00000027824	protein_coding	principal1	1	-1	172895041	971
ENSMUSG00000052914	protein_coding	Cyp2j6	ENSMUST00000030303	protein_coding	principal1	4	-1	96553661	3605
ENSMUSG00000011148	protein_coding	Adssl1	ENSMUST00000223044	retained_intron		12	1	112620077	506
ENSMUSG00000086219	antisense	Srrm4os	ENSMUST00000133548	antisense		5	1	116438720	562
ENSMUSG00000050373	protein_coding	Snx21	ENSMUST00000152471	protein_coding		2	1	164786017	1243
ENSMUSG00000097256	antisense	Gm26769	ENSMUST00000180469	antisense		16	1	32807483	619
ENSMUSG00000043259	protein_coding	Fam13c	ENSMUST00000220442	retained_intron		10	1	70440706	2720
ENSMUSG00000050373	protein_coding	Snx21	ENSMUST00000140519	protein_coding		2	1	164786794	383
ENSMUSG00000044645	processed_pseudogene	Gm7334	ENSMUST00000061681	processed_pseudogene		17	1	50698688	756
ENSMUSG00000114390	lincRNA	1700062C10Rik	ENSMUST00000223923	lincRNA		14	-1	16037197	1585
ENSMUSG00000086219	antisense	Srrm4os	ENSMUST00000126959	antisense		5	1	116438720	3360
ENSMUSG00000114390	lincRNA	1700062C10Rik	ENSMUST00000223892	lincRNA		14	-1	16037269	486
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000160648	nonsense_mediated_decay		3	-1	87930127	3157
ENSMUSG00000050373	protein_coding	Snx21	ENSMUST00000173945	retained_intron		2	1	164790411	3262
ENSMUSG00000073528	processed_transcript	Gm10530	ENSMUST00000097514	sense_intronic		1	1	159614749	1169
ENSMUSG00000050373	protein_coding	Snx21	ENSMUST00000174342	processed_transcript		2	1	164791652	1604
ENSMUSG00000023025	protein_coding	Larp4	ENSMUST00000057632	protein_coding	alternative2	15	1	99970065	4196
ENSMUSG00000114390	lincRNA	1700062C10Rik	ENSMUST00000223757	lincRNA		14	-1	16037271	396
ENSMUSG00000043259	protein_coding	Fam13c	ENSMUST00000219514	retained_intron		10	1	70440832	4820
ENSMUSG00000073528	processed_transcript	Gm10530	ENSMUST00000194909	lincRNA		1	1	159681662	893
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000159091	retained_intron		3	-1	87930127	3197
ENSMUSG00000039236	protein_coding	Isg20	ENSMUST00000118867	protein_coding	principal1	7	1	78913424	697
ENSMUSG00000106914	sense_intronic	Gm42854	ENSMUST00000201262	sense_intronic		5	-1	116573495	722
ENSMUSG00000011148	protein_coding	Adssl1	ENSMUST00000180015	protein_coding		12	1	112620093	1819
ENSMUSG00000114484	processed_pseudogene	Gm8517	ENSMUST00000225492	processed_pseudogene		14	1	16171397	1212
ENSMUSG00000017307	protein_coding	Acot8	ENSMUST00000134611	nonsense_mediated_decay		2	-1	164804881	1017
ENSMUSG00000039236	protein_coding	Isg20	ENSMUST00000121645	protein_coding		7	1	78913458	1087
ENSMUSG00000036315	protein_coding	Znrd1	ENSMUST00000172518	protein_coding	principal1	17	-1	36958533	710
ENSMUSG00000031842	protein_coding	Pde4c	ENSMUST00000034307	protein_coding		8	1	70724064	3203
ENSMUSG00000017307	protein_coding	Acot8	ENSMUST00000133053	retained_intron		2	-1	164796489	1276
ENSMUSG00000114698	processed_pseudogene	Rpl31-ps3	ENSMUST00000225096	processed_pseudogene		14	1	16225023	348
ENSMUSG00000011148	protein_coding	Adssl1	ENSMUST00000221720	processed_transcript		12	1	112639372	562
ENSMUSG00000031842	protein_coding	Pde4c	ENSMUST00000239487	protein_coding		8	1	70724064	3203
ENSMUSG00000036315	protein_coding	Znrd1	ENSMUST00000172823	protein_coding		17	-1	36958318	454
ENSMUSG00000031842	protein_coding	Pde4c	ENSMUST00000239435	protein_coding		8	1	70724064	3380
ENSMUSG00000022209	protein_coding	Dhrs2	ENSMUST00000022820	protein_coding	principal1	14	1	55222007	1268
ENSMUSG00000036315	protein_coding	Znrd1	ENSMUST00000174466	processed_transcript		17	-1	36958559	584
ENSMUSG00000022209	protein_coding	Dhrs2	ENSMUST00000165432	protein_coding	principal1	14	1	55234654	849
ENSMUSG00000023025	protein_coding	Larp4	ENSMUST00000100206	protein_coding	principal3	15	1	99972780	6530
ENSMUSG00000039236	protein_coding	Isg20	ENSMUST00000038142	protein_coding	principal1	7	1	78913765	1083
ENSMUSG00000031842	protein_coding	Pde4c	ENSMUST00000110095	protein_coding	principal2	8	1	70724065	3290
ENSMUSG00000023025	protein_coding	Larp4	ENSMUST00000230956	protein_coding	alternative2	15	1	99972836	2192
ENSMUSG00000037924	protein_coding	Olfr16	ENSMUST00000215254	protein_coding	principal1	1	1	172950409	2690
ENSMUSG00000031842	protein_coding	Pde4c	ENSMUST00000224874	protein_coding	alternative2	8	1	70743032	3099
ENSMUSG00000039236	protein_coding	Isg20	ENSMUST00000133042	retained_intron		7	1	78913981	801
ENSMUSG00000037924	protein_coding	Olfr16	ENSMUST00000038432	protein_coding	principal1	1	1	172956768	1050
ENSMUSG00000030495	protein_coding	Slc7a10	ENSMUST00000135452	protein_coding		7	1	35186385	629
ENSMUSG00000029545	protein_coding	Acads	ENSMUST00000131726	retained_intron		5	-1	115119287	2023
ENSMUSG00000115683	processed_pseudogene	Gm49021	ENSMUST00000228056	processed_pseudogene		14	-1	55246059	454
ENSMUSG00000024782	protein_coding	Ak3	ENSMUST00000025696	protein_coding	principal1	19	-1	29047961	2809
ENSMUSG00000023025	protein_coding	Larp4	ENSMUST00000229553	retained_intron		15	1	99972837	1420
ENSMUSG00000114987	lincRNA	Gm49022	ENSMUST00000227782	lincRNA		14	-1	55280687	446
ENSMUSG00000023025	protein_coding	Larp4	ENSMUST00000229891	retained_intron		15	1	99972869	4207
ENSMUSG00000024782	protein_coding	Ak3	ENSMUST00000125587	protein_coding		19	-1	29027244	504
ENSMUSG00000031842	protein_coding	Pde4c	ENSMUST00000149272	retained_intron		8	1	70743079	3452
ENSMUSG00000006395	polymorphic_pseudogene	Hyi	ENSMUST00000194248	polymorphic_pseudogene		4	1	118359990	936
ENSMUSG00000115125	processed_pseudogene	Gm6852	ENSMUST00000227916	processed_pseudogene		14	-1	55350690	907
ENSMUSG00000006395	polymorphic_pseudogene	Hyi	ENSMUST00000179719	retained_intron		4	1	118359999	1296
ENSMUSG00000031842	protein_coding	Pde4c	ENSMUST00000128685	retained_intron		8	1	70747891	2489
ENSMUSG00000023025	protein_coding	Larp4	ENSMUST00000231160	protein_coding	alternative2	15	1	99972918	3935
ENSMUSG00000106730	unprocessed_pseudogene	Gm42472	ENSMUST00000201626	unprocessed_pseudogene		1	-1	173053690	859
ENSMUSG00000107139	unprocessed_pseudogene	Gm42475	ENSMUST00000201212	unprocessed_pseudogene		1	1	173076976	295
ENSMUSG00000105836	processed_pseudogene	Gm17954	ENSMUST00000195893	processed_pseudogene		3	-1	113632184	607
ENSMUSG00000039236	protein_coding	Isg20	ENSMUST00000120331	protein_coding	principal1	7	1	78914235	845
ENSMUSG00000115322	unprocessed_pseudogene	Gm49023	ENSMUST00000226206	unprocessed_pseudogene		14	1	55383597	715
ENSMUSG00000023025	protein_coding	Larp4	ENSMUST00000230521	nonsense_mediated_decay		15	1	99972919	1499
ENSMUSG00000100075	antisense	1700018L02Rik	ENSMUST00000187897	antisense		19	1	29046245	2485
ENSMUSG00000039236	protein_coding	Isg20	ENSMUST00000205981	protein_coding		7	1	78914329	834
ENSMUSG00000063754	processed_pseudogene	Gm10136	ENSMUST00000183196	processed_pseudogene		19	-1	29003842	435
ENSMUSG00000023025	protein_coding	Larp4	ENSMUST00000229426	retained_intron		15	1	100000554	606
ENSMUSG00000106454	processed_pseudogene	Gm17775	ENSMUST00000198542	processed_pseudogene		3	1	113729232	258
ENSMUSG00000103338	unprocessed_pseudogene	Olfr1409-ps1	ENSMUST00000194013	unprocessed_pseudogene		1	-1	173098248	252
ENSMUSG00000023025	protein_coding	Larp4	ENSMUST00000231128	processed_transcript		15	1	100003257	643
ENSMUSG00000060680	processed_pseudogene	Gm8894	ENSMUST00000074642	processed_pseudogene		14	-1	55420789	666
ENSMUSG00000111859	TEC	Gm47983	ENSMUST00000213941	TEC		9	1	102486790	291
ENSMUSG00000106084	processed_pseudogene	Gm18163	ENSMUST00000197877	processed_pseudogene		3	1	113854736	1643
ENSMUSG00000009551	protein_coding	6330409D20Rik	ENSMUST00000151536	processed_transcript		2	-1	32734878	732
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000005016	protein_coding	principal1	3	-1	87930144	2492
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000168070	retained_intron		3	-1	87929361	3254
ENSMUSG00000009551	protein_coding	6330409D20Rik	ENSMUST00000009695	protein_coding	principal1	2	-1	32741016	1119
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000160074	protein_coding		3	-1	87928258	1620
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000160068	processed_transcript		3	-1	87925275	823
ENSMUSG00000017307	protein_coding	Acot8	ENSMUST00000103094	protein_coding	principal1	2	-1	164804882	1152
ENSMUSG00000029545	protein_coding	Acads	ENSMUST00000031524	protein_coding	principal1	5	-1	115119346	1870
ENSMUSG00000006395	polymorphic_pseudogene	Hyi	ENSMUST00000106393	nonsense_mediated_decay		4	1	118359999	843
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000159831	retained_intron		3	-1	87930144	2751
ENSMUSG00000006395	polymorphic_pseudogene	Hyi	ENSMUST00000132882	retained_intron		4	1	118361322	741
ENSMUSG00000026975	protein_coding	Dph7	ENSMUST00000028351	protein_coding	principal1	2	1	24962400	1666
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000161014	retained_intron		3	-1	87930717	3565
ENSMUSG00000029545	protein_coding	Acads	ENSMUST00000153374	processed_transcript		5	-1	115119310	532
ENSMUSG00000017307	protein_coding	Acot8	ENSMUST00000017451	protein_coding		2	-1	164804882	1055
ENSMUSG00000029545	protein_coding	Acads	ENSMUST00000141142	retained_intron		5	-1	115119275	645
ENSMUSG00000017307	protein_coding	Acot8	ENSMUST00000136767	retained_intron		2	-1	164804822	658
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000160143	protein_coding		3	-1	87930583	1568
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000159967	retained_intron		3	-1	87927092	741
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000068044	protein_coding	principal3	14	-1	70351425	4926
ENSMUSG00000006395	polymorphic_pseudogene	Hyi	ENSMUST00000006562	protein_coding	principal1	4	1	118360014	910
ENSMUSG00000029136	protein_coding	Rbks	ENSMUST00000201744	processed_transcript		5	-1	31640538	540
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000161471	processed_transcript		3	-1	87927708	496
ENSMUSG00000004896	protein_coding	Rrnad1	ENSMUST00000164439	nonsense_mediated_decay		3	-1	87930138	792
ENSMUSG00000026584	protein_coding	Scyl3	ENSMUST00000162234	nonsense_mediated_decay		1	1	163929805	4336
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000022688	protein_coding	alternative2	14	-1	70351425	2098
ENSMUSG00000037437	protein_coding	Adam32	ENSMUST00000121438	protein_coding	principal3	8	-1	24948804	2450
ENSMUSG00000035606	protein_coding	Ky	ENSMUST00000039390	protein_coding	principal1	9	1	102505750	5837
ENSMUSG00000026975	protein_coding	Dph7	ENSMUST00000126909	nonsense_mediated_decay		2	1	24962422	1554
ENSMUSG00000037437	protein_coding	Adam32	ENSMUST00000156719	retained_intron		8	-1	24864552	618
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000152067	protein_coding	alternative2	14	-1	70348431	2075
ENSMUSG00000021236	protein_coding	Entpd5	ENSMUST00000110272	protein_coding	principal1	12	-1	84409029	4972
ENSMUSG00000037437	protein_coding	Adam32	ENSMUST00000173069	protein_coding		8	-1	24872679	447
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000163192	protein_coding	principal1	9	-1	36797273	2309
ENSMUSG00000046562	protein_coding	Unc119b	ENSMUST00000060798	protein_coding	principal1	5	-1	115134975	3659
ENSMUSG00000035606	protein_coding	Ky	ENSMUST00000190609	retained_intron		9	1	102521336	443
ENSMUSG00000021236	protein_coding	Entpd5	ENSMUST00000120942	protein_coding	principal1	12	-1	84409014	4881
ENSMUSG00000101563	processed_pseudogene	Gm7364	ENSMUST00000188760	processed_pseudogene		9	1	102551632	1501
ENSMUSG00000021236	protein_coding	Entpd5	ENSMUST00000122194	protein_coding	principal1	12	-1	84400934	2145
ENSMUSG00000026975	protein_coding	Dph7	ENSMUST00000135339	nonsense_mediated_decay		2	1	24962423	817
ENSMUSG00000102126	processed_pseudogene	Gm29143	ENSMUST00000189462	processed_pseudogene		9	1	102556108	201
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000127000	protein_coding		14	-1	70351415	479
ENSMUSG00000030495	protein_coding	Slc7a10	ENSMUST00000001854	protein_coding	principal1	7	1	35186385	1953
ENSMUSG00000046562	protein_coding	Unc119b	ENSMUST00000137140	retained_intron		5	-1	115127513	924
ENSMUSG00000037437	protein_coding	Adam32	ENSMUST00000140573	protein_coding		8	-1	24884595	410
ENSMUSG00000110739	processed_pseudogene	Gm17950	ENSMUST00000214617	processed_pseudogene		9	-1	102571227	646
ENSMUSG00000033124	protein_coding	Atg9a	ENSMUST00000189702	protein_coding	principal1	1	-1	75191926	4110
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000238932	protein_coding	principal1	9	-1	36797393	2220
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000152442	protein_coding		14	-1	70334198	734
ENSMUSG00000021236	protein_coding	Entpd5	ENSMUST00000117286	protein_coding	principal1	12	-1	84400885	1691
ENSMUSG00000026975	protein_coding	Dph7	ENSMUST00000143253	nonsense_mediated_decay		2	1	24962441	760
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000185124	retained_intron		9	-1	36783201	936
ENSMUSG00000100279	lincRNA	Gm29387	ENSMUST00000189074	lincRNA		9	1	102559300	623
ENSMUSG00000037437	protein_coding	Adam32	ENSMUST00000119720	protein_coding	alternative2	8	-1	24948795	2235
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000033875	protein_coding	principal1	8	1	27042555	3603
ENSMUSG00000046562	protein_coding	Unc119b	ENSMUST00000153403	retained_intron		5	-1	115134925	1217
ENSMUSG00000026975	protein_coding	Dph7	ENSMUST00000153375	nonsense_mediated_decay		2	1	24962452	300
ENSMUSG00000033124	protein_coding	Atg9a	ENSMUST00000189820	protein_coding		1	-1	75190382	4218
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000151011	protein_coding		14	-1	70323814	508
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000183422	retained_intron		9	-1	36782719	472
ENSMUSG00000030495	protein_coding	Slc7a10	ENSMUST00000131048	nonsense_mediated_decay		7	1	35186421	1620
ENSMUSG00000021236	protein_coding	Entpd5	ENSMUST00000135061	retained_intron		12	-1	84385410	526
ENSMUSG00000026975	protein_coding	Dph7	ENSMUST00000146382	retained_intron		2	1	24962466	2296
ENSMUSG00000037437	protein_coding	Adam32	ENSMUST00000173559	nonsense_mediated_decay		8	-1	24863426	294
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000183430	retained_intron		9	-1	36786013	655
ENSMUSG00000021236	protein_coding	Entpd5	ENSMUST00000136511	processed_transcript		12	-1	84408984	827
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000139284	protein_coding		14	-1	70331518	458
ENSMUSG00000030495	protein_coding	Slc7a10	ENSMUST00000167441	nonsense_mediated_decay		7	1	35186482	601
ENSMUSG00000026975	protein_coding	Dph7	ENSMUST00000124383	nonsense_mediated_decay		2	1	24962473	553
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000184395	protein_coding		9	-1	36797020	619
ENSMUSG00000043259	protein_coding	Fam13c	ENSMUST00000173042	protein_coding	alternative2	10	1	70440880	3310
ENSMUSG00000017677	protein_coding	Wsb1	ENSMUST00000017821	protein_coding	principal1	11	-1	79254671	2476
ENSMUSG00000037437	protein_coding	Adam32	ENSMUST00000174059	nonsense_mediated_decay		8	-1	24948781	756
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000143153	protein_coding		14	-1	70351394	374
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000184235	protein_coding		9	-1	36790270	511
ENSMUSG00000043259	protein_coding	Fam13c	ENSMUST00000220159	retained_intron		10	1	70440915	3464
ENSMUSG00000030495	protein_coding	Slc7a10	ENSMUST00000146959	protein_coding		7	1	35198915	419
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000209525	protein_coding		8	1	27042561	5767
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000146453	retained_intron		14	-1	70351414	5117
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000183360	processed_transcript		9	-1	36797361	347
ENSMUSG00000021236	protein_coding	Entpd5	ENSMUST00000021662	protein_coding	principal1	12	-1	84405476	4931
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000217339	retained_intron		9	-1	36790492	1596
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000209856	protein_coding		8	1	27042596	3954
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000115086	protein_coding		9	-1	36797393	2220
ENSMUSG00000015829	protein_coding	Tnr	ENSMUST00000192069	protein_coding	principal1	1	1	159523769	12202
ENSMUSG00000029136	protein_coding	Rbks	ENSMUST00000031018	protein_coding	principal1	5	-1	31697627	1042
ENSMUSG00000037437	protein_coding	Adam32	ENSMUST00000133088	retained_intron		8	-1	24948804	745
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000152202	retained_intron		14	-1	70348433	1398
ENSMUSG00000062762	protein_coding	Ei24	ENSMUST00000239021	protein_coding		9	-1	36797068	2104
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000142598	retained_intron		14	-1	70351425	436
ENSMUSG00000001802	protein_coding	Lrp3	ENSMUST00000153163	processed_transcript		7	-1	35202959	420
ENSMUSG00000021236	protein_coding	Entpd5	ENSMUST00000072061	protein_coding		12	-1	84405476	4858
ENSMUSG00000015829	protein_coding	Tnr	ENSMUST00000195199	retained_intron		1	1	159523841	660
ENSMUSG00000108017	processed_pseudogene	Gm18539	ENSMUST00000204745	processed_pseudogene		6	1	48981120	1090
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000145040	retained_intron		14	-1	70313925	364
ENSMUSG00000118050	processed_pseudogene	Gm18739	ENSMUST00000236271	processed_pseudogene		18	-1	57117280	550
ENSMUSG00000033124	protein_coding	Atg9a	ENSMUST00000189665	nonsense_mediated_decay		1	-1	75191923	4013
ENSMUSG00000015829	protein_coding	Tnr	ENSMUST00000193325	protein_coding		1	1	159773770	837
ENSMUSG00000029136	protein_coding	Rbks	ENSMUST00000202036	processed_transcript		5	-1	31686093	412
ENSMUSG00000001802	protein_coding	Lrp3	ENSMUST00000155404	retained_intron		7	-1	35203225	2089
ENSMUSG00000107151	TEC	Gm43810	ENSMUST00000201018	TEC		5	1	31708396	232
ENSMUSG00000015829	protein_coding	Tnr	ENSMUST00000192457	protein_coding		1	1	159850397	541
ENSMUSG00000086713	lincRNA	4930407G08Rik	ENSMUST00000145831	lincRNA		4	1	107953932	698
ENSMUSG00000043259	protein_coding	Fam13c	ENSMUST00000062883	protein_coding	principal3	10	1	70440926	3262
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000098851	protein_coding		8	1	27042598	1368
ENSMUSG00000015829	protein_coding	Tnr	ENSMUST00000111669	protein_coding	principal1	1	1	159737510	4424
ENSMUSG00000107656	antisense	4930563H07Rik	ENSMUST00000203494	antisense		6	-1	48999616	628
ENSMUSG00000106894	antisense	Gm17130	ENSMUST00000201542	antisense		5	-1	32010863	2683
ENSMUSG00000100128	unprocessed_pseudogene	Vmn1r-ps25	ENSMUST00000173545	unprocessed_pseudogene		6	-1	89699517	799
ENSMUSG00000022094	protein_coding	Slc39a14	ENSMUST00000155825	retained_intron		14	-1	70311240	845
ENSMUSG00000114502	lincRNA	Gm40975	ENSMUST00000224761	lincRNA		13	1	60955219	632
ENSMUSG00000103719	antisense	Gm38039	ENSMUST00000195328	antisense		1	-1	159931726	443
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000211393	protein_coding		8	1	27042622	2143
ENSMUSG00000033124	protein_coding	Atg9a	ENSMUST00000239085	nonsense_mediated_decay		1	-1	75191955	3741
ENSMUSG00000103225	TEC	Gm37731	ENSMUST00000194545	TEC		1	1	159595148	2237
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000211518	protein_coding		8	1	27042641	523
ENSMUSG00000039308	protein_coding	Ndst2	ENSMUST00000223679	protein_coding	principal1	14	-1	20734562	3907
ENSMUSG00000043259	protein_coding	Fam13c	ENSMUST00000105436	protein_coding	alternative2	10	1	70440668	3380
ENSMUSG00000004096	protein_coding	Cwc15	ENSMUST00000004200	protein_coding	principal1	9	1	14500617	1111
ENSMUSG00000033124	protein_coding	Atg9a	ENSMUST00000188347	protein_coding	principal1	1	-1	75192196	4041
ENSMUSG00000039308	protein_coding	Ndst2	ENSMUST00000225000	protein_coding	principal1	14	-1	20731110	3661
ENSMUSG00000033124	protein_coding	Atg9a	ENSMUST00000187785	protein_coding		1	-1	75186047	832
ENSMUSG00000079630	protein_coding	Rhox4f	ENSMUST00000115170	protein_coding	principal1	X	-1	37607704	948
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000211490	processed_transcript		8	1	27042705	504
ENSMUSG00000096311	unprocessed_pseudogene	Gm3681	ENSMUST00000179940	unprocessed_pseudogene		X	-1	30143416	639
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000209555	processed_transcript		8	1	27042802	386
ENSMUSG00000004096	protein_coding	Cwc15	ENSMUST00000213913	protein_coding	principal1	9	1	14500647	831
ENSMUSG00000017677	protein_coding	Wsb1	ENSMUST00000150416	retained_intron		11	-1	79243024	2338
ENSMUSG00000079630	protein_coding	Rhox4f	ENSMUST00000183974	retained_intron		X	-1	37607544	1847
ENSMUSG00000039308	protein_coding	Ndst2	ENSMUST00000224829	protein_coding		14	-1	20725586	1147
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000211281	processed_transcript		8	1	27042825	1862
ENSMUSG00000004096	protein_coding	Cwc15	ENSMUST00000215143	protein_coding		9	1	14500886	662
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000210141	nonsense_mediated_decay		8	1	27045029	567
ENSMUSG00000033124	protein_coding	Atg9a	ENSMUST00000188430	retained_intron		1	-1	75191725	967
ENSMUSG00000004096	protein_coding	Cwc15	ENSMUST00000216619	retained_intron		9	1	14507807	526
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000210765	protein_coding		8	1	27045108	382
ENSMUSG00000033124	protein_coding	Atg9a	ENSMUST00000187601	retained_intron		1	-1	75191962	716
ENSMUSG00000039308	protein_coding	Ndst2	ENSMUST00000225419	nonsense_mediated_decay		14	-1	20730318	3137
ENSMUSG00000039215	protein_coding	Svs1	ENSMUST00000037696	protein_coding	principal1	6	1	48986861	2775
ENSMUSG00000033124	protein_coding	Atg9a	ENSMUST00000186744	protein_coding		1	-1	75191714	457
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000210225	retained_intron		8	1	27045271	261
ENSMUSG00000039308	protein_coding	Ndst2	ENSMUST00000224234	retained_intron		14	-1	20729222	678
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000211012	retained_intron		8	1	27048837	549
ENSMUSG00000107457	processed_pseudogene	Gm19173	ENSMUST00000204494	processed_pseudogene		6	1	48995224	1523
ENSMUSG00000039308	protein_coding	Ndst2	ENSMUST00000225320	retained_intron		14	-1	20728688	291
ENSMUSG00000010914	protein_coding	Pdhx	ENSMUST00000011058	protein_coding	principal1	2	-1	103073513	2506
ENSMUSG00000031485	protein_coding	Plpbp	ENSMUST00000211756	retained_intron		8	1	27050774	734
ENSMUSG00000017677	protein_coding	Wsb1	ENSMUST00000131818	nonsense_mediated_decay		11	-1	79248659	1260
ENSMUSG00000118177	processed_pseudogene	Gm19486	ENSMUST00000235434	processed_pseudogene		18	-1	57119886	174
ENSMUSG00000033124	protein_coding	Atg9a	ENSMUST00000040689	protein_coding	principal1	1	-1	75191923	3764
ENSMUSG00000035048	protein_coding	Anapc13	ENSMUST00000190279	protein_coding	principal1	9	1	102626296	589
ENSMUSG00000039308	protein_coding	Ndst2	ENSMUST00000047490	protein_coding	principal1	14	-1	20730327	3305
ENSMUSG00000017677	protein_coding	Wsb1	ENSMUST00000153585	processed_transcript		11	-1	79242949	1002
ENSMUSG00000091154	antisense	Proscos	ENSMUST00000178990	antisense		8	-1	27043042	666
ENSMUSG00000010914	protein_coding	Pdhx	ENSMUST00000111183	protein_coding		2	-1	103073462	2078
ENSMUSG00000091154	antisense	Proscos	ENSMUST00000163731	antisense		8	-1	27042997	616
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000186148	processed_transcript		1	-1	75199108	195
ENSMUSG00000010914	protein_coding	Pdhx	ENSMUST00000132449	protein_coding		2	-1	103073335	655
ENSMUSG00000035048	protein_coding	Anapc13	ENSMUST00000188398	protein_coding	principal1	9	1	102626324	727
ENSMUSG00000085967	antisense	Gm12530	ENSMUST00000152074	antisense		4	1	57172071	1759
ENSMUSG00000017677	protein_coding	Wsb1	ENSMUST00000145772	nonsense_mediated_decay		11	-1	79254669	1007
ENSMUSG00000035048	protein_coding	Anapc13	ENSMUST00000038673	protein_coding	principal1	9	1	102626663	411
ENSMUSG00000083388	processed_pseudogene	Gm11550	ENSMUST00000118210	processed_pseudogene		3	-1	36540081	699
ENSMUSG00000035048	protein_coding	Anapc13	ENSMUST00000186693	protein_coding	principal1	9	1	102626679	595
ENSMUSG00000017677	protein_coding	Wsb1	ENSMUST00000131848	nonsense_mediated_decay		11	-1	79254470	819
ENSMUSG00000035048	protein_coding	Anapc13	ENSMUST00000190354	retained_intron		9	1	102628512	1216
ENSMUSG00000108688	TEC	Gm44985	ENSMUST00000206202	TEC		7	-1	122168044	1016
ENSMUSG00000065999	protein_coding	Zfp985	ENSMUST00000139784	protein_coding		4	1	147553277	628
ENSMUSG00000017677	protein_coding	Wsb1	ENSMUST00000137890	retained_intron		11	-1	79251024	901
ENSMUSG00000024780	protein_coding	Cdc37l1	ENSMUST00000225310	protein_coding	alternative2	19	1	28990352	4079
ENSMUSG00000024780	protein_coding	Cdc37l1	ENSMUST00000225210	protein_coding	alternative2	19	1	28990367	4163
ENSMUSG00000024780	protein_coding	Cdc37l1	ENSMUST00000224511	protein_coding	alternative2	19	1	28990381	2944
ENSMUSG00000024780	protein_coding	Cdc37l1	ENSMUST00000224599	protein_coding		19	1	28990485	1769
ENSMUSG00000030770	protein_coding	Parva	ENSMUST00000106643	protein_coding	principal2	7	1	112427505	2222
ENSMUSG00000096410	IG_V_gene	Ighv1-19	ENSMUST00000193855	IG_V_gene	principal5	12	-1	114709135	405
ENSMUSG00000096410	IG_V_gene	Ighv1-19	ENSMUST00000103505	IG_V_gene	alternative2	12	-1	114709081	348
ENSMUSG00000095761	IG_V_gene	Ighv1-20	ENSMUST00000194968	IG_V_gene	principal5	12	-1	114724205	351
ENSMUSG00000095761	IG_V_gene	Ighv1-20	ENSMUST00000103506	IG_V_gene	alternative2	12	-1	114724205	348
ENSMUSG00000024780	protein_coding	Cdc37l1	ENSMUST00000050148	protein_coding	principal2	19	1	28990500	5179
ENSMUSG00000102678	IG_V_pseudogene	Ighv1-21-1	ENSMUST00000195790	IG_V_pseudogene		12	-1	114736678	351
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000161305	protein_coding	alternative2	15	1	76380261	5193
ENSMUSG00000024780	protein_coding	Cdc37l1	ENSMUST00000224092	protein_coding		19	1	28999317	449
ENSMUSG00000030770	protein_coding	Parva	ENSMUST00000033030	protein_coding	principal2	7	1	112427706	4454
ENSMUSG00000065999	protein_coding	Zfp985	ENSMUST00000143885	protein_coding		4	1	147553339	552
ENSMUSG00000024780	protein_coding	Cdc37l1	ENSMUST00000225598	retained_intron		19	1	29011570	557
ENSMUSG00000102654	IG_V_pseudogene	Ighv1-21	ENSMUST00000194856	IG_V_pseudogene		12	-1	114740841	351
ENSMUSG00000108822	lincRNA	Gm44787	ENSMUST00000208339	lincRNA		11	-1	79273893	1069
ENSMUSG00000065999	protein_coding	Zfp985	ENSMUST00000081742	protein_coding	principal1	4	1	147553339	2762
ENSMUSG00000108822	lincRNA	Gm44787	ENSMUST00000208268	lincRNA		11	-1	79273844	176
ENSMUSG00000024780	protein_coding	Cdc37l1	ENSMUST00000223694	nonsense_mediated_decay		19	1	29011898	609
ENSMUSG00000028964	protein_coding	Park7	ENSMUST00000030805	protein_coding	principal1	4	-1	150909926	908
ENSMUSG00000024780	protein_coding	Cdc37l1	ENSMUST00000224830	protein_coding		19	1	29011909	337
ENSMUSG00000094561	IG_V_gene	Ighv1-22	ENSMUST00000103507	IG_V_gene	principal1	12	-1	114746706	351
ENSMUSG00000001802	protein_coding	Lrp3	ENSMUST00000122409	protein_coding		7	-1	35215498	4147
ENSMUSG00000028964	protein_coding	Park7	ENSMUST00000105675	protein_coding	principal1	4	-1	150914437	882
ENSMUSG00000055072	TEC	Gm9964	ENSMUST00000068448	TEC		11	-1	79296906	728
ENSMUSG00000033032	protein_coding	Afap1l1	ENSMUST00000154876	nonsense_mediated_decay		18	-1	61786611	2842
ENSMUSG00000030770	protein_coding	Parva	ENSMUST00000139720	nonsense_mediated_decay		7	1	112427905	5869
ENSMUSG00000028964	protein_coding	Park7	ENSMUST00000105674	protein_coding	principal1	4	-1	150909626	937
ENSMUSG00000001802	protein_coding	Lrp3	ENSMUST00000118444	protein_coding	principal1	7	-1	35215292	3877
ENSMUSG00000103290	IG_V_gene	Ighv1-23	ENSMUST00000194625	IG_V_gene	principal1	12	-1	114764883	351
ENSMUSG00000030770	protein_coding	Parva	ENSMUST00000106640	protein_coding	alternative2	7	1	112519701	1465
ENSMUSG00000028964	protein_coding	Park7	ENSMUST00000105676	protein_coding		4	-1	150908413	582
ENSMUSG00000094241	IG_V_gene	Ighv1-24	ENSMUST00000191861	IG_V_gene		12	-1	114773361	351
ENSMUSG00000094241	IG_V_gene	Ighv1-24	ENSMUST00000103509	IG_V_gene	principal1	12	-1	114773221	294
ENSMUSG00000030770	protein_coding	Parva	ENSMUST00000126047	processed_transcript		7	1	112569250	354
ENSMUSG00000028964	protein_coding	Park7	ENSMUST00000105673	protein_coding	principal1	4	-1	150909651	919
ENSMUSG00000107369	processed_pseudogene	Gstm2-ps1	ENSMUST00000201478	processed_pseudogene		5	-1	116633564	657
ENSMUSG00000100426	lincRNA	Gm4208	ENSMUST00000189802	lincRNA		1	-1	62832370	871
ENSMUSG00000028964	protein_coding	Park7	ENSMUST00000132265	processed_transcript		4	-1	150901835	472
ENSMUSG00000102952	IG_V_pseudogene	Ighv1-25	ENSMUST00000195638	IG_V_pseudogene		12	-1	114781834	345
ENSMUSG00000085049	antisense	Parvaos	ENSMUST00000154848	antisense		7	-1	112535683	1285
ENSMUSG00000037747	protein_coding	Phyhipl	ENSMUST00000046513	protein_coding	principal3	10	-1	70599291	2877
ENSMUSG00000028964	protein_coding	Park7	ENSMUST00000128075	protein_coding		4	-1	150909483	715
ENSMUSG00000045991	protein_coding	Onecut2	ENSMUST00000175965	protein_coding	principal1	18	1	64340020	16234
ENSMUSG00000107237	lincRNA	Gm29926	ENSMUST00000201443	lincRNA		5	1	116811231	660
ENSMUSG00000099384	lincRNA	1700110C19Rik	ENSMUST00000187397	lincRNA		17	1	10324602	680
ENSMUSG00000099384	lincRNA	1700110C19Rik	ENSMUST00000188715	lincRNA		17	1	10324602	717
ENSMUSG00000041512	TEC	4930569F06Rik	ENSMUST00000036821	TEC		5	1	116821454	433
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000162204	retained_intron		15	1	76380513	1772
ENSMUSG00000118375	processed_pseudogene	Gm36804	ENSMUST00000237830	processed_pseudogene		18	-1	64428669	317
ENSMUSG00000085836	lincRNA	Gm13074	ENSMUST00000124848	lincRNA		4	1	141347814	2735
ENSMUSG00000028964	protein_coding	Park7	ENSMUST00000148626	retained_intron		4	-1	150909828	640
ENSMUSG00000084238	processed_pseudogene	Gm13076	ENSMUST00000118041	processed_pseudogene		4	-1	141357091	204
ENSMUSG00000060096	processed_pseudogene	Amd-ps3	ENSMUST00000072796	processed_pseudogene		18	-1	64449689	1005
ENSMUSG00000106909	lincRNA	Gm43122	ENSMUST00000202259	lincRNA		5	-1	116830520	526
ENSMUSG00000028964	protein_coding	Park7	ENSMUST00000134751	protein_coding		4	-1	150909868	478
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000105861	protein_coding	alternative2	4	-1	135353321	3797
ENSMUSG00000106909	lincRNA	Gm43122	ENSMUST00000201752	lincRNA		5	-1	116830554	354
ENSMUSG00000028964	protein_coding	Park7	ENSMUST00000146184	protein_coding		4	-1	150914206	584
ENSMUSG00000037747	protein_coding	Phyhipl	ENSMUST00000162251	protein_coding	alternative1	10	-1	70592820	1540
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000115640	protein_coding		16	1	18248883	2367
ENSMUSG00000037747	protein_coding	Phyhipl	ENSMUST00000162144	protein_coding		10	-1	70655958	635
ENSMUSG00000094546	IG_V_gene	Ighv1-26	ENSMUST00000103510	IG_V_gene	principal1	12	-1	114788805	351
ENSMUSG00000089907	processed_transcript	Gm16169	ENSMUST00000162432	antisense		17	1	10807834	2128
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000140206	protein_coding		16	1	18248883	3520
ENSMUSG00000030867	protein_coding	Plk1	ENSMUST00000033154	protein_coding	principal1	7	1	122159439	2199
ENSMUSG00000037747	protein_coding	Phyhipl	ENSMUST00000162470	retained_intron		10	-1	70599082	1877
ENSMUSG00000089907	processed_transcript	Gm16169	ENSMUST00000159155	retained_intron		17	1	10807839	1491
ENSMUSG00000107327	processed_pseudogene	Gm7478	ENSMUST00000201054	processed_pseudogene		5	1	117058812	581
ENSMUSG00000037747	protein_coding	Phyhipl	ENSMUST00000163054	retained_intron		10	-1	70599290	3485
ENSMUSG00000089633	antisense	A230009B12Rik	ENSMUST00000160763	antisense		17	1	10456216	1145
ENSMUSG00000030867	protein_coding	Plk1	ENSMUST00000206470	nonsense_mediated_decay		7	1	122159507	722
ENSMUSG00000026584	protein_coding	Scyl3	ENSMUST00000161908	protein_coding	alternative2	1	1	163929100	3718
ENSMUSG00000089633	antisense	A230009B12Rik	ENSMUST00000159422	antisense		17	1	10456222	898
ENSMUSG00000030867	protein_coding	Plk1	ENSMUST00000205901	protein_coding		7	1	122159581	582
ENSMUSG00000089633	antisense	A230009B12Rik	ENSMUST00000159602	antisense		17	1	10456296	1812
ENSMUSG00000026584	protein_coding	Scyl3	ENSMUST00000163033	processed_transcript		1	1	163943771	516
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000062855	protein_coding	principal3	10	-1	79555091	2562
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000121503	protein_coding	alternative1	3	1	90072649	1139
ENSMUSG00000026584	protein_coding	Scyl3	ENSMUST00000159516	protein_coding		1	1	163941115	545
ENSMUSG00000089633	antisense	A230009B12Rik	ENSMUST00000160738	antisense		17	1	10464837	743
ENSMUSG00000112678	processed_pseudogene	Gm47492	ENSMUST00000219009	processed_pseudogene		10	1	112691579	303
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000028238	protein_coding	principal1	2	-1	35201120	3081
ENSMUSG00000026584	protein_coding	Scyl3	ENSMUST00000162920	retained_intron		1	1	163951213	1825
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000059696	retained_intron		16	1	18249002	2082
ENSMUSG00000059013	protein_coding	Sh2d3c	ENSMUST00000074248	protein_coding		2	1	32721055	3092
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000165028	protein_coding	alternative2	10	-1	79555199	2676
ENSMUSG00000005667	protein_coding	Mthfd2	ENSMUST00000005810	protein_coding	principal1	6	-1	83317606	2085
ENSMUSG00000031508	protein_coding	Ankrd10	ENSMUST00000210530	nonsense_mediated_decay		8	-1	11635754	2398
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000168601	retained_intron		10	-1	79542165	931
ENSMUSG00000059013	protein_coding	Sh2d3c	ENSMUST00000124133	processed_transcript		2	1	32727706	369
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000153292	retained_intron		16	1	18249009	2553
ENSMUSG00000100314	lincRNA	1700010J16Rik	ENSMUST00000187828	lincRNA		10	1	112726888	442
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000096385	protein_coding	principal4	15	1	76380513	5268
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000147273	retained_intron		16	1	18249009	2971
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000119570	protein_coding	principal2	3	1	90072651	2233
ENSMUSG00000059013	protein_coding	Sh2d3c	ENSMUST00000113242	protein_coding	principal1	2	1	32727706	3107
ENSMUSG00000005667	protein_coding	Mthfd2	ENSMUST00000203847	nonsense_mediated_decay		6	-1	83317553	1421
ENSMUSG00000100314	lincRNA	1700010J16Rik	ENSMUST00000189116	lincRNA		10	1	112726926	890
ENSMUSG00000059013	protein_coding	Sh2d3c	ENSMUST00000141670	processed_transcript		2	1	32735281	794
ENSMUSG00000005667	protein_coding	Mthfd2	ENSMUST00000141044	retained_intron		6	-1	83309307	627
ENSMUSG00000026584	protein_coding	Scyl3	ENSMUST00000027876	protein_coding	principal3	1	1	163929765	4368
ENSMUSG00000005667	protein_coding	Mthfd2	ENSMUST00000139802	retained_intron		6	-1	83310548	358
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000029549	protein_coding		3	1	90079540	2230
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000100099	protein_coding		16	1	18249062	2235
ENSMUSG00000037747	protein_coding	Phyhipl	ENSMUST00000162793	protein_coding		10	-1	70655965	598
ENSMUSG00000005667	protein_coding	Mthfd2	ENSMUST00000141193	retained_intron		6	-1	83311593	495
ENSMUSG00000005667	protein_coding	Mthfd2	ENSMUST00000203375	retained_intron		6	-1	83312405	612
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000167760	retained_intron		10	-1	79544770	1116
ENSMUSG00000005667	protein_coding	Mthfd2	ENSMUST00000204472	protein_coding		6	-1	83325908	443
ENSMUSG00000059013	protein_coding	Sh2d3c	ENSMUST00000131101	processed_transcript		2	1	32741490	805
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000118566	protein_coding		3	1	90079654	2190
ENSMUSG00000108053	TEC	Gm43890	ENSMUST00000203437	TEC		6	-1	83316943	2799
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000231509	protein_coding		16	1	18250011	290
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000170950	processed_transcript		10	-1	79544352	412
ENSMUSG00000059013	protein_coding	Sh2d3c	ENSMUST00000139563	processed_transcript		2	1	32741492	632
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000145112	protein_coding	principal1	16	1	18250021	842
ENSMUSG00000026584	protein_coding	Scyl3	ENSMUST00000170359	protein_coding	alternative2	1	1	163929790	4288
ENSMUSG00000037196	protein_coding	Pacrg	ENSMUST00000041463	protein_coding	principal1	17	-1	10840311	1475
ENSMUSG00000037747	protein_coding	Phyhipl	ENSMUST00000162571	processed_transcript		10	-1	70651925	2011
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000128045	protein_coding		16	1	18251422	276
ENSMUSG00000107087	lincRNA	Gm34411	ENSMUST00000201180	lincRNA		5	1	73263429	280
ENSMUSG00000085241	processed_transcript	Snhg3	ENSMUST00000155816	processed_transcript		4	-1	132353663	332
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000232293	protein_coding		16	1	18252125	603
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000167183	nonsense_mediated_decay		10	-1	79555114	677
ENSMUSG00000037747	protein_coding	Phyhipl	ENSMUST00000161687	processed_transcript		10	-1	70655963	1665
ENSMUSG00000037747	protein_coding	Phyhipl	ENSMUST00000159025	processed_transcript		10	-1	70607562	326
ENSMUSG00000106999	TEC	Gm42734	ENSMUST00000201656	TEC		5	1	73272872	878
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000084846	protein_coding	alternative2	4	-1	135353244	3740
ENSMUSG00000037196	protein_coding	Pacrg	ENSMUST00000160599	processed_transcript		17	-1	10631067	406
ENSMUSG00000037747	protein_coding	Phyhipl	ENSMUST00000160127	processed_transcript		10	-1	70626392	359
ENSMUSG00000112273	processed_pseudogene	Gm29783	ENSMUST00000219398	processed_pseudogene		10	-1	70505248	369
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000131211	retained_intron		16	1	18252221	603
ENSMUSG00000089941	antisense	Gm16168	ENSMUST00000161274	antisense		17	1	10496446	421
ENSMUSG00000022721	protein_coding	Trmt2a	ENSMUST00000232015	retained_intron		16	1	18252907	517
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000113025	retained_intron		2	-1	35201120	4346
ENSMUSG00000089941	antisense	Gm16168	ENSMUST00000161091	antisense		17	1	10496453	1359
ENSMUSG00000085241	processed_transcript	Snhg3	ENSMUST00000152943	processed_transcript		4	-1	132353686	437
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000137709	retained_intron		2	-1	35184050	657
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000136342	protein_coding	principal3	4	-1	135353244	3152
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000230751	protein_coding		2	-1	35200976	925
ENSMUSG00000085241	processed_transcript	Snhg3	ENSMUST00000141090	processed_transcript		4	-1	132352933	581
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000230657	protein_coding		2	-1	35189960	415
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000030613	protein_coding	alternative2	4	-1	135353136	2940
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000147430	retained_intron		3	1	90079665	655
ENSMUSG00000100175	lincRNA	1700025M24Rik	ENSMUST00000188758	lincRNA		5	-1	73284175	645
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000142015	retained_intron		2	-1	35184148	639
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000131354	retained_intron		3	1	90079665	2374
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000140050	protein_coding		4	-1	135327223	952
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000164895	protein_coding		10	-1	79554884	729
ENSMUSG00000100175	lincRNA	1700025M24Rik	ENSMUST00000187620	lincRNA		5	-1	73284187	577
ENSMUSG00000033032	protein_coding	Afap1l1	ENSMUST00000120472	protein_coding	principal1	18	-1	61786702	3444
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000202602	retained_intron		2	-1	35200972	800
ENSMUSG00000085241	processed_transcript	Snhg3	ENSMUST00000151374	processed_transcript		4	-1	132353633	426
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000165778	protein_coding		10	-1	79555121	346
ENSMUSG00000100175	lincRNA	1700025M24Rik	ENSMUST00000191524	lincRNA		5	-1	73284181	725
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000155483	retained_intron		2	-1	35192663	731
ENSMUSG00000085241	processed_transcript	Snhg3	ENSMUST00000136127	processed_transcript		4	-1	132353336	440
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000165866	protein_coding		10	-1	79550809	767
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000201694	retained_intron		2	-1	35191422	3717
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000148543	processed_transcript		2	-1	35200789	400
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000170018	protein_coding		10	-1	79555077	380
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000119158	protein_coding		3	1	90079715	1090
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000167689	protein_coding		10	-1	79554605	369
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000155359	processed_transcript		2	-1	35200947	494
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000201896	retained_intron		2	-1	35200982	5003
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000149432	protein_coding		3	1	90079891	459
ENSMUSG00000031508	protein_coding	Ankrd10	ENSMUST00000169782	protein_coding		8	-1	11635757	5156
ENSMUSG00000033032	protein_coding	Afap1l1	ENSMUST00000147278	retained_intron		18	-1	61786660	2960
ENSMUSG00000026878	protein_coding	Rab14	ENSMUST00000126224	processed_transcript		2	-1	35200978	355
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000127955	protein_coding		3	1	90080442	341
ENSMUSG00000042570	protein_coding	Mier2	ENSMUST00000172158	protein_coding		10	-1	79541960	1400
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000149115	retained_intron		3	1	90086371	302
ENSMUSG00000098702	antisense	1500015A07Rik	ENSMUST00000184181	antisense		18	1	61726390	1865
ENSMUSG00000096051	protein_coding	Vmn1r40	ENSMUST00000228642	protein_coding	principal1	6	1	89707540	2862
ENSMUSG00000031508	protein_coding	Ankrd10	ENSMUST00000033905	protein_coding	principal1	8	-1	11635754	2285
ENSMUSG00000096051	protein_coding	Vmn1r40	ENSMUST00000226925	protein_coding	principal1	6	1	89707540	3011
ENSMUSG00000098702	antisense	1500015A07Rik	ENSMUST00000184678	antisense		18	1	61726433	890
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000133281	retained_intron		3	1	90087309	427
ENSMUSG00000098702	antisense	1500015A07Rik	ENSMUST00000184530	antisense		18	1	61734357	423
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000023805	protein_coding	principal1	15	-1	102189058	2279
ENSMUSG00000096051	protein_coding	Vmn1r40	ENSMUST00000228485	protein_coding		6	1	89707540	2689
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000151798	retained_intron		3	1	90087439	376
ENSMUSG00000096051	protein_coding	Vmn1r40	ENSMUST00000227669	protein_coding		6	1	89707540	2540
ENSMUSG00000006218	protein_coding	Fam131c	ENSMUST00000006380	protein_coding	principal1	4	1	141368220	1433
ENSMUSG00000096051	protein_coding	Vmn1r40	ENSMUST00000075158	protein_coding	principal1	6	1	89714203	933
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000133361	retained_intron		3	1	90087456	357
ENSMUSG00000031508	protein_coding	Ankrd10	ENSMUST00000211174	nonsense_mediated_decay		8	-1	11635754	2447
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000231029	protein_coding		15	-1	102179019	623
ENSMUSG00000114663	processed_pseudogene	Gm40976	ENSMUST00000225914	processed_pseudogene		13	-1	60962931	112
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230288	protein_coding		15	-1	102188975	1786
ENSMUSG00000031508	protein_coding	Ankrd10	ENSMUST00000211690	retained_intron		8	-1	11624626	2625
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000149734	retained_intron		3	1	90088061	512
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000143281	retained_intron		3	1	90089631	692
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000077451	protein_coding	alternative1	11	1	80209019	3297
ENSMUSG00000031508	protein_coding	Ankrd10	ENSMUST00000211445	processed_transcript		8	-1	11635036	1767
ENSMUSG00000027940	protein_coding	Tpm3	ENSMUST00000136125	processed_transcript		3	1	90090059	509
ENSMUSG00000005732	protein_coding	Ranbp1	ENSMUST00000115645	protein_coding	principal1	16	-1	18248732	1085
ENSMUSG00000031508	protein_coding	Ankrd10	ENSMUST00000209915	nonsense_mediated_decay		8	-1	11635030	666
ENSMUSG00000031508	protein_coding	Ankrd10	ENSMUST00000211389	retained_intron		8	-1	11635754	1359
ENSMUSG00000031508	protein_coding	Ankrd10	ENSMUST00000210876	protein_coding		8	-1	11633950	467
ENSMUSG00000005732	protein_coding	Ranbp1	ENSMUST00000052325	protein_coding		16	-1	18248067	923
ENSMUSG00000045917	protein_coding	Tmem268	ENSMUST00000077709	protein_coding	principal1	4	1	63558781	3765
ENSMUSG00000026708	protein_coding	Cenpl	ENSMUST00000028035	protein_coding		1	1	161070713	4883
ENSMUSG00000005732	protein_coding	Ranbp1	ENSMUST00000123073	retained_intron		16	-1	18248646	626
ENSMUSG00000005732	protein_coding	Ranbp1	ENSMUST00000134035	processed_transcript		16	-1	18248434	599
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000150619	retained_intron		4	-1	135353134	4542
ENSMUSG00000114419	sense_intronic	5430414B19Rik	ENSMUST00000224044	sense_intronic		14	1	16271089	750
ENSMUSG00000045917	protein_coding	Tmem268	ENSMUST00000126738	processed_transcript		4	1	63558856	268
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000093107	protein_coding	alternative1	11	1	54100924	2263
ENSMUSG00000113682	TEC	Gm48630	ENSMUST00000222188	TEC		12	-1	110987118	1135
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000136570	retained_intron		4	-1	135324849	373
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000092857	protein_coding	principal3	11	1	80209084	3687
ENSMUSG00000049807	protein_coding	Arhgap23	ENSMUST00000121799	protein_coding	principal1	11	1	97415533	5816
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000162914	retained_intron		4	-1	135332233	512
ENSMUSG00000045917	protein_coding	Tmem268	ENSMUST00000124332	protein_coding		4	1	63560227	822
ENSMUSG00000049807	protein_coding	Arhgap23	ENSMUST00000152933	processed_transcript		11	1	97436285	637
ENSMUSG00000045917	protein_coding	Tmem268	ENSMUST00000150360	protein_coding		4	1	63560227	823
ENSMUSG00000113056	lincRNA	6030440G07Rik	ENSMUST00000221849	lincRNA		12	1	110994398	1090
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000151251	retained_intron		4	-1	135338073	681
ENSMUSG00000113597	TEC	Gm48631	ENSMUST00000223165	TEC		12	-1	111018402	959
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000160986	retained_intron		15	1	76380523	9830
ENSMUSG00000047656	protein_coding	Trpt1	ENSMUST00000237234	processed_transcript		19	1	6996131	972
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000131301	nonsense_mediated_decay		4	-1	135342462	796
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000162655	protein_coding	principal1	9	-1	102626534	4180
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000160728	protein_coding		15	1	76380532	536
ENSMUSG00000049807	protein_coding	Arhgap23	ENSMUST00000142465	nonsense_mediated_decay		11	1	97452130	4531
ENSMUSG00000045917	protein_coding	Tmem268	ENSMUST00000080336	protein_coding	principal1	4	1	63560360	3630
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000154788	retained_intron		4	-1	135342518	776
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000162319	processed_transcript		15	1	76380553	1244
ENSMUSG00000049807	protein_coding	Arhgap23	ENSMUST00000093940	protein_coding		11	1	97491144	2409
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000131373	protein_coding		4	-1	135353142	619
ENSMUSG00000020067	protein_coding	Mypn	ENSMUST00000095580	protein_coding	principal1	10	-1	63203952	5246
ENSMUSG00000083943	processed_pseudogene	Gm11483	ENSMUST00000119839	processed_pseudogene		4	-1	63567660	247
ENSMUSG00000060679	protein_coding	Mrps9	ENSMUST00000057208	protein_coding	principal1	1	1	42851233	1418
ENSMUSG00000117760	antisense	Gm41561	ENSMUST00000237260	antisense		17	-1	30857436	487
ENSMUSG00000020067	protein_coding	Mypn	ENSMUST00000218978	protein_coding		10	-1	63122684	1833
ENSMUSG00000118038	lincRNA	Gm9895	ENSMUST00000235636	lincRNA		19	1	29067347	618
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000134854	retained_intron		4	-1	135353151	2847
ENSMUSG00000118205	TEC	Gm50248	ENSMUST00000237418	TEC		17	-1	30871209	279
ENSMUSG00000049807	protein_coding	Arhgap23	ENSMUST00000107601	protein_coding		11	1	97450160	5450
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000161683	retained_intron		15	1	76427900	4260
ENSMUSG00000118320	processed_pseudogene	Gm50425	ENSMUST00000236843	processed_pseudogene		19	-1	29090255	444
ENSMUSG00000033253	protein_coding	Szt2	ENSMUST00000075406	protein_coding	principal1	4	-1	118409273	10965
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000136409	nonsense_mediated_decay		4	-1	135347204	637
ENSMUSG00000103207	TEC	Gm9874	ENSMUST00000194957	TEC		17	1	30484661	1464
ENSMUSG00000109697	lincRNA	Gm34030	ENSMUST00000211434	lincRNA		8	-1	57334387	1126
ENSMUSG00000103207	TEC	Gm9874	ENSMUST00000194024	TEC		17	1	30485511	453
ENSMUSG00000109697	lincRNA	Gm34030	ENSMUST00000209202	lincRNA		8	-1	57334585	683
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000160631	processed_transcript		15	1	76428657	706
ENSMUSG00000038756	protein_coding	Ttll6	ENSMUST00000167258	protein_coding	principal2	11	1	96133786	3205
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230322	nonsense_mediated_decay		15	-1	102188674	1391
ENSMUSG00000040552	protein_coding	C3ar1	ENSMUST00000042081	protein_coding	principal1	6	-1	122856161	4305
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000161962	processed_transcript		15	1	76441045	2677
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230253	retained_intron		15	-1	102179861	593
ENSMUSG00000047988	protein_coding	4933428G20Rik	ENSMUST00000056955	protein_coding	principal1	11	-1	97500340	1425
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000231048	nonsense_mediated_decay		15	-1	102188674	1309
ENSMUSG00000097910	lincRNA	5033428I22Rik	ENSMUST00000181638	lincRNA		8	1	57332118	2040
ENSMUSG00000097910	lincRNA	5033428I22Rik	ENSMUST00000209896	lincRNA		8	1	57332435	2664
ENSMUSG00000038756	protein_coding	Ttll6	ENSMUST00000107680	protein_coding	alternative2	11	1	96134219	3485
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000160806	retained_intron		15	1	76449655	843
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230708	nonsense_mediated_decay		15	-1	102187599	772
ENSMUSG00000033253	protein_coding	Szt2	ENSMUST00000183402	nonsense_mediated_decay		4	-1	118374274	3652
ENSMUSG00000112722	lincRNA	Gm3942	ENSMUST00000218495	lincRNA		10	1	112837752	666
ENSMUSG00000028809	protein_coding	Srrm1	ENSMUST00000134019	processed_transcript		4	-1	135353202	1073
ENSMUSG00000026708	protein_coding	Cenpl	ENSMUST00000111620	protein_coding	principal1	1	1	161070767	1910
ENSMUSG00000097910	lincRNA	5033428I22Rik	ENSMUST00000210614	lincRNA		8	1	57332435	952
ENSMUSG00000097910	lincRNA	5033428I22Rik	ENSMUST00000210633	lincRNA		8	1	57340800	6652
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000160525	retained_intron		15	1	76450628	620
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000154362	retained_intron		11	1	80209113	2954
ENSMUSG00000109629	lincRNA	Gm34099	ENSMUST00000211592	lincRNA		8	1	57403104	704
ENSMUSG00000021786	protein_coding	Oxsm	ENSMUST00000022311	protein_coding	principal1	14	-1	16249808	3759
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230342	nonsense_mediated_decay		15	-1	102188097	465
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000161352	retained_intron		15	1	76451814	488
ENSMUSG00000024998	protein_coding	Plce1	ENSMUST00000182481	protein_coding	principal2	19	1	38481121	8357
ENSMUSG00000033253	protein_coding	Szt2	ENSMUST00000130058	processed_transcript		4	-1	118365066	599
ENSMUSG00000026708	protein_coding	Cenpl	ENSMUST00000111618	protein_coding	principal1	1	1	161070767	1996
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000125651	retained_intron		11	1	54100963	3060
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000161265	nonsense_mediated_decay		15	1	76452139	388
ENSMUSG00000033253	protein_coding	Szt2	ENSMUST00000138632	retained_intron		4	-1	118369639	605
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000019050	protein_coding	principal3	11	1	54100963	2230
ENSMUSG00000082882	protein_coding	Olfr1186	ENSMUST00000216978	protein_coding	principal1	2	1	88518551	1745
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000229938	nonsense_mediated_decay		15	-1	102188674	495
ENSMUSG00000097185	TEC	Gm26596	ENSMUST00000180464	TEC		10	1	112928501	2655
ENSMUSG00000033253	protein_coding	Szt2	ENSMUST00000138386	retained_intron		4	-1	118373825	791
ENSMUSG00000082882	protein_coding	Olfr1186	ENSMUST00000215912	protein_coding	principal1	2	1	88518555	1850
ENSMUSG00000047656	protein_coding	Trpt1	ENSMUST00000088223	protein_coding	principal1	19	1	6996172	1103
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000161350	retained_intron		15	1	76452154	474
ENSMUSG00000022558	protein_coding	Mroh1	ENSMUST00000092595	protein_coding	alternative2	15	1	76390031	5111
ENSMUSG00000033253	protein_coding	Szt2	ENSMUST00000136737	processed_transcript		4	-1	118389933	444
ENSMUSG00000031610	protein_coding	Scrg1	ENSMUST00000034023	protein_coding	principal1	8	1	57455923	700
ENSMUSG00000021786	protein_coding	Oxsm	ENSMUST00000112625	protein_coding	principal1	14	-1	16243331	3434
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000017831	protein_coding	alternative1	11	1	80209119	3029
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000135596	retained_intron		11	1	54100975	610
ENSMUSG00000082882	protein_coding	Olfr1186	ENSMUST00000121619	protein_coding	principal1	2	1	88525501	1090
ENSMUSG00000071266	protein_coding	Zfp946	ENSMUST00000141831	processed_transcript		17	1	22424222	913
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000174616	protein_coding	alternative1	11	1	54100975	2094
ENSMUSG00000024998	protein_coding	Plce1	ENSMUST00000169713	protein_coding	principal2	19	1	38524197	9439
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000129499	protein_coding		11	1	54100980	352
ENSMUSG00000074748	protein_coding	Atxn7l3b	ENSMUST00000099276	protein_coding	principal1	10	-1	112928995	3566
ENSMUSG00000025280	protein_coding	Polr3a	ENSMUST00000026322	protein_coding	principal1	14	-1	24487052	4687
ENSMUSG00000026708	protein_coding	Cenpl	ENSMUST00000192850	nonsense_mediated_decay		1	1	161070892	1914
ENSMUSG00000021786	protein_coding	Oxsm	ENSMUST00000112624	protein_coding	principal1	14	-1	16249174	1586
ENSMUSG00000068810	unprocessed_pseudogene	Olfr1187-ps1	ENSMUST00000177576	unprocessed_pseudogene		2	-1	88540447	334
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000126840	protein_coding		11	1	54100991	559
ENSMUSG00000095646	TR_V_gene	Trav10n	ENSMUST00000103612	TR_V_gene	principal1	14	1	53122114	343
ENSMUSG00000060679	protein_coding	Mrps9	ENSMUST00000185376	processed_transcript		1	1	42851276	2088
ENSMUSG00000089659	processed_pseudogene	Gm3470	ENSMUST00000160819	processed_pseudogene		5	-1	99022222	420
ENSMUSG00000024998	protein_coding	Plce1	ENSMUST00000182267	protein_coding	alternative2	19	1	38524209	7234
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000125132	nonsense_mediated_decay		11	1	54101068	721
ENSMUSG00000074748	protein_coding	Atxn7l3b	ENSMUST00000165438	processed_transcript		10	-1	112929001	458
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000134148	retained_intron		11	1	80209147	1326
ENSMUSG00000060679	protein_coding	Mrps9	ENSMUST00000185523	processed_transcript		1	1	42851276	1867
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000135653	protein_coding		11	1	54101245	758
ENSMUSG00000071266	protein_coding	Zfp946	ENSMUST00000120222	protein_coding	principal1	17	1	22424259	2926
ENSMUSG00000060679	protein_coding	Mrps9	ENSMUST00000188174	retained_intron		1	1	42851285	2421
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000138477	protein_coding		11	1	54107320	539
ENSMUSG00000024998	protein_coding	Plce1	ENSMUST00000182999	protein_coding		19	1	38583368	619
ENSMUSG00000060679	protein_coding	Mrps9	ENSMUST00000187414	retained_intron		1	1	42862514	1142
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000134894	protein_coding		11	1	80242611	2188
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000141258	nonsense_mediated_decay		11	1	54111021	1052
ENSMUSG00000021786	protein_coding	Oxsm	ENSMUST00000148121	processed_transcript		14	-1	16243287	800
ENSMUSG00000071266	protein_coding	Zfp946	ENSMUST00000088763	protein_coding	principal1	17	1	22424268	2935
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000155299	processed_transcript		11	1	54113203	265
ENSMUSG00000026708	protein_coding	Cenpl	ENSMUST00000192150	nonsense_mediated_decay		1	1	161070950	1756
ENSMUSG00000114842	TEC	Gm47797	ENSMUST00000224181	TEC		14	1	16273995	327
ENSMUSG00000071266	protein_coding	Zfp946	ENSMUST00000167740	protein_coding	principal1	17	1	22451123	1572
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000122041	protein_coding	principal2	13	1	108654177	2554
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000142583	retained_intron		11	1	54124673	455
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000135947	processed_transcript		11	1	80249674	2192
ENSMUSG00000116821	processed_pseudogene	Gm8538	ENSMUST00000232393	processed_pseudogene		16	1	36735587	1524
ENSMUSG00000018906	protein_coding	P4ha2	ENSMUST00000139315	retained_intron		11	1	54127693	1997
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000129374	processed_transcript		13	1	109116236	2397
ENSMUSG00000025280	protein_coding	Polr3a	ENSMUST00000223718	nonsense_mediated_decay		14	-1	24487009	4835
ENSMUSG00000117058	processed_pseudogene	Gm49955	ENSMUST00000233425	processed_pseudogene		17	-1	22486376	150
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000151518	retained_intron		11	1	80252497	759
ENSMUSG00000026708	protein_coding	Cenpl	ENSMUST00000143486	nonsense_mediated_decay		1	1	161070966	1997
ENSMUSG00000044306	antisense	4930500M09Rik	ENSMUST00000194988	antisense		1	1	170214860	1563
ENSMUSG00000108160	processed_pseudogene	Gm19237	ENSMUST00000205036	processed_pseudogene		6	1	62582070	1132
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000094578	protein_coding	principal2	5	-1	100416234	4228
ENSMUSG00000044306	antisense	4930500M09Rik	ENSMUST00000159201	antisense		1	1	170214860	697
ENSMUSG00000025280	protein_coding	Polr3a	ENSMUST00000223848	retained_intron		14	-1	24451215	653
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000093791	protein_coding		9	-1	102626124	2696
ENSMUSG00000060679	protein_coding	Mrps9	ENSMUST00000201108	nonsense_mediated_decay		1	1	42887737	1009
ENSMUSG00000000028	protein_coding	Cdc45	ENSMUST00000000028	protein_coding	principal1	16	-1	18811972	2143
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000237515	protein_coding		11	1	80254701	825
ENSMUSG00000026708	protein_coding	Cenpl	ENSMUST00000194855	nonsense_mediated_decay		1	1	161070985	1504
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000236882	retained_intron		11	1	80264051	1347
ENSMUSG00000034028	protein_coding	Cd226	ENSMUST00000235651	nonsense_mediated_decay		18	1	89176967	2456
ENSMUSG00000026708	protein_coding	Cenpl	ENSMUST00000195571	nonsense_mediated_decay		1	1	161071016	4341
ENSMUSG00000105430	antisense	Gm43301	ENSMUST00000198918	antisense		5	1	122581469	778
ENSMUSG00000034028	protein_coding	Cd226	ENSMUST00000236644	protein_coding		18	1	89177028	446
ENSMUSG00000112759	TEC	Gm47615	ENSMUST00000217955	TEC		10	1	63270090	779
ENSMUSG00000032041	protein_coding	Tirap	ENSMUST00000175765	protein_coding	principal1	9	-1	35200291	4589
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000182433	protein_coding		5	-1	100373484	1195
ENSMUSG00000025280	protein_coding	Polr3a	ENSMUST00000225526	retained_intron		14	-1	24479425	893
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000191074	retained_intron		9	-1	102587170	484
ENSMUSG00000060679	protein_coding	Mrps9	ENSMUST00000202358	retained_intron		1	1	42903057	687
ENSMUSG00000026708	protein_coding	Cenpl	ENSMUST00000195212	processed_transcript		1	1	161072405	589
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000216281	protein_coding		9	-1	102625981	1791
ENSMUSG00000096991	antisense	Gm26789	ENSMUST00000181342	antisense		10	-1	63295793	2502
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000182886	protein_coding	alternative2	5	-1	100416175	4047
ENSMUSG00000025280	protein_coding	Polr3a	ENSMUST00000225014	retained_intron		14	-1	24487058	775
ENSMUSG00000108670	TEC	Gm44815	ENSMUST00000206812	TEC		7	-1	78923886	1633
ENSMUSG00000112411	TEC	Gm19337	ENSMUST00000218100	TEC		10	1	63250932	1584
ENSMUSG00000017686	protein_coding	Rhot1	ENSMUST00000055056	protein_coding	alternative1	11	1	80209055	4260
ENSMUSG00000026708	protein_coding	Cenpl	ENSMUST00000155808	processed_transcript		1	1	161076025	802
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000162960	retained_intron		9	-1	102621964	5861
ENSMUSG00000103947	TEC	Gm37345	ENSMUST00000193062	TEC		3	1	45445669	3138
ENSMUSG00000000028	protein_coding	Cdc45	ENSMUST00000096990	protein_coding		16	-1	18811626	1747
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000219856	retained_intron		10	1	63243810	653
ENSMUSG00000024998	protein_coding	Plce1	ENSMUST00000182589	retained_intron		19	1	38722370	6769
ENSMUSG00000103534	processed_pseudogene	Gm37835	ENSMUST00000193305	processed_pseudogene		3	-1	45690904	361
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000182988	protein_coding		5	-1	100395901	2846
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000160512	retained_intron		9	-1	102602750	538
ENSMUSG00000024998	protein_coding	Plce1	ENSMUST00000183131	retained_intron		19	1	38734914	4220
ENSMUSG00000084416	processed_pseudogene	Rpl10a-ps1	ENSMUST00000120360	processed_pseudogene		1	-1	64994604	654
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000182664	retained_intron		5	-1	100364270	600
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000215253	protein_coding		9	-1	102618848	542
ENSMUSG00000117935	processed_pseudogene	Gm8717	ENSMUST00000237606	processed_pseudogene		19	-1	38704324	814
ENSMUSG00000101079	antisense	Gm28991	ENSMUST00000186584	antisense		19	-1	38752645	543
ENSMUSG00000097441	antisense	Gm26633	ENSMUST00000180546	antisense		7	-1	79053323	3256
ENSMUSG00000113584	lincRNA	Gm46355	ENSMUST00000221434	lincRNA		12	-1	70912151	1671
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000182812	protein_coding		5	-1	100382847	1093
ENSMUSG00000000028	protein_coding	Cdc45	ENSMUST00000115585	protein_coding		16	-1	18811987	832
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000213636	protein_coding		9	-1	102626519	796
ENSMUSG00000000028	protein_coding	Cdc45	ENSMUST00000231819	retained_intron		16	-1	18811591	1484
ENSMUSG00000113707	lincRNA	Gm10457	ENSMUST00000222619	lincRNA		12	1	70912259	1906
ENSMUSG00000115383	sense_overlapping	Gm49216	ENSMUST00000227757	sense_overlapping		15	-1	31486929	513
ENSMUSG00000080933	protein_coding	Rhox3g	ENSMUST00000119965	protein_coding	principal1	X	-1	37628612	991
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000182002	protein_coding		5	-1	100378999	887
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000159100	nonsense_mediated_decay		9	-1	102626023	517
ENSMUSG00000118428	unitary_pseudogene	Gm5038	ENSMUST00000238359	unitary_pseudogene		11	-1	58231450	971
ENSMUSG00000080241	transcribed_processed_pseudogene	Dppa3-ps	ENSMUST00000116499	transcribed_processed_pseudogene		X	-1	37626097	451
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000138938	retained_intron		13	1	109116359	1864
ENSMUSG00000083080	processed_pseudogene	Gm11484	ENSMUST00000119808	processed_pseudogene		4	1	66353849	338
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000183247	protein_coding		5	-1	100392613	744
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000120671	protein_coding		13	1	109116641	2455
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000161645	protein_coding		9	-1	102626509	536
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000219230	retained_intron		10	1	63243829	3591
ENSMUSG00000032534	protein_coding	Cep63	ENSMUST00000162297	protein_coding		9	-1	102626509	519
ENSMUSG00000086557	lincRNA	Gm15999	ENSMUST00000127317	lincRNA		3	-1	97901089	1511
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000168822	processed_transcript		16	1	18811779	241
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000182850	processed_transcript		5	-1	100405571	683
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000182171	retained_intron		5	-1	100409612	1931
ENSMUSG00000035325	protein_coding	Sec31a	ENSMUST00000182144	retained_intron		5	-1	100416166	756
ENSMUSG00000099491	lincRNA	4930533D04Rik	ENSMUST00000185478	lincRNA		9	1	102692885	788
ENSMUSG00000032041	protein_coding	Tirap	ENSMUST00000176531	protein_coding	principal1	9	-1	35199928	2310
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000153234	protein_coding		13	1	109260654	2284
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000232311	processed_transcript		16	1	18811824	616
ENSMUSG00000102200	TEC	Gm36957	ENSMUST00000192982	TEC		9	-1	102701002	2824
ENSMUSG00000079629	protein_coding	Rhox2g	ENSMUST00000183888	protein_coding		X	-1	37643046	489
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000119507	protein_coding		13	1	109442183	2163
ENSMUSG00000032041	protein_coding	Tirap	ENSMUST00000177129	protein_coding	principal1	9	-1	35199988	2366
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000079975	protein_coding	alternative1	13	1	109581405	2280
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000135275	protein_coding		13	1	109632780	2123
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000074103	protein_coding	alternative1	13	1	109686156	2167
ENSMUSG00000032041	protein_coding	Tirap	ENSMUST00000176685	protein_coding	principal1	9	-1	35199970	1783
ENSMUSG00000032041	protein_coding	Tirap	ENSMUST00000176021	protein_coding		9	-1	35199883	938
ENSMUSG00000020087	protein_coding	Tysnd1	ENSMUST00000020284	protein_coding	principal1	10	1	61695514	2286
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000147213	protein_coding		6	1	58584523	464
ENSMUSG00000021101	lincRNA	4930408O17Rik	ENSMUST00000222624	lincRNA		12	1	104857371	1131
ENSMUSG00000032041	protein_coding	Tirap	ENSMUST00000176611	protein_coding		9	-1	35191400	509
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000204924	processed_transcript		6	1	58584527	943
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000134973	retained_intron		13	1	109686176	1156
ENSMUSG00000020087	protein_coding	Tysnd1	ENSMUST00000218135	protein_coding		10	1	61696393	595
ENSMUSG00000032041	protein_coding	Tirap	ENSMUST00000177052	protein_coding		9	-1	35199499	604
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000148008	protein_coding		6	1	58595975	348
ENSMUSG00000021101	lincRNA	4930408O17Rik	ENSMUST00000021520	lincRNA		12	1	104865330	621
ENSMUSG00000020087	protein_coding	Tysnd1	ENSMUST00000219768	protein_coding		10	1	61696647	306
ENSMUSG00000079629	protein_coding	Rhox2g	ENSMUST00000115169	protein_coding	principal1	X	-1	37643470	795
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000152630	processed_transcript		13	1	109757221	524
ENSMUSG00000020087	protein_coding	Tysnd1	ENSMUST00000218280	protein_coding		10	1	61696710	512
ENSMUSG00000051675	protein_coding	Trim32	ENSMUST00000050850	protein_coding	principal1	4	1	65604986	3194
ENSMUSG00000024965	protein_coding	Fermt3	ENSMUST00000040772	protein_coding	principal1	19	-1	7019469	2587
ENSMUSG00000051675	protein_coding	Trim32	ENSMUST00000107366	protein_coding	principal1	4	1	65604986	3191
ENSMUSG00000116021	TEC	Gm49474	ENSMUST00000230449	TEC		15	-1	100091757	1867
ENSMUSG00000069873	protein_coding	4930438A08Rik	ENSMUST00000108834	protein_coding	principal1	11	1	58274799	2093
ENSMUSG00000069873	protein_coding	4930438A08Rik	ENSMUST00000208022	protein_coding		11	1	58275060	918
ENSMUSG00000024965	protein_coding	Fermt3	ENSMUST00000237888	nonsense_mediated_decay		19	-1	7019430	2856
ENSMUSG00000051675	protein_coding	Trim32	ENSMUST00000155978	protein_coding		4	1	65605249	516
ENSMUSG00000116366	antisense	Gm49475	ENSMUST00000229080	antisense		15	-1	100195311	458
ENSMUSG00000051675	protein_coding	Trim32	ENSMUST00000156922	protein_coding		4	1	65605249	660
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000023491	protein_coding	principal3	16	1	32914100	5536
ENSMUSG00000024965	protein_coding	Fermt3	ENSMUST00000237960	nonsense_mediated_decay		19	-1	7019399	2988
ENSMUSG00000024965	protein_coding	Fermt3	ENSMUST00000236188	protein_coding		19	-1	7019362	379
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000028320	protein_coding		2	-1	52223737	10298
ENSMUSG00000024965	protein_coding	Fermt3	ENSMUST00000238171	retained_intron		19	-1	7019345	2947
ENSMUSG00000074766	protein_coding	Ism1	ENSMUST00000184404	protein_coding	principal1	2	1	139678178	2964
ENSMUSG00000109810	TEC	Gm45592	ENSMUST00000209605	TEC		8	1	11637282	1043
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000170899	protein_coding	alternative2	16	1	32914122	2752
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000170201	protein_coding	alternative2	16	1	32914122	2902
ENSMUSG00000074766	protein_coding	Ism1	ENSMUST00000099307	protein_coding		2	1	139678178	2944
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000119672	nonsense_mediated_decay		13	1	109903102	2051
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230687	protein_coding		15	-1	102204245	825
ENSMUSG00000087603	antisense	Gm11339	ENSMUST00000154766	antisense		13	1	23956809	490
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000120664	protein_coding		13	1	109903106	4207
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000151429	retained_intron		13	1	109922911	757
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000156928	retained_intron		16	1	32914123	2165
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000117879	protein_coding		13	1	109925063	1724
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000155716	nonsense_mediated_decay		1	-1	75210778	2927
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000164486	nonsense_mediated_decay		16	1	32914127	675
ENSMUSG00000025955	protein_coding	Akr1cl	ENSMUST00000162800	protein_coding	alternative2	1	-1	65032747	1628
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000185449	retained_intron		1	-1	75201172	2082
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000165616	protein_coding		16	1	32914142	1875
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000117420	protein_coding		13	1	109926844	1955
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000155459	protein_coding		13	1	109935312	714
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000135193	protein_coding	alternative2	16	1	32914142	2794
ENSMUSG00000021699	protein_coding	Pde4d	ENSMUST00000177907	protein_coding	principal2	13	1	108860166	2244
ENSMUSG00000034028	protein_coding	Cd226	ENSMUST00000236828	protein_coding	principal1	18	1	89177028	4494
ENSMUSG00000059751	processed_pseudogene	Rps3a3	ENSMUST00000074680	processed_pseudogene		13	1	108670603	795
ENSMUSG00000041258	protein_coding	Zfp236	ENSMUST00000171071	protein_coding	principal2	18	-1	82692883	9626
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000133399	processed_transcript		16	1	32954698	589
ENSMUSG00000025979	protein_coding	Mob4	ENSMUST00000159311	protein_coding		1	1	55131231	1816
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000163428	protein_coding		16	1	32979397	793
ENSMUSG00000034028	protein_coding	Cd226	ENSMUST00000237110	protein_coding		18	1	89197330	408
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000113623	protein_coding	principal1	1	-1	75210778	2339
ENSMUSG00000079628	protein_coding	Rhox4g	ENSMUST00000115166	protein_coding	principal1	X	-1	37651327	979
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000165826	protein_coding		16	1	32979425	749
ENSMUSG00000021785	protein_coding	Ngly1	ENSMUST00000022310	protein_coding	principal2	14	1	16249280	2935
ENSMUSG00000022801	protein_coding	Lrch3	ENSMUST00000142290	protein_coding		16	1	32986003	759
ENSMUSG00000026667	protein_coding	Uhmk1	ENSMUST00000150821	protein_coding		1	-1	170214734	7676
ENSMUSG00000033792	protein_coding	Atp7a	ENSMUST00000055941	protein_coding	alternative2	X	1	106027322	4866
ENSMUSG00000079628	protein_coding	Rhox4g	ENSMUST00000184625	retained_intron		X	-1	37651136	1841
ENSMUSG00000021785	protein_coding	Ngly1	ENSMUST00000224154	protein_coding		14	1	16249327	373
ENSMUSG00000041258	protein_coding	Zfp236	ENSMUST00000183324	nonsense_mediated_decay		18	-1	82617750	3227
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000115578	protein_coding	principal1	16	1	18811832	2078
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000164795	processed_transcript		16	1	18812294	323
ENSMUSG00000021785	protein_coding	Ngly1	ENSMUST00000153109	retained_intron		14	1	16249327	3296
ENSMUSG00000021785	protein_coding	Ngly1	ENSMUST00000224656	protein_coding	alternative2	14	1	16249327	2329
ENSMUSG00000026667	protein_coding	Uhmk1	ENSMUST00000027979	protein_coding	principal1	1	-1	170215397	7864
ENSMUSG00000021785	protein_coding	Ngly1	ENSMUST00000226089	retained_intron		14	1	16260562	750
ENSMUSG00000041258	protein_coding	Zfp236	ENSMUST00000182122	protein_coding	alternative2	18	-1	82692734	6059
ENSMUSG00000030866	protein_coding	Ern2	ENSMUST00000206198	nonsense_mediated_decay		7	-1	122186207	2957
ENSMUSG00000026667	protein_coding	Uhmk1	ENSMUST00000123399	protein_coding		1	-1	170215397	7775
ENSMUSG00000021785	protein_coding	Ngly1	ENSMUST00000223973	protein_coding		14	1	16260621	753
ENSMUSG00000025955	protein_coding	Akr1cl	ENSMUST00000069142	protein_coding	principal3	1	-1	65032759	1761
ENSMUSG00000041406	protein_coding	BC055324	ENSMUST00000097493	protein_coding	alternative2	1	-1	163994796	3217
ENSMUSG00000021785	protein_coding	Ngly1	ENSMUST00000223879	retained_intron		14	1	16268541	2417
ENSMUSG00000033792	protein_coding	Atp7a	ENSMUST00000113557	protein_coding	principal3	X	1	106027276	4900
ENSMUSG00000034028	protein_coding	Cd226	ENSMUST00000097496	protein_coding		18	1	89197482	1239
ENSMUSG00000021785	protein_coding	Ngly1	ENSMUST00000143947	retained_intron		14	1	16280977	969
ENSMUSG00000114253	sense_intronic	Gm47798	ENSMUST00000224494	sense_intronic		14	1	16304511	3815
ENSMUSG00000076802	TR_V_gene	Trav6n-6	ENSMUST00000181793	TR_V_gene		14	1	53132679	365
ENSMUSG00000025955	protein_coding	Akr1cl	ENSMUST00000159896	retained_intron		1	-1	65016543	767
ENSMUSG00000076802	TR_V_gene	Trav6n-6	ENSMUST00000103613	TR_V_gene	principal1	14	1	53132851	287
ENSMUSG00000033792	protein_coding	Atp7a	ENSMUST00000133875	retained_intron		X	1	106115237	4218
ENSMUSG00000041406	protein_coding	BC055324	ENSMUST00000045876	protein_coding	principal2	1	-1	163994796	3179
ENSMUSG00000114907	antisense	Gm47794	ENSMUST00000225889	antisense		14	1	16243351	1741
ENSMUSG00000025955	protein_coding	Akr1cl	ENSMUST00000159566	nonsense_mediated_decay		1	-1	65032686	969
ENSMUSG00000041258	protein_coding	Zfp236	ENSMUST00000183048	nonsense_mediated_decay		18	-1	82692734	6170
ENSMUSG00000034028	protein_coding	Cd226	ENSMUST00000237979	nonsense_mediated_decay		18	1	89197482	1364
ENSMUSG00000025979	protein_coding	Mob4	ENSMUST00000162364	protein_coding	principal1	1	1	55131231	2840
ENSMUSG00000041258	protein_coding	Zfp236	ENSMUST00000182759	retained_intron		18	-1	82640217	665
ENSMUSG00000106259	TR_V_pseudogene	Trav11n	ENSMUST00000200113	TR_V_pseudogene		14	1	53135122	343
ENSMUSG00000025955	protein_coding	Akr1cl	ENSMUST00000161313	processed_transcript		1	-1	65032732	1157
ENSMUSG00000041258	protein_coding	Zfp236	ENSMUST00000182866	protein_coding		18	-1	82691799	1503
ENSMUSG00000034028	protein_coding	Cd226	ENSMUST00000236450	retained_intron		18	1	89197498	592
ENSMUSG00000041258	protein_coding	Zfp236	ENSMUST00000225002	processed_transcript		18	-1	82683568	156
ENSMUSG00000025955	protein_coding	Akr1cl	ENSMUST00000160283	retained_intron		1	-1	65032748	1325
ENSMUSG00000090042	processed_pseudogene	Gm8550	ENSMUST00000161621	processed_pseudogene		1	1	65028080	653
ENSMUSG00000105629	TR_V_gene	Trav7n-5	ENSMUST00000199753	TR_V_gene	principal1	14	1	53146919	340
ENSMUSG00000118160	unprocessed_pseudogene	Gm50347	ENSMUST00000237388	unprocessed_pseudogene		18	1	82651053	824
ENSMUSG00000034028	protein_coding	Cd226	ENSMUST00000236452	protein_coding		18	1	89197595	742
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000189663	nonsense_mediated_decay		1	-1	75202890	1279
ENSMUSG00000033792	protein_coding	Atp7a	ENSMUST00000134363	processed_transcript		X	1	106106932	674
ENSMUSG00000097141	TEC	Gm10524	ENSMUST00000181931	TEC		18	1	82692284	1893
ENSMUSG00000030866	protein_coding	Ern2	ENSMUST00000033153	protein_coding	principal1	7	-1	122186204	2914
ENSMUSG00000041406	protein_coding	BC055324	ENSMUST00000159617	nonsense_mediated_decay		1	-1	163962023	605
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000186173	protein_coding		1	-1	75209423	1657
ENSMUSG00000034028	protein_coding	Cd226	ENSMUST00000236835	protein_coding		18	1	89206101	451
ENSMUSG00000041406	protein_coding	BC055324	ENSMUST00000161321	retained_intron		1	-1	163972319	705
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000172013	nonsense_mediated_decay		16	1	18812301	934
ENSMUSG00000112807	TEC	Gm47519	ENSMUST00000219465	TEC		10	1	112960188	1603
ENSMUSG00000033777	protein_coding	Tlr13	ENSMUST00000139380	retained_intron		X	1	106143204	337
ENSMUSG00000028896	protein_coding	Rcc1	ENSMUST00000084250	protein_coding	principal1	4	-1	132345747	2285
ENSMUSG00000041406	protein_coding	BC055324	ENSMUST00000160926	nonsense_mediated_decay		1	-1	163994764	531
ENSMUSG00000034028	protein_coding	Cd226	ENSMUST00000037142	protein_coding	principal1	18	1	89197427	2487
ENSMUSG00000111979	TEC	Gm47522	ENSMUST00000219265	TEC		10	1	113025501	2722
ENSMUSG00000025979	protein_coding	Mob4	ENSMUST00000162930	retained_intron		1	1	55131260	3555
ENSMUSG00000115560	antisense	Gm49191	ENSMUST00000226326	antisense		15	-1	23414457	511
ENSMUSG00000041406	protein_coding	BC055324	ENSMUST00000162949	processed_transcript		1	-1	163994541	343
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000171789	nonsense_mediated_decay		16	1	18812321	775
ENSMUSG00000025979	protein_coding	Mob4	ENSMUST00000027122	protein_coding		1	1	55131282	745
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000132507	retained_intron		1	-1	75209494	2031
ENSMUSG00000027879	protein_coding	Sec22b	ENSMUST00000029476	protein_coding	principal1	3	1	97901190	2810
ENSMUSG00000021927	processed_pseudogene	Hnrnpa1l2-ps2	ENSMUST00000022493	processed_pseudogene		15	-1	22714830	963
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000163695	nonsense_mediated_decay		16	1	18812356	646
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000154691	nonsense_mediated_decay		9	-1	35210936	2212
ENSMUSG00000087410	lincRNA	2310065F04Rik	ENSMUST00000125538	lincRNA		11	-1	67120080	2724
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000143193	retained_intron		1	-1	75201248	471
ENSMUSG00000025979	protein_coding	Mob4	ENSMUST00000161122	nonsense_mediated_decay		1	1	55131287	1143
ENSMUSG00000002012	protein_coding	Pnck	ENSMUST00000114473	protein_coding	principal1	X	-1	73659724	1492
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000146713	retained_intron		1	-1	75202295	636
ENSMUSG00000028896	protein_coding	Rcc1	ENSMUST00000030726	protein_coding		4	-1	132345705	2278
ENSMUSG00000091194	processed_pseudogene	Gm19840	ENSMUST00000169624	processed_pseudogene		15	1	22935487	882
ENSMUSG00000027879	protein_coding	Sec22b	ENSMUST00000130778	nonsense_mediated_decay		3	1	97901216	1355
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000153584	retained_intron		1	-1	75201823	507
ENSMUSG00000087410	lincRNA	2310065F04Rik	ENSMUST00000153497	lincRNA		11	-1	67116841	1049
ENSMUSG00000025979	protein_coding	Mob4	ENSMUST00000162553	protein_coding		1	1	55131320	901
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000166352	retained_intron		16	1	18823226	1158
ENSMUSG00000109492	processed_pseudogene	Gm33882	ENSMUST00000208990	processed_pseudogene		7	1	99090232	651
ENSMUSG00000022802	protein_coding	Lmln	ENSMUST00000023497	protein_coding	principal1	16	1	33062521	6147
ENSMUSG00000033777	protein_coding	Tlr13	ENSMUST00000040065	protein_coding	principal1	X	1	106143229	4060
ENSMUSG00000027879	protein_coding	Sec22b	ENSMUST00000130620	protein_coding		3	1	97901225	640
ENSMUSG00000025979	protein_coding	Mob4	ENSMUST00000159743	retained_intron		1	1	55131326	357
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000130072	retained_intron		9	-1	35210954	2767
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000172451	protein_coding		16	1	18827061	866
ENSMUSG00000002012	protein_coding	Pnck	ENSMUST00000002087	protein_coding	principal1	X	-1	73659828	1536
ENSMUSG00000109130	antisense	Gm45187	ENSMUST00000209090	antisense		7	1	98904268	2531
ENSMUSG00000025979	protein_coding	Mob4	ENSMUST00000187422	retained_intron		1	1	55147630	888
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000143039	retained_intron		9	-1	35210970	3260
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000170325	retained_intron		16	1	18827249	638
ENSMUSG00000027879	protein_coding	Sec22b	ENSMUST00000122288	protein_coding		3	1	97901227	1177
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000185448	protein_coding		1	-1	75210813	684
ENSMUSG00000028896	protein_coding	Rcc1	ENSMUST00000105951	protein_coding	principal1	4	-1	132351636	2326
ENSMUSG00000109130	antisense	Gm45187	ENSMUST00000207697	antisense		7	1	98905087	2760
ENSMUSG00000039100	protein_coding	Marchf6	ENSMUST00000090227	protein_coding	principal1	15	-1	31531053	6260
ENSMUSG00000081081	processed_pseudogene	Gm14856	ENSMUST00000121548	processed_pseudogene		X	1	106176314	613
ENSMUSG00000026200	protein_coding	Glb1l	ENSMUST00000131408	retained_intron		1	-1	75210753	2258
ENSMUSG00000027879	protein_coding	Sec22b	ENSMUST00000199738	processed_transcript		3	1	97906954	711
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000229043	protein_coding		15	-1	102203412	1061
ENSMUSG00000028896	protein_coding	Rcc1	ENSMUST00000155194	processed_transcript		4	-1	132339932	451
ENSMUSG00000109282	antisense	Gm45188	ENSMUST00000207592	antisense		7	1	98895930	1369
ENSMUSG00000028896	protein_coding	Rcc1	ENSMUST00000155129	protein_coding		4	-1	132353605	507
ENSMUSG00000022802	protein_coding	Lmln	ENSMUST00000153549	retained_intron		16	1	33091286	362
ENSMUSG00000005262	protein_coding	Ufd1	ENSMUST00000005394	protein_coding	principal1	16	1	18812294	1996
ENSMUSG00000039100	protein_coding	Marchf6	ENSMUST00000226868	retained_intron		15	-1	31471991	736
ENSMUSG00000039100	protein_coding	Marchf6	ENSMUST00000226207	retained_intron		15	-1	31504554	2669
ENSMUSG00000020277	protein_coding	Pfkl	ENSMUST00000020522	protein_coding	principal1	10	-1	78009807	3730
ENSMUSG00000022802	protein_coding	Lmln	ENSMUST00000140504	retained_intron		16	1	33116678	887
ENSMUSG00000022802	protein_coding	Lmln	ENSMUST00000155920	processed_transcript		16	1	33124228	660
ENSMUSG00000039100	protein_coding	Marchf6	ENSMUST00000228122	processed_transcript		15	-1	31531053	662
ENSMUSG00000020277	protein_coding	Pfkl	ENSMUST00000149271	retained_intron		10	-1	77992176	611
ENSMUSG00000115357	processed_pseudogene	Gm49214	ENSMUST00000227135	processed_pseudogene		15	1	31462281	351
ENSMUSG00000021337	protein_coding	Scgn	ENSMUST00000021770	protein_coding	principal1	13	-1	23991214	1412
ENSMUSG00000002012	protein_coding	Pnck	ENSMUST00000114472	protein_coding	principal1	X	-1	73660117	1532
ENSMUSG00000115224	processed_pseudogene	Gm49215	ENSMUST00000226633	processed_pseudogene		15	-1	31521273	350
ENSMUSG00000052407	protein_coding	Ccdc171	ENSMUST00000053414	protein_coding	alternative2	4	1	83525545	4525
ENSMUSG00000023120	protein_coding	Ldc1	ENSMUST00000124528	processed_transcript		4	-1	130209856	335
ENSMUSG00000113200	TEC	Gm48632	ENSMUST00000221105	TEC		12	1	111091200	2742
ENSMUSG00000028896	protein_coding	Rcc1	ENSMUST00000131307	retained_intron		4	-1	132345701	665
ENSMUSG00000011118	protein_coding	Panx3	ENSMUST00000011262	protein_coding	principal1	9	-1	37669235	2531
ENSMUSG00000115742	TEC	Gm48950	ENSMUST00000228396	TEC		14	-1	49738009	1352
ENSMUSG00000052407	protein_coding	Ccdc171	ENSMUST00000231339	protein_coding	principal5	4	1	83525545	4549
ENSMUSG00000082967	processed_pseudogene	Gm16082	ENSMUST00000115992	processed_pseudogene		14	-1	49713622	377
ENSMUSG00000021337	protein_coding	Scgn	ENSMUST00000226031	processed_transcript		13	-1	23955579	245
ENSMUSG00000086337	lincRNA	Gm11535	ENSMUST00000145517	lincRNA		11	1	96177551	778
ENSMUSG00000028896	protein_coding	Rcc1	ENSMUST00000137238	retained_intron		4	-1	132345357	715
ENSMUSG00000117094	processed_pseudogene	Gm49956	ENSMUST00000233970	processed_pseudogene		17	1	22486555	196
ENSMUSG00000115228	TEC	Gm48948	ENSMUST00000226894	TEC		14	-1	49748193	943
ENSMUSG00000021337	protein_coding	Scgn	ENSMUST00000142826	protein_coding		13	-1	23967176	470
ENSMUSG00000052407	protein_coding	Ccdc171	ENSMUST00000126429	protein_coding	alternative2	4	1	83525614	1388
ENSMUSG00000099519	processed_transcript	Gm29253	ENSMUST00000185727	processed_transcript		1	-1	75185146	5231
ENSMUSG00000028896	protein_coding	Rcc1	ENSMUST00000156710	retained_intron		4	-1	132345692	563
ENSMUSG00000117259	processed_pseudogene	Gm19012	ENSMUST00000232727	processed_pseudogene		17	1	22494622	787
ENSMUSG00000011118	protein_coding	Panx3	ENSMUST00000142228	nonsense_mediated_decay		9	-1	37669173	603
ENSMUSG00000110041	unprocessed_pseudogene	Olfr673-ps1	ENSMUST00000210859	unprocessed_pseudogene		7	-1	105004629	411
ENSMUSG00000011118	protein_coding	Panx3	ENSMUST00000215047	retained_intron		9	-1	37669190	1078
ENSMUSG00000091021	lincRNA	Gm17300	ENSMUST00000172202	lincRNA		4	1	132351772	1527
ENSMUSG00000002012	protein_coding	Pnck	ENSMUST00000129106	retained_intron		X	-1	73657831	843
ENSMUSG00000103395	IG_V_pseudogene	Ighv1-27	ENSMUST00000194473	IG_V_pseudogene		12	-1	114805041	340
ENSMUSG00000115919	lincRNA	Gm31583	ENSMUST00000229403	lincRNA		16	-1	24090089	3556
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000031822	protein_coding	principal1	6	1	58596671	5717
ENSMUSG00000109671	unprocessed_pseudogene	Olfr674-ps1	ENSMUST00000209383	unprocessed_pseudogene		7	-1	105007258	946
ENSMUSG00000034911	protein_coding	Ushbp1	ENSMUST00000212626	nonsense_mediated_decay		8	-1	71395790	3488
ENSMUSG00000112231	processed_pseudogene	Gm8435	ENSMUST00000219481	processed_pseudogene		10	1	88641379	792
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000229514	protein_coding		15	-1	102204253	813
ENSMUSG00000109933	processed_pseudogene	Gm7600	ENSMUST00000209657	processed_pseudogene		8	-1	11684243	785
ENSMUSG00000102315	IG_V_pseudogene	Ighv1-28	ENSMUST00000192987	IG_V_pseudogene		12	-1	114809854	351
ENSMUSG00000112428	processed_pseudogene	Gm48106	ENSMUST00000219185	processed_pseudogene		10	-1	88658230	960
ENSMUSG00000002012	protein_coding	Pnck	ENSMUST00000144187	protein_coding		X	-1	73659433	868
ENSMUSG00000110177	processed_pseudogene	Gm6524	ENSMUST00000209673	processed_pseudogene		8	-1	11694484	1443
ENSMUSG00000029469	protein_coding	Ift81	ENSMUST00000031426	protein_coding	principal1	5	-1	122614518	2950
ENSMUSG00000112869	processed_pseudogene	Gm48108	ENSMUST00000219708	processed_pseudogene		10	-1	88671269	483
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000229470	protein_coding		15	-1	102192059	581
ENSMUSG00000109623	TEC	Gm7562	ENSMUST00000210502	TEC		8	1	11674574	2537
ENSMUSG00000102512	IG_V_pseudogene	Ighv1-29	ENSMUST00000194116	IG_V_pseudogene		12	-1	114812745	342
ENSMUSG00000035818	protein_coding	Plekhs1	ENSMUST00000178590	protein_coding	alternative2	19	1	56461640	2378
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000124542	retained_intron		6	1	58640546	701
ENSMUSG00000020277	protein_coding	Pfkl	ENSMUST00000220064	processed_transcript		10	-1	78001479	782
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000231030	protein_coding		15	-1	102204233	888
ENSMUSG00000062527	protein_coding	Olfr1408	ENSMUST00000200689	protein_coding	principal1	1	-1	173137374	3453
ENSMUSG00000020277	protein_coding	Pfkl	ENSMUST00000218921	processed_transcript		10	-1	78001353	717
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000145161	protein_coding		6	1	58640560	603
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230656	protein_coding		15	-1	102203431	794
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000229252	protein_coding		15	-1	102203724	323
ENSMUSG00000020277	protein_coding	Pfkl	ENSMUST00000148818	retained_intron		10	-1	77999934	492
ENSMUSG00000010911	protein_coding	Apip	ENSMUST00000011055	protein_coding	principal1	2	1	103073675	919
ENSMUSG00000062527	protein_coding	Olfr1408	ENSMUST00000073663	protein_coding	principal1	1	-1	173131236	1037
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000229345	protein_coding		15	-1	102204256	321
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000143752	nonsense_mediated_decay		6	1	58640560	2556
ENSMUSG00000020277	protein_coding	Pfkl	ENSMUST00000218383	nonsense_mediated_decay		10	-1	78009727	650
ENSMUSG00000029469	protein_coding	Ift81	ENSMUST00000135956	retained_intron		5	-1	122560841	1383
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000229770	protein_coding		15	-1	102203893	645
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000203146	protein_coding		6	1	58640564	562
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230665	processed_transcript		15	-1	102203454	346
ENSMUSG00000029469	protein_coding	Ift81	ENSMUST00000139447	processed_transcript		5	-1	122574112	332
ENSMUSG00000020277	protein_coding	Pfkl	ENSMUST00000145716	protein_coding		10	-1	78010083	583
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000114294	protein_coding	principal1	6	1	58640564	2178
ENSMUSG00000020277	protein_coding	Pfkl	ENSMUST00000220304	retained_intron		10	-1	78009736	2141
ENSMUSG00000066000	protein_coding	Zfp979	ENSMUST00000105720	protein_coding	principal1	4	-1	147642513	2594
ENSMUSG00000029469	protein_coding	Ift81	ENSMUST00000139590	protein_coding		5	-1	122603493	593
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230895	processed_transcript		15	-1	102204201	421
ENSMUSG00000066680	unprocessed_pseudogene	Olfr1407-ps1	ENSMUST00000085885	unprocessed_pseudogene		1	1	173149171	797
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000204948	protein_coding		6	1	58640582	664
ENSMUSG00000010911	protein_coding	Apip	ENSMUST00000124540	processed_transcript		2	1	103073695	837
ENSMUSG00000029334	protein_coding	Prkg2	ENSMUST00000161490	protein_coding	principal1	5	-1	99037351	4968
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230008	processed_transcript		15	-1	102203716	492
ENSMUSG00000035818	protein_coding	Plekhs1	ENSMUST00000039666	protein_coding	principal3	19	1	56461640	2378
ENSMUSG00000066000	protein_coding	Zfp979	ENSMUST00000133006	protein_coding		4	-1	147642496	574
ENSMUSG00000030774	protein_coding	Pak1	ENSMUST00000205757	retained_intron		7	1	97788541	911
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230644	processed_transcript		15	-1	102204242	342
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000143447	retained_intron		6	1	58663409	568
ENSMUSG00000036887	protein_coding	C1qa	ENSMUST00000046285	protein_coding	principal1	4	-1	136898803	1040
ENSMUSG00000010911	protein_coding	Apip	ENSMUST00000155004	processed_transcript		2	1	103082957	502
ENSMUSG00000034911	protein_coding	Ushbp1	ENSMUST00000049184	protein_coding	principal1	8	-1	71395785	2438
ENSMUSG00000023044	protein_coding	Csad	ENSMUST00000230328	processed_transcript		15	-1	102204724	691
ENSMUSG00000066000	protein_coding	Zfp979	ENSMUST00000127826	processed_transcript		4	-1	147642508	1756
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000145685	nonsense_mediated_decay		6	1	58674568	600
ENSMUSG00000035818	protein_coding	Plekhs1	ENSMUST00000225909	protein_coding		19	1	56461656	808
ENSMUSG00000066000	protein_coding	Zfp979	ENSMUST00000037565	protein_coding	principal1	4	-1	147642508	2558
ENSMUSG00000023120	protein_coding	Ldc1	ENSMUST00000023884	protein_coding	principal1	4	-1	130222401	2314
ENSMUSG00000010911	protein_coding	Apip	ENSMUST00000147131	processed_transcript		2	1	103091836	278
ENSMUSG00000104086	lincRNA	1700039M15Rik	ENSMUST00000195377	lincRNA		9	1	107241220	1120
ENSMUSG00000058981	protein_coding	Olfr1406	ENSMUST00000215878	protein_coding	principal1	1	-1	173190637	3149
ENSMUSG00000029802	protein_coding	Abcg2	ENSMUST00000134426	retained_intron		6	1	58677621	1133
ENSMUSG00000096065	processed_pseudogene	Gm13155	ENSMUST00000119277	processed_pseudogene		4	-1	147624885	646
ENSMUSG00000103245	processed_pseudogene	Gm2071	ENSMUST00000193335	processed_pseudogene		3	1	3829284	774
ENSMUSG00000112228	lincRNA	Gm47524	ENSMUST00000220016	lincRNA		10	1	113113389	358
ENSMUSG00000034911	protein_coding	Ushbp1	ENSMUST00000212516	retained_intron		8	-1	71390286	1044
ENSMUSG00000058981	protein_coding	Olfr1406	ENSMUST00000201132	protein_coding	principal1	1	-1	173190640	2952
ENSMUSG00000029334	protein_coding	Prkg2	ENSMUST00000162619	protein_coding		5	-1	98943832	1308
ENSMUSG00000034911	protein_coding	Ushbp1	ENSMUST00000212496	retained_intron		8	-1	71389334	924
ENSMUSG00000084782	protein_coding	Gm11213	ENSMUST00000210529	protein_coding	principal1	4	-1	63600764	524
ENSMUSG00000037896	protein_coding	Rcor1	ENSMUST00000084968	protein_coding	alternative2	12	1	111039351	5684
ENSMUSG00000096773	protein_coding	Olfr675	ENSMUST00000210113	protein_coding		7	-1	105026335	3671
ENSMUSG00000029469	protein_coding	Ift81	ENSMUST00000144065	retained_intron		5	-1	122614506	872
ENSMUSG00000084782	protein_coding	Gm11213	ENSMUST00000136620	processed_transcript		4	-1	63605261	481
ENSMUSG00000031509	protein_coding	1700016D06Rik	ENSMUST00000033906	protein_coding	principal1	8	-1	11678750	1263
ENSMUSG00000112767	lincRNA	Gm47532	ENSMUST00000218916	lincRNA		10	1	113424184	506
ENSMUSG00000034911	protein_coding	Ushbp1	ENSMUST00000213000	retained_intron		8	-1	71395802	4202
ENSMUSG00000058981	protein_coding	Olfr1406	ENSMUST00000072395	protein_coding	principal1	1	-1	173184504	1063
ENSMUSG00000117975	protein_coding	Itprip	ENSMUST00000095998	protein_coding	principal1	19	-1	47919299	3760
ENSMUSG00000029469	protein_coding	Ift81	ENSMUST00000127220	protein_coding		5	-1	122614445	925
ENSMUSG00000112750	processed_pseudogene	Gm47534	ENSMUST00000219362	processed_pseudogene		10	1	113538023	469
ENSMUSG00000096773	protein_coding	Olfr675	ENSMUST00000215899	protein_coding		7	-1	105028460	3737
ENSMUSG00000096773	protein_coding	Olfr675	ENSMUST00000214318	protein_coding		7	-1	105028460	3828
ENSMUSG00000112087	lincRNA	Gm40765	ENSMUST00000218612	lincRNA		10	-1	113562763	1469
ENSMUSG00000029334	protein_coding	Prkg2	ENSMUST00000162147	protein_coding		5	-1	98943834	1389
ENSMUSG00000096773	protein_coding	Olfr675	ENSMUST00000073102	protein_coding	principal1	7	-1	105024966	942
ENSMUSG00000029334	protein_coding	Prkg2	ENSMUST00000031277	protein_coding		5	-1	99037035	2618
ENSMUSG00000052407	protein_coding	Ccdc171	ENSMUST00000125077	nonsense_mediated_decay		4	1	83525639	4231
ENSMUSG00000084021	processed_pseudogene	Gm5832	ENSMUST00000121704	processed_pseudogene		1	1	88022381	1582
ENSMUSG00000035818	protein_coding	Plekhs1	ENSMUST00000224840	retained_intron		19	1	56461659	3401
ENSMUSG00000029469	protein_coding	Ift81	ENSMUST00000196452	nonsense_mediated_decay		5	-1	122614501	698
ENSMUSG00000112438	processed_pseudogene	Gm40810	ENSMUST00000219149	processed_pseudogene		10	-1	113730302	253
ENSMUSG00000112885	processed_pseudogene	Gm29807	ENSMUST00000220161	processed_pseudogene		10	1	88673019	372
ENSMUSG00000117975	protein_coding	Itprip	ENSMUST00000237029	protein_coding		19	-1	47919250	351
ENSMUSG00000029334	protein_coding	Prkg2	ENSMUST00000160765	retained_intron		5	-1	98966756	387
ENSMUSG00000037896	protein_coding	Rcor1	ENSMUST00000116388	protein_coding	principal2	12	1	111039798	2720
ENSMUSG00000112181	processed_pseudogene	Gm47538	ENSMUST00000220147	processed_pseudogene		10	1	113731749	435
ENSMUSG00000035818	protein_coding	Plekhs1	ENSMUST00000225391	processed_transcript		19	1	56478901	150
ENSMUSG00000035818	protein_coding	Plekhs1	ENSMUST00000225008	retained_intron		19	1	56479687	2662
ENSMUSG00000052407	protein_coding	Ccdc171	ENSMUST00000107202	processed_transcript		4	1	83549660	754
ENSMUSG00000114110	processed_pseudogene	Gm46379	ENSMUST00000222551	processed_pseudogene		12	-1	111068028	265
ENSMUSG00000104006	TEC	Gm38333	ENSMUST00000193608	TEC		10	1	113996647	604
ENSMUSG00000029469	protein_coding	Ift81	ENSMUST00000196544	retained_intron		5	-1	122607369	2445
ENSMUSG00000031509	protein_coding	1700016D06Rik	ENSMUST00000190787	processed_transcript		8	-1	11660735	479
ENSMUSG00000059585	processed_pseudogene	Ube2nl	ENSMUST00000085228	processed_pseudogene		7	-1	61549701	456
ENSMUSG00000112921	TEC	Gm48104	ENSMUST00000218197	TEC		10	1	114095727	2631
ENSMUSG00000109006	lincRNA	B230209E15Rik	ENSMUST00000209115	lincRNA		7	-1	61615327	1597
ENSMUSG00000083478	unprocessed_pseudogene	Gm15375	ENSMUST00000119510	unprocessed_pseudogene		1	1	88025211	849
ENSMUSG00000029469	protein_coding	Ift81	ENSMUST00000136024	nonsense_mediated_decay		5	-1	122614516	450
ENSMUSG00000109006	lincRNA	B230209E15Rik	ENSMUST00000211785	lincRNA		7	-1	61546155	403
ENSMUSG00000104335	TEC	Gm38281	ENSMUST00000192301	TEC		10	1	114350474	315
ENSMUSG00000105815	TEC	Gm43541	ENSMUST00000197208	TEC		5	-1	122568104	581
ENSMUSG00000116173	sense_intronic	Gm32126	ENSMUST00000230625	sense_intronic		16	-1	24168561	674
ENSMUSG00000031509	protein_coding	1700016D06Rik	ENSMUST00000190741	protein_coding		8	-1	11701063	604
ENSMUSG00000031509	protein_coding	1700016D06Rik	ENSMUST00000191350	protein_coding		8	-1	11662604	298
ENSMUSG00000116785	processed_pseudogene	Gm41434	ENSMUST00000231939	processed_pseudogene		16	-1	24370232	443
ENSMUSG00000052407	protein_coding	Ccdc171	ENSMUST00000183729	processed_transcript		4	1	83695955	1075
ENSMUSG00000109986	antisense	4930465I24Rik	ENSMUST00000209697	antisense		8	1	11678808	426
ENSMUSG00000087541	antisense	Hopxos	ENSMUST00000148568	antisense		5	1	77094532	1661
ENSMUSG00000087032	lincRNA	Gm13874	ENSMUST00000130680	lincRNA		2	1	103177787	809
ENSMUSG00000080793	processed_pseudogene	Cbx3-ps3	ENSMUST00000118595	processed_pseudogene		4	1	83701084	550
ENSMUSG00000040420	protein_coding	Cdh18	ENSMUST00000163361	protein_coding		15	1	22549022	1534
ENSMUSG00000098217	processed_pseudogene	Gm27046	ENSMUST00000182160	processed_pseudogene		4	1	83597303	463
ENSMUSG00000040420	protein_coding	Cdh18	ENSMUST00000170626	retained_intron		15	1	23036455	1819
ENSMUSG00000087032	lincRNA	Gm13874	ENSMUST00000151028	lincRNA		2	1	103178171	468
ENSMUSG00000068809	protein_coding	Olfr1188	ENSMUST00000217131	protein_coding	alternative2	2	1	88556935	1406
ENSMUSG00000068809	protein_coding	Olfr1188	ENSMUST00000090701	protein_coding	principal2	2	1	88559451	968
ENSMUSG00000097942	sense_intronic	Gm26968	ENSMUST00000182894	sense_intronic		4	1	83743677	481
ENSMUSG00000087032	lincRNA	Gm13874	ENSMUST00000135348	lincRNA		2	1	103182228	941
ENSMUSG00000026114	protein_coding	Cnga3	ENSMUST00000191981	protein_coding		1	1	37214434	651
ENSMUSG00000108356	lincRNA	9130221F21Rik	ENSMUST00000206867	lincRNA		6	-1	72042528	2631
ENSMUSG00000115869	sense_intronic	Gm31814	ENSMUST00000229881	sense_intronic		16	-1	24216246	1361
ENSMUSG00000115869	sense_intronic	Gm31814	ENSMUST00000228980	sense_intronic		16	-1	24216524	1262
ENSMUSG00000081073	processed_pseudogene	Gm13758	ENSMUST00000118699	processed_pseudogene		2	1	88572052	743
ENSMUSG00000115869	sense_intronic	Gm31814	ENSMUST00000230785	sense_intronic		16	-1	24216514	616
ENSMUSG00000115869	sense_intronic	Gm31814	ENSMUST00000229480	sense_intronic		16	-1	24216513	1085
ENSMUSG00000115869	sense_intronic	Gm31814	ENSMUST00000231080	sense_intronic		16	-1	24216509	1491
ENSMUSG00000118514	unprocessed_pseudogene	AC087801.1	ENSMUST00000238820	unprocessed_pseudogene		1	1	88037600	816
ENSMUSG00000115869	sense_intronic	Gm31814	ENSMUST00000230869	sense_intronic		16	-1	24263159	497
ENSMUSG00000040420	protein_coding	Cdh18	ENSMUST00000040427	retained_intron		15	1	23036463	2320
ENSMUSG00000068808	protein_coding	Olfr1189	ENSMUST00000213679	protein_coding	principal1	2	1	88586454	1983
ENSMUSG00000115852	transcribed_processed_pseudogene	AC169509.1	ENSMUST00000230383	processed_transcript		16	-1	24289836	2760
ENSMUSG00000068808	protein_coding	Olfr1189	ENSMUST00000090700	protein_coding	principal1	2	1	88591806	921
ENSMUSG00000115852	transcribed_processed_pseudogene	AC169509.1	ENSMUST00000231672	processed_transcript		16	-1	24380124	1442
ENSMUSG00000086957	lincRNA	Gm13869	ENSMUST00000146978	lincRNA		2	-1	103210357	1054
ENSMUSG00000111196	unprocessed_pseudogene	Gm47581	ENSMUST00000213427	unprocessed_pseudogene		2	1	88605378	125
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000122842	protein_coding		13	1	37778400	445
ENSMUSG00000115852	transcribed_processed_pseudogene	AC169509.1	ENSMUST00000231554	processed_transcript		16	-1	24382390	1351
ENSMUSG00000115852	transcribed_processed_pseudogene	AC169509.1	ENSMUST00000231284	transcribed_processed_pseudogene		16	-1	24380545	934
ENSMUSG00000075126	polymorphic_pseudogene	Olfr475-ps1	ENSMUST00000117982	polymorphic_pseudogene	principal1	2	1	88623305	932
ENSMUSG00000036242	protein_coding	Armh4	ENSMUST00000036972	protein_coding	principal2	14	-1	49783383	8831
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000138043	protein_coding		13	1	37825975	342
ENSMUSG00000073915	protein_coding	Olfr676	ENSMUST00000219602	protein_coding	principal1	7	1	105032698	2802
ENSMUSG00000064326	protein_coding	Siva1	ENSMUST00000021728	protein_coding	principal1	12	1	112644679	924
ENSMUSG00000073915	protein_coding	Olfr676	ENSMUST00000215533	processed_transcript		7	1	105032698	2392
ENSMUSG00000073915	protein_coding	Olfr676	ENSMUST00000219042	processed_transcript		7	1	105032698	642
ENSMUSG00000036242	protein_coding	Armh4	ENSMUST00000118129	protein_coding	alternative2	14	-1	49783371	3100
ENSMUSG00000073915	protein_coding	Olfr676	ENSMUST00000098162	protein_coding	principal1	7	1	105035200	954
ENSMUSG00000025068	protein_coding	Gsto1	ENSMUST00000026050	protein_coding	principal1	19	1	47854970	1182
ENSMUSG00000036242	protein_coding	Armh4	ENSMUST00000177321	processed_transcript		14	-1	49751547	569
ENSMUSG00000115787	antisense	Gm36146	ENSMUST00000226994	antisense		14	1	49722652	765
ENSMUSG00000072573	antisense	Gm10369	ENSMUST00000100641	antisense		5	1	134676490	1148
ENSMUSG00000103224	processed_pseudogene	Gm2077	ENSMUST00000195017	processed_pseudogene		3	1	3939144	319
ENSMUSG00000025068	protein_coding	Gsto1	ENSMUST00000237121	protein_coding		19	1	47855030	384
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000020258	protein_coding	principal2	10	1	63243911	3898
ENSMUSG00000025068	protein_coding	Gsto1	ENSMUST00000237472	nonsense_mediated_decay		19	1	47855038	1138
ENSMUSG00000064326	protein_coding	Siva1	ENSMUST00000109755	protein_coding		12	1	112644967	333
ENSMUSG00000035354	protein_coding	Uvrag	ENSMUST00000037968	protein_coding	principal1	7	-1	99141141	5157
ENSMUSG00000073914	protein_coding	Olfr677	ENSMUST00000213204	protein_coding	principal1	7	1	105051372	3227
ENSMUSG00000074388	lincRNA	Gm5544	ENSMUST00000098828	lincRNA		3	1	97930173	891
ENSMUSG00000025068	protein_coding	Gsto1	ENSMUST00000130157	retained_intron		19	1	47855083	551
ENSMUSG00000025068	protein_coding	Gsto1	ENSMUST00000236902	processed_transcript		19	1	47855758	950
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000219577	protein_coding	alternative1	10	1	63243923	3914
ENSMUSG00000073914	protein_coding	Olfr677	ENSMUST00000098161	protein_coding	principal1	7	1	105056248	939
ENSMUSG00000040420	protein_coding	Cdh18	ENSMUST00000164787	protein_coding	principal1	15	1	23036463	2744
ENSMUSG00000064326	protein_coding	Siva1	ENSMUST00000222353	retained_intron		12	1	112646418	568
ENSMUSG00000064326	protein_coding	Siva1	ENSMUST00000222368	retained_intron		12	1	112647751	401
ENSMUSG00000037992	protein_coding	Rara	ENSMUST00000107474	protein_coding	principal1	11	1	98927818	2380
ENSMUSG00000040420	protein_coding	Cdh18	ENSMUST00000165614	protein_coding		15	1	23173451	2162
ENSMUSG00000109676	processed_pseudogene	Gm8913	ENSMUST00000209491	processed_pseudogene		7	1	105060234	641
ENSMUSG00000026114	protein_coding	Cnga3	ENSMUST00000195272	protein_coding	alternative2	1	1	37218379	2197
ENSMUSG00000064326	protein_coding	Siva1	ENSMUST00000222729	retained_intron		12	1	112647832	1317
ENSMUSG00000040420	protein_coding	Cdh18	ENSMUST00000226693	protein_coding		15	1	23173451	2165
ENSMUSG00000026114	protein_coding	Cnga3	ENSMUST00000194195	protein_coding	principal3	1	1	37218379	2083
ENSMUSG00000037992	protein_coding	Rara	ENSMUST00000107475	protein_coding	principal1	11	1	98937698	2469
ENSMUSG00000040420	protein_coding	Cdh18	ENSMUST00000167623	protein_coding		15	1	23173864	1476
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000219177	retained_intron		10	1	63243944	1775
ENSMUSG00000091223	processed_pseudogene	Gm8775	ENSMUST00000170943	processed_pseudogene		3	1	4211718	1327
ENSMUSG00000071769	protein_coding	Rhox3h	ENSMUST00000184824	protein_coding		X	-1	37661662	477
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000218533	nonsense_mediated_decay		10	1	63245822	791
ENSMUSG00000025068	protein_coding	Gsto1	ENSMUST00000143694	retained_intron		19	1	47862995	759
ENSMUSG00000003476	protein_coding	Crhr2	ENSMUST00000003568	protein_coding		6	-1	55133014	2695
ENSMUSG00000035354	protein_coding	Uvrag	ENSMUST00000209123	nonsense_mediated_decay		7	-1	99016644	3147
ENSMUSG00000060636	protein_coding	Rpl35a	ENSMUST00000078804	protein_coding	principal1	16	1	33056453	491
ENSMUSG00000035354	protein_coding	Uvrag	ENSMUST00000207919	processed_transcript		7	-1	98943905	376
ENSMUSG00000026114	protein_coding	Cnga3	ENSMUST00000027288	protein_coding	principal3	1	1	37219205	3554
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000218073	processed_transcript		10	1	63278403	732
ENSMUSG00000071769	protein_coding	Rhox3h	ENSMUST00000185138	protein_coding		X	-1	37661662	658
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000034566	protein_coding		9	-1	50727975	5709
ENSMUSG00000021646	protein_coding	Mccc2	ENSMUST00000221034	retained_intron		13	-1	99961050	936
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000043805	protein_coding	principal3	9	-1	35210980	2232
ENSMUSG00000029762	protein_coding	Akr1b8	ENSMUST00000038406	protein_coding	principal1	6	1	34354119	1358
ENSMUSG00000060636	protein_coding	Rpl35a	ENSMUST00000115079	protein_coding	principal1	16	1	33056466	510
ENSMUSG00000059325	protein_coding	Hopx	ENSMUST00000120827	protein_coding	principal1	5	-1	77095253	1217
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000220097	processed_transcript		10	1	63290504	808
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000219279	processed_transcript		10	1	63303707	429
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000151658	nonsense_mediated_decay		9	-1	35211001	2240
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000219002	retained_intron		10	1	63311847	687
ENSMUSG00000003476	protein_coding	Crhr2	ENSMUST00000212633	protein_coding		6	-1	55132960	2041
ENSMUSG00000029762	protein_coding	Akr1b8	ENSMUST00000133370	processed_transcript		6	1	34356115	849
ENSMUSG00000020064	protein_coding	Herc4	ENSMUST00000219789	processed_transcript		10	1	63314487	713
ENSMUSG00000060636	protein_coding	Rpl35a	ENSMUST00000133785	retained_intron		16	1	33056482	2858
ENSMUSG00000050296	protein_coding	Abca12	ENSMUST00000087268	protein_coding	principal1	1	-1	71414910	9137
ENSMUSG00000037992	protein_coding	Rara	ENSMUST00000068133	protein_coding	principal1	11	1	98937718	3384
ENSMUSG00000060636	protein_coding	Rpl35a	ENSMUST00000232188	processed_transcript		16	1	33056499	443
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000127996	protein_coding	alternative2	9	-1	35211055	2289
ENSMUSG00000071769	protein_coding	Rhox3h	ENSMUST00000096457	protein_coding	principal1	X	-1	37668764	1053
ENSMUSG00000060636	protein_coding	Rpl35a	ENSMUST00000137720	retained_intron		16	1	33056524	796
ENSMUSG00000037992	protein_coding	Rara	ENSMUST00000139399	processed_transcript		11	1	98938328	356
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000140177	retained_intron		9	-1	35205922	878
ENSMUSG00000021222	protein_coding	Dcaf4	ENSMUST00000021645	protein_coding	principal2	12	1	83520466	2008
ENSMUSG00000037992	protein_coding	Rara	ENSMUST00000147985	processed_transcript		11	1	98939712	307
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000135054	protein_coding		9	-1	35206234	528
ENSMUSG00000003476	protein_coding	Crhr2	ENSMUST00000095898	nonsense_mediated_decay		6	-1	55117985	1432
ENSMUSG00000045268	protein_coding	Zfp691	ENSMUST00000052715	protein_coding	principal1	4	-1	119173856	2341
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000216618	retained_intron		9	-1	35206689	825
ENSMUSG00000050296	protein_coding	Abca12	ENSMUST00000188752	retained_intron		1	-1	71307087	2860
ENSMUSG00000060636	protein_coding	Rpl35a	ENSMUST00000115078	protein_coding	principal1	16	1	33056527	500
ENSMUSG00000021222	protein_coding	Dcaf4	ENSMUST00000222502	protein_coding		12	1	83520634	508
ENSMUSG00000037992	protein_coding	Rara	ENSMUST00000107473	protein_coding		11	1	98960412	3238
ENSMUSG00000003476	protein_coding	Crhr2	ENSMUST00000114374	protein_coding	alternative1	6	-1	55117913	1440
ENSMUSG00000037243	protein_coding	Zfp692	ENSMUST00000049353	protein_coding	principal1	11	1	58307172	1860
ENSMUSG00000003476	protein_coding	Crhr2	ENSMUST00000213026	protein_coding	principal2	6	-1	55117913	1443
ENSMUSG00000045391	bidirectional_promoter_lncRNA	1700120B22Rik	ENSMUST00000054837	bidirectional_promoter_lncRNA		10	-1	63244153	464
ENSMUSG00000045268	protein_coding	Zfp691	ENSMUST00000106355	protein_coding	principal1	4	-1	119174195	1588
ENSMUSG00000060636	protein_coding	Rpl35a	ENSMUST00000115076	protein_coding	principal1	16	1	33056806	519
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000151082	retained_intron		9	-1	35210946	1004
ENSMUSG00000028373	protein_coding	Astn2	ENSMUST00000068214	protein_coding	principal4	4	-1	66404611	4959
ENSMUSG00000037992	protein_coding	Rara	ENSMUST00000164748	protein_coding	principal1	11	1	98939711	3129
ENSMUSG00000003476	protein_coding	Crhr2	ENSMUST00000164012	protein_coding		6	-1	55132841	1263
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000201352	protein_coding	principal1	5	1	31697684	1888
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000142595	protein_coding		9	-1	35210996	721
ENSMUSG00000003476	protein_coding	Crhr2	ENSMUST00000204117	retained_intron		6	-1	55100573	794
ENSMUSG00000102190	TEC	Gm38166	ENSMUST00000191660	TEC		3	-1	45775894	471
ENSMUSG00000060636	protein_coding	Rpl35a	ENSMUST00000115075	protein_coding	principal1	16	1	33057018	518
ENSMUSG00000045268	protein_coding	Zfp691	ENSMUST00000154226	protein_coding		4	-1	119173856	241
ENSMUSG00000078489	processed_transcript	Gm17106	ENSMUST00000105610	processed_transcript		16	-1	33108601	459
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000139703	nonsense_mediated_decay		9	-1	35210922	704
ENSMUSG00000028373	protein_coding	Astn2	ENSMUST00000084496	protein_coding	alternative2	4	-1	66404483	4675
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000202815	protein_coding		5	1	31697750	462
ENSMUSG00000037243	protein_coding	Zfp692	ENSMUST00000153510	protein_coding	principal1	11	1	58307069	1887
ENSMUSG00000045268	protein_coding	Zfp691	ENSMUST00000179290	protein_coding	principal1	4	-1	119173856	1721
ENSMUSG00000035354	protein_coding	Uvrag	ENSMUST00000208609	retained_intron		7	-1	99141128	3725
ENSMUSG00000039048	protein_coding	Foxred1	ENSMUST00000138692	nonsense_mediated_decay		9	-1	35210897	735
ENSMUSG00000106427	TEC	Gm42820	ENSMUST00000200084	TEC		3	1	98121588	3063
ENSMUSG00000003476	protein_coding	Crhr2	ENSMUST00000166954	retained_intron		6	-1	55133016	2924
ENSMUSG00000050296	protein_coding	Abca12	ENSMUST00000187097	retained_intron		1	-1	71414910	3186
ENSMUSG00000035354	protein_coding	Uvrag	ENSMUST00000207032	retained_intron		7	-1	99141132	1792
ENSMUSG00000021222	protein_coding	Dcaf4	ENSMUST00000221769	processed_transcript		12	1	83524788	855
ENSMUSG00000087347	processed_transcript	1700047K16Rik	ENSMUST00000145068	processed_transcript		11	1	58322988	886
ENSMUSG00000050296	protein_coding	Abca12	ENSMUST00000191520	retained_intron		1	-1	71335786	3169
ENSMUSG00000003476	protein_coding	Crhr2	ENSMUST00000169777	retained_intron		6	-1	55117771	425
ENSMUSG00000035354	protein_coding	Uvrag	ENSMUST00000208992	nonsense_mediated_decay		7	-1	99141126	1577
ENSMUSG00000050296	protein_coding	Abca12	ENSMUST00000189102	retained_intron		1	-1	71414896	1489
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000201487	retained_intron		5	1	31697970	742
ENSMUSG00000021222	protein_coding	Dcaf4	ENSMUST00000223291	protein_coding	alternative2	12	1	83526000	2005
ENSMUSG00000110774	antisense	Gm39318	ENSMUST00000214606	antisense		9	1	35188663	1118
ENSMUSG00000035354	protein_coding	Uvrag	ENSMUST00000208012	processed_transcript		7	-1	99099427	366
ENSMUSG00000111985	processed_pseudogene	Gm8290	ENSMUST00000218202	processed_pseudogene		10	1	82008379	477
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000201592	processed_transcript		5	1	31697996	587
ENSMUSG00000027878	protein_coding	Notch2	ENSMUST00000198324	retained_intron		3	1	98013527	1896
ENSMUSG00000021222	protein_coding	Dcaf4	ENSMUST00000222833	processed_transcript		12	1	83526074	572
ENSMUSG00000085945	bidirectional_promoter_lncRNA	2310014F06Rik	ENSMUST00000146145	bidirectional_promoter_lncRNA		7	-1	112680058	1567
ENSMUSG00000035354	protein_coding	Uvrag	ENSMUST00000208502	processed_transcript		7	-1	99141118	654
ENSMUSG00000080720	processed_pseudogene	Gm16077	ENSMUST00000121915	processed_pseudogene		15	1	5092547	655
ENSMUSG00000021222	protein_coding	Dcaf4	ENSMUST00000222607	retained_intron		12	1	83534860	403
ENSMUSG00000085945	bidirectional_promoter_lncRNA	2310014F06Rik	ENSMUST00000211302	bidirectional_promoter_lncRNA		7	-1	112680081	1563
ENSMUSG00000109073	TEC	Gm44975	ENSMUST00000207435	TEC		7	-1	99123459	1390
ENSMUSG00000021222	protein_coding	Dcaf4	ENSMUST00000222725	retained_intron		12	1	83535900	376
ENSMUSG00000112502	processed_pseudogene	Gm46194	ENSMUST00000218136	processed_pseudogene		10	-1	82009800	320
ENSMUSG00000021222	protein_coding	Dcaf4	ENSMUST00000221944	retained_intron		12	1	83537467	663
ENSMUSG00000032577	protein_coding	Mapkapk3	ENSMUST00000035194	protein_coding	principal1	9	-1	107289877	2816
ENSMUSG00000051335	protein_coding	Gfod1	ENSMUST00000055341	protein_coding	principal1	13	-1	43304172	6928
ENSMUSG00000104814	TEC	Gm42979	ENSMUST00000196287	TEC		5	1	129556147	2228
ENSMUSG00000112790	TEC	Gm33378	ENSMUST00000219831	TEC		10	1	82014473	2758
ENSMUSG00000070520	protein_coding	Nsmce3	ENSMUST00000094331	protein_coding	principal1	7	-1	64872997	5946
ENSMUSG00000118314	lincRNA	1700001K23Rik	ENSMUST00000237869	lincRNA		19	-1	53255190	473
ENSMUSG00000049755	protein_coding	Zfp672	ENSMUST00000057836	protein_coding	principal1	11	-1	58323323	2862
ENSMUSG00000118314	lincRNA	1700001K23Rik	ENSMUST00000236696	lincRNA		19	-1	53255220	687
ENSMUSG00000021646	protein_coding	Mccc2	ENSMUST00000222083	protein_coding		13	-1	99971816	1140
ENSMUSG00000032042	protein_coding	Srpr	ENSMUST00000138287	protein_coding		9	1	35200175	759
ENSMUSG00000111713	antisense	Gm20234	ENSMUST00000214134	antisense		11	-1	83071246	717
ENSMUSG00000118314	lincRNA	1700001K23Rik	ENSMUST00000235665	lincRNA		19	-1	53255198	478
ENSMUSG00000051335	protein_coding	Gfod1	ENSMUST00000222779	protein_coding		13	-1	43303405	441
ENSMUSG00000059325	protein_coding	Hopx	ENSMUST00000113453	protein_coding	principal1	5	-1	77095277	1113
ENSMUSG00000118314	lincRNA	1700001K23Rik	ENSMUST00000235503	lincRNA		19	-1	53265405	565
ENSMUSG00000118314	lincRNA	1700001K23Rik	ENSMUST00000237379	lincRNA		19	-1	53255199	741
ENSMUSG00000028661	protein_coding	Epha8	ENSMUST00000030420	protein_coding	principal1	4	-1	136956816	4713
ENSMUSG00000072620	protein_coding	Slfn2	ENSMUST00000038038	protein_coding	principal1	11	1	83065112	1664
ENSMUSG00000049755	protein_coding	Zfp672	ENSMUST00000108829	protein_coding	principal1	11	-1	58323113	3094
ENSMUSG00000032577	protein_coding	Mapkapk3	ENSMUST00000143487	retained_intron		9	-1	107289747	3729
ENSMUSG00000112381	processed_pseudogene	Gm8170	ENSMUST00000218581	processed_pseudogene		10	1	82020551	945
ENSMUSG00000059325	protein_coding	Hopx	ENSMUST00000081964	protein_coding	principal1	5	-1	77115121	1261
ENSMUSG00000032577	protein_coding	Mapkapk3	ENSMUST00000128175	retained_intron		9	-1	107257292	523
ENSMUSG00000111016	lincRNA	Gm48462	ENSMUST00000213219	lincRNA		11	1	83094220	358
ENSMUSG00000073913	protein_coding	Olfr678	ENSMUST00000213622	protein_coding	principal1	7	1	105064475	2369
ENSMUSG00000049755	protein_coding	Zfp672	ENSMUST00000186859	protein_coding		11	-1	58330331	697
ENSMUSG00000032577	protein_coding	Mapkapk3	ENSMUST00000192054	protein_coding		9	-1	107289344	944
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000141919	retained_intron		9	-1	50699362	6453
ENSMUSG00000049755	protein_coding	Zfp672	ENSMUST00000155662	protein_coding		11	-1	58319954	839
ENSMUSG00000015224	protein_coding	Cyp2j9	ENSMUST00000055693	protein_coding	principal1	4	-1	96591578	2037
ENSMUSG00000073913	protein_coding	Olfr678	ENSMUST00000098160	protein_coding	principal1	7	1	105069469	942
ENSMUSG00000032577	protein_coding	Mapkapk3	ENSMUST00000141674	processed_transcript		9	-1	107261936	470
ENSMUSG00000118274	processed_pseudogene	Gm50204	ENSMUST00000236207	processed_pseudogene		18	-1	89379617	313
ENSMUSG00000104233	processed_pseudogene	Gm34023	ENSMUST00000195539	processed_pseudogene		3	1	4371808	217
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000117646	protein_coding	principal1	9	-1	50728067	5719
ENSMUSG00000104054	processed_pseudogene	Gm38131	ENSMUST00000192449	processed_pseudogene		3	-1	4394299	430
ENSMUSG00000049755	protein_coding	Zfp672	ENSMUST00000135097	processed_transcript		11	-1	58323314	426
ENSMUSG00000061371	protein_coding	Zfp873	ENSMUST00000210325	protein_coding	principal1	10	1	82048123	2360
ENSMUSG00000104073	processed_pseudogene	Gm37029	ENSMUST00000195773	processed_pseudogene		3	1	4504831	239
ENSMUSG00000049755	protein_coding	Zfp672	ENSMUST00000130217	processed_transcript		11	-1	58323314	423
ENSMUSG00000032577	protein_coding	Mapkapk3	ENSMUST00000155860	retained_intron		9	-1	107289779	1431
ENSMUSG00000049755	protein_coding	Zfp672	ENSMUST00000185661	retained_intron		11	-1	58330339	3125
ENSMUSG00000109972	processed_pseudogene	Gm17989	ENSMUST00000211543	processed_pseudogene		7	1	105076918	412
ENSMUSG00000015224	protein_coding	Cyp2j9	ENSMUST00000126509	retained_intron		4	-1	96591578	2536
ENSMUSG00000061371	protein_coding	Zfp873	ENSMUST00000209622	protein_coding		10	1	82048143	2284
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000119449	processed_transcript		9	-1	50696758	1434
ENSMUSG00000032577	protein_coding	Mapkapk3	ENSMUST00000134682	protein_coding		9	-1	107280915	333
ENSMUSG00000061371	protein_coding	Zfp873	ENSMUST00000211338	retained_intron		10	1	82059260	2325
ENSMUSG00000105730	lincRNA	Gm43838	ENSMUST00000196357	lincRNA		5	1	64360514	348
ENSMUSG00000061371	protein_coding	Zfp873	ENSMUST00000209614	processed_transcript		10	1	82060259	1647
ENSMUSG00000094586	protein_coding	Vmn1r41	ENSMUST00000204949	protein_coding	principal1	6	1	89740766	1378
ENSMUSG00000049755	protein_coding	Zfp672	ENSMUST00000064786	protein_coding	principal1	11	-1	58323346	2765
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000201107	retained_intron		5	1	31698006	2034
ENSMUSG00000102998	processed_pseudogene	Gm37763	ENSMUST00000193445	processed_pseudogene		3	1	4648675	120
ENSMUSG00000032577	protein_coding	Mapkapk3	ENSMUST00000141596	processed_transcript		9	-1	107289779	1000
ENSMUSG00000061371	protein_coding	Zfp873	ENSMUST00000105313	protein_coding		10	1	82058417	1893
ENSMUSG00000049755	protein_coding	Zfp672	ENSMUST00000065533	protein_coding		11	-1	58330339	2619
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000201202	retained_intron		5	1	31698014	715
ENSMUSG00000094586	protein_coding	Vmn1r41	ENSMUST00000228068	protein_coding	principal1	6	1	89740766	1536
ENSMUSG00000110293	lincRNA	Gm45557	ENSMUST00000210004	lincRNA		7	-1	105080080	1651
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000114515	protein_coding		5	1	31698030	1497
ENSMUSG00000112373	processed_pseudogene	Gm18556	ENSMUST00000219748	processed_pseudogene		10	-1	82057239	1031
ENSMUSG00000108344	processed_pseudogene	Gm8952	ENSMUST00000206828	processed_pseudogene		6	-1	72074153	1102
ENSMUSG00000094586	protein_coding	Vmn1r41	ENSMUST00000227630	protein_coding		6	1	89740766	827
ENSMUSG00000082532	processed_pseudogene	Rpl31-ps6	ENSMUST00000119959	processed_pseudogene		5	1	123466509	378
ENSMUSG00000094586	protein_coding	Vmn1r41	ENSMUST00000226337	protein_coding		6	1	89740766	888
ENSMUSG00000094586	protein_coding	Vmn1r41	ENSMUST00000227039	protein_coding		6	1	89740766	985
ENSMUSG00000030774	protein_coding	Pak1	ENSMUST00000206984	protein_coding	principal1	7	1	97788541	2794
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000121634	protein_coding		9	-1	50739517	2420
ENSMUSG00000032042	protein_coding	Srpr	ENSMUST00000034541	protein_coding	principal1	9	1	35211155	2993
ENSMUSG00000094586	protein_coding	Vmn1r41	ENSMUST00000226562	protein_coding		6	1	89740766	1046
ENSMUSG00000030774	protein_coding	Pak1	ENSMUST00000206351	protein_coding		7	1	97830928	508
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000124424	retained_intron		9	-1	50684394	1099
ENSMUSG00000108355	processed_pseudogene	Gm44604	ENSMUST00000205475	processed_pseudogene		6	-1	72087854	496
ENSMUSG00000091366	transcribed_processed_pseudogene	Gm17040	ENSMUST00000170597	transcribed_processed_pseudogene		9	-1	107293323	889
ENSMUSG00000032042	protein_coding	Srpr	ENSMUST00000154005	retained_intron		9	1	35211894	478
ENSMUSG00000021646	protein_coding	Mccc2	ENSMUST00000022148	protein_coding	principal1	13	-1	100015639	2123
ENSMUSG00000091366	transcribed_processed_pseudogene	Gm17040	ENSMUST00000168672	processed_transcript		9	-1	107297192	548
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000120622	protein_coding		9	-1	50693799	1379
ENSMUSG00000032042	protein_coding	Srpr	ENSMUST00000132799	protein_coding		9	1	35214899	630
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000151109	processed_transcript		9	-1	50699437	364
ENSMUSG00000044948	protein_coding	Cfap43	ENSMUST00000160247	protein_coding	principal2	19	-1	47837382	5968
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000149717	retained_intron		9	-1	50698635	415
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000173836	protein_coding		5	1	37028335	849
ENSMUSG00000021646	protein_coding	Mccc2	ENSMUST00000223013	retained_intron		13	-1	99975316	836
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000154315	processed_transcript		9	-1	50697771	341
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000172940	processed_transcript		5	1	37029112	512
ENSMUSG00000030774	protein_coding	Pak1	ENSMUST00000033040	protein_coding	principal1	7	1	97842935	3065
ENSMUSG00000021646	protein_coding	Mccc2	ENSMUST00000221344	nonsense_mediated_decay		13	-1	100015594	670
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000117093	protein_coding		9	-1	50739447	1613
ENSMUSG00000031609	protein_coding	Sap30	ENSMUST00000034022	protein_coding	principal1	8	-1	57487860	1178
ENSMUSG00000044948	protein_coding	Cfap43	ENSMUST00000161832	protein_coding	alternative2	19	-1	47763580	1940
ENSMUSG00000030518	protein_coding	Fam189a1	ENSMUST00000119118	protein_coding	principal1	7	-1	65156570	4801
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000172917	protein_coding		5	1	37029867	844
ENSMUSG00000032064	protein_coding	Dixdc1	ENSMUST00000118707	protein_coding		9	-1	50727938	989
ENSMUSG00000021646	protein_coding	Mccc2	ENSMUST00000221846	processed_transcript		13	-1	100015618	472
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000174097	protein_coding		5	1	37029887	443
ENSMUSG00000054134	protein_coding	Umodl1	ENSMUST00000114555	protein_coding	principal2	17	1	30954640	5086
ENSMUSG00000032578	protein_coding	Cish	ENSMUST00000085102	protein_coding	principal1	9	1	107296026	2850
ENSMUSG00000030518	protein_coding	Fam189a1	ENSMUST00000133883	processed_transcript		7	-1	64773652	3842
ENSMUSG00000044948	protein_coding	Cfap43	ENSMUST00000162657	nonsense_mediated_decay		19	-1	47763580	2047
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000173048	processed_transcript		5	1	37047022	306
ENSMUSG00000030518	protein_coding	Fam189a1	ENSMUST00000149851	protein_coding		7	-1	64925560	743
ENSMUSG00000030518	protein_coding	Fam189a1	ENSMUST00000148459	protein_coding		7	-1	65156416	612
ENSMUSG00000073514	protein_coding	Dok6	ENSMUST00000097495	protein_coding	principal1	18	-1	89769528	10099
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000147014	retained_intron		5	1	37047432	1834
ENSMUSG00000044948	protein_coding	Cfap43	ENSMUST00000159999	processed_transcript		19	-1	47763588	680
ENSMUSG00000030518	protein_coding	Fam189a1	ENSMUST00000144535	retained_intron		7	-1	64856397	424
ENSMUSG00000073514	protein_coding	Dok6	ENSMUST00000160328	retained_intron		18	-1	89560069	4082
ENSMUSG00000032578	protein_coding	Cish	ENSMUST00000168260	protein_coding		9	1	107296710	2742
ENSMUSG00000090047	processed_pseudogene	Gm16297	ENSMUST00000161466	processed_pseudogene		18	1	89534603	459
ENSMUSG00000089885	processed_pseudogene	Gm16296	ENSMUST00000159905	processed_pseudogene		18	-1	89534462	423
ENSMUSG00000032578	protein_coding	Cish	ENSMUST00000165664	processed_transcript		9	1	107296907	4697
ENSMUSG00000020349	protein_coding	Ppp2ca	ENSMUST00000020608	protein_coding	principal1	11	1	52098681	7102
ENSMUSG00000071721	lincRNA	1700010D01Rik	ENSMUST00000096366	lincRNA		X	-1	95733265	507
ENSMUSG00000030774	protein_coding	Pak1	ENSMUST00000156637	nonsense_mediated_decay		7	1	97842935	2709
ENSMUSG00000032578	protein_coding	Cish	ENSMUST00000167072	protein_coding		9	1	107296912	411
ENSMUSG00000030774	protein_coding	Pak1	ENSMUST00000207017	retained_intron		7	1	97893915	952
ENSMUSG00000020349	protein_coding	Ppp2ca	ENSMUST00000142939	retained_intron		11	1	52118743	566
ENSMUSG00000032578	protein_coding	Cish	ENSMUST00000171568	processed_transcript		9	1	107299155	371
ENSMUSG00000108285	lincRNA	Gm34358	ENSMUST00000204585	lincRNA		6	1	55154459	665
ENSMUSG00000090570	antisense	Gm17041	ENSMUST00000163196	antisense		9	-1	107301838	479
ENSMUSG00000102281	IG_V_pseudogene	Ighv1-30	ENSMUST00000194082	IG_V_pseudogene		12	-1	114817526	349
ENSMUSG00000096649	IG_V_gene	Ighv1-31	ENSMUST00000195735	IG_V_gene		12	-1	114829697	351
ENSMUSG00000035045	protein_coding	Zc3h12b	ENSMUST00000150123	processed_transcript		X	1	95711678	1916
ENSMUSG00000096649	IG_V_gene	Ighv1-31	ENSMUST00000103511	IG_V_gene	principal1	12	-1	114829557	294
ENSMUSG00000062204	protein_coding	Olfr1373	ENSMUST00000078264	protein_coding	principal1	11	-1	52145528	936
ENSMUSG00000054134	protein_coding	Umodl1	ENSMUST00000237889	protein_coding	alternative2	17	1	30954679	4960
ENSMUSG00000035045	protein_coding	Zc3h12b	ENSMUST00000082183	protein_coding	principal1	X	1	95899033	2831
ENSMUSG00000054134	protein_coding	Umodl1	ENSMUST00000235156	protein_coding	alternative2	17	1	30954679	4702
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000072873	protein_coding	alternative2	11	1	70562890	4610
ENSMUSG00000044948	protein_coding	Cfap43	ENSMUST00000026048	retained_intron		19	-1	47919287	2303
ENSMUSG00000027878	protein_coding	Notch2	ENSMUST00000079812	protein_coding	principal1	3	1	98013538	10500
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000063813	protein_coding		5	1	31698050	1410
ENSMUSG00000008932	protein_coding	Slc1a7	ENSMUST00000106713	protein_coding	principal1	4	1	107968332	3007
ENSMUSG00000021076	protein_coding	Actr10	ENSMUST00000021479	protein_coding	principal1	12	1	70937857	4022
ENSMUSG00000044948	protein_coding	Cfap43	ENSMUST00000160970	processed_transcript		19	-1	47812146	647
ENSMUSG00000035045	protein_coding	Zc3h12b	ENSMUST00000145362	nonsense_mediated_decay		X	1	95899120	6914
ENSMUSG00000044948	protein_coding	Cfap43	ENSMUST00000159204	retained_intron		19	-1	47837361	892
ENSMUSG00000105728	TEC	Gm42819	ENSMUST00000199630	TEC		3	1	98030687	5121
ENSMUSG00000008932	protein_coding	Slc1a7	ENSMUST00000124190	retained_intron		4	1	108010017	1887
ENSMUSG00000035045	protein_coding	Zc3h12b	ENSMUST00000127461	protein_coding		X	1	95922390	758
ENSMUSG00000008932	protein_coding	Slc1a7	ENSMUST00000238795	protein_coding		4	1	107968334	3005
ENSMUSG00000117086	processed_pseudogene	Gm31328	ENSMUST00000233887	processed_pseudogene		17	-1	74327744	156
ENSMUSG00000021076	protein_coding	Actr10	ENSMUST00000220582	nonsense_mediated_decay		12	1	70937915	567
ENSMUSG00000117202	processed_pseudogene	Gm9349	ENSMUST00000232994	processed_pseudogene		17	-1	74329888	356
ENSMUSG00000054134	protein_coding	Umodl1	ENSMUST00000235827	protein_coding		17	1	31001945	861
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000100052	protein_coding	principal1	16	-1	22163299	3899
ENSMUSG00000021076	protein_coding	Actr10	ENSMUST00000220770	retained_intron		12	1	70937932	3035
ENSMUSG00000000394	protein_coding	Gcg	ENSMUST00000102733	protein_coding	principal1	2	-1	62483650	1088
ENSMUSG00000021076	protein_coding	Actr10	ENSMUST00000222291	retained_intron		12	1	70937943	615
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000071531	protein_coding		5	1	31698050	1308
ENSMUSG00000030214	protein_coding	Plbd1	ENSMUST00000032336	protein_coding	principal1	6	-1	136661928	2010
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000137019	protein_coding		5	1	37047473	1224
ENSMUSG00000021076	protein_coding	Actr10	ENSMUST00000223549	protein_coding		12	1	70939942	663
ENSMUSG00000054134	protein_coding	Umodl1	ENSMUST00000066554	protein_coding	principal2	17	1	30954679	5007
ENSMUSG00000021076	protein_coding	Actr10	ENSMUST00000221165	retained_intron		12	1	70940345	3032
ENSMUSG00000054134	protein_coding	Umodl1	ENSMUST00000066981	protein_coding	alternative2	17	1	30954679	4662
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000102559	protein_coding	principal4	11	1	70562898	4865
ENSMUSG00000023923	protein_coding	Tbc1d5	ENSMUST00000024717	protein_coding	principal2	17	-1	51179168	5435
ENSMUSG00000021076	protein_coding	Actr10	ENSMUST00000221583	retained_intron		12	1	70954324	662
ENSMUSG00000118382	transcribed_processed_pseudogene	Gm8373	ENSMUST00000236944	processed_transcript		17	1	30603105	2107
ENSMUSG00000000394	protein_coding	Gcg	ENSMUST00000136686	protein_coding		2	-1	62483645	654
ENSMUSG00000030214	protein_coding	Plbd1	ENSMUST00000137139	retained_intron		6	-1	136661873	2058
ENSMUSG00000021076	protein_coding	Actr10	ENSMUST00000220452	retained_intron		12	1	70959706	532
ENSMUSG00000118382	transcribed_processed_pseudogene	Gm8373	ENSMUST00000235258	transcribed_processed_pseudogene		17	1	30603221	454
ENSMUSG00000000394	protein_coding	Gcg	ENSMUST00000155624	processed_transcript		2	-1	62480678	767
ENSMUSG00000118281	lincRNA	Gm50242	ENSMUST00000235757	lincRNA		17	1	30880471	1118
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000079244	protein_coding	alternative2	11	1	70563017	4829
ENSMUSG00000030214	protein_coding	Plbd1	ENSMUST00000133911	retained_intron		6	-1	136634558	706
ENSMUSG00000107760	TEC	Gm44401	ENSMUST00000204462	TEC		6	1	136620632	2375
ENSMUSG00000118169	antisense	Gm50249	ENSMUST00000236274	antisense		17	-1	30970005	1216
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000053737	protein_coding	principal1	5	1	129501221	3313
ENSMUSG00000066150	protein_coding	Slc31a1	ENSMUST00000084526	protein_coding	principal1	4	1	62360727	3718
ENSMUSG00000032579	protein_coding	Hemk1	ENSMUST00000035196	protein_coding	principal1	9	-1	107338350	2192
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000131995	protein_coding		5	1	31698050	1220
ENSMUSG00000043131	protein_coding	Mob1a	ENSMUST00000055261	protein_coding	principal1	6	1	83326016	4412
ENSMUSG00000108709	antisense	4933431G14Rik	ENSMUST00000206696	antisense		6	-1	72122940	1266
ENSMUSG00000117749	TEC	Gm50245	ENSMUST00000236095	TEC		17	1	30607056	1210
ENSMUSG00000108709	antisense	4933431G14Rik	ENSMUST00000205571	antisense		6	-1	72123197	1670
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000114507	protein_coding		5	1	31698050	1143
ENSMUSG00000101823	TEC	Gm29438	ENSMUST00000191298	TEC		6	1	72104201	2613
ENSMUSG00000021097	protein_coding	Clmn	ENSMUST00000109936	protein_coding	alternative2	12	-1	104865076	11866
ENSMUSG00000066150	protein_coding	Slc31a1	ENSMUST00000122092	protein_coding		4	1	62385501	4154
ENSMUSG00000043131	protein_coding	Mob1a	ENSMUST00000146420	processed_transcript		6	1	83326018	749
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000202293	nonsense_mediated_decay		5	1	31698051	668
ENSMUSG00000043131	protein_coding	Mob1a	ENSMUST00000133045	nonsense_mediated_decay		6	1	83326036	447
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000200705	nonsense_mediated_decay		5	1	31701845	842
ENSMUSG00000043131	protein_coding	Mob1a	ENSMUST00000038658	protein_coding		6	1	83326080	4119
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000202270	processed_transcript		5	1	31785383	339
ENSMUSG00000041849	protein_coding	Card6	ENSMUST00000118365	protein_coding	principal1	15	-1	5108539	5995
ENSMUSG00000117786	antisense	Gm10503	ENSMUST00000236572	antisense		17	-1	30963220	4014
ENSMUSG00000043131	protein_coding	Mob1a	ENSMUST00000101245	nonsense_mediated_decay		6	1	83326085	2292
ENSMUSG00000032579	protein_coding	Hemk1	ENSMUST00000148165	retained_intron		9	-1	107338317	1888
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000202080	processed_transcript		5	1	32045978	377
ENSMUSG00000048938	protein_coding	Nr1h5	ENSMUST00000058899	protein_coding	principal3	3	-1	102964133	2835
ENSMUSG00000117962	processed_pseudogene	Gm6402	ENSMUST00000235315	processed_pseudogene		17	-1	30396033	414
ENSMUSG00000118053	TEC	Gm50244	ENSMUST00000237205	TEC		17	1	30591508	418
ENSMUSG00000043131	protein_coding	Mob1a	ENSMUST00000155580	protein_coding		6	1	83326360	371
ENSMUSG00000032579	protein_coding	Hemk1	ENSMUST00000128396	processed_transcript		9	-1	107336663	315
ENSMUSG00000052139	protein_coding	Babam2	ENSMUST00000202087	processed_transcript		5	1	32079697	576
ENSMUSG00000019907	protein_coding	Ppp1r12a	ENSMUST00000219263	protein_coding	principal1	10	1	108162193	3355
ENSMUSG00000032579	protein_coding	Hemk1	ENSMUST00000194260	retained_intron		9	-1	107329452	700
ENSMUSG00000105443	lincRNA	Gm43837	ENSMUST00000200306	lincRNA		5	1	64383454	668
ENSMUSG00000041849	protein_coding	Card6	ENSMUST00000141020	protein_coding		15	-1	5108484	697
ENSMUSG00000032579	protein_coding	Hemk1	ENSMUST00000118051	protein_coding		9	-1	107338332	453
ENSMUSG00000107140	TEC	Gm43811	ENSMUST00000202862	TEC		5	1	31926697	695
ENSMUSG00000096917	processed_transcript	2500002B13Rik	ENSMUST00000180690	bidirectional_promoter_lncRNA		8	1	57488054	2618
ENSMUSG00000032579	protein_coding	Hemk1	ENSMUST00000194735	retained_intron		9	-1	107330800	164
ENSMUSG00000021097	protein_coding	Clmn	ENSMUST00000109937	protein_coding	principal4	12	-1	104865009	3529
ENSMUSG00000096917	processed_transcript	2500002B13Rik	ENSMUST00000210752	lincRNA		8	1	57505815	298
ENSMUSG00000112160	protein_coding	BC024063	ENSMUST00000220287	protein_coding	principal1	10	1	82083353	2726
ENSMUSG00000100911	lincRNA	1700027F09Rik	ENSMUST00000189767	lincRNA		5	-1	64467943	767
ENSMUSG00000032579	protein_coding	Hemk1	ENSMUST00000128895	retained_intron		9	-1	107338301	1619
ENSMUSG00000021273	protein_coding	Fdft1	ENSMUST00000238526	protein_coding		14	-1	63164925	3048
ENSMUSG00000019907	protein_coding	Ppp1r12a	ENSMUST00000070663	protein_coding		10	1	108162400	3403
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000201999	processed_transcript		5	1	31596935	2045
ENSMUSG00000105105	lincRNA	Gm31363	ENSMUST00000199362	lincRNA		5	1	64433955	541
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000202953	processed_transcript		5	1	31598733	367
ENSMUSG00000048938	protein_coding	Nr1h5	ENSMUST00000198472	nonsense_mediated_decay		3	-1	102958383	1451
ENSMUSG00000105251	TEC	4930526M16Rik	ENSMUST00000197305	TEC		5	1	64468057	954
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000129913	retained_intron		16	-1	22163019	4952
ENSMUSG00000102144	lincRNA	4930429P21Rik	ENSMUST00000194530	lincRNA		9	-1	107352050	254
ENSMUSG00000048938	protein_coding	Nr1h5	ENSMUST00000196983	protein_coding	alternative2	3	-1	102958383	1494
ENSMUSG00000107165	TEC	Gm43747	ENSMUST00000201412	TEC		5	1	74575947	1330
ENSMUSG00000019907	protein_coding	Ppp1r12a	ENSMUST00000219759	protein_coding		10	1	108249594	4212
ENSMUSG00000021273	protein_coding	Fdft1	ENSMUST00000224625	protein_coding	principal1	14	-1	63179578	3698
ENSMUSG00000048938	protein_coding	Nr1h5	ENSMUST00000197412	nonsense_mediated_decay		3	-1	102958383	1475
ENSMUSG00000102144	lincRNA	4930429P21Rik	ENSMUST00000194547	lincRNA		9	-1	107353986	2061
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000134188	retained_intron		16	-1	22089118	3267
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000231926	processed_transcript		16	-1	22121274	3337
ENSMUSG00000048938	protein_coding	Nr1h5	ENSMUST00000196135	protein_coding		3	-1	102958383	1344
ENSMUSG00000078763	protein_coding	Slfn1	ENSMUST00000037994	protein_coding	principal1	11	1	83116849	1864
ENSMUSG00000021273	protein_coding	Fdft1	ENSMUST00000223810	nonsense_mediated_decay		14	-1	63177797	808
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000115379	protein_coding		16	-1	22161450	3078
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000102558	protein_coding	alternative2	11	1	70563070	3903
ENSMUSG00000021273	protein_coding	Fdft1	ENSMUST00000224267	retained_intron		14	-1	63164925	664
ENSMUSG00000066149	protein_coding	Cdc26	ENSMUST00000134727	nonsense_mediated_decay		4	-1	62408642	4326
ENSMUSG00000021097	protein_coding	Clmn	ENSMUST00000223103	nonsense_mediated_decay		12	-1	104865076	3362
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000124318	retained_intron		16	-1	22063697	724
ENSMUSG00000031921	protein_coding	Terf2	ENSMUST00000133925	protein_coding	principal3	8	-1	107096545	2666
ENSMUSG00000021097	protein_coding	Clmn	ENSMUST00000223342	nonsense_mediated_decay		12	-1	104865076	3455
ENSMUSG00000019907	protein_coding	Ppp1r12a	ENSMUST00000218773	processed_transcript		10	1	108249617	386
ENSMUSG00000021097	protein_coding	Clmn	ENSMUST00000223177	nonsense_mediated_decay		12	-1	104865076	3307
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000146885	retained_intron		16	-1	22079118	631
ENSMUSG00000078435	protein_coding	AU041133	ENSMUST00000201286	protein_coding	principal1	10	1	82128013	2634
ENSMUSG00000085657	antisense	Gm15984	ENSMUST00000156466	antisense		5	1	74702598	1534
ENSMUSG00000019907	protein_coding	Ppp1r12a	ENSMUST00000219068	retained_intron		10	1	108252372	590
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000133310	processed_transcript		11	1	70598988	765
ENSMUSG00000021273	protein_coding	Fdft1	ENSMUST00000054963	protein_coding	principal1	14	-1	63177793	2860
ENSMUSG00000085657	antisense	Gm15984	ENSMUST00000155864	antisense		5	1	74703020	339
ENSMUSG00000078435	protein_coding	AU041133	ENSMUST00000105314	protein_coding		10	1	82138253	1494
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000196698	nonsense_mediated_decay		5	1	129501240	2625
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000151087	processed_transcript		16	-1	22137209	403
ENSMUSG00000111344	processed_pseudogene	Gm48467	ENSMUST00000214874	processed_pseudogene		11	-1	83125180	361
ENSMUSG00000021097	protein_coding	Clmn	ENSMUST00000222323	protein_coding		12	-1	104780871	621
ENSMUSG00000066149	protein_coding	Cdc26	ENSMUST00000084525	protein_coding	principal1	4	-1	62408642	819
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000232504	processed_transcript		16	-1	22121236	334
ENSMUSG00000087430	antisense	Gm13405	ENSMUST00000146769	antisense		2	-1	31211347	708
ENSMUSG00000031921	protein_coding	Terf2	ENSMUST00000142616	nonsense_mediated_decay		8	-1	107096190	2140
ENSMUSG00000112922	TEC	Gm47572	ENSMUST00000219013	TEC		10	1	82157101	3361
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000199887	retained_intron		5	1	129501246	3398
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000125926	processed_transcript		16	-1	22162992	487
ENSMUSG00000101617	processed_pseudogene	Gm6947	ENSMUST00000186254	processed_pseudogene		1	-1	71493814	78
ENSMUSG00000033581	protein_coding	Igf2bp2	ENSMUST00000127696	retained_intron		16	-1	22162975	616
ENSMUSG00000112847	TEC	Gm47573	ENSMUST00000218999	TEC		10	1	82164247	2538
ENSMUSG00000021097	protein_coding	Clmn	ENSMUST00000222412	processed_transcript		12	-1	104859742	722
ENSMUSG00000031921	protein_coding	Terf2	ENSMUST00000068388	protein_coding	alternative2	8	-1	107096514	1915
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000136663	protein_coding		11	1	70601989	4367
ENSMUSG00000066149	protein_coding	Cdc26	ENSMUST00000107459	protein_coding	principal1	4	-1	62408625	654
ENSMUSG00000111168	processed_pseudogene	Gm48468	ENSMUST00000215976	processed_pseudogene		11	-1	83136817	94
ENSMUSG00000111480	processed_pseudogene	Gm48469	ENSMUST00000214610	processed_pseudogene		11	-1	83148505	94
ENSMUSG00000019907	protein_coding	Ppp1r12a	ENSMUST00000218161	retained_intron		10	1	108253110	5066
ENSMUSG00000066149	protein_coding	Cdc26	ENSMUST00000156854	retained_intron		4	-1	62405514	3143
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000178764	protein_coding		11	1	70604200	777
ENSMUSG00000107850	processed_pseudogene	Gm4714	ENSMUST00000203395	processed_pseudogene		6	-1	136695283	279
ENSMUSG00000019907	protein_coding	Ppp1r12a	ENSMUST00000219653	retained_intron		10	1	108267097	563
ENSMUSG00000112110	lincRNA	Gm15608	ENSMUST00000156803	lincRNA		10	1	82178235	764
ENSMUSG00000019907	protein_coding	Ppp1r12a	ENSMUST00000219559	processed_transcript		10	1	108268570	541
ENSMUSG00000112110	lincRNA	Gm15608	ENSMUST00000217860	lincRNA		10	1	82178372	540
ENSMUSG00000066900	protein_coding	Suds3	ENSMUST00000086471	protein_coding	principal3	5	-1	117115998	2425
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000149845	nonsense_mediated_decay		11	1	70604223	704
ENSMUSG00000110941	processed_pseudogene	Gm48477	ENSMUST00000217640	processed_pseudogene		11	-1	83160172	94
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000153503	retained_intron		11	1	70606701	635
ENSMUSG00000108218	transcribed_unprocessed_pseudogene	Olfr1372-ps1	ENSMUST00000203403	processed_transcript		11	-1	52168159	9812
ENSMUSG00000108218	transcribed_unprocessed_pseudogene	Olfr1372-ps1	ENSMUST00000121007	transcribed_unprocessed_pseudogene		11	-1	52156283	934
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000152857	retained_intron		11	1	70607812	697
ENSMUSG00000031921	protein_coding	Terf2	ENSMUST00000116425	protein_coding		8	-1	107096547	2471
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000142650	retained_intron		11	1	70609738	693
ENSMUSG00000066900	protein_coding	Suds3	ENSMUST00000202713	retained_intron		5	-1	117104401	9778
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000031024	protein_coding	principal1	5	1	31613939	478
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000199925	processed_transcript		5	1	129501251	5127
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000132208	retained_intron		11	1	70610051	650
ENSMUSG00000062931	protein_coding	Zfp938	ENSMUST00000041264	protein_coding	principal1	10	-1	82241273	2035
ENSMUSG00000037977	protein_coding	6430571L13Rik	ENSMUST00000042581	protein_coding	principal1	9	1	107340602	2599
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000043794	protein_coding	principal2	5	1	37050857	2383
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000200500	nonsense_mediated_decay		5	1	129501449	437
ENSMUSG00000031921	protein_coding	Terf2	ENSMUST00000141205	retained_intron		8	-1	107079875	1188
ENSMUSG00000062931	protein_coding	Zfp938	ENSMUST00000156218	nonsense_mediated_decay		10	-1	82241280	2124
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000152445	retained_intron		5	1	37050916	2067
ENSMUSG00000031921	protein_coding	Terf2	ENSMUST00000155834	retained_intron		8	-1	107081441	391
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000198423	TEC		5	1	129502394	655
ENSMUSG00000111152	processed_pseudogene	Gm48490	ENSMUST00000213855	processed_pseudogene		11	-1	83171842	94
ENSMUSG00000037977	protein_coding	6430571L13Rik	ENSMUST00000135520	processed_transcript		9	1	107348130	468
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000202655	processed_transcript		5	1	31613956	360
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000198836	processed_transcript		5	1	129503159	692
ENSMUSG00000031921	protein_coding	Terf2	ENSMUST00000136178	retained_intron		8	-1	107083217	415
ENSMUSG00000018479	protein_coding	1700125H20Rik	ENSMUST00000100681	protein_coding		11	1	85170404	687
ENSMUSG00000066900	protein_coding	Suds3	ENSMUST00000166397	protein_coding	alternative2	5	-1	117116113	1694
ENSMUSG00000111930	processed_pseudogene	Gm47382	ENSMUST00000219873	processed_pseudogene		10	-1	82266874	151
ENSMUSG00000026971	protein_coding	Itgb6	ENSMUST00000059888	protein_coding	principal1	2	-1	60673711	4806
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000196147	retained_intron		5	1	129503974	305
ENSMUSG00000020827	protein_coding	Mink1	ENSMUST00000072237	protein_coding	alternative2	11	1	70562881	4994
ENSMUSG00000031921	protein_coding	Terf2	ENSMUST00000068421	protein_coding	alternative2	8	-1	107096545	2667
ENSMUSG00000066900	protein_coding	Suds3	ENSMUST00000202684	retained_intron		5	-1	117098811	577
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000200662	retained_intron		5	1	129504341	725
ENSMUSG00000050471	protein_coding	Fam118b	ENSMUST00000063782	protein_coding		9	-1	35267780	1662
ENSMUSG00000003477	protein_coding	Inmt	ENSMUST00000003569	protein_coding	principal1	6	-1	55175043	1077
ENSMUSG00000044581	protein_coding	4932415D10Rik	ENSMUST00000217661	protein_coding	principal1	10	-1	82316582	15111
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000202243	processed_transcript		5	1	31613972	839
ENSMUSG00000081062	processed_pseudogene	Gm13640	ENSMUST00000118445	processed_pseudogene		2	1	73809162	264
ENSMUSG00000044581	protein_coding	4932415D10Rik	ENSMUST00000171401	protein_coding		10	-1	82285278	3163
ENSMUSG00000049604	protein_coding	Hoxb13	ENSMUST00000062709	protein_coding	principal1	11	1	96194316	2206
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000199215	nonsense_mediated_decay		5	1	129541416	559
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000121010	protein_coding	alternative1	5	1	37085370	2496
ENSMUSG00000066900	protein_coding	Suds3	ENSMUST00000200684	retained_intron		5	-1	117113551	914
ENSMUSG00000042279	protein_coding	H1f8	ENSMUST00000037831	protein_coding	principal3	6	1	115944938	1113
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000174629	protein_coding		5	1	37085370	1941
ENSMUSG00000066900	protein_coding	Suds3	ENSMUST00000201287	retained_intron		5	-1	117109862	215
ENSMUSG00000108162	processed_pseudogene	Gm20589	ENSMUST00000204099	processed_pseudogene		6	-1	113355165	2530
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000201223	retained_intron		5	1	37091080	950
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000212047	protein_coding		5	1	37113527	1191
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000198266	retained_intron		5	1	129548941	2107
ENSMUSG00000048148	protein_coding	Nwd1	ENSMUST00000161386	retained_intron		8	1	72646711	3826
ENSMUSG00000003477	protein_coding	Inmt	ENSMUST00000152720	retained_intron		6	-1	55175014	919
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000199394	processed_transcript		5	1	129550778	426
ENSMUSG00000001281	protein_coding	Itgb7	ENSMUST00000229440	protein_coding		15	-1	102217073	455
ENSMUSG00000018479	protein_coding	1700125H20Rik	ENSMUST00000018623	protein_coding	principal1	11	1	85171096	966
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000199692	retained_intron		5	1	129560159	1277
ENSMUSG00000042279	protein_coding	H1f8	ENSMUST00000162084	nonsense_mediated_decay		6	1	115944938	1192
ENSMUSG00000086047	antisense	9530046B11Rik	ENSMUST00000149413	antisense		5	1	117115218	1157
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000201910	nonsense_mediated_decay		5	1	31613985	2178
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000126527	retained_intron		5	1	37122975	516
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000195961	retained_intron		5	1	129560500	680
ENSMUSG00000102656	IG_V_pseudogene	Ighv1-32	ENSMUST00000195149	IG_V_pseudogene		12	-1	114835656	351
ENSMUSG00000029439	protein_coding	Sfswap	ENSMUST00000196873	retained_intron		5	1	129570717	668
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000201620	retained_intron		5	1	31614013	2741
ENSMUSG00000063646	protein_coding	Jakmip1	ENSMUST00000208852	protein_coding		5	1	37141640	1829
ENSMUSG00000081948	protein_coding	Olfr1191-ps1	ENSMUST00000217379	protein_coding	principal1	2	1	88640542	5933
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000201483	processed_transcript		5	1	31614017	638
ENSMUSG00000097686	antisense	Gm26647	ENSMUST00000180816	antisense		5	-1	37041646	1255
ENSMUSG00000081948	protein_coding	Olfr1191-ps1	ENSMUST00000120598	protein_coding	principal1	2	1	88640597	4677
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000201923	retained_intron		5	1	31614152	773
ENSMUSG00000021939	protein_coding	Ctsb	ENSMUST00000006235	protein_coding	principal1	14	1	63122462	4743
ENSMUSG00000117286	protein_coding	Gm1043	ENSMUST00000232332	protein_coding	principal1	5	1	37085370	9331
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000201719	processed_transcript		5	1	31654625	526
ENSMUSG00000111590	protein_coding	Olfr1192-ps1	ENSMUST00000217373	processed_transcript		2	1	88648509	6653
ENSMUSG00000111590	protein_coding	Olfr1192-ps1	ENSMUST00000216512	processed_transcript		2	1	88648551	6348
ENSMUSG00000042279	protein_coding	H1f8	ENSMUST00000161969	protein_coding	alternative2	6	1	115944938	1122
ENSMUSG00000117286	protein_coding	Gm1043	ENSMUST00000213782	retained_intron		5	1	37162849	2878
ENSMUSG00000050471	protein_coding	Fam118b	ENSMUST00000121564	protein_coding	principal1	9	-1	35267777	1962
ENSMUSG00000117286	protein_coding	Gm1043	ENSMUST00000208827	protein_coding		5	1	37175490	1284
ENSMUSG00000117286	protein_coding	Gm1043	ENSMUST00000207619	protein_coding		5	1	37175508	1114
ENSMUSG00000031671	protein_coding	Setd6	ENSMUST00000034096	protein_coding	principal1	8	1	95715881	1707
ENSMUSG00000021939	protein_coding	Ctsb	ENSMUST00000225639	retained_intron		14	1	63122514	1269
ENSMUSG00000111590	protein_coding	Olfr1192-ps1	ENSMUST00000120518	protein_coding	principal1	2	1	88648694	2738
ENSMUSG00000042279	protein_coding	H1f8	ENSMUST00000161617	protein_coding		6	1	115944953	785
ENSMUSG00000106918	protein_coding	Mrpl33	ENSMUST00000202690	processed_transcript		5	1	31655496	842
ENSMUSG00000050471	protein_coding	Fam118b	ENSMUST00000059057	protein_coding	principal1	9	-1	35267805	1860
ENSMUSG00000117286	protein_coding	Gm1043	ENSMUST00000094840	retained_intron		5	1	37185897	1576
ENSMUSG00000042279	protein_coding	H1f8	ENSMUST00000205177	protein_coding		6	1	115948757	520
ENSMUSG00000021939	protein_coding	Ctsb	ENSMUST00000225540	retained_intron		14	1	63135518	801
ENSMUSG00000113373	protein_coding	Jakmip1	ENSMUST00000212997	protein_coding	principal1	5	1	37113784	138
ENSMUSG00000102231	TEC	1700074A21Rik	ENSMUST00000192404	TEC		1	-1	37299697	346
ENSMUSG00000105617	processed_transcript	Gm43809	ENSMUST00000200694	processed_transcript		5	1	31596938	338
ENSMUSG00000107957	processed_pseudogene	Gm44088	ENSMUST00000204595	processed_pseudogene		6	1	62630581	237
ENSMUSG00000108745	processed_pseudogene	Gm17908	ENSMUST00000205552	processed_pseudogene		7	1	65170642	1256
ENSMUSG00000117150	processed_pseudogene	Gm9351	ENSMUST00000233861	processed_pseudogene		17	-1	74332529	522
ENSMUSG00000031671	protein_coding	Setd6	ENSMUST00000154052	processed_transcript		8	1	95715915	520
ENSMUSG00000050471	protein_coding	Fam118b	ENSMUST00000133739	protein_coding		9	-1	35235445	917
ENSMUSG00000105617	processed_transcript	Gm43809	ENSMUST00000202033	processed_transcript		5	1	31613972	304
ENSMUSG00000108174	processed_pseudogene	Gm44092	ENSMUST00000204470	processed_pseudogene		6	1	62756797	258
ENSMUSG00000108445	processed_pseudogene	Gm17918	ENSMUST00000205315	processed_pseudogene		7	-1	65174191	574
ENSMUSG00000030246	protein_coding	Ldhb	ENSMUST00000130817	protein_coding		6	-1	142495648	437
ENSMUSG00000031671	protein_coding	Setd6	ENSMUST00000126888	retained_intron		8	1	95716162	763
ENSMUSG00000050471	protein_coding	Fam118b	ENSMUST00000217306	protein_coding		9	-1	35267755	620
ENSMUSG00000108587	lincRNA	1810049I09Rik	ENSMUST00000206760	lincRNA		7	-1	65213369	556
ENSMUSG00000026971	protein_coding	Itgb6	ENSMUST00000112517	protein_coding		2	-1	60722643	3537
ENSMUSG00000031671	protein_coding	Setd6	ENSMUST00000141900	nonsense_mediated_decay		8	1	95716611	378
ENSMUSG00000050471	protein_coding	Fam118b	ENSMUST00000125087	protein_coding		9	-1	35267767	918
ENSMUSG00000050471	protein_coding	Fam118b	ENSMUST00000214230	nonsense_mediated_decay		9	-1	35244663	682
ENSMUSG00000031671	protein_coding	Setd6	ENSMUST00000148727	protein_coding		8	1	95716620	386
ENSMUSG00000108587	lincRNA	1810049I09Rik	ENSMUST00000205499	lincRNA		7	-1	65213429	453
ENSMUSG00000029674	protein_coding	Limk1	ENSMUST00000015137	protein_coding	principal1	5	-1	134688598	3331
ENSMUSG00000050471	protein_coding	Fam118b	ENSMUST00000147256	retained_intron		9	-1	35267780	3476
ENSMUSG00000050471	protein_coding	Fam118b	ENSMUST00000125124	retained_intron		9	-1	35267780	840
ENSMUSG00000023923	protein_coding	Tbc1d5	ENSMUST00000224977	processed_transcript		17	-1	51159378	5578
ENSMUSG00000031671	protein_coding	Setd6	ENSMUST00000154593	processed_transcript		8	1	95717009	774
ENSMUSG00000020198	protein_coding	Ap3d1	ENSMUST00000020420	protein_coding	principal1	10	-1	80742264	4805
ENSMUSG00000023923	protein_coding	Tbc1d5	ENSMUST00000224528	protein_coding	alternative2	17	-1	51179311	4764
ENSMUSG00000106554	lincRNA	Gm33474	ENSMUST00000199486	lincRNA		5	1	107048836	1231
ENSMUSG00000029674	protein_coding	Limk1	ENSMUST00000111233	protein_coding		5	-1	134678248	3109
ENSMUSG00000023923	protein_coding	Tbc1d5	ENSMUST00000225252	retained_intron		17	-1	51179352	4150
ENSMUSG00000097772	lincRNA	5430416N02Rik	ENSMUST00000181873	lincRNA		5	-1	100429535	626
ENSMUSG00000020198	protein_coding	Ap3d1	ENSMUST00000219816	retained_intron		10	-1	80709058	858
ENSMUSG00000023923	protein_coding	Tbc1d5	ENSMUST00000223979	retained_intron		17	-1	51179243	2508
ENSMUSG00000026971	protein_coding	Itgb6	ENSMUST00000151035	processed_transcript		2	-1	60673754	1107
ENSMUSG00000097772	lincRNA	5430416N02Rik	ENSMUST00000180779	lincRNA		5	-1	100429516	3486
ENSMUSG00000023923	protein_coding	Tbc1d5	ENSMUST00000223758	retained_intron		17	-1	51179335	2131
ENSMUSG00000097772	lincRNA	5430416N02Rik	ENSMUST00000196399	lincRNA		5	-1	100429375	553
ENSMUSG00000026971	protein_coding	Itgb6	ENSMUST00000154764	protein_coding		2	-1	60673726	2410
ENSMUSG00000097772	lincRNA	5430416N02Rik	ENSMUST00000198522	lincRNA		5	-1	100429515	435
ENSMUSG00000029674	protein_coding	Limk1	ENSMUST00000134093	nonsense_mediated_decay		5	-1	134678220	3473
ENSMUSG00000020198	protein_coding	Ap3d1	ENSMUST00000218610	nonsense_mediated_decay		10	-1	80710790	786
ENSMUSG00000023923	protein_coding	Tbc1d5	ENSMUST00000224547	processed_transcript		17	-1	51179289	1270
ENSMUSG00000023923	protein_coding	Tbc1d5	ENSMUST00000224123	processed_transcript		17	-1	50984626	486
ENSMUSG00000029674	protein_coding	Limk1	ENSMUST00000138590	protein_coding		5	-1	134664205	322
ENSMUSG00000023923	protein_coding	Tbc1d5	ENSMUST00000225473	retained_intron		17	-1	51179294	3429
ENSMUSG00000026971	protein_coding	Itgb6	ENSMUST00000145009	processed_transcript		2	-1	60673703	249
ENSMUSG00000020198	protein_coding	Ap3d1	ENSMUST00000218125	retained_intron		10	-1	80718986	3728
ENSMUSG00000060121	protein_coding	Gemin2	ENSMUST00000021379	protein_coding	principal1	12	1	59013393	1588
ENSMUSG00000029674	protein_coding	Limk1	ENSMUST00000137897	retained_intron		5	-1	134668419	3050
ENSMUSG00000026971	protein_coding	Itgb6	ENSMUST00000133887	processed_transcript		2	-1	60673693	1487
ENSMUSG00000046643	protein_coding	Olfr218	ENSMUST00000216603	protein_coding	principal1	1	1	173197808	3623
ENSMUSG00000029674	protein_coding	Limk1	ENSMUST00000132027	retained_intron		5	-1	134688574	1801
ENSMUSG00000020198	protein_coding	Ap3d1	ENSMUST00000220183	retained_intron		10	-1	80721190	422
ENSMUSG00000046643	protein_coding	Olfr218	ENSMUST00000215844	protein_coding	principal1	1	1	173197829	3410
ENSMUSG00000026971	protein_coding	Itgb6	ENSMUST00000028348	protein_coding	principal1	2	-1	60722643	2995
ENSMUSG00000030327	protein_coding	Necap1	ENSMUST00000032477	protein_coding	principal1	6	1	122874474	2476
ENSMUSG00000020198	protein_coding	Ap3d1	ENSMUST00000219253	retained_intron		10	-1	80720160	668
ENSMUSG00000000204	protein_coding	Slfn4	ENSMUST00000000208	protein_coding	principal1	11	1	83175186	3958
ENSMUSG00000060121	protein_coding	Gemin2	ENSMUST00000182188	retained_intron		12	1	59013454	1946
ENSMUSG00000046643	protein_coding	Olfr218	ENSMUST00000057548	protein_coding	principal1	1	1	173203358	942
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000036355	protein_coding	principal3	16	-1	45844378	5483
ENSMUSG00000083951	processed_pseudogene	Gm13786	ENSMUST00000122371	processed_pseudogene		2	1	92233105	333
ENSMUSG00000030327	protein_coding	Necap1	ENSMUST00000203715	processed_transcript		6	1	122874549	665
ENSMUSG00000026971	protein_coding	Itgb6	ENSMUST00000147906	processed_transcript		2	-1	60705601	236
ENSMUSG00000060121	protein_coding	Gemin2	ENSMUST00000182710	retained_intron		12	1	59024666	658
ENSMUSG00000081730	processed_pseudogene	Gm13785	ENSMUST00000119099	processed_pseudogene		2	1	92312154	690
ENSMUSG00000020198	protein_coding	Ap3d1	ENSMUST00000219356	nonsense_mediated_decay		10	-1	80741971	766
ENSMUSG00000000204	protein_coding	Slfn4	ENSMUST00000215472	protein_coding		11	1	83176603	1830
ENSMUSG00000026971	protein_coding	Itgb6	ENSMUST00000142696	processed_transcript		2	-1	60705578	730
ENSMUSG00000087018	lincRNA	2900072N19Rik	ENSMUST00000123840	lincRNA		2	-1	92059369	806
ENSMUSG00000030327	protein_coding	Necap1	ENSMUST00000203394	retained_intron		6	1	122874571	638
ENSMUSG00000087197	lincRNA	Gm13780	ENSMUST00000150482	lincRNA		2	-1	92096042	1187
ENSMUSG00000073255	protein_coding	Gm14632	ENSMUST00000101654	protein_coding	principal1	X	1	30329772	864
ENSMUSG00000030327	protein_coding	Necap1	ENSMUST00000203476	retained_intron		6	1	122874581	766
ENSMUSG00000000204	protein_coding	Slfn4	ENSMUST00000167596	protein_coding	principal1	11	1	83175194	3703
ENSMUSG00000049456	protein_coding	Olfr1404	ENSMUST00000216556	protein_coding	principal1	1	1	173212392	3305
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000076333	protein_coding	alternative2	16	-1	45844234	5347
ENSMUSG00000049456	protein_coding	Olfr1404	ENSMUST00000217374	protein_coding	principal1	1	1	173212392	3686
ENSMUSG00000073255	protein_coding	Gm14632	ENSMUST00000177917	protein_coding	principal1	X	1	30331337	639
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000131003	protein_coding		16	-1	45801571	2328
ENSMUSG00000085989	lincRNA	Gm7437	ENSMUST00000156744	lincRNA		X	1	30373539	661
ENSMUSG00000049456	protein_coding	Olfr1404	ENSMUST00000056592	protein_coding	principal1	1	1	173215607	1034
ENSMUSG00000048148	protein_coding	Nwd1	ENSMUST00000161557	nonsense_mediated_decay		8	1	72646722	4301
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000160235	retained_intron		2	1	92184302	601
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000134802	protein_coding		16	-1	45953598	3612
ENSMUSG00000001281	protein_coding	Itgb7	ENSMUST00000001327	protein_coding	principal1	15	-1	102231944	2683
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000151300	processed_transcript		16	-1	45772283	664
ENSMUSG00000085325	lincRNA	Gm14974	ENSMUST00000150003	lincRNA		X	-1	30621265	677
ENSMUSG00000001281	protein_coding	Itgb7	ENSMUST00000230550	retained_intron		15	-1	102216650	449
ENSMUSG00000085325	lincRNA	Gm14974	ENSMUST00000139112	lincRNA		X	-1	30621275	804
ENSMUSG00000024026	protein_coding	Glo1	ENSMUST00000236335	protein_coding	principal1	17	-1	30612659	9865
ENSMUSG00000001281	protein_coding	Itgb7	ENSMUST00000230652	protein_coding		15	-1	102231908	358
ENSMUSG00000030865	protein_coding	Chp2	ENSMUST00000033152	protein_coding	principal1	7	1	122219496	1456
ENSMUSG00000025069	protein_coding	Gsto2	ENSMUST00000235896	protein_coding	alternative2	19	1	47865534	1174
ENSMUSG00000048578	protein_coding	Mlec	ENSMUST00000112121	protein_coding	principal1	5	-1	115158179	5955
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000133111	retained_intron		16	-1	45789229	614
ENSMUSG00000001281	protein_coding	Itgb7	ENSMUST00000127014	protein_coding		15	-1	102231935	406
ENSMUSG00000030865	protein_coding	Chp2	ENSMUST00000160828	processed_transcript		7	1	122221573	332
ENSMUSG00000084385	processed_pseudogene	Gm13873	ENSMUST00000119208	processed_pseudogene		2	-1	103232964	427
ENSMUSG00000101599	lincRNA	Gm20342	ENSMUST00000185480	lincRNA		1	1	63117118	9720
ENSMUSG00000108708	processed_pseudogene	Gm29977	ENSMUST00000206804	processed_pseudogene		7	-1	122250025	724
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000142697	processed_transcript		16	-1	45791447	467
ENSMUSG00000048578	protein_coding	Mlec	ENSMUST00000124678	processed_transcript		5	-1	115151046	505
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000136405	protein_coding		16	-1	45953493	595
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000190095	retained_intron		1	-1	63144961	1366
ENSMUSG00000056091	protein_coding	St3gal5	ENSMUST00000069994	protein_coding		6	1	72097592	2258
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000125433	processed_transcript		16	-1	45844343	343
ENSMUSG00000027193	protein_coding	Api5	ENSMUST00000028617	protein_coding	principal1	2	-1	94438136	3736
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000128365	processed_transcript		16	-1	45901967	831
ENSMUSG00000033149	protein_coding	Phldb2	ENSMUST00000136317	processed_transcript		16	-1	45953533	497
ENSMUSG00000041992	protein_coding	Rapgef5	ENSMUST00000109691	protein_coding	principal1	12	1	117516479	6746
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000159727	protein_coding		2	1	92320429	554
ENSMUSG00000024026	protein_coding	Glo1	ENSMUST00000235873	retained_intron		17	-1	30597539	1492
ENSMUSG00000030607	protein_coding	Acan	ENSMUST00000032835	protein_coding	principal1	7	1	79053483	7355
ENSMUSG00000024026	protein_coding	Glo1	ENSMUST00000024823	nonsense_mediated_decay		17	-1	30612612	2024
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000106244	protein_coding	principal1	11	1	119491347	5070
ENSMUSG00000084865	antisense	Gm15723	ENSMUST00000139331	antisense		10	1	114801726	600
ENSMUSG00000027193	protein_coding	Api5	ENSMUST00000144390	processed_transcript		2	-1	94437968	1308
ENSMUSG00000085781	antisense	Gm15640	ENSMUST00000152070	antisense		16	1	45936323	527
ENSMUSG00000041992	protein_coding	Rapgef5	ENSMUST00000220781	protein_coding		12	1	117533888	1078
ENSMUSG00000027193	protein_coding	Api5	ENSMUST00000152454	retained_intron		2	-1	94438136	1659
ENSMUSG00000024026	protein_coding	Glo1	ENSMUST00000236619	nonsense_mediated_decay		17	-1	30626809	1196
ENSMUSG00000030607	protein_coding	Acan	ENSMUST00000206779	protein_coding		7	1	79099751	2596
ENSMUSG00000027193	protein_coding	Api5	ENSMUST00000150930	processed_transcript		2	-1	94431988	730
ENSMUSG00000041992	protein_coding	Rapgef5	ENSMUST00000221225	processed_transcript		12	1	117595241	457
ENSMUSG00000081476	processed_pseudogene	Itpa-ps1	ENSMUST00000117207	processed_pseudogene		2	-1	94385098	597
ENSMUSG00000041992	protein_coding	Rapgef5	ENSMUST00000222105	protein_coding		12	1	117658034	2677
ENSMUSG00000041992	protein_coding	Rapgef5	ENSMUST00000222185	protein_coding		12	1	117688836	5508
ENSMUSG00000025069	protein_coding	Gsto2	ENSMUST00000120645	protein_coding	principal2	19	1	47865545	1277
ENSMUSG00000041992	protein_coding	Rapgef5	ENSMUST00000223040	retained_intron		12	1	117688956	2621
ENSMUSG00000041992	protein_coding	Rapgef5	ENSMUST00000222035	retained_intron		12	1	117740595	2780
ENSMUSG00000113840	processed_pseudogene	Gm18955	ENSMUST00000223173	processed_pseudogene		12	1	117723972	649
ENSMUSG00000056091	protein_coding	St3gal5	ENSMUST00000114112	protein_coding	principal1	6	1	72097623	2439
ENSMUSG00000024026	protein_coding	Glo1	ENSMUST00000235547	protein_coding	principal1	17	-1	30626871	1127
ENSMUSG00000024026	protein_coding	Glo1	ENSMUST00000236995	nonsense_mediated_decay		17	-1	30612597	1764
ENSMUSG00000113575	sense_intronic	A930023M06Rik	ENSMUST00000223270	sense_intronic		12	1	117602039	1093
ENSMUSG00000025069	protein_coding	Gsto2	ENSMUST00000237514	protein_coding	alternative2	19	1	47865580	1118
ENSMUSG00000045464	processed_transcript	2810002D19Rik	ENSMUST00000152313	processed_transcript		2	1	94406151	2040
ENSMUSG00000056091	protein_coding	St3gal5	ENSMUST00000187007	protein_coding		6	1	72097757	664
ENSMUSG00000030316	protein_coding	Tamm41	ENSMUST00000032461	protein_coding	principal1	6	-1	115037876	1168
ENSMUSG00000087141	protein_coding	Plcxd2	ENSMUST00000130481	protein_coding	principal1	16	-1	46010218	7140
ENSMUSG00000056091	protein_coding	St3gal5	ENSMUST00000188366	protein_coding		6	1	72115232	516
ENSMUSG00000025069	protein_coding	Gsto2	ENSMUST00000056159	protein_coding	principal2	19	1	47865767	1351
ENSMUSG00000024026	protein_coding	Glo1	ENSMUST00000235171	protein_coding		17	-1	30612602	898
ENSMUSG00000025069	protein_coding	Gsto2	ENSMUST00000235857	nonsense_mediated_decay		19	1	47865777	1000
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000075301	protein_coding	alternative2	2	-1	52335134	21456
ENSMUSG00000030316	protein_coding	Tamm41	ENSMUST00000137654	retained_intron		6	-1	115012537	575
ENSMUSG00000025069	protein_coding	Gsto2	ENSMUST00000236449	processed_transcript		19	1	47865788	685
ENSMUSG00000024026	protein_coding	Glo1	ENSMUST00000237343	retained_intron		17	-1	30612569	896
ENSMUSG00000025069	protein_coding	Gsto2	ENSMUST00000238084	protein_coding	alternative2	19	1	47865826	1174
ENSMUSG00000085826	antisense	Gm15638	ENSMUST00000154775	antisense		16	1	45945606	2945
ENSMUSG00000030316	protein_coding	Tamm41	ENSMUST00000144969	retained_intron		6	-1	115016375	3132
ENSMUSG00000024026	protein_coding	Glo1	ENSMUST00000237063	processed_transcript		17	-1	30602355	238
ENSMUSG00000025069	protein_coding	Gsto2	ENSMUST00000237607	processed_transcript		19	1	47867641	539
ENSMUSG00000030316	protein_coding	Tamm41	ENSMUST00000172495	nonsense_mediated_decay		6	-1	115032264	529
ENSMUSG00000024026	protein_coding	Glo1	ENSMUST00000167624	protein_coding	principal1	17	-1	30612659	895
ENSMUSG00000085826	antisense	Gm15638	ENSMUST00000128159	antisense		16	1	45945613	2062
ENSMUSG00000025069	protein_coding	Gsto2	ENSMUST00000135016	protein_coding	principal2	19	1	47870262	1145
ENSMUSG00000030316	protein_coding	Tamm41	ENSMUST00000174848	protein_coding		6	-1	115037855	736
ENSMUSG00000085826	antisense	Gm15638	ENSMUST00000134359	antisense		16	1	45945618	471
ENSMUSG00000118284	lincRNA	Gm41562	ENSMUST00000236151	lincRNA		17	1	30945893	1316
ENSMUSG00000104491	processed_pseudogene	Gm32340	ENSMUST00000192883	processed_pseudogene		3	-1	45776191	259
ENSMUSG00000104511	processed_pseudogene	Gm18843	ENSMUST00000194982	processed_pseudogene		3	1	46413402	719
ENSMUSG00000030316	protein_coding	Tamm41	ENSMUST00000154621	nonsense_mediated_decay		6	-1	115037825	724
ENSMUSG00000118341	processed_transcript	Gm50252	ENSMUST00000235858	processed_transcript		17	-1	30923831	1528
ENSMUSG00000030316	protein_coding	Tamm41	ENSMUST00000112975	retained_intron		6	-1	115037876	1207
ENSMUSG00000030316	protein_coding	Tamm41	ENSMUST00000144445	processed_transcript		6	-1	115032265	531
ENSMUSG00000070870	protein_coding	Cryge	ENSMUST00000087359	protein_coding	principal1	1	-1	65051149	631
ENSMUSG00000070870	protein_coding	Cryge	ENSMUST00000161960	protein_coding		1	-1	65051119	690
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000238288	protein_coding	alternative2	2	-1	52335762	23256
ENSMUSG00000030400	protein_coding	Ercc2	ENSMUST00000062831	protein_coding	principal1	7	1	19382010	3578
ENSMUSG00000090919	protein_coding	Pabpc4l	ENSMUST00000192793	protein_coding	principal1	3	-1	46448219	5252
ENSMUSG00000075307	protein_coding	Klhl41	ENSMUST00000100050	protein_coding	principal1	2	1	69670120	2529
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000056433	protein_coding	principal1	2	1	31152316	6134
ENSMUSG00000118657	unprocessed_pseudogene	AL606917.1	ENSMUST00000239455	unprocessed_pseudogene		4	-1	123307217	118
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000238749	protein_coding	alternative2	2	-1	52335762	23361
ENSMUSG00000039954	protein_coding	Stk32a	ENSMUST00000045477	protein_coding	principal1	18	1	43207583	5080
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000153032	retained_intron		2	1	31152333	683
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000194084	retained_intron		2	1	31152351	3251
ENSMUSG00000090919	protein_coding	Pabpc4l	ENSMUST00000195436	protein_coding		3	-1	46447941	723
ENSMUSG00000109465	processed_pseudogene	Gm19032	ENSMUST00000208584	processed_pseudogene		7	1	61882972	592
ENSMUSG00000039954	protein_coding	Stk32a	ENSMUST00000237797	protein_coding		18	1	43207677	4896
ENSMUSG00000030400	protein_coding	Ercc2	ENSMUST00000136055	processed_transcript		7	1	19382018	311
ENSMUSG00000099474	bidirectional_promoter_lncRNA	1700097N02Rik	ENSMUST00000188852	bidirectional_promoter_lncRNA		17	-1	30626905	845
ENSMUSG00000039954	protein_coding	Stk32a	ENSMUST00000236899	protein_coding		18	1	43243040	350
ENSMUSG00000030400	protein_coding	Ercc2	ENSMUST00000108461	protein_coding		7	1	19382031	2799
ENSMUSG00000090919	protein_coding	Pabpc4l	ENSMUST00000195537	protein_coding		3	-1	46447920	467
ENSMUSG00000090919	protein_coding	Pabpc4l	ENSMUST00000166505	protein_coding	principal1	3	-1	46447941	5218
ENSMUSG00000039954	protein_coding	Stk32a	ENSMUST00000235682	retained_intron		18	1	43258604	3277
ENSMUSG00000030400	protein_coding	Ercc2	ENSMUST00000108460	protein_coding		7	1	19382040	3485
ENSMUSG00000109394	lincRNA	A230057D06Rik	ENSMUST00000208953	lincRNA		7	-1	61829422	3357
ENSMUSG00000117725	antisense	Gm50240	ENSMUST00000235695	antisense		17	1	30576300	6295
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000137410	processed_transcript		2	-1	52157912	1599
ENSMUSG00000117725	antisense	Gm50240	ENSMUST00000236802	antisense		17	1	30576358	1047
ENSMUSG00000030246	protein_coding	Ldhb	ENSMUST00000239395	protein_coding		6	-1	142507957	1304
ENSMUSG00000030400	protein_coding	Ercc2	ENSMUST00000127363	processed_transcript		7	1	19382208	607
ENSMUSG00000030246	protein_coding	Ldhb	ENSMUST00000032373	protein_coding	principal1	6	-1	142507957	1304
ENSMUSG00000117725	antisense	Gm50240	ENSMUST00000237645	antisense		17	1	30576468	500
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000135200	protein_coding		2	-1	52176614	2303
ENSMUSG00000030400	protein_coding	Ercc2	ENSMUST00000129249	protein_coding		7	1	19382269	2071
ENSMUSG00000050663	protein_coding	Trhde	ENSMUST00000239411	protein_coding	alternative2	10	-1	114802302	6652
ENSMUSG00000041907	protein_coding	Gpr45	ENSMUST00000188621	processed_transcript		1	1	42952872	2046
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000152851	processed_transcript		2	-1	52163009	689
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000131236	processed_transcript		2	-1	52176037	2374
ENSMUSG00000109394	lincRNA	A230057D06Rik	ENSMUST00000231418	lincRNA		7	-1	61925420	1991
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000148356	protein_coding		2	-1	52192520	1027
ENSMUSG00000030400	protein_coding	Ercc2	ENSMUST00000128167	processed_transcript		7	1	19388203	684
ENSMUSG00000050663	protein_coding	Trhde	ENSMUST00000152702	retained_intron		10	-1	114802307	3557
ENSMUSG00000109394	lincRNA	A230057D06Rik	ENSMUST00000208961	lincRNA		7	-1	61911402	3029
ENSMUSG00000109394	lincRNA	A230057D06Rik	ENSMUST00000232435	lincRNA		7	-1	61928195	1715
ENSMUSG00000050663	protein_coding	Trhde	ENSMUST00000152282	retained_intron		10	-1	114801370	1574
ENSMUSG00000030400	protein_coding	Ercc2	ENSMUST00000129291	retained_intron		7	1	19390396	485
ENSMUSG00000030246	protein_coding	Ldhb	ENSMUST00000204433	protein_coding		6	-1	142501387	783
ENSMUSG00000109394	lincRNA	A230057D06Rik	ENSMUST00000207061	lincRNA		7	-1	61928690	3717
ENSMUSG00000033027	protein_coding	Klrc3	ENSMUST00000203189	nonsense_mediated_decay		6	-1	129643337	686
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000139672	protein_coding		2	-1	52256156	3570
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000172422	retained_intron		2	1	31152351	1534
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000210179	protein_coding		2	-1	52367530	1825
ENSMUSG00000030400	protein_coding	Ercc2	ENSMUST00000135693	retained_intron		7	1	19393430	994
ENSMUSG00000030246	protein_coding	Ldhb	ENSMUST00000134191	protein_coding		6	-1	142507805	867
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000209712	protein_coding		2	-1	52378474	1004
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000153204	nonsense_mediated_decay		11	1	119491374	1099
ENSMUSG00000041907	protein_coding	Gpr45	ENSMUST00000179766	protein_coding	principal1	1	1	42952963	3776
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000151991	processed_transcript		2	1	31172267	617
ENSMUSG00000030400	protein_coding	Ercc2	ENSMUST00000145039	retained_intron		7	1	19393661	286
ENSMUSG00000024999	protein_coding	Noc3l	ENSMUST00000025963	protein_coding	principal1	19	-1	38819237	3977
ENSMUSG00000050663	protein_coding	Trhde	ENSMUST00000061632	protein_coding	principal2	10	-1	114801370	5722
ENSMUSG00000097231	antisense	Gm26852	ENSMUST00000180691	antisense		7	-1	19392718	5751
ENSMUSG00000030246	protein_coding	Ldhb	ENSMUST00000239397	protein_coding	principal1	6	-1	142507943	1287
ENSMUSG00000008318	protein_coding	Relt	ENSMUST00000008462	protein_coding	principal1	7	-1	100863446	2851
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000136769	processed_transcript		2	-1	52338798	582
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000127872	retained_intron		2	1	31185277	647
ENSMUSG00000026950	protein_coding	Neb	ENSMUST00000036934	protein_coding	principal2	2	-1	52338798	22489
ENSMUSG00000089934	antisense	4930473D10Rik	ENSMUST00000161975	antisense		10	1	114757747	487
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000133207	processed_transcript		2	1	31185607	230
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000143817	nonsense_mediated_decay		11	1	119491375	3101
ENSMUSG00000041907	protein_coding	Gpr45	ENSMUST00000179655	processed_transcript		1	1	42953139	1730
ENSMUSG00000041907	protein_coding	Gpr45	ENSMUST00000187998	processed_transcript		1	1	42953182	499
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000146747	retained_intron		2	1	31188769	413
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000129327	protein_coding		11	1	119491389	1184
ENSMUSG00000041907	protein_coding	Gpr45	ENSMUST00000114761	protein_coding	principal1	1	1	43032060	1546
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000149622	processed_transcript		2	1	31196896	210
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000140323	protein_coding		11	1	119491426	812
ENSMUSG00000040857	protein_coding	Erf	ENSMUST00000045847	protein_coding	principal2	7	-1	25250761	3505
ENSMUSG00000008318	protein_coding	Relt	ENSMUST00000155413	nonsense_mediated_decay		7	-1	100863406	1966
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000147099	retained_intron		2	1	31206632	2093
ENSMUSG00000000194	protein_coding	Gpr107	ENSMUST00000169333	retained_intron		2	1	31210100	794
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000154370	nonsense_mediated_decay		11	1	119491551	883
ENSMUSG00000008318	protein_coding	Relt	ENSMUST00000156855	protein_coding		7	-1	100855429	428
ENSMUSG00000008318	protein_coding	Relt	ENSMUST00000139604	protein_coding		7	-1	100856302	459
ENSMUSG00000033027	protein_coding	Klrc3	ENSMUST00000071149	protein_coding	principal2	6	-1	129643337	715
ENSMUSG00000040857	protein_coding	Erf	ENSMUST00000116343	protein_coding	alternative2	7	-1	25250730	690
ENSMUSG00000105352	lincRNA	C030018K13Rik	ENSMUST00000200615	lincRNA		5	1	64477008	617
ENSMUSG00000008318	protein_coding	Relt	ENSMUST00000136231	protein_coding		7	-1	100863158	516
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000126415	protein_coding		2	1	145934784	2256
ENSMUSG00000008318	protein_coding	Relt	ENSMUST00000142885	protein_coding		7	-1	100863398	346
ENSMUSG00000086447	antisense	Gm13522	ENSMUST00000209682	antisense		2	1	52367063	997
ENSMUSG00000086447	antisense	Gm13522	ENSMUST00000210632	antisense		2	1	52367082	873
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000118002	protein_coding		2	1	145934816	3230
ENSMUSG00000032735	protein_coding	Ablim3	ENSMUST00000166783	protein_coding	principal1	18	-1	61911823	4187
ENSMUSG00000086447	antisense	Gm13522	ENSMUST00000210726	antisense		2	1	52384748	157
ENSMUSG00000105352	lincRNA	C030018K13Rik	ENSMUST00000196527	lincRNA		5	1	64477014	866
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000106245	protein_coding		11	1	119491630	5126
ENSMUSG00000033027	protein_coding	Klrc3	ENSMUST00000170148	protein_coding	alternative2	6	-1	129643337	712
ENSMUSG00000105352	lincRNA	C030018K13Rik	ENSMUST00000196829	lincRNA		5	1	64477035	712
ENSMUSG00000086447	antisense	Gm13522	ENSMUST00000124622	antisense		2	1	52385916	455
ENSMUSG00000021277	protein_coding	Traf3	ENSMUST00000117269	protein_coding	alternative1	12	1	111166370	6972
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000138774	protein_coding		2	1	145934805	3308
ENSMUSG00000032735	protein_coding	Ablim3	ENSMUST00000049378	protein_coding	principal1	18	-1	61911824	4532
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000143670	retained_intron		11	1	119491676	683
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000134873	processed_transcript		11	1	119491785	483
ENSMUSG00000081158	processed_pseudogene	Gm13521	ENSMUST00000118922	processed_pseudogene		2	-1	52362495	866
ENSMUSG00000083175	processed_pseudogene	Gm12206	ENSMUST00000119795	processed_pseudogene		11	1	52188953	601
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000064513	protein_coding		11	1	119499511	954
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000095668	protein_coding		10	1	57631981	3311
ENSMUSG00000039850	protein_coding	Endov	ENSMUST00000132015	retained_intron		11	1	119501978	778
ENSMUSG00000029415	protein_coding	Sdad1	ENSMUST00000031364	protein_coding	principal2	5	-1	92310024	5020
ENSMUSG00000023210	protein_coding	Lcn9	ENSMUST00000023978	protein_coding	principal1	2	1	25823153	839
ENSMUSG00000060170	protein_coding	Olfr1371	ENSMUST00000075844	protein_coding	principal1	11	-1	52213987	936
ENSMUSG00000009569	protein_coding	Mrtfb	ENSMUST00000009713	protein_coding	alternative2	16	1	13256481	5815
ENSMUSG00000029415	protein_coding	Sdad1	ENSMUST00000201143	protein_coding	alternative1	5	-1	92309894	2156
ENSMUSG00000041841	protein_coding	Rpl37	ENSMUST00000045356	protein_coding	principal1	15	1	5116645	835
ENSMUSG00000079627	protein_coding	Rhox2h	ENSMUST00000184088	protein_coding		X	-1	37672869	495
ENSMUSG00000034871	protein_coding	Fam151a	ENSMUST00000047620	protein_coding	principal1	4	1	106733889	1923
ENSMUSG00000009569	protein_coding	Mrtfb	ENSMUST00000115809	protein_coding		16	1	13256506	667
ENSMUSG00000041841	protein_coding	Rpl37	ENSMUST00000227635	retained_intron		15	1	5116694	925
ENSMUSG00000029415	protein_coding	Sdad1	ENSMUST00000202903	retained_intron		5	-1	92296177	708
ENSMUSG00000081110	processed_pseudogene	Gm12745	ENSMUST00000121767	processed_pseudogene		4	1	106774816	214
ENSMUSG00000029415	protein_coding	Sdad1	ENSMUST00000201084	retained_intron		5	-1	92300333	786
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000133433	protein_coding	principal1	2	1	145934814	3998
ENSMUSG00000041841	protein_coding	Rpl37	ENSMUST00000227463	processed_transcript		15	1	5116701	556
ENSMUSG00000021277	protein_coding	Traf3	ENSMUST00000021706	protein_coding	principal3	12	1	111166463	7060
ENSMUSG00000054717	protein_coding	Hmgb2	ENSMUST00000067925	protein_coding	principal1	8	1	57511907	2628
ENSMUSG00000022210	protein_coding	Dhrs4	ENSMUST00000022821	protein_coding	principal1	14	1	55478758	1392
ENSMUSG00000041841	protein_coding	Rpl37	ENSMUST00000226758	processed_transcript		15	1	5116949	410
ENSMUSG00000002102	protein_coding	Psmc3	ENSMUST00000067663	protein_coding	principal1	2	1	91054009	1636
ENSMUSG00000079627	protein_coding	Rhox2h	ENSMUST00000115162	protein_coding	principal1	X	-1	37673277	779
ENSMUSG00000041841	protein_coding	Rpl37	ENSMUST00000227674	retained_intron		15	1	5117081	584
ENSMUSG00000029415	protein_coding	Sdad1	ENSMUST00000202604	retained_intron		5	-1	92309989	996
ENSMUSG00000054717	protein_coding	Hmgb2	ENSMUST00000210871	protein_coding		8	1	57511974	414
ENSMUSG00000022210	protein_coding	Dhrs4	ENSMUST00000227488	protein_coding		14	1	55478779	498
ENSMUSG00000009569	protein_coding	Mrtfb	ENSMUST00000149359	protein_coding	principal3	16	1	13358421	8295
ENSMUSG00000029415	protein_coding	Sdad1	ENSMUST00000201532	retained_intron		5	-1	92304659	889
ENSMUSG00000041841	protein_coding	Rpl37	ENSMUST00000227111	retained_intron		15	1	5117286	478
ENSMUSG00000021277	protein_coding	Traf3	ENSMUST00000139162	protein_coding		12	1	111166486	645
ENSMUSG00000054717	protein_coding	Hmgb2	ENSMUST00000211198	processed_transcript		8	1	57512548	660
ENSMUSG00000002102	protein_coding	Psmc3	ENSMUST00000002171	protein_coding		2	1	91054055	1819
ENSMUSG00000106566	TEC	Gm43836	ENSMUST00000196532	TEC		5	1	64558183	381
ENSMUSG00000029415	protein_coding	Sdad1	ENSMUST00000202870	protein_coding		5	-1	92310479	578
ENSMUSG00000022210	protein_coding	Dhrs4	ENSMUST00000226168	protein_coding		14	1	55478875	828
ENSMUSG00000104961	TEC	Gm43835	ENSMUST00000195932	TEC		5	1	64563771	149
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000237551	retained_intron		17	1	30626935	3099
ENSMUSG00000104806	TEC	Gm42566	ENSMUST00000197120	TEC		5	-1	64564819	643
ENSMUSG00000106698	antisense	Gm43599	ENSMUST00000202680	antisense		5	1	92290052	528
ENSMUSG00000109899	processed_pseudogene	Gm6012	ENSMUST00000210821	processed_pseudogene		8	-1	57520886	730
ENSMUSG00000009569	protein_coding	Mrtfb	ENSMUST00000056715	protein_coding		16	1	13265076	618
ENSMUSG00000022210	protein_coding	Dhrs4	ENSMUST00000227513	retained_intron		14	1	55478906	762
ENSMUSG00000021277	protein_coding	Traf3	ENSMUST00000143395	retained_intron		12	1	111248483	1720
ENSMUSG00000022210	protein_coding	Dhrs4	ENSMUST00000226902	protein_coding		14	1	55478920	537
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000109175	protein_coding	alternative2	2	-1	168734339	3729
ENSMUSG00000021277	protein_coding	Traf3	ENSMUST00000060274	protein_coding	alternative1	12	1	111166548	6896
ENSMUSG00000022210	protein_coding	Dhrs4	ENSMUST00000228353	protein_coding		14	1	55478934	692
ENSMUSG00000002102	protein_coding	Psmc3	ENSMUST00000152269	processed_transcript		2	1	91054095	925
ENSMUSG00000105402	lincRNA	Gm3716	ENSMUST00000198582	lincRNA		5	-1	64610700	2879
ENSMUSG00000002102	protein_coding	Psmc3	ENSMUST00000111441	protein_coding		2	1	91054100	1419
ENSMUSG00000087526	antisense	Gm15738	ENSMUST00000210378	antisense		16	-1	13468745	1051
ENSMUSG00000022210	protein_coding	Dhrs4	ENSMUST00000226298	protein_coding		14	1	55480159	626
ENSMUSG00000105402	lincRNA	Gm3716	ENSMUST00000196283	lincRNA		5	-1	64603160	1521
ENSMUSG00000027194	protein_coding	Ttc17	ENSMUST00000055081	protein_coding		2	-1	94366597	3163
ENSMUSG00000002102	protein_coding	Psmc3	ENSMUST00000185715	protein_coding		2	1	91054278	944
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000109176	protein_coding		2	-1	168741962	3691
ENSMUSG00000083193	protein_coding	4930595D18Rik	ENSMUST00000121608	protein_coding	principal1	12	-1	111184491	818
ENSMUSG00000062342	protein_coding	Serpinb9e	ENSMUST00000071873	protein_coding	principal1	13	1	33249612	1923
ENSMUSG00000022210	protein_coding	Dhrs4	ENSMUST00000227542	retained_intron		14	1	55487192	831
ENSMUSG00000087526	antisense	Gm15738	ENSMUST00000140892	antisense		16	-1	13467268	427
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000144066	processed_transcript		2	1	146047251	2038
ENSMUSG00000084207	processed_pseudogene	Gm14070	ENSMUST00000120773	processed_pseudogene		2	1	139863297	428
ENSMUSG00000087526	antisense	Gm15738	ENSMUST00000131985	antisense		16	-1	13404682	275
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000109177	protein_coding		2	-1	168742133	3456
ENSMUSG00000102271	TEC	C630050I24Rik	ENSMUST00000193420	TEC		8	1	107119110	783
ENSMUSG00000002102	protein_coding	Psmc3	ENSMUST00000146506	nonsense_mediated_decay		2	1	91054301	792
ENSMUSG00000087526	antisense	Gm15738	ENSMUST00000209213	antisense		16	-1	13468753	525
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000116398	protein_coding		2	1	145934784	1561
ENSMUSG00000087526	antisense	Gm15738	ENSMUST00000210237	antisense		16	-1	13468755	304
ENSMUSG00000061863	processed_pseudogene	Gm6822	ENSMUST00000161440	processed_pseudogene		1	-1	55161053	307
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000147757	processed_transcript		2	-1	168670346	568
ENSMUSG00000109857	processed_transcript	Gm32817	ENSMUST00000210738	lincRNA		16	1	13462546	527
ENSMUSG00000002102	protein_coding	Psmc3	ENSMUST00000141462	processed_transcript		2	1	91054382	429
ENSMUSG00000109857	processed_transcript	Gm32817	ENSMUST00000210007	lincRNA		16	1	13464184	689
ENSMUSG00000073650	protein_coding	Catip	ENSMUST00000097697	protein_coding	principal2	1	1	74362108	2101
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000146891	processed_transcript		2	1	146214265	577
ENSMUSG00000109857	processed_transcript	Gm32817	ENSMUST00000210938	retained_intron		16	1	13464796	2431
ENSMUSG00000002102	protein_coding	Psmc3	ENSMUST00000131473	processed_transcript		2	1	91054478	403
ENSMUSG00000073411	protein_coding	H2-D1	ENSMUST00000172785	protein_coding	principal2	17	1	35262730	2102
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000130168	protein_coding		2	1	145934808	624
ENSMUSG00000002102	protein_coding	Psmc3	ENSMUST00000151419	processed_transcript		2	1	91054573	598
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000152515	protein_coding		2	1	145934805	640
ENSMUSG00000073650	protein_coding	Catip	ENSMUST00000128445	protein_coding	alternative2	1	1	74362366	803
ENSMUSG00000002102	protein_coding	Psmc3	ENSMUST00000145317	processed_transcript		2	1	91058109	436
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000049544	protein_coding		2	-1	77170635	8969
ENSMUSG00000048148	protein_coding	Nwd1	ENSMUST00000161254	protein_coding		8	1	72646771	10792
ENSMUSG00000073411	protein_coding	H2-D1	ENSMUST00000172503	protein_coding	alternative2	17	1	35263096	1744
ENSMUSG00000073650	protein_coding	Catip	ENSMUST00000191010	protein_coding	alternative2	1	1	74362442	1866
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000155214	processed_transcript		2	1	146041494	854
ENSMUSG00000073650	protein_coding	Catip	ENSMUST00000186688	retained_intron		1	1	74364531	312
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000150771	retained_intron		2	1	146045326	805
ENSMUSG00000048148	protein_coding	Nwd1	ENSMUST00000228312	protein_coding	principal1	8	1	72650294	10789
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000140188	retained_intron		2	-1	168741800	2484
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000125223	protein_coding		2	1	146045458	882
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000151610	protein_coding		2	-1	168742375	634
ENSMUSG00000073411	protein_coding	H2-D1	ENSMUST00000174325	retained_intron		17	1	35265477	716
ENSMUSG00000032726	protein_coding	Bmp8a	ENSMUST00000102641	protein_coding	principal3	4	-1	123342803	1917
ENSMUSG00000060827	protein_coding	Olfr1193	ENSMUST00000217271	processed_transcript		2	1	88675628	2889
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000143896	processed_transcript		2	1	146152344	768
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000156397	protein_coding		2	-1	168742409	655
ENSMUSG00000037143	protein_coding	Cfap61	ENSMUST00000167179	protein_coding		2	1	146214613	183
ENSMUSG00000048148	protein_coding	Nwd1	ENSMUST00000160443	nonsense_mediated_decay		8	1	72653486	4126
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000164114	protein_coding	principal1	2	-1	77170617	6222
ENSMUSG00000060827	protein_coding	Olfr1193	ENSMUST00000216767	protein_coding	principal1	2	1	88675628	3690
ENSMUSG00000038327	protein_coding	Serpinb9f	ENSMUST00000075515	protein_coding	principal1	13	1	33324077	1912
ENSMUSG00000060827	protein_coding	Olfr1193	ENSMUST00000213893	protein_coding	principal1	2	1	88675638	3519
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000123156	protein_coding		2	-1	168712913	603
ENSMUSG00000005339	protein_coding	Fcer1a	ENSMUST00000049706	protein_coding	principal1	1	-1	173227214	998
ENSMUSG00000096539	unprocessed_pseudogene	Gm7438	ENSMUST00000177664	unprocessed_pseudogene		X	1	30681894	639
ENSMUSG00000020993	protein_coding	Trappc6b	ENSMUST00000021380	protein_coding	principal1	12	-1	59061461	1255
ENSMUSG00000060827	protein_coding	Olfr1193	ENSMUST00000081697	protein_coding		2	1	88677857	957
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000110238	protein_coding		13	1	37826038	7437
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000179868	protein_coding		2	-1	77019917	514
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000075992	protein_coding	principal1	10	1	57632051	5317
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000156555	protein_coding		2	-1	168712962	481
ENSMUSG00000048148	protein_coding	Nwd1	ENSMUST00000163026	processed_transcript		8	1	72657086	4274
ENSMUSG00000005339	protein_coding	Fcer1a	ENSMUST00000193017	protein_coding		1	-1	173227194	826
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000180261	processed_transcript		2	-1	77022696	363
ENSMUSG00000048148	protein_coding	Nwd1	ENSMUST00000160912	processed_transcript		8	1	72657086	4231
ENSMUSG00000092444	transcribed_unprocessed_pseudogene	Gm18733	ENSMUST00000174447	transcribed_unprocessed_pseudogene		17	-1	35279231	401
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000029060	protein_coding	principal3	2	-1	168741800	3529
ENSMUSG00000032726	protein_coding	Bmp8a	ENSMUST00000040496	protein_coding	alternative2	4	-1	123343252	2405
ENSMUSG00000092444	transcribed_unprocessed_pseudogene	Gm18733	ENSMUST00000173950	processed_transcript		17	-1	35279414	856
ENSMUSG00000048148	protein_coding	Nwd1	ENSMUST00000162248	processed_transcript		8	1	72681791	645
ENSMUSG00000035614	protein_coding	Togaram1	ENSMUST00000066296	protein_coding	principal2	12	1	64965804	6372
ENSMUSG00000075121	protein_coding	Olfr1195	ENSMUST00000213545	protein_coding	principal1	2	-1	88689187	2585
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000177299	retained_intron		10	1	57632056	2608
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000154013	retained_intron		2	-1	77030650	635
ENSMUSG00000075121	protein_coding	Olfr1195	ENSMUST00000099818	protein_coding	principal1	2	-1	88683730	927
ENSMUSG00000048148	protein_coding	Nwd1	ENSMUST00000093427	protein_coding		8	1	72646711	7840
ENSMUSG00000035614	protein_coding	Togaram1	ENSMUST00000223166	protein_coding	alternative2	12	1	64965940	6386
ENSMUSG00000092311	unprocessed_pseudogene	Vmn1r-ps26	ENSMUST00000174239	unprocessed_pseudogene		6	1	89789449	840
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000175840	retained_intron		2	-1	77044080	2028
ENSMUSG00000092237	transcribed_unprocessed_pseudogene	Vmn1r-ps27	ENSMUST00000235886	processed_transcript		6	-1	89806102	3276
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000176225	retained_intron		10	1	57632094	2773
ENSMUSG00000076436	protein_coding	Oxct2a	ENSMUST00000102640	protein_coding	principal1	4	-1	123323634	1760
ENSMUSG00000035614	protein_coding	Togaram1	ENSMUST00000221836	nonsense_mediated_decay		12	1	64966056	2597
ENSMUSG00000092237	transcribed_unprocessed_pseudogene	Vmn1r-ps27	ENSMUST00000174619	transcribed_unprocessed_pseudogene		6	-1	89805992	985
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000179467	protein_coding		2	-1	77044730	461
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000177438	protein_coding		10	1	57632124	417
ENSMUSG00000030471	protein_coding	Zdhhc13	ENSMUST00000118927	protein_coding	principal1	7	1	48789003	2410
ENSMUSG00000084768	lincRNA	Gm13605	ENSMUST00000124489	lincRNA		2	1	35224533	1091
ENSMUSG00000027546	protein_coding	Atp9a	ENSMUST00000178504	protein_coding	alternative2	2	-1	168741964	3668
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000176741	processed_transcript		10	1	57640960	2528
ENSMUSG00000035614	protein_coding	Togaram1	ENSMUST00000223311	retained_intron		12	1	64980614	2161
ENSMUSG00000035614	protein_coding	Togaram1	ENSMUST00000221400	processed_transcript		12	1	64984320	619
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000128570	protein_coding	principal1	13	1	37826315	8436
ENSMUSG00000035614	protein_coding	Togaram1	ENSMUST00000220487	retained_intron		12	1	64987521	3642
ENSMUSG00000020993	protein_coding	Trappc6b	ENSMUST00000217660	nonsense_mediated_decay		12	-1	59061472	1486
ENSMUSG00000035614	protein_coding	Togaram1	ENSMUST00000222473	retained_intron		12	1	65019958	621
ENSMUSG00000035614	protein_coding	Togaram1	ENSMUST00000222425	retained_intron		12	1	65020757	1815
ENSMUSG00000020993	protein_coding	Trappc6b	ENSMUST00000217873	retained_intron		12	-1	59044734	901
ENSMUSG00000031161	protein_coding	Hdac6	ENSMUST00000115642	protein_coding	principal1	X	-1	7947889	4069
ENSMUSG00000020993	protein_coding	Trappc6b	ENSMUST00000218686	protein_coding		12	-1	59061418	785
ENSMUSG00000113298	antisense	Gm48559	ENSMUST00000221808	antisense		12	-1	64982936	317
ENSMUSG00000068231	protein_coding	Vmn1r43	ENSMUST00000226741	protein_coding	principal1	6	-1	89872654	12542
ENSMUSG00000068231	protein_coding	Vmn1r43	ENSMUST00000228709	protein_coding	principal1	6	-1	89876413	12646
ENSMUSG00000108007	processed_pseudogene	Gm18540	ENSMUST00000204025	processed_pseudogene		6	1	62820108	526
ENSMUSG00000059625	protein_coding	Sohlh1	ENSMUST00000076989	protein_coding	principal1	2	-1	25847248	1289
ENSMUSG00000068231	protein_coding	Vmn1r43	ENSMUST00000226983	protein_coding	principal1	6	-1	89876413	12805
ENSMUSG00000030471	protein_coding	Zdhhc13	ENSMUST00000125280	protein_coding		7	1	48789026	1655
ENSMUSG00000107854	unprocessed_pseudogene	Gm5001	ENSMUST00000204361	unprocessed_pseudogene		6	1	62929146	331
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000149745	protein_coding		13	1	37826932	4320
ENSMUSG00000020993	protein_coding	Trappc6b	ENSMUST00000217863	protein_coding		12	-1	59061452	797
ENSMUSG00000068231	protein_coding	Vmn1r43	ENSMUST00000226240	processed_transcript		6	-1	89876413	10147
ENSMUSG00000024068	protein_coding	Spast	ENSMUST00000224711	protein_coding	alternative2	17	1	74338987	2066
ENSMUSG00000001151	protein_coding	Pcnt	ENSMUST00000220395	processed_transcript		10	-1	76416912	6762
ENSMUSG00000020993	protein_coding	Trappc6b	ENSMUST00000218799	nonsense_mediated_decay		12	-1	59061344	737
ENSMUSG00000094759	protein_coding	Gm10487	ENSMUST00000180344	protein_coding	principal1	X	-1	30843469	907
ENSMUSG00000030471	protein_coding	Zdhhc13	ENSMUST00000139125	processed_transcript		7	1	48789032	454
ENSMUSG00000068231	protein_coding	Vmn1r43	ENSMUST00000089418	protein_coding	principal1	6	-1	89870529	1069
ENSMUSG00000094759	protein_coding	Gm10487	ENSMUST00000177566	protein_coding	principal1	X	-1	30841834	639
ENSMUSG00000020993	protein_coding	Trappc6b	ENSMUST00000218150	retained_intron		12	-1	59051784	441
ENSMUSG00000109317	TEC	Gm45041	ENSMUST00000207366	TEC		7	1	48796302	3108
ENSMUSG00000020993	protein_coding	Trappc6b	ENSMUST00000218936	processed_transcript		12	-1	59061421	665
ENSMUSG00000107072	processed_pseudogene	Gm43090	ENSMUST00000202459	processed_pseudogene		5	1	90750525	314
ENSMUSG00000068232	protein_coding	Vmn1r42	ENSMUST00000226436	protein_coding	principal1	6	-1	89848051	4045
ENSMUSG00000068232	protein_coding	Vmn1r42	ENSMUST00000227279	protein_coding	principal1	6	-1	89876413	4138
ENSMUSG00000020993	protein_coding	Trappc6b	ENSMUST00000218523	retained_intron		12	-1	59061436	732
ENSMUSG00000052520	protein_coding	Cyp2j5	ENSMUST00000030299	protein_coding	principal1	4	-1	96664154	2345
ENSMUSG00000104111	lincRNA	Gm37294	ENSMUST00000193461	lincRNA		1	-1	160044331	494
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000177325	protein_coding	principal1	10	1	57645834	540
ENSMUSG00000020993	protein_coding	Trappc6b	ENSMUST00000219652	retained_intron		12	-1	59061430	368
ENSMUSG00000068232	protein_coding	Vmn1r42	ENSMUST00000089419	protein_coding	principal1	6	-1	89845615	1098
ENSMUSG00000104035	TEC	Gm37774	ENSMUST00000194401	TEC		18	-1	61935220	245
ENSMUSG00000092438	unprocessed_pseudogene	Gm18734	ENSMUST00000172937	unprocessed_pseudogene		17	-1	35306317	808
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000177473	protein_coding	principal1	10	1	57645885	525
ENSMUSG00000104928	lincRNA	Gm42565	ENSMUST00000197839	lincRNA		5	1	64635840	572
ENSMUSG00000099827	lincRNA	Gm29520	ENSMUST00000191209	lincRNA		1	-1	9640582	1067
ENSMUSG00000105183	lincRNA	Gm42564	ENSMUST00000196013	lincRNA		5	-1	64637388	582
ENSMUSG00000095754	protein_coding	Spin2f	ENSMUST00000238350	protein_coding		X	1	31253603	941
ENSMUSG00000116962	processed_pseudogene	Gm19000	ENSMUST00000232576	processed_pseudogene		16	1	62601383	1099
ENSMUSG00000024068	protein_coding	Spast	ENSMUST00000024869	protein_coding	principal2	17	1	74339013	4672
ENSMUSG00000085858	lincRNA	Gm15831	ENSMUST00000156195	lincRNA		5	-1	77122348	516
ENSMUSG00000093447	processed_pseudogene	Gm5139	ENSMUST00000175943	processed_pseudogene		3	1	64163390	249
ENSMUSG00000095754	protein_coding	Spin2f	ENSMUST00000238209	protein_coding	principal5	X	1	31253750	1040
ENSMUSG00000024068	protein_coding	Spast	ENSMUST00000233611	protein_coding	alternative2	17	1	74339037	1746
ENSMUSG00000095754	protein_coding	Spin2f	ENSMUST00000177990	protein_coding	alternative2	X	1	31253894	765
ENSMUSG00000106783	lincRNA	Chaer1	ENSMUST00000201649	lincRNA		5	-1	77140252	651
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000124373	nonsense_mediated_decay		13	1	37826932	2376
ENSMUSG00000040714	protein_coding	Klc3	ENSMUST00000108458	protein_coding		7	-1	19404104	1823
ENSMUSG00000027194	protein_coding	Ttc17	ENSMUST00000111237	protein_coding	alternative1	2	-1	94406679	4409
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000028406	retained_intron		2	-1	77170636	2669
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000066028	protein_coding	principal1	10	1	57650981	1552
ENSMUSG00000001288	protein_coding	Rarg	ENSMUST00000043172	protein_coding	principal1	15	-1	102257517	2953
ENSMUSG00000085783	processed_pseudogene	Gm9816	ENSMUST00000122292	processed_pseudogene		16	1	62717037	1414
ENSMUSG00000024068	protein_coding	Spast	ENSMUST00000225549	nonsense_mediated_decay		17	1	74339136	2897
ENSMUSG00000087667	antisense	Gm13381	ENSMUST00000177012	antisense		2	1	28562197	640
ENSMUSG00000027194	protein_coding	Ttc17	ENSMUST00000094801	protein_coding		2	-1	94406688	3408
ENSMUSG00000093416	unprocessed_pseudogene	Gm18294	ENSMUST00000176980	unprocessed_pseudogene		3	-1	64213677	1748
ENSMUSG00000024068	protein_coding	Spast	ENSMUST00000233554	protein_coding		17	1	74367296	573
ENSMUSG00000087667	antisense	Gm13381	ENSMUST00000131370	antisense		2	1	28562528	456
ENSMUSG00000040714	protein_coding	Klc3	ENSMUST00000047170	protein_coding		7	-1	19399878	1901
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000175852	protein_coding	principal1	10	1	57650994	731
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000110237	protein_coding		13	1	37827393	4617
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000131660	retained_intron		2	-1	77170610	1464
ENSMUSG00000027194	protein_coding	Ttc17	ENSMUST00000150215	processed_transcript		2	-1	94362817	4232
ENSMUSG00000040714	protein_coding	Klc3	ENSMUST00000108459	protein_coding		7	-1	19399921	1849
ENSMUSG00000019876	protein_coding	Pkib	ENSMUST00000176354	processed_transcript		10	1	57727981	324
ENSMUSG00000027194	protein_coding	Ttc17	ENSMUST00000150266	processed_transcript		2	-1	94404991	363
ENSMUSG00000030606	protein_coding	Hapln3	ENSMUST00000206092	protein_coding	principal1	7	-1	79131018	3358
ENSMUSG00000001288	protein_coding	Rarg	ENSMUST00000063339	protein_coding		15	-1	102246500	2718
ENSMUSG00000040714	protein_coding	Klc3	ENSMUST00000154419	retained_intron		7	-1	19395982	863
ENSMUSG00000027194	protein_coding	Ttc17	ENSMUST00000111238	protein_coding	principal2	2	-1	94406689	4590
ENSMUSG00000031161	protein_coding	Hdac6	ENSMUST00000137499	retained_intron		X	-1	7947838	5037
ENSMUSG00000040714	protein_coding	Klc3	ENSMUST00000108457	protein_coding	principal1	7	-1	19403783	1632
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000138110	protein_coding		13	1	37857934	512
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000133503	nonsense_mediated_decay		2	-1	77170600	658
ENSMUSG00000024130	protein_coding	Abca3	ENSMUST00000133816	retained_intron		17	1	24351950	3758
ENSMUSG00000030606	protein_coding	Hapln3	ENSMUST00000205782	protein_coding		7	-1	79130995	930
ENSMUSG00000001288	protein_coding	Rarg	ENSMUST00000135466	protein_coding		15	-1	102257349	934
ENSMUSG00000040714	protein_coding	Klc3	ENSMUST00000125246	retained_intron		7	-1	19396582	885
ENSMUSG00000086130	lincRNA	Gm16211	ENSMUST00000147722	lincRNA		4	-1	147670854	1620
ENSMUSG00000044033	protein_coding	Ccdc141	ENSMUST00000111833	protein_coding		2	-1	77170576	631
ENSMUSG00000001288	protein_coding	Rarg	ENSMUST00000130204	protein_coding		15	-1	102243589	423
ENSMUSG00000001288	protein_coding	Rarg	ENSMUST00000124224	processed_transcript		15	-1	102245231	311
ENSMUSG00000030606	protein_coding	Hapln3	ENSMUST00000032827	nonsense_mediated_decay		7	-1	79131013	1191
ENSMUSG00000001288	protein_coding	Rarg	ENSMUST00000155563	protein_coding		15	-1	102250346	111
ENSMUSG00000031161	protein_coding	Hdac6	ENSMUST00000145675	protein_coding		X	-1	7947889	3371
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000124268	processed_transcript		13	1	37888434	9702
ENSMUSG00000030606	protein_coding	Hapln3	ENSMUST00000206402	processed_transcript		7	-1	79128679	616
ENSMUSG00000001288	protein_coding	Rarg	ENSMUST00000230330	processed_transcript		15	-1	102252640	374
ENSMUSG00000031161	protein_coding	Hdac6	ENSMUST00000153788	retained_intron		X	-1	7934485	894
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000162849	protein_coding		13	1	37947016	1053
ENSMUSG00000085889	antisense	1700054M17Rik	ENSMUST00000125654	antisense		2	1	118304914	445
ENSMUSG00000031161	protein_coding	Hdac6	ENSMUST00000151916	retained_intron		X	-1	7938672	804
ENSMUSG00000097050	protein_coding	Gm9918	ENSMUST00000181801	protein_coding	principal1	15	1	102270563	2192
ENSMUSG00000028332	protein_coding	Hemgn	ENSMUST00000107764	protein_coding	principal1	4	-1	46404236	2363
ENSMUSG00000100975	lincRNA	Gm28875	ENSMUST00000185486	lincRNA		12	-1	104926689	1189
ENSMUSG00000039087	protein_coding	Rreb1	ENSMUST00000037232	protein_coding	principal1	13	1	37888871	8395
ENSMUSG00000104786	antisense	Gm43573	ENSMUST00000196445	antisense		3	1	148989152	570
ENSMUSG00000031161	protein_coding	Hdac6	ENSMUST00000156127	retained_intron		X	-1	7939964	853
ENSMUSG00000114370	antisense	Gm46411	ENSMUST00000224624	antisense		13	-1	37799790	2023
ENSMUSG00000046138	protein_coding	9930021J03Rik	ENSMUST00000175726	protein_coding		19	-1	29805507	7524
ENSMUSG00000031161	protein_coding	Hdac6	ENSMUST00000154200	retained_intron		X	-1	7947159	718
ENSMUSG00000023026	protein_coding	Dip2b	ENSMUST00000100203	protein_coding	principal1	15	1	100038664	8914
ENSMUSG00000001767	protein_coding	Crnkl1	ENSMUST00000001818	protein_coding	principal1	2	-1	145935014	3428
ENSMUSG00000028332	protein_coding	Hemgn	ENSMUST00000071096	protein_coding	principal1	4	-1	46413506	2321
ENSMUSG00000046138	protein_coding	9930021J03Rik	ENSMUST00000175764	protein_coding		19	-1	29743612	4678
ENSMUSG00000045665	protein_coding	Mfsd5	ENSMUST00000051341	protein_coding	principal1	15	1	102279454	1754
ENSMUSG00000040133	protein_coding	Gpr176	ENSMUST00000039160	protein_coding	principal1	2	-1	118373419	3899
ENSMUSG00000031161	protein_coding	Hdac6	ENSMUST00000133349	protein_coding		X	-1	7947553	932
ENSMUSG00000073600	protein_coding	Prob1	ENSMUST00000190196	protein_coding	principal1	18	-1	35655238	4888
ENSMUSG00000001767	protein_coding	Crnkl1	ENSMUST00000145425	retained_intron		2	-1	145931391	431
ENSMUSG00000031161	protein_coding	Hdac6	ENSMUST00000154244	protein_coding		X	-1	7947767	678
ENSMUSG00000046138	protein_coding	9930021J03Rik	ENSMUST00000177155	protein_coding	principal1	19	-1	29805989	6632
ENSMUSG00000073600	protein_coding	Prob1	ENSMUST00000237307	processed_transcript		18	-1	35652006	510
ENSMUSG00000026058	protein_coding	Khdrbs2	ENSMUST00000027226	protein_coding	principal1	1	1	32172714	2281
ENSMUSG00000001767	protein_coding	Crnkl1	ENSMUST00000147904	retained_intron		2	-1	145934714	680
ENSMUSG00000073600	protein_coding	Prob1	ENSMUST00000097619	protein_coding		18	-1	35655187	3021
ENSMUSG00000116091	bidirectional_promoter_lncRNA	Gm49479	ENSMUST00000229580	bidirectional_promoter_lncRNA		15	-1	102296151	715
ENSMUSG00000046138	protein_coding	9930021J03Rik	ENSMUST00000176773	nonsense_mediated_decay		19	-1	29753662	529
ENSMUSG00000031161	protein_coding	Hdac6	ENSMUST00000033501	protein_coding	principal1	X	-1	7947889	4142
ENSMUSG00000045934	protein_coding	Mtmr11	ENSMUST00000147245	retained_intron		3	1	96162004	3224
ENSMUSG00000097946	processed_pseudogene	Gm8343	ENSMUST00000182705	processed_pseudogene		9	1	37685941	994
ENSMUSG00000018481	protein_coding	Appbp2	ENSMUST00000018625	protein_coding	principal1	11	-1	85235130	6463
ENSMUSG00000107708	transcribed_unprocessed_pseudogene	Gm19131	ENSMUST00000203464	processed_transcript		6	-1	63048172	3208
ENSMUSG00000026058	protein_coding	Khdrbs2	ENSMUST00000189878	protein_coding		1	1	32172729	3259
ENSMUSG00000058935	protein_coding	Tex48	ENSMUST00000102861	protein_coding	principal1	4	-1	63622416	677
ENSMUSG00000107708	transcribed_unprocessed_pseudogene	Gm19131	ENSMUST00000203408	transcribed_unprocessed_pseudogene		6	-1	63046725	789
ENSMUSG00000059252	processed_pseudogene	Tpt1-ps5	ENSMUST00000112150	processed_pseudogene		9	1	37696515	516
ENSMUSG00000114681	bidirectional_promoter_lncRNA	1700026N04Rik	ENSMUST00000224610	bidirectional_promoter_lncRNA		13	1	47106419	643
ENSMUSG00000107484	processed_pseudogene	Nasp-ps1	ENSMUST00000205050	processed_pseudogene		6	1	63160275	691
ENSMUSG00000023026	protein_coding	Dip2b	ENSMUST00000023768	protein_coding		15	1	100154396	4320
ENSMUSG00000058935	protein_coding	Tex48	ENSMUST00000102862	protein_coding	principal1	4	-1	63622428	672
ENSMUSG00000020952	protein_coding	Scfd1	ENSMUST00000219264	retained_intron		12	1	51377510	3108
ENSMUSG00000026058	protein_coding	Khdrbs2	ENSMUST00000188257	protein_coding		1	1	32172748	5278
ENSMUSG00000109142	processed_pseudogene	Gm44600	ENSMUST00000208540	processed_pseudogene		7	-1	30212738	111
ENSMUSG00000067203	transcribed_unprocessed_pseudogene	H2-K2	ENSMUST00000235582	processed_transcript		17	-1	33978827	1567
ENSMUSG00000026058	protein_coding	Khdrbs2	ENSMUST00000185666	protein_coding		1	1	32172887	543
ENSMUSG00000023026	protein_coding	Dip2b	ENSMUST00000230733	retained_intron		15	1	100162727	371
ENSMUSG00000067203	transcribed_unprocessed_pseudogene	H2-K2	ENSMUST00000174250	transcribed_unprocessed_pseudogene		17	-1	33978790	1052
ENSMUSG00000026058	protein_coding	Khdrbs2	ENSMUST00000186984	processed_transcript		1	1	32315015	275
ENSMUSG00000023026	protein_coding	Dip2b	ENSMUST00000230619	retained_intron		15	1	100198940	743
ENSMUSG00000085628	antisense	Appbp2os	ENSMUST00000136454	antisense		11	1	85235171	635
ENSMUSG00000102865	TEC	Gm9839	ENSMUST00000195252	TEC		1	-1	32520999	1437
ENSMUSG00000023026	protein_coding	Dip2b	ENSMUST00000135658	retained_intron		15	1	100203136	714
ENSMUSG00000085628	antisense	Appbp2os	ENSMUST00000206972	pseudogene		11	1	85234775	447
ENSMUSG00000095093	protein_coding	Vmn2r111	ENSMUST00000092491	protein_coding	principal2	17	-1	22573482	6220
ENSMUSG00000080791	processed_pseudogene	Akirin1-ps	ENSMUST00000119676	processed_pseudogene		11	1	85216597	458
ENSMUSG00000104313	TEC	Gm37911	ENSMUST00000193099	TEC		1	1	32496444	1545
ENSMUSG00000086817	lincRNA	Gm11482	ENSMUST00000147067	lincRNA		4	1	63634421	719
ENSMUSG00000026818	protein_coding	Cel	ENSMUST00000028161	protein_coding	principal1	2	-1	28563362	2063
ENSMUSG00000095093	protein_coding	Vmn2r111	ENSMUST00000234301	retained_intron		17	-1	22573482	7178
ENSMUSG00000116311	antisense	4930478M13Rik	ENSMUST00000229204	antisense		15	-1	100108161	443
ENSMUSG00000095093	protein_coding	Vmn2r111	ENSMUST00000234223	protein_coding		17	-1	22573482	6235
ENSMUSG00000091318	protein_coding	Gm5415	ENSMUST00000171322	protein_coding	principal1	1	-1	32547294	3609
ENSMUSG00000095093	protein_coding	Vmn2r111	ENSMUST00000234296	protein_coding		17	-1	22573482	6096
ENSMUSG00000095093	protein_coding	Vmn2r111	ENSMUST00000234027	protein_coding	alternative2	17	-1	22573482	6100
ENSMUSG00000075120	protein_coding	Olfr1196	ENSMUST00000216928	protein_coding	principal1	2	-1	88704470	4270
ENSMUSG00000104498	TEC	Gm37110	ENSMUST00000192993	TEC		1	1	32485315	1628
ENSMUSG00000102321	TEC	Gm37792	ENSMUST00000195761	TEC		1	1	32539028	3413
ENSMUSG00000075120	protein_coding	Olfr1196	ENSMUST00000216977	protein_coding	principal1	2	-1	88704597	4225
ENSMUSG00000103482	TEC	Gm37999	ENSMUST00000195178	TEC		1	1	32473757	1809
ENSMUSG00000026818	protein_coding	Cel	ENSMUST00000124756	processed_transcript		2	-1	28563403	536
ENSMUSG00000075120	protein_coding	Olfr1196	ENSMUST00000104892	protein_coding	principal1	2	-1	88701327	945
ENSMUSG00000029371	protein_coding	Cxcl5	ENSMUST00000202380	retained_intron		5	1	90759360	1863
ENSMUSG00000036214	protein_coding	Znrd1as	ENSMUST00000040177	protein_coding	principal2	17	1	36958592	976
ENSMUSG00000055298	protein_coding	Ctsj	ENSMUST00000224224	protein_coding	alternative2	13	-1	61005959	1421
ENSMUSG00000062518	protein_coding	Zfp534	ENSMUST00000117638	protein_coding	principal1	4	-1	147702553	2885
ENSMUSG00000096521	processed_pseudogene	Gm13137	ENSMUST00000118035	processed_pseudogene		4	1	147732788	345
ENSMUSG00000035486	protein_coding	Plk5	ENSMUST00000039836	protein_coding	principal3	10	1	80356459	2112
ENSMUSG00000081179	processed_pseudogene	Gm13136	ENSMUST00000121031	processed_pseudogene		4	-1	147738426	2950
ENSMUSG00000036214	protein_coding	Znrd1as	ENSMUST00000172672	processed_transcript		17	1	36958619	652
ENSMUSG00000083642	processed_pseudogene	Gm13148	ENSMUST00000118892	processed_pseudogene		4	-1	147746561	745
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000145913	protein_coding		9	1	102716672	781
ENSMUSG00000035486	protein_coding	Plk5	ENSMUST00000105351	protein_coding	alternative2	10	1	80356459	2100
ENSMUSG00000029371	protein_coding	Cxcl5	ENSMUST00000031318	protein_coding	principal1	5	1	90759378	1575
ENSMUSG00000055298	protein_coding	Ctsj	ENSMUST00000071526	protein_coding	principal2	13	-1	61005911	1271
ENSMUSG00000036214	protein_coding	Znrd1as	ENSMUST00000173814	protein_coding	alternative2	17	1	36958641	1020
ENSMUSG00000036214	protein_coding	Znrd1as	ENSMUST00000209623	protein_coding	alternative2	17	1	36963822	1218
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000111436	protein_coding		2	-1	91070283	1291
ENSMUSG00000030247	protein_coding	Kcnj8	ENSMUST00000203945	protein_coding	principal1	6	-1	142571614	2548
ENSMUSG00000078495	protein_coding	Zfp984	ENSMUST00000122309	protein_coding	principal1	4	-1	147775833	2405
ENSMUSG00000055298	protein_coding	Ctsj	ENSMUST00000224306	processed_transcript		13	-1	61005911	420
ENSMUSG00000001138	protein_coding	Cnnm3	ENSMUST00000001166	protein_coding	principal4	1	1	36511867	5193
ENSMUSG00000030247	protein_coding	Kcnj8	ENSMUST00000032374	protein_coding		6	-1	142571371	2269
ENSMUSG00000061165	protein_coding	Olfr160	ENSMUST00000215727	protein_coding	principal1	9	-1	37716223	1667
ENSMUSG00000078495	protein_coding	Zfp984	ENSMUST00000105734	protein_coding	principal1	4	-1	147809788	2729
ENSMUSG00000035486	protein_coding	Plk5	ENSMUST00000152544	retained_intron		10	1	80357977	1262
ENSMUSG00000075119	protein_coding	Olfr1197	ENSMUST00000213118	protein_coding	principal1	2	-1	88732366	2899
ENSMUSG00000061165	protein_coding	Olfr160	ENSMUST00000211952	protein_coding	principal1	9	-1	37716250	3492
ENSMUSG00000107525	antisense	Gm44071	ENSMUST00000204180	antisense		6	-1	63328441	448
ENSMUSG00000035486	protein_coding	Plk5	ENSMUST00000146826	retained_intron		10	1	80359270	701
ENSMUSG00000093594	lincRNA	Gm20707	ENSMUST00000176201	lincRNA		4	-1	147809840	2516
ENSMUSG00000075119	protein_coding	Olfr1197	ENSMUST00000099815	protein_coding	principal1	2	-1	88729597	945
ENSMUSG00000061165	protein_coding	Olfr160	ENSMUST00000104875	protein_coding	principal1	9	-1	37712277	930
ENSMUSG00000108242	processed_transcript	9330118I20Rik	ENSMUST00000203390	lincRNA		6	-1	63255373	1066
ENSMUSG00000080059	processed_pseudogene	Rps19-ps3	ENSMUST00000116174	processed_pseudogene		4	-1	147822202	426
ENSMUSG00000029372	protein_coding	Ppbp	ENSMUST00000031319	protein_coding	principal1	5	1	90768518	1083
ENSMUSG00000108242	processed_transcript	9330118I20Rik	ENSMUST00000203667	retained_intron		6	-1	63257625	4489
ENSMUSG00000083337	processed_pseudogene	Gm11539	ENSMUST00000119837	processed_pseudogene		11	1	96248633	557
ENSMUSG00000049249	transcribed_processed_pseudogene	Gm5316	ENSMUST00000185734	processed_transcript		6	-1	122902816	3096
ENSMUSG00000068014	processed_pseudogene	Gm14648	ENSMUST00000119328	processed_pseudogene		X	1	47900345	483
ENSMUSG00000108068	processed_pseudogene	Gm44075	ENSMUST00000204208	processed_pseudogene		6	-1	63784067	216
ENSMUSG00000049249	transcribed_processed_pseudogene	Gm5316	ENSMUST00000050391	transcribed_processed_pseudogene		6	-1	122900405	270
ENSMUSG00000103896	processed_pseudogene	Gm37128	ENSMUST00000192599	processed_pseudogene		3	1	33190805	232
ENSMUSG00000107700	processed_pseudogene	Gm20144	ENSMUST00000203031	processed_pseudogene		6	1	64092139	165
ENSMUSG00000113721	processed_pseudogene	Gm21051	ENSMUST00000221757	processed_pseudogene		12	-1	91871830	1688
ENSMUSG00000001138	protein_coding	Cnnm3	ENSMUST00000097776	protein_coding	alternative2	1	1	36511867	5292
ENSMUSG00000107864	antisense	Gm44072	ENSMUST00000203666	antisense		6	-1	64041557	383
ENSMUSG00000110526	polymorphic_pseudogene	Olfr151	ENSMUST00000211893	polymorphic_pseudogene	principal1	9	-1	37731104	1128
ENSMUSG00000032114	protein_coding	Slc37a4	ENSMUST00000215420	protein_coding	principal2	9	1	44396852	2128
ENSMUSG00000059423	protein_coding	Zfp933	ENSMUST00000105718	protein_coding	principal1	4	-1	147848366	4238
ENSMUSG00000084032	processed_pseudogene	Gm12991	ENSMUST00000120561	processed_pseudogene		4	1	135377158	78
ENSMUSG00000071424	protein_coding	Grid2	ENSMUST00000159319	processed_transcript		6	1	63255876	3397
ENSMUSG00000001138	protein_coding	Cnnm3	ENSMUST00000154225	retained_intron		1	1	36513097	559
ENSMUSG00000059423	protein_coding	Zfp933	ENSMUST00000135798	protein_coding		4	-1	147848366	509
ENSMUSG00000083534	unprocessed_pseudogene	H2-M6-ps	ENSMUST00000119193	unprocessed_pseudogene		17	-1	36971396	1034
ENSMUSG00000024352	protein_coding	Spata24	ENSMUST00000025209	protein_coding	principal1	18	-1	35662186	702
ENSMUSG00000001138	protein_coding	Cnnm3	ENSMUST00000195264	retained_intron		1	1	36518569	1006
ENSMUSG00000024785	protein_coding	Rcl1	ENSMUST00000235900	protein_coding		19	1	29101375	1884
ENSMUSG00000027344	protein_coding	Fsip1	ENSMUST00000231133	protein_coding	alternative2	2	-1	118256956	2076
ENSMUSG00000034800	protein_coding	Zfp661	ENSMUST00000110366	protein_coding	principal1	2	-1	127587094	4912
ENSMUSG00000032114	protein_coding	Slc37a4	ENSMUST00000215121	protein_coding		9	1	44397095	891
ENSMUSG00000091425	antisense	Gm17118	ENSMUST00000164032	antisense		9	-1	107445031	335
ENSMUSG00000027344	protein_coding	Fsip1	ENSMUST00000231041	processed_transcript		2	-1	118142089	905
ENSMUSG00000001138	protein_coding	Cnnm3	ENSMUST00000135100	retained_intron		1	1	36520761	863
ENSMUSG00000063350	protein_coding	Olfr874	ENSMUST00000216982	protein_coding	principal1	9	1	37745106	2632
ENSMUSG00000024352	protein_coding	Spata24	ENSMUST00000236539	protein_coding		18	-1	35660827	484
ENSMUSG00000102845	antisense	Gm38033	ENSMUST00000192037	antisense		1	-1	36528237	269
ENSMUSG00000024785	protein_coding	Rcl1	ENSMUST00000064393	protein_coding	principal1	19	1	29101375	1803
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000073575	protein_coding	principal1	2	-1	91070417	2469
ENSMUSG00000071424	protein_coding	Grid2	ENSMUST00000159561	processed_transcript		6	1	63256006	4387
ENSMUSG00000032114	protein_coding	Slc37a4	ENSMUST00000213388	protein_coding	principal2	9	1	44397099	2344
ENSMUSG00000063350	protein_coding	Olfr874	ENSMUST00000115004	protein_coding	principal1	9	1	37746136	933
ENSMUSG00000094921	protein_coding	Vmn2r112	ENSMUST00000234464	retained_intron		17	1	22600951	9615
ENSMUSG00000028878	protein_coding	Fam76a	ENSMUST00000030696	protein_coding	principal1	4	-1	132922558	3053
ENSMUSG00000034800	protein_coding	Zfp661	ENSMUST00000110368	protein_coding	principal1	2	-1	127584669	2981
ENSMUSG00000058628	protein_coding	Olfr875	ENSMUST00000215128	protein_coding	principal1	9	1	37771857	2039
ENSMUSG00000024352	protein_coding	Spata24	ENSMUST00000235760	nonsense_mediated_decay		18	-1	35662131	484
ENSMUSG00000027344	protein_coding	Fsip1	ENSMUST00000028821	protein_coding	principal2	2	-1	118256966	1673
ENSMUSG00000029373	protein_coding	Pf4	ENSMUST00000031320	protein_coding	principal1	5	1	90772435	588
ENSMUSG00000021238	protein_coding	Aldh6a1	ENSMUST00000222641	processed_transcript		12	-1	84448317	3471
ENSMUSG00000027344	protein_coding	Fsip1	ENSMUST00000028820	protein_coding		2	-1	118256956	1025
ENSMUSG00000032114	protein_coding	Slc37a4	ENSMUST00000165839	protein_coding	principal2	9	1	44398176	2086
ENSMUSG00000034800	protein_coding	Zfp661	ENSMUST00000077422	protein_coding	principal1	2	-1	127584677	2765
ENSMUSG00000045934	protein_coding	Mtmr11	ENSMUST00000054356	protein_coding	principal1	3	1	96162004	2778
ENSMUSG00000058628	protein_coding	Olfr875	ENSMUST00000080634	protein_coding	principal1	9	1	37772637	1004
ENSMUSG00000024352	protein_coding	Spata24	ENSMUST00000096573	protein_coding		18	-1	35662186	710
ENSMUSG00000029373	protein_coding	Pf4	ENSMUST00000202625	protein_coding		5	1	90772513	411
ENSMUSG00000028878	protein_coding	Fam76a	ENSMUST00000097856	protein_coding		4	-1	132922493	1863
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000079976	protein_coding		2	-1	91070229	1884
ENSMUSG00000032114	protein_coding	Slc37a4	ENSMUST00000215001	protein_coding		9	1	44398183	579
ENSMUSG00000029373	protein_coding	Pf4	ENSMUST00000201990	retained_intron		5	1	90772891	360
ENSMUSG00000034800	protein_coding	Zfp661	ENSMUST00000164551	protein_coding	principal1	2	-1	127581508	1284
ENSMUSG00000032114	protein_coding	Slc37a4	ENSMUST00000213268	protein_coding	alternative1	9	1	44398474	1353
ENSMUSG00000113676	processed_pseudogene	Gm18621	ENSMUST00000222677	processed_pseudogene		12	-1	91873643	679
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000153367	protein_coding		2	-1	91070187	448
ENSMUSG00000032114	protein_coding	Slc37a4	ENSMUST00000213626	retained_intron		9	1	44401917	595
ENSMUSG00000045339	lincRNA	A930104D05Rik	ENSMUST00000128601	lincRNA		2	-1	118276169	939
ENSMUSG00000028878	protein_coding	Fam76a	ENSMUST00000148667	protein_coding		4	-1	132920909	394
ENSMUSG00000066389	processed_pseudogene	Rpl31-ps1	ENSMUST00000085128	processed_pseudogene		12	-1	91891273	378
ENSMUSG00000045339	lincRNA	A930104D05Rik	ENSMUST00000171038	lincRNA		2	-1	118276001	399
ENSMUSG00000024352	protein_coding	Spata24	ENSMUST00000235803	nonsense_mediated_decay		18	-1	35662156	713
ENSMUSG00000024352	protein_coding	Spata24	ENSMUST00000236971	protein_coding		18	-1	35662131	549
ENSMUSG00000049605	protein_coding	Olfr418	ENSMUST00000213420	protein_coding	principal1	1	1	173266001	4388
ENSMUSG00000100046	processed_transcript	Gm29232	ENSMUST00000189100	processed_transcript		2	-1	118279430	297
ENSMUSG00000024352	protein_coding	Spata24	ENSMUST00000236574	protein_coding		18	-1	35662122	596
ENSMUSG00000049605	protein_coding	Olfr418	ENSMUST00000059754	protein_coding	principal1	1	1	173270147	991
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000123685	processed_transcript		2	-1	91070298	668
ENSMUSG00000045934	protein_coding	Mtmr11	ENSMUST00000129925	nonsense_mediated_decay		3	1	96162085	2608
ENSMUSG00000094921	protein_coding	Vmn2r112	ENSMUST00000097381	protein_coding	principal2	17	1	22600951	4480
ENSMUSG00000045934	protein_coding	Mtmr11	ENSMUST00000123520	retained_intron		3	1	96162166	489
ENSMUSG00000094921	protein_coding	Vmn2r112	ENSMUST00000234882	protein_coding	alternative2	17	1	22600951	4432
ENSMUSG00000071424	protein_coding	Grid2	ENSMUST00000095852	protein_coding	principal1	6	1	63256027	5860
ENSMUSG00000094921	protein_coding	Vmn2r112	ENSMUST00000234826	nonsense_mediated_decay		17	1	22600951	4322
ENSMUSG00000045934	protein_coding	Mtmr11	ENSMUST00000154955	processed_transcript		3	1	96162589	2478
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000084705	protein_coding		7	1	112679318	2543
ENSMUSG00000091572	protein_coding	Vmn2r3	ENSMUST00000233015	nonsense_mediated_decay		3	-1	64289709	5671
ENSMUSG00000079180	protein_coding	Mptx2	ENSMUST00000111224	protein_coding	principal1	1	-1	173277777	794
ENSMUSG00000045934	protein_coding	Mtmr11	ENSMUST00000152763	processed_transcript		3	1	96168876	522
ENSMUSG00000019188	protein_coding	H13	ENSMUST00000125366	protein_coding	principal1	2	1	152669461	5204
ENSMUSG00000071424	protein_coding	Grid2	ENSMUST00000160408	retained_intron		6	1	63256195	2331
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000130252	processed_transcript		2	-1	91070239	358
ENSMUSG00000071424	protein_coding	Grid2	ENSMUST00000161105	retained_intron		6	1	63256826	4274
ENSMUSG00000045934	protein_coding	Mtmr11	ENSMUST00000196004	processed_transcript		3	1	96170586	389
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000150348	processed_transcript		2	-1	91066176	861
ENSMUSG00000071424	protein_coding	Grid2	ENSMUST00000162968	retained_intron		6	1	64076792	581
ENSMUSG00000091572	protein_coding	Vmn2r3	ENSMUST00000233531	protein_coding		3	-1	64289709	4291
ENSMUSG00000071424	protein_coding	Grid2	ENSMUST00000210324	protein_coding		6	1	64663188	4125
ENSMUSG00000024353	protein_coding	Mzb1	ENSMUST00000025211	protein_coding	principal1	18	-1	35649367	904
ENSMUSG00000117168	processed_pseudogene	Gm49908	ENSMUST00000233846	processed_pseudogene		17	-1	51237062	292
ENSMUSG00000091572	protein_coding	Vmn2r3	ENSMUST00000233608	retained_intron		3	-1	64289709	8583
ENSMUSG00000097204	antisense	Gm17690	ENSMUST00000180958	antisense		3	-1	96172414	3467
ENSMUSG00000091572	protein_coding	Vmn2r3	ENSMUST00000233241	retained_intron		3	-1	64289709	8141
ENSMUSG00000091572	protein_coding	Vmn2r3	ENSMUST00000233952	nonsense_mediated_decay		3	-1	64289709	5380
ENSMUSG00000091572	protein_coding	Vmn2r3	ENSMUST00000233938	nonsense_mediated_decay		3	-1	64289709	7019
ENSMUSG00000097204	antisense	Gm17690	ENSMUST00000199721	antisense		3	-1	96172416	757
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000149430	processed_transcript		2	-1	91065446	958
ENSMUSG00000091572	protein_coding	Vmn2r3	ENSMUST00000232849	nonsense_mediated_decay		3	-1	64289709	10927
ENSMUSG00000027854	protein_coding	Sike1	ENSMUST00000029447	protein_coding	principal1	3	1	102995708	7375
ENSMUSG00000078706	lincRNA	Gm53	ENSMUST00000129907	lincRNA		11	1	96251105	1172
ENSMUSG00000091572	protein_coding	Vmn2r3	ENSMUST00000176328	protein_coding	alternative2	3	-1	64289709	5149
ENSMUSG00000117204	lincRNA	C330011F03Rik	ENSMUST00000233466	lincRNA		17	-1	51435838	2276
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000141328	processed_transcript		2	-1	91064386	1059
ENSMUSG00000074909	protein_coding	Ranbp6	ENSMUST00000099525	protein_coding	principal1	19	-1	29812974	4575
ENSMUSG00000027854	protein_coding	Sike1	ENSMUST00000151065	retained_intron		3	1	102995730	2418
ENSMUSG00000024353	protein_coding	Mzb1	ENSMUST00000235707	retained_intron		18	-1	35648694	735
ENSMUSG00000021238	protein_coding	Aldh6a1	ENSMUST00000085192	protein_coding	principal1	12	-1	84451003	3399
ENSMUSG00000091572	protein_coding	Vmn2r3	ENSMUST00000170244	protein_coding	principal2	3	-1	64287417	2670
ENSMUSG00000078706	lincRNA	Gm53	ENSMUST00000150490	lincRNA		11	1	96251644	3257
ENSMUSG00000027854	protein_coding	Sike1	ENSMUST00000119450	protein_coding		3	1	102995795	774
ENSMUSG00000024353	protein_coding	Mzb1	ENSMUST00000237462	protein_coding		18	-1	35648369	293
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000133047	processed_transcript		2	-1	91070239	621
ENSMUSG00000019188	protein_coding	H13	ENSMUST00000148156	retained_intron		2	1	152669486	2769
ENSMUSG00000074909	protein_coding	Ranbp6	ENSMUST00000235906	processed_transcript		19	-1	29812954	917
ENSMUSG00000078706	lincRNA	Gm53	ENSMUST00000139381	lincRNA		11	1	96252532	119
ENSMUSG00000117874	protein_coding	Gm50318	ENSMUST00000235292	nonsense_mediated_decay	principal1	18	-1	35662163	1115
ENSMUSG00000027854	protein_coding	Sike1	ENSMUST00000137332	retained_intron		3	1	102996049	322
ENSMUSG00000021238	protein_coding	Aldh6a1	ENSMUST00000222062	retained_intron		12	-1	84450966	2947
ENSMUSG00000002105	protein_coding	Slc39a13	ENSMUST00000142943	processed_transcript		2	-1	91068871	360
ENSMUSG00000021238	protein_coding	Aldh6a1	ENSMUST00000220491	protein_coding		12	-1	84451004	470
ENSMUSG00000118251	antisense	Gm50373	ENSMUST00000236200	antisense		19	1	29806663	249
ENSMUSG00000103306	processed_pseudogene	Gm37801	ENSMUST00000194754	processed_pseudogene		3	1	4766098	274
ENSMUSG00000027854	protein_coding	Sike1	ENSMUST00000197601	nonsense_mediated_decay		3	1	102996176	496
ENSMUSG00000021238	protein_coding	Aldh6a1	ENSMUST00000222656	processed_transcript		12	-1	84450948	565
ENSMUSG00000078706	lincRNA	Gm53	ENSMUST00000143887	lincRNA		11	1	96261610	757
ENSMUSG00000027854	protein_coding	Sike1	ENSMUST00000196827	retained_intron		3	1	102996728	2511
ENSMUSG00000104384	TEC	Gm37031	ENSMUST00000195487	TEC		3	1	33283118	2530
ENSMUSG00000104203	TEC	Gm37398	ENSMUST00000191914	TEC		3	-1	33394847	1466
ENSMUSG00000096029	protein_coding	Olfr679	ENSMUST00000215704	protein_coding	principal1	7	1	105081205	5018
ENSMUSG00000068856	protein_coding	Sf3b4	ENSMUST00000076372	protein_coding	principal1	3	1	96172332	1915
ENSMUSG00000096029	protein_coding	Olfr679	ENSMUST00000214328	protein_coding	principal1	7	1	105081205	5184
ENSMUSG00000117055	processed_pseudogene	Gm9805	ENSMUST00000233199	processed_pseudogene		17	1	22687720	1733
ENSMUSG00000096029	protein_coding	Olfr679	ENSMUST00000214738	processed_transcript		7	1	105081213	4905
ENSMUSG00000096029	protein_coding	Olfr679	ENSMUST00000098158	protein_coding	principal1	7	1	105085714	952
ENSMUSG00000068856	protein_coding	Sf3b4	ENSMUST00000153977	retained_intron		3	1	96172547	437
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000059768	protein_coding		7	1	112679320	9964
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000106638	protein_coding		7	1	112679357	3047
ENSMUSG00000064308	protein_coding	2410137M14Rik	ENSMUST00000039846	protein_coding	principal2	17	-1	36981237	865
ENSMUSG00000034853	protein_coding	Acot11	ENSMUST00000102762	protein_coding	principal3	4	-1	106799846	5689
ENSMUSG00000039457	protein_coding	Ppl	ENSMUST00000035672	protein_coding	principal1	16	-1	5132421	6217
ENSMUSG00000026816	protein_coding	Gtf3c5	ENSMUST00000113889	protein_coding	alternative2	2	-1	28583189	2667
ENSMUSG00000064308	protein_coding	2410137M14Rik	ENSMUST00000173707	protein_coding	alternative2	17	-1	36981217	724
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000080164	protein_coding	principal3	5	1	74535449	4673
ENSMUSG00000034853	protein_coding	Acot11	ENSMUST00000065253	protein_coding	alternative2	4	-1	106804998	2939
ENSMUSG00000034854	protein_coding	Mfsd12	ENSMUST00000044844	protein_coding	principal1	10	1	81357491	3971
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000172065	retained_intron		7	1	112679510	894
ENSMUSG00000066750	protein_coding	Olfr876	ENSMUST00000213368	nonsense_mediated_decay		9	1	37803031	3825
ENSMUSG00000066750	protein_coding	Olfr876	ENSMUST00000215287	protein_coding	principal1	9	1	37803058	4474
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000171373	protein_coding		7	1	112691698	546
ENSMUSG00000026816	protein_coding	Gtf3c5	ENSMUST00000028157	protein_coding	principal3	2	-1	28583279	2739
ENSMUSG00000039457	protein_coding	Ppl	ENSMUST00000230554	retained_intron		16	-1	5132410	2705
ENSMUSG00000036698	protein_coding	Ago2	ENSMUST00000044113	protein_coding	principal1	15	-1	73184935	13800
ENSMUSG00000034853	protein_coding	Acot11	ENSMUST00000140541	nonsense_mediated_decay		4	-1	106771556	2620
ENSMUSG00000034854	protein_coding	Mfsd12	ENSMUST00000132368	nonsense_mediated_decay		10	1	81357552	640
ENSMUSG00000098159	processed_pseudogene	Gm21614	ENSMUST00000183260	processed_pseudogene		12	-1	91969577	1005
ENSMUSG00000112953	processed_pseudogene	Gm47984	ENSMUST00000223280	processed_pseudogene		12	-1	92009175	572
ENSMUSG00000066750	protein_coding	Olfr876	ENSMUST00000086064	protein_coding	principal1	9	1	37803889	1048
ENSMUSG00000034853	protein_coding	Acot11	ENSMUST00000144809	processed_transcript		4	-1	106755960	401
ENSMUSG00000034853	protein_coding	Acot11	ENSMUST00000156567	nonsense_mediated_decay		4	-1	106799843	575
ENSMUSG00000113236	lincRNA	Gm40548	ENSMUST00000223522	lincRNA		12	1	92010419	644
ENSMUSG00000020952	protein_coding	Scfd1	ENSMUST00000219434	protein_coding		12	1	51377580	2749
ENSMUSG00000036698	protein_coding	Ago2	ENSMUST00000230158	processed_transcript		15	-1	73114054	616
ENSMUSG00000019188	protein_coding	H13	ENSMUST00000109825	protein_coding		2	1	152669488	1063
ENSMUSG00000113643	processed_pseudogene	Gm40598	ENSMUST00000222953	processed_pseudogene		12	-1	92161439	547
ENSMUSG00000111310	unprocessed_pseudogene	Gm47005	ENSMUST00000217130	unprocessed_pseudogene		9	1	37823137	235
ENSMUSG00000034853	protein_coding	Acot11	ENSMUST00000145061	protein_coding		4	-1	106799790	596
ENSMUSG00000026816	protein_coding	Gtf3c5	ENSMUST00000139580	retained_intron		2	-1	28571216	903
ENSMUSG00000034853	protein_coding	Acot11	ENSMUST00000148688	protein_coding		4	-1	106800249	330
ENSMUSG00000026816	protein_coding	Gtf3c5	ENSMUST00000142054	retained_intron		2	-1	28573950	600
ENSMUSG00000029437	protein_coding	Il31	ENSMUST00000031389	protein_coding	principal1	5	-1	123482101	806
ENSMUSG00000036698	protein_coding	Ago2	ENSMUST00000230464	processed_transcript		15	-1	73177847	617
ENSMUSG00000026816	protein_coding	Gtf3c5	ENSMUST00000150929	retained_intron		2	-1	28583267	1099
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000164363	protein_coding		7	1	112742045	1495
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000163593	processed_transcript		7	1	112759387	657
ENSMUSG00000057265	protein_coding	Bbof1	ENSMUST00000081828	protein_coding	principal1	12	1	84409071	2187
ENSMUSG00000026816	protein_coding	Gtf3c5	ENSMUST00000139553	nonsense_mediated_decay		2	-1	28582988	520
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000170352	protein_coding		7	1	112759438	1218
ENSMUSG00000026816	protein_coding	Gtf3c5	ENSMUST00000150699	processed_transcript		2	-1	28583751	494
ENSMUSG00000057265	protein_coding	Bbof1	ENSMUST00000151789	protein_coding		12	1	84413264	441
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000168981	protein_coding		7	1	112759483	1185
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000113536	protein_coding	alternative1	5	1	74535471	4769
ENSMUSG00000043924	protein_coding	Ncmap	ENSMUST00000105858	protein_coding	principal1	4	-1	135385655	1616
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000171197	protein_coding		7	1	112759483	1074
ENSMUSG00000029437	protein_coding	Il31	ENSMUST00000198901	protein_coding		5	-1	123482595	984
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000165036	protein_coding		7	1	112759483	1248
ENSMUSG00000057265	protein_coding	Bbof1	ENSMUST00000153540	nonsense_mediated_decay		12	1	84419974	636
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000167060	protein_coding		7	1	112759536	556
ENSMUSG00000029437	protein_coding	Il31	ENSMUST00000198463	protein_coding		5	-1	123489489	558
ENSMUSG00000057265	protein_coding	Bbof1	ENSMUST00000221969	protein_coding		12	1	84430219	2138
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000168328	retained_intron		7	1	112759546	646
ENSMUSG00000019188	protein_coding	H13	ENSMUST00000089059	protein_coding		2	1	152669488	1743
ENSMUSG00000029437	protein_coding	Il31	ENSMUST00000199227	processed_transcript		5	-1	123482524	267
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000210510	retained_intron		7	1	112839634	2841
ENSMUSG00000035873	protein_coding	Pawr	ENSMUST00000095313	protein_coding	principal2	10	1	108332121	1745
ENSMUSG00000098134	protein_coding	Rnf113a2	ENSMUST00000183146	protein_coding	principal1	12	1	84417196	1383
ENSMUSG00000029379	protein_coding	Cxcl3	ENSMUST00000031326	protein_coding	principal1	5	1	90786103	1016
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000113534	protein_coding		5	1	74535479	2140
ENSMUSG00000019188	protein_coding	H13	ENSMUST00000079247	protein_coding		2	1	152669534	1090
ENSMUSG00000019188	protein_coding	H13	ENSMUST00000129439	retained_intron		2	1	152691839	798
ENSMUSG00000035873	protein_coding	Pawr	ENSMUST00000218332	protein_coding	alternative2	10	1	108332817	870
ENSMUSG00000029379	protein_coding	Cxcl3	ENSMUST00000201840	retained_intron		5	1	90786103	3498
ENSMUSG00000114085	processed_pseudogene	Gm6841	ENSMUST00000220602	processed_pseudogene		12	1	92219377	598
ENSMUSG00000103423	processed_pseudogene	Gm5845	ENSMUST00000195812	processed_pseudogene		3	1	33621608	796
ENSMUSG00000042638	protein_coding	Gucy2c	ENSMUST00000032338	protein_coding	alternative2	6	-1	136781765	3959
ENSMUSG00000113499	processed_pseudogene	Gm18500	ENSMUST00000223493	processed_pseudogene		12	-1	92473961	820
ENSMUSG00000104954	processed_pseudogene	Gm42694	ENSMUST00000196951	processed_pseudogene		3	-1	33684865	358
ENSMUSG00000068391	protein_coding	Chrac1	ENSMUST00000089765	protein_coding	principal2	15	1	73090392	871
ENSMUSG00000042814	protein_coding	Mcts2	ENSMUST00000062148	protein_coding	principal1	2	1	152687035	912
ENSMUSG00000117183	processed_pseudogene	Gm20008	ENSMUST00000232973	processed_pseudogene		17	-1	22716937	2370
ENSMUSG00000068391	protein_coding	Chrac1	ENSMUST00000134353	protein_coding	alternative2	15	1	73090392	538
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000239442	protein_coding	principal4	7	1	112679320	9962
ENSMUSG00000042638	protein_coding	Gucy2c	ENSMUST00000078095	protein_coding	principal3	6	-1	136781742	3863
ENSMUSG00000106231	processed_pseudogene	Gm18611	ENSMUST00000200334	processed_pseudogene		3	1	33730600	1118
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000239404	protein_coding	alternative1	7	1	112679320	9899
ENSMUSG00000104588	lincRNA	Gm43666	ENSMUST00000197116	lincRNA		3	-1	33759616	2989
ENSMUSG00000068391	protein_coding	Chrac1	ENSMUST00000137698	retained_intron		15	1	73090412	2114
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000113535	protein_coding	alternative1	5	1	74535481	1969
ENSMUSG00000055320	protein_coding	Tead1	ENSMUST00000069256	protein_coding	alternative1	7	1	112759384	9480
ENSMUSG00000092512	processed_pseudogene	Gm4152	ENSMUST00000172675	processed_pseudogene		17	-1	33980758	276
ENSMUSG00000098210	processed_pseudogene	Gm5224	ENSMUST00000183060	processed_pseudogene		17	1	22734963	350
ENSMUSG00000019738	protein_coding	Polr2i	ENSMUST00000019882	protein_coding	principal1	7	1	30231948	819
ENSMUSG00000096055	TR_V_gene	Trav12n-1	ENSMUST00000198682	TR_V_gene	principal5	14	1	53155512	436
ENSMUSG00000109611	processed_pseudogene	Gm45473	ENSMUST00000211452	processed_pseudogene		7	1	112652782	616
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000135377	retained_intron		5	1	74535484	4987
ENSMUSG00000096055	TR_V_gene	Trav12n-1	ENSMUST00000103587	TR_V_gene	alternative2	14	1	53155601	344
ENSMUSG00000073102	protein_coding	Drc1	ENSMUST00000101448	protein_coding	principal1	5	1	30281388	2471
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000120618	protein_coding		5	1	74535503	1480
ENSMUSG00000118084	lincRNA	AA388235	ENSMUST00000235802	lincRNA		17	1	33981494	717
ENSMUSG00000019738	protein_coding	Polr2i	ENSMUST00000149654	protein_coding		7	1	30232032	604
ENSMUSG00000104629	TR_V_gene	Trav13n-1	ENSMUST00000198359	TR_V_gene	principal1	14	1	53162399	331
ENSMUSG00000020265	protein_coding	Sumo3	ENSMUST00000020501	protein_coding	principal3	10	1	77606097	2630
ENSMUSG00000025077	protein_coding	Dclre1a	ENSMUST00000183143	nonsense_mediated_decay		19	-1	56548147	4156
ENSMUSG00000043924	protein_coding	Ncmap	ENSMUST00000105859	protein_coding	principal1	4	-1	135398190	1801
ENSMUSG00000098164	lincRNA	Gm5493	ENSMUST00000182063	lincRNA		17	1	22739945	1951
ENSMUSG00000073102	protein_coding	Drc1	ENSMUST00000200399	processed_transcript		5	1	30341780	232
ENSMUSG00000019738	protein_coding	Polr2i	ENSMUST00000108193	protein_coding		7	1	30232332	488
ENSMUSG00000025077	protein_coding	Dclre1a	ENSMUST00000182058	retained_intron		19	-1	56547155	4664
ENSMUSG00000096827	TR_V_gene	Trav14n-1	ENSMUST00000196639	TR_V_gene	principal5	14	1	53166626	415
ENSMUSG00000073427	protein_coding	Gm4924	ENSMUST00000211099	protein_coding		10	1	82354255	490
ENSMUSG00000096827	TR_V_gene	Trav14n-1	ENSMUST00000177578	TR_V_gene	alternative2	14	1	53166677	340
ENSMUSG00000073102	protein_coding	Drc1	ENSMUST00000200183	processed_transcript		5	1	30345916	554
ENSMUSG00000019738	protein_coding	Polr2i	ENSMUST00000108192	protein_coding		7	1	30232332	508
ENSMUSG00000043924	protein_coding	Ncmap	ENSMUST00000105860	protein_coding		4	-1	135398221	2000
ENSMUSG00000105194	processed_pseudogene	Gm6755	ENSMUST00000100598	processed_pseudogene		14	-1	53173590	864
ENSMUSG00000020265	protein_coding	Sumo3	ENSMUST00000137841	nonsense_mediated_decay		10	1	77606209	1005
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000121950	retained_intron		5	1	74535684	1445
ENSMUSG00000073427	protein_coding	Gm4924	ENSMUST00000210025	nonsense_mediated_decay		10	1	82354259	947
ENSMUSG00000073102	protein_coding	Drc1	ENSMUST00000198023	processed_transcript		5	1	30354139	382
ENSMUSG00000073427	protein_coding	Gm4924	ENSMUST00000211078	nonsense_mediated_decay		10	1	82354296	1531
ENSMUSG00000112532	lincRNA	Gm36283	ENSMUST00000217857	lincRNA		10	1	108417251	392
ENSMUSG00000094413	TR_V_gene	Trav15n-1	ENSMUST00000197433	TR_V_gene	principal5	14	1	53174325	352
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000200979	processed_transcript		5	1	74535979	603
ENSMUSG00000112532	lincRNA	Gm36283	ENSMUST00000218418	lincRNA		10	1	108436665	2137
ENSMUSG00000020265	protein_coding	Sumo3	ENSMUST00000129492	protein_coding	alternative2	10	1	77606225	487
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000159961	protein_coding		2	1	92228479	1735
ENSMUSG00000094413	TR_V_gene	Trav15n-1	ENSMUST00000103590	TR_V_gene	alternative2	14	1	53174325	349
ENSMUSG00000106311	sense_intronic	Gm43755	ENSMUST00000200001	sense_intronic		5	1	30366046	408
ENSMUSG00000112532	lincRNA	Gm36283	ENSMUST00000220211	lincRNA		10	1	108446602	3732
ENSMUSG00000043924	protein_coding	Ncmap	ENSMUST00000105857	protein_coding	principal1	4	-1	135385645	958
ENSMUSG00000039033	protein_coding	Tasp1	ENSMUST00000110079	protein_coding	principal1	2	-1	140066805	2258
ENSMUSG00000073427	protein_coding	Gm4924	ENSMUST00000210381	protein_coding	principal1	10	1	82354316	3330
ENSMUSG00000020265	protein_coding	Sumo3	ENSMUST00000141228	protein_coding		10	1	77606225	772
ENSMUSG00000105070	TR_V_pseudogene	Trav3n-2	ENSMUST00000197693	TR_V_pseudogene		14	1	53198525	334
ENSMUSG00000039640	protein_coding	Mrpl12	ENSMUST00000043627	protein_coding	principal1	11	1	120484613	1316
ENSMUSG00000117333	processed_pseudogene	Gm16386	ENSMUST00000233975	processed_pseudogene		17	-1	22807736	1533
ENSMUSG00000073427	protein_coding	Gm4924	ENSMUST00000165906	protein_coding		10	1	82378593	2645
ENSMUSG00000081196	unprocessed_pseudogene	Gm13858	ENSMUST00000118862	unprocessed_pseudogene		6	-1	34380445	671
ENSMUSG00000019738	protein_coding	Polr2i	ENSMUST00000145559	retained_intron		7	1	30232342	578
ENSMUSG00000020952	protein_coding	Scfd1	ENSMUST00000021335	protein_coding	principal1	12	1	51377580	2096
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000200787	retained_intron		5	1	74584737	586
ENSMUSG00000020265	protein_coding	Sumo3	ENSMUST00000099538	protein_coding	alternative2	10	1	77606571	1874
ENSMUSG00000081991	unprocessed_pseudogene	Gm13859	ENSMUST00000119936	unprocessed_pseudogene		6	-1	34380789	1423
ENSMUSG00000038351	protein_coding	Sgsm2	ENSMUST00000057631	protein_coding	principal2	11	-1	74897060	4743
ENSMUSG00000043924	protein_coding	Ncmap	ENSMUST00000134717	processed_transcript		4	-1	135374688	354
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000202499	retained_intron		5	1	74584782	425
ENSMUSG00000019738	protein_coding	Polr2i	ENSMUST00000138118	retained_intron		7	1	30232350	435
ENSMUSG00000039640	protein_coding	Mrpl12	ENSMUST00000137619	processed_transcript		11	1	120485027	768
ENSMUSG00000097487	protein_coding	Ptges3l	ENSMUST00000107252	protein_coding	alternative2	11	-1	101424669	853
ENSMUSG00000039648	protein_coding	Kyat1	ENSMUST00000044038	protein_coding	principal1	2	-1	30205847	1876
ENSMUSG00000039033	protein_coding	Tasp1	ENSMUST00000046656	protein_coding	principal1	2	-1	140066760	2480
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000201310	retained_intron		5	1	74586129	2290
ENSMUSG00000020265	protein_coding	Sumo3	ENSMUST00000173691	protein_coding		10	1	77609838	364
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000172856	protein_coding	principal1	8	1	111536097	4600
ENSMUSG00000040543	protein_coding	Pitpnm3	ENSMUST00000075258	protein_coding	principal3	11	-1	72135778	6555
ENSMUSG00000043924	protein_coding	Ncmap	ENSMUST00000123632	protein_coding		4	-1	135385672	373
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000139697	retained_intron		5	1	74586803	540
ENSMUSG00000019738	protein_coding	Polr2i	ENSMUST00000150841	processed_transcript		7	1	30232603	451
ENSMUSG00000043924	protein_coding	Ncmap	ENSMUST00000154518	protein_coding		4	-1	135398227	640
ENSMUSG00000029227	protein_coding	Fip1l1	ENSMUST00000125129	retained_intron		5	1	74594720	584
ENSMUSG00000097487	protein_coding	Ptges3l	ENSMUST00000103102	protein_coding	principal2	11	-1	101425333	1463
ENSMUSG00000030470	protein_coding	Csrp3	ENSMUST00000167786	protein_coding	principal1	7	-1	48843651	899
ENSMUSG00000038351	protein_coding	Sgsm2	ENSMUST00000081799	protein_coding	alternative2	11	-1	74897060	4873
ENSMUSG00000066749	protein_coding	Olfr877	ENSMUST00000213956	protein_coding	principal1	9	1	37854269	2761
ENSMUSG00000019738	protein_coding	Polr2i	ENSMUST00000138886	retained_intron		7	1	30232932	285
ENSMUSG00000040543	protein_coding	Pitpnm3	ENSMUST00000134210	processed_transcript		11	-1	72052049	461
ENSMUSG00000039648	protein_coding	Kyat1	ENSMUST00000113662	protein_coding	principal1	2	-1	30205775	1850
ENSMUSG00000031510	lincRNA	1700128E19Rik	ENSMUST00000134409	lincRNA		8	1	11713264	2439
ENSMUSG00000039033	protein_coding	Tasp1	ENSMUST00000124949	retained_intron		2	-1	140042214	1589
ENSMUSG00000066749	protein_coding	Olfr877	ENSMUST00000086063	protein_coding	principal1	9	1	37854820	936
ENSMUSG00000110313	processed_pseudogene	Gm45420	ENSMUST00000211243	processed_pseudogene		8	-1	11715239	425
ENSMUSG00000043924	protein_coding	Ncmap	ENSMUST00000064481	protein_coding	principal1	4	-1	135385672	1448
ENSMUSG00000097487	protein_coding	Ptges3l	ENSMUST00000093933	protein_coding	alternative2	11	-1	101424669	748
ENSMUSG00000038351	protein_coding	Sgsm2	ENSMUST00000123573	retained_intron		11	-1	74860575	2404
ENSMUSG00000039033	protein_coding	Tasp1	ENSMUST00000099304	protein_coding		2	-1	140066785	2127
ENSMUSG00000020265	protein_coding	Sumo3	ENSMUST00000124024	protein_coding		10	1	77613709	776
ENSMUSG00000097487	protein_coding	Ptges3l	ENSMUST00000149706	protein_coding		11	-1	101423856	401
ENSMUSG00000030470	protein_coding	Csrp3	ENSMUST00000032658	protein_coding	principal1	7	-1	48848033	877
ENSMUSG00000043870	processed_pseudogene	Gm5809	ENSMUST00000121854	processed_pseudogene		16	1	22230391	529
ENSMUSG00000040543	protein_coding	Pitpnm3	ENSMUST00000132781	retained_intron		11	-1	72061561	879
ENSMUSG00000020265	protein_coding	Sumo3	ENSMUST00000174295	processed_transcript		10	1	77615133	516
ENSMUSG00000020952	protein_coding	Scfd1	ENSMUST00000219799	retained_intron		12	1	51377581	2534
ENSMUSG00000097487	protein_coding	Ptges3l	ENSMUST00000150957	retained_intron		11	-1	101424232	367
ENSMUSG00000020952	protein_coding	Scfd1	ENSMUST00000218131	retained_intron		12	1	51377592	6842
ENSMUSG00000038351	protein_coding	Sgsm2	ENSMUST00000156287	retained_intron		11	-1	74869092	706
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000095176	protein_coding	principal1	8	1	111536842	3108
ENSMUSG00000020875	protein_coding	Hoxb9	ENSMUST00000000010	protein_coding	principal1	11	1	96271457	2574
ENSMUSG00000075117	protein_coding	Olfr1198	ENSMUST00000215179	protein_coding	principal1	2	-1	88751346	3145
ENSMUSG00000030470	protein_coding	Csrp3	ENSMUST00000208146	retained_intron		7	-1	48839560	2433
ENSMUSG00000040543	protein_coding	Pitpnm3	ENSMUST00000142471	retained_intron		11	-1	72135778	3993
ENSMUSG00000038351	protein_coding	Sgsm2	ENSMUST00000148421	retained_intron		11	-1	74868388	618
ENSMUSG00000024459	protein_coding	H2-M5	ENSMUST00000145260	retained_intron		17	-1	36989537	2459
ENSMUSG00000030470	protein_coding	Csrp3	ENSMUST00000208050	protein_coding		7	-1	48845219	362
ENSMUSG00000075117	protein_coding	Olfr1198	ENSMUST00000215529	protein_coding	principal1	2	-1	88751370	3413
ENSMUSG00000040543	protein_coding	Pitpnm3	ENSMUST00000108508	protein_coding	alternative2	11	-1	72135721	6450
ENSMUSG00000113194	processed_pseudogene	Gm47998	ENSMUST00000223384	processed_pseudogene		12	-1	92998151	387
ENSMUSG00000075117	protein_coding	Olfr1198	ENSMUST00000099814	protein_coding	principal1	2	-1	88746886	927
ENSMUSG00000098043	processed_pseudogene	Gm26980	ENSMUST00000183321	processed_pseudogene		16	1	22236921	395
ENSMUSG00000020952	protein_coding	Scfd1	ENSMUST00000219686	retained_intron		12	1	51422694	707
ENSMUSG00000103505	TEC	Gm38374	ENSMUST00000194417	TEC		1	-1	84809190	2033
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000173506	protein_coding	principal1	8	1	111537120	1238
ENSMUSG00000106391	TEC	Gm42690	ENSMUST00000197921	TEC		5	1	100429726	1836
ENSMUSG00000116761	processed_pseudogene	Gm36796	ENSMUST00000232582	processed_pseudogene		16	1	22244168	305
ENSMUSG00000020875	protein_coding	Hoxb9	ENSMUST00000174042	protein_coding		11	1	96271523	2269
ENSMUSG00000005338	protein_coding	Cadm3	ENSMUST00000111220	protein_coding	principal2	1	-1	173367695	5155
ENSMUSG00000112065	processed_pseudogene	Gm47466	ENSMUST00000217917	processed_pseudogene		10	1	108482650	342
ENSMUSG00000020952	protein_coding	Scfd1	ENSMUST00000218138	nonsense_mediated_decay		12	1	51422930	1017
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000173726	protein_coding		8	1	111537463	549
ENSMUSG00000102418	protein_coding	Sh2d1b1	ENSMUST00000179976	protein_coding	principal1	1	1	170277320	2544
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000027111	protein_coding	principal1	1	-1	63176822	2661
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000198139	protein_coding		3	-1	148828548	3005
ENSMUSG00000006095	protein_coding	Tbcb	ENSMUST00000006254	protein_coding	principal1	7	-1	30232272	1416
ENSMUSG00000096964	transcribed_unprocessed_pseudogene	Gm6345	ENSMUST00000180378	processed_transcript		1	-1	170255739	1691
ENSMUSG00000048429	protein_coding	Timm29	ENSMUST00000062125	protein_coding	principal1	9	1	21592722	3170
ENSMUSG00000039648	protein_coding	Kyat1	ENSMUST00000148555	processed_transcript		2	-1	30205816	2038
ENSMUSG00000096964	transcribed_unprocessed_pseudogene	Gm6345	ENSMUST00000180900	transcribed_unprocessed_pseudogene		1	-1	170255580	204
ENSMUSG00000005338	protein_coding	Cadm3	ENSMUST00000005470	protein_coding	alternative1	1	-1	173367685	2518
ENSMUSG00000001151	protein_coding	Pcnt	ENSMUST00000217838	protein_coding	alternative2	10	-1	76442786	9341
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000200216	protein_coding		3	-1	148823771	2300
ENSMUSG00000025077	protein_coding	Dclre1a	ENSMUST00000182276	protein_coding	principal1	19	-1	56548222	4066
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000187835	retained_intron		1	-1	63147723	826
ENSMUSG00000029375	protein_coding	Cxcl15	ENSMUST00000031322	protein_coding	principal1	5	1	90794534	2127
ENSMUSG00000035007	protein_coding	Rundc1	ENSMUST00000040561	protein_coding	principal1	11	1	101425085	3223
ENSMUSG00000005338	protein_coding	Cadm3	ENSMUST00000136540	retained_intron		1	-1	173341926	855
ENSMUSG00000006095	protein_coding	Tbcb	ENSMUST00000169358	processed_transcript		7	-1	30227000	396
ENSMUSG00000106702	antisense	Gm42846	ENSMUST00000201771	antisense		5	1	34173887	514
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000187756	nonsense_mediated_decay		1	-1	63147391	493
ENSMUSG00000025077	protein_coding	Dclre1a	ENSMUST00000183216	retained_intron		19	-1	56537382	478
ENSMUSG00000006095	protein_coding	Tbcb	ENSMUST00000141608	retained_intron		7	-1	30227061	502
ENSMUSG00000001151	protein_coding	Pcnt	ENSMUST00000219011	retained_intron		10	-1	76353510	2244
ENSMUSG00000025077	protein_coding	Dclre1a	ENSMUST00000181992	processed_transcript		19	-1	56541545	322
ENSMUSG00000037235	protein_coding	Mxd4	ENSMUST00000201189	processed_transcript		5	-1	34175336	787
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000162497	protein_coding		2	1	92184302	337
ENSMUSG00000073633	protein_coding	Fbxo36	ENSMUST00000097672	protein_coding	principal1	1	1	84839841	901
ENSMUSG00000084218	processed_pseudogene	Gm8145	ENSMUST00000118220	processed_pseudogene		5	1	107241623	745
ENSMUSG00000117883	processed_pseudogene	Gm50380	ENSMUST00000237701	processed_pseudogene		19	-1	29875217	581
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000174376	nonsense_mediated_decay		8	1	111537487	501
ENSMUSG00000106643	TEC	Gm43422	ENSMUST00000199780	TEC		5	-1	107135688	3571
ENSMUSG00000000903	protein_coding	Vpreb3	ENSMUST00000121151	protein_coding		10	1	75943057	729
ENSMUSG00000039648	protein_coding	Kyat1	ENSMUST00000113661	protein_coding	principal1	2	-1	30198359	2057
ENSMUSG00000025077	protein_coding	Dclre1a	ENSMUST00000182059	protein_coding		19	-1	56548026	899
ENSMUSG00000106671	TEC	Gm42900	ENSMUST00000197184	TEC		5	-1	107256504	2167
ENSMUSG00000005338	protein_coding	Cadm3	ENSMUST00000157032	retained_intron		1	-1	173367648	2746
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000174454	protein_coding		8	1	111537578	494
ENSMUSG00000105033	TEC	Gm43423	ENSMUST00000198390	TEC		5	-1	107160571	2094
ENSMUSG00000005338	protein_coding	Cadm3	ENSMUST00000126963	retained_intron		1	-1	173367633	774
ENSMUSG00000001151	protein_coding	Pcnt	ENSMUST00000001179	protein_coding	principal2	10	-1	76442726	9331
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000168099	protein_coding	principal1	1	-1	63176732	2590
ENSMUSG00000073494	protein_coding	Sh2d1b2	ENSMUST00000162752	protein_coding	principal1	1	1	170232749	2542
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000174333	protein_coding		8	1	111538343	515
ENSMUSG00000037872	protein_coding	Ackr1	ENSMUST00000194298	processed_transcript		1	-1	173333750	167
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000173481	processed_transcript		8	1	111538465	413
ENSMUSG00000000903	protein_coding	Vpreb3	ENSMUST00000000926	protein_coding	principal1	10	1	75948300	625
ENSMUSG00000073494	protein_coding	Sh2d1b2	ENSMUST00000097470	nonsense_mediated_decay		1	1	170232777	495
ENSMUSG00000001151	protein_coding	Pcnt	ENSMUST00000219243	nonsense_mediated_decay		10	-1	76368833	875
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000185847	protein_coding		1	-1	63176663	655
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000173781	protein_coding		8	1	111541259	337
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000186569	retained_intron		1	-1	63152842	2610
ENSMUSG00000001151	protein_coding	Pcnt	ENSMUST00000219403	retained_intron		10	-1	76356222	724
ENSMUSG00000039648	protein_coding	Kyat1	ENSMUST00000113663	protein_coding	principal1	2	-1	30205801	2026
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000173692	processed_transcript		8	1	111561840	446
ENSMUSG00000009293	protein_coding	Ube2g2	ENSMUST00000174510	protein_coding	principal1	10	1	77622275	2031
ENSMUSG00000037872	protein_coding	Ackr1	ENSMUST00000038227	protein_coding	principal1	1	-1	173333502	1153
ENSMUSG00000082234	processed_pseudogene	Gm16221	ENSMUST00000117331	processed_pseudogene		10	-1	75945687	393
ENSMUSG00000001151	protein_coding	Pcnt	ENSMUST00000218747	retained_intron		10	-1	76367536	498
ENSMUSG00000001151	protein_coding	Pcnt	ENSMUST00000219701	processed_transcript		10	-1	76414032	1550
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000173922	nonsense_mediated_decay		8	1	111606748	559
ENSMUSG00000106957	TEC	Gm43085	ENSMUST00000202859	TEC		5	1	90803261	3132
ENSMUSG00000039648	protein_coding	Kyat1	ENSMUST00000113659	protein_coding		2	-1	30194112	1367
ENSMUSG00000039648	protein_coding	Kyat1	ENSMUST00000113660	protein_coding		2	-1	30194112	1388
ENSMUSG00000093813	TR_V_gene	Trav9n-2	ENSMUST00000198913	TR_V_gene	principal5	14	1	53203122	340
ENSMUSG00000073633	protein_coding	Fbxo36	ENSMUST00000139562	processed_transcript		1	1	84866436	881
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000173819	protein_coding		8	1	111609296	297
ENSMUSG00000009293	protein_coding	Ube2g2	ENSMUST00000172813	protein_coding		10	1	77622313	404
ENSMUSG00000037872	protein_coding	Ackr1	ENSMUST00000194046	protein_coding		1	-1	173333673	1122
ENSMUSG00000104433	TEC	Gm37426	ENSMUST00000195241	TEC		1	1	32710179	2470
ENSMUSG00000073633	protein_coding	Fbxo36	ENSMUST00000151737	processed_transcript		1	1	84869151	1713
ENSMUSG00000039648	protein_coding	Kyat1	ENSMUST00000149522	processed_transcript		2	-1	30205789	765
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000162188	protein_coding		2	1	92184792	370
ENSMUSG00000073633	protein_coding	Fbxo36	ENSMUST00000143656	processed_transcript		1	1	84839853	1088
ENSMUSG00000009293	protein_coding	Ube2g2	ENSMUST00000174546	nonsense_mediated_decay		10	1	77622323	430
ENSMUSG00000085378	lincRNA	Gm11415	ENSMUST00000128214	lincRNA		4	-1	83888858	480
ENSMUSG00000101695	antisense	1700094J05Rik	ENSMUST00000190491	antisense		10	1	76389015	997
ENSMUSG00000107044	lincRNA	Gm43086	ENSMUST00000202536	lincRNA		5	1	90832328	2657
ENSMUSG00000093813	TR_V_gene	Trav9n-2	ENSMUST00000180097	TR_V_gene	alternative2	14	1	53203122	337
ENSMUSG00000009293	protein_coding	Ube2g2	ENSMUST00000172772	protein_coding		10	1	77622378	288
ENSMUSG00000085217	lincRNA	6030471H07Rik	ENSMUST00000125884	lincRNA		4	-1	84044879	492
ENSMUSG00000101695	antisense	1700094J05Rik	ENSMUST00000187079	antisense		10	1	76398593	368
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000171182	protein_coding		8	1	111536640	5466
ENSMUSG00000117965	protein_coding	AC141477.1	ENSMUST00000235907	protein_coding	principal1	10	-1	76440444	204
ENSMUSG00000075528	protein_coding	Aarsd1	ENSMUST00000070395	protein_coding	principal1	11	-1	101417615	1516
ENSMUSG00000083044	processed_pseudogene	Gm12416	ENSMUST00000120911	processed_pseudogene		4	1	84104895	1008
ENSMUSG00000038022	protein_coding	Mindy4	ENSMUST00000204842	protein_coding		6	1	55203383	2211
ENSMUSG00000021375	protein_coding	Kif13a	ENSMUST00000056978	protein_coding	principal1	13	-1	46929718	6866
ENSMUSG00000009293	protein_coding	Ube2g2	ENSMUST00000173360	retained_intron		10	1	77641186	596
ENSMUSG00000095572	TR_V_gene	Trav4n-3	ENSMUST00000103618	TR_V_gene	principal1	14	1	53210906	331
ENSMUSG00000087378	lincRNA	Gm12414	ENSMUST00000150794	lincRNA		4	-1	84130289	494
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000185827	retained_intron		1	-1	63176669	1775
ENSMUSG00000024459	protein_coding	H2-M5	ENSMUST00000169189	protein_coding	principal1	17	-1	36989504	1170
ENSMUSG00000113164	lincRNA	4930559C10Rik	ENSMUST00000223202	lincRNA		12	-1	93444823	649
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000168428	protein_coding	principal1	8	1	111536640	4451
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000140612	retained_intron		1	-1	63176667	1922
ENSMUSG00000102926	TEC	Gm37151	ENSMUST00000194631	TEC		1	-1	32972490	5007
ENSMUSG00000033545	protein_coding	Znrf1	ENSMUST00000166859	protein_coding		8	1	111538343	3650
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000188370	protein_coding		1	-1	63176690	516
ENSMUSG00000100497	processed_pseudogene	Gm28624	ENSMUST00000186430	processed_pseudogene		1	-1	33030290	2131
ENSMUSG00000059142	protein_coding	Zfp945	ENSMUST00000160457	protein_coding	alternative2	17	-1	22867134	6618
ENSMUSG00000096681	processed_pseudogene	Rps19-ps1	ENSMUST00000168472	processed_pseudogene		14	1	53213730	438
ENSMUSG00000021375	protein_coding	Kif13a	ENSMUST00000223881	protein_coding		13	-1	46786638	3917
ENSMUSG00000102917	lincRNA	Gm37724	ENSMUST00000195240	lincRNA		1	1	33065130	1221
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000185732	protein_coding		1	-1	63176666	651
ENSMUSG00000112982	processed_pseudogene	Gm21007	ENSMUST00000221024	processed_pseudogene		12	1	93716420	326
ENSMUSG00000105956	TR_V_pseudogene	Trav5n-2	ENSMUST00000197136	TR_V_pseudogene		14	1	53225402	275
ENSMUSG00000024459	protein_coding	H2-M5	ENSMUST00000176784	protein_coding		17	-1	36989188	982
ENSMUSG00000112241	protein_coding	Gm49325	ENSMUST00000174113	nonsense_mediated_decay	principal1	10	1	77606197	512
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000185412	protein_coding		1	-1	63176793	368
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000226345	protein_coding	principal1	6	1	89883660	1965
ENSMUSG00000024459	protein_coding	H2-M5	ENSMUST00000176712	protein_coding		17	-1	36989188	955
ENSMUSG00000021375	protein_coding	Kif13a	ENSMUST00000225836	protein_coding		13	-1	46752543	649
ENSMUSG00000063409	protein_coding	Lrrc43	ENSMUST00000196809	protein_coding	alternative2	5	1	123489305	2031
ENSMUSG00000094935	processed_pseudogene	Gm9726	ENSMUST00000180321	processed_pseudogene		12	-1	93928670	678
ENSMUSG00000113113	processed_pseudogene	Gm2614	ENSMUST00000223227	processed_pseudogene		12	-1	100744935	403
ENSMUSG00000037235	protein_coding	Mxd4	ENSMUST00000042701	protein_coding	principal1	5	-1	34187710	3872
ENSMUSG00000075528	protein_coding	Aarsd1	ENSMUST00000133240	processed_transcript		11	-1	101417384	778
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000204656	protein_coding	principal1	6	1	89883660	1737
ENSMUSG00000025968	protein_coding	Ndufs1	ENSMUST00000189664	protein_coding		1	-1	63176833	332
ENSMUSG00000024459	protein_coding	H2-M5	ENSMUST00000113667	protein_coding		17	-1	36989045	414
ENSMUSG00000096531	TR_V_gene	Trav12n-2	ENSMUST00000196674	TR_V_gene	principal5	14	1	53226773	454
ENSMUSG00000100481	processed_pseudogene	Gm7114	ENSMUST00000190159	processed_pseudogene		1	1	33100907	1789
ENSMUSG00000031958	protein_coding	Ldhd	ENSMUST00000173909	retained_intron		8	-1	111628587	4102
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000227456	protein_coding	principal1	6	1	89883660	2031
ENSMUSG00000021375	protein_coding	Kif13a	ENSMUST00000224756	protein_coding		13	-1	46791448	686
ENSMUSG00000081617	processed_pseudogene	Rps13-ps7	ENSMUST00000122045	processed_pseudogene		1	1	63038214	368
ENSMUSG00000075528	protein_coding	Aarsd1	ENSMUST00000140123	retained_intron		11	-1	101417382	914
ENSMUSG00000113818	processed_pseudogene	Gm7119	ENSMUST00000221345	processed_pseudogene		12	-1	94001981	695
ENSMUSG00000096531	TR_V_gene	Trav12n-2	ENSMUST00000103619	TR_V_gene	alternative2	14	1	53226883	341
ENSMUSG00000107941	processed_pseudogene	Gm44010	ENSMUST00000204432	processed_pseudogene		6	1	115109339	331
ENSMUSG00000037235	protein_coding	Mxd4	ENSMUST00000119171	protein_coding		5	-1	34187720	1160
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000227047	protein_coding	principal1	6	1	89883660	1803
ENSMUSG00000075528	protein_coding	Aarsd1	ENSMUST00000189049	retained_intron		11	-1	101414579	817
ENSMUSG00000081429	processed_pseudogene	Rps27-ps1	ENSMUST00000118179	processed_pseudogene		1	1	63073774	246
ENSMUSG00000021375	protein_coding	Kif13a	ENSMUST00000225591	protein_coding		13	-1	46895705	3426
ENSMUSG00000037235	protein_coding	Mxd4	ENSMUST00000201763	retained_intron		5	-1	34184370	4627
ENSMUSG00000075528	protein_coding	Aarsd1	ENSMUST00000125472	retained_intron		11	-1	101417406	544
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000226120	protein_coding		6	1	89883660	1772
ENSMUSG00000017774	protein_coding	Myo1c	ENSMUST00000102505	protein_coding	alternative1	11	1	75650504	4652
ENSMUSG00000021375	protein_coding	Kif13a	ENSMUST00000223856	protein_coding		13	-1	46788211	374
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000227888	protein_coding		6	1	89883660	1544
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000228183	protein_coding		6	1	89883660	1838
ENSMUSG00000059142	protein_coding	Zfp945	ENSMUST00000088696	protein_coding	principal4	17	-1	22867105	5683
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000227625	protein_coding		6	1	89883660	1610
ENSMUSG00000021375	protein_coding	Kif13a	ENSMUST00000225904	retained_intron		13	-1	46794048	707
ENSMUSG00000097486	bidirectional_promoter_lncRNA	Gm17733	ENSMUST00000181883	bidirectional_promoter_lncRNA		6	-1	115134835	1048
ENSMUSG00000037860	protein_coding	Aim2	ENSMUST00000147604	protein_coding	principal1	1	1	173350879	2839
ENSMUSG00000021375	protein_coding	Kif13a	ENSMUST00000238722	protein_coding		13	-1	46809057	501
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000226760	protein_coding	principal1	6	1	89886677	2070
ENSMUSG00000038022	protein_coding	Mindy4	ENSMUST00000053094	protein_coding	principal1	6	1	55203383	4270
ENSMUSG00000096541	TR_V_gene	Trav9n-3	ENSMUST00000177705	TR_V_gene	principal1	14	1	53231433	575
ENSMUSG00000037860	protein_coding	Aim2	ENSMUST00000174263	processed_transcript		1	1	173419196	383
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000228700	protein_coding	principal1	6	1	89886677	2004
ENSMUSG00000037860	protein_coding	Aim2	ENSMUST00000173023	protein_coding		1	1	173420598	744
ENSMUSG00000050763	protein_coding	Olfr1395	ENSMUST00000203377	protein_coding	principal1	11	1	49142274	2883
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000226171	protein_coding		6	1	89886677	1877
ENSMUSG00000021375	protein_coding	Kif13a	ENSMUST00000224457	processed_transcript		13	-1	46929717	309
ENSMUSG00000109178	processed_pseudogene	Gm3257	ENSMUST00000207217	processed_pseudogene		7	1	61938237	675
ENSMUSG00000013646	protein_coding	Sh3bp5l	ENSMUST00000073128	protein_coding	principal1	11	1	58330750	2977
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000153965	protein_coding	alternative2	9	1	102716802	4222
ENSMUSG00000050763	protein_coding	Olfr1395	ENSMUST00000214195	protein_coding	principal1	11	1	49142274	2984
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000227747	protein_coding		6	1	89886677	1811
ENSMUSG00000059142	protein_coding	Zfp945	ENSMUST00000095615	retained_intron		17	-1	22861719	4078
ENSMUSG00000031958	protein_coding	Ldhd	ENSMUST00000173521	retained_intron		8	-1	111630335	3402
ENSMUSG00000105467	TR_V_pseudogene	Trav5n-3	ENSMUST00000164511	TR_V_pseudogene		14	1	53239284	270
ENSMUSG00000037860	protein_coding	Aim2	ENSMUST00000151176	protein_coding		1	1	173454971	326
ENSMUSG00000021375	protein_coding	Kif13a	ENSMUST00000224923	processed_transcript		13	-1	46929867	703
ENSMUSG00000038022	protein_coding	Mindy4	ENSMUST00000203225	processed_transcript		6	1	55278155	690
ENSMUSG00000031755	protein_coding	Bbs2	ENSMUST00000034206	protein_coding	principal1	8	-1	94098928	3064
ENSMUSG00000013646	protein_coding	Sh3bp5l	ENSMUST00000149701	processed_transcript		11	1	58331043	329
ENSMUSG00000059142	protein_coding	Zfp945	ENSMUST00000127557	retained_intron		17	-1	22867134	3762
ENSMUSG00000050763	protein_coding	Olfr1395	ENSMUST00000059379	protein_coding	principal1	11	1	49148259	954
ENSMUSG00000068234	protein_coding	Vmn1r44	ENSMUST00000089420	protein_coding	principal1	6	1	89893177	1108
ENSMUSG00000037860	protein_coding	Aim2	ENSMUST00000192575	processed_transcript		1	1	173455354	363
ENSMUSG00000063409	protein_coding	Lrrc43	ENSMUST00000094327	protein_coding	principal3	5	1	123489325	2046
ENSMUSG00000013646	protein_coding	Sh3bp5l	ENSMUST00000154278	processed_transcript		11	1	58331275	6171
ENSMUSG00000117002	processed_pseudogene	Gm32892	ENSMUST00000233007	processed_pseudogene		17	1	22873486	516
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000153911	protein_coding		9	1	102717289	807
ENSMUSG00000107766	antisense	Gm44073	ENSMUST00000204173	antisense		6	-1	55307886	429
ENSMUSG00000037860	protein_coding	Aim2	ENSMUST00000135370	processed_transcript		1	1	173455488	372
ENSMUSG00000093915	TR_V_gene	Trav12n-3	ENSMUST00000179583	TR_V_gene	principal1	14	1	53240745	353
ENSMUSG00000111959	processed_pseudogene	Gm18503	ENSMUST00000220340	processed_pseudogene		12	1	51517326	728
ENSMUSG00000114917	antisense	Gm48250	ENSMUST00000225017	antisense		13	1	46881027	771
ENSMUSG00000013646	protein_coding	Sh3bp5l	ENSMUST00000127119	processed_transcript		11	1	58345312	510
ENSMUSG00000117141	processed_pseudogene	Gm18214	ENSMUST00000233639	processed_pseudogene		17	1	22895714	1882
ENSMUSG00000037860	protein_coding	Aim2	ENSMUST00000166137	protein_coding	principal1	1	1	173455354	2079
ENSMUSG00000031755	protein_coding	Bbs2	ENSMUST00000170208	retained_intron		8	-1	94070213	491
ENSMUSG00000109321	processed_transcript	A330076H08Rik	ENSMUST00000208822	lincRNA		7	-1	61982358	1164
ENSMUSG00000068466	processed_pseudogene	Gm5518	ENSMUST00000084171	processed_pseudogene		19	1	29160118	645
ENSMUSG00000029380	protein_coding	Cxcl1	ENSMUST00000031327	protein_coding	principal1	5	1	90891241	953
ENSMUSG00000109321	processed_transcript	A330076H08Rik	ENSMUST00000207694	lincRNA		7	-1	61982303	1836
ENSMUSG00000048378	protein_coding	Olfr1394	ENSMUST00000216273	protein_coding	principal1	11	1	49154377	3024
ENSMUSG00000013646	protein_coding	Sh3bp5l	ENSMUST00000116376	protein_coding	principal1	11	1	58330724	3016
ENSMUSG00000063409	protein_coding	Lrrc43	ENSMUST00000121444	protein_coding	alternative2	5	1	123489327	2016
ENSMUSG00000109321	processed_transcript	A330076H08Rik	ENSMUST00000207224	retained_intron		7	-1	61982356	2510
ENSMUSG00000099294	protein_coding	Gm11214	ENSMUST00000184252	protein_coding	principal1	4	-1	63662910	552
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000162146	protein_coding		2	1	92184276	535
ENSMUSG00000031755	protein_coding	Bbs2	ENSMUST00000172347	retained_intron		8	-1	94079756	522
ENSMUSG00000029380	protein_coding	Cxcl1	ENSMUST00000201245	retained_intron		5	1	90891243	1871
ENSMUSG00000108371	lincRNA	Gm38832	ENSMUST00000205674	lincRNA		6	1	72162849	400
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000066431	protein_coding	alternative1	11	-1	6065545	1603
ENSMUSG00000048378	protein_coding	Olfr1394	ENSMUST00000052668	protein_coding	principal1	11	1	49160016	939
ENSMUSG00000024966	protein_coding	Stip1	ENSMUST00000025918	protein_coding	principal1	19	-1	7039967	2108
ENSMUSG00000113215	processed_pseudogene	Gm18749	ENSMUST00000222410	processed_pseudogene		12	-1	94059701	692
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000159366	protein_coding		2	1	92221570	565
ENSMUSG00000100590	processed_pseudogene	Gm4785	ENSMUST00000191025	processed_pseudogene		1	-1	33109655	751
ENSMUSG00000099294	protein_coding	Gm11214	ENSMUST00000184810	translated_processed_pseudogene		4	-1	63663379	1021
ENSMUSG00000105579	lincRNA	Gm43251	ENSMUST00000198339	lincRNA		5	-1	99171421	2712
ENSMUSG00000104230	lincRNA	Gm37591	ENSMUST00000193283	lincRNA		1	-1	33215475	650
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000222489	retained_intron		13	1	43365496	1943
ENSMUSG00000017774	protein_coding	Myo1c	ENSMUST00000069057	protein_coding	principal3	11	1	75651510	4547
ENSMUSG00000053030	protein_coding	Spink2	ENSMUST00000120429	protein_coding		5	-1	77211438	594
ENSMUSG00000113414	processed_pseudogene	Gm18504	ENSMUST00000220917	processed_pseudogene		12	1	94757575	929
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000161067	protein_coding	alternative2	2	1	92330727	692
ENSMUSG00000056648	protein_coding	Hoxb8	ENSMUST00000052650	protein_coding	principal1	11	1	96281905	2635
ENSMUSG00000113139	processed_pseudogene	Gm48011	ENSMUST00000222320	processed_pseudogene		12	-1	94814481	407
ENSMUSG00000081769	protein_coding	Gm12216	ENSMUST00000153206	processed_transcript		11	-1	53795875	450
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000161044	retained_intron		2	1	92348911	832
ENSMUSG00000114132	processed_pseudogene	Gm4808	ENSMUST00000222283	processed_pseudogene		12	-1	94915682	1203
ENSMUSG00000056648	protein_coding	Hoxb8	ENSMUST00000125410	protein_coding		11	1	96282556	664
ENSMUSG00000045813	lincRNA	Gm9801	ENSMUST00000208965	lincRNA		7	-1	62209479	3003
ENSMUSG00000017774	protein_coding	Myo1c	ENSMUST00000102504	protein_coding	principal3	11	1	75652076	4659
ENSMUSG00000045813	lincRNA	Gm9801	ENSMUST00000054860	pseudogene		7	-1	62118987	408
ENSMUSG00000101754	processed_pseudogene	Gm2987	ENSMUST00000187673	processed_pseudogene		1	1	33235939	1693
ENSMUSG00000081769	protein_coding	Gm12216	ENSMUST00000135815	processed_transcript		11	-1	53859144	298
ENSMUSG00000026192	protein_coding	Atic	ENSMUST00000027384	protein_coding	principal1	1	1	71557150	2845
ENSMUSG00000056648	protein_coding	Hoxb8	ENSMUST00000168043	protein_coding	principal1	11	1	96282725	1141
ENSMUSG00000117901	antisense	AC109619.1	ENSMUST00000236559	antisense		19	-1	7088421	953
ENSMUSG00000027353	protein_coding	Mcm8	ENSMUST00000028831	protein_coding	principal1	2	1	132816141	3179
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000111293	protein_coding		2	1	92184175	3900
ENSMUSG00000029287	protein_coding	Tgfbr3	ENSMUST00000031224	protein_coding	principal1	5	-1	107289629	6087
ENSMUSG00000026192	protein_coding	Atic	ENSMUST00000187982	retained_intron		1	1	71557179	2773
ENSMUSG00000032182	protein_coding	Yipf2	ENSMUST00000078572	protein_coding	principal1	9	-1	21592772	1894
ENSMUSG00000031757	protein_coding	Mt4	ENSMUST00000034207	protein_coding	principal1	8	1	94137197	398
ENSMUSG00000024130	protein_coding	Abca3	ENSMUST00000039013	protein_coding	principal2	17	1	24352023	6476
ENSMUSG00000090355	unprocessed_pseudogene	Vmn2r-ps128	ENSMUST00000176367	unprocessed_pseudogene		17	-1	22932941	2570
ENSMUSG00000027353	protein_coding	Mcm8	ENSMUST00000066559	protein_coding		2	1	132816141	3397
ENSMUSG00000097239	protein_coding	Gm27029	ENSMUST00000107257	protein_coding	alternative2	11	-1	101424519	1898
ENSMUSG00000024130	protein_coding	Abca3	ENSMUST00000234109	retained_intron		17	1	24352070	1703
ENSMUSG00000053030	protein_coding	Spink2	ENSMUST00000065216	protein_coding	principal3	5	-1	77211471	631
ENSMUSG00000097239	protein_coding	Gm27029	ENSMUST00000107259	protein_coding	principal5	11	-1	101424796	1855
ENSMUSG00000017774	protein_coding	Myo1c	ENSMUST00000108431	protein_coding	alternative1	11	1	75655873	4718
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000111291	protein_coding		2	1	92185483	2701
ENSMUSG00000108986	lincRNA	Gm32061	ENSMUST00000207232	lincRNA		7	-1	62423245	3478
ENSMUSG00000047787	protein_coding	Flrt1	ENSMUST00000113383	protein_coding	principal1	19	-1	7105729	5872
ENSMUSG00000032182	protein_coding	Yipf2	ENSMUST00000034700	protein_coding	principal1	9	-1	21592828	2174
ENSMUSG00000027353	protein_coding	Mcm8	ENSMUST00000135685	processed_transcript		2	1	132816224	735
ENSMUSG00000024130	protein_coding	Abca3	ENSMUST00000149233	retained_intron		17	1	24352085	2320
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000111292	protein_coding	principal3	2	1	92184276	2461
ENSMUSG00000026705	protein_coding	Klhl20	ENSMUST00000111611	protein_coding	principal1	1	-1	161131511	4072
ENSMUSG00000053030	protein_coding	Spink2	ENSMUST00000121825	protein_coding	alternative2	5	-1	77211205	643
ENSMUSG00000026192	protein_coding	Atic	ENSMUST00000148077	retained_intron		1	1	71557179	2533
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000035121	protein_coding	principal2	9	1	102717668	4328
ENSMUSG00000020235	protein_coding	Fzr1	ENSMUST00000140901	protein_coding	principal1	10	-1	81378516	3057
ENSMUSG00000033585	protein_coding	Ndn	ENSMUST00000038775	protein_coding	principal1	7	1	62346569	3694
ENSMUSG00000118441	protein_coding	Btbd35f26	ENSMUST00000238765	protein_coding	principal1	X	1	31336401	1701
ENSMUSG00000024130	protein_coding	Abca3	ENSMUST00000148557	retained_intron		17	1	24352085	4577
ENSMUSG00000092228	unprocessed_pseudogene	Vmn1r-ps28	ENSMUST00000174767	unprocessed_pseudogene		6	1	89907677	942
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000111294	protein_coding	alternative2	2	1	92184106	3710
ENSMUSG00000081769	protein_coding	Gm12216	ENSMUST00000220191	protein_coding	principal5	11	-1	53850048	1073
ENSMUSG00000058427	protein_coding	Cxcl2	ENSMUST00000200681	protein_coding	alternative2	5	1	90903871	1859
ENSMUSG00000024130	protein_coding	Abca3	ENSMUST00000155889	processed_transcript		17	1	24352097	339
ENSMUSG00000086580	unprocessed_pseudogene	Gm15280	ENSMUST00000126961	unprocessed_pseudogene		X	-1	31347822	640
ENSMUSG00000024130	protein_coding	Abca3	ENSMUST00000136295	retained_intron		17	1	24352102	3139
ENSMUSG00000107034	processed_pseudogene	Gm19060	ENSMUST00000201959	processed_pseudogene		5	1	77227378	421
ENSMUSG00000058427	protein_coding	Cxcl2	ENSMUST00000202317	retained_intron		5	1	90903873	397
ENSMUSG00000086906	unprocessed_pseudogene	Gm15276	ENSMUST00000145953	unprocessed_pseudogene		X	1	31351400	498
ENSMUSG00000070527	protein_coding	Mkrn3	ENSMUST00000094340	protein_coding	principal1	7	-1	62420139	2547
ENSMUSG00000032182	protein_coding	Yipf2	ENSMUST00000180365	protein_coding	principal1	9	-1	21592810	2014
ENSMUSG00000024130	protein_coding	Abca3	ENSMUST00000117337	protein_coding	alternative2	17	1	24364482	5202
ENSMUSG00000058427	protein_coding	Cxcl2	ENSMUST00000200919	retained_intron		5	1	90903873	2066
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000142528	processed_transcript		2	1	92184268	518
ENSMUSG00000029287	protein_coding	Tgfbr3	ENSMUST00000138469	processed_transcript		5	-1	107192367	2849
ENSMUSG00000020235	protein_coding	Fzr1	ENSMUST00000020457	nonsense_mediated_decay		10	-1	81378451	1956
ENSMUSG00000024130	protein_coding	Abca3	ENSMUST00000079594	protein_coding	principal2	17	1	24352046	6380
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000142011	nonsense_mediated_decay		9	1	102717668	4427
ENSMUSG00000028684	protein_coding	Urod	ENSMUST00000030446	protein_coding	principal1	4	-1	116994413	1489
ENSMUSG00000026192	protein_coding	Atic	ENSMUST00000155769	retained_intron		1	1	71557179	1631
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000128781	protein_coding		2	1	92185459	727
ENSMUSG00000029287	protein_coding	Tgfbr3	ENSMUST00000136882	protein_coding		5	-1	107132923	687
ENSMUSG00000118465	protein_coding	Btbd35f19	ENSMUST00000238426	protein_coding	principal1	X	-1	31383886	1701
ENSMUSG00000026192	protein_coding	Atic	ENSMUST00000136443	retained_intron		1	1	71557213	2576
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000138995	protein_coding		2	1	92186465	684
ENSMUSG00000056972	protein_coding	Magel2	ENSMUST00000080403	protein_coding	principal1	7	1	62377010	4631
ENSMUSG00000026192	protein_coding	Atic	ENSMUST00000154855	retained_intron		1	1	71568866	434
ENSMUSG00000032182	protein_coding	Yipf2	ENSMUST00000213809	protein_coding		9	-1	21592816	1883
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000156485	protein_coding		9	1	102718429	414
ENSMUSG00000028684	protein_coding	Urod	ENSMUST00000134598	retained_intron		4	-1	116991665	539
ENSMUSG00000029287	protein_coding	Tgfbr3	ENSMUST00000146591	retained_intron		5	-1	107289595	1368
ENSMUSG00000031958	protein_coding	Ldhd	ENSMUST00000070004	protein_coding	principal1	8	-1	111630374	2273
ENSMUSG00000020235	protein_coding	Fzr1	ENSMUST00000138343	retained_intron		10	-1	81378463	2780
ENSMUSG00000031760	protein_coding	Mt3	ENSMUST00000034211	protein_coding	principal1	8	1	94152607	536
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000221481	protein_coding		13	1	43365496	1548
ENSMUSG00000026705	protein_coding	Klhl20	ENSMUST00000140905	retained_intron		1	-1	161131511	4817
ENSMUSG00000039275	protein_coding	Foxk2	ENSMUST00000106113	protein_coding	principal1	11	1	121259990	5029
ENSMUSG00000070526	protein_coding	Peg12	ENSMUST00000094339	protein_coding	principal1	7	-1	62464510	2640
ENSMUSG00000020235	protein_coding	Fzr1	ENSMUST00000118812	protein_coding		10	-1	81371413	1215
ENSMUSG00000092111	protein_coding	Vmn2r113	ENSMUST00000170322	protein_coding	principal2	17	1	22942984	9615
ENSMUSG00000079507	protein_coding	H2-Q1	ENSMUST00000172994	retained_intron		17	1	35320405	2860
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000145937	protein_coding		9	1	102718470	564
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000223194	protein_coding	principal1	13	1	43365506	1398
ENSMUSG00000058427	protein_coding	Cxcl2	ENSMUST00000075433	protein_coding	principal2	5	1	90903873	1109
ENSMUSG00000028684	protein_coding	Urod	ENSMUST00000150370	retained_intron		4	-1	116991886	598
ENSMUSG00000020235	protein_coding	Fzr1	ENSMUST00000150824	retained_intron		10	-1	81369541	870
ENSMUSG00000092111	protein_coding	Vmn2r113	ENSMUST00000234192	retained_intron		17	1	22942984	17381
ENSMUSG00000025792	protein_coding	Slc25a10	ENSMUST00000026899	protein_coding	principal1	11	1	120491840	2023
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000134483	protein_coding		9	1	102718485	329
ENSMUSG00000092111	protein_coding	Vmn2r113	ENSMUST00000234465	nonsense_mediated_decay		17	1	22942984	10210
ENSMUSG00000026705	protein_coding	Klhl20	ENSMUST00000117467	nonsense_mediated_decay		1	-1	161131428	3195
ENSMUSG00000020235	protein_coding	Fzr1	ENSMUST00000127203	processed_transcript		10	-1	81378380	369
ENSMUSG00000039275	protein_coding	Foxk2	ENSMUST00000153579	processed_transcript		11	1	121290744	452
ENSMUSG00000017774	protein_coding	Myo1c	ENSMUST00000151174	retained_intron		11	1	75656149	2503
ENSMUSG00000092111	protein_coding	Vmn2r113	ENSMUST00000234875	retained_intron		17	1	22942984	11442
ENSMUSG00000031760	protein_coding	Mt3	ENSMUST00000211930	protein_coding		8	1	94152746	477
ENSMUSG00000028684	protein_coding	Urod	ENSMUST00000135164	retained_intron		4	-1	116994364	1177
ENSMUSG00000092111	protein_coding	Vmn2r113	ENSMUST00000234787	protein_coding	alternative2	17	1	22942984	9462
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000190047	protein_coding		9	1	102718568	549
ENSMUSG00000112262	unprocessed_pseudogene	Gm48013	ENSMUST00000218579	unprocessed_pseudogene		12	1	95324907	413
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000220874	retained_intron		13	1	43365513	1577
ENSMUSG00000039275	protein_coding	Foxk2	ENSMUST00000151492	retained_intron		11	1	121298516	607
ENSMUSG00000026705	protein_coding	Klhl20	ENSMUST00000195584	nonsense_mediated_decay		1	-1	161095624	1601
ENSMUSG00000044248	protein_coding	Vmn1r45	ENSMUST00000054202	protein_coding	principal1	6	-1	89940598	3341
ENSMUSG00000031760	protein_coding	Mt3	ENSMUST00000211915	protein_coding		8	1	94152746	440
ENSMUSG00000026705	protein_coding	Klhl20	ENSMUST00000148952	retained_intron		1	-1	161131511	4182
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000130602	protein_coding		9	1	102720287	3475
ENSMUSG00000026705	protein_coding	Klhl20	ENSMUST00000192890	retained_intron		1	-1	161104356	4238
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000221955	retained_intron		13	1	43365530	803
ENSMUSG00000017774	protein_coding	Myo1c	ENSMUST00000136935	protein_coding		11	1	75656198	351
ENSMUSG00000044248	protein_coding	Vmn1r45	ENSMUST00000228662	protein_coding	principal1	6	-1	89940598	3309
ENSMUSG00000081769	protein_coding	Gm12216	ENSMUST00000117316	protein_coding	alternative2	11	-1	53859256	1152
ENSMUSG00000073437	processed_transcript	D330041H03Rik	ENSMUST00000181014	antisense		17	-1	24414429	1903
ENSMUSG00000094779	TR_V_gene	Trav13n-2	ENSMUST00000196941	TR_V_gene		14	1	53253792	331
ENSMUSG00000026705	protein_coding	Klhl20	ENSMUST00000145736	retained_intron		1	-1	161131442	2992
ENSMUSG00000044248	protein_coding	Vmn1r45	ENSMUST00000227426	protein_coding	principal1	6	-1	89940598	3205
ENSMUSG00000028684	protein_coding	Urod	ENSMUST00000130273	protein_coding		4	-1	116994357	459
ENSMUSG00000017774	protein_coding	Myo1c	ENSMUST00000148659	retained_intron		11	1	75661733	783
ENSMUSG00000018986	protein_coding	Slfn3	ENSMUST00000019130	protein_coding	principal2	11	1	83191330	1816
ENSMUSG00000094779	TR_V_gene	Trav13n-2	ENSMUST00000103622	TR_V_gene	principal1	14	1	53254047	264
ENSMUSG00000081769	protein_coding	Gm12216	ENSMUST00000126535	processed_transcript		11	-1	53859229	489
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000220458	protein_coding		13	1	43365628	435
ENSMUSG00000073437	processed_transcript	D330041H03Rik	ENSMUST00000181259	antisense		17	-1	24414513	1256
ENSMUSG00000115212	transcribed_unprocessed_pseudogene	Gm8417	ENSMUST00000227959	processed_transcript		14	1	49802785	1581
ENSMUSG00000044248	protein_coding	Vmn1r45	ENSMUST00000227977	protein_coding	principal1	6	-1	89940598	3297
ENSMUSG00000017774	protein_coding	Myo1c	ENSMUST00000123064	retained_intron		11	1	75665392	732
ENSMUSG00000036278	protein_coding	Macrod1	ENSMUST00000040261	protein_coding	principal1	19	1	7056810	1228
ENSMUSG00000115212	transcribed_unprocessed_pseudogene	Gm8417	ENSMUST00000228347	transcribed_unprocessed_pseudogene		14	1	49805849	1818
ENSMUSG00000081769	protein_coding	Gm12216	ENSMUST00000120776	protein_coding	alternative2	11	-1	53859256	826
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000155143	processed_transcript		9	1	102722316	605
ENSMUSG00000116298	TEC	4833412C15Rik	ENSMUST00000230697	TEC		15	-1	77115802	2071
ENSMUSG00000044248	protein_coding	Vmn1r45	ENSMUST00000226167	protein_coding		6	-1	89940598	2893
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000220645	nonsense_mediated_decay		13	1	43365638	621
ENSMUSG00000073437	processed_transcript	D330041H03Rik	ENSMUST00000181760	antisense		17	-1	24414407	1362
ENSMUSG00000018986	protein_coding	Slfn3	ENSMUST00000214041	protein_coding	alternative2	11	1	83191333	1966
ENSMUSG00000020234	protein_coding	4930404N11Rik	ENSMUST00000131736	protein_coding		10	-1	81364854	1335
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000220576	protein_coding		13	1	43365664	1579
ENSMUSG00000044248	protein_coding	Vmn1r45	ENSMUST00000227122	protein_coding		6	-1	89940598	2861
ENSMUSG00000081769	protein_coding	Gm12216	ENSMUST00000121435	protein_coding	alternative2	11	-1	53859256	655
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000138224	retained_intron		9	1	102722534	4332
ENSMUSG00000017774	protein_coding	Myo1c	ENSMUST00000146419	retained_intron		11	1	75668094	780
ENSMUSG00000018986	protein_coding	Slfn3	ENSMUST00000216599	processed_transcript		11	1	83208796	2834
ENSMUSG00000044248	protein_coding	Vmn1r45	ENSMUST00000227571	protein_coding		6	-1	89940598	2757
ENSMUSG00000097267	antisense	1700109K24Rik	ENSMUST00000227532	antisense		15	1	77084398	1030
ENSMUSG00000020234	protein_coding	4930404N11Rik	ENSMUST00000124512	retained_intron		10	-1	81364876	649
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000221515	protein_coding		13	1	43365686	1793
ENSMUSG00000043468	protein_coding	Adam30	ENSMUST00000198363	protein_coding		3	1	98160630	1042
ENSMUSG00000044248	protein_coding	Vmn1r45	ENSMUST00000228492	protein_coding		6	-1	89940598	2849
ENSMUSG00000082874	processed_pseudogene	Rpl15-ps1	ENSMUST00000120694	processed_pseudogene		11	1	21953140	564
ENSMUSG00000108164	processed_pseudogene	Gm43899	ENSMUST00000203675	processed_pseudogene		6	-1	58781937	246
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000126616	processed_transcript		9	1	102728331	541
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000044036	protein_coding		2	1	92093117	6187
ENSMUSG00000015533	protein_coding	Itga2	ENSMUST00000056117	protein_coding	principal1	13	-1	114932100	7108
ENSMUSG00000017774	protein_coding	Myo1c	ENSMUST00000155027	retained_intron		11	1	75670276	642
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000222106	protein_coding		13	1	43379673	2425
ENSMUSG00000097267	antisense	1700109K24Rik	ENSMUST00000181870	antisense		15	1	77084443	1045
ENSMUSG00000073437	processed_transcript	D330041H03Rik	ENSMUST00000180390	antisense		17	-1	24414542	411
ENSMUSG00000032531	protein_coding	Amotl2	ENSMUST00000136934	retained_intron		9	1	102730731	919
ENSMUSG00000048720	protein_coding	Tbc1d12	ENSMUST00000037302	protein_coding	principal1	19	1	38836579	4209
ENSMUSG00000038721	protein_coding	Hoxb7	ENSMUST00000049352	protein_coding	principal1	11	1	96286623	1291
ENSMUSG00000079507	protein_coding	H2-Q1	ENSMUST00000105041	protein_coding	alternative2	17	1	35320547	1954
ENSMUSG00000073437	processed_transcript	D330041H03Rik	ENSMUST00000180721	retained_intron		17	-1	24414427	1998
ENSMUSG00000043468	protein_coding	Adam30	ENSMUST00000050342	protein_coding	principal1	3	1	98160660	3510
ENSMUSG00000116185	TEC	Gm49411	ENSMUST00000230993	TEC		15	-1	77178264	2476
ENSMUSG00000015533	protein_coding	Itga2	ENSMUST00000224204	protein_coding		13	-1	114901943	480
ENSMUSG00000073437	processed_transcript	D330041H03Rik	ENSMUST00000180579	antisense		17	-1	24414399	605
ENSMUSG00000048720	protein_coding	Tbc1d12	ENSMUST00000235558	protein_coding		19	1	38836677	3401
ENSMUSG00000025967	protein_coding	Eef1b2	ENSMUST00000129339	protein_coding	principal1	1	1	63176825	1939
ENSMUSG00000073437	processed_transcript	D330041H03Rik	ENSMUST00000084725	processed_transcript		17	-1	24413624	285
ENSMUSG00000038721	protein_coding	Hoxb7	ENSMUST00000151596	processed_transcript		11	1	96288715	370
ENSMUSG00000114541	lincRNA	Gm29680	ENSMUST00000225610	lincRNA		13	-1	90217142	2823
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000236140	protein_coding	principal1	17	1	30626935	16685
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000068702	protein_coding	principal3	2	1	92093137	6023
ENSMUSG00000054021	protein_coding	Sirt5	ENSMUST00000066804	protein_coding	principal1	13	1	43370710	1367
ENSMUSG00000028684	protein_coding	Urod	ENSMUST00000123079	retained_intron		4	-1	116994346	912
ENSMUSG00000028684	protein_coding	Urod	ENSMUST00000127635	retained_intron		4	-1	116994345	511
ENSMUSG00000020234	protein_coding	4930404N11Rik	ENSMUST00000020456	protein_coding	principal1	10	-1	81365816	691
ENSMUSG00000079507	protein_coding	H2-Q1	ENSMUST00000073208	protein_coding	principal2	17	1	35320558	2024
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000090586	protein_coding		2	1	92221562	6310
ENSMUSG00000048933	protein_coding	Olfr722	ENSMUST00000213271	processed_transcript		14	-1	49901999	1085
ENSMUSG00000102756	TEC	Gm37054	ENSMUST00000193481	TEC		13	1	90238172	543
ENSMUSG00000028684	protein_coding	Urod	ENSMUST00000153629	processed_transcript		4	-1	116993597	162
ENSMUSG00000094752	unprocessed_pseudogene	Vmn2r-ps129	ENSMUST00000177509	unprocessed_pseudogene		17	1	22992706	2568
ENSMUSG00000028684	protein_coding	Urod	ENSMUST00000139209	retained_intron		4	-1	116994340	406
ENSMUSG00000114204	lincRNA	Gm47520	ENSMUST00000225049	lincRNA		13	-1	90418100	980
ENSMUSG00000037621	protein_coding	Atoh8	ENSMUST00000206425	nonsense_mediated_decay		6	-1	72234537	1467
ENSMUSG00000093433	unprocessed_pseudogene	Gm18415	ENSMUST00000177464	unprocessed_pseudogene		17	-1	23015033	647
ENSMUSG00000102793	TEC	Gm37708	ENSMUST00000192337	TEC		13	-1	90386557	895
ENSMUSG00000093564	unprocessed_pseudogene	Gm18396	ENSMUST00000177095	unprocessed_pseudogene		17	-1	23045858	361
ENSMUSG00000028684	protein_coding	Urod	ENSMUST00000139816	retained_intron		4	-1	116994380	351
ENSMUSG00000020234	protein_coding	4930404N11Rik	ENSMUST00000130762	retained_intron		10	-1	81365790	745
ENSMUSG00000004359	protein_coding	Spic	ENSMUST00000004473	protein_coding	principal1	10	-1	88683023	1763
ENSMUSG00000019920	protein_coding	Lims1	ENSMUST00000020078	protein_coding		10	1	58323466	4327
ENSMUSG00000089892	protein_coding	Olfr1199	ENSMUST00000131038	protein_coding	principal1	2	-1	88760004	2557
ENSMUSG00000048933	protein_coding	Olfr722	ENSMUST00000053290	protein_coding	principal1	14	-1	49901941	1582
ENSMUSG00000109468	TEC	Gm45185	ENSMUST00000207556	TEC		7	1	99141593	404
ENSMUSG00000089892	protein_coding	Olfr1199	ENSMUST00000213138	protein_coding	principal1	2	-1	88760004	2657
ENSMUSG00000019803	protein_coding	Nr2e1	ENSMUST00000019938	protein_coding	principal1	10	-1	42583632	3285
ENSMUSG00000025792	protein_coding	Slc25a10	ENSMUST00000144706	processed_transcript		11	1	120491888	1658
ENSMUSG00000025967	protein_coding	Eef1b2	ENSMUST00000142062	nonsense_mediated_decay		1	1	63177129	482
ENSMUSG00000004359	protein_coding	Spic	ENSMUST00000133724	nonsense_mediated_decay		10	-1	88683023	1356
ENSMUSG00000037621	protein_coding	Atoh8	ENSMUST00000042646	protein_coding	principal1	6	-1	72235577	2355
ENSMUSG00000019920	protein_coding	Lims1	ENSMUST00000238939	protein_coding	alternative1	10	1	58371454	4351
ENSMUSG00000089892	protein_coding	Olfr1199	ENSMUST00000124021	protein_coding	principal1	2	-1	88760469	2967
ENSMUSG00000025967	protein_coding	Eef1b2	ENSMUST00000188524	protein_coding		1	1	63177130	681
ENSMUSG00000025792	protein_coding	Slc25a10	ENSMUST00000127349	processed_transcript		11	1	120491909	920
ENSMUSG00000106388	unprocessed_pseudogene	Rhox7-ps2	ENSMUST00000197804	unprocessed_pseudogene		X	-1	37679555	322
ENSMUSG00000110597	transcribed_unprocessed_pseudogene	Gm8798	ENSMUST00000211877	transcribed_unprocessed_pseudogene		8	1	104886862	1661
ENSMUSG00000089892	protein_coding	Olfr1199	ENSMUST00000099813	protein_coding	principal1	2	-1	88756673	933
ENSMUSG00000095658	protein_coding	Vmn2r-ps130	ENSMUST00000175853	protein_coding	principal1	17	1	23061166	7708
ENSMUSG00000025792	protein_coding	Slc25a10	ENSMUST00000123373	processed_transcript		11	1	120491915	813
ENSMUSG00000019920	protein_coding	Lims1	ENSMUST00000020077	protein_coding	principal3	10	1	58394373	1565
ENSMUSG00000106486	processed_pseudogene	Gm9771	ENSMUST00000198267	processed_pseudogene		3	-1	98191102	1137
ENSMUSG00000110597	transcribed_unprocessed_pseudogene	Gm8798	ENSMUST00000213048	processed_transcript		8	1	104892746	2357
ENSMUSG00000019803	protein_coding	Nr2e1	ENSMUST00000105498	protein_coding		10	-1	42568828	780
ENSMUSG00000037621	protein_coding	Atoh8	ENSMUST00000206553	processed_transcript		6	-1	72235230	659
ENSMUSG00000081136	processed_pseudogene	Gm12990	ENSMUST00000120372	processed_pseudogene		4	-1	135403656	468
ENSMUSG00000025792	protein_coding	Slc25a10	ENSMUST00000138874	processed_transcript		11	1	120496099	654
ENSMUSG00000019920	protein_coding	Lims1	ENSMUST00000105468	protein_coding	alternative1	10	1	58394388	1205
ENSMUSG00000004359	protein_coding	Spic	ENSMUST00000138734	protein_coding		10	-1	88685015	646
ENSMUSG00000105459	TEC	4930449I04Rik	ENSMUST00000198191	TEC		5	1	45857642	1123
ENSMUSG00000091712	protein_coding	Sec14l5	ENSMUST00000230616	protein_coding	principal1	16	1	5147109	5740
ENSMUSG00000025967	protein_coding	Eef1b2	ENSMUST00000148553	processed_transcript		1	1	63177131	386
ENSMUSG00000094277	processed_pseudogene	Gm21726	ENSMUST00000179654	processed_pseudogene		13	1	90583329	392
ENSMUSG00000025792	protein_coding	Slc25a10	ENSMUST00000152187	processed_transcript		11	1	120497725	459
ENSMUSG00000019803	protein_coding	Nr2e1	ENSMUST00000126848	processed_transcript		10	-1	42580345	654
ENSMUSG00000019920	protein_coding	Lims1	ENSMUST00000124312	processed_transcript		10	1	58408057	485
ENSMUSG00000103069	TEC	Gm36966	ENSMUST00000192217	TEC		13	1	90634085	413
ENSMUSG00000081195	unprocessed_pseudogene	Rhox2-ps	ENSMUST00000117421	unprocessed_pseudogene		X	-1	37683431	322
ENSMUSG00000106602	lincRNA	4930405L22Rik	ENSMUST00000198088	lincRNA		5	-1	45932409	585
ENSMUSG00000019803	protein_coding	Nr2e1	ENSMUST00000143891	processed_transcript		10	-1	42580774	464
ENSMUSG00000086929	antisense	Gm11788	ENSMUST00000142520	antisense		11	-1	120492394	562
ENSMUSG00000004359	protein_coding	Spic	ENSMUST00000144338	retained_intron		10	-1	88683023	2290
ENSMUSG00000026729	lincRNA	4930562F07Rik	ENSMUST00000028061	lincRNA		1	-1	160077918	830
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000111290	protein_coding		2	1	92093137	6332
ENSMUSG00000091712	protein_coding	Sec14l5	ENSMUST00000165810	protein_coding	principal1	16	1	5147109	2337
ENSMUSG00000025967	protein_coding	Eef1b2	ENSMUST00000135877	nonsense_mediated_decay		1	1	63177145	691
ENSMUSG00000058318	protein_coding	Phf21a	ENSMUST00000111297	protein_coding		2	1	92093137	6188
ENSMUSG00000026729	lincRNA	4930562F07Rik	ENSMUST00000164249	lincRNA		1	-1	160077985	758
ENSMUSG00000019920	protein_coding	Lims1	ENSMUST00000148799	processed_transcript		10	1	58416643	515
ENSMUSG00000093825	protein_coding	Olfr723	ENSMUST00000206058	protein_coding	principal1	14	-1	49931787	1078
ENSMUSG00000041885	protein_coding	Olfr680-ps1	ENSMUST00000042676	protein_coding	principal1	7	-1	105092817	936
ENSMUSG00000100318	processed_pseudogene	Gm18799	ENSMUST00000189104	processed_pseudogene		1	-1	33316582	913
ENSMUSG00000025967	protein_coding	Eef1b2	ENSMUST00000027108	nonsense_mediated_decay		1	1	63177145	802
ENSMUSG00000085645	antisense	Hoxb5os	ENSMUST00000150698	antisense		11	-1	96306910	596
ENSMUSG00000026729	lincRNA	4930562F07Rik	ENSMUST00000169600	lincRNA		1	-1	160077942	606
ENSMUSG00000082053	processed_pseudogene	Gm11220	ENSMUST00000118844	processed_pseudogene		4	-1	66725544	475
ENSMUSG00000066748	protein_coding	Olfr145	ENSMUST00000086062	protein_coding	principal1	9	1	37896724	6796
ENSMUSG00000107218	lincRNA	Gm42530	ENSMUST00000202683	lincRNA		5	1	90922732	550
ENSMUSG00000093825	protein_coding	Olfr723	ENSMUST00000164157	protein_coding	principal1	14	-1	49929568	1006
ENSMUSG00000097368	antisense	Gm10390	ENSMUST00000180812	antisense		5	-1	120139261	3975
ENSMUSG00000085645	antisense	Hoxb5os	ENSMUST00000140952	antisense		11	-1	96305081	158
ENSMUSG00000090394	protein_coding	4930523C07Rik	ENSMUST00000191933	retained_intron		1	1	160044382	3447
ENSMUSG00000098659	lincRNA	1110015O18Rik	ENSMUST00000184429	lincRNA		3	1	4797558	469
ENSMUSG00000038700	protein_coding	Hoxb5	ENSMUST00000190470	retained_intron		11	1	96303336	2786
ENSMUSG00000066748	protein_coding	Olfr145	ENSMUST00000213688	protein_coding	principal1	9	1	37896724	6691
ENSMUSG00000025967	protein_coding	Eef1b2	ENSMUST00000126469	processed_transcript		1	1	63177147	815
ENSMUSG00000097368	antisense	Gm10390	ENSMUST00000181905	antisense		5	-1	120139263	4269
ENSMUSG00000025967	protein_coding	Eef1b2	ENSMUST00000174890	nonsense_mediated_decay		1	1	63177185	642
ENSMUSG00000087256	antisense	Gm15990	ENSMUST00000132223	antisense		10	1	86125827	3321
ENSMUSG00000029816	protein_coding	Gpnmb	ENSMUST00000205103	retained_intron		6	1	49036546	1832
ENSMUSG00000110680	processed_pseudogene	Gm6796	ENSMUST00000211919	processed_pseudogene		9	-1	37911394	243
ENSMUSG00000025967	protein_coding	Eef1b2	ENSMUST00000126795	nonsense_mediated_decay		1	1	63177223	802
ENSMUSG00000112493	antisense	4930486F22Rik	ENSMUST00000218077	antisense		10	1	86095859	559
ENSMUSG00000098659	lincRNA	1110015O18Rik	ENSMUST00000183944	lincRNA		3	1	4798708	1533
ENSMUSG00000098659	lincRNA	1110015O18Rik	ENSMUST00000183632	lincRNA		3	1	4799493	570
ENSMUSG00000084799	lincRNA	Ino80dos	ENSMUST00000186436	lincRNA		1	1	63113078	652
ENSMUSG00000066747	protein_coding	Olfr878	ENSMUST00000216723	nonsense_mediated_decay		9	1	37917840	3971
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000093355	protein_coding		11	-1	6065582	1973
ENSMUSG00000066747	protein_coding	Olfr878	ENSMUST00000214263	protein_coding	principal1	9	1	37917954	4003
ENSMUSG00000066747	protein_coding	Olfr878	ENSMUST00000214813	processed_transcript		9	1	37917960	2925
ENSMUSG00000110117	processed_pseudogene	Gm17990	ENSMUST00000211728	processed_pseudogene		7	1	105106030	553
ENSMUSG00000114882	TEC	Gm48581	ENSMUST00000225219	TEC		13	-1	47155008	2652
ENSMUSG00000084799	lincRNA	Ino80dos	ENSMUST00000186786	lincRNA		1	1	63114096	1236
ENSMUSG00000066747	protein_coding	Olfr878	ENSMUST00000212878	protein_coding	principal1	9	1	37918548	1064
ENSMUSG00000104141	processed_pseudogene	Gm6140	ENSMUST00000192494	processed_pseudogene		3	-1	4891231	966
ENSMUSG00000038700	protein_coding	Hoxb5	ENSMUST00000049272	protein_coding	principal1	11	1	96303512	1895
ENSMUSG00000066747	protein_coding	Olfr878	ENSMUST00000086061	protein_coding		9	1	37918548	1065
ENSMUSG00000109742	lincRNA	Gm45558	ENSMUST00000209384	lincRNA		7	-1	105110199	1895
ENSMUSG00000110675	unprocessed_pseudogene	Olfr879-ps1	ENSMUST00000212455	unprocessed_pseudogene		9	1	37941415	694
ENSMUSG00000090394	protein_coding	4930523C07Rik	ENSMUST00000168250	processed_transcript		1	1	160044384	698
ENSMUSG00000114961	antisense	A930002C04Rik	ENSMUST00000224519	antisense		13	-1	47148670	2505
ENSMUSG00000084799	lincRNA	Ino80dos	ENSMUST00000138611	lincRNA		1	1	63114471	1576
ENSMUSG00000110535	unprocessed_pseudogene	Olfr880-ps1	ENSMUST00000212344	unprocessed_pseudogene		9	1	37968355	229
ENSMUSG00000096922	lincRNA	Gm17308	ENSMUST00000181749	lincRNA		3	1	5090276	1997
ENSMUSG00000025078	protein_coding	Nhlrc2	ENSMUST00000071423	protein_coding	principal1	19	1	56548261	8591
ENSMUSG00000084799	lincRNA	Ino80dos	ENSMUST00000188602	lincRNA		1	1	63114740	678
ENSMUSG00000027876	protein_coding	Reg4	ENSMUST00000029469	protein_coding	principal1	3	1	98222156	1021
ENSMUSG00000024670	protein_coding	Cd6	ENSMUST00000080292	protein_coding	principal3	19	-1	10830058	3032
ENSMUSG00000025078	protein_coding	Nhlrc2	ENSMUST00000236979	nonsense_mediated_decay		19	1	56570797	564
ENSMUSG00000090394	protein_coding	4930523C07Rik	ENSMUST00000163892	protein_coding	principal1	1	1	160044384	5652
ENSMUSG00000000690	protein_coding	Hoxb6	ENSMUST00000173432	protein_coding	principal1	11	1	96292476	1964
ENSMUSG00000095248	protein_coding	Olfr681	ENSMUST00000216247	protein_coding	principal1	7	1	105116836	4729
ENSMUSG00000038930	protein_coding	Rccd1	ENSMUST00000130888	retained_intron		7	-1	80320097	3367
ENSMUSG00000095248	protein_coding	Olfr681	ENSMUST00000215517	protein_coding	principal1	7	1	105116893	4324
ENSMUSG00000095248	protein_coding	Olfr681	ENSMUST00000215564	protein_coding	principal1	7	1	105116894	4487
ENSMUSG00000095248	protein_coding	Olfr681	ENSMUST00000215180	processed_transcript		7	1	105116894	4382
ENSMUSG00000000690	protein_coding	Hoxb6	ENSMUST00000000704	protein_coding	principal1	11	1	96299171	1321
ENSMUSG00000090394	protein_coding	4930523C07Rik	ENSMUST00000060298	processed_transcript		1	1	160044405	1809
ENSMUSG00000095248	protein_coding	Olfr681	ENSMUST00000098157	protein_coding	principal1	7	1	105121459	948
ENSMUSG00000030629	protein_coding	Zfand6	ENSMUST00000209117	protein_coding	principal1	7	-1	84689957	2955
ENSMUSG00000021577	protein_coding	Sdha	ENSMUST00000022062	protein_coding	principal1	13	-1	74350280	2900
ENSMUSG00000093703	unprocessed_pseudogene	Gm18397	ENSMUST00000176704	unprocessed_pseudogene		17	-1	23086658	587
ENSMUSG00000090394	protein_coding	4930523C07Rik	ENSMUST00000165923	processed_transcript		1	1	160044447	587
ENSMUSG00000090394	protein_coding	4930523C07Rik	ENSMUST00000097513	protein_coding	principal1	1	1	160075162	300
ENSMUSG00000106797	processed_transcript	Gm42936	ENSMUST00000174019	processed_transcript		5	-1	36613739	652
ENSMUSG00000107168	TEC	Gm42507	ENSMUST00000201187	TEC		5	1	36618701	2555
ENSMUSG00000021577	protein_coding	Sdha	ENSMUST00000161434	retained_intron		13	-1	74324256	858
ENSMUSG00000118452	transcribed_processed_pseudogene	Gm21883	ENSMUST00000238612	processed_transcript		X	-1	31574469	622
ENSMUSG00000118452	transcribed_processed_pseudogene	Gm21883	ENSMUST00000238617	transcribed_processed_pseudogene		X	-1	31573456	333
ENSMUSG00000021577	protein_coding	Sdha	ENSMUST00000221594	protein_coding		13	-1	74350201	722
ENSMUSG00000021775	protein_coding	Nr1d2	ENSMUST00000090543	protein_coding	principal1	14	-1	18239127	4663
ENSMUSG00000021577	protein_coding	Sdha	ENSMUST00000160900	retained_intron		13	-1	74328471	239
ENSMUSG00000024670	protein_coding	Cd6	ENSMUST00000025572	retained_intron		19	-1	10798744	2173
ENSMUSG00000109068	processed_pseudogene	Gm45207	ENSMUST00000207469	processed_pseudogene		7	-1	49062581	145
ENSMUSG00000021775	protein_coding	Nr1d2	ENSMUST00000225491	protein_coding		14	-1	18239011	737
ENSMUSG00000109051	TEC	Gm44913	ENSMUST00000208060	TEC		7	1	49346094	2990
ENSMUSG00000013643	protein_coding	Lypd8	ENSMUST00000013787	protein_coding	principal1	11	1	58379043	1093
ENSMUSG00000096645	protein_coding	Spin2e	ENSMUST00000238728	protein_coding	principal1	X	-1	31619849	1043
ENSMUSG00000021577	protein_coding	Sdha	ENSMUST00000160667	processed_transcript		13	-1	74350202	521
ENSMUSG00000021775	protein_coding	Nr1d2	ENSMUST00000225308	retained_intron		14	-1	18212372	687
ENSMUSG00000096645	protein_coding	Spin2e	ENSMUST00000238411	protein_coding		X	-1	31619994	941
ENSMUSG00000021775	protein_coding	Nr1d2	ENSMUST00000143308	retained_intron		14	-1	18239031	1680
ENSMUSG00000096645	protein_coding	Spin2e	ENSMUST00000179716	protein_coding		X	-1	31618920	705
ENSMUSG00000081261	unprocessed_pseudogene	Gm15370	ENSMUST00000117158	unprocessed_pseudogene		1	1	88129581	253
ENSMUSG00000013643	protein_coding	Lypd8	ENSMUST00000108826	protein_coding	principal1	11	1	58379043	1219
ENSMUSG00000092220	processed_transcript	Gm20528	ENSMUST00000173165	processed_transcript		1	-1	88218584	534
ENSMUSG00000021577	protein_coding	Sdha	ENSMUST00000161086	retained_intron		13	-1	74339756	647
ENSMUSG00000092220	processed_transcript	Gm20528	ENSMUST00000174821	processed_transcript		1	-1	88218554	802
ENSMUSG00000081488	unprocessed_pseudogene	Gm15368	ENSMUST00000120438	unprocessed_pseudogene		1	1	88186662	858
ENSMUSG00000100770	processed_pseudogene	Gm28466	ENSMUST00000190678	processed_pseudogene		1	-1	118479591	659
ENSMUSG00000118431	protein_coding	Btbd35f25	ENSMUST00000238772	protein_coding	principal1	X	-1	31717209	1701
ENSMUSG00000021577	protein_coding	Sdha	ENSMUST00000160400	retained_intron		13	-1	74350239	438
ENSMUSG00000030629	protein_coding	Zfand6	ENSMUST00000069537	protein_coding	principal1	7	-1	84679351	1658
ENSMUSG00000021577	protein_coding	Sdha	ENSMUST00000162137	processed_transcript		13	-1	74350157	420
ENSMUSG00000067321	processed_pseudogene	Gm7931	ENSMUST00000121537	processed_pseudogene		5	1	46414344	271
ENSMUSG00000021577	protein_coding	Sdha	ENSMUST00000161456	processed_transcript		13	-1	74350235	198
ENSMUSG00000083277	unprocessed_pseudogene	Gm15376	ENSMUST00000122258	unprocessed_pseudogene		1	1	88191901	783
ENSMUSG00000091655	processed_pseudogene	Gm8741	ENSMUST00000174736	processed_pseudogene		17	1	35335909	384
ENSMUSG00000090004	processed_pseudogene	Gm16125	ENSMUST00000159003	processed_pseudogene		13	1	74340539	339
ENSMUSG00000020317	protein_coding	Theg	ENSMUST00000077433	protein_coding	alternative2	10	-1	79587136	1275
ENSMUSG00000095770	protein_coding	Gm21637	ENSMUST00000105124	protein_coding	principal1	X	1	31962044	778
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000139210	nonsense_mediated_decay		10	-1	95413109	4242
ENSMUSG00000107722	antisense	2900060B14Rik	ENSMUST00000203191	antisense		1	-1	118459267	616
ENSMUSG00000029249	protein_coding	Rest	ENSMUST00000080359	protein_coding	principal1	5	1	77265491	7004
ENSMUSG00000107722	antisense	2900060B14Rik	ENSMUST00000204125	antisense		1	-1	118458747	78
ENSMUSG00000030629	protein_coding	Zfand6	ENSMUST00000178385	protein_coding	principal1	7	-1	84679392	1538
ENSMUSG00000024670	protein_coding	Cd6	ENSMUST00000039043	protein_coding	alternative2	19	-1	10829964	2813
ENSMUSG00000020317	protein_coding	Theg	ENSMUST00000159782	retained_intron		10	-1	79580120	472
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000130784	retained_intron		10	-1	95392967	3285
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000128854	processed_transcript		10	-1	95412734	352
ENSMUSG00000029249	protein_coding	Rest	ENSMUST00000113449	protein_coding	principal1	5	1	77266196	6924
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000155148	processed_transcript		10	-1	95412994	893
ENSMUSG00000024670	protein_coding	Cd6	ENSMUST00000173613	retained_intron		19	-1	10792988	629
ENSMUSG00000048930	protein_coding	Tada3	ENSMUST00000032410	protein_coding	principal1	6	-1	113377883	2848
ENSMUSG00000067878	protein_coding	Map7d3	ENSMUST00000114766	protein_coding	principal1	X	-1	56822326	2891
ENSMUSG00000024670	protein_coding	Cd6	ENSMUST00000174176	protein_coding		19	-1	10829856	982
ENSMUSG00000045629	protein_coding	Sh3tc2	ENSMUST00000235860	protein_coding	alternative2	18	1	61953075	4974
ENSMUSG00000024670	protein_coding	Cd6	ENSMUST00000236355	retained_intron		19	-1	10829926	4683
ENSMUSG00000030629	protein_coding	Zfand6	ENSMUST00000209140	retained_intron		7	-1	84618698	1235
ENSMUSG00000023027	protein_coding	Atf1	ENSMUST00000023769	protein_coding	principal1	15	1	100227819	2365
ENSMUSG00000059602	protein_coding	Syn3	ENSMUST00000120638	protein_coding	principal1	10	-1	86498856	2360
ENSMUSG00000067878	protein_coding	Map7d3	ENSMUST00000135542	protein_coding		X	-1	56822314	1478
ENSMUSG00000030629	protein_coding	Zfand6	ENSMUST00000209165	protein_coding		7	-1	84689883	967
ENSMUSG00000045629	protein_coding	Sh3tc2	ENSMUST00000235652	nonsense_mediated_decay		18	1	61953084	4487
ENSMUSG00000020085	protein_coding	Aifm2	ENSMUST00000131361	retained_intron		10	1	61715287	656
ENSMUSG00000020317	protein_coding	Theg	ENSMUST00000020566	protein_coding	principal4	10	-1	79587331	1444
ENSMUSG00000023027	protein_coding	Atf1	ENSMUST00000163855	protein_coding		15	1	100227871	831
ENSMUSG00000045629	protein_coding	Sh3tc2	ENSMUST00000236759	protein_coding		18	1	61977959	3615
ENSMUSG00000020085	protein_coding	Aifm2	ENSMUST00000140664	retained_intron		10	1	61728148	477
ENSMUSG00000048930	protein_coding	Tada3	ENSMUST00000043333	protein_coding		6	-1	113377376	1708
ENSMUSG00000061653	protein_coding	Vmn1r46	ENSMUST00000205088	protein_coding	principal1	6	1	89969313	10770
ENSMUSG00000020085	protein_coding	Aifm2	ENSMUST00000129809	processed_transcript		10	1	61715332	378
ENSMUSG00000025255	protein_coding	Zfhx4	ENSMUST00000175866	protein_coding	alternative2	3	1	5218526	11287
ENSMUSG00000023027	protein_coding	Atf1	ENSMUST00000171869	protein_coding		15	1	100228263	550
ENSMUSG00000030629	protein_coding	Zfand6	ENSMUST00000207865	protein_coding		7	-1	84679367	792
ENSMUSG00000061653	protein_coding	Vmn1r46	ENSMUST00000226715	protein_coding	principal1	6	1	89969313	10861
ENSMUSG00000045629	protein_coding	Sh3tc2	ENSMUST00000051720	protein_coding	principal2	18	1	61953075	4536
ENSMUSG00000093801	TR_V_gene	Trav14n-2	ENSMUST00000197614	TR_V_gene		14	1	53259578	464
ENSMUSG00000030629	protein_coding	Zfand6	ENSMUST00000208782	protein_coding		7	-1	84679396	624
ENSMUSG00000061653	protein_coding	Vmn1r46	ENSMUST00000228231	retained_intron		6	1	89969313	13338
ENSMUSG00000048930	protein_coding	Tada3	ENSMUST00000099118	protein_coding		6	-1	113377517	1282
ENSMUSG00000023027	protein_coding	Atf1	ENSMUST00000165804	protein_coding		15	1	100232159	383
ENSMUSG00000093801	TR_V_gene	Trav14n-2	ENSMUST00000103623	TR_V_gene	principal1	14	1	53259900	276
ENSMUSG00000025255	protein_coding	Zfhx4	ENSMUST00000175641	retained_intron		3	1	5218546	2194
ENSMUSG00000061653	protein_coding	Vmn1r46	ENSMUST00000228401	protein_coding	principal1	6	1	89969313	10955
ENSMUSG00000025255	protein_coding	Zfhx4	ENSMUST00000176175	protein_coding		3	1	5221505	524
ENSMUSG00000048930	protein_coding	Tada3	ENSMUST00000125414	retained_intron		6	-1	113371142	655
ENSMUSG00000023027	protein_coding	Atf1	ENSMUST00000166809	retained_intron		15	1	100232171	426
ENSMUSG00000023027	protein_coding	Atf1	ENSMUST00000172154	protein_coding		15	1	100232198	604
ENSMUSG00000061653	protein_coding	Vmn1r46	ENSMUST00000075797	protein_coding	principal1	6	1	89976171	930
ENSMUSG00000086575	antisense	Gm14104	ENSMUST00000135990	antisense		2	-1	132847256	356
ENSMUSG00000048930	protein_coding	Tada3	ENSMUST00000113107	retained_intron		6	-1	113377739	1577
ENSMUSG00000061758	protein_coding	Akr1b10	ENSMUST00000038383	protein_coding	principal1	6	1	34384218	1371
ENSMUSG00000023027	protein_coding	Atf1	ENSMUST00000169408	nonsense_mediated_decay		15	1	100232733	705
ENSMUSG00000048930	protein_coding	Tada3	ENSMUST00000113106	retained_intron		6	-1	113377739	1850
ENSMUSG00000104915	TR_V_gene	Trav15n-2	ENSMUST00000199112	TR_V_gene	principal1	14	1	53267917	398
ENSMUSG00000030629	protein_coding	Zfand6	ENSMUST00000208519	retained_intron		7	-1	84679366	899
ENSMUSG00000048930	protein_coding	Tada3	ENSMUST00000193384	protein_coding		6	-1	113377756	440
ENSMUSG00000023027	protein_coding	Atf1	ENSMUST00000168103	nonsense_mediated_decay		15	1	100232751	861
ENSMUSG00000030629	protein_coding	Zfand6	ENSMUST00000208831	processed_transcript		7	-1	84634339	187
ENSMUSG00000059602	protein_coding	Syn3	ENSMUST00000145864	retained_intron		10	-1	86491897	4003
ENSMUSG00000030629	protein_coding	Zfand6	ENSMUST00000207975	protein_coding		7	-1	84689959	549
ENSMUSG00000023027	protein_coding	Atf1	ENSMUST00000166435	protein_coding		15	1	100254215	312
ENSMUSG00000059602	protein_coding	Syn3	ENSMUST00000123783	retained_intron		10	-1	86491897	4775
ENSMUSG00000082309	processed_pseudogene	Gm12123	ENSMUST00000120348	processed_pseudogene		11	-1	35323670	472
ENSMUSG00000059602	protein_coding	Syn3	ENSMUST00000139197	retained_intron		10	-1	86498896	1442
ENSMUSG00000061758	protein_coding	Akr1b10	ENSMUST00000144384	retained_intron		6	1	34384249	1131
ENSMUSG00000025255	protein_coding	Zfhx4	ENSMUST00000176383	protein_coding	principal2	3	1	5241672	13500
ENSMUSG00000004655	protein_coding	Aqp1	ENSMUST00000004774	protein_coding	principal1	6	1	55336432	2627
ENSMUSG00000085236	antisense	2610206C17Rik	ENSMUST00000129059	antisense		7	1	84689640	1717
ENSMUSG00000059602	protein_coding	Syn3	ENSMUST00000121789	protein_coding		10	-1	86498882	4006
ENSMUSG00000085236	antisense	2610206C17Rik	ENSMUST00000207313	antisense		7	1	84753127	262
ENSMUSG00000025255	protein_coding	Zfhx4	ENSMUST00000026284	protein_coding	principal2	3	1	5218554	13874
ENSMUSG00000085236	antisense	2610206C17Rik	ENSMUST00000168496	antisense		7	1	84775703	318
ENSMUSG00000061758	protein_coding	Akr1b10	ENSMUST00000115051	protein_coding		6	1	34384281	1022
ENSMUSG00000103881	TEC	Gm10748	ENSMUST00000194396	TEC		3	1	5212838	2379
ENSMUSG00000093812	lincRNA	Gm5627	ENSMUST00000178539	lincRNA		9	1	102739648	931
ENSMUSG00000103881	TEC	Gm10748	ENSMUST00000194070	TEC		3	1	5214763	333
ENSMUSG00000029594	protein_coding	Rbm19	ENSMUST00000031590	protein_coding	principal1	5	1	120116465	4010
ENSMUSG00000059602	protein_coding	Syn3	ENSMUST00000143319	processed_transcript		10	-1	86066843	566
ENSMUSG00000102204	TEC	Gm36958	ENSMUST00000192388	TEC		9	-1	102766509	1875
ENSMUSG00000038930	protein_coding	Rccd1	ENSMUST00000047362	protein_coding	principal1	7	-1	80324424	3336
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000020215	protein_coding	principal1	10	-1	95416857	2222
ENSMUSG00000110884	lincRNA	Gm47416	ENSMUST00000217446	lincRNA		9	1	102771495	1730
ENSMUSG00000046179	protein_coding	E2f8	ENSMUST00000058745	protein_coding	principal1	7	-1	48881041	3691
ENSMUSG00000111395	processed_pseudogene	Gm18655	ENSMUST00000214802	processed_pseudogene		9	-1	102820950	1090
ENSMUSG00000086224	antisense	2700069I18Rik	ENSMUST00000128815	antisense		3	-1	5220823	1020
ENSMUSG00000038930	protein_coding	Rccd1	ENSMUST00000121882	protein_coding	principal1	7	-1	80324444	2324
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000134918	processed_transcript		10	-1	95414827	874
ENSMUSG00000046179	protein_coding	E2f8	ENSMUST00000119223	protein_coding	principal1	7	-1	48881596	3499
ENSMUSG00000086224	antisense	2700069I18Rik	ENSMUST00000177440	antisense		3	-1	5220841	334
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000119917	protein_coding	principal1	10	-1	95415283	948
ENSMUSG00000052273	protein_coding	Dnah3	ENSMUST00000213149	nonsense_mediated_decay		7	-1	120090680	12289
ENSMUSG00000061758	protein_coding	Akr1b10	ENSMUST00000139156	nonsense_mediated_decay		6	1	34384281	1280
ENSMUSG00000038930	protein_coding	Rccd1	ENSMUST00000123109	retained_intron		7	-1	80324125	2237
ENSMUSG00000061758	protein_coding	Akr1b10	ENSMUST00000182055	retained_intron		6	1	34389599	969
ENSMUSG00000038473	protein_coding	Nos1ap	ENSMUST00000161221	processed_transcript		1	-1	170327654	627
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000135822	protein_coding		10	-1	95417180	497
ENSMUSG00000061758	protein_coding	Akr1b10	ENSMUST00000144072	retained_intron		6	1	34391431	857
ENSMUSG00000059768	polymorphic_pseudogene	Olfr682-ps1	ENSMUST00000071242	polymorphic_pseudogene		7	-1	105128435	934
ENSMUSG00000038930	protein_coding	Rccd1	ENSMUST00000148001	retained_intron		7	-1	80324454	2595
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000150432	protein_coding		10	-1	95415484	605
ENSMUSG00000059768	polymorphic_pseudogene	Olfr682-ps1	ENSMUST00000214399	protein_coding	principal1	7	-1	105128405	897
ENSMUSG00000038930	protein_coding	Rccd1	ENSMUST00000144685	retained_intron		7	-1	80319203	681
ENSMUSG00000046179	protein_coding	E2f8	ENSMUST00000151139	retained_intron		7	-1	48875251	598
ENSMUSG00000029594	protein_coding	Rbm19	ENSMUST00000202388	retained_intron		5	1	120116517	455
ENSMUSG00000038068	protein_coding	Rnf144b	ENSMUST00000068891	protein_coding	principal1	13	1	47122656	4640
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000129942	protein_coding		10	-1	95416212	623
ENSMUSG00000038930	protein_coding	Rccd1	ENSMUST00000123189	protein_coding		7	-1	80324120	638
ENSMUSG00000046179	protein_coding	E2f8	ENSMUST00000136142	retained_intron		7	-1	48881004	1913
ENSMUSG00000074093	protein_coding	Svip	ENSMUST00000098414	protein_coding	principal1	7	-1	52006018	3053
ENSMUSG00000029594	protein_coding	Rbm19	ENSMUST00000202777	nonsense_mediated_decay		5	1	120116520	3900
ENSMUSG00000102148	TEC	Gm38059	ENSMUST00000193746	TEC		7	1	49469712	1999
ENSMUSG00000038930	protein_coding	Rccd1	ENSMUST00000134288	retained_intron		7	-1	80324153	521
ENSMUSG00000103834	TEC	Gm37613	ENSMUST00000195677	TEC		7	1	49195541	3580
ENSMUSG00000030123	protein_coding	Plxnd1	ENSMUST00000015511	protein_coding	principal1	6	-1	115995005	6907
ENSMUSG00000029594	protein_coding	Rbm19	ENSMUST00000201527	retained_intron		5	1	120118596	600
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000128363	processed_transcript		10	-1	95416668	502
ENSMUSG00000038930	protein_coding	Rccd1	ENSMUST00000205863	retained_intron		7	-1	80324134	1516
ENSMUSG00000020044	protein_coding	Timp3	ENSMUST00000020234	protein_coding	principal1	10	1	86300372	4722
ENSMUSG00000038930	protein_coding	Rccd1	ENSMUST00000155124	processed_transcript		7	-1	80324401	246
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000145847	processed_transcript		10	-1	95415999	479
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000170690	protein_coding	principal1	10	-1	95416212	2195
ENSMUSG00000090175	protein_coding	Ugt1a9	ENSMUST00000073772	protein_coding	principal1	1	1	88070800	2190
ENSMUSG00000020027	protein_coding	Socs2	ENSMUST00000172070	protein_coding	principal1	10	-1	95415484	2153
ENSMUSG00000036309	protein_coding	Skp1a	ENSMUST00000147684	nonsense_mediated_decay		11	1	52231995	642
ENSMUSG00000020044	protein_coding	Timp3	ENSMUST00000151134	processed_transcript		10	1	86300554	3368
ENSMUSG00000114894	processed_pseudogene	Gm7084	ENSMUST00000224608	processed_pseudogene		14	1	18242422	832
ENSMUSG00000038068	protein_coding	Rnf144b	ENSMUST00000110111	protein_coding	principal1	13	1	47193825	3144
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184336	processed_transcript		7	1	48908716	483
ENSMUSG00000020044	protein_coding	Timp3	ENSMUST00000136045	processed_transcript		10	1	86300556	674
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000109813	protein_coding	principal2	11	-1	6065748	4023
ENSMUSG00000089675	protein_coding	Ugt1a8	ENSMUST00000113139	protein_coding	principal1	1	1	88087813	2227
ENSMUSG00000020044	protein_coding	Timp3	ENSMUST00000132307	protein_coding		10	1	86302854	352
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000183531	retained_intron		7	1	48959073	4144
ENSMUSG00000074093	protein_coding	Svip	ENSMUST00000209193	protein_coding		7	-1	52005698	487
ENSMUSG00000030123	protein_coding	Plxnd1	ENSMUST00000205003	retained_intron		6	-1	115956838	542
ENSMUSG00000081602	unprocessed_pseudogene	Gm15369	ENSMUST00000119681	unprocessed_pseudogene		1	1	88146376	394
ENSMUSG00000036045	processed_pseudogene	Gm12221	ENSMUST00000125096	processed_pseudogene		11	1	54158926	1131
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000101585	protein_coding		11	-1	6065538	1650
ENSMUSG00000040865	protein_coding	Ino80d	ENSMUST00000133236	nonsense_mediated_decay		1	-1	63091929	3625
ENSMUSG00000074093	protein_coding	Svip	ENSMUST00000207457	retained_intron		7	-1	52005848	514
ENSMUSG00000082677	unprocessed_pseudogene	Gm15371	ENSMUST00000117057	unprocessed_pseudogene		1	1	88153788	784
ENSMUSG00000030123	protein_coding	Plxnd1	ENSMUST00000123165	retained_intron		6	-1	115956364	417
ENSMUSG00000082513	unprocessed_pseudogene	Gm15374	ENSMUST00000119313	unprocessed_pseudogene		1	1	88151038	844
ENSMUSG00000118583	unprocessed_pseudogene	AC087801.2	ENSMUST00000239183	unprocessed_pseudogene		1	1	88061124	514
ENSMUSG00000060068	processed_pseudogene	Gm12222	ENSMUST00000121368	processed_pseudogene		11	1	54199433	260
ENSMUSG00000030123	protein_coding	Plxnd1	ENSMUST00000203628	retained_intron		6	-1	115960027	442
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000154197	processed_transcript		11	-1	6065538	851
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000129098	processed_transcript		11	-1	6065658	4125
ENSMUSG00000031924	protein_coding	Cyb5b	ENSMUST00000034400	protein_coding	principal1	8	1	107150640	4316
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000123391	processed_transcript		11	-1	6066362	456
ENSMUSG00000030123	protein_coding	Plxnd1	ENSMUST00000131590	protein_coding		6	-1	115969426	700
ENSMUSG00000086209	lincRNA	4933405E24Rik	ENSMUST00000131019	lincRNA		11	-1	54213285	1078
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000002817	protein_coding	alternative1	11	-1	6065742	1872
ENSMUSG00000057230	protein_coding	Aak1	ENSMUST00000089519	protein_coding	alternative2	6	1	86849517	19341
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000019133	protein_coding		11	-1	6065612	2223
ENSMUSG00000052273	protein_coding	Dnah3	ENSMUST00000209154	protein_coding	principal5	7	-1	120095177	12265
ENSMUSG00000031924	protein_coding	Cyb5b	ENSMUST00000212920	processed_transcript		8	1	107165915	2659
ENSMUSG00000084984	antisense	Far1os	ENSMUST00000156875	antisense		7	-1	113556350	480
ENSMUSG00000052273	protein_coding	Dnah3	ENSMUST00000208701	protein_coding		7	-1	119952157	3247
ENSMUSG00000029417	protein_coding	Cxcl9	ENSMUST00000113093	protein_coding	principal1	5	-1	92328079	2889
ENSMUSG00000057230	protein_coding	Aak1	ENSMUST00000204414	protein_coding		6	1	86849532	706
ENSMUSG00000084984	antisense	Far1os	ENSMUST00000138253	antisense		7	-1	113564987	893
ENSMUSG00000052273	protein_coding	Dnah3	ENSMUST00000208910	protein_coding		7	-1	119967842	2205
ENSMUSG00000029816	protein_coding	Gpnmb	ENSMUST00000031840	protein_coding	principal2	6	1	49036615	3701
ENSMUSG00000052273	protein_coding	Dnah3	ENSMUST00000213993	retained_intron		7	-1	120095280	1113
ENSMUSG00000029417	protein_coding	Cxcl9	ENSMUST00000202404	retained_intron		5	-1	92328078	370
ENSMUSG00000040865	protein_coding	Ino80d	ENSMUST00000097718	protein_coding		1	-1	63114667	13675
ENSMUSG00000052273	protein_coding	Dnah3	ENSMUST00000046993	protein_coding	alternative2	7	-1	120095177	12252
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000109812	protein_coding		11	-1	6065563	1875
ENSMUSG00000040865	protein_coding	Ino80d	ENSMUST00000188100	retained_intron		1	-1	63063561	3427
ENSMUSG00000029816	protein_coding	Gpnmb	ENSMUST00000203757	nonsense_mediated_decay		6	1	49036665	365
ENSMUSG00000032185	protein_coding	Carm1	ENSMUST00000034703	protein_coding	principal3	9	1	21546894	3220
ENSMUSG00000031762	protein_coding	Mt2	ENSMUST00000034214	protein_coding	principal1	8	1	94172664	511
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000101586	protein_coding	alternative1	11	-1	6065570	1590
ENSMUSG00000029816	protein_coding	Gpnmb	ENSMUST00000204260	protein_coding	alternative2	6	1	49036677	2430
ENSMUSG00000029594	protein_coding	Rbm19	ENSMUST00000200841	processed_transcript		5	1	120156811	1396
ENSMUSG00000029816	protein_coding	Gpnmb	ENSMUST00000204460	retained_intron		6	1	49047424	645
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000130427	processed_transcript		11	-1	6000448	412
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000155755	processed_transcript		11	-1	5984138	3328
ENSMUSG00000057230	protein_coding	Aak1	ENSMUST00000113668	retained_intron		6	1	86849628	1639
ENSMUSG00000029594	protein_coding	Rbm19	ENSMUST00000201105	processed_transcript		5	1	120162694	635
ENSMUSG00000036309	protein_coding	Skp1a	ENSMUST00000037324	protein_coding	principal1	11	1	52232009	1440
ENSMUSG00000056427	protein_coding	Slit3	ENSMUST00000069837	protein_coding	principal1	11	1	35121224	5228
ENSMUSG00000031762	protein_coding	Mt2	ENSMUST00000212806	protein_coding		8	1	94172860	388
ENSMUSG00000024767	protein_coding	Otub1	ENSMUST00000025679	protein_coding	principal1	19	-1	7206316	1713
ENSMUSG00000029594	protein_coding	Rbm19	ENSMUST00000202213	processed_transcript		5	1	120168337	485
ENSMUSG00000040865	protein_coding	Ino80d	ENSMUST00000137511	protein_coding		1	-1	63114334	1979
ENSMUSG00000032185	protein_coding	Carm1	ENSMUST00000115395	protein_coding	alternative2	9	1	21546913	3152
ENSMUSG00000110588	antisense	Gm45774	ENSMUST00000211992	antisense		8	-1	94173412	2665
ENSMUSG00000049037	protein_coding	Clec4a1	ENSMUST00000060484	protein_coding	principal1	6	1	122921848	1558
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000090443	protein_coding		11	-1	6065748	4004
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000186465	protein_coding	principal1	1	-1	84840516	9590
ENSMUSG00000029594	protein_coding	Rbm19	ENSMUST00000201075	processed_transcript		5	1	120169931	1933
ENSMUSG00000056427	protein_coding	Slit3	ENSMUST00000156571	processed_transcript		11	1	35171629	459
ENSMUSG00000040865	protein_coding	Ino80d	ENSMUST00000153992	protein_coding		1	-1	63114255	1795
ENSMUSG00000036309	protein_coding	Skp1a	ENSMUST00000093121	retained_intron		11	1	52232037	353
ENSMUSG00000029594	protein_coding	Rbm19	ENSMUST00000201792	processed_transcript		5	1	120173100	391
ENSMUSG00000036309	protein_coding	Skp1a	ENSMUST00000166537	protein_coding		11	1	52232037	370
ENSMUSG00000024767	protein_coding	Otub1	ENSMUST00000123594	protein_coding		19	-1	7206234	1728
ENSMUSG00000036309	protein_coding	Skp1a	ENSMUST00000109072	protein_coding	principal1	11	1	52232189	1754
ENSMUSG00000056427	protein_coding	Slit3	ENSMUST00000153098	processed_transcript		11	1	35177783	512
ENSMUSG00000029594	protein_coding	Rbm19	ENSMUST00000202788	processed_transcript		5	1	120175725	360
ENSMUSG00000024767	protein_coding	Otub1	ENSMUST00000127241	retained_intron		19	-1	7200464	634
ENSMUSG00000057230	protein_coding	Aak1	ENSMUST00000003710	protein_coding	principal3	6	1	86850053	7203
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000189670	protein_coding		1	-1	84749277	2847
ENSMUSG00000057897	protein_coding	Camk2b	ENSMUST00000109815	protein_coding	principal2	11	-1	6065563	3780
ENSMUSG00000024767	protein_coding	Otub1	ENSMUST00000142085	protein_coding		19	-1	7205775	446
ENSMUSG00000039005	protein_coding	Tlr4	ENSMUST00000048096	protein_coding	principal1	4	1	66827584	4077
ENSMUSG00000056427	protein_coding	Slit3	ENSMUST00000124438	processed_transcript		11	1	35544685	1218
ENSMUSG00000036309	protein_coding	Skp1a	ENSMUST00000116595	nonsense_mediated_decay		11	1	52236864	667
ENSMUSG00000024767	protein_coding	Otub1	ENSMUST00000123743	retained_intron		19	-1	7204419	450
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000186648	protein_coding		1	-1	84839288	6442
ENSMUSG00000057230	protein_coding	Aak1	ENSMUST00000156885	processed_transcript		6	1	86851185	328
ENSMUSG00000086311	sense_intronic	Gm12122	ENSMUST00000124503	sense_intronic		11	1	35350069	454
ENSMUSG00000039005	protein_coding	Tlr4	ENSMUST00000143580	processed_transcript		4	1	66827619	504
ENSMUSG00000082242	processed_pseudogene	Gm12443	ENSMUST00000122308	processed_pseudogene		4	-1	46420302	323
ENSMUSG00000038473	protein_coding	Nos1ap	ENSMUST00000160456	protein_coding	principal1	1	-1	170589861	3022
ENSMUSG00000057230	protein_coding	Aak1	ENSMUST00000204613	protein_coding		6	1	86959113	711
ENSMUSG00000100805	lincRNA	Gm29108	ENSMUST00000186020	lincRNA		Y	1	74408375	1498
ENSMUSG00000039005	protein_coding	Tlr4	ENSMUST00000147008	processed_transcript		4	1	66828202	646
ENSMUSG00000086920	antisense	Gm12207	ENSMUST00000143016	antisense		11	1	52233724	494
ENSMUSG00000107877	protein_coding	Gm43951	ENSMUST00000204457	protein_coding		11	-1	72207026	7987
ENSMUSG00000040865	protein_coding	Ino80d	ENSMUST00000165066	protein_coding	principal1	1	-1	63114267	13529
ENSMUSG00000039005	protein_coding	Tlr4	ENSMUST00000107365	protein_coding		4	1	66827613	1866
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000187733	nonsense_mediated_decay		1	-1	84731703	865
ENSMUSG00000100805	lincRNA	Gm29108	ENSMUST00000187930	lincRNA		Y	1	74408827	438
ENSMUSG00000057230	protein_coding	Aak1	ENSMUST00000204139	protein_coding		6	1	86964176	2192
ENSMUSG00000040865	protein_coding	Ino80d	ENSMUST00000172416	protein_coding		1	-1	63114267	13438
ENSMUSG00000113953	processed_pseudogene	Gm48201	ENSMUST00000221337	processed_pseudogene		12	-1	12949535	247
ENSMUSG00000038473	protein_coding	Nos1ap	ENSMUST00000162709	retained_intron		1	-1	170320780	1751
ENSMUSG00000118370	lincRNA	Gm41750	ENSMUST00000236502	lincRNA		18	1	62142618	295
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000191187	retained_intron		1	-1	84728876	859
ENSMUSG00000057230	protein_coding	Aak1	ENSMUST00000203647	retained_intron		6	1	86985271	2768
ENSMUSG00000113220	lincRNA	Gm35208	ENSMUST00000221590	lincRNA		12	1	12987317	1411
ENSMUSG00000089943	protein_coding	Ugt1a5	ENSMUST00000097659	protein_coding	principal1	1	1	88166012	2203
ENSMUSG00000038473	protein_coding	Nos1ap	ENSMUST00000162090	processed_transcript		1	-1	170324355	781
ENSMUSG00000057230	protein_coding	Aak1	ENSMUST00000204793	processed_transcript		6	1	86995010	890
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000197567	protein_coding		3	-1	148954658	5585
ENSMUSG00000090074	processed_pseudogene	Gm6921	ENSMUST00000161478	processed_pseudogene		8	1	127561435	435
ENSMUSG00000113928	lincRNA	Gm48209	ENSMUST00000220969	lincRNA		12	-1	13054729	1375
ENSMUSG00000045730	protein_coding	Adrb2	ENSMUST00000053640	protein_coding	principal1	18	-1	62179959	2144
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000185720	retained_intron		1	-1	84731774	2242
ENSMUSG00000102942	IG_V_pseudogene	Ighv1-33	ENSMUST00000193220	IG_V_pseudogene		12	-1	114844083	350
ENSMUSG00000108152	TEC	Gm44152	ENSMUST00000205007	TEC		6	1	86873786	1691
ENSMUSG00000112988	lincRNA	Gm35298	ENSMUST00000222719	lincRNA		12	1	13102845	430
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000189841	nonsense_mediated_decay		1	-1	84754404	524
ENSMUSG00000084195	unprocessed_pseudogene	Gm15372	ENSMUST00000120729	unprocessed_pseudogene		1	1	88126776	834
ENSMUSG00000084195	unprocessed_pseudogene	Gm15372	ENSMUST00000239178	unprocessed_pseudogene		1	1	88126776	834
ENSMUSG00000107688	sense_intronic	Gm44091	ENSMUST00000205212	sense_intronic		6	1	86976529	649
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000190125	retained_intron		1	-1	84750543	378
ENSMUSG00000024422	protein_coding	Dhx16	ENSMUST00000025292	protein_coding	principal1	17	1	35879819	3351
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000193174	protein_coding	alternative2	10	1	73821867	5936
ENSMUSG00000067299	protein_coding	Crygd	ENSMUST00000045028	protein_coding	principal1	1	-1	65063452	613
ENSMUSG00000054589	lincRNA	Gm9949	ENSMUST00000067743	lincRNA		18	1	62180126	962
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000105426	protein_coding	alternative2	10	1	73821883	6802
ENSMUSG00000108216	TEC	Gm44153	ENSMUST00000204162	TEC		6	1	86862873	1580
ENSMUSG00000067299	protein_coding	Crygd	ENSMUST00000146122	protein_coding		1	-1	65063301	330
ENSMUSG00000048787	protein_coding	Dcun1d3	ENSMUST00000059851	protein_coding	principal1	7	-1	119895745	5985
ENSMUSG00000107576	TEC	Gm44093	ENSMUST00000204381	TEC		6	1	86961641	1802
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000185909	nonsense_mediated_decay		1	-1	84839311	1641
ENSMUSG00000118012	lincRNA	Gm46620	ENSMUST00000236930	lincRNA		18	1	82694287	1875
ENSMUSG00000067299	protein_coding	Crygd	ENSMUST00000127762	retained_intron		1	-1	65063452	630
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000196526	protein_coding		3	-1	148990555	5615
ENSMUSG00000048787	protein_coding	Dcun1d3	ENSMUST00000207233	protein_coding	principal1	7	-1	119896125	2917
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000186894	protein_coding		1	-1	84839304	3073
ENSMUSG00000117824	lincRNA	Gm50350	ENSMUST00000236517	lincRNA		18	1	82702432	1385
ENSMUSG00000020085	protein_coding	Aifm2	ENSMUST00000105455	protein_coding	principal1	10	1	61715263	1512
ENSMUSG00000032185	protein_coding	Carm1	ENSMUST00000154049	retained_intron		9	1	21546923	3585
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000200543	protein_coding		3	-1	148990555	5509
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000185567	retained_intron		1	-1	84760184	2513
ENSMUSG00000101528	protein_coding	Gm29110	ENSMUST00000189924	protein_coding	principal1	Y	1	74470531	922
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000200154	protein_coding		3	-1	148990555	5412
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000185672	retained_intron		1	-1	84766715	682
ENSMUSG00000032185	protein_coding	Carm1	ENSMUST00000115394	protein_coding	alternative2	9	1	21546923	3320
ENSMUSG00000113284	lincRNA	Gm48213	ENSMUST00000222856	lincRNA		12	1	13125776	910
ENSMUSG00000048787	protein_coding	Dcun1d3	ENSMUST00000098080	protein_coding	principal1	7	-1	119895543	3072
ENSMUSG00000117888	lincRNA	Gm50351	ENSMUST00000235424	lincRNA		18	1	82717968	686
ENSMUSG00000117888	lincRNA	Gm50351	ENSMUST00000235835	lincRNA		18	1	82717979	659
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000190464	protein_coding		1	-1	84793551	640
ENSMUSG00000117888	lincRNA	Gm50351	ENSMUST00000238161	lincRNA		18	1	82718003	665
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000199750	protein_coding		3	-1	148954774	4399
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000190474	retained_intron		1	-1	84784298	1938
ENSMUSG00000048787	protein_coding	Dcun1d3	ENSMUST00000106519	protein_coding	principal1	7	-1	119896291	1475
ENSMUSG00000020085	protein_coding	Aifm2	ENSMUST00000067857	protein_coding	principal1	10	1	61715311	1442
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000189496	protein_coding		1	-1	84839301	1392
ENSMUSG00000117842	lincRNA	Gm41793	ENSMUST00000236295	lincRNA		18	-1	82726179	853
ENSMUSG00000048787	protein_coding	Dcun1d3	ENSMUST00000142120	protein_coding		7	-1	119861832	630
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000190067	protein_coding		1	-1	84840266	521
ENSMUSG00000117849	processed_pseudogene	Gm50355	ENSMUST00000237986	processed_pseudogene		18	-1	82729981	203
ENSMUSG00000032185	protein_coding	Carm1	ENSMUST00000130032	nonsense_mediated_decay		9	1	21546978	3336
ENSMUSG00000107877	protein_coding	Gm43951	ENSMUST00000108506	protein_coding	principal1	11	-1	72203371	4332
ENSMUSG00000048787	protein_coding	Dcun1d3	ENSMUST00000137888	protein_coding		7	-1	119861804	353
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000187818	protein_coding		1	-1	84838731	365
ENSMUSG00000071867	processed_pseudogene	Mrpl27-ps	ENSMUST00000096579	processed_pseudogene		18	1	15011246	447
ENSMUSG00000118085	lincRNA	Gm50356	ENSMUST00000236831	lincRNA		18	1	82758718	1405
ENSMUSG00000032185	protein_coding	Carm1	ENSMUST00000147749	processed_transcript		9	1	21547158	604
ENSMUSG00000048787	protein_coding	Dcun1d3	ENSMUST00000207488	retained_intron		7	-1	119896298	1955
ENSMUSG00000026219	protein_coding	Trip12	ENSMUST00000027421	protein_coding	principal1	1	-1	84839304	9632
ENSMUSG00000024422	protein_coding	Dhx16	ENSMUST00000174366	nonsense_mediated_decay		17	1	35879825	3275
ENSMUSG00000032185	protein_coding	Carm1	ENSMUST00000139871	processed_transcript		9	1	21575104	557
ENSMUSG00000060862	protein_coding	Zbtb40	ENSMUST00000049583	protein_coding	principal1	4	-1	137048695	7192
ENSMUSG00000020807	protein_coding	4933427D14Rik	ENSMUST00000151411	processed_transcript		11	-1	72155303	265
ENSMUSG00000018916	protein_coding	Csf2	ENSMUST00000019060	protein_coding	principal1	11	-1	54249667	800
ENSMUSG00000032185	protein_coding	Carm1	ENSMUST00000132011	processed_transcript		9	1	21587218	485
ENSMUSG00000104503	TEC	Gm37738	ENSMUST00000192396	TEC		1	-1	84824683	4716
ENSMUSG00000117450	antisense	4933424G05Rik	ENSMUST00000234445	antisense		18	1	14988995	1745
ENSMUSG00000020085	protein_coding	Aifm2	ENSMUST00000099706	protein_coding	principal1	10	1	61715323	3086
ENSMUSG00000101773	lincRNA	2210420H20Rik	ENSMUST00000188435	lincRNA		18	-1	82759041	629
ENSMUSG00000032185	protein_coding	Carm1	ENSMUST00000216160	protein_coding		9	1	21587345	665
ENSMUSG00000024422	protein_coding	Dhx16	ENSMUST00000172730	retained_intron		17	1	35887679	825
ENSMUSG00000024422	protein_coding	Dhx16	ENSMUST00000174449	retained_intron		17	1	35887936	566
ENSMUSG00000097738	lincRNA	4930445N18Rik	ENSMUST00000235556	lincRNA		18	1	82855894	1126
ENSMUSG00000032185	protein_coding	Carm1	ENSMUST00000130100	processed_transcript		9	1	21587403	598
ENSMUSG00000085585	antisense	Gm12223	ENSMUST00000135468	antisense		11	1	54247600	528
ENSMUSG00000024422	protein_coding	Dhx16	ENSMUST00000174330	retained_intron		17	1	35887942	562
ENSMUSG00000097738	lincRNA	4930445N18Rik	ENSMUST00000181345	lincRNA		18	1	82855894	1033
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000199059	protein_coding		3	-1	148954787	4637
ENSMUSG00000024422	protein_coding	Dhx16	ENSMUST00000173596	retained_intron		17	1	35888026	462
ENSMUSG00000028600	protein_coding	Podn	ENSMUST00000106709	protein_coding	principal1	4	-1	108032090	3170
ENSMUSG00000097738	lincRNA	4930445N18Rik	ENSMUST00000180631	lincRNA		18	1	82855897	886
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000198779	protein_coding		3	-1	148954787	4592
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000195988	protein_coding		3	-1	148954787	4541
ENSMUSG00000027086	protein_coding	Fastkd1	ENSMUST00000073152	protein_coding	principal2	2	-1	69712606	2865
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000199238	protein_coding	principal1	3	-1	148954787	4670
ENSMUSG00000024422	protein_coding	Dhx16	ENSMUST00000173967	protein_coding		17	1	35889281	490
ENSMUSG00000020085	protein_coding	Aifm2	ENSMUST00000080099	protein_coding		10	1	61720649	1329
ENSMUSG00000028600	protein_coding	Podn	ENSMUST00000146851	protein_coding		4	-1	108024315	1252
ENSMUSG00000024422	protein_coding	Dhx16	ENSMUST00000174308	retained_intron		17	1	35890733	491
ENSMUSG00000040363	protein_coding	Bcor	ENSMUST00000115513	protein_coding	alternative2	X	-1	12080553	6941
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000197348	protein_coding		3	-1	148833928	843
ENSMUSG00000027086	protein_coding	Fastkd1	ENSMUST00000102706	protein_coding	alternative2	2	-1	69712461	2511
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000197925	protein_coding		3	-1	148835391	793
ENSMUSG00000040363	protein_coding	Bcor	ENSMUST00000115512	protein_coding	alternative2	X	-1	12080553	6887
ENSMUSG00000096254	protein_coding	Olfr724	ENSMUST00000213390	protein_coding	principal1	14	-1	49963274	1152
ENSMUSG00000060862	protein_coding	Zbtb40	ENSMUST00000218160	protein_coding		4	-1	136991662	806
ENSMUSG00000028600	protein_coding	Podn	ENSMUST00000106708	protein_coding	principal1	4	-1	108031953	2947
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000200456	protein_coding		3	-1	148826396	610
ENSMUSG00000027086	protein_coding	Fastkd1	ENSMUST00000140776	retained_intron		2	-1	69713498	2414
ENSMUSG00000060862	protein_coding	Zbtb40	ENSMUST00000145505	retained_intron		4	-1	137048801	4446
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000200023	retained_intron		3	-1	148825174	4855
ENSMUSG00000096254	protein_coding	Olfr724	ENSMUST00000075030	protein_coding	principal1	14	-1	49961096	1006
ENSMUSG00000027086	protein_coding	Fastkd1	ENSMUST00000129260	retained_intron		2	-1	69713516	3200
ENSMUSG00000111919	processed_pseudogene	Gm46192	ENSMUST00000217894	processed_pseudogene		10	1	88704595	326
ENSMUSG00000112467	processed_pseudogene	Gm48144	ENSMUST00000219363	processed_pseudogene		10	-1	88716094	445
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000197521	retained_intron		3	-1	148835525	795
ENSMUSG00000089960	protein_coding	Ugt1a1	ENSMUST00000073049	protein_coding	principal1	1	1	88211959	2224
ENSMUSG00000104842	processed_pseudogene	Gm42821	ENSMUST00000199771	processed_pseudogene		3	1	98248599	489
ENSMUSG00000109918	unprocessed_pseudogene	Gm45374	ENSMUST00000211388	unprocessed_pseudogene		7	-1	105145547	136
ENSMUSG00000031481	protein_coding	Tpte	ENSMUST00000211497	nonsense_mediated_decay		8	1	22283441	2635
ENSMUSG00000028600	protein_coding	Podn	ENSMUST00000145491	processed_transcript		4	-1	108031954	3636
ENSMUSG00000115556	processed_pseudogene	Gm49133	ENSMUST00000227648	processed_pseudogene		14	1	49984923	352
ENSMUSG00000104466	TEC	Gm10513	ENSMUST00000194203	TEC		17	-1	11732345	6468
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000098518	retained_intron		3	-1	148989316	2585
ENSMUSG00000028600	protein_coding	Podn	ENSMUST00000130026	protein_coding		4	-1	108021526	626
ENSMUSG00000044120	protein_coding	Olfr683	ENSMUST00000209879	protein_coding	alternative2	7	-1	105147012	3841
ENSMUSG00000104527	TEC	Gm37332	ENSMUST00000195853	TEC		17	-1	11286765	2844
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000198563	retained_intron		3	-1	148989482	1669
ENSMUSG00000028600	protein_coding	Podn	ENSMUST00000147597	processed_transcript		4	-1	108030986	751
ENSMUSG00000044120	protein_coding	Olfr683	ENSMUST00000061284	protein_coding	principal2	7	-1	105144309	960
ENSMUSG00000028600	protein_coding	Podn	ENSMUST00000124265	processed_transcript		4	-1	108032337	358
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000168352	protein_coding		3	-1	148822979	2151
ENSMUSG00000100269	antisense	Gm28782	ENSMUST00000185980	antisense		1	1	43056267	414
ENSMUSG00000028600	protein_coding	Podn	ENSMUST00000044248	protein_coding	principal1	4	-1	108096445	2885
ENSMUSG00000029228	protein_coding	Lnx1	ENSMUST00000039744	protein_coding		5	-1	74677873	2727
ENSMUSG00000028184	protein_coding	Adgrl2	ENSMUST00000106128	protein_coding		3	-1	148954635	6052
ENSMUSG00000036225	protein_coding	Kctd1	ENSMUST00000025992	protein_coding		18	-1	15151446	1772
ENSMUSG00000058745	processed_pseudogene	Gm9174	ENSMUST00000078149	processed_pseudogene		14	1	70360187	255
ENSMUSG00000095180	protein_coding	Rhox5	ENSMUST00000184866	protein_coding		X	1	37804842	754
ENSMUSG00000069540	transcribed_processed_pseudogene	Gm4925	ENSMUST00000168843	processed_transcript		10	-1	88731101	1561
ENSMUSG00000020807	protein_coding	4933427D14Rik	ENSMUST00000142530	nonsense_mediated_decay		11	-1	72207459	4653
ENSMUSG00000095180	protein_coding	Rhox5	ENSMUST00000179626	protein_coding	principal1	X	1	37804851	633
ENSMUSG00000069540	transcribed_processed_pseudogene	Gm4925	ENSMUST00000092231	transcribed_processed_pseudogene		10	-1	88730716	397
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000066658	retained_intron		17	1	10840384	1153
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000186167	processed_transcript		17	1	10840384	1420
ENSMUSG00000080006	processed_pseudogene	Rps19-ps7	ENSMUST00000116122	processed_pseudogene		2	-1	140073469	438
ENSMUSG00000083110	processed_pseudogene	Gm14073	ENSMUST00000117344	processed_pseudogene		2	-1	140110402	381
ENSMUSG00000036225	protein_coding	Kctd1	ENSMUST00000168989	protein_coding	principal1	18	-1	15063618	2777
ENSMUSG00000020807	protein_coding	4933427D14Rik	ENSMUST00000131546	nonsense_mediated_decay		11	-1	72207267	4377
ENSMUSG00000020807	protein_coding	4933427D14Rik	ENSMUST00000238653	protein_coding	principal1	11	-1	72207431	4390
ENSMUSG00000068437	protein_coding	Olfr725	ENSMUST00000206920	protein_coding	principal1	14	-1	50040375	1519
ENSMUSG00000020807	protein_coding	4933427D14Rik	ENSMUST00000156696	processed_transcript		11	-1	72175238	780
ENSMUSG00000020086	protein_coding	Macroh2a2	ENSMUST00000020283	protein_coding	principal1	10	-1	61784147	2175
ENSMUSG00000038473	protein_coding	Nos1ap	ENSMUST00000160466	retained_intron		1	-1	170557110	1533
ENSMUSG00000020807	protein_coding	4933427D14Rik	ENSMUST00000108505	protein_coding		11	-1	72207431	1495
ENSMUSG00000029228	protein_coding	Lnx1	ENSMUST00000127396	nonsense_mediated_decay		5	-1	74677858	2852
ENSMUSG00000020807	protein_coding	4933427D14Rik	ENSMUST00000154093	processed_transcript		11	-1	72207220	626
ENSMUSG00000036225	protein_coding	Kctd1	ENSMUST00000233993	processed_transcript		18	-1	14989235	1092
ENSMUSG00000068437	protein_coding	Olfr725	ENSMUST00000089844	protein_coding	principal1	14	-1	50035500	1110
ENSMUSG00000020807	protein_coding	4933427D14Rik	ENSMUST00000144553	processed_transcript		11	-1	72202612	555
ENSMUSG00000038473	protein_coding	Nos1ap	ENSMUST00000161966	retained_intron		1	-1	170589849	1607
ENSMUSG00000060904	protein_coding	Arl1	ENSMUST00000170137	protein_coding		10	1	88730858	575
ENSMUSG00000099411	lincRNA	2310015D24Rik	ENSMUST00000187920	lincRNA		16	-1	13520419	2917
ENSMUSG00000038473	protein_coding	Nos1ap	ENSMUST00000161485	protein_coding		1	-1	170589297	780
ENSMUSG00000036225	protein_coding	Kctd1	ENSMUST00000234221	processed_transcript		18	-1	15015324	920
ENSMUSG00000027357	protein_coding	Crls1	ENSMUST00000028835	protein_coding	principal3	2	1	132846666	1924
ENSMUSG00000099411	lincRNA	2310015D24Rik	ENSMUST00000186717	lincRNA		16	-1	13521107	576
ENSMUSG00000036225	protein_coding	Kctd1	ENSMUST00000234864	protein_coding		18	-1	15064098	749
ENSMUSG00000038473	protein_coding	Nos1ap	ENSMUST00000160816	processed_transcript		1	-1	170454914	419
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000183659	protein_coding	alternative2	7	1	48959097	7765
ENSMUSG00000036225	protein_coding	Kctd1	ENSMUST00000234685	retained_intron		18	-1	15061889	4061
ENSMUSG00000027357	protein_coding	Crls1	ENSMUST00000110122	protein_coding		2	1	132846676	703
ENSMUSG00000038473	protein_coding	Nos1ap	ENSMUST00000159665	retained_intron		1	-1	170589849	3394
ENSMUSG00000113937	processed_pseudogene	Rpl21-ps2	ENSMUST00000222933	processed_pseudogene		12	-1	13150160	481
ENSMUSG00000099661	unprocessed_pseudogene	Gm28781	ENSMUST00000185760	unprocessed_pseudogene		Y	-1	74558455	696
ENSMUSG00000040363	protein_coding	Bcor	ENSMUST00000065143	protein_coding	principal4	X	-1	12080553	6839
ENSMUSG00000040363	protein_coding	Bcor	ENSMUST00000124033	protein_coding	alternative2	X	-1	12080553	6785
ENSMUSG00000027357	protein_coding	Crls1	ENSMUST00000124834	nonsense_mediated_decay		2	1	132846688	1772
ENSMUSG00000030922	protein_coding	Lyrm1	ENSMUST00000106518	protein_coding	principal1	7	1	119895861	875
ENSMUSG00000042800	protein_coding	Spata46	ENSMUST00000056991	protein_coding	principal1	1	1	170308803	771
ENSMUSG00000057572	protein_coding	Zbtb8os	ENSMUST00000141235	protein_coding	principal1	4	1	129335695	3833
ENSMUSG00000090171	protein_coding	Ugt1a2	ENSMUST00000049289	protein_coding	principal1	1	1	88200601	2211
ENSMUSG00000024526	protein_coding	Cidea	ENSMUST00000025404	protein_coding	principal1	18	1	67343604	1115
ENSMUSG00000039879	protein_coding	Heca	ENSMUST00000217949	protein_coding		10	-1	17915222	1422
ENSMUSG00000040363	protein_coding	Bcor	ENSMUST00000043441	protein_coding	alternative2	X	-1	12160355	6113
ENSMUSG00000057572	protein_coding	Zbtb8os	ENSMUST00000146767	nonsense_mediated_decay		4	1	129335695	1160
ENSMUSG00000052736	protein_coding	Klrc2	ENSMUST00000145984	protein_coding		6	-1	129660584	2811
ENSMUSG00000057572	protein_coding	Zbtb8os	ENSMUST00000119480	protein_coding		4	1	129336012	527
ENSMUSG00000030922	protein_coding	Lyrm1	ENSMUST00000207270	protein_coding	principal1	7	1	119895861	5845
ENSMUSG00000032547	protein_coding	Ryk	ENSMUST00000175883	protein_coding	principal3	9	1	102834917	2505
ENSMUSG00000027357	protein_coding	Crls1	ENSMUST00000124836	protein_coding	alternative2	2	1	132847734	1267
ENSMUSG00000057572	protein_coding	Zbtb8os	ENSMUST00000106047	nonsense_mediated_decay		4	1	129336047	618
ENSMUSG00000040363	protein_coding	Bcor	ENSMUST00000145872	protein_coding		X	-1	12128400	573
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000191124	protein_coding	principal1	17	1	10840384	3202
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000235507	retained_intron		17	1	30626936	13457
ENSMUSG00000040363	protein_coding	Bcor	ENSMUST00000123004	protein_coding		X	-1	12128350	456
ENSMUSG00000030922	protein_coding	Lyrm1	ENSMUST00000208424	protein_coding	principal1	7	1	119895867	888
ENSMUSG00000057572	protein_coding	Zbtb8os	ENSMUST00000140272	retained_intron		4	1	129343940	436
ENSMUSG00000027357	protein_coding	Crls1	ENSMUST00000154160	protein_coding		2	1	132847738	720
ENSMUSG00000102752	protein_coding	Gm7694	ENSMUST00000179801	protein_coding	principal1	1	-1	170306332	3827
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000236118	protein_coding		17	1	30626953	589
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000235627	retained_intron		17	1	30626991	13478
ENSMUSG00000032547	protein_coding	Ryk	ENSMUST00000035142	protein_coding	alternative2	9	1	102834972	2852
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000233782	nonsense_mediated_decay		17	1	10840387	434
ENSMUSG00000040363	protein_coding	Bcor	ENSMUST00000209776	processed_transcript		X	-1	12160346	1534
ENSMUSG00000039879	protein_coding	Heca	ENSMUST00000037879	protein_coding	principal1	10	-1	17948067	5098
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184809	retained_intron		7	1	49246189	2265
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000097413	processed_transcript		17	1	10840391	4759
ENSMUSG00000029228	protein_coding	Lnx1	ENSMUST00000153543	protein_coding		5	-1	74677629	2208
ENSMUSG00000030922	protein_coding	Lyrm1	ENSMUST00000208202	protein_coding	principal1	7	1	119895870	936
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000028639	protein_coding	alternative1	2	-1	116065047	2831
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000235390	protein_coding	principal1	17	1	30626991	14604
ENSMUSG00000118402	protein_coding	Btbd35f22	ENSMUST00000238528	protein_coding	principal1	X	1	32047764	1929
ENSMUSG00000106165	processed_pseudogene	Gm3922	ENSMUST00000200519	processed_pseudogene		14	-1	53281509	435
ENSMUSG00000030922	protein_coding	Lyrm1	ENSMUST00000054440	protein_coding	principal1	7	1	119895882	752
ENSMUSG00000114897	processed_pseudogene	Gm5923	ENSMUST00000225671	processed_pseudogene		X	1	32159583	763
ENSMUSG00000052736	protein_coding	Klrc2	ENSMUST00000112057	protein_coding	principal4	6	-1	129660689	1149
ENSMUSG00000039879	protein_coding	Heca	ENSMUST00000218758	processed_transcript		10	-1	17915202	2900
ENSMUSG00000039879	protein_coding	Heca	ENSMUST00000218268	retained_intron		10	-1	17908301	360
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184945	protein_coding	principal4	7	1	49246844	10665
ENSMUSG00000024593	protein_coding	Megf10	ENSMUST00000075770	protein_coding	principal1	18	1	57133090	7514
ENSMUSG00000029228	protein_coding	Lnx1	ENSMUST00000117525	protein_coding		5	-1	74677800	2259
ENSMUSG00000032547	protein_coding	Ryk	ENSMUST00000176198	nonsense_mediated_decay		9	1	102834982	3072
ENSMUSG00000100115	lincRNA	Gm28174	ENSMUST00000191003	lincRNA		Y	1	74635822	370
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000236647	nonsense_mediated_decay		17	1	30635756	13856
ENSMUSG00000032547	protein_coding	Ryk	ENSMUST00000176573	processed_transcript		9	1	102845833	386
ENSMUSG00000030922	protein_coding	Lyrm1	ENSMUST00000106517	protein_coding	principal1	7	1	119896292	1279
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000233294	nonsense_mediated_decay		17	1	10840413	1377
ENSMUSG00000060904	protein_coding	Arl1	ENSMUST00000116234	protein_coding	principal1	10	1	88731068	2080
ENSMUSG00000001173	protein_coding	Ocrl	ENSMUST00000001202	protein_coding	principal1	X	1	47912387	5253
ENSMUSG00000101881	unprocessed_pseudogene	Gm21076	ENSMUST00000191597	unprocessed_pseudogene		Y	-1	74789646	696
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000233436	nonsense_mediated_decay		17	1	10840413	930
ENSMUSG00000052736	protein_coding	Klrc2	ENSMUST00000118401	protein_coding	alternative2	6	-1	129660596	707
ENSMUSG00000032547	protein_coding	Ryk	ENSMUST00000175788	retained_intron		9	1	102869066	551
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000237068	retained_intron		17	1	30663358	1261
ENSMUSG00000024593	protein_coding	Megf10	ENSMUST00000139892	protein_coding		18	1	57142786	3406
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000233634	nonsense_mediated_decay		17	1	10840413	1252
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000233411	nonsense_mediated_decay		17	1	10840413	793
ENSMUSG00000032547	protein_coding	Ryk	ENSMUST00000177274	retained_intron		9	1	102898555	870
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000237892	retained_intron		17	1	30670640	451
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000236948	protein_coding		17	1	30721041	1488
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000233706	protein_coding		17	1	10840470	1272
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000237432	retained_intron		17	1	30739013	1765
ENSMUSG00000101218	lincRNA	Gm29416	ENSMUST00000191328	lincRNA		Y	1	74800197	1201
ENSMUSG00000052736	protein_coding	Klrc2	ENSMUST00000149494	retained_intron		6	-1	129660615	3179
ENSMUSG00000110877	TEC	Gm47427	ENSMUST00000214076	TEC		9	1	102851835	639
ENSMUSG00000073599	protein_coding	Ecscr	ENSMUST00000097618	protein_coding	principal2	18	-1	35721491	1114
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000235140	retained_intron		17	1	30747701	3074
ENSMUSG00000001173	protein_coding	Ocrl	ENSMUST00000115020	protein_coding		X	1	47912438	3210
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000237458	retained_intron		17	1	30769519	1130
ENSMUSG00000087456	antisense	Gm16322	ENSMUST00000141275	antisense		9	1	42474555	700
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000237094	processed_transcript		17	1	30779733	1087
ENSMUSG00000030922	protein_coding	Lyrm1	ENSMUST00000106516	protein_coding	principal1	7	1	119900108	1069
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000186406	protein_coding		17	1	11303647	607
ENSMUSG00000101218	lincRNA	Gm29416	ENSMUST00000185577	lincRNA		Y	1	74800353	433
ENSMUSG00000060904	protein_coding	Arl1	ENSMUST00000080379	protein_coding		10	1	88731878	622
ENSMUSG00000087456	antisense	Gm16322	ENSMUST00000125908	antisense		9	1	42475574	257
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000235136	retained_intron		17	1	30800377	633
ENSMUSG00000062070	protein_coding	Pgk1	ENSMUST00000081593	protein_coding	principal1	X	1	106187100	1825
ENSMUSG00000029228	protein_coding	Lnx1	ENSMUST00000121690	protein_coding		5	-1	74677873	2302
ENSMUSG00000073599	protein_coding	Ecscr	ENSMUST00000133064	protein_coding	alternative2	18	-1	35722356	1055
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000190849	processed_transcript		17	1	11845210	1200
ENSMUSG00000073599	protein_coding	Ecscr	ENSMUST00000235163	nonsense_mediated_decay		18	-1	35722307	1076
ENSMUSG00000052736	protein_coding	Klrc2	ENSMUST00000119533	protein_coding	principal4	6	-1	129660556	717
ENSMUSG00000030922	protein_coding	Lyrm1	ENSMUST00000208411	processed_transcript		7	1	119900131	456
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000190894	processed_transcript		17	1	12029916	2182
ENSMUSG00000073599	protein_coding	Ecscr	ENSMUST00000134656	protein_coding		18	-1	35717290	619
ENSMUSG00000027875	protein_coding	Hmgcs2	ENSMUST00000120541	protein_coding	principal1	3	1	98280435	2524
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000218435	protein_coding		17	1	11067125	865
ENSMUSG00000073599	protein_coding	Ecscr	ENSMUST00000123973	protein_coding		18	-1	35717290	537
ENSMUSG00000047053	protein_coding	Teddm1a	ENSMUST00000050660	protein_coding	principal1	1	1	153891742	1317
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000237591	processed_transcript		17	1	30803281	469
ENSMUSG00000028807	protein_coding	Zbtb8a	ENSMUST00000030610	protein_coding	principal1	4	-1	129378116	2321
ENSMUSG00000062070	protein_coding	Pgk1	ENSMUST00000135949	nonsense_mediated_decay		X	1	106187163	1764
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000179624	protein_coding		17	1	11838602	1108
ENSMUSG00000073599	protein_coding	Ecscr	ENSMUST00000124237	processed_transcript		18	-1	35717887	359
ENSMUSG00000030922	protein_coding	Lyrm1	ENSMUST00000207680	processed_transcript		7	1	119936958	1294
ENSMUSG00000031840	protein_coding	Rab3a	ENSMUST00000110093	protein_coding	principal1	8	1	70754679	1442
ENSMUSG00000024525	protein_coding	Impa2	ENSMUST00000025403	protein_coding	principal1	18	1	67289186	5054
ENSMUSG00000023826	protein_coding	Prkn	ENSMUST00000168593	protein_coding		17	1	11067125	735
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000236870	retained_intron		17	1	30803919	563
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000235388	processed_transcript		17	1	30832179	854
ENSMUSG00000027875	protein_coding	Hmgcs2	ENSMUST00000090746	protein_coding	principal1	3	1	98280435	3290
ENSMUSG00000062070	protein_coding	Pgk1	ENSMUST00000133559	retained_intron		X	1	106191628	731
ENSMUSG00000073599	protein_coding	Ecscr	ENSMUST00000143684	processed_transcript		18	-1	35722293	462
ENSMUSG00000001173	protein_coding	Ocrl	ENSMUST00000142719	processed_transcript		X	1	47912455	2930
ENSMUSG00000052736	protein_coding	Klrc2	ENSMUST00000071920	protein_coding	alternative2	6	-1	129660689	1098
ENSMUSG00000093685	unprocessed_pseudogene	Gm18416	ENSMUST00000175635	unprocessed_pseudogene		17	-1	23117727	1003
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000237436	retained_intron		17	1	30846399	1378
ENSMUSG00000103324	TEC	Gm37402	ENSMUST00000194525	TEC		17	1	11249344	5000
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000236829	processed_transcript		17	1	30854269	983
ENSMUSG00000099797	processed_pseudogene	Gm3145	ENSMUST00000188584	processed_pseudogene		17	1	10898995	220
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000235567	retained_intron		17	1	30854515	1174
ENSMUSG00000024525	protein_coding	Impa2	ENSMUST00000236637	processed_transcript		18	1	67289252	335
ENSMUSG00000043282	protein_coding	Teddm1b	ENSMUST00000055314	protein_coding	principal1	1	1	153874345	2527
ENSMUSG00000001173	protein_coding	Ocrl	ENSMUST00000144664	retained_intron		X	1	47912467	2839
ENSMUSG00000057657	processed_pseudogene	Rps18-ps3	ENSMUST00000080443	processed_pseudogene		8	-1	107263248	456
ENSMUSG00000096429	unprocessed_pseudogene	Vmn2r-ps131	ENSMUST00000176094	unprocessed_pseudogene		17	1	23147806	1046
ENSMUSG00000031840	protein_coding	Rab3a	ENSMUST00000143118	protein_coding		8	1	70754703	508
ENSMUSG00000099618	processed_pseudogene	Gm28118	ENSMUST00000185957	processed_pseudogene		17	-1	11545798	294
ENSMUSG00000105909	sense_intronic	Gm43189	ENSMUST00000196040	sense_intronic		3	1	98286988	3069
ENSMUSG00000093714	unprocessed_pseudogene	Vmn2r-ps132	ENSMUST00000176738	unprocessed_pseudogene		17	-1	23167988	651
ENSMUSG00000001173	protein_coding	Ocrl	ENSMUST00000146486	retained_intron		X	1	47930178	727
ENSMUSG00000029228	protein_coding	Lnx1	ENSMUST00000117388	protein_coding	principal1	5	-1	74702912	2564
ENSMUSG00000001173	protein_coding	Ocrl	ENSMUST00000154732	protein_coding		X	1	47938391	799
ENSMUSG00000033826	protein_coding	Dnah8	ENSMUST00000170651	protein_coding	principal1	17	1	30624354	14583
ENSMUSG00000100402	antisense	Gm28505	ENSMUST00000190466	antisense		17	-1	11089468	680
ENSMUSG00000024525	protein_coding	Impa2	ENSMUST00000235632	processed_transcript		18	1	67308321	326
ENSMUSG00000102189	TEC	Gm37194	ENSMUST00000193092	TEC		14	1	50061360	3031
ENSMUSG00000029228	protein_coding	Lnx1	ENSMUST00000140084	protein_coding		5	-1	74623521	966
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184124	nonsense_mediated_decay		7	1	49246845	5339
ENSMUSG00000024525	protein_coding	Impa2	ENSMUST00000237149	processed_transcript		18	1	67308589	437
ENSMUSG00000001173	protein_coding	Ocrl	ENSMUST00000115013	protein_coding		X	1	47960289	2910
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184928	retained_intron		7	1	49304138	3439
ENSMUSG00000045631	protein_coding	Tmprss12	ENSMUST00000096200	protein_coding	principal1	15	1	100280837	1362
ENSMUSG00000045968	protein_coding	Teddm2	ENSMUST00000059607	protein_coding	principal2	1	-1	153851195	1654
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184955	processed_transcript		7	1	49304252	1920
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184462	retained_intron		7	1	49304254	1664
ENSMUSG00000060583	protein_coding	Olfr881	ENSMUST00000212489	protein_coding	principal1	9	1	37991825	4237
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000207743	protein_coding		7	1	49343474	431
ENSMUSG00000060583	protein_coding	Olfr881	ENSMUST00000074611	protein_coding		9	1	37992492	948
ENSMUSG00000045631	protein_coding	Tmprss12	ENSMUST00000230901	retained_intron		15	1	100280841	931
ENSMUSG00000029228	protein_coding	Lnx1	ENSMUST00000113531	protein_coding		5	-1	74677872	3098
ENSMUSG00000091705	protein_coding	H2-Q2	ENSMUST00000074806	protein_coding	principal1	17	1	35342242	1262
ENSMUSG00000116182	processed_pseudogene	Gm33666	ENSMUST00000230632	processed_pseudogene		15	1	100297171	281
ENSMUSG00000031840	protein_coding	Rab3a	ENSMUST00000034301	protein_coding	principal1	8	1	70754711	1363
ENSMUSG00000110705	unprocessed_pseudogene	Gm45701	ENSMUST00000212049	unprocessed_pseudogene		9	1	38000923	235
ENSMUSG00000045968	protein_coding	Teddm2	ENSMUST00000123490	protein_coding	alternative2	1	-1	153900208	1851
ENSMUSG00000029228	protein_coding	Lnx1	ENSMUST00000087161	protein_coding	principal1	5	-1	74685787	2753
ENSMUSG00000029096	protein_coding	Htra3	ENSMUST00000087629	protein_coding	principal1	5	-1	35679782	2750
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000064383	retained_intron		7	1	49364721	3224
ENSMUSG00000110513	unprocessed_pseudogene	Olfr882-ps1	ENSMUST00000211842	unprocessed_pseudogene		9	1	38003071	450
ENSMUSG00000031840	protein_coding	Rab3a	ENSMUST00000110090	protein_coding	principal1	8	1	70754724	1375
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184155	processed_transcript		7	1	49450760	1495
ENSMUSG00000091705	protein_coding	H2-Q2	ENSMUST00000173115	protein_coding		17	1	35344999	1150
ENSMUSG00000094461	protein_coding	Olfr883	ENSMUST00000072974	protein_coding	principal1	9	1	38025808	930
ENSMUSG00000091786	processed_pseudogene	Gm8425	ENSMUST00000171395	processed_pseudogene		16	1	36778834	769
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000102538	protein_coding	principal3	2	-1	116065047	2810
ENSMUSG00000118350	processed_pseudogene	Gm36339	ENSMUST00000237548	processed_pseudogene		19	1	53266631	234
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184109	protein_coding		7	1	49548192	890
ENSMUSG00000045968	protein_coding	Teddm2	ENSMUST00000190620	retained_intron		1	-1	153900228	3121
ENSMUSG00000031840	protein_coding	Rab3a	ENSMUST00000110092	protein_coding	principal1	8	1	70755510	1556
ENSMUSG00000046415	processed_transcript	B430212C06Rik	ENSMUST00000144078	antisense		18	-1	67327971	2589
ENSMUSG00000029096	protein_coding	Htra3	ENSMUST00000201028	nonsense_mediated_decay		5	-1	35679094	551
ENSMUSG00000102459	TEC	Gm38352	ENSMUST00000194459	TEC		1	-1	153892297	2557
ENSMUSG00000046415	processed_transcript	B430212C06Rik	ENSMUST00000145081	antisense		18	-1	67344103	2623
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184544	retained_intron		7	1	49553892	2839
ENSMUSG00000054619	protein_coding	Mettl7a1	ENSMUST00000230472	protein_coding		15	1	100304140	674
ENSMUSG00000031840	protein_coding	Rab3a	ENSMUST00000130468	retained_intron		8	1	70756457	672
ENSMUSG00000096194	protein_coding	Btbd35f2	ENSMUST00000179991	protein_coding	principal1	X	1	32278435	1907
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184102	retained_intron		7	1	49575140	1466
ENSMUSG00000046415	processed_transcript	B430212C06Rik	ENSMUST00000127708	antisense		18	-1	67343583	2569
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000184471	retained_intron		7	1	49585244	1584
ENSMUSG00000046415	processed_transcript	B430212C06Rik	ENSMUST00000128943	retained_intron		18	-1	67328150	1421
ENSMUSG00000054619	protein_coding	Mettl7a1	ENSMUST00000229574	protein_coding		15	1	100304180	646
ENSMUSG00000095893	protein_coding	Olfr884	ENSMUST00000181088	protein_coding	principal1	9	1	38046555	3185
ENSMUSG00000046415	processed_transcript	B430212C06Rik	ENSMUST00000138236	antisense		18	-1	67328210	709
ENSMUSG00000095893	protein_coding	Olfr884	ENSMUST00000077732	protein_coding	principal1	9	1	38047224	930
ENSMUSG00000029096	protein_coding	Htra3	ENSMUST00000114233	protein_coding		5	-1	35679472	1901
ENSMUSG00000106875	TEC	Gm43093	ENSMUST00000202439	TEC		5	1	46502129	1213
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000183715	retained_intron		7	1	49587417	1290
ENSMUSG00000054619	protein_coding	Mettl7a1	ENSMUST00000229217	protein_coding		15	1	100304182	742
ENSMUSG00000118459	protein_coding	Btbd35f1	ENSMUST00000238237	protein_coding	principal1	X	1	32560096	1908
ENSMUSG00000107113	TEC	Gm43092	ENSMUST00000202986	TEC		5	1	46794680	1854
ENSMUSG00000006200	protein_coding	Rhox6	ENSMUST00000006362	protein_coding	principal1	X	1	37826910	1010
ENSMUSG00000104660	TEC	Gm43601	ENSMUST00000196294	TEC		5	1	47153651	945
ENSMUSG00000054619	protein_coding	Mettl7a1	ENSMUST00000230252	protein_coding		15	1	100304206	333
ENSMUSG00000052512	protein_coding	Nav2	ENSMUST00000064395	protein_coding	alternative2	7	1	49246189	11317
ENSMUSG00000084384	processed_pseudogene	Gm12251	ENSMUST00000117893	processed_pseudogene		11	-1	58393560	792
ENSMUSG00000094601	protein_coding	Gm5926	ENSMUST00000178459	protein_coding	principal1	X	1	32649793	1015
ENSMUSG00000054619	protein_coding	Mettl7a1	ENSMUST00000231166	protein_coding		15	1	100304228	769
ENSMUSG00000094601	protein_coding	Gm5926	ENSMUST00000177740	protein_coding	principal1	X	1	32650716	711
ENSMUSG00000106402	processed_pseudogene	Gm17824	ENSMUST00000197690	processed_pseudogene		5	1	47634502	805
ENSMUSG00000082181	processed_pseudogene	Gm12252	ENSMUST00000119517	processed_pseudogene		11	-1	58396515	219
ENSMUSG00000029096	protein_coding	Htra3	ENSMUST00000129459	protein_coding		5	-1	35671552	641
ENSMUSG00000024350	protein_coding	Dnajc18	ENSMUST00000025208	protein_coding	principal1	18	-1	35703121	5146
ENSMUSG00000105616	processed_pseudogene	Gm3010	ENSMUST00000198805	processed_pseudogene		5	1	47699845	448
ENSMUSG00000109203	lincRNA	Gm32849	ENSMUST00000208696	lincRNA		7	1	49085083	1798
ENSMUSG00000070939	protein_coding	Tgfbrap1	ENSMUST00000095014	protein_coding	principal1	1	-1	43098622	5607
ENSMUSG00000029096	protein_coding	Htra3	ENSMUST00000137935	protein_coding		5	-1	35671553	698
ENSMUSG00000029096	protein_coding	Htra3	ENSMUST00000200810	retained_intron		5	-1	35679462	1080
ENSMUSG00000024350	protein_coding	Dnajc18	ENSMUST00000235930	nonsense_mediated_decay		18	-1	35686743	569
ENSMUSG00000108950	antisense	9130015G15Rik	ENSMUST00000208636	antisense		7	-1	49134276	1890
ENSMUSG00000070939	protein_coding	Tgfbrap1	ENSMUST00000186694	protein_coding	principal1	1	-1	43092729	5385
ENSMUSG00000108950	antisense	9130015G15Rik	ENSMUST00000208621	antisense		7	-1	49159819	1973
ENSMUSG00000024810	protein_coding	Il33	ENSMUST00000120388	protein_coding	principal1	19	1	29925114	2537
ENSMUSG00000070939	protein_coding	Tgfbrap1	ENSMUST00000188598	retained_intron		1	-1	43060933	3160
ENSMUSG00000085995	processed_transcript	Gm2788	ENSMUST00000129551	antisense		7	1	48877958	797
ENSMUSG00000035559	protein_coding	Mpv17l2	ENSMUST00000038626	protein_coding	principal1	8	-1	70760946	980
ENSMUSG00000070939	protein_coding	Tgfbrap1	ENSMUST00000188728	protein_coding		1	-1	43092447	831
ENSMUSG00000030380	protein_coding	Mzf1	ENSMUST00000069289	protein_coding		7	-1	13054764	3597
ENSMUSG00000054619	protein_coding	Mettl7a1	ENSMUST00000067752	protein_coding	principal1	15	1	100304761	1946
ENSMUSG00000024810	protein_coding	Il33	ENSMUST00000144528	protein_coding		19	1	29925115	377
ENSMUSG00000030747	protein_coding	Dgat2	ENSMUST00000033001	protein_coding	principal1	7	-1	99182719	2262
ENSMUSG00000070939	protein_coding	Tgfbrap1	ENSMUST00000190427	protein_coding		1	-1	43098608	697
ENSMUSG00000004654	protein_coding	Ghrhr	ENSMUST00000204988	retained_intron		6	1	55376295	2565
ENSMUSG00000024810	protein_coding	Il33	ENSMUST00000177518	protein_coding		19	1	29925132	725
ENSMUSG00000035559	protein_coding	Mpv17l2	ENSMUST00000213010	retained_intron		8	-1	70760837	692
ENSMUSG00000085995	processed_transcript	Gm2788	ENSMUST00000210463	antisense		7	1	48877966	1338
ENSMUSG00000085995	processed_transcript	Gm2788	ENSMUST00000209849	antisense		7	1	48877966	933
ENSMUSG00000085995	processed_transcript	Gm2788	ENSMUST00000209288	antisense		7	1	48878025	1966
ENSMUSG00000035559	protein_coding	Mpv17l2	ENSMUST00000212617	nonsense_mediated_decay		8	-1	70760462	308
ENSMUSG00000070939	protein_coding	Tgfbrap1	ENSMUST00000187525	retained_intron		1	-1	43092463	1795
ENSMUSG00000070939	protein_coding	Tgfbrap1	ENSMUST00000187872	retained_intron		1	-1	43098637	3257
ENSMUSG00000054619	protein_coding	Mettl7a1	ENSMUST00000229588	protein_coding		15	1	100304789	1001
ENSMUSG00000090124	protein_coding	Ugt1a7c	ENSMUST00000150634	protein_coding		1	1	88095062	682
ENSMUSG00000035559	protein_coding	Mpv17l2	ENSMUST00000212385	processed_transcript		8	-1	70760900	339
ENSMUSG00000070939	protein_coding	Tgfbrap1	ENSMUST00000189010	protein_coding		1	-1	43098364	785
ENSMUSG00000054619	protein_coding	Mettl7a1	ENSMUST00000230018	nonsense_mediated_decay		15	1	100305171	449
ENSMUSG00000117762	lincRNA	Gm30889	ENSMUST00000236957	lincRNA		18	1	82902078	1045
ENSMUSG00000030747	protein_coding	Dgat2	ENSMUST00000207491	nonsense_mediated_decay		7	-1	99182677	740
ENSMUSG00000031820	protein_coding	Babam1	ENSMUST00000002473	protein_coding	principal1	8	1	71396861	1433
ENSMUSG00000085995	processed_transcript	Gm2788	ENSMUST00000147173	antisense		7	1	48881300	1390
ENSMUSG00000085995	processed_transcript	Gm2788	ENSMUST00000211055	antisense		7	1	48887230	1078
ENSMUSG00000024810	protein_coding	Il33	ENSMUST00000025724	protein_coding	principal1	19	1	29945790	2544
ENSMUSG00000041878	antisense	8430432A02Rik	ENSMUST00000039080	antisense		1	1	43092588	1248
ENSMUSG00000030380	protein_coding	Mzf1	ENSMUST00000182515	protein_coding	principal2	7	-1	13054665	3340
ENSMUSG00000024350	protein_coding	Dnajc18	ENSMUST00000237995	protein_coding		18	-1	35708414	909
ENSMUSG00000085995	processed_transcript	Gm2788	ENSMUST00000208790	retained_intron		7	1	48898807	4007
ENSMUSG00000114208	lincRNA	Gm34307	ENSMUST00000224127	lincRNA		13	-1	59145828	683
ENSMUSG00000109507	processed_pseudogene	Gm18559	ENSMUST00000208249	processed_pseudogene		7	-1	48940118	604
ENSMUSG00000030747	protein_coding	Dgat2	ENSMUST00000207894	retained_intron		7	-1	99170106	642
ENSMUSG00000025978	protein_coding	Rftn2	ENSMUST00000027121	protein_coding	principal1	1	-1	55226782	3677
ENSMUSG00000024350	protein_coding	Dnajc18	ENSMUST00000236738	protein_coding		18	-1	35708382	582
ENSMUSG00000030747	protein_coding	Dgat2	ENSMUST00000208591	nonsense_mediated_decay		7	-1	99182719	739
ENSMUSG00000110093	lincRNA	Gm45282	ENSMUST00000209439	lincRNA		7	-1	48910062	681
ENSMUSG00000024810	protein_coding	Il33	ENSMUST00000136850	protein_coding		19	1	29951816	370
ENSMUSG00000031820	protein_coding	Babam1	ENSMUST00000213093	processed_transcript		8	1	71398422	259
ENSMUSG00000030380	protein_coding	Mzf1	ENSMUST00000182490	protein_coding	alternative2	7	-1	13053684	2872
ENSMUSG00000114854	lincRNA	Gm34354	ENSMUST00000225447	lincRNA		13	1	59145873	1735
ENSMUSG00000031820	protein_coding	Babam1	ENSMUST00000212769	protein_coding		8	1	71399526	349
ENSMUSG00000114854	lincRNA	Gm34354	ENSMUST00000224959	lincRNA		13	1	59145959	1958
ENSMUSG00000112769	processed_pseudogene	Rpl17-ps2	ENSMUST00000218101	processed_pseudogene		12	1	95684196	532
ENSMUSG00000114854	lincRNA	Gm34354	ENSMUST00000226009	lincRNA		13	1	59145959	1419
ENSMUSG00000030747	protein_coding	Dgat2	ENSMUST00000207611	protein_coding		7	-1	99180293	379
ENSMUSG00000114854	lincRNA	Gm34354	ENSMUST00000225571	lincRNA		13	1	59147828	3508
ENSMUSG00000114854	lincRNA	Gm34354	ENSMUST00000224190	lincRNA		13	1	59190978	9762
ENSMUSG00000031820	protein_coding	Babam1	ENSMUST00000212383	retained_intron		8	1	71402222	707
ENSMUSG00000114854	lincRNA	Gm34354	ENSMUST00000223884	lincRNA		13	1	59193810	3698
ENSMUSG00000101612	processed_pseudogene	Gm7933	ENSMUST00000191215	processed_pseudogene		1	1	33371331	2255
ENSMUSG00000114958	lincRNA	Gm48612	ENSMUST00000224746	lincRNA		13	-1	47340939	656
ENSMUSG00000073598	protein_coding	1700066B19Rik	ENSMUST00000143778	processed_transcript		18	1	35703225	1630
ENSMUSG00000030747	protein_coding	Dgat2	ENSMUST00000207893	processed_transcript		7	-1	99182696	679
ENSMUSG00000031820	protein_coding	Babam1	ENSMUST00000212087	retained_intron		8	1	71402784	449
ENSMUSG00000114393	lincRNA	Gm47359	ENSMUST00000225101	lincRNA		13	-1	59182743	665
ENSMUSG00000090124	protein_coding	Ugt1a7c	ENSMUST00000058237	protein_coding	principal3	1	1	88095064	3231
ENSMUSG00000045912	protein_coding	C2cd4c	ENSMUST00000059699	protein_coding	principal1	10	-1	79614000	6729
ENSMUSG00000025978	protein_coding	Rftn2	ENSMUST00000132055	nonsense_mediated_decay		1	-1	55226782	1870
ENSMUSG00000114843	lincRNA	Gm35733	ENSMUST00000224000	lincRNA		13	1	47361386	704
ENSMUSG00000114393	lincRNA	Gm47359	ENSMUST00000224550	lincRNA		13	-1	59182816	1031
ENSMUSG00000025582	protein_coding	Nptx1	ENSMUST00000026670	protein_coding	principal1	11	-1	119547753	5217
ENSMUSG00000025978	protein_coding	Rftn2	ENSMUST00000114428	protein_coding		1	-1	55226782	2012
ENSMUSG00000030380	protein_coding	Mzf1	ENSMUST00000182293	retained_intron		7	-1	13054341	3749
ENSMUSG00000081435	processed_pseudogene	Gm11403	ENSMUST00000122195	processed_pseudogene		4	1	67165479	369
ENSMUSG00000090124	protein_coding	Ugt1a7c	ENSMUST00000126203	nonsense_mediated_decay		1	1	88095114	843
ENSMUSG00000073598	protein_coding	1700066B19Rik	ENSMUST00000097617	protein_coding	principal1	18	1	35726989	2504
ENSMUSG00000032548	protein_coding	Slco2a1	ENSMUST00000185215	processed_transcript		9	1	102988712	3686
ENSMUSG00000025978	protein_coding	Rftn2	ENSMUST00000133294	processed_transcript		1	-1	55206489	602
ENSMUSG00000114509	lincRNA	4930471G24Rik	ENSMUST00000223996	lincRNA		13	1	47667550	692
ENSMUSG00000030380	protein_coding	Mzf1	ENSMUST00000182087	protein_coding		7	-1	13054514	2197
ENSMUSG00000098126	processed_pseudogene	Gm27037	ENSMUST00000182270	processed_pseudogene		18	-1	89944312	960
ENSMUSG00000025978	protein_coding	Rftn2	ENSMUST00000141107	processed_transcript		1	-1	55226782	1976
ENSMUSG00000045912	protein_coding	C2cd4c	ENSMUST00000178228	protein_coding	principal1	10	-1	79614025	2761
ENSMUSG00000030380	protein_coding	Mzf1	ENSMUST00000210727	processed_transcript		7	-1	13052380	578
ENSMUSG00000118035	processed_pseudogene	Gm6173	ENSMUST00000237041	processed_pseudogene		18	-1	90019079	1259
ENSMUSG00000017716	protein_coding	Birc5	ENSMUST00000081387	protein_coding	principal1	11	1	117849251	947
ENSMUSG00000090124	protein_coding	Ugt1a7c	ENSMUST00000113135	protein_coding	alternative2	1	1	88103252	3302
ENSMUSG00000030380	protein_coding	Mzf1	ENSMUST00000183176	retained_intron		7	-1	13054723	4015
ENSMUSG00000091697	processed_pseudogene	Eif3s6-ps2	ENSMUST00000163304	processed_pseudogene		18	-1	90312190	1323
ENSMUSG00000097649	antisense	Gm10561	ENSMUST00000181563	antisense		1	1	55226251	1943
ENSMUSG00000117726	processed_pseudogene	Gm7674	ENSMUST00000237935	processed_pseudogene		18	-1	90322880	990
ENSMUSG00000056370	protein_coding	Sftpb	ENSMUST00000183018	protein_coding	principal1	6	1	72304610	1490
ENSMUSG00000097649	antisense	Gm10561	ENSMUST00000209801	antisense		1	1	55226298	751
ENSMUSG00000117613	lincRNA	Gm2629	ENSMUST00000235045	lincRNA		18	1	15194782	1595
ENSMUSG00000118372	processed_pseudogene	Gm50434	ENSMUST00000236347	processed_pseudogene		18	1	90342486	117
ENSMUSG00000117404	lincRNA	Gm50035	ENSMUST00000234417	lincRNA		18	-1	15207791	1060
ENSMUSG00000117805	lincRNA	Gm18280	ENSMUST00000237124	lincRNA		18	-1	90483460	682
ENSMUSG00000058881	protein_coding	Zfp516	ENSMUST00000235793	protein_coding		18	1	82910663	765
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000124112	retained_intron		11	1	70432635	574
ENSMUSG00000058881	protein_coding	Zfp516	ENSMUST00000236858	protein_coding		18	1	82910927	348
ENSMUSG00000101128	unprocessed_pseudogene	Gm21869	ENSMUST00000189976	unprocessed_pseudogene		Y	-1	74951338	696
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000037633	protein_coding	principal1	16	-1	11176393	3825
ENSMUSG00000058881	protein_coding	Zfp516	ENSMUST00000235902	protein_coding		18	1	82911332	370
ENSMUSG00000101788	unprocessed_pseudogene	Gm20813	ENSMUST00000186646	unprocessed_pseudogene		Y	-1	75026084	705
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000076313	protein_coding		2	-1	53191225	7374
ENSMUSG00000017716	protein_coding	Birc5	ENSMUST00000093906	protein_coding		11	1	117849319	3334
ENSMUSG00000102087	unprocessed_pseudogene	Gm28790	ENSMUST00000189642	unprocessed_pseudogene		Y	-1	75055678	615
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000138282	retained_intron		16	-1	11140891	699
ENSMUSG00000056370	protein_coding	Sftpb	ENSMUST00000182014	nonsense_mediated_decay		6	1	72304620	1549
ENSMUSG00000117380	lincRNA	E430002N23Rik	ENSMUST00000234159	lincRNA		18	-1	15312699	1776
ENSMUSG00000056370	protein_coding	Sftpb	ENSMUST00000183278	nonsense_mediated_decay		6	1	72304625	1135
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000210789	protein_coding	alternative2	2	-1	53191284	3773
ENSMUSG00000101428	unprocessed_pseudogene	Gm29272	ENSMUST00000185476	unprocessed_pseudogene		Y	-1	75092594	696
ENSMUSG00000018914	protein_coding	Il3	ENSMUST00000019058	protein_coding	principal1	11	-1	54267277	629
ENSMUSG00000071767	protein_coding	Rhox7a	ENSMUST00000096454	protein_coding	principal1	X	1	37831686	983
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000143121	retained_intron		16	-1	11141907	521
ENSMUSG00000117645	lincRNA	A830021F12Rik	ENSMUST00000234122	lincRNA		18	1	15351934	3401
ENSMUSG00000056370	protein_coding	Sftpb	ENSMUST00000182765	retained_intron		6	1	72306406	1164
ENSMUSG00000056370	protein_coding	Sftpb	ENSMUST00000070437	protein_coding		6	1	72304625	1131
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000133384	processed_transcript		2	-1	53145309	597
ENSMUSG00000105994	processed_pseudogene	Gm43427	ENSMUST00000198188	processed_pseudogene		5	1	47975005	331
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000209364	protein_coding	alternative2	2	-1	53191702	3251
ENSMUSG00000080815	processed_pseudogene	Hmgb1-rs18	ENSMUST00000117940	processed_pseudogene		4	-1	67518932	627
ENSMUSG00000071767	protein_coding	Rhox7a	ENSMUST00000184891	nonsense_mediated_decay		X	1	37837852	409
ENSMUSG00000025952	protein_coding	Crygc	ENSMUST00000027089	protein_coding	principal3	1	-1	65073689	783
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000140898	nonsense_mediated_decay		16	-1	11148510	748
ENSMUSG00000047242	protein_coding	Taf9b	ENSMUST00000055497	protein_coding	principal1	X	-1	106219901	2633
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000211712	nonsense_mediated_decay		2	-1	53191250	2227
ENSMUSG00000004654	protein_coding	Ghrhr	ENSMUST00000063578	protein_coding	principal1	6	1	55376343	1550
ENSMUSG00000070816	protein_coding	Vmn1r86	ENSMUST00000227220	protein_coding	principal2	7	-1	13119852	6445
ENSMUSG00000114959	lincRNA	G630093K05Rik	ENSMUST00000223677	lincRNA		13	1	47910435	3502
ENSMUSG00000070816	protein_coding	Vmn1r86	ENSMUST00000227700	protein_coding	alternative2	7	-1	13119916	5487
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000033018	protein_coding	principal3	7	1	113513834	4962
ENSMUSG00000070816	protein_coding	Vmn1r86	ENSMUST00000226604	protein_coding	principal2	7	-1	13119917	6378
ENSMUSG00000003234	protein_coding	Abcf3	ENSMUST00000003319	protein_coding	principal1	16	1	20548577	3090
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000125243	nonsense_mediated_decay		2	-1	53191172	1425
ENSMUSG00000070816	protein_coding	Vmn1r86	ENSMUST00000094828	protein_coding	principal2	7	-1	13102947	951
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000211102	nonsense_mediated_decay		2	-1	53190100	1074
ENSMUSG00000047242	protein_coding	Taf9b	ENSMUST00000113495	protein_coding		X	-1	106221158	2512
ENSMUSG00000004654	protein_coding	Ghrhr	ENSMUST00000203241	protein_coding		6	1	55376365	1328
ENSMUSG00000024815	protein_coding	Trpd52l3	ENSMUST00000025727	protein_coding	principal1	19	1	30003790	2229
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000129087	protein_coding		7	1	113513861	769
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000209508	nonsense_mediated_decay		2	-1	53191250	1290
ENSMUSG00000025952	protein_coding	Crygc	ENSMUST00000114064	protein_coding	alternative1	1	-1	65073521	612
ENSMUSG00000003234	protein_coding	Abcf3	ENSMUST00000232680	protein_coding		16	1	20548644	1762
ENSMUSG00000070817	protein_coding	Vmn1r85	ENSMUST00000209822	protein_coding	principal1	7	-1	13095173	6237
ENSMUSG00000108228	lincRNA	6430584L05Rik	ENSMUST00000204412	lincRNA		6	1	55396887	3151
ENSMUSG00000108228	lincRNA	6430584L05Rik	ENSMUST00000209841	lincRNA		6	1	55405312	117
ENSMUSG00000047242	protein_coding	Taf9b	ENSMUST00000134547	protein_coding		X	-1	106220750	752
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000140755	nonsense_mediated_decay		16	-1	11176341	2763
ENSMUSG00000031481	protein_coding	Tpte	ENSMUST00000211747	nonsense_mediated_decay		8	1	22283441	2672
ENSMUSG00000083087	processed_pseudogene	Gm11249	ENSMUST00000117071	processed_pseudogene		4	1	67930881	859
ENSMUSG00000070817	protein_coding	Vmn1r85	ENSMUST00000235753	protein_coding	principal1	7	-1	13095173	7074
ENSMUSG00000058881	protein_coding	Zfp516	ENSMUST00000071233	protein_coding	principal1	18	1	82914632	7703
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000152922	processed_transcript		2	-1	53191204	3065
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000138185	protein_coding		16	-1	11176100	2428
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000132031	processed_transcript		2	-1	53191225	665
ENSMUSG00000105876	processed_transcript	Gm43572	ENSMUST00000196494	processed_transcript		3	1	149005496	519
ENSMUSG00000070817	protein_coding	Vmn1r85	ENSMUST00000094829	protein_coding	principal1	7	-1	13085215	927
ENSMUSG00000003234	protein_coding	Abcf3	ENSMUST00000232490	protein_coding		16	1	20548676	532
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000143926	retained_intron		16	-1	11147360	553
ENSMUSG00000086364	lincRNA	Gm11751	ENSMUST00000126187	lincRNA		4	1	68023031	460
ENSMUSG00000058881	protein_coding	Zfp516	ENSMUST00000237340	protein_coding		18	1	82917754	427
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000123845	retained_intron		7	1	113513861	1218
ENSMUSG00000110268	lincRNA	Gm45436	ENSMUST00000210729	lincRNA		7	1	13093172	469
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000140775	retained_intron		16	-1	11151418	829
ENSMUSG00000061136	protein_coding	Prpf40a	ENSMUST00000239398	protein_coding	principal2	2	-1	53191187	3565
ENSMUSG00000109707	processed_pseudogene	Gm4270	ENSMUST00000209666	processed_pseudogene		7	1	13094992	406
ENSMUSG00000079070	lincRNA	Gm3985	ENSMUST00000132101	lincRNA		8	-1	32950026	2515
ENSMUSG00000031481	protein_coding	Tpte	ENSMUST00000077194	protein_coding	principal1	8	1	22283441	2549
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000067929	protein_coding	alternative1	7	1	113513861	4935
ENSMUSG00000073658	protein_coding	Crygb	ENSMUST00000027090	protein_coding	principal1	1	-1	65082288	634
ENSMUSG00000079070	lincRNA	Gm3985	ENSMUST00000180220	lincRNA		8	-1	32942482	324
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000128083	protein_coding		16	-1	11174977	2067
ENSMUSG00000058881	protein_coding	Zfp516	ENSMUST00000236468	protein_coding		18	1	82987808	924
ENSMUSG00000100140	lincRNA	Gm28789	ENSMUST00000190429	lincRNA		Y	1	75133734	1499
ENSMUSG00000013653	protein_coding	1810065E05Rik	ENSMUST00000013797	protein_coding	principal1	11	1	58421111	926
ENSMUSG00000058881	protein_coding	Zfp516	ENSMUST00000171238	protein_coding	principal1	18	1	82910879	7725
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000155343	retained_intron		16	-1	11151222	549
ENSMUSG00000100140	lincRNA	Gm28789	ENSMUST00000187068	lincRNA		Y	1	75134187	438
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000136158	protein_coding		7	1	113513877	733
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000139391	retained_intron		16	-1	11152748	925
ENSMUSG00000031555	protein_coding	Adam9	ENSMUST00000208247	protein_coding	principal2	8	-1	25016927	4044
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000156554	retained_intron		7	1	113513881	413
ENSMUSG00000003234	protein_coding	Abcf3	ENSMUST00000232127	processed_transcript		16	1	20549263	709
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000155340	retained_intron		16	-1	11156076	516
ENSMUSG00000031555	protein_coding	Adam9	ENSMUST00000207132	protein_coding		8	-1	25016819	516
ENSMUSG00000118339	processed_transcript	4930592I03Rik	ENSMUST00000236556	antisense		18	-1	82920548	977
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000122890	protein_coding		7	1	113514098	445
ENSMUSG00000003234	protein_coding	Abcf3	ENSMUST00000152339	retained_intron		16	1	20549668	718
ENSMUSG00000118339	processed_transcript	4930592I03Rik	ENSMUST00000237056	lincRNA		18	-1	82920560	377
ENSMUSG00000047324	lincRNA	4931429P17Rik	ENSMUST00000061899	lincRNA		13	-1	48018608	2012
ENSMUSG00000031555	protein_coding	Adam9	ENSMUST00000211319	nonsense_mediated_decay		8	-1	24997790	834
ENSMUSG00000114478	lincRNA	Gm34558	ENSMUST00000225924	lincRNA		13	-1	59217172	724
ENSMUSG00000114743	lincRNA	Gm34672	ENSMUST00000224640	lincRNA		13	-1	59255411	1247
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000142844	retained_intron		16	-1	11158741	662
ENSMUSG00000005917	protein_coding	Otx1	ENSMUST00000006071	protein_coding	principal1	11	-1	22001615	2789
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000123591	retained_intron		7	1	113547459	1674
ENSMUSG00000110214	lincRNA	Gm45587	ENSMUST00000211548	lincRNA		8	-1	33056091	765
ENSMUSG00000114240	lincRNA	Gm47360	ENSMUST00000225371	lincRNA		13	-1	59330243	395
ENSMUSG00000090145	protein_coding	Ugt1a6b	ENSMUST00000113138	protein_coding	principal1	1	1	88103252	2303
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000145457	retained_intron		16	-1	11158763	2272
ENSMUSG00000081231	processed_pseudogene	Tcp1-ps1	ENSMUST00000120941	processed_pseudogene		4	-1	68303290	1466
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000130355	protein_coding		16	-1	11174944	730
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000155183	retained_intron		7	1	113560915	775
ENSMUSG00000094445	protein_coding	1700015G11Rik	ENSMUST00000180038	protein_coding	principal1	7	-1	52015728	397
ENSMUSG00000114240	lincRNA	Gm47360	ENSMUST00000224998	lincRNA		13	-1	59326797	631
ENSMUSG00000083557	processed_pseudogene	Gm6877	ENSMUST00000119347	processed_pseudogene		8	-1	33192296	1101
ENSMUSG00000031555	protein_coding	Adam9	ENSMUST00000084032	protein_coding	alternative2	8	-1	25016812	3834
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000151133	retained_intron		7	1	113566100	524
ENSMUSG00000071452	protein_coding	Serpinb9h	ENSMUST00000050276	protein_coding	principal1	13	1	33395761	1862
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000125537	protein_coding		16	-1	11175565	349
ENSMUSG00000026473	protein_coding	Glul	ENSMUST00000086199	protein_coding	principal1	1	1	153899944	2792
ENSMUSG00000090145	protein_coding	Ugt1a6b	ENSMUST00000113137	protein_coding	principal1	1	1	88106862	2249
ENSMUSG00000114240	lincRNA	Gm47360	ENSMUST00000224237	lincRNA		13	-1	59330016	336
ENSMUSG00000094445	protein_coding	1700015G11Rik	ENSMUST00000185758	protein_coding		7	-1	52015703	366
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000142389	protein_coding		16	-1	11176064	414
ENSMUSG00000086790	lincRNA	Gm12911	ENSMUST00000140639	lincRNA		4	-1	68321961	703
ENSMUSG00000005917	protein_coding	Otx1	ENSMUST00000172395	retained_intron		11	-1	22001710	5273
ENSMUSG00000003234	protein_coding	Abcf3	ENSMUST00000154660	retained_intron		16	1	20550577	888
ENSMUSG00000114200	lincRNA	Gm34721	ENSMUST00000225350	lincRNA		13	-1	59409301	3250
ENSMUSG00000094445	protein_coding	1700015G11Rik	ENSMUST00000190307	protein_coding		7	-1	52015695	255
ENSMUSG00000031555	protein_coding	Adam9	ENSMUST00000084035	protein_coding	alternative2	8	-1	25016922	3985
ENSMUSG00000005917	protein_coding	Otx1	ENSMUST00000147486	protein_coding		11	-1	22002897	771
ENSMUSG00000094445	protein_coding	1700015G11Rik	ENSMUST00000185841	protein_coding		7	-1	52015682	305
ENSMUSG00000030759	protein_coding	Far1	ENSMUST00000164745	protein_coding	principal3	7	1	113513862	3972
ENSMUSG00000003234	protein_coding	Abcf3	ENSMUST00000231590	processed_transcript		16	1	20551661	219
ENSMUSG00000109526	processed_pseudogene	Gm9357	ENSMUST00000207138	processed_pseudogene		7	-1	52029158	805
ENSMUSG00000026473	protein_coding	Glul	ENSMUST00000140685	protein_coding	principal1	1	1	153900585	1696
ENSMUSG00000037965	protein_coding	Zc3h7a	ENSMUST00000155255	retained_intron		16	-1	11176342	1346
ENSMUSG00000003234	protein_coding	Abcf3	ENSMUST00000231258	protein_coding		16	1	20551979	575
ENSMUSG00000109026	processed_pseudogene	Gm44683	ENSMUST00000209088	processed_pseudogene		7	1	52219960	484
ENSMUSG00000026473	protein_coding	Glul	ENSMUST00000139476	protein_coding		1	1	153900606	681
ENSMUSG00000028644	protein_coding	Ermap	ENSMUST00000239029	protein_coding	alternative2	4	-1	119190011	4551
ENSMUSG00000003234	protein_coding	Abcf3	ENSMUST00000135861	retained_intron		16	1	20559344	610
ENSMUSG00000114810	lincRNA	Gm36101	ENSMUST00000223995	lincRNA		13	1	48031773	2996
ENSMUSG00000109099	processed_pseudogene	Gm20074	ENSMUST00000208144	processed_pseudogene		7	1	52411453	484
ENSMUSG00000072460	processed_pseudogene	Atp5l-ps1	ENSMUST00000097132	processed_pseudogene		7	1	62476306	312
ENSMUSG00000026473	protein_coding	Glul	ENSMUST00000153134	processed_transcript		1	1	153903798	442
ENSMUSG00000003234	protein_coding	Abcf3	ENSMUST00000148679	protein_coding		16	1	20559657	845
ENSMUSG00000108928	unprocessed_pseudogene	Vmn2r-ps61	ENSMUST00000207286	unprocessed_pseudogene		7	-1	62578216	889
ENSMUSG00000026473	protein_coding	Glul	ENSMUST00000154576	retained_intron		1	1	153906043	550
ENSMUSG00000074092	processed_pseudogene	Gm6181	ENSMUST00000117187	processed_pseudogene		7	1	52755465	264
ENSMUSG00000109204	processed_pseudogene	Gm9445	ENSMUST00000207454	processed_pseudogene		7	-1	62684686	1285
ENSMUSG00000109312	TEC	Gm44682	ENSMUST00000208501	TEC		7	1	53995942	2614
ENSMUSG00000035885	protein_coding	Cox8a	ENSMUST00000039758	protein_coding	principal1	19	-1	7217616	550
ENSMUSG00000106888	antisense	Gm42848	ENSMUST00000201477	antisense		5	1	34221162	2022
ENSMUSG00000093955	IG_V_gene	Ighv1-34	ENSMUST00000103512	IG_V_gene	principal1	12	-1	114851660	388
ENSMUSG00000100512	protein_coding	Ovol3	ENSMUST00000189482	protein_coding	principal1	7	-1	30235725	731
ENSMUSG00000099647	processed_pseudogene	Gm5776	ENSMUST00000122119	processed_pseudogene		7	-1	54412478	321
ENSMUSG00000092395	antisense	Gm20463	ENSMUST00000174756	antisense		17	1	34601151	366
ENSMUSG00000103554	IG_V_pseudogene	Ighv1-35	ENSMUST00000195265	IG_V_pseudogene		12	-1	114875737	351
ENSMUSG00000035885	protein_coding	Cox8a	ENSMUST00000237087	nonsense_mediated_decay		19	-1	7217543	504
ENSMUSG00000054545	protein_coding	Ugt1a6a	ENSMUST00000113134	protein_coding	principal1	1	1	88134809	2297
ENSMUSG00000094051	IG_V_gene	Ighv1-36	ENSMUST00000191862	IG_V_gene	principal5	12	-1	114880321	351
ENSMUSG00000054545	protein_coding	Ugt1a6a	ENSMUST00000124852	retained_intron		1	1	88134813	3342
ENSMUSG00000094051	IG_V_gene	Ighv1-36	ENSMUST00000103513	IG_V_gene	alternative2	12	-1	114880321	348
ENSMUSG00000045624	protein_coding	Esf1	ENSMUST00000046030	protein_coding	principal1	2	-1	140170564	3396
ENSMUSG00000108424	processed_pseudogene	Gm44590	ENSMUST00000206161	processed_pseudogene		7	1	97918245	391
ENSMUSG00000054545	protein_coding	Ugt1a6a	ENSMUST00000140092	protein_coding		1	1	88134882	608
ENSMUSG00000054545	protein_coding	Ugt1a6a	ENSMUST00000014263	protein_coding	principal1	1	1	88138378	2265
ENSMUSG00000095923	IG_V_gene	Ighv1-37	ENSMUST00000193950	IG_V_gene	principal5	12	-1	114896671	351
ENSMUSG00000095923	IG_V_gene	Ighv1-37	ENSMUST00000103514	IG_V_gene	alternative2	12	-1	114896671	348
ENSMUSG00000045624	protein_coding	Esf1	ENSMUST00000141086	retained_intron		2	-1	140160483	533
ENSMUSG00000028644	protein_coding	Ermap	ENSMUST00000030396	protein_coding		4	-1	119189976	4378
ENSMUSG00000045624	protein_coding	Esf1	ENSMUST00000137005	retained_intron		2	-1	140160483	639
ENSMUSG00000033196	protein_coding	Myh2	ENSMUST00000124337	retained_intron		11	1	67171066	1488
ENSMUSG00000045624	protein_coding	Esf1	ENSMUST00000151317	retained_intron		2	-1	140158843	613
ENSMUSG00000028644	protein_coding	Ermap	ENSMUST00000127574	retained_intron		4	-1	119189976	2855
ENSMUSG00000045624	protein_coding	Esf1	ENSMUST00000153769	retained_intron		2	-1	140155305	617
ENSMUSG00000039084	protein_coding	Chad	ENSMUST00000040418	protein_coding	principal1	11	1	94565047	1680
ENSMUSG00000015478	protein_coding	Rnf5	ENSMUST00000015622	protein_coding	principal1	17	-1	34603690	1238
ENSMUSG00000028644	protein_coding	Ermap	ENSMUST00000137080	processed_transcript		4	-1	119189956	376
ENSMUSG00000021379	protein_coding	Id4	ENSMUST00000021810	protein_coding	principal1	13	1	48261228	3849
ENSMUSG00000028644	protein_coding	Ermap	ENSMUST00000133956	protein_coding		4	-1	119188747	606
ENSMUSG00000034949	protein_coding	Zfr2	ENSMUST00000144087	protein_coding		10	1	81233155	436
ENSMUSG00000028644	protein_coding	Ermap	ENSMUST00000124626	protein_coding		4	-1	119189951	724
ENSMUSG00000015478	protein_coding	Rnf5	ENSMUST00000174475	retained_intron		17	-1	34603376	850
ENSMUSG00000114860	lincRNA	Gm49291	ENSMUST00000181053	lincRNA		13	-1	48262591	2312
ENSMUSG00000015478	protein_coding	Rnf5	ENSMUST00000174045	retained_intron		17	-1	34603661	763
ENSMUSG00000114457	lincRNA	Gm36346	ENSMUST00000225626	lincRNA		13	-1	48237251	1247
ENSMUSG00000060523	protein_coding	Olfr726	ENSMUST00000217319	protein_coding	principal1	14	-1	50090931	1419
ENSMUSG00000028644	protein_coding	Ermap	ENSMUST00000141227	protein_coding		4	-1	119189996	752
ENSMUSG00000060523	protein_coding	Olfr726	ENSMUST00000215105	protein_coding	principal1	14	-1	50090931	1752
ENSMUSG00000032548	protein_coding	Slco2a1	ENSMUST00000035148	protein_coding	principal1	9	1	103008002	7122
ENSMUSG00000097622	antisense	A330033J07Rik	ENSMUST00000180921	antisense		13	-1	48262623	2816
ENSMUSG00000060523	protein_coding	Olfr726	ENSMUST00000217422	protein_coding	principal1	14	-1	50090938	1302
ENSMUSG00000037287	protein_coding	Tbcel	ENSMUST00000125995	protein_coding	principal1	9	-1	42457599	4849
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000110907	protein_coding	alternative1	2	-1	116065839	3718
ENSMUSG00000028644	protein_coding	Ermap	ENSMUST00000150864	protein_coding		4	-1	119189993	629
ENSMUSG00000032548	protein_coding	Slco2a1	ENSMUST00000190892	retained_intron		9	1	103008154	3754
ENSMUSG00000063870	protein_coding	Chd4	ENSMUST00000112392	protein_coding	alternative2	6	1	125095981	6652
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000110908	protein_coding	alternative1	2	-1	116065839	3697
ENSMUSG00000060523	protein_coding	Olfr726	ENSMUST00000215278	protein_coding	principal1	14	-1	50090950	1324
ENSMUSG00000073043	protein_coding	Atoh1	ENSMUST00000101351	protein_coding	principal1	6	1	64729125	2121
ENSMUSG00000024736	protein_coding	Tmem132a	ENSMUST00000025645	protein_coding	principal1	19	-1	10869940	3657
ENSMUSG00000028644	protein_coding	Ermap	ENSMUST00000156746	protein_coding		4	-1	119190011	637
ENSMUSG00000060523	protein_coding	Olfr726	ENSMUST00000206834	protein_coding	principal1	14	-1	50090953	1256
ENSMUSG00000037287	protein_coding	Tbcel	ENSMUST00000066148	protein_coding	principal1	9	-1	42472258	5000
ENSMUSG00000060523	protein_coding	Olfr726	ENSMUST00000213345	protein_coding	principal1	14	-1	50090953	1728
ENSMUSG00000060523	protein_coding	Olfr726	ENSMUST00000217025	protein_coding	principal1	14	-1	50090953	1363
ENSMUSG00000107424	processed_pseudogene	Gm18839	ENSMUST00000204292	processed_pseudogene		6	-1	64879128	670
ENSMUSG00000024736	protein_coding	Tmem132a	ENSMUST00000120524	protein_coding		19	-1	10869778	3895
ENSMUSG00000032548	protein_coding	Slco2a1	ENSMUST00000188664	nonsense_mediated_decay		9	1	103008499	2196
ENSMUSG00000024736	protein_coding	Tmem132a	ENSMUST00000235186	retained_intron		19	-1	10860508	1371
ENSMUSG00000060523	protein_coding	Olfr726	ENSMUST00000072370	protein_coding	principal1	14	-1	50084679	966
ENSMUSG00000024736	protein_coding	Tmem132a	ENSMUST00000238070	protein_coding		19	-1	10867138	385
ENSMUSG00000110765	antisense	Gm47468	ENSMUST00000215971	antisense		9	-1	103085537	614
ENSMUSG00000110765	antisense	Gm47468	ENSMUST00000216778	antisense		9	-1	103085526	417
ENSMUSG00000024737	protein_coding	Slc15a3	ENSMUST00000138380	processed_transcript		19	1	10839727	414
ENSMUSG00000037287	protein_coding	Tbcel	ENSMUST00000066179	protein_coding		9	-1	42461461	3893
ENSMUSG00000073012	protein_coding	Fnd3c2	ENSMUST00000091282	protein_coding	principal1	X	-1	106255376	3662
ENSMUSG00000087675	processed_transcript	Gm11762	ENSMUST00000135630	processed_transcript		11	1	119548630	1705
ENSMUSG00000067653	protein_coding	Ankrd23	ENSMUST00000193083	protein_coding		1	-1	36536521	2277
ENSMUSG00000028644	protein_coding	Ermap	ENSMUST00000138395	protein_coding	principal2	4	-1	119190011	4550
ENSMUSG00000105357	processed_pseudogene	Gm42647	ENSMUST00000195939	processed_pseudogene		3	1	149210271	459
ENSMUSG00000037287	protein_coding	Tbcel	ENSMUST00000142775	processed_transcript		9	-1	42428238	2327
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000110906	protein_coding	alternative1	2	-1	116064721	3229
ENSMUSG00000037287	protein_coding	Tbcel	ENSMUST00000138506	protein_coding	principal1	9	-1	42472265	1534
ENSMUSG00000037287	protein_coding	Tbcel	ENSMUST00000128959	protein_coding	principal1	9	-1	42472218	1535
ENSMUSG00000063870	protein_coding	Chd4	ENSMUST00000056889	protein_coding	principal2	6	1	125095981	6697
ENSMUSG00000058057	protein_coding	Mettl7a3	ENSMUST00000075420	protein_coding	principal1	15	1	100334929	1652
ENSMUSG00000022589	protein_coding	Cyp11b2	ENSMUST00000238900	protein_coding	alternative2	15	-1	74856318	1625
ENSMUSG00000022589	protein_coding	Cyp11b2	ENSMUST00000167634	protein_coding	principal2	15	-1	74856318	1625
ENSMUSG00000090165	protein_coding	Ugt1a10	ENSMUST00000138182	protein_coding		1	1	88055388	717
ENSMUSG00000037287	protein_coding	Tbcel	ENSMUST00000134374	protein_coding		9	-1	42507809	326
ENSMUSG00000079626	protein_coding	Rhox7b	ENSMUST00000115156	protein_coding	principal1	X	-1	37897232	1091
ENSMUSG00000037287	protein_coding	Tbcel	ENSMUST00000213428	retained_intron		9	-1	42472239	3149
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000074285	protein_coding	alternative1	2	-1	116064512	2844
ENSMUSG00000063870	protein_coding	Chd4	ENSMUST00000112390	protein_coding	alternative2	6	1	125096162	6537
ENSMUSG00000063522	protein_coding	Ly6m	ENSMUST00000190826	processed_transcript		15	-1	74897021	3211
ENSMUSG00000063870	protein_coding	Chd4	ENSMUST00000155932	retained_intron		6	1	125096177	369
ENSMUSG00000090165	protein_coding	Ugt1a10	ENSMUST00000113142	protein_coding	principal1	1	1	88055411	2244
ENSMUSG00000063870	protein_coding	Chd4	ENSMUST00000155261	protein_coding		6	1	125096569	750
ENSMUSG00000052131	protein_coding	Akr1b7	ENSMUST00000007449	protein_coding	principal1	6	1	34412334	1281
ENSMUSG00000024737	protein_coding	Slc15a3	ENSMUST00000025646	protein_coding	principal1	19	1	10842544	2345
ENSMUSG00000034949	protein_coding	Zfr2	ENSMUST00000117798	protein_coding	principal1	10	1	81233155	3349
ENSMUSG00000079471	protein_coding	Mymx	ENSMUST00000178858	protein_coding	alternative2	17	-1	45602067	804
ENSMUSG00000090165	protein_coding	Ugt1a10	ENSMUST00000173325	protein_coding		1	1	88055481	631
ENSMUSG00000031765	protein_coding	Mt1	ENSMUST00000034215	protein_coding	principal1	8	1	94179082	549
ENSMUSG00000064137	protein_coding	Rhox8	ENSMUST00000071885	protein_coding	principal1	X	-1	37878944	1204
ENSMUSG00000024737	protein_coding	Slc15a3	ENSMUST00000131010	processed_transcript		19	1	10842550	361
ENSMUSG00000063522	protein_coding	Ly6m	ENSMUST00000077004	protein_coding	principal1	15	-1	74881704	1884
ENSMUSG00000084965	transcribed_processed_pseudogene	Gm13857	ENSMUST00000150561	processed_transcript		6	-1	34445435	2337
ENSMUSG00000081984	protein_coding	Dnajb3	ENSMUST00000119972	protein_coding	principal1	1	-1	88205782	1051
ENSMUSG00000084965	transcribed_processed_pseudogene	Gm13857	ENSMUST00000155560	processed_transcript		6	-1	34443114	634
ENSMUSG00000037224	protein_coding	Zfyve28	ENSMUST00000094868	protein_coding	principal1	5	-1	34288326	3983
ENSMUSG00000024737	protein_coding	Slc15a3	ENSMUST00000138263	retained_intron		19	1	10842895	4868
ENSMUSG00000031765	protein_coding	Mt1	ENSMUST00000212291	protein_coding		8	1	94179211	633
ENSMUSG00000063870	protein_coding	Chd4	ENSMUST00000138968	retained_intron		6	1	125113541	618
ENSMUSG00000034949	protein_coding	Zfr2	ENSMUST00000127526	processed_transcript		10	1	81233176	435
ENSMUSG00000118621	unprocessed_pseudogene	AC087801.3	ENSMUST00000239263	unprocessed_pseudogene		1	1	88178301	90
ENSMUSG00000084965	transcribed_processed_pseudogene	Gm13857	ENSMUST00000139645	transcribed_processed_pseudogene		6	-1	34443255	173
ENSMUSG00000118027	antisense	Gm10802	ENSMUST00000235514	antisense		19	-1	10841762	1600
ENSMUSG00000082837	unprocessed_pseudogene	Gm15373	ENSMUST00000121495	unprocessed_pseudogene		1	1	88097918	214
ENSMUSG00000084965	transcribed_processed_pseudogene	Gm13857	ENSMUST00000141091	processed_transcript		6	-1	34445436	617
ENSMUSG00000031765	protein_coding	Mt1	ENSMUST00000211807	protein_coding		8	1	94179241	1085
ENSMUSG00000110524	lincRNA	Gm39228	ENSMUST00000212456	lincRNA		8	1	94183289	301
ENSMUSG00000037224	protein_coding	Zfyve28	ENSMUST00000132104	retained_intron		5	-1	34232556	666
ENSMUSG00000079471	protein_coding	Mymx	ENSMUST00000169137	protein_coding	principal4	17	-1	45601966	616
ENSMUSG00000063870	protein_coding	Chd4	ENSMUST00000124317	protein_coding		6	1	125113569	1332
ENSMUSG00000093550	protein_coding	Higd1c	ENSMUST00000175683	protein_coding	principal1	15	1	100364542	507
ENSMUSG00000037224	protein_coding	Zfyve28	ENSMUST00000130435	processed_transcript		5	-1	34233018	650
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000120995	processed_transcript		2	-1	115872943	1022
ENSMUSG00000034949	protein_coding	Zfr2	ENSMUST00000128182	retained_intron		10	1	81233176	2871
ENSMUSG00000063870	protein_coding	Chd4	ENSMUST00000132794	retained_intron		6	1	125119767	821
ENSMUSG00000090152	processed_pseudogene	Gm16285	ENSMUST00000162999	processed_pseudogene		12	1	101646186	347
ENSMUSG00000079471	protein_coding	Mymx	ENSMUST00000113529	protein_coding	alternative2	17	-1	45602102	442
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000189640	retained_intron		2	-1	115868867	521
ENSMUSG00000067653	protein_coding	Ankrd23	ENSMUST00000054665	protein_coding	principal1	1	-1	36535739	1964
ENSMUSG00000026322	protein_coding	Htr4	ENSMUST00000027560	protein_coding	principal2	18	1	62324204	4661
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000151279	processed_transcript		2	-1	116042046	837
ENSMUSG00000079471	protein_coding	Mymx	ENSMUST00000208801	protein_coding	alternative2	17	-1	45601970	437
ENSMUSG00000067653	protein_coding	Ankrd23	ENSMUST00000194853	protein_coding		1	-1	36535739	1073
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000177493	processed_transcript		2	-1	115872854	424
ENSMUSG00000067653	protein_coding	Ankrd23	ENSMUST00000193991	processed_transcript		1	-1	36536883	663
ENSMUSG00000026322	protein_coding	Htr4	ENSMUST00000237114	protein_coding		18	1	62341011	1389
ENSMUSG00000037224	protein_coding	Zfyve28	ENSMUST00000114370	retained_intron		5	-1	34243559	1499
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000149217	processed_transcript		2	-1	115872943	393
ENSMUSG00000093550	protein_coding	Higd1c	ENSMUST00000177211	protein_coding	principal1	15	1	100364545	555
ENSMUSG00000026322	protein_coding	Htr4	ENSMUST00000238081	protein_coding	alternative1	18	1	62341050	1203
ENSMUSG00000037224	protein_coding	Zfyve28	ENSMUST00000114369	processed_transcript		5	-1	34288449	1086
ENSMUSG00000034949	protein_coding	Zfr2	ENSMUST00000132174	retained_intron		10	1	81233187	4525
ENSMUSG00000026322	protein_coding	Htr4	ENSMUST00000236691	protein_coding		18	1	62341050	1267
ENSMUSG00000094877	TR_V_gene	Trav3n-3	ENSMUST00000197557	TR_V_gene		14	1	53283585	427
ENSMUSG00000037224	protein_coding	Zfyve28	ENSMUST00000114368	protein_coding		5	-1	34288437	712
ENSMUSG00000094877	TR_V_gene	Trav3n-3	ENSMUST00000103625	TR_V_gene	principal1	14	1	53283896	276
ENSMUSG00000034949	protein_coding	Zfr2	ENSMUST00000137999	protein_coding		10	1	81248416	877
ENSMUSG00000103053	TEC	Gm38271	ENSMUST00000192296	TEC		3	1	106589260	1603
ENSMUSG00000027075	protein_coding	Slc43a1	ENSMUST00000121114	protein_coding	alternative2	2	1	84838850	3089
ENSMUSG00000079610	protein_coding	Ankrd39	ENSMUST00000207843	nonsense_mediated_decay		1	-1	36547219	2646
ENSMUSG00000034949	protein_coding	Zfr2	ENSMUST00000148029	retained_intron		10	1	81249051	986
ENSMUSG00000076435	protein_coding	Acsf2	ENSMUST00000103164	protein_coding	principal1	11	-1	94601871	3154
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000118654	retained_intron		2	-1	115872962	2371
ENSMUSG00000027075	protein_coding	Slc43a1	ENSMUST00000146816	protein_coding		2	1	84839395	539
ENSMUSG00000030276	protein_coding	Ttll3	ENSMUST00000204026	protein_coding		6	1	113389260	1472
ENSMUSG00000086291	sense_intronic	Gm15513	ENSMUST00000140646	sense_intronic		5	-1	34213802	1569
ENSMUSG00000028277	protein_coding	Ube2j1	ENSMUST00000124992	protein_coding	principal1	4	1	33031416	3530
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000150477	processed_transcript		2	-1	115872946	370
ENSMUSG00000103873	IG_V_pseudogene	Ighv1-38	ENSMUST00000192755	IG_V_pseudogene		12	-1	114910443	349
ENSMUSG00000086395	antisense	A630014C17Rik	ENSMUST00000150973	antisense		11	1	52276055	2984
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000154671	processed_transcript		2	-1	116049680	356
ENSMUSG00000076435	protein_coding	Acsf2	ENSMUST00000144615	processed_transcript		11	-1	94570778	337
ENSMUSG00000005897	protein_coding	Nr2c1	ENSMUST00000105290	protein_coding	principal1	10	1	94148023	3732
ENSMUSG00000082864	processed_pseudogene	Gm13358	ENSMUST00000121427	processed_pseudogene		2	1	26558625	569
ENSMUSG00000028277	protein_coding	Ube2j1	ENSMUST00000135924	protein_coding		4	1	33036728	3190
ENSMUSG00000076435	protein_coding	Acsf2	ENSMUST00000131808	processed_transcript		11	-1	94563897	596
ENSMUSG00000030276	protein_coding	Ttll3	ENSMUST00000204683	processed_transcript		6	1	113390737	782
ENSMUSG00000076435	protein_coding	Acsf2	ENSMUST00000155122	processed_transcript		11	-1	94601769	928
ENSMUSG00000044835	protein_coding	Ankrd45	ENSMUST00000125018	protein_coding		1	1	161142691	673
ENSMUSG00000005897	protein_coding	Nr2c1	ENSMUST00000092213	protein_coding	principal1	10	1	94148419	2376
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000140461	retained_intron		2	-1	116062360	5498
ENSMUSG00000094231	TR_V_gene	Trav9n-4	ENSMUST00000103626	TR_V_gene	principal1	14	1	53294341	595
ENSMUSG00000095130	IG_V_gene	Ighv1-39	ENSMUST00000103515	IG_V_gene	principal1	12	-1	114915032	351
ENSMUSG00000027075	protein_coding	Slc43a1	ENSMUST00000145004	retained_intron		2	1	84839417	3927
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000135543	retained_intron		2	-1	116049212	503
ENSMUSG00000005897	protein_coding	Nr2c1	ENSMUST00000099343	protein_coding	principal1	10	1	94156286	2413
ENSMUSG00000028277	protein_coding	Ube2j1	ENSMUST00000029944	protein_coding		4	1	33031528	662
ENSMUSG00000090103	antisense	Gm16094	ENSMUST00000162784	antisense		1	1	85599286	427
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000134314	processed_transcript		2	-1	116062530	640
ENSMUSG00000093789	protein_coding	Methig1	ENSMUST00000075675	protein_coding	principal1	15	1	100353149	1501
ENSMUSG00000046169	protein_coding	Adamts6	ENSMUST00000224784	nonsense_mediated_decay		13	1	104287835	7690
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000133990	processed_transcript		2	-1	116064468	804
ENSMUSG00000027210	protein_coding	Meis2	ENSMUST00000138526	retained_intron		2	-1	116058842	304
ENSMUSG00000093789	protein_coding	Methig1	ENSMUST00000175929	nonsense_mediated_decay		15	1	100353166	788
ENSMUSG00000046169	protein_coding	Adamts6	ENSMUST00000223562	nonsense_mediated_decay		13	1	104287871	3840
ENSMUSG00000028351	protein_coding	Brinp1	ENSMUST00000030036	protein_coding	principal1	4	-1	68954397	3212
ENSMUSG00000103562	TEC	2810405F15Rik	ENSMUST00000195368	TEC		2	-1	116076096	932
ENSMUSG00000101146	protein_coding	Gm20814	ENSMUST00000190173	protein_coding	principal1	Y	1	75195856	922
ENSMUSG00000027075	protein_coding	Slc43a1	ENSMUST00000111624	protein_coding	alternative2	2	1	84840199	2556
ENSMUSG00000079610	protein_coding	Ankrd39	ENSMUST00000001172	protein_coding	principal1	1	-1	36547445	2109
ENSMUSG00000099499	unprocessed_pseudogene	Gm28787	ENSMUST00000188357	unprocessed_pseudogene		Y	-1	75283000	696
ENSMUSG00000028351	protein_coding	Brinp1	ENSMUST00000156773	processed_transcript		4	-1	68841407	3438
ENSMUSG00000101213	processed_pseudogene	Gm28788	ENSMUST00000189717	processed_pseudogene		Y	-1	75319623	375
ENSMUSG00000056487	protein_coding	Mettl7a2	ENSMUST00000088142	protein_coding	principal2	15	1	100353200	1800
ENSMUSG00000028351	protein_coding	Brinp1	ENSMUST00000140572	processed_transcript		4	-1	68829358	414
ENSMUSG00000086308	lincRNA	G630016G05Rik	ENSMUST00000152412	lincRNA		2	1	116067225	796
ENSMUSG00000044835	protein_coding	Ankrd45	ENSMUST00000111608	protein_coding	alternative2	1	1	161142712	3714
ENSMUSG00000079610	protein_coding	Ankrd39	ENSMUST00000194894	protein_coding		1	-1	36547231	664
ENSMUSG00000073731	antisense	AI507597	ENSMUST00000144017	antisense		4	1	141614026	820
ENSMUSG00000107783	processed_pseudogene	Gm44038	ENSMUST00000203952	processed_pseudogene		6	1	64978515	889
ENSMUSG00000056487	protein_coding	Mettl7a2	ENSMUST00000176287	protein_coding	alternative2	15	1	100353200	1800
ENSMUSG00000042745	protein_coding	Id1	ENSMUST00000038368	protein_coding	principal2	2	1	152736251	934
ENSMUSG00000079610	protein_coding	Ankrd39	ENSMUST00000207922	retained_intron		1	-1	36542230	438
ENSMUSG00000073731	antisense	AI507597	ENSMUST00000140726	antisense		4	1	141614354	880
ENSMUSG00000082553	processed_pseudogene	Gm11404	ENSMUST00000120872	processed_pseudogene		4	-1	69295121	494
ENSMUSG00000079610	protein_coding	Ankrd39	ENSMUST00000208690	processed_transcript		1	-1	36547219	640
ENSMUSG00000086308	lincRNA	G630016G05Rik	ENSMUST00000156095	lincRNA		2	1	116067968	3398
ENSMUSG00000079610	protein_coding	Ankrd39	ENSMUST00000208269	retained_intron		1	-1	36547219	1889
ENSMUSG00000027075	protein_coding	Slc43a1	ENSMUST00000111625	protein_coding	principal4	2	1	84840625	2487
ENSMUSG00000086176	processed_pseudogene	Gm15534	ENSMUST00000137642	processed_pseudogene		6	1	64990947	562
ENSMUSG00000082998	processed_pseudogene	Gm11221	ENSMUST00000117230	processed_pseudogene		4	1	69691978	597
ENSMUSG00000044835	protein_coding	Ankrd45	ENSMUST00000192384	nonsense_mediated_decay		1	1	161142723	523
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000168787	protein_coding	principal1	17	-1	30576488	7058
ENSMUSG00000042745	protein_coding	Id1	ENSMUST00000109824	protein_coding	alternative2	2	1	152736251	1160
ENSMUSG00000102461	TEC	Gm37166	ENSMUST00000195473	TEC		9	1	103120368	2474
ENSMUSG00000060057	protein_coding	Olfr193	ENSMUST00000208455	protein_coding	principal1	16	-1	59111881	2855
ENSMUSG00000085627	processed_pseudogene	Gm11222	ENSMUST00000119005	processed_pseudogene		4	1	69853947	738
ENSMUSG00000044835	protein_coding	Ankrd45	ENSMUST00000150721	nonsense_mediated_decay		1	1	161142740	546
ENSMUSG00000046169	protein_coding	Adamts6	ENSMUST00000224742	nonsense_mediated_decay		13	1	104287975	4901
ENSMUSG00000044835	protein_coding	Ankrd45	ENSMUST00000052245	protein_coding	principal2	1	1	161142767	849
ENSMUSG00000093969	TR_V_gene	Trav4n-4	ENSMUST00000103627	TR_V_gene	principal1	14	1	53302036	354
ENSMUSG00000060057	protein_coding	Olfr193	ENSMUST00000076262	protein_coding	principal1	16	-1	59110633	1009
ENSMUSG00000028333	protein_coding	Anp32b	ENSMUST00000102926	protein_coding	principal1	4	1	46450902	1716
ENSMUSG00000109510	protein_coding	Gm42417	ENSMUST00000191849	protein_coding	principal1	1	-1	36539358	2256
ENSMUSG00000049160	protein_coding	Tex50	ENSMUST00000135643	protein_coding	principal1	1	-1	161159314	1192
ENSMUSG00000035582	protein_coding	Gdpd4	ENSMUST00000041860	protein_coding	principal1	7	1	97919955	3053
ENSMUSG00000027075	protein_coding	Slc43a1	ENSMUST00000028469	protein_coding	alternative2	2	1	84839408	2539
ENSMUSG00000049160	protein_coding	Tex50	ENSMUST00000178511	protein_coding	principal1	1	-1	161159314	954
ENSMUSG00000109510	protein_coding	Gm42417	ENSMUST00000207088	nonsense_mediated_decay		1	-1	36539429	284
ENSMUSG00000082318	processed_pseudogene	Gm14162	ENSMUST00000121985	processed_pseudogene		2	1	152745707	601
ENSMUSG00000097326	lincRNA	A330048O09Rik	ENSMUST00000180777	lincRNA		13	-1	48273884	672
ENSMUSG00000035582	protein_coding	Gdpd4	ENSMUST00000170049	protein_coding	principal1	7	1	97957821	1899
ENSMUSG00000060057	protein_coding	Olfr193	ENSMUST00000207935	protein_coding		16	-1	59111872	580
ENSMUSG00000098985	processed_pseudogene	Gm27219	ENSMUST00000184633	processed_pseudogene		9	-1	36813874	742
ENSMUSG00000112163	processed_pseudogene	Gm8188	ENSMUST00000219737	processed_pseudogene		10	1	82430704	1690
ENSMUSG00000032549	protein_coding	Rab6b	ENSMUST00000189134	protein_coding		9	1	103111787	716
ENSMUSG00000112100	processed_pseudogene	Gm9102	ENSMUST00000219250	processed_pseudogene		10	1	125512531	465
ENSMUSG00000112070	processed_pseudogene	Gm47809	ENSMUST00000220078	processed_pseudogene		10	1	82442617	325
ENSMUSG00000102991	IG_V_pseudogene	Ighv1-40	ENSMUST00000194231	IG_V_pseudogene		12	-1	114925368	345
ENSMUSG00000109344	protein_coding	A26c2	ENSMUST00000207359	protein_coding	principal1	7	-1	62823673	997
ENSMUSG00000033196	protein_coding	Myh2	ENSMUST00000018641	protein_coding	principal1	11	1	67171220	6018
ENSMUSG00000096168	TR_V_gene	Trav5n-4	ENSMUST00000179997	TR_V_gene	principal1	14	1	53312904	343
ENSMUSG00000063020	protein_coding	Olfr194	ENSMUST00000213228	protein_coding	principal1	16	-1	59121058	3668
ENSMUSG00000109289	processed_pseudogene	Gm32111	ENSMUST00000207689	processed_pseudogene		7	1	62782245	846
ENSMUSG00000068706	processed_pseudogene	Gm10250	ENSMUST00000090488	processed_pseudogene		15	-1	5121135	482
ENSMUSG00000102535	IG_V_pseudogene	Ighv1-41	ENSMUST00000194414	IG_V_pseudogene		12	-1	114932782	329
ENSMUSG00000063020	protein_coding	Olfr194	ENSMUST00000216519	protein_coding	principal1	16	-1	59121069	3705
ENSMUSG00000043085	protein_coding	Tmem82	ENSMUST00000143154	nonsense_mediated_decay		4	-1	141618633	2898
ENSMUSG00000063020	protein_coding	Olfr194	ENSMUST00000072608	protein_coding	principal1	16	-1	59120068	921
ENSMUSG00000116879	lincRNA	Gm49794	ENSMUST00000232133	lincRNA		17	1	27354111	13039
ENSMUSG00000102780	TEC	Gm38253	ENSMUST00000194058	TEC		3	1	106725599	4678
ENSMUSG00000116692	lincRNA	Gm49795	ENSMUST00000231851	lincRNA		17	-1	27354668	733
ENSMUSG00000096010	protein_coding	H4f16	ENSMUST00000179285	protein_coding	principal1	6	-1	136804415	2863
ENSMUSG00000046169	protein_coding	Adamts6	ENSMUST00000224208	protein_coding	principal1	13	1	104294490	6480
ENSMUSG00000025001	protein_coding	Hells	ENSMUST00000025965	protein_coding	principal1	19	1	38930915	5868
ENSMUSG00000043085	protein_coding	Tmem82	ENSMUST00000053263	protein_coding	principal1	4	-1	141618238	1671
ENSMUSG00000054150	protein_coding	Syne3	ENSMUST00000067005	protein_coding	alternative2	12	-1	105009809	5097
ENSMUSG00000046169	protein_coding	Adamts6	ENSMUST00000224303	nonsense_mediated_decay		13	1	104294710	4672
ENSMUSG00000025001	protein_coding	Hells	ENSMUST00000138292	retained_intron		19	1	38931030	693
ENSMUSG00000046169	protein_coding	Adamts6	ENSMUST00000224504	nonsense_mediated_decay		13	1	104307347	745
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000235187	processed_transcript		17	-1	30292332	3480
ENSMUSG00000116970	lincRNA	Gm49796	ENSMUST00000232032	lincRNA		17	1	27398147	1075
ENSMUSG00000107489	processed_pseudogene	Gm18325	ENSMUST00000203228	processed_pseudogene		6	-1	115159931	835
ENSMUSG00000025001	protein_coding	Hells	ENSMUST00000145051	protein_coding		19	1	38931174	689
ENSMUSG00000081801	processed_pseudogene	Dnmt3l-ps1	ENSMUST00000118734	processed_pseudogene		2	-1	83745736	1253
ENSMUSG00000046169	protein_coding	Adamts6	ENSMUST00000065766	protein_coding	principal1	13	1	104287873	4822
ENSMUSG00000025001	protein_coding	Hells	ENSMUST00000155465	processed_transcript		19	1	38931390	190
ENSMUSG00000062608	protein_coding	Olfr195	ENSMUST00000216957	protein_coding	principal1	16	1	59147046	2077
ENSMUSG00000025001	protein_coding	Hells	ENSMUST00000128949	retained_intron		19	1	38934508	1128
ENSMUSG00000100774	processed_pseudogene	Gm7329	ENSMUST00000185915	processed_pseudogene		1	1	65095227	210
ENSMUSG00000043085	protein_coding	Tmem82	ENSMUST00000156246	retained_intron		4	-1	141617981	2478
ENSMUSG00000025001	protein_coding	Hells	ENSMUST00000127968	processed_transcript		19	1	38943689	868
ENSMUSG00000032549	protein_coding	Rab6b	ENSMUST00000035155	protein_coding	principal1	9	1	103111807	5007
ENSMUSG00000062608	protein_coding	Olfr195	ENSMUST00000075381	protein_coding	principal1	16	1	59148829	995
ENSMUSG00000033196	protein_coding	Myh2	ENSMUST00000170159	protein_coding	principal1	11	1	67171027	6083
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000079924	protein_coding	principal1	17	-1	30576169	2007
ENSMUSG00000030276	protein_coding	Ttll3	ENSMUST00000032414	protein_coding	principal2	6	1	113392458	3168
ENSMUSG00000097766	bidirectional_promoter_lncRNA	5730420D15Rik	ENSMUST00000181781	bidirectional_promoter_lncRNA		10	1	95417375	1182
ENSMUSG00000087107	processed_transcript	AI662270	ENSMUST00000145461	lincRNA		11	1	83223576	592
ENSMUSG00000023232	protein_coding	Serinc2	ENSMUST00000122374	protein_coding	alternative2	4	-1	130275218	1881
ENSMUSG00000087107	processed_transcript	AI662270	ENSMUST00000216842	retained_intron		11	1	83223576	2577
ENSMUSG00000054150	protein_coding	Syne3	ENSMUST00000095439	protein_coding	principal4	12	-1	104998677	3357
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000237037	protein_coding		17	-1	30576449	2079
ENSMUSG00000085479	antisense	9430073C21Rik	ENSMUST00000145346	antisense		11	-1	67199234	2173
ENSMUSG00000031482	protein_coding	Slc25a15	ENSMUST00000033871	protein_coding	principal1	8	-1	22398597	3430
ENSMUSG00000087107	processed_transcript	AI662270	ENSMUST00000143673	lincRNA		11	1	83223576	1428
ENSMUSG00000114787	lincRNA	4930455M05Rik	ENSMUST00000225307	lincRNA		13	1	59419108	3220
ENSMUSG00000030276	protein_coding	Ttll3	ENSMUST00000203524	protein_coding		6	1	113393160	2745
ENSMUSG00000000782	protein_coding	Tcf7	ENSMUST00000086844	protein_coding		11	-1	52282571	2471
ENSMUSG00000054150	protein_coding	Syne3	ENSMUST00000109927	protein_coding	alternative2	12	-1	104998677	5263
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000235587	protein_coding		17	-1	30576262	1680
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000237164	protein_coding		17	-1	30527351	1300
ENSMUSG00000114787	lincRNA	4930455M05Rik	ENSMUST00000225030	lincRNA		13	1	59419397	3503
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000098751	protein_coding		3	1	106684987	929
ENSMUSG00000114623	lincRNA	Gm34788	ENSMUST00000225485	lincRNA		13	-1	59419254	6226
ENSMUSG00000087107	processed_transcript	AI662270	ENSMUST00000142709	lincRNA		11	1	83224149	304
ENSMUSG00000114623	lincRNA	Gm34788	ENSMUST00000225137	lincRNA		13	-1	59418966	5726
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000237732	protein_coding		17	-1	30513675	429
ENSMUSG00000058287	protein_coding	Gm12253	ENSMUST00000108825	protein_coding	principal1	11	1	58432559	1356
ENSMUSG00000083161	transcribed_unprocessed_pseudogene	Gm11427	ENSMUST00000216233	processed_transcript		11	1	83224454	999
ENSMUSG00000083161	transcribed_unprocessed_pseudogene	Gm11427	ENSMUST00000214346	processed_transcript		11	1	83224486	1581
ENSMUSG00000083161	transcribed_unprocessed_pseudogene	Gm11427	ENSMUST00000117952	transcribed_unprocessed_pseudogene		11	1	83243860	1696
ENSMUSG00000083161	transcribed_unprocessed_pseudogene	Gm11427	ENSMUST00000215482	processed_transcript		11	1	83255145	1203
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000156544	processed_transcript		3	1	106684998	672
ENSMUSG00000031482	protein_coding	Slc25a15	ENSMUST00000210020	retained_intron		8	-1	22398544	4430
ENSMUSG00000000782	protein_coding	Tcf7	ENSMUST00000109071	protein_coding	principal1	11	-1	52283331	2059
ENSMUSG00000100430	lincRNA	1700095A13Rik	ENSMUST00000235874	lincRNA		18	-1	83107890	1275
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000130105	protein_coding		3	1	106721728	674
ENSMUSG00000100430	lincRNA	1700095A13Rik	ENSMUST00000237353	lincRNA		18	-1	83079841	1199
ENSMUSG00000023232	protein_coding	Serinc2	ENSMUST00000105996	protein_coding	principal3	4	-1	130275586	1878
ENSMUSG00000000782	protein_coding	Tcf7	ENSMUST00000238914	protein_coding		11	-1	52274877	813
ENSMUSG00000020312	protein_coding	Shc2	ENSMUST00000168116	retained_intron		10	-1	79622724	3720
ENSMUSG00000023232	protein_coding	Serinc2	ENSMUST00000120126	protein_coding	alternative2	4	-1	130279205	1452
ENSMUSG00000044429	protein_coding	Cryga	ENSMUST00000061497	protein_coding	principal1	1	-1	65103373	625
ENSMUSG00000100430	lincRNA	1700095A13Rik	ENSMUST00000238160	lincRNA		18	-1	83107860	1070
ENSMUSG00000009394	protein_coding	Syn2	ENSMUST00000203768	retained_intron		6	1	115134902	2386
ENSMUSG00000100430	lincRNA	1700095A13Rik	ENSMUST00000236863	lincRNA		18	-1	83107798	865
ENSMUSG00000023232	protein_coding	Serinc2	ENSMUST00000146478	protein_coding		4	-1	130275532	802
ENSMUSG00000100430	lincRNA	1700095A13Rik	ENSMUST00000235826	lincRNA		18	-1	83107871	1713
ENSMUSG00000030276	protein_coding	Ttll3	ENSMUST00000205017	nonsense_mediated_decay		6	1	113393177	1886
ENSMUSG00000023232	protein_coding	Serinc2	ENSMUST00000154846	protein_coding		4	-1	130275545	506
ENSMUSG00000044429	protein_coding	Cryga	ENSMUST00000154012	retained_intron		1	-1	65103360	717
ENSMUSG00000100430	lincRNA	1700095A13Rik	ENSMUST00000185460	lincRNA		18	-1	83107860	711
ENSMUSG00000100430	lincRNA	1700095A13Rik	ENSMUST00000236396	lincRNA		18	-1	83107871	1144
ENSMUSG00000053398	protein_coding	Phgdh	ENSMUST00000065793	protein_coding	principal1	3	-1	98339990	1893
ENSMUSG00000094186	protein_coding	Gm1553	ENSMUST00000177934	protein_coding	principal1	10	-1	82492618	658
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000139526	protein_coding	alternative2	14	-1	45219425	5045
ENSMUSG00000052642	protein_coding	Lypd9	ENSMUST00000064614	protein_coding	principal1	11	-1	58452923	549
ENSMUSG00000030276	protein_coding	Ttll3	ENSMUST00000203925	retained_intron		6	1	113397758	2517
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000127003	nonsense_mediated_decay		3	1	106721893	1989
ENSMUSG00000098199	processed_pseudogene	Gm9358	ENSMUST00000183067	processed_pseudogene		7	1	138914388	927
ENSMUSG00000107542	TEC	Gm43969	ENSMUST00000204833	TEC		6	1	136804681	535
ENSMUSG00000030276	protein_coding	Ttll3	ENSMUST00000204255	processed_transcript		6	1	113409206	396
ENSMUSG00000118094	processed_transcript	AC142100.1	ENSMUST00000236965	lincRNA		18	1	83011903	2192
ENSMUSG00000110319	processed_pseudogene	Gm45668	ENSMUST00000211271	processed_pseudogene		7	-1	138930216	493
ENSMUSG00000029121	protein_coding	Crmp1	ENSMUST00000202434	protein_coding		5	1	37241940	778
ENSMUSG00000030276	protein_coding	Ttll3	ENSMUST00000203880	processed_transcript		6	1	113412831	827
ENSMUSG00000118094	processed_transcript	AC142100.1	ENSMUST00000235415	retained_intron		18	1	83011935	422
ENSMUSG00000053398	protein_coding	Phgdh	ENSMUST00000153694	retained_intron		3	-1	98333570	735
ENSMUSG00000118094	processed_transcript	AC142100.1	ENSMUST00000236735	lincRNA		18	1	83011986	354
ENSMUSG00000118094	processed_transcript	AC142100.1	ENSMUST00000236753	lincRNA		18	1	83027082	964
ENSMUSG00000053398	protein_coding	Phgdh	ENSMUST00000152106	retained_intron		3	-1	98328613	552
ENSMUSG00000118094	processed_transcript	AC142100.1	ENSMUST00000236941	lincRNA		18	1	83046596	1661
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000022377	protein_coding	principal3	14	-1	45219394	4028
ENSMUSG00000053398	protein_coding	Phgdh	ENSMUST00000148488	protein_coding		3	-1	98337548	446
ENSMUSG00000117976	lincRNA	Gm50437	ENSMUST00000238101	lincRNA		18	-1	83021155	895
ENSMUSG00000106127	antisense	4930520M14Rik	ENSMUST00000196947	antisense		5	-1	139216356	701
ENSMUSG00000030276	protein_coding	Ttll3	ENSMUST00000038889	protein_coding	alternative2	6	1	113392497	3114
ENSMUSG00000060032	protein_coding	H2aj	ENSMUST00000074556	protein_coding	principal2	6	1	136808244	1831
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000106736	protein_coding		3	1	106721893	1669
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000123879	protein_coding	alternative2	14	-1	45220328	4069
ENSMUSG00000033644	protein_coding	Piwil2	ENSMUST00000048129	protein_coding	principal1	14	-1	70429094	4916
ENSMUSG00000060032	protein_coding	H2aj	ENSMUST00000203982	protein_coding	alternative1	6	1	136808333	577
ENSMUSG00000112942	processed_pseudogene	Gm47597	ENSMUST00000220774	processed_pseudogene		13	1	43417534	332
ENSMUSG00000112560	processed_pseudogene	Gm19186	ENSMUST00000219922	processed_pseudogene		10	1	82566772	333
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000156600	protein_coding		14	-1	45169325	842
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000154973	protein_coding		3	1	106721908	578
ENSMUSG00000059488	protein_coding	Olfr727	ENSMUST00000215317	protein_coding	principal1	14	1	50123186	2616
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000089968	protein_coding	alternative2	17	1	37001163	1991
ENSMUSG00000033644	protein_coding	Piwil2	ENSMUST00000226229	protein_coding		14	-1	70429383	962
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000122928	retained_intron		3	1	106721925	3138
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000147853	protein_coding		14	-1	45219390	2816
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000131330	retained_intron		3	1	106721926	4737
ENSMUSG00000033644	protein_coding	Piwil2	ENSMUST00000226426	protein_coding		14	-1	70429064	666
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000128484	protein_coding		14	-1	45219382	2069
ENSMUSG00000059488	protein_coding	Olfr727	ENSMUST00000079142	protein_coding	principal1	14	1	50126553	1035
ENSMUSG00000113941	processed_pseudogene	Gm35755	ENSMUST00000222392	processed_pseudogene		12	1	38089902	2077
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000106737	processed_transcript		3	1	106721926	1411
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000227333	protein_coding		14	-1	45183111	293
ENSMUSG00000070342	lincRNA	Gm10287	ENSMUST00000180599	lincRNA		3	-1	149225745	4059
ENSMUSG00000070342	lincRNA	Gm10287	ENSMUST00000093950	lincRNA		3	-1	149225745	4053
ENSMUSG00000027715	protein_coding	Ccna2	ENSMUST00000029270	protein_coding	principal1	3	-1	36572150	2965
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000143609	protein_coding		14	-1	45219397	619
ENSMUSG00000025870	protein_coding	Arl10	ENSMUST00000026988	protein_coding	principal1	13	1	54575015	1046
ENSMUSG00000050030	protein_coding	Olfr728	ENSMUST00000216423	processed_transcript		14	-1	50142661	5759
ENSMUSG00000032553	protein_coding	Srprb	ENSMUST00000035157	protein_coding	principal1	9	-1	103202137	3064
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000235342	processed_transcript		17	-1	30414775	1071
ENSMUSG00000050030	protein_coding	Olfr728	ENSMUST00000213685	protein_coding	principal1	14	-1	50142680	7087
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000237048	protein_coding	principal1	17	-1	30571846	1944
ENSMUSG00000050030	protein_coding	Olfr728	ENSMUST00000215329	processed_transcript		14	-1	50142628	5010
ENSMUSG00000050030	protein_coding	Olfr728	ENSMUST00000214046	processed_transcript		14	-1	50142680	3737
ENSMUSG00000025870	protein_coding	Arl10	ENSMUST00000156024	protein_coding		13	1	54575047	654
ENSMUSG00000027715	protein_coding	Ccna2	ENSMUST00000156575	processed_transcript		3	-1	36566845	953
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000163812	protein_coding	principal3	7	1	80294450	3026
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000235643	processed_transcript		17	-1	30413163	863
ENSMUSG00000050030	protein_coding	Olfr728	ENSMUST00000051563	protein_coding	principal1	14	-1	50140637	936
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000153383	protein_coding		14	-1	45219402	3691
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000235431	processed_transcript		17	-1	30414744	923
ENSMUSG00000025870	protein_coding	Arl10	ENSMUST00000135354	processed_transcript		13	1	54578381	353
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000237078	processed_transcript		17	-1	30414738	1207
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000236153	processed_transcript		17	-1	30491710	564
ENSMUSG00000027715	protein_coding	Ccna2	ENSMUST00000196316	protein_coding		3	-1	36571551	2001
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000236430	processed_transcript		17	-1	30513619	648
ENSMUSG00000028603	protein_coding	Scp2	ENSMUST00000030340	protein_coding	principal1	4	-1	108118532	2640
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000047558	protein_coding	alternative1	7	1	80294451	3016
ENSMUSG00000025870	protein_coding	Arl10	ENSMUST00000142246	protein_coding		13	1	54578812	556
ENSMUSG00000020312	protein_coding	Shc2	ENSMUST00000020564	protein_coding	principal1	10	-1	79637918	3243
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000226879	nonsense_mediated_decay		14	-1	45219396	2977
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000098750	protein_coding	principal1	3	1	106721936	3103
ENSMUSG00000105797	lincRNA	Gm5149	ENSMUST00000199980	lincRNA		3	1	149304829	1250
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000150648	processed_transcript		14	-1	45219364	600
ENSMUSG00000068048	protein_coding	Rhox9	ENSMUST00000170643	protein_coding		X	-1	37901704	2422
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000235555	processed_transcript		17	-1	30446140	3104
ENSMUSG00000028603	protein_coding	Scp2	ENSMUST00000145721	processed_transcript		4	-1	108047879	868
ENSMUSG00000043314	protein_coding	Olfr30	ENSMUST00000215691	protein_coding	principal1	11	-1	58462270	2404
ENSMUSG00000044816	protein_coding	D630023F18Rik	ENSMUST00000148020	protein_coding	alternative2	1	-1	65123214	1156
ENSMUSG00000021830	protein_coding	Txndc16	ENSMUST00000123118	processed_transcript		14	-1	45219390	383
ENSMUSG00000105797	lincRNA	Gm5149	ENSMUST00000199768	lincRNA		3	1	149334846	620
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000237675	processed_transcript		17	-1	30334956	357
ENSMUSG00000084024	processed_pseudogene	Gm15937	ENSMUST00000120727	processed_pseudogene		15	1	5208913	1235
ENSMUSG00000027715	protein_coding	Ccna2	ENSMUST00000147380	nonsense_mediated_decay		3	-1	36571927	1719
ENSMUSG00000020312	protein_coding	Shc2	ENSMUST00000166450	retained_intron		10	-1	79623080	969
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000150513	protein_coding		3	1	106721967	646
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000237635	processed_transcript		17	-1	30300036	245
ENSMUSG00000027715	protein_coding	Ccna2	ENSMUST00000145309	retained_intron		3	-1	36571964	856
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000235299	retained_intron		17	-1	30366070	2266
ENSMUSG00000032553	protein_coding	Srprb	ENSMUST00000163567	retained_intron		9	-1	103202129	3166
ENSMUSG00000049092	protein_coding	Gpr137c	ENSMUST00000227086	protein_coding	alternative2	14	1	45219717	4997
ENSMUSG00000056260	protein_coding	Lrif1	ENSMUST00000150888	retained_intron		3	1	106732914	720
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000236584	protein_coding		17	-1	30576209	1535
ENSMUSG00000043314	protein_coding	Olfr30	ENSMUST00000055204	protein_coding	principal1	11	-1	58455980	1066
ENSMUSG00000111977	bidirectional_promoter_lncRNA	Gm47163	ENSMUST00000219233	bidirectional_promoter_lncRNA		10	1	79637856	1665
ENSMUSG00000106515	lincRNA	Gm30382	ENSMUST00000199007	lincRNA		3	-1	149445276	1801
ENSMUSG00000049092	protein_coding	Gpr137c	ENSMUST00000147957	protein_coding	alternative2	14	1	45219719	1395
ENSMUSG00000113125	processed_pseudogene	Gm47650	ENSMUST00000222037	processed_pseudogene		12	-1	105027963	322
ENSMUSG00000028603	protein_coding	Scp2	ENSMUST00000122878	processed_transcript		4	-1	108071363	758
ENSMUSG00000044816	protein_coding	D630023F18Rik	ENSMUST00000050047	protein_coding	principal3	1	-1	65123193	2180
ENSMUSG00000095370	TR_V_gene	Trav6n-7	ENSMUST00000179607	TR_V_gene	principal1	14	1	53318798	358
ENSMUSG00000049092	protein_coding	Gpr137c	ENSMUST00000227009	protein_coding	alternative2	14	1	45219970	771
ENSMUSG00000106515	lincRNA	Gm30382	ENSMUST00000196330	lincRNA		3	-1	149323874	473
ENSMUSG00000029436	protein_coding	Mmp17	ENSMUST00000031390	protein_coding	principal1	5	1	129584169	6422
ENSMUSG00000032553	protein_coding	Srprb	ENSMUST00000190760	protein_coding		9	-1	103192312	231
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000172911	retained_intron		7	1	80294465	3143
ENSMUSG00000028603	protein_coding	Scp2	ENSMUST00000106701	protein_coding		4	-1	108071419	772
ENSMUSG00000106515	lincRNA	Gm30382	ENSMUST00000199503	lincRNA		3	-1	149445301	1858
ENSMUSG00000113995	lincRNA	Gm47648	ENSMUST00000222271	lincRNA		12	1	105021359	475
ENSMUSG00000038764	protein_coding	Ptpn3	ENSMUST00000075637	protein_coding	principal1	4	-1	57301837	6369
ENSMUSG00000044816	protein_coding	D630023F18Rik	ENSMUST00000153330	nonsense_mediated_decay		1	-1	65123114	594
ENSMUSG00000036095	protein_coding	Dgkb	ENSMUST00000222337	protein_coding		12	1	37817726	460
ENSMUSG00000082618	unprocessed_pseudogene	Gm14852	ENSMUST00000120065	unprocessed_pseudogene		X	-1	106273738	647
ENSMUSG00000029436	protein_coding	Mmp17	ENSMUST00000177802	retained_intron		5	1	129596626	646
ENSMUSG00000061898	protein_coding	Rbak	ENSMUST00000049861	protein_coding	principal1	5	-1	143180730	3335
ENSMUSG00000113722	lincRNA	Snhg10	ENSMUST00000222812	lincRNA		12	-1	105032277	527
ENSMUSG00000100846	protein_coding	Gm28845	ENSMUST00000144760	protein_coding	principal1	1	-1	65119558	733
ENSMUSG00000038764	protein_coding	Ptpn3	ENSMUST00000123664	processed_transcript		4	-1	57222054	480
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000237013	processed_transcript		17	-1	30576169	1287
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000236233	processed_transcript		17	-1	30576197	1307
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000146430	protein_coding	principal3	5	-1	36574325	4582
ENSMUSG00000113722	lincRNA	Snhg10	ENSMUST00000222672	lincRNA		12	-1	105032279	381
ENSMUSG00000038764	protein_coding	Ptpn3	ENSMUST00000153926	protein_coding		4	-1	57300375	800
ENSMUSG00000068048	protein_coding	Rhox9	ENSMUST00000089062	protein_coding	principal1	X	-1	37901770	882
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000237825	processed_transcript		17	-1	30524903	4856
ENSMUSG00000104785	lincRNA	Gm31121	ENSMUST00000197948	lincRNA		3	-1	149660396	1413
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000236799	protein_coding		17	-1	30571830	1272
ENSMUSG00000112261	lincRNA	Gm47599	ENSMUST00000219379	lincRNA		10	-1	95461224	660
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000172527	protein_coding		17	1	37002482	425
ENSMUSG00000112725	processed_pseudogene	Gm47600	ENSMUST00000220014	processed_pseudogene		10	-1	95454966	295
ENSMUSG00000109052	antisense	Gm45012	ENSMUST00000208323	antisense		7	1	99202366	1666
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000236910	retained_intron		17	-1	30576259	1375
ENSMUSG00000047676	processed_pseudogene	Rpsa-ps10	ENSMUST00000057740	processed_pseudogene		3	-1	150073542	885
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000136189	protein_coding		5	-1	36581803	4436
ENSMUSG00000038764	protein_coding	Ptpn3	ENSMUST00000150445	processed_transcript		4	-1	57300915	763
ENSMUSG00000049092	protein_coding	Gpr137c	ENSMUST00000146150	protein_coding	principal2	14	1	45219993	3917
ENSMUSG00000112450	processed_pseudogene	Gm3619	ENSMUST00000219947	processed_pseudogene		10	-1	95478117	775
ENSMUSG00000061898	protein_coding	Rbak	ENSMUST00000165318	protein_coding	principal1	5	-1	143180775	3480
ENSMUSG00000028772	protein_coding	Zcchc17	ENSMUST00000134159	protein_coding	principal1	4	-1	130359943	2113
ENSMUSG00000081289	processed_pseudogene	Gm14857	ENSMUST00000117862	processed_pseudogene		X	-1	106285096	3185
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000031094	protein_coding	principal3	5	-1	36582397	4590
ENSMUSG00000038764	protein_coding	Ptpn3	ENSMUST00000130900	protein_coding		4	-1	57301507	372
ENSMUSG00000062202	protein_coding	Btbd9	ENSMUST00000236825	protein_coding		17	-1	30576210	581
ENSMUSG00000028603	protein_coding	Scp2	ENSMUST00000135379	processed_transcript		4	-1	108118476	809
ENSMUSG00000028772	protein_coding	Zcchc17	ENSMUST00000141615	processed_transcript		4	-1	130318739	762
ENSMUSG00000049092	protein_coding	Gpr137c	ENSMUST00000227056	protein_coding		14	1	45220017	509
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000069250	protein_coding	principal3	17	1	37002525	1749
ENSMUSG00000038764	protein_coding	Ptpn3	ENSMUST00000151964	protein_coding		4	-1	57300756	397
ENSMUSG00000028603	protein_coding	Scp2	ENSMUST00000149106	protein_coding		4	-1	108118504	750
ENSMUSG00000118119	antisense	Gm9937	ENSMUST00000235890	antisense		17	-1	30875284	1293
ENSMUSG00000049092	protein_coding	Gpr137c	ENSMUST00000226915	protein_coding		14	1	45220171	735
ENSMUSG00000061898	protein_coding	Rbak	ENSMUST00000166382	retained_intron		5	-1	143176734	3238
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000174747	protein_coding		17	1	37002554	375
ENSMUSG00000010290	protein_coding	AI597479	ENSMUST00000010434	protein_coding	principal1	1	1	43098710	3458
ENSMUSG00000061898	protein_coding	Rbak	ENSMUST00000199880	retained_intron		5	-1	143180732	761
ENSMUSG00000049092	protein_coding	Gpr137c	ENSMUST00000151749	nonsense_mediated_decay		14	1	45265326	683
ENSMUSG00000028772	protein_coding	Zcchc17	ENSMUST00000149755	processed_transcript		4	-1	130344859	708
ENSMUSG00000085654	lincRNA	Gm12536	ENSMUST00000129102	lincRNA		4	1	57300096	358
ENSMUSG00000028772	protein_coding	Zcchc17	ENSMUST00000129840	processed_transcript		4	-1	130338584	286
ENSMUSG00000115373	sense_intronic	Gm49194	ENSMUST00000227166	sense_intronic		14	1	45273250	1474
ENSMUSG00000021187	protein_coding	Tc2n	ENSMUST00000162735	protein_coding	principal1	12	-1	101718523	5290
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000174016	retained_intron		17	1	37002569	590
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000126077	protein_coding	alternative1	5	-1	36531602	4085
ENSMUSG00000028772	protein_coding	Zcchc17	ENSMUST00000167964	retained_intron		4	-1	130359916	2130
ENSMUSG00000082463	processed_pseudogene	Gm15765	ENSMUST00000118407	processed_pseudogene		14	1	45211523	910
ENSMUSG00000052396	protein_coding	Mogat2	ENSMUST00000064231	protein_coding	principal1	7	-1	99238619	1780
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000140607	protein_coding	principal3	5	-1	36581792	4649
ENSMUSG00000073752	antisense	Gm10570	ENSMUST00000238352	antisense		4	-1	130308673	2118
ENSMUSG00000073752	antisense	Gm10570	ENSMUST00000097865	antisense		4	-1	130308674	513
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000174199	protein_coding		7	1	80294473	2128
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000174470	retained_intron		17	1	37002577	608
ENSMUSG00000021187	protein_coding	Tc2n	ENSMUST00000110047	nonsense_mediated_decay		12	-1	101711905	2587
ENSMUSG00000028603	protein_coding	Scp2	ENSMUST00000123792	processed_transcript		4	-1	108118395	855
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000173757	nonsense_mediated_decay		5	-1	36507662	838
ENSMUSG00000021187	protein_coding	Tc2n	ENSMUST00000160715	protein_coding		12	-1	101709536	1386
ENSMUSG00000085322	antisense	Gm14261	ENSMUST00000145105	antisense		2	1	168766143	1431
ENSMUSG00000052396	protein_coding	Mogat2	ENSMUST00000132343	processed_transcript		7	-1	99238594	354
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000173914	retained_intron		7	1	80294474	3645
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000173588	protein_coding		17	1	37002596	762
ENSMUSG00000021187	protein_coding	Tc2n	ENSMUST00000160830	protein_coding	principal1	12	-1	101711573	2005
ENSMUSG00000079426	protein_coding	Arpc4	ENSMUST00000156898	protein_coding	principal1	6	1	113378115	2270
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000173921	protein_coding		17	1	37002612	290
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000173824	protein_coding	alternative1	7	1	80294479	2912
ENSMUSG00000028603	protein_coding	Scp2	ENSMUST00000143340	processed_transcript		4	-1	108144994	911
ENSMUSG00000028603	protein_coding	Scp2	ENSMUST00000130776	protein_coding		4	-1	108144998	527
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000172580	protein_coding		17	1	37002670	763
ENSMUSG00000117890	lincRNA	Gm32441	ENSMUST00000237615	lincRNA		19	-1	56664611	658
ENSMUSG00000063200	protein_coding	Nol7	ENSMUST00000071926	protein_coding	principal2	13	1	43398390	1800
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000174524	protein_coding	principal3	17	1	37003038	1747
ENSMUSG00000092303	unprocessed_pseudogene	Vmn1r-ps29	ENSMUST00000174862	unprocessed_pseudogene		6	1	89997612	785
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000174172	protein_coding	alternative1	7	1	80294505	3008
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000206178	retained_intron		7	1	80294513	595
ENSMUSG00000063200	protein_coding	Nol7	ENSMUST00000222499	protein_coding	alternative2	13	1	43398392	756
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000174672	protein_coding	principal3	17	1	37003666	2597
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000174254	retained_intron		7	1	80304394	497
ENSMUSG00000079426	protein_coding	Arpc4	ENSMUST00000203578	protein_coding		6	1	113378147	1323
ENSMUSG00000063200	protein_coding	Nol7	ENSMUST00000220997	retained_intron		13	1	43398635	220
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000173170	protein_coding		7	1	80304728	703
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000172540	protein_coding		17	1	37004522	815
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000174051	protein_coding		7	1	80309397	1821
ENSMUSG00000063200	protein_coding	Nol7	ENSMUST00000222305	retained_intron		13	1	43400685	683
ENSMUSG00000036036	protein_coding	Zfp57	ENSMUST00000172502	retained_intron		17	1	37004603	500
ENSMUSG00000063200	protein_coding	Nol7	ENSMUST00000222416	retained_intron		13	1	43400993	918
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000172781	protein_coding		7	1	80310849	724
ENSMUSG00000063200	protein_coding	Nol7	ENSMUST00000223188	retained_intron		13	1	43401047	751
ENSMUSG00000079426	protein_coding	Arpc4	ENSMUST00000171058	protein_coding		6	1	113378193	695
ENSMUSG00000028773	protein_coding	Fabp3	ENSMUST00000070532	protein_coding	principal1	4	1	130308595	823
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000174111	protein_coding		7	1	80311105	733
ENSMUSG00000063200	protein_coding	Nol7	ENSMUST00000222754	protein_coding		13	1	43401330	519
ENSMUSG00000038943	protein_coding	Prc1	ENSMUST00000174599	protein_coding		7	1	80312308	291
ENSMUSG00000079426	protein_coding	Arpc4	ENSMUST00000204802	protein_coding		6	1	113378570	794
ENSMUSG00000114265	processed_pseudogene	Gm47521	ENSMUST00000225134	processed_pseudogene		13	-1	90778083	259
ENSMUSG00000031834	protein_coding	Pik3r2	ENSMUST00000034296	protein_coding	principal1	8	-1	70776713	3165
ENSMUSG00000114589	processed_pseudogene	Gm18518	ENSMUST00000224274	processed_pseudogene		13	1	90867606	1000
ENSMUSG00000009394	protein_coding	Syn2	ENSMUST00000009538	protein_coding	principal4	6	1	115134917	2708
ENSMUSG00000099625	lincRNA	Gm29325	ENSMUST00000190705	lincRNA		1	1	51195221	2528
ENSMUSG00000058626	protein_coding	Capn11	ENSMUST00000120717	protein_coding	principal1	17	-1	45659325	2591
ENSMUSG00000031834	protein_coding	Pik3r2	ENSMUST00000154685	protein_coding		8	-1	70774687	250
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000124036	protein_coding		5	-1	36586265	2765
ENSMUSG00000107252	protein_coding	Gm5767	ENSMUST00000201722	protein_coding	principal1	16	1	8680770	524
ENSMUSG00000031834	protein_coding	Pik3r2	ENSMUST00000142370	processed_transcript		8	-1	70776679	626
ENSMUSG00000058626	protein_coding	Capn11	ENSMUST00000151350	non_stop_decay		17	-1	45659297	588
ENSMUSG00000107252	protein_coding	Gm5767	ENSMUST00000202157	protein_coding		16	1	8682830	616
ENSMUSG00000101799	antisense	9330175M20Rik	ENSMUST00000189867	antisense		1	-1	51333779	2552
ENSMUSG00000031834	protein_coding	Pik3r2	ENSMUST00000152545	retained_intron		8	-1	70773164	783
ENSMUSG00000109050	processed_pseudogene	Gm6290	ENSMUST00000207666	processed_pseudogene		7	-1	54611198	1158
ENSMUSG00000020803	protein_coding	Txndc17	ENSMUST00000021158	protein_coding	principal1	11	1	72207547	981
ENSMUSG00000031834	protein_coding	Pik3r2	ENSMUST00000146707	retained_intron		8	-1	70769664	746
ENSMUSG00000009394	protein_coding	Syn2	ENSMUST00000203450	protein_coding	alternative2	6	1	115134950	3806
ENSMUSG00000031834	protein_coding	Pik3r2	ENSMUST00000143785	protein_coding		8	-1	70769388	813
ENSMUSG00000022151	protein_coding	Ttc33	ENSMUST00000118193	protein_coding	principal1	15	1	5185525	1671
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000130417	protein_coding		5	-1	36586257	2665
ENSMUSG00000056856	protein_coding	Jakmip3	ENSMUST00000166163	protein_coding		7	1	138940730	2180
ENSMUSG00000020803	protein_coding	Txndc17	ENSMUST00000128648	retained_intron		11	1	72207615	579
ENSMUSG00000009394	protein_coding	Syn2	ENSMUST00000203707	processed_transcript		6	1	115212926	688
ENSMUSG00000045954	protein_coding	Cavin2	ENSMUST00000051572	protein_coding	principal1	1	1	51289126	3055
ENSMUSG00000041396	protein_coding	Mettl18	ENSMUST00000045694	protein_coding	principal1	1	1	163994889	1513
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000139117	processed_transcript		5	-1	36493417	559
ENSMUSG00000009394	protein_coding	Syn2	ENSMUST00000204617	processed_transcript		6	1	115238994	3257
ENSMUSG00000022151	protein_coding	Ttc33	ENSMUST00000022751	protein_coding	principal1	15	1	5185560	1832
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000173532	protein_coding		5	-1	36571545	678
ENSMUSG00000033770	protein_coding	Clcnka	ENSMUST00000105790	protein_coding	principal1	4	-1	141398204	2511
ENSMUSG00000099741	processed_pseudogene	Gm5253	ENSMUST00000187104	processed_pseudogene		1	-1	51318552	1025
ENSMUSG00000009394	protein_coding	Syn2	ENSMUST00000204726	retained_intron		6	1	115252995	2372
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000150813	nonsense_mediated_decay		5	-1	36530548	1552
ENSMUSG00000009394	protein_coding	Syn2	ENSMUST00000169345	protein_coding	alternative2	6	1	115134902	3854
ENSMUSG00000022151	protein_coding	Ttc33	ENSMUST00000081640	protein_coding		15	1	5185727	1583
ENSMUSG00000108474	TEC	Gm44895	ENSMUST00000206670	TEC		7	1	54876114	1538
ENSMUSG00000041396	protein_coding	Mettl18	ENSMUST00000111490	protein_coding	principal1	1	1	163994889	1419
ENSMUSG00000022151	protein_coding	Ttc33	ENSMUST00000144653	protein_coding		15	1	5186158	727
ENSMUSG00000031838	processed_transcript	Ifi30	ENSMUST00000222087	processed_transcript		8	-1	70766663	981
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000149157	retained_intron		5	-1	36520487	1403
ENSMUSG00000022151	protein_coding	Ttc33	ENSMUST00000141167	protein_coding		15	1	5187354	409
ENSMUSG00000096424	protein_coding	Olfr885	ENSMUST00000081985	protein_coding	principal1	9	1	38061322	930
ENSMUSG00000056856	protein_coding	Jakmip3	ENSMUST00000209297	retained_intron		7	1	138989320	1461
ENSMUSG00000063297	protein_coding	Luzp2	ENSMUST00000206923	retained_intron		7	1	54835498	1915
ENSMUSG00000031838	processed_transcript	Ifi30	ENSMUST00000034299	processed_transcript		8	-1	70766663	980
ENSMUSG00000027547	protein_coding	Sall4	ENSMUST00000075044	protein_coding		2	-1	168767029	2534
ENSMUSG00000039942	protein_coding	Ptger4	ENSMUST00000133966	processed_transcript		15	-1	5242710	3771
ENSMUSG00000056856	protein_coding	Jakmip3	ENSMUST00000238616	retained_intron		7	1	138989323	1452
ENSMUSG00000110575	TEC	6330537M06Rik	ENSMUST00000212384	TEC		8	1	70766579	1642
ENSMUSG00000033770	protein_coding	Clcnka	ENSMUST00000042617	protein_coding	principal1	4	-1	141398724	2428
ENSMUSG00000103960	processed_pseudogene	Gm37119	ENSMUST00000195691	processed_pseudogene		1	1	164031960	389
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000141017	nonsense_mediated_decay		5	-1	36530519	538
ENSMUSG00000110602	unprocessed_pseudogene	Olfr886-ps1	ENSMUST00000212395	unprocessed_pseudogene		9	1	38069587	708
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000141626	processed_transcript		5	-1	36530507	315
ENSMUSG00000056856	protein_coding	Jakmip3	ENSMUST00000171843	protein_coding		7	1	139062611	3391
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000156658	retained_intron		5	-1	36582390	2783
ENSMUSG00000033770	protein_coding	Clcnka	ENSMUST00000150334	retained_intron		4	-1	141394827	794
ENSMUSG00000033770	protein_coding	Clcnka	ENSMUST00000133676	protein_coding		4	-1	141398574	655
ENSMUSG00000009876	protein_coding	Cox4i2	ENSMUST00000010020	protein_coding	principal1	2	1	152754173	727
ENSMUSG00000108541	processed_pseudogene	Gm44795	ENSMUST00000205496	processed_pseudogene		7	1	65401847	319
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000146252	processed_transcript		5	-1	36564056	376
ENSMUSG00000056856	protein_coding	Jakmip3	ENSMUST00000238324	processed_transcript		7	1	139077432	358
ENSMUSG00000096167	protein_coding	Olfr887	ENSMUST00000212502	protein_coding	principal1	9	1	38084072	6281
ENSMUSG00000108338	TEC	Gm44794	ENSMUST00000206550	TEC		7	-1	65366782	411
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000140179	protein_coding		5	-1	36573495	914
ENSMUSG00000063297	protein_coding	Luzp2	ENSMUST00000082373	protein_coding	principal1	7	1	54835615	4901
ENSMUSG00000012405	protein_coding	Rpl15	ENSMUST00000080281	protein_coding	principal1	14	-1	18271067	1922
ENSMUSG00000056856	protein_coding	Jakmip3	ENSMUST00000106111	protein_coding	principal1	7	1	138940730	1571
ENSMUSG00000096167	protein_coding	Olfr887	ENSMUST00000213091	protein_coding		9	1	38084528	615
ENSMUSG00000108581	TEC	Gm44896	ENSMUST00000206190	TEC		7	-1	54932549	772
ENSMUSG00000096167	protein_coding	Olfr887	ENSMUST00000074681	protein_coding	principal1	9	1	38084838	930
ENSMUSG00000018861	protein_coding	Fdxr	ENSMUST00000021078	protein_coding	principal1	11	-1	115277050	1948
ENSMUSG00000108519	TEC	4833421K07Rik	ENSMUST00000206146	TEC		7	1	55088597	1391
ENSMUSG00000109855	antisense	Gm45613	ENSMUST00000210718	antisense		7	-1	139020999	443
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000150733	retained_intron		5	-1	36586224	1113
ENSMUSG00000108326	processed_pseudogene	Gm17838	ENSMUST00000205872	processed_pseudogene		7	-1	55243942	876
ENSMUSG00000103702	processed_pseudogene	Gm37290	ENSMUST00000195775	processed_pseudogene		3	1	76822059	339
ENSMUSG00000009876	protein_coding	Cox4i2	ENSMUST00000109821	protein_coding	principal1	2	1	152755094	733
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000139182	protein_coding		5	-1	36586224	749
ENSMUSG00000108665	TEC	Gm44897	ENSMUST00000206187	TEC		7	1	54883119	1341
ENSMUSG00000012405	protein_coding	Rpl15	ENSMUST00000100799	protein_coding	principal1	14	-1	18270970	802
ENSMUSG00000102216	processed_pseudogene	Gm19231	ENSMUST00000193212	processed_pseudogene		3	1	76884496	830
ENSMUSG00000108756	TEC	Gm44894	ENSMUST00000205280	TEC		7	1	55025042	2174
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000144997	protein_coding		5	-1	36573266	712
ENSMUSG00000018861	protein_coding	Fdxr	ENSMUST00000155130	processed_transcript		11	-1	115276914	1499
ENSMUSG00000102489	processed_pseudogene	Dnmt3a-ps1	ENSMUST00000192011	processed_pseudogene		3	-1	77563870	1271
ENSMUSG00000027714	protein_coding	Exosc9	ENSMUST00000155866	nonsense_mediated_decay		3	1	36552606	1227
ENSMUSG00000095527	protein_coding	Olfr888	ENSMUST00000211851	protein_coding	principal1	9	1	38108128	2930
ENSMUSG00000012405	protein_coding	Rpl15	ENSMUST00000079419	protein_coding	principal1	14	-1	18271029	883
ENSMUSG00000018861	protein_coding	Fdxr	ENSMUST00000139437	processed_transcript		11	-1	115276724	861
ENSMUSG00000103849	TEC	Gm37806	ENSMUST00000194524	TEC		3	-1	77571342	6387
ENSMUSG00000095527	protein_coding	Olfr888	ENSMUST00000075228	protein_coding		9	1	38108688	945
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000136490	protein_coding		5	-1	36593251	784
ENSMUSG00000039942	protein_coding	Ptger4	ENSMUST00000120563	protein_coding	alternative2	15	-1	5244172	3312
ENSMUSG00000018861	protein_coding	Fdxr	ENSMUST00000147500	processed_transcript		11	-1	115269014	544
ENSMUSG00000102872	TEC	Gm38195	ENSMUST00000194247	TEC		3	-1	77704386	1499
ENSMUSG00000012405	protein_coding	Rpl15	ENSMUST00000224196	retained_intron		14	-1	18270119	565
ENSMUSG00000012405	protein_coding	Rpl15	ENSMUST00000112598	protein_coding	principal1	14	-1	18270626	802
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000147603	protein_coding		5	-1	36593276	379
ENSMUSG00000030317	protein_coding	Timp4	ENSMUST00000032462	protein_coding	principal1	6	-1	115252205	5496
ENSMUSG00000012405	protein_coding	Rpl15	ENSMUST00000147121	protein_coding		14	-1	18271391	505
ENSMUSG00000030317	protein_coding	Timp4	ENSMUST00000205131	protein_coding		6	-1	115251848	945
ENSMUSG00000029192	protein_coding	Tbc1d14	ENSMUST00000171385	protein_coding	alternative1	5	-1	36530623	3884
ENSMUSG00000039942	protein_coding	Ptger4	ENSMUST00000047379	protein_coding	principal3	15	-1	5244187	3264
ENSMUSG00000027547	protein_coding	Sall4	ENSMUST00000029061	protein_coding	principal1	2	-1	168767201	5073
ENSMUSG00000027547	protein_coding	Sall4	ENSMUST00000103074	protein_coding		2	-1	168767201	3741
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000023616	protein_coding	principal2	16	-1	36784962	3994
ENSMUSG00000036095	protein_coding	Dgkb	ENSMUST00000221176	protein_coding		12	1	37880174	1439
ENSMUSG00000027547	protein_coding	Sall4	ENSMUST00000150588	protein_coding		2	-1	168755943	393
ENSMUSG00000021772	protein_coding	Nkiras1	ENSMUST00000132374	protein_coding	principal1	14	1	18271136	4598
ENSMUSG00000038546	protein_coding	Ranbp9	ENSMUST00000144326	protein_coding	principal2	13	-1	43481282	3371
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000165380	nonsense_mediated_decay		16	-1	36784792	1292
ENSMUSG00000027547	protein_coding	Sall4	ENSMUST00000137536	protein_coding		2	-1	168765246	773
ENSMUSG00000038546	protein_coding	Ranbp9	ENSMUST00000220601	retained_intron		13	-1	43408028	2290
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000165531	protein_coding	alternative2	16	-1	36784820	2158
ENSMUSG00000027547	protein_coding	Sall4	ENSMUST00000125138	processed_transcript		2	-1	168767943	423
ENSMUSG00000020953	protein_coding	Coch	ENSMUST00000164782	protein_coding	principal1	12	1	51593341	2681
ENSMUSG00000038546	protein_coding	Ranbp9	ENSMUST00000221092	protein_coding		13	-1	43412484	509
ENSMUSG00000021772	protein_coding	Nkiras1	ENSMUST00000133460	protein_coding		14	1	18271186	619
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000163471	retained_intron		16	-1	36754758	622
ENSMUSG00000027547	protein_coding	Sall4	ENSMUST00000130640	processed_transcript		2	-1	168767117	328
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000172382	processed_transcript		16	-1	36755407	694
ENSMUSG00000038546	protein_coding	Ranbp9	ENSMUST00000222651	protein_coding	alternative2	13	-1	43478907	1951
ENSMUSG00000021772	protein_coding	Nkiras1	ENSMUST00000152735	retained_intron		14	1	18271204	747
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000163964	retained_intron		16	-1	36756704	679
ENSMUSG00000029544	protein_coding	Cabp1	ENSMUST00000031519	protein_coding	principal3	5	-1	115186308	1370
ENSMUSG00000044788	protein_coding	Fads6	ENSMUST00000056153	protein_coding	principal1	11	-1	115297514	4951
ENSMUSG00000021772	protein_coding	Nkiras1	ENSMUST00000150209	processed_transcript		14	1	18271211	476
ENSMUSG00000029544	protein_coding	Cabp1	ENSMUST00000112113	protein_coding		5	-1	115194381	1621
ENSMUSG00000020953	protein_coding	Coch	ENSMUST00000085412	protein_coding	principal1	12	1	51593357	2456
ENSMUSG00000029279	protein_coding	Brdt	ENSMUST00000031215	protein_coding	principal1	5	1	107331159	4745
ENSMUSG00000044788	protein_coding	Fads6	ENSMUST00000141006	processed_transcript		11	-1	115297663	1890
ENSMUSG00000021772	protein_coding	Nkiras1	ENSMUST00000022294	nonsense_mediated_decay		14	1	18271227	1199
ENSMUSG00000020953	protein_coding	Coch	ENSMUST00000218382	retained_intron		12	1	51593374	418
ENSMUSG00000019539	protein_coding	Rcn3	ENSMUST00000211352	protein_coding	principal1	7	-1	45092221	1453
ENSMUSG00000020953	protein_coding	Coch	ENSMUST00000220173	retained_intron		12	1	51593379	650
ENSMUSG00000021772	protein_coding	Nkiras1	ENSMUST00000145355	retained_intron		14	1	18271238	338
ENSMUSG00000019539	protein_coding	Rcn3	ENSMUST00000019683	protein_coding	principal1	7	-1	45092221	1462
ENSMUSG00000029279	protein_coding	Brdt	ENSMUST00000112677	protein_coding		5	1	107331175	1607
ENSMUSG00000021772	protein_coding	Nkiras1	ENSMUST00000156186	processed_transcript		14	1	18271264	738
ENSMUSG00000019539	protein_coding	Rcn3	ENSMUST00000209761	protein_coding		7	-1	45091454	892
ENSMUSG00000029279	protein_coding	Brdt	ENSMUST00000161377	processed_transcript		5	1	107331192	369
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000143151	processed_transcript		16	1	32877500	445
ENSMUSG00000019539	protein_coding	Rcn3	ENSMUST00000210615	retained_intron		7	-1	45083878	589
ENSMUSG00000050697	protein_coding	Prkaa1	ENSMUST00000228218	protein_coding		15	1	5143891	4618
ENSMUSG00000019539	protein_coding	Rcn3	ENSMUST00000211760	protein_coding		7	-1	45088607	471
ENSMUSG00000052533	protein_coding	Nup188	ENSMUST00000148969	nonsense_mediated_decay		2	1	30286397	888
ENSMUSG00000029279	protein_coding	Brdt	ENSMUST00000162804	processed_transcript		5	1	107359837	1568
ENSMUSG00000019539	protein_coding	Rcn3	ENSMUST00000210734	protein_coding		7	-1	45092185	905
ENSMUSG00000029586	protein_coding	Spdye4b	ENSMUST00000031574	protein_coding	principal1	5	1	143181017	2165
ENSMUSG00000053852	protein_coding	Adgrg4	ENSMUST00000154818	protein_coding	alternative2	X	1	56870163	8857
ENSMUSG00000081798	processed_pseudogene	Gm8152	ENSMUST00000120842	processed_pseudogene		5	-1	107382017	637
ENSMUSG00000050697	protein_coding	Prkaa1	ENSMUST00000051186	protein_coding	principal1	15	1	5143861	4655
ENSMUSG00000053852	protein_coding	Adgrg4	ENSMUST00000153784	protein_coding	principal5	X	1	56872543	9329
ENSMUSG00000031886	protein_coding	Ces2e	ENSMUST00000109410	protein_coding	principal1	8	1	104926264	1999
ENSMUSG00000053852	protein_coding	Adgrg4	ENSMUST00000136396	protein_coding		X	1	56894372	8243
ENSMUSG00000019539	protein_coding	Rcn3	ENSMUST00000210469	protein_coding		7	-1	45092214	884
ENSMUSG00000038546	protein_coding	Ranbp9	ENSMUST00000222239	nonsense_mediated_decay		13	-1	43461731	836
ENSMUSG00000029586	protein_coding	Spdye4b	ENSMUST00000159781	protein_coding	principal1	5	1	143181484	1128
ENSMUSG00000038546	protein_coding	Ranbp9	ENSMUST00000220529	retained_intron		13	-1	43430796	592
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000167941	processed_transcript		16	-1	36762854	1170
ENSMUSG00000087532	antisense	Gm15938	ENSMUST00000150079	antisense		15	-1	5185723	635
ENSMUSG00000038546	protein_coding	Ranbp9	ENSMUST00000220500	nonsense_mediated_decay		13	-1	43480671	778
ENSMUSG00000019539	protein_coding	Rcn3	ENSMUST00000210527	protein_coding		7	-1	45091725	389
ENSMUSG00000021102	protein_coding	Glrx5	ENSMUST00000223244	protein_coding		12	1	105032688	793
ENSMUSG00000029544	protein_coding	Cabp1	ENSMUST00000112109	processed_transcript		5	-1	115181422	1071
ENSMUSG00000094683	processed_pseudogene	Ap3m1-ps	ENSMUST00000177652	processed_pseudogene		10	1	82585426	1258
ENSMUSG00000019539	protein_coding	Rcn3	ENSMUST00000210355	retained_intron		7	-1	45092123	381
ENSMUSG00000038546	protein_coding	Ranbp9	ENSMUST00000222023	protein_coding		13	-1	43479337	396
ENSMUSG00000029544	protein_coding	Cabp1	ENSMUST00000112112	protein_coding	alternative1	5	-1	115186121	746
ENSMUSG00000109947	antisense	Gm45669	ENSMUST00000209808	antisense		7	1	45091409	459
ENSMUSG00000031886	protein_coding	Ces2e	ENSMUST00000034355	protein_coding	principal1	8	1	104926260	2699
ENSMUSG00000053852	protein_coding	Adgrg4	ENSMUST00000096431	protein_coding		X	1	56963325	1137
ENSMUSG00000029121	protein_coding	Crmp1	ENSMUST00000114158	protein_coding		5	1	37242080	3051
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000164770	processed_transcript		16	-1	36762664	874
ENSMUSG00000053852	protein_coding	Adgrg4	ENSMUST00000145035	protein_coding		X	1	56968120	705
ENSMUSG00000029544	protein_coding	Cabp1	ENSMUST00000145197	nonsense_mediated_decay		5	-1	115186056	840
ENSMUSG00000029544	protein_coding	Cabp1	ENSMUST00000151775	retained_intron		5	-1	115181259	783
ENSMUSG00000053852	protein_coding	Adgrg4	ENSMUST00000168724	protein_coding		X	1	56913421	531
ENSMUSG00000029544	protein_coding	Cabp1	ENSMUST00000201900	retained_intron		5	-1	115184144	3914
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000100308	processed_transcript		16	-1	36763393	430
ENSMUSG00000006392	protein_coding	Med8	ENSMUST00000084319	protein_coding		4	1	118409337	1134
ENSMUSG00000021102	protein_coding	Glrx5	ENSMUST00000021522	protein_coding	principal1	12	1	105032690	2925
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000167909	retained_intron		16	-1	36762580	729
ENSMUSG00000073367	processed_pseudogene	Gm10493	ENSMUST00000097270	processed_pseudogene		17	1	90454889	610
ENSMUSG00000029190	protein_coding	D5Ertd579e	ENSMUST00000031091	protein_coding	principal1	5	-1	36695937	6677
ENSMUSG00000029586	protein_coding	Spdye4b	ENSMUST00000198090	processed_transcript		5	1	143194126	1323
ENSMUSG00000105080	TR_V_gene	Trav7n-6	ENSMUST00000178100	TR_V_gene	principal1	14	1	53324632	381
ENSMUSG00000029586	protein_coding	Spdye4b	ENSMUST00000197330	processed_transcript		5	1	143194131	807
ENSMUSG00000021102	protein_coding	Glrx5	ENSMUST00000220494	processed_transcript		12	1	105035216	722
ENSMUSG00000102393	processed_pseudogene	Gm37576	ENSMUST00000194228	processed_pseudogene		3	-1	77873153	372
ENSMUSG00000082101	protein_coding	Slfn14	ENSMUST00000163961	protein_coding	principal1	11	-1	83286726	3706
ENSMUSG00000006392	protein_coding	Med8	ENSMUST00000126089	protein_coding		4	1	118409349	352
ENSMUSG00000027229	protein_coding	Terb2	ENSMUST00000028661	protein_coding	principal1	2	1	122186272	2115
ENSMUSG00000071033	3prime_overlapping_ncRNA	Gm10308	ENSMUST00000095183	3prime_overlapping_ncRNA		17	1	91088493	742
ENSMUSG00000092549	processed_pseudogene	Gm20491	ENSMUST00000173765	processed_pseudogene		17	-1	90794006	1241
ENSMUSG00000096038	TR_V_gene	Trav13n-3	ENSMUST00000179580	TR_V_gene	principal1	14	1	53337122	337
ENSMUSG00000029190	protein_coding	D5Ertd579e	ENSMUST00000132383	protein_coding		5	-1	36613730	1148
ENSMUSG00000006392	protein_coding	Med8	ENSMUST00000073881	protein_coding		4	1	118409355	1052
ENSMUSG00000090160	antisense	4930480K15Rik	ENSMUST00000162121	antisense		17	1	90861169	2199
ENSMUSG00000093716	processed_pseudogene	Gm19815	ENSMUST00000175818	processed_pseudogene		17	-1	90567757	335
ENSMUSG00000105418	antisense	Gm43650	ENSMUST00000197337	antisense		14	-1	53343922	1382
ENSMUSG00000026582	protein_coding	Sele	ENSMUST00000027874	protein_coding	principal1	1	1	164048234	2912
ENSMUSG00000029121	protein_coding	Crmp1	ENSMUST00000201834	protein_coding		5	1	37242734	673
ENSMUSG00000027229	protein_coding	Terb2	ENSMUST00000149861	processed_transcript		2	1	122186474	448
ENSMUSG00000029190	protein_coding	D5Ertd579e	ENSMUST00000150088	processed_transcript		5	-1	36621255	781
ENSMUSG00000102014	antisense	2900009J06Rik	ENSMUST00000188163	antisense		1	-1	127774054	465
ENSMUSG00000006392	protein_coding	Med8	ENSMUST00000130421	processed_transcript		4	1	118409356	775
ENSMUSG00000021774	protein_coding	Ube2e1	ENSMUST00000022296	protein_coding	principal1	14	-1	18331859	1408
ENSMUSG00000033885	protein_coding	Pxk	ENSMUST00000036682	protein_coding	principal1	14	1	8098211	2812
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000164579	protein_coding		16	-1	36784940	1068
ENSMUSG00000027714	protein_coding	Exosc9	ENSMUST00000029269	protein_coding	principal1	3	1	36552606	1617
ENSMUSG00000029190	protein_coding	D5Ertd579e	ENSMUST00000140063	retained_intron		5	-1	36695961	1764
ENSMUSG00000101086	lincRNA	Gm28651	ENSMUST00000185335	lincRNA		14	1	32685648	644
ENSMUSG00000076821	TR_V_gene	Trav8n-2	ENSMUST00000103632	TR_V_gene	principal1	14	1	53345890	408
ENSMUSG00000102014	antisense	2900009J06Rik	ENSMUST00000185310	antisense		1	-1	127774092	498
ENSMUSG00000029190	protein_coding	D5Ertd579e	ENSMUST00000201720	retained_intron		5	-1	36695937	3251
ENSMUSG00000096356	protein_coding	Olfr889	ENSMUST00000217286	protein_coding	principal1	9	1	38115198	5673
ENSMUSG00000021774	protein_coding	Ube2e1	ENSMUST00000225612	protein_coding		14	-1	18331744	550
ENSMUSG00000101086	lincRNA	Gm28651	ENSMUST00000227968	lincRNA		14	1	32686558	2693
ENSMUSG00000033885	protein_coding	Pxk	ENSMUST00000225827	retained_intron		14	1	8098223	386
ENSMUSG00000096356	protein_coding	Olfr889	ENSMUST00000072290	protein_coding		9	1	38115692	945
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000168279	protein_coding		16	-1	36784924	958
ENSMUSG00000029190	protein_coding	D5Ertd579e	ENSMUST00000140653	protein_coding		5	-1	36696024	2014
ENSMUSG00000029121	protein_coding	Crmp1	ENSMUST00000031004	protein_coding	principal1	5	1	37245764	2906
ENSMUSG00000096409	protein_coding	Olfr890	ENSMUST00000213458	protein_coding	principal1	9	1	38142517	5475
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000166399	retained_intron		16	-1	36773278	928
ENSMUSG00000029190	protein_coding	D5Ertd579e	ENSMUST00000202510	retained_intron		5	-1	36695970	6954
ENSMUSG00000096409	protein_coding	Olfr890	ENSMUST00000079804	protein_coding		9	1	38143137	945
ENSMUSG00000076822	TR_V_gene	Trav16n	ENSMUST00000199280	TR_V_gene	principal5	14	1	53351028	412
ENSMUSG00000022899	protein_coding	Slc15a2	ENSMUST00000169644	retained_intron		16	-1	36782465	516
ENSMUSG00000030167	protein_coding	Klrc1	ENSMUST00000032270	protein_coding	alternative2	6	-1	129678973	1984
ENSMUSG00000021774	protein_coding	Ube2e1	ENSMUST00000160266	retained_intron		14	-1	18331034	492
ENSMUSG00000029121	protein_coding	Crmp1	ENSMUST00000201315	retained_intron		5	1	37245845	575
ENSMUSG00000076822	TR_V_gene	Trav16n	ENSMUST00000103633	TR_V_gene	alternative2	14	1	53351090	353
ENSMUSG00000029121	protein_coding	Crmp1	ENSMUST00000202652	protein_coding		5	1	37247285	846
ENSMUSG00000030167	protein_coding	Klrc1	ENSMUST00000169545	protein_coding	alternative2	6	-1	129678928	676
ENSMUSG00000021774	protein_coding	Ube2e1	ENSMUST00000162831	processed_transcript		14	-1	18327291	370
ENSMUSG00000029121	protein_coding	Crmp1	ENSMUST00000202377	retained_intron		5	1	37268741	766
ENSMUSG00000006392	protein_coding	Med8	ENSMUST00000019229	protein_coding	principal1	4	1	118409366	1145
ENSMUSG00000027087	protein_coding	Itgav	ENSMUST00000028499	protein_coding	principal2	2	1	83724397	7054
ENSMUSG00000029121	protein_coding	Crmp1	ENSMUST00000201453	retained_intron		5	1	37280438	2268
ENSMUSG00000033885	protein_coding	Pxk	ENSMUST00000225616	retained_intron		14	1	8098252	2121
ENSMUSG00000027714	protein_coding	Exosc9	ENSMUST00000138636	retained_intron		3	1	36552614	1770
ENSMUSG00000085562	lincRNA	2610028E06Rik	ENSMUST00000123368	lincRNA		4	-1	125898982	3467
ENSMUSG00000029121	protein_coding	Crmp1	ENSMUST00000201765	retained_intron		5	1	37280467	503
ENSMUSG00000029121	protein_coding	Crmp1	ENSMUST00000200834	retained_intron		5	1	37283899	595
ENSMUSG00000043298	protein_coding	Smco3	ENSMUST00000068293	protein_coding	principal1	6	-1	136835450	2056
ENSMUSG00000030605	protein_coding	Mfge8	ENSMUST00000206338	retained_intron		7	-1	79143786	2330
ENSMUSG00000021774	protein_coding	Ube2e1	ENSMUST00000161580	retained_intron		14	-1	18331097	2762
ENSMUSG00000006392	protein_coding	Med8	ENSMUST00000144577	protein_coding		4	1	118409401	635
ENSMUSG00000027714	protein_coding	Exosc9	ENSMUST00000149041	retained_intron		3	1	36552627	913
ENSMUSG00000085562	lincRNA	2610028E06Rik	ENSMUST00000148534	lincRNA		4	-1	125922310	3543
ENSMUSG00000084983	antisense	Gm11789	ENSMUST00000140989	antisense		11	-1	120530554	563
ENSMUSG00000006392	protein_coding	Med8	ENSMUST00000152633	processed_transcript		4	1	118410348	795
ENSMUSG00000027087	protein_coding	Itgav	ENSMUST00000125360	retained_intron		2	1	83724397	1738
ENSMUSG00000043298	protein_coding	Smco3	ENSMUST00000203468	protein_coding	principal1	6	-1	136835379	1791
ENSMUSG00000027714	protein_coding	Exosc9	ENSMUST00000136890	protein_coding		3	1	36552638	647
ENSMUSG00000006392	protein_coding	Med8	ENSMUST00000125235	processed_transcript		4	1	118411437	538
ENSMUSG00000027087	protein_coding	Itgav	ENSMUST00000151463	retained_intron		2	1	83724466	1105
ENSMUSG00000030167	protein_coding	Klrc1	ENSMUST00000118447	protein_coding	principal3	6	-1	129678910	684
ENSMUSG00000006392	protein_coding	Med8	ENSMUST00000135201	processed_transcript		4	1	118411628	815
ENSMUSG00000043298	protein_coding	Smco3	ENSMUST00000111894	protein_coding	principal1	6	-1	136835452	1069
ENSMUSG00000027087	protein_coding	Itgav	ENSMUST00000148256	processed_transcript		2	1	83724527	592
ENSMUSG00000027087	protein_coding	Itgav	ENSMUST00000111740	protein_coding	alternative2	2	1	83724555	6788
ENSMUSG00000027714	protein_coding	Exosc9	ENSMUST00000133854	retained_intron		3	1	36552651	2479
ENSMUSG00000084983	antisense	Gm11789	ENSMUST00000139357	antisense		11	-1	120531488	514
ENSMUSG00000085562	lincRNA	2610028E06Rik	ENSMUST00000156350	lincRNA		4	-1	125922417	3623
ENSMUSG00000026348	protein_coding	Acmsd	ENSMUST00000038006	protein_coding	principal1	1	1	127729413	2717
ENSMUSG00000027714	protein_coding	Exosc9	ENSMUST00000156100	protein_coding		3	1	36555553	515
ENSMUSG00000024436	protein_coding	Mrps18b	ENSMUST00000025305	protein_coding	principal1	17	-1	35916389	1079
ENSMUSG00000107048	sense_intronic	Gm43807	ENSMUST00000200678	sense_intronic		5	1	150752093	1781
ENSMUSG00000085562	lincRNA	2610028E06Rik	ENSMUST00000153589	lincRNA		4	-1	125917171	867
ENSMUSG00000084983	antisense	Gm11789	ENSMUST00000148579	antisense		11	-1	120531784	649
ENSMUSG00000047515	protein_coding	BC049715	ENSMUST00000205058	retained_intron		6	1	136827626	5539
ENSMUSG00000050395	protein_coding	Tnfsf15	ENSMUST00000062246	protein_coding	alternative2	4	-1	63745113	3347
ENSMUSG00000085562	lincRNA	2610028E06Rik	ENSMUST00000144539	lincRNA		4	-1	125922417	573
ENSMUSG00000006392	protein_coding	Med8	ENSMUST00000106384	protein_coding		4	1	118409337	1743
ENSMUSG00000024436	protein_coding	Mrps18b	ENSMUST00000113782	protein_coding		17	-1	35916389	803
ENSMUSG00000003420	protein_coding	Fcgrt	ENSMUST00000003512	protein_coding	principal2	7	-1	45103851	1770
ENSMUSG00000027714	protein_coding	Exosc9	ENSMUST00000131316	protein_coding		3	1	36562096	682
ENSMUSG00000047515	protein_coding	BC049715	ENSMUST00000204086	protein_coding		6	1	136827985	323
ENSMUSG00000084983	antisense	Gm11789	ENSMUST00000140645	antisense		11	-1	120531513	737
ENSMUSG00000027087	protein_coding	Itgav	ENSMUST00000141725	protein_coding		2	1	83724452	688
ENSMUSG00000026348	protein_coding	Acmsd	ENSMUST00000186537	processed_transcript		1	1	127756757	2082
ENSMUSG00000050395	protein_coding	Tnfsf15	ENSMUST00000239480	protein_coding	principal2	4	-1	63745113	5828
ENSMUSG00000030167	protein_coding	Klrc1	ENSMUST00000032271	protein_coding	alternative2	6	-1	129678973	822
ENSMUSG00000101702	lincRNA	1700072G22Rik	ENSMUST00000189460	lincRNA		1	-1	51458931	548
ENSMUSG00000024436	protein_coding	Mrps18b	ENSMUST00000174807	protein_coding		17	-1	35916330	848
ENSMUSG00000105026	processed_pseudogene	Gm18719	ENSMUST00000196696	processed_pseudogene		3	1	77961384	1413
ENSMUSG00000084983	antisense	Gm11789	ENSMUST00000123579	antisense		11	-1	120531497	332
ENSMUSG00000047515	protein_coding	BC049715	ENSMUST00000052702	protein_coding	principal1	6	1	136828843	1120
ENSMUSG00000027087	protein_coding	Itgav	ENSMUST00000155521	processed_transcript		2	1	83724457	2777
ENSMUSG00000103312	processed_pseudogene	Gm6677	ENSMUST00000195100	processed_pseudogene		3	1	78006459	441
ENSMUSG00000118611	unprocessed_pseudogene	AC166833.1	ENSMUST00000239300	unprocessed_pseudogene		8	1	104939565	653
ENSMUSG00000024436	protein_coding	Mrps18b	ENSMUST00000173737	retained_intron		17	-1	35912566	743
ENSMUSG00000040740	protein_coding	Slc25a34	ENSMUST00000038661	protein_coding	principal1	4	-1	141623821	2670
ENSMUSG00000047515	protein_coding	BC049715	ENSMUST00000203499	protein_coding	principal1	6	1	136830903	2057
ENSMUSG00000102637	processed_pseudogene	Gm8684	ENSMUST00000195078	processed_pseudogene		3	-1	78087396	1564
ENSMUSG00000024436	protein_coding	Mrps18b	ENSMUST00000174349	protein_coding		17	-1	35916337	488
ENSMUSG00000047515	protein_coding	BC049715	ENSMUST00000163640	protein_coding	principal1	6	1	136839764	744
ENSMUSG00000103817	processed_pseudogene	Gm6680	ENSMUST00000192789	processed_pseudogene		3	1	78134630	950
ENSMUSG00000027087	protein_coding	Itgav	ENSMUST00000125402	protein_coding		2	1	83801849	444
ENSMUSG00000033885	protein_coding	Pxk	ENSMUST00000225653	protein_coding		14	1	8098255	2765
ENSMUSG00000024436	protein_coding	Mrps18b	ENSMUST00000172642	protein_coding		17	-1	35916323	346
ENSMUSG00000104782	TEC	Gm43326	ENSMUST00000198459	TEC		3	-1	78405938	1638
ENSMUSG00000027087	protein_coding	Itgav	ENSMUST00000131192	protein_coding		2	1	83802921	463
ENSMUSG00000057244	processed_pseudogene	Gm6139	ENSMUST00000079261	processed_pseudogene		5	-1	129623871	882
ENSMUSG00000085335	processed_transcript	Gm13684	ENSMUST00000152569	processed_transcript		2	-1	83759865	2264
ENSMUSG00000033885	protein_coding	Pxk	ENSMUST00000224462	processed_transcript		14	1	8135354	427
ENSMUSG00000024436	protein_coding	Mrps18b	ENSMUST00000174574	retained_intron		17	-1	35916377	907
ENSMUSG00000024436	protein_coding	Mrps18b	ENSMUST00000173792	processed_transcript		17	-1	35916203	441
ENSMUSG00000033885	protein_coding	Pxk	ENSMUST00000112689	protein_coding		14	1	8098213	2840
ENSMUSG00000084998	antisense	Gm16279	ENSMUST00000149452	antisense		17	1	35896946	2945
ENSMUSG00000047225	protein_coding	Olfr684	ENSMUST00000215552	protein_coding	principal1	7	-1	105163491	3174
ENSMUSG00000003420	protein_coding	Fcgrt	ENSMUST00000210642	protein_coding	alternative2	7	-1	45103745	1602
ENSMUSG00000047225	protein_coding	Olfr684	ENSMUST00000215744	protein_coding	principal1	7	-1	105163584	3084
ENSMUSG00000003420	protein_coding	Fcgrt	ENSMUST00000211668	retained_intron		7	-1	45103755	1343
ENSMUSG00000047225	protein_coding	Olfr684	ENSMUST00000217136	protein_coding	principal1	7	-1	105163653	3182
ENSMUSG00000047225	protein_coding	Olfr684	ENSMUST00000060893	protein_coding	principal1	7	-1	105157680	939
ENSMUSG00000003420	protein_coding	Fcgrt	ENSMUST00000211085	protein_coding		7	-1	45103744	772
ENSMUSG00000003420	protein_coding	Fcgrt	ENSMUST00000209830	protein_coding		7	-1	45103086	127
ENSMUSG00000030357	protein_coding	Fkbp4	ENSMUST00000139448	retained_intron		6	-1	128438677	2678
ENSMUSG00000085542	lincRNA	1700037C06Rik	ENSMUST00000132824	lincRNA		4	-1	137117582	874
ENSMUSG00000024027	protein_coding	Glp1r	ENSMUST00000114574	protein_coding	principal1	17	1	30901817	5811
ENSMUSG00000087417	lincRNA	Gm13001	ENSMUST00000154285	lincRNA		4	-1	137118143	774
ENSMUSG00000003420	protein_coding	Fcgrt	ENSMUST00000211535	retained_intron		7	-1	45103795	595
ENSMUSG00000117859	processed_transcript	Gm32492	ENSMUST00000236806	lincRNA		19	1	56669118	444
ENSMUSG00000032554	protein_coding	Trf	ENSMUST00000112645	protein_coding	principal1	9	-1	103230273	2339
ENSMUSG00000024027	protein_coding	Glp1r	ENSMUST00000236038	nonsense_mediated_decay		17	1	30901859	2376
ENSMUSG00000117859	processed_transcript	Gm32492	ENSMUST00000237417	retained_intron		19	1	56672619	575
ENSMUSG00000117835	processed_transcript	Gm50250	ENSMUST00000237696	processed_transcript		17	1	30450398	674
ENSMUSG00000111612	processed_pseudogene	Gm47090	ENSMUST00000213361	processed_pseudogene		9	-1	14525761	672
ENSMUSG00000030525	protein_coding	Chrna7	ENSMUST00000032738	protein_coding	principal1	7	-1	63212513	2078
ENSMUSG00000022235	protein_coding	Cmbl	ENSMUST00000226951	protein_coding		15	1	31565389	777
ENSMUSG00000017692	protein_coding	Rhbdl3	ENSMUST00000017836	protein_coding	principal1	11	1	80300912	3736
ENSMUSG00000032554	protein_coding	Trf	ENSMUST00000035158	protein_coding	principal1	9	-1	103230444	2571
ENSMUSG00000073628	antisense	Gm10552	ENSMUST00000161763	antisense		1	-1	85611896	717
ENSMUSG00000073628	antisense	Gm10552	ENSMUST00000113396	antisense		1	-1	85610224	372
ENSMUSG00000022235	protein_coding	Cmbl	ENSMUST00000162532	protein_coding		15	1	31568791	690
ENSMUSG00000017692	protein_coding	Rhbdl3	ENSMUST00000138846	retained_intron		11	1	80319690	827
ENSMUSG00000100127	transcribed_unprocessed_pseudogene	Gsdmcl-ps	ENSMUST00000191285	processed_transcript		15	1	63914448	637
ENSMUSG00000017692	protein_coding	Rhbdl3	ENSMUST00000157016	retained_intron		11	1	80346403	752
ENSMUSG00000032554	protein_coding	Trf	ENSMUST00000190051	retained_intron		9	-1	103212006	433
ENSMUSG00000030525	protein_coding	Chrna7	ENSMUST00000208304	processed_transcript		7	-1	63212569	2814
ENSMUSG00000109057	TEC	Gm44741	ENSMUST00000207503	TEC		7	-1	63136290	2127
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000141998	retained_intron		1	1	85649988	699
ENSMUSG00000106915	TEC	Gm42655	ENSMUST00000202782	TEC		5	1	120255258	1134
ENSMUSG00000032554	protein_coding	Trf	ENSMUST00000168142	protein_coding		9	-1	103219866	745
ENSMUSG00000107141	lincRNA	Gm42654	ENSMUST00000201741	lincRNA		5	-1	120345968	448
ENSMUSG00000032554	protein_coding	Trf	ENSMUST00000170904	protein_coding		9	-1	103222063	835
ENSMUSG00000036095	protein_coding	Dgkb	ENSMUST00000220990	protein_coding	principal1	12	1	37880337	4085
ENSMUSG00000022235	protein_coding	Cmbl	ENSMUST00000070918	protein_coding	principal1	15	1	31568798	1155
ENSMUSG00000107141	lincRNA	Gm42654	ENSMUST00000200789	lincRNA		5	-1	120342559	494
ENSMUSG00000066148	protein_coding	Prpf4	ENSMUST00000084524	protein_coding	principal1	4	1	62408797	5223
ENSMUSG00000109472	processed_pseudogene	Gm18943	ENSMUST00000207357	processed_pseudogene		7	-1	99248820	1216
ENSMUSG00000032554	protein_coding	Trf	ENSMUST00000164377	nonsense_mediated_decay		9	-1	103230270	634
ENSMUSG00000022235	protein_coding	Cmbl	ENSMUST00000161088	protein_coding		15	1	31572105	524
ENSMUSG00000066148	protein_coding	Prpf4	ENSMUST00000148774	processed_transcript		4	1	62421844	912
ENSMUSG00000097015	lincRNA	Gm26705	ENSMUST00000180761	lincRNA		7	-1	99267218	1457
ENSMUSG00000032554	protein_coding	Trf	ENSMUST00000112503	retained_intron		9	-1	103222675	775
ENSMUSG00000032554	protein_coding	Trf	ENSMUST00000165296	protein_coding		9	-1	103230266	563
ENSMUSG00000100127	transcribed_unprocessed_pseudogene	Gsdmcl-ps	ENSMUST00000185574	processed_transcript		15	1	63914461	1932
ENSMUSG00000100127	transcribed_unprocessed_pseudogene	Gsdmcl-ps	ENSMUST00000188367	transcribed_unprocessed_pseudogene		15	1	63915780	1375
ENSMUSG00000030291	protein_coding	Med21	ENSMUST00000032429	protein_coding		6	1	146642547	814
ENSMUSG00000046861	protein_coding	Hectd3	ENSMUST00000050067	protein_coding	principal1	4	1	116995317	4583
ENSMUSG00000032554	protein_coding	Trf	ENSMUST00000126359	protein_coding		9	-1	103228442	791
ENSMUSG00000100127	transcribed_unprocessed_pseudogene	Gsdmcl-ps	ENSMUST00000188344	retained_intron		15	1	63922277	332
ENSMUSG00000046861	protein_coding	Hectd3	ENSMUST00000155267	retained_intron		4	1	116998537	705
ENSMUSG00000098649	antisense	Gm27199	ENSMUST00000185026	antisense		5	-1	120431767	623
ENSMUSG00000022370	protein_coding	Mrpl13	ENSMUST00000164542	nonsense_mediated_decay		15	-1	55557349	730
ENSMUSG00000046861	protein_coding	Hectd3	ENSMUST00000133234	retained_intron		4	1	117002856	400
ENSMUSG00000021439	protein_coding	Ctsq	ENSMUST00000021888	protein_coding	principal1	13	-1	61040631	1378
ENSMUSG00000086890	antisense	1700021J08Rik	ENSMUST00000138729	antisense		4	-1	117003012	575
ENSMUSG00000030357	protein_coding	Fkbp4	ENSMUST00000032508	protein_coding	principal1	6	-1	128438677	2217
ENSMUSG00000030291	protein_coding	Med21	ENSMUST00000125539	processed_transcript		6	1	146642547	699
ENSMUSG00000030291	protein_coding	Med21	ENSMUST00000203416	retained_intron		6	1	146642579	1395
ENSMUSG00000021439	protein_coding	Ctsq	ENSMUST00000144401	retained_intron		13	-1	61038187	1152
ENSMUSG00000030291	protein_coding	Med21	ENSMUST00000111650	protein_coding	principal1	6	1	146642580	572
ENSMUSG00000036095	protein_coding	Dgkb	ENSMUST00000221540	processed_transcript		12	1	37880547	3472
ENSMUSG00000030291	protein_coding	Med21	ENSMUST00000134387	processed_transcript		6	1	146642581	689
ENSMUSG00000060724	protein_coding	Vmn1r47	ENSMUST00000227811	protein_coding	principal1	6	1	90016147	6792
ENSMUSG00000060724	protein_coding	Vmn1r47	ENSMUST00000228680	protein_coding	principal1	6	1	90016147	6717
ENSMUSG00000030291	protein_coding	Med21	ENSMUST00000204040	nonsense_mediated_decay		6	1	146642591	623
ENSMUSG00000030357	protein_coding	Fkbp4	ENSMUST00000150387	protein_coding		6	-1	128438140	891
ENSMUSG00000060724	protein_coding	Vmn1r47	ENSMUST00000227229	protein_coding	principal1	6	1	90016147	6733
ENSMUSG00000030291	protein_coding	Med21	ENSMUST00000075077	retained_intron		6	1	146647160	1713
ENSMUSG00000042216	protein_coding	Sgsm1	ENSMUST00000048112	protein_coding	principal1	5	-1	113310786	5161
ENSMUSG00000030357	protein_coding	Fkbp4	ENSMUST00000151796	protein_coding		6	-1	128437653	642
ENSMUSG00000036095	protein_coding	Dgkb	ENSMUST00000040500	protein_coding	principal1	12	1	37880705	6373
ENSMUSG00000087444	protein_coding	Gm5475	ENSMUST00000132119	protein_coding	principal5	15	1	100422147	2608
ENSMUSG00000060724	protein_coding	Vmn1r47	ENSMUST00000074881	protein_coding	principal1	6	1	90021888	933
ENSMUSG00000112905	TEC	Gm47477	ENSMUST00000219940	TEC		10	-1	108956488	3132
ENSMUSG00000094652	IG_V_gene	Ighv1-42	ENSMUST00000191868	IG_V_gene		12	-1	114937544	351
ENSMUSG00000036095	protein_coding	Dgkb	ENSMUST00000221098	processed_transcript		12	1	37880716	2947
ENSMUSG00000042216	protein_coding	Sgsm1	ENSMUST00000057209	protein_coding		5	-1	113280601	4339
ENSMUSG00000036095	protein_coding	Dgkb	ENSMUST00000221686	retained_intron		12	1	38017714	2061
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000107912	protein_coding	principal3	7	-1	44553686	1839
ENSMUSG00000094652	IG_V_gene	Ighv1-42	ENSMUST00000103516	IG_V_gene	principal1	12	-1	114937406	294
ENSMUSG00000087444	protein_coding	Gm5475	ENSMUST00000148928	protein_coding	alternative2	15	1	100423193	2320
ENSMUSG00000025173	protein_coding	Wdr45b	ENSMUST00000026173	protein_coding	principal1	11	-1	121354445	2321
ENSMUSG00000025127	protein_coding	Gcgr	ENSMUST00000026119	protein_coding	principal1	11	1	120530699	1957
ENSMUSG00000036095	protein_coding	Dgkb	ENSMUST00000220606	processed_transcript		12	1	38019180	2240
ENSMUSG00000113608	antisense	Gm48715	ENSMUST00000221127	antisense		12	-1	38075735	549
ENSMUSG00000095859	IG_V_gene	Ighv1-43	ENSMUST00000195417	IG_V_gene		12	-1	114946383	351
ENSMUSG00000095859	IG_V_gene	Ighv1-43	ENSMUST00000103517	IG_V_gene	principal1	12	-1	114946243	294
ENSMUSG00000029595	protein_coding	Lhx5	ENSMUST00000031591	protein_coding	principal1	5	1	120431699	2689
ENSMUSG00000116942	processed_pseudogene	Gm49744	ENSMUST00000231625	processed_pseudogene		16	-1	20566028	452
ENSMUSG00000025173	protein_coding	Wdr45b	ENSMUST00000137230	processed_transcript		11	-1	121341188	918
ENSMUSG00000083848	processed_pseudogene	Gm7309	ENSMUST00000121670	processed_pseudogene		6	-1	129690198	581
ENSMUSG00000025173	protein_coding	Wdr45b	ENSMUST00000106110	protein_coding		11	-1	121354341	702
ENSMUSG00000116604	lincRNA	Gm49745	ENSMUST00000231640	lincRNA		16	1	20566358	2151
ENSMUSG00000107715	TEC	Gm44135	ENSMUST00000205221	TEC		6	-1	129696485	368
ENSMUSG00000025173	protein_coding	Wdr45b	ENSMUST00000136797	protein_coding		11	-1	121354393	616
ENSMUSG00000116538	processed_pseudogene	Gm49746	ENSMUST00000231937	processed_pseudogene		16	1	20571410	273
ENSMUSG00000026815	protein_coding	Gfi1b	ENSMUST00000028156	protein_coding	principal3	2	-1	28621945	1681
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000023489	protein_coding	principal1	16	1	32877781	4312
ENSMUSG00000112967	antisense	4930428E07Rik	ENSMUST00000222132	antisense		12	-1	38614521	920
ENSMUSG00000116808	processed_pseudogene	Gm20164	ENSMUST00000231553	processed_pseudogene		16	1	20583109	316
ENSMUSG00000074886	protein_coding	Grk6	ENSMUST00000224653	protein_coding		13	1	55445072	2976
ENSMUSG00000112967	antisense	4930428E07Rik	ENSMUST00000222922	antisense		12	-1	38614521	3799
ENSMUSG00000025173	protein_coding	Wdr45b	ENSMUST00000127373	retained_intron		11	-1	121354401	2455
ENSMUSG00000026815	protein_coding	Gfi1b	ENSMUST00000155686	processed_transcript		2	-1	28615405	238
ENSMUSG00000113248	processed_pseudogene	Gm18338	ENSMUST00000222381	processed_pseudogene		12	-1	38369230	560
ENSMUSG00000036285	protein_coding	Noa1	ENSMUST00000047860	protein_coding	principal1	5	-1	77310084	2288
ENSMUSG00000049123	protein_coding	Catsperg2	ENSMUST00000208607	nonsense_mediated_decay		7	-1	29726996	4455
ENSMUSG00000113154	TEC	Gm48713	ENSMUST00000220862	TEC		12	1	37938463	2846
ENSMUSG00000076823	TR_V_gene	Trav13n-4	ENSMUST00000196105	TR_V_gene		14	1	53362267	432
ENSMUSG00000076823	TR_V_gene	Trav13n-4	ENSMUST00000103634	TR_V_gene	principal1	14	1	53363836	267
ENSMUSG00000036285	protein_coding	Noa1	ENSMUST00000150451	processed_transcript		5	-1	77304315	577
ENSMUSG00000026815	protein_coding	Gfi1b	ENSMUST00000145690	processed_transcript		2	-1	28621982	357
ENSMUSG00000036285	protein_coding	Noa1	ENSMUST00000150722	retained_intron		5	-1	77310059	2815
ENSMUSG00000076824	TR_V_gene	Trav14n-3	ENSMUST00000103652	TR_V_gene		14	1	53370077	361
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000171325	protein_coding		16	1	32877789	1792
ENSMUSG00000022370	protein_coding	Mrpl13	ENSMUST00000172387	protein_coding	principal1	15	-1	55557748	1223
ENSMUSG00000036285	protein_coding	Noa1	ENSMUST00000139435	processed_transcript		5	-1	77307643	393
ENSMUSG00000076824	TR_V_gene	Trav14n-3	ENSMUST00000103635	TR_V_gene	principal1	14	1	53370296	280
ENSMUSG00000099825	lincRNA	1810012K16Rik	ENSMUST00000190830	lincRNA		8	1	22398721	547
ENSMUSG00000042216	protein_coding	Sgsm1	ENSMUST00000147856	processed_transcript		5	-1	113280601	3012
ENSMUSG00000026815	protein_coding	Gfi1b	ENSMUST00000164290	protein_coding	alternative2	2	-1	28621982	1822
ENSMUSG00000067610	protein_coding	Klri1	ENSMUST00000088046	protein_coding	principal1	6	-1	129717132	838
ENSMUSG00000110193	processed_pseudogene	Gm45452	ENSMUST00000210905	processed_pseudogene		8	-1	22402752	177
ENSMUSG00000022370	protein_coding	Mrpl13	ENSMUST00000165356	protein_coding		15	-1	55548164	687
ENSMUSG00000109938	processed_pseudogene	Gm6009	ENSMUST00000210848	processed_pseudogene		8	1	22407542	280
ENSMUSG00000110129	TEC	Gm45453	ENSMUST00000211758	TEC		8	1	22410457	853
ENSMUSG00000035283	protein_coding	Adrb1	ENSMUST00000038949	protein_coding	principal1	19	1	56722199	2952
ENSMUSG00000022370	protein_coding	Mrpl13	ENSMUST00000107207	retained_intron		15	-1	55557283	664
ENSMUSG00000022370	protein_coding	Mrpl13	ENSMUST00000170135	retained_intron		15	-1	55557275	6008
ENSMUSG00000035283	protein_coding	Adrb1	ENSMUST00000236875	processed_transcript		19	1	56723863	494
ENSMUSG00000025127	protein_coding	Gcgr	ENSMUST00000147877	processed_transcript		11	1	120530744	2004
ENSMUSG00000031130	protein_coding	Brs3	ENSMUST00000033464	protein_coding	principal1	X	1	57043074	2772
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000084954	protein_coding		11	1	70432637	1732
ENSMUSG00000059659	antisense	Gm10069	ENSMUST00000144745	antisense		6	1	128438757	3694
ENSMUSG00000057592	protein_coding	Vmn1r48	ENSMUST00000073415	protein_coding	principal1	6	-1	90036841	909
ENSMUSG00000105548	TR_V_pseudogene	Trav15n-3	ENSMUST00000200498	TR_V_pseudogene		14	1	53375112	168
ENSMUSG00000059659	antisense	Gm10069	ENSMUST00000204081	antisense		6	1	128439339	907
ENSMUSG00000025127	protein_coding	Gcgr	ENSMUST00000128827	processed_transcript		11	1	120530774	2502
ENSMUSG00000059659	antisense	Gm10069	ENSMUST00000204037	antisense		6	1	128473590	677
ENSMUSG00000107505	processed_pseudogene	Stambp-ps1	ENSMUST00000203239	processed_pseudogene		6	-1	128448398	1016
ENSMUSG00000107896	processed_pseudogene	Gm8719	ENSMUST00000203602	processed_pseudogene		6	-1	128473388	534
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000231751	retained_intron		16	1	32877807	1671
ENSMUSG00000117696	lincRNA	Gm50100	ENSMUST00000235628	lincRNA		19	-1	56746913	987
ENSMUSG00000025127	protein_coding	Gcgr	ENSMUST00000143063	processed_transcript		11	1	120534680	674
ENSMUSG00000117696	lincRNA	Gm50100	ENSMUST00000237116	lincRNA		19	-1	56746764	378
ENSMUSG00000042216	protein_coding	Sgsm1	ENSMUST00000145708	processed_transcript		5	-1	113310777	3177
ENSMUSG00000040234	protein_coding	Tm7sf3	ENSMUST00000037709	protein_coding	principal1	6	-1	146634597	3241
ENSMUSG00000092450	unprocessed_pseudogene	Vmn1r-ps31	ENSMUST00000174112	unprocessed_pseudogene		6	-1	90056646	238
ENSMUSG00000045528	protein_coding	Olfr891	ENSMUST00000062535	protein_coding	principal1	9	-1	38180821	951
ENSMUSG00000092588	unprocessed_pseudogene	Gm20534	ENSMUST00000172957	unprocessed_pseudogene		6	1	90056626	172
ENSMUSG00000029122	protein_coding	Evc	ENSMUST00000114154	protein_coding	alternative2	5	-1	37333566	3695
ENSMUSG00000042216	protein_coding	Sgsm1	ENSMUST00000112325	protein_coding		5	-1	113310739	2274
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000232300	retained_intron		16	1	32877807	2262
ENSMUSG00000040234	protein_coding	Tm7sf3	ENSMUST00000127529	nonsense_mediated_decay		6	-1	146634498	769
ENSMUSG00000042216	protein_coding	Sgsm1	ENSMUST00000154248	protein_coding		5	-1	113310697	2123
ENSMUSG00000030216	protein_coding	Wbp11	ENSMUST00000116514	protein_coding	principal1	6	-1	136828233	2739
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000149183	retained_intron		16	1	32877813	634
ENSMUSG00000021175	protein_coding	Cdca7l	ENSMUST00000176499	processed_transcript		12	1	117804289	478
ENSMUSG00000042216	protein_coding	Sgsm1	ENSMUST00000112324	protein_coding		5	-1	113280587	1102
ENSMUSG00000030216	protein_coding	Wbp11	ENSMUST00000204129	protein_coding		6	-1	136821214	427
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000145146	processed_transcript		16	1	32877813	620
ENSMUSG00000040234	protein_coding	Tm7sf3	ENSMUST00000138476	processed_transcript		6	-1	146642814	412
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000141590	retained_intron		16	1	32877851	1015
ENSMUSG00000042216	protein_coding	Sgsm1	ENSMUST00000156340	retained_intron		5	-1	113279336	490
ENSMUSG00000049123	protein_coding	Catsperg2	ENSMUST00000209126	protein_coding	principal1	7	-1	29725469	3438
ENSMUSG00000040234	protein_coding	Tm7sf3	ENSMUST00000147027	processed_transcript		6	-1	146642824	552
ENSMUSG00000030216	protein_coding	Wbp11	ENSMUST00000204272	nonsense_mediated_decay		6	-1	136828136	905
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000232272	protein_coding		16	1	32878130	1852
ENSMUSG00000042216	protein_coding	Sgsm1	ENSMUST00000138266	retained_intron		5	-1	113282892	380
ENSMUSG00000084291	processed_pseudogene	Gm6654	ENSMUST00000118950	processed_pseudogene		6	-1	146647588	348
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000120345	protein_coding		16	1	32882982	648
ENSMUSG00000042216	protein_coding	Sgsm1	ENSMUST00000140981	retained_intron		5	-1	113310720	632
ENSMUSG00000037010	protein_coding	Apln	ENSMUST00000039026	protein_coding	principal1	X	-1	48034853	3149
ENSMUSG00000030216	protein_coding	Wbp11	ENSMUST00000151333	retained_intron		6	-1	136828143	2339
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000125843	processed_transcript		16	1	32895091	514
ENSMUSG00000030216	protein_coding	Wbp11	ENSMUST00000141598	retained_intron		6	-1	136828135	779
ENSMUSG00000047794	protein_coding	Olfr685	ENSMUST00000214712	protein_coding	alternative2	7	-1	105186012	3326
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000135854	retained_intron		16	1	32898750	563
ENSMUSG00000047794	protein_coding	Olfr685	ENSMUST00000217432	protein_coding	alternative2	7	-1	105186012	3246
ENSMUSG00000047794	protein_coding	Olfr685	ENSMUST00000209409	protein_coding	alternative2	7	-1	105186012	3179
ENSMUSG00000052533	protein_coding	Nup188	ENSMUST00000064447	protein_coding	principal1	2	1	30286397	5710
ENSMUSG00000030216	protein_coding	Wbp11	ENSMUST00000129078	retained_intron		6	-1	136826095	536
ENSMUSG00000098147	processed_pseudogene	Gm17798	ENSMUST00000182282	processed_pseudogene		9	1	38184793	1035
ENSMUSG00000047794	protein_coding	Olfr685	ENSMUST00000051355	protein_coding	principal2	7	-1	105181400	1088
ENSMUSG00000030216	protein_coding	Wbp11	ENSMUST00000146348	protein_coding		6	-1	136827736	312
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000137863	retained_intron		16	1	32900224	718
ENSMUSG00000057726	protein_coding	Serpinb9g	ENSMUST00000081927	protein_coding	principal1	13	1	33484790	1927
ENSMUSG00000022800	protein_coding	Fyttd1	ENSMUST00000127493	retained_intron		16	1	32902099	520
ENSMUSG00000035629	protein_coding	Rubcn	ENSMUST00000140229	retained_intron		16	-1	32824920	2982
ENSMUSG00000040747	protein_coding	Cd53	ENSMUST00000038845	protein_coding	principal1	3	-1	106790149	1742
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000108568	protein_coding		11	1	70432637	1777
ENSMUSG00000052533	protein_coding	Nup188	ENSMUST00000156023	processed_transcript		2	1	30286417	356
ENSMUSG00000052533	protein_coding	Nup188	ENSMUST00000138666	protein_coding		2	1	30286424	534
ENSMUSG00000052533	protein_coding	Nup188	ENSMUST00000113634	protein_coding		2	1	30286427	534
ENSMUSG00000049123	protein_coding	Catsperg2	ENSMUST00000208371	nonsense_mediated_decay		7	-1	29725250	2338
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000079056	protein_coding		11	1	70432645	1443
ENSMUSG00000049123	protein_coding	Catsperg2	ENSMUST00000207115	nonsense_mediated_decay		7	-1	29726995	3362
ENSMUSG00000063320	protein_coding	1190007I07Rik	ENSMUST00000176200	protein_coding	principal1	10	-1	82622926	586
ENSMUSG00000042211	protein_coding	Fbxo38	ENSMUST00000048688	protein_coding	principal1	18	-1	62548695	4254
ENSMUSG00000052533	protein_coding	Nup188	ENSMUST00000133603	retained_intron		2	1	30286429	2511
ENSMUSG00000029122	protein_coding	Evc	ENSMUST00000031005	protein_coding	principal2	5	-1	37336894	4325
ENSMUSG00000052533	protein_coding	Nup188	ENSMUST00000133421	retained_intron		2	1	30342940	985
ENSMUSG00000085990	processed_transcript	Gm16731	ENSMUST00000132432	processed_transcript		4	1	46535901	922
ENSMUSG00000049123	protein_coding	Catsperg2	ENSMUST00000207483	retained_intron		7	-1	29727015	2697
ENSMUSG00000049123	protein_coding	Catsperg2	ENSMUST00000207251	retained_intron		7	-1	29725482	2207
ENSMUSG00000029122	protein_coding	Evc	ENSMUST00000146568	protein_coding		5	-1	37307229	1090
ENSMUSG00000042211	protein_coding	Fbxo38	ENSMUST00000236904	retained_intron		18	-1	62530771	2951
ENSMUSG00000049123	protein_coding	Catsperg2	ENSMUST00000208345	retained_intron		7	-1	29725639	1299
ENSMUSG00000100747	antisense	1700084E18Rik	ENSMUST00000187343	antisense		2	-1	30238223	1429
ENSMUSG00000042211	protein_coding	Fbxo38	ENSMUST00000237378	retained_intron		18	-1	62520729	638
ENSMUSG00000100747	antisense	1700084E18Rik	ENSMUST00000205624	pseudogene		2	-1	30238223	729
ENSMUSG00000049123	protein_coding	Catsperg2	ENSMUST00000207130	processed_transcript		7	-1	29727032	1095
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000102564	protein_coding	principal1	11	1	70432653	1848
ENSMUSG00000049123	protein_coding	Catsperg2	ENSMUST00000061193	protein_coding	principal1	7	-1	29727015	3957
ENSMUSG00000042211	protein_coding	Fbxo38	ENSMUST00000235807	protein_coding		18	-1	62548684	757
ENSMUSG00000029122	protein_coding	Evc	ENSMUST00000149890	retained_intron		5	-1	37312364	1692
ENSMUSG00000029122	protein_coding	Evc	ENSMUST00000139550	protein_coding		5	-1	37301613	496
ENSMUSG00000063851	protein_coding	Rnf183	ENSMUST00000107455	protein_coding	principal1	4	-1	62435252	1432
ENSMUSG00000029122	protein_coding	Evc	ENSMUST00000114148	protein_coding	alternative2	5	-1	37336866	2119
ENSMUSG00000022763	protein_coding	Aifm3	ENSMUST00000115685	protein_coding	alternative2	16	1	17489611	2357
ENSMUSG00000043832	protein_coding	Clec4a3	ENSMUST00000117173	protein_coding	principal1	6	1	122952515	1165
ENSMUSG00000029122	protein_coding	Evc	ENSMUST00000154885	retained_intron		5	-1	37318372	382
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000124943	protein_coding		11	1	70432677	662
ENSMUSG00000063851	protein_coding	Rnf183	ENSMUST00000107454	protein_coding	principal1	4	-1	62434726	1407
ENSMUSG00000029122	protein_coding	Evc	ENSMUST00000124426	retained_intron		5	-1	37318491	537
ENSMUSG00000063851	protein_coding	Rnf183	ENSMUST00000079420	protein_coding	principal1	4	-1	62428559	573
ENSMUSG00000063320	protein_coding	1190007I07Rik	ENSMUST00000079648	protein_coding	principal1	10	-1	82623196	716
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000150076	protein_coding		11	1	70432682	370
ENSMUSG00000099041	protein_coding	Gm28035	ENSMUST00000139454	nonsense_mediated_decay	principal1	2	1	30240567	4238
ENSMUSG00000043832	protein_coding	Clec4a3	ENSMUST00000088468	protein_coding	principal1	6	1	122952644	1300
ENSMUSG00000021175	protein_coding	Cdca7l	ENSMUST00000021592	protein_coding	principal1	12	1	117843515	2957
ENSMUSG00000029122	protein_coding	Evc	ENSMUST00000133376	retained_intron		5	-1	37336878	2228
ENSMUSG00000107307	processed_pseudogene	Gm42935	ENSMUST00000202004	processed_pseudogene		5	-1	37297780	151
ENSMUSG00000063320	protein_coding	1190007I07Rik	ENSMUST00000185168	protein_coding	principal1	10	-1	82623228	469
ENSMUSG00000074886	protein_coding	Grk6	ENSMUST00000001115	protein_coding		13	1	55445338	2994
ENSMUSG00000007659	protein_coding	Bcl2l1	ENSMUST00000007803	protein_coding	principal1	2	-1	152831728	2417
ENSMUSG00000022763	protein_coding	Aifm3	ENSMUST00000023448	protein_coding	principal3	16	1	17489663	2688
ENSMUSG00000043832	protein_coding	Clec4a3	ENSMUST00000204427	protein_coding		6	1	122952778	417
ENSMUSG00000075419	protein_coding	Dolk	ENSMUST00000100219	protein_coding	principal1	2	-1	30286334	2104
ENSMUSG00000046341	processed_pseudogene	Gm11223	ENSMUST00000120560	processed_pseudogene		4	-1	69926079	450
ENSMUSG00000063320	protein_coding	1190007I07Rik	ENSMUST00000183363	protein_coding	principal1	10	-1	82623190	406
ENSMUSG00000074886	protein_coding	Grk6	ENSMUST00000224995	protein_coding		13	1	55445346	2971
ENSMUSG00000007659	protein_coding	Bcl2l1	ENSMUST00000173755	processed_transcript		2	-1	152828535	961
ENSMUSG00000087432	antisense	Gm15123	ENSMUST00000138988	antisense		10	1	80371898	339
ENSMUSG00000021175	protein_coding	Cdca7l	ENSMUST00000176735	protein_coding		12	1	117843884	729
ENSMUSG00000084342	processed_pseudogene	Gm11224	ENSMUST00000120465	processed_pseudogene		4	-1	69955276	1111
ENSMUSG00000063320	protein_coding	1190007I07Rik	ENSMUST00000183416	protein_coding		10	-1	82623137	637
ENSMUSG00000084892	processed_transcript	Gm14471	ENSMUST00000141035	processed_transcript		2	-1	30323986	2358
ENSMUSG00000021175	protein_coding	Cdca7l	ENSMUST00000177339	protein_coding		12	1	117843888	972
ENSMUSG00000085712	antisense	Gm15124	ENSMUST00000142053	antisense		10	1	80371955	953
ENSMUSG00000093544	processed_pseudogene	Gm20613	ENSMUST00000175828	processed_pseudogene		12	-1	117834351	345
ENSMUSG00000074886	protein_coding	Grk6	ENSMUST00000225925	protein_coding		13	1	55445457	2769
ENSMUSG00000007659	protein_coding	Bcl2l1	ENSMUST00000134902	protein_coding		2	-1	152830641	2232
ENSMUSG00000112648	processed_pseudogene	Gm47793	ENSMUST00000218129	processed_pseudogene		10	-1	80377552	386
ENSMUSG00000098794	protein_coding	Gm28038	ENSMUST00000143119	protein_coding	principal1	2	1	30281043	378
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000128748	nonsense_mediated_decay		11	1	70432682	957
ENSMUSG00000076439	protein_coding	Mog	ENSMUST00000102665	protein_coding	principal2	17	-1	37023398	1704
ENSMUSG00000050896	protein_coding	Rtn4rl2	ENSMUST00000151799	protein_coding		2	-1	84886710	1303
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000102563	protein_coding	principal1	11	1	70432698	1352
ENSMUSG00000039853	protein_coding	Trim14	ENSMUST00000184112	nonsense_mediated_decay		4	-1	46536122	2653
ENSMUSG00000076439	protein_coding	Mog	ENSMUST00000167275	protein_coding	alternative2	17	-1	37023199	627
ENSMUSG00000007659	protein_coding	Bcl2l1	ENSMUST00000140436	protein_coding		2	-1	152830310	1865
ENSMUSG00000050896	protein_coding	Rtn4rl2	ENSMUST00000151759	processed_transcript		2	-1	84886476	550
ENSMUSG00000110431	polymorphic_pseudogene	Olfr892-ps1	ENSMUST00000211998	polymorphic_pseudogene	principal1	9	1	38189727	932
ENSMUSG00000093427	processed_pseudogene	Gm18513	ENSMUST00000177313	processed_pseudogene		10	1	52189248	560
ENSMUSG00000050896	protein_coding	Rtn4rl2	ENSMUST00000054514	protein_coding	principal1	2	-1	84886692	1263
ENSMUSG00000074886	protein_coding	Grk6	ENSMUST00000099482	protein_coding	principal2	13	1	55445461	2169
ENSMUSG00000093901	protein_coding	Olfr893	ENSMUST00000211975	protein_coding	alternative2	9	1	38208365	2924
ENSMUSG00000007659	protein_coding	Bcl2l1	ENSMUST00000128172	protein_coding		2	-1	152831112	1403
ENSMUSG00000039853	protein_coding	Trim14	ENSMUST00000136978	processed_transcript		4	-1	46534414	906
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000172912	protein_coding	alternative2	17	-1	34000289	1570
ENSMUSG00000093901	protein_coding	Olfr893	ENSMUST00000212815	protein_coding		9	1	38209212	674
ENSMUSG00000074886	protein_coding	Grk6	ENSMUST00000224118	protein_coding	alternative2	13	1	55445461	1997
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000138006	retained_intron		11	1	70436699	1073
ENSMUSG00000093901	protein_coding	Olfr893	ENSMUST00000093867	protein_coding	principal2	9	1	38209052	942
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000125441	retained_intron		11	1	70436903	756
ENSMUSG00000074886	protein_coding	Grk6	ENSMUST00000224532	retained_intron		13	1	55458239	753
ENSMUSG00000007659	protein_coding	Bcl2l1	ENSMUST00000134357	protein_coding		2	-1	152830652	686
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000143232	retained_intron		11	1	70437292	603
ENSMUSG00000024817	protein_coding	Uhrf2	ENSMUST00000134518	retained_intron		19	1	30030513	3231
ENSMUSG00000030359	protein_coding	Pzp	ENSMUST00000112132	protein_coding	principal1	6	-1	128526720	4681
ENSMUSG00000002059	protein_coding	Rab34	ENSMUST00000002128	protein_coding	principal1	11	1	78188430	1368
ENSMUSG00000060216	protein_coding	Arrb2	ENSMUST00000144454	retained_intron		11	1	70438582	488
ENSMUSG00000007659	protein_coding	Bcl2l1	ENSMUST00000146380	protein_coding		2	-1	152830618	653
ENSMUSG00000118454	protein_coding	Wdr88	ENSMUST00000238407	protein_coding	principal1	7	-1	35275533	1944
ENSMUSG00000002059	protein_coding	Rab34	ENSMUST00000150941	protein_coding		11	1	78188440	795
ENSMUSG00000059639	protein_coding	Clec4a4	ENSMUST00000079379	protein_coding	principal1	6	1	122990367	776
ENSMUSG00000024817	protein_coding	Uhrf2	ENSMUST00000137368	retained_intron		19	1	30030513	3342
ENSMUSG00000030359	protein_coding	Pzp	ENSMUST00000204291	processed_transcript		6	-1	128487855	450
ENSMUSG00000007659	protein_coding	Bcl2l1	ENSMUST00000156688	protein_coding		2	-1	152831710	472
ENSMUSG00000030359	protein_coding	Pzp	ENSMUST00000203753	retained_intron		6	-1	128495223	1876
ENSMUSG00000082468	processed_pseudogene	Gm12980	ENSMUST00000118912	processed_pseudogene		4	1	129379844	336
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000114311	retained_intron		17	-1	34000283	1874
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000236740	protein_coding	alternative2	17	-1	34000305	1567
ENSMUSG00000029376	protein_coding	Mthfd2l	ENSMUST00000202852	processed_transcript		5	1	90931117	4148
ENSMUSG00000030359	protein_coding	Pzp	ENSMUST00000143664	protein_coding		6	-1	128526703	740
ENSMUSG00000093483	processed_transcript	AA465934	ENSMUST00000177150	lincRNA		11	1	83291699	383
ENSMUSG00000002059	protein_coding	Rab34	ENSMUST00000108322	protein_coding	principal1	11	1	78188779	1685
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000236469	protein_coding		17	-1	33997485	831
ENSMUSG00000029376	protein_coding	Mthfd2l	ENSMUST00000202781	protein_coding		5	1	90931256	688
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000073488	protein_coding	principal3	7	-1	44553949	1999
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000173602	retained_intron		17	-1	33997755	1590
ENSMUSG00000093483	processed_transcript	AA465934	ENSMUST00000176545	lincRNA		11	1	83291720	356
ENSMUSG00000007659	protein_coding	Bcl2l1	ENSMUST00000109820	protein_coding	principal1	2	-1	152830666	2568
ENSMUSG00000103300	IG_V_pseudogene	Ighv1-44	ENSMUST00000195597	IG_V_pseudogene		12	-1	114963813	352
ENSMUSG00000093483	processed_transcript	AA465934	ENSMUST00000177248	retained_intron		11	1	83291728	431
ENSMUSG00000096417	TR_V_gene	Trav7-2	ENSMUST00000103636	TR_V_gene	principal1	14	1	53390635	336
ENSMUSG00000102528	IG_V_pseudogene	Ighv1-45	ENSMUST00000193677	IG_V_pseudogene		12	-1	114970488	352
ENSMUSG00000093483	processed_transcript	AA465934	ENSMUST00000177533	lincRNA		11	1	83291742	308
ENSMUSG00000002059	protein_coding	Rab34	ENSMUST00000056241	protein_coding		11	1	78188879	1558
ENSMUSG00000022763	protein_coding	Aifm3	ENSMUST00000231508	retained_intron		16	1	17489847	3510
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000129404	protein_coding	alternative2	10	1	73821883	6857
ENSMUSG00000002059	protein_coding	Rab34	ENSMUST00000207728	protein_coding		11	1	78188922	567
ENSMUSG00000093483	processed_transcript	AA465934	ENSMUST00000176016	retained_intron		11	1	83291743	471
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000131321	protein_coding	alternative2	10	1	73821883	6926
ENSMUSG00000076826	TR_V_gene	Trav4-2	ENSMUST00000103637	TR_V_gene	principal1	14	1	53418349	370
ENSMUSG00000102928	IG_V_pseudogene	Ighv1-46	ENSMUST00000193988	IG_V_pseudogene		12	-1	114978126	351
ENSMUSG00000002059	protein_coding	Rab34	ENSMUST00000148603	retained_intron		11	1	78189240	420
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000126920	protein_coding	alternative2	10	1	73821883	6866
ENSMUSG00000102193	processed_pseudogene	Gm7299	ENSMUST00000194441	processed_pseudogene		1	1	170630921	581
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000147189	protein_coding	alternative2	10	1	73821883	6806
ENSMUSG00000002059	protein_coding	Rab34	ENSMUST00000126864	retained_intron		11	1	78189588	880
ENSMUSG00000039853	protein_coding	Trim14	ENSMUST00000046897	protein_coding	principal1	4	-1	46536141	1429
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000163884	protein_coding	principal1	16	1	38558698	1645
ENSMUSG00000048696	protein_coding	Mex3d	ENSMUST00000105350	protein_coding	principal1	10	-1	80387659	3266
ENSMUSG00000022763	protein_coding	Aifm3	ENSMUST00000231800	retained_intron		16	1	17499699	1790
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000105424	protein_coding	alternative2	10	1	73821883	6932
ENSMUSG00000076709	IG_V_gene	Ighv1-47	ENSMUST00000194865	IG_V_gene		12	-1	114991580	397
ENSMUSG00000022763	protein_coding	Aifm3	ENSMUST00000232359	retained_intron		16	1	17502242	642
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000092420	protein_coding	alternative2	10	1	73821883	6917
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000025181	protein_coding	principal3	17	-1	34000347	1619
ENSMUSG00000076709	IG_V_gene	Ighv1-47	ENSMUST00000103518	IG_V_gene	principal1	12	-1	114991401	294
ENSMUSG00000002059	protein_coding	Rab34	ENSMUST00000156435	protein_coding		11	1	78190130	950
ENSMUSG00000029376	protein_coding	Mthfd2l	ENSMUST00000071652	protein_coding	principal1	5	1	90931280	2159
ENSMUSG00000022763	protein_coding	Aifm3	ENSMUST00000232421	retained_intron		16	1	17502892	601
ENSMUSG00000103990	IG_V_pseudogene	Ighv8-3	ENSMUST00000194985	IG_V_pseudogene		12	-1	115003712	295
ENSMUSG00000094220	TR_V_gene	Trav6-3	ENSMUST00000180549	TR_V_gene		14	1	53428711	388
ENSMUSG00000048696	protein_coding	Mex3d	ENSMUST00000123141	protein_coding		10	-1	80381987	1358
ENSMUSG00000002059	protein_coding	Rab34	ENSMUST00000154542	retained_intron		11	1	78190353	352
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000238021	retained_intron		17	-1	33996674	457
ENSMUSG00000039853	protein_coding	Trim14	ENSMUST00000142502	processed_transcript		4	-1	46534442	670
ENSMUSG00000094220	TR_V_gene	Trav6-3	ENSMUST00000183604	TR_V_gene	principal1	14	1	53430073	305
ENSMUSG00000039853	protein_coding	Trim14	ENSMUST00000102924	protein_coding		4	-1	46536114	1582
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000173543	retained_intron		17	-1	33997157	637
ENSMUSG00000029376	protein_coding	Mthfd2l	ENSMUST00000201851	retained_intron		5	1	90946774	611
ENSMUSG00000083182	processed_pseudogene	Gm13828	ENSMUST00000122278	processed_pseudogene		5	1	115198343	363
ENSMUSG00000039853	protein_coding	Trim14	ENSMUST00000142606	processed_transcript		4	-1	46534604	377
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000235463	protein_coding		17	-1	33999327	643
ENSMUSG00000096355	IG_V_gene	Ighv8-4	ENSMUST00000192298	IG_V_gene		12	-1	115024459	351
ENSMUSG00000096355	IG_V_gene	Ighv8-4	ENSMUST00000178949	IG_V_gene	principal1	12	-1	115024319	294
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000087189	protein_coding		17	-1	34000257	579
ENSMUSG00000043529	protein_coding	Olfr266	ENSMUST00000213616	protein_coding	principal1	3	-1	106826287	2195
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000107911	protein_coding	alternative2	7	-1	44553948	1988
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000238098	protein_coding		17	-1	34000251	1065
ENSMUSG00000102453	IG_V_pseudogene	Ighv1-48	ENSMUST00000191795	IG_V_pseudogene		12	-1	115038520	294
ENSMUSG00000112067	TEC	Gm48015	ENSMUST00000217888	TEC		12	1	95734110	1300
ENSMUSG00000043529	protein_coding	Olfr266	ENSMUST00000216610	protein_coding	principal1	3	-1	106824903	1520
ENSMUSG00000112756	TEC	Gm48014	ENSMUST00000219810	TEC		12	1	95724956	1300
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000208322	protein_coding		7	-1	44552245	1450
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000173317	retained_intron		17	-1	33997910	1014
ENSMUSG00000035864	protein_coding	Syt1	ENSMUST00000105276	protein_coding	principal1	10	-1	109010975	4820
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000236757	retained_intron		17	-1	33999684	813
ENSMUSG00000076710	IG_V_gene	Ighv1-49	ENSMUST00000192724	IG_V_gene		12	-1	115055656	351
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000107910	protein_coding	alternative2	7	-1	44553923	1948
ENSMUSG00000076710	IG_V_gene	Ighv1-49	ENSMUST00000103519	IG_V_gene	principal1	12	-1	115055516	294
ENSMUSG00000043529	protein_coding	Olfr266	ENSMUST00000059486	protein_coding	principal1	3	-1	106822582	1027
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000173075	protein_coding		17	-1	34000281	892
ENSMUSG00000048485	protein_coding	Zbtb8b	ENSMUST00000106046	protein_coding	alternative2	4	-1	129440853	3323
ENSMUSG00000045160	protein_coding	Bola3	ENSMUST00000122216	protein_coding		6	1	83349147	554
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000172782	processed_transcript		17	-1	33999474	480
ENSMUSG00000061232	protein_coding	H2-K1	ENSMUST00000236877	retained_intron		17	-1	34000208	504
ENSMUSG00000048485	protein_coding	Zbtb8b	ENSMUST00000132556	processed_transcript		4	-1	129432529	516
ENSMUSG00000045160	protein_coding	Bola3	ENSMUST00000120040	protein_coding		6	1	83349216	583
ENSMUSG00000047414	protein_coding	Flrt2	ENSMUST00000057324	protein_coding	principal1	12	1	95692226	7099
ENSMUSG00000048485	protein_coding	Zbtb8b	ENSMUST00000124364	retained_intron		4	-1	129440820	4214
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000190068	nonsense_mediated_decay		7	-1	141443353	3263
ENSMUSG00000035864	protein_coding	Syt1	ENSMUST00000064054	protein_coding	principal1	10	-1	109010982	4745
ENSMUSG00000096908	TR_V_gene	Trav7-3	ENSMUST00000177622	TR_V_gene	principal1	14	1	53443249	402
ENSMUSG00000047414	protein_coding	Flrt2	ENSMUST00000110117	protein_coding	principal1	12	1	95695357	3223
ENSMUSG00000048485	protein_coding	Zbtb8b	ENSMUST00000053042	protein_coding	principal2	4	-1	129440818	3288
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000171687	protein_coding		16	1	38562812	2667
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000136096	nonsense_mediated_decay		10	1	73821883	6846
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000002924	protein_coding	principal1	16	1	38562812	2871
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000105429	protein_coding		10	1	73821883	6719
ENSMUSG00000094468	TR_V_gene	Trav6-4	ENSMUST00000180711	TR_V_gene	principal5	14	1	53454296	378
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000125055	nonsense_mediated_decay		10	1	73821883	6852
ENSMUSG00000035864	protein_coding	Syt1	ENSMUST00000147593	retained_intron		10	-1	108636964	717
ENSMUSG00000094468	TR_V_gene	Trav6-4	ENSMUST00000184650	TR_V_gene	alternative2	14	1	53454327	338
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000163948	protein_coding		16	1	38562861	837
ENSMUSG00000045160	protein_coding	Bola3	ENSMUST00000136501	protein_coding	principal1	6	1	83349446	2312
ENSMUSG00000085662	antisense	Gm16220	ENSMUST00000131874	antisense		10	-1	75993992	405
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000166235	processed_transcript		16	1	38562886	513
ENSMUSG00000105102	lincRNA	Gm35507	ENSMUST00000197932	lincRNA		3	-1	106879361	2761
ENSMUSG00000045160	protein_coding	Bola3	ENSMUST00000133122	processed_transcript		6	1	83349491	189
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000163133	processed_transcript		16	1	38564189	228
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000128703	nonsense_mediated_decay		7	-1	141443356	3161
ENSMUSG00000082619	processed_pseudogene	Gm16219	ENSMUST00000120096	processed_pseudogene		10	1	75969898	274
ENSMUSG00000045160	protein_coding	Bola3	ENSMUST00000127769	retained_intron		6	1	83349520	315
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000167033	retained_intron		16	1	38575442	790
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000123358	retained_intron		7	-1	44553911	1853
ENSMUSG00000035864	protein_coding	Syt1	ENSMUST00000156979	processed_transcript		10	-1	109009111	1113
ENSMUSG00000045160	protein_coding	Bola3	ENSMUST00000151329	retained_intron		6	1	83351040	517
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000131980	retained_intron		7	-1	141443992	3653
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000128354	retained_intron		7	-1	44551623	547
ENSMUSG00000035864	protein_coding	Syt1	ENSMUST00000146618	retained_intron		10	-1	109010962	3488
ENSMUSG00000046994	protein_coding	Mars2	ENSMUST00000061334	protein_coding	principal1	1	1	55237177	11294
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000166854	protein_coding		16	1	38575765	482
ENSMUSG00000045160	protein_coding	Bola3	ENSMUST00000055875	retained_intron		6	1	83351040	709
ENSMUSG00000035864	protein_coding	Syt1	ENSMUST00000126278	retained_intron		10	-1	109009100	3093
ENSMUSG00000045160	protein_coding	Bola3	ENSMUST00000134765	processed_transcript		6	1	83352095	464
ENSMUSG00000112039	protein_coding	Gm5136	ENSMUST00000218023	protein_coding	principal1	10	-1	108700160	1397
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000169554	protein_coding		16	1	38582109	578
ENSMUSG00000045160	protein_coding	Bola3	ENSMUST00000148875	processed_transcript		6	1	83353313	1169
ENSMUSG00000092429	unprocessed_pseudogene	Gm18958	ENSMUST00000174258	unprocessed_pseudogene		7	1	84801034	762
ENSMUSG00000111910	TEC	Gm47472	ENSMUST00000219164	TEC		10	1	108778311	4563
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000132769	retained_intron		7	-1	44553951	1530
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000163549	retained_intron		16	1	38585416	835
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000137674	retained_intron		7	-1	44551965	629
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000171064	retained_intron		16	1	38585493	445
ENSMUSG00000097668	lincRNA	Gm26761	ENSMUST00000180650	lincRNA		5	-1	64698521	2192
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000165631	protein_coding		16	1	38585508	437
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000209017	protein_coding		7	-1	44553708	627
ENSMUSG00000021608	protein_coding	Lpcat1	ENSMUST00000022099	protein_coding	principal2	13	1	73467197	3675
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000208366	protein_coding		7	-1	44553895	704
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000170097	processed_transcript		16	1	38587211	725
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000207550	retained_intron		7	-1	44553692	675
ENSMUSG00000024789	protein_coding	Jak2	ENSMUST00000236990	protein_coding		19	1	29251839	2219
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000207737	protein_coding		7	-1	44553901	411
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000141901	retained_intron		7	-1	44552587	237
ENSMUSG00000002845	protein_coding	Tmem39a	ENSMUST00000165140	retained_intron		16	1	38588039	660
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000128600	protein_coding		7	-1	44553923	534
ENSMUSG00000091238	antisense	Gm17103	ENSMUST00000168897	antisense		16	-1	38573300	549
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000142298	protein_coding		7	-1	44553212	544
ENSMUSG00000111883	lincRNA	Gm31182	ENSMUST00000219061	lincRNA		10	1	114875007	2391
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000136611	retained_intron		7	-1	44553899	342
ENSMUSG00000112016	lincRNA	Gm31267	ENSMUST00000218941	lincRNA		10	1	114947931	1397
ENSMUSG00000060601	protein_coding	Nr1h2	ENSMUST00000167197	protein_coding	principal3	7	-1	44553923	1944
ENSMUSG00000005087	protein_coding	Cd44	ENSMUST00000005218	protein_coding	principal4	2	-1	102901625	5614
ENSMUSG00000002617	protein_coding	Zfp40	ENSMUST00000037057	protein_coding	principal1	17	-1	23193252	4103
ENSMUSG00000038463	protein_coding	Olfml2b	ENSMUST00000046792	protein_coding	principal1	1	1	170644532	3095
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000193361	protein_coding	principal3	10	1	73821883	7881
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000026580	protein_coding	principal1	7	-1	141444025	3357
ENSMUSG00000033255	protein_coding	Gm5134	ENSMUST00000099577	protein_coding	principal1	10	1	75954514	2838
ENSMUSG00000078639	protein_coding	Gm12695	ENSMUST00000107071	protein_coding	principal1	4	-1	96785186	1904
ENSMUSG00000002617	protein_coding	Zfp40	ENSMUST00000142999	processed_transcript		17	-1	23193210	511
ENSMUSG00000118333	lincRNA	4921531P14Rik	ENSMUST00000235143	lincRNA		18	-1	83306461	1354
ENSMUSG00000002617	protein_coding	Zfp40	ENSMUST00000140313	protein_coding		17	-1	23178539	2754
ENSMUSG00000055368	protein_coding	Slc6a2	ENSMUST00000165470	protein_coding	principal1	8	1	92960079	6007
ENSMUSG00000118333	lincRNA	4921531P14Rik	ENSMUST00000236997	lincRNA		18	-1	83325884	522
ENSMUSG00000002617	protein_coding	Zfp40	ENSMUST00000135840	processed_transcript		17	-1	23193251	759
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000131724	protein_coding	alternative2	10	1	73821883	6322
ENSMUSG00000117783	lincRNA	Gm31265	ENSMUST00000236106	lincRNA		18	1	83355585	937
ENSMUSG00000094766	TR_V_gene	Trav7-4	ENSMUST00000181728	TR_V_gene	principal1	14	1	53461099	451
ENSMUSG00000002617	protein_coding	Zfp40	ENSMUST00000151447	protein_coding		17	-1	23193252	635
ENSMUSG00000033255	protein_coding	Gm5134	ENSMUST00000134234	retained_intron		10	1	75974086	1198
ENSMUSG00000002617	protein_coding	Zfp40	ENSMUST00000172177	protein_coding	principal1	17	-1	23191379	2736
ENSMUSG00000105666	processed_pseudogene	Gm18711	ENSMUST00000199341	processed_pseudogene		14	1	53466079	750
ENSMUSG00000117993	lincRNA	Gm31503	ENSMUST00000236713	lincRNA		18	-1	83371350	2872
ENSMUSG00000083204	processed_pseudogene	Gm13788	ENSMUST00000120767	processed_pseudogene		2	-1	94591421	601
ENSMUSG00000055368	protein_coding	Slc6a2	ENSMUST00000072939	protein_coding	principal1	8	1	92960933	6187
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000147268	retained_intron		7	-1	141444008	3318
ENSMUSG00000106205	TEC	C230096K16Rik	ENSMUST00000198074	TEC		5	1	64804014	1722
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000138065	retained_intron		7	-1	141443356	3699
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000152655	protein_coding		10	1	73821883	3860
ENSMUSG00000005087	protein_coding	Cd44	ENSMUST00000060516	protein_coding	alternative2	2	-1	102901495	3495
ENSMUSG00000097682	lincRNA	4930554H23Rik	ENSMUST00000181327	lincRNA		7	-1	63444529	2542
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000144302	nonsense_mediated_decay		10	1	73821883	3315
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000151116	protein_coding	alternative2	10	1	73821883	6287
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000155701	protein_coding		10	1	73821883	2754
ENSMUSG00000024817	protein_coding	Uhrf2	ENSMUST00000025739	protein_coding	principal1	19	1	30030513	3536
ENSMUSG00000006764	protein_coding	Tph2	ENSMUST00000006949	protein_coding	principal1	10	-1	115185022	2626
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000152819	protein_coding		10	1	73821883	2867
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000125517	protein_coding		10	1	73821883	3074
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000190882	nonsense_mediated_decay		7	-1	141443320	2894
ENSMUSG00000019564	protein_coding	Arid3a	ENSMUST00000019708	protein_coding	principal3	10	1	79927043	5361
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000124046	protein_coding		10	1	73821883	5336
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000154949	retained_intron		7	-1	141443320	2927
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000131621	retained_intron		7	-1	141440124	524
ENSMUSG00000030147	protein_coding	Clec4b1	ENSMUST00000077228	protein_coding	principal3	6	1	123049962	674
ENSMUSG00000027939	protein_coding	Nup210l	ENSMUST00000200410	protein_coding	alternative2	3	1	90104134	5710
ENSMUSG00000006764	protein_coding	Tph2	ENSMUST00000155794	processed_transcript		10	-1	115175558	293
ENSMUSG00000098108	antisense	Gm27008	ENSMUST00000182400	antisense		3	-1	107091802	1360
ENSMUSG00000028337	protein_coding	Coro2a	ENSMUST00000107757	protein_coding	alternative2	4	-1	46566458	4124
ENSMUSG00000024817	protein_coding	Uhrf2	ENSMUST00000112552	retained_intron		19	1	30030589	1464
ENSMUSG00000019564	protein_coding	Arid3a	ENSMUST00000105377	protein_coding	alternative2	10	1	79927139	4952
ENSMUSG00000021608	protein_coding	Lpcat1	ENSMUST00000123766	nonsense_mediated_decay		13	1	73467197	3532
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000190303	retained_intron		7	-1	141442289	758
ENSMUSG00000024817	protein_coding	Uhrf2	ENSMUST00000129420	retained_intron		19	1	30073783	659
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000146682	protein_coding		10	1	73821883	1891
ENSMUSG00000024817	protein_coding	Uhrf2	ENSMUST00000150532	retained_intron		19	1	30078504	551
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000177107	protein_coding	alternative2	10	1	73821883	5696
ENSMUSG00000030605	protein_coding	Mfge8	ENSMUST00000107409	protein_coding	alternative2	7	-1	79149053	2008
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000130878	processed_transcript		7	-1	141443994	692
ENSMUSG00000098108	antisense	Gm27008	ENSMUST00000182414	antisense		3	-1	107093894	604
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000149977	protein_coding	alternative2	10	1	73821883	5843
ENSMUSG00000019564	protein_coding	Arid3a	ENSMUST00000105376	protein_coding	principal3	10	1	79927341	4892
ENSMUSG00000024817	protein_coding	Uhrf2	ENSMUST00000127244	retained_intron		19	1	30085694	856
ENSMUSG00000028337	protein_coding	Coro2a	ENSMUST00000107756	protein_coding	principal3	4	-1	46602202	4154
ENSMUSG00000025507	protein_coding	Pidd1	ENSMUST00000106005	protein_coding	principal1	7	-1	141443355	2900
ENSMUSG00000021608	protein_coding	Lpcat1	ENSMUST00000147566	nonsense_mediated_decay		13	1	73467231	1973
ENSMUSG00000024817	protein_coding	Uhrf2	ENSMUST00000123773	retained_intron		19	1	30089056	1392
ENSMUSG00000027939	protein_coding	Nup210l	ENSMUST00000029548	protein_coding	principal2	3	1	90104132	5681
ENSMUSG00000019564	protein_coding	Arid3a	ENSMUST00000131118	protein_coding		10	1	79930424	691
ENSMUSG00000115283	processed_pseudogene	Gm49252	ENSMUST00000227978	processed_pseudogene		14	-1	31459225	398
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000191854	protein_coding	alternative2	10	1	73821883	9104
ENSMUSG00000024817	protein_coding	Uhrf2	ENSMUST00000143769	retained_intron		19	1	30091961	401
ENSMUSG00000104649	unprocessed_pseudogene	Gm43712	ENSMUST00000198020	unprocessed_pseudogene		3	1	90126767	291
ENSMUSG00000018581	protein_coding	Dnah11	ENSMUST00000176756	nonsense_mediated_decay		12	-1	118060303	8260
ENSMUSG00000021608	protein_coding	Lpcat1	ENSMUST00000133791	retained_intron		13	1	73467423	789
ENSMUSG00000030147	protein_coding	Clec4b1	ENSMUST00000078559	protein_coding	alternative2	6	1	123049998	748
ENSMUSG00000114881	processed_pseudogene	Gm8588	ENSMUST00000225756	processed_pseudogene		13	1	48312670	1582
ENSMUSG00000050179	lincRNA	A930002I21Rik	ENSMUST00000060946	lincRNA		3	1	107090880	1512
ENSMUSG00000021608	protein_coding	Lpcat1	ENSMUST00000223060	protein_coding	alternative2	13	1	73471751	2141
ENSMUSG00000050179	lincRNA	A930002I21Rik	ENSMUST00000182132	lincRNA		3	1	107090882	203
ENSMUSG00000114695	lincRNA	Gm48648	ENSMUST00000225569	lincRNA		13	-1	48408512	495
ENSMUSG00000028337	protein_coding	Coro2a	ENSMUST00000135062	processed_transcript		4	-1	46542666	449
ENSMUSG00000021608	protein_coding	Lpcat1	ENSMUST00000140431	retained_intron		13	1	73502861	719
ENSMUSG00000005087	protein_coding	Cd44	ENSMUST00000099673	protein_coding	alternative2	2	-1	102901510	2848
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000134009	protein_coding		10	1	73821943	3300
ENSMUSG00000092217	unprocessed_pseudogene	Vmn2r-ps62	ENSMUST00000174119	unprocessed_pseudogene		7	-1	84811431	578
ENSMUSG00000082368	processed_pseudogene	Gm11225	ENSMUST00000118903	processed_pseudogene		4	1	70047157	1049
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000177420	protein_coding		10	1	73821943	4878
ENSMUSG00000028337	protein_coding	Coro2a	ENSMUST00000129121	retained_intron		4	-1	46542802	1236
ENSMUSG00000021608	protein_coding	Lpcat1	ENSMUST00000124627	retained_intron		13	1	73510949	360
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000125006	protein_coding		10	1	73821943	4863
ENSMUSG00000019564	protein_coding	Arid3a	ENSMUST00000135005	processed_transcript		10	1	79946279	1839
ENSMUSG00000068629	processed_pseudogene	Gm6155	ENSMUST00000173735	processed_pseudogene		7	-1	84834879	341
ENSMUSG00000021608	protein_coding	Lpcat1	ENSMUST00000222881	retained_intron		13	1	73513403	691
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000191709	protein_coding	alternative2	10	1	73947056	5346
ENSMUSG00000108325	TEC	Gm44898	ENSMUST00000205934	TEC		7	1	55275936	2223
ENSMUSG00000030605	protein_coding	Mfge8	ENSMUST00000032825	protein_coding	principal3	7	-1	79149060	2125
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000193739	protein_coding	alternative2	10	1	73947056	5034
ENSMUSG00000028337	protein_coding	Coro2a	ENSMUST00000139179	retained_intron		4	-1	46601891	1389
ENSMUSG00000082249	processed_pseudogene	Gm12997	ENSMUST00000120207	processed_pseudogene		4	-1	117015766	640
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000195531	protein_coding	alternative2	10	1	73947056	5241
ENSMUSG00000108522	TEC	Gm44664	ENSMUST00000206841	TEC		7	1	122362000	1786
ENSMUSG00000056145	lincRNA	AI504432	ENSMUST00000070085	lincRNA		3	1	107039504	5569
ENSMUSG00000108341	TEC	Gm44746	ENSMUST00000205565	TEC		7	1	122590935	1349
ENSMUSG00000028337	protein_coding	Coro2a	ENSMUST00000127304	processed_transcript		4	-1	46601894	642
ENSMUSG00000108752	TEC	Gm45191	ENSMUST00000205846	TEC		7	1	122313064	5439
ENSMUSG00000030605	protein_coding	Mfge8	ENSMUST00000205563	nonsense_mediated_decay		7	-1	79149031	872
ENSMUSG00000070460	protein_coding	Olfr291	ENSMUST00000217039	protein_coding	alternative2	7	1	84853553	3471
ENSMUSG00000047959	protein_coding	Kcna3	ENSMUST00000052718	protein_coding	principal1	3	1	107036169	1902
ENSMUSG00000030605	protein_coding	Mfge8	ENSMUST00000205649	retained_intron		7	-1	79137026	928
ENSMUSG00000024789	protein_coding	Jak2	ENSMUST00000238009	protein_coding	principal1	19	1	29252441	3995
ENSMUSG00000028337	protein_coding	Coro2a	ENSMUST00000030021	protein_coding	principal3	4	-1	46566440	4112
ENSMUSG00000023030	protein_coding	Slc11a2	ENSMUST00000023774	protein_coding	principal3	15	-1	100423055	3025
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000147455	processed_transcript		10	1	74303151	2841
ENSMUSG00000030605	protein_coding	Mfge8	ENSMUST00000205494	retained_intron		7	-1	79142807	859
ENSMUSG00000070460	protein_coding	Olfr291	ENSMUST00000211582	protein_coding	principal2	7	1	84853571	1159
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000194315	protein_coding		10	1	74355859	4715
ENSMUSG00000076831	TR_V_gene	Trav8-1	ENSMUST00000103643	TR_V_gene	principal1	14	1	53469756	328
ENSMUSG00000030605	protein_coding	Mfge8	ENSMUST00000205929	retained_intron		7	-1	79143050	859
ENSMUSG00000092425	unprocessed_pseudogene	Gm8018	ENSMUST00000173536	unprocessed_pseudogene		7	1	84879555	789
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000139106	retained_intron		10	1	74385873	462
ENSMUSG00000024789	protein_coding	Jak2	ENSMUST00000025705	protein_coding	principal1	19	1	29251828	4947
ENSMUSG00000082484	processed_pseudogene	Gm16177	ENSMUST00000120728	processed_pseudogene		8	-1	86660035	718
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000128843	retained_intron		10	1	74584216	691
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000127928	processed_transcript		10	1	74630912	3404
ENSMUSG00000024789	protein_coding	Jak2	ENSMUST00000065796	protein_coding	principal1	19	1	29251828	5030
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000194729	retained_intron		10	1	74631409	5272
ENSMUSG00000070459	protein_coding	Olfr290	ENSMUST00000216367	protein_coding	principal1	7	1	84913075	5182
ENSMUSG00000078958	protein_coding	Atp6ap1l	ENSMUST00000183162	protein_coding		13	-1	90899813	775
ENSMUSG00000030516	protein_coding	Tjp1	ENSMUST00000102592	protein_coding	principal3	7	-1	65371239	7049
ENSMUSG00000030605	protein_coding	Mfge8	ENSMUST00000205688	processed_transcript		7	-1	79147560	731
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000192370	processed_transcript		10	1	74631834	556
ENSMUSG00000070459	protein_coding	Olfr290	ENSMUST00000216184	nonsense_mediated_decay		7	1	84913075	4757
ENSMUSG00000070459	protein_coding	Olfr290	ENSMUST00000214501	protein_coding	principal1	7	1	84913089	5196
ENSMUSG00000001729	protein_coding	Akt1	ENSMUST00000001780	protein_coding	principal1	12	-1	112674276	2690
ENSMUSG00000030605	protein_coding	Mfge8	ENSMUST00000205526	retained_intron		7	-1	79148989	677
ENSMUSG00000092214	processed_pseudogene	Gm18560	ENSMUST00000173463	processed_pseudogene		7	-1	84920501	1123
ENSMUSG00000001729	protein_coding	Akt1	ENSMUST00000128300	protein_coding		12	-1	112671564	1342
ENSMUSG00000030605	protein_coding	Mfge8	ENSMUST00000206844	processed_transcript		7	-1	79148231	405
ENSMUSG00000078958	protein_coding	Atp6ap1l	ENSMUST00000182446	nonsense_mediated_decay		13	-1	90905307	1097
ENSMUSG00000104705	TEC	4930405N21Rik	ENSMUST00000199950	TEC		5	-1	113321653	1200
ENSMUSG00000001729	protein_coding	Akt1	ENSMUST00000159815	retained_intron		12	-1	112656973	944
ENSMUSG00000105174	TEC	Gm43353	ENSMUST00000199224	TEC		5	1	113324186	1295
ENSMUSG00000023030	protein_coding	Slc11a2	ENSMUST00000138843	protein_coding	alternative2	15	-1	100423002	4415
ENSMUSG00000031622	protein_coding	Sin3b	ENSMUST00000109950	protein_coding		8	1	72723285	1024
ENSMUSG00000030516	protein_coding	Tjp1	ENSMUST00000032729	protein_coding	alternative2	7	-1	65371015	6102
ENSMUSG00000053873	protein_coding	Aym1	ENSMUST00000066573	protein_coding	principal1	5	1	113357294	528
ENSMUSG00000023030	protein_coding	Slc11a2	ENSMUST00000124324	protein_coding		15	-1	100403243	718
ENSMUSG00000001729	protein_coding	Akt1	ENSMUST00000123563	retained_intron		12	-1	112659637	803
ENSMUSG00000029178	protein_coding	Klf3	ENSMUST00000165536	protein_coding	principal1	5	1	64803388	5221
ENSMUSG00000050201	protein_coding	Otop2	ENSMUST00000055490	protein_coding	principal1	11	1	115307163	2335
ENSMUSG00000001729	protein_coding	Akt1	ENSMUST00000127588	retained_intron		12	-1	112659142	386
ENSMUSG00000023030	protein_coding	Slc11a2	ENSMUST00000140535	retained_intron		15	-1	100403422	709
ENSMUSG00000001729	protein_coding	Akt1	ENSMUST00000144550	protein_coding		12	-1	112674884	862
ENSMUSG00000023030	protein_coding	Slc11a2	ENSMUST00000123461	protein_coding		15	-1	100425072	709
ENSMUSG00000035963	protein_coding	Odf3l2	ENSMUST00000095464	protein_coding	principal1	10	-1	79645738	1248
ENSMUSG00000001729	protein_coding	Akt1	ENSMUST00000130342	protein_coding		12	-1	112673944	736
ENSMUSG00000050201	protein_coding	Otop2	ENSMUST00000106544	protein_coding	principal1	11	1	115322925	2220
ENSMUSG00000025170	protein_coding	Rab40b	ENSMUST00000106107	protein_coding	principal1	11	-1	121388251	1861
ENSMUSG00000030516	protein_coding	Tjp1	ENSMUST00000206612	nonsense_mediated_decay		7	-1	65371015	5938
ENSMUSG00000078958	protein_coding	Atp6ap1l	ENSMUST00000109541	protein_coding	principal1	13	-1	90905355	1186
ENSMUSG00000023030	protein_coding	Slc11a2	ENSMUST00000136168	nonsense_mediated_decay		15	-1	100422969	393
ENSMUSG00000050201	protein_coding	Otop2	ENSMUST00000139466	processed_transcript		11	1	115322530	395
ENSMUSG00000113051	processed_pseudogene	Gm47672	ENSMUST00000222354	processed_pseudogene		12	1	105135196	246
ENSMUSG00000001729	protein_coding	Akt1	ENSMUST00000139388	processed_transcript		12	-1	112668114	397
ENSMUSG00000030516	protein_coding	Tjp1	ENSMUST00000132036	processed_transcript		7	-1	65302305	699
ENSMUSG00000023030	protein_coding	Slc11a2	ENSMUST00000154331	protein_coding		15	-1	100424214	389
ENSMUSG00000050201	protein_coding	Otop2	ENSMUST00000131050	processed_transcript		11	1	115322761	285
ENSMUSG00000078958	protein_coding	Atp6ap1l	ENSMUST00000182104	protein_coding		13	-1	90898824	585
ENSMUSG00000030516	protein_coding	Tjp1	ENSMUST00000144961	retained_intron		7	-1	65342797	385
ENSMUSG00000001729	protein_coding	Akt1	ENSMUST00000127902	processed_transcript		12	-1	112674206	526
ENSMUSG00000100215	processed_pseudogene	Gm8292	ENSMUST00000162574	processed_pseudogene		1	1	55335401	396
ENSMUSG00000023030	protein_coding	Slc11a2	ENSMUST00000154676	protein_coding		15	-1	100424092	387
ENSMUSG00000029178	protein_coding	Klf3	ENSMUST00000200587	retained_intron		5	1	64803577	1026
ENSMUSG00000030516	protein_coding	Tjp1	ENSMUST00000206228	protein_coding		7	-1	65527696	551
ENSMUSG00000025170	protein_coding	Rab40b	ENSMUST00000149948	processed_transcript		11	-1	121388065	413
ENSMUSG00000028362	protein_coding	Tnfsf8	ENSMUST00000030047	protein_coding	principal1	4	-1	63861347	3807
ENSMUSG00000078958	protein_coding	Atp6ap1l	ENSMUST00000182932	processed_transcript		13	-1	90905335	432
ENSMUSG00000025977	protein_coding	Boll	ENSMUST00000161810	nonsense_mediated_decay		1	-1	55300178	535
ENSMUSG00000030516	protein_coding	Tjp1	ENSMUST00000206438	retained_intron		7	-1	65527781	451
ENSMUSG00000029178	protein_coding	Klf3	ENSMUST00000200677	processed_transcript		5	1	64803622	648
ENSMUSG00000108533	TEC	Gm44792	ENSMUST00000207008	TEC		7	-1	65481221	1628
ENSMUSG00000025170	protein_coding	Rab40b	ENSMUST00000124639	processed_transcript		11	-1	121388221	398
ENSMUSG00000025170	protein_coding	Rab40b	ENSMUST00000135290	processed_transcript		11	-1	121388230	349
ENSMUSG00000044362	protein_coding	Ccdc89	ENSMUST00000061391	protein_coding	principal1	7	1	90426577	2093
ENSMUSG00000093552	processed_pseudogene	Gm5777	ENSMUST00000177265	processed_pseudogene		10	1	57782354	448
ENSMUSG00000028334	protein_coding	Nans	ENSMUST00000030018	protein_coding	principal1	4	1	46489248	2179
ENSMUSG00000096900	TR_V_gene	Trav9-1	ENSMUST00000103581	TR_V_gene	principal1	14	1	53488045	398
ENSMUSG00000029178	protein_coding	Klf3	ENSMUST00000197869	retained_intron		5	1	64812340	2749
ENSMUSG00000106396	antisense	Gm42902	ENSMUST00000199508	antisense		5	-1	107403480	662
ENSMUSG00000084345	processed_pseudogene	Rpl17-ps4	ENSMUST00000120241	processed_pseudogene		4	-1	63896099	555
ENSMUSG00000029178	protein_coding	Klf3	ENSMUST00000197879	protein_coding		5	1	64812384	590
ENSMUSG00000045288	protein_coding	Ush1g	ENSMUST00000103037	protein_coding	principal1	11	-1	115322041	3306
ENSMUSG00000028334	protein_coding	Nans	ENSMUST00000132345	processed_transcript		4	1	46489319	2603
ENSMUSG00000096149	TR_V_gene	Trav6-5	ENSMUST00000181210	TR_V_gene	principal5	14	1	53491115	375
ENSMUSG00000029178	protein_coding	Klf3	ENSMUST00000196764	retained_intron		5	1	64815850	4016
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000061052	protein_coding		17	-1	35910075	1452
ENSMUSG00000031622	protein_coding	Sin3b	ENSMUST00000004494	protein_coding	principal1	8	1	72723288	4115
ENSMUSG00000096149	TR_V_gene	Trav6-5	ENSMUST00000183488	TR_V_gene	alternative2	14	1	53491152	335
ENSMUSG00000029178	protein_coding	Klf3	ENSMUST00000200384	nonsense_mediated_decay		5	1	64822348	298
ENSMUSG00000005087	protein_coding	Cd44	ENSMUST00000111190	protein_coding	alternative2	2	-1	102901350	1412
ENSMUSG00000052613	protein_coding	Pcdh15	ENSMUST00000064562	protein_coding		10	1	73821867	8830
ENSMUSG00000028334	protein_coding	Nans	ENSMUST00000150584	processed_transcript		4	1	46489374	444
ENSMUSG00000083155	processed_pseudogene	Gm11866	ENSMUST00000120209	processed_pseudogene		11	-1	121415426	335
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000077494	protein_coding		17	-1	35910046	1340
ENSMUSG00000029178	protein_coding	Klf3	ENSMUST00000198946	protein_coding		5	1	64826809	809
ENSMUSG00000031622	protein_coding	Sin3b	ENSMUST00000212095	protein_coding		8	1	72723290	1257
ENSMUSG00000028334	protein_coding	Nans	ENSMUST00000137874	processed_transcript		4	1	46489985	620
ENSMUSG00000092625	antisense	Gm20404	ENSMUST00000174032	antisense		6	1	116107650	621
ENSMUSG00000031622	protein_coding	Sin3b	ENSMUST00000212096	protein_coding		8	1	72723415	664
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000149277	protein_coding		17	-1	35910057	1388
ENSMUSG00000101878	processed_pseudogene	Gm8203	ENSMUST00000173192	processed_pseudogene		6	1	116173737	387
ENSMUSG00000033794	protein_coding	Lpcat2b	ENSMUST00000166599	protein_coding	principal1	5	1	107431549	2782
ENSMUSG00000031622	protein_coding	Sin3b	ENSMUST00000213079	processed_transcript		8	1	72740851	819
ENSMUSG00000112838	processed_pseudogene	Gm47098	ENSMUST00000220399	processed_pseudogene		10	1	73275737	350
ENSMUSG00000029178	protein_coding	Klf3	ENSMUST00000166409	protein_coding	principal1	5	1	64812339	1562
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000143114	retained_intron		17	-1	35898582	539
ENSMUSG00000096551	TR_V_gene	Trav10	ENSMUST00000103583	TR_V_gene	principal1	14	1	53505727	406
ENSMUSG00000091825	processed_pseudogene	Gm5778	ENSMUST00000171003	processed_pseudogene		10	1	73201695	1072
ENSMUSG00000031622	protein_coding	Sin3b	ENSMUST00000212435	retained_intron		8	1	72741762	633
ENSMUSG00000102584	TEC	Gm37438	ENSMUST00000192813	TEC		10	-1	73183318	393
ENSMUSG00000032875	protein_coding	Arhgef17	ENSMUST00000107032	protein_coding	principal2	7	-1	100932107	10190
ENSMUSG00000031622	protein_coding	Sin3b	ENSMUST00000212256	processed_transcript		8	1	72753325	1888
ENSMUSG00000031622	protein_coding	Sin3b	ENSMUST00000212677	processed_transcript		8	1	72756685	493
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000126744	nonsense_mediated_decay		17	-1	35908961	882
ENSMUSG00000005087	protein_coding	Cd44	ENSMUST00000111191	protein_coding	alternative2	2	-1	102901369	1533
ENSMUSG00000067063	processed_pseudogene	Gm6990	ENSMUST00000086830	processed_pseudogene		19	-1	56755346	348
ENSMUSG00000114643	processed_pseudogene	Gm18064	ENSMUST00000224678	processed_pseudogene		13	-1	61149807	1574
ENSMUSG00000032875	protein_coding	Arhgef17	ENSMUST00000209041	protein_coding	alternative2	7	-1	100894690	4516
ENSMUSG00000097640	processed_transcript	Gm20033	ENSMUST00000180912	antisense		5	-1	64804117	796
ENSMUSG00000097640	processed_transcript	Gm20033	ENSMUST00000192228	retained_intron		5	-1	64708948	738
ENSMUSG00000032875	protein_coding	Arhgef17	ENSMUST00000208482	protein_coding		7	-1	100879708	832
ENSMUSG00000097640	processed_transcript	Gm20033	ENSMUST00000181929	retained_intron		5	-1	64714449	464
ENSMUSG00000097640	processed_transcript	Gm20033	ENSMUST00000180799	processed_transcript		5	-1	64721757	383
ENSMUSG00000032875	protein_coding	Arhgef17	ENSMUST00000208735	retained_intron		7	-1	100883535	794
ENSMUSG00000097640	processed_transcript	Gm20033	ENSMUST00000200143	retained_intron		5	-1	64803836	1460
ENSMUSG00000097640	processed_transcript	Gm20033	ENSMUST00000180470	antisense		5	-1	64804116	572
ENSMUSG00000005087	protein_coding	Cd44	ENSMUST00000111198	protein_coding	alternative2	2	-1	102901350	1981
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000141662	protein_coding	alternative1	17	-1	35910045	2034
ENSMUSG00000095932	protein_coding	Vmn1r49	ENSMUST00000203791	protein_coding	principal1	6	-1	90078506	1356
ENSMUSG00000022369	protein_coding	Mtbp	ENSMUST00000022998	protein_coding	principal1	15	1	55557408	3144
ENSMUSG00000095932	protein_coding	Vmn1r49	ENSMUST00000226368	protein_coding	principal1	6	-1	90078506	6276
ENSMUSG00000005087	protein_coding	Cd44	ENSMUST00000111192	protein_coding	alternative2	2	-1	102901346	1305
ENSMUSG00000059027	processed_transcript	9630013D21Rik	ENSMUST00000156790	processed_transcript		4	-1	109657827	3096
ENSMUSG00000095932	protein_coding	Vmn1r49	ENSMUST00000071865	protein_coding	principal1	6	-1	90073018	933
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000056034	protein_coding	principal3	17	-1	35910045	1930
ENSMUSG00000005087	protein_coding	Cd44	ENSMUST00000124624	retained_intron		2	-1	102901458	1907
ENSMUSG00000022369	protein_coding	Mtbp	ENSMUST00000170046	protein_coding		15	1	55557595	3197
ENSMUSG00000031533	protein_coding	Mrps31	ENSMUST00000033934	protein_coding	principal1	8	1	22411361	1515
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000140292	protein_coding		17	-1	35904327	731
ENSMUSG00000059027	processed_transcript	9630013D21Rik	ENSMUST00000131216	processed_transcript		4	-1	109657853	1875
ENSMUSG00000022369	protein_coding	Mtbp	ENSMUST00000169517	nonsense_mediated_decay		15	1	55557735	590
ENSMUSG00000059027	processed_transcript	9630013D21Rik	ENSMUST00000127391	processed_transcript		4	-1	109654131	492
ENSMUSG00000022369	protein_coding	Mtbp	ENSMUST00000169667	protein_coding		15	1	55576780	2570
ENSMUSG00000033805	protein_coding	Ephx4	ENSMUST00000159968	protein_coding		5	1	107402736	468
ENSMUSG00000059027	processed_transcript	9630013D21Rik	ENSMUST00000126635	processed_transcript		4	-1	109657608	431
ENSMUSG00000005087	protein_coding	Cd44	ENSMUST00000111194	protein_coding	alternative2	2	-1	102901665	5045
ENSMUSG00000031533	protein_coding	Mrps31	ENSMUST00000211083	retained_intron		8	1	22411398	2625
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000072671	protein_coding	alternative1	17	-1	91088907	8118
ENSMUSG00000022369	protein_coding	Mtbp	ENSMUST00000171146	retained_intron		15	1	55617587	463
ENSMUSG00000087641	processed_transcript	Gm12811	ENSMUST00000125237	processed_transcript		4	1	109569214	667
ENSMUSG00000082771	processed_pseudogene	Gm12803	ENSMUST00000118907	processed_pseudogene		4	1	109629582	821
ENSMUSG00000022369	protein_coding	Mtbp	ENSMUST00000166449	processed_transcript		15	1	55621452	649
ENSMUSG00000035597	protein_coding	Prpf39	ENSMUST00000120580	protein_coding	principal1	12	1	65036333	4069
ENSMUSG00000084370	processed_pseudogene	Gm15442	ENSMUST00000117905	processed_pseudogene		3	-1	78488637	1527
ENSMUSG00000102341	processed_pseudogene	Gm18952	ENSMUST00000194471	processed_pseudogene		3	1	78758619	846
ENSMUSG00000018581	protein_coding	Dnah11	ENSMUST00000084806	protein_coding	principal1	12	-1	118199043	14072
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000154647	protein_coding	principal1	2	1	30266203	1678
ENSMUSG00000018581	protein_coding	Dnah11	ENSMUST00000175662	retained_intron		12	-1	117915738	716
ENSMUSG00000018581	protein_coding	Dnah11	ENSMUST00000176239	processed_transcript		12	-1	117915964	680
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000113645	protein_coding	principal1	2	1	30266721	1325
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000133877	protein_coding		2	1	30266735	783
ENSMUSG00000033805	protein_coding	Ephx4	ENSMUST00000049146	protein_coding	principal1	5	1	107403496	1279
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000139719	protein_coding		2	1	30266819	751
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000113643	protein_coding		2	1	30266849	1195
ENSMUSG00000033805	protein_coding	Ephx4	ENSMUST00000161246	protein_coding		5	1	107403775	453
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000085290	processed_transcript		2	1	30266851	460
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000150695	protein_coding		2	1	30266856	720
ENSMUSG00000033805	protein_coding	Ephx4	ENSMUST00000161452	protein_coding		5	1	107405785	424
ENSMUSG00000006390	protein_coding	Elovl1	ENSMUST00000006557	protein_coding	principal1	4	1	118428093	1811
ENSMUSG00000090558	antisense	Gm17202	ENSMUST00000171723	antisense		5	-1	107431910	951
ENSMUSG00000022967	protein_coding	Ifnar1	ENSMUST00000023689	protein_coding	principal1	16	1	91485238	3909
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000127689	nonsense_mediated_decay		2	1	30266863	1183
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000138254	nonsense_mediated_decay		2	1	30266863	1390
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000151009	retained_intron		17	-1	35909435	762
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000147204	nonsense_mediated_decay		2	1	30277003	746
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000129512	retained_intron		2	1	30279631	782
ENSMUSG00000022967	protein_coding	Ifnar1	ENSMUST00000123196	nonsense_mediated_decay		16	1	91485249	3433
ENSMUSG00000094497	processed_pseudogene	Gm8210	ENSMUST00000178557	processed_pseudogene		1	1	43189156	483
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000154988	retained_intron		2	1	30279678	746
ENSMUSG00000006390	protein_coding	Elovl1	ENSMUST00000102673	protein_coding		4	1	118428125	1248
ENSMUSG00000022967	protein_coding	Ifnar1	ENSMUST00000117748	protein_coding	principal1	16	1	91485264	2771
ENSMUSG00000006390	protein_coding	Elovl1	ENSMUST00000135162	processed_transcript		4	1	118428130	473
ENSMUSG00000022967	protein_coding	Ifnar1	ENSMUST00000145008	retained_intron		16	1	91485277	2234
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000088896	protein_coding	principal2	6	-1	116193486	5838
ENSMUSG00000029022	protein_coding	Miip	ENSMUST00000030886	protein_coding	principal2	4	-1	147868719	1813
ENSMUSG00000006390	protein_coding	Elovl1	ENSMUST00000129419	processed_transcript		4	1	118428174	617
ENSMUSG00000006390	protein_coding	Elovl1	ENSMUST00000143140	processed_transcript		4	1	118428208	587
ENSMUSG00000022967	protein_coding	Ifnar1	ENSMUST00000232509	nonsense_mediated_decay		16	1	91485316	552
ENSMUSG00000062826	protein_coding	Ces2f	ENSMUST00000076384	protein_coding	principal1	8	1	104947356	1823
ENSMUSG00000029022	protein_coding	Miip	ENSMUST00000172710	protein_coding	principal2	4	-1	147868816	1769
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000204353	protein_coding	alternative2	6	-1	116107859	2851
ENSMUSG00000022967	protein_coding	Ifnar1	ENSMUST00000129878	protein_coding		16	1	91485336	415
ENSMUSG00000079484	protein_coding	Phyhd1	ENSMUST00000091132	protein_coding		2	1	30266529	1353
ENSMUSG00000018846	protein_coding	Pank3	ENSMUST00000018990	protein_coding	principal1	11	1	35769484	7376
ENSMUSG00000027074	protein_coding	Slc43a3	ENSMUST00000090726	protein_coding	principal1	2	1	84936664	2583
ENSMUSG00000062826	protein_coding	Ces2f	ENSMUST00000212926	protein_coding		8	1	104947356	1430
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000032222	protein_coding		6	-1	116134320	2815
ENSMUSG00000022967	protein_coding	Ifnar1	ENSMUST00000231604	processed_transcript		16	1	91492649	543
ENSMUSG00000006390	protein_coding	Elovl1	ENSMUST00000067896	protein_coding	principal1	4	1	118429701	1137
ENSMUSG00000005501	protein_coding	Usp40	ENSMUST00000189409	nonsense_mediated_decay		1	-1	87975898	4633
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000137069	processed_transcript		17	-1	35909573	695
ENSMUSG00000022967	protein_coding	Ifnar1	ENSMUST00000232453	nonsense_mediated_decay		16	1	91505304	468
ENSMUSG00000062826	protein_coding	Ces2f	ENSMUST00000212820	nonsense_mediated_decay		8	1	104947356	4925
ENSMUSG00000032017	protein_coding	Grik4	ENSMUST00000114865	protein_coding	principal1	9	-1	42944493	5887
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000130309	retained_intron		17	-1	35909039	537
ENSMUSG00000042272	protein_coding	Sestd1	ENSMUST00000102660	protein_coding	principal1	2	-1	77265768	8990
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000141132	protein_coding		17	-1	35909626	697
ENSMUSG00000027074	protein_coding	Slc43a3	ENSMUST00000155537	retained_intron		2	1	84936890	2621
ENSMUSG00000006390	protein_coding	Elovl1	ENSMUST00000167636	protein_coding	principal1	4	1	118428119	1340
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000172510	protein_coding		6	-1	116057011	2612
ENSMUSG00000027074	protein_coding	Slc43a3	ENSMUST00000130278	protein_coding		2	1	84936579	378
ENSMUSG00000029022	protein_coding	Miip	ENSMUST00000173034	retained_intron		4	-1	147862782	804
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000155094	protein_coding		1	1	85649988	1666
ENSMUSG00000032017	protein_coding	Grik4	ENSMUST00000034515	protein_coding	principal1	9	-1	42808699	3413
ENSMUSG00000042272	protein_coding	Sestd1	ENSMUST00000102659	protein_coding	principal1	2	-1	77280592	2720
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000173110	nonsense_mediated_decay		6	-1	116134430	2642
ENSMUSG00000025977	protein_coding	Boll	ENSMUST00000173983	protein_coding		1	-1	55360741	2635
ENSMUSG00000033688	protein_coding	1300017J02Rik	ENSMUST00000035163	protein_coding	principal1	9	-1	103288297	2284
ENSMUSG00000027074	protein_coding	Slc43a3	ENSMUST00000138719	protein_coding		2	1	84936617	444
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000173140	protein_coding		6	-1	116056955	1910
ENSMUSG00000019893	protein_coding	Ros1	ENSMUST00000219173	nonsense_mediated_decay		10	-1	52194956	7425
ENSMUSG00000095862	TR_V_gene	Trav6-6	ENSMUST00000103584	TR_V_gene	principal1	14	1	53516929	344
ENSMUSG00000042272	protein_coding	Sestd1	ENSMUST00000145366	processed_transcript		2	-1	77199427	775
ENSMUSG00000111198	lincRNA	Gm34263	ENSMUST00000214010	lincRNA		9	1	14643772	352
ENSMUSG00000007476	protein_coding	Lrrc8a	ENSMUST00000113654	protein_coding	principal1	2	1	30237715	4194
ENSMUSG00000033688	protein_coding	1300017J02Rik	ENSMUST00000151073	retained_intron		9	-1	103257026	970
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000145440	nonsense_mediated_decay		1	1	85650008	3807
ENSMUSG00000027074	protein_coding	Slc43a3	ENSMUST00000141650	protein_coding		2	1	84936646	835
ENSMUSG00000029022	protein_coding	Miip	ENSMUST00000119975	protein_coding	alternative2	4	-1	147868483	1879
ENSMUSG00000033688	protein_coding	1300017J02Rik	ENSMUST00000123530	protein_coding		9	-1	103288224	1874
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000173548	protein_coding	alternative2	6	-1	116073156	1622
ENSMUSG00000111198	lincRNA	Gm34263	ENSMUST00000214353	lincRNA		9	1	14644541	303
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000140990	retained_intron		17	-1	35909739	1428
ENSMUSG00000033688	protein_coding	1300017J02Rik	ENSMUST00000154357	protein_coding		9	-1	103266225	724
ENSMUSG00000027074	protein_coding	Slc43a3	ENSMUST00000155506	processed_transcript		2	1	84936689	330
ENSMUSG00000027374	protein_coding	Mrps5	ENSMUST00000028852	protein_coding	principal1	2	1	127587222	4481
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000172909	nonsense_mediated_decay		6	-1	116133903	380
ENSMUSG00000096615	TR_V_gene	Trav11	ENSMUST00000103585	TR_V_gene	principal1	14	1	53519303	343
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000127959	processed_transcript		17	-1	35910045	838
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000205160	retained_intron		6	-1	116058049	4567
ENSMUSG00000042272	protein_coding	Sestd1	ENSMUST00000139021	processed_transcript		2	-1	77280589	1890
ENSMUSG00000060224	protein_coding	Pyroxd2	ENSMUST00000236659	protein_coding		19	-1	42752775	3137
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000137182	nonsense_mediated_decay		17	-1	35910031	661
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000054279	protein_coding		1	1	85650014	1978
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000173117	retained_intron		6	-1	116110394	5486
ENSMUSG00000033688	protein_coding	1300017J02Rik	ENSMUST00000150524	processed_transcript		9	-1	103288297	2470
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000173031	protein_coding		6	-1	116171697	1024
ENSMUSG00000024426	protein_coding	Atat1	ENSMUST00000174436	retained_intron		17	-1	35910009	441
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000204637	retained_intron		6	-1	116135122	1603
ENSMUSG00000084087	processed_pseudogene	Gm13650	ENSMUST00000117729	processed_pseudogene		2	-1	77256423	433
ENSMUSG00000033688	protein_coding	1300017J02Rik	ENSMUST00000142540	protein_coding		9	-1	103305082	396
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000147552	protein_coding		1	1	85650014	1597
ENSMUSG00000030126	protein_coding	Tmcc1	ENSMUST00000204574	retained_intron		6	-1	116174313	2697
ENSMUSG00000097827	bidirectional_promoter_lncRNA	5330439K02Rik	ENSMUST00000180953	bidirectional_promoter_lncRNA		15	-1	100468691	2312
ENSMUSG00000027374	protein_coding	Mrps5	ENSMUST00000134101	retained_intron		2	1	127587419	812
ENSMUSG00000039296	protein_coding	Spdye4a	ENSMUST00000085733	protein_coding	principal2	5	-1	143225882	1819
ENSMUSG00000060224	protein_coding	Pyroxd2	ENSMUST00000235183	nonsense_mediated_decay		19	-1	42752472	2093
ENSMUSG00000029022	protein_coding	Miip	ENSMUST00000156374	retained_intron		4	-1	147868499	1909
ENSMUSG00000007476	protein_coding	Lrrc8a	ENSMUST00000095078	protein_coding	principal1	2	1	30237722	4301
ENSMUSG00000039296	protein_coding	Spdye4a	ENSMUST00000195900	protein_coding	alternative2	5	-1	143226864	1496
ENSMUSG00000106590	TEC	Gm42879	ENSMUST00000198656	TEC		5	1	121593695	2214
ENSMUSG00000029022	protein_coding	Miip	ENSMUST00000141534	retained_intron		4	-1	147868666	792
ENSMUSG00000008136	protein_coding	Fhl2	ENSMUST00000008280	protein_coding	principal1	1	-1	43163961	1563
ENSMUSG00000040724	protein_coding	Kcna2	ENSMUST00000197470	protein_coding	principal1	3	1	107101146	4370
ENSMUSG00000039296	protein_coding	Spdye4a	ENSMUST00000160502	protein_coding		5	-1	143226890	1245
ENSMUSG00000081287	transcribed_unprocessed_pseudogene	Olfr333-ps1	ENSMUST00000218459	processed_transcript		11	-1	58481400	1993
ENSMUSG00000029022	protein_coding	Miip	ENSMUST00000141166	retained_intron		4	-1	147865537	698
ENSMUSG00000102438	processed_pseudogene	Gm17953	ENSMUST00000192061	processed_pseudogene		3	-1	78865563	667
ENSMUSG00000081287	transcribed_unprocessed_pseudogene	Olfr333-ps1	ENSMUST00000122311	transcribed_unprocessed_pseudogene		11	-1	58478273	940
ENSMUSG00000029022	protein_coding	Miip	ENSMUST00000174081	retained_intron		4	-1	147868523	452
ENSMUSG00000025977	protein_coding	Boll	ENSMUST00000114423	protein_coding		1	-1	55362726	1106
ENSMUSG00000060224	protein_coding	Pyroxd2	ENSMUST00000237747	protein_coding		19	-1	42752504	1903
ENSMUSG00000008136	protein_coding	Fhl2	ENSMUST00000185893	protein_coding	principal1	1	-1	43196984	1421
ENSMUSG00000027374	protein_coding	Mrps5	ENSMUST00000128535	retained_intron		2	1	127587419	3228
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000153574	protein_coding		1	1	85650014	1653
ENSMUSG00000093493	unprocessed_pseudogene	Vmn2r-ps133	ENSMUST00000176979	unprocessed_pseudogene		17	-1	23277178	2569
ENSMUSG00000091361	processed_pseudogene	Gm5277	ENSMUST00000164923	processed_pseudogene		3	-1	78892422	556
ENSMUSG00000060224	protein_coding	Pyroxd2	ENSMUST00000238158	retained_intron		19	-1	42752775	869
ENSMUSG00000060224	protein_coding	Pyroxd2	ENSMUST00000076505	protein_coding	principal1	19	-1	42752775	3119
ENSMUSG00000027374	protein_coding	Mrps5	ENSMUST00000146131	protein_coding		2	1	127590441	424
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000150967	protein_coding		1	1	85650015	1343
ENSMUSG00000070443	processed_pseudogene	Gm10291	ENSMUST00000094175	processed_pseudogene		3	1	78917258	999
ENSMUSG00000027374	protein_coding	Mrps5	ENSMUST00000126491	retained_intron		2	1	127595673	451
ENSMUSG00000008136	protein_coding	Fhl2	ENSMUST00000187357	protein_coding		1	-1	43196761	344
ENSMUSG00000037096	processed_pseudogene	Gm9762	ENSMUST00000036976	processed_pseudogene		3	-1	78966799	444
ENSMUSG00000040724	protein_coding	Kcna2	ENSMUST00000038695	protein_coding	principal1	3	1	107101567	11582
ENSMUSG00000087069	lincRNA	Gm13793	ENSMUST00000124214	lincRNA		2	-1	94730738	438
ENSMUSG00000035597	protein_coding	Prpf39	ENSMUST00000220798	retained_intron		12	1	65036334	3457
ENSMUSG00000118354	antisense	Gm19437	ENSMUST00000236540	antisense		19	1	42745771	400
ENSMUSG00000027374	protein_coding	Mrps5	ENSMUST00000145271	retained_intron		2	1	127599826	718
ENSMUSG00000006398	protein_coding	Cdc20	ENSMUST00000006565	protein_coding	principal1	4	-1	118437352	1793
ENSMUSG00000027374	protein_coding	Mrps5	ENSMUST00000129066	retained_intron		2	1	127600033	443
ENSMUSG00000084906	lincRNA	Gm13794	ENSMUST00000148637	lincRNA		2	1	95394242	468
ENSMUSG00000040724	protein_coding	Kcna2	ENSMUST00000196403	protein_coding	principal1	3	1	107102682	2430
ENSMUSG00000084159	processed_pseudogene	Gm12696	ENSMUST00000122361	processed_pseudogene		4	-1	97522332	905
ENSMUSG00000089879	lincRNA	4930448H16Rik	ENSMUST00000159838	lincRNA		5	1	143227718	580
ENSMUSG00000082054	processed_pseudogene	Psmb6-ps	ENSMUST00000117520	processed_pseudogene		X	-1	7950868	713
ENSMUSG00000081757	processed_pseudogene	Gm13798	ENSMUST00000118285	processed_pseudogene		2	1	95677717	139
ENSMUSG00000002190	protein_coding	Clgn	ENSMUST00000002259	protein_coding	principal1	8	1	83389867	3902
ENSMUSG00000082683	processed_pseudogene	Gm12697	ENSMUST00000118008	processed_pseudogene		4	-1	97557070	667
ENSMUSG00000035597	protein_coding	Prpf39	ENSMUST00000129956	nonsense_mediated_decay		12	1	65036366	4314
ENSMUSG00000006398	protein_coding	Cdc20	ENSMUST00000183942	nonsense_mediated_decay		4	-1	118436578	771
ENSMUSG00000035597	protein_coding	Prpf39	ENSMUST00000222154	retained_intron		12	1	65043003	1779
ENSMUSG00000006398	protein_coding	Cdc20	ENSMUST00000151302	retained_intron		4	-1	118435821	526
ENSMUSG00000001473	protein_coding	Tubb6	ENSMUST00000001513	protein_coding	principal1	18	1	67390717	1758
ENSMUSG00000035597	protein_coding	Prpf39	ENSMUST00000223341	nonsense_mediated_decay		12	1	65043290	297
ENSMUSG00000083875	processed_pseudogene	Gm13831	ENSMUST00000118764	processed_pseudogene		5	1	115263093	302
ENSMUSG00000002190	protein_coding	Clgn	ENSMUST00000109831	protein_coding	principal1	8	1	83389878	2293
ENSMUSG00000025977	protein_coding	Boll	ENSMUST00000087585	protein_coding	principal1	1	-1	55363319	882
ENSMUSG00000035597	protein_coding	Prpf39	ENSMUST00000223315	protein_coding		12	1	65043327	732
ENSMUSG00000001473	protein_coding	Tubb6	ENSMUST00000236667	retained_intron		18	1	67392267	911
ENSMUSG00000020801	protein_coding	Med31	ENSMUST00000021157	protein_coding	principal1	11	-1	72215592	1161
ENSMUSG00000038692	protein_coding	Hoxb4	ENSMUST00000049241	protein_coding	principal1	11	1	96318267	2566
ENSMUSG00000025977	protein_coding	Boll	ENSMUST00000159564	nonsense_mediated_decay		1	-1	55363319	751
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000066427	protein_coding	principal1	1	1	85650050	2708
ENSMUSG00000013076	protein_coding	Amotl1	ENSMUST00000013220	protein_coding	principal2	9	-1	14615006	8957
ENSMUSG00000035597	protein_coding	Prpf39	ENSMUST00000220462	retained_intron		12	1	65043348	2777
ENSMUSG00000083846	processed_pseudogene	Gm13797	ENSMUST00000121792	processed_pseudogene		2	-1	95698036	120
ENSMUSG00000035597	protein_coding	Prpf39	ENSMUST00000223105	retained_intron		12	1	65043992	1692
ENSMUSG00000025977	protein_coding	Boll	ENSMUST00000159398	protein_coding		1	-1	55363469	658
ENSMUSG00000035597	protein_coding	Prpf39	ENSMUST00000221221	retained_intron		12	1	65048316	1810
ENSMUSG00000025977	protein_coding	Boll	ENSMUST00000174065	processed_transcript		1	-1	55360741	147
ENSMUSG00000020801	protein_coding	Med31	ENSMUST00000129264	retained_intron		11	-1	72215053	837
ENSMUSG00000081788	processed_pseudogene	Gm5898	ENSMUST00000121016	processed_pseudogene		7	1	63542479	2071
ENSMUSG00000034021	protein_coding	Pds5b	ENSMUST00000202170	protein_coding	alternative2	5	1	150673739	6598
ENSMUSG00000090733	protein_coding	Rps27	ENSMUST00000196205	protein_coding		3	-1	90213301	452
ENSMUSG00000093751	processed_pseudogene	Gm3307	ENSMUST00000176164	processed_pseudogene		7	1	63606019	632
ENSMUSG00000019893	protein_coding	Ros1	ENSMUST00000020045	protein_coding	principal2	10	-1	52195244	7401
ENSMUSG00000039021	protein_coding	Ttc16	ENSMUST00000091059	protein_coding	alternative2	2	-1	32775383	2388
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000129951	processed_transcript		1	1	85671825	833
ENSMUSG00000035597	protein_coding	Prpf39	ENSMUST00000220729	retained_intron		12	1	65051111	3917
ENSMUSG00000053574	protein_coding	4930563E22Rik	ENSMUST00000066087	protein_coding	principal1	11	1	72215138	2606
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000140758	retained_intron		1	1	85673717	395
ENSMUSG00000019893	protein_coding	Ros1	ENSMUST00000218452	protein_coding	alternative2	10	-1	52194956	6960
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000134283	retained_intron		1	1	85693939	541
ENSMUSG00000053574	protein_coding	4930563E22Rik	ENSMUST00000124762	nonsense_mediated_decay		11	1	72215172	1427
ENSMUSG00000090733	protein_coding	Rps27	ENSMUST00000197028	retained_intron		3	-1	90213633	528
ENSMUSG00000090733	protein_coding	Rps27	ENSMUST00000199031	retained_intron		3	-1	90213634	640
ENSMUSG00000109728	lincRNA	Gm45359	ENSMUST00000210635	lincRNA		8	1	57658262	427
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000220957	retained_intron		12	-1	65071133	1910
ENSMUSG00000019893	protein_coding	Ros1	ENSMUST00000219692	nonsense_mediated_decay		10	-1	52194956	6372
ENSMUSG00000090733	protein_coding	Rps27	ENSMUST00000195998	protein_coding		3	-1	90213647	458
ENSMUSG00000093563	processed_pseudogene	Gm20630	ENSMUST00000177387	processed_pseudogene		10	-1	52119869	551
ENSMUSG00000110419	bidirectional_promoter_lncRNA	AW046200	ENSMUST00000211284	bidirectional_promoter_lncRNA		8	1	57651757	612
ENSMUSG00000039021	protein_coding	Ttc16	ENSMUST00000066478	protein_coding	alternative2	2	-1	32775339	2979
ENSMUSG00000015474	protein_coding	Ppt2	ENSMUST00000171121	protein_coding	principal1	17	-1	34627435	1710
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000222684	retained_intron		12	-1	65071140	6939
ENSMUSG00000013076	protein_coding	Amotl1	ENSMUST00000160770	processed_transcript		9	-1	14643529	3274
ENSMUSG00000034021	protein_coding	Pds5b	ENSMUST00000016569	protein_coding	principal3	5	1	150673739	7417
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000221166	nonsense_mediated_decay		12	-1	65073962	981
ENSMUSG00000090733	protein_coding	Rps27	ENSMUST00000200305	retained_intron		3	-1	90213623	546
ENSMUSG00000110419	bidirectional_promoter_lncRNA	AW046200	ENSMUST00000210975	bidirectional_promoter_lncRNA		8	1	57652762	1446
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000132641	protein_coding		1	1	85694297	1197
ENSMUSG00000035629	protein_coding	Rubcn	ENSMUST00000089684	protein_coding	alternative2	16	-1	32868339	5311
ENSMUSG00000013076	protein_coding	Amotl1	ENSMUST00000223132	protein_coding	alternative2	9	-1	14645056	3046
ENSMUSG00000110419	bidirectional_promoter_lncRNA	AW046200	ENSMUST00000211787	bidirectional_promoter_lncRNA		8	1	57660952	2479
ENSMUSG00000026222	protein_coding	Sp100	ENSMUST00000141709	protein_coding		1	1	85703442	409
ENSMUSG00000090733	protein_coding	Rps27	ENSMUST00000197361	protein_coding		3	-1	90213648	329
ENSMUSG00000028874	protein_coding	Fgr	ENSMUST00000030693	protein_coding	principal1	4	1	132974102	3363
ENSMUSG00000066372	protein_coding	Vmn2r65	ENSMUST00000044583	protein_coding	principal1	7	-1	84964115	7248
ENSMUSG00000015474	protein_coding	Ppt2	ENSMUST00000064953	protein_coding	principal1	17	-1	34627377	1729
ENSMUSG00000013076	protein_coding	Amotl1	ENSMUST00000161171	retained_intron		9	-1	14559051	685
ENSMUSG00000090733	protein_coding	Rps27	ENSMUST00000170122	protein_coding	principal1	3	-1	90213651	345
ENSMUSG00000034021	protein_coding	Pds5b	ENSMUST00000133738	retained_intron		5	1	150747822	584
ENSMUSG00000066372	protein_coding	Vmn2r65	ENSMUST00000232823	nonsense_mediated_decay		7	-1	84964115	7926
ENSMUSG00000052889	protein_coding	Prkcb	ENSMUST00000143692	nonsense_mediated_decay		7	1	122288751	3328
ENSMUSG00000066372	protein_coding	Vmn2r65	ENSMUST00000233024	retained_intron		7	-1	84964115	9725
ENSMUSG00000066372	protein_coding	Vmn2r65	ENSMUST00000233469	protein_coding		7	-1	84964115	6447
ENSMUSG00000039021	protein_coding	Ttc16	ENSMUST00000161430	protein_coding	principal3	2	-1	32775584	2874
ENSMUSG00000013076	protein_coding	Amotl1	ENSMUST00000162901	protein_coding		9	-1	14615483	701
ENSMUSG00000070031	protein_coding	Sp140	ENSMUST00000113385	nonsense_mediated_decay		1	1	85600378	485
ENSMUSG00000091945	protein_coding	Vmn2r114	ENSMUST00000168033	protein_coding	principal1	17	-1	23312428	8228
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000160844	protein_coding	principal4	17	-1	91093071	9309
ENSMUSG00000090733	protein_coding	Rps27	ENSMUST00000199428	retained_intron		3	-1	90213646	672
ENSMUSG00000034021	protein_coding	Pds5b	ENSMUST00000110486	protein_coding		5	1	150756303	2900
ENSMUSG00000013076	protein_coding	Amotl1	ENSMUST00000162802	processed_transcript		9	-1	14614586	499
ENSMUSG00000091945	protein_coding	Vmn2r114	ENSMUST00000234051	nonsense_mediated_decay		17	-1	23312428	13307
ENSMUSG00000090733	protein_coding	Rps27	ENSMUST00000196196	retained_intron		3	-1	90213645	279
ENSMUSG00000091945	protein_coding	Vmn2r114	ENSMUST00000234738	retained_intron		17	-1	23312428	9798
ENSMUSG00000035629	protein_coding	Rubcn	ENSMUST00000040986	protein_coding	principal3	16	-1	32868351	5257
ENSMUSG00000091945	protein_coding	Vmn2r114	ENSMUST00000234493	nonsense_mediated_decay		17	-1	23312537	11539
ENSMUSG00000111540	TEC	4930584E12Rik	ENSMUST00000216646	TEC		9	-1	14619565	981
ENSMUSG00000034021	protein_coding	Pds5b	ENSMUST00000154083	processed_transcript		5	1	150759364	668
ENSMUSG00000028551	protein_coding	Cdkn2c	ENSMUST00000097921	protein_coding	principal1	4	-1	109667189	2471
ENSMUSG00000039021	protein_coding	Ttc16	ENSMUST00000161089	protein_coding	alternative2	2	-1	32775330	2582
ENSMUSG00000052889	protein_coding	Prkcb	ENSMUST00000064989	protein_coding	principal3	7	1	122289297	2911
ENSMUSG00000066043	protein_coding	Phactr4	ENSMUST00000102568	protein_coding	principal2	4	-1	132422489	4614
ENSMUSG00000034021	protein_coding	Pds5b	ENSMUST00000201920	processed_transcript		5	1	150793577	723
ENSMUSG00000028874	protein_coding	Fgr	ENSMUST00000138179	processed_transcript		4	1	132977116	2398
ENSMUSG00000034021	protein_coding	Pds5b	ENSMUST00000132947	retained_intron		5	1	150805229	3152
ENSMUSG00000066043	protein_coding	Phactr4	ENSMUST00000084249	protein_coding	alternative2	4	-1	132398211	2349
ENSMUSG00000039021	protein_coding	Ttc16	ENSMUST00000161950	protein_coding	alternative2	2	-1	32775339	2639
ENSMUSG00000087537	lincRNA	Gm13799	ENSMUST00000138883	lincRNA		2	1	95838088	838
ENSMUSG00000028551	protein_coding	Cdkn2c	ENSMUST00000063531	protein_coding	principal1	4	-1	109665372	1106
ENSMUSG00000028874	protein_coding	Fgr	ENSMUST00000124451	processed_transcript		4	1	132974095	385
ENSMUSG00000050705	protein_coding	2310061I04Rik	ENSMUST00000148482	protein_coding		17	-1	35897120	1193
ENSMUSG00000052889	protein_coding	Prkcb	ENSMUST00000064921	protein_coding	alternative1	7	1	122289309	2557
ENSMUSG00000028859	protein_coding	Csf3r	ENSMUST00000106162	protein_coding	principal1	4	1	126024550	3481
ENSMUSG00000028874	protein_coding	Fgr	ENSMUST00000171223	protein_coding	principal1	4	1	132977116	2398
ENSMUSG00000015474	protein_coding	Ppt2	ENSMUST00000171376	protein_coding	principal1	17	-1	34627148	1750
ENSMUSG00000066043	protein_coding	Phactr4	ENSMUST00000127516	processed_transcript		4	-1	132370531	684
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000235766	protein_coding		18	-1	64489050	6427
ENSMUSG00000034021	protein_coding	Pds5b	ENSMUST00000038900	protein_coding	alternative2	5	1	150673827	7315
ENSMUSG00000028859	protein_coding	Csf3r	ENSMUST00000153968	processed_transcript		4	1	126024726	696
ENSMUSG00000110555	polymorphic_pseudogene	Olfr863-ps1	ENSMUST00000213073	polymorphic_pseudogene	principal1	9	-1	19942438	929
ENSMUSG00000056305	protein_coding	Usp39	ENSMUST00000070345	protein_coding	principal1	6	-1	72345184	2244
ENSMUSG00000035629	protein_coding	Rubcn	ENSMUST00000135480	retained_intron		16	-1	32838594	2301
ENSMUSG00000082481	processed_pseudogene	Rps12-ps19	ENSMUST00000119773	processed_pseudogene		11	-1	75071213	400
ENSMUSG00000039021	protein_coding	Ttc16	ENSMUST00000125891	nonsense_mediated_decay		2	-1	32775633	3714
ENSMUSG00000052889	protein_coding	Prkcb	ENSMUST00000131167	processed_transcript		7	1	122290028	409
ENSMUSG00000004885	protein_coding	Crabp2	ENSMUST00000005019	protein_coding	principal1	3	1	87948666	931
ENSMUSG00000028859	protein_coding	Csf3r	ENSMUST00000140426	processed_transcript		4	1	126038084	921
ENSMUSG00000066043	protein_coding	Phactr4	ENSMUST00000152271	protein_coding		4	-1	132422441	1029
ENSMUSG00000110560	unprocessed_pseudogene	Olfr864-ps1	ENSMUST00000212664	unprocessed_pseudogene		9	1	19996433	930
ENSMUSG00000050705	protein_coding	2310061I04Rik	ENSMUST00000148721	protein_coding	principal1	17	-1	35897431	1293
ENSMUSG00000110566	unprocessed_pseudogene	Olfr865-ps1	ENSMUST00000212071	unprocessed_pseudogene		9	-1	20024768	85
ENSMUSG00000066043	protein_coding	Phactr4	ENSMUST00000136711	protein_coding		4	-1	132398199	675
ENSMUSG00000035629	protein_coding	Rubcn	ENSMUST00000119810	protein_coding	alternative2	16	-1	32877766	3371
ENSMUSG00000039021	protein_coding	Ttc16	ENSMUST00000123674	retained_intron		2	-1	32775587	1612
ENSMUSG00000052889	protein_coding	Prkcb	ENSMUST00000149583	processed_transcript		7	1	122416068	329
ENSMUSG00000004885	protein_coding	Crabp2	ENSMUST00000163040	retained_intron		3	1	87952144	658
ENSMUSG00000056305	protein_coding	Usp39	ENSMUST00000154799	retained_intron		6	-1	72333368	751
ENSMUSG00000035629	protein_coding	Rubcn	ENSMUST00000152920	retained_intron		16	-1	32829718	664
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000197268	protein_coding		17	-1	90088396	2280
ENSMUSG00000039021	protein_coding	Ttc16	ENSMUST00000161958	protein_coding		2	-1	32775631	352
ENSMUSG00000052889	protein_coding	Prkcb	ENSMUST00000205550	retained_intron		7	1	122593921	2794
ENSMUSG00000056305	protein_coding	Usp39	ENSMUST00000206262	nonsense_mediated_decay		6	-1	72342968	701
ENSMUSG00000035629	protein_coding	Rubcn	ENSMUST00000153556	retained_intron		16	-1	32836571	653
ENSMUSG00000026258	protein_coding	Snorc	ENSMUST00000027476	protein_coding	principal1	1	1	87470271	478
ENSMUSG00000103792	processed_pseudogene	Gm3745	ENSMUST00000193773	processed_pseudogene		3	1	87968186	421
ENSMUSG00000060152	protein_coding	Pop5	ENSMUST00000081497	protein_coding	principal1	5	1	115235836	1025
ENSMUSG00000050705	protein_coding	2310061I04Rik	ENSMUST00000154670	protein_coding		17	-1	35895313	658
ENSMUSG00000035629	protein_coding	Rubcn	ENSMUST00000149621	processed_transcript		16	-1	32868338	404
ENSMUSG00000028859	protein_coding	Csf3r	ENSMUST00000030673	protein_coding	principal1	4	1	126027292	3160
ENSMUSG00000052889	protein_coding	Prkcb	ENSMUST00000127910	processed_transcript		7	1	122599982	770
ENSMUSG00000066043	protein_coding	Phactr4	ENSMUST00000084170	protein_coding		4	-1	132422446	4483
ENSMUSG00000050705	protein_coding	2310061I04Rik	ENSMUST00000146451	protein_coding		17	-1	35897111	2081
ENSMUSG00000052889	protein_coding	Prkcb	ENSMUST00000206495	retained_intron		7	1	122633448	955
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000174331	protein_coding	alternative1	17	-1	91088915	6282
ENSMUSG00000015474	protein_coding	Ppt2	ENSMUST00000168391	protein_coding	principal1	17	-1	34627485	1342
ENSMUSG00000026258	protein_coding	Snorc	ENSMUST00000191095	processed_transcript		1	1	87472539	557
ENSMUSG00000108317	TEC	Gm44663	ENSMUST00000206898	TEC		7	1	122402455	3150
ENSMUSG00000050705	protein_coding	2310061I04Rik	ENSMUST00000059740	protein_coding		17	-1	35895920	769
ENSMUSG00000104258	TEC	Gm37175	ENSMUST00000192023	TEC		2	1	95867926	587
ENSMUSG00000060152	protein_coding	Pop5	ENSMUST00000154800	processed_transcript		5	1	115237979	380
ENSMUSG00000108455	TEC	Gm44745	ENSMUST00000206563	TEC		7	1	122463438	2723
ENSMUSG00000028643	protein_coding	Svbp	ENSMUST00000030395	protein_coding	principal1	4	1	119195306	733
ENSMUSG00000015474	protein_coding	Ppt2	ENSMUST00000169067	protein_coding	principal1	17	-1	34627525	1392
ENSMUSG00000087520	processed_pseudogene	Gm14389	ENSMUST00000140453	processed_pseudogene		7	-1	122484420	241
ENSMUSG00000050705	protein_coding	2310061I04Rik	ENSMUST00000150056	protein_coding		17	-1	35897073	596
ENSMUSG00000050813	protein_coding	Olfr332	ENSMUST00000180165	protein_coding	principal1	11	-1	58492555	3426
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000159778	protein_coding		17	-1	90455872	3414
ENSMUSG00000084230	processed_pseudogene	Gm14388	ENSMUST00000118119	processed_pseudogene		7	1	122442023	477
ENSMUSG00000033510	protein_coding	Otud7a	ENSMUST00000058476	protein_coding	principal1	7	1	63444751	3483
ENSMUSG00000060152	protein_coding	Pop5	ENSMUST00000135455	nonsense_mediated_decay		5	1	115238032	1587
ENSMUSG00000050705	protein_coding	2310061I04Rik	ENSMUST00000151274	processed_transcript		17	-1	35896608	651
ENSMUSG00000015474	protein_coding	Ppt2	ENSMUST00000166040	protein_coding	principal1	17	-1	34628039	1139
ENSMUSG00000033510	protein_coding	Otud7a	ENSMUST00000176734	processed_transcript		7	1	63444777	396
ENSMUSG00000020994	protein_coding	Pnn	ENSMUST00000021381	protein_coding	principal1	12	1	59066884	3485
ENSMUSG00000050705	protein_coding	2310061I04Rik	ENSMUST00000156817	protein_coding		17	-1	35897103	398
ENSMUSG00000028643	protein_coding	Svbp	ENSMUST00000106345	protein_coding		4	1	119195407	684
ENSMUSG00000050813	protein_coding	Olfr332	ENSMUST00000203744	protein_coding		11	-1	58492513	573
ENSMUSG00000015474	protein_coding	Ppt2	ENSMUST00000169969	protein_coding		17	-1	34626928	772
ENSMUSG00000050705	protein_coding	2310061I04Rik	ENSMUST00000154272	processed_transcript		17	-1	35897312	295
ENSMUSG00000060152	protein_coding	Pop5	ENSMUST00000128830	processed_transcript		5	1	115238035	575
ENSMUSG00000033510	protein_coding	Otud7a	ENSMUST00000177534	protein_coding		7	1	63650815	2057
ENSMUSG00000035629	protein_coding	Rubcn	ENSMUST00000115105	protein_coding	alternative2	16	-1	32868366	5255
ENSMUSG00000060152	protein_coding	Pop5	ENSMUST00000142233	retained_intron		5	1	115238047	529
ENSMUSG00000033510	protein_coding	Otud7a	ENSMUST00000177511	protein_coding		7	1	63754712	651
ENSMUSG00000108435	antisense	Gm45051	ENSMUST00000206838	antisense		6	-1	72348458	963
ENSMUSG00000060152	protein_coding	Pop5	ENSMUST00000140083	processed_transcript		5	1	115240341	428
ENSMUSG00000058706	protein_coding	0610030E20Rik	ENSMUST00000205578	retained_intron		6	1	72347317	3900
ENSMUSG00000028643	protein_coding	Svbp	ENSMUST00000097908	protein_coding		4	1	119195496	832
ENSMUSG00000058706	protein_coding	0610030E20Rik	ENSMUST00000205472	retained_intron		6	1	72347326	1033
ENSMUSG00000015474	protein_coding	Ppt2	ENSMUST00000167097	protein_coding		17	-1	34628510	1111
ENSMUSG00000028643	protein_coding	Svbp	ENSMUST00000210595	protein_coding		4	1	119195908	150
ENSMUSG00000043932	protein_coding	Klri2	ENSMUST00000050385	protein_coding	principal1	6	-1	129740484	3913
ENSMUSG00000020994	protein_coding	Pnn	ENSMUST00000217773	retained_intron		12	1	59066922	2924
ENSMUSG00000015474	protein_coding	Ppt2	ENSMUST00000170345	protein_coding		17	-1	34627426	673
ENSMUSG00000015474	protein_coding	Ppt2	ENSMUST00000169287	protein_coding		17	-1	34627150	344
ENSMUSG00000109651	processed_transcript	Gm45463	ENSMUST00000210764	lincRNA		8	1	93011619	582
ENSMUSG00000020994	protein_coding	Pnn	ENSMUST00000219176	nonsense_mediated_decay		12	1	59066943	405
ENSMUSG00000109651	processed_transcript	Gm45463	ENSMUST00000210735	antisense		8	1	93027231	1188
ENSMUSG00000109651	processed_transcript	Gm45463	ENSMUST00000209831	lincRNA		8	1	93031799	977
ENSMUSG00000020994	protein_coding	Pnn	ENSMUST00000217676	retained_intron		12	1	59066964	631
ENSMUSG00000027375	protein_coding	Mal	ENSMUST00000028854	protein_coding	principal1	2	-1	127656695	2778
ENSMUSG00000000247	protein_coding	Lhx2	ENSMUST00000143783	protein_coding		2	1	38339281	1696
ENSMUSG00000109460	sense_intronic	Gm45591	ENSMUST00000129058	sense_intronic		7	1	99321200	843
ENSMUSG00000092176	processed_transcript	Gm20460	ENSMUST00000168709	processed_transcript		17	-1	34627349	1572
ENSMUSG00000034773	protein_coding	Hrob	ENSMUST00000133930	nonsense_mediated_decay		11	1	102248882	2813
ENSMUSG00000048763	protein_coding	Hoxb3	ENSMUST00000093944	protein_coding	principal1	11	1	96323326	3190
ENSMUSG00000000247	protein_coding	Lhx2	ENSMUST00000149664	retained_intron		2	1	38339488	701
ENSMUSG00000021278	protein_coding	Amn	ENSMUST00000021707	protein_coding	principal1	12	1	111271095	1701
ENSMUSG00000009563	protein_coding	Tor2a	ENSMUST00000009707	protein_coding	principal1	2	1	32757234	1536
ENSMUSG00000105271	antisense	Gm42875	ENSMUST00000197674	antisense		5	1	128769524	1015
ENSMUSG00000048763	protein_coding	Hoxb3	ENSMUST00000123091	protein_coding		11	1	96328062	664
ENSMUSG00000034773	protein_coding	Hrob	ENSMUST00000100392	protein_coding	principal1	11	1	102248882	2547
ENSMUSG00000000247	protein_coding	Lhx2	ENSMUST00000133661	protein_coding		2	1	38341092	654
ENSMUSG00000021278	protein_coding	Amn	ENSMUST00000220903	retained_intron		12	1	111274514	353
ENSMUSG00000009563	protein_coding	Tor2a	ENSMUST00000177382	protein_coding		2	1	32757245	396
ENSMUSG00000048763	protein_coding	Hoxb3	ENSMUST00000143462	processed_transcript		11	1	96340945	446
ENSMUSG00000027375	protein_coding	Mal	ENSMUST00000028853	protein_coding		2	-1	127656219	486
ENSMUSG00000058706	protein_coding	0610030E20Rik	ENSMUST00000077783	protein_coding	principal1	6	1	72347334	4605
ENSMUSG00000048763	protein_coding	Hoxb3	ENSMUST00000055334	protein_coding	principal1	11	1	96343769	1890
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000236586	protein_coding	principal2	18	-1	64489100	6571
ENSMUSG00000070031	protein_coding	Sp140	ENSMUST00000080204	protein_coding	principal1	1	1	85600703	2417
ENSMUSG00000021278	protein_coding	Amn	ENSMUST00000220551	retained_intron		12	1	111274674	1024
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000173917	protein_coding		17	-1	90088400	1439
ENSMUSG00000034773	protein_coding	Hrob	ENSMUST00000148867	processed_transcript		11	1	102255652	691
ENSMUSG00000034773	protein_coding	Hrob	ENSMUST00000152897	processed_transcript		11	1	102255656	769
ENSMUSG00000075589	antisense	Gm11536	ENSMUST00000130733	antisense		11	-1	96342108	535
ENSMUSG00000034773	protein_coding	Hrob	ENSMUST00000140040	processed_transcript		11	1	102261964	890
ENSMUSG00000058706	protein_coding	0610030E20Rik	ENSMUST00000204152	retained_intron		6	1	72347367	2118
ENSMUSG00000070031	protein_coding	Sp140	ENSMUST00000162925	protein_coding		1	1	85610833	596
ENSMUSG00000070031	protein_coding	Sp140	ENSMUST00000161497	protein_coding		1	1	85632478	814
ENSMUSG00000084844	antisense	Hoxb3os	ENSMUST00000147410	antisense		11	-1	96354691	1945
ENSMUSG00000070031	protein_coding	Sp140	ENSMUST00000159234	processed_transcript		1	1	85635384	727
ENSMUSG00000009563	protein_coding	Tor2a	ENSMUST00000156617	nonsense_mediated_decay		2	1	32757255	915
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000174337	protein_coding		17	-1	90455886	3021
ENSMUSG00000035692	protein_coding	Isg15	ENSMUST00000085425	protein_coding	principal1	4	-1	156200796	703
ENSMUSG00000067873	protein_coding	Htatsf1	ENSMUST00000114751	protein_coding		X	1	57053583	1128
ENSMUSG00000108212	processed_pseudogene	Gm44132	ENSMUST00000205142	processed_pseudogene		6	1	123114595	151
ENSMUSG00000009563	protein_coding	Tor2a	ENSMUST00000175763	nonsense_mediated_decay		2	1	32757260	1244
ENSMUSG00000084844	antisense	Hoxb3os	ENSMUST00000131275	antisense		11	-1	96347923	2315
ENSMUSG00000075588	protein_coding	Hoxb2	ENSMUST00000182030	retained_intron		11	1	96350525	3134
ENSMUSG00000070031	protein_coding	Sp140	ENSMUST00000160119	retained_intron		1	1	85642989	807
ENSMUSG00000009563	protein_coding	Tor2a	ENSMUST00000149720	retained_intron		2	1	32757276	2712
ENSMUSG00000083743	processed_pseudogene	Gm12421	ENSMUST00000119071	processed_pseudogene		4	-1	84429124	307
ENSMUSG00000024038	protein_coding	Ndufv3	ENSMUST00000064798	protein_coding	alternative2	17	1	31520115	493
ENSMUSG00000090246	antisense	Gm17017	ENSMUST00000161540	antisense		1	-1	85650585	2405
ENSMUSG00000009563	protein_coding	Tor2a	ENSMUST00000123624	processed_transcript		2	1	32757291	256
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000237717	processed_transcript		18	-1	64479415	2171
ENSMUSG00000109968	processed_pseudogene	Gm45612	ENSMUST00000211320	processed_pseudogene		7	1	113592862	160
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000161402	protein_coding	alternative1	17	-1	91088726	4953
ENSMUSG00000009563	protein_coding	Tor2a	ENSMUST00000140999	protein_coding		2	1	32757319	804
ENSMUSG00000000247	protein_coding	Lhx2	ENSMUST00000000253	protein_coding	principal1	2	1	38350759	2840
ENSMUSG00000009563	protein_coding	Tor2a	ENSMUST00000149987	retained_intron		2	1	32760295	716
ENSMUSG00000030148	protein_coding	Clec4a2	ENSMUST00000159891	protein_coding		6	1	123106428	584
ENSMUSG00000073862	lincRNA	Gm5600	ENSMUST00000211589	lincRNA		7	-1	113708442	2331
ENSMUSG00000117715	lincRNA	Gm50413	ENSMUST00000236434	lincRNA		18	-1	83399621	411
ENSMUSG00000048388	protein_coding	Fam171b	ENSMUST00000051454	protein_coding	principal1	2	1	83812636	5614
ENSMUSG00000073862	lincRNA	Gm5600	ENSMUST00000098100	lincRNA		7	-1	113708200	486
ENSMUSG00000000247	protein_coding	Lhx2	ENSMUST00000176229	nonsense_mediated_decay		2	1	38351768	592
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000173222	protein_coding		17	-1	90088140	859
ENSMUSG00000101755	lincRNA	Gm29507	ENSMUST00000187378	lincRNA		7	1	113729654	2088
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000054059	protein_coding	alternative1	17	-1	91088726	4697
ENSMUSG00000118060	lincRNA	4933401L05Rik	ENSMUST00000236210	lincRNA		18	-1	83423479	1336
ENSMUSG00000048388	protein_coding	Fam171b	ENSMUST00000148184	processed_transcript		2	1	83858088	353
ENSMUSG00000000247	protein_coding	Lhx2	ENSMUST00000155964	protein_coding		2	1	38352532	375
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000130877	retained_intron		17	-1	28355066	1872
ENSMUSG00000118156	processed_pseudogene	Gm7569	ENSMUST00000236581	processed_pseudogene		18	-1	83488522	511
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000235215	nonsense_mediated_decay		18	-1	64489051	2145
ENSMUSG00000102364	IG_V_gene	Ighv8-5	ENSMUST00000194257	IG_V_gene	principal1	12	-1	115068002	358
ENSMUSG00000071047	protein_coding	Ces1a	ENSMUST00000095211	protein_coding	principal1	8	-1	93048192	1980
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000172466	protein_coding		17	-1	90455950	2477
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000235947	nonsense_mediated_decay		18	-1	64475126	1590
ENSMUSG00000000247	protein_coding	Lhx2	ENSMUST00000175896	retained_intron		2	1	38353802	1243
ENSMUSG00000075588	protein_coding	Hoxb2	ENSMUST00000100523	protein_coding	principal1	11	1	96351631	1628
ENSMUSG00000024038	protein_coding	Ndufv3	ENSMUST00000046288	protein_coding	principal4	17	1	31520118	1582
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000160800	protein_coding	alternative1	17	-1	91092733	5683
ENSMUSG00000118387	lincRNA	Gm50415	ENSMUST00000236141	lincRNA		18	1	83490414	2041
ENSMUSG00000087539	antisense	Gm13584	ENSMUST00000137134	antisense		2	-1	38363980	603
ENSMUSG00000118175	lincRNA	Gm50416	ENSMUST00000237450	lincRNA		18	-1	83525304	869
ENSMUSG00000071047	protein_coding	Ces1a	ENSMUST00000209753	processed_transcript		8	-1	93041103	556
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000197104	protein_coding		17	-1	90208422	560
ENSMUSG00000098383	antisense	Gm27197	ENSMUST00000184325	antisense		2	-1	38348316	479
ENSMUSG00000082327	processed_pseudogene	Gm13801	ENSMUST00000120750	processed_pseudogene		2	1	96133435	160
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000025484	protein_coding	alternative2	18	-1	64489063	2059
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000176918	processed_transcript		17	-1	90349360	417
ENSMUSG00000024038	protein_coding	Ndufv3	ENSMUST00000189436	processed_transcript		17	1	31520150	2021
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000237502	protein_coding		18	-1	64489073	2630
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000237680	nonsense_mediated_decay		18	-1	64488984	1892
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000235338	retained_intron		18	-1	64479511	2361
ENSMUSG00000024038	protein_coding	Ndufv3	ENSMUST00000191598	protein_coding		17	1	31520185	645
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000237358	protein_coding	alternative2	18	-1	64490251	1753
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000238082	retained_intron		18	-1	64464326	898
ENSMUSG00000024038	protein_coding	Ndufv3	ENSMUST00000185273	processed_transcript		17	1	31529093	686
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000237891	protein_coding		18	-1	64489430	727
ENSMUSG00000028693	protein_coding	Nasp	ENSMUST00000030456	protein_coding		4	-1	116627941	2520
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000235356	retained_intron		18	-1	64472210	2210
ENSMUSG00000083036	processed_pseudogene	Gm15959	ENSMUST00000121724	processed_pseudogene		19	-1	60815816	368
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000238149	nonsense_mediated_decay		18	-1	64488941	495
ENSMUSG00000018862	protein_coding	Otop3	ENSMUST00000106543	protein_coding	alternative2	11	1	115334731	2369
ENSMUSG00000027384	protein_coding	Ndufaf5	ENSMUST00000044825	protein_coding	principal1	2	1	140170649	1166
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000196269	retained_intron		17	-1	90454822	406
ENSMUSG00000051034	protein_coding	Zfp11	ENSMUST00000049778	protein_coding	principal1	5	-1	129670099	3929
ENSMUSG00000024588	protein_coding	Fech	ENSMUST00000235843	retained_intron		18	-1	64489034	3554
ENSMUSG00000114449	processed_pseudogene	Gm48325	ENSMUST00000224563	processed_pseudogene		13	-1	46945693	504
ENSMUSG00000028693	protein_coding	Nasp	ENSMUST00000030457	protein_coding	principal1	4	-1	116627497	2118
ENSMUSG00000082945	unprocessed_pseudogene	Gm11540	ENSMUST00000117457	unprocessed_pseudogene		11	1	94607402	780
ENSMUSG00000028693	protein_coding	Nasp	ENSMUST00000081182	protein_coding		4	-1	116627478	1461
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000174021	protein_coding	alternative1	15	-1	79327964	3318
ENSMUSG00000107225	TEC	Gm43637	ENSMUST00000202206	TEC		5	1	117130323	2926
ENSMUSG00000027384	protein_coding	Ndufaf5	ENSMUST00000125913	processed_transcript		2	1	140171030	1200
ENSMUSG00000028693	protein_coding	Nasp	ENSMUST00000134038	processed_transcript		4	-1	116623922	3153
ENSMUSG00000027384	protein_coding	Ndufaf5	ENSMUST00000123078	retained_intron		2	1	140170713	509
ENSMUSG00000018862	protein_coding	Otop3	ENSMUST00000019006	protein_coding	principal3	11	1	115334734	2422
ENSMUSG00000082734	unprocessed_pseudogene	Rhox11-ps1	ENSMUST00000121945	unprocessed_pseudogene		X	-1	37933483	387
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000108344	protein_coding	principal1	7	1	27591552	4544
ENSMUSG00000118082	processed_pseudogene	Gm7326	ENSMUST00000237140	processed_pseudogene		17	1	34017040	255
ENSMUSG00000028693	protein_coding	Nasp	ENSMUST00000148436	processed_transcript		4	-1	116627448	560
ENSMUSG00000034219	protein_coding	Septin14	ENSMUST00000182381	processed_transcript		5	-1	129693232	879
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000128540	protein_coding		7	1	27592368	453
ENSMUSG00000049011	protein_coding	Olfr729	ENSMUST00000213163	protein_coding	principal1	14	-1	50152908	4283
ENSMUSG00000049011	protein_coding	Olfr729	ENSMUST00000215451	protein_coding	principal1	14	-1	50152899	4236
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000166977	protein_coding	principal3	15	-1	79328176	3365
ENSMUSG00000091076	protein_coding	Vmn2r115	ENSMUST00000168175	protein_coding	principal1	17	1	23343741	5220
ENSMUSG00000028693	protein_coding	Nasp	ENSMUST00000154811	processed_transcript		4	-1	116627493	1017
ENSMUSG00000030148	protein_coding	Clec4a2	ENSMUST00000161636	protein_coding		6	1	123122688	343
ENSMUSG00000049011	protein_coding	Olfr729	ENSMUST00000215327	protein_coding	principal1	14	-1	50152910	4220
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000108342	protein_coding		7	1	27592458	1125
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000161102	retained_intron		17	-1	91092803	4813
ENSMUSG00000034219	protein_coding	Septin14	ENSMUST00000182386	protein_coding	principal2	5	-1	129708512	1642
ENSMUSG00000050957	protein_coding	Insl6	ENSMUST00000052380	protein_coding	principal1	19	-1	29325356	708
ENSMUSG00000091076	protein_coding	Vmn2r115	ENSMUST00000234796	protein_coding		17	1	23343741	5096
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000196559	protein_coding		17	-1	90588693	706
ENSMUSG00000049011	protein_coding	Olfr729	ENSMUST00000061020	protein_coding	principal1	14	-1	50148872	972
ENSMUSG00000091076	protein_coding	Vmn2r115	ENSMUST00000234552	retained_intron		17	1	23343741	14134
ENSMUSG00000041707	protein_coding	Tmem273	ENSMUST00000039191	protein_coding	principal1	14	1	32785963	1489
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000147263	processed_transcript		7	1	27593546	685
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000176118	protein_coding		17	-1	90588842	641
ENSMUSG00000034219	protein_coding	Septin14	ENSMUST00000042266	protein_coding	alternative2	5	-1	129704259	1381
ENSMUSG00000081133	unprocessed_pseudogene	Rhox11-ps2	ENSMUST00000117962	unprocessed_pseudogene		X	-1	37945602	451
ENSMUSG00000041707	protein_coding	Tmem273	ENSMUST00000227060	protein_coding		14	1	32786027	496
ENSMUSG00000025912	protein_coding	Mybl1	ENSMUST00000088658	protein_coding	principal3	1	-1	9700209	4980
ENSMUSG00000041707	protein_coding	Tmem273	ENSMUST00000227871	nonsense_mediated_decay		14	1	32786027	560
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000138459	protein_coding		7	1	27596830	712
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000198899	retained_intron		17	-1	90456573	2797
ENSMUSG00000041707	protein_coding	Tmem273	ENSMUST00000228481	protein_coding		14	1	32786055	373
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000161637	processed_transcript		17	-1	91088483	3306
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000143499	protein_coding		7	1	27605797	417
ENSMUSG00000055407	protein_coding	Map6	ENSMUST00000122101	protein_coding	alternative2	7	1	99267447	3233
ENSMUSG00000041707	protein_coding	Tmem273	ENSMUST00000228955	retained_intron		14	1	32808234	392
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000177342	processed_transcript		17	-1	90630224	981
ENSMUSG00000068173	protein_coding	Btg1b	ENSMUST00000089286	unprocessed_pseudogene		X	-1	38018815	1560
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000197224	protein_coding		17	-1	90700774	506
ENSMUSG00000025912	protein_coding	Mybl1	ENSMUST00000115468	protein_coding	alternative1	1	-1	9700024	2493
ENSMUSG00000068173	protein_coding	Btg1b	ENSMUST00000184432	protein_coding	principal1	X	-1	38018815	825
ENSMUSG00000028693	protein_coding	Nasp	ENSMUST00000155398	processed_transcript		4	-1	116606248	1216
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000108343	protein_coding	principal1	7	1	27605817	3122
ENSMUSG00000082670	processed_pseudogene	Gm14050	ENSMUST00000117052	processed_pseudogene		2	1	122207920	346
ENSMUSG00000028693	protein_coding	Nasp	ENSMUST00000130363	processed_transcript		4	-1	116604925	905
ENSMUSG00000059695	processed_pseudogene	1700019M22Rik	ENSMUST00000073560	processed_pseudogene		12	-1	96047120	354
ENSMUSG00000025912	protein_coding	Mybl1	ENSMUST00000160022	retained_intron		1	-1	9678610	543
ENSMUSG00000109835	protein_coding	Olfr730	ENSMUST00000205837	protein_coding	alternative1	14	-1	50188198	4903
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000162227	retained_intron		17	-1	90630027	3719
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000239011	protein_coding	alternative2	11	1	87566653	3229
ENSMUSG00000112024	unprocessed_pseudogene	Gm47394	ENSMUST00000219586	unprocessed_pseudogene		12	-1	96229363	212
ENSMUSG00000109835	protein_coding	Olfr730	ENSMUST00000215779	processed_transcript		14	-1	50188189	2287
ENSMUSG00000067873	protein_coding	Htatsf1	ENSMUST00000088652	protein_coding	principal1	X	1	57053615	2810
ENSMUSG00000050803	protein_coding	Olfr866	ENSMUST00000062248	protein_coding	principal1	9	-1	20028035	1077
ENSMUSG00000025912	protein_coding	Mybl1	ENSMUST00000160451	retained_intron		1	-1	9683452	695
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000160467	retained_intron		17	-1	91092771	3097
ENSMUSG00000109835	protein_coding	Olfr730	ENSMUST00000051453	protein_coding	principal2	14	-1	50187218	957
ENSMUSG00000025912	protein_coding	Mybl1	ENSMUST00000188212	protein_coding		1	-1	9699654	799
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000173163	protein_coding	principal3	15	-1	79328203	3018
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000122945	processed_transcript		11	1	87568749	469
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000051356	protein_coding	principal1	7	1	27605858	2923
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000159419	retained_intron		17	-1	91092791	3036
ENSMUSG00000024109	protein_coding	Nrxn1	ENSMUST00000162002	retained_intron		17	-1	91092753	4299
ENSMUSG00000067873	protein_coding	Htatsf1	ENSMUST00000134785	retained_intron		X	1	57053898	2664
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000107962	protein_coding	alternative1	11	1	87578401	1678
ENSMUSG00000105779	processed_pseudogene	Gm6439	ENSMUST00000199849	processed_pseudogene		3	-1	150516081	862
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000136962	protein_coding		7	1	27607748	940
ENSMUSG00000105190	lincRNA	Gm43470	ENSMUST00000196175	lincRNA		3	1	150588739	454
ENSMUSG00000102714	TEC	Gm37618	ENSMUST00000192891	TEC		1	-1	33616832	3075
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000142365	protein_coding		7	1	27608004	448
ENSMUSG00000106620	TR_V_gene	Trav7-5	ENSMUST00000200609	TR_V_gene	principal1	14	1	53530786	337
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000047816	protein_coding	principal3	15	-1	79328228	2963
ENSMUSG00000102093	processed_pseudogene	Gm17813	ENSMUST00000185377	processed_pseudogene		1	1	33657781	328
ENSMUSG00000105190	lincRNA	Gm43470	ENSMUST00000198573	lincRNA		3	1	150588818	227
ENSMUSG00000055407	protein_coding	Map6	ENSMUST00000207883	protein_coding	principal3	7	1	99267447	3431
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000085917	protein_coding		7	1	27608662	1392
ENSMUSG00000101682	processed_pseudogene	Gm29228	ENSMUST00000185489	processed_pseudogene		1	1	33482101	418
ENSMUSG00000034254	protein_coding	Agpat1	ENSMUST00000174041	protein_coding		17	1	34604262	832
ENSMUSG00000083814	unprocessed_pseudogene	Gm5133	ENSMUST00000118940	unprocessed_pseudogene		X	-1	106309725	1255
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000021332	protein_coding	principal1	12	-1	65074007	1022
ENSMUSG00000024993	protein_coding	Fam45a	ENSMUST00000128357	protein_coding		19	1	60811585	826
ENSMUSG00000055407	protein_coding	Map6	ENSMUST00000208978	retained_intron		7	1	99267489	4778
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000143347	retained_intron		7	1	27628525	983
ENSMUSG00000084219	unprocessed_pseudogene	Gm14876	ENSMUST00000120795	unprocessed_pseudogene		X	-1	106341715	327
ENSMUSG00000019874	protein_coding	Fabp7	ENSMUST00000020024	protein_coding	principal1	10	1	57784881	804
ENSMUSG00000034254	protein_coding	Agpat1	ENSMUST00000173242	protein_coding		17	1	34604844	556
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000223167	retained_intron		12	-1	65066442	1109
ENSMUSG00000055407	protein_coding	Map6	ENSMUST00000127492	protein_coding	alternative2	7	1	99267489	4920
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000136981	retained_intron		7	1	27636053	770
ENSMUSG00000105125	lincRNA	Gm43468	ENSMUST00000199769	lincRNA		3	1	151071387	397
ENSMUSG00000106961	TEC	Gm43128	ENSMUST00000202212	TEC		2	1	35280390	1621
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000221608	protein_coding		12	-1	65066718	529
ENSMUSG00000055407	protein_coding	Map6	ENSMUST00000208924	protein_coding	alternative2	7	1	99267972	2906
ENSMUSG00000019874	protein_coding	Fabp7	ENSMUST00000165013	protein_coding		10	1	57784923	880
ENSMUSG00000105425	TEC	Gm43469	ENSMUST00000196084	TEC		3	-1	151096767	4634
ENSMUSG00000070601	protein_coding	Vmn2r84	ENSMUST00000094502	protein_coding	principal2	10	-1	130394332	10516
ENSMUSG00000004056	protein_coding	Akt2	ENSMUST00000167435	protein_coding	principal1	7	1	27591746	2865
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000220983	protein_coding		12	-1	65073900	654
ENSMUSG00000104816	TEC	Gm43473	ENSMUST00000200442	TEC		3	-1	151123918	5997
ENSMUSG00000032555	protein_coding	Topbp1	ENSMUST00000035164	protein_coding	principal1	9	1	103305215	5224
ENSMUSG00000109205	processed_pseudogene	Gm44954	ENSMUST00000208513	processed_pseudogene		7	-1	29764663	227
ENSMUSG00000070601	protein_coding	Vmn2r84	ENSMUST00000232731	nonsense_mediated_decay		10	-1	130394332	10295
ENSMUSG00000062981	protein_coding	Mrpl42	ENSMUST00000219019	nonsense_mediated_decay		10	-1	95500523	677
ENSMUSG00000070601	protein_coding	Vmn2r84	ENSMUST00000233146	protein_coding	alternative2	10	-1	130394332	10345
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000221913	nonsense_mediated_decay		12	-1	65073921	600
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000172403	protein_coding	principal3	15	-1	79328253	2943
ENSMUSG00000070601	protein_coding	Vmn2r84	ENSMUST00000233031	retained_intron		10	-1	130394332	11667
ENSMUSG00000055407	protein_coding	Map6	ENSMUST00000208605	protein_coding	alternative2	7	1	99268406	2275
ENSMUSG00000039097	protein_coding	Rln1	ENSMUST00000182039	retained_intron		19	-1	29334552	3383
ENSMUSG00000032555	protein_coding	Topbp1	ENSMUST00000189631	retained_intron		9	1	103305231	769
ENSMUSG00000079966	processed_pseudogene	Gm14058	ENSMUST00000116082	processed_pseudogene		2	-1	122215354	735
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000220730	protein_coding		12	-1	65073929	579
ENSMUSG00000032555	protein_coding	Topbp1	ENSMUST00000187065	protein_coding		9	1	103305503	536
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000229011	retained_intron		15	-1	79288237	696
ENSMUSG00000055407	protein_coding	Map6	ENSMUST00000209094	processed_transcript		7	1	99269132	677
ENSMUSG00000106157	lincRNA	4930555A03Rik	ENSMUST00000196524	lincRNA		3	1	151294126	921
ENSMUSG00000070692	processed_pseudogene	Rps12-ps10	ENSMUST00000117447	processed_pseudogene		2	1	122219993	399
ENSMUSG00000032555	protein_coding	Topbp1	ENSMUST00000186897	retained_intron		9	1	103327810	4023
ENSMUSG00000055407	protein_coding	Map6	ENSMUST00000068973	protein_coding	principal3	7	1	99267447	3430
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000221710	retained_intron		12	-1	65073962	1233
ENSMUSG00000032555	protein_coding	Topbp1	ENSMUST00000188840	retained_intron		9	1	103327836	1806
ENSMUSG00000104159	TEC	Gm38099	ENSMUST00000193280	TEC		17	-1	31535460	3170
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000174375	retained_intron		15	-1	79304492	863
ENSMUSG00000034254	protein_coding	Agpat1	ENSMUST00000173973	nonsense_mediated_decay		17	1	34605861	1105
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000222467	retained_intron		12	-1	65073914	511
ENSMUSG00000031162	protein_coding	Gata1	ENSMUST00000033502	protein_coding	principal1	X	-1	7967910	1902
ENSMUSG00000031608	protein_coding	Galnt7	ENSMUST00000034021	protein_coding	principal3	8	-1	57653031	4313
ENSMUSG00000032555	protein_coding	Topbp1	ENSMUST00000185721	protein_coding		9	1	103332729	771
ENSMUSG00000117818	lincRNA	Gm50105	ENSMUST00000235158	lincRNA		17	-1	31552257	2711
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000173412	retained_intron		15	-1	79305715	772
ENSMUSG00000020949	protein_coding	Fkbp3	ENSMUST00000221706	retained_intron		12	-1	65073966	408
ENSMUSG00000106157	lincRNA	4930555A03Rik	ENSMUST00000196052	lincRNA		3	1	151294162	1556
ENSMUSG00000055407	protein_coding	Map6	ENSMUST00000107100	protein_coding	alternative2	7	1	99268346	2335
ENSMUSG00000047866	protein_coding	Lonp2	ENSMUST00000034141	protein_coding	principal1	8	1	86624043	2860
ENSMUSG00000032555	protein_coding	Topbp1	ENSMUST00000185305	nonsense_mediated_decay		9	1	103343634	357
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000173601	retained_intron		15	-1	79308797	550
ENSMUSG00000044454	protein_coding	Olfr867	ENSMUST00000216538	protein_coding	principal1	9	-1	20057562	4617
ENSMUSG00000106157	lincRNA	4930555A03Rik	ENSMUST00000197810	lincRNA		3	1	151294163	846
ENSMUSG00000029455	protein_coding	Aldh2	ENSMUST00000031411	protein_coding	principal1	5	-1	121593824	3867
ENSMUSG00000032555	protein_coding	Topbp1	ENSMUST00000190712	retained_intron		9	1	103343936	1157
ENSMUSG00000031162	protein_coding	Gata1	ENSMUST00000125418	protein_coding		X	-1	7978071	676
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000173632	protein_coding		15	-1	79328390	834
ENSMUSG00000105641	processed_pseudogene	Gm5853	ENSMUST00000197183	processed_pseudogene		3	-1	98580398	632
ENSMUSG00000106157	lincRNA	4930555A03Rik	ENSMUST00000196589	lincRNA		3	1	151295003	556
ENSMUSG00000044454	protein_coding	Olfr867	ENSMUST00000212098	protein_coding		9	-1	20057562	4228
ENSMUSG00000005501	protein_coding	Usp40	ENSMUST00000040783	protein_coding	principal3	1	-1	88008551	5049
ENSMUSG00000047866	protein_coding	Lonp2	ENSMUST00000155433	nonsense_mediated_decay		8	1	86624043	4487
ENSMUSG00000106107	sense_intronic	Gm43190	ENSMUST00000187850	sense_intronic		3	-1	98448976	1779
ENSMUSG00000031162	protein_coding	Gata1	ENSMUST00000128449	protein_coding		X	-1	7964166	421
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000174089	retained_intron		15	-1	79318012	708
ENSMUSG00000039097	protein_coding	Rln1	ENSMUST00000044143	protein_coding	principal1	19	-1	29334670	745
ENSMUSG00000044454	protein_coding	Olfr867	ENSMUST00000060780	protein_coding	principal1	9	-1	20055461	996
ENSMUSG00000062981	protein_coding	Mrpl42	ENSMUST00000075829	protein_coding	principal1	10	-1	95501927	666
ENSMUSG00000032555	protein_coding	Topbp1	ENSMUST00000189349	retained_intron		9	1	103345607	525
ENSMUSG00000047866	protein_coding	Lonp2	ENSMUST00000155501	processed_transcript		8	1	86624087	525
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000173109	protein_coding		15	-1	79323566	930
ENSMUSG00000084006	processed_pseudogene	Gm14245	ENSMUST00000118939	processed_pseudogene		2	1	127688405	1843
ENSMUSG00000032555	protein_coding	Topbp1	ENSMUST00000185972	retained_intron		9	1	103346228	828
ENSMUSG00000031608	protein_coding	Galnt7	ENSMUST00000110316	protein_coding	alternative1	8	-1	57653003	3413
ENSMUSG00000024993	protein_coding	Fam45a	ENSMUST00000119633	protein_coding		19	1	60811591	2267
ENSMUSG00000029455	protein_coding	Aldh2	ENSMUST00000196694	retained_intron		5	-1	121571187	845
ENSMUSG00000042632	protein_coding	Pla2g6	ENSMUST00000172936	protein_coding		15	-1	79324488	377
ENSMUSG00000029455	protein_coding	Aldh2	ENSMUST00000199369	protein_coding		5	-1	121579666	802
ENSMUSG00000062981	protein_coding	Mrpl42	ENSMUST00000218893	protein_coding	principal1	10	-1	95501940	661
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000140398	retained_intron		11	1	87578412	900
ENSMUSG00000024993	protein_coding	Fam45a	ENSMUST00000147049	retained_intron		19	1	60811596	3906
ENSMUSG00000092494	antisense	Gm20420	ENSMUST00000173178	antisense		15	1	79314196	1742
ENSMUSG00000029455	protein_coding	Aldh2	ENSMUST00000200541	protein_coding		5	-1	121572838	623
ENSMUSG00000062981	protein_coding	Mrpl42	ENSMUST00000217777	protein_coding		10	-1	95501927	455
ENSMUSG00000047866	protein_coding	Lonp2	ENSMUST00000122188	protein_coding		8	1	86624105	2372
ENSMUSG00000095143	protein_coding	Hsd3b4	ENSMUST00000179429	protein_coding	principal1	3	-1	98510035	1575
ENSMUSG00000087162	antisense	Gm14244	ENSMUST00000155688	antisense		2	1	127691899	2410
ENSMUSG00000031608	protein_coding	Galnt7	ENSMUST00000139417	processed_transcript		8	-1	57538453	897
ENSMUSG00000078127	protein_coding	Fam170b	ENSMUST00000104926	protein_coding	principal1	14	1	32833962	1694
ENSMUSG00000029455	protein_coding	Aldh2	ENSMUST00000129753	protein_coding		5	-1	121593580	1799
ENSMUSG00000005501	protein_coding	Usp40	ENSMUST00000187758	protein_coding	alternative2	1	-1	88008534	3977
ENSMUSG00000062981	protein_coding	Mrpl42	ENSMUST00000218996	retained_intron		10	-1	95501939	3277
ENSMUSG00000081778	unprocessed_pseudogene	Gm6325	ENSMUST00000122015	unprocessed_pseudogene		X	-1	106384071	3114
ENSMUSG00000047866	protein_coding	Lonp2	ENSMUST00000124911	processed_transcript		8	1	86631397	864
ENSMUSG00000003226	protein_coding	Ranbp2	ENSMUST00000219332	retained_intron		10	1	58446920	2609
ENSMUSG00000095143	protein_coding	Hsd3b4	ENSMUST00000196861	protein_coding	principal1	3	-1	98510514	1610
ENSMUSG00000078127	protein_coding	Fam170b	ENSMUST00000227787	retained_intron		14	1	32834321	2466
ENSMUSG00000051606	processed_transcript	2010001K21Rik	ENSMUST00000224305	retained_intron		13	1	46979908	1424
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000122067	protein_coding		11	1	87578424	1303
ENSMUSG00000106129	unprocessed_pseudogene	Gm19210	ENSMUST00000199562	unprocessed_pseudogene		3	-1	98473218	1350
ENSMUSG00000059408	protein_coding	Mrgprh	ENSMUST00000075296	protein_coding	principal1	17	1	12876034	1944
ENSMUSG00000029455	protein_coding	Aldh2	ENSMUST00000133033	retained_intron		5	-1	121575127	1035
ENSMUSG00000031608	protein_coding	Galnt7	ENSMUST00000156907	retained_intron		8	-1	57653032	2042
ENSMUSG00000013562	lincRNA	4833413E03Rik	ENSMUST00000162059	lincRNA		17	1	31557126	1092
ENSMUSG00000109852	TEC	Gm45360	ENSMUST00000210698	TEC		8	-1	57627487	1405
ENSMUSG00000029455	protein_coding	Aldh2	ENSMUST00000152945	protein_coding		5	-1	121593582	656
ENSMUSG00000051606	processed_transcript	2010001K21Rik	ENSMUST00000224451	lincRNA		13	1	46979908	3192
ENSMUSG00000110289	TEC	4930412F12Rik	ENSMUST00000211700	TEC		8	-1	57652359	1471
ENSMUSG00000045822	protein_coding	Zswim3	ENSMUST00000052107	protein_coding	principal1	2	1	164805098	2708
ENSMUSG00000034254	protein_coding	Agpat1	ENSMUST00000037489	protein_coding	principal1	17	1	34605861	2190
ENSMUSG00000110405	TEC	Gm45534	ENSMUST00000211449	TEC		8	-1	57607156	2339
ENSMUSG00000107899	TEC	Gm44069	ENSMUST00000204898	TEC		6	-1	136848249	506
ENSMUSG00000051606	processed_transcript	2010001K21Rik	ENSMUST00000224739	retained_intron		13	1	47008324	323
ENSMUSG00000051606	processed_transcript	2010001K21Rik	ENSMUST00000060680	pseudogene		13	1	47010673	519
ENSMUSG00000109585	TEC	Gm45358	ENSMUST00000209492	TEC		8	-1	57643822	2305
ENSMUSG00000038092	protein_coding	Hsd3b5	ENSMUST00000044094	protein_coding	principal1	3	-1	98630252	1549
ENSMUSG00000110238	TEC	Gm19269	ENSMUST00000211401	TEC		8	-1	57640133	804
ENSMUSG00000114858	processed_pseudogene	Gm5790	ENSMUST00000225443	processed_pseudogene		13	-1	47010945	1413
ENSMUSG00000070025	processed_pseudogene	Gm10284	ENSMUST00000145057	processed_pseudogene		8	1	57550299	1005
ENSMUSG00000013562	lincRNA	4833413E03Rik	ENSMUST00000160270	lincRNA		17	1	31558192	707
ENSMUSG00000038290	protein_coding	Smg6	ENSMUST00000045281	protein_coding	principal1	11	1	74925823	5848
ENSMUSG00000026134	protein_coding	Prim2	ENSMUST00000027312	protein_coding	principal1	1	-1	33669795	1975
ENSMUSG00000034254	protein_coding	Agpat1	ENSMUST00000174228	nonsense_mediated_decay		17	1	34605973	1432
ENSMUSG00000013562	lincRNA	4833413E03Rik	ENSMUST00000013706	lincRNA		17	1	31557126	1091
ENSMUSG00000024993	protein_coding	Fam45a	ENSMUST00000148577	nonsense_mediated_decay		19	1	60811611	521
ENSMUSG00000031486	protein_coding	Adgra2	ENSMUST00000178514	protein_coding		8	1	27085583	5129
ENSMUSG00000047866	protein_coding	Lonp2	ENSMUST00000121673	protein_coding		8	1	86651569	1550
ENSMUSG00000034254	protein_coding	Agpat1	ENSMUST00000114140	protein_coding	principal1	17	1	34609014	1941
ENSMUSG00000044231	protein_coding	Nhlrc1	ENSMUST00000052747	protein_coding	principal1	13	-1	47014850	2294
ENSMUSG00000038290	protein_coding	Smg6	ENSMUST00000135522	retained_intron		11	1	74989361	2200
ENSMUSG00000047866	protein_coding	Lonp2	ENSMUST00000163987	protein_coding		8	1	86651569	1556
ENSMUSG00000071158	protein_coding	Klrh1	ENSMUST00000118532	protein_coding		6	-1	129784270	2000
ENSMUSG00000026134	protein_coding	Prim2	ENSMUST00000189552	retained_intron		1	-1	33622142	2132
ENSMUSG00000034254	protein_coding	Agpat1	ENSMUST00000174595	protein_coding	principal1	17	1	34609605	1911
ENSMUSG00000026663	protein_coding	Atf6	ENSMUST00000027974	protein_coding	principal1	1	-1	170867771	7246
ENSMUSG00000026134	protein_coding	Prim2	ENSMUST00000187353	retained_intron		1	-1	33623324	2447
ENSMUSG00000108744	processed_pseudogene	Gm9367	ENSMUST00000205703	processed_pseudogene		7	1	55462069	546
ENSMUSG00000108780	TEC	5430434F05Rik	ENSMUST00000206080	TEC		6	-1	83420992	3553
ENSMUSG00000113790	processed_pseudogene	Gm17872	ENSMUST00000222550	processed_pseudogene		13	-1	69655512	532
ENSMUSG00000034254	protein_coding	Agpat1	ENSMUST00000173146	retained_intron		17	1	34610260	691
ENSMUSG00000071158	protein_coding	Klrh1	ENSMUST00000095409	protein_coding	principal1	6	-1	129775849	682
ENSMUSG00000112658	processed_pseudogene	Gm47395	ENSMUST00000218908	processed_pseudogene		12	1	96292422	793
ENSMUSG00000026663	protein_coding	Atf6	ENSMUST00000182787	retained_intron		1	-1	170794371	2085
ENSMUSG00000112040	lincRNA	Gm47396	ENSMUST00000218365	lincRNA		12	1	96662314	233
ENSMUSG00000024993	protein_coding	Fam45a	ENSMUST00000025957	protein_coding	principal1	19	1	60811611	2307
ENSMUSG00000089639	processed_pseudogene	Gm2862	ENSMUST00000161524	processed_pseudogene		15	1	25681798	328
ENSMUSG00000005501	protein_coding	Usp40	ENSMUST00000188332	nonsense_mediated_decay		1	-1	88008534	4109
ENSMUSG00000038290	protein_coding	Smg6	ENSMUST00000130145	nonsense_mediated_decay		11	1	74930520	4078
ENSMUSG00000090817	protein_coding	Gm4450	ENSMUST00000167753	protein_coding	principal1	3	-1	98457126	1674
ENSMUSG00000017764	protein_coding	Zswim1	ENSMUST00000017908	protein_coding	principal1	2	1	164822686	2705
ENSMUSG00000043483	processed_pseudogene	Gm6863	ENSMUST00000052882	processed_pseudogene		12	-1	96923058	636
ENSMUSG00000115252	TEC	Gm48996	ENSMUST00000228949	TEC		15	1	25634627	3617
ENSMUSG00000038290	protein_coding	Smg6	ENSMUST00000140197	protein_coding		11	1	74993853	714
ENSMUSG00000051844	processed_transcript	B230319C09Rik	ENSMUST00000063376	antisense		6	1	83441755	1689
ENSMUSG00000030217	protein_coding	Art4	ENSMUST00000032341	protein_coding	principal1	6	-1	136857733	2517
ENSMUSG00000030148	protein_coding	Clec4a2	ENSMUST00000161365	protein_coding	principal3	6	1	123122690	918
ENSMUSG00000005501	protein_coding	Usp40	ENSMUST00000186670	retained_intron		1	-1	87951673	571
ENSMUSG00000113635	processed_pseudogene	Gm48816	ENSMUST00000220583	processed_pseudogene		13	1	69662055	366
ENSMUSG00000005501	protein_coding	Usp40	ENSMUST00000190446	retained_intron		1	-1	87967195	2179
ENSMUSG00000096825	TR_V_gene	Trav12-1	ENSMUST00000200115	TR_V_gene	principal5	14	1	53538191	416
ENSMUSG00000090817	protein_coding	Gm4450	ENSMUST00000188356	protein_coding		3	-1	98457043	778
ENSMUSG00000024993	protein_coding	Fam45a	ENSMUST00000136146	processed_transcript		19	1	60812040	273
ENSMUSG00000038290	protein_coding	Smg6	ENSMUST00000142038	processed_transcript		11	1	75132435	487
ENSMUSG00000015467	protein_coding	Egfl8	ENSMUST00000170850	retained_intron		17	-1	34615320	1478
ENSMUSG00000096825	TR_V_gene	Trav12-1	ENSMUST00000103650	TR_V_gene	alternative2	14	1	53538260	344
ENSMUSG00000005501	protein_coding	Usp40	ENSMUST00000186315	retained_intron		1	-1	88008528	1725
ENSMUSG00000017764	protein_coding	Zswim1	ENSMUST00000132282	protein_coding		2	1	164823013	851
ENSMUSG00000051844	processed_transcript	B230319C09Rik	ENSMUST00000170986	processed_transcript		6	1	83441810	915
ENSMUSG00000005501	protein_coding	Usp40	ENSMUST00000187871	retained_intron		1	-1	88008229	2335
ENSMUSG00000051844	processed_transcript	B230319C09Rik	ENSMUST00000167886	processed_transcript		6	1	83441812	348
ENSMUSG00000038290	protein_coding	Smg6	ENSMUST00000153226	processed_transcript		11	1	75159633	637
ENSMUSG00000005501	protein_coding	Usp40	ENSMUST00000189586	retained_intron		1	-1	88008550	1661
ENSMUSG00000105696	unprocessed_pseudogene	Gm19211	ENSMUST00000200251	unprocessed_pseudogene		3	-1	98526690	1206
ENSMUSG00000024993	protein_coding	Fam45a	ENSMUST00000142375	retained_intron		19	1	60830552	726
ENSMUSG00000029993	protein_coding	Nfu1	ENSMUST00000120240	protein_coding	principal3	6	1	87009236	1195
ENSMUSG00000017767	protein_coding	Spata25	ENSMUST00000141411	processed_transcript		2	-1	164828528	476
ENSMUSG00000030148	protein_coding	Clec4a2	ENSMUST00000041779	protein_coding	principal3	6	1	123123316	2481
ENSMUSG00000001323	protein_coding	Srr	ENSMUST00000127499	processed_transcript		11	-1	74925675	2832
ENSMUSG00000101942	antisense	Gm19582	ENSMUST00000187511	antisense		1	-1	87854299	841
ENSMUSG00000103996	TEC	4833421G17Rik	ENSMUST00000191704	TEC		1	1	87865073	844
ENSMUSG00000029993	protein_coding	Nfu1	ENSMUST00000203512	retained_intron		6	1	87009836	371
ENSMUSG00000103591	TEC	Gm38365	ENSMUST00000195720	TEC		1	1	87897540	2993
ENSMUSG00000027935	protein_coding	Rab13	ENSMUST00000107373	protein_coding		3	1	90213695	1415
ENSMUSG00000083331	unprocessed_pseudogene	Gm12400	ENSMUST00000120915	unprocessed_pseudogene		3	-1	98688182	1003
ENSMUSG00000027935	protein_coding	Rab13	ENSMUST00000198809	retained_intron		3	1	90213710	762
ENSMUSG00000031486	protein_coding	Adgra2	ENSMUST00000033876	protein_coding	principal1	8	1	27085598	5760
ENSMUSG00000118071	antisense	Gm50455	ENSMUST00000235397	antisense		17	-1	31565692	2911
ENSMUSG00000063253	protein_coding	Scoc	ENSMUST00000212473	processed_transcript		8	-1	83442501	673
ENSMUSG00000062410	protein_coding	Hsd3b3	ENSMUST00000107018	protein_coding		3	-1	98763127	1443
ENSMUSG00000031486	protein_coding	Adgra2	ENSMUST00000179207	nonsense_mediated_decay		8	1	27114133	971
ENSMUSG00000035020	protein_coding	Epgn	ENSMUST00000202724	protein_coding	alternative2	5	1	91027464	805
ENSMUSG00000030148	protein_coding	Clec4a2	ENSMUST00000032248	protein_coding	alternative2	6	1	123123467	1261
ENSMUSG00000017767	protein_coding	Spata25	ENSMUST00000017911	protein_coding	principal1	2	-1	164828537	786
ENSMUSG00000062410	protein_coding	Hsd3b3	ENSMUST00000107019	protein_coding	principal1	3	-1	98763053	1533
ENSMUSG00000039253	protein_coding	Fn3krp	ENSMUST00000038096	protein_coding	principal1	11	1	121421401	2520
ENSMUSG00000062410	protein_coding	Hsd3b3	ENSMUST00000146196	protein_coding		3	-1	98762404	735
ENSMUSG00000029993	protein_coding	Nfu1	ENSMUST00000117583	protein_coding	alternative2	6	1	87009836	950
ENSMUSG00000027935	protein_coding	Rab13	ENSMUST00000065418	protein_coding	principal1	3	1	90220787	1107
ENSMUSG00000031486	protein_coding	Adgra2	ENSMUST00000179351	protein_coding		8	1	27117369	1149
ENSMUSG00000046185	protein_coding	Zfp84	ENSMUST00000032802	protein_coding	principal1	7	1	29768552	4113
ENSMUSG00000062410	protein_coding	Hsd3b3	ENSMUST00000125483	processed_transcript		3	-1	98763092	4766
ENSMUSG00000029993	protein_coding	Nfu1	ENSMUST00000205018	retained_intron		6	1	87009880	2508
ENSMUSG00000076839	TR_V_gene	Trav13-1	ENSMUST00000103651	TR_V_gene	principal1	14	1	53545014	331
ENSMUSG00000026107	protein_coding	Nabp1	ENSMUST00000189542	nonsense_mediated_decay		1	-1	51478399	4790
ENSMUSG00000029993	protein_coding	Nfu1	ENSMUST00000140343	retained_intron		6	1	87009889	655
ENSMUSG00000062410	protein_coding	Hsd3b3	ENSMUST00000094050	protein_coding		3	-1	98753465	1327
ENSMUSG00000035020	protein_coding	Epgn	ENSMUST00000041516	protein_coding	principal2	5	1	91027464	1760
ENSMUSG00000026107	protein_coding	Nabp1	ENSMUST00000186003	nonsense_mediated_decay		1	-1	51478067	4418
ENSMUSG00000062410	protein_coding	Hsd3b3	ENSMUST00000090743	protein_coding	principal1	3	-1	98753465	1492
ENSMUSG00000029993	protein_coding	Nfu1	ENSMUST00000144776	protein_coding		6	1	87009889	777
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000132723	retained_intron		11	1	87578447	1884
ENSMUSG00000112635	lincRNA	Gm47397	ENSMUST00000217786	lincRNA		12	-1	97102464	460
ENSMUSG00000076840	TR_V_gene	Trav14-1	ENSMUST00000198297	TR_V_gene	principal1	14	1	53554022	399
ENSMUSG00000114037	processed_pseudogene	Gm48817	ENSMUST00000223402	processed_pseudogene		13	-1	69665833	1061
ENSMUSG00000029993	protein_coding	Nfu1	ENSMUST00000127819	processed_transcript		6	1	87010003	716
ENSMUSG00000112598	lincRNA	Gm40552	ENSMUST00000218233	lincRNA		12	1	97312849	1258
ENSMUSG00000081919	unprocessed_pseudogene	Gm12399	ENSMUST00000121475	unprocessed_pseudogene		3	-1	98678331	446
ENSMUSG00000024501	protein_coding	Dpysl3	ENSMUST00000121805	protein_coding	alternative1	18	-1	43438286	5479
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000123081	retained_intron		11	1	87578456	1474
ENSMUSG00000029993	protein_coding	Nfu1	ENSMUST00000204103	retained_intron		6	1	87024999	829
ENSMUSG00000114171	processed_pseudogene	Gm18313	ENSMUST00000221036	processed_pseudogene		13	-1	69668944	1784
ENSMUSG00000112590	processed_pseudogene	Gm5186	ENSMUST00000218781	processed_pseudogene		12	-1	97565068	920
ENSMUSG00000029993	protein_coding	Nfu1	ENSMUST00000032060	protein_coding	principal3	6	1	87009836	948
ENSMUSG00000112584	processed_pseudogene	Gm2398	ENSMUST00000218347	processed_pseudogene		12	1	97663447	883
ENSMUSG00000117658	lincRNA	Gm50417	ENSMUST00000237771	lincRNA		18	-1	83603057	1551
ENSMUSG00000117658	lincRNA	Gm50417	ENSMUST00000235642	lincRNA		18	-1	83603102	1789
ENSMUSG00000024501	protein_coding	Dpysl3	ENSMUST00000237707	nonsense_mediated_decay		18	-1	43373223	2536
ENSMUSG00000042861	protein_coding	Kcna10	ENSMUST00000055064	protein_coding	principal1	3	1	107183056	1913
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000133638	retained_intron		11	1	87578470	1449
ENSMUSG00000000776	protein_coding	Polr3d	ENSMUST00000000793	protein_coding	principal1	14	-1	70443447	2016
ENSMUSG00000031163	protein_coding	Glod5	ENSMUST00000033503	protein_coding	principal1	X	-1	8018492	673
ENSMUSG00000118222	lincRNA	Gm50418	ENSMUST00000236075	lincRNA		18	1	83624800	270
ENSMUSG00000107350	antisense	Gm19610	ENSMUST00000202894	antisense		5	-1	91074773	408
ENSMUSG00000095388	protein_coding	Gm10681	ENSMUST00000186215	protein_coding	principal1	3	-1	98563506	1575
ENSMUSG00000042861	protein_coding	Kcna10	ENSMUST00000169751	processed_transcript		3	1	107183144	357
ENSMUSG00000034832	protein_coding	Tet3	ENSMUST00000089622	protein_coding		6	-1	83441675	10904
ENSMUSG00000118200	lincRNA	Gm31621	ENSMUST00000237151	lincRNA		18	-1	83637977	1055
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000135175	retained_intron		11	1	87578484	1354
ENSMUSG00000118200	lincRNA	Gm31621	ENSMUST00000236855	lincRNA		18	-1	83637943	1291
ENSMUSG00000118200	lincRNA	Gm31621	ENSMUST00000235715	lincRNA		18	-1	83637987	1737
ENSMUSG00000118200	lincRNA	Gm31621	ENSMUST00000235139	lincRNA		18	-1	83637942	1072
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000107961	protein_coding		11	1	87578928	759
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000102820	protein_coding	alternative2	4	-1	84675034	4133
ENSMUSG00000118200	lincRNA	Gm31621	ENSMUST00000237865	lincRNA		18	-1	83638085	1488
ENSMUSG00000118200	lincRNA	Gm31621	ENSMUST00000237789	lincRNA		18	-1	83637926	1117
ENSMUSG00000000776	protein_coding	Polr3d	ENSMUST00000180358	protein_coding	principal1	14	-1	70443290	2032
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000107198	protein_coding	alternative2	4	-1	84675067	3948
ENSMUSG00000034832	protein_coding	Tet3	ENSMUST00000186548	protein_coding	principal1	6	-1	83456392	5944
ENSMUSG00000118024	lincRNA	Gm50419	ENSMUST00000237374	lincRNA		18	-1	83827606	1067
ENSMUSG00000031487	protein_coding	Brf2	ENSMUST00000033877	protein_coding	principal1	8	-1	27128680	1899
ENSMUSG00000024501	protein_coding	Dpysl3	ENSMUST00000118043	protein_coding		18	-1	43373272	1986
ENSMUSG00000094016	TR_V_gene	Trav15-1-dv6-1	ENSMUST00000200101	TR_V_gene	principal5	14	1	53559632	396
ENSMUSG00000117826	processed_pseudogene	Gm50420	ENSMUST00000235471	processed_pseudogene		18	1	83905796	147
ENSMUSG00000094016	TR_V_gene	Trav15-1-dv6-1	ENSMUST00000103653	TR_V_gene	alternative2	14	1	53559676	349
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000018544	protein_coding	principal3	11	1	87581041	1726
ENSMUSG00000117894	processed_pseudogene	Gm50421	ENSMUST00000238017	processed_pseudogene		18	1	83987995	91
ENSMUSG00000095388	protein_coding	Gm10681	ENSMUST00000058728	protein_coding	principal1	3	-1	98563985	1610
ENSMUSG00000000776	protein_coding	Polr3d	ENSMUST00000226523	retained_intron		14	-1	70439925	426
ENSMUSG00000031487	protein_coding	Brf2	ENSMUST00000211236	protein_coding		8	-1	27125511	478
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176612	protein_coding		4	-1	84675275	3963
ENSMUSG00000104738	TR_V_pseudogene	Trav3-2	ENSMUST00000198999	TR_V_pseudogene		14	1	53586500	305
ENSMUSG00000000776	protein_coding	Polr3d	ENSMUST00000227985	retained_intron		14	-1	70441455	703
ENSMUSG00000034832	protein_coding	Tet3	ENSMUST00000056191	processed_transcript		6	-1	83441678	2523
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176971	protein_coding		4	-1	84291757	1127
ENSMUSG00000034832	protein_coding	Tet3	ENSMUST00000190295	protein_coding		6	-1	83459084	469
ENSMUSG00000009114	protein_coding	2610028H24Rik	ENSMUST00000092406	protein_coding	principal2	10	1	76449081	1640
ENSMUSG00000000776	protein_coding	Polr3d	ENSMUST00000227748	retained_intron		14	-1	70441717	503
ENSMUSG00000034832	protein_coding	Tet3	ENSMUST00000205921	retained_intron		6	-1	83441632	4836
ENSMUSG00000000776	protein_coding	Polr3d	ENSMUST00000226549	retained_intron		14	-1	70443420	352
ENSMUSG00000029377	protein_coding	Ereg	ENSMUST00000031324	protein_coding	principal1	5	1	91074622	4128
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000063156	protein_coding	alternative1	11	1	87581061	1245
ENSMUSG00000095388	protein_coding	Gm10681	ENSMUST00000178221	protein_coding	principal1	3	-1	98588807	1605
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000107960	protein_coding		11	1	87581061	1653
ENSMUSG00000009114	protein_coding	2610028H24Rik	ENSMUST00000105415	protein_coding	alternative2	10	1	76450327	1464
ENSMUSG00000024501	protein_coding	Dpysl3	ENSMUST00000025379	protein_coding	principal3	18	-1	43393377	2106
ENSMUSG00000035121	protein_coding	Neil2	ENSMUST00000038229	protein_coding	principal1	14	-1	63193541	1932
ENSMUSG00000105401	lincRNA	Gm42949	ENSMUST00000197054	lincRNA		3	1	151333349	2202
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000136229	retained_intron		11	1	87581069	1252
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176691	protein_coding	principal2	4	-1	84675086	3385
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000134923	retained_intron		11	1	87581074	2136
ENSMUSG00000106456	unprocessed_pseudogene	Gm9678	ENSMUST00000198979	unprocessed_pseudogene		3	-1	98588290	1149
ENSMUSG00000024501	protein_coding	Dpysl3	ENSMUST00000124207	processed_transcript		18	-1	43345964	778
ENSMUSG00000024501	protein_coding	Dpysl3	ENSMUST00000118071	processed_transcript		18	-1	43345558	391
ENSMUSG00000046982	protein_coding	Tshz1	ENSMUST00000060303	protein_coding	principal1	18	-1	84086404	5656
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000133202	protein_coding		11	1	87582209	878
ENSMUSG00000094966	TR_V_gene	Trav9-2	ENSMUST00000103654	TR_V_gene	principal1	14	1	53590857	563
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000148216	retained_intron		11	1	87585225	560
ENSMUSG00000113299	lincRNA	Gm35618	ENSMUST00000223164	lincRNA		13	-1	69697676	1606
ENSMUSG00000081903	unprocessed_pseudogene	Gm11387	ENSMUST00000120266	unprocessed_pseudogene		13	1	33508127	772
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000177277	protein_coding		4	-1	84291930	561
ENSMUSG00000031487	protein_coding	Brf2	ENSMUST00000210230	processed_transcript		8	-1	27128613	620
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000127414	retained_intron		11	1	87588868	845
ENSMUSG00000112004	processed_pseudogene	Gm8785	ENSMUST00000220259	processed_pseudogene		12	-1	97677541	487
ENSMUSG00000031487	protein_coding	Brf2	ENSMUST00000211151	nonsense_mediated_decay		8	-1	27128623	790
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000143950	processed_transcript		11	1	87589477	535
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000041819	protein_coding	principal2	17	-1	28365222	2091
ENSMUSG00000031487	protein_coding	Brf2	ENSMUST00000210590	retained_intron		8	-1	27127519	794
ENSMUSG00000046982	protein_coding	Tshz1	ENSMUST00000175783	protein_coding		18	-1	84086451	4597
ENSMUSG00000020486	protein_coding	Septin4	ENSMUST00000060360	protein_coding		11	1	87566802	1611
ENSMUSG00000035121	protein_coding	Neil2	ENSMUST00000225157	protein_coding		14	-1	63193525	550
ENSMUSG00000033126	protein_coding	Ybey	ENSMUST00000049185	protein_coding	principal1	10	-1	76469114	4522
ENSMUSG00000031487	protein_coding	Brf2	ENSMUST00000210552	nonsense_mediated_decay		8	-1	27128632	1688
ENSMUSG00000050064	protein_coding	Zfp697	ENSMUST00000196741	processed_transcript		3	1	98382461	955
ENSMUSG00000049764	protein_coding	Zfp280b	ENSMUST00000218627	protein_coding		10	1	76032650	378
ENSMUSG00000035121	protein_coding	Neil2	ENSMUST00000225841	nonsense_mediated_decay		14	-1	63193525	1109
ENSMUSG00000031487	protein_coding	Brf2	ENSMUST00000209770	nonsense_mediated_decay		8	-1	27128654	448
ENSMUSG00000046982	protein_coding	Tshz1	ENSMUST00000235188	processed_transcript		18	-1	84085075	480
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176702	protein_coding		4	-1	84292146	723
ENSMUSG00000093557	lincRNA	4930555M17Rik	ENSMUST00000176666	lincRNA		3	-1	5515333	402
ENSMUSG00000046982	protein_coding	Tshz1	ENSMUST00000237918	processed_transcript		18	-1	84087706	464
ENSMUSG00000035121	protein_coding	Neil2	ENSMUST00000226002	protein_coding		14	-1	63193525	1037
ENSMUSG00000033126	protein_coding	Ybey	ENSMUST00000218564	retained_intron		10	-1	76468863	1499
ENSMUSG00000066487	processed_pseudogene	Gm5786	ENSMUST00000085368	processed_pseudogene		12	1	59081019	882
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176998	protein_coding		4	-1	84291868	276
ENSMUSG00000060566	processed_pseudogene	Rpl21-ps3	ENSMUST00000080223	processed_pseudogene		12	-1	59094537	483
ENSMUSG00000035121	protein_coding	Neil2	ENSMUST00000223723	retained_intron		14	-1	63193856	3580
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176601	protein_coding		4	-1	84291868	280
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000148188	protein_coding		17	-1	28358765	1086
ENSMUSG00000085833	lincRNA	Gm13003	ENSMUST00000151040	lincRNA		4	-1	137165066	2904
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000233921	protein_coding		17	-1	28356174	676
ENSMUSG00000003226	protein_coding	Ranbp2	ENSMUST00000003310	protein_coding	principal1	10	1	58446922	9608
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000175800	protein_coding		4	-1	84674996	1232
ENSMUSG00000100691	lincRNA	2010320M18Rik	ENSMUST00000191396	lincRNA		8	1	70776815	1009
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176418	protein_coding		4	-1	84674996	1236
ENSMUSG00000050064	protein_coding	Zfp697	ENSMUST00000196194	processed_transcript		3	1	98382481	2351
ENSMUSG00000097042	sense_intronic	Gm17491	ENSMUST00000180411	sense_intronic		8	1	22480291	2311
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000233420	protein_coding	alternative2	17	-1	28365143	1851
ENSMUSG00000049764	protein_coding	Zfp280b	ENSMUST00000061617	protein_coding	principal1	10	1	76032654	5097
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000053748	protein_coding	principal2	10	1	25359798	4385
ENSMUSG00000003226	protein_coding	Ranbp2	ENSMUST00000220131	retained_intron		10	1	58447195	1535
ENSMUSG00000112524	lincRNA	Gm35274	ENSMUST00000217709	lincRNA		12	-1	97740244	646
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000129375	nonsense_mediated_decay		17	-1	28358662	533
ENSMUSG00000048425	protein_coding	Olfr686	ENSMUST00000216613	protein_coding	principal1	7	-1	105205155	2613
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000218903	protein_coding	alternative2	10	1	25359856	4115
ENSMUSG00000048425	protein_coding	Olfr686	ENSMUST00000214147	protein_coding	principal1	7	-1	105206930	2646
ENSMUSG00000113324	lincRNA	Gm48819	ENSMUST00000220876	lincRNA		13	1	69697811	1477
ENSMUSG00000048425	protein_coding	Olfr686	ENSMUST00000216143	protein_coding	principal1	7	-1	105207485	2612
ENSMUSG00000026107	protein_coding	Nabp1	ENSMUST00000190103	nonsense_mediated_decay		1	-1	51478399	2903
ENSMUSG00000003469	protein_coding	Phyhip	ENSMUST00000003561	protein_coding	principal1	14	1	70457476	2838
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000219900	protein_coding		10	1	25398659	1766
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000175757	processed_transcript		4	-1	84507739	792
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176947	protein_coding		4	-1	84675027	763
ENSMUSG00000050064	protein_coding	Zfp697	ENSMUST00000056096	protein_coding	principal1	3	1	98382481	5166
ENSMUSG00000040859	protein_coding	Bsdc1	ENSMUST00000048162	protein_coding	principal1	4	1	129461581	2823
ENSMUSG00000112661	unprocessed_pseudogene	Gm6869	ENSMUST00000220334	unprocessed_pseudogene		12	1	97844383	734
ENSMUSG00000048425	protein_coding	Olfr686	ENSMUST00000050157	protein_coding	principal1	7	-1	105204376	1018
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000219967	protein_coding		10	1	25403203	754
ENSMUSG00000111885	lincRNA	Gm35326	ENSMUST00000218234	lincRNA		12	-1	97872520	1041
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000175969	protein_coding		4	-1	84674997	636
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000219805	protein_coding		10	1	25408387	1609
ENSMUSG00000003469	protein_coding	Phyhip	ENSMUST00000159180	protein_coding		14	1	70458523	358
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176476	processed_transcript		4	-1	84533396	541
ENSMUSG00000026107	protein_coding	Nabp1	ENSMUST00000027279	protein_coding	principal1	1	-1	51478399	2838
ENSMUSG00000080806	processed_pseudogene	Gm13005	ENSMUST00000119518	processed_pseudogene		4	-1	137220399	585
ENSMUSG00000049090	protein_coding	Zadh2	ENSMUST00000060223	protein_coding	principal1	18	1	84088063	3430
ENSMUSG00000050064	protein_coding	Zfp697	ENSMUST00000178372	protein_coding	principal1	3	1	98382548	4703
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000219224	protein_coding		10	1	25432599	563
ENSMUSG00000049090	protein_coding	Zadh2	ENSMUST00000235383	protein_coding		18	1	84088671	1789
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000140250	retained_intron		17	-1	28362920	2179
ENSMUSG00000082149	processed_pseudogene	Gm13002	ENSMUST00000119286	processed_pseudogene		4	-1	137223322	682
ENSMUSG00000026107	protein_coding	Nabp1	ENSMUST00000186684	protein_coding		1	-1	51478399	2677
ENSMUSG00000073908	transcribed_unprocessed_pseudogene	Olfr687	ENSMUST00000218046	processed_transcript		7	1	105272852	1004
ENSMUSG00000073908	transcribed_unprocessed_pseudogene	Olfr687	ENSMUST00000098154	transcribed_unprocessed_pseudogene		7	1	105275494	938
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000142143	retained_intron		17	-1	28356808	1962
ENSMUSG00000026107	protein_coding	Nabp1	ENSMUST00000188204	protein_coding		1	-1	51478399	972
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000219166	protein_coding		10	1	25432616	623
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000123276	retained_intron		4	-1	84674999	2986
ENSMUSG00000118225	lincRNA	Gm31854	ENSMUST00000235867	lincRNA		18	-1	84102266	383
ENSMUSG00000040859	protein_coding	Bsdc1	ENSMUST00000149587	processed_transcript		4	1	129461672	289
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176346	nonsense_mediated_decay		4	-1	84674997	692
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000123797	protein_coding		17	-1	28359229	1197
ENSMUSG00000026107	protein_coding	Nabp1	ENSMUST00000188051	protein_coding		1	-1	51478425	680
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000177256	processed_transcript		4	-1	84546619	545
ENSMUSG00000063253	protein_coding	Scoc	ENSMUST00000212449	protein_coding		8	-1	83442450	280
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000217929	protein_coding		10	1	25441573	3621
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000114794	protein_coding		17	-1	28365182	1738
ENSMUSG00000117915	lincRNA	Gm50309	ENSMUST00000238103	lincRNA		18	-1	84111908	510
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000175756	protein_coding		4	-1	84675078	364
ENSMUSG00000040859	protein_coding	Bsdc1	ENSMUST00000154368	processed_transcript		4	1	129461684	451
ENSMUSG00000015467	protein_coding	Egfl8	ENSMUST00000097345	protein_coding	alternative2	17	-1	34615971	1064
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000177040	protein_coding		4	-1	84546290	626
ENSMUSG00000063730	protein_coding	Hsd3b2	ENSMUST00000107022	protein_coding	principal1	3	-1	98724543	3695
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000220121	protein_coding		10	1	25441611	3358
ENSMUSG00000005142	protein_coding	Man2b1	ENSMUST00000210991	retained_intron		8	1	85083270	2820
ENSMUSG00000026107	protein_coding	Nabp1	ENSMUST00000185534	protein_coding		1	-1	51478399	708
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000131604	nonsense_mediated_decay		17	-1	28362432	578
ENSMUSG00000040859	protein_coding	Bsdc1	ENSMUST00000131741	retained_intron		4	1	129461684	3025
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176264	processed_transcript		4	-1	84523693	845
ENSMUSG00000028487	protein_coding	Bnc2	ENSMUST00000176370	protein_coding		4	-1	84674999	566
ENSMUSG00000063730	protein_coding	Hsd3b2	ENSMUST00000107021	protein_coding	principal1	3	-1	98724531	1788
ENSMUSG00000040859	protein_coding	Bsdc1	ENSMUST00000133083	retained_intron		4	1	129461687	814
ENSMUSG00000018733	protein_coding	Pex12	ENSMUST00000018877	protein_coding	principal1	11	-1	83298977	2729
ENSMUSG00000063730	protein_coding	Hsd3b2	ENSMUST00000177651	protein_coding	principal1	3	-1	98716560	1122
ENSMUSG00000026107	protein_coding	Nabp1	ENSMUST00000185961	retained_intron		1	-1	51473396	516
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000125876	retained_intron		17	-1	28362957	1227
ENSMUSG00000058807	protein_coding	Olfr331	ENSMUST00000081743	protein_coding	principal1	11	-1	58502572	975
ENSMUSG00000031534	protein_coding	Smim19	ENSMUST00000163774	protein_coding		8	-1	22476855	1435
ENSMUSG00000026107	protein_coding	Nabp1	ENSMUST00000188303	retained_intron		1	-1	51478399	2808
ENSMUSG00000040859	protein_coding	Bsdc1	ENSMUST00000138013	protein_coding		4	1	129461836	452
ENSMUSG00000058807	protein_coding	Olfr331	ENSMUST00000170501	protein_coding		11	-1	58502554	957
ENSMUSG00000005142	protein_coding	Man2b1	ENSMUST00000209361	nonsense_mediated_decay		8	1	85083304	793
ENSMUSG00000040859	protein_coding	Bsdc1	ENSMUST00000153591	processed_transcript		4	1	129464542	358
ENSMUSG00000021185	protein_coding	Dglucy	ENSMUST00000069782	protein_coding	principal2	12	1	100779057	3295
ENSMUSG00000024325	protein_coding	Ring1	ENSMUST00000025183	protein_coding	principal1	17	-1	34024680	2034
ENSMUSG00000040859	protein_coding	Bsdc1	ENSMUST00000145168	retained_intron		4	1	129471873	456
ENSMUSG00000005142	protein_coding	Man2b1	ENSMUST00000209264	nonsense_mediated_decay		8	1	85083309	912
ENSMUSG00000102817	transcribed_unprocessed_pseudogene	Gm6185	ENSMUST00000193379	transcribed_unprocessed_pseudogene		1	1	161176936	3553
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000146493	retained_intron		17	-1	28365139	946
ENSMUSG00000025950	protein_coding	Idh1	ENSMUST00000097709	protein_coding	principal1	1	-1	65179181	2302
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000219138	processed_transcript		10	1	25466973	1489
ENSMUSG00000037353	protein_coding	Letmd1	ENSMUST00000037001	protein_coding	principal2	15	1	100469023	2502
ENSMUSG00000102817	transcribed_unprocessed_pseudogene	Gm6185	ENSMUST00000212885	processed_transcript		1	1	161200809	2692
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000219390	retained_intron		10	1	25484281	596
ENSMUSG00000037446	protein_coding	Tulp1	ENSMUST00000150341	retained_intron		17	-1	28365146	861
ENSMUSG00000024325	protein_coding	Ring1	ENSMUST00000174054	retained_intron		17	-1	34023932	2552
ENSMUSG00000063253	protein_coding	Scoc	ENSMUST00000081506	protein_coding	principal3	8	-1	83458349	1791
ENSMUSG00000021185	protein_coding	Dglucy	ENSMUST00000110073	protein_coding	alternative2	12	1	100779078	3184
ENSMUSG00000024325	protein_coding	Ring1	ENSMUST00000172739	retained_intron		17	-1	34024652	371
ENSMUSG00000025950	protein_coding	Idh1	ENSMUST00000188109	protein_coding		1	-1	65186438	756
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000220290	protein_coding		10	1	25490784	4345
ENSMUSG00000037353	protein_coding	Letmd1	ENSMUST00000230294	protein_coding		15	1	100469035	2266
ENSMUSG00000114610	unprocessed_pseudogene	Cyp2c52-ps	ENSMUST00000225458	unprocessed_pseudogene		19	1	38976647	1454
ENSMUSG00000018733	protein_coding	Pex12	ENSMUST00000175741	protein_coding	principal1	11	-1	83298895	2337
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000220335	retained_intron		10	1	25494623	2402
ENSMUSG00000015467	protein_coding	Egfl8	ENSMUST00000015611	protein_coding	principal2	17	-1	34615971	1150
ENSMUSG00000048080	protein_coding	Olfr731	ENSMUST00000214388	protein_coding	principal1	14	-1	50241704	5438
ENSMUSG00000037353	protein_coding	Letmd1	ENSMUST00000230339	retained_intron		15	1	100469060	630
ENSMUSG00000078349	processed_transcript	AW011738	ENSMUST00000238370	lincRNA		4	1	156203270	2876
ENSMUSG00000063253	protein_coding	Scoc	ENSMUST00000167525	protein_coding	alternative2	8	-1	83442507	1764
ENSMUSG00000085342	processed_pseudogene	Gm12254	ENSMUST00000134617	processed_pseudogene		11	-1	58509261	471
ENSMUSG00000031534	protein_coding	Smim19	ENSMUST00000033935	protein_coding	principal1	8	-1	22476882	1402
ENSMUSG00000063430	protein_coding	Wscd2	ENSMUST00000138757	retained_intron		5	1	113490333	2809
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000217943	protein_coding		10	1	25495481	612
ENSMUSG00000048080	protein_coding	Olfr731	ENSMUST00000214152	protein_coding	principal1	14	-1	50241866	5572
ENSMUSG00000078349	processed_transcript	AW011738	ENSMUST00000238578	retained_intron		4	1	156203284	2745
ENSMUSG00000063253	protein_coding	Scoc	ENSMUST00000212905	protein_coding	alternative2	8	-1	83438246	798
ENSMUSG00000018900	protein_coding	Slc22a5	ENSMUST00000019044	protein_coding	principal1	11	-1	53891660	3062
ENSMUSG00000048080	protein_coding	Olfr731	ENSMUST00000213322	processed_transcript		14	-1	50241861	5358
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000217844	processed_transcript		10	1	25495481	518
ENSMUSG00000037353	protein_coding	Letmd1	ENSMUST00000229648	protein_coding	alternative2	15	1	100469107	1222
ENSMUSG00000021185	protein_coding	Dglucy	ENSMUST00000110070	nonsense_mediated_decay		12	1	100779086	2424
ENSMUSG00000015467	protein_coding	Egfl8	ENSMUST00000168353	protein_coding		17	-1	34615788	985
ENSMUSG00000025950	protein_coding	Idh1	ENSMUST00000188876	protein_coding		1	-1	65186500	844
ENSMUSG00000048080	protein_coding	Olfr731	ENSMUST00000059565	protein_coding	principal1	14	-1	50238883	981
ENSMUSG00000078349	processed_transcript	AW011738	ENSMUST00000105140	processed_transcript		4	1	156203304	1848
ENSMUSG00000018733	protein_coding	Pex12	ENSMUST00000108146	protein_coding	principal1	11	-1	83298942	2389
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000219941	retained_intron		10	1	25499759	803
ENSMUSG00000025950	protein_coding	Idh1	ENSMUST00000149310	protein_coding		1	-1	65175564	499
ENSMUSG00000063253	protein_coding	Scoc	ENSMUST00000212947	retained_intron		8	-1	83437827	597
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000171751	protein_coding	principal4	15	-1	77306928	6907
ENSMUSG00000049517	protein_coding	Rps23	ENSMUST00000051955	protein_coding	principal1	13	1	90922958	937
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000218345	retained_intron		10	1	25501991	722
ENSMUSG00000021185	protein_coding	Dglucy	ENSMUST00000110069	protein_coding	principal2	12	1	100779095	3058
ENSMUSG00000018733	protein_coding	Pex12	ENSMUST00000176518	protein_coding	principal1	11	-1	83298897	2501
ENSMUSG00000018900	protein_coding	Slc22a5	ENSMUST00000152084	nonsense_mediated_decay		11	-1	53871677	861
ENSMUSG00000085348	antisense	Myhas	ENSMUST00000145021	antisense		11	-1	67237573	950
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000219372	protein_coding		10	1	25502281	523
ENSMUSG00000021185	protein_coding	Dglucy	ENSMUST00000154603	nonsense_mediated_decay		12	1	100779136	514
ENSMUSG00000015467	protein_coding	Egfl8	ENSMUST00000166095	retained_intron		17	-1	34615956	854
ENSMUSG00000085348	antisense	Myhas	ENSMUST00000137662	antisense		11	-1	67228742	787
ENSMUSG00000018733	protein_coding	Pex12	ENSMUST00000153487	processed_transcript		11	-1	83298938	641
ENSMUSG00000025950	protein_coding	Idh1	ENSMUST00000186222	protein_coding		1	-1	65186459	573
ENSMUSG00000018900	protein_coding	Slc22a5	ENSMUST00000136307	nonsense_mediated_decay		11	-1	53891595	737
ENSMUSG00000037353	protein_coding	Letmd1	ENSMUST00000229012	nonsense_mediated_decay		15	1	100469115	2389
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000219201	retained_intron		10	1	25505594	1126
ENSMUSG00000015467	protein_coding	Egfl8	ENSMUST00000168327	retained_intron		17	-1	34615321	388
ENSMUSG00000085348	antisense	Myhas	ENSMUST00000149070	antisense		11	-1	67237281	883
ENSMUSG00000018733	protein_coding	Pex12	ENSMUST00000176374	protein_coding		11	-1	83302586	671
ENSMUSG00000049517	protein_coding	Rps23	ENSMUST00000224463	processed_transcript		13	1	90923217	658
ENSMUSG00000021185	protein_coding	Dglucy	ENSMUST00000222484	retained_intron		12	1	100850336	724
ENSMUSG00000070738	protein_coding	Dgkd	ENSMUST00000027517	protein_coding	principal1	1	1	87853287	5695
ENSMUSG00000049517	protein_coding	Rps23	ENSMUST00000224430	retained_intron		13	1	90924185	450
ENSMUSG00000063253	protein_coding	Scoc	ENSMUST00000212031	protein_coding	alternative2	8	-1	83442505	409
ENSMUSG00000018733	protein_coding	Pex12	ENSMUST00000136369	protein_coding		11	-1	83298958	266
ENSMUSG00000100880	processed_pseudogene	Gm6610	ENSMUST00000186324	processed_pseudogene		15	1	74924444	762
ENSMUSG00000019978	protein_coding	Epb41l2	ENSMUST00000092645	protein_coding	principal2	10	1	25408368	4280
ENSMUSG00000025950	protein_coding	Idh1	ENSMUST00000191459	protein_coding		1	-1	65186479	372
ENSMUSG00000021185	protein_coding	Dglucy	ENSMUST00000124957	protein_coding		12	1	100867189	423
ENSMUSG00000116380	lincRNA	Gm39556	ENSMUST00000230877	lincRNA		15	1	74929437	1430
ENSMUSG00000112445	processed_pseudogene	Gm47830	ENSMUST00000219193	processed_pseudogene		10	-1	25416185	634
ENSMUSG00000025950	protein_coding	Idh1	ENSMUST00000169032	protein_coding	principal1	1	-1	65186479	2283
ENSMUSG00000070738	protein_coding	Dgkd	ENSMUST00000190243	retained_intron		1	1	87880435	483
ENSMUSG00000063253	protein_coding	Scoc	ENSMUST00000212871	retained_intron		8	-1	83442495	1535
ENSMUSG00000099600	unprocessed_pseudogene	Gm29126	ENSMUST00000188686	unprocessed_pseudogene		15	-1	74953480	151
ENSMUSG00000021185	protein_coding	Dglucy	ENSMUST00000133970	processed_transcript		12	1	100885880	383
ENSMUSG00000063253	protein_coding	Scoc	ENSMUST00000212500	protein_coding		8	-1	83439244	270
ENSMUSG00000083486	processed_pseudogene	Gm14521	ENSMUST00000119545	processed_pseudogene		X	-1	12180067	350
ENSMUSG00000070738	protein_coding	Dgkd	ENSMUST00000191589	retained_intron		1	1	87917898	659
ENSMUSG00000021185	protein_coding	Dglucy	ENSMUST00000167322	protein_coding	principal2	12	1	100786142	2941
ENSMUSG00000063253	protein_coding	Scoc	ENSMUST00000212849	retained_intron		8	-1	83458391	435
ENSMUSG00000070738	protein_coding	Dgkd	ENSMUST00000185260	protein_coding		1	1	87931982	653
ENSMUSG00000118530	processed_pseudogene	AC126262.1	ENSMUST00000238798	processed_pseudogene		12	1	100897275	141
ENSMUSG00000037353	protein_coding	Letmd1	ENSMUST00000229596	retained_intron		15	1	100469145	2917
ENSMUSG00000019872	protein_coding	Smpdl3a	ENSMUST00000151623	protein_coding		10	1	57794335	376
ENSMUSG00000063430	protein_coding	Wscd2	ENSMUST00000094452	protein_coding	principal1	5	1	113490447	4302
ENSMUSG00000037353	protein_coding	Letmd1	ENSMUST00000231001	retained_intron		15	1	100472407	2153
ENSMUSG00000070738	protein_coding	Dgkd	ENSMUST00000190061	protein_coding		1	1	87934397	3759
ENSMUSG00000027377	protein_coding	Mall	ENSMUST00000028856	protein_coding	principal1	2	-1	127729932	2006
ENSMUSG00000037353	protein_coding	Letmd1	ENSMUST00000230579	retained_intron		15	1	100472558	747
ENSMUSG00000087591	lincRNA	Gm14635	ENSMUST00000146535	lincRNA		X	-1	12354996	1409
ENSMUSG00000037353	protein_coding	Letmd1	ENSMUST00000229457	retained_intron		15	1	100475060	630
ENSMUSG00000063430	protein_coding	Wscd2	ENSMUST00000181650	retained_intron		5	1	113490752	4351
ENSMUSG00000087591	lincRNA	Gm14635	ENSMUST00000137281	lincRNA		X	-1	12345222	643
ENSMUSG00000037353	protein_coding	Letmd1	ENSMUST00000229372	retained_intron		15	1	100476742	497
ENSMUSG00000070738	protein_coding	Dgkd	ENSMUST00000189726	retained_intron		1	1	87935283	870
ENSMUSG00000081837	processed_pseudogene	Gm14649	ENSMUST00000121814	processed_pseudogene		X	-1	58184486	324
ENSMUSG00000083518	processed_pseudogene	Gm9429	ENSMUST00000117804	processed_pseudogene		X	1	8034212	868
ENSMUSG00000063430	protein_coding	Wscd2	ENSMUST00000180565	retained_intron		5	1	113549985	6525
ENSMUSG00000070738	protein_coding	Dgkd	ENSMUST00000189448	protein_coding		1	1	87938385	716
ENSMUSG00000084044	processed_pseudogene	Gm14647	ENSMUST00000119392	processed_pseudogene		X	1	58225079	680
ENSMUSG00000080877	processed_pseudogene	Rpl22-ps1	ENSMUST00000118652	processed_pseudogene		X	-1	8038996	386
ENSMUSG00000039167	protein_coding	Adgrl4	ENSMUST00000046977	protein_coding	principal1	3	1	151437887	4106
ENSMUSG00000082404	processed_pseudogene	Gm14799	ENSMUST00000117502	processed_pseudogene		X	-1	8042893	429
ENSMUSG00000040374	protein_coding	Pex2	ENSMUST00000191916	protein_coding	principal1	3	-1	5563729	1376
ENSMUSG00000039167	protein_coding	Adgrl4	ENSMUST00000238382	retained_intron		3	1	151437896	1061
ENSMUSG00000063430	protein_coding	Wscd2	ENSMUST00000181294	processed_transcript		5	1	113570919	2490
ENSMUSG00000063430	protein_coding	Wscd2	ENSMUST00000198673	processed_transcript		5	1	113578788	3079
ENSMUSG00000039167	protein_coding	Adgrl4	ENSMUST00000196970	protein_coding		3	1	151437928	599
ENSMUSG00000092338	lincRNA	Gm26940	ENSMUST00000174851	lincRNA		17	-1	34025070	105
ENSMUSG00000039167	protein_coding	Adgrl4	ENSMUST00000155652	processed_transcript		3	1	151438274	345
ENSMUSG00000029420	protein_coding	Rimbp2	ENSMUST00000199537	protein_coding	alternative2	5	-1	128820069	6966
ENSMUSG00000111812	processed_pseudogene	Gm7904	ENSMUST00000217049	processed_pseudogene		9	-1	21608327	465
ENSMUSG00000047415	protein_coding	Gpr68	ENSMUST00000110066	protein_coding	principal1	12	-1	100908198	3223
ENSMUSG00000039167	protein_coding	Adgrl4	ENSMUST00000141038	retained_intron		3	1	151439098	783
ENSMUSG00000044636	protein_coding	Csrnp2	ENSMUST00000061457	protein_coding	principal1	15	-1	100495488	4375
ENSMUSG00000019872	protein_coding	Smpdl3a	ENSMUST00000020022	protein_coding	principal1	10	1	57794374	1961
ENSMUSG00000039167	protein_coding	Adgrl4	ENSMUST00000238268	nonsense_mediated_decay		3	1	151439338	798
ENSMUSG00000039167	protein_coding	Adgrl4	ENSMUST00000238194	processed_transcript		3	1	151494203	451
ENSMUSG00000040374	protein_coding	Pex2	ENSMUST00000195855	protein_coding	principal1	3	-1	5576145	1587
ENSMUSG00000031877	protein_coding	Ces2g	ENSMUST00000043183	protein_coding	principal1	8	1	104961718	2859
ENSMUSG00000019872	protein_coding	Smpdl3a	ENSMUST00000125076	processed_transcript		10	1	57794568	849
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000112097	protein_coding	alternative2	5	-1	115272898	3476
ENSMUSG00000039167	protein_coding	Adgrl4	ENSMUST00000129283	nonsense_mediated_decay		3	1	151500071	625
ENSMUSG00000029420	protein_coding	Rimbp2	ENSMUST00000198941	protein_coding	principal3	5	-1	128820022	6446
ENSMUSG00000039167	protein_coding	Adgrl4	ENSMUST00000198893	processed_transcript		3	1	151517429	498
ENSMUSG00000047415	protein_coding	Gpr68	ENSMUST00000110065	protein_coding	principal1	12	-1	100908181	2900
ENSMUSG00000031877	protein_coding	Ces2g	ENSMUST00000212330	retained_intron		8	1	104961775	2490
ENSMUSG00000037656	protein_coding	Slc20a2	ENSMUST00000067786	protein_coding	principal1	8	1	22476788	3566
ENSMUSG00000029420	protein_coding	Rimbp2	ENSMUST00000239036	protein_coding		5	-1	128761380	455
ENSMUSG00000002847	protein_coding	Pla1a	ENSMUST00000002926	protein_coding	principal1	16	-1	38433145	1974
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000126878	retained_intron		4	1	43058953	712
ENSMUSG00000040283	protein_coding	Btnl9	ENSMUST00000046522	protein_coding	principal2	11	-1	49187159	5273
ENSMUSG00000002847	protein_coding	Pla1a	ENSMUST00000232224	processed_transcript		16	-1	38417794	415
ENSMUSG00000040374	protein_coding	Pex2	ENSMUST00000059021	protein_coding	principal1	3	-1	5576239	1749
ENSMUSG00000047415	protein_coding	Gpr68	ENSMUST00000135684	processed_transcript		12	-1	100899498	444
ENSMUSG00000037656	protein_coding	Slc20a2	ENSMUST00000209305	protein_coding		8	1	22476900	490
ENSMUSG00000037656	protein_coding	Slc20a2	ENSMUST00000209347	processed_transcript		8	1	22506125	371
ENSMUSG00000047415	protein_coding	Gpr68	ENSMUST00000124459	processed_transcript		12	-1	100908198	567
ENSMUSG00000037656	protein_coding	Slc20a2	ENSMUST00000210854	protein_coding		8	1	22506226	436
ENSMUSG00000110391	unprocessed_pseudogene	Gm7269	ENSMUST00000210819	unprocessed_pseudogene		10	-1	112049286	1373
ENSMUSG00000040283	protein_coding	Btnl9	ENSMUST00000066531	protein_coding	alternative2	11	-1	49187045	1945
ENSMUSG00000037656	protein_coding	Slc20a2	ENSMUST00000210388	retained_intron		8	1	22538779	2522
ENSMUSG00000047415	protein_coding	Gpr68	ENSMUST00000128306	processed_transcript		12	-1	100899524	483
ENSMUSG00000047415	protein_coding	Gpr68	ENSMUST00000222453	retained_intron		12	-1	100899405	3817
ENSMUSG00000082688	processed_pseudogene	Gm12124	ENSMUST00000120504	processed_pseudogene		11	1	35792781	679
ENSMUSG00000047415	protein_coding	Gpr68	ENSMUST00000053668	protein_coding	principal1	12	-1	100899524	3099
ENSMUSG00000040283	protein_coding	Btnl9	ENSMUST00000131363	retained_intron		11	-1	49170675	449
ENSMUSG00000040283	protein_coding	Btnl9	ENSMUST00000153999	protein_coding		11	-1	49187037	687
ENSMUSG00000081288	processed_pseudogene	Gm11386	ENSMUST00000117761	processed_pseudogene		13	-1	33531959	347
ENSMUSG00000040374	protein_coding	Pex2	ENSMUST00000071280	protein_coding	principal1	3	-1	5576128	1777
ENSMUSG00000082604	processed_pseudogene	Gm8482	ENSMUST00000117972	processed_pseudogene		12	-1	100864439	471
ENSMUSG00000113159	TEC	Gm48771	ENSMUST00000221802	TEC		12	1	100862786	1904
ENSMUSG00000082722	unprocessed_pseudogene	Gm11393	ENSMUST00000118019	unprocessed_pseudogene		13	1	33542999	288
ENSMUSG00000040283	protein_coding	Btnl9	ENSMUST00000128462	processed_transcript		11	-1	49187067	633
ENSMUSG00000107758	processed_pseudogene	Gm19253	ENSMUST00000204279	processed_pseudogene		6	1	49071630	307
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000040555	protein_coding	alternative2	5	-1	115272892	3106
ENSMUSG00000118230	processed_pseudogene	Gm50200	ENSMUST00000235284	processed_pseudogene		18	-1	57315140	270
ENSMUSG00000097576	antisense	D930030I03Rik	ENSMUST00000180735	antisense		16	1	38451982	921
ENSMUSG00000040374	protein_coding	Pex2	ENSMUST00000165309	protein_coding	principal1	3	-1	5576150	2038
ENSMUSG00000097576	antisense	D930030I03Rik	ENSMUST00000231660	antisense		16	1	38452390	485
ENSMUSG00000118343	lincRNA	Gm50201	ENSMUST00000235655	lincRNA		18	1	57316397	279
ENSMUSG00000001150	protein_coding	Mcm3ap	ENSMUST00000170795	protein_coding	principal1	10	1	76468927	6427
ENSMUSG00000051062	protein_coding	Fbll1	ENSMUST00000160726	protein_coding	principal1	11	-1	35798884	1503
ENSMUSG00000001150	protein_coding	Mcm3ap	ENSMUST00000218881	nonsense_mediated_decay		10	1	76481118	578
ENSMUSG00000040374	protein_coding	Pex2	ENSMUST00000164828	protein_coding	principal1	3	-1	5576150	2051
ENSMUSG00000025938	protein_coding	Slco5a1	ENSMUST00000188454	protein_coding	principal2	1	-1	12992650	8463
ENSMUSG00000001150	protein_coding	Mcm3ap	ENSMUST00000220410	processed_transcript		10	1	76481201	698
ENSMUSG00000112963	lincRNA	Gm6093	ENSMUST00000222963	lincRNA		13	-1	33569317	2163
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000238233	protein_coding	alternative2	11	-1	97536945	6624
ENSMUSG00000025938	protein_coding	Slco5a1	ENSMUST00000115402	protein_coding	alternative2	1	-1	12991177	3690
ENSMUSG00000001150	protein_coding	Mcm3ap	ENSMUST00000219811	retained_intron		10	1	76504288	565
ENSMUSG00000112963	lincRNA	Gm6093	ENSMUST00000221792	lincRNA		13	-1	33568869	1623
ENSMUSG00000044176	protein_coding	Spink10	ENSMUST00000055725	protein_coding	principal1	18	1	62548911	7817
ENSMUSG00000001150	protein_coding	Mcm3ap	ENSMUST00000218361	protein_coding		10	1	76508389	465
ENSMUSG00000047473	protein_coding	Zfp30	ENSMUST00000032803	protein_coding	principal1	7	1	29783998	3558
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000112096	protein_coding	principal3	5	-1	115272895	3112
ENSMUSG00000113016	lincRNA	Gm47916	ENSMUST00000220489	lincRNA		13	1	33569021	504
ENSMUSG00000113398	processed_pseudogene	Gm5194	ENSMUST00000221457	processed_pseudogene		13	-1	33596776	742
ENSMUSG00000001150	protein_coding	Mcm3ap	ENSMUST00000218904	retained_intron		10	1	76510894	378
ENSMUSG00000035754	protein_coding	Wdr18	ENSMUST00000045247	protein_coding	principal1	10	1	79960152	3911
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000023214	protein_coding	principal1	15	-1	76511951	1888
ENSMUSG00000108363	processed_pseudogene	Gm44615	ENSMUST00000206548	processed_pseudogene		7	1	55636453	358
ENSMUSG00000002844	protein_coding	Adprh	ENSMUST00000002923	protein_coding	principal1	16	-1	38452703	2966
ENSMUSG00000047473	protein_coding	Zfp30	ENSMUST00000126504	retained_intron		7	1	29784023	3707
ENSMUSG00000044176	protein_coding	Spink10	ENSMUST00000162365	protein_coding		18	1	62548944	1076
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000153553	retained_intron		5	-1	115242689	833
ENSMUSG00000044176	protein_coding	Spink10	ENSMUST00000160316	protein_coding		18	1	62646255	480
ENSMUSG00000035754	protein_coding	Wdr18	ENSMUST00000220272	retained_intron		10	1	79960155	1572
ENSMUSG00000025938	protein_coding	Slco5a1	ENSMUST00000136197	protein_coding		1	-1	12991135	5123
ENSMUSG00000035754	protein_coding	Wdr18	ENSMUST00000218449	retained_intron		10	1	79965504	674
ENSMUSG00000107727	processed_pseudogene	Gm18010	ENSMUST00000203553	processed_pseudogene		6	1	49172759	202
ENSMUSG00000047473	protein_coding	Zfp30	ENSMUST00000122387	protein_coding		7	1	29784084	3342
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000139853	nonsense_mediated_decay		5	-1	115272301	2408
ENSMUSG00000002844	protein_coding	Adprh	ENSMUST00000232145	processed_transcript		16	-1	38452682	511
ENSMUSG00000035754	protein_coding	Wdr18	ENSMUST00000220249	retained_intron		10	1	79966464	473
ENSMUSG00000044176	protein_coding	Spink10	ENSMUST00000087562	processed_transcript		18	1	62650450	326
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000128954	retained_intron		5	-1	115246075	657
ENSMUSG00000025938	protein_coding	Slco5a1	ENSMUST00000146763	protein_coding		1	-1	12990914	3437
ENSMUSG00000044176	protein_coding	Spink10	ENSMUST00000161674	protein_coding		18	1	62650504	211
ENSMUSG00000058537	protein_coding	AW822073	ENSMUST00000204003	protein_coding	principal1	10	-1	58224930	1959
ENSMUSG00000058537	protein_coding	AW822073	ENSMUST00000075305	protein_coding		10	-1	58223526	555
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000152613	processed_transcript		5	-1	115249487	364
ENSMUSG00000025938	protein_coding	Slco5a1	ENSMUST00000147606	protein_coding		1	-1	12990914	3615
ENSMUSG00000035754	protein_coding	Wdr18	ENSMUST00000218515	retained_intron		10	1	79967035	920
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000133276	retained_intron		5	-1	115255627	447
ENSMUSG00000025938	protein_coding	Slco5a1	ENSMUST00000133201	processed_transcript		1	-1	12925043	660
ENSMUSG00000057216	unprocessed_pseudogene	Gm10807	ENSMUST00000177134	unprocessed_pseudogene		10	-1	58228651	795
ENSMUSG00000044176	protein_coding	Spink10	ENSMUST00000162511	protein_coding		18	1	62657292	784
ENSMUSG00000025938	protein_coding	Slco5a1	ENSMUST00000191566	processed_transcript		1	-1	12991177	3288
ENSMUSG00000044176	protein_coding	Spink10	ENSMUST00000163259	protein_coding		18	1	62662108	821
ENSMUSG00000029331	antisense	4930522N08Rik	ENSMUST00000031274	antisense		5	1	99682999	916
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000160294	retained_intron		15	-1	76503180	885
ENSMUSG00000025938	protein_coding	Slco5a1	ENSMUST00000115403	protein_coding	principal2	1	-1	12991135	8509
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000151085	processed_transcript		5	-1	115260226	600
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000202855	retained_intron		5	-1	115257892	1672
ENSMUSG00000029815	protein_coding	Malsu1	ENSMUST00000128616	protein_coding	principal1	6	1	49073795	2819
ENSMUSG00000114278	protein_coding	Gm49027	ENSMUST00000197682	protein_coding	principal1	5	-1	123525429	1897
ENSMUSG00000041740	protein_coding	Rnf10	ENSMUST00000200923	retained_intron		5	-1	115272895	2276
ENSMUSG00000026960	protein_coding	Arl6ip6	ENSMUST00000028336	protein_coding	principal1	2	1	53192088	2548
ENSMUSG00000020213	protein_coding	Glipr1l1	ENSMUST00000073617	protein_coding	principal1	10	1	112060189	896
ENSMUSG00000114278	protein_coding	Gm49027	ENSMUST00000198565	protein_coding	principal1	5	-1	123525488	346
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000159908	retained_intron		15	-1	76503314	742
ENSMUSG00000105686	lincRNA	Gm35394	ENSMUST00000196434	lincRNA		5	1	99274095	3252
ENSMUSG00000029815	protein_coding	Malsu1	ENSMUST00000114500	nonsense_mediated_decay		6	1	49073848	2587
ENSMUSG00000029420	protein_coding	Rimbp2	ENSMUST00000196085	protein_coding	alternative2	5	-1	128953055	3732
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000029446	protein_coding	principal3	3	1	103020426	4318
ENSMUSG00000028565	protein_coding	Nfia	ENSMUST00000152023	protein_coding		4	1	97772734	851
ENSMUSG00000029815	protein_coding	Malsu1	ENSMUST00000031839	processed_transcript		6	1	49073892	481
ENSMUSG00000050335	protein_coding	Lgals3	ENSMUST00000151405	protein_coding		14	1	47367751	646
ENSMUSG00000029420	protein_coding	Rimbp2	ENSMUST00000200470	protein_coding	alternative2	5	-1	128953486	4083
ENSMUSG00000029815	protein_coding	Malsu1	ENSMUST00000205243	processed_transcript		6	1	49074074	720
ENSMUSG00000026960	protein_coding	Arl6ip6	ENSMUST00000155517	processed_transcript		2	1	53191726	582
ENSMUSG00000029420	protein_coding	Rimbp2	ENSMUST00000238334	protein_coding	alternative2	5	-1	128845671	4101
ENSMUSG00000029431	protein_coding	B3gnt4	ENSMUST00000031384	protein_coding	principal1	5	1	123510460	1423
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000198180	protein_coding	alternative1	3	1	103020607	3849
ENSMUSG00000034659	protein_coding	Tmem109	ENSMUST00000038128	protein_coding	principal1	19	-1	10882001	2188
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000197827	protein_coding	principal3	3	1	103020612	2671
ENSMUSG00000029420	protein_coding	Rimbp2	ENSMUST00000199737	protein_coding		5	-1	128877066	620
ENSMUSG00000029815	protein_coding	Malsu1	ENSMUST00000139726	retained_intron		6	1	49082585	518
ENSMUSG00000089743	antisense	Gm16226	ENSMUST00000159950	antisense		5	1	99682410	760
ENSMUSG00000029420	protein_coding	Rimbp2	ENSMUST00000196569	processed_transcript		5	-1	128953033	329
ENSMUSG00000089743	antisense	Gm16226	ENSMUST00000160096	antisense		5	1	99682410	354
ENSMUSG00000029420	protein_coding	Rimbp2	ENSMUST00000111346	protein_coding	principal3	5	-1	128953362	4264
ENSMUSG00000034659	protein_coding	Tmem109	ENSMUST00000133303	protein_coding		19	-1	10880370	839
ENSMUSG00000086753	sense_overlapping	Gm15751	ENSMUST00000134552	sense_overlapping		5	1	123508395	1862
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000199240	protein_coding		3	1	103020613	3457
ENSMUSG00000024527	protein_coding	Afg3l2	ENSMUST00000025408	protein_coding	principal1	18	-1	67449172	3094
ENSMUSG00000089743	antisense	Gm16226	ENSMUST00000162639	antisense		5	1	99682415	423
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000199420	protein_coding	alternative1	3	1	103020613	4185
ENSMUSG00000034659	protein_coding	Tmem109	ENSMUST00000138897	retained_intron		19	-1	10874737	615
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000141600	protein_coding		6	1	58831465	438
ENSMUSG00000057181	protein_coding	5730455P16Rik	ENSMUST00000103225	protein_coding	principal2	11	-1	80378034	4554
ENSMUSG00000106522	sense_intronic	Gm42871	ENSMUST00000199333	sense_intronic		5	-1	128775550	315
ENSMUSG00000034659	protein_coding	Tmem109	ENSMUST00000147699	protein_coding		19	-1	10882001	1096
ENSMUSG00000021619	protein_coding	Atg10	ENSMUST00000022119	protein_coding	principal1	13	-1	91223968	1583
ENSMUSG00000089743	antisense	Gm16226	ENSMUST00000161197	antisense		5	1	99682439	395
ENSMUSG00000115193	processed_pseudogene	Gm6533	ENSMUST00000227365	processed_pseudogene		15	1	23489891	608
ENSMUSG00000073551	protein_coding	Spink13	ENSMUST00000235190	protein_coding	principal1	18	-1	62615869	721
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000122981	protein_coding		6	1	58831503	676
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000199571	protein_coding	alternative1	3	1	103020620	3123
ENSMUSG00000115788	processed_pseudogene	Gm48915	ENSMUST00000227313	processed_pseudogene		15	-1	23624200	260
ENSMUSG00000034659	protein_coding	Tmem109	ENSMUST00000129052	retained_intron		19	-1	10881711	619
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000162354	processed_transcript		15	-1	76503945	569
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000197488	protein_coding	alternative1	3	1	103020664	3827
ENSMUSG00000034659	protein_coding	Tmem109	ENSMUST00000144681	protein_coding		19	-1	10881731	396
ENSMUSG00000115129	TEC	Gm48916	ENSMUST00000228912	TEC		15	-1	23729653	3861
ENSMUSG00000057181	protein_coding	5730455P16Rik	ENSMUST00000149614	retained_intron		11	-1	80368395	478
ENSMUSG00000057181	protein_coding	5730455P16Rik	ENSMUST00000134274	protein_coding		11	-1	80378034	723
ENSMUSG00000115365	processed_pseudogene	Gm18582	ENSMUST00000227902	processed_pseudogene		15	-1	23853910	1947
ENSMUSG00000024527	protein_coding	Afg3l2	ENSMUST00000237178	retained_intron		18	-1	67435948	3462
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000198906	retained_intron		3	1	103029002	4277
ENSMUSG00000021619	protein_coding	Atg10	ENSMUST00000224449	nonsense_mediated_decay		13	-1	91223959	922
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000196521	retained_intron		3	1	103029095	1803
ENSMUSG00000021619	protein_coding	Atg10	ENSMUST00000223729	processed_transcript		13	-1	91125610	826
ENSMUSG00000034659	protein_coding	Tmem109	ENSMUST00000128835	protein_coding		19	-1	10881698	397
ENSMUSG00000024527	protein_coding	Afg3l2	ENSMUST00000235409	retained_intron		18	-1	67449107	1034
ENSMUSG00000073551	protein_coding	Spink13	ENSMUST00000097557	protein_coding	principal1	18	-1	62741387	796
ENSMUSG00000034659	protein_coding	Tmem109	ENSMUST00000151355	processed_transcript		19	-1	10881698	432
ENSMUSG00000024527	protein_coding	Afg3l2	ENSMUST00000236810	retained_intron		18	-1	67449109	4664
ENSMUSG00000083042	unprocessed_pseudogene	Gm11388	ENSMUST00000120908	unprocessed_pseudogene		13	1	33641625	159
ENSMUSG00000074088	protein_coding	Snrnp40	ENSMUST00000105994	protein_coding	principal1	4	1	130360132	1584
ENSMUSG00000057181	protein_coding	5730455P16Rik	ENSMUST00000179332	protein_coding	alternative2	11	-1	80378015	4536
ENSMUSG00000082069	unprocessed_pseudogene	Gm16242	ENSMUST00000117741	unprocessed_pseudogene		6	-1	129813936	334
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000230722	processed_transcript		15	-1	76511680	803
ENSMUSG00000117712	processed_pseudogene	Gm19159	ENSMUST00000236939	processed_pseudogene		18	1	62671261	985
ENSMUSG00000074088	protein_coding	Snrnp40	ENSMUST00000180577	processed_transcript		4	1	130360194	1752
ENSMUSG00000027469	protein_coding	Tpx2	ENSMUST00000109816	protein_coding	principal1	2	1	152847978	3483
ENSMUSG00000074088	protein_coding	Snrnp40	ENSMUST00000181161	processed_transcript		4	1	130362627	489
ENSMUSG00000060201	protein_coding	Spink7	ENSMUST00000076194	protein_coding	principal1	18	-1	62596327	540
ENSMUSG00000027469	protein_coding	Tpx2	ENSMUST00000028969	protein_coding	principal1	2	1	152847995	3654
ENSMUSG00000074088	protein_coding	Snrnp40	ENSMUST00000181560	processed_transcript		4	1	130385022	1048
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000160293	processed_transcript		15	-1	76506605	602
ENSMUSG00000027469	protein_coding	Tpx2	ENSMUST00000136407	processed_transcript		2	1	152848082	380
ENSMUSG00000086061	antisense	Gm13075	ENSMUST00000148320	antisense		4	1	141398829	561
ENSMUSG00000060201	protein_coding	Spink7	ENSMUST00000235321	processed_transcript		18	-1	62596264	232
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000162813	retained_intron		15	-1	76504322	564
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000161499	retained_intron		15	-1	76505195	1116
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000203714	protein_coding		6	1	58831524	374
ENSMUSG00000027469	protein_coding	Tpx2	ENSMUST00000144848	retained_intron		2	1	152869601	733
ENSMUSG00000110576	protein_coding	Gm36368	ENSMUST00000236302	protein_coding	alternative2	18	-1	62579152	371
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000126292	protein_coding		6	1	58831748	446
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000159776	retained_intron		15	-1	76504663	584
ENSMUSG00000086061	antisense	Gm13075	ENSMUST00000149247	antisense		4	1	141398857	1621
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000198944	processed_transcript		3	1	103030165	814
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000231035	retained_intron		15	-1	76511674	780
ENSMUSG00000057421	protein_coding	Las1l	ENSMUST00000079987	protein_coding	principal2	X	-1	95956913	2530
ENSMUSG00000027469	protein_coding	Tpx2	ENSMUST00000143740	retained_intron		2	1	152882269	358
ENSMUSG00000110576	protein_coding	Gm36368	ENSMUST00000212026	protein_coding	principal5	18	-1	62578931	505
ENSMUSG00000000392	protein_coding	Fap	ENSMUST00000102732	protein_coding	principal1	2	-1	62574075	2751
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000197154	processed_transcript		3	1	103039740	604
ENSMUSG00000051451	protein_coding	Crebzf	ENSMUST00000061767	protein_coding	principal1	7	1	90442729	3376
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000200617	retained_intron		3	1	103039999	612
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000230894	processed_transcript		15	-1	76511953	788
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000133026	nonsense_mediated_decay		8	1	107293470	13443
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000195889	nonsense_mediated_decay		3	1	103040028	733
ENSMUSG00000057421	protein_coding	Las1l	ENSMUST00000113864	protein_coding	alternative2	X	-1	95956913	2581
ENSMUSG00000027551	protein_coding	Zfp64	ENSMUST00000109162	protein_coding	principal1	2	-1	168955587	2848
ENSMUSG00000022555	protein_coding	Dgat1	ENSMUST00000229569	processed_transcript		15	-1	76511826	659
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000111581	protein_coding		15	-1	77153786	3072
ENSMUSG00000027551	protein_coding	Zfp64	ENSMUST00000124599	protein_coding		2	-1	168912633	548
ENSMUSG00000084305	processed_pseudogene	Gm14645	ENSMUST00000118597	processed_pseudogene		X	-1	58428075	417
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000198174	nonsense_mediated_decay		3	1	103043193	2584
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000197939	retained_intron		3	1	103043542	580
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000196685	retained_intron		3	1	103050001	506
ENSMUSG00000000392	protein_coding	Fap	ENSMUST00000152085	processed_transcript		2	-1	62573980	1269
ENSMUSG00000048153	protein_coding	Olfr49	ENSMUST00000216214	protein_coding	principal1	14	-1	54284939	5717
ENSMUSG00000025869	protein_coding	Nop16	ENSMUST00000026987	protein_coding	principal1	13	-1	54590090	1756
ENSMUSG00000000392	protein_coding	Fap	ENSMUST00000128139	nonsense_mediated_decay		2	-1	62503424	467
ENSMUSG00000001323	protein_coding	Srr	ENSMUST00000108448	protein_coding	principal1	11	-1	74925773	3239
ENSMUSG00000068823	protein_coding	Csde1	ENSMUST00000197844	retained_intron		3	1	103056054	671
ENSMUSG00000048153	protein_coding	Olfr49	ENSMUST00000059996	protein_coding	principal1	14	-1	54282925	1030
ENSMUSG00000000392	protein_coding	Fap	ENSMUST00000174234	protein_coding		2	-1	62573851	2211
ENSMUSG00000000392	protein_coding	Fap	ENSMUST00000000402	protein_coding		2	-1	62573851	2187
ENSMUSG00000105703	processed_transcript	Gm43305	ENSMUST00000199958	retained_intron		14	-1	54297343	4901
ENSMUSG00000105703	processed_transcript	Gm43305	ENSMUST00000225083	lincRNA		14	-1	54297456	705
ENSMUSG00000000392	protein_coding	Fap	ENSMUST00000174448	protein_coding		2	-1	62573851	2271
ENSMUSG00000025869	protein_coding	Nop16	ENSMUST00000148222	protein_coding		13	-1	54590058	790
ENSMUSG00000105294	processed_pseudogene	Gm43304	ENSMUST00000196803	processed_pseudogene		14	-1	54324323	326
ENSMUSG00000027551	protein_coding	Zfp64	ENSMUST00000087971	protein_coding		2	-1	168955272	2438
ENSMUSG00000050335	protein_coding	Lgals3	ENSMUST00000142734	protein_coding	principal1	14	1	47373813	1419
ENSMUSG00000025869	protein_coding	Nop16	ENSMUST00000149462	nonsense_mediated_decay		13	-1	54589976	677
ENSMUSG00000027469	protein_coding	Tpx2	ENSMUST00000164120	protein_coding	principal1	2	1	152847964	4365
ENSMUSG00000068154	protein_coding	Insm1	ENSMUST00000089257	protein_coding	principal1	2	1	146221921	3100
ENSMUSG00000029814	protein_coding	Igf2bp3	ENSMUST00000031838	protein_coding	principal1	6	-1	49214957	4345
ENSMUSG00000006216	protein_coding	Clcnkb	ENSMUST00000135486	protein_coding		4	-1	141405357	453
ENSMUSG00000057421	protein_coding	Las1l	ENSMUST00000126605	retained_intron		X	-1	95956886	4126
ENSMUSG00000028861	protein_coding	Mrps15	ENSMUST00000030675	protein_coding	principal1	4	1	126046925	937
ENSMUSG00000027551	protein_coding	Zfp64	ENSMUST00000109161	protein_coding		2	-1	168955289	1009
ENSMUSG00000051451	protein_coding	Crebzf	ENSMUST00000107206	nonsense_mediated_decay		7	1	90443669	891
ENSMUSG00000083501	processed_pseudogene	Gm12255	ENSMUST00000117184	processed_pseudogene		11	-1	58533103	284
ENSMUSG00000021716	protein_coding	Srek1ip1	ENSMUST00000022230	protein_coding	principal1	13	1	104817177	2365
ENSMUSG00000057421	protein_coding	Las1l	ENSMUST00000137659	processed_transcript		X	-1	95947455	862
ENSMUSG00000029814	protein_coding	Igf2bp3	ENSMUST00000205057	retained_intron		6	-1	49094211	581
ENSMUSG00000027551	protein_coding	Zfp64	ENSMUST00000136242	retained_intron		2	-1	168955266	1352
ENSMUSG00000057421	protein_coding	Las1l	ENSMUST00000152181	processed_transcript		X	-1	95948203	778
ENSMUSG00000051451	protein_coding	Crebzf	ENSMUST00000126041	nonsense_mediated_decay		7	1	90443670	792
ENSMUSG00000027469	protein_coding	Tpx2	ENSMUST00000178997	protein_coding	principal1	2	1	152847964	4161
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000227314	protein_coding		15	-1	77153556	1810
ENSMUSG00000028861	protein_coding	Mrps15	ENSMUST00000124614	processed_transcript		4	1	126047234	328
ENSMUSG00000057421	protein_coding	Las1l	ENSMUST00000147994	processed_transcript		X	-1	95951058	945
ENSMUSG00000050818	protein_coding	Olfr330	ENSMUST00000213188	protein_coding	principal1	11	-1	58534836	2836
ENSMUSG00000005142	protein_coding	Man2b1	ENSMUST00000034121	protein_coding	principal1	8	1	85083315	3822
ENSMUSG00000028861	protein_coding	Mrps15	ENSMUST00000138739	processed_transcript		4	1	126046977	1037
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000227930	protein_coding		15	-1	77153556	1218
ENSMUSG00000021716	protein_coding	Srek1ip1	ENSMUST00000156105	nonsense_mediated_decay		13	1	104817239	1806
ENSMUSG00000057421	protein_coding	Las1l	ENSMUST00000139717	retained_intron		X	-1	95956962	4625
ENSMUSG00000050335	protein_coding	Lgals3	ENSMUST00000150290	protein_coding	principal1	14	1	47373889	1298
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000228087	protein_coding	alternative2	15	-1	77153754	1694
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000107596	protein_coding	principal2	11	-1	97575215	7054
ENSMUSG00000029814	protein_coding	Igf2bp3	ENSMUST00000203544	retained_intron		6	-1	49214161	4152
ENSMUSG00000025478	protein_coding	Dpysl4	ENSMUST00000026551	protein_coding	principal1	7	1	139086001	3552
ENSMUSG00000050818	protein_coding	Olfr330	ENSMUST00000134055	protein_coding	principal1	11	-1	58530070	1134
ENSMUSG00000005142	protein_coding	Man2b1	ENSMUST00000211379	retained_intron		8	1	85084288	3459
ENSMUSG00000029814	protein_coding	Igf2bp3	ENSMUST00000203863	processed_transcript		6	-1	49111100	512
ENSMUSG00000021716	protein_coding	Srek1ip1	ENSMUST00000145661	processed_transcript		13	1	104792484	1443
ENSMUSG00000005142	protein_coding	Man2b1	ENSMUST00000211223	retained_intron		8	1	85086458	1341
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000238314	protein_coding	alternative2	11	-1	97575226	7089
ENSMUSG00000029814	protein_coding	Igf2bp3	ENSMUST00000203680	processed_transcript		6	-1	49214704	711
ENSMUSG00000110479	transcribed_unprocessed_pseudogene	Gm5743	ENSMUST00000212004	transcribed_unprocessed_pseudogene		8	1	104984464	1647
ENSMUSG00000110479	transcribed_unprocessed_pseudogene	Gm5743	ENSMUST00000211864	processed_transcript		8	1	104995211	260
ENSMUSG00000021716	protein_coding	Srek1ip1	ENSMUST00000137278	retained_intron		13	1	104826658	611
ENSMUSG00000107990	processed_pseudogene	Gm7890	ENSMUST00000204877	processed_pseudogene		6	-1	49081062	601
ENSMUSG00000112086	processed_pseudogene	Gm35412	ENSMUST00000220437	processed_pseudogene		12	-1	98100355	999
ENSMUSG00000050335	protein_coding	Lgals3	ENSMUST00000226585	protein_coding		14	1	47373916	210
ENSMUSG00000014609	protein_coding	Chrne	ENSMUST00000102556	protein_coding	principal2	11	-1	70619194	1591
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000107593	protein_coding	alternative2	11	-1	97574053	3733
ENSMUSG00000051451	protein_coding	Crebzf	ENSMUST00000143408	nonsense_mediated_decay		7	1	90443678	1380
ENSMUSG00000050335	protein_coding	Lgals3	ENSMUST00000144794	protein_coding		14	1	47373916	368
ENSMUSG00000099413	lincRNA	Gm17767	ENSMUST00000190169	lincRNA		1	-1	51512329	3049
ENSMUSG00000027710	protein_coding	Acad9	ENSMUST00000011492	protein_coding	principal1	3	1	36065979	3930
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000048145	protein_coding		15	-1	77306605	1720
ENSMUSG00000021716	protein_coding	Srek1ip1	ENSMUST00000147061	retained_intron		13	1	104834046	2182
ENSMUSG00000064252	protein_coding	Olfr329	ENSMUST00000219448	protein_coding	principal2	11	-1	58546422	4052
ENSMUSG00000051451	protein_coding	Crebzf	ENSMUST00000107205	nonsense_mediated_decay		7	1	90443755	537
ENSMUSG00000112812	lincRNA	Gm47415	ENSMUST00000219545	lincRNA		12	-1	98108561	2873
ENSMUSG00000112812	lincRNA	Gm47415	ENSMUST00000220264	lincRNA		12	-1	98108567	2510
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000107590	protein_coding	alternative2	11	-1	97573944	5493
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000228253	protein_coding		15	-1	77086155	482
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000238597	protein_coding	alternative2	11	-1	97575226	5726
ENSMUSG00000099413	lincRNA	Gm17767	ENSMUST00000189410	lincRNA		1	-1	51596718	1470
ENSMUSG00000014609	protein_coding	Chrne	ENSMUST00000014753	protein_coding	alternative2	11	-1	70619216	1616
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000238342	protein_coding	alternative2	11	-1	97575226	4493
ENSMUSG00000027710	protein_coding	Acad9	ENSMUST00000196648	protein_coding		3	1	36066067	552
ENSMUSG00000001323	protein_coding	Srr	ENSMUST00000121738	protein_coding	principal1	11	-1	74925948	3183
ENSMUSG00000064252	protein_coding	Olfr329	ENSMUST00000108823	protein_coding	principal2	11	-1	58543506	1060
ENSMUSG00000050335	protein_coding	Lgals3	ENSMUST00000146468	protein_coding	principal1	14	1	47373964	1072
ENSMUSG00000103424	TEC	Gm37535	ENSMUST00000194442	TEC		1	-1	51529369	2365
ENSMUSG00000025478	protein_coding	Dpysl4	ENSMUST00000139364	processed_transcript		7	1	139086002	540
ENSMUSG00000000392	protein_coding	Fap	ENSMUST00000172676	retained_intron		2	-1	62563717	2867
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000230194	processed_transcript		15	-1	77089700	569
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000126287	protein_coding		11	-1	97573929	1431
ENSMUSG00000001323	protein_coding	Srr	ENSMUST00000108447	protein_coding		11	-1	74925773	3138
ENSMUSG00000081461	processed_pseudogene	Rpl30-ps11	ENSMUST00000119630	processed_pseudogene		X	-1	12457230	345
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000227533	protein_coding		15	-1	77153556	1041
ENSMUSG00000101741	lincRNA	Gm28055	ENSMUST00000189576	lincRNA		1	-1	51697900	1301
ENSMUSG00000014609	protein_coding	Chrne	ENSMUST00000135920	retained_intron		11	-1	70615673	518
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000228361	protein_coding		15	-1	77245506	899
ENSMUSG00000064252	protein_coding	Olfr329	ENSMUST00000108822	protein_coding	alternative2	11	-1	58544938	1300
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000207653	protein_coding		11	-1	97574047	421
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000228558	protein_coding		15	-1	77245586	882
ENSMUSG00000000392	protein_coding	Fap	ENSMUST00000136297	retained_intron		2	-1	62573923	2343
ENSMUSG00000101741	lincRNA	Gm28055	ENSMUST00000186769	lincRNA		1	-1	51746943	572
ENSMUSG00000014609	protein_coding	Chrne	ENSMUST00000134836	retained_intron		11	-1	70615697	641
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000142123	processed_transcript		11	-1	97575226	399
ENSMUSG00000052981	protein_coding	Ube2ql1	ENSMUST00000065118	protein_coding	principal1	13	-1	69739889	2674
ENSMUSG00000100014	lincRNA	Gm29290	ENSMUST00000185385	lincRNA		1	1	153939226	597
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000228582	protein_coding		15	-1	77307004	1066
ENSMUSG00000001323	protein_coding	Srr	ENSMUST00000128556	protein_coding		11	-1	74925682	875
ENSMUSG00000114579	processed_pseudogene	Gm4130	ENSMUST00000224136	processed_pseudogene		13	-1	91262418	970
ENSMUSG00000000392	protein_coding	Fap	ENSMUST00000173745	protein_coding		2	-1	62573560	503
ENSMUSG00000051451	protein_coding	Crebzf	ENSMUST00000208379	nonsense_mediated_decay		7	1	90443879	1269
ENSMUSG00000056328	protein_coding	Myh1	ENSMUST00000124516	protein_coding	principal1	11	1	67200052	6081
ENSMUSG00000101903	lincRNA	Gm29291	ENSMUST00000188927	lincRNA		1	-1	154006217	642
ENSMUSG00000038453	protein_coding	Srcin1	ENSMUST00000145845	processed_transcript		11	-1	97576186	161
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000228190	retained_intron		15	-1	77132780	762
ENSMUSG00000046213	protein_coding	Cym	ENSMUST00000029504	protein_coding	principal1	3	-1	107221732	1236
ENSMUSG00000101903	lincRNA	Gm29291	ENSMUST00000186055	lincRNA		1	-1	154006221	686
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000226877	processed_transcript		15	-1	77203436	417
ENSMUSG00000025868	protein_coding	Higd2a	ENSMUST00000026986	protein_coding	principal1	13	1	54590207	648
ENSMUSG00000001323	protein_coding	Srr	ENSMUST00000123855	protein_coding		11	-1	74925660	578
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000097352	protein_coding	principal2	17	1	31564734	4252
ENSMUSG00000114688	lincRNA	Gm47381	ENSMUST00000225131	lincRNA		13	1	91259376	949
ENSMUSG00000056328	protein_coding	Myh1	ENSMUST00000018637	protein_coding	principal1	11	1	67200111	5938
ENSMUSG00000110749	lincRNA	Gm47931	ENSMUST00000213443	lincRNA		9	1	42946801	570
ENSMUSG00000087042	sense_intronic	Gm11611	ENSMUST00000134289	sense_intronic		11	-1	97521895	1326
ENSMUSG00000100502	lincRNA	Gm28286	ENSMUST00000188704	lincRNA		1	-1	154034301	586
ENSMUSG00000051451	protein_coding	Crebzf	ENSMUST00000207252	nonsense_mediated_decay		7	1	90443887	873
ENSMUSG00000051451	protein_coding	Crebzf	ENSMUST00000209102	processed_transcript		7	1	90444183	789
ENSMUSG00000031556	protein_coding	Tm2d2	ENSMUST00000033961	protein_coding	principal1	8	1	25017211	1281
ENSMUSG00000056328	protein_coding	Myh1	ENSMUST00000129018	protein_coding		11	1	67200138	631
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000176895	retained_intron		17	1	31564759	1855
ENSMUSG00000001323	protein_coding	Srr	ENSMUST00000135587	retained_intron		11	-1	74925703	1163
ENSMUSG00000051451	protein_coding	Crebzf	ENSMUST00000146291	processed_transcript		7	1	90444703	701
ENSMUSG00000025478	protein_coding	Dpysl4	ENSMUST00000154273	retained_intron		7	1	139086027	4196
ENSMUSG00000001323	protein_coding	Srr	ENSMUST00000147817	retained_intron		11	-1	74925675	1276
ENSMUSG00000115808	processed_pseudogene	Gm18949	ENSMUST00000226939	processed_pseudogene		15	-1	34269829	1199
ENSMUSG00000033565	protein_coding	Rbfox2	ENSMUST00000166610	protein_coding	alternative2	15	-1	77153812	6573
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000237248	protein_coding	alternative1	17	1	31564807	2014
ENSMUSG00000025478	protein_coding	Dpysl4	ENSMUST00000122844	retained_intron		7	1	139086028	3156
ENSMUSG00000087279	protein_coding	4930544D05Rik	ENSMUST00000180052	protein_coding	alternative2	11	1	70615848	755
ENSMUSG00000091813	protein_coding	Ces2h	ENSMUST00000172032	protein_coding	principal1	8	1	105000853	2445
ENSMUSG00000056328	protein_coding	Myh1	ENSMUST00000075734	protein_coding	principal1	11	1	67200404	6012
ENSMUSG00000001323	protein_coding	Srr	ENSMUST00000138612	protein_coding		11	-1	74925658	625
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000235869	protein_coding		17	1	31564816	426
ENSMUSG00000025478	protein_coding	Dpysl4	ENSMUST00000145499	protein_coding		7	1	139088365	654
ENSMUSG00000117041	processed_pseudogene	Gm46574	ENSMUST00000233844	processed_pseudogene		17	-1	51484721	430
ENSMUSG00000031556	protein_coding	Tm2d2	ENSMUST00000210758	nonsense_mediated_decay		8	1	25017259	1752
ENSMUSG00000055835	protein_coding	Zfp1	ENSMUST00000212072	protein_coding		8	1	111643401	1930
ENSMUSG00000025478	protein_coding	Dpysl4	ENSMUST00000121184	protein_coding		7	1	139089247	2727
ENSMUSG00000087279	protein_coding	4930544D05Rik	ENSMUST00000125387	retained_intron		11	1	70615894	797
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000175806	protein_coding	principal2	17	1	31564862	2170
ENSMUSG00000117181	lincRNA	Gm31143	ENSMUST00000233527	lincRNA		17	-1	51534858	429
ENSMUSG00000099340	sense_intronic	Gm29540	ENSMUST00000188207	sense_intronic		13	-1	91374294	337
ENSMUSG00000031556	protein_coding	Tm2d2	ENSMUST00000210536	protein_coding		8	1	25017307	727
ENSMUSG00000001323	protein_coding	Srr	ENSMUST00000065211	protein_coding	principal1	11	-1	74925798	3699
ENSMUSG00000087279	protein_coding	4930544D05Rik	ENSMUST00000135865	nonsense_mediated_decay		11	1	70615897	628
ENSMUSG00000085738	processed_pseudogene	Gm12335	ENSMUST00000119738	processed_pseudogene		11	-1	75066762	327
ENSMUSG00000035152	protein_coding	Ap2b1	ENSMUST00000176944	protein_coding		11	1	83299024	651
ENSMUSG00000097182	lincRNA	A830009L08Rik	ENSMUST00000181054	lincRNA		13	-1	91388085	2807
ENSMUSG00000110549	unprocessed_pseudogene	Gm45725	ENSMUST00000212962	unprocessed_pseudogene		8	1	105045166	337
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000235401	nonsense_mediated_decay		17	1	31564865	1422
ENSMUSG00000085765	antisense	Gm12333	ENSMUST00000155508	antisense		11	-1	75039348	2669
ENSMUSG00000027710	protein_coding	Acad9	ENSMUST00000198987	retained_intron		3	1	36066072	2905
ENSMUSG00000087279	protein_coding	4930544D05Rik	ENSMUST00000144960	protein_coding	principal2	11	1	70615910	624
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000176701	protein_coding	principal2	17	1	31583544	1778
ENSMUSG00000109491	antisense	Gm15396	ENSMUST00000209101	antisense		7	-1	44590624	1089
ENSMUSG00000027710	protein_coding	Acad9	ENSMUST00000197344	retained_intron		3	1	36072179	2062
ENSMUSG00000027710	protein_coding	Acad9	ENSMUST00000196535	retained_intron		3	1	36076769	688
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000237887	nonsense_mediated_decay		17	1	31588477	304
ENSMUSG00000027710	protein_coding	Acad9	ENSMUST00000197588	nonsense_mediated_decay		3	1	36078452	701
ENSMUSG00000079942	processed_pseudogene	Rpl28-ps3	ENSMUST00000116058	processed_pseudogene		4	-1	126070259	393
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000186617	protein_coding		1	-1	133025338	4694
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000236493	protein_coding		17	1	31591723	1347
ENSMUSG00000078486	protein_coding	Perm1	ENSMUST00000105572	protein_coding	principal1	4	1	156215868	3901
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000187244	processed_transcript		1	-1	132972713	2054
ENSMUSG00000010175	protein_coding	Prox1	ENSMUST00000175916	protein_coding	principal1	1	-1	190170714	7913
ENSMUSG00000027710	protein_coding	Acad9	ENSMUST00000196395	retained_intron		3	1	36080146	533
ENSMUSG00000055835	protein_coding	Zfp1	ENSMUST00000212206	nonsense_mediated_decay		8	1	111643480	1636
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000237038	protein_coding		17	1	31591727	1242
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000110457	protein_coding	principal1	15	1	25622525	8125
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000237748	protein_coding		17	1	31591728	1238
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000235255	protein_coding		17	1	31591728	1156
ENSMUSG00000027710	protein_coding	Acad9	ENSMUST00000195896	retained_intron		3	1	36080221	1853
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000188090	protein_coding	principal3	1	-1	133025416	7105
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000175812	retained_intron		17	1	31594821	745
ENSMUSG00000010175	protein_coding	Prox1	ENSMUST00000010319	protein_coding	principal1	1	-1	190169399	3285
ENSMUSG00000027710	protein_coding	Acad9	ENSMUST00000198050	retained_intron		3	1	36089234	740
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000137601	protein_coding		15	1	25622543	2826
ENSMUSG00000006705	protein_coding	Pknox1	ENSMUST00000176513	retained_intron		17	1	31602738	523
ENSMUSG00000027710	protein_coding	Acad9	ENSMUST00000199193	retained_intron		3	1	36089837	860
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000143998	retained_intron		6	1	113077365	2180
ENSMUSG00000031583	protein_coding	Wrn	ENSMUST00000033990	protein_coding	principal1	8	-1	33385472	5019
ENSMUSG00000025002	protein_coding	Cyp2c55	ENSMUST00000025966	protein_coding	principal1	19	1	39007019	1995
ENSMUSG00000117858	TEC	Gm50108	ENSMUST00000237494	TEC		17	1	31563170	563
ENSMUSG00000105055	antisense	Gm43079	ENSMUST00000199794	antisense		3	1	36088859	559
ENSMUSG00000055835	protein_coding	Zfp1	ENSMUST00000077791	protein_coding	principal1	8	1	111643506	1811
ENSMUSG00000010175	protein_coding	Prox1	ENSMUST00000177288	protein_coding	principal1	1	-1	190170680	3144
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000127486	retained_intron		15	1	25622549	970
ENSMUSG00000055835	protein_coding	Zfp1	ENSMUST00000211926	protein_coding		8	1	111643537	1409
ENSMUSG00000118239	sense_intronic	Gm50107	ENSMUST00000236000	sense_intronic		17	1	31567163	1692
ENSMUSG00000031583	protein_coding	Wrn	ENSMUST00000211498	protein_coding		8	-1	33330550	4856
ENSMUSG00000081611	processed_pseudogene	Gm13651	ENSMUST00000119086	processed_pseudogene		2	1	77291331	1110
ENSMUSG00000089667	processed_pseudogene	Gm15914	ENSMUST00000161922	processed_pseudogene		10	-1	112101548	309
ENSMUSG00000040540	processed_pseudogene	Ctdsp2-ps	ENSMUST00000075147	processed_pseudogene		10	1	130412499	811
ENSMUSG00000079045	antisense	Prox1os	ENSMUST00000110279	antisense		1	1	190170296	828
ENSMUSG00000085277	lincRNA	Gm13943	ENSMUST00000144043	lincRNA		2	1	77314751	343
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000067429	protein_coding	principal3	1	-1	133025348	3490
ENSMUSG00000057654	protein_coding	Olfr328	ENSMUST00000216725	protein_coding	principal1	11	-1	58555617	2904
ENSMUSG00000082006	processed_pseudogene	Gm13649	ENSMUST00000122325	processed_pseudogene		2	1	77335359	606
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000130517	processed_transcript		15	1	25674510	641
ENSMUSG00000031583	protein_coding	Wrn	ENSMUST00000209293	retained_intron		8	-1	33385508	1921
ENSMUSG00000099404	antisense	Gm28172	ENSMUST00000189880	antisense		1	1	190168670	506
ENSMUSG00000057654	protein_coding	Olfr328	ENSMUST00000215717	protein_coding	principal1	11	-1	58555617	2793
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000126076	retained_intron		15	1	25713871	599
ENSMUSG00000022257	protein_coding	Laptm4b	ENSMUST00000022867	protein_coding	principal1	15	1	34238028	1902
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000135981	protein_coding		15	1	25742409	727
ENSMUSG00000021186	protein_coding	Fbln5	ENSMUST00000021603	protein_coding	principal1	12	-1	101819055	5829
ENSMUSG00000031583	protein_coding	Wrn	ENSMUST00000033991	protein_coding	principal1	8	-1	33385527	6262
ENSMUSG00000037638	protein_coding	Zbtb42	ENSMUST00000174780	protein_coding		12	1	112678828	3160
ENSMUSG00000057654	protein_coding	Olfr328	ENSMUST00000108824	protein_coding	principal1	11	-1	58555636	1199
ENSMUSG00000021186	protein_coding	Fbln5	ENSMUST00000222587	protein_coding		12	-1	101818468	2371
ENSMUSG00000057654	protein_coding	Olfr328	ENSMUST00000073933	protein_coding	principal1	11	-1	58552237	933
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000022882	protein_coding		15	1	25752910	5880
ENSMUSG00000022257	protein_coding	Laptm4b	ENSMUST00000226437	nonsense_mediated_decay		15	1	34238149	1662
ENSMUSG00000022257	protein_coding	Laptm4b	ENSMUST00000226627	protein_coding		15	1	34238167	634
ENSMUSG00000037638	protein_coding	Zbtb42	ENSMUST00000169593	protein_coding	principal1	12	1	112678840	3478
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000135173	protein_coding		15	1	25752979	881
ENSMUSG00000078185	protein_coding	Chml	ENSMUST00000104984	protein_coding	principal1	1	-1	175692630	6905
ENSMUSG00000021186	protein_coding	Fbln5	ENSMUST00000221373	retained_intron		12	-1	101818959	1794
ENSMUSG00000038335	protein_coding	Tsr1	ENSMUST00000128230	nonsense_mediated_decay		11	1	74898114	2336
ENSMUSG00000067148	protein_coding	Polr1c	ENSMUST00000087026	protein_coding	principal1	17	-1	46248054	1314
ENSMUSG00000021715	protein_coding	Cwc27	ENSMUST00000022228	protein_coding	principal1	13	-1	104816953	2071
ENSMUSG00000022257	protein_coding	Laptm4b	ENSMUST00000228547	protein_coding		15	1	34273260	474
ENSMUSG00000078185	protein_coding	Chml	ENSMUST00000209720	protein_coding		1	-1	175692630	6905
ENSMUSG00000038335	protein_coding	Tsr1	ENSMUST00000144019	retained_intron		11	1	74901713	540
ENSMUSG00000078185	protein_coding	Chml	ENSMUST00000210367	protein_coding		1	-1	175692901	1324
ENSMUSG00000037638	protein_coding	Zbtb42	ENSMUST00000173942	protein_coding		12	1	112678878	485
ENSMUSG00000034768	protein_coding	Asb16	ENSMUST00000036467	protein_coding	principal1	11	1	102268743	2843
ENSMUSG00000067148	protein_coding	Polr1c	ENSMUST00000124655	protein_coding		17	-1	46246573	829
ENSMUSG00000078185	protein_coding	Chml	ENSMUST00000211489	protein_coding		1	-1	175692630	575
ENSMUSG00000078185	protein_coding	Chml	ENSMUST00000211207	protein_coding	principal1	1	-1	175688353	1866
ENSMUSG00000021715	protein_coding	Cwc27	ENSMUST00000141495	processed_transcript		13	-1	104792615	588
ENSMUSG00000086232	transcribed_unprocessed_pseudogene	Gm7546	ENSMUST00000146119	processed_transcript		7	-1	65635913	966
ENSMUSG00000024747	protein_coding	Aldh1a7	ENSMUST00000025656	protein_coding	principal1	19	-1	20727562	2066
ENSMUSG00000086232	transcribed_unprocessed_pseudogene	Gm7546	ENSMUST00000211354	transcribed_unprocessed_pseudogene		7	-1	65635786	275
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000131834	protein_coding		15	1	25758765	463
ENSMUSG00000021715	protein_coding	Cwc27	ENSMUST00000147514	processed_transcript		13	-1	104792650	451
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000124966	protein_coding		15	1	25758785	748
ENSMUSG00000021715	protein_coding	Cwc27	ENSMUST00000154165	protein_coding		13	-1	104817142	353
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000151360	protein_coding		15	1	25768556	376
ENSMUSG00000117802	unprocessed_pseudogene	Gm18929	ENSMUST00000235699	unprocessed_pseudogene		18	1	57334305	2144
ENSMUSG00000020214	protein_coding	Glipr1l2	ENSMUST00000148897	protein_coding	alternative2	10	1	112083354	1117
ENSMUSG00000081565	processed_pseudogene	Rps12-ps5	ENSMUST00000118272	processed_pseudogene		7	1	30263263	389
ENSMUSG00000084860	antisense	2610204G07Rik	ENSMUST00000131215	antisense		13	1	104684931	992
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000191212	nonsense_mediated_decay		1	-1	133025357	2799
ENSMUSG00000067148	protein_coding	Polr1c	ENSMUST00000152583	retained_intron		17	-1	46247932	870
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000125667	protein_coding		15	1	25773987	1030
ENSMUSG00000087044	lincRNA	1700042G15Rik	ENSMUST00000137606	lincRNA		4	-1	57364273	274
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000185398	nonsense_mediated_decay		1	-1	133025354	2010
ENSMUSG00000013928	protein_coding	Thap8	ENSMUST00000108187	protein_coding	principal5	7	1	30280094	1184
ENSMUSG00000022272	protein_coding	Myo10	ENSMUST00000145587	retained_intron		15	1	25780190	618
ENSMUSG00000078532	protein_coding	Nkain1	ENSMUST00000180884	nonsense_mediated_decay		4	-1	130573966	1028
ENSMUSG00000013928	protein_coding	Thap8	ENSMUST00000208866	retained_intron		7	1	30280556	1340
ENSMUSG00000086662	lincRNA	BC046251	ENSMUST00000154632	lincRNA		7	1	65582070	3653
ENSMUSG00000087044	lincRNA	1700042G15Rik	ENSMUST00000152001	lincRNA		4	-1	57364292	583
ENSMUSG00000013928	protein_coding	Thap8	ENSMUST00000014072	protein_coding	alternative2	7	1	30280094	1182
ENSMUSG00000067148	protein_coding	Polr1c	ENSMUST00000142706	protein_coding		17	-1	46247968	771
ENSMUSG00000087044	lincRNA	1700042G15Rik	ENSMUST00000143574	lincRNA		4	-1	57364252	488
ENSMUSG00000067148	protein_coding	Polr1c	ENSMUST00000173349	protein_coding		17	-1	46247968	516
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000067398	protein_coding	alternative1	1	-1	133025356	1914
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000075922	protein_coding	alternative2	8	1	107293559	4619
ENSMUSG00000026525	protein_coding	Opn3	ENSMUST00000027809	protein_coding	principal1	1	-1	175692776	1913
ENSMUSG00000002204	protein_coding	Napsa	ENSMUST00000002274	protein_coding	principal1	7	1	44572380	1560
ENSMUSG00000067148	protein_coding	Polr1c	ENSMUST00000173232	nonsense_mediated_decay		17	-1	46247968	432
ENSMUSG00000024530	protein_coding	Prelid3a	ENSMUST00000025411	protein_coding	principal1	18	1	67464866	1404
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000151582	retained_intron		8	1	107293470	5152
ENSMUSG00000027227	protein_coding	Sord	ENSMUST00000110551	protein_coding	principal1	2	1	122234749	2352
ENSMUSG00000107006	processed_pseudogene	Gm43105	ENSMUST00000202987	processed_pseudogene		5	-1	34307176	459
ENSMUSG00000067148	protein_coding	Polr1c	ENSMUST00000174392	retained_intron		17	-1	46247967	740
ENSMUSG00000020214	protein_coding	Glipr1l2	ENSMUST00000020434	protein_coding	principal3	10	1	112083354	1879
ENSMUSG00000078532	protein_coding	Nkain1	ENSMUST00000105993	protein_coding	principal1	4	-1	130574173	1202
ENSMUSG00000067148	protein_coding	Polr1c	ENSMUST00000124126	retained_intron		17	-1	46247968	576
ENSMUSG00000002204	protein_coding	Napsa	ENSMUST00000153124	retained_intron		7	1	44572432	1487
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000190312	processed_transcript		1	-1	133018858	587
ENSMUSG00000090162	processed_pseudogene	Gm6808	ENSMUST00000162341	processed_pseudogene		10	-1	112090473	807
ENSMUSG00000006216	protein_coding	Clcnkb	ENSMUST00000006378	protein_coding	principal1	4	-1	141416014	2370
ENSMUSG00000002204	protein_coding	Napsa	ENSMUST00000207543	retained_intron		7	1	44580938	525
ENSMUSG00000024530	protein_coding	Prelid3a	ENSMUST00000235492	retained_intron		18	1	67464884	799
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000189596	retained_intron		1	-1	133004325	762
ENSMUSG00000083982	processed_pseudogene	Gm14650	ENSMUST00000120400	processed_pseudogene		X	-1	58631288	889
ENSMUSG00000026581	protein_coding	Sell	ENSMUST00000192047	protein_coding		1	1	164061982	5703
ENSMUSG00000078532	protein_coding	Nkain1	ENSMUST00000180498	processed_transcript		4	-1	130557988	318
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000186513	retained_intron		1	-1	133001421	1950
ENSMUSG00000105419	TEC	Gm43205	ENSMUST00000198622	TEC		3	1	36097177	1968
ENSMUSG00000109572	protein_coding	Cfap99	ENSMUST00000207754	protein_coding	principal1	5	1	34288600	2123
ENSMUSG00000002204	protein_coding	Napsa	ENSMUST00000208514	nonsense_mediated_decay		7	1	44582354	435
ENSMUSG00000081373	processed_pseudogene	Gm16436	ENSMUST00000121510	processed_pseudogene		X	-1	58632738	1607
ENSMUSG00000024530	protein_coding	Prelid3a	ENSMUST00000237312	retained_intron		18	1	67464891	1941
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000187529	retained_intron		1	-1	133004128	612
ENSMUSG00000112334	processed_pseudogene	Gm48047	ENSMUST00000218586	processed_pseudogene		10	-1	112132581	238
ENSMUSG00000006216	protein_coding	Clcnkb	ENSMUST00000105788	protein_coding		4	-1	141416014	2490
ENSMUSG00000106531	processed_pseudogene	Gm43233	ENSMUST00000200491	processed_pseudogene		3	1	107781856	616
ENSMUSG00000024530	protein_coding	Prelid3a	ENSMUST00000235414	protein_coding		18	1	67472872	753
ENSMUSG00000107287	lincRNA	Gm43458	ENSMUST00000200791	lincRNA		5	-1	34327530	462
ENSMUSG00000002204	protein_coding	Napsa	ENSMUST00000207302	retained_intron		7	1	44584815	603
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000185418	retained_intron		1	-1	133025330	496
ENSMUSG00000105667	processed_pseudogene	Gm3945	ENSMUST00000196637	processed_pseudogene		14	1	54334217	683
ENSMUSG00000006216	protein_coding	Clcnkb	ENSMUST00000145725	processed_transcript		4	-1	141415961	399
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000190807	protein_coding		1	-1	133030561	467
ENSMUSG00000095042	processed_pseudogene	Gm12537	ENSMUST00000119266	processed_pseudogene		4	-1	57371954	1002
ENSMUSG00000054387	protein_coding	Mdm4	ENSMUST00000186645	retained_intron		1	-1	133025338	1275
ENSMUSG00000115586	TEC	Gm48918	ENSMUST00000227649	TEC		15	-1	24099207	3243
ENSMUSG00000112611	protein_coding	Glipr1l3	ENSMUST00000220085	protein_coding	principal1	10	-1	112160327	892
ENSMUSG00000092048	protein_coding	Vmn2r85	ENSMUST00000171811	protein_coding	principal1	10	-1	130429703	6841
ENSMUSG00000029433	protein_coding	Diablo	ENSMUST00000125652	nonsense_mediated_decay		5	-1	123524143	3386
ENSMUSG00000100228	processed_pseudogene	Gm29257	ENSMUST00000186115	processed_pseudogene		1	1	133025801	639
ENSMUSG00000115341	processed_pseudogene	Gm48919	ENSMUST00000227502	processed_pseudogene		15	-1	24130185	365
ENSMUSG00000081540	processed_pseudogene	Gm12538	ENSMUST00000120064	processed_pseudogene		4	-1	57414196	486
ENSMUSG00000084301	processed_pseudogene	Gm7856	ENSMUST00000117514	processed_pseudogene		16	-1	91514633	1493
ENSMUSG00000029433	protein_coding	Diablo	ENSMUST00000139398	nonsense_mediated_decay		5	-1	123524142	1663
ENSMUSG00000029861	protein_coding	Fam131b	ENSMUST00000031891	protein_coding		6	-1	42324640	4065
ENSMUSG00000042616	protein_coding	Oscp1	ENSMUST00000035497	protein_coding	principal2	4	1	126058565	5013
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000151114	protein_coding	principal3	8	1	107293509	4982
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000125721	protein_coding	alternative2	8	1	107293559	5899
ENSMUSG00000004891	protein_coding	Nes	ENSMUST00000159830	retained_intron		3	1	87971078	1311
ENSMUSG00000042616	protein_coding	Oscp1	ENSMUST00000143712	protein_coding	alternative2	4	1	126058604	1473
ENSMUSG00000027966	protein_coding	Col11a1	ENSMUST00000123619	protein_coding		3	1	114030540	2064
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000149972	retained_intron		8	1	107293509	3743
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000154474	nonsense_mediated_decay		8	1	107293470	6099
ENSMUSG00000042616	protein_coding	Oscp1	ENSMUST00000153138	processed_transcript		4	1	126082928	402
ENSMUSG00000026581	protein_coding	Sell	ENSMUST00000027871	protein_coding	principal2	1	1	164062085	2199
ENSMUSG00000033737	protein_coding	Fndc3c1	ENSMUST00000039447	protein_coding	principal1	X	-1	106485274	4859
ENSMUSG00000031957	protein_coding	Ctrb1	ENSMUST00000034435	protein_coding	principal1	8	-1	111691010	878
ENSMUSG00000102951	TEC	Gm37216	ENSMUST00000193817	TEC		18	-1	84376146	3478
ENSMUSG00000042616	protein_coding	Oscp1	ENSMUST00000129968	retained_intron		4	1	126087679	429
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000126397	retained_intron		8	1	107338508	2325
ENSMUSG00000092162	protein_coding	Vmn2r86	ENSMUST00000170257	protein_coding	principal1	10	-1	130456050	7340
ENSMUSG00000118385	antisense	Gm50311	ENSMUST00000238064	antisense		18	1	84202924	696
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000148006	retained_intron		8	1	107338508	1643
ENSMUSG00000026581	protein_coding	Sell	ENSMUST00000097491	protein_coding	alternative2	1	1	164062189	1215
ENSMUSG00000033883	protein_coding	Zfp267	ENSMUST00000197653	protein_coding	principal1	3	1	36151017	6689
ENSMUSG00000033737	protein_coding	Fndc3c1	ENSMUST00000137507	retained_intron		X	-1	106432008	932
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000147588	protein_coding		8	1	107355820	5481
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000126333	nonsense_mediated_decay		8	1	107344786	732
ENSMUSG00000033883	protein_coding	Zfp267	ENSMUST00000205077	protein_coding		3	1	36151162	315
ENSMUSG00000026581	protein_coding	Sell	ENSMUST00000195358	protein_coding		1	1	164068962	613
ENSMUSG00000048410	protein_coding	Zfp407	ENSMUST00000125450	protein_coding		18	-1	84558425	541
ENSMUSG00000029433	protein_coding	Diablo	ENSMUST00000111587	protein_coding	principal1	5	-1	123524176	1576
ENSMUSG00000028683	protein_coding	Eif2b3	ENSMUST00000106448	protein_coding	principal1	4	1	117019402	1555
ENSMUSG00000033737	protein_coding	Fndc3c1	ENSMUST00000127796	processed_transcript		X	-1	106433514	570
ENSMUSG00000033883	protein_coding	Zfp267	ENSMUST00000165956	protein_coding		3	1	36159522	6503
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000144100	protein_coding		8	1	107338913	432
ENSMUSG00000020022	protein_coding	Ndufa12	ENSMUST00000135292	nonsense_mediated_decay		10	1	94198720	1386
ENSMUSG00000070311	protein_coding	Olfr894	ENSMUST00000212992	protein_coding	alternative2	9	1	38218055	3234
ENSMUSG00000033737	protein_coding	Fndc3c1	ENSMUST00000151745	retained_intron		X	-1	106434843	861
ENSMUSG00000028683	protein_coding	Eif2b3	ENSMUST00000070610	protein_coding		4	1	117022155	1369
ENSMUSG00000070311	protein_coding	Olfr894	ENSMUST00000093866	protein_coding	principal2	9	1	38218818	949
ENSMUSG00000033737	protein_coding	Fndc3c1	ENSMUST00000149331	protein_coding		X	-1	106485022	397
ENSMUSG00000029861	protein_coding	Fam131b	ENSMUST00000143278	protein_coding	principal3	6	-1	42324643	4104
ENSMUSG00000029433	protein_coding	Diablo	ENSMUST00000200247	protein_coding		5	-1	123524112	748
ENSMUSG00000028683	protein_coding	Eif2b3	ENSMUST00000155181	processed_transcript		4	1	117067463	2230
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000077440	protein_coding	alternative2	8	1	107338807	12773
ENSMUSG00000033737	protein_coding	Fndc3c1	ENSMUST00000138724	protein_coding		X	-1	106484897	624
ENSMUSG00000032803	protein_coding	Cdv3	ENSMUST00000035484	protein_coding	principal3	9	-1	103365840	3387
ENSMUSG00000094778	protein_coding	Olfr143	ENSMUST00000213129	protein_coding	alternative2	9	1	38252774	3449
ENSMUSG00000003847	protein_coding	Nfat5	ENSMUST00000169453	protein_coding	principal3	8	1	107293470	13380
ENSMUSG00000044122	protein_coding	Proca1	ENSMUST00000078099	protein_coding	principal2	11	1	78193392	1254
ENSMUSG00000020022	protein_coding	Ndufa12	ENSMUST00000020209	protein_coding	principal1	10	1	94198955	1110
ENSMUSG00000028683	protein_coding	Eif2b3	ENSMUST00000135121	processed_transcript		4	1	117044476	462
ENSMUSG00000033737	protein_coding	Fndc3c1	ENSMUST00000140707	protein_coding		X	-1	106485401	443
ENSMUSG00000094778	protein_coding	Olfr143	ENSMUST00000093865	protein_coding	principal2	9	1	38253419	942
ENSMUSG00000044122	protein_coding	Proca1	ENSMUST00000239287	processed_transcript		11	1	78194065	1213
ENSMUSG00000044106	protein_coding	Olfr868	ENSMUST00000212767	protein_coding	principal1	9	1	20098626	4196
ENSMUSG00000048410	protein_coding	Zfp407	ENSMUST00000125763	protein_coding	principal1	18	-1	84589504	7909
ENSMUSG00000029861	protein_coding	Fam131b	ENSMUST00000095974	protein_coding	alternative2	6	-1	42324592	3992
ENSMUSG00000028683	protein_coding	Eif2b3	ENSMUST00000151760	processed_transcript		4	1	117066471	661
ENSMUSG00000029433	protein_coding	Diablo	ENSMUST00000145152	protein_coding		5	-1	123524136	2588
ENSMUSG00000020022	protein_coding	Ndufa12	ENSMUST00000125379	retained_intron		10	1	94199037	428
ENSMUSG00000028683	protein_coding	Eif2b3	ENSMUST00000129587	processed_transcript		4	1	117081281	541
ENSMUSG00000044106	protein_coding	Olfr868	ENSMUST00000212999	protein_coding	principal1	9	1	20098626	4233
ENSMUSG00000044106	protein_coding	Olfr868	ENSMUST00000215566	processed_transcript		9	1	20098626	3030
ENSMUSG00000029433	protein_coding	Diablo	ENSMUST00000111586	protein_coding		5	-1	123524133	719
ENSMUSG00000096427	protein_coding	Olfr895	ENSMUST00000212156	protein_coding	alternative2	9	1	38267851	1558
ENSMUSG00000048410	protein_coding	Zfp407	ENSMUST00000143597	processed_transcript		18	-1	84412420	2126
ENSMUSG00000020022	protein_coding	Ndufa12	ENSMUST00000179990	protein_coding		10	1	94199004	566
ENSMUSG00000044122	protein_coding	Proca1	ENSMUST00000060539	protein_coding	alternative2	11	1	78194704	960
ENSMUSG00000028683	protein_coding	Eif2b3	ENSMUST00000106447	protein_coding		4	1	117019408	3754
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000031823	protein_coding		6	1	58831861	3596
ENSMUSG00000048410	protein_coding	Zfp407	ENSMUST00000182849	retained_intron		18	-1	84434935	4949
ENSMUSG00000004891	protein_coding	Nes	ENSMUST00000090973	protein_coding	principal2	3	1	87971093	6126
ENSMUSG00000029433	protein_coding	Diablo	ENSMUST00000031385	protein_coding		5	-1	123524133	681
ENSMUSG00000096427	protein_coding	Olfr895	ENSMUST00000093864	protein_coding	principal2	9	1	38268515	951
ENSMUSG00000115528	processed_pseudogene	Gm8408	ENSMUST00000228146	processed_pseudogene		15	-1	24205570	1687
ENSMUSG00000048410	protein_coding	Zfp407	ENSMUST00000156181	processed_transcript		18	-1	84558375	428
ENSMUSG00000048410	protein_coding	Zfp407	ENSMUST00000182297	processed_transcript		18	-1	84589725	364
ENSMUSG00000044122	protein_coding	Proca1	ENSMUST00000108317	protein_coding	alternative2	11	1	78194734	1359
ENSMUSG00000044122	protein_coding	Proca1	ENSMUST00000124772	retained_intron		11	1	78194746	1545
ENSMUSG00000029433	protein_coding	Diablo	ENSMUST00000125047	retained_intron		5	-1	123523491	499
ENSMUSG00000020766	protein_coding	Galk1	ENSMUST00000021114	protein_coding	principal1	11	-1	116012719	1406
ENSMUSG00000115047	processed_transcript	4930540I17Rik	ENSMUST00000226891	retained_intron		15	-1	24375627	482
ENSMUSG00000029433	protein_coding	Diablo	ENSMUST00000149334	retained_intron		5	-1	123520754	743
ENSMUSG00000004891	protein_coding	Nes	ENSMUST00000160694	protein_coding	alternative2	3	1	87971129	5958
ENSMUSG00000115079	processed_pseudogene	Gm36147	ENSMUST00000226175	processed_pseudogene		15	1	24357462	1453
ENSMUSG00000115198	lincRNA	Gm49729	ENSMUST00000228438	lincRNA		15	-1	24375675	1456
ENSMUSG00000082535	processed_pseudogene	Gm7860	ENSMUST00000121190	processed_pseudogene		16	-1	91540060	879
ENSMUSG00000032803	protein_coding	Cdv3	ENSMUST00000116517	protein_coding	alternative2	9	-1	103364897	3741
ENSMUSG00000073909	protein_coding	Olfr688	ENSMUST00000098155	protein_coding	principal1	7	1	105288095	966
ENSMUSG00000103898	TEC	Gm30238	ENSMUST00000195528	TEC		12	-1	112693588	2603
ENSMUSG00000074178	antisense	Gm10638	ENSMUST00000238340	antisense		8	1	86745453	3203
ENSMUSG00000074178	antisense	Gm10638	ENSMUST00000098532	antisense		8	1	86745699	905
ENSMUSG00000038156	protein_coding	Spon1	ENSMUST00000046687	protein_coding	principal1	7	1	113765998	6161
ENSMUSG00000032803	protein_coding	Cdv3	ENSMUST00000190226	protein_coding	alternative1	9	-1	103364979	3107
ENSMUSG00000111085	lincRNA	Gm7607	ENSMUST00000214920	lincRNA		9	1	14663022	518
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000041401	protein_coding	principal1	6	1	58833700	4731
ENSMUSG00000046585	protein_coding	Cfap58	ENSMUST00000238163	protein_coding		19	1	47937675	703
ENSMUSG00000038156	protein_coding	Spon1	ENSMUST00000084696	protein_coding		7	1	113766174	5201
ENSMUSG00000073907	protein_coding	Olfr689	ENSMUST00000215413	protein_coding	principal1	7	1	105311165	5819
ENSMUSG00000036840	protein_coding	Siah1a	ENSMUST00000045296	protein_coding	principal1	8	-1	86745934	1968
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000154290	retained_intron		6	1	58862829	418
ENSMUSG00000055912	protein_coding	Tmem150a	ENSMUST00000069695	protein_coding	principal1	6	1	72355447	1546
ENSMUSG00000032803	protein_coding	Cdv3	ENSMUST00000072249	protein_coding	alternative2	9	-1	103365538	3787
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000122908	processed_transcript		6	1	58871774	410
ENSMUSG00000073907	protein_coding	Olfr689	ENSMUST00000098153	protein_coding	principal1	7	1	105313982	1076
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000204196	processed_transcript		6	1	58874343	234
ENSMUSG00000026879	protein_coding	Gsn	ENSMUST00000201185	protein_coding	principal1	2	1	35256380	2607
ENSMUSG00000111814	protein_coding	Olfr896-ps1	ENSMUST00000214066	processed_transcript		9	1	38291125	2806
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000204629	protein_coding		6	1	58890095	722
ENSMUSG00000038335	protein_coding	Tsr1	ENSMUST00000045807	protein_coding	principal1	11	1	74898078	3389
ENSMUSG00000055912	protein_coding	Tmem150a	ENSMUST00000132243	protein_coding		6	1	72355447	1478
ENSMUSG00000082472	processed_pseudogene	Gm13501	ENSMUST00000118477	processed_pseudogene		2	-1	53398487	979
ENSMUSG00000032803	protein_coding	Cdv3	ENSMUST00000189875	protein_coding		9	-1	103365127	554
ENSMUSG00000094950	protein_coding	Vmn2r66	ENSMUST00000124773	protein_coding	principal2	7	-1	85012268	12083
ENSMUSG00000111814	protein_coding	Olfr896-ps1	ENSMUST00000215219	protein_coding	principal1	9	1	38291126	2878
ENSMUSG00000111814	protein_coding	Olfr896-ps1	ENSMUST00000216276	protein_coding	principal1	9	1	38291107	2921
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000205139	retained_intron		6	1	58901748	2762
ENSMUSG00000094950	protein_coding	Vmn2r66	ENSMUST00000233725	protein_coding	alternative2	7	-1	85012268	11995
ENSMUSG00000080716	processed_pseudogene	Gm13503	ENSMUST00000119017	processed_pseudogene		2	1	53551926	446
ENSMUSG00000055912	protein_coding	Tmem150a	ENSMUST00000206064	protein_coding		6	1	72355474	540
ENSMUSG00000094950	protein_coding	Vmn2r66	ENSMUST00000233111	nonsense_mediated_decay		7	-1	85012268	12033
ENSMUSG00000032803	protein_coding	Cdv3	ENSMUST00000189896	protein_coding	alternative2	9	-1	103365619	1023
ENSMUSG00000038335	protein_coding	Tsr1	ENSMUST00000130910	retained_intron		11	1	74905211	769
ENSMUSG00000094950	protein_coding	Vmn2r66	ENSMUST00000233739	protein_coding	alternative2	7	-1	85012268	12104
ENSMUSG00000029804	protein_coding	Herc3	ENSMUST00000131132	processed_transcript		6	1	58907262	636
ENSMUSG00000110881	polymorphic_pseudogene	Olfr897-ps1	ENSMUST00000213589	polymorphic_pseudogene	principal1	9	1	38308797	935
ENSMUSG00000094950	protein_coding	Vmn2r66	ENSMUST00000232837	protein_coding	alternative2	7	-1	85012268	12016
ENSMUSG00000083287	processed_pseudogene	Gm13502	ENSMUST00000121574	processed_pseudogene		2	-1	53696804	684
ENSMUSG00000055912	protein_coding	Tmem150a	ENSMUST00000206821	processed_transcript		6	1	72356129	551
ENSMUSG00000032803	protein_coding	Cdv3	ENSMUST00000190127	retained_intron		9	-1	103364980	3377
ENSMUSG00000029596	protein_coding	Sdsl	ENSMUST00000052258	protein_coding	principal1	5	-1	120472763	1225
ENSMUSG00000101419	processed_pseudogene	Gm29600	ENSMUST00000188687	processed_pseudogene		9	1	103409169	377
ENSMUSG00000055912	protein_coding	Tmem150a	ENSMUST00000206531	protein_coding		6	1	72356226	544
ENSMUSG00000055430	protein_coding	Nap1l5	ENSMUST00000059539	protein_coding	principal1	6	-1	58907076	1844
ENSMUSG00000058270	protein_coding	Olfr25	ENSMUST00000214155	protein_coding	alternative2	9	1	38329060	6479
ENSMUSG00000038335	protein_coding	Tsr1	ENSMUST00000155785	retained_intron		11	1	74898098	1369
ENSMUSG00000058270	protein_coding	Olfr25	ENSMUST00000212354	protein_coding	alternative2	9	1	38329198	1362
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000206319	retained_intron		6	-1	72362123	2410
ENSMUSG00000111399	lincRNA	Gm47328	ENSMUST00000216687	lincRNA		9	-1	103423200	670
ENSMUSG00000029596	protein_coding	Sdsl	ENSMUST00000031594	protein_coding	principal1	5	-1	120472810	1476
ENSMUSG00000075334	protein_coding	Rprm	ENSMUST00000100089	protein_coding	principal1	2	-1	54085552	1460
ENSMUSG00000058270	protein_coding	Olfr25	ENSMUST00000071449	protein_coding	principal2	9	1	38329492	1068
ENSMUSG00000055430	protein_coding	Nap1l5	ENSMUST00000205101	protein_coding		6	-1	58906673	630
ENSMUSG00000038335	protein_coding	Tsr1	ENSMUST00000155702	nonsense_mediated_decay		11	1	74898071	1549
ENSMUSG00000029596	protein_coding	Sdsl	ENSMUST00000132916	protein_coding		5	-1	120467360	438
ENSMUSG00000038335	protein_coding	Tsr1	ENSMUST00000153316	nonsense_mediated_decay		11	1	74903970	708
ENSMUSG00000026349	protein_coding	Ccnt2	ENSMUST00000027587	protein_coding	principal2	1	1	127774164	6738
ENSMUSG00000050666	protein_coding	Vstm4	ENSMUST00000053175	protein_coding	principal1	14	1	32856756	2745
ENSMUSG00000108235	processed_pseudogene	Gm44248	ENSMUST00000203079	processed_pseudogene		6	1	129848693	1549
ENSMUSG00000101295	antisense	Gm28180	ENSMUST00000189608	antisense		11	-1	74993494	722
ENSMUSG00000031652	protein_coding	N4bp1	ENSMUST00000209389	processed_transcript		8	-1	86844045	3593
ENSMUSG00000032298	protein_coding	Neil1	ENSMUST00000190245	protein_coding	principal1	9	-1	57148127	1693
ENSMUSG00000032298	protein_coding	Neil1	ENSMUST00000186410	protein_coding	principal1	9	-1	57148305	1601
ENSMUSG00000026349	protein_coding	Ccnt2	ENSMUST00000112570	protein_coding	alternative2	1	1	127774164	4511
ENSMUSG00000116875	processed_pseudogene	Morf4l1-ps1	ENSMUST00000231737	processed_pseudogene		16	1	24529394	969
ENSMUSG00000046585	protein_coding	Cfap58	ENSMUST00000066308	protein_coding	principal1	19	1	47937712	3353
ENSMUSG00000075122	protein_coding	Cd80	ENSMUST00000231716	protein_coding	principal1	16	1	38455561	3173
ENSMUSG00000023827	protein_coding	Agpat4	ENSMUST00000164143	protein_coding		17	1	12118704	799
ENSMUSG00000098236	processed_pseudogene	Gm7734	ENSMUST00000182832	processed_pseudogene		14	1	32897719	1011
ENSMUSG00000112712	processed_pseudogene	Gm18755	ENSMUST00000218030	processed_pseudogene		10	-1	130470609	1099
ENSMUSG00000032298	protein_coding	Neil1	ENSMUST00000034842	protein_coding	principal1	9	-1	57147034	1170
ENSMUSG00000021279	protein_coding	Cdc42bpb	ENSMUST00000221897	retained_intron		12	-1	111295316	1589
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000182709	protein_coding	principal1	5	1	34336289	3046
ENSMUSG00000075122	protein_coding	Cd80	ENSMUST00000099816	protein_coding	principal1	16	1	38458933	1701
ENSMUSG00000086348	lincRNA	1700017J07Rik	ENSMUST00000140241	lincRNA		2	1	168978268	473
ENSMUSG00000035329	protein_coding	Fbxo33	ENSMUST00000043204	protein_coding	principal1	12	-1	59219725	3688
ENSMUSG00000075122	protein_coding	Cd80	ENSMUST00000232409	protein_coding		16	1	38459118	748
ENSMUSG00000019578	protein_coding	Ubxn6	ENSMUST00000019722	protein_coding	principal1	17	-1	56075028	2949
ENSMUSG00000086658	lincRNA	Gm14260	ENSMUST00000125121	lincRNA		2	-1	168987373	260
ENSMUSG00000091511	protein_coding	Vmn2r87	ENSMUST00000164227	protein_coding	principal1	10	-1	130497396	3333
ENSMUSG00000028565	protein_coding	Nfia	ENSMUST00000075448	protein_coding	principal2	4	1	97777608	9526
ENSMUSG00000035329	protein_coding	Fbxo33	ENSMUST00000162855	protein_coding		12	-1	59204436	529
ENSMUSG00000112195	processed_pseudogene	Gm35405	ENSMUST00000218754	processed_pseudogene		10	-1	130535961	400
ENSMUSG00000052368	lincRNA	Gm9873	ENSMUST00000180562	lincRNA		2	1	169020025	1361
ENSMUSG00000099616	antisense	4932413F04Rik	ENSMUST00000190332	antisense		9	1	103557090	2765
ENSMUSG00000031652	protein_coding	N4bp1	ENSMUST00000034074	protein_coding	principal1	8	-1	86885258	6469
ENSMUSG00000052368	lincRNA	Gm9873	ENSMUST00000063891	lincRNA		2	1	169020270	1097
ENSMUSG00000112742	lincRNA	Gm31793	ENSMUST00000218557	lincRNA		10	1	130542347	415
ENSMUSG00000035329	protein_coding	Fbxo33	ENSMUST00000160204	retained_intron		12	-1	59205689	3401
ENSMUSG00000028565	protein_coding	Nfia	ENSMUST00000107062	protein_coding	alternative1	4	1	97777803	9239
ENSMUSG00000028565	protein_coding	Nfia	ENSMUST00000052018	protein_coding		4	1	97777819	9249
ENSMUSG00000086238	lincRNA	Gm14258	ENSMUST00000144607	lincRNA		2	1	169106453	2031
ENSMUSG00000035329	protein_coding	Fbxo33	ENSMUST00000161351	protein_coding		12	-1	59218801	641
ENSMUSG00000031652	protein_coding	N4bp1	ENSMUST00000210029	retained_intron		8	-1	86852420	3259
ENSMUSG00000028565	protein_coding	Nfia	ENSMUST00000107057	protein_coding		4	1	97777834	8913
ENSMUSG00000022685	protein_coding	Parn	ENSMUST00000058884	protein_coding	principal1	16	-1	13668170	2906
ENSMUSG00000096755	processed_pseudogene	Ftl1-ps2	ENSMUST00000169477	processed_pseudogene		10	-1	130592705	549
ENSMUSG00000028565	protein_coding	Nfia	ENSMUST00000148930	protein_coding		4	1	97880119	821
ENSMUSG00000082096	processed_pseudogene	Gm13505	ENSMUST00000121666	processed_pseudogene		2	1	54240569	817
ENSMUSG00000026349	protein_coding	Ccnt2	ENSMUST00000149760	retained_intron		1	1	127774164	1040
ENSMUSG00000022706	protein_coding	Mrpl40	ENSMUST00000023391	protein_coding	principal1	16	-1	18876862	1280
ENSMUSG00000019578	protein_coding	Ubxn6	ENSMUST00000132804	retained_intron		17	-1	56072232	3476
ENSMUSG00000075046	protein_coding	Duxf3	ENSMUST00000176875	protein_coding	principal1	10	-1	58232675	2025
ENSMUSG00000026349	protein_coding	Ccnt2	ENSMUST00000126850	retained_intron		1	1	127774164	4500
ENSMUSG00000075046	protein_coding	Duxf3	ENSMUST00000174056	protein_coding		10	-1	58232013	1486
ENSMUSG00000026349	protein_coding	Ccnt2	ENSMUST00000153359	processed_transcript		1	1	127796571	7640
ENSMUSG00000026879	protein_coding	Gsn	ENSMUST00000202990	protein_coding		2	1	35256384	1925
ENSMUSG00000023827	protein_coding	Agpat4	ENSMUST00000024594	protein_coding	principal1	17	1	12119284	1915
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000069595	protein_coding	alternative2	6	-1	72362393	1191
ENSMUSG00000026349	protein_coding	Ccnt2	ENSMUST00000125760	retained_intron		1	1	127774164	665
ENSMUSG00000029675	protein_coding	Eln	ENSMUST00000015138	protein_coding	principal1	5	-1	134747323	3853
ENSMUSG00000022706	protein_coding	Mrpl40	ENSMUST00000119273	protein_coding		16	-1	18876539	778
ENSMUSG00000109565	unprocessed_pseudogene	Gm6579	ENSMUST00000208224	unprocessed_pseudogene		7	-1	29799796	865
ENSMUSG00000026879	protein_coding	Gsn	ENSMUST00000202899	protein_coding		2	1	35256396	842
ENSMUSG00000053746	protein_coding	Ptrh1	ENSMUST00000066352	protein_coding	principal1	2	1	32775786	952
ENSMUSG00000028565	protein_coding	Nfia	ENSMUST00000133011	processed_transcript		4	1	97911033	1649
ENSMUSG00000022706	protein_coding	Mrpl40	ENSMUST00000232123	retained_intron		16	-1	18876609	675
ENSMUSG00000026349	protein_coding	Ccnt2	ENSMUST00000143513	retained_intron		1	1	127774164	1118
ENSMUSG00000023827	protein_coding	Agpat4	ENSMUST00000172259	processed_transcript		17	1	12119329	502
ENSMUSG00000019578	protein_coding	Ubxn6	ENSMUST00000151943	retained_intron		17	-1	56075017	2769
ENSMUSG00000026879	protein_coding	Gsn	ENSMUST00000142324	protein_coding		2	1	35256409	883
ENSMUSG00000053746	protein_coding	Ptrh1	ENSMUST00000192262	processed_transcript		2	1	32775816	344
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000182970	retained_intron		5	1	34336328	1205
ENSMUSG00000019578	protein_coding	Ubxn6	ENSMUST00000134441	retained_intron		17	-1	56069434	745
ENSMUSG00000028565	protein_coding	Nfia	ENSMUST00000092532	protein_coding		4	1	97777626	9382
ENSMUSG00000022685	protein_coding	Parn	ENSMUST00000231003	nonsense_mediated_decay		16	-1	13668138	2519
ENSMUSG00000075045	protein_coding	Gm4981	ENSMUST00000099726	protein_coding	principal1	10	-1	58236701	1854
ENSMUSG00000053746	protein_coding	Ptrh1	ENSMUST00000138214	retained_intron		2	1	32775865	908
ENSMUSG00000026879	protein_coding	Gsn	ENSMUST00000139867	protein_coding		2	1	35256449	646
ENSMUSG00000083595	processed_pseudogene	Gm9200	ENSMUST00000118513	processed_pseudogene		X	-1	106642734	1354
ENSMUSG00000022685	protein_coding	Parn	ENSMUST00000229042	nonsense_mediated_decay		16	-1	13668136	534
ENSMUSG00000083432	processed_pseudogene	Gm14878	ENSMUST00000118167	processed_pseudogene		X	1	106612101	293
ENSMUSG00000058400	protein_coding	Qrfpr	ENSMUST00000197447	protein_coding		3	-1	36222275	1690
ENSMUSG00000014543	protein_coding	Klra17	ENSMUST00000014687	protein_coding	principal1	6	-1	129876670	1190
ENSMUSG00000019578	protein_coding	Ubxn6	ENSMUST00000153947	processed_transcript		17	-1	56072440	831
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000030992	protein_coding	principal1	5	1	34336380	2895
ENSMUSG00000023827	protein_coding	Agpat4	ENSMUST00000167792	protein_coding		17	1	12133205	662
ENSMUSG00000019578	protein_coding	Ubxn6	ENSMUST00000146467	retained_intron		17	-1	56074848	1079
ENSMUSG00000027690	protein_coding	Slc2a2	ENSMUST00000029240	protein_coding	principal1	3	1	28697903	5569
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000181991	processed_transcript		5	1	34336390	491
ENSMUSG00000023827	protein_coding	Agpat4	ENSMUST00000170858	nonsense_mediated_decay		17	1	12151772	967
ENSMUSG00000022685	protein_coding	Parn	ENSMUST00000229526	retained_intron		16	-1	13668149	2274
ENSMUSG00000051504	protein_coding	Siglech	ENSMUST00000172988	nonsense_mediated_decay		7	1	55768178	829
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000181999	retained_intron		5	1	34336417	586
ENSMUSG00000022685	protein_coding	Parn	ENSMUST00000229251	retained_intron		16	-1	13667982	521
ENSMUSG00000023827	protein_coding	Agpat4	ENSMUST00000167905	retained_intron		17	1	12215125	695
ENSMUSG00000019578	protein_coding	Ubxn6	ENSMUST00000139371	protein_coding		17	-1	56074547	664
ENSMUSG00000026879	protein_coding	Gsn	ENSMUST00000028239	protein_coding		2	1	35282380	2653
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000182582	processed_transcript		5	1	34336419	371
ENSMUSG00000063911	processed_pseudogene	Tdgf1-ps2	ENSMUST00000074412	processed_pseudogene		17	1	12189921	505
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000069580	protein_coding	principal3	6	-1	72362432	1434
ENSMUSG00000020310	protein_coding	Madcam1	ENSMUST00000020554	protein_coding	principal2	10	1	79664559	1436
ENSMUSG00000115004	processed_pseudogene	Gm48920	ENSMUST00000226982	processed_pseudogene		15	-1	24605478	420
ENSMUSG00000014543	protein_coding	Klra17	ENSMUST00000122219	protein_coding	principal1	6	-1	129876672	1167
ENSMUSG00000082474	processed_pseudogene	Gm8213	ENSMUST00000118191	processed_pseudogene		6	-1	116195858	441
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000182772	retained_intron		5	1	34336424	928
ENSMUSG00000052821	protein_coding	Cysltr1	ENSMUST00000113480	protein_coding	principal1	X	-1	106603679	5142
ENSMUSG00000115048	processed_pseudogene	Gm48921	ENSMUST00000228158	processed_pseudogene		15	1	24650868	274
ENSMUSG00000027690	protein_coding	Slc2a2	ENSMUST00000163536	nonsense_mediated_decay		3	1	28698017	1447
ENSMUSG00000026879	protein_coding	Gsn	ENSMUST00000124323	retained_intron		2	1	35282513	646
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000183071	retained_intron		5	1	34336446	723
ENSMUSG00000052821	protein_coding	Cysltr1	ENSMUST00000064892	protein_coding	principal1	X	-1	106580861	1059
ENSMUSG00000079592	protein_coding	C1qtnf5	ENSMUST00000114816	protein_coding	principal1	9	1	44107245	1259
ENSMUSG00000081395	processed_pseudogene	Gm14879	ENSMUST00000117308	processed_pseudogene		X	-1	106633303	507
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000182583	protein_coding		5	1	34336685	619
ENSMUSG00000108030	bidirectional_promoter_lncRNA	9530062K07Rik	ENSMUST00000203332	bidirectional_promoter_lncRNA		6	-1	116207993	787
ENSMUSG00000027690	protein_coding	Slc2a2	ENSMUST00000169047	retained_intron		3	1	28721517	1649
ENSMUSG00000082174	processed_pseudogene	Gm14877	ENSMUST00000119803	processed_pseudogene		X	1	106611903	478
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000182047	protein_coding	principal1	5	1	34336932	2944
ENSMUSG00000070522	processed_pseudogene	Gm6505	ENSMUST00000094335	processed_pseudogene		3	-1	28765360	648
ENSMUSG00000037020	protein_coding	Wdr62	ENSMUST00000134570	protein_coding		7	-1	30262647	3245
ENSMUSG00000042757	protein_coding	Tmem108	ENSMUST00000049452	protein_coding	principal1	9	-1	103692807	3574
ENSMUSG00000029675	protein_coding	Eln	ENSMUST00000202570	retained_intron		5	-1	134725300	3076
ENSMUSG00000020310	protein_coding	Madcam1	ENSMUST00000217748	protein_coding	alternative2	10	1	79664587	944
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000182810	processed_transcript		5	1	34337319	357
ENSMUSG00000091329	antisense	1700112D23Rik	ENSMUST00000167704	antisense		3	-1	28781108	546
ENSMUSG00000029110	protein_coding	Rnf4	ENSMUST00000183265	retained_intron		5	1	34351116	4514
ENSMUSG00000099694	processed_pseudogene	Gm29610	ENSMUST00000187749	processed_pseudogene		1	1	43270683	453
ENSMUSG00000029675	protein_coding	Eln	ENSMUST00000201856	nonsense_mediated_decay		5	-1	134747246	2611
ENSMUSG00000091329	antisense	1700112D23Rik	ENSMUST00000193387	antisense		3	-1	28742240	299
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000042889	protein_coding	principal2	6	1	113077365	6755
ENSMUSG00000029675	protein_coding	Eln	ENSMUST00000202620	retained_intron		5	-1	134729106	1654
ENSMUSG00000058400	protein_coding	Qrfpr	ENSMUST00000091227	protein_coding	principal1	3	-1	36222313	1839
ENSMUSG00000038987	protein_coding	Cfap157	ENSMUST00000102813	protein_coding	principal1	2	-1	32784428	1730
ENSMUSG00000030173	protein_coding	Klra5	ENSMUST00000167079	retained_intron		6	-1	129903750	586
ENSMUSG00000029675	protein_coding	Eln	ENSMUST00000201399	retained_intron		5	-1	134747253	2528
ENSMUSG00000094553	protein_coding	Vmn1r50	ENSMUST00000089417	protein_coding	principal1	6	1	90101430	2059
ENSMUSG00000094553	protein_coding	Vmn1r50	ENSMUST00000226577	protein_coding	principal1	6	1	90101430	2240
ENSMUSG00000099576	lincRNA	Gm29040	ENSMUST00000189899	lincRNA		1	-1	43302925	1188
ENSMUSG00000107318	antisense	Gm30003	ENSMUST00000200700	antisense		5	1	134747042	1433
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000125554	nonsense_mediated_decay		6	-1	72362360	1100
ENSMUSG00000038987	protein_coding	Cfap157	ENSMUST00000150918	retained_intron		2	-1	32779146	269
ENSMUSG00000058400	protein_coding	Qrfpr	ENSMUST00000197275	retained_intron		3	-1	36222180	853
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000136128	processed_transcript		6	1	113077561	839
ENSMUSG00000094553	protein_coding	Vmn1r50	ENSMUST00000081706	protein_coding	principal1	6	1	90107275	933
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000130064	protein_coding		6	-1	72361396	829
ENSMUSG00000086940	lincRNA	Gm12746	ENSMUST00000151369	lincRNA		4	-1	106847920	615
ENSMUSG00000104568	antisense	Gm43255	ENSMUST00000198885	antisense		3	1	36203289	1437
ENSMUSG00000117690	lincRNA	Gm50430	ENSMUST00000237618	lincRNA		19	1	48117348	419
ENSMUSG00000106180	processed_pseudogene	Gm18893	ENSMUST00000198416	processed_pseudogene		3	-1	36214756	943
ENSMUSG00000073010	protein_coding	Gm5127	ENSMUST00000101296	protein_coding	principal1	X	1	106583186	1455
ENSMUSG00000079592	protein_coding	C1qtnf5	ENSMUST00000114821	protein_coding	principal1	9	1	44107254	1365
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000154098	protein_coding	alternative2	6	-1	72366956	969
ENSMUSG00000029587	protein_coding	Zfp12	ENSMUST00000077485	protein_coding	principal3	5	1	143235163	4294
ENSMUSG00000073010	protein_coding	Gm5127	ENSMUST00000101297	protein_coding	principal1	X	1	106583186	1809
ENSMUSG00000081651	processed_pseudogene	Gm15530	ENSMUST00000122206	processed_pseudogene		16	-1	38685869	555
ENSMUSG00000011427	protein_coding	Zfp790	ENSMUST00000178162	protein_coding	principal1	7	1	29816114	3356
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000149296	nonsense_mediated_decay		6	-1	72362344	739
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000129233	nonsense_mediated_decay		6	-1	72362390	789
ENSMUSG00000042757	protein_coding	Tmem108	ENSMUST00000189588	protein_coding	principal1	9	-1	103761837	2850
ENSMUSG00000020402	protein_coding	Vdac1	ENSMUST00000102758	protein_coding	principal1	11	1	52360860	2022
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000126065	nonsense_mediated_decay		6	-1	72362363	638
ENSMUSG00000114463	antisense	Gm48162	ENSMUST00000224418	antisense		14	1	16575601	436
ENSMUSG00000029587	protein_coding	Zfp12	ENSMUST00000032591	protein_coding	alternative2	5	1	143235174	5265
ENSMUSG00000079592	protein_coding	C1qtnf5	ENSMUST00000114818	protein_coding	principal1	9	1	44107274	1337
ENSMUSG00000085369	lincRNA	9430093N23Rik	ENSMUST00000152494	lincRNA		2	1	169234991	515
ENSMUSG00000042757	protein_coding	Tmem108	ENSMUST00000189066	protein_coding	principal1	9	-1	103761794	2145
ENSMUSG00000020402	protein_coding	Vdac1	ENSMUST00000157052	processed_transcript		11	1	52374100	600
ENSMUSG00000026579	protein_coding	F5	ENSMUST00000086040	protein_coding	principal1	1	1	164151838	7430
ENSMUSG00000011427	protein_coding	Zfp790	ENSMUST00000032796	protein_coding	principal1	7	1	29816119	3376
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000114095	protein_coding		6	-1	72362382	869
ENSMUSG00000021891	protein_coding	Mettl6	ENSMUST00000227777	protein_coding	alternative2	14	-1	31495008	2762
ENSMUSG00000042757	protein_coding	Tmem108	ENSMUST00000191069	retained_intron		9	-1	103493611	4768
ENSMUSG00000086840	lincRNA	Gm14250	ENSMUST00000148458	lincRNA		2	1	169389081	566
ENSMUSG00000020402	protein_coding	Vdac1	ENSMUST00000125694	nonsense_mediated_decay		11	1	52361135	951
ENSMUSG00000079592	protein_coding	C1qtnf5	ENSMUST00000152956	protein_coding		9	1	44107309	640
ENSMUSG00000042757	protein_coding	Tmem108	ENSMUST00000215136	protein_coding		9	-1	103761829	724
ENSMUSG00000029587	protein_coding	Zfp12	ENSMUST00000075916	nonsense_mediated_decay		5	1	143235247	4384
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000151063	nonsense_mediated_decay		6	-1	72362365	617
ENSMUSG00000020402	protein_coding	Vdac1	ENSMUST00000153339	retained_intron		11	1	52387197	637
ENSMUSG00000011427	protein_coding	Zfp790	ENSMUST00000207328	protein_coding		7	1	29818991	377
ENSMUSG00000048747	protein_coding	E130114P18Rik	ENSMUST00000146447	protein_coding		4	-1	97778048	1303
ENSMUSG00000020402	protein_coding	Vdac1	ENSMUST00000020673	protein_coding		11	1	52374263	891
ENSMUSG00000029587	protein_coding	Zfp12	ENSMUST00000162861	protein_coding		5	1	143235779	665
ENSMUSG00000112385	processed_pseudogene	Gm48258	ENSMUST00000217964	processed_pseudogene		12	1	59262673	312
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000136707	retained_intron		6	-1	72361067	418
ENSMUSG00000079592	protein_coding	C1qtnf5	ENSMUST00000114815	protein_coding	principal1	9	1	44107314	1215
ENSMUSG00000085350	lincRNA	4930529I22Rik	ENSMUST00000131509	lincRNA		2	-1	169405450	589
ENSMUSG00000107331	TEC	Gm42732	ENSMUST00000202887	TEC		5	1	73311364	1197
ENSMUSG00000002835	protein_coding	Chaf1a	ENSMUST00000002914	protein_coding	principal1	17	1	56040439	5535
ENSMUSG00000029587	protein_coding	Zfp12	ENSMUST00000160195	processed_transcript		5	1	143240039	729
ENSMUSG00000093601	unprocessed_pseudogene	Gm19459	ENSMUST00000176240	unprocessed_pseudogene		10	-1	58240661	835
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000133978	retained_intron		6	-1	72362428	728
ENSMUSG00000028642	protein_coding	Tmem269	ENSMUST00000030394	protein_coding	alternative2	4	-1	119218217	1452
ENSMUSG00000079592	protein_coding	C1qtnf5	ENSMUST00000206295	protein_coding		9	1	44107321	260
ENSMUSG00000051504	protein_coding	Siglech	ENSMUST00000121492	protein_coding		7	1	55768184	1655
ENSMUSG00000055850	protein_coding	Rnf181	ENSMUST00000205399	retained_intron		6	-1	72361995	798
ENSMUSG00000118391	antisense	Gm19519	ENSMUST00000236816	antisense		18	-1	57792360	537
ENSMUSG00000086593	lincRNA	Gm16548	ENSMUST00000133341	lincRNA		1	-1	164152217	1226
ENSMUSG00000042757	protein_coding	Tmem108	ENSMUST00000186455	retained_intron		9	-1	103761790	1591
ENSMUSG00000079592	protein_coding	C1qtnf5	ENSMUST00000206769	protein_coding		9	1	44107375	565
ENSMUSG00000021891	protein_coding	Mettl6	ENSMUST00000055303	protein_coding	principal2	14	-1	31495040	3946
ENSMUSG00000118391	antisense	Gm19519	ENSMUST00000236754	antisense		18	-1	57747565	687
ENSMUSG00000048747	protein_coding	E130114P18Rik	ENSMUST00000147925	processed_transcript		4	-1	97584636	1018
ENSMUSG00000060863	protein_coding	Tcl1b2	ENSMUST00000142230	protein_coding		12	1	105146014	851
ENSMUSG00000111278	antisense	Gm32743	ENSMUST00000214196	antisense		9	1	103521787	594
ENSMUSG00000030173	protein_coding	Klra5	ENSMUST00000118060	protein_coding	principal1	6	-1	129917650	1279
ENSMUSG00000059279	protein_coding	Olfr224	ENSMUST00000216758	protein_coding	principal1	11	-1	58570553	1742
ENSMUSG00000102441	TEC	Gm38032	ENSMUST00000195052	TEC		9	-1	103600164	1589
ENSMUSG00000079592	protein_coding	C1qtnf5	ENSMUST00000205500	protein_coding		9	1	44107515	707
ENSMUSG00000118391	antisense	Gm19519	ENSMUST00000235775	antisense		18	-1	57779995	2961
ENSMUSG00000028642	protein_coding	Tmem269	ENSMUST00000212054	protein_coding	principal2	4	-1	119218217	1504
ENSMUSG00000048747	protein_coding	E130114P18Rik	ENSMUST00000107068	protein_coding	principal5	4	-1	97584629	1132
ENSMUSG00000059279	protein_coding	Olfr224	ENSMUST00000217009	protein_coding	principal1	11	-1	58569167	2098
ENSMUSG00000118391	antisense	Gm19519	ENSMUST00000236807	antisense		18	-1	57792333	350
ENSMUSG00000021891	protein_coding	Mettl6	ENSMUST00000227595	protein_coding		14	-1	31495021	1027
ENSMUSG00000002835	protein_coding	Chaf1a	ENSMUST00000233325	retained_intron		17	1	56046814	7698
ENSMUSG00000102257	TEC	Gm37649	ENSMUST00000192079	TEC		9	-1	103543534	2232
ENSMUSG00000111632	TEC	Gm47327	ENSMUST00000216960	TEC		9	1	44110909	262
ENSMUSG00000059279	protein_coding	Olfr224	ENSMUST00000215322	protein_coding	principal1	11	-1	58569167	1940
ENSMUSG00000111415	antisense	Gm39325	ENSMUST00000216448	antisense		9	-1	44071468	920
ENSMUSG00000062580	protein_coding	Timm17a	ENSMUST00000081104	protein_coding	principal1	1	-1	135313778	7280
ENSMUSG00000048747	protein_coding	E130114P18Rik	ENSMUST00000107067	protein_coding	alternative2	4	-1	97584607	1092
ENSMUSG00000021891	protein_coding	Mettl6	ENSMUST00000228181	protein_coding		14	-1	31494992	793
ENSMUSG00000030173	protein_coding	Klra5	ENSMUST00000169901	protein_coding		6	-1	129913166	792
ENSMUSG00000060863	protein_coding	Tcl1b2	ENSMUST00000146174	nonsense_mediated_decay		12	1	105147019	1082
ENSMUSG00000002835	protein_coding	Chaf1a	ENSMUST00000232828	protein_coding		17	1	56057743	726
ENSMUSG00000059279	protein_coding	Olfr224	ENSMUST00000081102	protein_coding	principal1	11	-1	58567343	945
ENSMUSG00000048747	protein_coding	E130114P18Rik	ENSMUST00000147069	processed_transcript		4	-1	97778078	348
ENSMUSG00000021891	protein_coding	Mettl6	ENSMUST00000228727	protein_coding	alternative2	14	-1	31495030	2388
ENSMUSG00000048747	protein_coding	E130114P18Rik	ENSMUST00000126721	processed_transcript		4	-1	97584620	1024
ENSMUSG00000081775	processed_pseudogene	Gm12420	ENSMUST00000119869	processed_pseudogene		4	1	84697863	1048
ENSMUSG00000033306	protein_coding	Lpp	ENSMUST00000231352	retained_intron		16	1	24393507	4137
ENSMUSG00000069372	protein_coding	Ctxn3	ENSMUST00000091892	protein_coding	principal1	18	1	57468516	1441
ENSMUSG00000030173	protein_coding	Klra5	ENSMUST00000014683	protein_coding	principal1	6	-1	129913224	1147
ENSMUSG00000021891	protein_coding	Mettl6	ENSMUST00000226986	protein_coding		14	-1	31487618	295
ENSMUSG00000108156	unprocessed_pseudogene	Olfr326-ps1	ENSMUST00000204790	unprocessed_pseudogene		11	-1	58575370	392
ENSMUSG00000046658	protein_coding	Zfp316	ENSMUST00000161448	protein_coding	principal1	5	-1	143270022	6891
ENSMUSG00000062580	protein_coding	Timm17a	ENSMUST00000152706	retained_intron		1	-1	135309839	565
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000058716	protein_coding	principal3	5	1	139200637	4134
ENSMUSG00000046658	protein_coding	Zfp316	ENSMUST00000197349	retained_intron		5	-1	143256200	5912
ENSMUSG00000021891	protein_coding	Mettl6	ENSMUST00000227095	processed_transcript		14	-1	31482647	511
ENSMUSG00000086413	lincRNA	Gm12415	ENSMUST00000141637	lincRNA		4	1	84741475	512
ENSMUSG00000069372	protein_coding	Ctxn3	ENSMUST00000209782	protein_coding		18	1	57468522	595
ENSMUSG00000085168	antisense	Gm16252	ENSMUST00000144420	antisense		9	1	103472084	857
ENSMUSG00000046658	protein_coding	Zfp316	ENSMUST00000051665	protein_coding	principal1	5	-1	143264656	3054
ENSMUSG00000069372	protein_coding	Ctxn3	ENSMUST00000209786	protein_coding	principal1	18	1	57472453	1283
ENSMUSG00000085168	antisense	Gm16252	ENSMUST00000216712	antisense		9	1	103489326	1359
ENSMUSG00000062580	protein_coding	Timm17a	ENSMUST00000134088	protein_coding		1	-1	135313691	468
ENSMUSG00000021891	protein_coding	Mettl6	ENSMUST00000228309	retained_intron		14	-1	31487905	706
ENSMUSG00000085168	antisense	Gm16252	ENSMUST00000215604	antisense		9	1	103489328	1232
ENSMUSG00000060863	protein_coding	Tcl1b2	ENSMUST00000081379	protein_coding	principal1	12	1	105147033	1009
ENSMUSG00000021891	protein_coding	Mettl6	ENSMUST00000228943	protein_coding		14	-1	31493694	593
ENSMUSG00000062580	protein_coding	Timm17a	ENSMUST00000125454	protein_coding		1	-1	135311345	636
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000110883	protein_coding	alternative2	5	1	139200643	3714
ENSMUSG00000060765	protein_coding	Olfr325	ENSMUST00000203418	protein_coding	principal1	11	1	58577730	1649
ENSMUSG00000048747	protein_coding	E130114P18Rik	ENSMUST00000148653	processed_transcript		4	-1	97584596	1224
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000110884	protein_coding	alternative2	5	1	139200660	3955
ENSMUSG00000037020	protein_coding	Wdr62	ENSMUST00000145027	nonsense_mediated_decay		7	-1	30280396	4768
ENSMUSG00000108387	bidirectional_promoter_lncRNA	Gm31510	ENSMUST00000206795	bidirectional_promoter_lncRNA		7	-1	79272811	239
ENSMUSG00000021891	protein_coding	Mettl6	ENSMUST00000227852	retained_intron		14	-1	31495032	692
ENSMUSG00000060765	protein_coding	Olfr325	ENSMUST00000169428	protein_coding	principal1	11	1	58580813	1065
ENSMUSG00000108387	bidirectional_promoter_lncRNA	Gm31510	ENSMUST00000206434	bidirectional_promoter_lncRNA		7	-1	79273035	235
ENSMUSG00000048747	protein_coding	E130114P18Rik	ENSMUST00000151946	processed_transcript		4	-1	97584612	503
ENSMUSG00000027966	protein_coding	Col11a1	ENSMUST00000092155	protein_coding	principal1	3	1	114030540	7667
ENSMUSG00000048747	protein_coding	E130114P18Rik	ENSMUST00000186369	protein_coding		4	-1	97690736	306
ENSMUSG00000101923	processed_pseudogene	Gm29041	ENSMUST00000189199	processed_pseudogene		1	1	43409584	380
ENSMUSG00000058491	protein_coding	Olfr869	ENSMUST00000213024	protein_coding	principal1	9	1	20129009	1783
ENSMUSG00000027966	protein_coding	Col11a1	ENSMUST00000196345	retained_intron		3	1	114030634	2519
ENSMUSG00000020308	protein_coding	Tpgs1	ENSMUST00000020552	protein_coding	alternative2	10	1	79669369	1143
ENSMUSG00000027966	protein_coding	Col11a1	ENSMUST00000196654	retained_intron		3	1	114060442	969
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000142473	retained_intron		5	1	139200667	2168
ENSMUSG00000051504	protein_coding	Siglech	ENSMUST00000060416	protein_coding	principal3	7	1	55768226	2138
ENSMUSG00000037020	protein_coding	Wdr62	ENSMUST00000108190	protein_coding	principal1	7	-1	30280419	4742
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000100517	protein_coding		5	1	139200667	1522
ENSMUSG00000085710	processed_transcript	Gm12676	ENSMUST00000149078	processed_transcript		4	-1	97757389	808
ENSMUSG00000020308	protein_coding	Tpgs1	ENSMUST00000219585	processed_transcript		10	1	79669883	368
ENSMUSG00000051504	protein_coding	Siglech	ENSMUST00000094360	protein_coding	alternative2	7	1	55768226	2301
ENSMUSG00000020308	protein_coding	Tpgs1	ENSMUST00000220175	processed_transcript		10	1	79669913	278
ENSMUSG00000109636	TEC	Gm45644	ENSMUST00000210255	TEC		8	1	57696723	2740
ENSMUSG00000066899	protein_coding	Olfr870	ENSMUST00000215984	protein_coding	principal1	9	-1	20174057	4091
ENSMUSG00000022702	protein_coding	Hira	ENSMUST00000120532	protein_coding		16	1	18877037	2044
ENSMUSG00000037020	protein_coding	Wdr62	ENSMUST00000152543	retained_intron		7	-1	30240883	648
ENSMUSG00000086236	antisense	5830418P13Rik	ENSMUST00000143564	antisense		9	1	103423578	2178
ENSMUSG00000066899	protein_coding	Olfr870	ENSMUST00000086476	protein_coding	principal1	9	-1	20171569	936
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000127045	protein_coding		5	1	139200669	387
ENSMUSG00000037020	protein_coding	Wdr62	ENSMUST00000133347	retained_intron		7	-1	30242278	374
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000143562	protein_coding		5	1	139200671	621
ENSMUSG00000110162	lincRNA	Gm45356	ENSMUST00000209274	lincRNA		8	1	57699774	823
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000123414	retained_intron		5	1	139200675	643
ENSMUSG00000078485	protein_coding	Plekhn1	ENSMUST00000219227	retained_intron		4	-1	156228500	4620
ENSMUSG00000027966	protein_coding	Col11a1	ENSMUST00000211802	nonsense_mediated_decay		3	1	114129389	675
ENSMUSG00000026523	protein_coding	Wdr64	ENSMUST00000195794	processed_transcript		1	1	175698593	1392
ENSMUSG00000020308	protein_coding	Tpgs1	ENSMUST00000239401	protein_coding	principal2	10	1	79669410	1101
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000078690	protein_coding	alternative2	5	1	139200680	2608
ENSMUSG00000118495	processed_pseudogene	AC161757.1	ENSMUST00000238830	processed_pseudogene		5	-1	64898969	2047
ENSMUSG00000051504	protein_coding	Siglech	ENSMUST00000165045	protein_coding	alternative2	7	1	55768236	1062
ENSMUSG00000037020	protein_coding	Wdr62	ENSMUST00000132483	retained_intron		7	-1	30251875	791
ENSMUSG00000078584	protein_coding	AU022252	ENSMUST00000132778	processed_transcript		4	-1	119232708	3689
ENSMUSG00000086236	antisense	5830418P13Rik	ENSMUST00000145185	antisense		9	1	103425161	913
ENSMUSG00000027966	protein_coding	Col11a1	ENSMUST00000138680	retained_intron		3	1	114147129	2112
ENSMUSG00000051504	protein_coding	Siglech	ENSMUST00000173835	protein_coding		7	1	55768236	833
ENSMUSG00000037020	protein_coding	Wdr62	ENSMUST00000152234	retained_intron		7	-1	30250565	573
ENSMUSG00000086236	antisense	5830418P13Rik	ENSMUST00000194378	antisense		9	1	103426593	911
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000146715	protein_coding		5	1	139200685	650
ENSMUSG00000027966	protein_coding	Col11a1	ENSMUST00000184978	nonsense_mediated_decay		3	1	114165278	2570
ENSMUSG00000086236	antisense	5830418P13Rik	ENSMUST00000216140	antisense		9	1	103426668	887
ENSMUSG00000086236	antisense	5830418P13Rik	ENSMUST00000218189	antisense		9	1	103441376	346
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000136311	processed_transcript		5	1	139211941	233
ENSMUSG00000051504	protein_coding	Siglech	ENSMUST00000154933	nonsense_mediated_decay		7	1	55768261	2117
ENSMUSG00000051504	protein_coding	Siglech	ENSMUST00000171077	protein_coding	principal3	7	1	55768184	1934
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000148772	protein_coding		5	1	139211973	641
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000110882	protein_coding	alternative2	5	1	139212027	2454
ENSMUSG00000080742	processed_pseudogene	Gm14035	ENSMUST00000117596	processed_pseudogene		2	1	54284115	1475
ENSMUSG00000103945	TEC	Gm38228	ENSMUST00000193169	TEC		1	1	43560273	1293
ENSMUSG00000103422	TEC	Gm37536	ENSMUST00000194710	TEC		1	1	43488447	2491
ENSMUSG00000021890	protein_coding	Eaf1	ENSMUST00000022446	protein_coding	principal1	14	1	31494399	4918
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000129079	protein_coding		5	1	139212267	566
ENSMUSG00000098434	lincRNA	2010110E17Rik	ENSMUST00000184161	lincRNA		8	1	86885688	879
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000238845	protein_coding		6	1	42286685	1061
ENSMUSG00000109706	processed_pseudogene	Fth-ps3	ENSMUST00000210405	processed_pseudogene		8	1	86915157	358
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000153469	processed_transcript		5	1	139223678	725
ENSMUSG00000032556	protein_coding	Bfsp2	ENSMUST00000136636	processed_transcript		9	-1	103449096	772
ENSMUSG00000021890	protein_coding	Eaf1	ENSMUST00000228952	retained_intron		14	1	31495196	627
ENSMUSG00000022799	protein_coding	Arhgap31	ENSMUST00000023487	protein_coding	principal1	16	-1	38713274	7964
ENSMUSG00000098534	lincRNA	Gm27167	ENSMUST00000183752	lincRNA		8	1	86902453	511
ENSMUSG00000020869	protein_coding	Lrrc59	ENSMUST00000021239	protein_coding	principal1	11	1	94629767	2837
ENSMUSG00000021890	protein_coding	Eaf1	ENSMUST00000226564	retained_intron		14	1	31502253	528
ENSMUSG00000028037	protein_coding	Ifi44	ENSMUST00000029671	protein_coding	principal1	3	-1	151749960	2910
ENSMUSG00000058925	protein_coding	Ccdc192	ENSMUST00000079738	protein_coding	principal3	18	1	57533780	1013
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000135720	protein_coding		5	1	139225276	593
ENSMUSG00000099162	lincRNA	Gm27168	ENSMUST00000183394	lincRNA		8	-1	86921147	361
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000135926	protein_coding		5	1	139226743	768
ENSMUSG00000066877	protein_coding	Nck2	ENSMUST00000187435	protein_coding		1	1	43444579	372
ENSMUSG00000021890	protein_coding	Eaf1	ENSMUST00000227551	processed_transcript		14	1	31506229	832
ENSMUSG00000020869	protein_coding	Lrrc59	ENSMUST00000138782	retained_intron		11	1	94629814	856
ENSMUSG00000085952	lincRNA	Gm12315	ENSMUST00000151599	lincRNA		11	-1	70625561	911
ENSMUSG00000058925	protein_coding	Ccdc192	ENSMUST00000135806	protein_coding	alternative2	18	1	57533829	831
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000126108	retained_intron		5	1	139231104	876
ENSMUSG00000022799	protein_coding	Arhgap31	ENSMUST00000124866	retained_intron		16	-1	38712899	1557
ENSMUSG00000111330	processed_pseudogene	Gm19790	ENSMUST00000214414	processed_pseudogene		9	1	14679970	251
ENSMUSG00000083684	processed_pseudogene	Gm14034	ENSMUST00000120147	processed_pseudogene		2	-1	54356891	551
ENSMUSG00000111483	processed_pseudogene	Gm18997	ENSMUST00000216353	processed_pseudogene		9	1	14693523	822
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000128817	protein_coding		5	1	139235577	774
ENSMUSG00000026580	protein_coding	Selp	ENSMUST00000162746	protein_coding	principal1	1	1	164115264	3438
ENSMUSG00000022799	protein_coding	Arhgap31	ENSMUST00000132697	retained_intron		16	-1	38712898	2956
ENSMUSG00000058925	protein_coding	Ccdc192	ENSMUST00000127130	protein_coding		18	1	57533882	461
ENSMUSG00000066362	processed_pseudogene	Rps13-ps1	ENSMUST00000183478	processed_pseudogene		8	1	87047689	538
ENSMUSG00000028037	protein_coding	Ifi44	ENSMUST00000149919	processed_transcript		3	-1	151749882	531
ENSMUSG00000110349	processed_pseudogene	Gm18602	ENSMUST00000209794	processed_pseudogene		8	-1	87052247	851
ENSMUSG00000058925	protein_coding	Ccdc192	ENSMUST00000123872	protein_coding		18	1	57563176	829
ENSMUSG00000036817	protein_coding	Sun1	ENSMUST00000127310	nonsense_mediated_decay		5	1	139241354	569
ENSMUSG00000026580	protein_coding	Selp	ENSMUST00000160000	retained_intron		1	1	164141318	339
ENSMUSG00000028037	protein_coding	Ifi44	ENSMUST00000133888	retained_intron		3	-1	151749947	4064
ENSMUSG00000066877	protein_coding	Nck2	ENSMUST00000136648	processed_transcript		1	1	43445751	1515
ENSMUSG00000117864	processed_transcript	Gm19500	ENSMUST00000238028	processed_transcript		18	1	57405415	2682
ENSMUSG00000078584	protein_coding	AU022252	ENSMUST00000141112	protein_coding	principal1	4	-1	119232712	7151
ENSMUSG00000028037	protein_coding	Ifi44	ENSMUST00000127733	processed_transcript		3	-1	151749903	405
ENSMUSG00000036026	protein_coding	Tmem63b	ENSMUST00000113523	protein_coding	principal1	17	-1	45686259	3284
ENSMUSG00000118322	antisense	2210409D07Rik	ENSMUST00000236285	antisense		18	-1	57638585	458
ENSMUSG00000096695	protein_coding	Olfr196	ENSMUST00000205471	protein_coding	principal1	16	-1	59170454	1711
ENSMUSG00000050675	protein_coding	Gp1ba	ENSMUST00000108551	protein_coding	principal1	11	1	70639144	2480
ENSMUSG00000096695	protein_coding	Olfr196	ENSMUST00000077027	protein_coding	principal1	16	-1	59168141	930
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000234342	retained_intron		17	1	24414565	2106
ENSMUSG00000078584	protein_coding	AU022252	ENSMUST00000046260	processed_transcript		4	-1	119232678	657
ENSMUSG00000050675	protein_coding	Gp1ba	ENSMUST00000055184	protein_coding	principal1	11	1	70639122	2710
ENSMUSG00000026580	protein_coding	Selp	ENSMUST00000161152	nonsense_mediated_decay		1	1	164141877	917
ENSMUSG00000078584	protein_coding	AU022252	ENSMUST00000144309	processed_transcript		4	-1	119232685	441
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000125003	processed_transcript		6	1	113077602	811
ENSMUSG00000109020	polymorphic_pseudogene	Olfr197	ENSMUST00000207772	polymorphic_pseudogene	principal1	16	-1	59189928	1320
ENSMUSG00000087074	lincRNA	Gm14249	ENSMUST00000156239	lincRNA		2	1	169480617	1017
ENSMUSG00000036026	protein_coding	Tmem63b	ENSMUST00000151439	retained_intron		17	-1	45665198	848
ENSMUSG00000085626	processed_transcript	Gm12898	ENSMUST00000144407	processed_transcript		4	1	119223174	642
ENSMUSG00000026580	protein_coding	Selp	ENSMUST00000161020	retained_intron		1	1	164144702	1392
ENSMUSG00000098854	lincRNA	Gm5118	ENSMUST00000184692	lincRNA		8	1	87093307	2203
ENSMUSG00000026580	protein_coding	Selp	ENSMUST00000162102	retained_intron		1	1	164146763	778
ENSMUSG00000089790	processed_pseudogene	Gm16588	ENSMUST00000162889	processed_pseudogene		1	1	164166579	355
ENSMUSG00000036026	protein_coding	Tmem63b	ENSMUST00000129177	retained_intron		17	-1	45666454	1193
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000153513	processed_transcript		6	1	113104935	3334
ENSMUSG00000066877	protein_coding	Nck2	ENSMUST00000086421	protein_coding	principal1	1	1	43445751	2772
ENSMUSG00000090081	antisense	Gm16587	ENSMUST00000161943	antisense		1	-1	164146366	863
ENSMUSG00000036026	protein_coding	Tmem63b	ENSMUST00000145873	protein_coding		17	-1	45685973	1011
ENSMUSG00000036026	protein_coding	Tmem63b	ENSMUST00000156254	protein_coding		17	-1	45686905	1007
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000113155	protein_coding	alternative1	6	1	113105037	6362
ENSMUSG00000024414	protein_coding	Mrpl27	ENSMUST00000025278	protein_coding	principal1	11	1	94653767	756
ENSMUSG00000016495	protein_coding	Plgrkt	ENSMUST00000143467	protein_coding	principal1	19	-1	29361970	1020
ENSMUSG00000036026	protein_coding	Tmem63b	ENSMUST00000133741	protein_coding		17	-1	45680623	716
ENSMUSG00000066877	protein_coding	Nck2	ENSMUST00000124817	processed_transcript		1	1	43457273	1421
ENSMUSG00000094588	protein_coding	Olfr898	ENSMUST00000216304	protein_coding	alternative2	9	1	38348597	3979
ENSMUSG00000020105	protein_coding	Lrig3	ENSMUST00000218363	retained_intron		10	1	125966168	1304
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000124467	retained_intron		6	1	113108873	3848
ENSMUSG00000094588	protein_coding	Olfr898	ENSMUST00000217063	protein_coding	alternative2	9	1	38348411	4169
ENSMUSG00000066877	protein_coding	Nck2	ENSMUST00000202540	protein_coding		1	1	43532405	578
ENSMUSG00000099207	lincRNA	Gm10637	ENSMUST00000183718	lincRNA		8	-1	87199839	828
ENSMUSG00000036026	protein_coding	Tmem63b	ENSMUST00000127065	protein_coding		17	-1	45686137	902
ENSMUSG00000016495	protein_coding	Plgrkt	ENSMUST00000152936	protein_coding		19	-1	29361873	604
ENSMUSG00000094588	protein_coding	Olfr898	ENSMUST00000076504	protein_coding	principal2	9	1	38349085	951
ENSMUSG00000021279	protein_coding	Cdc42bpb	ENSMUST00000041965	protein_coding	principal1	12	-1	111377718	6714
ENSMUSG00000066877	protein_coding	Nck2	ENSMUST00000114744	protein_coding		1	1	43533569	420
ENSMUSG00000099207	lincRNA	Gm10637	ENSMUST00000184702	lincRNA		8	-1	87199850	3233
ENSMUSG00000029250	protein_coding	Polr2b	ENSMUST00000031167	protein_coding	principal1	5	1	77310147	4145
ENSMUSG00000032556	protein_coding	Bfsp2	ENSMUST00000124310	protein_coding	principal1	9	-1	103480420	1662
ENSMUSG00000016495	protein_coding	Plgrkt	ENSMUST00000016639	protein_coding	principal1	19	-1	29361970	1012
ENSMUSG00000036026	protein_coding	Tmem63b	ENSMUST00000143907	protein_coding		17	-1	45686120	507
ENSMUSG00000058357	processed_pseudogene	Gm6612	ENSMUST00000170777	processed_pseudogene		15	1	80952505	395
ENSMUSG00000021279	protein_coding	Cdc42bpb	ENSMUST00000222483	processed_transcript		12	-1	111294601	634
ENSMUSG00000049864	protein_coding	Olfr250	ENSMUST00000216168	protein_coding	alternative2	9	1	38366896	3969
ENSMUSG00000021279	protein_coding	Cdc42bpb	ENSMUST00000220657	protein_coding		12	-1	111296275	802
ENSMUSG00000016495	protein_coding	Plgrkt	ENSMUST00000141838	retained_intron		19	-1	29351865	895
ENSMUSG00000024414	protein_coding	Mrpl27	ENSMUST00000132813	processed_transcript		11	1	94653776	655
ENSMUSG00000049864	protein_coding	Olfr250	ENSMUST00000052085	protein_coding	principal2	9	1	38367548	996
ENSMUSG00000024414	protein_coding	Mrpl27	ENSMUST00000129498	processed_transcript		11	1	94654011	442
ENSMUSG00000016495	protein_coding	Plgrkt	ENSMUST00000155367	protein_coding		19	-1	29361407	819
ENSMUSG00000036026	protein_coding	Tmem63b	ENSMUST00000131089	processed_transcript		17	-1	45686887	438
ENSMUSG00000020105	protein_coding	Lrig3	ENSMUST00000217813	retained_intron		10	1	125966219	1614
ENSMUSG00000021279	protein_coding	Cdc42bpb	ENSMUST00000222724	protein_coding		12	-1	111314537	746
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000149584	retained_intron		6	1	113109865	5023
ENSMUSG00000024594	protein_coding	Prrc1	ENSMUST00000025490	protein_coding	principal1	18	1	57354741	5030
ENSMUSG00000016495	protein_coding	Plgrkt	ENSMUST00000126800	protein_coding		19	-1	29361824	405
ENSMUSG00000024414	protein_coding	Mrpl27	ENSMUST00000125148	processed_transcript		11	1	94654031	439
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000204377	retained_intron		6	1	113110417	3273
ENSMUSG00000098684	lincRNA	Gm27246	ENSMUST00000183611	lincRNA		8	1	87114645	1240
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000138327	retained_intron		6	1	113110417	1526
ENSMUSG00000024594	protein_coding	Prrc1	ENSMUST00000237031	retained_intron		18	1	57354746	1147
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000141072	retained_intron		6	1	113125349	5034
ENSMUSG00000016495	protein_coding	Plgrkt	ENSMUST00000138051	protein_coding		19	-1	29367308	653
ENSMUSG00000020105	protein_coding	Lrig3	ENSMUST00000220332	retained_intron		10	1	125966234	2555
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000150107	retained_intron		6	1	113127749	3029
ENSMUSG00000024594	protein_coding	Prrc1	ENSMUST00000238069	protein_coding		18	1	57354890	741
ENSMUSG00000021279	protein_coding	Cdc42bpb	ENSMUST00000220619	processed_transcript		12	-1	111302439	490
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000156048	processed_transcript		6	1	113128681	656
ENSMUSG00000016495	protein_coding	Plgrkt	ENSMUST00000129608	processed_transcript		19	-1	29363899	476
ENSMUSG00000016495	protein_coding	Plgrkt	ENSMUST00000139860	processed_transcript		19	-1	29364462	750
ENSMUSG00000021279	protein_coding	Cdc42bpb	ENSMUST00000222196	protein_coding		12	-1	111377619	669
ENSMUSG00000034269	protein_coding	Setd5	ENSMUST00000113157	protein_coding	alternative1	6	1	113077639	6527
ENSMUSG00000066359	protein_coding	Tcl1b1	ENSMUST00000085043	protein_coding	principal2	12	1	105159690	1040
ENSMUSG00000024594	protein_coding	Prrc1	ENSMUST00000236755	processed_transcript		18	1	57373892	489
ENSMUSG00000097381	antisense	A230087F16Rik	ENSMUST00000181561	antisense		12	1	111284762	1303
ENSMUSG00000023939	protein_coding	Mrpl14	ENSMUST00000024734	protein_coding	principal1	17	1	45686322	645
ENSMUSG00000016495	protein_coding	Plgrkt	ENSMUST00000139176	processed_transcript		19	-1	29367390	986
ENSMUSG00000024594	protein_coding	Prrc1	ENSMUST00000238057	processed_transcript		18	1	57373892	523
ENSMUSG00000066359	protein_coding	Tcl1b1	ENSMUST00000222342	protein_coding	alternative2	12	1	105159702	664
ENSMUSG00000024827	protein_coding	Gldc	ENSMUST00000025778	protein_coding	principal1	19	-1	30175429	3767
ENSMUSG00000097381	antisense	A230087F16Rik	ENSMUST00000181055	antisense		12	1	111284784	2098
ENSMUSG00000024594	protein_coding	Prrc1	ENSMUST00000236709	retained_intron		18	1	57380801	9711
ENSMUSG00000029250	protein_coding	Polr2b	ENSMUST00000138121	retained_intron		5	1	77310491	261
ENSMUSG00000082380	processed_pseudogene	Gm12218	ENSMUST00000117666	processed_pseudogene		11	-1	53903155	399
ENSMUSG00000029250	protein_coding	Polr2b	ENSMUST00000132134	retained_intron		5	1	77325890	740
ENSMUSG00000101945	processed_pseudogene	Gm29138	ENSMUST00000191444	processed_pseudogene		1	-1	55370363	348
ENSMUSG00000103746	TEC	1700001G17Rik	ENSMUST00000191779	TEC		1	1	33669824	889
ENSMUSG00000103746	TEC	1700001G17Rik	ENSMUST00000191965	TEC		1	1	33669843	870
ENSMUSG00000029250	protein_coding	Polr2b	ENSMUST00000150191	retained_intron		5	1	77340368	509
ENSMUSG00000082271	processed_pseudogene	Gm12217	ENSMUST00000118858	processed_pseudogene		11	1	53902190	696
ENSMUSG00000102198	TEC	Gm38173	ENSMUST00000193126	TEC		1	-1	33674228	2314
ENSMUSG00000086607	antisense	4930511M06Rik	ENSMUST00000130696	antisense		18	-1	57552201	698
ENSMUSG00000086607	antisense	4930511M06Rik	ENSMUST00000130724	antisense		18	-1	57551776	338
ENSMUSG00000112957	lincRNA	4930547H16Rik	ENSMUST00000222281	lincRNA		13	-1	69772632	907
ENSMUSG00000098229	processed_pseudogene	Gm7719	ENSMUST00000182374	processed_pseudogene		12	1	59291964	975
ENSMUSG00000023939	protein_coding	Mrpl14	ENSMUST00000149040	processed_transcript		17	1	45686357	531
ENSMUSG00000085713	antisense	Gm15736	ENSMUST00000141710	antisense		5	1	113644963	420
ENSMUSG00000112583	processed_pseudogene	Gm4930	ENSMUST00000219926	processed_pseudogene		12	-1	59318169	1087
ENSMUSG00000093628	antisense	Gm20616	ENSMUST00000177262	antisense		19	-1	26623419	716
ENSMUSG00000023939	protein_coding	Mrpl14	ENSMUST00000148537	processed_transcript		17	1	45695416	510
ENSMUSG00000112867	processed_pseudogene	Gm48263	ENSMUST00000219756	processed_pseudogene		12	1	59336828	184
ENSMUSG00000093628	antisense	Gm20616	ENSMUST00000177453	antisense		19	-1	26623410	620
ENSMUSG00000086472	antisense	Gm16172	ENSMUST00000156224	antisense		17	1	45663519	682
ENSMUSG00000118395	unprocessed_pseudogene	Gm50459	ENSMUST00000238196	unprocessed_pseudogene		11	-1	53918851	192
ENSMUSG00000086607	antisense	4930511M06Rik	ENSMUST00000153884	antisense		18	-1	57551879	888
ENSMUSG00000118331	processed_pseudogene	Gm18380	ENSMUST00000237538	processed_pseudogene		19	1	26802075	737
ENSMUSG00000024827	protein_coding	Gldc	ENSMUST00000235189	retained_intron		19	-1	30175429	2866
ENSMUSG00000086607	antisense	4930511M06Rik	ENSMUST00000137603	antisense		18	-1	57552395	2651
ENSMUSG00000034855	protein_coding	Cxcl10	ENSMUST00000201176	retained_intron		5	-1	92348867	2230
ENSMUSG00000000701	protein_coding	Tcl1b5	ENSMUST00000000717	protein_coding	principal1	12	1	105176344	1055
ENSMUSG00000024827	protein_coding	Gldc	ENSMUST00000235203	retained_intron		19	-1	30145231	2139
ENSMUSG00000086607	antisense	4930511M06Rik	ENSMUST00000151209	antisense		18	-1	57552397	1058
ENSMUSG00000058607	processed_pseudogene	Rpl31-ps20	ENSMUST00000080982	processed_pseudogene		19	1	30160620	378
ENSMUSG00000022702	protein_coding	Hira	ENSMUST00000004222	protein_coding	principal1	16	1	18877066	4218
ENSMUSG00000093966	TR_V_gene	Trav4-3	ENSMUST00000103655	TR_V_gene	principal1	14	1	53598828	411
ENSMUSG00000039055	protein_coding	Eme1	ENSMUST00000039949	protein_coding	principal1	11	-1	94653964	2444
ENSMUSG00000026523	protein_coding	Wdr64	ENSMUST00000194087	protein_coding	alternative2	1	1	175698787	3225
ENSMUSG00000039055	protein_coding	Eme1	ENSMUST00000127158	processed_transcript		11	-1	94650531	747
ENSMUSG00000050855	protein_coding	Zfp940	ENSMUST00000108223	protein_coding		7	-1	29853669	2560
ENSMUSG00000085800	lincRNA	1700066O22Rik	ENSMUST00000150994	lincRNA		18	-1	57533752	961
ENSMUSG00000026523	protein_coding	Wdr64	ENSMUST00000194783	nonsense_mediated_decay		1	1	175767038	2161
ENSMUSG00000042190	protein_coding	Cmklr1	ENSMUST00000047936	protein_coding	principal1	5	-1	113650426	2882
ENSMUSG00000039055	protein_coding	Eme1	ENSMUST00000128643	processed_transcript		11	-1	94650706	728
ENSMUSG00000029378	protein_coding	Areg	ENSMUST00000031325	protein_coding	principal1	5	1	91139599	1215
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000031894	protein_coding	principal1	6	1	42286685	3545
ENSMUSG00000039055	protein_coding	Eme1	ENSMUST00000128447	processed_transcript		11	-1	94653671	569
ENSMUSG00000042190	protein_coding	Cmklr1	ENSMUST00000132065	protein_coding		5	-1	113627615	1081
ENSMUSG00000113639	processed_pseudogene	Gm20288	ENSMUST00000222078	processed_pseudogene		13	1	69775436	180
ENSMUSG00000085800	lincRNA	1700066O22Rik	ENSMUST00000151669	lincRNA		18	-1	57533728	334
ENSMUSG00000050855	protein_coding	Zfp940	ENSMUST00000145098	retained_intron		7	-1	29853641	3712
ENSMUSG00000068940	protein_coding	Tcl1b3	ENSMUST00000090990	protein_coding	principal1	12	1	105191043	1045
ENSMUSG00000026523	protein_coding	Wdr64	ENSMUST00000094288	protein_coding	principal2	1	1	175698593	3817
ENSMUSG00000009733	protein_coding	Tfcp2	ENSMUST00000231174	protein_coding		15	-1	100512244	521
ENSMUSG00000110248	antisense	Gm45615	ENSMUST00000210417	antisense		7	1	114086898	656
ENSMUSG00000085800	lincRNA	1700066O22Rik	ENSMUST00000133147	lincRNA		18	-1	57533739	552
ENSMUSG00000042190	protein_coding	Cmklr1	ENSMUST00000142854	protein_coding		5	-1	113643603	391
ENSMUSG00000026523	protein_coding	Wdr64	ENSMUST00000171939	protein_coding	alternative2	1	1	175698593	3823
ENSMUSG00000085800	lincRNA	1700066O22Rik	ENSMUST00000153122	lincRNA		18	-1	57533716	672
ENSMUSG00000042190	protein_coding	Cmklr1	ENSMUST00000151460	processed_transcript		5	-1	113650396	327
ENSMUSG00000085800	lincRNA	1700066O22Rik	ENSMUST00000150186	lincRNA		18	-1	57533723	752
ENSMUSG00000034855	protein_coding	Cxcl10	ENSMUST00000038816	protein_coding	principal1	5	-1	92348882	1094
ENSMUSG00000092530	unprocessed_pseudogene	Vmn2r-ps64	ENSMUST00000173690	unprocessed_pseudogene		7	1	85034027	523
ENSMUSG00000036256	protein_coding	Igfbp7	ENSMUST00000046746	protein_coding	alternative2	5	-1	77408041	1116
ENSMUSG00000092422	unprocessed_pseudogene	Vmn2r-ps65	ENSMUST00000173309	unprocessed_pseudogene		7	-1	85041996	220
ENSMUSG00000050855	protein_coding	Zfp940	ENSMUST00000085792	protein_coding	principal1	7	-1	29853648	2764
ENSMUSG00000060073	protein_coding	Psma3	ENSMUST00000160027	protein_coding	principal1	12	1	70974621	2846
ENSMUSG00000034855	protein_coding	Cxcl10	ENSMUST00000118006	protein_coding		5	-1	92348889	1353
ENSMUSG00000050855	protein_coding	Zfp940	ENSMUST00000128205	processed_transcript		7	-1	29853442	233
ENSMUSG00000108460	TEC	Gm39041	ENSMUST00000205557	TEC		7	1	79299025	3902
ENSMUSG00000020105	protein_coding	Lrig3	ENSMUST00000074807	protein_coding	principal1	10	1	125966253	4016
ENSMUSG00000090331	processed_pseudogene	Gm17199	ENSMUST00000097296	processed_pseudogene		7	-1	29856055	416
ENSMUSG00000034855	protein_coding	Cxcl10	ENSMUST00000138169	retained_intron		5	-1	92348882	344
ENSMUSG00000108521	TEC	Gm44639	ENSMUST00000205859	TEC		7	1	79277767	3009
ENSMUSG00000022702	protein_coding	Hira	ENSMUST00000144609	nonsense_mediated_decay		16	1	18877270	915
ENSMUSG00000097809	antisense	Gm26554	ENSMUST00000180801	antisense		7	1	29853085	845
ENSMUSG00000036256	protein_coding	Igfbp7	ENSMUST00000163898	protein_coding	principal4	5	-1	77408040	1200
ENSMUSG00000038280	protein_coding	Ostm1	ENSMUST00000147899	processed_transcript		10	1	42583822	797
ENSMUSG00000026659	protein_coding	Dusp12	ENSMUST00000170420	nonsense_mediated_decay		1	-1	170885457	1875
ENSMUSG00000112671	processed_pseudogene	Gm18242	ENSMUST00000218455	processed_pseudogene		12	-1	59351517	542
ENSMUSG00000061288	protein_coding	Taok3	ENSMUST00000111978	protein_coding	principal1	5	1	117120129	4467
ENSMUSG00000020105	protein_coding	Lrig3	ENSMUST00000218593	processed_transcript		10	1	125986722	224
ENSMUSG00000070436	protein_coding	Serpinh1	ENSMUST00000169437	protein_coding	principal1	7	-1	99353114	2274
ENSMUSG00000111978	processed_pseudogene	Gm48268	ENSMUST00000219779	processed_pseudogene		12	-1	59355609	791
ENSMUSG00000020105	protein_coding	Lrig3	ENSMUST00000218580	retained_intron		10	1	126011631	3506
ENSMUSG00000107238	processed_pseudogene	Gm42758	ENSMUST00000202146	processed_pseudogene		5	1	77318655	283
ENSMUSG00000081098	unprocessed_pseudogene	Gm12220	ENSMUST00000118476	unprocessed_pseudogene		11	-1	53929476	172
ENSMUSG00000061288	protein_coding	Taok3	ENSMUST00000125738	protein_coding		5	1	117126301	707
ENSMUSG00000020105	protein_coding	Lrig3	ENSMUST00000219974	retained_intron		10	1	126012425	1554
ENSMUSG00000078485	protein_coding	Plekhn1	ENSMUST00000218699	protein_coding		4	-1	156229717	3196
ENSMUSG00000060183	polymorphic_pseudogene	Cxcl11	ENSMUST00000122808	polymorphic_pseudogene		5	-1	92365485	3794
ENSMUSG00000106828	antisense	Gm34648	ENSMUST00000202460	antisense		5	1	77386599	338
ENSMUSG00000070436	protein_coding	Serpinh1	ENSMUST00000094154	protein_coding	principal1	7	-1	99353239	2215
ENSMUSG00000000411	protein_coding	Tssk3	ENSMUST00000000421	protein_coding	principal1	4	-1	129491022	1280
ENSMUSG00000055723	protein_coding	Rras2	ENSMUST00000069449	protein_coding	principal1	7	-1	114117781	2275
ENSMUSG00000022702	protein_coding	Hira	ENSMUST00000153397	nonsense_mediated_decay		16	1	18877270	1911
ENSMUSG00000061288	protein_coding	Taok3	ENSMUST00000128720	retained_intron		5	1	117133588	1961
ENSMUSG00000107471	processed_pseudogene	Gm44147	ENSMUST00000204658	processed_pseudogene		6	1	123150076	94
ENSMUSG00000092621	unprocessed_pseudogene	Vmn2r-ps66	ENSMUST00000173203	unprocessed_pseudogene		7	1	85053075	1256
ENSMUSG00000055723	protein_coding	Rras2	ENSMUST00000210075	nonsense_mediated_decay		7	-1	114117764	3534
ENSMUSG00000052537	protein_coding	Olfr198	ENSMUST00000208244	protein_coding	principal1	16	-1	59203533	2200
ENSMUSG00000022702	protein_coding	Hira	ENSMUST00000128321	nonsense_mediated_decay		16	1	18877412	1016
ENSMUSG00000060183	polymorphic_pseudogene	Cxcl11	ENSMUST00000077820	protein_coding	principal1	5	-1	92363277	1581
ENSMUSG00000070436	protein_coding	Serpinh1	ENSMUST00000208119	protein_coding	principal1	7	-1	99353114	2173
ENSMUSG00000022702	protein_coding	Hira	ENSMUST00000140748	processed_transcript		16	1	18923073	936
ENSMUSG00000082068	processed_pseudogene	Gm2673	ENSMUST00000120958	processed_pseudogene		5	1	92363904	1608
ENSMUSG00000052537	protein_coding	Olfr198	ENSMUST00000064452	protein_coding	principal1	16	-1	59202519	1054
ENSMUSG00000022702	protein_coding	Hira	ENSMUST00000131444	retained_intron		16	1	18925577	686
ENSMUSG00000061288	protein_coding	Taok3	ENSMUST00000092889	protein_coding	principal1	5	1	117133595	4354
ENSMUSG00000089809	protein_coding	Rasgef1b	ENSMUST00000031276	protein_coding	principal3	5	-1	99252927	2990
ENSMUSG00000110407	processed_pseudogene	Gm45454	ENSMUST00000211484	processed_pseudogene		7	-1	114209088	455
ENSMUSG00000022702	protein_coding	Hira	ENSMUST00000150799	processed_transcript		16	1	18933013	647
ENSMUSG00000078485	protein_coding	Plekhn1	ENSMUST00000105571	protein_coding		4	-1	156228542	2004
ENSMUSG00000022702	protein_coding	Hira	ENSMUST00000232419	processed_transcript		16	1	18941546	2098
ENSMUSG00000074996	protein_coding	Olfr199	ENSMUST00000214186	protein_coding	principal1	16	-1	59219767	2728
ENSMUSG00000082130	processed_pseudogene	Gm15799	ENSMUST00000120899	processed_pseudogene		16	1	18937401	289
ENSMUSG00000078485	protein_coding	Plekhn1	ENSMUST00000217885	protein_coding		4	-1	156228527	1982
ENSMUSG00000074996	protein_coding	Olfr199	ENSMUST00000099657	protein_coding	principal1	16	-1	59216615	931
ENSMUSG00000026659	protein_coding	Dusp12	ENSMUST00000171447	protein_coding		1	-1	170885199	846
ENSMUSG00000057697	protein_coding	Vmn1r53	ENSMUST00000076086	protein_coding	principal1	6	-1	90224438	1122
ENSMUSG00000070436	protein_coding	Serpinh1	ENSMUST00000207849	protein_coding	principal1	7	-1	99353114	2128
ENSMUSG00000061288	protein_coding	Taok3	ENSMUST00000126813	retained_intron		5	1	117133615	3930
ENSMUSG00000061843	transcribed_unprocessed_pseudogene	Vmn1r-ps32	ENSMUST00000237197	processed_transcript		6	1	90146431	3374
ENSMUSG00000061843	transcribed_unprocessed_pseudogene	Vmn1r-ps32	ENSMUST00000237433	processed_transcript		6	1	90146431	3600
ENSMUSG00000026659	protein_coding	Dusp12	ENSMUST00000163252	nonsense_mediated_decay		1	-1	170885395	1811
ENSMUSG00000089809	protein_coding	Rasgef1b	ENSMUST00000168092	protein_coding	alternative1	5	-1	99252927	2987
ENSMUSG00000061843	transcribed_unprocessed_pseudogene	Vmn1r-ps32	ENSMUST00000174389	transcribed_unprocessed_pseudogene		6	1	90153047	956
ENSMUSG00000061288	protein_coding	Taok3	ENSMUST00000145640	protein_coding		5	1	117133618	2017
ENSMUSG00000070436	protein_coding	Serpinh1	ENSMUST00000208749	protein_coding		7	-1	99353103	828
ENSMUSG00000060816	protein_coding	Vmn1r52	ENSMUST00000227100	protein_coding		6	1	90174808	2307
ENSMUSG00000060816	protein_coding	Vmn1r52	ENSMUST00000228385	protein_coding		6	1	90174808	2769
ENSMUSG00000061288	protein_coding	Taok3	ENSMUST00000153709	retained_intron		5	1	117133641	2057
ENSMUSG00000060816	protein_coding	Vmn1r52	ENSMUST00000227578	protein_coding		6	1	90174808	2370
ENSMUSG00000061288	protein_coding	Taok3	ENSMUST00000127814	protein_coding		5	1	117203265	717
ENSMUSG00000060816	protein_coding	Vmn1r52	ENSMUST00000226520	protein_coding	principal1	6	1	90174808	3125
ENSMUSG00000070436	protein_coding	Serpinh1	ENSMUST00000207989	protein_coding		7	-1	99353090	592
ENSMUSG00000060816	protein_coding	Vmn1r52	ENSMUST00000228394	protein_coding	principal1	6	1	90174808	3069
ENSMUSG00000071632	protein_coding	2510002D24Rik	ENSMUST00000055413	protein_coding	principal1	16	1	18836578	1281
ENSMUSG00000070436	protein_coding	Serpinh1	ENSMUST00000208292	protein_coding		7	-1	99352997	358
ENSMUSG00000089809	protein_coding	Rasgef1b	ENSMUST00000209346	protein_coding		5	-1	99728812	3028
ENSMUSG00000060816	protein_coding	Vmn1r52	ENSMUST00000227893	protein_coding	principal1	6	1	90174808	3108
ENSMUSG00000038280	protein_coding	Ostm1	ENSMUST00000144806	protein_coding		10	1	42583838	727
ENSMUSG00000060816	protein_coding	Vmn1r52	ENSMUST00000228665	protein_coding	principal1	6	1	90174808	3226
ENSMUSG00000089809	protein_coding	Rasgef1b	ENSMUST00000166484	protein_coding		5	-1	99243240	1296
ENSMUSG00000029054	protein_coding	Gabrd	ENSMUST00000150423	processed_transcript		4	-1	155398047	2707
ENSMUSG00000038280	protein_coding	Ostm1	ENSMUST00000105497	protein_coding		10	1	42583835	770
ENSMUSG00000071632	protein_coding	2510002D24Rik	ENSMUST00000123146	protein_coding		16	1	18836581	361
ENSMUSG00000060816	protein_coding	Vmn1r52	ENSMUST00000079832	protein_coding	principal1	6	1	90178716	930
ENSMUSG00000071632	protein_coding	2510002D24Rik	ENSMUST00000191388	protein_coding		16	1	18836581	995
ENSMUSG00000017485	protein_coding	Top2b	ENSMUST00000017629	protein_coding	principal1	14	1	16365179	10335
ENSMUSG00000071632	protein_coding	2510002D24Rik	ENSMUST00000190776	retained_intron		16	1	18836655	930
ENSMUSG00000061288	protein_coding	Taok3	ENSMUST00000111975	protein_coding		5	1	117240460	2172
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000227766	protein_coding	principal1	6	1	90122596	4218
ENSMUSG00000089809	protein_coding	Rasgef1b	ENSMUST00000166632	retained_intron		5	-1	99234066	721
ENSMUSG00000026659	protein_coding	Dusp12	ENSMUST00000027970	protein_coding	principal1	1	-1	170885540	1374
ENSMUSG00000083658	processed_pseudogene	Gm15798	ENSMUST00000120082	processed_pseudogene		16	-1	18944665	408
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000227109	protein_coding	principal1	6	1	90122596	4214
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000115371	protein_coding	alternative1	17	1	24414646	1646
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000226977	protein_coding	principal1	6	1	90122596	4357
ENSMUSG00000061288	protein_coding	Taok3	ENSMUST00000179276	protein_coding	principal1	5	1	117133588	4302
ENSMUSG00000089809	protein_coding	Rasgef1b	ENSMUST00000146396	protein_coding		5	-1	99729045	3339
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000228880	protein_coding	principal1	6	1	90122596	4353
ENSMUSG00000017485	protein_coding	Top2b	ENSMUST00000159987	retained_intron		14	1	16389577	671
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000227145	retained_intron		6	1	90122596	7681
ENSMUSG00000107764	processed_pseudogene	Gm5318	ENSMUST00000205249	processed_pseudogene		6	-1	128529725	406
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000227988	retained_intron		6	1	90122596	7685
ENSMUSG00000017485	protein_coding	Top2b	ENSMUST00000160501	protein_coding		14	1	16409908	689
ENSMUSG00000089809	protein_coding	Rasgef1b	ENSMUST00000161516	protein_coding		5	-1	99729062	2523
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000228433	retained_intron		6	1	90122596	7820
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000228590	retained_intron		6	1	90122596	7824
ENSMUSG00000026659	protein_coding	Dusp12	ENSMUST00000046476	nonsense_mediated_decay		1	-1	170885407	1121
ENSMUSG00000038280	protein_coding	Ostm1	ENSMUST00000040718	protein_coding	principal1	10	1	42678916	3006
ENSMUSG00000017485	protein_coding	Top2b	ENSMUST00000159302	processed_transcript		14	1	16412083	658
ENSMUSG00000017485	protein_coding	Top2b	ENSMUST00000161693	protein_coding		14	1	16413717	1044
ENSMUSG00000089809	protein_coding	Rasgef1b	ENSMUST00000142639	retained_intron		5	-1	99729065	2741
ENSMUSG00000017485	protein_coding	Top2b	ENSMUST00000224695	retained_intron		14	1	16423186	837
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000204801	protein_coding		6	1	65042583	602
ENSMUSG00000089809	protein_coding	Rasgef1b	ENSMUST00000160803	processed_transcript		5	-1	99728821	664
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000103093	protein_coding	alternative2	2	1	164832873	2534
ENSMUSG00000026659	protein_coding	Dusp12	ENSMUST00000166393	nonsense_mediated_decay		1	-1	170885396	911
ENSMUSG00000094198	IG_V_gene	Ighv1-50	ENSMUST00000103521	IG_V_gene	principal1	12	-1	115120219	390
ENSMUSG00000038280	protein_coding	Ostm1	ENSMUST00000154048	retained_intron		10	1	42678966	4387
ENSMUSG00000089809	protein_coding	Rasgef1b	ENSMUST00000161148	protein_coding		5	-1	99729056	2430
ENSMUSG00000017485	protein_coding	Top2b	ENSMUST00000163032	retained_intron		14	1	16423288	634
ENSMUSG00000026659	protein_coding	Dusp12	ENSMUST00000172042	protein_coding		1	-1	170885004	233
ENSMUSG00000078485	protein_coding	Plekhn1	ENSMUST00000105569	protein_coding	principal1	4	-1	156234857	3014
ENSMUSG00000017485	protein_coding	Top2b	ENSMUST00000224460	retained_intron		14	1	16425428	3401
ENSMUSG00000057370	processed_pseudogene	Gm8724	ENSMUST00000081668	processed_pseudogene		6	-1	128531400	483
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000174204	protein_coding	principal1	6	1	90122596	4025
ENSMUSG00000090146	antisense	4930405H06Rik	ENSMUST00000159244	antisense		5	1	99625836	791
ENSMUSG00000086434	antisense	Gm15200	ENSMUST00000149950	antisense		10	-1	42698518	410
ENSMUSG00000053925	processed_transcript	Gm9929	ENSMUST00000171747	processed_transcript		1	1	170868645	1671
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000227911	protein_coding	principal1	6	1	90122596	4021
ENSMUSG00000114243	antisense	Gm48163	ENSMUST00000225819	antisense		14	-1	16366268	241
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000133502	processed_transcript		2	1	164832887	378
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000234977	processed_transcript		17	1	24414651	1769
ENSMUSG00000104753	lincRNA	Gm35172	ENSMUST00000196037	lincRNA		5	1	99508389	2649
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000226542	protein_coding	principal1	6	1	90122596	4164
ENSMUSG00000104176	IG_V_pseudogene	Ighv1-51	ENSMUST00000192903	IG_V_pseudogene		12	-1	115131801	354
ENSMUSG00000104815	TR_V_pseudogene	Trav5-2	ENSMUST00000199855	TR_V_pseudogene		14	1	53614945	280
ENSMUSG00000089627	processed_pseudogene	Gm16228	ENSMUST00000162286	processed_pseudogene		5	-1	99611433	809
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000227876	protein_coding	principal1	6	1	90122596	4160
ENSMUSG00000090006	sense_intronic	Gm16227	ENSMUST00000160088	sense_intronic		5	-1	99510682	563
ENSMUSG00000062818	protein_coding	Vmn1r51	ENSMUST00000072859	protein_coding	principal1	6	1	90128424	2567
ENSMUSG00000095204	IG_V_gene	Ighv1-52	ENSMUST00000192554	IG_V_gene	principal5	12	-1	115145919	351
ENSMUSG00000095204	IG_V_gene	Ighv1-52	ENSMUST00000103522	IG_V_gene	alternative2	12	-1	115145919	348
ENSMUSG00000035310	protein_coding	Lin54	ENSMUST00000144030	nonsense_mediated_decay		5	-1	100500639	3733
ENSMUSG00000092247	transcribed_processed_pseudogene	Gm20426	ENSMUST00000204789	processed_transcript		6	-1	90232817	399
ENSMUSG00000092247	transcribed_processed_pseudogene	Gm20426	ENSMUST00000173657	transcribed_processed_pseudogene		6	-1	90232788	440
ENSMUSG00000060073	protein_coding	Psma3	ENSMUST00000160683	retained_intron		12	1	70974671	1027
ENSMUSG00000093894	IG_V_gene	Ighv1-53	ENSMUST00000103523	IG_V_gene	principal1	12	-1	115158835	351
ENSMUSG00000062546	protein_coding	V1ra8	ENSMUST00000078371	protein_coding	principal1	6	1	90202786	3081
ENSMUSG00000099908	protein_coding	Gm28539	ENSMUST00000190050	nonsense_mediated_decay	principal1	16	1	18836584	2982
ENSMUSG00000039202	protein_coding	Abhd2	ENSMUST00000037315	protein_coding	principal1	7	1	79273199	6877
ENSMUSG00000023143	protein_coding	Nagpa	ENSMUST00000147567	protein_coding	alternative2	16	-1	5204002	2230
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000088512	protein_coding	principal4	17	1	24414663	1816
ENSMUSG00000094505	IG_V_gene	Ighv8-6	ENSMUST00000193145	IG_V_gene		12	-1	115166220	354
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000103092	protein_coding	principal4	2	1	164832901	3646
ENSMUSG00000094505	IG_V_gene	Ighv8-6	ENSMUST00000103524	IG_V_gene	principal1	12	-1	115166077	301
ENSMUSG00000060073	protein_coding	Psma3	ENSMUST00000162626	nonsense_mediated_decay		12	1	70974671	1394
ENSMUSG00000039202	protein_coding	Abhd2	ENSMUST00000135333	processed_transcript		7	1	79273254	4426
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000151493	protein_coding		2	1	164832909	399
ENSMUSG00000060073	protein_coding	Psma3	ENSMUST00000160864	protein_coding		12	1	70974683	859
ENSMUSG00000060073	protein_coding	Psma3	ENSMUST00000162851	nonsense_mediated_decay		12	1	70974689	562
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000234729	retained_intron		17	1	24414694	1839
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000234089	processed_transcript		17	1	24418170	341
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000234154	retained_intron		17	1	24418492	501
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000147883	processed_transcript		2	1	164832926	442
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000234832	retained_intron		17	1	24420113	777
ENSMUSG00000060073	protein_coding	Psma3	ENSMUST00000161041	retained_intron		12	1	70974708	1022
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000234233	retained_intron		17	1	24421580	548
ENSMUSG00000023143	protein_coding	Nagpa	ENSMUST00000023911	protein_coding	principal2	16	-1	5204012	2143
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000127650	protein_coding		2	1	164832926	961
ENSMUSG00000060073	protein_coding	Psma3	ENSMUST00000071704	nonsense_mediated_decay		12	1	70974715	875
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000234630	retained_intron		17	1	24423871	1486
ENSMUSG00000034681	protein_coding	Rnps1	ENSMUST00000163717	protein_coding	principal4	17	1	24414675	1920
ENSMUSG00000060073	protein_coding	Psma3	ENSMUST00000163035	retained_intron		12	1	70974719	601
ENSMUSG00000026023	protein_coding	Cdk15	ENSMUST00000162906	processed_transcript		1	1	59298936	575
ENSMUSG00000023143	protein_coding	Nagpa	ENSMUST00000156450	processed_transcript		16	-1	5197765	703
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000146525	retained_intron		2	1	164833807	436
ENSMUSG00000060073	protein_coding	Psma3	ENSMUST00000162898	protein_coding		12	1	70986892	312
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000143780	protein_coding		2	1	164833815	659
ENSMUSG00000023143	protein_coding	Nagpa	ENSMUST00000144490	retained_intron		16	-1	5203477	516
ENSMUSG00000029054	protein_coding	Gabrd	ENSMUST00000030925	protein_coding	principal1	4	-1	155398112	1921
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000154245	protein_coding		5	1	92331827	714
ENSMUSG00000106503	lincRNA	Gm42827	ENSMUST00000197058	lincRNA		3	1	126226327	1515
ENSMUSG00000079007	protein_coding	Tcl1b4	ENSMUST00000222867	protein_coding	alternative2	12	1	105201957	1465
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000204347	protein_coding	alternative2	6	-1	94283917	7929
ENSMUSG00000117256	processed_pseudogene	Gm5497	ENSMUST00000233628	processed_pseudogene		17	1	63570903	346
ENSMUSG00000029054	protein_coding	Gabrd	ENSMUST00000129892	processed_transcript		4	-1	155398036	426
ENSMUSG00000117225	processed_pseudogene	Gm49862	ENSMUST00000233876	processed_pseudogene		17	-1	63622256	352
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000125462	protein_coding		5	1	92331830	824
ENSMUSG00000109537	unprocessed_pseudogene	Olfr200-ps1	ENSMUST00000207964	unprocessed_pseudogene		16	-1	59256000	874
ENSMUSG00000117060	processed_pseudogene	Gm7253	ENSMUST00000232736	processed_pseudogene		17	-1	63627954	338
ENSMUSG00000074995	protein_coding	Olfr201	ENSMUST00000216834	protein_coding	principal1	16	-1	59272632	3706
ENSMUSG00000085622	processed_transcript	3110056K07Rik	ENSMUST00000127129	antisense		12	-1	71015596	722
ENSMUSG00000024749	protein_coding	Tmc1	ENSMUST00000236437	protein_coding		19	-1	20814667	2432
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000135528	processed_transcript		5	1	92331841	1815
ENSMUSG00000074995	protein_coding	Olfr201	ENSMUST00000099656	protein_coding	principal1	16	-1	59269665	927
ENSMUSG00000079007	protein_coding	Tcl1b4	ENSMUST00000000718	protein_coding	principal2	12	1	105202422	1031
ENSMUSG00000112632	processed_pseudogene	Gm4510	ENSMUST00000218265	processed_pseudogene		10	-1	126186323	427
ENSMUSG00000034757	protein_coding	Tmub2	ENSMUST00000036376	protein_coding	principal1	11	1	102284931	1939
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000155061	retained_intron		2	1	164833847	651
ENSMUSG00000112387	lincRNA	1700021G15Rik	ENSMUST00000217671	lincRNA		10	1	126255117	528
ENSMUSG00000085622	processed_transcript	3110056K07Rik	ENSMUST00000136690	antisense		12	-1	71015832	1063
ENSMUSG00000034757	protein_coding	Tmub2	ENSMUST00000135551	processed_transcript		11	1	102284939	578
ENSMUSG00000085622	processed_transcript	3110056K07Rik	ENSMUST00000222159	retained_intron		12	-1	71015595	1790
ENSMUSG00000112482	lincRNA	1700025K04Rik	ENSMUST00000218075	lincRNA		10	1	126371975	1174
ENSMUSG00000034757	protein_coding	Tmub2	ENSMUST00000100387	protein_coding		11	1	102284939	1876
ENSMUSG00000100635	lincRNA	Gm29157	ENSMUST00000188753	lincRNA		1	1	43742915	612
ENSMUSG00000056564	protein_coding	Olfr324	ENSMUST00000214990	protein_coding	alternative2	11	1	58595114	3624
ENSMUSG00000056564	protein_coding	Olfr324	ENSMUST00000216965	protein_coding	alternative2	11	1	58595128	3691
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000119576	protein_coding	principal1	5	1	129715497	5061
ENSMUSG00000031398	protein_coding	Plxna3	ENSMUST00000136114	processed_transcript		X	1	74329066	427
ENSMUSG00000034757	protein_coding	Tmub2	ENSMUST00000156077	processed_transcript		11	1	102284951	359
ENSMUSG00000100764	antisense	Gm29155	ENSMUST00000186289	antisense		1	-1	43743895	216
ENSMUSG00000100764	antisense	Gm29155	ENSMUST00000185910	antisense		1	-1	43743852	269
ENSMUSG00000048810	protein_coding	Olfr202	ENSMUST00000201687	protein_coding	principal1	16	-1	59286708	1232
ENSMUSG00000048810	protein_coding	Olfr202	ENSMUST00000217485	protein_coding	principal1	16	-1	59286793	1321
ENSMUSG00000056564	protein_coding	Olfr324	ENSMUST00000054683	protein_coding	principal2	11	1	58597345	1122
ENSMUSG00000034757	protein_coding	Tmub2	ENSMUST00000156326	protein_coding	principal1	11	1	102285196	2249
ENSMUSG00000048810	protein_coding	Olfr202	ENSMUST00000049859	protein_coding	principal1	16	-1	59284495	924
ENSMUSG00000112435	processed_pseudogene	Gm47965	ENSMUST00000220216	processed_pseudogene		10	-1	126586804	115
ENSMUSG00000105345	lincRNA	BC030343	ENSMUST00000199606	lincRNA		5	1	143270075	2439
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000135909	retained_intron		11	-1	69346019	1882
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000042191	protein_coding	principal1	5	1	129715503	832
ENSMUSG00000024749	protein_coding	Tmc1	ENSMUST00000039500	protein_coding	principal1	19	-1	20954202	4073
ENSMUSG00000021578	protein_coding	Ccdc127	ENSMUST00000022063	protein_coding	principal1	13	1	74350309	9559
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000118420	protein_coding	principal1	5	1	129715504	843
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000122992	retained_intron		11	-1	69348610	2153
ENSMUSG00000024749	protein_coding	Tmc1	ENSMUST00000235605	retained_intron		19	-1	20814658	1645
ENSMUSG00000033400	protein_coding	Agl	ENSMUST00000162792	protein_coding	principal1	3	-1	116807417	6978
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000154358	protein_coding		5	1	129715509	514
ENSMUSG00000024749	protein_coding	Tmc1	ENSMUST00000235546	retained_intron		19	-1	20832375	2393
ENSMUSG00000017491	protein_coding	Rarb	ENSMUST00000063750	protein_coding	principal1	14	-1	16575543	3108
ENSMUSG00000044702	protein_coding	Palb2	ENSMUST00000106469	protein_coding	alternative2	7	-1	122132844	2559
ENSMUSG00000026051	protein_coding	Ecrg4	ENSMUST00000027217	protein_coding	principal1	1	1	43730602	902
ENSMUSG00000033400	protein_coding	Agl	ENSMUST00000160484	protein_coding		3	-1	116781250	5817
ENSMUSG00000118293	antisense	Gm32750	ENSMUST00000238088	antisense		19	1	20922392	520
ENSMUSG00000044702	protein_coding	Palb2	ENSMUST00000063587	protein_coding	alternative2	7	-1	122132909	1553
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000121339	protein_coding	principal1	5	1	129715511	2182
ENSMUSG00000100480	lincRNA	Gm29156	ENSMUST00000187764	lincRNA		1	-1	43746282	499
ENSMUSG00000017491	protein_coding	Rarb	ENSMUST00000225921	protein_coding		14	-1	16575827	2756
ENSMUSG00000025175	protein_coding	Fn3k	ENSMUST00000026175	protein_coding	principal1	11	1	121434913	1047
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000152721	processed_transcript		2	1	164833858	684
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000093769	protein_coding		6	-1	93913690	4598
ENSMUSG00000034552	protein_coding	Zswim2	ENSMUST00000038223	protein_coding	principal1	2	-1	83941226	2062
ENSMUSG00000025175	protein_coding	Fn3k	ENSMUST00000092302	protein_coding		11	1	121434967	1803
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000119604	protein_coding	principal1	5	1	129715516	1208
ENSMUSG00000021578	protein_coding	Ccdc127	ENSMUST00000160021	protein_coding		13	1	74350317	2682
ENSMUSG00000017491	protein_coding	Rarb	ENSMUST00000223576	nonsense_mediated_decay		14	-1	16575472	1052
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000130959	retained_intron		2	1	164834030	667
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000199999	retained_intron		5	1	129715518	1828
ENSMUSG00000034552	protein_coding	Zswim2	ENSMUST00000152829	protein_coding		2	-1	83941228	1226
ENSMUSG00000017491	protein_coding	Rarb	ENSMUST00000225594	nonsense_mediated_decay		14	-1	16575045	679
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000133077	retained_intron		2	1	164834030	923
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000128596	retained_intron		2	1	164834073	769
ENSMUSG00000034552	protein_coding	Zswim2	ENSMUST00000155127	processed_transcript		2	-1	83923679	190
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000136108	protein_coding		5	1	129715534	396
ENSMUSG00000033400	protein_coding	Agl	ENSMUST00000161336	nonsense_mediated_decay		3	-1	116808042	5365
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000203688	protein_coding		6	-1	93913554	4969
ENSMUSG00000017491	protein_coding	Rarb	ENSMUST00000223976	protein_coding		14	-1	16819156	708
ENSMUSG00000021578	protein_coding	Ccdc127	ENSMUST00000162672	protein_coding		13	1	74350344	677
ENSMUSG00000044702	protein_coding	Palb2	ENSMUST00000098068	protein_coding	principal3	7	-1	122132946	3750
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000143293	processed_transcript		2	1	164834310	522
ENSMUSG00000103665	processed_pseudogene	Gm9227	ENSMUST00000194733	processed_pseudogene		12	1	115175875	566
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000121813	protein_coding	principal1	5	1	129715558	868
ENSMUSG00000017491	protein_coding	Rarb	ENSMUST00000225356	retained_intron		14	-1	16575440	1876
ENSMUSG00000025175	protein_coding	Fn3k	ENSMUST00000103014	protein_coding		11	1	121434968	3841
ENSMUSG00000021578	protein_coding	Ccdc127	ENSMUST00000159931	nonsense_mediated_decay		13	1	74350345	784
ENSMUSG00000017491	protein_coding	Rarb	ENSMUST00000225245	protein_coding		14	-1	16819005	360
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000144580	retained_intron		2	1	164834473	766
ENSMUSG00000033400	protein_coding	Agl	ENSMUST00000159742	protein_coding		3	-1	116808129	4344
ENSMUSG00000017760	protein_coding	Ctsa	ENSMUST00000140213	retained_intron		2	1	164837182	380
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000119985	protein_coding	principal1	5	1	129715577	859
ENSMUSG00000115607	processed_pseudogene	Gm2803	ENSMUST00000226163	processed_pseudogene		15	-1	24724793	634
ENSMUSG00000021578	protein_coding	Ccdc127	ENSMUST00000223491	processed_transcript		13	1	74350351	369
ENSMUSG00000035112	protein_coding	Wnk4	ENSMUST00000139487	nonsense_mediated_decay		11	1	101260567	3462
ENSMUSG00000025369	protein_coding	Smarcc2	ENSMUST00000218228	protein_coding		10	1	128459248	603
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000105915	protein_coding	principal1	4	1	133011506	6341
ENSMUSG00000021578	protein_coding	Ccdc127	ENSMUST00000162376	protein_coding		13	1	74350365	762
ENSMUSG00000033400	protein_coding	Agl	ENSMUST00000159995	protein_coding		3	-1	116781750	1285
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000145682	processed_transcript		4	1	133011565	560
ENSMUSG00000034211	protein_coding	Mrps17	ENSMUST00000138812	protein_coding		5	1	129715697	305
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000204532	nonsense_mediated_decay		6	-1	93912963	4078
ENSMUSG00000094787	IG_V_gene	Ighv1-54	ENSMUST00000103525	IG_V_gene	principal1	12	-1	115194134	377
ENSMUSG00000044702	protein_coding	Palb2	ENSMUST00000154508	retained_intron		7	-1	122112040	709
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000156677	processed_transcript		4	1	133011838	2579
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000203519	protein_coding		6	-1	94283895	3920
ENSMUSG00000067231	protein_coding	Cyp2c65	ENSMUST00000087236	protein_coding	principal1	19	1	39061015	1928
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000205116	protein_coding		6	-1	93912504	745
ENSMUSG00000033400	protein_coding	Agl	ENSMUST00000162040	retained_intron		3	-1	116808031	1572
ENSMUSG00000020226	protein_coding	Slc5a4b	ENSMUST00000120757	protein_coding	principal1	10	-1	76110961	3202
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000204788	protein_coding		6	-1	93792539	537
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000044521	protein_coding	principal1	4	1	133012204	6105
ENSMUSG00000021579	protein_coding	Lrrc14b	ENSMUST00000022064	protein_coding	principal1	13	-1	74364005	2755
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000204167	protein_coding		6	-1	93913256	322
ENSMUSG00000026023	protein_coding	Cdk15	ENSMUST00000160662	protein_coding	alternative2	1	1	59256906	2108
ENSMUSG00000033400	protein_coding	Agl	ENSMUST00000159670	protein_coding		3	-1	116807851	722
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000105914	protein_coding	principal1	4	1	133039493	5898
ENSMUSG00000026023	protein_coding	Cdk15	ENSMUST00000162487	processed_transcript		1	1	59257128	343
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000203034	processed_transcript		6	-1	94283025	408
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000154646	processed_transcript		4	1	133011260	593
ENSMUSG00000112007	processed_pseudogene	Gm18119	ENSMUST00000219972	processed_pseudogene		10	-1	77653359	616
ENSMUSG00000086798	antisense	Gm16222	ENSMUST00000124320	antisense		10	1	76078617	1298
ENSMUSG00000033400	protein_coding	Agl	ENSMUST00000040603	protein_coding	principal1	3	-1	116808166	9625
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000031984	protein_coding	principal1	6	1	65042609	5168
ENSMUSG00000040528	protein_coding	Milr1	ENSMUST00000147326	protein_coding	principal3	11	1	106751226	1234
ENSMUSG00000053420	protein_coding	Gm4792	ENSMUST00000065826	protein_coding	principal1	10	-1	94298703	771
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000135548	processed_transcript		4	1	133011543	322
ENSMUSG00000112912	processed_pseudogene	Gm48160	ENSMUST00000220424	processed_pseudogene		10	-1	77681087	292
ENSMUSG00000070368	protein_coding	Prok1	ENSMUST00000197758	protein_coding		3	-1	107238652	3063
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000148518	processed_transcript		4	1	133066249	517
ENSMUSG00000038729	protein_coding	Pakap	ENSMUST00000098065	processed_transcript		4	1	57717657	343
ENSMUSG00000106128	TEC	Gm43520	ENSMUST00000197996	TEC		3	1	116818815	164
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000089317	protein_coding	principal3	6	-1	94283322	7209
ENSMUSG00000108421	lincRNA	Gm44718	ENSMUST00000206886	lincRNA		7	1	63765874	359
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000154482	processed_transcript		4	1	133012050	801
ENSMUSG00000106511	TEC	Gm43521	ENSMUST00000197838	TEC		3	-1	116822548	255
ENSMUSG00000070368	protein_coding	Prok1	ENSMUST00000198732	retained_intron		3	-1	107237261	3050
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000204111	retained_intron		6	1	65042621	466
ENSMUSG00000108700	processed_pseudogene	Gm7482	ENSMUST00000206446	processed_pseudogene		7	-1	63811330	505
ENSMUSG00000107198	lincRNA	Gm19619	ENSMUST00000200707	lincRNA		5	-1	91283421	3201
ENSMUSG00000045095	protein_coding	Magi1	ENSMUST00000055224	protein_coding		6	-1	94283322	7007
ENSMUSG00000026023	protein_coding	Cdk15	ENSMUST00000114248	protein_coding	principal2	1	1	59256907	1477
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000142524	processed_transcript		4	1	133012092	938
ENSMUSG00000108629	processed_pseudogene	Gm44720	ENSMUST00000206076	processed_pseudogene		7	1	63826978	260
ENSMUSG00000044702	protein_coding	Palb2	ENSMUST00000131657	nonsense_mediated_decay		7	-1	122124445	1350
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000205118	protein_coding		6	1	65042667	600
ENSMUSG00000115261	lincRNA	Gm35769	ENSMUST00000228215	lincRNA		15	-1	24907208	4287
ENSMUSG00000037692	protein_coding	Ahdc1	ENSMUST00000105916	protein_coding	principal1	4	1	133011506	6602
ENSMUSG00000110219	processed_pseudogene	Gm45317	ENSMUST00000210385	processed_pseudogene		8	1	85122728	223
ENSMUSG00000085950	lincRNA	Gm13589	ENSMUST00000146404	lincRNA		2	1	38424002	1675
ENSMUSG00000066042	protein_coding	Med18	ENSMUST00000102567	protein_coding	principal1	4	-1	132463921	1675
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000204696	protein_coding		6	1	65042836	734
ENSMUSG00000097452	lincRNA	Gm2824	ENSMUST00000180955	lincRNA		15	-1	25027358	3522
ENSMUSG00000084124	processed_pseudogene	Gm13588	ENSMUST00000120026	processed_pseudogene		2	1	38490104	135
ENSMUSG00000097452	lincRNA	Gm2824	ENSMUST00000180696	lincRNA		15	-1	25027337	2054
ENSMUSG00000009733	protein_coding	Tfcp2	ENSMUST00000229696	protein_coding	principal2	15	-1	100552008	3302
ENSMUSG00000070368	protein_coding	Prok1	ENSMUST00000049852	protein_coding	principal1	3	-1	107239707	813
ENSMUSG00000044702	protein_coding	Palb2	ENSMUST00000142952	nonsense_mediated_decay		7	-1	122132888	3181
ENSMUSG00000050192	protein_coding	Eif5a2	ENSMUST00000060500	protein_coding	principal1	3	1	28781276	5027
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000204114	nonsense_mediated_decay		6	1	65042858	472
ENSMUSG00000110617	processed_pseudogene	Gm5910	ENSMUST00000211819	processed_pseudogene		8	-1	83479216	1746
ENSMUSG00000037145	protein_coding	2210407C18Rik	ENSMUST00000108821	protein_coding	principal1	11	-1	58616075	998
ENSMUSG00000066042	protein_coding	Med18	ENSMUST00000123604	protein_coding		4	-1	132463331	626
ENSMUSG00000074194	protein_coding	Zfp791	ENSMUST00000211109	protein_coding	principal1	8	-1	85123095	2946
ENSMUSG00000097452	lincRNA	Gm2824	ENSMUST00000226189	lincRNA		15	-1	25018394	1228
ENSMUSG00000044702	protein_coding	Palb2	ENSMUST00000106468	protein_coding		7	-1	122132917	3304
ENSMUSG00000107883	TEC	Gm44062	ENSMUST00000203312	TEC		2	1	38500192	4857
ENSMUSG00000074194	protein_coding	Zfp791	ENSMUST00000098550	protein_coding	principal1	8	-1	85119637	1587
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000204955	nonsense_mediated_decay		6	1	65042866	739
ENSMUSG00000037145	protein_coding	2210407C18Rik	ENSMUST00000126695	processed_transcript		11	-1	58613485	651
ENSMUSG00000009733	protein_coding	Tfcp2	ENSMUST00000009877	protein_coding	alternative1	15	-1	100551981	3220
ENSMUSG00000110448	processed_pseudogene	Gm33242	ENSMUST00000212130	processed_pseudogene		8	-1	83490799	1057
ENSMUSG00000094613	protein_coding	A630076J17Rik	ENSMUST00000179399	protein_coding	principal1	3	1	107230614	1358
ENSMUSG00000110386	lincRNA	Gm42031	ENSMUST00000209823	lincRNA		8	-1	85132289	1885
ENSMUSG00000009733	protein_coding	Tfcp2	ENSMUST00000229581	protein_coding		15	-1	100551787	1903
ENSMUSG00000035152	protein_coding	Ap2b1	ENSMUST00000018875	protein_coding	principal4	11	1	83302483	5625
ENSMUSG00000042655	protein_coding	Shisal2b	ENSMUST00000043061	protein_coding	principal1	13	-1	104863893	1310
ENSMUSG00000094125	protein_coding	Gm13698	ENSMUST00000179192	protein_coding	principal1	2	1	83955693	2493
ENSMUSG00000020130	protein_coding	Tbc1d15	ENSMUST00000020339	protein_coding	principal1	10	-1	115251467	3752
ENSMUSG00000044702	protein_coding	Palb2	ENSMUST00000130149	retained_intron		7	-1	122132919	3216
ENSMUSG00000110200	processed_pseudogene	Gm45316	ENSMUST00000210128	processed_pseudogene		8	1	85135765	162
ENSMUSG00000094125	protein_coding	Gm13698	ENSMUST00000178325	protein_coding		2	1	83956398	732
ENSMUSG00000044702	protein_coding	Palb2	ENSMUST00000205352	retained_intron		7	-1	122132985	2145
ENSMUSG00000037145	protein_coding	2210407C18Rik	ENSMUST00000048801	protein_coding	principal1	11	-1	58613492	876
ENSMUSG00000020130	protein_coding	Tbc1d15	ENSMUST00000217843	retained_intron		10	-1	115221708	1641
ENSMUSG00000089631	processed_pseudogene	Gm16326	ENSMUST00000162843	processed_pseudogene		7	1	122131092	414
ENSMUSG00000047286	protein_coding	Olfr370	ENSMUST00000214156	protein_coding	principal1	8	1	83535780	2475
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000164091	nonsense_mediated_decay		6	1	42286767	2838
ENSMUSG00000042655	protein_coding	Shisal2b	ENSMUST00000223913	processed_transcript		13	-1	104863312	507
ENSMUSG00000094336	protein_coding	Gm13693	ENSMUST00000178960	protein_coding	principal1	2	1	83961503	2493
ENSMUSG00000042655	protein_coding	Shisal2b	ENSMUST00000225969	processed_transcript		13	-1	104863419	443
ENSMUSG00000020130	protein_coding	Tbc1d15	ENSMUST00000217886	retained_intron		10	-1	115209688	641
ENSMUSG00000094336	protein_coding	Gm13693	ENSMUST00000179448	protein_coding		2	1	83962208	732
ENSMUSG00000096656	TR_V_gene	Trav12-2	ENSMUST00000180972	TR_V_gene	principal1	14	1	53616315	426
ENSMUSG00000037005	protein_coding	Xpnpep2	ENSMUST00000077775	protein_coding	principal1	X	1	48108725	3498
ENSMUSG00000047286	protein_coding	Olfr370	ENSMUST00000209408	protein_coding	principal1	8	1	83535780	4600
ENSMUSG00000009733	protein_coding	Tfcp2	ENSMUST00000230363	retained_intron		15	-1	100525733	586
ENSMUSG00000114326	processed_pseudogene	Gm4938	ENSMUST00000171334	processed_pseudogene		13	1	104918780	397
ENSMUSG00000035152	protein_coding	Ap2b1	ENSMUST00000132178	retained_intron		11	1	83302703	3576
ENSMUSG00000009733	protein_coding	Tfcp2	ENSMUST00000229265	protein_coding		15	-1	100551551	485
ENSMUSG00000047286	protein_coding	Olfr370	ENSMUST00000058609	protein_coding	principal1	8	1	83541093	1096
ENSMUSG00000096729	protein_coding	Gm13695	ENSMUST00000099951	protein_coding	principal1	2	1	83967313	2493
ENSMUSG00000037005	protein_coding	Xpnpep2	ENSMUST00000114998	protein_coding		X	1	48108919	3017
ENSMUSG00000035152	protein_coding	Ap2b1	ENSMUST00000176430	protein_coding		11	1	83302734	3596
ENSMUSG00000020130	protein_coding	Tbc1d15	ENSMUST00000219274	processed_transcript		10	-1	115251253	492
ENSMUSG00000009733	protein_coding	Tfcp2	ENSMUST00000230039	retained_intron		15	-1	100551579	2173
ENSMUSG00000009733	protein_coding	Tfcp2	ENSMUST00000230254	processed_transcript		15	-1	100551774	2720
ENSMUSG00000096729	protein_coding	Gm13695	ENSMUST00000179504	protein_coding		2	1	83968018	732
ENSMUSG00000095958	TR_V_gene	Trav12-3	ENSMUST00000103657	TR_V_gene	principal1	14	1	53621657	442
ENSMUSG00000037005	protein_coding	Xpnpep2	ENSMUST00000129677	processed_transcript		X	1	48108921	380
ENSMUSG00000083120	unprocessed_pseudogene	Gm15854	ENSMUST00000118879	unprocessed_pseudogene		6	-1	129992844	808
ENSMUSG00000009733	protein_coding	Tfcp2	ENSMUST00000231138	protein_coding		15	-1	100551789	371
ENSMUSG00000104518	TEC	Gm37162	ENSMUST00000191708	TEC		1	-1	13059951	551
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000203756	processed_transcript		6	1	65042879	2821
ENSMUSG00000078964	protein_coding	Ces1b	ENSMUST00000109582	protein_coding	principal1	8	-1	93080017	1964
ENSMUSG00000037005	protein_coding	Xpnpep2	ENSMUST00000115000	protein_coding		X	1	48108929	3184
ENSMUSG00000110478	processed_pseudogene	Gm18000	ENSMUST00000212153	processed_pseudogene		8	1	83546440	800
ENSMUSG00000100266	processed_pseudogene	Gm5372	ENSMUST00000187540	processed_pseudogene		9	1	103888009	409
ENSMUSG00000076846	TR_V_gene	Trav13-2	ENSMUST00000103658	TR_V_gene	principal1	14	1	53634829	390
ENSMUSG00000040528	protein_coding	Milr1	ENSMUST00000182896	protein_coding	alternative2	11	1	106751240	918
ENSMUSG00000035152	protein_coding	Ap2b1	ENSMUST00000065692	protein_coding	alternative1	11	1	83302774	3269
ENSMUSG00000069620	processed_pseudogene	Gm5250	ENSMUST00000059065	processed_pseudogene		1	1	13062025	321
ENSMUSG00000037005	protein_coding	Xpnpep2	ENSMUST00000156654	processed_transcript		X	1	48127744	347
ENSMUSG00000095589	IG_V_gene	Ighv1-55	ENSMUST00000103526	IG_V_gene	principal1	12	-1	115208591	415
ENSMUSG00000040528	protein_coding	Milr1	ENSMUST00000182908	protein_coding	alternative2	11	1	106751240	811
ENSMUSG00000095711	TR_V_gene	Trav14-2	ENSMUST00000179267	TR_V_gene		14	1	53640701	387
ENSMUSG00000095711	TR_V_gene	Trav14-2	ENSMUST00000184874	TR_V_gene	principal1	14	1	53640946	276
ENSMUSG00000035152	protein_coding	Ap2b1	ENSMUST00000142680	protein_coding		11	1	83302952	686
ENSMUSG00000099498	lincRNA	Gm29283	ENSMUST00000187394	lincRNA		1	1	13068838	288
ENSMUSG00000096484	protein_coding	Gm13696	ENSMUST00000180347	protein_coding	principal1	2	1	83973123	2493
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000170028	nonsense_mediated_decay		6	1	42286856	2817
ENSMUSG00000035152	protein_coding	Ap2b1	ENSMUST00000176523	protein_coding		11	1	83308238	2742
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000163936	protein_coding		6	1	42286856	2770
ENSMUSG00000096484	protein_coding	Gm13696	ENSMUST00000179311	protein_coding		2	1	83973828	732
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000165780	nonsense_mediated_decay		6	1	42286856	2899
ENSMUSG00000103737	processed_pseudogene	Gm7142	ENSMUST00000194232	processed_pseudogene		12	1	115224859	586
ENSMUSG00000040528	protein_coding	Milr1	ENSMUST00000086353	protein_coding	principal3	11	1	106751240	1348
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000169024	nonsense_mediated_decay		6	1	42286856	3029
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000204620	nonsense_mediated_decay		6	1	65043213	4179
ENSMUSG00000082361	protein_coding	Btc	ENSMUST00000121044	protein_coding	principal1	5	-1	91402994	2876
ENSMUSG00000038729	protein_coding	Pakap	ENSMUST00000107600	protein_coding		4	1	57742095	7231
ENSMUSG00000096337	protein_coding	Gm13694	ENSMUST00000178533	protein_coding	principal1	2	1	83978933	2493
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000205092	retained_intron		6	1	65052783	643
ENSMUSG00000096337	protein_coding	Gm13694	ENSMUST00000178655	protein_coding		2	1	83979638	732
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000168660	nonsense_mediated_decay		6	1	42286866	2744
ENSMUSG00000095332	antisense	Gm9821	ENSMUST00000238356	antisense		2	1	91945703	2032
ENSMUSG00000074781	protein_coding	Ube2n	ENSMUST00000099329	protein_coding	principal1	10	1	95515145	3867
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000204420	processed_transcript		6	1	65057614	635
ENSMUSG00000098708	processed_transcript	Gm27252	ENSMUST00000183782	lincRNA		7	1	63896533	689
ENSMUSG00000095332	antisense	Gm9821	ENSMUST00000178895	antisense		2	1	91945703	1953
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000203411	nonsense_mediated_decay		6	1	65075023	726
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000114684	processed_transcript		6	1	42298900	3504
ENSMUSG00000083995	processed_pseudogene	Gm12808	ENSMUST00000120597	processed_pseudogene		4	-1	109754817	404
ENSMUSG00000098708	processed_transcript	Gm27252	ENSMUST00000184360	antisense		7	1	63897974	521
ENSMUSG00000074781	protein_coding	Ube2n	ENSMUST00000219381	retained_intron		10	1	95515157	699
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000204165	retained_intron		6	1	65077348	3062
ENSMUSG00000095824	protein_coding	Gm13697	ENSMUST00000099948	protein_coding	principal1	2	1	83984743	2493
ENSMUSG00000040528	protein_coding	Milr1	ENSMUST00000183111	protein_coding	alternative2	11	1	106751265	982
ENSMUSG00000082361	protein_coding	Btc	ENSMUST00000201252	retained_intron		5	-1	91402822	4027
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000163235	nonsense_mediated_decay		6	1	42310145	417
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000204170	retained_intron		6	1	65095692	643
ENSMUSG00000095824	protein_coding	Gm13697	ENSMUST00000179552	protein_coding		2	1	83985448	732
ENSMUSG00000029920	protein_coding	Smarcad1	ENSMUST00000203104	retained_intron		6	1	65107453	2526
ENSMUSG00000029862	protein_coding	Clcn1	ENSMUST00000169902	retained_intron		6	1	42312492	774
ENSMUSG00000082361	protein_coding	Btc	ENSMUST00000200860	nonsense_mediated_decay		5	-1	91402860	966
ENSMUSG00000074781	protein_coding	Ube2n	ENSMUST00000220127	nonsense_mediated_decay		10	1	95515185	1103
ENSMUSG00000082361	protein_coding	Btc	ENSMUST00000201090	processed_transcript		5	-1	91377021	410
ENSMUSG00000038729	protein_coding	Pakap	ENSMUST00000124581	protein_coding		4	1	57782180	784
ENSMUSG00000113968	processed_pseudogene	Gm48813	ENSMUST00000222507	processed_pseudogene		12	1	38707869	702
ENSMUSG00000074781	protein_coding	Ube2n	ENSMUST00000220428	processed_transcript		10	1	95515654	512
ENSMUSG00000094862	IG_V_gene	Ighv1-56	ENSMUST00000194071	IG_V_gene		12	-1	115243235	351
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000217020	lincRNA		9	-1	103945815	847
ENSMUSG00000040528	protein_coding	Milr1	ENSMUST00000106794	protein_coding	alternative2	11	1	106751268	1514
ENSMUSG00000094862	IG_V_gene	Ighv1-56	ENSMUST00000103527	IG_V_gene	principal1	12	-1	115243095	294
ENSMUSG00000113520	processed_pseudogene	Gm4257	ENSMUST00000222877	processed_pseudogene		12	-1	38742210	513
ENSMUSG00000038729	protein_coding	Pakap	ENSMUST00000238994	protein_coding		4	1	57821050	1177
ENSMUSG00000095061	protein_coding	E030018B13Rik	ENSMUST00000177638	protein_coding	principal1	7	1	63916857	1015
ENSMUSG00000074781	protein_coding	Ube2n	ENSMUST00000219741	processed_transcript		10	1	95541392	759
ENSMUSG00000035112	protein_coding	Wnk4	ENSMUST00000103108	protein_coding	principal1	11	1	101260598	4117
ENSMUSG00000112128	unprocessed_pseudogene	Gm19217	ENSMUST00000218238	unprocessed_pseudogene		10	1	76133434	328
ENSMUSG00000074781	protein_coding	Ube2n	ENSMUST00000217757	processed_transcript		10	1	95541513	330
ENSMUSG00000079247	protein_coding	Gm13691	ENSMUST00000099947	protein_coding	principal1	2	1	83990553	2493
ENSMUSG00000038729	protein_coding	Pakap	ENSMUST00000132497	protein_coding		4	1	57829245	671
ENSMUSG00000103827	lincRNA	Gm32950	ENSMUST00000193336	lincRNA		3	-1	28805336	232
ENSMUSG00000084359	processed_pseudogene	Gm13692	ENSMUST00000120774	processed_pseudogene		2	-1	84034613	371
ENSMUSG00000035112	protein_coding	Wnk4	ENSMUST00000147741	nonsense_mediated_decay		11	1	101260655	3836
ENSMUSG00000062687	protein_coding	Cks1brt	ENSMUST00000211617	protein_coding	principal1	8	1	85151924	2397
ENSMUSG00000081980	processed_pseudogene	Gm13702	ENSMUST00000118542	processed_pseudogene		2	1	84144890	825
ENSMUSG00000040528	protein_coding	Milr1	ENSMUST00000182023	nonsense_mediated_decay		11	1	106751268	1637
ENSMUSG00000035112	protein_coding	Wnk4	ENSMUST00000170056	nonsense_mediated_decay		11	1	101265308	850
ENSMUSG00000084198	unprocessed_pseudogene	Gm13711	ENSMUST00000119708	unprocessed_pseudogene		2	-1	84318311	453
ENSMUSG00000062687	protein_coding	Cks1brt	ENSMUST00000076896	protein_coding	principal1	8	1	85171322	2301
ENSMUSG00000040528	protein_coding	Milr1	ENSMUST00000182479	protein_coding		11	1	106754943	769
ENSMUSG00000103439	processed_pseudogene	Gm7019	ENSMUST00000194122	processed_pseudogene		12	-1	115244553	369
ENSMUSG00000102381	IG_V_pseudogene	Ighv8-7	ENSMUST00000194349	IG_V_pseudogene		12	-1	115258432	297
ENSMUSG00000035112	protein_coding	Wnk4	ENSMUST00000170372	protein_coding		11	1	101276646	462
ENSMUSG00000051952	protein_coding	Olfr371	ENSMUST00000218663	protein_coding	principal1	8	1	85225988	1162
ENSMUSG00000085083	antisense	Gm11615	ENSMUST00000156205	antisense		11	-1	101266303	818
ENSMUSG00000051952	protein_coding	Olfr371	ENSMUST00000070849	protein_coding	principal1	8	1	85230497	939
ENSMUSG00000110556	TEC	Gm45762	ENSMUST00000212863	TEC		8	-1	95778530	2619
ENSMUSG00000027073	protein_coding	Prg2	ENSMUST00000028467	protein_coding	principal1	2	1	84980461	838
ENSMUSG00000102295	IG_V_pseudogene	Ighv1-57	ENSMUST00000194898	IG_V_pseudogene		12	-1	115268856	349
ENSMUSG00000112208	lincRNA	Gm40797	ENSMUST00000219762	lincRNA		10	1	126663998	385
ENSMUSG00000052040	protein_coding	Klf13	ENSMUST00000063694	protein_coding	principal1	7	-1	63938915	6396
ENSMUSG00000103168	lincRNA	Gm30948	ENSMUST00000195683	lincRNA		12	1	115262684	4827
ENSMUSG00000033306	protein_coding	Lpp	ENSMUST00000038053	protein_coding	principal1	16	1	24393540	15459
ENSMUSG00000047643	processed_pseudogene	Gm5454	ENSMUST00000052030	processed_pseudogene		13	1	103356252	1453
ENSMUSG00000024863	protein_coding	Mbl2	ENSMUST00000025797	protein_coding	principal1	19	1	30232942	1089
ENSMUSG00000052040	protein_coding	Klf13	ENSMUST00000185175	protein_coding		7	-1	63936301	487
ENSMUSG00000031398	protein_coding	Plxna3	ENSMUST00000004326	protein_coding	principal1	X	1	74329066	6943
ENSMUSG00000033306	protein_coding	Lpp	ENSMUST00000231279	retained_intron		16	1	24393738	4306
ENSMUSG00000052040	protein_coding	Klf13	ENSMUST00000183817	protein_coding		7	-1	63924870	599
ENSMUSG00000095940	processed_pseudogene	Gm16416	ENSMUST00000179660	processed_pseudogene		13	1	103397109	483
ENSMUSG00000052040	protein_coding	Klf13	ENSMUST00000183907	retained_intron		7	-1	63936332	934
ENSMUSG00000081052	processed_pseudogene	Gm6305	ENSMUST00000121027	processed_pseudogene		16	-1	11191265	1012
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000023631	protein_coding	alternative2	16	-1	96082447	8209
ENSMUSG00000033306	protein_coding	Lpp	ENSMUST00000078988	protein_coding	principal1	16	1	24448091	3894
ENSMUSG00000080790	processed_pseudogene	Gm7638	ENSMUST00000121348	processed_pseudogene		16	-1	11186099	967
ENSMUSG00000116682	TEC	Gm49789	ENSMUST00000231804	TEC		17	1	27437529	499
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000232755	protein_coding	alternative2	16	-1	96082447	9843
ENSMUSG00000116568	TEC	Gm49790	ENSMUST00000231818	TEC		17	-1	27468889	398
ENSMUSG00000096959	lincRNA	4930509G22Rik	ENSMUST00000181206	lincRNA		16	1	11178176	2481
ENSMUSG00000038070	protein_coding	Cntln	ENSMUST00000047023	protein_coding	alternative2	4	1	84884309	5528
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214481	lincRNA		9	-1	103960139	1268
ENSMUSG00000020718	protein_coding	Polg2	ENSMUST00000021060	protein_coding	principal1	11	-1	106779515	1506
ENSMUSG00000031131	protein_coding	Vgll1	ENSMUST00000033465	protein_coding	principal1	X	1	57088106	2281
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000189536	lincRNA		9	-1	103960135	893
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000232694	nonsense_mediated_decay		16	-1	96047160	3834
ENSMUSG00000038070	protein_coding	Cntln	ENSMUST00000107190	protein_coding	alternative2	4	1	85098104	2237
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000217229	lincRNA		9	-1	103920685	1207
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214234	lincRNA		9	-1	103945804	761
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213824	lincRNA		9	-1	103945804	1069
ENSMUSG00000033306	protein_coding	Lpp	ENSMUST00000115314	protein_coding		16	1	24721855	1808
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000216200	lincRNA		9	-1	103945804	575
ENSMUSG00000038070	protein_coding	Cntln	ENSMUST00000102819	protein_coding	principal3	4	1	84884404	2239
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215243	lincRNA		9	-1	103945851	714
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214506	lincRNA		9	-1	103960106	971
ENSMUSG00000031131	protein_coding	Vgll1	ENSMUST00000141936	protein_coding		X	1	57099586	591
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000188920	lincRNA		9	-1	103960107	606
ENSMUSG00000021598	protein_coding	Med10	ENSMUST00000223376	protein_coding		13	1	69802395	610
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214775	lincRNA		9	-1	103960107	693
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215433	lincRNA		9	-1	103960113	962
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000232993	protein_coding		16	-1	96009013	1193
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214068	lincRNA		9	-1	103960129	999
ENSMUSG00000021598	protein_coding	Med10	ENSMUST00000222387	protein_coding		13	1	69802417	558
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213447	lincRNA		9	-1	103960130	887
ENSMUSG00000031131	protein_coding	Vgll1	ENSMUST00000114746	protein_coding	principal1	X	1	57089374	2151
ENSMUSG00000033306	protein_coding	Lpp	ENSMUST00000232546	nonsense_mediated_decay		16	1	24845175	601
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000217560	lincRNA		9	-1	103960135	1733
ENSMUSG00000047228	protein_coding	A2ml1	ENSMUST00000203291	retained_intron		6	-1	128543494	700
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214020	lincRNA		9	-1	103960135	985
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000233883	processed_transcript		16	-1	96009252	716
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214974	lincRNA		9	-1	103960135	959
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000217108	lincRNA		9	-1	103960135	796
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215646	lincRNA		9	-1	103960139	1271
ENSMUSG00000031131	protein_coding	Vgll1	ENSMUST00000114745	protein_coding	principal1	X	1	57089312	1218
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000233610	retained_intron		16	-1	96009159	3237
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000216716	lincRNA		9	-1	103960139	707
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000217473	lincRNA		9	-1	103960139	613
ENSMUSG00000115409	unprocessed_pseudogene	Gm8139	ENSMUST00000227680	unprocessed_pseudogene		15	-1	9261327	1208
ENSMUSG00000031398	protein_coding	Plxna3	ENSMUST00000154062	retained_intron		X	1	74332457	5561
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000216956	lincRNA		9	-1	103960139	887
ENSMUSG00000038070	protein_coding	Cntln	ENSMUST00000169371	protein_coding	alternative2	4	1	84884465	5365
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000232794	retained_intron		16	-1	96011877	632
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215443	lincRNA		9	-1	103960139	740
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000233084	protein_coding		16	-1	96027406	1130
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213780	lincRNA		9	-1	103960165	1062
ENSMUSG00000031398	protein_coding	Plxna3	ENSMUST00000142236	retained_intron		X	1	74333746	791
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000232801	retained_intron		16	-1	96017805	378
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000216357	lincRNA		9	-1	103960323	1286
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000233699	retained_intron		16	-1	96019871	235
ENSMUSG00000038729	protein_coding	Pakap	ENSMUST00000102903	protein_coding		4	1	57845247	6650
ENSMUSG00000110265	processed_pseudogene	Gm45331	ENSMUST00000209868	processed_pseudogene		7	1	105326661	554
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000217161	lincRNA		9	-1	103960348	817
ENSMUSG00000080303	processed_pseudogene	Gm12419	ENSMUST00000116649	processed_pseudogene		4	-1	84924189	636
ENSMUSG00000031398	protein_coding	Plxna3	ENSMUST00000152376	retained_intron		X	1	74334326	806
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213655	lincRNA		9	-1	103960138	1499
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214530	lincRNA		9	-1	103960153	1075
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000233270	retained_intron		16	-1	96035630	2511
ENSMUSG00000083139	processed_pseudogene	Gm12418	ENSMUST00000118116	processed_pseudogene		4	1	84915896	942
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215120	lincRNA		9	-1	103960323	1367
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000233074	protein_coding		16	-1	96061099	1806
ENSMUSG00000076848	TR_V_gene	Trav15-2-dv6-2	ENSMUST00000103660	TR_V_gene	principal1	14	1	53649404	370
ENSMUSG00000030218	protein_coding	Mgp	ENSMUST00000032342	protein_coding	principal1	6	-1	136875823	617
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000216927	lincRNA		9	-1	103960376	936
ENSMUSG00000031398	protein_coding	Plxna3	ENSMUST00000139323	retained_intron		X	1	74335232	749
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000233976	nonsense_mediated_decay		16	-1	96061064	1595
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000216862	lincRNA		9	-1	103945815	985
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213621	lincRNA		9	-1	103960135	870
ENSMUSG00000031398	protein_coding	Plxna3	ENSMUST00000152317	retained_intron		X	1	74338266	735
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000216997	lincRNA		9	-1	103960137	965
ENSMUSG00000105493	processed_pseudogene	Gm43551	ENSMUST00000197221	processed_pseudogene		14	-1	53663780	440
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214266	lincRNA		9	-1	103960082	763
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214189	lincRNA		9	-1	103960131	678
ENSMUSG00000031398	protein_coding	Plxna3	ENSMUST00000148726	retained_intron		X	1	74338349	600
ENSMUSG00000103034	protein_coding	Gm8797	ENSMUST00000192045	protein_coding	principal1	3	1	5750806	490
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215439	lincRNA		9	-1	103960137	1008
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000232898	retained_intron		16	-1	96047443	663
ENSMUSG00000030218	protein_coding	Mgp	ENSMUST00000203103	retained_intron		6	-1	136875781	715
ENSMUSG00000043880	protein_coding	Olfr323	ENSMUST00000214132	protein_coding	principal1	11	-1	58630501	1916
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000217380	lincRNA		9	-1	103960137	606
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215800	lincRNA		9	-1	103960366	741
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214480	lincRNA		9	-1	103931745	606
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214866	lincRNA		9	-1	103960135	1283
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215019	lincRNA		9	-1	103960107	770
ENSMUSG00000031398	protein_coding	Plxna3	ENSMUST00000137484	retained_intron		X	1	74341587	984
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213151	lincRNA		9	-1	103960113	905
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000217309	lincRNA		9	-1	103960113	778
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000216494	lincRNA		9	-1	103960135	1106
ENSMUSG00000043880	protein_coding	Olfr323	ENSMUST00000203173	protein_coding		11	-1	58626041	412
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000217029	lincRNA		9	-1	103960139	856
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215250	lincRNA		9	-1	103960092	961
ENSMUSG00000021598	protein_coding	Med10	ENSMUST00000022089	protein_coding	principal1	13	1	69809841	913
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000216066	lincRNA		9	-1	103960135	682
ENSMUSG00000043880	protein_coding	Olfr323	ENSMUST00000070804	protein_coding	principal1	11	-1	58626044	972
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213325	lincRNA		9	-1	103960150	1112
ENSMUSG00000038010	protein_coding	Ccdc138	ENSMUST00000036576	protein_coding	principal1	10	1	58497948	2455
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214292	lincRNA		9	-1	103960107	1192
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214629	lincRNA		9	-1	103960114	1088
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213410	lincRNA		9	-1	103960114	1180
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213614	lincRNA		9	-1	103960139	878
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213581	lincRNA		9	-1	103960139	942
ENSMUSG00000021598	protein_coding	Med10	ENSMUST00000221045	retained_intron		13	1	69809891	4197
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215272	lincRNA		9	-1	103960147	750
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000217242	lincRNA		9	-1	103960150	374
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000214550	lincRNA		9	-1	103960193	1119
ENSMUSG00000021598	protein_coding	Med10	ENSMUST00000221893	protein_coding		13	1	69809914	815
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000215044	lincRNA		9	-1	103960129	1165
ENSMUSG00000008892	protein_coding	Vdac3	ENSMUST00000009036	protein_coding	principal2	8	-1	22593758	1354
ENSMUSG00000099722	lincRNA	Gm29154	ENSMUST00000213265	lincRNA		9	-1	103960141	1023
ENSMUSG00000038010	protein_coding	Ccdc138	ENSMUST00000217992	processed_transcript		10	1	58498205	2750
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000113827	protein_coding		16	-1	96082526	2382
ENSMUSG00000111035	lincRNA	Gm33054	ENSMUST00000216588	lincRNA		9	-1	104002339	313
ENSMUSG00000075592	protein_coding	Nynrin	ENSMUST00000227465	protein_coding		14	1	55854010	470
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000023043	protein_coding	principal1	15	1	80948490	3711
ENSMUSG00000112670	processed_pseudogene	Gm18042	ENSMUST00000219887	processed_pseudogene		10	1	58555267	790
ENSMUSG00000021598	protein_coding	Med10	ENSMUST00000220649	retained_intron		13	1	69811585	451
ENSMUSG00000087260	protein_coding	Lamtor5	ENSMUST00000199317	protein_coding	alternative2	3	1	107278999	743
ENSMUSG00000008892	protein_coding	Vdac3	ENSMUST00000210096	retained_intron		8	-1	22593711	517
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000164806	protein_coding		15	1	80948491	1595
ENSMUSG00000008892	protein_coding	Vdac3	ENSMUST00000211222	retained_intron		8	-1	22586121	4174
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000198302	retained_intron		15	1	80948504	1603
ENSMUSG00000020718	protein_coding	Polg2	ENSMUST00000127061	nonsense_mediated_decay		11	-1	106779537	1770
ENSMUSG00000049184	protein_coding	Purg	ENSMUST00000070340	protein_coding	principal1	8	1	33386325	1064
ENSMUSG00000087260	protein_coding	Lamtor5	ENSMUST00000145735	protein_coding	principal2	3	1	107278858	881
ENSMUSG00000048779	protein_coding	P2ry6	ENSMUST00000060174	protein_coding	principal1	7	-1	100964391	1946
ENSMUSG00000022914	protein_coding	Brwd1	ENSMUST00000099502	protein_coding	principal2	16	-1	96082428	8547
ENSMUSG00000020718	protein_coding	Polg2	ENSMUST00000155107	nonsense_mediated_decay		11	-1	106779473	1983
ENSMUSG00000020718	protein_coding	Polg2	ENSMUST00000134029	nonsense_mediated_decay		11	-1	106779473	2728
ENSMUSG00000008892	protein_coding	Vdac3	ENSMUST00000179233	protein_coding	alternative1	8	-1	22593813	1423
ENSMUSG00000048779	protein_coding	P2ry6	ENSMUST00000209196	processed_transcript		7	-1	100974649	676
ENSMUSG00000049184	protein_coding	Purg	ENSMUST00000078058	protein_coding		8	1	33386325	1795
ENSMUSG00000085884	processed_transcript	Gm15342	ENSMUST00000146222	processed_transcript		16	1	96036090	2100
ENSMUSG00000020718	protein_coding	Polg2	ENSMUST00000142590	retained_intron		11	-1	106773850	446
ENSMUSG00000080847	processed_pseudogene	Gm4773	ENSMUST00000120392	processed_pseudogene		X	-1	80061712	702
ENSMUSG00000048779	protein_coding	P2ry6	ENSMUST00000208653	retained_intron		7	-1	100964366	631
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000121096	protein_coding	alternative2	5	1	92331841	1600
ENSMUSG00000109132	TEC	Gm44545	ENSMUST00000208262	TEC		7	1	100950817	746
ENSMUSG00000029152	protein_coding	Ociad1	ENSMUST00000071081	protein_coding	alternative1	5	1	73292784	1311
ENSMUSG00000095593	protein_coding	Gm7138	ENSMUST00000167669	protein_coding	principal1	10	-1	77776944	693
ENSMUSG00000118374	processed_pseudogene	Gm17885	ENSMUST00000236809	processed_pseudogene		19	-1	30491285	583
ENSMUSG00000020718	protein_coding	Polg2	ENSMUST00000126201	nonsense_mediated_decay		11	-1	106779502	829
ENSMUSG00000081221	processed_pseudogene	Gm14760	ENSMUST00000121831	processed_pseudogene		X	-1	80194852	999
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000120781	protein_coding		5	1	92376975	732
ENSMUSG00000111915	protein_coding	Gm3285	ENSMUST00000218443	protein_coding	principal1	10	1	77861975	908
ENSMUSG00000112236	unprocessed_pseudogene	Gm48180	ENSMUST00000219191	unprocessed_pseudogene		10	-1	77735155	315
ENSMUSG00000112037	processed_pseudogene	Gm48179	ENSMUST00000218482	processed_pseudogene		10	-1	77718418	523
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000128246	protein_coding		5	1	92386887	732
ENSMUSG00000095970	protein_coding	Gm19402	ENSMUST00000180297	protein_coding	principal1	10	-1	77690757	801
ENSMUSG00000037772	protein_coding	Mrpl23	ENSMUST00000137345	processed_transcript		7	1	142532686	644
ENSMUSG00000087193	antisense	Gm14820	ENSMUST00000145941	antisense		X	1	8042943	683
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000145072	protein_coding		5	1	92387763	388
ENSMUSG00000087193	antisense	Gm14820	ENSMUST00000149438	antisense		X	1	8049172	617
ENSMUSG00000075592	protein_coding	Nynrin	ENSMUST00000168479	protein_coding	principal1	14	1	55854017	7511
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000138687	protein_coding		5	1	92387846	232
ENSMUSG00000069582	protein_coding	Krtap10-4	ENSMUST00000092369	protein_coding	principal1	10	-1	77827095	981
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000166711	nonsense_mediated_decay		15	1	80948512	1932
ENSMUSG00000069584	protein_coding	Gm10272	ENSMUST00000092371	protein_coding	principal1	10	1	77706626	350
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000124509	protein_coding		5	1	92387851	869
ENSMUSG00000010517	protein_coding	Faf1	ENSMUST00000102724	protein_coding	principal1	4	1	109676588	4468
ENSMUSG00000050700	protein_coding	Emilin3	ENSMUST00000109454	protein_coding	alternative2	2	-1	160912317	3396
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000207170	protein_coding		15	1	80948517	713
ENSMUSG00000075592	protein_coding	Nynrin	ENSMUST00000100529	protein_coding	principal1	14	1	55854036	6990
ENSMUSG00000010517	protein_coding	Faf1	ENSMUST00000143217	processed_transcript		4	1	109676997	177
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000200201	nonsense_mediated_decay		15	1	80948519	856
ENSMUSG00000094913	protein_coding	Gm9507	ENSMUST00000095491	protein_coding	principal1	10	-1	77811843	877
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000168756	protein_coding		15	1	80948519	1439
ENSMUSG00000094913	protein_coding	Gm9507	ENSMUST00000180157	protein_coding		10	-1	77811843	654
ENSMUSG00000050700	protein_coding	Emilin3	ENSMUST00000057169	protein_coding	principal3	2	-1	160912328	3547
ENSMUSG00000038729	protein_coding	Pakap	ENSMUST00000043456	protein_coding	principal1	4	1	57854159	7211
ENSMUSG00000106094	processed_pseudogene	Gm18916	ENSMUST00000198264	processed_pseudogene		3	1	126278030	1246
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000169238	nonsense_mediated_decay		15	1	80948537	926
ENSMUSG00000117014	processed_pseudogene	Gm9300	ENSMUST00000233403	processed_pseudogene		17	-1	63702490	655
ENSMUSG00000038729	protein_coding	Pakap	ENSMUST00000098064	protein_coding		4	1	57854159	7172
ENSMUSG00000082346	processed_pseudogene	Gm6952	ENSMUST00000118629	processed_pseudogene		X	-1	80197239	159
ENSMUSG00000010517	protein_coding	Faf1	ENSMUST00000155204	processed_transcript		4	1	109840785	1132
ENSMUSG00000038729	protein_coding	Pakap	ENSMUST00000102902	protein_coding		4	1	57854159	6993
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000164371	retained_intron		15	1	80948542	632
ENSMUSG00000036856	protein_coding	Wnt4	ENSMUST00000045747	protein_coding	principal1	4	1	137277489	4194
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000170354	protein_coding		15	1	80948777	252
ENSMUSG00000117093	TEC	Gm49949	ENSMUST00000232893	TEC		17	1	68844025	2503
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000163575	retained_intron		15	1	80961213	466
ENSMUSG00000038729	protein_coding	Pakap	ENSMUST00000107598	protein_coding		4	1	57845248	6830
ENSMUSG00000069581	protein_coding	Tspear	ENSMUST00000092366	protein_coding	principal1	10	1	77686569	2446
ENSMUSG00000083444	processed_pseudogene	Gm14768	ENSMUST00000122126	processed_pseudogene		X	1	80362549	678
ENSMUSG00000022407	protein_coding	Adsl	ENSMUST00000199284	nonsense_mediated_decay		15	1	80963923	466
ENSMUSG00000087193	antisense	Gm14820	ENSMUST00000126286	antisense		X	1	8049248	1449
ENSMUSG00000102979	lincRNA	Gm37350	ENSMUST00000192782	lincRNA		3	-1	5885503	313
ENSMUSG00000073846	processed_transcript	Gm12526	ENSMUST00000154462	processed_transcript		4	-1	57763901	615
ENSMUSG00000087193	antisense	Gm14820	ENSMUST00000153013	antisense		X	1	8049328	801
ENSMUSG00000087193	antisense	Gm14820	ENSMUST00000188632	antisense		X	1	8051591	1177
ENSMUSG00000027072	protein_coding	Prg3	ENSMUST00000028466	protein_coding	principal1	2	1	84988215	949
ENSMUSG00000087147	lincRNA	Gm14228	ENSMUST00000131908	lincRNA		2	-1	160926648	798
ENSMUSG00000040380	protein_coding	Cbln3	ENSMUST00000063871	protein_coding	principal1	14	-1	55884392	4866
ENSMUSG00000103662	TEC	Gm34294	ENSMUST00000191912	TEC		2	-1	169628318	4263
ENSMUSG00000081205	processed_pseudogene	Gm5940	ENSMUST00000117582	processed_pseudogene		X	1	80456742	1068
ENSMUSG00000027072	protein_coding	Prg3	ENSMUST00000135939	processed_transcript		2	1	84988215	481
ENSMUSG00000027470	protein_coding	Mylk2	ENSMUST00000028970	protein_coding	principal1	2	1	152911352	2951
ENSMUSG00000050266	protein_coding	Olfr690	ENSMUST00000211006	protein_coding	principal1	7	-1	105334104	2048
ENSMUSG00000033938	protein_coding	Ndufb7	ENSMUST00000036996	protein_coding	principal1	8	1	83566671	623
ENSMUSG00000083063	processed_pseudogene	Gm14882	ENSMUST00000117216	processed_pseudogene		X	1	106755333	218
ENSMUSG00000050266	protein_coding	Olfr690	ENSMUST00000216230	protein_coding	principal1	7	-1	105334104	2085
ENSMUSG00000083367	processed_pseudogene	Gm8806	ENSMUST00000120076	processed_pseudogene		X	-1	80535151	1407
ENSMUSG00000033938	protein_coding	Ndufb7	ENSMUST00000127162	retained_intron		8	1	83566758	4435
ENSMUSG00000084300	processed_pseudogene	Gm6954	ENSMUST00000117416	processed_pseudogene		X	1	80666313	225
ENSMUSG00000050266	protein_coding	Olfr690	ENSMUST00000061920	protein_coding	principal1	7	-1	105330278	1062
ENSMUSG00000040380	protein_coding	Cbln3	ENSMUST00000172378	protein_coding	principal1	14	-1	55884232	1438
ENSMUSG00000094828	TR_V_gene	Trav3-3	ENSMUST00000181768	TR_V_gene		14	1	53665929	419
ENSMUSG00000094828	TR_V_gene	Trav3-3	ENSMUST00000183835	TR_V_gene	principal1	14	1	53666227	276
ENSMUSG00000029598	protein_coding	Plbd2	ENSMUST00000031597	protein_coding	principal1	5	-1	120503625	4208
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000120193	protein_coding	alternative2	5	1	92388143	1371
ENSMUSG00000103848	processed_pseudogene	Gm17934	ENSMUST00000192818	processed_pseudogene		3	-1	6138244	422
ENSMUSG00000081740	processed_pseudogene	Gm14279	ENSMUST00000117142	processed_pseudogene		2	-1	157522028	332
ENSMUSG00000037772	protein_coding	Mrpl23	ENSMUST00000038675	protein_coding	principal2	7	1	142533012	692
ENSMUSG00000103733	processed_pseudogene	Gm6162	ENSMUST00000194870	processed_pseudogene		3	-1	6167824	2930
ENSMUSG00000082329	processed_pseudogene	Gm14287	ENSMUST00000121060	processed_pseudogene		2	-1	157528985	117
ENSMUSG00000104270	processed_pseudogene	Gm38298	ENSMUST00000193578	processed_pseudogene		3	-1	6267900	118
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000117108	protein_coding	alternative2	5	1	92388143	1408
ENSMUSG00000047907	protein_coding	Tshz2	ENSMUST00000109159	protein_coding	principal1	2	1	169633013	4314
ENSMUSG00000037772	protein_coding	Mrpl23	ENSMUST00000210803	protein_coding		7	1	142533161	590
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000118106	protein_coding	alternative2	5	1	92388143	1401
ENSMUSG00000021967	protein_coding	Mrpl57	ENSMUST00000022538	protein_coding	principal1	14	1	57826234	2877
ENSMUSG00000087445	antisense	Gm14286	ENSMUST00000155674	antisense		2	-1	157545469	464
ENSMUSG00000037772	protein_coding	Mrpl23	ENSMUST00000209576	retained_intron		7	1	142533162	3715
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000120416	protein_coding	alternative2	5	1	92388143	1478
ENSMUSG00000037772	protein_coding	Mrpl23	ENSMUST00000210662	protein_coding	alternative2	7	1	142533782	736
ENSMUSG00000073460	protein_coding	Pnldc1	ENSMUST00000233474	nonsense_mediated_decay		17	-1	12909946	2004
ENSMUSG00000047907	protein_coding	Tshz2	ENSMUST00000109157	protein_coding	principal1	2	1	169633676	5083
ENSMUSG00000050954	protein_coding	Zfp169	ENSMUST00000176176	protein_coding		13	-1	48513436	2162
ENSMUSG00000043948	protein_coding	Olfr691	ENSMUST00000213290	protein_coding	principal1	7	-1	105342270	2327
ENSMUSG00000021967	protein_coding	Mrpl57	ENSMUST00000224313	retained_intron		14	1	57826430	519
ENSMUSG00000037772	protein_coding	Mrpl23	ENSMUST00000145002	retained_intron		7	1	142534522	712
ENSMUSG00000029598	protein_coding	Plbd2	ENSMUST00000131831	retained_intron		5	-1	120503601	4631
ENSMUSG00000037772	protein_coding	Mrpl23	ENSMUST00000141098	retained_intron		7	1	142536104	693
ENSMUSG00000043948	protein_coding	Olfr691	ENSMUST00000057528	protein_coding	principal1	7	-1	105337714	969
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000129222	processed_transcript		5	1	92388143	662
ENSMUSG00000096678	TR_V_gene	Trav9-4	ENSMUST00000103662	TR_V_gene	principal1	14	1	53676141	395
ENSMUSG00000083944	processed_pseudogene	Gm14733	ENSMUST00000117680	processed_pseudogene		X	-1	80932948	133
ENSMUSG00000047907	protein_coding	Tshz2	ENSMUST00000185239	protein_coding		2	1	169884893	3116
ENSMUSG00000050954	protein_coding	Zfp169	ENSMUST00000177530	protein_coding	principal1	13	-1	48513394	4145
ENSMUSG00000103878	transcribed_processed_pseudogene	Gm8197	ENSMUST00000193422	transcribed_processed_pseudogene		1	1	182546250	934
ENSMUSG00000047907	protein_coding	Tshz2	ENSMUST00000123300	protein_coding		2	1	169884893	3243
ENSMUSG00000103878	transcribed_processed_pseudogene	Gm8197	ENSMUST00000192906	processed_transcript		1	1	182546672	363
ENSMUSG00000061457	protein_coding	Olfr871	ENSMUST00000073122	protein_coding	principal1	9	1	20212207	1147
ENSMUSG00000029598	protein_coding	Plbd2	ENSMUST00000151361	retained_intron		5	-1	120503612	1453
ENSMUSG00000085808	antisense	Gm14718	ENSMUST00000138082	antisense		X	1	57200643	752
ENSMUSG00000085238	lincRNA	4930479D17Rik	ENSMUST00000146754	lincRNA		6	1	146657218	740
ENSMUSG00000069581	protein_coding	Tspear	ENSMUST00000125241	retained_intron		10	1	77864582	722
ENSMUSG00000047907	protein_coding	Tshz2	ENSMUST00000140699	protein_coding		2	1	169885835	1111
ENSMUSG00000042414	protein_coding	Prdm14	ENSMUST00000047577	protein_coding	principal1	1	-1	13127163	2564
ENSMUSG00000030219	protein_coding	Erp27	ENSMUST00000032343	protein_coding	principal1	6	-1	136922180	1029
ENSMUSG00000103852	processed_pseudogene	Gm18658	ENSMUST00000195558	processed_pseudogene		3	-1	6378601	270
ENSMUSG00000050954	protein_coding	Zfp169	ENSMUST00000176996	protein_coding		13	-1	48513410	562
ENSMUSG00000086165	antisense	Gm15690	ENSMUST00000128728	antisense		5	-1	120480903	432
ENSMUSG00000090053	protein_coding	Pakap	ENSMUST00000102905	protein_coding	principal1	4	1	57434247	3271
ENSMUSG00000098226	processed_pseudogene	Gm5272	ENSMUST00000182730	processed_pseudogene		3	-1	6451588	982
ENSMUSG00000072082	protein_coding	Ccnf	ENSMUST00000115390	protein_coding	principal1	17	-1	24251409	4133
ENSMUSG00000103935	TEC	AY702102	ENSMUST00000194651	TEC		2	-1	169963187	1173
ENSMUSG00000050954	protein_coding	Zfp169	ENSMUST00000176949	protein_coding		13	-1	48513426	417
ENSMUSG00000103935	TEC	AY702102	ENSMUST00000194482	TEC		2	-1	169962987	860
ENSMUSG00000046561	protein_coding	Arsj	ENSMUST00000093976	protein_coding	principal1	3	1	126363684	3859
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000119587	protein_coding	alternative2	5	1	92388143	1310
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000176271	protein_coding	principal1	15	-1	100586365	4575
ENSMUSG00000069581	protein_coding	Tspear	ENSMUST00000092368	retained_intron		10	1	77864623	2169
ENSMUSG00000082939	processed_pseudogene	Gm14881	ENSMUST00000120366	processed_pseudogene		X	1	106755736	372
ENSMUSG00000096096	TR_V_gene	Trav4-4-dv10	ENSMUST00000103663	TR_V_gene	principal1	14	1	53683647	361
ENSMUSG00000022443	protein_coding	Myh9	ENSMUST00000016771	protein_coding	principal1	15	-1	77842175	7433
ENSMUSG00000073906	protein_coding	Olfr692	ENSMUST00000098152	protein_coding	principal1	7	1	105368230	1126
ENSMUSG00000090427	antisense	Gm17225	ENSMUST00000172051	antisense		3	-1	126439269	497
ENSMUSG00000073906	protein_coding	Olfr692	ENSMUST00000217827	protein_coding		7	1	105368230	1126
ENSMUSG00000072082	protein_coding	Ccnf	ENSMUST00000234837	retained_intron		17	-1	24230723	756
ENSMUSG00000063239	protein_coding	Grm4	ENSMUST00000118489	protein_coding		17	-1	27503304	2976
ENSMUSG00000080841	processed_pseudogene	Gm14880	ENSMUST00000117581	processed_pseudogene		X	1	106821940	292
ENSMUSG00000112170	protein_coding	Gm9508	ENSMUST00000220084	protein_coding	principal1	10	-1	77697233	693
ENSMUSG00000030219	protein_coding	Erp27	ENSMUST00000162243	retained_intron		6	-1	136922180	2174
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000126281	protein_coding		5	1	92392585	1187
ENSMUSG00000090053	protein_coding	Pakap	ENSMUST00000102904	protein_coding	principal1	4	1	57568159	2958
ENSMUSG00000105695	TEC	Gm43327	ENSMUST00000199285	TEC		3	1	126441012	4055
ENSMUSG00000030219	protein_coding	Erp27	ENSMUST00000162755	retained_intron		6	-1	136922140	557
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000138003	protein_coding		5	1	92393059	684
ENSMUSG00000029152	protein_coding	Ociad1	ENSMUST00000031038	protein_coding	principal3	5	1	73292792	1523
ENSMUSG00000103150	processed_pseudogene	Gm38291	ENSMUST00000193671	processed_pseudogene		3	-1	6611463	259
ENSMUSG00000094120	protein_coding	Gm3233	ENSMUST00000168997	protein_coding	principal1	10	-1	77759682	693
ENSMUSG00000028692	protein_coding	Akr1a1	ENSMUST00000030455	protein_coding	principal1	4	-1	116651680	1420
ENSMUSG00000022443	protein_coding	Myh9	ENSMUST00000229259	protein_coding		15	-1	77769779	329
ENSMUSG00000050954	protein_coding	Zfp169	ENSMUST00000177474	retained_intron		13	-1	48513451	4175
ENSMUSG00000105233	processed_pseudogene	Gm20568	ENSMUST00000197129	processed_pseudogene		3	1	126447743	208
ENSMUSG00000073460	protein_coding	Pnldc1	ENSMUST00000163394	protein_coding	principal1	17	-1	12910230	2092
ENSMUSG00000050954	protein_coding	Zfp169	ENSMUST00000167682	protein_coding		13	-1	48506939	411
ENSMUSG00000090053	protein_coding	Pakap	ENSMUST00000142556	nonsense_mediated_decay		4	1	57568320	1323
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000152041	protein_coding		5	1	92401998	494
ENSMUSG00000022443	protein_coding	Myh9	ENSMUST00000139729	retained_intron		15	-1	77767190	723
ENSMUSG00000028692	protein_coding	Akr1a1	ENSMUST00000126146	processed_transcript		4	-1	116638014	412
ENSMUSG00000050954	protein_coding	Zfp169	ENSMUST00000110110	protein_coding	principal1	13	-1	48506939	2196
ENSMUSG00000112864	protein_coding	Gm18596	ENSMUST00000218133	protein_coding	principal1	10	-1	77742638	843
ENSMUSG00000034842	protein_coding	Art3	ENSMUST00000113083	protein_coding	principal3	5	1	92331841	1561
ENSMUSG00000022443	protein_coding	Myh9	ENSMUST00000231192	protein_coding		15	-1	77781133	633
ENSMUSG00000090053	protein_coding	Pakap	ENSMUST00000131201	retained_intron		4	1	57637975	423
ENSMUSG00000112653	protein_coding	Gm36176	ENSMUST00000218749	protein_coding	principal1	10	1	77846803	501
ENSMUSG00000073460	protein_coding	Pnldc1	ENSMUST00000233098	nonsense_mediated_decay		17	-1	12890174	432
ENSMUSG00000112600	protein_coding	Gm49918	ENSMUST00000220062	protein_coding	principal5	10	1	77814682	723
ENSMUSG00000028692	protein_coding	Akr1a1	ENSMUST00000128010	processed_transcript		4	-1	116651396	2227
ENSMUSG00000028692	protein_coding	Akr1a1	ENSMUST00000128059	protein_coding		4	-1	116649474	728
ENSMUSG00000047228	protein_coding	A2ml1	ENSMUST00000060574	protein_coding	principal1	6	-1	128581608	4695
ENSMUSG00000032010	protein_coding	Usp2	ENSMUST00000034508	protein_coding		9	1	44067021	3867
ENSMUSG00000073460	protein_coding	Pnldc1	ENSMUST00000233548	nonsense_mediated_decay		17	-1	12910000	1666
ENSMUSG00000112600	protein_coding	Gm49918	ENSMUST00000220393	protein_coding	alternative2	10	1	77814682	684
ENSMUSG00000039146	protein_coding	Ifi44l	ENSMUST00000046739	protein_coding	principal1	3	-1	151762892	1376
ENSMUSG00000112223	protein_coding	Krtap10-10	ENSMUST00000218843	protein_coding	principal1	10	1	77835947	1306
ENSMUSG00000073460	protein_coding	Pnldc1	ENSMUST00000233189	nonsense_mediated_decay		17	-1	12895584	522
ENSMUSG00000070524	protein_coding	Fcrlb	ENSMUST00000094337	protein_coding	principal1	1	-1	170912941	1284
ENSMUSG00000029152	protein_coding	Ociad1	ENSMUST00000166823	protein_coding	alternative1	5	1	73292793	3354
ENSMUSG00000095721	protein_coding	Gm7137	ENSMUST00000180161	protein_coding	principal1	10	-1	77788200	711
ENSMUSG00000073460	protein_coding	Pnldc1	ENSMUST00000233711	retained_intron		17	-1	12893023	414
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000022040	protein_coding	principal3	13	-1	59557311	8174
ENSMUSG00000032010	protein_coding	Usp2	ENSMUST00000177054	protein_coding		9	1	44067078	2370
ENSMUSG00000047228	protein_coding	A2ml1	ENSMUST00000205167	retained_intron		6	-1	128553278	670
ENSMUSG00000089945	protein_coding	Pakap	ENSMUST00000098066	nonsense_mediated_decay	alternative2	4	1	57568179	7576
ENSMUSG00000089945	protein_coding	Pakap	ENSMUST00000126465	nonsense_mediated_decay	alternative2	4	1	57568330	1333
ENSMUSG00000047228	protein_coding	A2ml1	ENSMUST00000203889	retained_intron		6	-1	128559547	748
ENSMUSG00000096380	protein_coding	Gm19668	ENSMUST00000178581	protein_coding	principal1	10	-1	77799133	747
ENSMUSG00000047228	protein_coding	A2ml1	ENSMUST00000203129	retained_intron		6	-1	128576746	2563
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000166276	processed_transcript		13	-1	59450228	278
ENSMUSG00000069118	protein_coding	1700008P02Rik	ENSMUST00000091364	protein_coding	principal1	3	-1	6620443	783
ENSMUSG00000089945	protein_coding	Pakap	ENSMUST00000150412	protein_coding	principal5	4	1	57637823	5163
ENSMUSG00000063239	protein_coding	Grm4	ENSMUST00000118161	protein_coding	principal1	17	-1	27513406	4607
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000128152	nonsense_mediated_decay		2	-1	91965587	3512
ENSMUSG00000081615	processed_pseudogene	Gm12539	ENSMUST00000121549	processed_pseudogene		4	-1	57457549	1098
ENSMUSG00000103538	unprocessed_pseudogene	Olfr289-ps1	ENSMUST00000192834	unprocessed_pseudogene		3	-1	6752072	369
ENSMUSG00000094012	protein_coding	Gm10024	ENSMUST00000075421	protein_coding	principal1	10	1	77711457	553
ENSMUSG00000032860	protein_coding	P2ry2	ENSMUST00000037540	protein_coding	principal1	7	-1	101011998	3011
ENSMUSG00000017754	protein_coding	Pltp	ENSMUST00000109316	protein_coding	principal1	2	-1	164857542	2226
ENSMUSG00000063239	protein_coding	Grm4	ENSMUST00000231416	protein_coding		17	-1	27521403	3451
ENSMUSG00000073460	protein_coding	Pnldc1	ENSMUST00000232982	protein_coding		17	-1	12909893	620
ENSMUSG00000063239	protein_coding	Grm4	ENSMUST00000231809	protein_coding		17	-1	27503324	3298
ENSMUSG00000117072	antisense	Gm49926	ENSMUST00000233153	antisense		17	1	12897537	368
ENSMUSG00000096481	protein_coding	Gm3250	ENSMUST00000167358	protein_coding	principal1	10	-1	77782542	693
ENSMUSG00000080902	transcribed_processed_pseudogene	Ywhaq-ps3	ENSMUST00000120944	transcribed_processed_pseudogene		4	-1	70249373	738
ENSMUSG00000063239	protein_coding	Grm4	ENSMUST00000231290	protein_coding	principal1	17	-1	27513714	3417
ENSMUSG00000029152	protein_coding	Ociad1	ENSMUST00000202250	protein_coding	alternative1	5	1	73292807	800
ENSMUSG00000069583	protein_coding	Krtap12-1	ENSMUST00000092370	protein_coding	principal1	10	1	77720599	656
ENSMUSG00000032860	protein_coding	P2ry2	ENSMUST00000208340	protein_coding	principal1	7	-1	101003887	2693
ENSMUSG00000039298	protein_coding	Cdk5rap2	ENSMUST00000124251	processed_transcript		4	-1	70243852	582
ENSMUSG00000034981	protein_coding	Parm1	ENSMUST00000040576	protein_coding	principal1	5	1	91517615	5068
ENSMUSG00000072664	protein_coding	Ugt3a1	ENSMUST00000175695	processed_transcript		15	1	9276888	741
ENSMUSG00000029152	protein_coding	Ociad1	ENSMUST00000201556	protein_coding		5	1	73292832	999
ENSMUSG00000096131	protein_coding	Gm9639	ENSMUST00000172205	protein_coding	principal1	10	-1	77795076	678
ENSMUSG00000063239	protein_coding	Grm4	ENSMUST00000232243	nonsense_mediated_decay		17	-1	27513726	2984
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000176140	nonsense_mediated_decay		15	-1	100591934	4405
ENSMUSG00000032860	protein_coding	P2ry2	ENSMUST00000207916	protein_coding	principal1	7	-1	101012037	2372
ENSMUSG00000022443	protein_coding	Myh9	ENSMUST00000126796	retained_intron		15	-1	77842056	2904
ENSMUSG00000029152	protein_coding	Ociad1	ENSMUST00000202237	protein_coding		5	1	73292841	774
ENSMUSG00000071195	protein_coding	Gm10318	ENSMUST00000186874	protein_coding	principal1	10	1	77852859	930
ENSMUSG00000031132	protein_coding	Cd40lg	ENSMUST00000033466	protein_coding	principal1	X	1	57212143	1250
ENSMUSG00000072082	protein_coding	Ccnf	ENSMUST00000234381	retained_intron		17	-1	24251347	1721
ENSMUSG00000071195	protein_coding	Gm10318	ENSMUST00000217996	protein_coding		10	1	77852862	639
ENSMUSG00000063239	protein_coding	Grm4	ENSMUST00000146277	retained_intron		17	-1	27473316	810
ENSMUSG00000032860	protein_coding	P2ry2	ENSMUST00000178340	protein_coding	principal1	7	-1	101011974	2137
ENSMUSG00000029152	protein_coding	Ociad1	ENSMUST00000200935	protein_coding	alternative1	5	1	73292895	1139
ENSMUSG00000072082	protein_coding	Ccnf	ENSMUST00000234949	retained_intron		17	-1	24232511	756
ENSMUSG00000063239	protein_coding	Grm4	ENSMUST00000147865	processed_transcript		17	-1	27473067	645
ENSMUSG00000104673	processed_pseudogene	Gm43550	ENSMUST00000200597	processed_pseudogene		14	-1	53694875	303
ENSMUSG00000096421	protein_coding	Gm10100	ENSMUST00000179726	protein_coding	principal1	10	1	77726486	363
ENSMUSG00000072082	protein_coding	Ccnf	ENSMUST00000234541	nonsense_mediated_decay		17	-1	24240883	675
ENSMUSG00000029152	protein_coding	Ociad1	ENSMUST00000201505	protein_coding		5	1	73293053	592
ENSMUSG00000072082	protein_coding	Ccnf	ENSMUST00000234916	retained_intron		17	-1	24251318	1045
ENSMUSG00000022443	protein_coding	Myh9	ENSMUST00000129453	retained_intron		15	-1	77842105	2228
ENSMUSG00000072082	protein_coding	Ccnf	ENSMUST00000234491	retained_intron		17	-1	24251347	2222
ENSMUSG00000032860	protein_coding	P2ry2	ENSMUST00000207049	protein_coding		7	-1	101012866	528
ENSMUSG00000068182	protein_coding	Olfr203	ENSMUST00000215893	protein_coding	principal1	16	1	59298881	1521
ENSMUSG00000017754	protein_coding	Pltp	ENSMUST00000109317	protein_coding		2	-1	164857633	1575
ENSMUSG00000012350	protein_coding	Ehf	ENSMUST00000090475	protein_coding	principal1	2	-1	103303278	4469
ENSMUSG00000022443	protein_coding	Myh9	ENSMUST00000123101	nonsense_mediated_decay		15	-1	77842047	1191
ENSMUSG00000032860	protein_coding	P2ry2	ENSMUST00000208258	retained_intron		7	-1	101011991	565
ENSMUSG00000072082	protein_coding	Ccnf	ENSMUST00000234708	processed_transcript		17	-1	24249572	825
ENSMUSG00000022443	protein_coding	Myh9	ENSMUST00000124844	processed_transcript		15	-1	77813231	720
ENSMUSG00000094146	protein_coding	Gm10142	ENSMUST00000179767	protein_coding	principal1	10	1	77715807	363
ENSMUSG00000029152	protein_coding	Ociad1	ENSMUST00000201739	nonsense_mediated_decay		5	1	73295003	798
ENSMUSG00000049658	protein_coding	Bdp1	ENSMUST00000038104	protein_coding	principal2	13	-1	100104070	9921
ENSMUSG00000068182	protein_coding	Olfr203	ENSMUST00000089305	protein_coding		16	1	59303152	924
ENSMUSG00000072082	protein_coding	Ccnf	ENSMUST00000235059	processed_transcript		17	-1	24251347	317
ENSMUSG00000029152	protein_coding	Ociad1	ENSMUST00000201191	retained_intron		5	1	73304127	1033
ENSMUSG00000022443	protein_coding	Myh9	ENSMUST00000134878	retained_intron		15	-1	77842105	2980
ENSMUSG00000012350	protein_coding	Ehf	ENSMUST00000111176	protein_coding		2	-1	103303166	3696
ENSMUSG00000067787	protein_coding	Blcap	ENSMUST00000109528	protein_coding	principal1	2	-1	157566337	2056
ENSMUSG00000111961	lincRNA	Gm47966	ENSMUST00000217923	lincRNA		10	-1	126719394	675
ENSMUSG00000107292	TEC	Gm42733	ENSMUST00000201272	TEC		5	-1	73308577	519
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000169745	nonsense_mediated_decay		13	-1	59556922	4143
ENSMUSG00000105250	processed_pseudogene	Gm29736	ENSMUST00000198189	processed_pseudogene		3	1	116844579	385
ENSMUSG00000012350	protein_coding	Ehf	ENSMUST00000111174	protein_coding	principal1	2	-1	103283760	1307
ENSMUSG00000072082	protein_coding	Ccnf	ENSMUST00000234096	retained_intron		17	-1	24251484	777
ENSMUSG00000017754	protein_coding	Pltp	ENSMUST00000059954	protein_coding	principal1	2	-1	164857711	1809
ENSMUSG00000095817	protein_coding	Gm3238	ENSMUST00000168298	protein_coding	principal1	10	-1	77771325	693
ENSMUSG00000105241	processed_pseudogene	Gm43542	ENSMUST00000199505	processed_pseudogene		3	1	116846946	379
ENSMUSG00000086289	lincRNA	Gm16933	ENSMUST00000141741	lincRNA		8	1	25037052	2169
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000170555	nonsense_mediated_decay		13	-1	59557286	4601
ENSMUSG00000067787	protein_coding	Blcap	ENSMUST00000088494	protein_coding	principal1	2	-1	157566361	2108
ENSMUSG00000072664	protein_coding	Ugt3a1	ENSMUST00000022861	protein_coding	principal1	15	1	9279829	2244
ENSMUSG00000086289	lincRNA	Gm16933	ENSMUST00000211059	lincRNA		8	1	25037928	181
ENSMUSG00000095928	protein_coding	Olfr204	ENSMUST00000216261	protein_coding	principal1	16	-1	59318248	5371
ENSMUSG00000012350	protein_coding	Ehf	ENSMUST00000137774	retained_intron		2	-1	103274251	690
ENSMUSG00000109684	TEC	Gm45745	ENSMUST00000211447	TEC		8	-1	25104668	1180
ENSMUSG00000051669	protein_coding	AU021092	ENSMUST00000050160	protein_coding	principal1	16	-1	5222299	1368
ENSMUSG00000067787	protein_coding	Blcap	ENSMUST00000173378	protein_coding		2	-1	157571274	463
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000225133	retained_intron		13	-1	59465288	3874
ENSMUSG00000095928	protein_coding	Olfr204	ENSMUST00000072517	protein_coding	principal1	16	-1	59315405	918
ENSMUSG00000112380	protein_coding	Gm9736	ENSMUST00000219969	protein_coding	principal1	10	-1	77751354	834
ENSMUSG00000063698	protein_coding	Sfxn4	ENSMUST00000080806	nonsense_mediated_decay		19	-1	60861427	2923
ENSMUSG00000032010	protein_coding	Usp2	ENSMUST00000114830	protein_coding		9	1	44069443	2122
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000163149	protein_coding		13	-1	59533190	2293
ENSMUSG00000111976	unprocessed_pseudogene	Gm48178	ENSMUST00000218203	unprocessed_pseudogene		10	-1	77749580	87
ENSMUSG00000072664	protein_coding	Ugt3a1	ENSMUST00000176173	processed_transcript		15	1	9279848	428
ENSMUSG00000017754	protein_coding	Pltp	ENSMUST00000142603	retained_intron		2	-1	164856796	653
ENSMUSG00000012350	protein_coding	Ehf	ENSMUST00000125788	protein_coding		2	-1	103299565	748
ENSMUSG00000067787	protein_coding	Blcap	ENSMUST00000134239	processed_transcript		2	-1	157560007	433
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000224397	protein_coding		13	-1	59474581	844
ENSMUSG00000067787	protein_coding	Blcap	ENSMUST00000131902	processed_transcript		2	-1	157566331	316
ENSMUSG00000072664	protein_coding	Ugt3a1	ENSMUST00000145326	processed_transcript		15	1	9279850	403
ENSMUSG00000012350	protein_coding	Ehf	ENSMUST00000140503	protein_coding		2	-1	103290937	656
ENSMUSG00000112832	lincRNA	4930484H19Rik	ENSMUST00000218870	lincRNA		10	-1	126793710	1737
ENSMUSG00000067787	protein_coding	Blcap	ENSMUST00000174336	processed_transcript		2	-1	157571274	410
ENSMUSG00000017754	protein_coding	Pltp	ENSMUST00000148912	processed_transcript		2	-1	164857626	754
ENSMUSG00000032010	protein_coding	Usp2	ENSMUST00000176671	protein_coding		9	1	44072204	659
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000164215	protein_coding	alternative2	13	-1	59544439	4331
ENSMUSG00000012350	protein_coding	Ehf	ENSMUST00000151265	protein_coding		2	-1	103302920	530
ENSMUSG00000017754	protein_coding	Pltp	ENSMUST00000156255	protein_coding		2	-1	164857620	1130
ENSMUSG00000112492	processed_pseudogene	Gm9111	ENSMUST00000219394	processed_pseudogene		10	-1	126810300	709
ENSMUSG00000049658	protein_coding	Bdp1	ENSMUST00000099262	nonsense_mediated_decay		13	-1	100056213	5352
ENSMUSG00000072664	protein_coding	Ugt3a1	ENSMUST00000176878	protein_coding		15	1	9283501	352
ENSMUSG00000049658	protein_coding	Bdp1	ENSMUST00000109379	protein_coding	alternative2	13	-1	100103838	7567
ENSMUSG00000012350	protein_coding	Ehf	ENSMUST00000128546	retained_intron		2	-1	103303167	873
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000168141	nonsense_mediated_decay		13	-1	59481338	680
ENSMUSG00000017754	protein_coding	Pltp	ENSMUST00000128110	protein_coding		2	-1	164857630	538
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000165477	nonsense_mediated_decay		13	-1	59557295	6290
ENSMUSG00000049658	protein_coding	Bdp1	ENSMUST00000105697	retained_intron		13	-1	100046827	636
ENSMUSG00000039231	protein_coding	Suv39h1	ENSMUST00000115638	protein_coding	principal1	X	-1	8074760	3116
ENSMUSG00000035310	protein_coding	Lin54	ENSMUST00000123572	protein_coding	principal3	5	-1	100498578	4592
ENSMUSG00000018923	protein_coding	Med11	ENSMUST00000151013	protein_coding		11	1	70451919	445
ENSMUSG00000049658	protein_coding	Bdp1	ENSMUST00000167815	retained_intron		13	-1	100066451	809
ENSMUSG00000035310	protein_coding	Lin54	ENSMUST00000144716	retained_intron		5	-1	100498578	1803
ENSMUSG00000067786	protein_coding	Nnat	ENSMUST00000153739	protein_coding	alternative1	2	1	157560078	1146
ENSMUSG00000032959	protein_coding	Pebp1	ENSMUST00000036951	protein_coding	principal1	5	-1	117287625	1240
ENSMUSG00000032010	protein_coding	Usp2	ENSMUST00000065461	protein_coding	principal2	9	1	44084939	2057
ENSMUSG00000039231	protein_coding	Suv39h1	ENSMUST00000150095	retained_intron		X	-1	8074621	2807
ENSMUSG00000039873	protein_coding	Neurl2	ENSMUST00000042775	protein_coding	principal1	2	-1	164833456	1014
ENSMUSG00000035310	protein_coding	Lin54	ENSMUST00000137750	protein_coding	alternative1	5	-1	100498591	4056
ENSMUSG00000035310	protein_coding	Lin54	ENSMUST00000149714	protein_coding	alternative1	5	-1	100500592	3869
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000073837	protein_coding		15	-1	100599984	4953
ENSMUSG00000032010	protein_coding	Usp2	ENSMUST00000176416	protein_coding	alternative1	9	1	44084950	1486
ENSMUSG00000032959	protein_coding	Pebp1	ENSMUST00000111973	protein_coding		5	-1	117287583	779
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000109830	protein_coding		13	-1	59557286	2879
ENSMUSG00000032959	protein_coding	Pebp1	ENSMUST00000142428	nonsense_mediated_decay		5	-1	117287568	644
ENSMUSG00000018923	protein_coding	Med11	ENSMUST00000019067	protein_coding	principal1	11	1	70451919	902
ENSMUSG00000039231	protein_coding	Suv39h1	ENSMUST00000115637	protein_coding		X	-1	8074258	2778
ENSMUSG00000063698	protein_coding	Sfxn4	ENSMUST00000135808	protein_coding	principal1	19	-1	60861479	1309
ENSMUSG00000049658	protein_coding	Bdp1	ENSMUST00000167203	processed_transcript		13	-1	100098576	628
ENSMUSG00000032959	protein_coding	Pebp1	ENSMUST00000139913	retained_intron		5	-1	117287525	571
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000177335	retained_intron		15	-1	100580231	3654
ENSMUSG00000039231	protein_coding	Suv39h1	ENSMUST00000115636	protein_coding		X	-1	8074729	2707
ENSMUSG00000032010	protein_coding	Usp2	ENSMUST00000175816	nonsense_mediated_decay		9	1	44087190	748
ENSMUSG00000018923	protein_coding	Med11	ENSMUST00000152348	retained_intron		11	1	70451932	870
ENSMUSG00000067786	protein_coding	Nnat	ENSMUST00000173595	protein_coding	alternative1	2	1	157560107	927
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000171606	protein_coding		13	-1	59557319	3037
ENSMUSG00000049658	protein_coding	Bdp1	ENSMUST00000163097	nonsense_mediated_decay		13	-1	100103877	631
ENSMUSG00000039231	protein_coding	Suv39h1	ENSMUST00000127617	retained_intron		X	-1	8074313	1166
ENSMUSG00000035310	protein_coding	Lin54	ENSMUST00000154921	protein_coding	alternative1	5	-1	100498633	3734
ENSMUSG00000114206	lincRNA	Gm30551	ENSMUST00000225130	lincRNA		13	-1	103707633	1182
ENSMUSG00000068243	processed_pseudogene	Gm7079	ENSMUST00000119726	processed_pseudogene		X	1	8047229	171
ENSMUSG00000021748	protein_coding	Pdhb	ENSMUST00000022268	protein_coding	principal1	14	-1	8173025	1513
ENSMUSG00000063698	protein_coding	Sfxn4	ENSMUST00000124921	nonsense_mediated_decay		19	-1	60861424	1218
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000165370	protein_coding		13	-1	59557279	1086
ENSMUSG00000032010	protein_coding	Usp2	ENSMUST00000177422	processed_transcript		9	1	44092468	908
ENSMUSG00000114206	lincRNA	Gm30551	ENSMUST00000225860	lincRNA		13	-1	103707619	2133
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000151827	processed_transcript		13	-1	59514154	400
ENSMUSG00000032010	protein_coding	Usp2	ENSMUST00000176022	processed_transcript		9	1	44092674	417
ENSMUSG00000021748	protein_coding	Pdhb	ENSMUST00000225747	retained_intron		14	-1	8167096	620
ENSMUSG00000035310	protein_coding	Lin54	ENSMUST00000152387	protein_coding		5	-1	100498523	2760
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000129481	retained_intron		4	1	155409190	689
ENSMUSG00000032062	protein_coding	2310030G06Rik	ENSMUST00000034564	protein_coding	alternative2	9	-1	50746536	1257
ENSMUSG00000092258	sense_intronic	Gm20444	ENSMUST00000174014	sense_intronic		9	-1	44108879	648
ENSMUSG00000104452	IG_V_gene	Ighv8-8	ENSMUST00000192591	IG_V_gene	principal1	12	-1	115294504	358
ENSMUSG00000035310	protein_coding	Lin54	ENSMUST00000139234	nonsense_mediated_decay		5	-1	100498523	2686
ENSMUSG00000032062	protein_coding	2310030G06Rik	ENSMUST00000215877	retained_intron		9	-1	50746511	792
ENSMUSG00000029597	protein_coding	Sds	ENSMUST00000201684	protein_coding	principal1	5	1	120476526	1288
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000176300	nonsense_mediated_decay		15	-1	100595034	2522
ENSMUSG00000035310	protein_coding	Lin54	ENSMUST00000134439	nonsense_mediated_decay		5	-1	100485411	752
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000177202	nonsense_mediated_decay		15	-1	100595034	2776
ENSMUSG00000032062	protein_coding	2310030G06Rik	ENSMUST00000239417	protein_coding	principal2	9	-1	50746521	1242
ENSMUSG00000097467	antisense	Gm26737	ENSMUST00000181106	antisense		9	1	44112923	2151
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000230790	retained_intron		15	-1	100584212	736
ENSMUSG00000067786	protein_coding	Nnat	ENSMUST00000109526	protein_coding	principal4	2	1	157560110	1213
ENSMUSG00000040576	protein_coding	Tmem270	ENSMUST00000201316	protein_coding	principal1	5	-1	134906733	847
ENSMUSG00000021748	protein_coding	Pdhb	ENSMUST00000224466	processed_transcript		14	-1	8172981	459
ENSMUSG00000105404	processed_pseudogene	Gm42807	ENSMUST00000200141	processed_pseudogene		3	1	135483632	329
ENSMUSG00000097467	antisense	Gm26737	ENSMUST00000213646	antisense		9	1	44118122	432
ENSMUSG00000021748	protein_coding	Pdhb	ENSMUST00000225274	processed_transcript		14	-1	8172289	644
ENSMUSG00000035310	protein_coding	Lin54	ENSMUST00000046154	protein_coding	principal3	5	-1	100500626	4451
ENSMUSG00000021748	protein_coding	Pdhb	ENSMUST00000225735	retained_intron		14	-1	8172962	2377
ENSMUSG00000029597	protein_coding	Sds	ENSMUST00000066540	protein_coding	principal1	5	1	120476531	1207
ENSMUSG00000021609	protein_coding	Slc6a3	ENSMUST00000022100	protein_coding	principal1	13	1	73536747	3456
ENSMUSG00000053128	protein_coding	Rnf26	ENSMUST00000065379	nonsense_mediated_decay		9	-1	44113517	2833
ENSMUSG00000028989	protein_coding	Angptl7	ENSMUST00000030840	protein_coding	principal1	4	-1	148500460	2157
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000205510	retained_intron		15	-1	100592037	801
ENSMUSG00000067786	protein_coding	Nnat	ENSMUST00000173839	protein_coding		2	1	157560116	1135
ENSMUSG00000103644	lincRNA	Gm29678	ENSMUST00000193966	lincRNA		1	1	190403645	1134
ENSMUSG00000021748	protein_coding	Pdhb	ENSMUST00000224864	retained_intron		14	-1	8173025	1914
ENSMUSG00000040576	protein_coding	Tmem270	ENSMUST00000047305	protein_coding		5	-1	134906733	932
ENSMUSG00000021748	protein_coding	Pdhb	ENSMUST00000224690	retained_intron		14	-1	8172937	482
ENSMUSG00000022098	protein_coding	Bmp1	ENSMUST00000226906	nonsense_mediated_decay		14	-1	70520149	4340
ENSMUSG00000029597	protein_coding	Sds	ENSMUST00000111898	protein_coding		5	1	120478886	500
ENSMUSG00000053128	protein_coding	Rnf26	ENSMUST00000160985	nonsense_mediated_decay		9	-1	44111868	809
ENSMUSG00000103510	lincRNA	Gm30725	ENSMUST00000195170	lincRNA		1	-1	190444855	1419
ENSMUSG00000029597	protein_coding	Sds	ENSMUST00000124978	retained_intron		5	1	120480363	435
ENSMUSG00000098257	lincRNA	Gm27169	ENSMUST00000183344	lincRNA		8	1	87203026	746
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000167593	nonsense_mediated_decay		13	-1	59557311	1024
ENSMUSG00000053128	protein_coding	Rnf26	ENSMUST00000162196	processed_transcript		9	-1	44103088	521
ENSMUSG00000067786	protein_coding	Nnat	ENSMUST00000173041	protein_coding		2	1	157560121	760
ENSMUSG00000098768	lincRNA	Gm27207	ENSMUST00000184995	lincRNA		8	-1	87373075	878
ENSMUSG00000067786	protein_coding	Nnat	ENSMUST00000173793	protein_coding		2	1	157560123	386
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000177247	processed_transcript		15	-1	100599864	764
ENSMUSG00000098391	processed_transcript	Gm27208	ENSMUST00000184323	lincRNA		8	-1	87386929	604
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000177505	processed_transcript		15	-1	100599864	415
ENSMUSG00000053128	protein_coding	Rnf26	ENSMUST00000056328	protein_coding	principal2	9	-1	44113504	2724
ENSMUSG00000098391	processed_transcript	Gm27208	ENSMUST00000195652	TEC		8	-1	87387551	1105
ENSMUSG00000067786	protein_coding	Nnat	ENSMUST00000172487	protein_coding		2	1	157560124	404
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000123952	protein_coding	principal2	4	1	155409258	2365
ENSMUSG00000030754	protein_coding	Copb1	ENSMUST00000033012	protein_coding	principal1	7	-1	114254711	3346
ENSMUSG00000028991	protein_coding	Mtor	ENSMUST00000123566	retained_intron		4	1	148448611	2229
ENSMUSG00000067786	protein_coding	Nnat	ENSMUST00000088484	protein_coding		2	1	157560130	458
ENSMUSG00000098360	lincRNA	4930535O05Rik	ENSMUST00000184406	lincRNA		8	1	87458444	419
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000165851	nonsense_mediated_decay		13	-1	59534072	654
ENSMUSG00000053128	protein_coding	Rnf26	ENSMUST00000216511	protein_coding	alternative2	9	-1	44113473	2257
ENSMUSG00000020229	protein_coding	Slc5a4a	ENSMUST00000020450	protein_coding	principal1	10	1	76147451	2055
ENSMUSG00000053128	protein_coding	Rnf26	ENSMUST00000215685	protein_coding		9	-1	44113034	1804
ENSMUSG00000067786	protein_coding	Nnat	ENSMUST00000152605	retained_intron		2	1	157560140	1448
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000165598	nonsense_mediated_decay		13	-1	59557289	921
ENSMUSG00000030754	protein_coding	Copb1	ENSMUST00000209394	processed_transcript		7	-1	114218161	760
ENSMUSG00000038086	protein_coding	Hspb2	ENSMUST00000042790	protein_coding	principal1	9	-1	50752293	773
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000166585	protein_coding		13	-1	59557347	600
ENSMUSG00000110679	processed_pseudogene	Rpl10-ps5	ENSMUST00000212707	processed_pseudogene		8	1	94222993	642
ENSMUSG00000067786	protein_coding	Nnat	ENSMUST00000134513	retained_intron		2	1	157561009	599
ENSMUSG00000111409	protein_coding	Gm49380	ENSMUST00000162126	nonsense_mediated_decay		9	-1	44113500	2964
ENSMUSG00000030754	protein_coding	Copb1	ENSMUST00000211417	retained_intron		7	-1	114254691	2302
ENSMUSG00000110442	TEC	Gm45804	ENSMUST00000212137	TEC		8	1	94273426	3435
ENSMUSG00000111409	protein_coding	Gm49380	ENSMUST00000185479	protein_coding	principal1	9	-1	44113500	2964
ENSMUSG00000038086	protein_coding	Hspb2	ENSMUST00000217159	protein_coding		9	-1	50752354	552
ENSMUSG00000009739	protein_coding	Pou6f1	ENSMUST00000058274	protein_coding		15	-1	100595034	2523
ENSMUSG00000098620	antisense	Gm27209	ENSMUST00000183834	antisense		15	1	100595416	898
ENSMUSG00000098086	lincRNA	1700120C18Rik	ENSMUST00000182952	lincRNA		8	-1	87501231	985
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000167096	protein_coding		13	-1	59557300	508
ENSMUSG00000004768	protein_coding	Rab23	ENSMUST00000195006	processed_transcript		1	1	33719887	444
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000168821	protein_coding		13	-1	59558894	721
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000170378	protein_coding		13	-1	59556919	653
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000170520	protein_coding		13	-1	59585211	379
ENSMUSG00000061769	protein_coding	Klra6	ENSMUST00000074056	protein_coding	principal1	6	-1	130026954	1116
ENSMUSG00000038279	protein_coding	Nop2	ENSMUST00000044200	protein_coding	principal1	6	1	125131909	2597
ENSMUSG00000066189	protein_coding	Cacng3	ENSMUST00000084615	protein_coding	principal1	7	1	122670492	2777
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000169434	protein_coding		13	-1	59557037	453
ENSMUSG00000038279	protein_coding	Nop2	ENSMUST00000204185	protein_coding		6	1	125132033	579
ENSMUSG00000066189	protein_coding	Cacng3	ENSMUST00000182563	protein_coding		7	1	122671391	765
ENSMUSG00000027937	protein_coding	Jtb	ENSMUST00000029546	protein_coding	principal1	3	1	90231597	1101
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000039782	protein_coding	principal1	2	-1	161109022	10515
ENSMUSG00000066189	protein_coding	Cacng3	ENSMUST00000182095	protein_coding		7	1	122671418	914
ENSMUSG00000108718	TEC	Gm44749	ENSMUST00000206285	TEC		7	-1	122701918	1628
ENSMUSG00000099922	lincRNA	Gm29016	ENSMUST00000187523	lincRNA		1	1	59378930	1013
ENSMUSG00000027937	protein_coding	Jtb	ENSMUST00000119304	protein_coding		3	1	90231612	878
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000143081	processed_transcript		2	-1	160961521	735
ENSMUSG00000104502	TEC	Gm37737	ENSMUST00000195013	TEC		1	-1	59449502	1638
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000137152	processed_transcript		2	-1	160964796	764
ENSMUSG00000031654	protein_coding	Cbln1	ENSMUST00000034076	protein_coding	principal1	8	-1	87472609	2800
ENSMUSG00000021557	protein_coding	Agtpbp1	ENSMUST00000163284	processed_transcript		13	-1	59585227	3158
ENSMUSG00000027937	protein_coding	Jtb	ENSMUST00000157045	retained_intron		3	1	90231634	840
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000155918	retained_intron		2	-1	160985046	3970
ENSMUSG00000114526	TEC	A930015P04Rik	ENSMUST00000225984	TEC		13	1	59557566	772
ENSMUSG00000027937	protein_coding	Jtb	ENSMUST00000123839	retained_intron		3	1	90232047	545
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000134178	protein_coding		2	-1	161109022	3608
ENSMUSG00000031654	protein_coding	Cbln1	ENSMUST00000211279	processed_transcript		8	-1	87471068	1822
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000149866	retained_intron		2	-1	161008493	601
ENSMUSG00000031654	protein_coding	Cbln1	ENSMUST00000169693	protein_coding	principal1	8	-1	87472386	1699
ENSMUSG00000057003	protein_coding	Myh4	ENSMUST00000018632	protein_coding	principal1	11	1	67238029	6016
ENSMUSG00000039221	protein_coding	Rpl22l1	ENSMUST00000043867	protein_coding	principal3	3	1	28805436	552
ENSMUSG00000032060	protein_coding	Cryab	ENSMUST00000217475	protein_coding	principal1	9	1	50751325	1117
ENSMUSG00000024533	protein_coding	Spire1	ENSMUST00000115050	protein_coding	principal1	18	-1	67610790	5405
ENSMUSG00000068452	protein_coding	Duox2	ENSMUST00000053734	protein_coding	alternative2	2	-1	122298165	5744
ENSMUSG00000057003	protein_coding	Myh4	ENSMUST00000170942	protein_coding	principal1	11	1	67240597	5912
ENSMUSG00000032060	protein_coding	Cryab	ENSMUST00000214609	protein_coding		9	1	50751877	659
ENSMUSG00000068452	protein_coding	Duox2	ENSMUST00000237546	protein_coding	principal5	2	-1	122298449	6112
ENSMUSG00000024533	protein_coding	Spire1	ENSMUST00000224122	protein_coding		18	-1	67505734	3551
ENSMUSG00000021719	protein_coding	Rgs7bp	ENSMUST00000063551	protein_coding	principal1	13	-1	105054930	7077
ENSMUSG00000022098	protein_coding	Bmp1	ENSMUST00000022693	protein_coding	principal1	14	-1	70520188	3684
ENSMUSG00000039221	protein_coding	Rpl22l1	ENSMUST00000194649	protein_coding	alternative1	3	1	28805469	525
ENSMUSG00000068452	protein_coding	Duox2	ENSMUST00000155820	retained_intron		2	-1	122285569	1451
ENSMUSG00000022098	protein_coding	Bmp1	ENSMUST00000227944	nonsense_mediated_decay		14	-1	70508786	5365
ENSMUSG00000039221	protein_coding	Rpl22l1	ENSMUST00000195728	retained_intron		3	1	28805508	1908
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000138078	retained_intron		2	-1	161109075	3092
ENSMUSG00000022098	protein_coding	Bmp1	ENSMUST00000228501	processed_transcript		14	-1	70486639	507
ENSMUSG00000039221	protein_coding	Rpl22l1	ENSMUST00000193168	nonsense_mediated_decay		3	1	28805510	552
ENSMUSG00000032060	protein_coding	Cryab	ENSMUST00000034562	protein_coding	principal1	9	1	50752907	946
ENSMUSG00000022098	protein_coding	Bmp1	ENSMUST00000226246	nonsense_mediated_decay		14	-1	70520234	3472
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000137831	processed_transcript		2	-1	161018249	616
ENSMUSG00000004768	protein_coding	Rab23	ENSMUST00000140354	retained_intron		1	1	33719887	2557
ENSMUSG00000024533	protein_coding	Spire1	ENSMUST00000224799	protein_coding		18	-1	67549252	2059
ENSMUSG00000022098	protein_coding	Bmp1	ENSMUST00000226601	retained_intron		14	-1	70496054	2736
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000155066	processed_transcript		2	-1	161029548	646
ENSMUSG00000022098	protein_coding	Bmp1	ENSMUST00000226539	retained_intron		14	-1	70505456	452
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000033752	protein_coding		X	1	73673150	3964
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000130265	protein_coding		2	-1	161052578	675
ENSMUSG00000079852	protein_coding	Klra4	ENSMUST00000119096	protein_coding	principal1	6	-1	130067271	1245
ENSMUSG00000057133	protein_coding	Chd6	ENSMUST00000125179	retained_intron		2	-1	161109004	5051
ENSMUSG00000024533	protein_coding	Spire1	ENSMUST00000224659	retained_intron		18	-1	67497548	2251
ENSMUSG00000039221	protein_coding	Rpl22l1	ENSMUST00000195519	processed_transcript		3	1	28805565	138
ENSMUSG00000024533	protein_coding	Spire1	ENSMUST00000224189	retained_intron		18	-1	67496987	616
ENSMUSG00000066897	protein_coding	Olfr872	ENSMUST00000086474	protein_coding	principal1	9	1	20237119	1897
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000094408	processed_transcript		4	1	155409258	2949
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000108661	protein_coding	principal2	11	-1	69369406	7261
ENSMUSG00000024533	protein_coding	Spire1	ENSMUST00000226000	retained_intron		18	-1	67497729	612
ENSMUSG00000032060	protein_coding	Cryab	ENSMUST00000214962	protein_coding	principal1	9	1	50752993	846
ENSMUSG00000039221	protein_coding	Rpl22l1	ENSMUST00000191667	processed_transcript		3	1	28805597	553
ENSMUSG00000108099	processed_pseudogene	Gm43988	ENSMUST00000204972	processed_pseudogene		6	1	130083660	112
ENSMUSG00000032060	protein_coding	Cryab	ENSMUST00000216755	protein_coding	principal1	9	1	50753020	836
ENSMUSG00000047153	protein_coding	Khnyn	ENSMUST00000022831	protein_coding	principal1	14	1	55884947	3898
ENSMUSG00000024533	protein_coding	Spire1	ENSMUST00000045105	protein_coding		18	-1	67552721	5033
ENSMUSG00000039221	protein_coding	Rpl22l1	ENSMUST00000195827	processed_transcript		3	1	28805663	473
ENSMUSG00000072717	unprocessed_pseudogene	Klra11-ps	ENSMUST00000122033	unprocessed_pseudogene		6	-1	130094676	810
ENSMUSG00000032060	protein_coding	Cryab	ENSMUST00000216393	retained_intron		9	1	50754395	585
ENSMUSG00000039221	protein_coding	Rpl22l1	ENSMUST00000194092	retained_intron		3	1	28806458	553
ENSMUSG00000039748	protein_coding	Exo1	ENSMUST00000039725	protein_coding	principal1	1	1	175880581	7796
ENSMUSG00000103963	lincRNA	Gm30932	ENSMUST00000191893	lincRNA		1	1	190594326	274
ENSMUSG00000047686	protein_coding	Rtl3	ENSMUST00000062010	protein_coding	principal1	X	-1	106840644	2948
ENSMUSG00000024533	protein_coding	Spire1	ENSMUST00000082243	protein_coding		18	-1	67552777	4950
ENSMUSG00000039221	protein_coding	Rpl22l1	ENSMUST00000191691	retained_intron		3	1	28806499	590
ENSMUSG00000091695	processed_pseudogene	Gm17669	ENSMUST00000163749	processed_pseudogene		18	1	67562394	442
ENSMUSG00000047153	protein_coding	Khnyn	ENSMUST00000227462	retained_intron		14	1	55884974	4075
ENSMUSG00000104444	antisense	Gm33051	ENSMUST00000192940	antisense		3	-1	28813985	274
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000238797	protein_coding		11	-1	69348716	1264
ENSMUSG00000047153	protein_coding	Khnyn	ENSMUST00000228462	nonsense_mediated_decay		14	1	55885017	5882
ENSMUSG00000039748	protein_coding	Exo1	ENSMUST00000195196	protein_coding		1	1	175880794	488
ENSMUSG00000111039	TEC	Gm47000	ENSMUST00000214661	TEC		9	1	104101135	479
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000128981	protein_coding	alternative2	11	-1	69364779	5657
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000210935	lincRNA		8	1	87460469	1125
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000146930	retained_intron		11	-1	69347134	747
ENSMUSG00000048096	protein_coding	Lmod1	ENSMUST00000059352	protein_coding	principal1	1	1	135324807	3948
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000144332	retained_intron		11	-1	69354467	432
ENSMUSG00000059495	protein_coding	Arhgef12	ENSMUST00000165665	protein_coding	principal2	9	-1	43105987	10752
ENSMUSG00000046295	protein_coding	Ankle1	ENSMUST00000119976	protein_coding	principal3	8	1	71406010	2136
ENSMUSG00000023170	protein_coding	Gps2	ENSMUST00000072581	protein_coding	principal1	11	1	69913888	1311
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000151436	protein_coding		11	-1	69356610	591
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000180700	lincRNA		8	1	87472812	2314
ENSMUSG00000039748	protein_coding	Exo1	ENSMUST00000194306	protein_coding		1	1	175880796	968
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000182174	lincRNA		8	1	87472812	498
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000181159	lincRNA		8	1	87472812	682
ENSMUSG00000046295	protein_coding	Ankle1	ENSMUST00000120725	protein_coding	alternative2	8	1	71406024	1641
ENSMUSG00000039748	protein_coding	Exo1	ENSMUST00000193822	protein_coding		1	1	175880813	726
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000154046	protein_coding		11	-1	69361721	453
ENSMUSG00000059495	protein_coding	Arhgef12	ENSMUST00000213566	nonsense_mediated_decay		9	-1	43042632	555
ENSMUSG00000039748	protein_coding	Exo1	ENSMUST00000193858	protein_coding		1	1	175881183	600
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000180806	lincRNA		8	1	87472844	1452
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000182650	lincRNA		8	1	87473116	432
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000144701	protein_coding		11	-1	69361721	430
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000238423	protein_coding	alternative2	4	1	155409258	5622
ENSMUSG00000039748	protein_coding	Exo1	ENSMUST00000191680	protein_coding		1	1	175892882	738
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000211631	lincRNA		8	1	87473134	1432
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000238620	protein_coding	alternative2	4	1	155409258	5618
ENSMUSG00000059495	protein_coding	Arhgef12	ENSMUST00000215898	retained_intron		9	-1	43107239	2169
ENSMUSG00000059495	protein_coding	Arhgef12	ENSMUST00000217502	retained_intron		9	-1	43026660	1714
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000151083	protein_coding	alternative2	4	1	155409258	5487
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000182758	lincRNA		8	1	87473134	447
ENSMUSG00000039748	protein_coding	Exo1	ENSMUST00000194636	protein_coding		1	1	175901369	739
ENSMUSG00000023170	protein_coding	Gps2	ENSMUST00000057884	protein_coding	principal1	11	1	69914192	1220
ENSMUSG00000018474	protein_coding	Chd3	ENSMUST00000092971	protein_coding	alternative2	11	-1	69369391	6066
ENSMUSG00000025666	protein_coding	Tmem47	ENSMUST00000026760	protein_coding	principal1	X	1	81070716	4007
ENSMUSG00000037124	protein_coding	Trim58	ENSMUST00000075084	protein_coding	principal1	11	1	58640465	2192
ENSMUSG00000087090	processed_transcript	Nctc1	ENSMUST00000132167	lincRNA		7	-1	142558596	2104
ENSMUSG00000059495	protein_coding	Arhgef12	ENSMUST00000214175	retained_intron		9	-1	43027818	848
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000181898	lincRNA		8	1	87473157	1303
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000211487	lincRNA		8	1	87473394	489
ENSMUSG00000087090	processed_transcript	Nctc1	ENSMUST00000123668	retained_intron		7	-1	142558596	2663
ENSMUSG00000049929	protein_coding	Lpar4	ENSMUST00000060576	protein_coding	principal1	X	1	106920625	4238
ENSMUSG00000097248	lincRNA	Gm2694	ENSMUST00000210170	lincRNA		8	1	87502912	171
ENSMUSG00000039748	protein_coding	Exo1	ENSMUST00000193610	retained_intron		1	1	175904235	517
ENSMUSG00000039748	protein_coding	Exo1	ENSMUST00000194816	protein_coding		1	1	175904373	466
ENSMUSG00000097992	lincRNA	Gm27016	ENSMUST00000183294	lincRNA		8	-1	87495462	715
ENSMUSG00000025666	protein_coding	Tmem47	ENSMUST00000150052	processed_transcript		X	1	81070698	586
ENSMUSG00000107047	lincRNA	Gm43298	ENSMUST00000200887	lincRNA		5	-1	150882642	866
ENSMUSG00000023170	protein_coding	Gps2	ENSMUST00000124596	processed_transcript		11	1	69914845	534
ENSMUSG00000059495	protein_coding	Arhgef12	ENSMUST00000072767	protein_coding	alternative1	9	-1	43105486	10059
ENSMUSG00000023170	protein_coding	Gps2	ENSMUST00000134581	protein_coding		11	1	69916041	431
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000050128	retained_intron		4	1	155421906	2838
ENSMUSG00000025666	protein_coding	Tmem47	ENSMUST00000171953	protein_coding	principal1	X	1	81070705	1801
ENSMUSG00000111133	processed_pseudogene	Gm5831	ENSMUST00000216016	processed_pseudogene		9	1	42964872	1209
ENSMUSG00000021718	protein_coding	Nt5el	ENSMUST00000022232	protein_coding	principal1	13	1	105082122	2157
ENSMUSG00000098295	lincRNA	Gm19872	ENSMUST00000183446	lincRNA		8	1	87460469	687
ENSMUSG00000039748	protein_coding	Exo1	ENSMUST00000192378	processed_transcript		1	1	175907569	424
ENSMUSG00000023170	protein_coding	Gps2	ENSMUST00000116358	protein_coding	principal1	11	1	69914050	1159
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000165947	processed_transcript		4	1	155429868	1248
ENSMUSG00000083637	processed_pseudogene	Gm14754	ENSMUST00000119762	processed_pseudogene		X	-1	81272495	726
ENSMUSG00000106692	lincRNA	Gm36447	ENSMUST00000201101	lincRNA		5	1	150822859	1978
ENSMUSG00000031955	protein_coding	Bcar1	ENSMUST00000166232	protein_coding	principal3	8	-1	111743809	3142
ENSMUSG00000107545	processed_pseudogene	Gm44307	ENSMUST00000204466	processed_pseudogene		6	-1	94324034	764
ENSMUSG00000024132	protein_coding	Eci1	ENSMUST00000234304	protein_coding	principal2	17	1	24426641	1137
ENSMUSG00000105403	TEC	Gm43618	ENSMUST00000197392	TEC		3	1	151836505	3451
ENSMUSG00000107435	processed_pseudogene	Gm19908	ENSMUST00000204684	processed_pseudogene		6	1	94349534	391
ENSMUSG00000074676	protein_coding	Foxs1	ENSMUST00000099200	protein_coding	principal1	2	-1	152933208	1311
ENSMUSG00000107616	processed_pseudogene	Gm7825	ENSMUST00000204046	processed_pseudogene		6	1	94417829	416
ENSMUSG00000024132	protein_coding	Eci1	ENSMUST00000024946	protein_coding	alternative2	17	1	24426683	1086
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000227211	protein_coding		14	-1	55899855	543
ENSMUSG00000031955	protein_coding	Bcar1	ENSMUST00000212349	protein_coding	alternative2	8	-1	111732136	3116
ENSMUSG00000024132	protein_coding	Eci1	ENSMUST00000234019	retained_intron		17	1	24426702	859
ENSMUSG00000059623	protein_coding	Olfr39	ENSMUST00000212983	protein_coding	principal1	9	1	20282351	2028
ENSMUSG00000031955	protein_coding	Bcar1	ENSMUST00000212147	retained_intron		8	-1	111732105	2007
ENSMUSG00000046295	protein_coding	Ankle1	ENSMUST00000124520	retained_intron		8	1	71406022	1935
ENSMUSG00000024132	protein_coding	Eci1	ENSMUST00000234150	protein_coding		17	1	24426704	633
ENSMUSG00000059623	protein_coding	Olfr39	ENSMUST00000071725	protein_coding		9	1	20282351	1098
ENSMUSG00000024132	protein_coding	Eci1	ENSMUST00000234731	retained_intron		17	1	24426854	540
ENSMUSG00000063434	protein_coding	Sorcs3	ENSMUST00000078880	protein_coding	principal1	19	1	48206025	5634
ENSMUSG00000024132	protein_coding	Eci1	ENSMUST00000234023	protein_coding	alternative2	17	1	24426991	1108
ENSMUSG00000067229	protein_coding	Cyp2c66	ENSMUST00000087234	protein_coding	principal1	19	1	39113898	1630
ENSMUSG00000041075	protein_coding	Fzd7	ENSMUST00000114246	protein_coding	principal1	1	1	59482424	4532
ENSMUSG00000024132	protein_coding	Eci1	ENSMUST00000235124	retained_intron		17	1	24437384	499
ENSMUSG00000063434	protein_coding	Sorcs3	ENSMUST00000236094	retained_intron		19	1	48429960	2011
ENSMUSG00000115169	lincRNA	Gm30563	ENSMUST00000227720	lincRNA		15	1	64396379	2031
ENSMUSG00000115169	lincRNA	Gm30563	ENSMUST00000226656	lincRNA		15	1	64396379	2198
ENSMUSG00000046295	protein_coding	Ankle1	ENSMUST00000125290	retained_intron		8	1	71406016	2410
ENSMUSG00000063434	protein_coding	Sorcs3	ENSMUST00000235967	processed_transcript		19	1	48704216	2788
ENSMUSG00000111964	processed_pseudogene	Gm8942	ENSMUST00000217892	processed_pseudogene		10	1	115269978	400
ENSMUSG00000046295	protein_coding	Ankle1	ENSMUST00000136522	retained_intron		8	1	71407691	627
ENSMUSG00000108529	processed_pseudogene	Gm29759	ENSMUST00000205860	processed_pseudogene		7	1	122837963	327
ENSMUSG00000097819	lincRNA	Gm26813	ENSMUST00000180778	lincRNA		1	-1	59492605	3587
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000111325	protein_coding	principal1	14	-1	55900258	1255
ENSMUSG00000067229	protein_coding	Cyp2c66	ENSMUST00000146494	nonsense_mediated_decay		19	1	39113910	1771
ENSMUSG00000032557	protein_coding	Uba5	ENSMUST00000035166	protein_coding	principal1	9	-1	104063134	2404
ENSMUSG00000084267	processed_pseudogene	Gm12417	ENSMUST00000119153	processed_pseudogene		4	1	85176527	403
ENSMUSG00000108832	antisense	Gm44832	ENSMUST00000208849	antisense		7	-1	44595879	2303
ENSMUSG00000028036	protein_coding	Ptgfr	ENSMUST00000029670	protein_coding	principal1	3	-1	151837630	6624
ENSMUSG00000021944	protein_coding	Gata4	ENSMUST00000118022	protein_coding	principal3	14	-1	63245248	3374
ENSMUSG00000039298	protein_coding	Cdk5rap2	ENSMUST00000144099	protein_coding	principal1	4	-1	70410443	11847
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000164449	protein_coding		X	1	73673707	2151
ENSMUSG00000024997	protein_coding	Prdx3	ENSMUST00000025961	protein_coding	principal1	19	-1	60874556	1478
ENSMUSG00000028036	protein_coding	Ptgfr	ENSMUST00000106126	protein_coding	principal1	3	-1	151836023	1535
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000135407	retained_intron		4	1	155451570	2377
ENSMUSG00000004768	protein_coding	Rab23	ENSMUST00000088287	protein_coding	principal1	1	1	33719895	4322
ENSMUSG00000008843	protein_coding	Cldn13	ENSMUST00000008987	protein_coding	principal1	5	-1	134915526	1067
ENSMUSG00000041889	protein_coding	Shisa4	ENSMUST00000041240	protein_coding	principal1	1	-1	135375237	1763
ENSMUSG00000107781	processed_pseudogene	Gm44315	ENSMUST00000203041	processed_pseudogene		6	-1	94484398	219
ENSMUSG00000028036	protein_coding	Ptgfr	ENSMUST00000128349	processed_transcript		3	-1	151834155	279
ENSMUSG00000001630	protein_coding	Stk38l	ENSMUST00000001675	protein_coding	principal1	6	1	146724995	4550
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000114465	protein_coding	principal1	X	1	73673785	3314
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000144157	retained_intron		4	1	155461890	2466
ENSMUSG00000021944	protein_coding	Gata4	ENSMUST00000067417	protein_coding	alternative2	14	-1	63245271	3400
ENSMUSG00000041889	protein_coding	Shisa4	ENSMUST00000159181	retained_intron		1	-1	135375077	851
ENSMUSG00000085256	antisense	Dmrta2os	ENSMUST00000124754	antisense		4	-1	109977491	517
ENSMUSG00000001630	protein_coding	Stk38l	ENSMUST00000111644	protein_coding		6	1	146725036	2274
ENSMUSG00000118369	processed_transcript	Gm30541	ENSMUST00000236942	antisense		19	-1	53325725	1202
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000144625	retained_intron		4	1	155461937	2808
ENSMUSG00000118369	processed_transcript	Gm30541	ENSMUST00000237210	retained_intron		19	-1	53325743	2130
ENSMUSG00000085256	antisense	Dmrta2os	ENSMUST00000141893	antisense		4	-1	109977813	691
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000146796	retained_intron		X	1	73673919	940
ENSMUSG00000001630	protein_coding	Stk38l	ENSMUST00000203318	protein_coding		6	1	146725312	411
ENSMUSG00000031557	protein_coding	Plekha2	ENSMUST00000064883	protein_coding	principal1	8	-1	25102376	5176
ENSMUSG00000078490	protein_coding	Cfap74	ENSMUST00000105619	protein_coding	alternative2	4	1	155451570	2364
ENSMUSG00000108108	TEC	Gm44270	ENSMUST00000203084	TEC		6	1	146762581	1234
ENSMUSG00000041889	protein_coding	Shisa4	ENSMUST00000159918	retained_intron		1	-1	135373450	1404
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000168831	protein_coding		X	1	73673958	1919
ENSMUSG00000030615	protein_coding	Tmem126a	ENSMUST00000136652	nonsense_mediated_decay		7	-1	90457208	756
ENSMUSG00000021944	protein_coding	Gata4	ENSMUST00000121312	protein_coding		14	-1	63213607	2407
ENSMUSG00000035173	protein_coding	Ccdc186	ENSMUST00000118592	protein_coding	principal1	19	-1	56822190	6445
ENSMUSG00000104274	processed_pseudogene	Gm8823	ENSMUST00000193158	processed_pseudogene		3	-1	7193210	433
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000171398	protein_coding		X	1	73675507	537
ENSMUSG00000035173	protein_coding	Ccdc186	ENSMUST00000135666	protein_coding		19	-1	56795155	724
ENSMUSG00000096960	lincRNA	A230028O05Rik	ENSMUST00000181655	lincRNA		16	1	25059639	2793
ENSMUSG00000031557	protein_coding	Plekha2	ENSMUST00000128715	protein_coding	principal1	8	-1	25101985	3463
ENSMUSG00000021944	protein_coding	Gata4	ENSMUST00000132122	protein_coding		14	-1	63271692	653
ENSMUSG00000004768	protein_coding	Rab23	ENSMUST00000138024	nonsense_mediated_decay		1	1	33719909	4398
ENSMUSG00000039298	protein_coding	Cdk5rap2	ENSMUST00000076541	nonsense_mediated_decay		4	-1	70410418	5248
ENSMUSG00000035173	protein_coding	Ccdc186	ENSMUST00000140705	retained_intron		19	-1	56797508	691
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000114464	nonsense_mediated_decay		X	1	73676846	2729
ENSMUSG00000004768	protein_coding	Rab23	ENSMUST00000135330	retained_intron		1	1	33719910	2047
ENSMUSG00000021944	protein_coding	Gata4	ENSMUST00000137244	protein_coding		14	-1	63271124	683
ENSMUSG00000035173	protein_coding	Ccdc186	ENSMUST00000156708	retained_intron		19	-1	56800986	758
ENSMUSG00000004768	protein_coding	Rab23	ENSMUST00000151482	retained_intron		1	1	33720138	1087
ENSMUSG00000039298	protein_coding	Cdk5rap2	ENSMUST00000126416	processed_transcript		4	-1	70403541	517
ENSMUSG00000031557	protein_coding	Plekha2	ENSMUST00000098866	protein_coding		8	-1	25101771	1158
ENSMUSG00000021944	protein_coding	Gata4	ENSMUST00000156782	protein_coding		14	-1	63271124	599
ENSMUSG00000047143	protein_coding	Dmrta2	ENSMUST00000061187	protein_coding	principal1	4	1	109978053	2922
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000168764	retained_intron		X	1	73677059	843
ENSMUSG00000039298	protein_coding	Cdk5rap2	ENSMUST00000138561	protein_coding		4	-1	70264680	1171
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000170614	retained_intron		X	1	73678154	1613
ENSMUSG00000084803	processed_transcript	5830444B04Rik	ENSMUST00000166921	processed_transcript		4	-1	155421704	2870
ENSMUSG00000114892	lincRNA	Gm5463	ENSMUST00000226066	lincRNA		14	1	63329220	1799
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000166200	processed_transcript		X	1	73678878	404
ENSMUSG00000004768	protein_coding	Rab23	ENSMUST00000115174	protein_coding	principal1	1	1	33720407	4218
ENSMUSG00000039298	protein_coding	Cdk5rap2	ENSMUST00000140108	protein_coding		4	-1	70254736	711
ENSMUSG00000035173	protein_coding	Ccdc186	ENSMUST00000140184	retained_intron		19	-1	56822190	1041
ENSMUSG00000031557	protein_coding	Plekha2	ENSMUST00000211708	processed_transcript		8	-1	25102154	403
ENSMUSG00000117953	processed_pseudogene	Gm50264	ENSMUST00000237713	processed_pseudogene		19	-1	30531929	454
ENSMUSG00000031557	protein_coding	Plekha2	ENSMUST00000125466	protein_coding		8	-1	25091346	374
ENSMUSG00000114898	lincRNA	Gm49390	ENSMUST00000225064	lincRNA		14	1	63317745	1801
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000170574	retained_intron		X	1	73678893	527
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000167828	retained_intron		X	1	73678893	493
ENSMUSG00000035173	protein_coding	Ccdc186	ENSMUST00000076085	protein_coding	principal1	19	-1	56813683	2754
ENSMUSG00000084803	processed_transcript	5830444B04Rik	ENSMUST00000152780	processed_transcript		4	-1	155414777	1446
ENSMUSG00000004768	protein_coding	Rab23	ENSMUST00000150593	retained_intron		1	1	33734528	1966
ENSMUSG00000058816	processed_pseudogene	Ppp1r2-ps3	ENSMUST00000078012	processed_pseudogene		19	-1	30539545	618
ENSMUSG00000004768	protein_coding	Rab23	ENSMUST00000122822	retained_intron		1	1	33736657	437
ENSMUSG00000084803	processed_transcript	5830444B04Rik	ENSMUST00000145520	processed_transcript		4	-1	155421695	2757
ENSMUSG00000109750	unprocessed_pseudogene	Hmgb1-rs17	ENSMUST00000210634	unprocessed_pseudogene		8	1	33484196	972
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000214072	retained_intron		9	-1	57158277	1941
ENSMUSG00000084803	processed_transcript	5830444B04Rik	ENSMUST00000166858	processed_transcript		4	-1	155414756	388
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000213161	retained_intron		9	-1	57155473	437
ENSMUSG00000004768	protein_coding	Rab23	ENSMUST00000132066	retained_intron		1	1	33738137	1764
ENSMUSG00000019558	protein_coding	Slc6a8	ENSMUST00000114467	protein_coding	principal1	X	1	73673242	2509
ENSMUSG00000107261	processed_pseudogene	Trmt112-ps1	ENSMUST00000202320	processed_pseudogene		5	-1	91738079	375
ENSMUSG00000030615	protein_coding	Tmem126a	ENSMUST00000032844	protein_coding	principal1	7	-1	90457229	799
ENSMUSG00000094422	protein_coding	Olfr205	ENSMUST00000213910	protein_coding	principal1	16	-1	59331138	1650
ENSMUSG00000106917	processed_pseudogene	Gm7832	ENSMUST00000202613	processed_pseudogene		5	-1	91761575	880
ENSMUSG00000062785	protein_coding	Kcnc3	ENSMUST00000209177	protein_coding	alternative2	7	1	44590664	2960
ENSMUSG00000094422	protein_coding	Olfr205	ENSMUST00000074125	protein_coding	principal1	16	-1	59329532	990
ENSMUSG00000000031	lincRNA	H19	ENSMUST00000136359	lincRNA		7	-1	142578143	2286
ENSMUSG00000000031	lincRNA	H19	ENSMUST00000132294	lincRNA		7	-1	142576910	1217
ENSMUSG00000030615	protein_coding	Tmem126a	ENSMUST00000207159	processed_transcript		7	-1	90457102	466
ENSMUSG00000000031	lincRNA	H19	ENSMUST00000228514	lincRNA		7	-1	142576959	1178
ENSMUSG00000000031	lincRNA	H19	ENSMUST00000152754	lincRNA		7	-1	142577386	1521
ENSMUSG00000030615	protein_coding	Tmem126a	ENSMUST00000153393	retained_intron		7	-1	90457153	397
ENSMUSG00000032557	protein_coding	Uba5	ENSMUST00000144195	nonsense_mediated_decay		9	-1	104062998	1156
ENSMUSG00000030615	protein_coding	Tmem126a	ENSMUST00000208639	retained_intron		7	-1	90457185	1730
ENSMUSG00000000031	lincRNA	H19	ENSMUST00000140716	lincRNA		7	-1	142576538	817
ENSMUSG00000000031	lincRNA	H19	ENSMUST00000149974	lincRNA		7	-1	142578095	935
ENSMUSG00000062785	protein_coding	Kcnc3	ENSMUST00000207493	protein_coding	alternative2	7	1	44590664	2731
ENSMUSG00000062785	protein_coding	Kcnc3	ENSMUST00000208651	protein_coding	alternative2	7	1	44590664	2728
ENSMUSG00000000031	lincRNA	H19	ENSMUST00000228259	lincRNA		7	-1	142577933	761
ENSMUSG00000115328	lincRNA	Gm30691	ENSMUST00000227641	lincRNA		15	-1	64633508	595
ENSMUSG00000032557	protein_coding	Uba5	ENSMUST00000140768	nonsense_mediated_decay		9	-1	104063063	1214
ENSMUSG00000032557	protein_coding	Uba5	ENSMUST00000191568	retained_intron		9	-1	104060462	4130
ENSMUSG00000032557	protein_coding	Uba5	ENSMUST00000214222	nonsense_mediated_decay		9	-1	104062905	809
ENSMUSG00000024868	protein_coding	Dkk1	ENSMUST00000025803	protein_coding	principal1	19	-1	30549665	2427
ENSMUSG00000062785	protein_coding	Kcnc3	ENSMUST00000107907	protein_coding	principal2	7	1	44590664	5281
ENSMUSG00000101152	protein_coding	Gm28305	ENSMUST00000147249	protein_coding	principal1	9	1	104040662	365
ENSMUSG00000062785	protein_coding	Kcnc3	ENSMUST00000107906	protein_coding	alternative2	7	1	44590886	5062
ENSMUSG00000062785	protein_coding	Kcnc3	ENSMUST00000208412	processed_transcript		7	1	44593995	757
ENSMUSG00000085845	antisense	Gm13944	ENSMUST00000146495	antisense		2	1	77462669	542
ENSMUSG00000062785	protein_coding	Kcnc3	ENSMUST00000207497	nonsense_mediated_decay		7	1	44596093	792
ENSMUSG00000079355	protein_coding	Ackr4	ENSMUST00000050139	processed_transcript		9	-1	104102560	2698
ENSMUSG00000117930	TEC	Gm50436	ENSMUST00000236384	TEC		19	1	48811136	2360
ENSMUSG00000090939	processed_pseudogene	Gm17147	ENSMUST00000164176	processed_pseudogene		6	1	65128571	432
ENSMUSG00000118014	TEC	4930535F04Rik	ENSMUST00000236524	TEC		19	-1	48991981	1513
ENSMUSG00000085845	antisense	Gm13944	ENSMUST00000126572	antisense		2	1	77462677	721
ENSMUSG00000117996	lincRNA	Gm50441	ENSMUST00000235703	lincRNA		19	1	48992084	238
ENSMUSG00000118111	lincRNA	Gm50442	ENSMUST00000236912	lincRNA		19	1	49090673	741
ENSMUSG00000037406	protein_coding	Htra4	ENSMUST00000084031	protein_coding	principal1	8	-1	25038962	2180
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000129077	processed_transcript		2	-1	77819639	693
ENSMUSG00000117931	unprocessed_pseudogene	Gm50444	ENSMUST00000238143	unprocessed_pseudogene		19	1	49554018	841
ENSMUSG00000079355	protein_coding	Ackr4	ENSMUST00000076147	protein_coding	principal1	9	-1	104126933	2389
ENSMUSG00000079355	protein_coding	Ackr4	ENSMUST00000219146	protein_coding	principal1	9	-1	104101011	1654
ENSMUSG00000079355	protein_coding	Ackr4	ENSMUST00000188000	protein_coding	principal1	9	-1	104103019	2225
ENSMUSG00000058488	protein_coding	Kl	ENSMUST00000078856	protein_coding	principal1	5	1	150952607	5118
ENSMUSG00000037406	protein_coding	Htra4	ENSMUST00000176814	retained_intron		8	-1	25037417	901
ENSMUSG00000014453	protein_coding	Blk	ENSMUST00000014597	protein_coding	principal1	14	-1	63417037	2326
ENSMUSG00000055679	protein_coding	Ctsr	ENSMUST00000021889	protein_coding	principal1	13	-1	61164256	1414
ENSMUSG00000110148	processed_transcript	5830408C22Rik	ENSMUST00000210072	antisense		8	1	25101216	1115
ENSMUSG00000058488	protein_coding	Kl	ENSMUST00000202096	retained_intron		5	1	150952704	5828
ENSMUSG00000014453	protein_coding	Blk	ENSMUST00000224965	retained_intron		14	-1	63376418	622
ENSMUSG00000110148	processed_transcript	5830408C22Rik	ENSMUST00000211653	antisense		8	1	25102179	351
ENSMUSG00000110125	lincRNA	Gm33148	ENSMUST00000210835	lincRNA		7	1	142591744	7227
ENSMUSG00000110148	processed_transcript	5830408C22Rik	ENSMUST00000210596	antisense		8	1	25102520	326
ENSMUSG00000110148	processed_transcript	5830408C22Rik	ENSMUST00000210097	retained_intron		8	1	25106998	2989
ENSMUSG00000118047	lincRNA	4930554I06Rik	ENSMUST00000237543	lincRNA		19	1	21104502	1053
ENSMUSG00000049028	protein_coding	Olfr873	ENSMUST00000213445	processed_transcript		9	1	20298532	3094
ENSMUSG00000118047	lincRNA	4930554I06Rik	ENSMUST00000236278	lincRNA		19	1	21104502	971
ENSMUSG00000049028	protein_coding	Olfr873	ENSMUST00000215540	protein_coding	alternative2	9	1	20298532	3784
ENSMUSG00000003228	protein_coding	Grk5	ENSMUST00000003313	protein_coding	principal1	19	1	60889749	6580
ENSMUSG00000025436	protein_coding	Atp23	ENSMUST00000026504	protein_coding		10	-1	126901355	903
ENSMUSG00000047547	protein_coding	Cltb	ENSMUST00000091609	protein_coding	principal3	13	-1	54611344	2186
ENSMUSG00000118047	lincRNA	4930554I06Rik	ENSMUST00000237768	lincRNA		19	1	21104710	589
ENSMUSG00000050147	protein_coding	F2rl3	ENSMUST00000058099	protein_coding	principal1	8	1	72761880	1751
ENSMUSG00000049028	protein_coding	Olfr873	ENSMUST00000075717	protein_coding	alternative2	9	1	20298595	991
ENSMUSG00000047547	protein_coding	Cltb	ENSMUST00000140142	protein_coding		13	-1	54599161	584
ENSMUSG00000050147	protein_coding	F2rl3	ENSMUST00000212755	retained_intron		8	1	72761884	1504
ENSMUSG00000049028	protein_coding	Olfr873	ENSMUST00000216567	processed_transcript		9	1	20298607	3163
ENSMUSG00000049028	protein_coding	Olfr873	ENSMUST00000212793	processed_transcript		9	1	20298641	4815
ENSMUSG00000025436	protein_coding	Atp23	ENSMUST00000168520	protein_coding	principal1	10	-1	126901348	1043
ENSMUSG00000049028	protein_coding	Olfr873	ENSMUST00000217193	processed_transcript		9	1	20298641	3299
ENSMUSG00000027896	protein_coding	Slc16a4	ENSMUST00000029502	protein_coding	principal3	3	1	107291230	2248
ENSMUSG00000110696	TEC	Gm45706	ENSMUST00000213063	TEC		8	-1	72767616	2136
ENSMUSG00000029919	protein_coding	Hpgds	ENSMUST00000031982	protein_coding	principal1	6	-1	65144908	3476
ENSMUSG00000110481	TEC	Gm45705	ENSMUST00000211831	TEC		8	1	72765481	2134
ENSMUSG00000049028	protein_coding	Olfr873	ENSMUST00000053919	protein_coding	principal2	9	1	20300129	1062
ENSMUSG00000028681	protein_coding	Ptch2	ENSMUST00000030443	protein_coding	principal1	4	1	117096075	4382
ENSMUSG00000027938	protein_coding	Creb3l4	ENSMUST00000029547	protein_coding	principal1	3	-1	90243512	1553
ENSMUSG00000033386	protein_coding	Frrs1	ENSMUST00000040260	protein_coding	principal1	3	1	116859464	2377
ENSMUSG00000029919	protein_coding	Hpgds	ENSMUST00000205250	retained_intron		6	-1	65122927	3891
ENSMUSG00000025436	protein_coding	Atp23	ENSMUST00000220051	processed_transcript		10	-1	126901350	3461
ENSMUSG00000003228	protein_coding	Grk5	ENSMUST00000235623	retained_intron		19	1	60890395	568
ENSMUSG00000027896	protein_coding	Slc16a4	ENSMUST00000153322	retained_intron		3	1	107291294	2531
ENSMUSG00000112423	processed_pseudogene	Gm6333	ENSMUST00000218775	processed_pseudogene		10	1	126893113	796
ENSMUSG00000029919	protein_coding	Hpgds	ENSMUST00000170252	retained_intron		6	-1	65138271	420
ENSMUSG00000003228	protein_coding	Grk5	ENSMUST00000236876	protein_coding		19	1	60890463	634
ENSMUSG00000033386	protein_coding	Frrs1	ENSMUST00000199626	nonsense_mediated_decay		3	1	116859567	626
ENSMUSG00000027896	protein_coding	Slc16a4	ENSMUST00000106723	protein_coding	alternative2	3	1	107291315	1781
ENSMUSG00000066257	protein_coding	Olfr206	ENSMUST00000207927	protein_coding	principal1	16	-1	59349246	1122
ENSMUSG00000047547	protein_coding	Cltb	ENSMUST00000049575	protein_coding	alternative1	13	-1	54611292	1004
ENSMUSG00000027938	protein_coding	Creb3l4	ENSMUST00000107369	protein_coding	principal1	3	-1	90243143	1404
ENSMUSG00000031697	protein_coding	Orc6	ENSMUST00000211597	protein_coding		8	1	85299632	777
ENSMUSG00000095607	TR_V_gene	Trav5-4	ENSMUST00000103664	TR_V_gene	principal1	14	1	53704007	343
ENSMUSG00000066257	protein_coding	Olfr206	ENSMUST00000084791	protein_coding	principal1	16	-1	59345726	1005
ENSMUSG00000031697	protein_coding	Orc6	ENSMUST00000211396	protein_coding		8	1	85299632	887
ENSMUSG00000047547	protein_coding	Cltb	ENSMUST00000146301	retained_intron		13	-1	54611292	3174
ENSMUSG00000074733	protein_coding	Zfp950	ENSMUST00000122927	nonsense_mediated_decay		19	-1	61140795	1204
ENSMUSG00000013921	protein_coding	Clip3	ENSMUST00000145253	retained_intron		7	1	30291728	634
ENSMUSG00000033386	protein_coding	Frrs1	ENSMUST00000195905	protein_coding	principal1	3	1	116878227	6823
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000227032	nonsense_mediated_decay		14	-1	55900211	1023
ENSMUSG00000095706	protein_coding	Olfr209	ENSMUST00000213779	protein_coding		16	-1	59363952	564
ENSMUSG00000095126	TR_V_gene	Trav6-7-dv9	ENSMUST00000103638	TR_V_gene	principal1	14	1	53709902	379
ENSMUSG00000063549	protein_coding	Olfr322	ENSMUST00000214400	nonsense_mediated_decay		11	1	58658782	4527
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000227163	processed_transcript		14	-1	55900184	792
ENSMUSG00000063549	protein_coding	Olfr322	ENSMUST00000216442	nonsense_mediated_decay		11	1	58658803	4449
ENSMUSG00000028681	protein_coding	Ptch2	ENSMUST00000144620	nonsense_mediated_decay		4	1	117096096	4356
ENSMUSG00000063549	protein_coding	Olfr322	ENSMUST00000217399	nonsense_mediated_decay		11	1	58658813	4460
ENSMUSG00000033386	protein_coding	Frrs1	ENSMUST00000199584	retained_intron		3	1	116890894	416
ENSMUSG00000063549	protein_coding	Olfr322	ENSMUST00000214392	protein_coding	principal1	11	1	58658816	4779
ENSMUSG00000095706	protein_coding	Olfr209	ENSMUST00000208875	protein_coding	principal1	16	-1	59363993	1194
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000226427	processed_transcript		14	-1	55900115	813
ENSMUSG00000074733	protein_coding	Zfp950	ENSMUST00000127290	nonsense_mediated_decay		19	-1	61140840	2753
ENSMUSG00000013921	protein_coding	Clip3	ENSMUST00000150892	protein_coding		7	1	30291729	561
ENSMUSG00000028681	protein_coding	Ptch2	ENSMUST00000156989	retained_intron		4	1	117104920	544
ENSMUSG00000063549	protein_coding	Olfr322	ENSMUST00000213793	nonsense_mediated_decay		11	1	58658981	4549
ENSMUSG00000063549	protein_coding	Olfr322	ENSMUST00000213232	protein_coding	principal1	11	1	58659020	4632
ENSMUSG00000096138	TR_V_gene	Trav7-6	ENSMUST00000103641	TR_V_gene		14	1	53716716	381
ENSMUSG00000033386	protein_coding	Frrs1	ENSMUST00000197323	retained_intron		3	1	116891674	573
ENSMUSG00000074733	protein_coding	Zfp950	ENSMUST00000181469	retained_intron		19	-1	61117373	841
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000227268	retained_intron		14	-1	55900163	909
ENSMUSG00000096138	TR_V_gene	Trav7-6	ENSMUST00000184687	TR_V_gene	principal1	14	1	53717015	275
ENSMUSG00000013921	protein_coding	Clip3	ENSMUST00000126216	protein_coding		7	1	30291739	369
ENSMUSG00000028681	protein_coding	Ptch2	ENSMUST00000137209	nonsense_mediated_decay		4	1	117105238	708
ENSMUSG00000095706	protein_coding	Olfr209	ENSMUST00000208246	protein_coding		16	-1	59362240	428
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000227387	protein_coding		14	-1	55899913	416
ENSMUSG00000074733	protein_coding	Zfp950	ENSMUST00000205854	protein_coding		19	-1	61140817	466
ENSMUSG00000033386	protein_coding	Frrs1	ENSMUST00000199030	protein_coding		3	1	116896710	394
ENSMUSG00000082663	TR_V_pseudogene	Trav13-3	ENSMUST00000117226	TR_V_pseudogene		14	1	53729558	336
ENSMUSG00000063549	protein_coding	Olfr322	ENSMUST00000072030	protein_coding	principal1	11	1	58665561	984
ENSMUSG00000085302	TR_V_pseudogene	Trav8-2	ENSMUST00000130122	TR_V_pseudogene		14	1	53738375	337
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000227139	retained_intron		14	-1	55900228	867
ENSMUSG00000095706	protein_coding	Olfr209	ENSMUST00000055868	protein_coding	principal1	16	-1	59362216	918
ENSMUSG00000074733	protein_coding	Zfp950	ENSMUST00000127117	nonsense_mediated_decay		19	-1	61140819	676
ENSMUSG00000028681	protein_coding	Ptch2	ENSMUST00000135133	retained_intron		4	1	117110235	590
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000228209	retained_intron		14	-1	55899980	846
ENSMUSG00000074733	protein_coding	Zfp950	ENSMUST00000205712	nonsense_mediated_decay		19	-1	61140770	524
ENSMUSG00000081787	processed_pseudogene	Gm13991	ENSMUST00000120190	processed_pseudogene		2	-1	116528490	648
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000227499	processed_transcript		14	-1	55900293	498
ENSMUSG00000032558	protein_coding	Nphp3	ENSMUST00000193642	retained_intron		9	1	104002544	3925
ENSMUSG00000028681	protein_coding	Ptch2	ENSMUST00000123226	retained_intron		4	1	117113424	2293
ENSMUSG00000052310	protein_coding	Slc39a1	ENSMUST00000015467	protein_coding	principal1	3	1	90248172	2364
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000227712	retained_intron		14	-1	55900209	650
ENSMUSG00000074733	protein_coding	Zfp950	ENSMUST00000180544	protein_coding	principal1	19	-1	61140762	2568
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000227965	retained_intron		14	-1	55900179	709
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000226273	nonsense_mediated_decay		14	-1	55900211	351
ENSMUSG00000074733	protein_coding	Zfp950	ENSMUST00000143264	protein_coding		19	-1	61140790	4825
ENSMUSG00000074733	protein_coding	Zfp950	ENSMUST00000178819	protein_coding		19	-1	61119590	171
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000226338	retained_intron		14	-1	55900199	831
ENSMUSG00000112035	lincRNA	Gm49335	ENSMUST00000217769	lincRNA		10	1	126958023	1686
ENSMUSG00000074733	protein_coding	Zfp950	ENSMUST00000148569	protein_coding		19	-1	61127564	192
ENSMUSG00000096578	processed_pseudogene	Gm9529	ENSMUST00000177598	processed_pseudogene		19	-1	60967252	580
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000226746	retained_intron		14	-1	55900211	501
ENSMUSG00000034739	protein_coding	Mfrp	ENSMUST00000034654	protein_coding	principal3	9	1	44101729	4316
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000228151	retained_intron		14	-1	55900212	385
ENSMUSG00000085793	protein_coding	Lin52	ENSMUST00000137170	protein_coding	principal1	12	1	84451422	2270
ENSMUSG00000022223	protein_coding	Sdr39u1	ENSMUST00000227677	retained_intron		14	-1	55900197	546
ENSMUSG00000021969	protein_coding	Zdhhc20	ENSMUST00000089473	protein_coding	principal1	14	-1	57890276	5186
ENSMUSG00000034739	protein_coding	Mfrp	ENSMUST00000161703	nonsense_mediated_decay		9	1	44101738	1608
ENSMUSG00000085793	protein_coding	Lin52	ENSMUST00000221033	protein_coding		12	1	84456248	498
ENSMUSG00000107944	TEC	Gm44280	ENSMUST00000204498	TEC		6	1	113416472	3111
ENSMUSG00000021969	protein_coding	Zdhhc20	ENSMUST00000226057	protein_coding		14	-1	57890222	2179
ENSMUSG00000027225	protein_coding	Duoxa2	ENSMUST00000028656	protein_coding	principal1	2	1	122298900	1592
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000065358	protein_coding	principal1	9	-1	57158331	858
ENSMUSG00000085793	protein_coding	Lin52	ENSMUST00000221172	retained_intron		12	1	84457396	762
ENSMUSG00000021969	protein_coding	Zdhhc20	ENSMUST00000226029	processed_transcript		14	-1	57839161	465
ENSMUSG00000029992	protein_coding	Gfpt1	ENSMUST00000113657	protein_coding		6	1	87042846	1200
ENSMUSG00000085793	protein_coding	Lin52	ENSMUST00000222741	processed_transcript		12	1	84530044	447
ENSMUSG00000031697	protein_coding	Orc6	ENSMUST00000170141	protein_coding		8	1	85299689	1466
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000169266	protein_coding	principal1	7	1	25267704	8221
ENSMUSG00000110585	unprocessed_pseudogene	Gm45704	ENSMUST00000212582	unprocessed_pseudogene		8	-1	72784333	403
ENSMUSG00000000440	protein_coding	Pparg	ENSMUST00000171644	protein_coding	alternative1	6	1	115360951	2125
ENSMUSG00000021969	protein_coding	Zdhhc20	ENSMUST00000224133	processed_transcript		14	-1	57843306	299
ENSMUSG00000110563	processed_pseudogene	Gm45791	ENSMUST00000212908	processed_pseudogene		8	-1	72795487	352
ENSMUSG00000093610	transcribed_unprocessed_pseudogene	Cyp2c53-ps	ENSMUST00000176493	processed_transcript		19	1	39229254	1443
ENSMUSG00000093610	transcribed_unprocessed_pseudogene	Cyp2c53-ps	ENSMUST00000175960	transcribed_unprocessed_pseudogene		19	1	39229284	1370
ENSMUSG00000021969	protein_coding	Zdhhc20	ENSMUST00000225955	retained_intron		14	-1	57890220	2356
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000169392	protein_coding		7	1	25268387	596
ENSMUSG00000093610	transcribed_unprocessed_pseudogene	Cyp2c53-ps	ENSMUST00000175649	processed_transcript		19	1	39256127	897
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000169743	processed_transcript		7	1	25278422	333
ENSMUSG00000109780	antisense	Gm45447	ENSMUST00000209874	antisense		2	1	161109411	1805
ENSMUSG00000000440	protein_coding	Pparg	ENSMUST00000203732	protein_coding	alternative1	6	1	115362292	1826
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000164440	processed_transcript		7	1	25279641	175
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000214174	nonsense_mediated_decay		9	-1	57156223	579
ENSMUSG00000020955	protein_coding	Ap4s1	ENSMUST00000218820	protein_coding		12	1	51691033	757
ENSMUSG00000031697	protein_coding	Orc6	ENSMUST00000034132	protein_coding	principal1	8	1	85299791	1287
ENSMUSG00000000440	protein_coding	Pparg	ENSMUST00000204305	protein_coding		6	1	115362349	497
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000214640	protein_coding		9	-1	57157139	703
ENSMUSG00000000440	protein_coding	Pparg	ENSMUST00000203308	retained_intron		6	1	115362350	213
ENSMUSG00000013921	protein_coding	Clip3	ENSMUST00000014065	protein_coding	principal1	7	1	30291753	3300
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000217018	protein_coding		9	-1	57157134	388
ENSMUSG00000000440	protein_coding	Pparg	ENSMUST00000205213	protein_coding		6	1	115383699	835
ENSMUSG00000031697	protein_coding	Orc6	ENSMUST00000209733	retained_intron		8	1	85299827	921
ENSMUSG00000110279	antisense	Gm45552	ENSMUST00000209340	antisense		7	1	45121917	778
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000215013	protein_coding		9	-1	57157139	492
ENSMUSG00000031697	protein_coding	Orc6	ENSMUST00000210146	nonsense_mediated_decay		8	1	85299923	1041
ENSMUSG00000013921	protein_coding	Clip3	ENSMUST00000144508	protein_coding		7	1	30291958	496
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000173616	retained_intron		17	-1	34026758	534
ENSMUSG00000031697	protein_coding	Orc6	ENSMUST00000210458	retained_intron		8	1	85306058	461
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000215500	retained_intron		9	-1	57156848	770
ENSMUSG00000028991	protein_coding	Mtor	ENSMUST00000103221	protein_coding	principal1	4	1	148448611	8564
ENSMUSG00000020955	protein_coding	Ap4s1	ENSMUST00000021338	protein_coding	principal1	12	1	51691037	1035
ENSMUSG00000013921	protein_coding	Clip3	ENSMUST00000125935	retained_intron		7	1	30297117	676
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000213580	nonsense_mediated_decay		9	-1	57157125	472
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000216031	retained_intron		9	-1	57156975	458
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000214325	retained_intron		9	-1	57156828	527
ENSMUSG00000034739	protein_coding	Mfrp	ENSMUST00000206308	protein_coding	alternative2	9	1	44101754	4037
ENSMUSG00000013921	protein_coding	Clip3	ENSMUST00000132844	retained_intron		7	1	30303902	647
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000214097	protein_coding		9	-1	57157123	246
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000111831	protein_coding	principal3	2	-1	77816816	2734
ENSMUSG00000032299	protein_coding	Commd4	ENSMUST00000214212	processed_transcript		9	-1	57158316	414
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000100074	protein_coding	principal3	16	1	20589471	2512
ENSMUSG00000000440	protein_coding	Pparg	ENSMUST00000000450	protein_coding	principal3	6	1	115422066	1767
ENSMUSG00000028991	protein_coding	Mtor	ENSMUST00000057580	protein_coding		4	1	148448625	1003
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000163320	protein_coding		7	1	25282179	6096
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000111829	protein_coding		2	-1	77817259	2073
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000131610	nonsense_mediated_decay		3	1	135485611	2683
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000007207	protein_coding	principal2	16	-1	20716117	3128
ENSMUSG00000034739	protein_coding	Mfrp	ENSMUST00000161381	protein_coding	alternative2	9	1	44101770	4254
ENSMUSG00000053181	protein_coding	A830005F24Rik	ENSMUST00000065465	protein_coding	principal1	13	1	48513570	786
ENSMUSG00000028991	protein_coding	Mtor	ENSMUST00000129715	retained_intron		4	1	148544413	598
ENSMUSG00000000440	protein_coding	Pparg	ENSMUST00000203896	retained_intron		6	1	115439975	915
ENSMUSG00000000127	protein_coding	Fer	ENSMUST00000233225	protein_coding		17	1	63863062	657
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000159736	processed_transcript		16	1	20589582	251
ENSMUSG00000028917	protein_coding	Plekhm2	ENSMUST00000084203	protein_coding	principal3	4	-1	141664118	4136
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000162919	processed_transcript		16	1	20589584	449
ENSMUSG00000034739	protein_coding	Mfrp	ENSMUST00000205282	nonsense_mediated_decay		9	1	44101788	742
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000165239	protein_coding		7	1	25282810	3500
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000128583	processed_transcript		2	-1	77519535	679
ENSMUSG00000038599	protein_coding	Capn8	ENSMUST00000193260	processed_transcript		1	1	182565007	2483
ENSMUSG00000108141	antisense	Gm44079	ENSMUST00000204889	antisense		6	-1	115464990	529
ENSMUSG00000028917	protein_coding	Plekhm2	ENSMUST00000030751	protein_coding	alternative2	4	-1	141664899	4154
ENSMUSG00000034739	protein_coding	Mfrp	ENSMUST00000206722	protein_coding		9	1	44105176	561
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000151388	processed_transcript		2	-1	77703379	2304
ENSMUSG00000081605	processed_pseudogene	Gm15953	ENSMUST00000117656	processed_pseudogene		16	1	38512565	1732
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000161257	protein_coding		16	1	20589851	726
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000135756	processed_transcript		2	-1	77703272	535
ENSMUSG00000105501	lincRNA	5330426L24Rik	ENSMUST00000200008	lincRNA		14	-1	54351636	2175
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000161715	processed_transcript		16	1	20590059	422
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000137160	processed_transcript		2	-1	77561980	673
ENSMUSG00000028917	protein_coding	Plekhm2	ENSMUST00000136102	retained_intron		4	-1	141629536	902
ENSMUSG00000083843	processed_pseudogene	Gm7071	ENSMUST00000120458	processed_pseudogene		X	-1	58709656	462
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000145251	processed_transcript		2	-1	77519614	542
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000145483	retained_intron		16	1	20590090	1983
ENSMUSG00000028917	protein_coding	Plekhm2	ENSMUST00000150229	retained_intron		4	-1	141631047	270
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000149236	nonsense_mediated_decay		16	1	20590146	2335
ENSMUSG00000106426	lincRNA	Gm36211	ENSMUST00000198171	lincRNA		3	-1	107833539	1497
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000232279	protein_coding		16	1	20590165	703
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000232474	protein_coding		16	1	20590213	727
ENSMUSG00000028917	protein_coding	Plekhm2	ENSMUST00000140223	retained_intron		4	-1	141642195	812
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000111830	protein_coding		2	-1	77519618	2642
ENSMUSG00000009628	protein_coding	Tex15	ENSMUST00000149399	protein_coding		8	1	33516738	706
ENSMUSG00000028917	protein_coding	Plekhm2	ENSMUST00000141844	retained_intron		4	-1	141642762	511
ENSMUSG00000035129	processed_pseudogene	Gm6781	ENSMUST00000038304	processed_pseudogene		14	1	18531363	1242
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000171063	protein_coding	alternative1	2	-1	77703272	2668
ENSMUSG00000027016	protein_coding	Zfp385b	ENSMUST00000090766	protein_coding	principal3	2	-1	77719739	2740
ENSMUSG00000002846	protein_coding	Timmdc1	ENSMUST00000002925	protein_coding	principal1	16	-1	38522663	1573
ENSMUSG00000027224	protein_coding	Duoxa1	ENSMUST00000110537	protein_coding	principal1	2	-1	122313693	1506
ENSMUSG00000003429	protein_coding	Rps11	ENSMUST00000003521	protein_coding	principal1	7	-1	45124439	661
ENSMUSG00000027224	protein_coding	Duoxa1	ENSMUST00000110538	protein_coding		2	-1	122306848	2467
ENSMUSG00000002846	protein_coding	Timmdc1	ENSMUST00000147543	processed_transcript		16	-1	38522641	678
ENSMUSG00000027224	protein_coding	Duoxa1	ENSMUST00000155561	processed_transcript		2	-1	122305711	1883
ENSMUSG00000042662	protein_coding	Dusp15	ENSMUST00000123121	protein_coding	principal1	2	-1	152951456	2993
ENSMUSG00000009628	protein_coding	Tex15	ENSMUST00000124496	protein_coding		8	1	33517324	4014
ENSMUSG00000106140	lincRNA	Gm42208	ENSMUST00000198215	lincRNA		3	-1	36274660	670
ENSMUSG00000027224	protein_coding	Duoxa1	ENSMUST00000148417	protein_coding		2	-1	122313730	904
ENSMUSG00000105281	processed_pseudogene	Gm17835	ENSMUST00000196870	processed_pseudogene		3	-1	36395197	499
ENSMUSG00000003429	protein_coding	Rps11	ENSMUST00000209838	protein_coding		7	-1	45123528	449
ENSMUSG00000027224	protein_coding	Duoxa1	ENSMUST00000154412	protein_coding		2	-1	122313651	744
ENSMUSG00000105792	processed_pseudogene	Gm17887	ENSMUST00000200194	processed_pseudogene		3	1	36421576	547
ENSMUSG00000009628	protein_coding	Tex15	ENSMUST00000124501	nonsense_mediated_decay		8	1	33517324	2626
ENSMUSG00000042662	protein_coding	Dusp15	ENSMUST00000185197	retained_intron		2	-1	152944556	3535
ENSMUSG00000003429	protein_coding	Rps11	ENSMUST00000211725	protein_coding		7	-1	45124335	493
ENSMUSG00000027224	protein_coding	Duoxa1	ENSMUST00000147788	protein_coding		2	-1	122313644	779
ENSMUSG00000003429	protein_coding	Rps11	ENSMUST00000211583	retained_intron		7	-1	45124351	514
ENSMUSG00000027224	protein_coding	Duoxa1	ENSMUST00000028653	protein_coding	principal1	2	-1	122306826	1026
ENSMUSG00000006699	protein_coding	Cdc42	ENSMUST00000051477	protein_coding	principal3	4	-1	137357720	2108
ENSMUSG00000092552	processed_pseudogene	Gm4287	ENSMUST00000174329	processed_pseudogene		6	1	90235689	585
ENSMUSG00000052056	protein_coding	Zfp217	ENSMUST00000109155	protein_coding	principal1	2	-1	170142678	5670
ENSMUSG00000106963	processed_pseudogene	Gm8675	ENSMUST00000201408	processed_pseudogene		5	-1	151009301	1856
ENSMUSG00000042662	protein_coding	Dusp15	ENSMUST00000037715	protein_coding		2	-1	152951582	715
ENSMUSG00000031954	protein_coding	Cfdp1	ENSMUST00000034432	protein_coding	principal1	8	-1	111854291	1178
ENSMUSG00000009628	protein_coding	Tex15	ENSMUST00000009772	protein_coding	principal1	8	1	33570544	8405
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000163819	processed_transcript		7	1	25283217	456
ENSMUSG00000110466	unprocessed_pseudogene	Gm45815	ENSMUST00000220241	unprocessed_pseudogene		9	-1	20313633	146
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000168956	retained_intron		7	1	25284670	745
ENSMUSG00000052056	protein_coding	Zfp217	ENSMUST00000149088	processed_transcript		2	-1	170131220	594
ENSMUSG00000109216	TEC	Gm44907	ENSMUST00000207423	TEC		7	1	90457252	1633
ENSMUSG00000006699	protein_coding	Cdc42	ENSMUST00000030417	protein_coding	alternative1	4	-1	137357699	1448
ENSMUSG00000003053	protein_coding	Cyp2c29	ENSMUST00000176624	protein_coding	alternative2	19	1	39269405	1759
ENSMUSG00000052056	protein_coding	Zfp217	ENSMUST00000125162	processed_transcript		2	-1	170133945	282
ENSMUSG00000020029	protein_coding	Nudt4	ENSMUST00000020217	protein_coding	principal1	10	-1	95564146	3210
ENSMUSG00000052056	protein_coding	Zfp217	ENSMUST00000149318	processed_transcript		2	-1	170148103	373
ENSMUSG00000042662	protein_coding	Dusp15	ENSMUST00000109811	protein_coding		2	-1	152951698	753
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000167379	retained_intron		7	1	25285823	4732
ENSMUSG00000052056	protein_coding	Zfp217	ENSMUST00000063710	protein_coding	principal1	2	-1	170131220	5685
ENSMUSG00000066896	protein_coding	Olfr18	ENSMUST00000212943	protein_coding	alternative2	9	-1	20336094	2896
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000165742	retained_intron		7	1	25289263	358
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000159780	protein_coding	alternative2	16	1	20591156	4042
ENSMUSG00000114529	processed_pseudogene	Gm4939	ENSMUST00000224515	processed_pseudogene		14	-1	18545132	1325
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000164820	protein_coding		7	1	25291171	344
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000046188	retained_intron		16	1	20602775	2518
ENSMUSG00000066896	protein_coding	Olfr18	ENSMUST00000211895	processed_transcript		9	-1	20335993	1066
ENSMUSG00000076855	TR_V_gene	Trav16	ENSMUST00000103667	TR_V_gene	principal1	14	1	53743104	420
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000170500	retained_intron		7	1	25291208	764
ENSMUSG00000097375	lincRNA	6720427I07Rik	ENSMUST00000181490	lincRNA		13	-1	48546500	5598
ENSMUSG00000066896	protein_coding	Olfr18	ENSMUST00000086473	protein_coding	principal2	9	-1	20336094	1156
ENSMUSG00000115276	TEC	9930017N22Rik	ENSMUST00000228274	TEC		15	1	34126944	3745
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000231608	retained_intron		16	1	20603847	348
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000167162	retained_intron		7	1	25291935	428
ENSMUSG00000103373	TEC	Gm37238	ENSMUST00000195552	TEC		13	-1	48545033	2390
ENSMUSG00000003053	protein_coding	Cyp2c29	ENSMUST00000003137	protein_coding	principal2	19	1	39287074	1783
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000163901	protein_coding		7	1	25293020	455
ENSMUSG00000100249	protein_coding	Btbd35f23	ENSMUST00000189190	protein_coding	principal1	X	1	3076875	1943
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000029814	protein_coding	principal1	3	1	135485611	3675
ENSMUSG00000046613	protein_coding	Vwa5b2	ENSMUST00000096197	protein_coding	alternative2	16	1	20589582	4527
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000172082	retained_intron		15	1	34082694	4582
ENSMUSG00000031953	protein_coding	Tmem170	ENSMUST00000034431	protein_coding	principal1	8	-1	111876750	3878
ENSMUSG00000005442	protein_coding	Cic	ENSMUST00000005578	protein_coding		7	1	25282179	6099
ENSMUSG00000003053	protein_coding	Cyp2c29	ENSMUST00000177087	nonsense_mediated_decay		19	1	39287074	2822
ENSMUSG00000048399	protein_coding	Tprg	ENSMUST00000056087	protein_coding	principal1	16	1	25286817	1084
ENSMUSG00000097891	unprocessed_pseudogene	Gm3650	ENSMUST00000180600	unprocessed_pseudogene		18	1	43472816	747
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000140893	retained_intron		3	1	135485619	2534
ENSMUSG00000096426	protein_coding	Btbd35f24	ENSMUST00000178080	protein_coding	principal1	X	-1	3195827	1941
ENSMUSG00000048399	protein_coding	Tprg	ENSMUST00000128595	retained_intron		16	1	25286821	1186
ENSMUSG00000107711	protein_coding	Olfr320	ENSMUST00000214662	protein_coding	principal1	11	1	58681099	3029
ENSMUSG00000107788	processed_pseudogene	Gm6266	ENSMUST00000203844	processed_pseudogene		6	1	146782469	806
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000144654	retained_intron		3	1	135485625	2183
ENSMUSG00000107711	protein_coding	Olfr320	ENSMUST00000204718	protein_coding	principal1	11	1	58683875	928
ENSMUSG00000084298	processed_pseudogene	Gm14331	ENSMUST00000120396	processed_pseudogene		X	1	3225600	409
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000123061	processed_transcript		3	1	135517150	638
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000148131	retained_intron		16	-1	20716114	3757
ENSMUSG00000082495	processed_pseudogene	Gm12570	ENSMUST00000122047	processed_pseudogene		11	-1	58689102	1030
ENSMUSG00000031952	protein_coding	Chst5	ENSMUST00000034430	protein_coding	principal1	8	-1	111910447	2182
ENSMUSG00000021441	protein_coding	Cts6	ENSMUST00000021890	protein_coding	principal1	13	-1	61203410	1356
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000134095	processed_transcript		3	1	135522935	276
ENSMUSG00000050921	protein_coding	P2ry10	ENSMUST00000053375	protein_coding	principal1	X	1	107089278	2888
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000140496	retained_intron		3	1	135544656	535
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000147872	processed_transcript		3	1	135548904	604
ENSMUSG00000099754	unprocessed_pseudogene	Vmn1r-ps34	ENSMUST00000174046	unprocessed_pseudogene		6	1	90242272	943
ENSMUSG00000031535	protein_coding	Dkk4	ENSMUST00000033936	protein_coding	principal1	8	1	22624043	1315
ENSMUSG00000050921	protein_coding	P2ry10	ENSMUST00000150494	protein_coding		X	1	107088492	2704
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000130147	processed_transcript		3	1	135550559	634
ENSMUSG00000073002	protein_coding	Vamp5	ENSMUST00000206154	protein_coding		6	-1	72372135	2619
ENSMUSG00000050921	protein_coding	P2ry10	ENSMUST00000118666	protein_coding	principal1	X	1	107089234	2757
ENSMUSG00000106906	lincRNA	Gm34728	ENSMUST00000201510	lincRNA		5	1	77434034	414
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000134478	processed_transcript		3	1	135550630	599
ENSMUSG00000115219	protein_coding	Eef1akmt4	ENSMUST00000115522	protein_coding	principal1	16	1	20611593	1134
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000153075	retained_intron		16	-1	20716164	3511
ENSMUSG00000107232	lincRNA	1700017L05Rik	ENSMUST00000201654	lincRNA		5	1	77465488	558
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000120099	protein_coding	alternative2	16	-1	20716111	2812
ENSMUSG00000028164	protein_coding	Manba	ENSMUST00000153412	processed_transcript		3	1	135563191	511
ENSMUSG00000083045	processed_pseudogene	Gm16100	ENSMUST00000120489	processed_pseudogene		3	1	135495653	231
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000232309	protein_coding	alternative2	16	-1	20716112	2730
ENSMUSG00000083610	processed_pseudogene	Oaz2-ps	ENSMUST00000121735	processed_pseudogene		3	-1	135526532	537
ENSMUSG00000047203	protein_coding	Vmn1r54	ENSMUST00000226921	protein_coding	principal1	6	1	90246300	3234
ENSMUSG00000115219	protein_coding	Eef1akmt4	ENSMUST00000119224	protein_coding		16	1	20611601	1464
ENSMUSG00000104909	lincRNA	Gm43617	ENSMUST00000196418	lincRNA		3	1	151887303	606
ENSMUSG00000021752	protein_coding	Kctd6	ENSMUST00000022272	protein_coding	principal1	14	1	8214140	1650
ENSMUSG00000047203	protein_coding	Vmn1r54	ENSMUST00000058039	protein_coding	principal1	6	1	90269106	948
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000131522	nonsense_mediated_decay		16	-1	20717746	3944
ENSMUSG00000043424	protein_coding	Eif3j2	ENSMUST00000057110	protein_coding	principal1	18	-1	43477796	2379
ENSMUSG00000108119	TEC	Gm43891	ENSMUST00000205132	TEC		6	1	90296222	3112
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000144400	retained_intron		16	-1	20709126	999
ENSMUSG00000021752	protein_coding	Kctd6	ENSMUST00000170111	protein_coding	principal1	14	1	8214502	3052
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000123417	retained_intron		16	-1	20708734	600
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000236627	protein_coding		17	-1	34028042	733
ENSMUSG00000051169	protein_coding	Rpusd3	ENSMUST00000113092	protein_coding	principal2	6	-1	113419340	1269
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000231381	nonsense_mediated_decay		16	-1	20712388	733
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000131833	retained_intron		16	-1	20711965	725
ENSMUSG00000073002	protein_coding	Vamp5	ENSMUST00000101285	protein_coding	principal1	6	-1	72380422	623
ENSMUSG00000051169	protein_coding	Rpusd3	ENSMUST00000060634	protein_coding		6	-1	113419319	1224
ENSMUSG00000022843	protein_coding	Clcn2	ENSMUST00000132512	retained_intron		16	-1	20713668	794
ENSMUSG00000054293	protein_coding	P2ry10b	ENSMUST00000067249	protein_coding	principal1	X	1	107149615	3004
ENSMUSG00000030614	protein_coding	Tmem126b	ENSMUST00000032843	protein_coding	principal1	7	-1	90476001	2259
ENSMUSG00000051169	protein_coding	Rpusd3	ENSMUST00000203758	retained_intron		6	-1	113416452	321
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000176555	nonsense_mediated_decay		14	-1	18888449	1200
ENSMUSG00000051169	protein_coding	Rpusd3	ENSMUST00000129047	protein_coding	alternative2	6	-1	113419319	1045
ENSMUSG00000051169	protein_coding	Rpusd3	ENSMUST00000147726	protein_coding	alternative2	6	-1	113419310	805
ENSMUSG00000030614	protein_coding	Tmem126b	ENSMUST00000123622	retained_intron		7	-1	90475995	2898
ENSMUSG00000054293	protein_coding	P2ry10b	ENSMUST00000147521	protein_coding		X	1	107148927	784
ENSMUSG00000073002	protein_coding	Vamp5	ENSMUST00000074231	protein_coding	principal1	6	-1	72380468	553
ENSMUSG00000087102	lincRNA	Gm13661	ENSMUST00000154297	lincRNA		2	1	77840616	318
ENSMUSG00000097893	antisense	1700034P13Rik	ENSMUST00000181821	antisense		1	1	9747648	1996
ENSMUSG00000032558	protein_coding	Nphp3	ENSMUST00000035167	protein_coding	principal2	9	1	104002546	5899
ENSMUSG00000064044	protein_coding	Olfr319	ENSMUST00000215238	processed_transcript		11	1	58699168	2260
ENSMUSG00000054293	protein_coding	P2ry10b	ENSMUST00000125676	protein_coding		X	1	107149454	763
ENSMUSG00000003227	protein_coding	Edar	ENSMUST00000003312	protein_coding	principal1	10	-1	58675654	3637
ENSMUSG00000064044	protein_coding	Olfr319	ENSMUST00000215962	protein_coding	principal1	11	1	58699162	2500
ENSMUSG00000097893	antisense	1700034P13Rik	ENSMUST00000181358	antisense		1	1	9747956	1343
ENSMUSG00000054293	protein_coding	P2ry10b	ENSMUST00000137107	protein_coding		X	1	107149598	414
ENSMUSG00000054293	protein_coding	P2ry10b	ENSMUST00000167673	protein_coding	principal1	X	1	107148927	3044
ENSMUSG00000032558	protein_coding	Nphp3	ENSMUST00000194774	protein_coding	alternative2	9	1	104002654	4722
ENSMUSG00000027499	protein_coding	Pkia	ENSMUST00000192468	protein_coding		3	1	7366669	315
ENSMUSG00000051169	protein_coding	Rpusd3	ENSMUST00000124078	retained_intron		6	-1	113419319	782
ENSMUSG00000097893	antisense	1700034P13Rik	ENSMUST00000191287	antisense		1	1	9748481	661
ENSMUSG00000064044	protein_coding	Olfr319	ENSMUST00000076965	protein_coding	principal1	11	1	58701703	921
ENSMUSG00000051169	protein_coding	Rpusd3	ENSMUST00000151618	protein_coding		6	-1	113419314	549
ENSMUSG00000054293	protein_coding	P2ry10b	ENSMUST00000180182	protein_coding	principal1	X	1	107149454	2997
ENSMUSG00000020954	protein_coding	Strn3	ENSMUST00000013130	protein_coding	principal3	12	-1	51691887	3046
ENSMUSG00000097893	antisense	1700034P13Rik	ENSMUST00000189431	antisense		1	1	9748587	555
ENSMUSG00000097893	antisense	1700034P13Rik	ENSMUST00000207445	antisense		1	1	9748589	1146
ENSMUSG00000097893	antisense	1700034P13Rik	ENSMUST00000209020	antisense		1	1	9748626	264
ENSMUSG00000032558	protein_coding	Nphp3	ENSMUST00000191919	retained_intron		9	1	104002758	1893
ENSMUSG00000051169	protein_coding	Rpusd3	ENSMUST00000134853	retained_intron		6	-1	113419048	522
ENSMUSG00000084013	processed_pseudogene	Gm14270	ENSMUST00000118388	processed_pseudogene		2	1	170285035	846
ENSMUSG00000097893	antisense	1700034P13Rik	ENSMUST00000189322	antisense		1	1	9783778	379
ENSMUSG00000108265	protein_coding	Olfr318	ENSMUST00000214728	protein_coding	principal1	11	-1	58724014	4552
ENSMUSG00000027499	protein_coding	Pkia	ENSMUST00000028999	protein_coding	principal1	3	1	7366670	3617
ENSMUSG00000051169	protein_coding	Rpusd3	ENSMUST00000129560	protein_coding		6	-1	113419331	365
ENSMUSG00000032558	protein_coding	Nphp3	ENSMUST00000193439	nonsense_mediated_decay		9	1	104002767	3761
ENSMUSG00000032939	protein_coding	Nup93	ENSMUST00000079961	protein_coding	principal1	8	1	94214564	2707
ENSMUSG00000104770	processed_pseudogene	Gm2939	ENSMUST00000198496	processed_pseudogene		3	1	151959185	478
ENSMUSG00000108265	protein_coding	Olfr318	ENSMUST00000213944	processed_transcript		11	-1	58723984	3552
ENSMUSG00000051169	protein_coding	Rpusd3	ENSMUST00000150452	retained_intron		6	-1	113419323	752
ENSMUSG00000032558	protein_coding	Nphp3	ENSMUST00000192485	retained_intron		9	1	104031860	336
ENSMUSG00000108265	protein_coding	Olfr318	ENSMUST00000189911	protein_coding	principal1	11	-1	58721094	1026
ENSMUSG00000027499	protein_coding	Pkia	ENSMUST00000193330	protein_coding	principal1	3	1	7429058	631
ENSMUSG00000032558	protein_coding	Nphp3	ENSMUST00000194183	protein_coding		9	1	104035848	418
ENSMUSG00000104725	processed_pseudogene	Gm2860	ENSMUST00000199226	processed_pseudogene		3	-1	151973508	707
ENSMUSG00000032939	protein_coding	Nup93	ENSMUST00000212039	retained_intron		8	1	94214577	647
ENSMUSG00000020954	protein_coding	Strn3	ENSMUST00000169503	protein_coding	alternative1	12	-1	51691897	2791
ENSMUSG00000032558	protein_coding	Nphp3	ENSMUST00000216593	protein_coding		9	1	104040622	279
ENSMUSG00000103274	processed_pseudogene	Gm37918	ENSMUST00000192071	processed_pseudogene		3	-1	7418459	120
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000130916	protein_coding	principal1	11	-1	101302286	4365
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000150727	protein_coding	principal1	14	-1	18893776	1523
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000237759	protein_coding		17	-1	34028054	1133
ENSMUSG00000032939	protein_coding	Nup93	ENSMUST00000212824	protein_coding	principal1	8	1	94214601	2928
ENSMUSG00000020954	protein_coding	Strn3	ENSMUST00000218212	retained_intron		12	-1	51643798	3701
ENSMUSG00000116828	processed_pseudogene	Gm18896	ENSMUST00000232460	processed_pseudogene		16	-1	25443273	1271
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000175643	protein_coding		14	-1	18888297	757
ENSMUSG00000104659	lincRNA	Gm43619	ENSMUST00000197267	lincRNA		3	1	151988454	914
ENSMUSG00000105035	processed_pseudogene	Gm9682	ENSMUST00000197505	processed_pseudogene		3	-1	152071801	556
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000176672	processed_transcript		14	-1	18597241	328
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000176843	protein_coding		14	-1	18888393	438
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000045467	protein_coding	principal1	17	-1	34028056	965
ENSMUSG00000082630	processed_pseudogene	Gm14834	ENSMUST00000119416	processed_pseudogene		X	-1	107175494	795
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000226053	protein_coding	principal2	17	1	56079634	2270
ENSMUSG00000009630	protein_coding	Ppp2cb	ENSMUST00000009774	protein_coding	principal1	8	1	33599625	1469
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000135381	processed_transcript		14	-1	18665150	335
ENSMUSG00000032939	protein_coding	Nup93	ENSMUST00000212062	retained_intron		8	1	94214606	730
ENSMUSG00000000127	protein_coding	Fer	ENSMUST00000232945	protein_coding		17	1	63864015	2948
ENSMUSG00000022097	protein_coding	Sftpc	ENSMUST00000227152	retained_intron		14	-1	70522176	695
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000002911	protein_coding	alternative2	17	1	56079638	2264
ENSMUSG00000032939	protein_coding	Nup93	ENSMUST00000212167	protein_coding		8	1	94266847	504
ENSMUSG00000002111	protein_coding	Spi1	ENSMUST00000169852	protein_coding		2	1	91082390	544
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000151926	protein_coding		14	-1	18893414	666
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000225843	protein_coding	alternative2	17	1	56079699	2238
ENSMUSG00000002111	protein_coding	Spi1	ENSMUST00000131400	processed_transcript		2	1	91082408	613
ENSMUSG00000032939	protein_coding	Nup93	ENSMUST00000211822	protein_coding		8	1	94268606	2674
ENSMUSG00000045210	protein_coding	Vcpip1	ENSMUST00000057438	protein_coding	principal1	1	-1	9748382	9749
ENSMUSG00000038421	protein_coding	Fcrla	ENSMUST00000046322	protein_coding	principal4	1	-1	170927583	1679
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000170644	retained_intron		17	-1	34028046	1293
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000176931	retained_intron		14	-1	18893718	772
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000224078	processed_transcript		17	1	56079893	426
ENSMUSG00000106985	lincRNA	Gm42761	ENSMUST00000201899	lincRNA		5	1	77485727	738
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000177259	processed_transcript		14	-1	18893645	423
ENSMUSG00000038421	protein_coding	Fcrla	ENSMUST00000159149	nonsense_mediated_decay		1	-1	170922399	1116
ENSMUSG00000032939	protein_coding	Nup93	ENSMUST00000212984	processed_transcript		8	1	94296007	623
ENSMUSG00000021018	protein_coding	Polr2h	ENSMUST00000021405	protein_coding	principal1	16	1	20717665	950
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000124353	protein_coding		14	-1	18894267	445
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000177398	processed_transcript		14	-1	18893645	514
ENSMUSG00000018848	protein_coding	Rars	ENSMUST00000018992	protein_coding	principal1	11	-1	35834506	2109
ENSMUSG00000032939	protein_coding	Nup93	ENSMUST00000109547	protein_coding	principal1	8	1	94227661	2847
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000173425	retained_intron		17	-1	34027511	709
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000176062	processed_transcript		14	-1	18893693	647
ENSMUSG00000029992	protein_coding	Gfpt1	ENSMUST00000113658	protein_coding	principal1	6	1	87042846	6238
ENSMUSG00000073542	protein_coding	Cep76	ENSMUST00000097542	protein_coding	principal1	18	-1	67641336	3576
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000174029	retained_intron		17	-1	34026952	459
ENSMUSG00000052906	protein_coding	Ubxn8	ENSMUST00000095349	protein_coding	principal1	8	-1	33641967	2808
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000235579	retained_intron		17	-1	34027727	745
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000144873	retained_intron		14	-1	18893279	2135
ENSMUSG00000022097	protein_coding	Sftpc	ENSMUST00000022692	protein_coding	principal1	14	-1	70524081	792
ENSMUSG00000058317	protein_coding	Ube2e2	ENSMUST00000076133	protein_coding	principal1	14	-1	18888441	606
ENSMUSG00000018848	protein_coding	Rars	ENSMUST00000143205	processed_transcript		11	-1	35820109	602
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000174399	protein_coding		17	-1	34027863	728
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000225342	retained_intron		17	1	56081424	3354
ENSMUSG00000029992	protein_coding	Gfpt1	ENSMUST00000204872	retained_intron		6	1	87042850	2809
ENSMUSG00000083606	processed_pseudogene	Gm15916	ENSMUST00000118355	processed_pseudogene		14	1	18831296	736
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000224172	retained_intron		17	1	56093702	241
ENSMUSG00000021018	protein_coding	Polr2h	ENSMUST00000231656	protein_coding		16	1	20717830	689
ENSMUSG00000018848	protein_coding	Rars	ENSMUST00000165817	retained_intron		11	-1	35821503	614
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000224655	retained_intron		17	1	56096858	679
ENSMUSG00000052906	protein_coding	Ubxn8	ENSMUST00000210807	processed_transcript		8	-1	33636254	497
ENSMUSG00000038421	protein_coding	Fcrla	ENSMUST00000159171	protein_coding	alternative2	1	-1	170927583	1371
ENSMUSG00000029992	protein_coding	Gfpt1	ENSMUST00000150410	processed_transcript		6	1	87042850	473
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000226035	retained_intron		17	1	56098217	715
ENSMUSG00000018848	protein_coding	Rars	ENSMUST00000166122	retained_intron		11	-1	35825133	827
ENSMUSG00000018293	protein_coding	Pfn1	ENSMUST00000018437	protein_coding	principal1	11	-1	70654644	861
ENSMUSG00000021018	protein_coding	Polr2h	ENSMUST00000231392	protein_coding		16	1	20718106	678
ENSMUSG00000080898	processed_pseudogene	Gm14836	ENSMUST00000118567	processed_pseudogene		X	1	107233330	471
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000114303	protein_coding		17	-1	34028060	716
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000224101	retained_intron		17	1	56098739	594
ENSMUSG00000021018	protein_coding	Polr2h	ENSMUST00000161038	protein_coding		16	1	20718172	858
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000225208	retained_intron		17	1	56098981	661
ENSMUSG00000091526	lincRNA	BB019430	ENSMUST00000218015	lincRNA		10	1	58696745	1320
ENSMUSG00000018848	protein_coding	Rars	ENSMUST00000137815	processed_transcript		11	-1	35834461	634
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000224701	retained_intron		17	1	56099511	576
ENSMUSG00000091526	lincRNA	BB019430	ENSMUST00000167536	lincRNA		10	1	58703995	285
ENSMUSG00000038421	protein_coding	Fcrla	ENSMUST00000162136	protein_coding		1	-1	170927555	663
ENSMUSG00000029992	protein_coding	Gfpt1	ENSMUST00000113655	protein_coding		6	1	87042850	1255
ENSMUSG00000073542	protein_coding	Cep76	ENSMUST00000236857	processed_transcript		18	-1	67638913	3354
ENSMUSG00000112424	processed_pseudogene	Gm6494	ENSMUST00000218604	processed_pseudogene		10	1	58757270	2298
ENSMUSG00000018293	protein_coding	Pfn1	ENSMUST00000178254	nonsense_mediated_decay		11	-1	70654621	724
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000173894	retained_intron		17	-1	34028038	753
ENSMUSG00000002833	protein_coding	Hdgfl2	ENSMUST00000225731	retained_intron		17	1	56099562	687
ENSMUSG00000073422	protein_coding	H2-Ke6	ENSMUST00000236164	retained_intron		17	-1	34028046	731
ENSMUSG00000018293	protein_coding	Pfn1	ENSMUST00000177669	retained_intron		11	-1	70654608	1997
ENSMUSG00000073542	protein_coding	Cep76	ENSMUST00000237975	processed_transcript		18	-1	67638989	323
ENSMUSG00000029992	protein_coding	Gfpt1	ENSMUST00000032057	protein_coding		6	1	87042891	2286
ENSMUSG00000018293	protein_coding	Pfn1	ENSMUST00000108549	protein_coding		11	-1	70654598	608
ENSMUSG00000029992	protein_coding	Gfpt1	ENSMUST00000146410	retained_intron		6	1	87076808	729
ENSMUSG00000038421	protein_coding	Fcrla	ENSMUST00000162887	protein_coding		1	-1	170927560	509
ENSMUSG00000038421	protein_coding	Fcrla	ENSMUST00000161050	processed_transcript		1	-1	170927534	460
ENSMUSG00000089838	processed_pseudogene	Gm2962	ENSMUST00000159266	processed_pseudogene		1	-1	170925644	336
ENSMUSG00000040746	protein_coding	Rnf167	ENSMUST00000141537	processed_transcript		11	1	70647235	383
ENSMUSG00000039270	protein_coding	Megf9	ENSMUST00000037881	nonsense_mediated_decay		4	-1	70534995	1205
ENSMUSG00000094562	TR_V_gene	Trav13-4-dv7	ENSMUST00000180380	TR_V_gene		14	1	53757356	385
ENSMUSG00000005677	protein_coding	Nr1i3	ENSMUST00000005820	protein_coding	principal3	1	1	171213970	1414
ENSMUSG00000094562	TR_V_gene	Trav13-4-dv7	ENSMUST00000184905	TR_V_gene	principal1	14	1	53757651	264
ENSMUSG00000100282	lincRNA	1700041C23Rik	ENSMUST00000185243	lincRNA		9	1	57175275	395
ENSMUSG00000050732	protein_coding	Vamp8	ENSMUST00000059983	protein_coding	principal1	6	-1	72390703	820
ENSMUSG00000005677	protein_coding	Nr1i3	ENSMUST00000075469	protein_coding		1	1	171213971	1305
ENSMUSG00000094690	protein_coding	1600014C23Rik	ENSMUST00000233108	lincRNA		17	-1	45733844	518
ENSMUSG00000031696	protein_coding	Vps35	ENSMUST00000034131	protein_coding	principal1	8	-1	85299802	3474
ENSMUSG00000094690	protein_coding	1600014C23Rik	ENSMUST00000178179	protein_coding	principal1	17	-1	45733844	518
ENSMUSG00000005677	protein_coding	Nr1i3	ENSMUST00000155126	protein_coding		1	1	171213986	2980
ENSMUSG00000050732	protein_coding	Vamp8	ENSMUST00000142613	protein_coding		6	-1	72389911	2076
ENSMUSG00000002831	protein_coding	Plin4	ENSMUST00000238734	protein_coding	alternative2	17	-1	56109803	6350
ENSMUSG00000002831	protein_coding	Plin4	ENSMUST00000190703	protein_coding	principal2	17	-1	56109803	5756
ENSMUSG00000031696	protein_coding	Vps35	ENSMUST00000209277	retained_intron		8	-1	85274503	5002
ENSMUSG00000094212	TR_V_gene	Trav14-3	ENSMUST00000103589	TR_V_gene	principal1	14	1	53763173	384
ENSMUSG00000050821	protein_coding	Fam131a	ENSMUST00000149543	protein_coding		16	1	20693241	368
ENSMUSG00000105090	TR_V_pseudogene	Trav15-3	ENSMUST00000199403	TR_V_pseudogene		14	1	53767026	155
ENSMUSG00000051506	protein_coding	Wdfy4	ENSMUST00000130509	protein_coding	alternative2	14	-1	33185066	10158
ENSMUSG00000031696	protein_coding	Vps35	ENSMUST00000209228	processed_transcript		8	-1	85299469	308
ENSMUSG00000046826	protein_coding	Fam187b	ENSMUST00000206754	retained_intron		7	1	30973790	2521
ENSMUSG00000051506	protein_coding	Wdfy4	ENSMUST00000132153	protein_coding		14	-1	33023337	437
ENSMUSG00000031696	protein_coding	Vps35	ENSMUST00000211479	retained_intron		8	-1	85299466	473
ENSMUSG00000002831	protein_coding	Plin4	ENSMUST00000002908	protein_coding	alternative2	17	-1	56109802	5755
ENSMUSG00000051506	protein_coding	Wdfy4	ENSMUST00000159606	protein_coding		14	-1	33185508	347
ENSMUSG00000031696	protein_coding	Vps35	ENSMUST00000211154	processed_transcript		8	-1	85299463	448
ENSMUSG00000039270	protein_coding	Megf9	ENSMUST00000107359	protein_coding	principal1	4	-1	70534928	7924
ENSMUSG00000002111	protein_coding	Spi1	ENSMUST00000002180	protein_coding	principal1	2	1	91096096	2034
ENSMUSG00000104158	protein_coding	Gm38100	ENSMUST00000201297	protein_coding	principal2	1	1	175920329	1789
ENSMUSG00000097727	lincRNA	F630040K05Rik	ENSMUST00000180558	lincRNA		17	1	45734506	2634
ENSMUSG00000104158	protein_coding	Gm38100	ENSMUST00000194391	protein_coding	alternative2	1	1	175920370	1329
ENSMUSG00000097727	lincRNA	F630040K05Rik	ENSMUST00000180519	lincRNA		17	1	45756710	2841
ENSMUSG00000051506	protein_coding	Wdfy4	ENSMUST00000061753	protein_coding	principal2	14	-1	33185066	9681
ENSMUSG00000101978	lincRNA	1700063O14Rik	ENSMUST00000187067	lincRNA		5	-1	91767300	492
ENSMUSG00000107968	processed_pseudogene	Gm44419	ENSMUST00000203338	processed_pseudogene		6	1	65150997	229
ENSMUSG00000046826	protein_coding	Fam187b	ENSMUST00000129773	protein_coding	alternative2	7	1	30973804	1213
ENSMUSG00000103540	TEC	Gm37668	ENSMUST00000193745	TEC		1	-1	175957398	1944
ENSMUSG00000097727	lincRNA	F630040K05Rik	ENSMUST00000233473	lincRNA		17	1	45767195	735
ENSMUSG00000083549	processed_pseudogene	Gm11227	ENSMUST00000119774	processed_pseudogene		4	1	71072673	471
ENSMUSG00000099468	lincRNA	Gm28271	ENSMUST00000191369	lincRNA		5	-1	91767914	351
ENSMUSG00000002111	protein_coding	Spi1	ENSMUST00000132741	protein_coding		2	1	91096780	402
ENSMUSG00000047889	protein_coding	Serpinb6d	ENSMUST00000059637	protein_coding	principal1	13	1	33661405	1463
ENSMUSG00000108230	processed_pseudogene	Gm3549	ENSMUST00000203873	processed_pseudogene		6	1	65169164	794
ENSMUSG00000076858	TR_V_gene	Trav3-4	ENSMUST00000103670	TR_V_gene	principal1	14	1	53776956	458
ENSMUSG00000090150	protein_coding	Acad11	ENSMUST00000120854	protein_coding		9	1	104063377	3108
ENSMUSG00000112625	processed_pseudogene	Gm2628	ENSMUST00000218019	processed_pseudogene		10	-1	76198981	426
ENSMUSG00000017264	protein_coding	Exosc10	ENSMUST00000017408	protein_coding	principal2	4	1	148558429	2790
ENSMUSG00000101493	lincRNA	2810405F17Rik	ENSMUST00000189334	lincRNA		4	-1	137388382	1117
ENSMUSG00000005677	protein_coding	Nr1i3	ENSMUST00000137298	retained_intron		1	1	171213994	1638
ENSMUSG00000047889	protein_coding	Serpinb6d	ENSMUST00000221681	protein_coding	principal1	13	1	33661475	1256
ENSMUSG00000070667	processed_pseudogene	Rpl31-ps10	ENSMUST00000116034	processed_pseudogene		4	1	137395299	378
ENSMUSG00000102268	processed_pseudogene	Gm8826	ENSMUST00000193161	processed_pseudogene		3	1	7454521	948
ENSMUSG00000106073	TEC	Gm42892	ENSMUST00000196227	TEC		3	-1	116944330	3973
ENSMUSG00000005677	protein_coding	Nr1i3	ENSMUST00000133075	nonsense_mediated_decay		1	1	171214002	1446
ENSMUSG00000118018	lincRNA	AC156546.1	ENSMUST00000235649	lincRNA		18	-1	43529880	3704
ENSMUSG00000038599	protein_coding	Capn8	ENSMUST00000048941	protein_coding	principal1	1	1	182565012	2406
ENSMUSG00000082986	unprocessed_pseudogene	Gm11389	ENSMUST00000121407	unprocessed_pseudogene		13	1	33686457	430
ENSMUSG00000046826	protein_coding	Fam187b	ENSMUST00000058093	protein_coding	principal2	7	1	30977043	1485
ENSMUSG00000097202	unprocessed_pseudogene	Gm26701	ENSMUST00000181571	unprocessed_pseudogene		13	-1	33701102	234
ENSMUSG00000005677	protein_coding	Nr1i3	ENSMUST00000111328	protein_coding	alternative2	1	1	171214021	1359
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000004673	protein_coding		14	-1	51913430	2099
ENSMUSG00000005677	protein_coding	Nr1i3	ENSMUST00000152865	retained_intron		1	1	171214021	2855
ENSMUSG00000038599	protein_coding	Capn8	ENSMUST00000192671	nonsense_mediated_decay		1	1	182565038	2333
ENSMUSG00000030751	protein_coding	Psma1	ENSMUST00000033008	protein_coding	principal1	7	-1	114276118	1201
ENSMUSG00000097931	unprocessed_pseudogene	Gm11392	ENSMUST00000181419	unprocessed_pseudogene		13	1	33718276	710
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000139997	retained_intron		11	-1	101302252	3476
ENSMUSG00000005677	protein_coding	Nr1i3	ENSMUST00000149404	retained_intron		1	1	171214349	1272
ENSMUSG00000046826	protein_coding	Fam187b	ENSMUST00000128384	protein_coding	alternative2	7	1	30981870	1244
ENSMUSG00000090150	protein_coding	Acad11	ENSMUST00000047799	protein_coding	principal1	9	1	104063686	3444
ENSMUSG00000048109	protein_coding	Rbm15	ENSMUST00000061772	protein_coding	principal1	3	-1	107333673	4343
ENSMUSG00000038599	protein_coding	Capn8	ENSMUST00000168514	protein_coding		1	1	182565007	2483
ENSMUSG00000090150	protein_coding	Acad11	ENSMUST00000185819	retained_intron		9	1	104063722	1949
ENSMUSG00000060030	protein_coding	Olfr317	ENSMUST00000215513	protein_coding	principal1	11	-1	58739113	2769
ENSMUSG00000040746	protein_coding	Rnf167	ENSMUST00000141695	nonsense_mediated_decay		11	1	70647287	1957
ENSMUSG00000030751	protein_coding	Psma1	ENSMUST00000135570	protein_coding		7	-1	114276026	960
ENSMUSG00000090150	protein_coding	Acad11	ENSMUST00000189998	protein_coding		9	1	104063733	2030
ENSMUSG00000048109	protein_coding	Rbm15	ENSMUST00000197769	retained_intron		3	-1	107333101	5967
ENSMUSG00000060030	protein_coding	Olfr317	ENSMUST00000216196	protein_coding	principal1	11	-1	58739212	2781
ENSMUSG00000078681	protein_coding	Tm2d3	ENSMUST00000065574	protein_coding	principal2	7	1	65691169	1478
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000111632	protein_coding	principal1	14	-1	51913488	2103
ENSMUSG00000105380	TR_V_pseudogene	Trav12-4	ENSMUST00000200663	TR_V_pseudogene		14	1	53778603	271
ENSMUSG00000067745	lincRNA	Gm14243	ENSMUST00000131401	lincRNA		2	1	161179064	2172
ENSMUSG00000090150	protein_coding	Acad11	ENSMUST00000154431	processed_transcript		9	1	104091055	598
ENSMUSG00000085469	lincRNA	Gm14242	ENSMUST00000145204	lincRNA		2	-1	161207280	375
ENSMUSG00000030751	protein_coding	Psma1	ENSMUST00000154909	retained_intron		7	-1	114276054	959
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000212140	protein_coding		8	-1	70783488	3047
ENSMUSG00000090150	protein_coding	Acad11	ENSMUST00000189133	retained_intron		9	1	104110370	3463
ENSMUSG00000117139	lincRNA	Gm35692	ENSMUST00000233237	lincRNA		17	-1	45822323	1323
ENSMUSG00000060030	protein_coding	Olfr317	ENSMUST00000075607	protein_coding	principal1	11	-1	58733223	1128
ENSMUSG00000090150	protein_coding	Acad11	ENSMUST00000216220	retained_intron		9	1	104122750	495
ENSMUSG00000081099	processed_pseudogene	Gm5270	ENSMUST00000121506	processed_pseudogene		2	-1	161255457	1002
ENSMUSG00000030751	protein_coding	Psma1	ENSMUST00000123801	retained_intron		7	-1	114276043	591
ENSMUSG00000030751	protein_coding	Psma1	ENSMUST00000210966	retained_intron		7	-1	114276067	956
ENSMUSG00000090150	protein_coding	Acad11	ENSMUST00000128714	processed_transcript		9	1	104123839	614
ENSMUSG00000104268	TEC	Gm37750	ENSMUST00000193563	TEC		9	1	104053327	129
ENSMUSG00000087666	TR_V_gene	Trav13-5	ENSMUST00000103671	TR_V_gene	principal1	14	1	53795357	426
ENSMUSG00000111218	TEC	Gm46999	ENSMUST00000216305	TEC		9	1	104104436	365
ENSMUSG00000107677	protein_coding	Olfr316	ENSMUST00000215071	protein_coding	principal1	11	1	58752734	2719
ENSMUSG00000103062	TEC	Gm37200	ENSMUST00000193689	TEC		9	-1	104045776	2172
ENSMUSG00000078520	protein_coding	Cela3a	ENSMUST00000024200	protein_coding	principal1	4	-1	137409791	958
ENSMUSG00000026749	protein_coding	Nek6	ENSMUST00000054234	protein_coding	principal1	2	1	38511643	10338
ENSMUSG00000117085	lincRNA	4930542M03Rik	ENSMUST00000233801	lincRNA		17	-1	45881452	615
ENSMUSG00000107677	protein_coding	Olfr316	ENSMUST00000203731	protein_coding	principal1	11	1	58757604	1011
ENSMUSG00000004383	protein_coding	Large1	ENSMUST00000119826	protein_coding	principal1	8	-1	73353540	4647
ENSMUSG00000116180	bidirectional_promoter_lncRNA	Gm49492	ENSMUST00000229665	bidirectional_promoter_lncRNA		15	1	100600204	2563
ENSMUSG00000078681	protein_coding	Tm2d3	ENSMUST00000032726	protein_coding		7	1	65693408	908
ENSMUSG00000050821	protein_coding	Fam131a	ENSMUST00000232207	protein_coding		16	1	20693251	962
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000122817	retained_intron		11	-1	101302260	2662
ENSMUSG00000004383	protein_coding	Large1	ENSMUST00000212459	protein_coding	principal1	8	-1	73353540	4746
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000053286	protein_coding	principal1	9	-1	44418569	1725
ENSMUSG00000096397	TR_V_gene	Trav17	ENSMUST00000103672	TR_V_gene	principal5	14	1	53806639	341
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000226698	processed_transcript		14	-1	51910206	508
ENSMUSG00000116164	lincRNA	1110013H19Rik	ENSMUST00000230712	lincRNA		15	-1	100613843	671
ENSMUSG00000050821	protein_coding	Fam131a	ENSMUST00000118919	protein_coding	alternative1	16	1	20693280	2270
ENSMUSG00000096397	TR_V_gene	Trav17	ENSMUST00000186545	TR_V_gene	alternative2	14	1	53806639	338
ENSMUSG00000004383	protein_coding	Large1	ENSMUST00000146249	retained_intron		8	-1	73098913	3486
ENSMUSG00000026749	protein_coding	Nek6	ENSMUST00000112902	protein_coding		2	1	38511668	3147
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000227237	protein_coding		14	-1	51914158	1060
ENSMUSG00000097093	bidirectional_promoter_lncRNA	C330013E15Rik	ENSMUST00000181034	bidirectional_promoter_lncRNA		15	-1	100615110	881
ENSMUSG00000076861	TR_V_gene	Trav18	ENSMUST00000103673	TR_V_gene	principal5	14	1	53831105	328
ENSMUSG00000020758	protein_coding	Itgb4	ENSMUST00000021107	protein_coding	principal2	11	1	115974709	6014
ENSMUSG00000004383	protein_coding	Large1	ENSMUST00000004497	protein_coding	principal1	8	-1	73352556	3669
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000226122	retained_intron		14	-1	51908941	384
ENSMUSG00000076861	TR_V_gene	Trav18	ENSMUST00000186573	TR_V_gene	alternative2	14	1	53831105	325
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000041403	nonsense_mediated_decay		11	-1	101302286	2123
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000227402	protein_coding		14	-1	51914097	896
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000172233	protein_coding		11	-1	101302251	1493
ENSMUSG00000106417	processed_pseudogene	Gm42628	ENSMUST00000198498	processed_pseudogene		3	1	129285269	764
ENSMUSG00000117048	lincRNA	Gm41584	ENSMUST00000233085	lincRNA		17	1	45885346	2982
ENSMUSG00000047652	transcribed_processed_pseudogene	Pea15b	ENSMUST00000182806	transcribed_processed_pseudogene		5	-1	77511564	387
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000228164	protein_coding		14	-1	51913575	635
ENSMUSG00000078681	protein_coding	Tm2d3	ENSMUST00000143508	protein_coding		7	1	65693447	318
ENSMUSG00000000127	protein_coding	Fer	ENSMUST00000233190	protein_coding		17	1	63878066	2913
ENSMUSG00000026749	protein_coding	Nek6	ENSMUST00000112895	protein_coding	principal1	2	1	38511814	1513
ENSMUSG00000117040	lincRNA	Gm49805	ENSMUST00000233512	lincRNA		17	1	45961859	699
ENSMUSG00000078681	protein_coding	Tm2d3	ENSMUST00000129166	protein_coding		7	1	65693467	565
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000226366	retained_intron		14	-1	51910517	427
ENSMUSG00000047652	transcribed_processed_pseudogene	Pea15b	ENSMUST00000183185	processed_transcript		5	-1	77511748	555
ENSMUSG00000024327	protein_coding	Slc39a7	ENSMUST00000025186	protein_coding	principal1	17	-1	34031620	2320
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000226528	protein_coding		14	-1	51911989	384
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000167667	nonsense_mediated_decay		11	-1	101302237	1599
ENSMUSG00000106996	unprocessed_pseudogene	Gm31049	ENSMUST00000201516	unprocessed_pseudogene		5	1	77687376	1302
ENSMUSG00000026749	protein_coding	Nek6	ENSMUST00000151683	protein_coding		2	1	38514581	363
ENSMUSG00000050821	protein_coding	Fam131a	ENSMUST00000056518	protein_coding	principal2	16	1	20694908	2432
ENSMUSG00000078681	protein_coding	Tm2d3	ENSMUST00000206934	nonsense_mediated_decay		7	1	65693476	653
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000226184	protein_coding		14	-1	51912845	602
ENSMUSG00000052920	protein_coding	Prkg1	ENSMUST00000065067	protein_coding	principal1	19	-1	31765033	6976
ENSMUSG00000026749	protein_coding	Nek6	ENSMUST00000156726	protein_coding		2	1	38514626	386
ENSMUSG00000078681	protein_coding	Tm2d3	ENSMUST00000206517	protein_coding	alternative2	7	1	65693477	905
ENSMUSG00000107535	TEC	Gm44183	ENSMUST00000203964	TEC		2	-1	38566354	1628
ENSMUSG00000052920	protein_coding	Prkg1	ENSMUST00000239061	protein_coding		19	-1	30730582	2449
ENSMUSG00000082931	processed_pseudogene	Gm13586	ENSMUST00000121784	processed_pseudogene		2	1	38622801	464
ENSMUSG00000033377	protein_coding	Palmd	ENSMUST00000040097	protein_coding	principal2	3	-1	116968987	2433
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000136535	retained_intron		11	-1	101294041	1002
ENSMUSG00000050821	protein_coding	Fam131a	ENSMUST00000128273	protein_coding		16	1	20696175	803
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000228620	retained_intron		14	-1	51913380	439
ENSMUSG00000000127	protein_coding	Fer	ENSMUST00000000129	protein_coding	principal1	17	1	63896022	2973
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000135805	processed_transcript		11	-1	101292498	239
ENSMUSG00000052920	protein_coding	Prkg1	ENSMUST00000073581	protein_coding		19	-1	31664370	2841
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000129863	protein_coding		11	-1	101301737	375
ENSMUSG00000108895	processed_pseudogene	Gm45070	ENSMUST00000208100	processed_pseudogene		7	-1	101018868	246
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000226364	retained_intron		14	-1	51913354	435
ENSMUSG00000078681	protein_coding	Tm2d3	ENSMUST00000206837	protein_coding		7	1	65693481	252
ENSMUSG00000033377	protein_coding	Palmd	ENSMUST00000119557	protein_coding	alternative2	3	-1	116968858	3305
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000215402	retained_intron		9	-1	44411230	877
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000126195	nonsense_mediated_decay		11	-1	101296307	786
ENSMUSG00000073008	protein_coding	Gpr174	ENSMUST00000101294	protein_coding	principal1	X	1	107255878	4614
ENSMUSG00000109171	processed_pseudogene	Gm5735	ENSMUST00000207053	processed_pseudogene		7	-1	101061475	167
ENSMUSG00000004558	protein_coding	Ndrg2	ENSMUST00000228173	retained_intron		14	-1	51913358	481
ENSMUSG00000078681	protein_coding	Tm2d3	ENSMUST00000206628	protein_coding		7	1	65693524	461
ENSMUSG00000033377	protein_coding	Palmd	ENSMUST00000143611	protein_coding		3	-1	116968986	435
ENSMUSG00000052920	protein_coding	Prkg1	ENSMUST00000183135	processed_transcript		19	-1	30574155	542
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000167818	nonsense_mediated_decay		11	-1	101302238	899
ENSMUSG00000000346	protein_coding	Dazap2	ENSMUST00000000356	protein_coding	principal1	15	1	100615349	2135
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000140286	retained_intron		11	-1	101295436	487
ENSMUSG00000033377	protein_coding	Palmd	ENSMUST00000197659	retained_intron		3	-1	116968743	3709
ENSMUSG00000078681	protein_coding	Tm2d3	ENSMUST00000206361	protein_coding		7	1	65693524	436
ENSMUSG00000052920	protein_coding	Prkg1	ENSMUST00000182459	protein_coding		19	-1	30574155	479
ENSMUSG00000096757	protein_coding	Olfr251	ENSMUST00000214865	protein_coding	alternative2	9	1	38377086	4930
ENSMUSG00000067599	protein_coding	Klra7	ENSMUST00000049304	protein_coding	principal3	6	-1	130231687	1075
ENSMUSG00000052920	protein_coding	Prkg1	ENSMUST00000182527	processed_transcript		19	-1	30625491	978
ENSMUSG00000080907	protein_coding	4930455H04Rik	ENSMUST00000117592	protein_coding	principal1	3	1	116968267	1341
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000140706	protein_coding		11	-1	101302206	684
ENSMUSG00000096757	protein_coding	Olfr251	ENSMUST00000072731	protein_coding	principal2	9	1	38377883	951
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000170502	protein_coding		11	-1	101302249	725
ENSMUSG00000041673	protein_coding	Lrrc18	ENSMUST00000038956	protein_coding	principal3	14	1	32991382	2587
ENSMUSG00000049152	protein_coding	Ugt3a2	ENSMUST00000072403	protein_coding	principal1	15	1	9335550	2329
ENSMUSG00000105221	processed_pseudogene	Gm9332	ENSMUST00000198431	processed_pseudogene		3	-1	116999586	730
ENSMUSG00000078681	protein_coding	Tm2d3	ENSMUST00000107495	protein_coding	principal2	7	1	65693417	1003
ENSMUSG00000067599	protein_coding	Klra7	ENSMUST00000088011	protein_coding	principal3	6	-1	130231638	921
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000164036	retained_intron		11	-1	101302240	329
ENSMUSG00000052920	protein_coding	Prkg1	ENSMUST00000182401	retained_intron		19	-1	30781452	1455
ENSMUSG00000073008	protein_coding	Gpr174	ENSMUST00000118820	protein_coding	principal1	X	1	107255971	5112
ENSMUSG00000024327	protein_coding	Slc39a7	ENSMUST00000170491	retained_intron		17	-1	34031648	2433
ENSMUSG00000052920	protein_coding	Prkg1	ENSMUST00000182685	processed_transcript		19	-1	31764973	1628
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000139669	processed_transcript		11	-1	101302255	463
ENSMUSG00000000346	protein_coding	Dazap2	ENSMUST00000230661	processed_transcript		15	1	100615934	751
ENSMUSG00000000127	protein_coding	Fer	ENSMUST00000038080	protein_coding		17	1	63937972	2068
ENSMUSG00000049152	protein_coding	Ugt3a2	ENSMUST00000144755	retained_intron		15	1	9335589	1722
ENSMUSG00000118011	processed_pseudogene	Gm50266	ENSMUST00000235353	processed_pseudogene		19	1	31112546	550
ENSMUSG00000040746	protein_coding	Rnf167	ENSMUST00000037534	protein_coding	principal1	11	1	70647287	1833
ENSMUSG00000000346	protein_coding	Dazap2	ENSMUST00000229424	processed_transcript		15	1	100616105	542
ENSMUSG00000035086	protein_coding	Becn1	ENSMUST00000137614	retained_intron		11	-1	101302241	506
ENSMUSG00000073008	protein_coding	Gpr174	ENSMUST00000120971	protein_coding	principal1	X	1	107256028	3588
ENSMUSG00000000346	protein_coding	Dazap2	ENSMUST00000230384	processed_transcript		15	1	100616332	440
ENSMUSG00000053536	protein_coding	Cstf2t	ENSMUST00000066039	protein_coding	principal1	19	1	31082837	4233
ENSMUSG00000073008	protein_coding	Gpr174	ENSMUST00000117310	protein_coding	principal1	X	1	107256378	3536
ENSMUSG00000078653	protein_coding	Cntd1	ENSMUST00000128735	processed_transcript		11	1	101279012	804
ENSMUSG00000104520	lincRNA	Gm37336	ENSMUST00000192794	lincRNA		1	-1	180212336	760
ENSMUSG00000048503	protein_coding	Tlcd5	ENSMUST00000061833	protein_coding	principal1	9	-1	43116570	3503
ENSMUSG00000030515	protein_coding	Tarsl2	ENSMUST00000126941	retained_intron		7	1	65644898	2709
ENSMUSG00000041673	protein_coding	Lrrc18	ENSMUST00000120866	protein_coding	alternative2	14	1	32991398	1231
ENSMUSG00000104520	lincRNA	Gm37336	ENSMUST00000193705	lincRNA		1	-1	180212401	468
ENSMUSG00000040746	protein_coding	Rnf167	ENSMUST00000152160	nonsense_mediated_decay		11	1	70647555	798
ENSMUSG00000073008	protein_coding	Gpr174	ENSMUST00000138031	processed_transcript		X	1	107268884	455
ENSMUSG00000024327	protein_coding	Slc39a7	ENSMUST00000169397	protein_coding	principal1	17	-1	34031662	1550
ENSMUSG00000084937	lincRNA	Gm11228	ENSMUST00000143796	lincRNA		4	-1	71131133	2013
ENSMUSG00000048503	protein_coding	Tlcd5	ENSMUST00000213648	processed_transcript		9	-1	43116533	736
ENSMUSG00000073008	protein_coding	Gpr174	ENSMUST00000156709	processed_transcript		X	1	107284346	639
ENSMUSG00000040746	protein_coding	Rnf167	ENSMUST00000152276	retained_intron		11	1	70647561	1802
ENSMUSG00000048503	protein_coding	Tlcd5	ENSMUST00000213544	protein_coding	principal1	9	-1	43116544	2463
ENSMUSG00000082017	processed_pseudogene	Gm11229	ENSMUST00000121993	processed_pseudogene		4	1	71285942	437
ENSMUSG00000041673	protein_coding	Lrrc18	ENSMUST00000120588	protein_coding		14	1	32991403	585
ENSMUSG00000078184	protein_coding	Rbm8a2	ENSMUST00000104983	protein_coding	principal1	1	-1	175979114	1338
ENSMUSG00000040746	protein_coding	Rnf167	ENSMUST00000131071	retained_intron		11	1	70647569	610
ENSMUSG00000073008	protein_coding	Gpr174	ENSMUST00000178838	protein_coding	principal1	X	1	107284346	4955
ENSMUSG00000049694	protein_coding	BC048671	ENSMUST00000054799	protein_coding	principal1	6	1	90301219	1212
ENSMUSG00000083914	processed_pseudogene	Rps18-ps1	ENSMUST00000120838	processed_pseudogene		4	-1	71371196	459
ENSMUSG00000041673	protein_coding	Lrrc18	ENSMUST00000123822	protein_coding		14	1	32991446	759
ENSMUSG00000103277	TEC	Gm37916	ENSMUST00000192153	TEC		1	1	176179201	2435
ENSMUSG00000048503	protein_coding	Tlcd5	ENSMUST00000216126	protein_coding		9	-1	43116536	689
ENSMUSG00000024327	protein_coding	Slc39a7	ENSMUST00000167145	retained_intron		17	-1	34031028	844
ENSMUSG00000040746	protein_coding	Rnf167	ENSMUST00000141237	retained_intron		11	1	70647943	2250
ENSMUSG00000015289	protein_coding	Lage3	ENSMUST00000114153	protein_coding		X	-1	74353594	1997
ENSMUSG00000080939	processed_pseudogene	Gm9208	ENSMUST00000120468	processed_pseudogene		X	-1	107279962	948
ENSMUSG00000024327	protein_coding	Slc39a7	ENSMUST00000173810	processed_transcript		17	-1	34031682	277
ENSMUSG00000024327	protein_coding	Slc39a7	ENSMUST00000171872	protein_coding		17	-1	34031500	620
ENSMUSG00000041673	protein_coding	Lrrc18	ENSMUST00000120951	protein_coding	alternative2	14	1	32991458	1511
ENSMUSG00000020758	protein_coding	Itgb4	ENSMUST00000068981	protein_coding	alternative2	11	1	115977786	5584
ENSMUSG00000107490	processed_pseudogene	Gm44058	ENSMUST00000204335	processed_pseudogene		6	-1	65214972	467
ENSMUSG00000049694	protein_coding	BC048671	ENSMUST00000167550	protein_coding	principal1	6	1	90302116	890
ENSMUSG00000067599	protein_coding	Klra7	ENSMUST00000032286	protein_coding	alternative2	6	-1	130233322	1042
ENSMUSG00000117572	processed_pseudogene	Gm9410	ENSMUST00000234080	processed_pseudogene		17	1	91106255	1042
ENSMUSG00000040746	protein_coding	Rnf167	ENSMUST00000151034	retained_intron		11	1	70648075	937
ENSMUSG00000041673	protein_coding	Lrrc18	ENSMUST00000123910	processed_transcript		14	1	32995265	248
ENSMUSG00000076862	TR_V_gene	Trav19	ENSMUST00000103674	TR_V_gene	principal1	14	1	53845234	446
ENSMUSG00000082432	processed_pseudogene	Gm11231	ENSMUST00000117895	processed_pseudogene		4	1	71678013	1706
ENSMUSG00000040746	protein_coding	Rnf167	ENSMUST00000143313	retained_intron		11	1	70649122	313
ENSMUSG00000106960	processed_pseudogene	Gm42673	ENSMUST00000202676	processed_pseudogene		5	-1	77909460	337
ENSMUSG00000105532	processed_pseudogene	Gm5279	ENSMUST00000199575	processed_pseudogene		3	1	107342955	745
ENSMUSG00000020758	protein_coding	Itgb4	ENSMUST00000106460	protein_coding	alternative2	11	1	115974979	5919
ENSMUSG00000108252	processed_pseudogene	Gm44059	ENSMUST00000204048	processed_pseudogene		6	-1	65233062	351
ENSMUSG00000095907	processed_pseudogene	Gm14333	ENSMUST00000130484	processed_pseudogene		X	-1	3231958	264
ENSMUSG00000040746	protein_coding	Rnf167	ENSMUST00000152458	retained_intron		11	1	70649936	291
ENSMUSG00000104386	processed_pseudogene	Gm37030	ENSMUST00000194254	processed_pseudogene		1	1	170935771	295
ENSMUSG00000080876	processed_pseudogene	Gm14332	ENSMUST00000121982	processed_pseudogene		X	-1	3278543	899
ENSMUSG00000020758	protein_coding	Itgb4	ENSMUST00000106458	protein_coding	alternative2	11	1	115977786	5779
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000214370	retained_intron		9	-1	44413111	651
ENSMUSG00000086858	TR_V_pseudogene	Trav20	ENSMUST00000142754	TR_V_pseudogene		14	1	53863110	347
ENSMUSG00000078653	protein_coding	Cntd1	ENSMUST00000103107	protein_coding	principal1	11	1	101279096	2335
ENSMUSG00000066141	protein_coding	Gm11232	ENSMUST00000084489	protein_coding	principal1	4	-1	71757965	1680
ENSMUSG00000055214	protein_coding	Pld5	ENSMUST00000125404	nonsense_mediated_decay		1	-1	176275312	3283
ENSMUSG00000067599	protein_coding	Klra7	ENSMUST00000112013	protein_coding	alternative2	6	-1	130231677	1104
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000213098	protein_coding		4	1	85514172	646
ENSMUSG00000092595	processed_transcript	Gm20427	ENSMUST00000168978	retained_intron		17	-1	34031580	3711
ENSMUSG00000078653	protein_coding	Cntd1	ENSMUST00000153438	processed_transcript		11	1	101286055	2120
ENSMUSG00000092595	processed_transcript	Gm20427	ENSMUST00000237448	retained_intron		17	-1	34029552	695
ENSMUSG00000076863	TR_V_gene	Trav21-dv12	ENSMUST00000180938	TR_V_gene	principal1	14	1	53875984	360
ENSMUSG00000107609	processed_pseudogene	Gm20177	ENSMUST00000203705	processed_pseudogene		6	1	65247273	334
ENSMUSG00000015289	protein_coding	Lage3	ENSMUST00000015433	protein_coding	principal1	X	-1	74353618	761
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000147066	processed_transcript		4	1	85514327	1742
ENSMUSG00000081117	processed_pseudogene	Gm11233	ENSMUST00000122357	processed_pseudogene		4	1	71867988	634
ENSMUSG00000076864	TR_V_gene	Trdv1	ENSMUST00000103676	TR_V_gene	principal5	14	1	53881612	337
ENSMUSG00000017264	protein_coding	Exosc10	ENSMUST00000173154	processed_transcript		4	1	148558431	2773
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000130474	retained_intron		4	1	86053915	459
ENSMUSG00000076864	TR_V_gene	Trdv1	ENSMUST00000187163	TR_V_gene	alternative2	14	1	53881612	334
ENSMUSG00000086999	antisense	Bcas1os2	ENSMUST00000131931	antisense		2	1	170356361	1174
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000216134	retained_intron		9	-1	44413298	662
ENSMUSG00000017188	protein_coding	Coa3	ENSMUST00000017332	protein_coding	principal1	11	-1	101279114	886
ENSMUSG00000086696	lincRNA	Gm11234	ENSMUST00000141030	lincRNA		4	1	71980477	845
ENSMUSG00000072721	transcribed_unprocessed_pseudogene	Klra14-ps	ENSMUST00000203601	processed_transcript		6	-1	130162569	1104
ENSMUSG00000017264	protein_coding	Exosc10	ENSMUST00000097781	nonsense_mediated_decay		4	1	148558455	2816
ENSMUSG00000015289	protein_coding	Lage3	ENSMUST00000114152	protein_coding		X	-1	74353575	746
ENSMUSG00000108097	processed_pseudogene	Gm44060	ENSMUST00000204440	processed_pseudogene		6	-1	65271910	410
ENSMUSG00000072721	transcribed_unprocessed_pseudogene	Klra14-ps	ENSMUST00000119532	transcribed_unprocessed_pseudogene		6	-1	130160748	802
ENSMUSG00000087547	lincRNA	Platr27	ENSMUST00000131365	lincRNA		2	-1	157597320	629
ENSMUSG00000035247	protein_coding	Hectd1	ENSMUST00000042052	protein_coding	principal1	12	-1	51829536	8988
ENSMUSG00000017188	protein_coding	Coa3	ENSMUST00000168089	protein_coding		11	-1	101278943	291
ENSMUSG00000017264	protein_coding	Exosc10	ENSMUST00000076022	protein_coding	alternative2	4	1	148558462	2682
ENSMUSG00000017264	protein_coding	Exosc10	ENSMUST00000150723	nonsense_mediated_decay		4	1	148563075	306
ENSMUSG00000082177	processed_pseudogene	Gm16005	ENSMUST00000120515	processed_pseudogene		17	1	27522573	272
ENSMUSG00000107630	processed_pseudogene	Gm44061	ENSMUST00000203962	processed_pseudogene		6	-1	65274144	1195
ENSMUSG00000020758	protein_coding	Itgb4	ENSMUST00000151691	processed_transcript		11	1	115974843	3786
ENSMUSG00000035247	protein_coding	Hectd1	ENSMUST00000218626	retained_intron		12	-1	51765231	2895
ENSMUSG00000040829	protein_coding	Zmynd15	ENSMUST00000108563	protein_coding	alternative2	11	1	70459433	2649
ENSMUSG00000035247	protein_coding	Hectd1	ENSMUST00000220098	retained_intron		12	-1	51782581	2575
ENSMUSG00000017264	protein_coding	Exosc10	ENSMUST00000173767	retained_intron		4	1	148566357	1188
ENSMUSG00000086462	antisense	Gm13990	ENSMUST00000151391	antisense		2	-1	116877168	2701
ENSMUSG00000035247	protein_coding	Hectd1	ENSMUST00000217804	retained_intron		12	-1	51829318	1447
ENSMUSG00000026750	protein_coding	Psmb7	ENSMUST00000028083	protein_coding	principal1	2	-1	38644087	1160
ENSMUSG00000020758	protein_coding	Itgb4	ENSMUST00000150129	processed_transcript		11	1	115989938	402
ENSMUSG00000112761	lincRNA	Gm47972	ENSMUST00000217897	lincRNA		10	1	126962323	428
ENSMUSG00000017264	protein_coding	Exosc10	ENSMUST00000126897	retained_intron		4	1	148568415	1195
ENSMUSG00000017264	protein_coding	Exosc10	ENSMUST00000173892	processed_transcript		4	1	148576166	401
ENSMUSG00000020758	protein_coding	Itgb4	ENSMUST00000127523	processed_transcript		11	1	115990952	375
ENSMUSG00000045519	protein_coding	Zfp560	ENSMUST00000068079	protein_coding	principal1	9	-1	20385177	4751
ENSMUSG00000082741	processed_pseudogene	Gm9703	ENSMUST00000119573	processed_pseudogene		17	1	27530067	346
ENSMUSG00000082860	processed_pseudogene	Gm13204	ENSMUST00000120110	processed_pseudogene		4	-1	148569876	821
ENSMUSG00000020758	protein_coding	Itgb4	ENSMUST00000130286	processed_transcript		11	1	115992932	521
ENSMUSG00000045519	protein_coding	Zfp560	ENSMUST00000214965	processed_transcript		9	-1	20355646	620
ENSMUSG00000032806	protein_coding	Slc10a3	ENSMUST00000114147	protein_coding	alternative2	X	-1	74371011	1708
ENSMUSG00000042647	protein_coding	Acad12	ENSMUST00000041252	protein_coding	principal1	5	-1	121618938	3881
ENSMUSG00000035247	protein_coding	Hectd1	ENSMUST00000179265	protein_coding		12	-1	51829536	9012
ENSMUSG00000107322	lincRNA	4933439J24Rik	ENSMUST00000200866	lincRNA		5	1	134919788	853
ENSMUSG00000031536	protein_coding	Polb	ENSMUST00000033938	protein_coding	principal1	8	-1	22653418	1201
ENSMUSG00000113037	antisense	Gm36550	ENSMUST00000221947	antisense		13	1	48593501	416
ENSMUSG00000045519	protein_coding	Zfp560	ENSMUST00000143992	protein_coding		9	-1	20385177	608
ENSMUSG00000053559	protein_coding	Smagp	ENSMUST00000066068	protein_coding	principal2	15	-1	100636855	1135
ENSMUSG00000118424	unprocessed_pseudogene	Gm50473	ENSMUST00000238419	unprocessed_pseudogene		5	-1	134920352	607
ENSMUSG00000026750	protein_coding	Psmb7	ENSMUST00000151981	retained_intron		2	-1	38643920	2849
ENSMUSG00000040829	protein_coding	Zmynd15	ENSMUST00000039093	protein_coding	principal2	11	1	70459622	2804
ENSMUSG00000108210	TEC	Gm35808	ENSMUST00000204769	TEC		2	-1	38535707	2602
ENSMUSG00000083144	processed_pseudogene	Gm14334	ENSMUST00000122030	processed_pseudogene		X	1	3328043	693
ENSMUSG00000042647	protein_coding	Acad12	ENSMUST00000197306	processed_transcript		5	-1	121597979	518
ENSMUSG00000053559	protein_coding	Smagp	ENSMUST00000230280	protein_coding		15	-1	100636691	880
ENSMUSG00000020758	protein_coding	Itgb4	ENSMUST00000169928	protein_coding	principal2	11	1	115974725	6160
ENSMUSG00000040829	protein_coding	Zmynd15	ENSMUST00000147289	protein_coding		11	1	70459940	362
ENSMUSG00000031536	protein_coding	Polb	ENSMUST00000210950	nonsense_mediated_decay		8	-1	22653435	3354
ENSMUSG00000042647	protein_coding	Acad12	ENSMUST00000131338	protein_coding		5	-1	121605629	1924
ENSMUSG00000020758	protein_coding	Itgb4	ENSMUST00000106461	protein_coding	alternative2	11	1	115974725	6208
ENSMUSG00000040829	protein_coding	Zmynd15	ENSMUST00000126105	protein_coding		11	1	70460137	531
ENSMUSG00000042647	protein_coding	Acad12	ENSMUST00000111776	protein_coding		5	-1	121618938	2269
ENSMUSG00000087278	lincRNA	A930006I01Rik	ENSMUST00000139065	lincRNA		2	-1	103372764	2229
ENSMUSG00000042647	protein_coding	Acad12	ENSMUST00000197916	nonsense_mediated_decay		5	-1	121618863	530
ENSMUSG00000102686	TEC	Gm37220	ENSMUST00000195179	TEC		2	-1	103364738	415
ENSMUSG00000053559	protein_coding	Smagp	ENSMUST00000172334	protein_coding	principal2	15	-1	100636940	920
ENSMUSG00000118469	unprocessed_pseudogene	Gm50474	ENSMUST00000238432	unprocessed_pseudogene		5	-1	134924873	613
ENSMUSG00000027895	protein_coding	Kcnc4	ENSMUST00000009617	protein_coding	principal2	3	-1	107459552	3667
ENSMUSG00000107005	TEC	9030607J07Rik	ENSMUST00000202228	TEC		5	-1	134931469	1622
ENSMUSG00000100627	lincRNA	A830008E24Rik	ENSMUST00000185465	lincRNA		1	-1	154116153	545
ENSMUSG00000040829	protein_coding	Zmynd15	ENSMUST00000136029	retained_intron		11	1	70460196	3696
ENSMUSG00000053559	protein_coding	Smagp	ENSMUST00000229965	protein_coding		15	-1	100636864	586
ENSMUSG00000027895	protein_coding	Kcnc4	ENSMUST00000238670	protein_coding	alternative2	3	-1	107459552	2664
ENSMUSG00000100627	lincRNA	A830008E24Rik	ENSMUST00000190485	lincRNA		1	-1	154117951	5226
ENSMUSG00000040829	protein_coding	Zmynd15	ENSMUST00000092958	protein_coding	alternative2	11	1	70460565	2100
ENSMUSG00000030515	protein_coding	Tarsl2	ENSMUST00000032728	protein_coding	principal1	7	1	65644898	3192
ENSMUSG00000029432	protein_coding	Nipsnap2	ENSMUST00000086046	protein_coding	principal1	5	1	129725063	2112
ENSMUSG00000030515	protein_coding	Tarsl2	ENSMUST00000206323	retained_intron		7	1	65659032	2711
ENSMUSG00000043542	protein_coding	Zc2hc1a	ENSMUST00000051064	protein_coding	principal1	3	1	7503483	3292
ENSMUSG00000031007	protein_coding	Atp6ap2	ENSMUST00000137277	retained_intron		X	1	12587801	692
ENSMUSG00000104650	TR_V_pseudogene	Trav22	ENSMUST00000198117	TR_V_pseudogene		14	1	53926978	346
ENSMUSG00000053559	protein_coding	Smagp	ENSMUST00000229307	protein_coding	alternative2	15	-1	100635500	527
ENSMUSG00000030515	protein_coding	Tarsl2	ENSMUST00000127354	processed_transcript		7	1	65678064	632
ENSMUSG00000076866	TR_V_gene	Trdv2-2	ENSMUST00000103678	TR_V_gene	principal1	14	1	53960944	397
ENSMUSG00000032806	protein_coding	Slc10a3	ENSMUST00000114146	protein_coding	principal2	X	-1	74373246	1902
ENSMUSG00000029432	protein_coding	Nipsnap2	ENSMUST00000124342	nonsense_mediated_decay		5	1	129725099	1600
ENSMUSG00000043542	protein_coding	Zc2hc1a	ENSMUST00000193010	protein_coding		3	1	7503486	1420
ENSMUSG00000053559	protein_coding	Smagp	ENSMUST00000230517	protein_coding	alternative2	15	-1	100635559	583
ENSMUSG00000074991	protein_coding	Gabrr3	ENSMUST00000114341	protein_coding	principal1	16	1	59407332	4271
ENSMUSG00000105963	antisense	Gm43647	ENSMUST00000198142	antisense		14	-1	53961515	486
ENSMUSG00000043542	protein_coding	Zc2hc1a	ENSMUST00000192835	retained_intron		3	1	7538860	443
ENSMUSG00000076865	TR_V_gene	Trdv2-1	ENSMUST00000197130	TR_V_gene	principal5	14	1	53946073	348
ENSMUSG00000032806	protein_coding	Slc10a3	ENSMUST00000073067	protein_coding	principal2	X	-1	74373305	1910
ENSMUSG00000029432	protein_coding	Nipsnap2	ENSMUST00000195946	nonsense_mediated_decay		5	1	129725101	905
ENSMUSG00000076865	TR_V_gene	Trdv2-1	ENSMUST00000103677	TR_V_gene	alternative2	14	1	53946073	345
ENSMUSG00000099983	lincRNA	1700022E09Rik	ENSMUST00000185295	lincRNA		16	-1	59469204	299
ENSMUSG00000029432	protein_coding	Nipsnap2	ENSMUST00000137604	retained_intron		5	1	129752658	871
ENSMUSG00000029432	protein_coding	Nipsnap2	ENSMUST00000135160	processed_transcript		5	1	129753230	183
ENSMUSG00000029432	protein_coding	Nipsnap2	ENSMUST00000186265	protein_coding	principal1	5	1	129725099	1600
ENSMUSG00000032806	protein_coding	Slc10a3	ENSMUST00000037967	protein_coding	principal2	X	-1	74373349	2023
ENSMUSG00000099983	lincRNA	1700022E09Rik	ENSMUST00000188342	lincRNA		16	-1	59469238	387
ENSMUSG00000018920	protein_coding	Cxcl16	ENSMUST00000019064	protein_coding	principal1	11	-1	70459984	2699
ENSMUSG00000005674	protein_coding	Tomm40l	ENSMUST00000005817	protein_coding	principal1	1	-1	171222514	4712
ENSMUSG00000086916	sense_intronic	Gm15903	ENSMUST00000155796	sense_intronic		5	1	129727046	310
ENSMUSG00000086916	sense_intronic	Gm15903	ENSMUST00000199631	sense_intronic		5	1	129728172	3518
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000214494	nonsense_mediated_decay		9	-1	44418029	1080
ENSMUSG00000064330	protein_coding	Pde6h	ENSMUST00000204627	protein_coding		6	1	136923832	392
ENSMUSG00000026880	protein_coding	Stom	ENSMUST00000028241	protein_coding	principal1	2	-1	35336976	2787
ENSMUSG00000018920	protein_coding	Cxcl16	ENSMUST00000126391	nonsense_mediated_decay		11	-1	70459408	1267
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000214702	nonsense_mediated_decay		9	-1	44418030	878
ENSMUSG00000026880	protein_coding	Stom	ENSMUST00000202568	retained_intron		2	-1	35320505	890
ENSMUSG00000018920	protein_coding	Cxcl16	ENSMUST00000154475	retained_intron		11	-1	70459832	1662
ENSMUSG00000005674	protein_coding	Tomm40l	ENSMUST00000111327	protein_coding	principal1	1	-1	171222184	2812
ENSMUSG00000086951	processed_transcript	1700051A21Rik	ENSMUST00000147937	processed_transcript		11	1	72266421	1516
ENSMUSG00000106712	TEC	Gm19649	ENSMUST00000201126	TEC		5	-1	91786882	822
ENSMUSG00000014606	protein_coding	Slc25a11	ENSMUST00000014750	protein_coding	principal1	11	-1	70647058	1711
ENSMUSG00000005674	protein_coding	Tomm40l	ENSMUST00000111326	protein_coding		1	-1	171222448	2753
ENSMUSG00000044058	processed_pseudogene	Mthfr-ps1	ENSMUST00000174153	processed_pseudogene		5	1	78473885	601
ENSMUSG00000107337	processed_pseudogene	Gm43596	ENSMUST00000202818	processed_pseudogene		5	1	91788598	884
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000215111	retained_intron		9	-1	44417986	820
ENSMUSG00000086951	processed_transcript	1700051A21Rik	ENSMUST00000154739	processed_transcript		11	1	72266844	1359
ENSMUSG00000064330	protein_coding	Pde6h	ENSMUST00000137768	protein_coding	principal1	6	1	136954523	5940
ENSMUSG00000005674	protein_coding	Tomm40l	ENSMUST00000143405	nonsense_mediated_decay		1	-1	171222451	2034
ENSMUSG00000096726	processed_pseudogene	Gm5558	ENSMUST00000178933	processed_pseudogene		5	-1	91807073	495
ENSMUSG00000020132	protein_coding	Rab21	ENSMUST00000020343	protein_coding	principal1	10	-1	115315591	4602
ENSMUSG00000064330	protein_coding	Pde6h	ENSMUST00000057650	retained_intron		6	1	136954533	2318
ENSMUSG00000014606	protein_coding	Slc25a11	ENSMUST00000134804	retained_intron		11	-1	70645910	768
ENSMUSG00000107301	lincRNA	Gm43688	ENSMUST00000202249	lincRNA		5	-1	91913403	310
ENSMUSG00000005674	protein_coding	Tomm40l	ENSMUST00000138184	protein_coding		1	-1	171222460	477
ENSMUSG00000064330	protein_coding	Pde6h	ENSMUST00000204382	protein_coding		6	1	136959261	211
ENSMUSG00000020132	protein_coding	Rab21	ENSMUST00000218831	protein_coding		10	-1	115315594	843
ENSMUSG00000005674	protein_coding	Tomm40l	ENSMUST00000147246	protein_coding		1	-1	171222444	362
ENSMUSG00000014606	protein_coding	Slc25a11	ENSMUST00000139638	protein_coding		11	-1	70647479	770
ENSMUSG00000113802	lincRNA	4933416O17Rik	ENSMUST00000220972	lincRNA		13	1	69959833	2122
ENSMUSG00000025025	protein_coding	Mxi1	ENSMUST00000003870	protein_coding		19	1	53310518	2627
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000213813	protein_coding		9	-1	44418039	2675
ENSMUSG00000014606	protein_coding	Slc25a11	ENSMUST00000157076	retained_intron		11	-1	70646978	531
ENSMUSG00000055214	protein_coding	Pld5	ENSMUST00000065967	protein_coding	principal1	1	-1	176275298	3557
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000166004	protein_coding	alternative2	8	-1	70796988	5305
ENSMUSG00000021427	protein_coding	Ssr1	ENSMUST00000225246	protein_coding		13	-1	37994157	1825
ENSMUSG00000005674	protein_coding	Tomm40l	ENSMUST00000154106	processed_transcript		1	-1	171222432	550
ENSMUSG00000021427	protein_coding	Ssr1	ENSMUST00000225319	protein_coding		13	-1	37994083	1610
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000217351	protein_coding		9	-1	44418037	888
ENSMUSG00000014606	protein_coding	Slc25a11	ENSMUST00000136383	protein_coding		11	-1	70646899	416
ENSMUSG00000005674	protein_coding	Tomm40l	ENSMUST00000130529	retained_intron		1	-1	171222496	832
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000214748	protein_coding		9	-1	44417987	746
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000211948	protein_coding	principal2	8	-1	70792437	4251
ENSMUSG00000015290	protein_coding	Ubl4a	ENSMUST00000155676	protein_coding	principal1	X	-1	74368673	2442
ENSMUSG00000105944	processed_pseudogene	Gm5075	ENSMUST00000196916	processed_pseudogene		3	-1	107868643	622
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000217270	protein_coding		9	-1	44418021	681
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000048885	protein_coding		4	1	86053923	1842
ENSMUSG00000106359	TEC	4930554G22Rik	ENSMUST00000196102	TEC		3	1	107874795	686
ENSMUSG00000013523	protein_coding	Bcas1	ENSMUST00000154650	protein_coding		2	-1	170406509	2222
ENSMUSG00000055214	protein_coding	Pld5	ENSMUST00000156184	retained_intron		1	-1	176213841	3274
ENSMUSG00000043923	protein_coding	Ccdc84	ENSMUST00000216572	protein_coding		9	-1	44418004	501
ENSMUSG00000055214	protein_coding	Pld5	ENSMUST00000144340	retained_intron		1	-1	176275275	4215
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000212172	retained_intron		8	-1	70781388	894
ENSMUSG00000015290	protein_coding	Ubl4a	ENSMUST00000126117	processed_transcript		X	-1	74368558	2220
ENSMUSG00000024136	protein_coding	Dnase1l2	ENSMUST00000153858	retained_intron		17	-1	24442200	1543
ENSMUSG00000055214	protein_coding	Pld5	ENSMUST00000111166	protein_coding		1	-1	176275274	1370
ENSMUSG00000042873	protein_coding	Lhfpl4	ENSMUST00000162280	protein_coding	principal1	6	-1	113195384	4762
ENSMUSG00000015290	protein_coding	Ubl4a	ENSMUST00000015434	nonsense_mediated_decay		X	-1	74368466	782
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000211841	retained_intron		8	-1	70792401	634
ENSMUSG00000079853	protein_coding	Klra1	ENSMUST00000032288	protein_coding	principal1	6	-1	130386874	1668
ENSMUSG00000015290	protein_coding	Ubl4a	ENSMUST00000140632	retained_intron		X	-1	74368496	681
ENSMUSG00000055214	protein_coding	Pld5	ENSMUST00000111167	protein_coding		1	-1	176213942	1861
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000099709	protein_coding		2	-1	91975864	3512
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000212757	protein_coding		8	-1	70805054	530
ENSMUSG00000046180	protein_coding	4930550L24Rik	ENSMUST00000118305	protein_coding	principal1	X	1	58909360	1684
ENSMUSG00000104363	TEC	Gm38081	ENSMUST00000192680	TEC		1	-1	176032723	1645
ENSMUSG00000015290	protein_coding	Ubl4a	ENSMUST00000126191	retained_intron		X	-1	74368513	614
ENSMUSG00000046180	protein_coding	4930550L24Rik	ENSMUST00000062542	protein_coding	principal1	X	1	58911461	1572
ENSMUSG00000031007	protein_coding	Atp6ap2	ENSMUST00000033313	protein_coding	principal1	X	1	12587801	2324
ENSMUSG00000042873	protein_coding	Lhfpl4	ENSMUST00000203665	protein_coding		6	-1	113193943	1414
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000212875	protein_coding		8	-1	70804982	449
ENSMUSG00000079853	protein_coding	Klra1	ENSMUST00000127570	retained_intron		6	-1	130375467	479
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000207569	protein_coding		4	1	43058969	14754
ENSMUSG00000021427	protein_coding	Ssr1	ENSMUST00000021864	protein_coding	principal1	13	-1	37994217	9333
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000079978	protein_coding	principal2	4	1	43058969	6354
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000212038	protein_coding		8	-1	70792401	492
ENSMUSG00000015290	protein_coding	Ubl4a	ENSMUST00000125914	processed_transcript		X	-1	74368503	369
ENSMUSG00000021427	protein_coding	Ssr1	ENSMUST00000224399	protein_coding		13	-1	37993704	523
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000212673	protein_coding		8	-1	70790778	391
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000212551	protein_coding		8	-1	70792422	438
ENSMUSG00000118090	lincRNA	Gm50236	ENSMUST00000236069	lincRNA		19	1	21208477	969
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000151611	processed_transcript		4	1	43058976	2173
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000028667	protein_coding	principal1	2	-1	91963657	3584
ENSMUSG00000066797	protein_coding	Zfp648	ENSMUST00000086195	protein_coding	principal1	1	1	154201187	1892
ENSMUSG00000074671	protein_coding	Tspyl3	ENSMUST00000099194	protein_coding	principal1	2	-1	153225441	3072
ENSMUSG00000031833	protein_coding	Mast3	ENSMUST00000212001	protein_coding		8	-1	70804985	322
ENSMUSG00000030178	transcribed_unprocessed_pseudogene	Klra13-ps	ENSMUST00000205252	processed_transcript		6	-1	130303218	640
ENSMUSG00000015290	protein_coding	Ubl4a	ENSMUST00000178691	protein_coding	principal1	X	-1	74373218	1038
ENSMUSG00000045100	protein_coding	Slc25a26	ENSMUST00000061118	protein_coding	principal1	6	1	94500331	1922
ENSMUSG00000118086	lincRNA	AC106834.1	ENSMUST00000237231	lincRNA		19	-1	21170841	1771
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000171234	retained_intron		4	1	43058984	3617
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000239257	protein_coding		2	-1	91965600	3393
ENSMUSG00000028009	lincRNA	1700061I17Rik	ENSMUST00000029642	lincRNA		3	-1	117077765	1962
ENSMUSG00000028024	protein_coding	Enpep	ENSMUST00000029658	protein_coding	principal1	3	-1	129332720	4181
ENSMUSG00000118086	lincRNA	AC106834.1	ENSMUST00000235456	lincRNA		19	-1	21248451	1130
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000068452	protein_coding		8	-1	95807381	8152
ENSMUSG00000118086	lincRNA	AC106834.1	ENSMUST00000235897	lincRNA		19	-1	21208462	661
ENSMUSG00000030178	transcribed_unprocessed_pseudogene	Klra13-ps	ENSMUST00000204367	transcribed_unprocessed_pseudogene		6	-1	130306428	850
ENSMUSG00000030178	transcribed_unprocessed_pseudogene	Klra13-ps	ENSMUST00000144414	processed_transcript		6	-1	130306428	769
ENSMUSG00000030178	transcribed_unprocessed_pseudogene	Klra13-ps	ENSMUST00000125813	transcribed_unprocessed_pseudogene		6	-1	130306427	802
ENSMUSG00000118044	processed_pseudogene	Gm50243	ENSMUST00000236381	processed_pseudogene		19	-1	21263212	707
ENSMUSG00000117676	antisense	Gm50314	ENSMUST00000236074	antisense		18	1	84625745	1370
ENSMUSG00000086428	antisense	Gm15199	ENSMUST00000129933	antisense		10	-1	42758660	542
ENSMUSG00000048583	protein_coding	Igf2	ENSMUST00000000033	protein_coding	principal1	7	-1	142657496	3708
ENSMUSG00000108592	lincRNA	Gm38973	ENSMUST00000206810	lincRNA		7	-1	27651059	878
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000111303	protein_coding		2	-1	91950427	4169
ENSMUSG00000108592	lincRNA	Gm38973	ENSMUST00000238805	lincRNA		7	-1	27650983	580
ENSMUSG00000118518	unitary_pseudogene	AC074312.1	ENSMUST00000239103	unitary_pseudogene		7	1	27643098	437
ENSMUSG00000028024	protein_coding	Enpep	ENSMUST00000170918	nonsense_mediated_decay		3	-1	129332264	2655
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000111824	protein_coding	alternative2	2	-1	77946180	2603
ENSMUSG00000028024	protein_coding	Enpep	ENSMUST00000164443	retained_intron		3	-1	129281103	780
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000142231	nonsense_mediated_decay		2	-1	91965600	3109
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000211887	protein_coding	principal2	8	-1	95807464	8364
ENSMUSG00000028024	protein_coding	Enpep	ENSMUST00000169240	nonsense_mediated_decay		3	-1	129309034	836
ENSMUSG00000116548	TEC	Gm49773	ENSMUST00000231925	TEC		17	1	27552972	352
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000134103	retained_intron		2	-1	91933932	480
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000138894	retained_intron		2	-1	91934581	905
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000128902	retained_intron		2	-1	91935499	802
ENSMUSG00000116657	antisense	Gm49774	ENSMUST00000231483	antisense		17	-1	27556518	10812
ENSMUSG00000028024	protein_coding	Enpep	ENSMUST00000165217	retained_intron		3	-1	129332720	2178
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000148297	retained_intron		2	-1	91934511	551
ENSMUSG00000116884	antisense	C130040N14Rik	ENSMUST00000231648	antisense		17	1	27565112	1111
ENSMUSG00000116884	antisense	C130040N14Rik	ENSMUST00000231475	antisense		17	1	27565112	1109
ENSMUSG00000025025	protein_coding	Mxi1	ENSMUST00000237480	protein_coding		19	1	53313066	1544
ENSMUSG00000051413	protein_coding	Plagl2	ENSMUST00000056924	protein_coding	principal1	2	-1	153241426	5485
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000130023	retained_intron		2	-1	91935600	994
ENSMUSG00000062480	protein_coding	Acat3	ENSMUST00000160378	protein_coding	principal1	17	-1	12940600	2144
ENSMUSG00000021239	protein_coding	Vsx2	ENSMUST00000021665	protein_coding	principal3	12	1	84569762	3270
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000124427	processed_transcript		2	-1	91938028	729
ENSMUSG00000081151	processed_pseudogene	Gm11448	ENSMUST00000120427	processed_pseudogene		2	1	161287220	450
ENSMUSG00000024069	protein_coding	Slc30a6	ENSMUST00000234515	nonsense_mediated_decay		17	1	74395608	1589
ENSMUSG00000048583	protein_coding	Igf2	ENSMUST00000121128	protein_coding		7	-1	142659489	4722
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000163653	protein_coding		4	1	43059073	5034
ENSMUSG00000038042	protein_coding	Ptpdc1	ENSMUST00000035824	protein_coding	principal2	13	-1	48625664	4402
ENSMUSG00000051413	protein_coding	Plagl2	ENSMUST00000109795	protein_coding	principal1	2	-1	153237908	5571
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000212302	retained_intron		8	-1	95731324	3809
ENSMUSG00000024136	protein_coding	Dnase1l2	ENSMUST00000088506	protein_coding	principal1	17	-1	24443105	1921
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000107952	protein_coding		4	1	43059073	5037
ENSMUSG00000025025	protein_coding	Mxi1	ENSMUST00000111737	protein_coding	principal1	19	1	53329413	2340
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000142090	nonsense_mediated_decay		2	-1	91950311	788
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000065889	protein_coding	principal3	2	-1	77946375	3471
ENSMUSG00000048583	protein_coding	Igf2	ENSMUST00000105936	protein_coding	principal1	7	-1	142661305	3970
ENSMUSG00000038042	protein_coding	Ptpdc1	ENSMUST00000238995	protein_coding	alternative2	13	-1	48593360	2962
ENSMUSG00000024136	protein_coding	Dnase1l2	ENSMUST00000119932	protein_coding	principal1	17	-1	24443084	1629
ENSMUSG00000040479	protein_coding	Dgkz	ENSMUST00000126473	processed_transcript		2	-1	91945257	412
ENSMUSG00000021239	protein_coding	Vsx2	ENSMUST00000169934	protein_coding	alternative1	12	1	84569840	3249
ENSMUSG00000045100	protein_coding	Slc25a26	ENSMUST00000204764	nonsense_mediated_decay		6	1	94500333	1339
ENSMUSG00000038042	protein_coding	Ptpdc1	ENSMUST00000222028	protein_coding	alternative2	13	-1	48625581	3164
ENSMUSG00000062480	protein_coding	Acat3	ENSMUST00000043923	protein_coding	principal1	17	-1	12940402	2123
ENSMUSG00000115174	lincRNA	Gm35996	ENSMUST00000226274	lincRNA		15	-1	25128404	2318
ENSMUSG00000048583	protein_coding	Igf2	ENSMUST00000163148	processed_transcript		7	-1	142653030	958
ENSMUSG00000013523	protein_coding	Bcas1	ENSMUST00000068137	protein_coding	alternative2	2	-1	170427845	2769
ENSMUSG00000045100	protein_coding	Slc25a26	ENSMUST00000204235	nonsense_mediated_decay		6	1	94500369	2076
ENSMUSG00000025025	protein_coding	Mxi1	ENSMUST00000025998	protein_coding		19	1	53329458	5036
ENSMUSG00000024136	protein_coding	Dnase1l2	ENSMUST00000129401	nonsense_mediated_decay		17	-1	24442152	689
ENSMUSG00000030220	protein_coding	Arhgdib	ENSMUST00000111892	protein_coding	principal1	6	-1	136941503	1153
ENSMUSG00000048583	protein_coding	Igf2	ENSMUST00000105935	protein_coding	principal1	7	-1	142666816	650
ENSMUSG00000025025	protein_coding	Mxi1	ENSMUST00000237837	protein_coding		19	1	53329461	939
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000107953	protein_coding	alternative1	4	1	43059080	5034
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000137494	processed_transcript		2	-1	77924528	2205
ENSMUSG00000025025	protein_coding	Mxi1	ENSMUST00000235880	protein_coding		19	1	53329696	1438
ENSMUSG00000038042	protein_coding	Ptpdc1	ENSMUST00000221887	retained_intron		13	-1	48583562	1072
ENSMUSG00000048583	protein_coding	Igf2	ENSMUST00000145896	protein_coding		7	-1	142661870	376
ENSMUSG00000045100	protein_coding	Slc25a26	ENSMUST00000205254	processed_transcript		6	1	94500549	376
ENSMUSG00000062480	protein_coding	Acat3	ENSMUST00000160921	retained_intron		17	-1	12927682	716
ENSMUSG00000048583	protein_coding	Igf2	ENSMUST00000178921	protein_coding		7	-1	142656018	462
ENSMUSG00000030220	protein_coding	Arhgdib	ENSMUST00000032344	protein_coding	principal1	6	-1	136941756	1193
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000213006	nonsense_mediated_decay		8	-1	95807396	7479
ENSMUSG00000025025	protein_coding	Mxi1	ENSMUST00000236973	protein_coding		19	1	53329808	833
ENSMUSG00000024136	protein_coding	Dnase1l2	ENSMUST00000154675	retained_intron		17	-1	24442701	822
ENSMUSG00000009927	protein_coding	Rps25	ENSMUST00000080300	protein_coding	principal1	9	1	44407139	1280
ENSMUSG00000060673	protein_coding	4930595M18Rik	ENSMUST00000080083	protein_coding	principal1	X	-1	81458121	2644
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000111819	protein_coding	alternative2	2	-1	77946183	3090
ENSMUSG00000038042	protein_coding	Ptpdc1	ENSMUST00000223025	nonsense_mediated_decay		13	-1	48625509	1873
ENSMUSG00000056162	protein_coding	Cndp1	ENSMUST00000070139	protein_coding	principal1	18	-1	84650095	2829
ENSMUSG00000045100	protein_coding	Slc25a26	ENSMUST00000204985	nonsense_mediated_decay		6	1	94507578	2048
ENSMUSG00000048583	protein_coding	Igf2	ENSMUST00000143666	retained_intron		7	-1	142661205	649
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000212369	retained_intron		8	-1	95730605	479
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000132310	processed_transcript		4	1	43115110	780
ENSMUSG00000009927	protein_coding	Rps25	ENSMUST00000213116	retained_intron		9	1	44407660	1116
ENSMUSG00000030220	protein_coding	Arhgdib	ENSMUST00000111891	protein_coding	principal1	6	-1	136941899	828
ENSMUSG00000108052	transcribed_processed_pseudogene	Gm8479	ENSMUST00000204366	processed_transcript		6	1	65328105	1070
ENSMUSG00000056643	protein_coding	Chst13	ENSMUST00000070890	protein_coding	principal1	6	-1	90325185	1653
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000212415	nonsense_mediated_decay		8	-1	95739821	956
ENSMUSG00000108052	transcribed_processed_pseudogene	Gm8479	ENSMUST00000203825	transcribed_processed_pseudogene		6	1	65328225	718
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000111818	protein_coding	alternative2	2	-1	77946353	3255
ENSMUSG00000009927	protein_coding	Rps25	ENSMUST00000216076	protein_coding		9	1	44407695	393
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000168032	protein_coding		4	1	43180568	768
ENSMUSG00000024136	protein_coding	Dnase1l2	ENSMUST00000148820	nonsense_mediated_decay		17	-1	24443104	621
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000212535	processed_transcript		8	-1	95732736	1546
ENSMUSG00000048583	protein_coding	Igf2	ENSMUST00000097936	protein_coding	principal1	7	-1	142657466	2503
ENSMUSG00000087031	lincRNA	Gm14241	ENSMUST00000151260	lincRNA		2	1	161331314	264
ENSMUSG00000033024	protein_coding	Klra9	ENSMUST00000112032	protein_coding	principal1	6	-1	130193112	1279
ENSMUSG00000045100	protein_coding	Slc25a26	ENSMUST00000205173	processed_transcript		6	1	94534140	1453
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000212712	retained_intron		8	-1	95736729	656
ENSMUSG00000030220	protein_coding	Arhgdib	ENSMUST00000204934	protein_coding		6	-1	136941868	396
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000207708	protein_coding		4	1	43209498	6574
ENSMUSG00000107309	processed_pseudogene	Gm43232	ENSMUST00000201346	processed_pseudogene		5	1	78540528	364
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000139842	processed_transcript		2	-1	77908167	1066
ENSMUSG00000025025	protein_coding	Mxi1	ENSMUST00000235201	protein_coding		19	1	53330408	1018
ENSMUSG00000083374	processed_pseudogene	Gm11449	ENSMUST00000119175	processed_pseudogene		2	-1	161483038	476
ENSMUSG00000026970	protein_coding	Rbms1	ENSMUST00000028347	protein_coding	alternative1	2	-1	60963192	4436
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000212195	retained_intron		8	-1	95740182	696
ENSMUSG00000107308	processed_pseudogene	Gm43234	ENSMUST00000200713	processed_pseudogene		5	1	79440197	18
ENSMUSG00000045100	protein_coding	Slc25a26	ENSMUST00000203484	processed_transcript		6	1	94578190	381
ENSMUSG00000086266	antisense	Igf2os	ENSMUST00000141681	antisense		7	1	142659693	4778
ENSMUSG00000030220	protein_coding	Arhgdib	ENSMUST00000154440	protein_coding		6	-1	136939591	524
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000127597	retained_intron		4	1	43230098	495
ENSMUSG00000009927	protein_coding	Rps25	ENSMUST00000216867	protein_coding	principal1	9	1	44407697	577
ENSMUSG00000025025	protein_coding	Mxi1	ENSMUST00000237295	retained_intron		19	1	53370023	1249
ENSMUSG00000013523	protein_coding	Bcas1	ENSMUST00000013667	protein_coding	principal3	2	-1	170427828	2916
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000212340	retained_intron		8	-1	95738536	2381
ENSMUSG00000070794	lincRNA	BC016548	ENSMUST00000153797	lincRNA		2	-1	103389042	805
ENSMUSG00000086266	antisense	Igf2os	ENSMUST00000141551	antisense		7	1	142659712	341
ENSMUSG00000100943	processed_transcript	Gm29229	ENSMUST00000188874	processed_transcript		2	-1	161514012	323
ENSMUSG00000033024	protein_coding	Klra9	ENSMUST00000071554	protein_coding	principal1	6	-1	130193112	1123
ENSMUSG00000086269	antisense	Tmcc3os	ENSMUST00000146744	antisense		10	-1	94612084	2912
ENSMUSG00000009927	protein_coding	Rps25	ENSMUST00000217231	retained_intron		9	1	44407698	454
ENSMUSG00000107183	processed_pseudogene	Gm18452	ENSMUST00000202968	processed_pseudogene		5	1	79507401	1111
ENSMUSG00000086266	antisense	Igf2os	ENSMUST00000124393	antisense		7	1	142665138	617
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000211973	protein_coding		8	-1	95761431	2469
ENSMUSG00000070794	lincRNA	BC016548	ENSMUST00000144657	lincRNA		2	-1	103389044	640
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000022865	protein_coding	principal1	15	1	34082719	6919
ENSMUSG00000056162	protein_coding	Cndp1	ENSMUST00000235618	retained_intron		18	-1	84650055	1194
ENSMUSG00000115302	protein_coding	Gm49394	ENSMUST00000228850	protein_coding	principal1	7	-1	142669942	4738
ENSMUSG00000056162	protein_coding	Cndp1	ENSMUST00000236723	retained_intron		18	-1	84650081	1340
ENSMUSG00000104376	TEC	Gm37516	ENSMUST00000192593	TEC		1	1	182679939	1954
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000213046	protein_coding		8	-1	95807431	550
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000149945	retained_intron		4	1	43233807	3258
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000147724	processed_transcript		17	1	12915701	329
ENSMUSG00000009927	protein_coding	Rps25	ENSMUST00000215610	retained_intron		9	1	44407713	703
ENSMUSG00000056162	protein_coding	Cndp1	ENSMUST00000145981	retained_intron		18	-1	84650046	1093
ENSMUSG00000083918	processed_pseudogene	Gm14352	ENSMUST00000119250	processed_pseudogene		X	-1	3405285	449
ENSMUSG00000083829	processed_pseudogene	Gm2199	ENSMUST00000119065	processed_pseudogene		5	-1	80901623	874
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000141889	protein_coding		4	1	86053928	7805
ENSMUSG00000020023	protein_coding	Tmcc3	ENSMUST00000147869	retained_intron		10	1	94311949	629
ENSMUSG00000009927	protein_coding	Rps25	ENSMUST00000217620	retained_intron		9	1	44408011	743
ENSMUSG00000013523	protein_coding	Bcas1	ENSMUST00000156657	processed_transcript		2	-1	170349740	594
ENSMUSG00000110910	TEC	4921534A09Rik	ENSMUST00000213976	TEC		9	1	20385234	2495
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000211937	retained_intron		8	-1	95757493	500
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000163697	retained_intron		15	1	34082725	5563
ENSMUSG00000056162	protein_coding	Cndp1	ENSMUST00000130579	retained_intron		18	-1	84649946	3435
ENSMUSG00000102688	lincRNA	Gm37218	ENSMUST00000192917	lincRNA		1	1	182687730	390
ENSMUSG00000075391	processed_pseudogene	Glo1-ps	ENSMUST00000120770	processed_pseudogene		2	1	35340409	555
ENSMUSG00000020023	protein_coding	Tmcc3	ENSMUST00000132743	protein_coding		10	1	94312024	670
ENSMUSG00000056162	protein_coding	Cndp1	ENSMUST00000236714	protein_coding		18	-1	84647701	390
ENSMUSG00000013523	protein_coding	Bcas1	ENSMUST00000133673	processed_transcript		2	-1	170357113	688
ENSMUSG00000110450	processed_pseudogene	Gm7943	ENSMUST00000212078	processed_pseudogene		8	-1	73437604	1034
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000120678	protein_coding		4	1	86053975	977
ENSMUSG00000013523	protein_coding	Bcas1	ENSMUST00000152461	processed_transcript		2	-1	170349795	371
ENSMUSG00000020023	protein_coding	Tmcc3	ENSMUST00000139230	processed_transcript		10	1	94312137	386
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000153168	retained_intron		4	1	43249167	856
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000145899	protein_coding		4	1	43255537	569
ENSMUSG00000024083	protein_coding	Pja2	ENSMUST00000172818	protein_coding	principal4	17	-1	64331916	4740
ENSMUSG00000026970	protein_coding	Rbms1	ENSMUST00000112509	protein_coding		2	-1	60881470	1806
ENSMUSG00000031584	protein_coding	Gsr	ENSMUST00000154745	processed_transcript		8	1	33652523	347
ENSMUSG00000047657	processed_pseudogene	Crry-ps	ENSMUST00000079090	processed_pseudogene		8	-1	73750783	1309
ENSMUSG00000032112	protein_coding	Trappc4	ENSMUST00000213747	retained_intron		9	-1	44407106	935
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000168991	nonsense_mediated_decay		15	1	34083036	989
ENSMUSG00000024083	protein_coding	Pja2	ENSMUST00000172733	protein_coding	alternative2	17	-1	64331865	4488
ENSMUSG00000013523	protein_coding	Bcas1	ENSMUST00000147577	processed_transcript		2	-1	170388003	444
ENSMUSG00000110609	processed_pseudogene	Gm7948	ENSMUST00000212607	processed_pseudogene		8	1	73871693	844
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000163333	protein_coding		15	1	34083308	1593
ENSMUSG00000031963	protein_coding	Bmper	ENSMUST00000071982	protein_coding	principal1	9	1	23223076	3791
ENSMUSG00000110703	lincRNA	Gm45821	ENSMUST00000211967	lincRNA		8	-1	74093684	1757
ENSMUSG00000118059	processed_pseudogene	Gm6975	ENSMUST00000236554	processed_pseudogene		19	-1	49710124	732
ENSMUSG00000025369	protein_coding	Smarcc2	ENSMUST00000026433	protein_coding	principal3	10	1	128459294	4533
ENSMUSG00000043429	protein_coding	Ccdc185	ENSMUST00000060041	protein_coding	principal1	1	-1	182749180	2055
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000150043	retained_intron		4	1	86054020	2863
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000144727	processed_transcript		2	-1	77946199	2094
ENSMUSG00000094558	protein_coding	Btbd35f11	ENSMUST00000105020	protein_coding	principal1	X	-1	3443690	1960
ENSMUSG00000117697	processed_pseudogene	Siah1-ps1	ENSMUST00000236762	processed_pseudogene		19	1	49868355	847
ENSMUSG00000098112	protein_coding	Bin2	ENSMUST00000183211	protein_coding	principal2	15	-1	100669553	2036
ENSMUSG00000013523	protein_coding	Bcas1	ENSMUST00000145920	processed_transcript		2	-1	170427845	1014
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000126654	retained_intron		4	1	86087799	538
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000170050	protein_coding		15	1	34083319	1147
ENSMUSG00000024083	protein_coding	Pja2	ENSMUST00000232842	retained_intron		17	-1	64331887	3559
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000127351	processed_transcript		2	-1	77946183	1877
ENSMUSG00000013523	protein_coding	Bcas1	ENSMUST00000109152	protein_coding	alternative2	2	-1	170427845	2952
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000170553	protein_coding		15	1	34083322	659
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000127289	protein_coding		2	-1	77945938	678
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000136320	protein_coding		4	1	86199317	729
ENSMUSG00000105166	TEC	Gm42629	ENSMUST00000199063	TEC		3	1	129354004	1102
ENSMUSG00000031963	protein_coding	Bmper	ENSMUST00000217648	processed_transcript		9	1	23223286	1616
ENSMUSG00000031963	protein_coding	Bmper	ENSMUST00000214050	protein_coding		9	1	23373932	640
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000128963	protein_coding		2	-1	77946189	533
ENSMUSG00000098112	protein_coding	Bin2	ENSMUST00000182814	protein_coding		15	-1	100669505	1901
ENSMUSG00000062083	processed_pseudogene	Rpl13a-ps1	ENSMUST00000071866	processed_pseudogene		19	-1	50030735	612
ENSMUSG00000105278	TEC	Gm42630	ENSMUST00000195908	TEC		3	1	129374110	3448
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000136418	processed_transcript		4	1	86276489	359
ENSMUSG00000110761	processed_pseudogene	Gm29761	ENSMUST00000215964	processed_pseudogene		9	-1	20401860	1939
ENSMUSG00000028456	protein_coding	Unc13b	ENSMUST00000143653	retained_intron		4	1	43256830	1036
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000172083	processed_transcript		15	1	34083853	772
ENSMUSG00000098112	protein_coding	Bin2	ENSMUST00000182775	protein_coding		15	-1	100669527	1908
ENSMUSG00000086970	antisense	Bcas1os1	ENSMUST00000133586	antisense		2	1	170405181	1239
ENSMUSG00000024083	protein_coding	Pja2	ENSMUST00000024888	protein_coding	principal4	17	-1	64313031	4531
ENSMUSG00000105712	processed_pseudogene	Gm5712	ENSMUST00000199748	processed_pseudogene		3	1	129433673	1043
ENSMUSG00000098112	protein_coding	Bin2	ENSMUST00000238935	protein_coding	alternative2	15	-1	100669505	1671
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000149012	processed_transcript		2	-1	77936669	409
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000226331	retained_intron		15	1	34114087	426
ENSMUSG00000092056	processed_pseudogene	Gm7289	ENSMUST00000168993	processed_pseudogene		18	-1	84659844	734
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000156863	processed_transcript		2	-1	77936727	511
ENSMUSG00000098112	protein_coding	Bin2	ENSMUST00000182068	protein_coding		15	-1	100669505	492
ENSMUSG00000024083	protein_coding	Pja2	ENSMUST00000024889	protein_coding	alternative2	17	-1	64313031	4345
ENSMUSG00000027014	protein_coding	Cwc22	ENSMUST00000111821	protein_coding	principal3	2	-1	77946353	3388
ENSMUSG00000110811	processed_pseudogene	Gm48729	ENSMUST00000213612	processed_pseudogene		9	1	20413175	213
ENSMUSG00000098112	protein_coding	Bin2	ENSMUST00000182574	protein_coding		15	-1	100669525	662
ENSMUSG00000099933	lincRNA	4930452N14Rik	ENSMUST00000189240	lincRNA		1	-1	154256906	613
ENSMUSG00000081589	processed_pseudogene	Gm14353	ENSMUST00000122200	processed_pseudogene		X	-1	3447426	869
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000169905	protein_coding		15	1	34114942	1070
ENSMUSG00000025369	protein_coding	Smarcc2	ENSMUST00000099131	protein_coding	alternative2	10	1	128459308	4562
ENSMUSG00000082319	processed_pseudogene	Actr3-ps	ENSMUST00000118948	processed_pseudogene		X	-1	81822730	2347
ENSMUSG00000082167	processed_pseudogene	Gm14360	ENSMUST00000120670	processed_pseudogene		X	1	3484012	393
ENSMUSG00000083113	processed_pseudogene	Rpl10-ps4	ENSMUST00000117120	processed_pseudogene		X	-1	82401009	286
ENSMUSG00000026970	protein_coding	Rbms1	ENSMUST00000153555	processed_transcript		2	-1	60780941	757
ENSMUSG00000087353	processed_transcript	Gm13727	ENSMUST00000154480	processed_transcript		2	-1	77881467	424
ENSMUSG00000098112	protein_coding	Bin2	ENSMUST00000182494	processed_transcript		15	-1	100651660	306
ENSMUSG00000090891	protein_coding	D6Ertd527e	ENSMUST00000170124	protein_coding	alternative2	6	1	87104746	2161
ENSMUSG00000106258	processed_pseudogene	Rpl7a-ps7	ENSMUST00000198361	processed_pseudogene		3	1	129461972	776
ENSMUSG00000100221	lincRNA	4930532M18Rik	ENSMUST00000187189	lincRNA		1	1	154255689	481
ENSMUSG00000026970	protein_coding	Rbms1	ENSMUST00000123046	processed_transcript		2	-1	60762321	644
ENSMUSG00000098112	protein_coding	Bin2	ENSMUST00000183193	retained_intron		15	-1	100650719	546
ENSMUSG00000100221	lincRNA	4930532M18Rik	ENSMUST00000190980	lincRNA		1	1	154257003	534
ENSMUSG00000026970	protein_coding	Rbms1	ENSMUST00000128866	processed_transcript		2	-1	60888996	123
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000226992	nonsense_mediated_decay		15	1	34131164	596
ENSMUSG00000090891	protein_coding	D6Ertd527e	ENSMUST00000204927	protein_coding	principal3	6	1	87104748	2218
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000107177	retained_intron		4	1	86276766	6278
ENSMUSG00000033595	protein_coding	Lgi3	ENSMUST00000226376	processed_transcript		14	1	70530685	3019
ENSMUSG00000024764	protein_coding	Naa40	ENSMUST00000236628	nonsense_mediated_decay		19	-1	7241034	3993
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000212228	retained_intron		8	-1	95807462	2925
ENSMUSG00000022255	protein_coding	Mtdh	ENSMUST00000171711	processed_transcript		15	1	34133490	1200
ENSMUSG00000083199	processed_pseudogene	Gm9432	ENSMUST00000117810	processed_pseudogene		X	-1	12620232	759
ENSMUSG00000026970	protein_coding	Rbms1	ENSMUST00000132529	processed_transcript		2	-1	60889030	217
ENSMUSG00000090891	protein_coding	D6Ertd527e	ENSMUST00000203747	protein_coding	alternative2	6	1	87104748	2216
ENSMUSG00000100031	processed_pseudogene	Gm18727	ENSMUST00000185981	processed_pseudogene		1	-1	154323608	553
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000212556	processed_transcript		8	-1	95766046	521
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000109198	protein_coding	principal1	11	1	49203292	3872
ENSMUSG00000026970	protein_coding	Rbms1	ENSMUST00000125485	processed_transcript		2	-1	60888508	202
ENSMUSG00000026970	protein_coding	Rbms1	ENSMUST00000151846	processed_transcript		2	-1	60888055	224
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000212323	nonsense_mediated_decay		8	-1	95807433	3277
ENSMUSG00000025369	protein_coding	Smarcc2	ENSMUST00000105235	protein_coding	alternative2	10	1	128459321	4032
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000137061	protein_coding		11	1	49203296	542
ENSMUSG00000090891	protein_coding	D6Ertd527e	ENSMUST00000203725	processed_transcript		6	1	87104782	668
ENSMUSG00000079871	processed_pseudogene	Gm4984	ENSMUST00000115987	processed_pseudogene		X	1	12652303	360
ENSMUSG00000066113	protein_coding	Adamtsl1	ENSMUST00000107178	protein_coding	principal1	4	1	86053915	7839
ENSMUSG00000090891	protein_coding	D6Ertd527e	ENSMUST00000205257	processed_transcript		6	1	87104813	671
ENSMUSG00000111041	processed_pseudogene	Gm3011	ENSMUST00000215669	processed_pseudogene		9	1	23776492	582
ENSMUSG00000036550	protein_coding	Cnot1	ENSMUST00000098473	protein_coding	alternative1	8	-1	95807462	8390
ENSMUSG00000081862	processed_pseudogene	Gm12413	ENSMUST00000121508	processed_pseudogene		4	-1	85245762	312
ENSMUSG00000110829	processed_pseudogene	Gm47638	ENSMUST00000215376	processed_pseudogene		9	1	23876783	378
ENSMUSG00000026970	protein_coding	Rbms1	ENSMUST00000164147	protein_coding	principal4	2	-1	60881438	2543
ENSMUSG00000032112	protein_coding	Trappc4	ENSMUST00000034623	protein_coding	principal1	9	-1	44407600	1220
ENSMUSG00000031137	protein_coding	Fgf13	ENSMUST00000033473	protein_coding	principal3	X	-1	59134436	2499
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000128932	processed_transcript		11	1	49203485	356
ENSMUSG00000025369	protein_coding	Smarcc2	ENSMUST00000220384	processed_transcript		10	1	128459656	735
ENSMUSG00000103001	TEC	A930005N03Rik	ENSMUST00000194920	TEC		1	-1	34271128	1247
ENSMUSG00000081921	processed_pseudogene	Gm12858	ENSMUST00000121913	processed_pseudogene		4	-1	118441220	208
ENSMUSG00000110489	lincRNA	Gm31659	ENSMUST00000212289	lincRNA		8	-1	95817678	338
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000157023	retained_intron		11	1	49203485	1457
ENSMUSG00000011305	protein_coding	Plin5	ENSMUST00000019808	protein_coding	principal1	17	-1	56117596	1986
ENSMUSG00000075558	antisense	Gm17151	ENSMUST00000105760	antisense		10	-1	80768987	367
ENSMUSG00000112564	antisense	Gm47419	ENSMUST00000219794	antisense		10	-1	112231141	625
ENSMUSG00000110489	lincRNA	Gm31659	ENSMUST00000211989	lincRNA		8	-1	95818274	481
ENSMUSG00000032112	protein_coding	Trappc4	ENSMUST00000217163	protein_coding		9	-1	44407332	1185
ENSMUSG00000031137	protein_coding	Fgf13	ENSMUST00000138503	processed_transcript		X	-1	59133214	666
ENSMUSG00000110489	lincRNA	Gm31659	ENSMUST00000212957	lincRNA		8	-1	95817691	153
ENSMUSG00000096992	processed_transcript	Gm26788	ENSMUST00000181692	antisense		1	-1	34178271	1750
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000150284	protein_coding		11	1	49203485	366
ENSMUSG00000031137	protein_coding	Fgf13	ENSMUST00000123660	processed_transcript		X	-1	59133162	151
ENSMUSG00000025369	protein_coding	Smarcc2	ENSMUST00000217751	retained_intron		10	1	128474201	865
ENSMUSG00000032112	protein_coding	Trappc4	ENSMUST00000217084	nonsense_mediated_decay		9	-1	44407042	401
ENSMUSG00000074136	antisense	4930513N10Rik	ENSMUST00000212647	antisense		8	1	95806744	3957
ENSMUSG00000031137	protein_coding	Fgf13	ENSMUST00000124402	protein_coding		X	-1	59567472	575
ENSMUSG00000032112	protein_coding	Trappc4	ENSMUST00000215072	processed_transcript		9	-1	44407341	299
ENSMUSG00000096992	processed_transcript	Gm26788	ENSMUST00000187268	retained_intron		1	-1	34178446	3416
ENSMUSG00000032112	protein_coding	Trappc4	ENSMUST00000215731	retained_intron		9	-1	44407362	1339
ENSMUSG00000107154	processed_pseudogene	Gm7041	ENSMUST00000201227	processed_pseudogene		5	1	151281123	524
ENSMUSG00000103364	TEC	Gm38157	ENSMUST00000194178	TEC		1	1	34032100	1698
ENSMUSG00000074136	antisense	4930513N10Rik	ENSMUST00000145562	antisense		8	1	95806830	2803
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000109197	protein_coding	principal1	11	1	49203498	4029
ENSMUSG00000011305	protein_coding	Plin5	ENSMUST00000113072	protein_coding	principal1	17	-1	56117298	1986
ENSMUSG00000032112	protein_coding	Trappc4	ENSMUST00000217224	retained_intron		9	-1	44407351	785
ENSMUSG00000021700	protein_coding	Rab3c	ENSMUST00000167824	protein_coding	principal2	13	-1	110280150	8444
ENSMUSG00000074136	antisense	4930513N10Rik	ENSMUST00000132616	antisense		8	1	95809033	490
ENSMUSG00000107387	lincRNA	5430435K18Rik	ENSMUST00000202597	lincRNA		5	1	151252305	661
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000151228	protein_coding		11	1	49203506	640
ENSMUSG00000107011	protein_coding	Gm42906	ENSMUST00000202365	protein_coding	principal1	5	-1	151428163	408
ENSMUSG00000074136	antisense	4930513N10Rik	ENSMUST00000098472	antisense		8	1	95806973	3229
ENSMUSG00000031137	protein_coding	Fgf13	ENSMUST00000145767	protein_coding		X	-1	59567821	617
ENSMUSG00000021700	protein_coding	Rab3c	ENSMUST00000223922	protein_coding	alternative1	13	-1	110280901	2398
ENSMUSG00000031137	protein_coding	Fgf13	ENSMUST00000119833	protein_coding		X	-1	59568071	2237
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000133150	protein_coding		11	1	49203734	880
ENSMUSG00000106343	processed_pseudogene	Gm18430	ENSMUST00000197534	processed_pseudogene		3	-1	117101514	682
ENSMUSG00000031137	protein_coding	Fgf13	ENSMUST00000131319	protein_coding		X	-1	59568071	456
ENSMUSG00000024735	protein_coding	Prpf19	ENSMUST00000025642	protein_coding	principal1	19	1	10895231	2134
ENSMUSG00000021700	protein_coding	Rab3c	ENSMUST00000224180	protein_coding		13	-1	110280185	967
ENSMUSG00000106314	processed_pseudogene	Gm9632	ENSMUST00000195934	processed_pseudogene		3	1	117176019	643
ENSMUSG00000032083	protein_coding	Apoa1	ENSMUST00000034588	protein_coding	principal1	9	1	46228580	1035
ENSMUSG00000097321	processed_transcript	1700028E10Rik	ENSMUST00000181555	retained_intron		5	1	151368675	1977
ENSMUSG00000105914	processed_pseudogene	Gm19243	ENSMUST00000198592	processed_pseudogene		3	-1	117223602	269
ENSMUSG00000024735	protein_coding	Prpf19	ENSMUST00000186416	retained_intron		19	1	10895277	601
ENSMUSG00000031137	protein_coding	Fgf13	ENSMUST00000119306	protein_coding	alternative1	X	-1	59166164	2091
ENSMUSG00000021700	protein_coding	Rab3c	ENSMUST00000224287	processed_transcript		13	-1	110280996	923
ENSMUSG00000057446	protein_coding	Cts8	ENSMUST00000021891	protein_coding	principal1	13	-1	61255358	2505
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000136539	protein_coding		11	1	49204319	2992
ENSMUSG00000022842	protein_coding	Ece2	ENSMUST00000003898	protein_coding	principal3	16	1	20629828	3152
ENSMUSG00000032083	protein_coding	Apoa1	ENSMUST00000132155	protein_coding		9	1	46228721	602
ENSMUSG00000106342	lincRNA	Gm42891	ENSMUST00000199340	lincRNA		3	1	117255132	281
ENSMUSG00000021700	protein_coding	Rab3c	ENSMUST00000226040	retained_intron		13	-1	110280150	2846
ENSMUSG00000024735	protein_coding	Prpf19	ENSMUST00000187751	retained_intron		19	1	10895282	781
ENSMUSG00000020023	protein_coding	Tmcc3	ENSMUST00000065060	protein_coding	principal3	10	1	94514857	5530
ENSMUSG00000097321	processed_transcript	1700028E10Rik	ENSMUST00000181114	lincRNA		5	1	151368709	2034
ENSMUSG00000031137	protein_coding	Fgf13	ENSMUST00000150413	retained_intron		X	-1	59568048	600
ENSMUSG00000033595	protein_coding	Lgi3	ENSMUST00000047331	protein_coding	principal1	14	1	70530828	3174
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000136691	protein_coding		11	1	49213592	743
ENSMUSG00000081209	processed_pseudogene	Gm14890	ENSMUST00000117660	processed_pseudogene		X	1	59196963	676
ENSMUSG00000024735	protein_coding	Prpf19	ENSMUST00000190275	retained_intron		19	1	10895373	708
ENSMUSG00000097321	processed_transcript	1700028E10Rik	ENSMUST00000202024	lincRNA		5	1	151368718	924
ENSMUSG00000046605	protein_coding	B3gntl1	ENSMUST00000067399	protein_coding	principal2	11	-1	121673153	2864
ENSMUSG00000083877	processed_pseudogene	Gm14740	ENSMUST00000118538	processed_pseudogene		X	1	82441600	1150
ENSMUSG00000097321	processed_transcript	1700028E10Rik	ENSMUST00000202216	lincRNA		5	1	151400144	557
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000061757	protein_coding	principal1	11	1	49214549	3852
ENSMUSG00000082913	processed_pseudogene	Gm14739	ENSMUST00000120424	processed_pseudogene		X	-1	82687822	802
ENSMUSG00000020023	protein_coding	Tmcc3	ENSMUST00000148823	protein_coding		10	1	94545431	638
ENSMUSG00000033595	protein_coding	Lgi3	ENSMUST00000226548	protein_coding		14	1	70530870	1001
ENSMUSG00000034032	protein_coding	Rpap1	ENSMUST00000110793	protein_coding	principal1	2	-1	119787504	5458
ENSMUSG00000046605	protein_coding	B3gntl1	ENSMUST00000062654	protein_coding	alternative2	11	-1	121673153	1488
ENSMUSG00000021003	protein_coding	Galc	ENSMUST00000021390	protein_coding	principal1	12	-1	98259459	3832
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000190571	protein_coding	principal5	1	1	118389058	7910
ENSMUSG00000037095	protein_coding	Lrg1	ENSMUST00000041357	protein_coding	principal1	17	-1	56122001	1408
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000025338	protein_coding	principal1	17	1	37045966	5248
ENSMUSG00000114473	protein_coding	Gm49398	ENSMUST00000223988	nonsense_mediated_decay	principal1	13	-1	61288839	3955
ENSMUSG00000020023	protein_coding	Tmcc3	ENSMUST00000148910	protein_coding		10	1	94550852	420
ENSMUSG00000089727	protein_coding	Klra8	ENSMUST00000014476	protein_coding	principal1	6	-1	130129898	1178
ENSMUSG00000046311	protein_coding	Zfp62	ENSMUST00000180016	protein_coding	principal1	11	1	49212688	3964
ENSMUSG00000097321	processed_transcript	1700028E10Rik	ENSMUST00000201142	lincRNA		5	1	151406504	2310
ENSMUSG00000097321	processed_transcript	1700028E10Rik	ENSMUST00000201853	lincRNA		5	1	151406526	767
ENSMUSG00000021003	protein_coding	Galc	ENSMUST00000221063	protein_coding		12	-1	98243465	1619
ENSMUSG00000104157	lincRNA	Gm38101	ENSMUST00000193484	lincRNA		1	1	176276213	3557
ENSMUSG00000102446	processed_pseudogene	Gm17965	ENSMUST00000193904	processed_pseudogene		1	-1	176339643	517
ENSMUSG00000021003	protein_coding	Galc	ENSMUST00000222703	processed_transcript		12	-1	98216528	685
ENSMUSG00000114867	transcribed_unprocessed_pseudogene	Cts8-ps	ENSMUST00000224763	processed_transcript		13	-1	61288850	4221
ENSMUSG00000024735	protein_coding	Prpf19	ENSMUST00000179297	protein_coding		19	1	10895414	6035
ENSMUSG00000106092	TEC	Gm43072	ENSMUST00000200283	TEC		3	1	129538141	1671
ENSMUSG00000022793	protein_coding	B4galt4	ENSMUST00000023482	protein_coding	principal1	16	1	38742264	2304
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000022172	protein_coding	principal2	13	-1	96542485	4225
ENSMUSG00000022842	protein_coding	Ece2	ENSMUST00000152246	retained_intron		16	1	20629845	1976
ENSMUSG00000114867	transcribed_unprocessed_pseudogene	Cts8-ps	ENSMUST00000223587	transcribed_unprocessed_pseudogene		13	-1	61287683	1017
ENSMUSG00000004892	protein_coding	Bcan	ENSMUST00000090971	protein_coding	principal1	3	-1	88000230	3141
ENSMUSG00000054622	lincRNA	D730045B01Rik	ENSMUST00000186838	lincRNA		5	-1	151428210	1543
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000173823	nonsense_mediated_decay		17	1	37046020	4204
ENSMUSG00000054622	lincRNA	D730045B01Rik	ENSMUST00000067770	lincRNA		5	-1	151369172	309
ENSMUSG00000022842	protein_coding	Ece2	ENSMUST00000122306	protein_coding		16	1	20629845	2495
ENSMUSG00000114867	transcribed_unprocessed_pseudogene	Cts8-ps	ENSMUST00000225290	processed_transcript		13	-1	61288850	565
ENSMUSG00000042628	protein_coding	Zfyve1	ENSMUST00000221919	protein_coding	principal1	12	-1	83597114	4420
ENSMUSG00000020023	protein_coding	Tmcc3	ENSMUST00000117460	protein_coding	alternative1	10	1	94550872	3217
ENSMUSG00000022793	protein_coding	B4galt4	ENSMUST00000114712	protein_coding	principal1	16	1	38742266	2168
ENSMUSG00000004892	protein_coding	Bcan	ENSMUST00000194596	retained_intron		3	-1	87994455	1473
ENSMUSG00000034032	protein_coding	Rpap1	ENSMUST00000099529	protein_coding	principal1	2	-1	119787528	4813
ENSMUSG00000072718	protein_coding	Klra10	ENSMUST00000112020	protein_coding	principal1	6	-1	130281928	823
ENSMUSG00000024764	protein_coding	Naa40	ENSMUST00000025675	protein_coding	principal1	19	-1	7241183	3231
ENSMUSG00000022842	protein_coding	Ece2	ENSMUST00000133344	protein_coding	alternative1	16	1	20629851	3042
ENSMUSG00000021003	protein_coding	Galc	ENSMUST00000222042	processed_transcript		12	-1	98259298	1646
ENSMUSG00000020805	protein_coding	Slc13a5	ENSMUST00000021161	protein_coding	principal1	11	-1	72266659	3329
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000174456	protein_coding		17	1	37046028	1595
ENSMUSG00000021003	protein_coding	Galc	ENSMUST00000222379	retained_intron		12	-1	98237008	3771
ENSMUSG00000022793	protein_coding	B4galt4	ENSMUST00000154902	nonsense_mediated_decay		16	1	38742296	2009
ENSMUSG00000057400	protein_coding	Ces1c	ENSMUST00000034189	protein_coding	principal1	8	-1	93131271	1828
ENSMUSG00000021003	protein_coding	Galc	ENSMUST00000220501	retained_intron		12	-1	98258783	4439
ENSMUSG00000004892	protein_coding	Bcan	ENSMUST00000192274	retained_intron		3	-1	87997855	2431
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000174826	retained_intron		17	1	37046199	237
ENSMUSG00000022793	protein_coding	B4galt4	ENSMUST00000231655	protein_coding		16	1	38742321	746
ENSMUSG00000024764	protein_coding	Naa40	ENSMUST00000236769	protein_coding		19	-1	7241056	3324
ENSMUSG00000022842	protein_coding	Ece2	ENSMUST00000145511	retained_intron		16	1	20631145	803
ENSMUSG00000102973	TEC	E430014B02Rik	ENSMUST00000194215	TEC		17	-1	51748684	3156
ENSMUSG00000042628	protein_coding	Zfyve1	ENSMUST00000048319	protein_coding	principal1	12	-1	83597222	4036
ENSMUSG00000020805	protein_coding	Slc13a5	ENSMUST00000208056	protein_coding		11	-1	72266593	3111
ENSMUSG00000021003	protein_coding	Galc	ENSMUST00000221322	retained_intron		12	-1	98259347	4153
ENSMUSG00000044148	protein_coding	1810030O07Rik	ENSMUST00000060108	protein_coding	principal1	X	-1	12673668	2699
ENSMUSG00000103216	TEC	Gm37248	ENSMUST00000193576	TEC		17	-1	51799190	3174
ENSMUSG00000020805	protein_coding	Slc13a5	ENSMUST00000208912	protein_coding		11	-1	72266593	1751
ENSMUSG00000022842	protein_coding	Ece2	ENSMUST00000125971	protein_coding		16	1	20632870	3445
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000172789	protein_coding		17	1	37046568	1460
ENSMUSG00000020023	protein_coding	Tmcc3	ENSMUST00000121471	protein_coding	alternative1	10	1	94575257	2614
ENSMUSG00000004892	protein_coding	Bcan	ENSMUST00000193276	retained_intron		3	-1	87996365	568
ENSMUSG00000020805	protein_coding	Slc13a5	ENSMUST00000137701	protein_coding		11	-1	72266613	1746
ENSMUSG00000034032	protein_coding	Rpap1	ENSMUST00000048493	protein_coding	principal1	2	-1	119787537	4744
ENSMUSG00000042628	protein_coding	Zfyve1	ENSMUST00000221228	retained_intron		12	-1	83551705	375
ENSMUSG00000112860	antisense	Gm47439	ENSMUST00000218708	antisense		12	1	98259060	1248
ENSMUSG00000004892	protein_coding	Bcan	ENSMUST00000191627	retained_intron		3	-1	87997265	550
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000173564	processed_transcript		17	1	37048578	303
ENSMUSG00000103753	TEC	Gm6934	ENSMUST00000194780	TEC		17	1	51832819	1905
ENSMUSG00000024764	protein_coding	Naa40	ENSMUST00000237834	retained_intron		19	-1	7241054	1569
ENSMUSG00000022842	protein_coding	Ece2	ENSMUST00000231739	retained_intron		16	1	20639206	719
ENSMUSG00000020805	protein_coding	Slc13a5	ENSMUST00000140167	protein_coding		11	-1	72266602	542
ENSMUSG00000004892	protein_coding	Bcan	ENSMUST00000194193	protein_coding		3	-1	87999634	381
ENSMUSG00000042628	protein_coding	Zfyve1	ENSMUST00000222448	protein_coding		12	-1	83562460	678
ENSMUSG00000024764	protein_coding	Naa40	ENSMUST00000235323	retained_intron		19	-1	7241054	4520
ENSMUSG00000086473	processed_pseudogene	Gm16265	ENSMUST00000134558	processed_pseudogene		X	1	12670635	108
ENSMUSG00000102744	TEC	5830444F18Rik	ENSMUST00000194009	TEC		17	-1	51793461	1992
ENSMUSG00000042628	protein_coding	Zfyve1	ENSMUST00000223222	retained_intron		12	-1	83595687	4352
ENSMUSG00000057400	protein_coding	Ces1c	ENSMUST00000212091	retained_intron		8	-1	93131283	1609
ENSMUSG00000070298	protein_coding	Trcg1	ENSMUST00000093837	protein_coding	principal1	9	1	57236556	2701
ENSMUSG00000042628	protein_coding	Zfyve1	ENSMUST00000223380	retained_intron		12	-1	83596822	465
ENSMUSG00000111572	processed_pseudogene	Gm3028	ENSMUST00000213805	processed_pseudogene		9	1	23903900	1119
ENSMUSG00000057400	protein_coding	Ces1c	ENSMUST00000211843	protein_coding		8	-1	93124529	531
ENSMUSG00000102212	TEC	C230085N15Rik	ENSMUST00000194893	TEC		17	-1	51761621	4327
ENSMUSG00000026882	protein_coding	4930568D16Rik	ENSMUST00000028243	protein_coding	principal1	2	-1	35367729	1227
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000172792	protein_coding		17	1	37050631	4036
ENSMUSG00000020023	protein_coding	Tmcc3	ENSMUST00000117929	protein_coding	alternative1	10	1	94576263	3317
ENSMUSG00000020805	protein_coding	Slc13a5	ENSMUST00000207990	retained_intron		11	-1	72267222	2186
ENSMUSG00000110848	lincRNA	Gm47663	ENSMUST00000214658	lincRNA		9	-1	23940342	1137
ENSMUSG00000103779	TEC	Gm36931	ENSMUST00000192997	TEC		17	-1	51771443	4801
ENSMUSG00000117649	processed_pseudogene	Gm9411	ENSMUST00000234612	processed_pseudogene		17	1	91125107	929
ENSMUSG00000108418	TEC	Gm44627	ENSMUST00000206739	TEC		7	1	63948678	1531
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000174347	protein_coding		17	1	37050674	821
ENSMUSG00000111477	processed_pseudogene	Gm47668	ENSMUST00000215011	processed_pseudogene		9	-1	24018159	266
ENSMUSG00000022793	protein_coding	B4galt4	ENSMUST00000232454	protein_coding		16	1	38758399	467
ENSMUSG00000081131	processed_pseudogene	Gm14833	ENSMUST00000118345	processed_pseudogene		X	1	107344586	1027
ENSMUSG00000041220	protein_coding	Elovl6	ENSMUST00000199910	protein_coding	principal1	3	1	129532355	2610
ENSMUSG00000085409	sense_intronic	Gm16155	ENSMUST00000155180	sense_intronic		10	1	94408891	338
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000174866	retained_intron		17	1	37055712	378
ENSMUSG00000111135	processed_pseudogene	Gm47670	ENSMUST00000213615	processed_pseudogene		9	-1	24091902	260
ENSMUSG00000027649	protein_coding	Ctnnbl1	ENSMUST00000029178	protein_coding	principal1	2	1	157737401	2442
ENSMUSG00000024750	protein_coding	Zfand5	ENSMUST00000237651	protein_coding	principal1	19	1	21272278	7385
ENSMUSG00000022793	protein_coding	B4galt4	ENSMUST00000114710	protein_coding		16	1	38760735	837
ENSMUSG00000110710	lincRNA	C78859	ENSMUST00000212800	lincRNA		8	1	94322158	5943
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000174181	retained_intron		17	1	37062984	608
ENSMUSG00000022793	protein_coding	B4galt4	ENSMUST00000114711	protein_coding		16	1	38760735	1481
ENSMUSG00000024462	protein_coding	Gabbr1	ENSMUST00000174071	retained_intron		17	1	37070444	716
ENSMUSG00000027649	protein_coding	Ctnnbl1	ENSMUST00000155479	processed_transcript		2	1	157788415	344
ENSMUSG00000024750	protein_coding	Zfand5	ENSMUST00000149144	nonsense_mediated_decay		19	1	21272687	465
ENSMUSG00000079011	lincRNA	Gm11033	ENSMUST00000137218	lincRNA		8	-1	74833920	406
ENSMUSG00000024750	protein_coding	Zfand5	ENSMUST00000025659	protein_coding	principal1	19	1	21273246	2467
ENSMUSG00000022793	protein_coding	B4galt4	ENSMUST00000114708	protein_coding		16	1	38760805	734
ENSMUSG00000041220	protein_coding	Elovl6	ENSMUST00000197070	protein_coding		3	1	129532367	2275
ENSMUSG00000022793	protein_coding	B4galt4	ENSMUST00000161010	retained_intron		16	1	38762891	665
ENSMUSG00000007950	protein_coding	Abhd8	ENSMUST00000008094	protein_coding	principal1	8	-1	71463655	1978
ENSMUSG00000069184	protein_coding	Zfp72	ENSMUST00000223163	protein_coding	principal1	13	-1	74390836	4153
ENSMUSG00000083183	processed_pseudogene	Gm15575	ENSMUST00000119414	processed_pseudogene		16	-1	38750309	1581
ENSMUSG00000079011	lincRNA	Gm11033	ENSMUST00000156185	lincRNA		8	-1	74833937	2321
ENSMUSG00000049098	protein_coding	Olfr147	ENSMUST00000214648	protein_coding	alternative2	9	1	38401698	5356
ENSMUSG00000027649	protein_coding	Ctnnbl1	ENSMUST00000156300	processed_transcript		2	1	157789864	801
ENSMUSG00000027649	protein_coding	Ctnnbl1	ENSMUST00000129842	processed_transcript		2	1	157789831	374
ENSMUSG00000051237	lincRNA	9230109A22Rik	ENSMUST00000056401	lincRNA		15	-1	25149159	1941
ENSMUSG00000024750	protein_coding	Zfand5	ENSMUST00000141568	retained_intron		19	1	21275980	1582
ENSMUSG00000042215	protein_coding	Bag2	ENSMUST00000044691	protein_coding	principal1	1	-1	33757795	1860
ENSMUSG00000112301	TEC	Gm10752	ENSMUST00000218348	TEC		10	1	115315646	729
ENSMUSG00000007950	protein_coding	Abhd8	ENSMUST00000212321	retained_intron		8	-1	71458907	800
ENSMUSG00000024750	protein_coding	Zfand5	ENSMUST00000133175	retained_intron		19	1	21276040	4260
ENSMUSG00000049098	protein_coding	Olfr147	ENSMUST00000056364	protein_coding	principal2	9	1	38401720	1166
ENSMUSG00000069184	protein_coding	Zfp72	ENSMUST00000091481	protein_coding	principal1	13	-1	74376566	1629
ENSMUSG00000084343	processed_pseudogene	Gm16198	ENSMUST00000118766	processed_pseudogene		3	1	152153447	670
ENSMUSG00000007950	protein_coding	Abhd8	ENSMUST00000212503	retained_intron		8	-1	71463622	2626
ENSMUSG00000034586	protein_coding	Hid1	ENSMUST00000106542	protein_coding	principal3	11	-1	115367756	3276
ENSMUSG00000079011	lincRNA	Gm11033	ENSMUST00000127757	lincRNA		8	-1	74833947	1445
ENSMUSG00000041220	protein_coding	Elovl6	ENSMUST00000071402	protein_coding	principal1	3	1	129532386	5951
ENSMUSG00000113315	processed_pseudogene	Gm8227	ENSMUST00000223306	processed_pseudogene		13	-1	74382199	571
ENSMUSG00000051237	lincRNA	9230109A22Rik	ENSMUST00000228644	lincRNA		15	-1	25238830	1853
ENSMUSG00000042215	protein_coding	Bag2	ENSMUST00000155484	retained_intron		1	-1	33748719	781
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000189676	retained_intron		1	1	118389344	1855
ENSMUSG00000115840	TEC	5830426I08Rik	ENSMUST00000226135	TEC		15	-1	25225854	352
ENSMUSG00000103315	TEC	Gm38341	ENSMUST00000195357	TEC		15	-1	25228031	515
ENSMUSG00000073377	lincRNA	AU016765	ENSMUST00000097295	lincRNA		17	-1	64555622	946
ENSMUSG00000097293	TEC	D630002J18Rik	ENSMUST00000181854	TEC		3	1	152165374	1115
ENSMUSG00000035694	protein_coding	Caps2	ENSMUST00000092176	protein_coding	alternative2	10	1	112163621	2838
ENSMUSG00000042215	protein_coding	Bag2	ENSMUST00000187602	protein_coding		1	-1	33757741	378
ENSMUSG00000073377	lincRNA	AU016765	ENSMUST00000168920	lincRNA		17	-1	64555580	835
ENSMUSG00000105698	antisense	Gm31881	ENSMUST00000199455	antisense		3	1	152106439	559
ENSMUSG00000093758	processed_pseudogene	Gm20701	ENSMUST00000176082	processed_pseudogene		12	1	101866949	347
ENSMUSG00000108313	lincRNA	Gm45052	ENSMUST00000206457	lincRNA		7	1	63962240	405
ENSMUSG00000042215	protein_coding	Bag2	ENSMUST00000189741	retained_intron		1	-1	33757727	955
ENSMUSG00000052058	protein_coding	Olfr901	ENSMUST00000216502	protein_coding	principal1	9	1	38429455	2639
ENSMUSG00000041220	protein_coding	Elovl6	ENSMUST00000197235	protein_coding		3	1	129532727	797
ENSMUSG00000034880	protein_coding	Mrpl34	ENSMUST00000048914	protein_coding	principal1	8	1	71464959	607
ENSMUSG00000103072	TEC	Gm37905	ENSMUST00000195310	TEC		1	1	33748007	341
ENSMUSG00000052058	protein_coding	Olfr901	ENSMUST00000216644	protein_coding	principal1	9	1	38429459	2731
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000131345	antisense		3	-1	107896213	5407
ENSMUSG00000073377	lincRNA	AU016765	ENSMUST00000169472	lincRNA		17	-1	64555660	596
ENSMUSG00000041220	protein_coding	Elovl6	ENSMUST00000198369	protein_coding		3	1	129552380	373
ENSMUSG00000105698	antisense	Gm31881	ENSMUST00000198961	antisense		3	1	152106658	726
ENSMUSG00000030029	protein_coding	Lrig1	ENSMUST00000204645	nonsense_mediated_decay		6	-1	94700158	4849
ENSMUSG00000073377	lincRNA	AU016765	ENSMUST00000168379	lincRNA		17	-1	64555503	577
ENSMUSG00000052058	protein_coding	Olfr901	ENSMUST00000063716	protein_coding	principal1	9	1	38430284	936
ENSMUSG00000112607	lincRNA	Gm33979	ENSMUST00000219486	lincRNA		10	-1	70738844	691
ENSMUSG00000112752	lincRNA	Gm48021	ENSMUST00000218430	lincRNA		10	1	70807242	237
ENSMUSG00000035694	protein_coding	Caps2	ENSMUST00000170013	protein_coding	principal3	10	1	112165676	2321
ENSMUSG00000034586	protein_coding	Hid1	ENSMUST00000044152	protein_coding	alternative1	11	-1	115367719	3236
ENSMUSG00000062846	processed_pseudogene	Gm14176	ENSMUST00000121302	processed_pseudogene		2	1	157901536	477
ENSMUSG00000067591	protein_coding	Klra3	ENSMUST00000111998	protein_coding	principal1	6	-1	130337574	1238
ENSMUSG00000112320	lincRNA	Gm48022	ENSMUST00000218960	lincRNA		10	1	70813845	1431
ENSMUSG00000004356	protein_coding	Utp20	ENSMUST00000004470	protein_coding	principal1	10	-1	88826804	8821
ENSMUSG00000108452	TEC	4930413G21Rik	ENSMUST00000205998	TEC		7	-1	122970050	993
ENSMUSG00000049334	protein_coding	Olfr902	ENSMUST00000213105	protein_coding	principal1	9	1	38447652	2113
ENSMUSG00000112870	lincRNA	Gm40689	ENSMUST00000218006	lincRNA		10	1	70830755	362
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000091387	protein_coding		13	-1	96519160	2382
ENSMUSG00000049334	protein_coding	Olfr902	ENSMUST00000050733	protein_coding	principal1	9	1	38448792	1056
ENSMUSG00000030779	protein_coding	Rbbp6	ENSMUST00000148880	protein_coding		7	1	122965686	478
ENSMUSG00000112883	lincRNA	Gm48023	ENSMUST00000217694	lincRNA		10	1	70847017	464
ENSMUSG00000004356	protein_coding	Utp20	ENSMUST00000218990	retained_intron		10	-1	88747831	914
ENSMUSG00000111032	unprocessed_pseudogene	Olfr1543-ps1	ENSMUST00000217448	unprocessed_pseudogene		9	1	38456452	908
ENSMUSG00000105837	antisense	Gm35986	ENSMUST00000197370	antisense		3	-1	129532109	655
ENSMUSG00000067591	protein_coding	Klra3	ENSMUST00000088017	protein_coding	principal1	6	-1	130337502	984
ENSMUSG00000004356	protein_coding	Utp20	ENSMUST00000220188	protein_coding		10	-1	88765600	784
ENSMUSG00000031584	protein_coding	Gsr	ENSMUST00000033992	protein_coding	principal1	8	1	33653238	2673
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000221899	protein_coding		13	-1	96519160	2319
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000144591	antisense		3	-1	107895766	3845
ENSMUSG00000030029	protein_coding	Lrig1	ENSMUST00000101126	protein_coding	principal1	6	-1	94700137	4951
ENSMUSG00000105837	antisense	Gm35986	ENSMUST00000200419	antisense		3	-1	129532388	421
ENSMUSG00000004356	protein_coding	Utp20	ENSMUST00000218967	protein_coding		10	-1	88765672	657
ENSMUSG00000028488	protein_coding	Sh3gl2	ENSMUST00000030212	protein_coding	principal1	4	1	85205441	2822
ENSMUSG00000034032	protein_coding	Rpap1	ENSMUST00000136419	nonsense_mediated_decay		2	-1	119787500	4546
ENSMUSG00000006221	protein_coding	Hspb7	ENSMUST00000102486	protein_coding	principal1	4	1	141420779	2769
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000089024	protein_coding		17	1	12916329	1902
ENSMUSG00000034586	protein_coding	Hid1	ENSMUST00000145316	processed_transcript		11	-1	115360317	998
ENSMUSG00000083587	processed_pseudogene	Gm14741	ENSMUST00000120777	processed_pseudogene		X	-1	82758438	1009
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000222143	nonsense_mediated_decay		13	-1	96519160	2119
ENSMUSG00000079421	protein_coding	4930402F06Rik	ENSMUST00000113010	protein_coding	principal3	2	-1	35397175	1372
ENSMUSG00000030029	protein_coding	Lrig1	ENSMUST00000203876	processed_transcript		6	-1	94605393	438
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000152663	antisense		3	-1	107895798	2358
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000222075	nonsense_mediated_decay		13	-1	96519160	2027
ENSMUSG00000004356	protein_coding	Utp20	ENSMUST00000219662	nonsense_mediated_decay		10	-1	88782666	729
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000221645	protein_coding	alternative2	13	-1	96519160	1644
ENSMUSG00000035694	protein_coding	Caps2	ENSMUST00000132994	processed_transcript		10	1	112172540	2243
ENSMUSG00000034586	protein_coding	Hid1	ENSMUST00000152977	processed_transcript		11	-1	115359313	349
ENSMUSG00000031584	protein_coding	Gsr	ENSMUST00000149528	processed_transcript		8	1	33669002	718
ENSMUSG00000087168	antisense	Gm15983	ENSMUST00000140000	antisense		16	1	5254786	4814
ENSMUSG00000028488	protein_coding	Sh3gl2	ENSMUST00000107188	protein_coding		4	1	85205126	2286
ENSMUSG00000034032	protein_coding	Rpap1	ENSMUST00000184294	nonsense_mediated_decay		2	-1	119787520	4085
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000220977	nonsense_mediated_decay		13	-1	96519160	2282
ENSMUSG00000004356	protein_coding	Utp20	ENSMUST00000220275	retained_intron		10	-1	88777830	484
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000146337	antisense		3	-1	107895692	1636
ENSMUSG00000034586	protein_coding	Hid1	ENSMUST00000146256	processed_transcript		11	-1	115351003	762
ENSMUSG00000028488	protein_coding	Sh3gl2	ENSMUST00000107189	protein_coding		4	1	85205469	3231
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000222389	protein_coding		13	-1	96519160	1404
ENSMUSG00000034586	protein_coding	Hid1	ENSMUST00000130073	processed_transcript		11	-1	115367609	610
ENSMUSG00000061111	protein_coding	Mcrip1	ENSMUST00000135515	processed_transcript		11	-1	120549701	1256
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000133570	antisense		3	-1	107895773	1976
ENSMUSG00000079421	protein_coding	4930402F06Rik	ENSMUST00000113009	protein_coding	alternative2	2	-1	35397057	1150
ENSMUSG00000028488	protein_coding	Sh3gl2	ENSMUST00000107184	protein_coding		4	1	85205535	671
ENSMUSG00000004356	protein_coding	Utp20	ENSMUST00000220439	retained_intron		10	-1	88826783	670
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000222268	processed_transcript		13	-1	96489791	1671
ENSMUSG00000028488	protein_coding	Sh3gl2	ENSMUST00000133109	protein_coding		4	1	85376341	706
ENSMUSG00000081958	processed_pseudogene	Gm11594	ENSMUST00000122313	processed_pseudogene		11	-1	97322489	162
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000223475	protein_coding		13	-1	96542340	651
ENSMUSG00000021668	protein_coding	Polk	ENSMUST00000222100	retained_intron		13	-1	96542579	1089
ENSMUSG00000034586	protein_coding	Hid1	ENSMUST00000153447	processed_transcript		11	-1	115355373	690
ENSMUSG00000021973	protein_coding	Micu2	ENSMUST00000225961	processed_transcript		14	-1	57919932	1862
ENSMUSG00000044667	protein_coding	Plppr4	ENSMUST00000061071	protein_coding	principal1	3	-1	117360876	5696
ENSMUSG00000030029	protein_coding	Lrig1	ENSMUST00000141014	processed_transcript		6	-1	94680630	666
ENSMUSG00000034586	protein_coding	Hid1	ENSMUST00000123428	protein_coding		11	-1	115367667	818
ENSMUSG00000039131	protein_coding	Gipc2	ENSMUST00000152283	processed_transcript		3	-1	152108522	1268
ENSMUSG00000099773	processed_pseudogene	Hmgb1-rs16	ENSMUST00000185927	processed_pseudogene		9	-1	104169811	613
ENSMUSG00000101085	processed_pseudogene	Gm8531	ENSMUST00000188319	processed_pseudogene		1	-1	55382087	893
ENSMUSG00000070637	protein_coding	Srarp	ENSMUST00000094544	protein_coding	principal1	4	-1	141436105	905
ENSMUSG00000030029	protein_coding	Lrig1	ENSMUST00000150811	processed_transcript		6	-1	94655525	700
ENSMUSG00000104040	TEC	Gm37563	ENSMUST00000192580	TEC		9	1	104262105	1513
ENSMUSG00000092211	unprocessed_pseudogene	Vmn2r-ps67	ENSMUST00000172624	unprocessed_pseudogene		7	-1	85084364	385
ENSMUSG00000022965	protein_coding	Ifngr2	ENSMUST00000023687	protein_coding	principal1	16	1	91547072	3708
ENSMUSG00000101519	processed_pseudogene	Ska2l-ps	ENSMUST00000186208	processed_pseudogene		1	1	150549317	360
ENSMUSG00000030029	protein_coding	Lrig1	ENSMUST00000124165	processed_transcript		6	-1	94678865	587
ENSMUSG00000056959	protein_coding	Olfr315	ENSMUST00000203256	protein_coding	principal1	11	1	58773188	2458
ENSMUSG00000022965	protein_coding	Ifngr2	ENSMUST00000127644	nonsense_mediated_decay		16	1	91547147	534
ENSMUSG00000030029	protein_coding	Lrig1	ENSMUST00000032105	protein_coding	principal1	6	-1	94700145	4831
ENSMUSG00000044667	protein_coding	Plppr4	ENSMUST00000125664	retained_intron		3	-1	117360876	5174
ENSMUSG00000056959	protein_coding	Olfr315	ENSMUST00000081533	protein_coding	principal1	11	1	58778089	998
ENSMUSG00000044667	protein_coding	Plppr4	ENSMUST00000197743	protein_coding		3	-1	117360248	2122
ENSMUSG00000040390	protein_coding	Map3k10	ENSMUST00000036453	protein_coding	principal2	7	-1	27674594	3682
ENSMUSG00000104248	TEC	Gm38152	ENSMUST00000195389	TEC		1	-1	176373720	3566
ENSMUSG00000061111	protein_coding	Mcrip1	ENSMUST00000034913	protein_coding	principal1	11	-1	120549727	1205
ENSMUSG00000022965	protein_coding	Ifngr2	ENSMUST00000130404	processed_transcript		16	1	91561323	2516
ENSMUSG00000040390	protein_coding	Map3k10	ENSMUST00000152032	retained_intron		7	-1	27665107	574
ENSMUSG00000034032	protein_coding	Rpap1	ENSMUST00000139311	retained_intron		2	-1	119787519	4714
ENSMUSG00000104021	lincRNA	Gm36536	ENSMUST00000194241	lincRNA		1	-1	176527273	959
ENSMUSG00000040390	protein_coding	Map3k10	ENSMUST00000133551	retained_intron		7	-1	27674357	712
ENSMUSG00000113340	processed_pseudogene	Gm7695	ENSMUST00000220900	processed_pseudogene		13	-1	63946521	641
ENSMUSG00000034032	protein_coding	Rpap1	ENSMUST00000156506	retained_intron		2	-1	119787514	1385
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000151287	protein_coding	principal1	17	1	12916382	2446
ENSMUSG00000059504	protein_coding	Olfr314	ENSMUST00000205189	protein_coding	principal1	11	1	58782952	2647
ENSMUSG00000034032	protein_coding	Rpap1	ENSMUST00000133146	retained_intron		2	-1	119780202	629
ENSMUSG00000118252	processed_pseudogene	Gm5521	ENSMUST00000235512	processed_pseudogene		19	1	61167249	801
ENSMUSG00000094380	protein_coding	Olfr904	ENSMUST00000216724	protein_coding	principal1	9	1	38463144	5197
ENSMUSG00000040390	protein_coding	Map3k10	ENSMUST00000138243	protein_coding		7	-1	27674581	1621
ENSMUSG00000034032	protein_coding	Rpap1	ENSMUST00000141800	processed_transcript		2	-1	119787529	606
ENSMUSG00000059504	protein_coding	Olfr314	ENSMUST00000076393	protein_coding	principal1	11	1	58786139	1131
ENSMUSG00000094380	protein_coding	Olfr904	ENSMUST00000058153	protein_coding	principal1	9	1	38464043	933
ENSMUSG00000024735	protein_coding	Prpf19	ENSMUST00000178868	processed_transcript		19	1	10898645	1758
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000143961	protein_coding		17	1	12916439	614
ENSMUSG00000094649	protein_coding	Gm7102	ENSMUST00000180168	protein_coding	principal1	19	-1	61176309	1624
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000233286	protein_coding		17	1	12916442	678
ENSMUSG00000040390	protein_coding	Map3k10	ENSMUST00000108341	protein_coding	alternative2	7	-1	27674598	3403
ENSMUSG00000018882	protein_coding	Mrpl45	ENSMUST00000019026	protein_coding	principal1	11	1	97315716	2431
ENSMUSG00000093910	protein_coding	Zfp853	ENSMUST00000212355	protein_coding	principal5	5	-1	143292864	2871
ENSMUSG00000024735	protein_coding	Prpf19	ENSMUST00000191092	retained_intron		19	1	10899369	784
ENSMUSG00000026220	protein_coding	Slc16a14	ENSMUST00000027422	protein_coding	principal1	1	-1	84935134	3207
ENSMUSG00000093910	protein_coding	Zfp853	ENSMUST00000212715	protein_coding	alternative2	5	-1	143293623	3133
ENSMUSG00000067767	protein_coding	Clec4b2	ENSMUST00000088455	protein_coding	principal1	6	1	123172893	1174
ENSMUSG00000096794	protein_coding	Olfr905	ENSMUST00000214377	protein_coding	principal1	9	1	38471107	4429
ENSMUSG00000024735	protein_coding	Prpf19	ENSMUST00000191552	retained_intron		19	1	10900282	260
ENSMUSG00000018882	protein_coding	Mrpl45	ENSMUST00000132168	protein_coding		11	1	97315908	493
ENSMUSG00000093910	protein_coding	Zfp853	ENSMUST00000180336	protein_coding	alternative2	5	-1	143292356	1956
ENSMUSG00000096794	protein_coding	Olfr905	ENSMUST00000051111	protein_coding	principal1	9	1	38472745	937
ENSMUSG00000026220	protein_coding	Slc16a14	ENSMUST00000186980	protein_coding		1	-1	84934857	376
ENSMUSG00000031621	protein_coding	Isx	ENSMUST00000034034	protein_coding	principal3	8	1	74873173	1793
ENSMUSG00000092199	unprocessed_pseudogene	Gm18358	ENSMUST00000173179	unprocessed_pseudogene		7	1	85088768	1277
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000130711	processed_transcript		1	-1	180230065	1170
ENSMUSG00000043659	protein_coding	Npsr1	ENSMUST00000059650	protein_coding	principal1	9	1	24098018	3791
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000190733	nonsense_mediated_decay		1	1	118389446	4474
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000137800	antisense		3	-1	107895809	861
ENSMUSG00000118590	protein_coding	AC167036.1	ENSMUST00000239195	protein_coding	principal1	1	1	84958982	1120
ENSMUSG00000083713	processed_pseudogene	Gm5883	ENSMUST00000120735	processed_pseudogene		6	-1	123219447	495
ENSMUSG00000031621	protein_coding	Isx	ENSMUST00000174427	protein_coding	alternative2	8	1	74873540	1026
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000137970	antisense		3	-1	107895774	795
ENSMUSG00000043659	protein_coding	Npsr1	ENSMUST00000133787	protein_coding		9	1	24097996	649
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000133003	retained_intron		17	1	12916449	908
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000145191	antisense		3	-1	107895783	382
ENSMUSG00000055775	protein_coding	Myh8	ENSMUST00000019625	protein_coding	principal1	11	1	67277124	6149
ENSMUSG00000070337	protein_coding	Gpr179	ENSMUST00000162544	retained_intron		11	-1	97352077	1226
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000189738	protein_coding	alternative2	1	1	118389455	5373
ENSMUSG00000043659	protein_coding	Npsr1	ENSMUST00000154644	protein_coding		9	1	24283433	699
ENSMUSG00000007944	protein_coding	Ttc9b	ENSMUST00000008088	protein_coding	principal1	7	1	27653915	2052
ENSMUSG00000039131	protein_coding	Gipc2	ENSMUST00000046614	protein_coding	principal1	3	-1	152166230	1596
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000163675	antisense		3	-1	107895789	503
ENSMUSG00000043659	protein_coding	Npsr1	ENSMUST00000154337	processed_transcript		9	1	24300334	1559
ENSMUSG00000055775	protein_coding	Myh8	ENSMUST00000108685	protein_coding		11	1	67277418	2306
ENSMUSG00000118342	lincRNA	Gm50255	ENSMUST00000236886	lincRNA		19	-1	21313283	450
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000138472	antisense		3	-1	107895800	483
ENSMUSG00000021973	protein_coding	Micu2	ENSMUST00000022543	protein_coding	principal1	14	-1	57999262	2329
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000187713	protein_coding	alternative2	1	1	118389455	5367
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000135512	antisense		3	-1	107895763	359
ENSMUSG00000024069	protein_coding	Slc30a6	ENSMUST00000024870	protein_coding	principal1	17	1	74395608	2148
ENSMUSG00000086968	antisense	4933431E20Rik	ENSMUST00000154329	antisense		3	-1	107895812	389
ENSMUSG00000085969	antisense	Gm15600	ENSMUST00000153522	antisense		9	-1	24300257	856
ENSMUSG00000111002	TEC	Gm47674	ENSMUST00000214088	TEC		9	-1	24287841	2969
ENSMUSG00000039131	protein_coding	Gipc2	ENSMUST00000128741	processed_transcript		3	-1	152107032	739
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000165223	protein_coding	alternative2	1	1	118389455	7207
ENSMUSG00000070337	protein_coding	Gpr179	ENSMUST00000093942	protein_coding	principal1	11	-1	97352016	9219
ENSMUSG00000021973	protein_coding	Micu2	ENSMUST00000224607	processed_transcript		14	-1	57954194	587
ENSMUSG00000110471	sense_intronic	Gm45823	ENSMUST00000212714	sense_intronic		8	-1	83585525	515
ENSMUSG00000039131	protein_coding	Gipc2	ENSMUST00000130196	processed_transcript		3	-1	152106580	693
ENSMUSG00000107962	TEC	Gm43980	ENSMUST00000204899	TEC		6	1	49254851	1612
ENSMUSG00000078554	protein_coding	Fam229a	ENSMUST00000106043	protein_coding	principal1	4	1	129491190	558
ENSMUSG00000110690	processed_pseudogene	Gm18001	ENSMUST00000212023	processed_pseudogene		8	1	83600013	688
ENSMUSG00000039131	protein_coding	Gipc2	ENSMUST00000152680	retained_intron		3	-1	152102854	513
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000060834	protein_coding	principal1	7	1	30308717	982
ENSMUSG00000110580	antisense	D830024N08Rik	ENSMUST00000212132	antisense		8	1	83576044	2899
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000102553	protein_coding	principal2	4	-1	133968001	1265
ENSMUSG00000021973	protein_coding	Micu2	ENSMUST00000224984	processed_transcript		14	-1	57999198	637
ENSMUSG00000024069	protein_coding	Slc30a6	ENSMUST00000179074	protein_coding		17	1	74395621	1938
ENSMUSG00000039131	protein_coding	Gipc2	ENSMUST00000200501	processed_transcript		3	-1	152146788	755
ENSMUSG00000078554	protein_coding	Fam229a	ENSMUST00000135698	retained_intron		4	1	129491240	587
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000189570	protein_coding	alternative2	1	1	118389456	5502
ENSMUSG00000021973	protein_coding	Micu2	ENSMUST00000225116	processed_transcript		14	-1	57955214	338
ENSMUSG00000039131	protein_coding	Gipc2	ENSMUST00000133672	retained_intron		3	-1	152108336	1064
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000190135	retained_intron		1	1	118389457	3829
ENSMUSG00000024069	protein_coding	Slc30a6	ENSMUST00000233799	protein_coding		17	1	74395629	600
ENSMUSG00000115867	lincRNA	Gm17753	ENSMUST00000229708	lincRNA		15	-1	79025782	1561
ENSMUSG00000055775	protein_coding	Myh8	ENSMUST00000108686	retained_intron		11	1	67277418	3317
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000191445	protein_coding	alternative2	1	1	118389473	4914
ENSMUSG00000039131	protein_coding	Gipc2	ENSMUST00000197813	retained_intron		3	-1	152137770	525
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000105893	protein_coding		4	-1	133967441	973
ENSMUSG00000024069	protein_coding	Slc30a6	ENSMUST00000233042	protein_coding		17	1	74395630	545
ENSMUSG00000115867	lincRNA	Gm17753	ENSMUST00000231015	lincRNA		15	-1	79023529	967
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000129632	retained_intron		17	1	12916449	3419
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000136887	protein_coding		7	1	30308777	730
ENSMUSG00000039131	protein_coding	Gipc2	ENSMUST00000133102	processed_transcript		3	-1	152165750	347
ENSMUSG00000016128	protein_coding	Stard13	ENSMUST00000110483	protein_coding	principal3	5	-1	151190269	5662
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000189262	protein_coding	alternative2	1	1	118389517	6918
ENSMUSG00000024069	protein_coding	Slc30a6	ENSMUST00000235003	nonsense_mediated_decay		17	1	74395645	1507
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000137550	nonsense_mediated_decay		7	1	30308777	822
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000151715	retained_intron		17	1	12916475	578
ENSMUSG00000055775	protein_coding	Myh8	ENSMUST00000139052	retained_intron		11	1	67279991	4999
ENSMUSG00000039427	protein_coding	Alg1	ENSMUST00000100196	protein_coding	principal2	16	1	5233621	1755
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000233345	retained_intron		17	1	12919603	632
ENSMUSG00000043346	processed_pseudogene	Gm6741	ENSMUST00000057074	processed_pseudogene		17	1	91236811	747
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000186349	protein_coding	alternative2	1	1	118419560	7281
ENSMUSG00000023433	protein_coding	Cela3b	ENSMUST00000102522	protein_coding	principal1	4	-1	137430540	926
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000134665	retained_intron		17	1	12919673	618
ENSMUSG00000080758	processed_pseudogene	Gm5392	ENSMUST00000122189	processed_pseudogene		X	-1	107357447	789
ENSMUSG00000039230	protein_coding	Tbcd	ENSMUST00000103013	protein_coding	principal1	11	1	121451949	3906
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000185405	protein_coding	alternative2	1	1	118419724	4597
ENSMUSG00000024069	protein_coding	Slc30a6	ENSMUST00000233157	retained_intron		17	1	74395655	816
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000138709	retained_intron		17	1	12920117	768
ENSMUSG00000024069	protein_coding	Slc30a6	ENSMUST00000232866	nonsense_mediated_decay		17	1	74401912	813
ENSMUSG00000117471	processed_pseudogene	Gm49988	ENSMUST00000233999	processed_pseudogene		17	-1	91347572	473
ENSMUSG00000031101	protein_coding	Sash3	ENSMUST00000033427	protein_coding	principal1	X	1	48146436	2677
ENSMUSG00000068039	protein_coding	Tcp1	ENSMUST00000137289	retained_intron		17	1	12920281	586
ENSMUSG00000023433	protein_coding	Cela3b	ENSMUST00000134565	processed_transcript		4	-1	137422791	976
ENSMUSG00000039427	protein_coding	Alg1	ENSMUST00000153730	retained_intron		16	1	5233638	1246
ENSMUSG00000024537	protein_coding	Psmg2	ENSMUST00000025418	protein_coding	principal1	18	1	67641599	1059
ENSMUSG00000117396	processed_pseudogene	Gm49989	ENSMUST00000234004	processed_pseudogene		17	-1	91536590	316
ENSMUSG00000095664	protein_coding	Vmn2r67	ENSMUST00000233789	nonsense_mediated_decay		7	-1	85155998	11330
ENSMUSG00000024069	protein_coding	Slc30a6	ENSMUST00000233180	retained_intron		17	1	74409826	770
ENSMUSG00000039427	protein_coding	Alg1	ENSMUST00000049207	protein_coding	alternative2	16	1	5233638	1669
ENSMUSG00000095664	protein_coding	Vmn2r67	ENSMUST00000232720	retained_intron		7	-1	85155998	12623
ENSMUSG00000039230	protein_coding	Tbcd	ENSMUST00000106093	protein_coding		11	1	121488321	368
ENSMUSG00000117629	processed_pseudogene	Gm49990	ENSMUST00000234031	processed_pseudogene		17	1	91548119	393
ENSMUSG00000024502	protein_coding	Jakmip2	ENSMUST00000082254	protein_coding	principal1	18	-1	43687773	3512
ENSMUSG00000024537	protein_coding	Psmg2	ENSMUST00000235799	protein_coding		18	1	67641601	1300
ENSMUSG00000005846	protein_coding	Rsl1d1	ENSMUST00000119953	protein_coding	principal1	16	-1	11203331	1945
ENSMUSG00000016128	protein_coding	Stard13	ENSMUST00000062015	protein_coding	alternative2	5	-1	151190194	5526
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000188710	protein_coding	alternative2	1	1	118419724	10265
ENSMUSG00000021188	protein_coding	Trip11	ENSMUST00000021605	protein_coding	principal1	12	-1	101913267	9873
ENSMUSG00000117417	lincRNA	Gm49991	ENSMUST00000234668	lincRNA		17	1	91566104	1172
ENSMUSG00000117417	lincRNA	Gm49991	ENSMUST00000234155	lincRNA		17	1	91566115	1262
ENSMUSG00000029817	protein_coding	Tra2a	ENSMUST00000204189	protein_coding	alternative2	6	-1	49264010	1777
ENSMUSG00000039427	protein_coding	Alg1	ENSMUST00000147530	processed_transcript		16	1	5235170	519
ENSMUSG00000097948	processed_pseudogene	Gm21430	ENSMUST00000182998	processed_pseudogene		14	-1	63429730	998
ENSMUSG00000024537	protein_coding	Psmg2	ENSMUST00000236522	retained_intron		18	1	67641608	795
ENSMUSG00000087425	lincRNA	Gm15404	ENSMUST00000141811	lincRNA		17	1	91557127	364
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000203009	retained_intron		1	1	118459588	860
ENSMUSG00000039962	protein_coding	Olfr906	ENSMUST00000214344	protein_coding	principal1	9	1	38487085	3775
ENSMUSG00000005846	protein_coding	Rsl1d1	ENSMUST00000129962	retained_intron		16	-1	11194995	769
ENSMUSG00000021188	protein_coding	Trip11	ENSMUST00000177183	protein_coding		12	-1	101894316	5076
ENSMUSG00000005846	protein_coding	Rsl1d1	ENSMUST00000230002	protein_coding		16	-1	11203252	715
ENSMUSG00000039962	protein_coding	Olfr906	ENSMUST00000045493	protein_coding	principal1	9	1	38488031	936
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000203646	processed_transcript		1	1	118469771	4042
ENSMUSG00000024502	protein_coding	Jakmip2	ENSMUST00000237288	processed_transcript		18	-1	43546871	704
ENSMUSG00000021188	protein_coding	Trip11	ENSMUST00000177480	nonsense_mediated_decay		12	-1	101883607	744
ENSMUSG00000039427	protein_coding	Alg1	ENSMUST00000142902	retained_intron		16	1	5240074	708
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000204886	processed_transcript		1	1	118469826	546
ENSMUSG00000095664	protein_coding	Vmn2r67	ENSMUST00000168730	protein_coding	principal2	7	-1	85155998	11925
ENSMUSG00000024502	protein_coding	Jakmip2	ENSMUST00000238185	protein_coding		18	-1	43540611	498
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000204552	processed_transcript		1	1	118470587	525
ENSMUSG00000030779	protein_coding	Rbbp6	ENSMUST00000052135	protein_coding	principal2	7	1	122970564	6184
ENSMUSG00000024502	protein_coding	Jakmip2	ENSMUST00000237393	retained_intron		18	-1	43570177	4227
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000204904	nonsense_mediated_decay		1	1	118471772	702
ENSMUSG00000095664	protein_coding	Vmn2r67	ENSMUST00000233734	protein_coding	alternative2	7	-1	85155998	11862
ENSMUSG00000005846	protein_coding	Rsl1d1	ENSMUST00000124454	retained_intron		16	-1	11203264	764
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000145025	retained_intron		4	-1	133967908	2159
ENSMUSG00000024502	protein_coding	Jakmip2	ENSMUST00000235168	retained_intron		18	-1	43574245	3964
ENSMUSG00000020674	protein_coding	Pxdn	ENSMUST00000220271	protein_coding		12	1	29937608	6377
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000191823	protein_coding		1	1	118482039	3916
ENSMUSG00000095664	protein_coding	Vmn2r67	ENSMUST00000233656	nonsense_mediated_decay		7	-1	85155998	11393
ENSMUSG00000024502	protein_coding	Jakmip2	ENSMUST00000237069	retained_intron		18	-1	43687625	483
ENSMUSG00000005846	protein_coding	Rsl1d1	ENSMUST00000230232	nonsense_mediated_decay		16	-1	11203235	415
ENSMUSG00000061589	protein_coding	Dot1l	ENSMUST00000105336	protein_coding	principal1	10	1	80755206	6808
ENSMUSG00000057388	protein_coding	Mrpl18	ENSMUST00000079121	protein_coding	principal1	17	-1	12916345	1219
ENSMUSG00000029817	protein_coding	Tra2a	ENSMUST00000203820	nonsense_mediated_decay		6	-1	49264011	2090
ENSMUSG00000097190	unprocessed_pseudogene	Gm11394	ENSMUST00000181421	unprocessed_pseudogene		13	-1	33729849	517
ENSMUSG00000021188	protein_coding	Trip11	ENSMUST00000177536	protein_coding		12	-1	101913123	1876
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000100472	protein_coding	alternative1	4	-1	133967893	881
ENSMUSG00000090186	unprocessed_pseudogene	Gm7592	ENSMUST00000160674	unprocessed_pseudogene		1	-1	85157699	888
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000189216	retained_intron		1	1	118510237	825
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000205176	protein_coding		1	1	118512717	856
ENSMUSG00000057388	protein_coding	Mrpl18	ENSMUST00000159765	processed_transcript		17	-1	12915624	224
ENSMUSG00000038576	protein_coding	Susd4	ENSMUST00000155229	protein_coding		1	1	182763860	734
ENSMUSG00000021188	protein_coding	Trip11	ENSMUST00000176728	protein_coding		12	-1	101913140	1186
ENSMUSG00000090252	antisense	Gm16028	ENSMUST00000162347	antisense		1	1	85246851	890
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000204325	nonsense_mediated_decay		1	1	118532079	4301
ENSMUSG00000108393	lincRNA	Gm32633	ENSMUST00000205726	lincRNA		7	1	64001885	587
ENSMUSG00000030779	protein_coding	Rbbp6	ENSMUST00000098062	protein_coding		7	1	122970700	6345
ENSMUSG00000118640	protein_coding	AC167036.2	ENSMUST00000239185	protein_coding	principal1	1	-1	85028844	891
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000189384	retained_intron		1	1	118534766	2725
ENSMUSG00000057388	protein_coding	Mrpl18	ENSMUST00000162781	processed_transcript		17	-1	12916103	438
ENSMUSG00000021188	protein_coding	Trip11	ENSMUST00000085086	processed_transcript		12	-1	101913155	743
ENSMUSG00000108393	lincRNA	Gm32633	ENSMUST00000206557	lincRNA		7	1	64007769	461
ENSMUSG00000073631	antisense	Gm10553	ENSMUST00000238757	antisense		1	1	85099512	1563
ENSMUSG00000057388	protein_coding	Mrpl18	ENSMUST00000162928	processed_transcript		17	-1	12916202	278
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000102552	protein_coding	principal2	4	-1	133968650	676
ENSMUSG00000073631	antisense	Gm10553	ENSMUST00000097669	antisense		1	1	85100164	372
ENSMUSG00000025129	protein_coding	Ppp1r27	ENSMUST00000026121	protein_coding	principal1	11	-1	120551132	771
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000188441	retained_intron		1	1	118547211	514
ENSMUSG00000089976	unprocessed_pseudogene	Gm2389	ENSMUST00000160487	unprocessed_pseudogene		1	1	85061154	189
ENSMUSG00000093579	processed_transcript	Gm20036	ENSMUST00000177547	processed_transcript		12	1	101913240	844
ENSMUSG00000030779	protein_coding	Rbbp6	ENSMUST00000231323	protein_coding		7	1	122970909	5331
ENSMUSG00000029817	protein_coding	Tra2a	ENSMUST00000031841	protein_coding	principal3	6	-1	49264030	1799
ENSMUSG00000042184	protein_coding	1700069L16Rik	ENSMUST00000162388	protein_coding	alternative2	5	-1	113724772	706
ENSMUSG00000057388	protein_coding	Mrpl18	ENSMUST00000162978	retained_intron		17	-1	12916069	446
ENSMUSG00000093437	processed_pseudogene	Gm20702	ENSMUST00000176181	processed_pseudogene		12	1	101906080	460
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000170164	protein_coding		10	1	127380327	407
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000192387	protein_coding		1	1	118547977	1034
ENSMUSG00000061852	unprocessed_pseudogene	Gm7582	ENSMUST00000160831	unprocessed_pseudogene		1	-1	85041958	331
ENSMUSG00000016128	protein_coding	Stard13	ENSMUST00000202111	protein_coding		5	-1	151127543	3373
ENSMUSG00000030779	protein_coding	Rbbp6	ENSMUST00000071590	protein_coding	alternative2	7	1	122970918	5728
ENSMUSG00000112439	lincRNA	Gm33336	ENSMUST00000219656	lincRNA		10	-1	95632239	1676
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000203870	retained_intron		1	1	118554234	2090
ENSMUSG00000042184	protein_coding	1700069L16Rik	ENSMUST00000159233	processed_transcript		5	-1	113704448	613
ENSMUSG00000029817	protein_coding	Tra2a	ENSMUST00000204818	retained_intron		6	-1	49264033	3040
ENSMUSG00000104275	lincRNA	Gm37867	ENSMUST00000192066	lincRNA		3	-1	28854257	1059
ENSMUSG00000016128	protein_coding	Stard13	ENSMUST00000201680	processed_transcript		5	-1	151190200	644
ENSMUSG00000030779	protein_coding	Rbbp6	ENSMUST00000137860	retained_intron		7	1	122975640	582
ENSMUSG00000040600	protein_coding	Eps8l3	ENSMUST00000037375	protein_coding	principal1	3	1	107877229	2271
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000187575	retained_intron		1	1	118604727	4706
ENSMUSG00000032300	protein_coding	1700017B05Rik	ENSMUST00000034846	protein_coding	principal2	9	-1	57262612	4152
ENSMUSG00000029817	protein_coding	Tra2a	ENSMUST00000204013	retained_intron		6	-1	49264030	3788
ENSMUSG00000061589	protein_coding	Dot1l	ENSMUST00000127740	nonsense_mediated_decay		10	1	80755208	4600
ENSMUSG00000062382	protein_coding	Ftl1-ps1	ENSMUST00000221435	protein_coding		13	1	74399694	491
ENSMUSG00000102482	TEC	Gm37924	ENSMUST00000195470	TEC		3	1	28879812	3647
ENSMUSG00000094810	protein_coding	Olfr907	ENSMUST00000214003	protein_coding	principal1	9	1	38495801	1235
ENSMUSG00000107916	processed_pseudogene	Gm18011	ENSMUST00000203717	processed_pseudogene		6	1	49286721	565
ENSMUSG00000042184	protein_coding	1700069L16Rik	ENSMUST00000047891	protein_coding	principal5	5	-1	113724749	537
ENSMUSG00000030779	protein_coding	Rbbp6	ENSMUST00000206179	retained_intron		7	1	122975858	809
ENSMUSG00000016128	protein_coding	Stard13	ENSMUST00000202385	processed_transcript		5	-1	151089262	251
ENSMUSG00000061589	protein_coding	Dot1l	ENSMUST00000147579	retained_intron		10	1	80755463	531
ENSMUSG00000094810	protein_coding	Olfr907	ENSMUST00000214264	protein_coding	principal1	9	1	38495810	1910
ENSMUSG00000040600	protein_coding	Eps8l3	ENSMUST00000200198	processed_transcript		3	1	107877244	337
ENSMUSG00000016128	protein_coding	Stard13	ENSMUST00000129088	protein_coding		5	-1	151233774	449
ENSMUSG00000032300	protein_coding	1700017B05Rik	ENSMUST00000215298	protein_coding	alternative2	9	-1	57262547	1023
ENSMUSG00000016128	protein_coding	Stard13	ENSMUST00000141117	processed_transcript		5	-1	151095747	442
ENSMUSG00000061589	protein_coding	Dot1l	ENSMUST00000150338	protein_coding		10	1	80777556	4529
ENSMUSG00000030779	protein_coding	Rbbp6	ENSMUST00000156738	retained_intron		7	1	122982542	698
ENSMUSG00000094810	protein_coding	Olfr907	ENSMUST00000052901	protein_coding	principal1	9	1	38498671	933
ENSMUSG00000018412	protein_coding	Kansl1	ENSMUST00000018556	protein_coding	principal2	11	-1	104468861	5061
ENSMUSG00000061589	protein_coding	Dot1l	ENSMUST00000163526	retained_intron		10	1	80785164	790
ENSMUSG00000032300	protein_coding	1700017B05Rik	ENSMUST00000214583	processed_transcript		9	-1	57262599	625
ENSMUSG00000030779	protein_coding	Rbbp6	ENSMUST00000126053	retained_intron		7	1	122990130	542
ENSMUSG00000016128	protein_coding	Stard13	ENSMUST00000146814	retained_intron		5	-1	151190150	2480
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000132193	retained_intron		7	1	30308788	1112
ENSMUSG00000062382	protein_coding	Ftl1-ps1	ENSMUST00000222435	protein_coding	principal1	13	1	74406409	938
ENSMUSG00000030779	protein_coding	Rbbp6	ENSMUST00000205495	protein_coding		7	1	123000279	2276
ENSMUSG00000032300	protein_coding	1700017B05Rik	ENSMUST00000213199	protein_coding	alternative2	9	-1	57262601	3722
ENSMUSG00000087475	lincRNA	4933406I18Rik	ENSMUST00000163996	lincRNA		7	-1	114415161	904
ENSMUSG00000040600	protein_coding	Eps8l3	ENSMUST00000199990	protein_coding		3	1	107877262	378
ENSMUSG00000061589	protein_coding	Dot1l	ENSMUST00000149394	nonsense_mediated_decay		10	1	80789063	2820
ENSMUSG00000001227	protein_coding	Sema6b	ENSMUST00000001256	protein_coding	principal1	17	-1	56140343	3736
ENSMUSG00000016128	protein_coding	Stard13	ENSMUST00000126770	protein_coding		5	-1	151233836	457
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000144951	retained_intron		7	1	30308795	479
ENSMUSG00000108551	sense_intronic	Gm20274	ENSMUST00000206967	sense_intronic		7	1	122995348	584
ENSMUSG00000032300	protein_coding	1700017B05Rik	ENSMUST00000215426	processed_transcript		9	-1	57262597	418
ENSMUSG00000113311	antisense	Gm47428	ENSMUST00000222047	antisense		13	-1	74406737	661
ENSMUSG00000018412	protein_coding	Kansl1	ENSMUST00000106972	protein_coding	alternative2	11	-1	104442291	5427
ENSMUSG00000016128	protein_coding	Stard13	ENSMUST00000202866	processed_transcript		5	-1	151108735	243
ENSMUSG00000061589	protein_coding	Dot1l	ENSMUST00000138505	protein_coding		10	1	80791454	1784
ENSMUSG00000095492	processed_pseudogene	Gm14361	ENSMUST00000178547	processed_pseudogene		X	1	3696491	868
ENSMUSG00000032300	protein_coding	1700017B05Rik	ENSMUST00000217657	protein_coding		9	-1	57261509	656
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000049404	protein_coding	alternative2	1	1	118389058	7797
ENSMUSG00000039230	protein_coding	Tbcd	ENSMUST00000139414	processed_transcript		11	1	121601619	1292
ENSMUSG00000018412	protein_coding	Kansl1	ENSMUST00000106971	protein_coding	alternative2	11	-1	104441702	5222
ENSMUSG00000079737	protein_coding	3110001I22Rik	ENSMUST00000225585	processed_transcript		16	1	13671929	1705
ENSMUSG00000079737	protein_coding	3110001I22Rik	ENSMUST00000223666	transcribed_processed_pseudogene		16	1	13677039	939
ENSMUSG00000087475	lincRNA	4933406I18Rik	ENSMUST00000124673	lincRNA		7	-1	114415021	905
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000135319	retained_intron		7	1	30308809	1181
ENSMUSG00000039230	protein_coding	Tbcd	ENSMUST00000151666	processed_transcript		11	1	121601705	1324
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000178710	protein_coding	alternative2	1	1	118389058	7566
ENSMUSG00000056600	protein_coding	Olfr90	ENSMUST00000217397	protein_coding	principal1	17	-1	37088485	2680
ENSMUSG00000001227	protein_coding	Sema6b	ENSMUST00000167545	protein_coding	principal1	17	-1	56133843	3156
ENSMUSG00000039230	protein_coding	Tbcd	ENSMUST00000155666	retained_intron		11	1	121598316	4832
ENSMUSG00000018412	protein_coding	Kansl1	ENSMUST00000134266	protein_coding		11	-1	104467991	755
ENSMUSG00000112538	lincRNA	Gm47667	ENSMUST00000218479	lincRNA		10	1	95634483	661
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000139121	processed_transcript		7	1	30308813	427
ENSMUSG00000079737	protein_coding	3110001I22Rik	ENSMUST00000035426	protein_coding	principal1	16	1	13672020	1611
ENSMUSG00000056600	protein_coding	Olfr90	ENSMUST00000215195	protein_coding	principal1	17	-1	37088499	3060
ENSMUSG00000056600	protein_coding	Olfr90	ENSMUST00000215502	processed_transcript		17	-1	37088499	2883
ENSMUSG00000056600	protein_coding	Olfr90	ENSMUST00000216488	protein_coding	principal1	17	-1	37088499	3188
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000143369	retained_intron		7	1	30308854	750
ENSMUSG00000079455	transcribed_unprocessed_pseudogene	Gm16026	ENSMUST00000163068	transcribed_unprocessed_pseudogene		1	1	85266698	2741
ENSMUSG00000064302	protein_coding	Clasp1	ENSMUST00000070989	protein_coding	alternative2	1	1	118389058	7767
ENSMUSG00000074780	protein_coding	Anapc15-ps	ENSMUST00000218771	protein_coding	principal5	10	-1	95673389	399
ENSMUSG00000074780	protein_coding	Anapc15-ps	ENSMUST00000099328	protein_coding	alternative2	10	-1	95673451	426
ENSMUSG00000102145	TEC	Gm38056	ENSMUST00000193928	TEC		1	1	55440904	5027
ENSMUSG00000056600	protein_coding	Olfr90	ENSMUST00000207101	protein_coding		17	-1	37088451	592
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000137870	retained_intron		7	1	30309771	770
ENSMUSG00000112025	processed_pseudogene	Gm47669	ENSMUST00000218734	processed_pseudogene		10	-1	95703462	412
ENSMUSG00000029153	protein_coding	Ociad2	ENSMUST00000200830	protein_coding		5	-1	73338948	2384
ENSMUSG00000103471	processed_pseudogene	Gm17966	ENSMUST00000193453	processed_pseudogene		1	-1	176642558	594
ENSMUSG00000094876	protein_coding	Btbd35f18	ENSMUST00000105019	protein_coding	principal1	X	1	3700233	1960
ENSMUSG00000079455	transcribed_unprocessed_pseudogene	Gm16026	ENSMUST00000162652	transcribed_unprocessed_pseudogene		1	1	85266701	683
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000148858	retained_intron		7	1	30311127	901
ENSMUSG00000056600	protein_coding	Olfr90	ENSMUST00000070808	protein_coding	principal1	17	-1	37086236	1046
ENSMUSG00000100309	processed_pseudogene	Gm6644	ENSMUST00000186507	processed_pseudogene		1	-1	55445024	951
ENSMUSG00000018412	protein_coding	Kansl1	ENSMUST00000069188	processed_transcript		11	-1	104341299	926
ENSMUSG00000079455	transcribed_unprocessed_pseudogene	Gm16026	ENSMUST00000162923	transcribed_unprocessed_pseudogene		1	1	85266714	641
ENSMUSG00000106056	lincRNA	4930500L23Rik	ENSMUST00000198000	lincRNA		5	1	139523749	747
ENSMUSG00000102831	TEC	Gm37382	ENSMUST00000193032	TEC		1	1	55559460	1596
ENSMUSG00000042831	protein_coding	Alkbh6	ENSMUST00000135882	processed_transcript		7	1	30312675	545
ENSMUSG00000079455	transcribed_unprocessed_pseudogene	Gm16026	ENSMUST00000159849	transcribed_unprocessed_pseudogene		1	1	85272359	828
ENSMUSG00000018412	protein_coding	Kansl1	ENSMUST00000106977	protein_coding	principal2	11	-1	104442291	5510
ENSMUSG00000079455	transcribed_unprocessed_pseudogene	Gm16026	ENSMUST00000094774	transcribed_unprocessed_pseudogene		1	1	85272359	580
ENSMUSG00000020674	protein_coding	Pxdn	ENSMUST00000122328	protein_coding	principal1	12	1	29938036	6614
ENSMUSG00000044469	protein_coding	Tnfaip8l1	ENSMUST00000233649	retained_intron		17	1	56162477	4007
ENSMUSG00000079455	transcribed_unprocessed_pseudogene	Gm16026	ENSMUST00000159695	transcribed_unprocessed_pseudogene		1	1	85275107	772
ENSMUSG00000089872	protein_coding	Rps6kc1	ENSMUST00000159624	nonsense_mediated_decay		1	-1	190911747	3276
ENSMUSG00000020674	protein_coding	Pxdn	ENSMUST00000118321	protein_coding		12	1	29938050	2698
ENSMUSG00000022544	protein_coding	Eef2kmt	ENSMUST00000064635	protein_coding	principal1	16	-1	5255983	2170
ENSMUSG00000020674	protein_coding	Pxdn	ENSMUST00000155318	retained_intron		12	1	29938050	3406
ENSMUSG00000044469	protein_coding	Tnfaip8l1	ENSMUST00000077788	protein_coding	principal1	17	1	56162477	2379
ENSMUSG00000089872	protein_coding	Rps6kc1	ENSMUST00000160889	nonsense_mediated_decay		1	-1	190834036	2694
ENSMUSG00000039230	protein_coding	Tbcd	ENSMUST00000147560	processed_transcript		11	1	121544201	699
ENSMUSG00000030057	protein_coding	Cnbp	ENSMUST00000204653	protein_coding	alternative1	6	-1	87851106	2175
ENSMUSG00000053460	protein_coding	Ggcx	ENSMUST00000065906	protein_coding	principal1	6	1	72414308	2929
ENSMUSG00000038576	protein_coding	Susd4	ENSMUST00000153348	protein_coding	principal1	1	1	182764012	1898
ENSMUSG00000026021	protein_coding	Sumo1	ENSMUST00000191158	processed_transcript		1	-1	59670792	528
ENSMUSG00000039230	protein_coding	Tbcd	ENSMUST00000147470	retained_intron		11	1	121550111	716
ENSMUSG00000020674	protein_coding	Pxdn	ENSMUST00000155190	processed_transcript		12	1	29996438	1024
ENSMUSG00000029546	protein_coding	Uncx	ENSMUST00000172997	protein_coding	principal1	5	1	139543494	2498
ENSMUSG00000038576	protein_coding	Susd4	ENSMUST00000193660	protein_coding		1	1	182764395	559
ENSMUSG00000038349	protein_coding	Plcl1	ENSMUST00000042986	protein_coding	principal1	1	1	55405921	6580
ENSMUSG00000039230	protein_coding	Tbcd	ENSMUST00000125167	nonsense_mediated_decay		11	1	121500036	944
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000138458	processed_transcript		4	-1	133968650	544
ENSMUSG00000038576	protein_coding	Susd4	ENSMUST00000194981	protein_coding		1	1	182764556	554
ENSMUSG00000020674	protein_coding	Pxdn	ENSMUST00000126233	retained_intron		12	1	29996444	768
ENSMUSG00000033589	protein_coding	Reep4	ENSMUST00000226563	protein_coding		14	1	70545251	1444
ENSMUSG00000029546	protein_coding	Uncx	ENSMUST00000174792	protein_coding		5	1	139543898	1196
ENSMUSG00000020674	protein_coding	Pxdn	ENSMUST00000137316	retained_intron		12	1	29999815	787
ENSMUSG00000053460	protein_coding	Ggcx	ENSMUST00000205738	nonsense_mediated_decay		6	1	72414341	1099
ENSMUSG00000010066	protein_coding	Cacna2d2	ENSMUST00000010210	protein_coding	alternative2	9	1	107399612	5783
ENSMUSG00000035314	protein_coding	Gdpd5	ENSMUST00000037528	protein_coding	principal2	7	1	99381414	4611
ENSMUSG00000093503	unprocessed_pseudogene	Vmn2r-ps4	ENSMUST00000176989	unprocessed_pseudogene		3	1	64328660	1015
ENSMUSG00000085799	processed_pseudogene	Gm6963	ENSMUST00000147879	processed_pseudogene		10	-1	39424996	379
ENSMUSG00000085958	antisense	A930019D19Rik	ENSMUST00000135360	antisense		2	1	146259286	958
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000137456	processed_transcript		4	-1	133967275	630
ENSMUSG00000042938	processed_pseudogene	Gm14117	ENSMUST00000122417	processed_pseudogene		2	1	146305547	843
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000125266	processed_transcript		4	-1	133967251	503
ENSMUSG00000035314	protein_coding	Gdpd5	ENSMUST00000207617	protein_coding		7	1	99385898	412
ENSMUSG00000029153	protein_coding	Ociad2	ENSMUST00000087195	protein_coding	principal1	5	-1	73338992	2554
ENSMUSG00000038349	protein_coding	Plcl1	ENSMUST00000187059	processed_transcript		1	1	55702025	402
ENSMUSG00000030057	protein_coding	Cnbp	ENSMUST00000204890	protein_coding	alternative1	6	-1	87851030	1614
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000123234	protein_coding		4	-1	133967243	432
ENSMUSG00000035314	protein_coding	Gdpd5	ENSMUST00000207530	protein_coding		7	1	99387010	369
ENSMUSG00000027712	protein_coding	Anxa5	ENSMUST00000029266	protein_coding	principal1	3	-1	36475894	1731
ENSMUSG00000022544	protein_coding	Eef2kmt	ENSMUST00000132225	retained_intron		16	-1	5255941	1490
ENSMUSG00000020674	protein_coding	Pxdn	ENSMUST00000218620	retained_intron		12	1	29999964	4578
ENSMUSG00000033589	protein_coding	Reep4	ENSMUST00000047218	protein_coding	principal1	14	1	70545354	1565
ENSMUSG00000035314	protein_coding	Gdpd5	ENSMUST00000208800	protein_coding		7	1	99414650	446
ENSMUSG00000053460	protein_coding	Ggcx	ENSMUST00000207012	nonsense_mediated_decay		6	1	72417855	2014
ENSMUSG00000038576	protein_coding	Susd4	ENSMUST00000085724	protein_coding	principal1	1	1	182764895	2983
ENSMUSG00000035314	protein_coding	Gdpd5	ENSMUST00000213887	protein_coding	alternative1	7	1	99424113	2711
ENSMUSG00000086336	antisense	Gm12979	ENSMUST00000145488	antisense		4	-1	129509746	405
ENSMUSG00000027712	protein_coding	Anxa5	ENSMUST00000196097	retained_intron		3	-1	36452328	567
ENSMUSG00000092259	unprocessed_pseudogene	Vmn2r-ps68	ENSMUST00000173880	unprocessed_pseudogene		7	1	85192197	861
ENSMUSG00000074655	protein_coding	Gm1527	ENSMUST00000099170	protein_coding	principal1	3	1	28892617	2120
ENSMUSG00000072109	antisense	A530040E14Rik	ENSMUST00000162353	antisense		1	1	85105946	2017
ENSMUSG00000022544	protein_coding	Eef2kmt	ENSMUST00000139584	protein_coding		16	-1	5255956	987
ENSMUSG00000053460	protein_coding	Ggcx	ENSMUST00000132995	nonsense_mediated_decay		6	1	72417906	775
ENSMUSG00000029153	protein_coding	Ociad2	ENSMUST00000201908	protein_coding		5	-1	73338948	2378
ENSMUSG00000027712	protein_coding	Anxa5	ENSMUST00000199478	protein_coding		3	-1	36475659	527
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000112142	protein_coding	alternative1	2	1	71211706	2585
ENSMUSG00000035314	protein_coding	Gdpd5	ENSMUST00000207238	retained_intron		7	1	99441920	396
ENSMUSG00000053460	protein_coding	Ggcx	ENSMUST00000207000	nonsense_mediated_decay		6	1	72426617	569
ENSMUSG00000022544	protein_coding	Eef2kmt	ENSMUST00000129729	retained_intron		16	-1	5248870	519
ENSMUSG00000035314	protein_coding	Gdpd5	ENSMUST00000208947	retained_intron		7	1	99446877	1865
ENSMUSG00000039238	protein_coding	Zfp750	ENSMUST00000092298	protein_coding	principal1	11	-1	121519333	3232
ENSMUSG00000033589	protein_coding	Reep4	ENSMUST00000226556	retained_intron		14	1	70545679	820
ENSMUSG00000033589	protein_coding	Reep4	ENSMUST00000228444	retained_intron		14	1	70546181	402
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000112139	protein_coding	alternative1	2	1	71211741	2483
ENSMUSG00000072109	antisense	A530040E14Rik	ENSMUST00000093501	antisense		1	1	85106634	1515
ENSMUSG00000112519	lincRNA	Gm47671	ENSMUST00000217814	lincRNA		10	-1	95717507	706
ENSMUSG00000072109	antisense	A530040E14Rik	ENSMUST00000162453	antisense		1	1	85106644	827
ENSMUSG00000029153	protein_coding	Ociad2	ENSMUST00000200776	protein_coding		5	-1	73338951	2359
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000130809	retained_intron		4	-1	133967909	711
ENSMUSG00000112289	lincRNA	1110019B22Rik	ENSMUST00000218396	lincRNA		10	-1	95722489	989
ENSMUSG00000030057	protein_coding	Cnbp	ENSMUST00000113619	protein_coding	alternative1	6	-1	87851080	1661
ENSMUSG00000033589	protein_coding	Reep4	ENSMUST00000227013	retained_intron		14	1	70547521	799
ENSMUSG00000022544	protein_coding	Eef2kmt	ENSMUST00000230238	processed_transcript		16	-1	5255932	604
ENSMUSG00000072109	antisense	A530040E14Rik	ENSMUST00000161666	antisense		1	1	85106652	711
ENSMUSG00000018446	protein_coding	C1qbp	ENSMUST00000078528	protein_coding	principal1	11	-1	70983026	1175
ENSMUSG00000106289	TR_V_gene	Trav23	ENSMUST00000199137	TR_V_gene	principal1	14	1	53977153	347
ENSMUSG00000089872	protein_coding	Rps6kc1	ENSMUST00000159367	nonsense_mediated_decay		1	-1	190911738	4103
ENSMUSG00000029153	protein_coding	Ociad2	ENSMUST00000202012	protein_coding		5	-1	73338558	876
ENSMUSG00000112289	lincRNA	1110019B22Rik	ENSMUST00000217833	lincRNA		10	-1	95722500	535
ENSMUSG00000096210	protein_coding	H1f0	ENSMUST00000180086	protein_coding	principal1	15	1	79028450	2055
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000136327	protein_coding		4	-1	133967894	772
ENSMUSG00000035314	protein_coding	Gdpd5	ENSMUST00000208061	retained_intron		7	1	99448842	938
ENSMUSG00000033589	protein_coding	Reep4	ENSMUST00000226592	retained_intron		14	1	70547582	365
ENSMUSG00000072109	antisense	A530040E14Rik	ENSMUST00000159087	antisense		1	1	85106654	1248
ENSMUSG00000112188	lincRNA	Gm47708	ENSMUST00000218485	lincRNA		10	1	95730183	632
ENSMUSG00000105823	TR_V_pseudogene	Trdv3	ENSMUST00000198551	TR_V_pseudogene		14	1	54000959	309
ENSMUSG00000112188	lincRNA	Gm47708	ENSMUST00000219583	lincRNA		10	1	95731227	670
ENSMUSG00000030057	protein_coding	Cnbp	ENSMUST00000113617	protein_coding	alternative1	6	-1	87851060	952
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000153622	retained_intron		4	-1	133967891	681
ENSMUSG00000029153	protein_coding	Ociad2	ENSMUST00000200821	protein_coding		5	-1	73341028	491
ENSMUSG00000072109	antisense	A530040E14Rik	ENSMUST00000161150	antisense		1	1	85111812	1262
ENSMUSG00000081412	processed_pseudogene	Gm15403	ENSMUST00000119343	processed_pseudogene		17	1	91667079	1227
ENSMUSG00000053334	protein_coding	Ficd	ENSMUST00000065698	protein_coding	principal1	5	1	113735803	3133
ENSMUSG00000022544	protein_coding	Eef2kmt	ENSMUST00000140718	retained_intron		16	-1	5255929	695
ENSMUSG00000090128	unprocessed_pseudogene	Gm16038	ENSMUST00000159317	unprocessed_pseudogene		1	1	85115319	193
ENSMUSG00000026021	protein_coding	Sumo1	ENSMUST00000091374	protein_coding	principal1	1	-1	59670834	1215
ENSMUSG00000117555	processed_pseudogene	Gm49992	ENSMUST00000234681	processed_pseudogene		17	-1	91782437	545
ENSMUSG00000018446	protein_coding	C1qbp	ENSMUST00000155371	retained_intron		11	-1	70978871	703
ENSMUSG00000086942	antisense	Gm15489	ENSMUST00000132811	antisense		7	-1	122159401	973
ENSMUSG00000018446	protein_coding	C1qbp	ENSMUST00000179291	retained_intron		11	-1	70983007	1998
ENSMUSG00000099693	unprocessed_pseudogene	Gm29284	ENSMUST00000188363	unprocessed_pseudogene		1	-1	84993032	255
ENSMUSG00000003038	protein_coding	Hmgn2	ENSMUST00000136859	retained_intron		4	-1	133967861	927
ENSMUSG00000116262	antisense	Gm49544	ENSMUST00000230293	antisense		15	-1	79028612	2157
ENSMUSG00000117408	processed_pseudogene	Gm49993	ENSMUST00000234065	processed_pseudogene		17	-1	91783133	482
ENSMUSG00000026021	protein_coding	Sumo1	ENSMUST00000185265	protein_coding		1	-1	59670739	532
ENSMUSG00000097303	bidirectional_promoter_lncRNA	3110083C13Rik	ENSMUST00000180534	bidirectional_promoter_lncRNA		14	1	57999323	858
ENSMUSG00000030057	protein_coding	Cnbp	ENSMUST00000141961	retained_intron		6	-1	87851027	915
ENSMUSG00000026021	protein_coding	Sumo1	ENSMUST00000123857	retained_intron		1	-1	59670834	829
ENSMUSG00000096861	protein_coding	Vmn2r68	ENSMUST00000232921	retained_intron		7	-1	85237783	4066
ENSMUSG00000101279	unprocessed_pseudogene	Gm18342	ENSMUST00000186987	unprocessed_pseudogene		1	-1	85080236	694
ENSMUSG00000112998	TEC	Gm47656	ENSMUST00000221477	TEC		13	1	70061558	2365
ENSMUSG00000096861	protein_coding	Vmn2r68	ENSMUST00000233062	retained_intron		7	-1	85237783	3687
ENSMUSG00000097303	bidirectional_promoter_lncRNA	3110083C13Rik	ENSMUST00000224786	bidirectional_promoter_lncRNA		14	1	57999384	907
ENSMUSG00000113980	processed_pseudogene	Gm47655	ENSMUST00000221449	processed_pseudogene		13	-1	70007614	384
ENSMUSG00000117433	lincRNA	Gm41654	ENSMUST00000234442	lincRNA		17	-1	91872139	806
ENSMUSG00000117433	lincRNA	Gm41654	ENSMUST00000234041	lincRNA		17	-1	91872139	900
ENSMUSG00000117433	lincRNA	Gm41654	ENSMUST00000234556	lincRNA		17	-1	91872139	1002
ENSMUSG00000114918	processed_pseudogene	Gm9012	ENSMUST00000224236	processed_pseudogene		14	-1	58049823	595
ENSMUSG00000004110	protein_coding	Cacna1e	ENSMUST00000187541	protein_coding	principal2	1	-1	154726356	14921
ENSMUSG00000030057	protein_coding	Cnbp	ENSMUST00000204596	retained_intron		6	-1	87851022	911
ENSMUSG00000113074	lincRNA	Gm3772	ENSMUST00000221404	lincRNA		13	1	70021959	1887
ENSMUSG00000111457	processed_pseudogene	Gm18996	ENSMUST00000214851	processed_pseudogene		9	-1	57329415	755
ENSMUSG00000101409	antisense	1700122D07Rik	ENSMUST00000186973	antisense		1	-1	59537229	421
ENSMUSG00000102291	TEC	Gm37542	ENSMUST00000192563	TEC		1	1	182907710	2832
ENSMUSG00000025508	protein_coding	Rplp2	ENSMUST00000084434	protein_coding	principal1	7	1	141447370	964
ENSMUSG00000103821	TEC	D430013B06Rik	ENSMUST00000192922	TEC		1	-1	59648071	1872
ENSMUSG00000004110	protein_coding	Cacna1e	ENSMUST00000211821	protein_coding	alternative2	1	-1	154864067	6765
ENSMUSG00000066626	processed_pseudogene	Gm5121	ENSMUST00000085711	processed_pseudogene		9	1	57334128	627
ENSMUSG00000000791	protein_coding	Il12rb1	ENSMUST00000211936	retained_intron		8	1	70808449	1704
ENSMUSG00000076867	TR_V_gene	Trdv4	ENSMUST00000103679	TR_V_gene	principal1	14	1	54074905	444
ENSMUSG00000004110	protein_coding	Cacna1e	ENSMUST00000226546	protein_coding		1	-1	154421155	331
ENSMUSG00000117584	processed_pseudogene	Gm49994	ENSMUST00000234894	processed_pseudogene		17	1	92181065	334
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000112140	protein_coding	alternative1	2	1	71211741	2573
ENSMUSG00000096861	protein_coding	Vmn2r68	ENSMUST00000061074	protein_coding	principal1	7	-1	85237783	3015
ENSMUSG00000025508	protein_coding	Rplp2	ENSMUST00000140099	retained_intron		7	1	141447631	786
ENSMUSG00000084067	processed_pseudogene	Gm14269	ENSMUST00000120455	processed_pseudogene		2	-1	170463819	306
ENSMUSG00000004110	protein_coding	Cacna1e	ENSMUST00000188384	retained_intron		1	-1	154476696	5001
ENSMUSG00000030057	protein_coding	Cnbp	ENSMUST00000134851	retained_intron		6	-1	87851059	985
ENSMUSG00000025508	protein_coding	Rplp2	ENSMUST00000137307	retained_intron		7	1	141447669	465
ENSMUSG00000030057	protein_coding	Cnbp	ENSMUST00000204104	retained_intron		6	-1	87846317	690
ENSMUSG00000076870	TR_J_gene	Trdj1	ENSMUST00000103682	TR_J_gene	principal1	14	1	54123138	51
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000112138	protein_coding	principal3	2	1	71211758	2466
ENSMUSG00000089716	transcribed_unprocessed_pseudogene	Gm6264	ENSMUST00000160802	transcribed_unprocessed_pseudogene		1	1	85159764	624
ENSMUSG00000089716	transcribed_unprocessed_pseudogene	Gm6264	ENSMUST00000162896	transcribed_unprocessed_pseudogene		1	1	85160863	1217
ENSMUSG00000025508	protein_coding	Rplp2	ENSMUST00000106004	protein_coding	principal1	7	1	141447712	421
ENSMUSG00000104658	antisense	Gm30275	ENSMUST00000198124	antisense		14	-1	54125342	416
ENSMUSG00000089872	protein_coding	Rps6kc1	ENSMUST00000061611	protein_coding	principal1	1	-1	190911770	3995
ENSMUSG00000049154	protein_coding	Fam183b	ENSMUST00000094156	protein_coding	alternative2	11	-1	58801960	567
ENSMUSG00000025508	protein_coding	Rplp2	ENSMUST00000106003	protein_coding	principal1	7	1	141447850	449
ENSMUSG00000035298	protein_coding	Klhl35	ENSMUST00000037359	protein_coding	principal1	7	1	99466004	1954
ENSMUSG00000104658	antisense	Gm30275	ENSMUST00000197620	antisense		14	-1	54125395	498
ENSMUSG00000049154	protein_coding	Fam183b	ENSMUST00000060581	protein_coding		11	-1	58801960	493
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000141619	processed_transcript		2	1	71211806	679
ENSMUSG00000089872	protein_coding	Rps6kc1	ENSMUST00000159823	retained_intron		1	-1	190844584	4792
ENSMUSG00000010066	protein_coding	Cacna2d2	ENSMUST00000168532	protein_coding	alternative2	9	1	107399612	5807
ENSMUSG00000025508	protein_coding	Rplp2	ENSMUST00000134636	retained_intron		7	1	141450822	399
ENSMUSG00000096176	TR_D_gene	Trdd2	ENSMUST00000177564	TR_D_gene	principal1	14	1	54122226	16
ENSMUSG00000089872	protein_coding	Rps6kc1	ENSMUST00000162500	retained_intron		1	-1	190911734	2913
ENSMUSG00000035298	protein_coding	Klhl35	ENSMUST00000153736	nonsense_mediated_decay		7	1	99468963	363
ENSMUSG00000083782	processed_pseudogene	Gm11660	ENSMUST00000120955	processed_pseudogene		11	1	104491613	412
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000081710	protein_coding	principal3	2	1	71211834	2631
ENSMUSG00000089872	protein_coding	Rps6kc1	ENSMUST00000160891	retained_intron		1	-1	190810463	518
ENSMUSG00000096749	TR_D_gene	Trdd1	ENSMUST00000196221	TR_D_gene	principal1	14	1	54113468	9
ENSMUSG00000047945	protein_coding	Marcksl1	ENSMUST00000062356	protein_coding	principal1	4	1	129513581	1605
ENSMUSG00000004110	protein_coding	Cacna1e	ENSMUST00000188965	retained_intron		1	-1	154816941	4056
ENSMUSG00000089872	protein_coding	Rps6kc1	ENSMUST00000162692	processed_transcript		1	-1	190899717	406
ENSMUSG00000035298	protein_coding	Klhl35	ENSMUST00000142339	retained_intron		7	1	99469955	702
ENSMUSG00000096749	TR_D_gene	Trdd1	ENSMUST00000179664	processed_transcript		14	1	54113468	11
ENSMUSG00000089872	protein_coding	Rps6kc1	ENSMUST00000159066	protein_coding		1	-1	190911769	503
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000112144	protein_coding	alternative1	2	1	71211972	2565
ENSMUSG00000049154	protein_coding	Fam183b	ENSMUST00000239007	protein_coding	principal2	11	-1	58801960	561
ENSMUSG00000004110	protein_coding	Cacna1e	ENSMUST00000238369	protein_coding		1	-1	154816941	1842
ENSMUSG00000030057	protein_coding	Cnbp	ENSMUST00000032138	protein_coding	principal3	6	-1	87851106	2178
ENSMUSG00000035298	protein_coding	Klhl35	ENSMUST00000152424	protein_coding		7	1	99471826	646
ENSMUSG00000049154	protein_coding	Fam183b	ENSMUST00000238886	protein_coding		11	-1	58801960	501
ENSMUSG00000004110	protein_coding	Cacna1e	ENSMUST00000188321	retained_intron		1	-1	154884501	2356
ENSMUSG00000112125	lincRNA	Gm48024	ENSMUST00000219293	lincRNA		10	-1	70868452	658
ENSMUSG00000092562	processed_pseudogene	Gm20414	ENSMUST00000172918	processed_pseudogene		7	-1	85261334	646
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000100028	protein_coding	alternative1	2	1	71211984	2097
ENSMUSG00000004110	protein_coding	Cacna1e	ENSMUST00000186256	retained_intron		1	-1	154884024	1859
ENSMUSG00000092313	unprocessed_pseudogene	Gm20415	ENSMUST00000172877	unprocessed_pseudogene		7	-1	85289611	423
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000112136	protein_coding	alternative1	2	1	71211992	2548
ENSMUSG00000113431	processed_pseudogene	Gm6722	ENSMUST00000221586	processed_pseudogene		12	-1	83621069	390
ENSMUSG00000070438	protein_coding	Olfr313	ENSMUST00000217506	protein_coding	principal1	11	1	58815000	2612
ENSMUSG00000004110	protein_coding	Cacna1e	ENSMUST00000004214	protein_coding		1	-1	154725920	12697
ENSMUSG00000032081	protein_coding	Apoc3	ENSMUST00000121916	protein_coding		9	-1	46235260	709
ENSMUSG00000090773	unprocessed_pseudogene	Vmn2r-ps69	ENSMUST00000173382	unprocessed_pseudogene		7	1	85303953	2565
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000149735	retained_intron		2	1	71212004	2248
ENSMUSG00000099639	lincRNA	1700084F23Rik	ENSMUST00000186662	lincRNA		13	-1	70028348	1044
ENSMUSG00000050312	protein_coding	Nsun3	ENSMUST00000063089	protein_coding	principal1	16	-1	62786777	3813
ENSMUSG00000099639	lincRNA	1700084F23Rik	ENSMUST00000189890	lincRNA		13	-1	70027363	410
ENSMUSG00000030868	protein_coding	Dctn5	ENSMUST00000033156	protein_coding	principal1	7	1	122133041	1532
ENSMUSG00000070438	protein_coding	Olfr313	ENSMUST00000082220	protein_coding	principal1	11	1	58816928	1074
ENSMUSG00000099639	lincRNA	1700084F23Rik	ENSMUST00000188461	lincRNA		13	-1	70026847	747
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000137683	retained_intron		2	1	71234799	4523
ENSMUSG00000099639	lincRNA	1700084F23Rik	ENSMUST00000191362	lincRNA		13	-1	70028323	743
ENSMUSG00000034456	protein_coding	Uroc1	ENSMUST00000046128	protein_coding	principal1	6	1	90333284	3370
ENSMUSG00000118146	processed_pseudogene	Cyp2c72-ps	ENSMUST00000237454	processed_pseudogene		19	1	39347367	516
ENSMUSG00000035095	protein_coding	Fam167a	ENSMUST00000121288	protein_coding	principal1	14	1	63436394	4231
ENSMUSG00000022684	protein_coding	Bfar	ENSMUST00000023365	protein_coding	principal1	16	1	13671858	3003
ENSMUSG00000089844	protein_coding	A530032D15Rik	ENSMUST00000161724	protein_coding	alternative2	1	-1	85109449	789
ENSMUSG00000027012	protein_coding	Dync1i2	ENSMUST00000138613	retained_intron		2	1	71260547	812
ENSMUSG00000050312	protein_coding	Nsun3	ENSMUST00000143314	nonsense_mediated_decay		16	-1	62786777	3565
ENSMUSG00000099639	lincRNA	1700084F23Rik	ENSMUST00000189784	lincRNA		13	-1	70028319	409
ENSMUSG00000036912	protein_coding	Piwil4	ENSMUST00000136399	protein_coding		9	-1	14705070	2190
ENSMUSG00000047361	protein_coding	Gm973	ENSMUST00000114243	protein_coding	principal1	1	1	59516264	3595
ENSMUSG00000050312	protein_coding	Nsun3	ENSMUST00000156676	processed_transcript		16	-1	62767123	321
ENSMUSG00000117747	transcribed_processed_pseudogene	Gm50438	ENSMUST00000236589	transcribed_processed_pseudogene		18	1	90530936	554
ENSMUSG00000035095	protein_coding	Fam167a	ENSMUST00000128313	retained_intron		14	1	63436409	368
ENSMUSG00000096806	protein_coding	Olfr312	ENSMUST00000216407	protein_coding	principal1	11	1	58829237	3776
ENSMUSG00000050312	protein_coding	Nsun3	ENSMUST00000152553	protein_coding		16	-1	62786766	461
ENSMUSG00000031239	protein_coding	Itm2a	ENSMUST00000033591	protein_coding	principal1	X	-1	107403376	1744
ENSMUSG00000089844	protein_coding	A530032D15Rik	ENSMUST00000160792	protein_coding	principal2	1	-1	85109853	1492
ENSMUSG00000031133	protein_coding	Arhgef6	ENSMUST00000151768	retained_intron		X	-1	57240889	2696
ENSMUSG00000030868	protein_coding	Dctn5	ENSMUST00000123602	retained_intron		7	1	122133054	2506
ENSMUSG00000034456	protein_coding	Uroc1	ENSMUST00000164761	protein_coding		6	1	90333289	3462
ENSMUSG00000022376	protein_coding	Adcy8	ENSMUST00000023007	protein_coding	principal2	15	-1	64922296	6990
ENSMUSG00000022684	protein_coding	Bfar	ENSMUST00000127973	nonsense_mediated_decay		16	1	13671950	1407
ENSMUSG00000030671	protein_coding	Pde3b	ENSMUST00000032909	protein_coding	principal1	7	1	114415281	6573
ENSMUSG00000047361	protein_coding	Gm973	ENSMUST00000186434	protein_coding		1	1	59524294	1430
ENSMUSG00000096806	protein_coding	Olfr312	ENSMUST00000078217	protein_coding	principal1	11	1	58831156	927
ENSMUSG00000022684	protein_coding	Bfar	ENSMUST00000230905	retained_intron		16	1	13671987	2121
ENSMUSG00000089844	protein_coding	A530032D15Rik	ENSMUST00000161675	protein_coding		1	-1	85109846	492
ENSMUSG00000117343	processed_pseudogene	Gm19145	ENSMUST00000234079	processed_pseudogene		17	-1	92185957	570
ENSMUSG00000114258	processed_pseudogene	Gm47074	ENSMUST00000226020	processed_pseudogene		14	-1	63475376	260
ENSMUSG00000050312	protein_coding	Nsun3	ENSMUST00000151583	processed_transcript		16	-1	62786818	583
ENSMUSG00000022376	protein_coding	Adcy8	ENSMUST00000228014	protein_coding	alternative2	15	-1	64922296	6900
ENSMUSG00000047361	protein_coding	Gm973	ENSMUST00000185291	retained_intron		1	1	59544221	648
ENSMUSG00000050248	protein_coding	Evc2	ENSMUST00000056365	protein_coding	principal1	5	1	37338499	4091
ENSMUSG00000117624	processed_pseudogene	Gm6751	ENSMUST00000234379	processed_pseudogene		17	-1	92373116	1102
ENSMUSG00000050312	protein_coding	Nsun3	ENSMUST00000152842	processed_transcript		16	-1	62786713	892
ENSMUSG00000030671	protein_coding	Pde3b	ENSMUST00000140007	retained_intron		7	1	114506178	485
ENSMUSG00000050312	protein_coding	Nsun3	ENSMUST00000231289	retained_intron		16	-1	62786766	1530
ENSMUSG00000030671	protein_coding	Pde3b	ENSMUST00000210411	retained_intron		7	1	114507142	2658
ENSMUSG00000030868	protein_coding	Dctn5	ENSMUST00000176193	nonsense_mediated_decay		7	1	122133072	416
ENSMUSG00000064281	processed_pseudogene	Rpl19-ps1	ENSMUST00000121059	processed_pseudogene		1	1	85012114	591
ENSMUSG00000082172	processed_pseudogene	Gm14835	ENSMUST00000119039	processed_pseudogene		X	-1	107406208	315
ENSMUSG00000047361	protein_coding	Gm973	ENSMUST00000186310	processed_transcript		1	1	59548831	921
ENSMUSG00000106061	sense_intronic	Gm43773	ENSMUST00000198548	sense_intronic		3	-1	94535966	2162
ENSMUSG00000030671	protein_coding	Pde3b	ENSMUST00000149455	retained_intron		7	1	114521734	719
ENSMUSG00000030868	protein_coding	Dctn5	ENSMUST00000176295	nonsense_mediated_decay		7	1	122143809	734
ENSMUSG00000107200	TEC	Gm43039	ENSMUST00000202883	TEC		5	-1	91958962	963
ENSMUSG00000022684	protein_coding	Bfar	ENSMUST00000069281	protein_coding		16	1	13672020	2456
ENSMUSG00000022376	protein_coding	Adcy8	ENSMUST00000228109	retained_intron		15	-1	64922271	4233
ENSMUSG00000047361	protein_coding	Gm973	ENSMUST00000187979	retained_intron		1	1	59558008	427
ENSMUSG00000105412	sense_intronic	Gm43768	ENSMUST00000198380	sense_intronic		3	-1	94577034	1258
ENSMUSG00000047361	protein_coding	Gm973	ENSMUST00000212835	protein_coding		1	1	59582396	291
ENSMUSG00000104631	sense_intronic	Gm43774	ENSMUST00000196327	sense_intronic		3	-1	94537488	878
ENSMUSG00000032081	protein_coding	Apoc3	ENSMUST00000034586	protein_coding	principal1	9	-1	46235299	526
ENSMUSG00000055700	transcribed_processed_pseudogene	4933401B06Rik	ENSMUST00000142024	processed_transcript		X	1	107542582	1219
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000021866	protein_coding	principal1	13	1	38036995	2738
ENSMUSG00000052477	protein_coding	C130026I21Rik	ENSMUST00000159114	processed_transcript		1	-1	85246397	556
ENSMUSG00000003849	protein_coding	Nqo1	ENSMUST00000003947	protein_coding	principal1	8	-1	107403206	1553
ENSMUSG00000091967	polymorphic_pseudogene	Vmn2r128	ENSMUST00000175971	polymorphic_pseudogene	principal5	3	-1	64357724	2721
ENSMUSG00000055700	transcribed_processed_pseudogene	4933401B06Rik	ENSMUST00000139758	transcribed_processed_pseudogene		X	1	107542591	1155
ENSMUSG00000022684	protein_coding	Bfar	ENSMUST00000132349	retained_intron		16	1	13672062	572
ENSMUSG00000050248	protein_coding	Evc2	ENSMUST00000101258	retained_intron		5	1	37338608	2796
ENSMUSG00000021720	protein_coding	Rnf180	ENSMUST00000226044	protein_coding	alternative2	13	-1	105294402	3279
ENSMUSG00000091967	polymorphic_pseudogene	Vmn2r128	ENSMUST00000234658	protein_coding	alternative2	3	-1	64344627	1287
ENSMUSG00000022684	protein_coding	Bfar	ENSMUST00000144804	retained_intron		16	1	13684891	659
ENSMUSG00000050248	protein_coding	Evc2	ENSMUST00000159915	processed_transcript		5	1	37389904	728
ENSMUSG00000101517	lincRNA	4732465J04Rik	ENSMUST00000187483	lincRNA		10	1	95746077	2744
ENSMUSG00000052477	protein_coding	C130026I21Rik	ENSMUST00000161267	protein_coding	alternative2	1	-1	85270178	652
ENSMUSG00000032081	protein_coding	Apoc3	ENSMUST00000214729	processed_transcript		9	-1	46235299	449
ENSMUSG00000050248	protein_coding	Evc2	ENSMUST00000159854	retained_intron		5	1	37415859	600
ENSMUSG00000101517	lincRNA	4732465J04Rik	ENSMUST00000185499	lincRNA		10	1	95778917	2751
ENSMUSG00000022684	protein_coding	Bfar	ENSMUST00000148079	retained_intron		16	1	13685231	750
ENSMUSG00000052477	protein_coding	C130026I21Rik	ENSMUST00000162421	protein_coding	alternative2	1	-1	85262070	591
ENSMUSG00000057290	processed_pseudogene	Gm15732	ENSMUST00000079794	processed_pseudogene		5	-1	37404863	480
ENSMUSG00000033342	protein_coding	Plppr5	ENSMUST00000239347	protein_coding		3	1	117485084	3653
ENSMUSG00000021720	protein_coding	Rnf180	ENSMUST00000224662	protein_coding	alternative2	13	-1	105294429	2734
ENSMUSG00000044795	protein_coding	Cyb5d1	ENSMUST00000134903	processed_transcript		11	-1	69395631	778
ENSMUSG00000022684	protein_coding	Bfar	ENSMUST00000154568	retained_intron		16	1	13691965	787
ENSMUSG00000004032	protein_coding	Gstm5	ENSMUST00000004134	protein_coding	principal1	3	1	107895821	945
ENSMUSG00000032081	protein_coding	Apoc3	ENSMUST00000118649	protein_coding	principal1	9	-1	46235636	453
ENSMUSG00000098122	processed_pseudogene	Gm27039	ENSMUST00000182438	processed_pseudogene		17	-1	92528510	962
ENSMUSG00000032081	protein_coding	Apoc3	ENSMUST00000145672	protein_coding		9	-1	46235469	323
ENSMUSG00000105181	processed_pseudogene	Gm19620	ENSMUST00000195972	processed_pseudogene		5	-1	100513620	434
ENSMUSG00000047361	protein_coding	Gm973	ENSMUST00000187454	processed_transcript		1	1	59606782	580
ENSMUSG00000021720	protein_coding	Rnf180	ENSMUST00000224011	protein_coding	principal2	13	-1	105293014	3785
ENSMUSG00000029397	protein_coding	Rchy1	ENSMUST00000140670	processed_transcript		5	-1	91962556	1959
ENSMUSG00000047361	protein_coding	Gm973	ENSMUST00000185753	processed_transcript		1	1	59606816	612
ENSMUSG00000117354	processed_pseudogene	Gm49995	ENSMUST00000234942	processed_pseudogene		17	-1	92600526	305
ENSMUSG00000047361	protein_coding	Gm973	ENSMUST00000191051	processed_transcript		1	1	59619414	348
ENSMUSG00000044795	protein_coding	Cyb5d1	ENSMUST00000108660	protein_coding		11	-1	69395333	1034
ENSMUSG00000117625	processed_pseudogene	Gm21018	ENSMUST00000234136	processed_pseudogene		17	-1	92719076	1192
ENSMUSG00000021720	protein_coding	Rnf180	ENSMUST00000224749	protein_coding		13	-1	105294815	1017
ENSMUSG00000021720	protein_coding	Rnf180	ENSMUST00000069686	protein_coding	principal2	13	-1	105271039	1728
ENSMUSG00000044795	protein_coding	Cyb5d1	ENSMUST00000051620	protein_coding	principal1	11	-1	69395333	753
ENSMUSG00000033342	protein_coding	Plppr5	ENSMUST00000039564	protein_coding	principal3	3	1	117574836	4670
ENSMUSG00000040715	protein_coding	Rsc1a1	ENSMUST00000105782	protein_coding	principal1	4	-1	141685599	1749
ENSMUSG00000115293	protein_coding	Gm49333	ENSMUST00000120394	protein_coding	principal4	16	1	20611610	3432
ENSMUSG00000047361	protein_coding	Gm973	ENSMUST00000190490	protein_coding		1	1	59630323	933
ENSMUSG00000033342	protein_coding	Plppr5	ENSMUST00000238937	protein_coding		3	1	117574836	4798
ENSMUSG00000010066	protein_coding	Cacna2d2	ENSMUST00000085092	protein_coding	principal4	9	1	107399880	5183
ENSMUSG00000036912	protein_coding	Piwil4	ENSMUST00000115644	protein_coding	principal1	9	-1	14740740	3323
ENSMUSG00000013858	protein_coding	Tmem259	ENSMUST00000132080	retained_intron		10	-1	79978773	3487
ENSMUSG00000010066	protein_coding	Cacna2d2	ENSMUST00000166799	protein_coding	alternative2	9	1	107400069	3474
ENSMUSG00000099811	antisense	Gm28411	ENSMUST00000191318	antisense		1	-1	59548788	464
ENSMUSG00000033342	protein_coding	Plppr5	ENSMUST00000106473	protein_coding	alternative1	3	1	117575227	4294
ENSMUSG00000004032	protein_coding	Gstm5	ENSMUST00000167523	nonsense_mediated_decay		3	1	107895836	869
ENSMUSG00000019843	protein_coding	Fyn	ENSMUST00000148152	protein_coding		10	1	39368855	675
ENSMUSG00000010066	protein_coding	Cacna2d2	ENSMUST00000170737	protein_coding	alternative2	9	1	107400069	5332
ENSMUSG00000099811	antisense	Gm28411	ENSMUST00000189864	antisense		1	-1	59549521	341
ENSMUSG00000079164	protein_coding	Tlr5	ENSMUST00000193687	protein_coding		1	1	182954788	2847
ENSMUSG00000013858	protein_coding	Tmem259	ENSMUST00000126383	retained_intron		10	-1	79978940	2656
ENSMUSG00000045377	protein_coding	Tmem88	ENSMUST00000050140	protein_coding	principal1	11	-1	69398234	1582
ENSMUSG00000010066	protein_coding	Cacna2d2	ENSMUST00000169354	processed_transcript		9	1	107505604	671
ENSMUSG00000010066	protein_coding	Cacna2d2	ENSMUST00000171809	processed_transcript		9	1	107509280	727
ENSMUSG00000079164	protein_coding	Tlr5	ENSMUST00000193539	processed_transcript		1	1	182954822	888
ENSMUSG00000010066	protein_coding	Cacna2d2	ENSMUST00000194842	retained_intron		9	1	107521512	1975
ENSMUSG00000115293	protein_coding	Gm49333	ENSMUST00000079600	protein_coding	alternative2	16	1	20611625	3325
ENSMUSG00000059278	protein_coding	Naa38	ENSMUST00000142126	processed_transcript		11	1	69395487	343
ENSMUSG00000036912	protein_coding	Piwil4	ENSMUST00000115643	processed_transcript		9	-1	14718473	2111
ENSMUSG00000020251	protein_coding	Glt8d2	ENSMUST00000020485	protein_coding	principal1	10	-1	82690650	2153
ENSMUSG00000079164	protein_coding	Tlr5	ENSMUST00000195614	processed_transcript		1	1	182954828	498
ENSMUSG00000010066	protein_coding	Cacna2d2	ENSMUST00000168959	retained_intron		9	1	107526657	604
ENSMUSG00000079164	protein_coding	Tlr5	ENSMUST00000191820	protein_coding	alternative2	1	1	182972177	3818
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000223656	nonsense_mediated_decay		13	1	38037018	2373
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000223910	retained_intron		13	1	38037245	2509
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000225954	processed_transcript		13	1	38037270	569
ENSMUSG00000085495	antisense	Gm16796	ENSMUST00000126086	antisense		2	-1	170511927	3172
ENSMUSG00000020251	protein_coding	Glt8d2	ENSMUST00000128142	retained_intron		10	-1	82653199	543
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000212990	protein_coding		8	-1	83572940	648
ENSMUSG00000079164	protein_coding	Tlr5	ENSMUST00000110997	protein_coding	principal2	1	1	182954788	3199
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000111106	protein_coding	principal2	1	-1	180253138	2020
ENSMUSG00000020251	protein_coding	Glt8d2	ENSMUST00000150269	protein_coding		10	-1	82652980	623
ENSMUSG00000036912	protein_coding	Piwil4	ENSMUST00000076946	protein_coding		9	-1	14740733	2637
ENSMUSG00000037990	protein_coding	Sh3rf3	ENSMUST00000135526	protein_coding		10	1	58813359	1940
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000226006	retained_intron		13	1	38037282	2307
ENSMUSG00000082564	processed_pseudogene	Gm15586	ENSMUST00000121218	processed_pseudogene		9	1	14736195	528
ENSMUSG00000004032	protein_coding	Gstm5	ENSMUST00000170058	nonsense_mediated_decay		3	1	107895846	1083
ENSMUSG00000020251	protein_coding	Glt8d2	ENSMUST00000065815	protein_coding		10	-1	82690617	1240
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000224477	nonsense_mediated_decay		13	1	38037296	886
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000111108	protein_coding	principal2	1	-1	180256300	1997
ENSMUSG00000004032	protein_coding	Gstm5	ENSMUST00000172247	protein_coding		3	1	107895941	658
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000226110	protein_coding		13	1	38039047	386
ENSMUSG00000020251	protein_coding	Glt8d2	ENSMUST00000125505	nonsense_mediated_decay		10	-1	82690617	659
ENSMUSG00000006724	protein_coding	Cyp27b1	ENSMUST00000165764	protein_coding	principal1	10	1	127048250	2380
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000212005	nonsense_mediated_decay		8	-1	83573253	878
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000193897	retained_intron		1	-1	180229568	1449
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000224683	retained_intron		13	1	38040197	619
ENSMUSG00000020251	protein_coding	Glt8d2	ENSMUST00000155529	protein_coding		10	-1	82670468	351
ENSMUSG00000019579	protein_coding	Mydgf	ENSMUST00000019723	protein_coding	principal1	17	-1	56183920	1710
ENSMUSG00000074508	antisense	Gm10706	ENSMUST00000128327	antisense		9	1	14704642	1960
ENSMUSG00000059278	protein_coding	Naa38	ENSMUST00000144531	protein_coding	principal1	11	1	69395647	671
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000224956	protein_coding		13	1	38040225	619
ENSMUSG00000052477	protein_coding	C130026I21Rik	ENSMUST00000161685	protein_coding		1	-1	85254548	809
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000225816	retained_intron		13	1	38046326	1791
ENSMUSG00000020251	protein_coding	Glt8d2	ENSMUST00000140071	retained_intron		10	-1	82690629	2963
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000225418	retained_intron		13	1	38048459	734
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000010753	protein_coding	principal2	1	-1	180245950	2004
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000226056	retained_intron		13	1	38050437	1198
ENSMUSG00000000791	protein_coding	Il12rb1	ENSMUST00000000808	protein_coding	principal2	8	1	70808449	2873
ENSMUSG00000019579	protein_coding	Mydgf	ENSMUST00000140885	retained_intron		17	-1	56183849	464
ENSMUSG00000004032	protein_coding	Gstm5	ENSMUST00000167387	protein_coding		3	1	107895954	599
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000224962	retained_intron		13	1	38056673	1464
ENSMUSG00000019579	protein_coding	Mydgf	ENSMUST00000151093	processed_transcript		17	-1	56183664	445
ENSMUSG00000006724	protein_coding	Cyp27b1	ENSMUST00000172069	nonsense_mediated_decay		10	1	127048250	2443
ENSMUSG00000004032	protein_coding	Gstm5	ENSMUST00000169365	protein_coding		3	1	107896247	810
ENSMUSG00000059278	protein_coding	Naa38	ENSMUST00000082283	processed_transcript		11	1	69395814	533
ENSMUSG00000000791	protein_coding	Il12rb1	ENSMUST00000212657	protein_coding	alternative2	8	1	70808484	2741
ENSMUSG00000010066	protein_coding	Cacna2d2	ENSMUST00000164988	protein_coding	alternative2	9	1	107399880	5542
ENSMUSG00000021974	protein_coding	Fgf9	ENSMUST00000165526	protein_coding		14	1	58070547	3593
ENSMUSG00000059278	protein_coding	Naa38	ENSMUST00000124932	processed_transcript		11	1	69396118	404
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000136291	processed_transcript		1	-1	180230062	659
ENSMUSG00000006724	protein_coding	Cyp27b1	ENSMUST00000171868	processed_transcript		10	1	127048671	509
ENSMUSG00000031951	protein_coding	Tmem231	ENSMUST00000034429	protein_coding	principal1	8	-1	111933881	2984
ENSMUSG00000105456	TEC	Gm43745	ENSMUST00000198085	TEC		3	1	107885966	1883
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000111105	protein_coding	principal2	1	-1	180248150	1575
ENSMUSG00000000791	protein_coding	Il12rb1	ENSMUST00000212146	protein_coding		8	1	70808487	729
ENSMUSG00000021428	protein_coding	Riok1	ENSMUST00000225174	retained_intron		13	1	38057215	2006
ENSMUSG00000104637	processed_pseudogene	Gm42424	ENSMUST00000198319	processed_pseudogene		5	1	139701647	376
ENSMUSG00000078515	protein_coding	Ddi2	ENSMUST00000102484	protein_coding	principal1	4	-1	141723419	9553
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000111104	protein_coding	alternative1	1	-1	180245757	1475
ENSMUSG00000000791	protein_coding	Il12rb1	ENSMUST00000212251	retained_intron		8	1	70812340	389
ENSMUSG00000031951	protein_coding	Tmem231	ENSMUST00000211866	nonsense_mediated_decay		8	-1	111933799	2920
ENSMUSG00000000791	protein_coding	Il12rb1	ENSMUST00000212826	retained_intron		8	1	70813216	427
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000130029	processed_transcript		1	-1	180230025	538
ENSMUSG00000091816	antisense	Gm17141	ENSMUST00000167578	antisense		9	-1	107430567	3148
ENSMUSG00000031951	protein_coding	Tmem231	ENSMUST00000213050	retained_intron		8	-1	111928160	2388
ENSMUSG00000092049	protein_coding	Vmn2r4	ENSMUST00000233020	retained_intron		3	-1	64415368	9549
ENSMUSG00000029276	protein_coding	Glmn	ENSMUST00000078021	protein_coding	principal1	5	-1	107597639	2015
ENSMUSG00000052033	protein_coding	Pfdn4	ENSMUST00000075087	protein_coding		2	1	170496428	816
ENSMUSG00000107272	transcribed_processed_pseudogene	Gm34583	ENSMUST00000202537	processed_transcript		5	1	73380560	451
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000149590	retained_intron		1	-1	180256244	1998
ENSMUSG00000107272	transcribed_processed_pseudogene	Gm34583	ENSMUST00000201548	processed_transcript		5	1	73380605	459
ENSMUSG00000092049	protein_coding	Vmn2r4	ENSMUST00000233824	nonsense_mediated_decay		3	-1	64415368	8613
ENSMUSG00000107272	transcribed_processed_pseudogene	Gm34583	ENSMUST00000202586	transcribed_processed_pseudogene		5	1	73390649	454
ENSMUSG00000092049	protein_coding	Vmn2r4	ENSMUST00000175724	protein_coding	principal1	3	-1	64415368	8390
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000128223	retained_intron		1	-1	180239222	454
ENSMUSG00000029276	protein_coding	Glmn	ENSMUST00000100949	protein_coding		5	-1	107597577	1759
ENSMUSG00000010609	protein_coding	Psen2	ENSMUST00000133340	protein_coding		1	-1	180263438	232
ENSMUSG00000092049	protein_coding	Vmn2r4	ENSMUST00000170280	protein_coding		3	-1	64410057	2484
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000144331	protein_coding	principal2	17	-1	51832672	6243
ENSMUSG00000042302	protein_coding	Ehbp1	ENSMUST00000045167	protein_coding	principal3	11	-1	22285838	4821
ENSMUSG00000102923	antisense	Gm31728	ENSMUST00000192164	antisense		1	1	180256429	435
ENSMUSG00000040557	protein_coding	Mettl27	ENSMUST00000047196	protein_coding	principal1	5	1	134932368	2808
ENSMUSG00000021974	protein_coding	Fgf9	ENSMUST00000022545	protein_coding	principal1	14	1	58072686	1593
ENSMUSG00000035435	protein_coding	Abca17	ENSMUST00000121226	protein_coding	principal1	17	-1	24351029	5317
ENSMUSG00000093395	unprocessed_pseudogene	Vmn2r-ps6	ENSMUST00000176317	unprocessed_pseudogene		3	-1	64438287	1101
ENSMUSG00000078515	protein_coding	Ddi2	ENSMUST00000177592	protein_coding		4	-1	141723419	3539
ENSMUSG00000035435	protein_coding	Abca17	ENSMUST00000227002	processed_transcript		17	-1	24328532	9
ENSMUSG00000093546	unprocessed_pseudogene	Vmn2r-ps7	ENSMUST00000176244	unprocessed_pseudogene		3	-1	64443975	1098
ENSMUSG00000001229	protein_coding	Dpp9	ENSMUST00000223616	retained_intron		17	-1	56209208	5366
ENSMUSG00000035435	protein_coding	Abca17	ENSMUST00000234232	protein_coding		17	-1	24351068	960
ENSMUSG00000042302	protein_coding	Ehbp1	ENSMUST00000152372	processed_transcript		11	-1	22173006	1267
ENSMUSG00000021974	protein_coding	Fgf9	ENSMUST00000074654	protein_coding		14	1	58075115	1198
ENSMUSG00000093671	unprocessed_pseudogene	Gm20656	ENSMUST00000176925	unprocessed_pseudogene		3	1	64447967	518
ENSMUSG00000042302	protein_coding	Ehbp1	ENSMUST00000134293	protein_coding		11	-1	22285872	1207
ENSMUSG00000029276	protein_coding	Glmn	ENSMUST00000137939	retained_intron		5	-1	107551410	676
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000133574	protein_coding	principal2	17	-1	51833290	3461
ENSMUSG00000021974	protein_coding	Fgf9	ENSMUST00000166770	protein_coding		14	1	58076507	321
ENSMUSG00000112771	lincRNA	Gm47718	ENSMUST00000218099	lincRNA		10	-1	95817895	1334
ENSMUSG00000110353	protein_coding	Gm33543	ENSMUST00000209662	retained_intron		10	-1	95826039	1431
ENSMUSG00000094482	unprocessed_pseudogene	Vmn2r-ps8	ENSMUST00000177088	unprocessed_pseudogene		3	1	64477018	898
ENSMUSG00000035435	protein_coding	Abca17	ENSMUST00000039324	protein_coding	principal1	17	-1	24347252	5202
ENSMUSG00000091132	processed_pseudogene	Gm17109	ENSMUST00000163985	processed_pseudogene		14	-1	58106129	358
ENSMUSG00000110353	protein_coding	Gm33543	ENSMUST00000211096	protein_coding	principal5	10	-1	95842930	1722
ENSMUSG00000029276	protein_coding	Glmn	ENSMUST00000082121	protein_coding	principal1	5	-1	107597888	1945
ENSMUSG00000042302	protein_coding	Ehbp1	ENSMUST00000136762	processed_transcript		11	-1	22171410	406
ENSMUSG00000037990	protein_coding	Sh3rf3	ENSMUST00000153031	protein_coding	principal1	10	1	58813458	5682
ENSMUSG00000110353	protein_coding	Gm33543	ENSMUST00000210336	protein_coding	alternative2	10	-1	95842896	1428
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000176669	protein_coding	principal2	17	-1	51810919	4407
ENSMUSG00000040557	protein_coding	Mettl27	ENSMUST00000111221	protein_coding		5	1	134932373	1796
ENSMUSG00000029397	protein_coding	Rchy1	ENSMUST00000031345	protein_coding	principal1	5	-1	91963068	1967
ENSMUSG00000112599	lincRNA	Gm47719	ENSMUST00000220129	lincRNA		10	1	95817570	1228
ENSMUSG00000116183	processed_pseudogene	Gm49480	ENSMUST00000230120	processed_pseudogene		15	-1	102308762	142
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000041023	protein_coding	principal1	1	-1	135430499	6247
ENSMUSG00000042302	protein_coding	Ehbp1	ENSMUST00000137594	processed_transcript		11	-1	22342292	460
ENSMUSG00000037843	protein_coding	Vstm2l	ENSMUST00000109523	protein_coding	principal1	2	1	157914653	1363
ENSMUSG00000111992	processed_pseudogene	Gm47724	ENSMUST00000218412	processed_pseudogene		10	-1	95870799	317
ENSMUSG00000037990	protein_coding	Sh3rf3	ENSMUST00000133151	retained_intron		10	1	58814059	496
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000129667	protein_coding	principal2	17	-1	51826566	2896
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000035170	protein_coding	principal2	9	-1	104262930	8012
ENSMUSG00000110411	TEC	Gm45457	ENSMUST00000209931	TEC		8	1	45779228	3089
ENSMUSG00000027378	protein_coding	Nphp1	ENSMUST00000028857	protein_coding	principal3	2	-1	127788854	2260
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000018593	protein_coding	principal1	11	1	70970213	1100
ENSMUSG00000029397	protein_coding	Rchy1	ENSMUST00000169948	protein_coding		5	-1	91962735	1417
ENSMUSG00000052477	protein_coding	C130026I21Rik	ENSMUST00000159582	protein_coding		1	-1	85270143	739
ENSMUSG00000052033	protein_coding	Pfdn4	ENSMUST00000063682	protein_coding	principal3	2	1	170511235	935
ENSMUSG00000024614	protein_coding	Tmx3	ENSMUST00000025515	protein_coding	principal2	18	1	90510154	4611
ENSMUSG00000109665	TEC	Gm45458	ENSMUST00000209900	TEC		8	-1	45540115	522
ENSMUSG00000040557	protein_coding	Mettl27	ENSMUST00000111219	protein_coding	principal1	5	1	134932373	1790
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000189813	retained_intron		9	-1	104153496	601
ENSMUSG00000029397	protein_coding	Rchy1	ENSMUST00000138351	retained_intron		5	-1	91953754	715
ENSMUSG00000040557	protein_coding	Mettl27	ENSMUST00000068617	protein_coding		5	1	134932385	1685
ENSMUSG00000029397	protein_coding	Rchy1	ENSMUST00000200905	retained_intron		5	-1	91962726	1046
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000154430	nonsense_mediated_decay		11	1	70970227	759
ENSMUSG00000052033	protein_coding	Pfdn4	ENSMUST00000136839	protein_coding	alternative2	2	1	170511445	452
ENSMUSG00000042302	protein_coding	Ehbp1	ENSMUST00000180360	protein_coding	principal3	11	-1	22286795	4971
ENSMUSG00000037990	protein_coding	Sh3rf3	ENSMUST00000148267	retained_intron		10	1	59065651	1743
ENSMUSG00000052033	protein_coding	Pfdn4	ENSMUST00000109148	protein_coding		2	1	170511520	736
ENSMUSG00000037990	protein_coding	Sh3rf3	ENSMUST00000152924	processed_transcript		10	1	59080034	685
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000188139	protein_coding		9	-1	104160609	668
ENSMUSG00000027378	protein_coding	Nphp1	ENSMUST00000144938	processed_transcript		2	-1	127744547	631
ENSMUSG00000040557	protein_coding	Mettl27	ENSMUST00000111218	protein_coding	principal1	5	1	134932392	1387
ENSMUSG00000044566	protein_coding	Cage1	ENSMUST00000110233	protein_coding	principal1	13	-1	38036923	2875
ENSMUSG00000042302	protein_coding	Ehbp1	ENSMUST00000109563	protein_coding	alternative2	11	-1	22286795	5046
ENSMUSG00000052033	protein_coding	Pfdn4	ENSMUST00000170167	protein_coding		2	1	170511560	666
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000190926	retained_intron		9	-1	104157109	453
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000152830	protein_coding	principal2	17	-1	51815004	5993
ENSMUSG00000040557	protein_coding	Mettl27	ENSMUST00000136246	protein_coding		5	1	134932406	707
ENSMUSG00000021643	protein_coding	Serf1	ENSMUST00000022145	protein_coding	principal1	13	1	100108012	601
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000186788	protein_coding	alternative1	9	-1	104246827	6747
ENSMUSG00000083580	processed_pseudogene	Rpsa-ps3	ENSMUST00000117789	processed_pseudogene		11	1	22386292	876
ENSMUSG00000052033	protein_coding	Pfdn4	ENSMUST00000109147	protein_coding		2	1	170512558	445
ENSMUSG00000052477	protein_coding	C130026I21Rik	ENSMUST00000093506	protein_coding	alternative2	1	-1	85270543	1948
ENSMUSG00000044566	protein_coding	Cage1	ENSMUST00000089840	protein_coding		13	-1	38037069	3449
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000126815	retained_intron		11	1	70970480	434
ENSMUSG00000040557	protein_coding	Mettl27	ENSMUST00000201847	protein_coding		5	1	134932524	721
ENSMUSG00000029276	protein_coding	Glmn	ENSMUST00000124546	nonsense_mediated_decay		5	-1	107597544	2042
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000136665	retained_intron		11	1	70970486	688
ENSMUSG00000091160	antisense	Gm17133	ENSMUST00000170636	antisense		17	-1	64754096	289
ENSMUSG00000040502	protein_coding	Marchf9	ENSMUST00000040307	protein_coding	principal1	10	-1	127060184	3037
ENSMUSG00000085856	lincRNA	Gm12050	ENSMUST00000127483	lincRNA		11	-1	22439775	615
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000188885	nonsense_mediated_decay		9	-1	104162780	492
ENSMUSG00000024614	protein_coding	Tmx3	ENSMUST00000235708	protein_coding		18	1	90510155	343
ENSMUSG00000021643	protein_coding	Serf1	ENSMUST00000132053	protein_coding		13	1	100108085	516
ENSMUSG00000052033	protein_coding	Pfdn4	ENSMUST00000139328	protein_coding		2	1	170514890	1041
ENSMUSG00000044566	protein_coding	Cage1	ENSMUST00000131066	protein_coding		13	-1	38036937	1226
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000129531	retained_intron		11	1	70970491	745
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000140979	protein_coding	alternative2	17	-1	51812680	3748
ENSMUSG00000027378	protein_coding	Nphp1	ENSMUST00000110357	protein_coding	alternative2	2	-1	127788897	2296
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000188998	protein_coding		9	-1	104165072	614
ENSMUSG00000024614	protein_coding	Tmx3	ENSMUST00000235634	protein_coding	alternative2	18	1	90510197	3520
ENSMUSG00000085021	lincRNA	Gm12051	ENSMUST00000147771	lincRNA		11	1	22483608	1341
ENSMUSG00000040557	protein_coding	Mettl27	ENSMUST00000136815	processed_transcript		5	1	134932784	750
ENSMUSG00000021643	protein_coding	Serf1	ENSMUST00000129014	protein_coding	principal1	13	1	100108155	543
ENSMUSG00000044566	protein_coding	Cage1	ENSMUST00000074969	protein_coding	principal1	13	-1	38036937	2856
ENSMUSG00000049476	lincRNA	1700104B16Rik	ENSMUST00000079376	lincRNA		8	-1	33731814	570
ENSMUSG00000029276	protein_coding	Glmn	ENSMUST00000148505	processed_transcript		5	-1	107597566	815
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000188425	retained_intron		9	-1	104168018	3237
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000137697	retained_intron		17	-1	51742266	646
ENSMUSG00000027378	protein_coding	Nphp1	ENSMUST00000148033	retained_intron		2	-1	127754070	559
ENSMUSG00000029276	protein_coding	Glmn	ENSMUST00000143113	processed_transcript		5	-1	107597639	417
ENSMUSG00000049476	lincRNA	1700104B16Rik	ENSMUST00000187948	lincRNA		8	-1	33731819	722
ENSMUSG00000102644	transcribed_unitary_pseudogene	Thap6	ENSMUST00000193925	retained_intron		5	1	91962389	1337
ENSMUSG00000029276	protein_coding	Glmn	ENSMUST00000124140	protein_coding		5	-1	107597546	593
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000191199	retained_intron		9	-1	104186935	615
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000140727	processed_transcript		17	-1	51809132	625
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000161032	nonsense_mediated_decay		1	-1	135430458	4226
ENSMUSG00000040557	protein_coding	Mettl27	ENSMUST00000148286	protein_coding		5	1	134940462	573
ENSMUSG00000052477	protein_coding	C130026I21Rik	ENSMUST00000064341	protein_coding	principal3	1	-1	85270566	1561
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000129205	protein_coding		17	-1	51821091	813
ENSMUSG00000021643	protein_coding	Serf1	ENSMUST00000151821	protein_coding		13	1	100108341	570
ENSMUSG00000068999	protein_coding	Vmn2r5	ENSMUST00000177184	protein_coding	alternative2	3	-1	64509842	5055
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000178822	protein_coding		11	1	70970507	566
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000209534	retained_intron		8	1	45507788	2578
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000124222	protein_coding		17	-1	51832019	469
ENSMUSG00000102644	transcribed_unitary_pseudogene	Thap6	ENSMUST00000192939	processed_transcript		5	1	91962890	650
ENSMUSG00000021643	protein_coding	Serf1	ENSMUST00000152286	protein_coding		13	1	100108396	465
ENSMUSG00000038485	protein_coding	Socs7	ENSMUST00000238729	protein_coding		11	1	97362435	7131
ENSMUSG00000108396	processed_pseudogene	Gm6905	ENSMUST00000205729	processed_pseudogene		7	1	123010112	511
ENSMUSG00000068999	protein_coding	Vmn2r5	ENSMUST00000170270	protein_coding	principal2	3	-1	64507685	2484
ENSMUSG00000102644	transcribed_unitary_pseudogene	Thap6	ENSMUST00000192174	processed_transcript		5	1	91962904	1996
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000171254	nonsense_mediated_decay		11	1	70970507	548
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000146414	retained_intron		17	-1	51810919	3840
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000185503	nonsense_mediated_decay		9	-1	104201951	1222
ENSMUSG00000097022	antisense	BC001981	ENSMUST00000191393	antisense		13	-1	100108339	1545
ENSMUSG00000097022	antisense	BC001981	ENSMUST00000180822	antisense		13	-1	100108337	303
ENSMUSG00000118618	transcribed_unprocessed_pseudogene	AC123856.1	ENSMUST00000160058	processed_transcript		1	1	85199613	1142
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000108529	protein_coding		11	1	70970507	282
ENSMUSG00000102644	transcribed_unitary_pseudogene	Thap6	ENSMUST00000191860	transcribed_unitary_pseudogene		5	1	91963333	3151
ENSMUSG00000118618	transcribed_unprocessed_pseudogene	AC123856.1	ENSMUST00000239303	transcribed_unprocessed_pseudogene		1	1	85199697	195
ENSMUSG00000038485	protein_coding	Socs7	ENSMUST00000149212	processed_transcript		11	1	97377437	506
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000148559	protein_coding		17	-1	51826588	570
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000169965	protein_coding		11	1	70970507	343
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000156051	retained_intron		17	-1	51829497	4857
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000167509	protein_coding		11	1	70970507	519
ENSMUSG00000038485	protein_coding	Socs7	ENSMUST00000045540	protein_coding	principal1	11	1	97362551	7015
ENSMUSG00000050786	protein_coding	Ccdc126	ENSMUST00000055559	protein_coding	principal1	6	1	49319274	2351
ENSMUSG00000023927	protein_coding	Satb1	ENSMUST00000169480	protein_coding	principal2	17	-1	51826588	6194
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000189103	retained_intron		9	-1	104200483	641
ENSMUSG00000024614	protein_coding	Tmx3	ENSMUST00000236213	retained_intron		18	1	90510202	1776
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000151608	retained_intron		11	1	70970529	764
ENSMUSG00000079457	protein_coding	Gm7609	ENSMUST00000161424	protein_coding	principal1	1	1	85199613	1193
ENSMUSG00000106452	processed_pseudogene	Gm43749	ENSMUST00000199345	processed_pseudogene		3	-1	114544772	352
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000146788	retained_intron		11	1	70972803	421
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000188592	retained_intron		9	-1	104203347	734
ENSMUSG00000050786	protein_coding	Ccdc126	ENSMUST00000114491	protein_coding		6	1	49319307	2372
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000190600	retained_intron		9	-1	104228993	526
ENSMUSG00000027713	protein_coding	1810062G17Rik	ENSMUST00000029268	protein_coding	principal1	3	1	36475937	911
ENSMUSG00000024614	protein_coding	Tmx3	ENSMUST00000235132	retained_intron		18	1	90510204	2863
ENSMUSG00000079457	protein_coding	Gm7609	ENSMUST00000113402	protein_coding	principal1	1	1	85199708	1538
ENSMUSG00000032560	protein_coding	Dnajc13	ENSMUST00000189299	retained_intron		9	-1	104262903	568
ENSMUSG00000018449	protein_coding	Rpain	ENSMUST00000129540	retained_intron		11	1	70974740	445
ENSMUSG00000108520	processed_transcript	Gm44684	ENSMUST00000205388	processed_transcript		7	-1	27677844	2926
ENSMUSG00000024614	protein_coding	Tmx3	ENSMUST00000237852	retained_intron		18	1	90510272	1968
ENSMUSG00000029917	protein_coding	Qrfprl	ENSMUST00000133352	protein_coding		6	1	65381105	674
ENSMUSG00000038871	protein_coding	Bpgm	ENSMUST00000045372	protein_coding	principal1	6	1	34476207	2220
ENSMUSG00000110714	unprocessed_pseudogene	Gm45910	ENSMUST00000212493	unprocessed_pseudogene		8	-1	93154116	1003
ENSMUSG00000038871	protein_coding	Bpgm	ENSMUST00000135743	retained_intron		6	1	34476356	1861
ENSMUSG00000108469	lincRNA	Gm45054	ENSMUST00000206525	lincRNA		7	-1	64040826	342
ENSMUSG00000024614	protein_coding	Tmx3	ENSMUST00000236602	nonsense_mediated_decay		18	1	90532997	647
ENSMUSG00000038871	protein_coding	Bpgm	ENSMUST00000138668	protein_coding		6	1	34476452	596
ENSMUSG00000024614	protein_coding	Tmx3	ENSMUST00000236081	retained_intron		18	1	90537054	465
ENSMUSG00000112964	lincRNA	E430024I08Rik	ENSMUST00000099446	lincRNA		13	-1	74462689	1332
ENSMUSG00000038871	protein_coding	Bpgm	ENSMUST00000139067	protein_coding		6	1	34476479	604
ENSMUSG00000112964	lincRNA	E430024I08Rik	ENSMUST00000223312	lincRNA		13	-1	74443994	1573
ENSMUSG00000112964	lincRNA	E430024I08Rik	ENSMUST00000222130	lincRNA		13	-1	74438849	1321
ENSMUSG00000112964	lincRNA	E430024I08Rik	ENSMUST00000222455	lincRNA		13	-1	74462719	1614
ENSMUSG00000112964	lincRNA	E430024I08Rik	ENSMUST00000221334	lincRNA		13	-1	74462695	1440
ENSMUSG00000112964	lincRNA	E430024I08Rik	ENSMUST00000220632	lincRNA		13	-1	74463429	1513
ENSMUSG00000038871	protein_coding	Bpgm	ENSMUST00000149131	protein_coding		6	1	34477142	596
ENSMUSG00000112964	lincRNA	E430024I08Rik	ENSMUST00000221869	lincRNA		13	-1	74462693	1200
ENSMUSG00000112964	lincRNA	E430024I08Rik	ENSMUST00000222743	lincRNA		13	-1	74463351	739
ENSMUSG00000107227	TEC	Gm42559	ENSMUST00000201811	TEC		5	1	34469664	3532
ENSMUSG00000113212	processed_pseudogene	Gm47435	ENSMUST00000221116	processed_pseudogene		13	1	74440166	367
ENSMUSG00000024137	protein_coding	E4f1	ENSMUST00000227293	retained_intron		17	-1	24455286	2708
ENSMUSG00000117325	processed_pseudogene	Gm49962	ENSMUST00000233669	processed_pseudogene		17	1	12280117	418
ENSMUSG00000108620	lincRNA	Gm20670	ENSMUST00000206468	lincRNA		7	1	64057602	338
ENSMUSG00000116765	lincRNA	Gm49762	ENSMUST00000231729	lincRNA		13	1	74474643	544
ENSMUSG00000107704	lincRNA	Gm36355	ENSMUST00000203752	lincRNA		6	-1	115536900	639
ENSMUSG00000049904	protein_coding	Tmem17	ENSMUST00000059319	protein_coding	principal1	11	1	22512088	1568
ENSMUSG00000001229	protein_coding	Dpp9	ENSMUST00000038794	protein_coding	principal1	17	-1	56218889	3374
ENSMUSG00000089798	protein_coding	1700028K03Rik	ENSMUST00000058921	protein_coding	alternative2	5	1	107534709	797
ENSMUSG00000029917	protein_coding	Qrfprl	ENSMUST00000170608	protein_coding	principal1	6	1	65381294	2953
ENSMUSG00000031133	protein_coding	Arhgef6	ENSMUST00000033468	protein_coding	principal1	X	-1	57338729	4569
ENSMUSG00000022911	protein_coding	Arl13b	ENSMUST00000089289	protein_coding	principal1	16	-1	62847040	3528
ENSMUSG00000029917	protein_coding	Qrfprl	ENSMUST00000136016	protein_coding		6	1	65441304	347
ENSMUSG00000001229	protein_coding	Dpp9	ENSMUST00000233586	retained_intron		17	-1	56218905	3720
ENSMUSG00000031133	protein_coding	Arhgef6	ENSMUST00000114735	protein_coding		X	-1	57281594	1614
ENSMUSG00000107596	processed_pseudogene	Gm18913	ENSMUST00000204311	processed_pseudogene		6	1	65432160	1789
ENSMUSG00000031133	protein_coding	Arhgef6	ENSMUST00000175900	protein_coding		X	-1	57251344	748
ENSMUSG00000022911	protein_coding	Arl13b	ENSMUST00000141665	processed_transcript		16	-1	62802836	473
ENSMUSG00000023031	protein_coding	Cela1	ENSMUST00000230572	protein_coding		15	-1	100681962	762
ENSMUSG00000107584	processed_pseudogene	Gm18716	ENSMUST00000204507	processed_pseudogene		6	1	65416020	1603
ENSMUSG00000089798	protein_coding	1700028K03Rik	ENSMUST00000163064	processed_transcript		5	1	107534720	3191
ENSMUSG00000022911	protein_coding	Arl13b	ENSMUST00000232561	protein_coding		16	-1	62846993	867
ENSMUSG00000002015	protein_coding	Bcap31	ENSMUST00000002091	protein_coding	principal1	X	-1	73716175	1219
ENSMUSG00000022911	protein_coding	Arl13b	ENSMUST00000132902	retained_intron		16	-1	62847040	2236
ENSMUSG00000089798	protein_coding	1700028K03Rik	ENSMUST00000159902	protein_coding	alternative2	5	1	107534737	742
ENSMUSG00000024085	protein_coding	Man2a1	ENSMUST00000086723	protein_coding	principal1	17	1	64600736	6991
ENSMUSG00000097537	antisense	2610020C07Rik	ENSMUST00000181526	antisense		16	1	11203366	2942
ENSMUSG00000024968	protein_coding	Rcor2	ENSMUST00000140442	protein_coding		19	1	7267325	439
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000161189	nonsense_mediated_decay		1	-1	135430491	4189
ENSMUSG00000105225	processed_pseudogene	Gm19147	ENSMUST00000199622	processed_pseudogene		3	-1	114828671	652
ENSMUSG00000089798	protein_coding	1700028K03Rik	ENSMUST00000162591	retained_intron		5	1	107534757	5249
ENSMUSG00000013858	protein_coding	Tmem259	ENSMUST00000052885	protein_coding	principal1	10	-1	79984330	2225
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000161934	protein_coding		1	-1	135388594	800
ENSMUSG00000024085	protein_coding	Man2a1	ENSMUST00000169239	retained_intron		17	1	64713420	470
ENSMUSG00000024085	protein_coding	Man2a1	ENSMUST00000169668	protein_coding		17	1	64713619	867
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000161750	retained_intron		1	-1	135388549	808
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000135890	processed_transcript		2	-1	121211975	2552
ENSMUSG00000047854	protein_coding	Stx19	ENSMUST00000055557	protein_coding	principal1	16	1	62814676	2812
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000162858	retained_intron		1	-1	135388700	843
ENSMUSG00000034064	protein_coding	Poglut1	ENSMUST00000036210	protein_coding	principal1	16	-1	38550258	2758
ENSMUSG00000097537	antisense	2610020C07Rik	ENSMUST00000230166	antisense		16	1	11203695	517
ENSMUSG00000089798	protein_coding	1700028K03Rik	ENSMUST00000238787	protein_coding	alternative2	5	1	107534711	3096
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000159487	retained_intron		1	-1	135387559	600
ENSMUSG00000089798	protein_coding	1700028K03Rik	ENSMUST00000239050	protein_coding	principal3	5	1	107534711	795
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000159089	retained_intron		1	-1	135389793	543
ENSMUSG00000013858	protein_coding	Tmem259	ENSMUST00000124536	protein_coding		10	-1	79984040	1767
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000161258	processed_transcript		1	-1	135403364	599
ENSMUSG00000097537	antisense	2610020C07Rik	ENSMUST00000229756	antisense		16	1	11203695	566
ENSMUSG00000071074	protein_coding	Yipf3	ENSMUST00000095263	protein_coding	principal1	17	1	46248080	2035
ENSMUSG00000031207	protein_coding	Msn	ENSMUST00000117399	protein_coding	principal1	X	1	96096042	3842
ENSMUSG00000097537	antisense	2610020C07Rik	ENSMUST00000230245	antisense		16	1	11203695	722
ENSMUSG00000013858	protein_coding	Tmem259	ENSMUST00000124889	retained_intron		10	-1	79978776	727
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000159017	retained_intron		1	-1	135403455	666
ENSMUSG00000024644	protein_coding	Cndp2	ENSMUST00000025546	protein_coding	principal1	18	-1	84685702	2124
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000161838	nonsense_mediated_decay		1	-1	135430433	810
ENSMUSG00000031133	protein_coding	Arhgef6	ENSMUST00000176986	protein_coding		X	-1	57326599	1604
ENSMUSG00000111375	protein_coding	Btbd8	ENSMUST00000162298	protein_coding		5	1	107437997	1408
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000161704	retained_intron		1	-1	135407140	849
ENSMUSG00000023349	protein_coding	Clec4n	ENSMUST00000112554	protein_coding	alternative2	6	1	123229843	1140
ENSMUSG00000071074	protein_coding	Yipf3	ENSMUST00000123311	protein_coding		17	1	46248125	734
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000161135	retained_intron		1	-1	135420042	760
ENSMUSG00000090581	protein_coding	Vmn2r6	ENSMUST00000176481	protein_coding	alternative2	3	-1	64565830	9525
ENSMUSG00000041879	protein_coding	Ipo9	ENSMUST00000159173	nonsense_mediated_decay		1	-1	135430419	777
ENSMUSG00000037210	protein_coding	Fam193a	ENSMUST00000180376	protein_coding	principal5	5	1	34369933	5536
ENSMUSG00000021381	protein_coding	Barx1	ENSMUST00000021813	protein_coding	principal1	13	1	48662998	1399
ENSMUSG00000031133	protein_coding	Arhgef6	ENSMUST00000134028	retained_intron		X	-1	57326601	2951
ENSMUSG00000111375	protein_coding	Btbd8	ENSMUST00000212858	retained_intron		5	1	107437997	1166
ENSMUSG00000090581	protein_coding	Vmn2r6	ENSMUST00000165012	protein_coding	principal2	3	-1	64559818	2484
ENSMUSG00000031133	protein_coding	Arhgef6	ENSMUST00000175636	processed_transcript		X	-1	57300859	675
ENSMUSG00000037210	protein_coding	Fam193a	ENSMUST00000202503	protein_coding		5	1	34431219	581
ENSMUSG00000031207	protein_coding	Msn	ENSMUST00000149985	processed_transcript		X	1	96096057	1883
ENSMUSG00000093699	unprocessed_pseudogene	Vmn2r-ps9	ENSMUST00000177446	unprocessed_pseudogene		3	-1	64592896	1099
ENSMUSG00000100620	sense_intronic	Gm28277	ENSMUST00000187450	sense_intronic		1	-1	135414186	885
ENSMUSG00000024644	protein_coding	Cndp2	ENSMUST00000168419	protein_coding	principal1	18	-1	84682059	2152
ENSMUSG00000037210	protein_coding	Fam193a	ENSMUST00000201005	protein_coding		5	1	34443722	385
ENSMUSG00000071074	protein_coding	Yipf3	ENSMUST00000151488	retained_intron		17	1	46248145	1570
ENSMUSG00000031133	protein_coding	Arhgef6	ENSMUST00000135098	retained_intron		X	-1	57338506	1301
ENSMUSG00000093484	unprocessed_pseudogene	Gm20657	ENSMUST00000177079	unprocessed_pseudogene		3	1	64596913	515
ENSMUSG00000071074	protein_coding	Yipf3	ENSMUST00000127378	protein_coding		17	1	46249029	841
ENSMUSG00000031207	protein_coding	Msn	ENSMUST00000135027	processed_transcript		X	1	96096097	1571
ENSMUSG00000037210	protein_coding	Fam193a	ENSMUST00000181379	protein_coding		5	1	34466129	2283
ENSMUSG00000095107	unprocessed_pseudogene	Vmn2r-ps10	ENSMUST00000176836	unprocessed_pseudogene		3	1	64621694	898
ENSMUSG00000071074	protein_coding	Yipf3	ENSMUST00000145371	processed_transcript		17	1	46250089	792
ENSMUSG00000020868	protein_coding	Xylt2	ENSMUST00000116349	protein_coding	principal1	11	-1	94677515	3442
ENSMUSG00000037210	protein_coding	Fam193a	ENSMUST00000094867	protein_coding	alternative2	5	1	34426337	3696
ENSMUSG00000071074	protein_coding	Yipf3	ENSMUST00000149989	processed_transcript		17	1	46251341	599
ENSMUSG00000098062	processed_pseudogene	Gm26931	ENSMUST00000182273	processed_pseudogene		5	-1	34482522	609
ENSMUSG00000020868	protein_coding	Xylt2	ENSMUST00000153485	nonsense_mediated_decay		11	-1	94677515	2510
ENSMUSG00000038567	protein_coding	Cyp24a1	ENSMUST00000038824	protein_coding	principal1	2	-1	170497145	3560
ENSMUSG00000034064	protein_coding	Poglut1	ENSMUST00000153187	retained_intron		16	-1	38550222	2922
ENSMUSG00000020868	protein_coding	Xylt2	ENSMUST00000150377	protein_coding		11	-1	94668192	437
ENSMUSG00000023031	protein_coding	Cela1	ENSMUST00000023775	protein_coding	principal1	15	-1	100687921	1108
ENSMUSG00000020868	protein_coding	Xylt2	ENSMUST00000154830	retained_intron		11	-1	94667802	643
ENSMUSG00000034064	protein_coding	Poglut1	ENSMUST00000149704	retained_intron		16	-1	38532494	862
ENSMUSG00000020868	protein_coding	Xylt2	ENSMUST00000146693	nonsense_mediated_decay		11	-1	94677407	610
ENSMUSG00000034064	protein_coding	Poglut1	ENSMUST00000148093	retained_intron		16	-1	38537967	787
ENSMUSG00000023031	protein_coding	Cela1	ENSMUST00000230740	protein_coding		15	-1	100681583	887
ENSMUSG00000034064	protein_coding	Poglut1	ENSMUST00000137762	retained_intron		16	-1	38550222	996
ENSMUSG00000020868	protein_coding	Xylt2	ENSMUST00000174178	processed_transcript		11	-1	94677413	450
ENSMUSG00000112400	lincRNA	Gm47725	ENSMUST00000218392	lincRNA		10	1	95893443	858
ENSMUSG00000085320	lincRNA	Gm11548	ENSMUST00000140203	lincRNA		3	-1	36506809	2199
ENSMUSG00000024644	protein_coding	Cndp2	ENSMUST00000236415	processed_transcript		18	-1	84680740	1956
ENSMUSG00000028035	protein_coding	Dnajb4	ENSMUST00000134701	processed_transcript		3	-1	152210279	1581
ENSMUSG00000024644	protein_coding	Cndp2	ENSMUST00000237533	processed_transcript		18	-1	84676678	981
ENSMUSG00000024644	protein_coding	Cndp2	ENSMUST00000236029	retained_intron		18	-1	84675208	785
ENSMUSG00000023031	protein_coding	Cela1	ENSMUST00000229869	protein_coding		15	-1	100678862	662
ENSMUSG00000024644	protein_coding	Cndp2	ENSMUST00000235534	processed_transcript		18	-1	84680840	356
ENSMUSG00000023031	protein_coding	Cela1	ENSMUST00000230744	protein_coding		15	-1	100679066	443
ENSMUSG00000024644	protein_coding	Cndp2	ENSMUST00000236125	protein_coding		18	-1	84684862	797
ENSMUSG00000062200	protein_coding	Vmn2r7	ENSMUST00000233255	protein_coding	alternative2	3	-1	64770657	9253
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000223610	protein_coding		17	1	69075683	559
ENSMUSG00000024644	protein_coding	Cndp2	ENSMUST00000237605	protein_coding		18	-1	84684384	123
ENSMUSG00000023031	protein_coding	Cela1	ENSMUST00000229235	processed_transcript		15	-1	100683119	456
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000225062	protein_coding		17	1	69075752	666
ENSMUSG00000024968	protein_coding	Rcor2	ENSMUST00000066646	protein_coding	principal1	19	1	7268279	2823
ENSMUSG00000062200	protein_coding	Vmn2r7	ENSMUST00000161972	protein_coding	alternative2	3	-1	64844765	9199
ENSMUSG00000024644	protein_coding	Cndp2	ENSMUST00000235149	retained_intron		18	-1	84685627	1669
ENSMUSG00000023031	protein_coding	Cela1	ENSMUST00000230312	protein_coding		15	-1	100685169	600
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000092266	protein_coding	alternative2	10	1	82629828	2959
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000081794	protein_coding	principal1	11	1	49244246	2976
ENSMUSG00000106958	processed_pseudogene	Gm35960	ENSMUST00000202712	processed_pseudogene		5	-1	73397813	767
ENSMUSG00000062200	protein_coding	Vmn2r7	ENSMUST00000050123	retained_intron		3	-1	64844765	2299
ENSMUSG00000024968	protein_coding	Rcor2	ENSMUST00000134167	retained_intron		19	1	7270952	644
ENSMUSG00000023031	protein_coding	Cela1	ENSMUST00000229888	retained_intron		15	-1	100685364	360
ENSMUSG00000023031	protein_coding	Cela1	ENSMUST00000230642	retained_intron		15	-1	100687915	474
ENSMUSG00000062200	protein_coding	Vmn2r7	ENSMUST00000168072	protein_coding	principal2	3	-1	64719602	2484
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000135489	processed_transcript		11	1	49244409	315
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000152451	processed_transcript		11	1	49244567	422
ENSMUSG00000000959	protein_coding	Oxa1l	ENSMUST00000228567	retained_intron		14	1	54360834	1059
ENSMUSG00000093434	transcribed_unprocessed_pseudogene	Vmn2r-ps11	ENSMUST00000176568	transcribed_unprocessed_pseudogene		3	-1	64662261	2730
ENSMUSG00000024968	protein_coding	Rcor2	ENSMUST00000113369	protein_coding		19	1	7269764	2013
ENSMUSG00000035745	protein_coding	Grin3b	ENSMUST00000045085	protein_coding	principal1	10	1	79970715	3283
ENSMUSG00000002910	protein_coding	Arrdc2	ENSMUST00000213095	retained_intron		8	-1	70836587	1459
ENSMUSG00000086256	lincRNA	Gm12052	ENSMUST00000142151	lincRNA		11	1	22617408	933
ENSMUSG00000035745	protein_coding	Grin3b	ENSMUST00000149148	protein_coding		10	1	79973737	1637
ENSMUSG00000000959	protein_coding	Oxa1l	ENSMUST00000198107	retained_intron		14	1	54360841	1438
ENSMUSG00000083008	processed_pseudogene	Gm12053	ENSMUST00000119022	processed_pseudogene		11	-1	22626664	252
ENSMUSG00000097538	processed_transcript	Gm26939	ENSMUST00000177146	processed_transcript		3	-1	64844743	2261
ENSMUSG00000040706	protein_coding	Agmat	ENSMUST00000038161	protein_coding	principal1	4	1	141746672	1407
ENSMUSG00000035745	protein_coding	Grin3b	ENSMUST00000131816	protein_coding		10	1	79974409	1197
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000231386	nonsense_mediated_decay		16	-1	20610755	1309
ENSMUSG00000093474	unprocessed_pseudogene	Vmn2r-ps12	ENSMUST00000175833	unprocessed_pseudogene		3	-1	64745645	623
ENSMUSG00000028691	protein_coding	Prdx1	ENSMUST00000135573	protein_coding	principal1	4	1	116685544	2294
ENSMUSG00000085187	lincRNA	Gm13860	ENSMUST00000125185	lincRNA		6	1	34533553	452
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000151390	protein_coding	principal3	10	1	82629859	3502
ENSMUSG00000023349	protein_coding	Clec4n	ENSMUST00000024118	protein_coding	principal3	6	1	123229854	1229
ENSMUSG00000028691	protein_coding	Prdx1	ENSMUST00000156145	retained_intron		4	1	116685599	553
ENSMUSG00000028691	protein_coding	Prdx1	ENSMUST00000151129	protein_coding		4	1	116685599	611
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000133227	processed_transcript		10	1	82629876	1244
ENSMUSG00000050188	protein_coding	Lsm10	ENSMUST00000055575	protein_coding	principal1	4	1	126096623	943
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000145370	protein_coding		10	1	82630667	709
ENSMUSG00000028691	protein_coding	Prdx1	ENSMUST00000129315	protein_coding		4	1	116685861	661
ENSMUSG00000040705	antisense	A930016O22Rik	ENSMUST00000208685	antisense		7	-1	19421417	2349
ENSMUSG00000028691	protein_coding	Prdx1	ENSMUST00000106470	protein_coding	principal1	4	1	116685887	877
ENSMUSG00000050188	protein_coding	Lsm10	ENSMUST00000151831	protein_coding		4	1	126096660	352
ENSMUSG00000038271	protein_coding	Iffo1	ENSMUST00000119527	protein_coding	alternative2	6	1	125145241	2840
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000148790	retained_intron		10	1	82641162	602
ENSMUSG00000023349	protein_coding	Clec4n	ENSMUST00000144840	processed_transcript		6	1	123229857	362
ENSMUSG00000028691	protein_coding	Prdx1	ENSMUST00000030454	protein_coding		4	1	116687312	636
ENSMUSG00000040705	antisense	A930016O22Rik	ENSMUST00000047020	antisense		7	-1	19421417	1214
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000176195	nonsense_mediated_decay		10	1	82641440	1016
ENSMUSG00000050188	protein_coding	Lsm10	ENSMUST00000179323	protein_coding	principal1	4	1	126096653	808
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000177353	protein_coding		10	1	82641441	736
ENSMUSG00000030399	protein_coding	Ckm	ENSMUST00000208079	processed_transcript		7	1	19404776	671
ENSMUSG00000030670	protein_coding	Cyp2r1	ENSMUST00000211506	protein_coding		7	-1	114562890	1887
ENSMUSG00000023349	protein_coding	Clec4n	ENSMUST00000117130	protein_coding	alternative2	6	1	123229857	1136
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000135652	retained_intron		10	1	82644024	412
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000156607	processed_transcript		11	1	49245231	633
ENSMUSG00000111375	protein_coding	Btbd8	ENSMUST00000211896	protein_coding	principal1	5	1	107437997	5256
ENSMUSG00000002910	protein_coding	Arrdc2	ENSMUST00000002989	protein_coding	principal1	8	-1	70839720	2355
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000125970	retained_intron		10	1	82644438	571
ENSMUSG00000028035	protein_coding	Dnajb4	ENSMUST00000050073	protein_coding	principal1	3	-1	152193845	2464
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000238997	protein_coding		8	-1	83574842	1334
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000176326	protein_coding		10	1	82644478	971
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000109194	protein_coding	principal1	11	1	49247477	2480
ENSMUSG00000002910	protein_coding	Arrdc2	ENSMUST00000212898	retained_intron		8	-1	70837695	1860
ENSMUSG00000034674	protein_coding	Tdg	ENSMUST00000142658	retained_intron		10	1	82646905	773
ENSMUSG00000111375	protein_coding	Btbd8	ENSMUST00000100951	protein_coding		5	1	107497378	4545
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000109986	protein_coding	principal2	2	-1	146512004	11030
ENSMUSG00000023349	protein_coding	Clec4n	ENSMUST00000151714	nonsense_mediated_decay		6	1	123229857	1404
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000155806	processed_transcript		11	1	49247483	426
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000228797	protein_coding	alternative2	2	-1	146512344	8245
ENSMUSG00000111375	protein_coding	Btbd8	ENSMUST00000152474	protein_coding		5	1	107497776	1256
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000149499	protein_coding		2	-1	146447292	5686
ENSMUSG00000023349	protein_coding	Clec4n	ENSMUST00000205129	protein_coding		6	1	123230018	363
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000148962	processed_transcript		11	1	49248957	341
ENSMUSG00000038271	protein_coding	Iffo1	ENSMUST00000144364	nonsense_mediated_decay		6	1	125145241	3013
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000124583	processed_transcript		2	-1	146261375	1194
ENSMUSG00000099950	lincRNA	9130227L01Rik	ENSMUST00000189293	lincRNA		1	1	55931241	1906
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000131824	protein_coding	alternative2	2	-1	146511899	5624
ENSMUSG00000111375	protein_coding	Btbd8	ENSMUST00000060553	protein_coding		5	1	107497779	2439
ENSMUSG00000099950	lincRNA	9130227L01Rik	ENSMUST00000188040	lincRNA		1	1	55960914	1636
ENSMUSG00000102491	TEC	Gm36986	ENSMUST00000195320	TEC		1	-1	55960756	353
ENSMUSG00000028035	protein_coding	Dnajb4	ENSMUST00000144950	protein_coding	principal1	3	-1	152210083	2459
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000101293	protein_coding	principal1	11	1	49250512	2729
ENSMUSG00000002910	protein_coding	Arrdc2	ENSMUST00000212770	retained_intron		8	-1	70837740	855
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000146307	nonsense_mediated_decay		2	-1	146387683	3095
ENSMUSG00000028007	protein_coding	Snx7	ENSMUST00000029639	protein_coding		3	-1	117868936	2021
ENSMUSG00000038271	protein_coding	Iffo1	ENSMUST00000139071	retained_intron		6	1	125145241	4233
ENSMUSG00000111375	protein_coding	Btbd8	ENSMUST00000133800	processed_transcript		5	1	107503943	711
ENSMUSG00000100372	lincRNA	1700003I22Rik	ENSMUST00000186048	lincRNA		1	1	56018978	424
ENSMUSG00000036093	protein_coding	Arl5a	ENSMUST00000036541	protein_coding	principal1	2	-1	52424901	5239
ENSMUSG00000111375	protein_coding	Btbd8	ENSMUST00000094541	protein_coding		5	1	107437997	1134
ENSMUSG00000002910	protein_coding	Arrdc2	ENSMUST00000212405	protein_coding		8	-1	70839660	372
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000148784	retained_intron		2	-1	146406283	2704
ENSMUSG00000028007	protein_coding	Snx7	ENSMUST00000169812	protein_coding		3	-1	117868880	1588
ENSMUSG00000100372	lincRNA	1700003I22Rik	ENSMUST00000190280	lincRNA		1	1	56019023	371
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000149406	processed_transcript		11	1	49250565	402
ENSMUSG00000002910	protein_coding	Arrdc2	ENSMUST00000212508	retained_intron		8	-1	70839518	803
ENSMUSG00000089628	processed_pseudogene	Gm9727	ENSMUST00000161387	processed_pseudogene		5	-1	107479080	555
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000129541	processed_transcript		11	1	49250572	310
ENSMUSG00000100944	processed_pseudogene	Gm28900	ENSMUST00000185232	processed_pseudogene		1	1	56451407	156
ENSMUSG00000028007	protein_coding	Snx7	ENSMUST00000198499	protein_coding	principal1	3	-1	117846708	1314
ENSMUSG00000002910	protein_coding	Arrdc2	ENSMUST00000212855	processed_transcript		8	-1	70839660	372
ENSMUSG00000028136	protein_coding	Snx27	ENSMUST00000029783	protein_coding		3	-1	94582716	6261
ENSMUSG00000028035	protein_coding	Dnajb4	ENSMUST00000029669	protein_coding	principal1	3	-1	152210019	1497
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000129588	protein_coding		11	1	49250590	787
ENSMUSG00000028007	protein_coding	Snx7	ENSMUST00000167877	protein_coding		3	-1	117868821	1089
ENSMUSG00000036093	protein_coding	Arl5a	ENSMUST00000130357	retained_intron		2	-1	52412315	452
ENSMUSG00000074652	protein_coding	Myh7b	ENSMUST00000092995	protein_coding	principal1	2	1	155611212	6163
ENSMUSG00000028007	protein_coding	Snx7	ENSMUST00000196421	retained_intron		3	-1	117831274	4201
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000135314	processed_transcript		11	1	49256244	635
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000146024	retained_intron		2	-1	146412876	651
ENSMUSG00000038271	protein_coding	Iffo1	ENSMUST00000117675	protein_coding	principal4	6	1	125145251	2833
ENSMUSG00000030670	protein_coding	Cyp2r1	ENSMUST00000032908	protein_coding	principal1	7	-1	114562972	1627
ENSMUSG00000117176	processed_pseudogene	Gm49879	ENSMUST00000232819	processed_pseudogene		17	1	56238909	453
ENSMUSG00000085900	antisense	A930041C12Rik	ENSMUST00000149156	antisense		5	-1	107633850	537
ENSMUSG00000028035	protein_coding	Dnajb4	ENSMUST00000153355	processed_transcript		3	-1	152210057	579
ENSMUSG00000117172	lincRNA	A230051N06Rik	ENSMUST00000233314	lincRNA		17	1	56241716	749
ENSMUSG00000020346	protein_coding	Mgat1	ENSMUST00000167400	protein_coding	principal1	11	1	49244191	3151
ENSMUSG00000028035	protein_coding	Dnajb4	ENSMUST00000197941	protein_coding		3	-1	152210057	325
ENSMUSG00000074652	protein_coding	Myh7b	ENSMUST00000124415	processed_transcript		2	1	155629060	667
ENSMUSG00000028136	protein_coding	Snx27	ENSMUST00000107283	protein_coding	principal1	3	-1	94582549	3531
ENSMUSG00000017776	protein_coding	Crk	ENSMUST00000017920	protein_coding	principal1	11	1	75679259	3642
ENSMUSG00000000959	protein_coding	Oxa1l	ENSMUST00000000985	protein_coding	principal1	14	1	54360841	2538
ENSMUSG00000074652	protein_coding	Myh7b	ENSMUST00000154656	retained_intron		2	1	155633451	674
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000163837	protein_coding		8	-1	83594429	1272
ENSMUSG00000028035	protein_coding	Dnajb4	ENSMUST00000196291	retained_intron		3	-1	152210302	4913
ENSMUSG00000117409	processed_pseudogene	Gm49996	ENSMUST00000234475	processed_pseudogene		17	1	92976521	277
ENSMUSG00000032059	protein_coding	Alg9	ENSMUST00000034561	protein_coding	principal1	9	1	50775019	2873
ENSMUSG00000117591	processed_pseudogene	Gm49997	ENSMUST00000234088	processed_pseudogene		17	1	93168512	328
ENSMUSG00000017776	protein_coding	Crk	ENSMUST00000108426	protein_coding		11	1	75679284	671
ENSMUSG00000030670	protein_coding	Cyp2r1	ENSMUST00000138712	nonsense_mediated_decay		7	-1	114562970	995
ENSMUSG00000117559	processed_pseudogene	Gm49998	ENSMUST00000234694	processed_pseudogene		17	-1	93192623	226
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000019382	protein_coding	principal1	8	-1	83594477	1158
ENSMUSG00000043683	protein_coding	Fem1a	ENSMUST00000060253	protein_coding	principal1	17	1	56256810	6801
ENSMUSG00000030670	protein_coding	Cyp2r1	ENSMUST00000119712	protein_coding		7	-1	114562962	917
ENSMUSG00000000959	protein_coding	Oxa1l	ENSMUST00000196882	retained_intron		14	1	54361045	801
ENSMUSG00000028136	protein_coding	Snx27	ENSMUST00000196675	processed_transcript		3	-1	94524291	734
ENSMUSG00000000959	protein_coding	Oxa1l	ENSMUST00000228719	protein_coding		14	1	54367631	710
ENSMUSG00000030670	protein_coding	Cyp2r1	ENSMUST00000128587	nonsense_mediated_decay		7	-1	114554732	1070
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000165740	protein_coding		8	-1	83594484	1120
ENSMUSG00000025201	processed_pseudogene	Bloc1s2-ps	ENSMUST00000183232	processed_pseudogene		2	1	52619754	432
ENSMUSG00000030670	protein_coding	Cyp2r1	ENSMUST00000133484	processed_transcript		7	-1	114554736	901
ENSMUSG00000032059	protein_coding	Alg9	ENSMUST00000162073	nonsense_mediated_decay		9	1	50775305	2530
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000212187	retained_intron		8	-1	83572611	657
ENSMUSG00000038271	protein_coding	Iffo1	ENSMUST00000141230	retained_intron		6	1	125145266	3056
ENSMUSG00000030670	protein_coding	Cyp2r1	ENSMUST00000147428	nonsense_mediated_decay		7	-1	114562962	894
ENSMUSG00000038271	protein_coding	Iffo1	ENSMUST00000148835	protein_coding		6	1	125145801	2283
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000212652	processed_transcript		8	-1	83572456	251
ENSMUSG00000028136	protein_coding	Snx27	ENSMUST00000199462	nonsense_mediated_decay		3	-1	94582679	2510
ENSMUSG00000030399	protein_coding	Ckm	ENSMUST00000208710	protein_coding	principal1	7	1	19411025	2742
ENSMUSG00000032059	protein_coding	Alg9	ENSMUST00000159576	protein_coding		9	1	50775367	704
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000212703	protein_coding		8	-1	83573252	451
ENSMUSG00000017776	protein_coding	Crk	ENSMUST00000108425	protein_coding		11	1	75679284	4290
ENSMUSG00000038271	protein_coding	Iffo1	ENSMUST00000135559	retained_intron		6	1	125146026	2868
ENSMUSG00000028136	protein_coding	Snx27	ENSMUST00000196251	processed_transcript		3	-1	94519091	599
ENSMUSG00000038271	protein_coding	Iffo1	ENSMUST00000150417	processed_transcript		6	1	125149007	436
ENSMUSG00000017776	protein_coding	Crk	ENSMUST00000093115	protein_coding		11	1	75679311	965
ENSMUSG00000028136	protein_coding	Snx27	ENSMUST00000200642	protein_coding		3	-1	94562032	1308
ENSMUSG00000032059	protein_coding	Alg9	ENSMUST00000162363	processed_transcript		9	1	50775546	780
ENSMUSG00000030399	protein_coding	Ckm	ENSMUST00000003643	protein_coding		7	1	19411063	1235
ENSMUSG00000038271	protein_coding	Iffo1	ENSMUST00000153006	retained_intron		6	1	125149528	476
ENSMUSG00000017776	protein_coding	Crk	ENSMUST00000147718	protein_coding		11	1	75679542	852
ENSMUSG00000032059	protein_coding	Alg9	ENSMUST00000162442	processed_transcript		9	1	50776109	586
ENSMUSG00000028136	protein_coding	Snx27	ENSMUST00000198426	nonsense_mediated_decay		3	-1	94561795	599
ENSMUSG00000085315	processed_transcript	A430018G15Rik	ENSMUST00000124210	processed_transcript		2	1	52425012	1314
ENSMUSG00000038271	protein_coding	Iffo1	ENSMUST00000150474	retained_intron		6	1	125153348	811
ENSMUSG00000032059	protein_coding	Alg9	ENSMUST00000177320	nonsense_mediated_decay		9	1	50802069	463
ENSMUSG00000028136	protein_coding	Snx27	ENSMUST00000198902	processed_transcript		3	-1	94531872	649
ENSMUSG00000032059	protein_coding	Alg9	ENSMUST00000175728	protein_coding		9	1	50808679	757
ENSMUSG00000085979	lincRNA	Gm12055	ENSMUST00000143643	lincRNA		11	-1	22732986	793
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000192506	retained_intron		6	-1	125165003	3289
ENSMUSG00000032059	protein_coding	Alg9	ENSMUST00000161200	processed_transcript		9	1	50823043	278
ENSMUSG00000031241	protein_coding	Tbx22	ENSMUST00000172682	nonsense_mediated_decay		X	1	107667964	633
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000109982	retained_intron		2	-1	146511911	3730
ENSMUSG00000085315	processed_transcript	A430018G15Rik	ENSMUST00000143821	processed_transcript		2	1	52425012	766
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000147954	retained_intron		6	-1	125162527	565
ENSMUSG00000032059	protein_coding	Alg9	ENSMUST00000162596	processed_transcript		9	1	50835571	465
ENSMUSG00000082132	processed_pseudogene	Gm13541	ENSMUST00000119519	processed_pseudogene		2	1	52551969	283
ENSMUSG00000085803	lincRNA	Gm12056	ENSMUST00000148364	lincRNA		11	1	22734038	1257
ENSMUSG00000020719	protein_coding	Ddx5	ENSMUST00000021062	protein_coding	principal1	11	-1	106788532	3559
ENSMUSG00000062203	protein_coding	Gspt1	ENSMUST00000167571	protein_coding	alternative2	16	-1	11254270	3716
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000135974	retained_intron		2	-1	146512004	4159
ENSMUSG00000037110	protein_coding	Ralgapa2	ENSMUST00000124709	retained_intron		2	-1	146512026	597
ENSMUSG00000020719	protein_coding	Ddx5	ENSMUST00000133426	nonsense_mediated_decay		11	-1	106788494	3593
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000212575	retained_intron		8	-1	83594421	804
ENSMUSG00000020719	protein_coding	Ddx5	ENSMUST00000127481	nonsense_mediated_decay		11	-1	106788488	879
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000212418	retained_intron		8	-1	83594477	734
ENSMUSG00000058290	protein_coding	Espl1	ENSMUST00000064924	protein_coding	principal1	15	1	102296266	6658
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000238861	protein_coding		8	-1	83574765	738
ENSMUSG00000020719	protein_coding	Ddx5	ENSMUST00000130172	processed_transcript		11	-1	106783651	589
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000212630	protein_coding		8	-1	83594477	399
ENSMUSG00000020719	protein_coding	Ddx5	ENSMUST00000106779	processed_transcript		11	-1	106788467	496
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000211972	processed_transcript		8	-1	83607971	378
ENSMUSG00000058290	protein_coding	Espl1	ENSMUST00000230212	protein_coding		15	1	102296294	657
ENSMUSG00000020719	protein_coding	Ddx5	ENSMUST00000106778	retained_intron		11	-1	106785046	708
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000212136	processed_transcript		8	-1	83594465	378
ENSMUSG00000020719	protein_coding	Ddx5	ENSMUST00000151741	processed_transcript		11	-1	106786050	810
ENSMUSG00000031708	protein_coding	Tecr	ENSMUST00000212285	retained_intron		8	-1	83594487	753
ENSMUSG00000058290	protein_coding	Espl1	ENSMUST00000229050	protein_coding	principal1	15	1	102296298	6635
ENSMUSG00000062203	protein_coding	Gspt1	ENSMUST00000080030	protein_coding	principal3	16	-1	11254209	2898
ENSMUSG00000058290	protein_coding	Espl1	ENSMUST00000231104	protein_coding		15	1	102296305	670
ENSMUSG00000058290	protein_coding	Espl1	ENSMUST00000230116	retained_intron		15	1	102316485	434
ENSMUSG00000062203	protein_coding	Gspt1	ENSMUST00000167025	protein_coding		16	-1	11224498	727
ENSMUSG00000098650	protein_coding	Commd1b	ENSMUST00000160826	protein_coding	principal1	11	-1	22982090	2746
ENSMUSG00000058290	protein_coding	Espl1	ENSMUST00000230617	retained_intron		15	1	102319110	2298
ENSMUSG00000092626	processed_transcript	9130230N09Rik	ENSMUST00000174568	processed_transcript		11	1	22858931	663
ENSMUSG00000082576	processed_pseudogene	Gm12058	ENSMUST00000118614	processed_pseudogene		11	-1	22787247	437
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000117757	protein_coding		6	-1	125166467	1273
ENSMUSG00000058290	protein_coding	Espl1	ENSMUST00000231207	retained_intron		15	1	102322372	544
ENSMUSG00000044068	protein_coding	Zrsr1	ENSMUST00000230879	processed_transcript		11	1	22973215	3282
ENSMUSG00000062203	protein_coding	Gspt1	ENSMUST00000164098	retained_intron		16	-1	11228517	836
ENSMUSG00000058290	protein_coding	Espl1	ENSMUST00000229942	nonsense_mediated_decay		15	1	102322665	447
ENSMUSG00000044068	protein_coding	Zrsr1	ENSMUST00000229075	transcribed_processed_pseudogene		11	1	22973228	1287
ENSMUSG00000020719	protein_coding	Ddx5	ENSMUST00000129585	protein_coding		11	-1	106789185	861
ENSMUSG00000044068	protein_coding	Zrsr1	ENSMUST00000049506	protein_coding	principal1	11	1	22972005	4492
ENSMUSG00000058290	protein_coding	Espl1	ENSMUST00000230222	retained_intron		15	1	102322688	296
ENSMUSG00000092455	processed_transcript	Gm20456	ENSMUST00000174690	processed_transcript		11	1	22839299	385
ENSMUSG00000062203	protein_coding	Gspt1	ENSMUST00000166063	retained_intron		16	-1	11237820	629
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000118875	protein_coding	principal1	6	-1	125165773	1420
ENSMUSG00000020719	protein_coding	Ddx5	ENSMUST00000123339	protein_coding		11	-1	106788883	831
ENSMUSG00000062203	protein_coding	Gspt1	ENSMUST00000229660	retained_intron		16	-1	11254325	1759
ENSMUSG00000019843	protein_coding	Fyn	ENSMUST00000063091	protein_coding	principal3	10	1	39369764	3562
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000183272	protein_coding		6	-1	125165576	884
ENSMUSG00000115955	TEC	9530056E24Rik	ENSMUST00000229108	TEC		2	1	130523995	3290
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000182464	retained_intron		6	-1	125163339	471
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000144205	processed_transcript		6	-1	125164916	560
ENSMUSG00000014329	protein_coding	Bicc1	ENSMUST00000143791	protein_coding	principal1	10	-1	71159700	5431
ENSMUSG00000069208	protein_coding	Zfp825	ENSMUST00000202645	protein_coding	principal2	13	-1	74493970	1406
ENSMUSG00000069208	protein_coding	Zfp825	ENSMUST00000221173	protein_coding	alternative2	13	-1	74493992	1549
ENSMUSG00000095716	protein_coding	Btbd35f10	ENSMUST00000178621	protein_coding	principal1	X	-1	3752885	1952
ENSMUSG00000040731	protein_coding	Eif4h	ENSMUST00000202622	protein_coding		5	-1	134639490	2726
ENSMUSG00000069208	protein_coding	Zfp825	ENSMUST00000074369	protein_coding		13	-1	74482943	822
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000182115	processed_transcript		6	-1	125165590	483
ENSMUSG00000095259	processed_pseudogene	Gm14357	ENSMUST00000178352	processed_pseudogene		X	-1	3756642	868
ENSMUSG00000019843	protein_coding	Fyn	ENSMUST00000099967	protein_coding	alternative1	10	1	39369798	3528
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000182052	protein_coding		6	-1	125165603	471
ENSMUSG00000082025	processed_pseudogene	Gm14359	ENSMUST00000118883	processed_pseudogene		X	1	3779668	424
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000182277	protein_coding		6	-1	125165603	482
ENSMUSG00000096524	processed_pseudogene	Gm14355	ENSMUST00000117352	processed_pseudogene		X	-1	3787090	264
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000182670	processed_transcript		6	-1	125165603	358
ENSMUSG00000051355	protein_coding	Commd1	ENSMUST00000159081	protein_coding	principal1	11	-1	22982382	4508
ENSMUSG00000102664	TEC	Gm38380	ENSMUST00000195718	TEC		1	-1	13356730	2248
ENSMUSG00000040731	protein_coding	Eif4h	ENSMUST00000036125	protein_coding	principal1	5	-1	134639347	2367
ENSMUSG00000014329	protein_coding	Bicc1	ENSMUST00000131445	protein_coding		10	-1	71146860	3005
ENSMUSG00000103506	TEC	Gm38376	ENSMUST00000195493	TEC		1	-1	13179714	2253
ENSMUSG00000051355	protein_coding	Commd1	ENSMUST00000071068	protein_coding		11	-1	22982252	473
ENSMUSG00000014329	protein_coding	Bicc1	ENSMUST00000014473	protein_coding		10	-1	71159690	3231
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000144588	retained_intron		6	-1	125165605	769
ENSMUSG00000019843	protein_coding	Fyn	ENSMUST00000126486	protein_coding	principal3	10	1	39369803	2495
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000231362	nonsense_mediated_decay		16	-1	20610758	1275
ENSMUSG00000104170	TEC	Gm37702	ENSMUST00000194357	TEC		1	-1	13298907	1872
ENSMUSG00000057666	protein_coding	Gapdh	ENSMUST00000073605	protein_coding	principal1	6	-1	125166467	1272
ENSMUSG00000051355	protein_coding	Commd1	ENSMUST00000057843	protein_coding		11	-1	22978996	1459
ENSMUSG00000051355	protein_coding	Commd1	ENSMUST00000161944	retained_intron		11	-1	22956947	760
ENSMUSG00000102639	TEC	Gm38223	ENSMUST00000194484	TEC		1	-1	13290506	695
ENSMUSG00000051355	protein_coding	Commd1	ENSMUST00000162924	processed_transcript		11	-1	22972859	526
ENSMUSG00000014329	protein_coding	Bicc1	ENSMUST00000144740	retained_intron		10	-1	70948489	3053
ENSMUSG00000051355	protein_coding	Commd1	ENSMUST00000093270	protein_coding		11	-1	22982184	469
ENSMUSG00000019843	protein_coding	Fyn	ENSMUST00000157009	protein_coding		10	1	39420009	441
ENSMUSG00000090212	antisense	Gm15647	ENSMUST00000160178	antisense		10	1	71082876	691
ENSMUSG00000031399	protein_coding	Fam3a	ENSMUST00000114143	protein_coding	principal1	X	-1	74393272	1899
ENSMUSG00000037971	protein_coding	1110032A03Rik	ENSMUST00000042468	protein_coding	principal3	9	-1	50768452	2082
ENSMUSG00000019843	protein_coding	Fyn	ENSMUST00000135242	protein_coding	principal3	10	1	39454805	2114
ENSMUSG00000047692	antisense	4930533K18Rik	ENSMUST00000219192	antisense		10	1	70868644	1307
ENSMUSG00000031399	protein_coding	Fam3a	ENSMUST00000015427	protein_coding	principal1	X	-1	74393003	1427
ENSMUSG00000037740	protein_coding	Mrps26	ENSMUST00000145614	protein_coding	principal1	2	1	130563742	4278
ENSMUSG00000019843	protein_coding	Fyn	ENSMUST00000146287	protein_coding	principal3	10	1	39454915	2135
ENSMUSG00000031399	protein_coding	Fam3a	ENSMUST00000114142	protein_coding	principal1	X	-1	74393103	1586
ENSMUSG00000051650	protein_coding	B3gnt2	ENSMUST00000189990	processed_transcript		11	-1	22859545	882
ENSMUSG00000037971	protein_coding	1110032A03Rik	ENSMUST00000177546	protein_coding		9	-1	50768121	647
ENSMUSG00000019843	protein_coding	Fyn	ENSMUST00000136659	protein_coding		10	1	39511739	1910
ENSMUSG00000031399	protein_coding	Fam3a	ENSMUST00000114141	protein_coding		X	-1	74393182	1243
ENSMUSG00000031399	protein_coding	Fam3a	ENSMUST00000114139	protein_coding		X	-1	74393103	931
ENSMUSG00000019843	protein_coding	Fyn	ENSMUST00000123205	processed_transcript		10	1	39533270	333
ENSMUSG00000040731	protein_coding	Eif4h	ENSMUST00000202289	retained_intron		5	-1	134639325	1057
ENSMUSG00000047692	antisense	4930533K18Rik	ENSMUST00000218757	antisense		10	1	70868669	1264
ENSMUSG00000031399	protein_coding	Fam3a	ENSMUST00000122894	protein_coding		X	-1	74393255	814
ENSMUSG00000047692	antisense	4930533K18Rik	ENSMUST00000058942	antisense		10	1	70868669	1259
ENSMUSG00000037971	protein_coding	1110032A03Rik	ENSMUST00000042576	protein_coding	alternative2	9	-1	50766102	1015
ENSMUSG00000051650	protein_coding	B3gnt2	ENSMUST00000062844	protein_coding	principal1	11	-1	22860101	3057
ENSMUSG00000031950	protein_coding	Gabarapl2	ENSMUST00000034428	protein_coding	principal1	8	1	111940703	1677
ENSMUSG00000040731	protein_coding	Eif4h	ENSMUST00000200874	retained_intron		5	-1	134639302	896
ENSMUSG00000112566	processed_pseudogene	Gm32025	ENSMUST00000217960	processed_pseudogene		10	1	71148160	307
ENSMUSG00000087014	antisense	Gm16364	ENSMUST00000153722	antisense		10	-1	39558062	1313
ENSMUSG00000037740	protein_coding	Mrps26	ENSMUST00000046149	retained_intron		2	1	130563742	1057
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000110647	protein_coding	alternative2	2	-1	121271341	9405
ENSMUSG00000031399	protein_coding	Fam3a	ENSMUST00000149218	nonsense_mediated_decay		X	-1	74393103	941
ENSMUSG00000112032	lincRNA	Gm48036	ENSMUST00000217867	lincRNA		10	-1	70872420	318
ENSMUSG00000040731	protein_coding	Eif4h	ENSMUST00000201263	retained_intron		5	-1	134639310	1849
ENSMUSG00000112745	sense_intronic	Gm48025	ENSMUST00000219321	sense_intronic		10	-1	70993040	1823
ENSMUSG00000111358	TEC	2900078I11Rik	ENSMUST00000214556	TEC		10	-1	39658426	999
ENSMUSG00000031399	protein_coding	Fam3a	ENSMUST00000136716	retained_intron		X	-1	74387755	769
ENSMUSG00000031950	protein_coding	Gabarapl2	ENSMUST00000130808	retained_intron		8	1	111940758	707
ENSMUSG00000031399	protein_coding	Fam3a	ENSMUST00000114138	protein_coding		X	-1	74392687	507
ENSMUSG00000037971	protein_coding	1110032A03Rik	ENSMUST00000176894	retained_intron		9	-1	50775520	2761
ENSMUSG00000031950	protein_coding	Gabarapl2	ENSMUST00000133628	retained_intron		8	1	111941068	749
ENSMUSG00000051650	protein_coding	B3gnt2	ENSMUST00000055549	protein_coding	principal1	11	-1	22860488	2602
ENSMUSG00000037971	protein_coding	1110032A03Rik	ENSMUST00000176682	retained_intron		9	-1	50764562	626
ENSMUSG00000031399	protein_coding	Fam3a	ENSMUST00000141604	nonsense_mediated_decay		X	-1	74392750	446
ENSMUSG00000037971	protein_coding	1110032A03Rik	ENSMUST00000176238	protein_coding		9	-1	50768160	692
ENSMUSG00000051650	protein_coding	B3gnt2	ENSMUST00000173660	protein_coding		11	-1	22860961	635
ENSMUSG00000014426	protein_coding	Map3k4	ENSMUST00000233755	protein_coding	alternative2	17	-1	12318748	5237
ENSMUSG00000029447	protein_coding	Cct6a	ENSMUST00000201414	processed_transcript		5	1	129786998	2454
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000110648	protein_coding	principal3	2	-1	121271407	9621
ENSMUSG00000063108	protein_coding	Zfp26	ENSMUST00000159569	protein_coding	principal1	9	-1	20460160	11276
ENSMUSG00000037971	protein_coding	1110032A03Rik	ENSMUST00000177142	processed_transcript		9	-1	50768098	627
ENSMUSG00000084081	processed_pseudogene	Gm12057	ENSMUST00000117244	processed_pseudogene		11	-1	22760025	1427
ENSMUSG00000029447	protein_coding	Cct6a	ENSMUST00000202854	retained_intron		5	1	129789681	800
ENSMUSG00000037971	protein_coding	1110032A03Rik	ENSMUST00000177022	processed_transcript		9	-1	50768169	564
ENSMUSG00000029447	protein_coding	Cct6a	ENSMUST00000201653	retained_intron		5	1	129789878	460
ENSMUSG00000018974	protein_coding	Sart3	ENSMUST00000019118	protein_coding	principal1	5	-1	113772510	4447
ENSMUSG00000037971	protein_coding	1110032A03Rik	ENSMUST00000176160	processed_transcript		9	-1	50770948	491
ENSMUSG00000029447	protein_coding	Cct6a	ENSMUST00000202262	retained_intron		5	1	129793181	701
ENSMUSG00000029447	protein_coding	Cct6a	ENSMUST00000202466	processed_transcript		5	1	129794575	424
ENSMUSG00000024137	protein_coding	E4f1	ENSMUST00000056032	protein_coding	principal2	17	-1	24455311	2574
ENSMUSG00000029447	protein_coding	Cct6a	ENSMUST00000201927	processed_transcript		5	1	129844970	411
ENSMUSG00000014426	protein_coding	Map3k4	ENSMUST00000089058	protein_coding	principal2	17	-1	12318796	5441
ENSMUSG00000058624	protein_coding	Gda	ENSMUST00000087600	protein_coding	principal1	19	-1	21472672	5428
ENSMUSG00000085007	protein_coding	Gm11549	ENSMUST00000124606	protein_coding	principal1	3	-1	36521813	2829
ENSMUSG00000085007	protein_coding	Gm11549	ENSMUST00000238836	processed_transcript		3	-1	36532384	1769
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000147540	nonsense_mediated_decay		2	-1	121236006	3983
ENSMUSG00000014426	protein_coding	Map3k4	ENSMUST00000233716	retained_intron		17	-1	12230216	755
ENSMUSG00000058624	protein_coding	Gda	ENSMUST00000237823	protein_coding		19	-1	21440859	3475
ENSMUSG00000085007	protein_coding	Gm11549	ENSMUST00000199064	TEC		3	-1	36532331	3110
ENSMUSG00000018974	protein_coding	Sart3	ENSMUST00000197041	nonsense_mediated_decay		5	-1	113771638	3261
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000147554	processed_transcript		2	-1	121204981	751
ENSMUSG00000029447	protein_coding	Cct6a	ENSMUST00000031402	protein_coding	principal1	5	1	129787439	1599
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000154426	nonsense_mediated_decay		2	-1	121207762	598
ENSMUSG00000018974	protein_coding	Sart3	ENSMUST00000198246	retained_intron		5	-1	113745595	606
ENSMUSG00000058624	protein_coding	Gda	ENSMUST00000121725	protein_coding		19	-1	21473445	2450
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000118599	protein_coding	principal3	17	1	27556497	1045
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000132812	processed_transcript		2	-1	121208574	682
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000124554	nonsense_mediated_decay		2	-1	121221241	594
ENSMUSG00000063108	protein_coding	Zfp26	ENSMUST00000098970	retained_intron		9	-1	20459957	5057
ENSMUSG00000018974	protein_coding	Sart3	ENSMUST00000196738	processed_transcript		5	-1	113755442	744
ENSMUSG00000058624	protein_coding	Gda	ENSMUST00000136258	retained_intron		19	-1	21472588	1353
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000124411	retained_intron		2	-1	121221232	1241
ENSMUSG00000018974	protein_coding	Sart3	ENSMUST00000198556	processed_transcript		5	-1	113754757	524
ENSMUSG00000063108	protein_coding	Zfp26	ENSMUST00000075263	retained_intron		9	-1	20459989	2932
ENSMUSG00000014426	protein_coding	Map3k4	ENSMUST00000232931	retained_intron		17	-1	12318796	3576
ENSMUSG00000024137	protein_coding	E4f1	ENSMUST00000226654	nonsense_mediated_decay		17	-1	24470313	2674
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000140582	processed_transcript		2	-1	121218436	671
ENSMUSG00000063108	protein_coding	Zfp26	ENSMUST00000160370	processed_transcript		9	-1	20441374	352
ENSMUSG00000018974	protein_coding	Sart3	ENSMUST00000198097	retained_intron		5	-1	113758214	622
ENSMUSG00000014426	protein_coding	Map3k4	ENSMUST00000233252	processed_transcript		17	-1	12265986	473
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000156493	retained_intron		2	-1	121221379	505
ENSMUSG00000063108	protein_coding	Zfp26	ENSMUST00000161248	retained_intron		9	-1	20460162	3368
ENSMUSG00000024137	protein_coding	E4f1	ENSMUST00000228882	protein_coding		17	-1	24451479	2226
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000232265	protein_coding	principal3	17	1	27556574	1681
ENSMUSG00000063108	protein_coding	Zfp26	ENSMUST00000162438	protein_coding		9	-1	20459827	576
ENSMUSG00000014426	protein_coding	Map3k4	ENSMUST00000232689	processed_transcript		17	-1	12318786	389
ENSMUSG00000018974	protein_coding	Sart3	ENSMUST00000196778	processed_transcript		5	-1	113761254	510
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000131245	protein_coding		2	-1	121271321	3098
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000220942	protein_coding		12	1	112720455	394
ENSMUSG00000024137	protein_coding	E4f1	ENSMUST00000226754	nonsense_mediated_decay		17	-1	24455315	2552
ENSMUSG00000105031	processed_pseudogene	Gm3511	ENSMUST00000199823	processed_pseudogene		5	1	113767123	204
ENSMUSG00000111626	processed_pseudogene	Gm48738	ENSMUST00000215252	processed_pseudogene		9	-1	20457171	389
ENSMUSG00000014426	protein_coding	Map3k4	ENSMUST00000233002	protein_coding		17	-1	12318391	470
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000142400	protein_coding		2	-1	121235689	456
ENSMUSG00000024137	protein_coding	E4f1	ENSMUST00000226941	protein_coding	alternative2	17	-1	24455392	2642
ENSMUSG00000014426	protein_coding	Map3k4	ENSMUST00000233012	protein_coding		17	-1	12308584	406
ENSMUSG00000101332	lincRNA	Gm28240	ENSMUST00000187560	lincRNA		1	1	56531824	2053
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000176769	protein_coding		19	1	26605050	5703
ENSMUSG00000014426	protein_coding	Map3k4	ENSMUST00000233683	retained_intron		17	-1	12318796	3813
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000232013	protein_coding	principal3	17	1	27556582	805
ENSMUSG00000080300	processed_pseudogene	Spin2-ps1	ENSMUST00000116643	processed_pseudogene		X	-1	3837534	875
ENSMUSG00000024137	protein_coding	E4f1	ENSMUST00000227241	retained_intron		17	-1	24444534	556
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000124031	processed_transcript		2	-1	121235821	409
ENSMUSG00000024137	protein_coding	E4f1	ENSMUST00000226743	processed_transcript		17	-1	24470191	1377
ENSMUSG00000037845	protein_coding	Fdxacb1	ENSMUST00000042391	protein_coding	principal1	9	1	50768236	2658
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000129752	nonsense_mediated_decay		2	-1	121252027	769
ENSMUSG00000045336	protein_coding	Hsfy2	ENSMUST00000062085	protein_coding	principal1	1	-1	56637435	1392
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000045918	protein_coding	principal1	16	-1	20610768	1451
ENSMUSG00000019842	protein_coding	Traf3ip2	ENSMUST00000019987	protein_coding	principal1	10	1	39612934	2867
ENSMUSG00000115355	lincRNA	4930445E18Rik	ENSMUST00000226199	lincRNA		15	-1	25332659	1015
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208163	protein_coding		19	1	26605052	421
ENSMUSG00000029063	protein_coding	Nadk	ENSMUST00000030939	protein_coding	principal2	4	1	155562378	2946
ENSMUSG00000019842	protein_coding	Traf3ip2	ENSMUST00000129693	retained_intron		10	1	39641134	312
ENSMUSG00000037845	protein_coding	Fdxacb1	ENSMUST00000176619	retained_intron		9	1	50768238	2527
ENSMUSG00000115355	lincRNA	4930445E18Rik	ENSMUST00000228450	lincRNA		15	-1	25332648	868
ENSMUSG00000019842	protein_coding	Traf3ip2	ENSMUST00000131629	processed_transcript		10	1	39646123	294
ENSMUSG00000112477	lincRNA	Gm48657	ENSMUST00000219287	lincRNA		10	1	94620540	1029
ENSMUSG00000112473	processed_pseudogene	Gm48658	ENSMUST00000218051	processed_pseudogene		10	-1	94653052	257
ENSMUSG00000019842	protein_coding	Traf3ip2	ENSMUST00000156016	retained_intron		10	1	39646714	768
ENSMUSG00000037845	protein_coding	Fdxacb1	ENSMUST00000176145	nonsense_mediated_decay		9	1	50768251	864
ENSMUSG00000019842	protein_coding	Traf3ip2	ENSMUST00000155945	retained_intron		10	1	39650555	869
ENSMUSG00000037845	protein_coding	Fdxacb1	ENSMUST00000176335	protein_coding		9	1	50768445	1817
ENSMUSG00000111847	processed_pseudogene	Gm8899	ENSMUST00000214635	processed_pseudogene		10	1	39662089	1332
ENSMUSG00000037845	protein_coding	Fdxacb1	ENSMUST00000177384	protein_coding		9	1	50770062	518
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000136617	processed_transcript		2	-1	121271369	751
ENSMUSG00000027852	protein_coding	Nras	ENSMUST00000029445	protein_coding	principal1	3	1	103058285	4470
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000131426	retained_intron		2	-1	121270286	536
ENSMUSG00000031241	protein_coding	Tbx22	ENSMUST00000168174	protein_coding	principal4	X	1	107667964	5217
ENSMUSG00000032561	protein_coding	Acpp	ENSMUST00000062723	protein_coding	principal3	9	-1	104337728	4483
ENSMUSG00000029063	protein_coding	Nadk	ENSMUST00000105613	protein_coding	principal2	4	1	155563700	3152
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000140285	retained_intron		2	-1	121271361	3043
ENSMUSG00000035681	protein_coding	Kcnc2	ENSMUST00000219301	protein_coding	principal2	10	1	112271121	2944
ENSMUSG00000043909	protein_coding	Trp53bp1	ENSMUST00000124060	retained_intron		2	-1	121271370	643
ENSMUSG00000001289	protein_coding	Pfdn5	ENSMUST00000166658	protein_coding	principal1	15	1	102326116	1062
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000206458	processed_transcript		7	1	123123885	688
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000025862	protein_coding	principal2	19	1	26605052	5921
ENSMUSG00000027852	protein_coding	Nras	ENSMUST00000200457	nonsense_mediated_decay		3	1	103058348	663
ENSMUSG00000032561	protein_coding	Acpp	ENSMUST00000131084	retained_intron		9	-1	104301225	891
ENSMUSG00000029063	protein_coding	Nadk	ENSMUST00000147062	processed_transcript		4	1	155563826	523
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000129191	antisense		10	-1	39732007	2011
ENSMUSG00000035681	protein_coding	Kcnc2	ENSMUST00000092175	protein_coding	alternative2	10	1	112271121	5046
ENSMUSG00000027852	protein_coding	Nras	ENSMUST00000200069	protein_coding	principal1	3	1	103058367	831
ENSMUSG00000026896	protein_coding	Ifih1	ENSMUST00000028259	protein_coding	principal3	2	-1	62646211	5470
ENSMUSG00000035681	protein_coding	Kcnc2	ENSMUST00000218445	protein_coding		10	1	112315340	4033
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000000984	protein_coding	principal1	14	-1	54409460	2132
ENSMUSG00000091006	protein_coding	Vmn2r69	ENSMUST00000171213	protein_coding	principal1	7	-1	85415920	15347
ENSMUSG00000031241	protein_coding	Tbx22	ENSMUST00000118986	protein_coding	alternative2	X	1	107676512	3035
ENSMUSG00000029063	protein_coding	Nadk	ENSMUST00000143840	protein_coding		4	1	155563842	399
ENSMUSG00000001289	protein_coding	Pfdn5	ENSMUST00000062492	protein_coding		15	1	102326148	464
ENSMUSG00000035681	protein_coding	Kcnc2	ENSMUST00000219607	protein_coding		10	1	112456256	596
ENSMUSG00000091006	protein_coding	Vmn2r69	ENSMUST00000207880	nonsense_mediated_decay		7	-1	85415920	15500
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000205514	protein_coding		7	1	123124177	358
ENSMUSG00000091006	protein_coding	Vmn2r69	ENSMUST00000233336	protein_coding		7	-1	85415920	13051
ENSMUSG00000032561	protein_coding	Acpp	ENSMUST00000112590	protein_coding	alternative2	9	-1	104337707	2652
ENSMUSG00000091006	protein_coding	Vmn2r69	ENSMUST00000233859	nonsense_mediated_decay		7	-1	85415920	15979
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000226753	protein_coding	principal1	14	-1	54417679	2126
ENSMUSG00000029063	protein_coding	Nadk	ENSMUST00000146080	protein_coding		4	1	155563908	408
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000151921	antisense		10	-1	39732006	1660
ENSMUSG00000035681	protein_coding	Kcnc2	ENSMUST00000218827	protein_coding		10	1	112456343	4370
ENSMUSG00000092256	unprocessed_pseudogene	Gm18359	ENSMUST00000173024	unprocessed_pseudogene		7	1	85476955	1459
ENSMUSG00000029063	protein_coding	Nadk	ENSMUST00000135429	protein_coding		4	1	155564072	388
ENSMUSG00000027852	protein_coding	Nras	ENSMUST00000199367	protein_coding		3	1	103058594	276
ENSMUSG00000108857	processed_pseudogene	Gm44578	ENSMUST00000207236	processed_pseudogene		7	1	85501297	3835
ENSMUSG00000026896	protein_coding	Ifih1	ENSMUST00000112459	protein_coding	alternative2	2	-1	62646153	3616
ENSMUSG00000029063	protein_coding	Nadk	ENSMUST00000105612	protein_coding	alternative2	4	1	155582495	2737
ENSMUSG00000092431	unprocessed_pseudogene	Vmn2r-ps70	ENSMUST00000174636	unprocessed_pseudogene		7	-1	85512149	302
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000197440	protein_coding	principal1	14	-1	54417699	2278
ENSMUSG00000029446	protein_coding	Psph	ENSMUST00000118268	protein_coding		5	-1	129779173	785
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000210104	protein_coding		8	1	11727721	574
ENSMUSG00000031241	protein_coding	Tbx22	ENSMUST00000068451	protein_coding		X	1	107678963	2947
ENSMUSG00000001289	protein_coding	Pfdn5	ENSMUST00000168805	retained_intron		15	1	102326168	827
ENSMUSG00000092467	unprocessed_pseudogene	Gm18360	ENSMUST00000173327	unprocessed_pseudogene		7	1	85516723	1524
ENSMUSG00000027852	protein_coding	Nras	ENSMUST00000199049	protein_coding		3	1	103058596	802
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000195970	protein_coding	principal1	14	-1	54410216	2057
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000231531	protein_coding		16	-1	20611735	1280
ENSMUSG00000027852	protein_coding	Nras	ENSMUST00000197678	protein_coding		3	1	103058743	629
ENSMUSG00000031241	protein_coding	Tbx22	ENSMUST00000168403	protein_coding		X	1	107679015	1715
ENSMUSG00000001289	protein_coding	Pfdn5	ENSMUST00000170627	protein_coding		15	1	102326189	330
ENSMUSG00000029063	protein_coding	Nadk	ENSMUST00000152297	processed_transcript		4	1	155586777	671
ENSMUSG00000032561	protein_coding	Acpp	ENSMUST00000128635	retained_intron		9	-1	104337682	1199
ENSMUSG00000027852	protein_coding	Nras	ENSMUST00000196355	nonsense_mediated_decay		3	1	103058903	1920
ENSMUSG00000032561	protein_coding	Acpp	ENSMUST00000125800	retained_intron		9	-1	104337707	1507
ENSMUSG00000032561	protein_coding	Acpp	ENSMUST00000215852	protein_coding		9	-1	104337748	554
ENSMUSG00000027852	protein_coding	Nras	ENSMUST00000128264	nonsense_mediated_decay		3	1	103058903	1749
ENSMUSG00000001289	protein_coding	Pfdn5	ENSMUST00000001335	nonsense_mediated_decay		15	1	102326189	570
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000143651	antisense		10	-1	39731816	381
ENSMUSG00000001289	protein_coding	Pfdn5	ENSMUST00000169637	protein_coding		15	1	102326383	334
ENSMUSG00000027852	protein_coding	Nras	ENSMUST00000199776	retained_intron		3	1	103058988	832
ENSMUSG00000001289	protein_coding	Pfdn5	ENSMUST00000165671	protein_coding		15	1	102326391	830
ENSMUSG00000050619	protein_coding	Zscan29	ENSMUST00000110661	protein_coding	principal2	2	-1	121170268	5072
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000196966	processed_transcript		14	-1	54384167	638
ENSMUSG00000026896	protein_coding	Ifih1	ENSMUST00000176431	retained_intron		2	-1	62646255	2904
ENSMUSG00000024256	protein_coding	Adcyap1	ENSMUST00000234646	protein_coding		17	1	93199017	327
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000197667	processed_transcript		14	-1	54397954	492
ENSMUSG00000001289	protein_coding	Pfdn5	ENSMUST00000165717	protein_coding		15	1	102326410	374
ENSMUSG00000024597	protein_coding	Slc12a2	ENSMUST00000115366	protein_coding	principal1	18	1	57878678	6520
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000139356	antisense		10	-1	39731849	701
ENSMUSG00000050619	protein_coding	Zscan29	ENSMUST00000079024	protein_coding		2	-1	121170268	2465
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000228488	protein_coding		14	-1	54410202	723
ENSMUSG00000026896	protein_coding	Ifih1	ENSMUST00000176388	processed_transcript		2	-1	62639473	439
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000133302	antisense		10	-1	39732001	438
ENSMUSG00000050619	protein_coding	Zscan29	ENSMUST00000156370	retained_intron		2	-1	121164434	756
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000200545	protein_coding		14	-1	54410600	664
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000139429	antisense		10	-1	39731814	503
ENSMUSG00000095377	protein_coding	Olfr91	ENSMUST00000217372	protein_coding	principal1	17	-1	37098278	3809
ENSMUSG00000026896	protein_coding	Ifih1	ENSMUST00000175964	retained_intron		2	-1	62646158	2565
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000227967	protein_coding		14	-1	54410621	572
ENSMUSG00000024597	protein_coding	Slc12a2	ENSMUST00000236673	retained_intron		18	1	57927205	4480
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000153261	antisense		10	-1	39731776	287
ENSMUSG00000095377	protein_coding	Olfr91	ENSMUST00000216376	protein_coding	principal1	17	-1	37098255	3832
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000139891	antisense		10	-1	39645655	628
ENSMUSG00000068480	processed_pseudogene	Gm7551	ENSMUST00000089593	processed_pseudogene		7	1	65784859	1074
ENSMUSG00000095377	protein_coding	Olfr91	ENSMUST00000087144	protein_coding	principal1	17	-1	37093872	939
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000145971	antisense		10	-1	39731982	830
ENSMUSG00000003848	protein_coding	Nob1	ENSMUST00000170796	retained_intron		8	-1	107421562	2137
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000136862	antisense		10	-1	39728181	608
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000149830	antisense		10	-1	39732006	660
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000227334	protein_coding		14	-1	54414014	711
ENSMUSG00000050619	protein_coding	Zscan29	ENSMUST00000146243	protein_coding		2	-1	121171125	2894
ENSMUSG00000110991	polymorphic_pseudogene	Olfr908	ENSMUST00000215139	polymorphic_pseudogene	principal1	9	1	38516034	932
ENSMUSG00000050619	protein_coding	Zscan29	ENSMUST00000163766	protein_coding	alternative2	2	-1	121171125	3611
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000155482	antisense		10	-1	39732006	2803
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000196215	protein_coding		14	-1	54412193	461
ENSMUSG00000100094	lincRNA	1810008I18Rik	ENSMUST00000187848	lincRNA		7	1	65803111	819
ENSMUSG00000087177	antisense	E130307A14Rik	ENSMUST00000153113	antisense		10	-1	39731967	1756
ENSMUSG00000000958	protein_coding	Slc7a7	ENSMUST00000195999	protein_coding		14	-1	54417780	622
ENSMUSG00000057093	protein_coding	Zfp607b	ENSMUST00000120004	protein_coding	principal1	7	1	27689340	4612
ENSMUSG00000096477	protein_coding	Olfr92	ENSMUST00000214994	protein_coding	principal1	17	-1	37120062	2073
ENSMUSG00000100094	lincRNA	1810008I18Rik	ENSMUST00000185464	lincRNA		7	1	65804031	2419
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000127454	nonsense_mediated_decay		16	-1	20610731	1132
ENSMUSG00000057093	protein_coding	Zfp607b	ENSMUST00000127200	retained_intron		7	1	27691913	833
ENSMUSG00000083366	processed_pseudogene	Gm14887	ENSMUST00000119522	processed_pseudogene		X	-1	59867753	663
ENSMUSG00000039193	protein_coding	Nlrc4	ENSMUST00000052124	protein_coding	principal1	17	-1	74459142	4729
ENSMUSG00000057093	protein_coding	Zfp607b	ENSMUST00000124397	retained_intron		7	1	27692477	527
ENSMUSG00000096477	protein_coding	Olfr92	ENSMUST00000216341	protein_coding	principal1	17	-1	37120088	2115
ENSMUSG00000057093	protein_coding	Zfp607b	ENSMUST00000076421	protein_coding	principal1	7	1	27692502	1947
ENSMUSG00000086915	antisense	Gm16364	ENSMUST00000122987	antisense		10	-1	39588452	629
ENSMUSG00000096477	protein_coding	Olfr92	ENSMUST00000168659	protein_coding	principal1	17	-1	37111980	939
ENSMUSG00000086915	antisense	Gm16364	ENSMUST00000142723	antisense		10	-1	39613667	394
ENSMUSG00000086915	antisense	Gm16364	ENSMUST00000124241	antisense		10	-1	39613671	369
ENSMUSG00000092339	processed_pseudogene	Gm4831	ENSMUST00000174626	processed_pseudogene		17	1	37113855	594
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000114888	protein_coding	alternative1	17	1	27556585	1631
ENSMUSG00000086915	antisense	Gm16364	ENSMUST00000143877	antisense		10	-1	39613682	779
ENSMUSG00000062621	protein_coding	Olfr911-ps1	ENSMUST00000216496	protein_coding	principal1	9	1	38521580	3576
ENSMUSG00000039193	protein_coding	Nlrc4	ENSMUST00000233637	nonsense_mediated_decay		17	-1	74453077	3110
ENSMUSG00000029446	protein_coding	Psph	ENSMUST00000031399	protein_coding	principal1	5	-1	129787449	1733
ENSMUSG00000097054	unprocessed_pseudogene	Gm11395	ENSMUST00000181011	unprocessed_pseudogene		13	1	33741240	499
ENSMUSG00000039193	protein_coding	Nlrc4	ENSMUST00000234086	protein_coding		17	-1	74448206	3154
ENSMUSG00000062621	protein_coding	Olfr911-ps1	ENSMUST00000074987	protein_coding	principal1	9	1	38523730	940
ENSMUSG00000117187	processed_pseudogene	Gm4708	ENSMUST00000233026	processed_pseudogene		17	-1	74438639	355
ENSMUSG00000003848	protein_coding	Nob1	ENSMUST00000169311	nonsense_mediated_decay		8	-1	107425041	1255
ENSMUSG00000024256	protein_coding	Adcyap1	ENSMUST00000234081	protein_coding	principal1	17	1	93199021	3117
ENSMUSG00000029446	protein_coding	Psph	ENSMUST00000136280	processed_transcript		5	-1	129771155	446
ENSMUSG00000029446	protein_coding	Psph	ENSMUST00000201394	protein_coding		5	-1	129779213	510
ENSMUSG00000090374	antisense	Gm17232	ENSMUST00000164515	antisense		14	1	63493699	453
ENSMUSG00000029446	protein_coding	Psph	ENSMUST00000136507	protein_coding		5	-1	129787154	820
ENSMUSG00000033268	protein_coding	Duox1	ENSMUST00000099461	protein_coding	principal1	2	1	122315672	5267
ENSMUSG00000029446	protein_coding	Psph	ENSMUST00000201022	retained_intron		5	-1	129779206	398
ENSMUSG00000024256	protein_coding	Adcyap1	ENSMUST00000064775	protein_coding	principal1	17	1	93199168	3392
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000176030	protein_coding	alternative2	19	1	26605119	5862
ENSMUSG00000043531	protein_coding	Sorcs1	ENSMUST00000209413	protein_coding		19	-1	50678646	4398
ENSMUSG00000029446	protein_coding	Psph	ENSMUST00000178244	retained_intron		5	-1	129787252	2877
ENSMUSG00000024256	protein_coding	Adcyap1	ENSMUST00000234663	protein_coding		17	1	93199935	318
ENSMUSG00000022912	protein_coding	Pros1	ENSMUST00000023629	protein_coding	principal1	16	1	62854307	3303
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000231874	protein_coding	principal3	17	1	27556604	2001
ENSMUSG00000029446	protein_coding	Psph	ENSMUST00000202374	processed_transcript		5	-1	129787207	383
ENSMUSG00000027618	protein_coding	Nfs1	ENSMUST00000029147	protein_coding	principal1	2	-1	156144186	2051
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000123774	nonsense_mediated_decay		16	-1	20610747	1308
ENSMUSG00000024256	protein_coding	Adcyap1	ENSMUST00000234204	retained_intron		17	1	93202076	2011
ENSMUSG00000101381	protein_coding	Btbd35f16	ENSMUST00000185755	protein_coding	principal1	X	-1	3957002	1949
ENSMUSG00000031138	protein_coding	F9	ENSMUST00000033477	protein_coding	principal1	X	1	59999464	2734
ENSMUSG00000022912	protein_coding	Pros1	ENSMUST00000155940	retained_intron		16	1	62898149	863
ENSMUSG00000085051	processed_transcript	Gm11542	ENSMUST00000126480	processed_transcript		11	1	94677565	1511
ENSMUSG00000117362	processed_pseudogene	Gm9665	ENSMUST00000234454	processed_pseudogene		17	-1	93317261	542
ENSMUSG00000003848	protein_coding	Nob1	ENSMUST00000003946	protein_coding	principal1	8	-1	107425049	1658
ENSMUSG00000117452	processed_pseudogene	Gm6764	ENSMUST00000234060	processed_pseudogene		17	1	93331463	1475
ENSMUSG00000022912	protein_coding	Pros1	ENSMUST00000127502	processed_transcript		16	1	62921467	791
ENSMUSG00000043531	protein_coding	Sorcs1	ENSMUST00000211687	protein_coding	principal2	19	-1	50678485	7080
ENSMUSG00000027618	protein_coding	Nfs1	ENSMUST00000184469	protein_coding		2	-1	156139809	510
ENSMUSG00000017412	protein_coding	Cacnb4	ENSMUST00000102760	protein_coding	alternative1	2	-1	52558560	7872
ENSMUSG00000117368	processed_pseudogene	Gm50001	ENSMUST00000234726	processed_pseudogene		17	-1	93391698	352
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000119486	protein_coding	principal3	17	1	27556614	1030
ENSMUSG00000056008	protein_coding	Gm11541	ENSMUST00000069852	protein_coding	principal1	11	-1	94704499	1681
ENSMUSG00000117514	processed_pseudogene	Gm50002	ENSMUST00000234106	processed_pseudogene		17	-1	93680665	332
ENSMUSG00000017412	protein_coding	Cacnb4	ENSMUST00000102761	protein_coding	alternative1	2	-1	52558567	8039
ENSMUSG00000027618	protein_coding	Nfs1	ENSMUST00000125449	retained_intron		2	-1	156144153	1649
ENSMUSG00000117537	processed_pseudogene	Gm50003	ENSMUST00000234228	processed_pseudogene		17	-1	93681034	283
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000099537	nonsense_mediated_decay		19	1	26607270	5913
ENSMUSG00000117543	processed_pseudogene	Gm50004	ENSMUST00000235005	processed_pseudogene		17	-1	94132271	394
ENSMUSG00000027618	protein_coding	Nfs1	ENSMUST00000109600	protein_coding		2	-1	156144180	709
ENSMUSG00000003848	protein_coding	Nob1	ENSMUST00000163757	retained_intron		8	-1	107424986	863
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000231825	protein_coding	alternative1	17	1	27556615	1717
ENSMUSG00000117476	processed_pseudogene	Gm9416	ENSMUST00000234959	processed_pseudogene		17	1	94608185	313
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000176584	protein_coding		19	1	26623455	645
ENSMUSG00000117382	processed_pseudogene	Gm50005	ENSMUST00000234855	processed_pseudogene		17	1	94660397	459
ENSMUSG00000020870	protein_coding	Cdc34b	ENSMUST00000021240	protein_coding	principal1	11	1	94741782	1233
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000231866	protein_coding		17	1	27556632	584
ENSMUSG00000048385	protein_coding	Scrt1	ENSMUST00000096365	protein_coding	principal1	15	-1	76522499	4380
ENSMUSG00000117586	processed_pseudogene	Gm50006	ENSMUST00000234452	processed_pseudogene		17	1	94692889	453
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000176019	retained_intron		19	1	26671098	661
ENSMUSG00000003848	protein_coding	Nob1	ENSMUST00000163973	retained_intron		8	-1	107425051	1427
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208303	protein_coding		19	1	26671139	683
ENSMUSG00000020870	protein_coding	Cdc34b	ENSMUST00000188741	protein_coding		11	1	94741782	1252
ENSMUSG00000003848	protein_coding	Nob1	ENSMUST00000076585	processed_transcript		8	-1	107422327	783
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000231780	protein_coding		17	1	27556639	619
ENSMUSG00000017412	protein_coding	Cacnb4	ENSMUST00000078324	protein_coding	principal4	2	-1	52676831	8225
ENSMUSG00000003848	protein_coding	Nob1	ENSMUST00000109273	retained_intron		8	-1	107418666	426
ENSMUSG00000048385	protein_coding	Scrt1	ENSMUST00000164703	protein_coding	principal1	15	-1	76521902	3478
ENSMUSG00000017412	protein_coding	Cacnb4	ENSMUST00000132322	processed_transcript		2	-1	52556709	290
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000094053	protein_coding	principal1	7	1	123124181	8183
ENSMUSG00000003848	protein_coding	Nob1	ENSMUST00000165266	nonsense_mediated_decay		8	-1	107425026	476
ENSMUSG00000017412	protein_coding	Cacnb4	ENSMUST00000148837	processed_transcript		2	-1	52676143	208
ENSMUSG00000017412	protein_coding	Cacnb4	ENSMUST00000178799	protein_coding	alternative1	2	-1	52676582	7981
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000232253	protein_coding	alternative1	17	1	27556641	600
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000206888	nonsense_mediated_decay		7	1	123124256	3625
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000205789	retained_intron		7	1	123169122	1783
ENSMUSG00000022096	protein_coding	Hr	ENSMUST00000159959	processed_transcript		14	1	70552212	321
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000232552	protein_coding	alternative1	17	1	27556641	917
ENSMUSG00000001285	protein_coding	Myg1	ENSMUST00000113682	protein_coding	principal1	15	1	102331709	1480
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000205760	protein_coding		7	1	123170631	5223
ENSMUSG00000022096	protein_coding	Hr	ENSMUST00000161468	processed_transcript		14	1	70552245	337
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000175935	processed_transcript		19	1	26681010	1584
ENSMUSG00000091205	protein_coding	Vmn2r71	ENSMUST00000208545	processed_transcript		7	1	85563087	1088
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000205449	retained_intron		7	1	123171387	4312
ENSMUSG00000091205	protein_coding	Vmn2r71	ENSMUST00000208273	processed_transcript		7	1	85574614	1552
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000207175	retained_intron		19	1	26696636	2838
ENSMUSG00000030512	protein_coding	Snrpa1	ENSMUST00000206150	processed_transcript		7	1	66059003	654
ENSMUSG00000030512	protein_coding	Snrpa1	ENSMUST00000123157	processed_transcript		7	1	66060299	664
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208378	retained_intron		19	1	26697983	1133
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000206922	retained_intron		7	1	123171646	939
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000117600	protein_coding	alternative1	17	1	27556653	1595
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208674	protein_coding		19	1	26706171	800
ENSMUSG00000043531	protein_coding	Sorcs1	ENSMUST00000168357	nonsense_mediated_decay		19	-1	50252678	2645
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000205732	retained_intron		7	1	123172858	606
ENSMUSG00000001285	protein_coding	Myg1	ENSMUST00000170281	retained_intron		15	1	102331720	741
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000117254	protein_coding	alternative1	17	1	27556663	916
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000176731	nonsense_mediated_decay		19	1	26710548	2018
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000206014	protein_coding		7	1	123174215	463
ENSMUSG00000043531	protein_coding	Sorcs1	ENSMUST00000211008	protein_coding	alternative1	19	-1	50678485	3617
ENSMUSG00000040918	protein_coding	Slc19a2	ENSMUST00000044021	protein_coding	principal1	1	1	164249046	3571
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000231904	nonsense_mediated_decay		16	-1	20610761	1239
ENSMUSG00000043531	protein_coding	Sorcs1	ENSMUST00000209783	protein_coding		19	-1	50678485	3489
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000231243	protein_coding		17	1	27556668	524
ENSMUSG00000000215	protein_coding	Ins2	ENSMUST00000105931	protein_coding		7	-1	142679685	472
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000231471	nonsense_mediated_decay		16	-1	20610761	1215
ENSMUSG00000030507	protein_coding	Dbx1	ENSMUST00000032717	protein_coding	principal1	7	-1	49636849	2091
ENSMUSG00000091205	protein_coding	Vmn2r71	ENSMUST00000172338	protein_coding	principal1	7	1	85615397	2766
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000231358	protein_coding	alternative1	17	1	27556668	805
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000147867	nonsense_mediated_decay		16	-1	20610761	1078
ENSMUSG00000000215	protein_coding	Ins2	ENSMUST00000105934	protein_coding	principal1	7	-1	142699510	480
ENSMUSG00000040918	protein_coding	Slc19a2	ENSMUST00000159230	protein_coding		1	1	164249055	3432
ENSMUSG00000043531	protein_coding	Sorcs1	ENSMUST00000164039	protein_coding	alternative2	19	-1	50678646	7241
ENSMUSG00000040918	protein_coding	Slc19a2	ENSMUST00000169394	protein_coding		1	1	164249253	894
ENSMUSG00000113573	lincRNA	AU017674	ENSMUST00000222864	lincRNA		13	1	70149800	720
ENSMUSG00000040918	protein_coding	Slc19a2	ENSMUST00000160773	retained_intron		1	1	164262353	471
ENSMUSG00000001285	protein_coding	Myg1	ENSMUST00000170078	retained_intron		15	1	102331738	1319
ENSMUSG00000043531	protein_coding	Sorcs1	ENSMUST00000111756	protein_coding	alternative1	19	-1	50678485	3617
ENSMUSG00000047115	protein_coding	Fam221a	ENSMUST00000060561	protein_coding	principal3	6	1	49367739	2730
ENSMUSG00000001285	protein_coding	Myg1	ENSMUST00000001331	protein_coding		15	1	102331750	981
ENSMUSG00000043531	protein_coding	Sorcs1	ENSMUST00000072685	protein_coding		19	-1	50678646	4396
ENSMUSG00000001285	protein_coding	Myg1	ENSMUST00000171244	protein_coding		15	1	102331755	918
ENSMUSG00000074673	protein_coding	Ttll9	ENSMUST00000099197	protein_coding	principal1	2	1	152962485	1797
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000232458	protein_coding		16	-1	20611735	1319
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000232319	protein_coding		16	-1	20611735	997
ENSMUSG00000021953	protein_coding	Tdh	ENSMUST00000022522	protein_coding	principal1	14	-1	63509092	1881
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000231749	protein_coding		16	-1	20611735	754
ENSMUSG00000060114	protein_coding	Olfr910	ENSMUST00000215122	protein_coding	principal1	9	1	38537849	1996
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000118570	protein_coding	alternative1	17	1	27556668	1898
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000231387	nonsense_mediated_decay		16	-1	20611735	1158
ENSMUSG00000039745	protein_coding	Htatip2	ENSMUST00000208048	retained_intron		7	1	49759115	983
ENSMUSG00000110007	antisense	Gm45352	ENSMUST00000235909	antisense		19	1	50146938	2016
ENSMUSG00000033809	protein_coding	Alg3	ENSMUST00000232451	nonsense_mediated_decay		16	-1	20611735	1058
ENSMUSG00000090806	protein_coding	Vmn2r70	ENSMUST00000168230	protein_coding	principal2	7	-1	85569192	12965
ENSMUSG00000110007	antisense	Gm45352	ENSMUST00000210140	antisense		19	1	50147014	1452
ENSMUSG00000046711	protein_coding	Hmga1	ENSMUST00000231796	protein_coding	alternative1	17	1	27556695	706
ENSMUSG00000047115	protein_coding	Fam221a	ENSMUST00000121903	protein_coding	alternative2	6	1	49367823	1304
ENSMUSG00000092223	processed_pseudogene	Gm19807	ENSMUST00000173971	processed_pseudogene		17	1	37130909	667
ENSMUSG00000000215	protein_coding	Ins2	ENSMUST00000210288	protein_coding	principal1	7	-1	142743381	918
ENSMUSG00000001285	protein_coding	Myg1	ENSMUST00000171733	retained_intron		15	1	102331917	694
ENSMUSG00000052707	protein_coding	Tnrc6a	ENSMUST00000206126	retained_intron		7	1	123179921	3297
ENSMUSG00000090806	protein_coding	Vmn2r70	ENSMUST00000233631	protein_coding	alternative2	7	-1	85569192	12866
ENSMUSG00000001285	protein_coding	Myg1	ENSMUST00000164019	processed_transcript		15	1	102332430	495
ENSMUSG00000109814	lincRNA	Gm45847	ENSMUST00000211504	lincRNA		7	1	123031415	662
ENSMUSG00000092533	unprocessed_pseudogene	Vmn2r-ps72	ENSMUST00000172586	unprocessed_pseudogene		7	-1	85590556	907
ENSMUSG00000021953	protein_coding	Tdh	ENSMUST00000168669	nonsense_mediated_decay		14	-1	63500259	1041
ENSMUSG00000047115	protein_coding	Fam221a	ENSMUST00000134786	protein_coding		6	1	49367896	357
ENSMUSG00000097446	antisense	Gm26629	ENSMUST00000180848	antisense		19	1	50677406	2276
ENSMUSG00000001285	protein_coding	Myg1	ENSMUST00000170713	retained_intron		15	1	102333640	792
ENSMUSG00000000215	protein_coding	Ins2	ENSMUST00000105930	protein_coding		7	-1	142679692	583
ENSMUSG00000117758	lincRNA	Gm50302	ENSMUST00000235421	lincRNA		19	-1	50713685	457
ENSMUSG00000001285	protein_coding	Myg1	ENSMUST00000164961	retained_intron		15	1	102336771	735
ENSMUSG00000047115	protein_coding	Fam221a	ENSMUST00000142950	processed_transcript		6	1	49378974	494
ENSMUSG00000021953	protein_coding	Tdh	ENSMUST00000165776	nonsense_mediated_decay		14	-1	63500259	902
ENSMUSG00000118152	processed_pseudogene	Gm2390	ENSMUST00000237194	processed_pseudogene		18	1	84712576	897
ENSMUSG00000021953	protein_coding	Tdh	ENSMUST00000168488	nonsense_mediated_decay		14	-1	63500259	836
ENSMUSG00000047115	protein_coding	Fam221a	ENSMUST00000141910	retained_intron		6	1	49385252	661
ENSMUSG00000001285	protein_coding	Myg1	ENSMUST00000168547	retained_intron		15	1	102337033	528
ENSMUSG00000047115	protein_coding	Fam221a	ENSMUST00000203182	retained_intron		6	1	49387479	1740
ENSMUSG00000109814	lincRNA	Gm45847	ENSMUST00000209402	lincRNA		7	1	123031494	1880
ENSMUSG00000111448	protein_coding	Olfr912	ENSMUST00000217160	protein_coding	principal1	9	1	38580178	5726
ENSMUSG00000110230	lincRNA	Gm45846	ENSMUST00000211170	lincRNA		7	1	123031374	446
ENSMUSG00000021953	protein_coding	Tdh	ENSMUST00000170772	retained_intron		14	-1	63497139	619
ENSMUSG00000106678	TEC	Gm43457	ENSMUST00000200867	TEC		5	1	34487314	2409
ENSMUSG00000051146	protein_coding	Camk2n2	ENSMUST00000052939	protein_coding	principal1	16	-1	20621287	1291
ENSMUSG00000079382	transcribed_unitary_pseudogene	Gm3443	ENSMUST00000236172	processed_transcript		19	1	21552204	1261
ENSMUSG00000021953	protein_coding	Tdh	ENSMUST00000167685	processed_transcript		14	-1	63508756	556
ENSMUSG00000087217	antisense	Gm13209	ENSMUST00000138492	antisense		4	-1	148586007	494
ENSMUSG00000116764	antisense	Gm49748	ENSMUST00000232229	antisense		16	-1	20590684	428
ENSMUSG00000081848	processed_pseudogene	Gm14925	ENSMUST00000120611	processed_pseudogene		X	1	96194051	438
ENSMUSG00000079382	transcribed_unitary_pseudogene	Gm3443	ENSMUST00000237590	processed_transcript		19	1	21552204	660
ENSMUSG00000091601	protein_coding	Olfr93	ENSMUST00000208003	nonsense_mediated_decay		17	-1	37151508	760
ENSMUSG00000079382	transcribed_unitary_pseudogene	Gm3443	ENSMUST00000237150	processed_transcript		19	1	21552204	688
ENSMUSG00000079382	transcribed_unitary_pseudogene	Gm3443	ENSMUST00000112772	transcribed_unitary_pseudogene		19	1	21552941	328
ENSMUSG00000091601	protein_coding	Olfr93	ENSMUST00000219235	protein_coding	principal1	17	-1	37161494	2929
ENSMUSG00000095889	IG_V_gene	Ighv1-58	ENSMUST00000103529	IG_V_gene	principal1	12	-1	115312599	351
ENSMUSG00000089760	bidirectional_promoter_lncRNA	D030046N08Rik	ENSMUST00000162318	bidirectional_promoter_lncRNA		18	-1	84720775	1570
ENSMUSG00000029428	protein_coding	Stx2	ENSMUST00000031378	protein_coding		5	-1	129008574	2939
ENSMUSG00000059864	protein_coding	Olfr1393	ENSMUST00000217626	processed_transcript		11	1	49278304	2837
ENSMUSG00000010045	protein_coding	Tmem115	ENSMUST00000010189	protein_coding	principal1	9	1	107533945	2194
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000043069	protein_coding	principal1	15	1	78597047	2791
ENSMUSG00000089824	protein_coding	Rbm12	ENSMUST00000059647	protein_coding	principal1	2	-1	156111956	6667
ENSMUSG00000024072	protein_coding	Yipf4	ENSMUST00000234939	processed_transcript		17	1	74489493	481
ENSMUSG00000091601	protein_coding	Olfr93	ENSMUST00000171679	protein_coding	principal1	17	-1	37152051	1045
ENSMUSG00000047992	protein_coding	Dipk1c	ENSMUST00000237920	retained_intron		18	1	84719236	3351
ENSMUSG00000022807	protein_coding	Osbpl11	ENSMUST00000232100	protein_coding	alternative2	16	1	33185071	4475
ENSMUSG00000059864	protein_coding	Olfr1393	ENSMUST00000213323	protein_coding	principal1	11	1	49278304	3010
ENSMUSG00000022807	protein_coding	Osbpl11	ENSMUST00000232181	protein_coding	principal2	16	1	33185071	4475
ENSMUSG00000029428	protein_coding	Stx2	ENSMUST00000100680	protein_coding	principal1	5	-1	129008535	2769
ENSMUSG00000092408	processed_pseudogene	Vhl-ps1	ENSMUST00000174813	processed_pseudogene		17	-1	37164969	597
ENSMUSG00000022807	protein_coding	Osbpl11	ENSMUST00000231617	retained_intron		16	1	33224598	1676
ENSMUSG00000022807	protein_coding	Osbpl11	ENSMUST00000039733	protein_coding	principal2	16	1	33185071	4521
ENSMUSG00000059864	protein_coding	Olfr1393	ENSMUST00000078932	protein_coding	principal1	11	1	49280150	936
ENSMUSG00000046020	protein_coding	Pofut1	ENSMUST00000049863	protein_coding	principal1	2	1	153241533	5600
ENSMUSG00000030512	protein_coding	Snrpa1	ENSMUST00000153609	protein_coding	principal1	7	1	66060338	1248
ENSMUSG00000104671	lincRNA	Gm43062	ENSMUST00000196302	lincRNA		3	1	103071174	1319
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000231180	protein_coding		15	1	78597053	813
ENSMUSG00000029428	protein_coding	Stx2	ENSMUST00000128448	retained_intron		5	-1	128989158	758
ENSMUSG00000089824	protein_coding	Rbm12	ENSMUST00000109604	protein_coding	principal1	2	-1	156111956	6635
ENSMUSG00000115593	processed_pseudogene	Gm4824	ENSMUST00000228649	processed_pseudogene		15	-1	25840611	492
ENSMUSG00000030512	protein_coding	Snrpa1	ENSMUST00000206166	processed_transcript		7	1	66060532	489
ENSMUSG00000029428	protein_coding	Stx2	ENSMUST00000144846	retained_intron		5	-1	128989849	719
ENSMUSG00000089824	protein_coding	Rbm12	ENSMUST00000131377	protein_coding		2	-1	156111916	1058
ENSMUSG00000000215	protein_coding	Ins2	ENSMUST00000105933	protein_coding	principal1	7	-1	142679698	552
ENSMUSG00000089824	protein_coding	Rbm12	ENSMUST00000128499	protein_coding		2	-1	156111978	574
ENSMUSG00000075611	unprocessed_pseudogene	Gm11545	ENSMUST00000146507	unprocessed_pseudogene		11	-1	94757763	375
ENSMUSG00000089824	protein_coding	Rbm12	ENSMUST00000138068	protein_coding		2	-1	156111961	560
ENSMUSG00000047992	protein_coding	Dipk1c	ENSMUST00000161429	protein_coding	principal1	18	1	84720019	1387
ENSMUSG00000046020	protein_coding	Pofut1	ENSMUST00000170297	nonsense_mediated_decay		2	1	153241541	1135
ENSMUSG00000114548	processed_pseudogene	Gm6785	ENSMUST00000223948	processed_pseudogene		14	-1	19015937	1176
ENSMUSG00000030512	protein_coding	Snrpa1	ENSMUST00000032723	nonsense_mediated_decay		7	1	66060544	955
ENSMUSG00000046020	protein_coding	Pofut1	ENSMUST00000099191	nonsense_mediated_decay		2	1	153241541	839
ENSMUSG00000046020	protein_coding	Pofut1	ENSMUST00000099192	protein_coding		2	1	153241551	1385
ENSMUSG00000047992	protein_coding	Dipk1c	ENSMUST00000237435	nonsense_mediated_decay		18	1	84720245	610
ENSMUSG00000000215	protein_coding	Ins2	ENSMUST00000000220	protein_coding	principal1	7	-1	142679726	478
ENSMUSG00000114435	unprocessed_pseudogene	Gm3778	ENSMUST00000224167	unprocessed_pseudogene		14	1	19016757	962
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000231168	nonsense_mediated_decay		15	1	78597074	1627
ENSMUSG00000047992	protein_coding	Dipk1c	ENSMUST00000159800	nonsense_mediated_decay		18	1	84720277	430
ENSMUSG00000018849	protein_coding	Wwc1	ENSMUST00000018993	protein_coding	principal1	11	-1	35980527	4531
ENSMUSG00000030512	protein_coding	Snrpa1	ENSMUST00000139082	retained_intron		7	1	66060564	2026
ENSMUSG00000030512	protein_coding	Snrpa1	ENSMUST00000206409	processed_transcript		7	1	66060603	459
ENSMUSG00000046020	protein_coding	Pofut1	ENSMUST00000123158	retained_intron		2	1	153241569	2413
ENSMUSG00000030512	protein_coding	Snrpa1	ENSMUST00000138271	processed_transcript		7	1	66060781	262
ENSMUSG00000046020	protein_coding	Pofut1	ENSMUST00000109794	protein_coding		2	1	153241578	1688
ENSMUSG00000030512	protein_coding	Snrpa1	ENSMUST00000147702	retained_intron		7	1	66068852	462
ENSMUSG00000018849	protein_coding	Wwc1	ENSMUST00000131001	processed_transcript		11	-1	35853554	359
ENSMUSG00000037190	protein_coding	Cyb561d2	ENSMUST00000041459	protein_coding	principal1	9	-1	107541865	1786
ENSMUSG00000074673	protein_coding	Ttll9	ENSMUST00000152158	nonsense_mediated_decay		2	1	152962506	1556
ENSMUSG00000047992	protein_coding	Dipk1c	ENSMUST00000161033	processed_transcript		18	1	84720883	621
ENSMUSG00000018849	protein_coding	Wwc1	ENSMUST00000127086	processed_transcript		11	-1	35875712	728
ENSMUSG00000000215	protein_coding	Ins2	ENSMUST00000105932	protein_coding	principal1	7	-1	142679717	455
ENSMUSG00000029428	protein_coding	Stx2	ENSMUST00000141492	processed_transcript		5	-1	129008423	711
ENSMUSG00000046020	protein_coding	Pofut1	ENSMUST00000123487	protein_coding		2	1	153257482	4143
ENSMUSG00000033773	protein_coding	Rpap2	ENSMUST00000112650	protein_coding	alternative2	5	1	107597373	2992
ENSMUSG00000030144	protein_coding	Clec4d	ENSMUST00000204826	nonsense_mediated_decay		6	1	123262111	910
ENSMUSG00000074673	protein_coding	Ttll9	ENSMUST00000146626	nonsense_mediated_decay		2	1	152962506	1278
ENSMUSG00000027067	protein_coding	Ssrp1	ENSMUST00000077798	protein_coding	principal1	2	1	85037234	2739
ENSMUSG00000046020	protein_coding	Pofut1	ENSMUST00000152390	protein_coding		2	1	153257572	4833
ENSMUSG00000000215	protein_coding	Ins2	ENSMUST00000125933	protein_coding		7	-1	142679580	259
ENSMUSG00000029428	protein_coding	Stx2	ENSMUST00000151712	retained_intron		5	-1	129008549	1127
ENSMUSG00000037640	protein_coding	Zfp60	ENSMUST00000108336	protein_coding	principal1	7	1	27731389	5896
ENSMUSG00000080317	unprocessed_pseudogene	Vmn2r-ps94	ENSMUST00000116665	unprocessed_pseudogene		13	1	33766920	2373
ENSMUSG00000029428	protein_coding	Stx2	ENSMUST00000195906	nonsense_mediated_decay		5	-1	129008444	374
ENSMUSG00000000215	protein_coding	Ins2	ENSMUST00000162317	protein_coding		7	-1	142679533	297
ENSMUSG00000006389	protein_coding	Mpl	ENSMUST00000102671	protein_coding	principal3	4	-1	118457513	2934
ENSMUSG00000029428	protein_coding	Stx2	ENSMUST00000149877	protein_coding		5	-1	128999635	361
ENSMUSG00000094725	processed_pseudogene	Gm15251	ENSMUST00000177947	processed_pseudogene		X	1	3959863	883
ENSMUSG00000074673	protein_coding	Ttll9	ENSMUST00000103155	protein_coding		2	1	152962506	1552
ENSMUSG00000027067	protein_coding	Ssrp1	ENSMUST00000130729	protein_coding		2	1	85037455	2069
ENSMUSG00000037640	protein_coding	Zfp60	ENSMUST00000126884	retained_intron		7	1	27731411	1803
ENSMUSG00000047992	protein_coding	Dipk1c	ENSMUST00000235504	protein_coding		18	1	84720883	2237
ENSMUSG00000029428	protein_coding	Stx2	ENSMUST00000199813	retained_intron		5	-1	129008546	653
ENSMUSG00000037190	protein_coding	Cyb561d2	ENSMUST00000195235	protein_coding	principal1	9	-1	107542193	1162
ENSMUSG00000096733	processed_pseudogene	Gm15257	ENSMUST00000177680	processed_pseudogene		X	1	4033924	883
ENSMUSG00000102759	TEC	Gm10463	ENSMUST00000195772	TEC		5	-1	32133171	2889
ENSMUSG00000024072	protein_coding	Yipf4	ENSMUST00000024873	protein_coding	principal1	17	1	74489493	2133
ENSMUSG00000037640	protein_coding	Zfp60	ENSMUST00000130997	protein_coding		7	1	27731432	572
ENSMUSG00000102759	TEC	Gm10463	ENSMUST00000192674	TEC		5	-1	32133168	2886
ENSMUSG00000074673	protein_coding	Ttll9	ENSMUST00000109801	nonsense_mediated_decay		2	1	152962511	1239
ENSMUSG00000074673	protein_coding	Ttll9	ENSMUST00000165343	nonsense_mediated_decay		2	1	152972288	1284
ENSMUSG00000072541	processed_pseudogene	Gm5046	ENSMUST00000100608	processed_pseudogene		15	1	65015154	611
ENSMUSG00000047992	protein_coding	Dipk1c	ENSMUST00000052501	protein_coding		18	1	84720242	2153
ENSMUSG00000037640	protein_coding	Zfp60	ENSMUST00000136373	nonsense_mediated_decay		7	1	27731443	811
ENSMUSG00000037190	protein_coding	Cyb561d2	ENSMUST00000194344	protein_coding		9	-1	107541525	413
ENSMUSG00000074673	protein_coding	Ttll9	ENSMUST00000155631	protein_coding		2	1	152973568	428
ENSMUSG00000038324	protein_coding	Trpc4ap	ENSMUST00000041059	protein_coding	alternative2	2	-1	155692384	3204
ENSMUSG00000115677	processed_pseudogene	Gm49241	ENSMUST00000228465	processed_pseudogene		15	1	65041574	494
ENSMUSG00000037640	protein_coding	Zfp60	ENSMUST00000042641	protein_coding	principal1	7	1	27731511	2727
ENSMUSG00000074673	protein_coding	Ttll9	ENSMUST00000151641	retained_intron		2	1	152989459	526
ENSMUSG00000037640	protein_coding	Zfp60	ENSMUST00000125228	retained_intron		7	1	27736367	891
ENSMUSG00000027067	protein_coding	Ssrp1	ENSMUST00000123467	processed_transcript		2	1	85037453	745
ENSMUSG00000037190	protein_coding	Cyb561d2	ENSMUST00000194906	processed_transcript		9	-1	107542124	637
ENSMUSG00000037640	protein_coding	Zfp60	ENSMUST00000141753	retained_intron		7	1	27736927	451
ENSMUSG00000027067	protein_coding	Ssrp1	ENSMUST00000135414	processed_transcript		2	1	85037533	920
ENSMUSG00000037640	protein_coding	Zfp60	ENSMUST00000167955	protein_coding	principal1	7	1	27736956	2115
ENSMUSG00000097164	bidirectional_promoter_lncRNA	Cep83os	ENSMUST00000181906	bidirectional_promoter_lncRNA		10	-1	94688576	6566
ENSMUSG00000027067	protein_coding	Ssrp1	ENSMUST00000146530	processed_transcript		2	1	85040112	679
ENSMUSG00000078218	protein_coding	Btbd35f3	ENSMUST00000140300	protein_coding	principal1	X	1	4037674	1943
ENSMUSG00000037190	protein_coding	Cyb561d2	ENSMUST00000194967	nonsense_mediated_decay		9	-1	107542127	658
ENSMUSG00000024072	protein_coding	Yipf4	ENSMUST00000234432	nonsense_mediated_decay		17	1	74489550	1991
ENSMUSG00000006389	protein_coding	Mpl	ENSMUST00000168404	protein_coding		4	-1	118457470	2091
ENSMUSG00000112203	TEC	Gm49167	ENSMUST00000218768	TEC		10	1	94685705	2915
ENSMUSG00000027067	protein_coding	Ssrp1	ENSMUST00000142359	processed_transcript		2	1	85041174	550
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000230705	processed_transcript		15	1	78597104	803
ENSMUSG00000074673	protein_coding	Ttll9	ENSMUST00000150218	retained_intron		2	1	153002781	1816
ENSMUSG00000024072	protein_coding	Yipf4	ENSMUST00000234448	processed_transcript		17	1	74489936	1082
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000229256	nonsense_mediated_decay		15	1	78597118	367
ENSMUSG00000085978	processed_pseudogene	Gm15258	ENSMUST00000153801	processed_pseudogene		X	-1	4075762	741
ENSMUSG00000038324	protein_coding	Trpc4ap	ENSMUST00000103140	protein_coding	principal3	2	-1	155692332	3091
ENSMUSG00000027067	protein_coding	Ssrp1	ENSMUST00000145097	processed_transcript		2	1	85045251	679
ENSMUSG00000101750	protein_coding	Olfr1392	ENSMUST00000217275	protein_coding	principal1	11	1	49285282	3098
ENSMUSG00000089898	antisense	Gm14199	ENSMUST00000130021	antisense		2	-1	152991631	495
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000230041	retained_intron		15	1	78597142	396
ENSMUSG00000024072	protein_coding	Yipf4	ENSMUST00000235064	processed_transcript		17	1	74491844	343
ENSMUSG00000037280	protein_coding	Galnt6	ENSMUST00000159715	protein_coding	principal1	15	-1	100729376	3796
ENSMUSG00000027067	protein_coding	Ssrp1	ENSMUST00000127069	processed_transcript		2	1	85045355	451
ENSMUSG00000024072	protein_coding	Yipf4	ENSMUST00000234853	processed_transcript		17	1	74493928	166
ENSMUSG00000030144	protein_coding	Clec4d	ENSMUST00000032240	protein_coding	principal1	6	1	123262117	1323
ENSMUSG00000116834	processed_pseudogene	Gm18020	ENSMUST00000232327	processed_pseudogene		16	-1	92010411	448
ENSMUSG00000006389	protein_coding	Mpl	ENSMUST00000006556	protein_coding	alternative2	4	-1	118457495	2083
ENSMUSG00000038324	protein_coding	Trpc4ap	ENSMUST00000153246	processed_transcript		2	-1	155637736	890
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000229796	protein_coding		15	1	78597142	364
ENSMUSG00000115672	processed_pseudogene	Gm7814	ENSMUST00000227660	processed_pseudogene		15	1	65195339	440
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000229295	protein_coding		15	1	78597142	381
ENSMUSG00000101750	protein_coding	Olfr1392	ENSMUST00000214598	protein_coding	principal1	11	1	49285282	3506
ENSMUSG00000038324	protein_coding	Trpc4ap	ENSMUST00000143115	retained_intron		2	-1	155637782	838
ENSMUSG00000101750	protein_coding	Olfr1392	ENSMUST00000214516	processed_transcript		11	1	49285285	2846
ENSMUSG00000101750	protein_coding	Olfr1392	ENSMUST00000215861	protein_coding	principal1	11	1	49285285	3670
ENSMUSG00000030144	protein_coding	Clec4d	ENSMUST00000203421	retained_intron		6	1	123267722	593
ENSMUSG00000027067	protein_coding	Ssrp1	ENSMUST00000168266	protein_coding	principal1	2	1	85037451	2721
ENSMUSG00000006389	protein_coding	Mpl	ENSMUST00000106375	protein_coding	alternative2	4	-1	118457450	1701
ENSMUSG00000081742	processed_pseudogene	Gm9051	ENSMUST00000119335	processed_pseudogene		X	-1	96225727	1035
ENSMUSG00000045763	protein_coding	Basp1	ENSMUST00000058845	protein_coding	principal1	15	-1	25413764	1855
ENSMUSG00000024503	protein_coding	Spink1	ENSMUST00000025381	protein_coding	principal1	18	-1	43737557	729
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000229717	nonsense_mediated_decay		15	1	78597142	634
ENSMUSG00000101750	protein_coding	Olfr1392	ENSMUST00000214170	protein_coding	principal1	11	1	49285296	3507
ENSMUSG00000006389	protein_coding	Mpl	ENSMUST00000216417	retained_intron		4	-1	118457495	433
ENSMUSG00000037280	protein_coding	Galnt6	ENSMUST00000052069	protein_coding	principal1	15	-1	100729376	3798
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000231176	processed_transcript		15	1	78597142	3110
ENSMUSG00000101750	protein_coding	Olfr1392	ENSMUST00000213684	processed_transcript		11	1	49285328	2970
ENSMUSG00000049741	protein_coding	Rxfp4	ENSMUST00000063119	protein_coding	principal1	3	-1	88653142	1245
ENSMUSG00000045763	protein_coding	Basp1	ENSMUST00000228597	protein_coding		15	-1	25413698	363
ENSMUSG00000106112	antisense	Gm43434	ENSMUST00000196615	antisense		14	-1	54146287	676
ENSMUSG00000117358	processed_transcript	Gm31645	ENSMUST00000235009	bidirectional_promoter_lncRNA		17	-1	74527644	327
ENSMUSG00000117358	processed_transcript	Gm31645	ENSMUST00000234433	bidirectional_promoter_lncRNA		17	-1	74528094	1389
ENSMUSG00000101750	protein_coding	Olfr1392	ENSMUST00000189851	protein_coding	principal1	11	1	49293297	1018
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000229248	nonsense_mediated_decay		15	1	78597149	2590
ENSMUSG00000071073	protein_coding	Lrrc73	ENSMUST00000233692	protein_coding	principal1	17	1	46253531	2010
ENSMUSG00000115066	processed_pseudogene	Gm49242	ENSMUST00000227626	processed_pseudogene		15	-1	65200562	329
ENSMUSG00000117358	processed_transcript	Gm31645	ENSMUST00000234285	lincRNA		17	-1	74523578	370
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000229233	retained_intron		15	1	78605797	199
ENSMUSG00000076871	TR_J_gene	Trdj2	ENSMUST00000103683	TR_J_gene	principal1	14	1	54136779	59
ENSMUSG00000037280	protein_coding	Galnt6	ENSMUST00000161514	protein_coding	principal1	15	-1	100720477	2746
ENSMUSG00000039745	protein_coding	Htatip2	ENSMUST00000085272	protein_coding	principal3	7	1	49759129	1418
ENSMUSG00000071073	protein_coding	Lrrc73	ENSMUST00000233341	retained_intron		17	1	46253984	2445
ENSMUSG00000018008	protein_coding	Cyth4	ENSMUST00000230583	retained_intron		15	1	78611233	1223
ENSMUSG00000105218	lincRNA	Gm38413	ENSMUST00000198449	lincRNA		5	-1	99753973	2348
ENSMUSG00000039745	protein_coding	Htatip2	ENSMUST00000207895	protein_coding	alternative2	7	1	49759153	1338
ENSMUSG00000038324	protein_coding	Trpc4ap	ENSMUST00000152548	retained_intron		2	-1	155673051	3907
ENSMUSG00000090062	antisense	Galnt6os	ENSMUST00000229209	antisense		15	1	100695773	561
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000207226	processed_transcript		19	1	26715884	876
ENSMUSG00000105218	lincRNA	Gm38413	ENSMUST00000197852	lincRNA		5	-1	99753511	348
ENSMUSG00000071073	protein_coding	Lrrc73	ENSMUST00000233543	nonsense_mediated_decay		17	1	46254166	1116
ENSMUSG00000104876	TR_C_gene	Trdc	ENSMUST00000196323	TR_C_gene	principal1	14	1	54142851	3865
ENSMUSG00000038324	protein_coding	Trpc4ap	ENSMUST00000146484	retained_intron		2	-1	155640540	648
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000176700	retained_intron		19	1	26716115	867
ENSMUSG00000117105	lincRNA	Dreh	ENSMUST00000233348	lincRNA		17	1	64767111	727
ENSMUSG00000038324	protein_coding	Trpc4ap	ENSMUST00000140370	retained_intron		2	-1	155663822	2026
ENSMUSG00000030513	protein_coding	Pcsk6	ENSMUST00000176199	protein_coding		7	1	65861734	619
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000176494	processed_transcript		19	1	26721948	426
ENSMUSG00000090062	antisense	Galnt6os	ENSMUST00000229410	antisense		15	1	100695780	726
ENSMUSG00000076873	TR_V_gene	Trdv5	ENSMUST00000103685	TR_V_gene	principal1	14	-1	54149294	438
ENSMUSG00000114978	lincRNA	Gm48925	ENSMUST00000227704	lincRNA		14	-1	55937595	397
ENSMUSG00000033773	protein_coding	Rpap2	ENSMUST00000112651	protein_coding	alternative2	5	1	107597696	2321
ENSMUSG00000071073	protein_coding	Lrrc73	ENSMUST00000095262	protein_coding		17	1	46254190	1317
ENSMUSG00000038324	protein_coding	Trpc4ap	ENSMUST00000130755	retained_intron		2	-1	155692382	1516
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000207944	processed_transcript		19	1	26729999	681
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000207418	processed_transcript		19	1	26745209	576
ENSMUSG00000038324	protein_coding	Trpc4ap	ENSMUST00000147913	retained_intron		2	-1	155668478	443
ENSMUSG00000090062	antisense	Galnt6os	ENSMUST00000160960	antisense		15	1	100695780	1389
ENSMUSG00000038324	protein_coding	Trpc4ap	ENSMUST00000136764	processed_transcript		2	-1	155692123	355
ENSMUSG00000028893	protein_coding	Sesn2	ENSMUST00000030724	protein_coding	principal1	4	-1	132510501	3475
ENSMUSG00000113463	lincRNA	4930520P13Rik	ENSMUST00000222622	lincRNA		13	1	70232822	505
ENSMUSG00000024088	protein_coding	4930583I09Rik	ENSMUST00000232860	lincRNA		17	-1	64836071	630
ENSMUSG00000046993	processed_pseudogene	Gm5637	ENSMUST00000153890	processed_pseudogene		X	-1	60046229	1119
ENSMUSG00000100346	processed_pseudogene	Gm28996	ENSMUST00000190316	processed_pseudogene		9	-1	104344851	721
ENSMUSG00000029135	protein_coding	Fosl2	ENSMUST00000031017	protein_coding	principal1	5	1	32135801	6537
ENSMUSG00000100923	protein_coding	Olfr10	ENSMUST00000217290	protein_coding	principal1	11	1	49304741	2776
ENSMUSG00000024088	protein_coding	4930583I09Rik	ENSMUST00000024896	protein_coding	principal1	17	-1	64836071	630
ENSMUSG00000081341	processed_pseudogene	Gm14891	ENSMUST00000117378	processed_pseudogene		X	1	60051001	596
ENSMUSG00000036985	protein_coding	Zdhhc9	ENSMUST00000037960	protein_coding	principal1	X	-1	48208687	2982
ENSMUSG00000086997	antisense	Gm12981	ENSMUST00000131733	antisense		4	-1	132509649	622
ENSMUSG00000116234	processed_pseudogene	Gm49550	ENSMUST00000230768	processed_pseudogene		15	-1	76527021	252
ENSMUSG00000117203	processed_pseudogene	Gm4701	ENSMUST00000233516	processed_pseudogene		17	1	64876201	724
ENSMUSG00000027186	protein_coding	Elf5	ENSMUST00000239273	protein_coding		2	1	103411688	2530
ENSMUSG00000100923	protein_coding	Olfr10	ENSMUST00000187570	protein_coding	principal1	11	1	49317548	942
ENSMUSG00000029135	protein_coding	Fosl2	ENSMUST00000201110	retained_intron		5	1	32136173	3472
ENSMUSG00000099599	lincRNA	Gm28548	ENSMUST00000191599	lincRNA		9	1	104361832	409
ENSMUSG00000036985	protein_coding	Zdhhc9	ENSMUST00000088935	protein_coding	principal1	X	-1	48208878	2815
ENSMUSG00000116376	protein_coding	Tmem249	ENSMUST00000230604	protein_coding	principal1	15	-1	76534931	945
ENSMUSG00000029135	protein_coding	Fosl2	ENSMUST00000202169	retained_intron		5	1	32146521	1707
ENSMUSG00000095197	IG_V_gene	Ighv1-59	ENSMUST00000195359	IG_V_gene	principal5	12	-1	115335514	351
ENSMUSG00000081571	processed_pseudogene	Gm12125	ENSMUST00000117261	processed_pseudogene		11	1	35996054	736
ENSMUSG00000116504	processed_transcript	I730030J21Rik	ENSMUST00000230515	retained_intron		15	-1	100732720	2139
ENSMUSG00000095197	IG_V_gene	Ighv1-59	ENSMUST00000103530	IG_V_gene	alternative2	12	-1	115335514	348
ENSMUSG00000027186	protein_coding	Elf5	ENSMUST00000137973	retained_intron		2	1	103411713	3262
ENSMUSG00000107220	processed_pseudogene	Gm9555	ENSMUST00000200908	processed_pseudogene		5	1	32185497	583
ENSMUSG00000106829	processed_pseudogene	Gm3786	ENSMUST00000202659	processed_pseudogene		5	-1	117294406	378
ENSMUSG00000116376	protein_coding	Tmem249	ENSMUST00000229074	processed_transcript		15	-1	76535366	1014
ENSMUSG00000102246	TEC	9430037O13Rik	ENSMUST00000192556	TEC		1	-1	191536892	1008
ENSMUSG00000116504	processed_transcript	I730030J21Rik	ENSMUST00000231090	lincRNA		15	-1	100732737	654
ENSMUSG00000106714	TEC	Gm42546	ENSMUST00000201584	TEC		5	1	117299889	2592
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000101018	protein_coding	principal1	12	1	112722174	6641
ENSMUSG00000037849	protein_coding	Ifi206	ENSMUST00000160565	protein_coding	principal1	1	-1	173491041	3047
ENSMUSG00000037849	protein_coding	Ifi206	ENSMUST00000169797	protein_coding		1	-1	173473926	429
ENSMUSG00000116504	processed_transcript	I730030J21Rik	ENSMUST00000230334	lincRNA		15	-1	100732679	580
ENSMUSG00000036985	protein_coding	Zdhhc9	ENSMUST00000123054	retained_intron		X	-1	48208665	1388
ENSMUSG00000097163	lincRNA	BC051077	ENSMUST00000181440	lincRNA		5	-1	117315645	2044
ENSMUSG00000036718	protein_coding	Micall2	ENSMUST00000170773	protein_coding		5	-1	139732834	3157
ENSMUSG00000036985	protein_coding	Zdhhc9	ENSMUST00000127440	retained_intron		X	-1	48208602	3432
ENSMUSG00000062753	protein_coding	AI413582	ENSMUST00000154473	protein_coding	principal1	17	-1	27565756	862
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000222711	protein_coding	principal1	12	1	112722194	6566
ENSMUSG00000018919	protein_coding	Tm4sf5	ENSMUST00000019063	protein_coding	principal1	11	1	70505244	1000
ENSMUSG00000062753	protein_coding	AI413582	ENSMUST00000231365	retained_intron		17	-1	27565123	1204
ENSMUSG00000062753	protein_coding	AI413582	ENSMUST00000232276	protein_coding	principal1	17	-1	27565666	860
ENSMUSG00000036985	protein_coding	Zdhhc9	ENSMUST00000132652	processed_transcript		X	-1	48208328	1102
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000220627	protein_coding		12	1	112724619	5395
ENSMUSG00000085802	antisense	Gm16059	ENSMUST00000135583	antisense		15	1	79427220	3778
ENSMUSG00000062753	protein_coding	AI413582	ENSMUST00000145183	protein_coding	principal1	17	-1	27565667	992
ENSMUSG00000036985	protein_coding	Zdhhc9	ENSMUST00000149416	processed_transcript		X	-1	48208658	866
ENSMUSG00000010057	protein_coding	Nprl2	ENSMUST00000010201	protein_coding	principal1	9	1	107542226	1441
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000221570	retained_intron		12	1	112731214	343
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000223104	retained_intron		12	1	112737238	746
ENSMUSG00000062753	protein_coding	AI413582	ENSMUST00000080190	nonsense_mediated_decay		17	-1	27565708	677
ENSMUSG00000018919	protein_coding	Tm4sf5	ENSMUST00000179986	processed_transcript		11	1	70509970	478
ENSMUSG00000069248	protein_coding	Serpinb6e	ENSMUST00000110275	protein_coding	principal1	13	-1	33843408	1494
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000222532	retained_intron		12	1	112740386	746
ENSMUSG00000018919	protein_coding	Tm4sf5	ENSMUST00000141924	retained_intron		11	1	70510206	456
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000222612	retained_intron		12	1	112743281	478
ENSMUSG00000062753	protein_coding	AI413582	ENSMUST00000232203	protein_coding		17	-1	27565676	545
ENSMUSG00000114054	processed_pseudogene	Gm47706	ENSMUST00000220989	processed_pseudogene		13	-1	70422781	291
ENSMUSG00000059189	protein_coding	Olfr913	ENSMUST00000081095	protein_coding	principal1	9	1	38592759	2441
ENSMUSG00000069248	protein_coding	Serpinb6e	ENSMUST00000145221	protein_coding		13	-1	33843408	381
ENSMUSG00000010057	protein_coding	Nprl2	ENSMUST00000195370	nonsense_mediated_decay		9	1	107542241	829
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000221853	retained_intron		12	1	112743588	457
ENSMUSG00000087589	processed_transcript	D430040D24Rik	ENSMUST00000194426	retained_intron		1	1	36557701	1967
ENSMUSG00000096035	protein_coding	Odaph	ENSMUST00000201568	retained_intron		5	1	91987475	2830
ENSMUSG00000062753	protein_coding	AI413582	ENSMUST00000231948	nonsense_mediated_decay		17	-1	27565726	608
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000221125	retained_intron		12	1	112743964	417
ENSMUSG00000087589	processed_transcript	D430040D24Rik	ENSMUST00000149224	antisense		1	1	36558359	910
ENSMUSG00000027650	protein_coding	Tti1	ENSMUST00000029179	protein_coding	principal1	2	-1	158028433	3830
ENSMUSG00000022096	protein_coding	Hr	ENSMUST00000161069	protein_coding	principal2	14	1	70553687	5607
ENSMUSG00000096035	protein_coding	Odaph	ENSMUST00000178614	protein_coding	principal1	5	1	91987475	760
ENSMUSG00000033773	protein_coding	Rpap2	ENSMUST00000112654	protein_coding	alternative2	5	1	107597717	2914
ENSMUSG00000027650	protein_coding	Tti1	ENSMUST00000124338	protein_coding		2	-1	158011298	783
ENSMUSG00000027186	protein_coding	Elf5	ENSMUST00000028609	protein_coding	principal1	2	1	103424062	2222
ENSMUSG00000062753	protein_coding	AI413582	ENSMUST00000231753	protein_coding		17	-1	27565717	563
ENSMUSG00000038791	protein_coding	Scgb3a2	ENSMUST00000187157	protein_coding	principal1	18	1	43764289	550
ENSMUSG00000027650	protein_coding	Tti1	ENSMUST00000126541	processed_transcript		2	-1	158007212	774
ENSMUSG00000027186	protein_coding	Elf5	ENSMUST00000126290	protein_coding		2	1	103424828	658
ENSMUSG00000033773	protein_coding	Rpap2	ENSMUST00000147284	processed_transcript		5	1	107597721	425
ENSMUSG00000010057	protein_coding	Nprl2	ENSMUST00000193628	retained_intron		9	1	107542245	1736
ENSMUSG00000036718	protein_coding	Micall2	ENSMUST00000044642	protein_coding	principal1	5	-1	139736336	3346
ENSMUSG00000027186	protein_coding	Elf5	ENSMUST00000123793	processed_transcript		2	1	103446879	727
ENSMUSG00000040697	protein_coding	Dnajc16	ENSMUST00000038014	protein_coding	principal1	4	-1	141790891	5969
ENSMUSG00000010057	protein_coding	Nprl2	ENSMUST00000194848	retained_intron		9	1	107542261	637
ENSMUSG00000027186	protein_coding	Elf5	ENSMUST00000152055	processed_transcript		2	1	103448738	623
ENSMUSG00000062753	protein_coding	AI413582	ENSMUST00000138728	retained_intron		17	-1	27565749	785
ENSMUSG00000033773	protein_coding	Rpap2	ENSMUST00000065422	protein_coding	principal3	5	1	107597735	2268
ENSMUSG00000027650	protein_coding	Tti1	ENSMUST00000109522	protein_coding	principal1	2	-1	158009362	3765
ENSMUSG00000010057	protein_coding	Nprl2	ENSMUST00000192951	retained_intron		9	1	107543978	391
ENSMUSG00000038831	protein_coding	Ralgps1	ENSMUST00000131298	protein_coding	alternative1	2	-1	33371429	6035
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000179041	protein_coding	principal1	12	1	112722194	6565
ENSMUSG00000040697	protein_coding	Dnajc16	ENSMUST00000138654	processed_transcript		4	-1	141774653	785
ENSMUSG00000117336	processed_pseudogene	Gm49865	ENSMUST00000233948	processed_pseudogene		17	-1	65169203	690
ENSMUSG00000022096	protein_coding	Hr	ENSMUST00000022691	protein_coding	principal2	14	1	70554056	5487
ENSMUSG00000040697	protein_coding	Dnajc16	ENSMUST00000153880	protein_coding		4	-1	141790931	464
ENSMUSG00000033773	protein_coding	Rpap2	ENSMUST00000112655	protein_coding	alternative2	5	1	107597774	2686
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208705	protein_coding		19	1	26747600	745
ENSMUSG00000027186	protein_coding	Elf5	ENSMUST00000164172	protein_coding	principal1	2	1	103411688	2532
ENSMUSG00000114224	processed_pseudogene	Gm34440	ENSMUST00000224211	processed_pseudogene		14	1	19035852	501
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208751	protein_coding		19	1	26747603	1846
ENSMUSG00000114318	processed_pseudogene	Gm48781	ENSMUST00000225809	processed_pseudogene		14	1	19043184	242
ENSMUSG00000022096	protein_coding	Hr	ENSMUST00000163060	protein_coding	alternative2	14	1	70555900	5278
ENSMUSG00000033773	protein_coding	Rpap2	ENSMUST00000150074	protein_coding		5	1	107597961	456
ENSMUSG00000072825	protein_coding	Cep170b	ENSMUST00000092279	protein_coding		12	1	112722194	3817
ENSMUSG00000102300	antisense	Gm34106	ENSMUST00000193782	antisense		9	-1	107550768	503
ENSMUSG00000033773	protein_coding	Rpap2	ENSMUST00000129483	protein_coding		5	1	107597982	514
ENSMUSG00000027186	protein_coding	Elf5	ENSMUST00000171693	protein_coding	principal1	2	1	103424126	965
ENSMUSG00000038831	protein_coding	Ralgps1	ENSMUST00000042615	protein_coding		2	-1	33371481	6029
ENSMUSG00000038791	protein_coding	Scgb3a2	ENSMUST00000043803	protein_coding		18	1	43764327	842
ENSMUSG00000085225	antisense	Gm14637	ENSMUST00000156516	antisense		2	1	170576054	444
ENSMUSG00000036718	protein_coding	Micall2	ENSMUST00000164584	retained_intron		5	-1	139710227	891
ENSMUSG00000097035	lincRNA	Gm26692	ENSMUST00000180428	lincRNA		5	-1	107688010	688
ENSMUSG00000038791	protein_coding	Scgb3a2	ENSMUST00000189750	protein_coding		18	1	43764327	578
ENSMUSG00000036718	protein_coding	Micall2	ENSMUST00000165645	nonsense_mediated_decay		5	-1	139711619	558
ENSMUSG00000106631	protein_coding	Gm42669	ENSMUST00000143074	protein_coding		5	1	107507621	3445
ENSMUSG00000027475	protein_coding	Kif3b	ENSMUST00000028977	protein_coding	principal1	2	1	153291413	5635
ENSMUSG00000093767	unprocessed_pseudogene	Vmn2r-ps13	ENSMUST00000176920	unprocessed_pseudogene		3	1	64898855	1005
ENSMUSG00000066894	protein_coding	Vsig10	ENSMUST00000111967	protein_coding	principal2	5	1	117319083	4236
ENSMUSG00000032564	protein_coding	Cpne4	ENSMUST00000098443	protein_coding		9	1	104547286	1421
ENSMUSG00000028690	protein_coding	Mmachc	ENSMUST00000030453	protein_coding	principal1	4	-1	116708406	2106
ENSMUSG00000022225	protein_coding	Cma1	ENSMUST00000226280	protein_coding	alternative2	14	-1	55944675	1090
ENSMUSG00000116574	lincRNA	Gm18870	ENSMUST00000231727	lincRNA		16	1	63003438	1432
ENSMUSG00000066894	protein_coding	Vsig10	ENSMUST00000086464	protein_coding	alternative2	5	1	117319292	2052
ENSMUSG00000017421	protein_coding	Zfp207	ENSMUST00000178665	nonsense_mediated_decay		11	1	80383279	2898
ENSMUSG00000038831	protein_coding	Ralgps1	ENSMUST00000113165	protein_coding		2	-1	33371486	6192
ENSMUSG00000032564	protein_coding	Cpne4	ENSMUST00000157006	protein_coding		9	1	104566677	549
ENSMUSG00000106631	protein_coding	Gm42669	ENSMUST00000160160	protein_coding	principal1	5	1	107508944	3080
ENSMUSG00000028690	protein_coding	Mmachc	ENSMUST00000143330	processed_transcript		4	-1	116708288	478
ENSMUSG00000115700	processed_pseudogene	Gm7517	ENSMUST00000228537	processed_pseudogene		15	1	48888353	1672
ENSMUSG00000022225	protein_coding	Cma1	ENSMUST00000022834	protein_coding	principal2	14	-1	55944661	1074
ENSMUSG00000116612	processed_pseudogene	Gm49621	ENSMUST00000231788	processed_pseudogene		16	1	63111690	496
ENSMUSG00000103992	TEC	Gm38029	ENSMUST00000192669	TEC		3	1	29174838	2090
ENSMUSG00000115462	processed_pseudogene	Gm49185	ENSMUST00000227266	processed_pseudogene		15	1	48900077	235
ENSMUSG00000066894	protein_coding	Vsig10	ENSMUST00000145052	retained_intron		5	1	117319318	1691
ENSMUSG00000102579	TEC	Gm37965	ENSMUST00000195304	TEC		3	1	29219887	1362
ENSMUSG00000038831	protein_coding	Ralgps1	ENSMUST00000091039	protein_coding	principal3	2	-1	33371478	2738
ENSMUSG00000116871	lincRNA	Gm33912	ENSMUST00000231373	lincRNA		16	-1	63217442	730
ENSMUSG00000066894	protein_coding	Vsig10	ENSMUST00000128524	retained_intron		5	1	117319361	572
ENSMUSG00000031378	protein_coding	Abcd1	ENSMUST00000002084	protein_coding	principal1	X	1	73716597	3648
ENSMUSG00000114976	processed_pseudogene	Gm2333	ENSMUST00000227927	processed_pseudogene		15	-1	49130964	342
ENSMUSG00000017421	protein_coding	Zfp207	ENSMUST00000017567	protein_coding	alternative1	11	1	80383303	2245
ENSMUSG00000115775	lincRNA	Gm41318	ENSMUST00000228245	lincRNA		15	1	49194337	691
ENSMUSG00000115179	processed_pseudogene	Gm48927	ENSMUST00000227962	processed_pseudogene		14	-1	55966865	141
ENSMUSG00000029154	protein_coding	Cwh43	ENSMUST00000031040	protein_coding	principal1	5	1	73406075	2716
ENSMUSG00000038831	protein_coding	Ralgps1	ENSMUST00000138704	processed_transcript		2	-1	33158170	727
ENSMUSG00000031378	protein_coding	Abcd1	ENSMUST00000114461	protein_coding		X	1	73716740	2323
ENSMUSG00000017421	protein_coding	Zfp207	ENSMUST00000108216	protein_coding		11	1	80383331	2152
ENSMUSG00000116752	lincRNA	Gm49622	ENSMUST00000231817	lincRNA		16	-1	63492117	695
ENSMUSG00000079429	protein_coding	Mroh2a	ENSMUST00000148474	processed_transcript		1	1	88226986	654
ENSMUSG00000038831	protein_coding	Ralgps1	ENSMUST00000113164	retained_intron		2	-1	33371470	1989
ENSMUSG00000066894	protein_coding	Vsig10	ENSMUST00000147182	processed_transcript		5	1	117323646	3946
ENSMUSG00000082844	processed_pseudogene	Gm13537	ENSMUST00000120467	processed_pseudogene		2	1	33323171	267
ENSMUSG00000115446	processed_pseudogene	Gm49186	ENSMUST00000227486	processed_pseudogene		15	1	49913382	640
ENSMUSG00000029154	protein_coding	Cwh43	ENSMUST00000065543	protein_coding		5	1	73406227	2316
ENSMUSG00000115478	lincRNA	Gm49198	ENSMUST00000227182	lincRNA		15	1	50286898	425
ENSMUSG00000066894	protein_coding	Vsig10	ENSMUST00000139026	processed_transcript		5	1	117349910	2653
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000179474	protein_coding	principal3	7	-1	105400054	10853
ENSMUSG00000035478	protein_coding	Mbd3	ENSMUST00000142997	protein_coding		10	-1	80395170	1118
ENSMUSG00000029154	protein_coding	Cwh43	ENSMUST00000135820	retained_intron		5	1	73430331	620
ENSMUSG00000078429	protein_coding	Ctdsp2	ENSMUST00000105256	protein_coding	principal1	10	1	126978717	4817
ENSMUSG00000002064	protein_coding	Sdf2	ENSMUST00000002133	protein_coding	principal1	11	1	78245746	1268
ENSMUSG00000072688	antisense	Gm10399	ENSMUST00000202768	antisense		5	-1	117319244	748
ENSMUSG00000072688	antisense	Gm10399	ENSMUST00000100834	antisense		5	-1	117319242	498
ENSMUSG00000019802	protein_coding	Sec63	ENSMUST00000019937	protein_coding	principal1	10	1	42761496	6032
ENSMUSG00000081274	processed_pseudogene	Gm15727	ENSMUST00000122416	processed_pseudogene		5	-1	117349343	437
ENSMUSG00000068289	protein_coding	Cma2	ENSMUST00000228263	protein_coding		14	1	55950980	857
ENSMUSG00000104320	IG_V_pseudogene	Ighv1-60	ENSMUST00000195816	IG_V_pseudogene		12	-1	115345020	405
ENSMUSG00000002064	protein_coding	Sdf2	ENSMUST00000154080	processed_transcript		11	1	78250421	964
ENSMUSG00000073007	protein_coding	Tent5d	ENSMUST00000101292	protein_coding	principal1	X	1	107792590	2995
ENSMUSG00000002064	protein_coding	Sdf2	ENSMUST00000133020	retained_intron		11	1	78250894	586
ENSMUSG00000107503	lincRNA	Gm44009	ENSMUST00000203539	lincRNA		6	-1	128588025	521
ENSMUSG00000073007	protein_coding	Tent5d	ENSMUST00000143975	protein_coding		X	1	107816477	678
ENSMUSG00000010044	protein_coding	Zmynd10	ENSMUST00000010188	protein_coding	principal1	9	1	107547298	1765
ENSMUSG00000078429	protein_coding	Ctdsp2	ENSMUST00000219917	processed_transcript		10	1	126979029	732
ENSMUSG00000073007	protein_coding	Tent5d	ENSMUST00000144695	protein_coding		X	1	107816572	495
ENSMUSG00000078429	protein_coding	Ctdsp2	ENSMUST00000217738	retained_intron		10	1	126995613	723
ENSMUSG00000073007	protein_coding	Tent5d	ENSMUST00000167154	protein_coding	principal1	X	1	107816572	3004
ENSMUSG00000017421	protein_coding	Zfp207	ENSMUST00000053740	protein_coding	principal4	11	1	80383397	1562
ENSMUSG00000010044	protein_coding	Zmynd10	ENSMUST00000195627	processed_transcript		9	1	107547304	411
ENSMUSG00000094087	IG_V_gene	Ighv1-61	ENSMUST00000103531	IG_V_gene	principal1	12	-1	115359572	351
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000211549	nonsense_mediated_decay		7	-1	105384443	931
ENSMUSG00000068289	protein_coding	Cma2	ENSMUST00000089555	protein_coding	principal1	14	1	55971428	947
ENSMUSG00000017421	protein_coding	Zfp207	ENSMUST00000153824	protein_coding		11	1	80385857	720
ENSMUSG00000017421	protein_coding	Zfp207	ENSMUST00000123726	nonsense_mediated_decay		11	1	80389131	3279
ENSMUSG00000004105	protein_coding	Angptl2	ENSMUST00000004208	protein_coding	principal1	2	1	33216069	3339
ENSMUSG00000078429	protein_coding	Ctdsp2	ENSMUST00000105255	protein_coding		10	1	126995613	4136
ENSMUSG00000017421	protein_coding	Zfp207	ENSMUST00000188489	protein_coding	alternative1	11	1	80383279	2898
ENSMUSG00000040761	protein_coding	Spen	ENSMUST00000078886	protein_coding	alternative2	4	-1	141538449	12082
ENSMUSG00000017421	protein_coding	Zfp207	ENSMUST00000165565	protein_coding		11	1	80383279	2311
ENSMUSG00000115592	transcribed_unprocessed_pseudogene	Mcpt-ps1	ENSMUST00000228879	processed_transcript		14	-1	55952350	772
ENSMUSG00000115592	transcribed_unprocessed_pseudogene	Mcpt-ps1	ENSMUST00000228685	transcribed_unprocessed_pseudogene		14	-1	55952341	691
ENSMUSG00000032015	protein_coding	Pou2f3	ENSMUST00000176636	protein_coding	principal2	9	-1	43205755	2522
ENSMUSG00000040761	protein_coding	Spen	ENSMUST00000105786	protein_coding	principal3	4	-1	141538597	12299
ENSMUSG00000004105	protein_coding	Angptl2	ENSMUST00000143252	retained_intron		2	1	33216073	3559
ENSMUSG00000004105	protein_coding	Angptl2	ENSMUST00000139148	retained_intron		2	1	33216098	2306
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000137158	nonsense_mediated_decay		7	-1	105399985	3414
ENSMUSG00000004105	protein_coding	Angptl2	ENSMUST00000193373	protein_coding		2	1	33216117	714
ENSMUSG00000079429	protein_coding	Mroh2a	ENSMUST00000113130	protein_coding	principal2	1	1	88227031	7491
ENSMUSG00000010044	protein_coding	Zmynd10	ENSMUST00000193303	nonsense_mediated_decay		9	1	107547454	1383
ENSMUSG00000040761	protein_coding	Spen	ENSMUST00000147227	processed_transcript		4	-1	141471493	481
ENSMUSG00000032015	protein_coding	Pou2f3	ENSMUST00000034513	protein_coding	alternative2	9	-1	43210369	2610
ENSMUSG00000010044	protein_coding	Zmynd10	ENSMUST00000195158	retained_intron		9	1	107549163	530
ENSMUSG00000085087	antisense	Gm13528	ENSMUST00000139288	antisense		2	1	33177902	410
ENSMUSG00000039813	protein_coding	Tbc1d2	ENSMUST00000084621	protein_coding	principal1	4	-1	46650209	4315
ENSMUSG00000010044	protein_coding	Zmynd10	ENSMUST00000192445	retained_intron		9	1	107550489	611
ENSMUSG00000079429	protein_coding	Mroh2a	ENSMUST00000142632	retained_intron		1	1	88238108	1234
ENSMUSG00000039813	protein_coding	Tbc1d2	ENSMUST00000107750	protein_coding		4	-1	46650209	1941
ENSMUSG00000040761	protein_coding	Spen	ENSMUST00000152411	processed_transcript		4	-1	141488312	1514
ENSMUSG00000079429	protein_coding	Mroh2a	ENSMUST00000135948	protein_coding		1	1	88257758	668
ENSMUSG00000104388	TEC	Gm37033	ENSMUST00000193199	TEC		1	1	180357649	7350
ENSMUSG00000032015	protein_coding	Pou2f3	ENSMUST00000213862	retained_intron		9	-1	43143204	2181
ENSMUSG00000040761	protein_coding	Spen	ENSMUST00000144500	processed_transcript		4	-1	141516909	435
ENSMUSG00000063600	protein_coding	Egfem1	ENSMUST00000124809	protein_coding		3	1	29082023	538
ENSMUSG00000054428	protein_coding	Atpif1	ENSMUST00000152993	protein_coding		4	-1	132533488	462
ENSMUSG00000079429	protein_coding	Mroh2a	ENSMUST00000061013	protein_coding	alternative2	1	1	88227020	7526
ENSMUSG00000027303	protein_coding	Ptpra	ENSMUST00000028769	protein_coding	principal1	2	1	130450278	5325
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000123335	protein_coding		2	1	29889221	403
ENSMUSG00000040761	protein_coding	Spen	ENSMUST00000152081	processed_transcript		4	-1	141538253	680
ENSMUSG00000055676	transcribed_processed_pseudogene	Gm5069	ENSMUST00000050581	processed_transcript		1	-1	180330550	1328
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000148883	retained_intron		2	1	29889234	437
ENSMUSG00000063600	protein_coding	Egfem1	ENSMUST00000146943	protein_coding		3	1	29082300	559
ENSMUSG00000055676	transcribed_processed_pseudogene	Gm5069	ENSMUST00000192714	transcribed_processed_pseudogene		1	-1	180328184	1011
ENSMUSG00000103772	TEC	Gm36933	ENSMUST00000194945	TEC		1	1	180376444	3071
ENSMUSG00000042548	protein_coding	Asxl1	ENSMUST00000227428	protein_coding	alternative2	2	1	153345829	6981
ENSMUSG00000019802	protein_coding	Sec63	ENSMUST00000155410	retained_intron		10	1	42761615	5206
ENSMUSG00000027303	protein_coding	Ptpra	ENSMUST00000230981	protein_coding		2	1	130450302	1386
ENSMUSG00000103123	TEC	Gm37390	ENSMUST00000192452	TEC		1	1	180372669	872
ENSMUSG00000019802	protein_coding	Sec63	ENSMUST00000144228	retained_intron		10	1	42761806	4137
ENSMUSG00000024734	protein_coding	Zp1	ENSMUST00000168708	protein_coding		19	-1	10916298	481
ENSMUSG00000019802	protein_coding	Sec63	ENSMUST00000124613	processed_transcript		10	1	42817928	699
ENSMUSG00000042548	protein_coding	Asxl1	ENSMUST00000109790	protein_coding	principal2	2	1	153345845	6968
ENSMUSG00000042197	protein_coding	Zfp451	ENSMUST00000139143	nonsense_mediated_decay		1	-1	33814385	3578
ENSMUSG00000019802	protein_coding	Sec63	ENSMUST00000105496	processed_transcript		10	1	42817928	752
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000048079	protein_coding	alternative2	7	-1	105400002	3443
ENSMUSG00000027303	protein_coding	Ptpra	ENSMUST00000077303	protein_coding		2	1	130450544	3066
ENSMUSG00000031242	protein_coding	2610002M06Rik	ENSMUST00000120722	protein_coding	principal1	X	-1	107816334	5842
ENSMUSG00000042548	protein_coding	Asxl1	ENSMUST00000123215	processed_transcript		2	1	153347675	355
ENSMUSG00000054428	protein_coding	Atpif1	ENSMUST00000067496	protein_coding	principal1	4	-1	132533659	539
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000020550	protein_coding	principal1	10	1	79682195	1266
ENSMUSG00000063316	protein_coding	Rpl27	ENSMUST00000077856	protein_coding	principal1	11	1	101442298	614
ENSMUSG00000063600	protein_coding	Egfem1	ENSMUST00000126420	retained_intron		3	1	29082577	2722
ENSMUSG00000042548	protein_coding	Asxl1	ENSMUST00000144722	processed_transcript		2	1	153347803	498
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000118726	protein_coding	alternative2	7	-1	105400008	2855
ENSMUSG00000101874	protein_coding	Olfr1391	ENSMUST00000215671	protein_coding	principal1	11	1	49322742	3235
ENSMUSG00000027303	protein_coding	Ptpra	ENSMUST00000230516	retained_intron		2	1	130531970	510
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000183703	protein_coding	principal2	6	-1	119848150	8760
ENSMUSG00000027303	protein_coding	Ptpra	ENSMUST00000230491	retained_intron		2	1	130532671	2954
ENSMUSG00000031242	protein_coding	2610002M06Rik	ENSMUST00000191183	retained_intron		X	-1	107794149	953
ENSMUSG00000063316	protein_coding	Rpl27	ENSMUST00000139939	processed_transcript		11	1	101442438	536
ENSMUSG00000042548	protein_coding	Asxl1	ENSMUST00000138571	retained_intron		2	1	153392860	717
ENSMUSG00000054428	protein_coding	Atpif1	ENSMUST00000145795	retained_intron		4	-1	132533595	1014
ENSMUSG00000101874	protein_coding	Olfr1391	ENSMUST00000187509	protein_coding	principal1	11	1	49327411	938
ENSMUSG00000027303	protein_coding	Ptpra	ENSMUST00000230615	retained_intron		2	1	130533130	759
ENSMUSG00000063316	protein_coding	Rpl27	ENSMUST00000107249	protein_coding	principal1	11	1	101442446	732
ENSMUSG00000087352	antisense	Gm12999	ENSMUST00000124471	antisense		4	1	132532687	485
ENSMUSG00000097099	antisense	Gm9917	ENSMUST00000180865	antisense		9	-1	107568412	5192
ENSMUSG00000027071	protein_coding	P2rx3	ENSMUST00000111613	protein_coding	alternative1	2	-1	85037462	1764
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000220133	retained_intron		10	1	79682303	914
ENSMUSG00000027303	protein_coding	Ptpra	ENSMUST00000229814	retained_intron		2	1	130540337	683
ENSMUSG00000073236	processed_transcript	2500004C02Rik	ENSMUST00000128026	processed_transcript		2	-1	153345810	1898
ENSMUSG00000043583	protein_coding	4930470P17Rik	ENSMUST00000062355	protein_coding	principal1	2	-1	170602017	1395
ENSMUSG00000102765	IG_V_pseudogene	Ighv1-62	ENSMUST00000193406	IG_V_pseudogene		12	-1	115372433	350
ENSMUSG00000097099	antisense	Gm9917	ENSMUST00000181099	antisense		9	-1	107568415	1499
ENSMUSG00000063316	protein_coding	Rpl27	ENSMUST00000127514	protein_coding		11	1	101443612	306
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000219791	protein_coding		10	1	79682404	799
ENSMUSG00000073236	processed_transcript	2500004C02Rik	ENSMUST00000125345	processed_transcript		2	-1	153343221	402
ENSMUSG00000027303	protein_coding	Ptpra	ENSMUST00000230640	retained_intron		2	1	130540483	988
ENSMUSG00000097099	antisense	Gm9917	ENSMUST00000194628	antisense		9	-1	107566931	569
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000219930	protein_coding		10	1	79682462	534
ENSMUSG00000073236	processed_transcript	2500004C02Rik	ENSMUST00000139636	processed_transcript		2	-1	153346073	427
ENSMUSG00000097099	antisense	Gm9917	ENSMUST00000192051	antisense		9	-1	107566787	682
ENSMUSG00000027303	protein_coding	Ptpra	ENSMUST00000229567	retained_intron		2	1	130541625	880
ENSMUSG00000109143	transcribed_unprocessed_pseudogene	Gm10046	ENSMUST00000208208	processed_transcript		7	1	27765673	632
ENSMUSG00000109143	transcribed_unprocessed_pseudogene	Gm10046	ENSMUST00000208942	transcribed_unprocessed_pseudogene		7	1	27770505	126
ENSMUSG00000102332	lincRNA	Gm19331	ENSMUST00000193799	lincRNA		12	1	115386846	1092
ENSMUSG00000027303	protein_coding	Ptpra	ENSMUST00000230886	retained_intron		2	1	130544533	892
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000218964	protein_coding		10	1	79682474	979
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000122327	protein_coding	principal3	7	-1	105400032	3521
ENSMUSG00000063316	protein_coding	Rpl27	ENSMUST00000152162	processed_transcript		11	1	101444874	548
ENSMUSG00000010047	protein_coding	Hyal2	ENSMUST00000192887	protein_coding		9	1	107567945	323
ENSMUSG00000102313	IG_V_gene	Ighv1-62-1	ENSMUST00000103503	IG_V_gene		12	-1	115387128	349
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000124745	protein_coding	principal1	8	1	71469199	1933
ENSMUSG00000045421	protein_coding	Olfr1390	ENSMUST00000215014	protein_coding	principal1	11	1	49335188	2875
ENSMUSG00000102313	IG_V_gene	Ighv1-62-1	ENSMUST00000171270	IG_V_gene	principal1	12	-1	115386988	90
ENSMUSG00000030513	protein_coding	Pcsk6	ENSMUST00000055576	protein_coding	principal3	7	1	65862029	4405
ENSMUSG00000045421	protein_coding	Olfr1390	ENSMUST00000062719	protein_coding	principal1	11	1	49340534	936
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000219074	processed_transcript		10	1	79682481	377
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000217689	retained_intron		10	1	79682526	370
ENSMUSG00000038855	protein_coding	Itpkb	ENSMUST00000070181	protein_coding	principal1	1	1	180330485	6235
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000218938	protein_coding		10	1	79684387	422
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000210448	nonsense_mediated_decay		7	-1	105384120	844
ENSMUSG00000030513	protein_coding	Pcsk6	ENSMUST00000098391	protein_coding	alternative2	7	1	65862136	4207
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000219389	protein_coding		10	1	79684759	380
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000185139	nonsense_mediated_decay		6	-1	119848099	6719
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000184864	protein_coding	alternative1	6	-1	119848059	5428
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000039541	protein_coding	principal3	2	1	121171215	4206
ENSMUSG00000038855	protein_coding	Itpkb	ENSMUST00000195043	retained_intron		1	1	180333866	4593
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000142559	retained_intron		7	-1	105381981	800
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000117786	protein_coding	principal3	15	-1	79441999	2694
ENSMUSG00000030513	protein_coding	Pcsk6	ENSMUST00000176209	protein_coding		7	1	65862432	3734
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000220328	protein_coding		10	1	79685003	408
ENSMUSG00000044783	protein_coding	Hjurp	ENSMUST00000054674	protein_coding	principal2	1	-1	88277633	4878
ENSMUSG00000060029	antisense	4930473A02Rik	ENSMUST00000136793	antisense		2	-1	130563749	1409
ENSMUSG00000028060	protein_coding	Khdc4	ENSMUST00000029696	protein_coding	principal1	3	1	88685803	2981
ENSMUSG00000027071	protein_coding	P2rx3	ENSMUST00000028465	protein_coding	principal2	2	-1	85035487	1812
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000210972	retained_intron		7	-1	105381631	425
ENSMUSG00000030513	protein_coding	Pcsk6	ENSMUST00000177369	retained_intron		7	1	65953012	583
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000183880	nonsense_mediated_decay		6	-1	119848115	4656
ENSMUSG00000060029	antisense	4930473A02Rik	ENSMUST00000079964	antisense		2	-1	130563749	1401
ENSMUSG00000030513	protein_coding	Pcsk6	ENSMUST00000177272	retained_intron		7	1	66038418	681
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000211013	processed_transcript		7	-1	105389514	785
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000184320	nonsense_mediated_decay		6	-1	119743444	1836
ENSMUSG00000020307	protein_coding	Cdc34	ENSMUST00000166603	protein_coding	principal1	10	1	79682304	1078
ENSMUSG00000027071	protein_coding	P2rx3	ENSMUST00000111616	protein_coding		2	-1	85035322	1315
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000127155	retained_intron		15	-1	79421315	741
ENSMUSG00000044783	protein_coding	Hjurp	ENSMUST00000065420	protein_coding	alternative2	1	-1	88277557	2217
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000136298	retained_intron		7	-1	105389111	623
ENSMUSG00000108793	protein_coding	Gm45213	ENSMUST00000206065	protein_coding	principal1	7	1	66043602	304
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000184838	nonsense_mediated_decay		6	-1	119848134	4230
ENSMUSG00000028060	protein_coding	Khdc4	ENSMUST00000200588	retained_intron		3	1	88685814	1793
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000183911	protein_coding	alternative1	6	-1	119848167	3865
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000185317	retained_intron		1	1	65186683	1044
ENSMUSG00000027071	protein_coding	P2rx3	ENSMUST00000145285	processed_transcript		2	-1	85033310	412
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000210341	processed_transcript		7	-1	105399986	471
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000185143	nonsense_mediated_decay		6	-1	119848089	2835
ENSMUSG00000093405	bidirectional_promoter_lncRNA	Gm20684	ENSMUST00000176744	bidirectional_promoter_lncRNA		7	-1	65861992	380
ENSMUSG00000044783	protein_coding	Hjurp	ENSMUST00000147393	protein_coding		1	-1	88277506	2030
ENSMUSG00000027071	protein_coding	P2rx3	ENSMUST00000127839	processed_transcript		2	-1	85033194	688
ENSMUSG00000026634	protein_coding	Angel2	ENSMUST00000027947	protein_coding	alternative1	1	1	190925112	3562
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000081713	protein_coding	alternative1	1	-1	13372439	8171
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000204666	retained_intron		6	-1	119622105	4839
ENSMUSG00000024734	protein_coding	Zp1	ENSMUST00000025641	protein_coding	principal1	19	-1	10920632	1963
ENSMUSG00000044783	protein_coding	Hjurp	ENSMUST00000127446	protein_coding		1	-1	88269392	382
ENSMUSG00000063600	protein_coding	Egfem1	ENSMUST00000119598	protein_coding	principal4	3	1	29082733	2687
ENSMUSG00000045609	processed_pseudogene	Gm5455	ENSMUST00000058710	processed_pseudogene		13	-1	110305491	715
ENSMUSG00000044783	protein_coding	Hjurp	ENSMUST00000128532	retained_intron		1	-1	88273119	566
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000110658	protein_coding	alternative1	2	1	121171168	4250
ENSMUSG00000026634	protein_coding	Angel2	ENSMUST00000137608	retained_intron		1	1	190928492	1585
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000183872	processed_transcript		6	-1	119796914	1622
ENSMUSG00000035478	protein_coding	Mbd3	ENSMUST00000092295	protein_coding	principal1	10	-1	80399550	1662
ENSMUSG00000063600	protein_coding	Egfem1	ENSMUST00000118531	protein_coding	alternative2	3	1	29082771	1779
ENSMUSG00000044783	protein_coding	Hjurp	ENSMUST00000148384	retained_intron		1	-1	88270947	782
ENSMUSG00000010047	protein_coding	Hyal2	ENSMUST00000195752	protein_coding	principal2	9	1	107567945	2062
ENSMUSG00000044783	protein_coding	Hjurp	ENSMUST00000126739	retained_intron		1	-1	88277579	2780
ENSMUSG00000063600	protein_coding	Egfem1	ENSMUST00000143483	processed_transcript		3	1	29457764	331
ENSMUSG00000028060	protein_coding	Khdc4	ENSMUST00000198042	nonsense_mediated_decay		3	1	88685827	2567
ENSMUSG00000110997	TEC	2610028D06Rik	ENSMUST00000215216	TEC		9	-1	45799060	1713
ENSMUSG00000063600	protein_coding	Egfem1	ENSMUST00000140288	protein_coding		3	1	29513906	733
ENSMUSG00000044465	protein_coding	Fam160a2	ENSMUST00000074686	protein_coding	alternative2	7	-1	105400011	3212
ENSMUSG00000028060	protein_coding	Khdc4	ENSMUST00000199684	nonsense_mediated_decay		3	1	88685827	3636
ENSMUSG00000010047	protein_coding	Hyal2	ENSMUST00000193747	protein_coding	alternative2	9	1	107569141	1532
ENSMUSG00000035478	protein_coding	Mbd3	ENSMUST00000105349	protein_coding		10	-1	80399550	1566
ENSMUSG00000010047	protein_coding	Hyal2	ENSMUST00000194794	protein_coding		9	1	107569395	544
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000079582	protein_coding		6	-1	119848102	2304
ENSMUSG00000078611	protein_coding	Gm5901	ENSMUST00000211523	processed_transcript		7	1	105375038	584
ENSMUSG00000010047	protein_coding	Hyal2	ENSMUST00000195681	protein_coding		9	1	107569805	2968
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000183741	retained_intron		6	-1	119826460	2476
ENSMUSG00000026634	protein_coding	Angel2	ENSMUST00000066632	protein_coding	principal3	1	1	190928492	3714
ENSMUSG00000074465	antisense	Gm10701	ENSMUST00000098926	antisense		9	1	24341657	906
ENSMUSG00000078611	protein_coding	Gm5901	ENSMUST00000106805	protein_coding	principal1	7	1	105375050	1140
ENSMUSG00000055660	protein_coding	Mettl4	ENSMUST00000234990	protein_coding	principal2	17	-1	94749892	6640
ENSMUSG00000010047	protein_coding	Hyal2	ENSMUST00000195667	retained_intron		9	1	107571210	518
ENSMUSG00000022808	protein_coding	Snx4	ENSMUST00000232228	retained_intron		16	1	33251442	643
ENSMUSG00000030172	protein_coding	Erc1	ENSMUST00000032279	protein_coding	principal2	6	-1	119825226	8356
ENSMUSG00000042197	protein_coding	Zfp451	ENSMUST00000019861	protein_coding		1	-1	33814527	3958
ENSMUSG00000035478	protein_coding	Mbd3	ENSMUST00000105348	protein_coding		10	-1	80399422	1222
ENSMUSG00000078611	protein_coding	Gm5901	ENSMUST00000209233	protein_coding		7	1	105377823	198
ENSMUSG00000055660	protein_coding	Mettl4	ENSMUST00000171284	protein_coding	alternative2	17	-1	94750019	2560
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000120859	protein_coding	principal3	15	-1	79442002	1391
ENSMUSG00000108282	antisense	Gm44317	ENSMUST00000204314	antisense		6	1	119570941	4214
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000006037	protein_coding	principal4	1	-1	13374083	4897
ENSMUSG00000026634	protein_coding	Angel2	ENSMUST00000123384	nonsense_mediated_decay		1	1	190928492	3261
ENSMUSG00000042197	protein_coding	Zfp451	ENSMUST00000115167	protein_coding		1	-1	33805389	674
ENSMUSG00000028060	protein_coding	Khdc4	ENSMUST00000200364	retained_intron		3	1	88685833	2388
ENSMUSG00000035478	protein_coding	Mbd3	ENSMUST00000105347	protein_coding		10	-1	80395719	914
ENSMUSG00000071858	protein_coding	Gm94	ENSMUST00000096570	protein_coding	principal2	18	-1	43792878	748
ENSMUSG00000010047	protein_coding	Hyal2	ENSMUST00000010191	protein_coding	principal2	9	1	107569117	1893
ENSMUSG00000046006	protein_coding	Gapt	ENSMUST00000058806	protein_coding	principal1	13	-1	110357187	2069
ENSMUSG00000115147	unprocessed_pseudogene	Gm5219	ENSMUST00000228785	unprocessed_pseudogene		15	1	9407188	1542
ENSMUSG00000055660	protein_coding	Mettl4	ENSMUST00000234593	retained_intron		17	-1	94749941	2224
ENSMUSG00000025130	protein_coding	P4hb	ENSMUST00000026122	protein_coding	principal1	11	-1	120573253	2861
ENSMUSG00000026634	protein_coding	Angel2	ENSMUST00000110899	protein_coding	alternative1	1	1	190928492	3673
ENSMUSG00000035478	protein_coding	Mbd3	ENSMUST00000125618	processed_transcript		10	-1	80395326	530
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000185275	processed_transcript		1	-1	13146630	1330
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000135052	processed_transcript		8	1	71469199	1929
ENSMUSG00000071858	protein_coding	Gm94	ENSMUST00000237926	protein_coding	alternative2	18	-1	43792867	326
ENSMUSG00000042197	protein_coding	Zfp451	ENSMUST00000151055	nonsense_mediated_decay		1	-1	33783937	704
ENSMUSG00000028060	protein_coding	Khdc4	ENSMUST00000198078	nonsense_mediated_decay		3	1	88685837	1922
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000146784	retained_intron		1	-1	13148507	557
ENSMUSG00000092567	unprocessed_pseudogene	Vmn2r-ps73	ENSMUST00000173890	unprocessed_pseudogene		7	1	85696356	2111
ENSMUSG00000042197	protein_coding	Zfp451	ENSMUST00000194656	protein_coding		1	-1	33814426	801
ENSMUSG00000046006	protein_coding	Gapt	ENSMUST00000224534	protein_coding	principal1	13	-1	110357199	2016
ENSMUSG00000085158	lincRNA	Gm14264	ENSMUST00000147141	lincRNA		2	-1	170662465	1864
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000133232	retained_intron		1	-1	13151018	594
ENSMUSG00000026634	protein_coding	Angel2	ENSMUST00000135364	protein_coding		1	1	190928822	668
ENSMUSG00000032564	protein_coding	Cpne4	ENSMUST00000057742	protein_coding	principal1	9	1	104569483	3959
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000122044	protein_coding	alternative2	15	-1	79441818	3174
ENSMUSG00000042197	protein_coding	Zfp451	ENSMUST00000130376	processed_transcript		1	-1	33814211	655
ENSMUSG00000107734	TEC	Gm30055	ENSMUST00000203175	TEC		6	1	136986596	803
ENSMUSG00000025130	protein_coding	P4hb	ENSMUST00000166620	processed_transcript		11	-1	120561236	414
ENSMUSG00000028060	protein_coding	Khdc4	ENSMUST00000197300	processed_transcript		3	1	88693441	757
ENSMUSG00000041359	protein_coding	Tcl1	ENSMUST00000041316	protein_coding	principal1	12	-1	105222737	1398
ENSMUSG00000042197	protein_coding	Zfp451	ENSMUST00000140163	processed_transcript		1	-1	33800767	712
ENSMUSG00000025130	protein_coding	P4hb	ENSMUST00000168360	protein_coding		11	-1	120572841	770
ENSMUSG00000028060	protein_coding	Khdc4	ENSMUST00000200438	retained_intron		3	1	88698839	684
ENSMUSG00000032564	protein_coding	Cpne4	ENSMUST00000077190	protein_coding		9	1	104569787	3409
ENSMUSG00000115748	processed_pseudogene	Gm49093	ENSMUST00000226566	processed_pseudogene		15	1	5280946	405
ENSMUSG00000026634	protein_coding	Angel2	ENSMUST00000144693	processed_transcript		1	1	190928846	3343
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000145740	retained_intron		15	-1	79424299	560
ENSMUSG00000032564	protein_coding	Cpne4	ENSMUST00000213120	protein_coding		9	1	104585338	1093
ENSMUSG00000010054	protein_coding	Tusc2	ENSMUST00000010198	protein_coding	principal1	9	1	107563255	1665
ENSMUSG00000028060	protein_coding	Khdc4	ENSMUST00000198721	retained_intron		3	1	88699640	727
ENSMUSG00000026634	protein_coding	Angel2	ENSMUST00000130298	nonsense_mediated_decay		1	1	190928851	663
ENSMUSG00000041359	protein_coding	Tcl1	ENSMUST00000101071	protein_coding		12	-1	105222716	1299
ENSMUSG00000114998	processed_pseudogene	Gm2157	ENSMUST00000228083	processed_pseudogene		15	-1	5302046	367
ENSMUSG00000032564	protein_coding	Cpne4	ENSMUST00000213452	protein_coding		9	1	104872679	555
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000156513	protein_coding		15	-1	79426444	1180
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000130098	processed_transcript		8	1	71469199	1881
ENSMUSG00000026634	protein_coding	Angel2	ENSMUST00000134187	retained_intron		1	1	190928853	1135
ENSMUSG00000114992	processed_pseudogene	Gm2150	ENSMUST00000227164	processed_pseudogene		15	-1	5315861	529
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000146677	processed_transcript		8	1	71470411	1956
ENSMUSG00000028060	protein_coding	Khdc4	ENSMUST00000200622	processed_transcript		3	1	88708780	571
ENSMUSG00000005447	protein_coding	Pafah1b3	ENSMUST00000140093	retained_intron		7	-1	25296702	833
ENSMUSG00000010054	protein_coding	Tusc2	ENSMUST00000193292	processed_transcript		9	1	107563351	302
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000136003	retained_intron		15	-1	79429867	689
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000138892	protein_coding		8	1	71469199	1738
ENSMUSG00000049436	protein_coding	Upk1b	ENSMUST00000057767	protein_coding	principal1	16	-1	38800328	1894
ENSMUSG00000042197	protein_coding	Zfp451	ENSMUST00000044455	protein_coding	principal1	1	-1	33814570	11876
ENSMUSG00000115116	processed_pseudogene	Gm46496	ENSMUST00000226389	processed_pseudogene		15	1	5464175	742
ENSMUSG00000026634	protein_coding	Angel2	ENSMUST00000146048	retained_intron		1	1	190937252	632
ENSMUSG00000105512	antisense	Gm43714	ENSMUST00000198351	antisense		3	-1	88686397	1204
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000147843	processed_transcript		8	1	71469199	410
ENSMUSG00000010054	protein_coding	Tusc2	ENSMUST00000193418	protein_coding		9	1	107563370	410
ENSMUSG00000040187	protein_coding	Arntl2	ENSMUST00000123444	processed_transcript		6	1	146796055	238
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000207812	protein_coding		19	1	26748189	756
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000230599	protein_coding		15	-1	79455566	654
ENSMUSG00000110488	TEC	Gm45724	ENSMUST00000213031	TEC		8	-1	105051468	420
ENSMUSG00000115402	processed_pseudogene	Gm49243	ENSMUST00000227091	processed_pseudogene		15	-1	65688148	321
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000127885	retained_intron		8	1	71469199	462
ENSMUSG00000041359	protein_coding	Tcl1	ENSMUST00000176579	protein_coding		12	-1	105222706	760
ENSMUSG00000049436	protein_coding	Upk1b	ENSMUST00000232536	retained_intron		16	-1	38780343	459
ENSMUSG00000042197	protein_coding	Zfp451	ENSMUST00000125723	retained_intron		1	-1	33814595	542
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000175791	protein_coding		19	1	26748251	946
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000150984	retained_intron		8	1	71469285	620
ENSMUSG00000051877	protein_coding	Vmn2r72	ENSMUST00000063425	protein_coding	principal1	7	-1	85755097	4531
ENSMUSG00000006215	protein_coding	Zbtb17	ENSMUST00000006377	protein_coding	principal1	4	1	141444654	2722
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000144790	protein_coding		15	-1	79439018	596
ENSMUSG00000078192	processed_pseudogene	Gm7290	ENSMUST00000104990	processed_pseudogene		7	-1	142757852	617
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000135519	protein_coding		15	-1	79441818	422
ENSMUSG00000051877	protein_coding	Vmn2r72	ENSMUST00000233546	nonsense_mediated_decay		7	-1	85755097	4550
ENSMUSG00000051877	protein_coding	Vmn2r72	ENSMUST00000233415	protein_coding		7	-1	85755097	4730
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000229510	protein_coding		15	-1	79433126	322
ENSMUSG00000085860	processed_transcript	2410003L11Rik	ENSMUST00000131687	processed_transcript		11	1	97598511	612
ENSMUSG00000041359	protein_coding	Tcl1	ENSMUST00000175652	protein_coding		12	-1	105222793	535
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000230942	protein_coding		15	-1	79442136	393
ENSMUSG00000112895	TEC	Gm47567	ENSMUST00000219320	TEC		12	1	98277517	3524
ENSMUSG00000085860	processed_transcript	2410003L11Rik	ENSMUST00000145262	processed_transcript		11	1	97614982	642
ENSMUSG00000078122	antisense	F630028O10Rik	ENSMUST00000133125	antisense		X	1	96239926	2771
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000098645	retained_intron		8	1	71469211	874
ENSMUSG00000022433	protein_coding	Csnk1e	ENSMUST00000156043	protein_coding		15	-1	79443919	566
ENSMUSG00000041359	protein_coding	Tcl1	ENSMUST00000177521	nonsense_mediated_decay		12	-1	105222696	761
ENSMUSG00000112510	antisense	Gm47566	ENSMUST00000218404	antisense		12	-1	98279661	708
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000139904	retained_intron		8	1	71469211	784
ENSMUSG00000059866	protein_coding	Tnip2	ENSMUST00000030991	protein_coding		5	-1	34513963	2022
ENSMUSG00000041359	protein_coding	Tcl1	ENSMUST00000176952	processed_transcript		12	-1	105222625	658
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000207118	protein_coding		19	1	26748399	834
ENSMUSG00000074247	protein_coding	Dda1	ENSMUST00000147642	protein_coding		8	1	71469205	1865
ENSMUSG00000032187	protein_coding	Smarca4	ENSMUST00000034707	protein_coding	principal3	9	1	21616169	6354
ENSMUSG00000043439	protein_coding	Epop	ENSMUST00000052281	protein_coding	principal1	11	-1	97629702	2314
ENSMUSG00000078122	antisense	F630028O10Rik	ENSMUST00000147681	antisense		X	1	96239966	3255
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000209085	protein_coding		19	1	26748402	1841
ENSMUSG00000059866	protein_coding	Tnip2	ENSMUST00000087737	protein_coding	principal1	5	-1	34513991	1987
ENSMUSG00000026578	protein_coding	Ccdc181	ENSMUST00000027867	protein_coding	principal1	1	1	164275585	1909
ENSMUSG00000022808	protein_coding	Snx4	ENSMUST00000231389	nonsense_mediated_decay		16	1	33251444	2457
ENSMUSG00000032187	protein_coding	Smarca4	ENSMUST00000174008	protein_coding	alternative1	9	1	21616264	5405
ENSMUSG00000059866	protein_coding	Tnip2	ENSMUST00000114359	protein_coding		5	-1	34513938	1642
ENSMUSG00000021886	protein_coding	Gpr65	ENSMUST00000075072	protein_coding	principal1	12	1	98268635	2069
ENSMUSG00000032187	protein_coding	Smarca4	ENSMUST00000172996	protein_coding		9	1	21635767	3800
ENSMUSG00000059866	protein_coding	Tnip2	ENSMUST00000143072	retained_intron		5	-1	34501618	383
ENSMUSG00000047050	protein_coding	Olfr914	ENSMUST00000217057	protein_coding	principal1	9	1	38605102	4948
ENSMUSG00000059866	protein_coding	Tnip2	ENSMUST00000137555	retained_intron		5	-1	34513849	900
ENSMUSG00000047050	protein_coding	Olfr914	ENSMUST00000057755	protein_coding	principal1	9	1	38606467	951
ENSMUSG00000059866	protein_coding	Tnip2	ENSMUST00000159102	retained_intron		5	-1	34513660	584
ENSMUSG00000039680	protein_coding	Mrps6	ENSMUST00000047429	protein_coding	principal1	16	1	92058270	846
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000147927	retained_intron		1	-1	13374083	3429
ENSMUSG00000084278	processed_pseudogene	Gm12189	ENSMUST00000119779	processed_pseudogene		11	1	49404620	912
ENSMUSG00000032187	protein_coding	Smarca4	ENSMUST00000098948	protein_coding	alternative1	9	1	21616169	6376
ENSMUSG00000039680	protein_coding	Mrps6	ENSMUST00000232222	processed_transcript		16	1	92058813	1115
ENSMUSG00000027560	protein_coding	Dok5	ENSMUST00000029075	protein_coding	principal1	2	1	170731807	1768
ENSMUSG00000020830	protein_coding	Vmo1	ENSMUST00000021179	protein_coding	principal1	11	-1	70514616	672
ENSMUSG00000039680	protein_coding	Mrps6	ENSMUST00000138961	processed_transcript		16	1	92106261	702
ENSMUSG00000092270	processed_pseudogene	Gm7031	ENSMUST00000173709	processed_pseudogene		17	1	37175854	919
ENSMUSG00000082345	processed_pseudogene	Gm13622	ENSMUST00000120658	processed_pseudogene		2	-1	69737789	433
ENSMUSG00000116930	protein_coding	Gm49711	ENSMUST00000232677	protein_coding	principal1	16	1	92058316	1268
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000143603	retained_intron		1	-1	13374029	3804
ENSMUSG00000030604	protein_coding	Zfp626	ENSMUST00000205671	protein_coding	principal1	7	1	27807196	5329
ENSMUSG00000081690	processed_pseudogene	Gm12317	ENSMUST00000122307	processed_pseudogene		11	-1	70518043	319
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000139970	retained_intron		1	-1	13372429	2944
ENSMUSG00000030604	protein_coding	Zfp626	ENSMUST00000080175	protein_coding		7	1	27810813	816
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000124088	retained_intron		1	-1	13374029	2836
ENSMUSG00000090556	polymorphic_pseudogene	Olfr753-ps1	ENSMUST00000208970	polymorphic_pseudogene	principal5	17	-1	37182618	2764
ENSMUSG00000006215	protein_coding	Zbtb17	ENSMUST00000142438	processed_transcript		4	1	141444684	3478
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000153772	processed_transcript		2	1	69722545	693
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000145280	protein_coding		1	-1	13299722	423
ENSMUSG00000090556	polymorphic_pseudogene	Olfr753-ps1	ENSMUST00000219487	polymorphic_pseudogene	principal5	17	-1	37182618	2956
ENSMUSG00000090556	polymorphic_pseudogene	Olfr753-ps1	ENSMUST00000174025	polymorphic_pseudogene	principal5	17	-1	37185730	3121
ENSMUSG00000006215	protein_coding	Zbtb17	ENSMUST00000142020	processed_transcript		4	1	141444699	2973
ENSMUSG00000090556	polymorphic_pseudogene	Olfr753-ps1	ENSMUST00000174673	protein_coding	alternative2	17	-1	37170645	919
ENSMUSG00000005886	protein_coding	Ncoa2	ENSMUST00000068304	protein_coding	alternative1	1	-1	13374083	8006
ENSMUSG00000022324	protein_coding	Matn2	ENSMUST00000227119	processed_transcript		15	1	34306677	395
ENSMUSG00000006215	protein_coding	Zbtb17	ENSMUST00000144899	processed_transcript		4	1	141444706	338
ENSMUSG00000006728	protein_coding	Cdk4	ENSMUST00000006911	protein_coding	principal1	10	1	127063534	2053
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000190058	nonsense_mediated_decay		1	1	65186689	3277
ENSMUSG00000026121	protein_coding	Sema4c	ENSMUST00000191677	protein_coding	principal1	1	-1	36558349	3779
ENSMUSG00000006215	protein_coding	Zbtb17	ENSMUST00000142695	processed_transcript		4	1	141463383	785
ENSMUSG00000117642	processed_pseudogene	Amd-ps7	ENSMUST00000234672	processed_pseudogene		17	1	94803193	626
ENSMUSG00000006728	protein_coding	Cdk4	ENSMUST00000120226	protein_coding		10	1	127063603	714
ENSMUSG00000044206	protein_coding	Vsig4	ENSMUST00000050707	protein_coding	principal1	X	-1	96293438	1432
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000188799	retained_intron		1	1	65186693	4083
ENSMUSG00000098121	processed_pseudogene	Gm27038	ENSMUST00000182794	processed_pseudogene		17	-1	94756872	175
ENSMUSG00000103085	TEC	Gm38120	ENSMUST00000195506	TEC		1	-1	13348204	4642
ENSMUSG00000005447	protein_coding	Pafah1b3	ENSMUST00000108410	protein_coding		7	-1	25297312	689
ENSMUSG00000006215	protein_coding	Zbtb17	ENSMUST00000123477	processed_transcript		4	1	141464818	771
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000187579	retained_intron		1	1	65186694	2250
ENSMUSG00000117499	TEC	Gm50010	ENSMUST00000234240	TEC		17	-1	94816063	1323
ENSMUSG00000059588	protein_coding	Calcrl	ENSMUST00000074262	protein_coding	principal1	2	-1	84425411	4882
ENSMUSG00000002052	protein_coding	Supt6	ENSMUST00000002121	protein_coding	principal1	11	-1	78245987	6488
ENSMUSG00000089774	protein_coding	Slc5a3	ENSMUST00000113975	protein_coding	principal1	16	1	92058322	10913
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000189925	processed_transcript		1	1	65186696	1303
ENSMUSG00000006215	protein_coding	Zbtb17	ENSMUST00000130482	processed_transcript		4	1	141465415	867
ENSMUSG00000103495	TEC	Gm37409	ENSMUST00000195811	TEC		1	-1	13236434	1626
ENSMUSG00000022808	protein_coding	Snx4	ENSMUST00000023502	protein_coding	principal1	16	1	33251444	3161
ENSMUSG00000117653	TEC	Gm50009	ENSMUST00000234275	TEC		17	-1	94812922	1312
ENSMUSG00000006728	protein_coding	Cdk4	ENSMUST00000133115	protein_coding		10	1	127063604	950
ENSMUSG00000094701	protein_coding	Olfr916	ENSMUST00000214093	protein_coding	principal1	9	-1	38659875	3685
ENSMUSG00000035171	protein_coding	1110059E24Rik	ENSMUST00000177577	protein_coding		19	-1	21652728	599
ENSMUSG00000044206	protein_coding	Vsig4	ENSMUST00000146830	processed_transcript		X	-1	96293412	410
ENSMUSG00000059588	protein_coding	Calcrl	ENSMUST00000151295	processed_transcript		2	-1	84425266	500
ENSMUSG00000089774	protein_coding	Slc5a3	ENSMUST00000131098	processed_transcript		16	1	92078062	521
ENSMUSG00000094701	protein_coding	Olfr916	ENSMUST00000213714	protein_coding	principal1	9	-1	38659866	1380
ENSMUSG00000022808	protein_coding	Snx4	ENSMUST00000231242	retained_intron		16	1	33267758	600
ENSMUSG00000116747	lincRNA	Gm41496	ENSMUST00000231220	lincRNA		16	1	92126288	624
ENSMUSG00000059588	protein_coding	Calcrl	ENSMUST00000099944	protein_coding	principal1	2	-1	84375358	3973
ENSMUSG00000094701	protein_coding	Olfr916	ENSMUST00000081196	protein_coding	principal1	9	-1	38658390	933
ENSMUSG00000026121	protein_coding	Sema4c	ENSMUST00000191642	protein_coding	principal1	1	-1	36557526	3892
ENSMUSG00000114580	processed_pseudogene	Gm48782	ENSMUST00000225519	processed_pseudogene		14	-1	19061823	989
ENSMUSG00000116608	lincRNA	Gm41495	ENSMUST00000232211	lincRNA		16	1	92154247	720
ENSMUSG00000006728	protein_coding	Cdk4	ENSMUST00000142558	nonsense_mediated_decay		10	1	127063609	924
ENSMUSG00000043067	protein_coding	Dpy19l1	ENSMUST00000115277	protein_coding		9	-1	24487914	4747
ENSMUSG00000057444	polymorphic_pseudogene	Olfr915	ENSMUST00000215191	polymorphic_pseudogene	principal1	9	-1	38647522	933
ENSMUSG00000115850	lincRNA	Gm48956	ENSMUST00000226289	lincRNA		15	-1	25445640	223
ENSMUSG00000104373	IG_V_pseudogene	Gm37511	ENSMUST00000192901	IG_V_pseudogene		12	-1	115404724	294
ENSMUSG00000026121	protein_coding	Sema4c	ENSMUST00000195620	protein_coding	principal1	1	-1	36557557	3640
ENSMUSG00000086331	sense_intronic	Gm16310	ENSMUST00000124376	sense_intronic		16	1	92094568	960
ENSMUSG00000103470	IG_V_pseudogene	Gm38184	ENSMUST00000195757	IG_V_pseudogene		12	-1	115413123	113
ENSMUSG00000115729	processed_transcript	Gm48957	ENSMUST00000227204	lincRNA		15	1	25415022	338
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208915	nonsense_mediated_decay		19	1	26748403	1914
ENSMUSG00000111700	polymorphic_pseudogene	Gm49385	ENSMUST00000215291	polymorphic_pseudogene	principal1	9	-1	38658393	572
ENSMUSG00000115729	processed_transcript	Gm48957	ENSMUST00000226957	lincRNA		15	1	25415051	653
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208541	nonsense_mediated_decay		19	1	26748406	1122
ENSMUSG00000027965	protein_coding	Olfm3	ENSMUST00000081752	protein_coding	alternative1	3	1	114904078	4647
ENSMUSG00000096078	IG_V_gene	Ighv1-62-2	ENSMUST00000194581	IG_V_gene		12	-1	115446869	378
ENSMUSG00000115729	processed_transcript	Gm48957	ENSMUST00000228425	lincRNA		15	1	25415058	2016
ENSMUSG00000083121	processed_pseudogene	Gm6341	ENSMUST00000119683	processed_pseudogene		7	-1	101155055	411
ENSMUSG00000002052	protein_coding	Supt6	ENSMUST00000108314	retained_intron		11	-1	78223686	3856
ENSMUSG00000115729	processed_transcript	Gm48957	ENSMUST00000226401	lincRNA		15	1	25415063	694
ENSMUSG00000115729	processed_transcript	Gm48957	ENSMUST00000228099	retained_intron		15	1	25458489	2495
ENSMUSG00000096078	IG_V_gene	Ighv1-62-2	ENSMUST00000163467	IG_V_gene	principal1	12	-1	115446710	302
ENSMUSG00000035078	protein_coding	Mtmr9	ENSMUST00000225449	protein_coding		14	-1	63528159	1467
ENSMUSG00000027965	protein_coding	Olfm3	ENSMUST00000149158	protein_coding		3	1	114904635	674
ENSMUSG00000056089	lincRNA	Gm5468	ENSMUST00000227851	lincRNA		15	1	25414192	682
ENSMUSG00000056089	lincRNA	Gm5468	ENSMUST00000069992	lincRNA		15	1	25414192	653
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000207054	protein_coding		19	1	26748406	2333
ENSMUSG00000043067	protein_coding	Dpy19l1	ENSMUST00000142064	protein_coding	principal1	9	-1	24503140	3489
ENSMUSG00000034863	protein_coding	Ano8	ENSMUST00000093450	protein_coding	principal2	8	-1	71485963	3653
ENSMUSG00000098090	transcribed_unprocessed_pseudogene	2700099C18Rik	ENSMUST00000182402	processed_transcript		17	1	94750100	1275
ENSMUSG00000034863	protein_coding	Ano8	ENSMUST00000213382	protein_coding	alternative2	8	-1	71485963	3785
ENSMUSG00000096767	IG_V_gene	Ighv1-62-3	ENSMUST00000103532	IG_V_gene	principal1	12	-1	115461485	405
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208589	protein_coding		19	1	26748408	1054
ENSMUSG00000098090	transcribed_unprocessed_pseudogene	2700099C18Rik	ENSMUST00000182313	processed_transcript		17	1	94750112	799
ENSMUSG00000098132	protein_coding	Rassf10	ENSMUST00000182858	protein_coding	principal1	7	1	112953962	3496
ENSMUSG00000084930	antisense	Gm11706	ENSMUST00000151282	antisense		11	-1	106816008	316
ENSMUSG00000098090	transcribed_unprocessed_pseudogene	2700099C18Rik	ENSMUST00000182475	processed_transcript		17	1	94750138	969
ENSMUSG00000026121	protein_coding	Sema4c	ENSMUST00000114991	protein_coding	principal1	1	-1	36558349	3773
ENSMUSG00000027965	protein_coding	Olfm3	ENSMUST00000051309	protein_coding	principal4	3	1	115080965	3928
ENSMUSG00000027355	protein_coding	Tmco5	ENSMUST00000028834	protein_coding	principal1	2	1	116878708	1164
ENSMUSG00000008813	protein_coding	Tppp2	ENSMUST00000008957	protein_coding	principal1	14	1	51918425	742
ENSMUSG00000006728	protein_coding	Cdk4	ENSMUST00000140254	retained_intron		10	1	127063614	2038
ENSMUSG00000098090	transcribed_unprocessed_pseudogene	2700099C18Rik	ENSMUST00000183133	transcribed_unprocessed_pseudogene		17	1	94752495	1344
ENSMUSG00000043067	protein_coding	Dpy19l1	ENSMUST00000152480	retained_intron		9	-1	24423959	3546
ENSMUSG00000006728	protein_coding	Cdk4	ENSMUST00000135179	retained_intron		10	1	127063616	574
ENSMUSG00000110109	processed_pseudogene	Gm5599	ENSMUST00000209602	processed_pseudogene		7	-1	112972883	788
ENSMUSG00000026121	protein_coding	Sema4c	ENSMUST00000191785	retained_intron		1	-1	36552894	745
ENSMUSG00000027355	protein_coding	Tmco5	ENSMUST00000155470	protein_coding		2	1	116878694	761
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000176475	protein_coding		19	1	26748411	983
ENSMUSG00000035171	protein_coding	1110059E24Rik	ENSMUST00000038830	protein_coding	principal2	19	-1	21652976	1614
ENSMUSG00000043067	protein_coding	Dpy19l1	ENSMUST00000149001	retained_intron		9	-1	24426418	651
ENSMUSG00000005447	protein_coding	Pafah1b3	ENSMUST00000005583	protein_coding	principal1	7	-1	25297986	901
ENSMUSG00000026121	protein_coding	Sema4c	ENSMUST00000195160	retained_intron		1	-1	36554230	618
ENSMUSG00000008813	protein_coding	Tppp2	ENSMUST00000177625	protein_coding	principal1	14	1	51918761	627
ENSMUSG00000066057	processed_transcript	Gm1976	ENSMUST00000234189	lincRNA		17	-1	94834798	1909
ENSMUSG00000006728	protein_coding	Cdk4	ENSMUST00000125682	protein_coding		10	1	127063868	1182
ENSMUSG00000027355	protein_coding	Tmco5	ENSMUST00000146144	processed_transcript		2	1	116888207	528
ENSMUSG00000066057	processed_transcript	Gm1976	ENSMUST00000182639	lincRNA		17	-1	94834799	1853
ENSMUSG00000043067	protein_coding	Dpy19l1	ENSMUST00000129048	processed_transcript		9	-1	24497172	472
ENSMUSG00000066057	processed_transcript	Gm1976	ENSMUST00000234446	retained_intron		17	-1	94834798	1741
ENSMUSG00000110207	lincRNA	Gm33586	ENSMUST00000210768	lincRNA		7	1	112983903	892
ENSMUSG00000022324	protein_coding	Matn2	ENSMUST00000226766	protein_coding		15	1	34306680	3252
ENSMUSG00000043067	protein_coding	Dpy19l1	ENSMUST00000170356	protein_coding	principal1	9	-1	24503140	4715
ENSMUSG00000066057	processed_transcript	Gm1976	ENSMUST00000084298	processed_transcript		17	-1	94764541	387
ENSMUSG00000034863	protein_coding	Ano8	ENSMUST00000212768	retained_intron		8	-1	71483738	4927
ENSMUSG00000027355	protein_coding	Tmco5	ENSMUST00000123598	protein_coding		2	1	116878691	838
ENSMUSG00000006728	protein_coding	Cdk4	ENSMUST00000123456	retained_intron		10	1	127064298	752
ENSMUSG00000117337	lincRNA	Gm49964	ENSMUST00000233693	lincRNA		17	-1	12320728	392
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000176698	protein_coding		19	1	26748423	955
ENSMUSG00000005447	protein_coding	Pafah1b3	ENSMUST00000148150	protein_coding		7	-1	25297882	859
ENSMUSG00000026121	protein_coding	Sema4c	ENSMUST00000193382	protein_coding		1	-1	36557534	452
ENSMUSG00000006728	protein_coding	Cdk4	ENSMUST00000145670	retained_intron		10	1	127066076	468
ENSMUSG00000068392	protein_coding	Rnase13	ENSMUST00000089771	protein_coding	principal1	14	-1	51922773	1412
ENSMUSG00000010067	protein_coding	Rassf1	ENSMUST00000093786	protein_coding	principal1	9	1	107551555	1787
ENSMUSG00000034863	protein_coding	Ano8	ENSMUST00000213016	retained_intron		8	-1	71484049	2491
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000207832	protein_coding		19	1	26748425	712
ENSMUSG00000026121	protein_coding	Sema4c	ENSMUST00000195339	protein_coding		1	-1	36558250	508
ENSMUSG00000097350	bidirectional_promoter_lncRNA	4732491K20Rik	ENSMUST00000181774	bidirectional_promoter_lncRNA		17	1	12318853	3174
ENSMUSG00000005447	protein_coding	Pafah1b3	ENSMUST00000155118	protein_coding		7	-1	25297937	679
ENSMUSG00000010067	protein_coding	Rassf1	ENSMUST00000125080	retained_intron		9	1	107551562	658
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000177252	protein_coding		19	1	26748427	709
ENSMUSG00000115698	lincRNA	Gm49076	ENSMUST00000227552	lincRNA		14	-1	51929660	514
ENSMUSG00000035078	protein_coding	Mtmr9	ENSMUST00000058679	protein_coding	principal1	14	-1	63543982	2570
ENSMUSG00000111406	processed_pseudogene	Gm47449	ENSMUST00000217596	processed_pseudogene		9	-1	38663236	420
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208712	protein_coding		19	1	26748443	630
ENSMUSG00000035171	protein_coding	1110059E24Rik	ENSMUST00000179553	nonsense_mediated_decay		19	-1	21652800	942
ENSMUSG00000005447	protein_coding	Pafah1b3	ENSMUST00000148828	retained_intron		7	-1	25297921	1106
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208186	protein_coding		19	1	26748443	740
ENSMUSG00000030142	protein_coding	Clec4e	ENSMUST00000032239	protein_coding	principal2	6	-1	123289870	2518
ENSMUSG00000005447	protein_coding	Pafah1b3	ENSMUST00000149634	processed_transcript		7	-1	25297934	368
ENSMUSG00000035171	protein_coding	1110059E24Rik	ENSMUST00000178012	nonsense_mediated_decay		19	-1	21630768	538
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208806	protein_coding		19	1	26748514	640
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208027	protein_coding		19	1	26748532	898
ENSMUSG00000117902	lincRNA	Gm41715	ENSMUST00000237459	lincRNA		18	1	43840096	663
ENSMUSG00000006736	protein_coding	Tspan31	ENSMUST00000060991	protein_coding	principal1	10	-1	127070264	1556
ENSMUSG00000010067	protein_coding	Rassf1	ENSMUST00000122225	protein_coding		9	1	107551567	1783
ENSMUSG00000118043	TEC	Gm50206	ENSMUST00000237193	TEC		18	1	43871335	2777
ENSMUSG00000035186	protein_coding	Ubd	ENSMUST00000038844	protein_coding	principal1	17	1	37193892	931
ENSMUSG00000033122	protein_coding	Hsd17b3	ENSMUST00000222783	protein_coding	principal1	13	-1	64089230	1184
ENSMUSG00000030142	protein_coding	Clec4e	ENSMUST00000176443	retained_intron		6	-1	123289869	4804
ENSMUSG00000112669	antisense	Gm48689	ENSMUST00000218201	antisense		10	-1	94787161	450
ENSMUSG00000087652	antisense	Gm15918	ENSMUST00000137259	antisense		14	-1	63607372	689
ENSMUSG00000006736	protein_coding	Tspan31	ENSMUST00000218488	retained_intron		10	-1	127069400	706
ENSMUSG00000035171	protein_coding	1110059E24Rik	ENSMUST00000179768	protein_coding	alternative2	19	-1	21652917	962
ENSMUSG00000118006	lincRNA	Gm50207	ENSMUST00000236394	lincRNA		18	1	43882744	933
ENSMUSG00000033122	protein_coding	Hsd17b3	ENSMUST00000221513	protein_coding		13	-1	64063133	655
ENSMUSG00000035171	protein_coding	1110059E24Rik	ENSMUST00000178523	protein_coding		19	-1	21652917	629
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000175842	protein_coding		19	1	26749711	779
ENSMUSG00000006736	protein_coding	Tspan31	ENSMUST00000218603	processed_transcript		10	-1	127069981	425
ENSMUSG00000035171	protein_coding	1110059E24Rik	ENSMUST00000177605	processed_transcript		19	-1	21604319	86
ENSMUSG00000006736	protein_coding	Tspan31	ENSMUST00000220344	retained_intron		10	-1	127070261	453
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208226	nonsense_mediated_decay		19	1	26749822	757
ENSMUSG00000026656	protein_coding	Fcgr2b	ENSMUST00000027966	protein_coding	principal4	1	-1	170976127	3544
ENSMUSG00000033122	protein_coding	Hsd17b3	ENSMUST00000222810	protein_coding		13	-1	64089201	653
ENSMUSG00000006736	protein_coding	Tspan31	ENSMUST00000217875	processed_transcript		10	-1	127070256	329
ENSMUSG00000030142	protein_coding	Clec4e	ENSMUST00000175995	retained_intron		6	-1	123289870	2234
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000207380	processed_transcript		19	1	26750289	613
ENSMUSG00000030142	protein_coding	Clec4e	ENSMUST00000176831	retained_intron		6	-1	123289870	4014
ENSMUSG00000030142	protein_coding	Clec4e	ENSMUST00000177367	protein_coding	alternative2	6	-1	123289870	729
ENSMUSG00000024732	protein_coding	Ccdc86	ENSMUST00000133836	processed_transcript		19	-1	10947332	2378
ENSMUSG00000035171	protein_coding	1110059E24Rik	ENSMUST00000180304	nonsense_mediated_decay		19	-1	21652610	541
ENSMUSG00000033122	protein_coding	Hsd17b3	ENSMUST00000039832	protein_coding	principal1	13	-1	64089186	1131
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208091	protein_coding		19	1	26750318	1140
ENSMUSG00000030142	protein_coding	Clec4e	ENSMUST00000176096	nonsense_mediated_decay		6	-1	123289866	370
ENSMUSG00000030142	protein_coding	Clec4e	ENSMUST00000175954	processed_transcript		6	-1	123289870	431
ENSMUSG00000033122	protein_coding	Hsd17b3	ENSMUST00000166224	protein_coding	principal1	13	-1	64089201	1286
ENSMUSG00000035067	protein_coding	Xkr6	ENSMUST00000119973	protein_coding	principal1	14	1	63606503	2963
ENSMUSG00000092426	processed_pseudogene	Gm18779	ENSMUST00000173444	processed_pseudogene		7	-1	85785595	577
ENSMUSG00000035171	protein_coding	1110059E24Rik	ENSMUST00000178781	retained_intron		19	-1	21652793	368
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000175953	protein_coding		19	1	26750939	692
ENSMUSG00000092410	unprocessed_pseudogene	Gm18354	ENSMUST00000173515	unprocessed_pseudogene		7	-1	85789648	1068
ENSMUSG00000010067	protein_coding	Rassf1	ENSMUST00000156198	nonsense_mediated_decay		9	1	107551590	1641
ENSMUSG00000025024	protein_coding	Smndc1	ENSMUST00000235830	nonsense_mediated_decay		19	-1	53389422	1992
ENSMUSG00000070501	protein_coding	Ifi214	ENSMUST00000139092	protein_coding	principal1	1	-1	173535957	2888
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000207535	nonsense_mediated_decay		19	1	26751936	503
ENSMUSG00000026656	protein_coding	Fcgr2b	ENSMUST00000081103	protein_coding	alternative2	1	-1	170976127	1462
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000177116	processed_transcript		19	1	26753600	968
ENSMUSG00000107573	protein_coding	Olfr1389	ENSMUST00000216641	protein_coding	principal1	11	1	49423067	3707
ENSMUSG00000107573	protein_coding	Olfr1389	ENSMUST00000217595	protein_coding	principal1	11	1	49423135	3549
ENSMUSG00000024732	protein_coding	Ccdc86	ENSMUST00000025639	protein_coding	principal1	19	-1	10949266	3003
ENSMUSG00000035067	protein_coding	Xkr6	ENSMUST00000176510	nonsense_mediated_decay		14	1	63606675	4315
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000177484	processed_transcript		19	1	26770491	736
ENSMUSG00000010067	protein_coding	Rassf1	ENSMUST00000010211	protein_coding		9	1	107554583	1727
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000208984	retained_intron		19	1	26771596	1924
ENSMUSG00000070501	protein_coding	Ifi214	ENSMUST00000090406	nonsense_mediated_decay		1	-1	173535957	1895
ENSMUSG00000035067	protein_coding	Xkr6	ENSMUST00000177500	nonsense_mediated_decay		14	1	63607026	694
ENSMUSG00000026656	protein_coding	Fcgr2b	ENSMUST00000161503	processed_transcript		1	-1	170961630	802
ENSMUSG00000024732	protein_coding	Ccdc86	ENSMUST00000189018	retained_intron		19	-1	10949251	3745
ENSMUSG00000024921	protein_coding	Smarca2	ENSMUST00000112637	protein_coding		19	1	26748403	1962
ENSMUSG00000107573	protein_coding	Olfr1389	ENSMUST00000203369	protein_coding	principal1	11	1	49430427	1073
ENSMUSG00000070501	protein_coding	Ifi214	ENSMUST00000097463	nonsense_mediated_decay		1	-1	173535802	1592
ENSMUSG00000010067	protein_coding	Rassf1	ENSMUST00000191832	processed_transcript		9	1	107555376	479
ENSMUSG00000035067	protein_coding	Xkr6	ENSMUST00000176862	processed_transcript		14	1	63659157	796
ENSMUSG00000070501	protein_coding	Ifi214	ENSMUST00000195022	retained_intron		1	-1	173535941	4780
ENSMUSG00000010067	protein_coding	Rassf1	ENSMUST00000121635	processed_transcript		9	1	107556611	1525
ENSMUSG00000085290	processed_pseudogene	Gm16129	ENSMUST00000152628	processed_pseudogene		3	1	63843116	486
ENSMUSG00000093772	antisense	4931403E22Rik	ENSMUST00000177048	antisense		19	-1	26823907	668
ENSMUSG00000010067	protein_coding	Rassf1	ENSMUST00000144129	retained_intron		9	1	107556743	2094
ENSMUSG00000059326	protein_coding	Csf2ra	ENSMUST00000235172	retained_intron		19	-1	61226683	2277
ENSMUSG00000075610	protein_coding	Tmem92	ENSMUST00000100554	protein_coding		11	-1	94782703	2043
ENSMUSG00000106510	processed_pseudogene	Gm18429	ENSMUST00000198707	processed_pseudogene		3	-1	115172049	421
ENSMUSG00000035067	protein_coding	Xkr6	ENSMUST00000120820	protein_coding		14	1	63795019	1702
ENSMUSG00000026656	protein_coding	Fcgr2b	ENSMUST00000159969	protein_coding	principal4	1	-1	170976547	1578
ENSMUSG00000010067	protein_coding	Rassf1	ENSMUST00000125386	retained_intron		9	1	107557935	808
ENSMUSG00000021831	protein_coding	Ero1l	ENSMUST00000022378	protein_coding	principal1	14	-1	45318572	4418
ENSMUSG00000026656	protein_coding	Fcgr2b	ENSMUST00000159688	protein_coding	alternative2	1	-1	170976127	1084
ENSMUSG00000010067	protein_coding	Rassf1	ENSMUST00000129320	retained_intron		9	1	107557942	2375
ENSMUSG00000078779	protein_coding	Zfp59	ENSMUST00000205701	protein_coding	principal1	7	1	27838607	3437
ENSMUSG00000034117	protein_coding	Ptgdr2	ENSMUST00000037261	protein_coding	principal1	19	1	10937160	2644
ENSMUSG00000078779	protein_coding	Zfp59	ENSMUST00000108331	protein_coding	principal1	7	1	27842855	1962
ENSMUSG00000021831	protein_coding	Ero1l	ENSMUST00000227147	protein_coding		14	-1	45299065	686
ENSMUSG00000040187	protein_coding	Arntl2	ENSMUST00000111639	protein_coding	principal3	6	1	146796065	2923
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000138601	retained_intron		2	1	121171209	2915
ENSMUSG00000103358	TEC	Gm37593	ENSMUST00000191669	TEC		17	1	51842861	3254
ENSMUSG00000037474	protein_coding	Dtl	ENSMUST00000195650	nonsense_mediated_decay		1	-1	191575521	4230
ENSMUSG00000105829	processed_pseudogene	Gm43669	ENSMUST00000198229	processed_pseudogene		3	1	115518576	436
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000144076	retained_intron		2	1	121171240	2887
ENSMUSG00000047702	protein_coding	Olfr1388	ENSMUST00000215226	protein_coding	principal1	11	1	49436624	3034
ENSMUSG00000025024	protein_coding	Smndc1	ENSMUST00000025997	protein_coding	principal1	19	-1	53390578	1948
ENSMUSG00000075610	protein_coding	Tmem92	ENSMUST00000143620	nonsense_mediated_decay		11	-1	94782500	1381
ENSMUSG00000026656	protein_coding	Fcgr2b	ENSMUST00000160106	retained_intron		1	-1	170976127	2250
ENSMUSG00000102600	TEC	Gm37266	ENSMUST00000193802	TEC		17	1	51850239	2287
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000154633	retained_intron		2	1	121171582	3174
ENSMUSG00000021831	protein_coding	Ero1l	ENSMUST00000228564	processed_transcript		14	-1	45305301	489
ENSMUSG00000026656	protein_coding	Fcgr2b	ENSMUST00000161730	retained_intron		1	-1	170976127	462
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000110657	protein_coding		2	1	121171268	1992
ENSMUSG00000047702	protein_coding	Olfr1388	ENSMUST00000055584	protein_coding	principal1	11	1	49443853	936
ENSMUSG00000021831	protein_coding	Ero1l	ENSMUST00000228836	retained_intron		14	-1	45301739	598
ENSMUSG00000103378	TEC	Gm37176	ENSMUST00000193300	TEC		17	1	51859167	4051
ENSMUSG00000087703	antisense	Gm15650	ENSMUST00000135451	antisense		5	1	35722555	770
ENSMUSG00000025024	protein_coding	Smndc1	ENSMUST00000236962	nonsense_mediated_decay		19	-1	53390574	1478
ENSMUSG00000025024	protein_coding	Smndc1	ENSMUST00000237529	protein_coding	principal1	19	-1	53390041	1480
ENSMUSG00000112746	processed_pseudogene	Gm19309	ENSMUST00000218295	processed_pseudogene		12	-1	51840621	205
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000143305	retained_intron		2	1	121187359	2062
ENSMUSG00000021831	protein_coding	Ero1l	ENSMUST00000227315	nonsense_mediated_decay		14	-1	45318771	326
ENSMUSG00000117175	lincRNA	Gm20098	ENSMUST00000233779	lincRNA		17	1	51882727	3293
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000144123	processed_transcript		2	1	121170654	799
ENSMUSG00000021831	protein_coding	Ero1l	ENSMUST00000228777	processed_transcript		14	-1	45307251	482
ENSMUSG00000075610	protein_coding	Tmem92	ENSMUST00000162809	protein_coding	principal1	11	-1	94782500	1437
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000208439	protein_coding		7	1	101092863	588
ENSMUSG00000025024	protein_coding	Smndc1	ENSMUST00000236245	protein_coding		19	-1	53390289	393
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000133773	processed_transcript		2	1	121171293	853
ENSMUSG00000103676	antisense	Gm38204	ENSMUST00000194835	antisense		1	1	170973373	619
ENSMUSG00000106149	TEC	Gm43430	ENSMUST00000196513	TEC		3	-1	135654566	3897
ENSMUSG00000040187	protein_coding	Arntl2	ENSMUST00000111636	protein_coding	alternative2	6	1	146805530	1713
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000135555	processed_transcript		2	1	121173651	641
ENSMUSG00000063386	protein_coding	Olfr1387	ENSMUST00000214541	protein_coding	principal1	11	1	49455343	4840
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000215961	protein_coding		9	-1	57435024	705
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000130929	processed_transcript		2	1	121171246	626
ENSMUSG00000114636	processed_pseudogene	Gm18275	ENSMUST00000224364	processed_pseudogene		14	1	19102467	1667
ENSMUSG00000063386	protein_coding	Olfr1387	ENSMUST00000073824	protein_coding	principal1	11	1	49459681	936
ENSMUSG00000114445	processed_pseudogene	Gm7089	ENSMUST00000225256	processed_pseudogene		14	-1	19108900	1466
ENSMUSG00000110277	protein_coding	Gm45871	ENSMUST00000211710	protein_coding	principal1	18	1	90579777	2003
ENSMUSG00000085063	antisense	Gm16024	ENSMUST00000128841	antisense		4	1	155616409	171
ENSMUSG00000110277	protein_coding	Gm45871	ENSMUST00000209969	protein_coding		18	1	90579796	1929
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000143320	retained_intron		2	1	121183613	548
ENSMUSG00000114819	processed_pseudogene	Gm48785	ENSMUST00000224448	processed_pseudogene		14	-1	19116924	496
ENSMUSG00000110277	protein_coding	Gm45871	ENSMUST00000209821	retained_intron		18	1	90579825	513
ENSMUSG00000110277	protein_coding	Gm45871	ENSMUST00000210766	processed_transcript		18	1	90585407	578
ENSMUSG00000040187	protein_coding	Arntl2	ENSMUST00000129788	nonsense_mediated_decay		6	1	146805530	1664
ENSMUSG00000097318	bidirectional_promoter_lncRNA	1700007L15Rik	ENSMUST00000231849	bidirectional_promoter_lncRNA		16	-1	33380675	665
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000126817	retained_intron		2	1	121188102	972
ENSMUSG00000045092	protein_coding	S1pr1	ENSMUST00000055676	protein_coding	principal1	3	-1	115715072	3046
ENSMUSG00000040187	protein_coding	Arntl2	ENSMUST00000111638	protein_coding	alternative2	6	1	146805530	1710
ENSMUSG00000097318	bidirectional_promoter_lncRNA	1700007L15Rik	ENSMUST00000180923	bidirectional_promoter_lncRNA		16	-1	33380727	737
ENSMUSG00000109923	processed_pseudogene	Gm20039	ENSMUST00000210329	processed_pseudogene		18	1	90585472	394
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000154318	retained_intron		2	1	121191947	845
ENSMUSG00000040187	protein_coding	Arntl2	ENSMUST00000136594	retained_intron		6	1	146820431	647
ENSMUSG00000091929	unprocessed_pseudogene	Gm8582	ENSMUST00000164061	unprocessed_pseudogene		14	1	19127800	789
ENSMUSG00000040187	protein_coding	Arntl2	ENSMUST00000203818	retained_intron		6	1	146822613	907
ENSMUSG00000107798	TEC	Gm44064	ENSMUST00000204964	TEC		6	1	87851209	1087
ENSMUSG00000059326	protein_coding	Csf2ra	ENSMUST00000237386	protein_coding	principal1	19	-1	61227376	1771
ENSMUSG00000091557	unprocessed_pseudogene	Gm8584	ENSMUST00000171982	unprocessed_pseudogene		14	1	19159695	758
ENSMUSG00000027263	protein_coding	Tubgcp4	ENSMUST00000186659	protein_coding	alternative1	2	1	121171209	2915
ENSMUSG00000100150	lincRNA	Gm19585	ENSMUST00000233901	lincRNA		17	1	51986415	1357
ENSMUSG00000040187	protein_coding	Arntl2	ENSMUST00000204578	retained_intron		6	1	146830524	2999
ENSMUSG00000052180	protein_coding	Serpinb6c	ENSMUST00000110273	protein_coding	principal1	13	-1	33905170	1325
ENSMUSG00000040187	protein_coding	Arntl2	ENSMUST00000080530	protein_coding	principal3	6	1	146805530	1740
ENSMUSG00000117768	bidirectional_promoter_lncRNA	8030456M14Rik	ENSMUST00000238029	bidirectional_promoter_lncRNA		19	1	53390789	1007
ENSMUSG00000059326	protein_coding	Csf2ra	ENSMUST00000236872	retained_intron		19	-1	61225490	632
ENSMUSG00000100150	lincRNA	Gm19585	ENSMUST00000233877	lincRNA		17	1	52028191	1616
ENSMUSG00000052180	protein_coding	Serpinb6c	ENSMUST00000222216	protein_coding		13	-1	33905707	654
ENSMUSG00000029062	protein_coding	Cdk11b	ENSMUST00000135550	processed_transcript		4	1	155624854	805
ENSMUSG00000100150	lincRNA	Gm19585	ENSMUST00000186007	lincRNA		17	1	52149289	1023
ENSMUSG00000100150	lincRNA	Gm19585	ENSMUST00000191539	lincRNA		17	1	52160143	327
ENSMUSG00000052180	protein_coding	Serpinb6c	ENSMUST00000172184	protein_coding	principal1	13	-1	33905708	1327
ENSMUSG00000097779	lincRNA	4833407H14Rik	ENSMUST00000180442	lincRNA		19	1	53460622	1494
ENSMUSG00000117170	processed_pseudogene	Gm19197	ENSMUST00000233260	processed_pseudogene		17	1	52008967	603
ENSMUSG00000052117	protein_coding	D630039A03Rik	ENSMUST00000063816	protein_coding	principal1	4	-1	57916297	2830
ENSMUSG00000018372	protein_coding	Cep95	ENSMUST00000018516	protein_coding	principal3	11	1	106789275	2696
ENSMUSG00000052769	lincRNA	Gm9889	ENSMUST00000064809	lincRNA		3	1	115715150	1579
ENSMUSG00000059326	protein_coding	Csf2ra	ENSMUST00000237877	retained_intron		19	-1	61227365	1326
ENSMUSG00000018372	protein_coding	Cep95	ENSMUST00000130019	processed_transcript		11	1	106789287	629
ENSMUSG00000052769	lincRNA	Gm9889	ENSMUST00000206983	pseudogene		3	1	115715150	1577
ENSMUSG00000104704	TEC	Gm43133	ENSMUST00000197472	TEC		5	-1	123561987	463
ENSMUSG00000018372	protein_coding	Cep95	ENSMUST00000133581	processed_transcript		11	1	106812326	289
ENSMUSG00000097636	processed_transcript	Mirt1	ENSMUST00000180489	lincRNA		19	-1	53464783	3261
ENSMUSG00000059326	protein_coding	Csf2ra	ENSMUST00000235483	processed_transcript		19	-1	61228418	654
ENSMUSG00000046337	protein_coding	Fam178b	ENSMUST00000170295	protein_coding	alternative2	1	-1	36683183	2286
ENSMUSG00000018372	protein_coding	Cep95	ENSMUST00000131244	processed_transcript		11	1	106814223	729
ENSMUSG00000097636	processed_transcript	Mirt1	ENSMUST00000180667	lincRNA		19	-1	53451491	1711
ENSMUSG00000058741	protein_coding	Prr19	ENSMUST00000080288	protein_coding	principal1	7	1	25301411	1240
ENSMUSG00000097636	processed_transcript	Mirt1	ENSMUST00000236192	lincRNA		19	-1	53454103	1637
ENSMUSG00000020024	protein_coding	Cep83	ENSMUST00000020212	protein_coding	principal1	10	1	94688654	3639
ENSMUSG00000018372	protein_coding	Cep95	ENSMUST00000149279	processed_transcript		11	1	106817834	813
ENSMUSG00000030361	protein_coding	Klrb1a	ENSMUST00000032512	protein_coding	principal3	6	-1	128622934	1274
ENSMUSG00000059326	protein_coding	Csf2ra	ENSMUST00000237286	retained_intron		19	-1	61227236	291
ENSMUSG00000018372	protein_coding	Cep95	ENSMUST00000124898	protein_coding		11	1	106817879	712
ENSMUSG00000059326	protein_coding	Csf2ra	ENSMUST00000235987	processed_transcript		19	-1	61228429	330
ENSMUSG00000004894	protein_coding	Hapln2	ENSMUST00000160737	retained_intron		3	-1	88027583	2338
ENSMUSG00000020420	protein_coding	Zfp607a	ENSMUST00000205715	protein_coding	principal1	7	1	27857527	4031
ENSMUSG00000097636	processed_transcript	Mirt1	ENSMUST00000181539	retained_intron		19	-1	53454094	2259
ENSMUSG00000097636	processed_transcript	Mirt1	ENSMUST00000236257	lincRNA		19	-1	53454136	325
ENSMUSG00000020420	protein_coding	Zfp607a	ENSMUST00000205534	protein_coding	principal1	7	1	27860585	3511
ENSMUSG00000020024	protein_coding	Cep83	ENSMUST00000220052	retained_intron		10	1	94688670	3910
ENSMUSG00000097636	processed_transcript	Mirt1	ENSMUST00000237144	retained_intron		19	-1	53464796	1958
ENSMUSG00000020420	protein_coding	Zfp607a	ENSMUST00000053722	protein_coding	principal1	7	1	27862557	2061
ENSMUSG00000059326	protein_coding	Csf2ra	ENSMUST00000076046	protein_coding	principal1	19	-1	61228418	1849
ENSMUSG00000026575	protein_coding	Nme7	ENSMUST00000193808	nonsense_mediated_decay		1	1	164304121	2536
ENSMUSG00000018372	protein_coding	Cep95	ENSMUST00000103068	protein_coding	alternative2	11	1	106789252	2597
ENSMUSG00000030361	protein_coding	Klrb1a	ENSMUST00000171306	protein_coding	alternative2	6	-1	128622872	989
ENSMUSG00000020024	protein_coding	Cep83	ENSMUST00000220352	retained_intron		10	1	94688718	1842
ENSMUSG00000117740	processed_pseudogene	Gm4242	ENSMUST00000237169	processed_pseudogene		19	-1	61232926	331
ENSMUSG00000026575	protein_coding	Nme7	ENSMUST00000193683	protein_coding	principal1	1	1	164307672	1740
ENSMUSG00000117951	processed_pseudogene	Gm50357	ENSMUST00000237978	processed_pseudogene		19	-1	61257789	256
ENSMUSG00000117782	processed_pseudogene	Gm18999	ENSMUST00000236016	processed_pseudogene		19	1	61255967	1570
ENSMUSG00000030361	protein_coding	Klrb1a	ENSMUST00000203275	protein_coding		6	-1	128622816	649
ENSMUSG00000073781	lincRNA	Gm6471	ENSMUST00000148734	lincRNA		7	1	142815252	587
ENSMUSG00000108167	protein_coding	Olfr1386	ENSMUST00000204518	protein_coding	principal1	11	1	49465052	2553
ENSMUSG00000118197	processed_pseudogene	Gm20762	ENSMUST00000237261	processed_pseudogene		19	-1	61305280	243
ENSMUSG00000030361	protein_coding	Klrb1a	ENSMUST00000204819	protein_coding		6	-1	128622913	755
ENSMUSG00000108167	protein_coding	Olfr1386	ENSMUST00000213674	protein_coding	principal1	11	1	49465046	2457
ENSMUSG00000070877	protein_coding	Ldlrad1	ENSMUST00000094916	protein_coding	principal1	4	1	107209180	1093
ENSMUSG00000073781	lincRNA	Gm6471	ENSMUST00000097935	lincRNA		7	1	142831227	805
ENSMUSG00000030361	protein_coding	Klrb1a	ENSMUST00000203150	protein_coding		6	-1	128623533	605
ENSMUSG00000108952	lincRNA	Gm39117	ENSMUST00000207692	lincRNA		7	-1	142857582	1569
ENSMUSG00000073491	protein_coding	Ifi213	ENSMUST00000150649	protein_coding	alternative2	1	-1	173599074	2748
ENSMUSG00000028800	protein_coding	Hdac1	ENSMUST00000102597	protein_coding	principal1	4	-1	129542713	2038
ENSMUSG00000073491	protein_coding	Ifi213	ENSMUST00000178186	retained_intron		1	-1	173580353	3090
ENSMUSG00000080299	processed_pseudogene	Gm14350	ENSMUST00000116642	processed_pseudogene		X	-1	4077264	640
ENSMUSG00000083722	transcribed_unitary_pseudogene	Adgrd2-ps	ENSMUST00000239173	processed_transcript		2	1	38669417	2918
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000230812	retained_intron		15	-1	102350478	2230
ENSMUSG00000108167	protein_coding	Olfr1386	ENSMUST00000071905	protein_coding	principal1	11	1	49470054	1128
ENSMUSG00000118378	TEC	Gm50393	ENSMUST00000235451	TEC		19	1	53483494	2992
ENSMUSG00000115104	processed_pseudogene	Gm49029	ENSMUST00000228565	processed_pseudogene		14	1	33202858	406
ENSMUSG00000083722	transcribed_unitary_pseudogene	Adgrd2-ps	ENSMUST00000118797	transcribed_unitary_pseudogene		2	1	38671158	2888
ENSMUSG00000095117	IG_V_gene	Ighv8-9	ENSMUST00000197803	IG_V_gene		12	-1	115468780	363
ENSMUSG00000083722	transcribed_unitary_pseudogene	Adgrd2-ps	ENSMUST00000239315	processed_transcript		2	1	38672228	1375
ENSMUSG00000073491	protein_coding	Ifi213	ENSMUST00000179648	processed_transcript		1	-1	173580400	1694
ENSMUSG00000115523	processed_pseudogene	Gm6340	ENSMUST00000227859	processed_pseudogene		14	1	33213160	233
ENSMUSG00000095117	IG_V_gene	Ighv8-9	ENSMUST00000103533	IG_V_gene	principal1	12	-1	115468632	301
ENSMUSG00000083722	transcribed_unitary_pseudogene	Adgrd2-ps	ENSMUST00000152645	processed_transcript		2	1	38672537	366
ENSMUSG00000004894	protein_coding	Hapln2	ENSMUST00000005014	protein_coding	principal1	3	-1	88027478	1711
ENSMUSG00000020024	protein_coding	Cep83	ENSMUST00000218076	processed_transcript		10	1	94740084	1692
ENSMUSG00000028800	protein_coding	Hdac1	ENSMUST00000145628	retained_intron		4	-1	129517518	844
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000188866	protein_coding	principal1	15	1	74955051	2068
ENSMUSG00000084955	processed_pseudogene	Gm14349	ENSMUST00000137155	processed_pseudogene		X	1	4118240	902
ENSMUSG00000026575	protein_coding	Nme7	ENSMUST00000195474	processed_transcript		1	1	164307727	2324
ENSMUSG00000004894	protein_coding	Hapln2	ENSMUST00000162352	retained_intron		3	-1	88023673	521
ENSMUSG00000117197	processed_pseudogene	Gm6618	ENSMUST00000232948	processed_pseudogene		17	1	12356482	1127
ENSMUSG00000026575	protein_coding	Nme7	ENSMUST00000192225	retained_intron		1	1	164307748	513
ENSMUSG00000105242	processed_pseudogene	Gm9236	ENSMUST00000196892	processed_pseudogene		12	1	115476037	587
ENSMUSG00000082081	processed_pseudogene	Gm14358	ENSMUST00000118458	processed_pseudogene		X	1	4143537	403
ENSMUSG00000004894	protein_coding	Hapln2	ENSMUST00000160150	nonsense_mediated_decay		3	-1	88027492	658
ENSMUSG00000026575	protein_coding	Nme7	ENSMUST00000191947	protein_coding	principal1	1	1	164308073	1635
ENSMUSG00000028800	protein_coding	Hdac1	ENSMUST00000142984	retained_intron		4	-1	129522790	810
ENSMUSG00000105843	TEC	Gm19439	ENSMUST00000198195	TEC		3	1	88030878	2273
ENSMUSG00000031165	protein_coding	Was	ENSMUST00000033505	protein_coding	principal1	X	-1	8090498	2114
ENSMUSG00000093977	processed_pseudogene	Gm14362	ENSMUST00000121679	processed_pseudogene		X	-1	4148004	273
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000187606	protein_coding	principal1	15	1	74955106	735
ENSMUSG00000026575	protein_coding	Nme7	ENSMUST00000193237	retained_intron		1	1	164308097	1974
ENSMUSG00000028800	protein_coding	Hdac1	ENSMUST00000125718	retained_intron		4	-1	129528999	759
ENSMUSG00000073491	protein_coding	Ifi213	ENSMUST00000097462	protein_coding	principal2	1	-1	173599274	2680
ENSMUSG00000082489	processed_pseudogene	Gm14356	ENSMUST00000118322	processed_pseudogene		X	1	4192857	869
ENSMUSG00000028800	protein_coding	Hdac1	ENSMUST00000150105	retained_intron		4	-1	129524584	803
ENSMUSG00000110009	lincRNA	4930543E12Rik	ENSMUST00000209589	lincRNA		7	-1	113142023	1227
ENSMUSG00000034765	protein_coding	Dusp5	ENSMUST00000038287	protein_coding	principal1	19	1	53529109	2473
ENSMUSG00000031165	protein_coding	Was	ENSMUST00000146029	retained_intron		X	-1	8088765	707
ENSMUSG00000028800	protein_coding	Hdac1	ENSMUST00000132909	retained_intron		4	-1	129524542	473
ENSMUSG00000110009	lincRNA	4930543E12Rik	ENSMUST00000210408	lincRNA		7	-1	113142015	1429
ENSMUSG00000049307	protein_coding	Fut4	ENSMUST00000061498	protein_coding	principal1	9	-1	14752393	4074
ENSMUSG00000026575	protein_coding	Nme7	ENSMUST00000194694	retained_intron		1	1	164345219	597
ENSMUSG00000028800	protein_coding	Hdac1	ENSMUST00000139305	retained_intron		4	-1	129542691	754
ENSMUSG00000118210	antisense	Gm50394	ENSMUST00000236686	antisense		19	-1	53529655	1047
ENSMUSG00000023032	protein_coding	Slc4a8	ENSMUST00000023776	protein_coding	principal3	15	1	100761747	11790
ENSMUSG00000037474	protein_coding	Dtl	ENSMUST00000027933	protein_coding	principal1	1	-1	191575544	4212
ENSMUSG00000092179	unprocessed_pseudogene	Vmn2r-ps75	ENSMUST00000173251	unprocessed_pseudogene		7	1	85798314	219
ENSMUSG00000073491	protein_coding	Ifi213	ENSMUST00000180215	protein_coding	principal2	1	-1	173599109	643
ENSMUSG00000115204	lincRNA	Gm36642	ENSMUST00000228618	lincRNA		15	-1	25593091	1680
ENSMUSG00000092307	unprocessed_pseudogene	Vmn2r-ps76	ENSMUST00000173876	unprocessed_pseudogene		7	-1	85816185	739
ENSMUSG00000094307	protein_coding	Btbd35f28	ENSMUST00000105015	protein_coding	principal1	X	1	4196576	1960
ENSMUSG00000046337	protein_coding	Fam178b	ENSMUST00000193548	processed_transcript		1	-1	36589317	851
ENSMUSG00000092287	unprocessed_pseudogene	Vmn2r-ps77	ENSMUST00000174505	unprocessed_pseudogene		7	1	85821914	337
ENSMUSG00000023032	protein_coding	Slc4a8	ENSMUST00000161564	protein_coding		15	1	100761869	445
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000189186	protein_coding		15	1	74955142	795
ENSMUSG00000046337	protein_coding	Fam178b	ENSMUST00000193763	processed_transcript		1	-1	36593332	905
ENSMUSG00000026575	protein_coding	Nme7	ENSMUST00000193591	processed_transcript		1	1	164373269	661
ENSMUSG00000023032	protein_coding	Slc4a8	ENSMUST00000160256	retained_intron		15	1	100761888	421
ENSMUSG00000071497	protein_coding	Nutf2-ps1	ENSMUST00000095978	protein_coding	principal1	19	-1	53589068	901
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000187284	protein_coding	principal1	15	1	74955164	654
ENSMUSG00000117076	lincRNA	Gm41600	ENSMUST00000232754	lincRNA		17	1	52304567	507
ENSMUSG00000026575	protein_coding	Nme7	ENSMUST00000192710	processed_transcript		1	1	164373269	687
ENSMUSG00000046337	protein_coding	Fam178b	ENSMUST00000194025	nonsense_mediated_decay		1	-1	36600411	673
ENSMUSG00000026575	protein_coding	Nme7	ENSMUST00000086028	protein_coding		1	1	164312879	834
ENSMUSG00000118159	TEC	Gm50402	ENSMUST00000236407	TEC		19	-1	53599411	870
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000190810	protein_coding		15	1	74955178	924
ENSMUSG00000023032	protein_coding	Slc4a8	ENSMUST00000162049	protein_coding	alternative2	15	1	100781254	3532
ENSMUSG00000117033	lincRNA	Gm49912	ENSMUST00000232735	lincRNA		17	-1	52350056	659
ENSMUSG00000046337	protein_coding	Fam178b	ENSMUST00000194839	nonsense_mediated_decay		1	-1	36600954	712
ENSMUSG00000102693	TEC	4933401J01Rik	ENSMUST00000193812	TEC		1	1	3073253	1070
ENSMUSG00000037474	protein_coding	Dtl	ENSMUST00000195765	processed_transcript		1	-1	191575514	3174
ENSMUSG00000023032	protein_coding	Slc4a8	ENSMUST00000162805	retained_intron		15	1	100802748	641
ENSMUSG00000117035	lincRNA	Gm5094	ENSMUST00000233404	lincRNA		17	-1	52461765	2586
ENSMUSG00000046337	protein_coding	Fam178b	ENSMUST00000193155	processed_transcript		1	-1	36587687	435
ENSMUSG00000037474	protein_coding	Dtl	ENSMUST00000193977	nonsense_mediated_decay		1	-1	191575513	4300
ENSMUSG00000046337	protein_coding	Fam178b	ENSMUST00000195729	processed_transcript		1	-1	36600432	690
ENSMUSG00000091260	protein_coding	Vmn2r19	ENSMUST00000073948	protein_coding	principal1	6	1	123308333	2565
ENSMUSG00000037474	protein_coding	Dtl	ENSMUST00000194064	retained_intron		1	-1	191575511	1787
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000185861	protein_coding	principal1	15	1	74955186	838
ENSMUSG00000023032	protein_coding	Slc4a8	ENSMUST00000162483	processed_transcript		15	1	100812189	790
ENSMUSG00000046337	protein_coding	Fam178b	ENSMUST00000114981	protein_coding	principal3	1	-1	36683183	1659
ENSMUSG00000037474	protein_coding	Dtl	ENSMUST00000192014	retained_intron		1	-1	191575513	4693
ENSMUSG00000023032	protein_coding	Slc4a8	ENSMUST00000162744	retained_intron		15	1	100814354	374
ENSMUSG00000115912	lincRNA	Gm35569	ENSMUST00000230694	lincRNA		15	-1	100832391	1722
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000012440	protein_coding	principal2	17	-1	46283010	2426
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000185863	protein_coding		15	1	74955241	617
ENSMUSG00000089906	processed_pseudogene	Gm6428	ENSMUST00000161062	processed_pseudogene		1	1	36601802	345
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000191127	protein_coding		15	1	74955260	575
ENSMUSG00000116646	antisense	Gm49763	ENSMUST00000231421	antisense		13	1	74494143	560
ENSMUSG00000113019	lincRNA	Gm47467	ENSMUST00000220784	lincRNA		13	-1	74522461	395
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000191436	protein_coding	principal1	15	1	74955653	1122
ENSMUSG00000104731	processed_pseudogene	Gm43249	ENSMUST00000200464	processed_pseudogene		5	-1	99839990	458
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000225413	protein_coding	alternative2	17	-1	46263787	2189
ENSMUSG00000043987	protein_coding	Cep164	ENSMUST00000117194	protein_coding	principal2	9	-1	45828691	5541
ENSMUSG00000103377	TEC	Gm37180	ENSMUST00000195335	TEC		1	-1	3368549	2819
ENSMUSG00000113660	processed_pseudogene	Gm5626	ENSMUST00000222151	processed_pseudogene		13	1	74533526	1058
ENSMUSG00000105108	TEC	Gm42687	ENSMUST00000199075	TEC		3	1	115910370	164
ENSMUSG00000105017	TEC	Gm43107	ENSMUST00000198729	TEC		3	-1	115914063	255
ENSMUSG00000050910	protein_coding	Cdr2l	ENSMUST00000053288	protein_coding	principal1	11	1	115381916	3700
ENSMUSG00000089699	antisense	Gm1992	ENSMUST00000161581	antisense		1	1	3466587	250
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000186927	retained_intron		15	1	74955666	1201
ENSMUSG00000103147	processed_pseudogene	Gm7341	ENSMUST00000192183	processed_pseudogene		1	1	3531795	926
ENSMUSG00000094145	protein_coding	Vmn2r20	ENSMUST00000172199	protein_coding	principal1	6	-1	123418116	14366
ENSMUSG00000043987	protein_coding	Cep164	ENSMUST00000216284	protein_coding		9	-1	45803256	4819
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000188503	retained_intron		15	1	74955668	1211
ENSMUSG00000102851	processed_pseudogene	Gm18956	ENSMUST00000192857	processed_pseudogene		1	1	3252757	480
ENSMUSG00000094145	protein_coding	Vmn2r20	ENSMUST00000232807	nonsense_mediated_decay		6	-1	123418116	15552
ENSMUSG00000043987	protein_coding	Cep164	ENSMUST00000214971	retained_intron		9	-1	45768777	553
ENSMUSG00000081042	transcribed_processed_pseudogene	Psmb7-ps2	ENSMUST00000118546	transcribed_processed_pseudogene		X	1	8105294	820
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000191145	protein_coding		15	1	74955672	431
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000191439	retained_intron		15	1	74955683	815
ENSMUSG00000102331	sense_intronic	Gm19938	ENSMUST00000192692	sense_intronic		1	-1	3658904	3259
ENSMUSG00000110496	TEC	Gm45909	ENSMUST00000212413	TEC		8	-1	93191358	1031
ENSMUSG00000104344	TEC	Gm38077	ENSMUST00000193657	TEC		9	1	105064777	3245
ENSMUSG00000043987	protein_coding	Cep164	ENSMUST00000213154	protein_coding	alternative2	9	-1	45823727	6105
ENSMUSG00000031698	protein_coding	Mylk3	ENSMUST00000034133	protein_coding	principal3	8	-1	85365324	3696
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000188042	protein_coding	principal1	15	1	74956555	714
ENSMUSG00000103201	TEC	Gm37329	ENSMUST00000192973	TEC		1	-1	3514507	2057
ENSMUSG00000043987	protein_coding	Cep164	ENSMUST00000152629	retained_intron		9	-1	45772531	680
ENSMUSG00000086404	processed_transcript	Gm6787	ENSMUST00000123120	processed_transcript		X	1	8097087	1454
ENSMUSG00000043987	protein_coding	Cep164	ENSMUST00000132430	protein_coding	alternative2	9	-1	45802667	1880
ENSMUSG00000103025	TEC	Gm37686	ENSMUST00000194099	TEC		1	-1	3467285	2309
ENSMUSG00000092356	protein_coding	Gm20532	ENSMUST00000174066	nonsense_mediated_decay	principal1	2	1	26586639	780
ENSMUSG00000051951	protein_coding	Xkr4	ENSMUST00000162897	processed_transcript		1	-1	3216344	4153
ENSMUSG00000031698	protein_coding	Mylk3	ENSMUST00000122452	protein_coding	alternative2	8	-1	85380978	3036
ENSMUSG00000043987	protein_coding	Cep164	ENSMUST00000217554	nonsense_mediated_decay		9	-1	45794266	770
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000214144	protein_coding		9	-1	57440091	724
ENSMUSG00000043987	protein_coding	Cep164	ENSMUST00000217022	retained_intron		9	-1	45794589	2452
ENSMUSG00000051951	protein_coding	Xkr4	ENSMUST00000159265	processed_transcript		1	-1	3215632	2989
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000214166	protein_coding		9	-1	57440115	318
ENSMUSG00000043987	protein_coding	Cep164	ENSMUST00000214868	protein_coding		9	-1	45828639	360
ENSMUSG00000031698	protein_coding	Mylk3	ENSMUST00000121972	protein_coding	alternative2	8	-1	85365347	2407
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000214624	protein_coding		9	-1	57440097	1814
ENSMUSG00000115757	unprocessed_pseudogene	Gm48934	ENSMUST00000228271	unprocessed_pseudogene		14	1	55989063	295
ENSMUSG00000031698	protein_coding	Mylk3	ENSMUST00000137290	protein_coding		8	-1	85386345	408
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000081154	protein_coding	principal3	1	1	65186702	11237
ENSMUSG00000029434	protein_coding	Vps33a	ENSMUST00000031388	protein_coding	principal1	5	-1	123573038	4235
ENSMUSG00000051951	protein_coding	Xkr4	ENSMUST00000070533	protein_coding	principal1	1	-1	3671498	3634
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000051698	protein_coding	principal1	15	1	74955071	2281
ENSMUSG00000058581	processed_pseudogene	Gm5801	ENSMUST00000182247	processed_pseudogene		14	-1	56011315	780
ENSMUSG00000087022	processed_transcript	9130024F11Rik	ENSMUST00000135238	antisense		1	1	56971412	1300
ENSMUSG00000031698	protein_coding	Mylk3	ENSMUST00000138825	retained_intron		8	-1	85381034	325
ENSMUSG00000022587	protein_coding	Ly6e	ENSMUST00000169343	protein_coding	principal1	15	1	74955051	2154
ENSMUSG00000104017	TEC	Gm37363	ENSMUST00000192336	TEC		1	-1	3377788	2233
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000213081	processed_transcript		1	1	65186704	1790
ENSMUSG00000087022	processed_transcript	9130024F11Rik	ENSMUST00000187927	antisense		1	1	56971478	517
ENSMUSG00000029434	protein_coding	Vps33a	ENSMUST00000200325	retained_intron		5	-1	123559019	652
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000186404	retained_intron		1	1	65186704	4266
ENSMUSG00000103161	TEC	Gm38148	ENSMUST00000195166	TEC		1	-1	3595903	3012
ENSMUSG00000105522	processed_pseudogene	Gm15235	ENSMUST00000200572	processed_pseudogene		3	1	94589466	194
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000164342	protein_coding	principal2	17	-1	46283013	2559
ENSMUSG00000084895	antisense	AA672651	ENSMUST00000151550	antisense		8	1	85339343	489
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000085709	protein_coding	principal1	9	-1	57440096	2744
ENSMUSG00000029434	protein_coding	Vps33a	ENSMUST00000198900	retained_intron		5	-1	123569581	520
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000185263	nonsense_mediated_decay		1	1	65186713	443
ENSMUSG00000026922	protein_coding	Agpat2	ENSMUST00000131940	processed_transcript		2	-1	26604211	1273
ENSMUSG00000087022	processed_transcript	9130024F11Rik	ENSMUST00000185204	antisense		1	1	56971480	2628
ENSMUSG00000027894	protein_coding	Slc6a17	ENSMUST00000169449	protein_coding	alternative1	3	-1	107518018	6322
ENSMUSG00000101880	lincRNA	Gm29282	ENSMUST00000190720	lincRNA		1	-1	155057179	473
ENSMUSG00000029434	protein_coding	Vps33a	ENSMUST00000197467	nonsense_mediated_decay		5	-1	123572979	532
ENSMUSG00000101433	processed_pseudogene	Gm29441	ENSMUST00000191584	processed_pseudogene		1	1	155031739	211
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000097707	protein_coding	alternative2	1	1	65186750	6641
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000213479	nonsense_mediated_decay		9	-1	57421347	2797
ENSMUSG00000062896	processed_pseudogene	Rpl31-ps11	ENSMUST00000119898	processed_pseudogene		3	-1	94604784	377
ENSMUSG00000087022	processed_transcript	9130024F11Rik	ENSMUST00000195462	TEC		1	1	56972332	2862
ENSMUSG00000027894	protein_coding	Slc6a17	ENSMUST00000029499	protein_coding	principal3	3	-1	107518018	6308
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000216365	nonsense_mediated_decay		9	-1	57440107	1665
ENSMUSG00000068966	protein_coding	Zbtb34	ENSMUST00000113158	protein_coding	principal1	2	-1	33431324	6602
ENSMUSG00000025949	protein_coding	Pikfyve	ENSMUST00000190847	retained_intron		1	1	65196760	651
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000225080	protein_coding	principal2	17	-1	46282999	2412
ENSMUSG00000086845	antisense	Gm13010	ENSMUST00000140495	antisense		4	-1	137438395	828
ENSMUSG00000068966	protein_coding	Zbtb34	ENSMUST00000134589	processed_transcript		2	-1	33431317	664
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000214339	protein_coding		9	-1	57440103	738
ENSMUSG00000087022	processed_transcript	9130024F11Rik	ENSMUST00000187858	antisense		1	1	57040393	447
ENSMUSG00000068966	protein_coding	Zbtb34	ENSMUST00000091037	protein_coding	principal1	2	-1	33428222	6510
ENSMUSG00000096950	lincRNA	Gm9530	ENSMUST00000181160	lincRNA		1	-1	155083266	3281
ENSMUSG00000027894	protein_coding	Slc6a17	ENSMUST00000168211	nonsense_mediated_decay		3	-1	107500530	4174
ENSMUSG00000104310	TEC	Gm4081	ENSMUST00000195287	TEC		1	1	56976803	1838
ENSMUSG00000027894	protein_coding	Slc6a17	ENSMUST00000171029	processed_transcript		3	-1	107468705	496
ENSMUSG00000046811	protein_coding	Gltpd2	ENSMUST00000057685	protein_coding	principal2	11	1	70519196	1216
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000213194	nonsense_mediated_decay		9	-1	57437483	756
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000224404	retained_intron		17	-1	46282978	1095
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000217255	processed_transcript		9	-1	57421318	477
ENSMUSG00000046811	protein_coding	Gltpd2	ENSMUST00000179000	protein_coding	alternative2	11	1	70519639	794
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000225943	protein_coding		17	-1	46283005	419
ENSMUSG00000069922	protein_coding	Ces3a	ENSMUST00000093222	protein_coding	principal4	8	1	105048601	2046
ENSMUSG00000030669	protein_coding	Calca	ENSMUST00000032906	protein_coding	principal1	7	-1	114636357	994
ENSMUSG00000022227	protein_coding	Mcpt1	ENSMUST00000022836	protein_coding	principal1	14	1	56017971	1014
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000225359	protein_coding		17	-1	46282997	737
ENSMUSG00000114004	protein_coding	Gm48552	ENSMUST00000125635	protein_coding	principal1	10	1	81389005	831
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000215883	protein_coding		9	-1	57440097	578
ENSMUSG00000081402	processed_pseudogene	Gm15455	ENSMUST00000117459	processed_pseudogene		1	-1	33838680	2557
ENSMUSG00000027894	protein_coding	Slc6a17	ENSMUST00000170429	processed_transcript		3	-1	107517749	3076
ENSMUSG00000030669	protein_coding	Calca	ENSMUST00000205560	retained_intron		7	-1	114632645	568
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000214065	protein_coding		9	-1	57440124	817
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000225288	protein_coding		17	-1	46282695	367
ENSMUSG00000027894	protein_coding	Slc6a17	ENSMUST00000167975	processed_transcript		3	-1	107493196	489
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000214519	processed_transcript		9	-1	57425330	624
ENSMUSG00000114004	protein_coding	Gm48552	ENSMUST00000156229	protein_coding	principal1	10	1	81390311	621
ENSMUSG00000030669	protein_coding	Calca	ENSMUST00000206156	protein_coding		7	-1	114636307	404
ENSMUSG00000027894	protein_coding	Slc6a17	ENSMUST00000167898	retained_intron		3	-1	107518018	3011
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000224055	protein_coding		17	-1	46270771	336
ENSMUSG00000063849	protein_coding	Ppcdc	ENSMUST00000215299	protein_coding		9	-1	57440114	400
ENSMUSG00000069922	protein_coding	Ces3a	ENSMUST00000212329	retained_intron		8	1	105048603	820
ENSMUSG00000027894	protein_coding	Slc6a17	ENSMUST00000169413	processed_transcript		3	-1	107517945	449
ENSMUSG00000018286	protein_coding	Psmb6	ENSMUST00000145503	retained_intron		11	1	70525367	669
ENSMUSG00000056973	protein_coding	Ces1d	ENSMUST00000034172	protein_coding	principal1	8	-1	93197838	2004
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000225915	processed_transcript		17	-1	46269808	362
ENSMUSG00000080955	processed_pseudogene	Gm14263	ENSMUST00000117955	processed_pseudogene		2	-1	170954824	746
ENSMUSG00000069922	protein_coding	Ces3a	ENSMUST00000213054	retained_intron		8	1	105048603	745
ENSMUSG00000036553	protein_coding	Sh3tc1	ENSMUST00000127825	protein_coding		5	-1	35721603	3875
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000224230	protein_coding		17	-1	46282656	588
ENSMUSG00000029859	protein_coding	Epha1	ENSMUST00000073387	protein_coding	principal1	6	-1	42373268	3273
ENSMUSG00000027894	protein_coding	Slc6a17	ENSMUST00000166892	protein_coding		3	-1	107517337	513
ENSMUSG00000047694	protein_coding	Yipf6	ENSMUST00000054697	protein_coding	principal1	X	1	98937761	5211
ENSMUSG00000056973	protein_coding	Ces1d	ENSMUST00000143256	retained_intron		8	-1	93169975	391
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000036759	protein_coding	principal1	6	1	116208038	4307
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000224696	retained_intron		17	-1	46263958	729
ENSMUSG00000027894	protein_coding	Slc6a17	ENSMUST00000166736	processed_transcript		3	-1	107517327	391
ENSMUSG00000069922	protein_coding	Ces3a	ENSMUST00000093223	protein_coding	alternative2	8	1	105048603	1903
ENSMUSG00000029859	protein_coding	Epha1	ENSMUST00000204357	protein_coding		6	-1	42373268	2948
ENSMUSG00000056973	protein_coding	Ces1d	ENSMUST00000148340	retained_intron		8	-1	93175289	574
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000224901	protein_coding		17	-1	46272155	555
ENSMUSG00000032621	protein_coding	Srek1	ENSMUST00000210489	protein_coding		13	-1	103764582	6330
ENSMUSG00000056973	protein_coding	Ces1d	ENSMUST00000129987	retained_intron		8	-1	93197777	387
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000204476	protein_coding		6	1	116208046	2861
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000224090	processed_transcript		17	-1	46283005	468
ENSMUSG00000029859	protein_coding	Epha1	ENSMUST00000204238	retained_intron		6	-1	42373235	1004
ENSMUSG00000090574	TR_J_pseudogene	Traj61	ENSMUST00000165025	TR_J_pseudogene		14	1	54155005	72
ENSMUSG00000030669	protein_coding	Calca	ENSMUST00000032907	protein_coding		7	-1	114636312	830
ENSMUSG00000047694	protein_coding	Yipf6	ENSMUST00000113811	protein_coding	principal1	X	1	98936316	930
ENSMUSG00000113047	lincRNA	Gm47469	ENSMUST00000221408	lincRNA		13	-1	74556948	1428
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000225741	processed_transcript		17	-1	46283014	122
ENSMUSG00000073006	protein_coding	Gm732	ENSMUST00000101290	protein_coding	principal2	X	-1	107948436	1661
ENSMUSG00000069922	protein_coding	Ces3a	ENSMUST00000212481	processed_transcript		8	1	105053653	629
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000224445	processed_transcript		17	-1	46282937	365
ENSMUSG00000030669	protein_coding	Calca	ENSMUST00000206853	protein_coding		7	-1	114636295	720
ENSMUSG00000113047	lincRNA	Gm47469	ENSMUST00000222092	lincRNA		13	-1	74564256	704
ENSMUSG00000113047	lincRNA	Gm47469	ENSMUST00000222245	lincRNA		13	-1	74563874	373
ENSMUSG00000030669	protein_coding	Calca	ENSMUST00000205933	protein_coding		7	-1	114636306	458
ENSMUSG00000073006	protein_coding	Gm732	ENSMUST00000155294	protein_coding	alternative2	X	-1	107948465	469
ENSMUSG00000047694	protein_coding	Yipf6	ENSMUST00000149082	retained_intron		X	1	98937761	2908
ENSMUSG00000030669	protein_coding	Calca	ENSMUST00000205714	protein_coding		7	-1	114636271	416
ENSMUSG00000012296	protein_coding	Tjap1	ENSMUST00000180283	protein_coding	principal2	17	-1	46283026	2368
ENSMUSG00000032621	protein_coding	Srek1	ENSMUST00000074616	protein_coding	principal1	13	-1	103774608	3934
ENSMUSG00000029430	protein_coding	Ran	ENSMUST00000031383	protein_coding	principal1	5	1	129020069	2377
ENSMUSG00000033256	protein_coding	Shf	ENSMUST00000048635	protein_coding	principal2	2	-1	122366828	1431
ENSMUSG00000047694	protein_coding	Yipf6	ENSMUST00000140479	retained_intron		X	1	98938207	1020
ENSMUSG00000114906	processed_pseudogene	Gm48098	ENSMUST00000223602	processed_pseudogene		14	1	19263216	282
ENSMUSG00000047694	protein_coding	Yipf6	ENSMUST00000151353	protein_coding		X	1	98937273	690
ENSMUSG00000083227	unprocessed_pseudogene	Gm11546	ENSMUST00000120297	unprocessed_pseudogene		11	-1	94797777	354
ENSMUSG00000047694	protein_coding	Yipf6	ENSMUST00000124010	protein_coding		X	1	98937301	284
ENSMUSG00000032621	protein_coding	Srek1	ENSMUST00000210269	retained_intron		13	-1	103749126	619
ENSMUSG00000105078	protein_coding	Vamp9	ENSMUST00000212164	nonsense_mediated_decay		5	1	99906254	666
ENSMUSG00000084818	lincRNA	Gm14640	ENSMUST00000145800	lincRNA		2	1	171215499	437
ENSMUSG00000105078	protein_coding	Vamp9	ENSMUST00000212307	processed_transcript		5	1	99906267	635
ENSMUSG00000105078	protein_coding	Vamp9	ENSMUST00000212249	nonsense_mediated_decay		5	1	99906275	841
ENSMUSG00000026797	protein_coding	Stxbp1	ENSMUST00000050000	protein_coding	principal3	2	-1	32847245	3892
ENSMUSG00000114304	lincRNA	Gm48099	ENSMUST00000224018	lincRNA		14	1	19271274	486
ENSMUSG00000086613	lincRNA	1700007M16Rik	ENSMUST00000129075	lincRNA		2	1	171234009	435
ENSMUSG00000033554	protein_coding	Dph5	ENSMUST00000189799	protein_coding	principal1	3	1	115887837	1558
ENSMUSG00000026922	protein_coding	Agpat2	ENSMUST00000028286	protein_coding	principal1	2	-1	26604332	1489
ENSMUSG00000029430	protein_coding	Ran	ENSMUST00000134632	processed_transcript		5	1	129020202	229
ENSMUSG00000105078	protein_coding	Vamp9	ENSMUST00000198837	protein_coding	principal1	5	1	99906316	677
ENSMUSG00000040329	protein_coding	Il7	ENSMUST00000194279	protein_coding	principal1	3	-1	7613727	4858
ENSMUSG00000105078	protein_coding	Vamp9	ENSMUST00000200398	processed_transcript		5	1	99919208	600
ENSMUSG00000033554	protein_coding	Dph5	ENSMUST00000200258	protein_coding		3	1	115887852	351
ENSMUSG00000033256	protein_coding	Shf	ENSMUST00000151130	protein_coding		2	-1	122369137	1539
ENSMUSG00000029430	protein_coding	Ran	ENSMUST00000111343	protein_coding	principal1	5	1	129020272	2423
ENSMUSG00000026922	protein_coding	Agpat2	ENSMUST00000140386	processed_transcript		2	-1	26604417	1145
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000032931	protein_coding	principal4	7	1	101108733	4453
ENSMUSG00000033554	protein_coding	Dph5	ENSMUST00000196804	protein_coding		3	1	115888147	659
ENSMUSG00000018286	protein_coding	Psmb6	ENSMUST00000018430	protein_coding	principal1	11	1	70525386	798
ENSMUSG00000026922	protein_coding	Agpat2	ENSMUST00000140508	processed_transcript		2	-1	26603716	424
ENSMUSG00000026922	protein_coding	Agpat2	ENSMUST00000154753	protein_coding		2	-1	26603926	438
ENSMUSG00000081829	processed_pseudogene	Gm15460	ENSMUST00000118147	processed_pseudogene		3	1	137905009	391
ENSMUSG00000033554	protein_coding	Dph5	ENSMUST00000185098	nonsense_mediated_decay		3	1	115888165	1438
ENSMUSG00000018286	protein_coding	Psmb6	ENSMUST00000148535	retained_intron		11	1	70526110	966
ENSMUSG00000084829	lincRNA	Gm14266	ENSMUST00000146542	lincRNA		2	1	171253284	1067
ENSMUSG00000040329	protein_coding	Il7	ENSMUST00000168269	protein_coding		3	-1	7605864	2307
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000203286	nonsense_mediated_decay		6	1	116208056	812
ENSMUSG00000033256	protein_coding	Shf	ENSMUST00000125826	protein_coding		2	-1	122369162	1566
ENSMUSG00000032621	protein_coding	Srek1	ENSMUST00000211491	processed_transcript		13	-1	103769348	1567
ENSMUSG00000084829	lincRNA	Gm14266	ENSMUST00000125631	lincRNA		2	1	171193269	718
ENSMUSG00000026797	protein_coding	Stxbp1	ENSMUST00000113222	processed_transcript		2	-1	32817190	3598
ENSMUSG00000018286	protein_coding	Psmb6	ENSMUST00000128870	retained_intron		11	1	70527072	674
ENSMUSG00000033256	protein_coding	Shf	ENSMUST00000110532	protein_coding		2	-1	122368832	1116
ENSMUSG00000032621	protein_coding	Srek1	ENSMUST00000210643	processed_transcript		13	-1	103766608	1392
ENSMUSG00000106629	antisense	Gm40155	ENSMUST00000198291	antisense		3	-1	137878126	818
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000204446	retained_intron		6	1	116208095	525
ENSMUSG00000033256	protein_coding	Shf	ENSMUST00000139819	protein_coding		2	-1	122359586	1188
ENSMUSG00000032621	protein_coding	Srek1	ENSMUST00000211322	protein_coding		13	-1	103774093	1655
ENSMUSG00000021253	protein_coding	Tgfb3	ENSMUST00000003687	protein_coding	principal1	12	-1	86079041	3383
ENSMUSG00000033554	protein_coding	Dph5	ENSMUST00000106505	protein_coding		3	1	115888173	1836
ENSMUSG00000036499	protein_coding	Eea1	ENSMUST00000219207	retained_intron		10	1	95940650	1839
ENSMUSG00000033256	protein_coding	Shf	ENSMUST00000135848	retained_intron		2	-1	122354131	403
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000098250	protein_coding	alternative1	7	1	101108775	4316
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000204051	protein_coding		6	1	116208122	340
ENSMUSG00000032621	protein_coding	Srek1	ENSMUST00000211030	retained_intron		13	-1	103753664	690
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000203523	nonsense_mediated_decay		6	1	116208137	523
ENSMUSG00000032621	protein_coding	Srek1	ENSMUST00000210836	nonsense_mediated_decay		13	-1	103765033	2085
ENSMUSG00000040329	protein_coding	Il7	ENSMUST00000194184	protein_coding		3	-1	7612893	1785
ENSMUSG00000078440	protein_coding	Dohh	ENSMUST00000072751	protein_coding	principal1	10	1	81384428	1444
ENSMUSG00000032621	protein_coding	Srek1	ENSMUST00000209961	processed_transcript		13	-1	103768168	724
ENSMUSG00000033256	protein_coding	Shf	ENSMUST00000110530	protein_coding	alternative2	2	-1	122358266	910
ENSMUSG00000097902	antisense	Gm26531	ENSMUST00000181727	antisense		12	-1	85979021	1967
ENSMUSG00000040329	protein_coding	Il7	ENSMUST00000192202	protein_coding		3	-1	7613760	2057
ENSMUSG00000028163	protein_coding	Nfkb1	ENSMUST00000029812	protein_coding	principal1	3	-1	135691546	4117
ENSMUSG00000033256	protein_coding	Shf	ENSMUST00000121237	protein_coding		2	-1	122358240	882
ENSMUSG00000032621	protein_coding	Srek1	ENSMUST00000211139	processed_transcript		13	-1	103774606	641
ENSMUSG00000033554	protein_coding	Dph5	ENSMUST00000043342	protein_coding	principal1	3	1	115888183	1576
ENSMUSG00000042389	protein_coding	Tsen2	ENSMUST00000130425	protein_coding		6	1	115544664	638
ENSMUSG00000026797	protein_coding	Stxbp1	ENSMUST00000077458	protein_coding	alternative1	2	-1	32847202	3616
ENSMUSG00000033256	protein_coding	Shf	ENSMUST00000143484	protein_coding		2	-1	122357220	486
ENSMUSG00000028163	protein_coding	Nfkb1	ENSMUST00000132668	protein_coding		3	-1	135608270	2354
ENSMUSG00000078440	protein_coding	Dohh	ENSMUST00000142346	protein_coding		10	1	81384459	786
ENSMUSG00000036553	protein_coding	Sh3tc1	ENSMUST00000070203	protein_coding	principal1	5	-1	35729276	4549
ENSMUSG00000040329	protein_coding	Il7	ENSMUST00000191681	processed_transcript		3	-1	7613741	1402
ENSMUSG00000078440	protein_coding	Dohh	ENSMUST00000145416	retained_intron		10	1	81384467	495
ENSMUSG00000026797	protein_coding	Stxbp1	ENSMUST00000192333	retained_intron		2	-1	32817596	1083
ENSMUSG00000026797	protein_coding	Stxbp1	ENSMUST00000208840	protein_coding		2	-1	32847206	526
ENSMUSG00000033554	protein_coding	Dph5	ENSMUST00000197561	retained_intron		3	1	115888194	4082
ENSMUSG00000045211	protein_coding	Nudt18	ENSMUST00000089049	protein_coding	principal1	14	1	70577637	3926
ENSMUSG00000033256	protein_coding	Shf	ENSMUST00000110531	protein_coding	principal2	2	-1	122368918	1557
ENSMUSG00000096672	IG_V_gene	Ighv1-63	ENSMUST00000103534	IG_V_gene	principal1	12	-1	115496058	351
ENSMUSG00000078440	protein_coding	Dohh	ENSMUST00000134592	protein_coding		10	1	81384895	479
ENSMUSG00000032563	protein_coding	Mrpl3	ENSMUST00000149243	protein_coding		9	1	105053239	2309
ENSMUSG00000097804	antisense	Gm16685	ENSMUST00000181286	antisense		3	1	7612705	1592
ENSMUSG00000033554	protein_coding	Dph5	ENSMUST00000199970	retained_intron		3	1	115888195	520
ENSMUSG00000045211	protein_coding	Nudt18	ENSMUST00000228554	protein_coding		14	1	70577847	3619
ENSMUSG00000078440	protein_coding	Dohh	ENSMUST00000121047	protein_coding		10	1	81385621	946
ENSMUSG00000085397	antisense	Gm13524	ENSMUST00000125869	antisense		2	1	32846186	662
ENSMUSG00000107800	processed_pseudogene	Gm44478	ENSMUST00000204875	processed_pseudogene		6	-1	128643112	114
ENSMUSG00000028163	protein_coding	Nfkb1	ENSMUST00000184550	nonsense_mediated_decay		3	-1	135603796	1924
ENSMUSG00000045211	protein_coding	Nudt18	ENSMUST00000228768	protein_coding		14	1	70578092	1578
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000137196	processed_transcript		7	1	101108776	1155
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000145802	retained_intron		7	1	101108805	3133
ENSMUSG00000054426	processed_transcript	A930005H10Rik	ENSMUST00000188260	antisense		3	-1	115888094	739
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000142727	processed_transcript		7	1	101108880	528
ENSMUSG00000054426	processed_transcript	A930005H10Rik	ENSMUST00000185681	antisense		3	-1	115888130	625
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000203329	protein_coding		6	1	42349630	499
ENSMUSG00000094596	protein_coding	Btbd35f20	ENSMUST00000179325	protein_coding	principal1	X	-1	4291245	1960
ENSMUSG00000054426	processed_transcript	A930005H10Rik	ENSMUST00000185424	antisense		3	-1	115887952	433
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000130426	retained_intron		7	1	101108882	2235
ENSMUSG00000081807	processed_pseudogene	Gm14849	ENSMUST00000122293	processed_pseudogene		X	1	108060304	2846
ENSMUSG00000054426	processed_transcript	A930005H10Rik	ENSMUST00000187055	antisense		3	-1	115888104	436
ENSMUSG00000032563	protein_coding	Mrpl3	ENSMUST00000035177	protein_coding	principal1	9	1	105053239	3972
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000208063	retained_intron		7	1	101190243	2188
ENSMUSG00000113262	protein_coding	Gm48551	ENSMUST00000144647	nonsense_mediated_decay		10	1	81384466	1758
ENSMUSG00000054426	processed_transcript	A930005H10Rik	ENSMUST00000191182	retained_intron		3	-1	115888097	2094
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000151693	retained_intron		7	1	101244119	607
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000208638	retained_intron		7	1	101250842	3006
ENSMUSG00000113262	protein_coding	Gm48551	ENSMUST00000131968	protein_coding	principal1	10	1	81387317	672
ENSMUSG00000054426	processed_transcript	A930005H10Rik	ENSMUST00000185512	retained_intron		3	-1	115887887	385
ENSMUSG00000030691	protein_coding	Fchsd2	ENSMUST00000208917	retained_intron		7	1	101259669	2685
ENSMUSG00000054426	processed_transcript	A930005H10Rik	ENSMUST00000067500	processed_transcript		3	-1	115888130	309
ENSMUSG00000104803	TEC	Gm43108	ENSMUST00000200525	TEC		3	1	115913890	293
ENSMUSG00000042389	protein_coding	Tsen2	ENSMUST00000040234	protein_coding	principal1	6	1	115544664	2106
ENSMUSG00000032563	protein_coding	Mrpl3	ENSMUST00000190492	nonsense_mediated_decay		9	1	105053270	457
ENSMUSG00000086823	processed_transcript	1700028P15Rik	ENSMUST00000139894	lincRNA		2	-1	171962799	856
ENSMUSG00000026577	protein_coding	Blzf1	ENSMUST00000027866	protein_coding		1	-1	164307484	3948
ENSMUSG00000086823	processed_transcript	1700028P15Rik	ENSMUST00000151904	lincRNA		2	-1	171962131	519
ENSMUSG00000036186	protein_coding	Dipk1b	ENSMUST00000074240	protein_coding	principal1	2	1	26628457	1622
ENSMUSG00000098552	antisense	Gm27217	ENSMUST00000183438	antisense		17	-1	52602660	882
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000203846	protein_coding		6	1	42349780	695
ENSMUSG00000032563	protein_coding	Mrpl3	ENSMUST00000214036	protein_coding		9	1	105053270	562
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000207740	nonsense_mediated_decay		7	-1	101290612	473
ENSMUSG00000021721	protein_coding	Htr1a	ENSMUST00000022235	protein_coding	principal1	13	1	105443639	4484
ENSMUSG00000086823	processed_transcript	1700028P15Rik	ENSMUST00000125465	retained_intron		2	-1	171962824	3254
ENSMUSG00000116413	TEC	Gm49436	ENSMUST00000230034	TEC		15	-1	77366699	802
ENSMUSG00000032563	protein_coding	Mrpl3	ENSMUST00000131655	nonsense_mediated_decay		9	1	105053297	995
ENSMUSG00000036186	protein_coding	Dipk1b	ENSMUST00000153849	processed_transcript		2	1	26628494	610
ENSMUSG00000036499	protein_coding	Eea1	ENSMUST00000218291	nonsense_mediated_decay		10	1	95940691	2539
ENSMUSG00000082354	processed_pseudogene	Gm378	ENSMUST00000120797	processed_pseudogene		X	1	108405688	820
ENSMUSG00000036186	protein_coding	Dipk1b	ENSMUST00000144449	processed_transcript		2	1	26634203	732
ENSMUSG00000042389	protein_coding	Tsen2	ENSMUST00000123359	processed_transcript		6	1	115544702	423
ENSMUSG00000022324	protein_coding	Matn2	ENSMUST00000022947	protein_coding	principal2	15	1	34306681	3551
ENSMUSG00000042389	protein_coding	Tsen2	ENSMUST00000138200	retained_intron		6	1	115544706	4563
ENSMUSG00000117582	processed_pseudogene	Gm19853	ENSMUST00000234178	processed_pseudogene		17	-1	94858618	400
ENSMUSG00000022559	protein_coding	Fbxl6	ENSMUST00000023219	protein_coding	principal1	15	-1	76538735	1710
ENSMUSG00000036499	protein_coding	Eea1	ENSMUST00000218088	processed_transcript		10	1	95940708	2776
ENSMUSG00000039676	protein_coding	Capsl	ENSMUST00000042360	protein_coding	principal1	15	1	9436028	949
ENSMUSG00000042389	protein_coding	Tsen2	ENSMUST00000143520	retained_intron		6	1	115574448	415
ENSMUSG00000022378	protein_coding	Fam49b	ENSMUST00000063838	protein_coding	principal1	15	-1	64060448	3797
ENSMUSG00000085426	lincRNA	Gm14272	ENSMUST00000133525	lincRNA		2	-1	171989195	484
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000203802	retained_intron		6	1	116208206	4946
ENSMUSG00000026577	protein_coding	Blzf1	ENSMUST00000120447	protein_coding	principal1	1	-1	164307489	2430
ENSMUSG00000022324	protein_coding	Matn2	ENSMUST00000228570	protein_coding		15	1	34306685	2798
ENSMUSG00000039676	protein_coding	Capsl	ENSMUST00000226688	protein_coding		15	1	9436028	739
ENSMUSG00000113279	processed_pseudogene	Gm47470	ENSMUST00000221881	processed_pseudogene		13	-1	74570555	109
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000204283	protein_coding		6	1	116208516	3728
ENSMUSG00000022378	protein_coding	Fam49b	ENSMUST00000164532	protein_coding	principal1	15	-1	63997969	1770
ENSMUSG00000095193	lincRNA	Gm20939	ENSMUST00000234071	lincRNA		17	1	94864918	977
ENSMUSG00000095193	lincRNA	Gm20939	ENSMUST00000234295	lincRNA		17	1	94864918	3079
ENSMUSG00000095193	lincRNA	Gm20939	ENSMUST00000108007	lincRNA		17	1	94873986	1572
ENSMUSG00000032563	protein_coding	Mrpl3	ENSMUST00000142424	nonsense_mediated_decay		9	1	105053301	1394
ENSMUSG00000036553	protein_coding	Sh3tc1	ENSMUST00000127288	nonsense_mediated_decay		5	-1	35723946	3892
ENSMUSG00000032563	protein_coding	Mrpl3	ENSMUST00000214459	processed_transcript		9	1	105063766	811
ENSMUSG00000075325	lincRNA	Gm13582	ENSMUST00000146034	lincRNA		2	-1	60975151	2655
ENSMUSG00000032563	protein_coding	Mrpl3	ENSMUST00000215577	processed_transcript		9	1	105064805	1005
ENSMUSG00000074212	protein_coding	Dnajb14	ENSMUST00000090178	protein_coding	principal1	3	1	137867675	9477
ENSMUSG00000022378	protein_coding	Fam49b	ENSMUST00000228226	protein_coding	principal1	15	-1	64060343	1896
ENSMUSG00000087100	lincRNA	Gm14641	ENSMUST00000136486	lincRNA		2	-1	172003995	452
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000203161	retained_intron		6	1	116220554	735
ENSMUSG00000022324	protein_coding	Matn2	ENSMUST00000227759	protein_coding	alternative2	15	1	34306685	3569
ENSMUSG00000022378	protein_coding	Fam49b	ENSMUST00000228908	protein_coding		15	-1	64060478	634
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000203928	protein_coding		6	1	116221879	324
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000041208	protein_coding	principal1	15	-1	102350759	1811
ENSMUSG00000083334	processed_pseudogene	Gm13579	ENSMUST00000118519	processed_pseudogene		2	-1	61030970	517
ENSMUSG00000036553	protein_coding	Sh3tc1	ENSMUST00000129664	nonsense_mediated_decay		5	-1	35716251	3411
ENSMUSG00000032563	protein_coding	Mrpl3	ENSMUST00000139022	retained_intron		9	1	105070859	969
ENSMUSG00000028163	protein_coding	Nfkb1	ENSMUST00000129428	retained_intron		3	-1	135608483	2520
ENSMUSG00000081560	processed_pseudogene	Gm9218	ENSMUST00000121068	processed_pseudogene		X	1	108446389	2694
ENSMUSG00000111472	processed_pseudogene	Gm47103	ENSMUST00000213426	processed_pseudogene		9	1	105085920	1111
ENSMUSG00000026577	protein_coding	Blzf1	ENSMUST00000086032	protein_coding	principal1	1	-1	164307489	1602
ENSMUSG00000036553	protein_coding	Sh3tc1	ENSMUST00000201511	protein_coding	principal1	5	-1	35739987	4246
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000203297	retained_intron		6	1	116225972	1284
ENSMUSG00000022378	protein_coding	Fam49b	ENSMUST00000227024	protein_coding		15	-1	64060420	752
ENSMUSG00000111044	antisense	Gm47106	ENSMUST00000213142	antisense		9	-1	105088286	832
ENSMUSG00000074212	protein_coding	Dnajb14	ENSMUST00000125226	retained_intron		3	1	137867887	3564
ENSMUSG00000007610	protein_coding	Gtpbp3	ENSMUST00000007754	protein_coding	principal2	8	1	71488103	2800
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000204495	retained_intron		6	1	116255806	697
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000231099	retained_intron		15	-1	102338961	398
ENSMUSG00000113204	lincRNA	Gm46430	ENSMUST00000221389	lincRNA		13	-1	74617881	1049
ENSMUSG00000111824	processed_pseudogene	Gm47102	ENSMUST00000215114	processed_pseudogene		9	1	105087075	3107
ENSMUSG00000113204	lincRNA	Gm46430	ENSMUST00000222254	lincRNA		13	-1	74617310	1703
ENSMUSG00000022378	protein_coding	Fam49b	ENSMUST00000226675	protein_coding		15	-1	64060330	466
ENSMUSG00000024104	protein_coding	Washc2	ENSMUST00000203980	retained_intron		6	1	116256556	599
ENSMUSG00000113204	lincRNA	Gm46430	ENSMUST00000220478	lincRNA		13	-1	74617702	1989
ENSMUSG00000027936	protein_coding	Crtc2	ENSMUST00000029545	protein_coding	principal1	3	1	90254163	2747
ENSMUSG00000022378	protein_coding	Fam49b	ENSMUST00000227118	retained_intron		15	-1	63961543	5216
ENSMUSG00000113204	lincRNA	Gm46430	ENSMUST00000223059	lincRNA		13	-1	74610034	1512
ENSMUSG00000113204	lincRNA	Gm46430	ENSMUST00000220929	lincRNA		13	-1	74617310	1179
ENSMUSG00000093916	transcribed_processed_pseudogene	Gm379	ENSMUST00000238413	processed_transcript		X	-1	108664703	1773
ENSMUSG00000074212	protein_coding	Dnajb14	ENSMUST00000197711	protein_coding		3	1	137868166	635
ENSMUSG00000036553	protein_coding	Sh3tc1	ENSMUST00000151555	retained_intron		5	-1	35719238	4991
ENSMUSG00000107577	TEC	Gm44103	ENSMUST00000204364	TEC		6	-1	116264095	3662
ENSMUSG00000022324	protein_coding	Matn2	ENSMUST00000163455	protein_coding	alternative2	15	1	34306680	3577
ENSMUSG00000113204	lincRNA	Gm46430	ENSMUST00000222003	lincRNA		13	-1	74617560	1371
ENSMUSG00000041399	protein_coding	1700013G24Rik	ENSMUST00000048893	protein_coding	principal1	4	1	137453284	1048
ENSMUSG00000022378	protein_coding	Fam49b	ENSMUST00000226129	retained_intron		15	-1	64060428	2614
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000090858	protein_coding	principal1	2	1	69722805	6127
ENSMUSG00000022559	protein_coding	Fbxl6	ENSMUST00000230513	retained_intron		15	-1	76538735	1953
ENSMUSG00000113204	lincRNA	Gm46430	ENSMUST00000221506	lincRNA		13	-1	74617702	1288
ENSMUSG00000093916	transcribed_processed_pseudogene	Gm379	ENSMUST00000238618	processed_transcript		X	-1	108664455	576
ENSMUSG00000074212	protein_coding	Dnajb14	ENSMUST00000195903	retained_intron		3	1	137905230	3700
ENSMUSG00000038331	protein_coding	Satb2	ENSMUST00000042857	protein_coding		1	-1	56972502	6277
ENSMUSG00000036553	protein_coding	Sh3tc1	ENSMUST00000154118	processed_transcript		5	-1	35729012	370
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000230406	nonsense_mediated_decay		15	-1	102340000	697
ENSMUSG00000113204	lincRNA	Gm46430	ENSMUST00000222430	lincRNA		13	-1	74617945	736
ENSMUSG00000022559	protein_coding	Fbxl6	ENSMUST00000229813	retained_intron		15	-1	76538746	2091
ENSMUSG00000026577	protein_coding	Blzf1	ENSMUST00000124007	processed_transcript		1	-1	164307272	921
ENSMUSG00000105748	TEC	Gm43088	ENSMUST00000197530	TEC		3	1	137897144	2347
ENSMUSG00000115102	TEC	Gm49270	ENSMUST00000226995	TEC		14	1	31511348	804
ENSMUSG00000113204	lincRNA	Gm46430	ENSMUST00000222377	lincRNA		13	-1	74617945	631
ENSMUSG00000026577	protein_coding	Blzf1	ENSMUST00000148884	retained_intron		1	-1	164307471	1640
ENSMUSG00000118411	unprocessed_pseudogene	Gm50456	ENSMUST00000238688	unprocessed_pseudogene		15	1	9475502	101
ENSMUSG00000113204	lincRNA	Gm46430	ENSMUST00000222064	lincRNA		13	-1	74617238	1647
ENSMUSG00000032565	protein_coding	Nudt16	ENSMUST00000185533	protein_coding		9	-1	105131312	339
ENSMUSG00000022559	protein_coding	Fbxl6	ENSMUST00000230938	processed_transcript		15	-1	76538456	570
ENSMUSG00000094447	protein_coding	9430069I07Rik	ENSMUST00000227772	protein_coding	principal1	15	-1	34357872	572
ENSMUSG00000029062	protein_coding	Cdk11b	ENSMUST00000067081	protein_coding	principal3	4	1	155624869	2595
ENSMUSG00000103493	TEC	Gm37411	ENSMUST00000194180	TEC		1	1	164424713	2282
ENSMUSG00000022559	protein_coding	Fbxl6	ENSMUST00000228994	retained_intron		15	-1	76538136	586
ENSMUSG00000020867	protein_coding	Spata20	ENSMUST00000041705	protein_coding	principal1	11	-1	94485348	2627
ENSMUSG00000093916	transcribed_processed_pseudogene	Gm379	ENSMUST00000178160	transcribed_processed_pseudogene		X	-1	108664891	894
ENSMUSG00000028163	protein_coding	Nfkb1	ENSMUST00000196469	nonsense_mediated_decay		3	-1	135669339	3084
ENSMUSG00000094447	protein_coding	9430069I07Rik	ENSMUST00000179647	protein_coding	principal1	15	-1	34356421	336
ENSMUSG00000083197	processed_pseudogene	Gm13581	ENSMUST00000120675	processed_pseudogene		2	1	61224792	278
ENSMUSG00000022559	protein_coding	Fbxl6	ENSMUST00000229273	retained_intron		15	-1	76537986	336
ENSMUSG00000028163	protein_coding	Nfkb1	ENSMUST00000150007	processed_transcript		3	-1	135594441	528
ENSMUSG00000115907	lincRNA	Gm49432	ENSMUST00000229709	lincRNA		16	-1	13739204	301
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000229589	retained_intron		15	-1	102350695	1814
ENSMUSG00000028163	protein_coding	Nfkb1	ENSMUST00000199588	retained_intron		3	-1	135603859	2001
ENSMUSG00000007610	protein_coding	Gtpbp3	ENSMUST00000095259	nonsense_mediated_decay		8	1	71488721	2109
ENSMUSG00000043263	protein_coding	Ifi209	ENSMUST00000056071	protein_coding	principal1	1	1	173630917	3439
ENSMUSG00000029062	protein_coding	Cdk11b	ENSMUST00000149498	processed_transcript		4	1	155624880	383
ENSMUSG00000080951	processed_pseudogene	Gm12208	ENSMUST00000122004	processed_pseudogene		11	1	52405316	163
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000228959	protein_coding		15	-1	102338881	314
ENSMUSG00000086550	antisense	Pla2g10os	ENSMUST00000141172	antisense		16	1	13729836	331
ENSMUSG00000029062	protein_coding	Cdk11b	ENSMUST00000105600	protein_coding	principal3	4	1	155624883	3170
ENSMUSG00000007610	protein_coding	Gtpbp3	ENSMUST00000150969	nonsense_mediated_decay		8	1	71488728	2052
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000230239	protein_coding		15	-1	102340028	440
ENSMUSG00000007610	protein_coding	Gtpbp3	ENSMUST00000132907	retained_intron		8	1	71488734	615
ENSMUSG00000029062	protein_coding	Cdk11b	ENSMUST00000105598	protein_coding	alternative2	4	1	155624910	2673
ENSMUSG00000043263	protein_coding	Ifi209	ENSMUST00000193727	nonsense_mediated_decay		1	1	173631025	1594
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000230481	nonsense_mediated_decay		15	-1	102350080	898
ENSMUSG00000068011	protein_coding	Mkrn2os	ENSMUST00000088962	nonsense_mediated_decay		6	-1	115592549	2465
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000184265	protein_coding		2	-1	156111935	871
ENSMUSG00000028163	protein_coding	Nfkb1	ENSMUST00000138602	retained_intron		3	-1	135691547	3383
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000229900	nonsense_mediated_decay		15	-1	102350080	781
ENSMUSG00000017737	protein_coding	Mmp9	ENSMUST00000137626	protein_coding		2	1	164940780	416
ENSMUSG00000007610	protein_coding	Gtpbp3	ENSMUST00000124349	retained_intron		8	1	71488743	2830
ENSMUSG00000029062	protein_coding	Cdk11b	ENSMUST00000142513	processed_transcript		4	1	155634168	411
ENSMUSG00000028163	protein_coding	Nfkb1	ENSMUST00000196246	retained_intron		3	-1	135622142	4149
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000230710	retained_intron		15	-1	102350265	959
ENSMUSG00000032565	protein_coding	Nudt16	ENSMUST00000035179	protein_coding	principal1	9	-1	105131824	1631
ENSMUSG00000020867	protein_coding	Spata20	ENSMUST00000134332	processed_transcript		11	-1	94485101	2587
ENSMUSG00000116284	transcribed_processed_pseudogene	Gm3787	ENSMUST00000229296	processed_transcript		15	-1	77371010	669
ENSMUSG00000007610	protein_coding	Gtpbp3	ENSMUST00000127741	nonsense_mediated_decay		8	1	71488751	2392
ENSMUSG00000116284	transcribed_processed_pseudogene	Gm3787	ENSMUST00000230638	transcribed_processed_pseudogene		15	-1	77370282	132
ENSMUSG00000029062	protein_coding	Cdk11b	ENSMUST00000155100	processed_transcript		4	1	155647203	631
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000231061	protein_coding		15	-1	102350746	1025
ENSMUSG00000038331	protein_coding	Satb2	ENSMUST00000114415	protein_coding	principal1	1	-1	56971858	5805
ENSMUSG00000020867	protein_coding	Spata20	ENSMUST00000125310	processed_transcript		11	-1	94486179	401
ENSMUSG00000028163	protein_coding	Nfkb1	ENSMUST00000164430	protein_coding	principal1	3	-1	135667799	3007
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000229315	processed_transcript		15	-1	102350771	1021
ENSMUSG00000029062	protein_coding	Cdk11b	ENSMUST00000143196	processed_transcript		4	1	155647368	411
ENSMUSG00000020867	protein_coding	Spata20	ENSMUST00000151707	processed_transcript		11	-1	94484412	538
ENSMUSG00000043445	protein_coding	Pgp	ENSMUST00000053024	protein_coding	principal1	17	1	24470392	2627
ENSMUSG00000067578	protein_coding	Cbln4	ENSMUST00000087950	protein_coding	principal1	2	-1	172043466	2902
ENSMUSG00000020867	protein_coding	Spata20	ENSMUST00000136362	processed_transcript		11	-1	94485099	811
ENSMUSG00000007610	protein_coding	Gtpbp3	ENSMUST00000146551	retained_intron		8	1	71489459	678
ENSMUSG00000022683	protein_coding	Pla2g10	ENSMUST00000115807	protein_coding		16	-1	13730443	964
ENSMUSG00000036678	protein_coding	Aaas	ENSMUST00000230349	retained_intron		15	-1	102350687	473
ENSMUSG00000032565	protein_coding	Nudt16	ENSMUST00000190375	retained_intron		9	-1	105131780	1326
ENSMUSG00000038331	protein_coding	Satb2	ENSMUST00000177424	protein_coding		1	-1	56969872	4694
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000124810	processed_transcript		2	1	69722854	598
ENSMUSG00000043445	protein_coding	Pgp	ENSMUST00000234216	retained_intron		17	1	24470435	2428
ENSMUSG00000032565	protein_coding	Nudt16	ENSMUST00000186933	retained_intron		9	-1	105131819	2147
ENSMUSG00000068011	protein_coding	Mkrn2os	ENSMUST00000112957	protein_coding	principal1	6	-1	115592576	964
ENSMUSG00000066677	protein_coding	Ifi208	ENSMUST00000182880	retained_intron		1	1	173673675	2947
ENSMUSG00000007610	protein_coding	Gtpbp3	ENSMUST00000168847	protein_coding	alternative2	8	1	71488103	2803
ENSMUSG00000038331	protein_coding	Satb2	ENSMUST00000176759	protein_coding		1	-1	56969840	331
ENSMUSG00000087409	antisense	Gm14271	ENSMUST00000137886	antisense		2	1	172046526	630
ENSMUSG00000032565	protein_coding	Nudt16	ENSMUST00000186925	protein_coding		9	-1	105131773	699
ENSMUSG00000083793	processed_pseudogene	Gm14274	ENSMUST00000117182	processed_pseudogene		2	1	172100621	615
ENSMUSG00000038331	protein_coding	Satb2	ENSMUST00000177282	protein_coding		1	-1	56978650	454
ENSMUSG00000066677	protein_coding	Ifi208	ENSMUST00000085876	protein_coding	principal1	1	1	173673680	2990
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000142975	retained_intron		2	-1	156111888	3466
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000125105	processed_transcript		2	1	69722903	300
ENSMUSG00000066677	protein_coding	Ifi208	ENSMUST00000169857	protein_coding	principal1	1	1	173677686	1767
ENSMUSG00000022683	protein_coding	Pla2g10	ENSMUST00000023364	protein_coding	principal1	16	-1	13730983	1423
ENSMUSG00000036275	protein_coding	9530068E07Rik	ENSMUST00000109057	protein_coding	alternative2	11	1	52396428	2472
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000040915	protein_coding	principal1	2	1	69723093	6245
ENSMUSG00000038537	protein_coding	Mc3r	ENSMUST00000038532	protein_coding	principal1	2	1	172248492	2623
ENSMUSG00000022683	protein_coding	Pla2g10	ENSMUST00000127780	processed_transcript		16	-1	13730719	498
ENSMUSG00000036275	protein_coding	9530068E07Rik	ENSMUST00000153855	processed_transcript		11	1	52396428	1373
ENSMUSG00000022683	protein_coding	Pla2g10	ENSMUST00000156504	processed_transcript		16	-1	13730679	369
ENSMUSG00000036275	protein_coding	9530068E07Rik	ENSMUST00000136303	processed_transcript		11	1	52396646	368
ENSMUSG00000034845	protein_coding	Plvap	ENSMUST00000048452	protein_coding	principal1	8	-1	71511752	1987
ENSMUSG00000085949	lincRNA	Gm14275	ENSMUST00000152112	lincRNA		2	1	172288133	430
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000146234	processed_transcript		2	1	69723326	801
ENSMUSG00000000214	protein_coding	Th	ENSMUST00000000219	protein_coding	principal1	7	-1	142900014	1829
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000144652	protein_coding		2	1	69729192	658
ENSMUSG00000036275	protein_coding	9530068E07Rik	ENSMUST00000036952	protein_coding	principal2	11	1	52396428	2467
ENSMUSG00000000214	protein_coding	Th	ENSMUST00000105929	protein_coding		7	-1	142931128	1950
ENSMUSG00000032566	protein_coding	Nudt16l2	ENSMUST00000035180	protein_coding	principal1	9	-1	105145092	883
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000134424	processed_transcript		2	1	69731808	548
ENSMUSG00000000214	protein_coding	Th	ENSMUST00000124951	nonsense_mediated_decay		7	-1	142899961	1280
ENSMUSG00000000214	protein_coding	Th	ENSMUST00000138482	nonsense_mediated_decay		7	-1	142896609	483
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000203652	protein_coding	principal3	6	1	42349828	2605
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000142839	processed_transcript		2	1	69732056	583
ENSMUSG00000022964	protein_coding	Tmem50b	ENSMUST00000023686	protein_coding	principal1	16	-1	91597800	2347
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000134500	processed_transcript		2	1	69732225	794
ENSMUSG00000036499	protein_coding	Eea1	ENSMUST00000053484	protein_coding	principal1	10	1	95940750	7749
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000070635	protein_coding	alternative2	6	1	42349869	2301
ENSMUSG00000032566	protein_coding	Nudt16l2	ENSMUST00000190661	protein_coding		9	-1	105145076	682
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000128506	processed_transcript		2	1	69735738	428
ENSMUSG00000026576	protein_coding	Atp1b1	ENSMUST00000027863	protein_coding	principal1	1	-1	164458355	2580
ENSMUSG00000042608	protein_coding	Stk40	ENSMUST00000094761	protein_coding	principal1	4	1	126103972	3492
ENSMUSG00000042133	protein_coding	Ppig	ENSMUST00000143954	processed_transcript		2	1	69741669	675
ENSMUSG00000022964	protein_coding	Tmem50b	ENSMUST00000133180	nonsense_mediated_decay		16	-1	91597664	775
ENSMUSG00000036499	protein_coding	Eea1	ENSMUST00000218517	nonsense_mediated_decay		10	1	95940757	1251
ENSMUSG00000081478	unprocessed_pseudogene	AA623943	ENSMUST00000121794	unprocessed_pseudogene		11	-1	94813348	354
ENSMUSG00000000214	protein_coding	Th	ENSMUST00000123057	nonsense_mediated_decay		7	-1	142899966	990
ENSMUSG00000022964	protein_coding	Tmem50b	ENSMUST00000141885	nonsense_mediated_decay		16	-1	91597800	732
ENSMUSG00000026576	protein_coding	Atp1b1	ENSMUST00000193980	processed_transcript		1	-1	164443719	453
ENSMUSG00000114919	processed_pseudogene	Gm6122	ENSMUST00000225025	processed_pseudogene		14	-1	19291209	679
ENSMUSG00000000214	protein_coding	Th	ENSMUST00000140344	protein_coding		7	-1	142931120	1012
ENSMUSG00000027936	protein_coding	Crtc2	ENSMUST00000149422	retained_intron		3	1	90254296	2992
ENSMUSG00000081007	unprocessed_pseudogene	Gm11543	ENSMUST00000120758	unprocessed_pseudogene		11	-1	94828930	370
ENSMUSG00000097929	protein_coding	Tunar	ENSMUST00000222718	processed_transcript		12	1	105333870	3219
ENSMUSG00000026576	protein_coding	Atp1b1	ENSMUST00000193367	protein_coding		1	-1	164453777	628
ENSMUSG00000107123	unprocessed_pseudogene	Vmn2r-ps25	ENSMUST00000202322	unprocessed_pseudogene		5	-1	151461865	2321
ENSMUSG00000107949	TEC	Gm44157	ENSMUST00000204720	TEC		6	1	115608170	410
ENSMUSG00000026576	protein_coding	Atp1b1	ENSMUST00000192522	retained_intron		1	-1	164458022	618
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000203290	retained_intron		6	1	42350033	3076
ENSMUSG00000081586	unprocessed_pseudogene	Gm11544	ENSMUST00000120215	unprocessed_pseudogene		11	-1	94846092	382
ENSMUSG00000097929	protein_coding	Tunar	ENSMUST00000180458	protein_coding	principal1	12	1	105336594	3282
ENSMUSG00000094240	processed_pseudogene	Gm14348	ENSMUST00000179183	processed_pseudogene		X	-1	4294991	868
ENSMUSG00000043522	unprocessed_pseudogene	A430060F13Rik	ENSMUST00000124176	unprocessed_pseudogene		11	-1	94861759	378
ENSMUSG00000028391	protein_coding	Wdr31	ENSMUST00000146108	processed_transcript		4	-1	62468888	2128
ENSMUSG00000097929	protein_coding	Tunar	ENSMUST00000180503	nonsense_mediated_decay		12	1	105336993	2876
ENSMUSG00000042608	protein_coding	Stk40	ENSMUST00000139524	protein_coding		4	1	126104001	362
ENSMUSG00000114877	unprocessed_pseudogene	Gm33022	ENSMUST00000224681	unprocessed_pseudogene		14	-1	19292529	368
ENSMUSG00000085775	processed_pseudogene	Gm14364	ENSMUST00000129209	processed_pseudogene		X	1	4339453	267
ENSMUSG00000063225	protein_coding	Olfr917	ENSMUST00000076542	protein_coding	principal1	9	-1	38665842	930
ENSMUSG00000114252	processed_pseudogene	Gm5630	ENSMUST00000223777	processed_pseudogene		14	-1	19351647	900
ENSMUSG00000027936	protein_coding	Crtc2	ENSMUST00000130002	retained_intron		3	1	90254296	2278
ENSMUSG00000042608	protein_coding	Stk40	ENSMUST00000127092	processed_transcript		4	1	126104035	347
ENSMUSG00000093814	processed_pseudogene	Gm9637	ENSMUST00000179141	processed_pseudogene		14	-1	19402599	873
ENSMUSG00000106703	unprocessed_pseudogene	Vmn2r-ps26	ENSMUST00000202039	unprocessed_pseudogene		5	-1	151549267	2111
ENSMUSG00000042608	protein_coding	Stk40	ENSMUST00000139188	protein_coding		4	1	126118272	691
ENSMUSG00000027936	protein_coding	Crtc2	ENSMUST00000123964	retained_intron		3	1	90254324	623
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000203401	protein_coding	alternative2	6	1	42350033	1954
ENSMUSG00000085966	processed_pseudogene	Gm14368	ENSMUST00000145305	processed_pseudogene		X	-1	4343915	415
ENSMUSG00000027936	protein_coding	Crtc2	ENSMUST00000136970	processed_transcript		3	1	90254341	2214
ENSMUSG00000035580	protein_coding	Kcnh8	ENSMUST00000039366	protein_coding	principal1	17	1	52602709	4287
ENSMUSG00000042608	protein_coding	Stk40	ENSMUST00000134369	processed_transcript		4	1	126128819	413
ENSMUSG00000095411	processed_pseudogene	Gm15260	ENSMUST00000179402	processed_pseudogene		X	1	4366897	883
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000203626	processed_transcript		6	1	42350038	729
ENSMUSG00000023828	protein_coding	Slc22a3	ENSMUST00000233535	nonsense_mediated_decay		17	-1	12507416	4127
ENSMUSG00000116784	processed_pseudogene	Gm49716	ENSMUST00000232093	processed_pseudogene		16	-1	92189503	442
ENSMUSG00000027936	protein_coding	Crtc2	ENSMUST00000184882	nonsense_mediated_decay		3	1	90257295	2311
ENSMUSG00000027936	protein_coding	Crtc2	ENSMUST00000135002	retained_intron		3	1	90258051	652
ENSMUSG00000042608	protein_coding	Stk40	ENSMUST00000116286	protein_coding		4	1	126103957	3860
ENSMUSG00000081182	processed_pseudogene	Gm14935	ENSMUST00000121528	processed_pseudogene		X	1	96548629	1708
ENSMUSG00000027936	protein_coding	Crtc2	ENSMUST00000149897	retained_intron		3	1	90258965	869
ENSMUSG00000035580	protein_coding	Kcnh8	ENSMUST00000184279	retained_intron		17	1	52950060	1606
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000164375	protein_coding	principal3	6	1	42350039	3188
ENSMUSG00000010051	protein_coding	Hyal1	ENSMUST00000112387	protein_coding	alternative2	9	1	107576927	2706
ENSMUSG00000117289	bidirectional_promoter_lncRNA	1700093J21Rik	ENSMUST00000233171	bidirectional_promoter_lncRNA		16	1	96082676	647
ENSMUSG00000082317	processed_pseudogene	Gm14933	ENSMUST00000118840	processed_pseudogene		X	-1	96359681	481
ENSMUSG00000010051	protein_coding	Hyal1	ENSMUST00000123005	protein_coding		9	1	107576938	843
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000203849	protein_coding		6	1	42350071	525
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000204270	processed_transcript		6	1	42353478	344
ENSMUSG00000094273	protein_coding	Btbd35f17	ENSMUST00000105014	protein_coding	principal1	X	1	4370636	1960
ENSMUSG00000103105	transcribed_unprocessed_pseudogene	Gm18752	ENSMUST00000192876	transcribed_unprocessed_pseudogene		1	1	173701385	608
ENSMUSG00000054206	protein_coding	Gzmm	ENSMUST00000020549	protein_coding	principal1	10	1	79689020	1287
ENSMUSG00000029860	protein_coding	Zyx	ENSMUST00000204480	processed_transcript		6	1	42355137	351
ENSMUSG00000103105	transcribed_unprocessed_pseudogene	Gm18752	ENSMUST00000193627	processed_transcript		1	1	173701715	587
ENSMUSG00000094794	processed_pseudogene	Gm6019	ENSMUST00000148369	processed_pseudogene		X	-1	4410246	736
ENSMUSG00000117244	processed_pseudogene	Gm9210	ENSMUST00000233156	processed_pseudogene		17	1	53196451	1603
ENSMUSG00000054206	protein_coding	Gzmm	ENSMUST00000151213	processed_transcript		10	1	79693758	865
ENSMUSG00000103051	unprocessed_pseudogene	Gm7871	ENSMUST00000195346	unprocessed_pseudogene		1	-1	173715660	618
ENSMUSG00000010051	protein_coding	Hyal1	ENSMUST00000010195	protein_coding	principal2	9	1	107576958	3014
ENSMUSG00000101268	antisense	2010310C07Rik	ENSMUST00000190889	antisense		6	1	42370671	842
ENSMUSG00000051319	protein_coding	Mtln	ENSMUST00000135091	protein_coding	principal1	2	-1	127792488	800
ENSMUSG00000117194	processed_pseudogene	Gm49913	ENSMUST00000233695	processed_pseudogene		17	1	53245963	379
ENSMUSG00000117089	processed_pseudogene	Gm49914	ENSMUST00000233402	processed_pseudogene		17	-1	53304407	420
ENSMUSG00000101268	antisense	2010310C07Rik	ENSMUST00000187172	antisense		6	1	42377956	2226
ENSMUSG00000010051	protein_coding	Hyal1	ENSMUST00000144392	protein_coding		9	1	107576990	1332
ENSMUSG00000117248	processed_pseudogene	Gm29770	ENSMUST00000233251	processed_pseudogene		17	1	53354512	310
ENSMUSG00000117270	lincRNA	Gm49953	ENSMUST00000232779	lincRNA		16	1	96097204	1130
ENSMUSG00000010051	protein_coding	Hyal1	ENSMUST00000184695	retained_intron		9	1	107579597	2078
ENSMUSG00000108033	antisense	Gm44284	ENSMUST00000203836	antisense		6	-1	42350862	3444
ENSMUSG00000117241	processed_pseudogene	Gm9214	ENSMUST00000232913	processed_pseudogene		17	1	53359927	1963
ENSMUSG00000117270	lincRNA	Gm49953	ENSMUST00000233834	lincRNA		16	1	96097205	966
ENSMUSG00000060180	protein_coding	Myh13	ENSMUST00000108684	protein_coding	principal1	11	1	67321658	6062
ENSMUSG00000117270	lincRNA	Gm49953	ENSMUST00000233230	lincRNA		16	1	96097205	903
ENSMUSG00000117270	lincRNA	Gm49953	ENSMUST00000233851	lincRNA		16	1	96097205	898
ENSMUSG00000117270	lincRNA	Gm49953	ENSMUST00000233380	lincRNA		16	1	96098115	1121
ENSMUSG00000060180	protein_coding	Myh13	ENSMUST00000180845	protein_coding	principal1	11	1	67321780	5991
ENSMUSG00000117270	lincRNA	Gm49953	ENSMUST00000233125	lincRNA		16	1	96098146	1152
ENSMUSG00000117270	lincRNA	Gm49953	ENSMUST00000233464	lincRNA		16	1	96098354	1076
ENSMUSG00000023828	protein_coding	Slc22a3	ENSMUST00000024595	protein_coding	principal1	17	-1	12507704	3504
ENSMUSG00000060180	protein_coding	Myh13	ENSMUST00000181027	protein_coding		11	1	67364785	668
ENSMUSG00000090243	processed_pseudogene	Gm16103	ENSMUST00000163003	processed_pseudogene		1	1	43785910	1279
ENSMUSG00000028868	protein_coding	Wasf2	ENSMUST00000084241	protein_coding	principal1	4	1	133130505	5642
ENSMUSG00000093458	sense_intronic	Gm20688	ENSMUST00000176779	sense_intronic		15	-1	77392381	512
ENSMUSG00000060180	protein_coding	Myh13	ENSMUST00000081911	protein_coding	principal1	11	1	67327103	5817
ENSMUSG00000028868	protein_coding	Wasf2	ENSMUST00000105912	protein_coding	principal1	4	1	133176371	2236
ENSMUSG00000028868	protein_coding	Wasf2	ENSMUST00000138831	protein_coding		4	1	133130540	483
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000130528	retained_intron		6	-1	115634621	3968
ENSMUSG00000028868	protein_coding	Wasf2	ENSMUST00000136132	processed_transcript		4	1	133130629	365
ENSMUSG00000028868	protein_coding	Wasf2	ENSMUST00000123578	processed_transcript		4	1	133176001	223
ENSMUSG00000036091	protein_coding	Hyal3	ENSMUST00000148440	protein_coding	principal1	9	1	107580818	1380
ENSMUSG00000028868	protein_coding	Wasf2	ENSMUST00000136637	processed_transcript		4	1	133189018	599
ENSMUSG00000025825	protein_coding	Iscu	ENSMUST00000026937	protein_coding	principal1	5	1	113772748	957
ENSMUSG00000037820	protein_coding	Tgm2	ENSMUST00000103122	protein_coding	principal1	2	-1	158146436	3596
ENSMUSG00000114518	processed_pseudogene	Gm48208	ENSMUST00000224120	processed_pseudogene		13	-1	105569963	1210
ENSMUSG00000114671	processed_pseudogene	Gm48211	ENSMUST00000225365	processed_pseudogene		13	-1	105833678	226
ENSMUSG00000022095	protein_coding	Fam160b2	ENSMUST00000022690	protein_coding	principal1	14	-1	70599835	4033
ENSMUSG00000037820	protein_coding	Tgm2	ENSMUST00000174718	nonsense_mediated_decay		2	-1	158146393	748
ENSMUSG00000036091	protein_coding	Hyal3	ENSMUST00000040059	protein_coding	principal1	9	1	107581296	1830
ENSMUSG00000042202	protein_coding	Slc35e2	ENSMUST00000105608	protein_coding	principal1	4	1	155601416	6291
ENSMUSG00000114564	lincRNA	Gm10739	ENSMUST00000223900	lincRNA		13	1	105838547	1328
ENSMUSG00000114840	processed_pseudogene	Gm48212	ENSMUST00000225531	processed_pseudogene		13	1	105901764	377
ENSMUSG00000114899	processed_pseudogene	Gm48214	ENSMUST00000224697	processed_pseudogene		13	1	106042124	358
ENSMUSG00000025825	protein_coding	Iscu	ENSMUST00000112311	protein_coding		5	1	113772803	1395
ENSMUSG00000085905	antisense	Gm14273	ENSMUST00000136315	antisense		2	1	172324334	1786
ENSMUSG00000036091	protein_coding	Hyal3	ENSMUST00000149487	protein_coding		9	1	107584752	1001
ENSMUSG00000042202	protein_coding	Slc35e2	ENSMUST00000043829	protein_coding	principal1	4	1	155601611	2910
ENSMUSG00000020887	TEC	A230052G05Rik	ENSMUST00000050921	TEC		8	1	70863127	2302
ENSMUSG00000069520	protein_coding	Tmem19	ENSMUST00000218731	protein_coding		10	-1	115362231	1346
ENSMUSG00000037820	protein_coding	Tgm2	ENSMUST00000140923	retained_intron		2	-1	158146366	1876
ENSMUSG00000037820	protein_coding	Tgm2	ENSMUST00000152690	processed_transcript		2	-1	158139736	352
ENSMUSG00000100860	antisense	2010009K17Rik	ENSMUST00000186977	antisense		2	-1	158091797	567
ENSMUSG00000025825	protein_coding	Iscu	ENSMUST00000112312	protein_coding		5	1	113772803	1116
ENSMUSG00000042202	protein_coding	Slc35e2	ENSMUST00000118607	protein_coding	principal1	4	1	155601944	2166
ENSMUSG00000010601	protein_coding	Apol7a	ENSMUST00000176074	protein_coding	principal1	15	-1	77399110	2390
ENSMUSG00000042202	protein_coding	Slc35e2	ENSMUST00000151425	processed_transcript		4	1	155610203	654
ENSMUSG00000020230	protein_coding	Prmt2	ENSMUST00000020452	protein_coding	principal3	10	-1	76237837	2016
ENSMUSG00000010601	protein_coding	Apol7a	ENSMUST00000175919	protein_coding	principal1	15	-1	77399086	2263
ENSMUSG00000086682	processed_transcript	Gm16023	ENSMUST00000137752	processed_transcript		4	-1	155624755	2490
ENSMUSG00000025825	protein_coding	Iscu	ENSMUST00000123616	nonsense_mediated_decay		5	1	113772818	773
ENSMUSG00000086682	processed_transcript	Gm16023	ENSMUST00000154931	processed_transcript		4	-1	155624480	402
ENSMUSG00000027495	protein_coding	Fam210b	ENSMUST00000028995	protein_coding	principal1	2	1	172345565	3617
ENSMUSG00000010601	protein_coding	Apol7a	ENSMUST00000177135	retained_intron		15	-1	77396934	817
ENSMUSG00000025825	protein_coding	Iscu	ENSMUST00000145778	protein_coding		5	1	113773005	388
ENSMUSG00000010601	protein_coding	Apol7a	ENSMUST00000175789	protein_coding		15	-1	77398451	344
ENSMUSG00000028617	protein_coding	Lrrc42	ENSMUST00000030360	protein_coding	principal1	4	-1	107253532	1755
ENSMUSG00000025825	protein_coding	Iscu	ENSMUST00000134881	nonsense_mediated_decay		5	1	113773025	489
ENSMUSG00000079334	protein_coding	Naa80	ENSMUST00000149638	protein_coding		9	1	107578887	1233
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000152713	protein_coding		2	1	26580014	367
ENSMUSG00000025825	protein_coding	Iscu	ENSMUST00000145592	protein_coding		5	1	113773847	431
ENSMUSG00000079334	protein_coding	Naa80	ENSMUST00000139274	protein_coding		9	1	107578887	2304
ENSMUSG00000010601	protein_coding	Apol7a	ENSMUST00000010745	protein_coding	principal1	15	-1	77396458	1431
ENSMUSG00000086347	antisense	Gm11626	ENSMUST00000142107	antisense		11	-1	101457390	333
ENSMUSG00000028617	protein_coding	Lrrc42	ENSMUST00000137837	retained_intron		4	-1	107243527	1195
ENSMUSG00000028617	protein_coding	Lrrc42	ENSMUST00000142657	retained_intron		4	-1	107235980	407
ENSMUSG00000028617	protein_coding	Lrrc42	ENSMUST00000144176	protein_coding		4	-1	107239753	344
ENSMUSG00000028617	protein_coding	Lrrc42	ENSMUST00000156771	protein_coding		4	-1	107253160	411
ENSMUSG00000017737	protein_coding	Mmp9	ENSMUST00000017881	protein_coding	principal1	2	1	164948219	3175
ENSMUSG00000079334	protein_coding	Naa80	ENSMUST00000130053	protein_coding		9	1	107578887	1073
ENSMUSG00000079334	protein_coding	Naa80	ENSMUST00000122985	protein_coding		9	1	107578887	2623
ENSMUSG00000079334	protein_coding	Naa80	ENSMUST00000127380	protein_coding		9	1	107578887	787
ENSMUSG00000079334	protein_coding	Naa80	ENSMUST00000139581	protein_coding		9	1	107578887	1552
ENSMUSG00000017737	protein_coding	Mmp9	ENSMUST00000134382	retained_intron		2	1	164950696	462
ENSMUSG00000085742	antisense	Gm13536	ENSMUST00000132913	antisense		2	1	33446802	766
ENSMUSG00000045802	protein_coding	Hsf3	ENSMUST00000119035	protein_coding		X	-1	96456294	2691
ENSMUSG00000020230	protein_coding	Prmt2	ENSMUST00000128099	nonsense_mediated_decay		10	-1	76237830	2066
ENSMUSG00000017737	protein_coding	Mmp9	ENSMUST00000144917	processed_transcript		2	1	164954386	1125
ENSMUSG00000082549	processed_pseudogene	Gm14813	ENSMUST00000122291	processed_pseudogene		X	-1	98962478	395
ENSMUSG00000070385	protein_coding	Ampd1	ENSMUST00000090715	protein_coding	principal1	3	1	103074014	2342
ENSMUSG00000045802	protein_coding	Hsf3	ENSMUST00000164693	protein_coding		X	-1	96456283	2076
ENSMUSG00000104675	lincRNA	Gm43689	ENSMUST00000195951	lincRNA		3	-1	137918445	427
ENSMUSG00000070385	protein_coding	Ampd1	ENSMUST00000155034	protein_coding		3	1	103074022	2913
ENSMUSG00000045802	protein_coding	Hsf3	ENSMUST00000059003	protein_coding	principal1	X	-1	96367919	1479
ENSMUSG00000070385	protein_coding	Ampd1	ENSMUST00000176440	protein_coding		3	1	103074053	579
ENSMUSG00000020849	protein_coding	Ywhae	ENSMUST00000067664	protein_coding	principal1	11	1	75732869	2100
ENSMUSG00000070385	protein_coding	Ampd1	ENSMUST00000199407	retained_intron		3	1	103093779	841
ENSMUSG00000079334	protein_coding	Naa80	ENSMUST00000093785	protein_coding	principal1	9	1	107580117	2053
ENSMUSG00000045802	protein_coding	Hsf3	ENSMUST00000146965	retained_intron		X	-1	96338718	625
ENSMUSG00000070385	protein_coding	Ampd1	ENSMUST00000177250	protein_coding		3	1	103094450	751
ENSMUSG00000105731	sense_intronic	Gm43063	ENSMUST00000198198	sense_intronic		3	1	103096746	1081
ENSMUSG00000111031	processed_pseudogene	Gm47458	ENSMUST00000213750	processed_pseudogene		9	-1	38669059	424
ENSMUSG00000020849	protein_coding	Ywhae	ENSMUST00000134745	nonsense_mediated_decay		11	1	75732913	599
ENSMUSG00000089935	antisense	Gm16343	ENSMUST00000162027	antisense		9	-1	107587425	410
ENSMUSG00000043827	protein_coding	Olfr94	ENSMUST00000222190	protein_coding	alternative2	17	-1	37200994	1611
ENSMUSG00000020230	protein_coding	Prmt2	ENSMUST00000099572	protein_coding	alternative2	10	-1	76237836	2100
ENSMUSG00000116402	bidirectional_promoter_lncRNA	Gm36246	ENSMUST00000229977	bidirectional_promoter_lncRNA		15	1	102350827	452
ENSMUSG00000043827	protein_coding	Olfr94	ENSMUST00000208047	processed_transcript		17	-1	37198011	1305
ENSMUSG00000020849	protein_coding	Ywhae	ENSMUST00000153038	retained_intron		11	1	75732961	738
ENSMUSG00000045802	protein_coding	Hsf3	ENSMUST00000179832	protein_coding		X	-1	96357240	1972
ENSMUSG00000043827	protein_coding	Olfr94	ENSMUST00000055324	protein_coding	principal2	17	-1	37198011	1304
ENSMUSG00000102764	TEC	Gm37183	ENSMUST00000191712	TEC		14	-1	64839259	3405
ENSMUSG00000114686	processed_pseudogene	Gm4573	ENSMUST00000224989	processed_pseudogene		14	1	64921821	265
ENSMUSG00000020230	protein_coding	Prmt2	ENSMUST00000137857	nonsense_mediated_decay		10	-1	76237857	1967
ENSMUSG00000020849	protein_coding	Ywhae	ENSMUST00000131398	protein_coding		11	1	75733148	461
ENSMUSG00000059481	protein_coding	Plg	ENSMUST00000014578	protein_coding	principal1	17	1	12378608	2757
ENSMUSG00000020230	protein_coding	Prmt2	ENSMUST00000144670	retained_intron		10	-1	76210863	769
ENSMUSG00000046150	protein_coding	Olfr918	ENSMUST00000215461	protein_coding	alternative2	9	-1	38674601	3783
ENSMUSG00000020849	protein_coding	Ywhae	ENSMUST00000155057	retained_intron		11	1	75751604	815
ENSMUSG00000046150	protein_coding	Olfr918	ENSMUST00000216579	processed_transcript		9	-1	38674601	3712
ENSMUSG00000046150	protein_coding	Olfr918	ENSMUST00000055099	protein_coding	principal2	9	-1	38673481	978
ENSMUSG00000020230	protein_coding	Prmt2	ENSMUST00000128048	processed_transcript		10	-1	76211549	608
ENSMUSG00000070458	protein_coding	Vmn2r73	ENSMUST00000077478	protein_coding	principal2	7	-1	85876266	9758
ENSMUSG00000086961	antisense	Gm12946	ENSMUST00000122969	antisense		4	1	126145979	519
ENSMUSG00000020230	protein_coding	Prmt2	ENSMUST00000220116	retained_intron		10	-1	76217755	751
ENSMUSG00000059481	protein_coding	Plg	ENSMUST00000232767	retained_intron		17	1	12378659	1510
ENSMUSG00000117314	antisense	C030013G03Rik	ENSMUST00000233194	antisense		17	1	12466844	963
ENSMUSG00000070458	protein_coding	Vmn2r73	ENSMUST00000233729	protein_coding	alternative2	7	-1	85876266	9695
ENSMUSG00000020230	protein_coding	Prmt2	ENSMUST00000217726	nonsense_mediated_decay		10	-1	76237812	725
ENSMUSG00000049561	protein_coding	Olfr95	ENSMUST00000060728	protein_coding	principal1	17	-1	37213078	5129
ENSMUSG00000070458	protein_coding	Vmn2r73	ENSMUST00000233079	protein_coding	alternative2	7	-1	85876266	9530
ENSMUSG00000070458	protein_coding	Vmn2r73	ENSMUST00000233315	protein_coding	alternative2	7	-1	85876266	9467
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000120267	protein_coding	principal2	7	-1	101302088	6459
ENSMUSG00000117314	antisense	C030013G03Rik	ENSMUST00000233410	antisense		17	1	12466920	442
ENSMUSG00000117314	antisense	C030013G03Rik	ENSMUST00000233360	antisense		17	1	12466944	295
ENSMUSG00000060284	protein_coding	Sp7	ENSMUST00000078508	protein_coding	principal2	15	-1	102366513	3097
ENSMUSG00000070458	protein_coding	Vmn2r73	ENSMUST00000233115	protein_coding		7	-1	85876266	9792
ENSMUSG00000010358	protein_coding	Ifi35	ENSMUST00000010502	protein_coding	principal1	11	1	101448407	1362
ENSMUSG00000070458	protein_coding	Vmn2r73	ENSMUST00000233748	protein_coding		7	-1	85876266	9729
ENSMUSG00000049561	protein_coding	Olfr95	ENSMUST00000216318	protein_coding	principal1	17	-1	37213118	4917
ENSMUSG00000070458	protein_coding	Vmn2r73	ENSMUST00000232965	protein_coding		7	-1	85876266	9564
ENSMUSG00000020230	protein_coding	Prmt2	ENSMUST00000099571	protein_coding	principal3	10	-1	76237865	2052
ENSMUSG00000070458	protein_coding	Vmn2r73	ENSMUST00000232897	protein_coding		7	-1	85876266	9501
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000166820	protein_coding	principal2	10	1	127380662	4281
ENSMUSG00000111127	unprocessed_pseudogene	Gm5010	ENSMUST00000213131	unprocessed_pseudogene		9	-1	38679748	260
ENSMUSG00000060284	protein_coding	Sp7	ENSMUST00000229464	protein_coding	alternative2	15	-1	102366968	2873
ENSMUSG00000010358	protein_coding	Ifi35	ENSMUST00000125958	retained_intron		11	1	101448444	1117
ENSMUSG00000060284	protein_coding	Sp7	ENSMUST00000231100	processed_transcript		15	-1	102367182	117
ENSMUSG00000093652	unprocessed_pseudogene	Vmn2r-ps31	ENSMUST00000176474	unprocessed_pseudogene		6	1	123424624	870
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000111628	protein_coding		10	1	127380799	590
ENSMUSG00000056961	protein_coding	Olfr919	ENSMUST00000215612	protein_coding	alternative2	9	-1	38703673	1992
ENSMUSG00000010358	protein_coding	Ifi35	ENSMUST00000131024	nonsense_mediated_decay		11	1	101448570	1020
ENSMUSG00000056961	protein_coding	Olfr919	ENSMUST00000217508	protein_coding	alternative2	9	-1	38703232	1843
ENSMUSG00000056961	protein_coding	Olfr919	ENSMUST00000071425	protein_coding	principal2	9	-1	38698376	948
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000171434	protein_coding		10	1	127420338	322
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000239167	protein_coding	alternative2	17	1	69127000	4692
ENSMUSG00000018858	protein_coding	Mrpl58	ENSMUST00000153983	protein_coding	principal1	11	1	115403752	2596
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000143630	nonsense_mediated_decay		7	-1	101302027	2501
ENSMUSG00000001280	protein_coding	Sp1	ENSMUST00000170884	protein_coding		15	1	102406143	222
ENSMUSG00000064121	protein_coding	Olfr96	ENSMUST00000213475	protein_coding	principal1	17	1	37220146	1834
ENSMUSG00000093820	protein_coding	Vmn2r21	ENSMUST00000163607	protein_coding	principal1	6	-1	123533406	2562
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000124617	retained_intron		7	-1	101290459	608
ENSMUSG00000064121	protein_coding	Olfr96	ENSMUST00000214482	protein_coding	principal1	17	1	37220146	2161
ENSMUSG00000018858	protein_coding	Mrpl58	ENSMUST00000103036	protein_coding		11	1	115403757	749
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000122116	protein_coding	alternative2	7	-1	101302071	2083
ENSMUSG00000064121	protein_coding	Olfr96	ENSMUST00000078209	protein_coding	principal1	17	1	37225091	1051
ENSMUSG00000064127	protein_coding	Med14	ENSMUST00000096495	protein_coding	principal2	X	-1	12762073	6963
ENSMUSG00000093724	unprocessed_pseudogene	Vmn2r-ps32	ENSMUST00000175794	unprocessed_pseudogene		6	1	123559122	757
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000064793	protein_coding		10	1	127420867	4175
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000139609	nonsense_mediated_decay		7	-1	101302251	2655
ENSMUSG00000030744	protein_coding	Rps3	ENSMUST00000032998	protein_coding	principal1	7	-1	99483738	1908
ENSMUSG00000018858	protein_coding	Mrpl58	ENSMUST00000106539	protein_coding		11	1	115403754	2522
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000131988	retained_intron		7	-1	101290576	423
ENSMUSG00000021751	protein_coding	Acox2	ENSMUST00000022271	protein_coding	principal1	14	-1	8258832	2441
ENSMUSG00000064127	protein_coding	Med14	ENSMUST00000115481	protein_coding		X	-1	12716158	3729
ENSMUSG00000018858	protein_coding	Mrpl58	ENSMUST00000128632	retained_intron		11	1	115403767	805
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000123970	retained_intron		7	-1	101292143	637
ENSMUSG00000030744	protein_coding	Rps3	ENSMUST00000107096	protein_coding		7	-1	99483651	952
ENSMUSG00000024731	protein_coding	Ms4a10	ENSMUST00000072748	protein_coding	principal1	19	-1	10974670	1011
ENSMUSG00000018858	protein_coding	Mrpl58	ENSMUST00000122946	nonsense_mediated_decay		11	1	115403771	363
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000170336	protein_coding		10	1	127421124	3639
ENSMUSG00000018858	protein_coding	Mrpl58	ENSMUST00000133192	processed_transcript		11	1	115403777	306
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000134531	retained_intron		7	-1	101292146	878
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000153327	retained_intron		7	-1	101292388	706
ENSMUSG00000030744	protein_coding	Rps3	ENSMUST00000208532	protein_coding		7	-1	99483636	489
ENSMUSG00000024731	protein_coding	Ms4a10	ENSMUST00000191343	protein_coding		19	-1	10974645	862
ENSMUSG00000095486	protein_coding	Vmn2r22	ENSMUST00000170808	protein_coding	principal1	6	-1	123650725	2652
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000168780	protein_coding		10	1	127421232	447
ENSMUSG00000021751	protein_coding	Acox2	ENSMUST00000164598	protein_coding	principal1	14	-1	8259353	2907
ENSMUSG00000069520	protein_coding	Tmem19	ENSMUST00000219890	protein_coding		10	-1	115362224	2949
ENSMUSG00000030744	protein_coding	Rps3	ENSMUST00000128725	retained_intron		7	-1	99483650	3183
ENSMUSG00000018858	protein_coding	Mrpl58	ENSMUST00000021079	processed_transcript		11	1	115403822	666
ENSMUSG00000095486	protein_coding	Vmn2r22	ENSMUST00000232854	retained_intron		6	-1	123650725	5957
ENSMUSG00000024731	protein_coding	Ms4a10	ENSMUST00000190246	protein_coding		19	-1	10965856	407
ENSMUSG00000018858	protein_coding	Mrpl58	ENSMUST00000155134	retained_intron		11	1	115409861	534
ENSMUSG00000069520	protein_coding	Tmem19	ENSMUST00000217887	protein_coding		10	-1	115362247	3084
ENSMUSG00000018858	protein_coding	Mrpl58	ENSMUST00000135619	retained_intron		11	1	115403782	468
ENSMUSG00000001280	protein_coding	Sp1	ENSMUST00000163709	protein_coding	alternative2	15	1	102406333	3134
ENSMUSG00000021751	protein_coding	Acox2	ENSMUST00000116361	processed_transcript		14	-1	8246403	591
ENSMUSG00000030744	protein_coding	Rps3	ENSMUST00000128174	retained_intron		7	-1	99483634	932
ENSMUSG00000092440	unprocessed_pseudogene	Vmn2r-ps78	ENSMUST00000173350	unprocessed_pseudogene		7	1	85884457	308
ENSMUSG00000021751	protein_coding	Acox2	ENSMUST00000165169	retained_intron		14	-1	8246430	440
ENSMUSG00000018858	protein_coding	Mrpl58	ENSMUST00000134386	retained_intron		11	1	115410160	513
ENSMUSG00000108515	unprocessed_pseudogene	Olfr717-ps1	ENSMUST00000205589	unprocessed_pseudogene		13	-1	106197771	556
ENSMUSG00000114217	processed_pseudogene	Gm7054	ENSMUST00000224407	processed_pseudogene		13	1	106475936	820
ENSMUSG00000021751	protein_coding	Acox2	ENSMUST00000164412	retained_intron		14	-1	8253522	782
ENSMUSG00000027496	protein_coding	Aurka	ENSMUST00000109140	protein_coding	alternative2	2	-1	172370535	1862
ENSMUSG00000085072	antisense	Ict1os	ENSMUST00000125653	antisense		11	-1	115408314	1052
ENSMUSG00000091620	protein_coding	Vmn2r23	ENSMUST00000233414	retained_intron		6	1	123702670	7223
ENSMUSG00000021751	protein_coding	Acox2	ENSMUST00000170534	protein_coding		14	-1	8257871	711
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000151297	retained_intron		7	-1	101296769	829
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000140059	processed_transcript		7	-1	101296782	377
ENSMUSG00000031139	protein_coding	Mcf2	ENSMUST00000101531	protein_coding	principal3	X	-1	60147700	3671
ENSMUSG00000097155	lincRNA	Gm26511	ENSMUST00000181400	lincRNA		9	-1	21723450	1895
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000164831	protein_coding		10	1	127444311	2937
ENSMUSG00000021751	protein_coding	Acox2	ENSMUST00000171567	processed_transcript		14	-1	8258154	821
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000146445	retained_intron		7	-1	101296712	584
ENSMUSG00000043843	protein_coding	Tmem145	ENSMUST00000140016	retained_intron		7	1	25306106	931
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000123835	retained_intron		7	-1	101297169	518
ENSMUSG00000021751	protein_coding	Acox2	ENSMUST00000171175	retained_intron		14	-1	8256934	468
ENSMUSG00000027496	protein_coding	Aurka	ENSMUST00000109139	protein_coding	alternative2	2	-1	172370506	1905
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000035181	protein_coding	principal3	9	1	105395392	2755
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000140553	nonsense_mediated_decay		7	-1	101302071	459
ENSMUSG00000010080	protein_coding	Epn3	ENSMUST00000127305	protein_coding	principal1	11	-1	94499974	3884
ENSMUSG00000031139	protein_coding	Mcf2	ENSMUST00000063507	protein_coding	alternative2	X	-1	60179089	4227
ENSMUSG00000103399	processed_pseudogene	Gm29747	ENSMUST00000194764	processed_pseudogene		3	1	7893335	585
ENSMUSG00000027496	protein_coding	Aurka	ENSMUST00000128004	retained_intron		2	-1	172363131	596
ENSMUSG00000001280	protein_coding	Sp1	ENSMUST00000001326	protein_coding	principal2	15	1	102406380	7754
ENSMUSG00000031766	protein_coding	Slc12a3	ENSMUST00000034218	protein_coding	principal2	8	1	94329201	3299
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000207121	nonsense_mediated_decay		7	-1	101302051	358
ENSMUSG00000027496	protein_coding	Aurka	ENSMUST00000126107	retained_intron		2	-1	172370521	672
ENSMUSG00000022811	protein_coding	Zfp148	ENSMUST00000165418	protein_coding	principal1	16	1	33380836	9830
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000176597	retained_intron		9	1	105395400	1329
ENSMUSG00000047767	protein_coding	Atg16l2	ENSMUST00000209093	retained_intron		7	-1	101302049	374
ENSMUSG00000001280	protein_coding	Sp1	ENSMUST00000165837	protein_coding		15	1	102406755	652
ENSMUSG00000031139	protein_coding	Mcf2	ENSMUST00000033478	protein_coding	alternative2	X	-1	60147643	3659
ENSMUSG00000069520	protein_coding	Tmem19	ENSMUST00000092170	protein_coding	principal1	10	-1	115362267	3012
ENSMUSG00000031766	protein_coding	Slc12a3	ENSMUST00000212134	protein_coding	alternative2	8	1	94329205	4310
ENSMUSG00000022811	protein_coding	Zfp148	ENSMUST00000232023	protein_coding		16	1	33380863	2670
ENSMUSG00000028069	protein_coding	Gpatch4	ENSMUST00000029707	protein_coding	principal1	3	1	88043108	1630
ENSMUSG00000001280	protein_coding	Sp1	ENSMUST00000169619	protein_coding		15	1	102407269	328
ENSMUSG00000111425	processed_pseudogene	Gm47324	ENSMUST00000213690	processed_pseudogene		7	1	101238218	1061
ENSMUSG00000022811	protein_coding	Zfp148	ENSMUST00000231894	processed_transcript		16	1	33381130	653
ENSMUSG00000091620	protein_coding	Vmn2r23	ENSMUST00000172391	protein_coding	principal1	6	1	123702670	8119
ENSMUSG00000069520	protein_coding	Tmem19	ENSMUST00000217884	protein_coding		10	-1	115362501	2799
ENSMUSG00000001280	protein_coding	Sp1	ENSMUST00000168802	protein_coding		15	1	102407588	515
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000123807	protein_coding	alternative2	9	1	105395415	2349
ENSMUSG00000010080	protein_coding	Epn3	ENSMUST00000010224	processed_transcript		11	-1	94499909	2089
ENSMUSG00000022811	protein_coding	Zfp148	ENSMUST00000231732	processed_transcript		16	1	33381618	464
ENSMUSG00000057363	protein_coding	Uxs1	ENSMUST00000126008	protein_coding	principal1	1	-1	43827800	4620
ENSMUSG00000091620	protein_coding	Vmn2r23	ENSMUST00000233267	nonsense_mediated_decay		6	1	123702670	8295
ENSMUSG00000010080	protein_coding	Epn3	ENSMUST00000150526	processed_transcript		11	-1	94499120	390
ENSMUSG00000091620	protein_coding	Vmn2r23	ENSMUST00000233008	nonsense_mediated_decay		6	1	123702670	8225
ENSMUSG00000010080	protein_coding	Epn3	ENSMUST00000142992	processed_transcript		11	-1	94498250	789
ENSMUSG00000091620	protein_coding	Vmn2r23	ENSMUST00000233395	retained_intron		6	1	123702670	11646
ENSMUSG00000022811	protein_coding	Zfp148	ENSMUST00000089677	protein_coding	principal1	16	1	33400445	4032
ENSMUSG00000069520	protein_coding	Tmem19	ENSMUST00000219821	processed_transcript		10	-1	115349064	716
ENSMUSG00000027496	protein_coding	Aurka	ENSMUST00000028997	protein_coding	principal3	2	-1	172370506	1905
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000164161	nonsense_mediated_decay		10	1	127444311	2906
ENSMUSG00000031766	protein_coding	Slc12a3	ENSMUST00000212041	retained_intron		8	1	94329210	2910
ENSMUSG00000028069	protein_coding	Gpatch4	ENSMUST00000194380	retained_intron		3	1	88043109	745
ENSMUSG00000069520	protein_coding	Tmem19	ENSMUST00000217848	protein_coding		10	-1	115361962	704
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000105251	protein_coding		10	1	127444311	3739
ENSMUSG00000069520	protein_coding	Tmem19	ENSMUST00000218009	processed_transcript		10	-1	115362257	465
ENSMUSG00000031766	protein_coding	Slc12a3	ENSMUST00000212915	retained_intron		8	1	94345815	684
ENSMUSG00000069520	protein_coding	Tmem19	ENSMUST00000220336	protein_coding		10	-1	115362493	372
ENSMUSG00000031766	protein_coding	Slc12a3	ENSMUST00000212632	retained_intron		8	1	94352453	2763
ENSMUSG00000031766	protein_coding	Slc12a3	ENSMUST00000211942	retained_intron		8	1	94355046	3161
ENSMUSG00000069520	protein_coding	Tmem19	ENSMUST00000219597	retained_intron		10	-1	115362197	474
ENSMUSG00000096709	processed_pseudogene	Gm7352	ENSMUST00000167577	processed_pseudogene		14	1	19511367	1192
ENSMUSG00000002908	protein_coding	Kcnn1	ENSMUST00000110078	protein_coding	principal2	8	-1	70857013	4047
ENSMUSG00000031766	protein_coding	Slc12a3	ENSMUST00000211905	protein_coding		8	1	94356311	1147
ENSMUSG00000028069	protein_coding	Gpatch4	ENSMUST00000194258	protein_coding		3	1	88043124	959
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000105249	protein_coding	alternative2	10	1	127444311	3654
ENSMUSG00000118559	protein_coding	A930007A09Rik	ENSMUST00000239037	protein_coding	principal1	16	1	13754566	3972
ENSMUSG00000114630	lincRNA	Gm48105	ENSMUST00000225038	lincRNA		14	1	19504718	805
ENSMUSG00000114630	lincRNA	Gm48105	ENSMUST00000224578	lincRNA		14	1	19504931	587
ENSMUSG00000057363	protein_coding	Uxs1	ENSMUST00000076997	nonsense_mediated_decay		1	-1	43827741	1921
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000225740	nonsense_mediated_decay		17	1	69156744	3952
ENSMUSG00000002908	protein_coding	Kcnn1	ENSMUST00000212086	protein_coding	alternative2	8	-1	70855585	2964
ENSMUSG00000114630	lincRNA	Gm48105	ENSMUST00000225749	lincRNA		14	1	19504938	2078
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000165440	protein_coding		10	1	127459465	273
ENSMUSG00000028069	protein_coding	Gpatch4	ENSMUST00000193398	protein_coding	principal1	3	1	88043128	2210
ENSMUSG00000057363	protein_coding	Uxs1	ENSMUST00000139451	protein_coding		1	-1	43827800	854
ENSMUSG00000114272	transcribed_processed_pseudogene	Gm36704	ENSMUST00000225835	transcribed_processed_pseudogene		14	-1	19496534	165
ENSMUSG00000002908	protein_coding	Kcnn1	ENSMUST00000212611	protein_coding	principal2	8	-1	70863258	2528
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000177188	protein_coding		12	1	85824659	699
ENSMUSG00000098103	processed_pseudogene	Gm27005	ENSMUST00000182783	processed_pseudogene		16	1	25726696	921
ENSMUSG00000064127	protein_coding	Med14	ENSMUST00000124053	retained_intron		X	-1	12762073	5129
ENSMUSG00000047501	protein_coding	Cldn4	ENSMUST00000051401	protein_coding	principal1	5	-1	134946934	1816
ENSMUSG00000114272	transcribed_processed_pseudogene	Gm36704	ENSMUST00000225729	processed_transcript		14	-1	19504867	568
ENSMUSG00000028069	protein_coding	Gpatch4	ENSMUST00000166021	protein_coding	principal1	3	1	88043108	1768
ENSMUSG00000064127	protein_coding	Med14	ENSMUST00000124070	retained_intron		X	-1	12713975	627
ENSMUSG00000002908	protein_coding	Kcnn1	ENSMUST00000212243	nonsense_mediated_decay		8	-1	70852748	839
ENSMUSG00000114272	transcribed_processed_pseudogene	Gm36704	ENSMUST00000224017	processed_transcript		14	-1	19504895	716
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000176350	nonsense_mediated_decay		9	1	105395489	809
ENSMUSG00000002908	protein_coding	Kcnn1	ENSMUST00000212509	protein_coding	alternative2	8	-1	70855396	1608
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000163794	retained_intron		10	1	127459491	395
ENSMUSG00000064127	protein_coding	Med14	ENSMUST00000076016	protein_coding	alternative2	X	-1	12762073	2561
ENSMUSG00000002908	protein_coding	Kcnn1	ENSMUST00000212084	protein_coding		8	-1	70850739	338
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000176940	protein_coding	alternative2	9	1	105395807	1151
ENSMUSG00000085586	processed_transcript	Gm11613	ENSMUST00000134427	processed_transcript		11	-1	97660367	1971
ENSMUSG00000002908	protein_coding	Kcnn1	ENSMUST00000212414	protein_coding		8	-1	70863007	613
ENSMUSG00000022560	protein_coding	Slc52a2	ENSMUST00000023220	protein_coding	principal1	15	1	76538832	5289
ENSMUSG00000040681	protein_coding	Hmgn1	ENSMUST00000050884	protein_coding	principal1	16	-1	96127729	2174
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000225316	retained_intron		17	1	69156778	3966
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000169888	protein_coding		10	1	127459495	2906
ENSMUSG00000002908	protein_coding	Kcnn1	ENSMUST00000110081	protein_coding	alternative2	8	-1	70857008	4045
ENSMUSG00000106675	TEC	Gm43798	ENSMUST00000202056	TEC		5	-1	73459722	394
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000171823	processed_transcript		10	1	127459535	874
ENSMUSG00000022560	protein_coding	Slc52a2	ENSMUST00000230994	retained_intron		15	1	76538964	2889
ENSMUSG00000056708	protein_coding	Ier5	ENSMUST00000055322	protein_coding	principal1	1	-1	155099636	3276
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000164469	retained_intron		10	1	127481314	763
ENSMUSG00000025132	protein_coding	Arhgdia	ENSMUST00000106197	protein_coding	principal1	11	-1	120581624	1867
ENSMUSG00000040681	protein_coding	Hmgn1	ENSMUST00000233638	retained_intron		16	-1	96125339	801
ENSMUSG00000081444	processed_pseudogene	Gm15803	ENSMUST00000120118	processed_pseudogene		16	1	38813990	394
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000080208	protein_coding	principal2	17	1	69156810	4047
ENSMUSG00000040681	protein_coding	Hmgn1	ENSMUST00000233292	protein_coding		16	-1	96127604	261
ENSMUSG00000118075	lincRNA	Gm38576	ENSMUST00000236805	lincRNA		18	1	84744067	901
ENSMUSG00000021620	protein_coding	Acot12	ENSMUST00000022120	protein_coding	principal1	13	1	91741512	3058
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000168268	retained_intron		10	1	127485291	537
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000177402	nonsense_mediated_decay		9	1	105397814	841
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000168079	protein_coding		10	1	127485482	462
ENSMUSG00000082039	processed_pseudogene	Gm15653	ENSMUST00000119247	processed_pseudogene		5	-1	73477353	907
ENSMUSG00000040681	protein_coding	Hmgn1	ENSMUST00000233297	retained_intron		16	-1	96127466	664
ENSMUSG00000081748	processed_pseudogene	Gm14870	ENSMUST00000118414	processed_pseudogene		X	1	108893496	156
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000189758	nonsense_mediated_decay		9	1	105397814	1886
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000171426	protein_coding		10	1	127492657	938
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000077046	protein_coding	principal2	10	1	127390311	4029
ENSMUSG00000021620	protein_coding	Acot12	ENSMUST00000161337	retained_intron		13	1	91741533	614
ENSMUSG00000057363	protein_coding	Uxs1	ENSMUST00000136179	processed_transcript		1	-1	43827016	896
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000225977	protein_coding	alternative2	17	1	69156845	3188
ENSMUSG00000018363	protein_coding	Smurf2	ENSMUST00000103067	protein_coding		11	-1	106920715	5290
ENSMUSG00000113842	TEC	Gm48138	ENSMUST00000222511	TEC		13	1	96556232	2880
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000137208	processed_transcript		9	1	105400788	808
ENSMUSG00000025132	protein_coding	Arhgdia	ENSMUST00000067936	protein_coding	principal1	11	-1	120581380	2150
ENSMUSG00000025404	protein_coding	R3hdm2	ENSMUST00000105250	protein_coding		10	1	127390311	3975
ENSMUSG00000057363	protein_coding	Uxs1	ENSMUST00000153317	protein_coding		1	-1	43827750	374
ENSMUSG00000114193	TEC	Gm48139	ENSMUST00000223019	TEC		13	1	96605677	3915
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000216711	retained_intron		9	1	105403396	529
ENSMUSG00000026447	protein_coding	Pik3c2b	ENSMUST00000153707	protein_coding		1	1	133045667	1269
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000238898	protein_coding		17	1	69156858	4368
ENSMUSG00000021620	protein_coding	Acot12	ENSMUST00000159214	processed_transcript		13	1	91779328	782
ENSMUSG00000024974	protein_coding	Smc3	ENSMUST00000025930	protein_coding	principal1	19	1	53600398	4851
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000190934	retained_intron		9	1	105409147	2123
ENSMUSG00000113068	antisense	Gm48133	ENSMUST00000220785	antisense		13	-1	96543652	489
ENSMUSG00000040483	protein_coding	Xaf1	ENSMUST00000151440	protein_coding		11	1	72301629	672
ENSMUSG00000074782	antisense	4833422C13Rik	ENSMUST00000160385	antisense		13	-1	91741872	2828
ENSMUSG00000022798	protein_coding	Tex55	ENSMUST00000122078	protein_coding	principal1	16	-1	38828749	1367
ENSMUSG00000024974	protein_coding	Smc3	ENSMUST00000157053	retained_intron		19	1	53635467	471
ENSMUSG00000057363	protein_coding	Uxs1	ENSMUST00000134860	processed_transcript		1	-1	43827762	355
ENSMUSG00000032567	protein_coding	Aste1	ENSMUST00000167674	protein_coding	alternative2	9	1	105401475	1227
ENSMUSG00000074782	antisense	4833422C13Rik	ENSMUST00000161491	antisense		13	-1	91741776	1766
ENSMUSG00000024974	protein_coding	Smc3	ENSMUST00000171083	retained_intron		19	1	53643358	695
ENSMUSG00000086818	antisense	Ctrcos	ENSMUST00000128368	antisense		4	1	141844321	322
ENSMUSG00000057363	protein_coding	Uxs1	ENSMUST00000136704	nonsense_mediated_decay		1	-1	43827762	471
ENSMUSG00000079001	protein_coding	4930404H24Rik	ENSMUST00000109783	protein_coding	principal1	2	1	153492790	331
ENSMUSG00000026447	protein_coding	Pik3c2b	ENSMUST00000145153	retained_intron		1	1	133046012	2234
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000233509	protein_coding	alternative2	17	1	69207870	2736
ENSMUSG00000057363	protein_coding	Uxs1	ENSMUST00000128261	protein_coding		1	-1	43827774	449
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000232706	protein_coding	alternative2	17	1	69207870	2439
ENSMUSG00000022798	protein_coding	Tex55	ENSMUST00000130241	retained_intron		16	-1	38828731	1246
ENSMUSG00000062478	protein_coding	Ctrc	ENSMUST00000176781	nonsense_mediated_decay		4	-1	141846263	591
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000233964	protein_coding		17	1	69207882	2703
ENSMUSG00000074782	antisense	4833422C13Rik	ENSMUST00000099331	antisense		13	-1	91741828	2083
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000223703	protein_coding		17	1	69243636	3687
ENSMUSG00000113314	lincRNA	Gm2721	ENSMUST00000222380	lincRNA		12	-1	105403760	1571
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000225604	retained_intron		17	1	69243653	647
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000224523	protein_coding		17	1	69248671	1817
ENSMUSG00000113314	lincRNA	Gm2721	ENSMUST00000222652	lincRNA		12	-1	105404618	459
ENSMUSG00000026447	protein_coding	Pik3c2b	ENSMUST00000124934	retained_intron		1	1	133046012	2817
ENSMUSG00000018363	protein_coding	Smurf2	ENSMUST00000139297	nonsense_mediated_decay		11	-1	106920275	2957
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000224951	protein_coding		17	1	69262189	786
ENSMUSG00000114181	lincRNA	Gm46376	ENSMUST00000222653	lincRNA		12	1	105404019	654
ENSMUSG00000107436	TEC	Gm44416	ENSMUST00000204055	TEC		6	-1	87174009	2066
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000225209	retained_intron		17	1	69262263	3219
ENSMUSG00000022510	protein_coding	Trp63	ENSMUST00000115307	protein_coding		16	1	25683763	1782
ENSMUSG00000062478	protein_coding	Ctrc	ENSMUST00000105781	protein_coding		4	-1	141846283	784
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000223816	retained_intron		17	1	69262325	471
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000225695	protein_coding		17	1	69274776	670
ENSMUSG00000018363	protein_coding	Smurf2	ENSMUST00000092517	protein_coding	principal1	11	-1	106920470	3125
ENSMUSG00000054909	antisense	Wbscr25	ENSMUST00000148729	antisense		5	-1	135001350	2075
ENSMUSG00000094910	protein_coding	D430019H16Rik	ENSMUST00000178224	protein_coding	principal1	12	1	105453856	5786
ENSMUSG00000108006	antisense	Gm44418	ENSMUST00000204219	antisense		6	1	87277745	705
ENSMUSG00000107780	TEC	9530013L04Rik	ENSMUST00000203393	TEC		6	-1	87322339	782
ENSMUSG00000031385	protein_coding	Plxnb3	ENSMUST00000149478	retained_intron		X	1	73757090	6217
ENSMUSG00000086629	processed_transcript	2810403D21Rik	ENSMUST00000207966	lincRNA		X	1	108833800	1433
ENSMUSG00000054909	antisense	Wbscr25	ENSMUST00000131403	antisense		5	-1	135000507	1011
ENSMUSG00000031385	protein_coding	Plxnb3	ENSMUST00000146812	retained_intron		X	1	73757090	5030
ENSMUSG00000040483	protein_coding	Xaf1	ENSMUST00000146233	protein_coding	principal1	11	1	72301630	2597
ENSMUSG00000026788	protein_coding	Zbtb43	ENSMUST00000028125	protein_coding	principal1	2	-1	33468532	4998
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000223565	processed_transcript		17	1	69281714	3026
ENSMUSG00000108195	TEC	Gm44415	ENSMUST00000204151	TEC		6	-1	87140852	2112
ENSMUSG00000018363	protein_coding	Smurf2	ENSMUST00000130688	processed_transcript		11	-1	106829006	596
ENSMUSG00000024044	protein_coding	Epb41l3	ENSMUST00000112680	protein_coding	alternative2	17	1	69156810	4073
ENSMUSG00000026471	protein_coding	Mr1	ENSMUST00000194612	nonsense_mediated_decay		1	-1	155146804	2949
ENSMUSG00000113535	lincRNA	AU015791	ENSMUST00000223443	lincRNA		12	1	105513480	1457
ENSMUSG00000018363	protein_coding	Smurf2	ENSMUST00000144027	processed_transcript		11	-1	106839298	875
ENSMUSG00000031385	protein_coding	Plxnb3	ENSMUST00000147127	retained_intron		X	1	73757090	5212
ENSMUSG00000086629	processed_transcript	2810403D21Rik	ENSMUST00000153212	lincRNA		X	1	108834478	1005
ENSMUSG00000026788	protein_coding	Zbtb43	ENSMUST00000113156	protein_coding		2	-1	33468505	1828
ENSMUSG00000026471	protein_coding	Mr1	ENSMUST00000191773	retained_intron		1	-1	155134022	3214
ENSMUSG00000040483	protein_coding	Xaf1	ENSMUST00000140842	protein_coding		11	1	72301639	651
ENSMUSG00000070473	protein_coding	Cldn3	ENSMUST00000094245	protein_coding	principal1	5	1	134986214	1259
ENSMUSG00000113479	lincRNA	Gm47796	ENSMUST00000222492	lincRNA		12	1	105561263	905
ENSMUSG00000026788	protein_coding	Zbtb43	ENSMUST00000155198	protein_coding		2	-1	33465082	674
ENSMUSG00000018363	protein_coding	Smurf2	ENSMUST00000167787	protein_coding	principal1	11	-1	106920359	2358
ENSMUSG00000100572	antisense	2410021H03Rik	ENSMUST00000187090	antisense		17	-1	69277208	764
ENSMUSG00000062478	protein_coding	Ctrc	ENSMUST00000153282	processed_transcript		4	-1	141846357	956
ENSMUSG00000043843	protein_coding	Tmem145	ENSMUST00000119703	protein_coding	alternative2	7	1	25306108	1781
ENSMUSG00000062478	protein_coding	Ctrc	ENSMUST00000136064	processed_transcript		4	-1	141845228	310
ENSMUSG00000116878	processed_transcript	Gm29880	ENSMUST00000231551	processed_transcript		16	-1	92207488	1477
ENSMUSG00000104367	lincRNA	Gm38079	ENSMUST00000195603	lincRNA		1	1	182976276	154
ENSMUSG00000040483	protein_coding	Xaf1	ENSMUST00000094041	nonsense_mediated_decay		11	1	72301663	415
ENSMUSG00000026788	protein_coding	Zbtb43	ENSMUST00000126442	protein_coding		2	-1	33468559	487
ENSMUSG00000026788	protein_coding	Zbtb43	ENSMUST00000095035	protein_coding		2	-1	33462353	4925
ENSMUSG00000080073	processed_pseudogene	Gm9427	ENSMUST00000116187	processed_pseudogene		X	1	4455353	651
ENSMUSG00000003992	protein_coding	Ssbp2	ENSMUST00000156547	processed_transcript		13	1	91460283	914
ENSMUSG00000094323	processed_pseudogene	Gm15256	ENSMUST00000177793	processed_pseudogene		X	1	4511847	883
ENSMUSG00000062478	protein_coding	Ctrc	ENSMUST00000037059	protein_coding	principal1	4	-1	141846359	951
ENSMUSG00000040483	protein_coding	Xaf1	ENSMUST00000142921	retained_intron		11	1	72301665	2582
ENSMUSG00000043843	protein_coding	Tmem145	ENSMUST00000205639	protein_coding	alternative2	7	1	25306108	2789
ENSMUSG00000028914	protein_coding	Casp9	ENSMUST00000128660	processed_transcript		4	1	141793612	2027
ENSMUSG00000086939	lincRNA	Gm13530	ENSMUST00000134014	lincRNA		2	1	33489782	390
ENSMUSG00000021701	protein_coding	Plk2	ENSMUST00000022212	protein_coding	principal1	13	1	110395046	2800
ENSMUSG00000086629	processed_transcript	2810403D21Rik	ENSMUST00000144421	lincRNA		X	1	108834502	747
ENSMUSG00000043843	protein_coding	Tmem145	ENSMUST00000108409	protein_coding	principal2	7	1	25306108	2298
ENSMUSG00000021701	protein_coding	Plk2	ENSMUST00000224489	retained_intron		13	1	110395048	2316
ENSMUSG00000021070	protein_coding	Bdkrb2	ENSMUST00000001652	protein_coding	principal1	12	1	105563226	3792
ENSMUSG00000108900	protein_coding	Ccdc194	ENSMUST00000207913	protein_coding	principal1	8	-1	71525711	1820
ENSMUSG00000039672	protein_coding	Kcne2	ENSMUST00000047383	protein_coding	principal1	16	1	92292389	1690
ENSMUSG00000110619	processed_pseudogene	Gm7850	ENSMUST00000212909	processed_pseudogene		8	1	71523574	712
ENSMUSG00000021701	protein_coding	Plk2	ENSMUST00000223756	retained_intron		13	1	110395048	1543
ENSMUSG00000086629	processed_transcript	2810403D21Rik	ENSMUST00000123040	lincRNA		X	1	108834578	601
ENSMUSG00000021701	protein_coding	Plk2	ENSMUST00000225340	retained_intron		13	1	110396012	602
ENSMUSG00000039672	protein_coding	Kcne2	ENSMUST00000113971	protein_coding	principal1	16	1	92295616	1632
ENSMUSG00000102348	TEC	Gm10568	ENSMUST00000193244	TEC		1	1	3680155	1634
ENSMUSG00000086629	processed_transcript	2810403D21Rik	ENSMUST00000131640	lincRNA		X	1	108834657	546
ENSMUSG00000021701	protein_coding	Plk2	ENSMUST00000225156	retained_intron		13	1	110397797	689
ENSMUSG00000102592	TEC	Gm38385	ENSMUST00000194454	TEC		1	1	3752010	2351
ENSMUSG00000116823	antisense	Gm49595	ENSMUST00000231277	antisense		16	-1	16911716	515
ENSMUSG00000027651	protein_coding	Rprd1b	ENSMUST00000103123	protein_coding	principal3	2	1	158028497	4504
ENSMUSG00000102343	lincRNA	Gm37381	ENSMUST00000194643	lincRNA		1	-1	3986215	657
ENSMUSG00000086629	processed_transcript	2810403D21Rik	ENSMUST00000145250	retained_intron		X	1	108834664	3347
ENSMUSG00000102343	lincRNA	Gm37381	ENSMUST00000192427	lincRNA		1	-1	3985984	899
ENSMUSG00000086629	processed_transcript	2810403D21Rik	ENSMUST00000152089	lincRNA		X	1	108834679	852
ENSMUSG00000110018	transcribed_processed_pseudogene	5430437J10Rik	ENSMUST00000211750	processed_transcript		15	1	5496266	1234
ENSMUSG00000086629	processed_transcript	2810403D21Rik	ENSMUST00000151166	lincRNA		X	1	108834695	1107
ENSMUSG00000091794	protein_coding	Vmn2r18	ENSMUST00000233599	protein_coding	alternative2	5	-1	151606021	3341
ENSMUSG00000110018	transcribed_processed_pseudogene	5430437J10Rik	ENSMUST00000228069	processed_transcript		15	1	5496318	1166
ENSMUSG00000086629	processed_transcript	2810403D21Rik	ENSMUST00000124329	lincRNA		X	1	108903386	1660
ENSMUSG00000027651	protein_coding	Rprd1b	ENSMUST00000109519	retained_intron		2	1	158028508	1597
ENSMUSG00000091794	protein_coding	Vmn2r18	ENSMUST00000233687	nonsense_mediated_decay		5	-1	151606021	4841
ENSMUSG00000110018	transcribed_processed_pseudogene	5430437J10Rik	ENSMUST00000227355	transcribed_processed_pseudogene		15	1	5580212	634
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000112949	protein_coding	principal1	6	-1	115675964	2946
ENSMUSG00000091794	protein_coding	Vmn2r18	ENSMUST00000232853	nonsense_mediated_decay		5	-1	151606021	3532
ENSMUSG00000091794	protein_coding	Vmn2r18	ENSMUST00000232905	protein_coding		5	-1	151606021	3113
ENSMUSG00000026471	protein_coding	Mr1	ENSMUST00000027744	protein_coding	principal1	1	-1	155146783	2512
ENSMUSG00000091794	protein_coding	Vmn2r18	ENSMUST00000165928	protein_coding	principal2	5	-1	151586924	2385
ENSMUSG00000026471	protein_coding	Mr1	ENSMUST00000192410	nonsense_mediated_decay		1	-1	155146804	1500
ENSMUSG00000026471	protein_coding	Mr1	ENSMUST00000195579	retained_intron		1	-1	155146814	2170
ENSMUSG00000111365	bidirectional_promoter_lncRNA	Gm47772	ENSMUST00000216236	bidirectional_promoter_lncRNA		9	1	24503449	537
ENSMUSG00000027651	protein_coding	Rprd1b	ENSMUST00000156552	processed_transcript		2	1	158028692	4179
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000000451	protein_coding	principal1	6	-1	115676635	3070
ENSMUSG00000026181	protein_coding	Ppm1f	ENSMUST00000027373	protein_coding	principal1	16	1	16896469	4922
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000203759	protein_coding		6	-1	115621825	538
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000203276	retained_intron		6	-1	115620318	838
ENSMUSG00000046718	protein_coding	Bst2	ENSMUST00000051672	protein_coding	principal1	8	-1	71537456	792
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000203142	nonsense_mediated_decay		6	-1	115623544	676
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000124553	retained_intron		6	-1	115630726	732
ENSMUSG00000046718	protein_coding	Bst2	ENSMUST00000212386	processed_transcript		8	-1	71537331	412
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000203826	retained_intron		6	-1	115627029	745
ENSMUSG00000026181	protein_coding	Ppm1f	ENSMUST00000232247	protein_coding		16	1	16896574	432
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000204512	retained_intron		6	-1	115627067	674
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000147979	protein_coding		6	-1	115632995	613
ENSMUSG00000009248	protein_coding	Ascl2	ENSMUST00000009392	protein_coding	principal2	7	-1	142969264	1605
ENSMUSG00000006442	protein_coding	Srm	ENSMUST00000006611	protein_coding	principal1	4	1	148591503	1338
ENSMUSG00000041347	protein_coding	Bdkrb1	ENSMUST00000182899	protein_coding	principal1	12	1	105603085	1313
ENSMUSG00000009248	protein_coding	Ascl2	ENSMUST00000121862	protein_coding	alternative2	7	-1	142968717	814
ENSMUSG00000000441	protein_coding	Raf1	ENSMUST00000127503	retained_intron		6	-1	115676635	2277
ENSMUSG00000010048	protein_coding	Ifrd2	ENSMUST00000010192	protein_coding	principal1	9	1	107587642	2056
ENSMUSG00000041347	protein_coding	Bdkrb1	ENSMUST00000183086	protein_coding		12	1	105603119	879
ENSMUSG00000107994	bidirectional_promoter_lncRNA	D830050J10Rik	ENSMUST00000203858	bidirectional_promoter_lncRNA		6	1	115675968	1813
ENSMUSG00000078214	processed_pseudogene	Gm5925	ENSMUST00000105016	processed_pseudogene		X	1	4515674	1497
ENSMUSG00000006442	protein_coding	Srm	ENSMUST00000152701	retained_intron		4	1	148591918	841
ENSMUSG00000107994	bidirectional_promoter_lncRNA	D830050J10Rik	ENSMUST00000203121	bidirectional_promoter_lncRNA		6	1	115675995	1142
ENSMUSG00000041347	protein_coding	Bdkrb1	ENSMUST00000041229	protein_coding	principal1	12	1	105604091	1338
ENSMUSG00000027651	protein_coding	Rprd1b	ENSMUST00000109518	protein_coding		2	1	158028701	4399
ENSMUSG00000006442	protein_coding	Srm	ENSMUST00000140129	processed_transcript		4	1	148593894	362
ENSMUSG00000027651	protein_coding	Rprd1b	ENSMUST00000029180	protein_coding	alternative1	2	1	158028721	4283
ENSMUSG00000084392	processed_pseudogene	Rps29-ps	ENSMUST00000122083	processed_pseudogene		5	1	135006577	172
ENSMUSG00000026447	protein_coding	Pik3c2b	ENSMUST00000077730	protein_coding	principal1	1	1	133046012	7928
ENSMUSG00000028391	protein_coding	Wdr31	ENSMUST00000120095	protein_coding	principal3	4	-1	62470887	2549
ENSMUSG00000027651	protein_coding	Rprd1b	ENSMUST00000152452	protein_coding		2	1	158028799	1910
ENSMUSG00000023951	protein_coding	Vegfa	ENSMUST00000024747	protein_coding		17	-1	46031815	2765
ENSMUSG00000026447	protein_coding	Pik3c2b	ENSMUST00000239467	protein_coding		1	1	133068579	808
ENSMUSG00000028391	protein_coding	Wdr31	ENSMUST00000132263	protein_coding		4	-1	62460408	601
ENSMUSG00000027651	protein_coding	Rprd1b	ENSMUST00000128206	protein_coding		2	1	158043423	764
ENSMUSG00000101102	antisense	Gm28609	ENSMUST00000186515	antisense		1	-1	133068405	463
ENSMUSG00000027651	protein_coding	Rprd1b	ENSMUST00000135603	protein_coding		2	1	158047959	428
ENSMUSG00000010048	protein_coding	Ifrd2	ENSMUST00000194932	retained_intron		9	1	107587726	2054
ENSMUSG00000063506	protein_coding	Arhgap22	ENSMUST00000165792	protein_coding		14	1	33214026	426
ENSMUSG00000092283	processed_transcript	Gm20412	ENSMUST00000173249	processed_transcript		2	1	158117154	633
ENSMUSG00000022790	protein_coding	Igsf11	ENSMUST00000210186	processed_transcript		16	1	38892671	873
ENSMUSG00000010048	protein_coding	Ifrd2	ENSMUST00000195725	nonsense_mediated_decay		9	1	107587757	812
ENSMUSG00000010048	protein_coding	Ifrd2	ENSMUST00000193153	retained_intron		9	1	107590436	696
ENSMUSG00000010048	protein_coding	Ifrd2	ENSMUST00000195746	protein_coding		9	1	107591107	601
ENSMUSG00000059742	protein_coding	Kcnh7	ENSMUST00000075052	protein_coding	principal1	2	-1	63184278	13321
ENSMUSG00000010048	protein_coding	Ifrd2	ENSMUST00000193140	nonsense_mediated_decay		9	1	107592085	514
ENSMUSG00000063785	protein_coding	Utp14a	ENSMUST00000080713	protein_coding	principal1	X	1	48256862	2507
ENSMUSG00000059742	protein_coding	Kcnh7	ENSMUST00000112454	protein_coding		2	-1	63184287	3073
ENSMUSG00000010048	protein_coding	Ifrd2	ENSMUST00000192888	processed_transcript		9	1	107592627	469
ENSMUSG00000035032	protein_coding	Nek11	ENSMUST00000038648	protein_coding	principal1	9	-1	105395524	3173
ENSMUSG00000059742	protein_coding	Kcnh7	ENSMUST00000112452	protein_coding		2	-1	63184170	2849
ENSMUSG00000103164	lincRNA	Gm38150	ENSMUST00000192996	lincRNA		9	1	107594440	452
ENSMUSG00000103409	protein_coding	Lsmem2	ENSMUST00000191791	retained_intron		9	-1	107594425	1566
ENSMUSG00000021972	protein_coding	Hmbox1	ENSMUST00000022544	protein_coding		14	-1	64949850	3396
ENSMUSG00000059742	protein_coding	Kcnh7	ENSMUST00000131799	processed_transcript		2	-1	63184262	1079
ENSMUSG00000103409	protein_coding	Lsmem2	ENSMUST00000238519	protein_coding	principal1	9	-1	107597075	1424
ENSMUSG00000028914	protein_coding	Casp9	ENSMUST00000097805	protein_coding		4	1	141793612	1498
ENSMUSG00000021972	protein_coding	Hmbox1	ENSMUST00000176386	processed_transcript		14	-1	64822296	614
ENSMUSG00000061411	protein_coding	Nol4l	ENSMUST00000035346	protein_coding	principal1	2	-1	153529971	6399
ENSMUSG00000000439	protein_coding	Mkrn2	ENSMUST00000000449	protein_coding	principal1	6	1	115601902	6230
ENSMUSG00000081817	processed_pseudogene	Gm13590	ENSMUST00000120183	processed_pseudogene		2	-1	62670370	1588
ENSMUSG00000035032	protein_coding	Nek11	ENSMUST00000177029	nonsense_mediated_decay		9	-1	105393021	1721
ENSMUSG00000071361	protein_coding	Mcpt9	ENSMUST00000095798	protein_coding	principal1	14	-1	56030495	2000
ENSMUSG00000035032	protein_coding	Nek11	ENSMUST00000215670	processed_transcript		9	-1	105244374	665
ENSMUSG00000027379	protein_coding	Bub1	ENSMUST00000028858	protein_coding	principal1	2	-1	127831865	3421
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000110909	protein_coding	alternative1	8	1	11728105	4926
ENSMUSG00000031385	protein_coding	Plxnb3	ENSMUST00000002079	protein_coding	principal1	X	1	73757099	6030
ENSMUSG00000000439	protein_coding	Mkrn2	ENSMUST00000204409	processed_transcript		6	1	115601961	452
ENSMUSG00000028391	protein_coding	Wdr31	ENSMUST00000030087	protein_coding	principal3	4	-1	62470887	1440
ENSMUSG00000035032	protein_coding	Nek11	ENSMUST00000156256	nonsense_mediated_decay		9	-1	105395287	2236
ENSMUSG00000000439	protein_coding	Mkrn2	ENSMUST00000205248	retained_intron		6	1	115611294	1080
ENSMUSG00000063785	protein_coding	Utp14a	ENSMUST00000125966	processed_transcript		X	1	48256897	2138
ENSMUSG00000021972	protein_coding	Hmbox1	ENSMUST00000176128	protein_coding	alternative1	14	-1	64949871	2958
ENSMUSG00000081805	processed_pseudogene	Gm14335	ENSMUST00000119165	processed_pseudogene		6	-1	115639059	810
ENSMUSG00000039809	protein_coding	Gabbr2	ENSMUST00000107749	protein_coding	principal1	4	-1	46991873	5750
ENSMUSG00000035032	protein_coding	Nek11	ENSMUST00000140851	protein_coding		9	-1	105395258	1208
ENSMUSG00000063785	protein_coding	Utp14a	ENSMUST00000152624	processed_transcript		X	1	48256918	813
ENSMUSG00000027379	protein_coding	Bub1	ENSMUST00000133943	retained_intron		2	-1	127831804	1137
ENSMUSG00000099373	antisense	Gm19667	ENSMUST00000188984	antisense		9	1	105470520	3334
ENSMUSG00000028391	protein_coding	Wdr31	ENSMUST00000107452	protein_coding	alternative1	4	-1	62470887	1437
ENSMUSG00000093590	antisense	Gm20643	ENSMUST00000177284	antisense		9	1	105208196	322
ENSMUSG00000027379	protein_coding	Bub1	ENSMUST00000143824	processed_transcript		2	-1	127814910	609
ENSMUSG00000031385	protein_coding	Plxnb3	ENSMUST00000155096	retained_intron		X	1	73765531	2296
ENSMUSG00000103118	TEC	Gm37582	ENSMUST00000192953	TEC		9	1	105163125	1409
ENSMUSG00000021972	protein_coding	Hmbox1	ENSMUST00000176832	protein_coding		14	-1	64949632	1586
ENSMUSG00000039809	protein_coding	Gabbr2	ENSMUST00000129328	processed_transcript		4	-1	46688447	1887
ENSMUSG00000027379	protein_coding	Bub1	ENSMUST00000153048	processed_transcript		2	-1	127813867	438
ENSMUSG00000061411	protein_coding	Nol4l	ENSMUST00000109784	protein_coding		2	-1	153444479	5610
ENSMUSG00000028914	protein_coding	Casp9	ENSMUST00000030747	protein_coding	principal1	4	1	141793612	3897
ENSMUSG00000039809	protein_coding	Gabbr2	ENSMUST00000205643	protein_coding		4	-1	46724391	550
ENSMUSG00000028391	protein_coding	Wdr31	ENSMUST00000153615	retained_intron		4	-1	62459273	499
ENSMUSG00000058802	protein_coding	Olfr97	ENSMUST00000214622	protein_coding	principal1	17	-1	37237186	1573
ENSMUSG00000039809	protein_coding	Gabbr2	ENSMUST00000206773	processed_transcript		4	-1	46859902	720
ENSMUSG00000021972	protein_coding	Hmbox1	ENSMUST00000177326	protein_coding		14	-1	64903266	1729
ENSMUSG00000027379	protein_coding	Bub1	ENSMUST00000138624	retained_intron		2	-1	127805266	586
ENSMUSG00000028391	protein_coding	Wdr31	ENSMUST00000149281	retained_intron		4	-1	62460849	929
ENSMUSG00000085430	antisense	Gm15619	ENSMUST00000128415	antisense		9	1	105333513	1294
ENSMUSG00000022790	protein_coding	Igsf11	ENSMUST00000114706	protein_coding		16	1	38901471	1578
ENSMUSG00000028391	protein_coding	Wdr31	ENSMUST00000155522	protein_coding		4	-1	62470896	537
ENSMUSG00000021972	protein_coding	Hmbox1	ENSMUST00000175744	protein_coding	alternative1	14	-1	64949856	1771
ENSMUSG00000058802	protein_coding	Olfr97	ENSMUST00000216225	protein_coding	principal1	17	-1	37237330	1847
ENSMUSG00000022790	protein_coding	Igsf11	ENSMUST00000209958	processed_transcript		16	1	38901472	873
ENSMUSG00000028391	protein_coding	Wdr31	ENSMUST00000135811	protein_coding		4	-1	62470874	400
ENSMUSG00000061411	protein_coding	Nol4l	ENSMUST00000132770	processed_transcript		2	-1	153445581	709
ENSMUSG00000058802	protein_coding	Olfr97	ENSMUST00000073667	protein_coding	principal1	17	-1	37237330	1555
ENSMUSG00000113891	lincRNA	Gm47683	ENSMUST00000221151	lincRNA		13	-1	43500167	567
ENSMUSG00000028914	protein_coding	Casp9	ENSMUST00000153094	protein_coding		4	1	141793710	790
ENSMUSG00000058802	protein_coding	Olfr97	ENSMUST00000213328	protein_coding	principal1	17	-1	37237163	2168
ENSMUSG00000021972	protein_coding	Hmbox1	ENSMUST00000176489	protein_coding		14	-1	64949847	1422
ENSMUSG00000021972	protein_coding	Hmbox1	ENSMUST00000175905	protein_coding		14	-1	64949847	1715
ENSMUSG00000058802	protein_coding	Olfr97	ENSMUST00000214848	protein_coding	principal1	17	-1	37237182	1861
ENSMUSG00000113177	processed_pseudogene	Gm7214	ENSMUST00000222428	processed_pseudogene		13	-1	43509242	272
ENSMUSG00000028914	protein_coding	Casp9	ENSMUST00000138359	processed_transcript		4	1	141793844	331
ENSMUSG00000081297	processed_pseudogene	Gm12209	ENSMUST00000120089	processed_pseudogene		11	-1	52479103	596
ENSMUSG00000117299	processed_pseudogene	Gm9288	ENSMUST00000233191	processed_pseudogene		17	1	65427478	599
ENSMUSG00000058802	protein_coding	Olfr97	ENSMUST00000207414	protein_coding	principal1	17	-1	37232368	933
ENSMUSG00000028914	protein_coding	Casp9	ENSMUST00000124161	processed_transcript		4	1	141814758	854
ENSMUSG00000030222	protein_coding	Rerg	ENSMUST00000032347	protein_coding	principal1	6	-1	137170497	2075
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000119547	protein_coding	alternative1	10	1	81252935	1916
ENSMUSG00000117140	processed_pseudogene	Gm18138	ENSMUST00000233254	processed_pseudogene		17	-1	65513968	493
ENSMUSG00000021972	protein_coding	Hmbox1	ENSMUST00000176657	retained_intron		14	-1	64949847	4740
ENSMUSG00000021972	protein_coding	Hmbox1	ENSMUST00000067843	protein_coding	principal3	14	-1	64949847	2931
ENSMUSG00000102881	TEC	Gm3807	ENSMUST00000193520	TEC		11	1	120581670	1168
ENSMUSG00000058579	protein_coding	Cela2a	ENSMUST00000127962	retained_intron		4	-1	141819202	468
ENSMUSG00000098837	processed_pseudogene	Gm20111	ENSMUST00000184830	processed_pseudogene		14	1	64839100	319
ENSMUSG00000061411	protein_coding	Nol4l	ENSMUST00000137553	processed_transcript		2	-1	153483826	587
ENSMUSG00000039763	protein_coding	Dnajc28	ENSMUST00000049244	protein_coding	alternative2	16	-1	91618999	3368
ENSMUSG00000116081	TEC	Gm49593	ENSMUST00000229365	TEC		15	-1	79482674	2448
ENSMUSG00000022790	protein_coding	Igsf11	ENSMUST00000023478	protein_coding	principal1	16	1	38902316	3443
ENSMUSG00000092340	unprocessed_pseudogene	Olfr754-ps1	ENSMUST00000173181	unprocessed_pseudogene		17	1	37249430	911
ENSMUSG00000030222	protein_coding	Rerg	ENSMUST00000117919	protein_coding	principal1	6	-1	137169732	2262
ENSMUSG00000022790	protein_coding	Igsf11	ENSMUST00000210471	processed_transcript		16	1	38902508	921
ENSMUSG00000073490	protein_coding	Ifi207	ENSMUST00000042610	protein_coding	principal2	1	-1	173741747	3422
ENSMUSG00000061411	protein_coding	Nol4l	ENSMUST00000129385	processed_transcript		2	-1	153492517	2398
ENSMUSG00000109589	antisense	Gm45267	ENSMUST00000211028	antisense		8	1	27159828	522
ENSMUSG00000086175	antisense	Gm15802	ENSMUST00000209595	antisense		16	1	38828906	1094
ENSMUSG00000061411	protein_coding	Nol4l	ENSMUST00000156786	processed_transcript		2	-1	153479726	645
ENSMUSG00000082283	processed_pseudogene	Gm14472	ENSMUST00000119815	processed_pseudogene		2	1	153413849	282
ENSMUSG00000097262	antisense	4933416M07Rik	ENSMUST00000181424	antisense		8	1	27142910	624
ENSMUSG00000086175	antisense	Gm15802	ENSMUST00000148657	antisense		16	1	38828908	209
ENSMUSG00000073490	protein_coding	Ifi207	ENSMUST00000127730	protein_coding	alternative2	1	-1	173741747	3145
ENSMUSG00000109719	TEC	Gm45266	ENSMUST00000210111	TEC		8	-1	27171012	2173
ENSMUSG00000092591	processed_transcript	Gm20429	ENSMUST00000172477	retained_intron		17	1	37246961	686
ENSMUSG00000039763	protein_coding	Dnajc28	ENSMUST00000143058	protein_coding		16	-1	91618991	947
ENSMUSG00000092591	processed_transcript	Gm20429	ENSMUST00000174168	antisense		17	1	37248350	820
ENSMUSG00000039763	protein_coding	Dnajc28	ENSMUST00000133731	protein_coding		16	-1	91619026	387
ENSMUSG00000030222	protein_coding	Rerg	ENSMUST00000119610	protein_coding		6	-1	137169685	890
ENSMUSG00000023951	protein_coding	Vegfa	ENSMUST00000071648	protein_coding		17	-1	46032369	3451
ENSMUSG00000025081	protein_coding	Tdrd1	ENSMUST00000111606	protein_coding	principal1	19	1	56826209	4914
ENSMUSG00000067571	protein_coding	Ms4a15	ENSMUST00000087923	protein_coding	principal1	19	-1	10993250	1713
ENSMUSG00000063660	protein_coding	Olfr98	ENSMUST00000080759	protein_coding	principal1	17	-1	37263749	1039
ENSMUSG00000030222	protein_coding	Rerg	ENSMUST00000203003	protein_coding		6	-1	137140063	391
ENSMUSG00000039763	protein_coding	Dnajc28	ENSMUST00000169982	protein_coding	principal4	16	-1	91618999	3535
ENSMUSG00000025081	protein_coding	Tdrd1	ENSMUST00000078723	protein_coding	principal1	19	1	56826275	4887
ENSMUSG00000067571	protein_coding	Ms4a15	ENSMUST00000145110	protein_coding		19	-1	10993181	391
ENSMUSG00000067571	protein_coding	Ms4a15	ENSMUST00000144485	protein_coding		19	-1	10993230	388
ENSMUSG00000030222	protein_coding	Rerg	ENSMUST00000149100	protein_coding		6	-1	137169708	635
ENSMUSG00000052146	protein_coding	Rps10	ENSMUST00000114882	protein_coding	principal1	17	-1	27635545	887
ENSMUSG00000085796	lincRNA	4933406D12Rik	ENSMUST00000147212	lincRNA		2	1	146542931	737
ENSMUSG00000030060	protein_coding	Hmces	ENSMUST00000032141	protein_coding	principal1	6	1	87913935	1464
ENSMUSG00000025081	protein_coding	Tdrd1	ENSMUST00000121249	protein_coding	principal1	19	1	56826286	5047
ENSMUSG00000107567	TEC	4930480K02Rik	ENSMUST00000203679	TEC		6	-1	137146929	1054
ENSMUSG00000081180	processed_pseudogene	Gm7212	ENSMUST00000120817	processed_pseudogene		X	-1	48303223	348
ENSMUSG00000115185	processed_pseudogene	Gm18715	ENSMUST00000226984	processed_pseudogene		15	1	5714034	270
ENSMUSG00000023951	protein_coding	Vegfa	ENSMUST00000150327	retained_intron		17	-1	46024864	852
ENSMUSG00000115106	processed_pseudogene	Gm8043	ENSMUST00000228443	processed_pseudogene		15	1	5866235	859
ENSMUSG00000052146	protein_coding	Rps10	ENSMUST00000025052	protein_coding		17	-1	27635240	522
ENSMUSG00000025081	protein_coding	Tdrd1	ENSMUST00000111604	protein_coding	principal1	19	1	56830712	5187
ENSMUSG00000026893	protein_coding	Gca	ENSMUST00000028257	protein_coding	principal1	2	1	62664285	3330
ENSMUSG00000048824	lincRNA	Gm568	ENSMUST00000135777	lincRNA		4	-1	47010781	506
ENSMUSG00000052146	protein_coding	Rps10	ENSMUST00000114881	protein_coding	principal1	17	-1	27636669	644
ENSMUSG00000063506	protein_coding	Arhgap22	ENSMUST00000111956	protein_coding	principal1	14	1	33216823	2596
ENSMUSG00000030060	protein_coding	Hmces	ENSMUST00000204614	processed_transcript		6	1	87913950	902
ENSMUSG00000052146	protein_coding	Rps10	ENSMUST00000155071	protein_coding		17	-1	27635228	712
ENSMUSG00000026893	protein_coding	Gca	ENSMUST00000148083	processed_transcript		2	1	62686198	382
ENSMUSG00000030060	protein_coding	Hmces	ENSMUST00000132651	processed_transcript		6	1	87913958	567
ENSMUSG00000052146	protein_coding	Rps10	ENSMUST00000150763	retained_intron		17	-1	27634254	878
ENSMUSG00000114495	unprocessed_pseudogene	Gm5664	ENSMUST00000224321	unprocessed_pseudogene		13	-1	61303414	1012
ENSMUSG00000030060	protein_coding	Hmces	ENSMUST00000204232	nonsense_mediated_decay		6	1	87913979	513
ENSMUSG00000085029	antisense	Gm13569	ENSMUST00000137221	antisense		2	1	62809187	574
ENSMUSG00000058579	protein_coding	Cela2a	ENSMUST00000102481	protein_coding	principal1	4	-1	141826160	1070
ENSMUSG00000063506	protein_coding	Arhgap22	ENSMUST00000131086	protein_coding		14	1	33250390	711
ENSMUSG00000030060	protein_coding	Hmces	ENSMUST00000113606	protein_coding	principal1	6	1	87914306	1572
ENSMUSG00000023047	protein_coding	Amhr2	ENSMUST00000023809	protein_coding	principal1	15	1	102445367	1938
ENSMUSG00000023951	protein_coding	Vegfa	ENSMUST00000142351	protein_coding		17	-1	46032369	1973
ENSMUSG00000030060	protein_coding	Hmces	ENSMUST00000124551	processed_transcript		6	1	87917924	672
ENSMUSG00000052146	protein_coding	Rps10	ENSMUST00000145226	retained_intron		17	-1	27635229	753
ENSMUSG00000058579	protein_coding	Cela2a	ENSMUST00000155826	retained_intron		4	-1	141826001	732
ENSMUSG00000030060	protein_coding	Hmces	ENSMUST00000148914	retained_intron		6	1	87932993	882
ENSMUSG00000052146	protein_coding	Rps10	ENSMUST00000152982	protein_coding		17	-1	27635244	822
ENSMUSG00000108349	processed_pseudogene	Gm18599	ENSMUST00000206729	processed_pseudogene		7	-1	114699644	1125
ENSMUSG00000023047	protein_coding	Amhr2	ENSMUST00000229278	protein_coding		15	1	102445436	1735
ENSMUSG00000052146	protein_coding	Rps10	ENSMUST00000178774	protein_coding	principal1	17	-1	27634475	498
ENSMUSG00000023931	protein_coding	Efhb	ENSMUST00000024725	protein_coding	principal1	17	-1	53463321	2661
ENSMUSG00000023951	protein_coding	Vegfa	ENSMUST00000133605	retained_intron		17	-1	46024881	874
ENSMUSG00000023047	protein_coding	Amhr2	ENSMUST00000229566	protein_coding		15	1	102445448	209
ENSMUSG00000114947	processed_pseudogene	Gm18577	ENSMUST00000225055	processed_pseudogene		14	1	19529679	1860
ENSMUSG00000097763	antisense	Gm26636	ENSMUST00000181696	antisense		6	-1	87914459	1115
ENSMUSG00000063506	protein_coding	Arhgap22	ENSMUST00000137590	processed_transcript		14	1	33306118	2238
ENSMUSG00000103095	processed_pseudogene	Gm37557	ENSMUST00000191640	processed_pseudogene		3	1	29771284	139
ENSMUSG00000023951	protein_coding	Vegfa	ENSMUST00000143985	retained_intron		17	-1	46021372	550
ENSMUSG00000063506	protein_coding	Arhgap22	ENSMUST00000111955	protein_coding		14	1	33319703	2148
ENSMUSG00000023047	protein_coding	Amhr2	ENSMUST00000162893	protein_coding		15	1	102452159	611
ENSMUSG00000023931	protein_coding	Efhb	ENSMUST00000233544	nonsense_mediated_decay		17	-1	53463306	3656
ENSMUSG00000023951	protein_coding	Vegfa	ENSMUST00000113520	protein_coding	principal1	17	-1	46031356	654
ENSMUSG00000063506	protein_coding	Arhgap22	ENSMUST00000140711	protein_coding		14	1	33351312	467
ENSMUSG00000086583	transcribed_processed_pseudogene	Gm15500	ENSMUST00000071641	processed_transcript		7	-1	114706235	1019
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000033908	retained_intron		8	1	11728177	3221
ENSMUSG00000023047	protein_coding	Amhr2	ENSMUST00000161376	retained_intron		15	1	102452323	364
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000209686	retained_intron		8	1	11758317	2205
ENSMUSG00000086583	transcribed_processed_pseudogene	Gm15500	ENSMUST00000071523	transcribed_processed_pseudogene		7	-1	114706163	894
ENSMUSG00000063506	protein_coding	Arhgap22	ENSMUST00000140166	retained_intron		14	1	33362297	437
ENSMUSG00000023951	protein_coding	Vegfa	ENSMUST00000142321	retained_intron		17	-1	46024802	640
ENSMUSG00000023951	protein_coding	Vegfa	ENSMUST00000113519	protein_coding		17	-1	46031356	513
ENSMUSG00000063506	protein_coding	Arhgap22	ENSMUST00000132659	retained_intron		14	1	33362376	198
ENSMUSG00000115597	antisense	Gm49030	ENSMUST00000226933	antisense		14	-1	33220931	674
ENSMUSG00000102574	lincRNA	Gm33206	ENSMUST00000193544	lincRNA		3	-1	29893177	454
ENSMUSG00000023951	protein_coding	Vegfa	ENSMUST00000146149	retained_intron		17	-1	46031356	463
ENSMUSG00000087639	antisense	Gm15512	ENSMUST00000137359	antisense		14	-1	33370143	2257
ENSMUSG00000102590	lincRNA	Mannr	ENSMUST00000193549	lincRNA		3	1	29891014	1438
ENSMUSG00000090782	TR_J_pseudogene	Traj60	ENSMUST00000167781	TR_J_pseudogene		14	1	54155933	54
ENSMUSG00000096800	processed_pseudogene	Gm4725	ENSMUST00000151048	processed_pseudogene		X	1	4553787	587
ENSMUSG00000106759	unprocessed_pseudogene	AC120011.1	ENSMUST00000202147	unprocessed_pseudogene		5	1	151635991	744
ENSMUSG00000076874	TR_J_gene	Traj59	ENSMUST00000197589	TR_J_gene	principal1	14	1	54156133	62
ENSMUSG00000062232	protein_coding	Rapgef2	ENSMUST00000118100	protein_coding		3	-1	79144977	6573
ENSMUSG00000076874	TR_J_gene	Traj59	ENSMUST00000103686	processed_transcript		14	1	54156133	64
ENSMUSG00000030269	protein_coding	Mtmr14	ENSMUST00000113146	protein_coding	principal2	6	1	113237843	2676
ENSMUSG00000092036	protein_coding	Gm2244	ENSMUST00000164372	protein_coding	principal1	14	-1	19549963	1506
ENSMUSG00000062232	protein_coding	Rapgef2	ENSMUST00000118340	protein_coding		3	-1	79145875	6544
ENSMUSG00000076875	TR_J_gene	Traj58	ENSMUST00000103687	TR_J_gene	principal1	14	1	54157280	63
ENSMUSG00000102884	processed_pseudogene	Gm37281	ENSMUST00000192412	processed_pseudogene		3	1	29926536	439
ENSMUSG00000025134	protein_coding	Alyref	ENSMUST00000026125	protein_coding	principal1	11	-1	120598365	3527
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000117488	protein_coding		10	1	81257299	1980
ENSMUSG00000076876	TR_J_gene	Traj57	ENSMUST00000196977	TR_J_gene	principal1	14	1	54158507	63
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000105328	protein_coding	alternative1	10	1	81257299	2228
ENSMUSG00000062232	protein_coding	Rapgef2	ENSMUST00000195708	protein_coding	principal1	3	-1	79286517	6964
ENSMUSG00000025134	protein_coding	Alyref	ENSMUST00000155325	processed_transcript		11	-1	120595657	648
ENSMUSG00000076876	TR_J_gene	Traj57	ENSMUST00000103688	processed_transcript		14	1	54158505	65
ENSMUSG00000061959	protein_coding	Ces1e	ENSMUST00000034173	protein_coding	principal2	8	-1	93229619	2073
ENSMUSG00000025134	protein_coding	Alyref	ENSMUST00000156685	retained_intron		11	-1	120598231	711
ENSMUSG00000076877	TR_J_gene	Traj56	ENSMUST00000103689	TR_J_gene	principal1	14	1	54159263	63
ENSMUSG00000080870	processed_pseudogene	Gm14111	ENSMUST00000119851	processed_pseudogene		2	-1	146755705	999
ENSMUSG00000063663	protein_coding	Brwd3	ENSMUST00000150434	protein_coding	principal1	X	-1	108834348	11619
ENSMUSG00000044017	protein_coding	Adgrd1	ENSMUST00000056617	protein_coding	principal3	5	1	129096750	5163
ENSMUSG00000062232	protein_coding	Rapgef2	ENSMUST00000152275	retained_intron		3	-1	79173198	3486
ENSMUSG00000091005	TR_J_pseudogene	Traj55	ENSMUST00000170585	TR_J_pseudogene		14	1	54161439	63
ENSMUSG00000087618	lincRNA	Gm14114	ENSMUST00000139345	lincRNA		2	-1	146839732	287
ENSMUSG00000062232	protein_coding	Rapgef2	ENSMUST00000124647	processed_transcript		3	-1	79173300	454
ENSMUSG00000091326	TR_J_pseudogene	Traj54	ENSMUST00000165071	TR_J_pseudogene		14	1	54161990	54
ENSMUSG00000061959	protein_coding	Ces1e	ENSMUST00000176282	protein_coding	alternative2	8	-1	93229618	1883
ENSMUSG00000023048	protein_coding	Prr13	ENSMUST00000164938	protein_coding		15	1	102459028	363
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000128576	nonsense_mediated_decay		10	1	81257299	2599
ENSMUSG00000044017	protein_coding	Adgrd1	ENSMUST00000155590	retained_intron		5	1	129096757	3665
ENSMUSG00000062232	protein_coding	Rapgef2	ENSMUST00000136126	retained_intron		3	-1	79181340	3837
ENSMUSG00000076878	TR_J_gene	Traj53	ENSMUST00000103690	TR_J_gene	principal1	14	1	54162644	66
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000121205	protein_coding	principal4	10	1	81257305	1841
ENSMUSG00000061959	protein_coding	Ces1e	ENSMUST00000175983	retained_intron		8	-1	93219432	718
ENSMUSG00000104585	antisense	4921511C10Rik	ENSMUST00000200412	antisense		3	1	79212919	1463
ENSMUSG00000044017	protein_coding	Adgrd1	ENSMUST00000156437	protein_coding	alternative2	5	1	129096757	4141
ENSMUSG00000031216	protein_coding	Stard8	ENSMUST00000036606	protein_coding	principal1	X	1	99042581	4963
ENSMUSG00000076879	TR_J_gene	Traj52	ENSMUST00000103691	TR_J_gene	principal1	14	1	54165316	66
ENSMUSG00000110659	unprocessed_pseudogene	Gm45727	ENSMUST00000212886	unprocessed_pseudogene		8	-1	93251175	572
ENSMUSG00000030269	protein_coding	Mtmr14	ENSMUST00000142938	nonsense_mediated_decay		6	1	113237851	1661
ENSMUSG00000060419	processed_pseudogene	Rps16-ps2	ENSMUST00000140155	processed_pseudogene		5	-1	129128517	441
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000150605	retained_intron		10	1	81257342	2983
ENSMUSG00000031216	protein_coding	Stard8	ENSMUST00000149999	protein_coding		X	1	99003248	631
ENSMUSG00000076880	TR_J_pseudogene	Traj51	ENSMUST00000103692	TR_J_pseudogene		14	1	54166239	43
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000126720	retained_intron		10	1	81257448	1075
ENSMUSG00000114890	processed_pseudogene	Tpi-rs9	ENSMUST00000223705	processed_pseudogene		14	1	16946659	775
ENSMUSG00000035778	protein_coding	Ggta1	ENSMUST00000079424	protein_coding	alternative2	2	-1	35432633	3254
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000130282	protein_coding		10	1	81257830	495
ENSMUSG00000030269	protein_coding	Mtmr14	ENSMUST00000129883	nonsense_mediated_decay		6	1	113237897	2531
ENSMUSG00000031216	protein_coding	Stard8	ENSMUST00000145820	processed_transcript		X	1	99043984	468
ENSMUSG00000076881	TR_J_gene	Traj50	ENSMUST00000103693	TR_J_gene	principal1	14	1	54167590	63
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000120265	protein_coding	principal4	10	1	81257918	1618
ENSMUSG00000030269	protein_coding	Mtmr14	ENSMUST00000156141	protein_coding		6	1	113239471	642
ENSMUSG00000031216	protein_coding	Stard8	ENSMUST00000127361	processed_transcript		X	1	99068608	759
ENSMUSG00000030269	protein_coding	Mtmr14	ENSMUST00000144976	nonsense_mediated_decay		6	1	113254099	570
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000151660	retained_intron		10	1	81258215	1761
ENSMUSG00000076882	TR_J_gene	Traj49	ENSMUST00000199452	TR_J_gene	principal1	14	1	54168686	62
ENSMUSG00000076882	TR_J_gene	Traj49	ENSMUST00000103694	processed_transcript		14	1	54168686	59
ENSMUSG00000030269	protein_coding	Mtmr14	ENSMUST00000203385	nonsense_mediated_decay		6	1	113255832	575
ENSMUSG00000004933	protein_coding	Matk	ENSMUST00000148735	retained_intron		10	1	81261170	860
ENSMUSG00000030269	protein_coding	Mtmr14	ENSMUST00000137772	protein_coding	alternative2	6	1	113260625	893
ENSMUSG00000111864	processed_pseudogene	Rpl26-ps6	ENSMUST00000216693	processed_pseudogene		9	1	43217122	434
ENSMUSG00000037827	processed_pseudogene	Gm5884	ENSMUST00000036712	processed_pseudogene		6	1	128644913	1479
ENSMUSG00000107831	processed_pseudogene	Gm44420	ENSMUST00000203669	processed_pseudogene		6	-1	128649065	490
ENSMUSG00000076883	TR_J_gene	Traj48	ENSMUST00000200046	TR_J_gene	principal1	14	1	54169808	61
ENSMUSG00000030269	protein_coding	Mtmr14	ENSMUST00000148523	nonsense_mediated_decay		6	1	113265974	876
ENSMUSG00000076883	TR_J_gene	Traj48	ENSMUST00000103695	processed_transcript		14	1	54169809	60
ENSMUSG00000105216	TR_J_gene	Traj47	ENSMUST00000197949	TR_J_gene	principal1	14	1	54171800	57
ENSMUSG00000030269	protein_coding	Mtmr14	ENSMUST00000134945	protein_coding		6	1	113266005	1205
ENSMUSG00000005968	protein_coding	Tuft1	ENSMUST00000006123	protein_coding	principal3	3	-1	94658871	2631
ENSMUSG00000094088	IG_V_gene	Ighv1-64	ENSMUST00000103535	IG_V_gene	principal1	12	-1	115508031	405
ENSMUSG00000016206	protein_coding	H2-M3	ENSMUST00000038580	protein_coding	principal1	17	1	37270220	1438
ENSMUSG00000030269	protein_coding	Mtmr14	ENSMUST00000151149	protein_coding		6	1	113269549	930
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000166920	protein_coding	alternative2	2	1	26581056	1391
ENSMUSG00000031488	protein_coding	Rab11fip1	ENSMUST00000054212	protein_coding	principal3	8	-1	27174646	7965
ENSMUSG00000063663	protein_coding	Brwd3	ENSMUST00000041866	nonsense_mediated_decay		X	-1	108834372	5839
ENSMUSG00000023048	protein_coding	Prr13	ENSMUST00000023810	protein_coding	principal1	15	1	102459175	1224
ENSMUSG00000035778	protein_coding	Ggta1	ENSMUST00000113002	protein_coding	alternative2	2	-1	35461266	3391
ENSMUSG00000005968	protein_coding	Tuft1	ENSMUST00000196733	protein_coding	alternative1	3	-1	94658872	2555
ENSMUSG00000063663	protein_coding	Brwd3	ENSMUST00000144521	nonsense_mediated_decay		X	-1	108834372	5740
ENSMUSG00000090194	antisense	Gm16161	ENSMUST00000162239	antisense		6	-1	113276930	290
ENSMUSG00000107425	processed_pseudogene	Gm44216	ENSMUST00000203942	processed_pseudogene		6	1	128658110	157
ENSMUSG00000055891	protein_coding	Ubl4b	ENSMUST00000052853	protein_coding	principal1	3	-1	107555073	1387
ENSMUSG00000023048	protein_coding	Prr13	ENSMUST00000164957	protein_coding	principal1	15	1	102459202	1055
ENSMUSG00000030363	unprocessed_pseudogene	Clec2j	ENSMUST00000203658	unprocessed_pseudogene		6	-1	128661820	606
ENSMUSG00000005968	protein_coding	Tuft1	ENSMUST00000196655	protein_coding		3	-1	94658800	2156
ENSMUSG00000035778	protein_coding	Ggta1	ENSMUST00000113001	protein_coding	alternative2	2	-1	35461249	3340
ENSMUSG00000063663	protein_coding	Brwd3	ENSMUST00000134434	retained_intron		X	-1	108834340	1654
ENSMUSG00000035778	protein_coding	Ggta1	ENSMUST00000102794	protein_coding	principal3	2	-1	35461449	3606
ENSMUSG00000005968	protein_coding	Tuft1	ENSMUST00000198456	retained_intron		3	-1	94615301	610
ENSMUSG00000031488	protein_coding	Rab11fip1	ENSMUST00000033878	protein_coding	alternative2	8	-1	27174646	3217
ENSMUSG00000030363	unprocessed_pseudogene	Clec2j	ENSMUST00000032517	unprocessed_pseudogene		6	-1	128657032	515
ENSMUSG00000005968	protein_coding	Tuft1	ENSMUST00000200407	protein_coding		3	-1	94658800	539
ENSMUSG00000063663	protein_coding	Brwd3	ENSMUST00000101283	protein_coding		X	-1	108834346	1066
ENSMUSG00000035778	protein_coding	Ggta1	ENSMUST00000131745	protein_coding		2	-1	35442101	701
ENSMUSG00000076884	TR_J_gene	Traj46	ENSMUST00000103696	TR_J_gene	principal1	14	1	54172336	63
ENSMUSG00000023048	protein_coding	Prr13	ENSMUST00000171245	protein_coding	principal1	15	1	102459232	1353
ENSMUSG00000106325	IG_V_pseudogene	Ighv8-10	ENSMUST00000199579	IG_V_pseudogene		12	-1	115519782	358
ENSMUSG00000031488	protein_coding	Rab11fip1	ENSMUST00000209377	protein_coding		8	-1	27174646	3769
ENSMUSG00000005968	protein_coding	Tuft1	ENSMUST00000196496	nonsense_mediated_decay		3	-1	94658803	342
ENSMUSG00000035778	protein_coding	Ggta1	ENSMUST00000130913	processed_transcript		2	-1	35445833	341
ENSMUSG00000104340	lincRNA	Gm10522	ENSMUST00000194503	lincRNA		1	1	170981944	1163
ENSMUSG00000040532	protein_coding	Abhd11	ENSMUST00000111216	protein_coding		5	1	135009152	972
ENSMUSG00000118474	processed_pseudogene	Gm10972	ENSMUST00000238219	processed_pseudogene		3	1	94643098	499
ENSMUSG00000035778	protein_coding	Ggta1	ENSMUST00000149442	processed_transcript		2	-1	35463231	1006
ENSMUSG00000031488	protein_coding	Rab11fip1	ENSMUST00000210187	processed_transcript		8	-1	27154476	637
ENSMUSG00000023048	protein_coding	Prr13	ENSMUST00000164688	protein_coding	principal1	15	1	102460083	1020
ENSMUSG00000035778	protein_coding	Ggta1	ENSMUST00000044255	protein_coding	principal3	2	-1	35423327	1221
ENSMUSG00000076885	TR_J_gene	Traj45	ENSMUST00000103697	TR_J_gene	principal1	14	1	54172828	63
ENSMUSG00000031488	protein_coding	Rab11fip1	ENSMUST00000210919	processed_transcript		8	-1	27174627	1307
ENSMUSG00000035778	protein_coding	Ggta1	ENSMUST00000164889	protein_coding	alternative2	2	-1	35423327	1185
ENSMUSG00000101051	antisense	1700100L14Rik	ENSMUST00000187681	antisense		13	1	70573241	688
ENSMUSG00000031488	protein_coding	Rab11fip1	ENSMUST00000211646	processed_transcript		8	-1	27174641	2321
ENSMUSG00000106856	TEC	Gm43761	ENSMUST00000202132	TEC		2	-1	35437311	991
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000100290	protein_coding	alternative2	2	1	26583864	1348
ENSMUSG00000076886	TR_J_gene	Traj44	ENSMUST00000103698	TR_J_gene	principal1	14	1	54173690	61
ENSMUSG00000083129	processed_pseudogene	Gm12210	ENSMUST00000118245	processed_pseudogene		11	-1	52487310	153
ENSMUSG00000101051	antisense	1700100L14Rik	ENSMUST00000189028	antisense		13	1	70573280	762
ENSMUSG00000112983	lincRNA	Gm32939	ENSMUST00000222336	lincRNA		13	1	43530220	843
ENSMUSG00000076887	TR_J_gene	Traj43	ENSMUST00000103699	TR_J_gene	principal1	14	1	54174742	57
ENSMUSG00000034525	protein_coding	Ice1	ENSMUST00000222738	processed_transcript		13	-1	70573193	596
ENSMUSG00000027498	protein_coding	Cstf1	ENSMUST00000151511	protein_coding		2	1	172370681	674
ENSMUSG00000023175	protein_coding	Bsg	ENSMUST00000179781	protein_coding		10	1	79704491	1261
ENSMUSG00000021240	protein_coding	Abcd4	ENSMUST00000222942	retained_intron		12	-1	84604052	2589
ENSMUSG00000003992	protein_coding	Ssbp2	ENSMUST00000004094	protein_coding	principal4	13	1	91461050	3957
ENSMUSG00000027301	protein_coding	Oxt	ENSMUST00000028764	protein_coding	principal1	2	1	130576173	537
ENSMUSG00000041789	lincRNA	2700046A07Rik	ENSMUST00000067450	lincRNA		18	-1	62756315	2101
ENSMUSG00000023175	protein_coding	Bsg	ENSMUST00000067036	protein_coding	principal1	10	1	79704500	1526
ENSMUSG00000045036	protein_coding	Tmem232	ENSMUST00000233328	protein_coding		17	-1	65517229	2378
ENSMUSG00000056692	protein_coding	Ilrun	ENSMUST00000114863	protein_coding	principal3	17	-1	27820625	3892
ENSMUSG00000027498	protein_coding	Cstf1	ENSMUST00000116375	protein_coding	principal1	2	1	172370734	3451
ENSMUSG00000003992	protein_coding	Ssbp2	ENSMUST00000042122	protein_coding	alternative1	13	1	91461091	1633
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000109607	protein_coding	principal1	2	-1	156111939	3441
ENSMUSG00000091512	protein_coding	Lamtor3	ENSMUST00000197064	protein_coding	principal1	3	1	137918506	733
ENSMUSG00000040532	protein_coding	Abhd11	ENSMUST00000046999	protein_coding	principal1	5	1	135009299	1493
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000102907	protein_coding	alternative2	2	1	26583880	1372
ENSMUSG00000023175	protein_coding	Bsg	ENSMUST00000179201	processed_transcript		10	1	79704508	564
ENSMUSG00000041789	lincRNA	2700046A07Rik	ENSMUST00000048109	lincRNA		18	-1	62756347	809
ENSMUSG00000034525	protein_coding	Ice1	ENSMUST00000223102	protein_coding		13	-1	70596253	438
ENSMUSG00000091512	protein_coding	Lamtor3	ENSMUST00000197798	retained_intron		3	1	137918526	989
ENSMUSG00000003992	protein_coding	Ssbp2	ENSMUST00000138488	nonsense_mediated_decay		13	1	91461127	475
ENSMUSG00000023175	protein_coding	Bsg	ENSMUST00000178383	protein_coding		10	1	79704570	921
ENSMUSG00000032014	protein_coding	Oaf	ENSMUST00000034512	protein_coding	principal1	9	-1	43239911	2526
ENSMUSG00000040532	protein_coding	Abhd11	ENSMUST00000201890	protein_coding		5	1	135009413	476
ENSMUSG00000023175	protein_coding	Bsg	ENSMUST00000105381	protein_coding		10	1	79709598	1240
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000139801	nonsense_mediated_decay		2	1	26583905	1865
ENSMUSG00000034525	protein_coding	Ice1	ENSMUST00000222274	nonsense_mediated_decay		13	-1	70596244	755
ENSMUSG00000003992	protein_coding	Ssbp2	ENSMUST00000137493	retained_intron		13	1	91461160	2451
ENSMUSG00000032014	protein_coding	Oaf	ENSMUST00000213286	protein_coding		9	-1	43223974	472
ENSMUSG00000023175	protein_coding	Bsg	ENSMUST00000180235	retained_intron		10	1	79710105	836
ENSMUSG00000003992	protein_coding	Ssbp2	ENSMUST00000144659	retained_intron		13	1	91461163	822
ENSMUSG00000032014	protein_coding	Oaf	ENSMUST00000215387	retained_intron		9	-1	43225092	357
ENSMUSG00000003992	protein_coding	Ssbp2	ENSMUST00000231481	protein_coding		13	1	91461170	750
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000239075	protein_coding	alternative2	2	1	26586630	1163
ENSMUSG00000091512	protein_coding	Lamtor3	ENSMUST00000168345	protein_coding	principal1	3	1	137918526	1295
ENSMUSG00000034525	protein_coding	Ice1	ENSMUST00000220637	nonsense_mediated_decay		13	-1	70602565	2195
ENSMUSG00000023832	protein_coding	Acat2	ENSMUST00000007005	protein_coding	principal1	17	-1	12960747	2250
ENSMUSG00000003992	protein_coding	Ssbp2	ENSMUST00000141381	retained_intron		13	1	91461181	350
ENSMUSG00000076888	TR_J_gene	Traj42	ENSMUST00000103700	TR_J_gene	principal1	14	1	54175773	64
ENSMUSG00000003992	protein_coding	Ssbp2	ENSMUST00000133984	processed_transcript		13	1	91539343	687
ENSMUSG00000023832	protein_coding	Acat2	ENSMUST00000233792	protein_coding		17	-1	12960720	1931
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000149460	processed_transcript		2	1	26586661	369
ENSMUSG00000003992	protein_coding	Ssbp2	ENSMUST00000137658	retained_intron		13	1	91670437	880
ENSMUSG00000056692	protein_coding	Ilrun	ENSMUST00000114859	protein_coding	alternative2	17	-1	27820542	3573
ENSMUSG00000074749	protein_coding	Kiz	ENSMUST00000099278	protein_coding	principal1	2	1	146855864	2183
ENSMUSG00000023832	protein_coding	Acat2	ENSMUST00000159697	protein_coding		17	-1	12960371	1800
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000145575	protein_coding		2	1	26586672	541
ENSMUSG00000040532	protein_coding	Abhd11	ENSMUST00000154469	protein_coding		5	1	135009456	1473
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000109608	protein_coding	principal1	2	-1	156111943	3492
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000173920	protein_coding		2	1	26586689	484
ENSMUSG00000091512	protein_coding	Lamtor3	ENSMUST00000196632	processed_transcript		3	1	137918562	675
ENSMUSG00000074749	protein_coding	Kiz	ENSMUST00000156232	protein_coding		2	1	146855909	636
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000150404	protein_coding	alternative2	2	1	26588543	892
ENSMUSG00000056692	protein_coding	Ilrun	ENSMUST00000233131	protein_coding		17	-1	27820648	1745
ENSMUSG00000050212	protein_coding	Eva1b	ENSMUST00000052876	protein_coding	principal1	4	1	126147744	1689
ENSMUSG00000023832	protein_coding	Acat2	ENSMUST00000159358	processed_transcript		17	-1	12956345	827
ENSMUSG00000035297	protein_coding	Cops4	ENSMUST00000045993	protein_coding	principal1	5	1	100518309	1755
ENSMUSG00000091512	protein_coding	Lamtor3	ENSMUST00000197817	protein_coding		3	1	137918572	447
ENSMUSG00000040532	protein_coding	Abhd11	ENSMUST00000123227	nonsense_mediated_decay		5	1	135009691	1466
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000126513	processed_transcript		2	-1	156074295	541
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000147351	retained_intron		2	1	26589335	989
ENSMUSG00000074749	protein_coding	Kiz	ENSMUST00000135595	retained_intron		2	1	146952883	459
ENSMUSG00000056692	protein_coding	Ilrun	ENSMUST00000233508	protein_coding		17	-1	27820452	1348
ENSMUSG00000091512	protein_coding	Lamtor3	ENSMUST00000200269	retained_intron		3	1	137918844	401
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000174572	retained_intron		2	1	26590520	307
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000079312	protein_coding		2	-1	156111901	1683
ENSMUSG00000040532	protein_coding	Abhd11	ENSMUST00000149778	nonsense_mediated_decay		5	1	135009706	1475
ENSMUSG00000091512	protein_coding	Lamtor3	ENSMUST00000200107	retained_intron		3	1	137924790	788
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000140109	protein_coding		2	-1	156076254	666
ENSMUSG00000091512	protein_coding	Lamtor3	ENSMUST00000200656	retained_intron		3	1	137926175	2726
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000131112	protein_coding		2	1	26590965	521
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000095536	protein_coding	alternative2	12	1	85824673	4150
ENSMUSG00000040532	protein_coding	Abhd11	ENSMUST00000148831	nonsense_mediated_decay		5	1	135009973	731
ENSMUSG00000056692	protein_coding	Ilrun	ENSMUST00000233533	protein_coding		17	-1	27820566	1784
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000174656	protein_coding		2	1	26591029	424
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000184933	retained_intron		2	-1	156076279	822
ENSMUSG00000050212	protein_coding	Eva1b	ENSMUST00000106152	protein_coding	principal1	4	1	126148003	1364
ENSMUSG00000056692	protein_coding	Ilrun	ENSMUST00000075076	protein_coding		17	-1	27820454	1382
ENSMUSG00000035297	protein_coding	Cops4	ENSMUST00000147729	retained_intron		5	1	100518443	2389
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000110220	protein_coding		12	1	85824707	2655
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000147627	nonsense_mediated_decay		2	-1	156111904	1728
ENSMUSG00000056692	protein_coding	Ilrun	ENSMUST00000233035	retained_intron		17	-1	27820481	671
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000152988	protein_coding		2	1	26591434	723
ENSMUSG00000015981	protein_coding	Stk32c	ENSMUST00000016125	protein_coding	principal1	7	-1	139188517	2206
ENSMUSG00000035297	protein_coding	Cops4	ENSMUST00000151414	protein_coding		5	1	100518457	826
ENSMUSG00000050212	protein_coding	Eva1b	ENSMUST00000106150	protein_coding	principal1	4	1	126148532	1144
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000149789	protein_coding		2	1	26591435	683
ENSMUSG00000014603	protein_coding	Alx3	ENSMUST00000014747	protein_coding	principal1	3	1	107595031	1874
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000183733	nonsense_mediated_decay		2	-1	156078160	876
ENSMUSG00000044216	protein_coding	Kcnj4	ENSMUST00000057801	protein_coding	principal1	15	-1	79505241	2152
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000173777	retained_intron		2	1	26591446	845
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000147956	retained_intron		2	-1	156076552	528
ENSMUSG00000029364	protein_coding	Wsb2	ENSMUST00000031309	protein_coding	principal2	5	1	117357304	2421
ENSMUSG00000034525	protein_coding	Ice1	ENSMUST00000043493	protein_coding	principal1	13	-1	70637634	7667
ENSMUSG00000035297	protein_coding	Cops4	ENSMUST00000123069	nonsense_mediated_decay		5	1	100518472	632
ENSMUSG00000074785	protein_coding	Plxnc1	ENSMUST00000099337	protein_coding	principal1	10	-1	94944835	7302
ENSMUSG00000045036	protein_coding	Tmem232	ENSMUST00000233738	protein_coding	alternative2	17	-1	65510053	2352
ENSMUSG00000014603	protein_coding	Alx3	ENSMUST00000233202	protein_coding		3	1	107600436	564
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000174465	processed_transcript		2	1	26592023	491
ENSMUSG00000033420	protein_coding	Antxr1	ENSMUST00000042025	protein_coding	principal2	6	-1	87335764	5253
ENSMUSG00000035297	protein_coding	Cops4	ENSMUST00000146476	protein_coding		5	1	100518737	897
ENSMUSG00000116243	TEC	Gm49552	ENSMUST00000230717	TEC		15	1	79510325	2193
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000074856	protein_coding	principal3	8	1	11758354	4451
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000136296	protein_coding		2	-1	156111965	1316
ENSMUSG00000029364	protein_coding	Wsb2	ENSMUST00000125522	retained_intron		5	1	117357305	3357
ENSMUSG00000074785	protein_coding	Plxnc1	ENSMUST00000218839	processed_transcript		10	-1	94829546	352
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000172683	retained_intron		2	1	26592147	536
ENSMUSG00000015981	protein_coding	Stk32c	ENSMUST00000165870	protein_coding		7	-1	139213307	1883
ENSMUSG00000035297	protein_coding	Cops4	ENSMUST00000123492	nonsense_mediated_decay		5	1	100528640	872
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000238951	protein_coding	principal2	2	1	26581056	1389
ENSMUSG00000034525	protein_coding	Ice1	ENSMUST00000222627	nonsense_mediated_decay		13	-1	70608819	408
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000153634	protein_coding		2	-1	156111909	1057
ENSMUSG00000029364	protein_coding	Wsb2	ENSMUST00000138071	processed_transcript		5	1	117361022	585
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000238983	protein_coding	principal2	2	1	26583864	1388
ENSMUSG00000074785	protein_coding	Plxnc1	ENSMUST00000180514	retained_intron		10	-1	94843808	686
ENSMUSG00000008090	protein_coding	Fgfrl1	ENSMUST00000196222	protein_coding		5	1	108692382	406
ENSMUSG00000026921	protein_coding	Egfl7	ENSMUST00000174211	protein_coding	principal2	2	1	26586630	1163
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000183353	retained_intron		2	-1	156078591	608
ENSMUSG00000008090	protein_coding	Fgfrl1	ENSMUST00000197255	protein_coding		5	1	108694230	438
ENSMUSG00000035297	protein_coding	Cops4	ENSMUST00000123559	retained_intron		5	1	100532242	2154
ENSMUSG00000110303	TEC	Gm45328	ENSMUST00000210942	TEC		7	-1	139213191	917
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000142960	protein_coding		2	-1	156111959	745
ENSMUSG00000029364	protein_coding	Wsb2	ENSMUST00000111959	protein_coding	alternative2	5	1	117363522	1526
ENSMUSG00000025135	protein_coding	Anapc11	ENSMUST00000026128	protein_coding	principal1	11	1	120598421	3229
ENSMUSG00000034525	protein_coding	Ice1	ENSMUST00000222568	nonsense_mediated_decay		13	-1	70637634	3903
ENSMUSG00000074785	protein_coding	Plxnc1	ENSMUST00000181244	nonsense_mediated_decay		10	-1	94871048	716
ENSMUSG00000055561	protein_coding	Spink5	ENSMUST00000069245	protein_coding	principal1	18	1	43963235	4785
ENSMUSG00000033420	protein_coding	Antxr1	ENSMUST00000203131	nonsense_mediated_decay		6	-1	87308388	4725
ENSMUSG00000025135	protein_coding	Anapc11	ENSMUST00000148114	retained_intron		11	1	120598440	1612
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000133921	protein_coding		2	-1	156111909	759
ENSMUSG00000074785	protein_coding	Plxnc1	ENSMUST00000180573	retained_intron		10	-1	94922657	669
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000154889	protein_coding		2	-1	156111863	641
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000098938	protein_coding	alternative1	8	1	11758354	4628
ENSMUSG00000053141	protein_coding	Ptprt	ENSMUST00000109445	protein_coding	principal3	2	-1	162661147	12082
ENSMUSG00000033420	protein_coding	Antxr1	ENSMUST00000204805	protein_coding	alternative2	6	-1	87335724	2156
ENSMUSG00000116029	lincRNA	Gm41414	ENSMUST00000229837	lincRNA		16	1	5306801	710
ENSMUSG00000021240	protein_coding	Abcd4	ENSMUST00000222581	nonsense_mediated_decay		12	-1	84617370	2581
ENSMUSG00000112736	TEC	Gm48718	ENSMUST00000220244	TEC		10	-1	94883792	2482
ENSMUSG00000029364	protein_coding	Wsb2	ENSMUST00000149669	retained_intron		5	1	117375652	600
ENSMUSG00000033420	protein_coding	Antxr1	ENSMUST00000205033	protein_coding	alternative2	6	-1	87335764	3160
ENSMUSG00000074643	protein_coding	Cpne1	ENSMUST00000184152	protein_coding		2	-1	156102628	545
ENSMUSG00000109833	protein_coding	Gm40193	ENSMUST00000209971	protein_coding	principal1	11	-1	70532939	237
ENSMUSG00000114202	processed_pseudogene	Gm18078	ENSMUST00000224816	processed_pseudogene		14	1	16953606	592
ENSMUSG00000029364	protein_coding	Wsb2	ENSMUST00000136895	retained_intron		5	1	117376450	392
ENSMUSG00000033420	protein_coding	Antxr1	ENSMUST00000205089	processed_transcript		6	-1	87270243	591
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000210012	protein_coding		8	1	11758391	732
ENSMUSG00000053141	protein_coding	Ptprt	ENSMUST00000109443	protein_coding	alternative2	2	-1	162661147	12112
ENSMUSG00000047368	protein_coding	Abhd17b	ENSMUST00000235332	protein_coding		19	1	21653185	2249
ENSMUSG00000103285	TEC	Gm37274	ENSMUST00000192167	TEC		2	-1	156086291	1682
ENSMUSG00000114296	processed_pseudogene	Gm18927	ENSMUST00000225472	processed_pseudogene		14	1	17105561	316
ENSMUSG00000030666	protein_coding	Calcb	ENSMUST00000032902	protein_coding	principal2	7	1	114718643	962
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000211409	nonsense_mediated_decay		8	1	11782527	613
ENSMUSG00000114769	processed_pseudogene	Gm48312	ENSMUST00000224880	processed_pseudogene		14	1	17121503	598
ENSMUSG00000045036	protein_coding	Tmem232	ENSMUST00000062161	protein_coding	principal2	17	-1	65540776	2665
ENSMUSG00000025135	protein_coding	Anapc11	ENSMUST00000093140	protein_coding	principal1	11	1	120598532	962
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000110904	protein_coding		8	1	11782641	4038
ENSMUSG00000053141	protein_coding	Ptprt	ENSMUST00000109442	protein_coding	alternative2	2	-1	162661094	7719
ENSMUSG00000102970	TEC	Gm37349	ENSMUST00000194205	TEC		1	1	191597647	624
ENSMUSG00000033420	protein_coding	Antxr1	ENSMUST00000203563	retained_intron		6	-1	87335821	3179
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000239427	protein_coding		8	1	11797454	147
ENSMUSG00000040722	protein_coding	Scamp5	ENSMUST00000046587	protein_coding	principal1	9	-1	57468058	3225
ENSMUSG00000030666	protein_coding	Calcb	ENSMUST00000182816	protein_coding	alternative2	7	1	114718675	706
ENSMUSG00000108143	TEC	Gm44414	ENSMUST00000203660	TEC		6	-1	87334860	2109
ENSMUSG00000045036	protein_coding	Tmem232	ENSMUST00000233117	protein_coding	alternative2	17	-1	65540744	2369
ENSMUSG00000047368	protein_coding	Abhd17b	ENSMUST00000052556	protein_coding	principal1	19	1	21653525	2259
ENSMUSG00000094584	protein_coding	Ms4a18	ENSMUST00000177684	protein_coding	principal1	19	-1	11018031	1453
ENSMUSG00000025135	protein_coding	Anapc11	ENSMUST00000129263	processed_transcript		11	1	120603944	454
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000210287	retained_intron		8	1	11799844	898
ENSMUSG00000107865	TEC	Gm44417	ENSMUST00000203298	TEC		6	-1	87255608	3359
ENSMUSG00000030666	protein_coding	Calcb	ENSMUST00000182044	protein_coding		7	1	114719511	386
ENSMUSG00000053141	protein_coding	Ptprt	ENSMUST00000109441	protein_coding	alternative2	2	-1	162661147	6623
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000154204	retained_intron		8	1	11812362	3355
ENSMUSG00000085042	transcribed_unitary_pseudogene	Abhd11os	ENSMUST00000136022	processed_transcript		5	-1	135013253	604
ENSMUSG00000092556	unprocessed_pseudogene	Olfr755-ps1	ENSMUST00000173568	unprocessed_pseudogene		17	1	37276648	910
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000211510	processed_transcript		8	1	11812651	334
ENSMUSG00000047368	protein_coding	Abhd17b	ENSMUST00000236549	retained_intron		19	1	21680634	1954
ENSMUSG00000053141	protein_coding	Ptprt	ENSMUST00000153770	processed_transcript		2	-1	161800155	608
ENSMUSG00000040722	protein_coding	Scamp5	ENSMUST00000215208	retained_intron		9	-1	57447392	790
ENSMUSG00000085042	transcribed_unitary_pseudogene	Abhd11os	ENSMUST00000154060	processed_transcript		5	-1	135013154	594
ENSMUSG00000031511	protein_coding	Arhgef7	ENSMUST00000151225	retained_intron		8	1	11830238	1761
ENSMUSG00000101264	lincRNA	Gm28347	ENSMUST00000185380	lincRNA		19	-1	11037635	382
ENSMUSG00000085042	transcribed_unitary_pseudogene	Abhd11os	ENSMUST00000222613	transcribed_unitary_pseudogene		5	-1	135012788	363
ENSMUSG00000053141	protein_coding	Ptprt	ENSMUST00000129015	processed_transcript		2	-1	162135451	426
ENSMUSG00000029456	protein_coding	Acad10	ENSMUST00000031412	protein_coding	principal1	5	-1	121660479	3826
ENSMUSG00000117781	protein_coding	Gm17266	ENSMUST00000236689	protein_coding	principal1	18	-1	84836716	2073
ENSMUSG00000110394	processed_pseudogene	Gm18991	ENSMUST00000209225	processed_pseudogene		8	1	11738621	746
ENSMUSG00000059089	protein_coding	Fcgr4	ENSMUST00000078825	protein_coding	principal1	1	1	171018920	1256
ENSMUSG00000045036	protein_coding	Tmem232	ENSMUST00000233279	processed_transcript		17	-1	65484501	1430
ENSMUSG00000059729	protein_coding	Olfr1385	ENSMUST00000216450	processed_transcript		11	1	49489070	3155
ENSMUSG00000061972	protein_coding	Olfr99	ENSMUST00000216328	protein_coding	principal1	17	-1	37283460	1778
ENSMUSG00000040722	protein_coding	Scamp5	ENSMUST00000214256	protein_coding	principal1	9	-1	57468060	1025
ENSMUSG00000059729	protein_coding	Olfr1385	ENSMUST00000214948	protein_coding	principal1	11	1	49489088	4412
ENSMUSG00000093979	protein_coding	Gm2237	ENSMUST00000170694	protein_coding	principal5	14	-1	19585135	2090
ENSMUSG00000045036	protein_coding	Tmem232	ENSMUST00000233493	processed_transcript		17	-1	65436395	1165
ENSMUSG00000061972	protein_coding	Olfr99	ENSMUST00000216370	processed_transcript		17	-1	37283384	1386
ENSMUSG00000085576	protein_coding	Dpy19l2	ENSMUST00000133010	protein_coding	principal1	9	-1	24696293	3442
ENSMUSG00000084919	antisense	Ptprtos	ENSMUST00000151688	antisense		2	1	162390813	630
ENSMUSG00000118338	TEC	Gm50317	ENSMUST00000235635	TEC		19	1	51144749	3286
ENSMUSG00000030058	protein_coding	Copg1	ENSMUST00000113607	protein_coding	principal1	6	1	87887814	4140
ENSMUSG00000107335	TEC	Gm43372	ENSMUST00000202662	TEC		5	-1	135010108	3016
ENSMUSG00000045036	protein_coding	Tmem232	ENSMUST00000086722	protein_coding	principal2	17	-1	65540782	2588
ENSMUSG00000059729	protein_coding	Olfr1385	ENSMUST00000071807	protein_coding	principal1	11	1	49494535	930
ENSMUSG00000093979	protein_coding	Gm2237	ENSMUST00000112595	protein_coding	alternative2	14	-1	19569553	471
ENSMUSG00000061972	protein_coding	Olfr99	ENSMUST00000077585	protein_coding	principal1	17	-1	37280418	918
ENSMUSG00000114562	processed_pseudogene	Gm18080	ENSMUST00000226080	processed_pseudogene		14	1	58240221	614
ENSMUSG00000040722	protein_coding	Scamp5	ENSMUST00000215734	nonsense_mediated_decay		9	-1	57468037	675
ENSMUSG00000076889	TR_J_gene	Traj41	ENSMUST00000103701	TR_J_gene	principal1	14	1	54176271	55
ENSMUSG00000108314	processed_pseudogene	Prkcz2	ENSMUST00000206136	processed_pseudogene		7	-1	27884510	1756
ENSMUSG00000117012	processed_pseudogene	Gm18992	ENSMUST00000232744	processed_pseudogene		17	-1	65396290	553
ENSMUSG00000096546	protein_coding	Smlr1	ENSMUST00000179685	protein_coding	principal1	10	-1	25536267	669
ENSMUSG00000117300	processed_pseudogene	Gm18736	ENSMUST00000233888	processed_pseudogene		17	-1	65438697	570
ENSMUSG00000075010	lincRNA	AW112010	ENSMUST00000238097	lincRNA		19	-1	11055808	625
ENSMUSG00000118641	unprocessed_pseudogene	AC139063.1	ENSMUST00000239484	unprocessed_pseudogene		7	-1	27894118	57
ENSMUSG00000040722	protein_coding	Scamp5	ENSMUST00000213771	nonsense_mediated_decay		9	-1	57467996	544
ENSMUSG00000118055	processed_pseudogene	Gm50129	ENSMUST00000235761	processed_pseudogene		19	1	21729270	476
ENSMUSG00000047995	protein_coding	Cypt4	ENSMUST00000053956	protein_coding	principal1	9	1	24625196	629
ENSMUSG00000117287	lincRNA	Gm36200	ENSMUST00000233284	lincRNA		17	-1	46084266	1327
ENSMUSG00000096546	protein_coding	Smlr1	ENSMUST00000187490	retained_intron		10	-1	25536142	3891
ENSMUSG00000040722	protein_coding	Scamp5	ENSMUST00000215059	protein_coding		9	-1	57467995	418
ENSMUSG00000029456	protein_coding	Acad10	ENSMUST00000111770	protein_coding	principal1	5	-1	121660514	3626
ENSMUSG00000102879	TEC	Gm37135	ENSMUST00000192652	TEC		1	-1	37331504	534
ENSMUSG00000076890	TR_J_gene	Traj40	ENSMUST00000103702	TR_J_gene	principal1	14	1	54177921	61
ENSMUSG00000044170	protein_coding	Olfr1384	ENSMUST00000213776	protein_coding	principal1	11	1	49506724	4437
ENSMUSG00000075010	lincRNA	AW112010	ENSMUST00000099676	lincRNA		19	-1	11050566	770
ENSMUSG00000111282	TEC	Gm47528	ENSMUST00000215445	TEC		9	-1	46242032	2192
ENSMUSG00000117109	processed_pseudogene	Gm19969	ENSMUST00000233497	processed_pseudogene		17	-1	46094671	169
ENSMUSG00000095024	protein_coding	Gm5458	ENSMUST00000096121	protein_coding	principal1	14	-1	19602581	997
ENSMUSG00000044170	protein_coding	Olfr1384	ENSMUST00000060434	protein_coding	principal1	11	1	49513618	1034
ENSMUSG00000007721	protein_coding	Ccdc124	ENSMUST00000007865	protein_coding	principal1	8	-1	70873935	1356
ENSMUSG00000019891	protein_coding	Dcbld1	ENSMUST00000069004	protein_coding	principal1	10	1	52233619	3024
ENSMUSG00000030058	protein_coding	Copg1	ENSMUST00000049966	protein_coding		6	1	87887928	921
ENSMUSG00000089695	processed_pseudogene	Gm15946	ENSMUST00000160654	processed_pseudogene		17	1	12962768	423
ENSMUSG00000021669	protein_coding	Col4a3bp	ENSMUST00000077672	protein_coding	principal3	13	1	96542735	2746
ENSMUSG00000076891	TR_J_gene	Traj39	ENSMUST00000103703	TR_J_gene	principal1	14	1	54179962	63
ENSMUSG00000031209	protein_coding	Heph	ENSMUST00000033553	protein_coding	principal1	X	1	96455359	4743
ENSMUSG00000007721	protein_coding	Ccdc124	ENSMUST00000212680	protein_coding		8	-1	70873383	427
ENSMUSG00000019891	protein_coding	Dcbld1	ENSMUST00000218278	retained_intron		10	1	52233633	4859
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000146676	processed_transcript		1	1	37299865	369
ENSMUSG00000019891	protein_coding	Dcbld1	ENSMUST00000218582	protein_coding		10	1	52233637	2795
ENSMUSG00000021669	protein_coding	Col4a3bp	ENSMUST00000109444	protein_coding	alternative1	13	1	96542735	5285
ENSMUSG00000032080	protein_coding	Apoa4	ENSMUST00000034585	protein_coding	principal1	9	1	46240696	1815
ENSMUSG00000029456	protein_coding	Acad10	ENSMUST00000137789	retained_intron		5	-1	121634897	2071
ENSMUSG00000117671	bidirectional_promoter_lncRNA	Gm50128	ENSMUST00000237173	bidirectional_promoter_lncRNA		18	-1	62922129	1057
ENSMUSG00000037727	protein_coding	Avp	ENSMUST00000046001	protein_coding	principal1	2	-1	130582554	577
ENSMUSG00000098950	protein_coding	Gm28036	ENSMUST00000127956	nonsense_mediated_decay	alternative2	2	-1	156098085	4955
ENSMUSG00000117671	bidirectional_promoter_lncRNA	Gm50128	ENSMUST00000237856	bidirectional_promoter_lncRNA		18	-1	62922101	3226
ENSMUSG00000031209	protein_coding	Heph	ENSMUST00000079322	protein_coding		X	1	96456373	3904
ENSMUSG00000030058	protein_coding	Copg1	ENSMUST00000203240	processed_transcript		6	1	87887940	633
ENSMUSG00000087245	antisense	Gm12126	ENSMUST00000147717	antisense		11	1	36080664	619
ENSMUSG00000074373	antisense	Gm10680	ENSMUST00000156612	antisense		9	-1	46243529	702
ENSMUSG00000098950	protein_coding	Gm28036	ENSMUST00000132494	nonsense_mediated_decay	principal5	2	-1	156111901	5505
ENSMUSG00000021669	protein_coding	Col4a3bp	ENSMUST00000220464	retained_intron		13	1	96542746	1912
ENSMUSG00000114690	lincRNA	Gm33321	ENSMUST00000224843	lincRNA		14	1	58300973	472
ENSMUSG00000022226	protein_coding	Mcpt2	ENSMUST00000015576	protein_coding	principal1	14	1	56042041	1061
ENSMUSG00000029456	protein_coding	Acad10	ENSMUST00000133775	retained_intron		5	-1	121660498	4751
ENSMUSG00000021669	protein_coding	Col4a3bp	ENSMUST00000222434	retained_intron		13	1	96542755	3054
ENSMUSG00000015980	protein_coding	Lrrc27	ENSMUST00000016124	protein_coding	principal3	7	1	139212988	2113
ENSMUSG00000114690	lincRNA	Gm33321	ENSMUST00000225434	lincRNA		14	1	58300982	904
ENSMUSG00000030058	protein_coding	Copg1	ENSMUST00000137717	retained_intron		6	1	87887957	2761
ENSMUSG00000029456	protein_coding	Acad10	ENSMUST00000143187	retained_intron		5	-1	121632779	869
ENSMUSG00000098157	transcribed_processed_pseudogene	Gm9022	ENSMUST00000183285	processed_transcript		14	-1	58879315	483
ENSMUSG00000029456	protein_coding	Acad10	ENSMUST00000137231	processed_transcript		5	-1	121646784	412
ENSMUSG00000021669	protein_coding	Col4a3bp	ENSMUST00000223471	processed_transcript		13	1	96629055	494
ENSMUSG00000028367	protein_coding	Txn1	ENSMUST00000030051	protein_coding	principal1	4	-1	57956411	1051
ENSMUSG00000015980	protein_coding	Lrrc27	ENSMUST00000156768	protein_coding		7	1	139213011	513
ENSMUSG00000098157	transcribed_processed_pseudogene	Gm9022	ENSMUST00000182482	transcribed_processed_pseudogene		14	-1	58880228	992
ENSMUSG00000021669	protein_coding	Col4a3bp	ENSMUST00000221394	processed_transcript		13	1	96634300	506
ENSMUSG00000115342	processed_pseudogene	Gm49095	ENSMUST00000226154	processed_pseudogene		15	1	5951444	916
ENSMUSG00000031209	protein_coding	Heph	ENSMUST00000113838	protein_coding	principal1	X	1	96456390	4611
ENSMUSG00000021240	protein_coding	Abcd4	ENSMUST00000223107	protein_coding		12	-1	84617413	2410
ENSMUSG00000098950	protein_coding	Gm28036	ENSMUST00000162612	nonsense_mediated_decay	alternative2	2	-1	156127092	706
ENSMUSG00000084383	processed_pseudogene	Gm13370	ENSMUST00000121309	processed_pseudogene		2	1	24985984	483
ENSMUSG00000059835	processed_pseudogene	Rpl13-ps3	ENSMUST00000079960	processed_pseudogene		14	1	58893506	624
ENSMUSG00000104210	TEC	Gm37984	ENSMUST00000191641	TEC		1	-1	180477087	3733
ENSMUSG00000087668	antisense	Gm11186	ENSMUST00000137096	antisense		11	-1	53120056	1179
ENSMUSG00000098950	protein_coding	Gm28036	ENSMUST00000160165	nonsense_mediated_decay	alternative2	2	-1	156127092	638
ENSMUSG00000109853	lincRNA	Gm33045	ENSMUST00000209229	lincRNA		13	1	110627288	384
ENSMUSG00000098950	protein_coding	Gm28036	ENSMUST00000159952	nonsense_mediated_decay	alternative2	2	-1	156127092	832
ENSMUSG00000114486	lincRNA	Gm48447	ENSMUST00000224187	lincRNA		14	1	58912104	582
ENSMUSG00000021669	protein_coding	Col4a3bp	ENSMUST00000179226	protein_coding	alternative1	13	1	96542618	3040
ENSMUSG00000107417	protein_coding	Olfr1383	ENSMUST00000204706	protein_coding	principal1	11	1	49519648	4168
ENSMUSG00000030058	protein_coding	Copg1	ENSMUST00000205234	retained_intron		6	1	87893943	742
ENSMUSG00000021240	protein_coding	Abcd4	ENSMUST00000021666	protein_coding	principal1	12	-1	84617370	2309
ENSMUSG00000008090	protein_coding	Fgfrl1	ENSMUST00000112560	protein_coding		5	1	108694268	2318
ENSMUSG00000030058	protein_coding	Copg1	ENSMUST00000152175	retained_intron		6	1	87895116	822
ENSMUSG00000107417	protein_coding	Olfr1383	ENSMUST00000077143	protein_coding	principal1	11	1	49523721	940
ENSMUSG00000015980	protein_coding	Lrrc27	ENSMUST00000106104	protein_coding	alternative2	7	1	139213272	1692
ENSMUSG00000113379	TEC	Gm46436	ENSMUST00000221851	TEC		13	1	96576630	1294
ENSMUSG00000109853	lincRNA	Gm33045	ENSMUST00000210049	lincRNA		13	1	110627973	975
ENSMUSG00000098950	protein_coding	Gm28036	ENSMUST00000184899	nonsense_mediated_decay	alternative2	2	-1	156111926	688
ENSMUSG00000114441	lincRNA	Gm33472	ENSMUST00000224588	lincRNA		14	-1	59061063	789
ENSMUSG00000021240	protein_coding	Abcd4	ENSMUST00000221948	retained_intron		12	-1	84604052	825
ENSMUSG00000114441	lincRNA	Gm33472	ENSMUST00000225493	lincRNA		14	-1	59045940	648
ENSMUSG00000098950	protein_coding	Gm28036	ENSMUST00000183972	nonsense_mediated_decay	alternative2	2	-1	156096928	375
ENSMUSG00000114441	lincRNA	Gm33472	ENSMUST00000224109	lincRNA		14	-1	59061024	2385
ENSMUSG00000109853	lincRNA	Gm33045	ENSMUST00000211420	lincRNA		13	1	110627996	949
ENSMUSG00000030058	protein_coding	Copg1	ENSMUST00000149409	retained_intron		6	1	87895456	1232
ENSMUSG00000015980	protein_coding	Lrrc27	ENSMUST00000135509	protein_coding		7	1	139214675	585
ENSMUSG00000114720	lincRNA	Gm41162	ENSMUST00000225652	lincRNA		14	1	59046121	524
ENSMUSG00000098950	protein_coding	Gm28036	ENSMUST00000183518	protein_coding	alternative2	2	-1	156111931	411
ENSMUSG00000115093	processed_pseudogene	Gm8047	ENSMUST00000227373	processed_pseudogene		15	1	6034961	860
ENSMUSG00000053963	protein_coding	Stum	ENSMUST00000136521	protein_coding	principal2	1	-1	180483467	6506
ENSMUSG00000027472	protein_coding	Pdrg1	ENSMUST00000028972	protein_coding	principal1	2	-1	153015427	1273
ENSMUSG00000031209	protein_coding	Heph	ENSMUST00000154413	retained_intron		X	1	96456428	1924
ENSMUSG00000114289	lincRNA	Gm48453	ENSMUST00000223800	lincRNA		14	-1	59087118	2309
ENSMUSG00000021240	protein_coding	Abcd4	ENSMUST00000220952	retained_intron		12	-1	84617357	2136
ENSMUSG00000015980	protein_coding	Lrrc27	ENSMUST00000126199	processed_transcript		7	1	139220611	351
ENSMUSG00000030058	protein_coding	Copg1	ENSMUST00000149907	retained_intron		6	1	87895997	5357
ENSMUSG00000114775	lincRNA	Gm33172	ENSMUST00000225669	lincRNA		13	1	110683912	1364
ENSMUSG00000021240	protein_coding	Abcd4	ENSMUST00000220678	retained_intron		12	-1	84611905	3698
ENSMUSG00000008090	protein_coding	Fgfrl1	ENSMUST00000013633	protein_coding	principal1	5	1	108694502	2329
ENSMUSG00000015980	protein_coding	Lrrc27	ENSMUST00000130248	retained_intron		7	1	139220898	912
ENSMUSG00000053963	protein_coding	Stum	ENSMUST00000211561	protein_coding	alternative1	1	-1	180483329	1063
ENSMUSG00000031209	protein_coding	Heph	ENSMUST00000135212	retained_intron		X	1	96456428	3321
ENSMUSG00000030058	protein_coding	Copg1	ENSMUST00000132938	retained_intron		6	1	87897803	815
ENSMUSG00000053963	protein_coding	Stum	ENSMUST00000210737	processed_transcript		1	-1	180462612	1110
ENSMUSG00000114587	processed_pseudogene	Gm48533	ENSMUST00000225026	processed_pseudogene		13	-1	110843121	217
ENSMUSG00000053963	protein_coding	Stum	ENSMUST00000210107	processed_transcript		1	-1	180462612	1097
ENSMUSG00000021240	protein_coding	Abcd4	ENSMUST00000220553	processed_transcript		12	-1	84617340	809
ENSMUSG00000030058	protein_coding	Copg1	ENSMUST00000127614	processed_transcript		6	1	87908772	332
ENSMUSG00000082035	processed_pseudogene	Rpl17-ps8	ENSMUST00000118924	processed_pseudogene		X	1	96484859	621
ENSMUSG00000114275	processed_pseudogene	Gm48534	ENSMUST00000223612	processed_pseudogene		13	-1	110844936	363
ENSMUSG00000053963	protein_coding	Stum	ENSMUST00000211782	processed_transcript		1	-1	180465881	531
ENSMUSG00000008090	protein_coding	Fgfrl1	ENSMUST00000199802	retained_intron		5	1	108705074	556
ENSMUSG00000021240	protein_coding	Abcd4	ENSMUST00000222889	nonsense_mediated_decay		12	-1	84615387	640
ENSMUSG00000029363	protein_coding	Rfc5	ENSMUST00000086461	protein_coding	principal1	5	-1	117389047	2796
ENSMUSG00000114320	processed_pseudogene	Gm30839	ENSMUST00000224712	processed_pseudogene		13	-1	110860671	259
ENSMUSG00000015980	protein_coding	Lrrc27	ENSMUST00000126213	processed_transcript		7	1	139233943	744
ENSMUSG00000109352	processed_pseudogene	Gm18256	ENSMUST00000209087	processed_pseudogene		7	1	44645428	907
ENSMUSG00000053963	protein_coding	Stum	ENSMUST00000179826	protein_coding	alternative1	1	-1	180483504	601
ENSMUSG00000015980	protein_coding	Lrrc27	ENSMUST00000142176	processed_transcript		7	1	139235893	619
ENSMUSG00000021240	protein_coding	Abcd4	ENSMUST00000221070	protein_coding		12	-1	84617227	470
ENSMUSG00000015980	protein_coding	Lrrc27	ENSMUST00000152992	processed_transcript		7	1	139238613	527
ENSMUSG00000114472	lincRNA	Gm38397	ENSMUST00000224654	lincRNA		13	1	110903499	2283
ENSMUSG00000070574	antisense	2310016G11Rik	ENSMUST00000209111	antisense		7	1	44668233	733
ENSMUSG00000116539	TEC	Gm49603	ENSMUST00000231464	TEC		16	-1	78480539	2798
ENSMUSG00000067847	protein_coding	Romo1	ENSMUST00000088610	protein_coding	principal1	2	1	156144039	569
ENSMUSG00000114307	lincRNA	4930526H09Rik	ENSMUST00000225424	lincRNA		13	-1	110903846	737
ENSMUSG00000116959	TEC	Gm49604	ENSMUST00000232118	TEC		16	1	78489680	3276
ENSMUSG00000027472	protein_coding	Pdrg1	ENSMUST00000150545	nonsense_mediated_decay		2	-1	153015427	1299
ENSMUSG00000110501	processed_pseudogene	Gm45900	ENSMUST00000211879	processed_pseudogene		8	-1	107444692	409
ENSMUSG00000070709	protein_coding	Zfp974	ENSMUST00000098639	protein_coding	principal1	7	-1	27929430	5158
ENSMUSG00000070574	antisense	2310016G11Rik	ENSMUST00000094460	antisense		7	1	44676854	992
ENSMUSG00000114747	processed_pseudogene	Gm48547	ENSMUST00000223653	processed_pseudogene		13	-1	111018821	1006
ENSMUSG00000027472	protein_coding	Pdrg1	ENSMUST00000151392	retained_intron		2	-1	153012490	458
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000030452	protein_coding	alternative2	4	1	116708509	1524
ENSMUSG00000062181	protein_coding	Ces3b	ENSMUST00000173838	retained_intron		8	1	105083753	816
ENSMUSG00000027472	protein_coding	Pdrg1	ENSMUST00000140853	nonsense_mediated_decay		2	-1	153015366	441
ENSMUSG00000114824	lincRNA	3110015C05Rik	ENSMUST00000225326	lincRNA		13	-1	111229431	940
ENSMUSG00000070709	protein_coding	Zfp974	ENSMUST00000129341	protein_coding		7	-1	27927511	603
ENSMUSG00000029363	protein_coding	Rfc5	ENSMUST00000150962	retained_intron		5	-1	117389022	3751
ENSMUSG00000070709	protein_coding	Zfp974	ENSMUST00000145674	retained_intron		7	-1	27927458	822
ENSMUSG00000027472	protein_coding	Pdrg1	ENSMUST00000152072	retained_intron		2	-1	153015346	432
ENSMUSG00000070709	protein_coding	Zfp974	ENSMUST00000138583	processed_transcript		7	-1	27929430	881
ENSMUSG00000029363	protein_coding	Rfc5	ENSMUST00000129369	retained_intron		5	-1	117380851	375
ENSMUSG00000055194	protein_coding	Actbl2	ENSMUST00000054716	protein_coding	principal1	13	1	111255013	2737
ENSMUSG00000029363	protein_coding	Rfc5	ENSMUST00000123392	retained_intron		5	-1	117380216	264
ENSMUSG00000027472	protein_coding	Pdrg1	ENSMUST00000123083	nonsense_mediated_decay		2	-1	153015362	323
ENSMUSG00000070709	protein_coding	Zfp974	ENSMUST00000137668	processed_transcript		7	-1	27929460	877
ENSMUSG00000039244	protein_coding	E130309D02Rik	ENSMUST00000159406	processed_transcript		5	-1	143315064	1758
ENSMUSG00000029363	protein_coding	Rfc5	ENSMUST00000126262	retained_intron		5	-1	117386831	1256
ENSMUSG00000070709	protein_coding	Zfp974	ENSMUST00000152330	retained_intron		7	-1	27928022	1026
ENSMUSG00000081277	processed_pseudogene	Gm15285	ENSMUST00000119271	processed_pseudogene		13	-1	111361675	473
ENSMUSG00000067847	protein_coding	Romo1	ENSMUST00000109597	protein_coding	principal1	2	1	156144233	550
ENSMUSG00000097455	antisense	Gm26891	ENSMUST00000181644	antisense		7	1	27927724	2599
ENSMUSG00000027472	protein_coding	Pdrg1	ENSMUST00000124220	retained_intron		2	-1	153015377	879
ENSMUSG00000082258	processed_pseudogene	Gm15289	ENSMUST00000117793	processed_pseudogene		13	1	111361676	244
ENSMUSG00000016559	protein_coding	H3f3b	ENSMUST00000106454	protein_coding	principal1	11	-1	116027962	2514
ENSMUSG00000029363	protein_coding	Rfc5	ENSMUST00000111953	protein_coding		5	-1	117389045	772
ENSMUSG00000067847	protein_coding	Romo1	ENSMUST00000109598	protein_coding	principal1	2	1	156144237	362
ENSMUSG00000027472	protein_coding	Pdrg1	ENSMUST00000140325	processed_transcript		2	-1	153015342	377
ENSMUSG00000086201	lincRNA	Gm6270	ENSMUST00000132731	lincRNA		13	-1	111368680	559
ENSMUSG00000016559	protein_coding	H3f3b	ENSMUST00000139623	processed_transcript		11	-1	116024514	874
ENSMUSG00000067847	protein_coding	Romo1	ENSMUST00000119950	protein_coding	principal1	2	1	156144240	379
ENSMUSG00000076892	TR_J_gene	Traj38	ENSMUST00000103704	TR_J_gene	principal1	14	1	54180574	62
ENSMUSG00000016559	protein_coding	H3f3b	ENSMUST00000139378	processed_transcript		11	-1	116024473	773
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000106462	protein_coding	alternative2	4	1	116708571	1112
ENSMUSG00000049336	protein_coding	Tenm2	ENSMUST00000102801	protein_coding	principal2	11	-1	37235882	9908
ENSMUSG00000063827	protein_coding	Olfr1382	ENSMUST00000213899	protein_coding	principal1	11	1	49528345	4285
ENSMUSG00000027502	protein_coding	Rtf2	ENSMUST00000029005	protein_coding	principal1	2	1	172440556	2173
ENSMUSG00000063827	protein_coding	Olfr1382	ENSMUST00000217564	protein_coding	principal1	11	1	49528285	4287
ENSMUSG00000049336	protein_coding	Tenm2	ENSMUST00000057207	protein_coding	alternative1	11	-1	36944166	8298
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000138305	protein_coding		4	1	116708596	367
ENSMUSG00000063827	protein_coding	Olfr1382	ENSMUST00000213707	protein_coding	principal1	11	1	49528247	4294
ENSMUSG00000076893	TR_J_gene	Traj37	ENSMUST00000103705	TR_J_gene	principal1	14	1	54181518	60
ENSMUSG00000063827	protein_coding	Olfr1382	ENSMUST00000213152	protein_coding	principal1	11	1	49528247	4236
ENSMUSG00000049336	protein_coding	Tenm2	ENSMUST00000157030	processed_transcript		11	-1	37235964	368
ENSMUSG00000049336	protein_coding	Tenm2	ENSMUST00000128501	processed_transcript		11	-1	36432276	340
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000112502	protein_coding	alternative2	2	1	61578585	2016
ENSMUSG00000090494	TR_J_pseudogene	Traj36	ENSMUST00000167829	TR_J_pseudogene		14	1	54182402	63
ENSMUSG00000063827	protein_coding	Olfr1382	ENSMUST00000074543	protein_coding	principal1	11	1	49535187	936
ENSMUSG00000039244	protein_coding	E130309D02Rik	ENSMUST00000046418	protein_coding	principal1	5	-1	143315360	2208
ENSMUSG00000037461	protein_coding	Ints7	ENSMUST00000045450	protein_coding	principal1	1	1	191575636	5347
ENSMUSG00000027502	protein_coding	Rtf2	ENSMUST00000109132	retained_intron		2	1	172440602	944
ENSMUSG00000039244	protein_coding	E130309D02Rik	ENSMUST00000160498	retained_intron		5	-1	143315131	4278
ENSMUSG00000087617	lincRNA	Gm14268	ENSMUST00000151070	lincRNA		2	-1	166398157	807
ENSMUSG00000027502	protein_coding	Rtf2	ENSMUST00000140048	processed_transcript		2	1	172452977	1922
ENSMUSG00000087617	lincRNA	Gm14268	ENSMUST00000132465	lincRNA		2	-1	166398187	682
ENSMUSG00000049336	protein_coding	Tenm2	ENSMUST00000155147	processed_transcript		11	-1	36495139	1464
ENSMUSG00000039244	protein_coding	E130309D02Rik	ENSMUST00000162332	processed_transcript		5	-1	143315340	944
ENSMUSG00000047123	protein_coding	Ticam1	ENSMUST00000058136	protein_coding	principal1	17	-1	56276786	2992
ENSMUSG00000061068	protein_coding	Mcpt4	ENSMUST00000043249	protein_coding	principal1	14	-1	56062313	1108
ENSMUSG00000049336	protein_coding	Tenm2	ENSMUST00000146113	processed_transcript		11	-1	36944166	2296
ENSMUSG00000105609	TEC	Gm42501	ENSMUST00000200220	TEC		5	1	143314839	1026
ENSMUSG00000016559	protein_coding	H3f3b	ENSMUST00000016703	protein_coding	principal1	11	-1	116024504	1993
ENSMUSG00000049336	protein_coding	Tenm2	ENSMUST00000149787	processed_transcript		11	-1	36677745	2520
ENSMUSG00000104678	processed_pseudogene	Gm4321	ENSMUST00000200520	processed_pseudogene		3	-1	117889014	442
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000125671	protein_coding		4	1	116708598	793
ENSMUSG00000049336	protein_coding	Tenm2	ENSMUST00000163524	protein_coding	principal2	11	-1	36944166	8668
ENSMUSG00000085129	lincRNA	5031425F14Rik	ENSMUST00000127920	lincRNA		2	1	166447451	2098
ENSMUSG00000111686	processed_pseudogene	Rab7-ps1	ENSMUST00000213253	processed_pseudogene		9	-1	54825282	622
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000228877	nonsense_mediated_decay		14	1	55490651	5087
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000130828	protein_coding		4	1	116708609	675
ENSMUSG00000104703	lincRNA	4921521D15Rik	ENSMUST00000197578	lincRNA		3	1	117969130	1927
ENSMUSG00000086375	antisense	Gm12127	ENSMUST00000123278	antisense		11	1	36278041	706
ENSMUSG00000087208	processed_pseudogene	Gm5125	ENSMUST00000148614	processed_pseudogene		X	-1	102107226	624
ENSMUSG00000085891	processed_transcript	Gm14634	ENSMUST00000139163	processed_transcript		X	1	12762278	1662
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000129624	processed_transcript		4	1	116708615	354
ENSMUSG00000085891	processed_transcript	Gm14634	ENSMUST00000151112	processed_transcript		X	1	12762544	1584
ENSMUSG00000036264	protein_coding	Fstl4	ENSMUST00000036796	protein_coding	principal1	11	1	52764634	4380
ENSMUSG00000074569	protein_coding	Gcnt7	ENSMUST00000099060	protein_coding	principal1	2	-1	172458596	2220
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000126197	retained_intron		4	1	116708624	1335
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000124544	protein_coding		8	1	45507794	3798
ENSMUSG00000074569	protein_coding	Gcnt7	ENSMUST00000161334	protein_coding		2	-1	172454742	1796
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000106463	protein_coding	principal2	4	1	116708634	1159
ENSMUSG00000058073	processed_pseudogene	Gm11189	ENSMUST00000117979	processed_pseudogene		11	1	53200684	375
ENSMUSG00000032754	protein_coding	Slc8b1	ENSMUST00000068326	protein_coding	principal1	5	1	120511168	2898
ENSMUSG00000085250	lincRNA	Gm15234	ENSMUST00000141485	lincRNA		3	1	94658961	1058
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000135499	protein_coding		4	1	116708704	533
ENSMUSG00000087633	antisense	Gm14455	ENSMUST00000138288	antisense		2	-1	172440560	2146
ENSMUSG00000081561	processed_pseudogene	Gm12425	ENSMUST00000119580	processed_pseudogene		4	1	47041598	363
ENSMUSG00000107759	sense_intronic	Gm44258	ENSMUST00000204925	sense_intronic		6	1	137431305	301
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000112495	protein_coding	alternative2	2	1	61593077	2039
ENSMUSG00000037568	protein_coding	Vash2	ENSMUST00000166139	protein_coding	principal1	1	-1	190979296	3897
ENSMUSG00000030223	protein_coding	Ptpro	ENSMUST00000203010	retained_intron		6	1	137252319	2160
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000155391	nonsense_mediated_decay		4	1	116708929	1237
ENSMUSG00000032754	protein_coding	Slc8b1	ENSMUST00000111890	protein_coding		5	1	120511235	2775
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000112494	protein_coding		2	1	61593136	2698
ENSMUSG00000104181	processed_pseudogene	Gm8850	ENSMUST00000195316	processed_pseudogene		1	1	155179801	588
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000124628	processed_transcript		4	1	116712425	540
ENSMUSG00000037568	protein_coding	Vash2	ENSMUST00000047409	protein_coding	principal1	1	-1	190979002	4032
ENSMUSG00000093386	processed_transcript	1700120O09Rik	ENSMUST00000177127	processed_transcript		14	-1	67335928	977
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000134192	processed_transcript		4	1	116712723	758
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000226757	nonsense_mediated_decay		14	1	55491091	4647
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000156206	protein_coding		4	1	116712790	431
ENSMUSG00000037568	protein_coding	Vash2	ENSMUST00000192306	processed_transcript		1	-1	190979214	605
ENSMUSG00000032754	protein_coding	Slc8b1	ENSMUST00000076051	protein_coding		5	1	120511252	2661
ENSMUSG00000028689	protein_coding	Ccdc163	ENSMUST00000106464	protein_coding	principal2	4	1	116708930	1213
ENSMUSG00000104487	lincRNA	Gm31373	ENSMUST00000194403	lincRNA		1	1	190992692	737
ENSMUSG00000007379	protein_coding	Dennd2c	ENSMUST00000173206	protein_coding	alternative2	3	1	103102604	4879
ENSMUSG00000103723	processed_pseudogene	Gm37095	ENSMUST00000195421	processed_pseudogene		1	-1	191000798	205
ENSMUSG00000032754	protein_coding	Slc8b1	ENSMUST00000147496	protein_coding		5	1	120511270	239
ENSMUSG00000103964	processed_pseudogene	Gm8407	ENSMUST00000192719	processed_pseudogene		1	-1	191001851	427
ENSMUSG00000032754	protein_coding	Slc8b1	ENSMUST00000140329	protein_coding		5	1	120512868	378
ENSMUSG00000032754	protein_coding	Slc8b1	ENSMUST00000111889	protein_coding		5	1	120513143	1624
ENSMUSG00000023967	protein_coding	Mrps18a	ENSMUST00000024763	protein_coding	principal1	17	1	46110986	884
ENSMUSG00000032754	protein_coding	Slc8b1	ENSMUST00000123326	retained_intron		5	1	120520779	743
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000141544	processed_transcript		2	1	61593165	2061
ENSMUSG00000114367	processed_pseudogene	Gm48216	ENSMUST00000224130	processed_pseudogene		13	-1	106531817	820
ENSMUSG00000024197	protein_coding	Plin3	ENSMUST00000019726	protein_coding	principal1	17	-1	56290511	3645
ENSMUSG00000023967	protein_coding	Mrps18a	ENSMUST00000131943	retained_intron		17	1	46110995	571
ENSMUSG00000023967	protein_coding	Mrps18a	ENSMUST00000123646	protein_coding		17	1	46110996	621
ENSMUSG00000059877	processed_pseudogene	Dph3b-ps	ENSMUST00000076359	processed_pseudogene		13	-1	106547060	246
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000139533	processed_transcript		2	1	61593164	1535
ENSMUSG00000024197	protein_coding	Plin3	ENSMUST00000233070	protein_coding		17	-1	56292873	562
ENSMUSG00000023967	protein_coding	Mrps18a	ENSMUST00000134237	processed_transcript		17	1	46122803	903
ENSMUSG00000114422	lincRNA	Gm30411	ENSMUST00000225713	lincRNA		13	-1	106761579	1011
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000136688	processed_transcript		2	1	61578611	2563
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000143515	processed_transcript		2	1	61627721	346
ENSMUSG00000023967	protein_coding	Mrps18a	ENSMUST00000147672	retained_intron		17	1	46125275	2220
ENSMUSG00000021371	protein_coding	Mcur1	ENSMUST00000021800	protein_coding	principal1	13	-1	43560161	4339
ENSMUSG00000037461	protein_coding	Ints7	ENSMUST00000193961	retained_intron		1	1	191575727	3177
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000145632	processed_transcript		2	1	61578611	569
ENSMUSG00000023967	protein_coding	Mrps18a	ENSMUST00000146255	retained_intron		17	1	46125458	544
ENSMUSG00000078771	protein_coding	Evi2a	ENSMUST00000103236	protein_coding	principal1	11	-1	79530588	1463
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000154693	processed_transcript		2	1	61643831	832
ENSMUSG00000078771	protein_coding	Evi2a	ENSMUST00000154415	protein_coding		11	-1	79527775	544
ENSMUSG00000078771	protein_coding	Evi2a	ENSMUST00000146611	protein_coding		11	-1	79528146	343
ENSMUSG00000073380	protein_coding	Arrdc5	ENSMUST00000097303	protein_coding	principal1	17	-1	56300286	1056
ENSMUSG00000023966	protein_coding	Rsph9	ENSMUST00000148581	protein_coding		17	-1	46136830	403
ENSMUSG00000049649	protein_coding	Gpr3	ENSMUST00000105911	protein_coding	principal1	4	-1	133211857	2518
ENSMUSG00000073380	protein_coding	Arrdc5	ENSMUST00000233911	protein_coding		17	-1	56300266	721
ENSMUSG00000066191	protein_coding	Anks6	ENSMUST00000107747	nonsense_mediated_decay		4	-1	47057306	3980
ENSMUSG00000078771	protein_coding	Evi2a	ENSMUST00000133148	processed_transcript		11	-1	79530609	789
ENSMUSG00000078771	protein_coding	Evi2a	ENSMUST00000170799	protein_coding	principal1	11	-1	79530609	2289
ENSMUSG00000049649	protein_coding	Gpr3	ENSMUST00000052090	protein_coding	principal1	4	-1	133212536	1116
ENSMUSG00000021371	protein_coding	Mcur1	ENSMUST00000223347	retained_intron		13	-1	43546120	579
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000112501	protein_coding	alternative2	2	1	61593097	2227
ENSMUSG00000021371	protein_coding	Mcur1	ENSMUST00000223353	retained_intron		13	-1	43560191	3191
ENSMUSG00000064289	protein_coding	Tank	ENSMUST00000078074	protein_coding	principal3	2	1	61578586	2018
ENSMUSG00000066191	protein_coding	Anks6	ENSMUST00000229609	protein_coding	alternative2	4	-1	47057427	3438
ENSMUSG00000049649	protein_coding	Gpr3	ENSMUST00000151025	protein_coding		4	-1	133212313	393
ENSMUSG00000066191	protein_coding	Anks6	ENSMUST00000152479	processed_transcript		4	-1	47025710	762
ENSMUSG00000066191	protein_coding	Anks6	ENSMUST00000154664	processed_transcript		4	-1	47040143	1013
ENSMUSG00000037461	protein_coding	Ints7	ENSMUST00000194877	nonsense_mediated_decay		1	1	191575742	3069
ENSMUSG00000066191	protein_coding	Anks6	ENSMUST00000084616	protein_coding	principal2	4	-1	47057306	3552
ENSMUSG00000028865	protein_coding	Cd164l2	ENSMUST00000150744	processed_transcript		4	1	133212131	406
ENSMUSG00000023966	protein_coding	Rsph9	ENSMUST00000024762	protein_coding	principal1	17	-1	46144216	966
ENSMUSG00000049612	protein_coding	Omg	ENSMUST00000164465	protein_coding	principal1	11	-1	79504084	2228
ENSMUSG00000096573	lincRNA	1700009J07Rik	ENSMUST00000185309	lincRNA		10	1	77893417	920
ENSMUSG00000104033	TEC	Gm37773	ENSMUST00000194141	TEC		3	1	118526151	2120
ENSMUSG00000037461	protein_coding	Ints7	ENSMUST00000193569	nonsense_mediated_decay		1	1	191575762	1510
ENSMUSG00000039656	protein_coding	Rxrb	ENSMUST00000044858	protein_coding	principal4	17	1	34031812	2627
ENSMUSG00000096573	lincRNA	1700009J07Rik	ENSMUST00000185513	lincRNA		10	1	77893428	1084
ENSMUSG00000082304	processed_pseudogene	Gm11198	ENSMUST00000119771	processed_pseudogene		11	-1	79372230	974
ENSMUSG00000023966	protein_coding	Rsph9	ENSMUST00000152354	retained_intron		17	-1	46136795	670
ENSMUSG00000037461	protein_coding	Ints7	ENSMUST00000194785	nonsense_mediated_decay		1	1	191575762	4002
ENSMUSG00000007379	protein_coding	Dennd2c	ENSMUST00000166143	retained_intron		3	1	103102660	3060
ENSMUSG00000039656	protein_coding	Rxrb	ENSMUST00000173554	retained_intron		17	1	34031816	939
ENSMUSG00000096573	lincRNA	1700009J07Rik	ENSMUST00000178996	lincRNA		10	1	77893420	912
ENSMUSG00000037461	protein_coding	Ints7	ENSMUST00000192681	retained_intron		1	1	191575776	849
ENSMUSG00000076894	TR_J_gene	Traj35	ENSMUST00000103706	TR_J_gene	principal1	14	1	54183774	65
ENSMUSG00000097311	processed_transcript	Gm26871	ENSMUST00000180774	lincRNA		3	1	118430324	695
ENSMUSG00000039656	protein_coding	Rxrb	ENSMUST00000174299	protein_coding	alternative2	17	1	34031852	2577
ENSMUSG00000028865	protein_coding	Cd164l2	ENSMUST00000218338	processed_transcript		4	1	133212375	701
ENSMUSG00000097311	processed_transcript	Gm26871	ENSMUST00000180593	lincRNA		3	1	118433797	700
ENSMUSG00000083310	processed_pseudogene	Gm5760	ENSMUST00000119692	processed_pseudogene		X	-1	99082402	1002
ENSMUSG00000028865	protein_coding	Cd164l2	ENSMUST00000218998	processed_transcript		4	1	133212906	241
ENSMUSG00000093938	protein_coding	Evi2b	ENSMUST00000179322	protein_coding	principal1	11	-1	79523762	1858
ENSMUSG00000021958	protein_coding	Pinx1	ENSMUST00000022528	protein_coding	principal1	14	1	63860364	1295
ENSMUSG00000076895	TR_J_gene	Traj34	ENSMUST00000103707	TR_J_gene	principal1	14	1	54184699	58
ENSMUSG00000082529	processed_pseudogene	Gm11199	ENSMUST00000118691	processed_pseudogene		11	-1	79452447	507
ENSMUSG00000021958	protein_coding	Pinx1	ENSMUST00000225644	processed_transcript		14	1	63899769	488
ENSMUSG00000074570	protein_coding	Cass4	ENSMUST00000099061	protein_coding		2	1	172393794	3731
ENSMUSG00000007379	protein_coding	Dennd2c	ENSMUST00000172288	protein_coding	principal2	3	1	103127556	4979
ENSMUSG00000021958	protein_coding	Pinx1	ENSMUST00000225564	retained_intron		14	1	63918650	1210
ENSMUSG00000096351	protein_coding	Samd11	ENSMUST00000179919	protein_coding	principal2	4	-1	156255338	2610
ENSMUSG00000091523	antisense	AU040972	ENSMUST00000165610	antisense		11	-1	79484031	1042
ENSMUSG00000097311	processed_transcript	Gm26871	ENSMUST00000181926	lincRNA		3	1	118433922	742
ENSMUSG00000097311	processed_transcript	Gm26871	ENSMUST00000181060	lincRNA		3	1	118433933	355
ENSMUSG00000020716	protein_coding	Nf1	ENSMUST00000145839	processed_transcript		11	1	79339693	721
ENSMUSG00000097311	processed_transcript	Gm26871	ENSMUST00000181310	lincRNA		3	1	118433966	523
ENSMUSG00000097311	processed_transcript	Gm26871	ENSMUST00000200179	retained_intron		3	1	118457659	3052
ENSMUSG00000095385	lincRNA	D630033O11Rik	ENSMUST00000210802	lincRNA		9	1	43243599	2761
ENSMUSG00000063060	protein_coding	Sox7	ENSMUST00000079652	protein_coding	principal1	14	1	63943673	3299
ENSMUSG00000104178	lincRNA	Gm9916	ENSMUST00000192943	lincRNA		3	1	118434770	1228
ENSMUSG00000096351	protein_coding	Samd11	ENSMUST00000219866	retained_intron		4	-1	156252080	2256
ENSMUSG00000074570	protein_coding	Cass4	ENSMUST00000103073	protein_coding	alternative2	2	1	172393821	3600
ENSMUSG00000024730	protein_coding	Ms4a8a	ENSMUST00000025636	protein_coding	principal1	19	-1	11081102	1081
ENSMUSG00000095385	lincRNA	D630033O11Rik	ENSMUST00000179013	lincRNA		9	1	43259880	564
ENSMUSG00000031400	protein_coding	G6pdx	ENSMUST00000004327	protein_coding	principal1	X	-1	74429194	2652
ENSMUSG00000095385	lincRNA	D630033O11Rik	ENSMUST00000210588	lincRNA		9	1	43264133	1358
ENSMUSG00000007379	protein_coding	Dennd2c	ENSMUST00000174060	processed_transcript		3	1	103140326	2626
ENSMUSG00000096351	protein_coding	Samd11	ENSMUST00000217934	protein_coding	alternative2	4	-1	156254758	2413
ENSMUSG00000095385	lincRNA	D630033O11Rik	ENSMUST00000210869	lincRNA		9	1	43264201	554
ENSMUSG00000096351	protein_coding	Samd11	ENSMUST00000218788	protein_coding	alternative2	4	-1	156255307	2217
ENSMUSG00000031217	protein_coding	Efnb1	ENSMUST00000052839	protein_coding	principal1	X	1	99136130	3258
ENSMUSG00000024730	protein_coding	Ms4a8a	ENSMUST00000187859	retained_intron		19	-1	11081102	1176
ENSMUSG00000007379	protein_coding	Dennd2c	ENSMUST00000173037	retained_intron		3	1	103140968	3578
ENSMUSG00000031400	protein_coding	G6pdx	ENSMUST00000143521	protein_coding		X	-1	74428876	1250
ENSMUSG00000101439	processed_pseudogene	Gm336	ENSMUST00000186376	processed_pseudogene		19	-1	11092077	1480
ENSMUSG00000095385	lincRNA	D630033O11Rik	ENSMUST00000213429	lincRNA		9	1	43265279	431
ENSMUSG00000039656	protein_coding	Rxrb	ENSMUST00000173354	protein_coding	alternative2	17	1	34032196	2502
ENSMUSG00000007379	protein_coding	Dennd2c	ENSMUST00000174486	retained_intron		3	1	103149164	1482
ENSMUSG00000095385	lincRNA	D630033O11Rik	ENSMUST00000209461	lincRNA		9	1	43270822	377
ENSMUSG00000096351	protein_coding	Samd11	ENSMUST00000218230	retained_intron		4	-1	156255309	2522
ENSMUSG00000031400	protein_coding	G6pdx	ENSMUST00000135894	processed_transcript		X	-1	74428849	580
ENSMUSG00000095385	lincRNA	D630033O11Rik	ENSMUST00000210037	lincRNA		9	1	43274273	296
ENSMUSG00000074570	protein_coding	Cass4	ENSMUST00000109136	protein_coding	principal3	2	1	172393900	2702
ENSMUSG00000031217	protein_coding	Efnb1	ENSMUST00000151750	processed_transcript		X	1	99138131	807
ENSMUSG00000096351	protein_coding	Samd11	ENSMUST00000220228	protein_coding		4	-1	156255216	808
ENSMUSG00000031400	protein_coding	G6pdx	ENSMUST00000155963	retained_intron		X	-1	74428880	551
ENSMUSG00000028865	protein_coding	Cd164l2	ENSMUST00000105910	protein_coding	principal1	4	1	133220810	986
ENSMUSG00000039656	protein_coding	Rxrb	ENSMUST00000116612	protein_coding	alternative2	17	1	34032401	2283
ENSMUSG00000096351	protein_coding	Samd11	ENSMUST00000219393	protein_coding		4	-1	156255657	525
ENSMUSG00000005354	protein_coding	Txn2	ENSMUST00000173561	processed_transcript		15	-1	77915700	266
ENSMUSG00000074570	protein_coding	Cass4	ENSMUST00000228775	protein_coding	alternative2	2	1	172393901	2629
ENSMUSG00000039656	protein_coding	Rxrb	ENSMUST00000174740	retained_intron		17	1	34033552	697
ENSMUSG00000042870	protein_coding	Tom1	ENSMUST00000165630	protein_coding	principal1	8	1	75033705	2267
ENSMUSG00000096351	protein_coding	Samd11	ENSMUST00000220030	retained_intron		4	-1	156252395	666
ENSMUSG00000111380	processed_pseudogene	D9Wsu149	ENSMUST00000214169	processed_pseudogene		9	1	57482976	594
ENSMUSG00000028865	protein_coding	Cd164l2	ENSMUST00000126929	processed_transcript		4	1	133221448	566
ENSMUSG00000039656	protein_coding	Rxrb	ENSMUST00000174130	retained_intron		17	1	34033908	516
ENSMUSG00000028865	protein_coding	Cd164l2	ENSMUST00000134713	retained_intron		4	1	133221534	828
ENSMUSG00000096351	protein_coding	Samd11	ENSMUST00000219310	retained_intron		4	-1	156254547	610
ENSMUSG00000039656	protein_coding	Rxrb	ENSMUST00000174645	retained_intron		17	1	34036323	635
ENSMUSG00000039656	protein_coding	Rxrb	ENSMUST00000174033	retained_intron		17	1	34036367	826
ENSMUSG00000042870	protein_coding	Tom1	ENSMUST00000212651	protein_coding		8	1	75033707	503
ENSMUSG00000074280	processed_pseudogene	Gm6166	ENSMUST00000098689	processed_pseudogene		9	1	57483963	409
ENSMUSG00000066595	protein_coding	Flvcr1	ENSMUST00000194917	retained_intron		1	-1	191011911	3029
ENSMUSG00000059498	protein_coding	Fcgr3	ENSMUST00000168817	retained_intron		1	-1	171058054	1298
ENSMUSG00000039656	protein_coding	Rxrb	ENSMUST00000174578	retained_intron		17	1	34036463	759
ENSMUSG00000113831	lincRNA	Gm49602	ENSMUST00000220671	lincRNA		12	-1	118234564	2970
ENSMUSG00000111414	processed_pseudogene	Gm18103	ENSMUST00000216621	processed_pseudogene		9	1	57483810	779
ENSMUSG00000042870	protein_coding	Tom1	ENSMUST00000212564	nonsense_mediated_decay		8	1	75033724	453
ENSMUSG00000042870	protein_coding	Tom1	ENSMUST00000212388	protein_coding		8	1	75033724	421
ENSMUSG00000042870	protein_coding	Tom1	ENSMUST00000212299	protein_coding		8	1	75033731	469
ENSMUSG00000033985	protein_coding	Tesk2	ENSMUST00000045542	protein_coding	principal1	4	1	116720948	3033
ENSMUSG00000062309	protein_coding	Rpp25	ENSMUST00000080514	protein_coding	principal1	9	1	57504026	1423
ENSMUSG00000031725	protein_coding	Ces1f	ENSMUST00000034178	protein_coding	principal1	8	-1	93279747	1926
ENSMUSG00000062181	protein_coding	Ces3b	ENSMUST00000093221	protein_coding	principal1	8	1	105083755	2403
ENSMUSG00000028392	protein_coding	Bspry	ENSMUST00000030088	protein_coding	principal2	4	1	62480053	1757
ENSMUSG00000033985	protein_coding	Tesk2	ENSMUST00000106459	protein_coding		4	1	116720969	2444
ENSMUSG00000042870	protein_coding	Tom1	ENSMUST00000078847	protein_coding		8	1	75033737	1769
ENSMUSG00000033985	protein_coding	Tesk2	ENSMUST00000106456	protein_coding		4	1	116741683	2430
ENSMUSG00000031725	protein_coding	Ces1f	ENSMUST00000156737	retained_intron		8	-1	93258739	569
ENSMUSG00000023147	protein_coding	Get1	ENSMUST00000233805	processed_transcript		16	1	96145407	1281
ENSMUSG00000031725	protein_coding	Ces1f	ENSMUST00000151261	retained_intron		8	-1	93267278	562
ENSMUSG00000033985	protein_coding	Tesk2	ENSMUST00000142529	processed_transcript		4	1	116771763	530
ENSMUSG00000028392	protein_coding	Bspry	ENSMUST00000107449	protein_coding	alternative2	4	1	62480053	2167
ENSMUSG00000085199	antisense	Gm15346	ENSMUST00000143638	antisense		8	1	22686265	475
ENSMUSG00000042870	protein_coding	Tom1	ENSMUST00000211869	protein_coding		8	1	75033753	392
ENSMUSG00000031725	protein_coding	Ces1f	ENSMUST00000124066	retained_intron		8	-1	93267405	578
ENSMUSG00000062181	protein_coding	Ces3b	ENSMUST00000074403	protein_coding		8	1	105083763	1907
ENSMUSG00000031725	protein_coding	Ces1f	ENSMUST00000133879	retained_intron		8	-1	93275346	439
ENSMUSG00000028392	protein_coding	Bspry	ENSMUST00000132237	nonsense_mediated_decay		4	1	62480089	640
ENSMUSG00000023147	protein_coding	Get1	ENSMUST00000233227	retained_intron		16	1	96145407	1101
ENSMUSG00000042870	protein_coding	Tom1	ENSMUST00000211938	processed_transcript		8	1	75054352	377
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000076236	protein_coding	principal1	14	1	55491093	4602
ENSMUSG00000031725	protein_coding	Ces1f	ENSMUST00000140026	nonsense_mediated_decay		8	-1	93279727	383
ENSMUSG00000005354	protein_coding	Txn2	ENSMUST00000173631	protein_coding		15	-1	77927845	621
ENSMUSG00000032842	protein_coding	Abcc10	ENSMUST00000167360	protein_coding	alternative2	17	-1	46328023	4866
ENSMUSG00000062181	protein_coding	Ces3b	ENSMUST00000173088	nonsense_mediated_decay		8	1	105088619	570
ENSMUSG00000042870	protein_coding	Tom1	ENSMUST00000212278	processed_transcript		8	1	75060314	670
ENSMUSG00000030768	protein_coding	Disp1	ENSMUST00000171366	protein_coding	principal1	1	-1	183147461	4687
ENSMUSG00000095567	protein_coding	Noc2l	ENSMUST00000179886	retained_intron		4	1	156235919	2945
ENSMUSG00000000088	protein_coding	Cox5a	ENSMUST00000213678	retained_intron		9	1	57521274	1818
ENSMUSG00000066595	protein_coding	Flvcr1	ENSMUST00000085635	protein_coding	principal1	1	-1	191026158	4040
ENSMUSG00000032842	protein_coding	Abcc10	ENSMUST00000171584	nonsense_mediated_decay		17	-1	46327976	3731
ENSMUSG00000100833	antisense	Gm28988	ENSMUST00000191363	antisense		13	1	106851900	1897
ENSMUSG00000060475	protein_coding	Wtap	ENSMUST00000159551	protein_coding	principal1	17	-1	12992497	2060
ENSMUSG00000032842	protein_coding	Abcc10	ENSMUST00000047970	protein_coding	alternative2	17	-1	46327979	4885
ENSMUSG00000037325	protein_coding	Bbs7	ENSMUST00000040148	protein_coding	alternative1	3	-1	36613389	2599
ENSMUSG00000066595	protein_coding	Flvcr1	ENSMUST00000192666	nonsense_mediated_decay		1	-1	191025967	3666
ENSMUSG00000000088	protein_coding	Cox5a	ENSMUST00000000090	protein_coding	principal1	9	1	57521279	645
ENSMUSG00000066595	protein_coding	Flvcr1	ENSMUST00000194589	retained_intron		1	-1	191008455	2449
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000227563	retained_intron		14	1	55491166	4858
ENSMUSG00000060475	protein_coding	Wtap	ENSMUST00000007007	protein_coding	principal1	17	-1	12992259	2051
ENSMUSG00000066595	protein_coding	Flvcr1	ENSMUST00000193399	retained_intron		1	-1	191015395	490
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000227312	retained_intron		14	1	55491173	4762
ENSMUSG00000000088	protein_coding	Cox5a	ENSMUST00000214154	retained_intron		9	1	57521333	605
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000228497	retained_intron		14	1	55492866	552
ENSMUSG00000032842	protein_coding	Abcc10	ENSMUST00000095261	protein_coding	principal3	17	-1	46325766	5266
ENSMUSG00000005354	protein_coding	Txn2	ENSMUST00000005487	protein_coding	principal1	15	-1	77929006	1298
ENSMUSG00000066595	protein_coding	Flvcr1	ENSMUST00000191946	protein_coding		1	-1	191026124	1216
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000227070	processed_transcript		14	1	55493427	672
ENSMUSG00000097445	bidirectional_promoter_lncRNA	Gm26631	ENSMUST00000181462	bidirectional_promoter_lncRNA		9	-1	57537629	2505
ENSMUSG00000022053	protein_coding	Ebf2	ENSMUST00000022637	protein_coding	principal1	14	1	67233292	4352
ENSMUSG00000032842	protein_coding	Abcc10	ENSMUST00000168490	protein_coding		17	-1	46323632	791
ENSMUSG00000024598	protein_coding	Fbn2	ENSMUST00000025497	protein_coding	principal1	18	-1	58210487	11041
ENSMUSG00000023147	protein_coding	Get1	ENSMUST00000023913	protein_coding	principal1	16	1	96145407	2495
ENSMUSG00000097845	antisense	A230020J21Rik	ENSMUST00000192407	antisense		1	1	191025351	1649
ENSMUSG00000005354	protein_coding	Txn2	ENSMUST00000109748	protein_coding	principal1	15	-1	77928968	2049
ENSMUSG00000097845	antisense	A230020J21Rik	ENSMUST00000181050	antisense		1	1	191025350	837
ENSMUSG00000030768	protein_coding	Disp1	ENSMUST00000003035	protein_coding	principal1	1	-1	183221485	4984
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000226446	nonsense_mediated_decay		14	1	55494364	662
ENSMUSG00000032842	protein_coding	Abcc10	ENSMUST00000165733	retained_intron		17	-1	46327997	2283
ENSMUSG00000060475	protein_coding	Wtap	ENSMUST00000159986	protein_coding		17	-1	12992192	3187
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000226388	retained_intron		14	1	55497011	3833
ENSMUSG00000024598	protein_coding	Fbn2	ENSMUST00000236932	retained_intron		18	-1	58026880	600
ENSMUSG00000023147	protein_coding	Get1	ENSMUST00000232832	protein_coding		16	1	96145411	2678
ENSMUSG00000030768	protein_coding	Disp1	ENSMUST00000195372	protein_coding	principal1	1	-1	183221490	4901
ENSMUSG00000005354	protein_coding	Txn2	ENSMUST00000174529	protein_coding		15	-1	77927735	481
ENSMUSG00000023147	protein_coding	Get1	ENSMUST00000233566	protein_coding		16	1	96145413	2415
ENSMUSG00000022053	protein_coding	Ebf2	ENSMUST00000176161	protein_coding	principal1	14	1	67233586	5204
ENSMUSG00000032842	protein_coding	Abcc10	ENSMUST00000170168	processed_transcript		17	-1	46328352	583
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000228760	retained_intron		14	1	55497632	3332
ENSMUSG00000024598	protein_coding	Fbn2	ENSMUST00000235281	retained_intron		18	-1	58035978	681
ENSMUSG00000005354	protein_coding	Txn2	ENSMUST00000109747	protein_coding		15	-1	77928974	1778
ENSMUSG00000023147	protein_coding	Get1	ENSMUST00000233273	protein_coding		16	1	96145418	406
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000227088	retained_intron		14	1	55502657	597
ENSMUSG00000024598	protein_coding	Fbn2	ENSMUST00000235417	retained_intron		18	-1	58090977	489
ENSMUSG00000022053	protein_coding	Ebf2	ENSMUST00000177231	retained_intron		14	1	67233603	2037
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000023684	protein_coding	principal1	16	-1	91646952	3518
ENSMUSG00000005354	protein_coding	Txn2	ENSMUST00000100486	protein_coding		15	-1	77928997	676
ENSMUSG00000022211	protein_coding	Carmil3	ENSMUST00000226653	retained_intron		14	1	55504479	697
ENSMUSG00000060475	protein_coding	Wtap	ENSMUST00000160781	protein_coding		17	-1	12992546	2442
ENSMUSG00000023147	protein_coding	Get1	ENSMUST00000232884	processed_transcript		16	1	96151810	444
ENSMUSG00000030768	protein_coding	Disp1	ENSMUST00000192915	retained_intron		1	-1	183147531	1203
ENSMUSG00000022053	protein_coding	Ebf2	ENSMUST00000176029	protein_coding	principal1	14	1	67234644	2784
ENSMUSG00000117129	antisense	Gm49928	ENSMUST00000233788	antisense		16	-1	96147584	699
ENSMUSG00000117111	processed_pseudogene	Tpt1-ps7	ENSMUST00000232903	processed_pseudogene		17	-1	53467315	479
ENSMUSG00000060475	protein_coding	Wtap	ENSMUST00000159104	protein_coding		17	-1	12983473	495
ENSMUSG00000060475	protein_coding	Wtap	ENSMUST00000233867	protein_coding		17	-1	12994169	446
ENSMUSG00000071847	protein_coding	Apcdd1	ENSMUST00000236135	protein_coding	principal1	18	1	62922231	10879
ENSMUSG00000095567	protein_coding	Noc2l	ENSMUST00000179543	protein_coding	principal1	4	1	156236010	2785
ENSMUSG00000060475	protein_coding	Wtap	ENSMUST00000162395	protein_coding		17	-1	12986241	536
ENSMUSG00000030768	protein_coding	Disp1	ENSMUST00000194033	protein_coding		1	-1	183221522	707
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000156713	nonsense_mediated_decay		16	-1	91643146	3246
ENSMUSG00000093634	antisense	Gm10860	ENSMUST00000176934	antisense		14	-1	67437171	1888
ENSMUSG00000024598	protein_coding	Fbn2	ENSMUST00000237293	processed_transcript		18	-1	58209926	2553
ENSMUSG00000102478	transcribed_processed_pseudogene	BC085271	ENSMUST00000191852	processed_transcript		1	-1	183206557	1487
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000232640	protein_coding		16	-1	91621927	453
ENSMUSG00000060475	protein_coding	Wtap	ENSMUST00000161901	protein_coding		17	-1	12983972	574
ENSMUSG00000102478	transcribed_processed_pseudogene	BC085271	ENSMUST00000195236	transcribed_processed_pseudogene		1	-1	183206416	867
ENSMUSG00000024598	protein_coding	Fbn2	ENSMUST00000235779	processed_transcript		18	-1	58200705	566
ENSMUSG00000021961	protein_coding	4930578I06Rik	ENSMUST00000224600	nonsense_mediated_decay		14	-1	63987790	1170
ENSMUSG00000095567	protein_coding	Noc2l	ENSMUST00000238476	retained_intron		4	1	156237219	722
ENSMUSG00000060475	protein_coding	Wtap	ENSMUST00000233467	processed_transcript		17	-1	12994165	593
ENSMUSG00000095567	protein_coding	Noc2l	ENSMUST00000238320	retained_intron		4	1	156241226	667
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000144947	protein_coding		X	1	74393290	622
ENSMUSG00000095567	protein_coding	Noc2l	ENSMUST00000238213	retained_intron		4	1	156241721	1240
ENSMUSG00000071847	protein_coding	Apcdd1	ENSMUST00000096554	protein_coding	principal1	18	1	62922329	1842
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000232643	protein_coding		16	-1	91623017	582
ENSMUSG00000071847	protein_coding	Apcdd1	ENSMUST00000237428	nonsense_mediated_decay		18	1	62922506	845
ENSMUSG00000111895	antisense	Gm47252	ENSMUST00000217800	antisense		4	1	156254501	611
ENSMUSG00000021961	protein_coding	4930578I06Rik	ENSMUST00000022532	protein_coding	principal1	14	-1	63987780	1033
ENSMUSG00000068776	lincRNA	4930469B13Rik	ENSMUST00000224808	lincRNA		14	1	19615130	348
ENSMUSG00000093472	antisense	4930438E09Rik	ENSMUST00000176841	antisense		14	-1	67397742	776
ENSMUSG00000111403	antisense	Gm47544	ENSMUST00000215484	antisense		9	-1	46271365	524
ENSMUSG00000068776	lincRNA	4930469B13Rik	ENSMUST00000167151	lincRNA		14	1	19616100	162
ENSMUSG00000032305	protein_coding	Fam219b	ENSMUST00000093833	protein_coding		9	1	57537528	3001
ENSMUSG00000071847	protein_coding	Apcdd1	ENSMUST00000236605	retained_intron		18	1	62933510	2189
ENSMUSG00000026470	protein_coding	Stx6	ENSMUST00000027743	protein_coding	principal1	1	1	155158715	4589
ENSMUSG00000021961	protein_coding	4930578I06Rik	ENSMUST00000225544	processed_transcript		14	-1	63987503	808
ENSMUSG00000114214	lincRNA	Gm41102	ENSMUST00000224339	lincRNA		14	-1	19618889	1649
ENSMUSG00000071847	protein_coding	Apcdd1	ENSMUST00000163716	protein_coding	principal1	18	1	62922329	1888
ENSMUSG00000047428	protein_coding	Dlk2	ENSMUST00000188223	protein_coding		17	1	46297421	405
ENSMUSG00000117008	unitary_pseudogene	Gm49817	ENSMUST00000233655	unitary_pseudogene		10	-1	96096005	2008
ENSMUSG00000037325	protein_coding	Bbs7	ENSMUST00000108156	protein_coding	principal2	3	-1	36613477	2687
ENSMUSG00000075549	antisense	Gm6878	ENSMUST00000100448	antisense		14	-1	67314711	2018
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000232289	protein_coding	principal1	16	-1	91646931	3276
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000009396	protein_coding	alternative2	7	1	143005046	1582
ENSMUSG00000112316	processed_pseudogene	Gm48425	ENSMUST00000218910	processed_pseudogene		10	-1	96129742	1758
ENSMUSG00000114692	processed_pseudogene	Gm48157	ENSMUST00000225510	processed_pseudogene		14	-1	19647054	347
ENSMUSG00000026470	protein_coding	Stx6	ENSMUST00000193059	nonsense_mediated_decay		1	1	155158719	934
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000232620	retained_intron		16	-1	91622273	503
ENSMUSG00000037325	protein_coding	Bbs7	ENSMUST00000108155	protein_coding		3	-1	36613285	2437
ENSMUSG00000103435	antisense	Gm36992	ENSMUST00000195463	antisense		1	1	176754517	428
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000141186	retained_intron		7	1	143005060	812
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000166615	protein_coding	principal1	8	1	107436365	4314
ENSMUSG00000085682	transcribed_processed_pseudogene	Gm14267	ENSMUST00000226870	processed_transcript		2	-1	166509866	1209
ENSMUSG00000096486	protein_coding	Gm5426	ENSMUST00000074615	protein_coding	principal1	10	1	96136603	312
ENSMUSG00000085682	transcribed_processed_pseudogene	Gm14267	ENSMUST00000228324	processed_transcript		2	-1	166516366	1189
ENSMUSG00000037325	protein_coding	Bbs7	ENSMUST00000199136	retained_intron		3	-1	36577285	1509
ENSMUSG00000085682	transcribed_processed_pseudogene	Gm14267	ENSMUST00000228378	processed_transcript		2	-1	166508071	1691
ENSMUSG00000026470	protein_coding	Stx6	ENSMUST00000195302	protein_coding		1	1	155158748	955
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000207211	protein_coding		7	1	143005144	1220
ENSMUSG00000085682	transcribed_processed_pseudogene	Gm14267	ENSMUST00000228242	processed_transcript		2	-1	166509152	1106
ENSMUSG00000090660	unprocessed_pseudogene	Gm17030	ENSMUST00000167016	unprocessed_pseudogene		14	-1	19677660	393
ENSMUSG00000118021	antisense	Gm50130	ENSMUST00000237423	antisense		19	-1	21833756	837
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000231380	protein_coding		16	-1	91646925	1852
ENSMUSG00000085682	transcribed_processed_pseudogene	Gm14267	ENSMUST00000226637	processed_transcript		2	-1	166509163	982
ENSMUSG00000085682	transcribed_processed_pseudogene	Gm14267	ENSMUST00000228863	processed_transcript		2	-1	166509174	1095
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000120450	protein_coding		16	-1	91646935	1865
ENSMUSG00000085682	transcribed_processed_pseudogene	Gm14267	ENSMUST00000226697	processed_transcript		2	-1	166522373	1299
ENSMUSG00000112762	lincRNA	4930459C07Rik	ENSMUST00000219638	lincRNA		10	1	96226020	1805
ENSMUSG00000037325	protein_coding	Bbs7	ENSMUST00000129671	retained_intron		3	-1	36613389	1288
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000213097	protein_coding		8	1	107436384	425
ENSMUSG00000037325	protein_coding	Bbs7	ENSMUST00000142333	protein_coding		3	-1	36613389	377
ENSMUSG00000112762	lincRNA	4930459C07Rik	ENSMUST00000218720	lincRNA		10	1	96226207	1207
ENSMUSG00000085682	transcribed_processed_pseudogene	Gm14267	ENSMUST00000119751	transcribed_processed_pseudogene		2	-1	166500768	496
ENSMUSG00000085682	transcribed_processed_pseudogene	Gm14267	ENSMUST00000226316	processed_transcript		2	-1	166503660	1107
ENSMUSG00000114885	processed_pseudogene	Gm7371	ENSMUST00000223582	processed_pseudogene		14	-1	19688992	554
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000231702	retained_intron		16	-1	91638427	842
ENSMUSG00000026470	protein_coding	Stx6	ENSMUST00000192519	processed_transcript		1	1	155158771	750
ENSMUSG00000032305	protein_coding	Fam219b	ENSMUST00000114200	protein_coding	principal1	9	1	57537563	3017
ENSMUSG00000085682	transcribed_processed_pseudogene	Gm14267	ENSMUST00000123480	processed_transcript		2	-1	166505584	604
ENSMUSG00000114199	processed_pseudogene	Gm49341	ENSMUST00000223660	processed_pseudogene		14	-1	19697209	330
ENSMUSG00000073489	protein_coding	Ifi204	ENSMUST00000111214	protein_coding	principal1	1	-1	173766919	2296
ENSMUSG00000026470	protein_coding	Stx6	ENSMUST00000191769	retained_intron		1	1	155158799	405
ENSMUSG00000024754	protein_coding	Cemip2	ENSMUST00000236506	retained_intron		19	1	21778344	2954
ENSMUSG00000026470	protein_coding	Stx6	ENSMUST00000192091	retained_intron		1	1	155184310	4029
ENSMUSG00000112234	lincRNA	Gm48427	ENSMUST00000220354	lincRNA		10	1	96309345	1425
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000232367	protein_coding		16	-1	91646921	837
ENSMUSG00000032305	protein_coding	Fam219b	ENSMUST00000215897	retained_intron		9	1	57537617	341
ENSMUSG00000112749	lincRNA	Gm48428	ENSMUST00000218388	lincRNA		10	-1	96345824	580
ENSMUSG00000073489	protein_coding	Ifi204	ENSMUST00000192414	retained_intron		1	-1	173766943	1659
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000231863	retained_intron		16	-1	91643083	455
ENSMUSG00000112290	lincRNA	Gm33782	ENSMUST00000218518	lincRNA		10	1	96310131	517
ENSMUSG00000026470	protein_coding	Stx6	ENSMUST00000195693	retained_intron		1	1	155187382	870
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000231444	protein_coding		16	-1	91646929	439
ENSMUSG00000026470	protein_coding	Stx6	ENSMUST00000192311	retained_intron		1	1	155187826	685
ENSMUSG00000022962	protein_coding	Gart	ENSMUST00000231775	retained_intron		16	-1	91646912	443
ENSMUSG00000026470	protein_coding	Stx6	ENSMUST00000192690	protein_coding		1	1	155191503	1289
ENSMUSG00000085337	antisense	Gm15964	ENSMUST00000138207	antisense		16	1	91611468	2745
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000212906	retained_intron		8	1	107436389	1579
ENSMUSG00000032079	protein_coding	Apoa5	ENSMUST00000121598	protein_coding	principal1	9	1	46268633	2515
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000075172	protein_coding	principal3	7	1	143005638	1876
ENSMUSG00000117128	antisense	Gm49915	ENSMUST00000232747	antisense		17	-1	53500946	558
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000212205	protein_coding		8	1	107436400	2758
ENSMUSG00000026470	protein_coding	Stx6	ENSMUST00000194158	processed_transcript		1	1	155195021	711
ENSMUSG00000027505	protein_coding	Fam209	ENSMUST00000029007	protein_coding	principal1	2	1	172472520	698
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000212645	retained_intron		8	1	107436416	640
ENSMUSG00000051590	protein_coding	Map3k19	ENSMUST00000208183	protein_coding	alternative2	1	-1	127855031	5345
ENSMUSG00000083760	processed_pseudogene	Gm14524	ENSMUST00000121066	processed_pseudogene		X	-1	12914592	683
ENSMUSG00000042622	protein_coding	Maff	ENSMUST00000229130	protein_coding	principal1	15	1	79346621	1873
ENSMUSG00000083307	processed_pseudogene	AA414768	ENSMUST00000121924	processed_pseudogene		X	1	12936872	1257
ENSMUSG00000047428	protein_coding	Dlk2	ENSMUST00000166280	protein_coding	principal1	17	1	46297483	1341
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000145212	nonsense_mediated_decay		7	1	143005663	1795
ENSMUSG00000081793	processed_pseudogene	5730416F02Rik	ENSMUST00000120648	processed_pseudogene		X	1	109001485	812
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000212063	retained_intron		8	1	107483332	1548
ENSMUSG00000083751	processed_pseudogene	Gm14534	ENSMUST00000120045	processed_pseudogene		X	-1	12944966	357
ENSMUSG00000051590	protein_coding	Map3k19	ENSMUST00000238383	protein_coding		1	-1	127840320	1424
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000212737	processed_transcript		8	1	107502568	623
ENSMUSG00000051590	protein_coding	Map3k19	ENSMUST00000189398	protein_coding		1	-1	127840321	1428
ENSMUSG00000087424	processed_transcript	5730405O15Rik	ENSMUST00000127521	processed_transcript		X	1	13042015	1749
ENSMUSG00000081344	processed_pseudogene	Gm14303	ENSMUST00000121320	processed_pseudogene		2	-1	172509691	171
ENSMUSG00000051590	protein_coding	Map3k19	ENSMUST00000191333	protein_coding		1	-1	127840321	1572
ENSMUSG00000079480	protein_coding	Pin4	ENSMUST00000113627	protein_coding	principal1	X	1	102119447	489
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000212012	retained_intron		8	1	107506221	329
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000105923	protein_coding		7	1	143005671	1499
ENSMUSG00000051590	protein_coding	Map3k19	ENSMUST00000187653	protein_coding		1	-1	127840321	3660
ENSMUSG00000087424	processed_transcript	5730405O15Rik	ENSMUST00000130099	processed_transcript		X	1	13042051	853
ENSMUSG00000032079	protein_coding	Apoa5	ENSMUST00000214202	protein_coding		9	1	46269078	435
ENSMUSG00000042622	protein_coding	Maff	ENSMUST00000096350	protein_coding	principal1	15	1	79347520	1958
ENSMUSG00000047428	protein_coding	Dlk2	ENSMUST00000166617	protein_coding	principal1	17	1	46297928	1528
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000212543	protein_coding		8	1	107545012	1996
ENSMUSG00000039720	protein_coding	Got1l1	ENSMUST00000038174	protein_coding	principal1	8	-1	27202547	1356
ENSMUSG00000032079	protein_coding	Apoa5	ENSMUST00000215458	protein_coding		9	1	46269078	358
ENSMUSG00000051590	protein_coding	Map3k19	ENSMUST00000061512	protein_coding	principal2	1	-1	127840290	3936
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000212559	retained_intron		8	1	107550895	2653
ENSMUSG00000042622	protein_coding	Maff	ENSMUST00000163691	protein_coding	principal1	15	1	79348064	1902
ENSMUSG00000032079	protein_coding	Apoa5	ENSMUST00000215187	protein_coding		9	1	46269078	495
ENSMUSG00000047428	protein_coding	Dlk2	ENSMUST00000170271	protein_coding		17	1	46298083	1783
ENSMUSG00000079480	protein_coding	Pin4	ENSMUST00000144367	processed_transcript		X	1	102119569	530
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000082008	protein_coding	alternative2	7	1	143005685	1587
ENSMUSG00000102545	lincRNA	6430573P05Rik	ENSMUST00000192648	lincRNA		3	1	79287173	597
ENSMUSG00000047428	protein_coding	Dlk2	ENSMUST00000061722	protein_coding		17	1	46297421	1532
ENSMUSG00000039720	protein_coding	Got1l1	ENSMUST00000209281	retained_intron		8	-1	27198717	686
ENSMUSG00000032079	protein_coding	Apoa5	ENSMUST00000213878	protein_coding		9	1	46269078	727
ENSMUSG00000081969	processed_pseudogene	Gm16471	ENSMUST00000121940	processed_pseudogene		X	1	102138613	618
ENSMUSG00000102545	lincRNA	6430573P05Rik	ENSMUST00000195547	lincRNA		3	1	79287392	2457
ENSMUSG00000032079	protein_coding	Apoa5	ENSMUST00000034584	protein_coding	principal1	9	1	46269078	2312
ENSMUSG00000042622	protein_coding	Maff	ENSMUST00000229285	protein_coding		15	1	79348402	633
ENSMUSG00000031930	protein_coding	Wwp2	ENSMUST00000212993	retained_intron		8	1	107551337	2098
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000207449	retained_intron		7	1	143005690	4296
ENSMUSG00000102545	lincRNA	6430573P05Rik	ENSMUST00000192562	lincRNA		3	1	79287728	508
ENSMUSG00000034518	protein_coding	Hmgxb4	ENSMUST00000041759	protein_coding	principal1	8	1	74993356	4191
ENSMUSG00000059775	transcribed_processed_pseudogene	Rps26-ps1	ENSMUST00000077208	processed_transcript		8	-1	107439579	449
ENSMUSG00000059775	transcribed_processed_pseudogene	Rps26-ps1	ENSMUST00000212102	transcribed_processed_pseudogene		8	-1	107439564	351
ENSMUSG00000028688	protein_coding	Toe1	ENSMUST00000106455	protein_coding	alternative2	4	-1	116807548	1209
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000105925	protein_coding		7	1	143005699	1376
ENSMUSG00000039720	protein_coding	Got1l1	ENSMUST00000209699	retained_intron		8	-1	27202533	872
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000105924	protein_coding	alternative2	7	1	143005699	1478
ENSMUSG00000039720	protein_coding	Got1l1	ENSMUST00000211002	processed_transcript		8	-1	27223828	434
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000143512	protein_coding		7	1	143005928	557
ENSMUSG00000039720	protein_coding	Got1l1	ENSMUST00000209299	protein_coding		8	-1	27223828	397
ENSMUSG00000034518	protein_coding	Hmgxb4	ENSMUST00000151062	processed_transcript		8	1	74993679	310
ENSMUSG00000017831	protein_coding	Rab5a	ENSMUST00000017975	protein_coding	principal1	17	1	53479234	2366
ENSMUSG00000090774	protein_coding	Vmn2r74	ENSMUST00000233635	nonsense_mediated_decay		7	-1	85961629	10157
ENSMUSG00000000244	protein_coding	Tspan32	ENSMUST00000154264	retained_intron		7	1	143017409	478
ENSMUSG00000017831	protein_coding	Rab5a	ENSMUST00000233347	retained_intron		17	1	53479287	3226
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000114842	protein_coding	principal3	17	1	27909306	5819
ENSMUSG00000051220	protein_coding	Ercc6l	ENSMUST00000056904	protein_coding	principal1	X	-1	102157091	5302
ENSMUSG00000046049	protein_coding	Rp1l1	ENSMUST00000058229	protein_coding	principal1	14	1	63992506	6684
ENSMUSG00000052281	antisense	Tspan32os	ENSMUST00000131740	antisense		7	-1	143008033	975
ENSMUSG00000028688	protein_coding	Toe1	ENSMUST00000030451	protein_coding	principal2	4	-1	116807640	2090
ENSMUSG00000034518	protein_coding	Hmgxb4	ENSMUST00000145919	nonsense_mediated_decay		8	1	74993679	3989
ENSMUSG00000059498	protein_coding	Fcgr3	ENSMUST00000164044	protein_coding	principal2	1	-1	171059403	1347
ENSMUSG00000052281	antisense	Tspan32os	ENSMUST00000165444	antisense		7	-1	142990778	423
ENSMUSG00000034518	protein_coding	Hmgxb4	ENSMUST00000134126	processed_transcript		8	1	74993691	445
ENSMUSG00000085686	processed_pseudogene	Gm9498	ENSMUST00000140849	processed_pseudogene		X	-1	4771068	291
ENSMUSG00000084142	processed_pseudogene	Gm9103	ENSMUST00000119371	processed_pseudogene		X	-1	102178657	405
ENSMUSG00000095657	processed_pseudogene	Gm15252	ENSMUST00000177750	processed_pseudogene		X	1	4796663	883
ENSMUSG00000028688	protein_coding	Toe1	ENSMUST00000154945	processed_transcript		4	-1	116805192	433
ENSMUSG00000046049	protein_coding	Rp1l1	ENSMUST00000224314	processed_transcript		14	1	64029873	1730
ENSMUSG00000059498	protein_coding	Fcgr3	ENSMUST00000169017	protein_coding	alternative2	1	-1	171059403	1324
ENSMUSG00000044957	protein_coding	Pp2d1	ENSMUST00000056198	protein_coding	principal1	17	-1	53539451	2476
ENSMUSG00000034518	protein_coding	Hmgxb4	ENSMUST00000211863	protein_coding		8	1	74993695	512
ENSMUSG00000115971	lincRNA	Gm10856	ENSMUST00000230701	lincRNA		15	1	79843163	2556
ENSMUSG00000028688	protein_coding	Toe1	ENSMUST00000154195	retained_intron		4	-1	116805605	856
ENSMUSG00000116283	TEC	Gm49412	ENSMUST00000229056	TEC		15	1	79873869	3355
ENSMUSG00000059498	protein_coding	Fcgr3	ENSMUST00000164179	protein_coding		1	-1	171064935	547
ENSMUSG00000034518	protein_coding	Hmgxb4	ENSMUST00000133585	retained_intron		8	1	74993712	609
ENSMUSG00000090774	protein_coding	Vmn2r74	ENSMUST00000232886	protein_coding	alternative2	7	-1	85961629	9953
ENSMUSG00000034518	protein_coding	Hmgxb4	ENSMUST00000212372	processed_transcript		8	1	74999869	682
ENSMUSG00000028688	protein_coding	Toe1	ENSMUST00000145468	nonsense_mediated_decay		4	-1	116806523	1097
ENSMUSG00000090774	protein_coding	Vmn2r74	ENSMUST00000232758	protein_coding	alternative2	7	-1	85961629	9890
ENSMUSG00000090222	unprocessed_pseudogene	Ifi203-ps	ENSMUST00000155076	unprocessed_pseudogene		1	-1	173798270	2556
ENSMUSG00000076896	TR_J_gene	Traj33	ENSMUST00000103708	TR_J_gene	principal1	14	1	54185358	57
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000088027	protein_coding	alternative2	17	1	27909317	6838
ENSMUSG00000102187	unprocessed_pseudogene	Gm7897	ENSMUST00000193981	unprocessed_pseudogene		1	-1	173832254	554
ENSMUSG00000090774	protein_coding	Vmn2r74	ENSMUST00000166355	protein_coding	principal2	7	-1	85961629	9962
ENSMUSG00000034518	protein_coding	Hmgxb4	ENSMUST00000109940	protein_coding		8	1	75016222	2656
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000233525	protein_coding	alternative2	17	1	27909333	5717
ENSMUSG00000028688	protein_coding	Toe1	ENSMUST00000134612	retained_intron		4	-1	116806600	780
ENSMUSG00000105960	antisense	6330410L21Rik	ENSMUST00000199846	antisense		3	1	129753758	3871
ENSMUSG00000031245	protein_coding	Hmgn5	ENSMUST00000033597	protein_coding	principal1	X	-1	109013404	1934
ENSMUSG00000034518	protein_coding	Hmgxb4	ENSMUST00000129391	retained_intron		8	1	75022855	529
ENSMUSG00000085637	antisense	1700048M11Rik	ENSMUST00000132861	antisense		16	-1	92312468	485
ENSMUSG00000076897	TR_J_gene	Traj32	ENSMUST00000103709	TR_J_gene	principal1	14	1	54186101	66
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000192664	protein_coding		1	-1	176755333	4031
ENSMUSG00000105596	antisense	Gm42650	ENSMUST00000197038	antisense		3	1	129745340	575
ENSMUSG00000110593	antisense	Gm45822	ENSMUST00000212231	antisense		8	-1	75033941	259
ENSMUSG00000106290	TEC	Gm43429	ENSMUST00000197889	TEC		3	1	135860348	2251
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000232742	retained_intron		17	1	27909365	634
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000025058	protein_coding	alternative2	17	1	27909372	6846
ENSMUSG00000106120	antisense	Gm42697	ENSMUST00000198992	antisense		3	1	129728845	4092
ENSMUSG00000110433	antisense	Gm45820	ENSMUST00000212068	antisense		8	-1	75045246	362
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000233866	protein_coding		17	1	27909558	819
ENSMUSG00000081841	processed_pseudogene	Gm13444	ENSMUST00000119445	processed_pseudogene		2	-1	35483905	522
ENSMUSG00000106306	processed_transcript	4933401H06Rik	ENSMUST00000200529	macro_lncRNA		3	-1	135840269	1202
ENSMUSG00000105645	processed_pseudogene	Gm6649	ENSMUST00000199743	processed_pseudogene		3	1	115943097	1165
ENSMUSG00000076898	TR_J_gene	Traj31	ENSMUST00000103710	TR_J_gene	principal1	14	1	54187895	57
ENSMUSG00000028688	protein_coding	Toe1	ENSMUST00000149895	processed_transcript		4	-1	116807606	659
ENSMUSG00000081421	processed_pseudogene	Gm13445	ENSMUST00000121664	processed_pseudogene		2	-1	35491519	307
ENSMUSG00000106306	processed_transcript	4933401H06Rik	ENSMUST00000199058	antisense		3	-1	135840269	827
ENSMUSG00000028688	protein_coding	Toe1	ENSMUST00000146246	retained_intron		4	-1	116807548	909
ENSMUSG00000054414	protein_coding	Slc30a7	ENSMUST00000198571	processed_transcript		3	-1	115943009	1326
ENSMUSG00000054675	protein_coding	Tmem119	ENSMUST00000067853	protein_coding	principal1	5	-1	113800516	2242
ENSMUSG00000105681	TEC	Gm43428	ENSMUST00000200108	TEC		3	1	135872113	3845
ENSMUSG00000085668	lincRNA	Gm35202	ENSMUST00000130083	lincRNA		2	1	35503531	712
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000139173	protein_coding		17	1	28007345	4517
ENSMUSG00000005681	protein_coding	Apoa2	ENSMUST00000111321	protein_coding	principal1	1	1	171225054	518
ENSMUSG00000051989	protein_coding	Smim11	ENSMUST00000063641	protein_coding	principal1	16	1	92301286	517
ENSMUSG00000054675	protein_coding	Tmem119	ENSMUST00000160374	protein_coding		5	-1	113800446	336
ENSMUSG00000113927	TEC	5330409N07Rik	ENSMUST00000222069	TEC		12	-1	98448334	3518
ENSMUSG00000051989	protein_coding	Smim11	ENSMUST00000118064	protein_coding	principal1	16	1	92301296	782
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000233869	protein_coding		17	1	28040775	967
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000233298	protein_coding		17	1	28041737	1092
ENSMUSG00000113613	antisense	Gm40893	ENSMUST00000220507	antisense		12	1	98523844	1508
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000233058	protein_coding		17	1	28042441	352
ENSMUSG00000014601	protein_coding	Strip1	ENSMUST00000200049	retained_intron		3	-1	107614081	1550
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000232872	protein_coding		17	1	28042615	4485
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000233309	protein_coding		17	1	28054333	1099
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000040179	protein_coding	principal3	12	1	85824710	5081
ENSMUSG00000024219	protein_coding	Anks1	ENSMUST00000232769	retained_intron		17	1	28057441	744
ENSMUSG00000005681	protein_coding	Apoa2	ENSMUST00000005824	protein_coding	principal1	1	1	171225082	492
ENSMUSG00000031320	protein_coding	Rps4x	ENSMUST00000033683	protein_coding	principal1	X	-1	102189394	975
ENSMUSG00000031246	protein_coding	Sh3bgrl	ENSMUST00000033598	protein_coding	principal1	X	1	109095365	2882
ENSMUSG00000005681	protein_coding	Apoa2	ENSMUST00000111320	protein_coding	principal1	1	1	171225084	470
ENSMUSG00000031320	protein_coding	Rps4x	ENSMUST00000155028	retained_intron		X	-1	102186737	558
ENSMUSG00000005681	protein_coding	Apoa2	ENSMUST00000111319	protein_coding	principal1	1	1	171225091	458
ENSMUSG00000031320	protein_coding	Rps4x	ENSMUST00000152739	retained_intron		X	-1	102189336	784
ENSMUSG00000031246	protein_coding	Sh3bgrl	ENSMUST00000126097	processed_transcript		X	1	109113972	361
ENSMUSG00000031246	protein_coding	Sh3bgrl	ENSMUST00000133614	processed_transcript		X	1	109095509	670
ENSMUSG00000094672	protein_coding	Vmn2r25	ENSMUST00000162046	protein_coding	principal1	6	-1	123853463	4009
ENSMUSG00000094672	protein_coding	Vmn2r25	ENSMUST00000233160	nonsense_mediated_decay		6	-1	123853463	9030
ENSMUSG00000094672	protein_coding	Vmn2r25	ENSMUST00000233622	nonsense_mediated_decay		6	-1	123853463	4139
ENSMUSG00000054412	antisense	Gm4793	ENSMUST00000067468	antisense		1	1	135584773	2616
ENSMUSG00000038437	protein_coding	Mllt6	ENSMUST00000044730	protein_coding	principal2	11	1	97663414	7274
ENSMUSG00000102474	TEC	2610012C04Rik	ENSMUST00000193434	TEC		1	-1	135481414	1023
ENSMUSG00000104524	TEC	Gm37333	ENSMUST00000192904	TEC		1	-1	135525338	2251
ENSMUSG00000048621	protein_coding	Gm6377	ENSMUST00000060013	protein_coding	principal1	X	1	109196758	2793
ENSMUSG00000048621	protein_coding	Gm6377	ENSMUST00000139259	protein_coding		X	1	109196756	411
ENSMUSG00000054414	protein_coding	Slc30a7	ENSMUST00000067485	protein_coding	principal1	3	-1	116007406	9020
ENSMUSG00000083210	processed_pseudogene	Gm14869	ENSMUST00000119007	processed_pseudogene		X	-1	109121684	884
ENSMUSG00000072780	protein_coding	Vmn2r24	ENSMUST00000075095	protein_coding	principal1	6	1	123778879	11289
ENSMUSG00000054414	protein_coding	Slc30a7	ENSMUST00000197847	processed_transcript		3	-1	115992731	359
ENSMUSG00000072780	protein_coding	Vmn2r24	ENSMUST00000233759	protein_coding		6	1	123778879	10482
ENSMUSG00000054414	protein_coding	Slc30a7	ENSMUST00000197333	retained_intron		3	-1	115993943	2210
ENSMUSG00000072780	protein_coding	Vmn2r24	ENSMUST00000232985	protein_coding		6	1	123778879	11165
ENSMUSG00000104723	processed_pseudogene	Gm43106	ENSMUST00000199485	processed_pseudogene		3	1	115942482	637
ENSMUSG00000010406	protein_coding	Mrpl52	ENSMUST00000010550	protein_coding	principal1	14	1	54426909	418
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000176695	nonsense_mediated_decay		12	1	85824968	4168
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000040273	protein_coding	alternative2	12	1	85824969	4147
ENSMUSG00000010406	protein_coding	Mrpl52	ENSMUST00000228871	retained_intron		14	1	54426912	134
ENSMUSG00000010406	protein_coding	Mrpl52	ENSMUST00000199153	retained_intron		14	1	54426922	856
ENSMUSG00000038437	protein_coding	Mllt6	ENSMUST00000155835	processed_transcript		11	1	97663572	4225
ENSMUSG00000038437	protein_coding	Mllt6	ENSMUST00000107586	protein_coding	alternative2	11	1	97663572	7206
ENSMUSG00000038437	protein_coding	Mllt6	ENSMUST00000134158	processed_transcript		11	1	97665001	666
ENSMUSG00000010406	protein_coding	Mrpl52	ENSMUST00000200217	retained_intron		14	1	54426923	363
ENSMUSG00000038437	protein_coding	Mllt6	ENSMUST00000151729	processed_transcript		11	1	97676052	552
ENSMUSG00000038437	protein_coding	Mllt6	ENSMUST00000143220	processed_transcript		11	1	97676052	641
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000176008	processed_transcript		12	1	85824978	5482
ENSMUSG00000020163	protein_coding	Uqcr11	ENSMUST00000138428	processed_transcript		10	-1	80406766	520
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000110224	protein_coding	alternative2	12	1	85824978	4647
ENSMUSG00000010406	protein_coding	Mrpl52	ENSMUST00000199195	protein_coding		14	1	54426930	463
ENSMUSG00000010406	protein_coding	Mrpl52	ENSMUST00000199689	retained_intron		14	1	54427040	429
ENSMUSG00000033854	protein_coding	Kcnk10	ENSMUST00000221240	protein_coding	principal2	12	-1	98578310	7460
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000142411	protein_coding		12	1	85824985	650
ENSMUSG00000010406	protein_coding	Mrpl52	ENSMUST00000196273	protein_coding		14	1	54427051	277
ENSMUSG00000033854	protein_coding	Kcnk10	ENSMUST00000110113	protein_coding	alternative2	12	-1	98575127	2629
ENSMUSG00000033854	protein_coding	Kcnk10	ENSMUST00000221305	protein_coding		12	-1	98574712	1357
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000124701	retained_intron		12	1	85825021	2165
ENSMUSG00000020137	protein_coding	Thap2	ENSMUST00000218842	protein_coding	principal1	10	-1	115384435	4970
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000153570	nonsense_mediated_decay		12	1	85825021	655
ENSMUSG00000020163	protein_coding	Uqcr11	ENSMUST00000020372	protein_coding	principal1	10	-1	80406830	445
ENSMUSG00000033854	protein_coding	Kcnk10	ENSMUST00000221906	retained_intron		12	-1	98532062	1098
ENSMUSG00000020137	protein_coding	Thap2	ENSMUST00000020346	protein_coding		10	-1	115384410	3681
ENSMUSG00000057346	protein_coding	Apol9a	ENSMUST00000089452	protein_coding	principal1	15	-1	77411034	1527
ENSMUSG00000020137	protein_coding	Thap2	ENSMUST00000218989	protein_coding		10	-1	115384443	527
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000195717	protein_coding	principal2	1	-1	176814067	6967
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000155448	nonsense_mediated_decay		12	1	85825075	4534
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000177114	nonsense_mediated_decay		12	1	85826484	3999
ENSMUSG00000020163	protein_coding	Uqcr11	ENSMUST00000141683	processed_transcript		10	-1	80406795	605
ENSMUSG00000116965	lincRNA	Gm36742	ENSMUST00000231748	lincRNA		16	-1	39188906	991
ENSMUSG00000057346	protein_coding	Apol9a	ENSMUST00000081776	protein_coding	principal1	15	-1	77411135	1530
ENSMUSG00000092263	unprocessed_pseudogene	Vmn2r-ps79	ENSMUST00000174256	unprocessed_pseudogene		7	1	85967016	377
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000130802	protein_coding		X	1	74393327	779
ENSMUSG00000024754	protein_coding	Cemip2	ENSMUST00000025663	protein_coding	principal1	19	1	21778358	6602
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000175899	retained_intron		12	1	85878986	636
ENSMUSG00000116573	lincRNA	Gm36903	ENSMUST00000231761	lincRNA		16	1	39446749	1094
ENSMUSG00000092529	unprocessed_pseudogene	Vmn2r-ps80	ENSMUST00000173697	unprocessed_pseudogene		7	-1	85999624	933
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000194727	protein_coding	alternative2	1	-1	176793609	6784
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000176460	protein_coding		12	1	85912560	902
ENSMUSG00000099945	lincRNA	1700126A01Rik	ENSMUST00000185283	lincRNA		1	1	57127340	2061
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000177168	protein_coding		12	1	85917779	3005
ENSMUSG00000098070	processed_pseudogene	Gm8609	ENSMUST00000182967	processed_pseudogene		16	1	39934002	998
ENSMUSG00000057346	protein_coding	Apol9a	ENSMUST00000231161	protein_coding		15	-1	77406565	441
ENSMUSG00000104972	processed_pseudogene	Gm19931	ENSMUST00000198920	processed_pseudogene		5	1	113817225	368
ENSMUSG00000036934	protein_coding	4921524J17Rik	ENSMUST00000047749	protein_coding	principal1	8	-1	85432833	1587
ENSMUSG00000024754	protein_coding	Cemip2	ENSMUST00000237802	protein_coding		19	1	21778368	1096
ENSMUSG00000057346	protein_coding	Apol9a	ENSMUST00000229175	retained_intron		15	-1	77411027	4246
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000176937	protein_coding		12	1	85923008	1223
ENSMUSG00000092608	unprocessed_pseudogene	Vmn2r-ps81	ENSMUST00000172519	unprocessed_pseudogene		7	1	86026716	857
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000177525	protein_coding		12	1	85932782	1788
ENSMUSG00000036934	protein_coding	4921524J17Rik	ENSMUST00000209355	nonsense_mediated_decay		8	-1	85432821	419
ENSMUSG00000024754	protein_coding	Cemip2	ENSMUST00000238079	retained_intron		19	1	21778388	2159
ENSMUSG00000036934	protein_coding	4921524J17Rik	ENSMUST00000210556	processed_transcript		8	-1	85432814	398
ENSMUSG00000032193	protein_coding	Ldlr	ENSMUST00000034713	protein_coding	principal2	9	1	21723483	4627
ENSMUSG00000024754	protein_coding	Cemip2	ENSMUST00000096194	protein_coding	principal1	19	1	21778342	6667
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000175844	nonsense_mediated_decay		12	1	85939389	1297
ENSMUSG00000101429	lincRNA	BC055402	ENSMUST00000190488	lincRNA		1	-1	57214993	3301
ENSMUSG00000103341	TEC	1700051O22Rik	ENSMUST00000195451	TEC		8	1	85432686	638
ENSMUSG00000012609	protein_coding	Ttll5	ENSMUST00000220906	processed_transcript		12	1	85962001	1039
ENSMUSG00000103341	TEC	1700051O22Rik	ENSMUST00000194864	TEC		8	1	85432686	630
ENSMUSG00000055065	protein_coding	Ddx17	ENSMUST00000054014	protein_coding	principal2	15	-1	79546741	4732
ENSMUSG00000092330	unprocessed_pseudogene	Vmn2r-ps82	ENSMUST00000174222	unprocessed_pseudogene		7	-1	86063461	2052
ENSMUSG00000109790	processed_pseudogene	Gm45594	ENSMUST00000211717	processed_pseudogene		8	-1	85414515	241
ENSMUSG00000058715	protein_coding	Fcer1g	ENSMUST00000079957	protein_coding	principal1	1	-1	171234365	674
ENSMUSG00000101129	processed_pseudogene	Gm5254	ENSMUST00000188353	processed_pseudogene		1	-1	57292401	977
ENSMUSG00000055065	protein_coding	Ddx17	ENSMUST00000229877	protein_coding	alternative2	15	-1	79546741	4726
ENSMUSG00000114051	processed_transcript	Gm48008	ENSMUST00000222693	processed_transcript		12	1	86078644	667
ENSMUSG00000103301	TEC	Gm37804	ENSMUST00000192206	TEC		12	1	86069173	547
ENSMUSG00000092357	unprocessed_pseudogene	Vmn2r-ps83	ENSMUST00000173787	unprocessed_pseudogene		7	-1	86083782	2368
ENSMUSG00000055065	protein_coding	Ddx17	ENSMUST00000231053	protein_coding		15	-1	79546555	3379
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000194489	retained_intron		1	-1	176750511	3051
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000192927	protein_coding		1	-1	176756516	3905
ENSMUSG00000058715	protein_coding	Fcer1g	ENSMUST00000193973	protein_coding		1	-1	171234307	683
ENSMUSG00000055065	protein_coding	Ddx17	ENSMUST00000229431	protein_coding		15	-1	79546559	2821
ENSMUSG00000058715	protein_coding	Fcer1g	ENSMUST00000150997	retained_intron		1	-1	171234339	361
ENSMUSG00000020716	protein_coding	Nf1	ENSMUST00000219057	protein_coding		11	1	79339792	4354
ENSMUSG00000042590	protein_coding	Ipo11	ENSMUST00000186033	protein_coding		13	-1	106925150	4147
ENSMUSG00000048163	protein_coding	Selplg	ENSMUST00000201931	protein_coding		5	-1	113819566	694
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000177293	nonsense_mediated_decay		9	-1	105461030	2476
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000195433	nonsense_mediated_decay		1	-1	176793619	6299
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000192991	protein_coding		1	-1	176750160	1571
ENSMUSG00000053897	protein_coding	Slc39a8	ENSMUST00000081978	protein_coding	principal1	3	1	135825279	3314
ENSMUSG00000032193	protein_coding	Ldlr	ENSMUST00000215917	retained_intron		9	1	21723599	2383
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000194984	processed_transcript		1	-1	176754397	1256
ENSMUSG00000014601	protein_coding	Strip1	ENSMUST00000064759	protein_coding	principal1	3	-1	107631694	3215
ENSMUSG00000032193	protein_coding	Ldlr	ENSMUST00000213114	protein_coding	alternative2	9	1	21723632	4318
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000193765	retained_intron		1	-1	176743104	2623
ENSMUSG00000048163	protein_coding	Selplg	ENSMUST00000100874	protein_coding	principal1	5	-1	113830501	1855
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000193098	retained_intron		1	-1	176778258	5529
ENSMUSG00000032193	protein_coding	Ldlr	ENSMUST00000217111	retained_intron		9	1	21723639	2854
ENSMUSG00000053897	protein_coding	Slc39a8	ENSMUST00000139953	retained_intron		3	1	135825654	2762
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000194371	protein_coding		1	-1	176782300	473
ENSMUSG00000042590	protein_coding	Ipo11	ENSMUST00000080856	protein_coding	principal1	13	-1	106936958	4325
ENSMUSG00000032193	protein_coding	Ldlr	ENSMUST00000214359	retained_intron		9	1	21723641	1739
ENSMUSG00000053897	protein_coding	Slc39a8	ENSMUST00000029810	protein_coding	principal1	3	1	135826090	3203
ENSMUSG00000010830	protein_coding	Kdelr3	ENSMUST00000010974	protein_coding	principal1	15	1	79516411	1411
ENSMUSG00000032193	protein_coding	Ldlr	ENSMUST00000217613	retained_intron		9	1	21736107	3980
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000192961	protein_coding		1	-1	176814067	2708
ENSMUSG00000048163	protein_coding	Selplg	ENSMUST00000201194	protein_coding		5	-1	113819257	386
ENSMUSG00000048163	protein_coding	Selplg	ENSMUST00000202555	protein_coding		5	-1	113819317	413
ENSMUSG00000032193	protein_coding	Ldlr	ENSMUST00000214549	retained_intron		9	1	21745323	3049
ENSMUSG00000048163	protein_coding	Selplg	ENSMUST00000199109	protein_coding		5	-1	113832644	359
ENSMUSG00000053897	protein_coding	Slc39a8	ENSMUST00000133810	retained_intron		3	1	135884160	4212
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000192643	retained_intron		1	-1	176807130	523
ENSMUSG00000048163	protein_coding	Selplg	ENSMUST00000198891	retained_intron		5	-1	113830472	2314
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000194263	protein_coding		1	-1	176807124	440
ENSMUSG00000053897	protein_coding	Slc39a8	ENSMUST00000167390	protein_coding	principal1	3	1	135825790	3533
ENSMUSG00000097519	lincRNA	4930558J18Rik	ENSMUST00000181949	lincRNA		1	-1	57377544	2052
ENSMUSG00000057335	protein_coding	Cep170	ENSMUST00000057037	protein_coding	principal2	1	-1	176807124	6930
ENSMUSG00000085053	lincRNA	Gm14809	ENSMUST00000152025	lincRNA		X	-1	99418895	695
ENSMUSG00000030505	protein_coding	Prmt3	ENSMUST00000140656	processed_transcript		7	1	49778346	986
ENSMUSG00000053897	protein_coding	Slc39a8	ENSMUST00000180196	protein_coding	principal1	3	1	135825657	3383
ENSMUSG00000103634	TEC	3110062G12Rik	ENSMUST00000192113	TEC		1	-1	176746982	1419
ENSMUSG00000082226	processed_pseudogene	Gm715	ENSMUST00000117865	processed_pseudogene		X	1	60548019	831
ENSMUSG00000104154	TEC	Gm38104	ENSMUST00000195121	TEC		1	-1	176753415	1895
ENSMUSG00000108240	processed_pseudogene	Gm5317	ENSMUST00000204445	processed_pseudogene		6	1	123886396	847
ENSMUSG00000084331	processed_pseudogene	Gm8163	ENSMUST00000122020	processed_pseudogene		X	-1	60727448	1060
ENSMUSG00000092532	unprocessed_pseudogene	Vmn2r-ps84	ENSMUST00000173377	unprocessed_pseudogene		7	1	86126333	897
ENSMUSG00000042590	protein_coding	Ipo11	ENSMUST00000190801	nonsense_mediated_decay		13	-1	106847430	1952
ENSMUSG00000104362	TEC	Gm37928	ENSMUST00000193265	TEC		3	1	118530883	4131
ENSMUSG00000034566	protein_coding	Atp5h	ENSMUST00000141474	processed_transcript		11	-1	115417018	420
ENSMUSG00000102729	TEC	Gm32444	ENSMUST00000195147	TEC		3	1	118537021	3511
ENSMUSG00000014601	protein_coding	Strip1	ENSMUST00000196416	processed_transcript		3	-1	107626844	3302
ENSMUSG00000034566	protein_coding	Atp5h	ENSMUST00000137563	processed_transcript		11	-1	115418022	510
ENSMUSG00000073051	lincRNA	Gm14812	ENSMUST00000156494	lincRNA		X	-1	99443797	1794
ENSMUSG00000042590	protein_coding	Ipo11	ENSMUST00000190794	retained_intron		13	-1	106858047	2248
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000079413	protein_coding	principal1	17	-1	28486149	3543
ENSMUSG00000057072	protein_coding	Spata45	ENSMUST00000192151	protein_coding	principal1	1	1	191036639	443
ENSMUSG00000085553	antisense	Gm14808	ENSMUST00000129259	antisense		X	1	99459025	361
ENSMUSG00000118415	protein_coding	Gm2411	ENSMUST00000238410	protein_coding	principal1	X	1	123346764	857
ENSMUSG00000042590	protein_coding	Ipo11	ENSMUST00000191312	retained_intron		13	-1	106836321	611
ENSMUSG00000038323	protein_coding	1700066M21Rik	ENSMUST00000042734	protein_coding	principal1	1	1	57377620	3008
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000135165	protein_coding		X	1	74424534	944
ENSMUSG00000042590	protein_coding	Ipo11	ENSMUST00000185993	retained_intron		13	-1	106848464	460
ENSMUSG00000014601	protein_coding	Strip1	ENSMUST00000197192	processed_transcript		3	-1	107620075	394
ENSMUSG00000014601	protein_coding	Strip1	ENSMUST00000198424	retained_intron		3	-1	107631694	2175
ENSMUSG00000038323	protein_coding	1700066M21Rik	ENSMUST00000185952	processed_transcript		1	1	57377633	541
ENSMUSG00000057072	protein_coding	Spata45	ENSMUST00000077889	protein_coding	principal1	1	1	191036819	432
ENSMUSG00000038323	protein_coding	1700066M21Rik	ENSMUST00000187255	processed_transcript		1	1	57377640	344
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000177350	protein_coding		15	1	79891659	759
ENSMUSG00000094288	lincRNA	Astx2	ENSMUST00000179135	lincRNA		X	-1	123451890	1150
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000114792	protein_coding	principal1	17	-1	28517524	3858
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000023444	protein_coding	principal2	16	1	17508688	3394
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000233102	protein_coding	principal1	17	-1	28511357	3486
ENSMUSG00000076899	TR_J_gene	Traj30	ENSMUST00000103711	TR_J_gene	principal1	14	1	54189866	59
ENSMUSG00000106141	processed_pseudogene	Gm18330	ENSMUST00000199246	processed_pseudogene		3	-1	135902841	547
ENSMUSG00000038312	protein_coding	Edem2	ENSMUST00000040833	protein_coding	principal1	2	-1	155729475	2290
ENSMUSG00000094999	lincRNA	Gm17412	ENSMUST00000189566	lincRNA		X	-1	123483814	174
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000233870	protein_coding		17	-1	28486093	1414
ENSMUSG00000094999	lincRNA	Gm17412	ENSMUST00000179261	lincRNA		X	-1	123483808	468
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000233372	processed_transcript		17	-1	28418504	615
ENSMUSG00000095277	processed_pseudogene	Rps12-ps22	ENSMUST00000179382	processed_pseudogene		X	1	123514427	402
ENSMUSG00000034403	protein_coding	Pja1	ENSMUST00000113792	protein_coding	principal4	X	-1	99471273	3038
ENSMUSG00000042590	protein_coding	Ipo11	ENSMUST00000186005	retained_intron		13	-1	106936945	2484
ENSMUSG00000093385	transcribed_unprocessed_pseudogene	A330044P14Rik	ENSMUST00000176108	processed_transcript		6	-1	123982173	2706
ENSMUSG00000038312	protein_coding	Edem2	ENSMUST00000139868	retained_intron		2	-1	155716359	727
ENSMUSG00000093385	transcribed_unprocessed_pseudogene	A330044P14Rik	ENSMUST00000203311	transcribed_unprocessed_pseudogene		6	-1	123978041	1683
ENSMUSG00000095474	protein_coding	Cldn34c2	ENSMUST00000238499	protein_coding	principal1	X	1	123576286	857
ENSMUSG00000108198	unprocessed_pseudogene	Gm44823	ENSMUST00000204775	unprocessed_pseudogene		6	-1	123939493	1107
ENSMUSG00000095474	protein_coding	Cldn34c2	ENSMUST00000178457	protein_coding		X	1	123581700	702
ENSMUSG00000034403	protein_coding	Pja1	ENSMUST00000036354	protein_coding	principal4	X	-1	99470692	2563
ENSMUSG00000106011	processed_pseudogene	Gm43833	ENSMUST00000198828	processed_pseudogene		3	1	153749299	293
ENSMUSG00000038312	protein_coding	Edem2	ENSMUST00000148571	processed_transcript		2	-1	155713318	936
ENSMUSG00000038312	protein_coding	Edem2	ENSMUST00000131350	retained_intron		2	-1	155710986	685
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000233307	processed_transcript		17	-1	28418527	817
ENSMUSG00000028017	protein_coding	Egf	ENSMUST00000029653	protein_coding	principal1	3	-1	129755316	4761
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000143685	processed_transcript		17	-1	28428629	838
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000232939	processed_transcript		17	-1	28441053	956
ENSMUSG00000062046	lincRNA	5730460C07Rik	ENSMUST00000081193	lincRNA		3	-1	153792087	1834
ENSMUSG00000118423	transcribed_unitary_pseudogene	Lrrc70	ENSMUST00000057427	processed_transcript		13	-1	106847267	1763
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000153744	protein_coding		17	-1	28441722	777
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000231538	retained_intron		16	1	17508973	469
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000233747	processed_transcript		17	-1	28441010	749
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000233291	protein_coding		17	-1	28441714	2431
ENSMUSG00000102433	unprocessed_pseudogene	Gm38050	ENSMUST00000191904	unprocessed_pseudogene		1	-1	173850780	238
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000233917	processed_transcript		17	-1	28517514	309
ENSMUSG00000118423	transcribed_unitary_pseudogene	Lrrc70	ENSMUST00000191256	processed_transcript		13	-1	106836309	995
ENSMUSG00000118423	transcribed_unitary_pseudogene	Lrrc70	ENSMUST00000238649	transcribed_unitary_pseudogene		13	-1	106835802	1810
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000232690	processed_transcript		17	-1	28517527	436
ENSMUSG00000090436	protein_coding	Vmn2r75	ENSMUST00000167830	protein_coding	principal1	7	-1	86171778	5372
ENSMUSG00000090272	protein_coding	Mndal	ENSMUST00000220623	processed_transcript		1	-1	173862499	512
ENSMUSG00000085536	lincRNA	Gm14950	ENSMUST00000149500	lincRNA		X	-1	123666949	1155
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000147716	retained_intron		17	-1	28507406	2247
ENSMUSG00000101308	antisense	Gm28989	ENSMUST00000187867	antisense		13	1	106788070	1613
ENSMUSG00000024222	protein_coding	Fkbp5	ENSMUST00000177939	protein_coding	principal1	17	-1	28517524	3844
ENSMUSG00000034623	protein_coding	Prss55	ENSMUST00000171503	protein_coding		14	-1	64085451	1074
ENSMUSG00000034403	protein_coding	Pja1	ENSMUST00000113797	protein_coding	alternative2	X	-1	99470672	1676
ENSMUSG00000117084	antisense	Gm22146	ENSMUST00000232983	antisense		17	1	28446500	2191
ENSMUSG00000117313	sense_intronic	Gm49838	ENSMUST00000233201	sense_intronic		17	-1	28426430	1708
ENSMUSG00000034403	protein_coding	Pja1	ENSMUST00000113790	protein_coding	alternative2	X	-1	99470687	2108
ENSMUSG00000117294	TEC	Gm49839	ENSMUST00000233091	TEC		17	-1	28461095	3612
ENSMUSG00000034623	protein_coding	Prss55	ENSMUST00000089338	protein_coding	principal1	14	-1	64085408	1032
ENSMUSG00000034403	protein_coding	Pja1	ENSMUST00000167246	protein_coding	principal4	X	-1	99470735	2666
ENSMUSG00000034623	protein_coding	Prss55	ENSMUST00000169113	processed_transcript		14	-1	64090162	613
ENSMUSG00000082505	processed_pseudogene	Gm14816	ENSMUST00000117174	processed_pseudogene		X	-1	99687774	294
ENSMUSG00000083682	processed_pseudogene	Pcna-ps1	ENSMUST00000118453	processed_pseudogene		X	1	99796471	738
ENSMUSG00000038997	protein_coding	Asb17	ENSMUST00000044089	protein_coding	principal1	3	1	153844209	2553
ENSMUSG00000025323	protein_coding	Sp4	ENSMUST00000026367	protein_coding	alternative2	12	-1	118301370	5694
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000232379	retained_intron		16	1	17508973	2621
ENSMUSG00000038997	protein_coding	Asb17	ENSMUST00000198849	nonsense_mediated_decay		3	1	153844266	1052
ENSMUSG00000090272	protein_coding	Mndal	ENSMUST00000186442	protein_coding	alternative2	1	-1	173875860	1646
ENSMUSG00000086438	antisense	Asb17os	ENSMUST00000200329	antisense		3	-1	153852401	497
ENSMUSG00000025323	protein_coding	Sp4	ENSMUST00000222314	protein_coding	principal2	12	-1	118301368	2677
ENSMUSG00000034566	protein_coding	Atp5h	ENSMUST00000106537	protein_coding	principal1	11	-1	115419917	682
ENSMUSG00000052099	protein_coding	Prss51	ENSMUST00000063785	protein_coding		14	1	64086234	961
ENSMUSG00000091685	protein_coding	Gm17359	ENSMUST00000195157	protein_coding		3	1	79336661	497
ENSMUSG00000055116	protein_coding	Arntl	ENSMUST00000047321	protein_coding	principal1	7	1	113207465	2908
ENSMUSG00000025323	protein_coding	Sp4	ENSMUST00000221844	protein_coding		12	-1	118301440	378
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000231994	nonsense_mediated_decay		16	1	17508989	3809
ENSMUSG00000030739	protein_coding	Myh14	ENSMUST00000107899	protein_coding	principal3	7	-1	44665501	6390
ENSMUSG00000023186	protein_coding	Vwa5a	ENSMUST00000001544	protein_coding	principal1	9	1	38718268	4157
ENSMUSG00000055116	protein_coding	Arntl	ENSMUST00000210074	protein_coding		7	1	113207526	2554
ENSMUSG00000052099	protein_coding	Prss51	ENSMUST00000224112	protein_coding	principal1	14	1	64093685	1042
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000231292	protein_coding	alternative2	16	1	17509003	2491
ENSMUSG00000086438	antisense	Asb17os	ENSMUST00000156292	antisense		3	-1	153852424	496
ENSMUSG00000055116	protein_coding	Arntl	ENSMUST00000210238	protein_coding	principal1	7	1	113207557	2976
ENSMUSG00000090272	protein_coding	Mndal	ENSMUST00000188804	protein_coding	principal2	1	-1	173880305	2026
ENSMUSG00000034566	protein_coding	Atp5h	ENSMUST00000043931	protein_coding	principal1	11	-1	115419962	625
ENSMUSG00000113875	lincRNA	D230030E09Rik	ENSMUST00000222459	lincRNA		12	-1	118530193	884
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000232644	processed_transcript		16	1	17509033	722
ENSMUSG00000034566	protein_coding	Atp5h	ENSMUST00000073791	protein_coding	principal1	11	-1	115419962	659
ENSMUSG00000030739	protein_coding	Myh14	ENSMUST00000048102	protein_coding	alternative2	7	-1	44670843	6457
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000177483	protein_coding		15	1	79891694	826
ENSMUSG00000114034	processed_pseudogene	Gm9267	ENSMUST00000222831	processed_pseudogene		12	1	118602677	404
ENSMUSG00000095108	lincRNA	Gm17467	ENSMUST00000238243	lincRNA		X	-1	123704797	174
ENSMUSG00000090272	protein_coding	Mndal	ENSMUST00000189474	retained_intron		1	-1	173868760	1353
ENSMUSG00000095108	lincRNA	Gm17467	ENSMUST00000178553	lincRNA		X	-1	123704791	468
ENSMUSG00000091685	protein_coding	Gm17359	ENSMUST00000164216	protein_coding	principal2	3	1	79345376	778
ENSMUSG00000113546	processed_pseudogene	Gm18441	ENSMUST00000223539	processed_pseudogene		12	-1	118733055	617
ENSMUSG00000034566	protein_coding	Atp5h	ENSMUST00000137754	protein_coding		11	-1	115418741	468
ENSMUSG00000090272	protein_coding	Mndal	ENSMUST00000190071	nonsense_mediated_decay		1	-1	173873010	931
ENSMUSG00000055116	protein_coding	Arntl	ENSMUST00000211770	protein_coding		7	1	113234623	2464
ENSMUSG00000093796	processed_pseudogene	Rps12-ps23	ENSMUST00000179414	processed_pseudogene		X	1	123735811	402
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000176823	processed_transcript		15	1	79892058	600
ENSMUSG00000023186	protein_coding	Vwa5a	ENSMUST00000118144	protein_coding	principal1	9	1	38718272	3502
ENSMUSG00000030739	protein_coding	Myh14	ENSMUST00000208200	protein_coding		7	-1	44652568	4143
ENSMUSG00000052099	protein_coding	Prss51	ENSMUST00000165710	protein_coding		14	1	64093696	953
ENSMUSG00000090272	protein_coding	Mndal	ENSMUST00000190651	protein_coding		1	-1	173880111	762
ENSMUSG00000091685	protein_coding	Gm17359	ENSMUST00000199658	protein_coding	alternative2	3	1	79345379	1819
ENSMUSG00000055116	protein_coding	Arntl	ENSMUST00000209495	retained_intron		7	1	113239754	3995
ENSMUSG00000034566	protein_coding	Atp5h	ENSMUST00000138779	processed_transcript		11	-1	115419073	857
ENSMUSG00000113633	processed_pseudogene	Gm29689	ENSMUST00000221076	processed_pseudogene		12	-1	118758083	589
ENSMUSG00000034566	protein_coding	Atp5h	ENSMUST00000180072	protein_coding	principal1	11	-1	115418507	486
ENSMUSG00000055116	protein_coding	Arntl	ENSMUST00000211547	retained_intron		7	1	113305420	846
ENSMUSG00000023186	protein_coding	Vwa5a	ENSMUST00000129598	protein_coding		9	1	38719038	425
ENSMUSG00000052099	protein_coding	Prss51	ENSMUST00000170709	protein_coding		14	1	64093726	521
ENSMUSG00000090272	protein_coding	Mndal	ENSMUST00000189501	processed_transcript		1	-1	173880881	860
ENSMUSG00000109959	antisense	Gm45355	ENSMUST00000211342	antisense		7	-1	113295337	296
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000232242	protein_coding		16	1	17509212	463
ENSMUSG00000090272	protein_coding	Mndal	ENSMUST00000191500	processed_transcript		1	-1	173880187	367
ENSMUSG00000023186	protein_coding	Vwa5a	ENSMUST00000149376	retained_intron		9	1	38728484	356
ENSMUSG00000030739	protein_coding	Myh14	ENSMUST00000208044	processed_transcript		7	-1	44614125	1438
ENSMUSG00000090272	protein_coding	Mndal	ENSMUST00000187636	retained_intron		1	-1	173880208	667
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000232372	protein_coding		16	1	17511062	902
ENSMUSG00000023186	protein_coding	Vwa5a	ENSMUST00000152295	retained_intron		9	1	38734511	647
ENSMUSG00000030505	protein_coding	Prmt3	ENSMUST00000032715	protein_coding	principal1	7	1	49778346	2507
ENSMUSG00000023186	protein_coding	Vwa5a	ENSMUST00000130295	retained_intron		9	1	38735987	467
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000045295	protein_coding	principal1	2	1	24976033	4574
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000231326	retained_intron		16	1	17518066	742
ENSMUSG00000023186	protein_coding	Vwa5a	ENSMUST00000137972	nonsense_mediated_decay		9	1	38736185	775
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000231307	protein_coding		16	1	17520918	2214
ENSMUSG00000030505	protein_coding	Prmt3	ENSMUST00000152127	processed_transcript		7	1	49778437	504
ENSMUSG00000030739	protein_coding	Myh14	ENSMUST00000207775	protein_coding	alternative2	7	-1	44665503	6499
ENSMUSG00000092524	unprocessed_pseudogene	Olfr756-ps1	ENSMUST00000173450	unprocessed_pseudogene		17	-1	37286069	928
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000231684	retained_intron		16	1	17522643	774
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000232438	processed_transcript		16	1	17522688	595
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000183034	protein_coding	alternative2	1	1	33908225	23201
ENSMUSG00000030739	protein_coding	Myh14	ENSMUST00000209024	processed_transcript		7	-1	44632785	535
ENSMUSG00000001506	protein_coding	Col1a1	ENSMUST00000001547	protein_coding	principal1	11	1	94936224	5930
ENSMUSG00000030739	protein_coding	Myh14	ENSMUST00000208085	processed_transcript		7	-1	44630582	380
ENSMUSG00000029648	protein_coding	Flt1	ENSMUST00000031653	protein_coding	principal1	5	-1	147726011	6895
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000231230	retained_intron		16	1	17524060	595
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000187486	protein_coding		1	1	34005880	4539
ENSMUSG00000030739	protein_coding	Myh14	ENSMUST00000208131	protein_coding		7	-1	44669348	471
ENSMUSG00000022761	protein_coding	Lztr1	ENSMUST00000231746	retained_intron		16	1	17524833	906
ENSMUSG00000029648	protein_coding	Flt1	ENSMUST00000125272	processed_transcript		5	-1	147634418	395
ENSMUSG00000000708	protein_coding	Kat2b	ENSMUST00000163648	processed_transcript		17	1	53566861	322
ENSMUSG00000027187	protein_coding	Cat	ENSMUST00000028610	protein_coding	principal1	2	-1	103485160	2613
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000182697	protein_coding		1	1	34005882	2704
ENSMUSG00000028017	protein_coding	Egf	ENSMUST00000197079	protein_coding		3	-1	129725087	3346
ENSMUSG00000030739	protein_coding	Myh14	ENSMUST00000107900	protein_coding	alternative2	7	-1	44665503	6400
ENSMUSG00000029648	protein_coding	Flt1	ENSMUST00000142477	processed_transcript		5	-1	147615242	274
ENSMUSG00000028017	protein_coding	Egf	ENSMUST00000199615	protein_coding		3	-1	129725077	3211
ENSMUSG00000104710	antisense	Gm31243	ENSMUST00000197498	antisense		3	1	135904344	632
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000182314	protein_coding		1	1	34006126	2643
ENSMUSG00000033308	protein_coding	Dpyd	ENSMUST00000039177	protein_coding	principal1	3	1	118562129	4492
ENSMUSG00000028017	protein_coding	Egf	ENSMUST00000197250	retained_intron		3	-1	129681546	667
ENSMUSG00000029648	protein_coding	Flt1	ENSMUST00000110529	protein_coding		5	-1	147725988	6292
ENSMUSG00000104710	antisense	Gm31243	ENSMUST00000198354	antisense		3	1	135928232	628
ENSMUSG00000028017	protein_coding	Egf	ENSMUST00000199209	retained_intron		3	-1	129693082	478
ENSMUSG00000027187	protein_coding	Cat	ENSMUST00000111168	protein_coding		2	-1	103485125	779
ENSMUSG00000029648	protein_coding	Flt1	ENSMUST00000200895	retained_intron		5	-1	147646807	2030
ENSMUSG00000028017	protein_coding	Egf	ENSMUST00000199272	retained_intron		3	-1	129695277	2914
ENSMUSG00000105937	processed_pseudogene	Gm43602	ENSMUST00000196772	processed_pseudogene		3	-1	135963758	300
ENSMUSG00000030505	protein_coding	Prmt3	ENSMUST00000147401	nonsense_mediated_decay		7	1	49778437	1242
ENSMUSG00000025946	protein_coding	Pth2r	ENSMUST00000140190	protein_coding		1	1	65282056	631
ENSMUSG00000028017	protein_coding	Egf	ENSMUST00000197713	nonsense_mediated_decay		3	-1	129725086	4389
ENSMUSG00000030505	protein_coding	Prmt3	ENSMUST00000148996	processed_transcript		7	1	49778439	404
ENSMUSG00000055385	protein_coding	Rnf212	ENSMUST00000212176	nonsense_mediated_decay		5	-1	108774982	1136
ENSMUSG00000030505	protein_coding	Prmt3	ENSMUST00000145666	processed_transcript		7	1	49778544	600
ENSMUSG00000028017	protein_coding	Egf	ENSMUST00000198816	retained_intron		3	-1	129755316	1662
ENSMUSG00000033308	protein_coding	Dpyd	ENSMUST00000126254	retained_intron		3	1	118562130	2401
ENSMUSG00000030505	protein_coding	Prmt3	ENSMUST00000146052	processed_transcript		7	1	49779876	544
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000183331	retained_intron		1	1	34006180	2728
ENSMUSG00000029648	protein_coding	Flt1	ENSMUST00000031652	processed_transcript		5	-1	147725988	2049
ENSMUSG00000028017	protein_coding	Egf	ENSMUST00000198093	processed_transcript		3	-1	129755316	798
ENSMUSG00000030505	protein_coding	Prmt3	ENSMUST00000207216	retained_intron		7	1	49784201	2937
ENSMUSG00000033308	protein_coding	Dpyd	ENSMUST00000150950	retained_intron		3	1	118562177	1864
ENSMUSG00000033308	protein_coding	Dpyd	ENSMUST00000149101	protein_coding		3	1	118562180	531
ENSMUSG00000030505	protein_coding	Prmt3	ENSMUST00000130907	retained_intron		7	1	49798390	600
ENSMUSG00000033308	protein_coding	Dpyd	ENSMUST00000200178	retained_intron		3	1	118562186	967
ENSMUSG00000109154	TEC	Gm44822	ENSMUST00000208559	TEC		7	1	49814202	6389
ENSMUSG00000033308	protein_coding	Dpyd	ENSMUST00000129148	retained_intron		3	1	118811222	819
ENSMUSG00000106542	TEC	Gm43410	ENSMUST00000197510	TEC		3	1	118868244	2234
ENSMUSG00000031927	protein_coding	1700012B09Rik	ENSMUST00000191167	nonsense_mediated_decay		9	-1	14761659	319
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000097786	protein_coding	alternative2	1	1	34011813	17212
ENSMUSG00000028159	protein_coding	Dapp1	ENSMUST00000029806	protein_coding	principal1	3	-1	137981545	3083
ENSMUSG00000001506	protein_coding	Col1a1	ENSMUST00000139974	processed_transcript		11	1	94937686	337
ENSMUSG00000055385	protein_coding	Rnf212	ENSMUST00000196652	protein_coding		5	-1	108750955	853
ENSMUSG00000001506	protein_coding	Col1a1	ENSMUST00000148593	retained_intron		11	1	94939012	493
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000228868	nonsense_mediated_decay		15	1	76477422	2002
ENSMUSG00000001506	protein_coding	Col1a1	ENSMUST00000148046	retained_intron		11	1	94945368	363
ENSMUSG00000055385	protein_coding	Rnf212	ENSMUST00000212212	protein_coding	principal1	5	-1	108774982	924
ENSMUSG00000055385	protein_coding	Rnf212	ENSMUST00000197384	protein_coding		5	-1	108750918	899
ENSMUSG00000028159	protein_coding	Dapp1	ENSMUST00000136613	protein_coding		3	-1	137981536	2950
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000228757	nonsense_mediated_decay		15	1	76477422	2699
ENSMUSG00000114755	protein_coding	Galr3	ENSMUST00000058004	protein_coding	principal1	15	1	79041885	1245
ENSMUSG00000055385	protein_coding	Rnf212	ENSMUST00000200159	protein_coding		5	-1	108774953	773
ENSMUSG00000055385	protein_coding	Rnf212	ENSMUST00000068946	protein_coding		5	-1	108749448	288
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000097785	protein_coding	principal4	1	1	34011825	23251
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000114128	protein_coding	alternative2	X	1	74424604	1867
ENSMUSG00000101762	antisense	1700047L14Rik	ENSMUST00000189659	antisense		5	1	108763842	511
ENSMUSG00000025946	protein_coding	Pth2r	ENSMUST00000027083	protein_coding	principal1	1	1	65311257	2414
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000239001	protein_coding		1	1	34077227	537
ENSMUSG00000000792	protein_coding	Slc5a5	ENSMUST00000000809	protein_coding	principal1	8	-1	70892757	2928
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000107876	protein_coding	principal1	7	1	44857139	1770
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000137913	nonsense_mediated_decay		2	1	24976073	4616
ENSMUSG00000113169	processed_pseudogene	Gm6171	ENSMUST00000220760	processed_pseudogene		12	-1	118793832	645
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000182410	retained_intron		1	1	34089292	2027
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000183006	protein_coding		1	1	34121250	1539
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000154968	protein_coding		7	1	44857151	213
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000153618	protein_coding		2	1	24976088	630
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000152777	protein_coding		2	1	24976089	812
ENSMUSG00000087059	processed_transcript	Gm12339	ENSMUST00000127424	antisense		11	1	75794768	728
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000139031	processed_transcript		2	1	24976101	378
ENSMUSG00000087059	processed_transcript	Gm12339	ENSMUST00000139361	processed_transcript		11	1	75795220	525
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000123926	nonsense_mediated_decay		9	-1	107605521	3433
ENSMUSG00000028159	protein_coding	Dapp1	ENSMUST00000184222	processed_transcript		3	-1	137955867	962
ENSMUSG00000031927	protein_coding	1700012B09Rik	ENSMUST00000188350	nonsense_mediated_decay		9	-1	14771013	641
ENSMUSG00000031927	protein_coding	1700012B09Rik	ENSMUST00000186706	nonsense_mediated_decay		9	-1	14761615	206
ENSMUSG00000028159	protein_coding	Dapp1	ENSMUST00000124827	processed_transcript		3	-1	137954713	782
ENSMUSG00000048562	protein_coding	Sp8	ENSMUST00000063918	protein_coding	principal1	12	1	118846329	4478
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000183302	protein_coding		1	1	34160330	8788
ENSMUSG00000031927	protein_coding	1700012B09Rik	ENSMUST00000191047	protein_coding	alternative2	9	-1	14771013	654
ENSMUSG00000028159	protein_coding	Dapp1	ENSMUST00000154716	processed_transcript		3	-1	137981530	429
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000185897	protein_coding		1	1	34160330	8961
ENSMUSG00000048562	protein_coding	Sp8	ENSMUST00000223305	protein_coding		12	1	118847586	726
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000139643	retained_intron		2	1	24976148	2990
ENSMUSG00000028159	protein_coding	Dapp1	ENSMUST00000200596	processed_transcript		3	-1	137954713	439
ENSMUSG00000106840	TEC	Gm42790	ENSMUST00000201268	TEC		5	-1	129876947	969
ENSMUSG00000028159	protein_coding	Dapp1	ENSMUST00000199541	retained_intron		3	-1	137981536	832
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000003044	protein_coding	principal1	7	1	44857159	2184
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000142139	processed_transcript		2	1	24982115	651
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000114133	protein_coding	alternative2	X	1	74424612	6994
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000145508	retained_intron		2	1	24995665	756
ENSMUSG00000024646	protein_coding	Cyb5a	ENSMUST00000235725	processed_transcript		18	1	84838704	1182
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000146153	protein_coding		2	1	24996157	561
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000185269	protein_coding		1	1	34160330	16340
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000132082	retained_intron		2	1	25039506	2018
ENSMUSG00000031927	protein_coding	1700012B09Rik	ENSMUST00000060330	protein_coding	principal2	9	-1	14771030	688
ENSMUSG00000023403	protein_coding	Stk31	ENSMUST00000024171	protein_coding	principal2	6	1	49395604	3237
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000182335	retained_intron		1	1	34161924	3478
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000189952	retained_intron		1	1	34178906	4342
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000154359	retained_intron		2	1	25051352	457
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000114129	protein_coding	principal3	X	1	74424633	2222
ENSMUSG00000023403	protein_coding	Stk31	ENSMUST00000163954	protein_coding	alternative2	6	1	49395635	2988
ENSMUSG00000023403	protein_coding	Stk31	ENSMUST00000172459	protein_coding	alternative2	6	1	49395635	2922
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000155601	nonsense_mediated_decay		2	1	25051666	715
ENSMUSG00000042182	protein_coding	Bend6	ENSMUST00000115161	protein_coding		1	-1	33907768	2231
ENSMUSG00000040966	protein_coding	Slc22a2	ENSMUST00000046959	protein_coding	principal1	17	1	12584132	2195
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000132749	protein_coding		X	1	74424638	278
ENSMUSG00000023403	protein_coding	Stk31	ENSMUST00000167846	protein_coding		6	1	49438564	1251
ENSMUSG00000071719	protein_coding	Tmem28	ENSMUST00000096363	protein_coding	principal1	X	1	99821021	3909
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000128517	retained_intron		2	1	25051721	493
ENSMUSG00000040966	protein_coding	Slc22a2	ENSMUST00000233066	protein_coding		17	1	12584193	1977
ENSMUSG00000090624	processed_pseudogene	Gm17060	ENSMUST00000172394	processed_pseudogene		6	-1	49424884	824
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000138536	retained_intron		2	1	25051908	810
ENSMUSG00000095187	protein_coding	Olfr1381	ENSMUST00000213256	protein_coding	principal1	11	1	49543449	4954
ENSMUSG00000036833	protein_coding	Pnpla7	ENSMUST00000141584	retained_intron		2	1	25053154	530
ENSMUSG00000089652	lincRNA	Gm16025	ENSMUST00000161923	lincRNA		1	1	85326729	2425
ENSMUSG00000083796	processed_pseudogene	Gm13369	ENSMUST00000119442	processed_pseudogene		2	-1	24994343	987
ENSMUSG00000089652	lincRNA	Gm16025	ENSMUST00000161282	lincRNA		1	1	85326738	184
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000194192	protein_coding		1	1	34236596	6039
ENSMUSG00000095187	protein_coding	Olfr1381	ENSMUST00000167248	protein_coding	principal1	11	1	49551749	936
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000182018	protein_coding		1	1	34257836	5729
ENSMUSG00000030769	protein_coding	Slc5a11	ENSMUST00000131933	protein_coding		7	1	123214780	1648
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000185736	retained_intron		1	1	34270570	1394
ENSMUSG00000091199	processed_transcript	Gm2619	ENSMUST00000162276	processed_transcript		1	-1	85327285	392
ENSMUSG00000027380	protein_coding	Acoxl	ENSMUST00000028859	protein_coding	principal1	2	1	127854628	2842
ENSMUSG00000101537	antisense	Gm29571	ENSMUST00000191547	antisense		10	1	25536386	1909
ENSMUSG00000074243	processed_pseudogene	Gm10651	ENSMUST00000118212	processed_pseudogene		7	-1	27949763	609
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000183100	protein_coding		1	1	34293455	786
ENSMUSG00000112101	processed_pseudogene	Gm47924	ENSMUST00000219989	processed_pseudogene		10	-1	25628874	1302
ENSMUSG00000030769	protein_coding	Slc5a11	ENSMUST00000140721	processed_transcript		7	1	123214811	459
ENSMUSG00000089937	unprocessed_pseudogene	Gm7281	ENSMUST00000160010	unprocessed_pseudogene		1	-1	85342086	543
ENSMUSG00000020848	protein_coding	Doc2b	ENSMUST00000021209	protein_coding	principal1	11	-1	75796049	4361
ENSMUSG00000042182	protein_coding	Bend6	ENSMUST00000129464	protein_coding		1	-1	33907791	1750
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000182507	protein_coding		1	1	34294446	776
ENSMUSG00000118591	protein_coding	AC147806.1	ENSMUST00000239361	protein_coding	principal1	1	-1	85485142	891
ENSMUSG00000112630	lincRNA	Gm36908	ENSMUST00000218080	lincRNA		10	-1	25621563	1662
ENSMUSG00000061175	protein_coding	Fnip2	ENSMUST00000133154	protein_coding	alternative2	3	-1	79567796	7299
ENSMUSG00000107645	protein_coding	Olfr1380	ENSMUST00000215360	protein_coding	principal1	11	1	49556878	2498
ENSMUSG00000026131	protein_coding	Dst	ENSMUST00000115104	protein_coding	alternative2	1	1	34011825	23279
ENSMUSG00000027380	protein_coding	Acoxl	ENSMUST00000126410	processed_transcript		2	1	127838876	531
ENSMUSG00000112803	lincRNA	Gm36543	ENSMUST00000217933	lincRNA		10	-1	25707943	542
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000138564	protein_coding		X	1	74427902	727
ENSMUSG00000107645	protein_coding	Olfr1380	ENSMUST00000204300	protein_coding	principal1	11	1	49563923	938
ENSMUSG00000103596	TEC	Gm37354	ENSMUST00000193333	TEC		1	1	33922455	2384
ENSMUSG00000027380	protein_coding	Acoxl	ENSMUST00000110344	protein_coding		2	1	127909058	1573
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000149525	protein_coding		X	1	74429281	872
ENSMUSG00000099382	processed_pseudogene	Gm28631	ENSMUST00000190740	processed_pseudogene		1	-1	33963685	334
ENSMUSG00000081791	processed_pseudogene	Gm12190	ENSMUST00000120001	processed_pseudogene		11	-1	49595925	187
ENSMUSG00000061175	protein_coding	Fnip2	ENSMUST00000149475	retained_intron		3	-1	79466205	3629
ENSMUSG00000112269	processed_pseudogene	Gm6906	ENSMUST00000218014	processed_pseudogene		10	1	25836687	569
ENSMUSG00000030769	protein_coding	Slc5a11	ENSMUST00000033035	protein_coding	principal1	7	1	123214813	2396
ENSMUSG00000112691	processed_pseudogene	Gm8681	ENSMUST00000219115	processed_pseudogene		10	-1	25833696	618
ENSMUSG00000062949	protein_coding	Atp11c	ENSMUST00000154051	protein_coding		X	-1	60592698	6039
ENSMUSG00000112491	processed_pseudogene	Gm19801	ENSMUST00000218231	processed_pseudogene		10	1	25831134	1882
ENSMUSG00000061175	protein_coding	Fnip2	ENSMUST00000076136	protein_coding	principal2	3	-1	79567682	3775
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000114873	protein_coding	principal1	17	1	27655509	1857
ENSMUSG00000042182	protein_coding	Bend6	ENSMUST00000062289	protein_coding	principal1	1	-1	33907816	2487
ENSMUSG00000078439	protein_coding	Smim24	ENSMUST00000105322	protein_coding	principal1	10	1	81393051	901
ENSMUSG00000112444	lincRNA	4930401C15Rik	ENSMUST00000218300	lincRNA		10	-1	25837437	865
ENSMUSG00000016253	protein_coding	Nelfcd	ENSMUST00000109075	protein_coding	principal1	2	1	174415804	2279
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000114127	protein_coding	alternative2	X	1	74429671	3332
ENSMUSG00000038709	protein_coding	Txndc8	ENSMUST00000154540	processed_transcript		4	-1	58009025	585
ENSMUSG00000030769	protein_coding	Slc5a11	ENSMUST00000131461	protein_coding		7	1	123228884	440
ENSMUSG00000023829	protein_coding	Slc22a1	ENSMUST00000233691	nonsense_mediated_decay		17	-1	12675696	1753
ENSMUSG00000006378	protein_coding	Gcat	ENSMUST00000006544	protein_coding	principal1	15	1	79030874	2370
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000064407	protein_coding	principal3	X	1	74429704	4530
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000048134	protein_coding	alternative2	3	-1	63851039	6259
ENSMUSG00000030769	protein_coding	Slc5a11	ENSMUST00000127655	protein_coding		7	1	123228884	704
ENSMUSG00000078439	protein_coding	Smim24	ENSMUST00000118206	protein_coding		10	1	81393627	949
ENSMUSG00000030769	protein_coding	Slc5a11	ENSMUST00000131209	protein_coding		7	1	123240323	215
ENSMUSG00000006378	protein_coding	Gcat	ENSMUST00000229276	protein_coding		15	1	79033498	679
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000139036	retained_intron		X	1	74429722	651
ENSMUSG00000030769	protein_coding	Slc5a11	ENSMUST00000206180	processed_transcript		7	1	123265189	242
ENSMUSG00000042182	protein_coding	Bend6	ENSMUST00000195350	processed_transcript		1	-1	33883480	349
ENSMUSG00000030769	protein_coding	Slc5a11	ENSMUST00000167299	protein_coding	principal1	7	1	123235620	2022
ENSMUSG00000078439	protein_coding	Smim24	ENSMUST00000129083	processed_transcript		10	1	81393654	666
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000156707	protein_coding		X	1	74429763	718
ENSMUSG00000061175	protein_coding	Fnip2	ENSMUST00000154645	retained_intron		3	-1	79500522	2737
ENSMUSG00000061175	protein_coding	Fnip2	ENSMUST00000239298	protein_coding		3	-1	79531876	2189
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000159374	retained_intron		3	-1	63702354	3835
ENSMUSG00000042182	protein_coding	Bend6	ENSMUST00000126724	retained_intron		1	-1	33883842	1580
ENSMUSG00000062949	protein_coding	Atp11c	ENSMUST00000133295	processed_transcript		X	-1	60266830	1154
ENSMUSG00000016253	protein_coding	Nelfcd	ENSMUST00000016397	protein_coding		2	1	174415851	2280
ENSMUSG00000100503	unprocessed_pseudogene	Gm28927	ENSMUST00000191528	unprocessed_pseudogene		1	-1	65421121	272
ENSMUSG00000042182	protein_coding	Bend6	ENSMUST00000139700	processed_transcript		1	-1	33883490	382
ENSMUSG00000009418	protein_coding	Nav1	ENSMUST00000067414	protein_coding	principal2	1	-1	135585705	13117
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000143784	processed_transcript		X	1	74438887	611
ENSMUSG00000104416	TEC	Gm37067	ENSMUST00000195730	TEC		1	-1	33891117	1628
ENSMUSG00000061175	protein_coding	Fnip2	ENSMUST00000130613	processed_transcript		3	-1	79515252	872
ENSMUSG00000113849	TEC	Gm47346	ENSMUST00000221302	TEC		12	-1	98585976	3613
ENSMUSG00000061175	protein_coding	Fnip2	ENSMUST00000139171	retained_intron		3	-1	79567679	507
ENSMUSG00000089746	sense_intronic	Gm3513	ENSMUST00000161319	sense_intronic		3	-1	79552193	637
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000045896	protein_coding	principal1	17	1	27655548	4176
ENSMUSG00000009418	protein_coding	Nav1	ENSMUST00000190298	protein_coding	alternative2	1	-1	135688105	9353
ENSMUSG00000016253	protein_coding	Nelfcd	ENSMUST00000129716	processed_transcript		2	1	174415880	600
ENSMUSG00000062949	protein_coding	Atp11c	ENSMUST00000138569	processed_transcript		X	-1	60592698	4475
ENSMUSG00000024646	protein_coding	Cyb5a	ENSMUST00000160180	protein_coding	principal1	18	1	84851338	833
ENSMUSG00000021975	protein_coding	Ints9	ENSMUST00000043914	protein_coding	principal1	14	1	64950045	2674
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000145850	retained_intron		7	1	44857167	1975
ENSMUSG00000009418	protein_coding	Nav1	ENSMUST00000187311	retained_intron		1	-1	135453907	908
ENSMUSG00000009418	protein_coding	Nav1	ENSMUST00000189252	protein_coding		1	-1	135467673	668
ENSMUSG00000106825	TEC	2510016D11Rik	ENSMUST00000201971	TEC		5	-1	120553039	985
ENSMUSG00000009418	protein_coding	Nav1	ENSMUST00000190735	retained_intron		1	-1	135461189	3408
ENSMUSG00000016253	protein_coding	Nelfcd	ENSMUST00000143683	retained_intron		2	1	174423392	618
ENSMUSG00000024646	protein_coding	Cyb5a	ENSMUST00000025549	nonsense_mediated_decay		18	1	84851377	534
ENSMUSG00000016253	protein_coding	Nelfcd	ENSMUST00000139390	retained_intron		2	1	174424680	610
ENSMUSG00000116378	protein_coding	Gcat	ENSMUST00000171999	protein_coding	principal1	15	1	79030901	1736
ENSMUSG00000016253	protein_coding	Nelfcd	ENSMUST00000137986	retained_intron		2	1	174426362	765
ENSMUSG00000062949	protein_coding	Atp11c	ENSMUST00000033480	protein_coding	alternative2	X	-1	60403981	5939
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000004330	protein_coding	alternative2	X	1	74424612	6918
ENSMUSG00000024646	protein_coding	Cyb5a	ENSMUST00000159846	retained_intron		18	1	84851407	773
ENSMUSG00000024646	protein_coding	Cyb5a	ENSMUST00000236742	nonsense_mediated_decay		18	1	84851414	1001
ENSMUSG00000000708	protein_coding	Kat2b	ENSMUST00000000724	protein_coding	principal1	17	1	53566971	4653
ENSMUSG00000024646	protein_coding	Cyb5a	ENSMUST00000163083	protein_coding		18	1	84851879	676
ENSMUSG00000062949	protein_coding	Atp11c	ENSMUST00000101527	protein_coding	principal4	X	-1	60403981	6044
ENSMUSG00000024646	protein_coding	Cyb5a	ENSMUST00000235254	processed_transcript		18	1	84854969	1170
ENSMUSG00000000708	protein_coding	Kat2b	ENSMUST00000164390	protein_coding		17	1	53584126	673
ENSMUSG00000037922	protein_coding	Bank1	ENSMUST00000196159	protein_coding	alternative2	3	-1	136326046	2849
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000164101	protein_coding	alternative2	X	1	74393291	6788
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000139003	nonsense_mediated_decay		7	1	44857173	990
ENSMUSG00000000708	protein_coding	Kat2b	ENSMUST00000166525	protein_coding		17	1	53644697	439
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000022176	protein_coding	principal1	13	-1	96670936	4425
ENSMUSG00000021975	protein_coding	Ints9	ENSMUST00000224593	retained_intron		14	1	64950302	3476
ENSMUSG00000024646	protein_coding	Cyb5a	ENSMUST00000159837	retained_intron		18	1	84877601	623
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000124168	nonsense_mediated_decay		7	1	44857340	933
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000114130	protein_coding	alternative2	X	1	74429315	6736
ENSMUSG00000089744	antisense	Gm16146	ENSMUST00000236717	antisense		18	-1	84859586	520
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000159982	retained_intron		3	-1	63740865	5099
ENSMUSG00000004221	protein_coding	Ikbkg	ENSMUST00000180230	protein_coding	principal3	X	1	74393291	6785
ENSMUSG00000023829	protein_coding	Slc22a1	ENSMUST00000024596	protein_coding	principal1	17	-1	12675829	1985
ENSMUSG00000060260	protein_coding	Pwwp2b	ENSMUST00000093993	protein_coding		7	1	139248482	3057
ENSMUSG00000089744	antisense	Gm16146	ENSMUST00000160306	antisense		18	-1	84859547	439
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000168855	nonsense_mediated_decay		13	-1	96666763	1177
ENSMUSG00000000708	protein_coding	Kat2b	ENSMUST00000167092	retained_intron		17	1	53659238	450
ENSMUSG00000079583	protein_coding	Gm7073	ENSMUST00000190178	protein_coding	principal1	X	-1	60456195	1419
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000098478	protein_coding		7	1	44857342	1550
ENSMUSG00000016552	protein_coding	Foxred2	ENSMUST00000016696	protein_coding	principal1	15	-1	77956722	4793
ENSMUSG00000021975	protein_coding	Ints9	ENSMUST00000225790	retained_intron		14	1	64950313	3074
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000169945	protein_coding		13	-1	96652803	633
ENSMUSG00000037922	protein_coding	Bank1	ENSMUST00000041577	protein_coding	principal3	3	-1	136326066	3268
ENSMUSG00000000708	protein_coding	Kat2b	ENSMUST00000172160	retained_intron		17	1	53659311	402
ENSMUSG00000079583	protein_coding	Gm7073	ENSMUST00000114687	protein_coding	principal1	X	-1	60452477	1374
ENSMUSG00000023829	protein_coding	Slc22a1	ENSMUST00000233601	processed_transcript		17	-1	12652708	447
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000170287	protein_coding		13	-1	96666710	2981
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000033939	protein_coding	principal1	8	-1	22706578	3580
ENSMUSG00000102608	lincRNA	Gm37267	ENSMUST00000194222	lincRNA		1	-1	180519727	681
ENSMUSG00000016552	protein_coding	Foxred2	ENSMUST00000140096	retained_intron		15	-1	77945888	3177
ENSMUSG00000079583	protein_coding	Gm7073	ENSMUST00000166562	protein_coding	principal1	X	-1	60539249	1369
ENSMUSG00000021975	protein_coding	Ints9	ENSMUST00000239450	protein_coding		14	1	64950045	2677
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000169202	protein_coding		13	-1	96656667	656
ENSMUSG00000117158	processed_pseudogene	Gm49866	ENSMUST00000233030	processed_pseudogene		17	-1	65560776	392
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000123015	nonsense_mediated_decay		7	1	44857348	1573
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000155050	nonsense_mediated_decay		7	1	44857379	1674
ENSMUSG00000037922	protein_coding	Bank1	ENSMUST00000198206	protein_coding	alternative2	3	-1	136326025	2538
ENSMUSG00000000708	protein_coding	Kat2b	ENSMUST00000171072	nonsense_mediated_decay		17	1	53659395	455
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000201882	nonsense_mediated_decay		7	1	44857394	1497
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000208666	protein_coding		7	1	44858496	765
ENSMUSG00000016552	protein_coding	Foxred2	ENSMUST00000117725	protein_coding	principal1	15	-1	77956675	4347
ENSMUSG00000096517	processed_pseudogene	Gm6919	ENSMUST00000180049	processed_pseudogene		17	-1	53598663	483
ENSMUSG00000009418	protein_coding	Nav1	ENSMUST00000189362	retained_intron		1	-1	135510384	3453
ENSMUSG00000037922	protein_coding	Bank1	ENSMUST00000196131	retained_intron		3	-1	136054716	536
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000152747	retained_intron		7	1	44860423	860
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000163201	retained_intron		13	-1	96670875	2228
ENSMUSG00000009418	protein_coding	Nav1	ENSMUST00000190130	processed_transcript		1	-1	135510451	2622
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000232437	protein_coding	principal1	17	1	27655588	4566
ENSMUSG00000105296	lincRNA	Gm19708	ENSMUST00000199386	lincRNA		3	1	138000939	543
ENSMUSG00000016552	protein_coding	Foxred2	ENSMUST00000129045	retained_intron		15	-1	77956683	1877
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000176770	protein_coding		9	-1	105521147	2781
ENSMUSG00000038709	protein_coding	Txndc8	ENSMUST00000102897	protein_coding	alternative2	4	-1	58009124	620
ENSMUSG00000009418	protein_coding	Nav1	ENSMUST00000112103	retained_intron		1	-1	135688105	1645
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000169196	protein_coding		13	-1	96670823	1031
ENSMUSG00000060260	protein_coding	Pwwp2b	ENSMUST00000172136	protein_coding	principal1	7	1	139248487	2543
ENSMUSG00000037922	protein_coding	Bank1	ENSMUST00000199902	retained_intron		3	-1	136056103	629
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000175714	protein_coding	alternative2	15	1	79892403	1953
ENSMUSG00000016256	protein_coding	Ctsz	ENSMUST00000016400	protein_coding	principal1	2	-1	174439039	1441
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000126860	retained_intron		7	1	44860545	672
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000208385	nonsense_mediated_decay		7	1	44860868	624
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000231669	protein_coding	principal1	17	1	27685181	4209
ENSMUSG00000117806	processed_pseudogene	Gm50325	ENSMUST00000237010	processed_pseudogene		19	1	51631549	1079
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000172440	retained_intron		13	-1	96666587	587
ENSMUSG00000037922	protein_coding	Bank1	ENSMUST00000198034	retained_intron		3	-1	136247755	4235
ENSMUSG00000067835	antisense	Gm14661	ENSMUST00000152669	antisense		X	1	60557728	2051
ENSMUSG00000039110	protein_coding	Mycbpap	ENSMUST00000139432	processed_transcript		11	-1	94503571	396
ENSMUSG00000060260	protein_coding	Pwwp2b	ENSMUST00000209721	retained_intron		7	1	139265799	4105
ENSMUSG00000009418	protein_coding	Nav1	ENSMUST00000040599	protein_coding	alternative2	1	-1	135585355	12767
ENSMUSG00000105244	processed_pseudogene	Gm5281	ENSMUST00000197542	processed_pseudogene		3	-1	136051688	2134
ENSMUSG00000086562	processed_pseudogene	Gm14651	ENSMUST00000147192	processed_pseudogene		X	-1	60615251	442
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000202646	non_stop_decay		7	1	44861375	444
ENSMUSG00000038709	protein_coding	Txndc8	ENSMUST00000139256	protein_coding		4	-1	58000310	268
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000169966	protein_coding		13	-1	96669654	800
ENSMUSG00000118158	processed_pseudogene	Gm50326	ENSMUST00000236266	processed_pseudogene		19	-1	51674650	263
ENSMUSG00000038709	protein_coding	Txndc8	ENSMUST00000239406	protein_coding	principal2	4	-1	58009124	618
ENSMUSG00000083463	processed_pseudogene	Gm4909	ENSMUST00000118749	processed_pseudogene		X	-1	60707063	794
ENSMUSG00000118430	unprocessed_pseudogene	Cldn34c3	ENSMUST00000238631	unprocessed_pseudogene		X	1	123793665	740
ENSMUSG00000081729	processed_pseudogene	Hspa9-ps1	ENSMUST00000119602	processed_pseudogene		X	-1	60578878	1933
ENSMUSG00000110115	lincRNA	Gm32486	ENSMUST00000209810	lincRNA		7	-1	139296865	3816
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000171537	protein_coding		13	-1	96670482	375
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000097360	protein_coding	principal1	17	1	27685197	1800
ENSMUSG00000045744	protein_coding	Bricd5	ENSMUST00000054946	protein_coding	principal2	17	1	24473884	997
ENSMUSG00000021670	protein_coding	Hmgcr	ENSMUST00000168374	retained_intron		13	-1	96670848	429
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000200892	protein_coding		7	1	44861514	454
ENSMUSG00000002963	protein_coding	Pnkp	ENSMUST00000144669	retained_intron		7	1	44861697	455
ENSMUSG00000095521	lincRNA	Astx5	ENSMUST00000179723	lincRNA		X	-1	123893407	1150
ENSMUSG00000078213	protein_coding	Btbd35f4	ENSMUST00000105011	protein_coding	principal1	X	1	4800496	1491
ENSMUSG00000045744	protein_coding	Bricd5	ENSMUST00000238986	protein_coding	alternative2	17	1	24473901	849
ENSMUSG00000092587	unprocessed_pseudogene	Vmn2r-ps85	ENSMUST00000174022	unprocessed_pseudogene		7	1	86181204	940
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000155259	processed_transcript		17	1	27685227	552
ENSMUSG00000094015	processed_pseudogene	Rps12-ps20	ENSMUST00000121168	processed_pseudogene		X	1	123957274	402
ENSMUSG00000105872	unprocessed_pseudogene	Gm9515	ENSMUST00000200276	unprocessed_pseudogene		3	-1	107911249	647
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000231236	protein_coding		17	1	27685239	672
ENSMUSG00000045744	protein_coding	Bricd5	ENSMUST00000164508	protein_coding	principal2	17	1	24473967	701
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000231350	processed_transcript		17	1	27704457	1368
ENSMUSG00000031700	protein_coding	Gpt2	ENSMUST00000034136	protein_coding	principal1	8	1	85492576	3639
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000176868	nonsense_mediated_decay		15	1	79892411	699
ENSMUSG00000082720	processed_pseudogene	Gm12489	ENSMUST00000119364	processed_pseudogene		3	1	107919662	148
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000114872	protein_coding		17	1	27705649	972
ENSMUSG00000086481	lincRNA	Gm11707	ENSMUST00000150366	lincRNA		11	-1	106973090	490
ENSMUSG00000025538	protein_coding	Sumf2	ENSMUST00000171300	protein_coding	principal1	5	1	129846986	2264
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000232225	retained_intron		17	1	27706480	697
ENSMUSG00000094693	processed_pseudogene	Gm4726	ENSMUST00000135604	processed_pseudogene		X	-1	4839942	736
ENSMUSG00000026623	protein_coding	Lpgat1	ENSMUST00000133076	protein_coding		1	1	191717834	586
ENSMUSG00000040276	protein_coding	Pacsin1	ENSMUST00000231854	retained_intron		17	1	27706534	1786
ENSMUSG00000118483	protein_coding	Gm5945	ENSMUST00000238503	protein_coding	principal1	X	1	124015997	857
ENSMUSG00000036959	protein_coding	Bcorl1	ENSMUST00000136348	protein_coding	principal1	X	1	48341358	7446
ENSMUSG00000102948	processed_pseudogene	Gm6101	ENSMUST00000195384	processed_pseudogene		1	-1	4260519	1867
ENSMUSG00000025538	protein_coding	Sumf2	ENSMUST00000201874	protein_coding		5	1	129847011	406
ENSMUSG00000087387	antisense	Gm15420	ENSMUST00000133274	antisense		17	1	27635343	388
ENSMUSG00000117216	antisense	Gm49801	ENSMUST00000233056	antisense		17	1	27907803	547
ENSMUSG00000117130	sense_intronic	Gm49802	ENSMUST00000232846	sense_intronic		17	1	27982392	767
ENSMUSG00000087075	protein_coding	Lbhd2	ENSMUST00000150384	protein_coding	principal1	12	1	111406809	670
ENSMUSG00000036959	protein_coding	Bcorl1	ENSMUST00000156703	processed_transcript		X	1	48342061	1160
ENSMUSG00000020673	protein_coding	Tpo	ENSMUST00000021005	protein_coding	principal1	12	-1	30132624	3299
ENSMUSG00000036959	protein_coding	Bcorl1	ENSMUST00000037596	protein_coding	principal1	X	1	48343770	7360
ENSMUSG00000021977	protein_coding	1700129C05Rik	ENSMUST00000022548	protein_coding	principal2	14	-1	59142893	1067
ENSMUSG00000027611	protein_coding	Procr	ENSMUST00000029140	protein_coding	principal1	2	1	155751117	1597
ENSMUSG00000092419	unprocessed_pseudogene	Vmn2r-ps86	ENSMUST00000174812	unprocessed_pseudogene		7	-1	86186596	871
ENSMUSG00000020673	protein_coding	Tpo	ENSMUST00000140875	retained_intron		12	-1	30094999	851
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000135326	nonsense_mediated_decay		8	-1	22706534	3705
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000177006	nonsense_mediated_decay		15	1	79892442	1217
ENSMUSG00000036959	protein_coding	Bcorl1	ENSMUST00000156042	nonsense_mediated_decay		X	1	48361537	738
ENSMUSG00000025900	protein_coding	Rp1	ENSMUST00000208660	protein_coding	principal1	1	-1	4409241	4170
ENSMUSG00000031700	protein_coding	Gpt2	ENSMUST00000132932	nonsense_mediated_decay		8	1	85492607	3229
ENSMUSG00000020673	protein_coding	Tpo	ENSMUST00000155263	protein_coding		12	-1	30131899	664
ENSMUSG00000027611	protein_coding	Procr	ENSMUST00000143493	processed_transcript		2	1	155751344	1608
ENSMUSG00000036959	protein_coding	Bcorl1	ENSMUST00000114972	protein_coding		X	1	48361620	5591
ENSMUSG00000031700	protein_coding	Gpt2	ENSMUST00000143659	processed_transcript		8	1	85492609	484
ENSMUSG00000027611	protein_coding	Procr	ENSMUST00000155095	retained_intron		2	1	155751150	578
ENSMUSG00000036959	protein_coding	Bcorl1	ENSMUST00000142160	protein_coding		X	1	48369268	2236
ENSMUSG00000060988	protein_coding	Galnt13	ENSMUST00000112636	protein_coding	principal1	2	1	54436317	7530
ENSMUSG00000021977	protein_coding	1700129C05Rik	ENSMUST00000162674	protein_coding	alternative2	14	-1	59142893	566
ENSMUSG00000031700	protein_coding	Gpt2	ENSMUST00000140189	retained_intron		8	1	85515977	729
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000125314	nonsense_mediated_decay		8	-1	22706540	3536
ENSMUSG00000085472	antisense	Gm15691	ENSMUST00000138626	antisense		12	1	30059657	849
ENSMUSG00000021977	protein_coding	1700129C05Rik	ENSMUST00000159858	protein_coding	alternative2	14	-1	59142893	784
ENSMUSG00000027611	protein_coding	Procr	ENSMUST00000132608	protein_coding		2	1	155751123	504
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000175752	protein_coding	alternative2	15	1	79892448	1977
ENSMUSG00000021977	protein_coding	1700129C05Rik	ENSMUST00000162271	protein_coding	alternative2	14	-1	59142893	325
ENSMUSG00000025900	protein_coding	Rp1	ENSMUST00000208793	retained_intron		1	-1	4409241	3047
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000175849	retained_intron		15	1	79892449	1693
ENSMUSG00000092077	protein_coding	Olfr101	ENSMUST00000215392	protein_coding	principal1	17	-1	37302632	2899
ENSMUSG00000031700	protein_coding	Gpt2	ENSMUST00000143846	processed_transcript		8	1	85519409	628
ENSMUSG00000092077	protein_coding	Olfr101	ENSMUST00000214376	protein_coding	principal1	17	-1	37304313	2989
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000176325	protein_coding	alternative2	15	1	79892449	2765
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000177098	nonsense_mediated_decay		15	1	79892455	2225
ENSMUSG00000113334	lincRNA	D030007L05Rik	ENSMUST00000222964	lincRNA		13	1	70650144	1871
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000063401	protein_coding		8	-1	22706589	3977
ENSMUSG00000054457	processed_transcript	9430021M05Rik	ENSMUST00000145985	processed_transcript		2	1	162661163	1201
ENSMUSG00000025538	protein_coding	Sumf2	ENSMUST00000201029	processed_transcript		5	1	129847020	375
ENSMUSG00000092077	protein_coding	Olfr101	ENSMUST00000058046	protein_coding	principal1	17	-1	37300484	1039
ENSMUSG00000060988	protein_coding	Galnt13	ENSMUST00000112635	protein_coding	principal1	2	1	54436387	7531
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000023054	protein_coding		15	1	79895023	1842
ENSMUSG00000087536	lincRNA	Gm14246	ENSMUST00000155173	lincRNA		2	1	162679455	680
ENSMUSG00000060988	protein_coding	Galnt13	ENSMUST00000112634	protein_coding		2	1	54436387	7639
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000132279	protein_coding		8	-1	22661482	636
ENSMUSG00000113909	lincRNA	Gm36377	ENSMUST00000220833	lincRNA		13	-1	70655787	757
ENSMUSG00000082296	processed_pseudogene	Gm11450	ENSMUST00000121144	processed_pseudogene		2	1	162805590	333
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000176904	protein_coding		15	1	79895261	650
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000230410	retained_intron		15	1	79897748	3053
ENSMUSG00000060988	protein_coding	Galnt13	ENSMUST00000136642	protein_coding		2	1	54436491	728
ENSMUSG00000086030	lincRNA	Gm14255	ENSMUST00000128846	lincRNA		2	-1	162868194	248
ENSMUSG00000025900	protein_coding	Rp1	ENSMUST00000027032	protein_coding		1	-1	4360314	6869
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000175801	retained_intron		15	1	79897823	739
ENSMUSG00000060988	protein_coding	Galnt13	ENSMUST00000068595	protein_coding	principal1	2	1	54516540	1671
ENSMUSG00000083567	processed_pseudogene	Gm11451	ENSMUST00000118946	processed_pseudogene		2	-1	162899523	630
ENSMUSG00000104123	TEC	Gm37483	ENSMUST00000194382	TEC		1	-1	4364829	1484
ENSMUSG00000054520	protein_coding	Sh3bp2	ENSMUST00000125817	protein_coding		5	1	34525838	416
ENSMUSG00000082514	processed_pseudogene	Gm11452	ENSMUST00000122376	processed_pseudogene		2	1	162907924	690
ENSMUSG00000085497	lincRNA	Gm15985	ENSMUST00000137731	lincRNA		5	-1	74734451	343
ENSMUSG00000024091	protein_coding	Vapa	ENSMUST00000024897	protein_coding	principal1	17	-1	65613555	3369
ENSMUSG00000045128	protein_coding	Rpl18a	ENSMUST00000054220	protein_coding	principal1	8	-1	70897412	1260
ENSMUSG00000118599	unitary_pseudogene	AC122792.1	ENSMUST00000239174	unitary_pseudogene		1	-1	183269574	232
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000230135	protein_coding		15	1	79900164	599
ENSMUSG00000106987	lincRNA	Gm42575	ENSMUST00000202942	lincRNA		5	1	74749882	1674
ENSMUSG00000025538	protein_coding	Sumf2	ENSMUST00000137357	nonsense_mediated_decay		5	1	129847020	1656
ENSMUSG00000044034	protein_coding	Npb	ENSMUST00000106194	protein_coding	alternative2	11	1	120608477	530
ENSMUSG00000045128	protein_coding	Rpl18a	ENSMUST00000212796	protein_coding		8	-1	70897396	679
ENSMUSG00000053868	protein_coding	Gm5142	ENSMUST00000224214	lincRNA		14	-1	59178749	626
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000176644	retained_intron		15	1	79900202	2087
ENSMUSG00000024215	protein_coding	Spdef	ENSMUST00000025054	protein_coding	principal2	17	-1	27728953	1921
ENSMUSG00000024091	protein_coding	Vapa	ENSMUST00000232686	protein_coding		17	-1	65594970	979
ENSMUSG00000096630	protein_coding	Vmn2r26	ENSMUST00000032238	protein_coding	principal1	6	1	124024568	6529
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000230741	protein_coding		15	1	79900342	420
ENSMUSG00000044034	protein_coding	Npb	ENSMUST00000106195	protein_coding	principal3	11	1	120608477	542
ENSMUSG00000045128	protein_coding	Rpl18a	ENSMUST00000212019	retained_intron		8	-1	70897398	795
ENSMUSG00000098194	processed_pseudogene	Gm7286	ENSMUST00000182691	processed_pseudogene		9	-1	45836935	1007
ENSMUSG00000096630	protein_coding	Vmn2r26	ENSMUST00000232707	nonsense_mediated_decay		6	1	124024568	7937
ENSMUSG00000053868	protein_coding	Gm5142	ENSMUST00000066558	protein_coding	principal1	14	-1	59178749	626
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000175827	retained_intron		15	1	79906123	721
ENSMUSG00000096630	protein_coding	Vmn2r26	ENSMUST00000233955	nonsense_mediated_decay		6	1	124024568	6659
ENSMUSG00000024215	protein_coding	Spdef	ENSMUST00000233880	retained_intron		17	-1	27718349	1200
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000168095	nonsense_mediated_decay		9	-1	20478270	3208
ENSMUSG00000044034	protein_coding	Npb	ENSMUST00000061309	protein_coding		11	1	120608505	418
ENSMUSG00000025538	protein_coding	Sumf2	ENSMUST00000153063	processed_transcript		5	1	129852511	1117
ENSMUSG00000045128	protein_coding	Rpl18a	ENSMUST00000212129	nonsense_mediated_decay		8	-1	70897400	578
ENSMUSG00000025538	protein_coding	Sumf2	ENSMUST00000122826	processed_transcript		5	1	129852511	887
ENSMUSG00000045128	protein_coding	Rpl18a	ENSMUST00000212709	protein_coding		8	-1	70897283	700
ENSMUSG00000045128	protein_coding	Rpl18a	ENSMUST00000212494	protein_coding		8	-1	70897412	473
ENSMUSG00000104011	lincRNA	Gm32391	ENSMUST00000191839	lincRNA		1	1	164462442	540
ENSMUSG00000024215	protein_coding	Spdef	ENSMUST00000127622	retained_intron		17	-1	27717719	1045
ENSMUSG00000045128	protein_coding	Rpl18a	ENSMUST00000213053	nonsense_mediated_decay		8	-1	70897395	576
ENSMUSG00000103226	processed_pseudogene	Gm37732	ENSMUST00000194377	processed_pseudogene		1	1	164489060	316
ENSMUSG00000024215	protein_coding	Spdef	ENSMUST00000114870	protein_coding	alternative2	17	-1	27728955	1568
ENSMUSG00000097281	lincRNA	Gm26685	ENSMUST00000181831	lincRNA		1	1	164503309	2023
ENSMUSG00000039110	protein_coding	Mycbpap	ENSMUST00000040692	protein_coding		11	-1	94507355	1512
ENSMUSG00000045128	protein_coding	Rpl18a	ENSMUST00000212378	protein_coding		8	-1	70897399	393
ENSMUSG00000024215	protein_coding	Spdef	ENSMUST00000138970	protein_coding		17	-1	27728924	620
ENSMUSG00000097719	processed_pseudogene	Rpl31-ps18	ENSMUST00000180885	processed_pseudogene		19	1	51792226	377
ENSMUSG00000091531	protein_coding	Olfr102	ENSMUST00000217590	protein_coding	principal1	17	-1	37317054	2783
ENSMUSG00000024215	protein_coding	Spdef	ENSMUST00000167489	protein_coding	principal2	17	-1	27728889	1708
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000109620	protein_coding	alternative2	15	1	79892408	2459
ENSMUSG00000117867	lincRNA	Gm50330	ENSMUST00000237555	lincRNA		19	-1	51920333	1077
ENSMUSG00000009585	protein_coding	Apobec3	ENSMUST00000165537	protein_coding	principal3	15	1	79892408	2360
ENSMUSG00000118173	lincRNA	Gm50329	ENSMUST00000235616	lincRNA		19	1	51913963	306
ENSMUSG00000086485	lincRNA	Gm15458	ENSMUST00000156950	lincRNA		17	1	27735220	709
ENSMUSG00000026496	protein_coding	Parp1	ENSMUST00000194608	nonsense_mediated_decay		1	1	180568924	392
ENSMUSG00000115902	antisense	AC113595.1	ENSMUST00000230175	antisense		15	1	79889532	3589
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000102532	protein_coding	principal1	9	-1	107609229	3191
ENSMUSG00000091531	protein_coding	Olfr102	ENSMUST00000169373	protein_coding	principal1	17	-1	37314437	1027
ENSMUSG00000085846	antisense	Gm15597	ENSMUST00000145924	antisense		17	-1	27965316	1050
ENSMUSG00000080731	transcribed_processed_pseudogene	Rps2-ps9	ENSMUST00000232887	processed_transcript		17	1	27784379	682
ENSMUSG00000080731	transcribed_processed_pseudogene	Rps2-ps9	ENSMUST00000121414	transcribed_processed_pseudogene		17	1	27784424	823
ENSMUSG00000102389	TEC	D630023O14Rik	ENSMUST00000191913	TEC		1	1	164575455	3099
ENSMUSG00000116571	bidirectional_promoter_lncRNA	Gm49741	ENSMUST00000231767	bidirectional_promoter_lncRNA		17	1	27623497	769
ENSMUSG00000020716	protein_coding	Nf1	ENSMUST00000108251	protein_coding	alternative2	11	1	79339792	9217
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000102530	protein_coding	principal1	9	-1	107609199	3410
ENSMUSG00000117161	processed_pseudogene	Gm49803	ENSMUST00000233253	processed_pseudogene		17	-1	27868978	334
ENSMUSG00000102163	lincRNA	Gm36945	ENSMUST00000192040	lincRNA		1	-1	164712513	864
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000146212	retained_intron		8	-1	22706578	4845
ENSMUSG00000102163	lincRNA	Gm36945	ENSMUST00000193985	lincRNA		1	-1	164712541	551
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000126496	retained_intron		8	-1	22669026	817
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000150259	retained_intron		8	-1	22706540	3587
ENSMUSG00000103383	lincRNA	Gm37754	ENSMUST00000194406	lincRNA		1	1	164631757	452
ENSMUSG00000117338	protein_coding	Gm49804	ENSMUST00000233710	protein_coding	principal1	17	-1	27635222	891
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000144583	retained_intron		8	-1	22706539	1106
ENSMUSG00000102761	lincRNA	Gm37184	ENSMUST00000194720	lincRNA		1	1	164681982	650
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000131767	protein_coding		8	-1	22694065	300
ENSMUSG00000020716	protein_coding	Nf1	ENSMUST00000071325	protein_coding	principal2	11	1	79339825	11917
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000102529	protein_coding	principal1	9	-1	107605402	2875
ENSMUSG00000102897	lincRNA	Gm37853	ENSMUST00000195748	lincRNA		1	-1	164698233	660
ENSMUSG00000039067	protein_coding	Psmd7	ENSMUST00000044106	protein_coding	principal1	8	-1	107588464	1581
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000144895	retained_intron		8	-1	22706559	2423
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000226872	protein_coding		15	1	76477435	2104
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000126439	retained_intron		8	-1	22706574	2416
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000177074	protein_coding	alternative2	9	-1	105494420	2664
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000102531	protein_coding	principal1	9	-1	107609193	2958
ENSMUSG00000039067	protein_coding	Psmd7	ENSMUST00000213080	retained_intron		8	-1	107588458	860
ENSMUSG00000049618	protein_coding	Olfr103	ENSMUST00000173472	protein_coding	principal1	17	-1	37339698	3079
ENSMUSG00000095544	unprocessed_pseudogene	Vmn2r-ps33	ENSMUST00000175691	unprocessed_pseudogene		6	-1	124082601	904
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000149093	retained_intron		8	-1	22706563	4291
ENSMUSG00000002007	protein_coding	Srpk3	ENSMUST00000002081	protein_coding	principal1	X	1	73774405	1981
ENSMUSG00000031537	protein_coding	Ikbkb	ENSMUST00000150214	processed_transcript		8	-1	22706525	601
ENSMUSG00000049618	protein_coding	Olfr103	ENSMUST00000058826	protein_coding	principal1	17	-1	37337230	942
ENSMUSG00000032741	protein_coding	Tpcn1	ENSMUST00000046426	protein_coding	principal1	5	-1	120588673	4712
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000195472	retained_intron		9	-1	107601306	827
ENSMUSG00000095858	protein_coding	Olfr104-ps	ENSMUST00000216996	processed_transcript		17	1	37359582	3622
ENSMUSG00000095858	protein_coding	Olfr104-ps	ENSMUST00000178766	protein_coding	alternative2	17	1	37359582	1972
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000193234	retained_intron		9	-1	107602166	358
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000112558	protein_coding	principal3	9	-1	105495094	5642
ENSMUSG00000095858	protein_coding	Olfr104-ps	ENSMUST00000215398	protein_coding	principal5	17	1	37359582	2771
ENSMUSG00000020716	protein_coding	Nf1	ENSMUST00000131800	retained_intron		11	1	79339887	3851
ENSMUSG00000092542	unprocessed_pseudogene	Olfr757-ps1	ENSMUST00000172798	unprocessed_pseudogene		17	1	37376812	413
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000194433	protein_coding		9	-1	107605269	709
ENSMUSG00000094884	protein_coding	Olfr105-ps	ENSMUST00000214591	processed_transcript		17	1	37379033	3634
ENSMUSG00000000957	protein_coding	Mmp14	ENSMUST00000089688	protein_coding	principal1	14	1	54431612	2596
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000115562	protein_coding	principal3	9	-1	20492746	3557
ENSMUSG00000094884	protein_coding	Olfr105-ps	ENSMUST00000215518	protein_coding	principal1	17	1	37379033	3778
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000072838	protein_coding		15	1	76477445	2018
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000193180	protein_coding		9	-1	107606916	1023
ENSMUSG00000002007	protein_coding	Srpk3	ENSMUST00000136664	retained_intron		X	1	73774405	2711
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000167457	protein_coding		9	-1	20492746	4262
ENSMUSG00000035522	protein_coding	Tsga8	ENSMUST00000049420	protein_coding	principal1	X	-1	83487924	1070
ENSMUSG00000002007	protein_coding	Srpk3	ENSMUST00000137045	retained_intron		X	1	73777945	501
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000195662	protein_coding		9	-1	107606683	623
ENSMUSG00000028580	protein_coding	Pum1	ENSMUST00000030315	protein_coding	principal3	4	1	130663321	5389
ENSMUSG00000000957	protein_coding	Mmp14	ENSMUST00000197874	nonsense_mediated_decay		14	1	54431623	718
ENSMUSG00000032741	protein_coding	Tpcn1	ENSMUST00000200708	retained_intron		5	-1	120588612	1705
ENSMUSG00000000957	protein_coding	Mmp14	ENSMUST00000225641	protein_coding		14	1	54431633	3238
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000194606	protein_coding		9	-1	107606681	348
ENSMUSG00000002007	protein_coding	Srpk3	ENSMUST00000139630	retained_intron		X	1	73777978	515
ENSMUSG00000032741	protein_coding	Tpcn1	ENSMUST00000202072	retained_intron		5	-1	120588594	2622
ENSMUSG00000084281	processed_pseudogene	Gm14770	ENSMUST00000122197	processed_pseudogene		X	1	84879887	312
ENSMUSG00000000957	protein_coding	Mmp14	ENSMUST00000197947	retained_intron		14	1	54431664	726
ENSMUSG00000032741	protein_coding	Tpcn1	ENSMUST00000201601	retained_intron		5	-1	120588599	1443
ENSMUSG00000000957	protein_coding	Mmp14	ENSMUST00000198679	retained_intron		14	1	54431718	1548
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000227478	protein_coding	principal1	15	1	76477445	2084
ENSMUSG00000028580	protein_coding	Pum1	ENSMUST00000122847	retained_intron		4	1	130663366	1273
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000228371	protein_coding		15	1	76477445	2102
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000195057	protein_coding		9	-1	107609220	453
ENSMUSG00000000957	protein_coding	Mmp14	ENSMUST00000196155	protein_coding		14	1	54432436	334
ENSMUSG00000099383	unprocessed_pseudogene	Gm28925	ENSMUST00000188586	unprocessed_pseudogene		1	-1	65421937	168
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000228388	retained_intron		15	1	76477449	3133
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000193551	processed_transcript		9	-1	107607185	358
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000169558	protein_coding	alternative2	9	-1	20492742	3160
ENSMUSG00000100504	unprocessed_pseudogene	Gm28926	ENSMUST00000191063	unprocessed_pseudogene		1	-1	65421803	680
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000226860	nonsense_mediated_decay		15	1	76477455	1975
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000080386	protein_coding	principal3	9	-1	20492742	2417
ENSMUSG00000000957	protein_coding	Mmp14	ENSMUST00000226710	retained_intron		14	1	54438592	779
ENSMUSG00000024729	protein_coding	Ms4a20	ENSMUST00000025635	protein_coding	principal1	19	-1	11130876	1192
ENSMUSG00000057969	protein_coding	Sema3b	ENSMUST00000073448	protein_coding	principal1	9	-1	107606656	2987
ENSMUSG00000084204	unprocessed_pseudogene	Gm6584	ENSMUST00000119671	unprocessed_pseudogene		6	-1	130407935	447
ENSMUSG00000038765	protein_coding	Lmx1b	ENSMUST00000041730	protein_coding	alternative2	2	-1	33640608	4887
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000163348	protein_coding	alternative2	9	-1	20492742	2135
ENSMUSG00000082777	processed_pseudogene	Gm15861	ENSMUST00000120979	processed_pseudogene		6	-1	130401895	339
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000038118	protein_coding	principal3	9	-1	105495133	4876
ENSMUSG00000024729	protein_coding	Ms4a20	ENSMUST00000188756	retained_intron		19	-1	11111876	2523
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000230069	processed_transcript		15	1	76477461	826
ENSMUSG00000100340	processed_pseudogene	Gm28923	ENSMUST00000187755	processed_pseudogene		1	-1	65438985	322
ENSMUSG00000038765	protein_coding	Lmx1b	ENSMUST00000176067	protein_coding		2	-1	33640480	1420
ENSMUSG00000099998	processed_pseudogene	Gm6501	ENSMUST00000187178	processed_pseudogene		19	1	11121510	916
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000127295	retained_intron		X	1	82948870	3690
ENSMUSG00000026623	protein_coding	Lpgat1	ENSMUST00000110855	protein_coding	principal1	1	1	191717834	7233
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000229363	protein_coding		15	1	76477574	1965
ENSMUSG00000107492	unprocessed_pseudogene	Gm6590	ENSMUST00000203343	unprocessed_pseudogene		6	-1	130477028	687
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000166465	retained_intron		9	-1	20473462	782
ENSMUSG00000098212	unprocessed_pseudogene	Gm38706	ENSMUST00000182397	unprocessed_pseudogene		6	-1	130503581	2617
ENSMUSG00000025537	protein_coding	Phkg1	ENSMUST00000026617	protein_coding	principal1	5	-1	129879083	2374
ENSMUSG00000031166	protein_coding	Wdr13	ENSMUST00000033506	protein_coding	principal3	X	-1	8132808	4183
ENSMUSG00000098025	processed_pseudogene	Gm27013	ENSMUST00000182441	processed_pseudogene		6	-1	130522337	1024
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000085133	protein_coding	alternative2	9	-1	105521257	4665
ENSMUSG00000038765	protein_coding	Lmx1b	ENSMUST00000137559	processed_transcript		2	-1	33632283	476
ENSMUSG00000107787	processed_pseudogene	Gm44526	ENSMUST00000204664	processed_pseudogene		6	-1	130545299	121
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000227921	retained_intron		15	1	76477686	481
ENSMUSG00000026623	protein_coding	Lpgat1	ENSMUST00000138494	retained_intron		1	1	191718027	608
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000228720	retained_intron		15	1	76498009	560
ENSMUSG00000020716	protein_coding	Nf1	ENSMUST00000122917	processed_transcript		11	1	79448153	1178
ENSMUSG00000020716	protein_coding	Nf1	ENSMUST00000130979	processed_transcript		11	1	79448153	1115
ENSMUSG00000098115	processed_pseudogene	Gm8816	ENSMUST00000182280	processed_pseudogene		6	1	130567639	1163
ENSMUSG00000025537	protein_coding	Phkg1	ENSMUST00000154932	protein_coding		5	-1	129874105	779
ENSMUSG00000026574	protein_coding	Dpt	ENSMUST00000027861	protein_coding	principal1	1	1	164796644	1724
ENSMUSG00000102324	TEC	Gm19721	ENSMUST00000195284	TEC		9	-1	107632539	1764
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000163427	nonsense_mediated_decay		9	-1	20492731	720
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000226238	protein_coding		15	1	76498236	654
ENSMUSG00000038765	protein_coding	Lmx1b	ENSMUST00000239476	protein_coding	principal2	2	-1	33640511	1219
ENSMUSG00000025537	protein_coding	Phkg1	ENSMUST00000140667	protein_coding		5	-1	129898549	502
ENSMUSG00000039110	protein_coding	Mycbpap	ENSMUST00000239238	protein_coding	alternative2	11	-1	94521556	3207
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000164825	protein_coding		9	-1	20490805	802
ENSMUSG00000103320	TEC	Gm37403	ENSMUST00000193775	TEC		1	-1	164876353	3521
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000228781	retained_intron		15	1	76499472	1427
ENSMUSG00000104403	TEC	Gm38011	ENSMUST00000193312	TEC		2	1	33614398	279
ENSMUSG00000026536	protein_coding	Ifi211	ENSMUST00000009340	protein_coding	principal1	1	-1	173913046	1785
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000164799	protein_coding		9	-1	20478254	378
ENSMUSG00000025537	protein_coding	Phkg1	ENSMUST00000154495	retained_intron		5	-1	129870087	670
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000230505	retained_intron		15	1	76499647	1247
ENSMUSG00000025537	protein_coding	Phkg1	ENSMUST00000200832	processed_transcript		5	-1	129871977	2119
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000169269	protein_coding		9	-1	20492701	752
ENSMUSG00000106806	processed_pseudogene	Gm17906	ENSMUST00000202480	processed_pseudogene		5	1	74883335	901
ENSMUSG00000039110	protein_coding	Mycbpap	ENSMUST00000093945	protein_coding	principal2	11	-1	94521742	3168
ENSMUSG00000022556	protein_coding	Hsf1	ENSMUST00000228688	protein_coding		15	1	76499966	578
ENSMUSG00000024645	protein_coding	Timm21	ENSMUST00000025547	protein_coding	principal1	18	-1	84951524	2418
ENSMUSG00000024217	protein_coding	Snrpc	ENSMUST00000232873	protein_coding	principal1	17	1	27838150	984
ENSMUSG00000025537	protein_coding	Phkg1	ENSMUST00000200922	retained_intron		5	-1	129879088	1540
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000164250	protein_coding		9	-1	20492711	618
ENSMUSG00000059475	protein_coding	Zfp426	ENSMUST00000166005	protein_coding	principal3	9	-1	20478157	1653
ENSMUSG00000020716	protein_coding	Nf1	ENSMUST00000146699	retained_intron		11	1	79536908	4053
ENSMUSG00000024645	protein_coding	Timm21	ENSMUST00000235548	retained_intron		18	-1	84951513	1236
ENSMUSG00000026623	protein_coding	Lpgat1	ENSMUST00000110856	protein_coding		1	1	191718389	2792
ENSMUSG00000021610	protein_coding	Clptm1l	ENSMUST00000022102	protein_coding	principal1	13	1	73604006	2340
ENSMUSG00000078212	processed_pseudogene	Gm3757	ENSMUST00000125878	processed_pseudogene		X	1	4882412	675
ENSMUSG00000024217	protein_coding	Snrpc	ENSMUST00000137581	retained_intron		17	1	27840084	6107
ENSMUSG00000024217	protein_coding	Snrpc	ENSMUST00000233752	protein_coding		17	1	27840135	1013
ENSMUSG00000020716	protein_coding	Nf1	ENSMUST00000137997	protein_coding		11	1	79546308	4133
ENSMUSG00000026623	protein_coding	Lpgat1	ENSMUST00000130876	protein_coding		1	1	191718521	764
ENSMUSG00000026573	protein_coding	Xcl1	ENSMUST00000027860	protein_coding	principal1	1	-1	164935527	523
ENSMUSG00000024217	protein_coding	Snrpc	ENSMUST00000233657	protein_coding		17	1	27840155	882
ENSMUSG00000021610	protein_coding	Clptm1l	ENSMUST00000221417	retained_intron		13	1	73612315	334
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000084105	protein_coding	principal3	3	-1	63850991	6245
ENSMUSG00000024645	protein_coding	Timm21	ENSMUST00000235640	retained_intron		18	-1	84951505	2503
ENSMUSG00000051728	protein_coding	Fam243	ENSMUST00000062638	protein_coding	principal1	16	-1	92321441	2677
ENSMUSG00000042631	protein_coding	Xkr7	ENSMUST00000037235	protein_coding	principal1	2	1	153031852	2711
ENSMUSG00000073758	protein_coding	Sh3d21	ENSMUST00000094760	protein_coding		4	-1	126162626	1859
ENSMUSG00000039110	protein_coding	Mycbpap	ENSMUST00000123496	retained_intron		11	-1	94521742	3415
ENSMUSG00000024645	protein_coding	Timm21	ENSMUST00000236812	retained_intron		18	-1	84948143	686
ENSMUSG00000024217	protein_coding	Snrpc	ENSMUST00000071006	protein_coding	principal1	17	1	27840087	758
ENSMUSG00000021610	protein_coding	Clptm1l	ENSMUST00000222343	retained_intron		13	1	73616804	830
ENSMUSG00000086497	processed_pseudogene	Gm15259	ENSMUST00000151262	processed_pseudogene		X	1	4905423	291
ENSMUSG00000039110	protein_coding	Mycbpap	ENSMUST00000149872	retained_intron		11	-1	94503558	382
ENSMUSG00000103659	antisense	Gm32569	ENSMUST00000194659	antisense		1	-1	164815299	535
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000162269	protein_coding	alternative2	3	-1	63851257	6539
ENSMUSG00000116967	processed_pseudogene	Smim34	ENSMUST00000231670	processed_pseudogene		16	-1	92329254	358
ENSMUSG00000024645	protein_coding	Timm21	ENSMUST00000235629	retained_intron		18	-1	84948048	673
ENSMUSG00000021610	protein_coding	Clptm1l	ENSMUST00000221130	retained_intron		13	1	73617585	736
ENSMUSG00000031813	protein_coding	Mvb12a	ENSMUST00000212954	nonsense_mediated_decay		8	1	71542922	392
ENSMUSG00000039110	protein_coding	Mycbpap	ENSMUST00000151993	retained_intron		11	-1	94510161	656
ENSMUSG00000076900	TR_J_gene	Traj29	ENSMUST00000103712	TR_J_gene	principal1	14	1	54190946	60
ENSMUSG00000095436	processed_pseudogene	Gm15254	ENSMUST00000149567	processed_pseudogene		X	-1	4907254	273
ENSMUSG00000103659	antisense	Gm32569	ENSMUST00000193955	antisense		1	-1	164899591	604
ENSMUSG00000031813	protein_coding	Mvb12a	ENSMUST00000212341	retained_intron		8	1	71542928	1519
ENSMUSG00000056941	protein_coding	Commd7	ENSMUST00000071852	protein_coding	principal1	2	-1	153632781	3210
ENSMUSG00000049349	protein_coding	Gm5105	ENSMUST00000053318	protein_coding	principal1	3	-1	138067388	1665
ENSMUSG00000104117	processed_transcript	Gm20743	ENSMUST00000191735	lincRNA		1	1	164863133	1576
ENSMUSG00000024645	protein_coding	Timm21	ENSMUST00000237949	retained_intron		18	-1	84951524	2499
ENSMUSG00000034173	protein_coding	Zbed5	ENSMUST00000041466	protein_coding	principal1	5	1	129895723	2492
ENSMUSG00000076901	TR_J_gene	Traj28	ENSMUST00000103713	TR_J_gene	principal1	14	1	54191661	65
ENSMUSG00000024645	protein_coding	Timm21	ENSMUST00000235745	processed_transcript		18	-1	84950665	575
ENSMUSG00000104117	processed_transcript	Gm20743	ENSMUST00000194322	antisense		1	1	164863358	2830
ENSMUSG00000024645	protein_coding	Timm21	ENSMUST00000235591	retained_intron		18	-1	84951507	821
ENSMUSG00000070354	protein_coding	Evi2	ENSMUST00000093983	nonsense_mediated_decay		11	-1	79530559	3914
ENSMUSG00000094860	protein_coding	Btbd35f27	ENSMUST00000178143	protein_coding	principal1	X	1	4952135	1943
ENSMUSG00000034173	protein_coding	Zbed5	ENSMUST00000202430	retained_intron		5	1	129895768	2478
ENSMUSG00000092396	unprocessed_pseudogene	Olfr758-ps1	ENSMUST00000173901	unprocessed_pseudogene		17	1	37387378	841
ENSMUSG00000028580	protein_coding	Pum1	ENSMUST00000143277	protein_coding		4	1	130663367	693
ENSMUSG00000034173	protein_coding	Zbed5	ENSMUST00000077320	protein_coding		5	1	129895778	730
ENSMUSG00000089714	lincRNA	Gm16092	ENSMUST00000161449	lincRNA		1	-1	85527161	2405
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000159676	protein_coding	alternative2	3	-1	63851283	6560
ENSMUSG00000118632	unprocessed_pseudogene	AC147806.3	ENSMUST00000239378	unprocessed_pseudogene		1	1	85526690	355
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000059973	protein_coding	alternative2	3	-1	63850991	6241
ENSMUSG00000068252	protein_coding	Apol7b	ENSMUST00000089469	protein_coding	principal1	15	-1	77447460	2227
ENSMUSG00000101751	unprocessed_pseudogene	Gm2427	ENSMUST00000189121	unprocessed_pseudogene		1	1	85501090	881
ENSMUSG00000118607	protein_coding	AC147806.2	ENSMUST00000113407	protein_coding	principal5	1	1	85549687	891
ENSMUSG00000070354	protein_coding	Evi2	ENSMUST00000170422	protein_coding	principal1	11	-1	79530589	3944
ENSMUSG00000068252	protein_coding	Apol7b	ENSMUST00000229434	protein_coding		15	-1	77446196	645
ENSMUSG00000034509	protein_coding	Mad2l1bp	ENSMUST00000171172	protein_coding	principal1	17	-1	46153553	1272
ENSMUSG00000118607	protein_coding	AC147806.2	ENSMUST00000239236	protein_coding	alternative2	1	1	85526602	2798
ENSMUSG00000039639	protein_coding	Kcne1	ENSMUST00000051705	protein_coding	principal1	16	-1	92359468	3174
ENSMUSG00000068252	protein_coding	Apol7b	ENSMUST00000149824	retained_intron		15	-1	77447492	472
ENSMUSG00000112277	lincRNA	Gm48867	ENSMUST00000218192	lincRNA		10	-1	94999442	620
ENSMUSG00000105680	processed_pseudogene	Gm18340	ENSMUST00000196342	processed_pseudogene		12	1	115526351	609
ENSMUSG00000090066	protein_coding	1110002E22Rik	ENSMUST00000163080	protein_coding	principal1	3	1	138065052	9741
ENSMUSG00000082233	processed_pseudogene	Gm6506	ENSMUST00000119775	processed_pseudogene		15	-1	77444420	1132
ENSMUSG00000073758	protein_coding	Sh3d21	ENSMUST00000142891	processed_transcript		4	-1	126162665	1884
ENSMUSG00000090066	protein_coding	1110002E22Rik	ENSMUST00000184925	processed_transcript		3	1	138071597	465
ENSMUSG00000104681	lincRNA	Gm43001	ENSMUST00000198925	lincRNA		5	1	129363562	603
ENSMUSG00000034391	protein_coding	Fbxo15	ENSMUST00000224467	protein_coding	alternative2	18	1	84934782	1910
ENSMUSG00000076902	TR_J_gene	Traj27	ENSMUST00000103714	TR_J_gene	principal1	14	1	54192303	59
ENSMUSG00000056941	protein_coding	Commd7	ENSMUST00000147822	retained_intron		2	-1	153632731	3467
ENSMUSG00000031813	protein_coding	Mvb12a	ENSMUST00000034272	protein_coding	principal1	8	1	71542930	1062
ENSMUSG00000104593	IG_V_pseudogene	Ighv1-65	ENSMUST00000198790	IG_V_pseudogene		12	-1	115532485	349
ENSMUSG00000039639	protein_coding	Kcne1	ENSMUST00000166707	protein_coding	principal1	16	-1	92358874	602
ENSMUSG00000104681	lincRNA	Gm43001	ENSMUST00000199076	lincRNA		5	1	129364120	192
ENSMUSG00000069971	protein_coding	4933402J07Rik	ENSMUST00000093342	protein_coding	principal1	8	1	87563853	1304
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000177143	protein_coding	alternative2	3	-1	63899472	6010
ENSMUSG00000086467	processed_transcript	4930571N24Rik	ENSMUST00000142914	antisense		15	1	77427979	598
ENSMUSG00000105599	processed_pseudogene	Gm9238	ENSMUST00000196181	processed_pseudogene		12	-1	115546397	329
ENSMUSG00000112677	TEC	Gm48868	ENSMUST00000219913	TEC		10	1	95116379	1353
ENSMUSG00000031813	protein_coding	Mvb12a	ENSMUST00000212234	retained_intron		8	1	71542939	387
ENSMUSG00000032562	protein_coding	Gnai2	ENSMUST00000192615	protein_coding	principal1	9	-1	107635312	1777
ENSMUSG00000094358	processed_pseudogene	Gm14370	ENSMUST00000122460	processed_pseudogene		X	1	5144852	868
ENSMUSG00000034391	protein_coding	Fbxo15	ENSMUST00000225445	nonsense_mediated_decay		18	1	84935028	2532
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000176861	protein_coding		3	-1	63702043	805
ENSMUSG00000086467	processed_transcript	4930571N24Rik	ENSMUST00000132871	retained_intron		15	1	77428012	582
ENSMUSG00000034391	protein_coding	Fbxo15	ENSMUST00000223789	protein_coding	alternative2	18	1	84952116	1557
ENSMUSG00000056941	protein_coding	Commd7	ENSMUST00000109782	protein_coding		2	-1	153632740	1343
ENSMUSG00000031813	protein_coding	Mvb12a	ENSMUST00000212326	nonsense_mediated_decay		8	1	71542943	779
ENSMUSG00000104873	TEC	Gm40332	ENSMUST00000199847	TEC		5	-1	129501001	938
ENSMUSG00000086467	processed_transcript	4930571N24Rik	ENSMUST00000229381	antisense		15	1	77428012	669
ENSMUSG00000072791	protein_coding	Abcb5	ENSMUST00000035515	protein_coding	principal1	12	-1	118966421	3876
ENSMUSG00000076903	TR_J_gene	Traj26	ENSMUST00000103715	TR_J_gene	principal1	14	1	54194490	60
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000175947	protein_coding		3	-1	63851359	3274
ENSMUSG00000031813	protein_coding	Mvb12a	ENSMUST00000212659	retained_intron		8	1	71544859	814
ENSMUSG00000115270	TEC	5430430K15Rik	ENSMUST00000226138	TEC		14	1	54446318	1544
ENSMUSG00000034391	protein_coding	Fbxo15	ENSMUST00000224427	retained_intron		18	1	84959238	651
ENSMUSG00000076904	TR_J_gene	Traj25	ENSMUST00000103716	TR_J_gene	principal1	14	1	54194815	57
ENSMUSG00000116693	lincRNA	Gm29805	ENSMUST00000232607	lincRNA		16	-1	92382683	1099
ENSMUSG00000034391	protein_coding	Fbxo15	ENSMUST00000225015	protein_coding		18	1	84965510	623
ENSMUSG00000034391	protein_coding	Fbxo15	ENSMUST00000037718	protein_coding	principal2	18	1	84935158	1437
ENSMUSG00000031813	protein_coding	Mvb12a	ENSMUST00000212336	retained_intron		8	1	71546732	684
ENSMUSG00000080792	unprocessed_pseudogene	Gm14367	ENSMUST00000119214	unprocessed_pseudogene		X	1	5148676	1497
ENSMUSG00000112501	lincRNA	Gm33091	ENSMUST00000217798	lincRNA		10	-1	95136874	748
ENSMUSG00000032562	protein_coding	Gnai2	ENSMUST00000055704	protein_coding	principal1	9	-1	107635367	2215
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000159188	protein_coding		3	-1	63899442	747
ENSMUSG00000072791	protein_coding	Abcb5	ENSMUST00000177311	retained_intron		12	-1	118890759	463
ENSMUSG00000073758	protein_coding	Sh3d21	ENSMUST00000097891	protein_coding	principal1	4	-1	126163491	2384
ENSMUSG00000112481	lincRNA	Gm29684	ENSMUST00000220248	lincRNA		10	-1	95145825	1982
ENSMUSG00000028580	protein_coding	Pum1	ENSMUST00000097864	protein_coding	alternative1	4	1	130663386	4017
ENSMUSG00000112682	TEC	Gm48874	ENSMUST00000220149	TEC		10	1	95160361	5300
ENSMUSG00000022864	protein_coding	D16Ertd472e	ENSMUST00000231973	protein_coding	principal1	16	-1	78576634	5687
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000161052	protein_coding		3	-1	63899373	1472
ENSMUSG00000072791	protein_coding	Abcb5	ENSMUST00000100982	processed_transcript		12	-1	118924580	1591
ENSMUSG00000107519	unprocessed_pseudogene	Gm26996	ENSMUST00000204418	unprocessed_pseudogene		6	-1	130591682	1359
ENSMUSG00000072874	lincRNA	Gm6116	ENSMUST00000101121	lincRNA		5	1	74949190	1437
ENSMUSG00000070493	protein_coding	Chchd2	ENSMUST00000094280	protein_coding	principal1	5	-1	129887470	915
ENSMUSG00000017740	protein_coding	Slc12a5	ENSMUST00000125867	nonsense_mediated_decay		2	1	164960802	422
ENSMUSG00000098084	processed_pseudogene	Gm26914	ENSMUST00000182262	processed_pseudogene		6	1	130617488	223
ENSMUSG00000073758	protein_coding	Sh3d21	ENSMUST00000152402	processed_transcript		4	-1	126162601	2071
ENSMUSG00000107306	TEC	Gm42577	ENSMUST00000201367	TEC		5	-1	74989066	3211
ENSMUSG00000098214	processed_pseudogene	Gm27047	ENSMUST00000183072	processed_pseudogene		6	-1	130630874	1819
ENSMUSG00000035804	protein_coding	Ins1	ENSMUST00000039652	protein_coding	principal1	19	1	52264297	1062
ENSMUSG00000036834	protein_coding	Plch1	ENSMUST00000160638	protein_coding	alternative2	3	-1	63850991	6271
ENSMUSG00000073758	protein_coding	Sh3d21	ENSMUST00000141638	processed_transcript		4	-1	126162656	1426
ENSMUSG00000022864	protein_coding	D16Ertd472e	ENSMUST00000232052	protein_coding	principal1	16	-1	78576657	6127
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000112557	processed_transcript		9	-1	105436584	1514
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000175697	retained_intron		9	-1	105418255	255
ENSMUSG00000020687	protein_coding	Cdc27	ENSMUST00000093923	protein_coding	principal2	11	-1	104550483	5425
ENSMUSG00000118128	lincRNA	Gm50331	ENSMUST00000235733	lincRNA		19	1	52303521	2705
ENSMUSG00000032562	protein_coding	Gnai2	ENSMUST00000193538	retained_intron		9	-1	107616047	595
ENSMUSG00000110502	processed_pseudogene	Gm8804	ENSMUST00000212292	processed_pseudogene		8	1	105110624	798
ENSMUSG00000090131	processed_pseudogene	Gm16162	ENSMUST00000162296	processed_pseudogene		3	1	63825794	297
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000176656	retained_intron		9	-1	105432735	691
ENSMUSG00000118114	lincRNA	Gm50332	ENSMUST00000236031	lincRNA		19	1	52337165	1055
ENSMUSG00000022864	protein_coding	D16Ertd472e	ENSMUST00000114220	protein_coding	principal1	16	-1	78576647	2644
ENSMUSG00000032562	protein_coding	Gnai2	ENSMUST00000195231	retained_intron		9	-1	107616512	752
ENSMUSG00000031166	protein_coding	Wdr13	ENSMUST00000133292	nonsense_mediated_decay		X	-1	8132858	4197
ENSMUSG00000032562	protein_coding	Gnai2	ENSMUST00000193372	retained_intron		9	-1	107617472	752
ENSMUSG00000017740	protein_coding	Slc12a5	ENSMUST00000124372	processed_transcript		2	1	164960816	465
ENSMUSG00000028580	protein_coding	Pum1	ENSMUST00000097862	protein_coding	alternative1	4	1	130663406	3991
ENSMUSG00000032562	protein_coding	Gnai2	ENSMUST00000193394	protein_coding		9	-1	107626606	621
ENSMUSG00000037544	protein_coding	Dlgap5	ENSMUST00000043296	protein_coding	principal2	14	-1	47418407	2964
ENSMUSG00000070493	protein_coding	Chchd2	ENSMUST00000131645	retained_intron		5	-1	129887273	2069
ENSMUSG00000089679	antisense	Gm16299	ENSMUST00000162724	antisense		19	-1	53825128	2766
ENSMUSG00000032562	protein_coding	Gnai2	ENSMUST00000193835	retained_intron		9	-1	107635334	698
ENSMUSG00000020687	protein_coding	Cdc27	ENSMUST00000106962	protein_coding	alternative1	11	-1	104550392	3160
ENSMUSG00000031166	protein_coding	Wdr13	ENSMUST00000130832	protein_coding	alternative1	X	-1	8132770	4374
ENSMUSG00000022864	protein_coding	D16Ertd472e	ENSMUST00000114219	protein_coding	principal1	16	-1	78576657	1576
ENSMUSG00000032562	protein_coding	Gnai2	ENSMUST00000195762	retained_intron		9	-1	107620948	706
ENSMUSG00000094249	processed_pseudogene	Gm20091	ENSMUST00000179683	processed_pseudogene		10	-1	96409038	189
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000163879	protein_coding		9	-1	105495077	2408
ENSMUSG00000020687	protein_coding	Cdc27	ENSMUST00000127506	processed_transcript		11	-1	104513276	580
ENSMUSG00000037544	protein_coding	Dlgap5	ENSMUST00000177822	protein_coding		14	-1	47394253	727
ENSMUSG00000032562	protein_coding	Gnai2	ENSMUST00000192837	protein_coding		9	-1	107635337	421
ENSMUSG00000022864	protein_coding	D16Ertd472e	ENSMUST00000232528	protein_coding		16	-1	78576634	1007
ENSMUSG00000020687	protein_coding	Cdc27	ENSMUST00000106961	protein_coding		11	-1	104550478	1863
ENSMUSG00000032562	protein_coding	Gnai2	ENSMUST00000193876	protein_coding		9	-1	107635343	197
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000177000	retained_intron		9	-1	105443364	642
ENSMUSG00000022864	protein_coding	D16Ertd472e	ENSMUST00000114218	protein_coding	principal1	16	-1	78576657	1271
ENSMUSG00000020687	protein_coding	Cdc27	ENSMUST00000135303	processed_transcript		11	-1	104550620	486
ENSMUSG00000022403	protein_coding	St13	ENSMUST00000172107	protein_coding	principal1	15	-1	81400043	3346
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000176960	processed_transcript		9	-1	105494462	1072
ENSMUSG00000039208	protein_coding	Metrnl	ENSMUST00000106089	protein_coding	alternative2	11	1	121701544	1101
ENSMUSG00000022864	protein_coding	D16Ertd472e	ENSMUST00000231272	protein_coding		16	-1	78576708	746
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000176651	protein_coding		9	-1	105470390	899
ENSMUSG00000022864	protein_coding	D16Ertd472e	ENSMUST00000232329	processed_transcript		16	-1	78560244	557
ENSMUSG00000022403	protein_coding	St13	ENSMUST00000023039	protein_coding		15	-1	81399594	1089
ENSMUSG00000021779	protein_coding	Thrb	ENSMUST00000224470	protein_coding		14	1	17660261	375
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000176190	protein_coding		9	-1	105495047	823
ENSMUSG00000021779	protein_coding	Thrb	ENSMUST00000224597	protein_coding		14	1	17660532	426
ENSMUSG00000031166	protein_coding	Wdr13	ENSMUST00000127062	nonsense_mediated_decay		X	-1	8132823	1822
ENSMUSG00000037544	protein_coding	Dlgap5	ENSMUST00000180299	protein_coding	alternative2	14	-1	47418177	4067
ENSMUSG00000022403	protein_coding	St13	ENSMUST00000165582	protein_coding		15	-1	81399383	467
ENSMUSG00000116628	antisense	4930478L05Rik	ENSMUST00000231846	antisense		16	1	78560316	1880
ENSMUSG00000022403	protein_coding	St13	ENSMUST00000229847	retained_intron		15	-1	81385926	2906
ENSMUSG00000053411	protein_coding	Cbx7	ENSMUST00000109616	protein_coding		15	-1	79932652	2899
ENSMUSG00000021779	protein_coding	Thrb	ENSMUST00000224438	retained_intron		14	1	17660892	521
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000177189	retained_intron		9	-1	105495495	939
ENSMUSG00000030364	protein_coding	Clec2h	ENSMUST00000032518	protein_coding	principal1	6	1	128662385	2160
ENSMUSG00000037544	protein_coding	Dlgap5	ENSMUST00000178661	nonsense_mediated_decay		14	-1	47418207	4414
ENSMUSG00000048782	protein_coding	Insc	ENSMUST00000161800	protein_coding		7	1	114743694	451
ENSMUSG00000031166	protein_coding	Wdr13	ENSMUST00000115623	protein_coding	principal3	X	-1	8132820	1749
ENSMUSG00000030278	protein_coding	Cidec	ENSMUST00000113089	protein_coding	principal2	6	-1	113435760	1720
ENSMUSG00000037544	protein_coding	Dlgap5	ENSMUST00000179465	retained_intron		14	-1	47395961	549
ENSMUSG00000022723	protein_coding	Crybg3	ENSMUST00000129762	retained_intron		16	-1	59525614	4378
ENSMUSG00000022403	protein_coding	St13	ENSMUST00000163382	protein_coding		15	-1	81400077	621
ENSMUSG00000031166	protein_coding	Wdr13	ENSMUST00000131929	retained_intron		X	-1	8128517	774
ENSMUSG00000022403	protein_coding	St13	ENSMUST00000230906	retained_intron		15	-1	81394603	4026
ENSMUSG00000031166	protein_coding	Wdr13	ENSMUST00000148135	processed_transcript		X	-1	8132819	844
ENSMUSG00000037544	protein_coding	Dlgap5	ENSMUST00000111778	protein_coding		14	-1	47411666	909
ENSMUSG00000028580	protein_coding	Pum1	ENSMUST00000105992	protein_coding	alternative1	4	1	130663359	5058
ENSMUSG00000037544	protein_coding	Dlgap5	ENSMUST00000227174	retained_intron		14	-1	47406383	454
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000176363	protein_coding		9	-1	105495105	1082
ENSMUSG00000031166	protein_coding	Wdr13	ENSMUST00000153839	protein_coding		X	-1	8132845	774
ENSMUSG00000004821	protein_coding	Tmed11	ENSMUST00000004943	protein_coding	principal1	5	-1	108795363	763
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000176036	protein_coding		9	-1	105495483	710
ENSMUSG00000028580	protein_coding	Pum1	ENSMUST00000105991	protein_coding		4	1	130663359	4614
ENSMUSG00000030278	protein_coding	Cidec	ENSMUST00000032416	protein_coding	principal2	6	-1	113435756	1703
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000190802	processed_transcript		9	-1	105527319	833
ENSMUSG00000022403	protein_coding	St13	ENSMUST00000169204	protein_coding		15	-1	81400073	337
ENSMUSG00000030364	protein_coding	Clec2h	ENSMUST00000205225	nonsense_mediated_decay		6	1	128662386	1114
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000177334	protein_coding		9	-1	105494664	578
ENSMUSG00000037544	protein_coding	Dlgap5	ENSMUST00000178773	retained_intron		14	-1	47418200	577
ENSMUSG00000031166	protein_coding	Wdr13	ENSMUST00000149257	retained_intron		X	-1	8132511	958
ENSMUSG00000037544	protein_coding	Dlgap5	ENSMUST00000179392	processed_transcript		14	-1	47416507	400
ENSMUSG00000087449	sense_intronic	Gm12971	ENSMUST00000154720	sense_intronic		4	1	130758563	511
ENSMUSG00000030364	protein_coding	Clec2h	ENSMUST00000204416	protein_coding		6	1	128662387	386
ENSMUSG00000053411	protein_coding	Cbx7	ENSMUST00000089293	protein_coding	principal1	15	-1	79932639	3388
ENSMUSG00000045039	protein_coding	Megf8	ENSMUST00000128119	protein_coding	principal1	7	1	25317164	10040
ENSMUSG00000031166	protein_coding	Wdr13	ENSMUST00000130050	processed_transcript		X	-1	8132892	373
ENSMUSG00000090961	protein_coding	Vmn2r8	ENSMUST00000233865	nonsense_mediated_decay		5	-1	108808850	8177
ENSMUSG00000030278	protein_coding	Cidec	ENSMUST00000113091	protein_coding	alternative1	6	-1	113434764	785
ENSMUSG00000030364	protein_coding	Clec2h	ENSMUST00000204728	retained_intron		6	1	128662391	691
ENSMUSG00000090961	protein_coding	Vmn2r8	ENSMUST00000233220	retained_intron		5	-1	108808850	9129
ENSMUSG00000028070	protein_coding	Naxe	ENSMUST00000029708	protein_coding	principal1	3	-1	88058495	908
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000176787	retained_intron		9	-1	105495105	1449
ENSMUSG00000030278	protein_coding	Cidec	ENSMUST00000133348	protein_coding		6	-1	113434613	376
ENSMUSG00000032570	protein_coding	Atp2c1	ENSMUST00000186495	retained_intron		9	-1	105521414	1413
ENSMUSG00000033970	protein_coding	Rfc3	ENSMUST00000038131	protein_coding	principal1	5	-1	151651242	1317
ENSMUSG00000099988	processed_transcript	1700054A03Rik	ENSMUST00000235589	antisense		19	1	53033648	1353
ENSMUSG00000048782	protein_coding	Insc	ENSMUST00000136645	protein_coding		7	1	114745740	713
ENSMUSG00000082301	processed_pseudogene	Gm14032	ENSMUST00000117686	processed_pseudogene		2	1	55292065	1026
ENSMUSG00000095170	IG_V_gene	Ighv8-11	ENSMUST00000103536	IG_V_gene	principal1	12	-1	115567591	358
ENSMUSG00000085006	transcribed_unprocessed_pseudogene	BC021767	ENSMUST00000136988	processed_transcript		3	-1	94666101	905
ENSMUSG00000048782	protein_coding	Insc	ENSMUST00000139670	retained_intron		7	1	114753721	600
ENSMUSG00000039208	protein_coding	Metrnl	ENSMUST00000036742	protein_coding	principal2	11	1	121702411	1401
ENSMUSG00000099988	processed_transcript	1700054A03Rik	ENSMUST00000189904	antisense		19	1	53076218	622
ENSMUSG00000108018	processed_pseudogene	Gm43928	ENSMUST00000203737	processed_pseudogene		6	-1	113440894	409
ENSMUSG00000099988	processed_transcript	1700054A03Rik	ENSMUST00000235604	antisense		19	1	53076227	2234
ENSMUSG00000106283	processed_pseudogene	Rpl7a-ps2	ENSMUST00000200554	processed_pseudogene		12	1	115590423	774
ENSMUSG00000099988	processed_transcript	1700054A03Rik	ENSMUST00000237922	antisense		19	1	53076243	1571
ENSMUSG00000085006	transcribed_unprocessed_pseudogene	BC021767	ENSMUST00000126387	transcribed_unprocessed_pseudogene		3	-1	94670696	1716
ENSMUSG00000053411	protein_coding	Cbx7	ENSMUST00000176639	retained_intron		15	-1	79932768	6057
ENSMUSG00000059995	protein_coding	Atxn7l3	ENSMUST00000145484	retained_intron		11	-1	102293444	3102
ENSMUSG00000033970	protein_coding	Rfc3	ENSMUST00000127366	retained_intron		5	-1	151644131	706
ENSMUSG00000039208	protein_coding	Metrnl	ENSMUST00000125580	protein_coding		11	1	121702763	652
ENSMUSG00000053411	protein_coding	Cbx7	ENSMUST00000109615	protein_coding		15	-1	79932540	710
ENSMUSG00000033970	protein_coding	Rfc3	ENSMUST00000156667	retained_intron		5	-1	151644762	503
ENSMUSG00000090961	protein_coding	Vmn2r8	ENSMUST00000233055	protein_coding		5	-1	108808850	8814
ENSMUSG00000022099	protein_coding	Dmtn	ENSMUST00000022694	protein_coding	alternative2	14	-1	70627308	5418
ENSMUSG00000024213	protein_coding	Nudt3	ENSMUST00000025050	protein_coding	principal1	17	-1	27623495	2223
ENSMUSG00000045039	protein_coding	Megf8	ENSMUST00000153077	retained_intron		7	1	25345981	5669
ENSMUSG00000099988	processed_transcript	1700054A03Rik	ENSMUST00000187368	antisense		19	1	53076252	780
ENSMUSG00000099988	processed_transcript	1700054A03Rik	ENSMUST00000236763	antisense		19	1	53076252	2513
ENSMUSG00000043639	protein_coding	Rbm20	ENSMUST00000164202	protein_coding	principal1	19	1	53677306	4892
ENSMUSG00000102425	TEC	Gm26616	ENSMUST00000195676	TEC		1	-1	133131782	3107
ENSMUSG00000099988	processed_transcript	1700054A03Rik	ENSMUST00000236249	retained_intron		19	1	53080777	1468
ENSMUSG00000053411	protein_coding	Cbx7	ENSMUST00000146719	protein_coding		15	-1	79933899	714
ENSMUSG00000090961	protein_coding	Vmn2r8	ENSMUST00000232952	protein_coding	alternative2	5	-1	108808850	7930
ENSMUSG00000102425	TEC	Gm26616	ENSMUST00000193049	TEC		1	-1	133131782	603
ENSMUSG00000095519	IG_V_gene	Ighv1-66	ENSMUST00000103537	IG_V_gene	principal1	12	-1	115593591	399
ENSMUSG00000090961	protein_coding	Vmn2r8	ENSMUST00000233745	protein_coding		5	-1	108808850	8751
ENSMUSG00000084199	processed_pseudogene	Gm12422	ENSMUST00000121431	processed_pseudogene		4	-1	47071947	302
ENSMUSG00000076905	TR_J_gene	Traj24	ENSMUST00000103717	TR_J_gene	principal1	14	1	54195638	63
ENSMUSG00000090961	protein_coding	Vmn2r8	ENSMUST00000172140	protein_coding	principal2	5	-1	108808850	7993
ENSMUSG00000072049	protein_coding	Vmn2r121	ENSMUST00000094491	protein_coding	principal1	X	-1	124135952	5482
ENSMUSG00000087040	lincRNA	Gm14033	ENSMUST00000128307	lincRNA		2	1	55411815	2265
ENSMUSG00000117896	lincRNA	AA387883	ENSMUST00000236393	lincRNA		19	1	52923181	1679
ENSMUSG00000024213	protein_coding	Nudt3	ENSMUST00000231742	protein_coding		17	-1	27597215	1523
ENSMUSG00000117896	lincRNA	AA387883	ENSMUST00000237126	lincRNA		19	1	52923242	710
ENSMUSG00000087040	lincRNA	Gm14033	ENSMUST00000155997	lincRNA		2	1	55411790	397
ENSMUSG00000043639	protein_coding	Rbm20	ENSMUST00000162910	protein_coding		19	1	53793308	465
ENSMUSG00000072049	protein_coding	Vmn2r121	ENSMUST00000233359	nonsense_mediated_decay		X	-1	124135952	5199
ENSMUSG00000095863	IG_V_gene	Ighv1-67	ENSMUST00000198646	IG_V_gene	principal1	12	-1	115604376	351
ENSMUSG00000072049	protein_coding	Vmn2r121	ENSMUST00000233504	nonsense_mediated_decay		X	-1	124135952	5638
ENSMUSG00000095863	IG_V_gene	Ighv1-67	ENSMUST00000103538	IG_V_gene		12	-1	115604233	294
ENSMUSG00000051050	protein_coding	Spink14	ENSMUST00000237843	retained_intron		18	1	44028461	3957
ENSMUSG00000082641	processed_pseudogene	Rpl30-ps5	ENSMUST00000117104	processed_pseudogene		2	-1	174441289	361
ENSMUSG00000053411	protein_coding	Cbx7	ENSMUST00000128931	protein_coding		15	-1	79971119	663
ENSMUSG00000022099	protein_coding	Dmtn	ENSMUST00000110984	protein_coding	principal2	14	-1	70627054	4176
ENSMUSG00000107495	TEC	Gm44215	ENSMUST00000204910	TEC		6	-1	128693783	2711
ENSMUSG00000096831	processed_pseudogene	Rps12-ps6	ENSMUST00000179239	processed_pseudogene		X	-1	124350123	399
ENSMUSG00000043639	protein_coding	Rbm20	ENSMUST00000161856	nonsense_mediated_decay		19	1	53843210	4663
ENSMUSG00000089807	processed_pseudogene	Gm16298	ENSMUST00000161107	processed_pseudogene		19	-1	53768310	420
ENSMUSG00000053411	protein_coding	Cbx7	ENSMUST00000132821	protein_coding		15	-1	79971118	528
ENSMUSG00000022099	protein_coding	Dmtn	ENSMUST00000228295	protein_coding		14	-1	70635978	2572
ENSMUSG00000053411	protein_coding	Cbx7	ENSMUST00000177044	protein_coding		15	-1	79932516	364
ENSMUSG00000053411	protein_coding	Cbx7	ENSMUST00000177061	retained_intron		15	-1	79933830	148
ENSMUSG00000095420	lincRNA	Astx1a	ENSMUST00000179529	lincRNA		X	1	124407642	1150
ENSMUSG00000094238	processed_pseudogene	Rps12-ps11	ENSMUST00000178427	processed_pseudogene		X	-1	124470357	399
ENSMUSG00000024213	protein_coding	Nudt3	ENSMUST00000114886	protein_coding		17	-1	27622964	996
ENSMUSG00000022099	protein_coding	Dmtn	ENSMUST00000228001	protein_coding		14	-1	70618545	2437
ENSMUSG00000078162	processed_pseudogene	Gm2574	ENSMUST00000181051	processed_pseudogene		3	1	142962611	1002
ENSMUSG00000046062	protein_coding	Ppp1r15b	ENSMUST00000052529	protein_coding	principal1	1	1	133131143	5594
ENSMUSG00000024213	protein_coding	Nudt3	ENSMUST00000133048	retained_intron		17	-1	27583319	443
ENSMUSG00000051050	protein_coding	Spink14	ENSMUST00000162265	protein_coding	principal1	18	1	44028694	542
ENSMUSG00000081263	processed_pseudogene	Gm14859	ENSMUST00000117752	processed_pseudogene		X	1	102208402	357
ENSMUSG00000024213	protein_coding	Nudt3	ENSMUST00000156429	protein_coding		17	-1	27622393	495
ENSMUSG00000022099	protein_coding	Dmtn	ENSMUST00000228009	protein_coding	principal2	14	-1	70630154	2643
ENSMUSG00000046062	protein_coding	Ppp1r15b	ENSMUST00000122956	processed_transcript		1	1	133131344	3688
ENSMUSG00000051050	protein_coding	Spink14	ENSMUST00000060328	protein_coding	principal1	18	1	44027869	566
ENSMUSG00000022099	protein_coding	Dmtn	ENSMUST00000228824	protein_coding		14	-1	70628999	2377
ENSMUSG00000024213	protein_coding	Nudt3	ENSMUST00000062397	protein_coding		17	-1	27623263	558
ENSMUSG00000024213	protein_coding	Nudt3	ENSMUST00000176876	protein_coding		17	-1	27623263	465
ENSMUSG00000022099	protein_coding	Dmtn	ENSMUST00000227331	nonsense_mediated_decay		14	-1	70617392	622
ENSMUSG00000033970	protein_coding	Rfc3	ENSMUST00000145106	retained_intron		5	-1	151651202	2726
ENSMUSG00000016255	protein_coding	Tubb1	ENSMUST00000016399	protein_coding	principal1	2	1	174450695	1406
ENSMUSG00000024213	protein_coding	Nudt3	ENSMUST00000127236	processed_transcript		17	-1	27611668	366
ENSMUSG00000022099	protein_coding	Dmtn	ENSMUST00000227453	retained_intron		14	-1	70617736	4167
ENSMUSG00000046856	protein_coding	Gpr1	ENSMUST00000050536	protein_coding	principal1	1	-1	63214543	1940
ENSMUSG00000024213	protein_coding	Nudt3	ENSMUST00000176458	protein_coding		17	-1	27622844	424
ENSMUSG00000022099	protein_coding	Dmtn	ENSMUST00000226543	protein_coding		14	-1	70626155	355
ENSMUSG00000033970	protein_coding	Rfc3	ENSMUST00000140067	retained_intron		5	-1	151651208	1062
ENSMUSG00000029229	protein_coding	Chic2	ENSMUST00000075452	protein_coding	principal1	5	-1	75044774	9699
ENSMUSG00000024213	protein_coding	Nudt3	ENSMUST00000146321	protein_coding		17	-1	27623263	1866
ENSMUSG00000022723	protein_coding	Crybg3	ENSMUST00000172910	protein_coding	principal5	16	-1	59600979	10454
ENSMUSG00000027474	protein_coding	Ccm2l	ENSMUST00000127898	nonsense_mediated_decay		2	1	153065955	2271
ENSMUSG00000117263	antisense	Gm35290	ENSMUST00000233367	antisense		17	-1	28002362	1298
ENSMUSG00000118451	lincRNA	Gm17584	ENSMUST00000238621	lincRNA		X	1	124500557	174
ENSMUSG00000046856	protein_coding	Gpr1	ENSMUST00000187533	processed_transcript		1	-1	63214223	762
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000138049	protein_coding		8	1	45507795	1939
ENSMUSG00000033970	protein_coding	Rfc3	ENSMUST00000132709	retained_intron		5	-1	151651195	906
ENSMUSG00000118451	lincRNA	Gm17584	ENSMUST00000238566	lincRNA		X	1	124500563	499
ENSMUSG00000022723	protein_coding	Crybg3	ENSMUST00000232544	protein_coding		16	-1	59530191	760
ENSMUSG00000086730	processed_transcript	Platr12	ENSMUST00000141027	antisense		1	1	63200313	462
ENSMUSG00000118451	lincRNA	Gm17584	ENSMUST00000238479	lincRNA		X	1	124500563	498
ENSMUSG00000033970	protein_coding	Rfc3	ENSMUST00000136752	retained_intron		5	-1	151651227	605
ENSMUSG00000029229	protein_coding	Chic2	ENSMUST00000162397	retained_intron		5	-1	75044321	521
ENSMUSG00000086730	processed_transcript	Platr12	ENSMUST00000189722	lincRNA		1	1	63200708	549
ENSMUSG00000022099	protein_coding	Dmtn	ENSMUST00000022695	protein_coding		14	-1	70636048	4080
ENSMUSG00000107205	TEC	Gm42576	ENSMUST00000202336	TEC		5	-1	75023081	2846
ENSMUSG00000022723	protein_coding	Crybg3	ENSMUST00000129350	processed_transcript		16	-1	59539880	543
ENSMUSG00000105582	IG_V_pseudogene	Ighv1-68	ENSMUST00000198789	IG_V_pseudogene		12	-1	115611633	294
ENSMUSG00000022723	protein_coding	Crybg3	ENSMUST00000139989	processed_transcript		16	-1	59553970	670
ENSMUSG00000106420	processed_pseudogene	Gm9245	ENSMUST00000200528	processed_pseudogene		12	1	115616807	983
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000202527	protein_coding		15	1	100869858	533
ENSMUSG00000106077	processed_pseudogene	Gm5660	ENSMUST00000197453	processed_pseudogene		12	1	115615673	1149
ENSMUSG00000027300	protein_coding	Ubox5	ENSMUST00000028761	protein_coding	principal1	2	-1	130630038	3731
ENSMUSG00000102536	TEC	1700039I01Rik	ENSMUST00000194370	TEC		1	-1	63248499	479
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000201484	protein_coding		15	1	100869858	683
ENSMUSG00000022723	protein_coding	Crybg3	ENSMUST00000044604	protein_coding	alternative2	16	-1	59555752	6544
ENSMUSG00000060560	protein_coding	Ces4a	ENSMUST00000161289	protein_coding	principal1	8	1	105131800	2433
ENSMUSG00000027474	protein_coding	Ccm2l	ENSMUST00000238488	protein_coding	principal1	2	1	153065955	2269
ENSMUSG00000016252	protein_coding	Atp5e	ENSMUST00000016396	protein_coding	principal1	2	-1	174464105	421
ENSMUSG00000104238	processed_transcript	Gm37587	ENSMUST00000193450	retained_intron		1	1	4496551	2828
ENSMUSG00000093756	processed_pseudogene	Gm18594	ENSMUST00000175733	processed_pseudogene		5	1	108821721	1403
ENSMUSG00000016252	protein_coding	Atp5e	ENSMUST00000149191	retained_intron		2	-1	174464049	1697
ENSMUSG00000027300	protein_coding	Ubox5	ENSMUST00000140581	nonsense_mediated_decay		2	-1	130630027	3131
ENSMUSG00000016252	protein_coding	Atp5e	ENSMUST00000153132	retained_intron		2	-1	174464089	402
ENSMUSG00000104238	processed_transcript	Gm37587	ENSMUST00000194935	antisense		1	1	4497474	475
ENSMUSG00000079299	protein_coding	Klrb1	ENSMUST00000203869	processed_transcript		6	-1	128707801	870
ENSMUSG00000080719	processed_pseudogene	Gm15532	ENSMUST00000121192	processed_pseudogene		6	1	119892920	884
ENSMUSG00000027474	protein_coding	Ccm2l	ENSMUST00000127549	processed_transcript		2	1	153065984	627
ENSMUSG00000027474	protein_coding	Ccm2l	ENSMUST00000129377	protein_coding		2	1	153065998	417
ENSMUSG00000079043	protein_coding	Fastkd5	ENSMUST00000110262	protein_coding	alternative2	2	-1	130630027	3015
ENSMUSG00000079043	protein_coding	Fastkd5	ENSMUST00000179273	protein_coding	principal2	2	-1	130616668	2424
ENSMUSG00000096318	lincRNA	Astx4a	ENSMUST00000177683	lincRNA		X	1	124530162	1149
ENSMUSG00000093990	processed_pseudogene	Rps12-ps12	ENSMUST00000179020	processed_pseudogene		X	-1	124599762	399
ENSMUSG00000027474	protein_coding	Ccm2l	ENSMUST00000109800	protein_coding		2	1	153066002	2158
ENSMUSG00000118453	lincRNA	Gm17469	ENSMUST00000238780	lincRNA		X	1	124629887	505
ENSMUSG00000093510	unprocessed_pseudogene	Vmn2r-ps21	ENSMUST00000177115	unprocessed_pseudogene		5	-1	108892380	2947
ENSMUSG00000118453	lincRNA	Gm17469	ENSMUST00000238326	lincRNA		X	1	124629887	174
ENSMUSG00000118453	lincRNA	Gm17469	ENSMUST00000238349	lincRNA		X	1	124629893	498
ENSMUSG00000093479	antisense	Gm20629	ENSMUST00000176157	antisense		5	1	108849781	513
ENSMUSG00000085126	lincRNA	Gm12589	ENSMUST00000153767	lincRNA		11	1	121803107	638
ENSMUSG00000094675	lincRNA	Astx4b	ENSMUST00000179359	lincRNA		X	1	124659500	1149
ENSMUSG00000025902	protein_coding	Sox17	ENSMUST00000027035	protein_coding	principal1	1	-1	4496413	3127
ENSMUSG00000076906	TR_J_gene	Traj23	ENSMUST00000103718	TR_J_gene	principal1	14	1	54196081	60
ENSMUSG00000099690	lincRNA	Gm29513	ENSMUST00000185741	lincRNA		11	1	121817408	202
ENSMUSG00000022586	protein_coding	Ly6i	ENSMUST00000023250	protein_coding	principal1	15	-1	74983430	1156
ENSMUSG00000021779	protein_coding	Thrb	ENSMUST00000091471	protein_coding	alternative1	14	1	17660896	1758
ENSMUSG00000025902	protein_coding	Sox17	ENSMUST00000195555	protein_coding		1	-1	4496757	1977
ENSMUSG00000076907	TR_J_gene	Traj22	ENSMUST00000103719	TR_J_gene	principal1	14	1	54197248	60
ENSMUSG00000024142	protein_coding	Mlst8	ENSMUST00000234941	protein_coding		17	-1	24479055	3223
ENSMUSG00000091624	protein_coding	Vmn2r9	ENSMUST00000233198	nonsense_mediated_decay		5	-1	108852601	7902
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000124737	protein_coding		2	-1	73845505	3151
ENSMUSG00000091624	protein_coding	Vmn2r9	ENSMUST00000233547	nonsense_mediated_decay		5	-1	108852601	7839
ENSMUSG00000025902	protein_coding	Sox17	ENSMUST00000192650	protein_coding		1	-1	4497354	3242
ENSMUSG00000022586	protein_coding	Ly6i	ENSMUST00000166694	protein_coding	principal1	15	-1	74983430	620
ENSMUSG00000091624	protein_coding	Vmn2r9	ENSMUST00000170419	protein_coding	principal2	5	-1	108852601	10299
ENSMUSG00000079299	protein_coding	Klrb1	ENSMUST00000112110	protein_coding	principal1	6	-1	128723059	724
ENSMUSG00000021779	protein_coding	Thrb	ENSMUST00000022303	protein_coding	alternative1	14	1	17660896	4532
ENSMUSG00000091624	protein_coding	Vmn2r9	ENSMUST00000233835	protein_coding	alternative2	5	-1	108852601	10236
ENSMUSG00000032293	protein_coding	Ireb2	ENSMUST00000034843	protein_coding	principal1	9	1	54863789	5770
ENSMUSG00000101132	unprocessed_pseudogene	Gm8000	ENSMUST00000188378	unprocessed_pseudogene		15	-1	74988460	592
ENSMUSG00000025902	protein_coding	Sox17	ENSMUST00000116652	protein_coding	principal1	1	-1	4496363	1512
ENSMUSG00000103580	TEC	Gm10417	ENSMUST00000194341	TEC		5	1	108864833	3522
ENSMUSG00000027963	protein_coding	Extl2	ENSMUST00000029575	protein_coding	principal3	3	1	116007462	3000
ENSMUSG00000103457	TEC	Gm37042	ENSMUST00000193816	TEC		15	1	74988750	581
ENSMUSG00000105808	processed_pseudogene	Gm42627	ENSMUST00000197347	processed_pseudogene		5	1	108903226	224
ENSMUSG00000021779	protein_coding	Thrb	ENSMUST00000224934	protein_coding		14	1	17962821	790
ENSMUSG00000087561	lincRNA	Gm11608	ENSMUST00000153049	lincRNA		1	-1	63273115	877
ENSMUSG00000114102	processed_pseudogene	Gm48048	ENSMUST00000222878	processed_pseudogene		12	-1	108737626	486
ENSMUSG00000087561	lincRNA	Gm11608	ENSMUST00000151616	lincRNA		1	-1	63273120	751
ENSMUSG00000032293	protein_coding	Ireb2	ENSMUST00000214023	protein_coding		9	1	54897473	674
ENSMUSG00000025902	protein_coding	Sox17	ENSMUST00000192505	retained_intron		1	-1	4493604	1148
ENSMUSG00000032293	protein_coding	Ireb2	ENSMUST00000213482	retained_intron		9	1	54902205	3943
ENSMUSG00000048782	protein_coding	Insc	ENSMUST00000117543	protein_coding	principal1	7	1	114768736	2170
ENSMUSG00000025902	protein_coding	Sox17	ENSMUST00000191647	protein_coding		1	-1	4496330	406
ENSMUSG00000099465	lincRNA	Gm3830	ENSMUST00000185540	lincRNA		8	1	105164587	1715
ENSMUSG00000094502	IG_V_gene	Ighv1-69	ENSMUST00000199933	IG_V_gene	principal5	12	-1	115623595	351
ENSMUSG00000025902	protein_coding	Sox17	ENSMUST00000191939	protein_coding		1	-1	4493735	840
ENSMUSG00000094502	IG_V_gene	Ighv1-69	ENSMUST00000103539	IG_V_gene	alternative2	12	-1	115623595	348
ENSMUSG00000048782	protein_coding	Insc	ENSMUST00000151464	protein_coding		7	1	114768774	363
ENSMUSG00000105652	lincRNA	4930519L02Rik	ENSMUST00000200254	lincRNA		3	1	143017660	452
ENSMUSG00000097831	lincRNA	4930540M05Rik	ENSMUST00000180527	lincRNA		6	-1	119902653	2068
ENSMUSG00000107866	processed_pseudogene	Gm43907	ENSMUST00000203128	processed_pseudogene		6	1	128744644	117
ENSMUSG00000054520	protein_coding	Sh3bp2	ENSMUST00000067638	protein_coding	principal3	5	1	34525846	2885
ENSMUSG00000025902	protein_coding	Sox17	ENSMUST00000192913	protein_coding		1	-1	4496396	1506
ENSMUSG00000105652	lincRNA	4930519L02Rik	ENSMUST00000197683	lincRNA		3	1	143030614	619
ENSMUSG00000021779	protein_coding	Thrb	ENSMUST00000022304	protein_coding	principal3	14	1	17981529	6200
ENSMUSG00000027963	protein_coding	Extl2	ENSMUST00000106501	protein_coding	alternative2	3	1	116007478	2887
ENSMUSG00000048782	protein_coding	Insc	ENSMUST00000136347	processed_transcript		7	1	114771321	439
ENSMUSG00000112971	lincRNA	Gm33682	ENSMUST00000222233	lincRNA		12	-1	108762970	256
ENSMUSG00000114281	processed_pseudogene	Gm48320	ENSMUST00000225878	processed_pseudogene		14	-1	17771122	474
ENSMUSG00000114045	TEC	Gm34220	ENSMUST00000223001	TEC		12	-1	108792743	2709
ENSMUSG00000106052	lincRNA	Gm43614	ENSMUST00000197030	lincRNA		3	1	143107948	517
ENSMUSG00000076731	IG_V_gene	Ighv8-12	ENSMUST00000199266	IG_V_gene		12	-1	115648387	358
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000106603	protein_coding		4	-1	110351909	3761
ENSMUSG00000027963	protein_coding	Extl2	ENSMUST00000128228	processed_transcript		3	1	116007485	534
ENSMUSG00000076731	IG_V_gene	Ighv8-12	ENSMUST00000103540	IG_V_gene	principal1	12	-1	115648361	315
ENSMUSG00000114504	antisense	Gm48321	ENSMUST00000225876	antisense		14	-1	18021901	1735
ENSMUSG00000114504	antisense	Gm48321	ENSMUST00000224512	antisense		14	-1	18021909	517
ENSMUSG00000105737	processed_pseudogene	Gm6105	ENSMUST00000200580	processed_pseudogene		12	1	115659013	624
ENSMUSG00000027963	protein_coding	Extl2	ENSMUST00000145945	processed_transcript		3	1	116007523	642
ENSMUSG00000105923	lincRNA	A830019L24Rik	ENSMUST00000197226	lincRNA		3	1	143243055	1652
ENSMUSG00000108559	unprocessed_pseudogene	Gm44782	ENSMUST00000205482	unprocessed_pseudogene		12	1	115688840	50
ENSMUSG00000105923	lincRNA	A830019L24Rik	ENSMUST00000198056	lincRNA		3	1	143243528	3165
ENSMUSG00000027963	protein_coding	Extl2	ENSMUST00000149920	processed_transcript		3	1	116007828	159
ENSMUSG00000087322	antisense	Gm16075	ENSMUST00000135873	antisense		11	1	75860969	361
ENSMUSG00000106162	lincRNA	Gm43613	ENSMUST00000199409	lincRNA		3	1	143330420	1613
ENSMUSG00000086075	lincRNA	Gm15728	ENSMUST00000140833	lincRNA		5	1	117389139	3492
ENSMUSG00000105917	lincRNA	Gm43612	ENSMUST00000196087	lincRNA		3	1	143368576	3207
ENSMUSG00000037703	protein_coding	Lzts3	ENSMUST00000089561	protein_coding	principal3	2	-1	130638095	4169
ENSMUSG00000030223	protein_coding	Ptpro	ENSMUST00000167679	protein_coding	alternative2	6	1	137252334	5096
ENSMUSG00000039512	protein_coding	Uhrf1bp1	ENSMUST00000114849	protein_coding	principal1	17	1	27856441	8634
ENSMUSG00000086075	lincRNA	Gm15728	ENSMUST00000156391	lincRNA		5	1	117389215	571
ENSMUSG00000043664	protein_coding	Tmem221	ENSMUST00000052072	protein_coding	principal1	8	-1	71558871	1604
ENSMUSG00000037703	protein_coding	Lzts3	ENSMUST00000110260	protein_coding	alternative2	2	-1	130638095	3827
ENSMUSG00000106210	lincRNA	1700001N15Rik	ENSMUST00000199380	lincRNA		3	1	143409401	482
ENSMUSG00000112744	TEC	Gm48880	ENSMUST00000219461	TEC		10	-1	95314853	1984
ENSMUSG00000027381	protein_coding	Bcl2l11	ENSMUST00000110341	protein_coding	principal4	2	1	128126039	5036
ENSMUSG00000106601	IG_V_pseudogene	Ighv1-70	ENSMUST00000196509	IG_V_pseudogene		12	-1	115692322	351
ENSMUSG00000054520	protein_coding	Sh3bp2	ENSMUST00000138912	nonsense_mediated_decay		5	1	34543365	431
ENSMUSG00000031949	protein_coding	Adat1	ENSMUST00000034427	protein_coding	principal1	8	-1	111992302	3159
ENSMUSG00000117693	processed_pseudogene	Gm50272	ENSMUST00000235418	processed_pseudogene		19	1	53883367	402
ENSMUSG00000048782	protein_coding	Insc	ENSMUST00000150991	retained_intron		7	1	114792053	1826
ENSMUSG00000054520	protein_coding	Sh3bp2	ENSMUST00000153750	retained_intron		5	1	34543365	1481
ENSMUSG00000027963	protein_coding	Extl2	ENSMUST00000106502	protein_coding	principal3	3	1	116008220	2840
ENSMUSG00000031949	protein_coding	Adat1	ENSMUST00000139820	protein_coding		8	-1	111992302	2762
ENSMUSG00000024142	protein_coding	Mlst8	ENSMUST00000179163	protein_coding	principal1	17	-1	24479078	3340
ENSMUSG00000048782	protein_coding	Insc	ENSMUST00000206274	protein_coding		7	1	114793968	405
ENSMUSG00000031949	protein_coding	Adat1	ENSMUST00000120457	protein_coding		8	-1	111990412	1677
ENSMUSG00000037703	protein_coding	Lzts3	ENSMUST00000045761	protein_coding	principal3	2	-1	130642803	4201
ENSMUSG00000048782	protein_coding	Insc	ENSMUST00000169913	protein_coding	principal1	7	1	114745766	2321
ENSMUSG00000101400	processed_pseudogene	Gm29596	ENSMUST00000185710	processed_pseudogene		1	1	59673241	385
ENSMUSG00000027381	protein_coding	Bcl2l11	ENSMUST00000146023	processed_transcript		2	1	128126038	1611
ENSMUSG00000107162	processed_pseudogene	Gm18593	ENSMUST00000200754	processed_pseudogene		5	1	75048479	1139
ENSMUSG00000113231	processed_pseudogene	Gm5189	ENSMUST00000221796	processed_pseudogene		12	-1	112751531	261
ENSMUSG00000097939	processed_pseudogene	Gm8601	ENSMUST00000182096	processed_pseudogene		10	1	96476479	909
ENSMUSG00000045867	protein_coding	Cradd	ENSMUST00000220279	protein_coding	principal1	10	-1	95322965	1613
ENSMUSG00000039512	protein_coding	Uhrf1bp1	ENSMUST00000233809	protein_coding		17	1	27856606	548
ENSMUSG00000029134	protein_coding	Plb1	ENSMUST00000202886	retained_intron		5	1	32232708	3147
ENSMUSG00000112264	lincRNA	Gm48505	ENSMUST00000219016	lincRNA		10	-1	96523982	2031
ENSMUSG00000024142	protein_coding	Mlst8	ENSMUST00000070888	protein_coding	principal1	17	-1	24479078	3358
ENSMUSG00000033722	protein_coding	BC034090	ENSMUST00000185937	retained_intron		1	-1	155213981	1511
ENSMUSG00000029134	protein_coding	Plb1	ENSMUST00000201578	retained_intron		5	1	32232710	2883
ENSMUSG00000112354	lincRNA	Gm33843	ENSMUST00000219313	lincRNA		10	-1	96595731	1637
ENSMUSG00000086548	lincRNA	Gm12972	ENSMUST00000152986	lincRNA		4	1	130786069	1006
ENSMUSG00000039512	protein_coding	Uhrf1bp1	ENSMUST00000130810	protein_coding		17	1	27857243	657
ENSMUSG00000026496	protein_coding	Parp1	ENSMUST00000027777	protein_coding	principal1	1	1	180568929	3873
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000236456	nonsense_mediated_decay		19	-1	53038641	2216
ENSMUSG00000024142	protein_coding	Mlst8	ENSMUST00000234686	protein_coding	principal1	17	-1	24479043	3855
ENSMUSG00000030223	protein_coding	Ptpro	ENSMUST00000077115	protein_coding	principal3	6	1	137252465	5049
ENSMUSG00000039512	protein_coding	Uhrf1bp1	ENSMUST00000137825	nonsense_mediated_decay		17	1	27890105	817
ENSMUSG00000034829	protein_coding	Nxnl1	ENSMUST00000163659	protein_coding	principal1	8	-1	71566601	2730
ENSMUSG00000039512	protein_coding	Uhrf1bp1	ENSMUST00000233409	protein_coding		17	1	27894695	594
ENSMUSG00000074649	protein_coding	BC029722	ENSMUST00000124586	protein_coding	principal1	2	-1	155819426	1615
ENSMUSG00000029134	protein_coding	Plb1	ENSMUST00000200878	processed_transcript		5	1	32232710	440
ENSMUSG00000026496	protein_coding	Parp1	ENSMUST00000194434	protein_coding		1	1	180569226	356
ENSMUSG00000045867	protein_coding	Cradd	ENSMUST00000053594	protein_coding	principal1	10	-1	95324108	1661
ENSMUSG00000032013	protein_coding	Trim29	ENSMUST00000034511	protein_coding	principal1	9	1	43310848	2735
ENSMUSG00000034829	protein_coding	Nxnl1	ENSMUST00000048243	protein_coding	principal1	8	-1	71566601	2285
ENSMUSG00000026496	protein_coding	Parp1	ENSMUST00000191639	retained_intron		1	1	180589467	560
ENSMUSG00000026496	protein_coding	Parp1	ENSMUST00000192411	retained_intron		1	1	180591283	553
ENSMUSG00000024142	protein_coding	Mlst8	ENSMUST00000234543	protein_coding		17	-1	24479060	3127
ENSMUSG00000045867	protein_coding	Cradd	ENSMUST00000217809	protein_coding	principal1	10	-1	95323565	1115
ENSMUSG00000032013	protein_coding	Trim29	ENSMUST00000217418	processed_transcript		9	1	43318959	323
ENSMUSG00000026496	protein_coding	Parp1	ENSMUST00000193238	retained_intron		1	1	180598225	871
ENSMUSG00000032013	protein_coding	Trim29	ENSMUST00000217067	retained_intron		9	1	43328995	904
ENSMUSG00000026496	protein_coding	Parp1	ENSMUST00000191833	retained_intron		1	1	180598836	759
ENSMUSG00000085970	antisense	Gm15643	ENSMUST00000126556	antisense		11	-1	121830103	383
ENSMUSG00000045867	protein_coding	Cradd	ENSMUST00000218761	processed_transcript		10	-1	95324001	2663
ENSMUSG00000022724	protein_coding	Riox2	ENSMUST00000023407	protein_coding	principal1	16	1	59471775	2159
ENSMUSG00000036478	protein_coding	Btg1	ENSMUST00000038377	protein_coding	principal1	10	1	96617006	5001
ENSMUSG00000028640	protein_coding	Tfap2c	ENSMUST00000030391	protein_coding	principal1	2	1	172549593	2838
ENSMUSG00000082941	processed_pseudogene	Gm12850	ENSMUST00000119210	processed_pseudogene		4	1	107270434	436
ENSMUSG00000045867	protein_coding	Cradd	ENSMUST00000218651	processed_transcript		10	-1	95324133	679
ENSMUSG00000026496	protein_coding	Parp1	ENSMUST00000195560	protein_coding		1	1	180598988	476
ENSMUSG00000045867	protein_coding	Cradd	ENSMUST00000220446	processed_transcript		10	-1	95323687	717
ENSMUSG00000076908	TR_J_gene	Traj21	ENSMUST00000103720	TR_J_gene	principal1	14	1	54198790	57
ENSMUSG00000024142	protein_coding	Mlst8	ENSMUST00000234335	protein_coding	principal1	17	-1	24479038	1574
ENSMUSG00000024218	protein_coding	Taf11	ENSMUST00000114848	protein_coding	principal1	17	-1	27909242	2207
ENSMUSG00000112593	antisense	Gm48882	ENSMUST00000218132	antisense		10	1	95318247	1056
ENSMUSG00000022724	protein_coding	Riox2	ENSMUST00000120667	protein_coding		16	1	59471804	2200
ENSMUSG00000024218	protein_coding	Taf11	ENSMUST00000233106	retained_intron		17	-1	27903339	1478
ENSMUSG00000036478	protein_coding	Btg1	ENSMUST00000218953	protein_coding		10	1	96617554	668
ENSMUSG00000054520	protein_coding	Sh3bp2	ENSMUST00000101316	protein_coding	alternative2	5	1	34543365	3031
ENSMUSG00000076909	TR_J_gene	Traj20	ENSMUST00000103721	TR_J_gene	principal1	14	1	54199441	58
ENSMUSG00000022724	protein_coding	Riox2	ENSMUST00000120674	protein_coding		16	1	59471822	1753
ENSMUSG00000024142	protein_coding	Mlst8	ENSMUST00000234147	protein_coding		17	-1	24478261	850
ENSMUSG00000024218	protein_coding	Taf11	ENSMUST00000233439	nonsense_mediated_decay		17	-1	27909844	3457
ENSMUSG00000027520	protein_coding	Zdbf2	ENSMUST00000239483	protein_coding	principal1	1	1	63273265	12523
ENSMUSG00000108683	lincRNA	Gm45017	ENSMUST00000206842	lincRNA		7	-1	114854571	1777
ENSMUSG00000024218	protein_coding	Taf11	ENSMUST00000155667	retained_intron		17	-1	27903271	396
ENSMUSG00000051159	protein_coding	Cited1	ENSMUST00000050551	protein_coding	principal1	X	-1	102252181	901
ENSMUSG00000022724	protein_coding	Riox2	ENSMUST00000160571	protein_coding	principal1	16	1	59472068	2244
ENSMUSG00000024218	protein_coding	Taf11	ENSMUST00000232820	processed_transcript		17	-1	27903485	165
ENSMUSG00000024218	protein_coding	Taf11	ENSMUST00000233306	retained_intron		17	-1	27907735	1496
ENSMUSG00000054520	protein_coding	Sh3bp2	ENSMUST00000118545	protein_coding	alternative2	5	1	34549576	3034
ENSMUSG00000027520	protein_coding	Zdbf2	ENSMUST00000114132	protein_coding		1	1	63273265	12629
ENSMUSG00000022724	protein_coding	Riox2	ENSMUST00000138324	protein_coding		16	1	59472343	804
ENSMUSG00000050612	protein_coding	Txndc2	ENSMUST00000050236	protein_coding	principal2	17	-1	65642168	1861
ENSMUSG00000028640	protein_coding	Tfap2c	ENSMUST00000128406	processed_transcript		2	1	172550653	2724
ENSMUSG00000024142	protein_coding	Mlst8	ENSMUST00000234892	retained_intron		17	-1	24477920	519
ENSMUSG00000028640	protein_coding	Tfap2c	ENSMUST00000122982	processed_transcript		2	1	172550764	1959
ENSMUSG00000022724	protein_coding	Riox2	ENSMUST00000131272	retained_intron		16	1	59487537	392
ENSMUSG00000027520	protein_coding	Zdbf2	ENSMUST00000126932	protein_coding		1	1	63273269	611
ENSMUSG00000054520	protein_coding	Sh3bp2	ENSMUST00000202745	retained_intron		5	1	34551545	212
ENSMUSG00000024218	protein_coding	Taf11	ENSMUST00000233681	processed_transcript		17	-1	27909139	805
ENSMUSG00000020847	protein_coding	Rph3al	ENSMUST00000121287	protein_coding	principal1	11	-1	75937738	2199
ENSMUSG00000027520	protein_coding	Zdbf2	ENSMUST00000029025	protein_coding		1	1	63290738	12112
ENSMUSG00000027219	protein_coding	Slc28a2	ENSMUST00000110525	protein_coding	principal1	2	1	122426477	3911
ENSMUSG00000050612	protein_coding	Txndc2	ENSMUST00000233702	protein_coding	alternative2	17	-1	65639826	1788
ENSMUSG00000024142	protein_coding	Mlst8	ENSMUST00000234516	nonsense_mediated_decay		17	-1	24479047	786
ENSMUSG00000024218	protein_coding	Taf11	ENSMUST00000025057	protein_coding	principal1	17	-1	27907724	1220
ENSMUSG00000033722	protein_coding	BC034090	ENSMUST00000186156	protein_coding	principal5	1	-1	155244444	4873
ENSMUSG00000054520	protein_coding	Sh3bp2	ENSMUST00000179943	protein_coding	principal3	5	1	34549688	2935
ENSMUSG00000024142	protein_coding	Mlst8	ENSMUST00000234032	retained_intron		17	-1	24478478	668
ENSMUSG00000028640	protein_coding	Tfap2c	ENSMUST00000099058	protein_coding		2	1	172550782	2985
ENSMUSG00000020847	protein_coding	Rph3al	ENSMUST00000021208	protein_coding		11	-1	75925891	1690
ENSMUSG00000051159	protein_coding	Cited1	ENSMUST00000101336	protein_coding	principal1	X	-1	102251852	1090
ENSMUSG00000028640	protein_coding	Tfap2c	ENSMUST00000142633	processed_transcript		2	1	172552116	375
ENSMUSG00000033722	protein_coding	BC034090	ENSMUST00000035914	protein_coding	alternative2	1	-1	155232740	3797
ENSMUSG00000096577	IG_V_gene	Ighv1-71	ENSMUST00000196690	IG_V_gene		12	-1	115742647	359
ENSMUSG00000020847	protein_coding	Rph3al	ENSMUST00000108420	protein_coding		11	-1	75937697	695
ENSMUSG00000027219	protein_coding	Slc28a2	ENSMUST00000110524	protein_coding	principal1	2	1	122440763	2836
ENSMUSG00000028640	protein_coding	Tfap2c	ENSMUST00000170744	protein_coding		2	1	172550991	2776
ENSMUSG00000020847	protein_coding	Rph3al	ENSMUST00000152035	protein_coding		11	-1	75938429	511
ENSMUSG00000051159	protein_coding	Cited1	ENSMUST00000134887	protein_coding		X	-1	102250946	607
ENSMUSG00000027219	protein_coding	Slc28a2	ENSMUST00000139850	processed_transcript		2	1	122426494	351
ENSMUSG00000030223	protein_coding	Ptpro	ENSMUST00000167002	protein_coding	alternative2	6	1	137410721	2767
ENSMUSG00000033722	protein_coding	BC034090	ENSMUST00000190976	processed_transcript		1	-1	155225425	689
ENSMUSG00000027612	protein_coding	Mmp24	ENSMUST00000029141	protein_coding	principal1	2	1	155775342	4306
ENSMUSG00000096577	IG_V_gene	Ighv1-71	ENSMUST00000166645	IG_V_gene	principal1	12	-1	115742506	302
ENSMUSG00000081681	processed_pseudogene	Gm14868	ENSMUST00000117840	processed_pseudogene		X	-1	109280400	216
ENSMUSG00000040659	protein_coding	Efhd2	ENSMUST00000036854	protein_coding	principal1	4	-1	141874920	2381
ENSMUSG00000051159	protein_coding	Cited1	ENSMUST00000130589	protein_coding		X	-1	102250775	576
ENSMUSG00000020847	protein_coding	Rph3al	ENSMUST00000066504	protein_coding	principal1	11	-1	75911062	988
ENSMUSG00000051159	protein_coding	Cited1	ENSMUST00000136277	protein_coding		X	-1	102251918	307
ENSMUSG00000026632	protein_coding	Tatdn3	ENSMUST00000110893	protein_coding	principal2	1	-1	191062932	1242
ENSMUSG00000030223	protein_coding	Ptpro	ENSMUST00000203914	protein_coding	alternative2	6	1	137410737	2667
ENSMUSG00000033722	protein_coding	BC034090	ENSMUST00000186551	processed_transcript		1	-1	155225174	634
ENSMUSG00000027612	protein_coding	Mmp24	ENSMUST00000135945	retained_intron		2	1	155807024	647
ENSMUSG00000105193	processed_pseudogene	Gm18971	ENSMUST00000197240	processed_pseudogene		5	1	108971677	374
ENSMUSG00000027219	protein_coding	Slc28a2	ENSMUST00000153848	processed_transcript		2	1	122456399	537
ENSMUSG00000033722	protein_coding	BC034090	ENSMUST00000187781	processed_transcript		1	-1	155229894	835
ENSMUSG00000030223	protein_coding	Ptpro	ENSMUST00000204780	processed_transcript		6	1	137410759	423
ENSMUSG00000063047	protein_coding	Zfp780b	ENSMUST00000205874	protein_coding		7	-1	27979139	1907
ENSMUSG00000082189	processed_pseudogene	Gm4784	ENSMUST00000117365	processed_pseudogene		X	-1	109392165	1824
ENSMUSG00000114744	lincRNA	Gm38409	ENSMUST00000223991	lincRNA		14	1	67476873	2151
ENSMUSG00000093725	processed_pseudogene	Gm18595	ENSMUST00000175736	processed_pseudogene		5	1	108972797	1068
ENSMUSG00000033722	protein_coding	BC034090	ENSMUST00000187096	protein_coding		1	-1	155232911	585
ENSMUSG00000114514	processed_pseudogene	Gm47010	ENSMUST00000224499	processed_pseudogene		14	-1	67588792	430
ENSMUSG00000063047	protein_coding	Zfp780b	ENSMUST00000206685	protein_coding	principal1	7	-1	27979147	3940
ENSMUSG00000023153	protein_coding	Tmem52	ENSMUST00000131599	retained_intron		4	1	155469114	622
ENSMUSG00000033722	protein_coding	BC034090	ENSMUST00000186082	retained_intron		1	-1	155240906	630
ENSMUSG00000027219	protein_coding	Slc28a2	ENSMUST00000028652	protein_coding	principal1	2	1	122439747	3852
ENSMUSG00000030223	protein_coding	Ptpro	ENSMUST00000203255	processed_transcript		6	1	137452695	568
ENSMUSG00000033722	protein_coding	BC034090	ENSMUST00000188492	retained_intron		1	-1	155231904	2791
ENSMUSG00000063047	protein_coding	Zfp780b	ENSMUST00000205431	retained_intron		7	-1	27979171	3354
ENSMUSG00000104939	lincRNA	Gm33651	ENSMUST00000200405	lincRNA		3	1	143576614	456
ENSMUSG00000104093	antisense	A330015K06Rik	ENSMUST00000195685	antisense		3	-1	65302685	2196
ENSMUSG00000030223	protein_coding	Ptpro	ENSMUST00000203127	processed_transcript		6	1	137454028	817
ENSMUSG00000083645	unprocessed_pseudogene	Gm14086	ENSMUST00000117152	unprocessed_pseudogene		2	1	122427194	173
ENSMUSG00000103670	antisense	Gm37622	ENSMUST00000192162	antisense		1	1	155231304	285
ENSMUSG00000063047	protein_coding	Zfp780b	ENSMUST00000207098	retained_intron		7	-1	27975368	989
ENSMUSG00000105000	lincRNA	Gm43616	ENSMUST00000199347	lincRNA		3	-1	143577001	409
ENSMUSG00000104093	antisense	A330015K06Rik	ENSMUST00000195489	antisense		3	-1	65302657	4286
ENSMUSG00000063047	protein_coding	Zfp780b	ENSMUST00000081618	protein_coding	principal1	7	-1	27975368	3004
ENSMUSG00000094401	processed_pseudogene	Gm14365	ENSMUST00000117535	processed_pseudogene		X	1	5193483	587
ENSMUSG00000067010	protein_coding	Vmn2r10	ENSMUST00000176594	nonsense_mediated_decay		5	-1	109006527	7302
ENSMUSG00000045104	processed_pseudogene	Ldhb-ps	ENSMUST00000060477	processed_pseudogene		19	1	21937380	1002
ENSMUSG00000022157	protein_coding	Mcpt8	ENSMUST00000015594	protein_coding	principal1	14	-1	56085197	836
ENSMUSG00000085706	processed_pseudogene	Gm9428	ENSMUST00000127214	processed_pseudogene		X	-1	5278427	769
ENSMUSG00000093726	sense_overlapping	Gm20667	ENSMUST00000175674	sense_overlapping		14	-1	67675106	1930
ENSMUSG00000118237	lincRNA	Gm50133	ENSMUST00000237102	lincRNA		19	-1	21950889	680
ENSMUSG00000027381	protein_coding	Bcl2l11	ENSMUST00000089634	protein_coding		2	1	128126038	2301
ENSMUSG00000078210	processed_pseudogene	Gm5924	ENSMUST00000132554	processed_pseudogene		X	1	5338792	871
ENSMUSG00000118226	lincRNA	Gm50134	ENSMUST00000237916	lincRNA		19	1	21997331	971
ENSMUSG00000034932	protein_coding	Mrpl54	ENSMUST00000046114	protein_coding	principal1	10	-1	81266934	604
ENSMUSG00000118273	lincRNA	Gm41819	ENSMUST00000235257	lincRNA		19	1	21992573	1340
ENSMUSG00000107326	unprocessed_pseudogene	Gm43038	ENSMUST00000202359	unprocessed_pseudogene		5	-1	151668136	88
ENSMUSG00000105511	lincRNA	Gm33758	ENSMUST00000199230	lincRNA		3	1	143603805	407
ENSMUSG00000027433	protein_coding	Xrn2	ENSMUST00000028921	protein_coding	principal1	2	1	147012996	3434
ENSMUSG00000022157	protein_coding	Mcpt8	ENSMUST00000225107	nonsense_mediated_decay		14	-1	56085273	945
ENSMUSG00000027381	protein_coding	Bcl2l11	ENSMUST00000129206	processed_transcript		2	1	128127575	974
ENSMUSG00000107241	lincRNA	Gm43129	ENSMUST00000201237	lincRNA		5	1	151685811	603
ENSMUSG00000106109	lincRNA	Gm42704	ENSMUST00000196875	lincRNA		3	1	143650310	1778
ENSMUSG00000034932	protein_coding	Mrpl54	ENSMUST00000145452	retained_intron		10	-1	81266924	530
ENSMUSG00000103816	TEC	Gm38006	ENSMUST00000192421	TEC		3	1	143644890	697
ENSMUSG00000027433	protein_coding	Xrn2	ENSMUST00000147057	retained_intron		2	1	147029552	623
ENSMUSG00000067010	protein_coding	Vmn2r10	ENSMUST00000079163	protein_coding	principal1	5	-1	109006527	8111
ENSMUSG00000026632	protein_coding	Tatdn3	ENSMUST00000085633	protein_coding		1	-1	191062904	1089
ENSMUSG00000023153	protein_coding	Tmem52	ENSMUST00000023920	protein_coding	alternative2	4	1	155469131	932
ENSMUSG00000027433	protein_coding	Xrn2	ENSMUST00000136136	retained_intron		2	1	147042546	575
ENSMUSG00000067010	protein_coding	Vmn2r10	ENSMUST00000232815	retained_intron		5	-1	109006527	9268
ENSMUSG00000067010	protein_coding	Vmn2r10	ENSMUST00000233053	protein_coding		5	-1	109006527	7585
ENSMUSG00000096074	IG_V_gene	Ighv1-72	ENSMUST00000103541	IG_V_gene	principal1	12	-1	115758461	396
ENSMUSG00000027433	protein_coding	Xrn2	ENSMUST00000137358	retained_intron		2	1	147061440	335
ENSMUSG00000095603	protein_coding	Olfr106-ps	ENSMUST00000214704	protein_coding	principal1	17	1	37390393	1791
ENSMUSG00000091881	antisense	Gm17146	ENSMUST00000108464	antisense		3	1	88722090	372
ENSMUSG00000096916	protein_coding	Zfp850	ENSMUST00000180502	protein_coding	principal1	7	-1	28014115	6163
ENSMUSG00000095603	protein_coding	Olfr106-ps	ENSMUST00000209002	processed_transcript		17	1	37394446	1152
ENSMUSG00000027381	protein_coding	Bcl2l11	ENSMUST00000103210	protein_coding	alternative2	2	1	128126050	3538
ENSMUSG00000026632	protein_coding	Tatdn3	ENSMUST00000110891	protein_coding		1	-1	191062904	1214
ENSMUSG00000096916	protein_coding	Zfp850	ENSMUST00000180024	protein_coding	principal1	7	-1	28008416	2070
ENSMUSG00000096916	protein_coding	Zfp850	ENSMUST00000099111	protein_coding		7	-1	27985796	941
ENSMUSG00000023153	protein_coding	Tmem52	ENSMUST00000145796	retained_intron		4	1	155469147	940
ENSMUSG00000108266	processed_pseudogene	Gm5305	ENSMUST00000204010	processed_pseudogene		6	-1	49543727	746
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000102723	protein_coding	alternative1	4	-1	110287527	4024
ENSMUSG00000107982	processed_pseudogene	Gm44219	ENSMUST00000203005	processed_pseudogene		6	-1	49727523	273
ENSMUSG00000085568	processed_transcript	Gm14858	ENSMUST00000144761	processed_transcript		X	1	102252522	652
ENSMUSG00000053783	protein_coding	1700016K19Rik	ENSMUST00000066408	protein_coding	principal1	11	1	75999912	921
ENSMUSG00000085568	processed_transcript	Gm14858	ENSMUST00000138614	processed_transcript		X	1	102252651	1758
ENSMUSG00000038187	protein_coding	Btbd10	ENSMUST00000117577	protein_coding	alternative1	7	-1	113347285	2384
ENSMUSG00000026632	protein_coding	Tatdn3	ENSMUST00000027945	protein_coding	alternative2	1	-1	191062905	1196
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000106598	protein_coding	alternative2	4	-1	110287527	3997
ENSMUSG00000026632	protein_coding	Tatdn3	ENSMUST00000156341	retained_intron		1	-1	191049833	1028
ENSMUSG00000026632	protein_coding	Tatdn3	ENSMUST00000153757	retained_intron		1	-1	191058846	498
ENSMUSG00000026632	protein_coding	Tatdn3	ENSMUST00000124497	retained_intron		1	-1	191059441	741
ENSMUSG00000027381	protein_coding	Bcl2l11	ENSMUST00000103211	protein_coding	alternative2	2	1	128126040	672
ENSMUSG00000021645	protein_coding	Smn1	ENSMUST00000022147	protein_coding	principal1	13	1	100124852	1222
ENSMUSG00000023153	protein_coding	Tmem52	ENSMUST00000178188	protein_coding	alternative2	4	1	155469114	908
ENSMUSG00000027381	protein_coding	Bcl2l11	ENSMUST00000132201	processed_transcript		2	1	128128131	391
ENSMUSG00000026632	protein_coding	Tatdn3	ENSMUST00000143876	retained_intron		1	-1	191062904	342
ENSMUSG00000023153	protein_coding	Tmem52	ENSMUST00000178238	protein_coding	principal4	4	1	155469114	968
ENSMUSG00000026632	protein_coding	Tatdn3	ENSMUST00000156527	retained_intron		1	-1	191062904	261
ENSMUSG00000038187	protein_coding	Btbd10	ENSMUST00000047091	protein_coding	principal2	7	-1	113369339	2581
ENSMUSG00000021645	protein_coding	Smn1	ENSMUST00000134514	retained_intron		13	1	100124858	453
ENSMUSG00000056515	protein_coding	Rab31	ENSMUST00000070673	protein_coding	principal1	17	-1	65772752	3473
ENSMUSG00000038187	protein_coding	Btbd10	ENSMUST00000119278	protein_coding		7	-1	113369392	2394
ENSMUSG00000027381	protein_coding	Bcl2l11	ENSMUST00000019281	protein_coding	alternative2	2	1	128126038	2490
ENSMUSG00000021645	protein_coding	Smn1	ENSMUST00000140745	nonsense_mediated_decay		13	1	100124858	421
ENSMUSG00000038187	protein_coding	Btbd10	ENSMUST00000135510	nonsense_mediated_decay		7	-1	113351938	2179
ENSMUSG00000091686	lincRNA	4930471C04Rik	ENSMUST00000166038	lincRNA		14	-1	64104235	865
ENSMUSG00000038187	protein_coding	Btbd10	ENSMUST00000139650	retained_intron		7	-1	113331309	2882
ENSMUSG00000056515	protein_coding	Rab31	ENSMUST00000233258	protein_coding		17	-1	65772640	555
ENSMUSG00000021645	protein_coding	Smn1	ENSMUST00000091321	protein_coding		13	1	100124894	223
ENSMUSG00000085316	lincRNA	D330050G23Rik	ENSMUST00000126467	lincRNA		2	1	116900152	1710
ENSMUSG00000117114	processed_pseudogene	Gm49867	ENSMUST00000233942	processed_pseudogene		17	-1	65661578	252
ENSMUSG00000029819	protein_coding	Npy	ENSMUST00000031843	protein_coding	principal1	6	1	49822710	566
ENSMUSG00000021645	protein_coding	Smn1	ENSMUST00000143937	protein_coding		13	1	100124924	485
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000106597	protein_coding	principal4	4	-1	110286889	4149
ENSMUSG00000021645	protein_coding	Smn1	ENSMUST00000125572	retained_intron		13	1	100126125	600
ENSMUSG00000038187	protein_coding	Btbd10	ENSMUST00000129567	retained_intron		7	-1	113369336	480
ENSMUSG00000085316	lincRNA	D330050G23Rik	ENSMUST00000128305	lincRNA		2	1	116900175	1616
ENSMUSG00000021645	protein_coding	Smn1	ENSMUST00000151389	retained_intron		13	1	100127875	547
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000102722	protein_coding	alternative2	4	-1	110286889	4107
ENSMUSG00000085316	lincRNA	D330050G23Rik	ENSMUST00000155323	lincRNA		2	1	116900194	654
ENSMUSG00000082183	processed_pseudogene	Gm15994	ENSMUST00000118029	processed_pseudogene		7	1	113324258	402
ENSMUSG00000116260	antisense	1700041B01Rik	ENSMUST00000230183	antisense		15	1	78670785	503
ENSMUSG00000021645	protein_coding	Smn1	ENSMUST00000147306	retained_intron		13	1	100131003	639
ENSMUSG00000021645	protein_coding	Smn1	ENSMUST00000135355	retained_intron		13	1	100135393	417
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000106600	protein_coding		4	-1	110290272	3799
ENSMUSG00000099470	lincRNA	Gm29340	ENSMUST00000188763	lincRNA		2	-1	116976428	3854
ENSMUSG00000118647	unitary_pseudogene	AL670227.1	ENSMUST00000239493	unitary_pseudogene		4	-1	155471705	224
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000106601	protein_coding	alternative2	4	-1	110292722	3775
ENSMUSG00000032306	protein_coding	Mpi	ENSMUST00000034856	protein_coding	principal1	9	-1	57552763	1780
ENSMUSG00000043460	protein_coding	Elfn2	ENSMUST00000229441	protein_coding	principal1	15	-1	78718113	7537
ENSMUSG00000074930	processed_pseudogene	Gm13981	ENSMUST00000122360	processed_pseudogene		2	1	117055566	447
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000142722	protein_coding		4	-1	110290893	488
ENSMUSG00000032306	protein_coding	Mpi	ENSMUST00000140671	retained_intron		9	-1	57552266	917
ENSMUSG00000043460	protein_coding	Elfn2	ENSMUST00000088592	protein_coding	principal1	15	-1	78718771	5102
ENSMUSG00000097224	antisense	Gm26716	ENSMUST00000181227	antisense		4	-1	130826313	415
ENSMUSG00000026649	protein_coding	Cfap126	ENSMUST00000129651	protein_coding	alternative2	1	1	171113918	766
ENSMUSG00000032306	protein_coding	Mpi	ENSMUST00000145543	retained_intron		9	-1	57549672	757
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000153200	processed_transcript		4	-1	110223148	869
ENSMUSG00000087451	antisense	Gm12970	ENSMUST00000134911	antisense		4	-1	130812326	581
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000144554	processed_transcript		4	-1	110274162	464
ENSMUSG00000032306	protein_coding	Mpi	ENSMUST00000156428	nonsense_mediated_decay		9	-1	57552709	511
ENSMUSG00000043460	protein_coding	Elfn2	ENSMUST00000230478	processed_transcript		15	-1	78675226	411
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000114000	protein_coding	principal1	X	1	82948903	14910
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000153906	protein_coding		4	-1	110287527	663
ENSMUSG00000028546	protein_coding	Elavl4	ENSMUST00000138972	protein_coding		4	-1	110286616	644
ENSMUSG00000043460	protein_coding	Elfn2	ENSMUST00000229550	processed_transcript		15	-1	78710779	338
ENSMUSG00000032306	protein_coding	Mpi	ENSMUST00000124593	retained_intron		9	-1	57552716	939
ENSMUSG00000039997	protein_coding	Ifi203	ENSMUST00000123708	protein_coding	principal3	1	-1	173942492	3482
ENSMUSG00000107716	TEC	Gm43997	ENSMUST00000203986	TEC		6	1	94799432	1005
ENSMUSG00000083928	processed_pseudogene	Gm4991	ENSMUST00000118899	processed_pseudogene		X	1	109910221	1552
ENSMUSG00000039997	protein_coding	Ifi203	ENSMUST00000156895	protein_coding	alternative2	1	-1	173942672	3605
ENSMUSG00000097943	processed_pseudogene	Gm7833	ENSMUST00000183288	processed_pseudogene		6	1	94820530	990
ENSMUSG00000082853	processed_pseudogene	Gm7134	ENSMUST00000122296	processed_pseudogene		X	1	110372753	2406
ENSMUSG00000107940	processed_pseudogene	Gm44100	ENSMUST00000204329	processed_pseudogene		6	-1	94848833	436
ENSMUSG00000062510	protein_coding	Nsl1	ENSMUST00000076952	protein_coding		1	1	191063012	608
ENSMUSG00000026649	protein_coding	Cfap126	ENSMUST00000151340	protein_coding		1	1	171113989	793
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000147740	retained_intron		X	1	83043402	3055
ENSMUSG00000062510	protein_coding	Nsl1	ENSMUST00000139340	protein_coding		1	1	191063024	837
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000239269	protein_coding		X	1	83855407	10809
ENSMUSG00000031103	protein_coding	Elf4	ENSMUST00000114958	protein_coding	principal1	X	-1	48454169	6088
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000141261	processed_transcript		X	1	83927900	704
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000139998	processed_transcript		X	1	84076649	369
ENSMUSG00000031103	protein_coding	Elf4	ENSMUST00000140486	protein_coding		X	-1	48463132	1438
ENSMUSG00000026649	protein_coding	Cfap126	ENSMUST00000027959	protein_coding	principal2	1	1	171121661	1034
ENSMUSG00000024600	protein_coding	Slc27a6	ENSMUST00000025500	protein_coding	principal1	18	1	58556257	2485
ENSMUSG00000025743	protein_coding	Sdc3	ENSMUST00000070478	protein_coding	principal1	4	1	130792537	4973
ENSMUSG00000031103	protein_coding	Elf4	ENSMUST00000033429	protein_coding	principal1	X	-1	48463132	5847
ENSMUSG00000063172	protein_coding	Hspb11	ENSMUST00000152717	protein_coding		4	1	107253593	581
ENSMUSG00000062510	protein_coding	Nsl1	ENSMUST00000078259	protein_coding	principal1	1	1	191063031	4879
ENSMUSG00000026649	protein_coding	Cfap126	ENSMUST00000148200	processed_transcript		1	1	171121664	350
ENSMUSG00000026649	protein_coding	Cfap126	ENSMUST00000127394	protein_coding		1	1	171122677	581
ENSMUSG00000025743	protein_coding	Sdc3	ENSMUST00000146093	retained_intron		4	1	130792704	528
ENSMUSG00000107664	processed_pseudogene	Gm18007	ENSMUST00000205019	processed_pseudogene		6	-1	49858846	844
ENSMUSG00000103576	antisense	Gm38188	ENSMUST00000192879	antisense		1	-1	191078680	856
ENSMUSG00000040314	protein_coding	Ctsg	ENSMUST00000015583	protein_coding	principal1	14	-1	56102574	1002
ENSMUSG00000039997	protein_coding	Ifi203	ENSMUST00000128430	processed_transcript		1	-1	173942460	1884
ENSMUSG00000108071	lincRNA	Gm3455	ENSMUST00000204812	lincRNA		6	1	50051186	1954
ENSMUSG00000063188	protein_coding	Olfr107	ENSMUST00000215974	protein_coding	principal1	17	1	37399407	2282
ENSMUSG00000026649	protein_coding	Cfap126	ENSMUST00000143623	nonsense_mediated_decay		1	1	171123150	741
ENSMUSG00000028057	protein_coding	Rit1	ENSMUST00000029692	protein_coding	principal1	3	1	88716838	1204
ENSMUSG00000063188	protein_coding	Olfr107	ENSMUST00000215894	protein_coding	principal1	17	1	37399413	2512
ENSMUSG00000063172	protein_coding	Hspb11	ENSMUST00000156934	processed_transcript		4	1	107253898	1502
ENSMUSG00000025743	protein_coding	Sdc3	ENSMUST00000152591	protein_coding		4	1	130811938	644
ENSMUSG00000039997	protein_coding	Ifi203	ENSMUST00000129829	protein_coding	alternative2	1	-1	173942491	3054
ENSMUSG00000026649	protein_coding	Cfap126	ENSMUST00000156789	nonsense_mediated_decay		1	1	171123174	398
ENSMUSG00000025743	protein_coding	Sdc3	ENSMUST00000141297	protein_coding		4	1	130814304	659
ENSMUSG00000063188	protein_coding	Olfr107	ENSMUST00000215947	protein_coding	principal1	17	1	37399226	3954
ENSMUSG00000040314	protein_coding	Ctsg	ENSMUST00000225312	processed_transcript		14	-1	56101775	546
ENSMUSG00000039997	protein_coding	Ifi203	ENSMUST00000135331	processed_transcript		1	-1	173942491	658
ENSMUSG00000005483	protein_coding	Dnajb1	ENSMUST00000005620	protein_coding	principal1	8	1	83608193	2996
ENSMUSG00000026649	protein_coding	Cfap126	ENSMUST00000124157	protein_coding	alternative2	1	1	171125034	528
ENSMUSG00000028057	protein_coding	Rit1	ENSMUST00000171645	protein_coding		3	1	88716876	460
ENSMUSG00000025743	protein_coding	Sdc3	ENSMUST00000140623	retained_intron		4	1	130816845	1624
ENSMUSG00000063188	protein_coding	Olfr107	ENSMUST00000216844	protein_coding	principal1	17	1	37399402	4021
ENSMUSG00000039997	protein_coding	Ifi203	ENSMUST00000138143	retained_intron		1	-1	173942480	2471
ENSMUSG00000039997	protein_coding	Ifi203	ENSMUST00000140143	processed_transcript		1	-1	173942454	444
ENSMUSG00000059995	protein_coding	Atxn7l3	ENSMUST00000141516	protein_coding		11	-1	102294163	3130
ENSMUSG00000039997	protein_coding	Ifi203	ENSMUST00000042228	protein_coding	alternative2	1	-1	173942460	3754
ENSMUSG00000005483	protein_coding	Dnajb1	ENSMUST00000212300	protein_coding		8	1	83608553	2854
ENSMUSG00000067567	protein_coding	Hdac8	ENSMUST00000087916	protein_coding	principal1	X	-1	102505359	1936
ENSMUSG00000063188	protein_coding	Olfr107	ENSMUST00000077008	protein_coding	principal1	17	1	37405477	1033
ENSMUSG00000028057	protein_coding	Rit1	ENSMUST00000165846	retained_intron		3	1	88716881	628
ENSMUSG00000039997	protein_coding	Ifi203	ENSMUST00000081216	protein_coding	principal3	1	-1	173942460	3610
ENSMUSG00000039198	protein_coding	Ptchd3	ENSMUST00000125199	retained_intron		11	1	121830247	1543
ENSMUSG00000103789	TEC	Gm10129	ENSMUST00000193100	TEC		13	-1	38151792	1316
ENSMUSG00000103789	TEC	Gm10129	ENSMUST00000191991	TEC		13	-1	38151792	360
ENSMUSG00000027351	protein_coding	Spred1	ENSMUST00000028829	protein_coding	principal1	2	1	117121374	6016
ENSMUSG00000063172	protein_coding	Hspb11	ENSMUST00000106749	protein_coding	principal1	4	1	107253903	607
ENSMUSG00000108187	lincRNA	4930511E03Rik	ENSMUST00000203778	lincRNA		6	1	94943834	2232
ENSMUSG00000028057	protein_coding	Rit1	ENSMUST00000170377	nonsense_mediated_decay		3	1	88716894	2573
ENSMUSG00000027351	protein_coding	Spred1	ENSMUST00000110901	protein_coding		2	1	117121638	1440
ENSMUSG00000074476	protein_coding	Spc24	ENSMUST00000098942	protein_coding	principal1	9	-1	21760303	1366
ENSMUSG00000022156	protein_coding	Gzme	ENSMUST00000089549	protein_coding	principal1	14	-1	56120625	916
ENSMUSG00000081842	processed_pseudogene	Rap1a-ps2	ENSMUST00000118467	processed_pseudogene		2	1	117240883	559
ENSMUSG00000074476	protein_coding	Spc24	ENSMUST00000217382	protein_coding		9	-1	21760282	1696
ENSMUSG00000028057	protein_coding	Rit1	ENSMUST00000166234	retained_intron		3	1	88716898	2677
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000146331	retained_intron		X	1	84599201	2494
ENSMUSG00000021966	protein_coding	Prss52	ENSMUST00000022537	protein_coding	principal1	14	1	64104286	1064
ENSMUSG00000074476	protein_coding	Spc24	ENSMUST00000213665	retained_intron		9	-1	21757819	801
ENSMUSG00000063172	protein_coding	Hspb11	ENSMUST00000046558	protein_coding	principal1	4	1	107253925	608
ENSMUSG00000079536	protein_coding	Ctag2l1	ENSMUST00000114125	protein_coding	principal1	X	-1	74481399	627
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000156107	retained_intron		X	1	84772711	2145
ENSMUSG00000074476	protein_coding	Spc24	ENSMUST00000216057	protein_coding		9	-1	21760303	627
ENSMUSG00000085413	antisense	Kbtbd8os	ENSMUST00000135145	antisense		6	-1	95117631	427
ENSMUSG00000039198	protein_coding	Ptchd3	ENSMUST00000036690	protein_coding	principal1	11	1	121830247	3194
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000128983	retained_intron		X	1	85048295	1792
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000080919	protein_coding	principal1	4	-1	126202760	4378
ENSMUSG00000028979	protein_coding	Masp2	ENSMUST00000105701	protein_coding		4	1	148602554	738
ENSMUSG00000074476	protein_coding	Spc24	ENSMUST00000214149	protein_coding		9	-1	21760302	356
ENSMUSG00000067567	protein_coding	Hdac8	ENSMUST00000154872	nonsense_mediated_decay		X	-1	102505081	686
ENSMUSG00000063172	protein_coding	Hspb11	ENSMUST00000137911	processed_transcript		4	1	107262467	365
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000132333	retained_intron		X	1	85048319	2133
ENSMUSG00000090785	antisense	Gm17116	ENSMUST00000169175	antisense		14	-1	64114641	1013
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000140390	processed_transcript		4	-1	126168449	2656
ENSMUSG00000076910	TR_J_gene	Traj19	ENSMUST00000103722	TR_J_gene	principal1	14	1	54200386	61
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000163459	protein_coding		4	-1	126175447	583
ENSMUSG00000052951	antisense	C130021I20Rik	ENSMUST00000152118	antisense		2	1	33641193	745
ENSMUSG00000067567	protein_coding	Hdac8	ENSMUST00000148481	processed_transcript		X	-1	102505146	2183
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000239019	protein_coding		X	1	85048319	4179
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000154702	processed_transcript		4	-1	126167476	609
ENSMUSG00000028057	protein_coding	Rit1	ENSMUST00000172333	nonsense_mediated_decay		3	1	88716899	993
ENSMUSG00000076911	TR_J_gene	Traj18	ENSMUST00000103723	TR_J_gene	principal1	14	1	54200777	66
ENSMUSG00000030031	protein_coding	Kbtbd8	ENSMUST00000122938	protein_coding		6	1	95117240	472
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000149433	retained_intron		X	1	85048322	1383
ENSMUSG00000067567	protein_coding	Hdac8	ENSMUST00000137785	processed_transcript		X	-1	102505345	2267
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000113992	protein_coding		X	1	85048413	1858
ENSMUSG00000031210	protein_coding	Gpr165	ENSMUST00000139205	retained_intron		X	1	96713441	1408
ENSMUSG00000067567	protein_coding	Hdac8	ENSMUST00000154024	retained_intron		X	-1	102504741	591
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000163176	nonsense_mediated_decay		4	-1	126173527	688
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000162309	protein_coding	principal3	8	1	127063893	5659
ENSMUSG00000052951	antisense	C130021I20Rik	ENSMUST00000147294	antisense		2	1	33641331	3693
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000113991	protein_coding		X	1	85048413	4438
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000106142	protein_coding		4	-1	126202589	2744
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000163306	protein_coding		4	-1	126178526	407
ENSMUSG00000028057	protein_coding	Rit1	ENSMUST00000172252	protein_coding		3	1	88716906	820
ENSMUSG00000045103	protein_coding	Dmd	ENSMUST00000123308	processed_transcript		X	1	85177936	596
ENSMUSG00000105279	lincRNA	Gm6260	ENSMUST00000197170	lincRNA		3	-1	143712143	921
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000151728	retained_intron		4	-1	126202612	2238
ENSMUSG00000105279	lincRNA	Gm6260	ENSMUST00000196279	lincRNA		3	-1	143712210	291
ENSMUSG00000081583	processed_pseudogene	Gm14769	ENSMUST00000118590	processed_pseudogene		X	1	84063333	432
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000169855	processed_transcript		4	-1	126180147	450
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000236008	protein_coding		19	-1	53032145	2221
ENSMUSG00000028057	protein_coding	Rit1	ENSMUST00000172187	retained_intron		3	1	88716911	494
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000123008	nonsense_mediated_decay		4	-1	126194391	693
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000136157	protein_coding		4	-1	126201117	350
ENSMUSG00000059256	protein_coding	Gzmd	ENSMUST00000082093	protein_coding	principal1	14	-1	56132608	964
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000169403	protein_coding		4	-1	126202589	339
ENSMUSG00000030031	protein_coding	Kbtbd8	ENSMUST00000032107	protein_coding	principal1	6	1	95117740	4869
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000130477	retained_intron		4	-1	126202623	578
ENSMUSG00000082707	processed_pseudogene	Gm6881	ENSMUST00000121811	processed_pseudogene		X	1	74486589	833
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000168568	retained_intron		4	-1	126202659	521
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000130334	protein_coding		4	-1	126202647	378
ENSMUSG00000031210	protein_coding	Gpr165	ENSMUST00000033554	protein_coding	principal1	X	1	96713492	3170
ENSMUSG00000016921	protein_coding	Srsf6	ENSMUST00000193611	retained_intron		2	1	162931528	2897
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000142125	protein_coding		4	-1	126202376	673
ENSMUSG00000031210	protein_coding	Gpr165	ENSMUST00000130276	retained_intron		X	1	96713513	1655
ENSMUSG00000099708	antisense	Gm29361	ENSMUST00000183323	antisense		12	-1	83633833	2000
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000106141	protein_coding		4	-1	126202390	361
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000183274	protein_coding		19	-1	53038553	2120
ENSMUSG00000031210	protein_coding	Gpr165	ENSMUST00000137479	retained_intron		X	1	96714197	2964
ENSMUSG00000030031	protein_coding	Kbtbd8	ENSMUST00000119582	protein_coding		6	1	95117880	4518
ENSMUSG00000043962	protein_coding	Thrap3	ENSMUST00000124327	processed_transcript		4	-1	126202670	590
ENSMUSG00000082735	processed_pseudogene	Gm16394	ENSMUST00000117289	processed_pseudogene		X	-1	96887873	675
ENSMUSG00000082397	processed_pseudogene	Gm14803	ENSMUST00000117163	processed_pseudogene		X	-1	96935224	361
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000182500	nonsense_mediated_decay		19	-1	53038641	3307
ENSMUSG00000093545	processed_pseudogene	Gm5871	ENSMUST00000176461	processed_pseudogene		5	-1	109016915	718
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000237294	protein_coding	alternative1	19	-1	53032146	2956
ENSMUSG00000081606	processed_pseudogene	Gm9059	ENSMUST00000118319	processed_pseudogene		X	-1	96966648	183
ENSMUSG00000030031	protein_coding	Kbtbd8	ENSMUST00000145387	processed_transcript		6	1	95117984	385
ENSMUSG00000031965	protein_coding	Tbx20	ENSMUST00000052946	protein_coding	principal1	9	-1	24774284	9091
ENSMUSG00000105869	processed_pseudogene	Gm9408	ENSMUST00000197375	processed_pseudogene		3	1	136331486	1505
ENSMUSG00000027827	protein_coding	Kcnab1	ENSMUST00000238901	protein_coding		3	1	64949196	1635
ENSMUSG00000028979	protein_coding	Masp2	ENSMUST00000052060	protein_coding	principal1	4	1	148602564	3058
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000236058	protein_coding	alternative1	19	-1	53035392	3442
ENSMUSG00000106363	processed_pseudogene	Gm43402	ENSMUST00000197159	processed_pseudogene		3	1	136346204	159
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000238001	retained_intron		19	-1	53004904	1422
ENSMUSG00000031965	protein_coding	Tbx20	ENSMUST00000215802	protein_coding		9	-1	24769680	455
ENSMUSG00000027827	protein_coding	Kcnab1	ENSMUST00000193778	processed_transcript		3	1	64949223	2174
ENSMUSG00000027827	protein_coding	Kcnab1	ENSMUST00000239069	protein_coding	alternative1	3	1	64977418	1677
ENSMUSG00000083350	processed_pseudogene	Gm9060	ENSMUST00000120926	processed_pseudogene		X	-1	97048511	805
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000182877	processed_transcript		19	-1	53020296	2475
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000235453	retained_intron		19	-1	52999873	1679
ENSMUSG00000031965	protein_coding	Tbx20	ENSMUST00000166018	protein_coding		9	-1	24774303	1801
ENSMUSG00000087164	antisense	Nr5a1os	ENSMUST00000146954	antisense		2	1	38712676	926
ENSMUSG00000052160	protein_coding	Pld4	ENSMUST00000063888	protein_coding	principal1	12	1	112760655	1982
ENSMUSG00000033790	protein_coding	Tubgcp5	ENSMUST00000032627	protein_coding		7	1	55794154	3905
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000169383	nonsense_mediated_decay		17	1	46161032	2929
ENSMUSG00000091450	protein_coding	Vmn2r11	ENSMUST00000164875	protein_coding	principal1	5	-1	109059569	6216
ENSMUSG00000028979	protein_coding	Masp2	ENSMUST00000154898	retained_intron		4	1	148602568	1181
ENSMUSG00000026630	protein_coding	Batf3	ENSMUST00000194833	processed_transcript		1	1	191097847	532
ENSMUSG00000028979	protein_coding	Masp2	ENSMUST00000136647	retained_intron		4	1	148602575	794
ENSMUSG00000027230	protein_coding	Creb3l1	ENSMUST00000028663	protein_coding	principal1	2	-1	92024502	2603
ENSMUSG00000031965	protein_coding	Tbx20	ENSMUST00000217597	retained_intron		9	-1	24774284	3486
ENSMUSG00000091450	protein_coding	Vmn2r11	ENSMUST00000233971	nonsense_mediated_decay		5	-1	109059569	7052
ENSMUSG00000023940	protein_coding	Sgo1	ENSMUST00000024736	protein_coding	principal1	17	-1	53689333	3628
ENSMUSG00000091450	protein_coding	Vmn2r11	ENSMUST00000233894	retained_intron		5	-1	109059569	2538
ENSMUSG00000031965	protein_coding	Tbx20	ENSMUST00000216564	processed_transcript		9	-1	24769750	637
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000222588	protein_coding	alternative2	13	-1	74770736	4765
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000183108	protein_coding	principal2	19	-1	53040214	4078
ENSMUSG00000045275	protein_coding	Lca5l	ENSMUST00000113804	protein_coding	alternative2	16	-1	96192250	3162
ENSMUSG00000052160	protein_coding	Pld4	ENSMUST00000220826	retained_intron		12	1	112760666	671
ENSMUSG00000059995	protein_coding	Atxn7l3	ENSMUST00000137387	protein_coding		11	-1	102294987	3408
ENSMUSG00000059995	protein_coding	Atxn7l3	ENSMUST00000107134	protein_coding	alternative1	11	-1	102295312	3712
ENSMUSG00000026630	protein_coding	Batf3	ENSMUST00000193771	processed_transcript		1	1	191097880	1110
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000182728	retained_intron		19	-1	52996633	541
ENSMUSG00000045275	protein_coding	Lca5l	ENSMUST00000233151	protein_coding	alternative2	16	-1	96185849	2737
ENSMUSG00000023940	protein_coding	Sgo1	ENSMUST00000144474	processed_transcript		17	-1	53689286	506
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000183188	processed_transcript		19	-1	53015340	689
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000182534	processed_transcript		19	-1	53020131	585
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000160272	protein_coding	alternative2	8	1	127064056	5815
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000182844	retained_intron		19	-1	53013604	306
ENSMUSG00000045275	protein_coding	Lca5l	ENSMUST00000142620	retained_intron		16	-1	96192250	3074
ENSMUSG00000023940	protein_coding	Sgo1	ENSMUST00000146019	processed_transcript		17	-1	53689278	382
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000182097	protein_coding		19	-1	53038560	698
ENSMUSG00000052160	protein_coding	Pld4	ENSMUST00000221115	processed_transcript		12	1	112761676	2182
ENSMUSG00000052160	protein_coding	Pld4	ENSMUST00000221811	retained_intron		12	1	112765090	693
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000182887	processed_transcript		19	-1	53032145	350
ENSMUSG00000054889	protein_coding	Dsp	ENSMUST00000124830	protein_coding	principal2	13	1	38151294	9592
ENSMUSG00000052160	protein_coding	Pld4	ENSMUST00000222886	retained_intron		12	1	112766544	424
ENSMUSG00000059995	protein_coding	Atxn7l3	ENSMUST00000073234	protein_coding	alternative1	11	-1	102296631	3688
ENSMUSG00000025027	protein_coding	Xpnpep1	ENSMUST00000182939	processed_transcript		19	-1	53038564	378
ENSMUSG00000029458	protein_coding	Brap	ENSMUST00000031414	protein_coding	principal1	5	1	121660563	3744
ENSMUSG00000054889	protein_coding	Dsp	ENSMUST00000127906	protein_coding	alternative2	13	1	38151328	7761
ENSMUSG00000045275	protein_coding	Lca5l	ENSMUST00000154445	processed_transcript		16	-1	96192257	2210
ENSMUSG00000026630	protein_coding	Batf3	ENSMUST00000027943	protein_coding	principal1	1	1	191098325	801
ENSMUSG00000045275	protein_coding	Lca5l	ENSMUST00000233889	processed_transcript		16	-1	96192271	632
ENSMUSG00000054889	protein_coding	Dsp	ENSMUST00000145151	processed_transcript		13	1	38178367	534
ENSMUSG00000026630	protein_coding	Batf3	ENSMUST00000192268	processed_transcript		1	1	191098383	438
ENSMUSG00000059995	protein_coding	Atxn7l3	ENSMUST00000107132	protein_coding	principal4	11	-1	102296629	3706
ENSMUSG00000045275	protein_coding	Lca5l	ENSMUST00000054855	protein_coding	principal2	16	-1	96192257	2508
ENSMUSG00000020846	protein_coding	Rflnb	ENSMUST00000021207	protein_coding	principal1	11	-1	76027782	3512
ENSMUSG00000026630	protein_coding	Batf3	ENSMUST00000191621	retained_intron		1	1	191100477	815
ENSMUSG00000095964	unprocessed_pseudogene	Gm6221	ENSMUST00000180064	unprocessed_pseudogene		X	1	135409856	1386
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000162907	protein_coding	alternative2	8	1	127064070	4682
ENSMUSG00000114284	antisense	9630015K15Rik	ENSMUST00000225122	antisense		14	1	64116314	572
ENSMUSG00000016921	protein_coding	Srsf6	ENSMUST00000130411	protein_coding	principal1	2	1	162931528	3527
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000223206	protein_coding	alternative2	13	-1	74808810	5141
ENSMUSG00000016921	protein_coding	Srsf6	ENSMUST00000017065	nonsense_mediated_decay		2	1	162931562	1666
ENSMUSG00000074647	protein_coding	Fam83c	ENSMUST00000029143	protein_coding	alternative2	2	-1	155834854	3972
ENSMUSG00000029458	protein_coding	Brap	ENSMUST00000140996	nonsense_mediated_decay		5	1	121660574	3524
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000223033	protein_coding	alternative2	13	-1	74770649	2857
ENSMUSG00000089810	antisense	Gm16536	ENSMUST00000162209	antisense		9	-1	45858357	1589
ENSMUSG00000029458	protein_coding	Brap	ENSMUST00000132491	retained_intron		5	1	121660601	2222
ENSMUSG00000016921	protein_coding	Srsf6	ENSMUST00000126163	protein_coding		2	1	162931661	515
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000223126	protein_coding	alternative2	13	-1	74770590	2696
ENSMUSG00000074647	protein_coding	Fam83c	ENSMUST00000239423	protein_coding	principal2	2	-1	155834854	2337
ENSMUSG00000029458	protein_coding	Brap	ENSMUST00000111765	protein_coding		5	1	121660869	3861
ENSMUSG00000029403	protein_coding	Cdkl2	ENSMUST00000069937	protein_coding	alternative2	5	-1	92043041	3976
ENSMUSG00000117323	lincRNA	Gm36487	ENSMUST00000232963	lincRNA		17	1	69315994	1399
ENSMUSG00000086754	antisense	Gm16098	ENSMUST00000141926	antisense		2	1	155826788	796
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000201518	protein_coding		15	1	100870645	2565
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000065629	protein_coding	principal2	13	-1	74807939	2910
ENSMUSG00000029458	protein_coding	Brap	ENSMUST00000195952	nonsense_mediated_decay		5	1	121662041	827
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000200933	protein_coding		15	1	100870661	290
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000026129	protein_coding	principal3	11	-1	120617936	1881
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000220738	protein_coding		13	-1	74734261	1653
ENSMUSG00000029458	protein_coding	Brap	ENSMUST00000142701	protein_coding		5	1	121662050	851
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000223309	protein_coding		13	-1	74734231	1529
ENSMUSG00000093650	antisense	Gm20631	ENSMUST00000177239	antisense		1	1	150625266	5697
ENSMUSG00000117069	lincRNA	Gm49894	ENSMUST00000233910	lincRNA		17	-1	69384208	1128
ENSMUSG00000029458	protein_coding	Brap	ENSMUST00000148052	retained_intron		5	1	121662080	492
ENSMUSG00000093650	antisense	Gm20631	ENSMUST00000177268	antisense		1	1	150625299	1627
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000106188	protein_coding	alternative1	11	-1	120617925	1486
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000160593	retained_intron		8	1	127064098	5310
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000221873	retained_intron		13	-1	74700707	521
ENSMUSG00000029458	protein_coding	Brap	ENSMUST00000127703	processed_transcript		5	1	121666526	3094
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000162536	protein_coding	alternative2	8	1	127064245	5175
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000221208	retained_intron		13	-1	74700885	331
ENSMUSG00000029458	protein_coding	Brap	ENSMUST00000196897	retained_intron		5	1	121682928	4318
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000231578	protein_coding		13	-1	74808521	1571
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000220868	retained_intron		13	-1	74731938	3426
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000159141	nonsense_mediated_decay		8	1	127064259	520
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000159818	nonsense_mediated_decay		8	1	127064259	568
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000222373	retained_intron		13	-1	74737046	334
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000026921	protein_coding	alternative2	8	1	127064295	4050
ENSMUSG00000021585	protein_coding	Cast	ENSMUST00000223123	retained_intron		13	-1	74800449	1892
ENSMUSG00000005493	protein_coding	Msh4	ENSMUST00000005630	protein_coding	principal3	3	-1	153906138	3325
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000124504	retained_intron		11	-1	120612109	803
ENSMUSG00000029134	protein_coding	Plb1	ENSMUST00000202220	protein_coding	principal1	5	1	32232714	4771
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000143502	retained_intron		11	-1	120612081	889
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000134671	retained_intron		11	-1	120613074	724
ENSMUSG00000032085	protein_coding	Tagln	ENSMUST00000034590	protein_coding	principal1	9	-1	45936058	1595
ENSMUSG00000029134	protein_coding	Plb1	ENSMUST00000201313	retained_intron		5	1	32232748	1560
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000162665	protein_coding		8	1	127064295	4005
ENSMUSG00000029134	protein_coding	Plb1	ENSMUST00000202201	protein_coding		5	1	32239084	3539
ENSMUSG00000035506	protein_coding	Slc12a8	ENSMUST00000121925	protein_coding	principal2	16	1	33517328	2656
ENSMUSG00000029403	protein_coding	Cdkl2	ENSMUST00000086978	protein_coding	principal4	5	-1	92043042	4066
ENSMUSG00000032085	protein_coding	Tagln	ENSMUST00000216035	retained_intron		9	-1	45935873	933
ENSMUSG00000035506	protein_coding	Slc12a8	ENSMUST00000122427	protein_coding	alternative2	16	1	33518278	2070
ENSMUSG00000116016	protein_coding	Gm49496	ENSMUST00000231096	protein_coding	principal1	13	-1	111549947	1134
ENSMUSG00000032085	protein_coding	Tagln	ENSMUST00000215509	protein_coding		9	-1	45935574	369
ENSMUSG00000029403	protein_coding	Cdkl2	ENSMUST00000113143	protein_coding	alternative2	5	-1	92042696	2513
ENSMUSG00000029403	protein_coding	Cdkl2	ENSMUST00000113140	protein_coding	principal4	5	-1	92042672	2559
ENSMUSG00000049672	protein_coding	Zbtb14	ENSMUST00000112674	protein_coding	principal1	17	1	69383050	3743
ENSMUSG00000111521	antisense	Gm48529	ENSMUST00000213634	antisense		9	1	45930112	2327
ENSMUSG00000017740	protein_coding	Slc12a5	ENSMUST00000202623	protein_coding	alternative2	2	1	164960824	3574
ENSMUSG00000035506	protein_coding	Slc12a8	ENSMUST00000119173	protein_coding		16	1	33518536	2382
ENSMUSG00000025509	protein_coding	Pnpla2	ENSMUST00000164016	protein_coding	alternative2	7	1	141455198	2625
ENSMUSG00000017740	protein_coding	Slc12a5	ENSMUST00000202223	protein_coding		2	1	164960846	5690
ENSMUSG00000111521	antisense	Gm48529	ENSMUST00000213884	antisense		9	1	45930227	695
ENSMUSG00000049672	protein_coding	Zbtb14	ENSMUST00000062369	protein_coding	principal1	17	1	69383319	3625
ENSMUSG00000027613	protein_coding	Eif6	ENSMUST00000029142	protein_coding	principal1	2	-1	155826925	1500
ENSMUSG00000029403	protein_coding	Cdkl2	ENSMUST00000136037	retained_intron		5	-1	92017896	721
ENSMUSG00000020211	protein_coding	Sf3a2	ENSMUST00000148665	protein_coding	principal1	10	1	80798198	2213
ENSMUSG00000027827	protein_coding	Kcnab1	ENSMUST00000159525	processed_transcript		3	1	65109384	1923
ENSMUSG00000029403	protein_coding	Cdkl2	ENSMUST00000201357	protein_coding		5	-1	92031085	346
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000162602	protein_coding		8	1	127064345	3083
ENSMUSG00000027613	protein_coding	Eif6	ENSMUST00000109638	protein_coding		2	-1	155826663	1382
ENSMUSG00000029403	protein_coding	Cdkl2	ENSMUST00000201895	TEC		5	-1	92043883	1617
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000160581	protein_coding	alternative2	8	1	127064345	2954
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000161355	protein_coding		8	1	127064345	2981
ENSMUSG00000027613	protein_coding	Eif6	ENSMUST00000134811	processed_transcript		2	-1	155822480	402
ENSMUSG00000020211	protein_coding	Sf3a2	ENSMUST00000151928	protein_coding		10	1	80798732	781
ENSMUSG00000027613	protein_coding	Eif6	ENSMUST00000138962	retained_intron		2	-1	155826436	671
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000162531	protein_coding		8	1	127064345	3293
ENSMUSG00000020211	protein_coding	Sf3a2	ENSMUST00000147440	protein_coding		10	1	80798969	373
ENSMUSG00000049672	protein_coding	Zbtb14	ENSMUST00000112676	protein_coding	principal1	17	1	69383840	4358
ENSMUSG00000027613	protein_coding	Eif6	ENSMUST00000134278	protein_coding		2	-1	155826766	373
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000160766	protein_coding	alternative2	8	1	127064345	4949
ENSMUSG00000035506	protein_coding	Slc12a8	ENSMUST00000122314	protein_coding		16	1	33596562	2819
ENSMUSG00000027613	protein_coding	Eif6	ENSMUST00000129830	nonsense_mediated_decay		2	-1	155826436	555
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000159537	protein_coding		8	1	127064347	2838
ENSMUSG00000027827	protein_coding	Kcnab1	ENSMUST00000049230	protein_coding	principal2	3	1	65109384	3245
ENSMUSG00000113796	lincRNA	Gm36426	ENSMUST00000222903	lincRNA		13	-1	70681966	1795
ENSMUSG00000027613	protein_coding	Eif6	ENSMUST00000154841	nonsense_mediated_decay		2	-1	155826436	548
ENSMUSG00000033790	protein_coding	Tubgcp5	ENSMUST00000206789	retained_intron		7	1	55794165	3735
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000161277	protein_coding		8	1	127073240	2758
ENSMUSG00000035506	protein_coding	Slc12a8	ENSMUST00000117134	protein_coding		16	1	33596627	2081
ENSMUSG00000020211	protein_coding	Sf3a2	ENSMUST00000139461	retained_intron		10	1	80802500	727
ENSMUSG00000029134	protein_coding	Plb1	ENSMUST00000202453	processed_transcript		5	1	32353569	2938
ENSMUSG00000116292	processed_pseudogene	Gm49551	ENSMUST00000229607	processed_pseudogene		15	1	77468202	258
ENSMUSG00000054733	protein_coding	Msra	ENSMUST00000067927	protein_coding	principal3	14	-1	64455903	1860
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000238870	protein_coding		8	1	127171404	366
ENSMUSG00000017740	protein_coding	Slc12a5	ENSMUST00000099092	protein_coding	principal2	2	1	164967983	6028
ENSMUSG00000035506	protein_coding	Slc12a8	ENSMUST00000149291	processed_transcript		16	1	33616390	675
ENSMUSG00000025858	protein_coding	Get4	ENSMUST00000026976	protein_coding	principal3	5	1	139252324	2107
ENSMUSG00000107430	processed_pseudogene	Gm31532	ENSMUST00000203555	processed_pseudogene		17	1	53699706	767
ENSMUSG00000033790	protein_coding	Tubgcp5	ENSMUST00000206191	nonsense_mediated_decay		7	1	55794168	4120
ENSMUSG00000054733	protein_coding	Msra	ENSMUST00000210428	protein_coding	alternative1	14	-1	64416948	1180
ENSMUSG00000107684	processed_pseudogene	Rab5a-ps	ENSMUST00000203252	processed_pseudogene		17	-1	53702972	653
ENSMUSG00000029134	protein_coding	Plb1	ENSMUST00000202687	processed_transcript		5	1	32354694	723
ENSMUSG00000035506	protein_coding	Slc12a8	ENSMUST00000059056	protein_coding	principal2	16	1	33518329	3166
ENSMUSG00000017740	protein_coding	Slc12a5	ENSMUST00000202479	protein_coding		2	1	164968239	1202
ENSMUSG00000030050	protein_coding	Gkn1	ENSMUST00000032129	protein_coding	principal1	6	-1	87350942	1250
ENSMUSG00000026751	protein_coding	Nr5a1	ENSMUST00000112883	protein_coding	principal1	2	-1	38712234	2994
ENSMUSG00000035278	protein_coding	Plekhj1	ENSMUST00000218036	retained_intron		10	-1	80797888	772
ENSMUSG00000018909	protein_coding	Arrb1	ENSMUST00000098266	protein_coding	alternative1	7	1	99535466	7132
ENSMUSG00000054733	protein_coding	Msra	ENSMUST00000210363	protein_coding		14	-1	64417279	1042
ENSMUSG00000017740	protein_coding	Slc12a5	ENSMUST00000208579	processed_transcript		2	1	164968241	586
ENSMUSG00000093865	protein_coding	Lrit3	ENSMUST00000185462	protein_coding	principal2	3	-1	129804030	2456
ENSMUSG00000027827	protein_coding	Kcnab1	ENSMUST00000161404	processed_transcript		3	1	65188103	2849
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000106187	retained_intron		11	-1	120617908	1228
ENSMUSG00000033790	protein_coding	Tubgcp5	ENSMUST00000205796	protein_coding	principal1	7	1	55794191	3448
ENSMUSG00000005493	protein_coding	Msh4	ENSMUST00000191083	processed_transcript		3	-1	153865074	1000
ENSMUSG00000027827	protein_coding	Kcnab1	ENSMUST00000161979	processed_transcript		3	1	65253428	1965
ENSMUSG00000046411	processed_pseudogene	Rps4l-ps	ENSMUST00000059737	processed_pseudogene		7	-1	114927726	768
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000124468	retained_intron		11	-1	120613695	588
ENSMUSG00000087496	antisense	Gm13523	ENSMUST00000151820	antisense		2	-1	32876001	488
ENSMUSG00000054733	protein_coding	Msra	ENSMUST00000209392	retained_intron		14	-1	64440917	2556
ENSMUSG00000029134	protein_coding	Plb1	ENSMUST00000101376	protein_coding	principal1	5	1	32247351	4699
ENSMUSG00000054733	protein_coding	Msra	ENSMUST00000209513	processed_transcript		14	-1	64452456	87
ENSMUSG00000005493	protein_coding	Msh4	ENSMUST00000189189	retained_intron		3	-1	153865100	2129
ENSMUSG00000017740	protein_coding	Slc12a5	ENSMUST00000202136	nonsense_mediated_decay		2	1	164968281	1106
ENSMUSG00000027827	protein_coding	Kcnab1	ENSMUST00000160136	processed_transcript		3	1	65297414	534
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000142049	retained_intron		11	-1	120613589	360
ENSMUSG00000093865	protein_coding	Lrit3	ENSMUST00000188978	retained_intron		3	-1	129800521	773
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000160717	protein_coding		8	1	127299585	4214
ENSMUSG00000093865	protein_coding	Lrit3	ENSMUST00000179187	protein_coding	alternative2	3	-1	129804030	1683
ENSMUSG00000025858	protein_coding	Get4	ENSMUST00000130326	protein_coding		5	1	139252370	835
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000145356	retained_intron		11	-1	120614525	727
ENSMUSG00000081200	processed_pseudogene	Gm15615	ENSMUST00000118876	processed_pseudogene		5	-1	32312119	198
ENSMUSG00000027827	protein_coding	Kcnab1	ENSMUST00000161956	retained_intron		3	1	65353767	4382
ENSMUSG00000113794	antisense	Gm36607	ENSMUST00000222750	antisense		13	1	70706233	1087
ENSMUSG00000100396	lincRNA	Gm29367	ENSMUST00000190911	lincRNA		4	1	141875707	1327
ENSMUSG00000033790	protein_coding	Tubgcp5	ENSMUST00000206454	protein_coding		7	1	55794225	306
ENSMUSG00000017740	protein_coding	Slc12a5	ENSMUST00000135918	retained_intron		2	1	164982437	744
ENSMUSG00000099508	lincRNA	1700030L20Rik	ENSMUST00000189233	lincRNA		3	-1	136449349	985
ENSMUSG00000116287	lincRNA	Gm3924	ENSMUST00000230803	lincRNA		15	-1	79051176	612
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000126723	processed_transcript		11	-1	120617913	701
ENSMUSG00000107078	antisense	Gm36840	ENSMUST00000202688	antisense		5	-1	32354883	250
ENSMUSG00000018909	protein_coding	Arrb1	ENSMUST00000032995	protein_coding	principal3	7	1	99535662	3715
ENSMUSG00000033790	protein_coding	Tubgcp5	ENSMUST00000206660	retained_intron		7	1	55804619	3727
ENSMUSG00000090120	antisense	A730090N16Rik	ENSMUST00000160137	antisense		3	-1	65349429	627
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000162456	protein_coding		8	1	127299612	3204
ENSMUSG00000118199	processed_pseudogene	Gm8390	ENSMUST00000237259	processed_pseudogene		18	1	44061598	607
ENSMUSG00000033790	protein_coding	Tubgcp5	ENSMUST00000205779	retained_intron		7	1	55806272	1883
ENSMUSG00000026751	protein_coding	Nr5a1	ENSMUST00000028084	protein_coding	principal1	2	-1	38714542	2947
ENSMUSG00000113771	antisense	Gm36529	ENSMUST00000222495	antisense		13	1	70840451	1529
ENSMUSG00000017740	protein_coding	Slc12a5	ENSMUST00000137302	retained_intron		2	1	164996591	2996
ENSMUSG00000050982	protein_coding	Apol10a	ENSMUST00000060551	protein_coding	principal1	15	1	77477047	3033
ENSMUSG00000033790	protein_coding	Tubgcp5	ENSMUST00000205718	retained_intron		7	1	55817325	430
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000126148	retained_intron		11	-1	120617910	513
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000162035	retained_intron		8	1	127356415	3017
ENSMUSG00000018909	protein_coding	Arrb1	ENSMUST00000162404	protein_coding		7	1	99535704	431
ENSMUSG00000108419	lincRNA	Gm45020	ENSMUST00000205356	lincRNA		7	-1	114948497	381
ENSMUSG00000096988	lincRNA	A930029G22Rik	ENSMUST00000181032	lincRNA		17	-1	69439304	1710
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000162176	protein_coding		8	1	127357311	1266
ENSMUSG00000020357	protein_coding	Flt4	ENSMUST00000020617	protein_coding	principal1	11	1	49609263	6255
ENSMUSG00000025137	protein_coding	Pcyt2	ENSMUST00000160059	retained_intron		11	-1	120617869	597
ENSMUSG00000112362	processed_pseudogene	Gm48507	ENSMUST00000219424	processed_pseudogene		10	1	96711807	280
ENSMUSG00000073374	lincRNA	C030034I22Rik	ENSMUST00000188481	lincRNA		17	1	69417402	4231
ENSMUSG00000033790	protein_coding	Tubgcp5	ENSMUST00000205311	retained_intron		7	1	55821643	931
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000167868	protein_coding	principal1	9	-1	107659528	3151
ENSMUSG00000073374	lincRNA	C030034I22Rik	ENSMUST00000097289	lincRNA		17	1	69417461	1471
ENSMUSG00000025858	protein_coding	Get4	ENSMUST00000138508	protein_coding		5	1	139253497	701
ENSMUSG00000026751	protein_coding	Nr5a1	ENSMUST00000149690	retained_intron		2	-1	38711188	2069
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000163021	retained_intron		8	1	127371490	614
ENSMUSG00000018909	protein_coding	Arrb1	ENSMUST00000161525	protein_coding		7	1	99539669	487
ENSMUSG00000033790	protein_coding	Tubgcp5	ENSMUST00000206133	nonsense_mediated_decay		7	1	55826281	617
ENSMUSG00000101476	antisense	Gm29570	ENSMUST00000185813	antisense		1	1	13376070	681
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000162727	protein_coding		8	1	127389317	622
ENSMUSG00000020357	protein_coding	Flt4	ENSMUST00000152253	processed_transcript		11	1	49609263	3587
ENSMUSG00000068877	protein_coding	Selenbp2	ENSMUST00000090848	protein_coding	principal1	3	1	94693556	1719
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000161348	protein_coding		8	1	127405445	1124
ENSMUSG00000101171	processed_pseudogene	Gm7593	ENSMUST00000187246	processed_pseudogene		1	-1	13407655	644
ENSMUSG00000062036	transcribed_processed_pseudogene	4932415M13Rik	ENSMUST00000184645	processed_transcript		17	1	53716509	3063
ENSMUSG00000025858	protein_coding	Get4	ENSMUST00000110878	protein_coding	alternative2	5	1	139253511	1180
ENSMUSG00000005493	protein_coding	Msh4	ENSMUST00000186220	retained_intron		3	-1	153875504	2156
ENSMUSG00000062036	transcribed_processed_pseudogene	4932415M13Rik	ENSMUST00000184922	transcribed_processed_pseudogene		17	1	53723690	694
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000163002	retained_intron		8	1	127410649	815
ENSMUSG00000018909	protein_coding	Arrb1	ENSMUST00000161268	processed_transcript		7	1	99573064	395
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000159511	protein_coding		8	1	127447746	307
ENSMUSG00000025858	protein_coding	Get4	ENSMUST00000138059	retained_intron		5	1	139266867	390
ENSMUSG00000035278	protein_coding	Plekhj1	ENSMUST00000036805	protein_coding	principal1	10	-1	80798626	1260
ENSMUSG00000005493	protein_coding	Msh4	ENSMUST00000191504	retained_intron		3	-1	153880243	2640
ENSMUSG00000005493	protein_coding	Msh4	ENSMUST00000191606	retained_intron		3	-1	153880243	2664
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000159940	processed_transcript		8	1	127579724	746
ENSMUSG00000025858	protein_coding	Get4	ENSMUST00000124420	retained_intron		5	1	139266931	1167
ENSMUSG00000025509	protein_coding	Pnpla2	ENSMUST00000026583	nonsense_mediated_decay		7	1	141455206	2048
ENSMUSG00000117444	antisense	Gm50020	ENSMUST00000234963	antisense		17	-1	74819911	794
ENSMUSG00000068877	protein_coding	Selenbp2	ENSMUST00000132162	retained_intron		3	1	94693566	1180
ENSMUSG00000005493	protein_coding	Msh4	ENSMUST00000188338	protein_coding	alternative2	3	-1	153904731	2802
ENSMUSG00000035278	protein_coding	Plekhj1	ENSMUST00000219959	protein_coding		10	-1	80796817	537
ENSMUSG00000068877	protein_coding	Selenbp2	ENSMUST00000173981	protein_coding		3	1	94693568	477
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000079777	protein_coding		8	1	127064056	3394
ENSMUSG00000068877	protein_coding	Selenbp2	ENSMUST00000173849	protein_coding		3	1	94693569	1323
ENSMUSG00000005493	protein_coding	Msh4	ENSMUST00000190449	protein_coding	alternative2	3	-1	153904891	3110
ENSMUSG00000025509	protein_coding	Pnpla2	ENSMUST00000064151	protein_coding	principal3	7	1	141455207	1799
ENSMUSG00000027349	protein_coding	Fam98b	ENSMUST00000140936	retained_intron		2	1	117249739	1979
ENSMUSG00000018909	protein_coding	Arrb1	ENSMUST00000162043	retained_intron		7	1	99594593	417
ENSMUSG00000068877	protein_coding	Selenbp2	ENSMUST00000131650	nonsense_mediated_decay		3	1	94693647	599
ENSMUSG00000018909	protein_coding	Arrb1	ENSMUST00000159642	retained_intron		7	1	99594614	434
ENSMUSG00000085424	antisense	Fhad1os1	ENSMUST00000146094	antisense		4	1	141982992	997
ENSMUSG00000073771	protein_coding	Btbd19	ENSMUST00000153924	processed_transcript		4	-1	117122330	1956
ENSMUSG00000018909	protein_coding	Arrb1	ENSMUST00000162933	retained_intron		7	1	99594621	3917
ENSMUSG00000025509	protein_coding	Pnpla2	ENSMUST00000169665	protein_coding		7	1	141455219	985
ENSMUSG00000035278	protein_coding	Plekhj1	ENSMUST00000219767	retained_intron		10	-1	80798560	1261
ENSMUSG00000035278	protein_coding	Plekhj1	ENSMUST00000220093	processed_transcript		10	-1	80797705	734
ENSMUSG00000025509	protein_coding	Pnpla2	ENSMUST00000164924	nonsense_mediated_decay		7	1	141455229	1957
ENSMUSG00000068877	protein_coding	Selenbp2	ENSMUST00000174377	processed_transcript		3	1	94693648	906
ENSMUSG00000018909	protein_coding	Arrb1	ENSMUST00000162290	protein_coding		7	1	99594623	421
ENSMUSG00000073771	protein_coding	Btbd19	ENSMUST00000097915	processed_transcript		4	-1	117122385	1152
ENSMUSG00000025509	protein_coding	Pnpla2	ENSMUST00000165487	protein_coding		7	1	141455607	504
ENSMUSG00000035278	protein_coding	Plekhj1	ENSMUST00000220002	retained_intron		10	-1	80797901	564
ENSMUSG00000068877	protein_coding	Selenbp2	ENSMUST00000174223	protein_coding		3	1	94693659	402
ENSMUSG00000025509	protein_coding	Pnpla2	ENSMUST00000169723	retained_intron		7	1	141457018	920
ENSMUSG00000025812	protein_coding	Pard3	ENSMUST00000108752	protein_coding		8	1	127306310	3497
ENSMUSG00000073771	protein_coding	Btbd19	ENSMUST00000183310	protein_coding	principal1	4	-1	117125618	1620
ENSMUSG00000018909	protein_coding	Arrb1	ENSMUST00000179755	protein_coding		7	1	99535466	7135
ENSMUSG00000108850	TEC	Gm44914	ENSMUST00000207191	TEC		7	-1	99570840	2720
ENSMUSG00000035278	protein_coding	Plekhj1	ENSMUST00000219378	nonsense_mediated_decay		10	-1	80798294	533
ENSMUSG00000074259	protein_coding	Gramd2	ENSMUST00000123914	protein_coding		9	1	59680144	805
ENSMUSG00000019433	protein_coding	Gipc1	ENSMUST00000019577	protein_coding	principal1	8	1	83652677	1522
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000024748	protein_coding	principal1	17	1	46161032	2966
ENSMUSG00000005687	protein_coding	Bcas2	ENSMUST00000005830	protein_coding	principal1	3	1	103171655	1467
ENSMUSG00000107898	unprocessed_pseudogene	Gm27013	ENSMUST00000205067	unprocessed_pseudogene		6	-1	130697981	1436
ENSMUSG00000073771	protein_coding	Btbd19	ENSMUST00000125896	processed_transcript		4	-1	117122359	421
ENSMUSG00000035278	protein_coding	Plekhj1	ENSMUST00000218209	protein_coding		10	-1	80798459	511
ENSMUSG00000075115	protein_coding	Olfr1200	ENSMUST00000217588	protein_coding	principal1	2	-1	88770488	4996
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000010208	protein_coding	principal1	9	-1	107667374	2585
ENSMUSG00000075115	protein_coding	Olfr1200	ENSMUST00000099811	protein_coding	principal1	2	-1	88768313	1011
ENSMUSG00000073771	protein_coding	Btbd19	ENSMUST00000153303	retained_intron		4	-1	117121265	451
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000164338	processed_transcript		17	1	46161049	413
ENSMUSG00000024728	protein_coding	Ms4a19	ENSMUST00000181284	protein_coding		19	-1	11159178	562
ENSMUSG00000035278	protein_coding	Plekhj1	ENSMUST00000217735	retained_intron		10	-1	80798194	496
ENSMUSG00000019433	protein_coding	Gipc1	ENSMUST00000211985	protein_coding		8	1	83652686	370
ENSMUSG00000073771	protein_coding	Btbd19	ENSMUST00000181979	retained_intron		4	-1	117121877	1149
ENSMUSG00000100439	processed_pseudogene	Gm28922	ENSMUST00000189785	processed_pseudogene		1	-1	65470508	308
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000172170	protein_coding		17	1	46161066	2587
ENSMUSG00000026535	protein_coding	Ifi202b	ENSMUST00000000266	protein_coding	principal1	1	-1	173982744	1697
ENSMUSG00000108104	processed_pseudogene	Gm20997	ENSMUST00000205148	processed_pseudogene		6	-1	130721618	231
ENSMUSG00000019433	protein_coding	Gipc1	ENSMUST00000212463	protein_coding		8	1	83652698	476
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000166563	protein_coding		17	1	46161111	330
ENSMUSG00000027349	protein_coding	Fam98b	ENSMUST00000028825	protein_coding	principal1	2	1	117249739	1861
ENSMUSG00000059023	protein_coding	Olfr1201	ENSMUST00000214018	processed_transcript		2	1	88793036	837
ENSMUSG00000107934	processed_pseudogene	Gm17822	ENSMUST00000204307	processed_pseudogene		6	-1	95240578	351
ENSMUSG00000059023	protein_coding	Olfr1201	ENSMUST00000216213	protein_coding	principal1	2	1	88793036	2602
ENSMUSG00000024728	protein_coding	Ms4a19	ENSMUST00000181567	protein_coding		19	-1	11165306	578
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000165686	processed_transcript		17	1	46161161	608
ENSMUSG00000117211	processed_pseudogene	Gm49917	ENSMUST00000233753	processed_pseudogene		17	1	53734511	347
ENSMUSG00000107900	processed_pseudogene	Gm5723	ENSMUST00000203096	processed_pseudogene		6	1	95250301	432
ENSMUSG00000098015	transcribed_unprocessed_pseudogene	Gm44527	ENSMUST00000182210	processed_transcript		6	-1	130747623	2945
ENSMUSG00000027349	protein_coding	Fam98b	ENSMUST00000143612	processed_transcript		2	1	117258782	641
ENSMUSG00000073771	protein_coding	Btbd19	ENSMUST00000143213	nonsense_mediated_decay		4	-1	117125725	597
ENSMUSG00000098015	transcribed_unprocessed_pseudogene	Gm44527	ENSMUST00000204519	transcribed_unprocessed_pseudogene		6	-1	130746227	1314
ENSMUSG00000059023	protein_coding	Olfr1201	ENSMUST00000073458	protein_coding	principal1	2	1	88794384	924
ENSMUSG00000072812	protein_coding	Ahnak2	ENSMUST00000128258	protein_coding		12	-1	112777636	5443
ENSMUSG00000108065	processed_pseudogene	Gm18423	ENSMUST00000205144	processed_pseudogene		6	1	130776236	1074
ENSMUSG00000084152	processed_pseudogene	Gm11617	ENSMUST00000119609	processed_pseudogene		11	1	101306742	639
ENSMUSG00000098071	unprocessed_pseudogene	Gm44525	ENSMUST00000183129	unprocessed_pseudogene		6	-1	130799987	2634
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000171901	processed_transcript		17	1	46161295	450
ENSMUSG00000072812	protein_coding	Ahnak2	ENSMUST00000137195	protein_coding	principal5	12	-1	112781011	3377
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000167404	retained_intron		17	1	46163033	759
ENSMUSG00000064084	protein_coding	Olfr1202	ENSMUST00000214703	protein_coding	principal1	2	1	88814496	3665
ENSMUSG00000024728	protein_coding	Ms4a19	ENSMUST00000180678	protein_coding		19	-1	11165306	658
ENSMUSG00000073771	protein_coding	Btbd19	ENSMUST00000153257	nonsense_mediated_decay		4	-1	117125658	710
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000169955	processed_transcript		17	1	46163226	857
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000194895	retained_intron		9	-1	107669003	3133
ENSMUSG00000005687	protein_coding	Bcas2	ENSMUST00000136937	retained_intron		3	1	103171703	3878
ENSMUSG00000064084	protein_coding	Olfr1202	ENSMUST00000217059	protein_coding	principal1	2	1	88814795	1153
ENSMUSG00000073771	protein_coding	Btbd19	ENSMUST00000123346	processed_transcript		4	-1	117125166	345
ENSMUSG00000036104	protein_coding	Rab3gap1	ENSMUST00000037649	protein_coding	principal2	1	1	127868773	4243
ENSMUSG00000064084	protein_coding	Olfr1202	ENSMUST00000072057	protein_coding	principal1	2	1	88817173	930
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000169918	retained_intron		17	1	46163318	1035
ENSMUSG00000114703	processed_pseudogene	Gm47776	ENSMUST00000225140	processed_pseudogene		13	-1	114935068	427
ENSMUSG00000104653	antisense	Gm43109	ENSMUST00000198269	antisense		3	1	116128451	753
ENSMUSG00000005687	protein_coding	Bcas2	ENSMUST00000139489	retained_intron		3	1	103171749	2717
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000193932	protein_coding	principal1	9	-1	107667426	2463
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000169778	retained_intron		17	1	46165696	826
ENSMUSG00000036104	protein_coding	Rab3gap1	ENSMUST00000186865	processed_transcript		1	1	127868789	1950
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000163941	retained_intron		17	1	46165778	838
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000177567	protein_coding	principal1	9	-1	107668968	2456
ENSMUSG00000016257	protein_coding	Prelid3b	ENSMUST00000016401	protein_coding	principal1	2	-1	174473081	1553
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000166252	nonsense_mediated_decay		17	1	46166431	382
ENSMUSG00000072812	protein_coding	Ahnak2	ENSMUST00000124526	protein_coding		12	-1	112802657	5347
ENSMUSG00000036104	protein_coding	Rab3gap1	ENSMUST00000142662	retained_intron		1	1	127868802	854
ENSMUSG00000024728	protein_coding	Ms4a19	ENSMUST00000078770	protein_coding	principal1	19	-1	11165320	650
ENSMUSG00000036104	protein_coding	Rab3gap1	ENSMUST00000212506	protein_coding	alternative2	1	1	127868812	2967
ENSMUSG00000005687	protein_coding	Bcas2	ENSMUST00000155520	nonsense_mediated_decay		3	1	103171762	737
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000169798	retained_intron		17	1	46166867	824
ENSMUSG00000072812	protein_coding	Ahnak2	ENSMUST00000101010	protein_coding	alternative2	12	-1	112775254	2821
ENSMUSG00000036104	protein_coding	Rab3gap1	ENSMUST00000150945	retained_intron		1	1	127900913	3049
ENSMUSG00000051256	protein_coding	Jagn1	ENSMUST00000101070	protein_coding	principal1	6	1	113442569	1201
ENSMUSG00000016257	protein_coding	Prelid3b	ENSMUST00000117442	protein_coding		2	-1	174472898	683
ENSMUSG00000036104	protein_coding	Rab3gap1	ENSMUST00000189259	retained_intron		1	1	127923073	3195
ENSMUSG00000005687	protein_coding	Bcas2	ENSMUST00000135017	nonsense_mediated_decay		3	1	103171772	1405
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000195739	nonsense_mediated_decay		9	-1	107656642	703
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000167681	retained_intron		17	1	46166988	638
ENSMUSG00000005687	protein_coding	Bcas2	ENSMUST00000147042	retained_intron		3	1	103171785	535
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000181983	protein_coding		12	1	83631236	2046
ENSMUSG00000016257	protein_coding	Prelid3b	ENSMUST00000120822	protein_coding		2	-1	174472934	622
ENSMUSG00000036104	protein_coding	Rab3gap1	ENSMUST00000131884	processed_transcript		1	1	127938205	708
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000192211	nonsense_mediated_decay		9	-1	107656229	641
ENSMUSG00000051256	protein_coding	Jagn1	ENSMUST00000204287	retained_intron		6	1	113442595	2414
ENSMUSG00000051256	protein_coding	Jagn1	ENSMUST00000204254	protein_coding		6	1	113442610	1147
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000166701	protein_coding		17	1	46167231	833
ENSMUSG00000038679	protein_coding	Trps1	ENSMUST00000165201	protein_coding	principal3	15	-1	50889691	9859
ENSMUSG00000092568	unprocessed_pseudogene	Olfr759-ps1	ENSMUST00000174238	unprocessed_pseudogene		17	-1	37408533	700
ENSMUSG00000016257	protein_coding	Prelid3b	ENSMUST00000147944	retained_intron		2	-1	174472891	394
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000194230	retained_intron		9	-1	107656020	614
ENSMUSG00000023952	protein_coding	Gtpbp2	ENSMUST00000166663	retained_intron		17	1	46167636	520
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000195033	retained_intron		9	-1	107657261	780
ENSMUSG00000016257	protein_coding	Prelid3b	ENSMUST00000141100	protein_coding		2	-1	174472931	355
ENSMUSG00000084401	unprocessed_pseudogene	Gm12586	ENSMUST00000117328	unprocessed_pseudogene		11	1	121856773	1316
ENSMUSG00000038679	protein_coding	Trps1	ENSMUST00000184458	protein_coding		15	-1	50889713	5293
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000191923	processed_transcript		9	-1	107659219	731
ENSMUSG00000096135	processed_pseudogene	Rps12-ps18	ENSMUST00000179420	processed_pseudogene		X	-1	124856127	399
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000192323	protein_coding		9	-1	107669530	696
ENSMUSG00000101189	lincRNA	1700029M03Rik	ENSMUST00000187300	lincRNA		1	1	164960921	444
ENSMUSG00000038679	protein_coding	Trps1	ENSMUST00000183757	protein_coding	alternative2	15	-1	50889049	6202
ENSMUSG00000021583	protein_coding	Erap1	ENSMUST00000169114	protein_coding	principal1	13	1	74639568	5644
ENSMUSG00000076912	TR_J_gene	Traj17	ENSMUST00000103724	TR_J_gene	principal1	14	1	54201775	63
ENSMUSG00000118442	lincRNA	Gm50465	ENSMUST00000238655	lincRNA		X	1	124884339	174
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000182004	protein_coding		12	1	83631339	503
ENSMUSG00000074259	protein_coding	Gramd2	ENSMUST00000128944	protein_coding	alternative2	9	1	59707637	3705
ENSMUSG00000080158	processed_pseudogene	Gm14385	ENSMUST00000116315	processed_pseudogene		2	-1	174485576	876
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000192990	protein_coding		9	-1	107669000	691
ENSMUSG00000082353	processed_pseudogene	Vmn1r-ps1	ENSMUST00000118738	processed_pseudogene		2	1	174591230	573
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000195843	protein_coding		9	-1	107665461	638
ENSMUSG00000101189	lincRNA	1700029M03Rik	ENSMUST00000187517	lincRNA		1	1	164960923	357
ENSMUSG00000086684	lincRNA	Gm12590	ENSMUST00000134226	lincRNA		11	-1	121883863	404
ENSMUSG00000038679	protein_coding	Trps1	ENSMUST00000183997	protein_coding		15	-1	50889046	3627
ENSMUSG00000082947	processed_pseudogene	Gm12587	ENSMUST00000120180	processed_pseudogene		11	-1	121886968	427
ENSMUSG00000010064	protein_coding	Slc38a3	ENSMUST00000193495	processed_transcript		9	-1	107669013	624
ENSMUSG00000095283	lincRNA	Astx1b	ENSMUST00000178608	lincRNA		X	1	124911237	1150
ENSMUSG00000074259	protein_coding	Gramd2	ENSMUST00000098661	protein_coding	principal2	9	1	59707764	1368
ENSMUSG00000038679	protein_coding	Trps1	ENSMUST00000184885	protein_coding		15	-1	50882806	3492
ENSMUSG00000095017	processed_pseudogene	Rps12-ps15	ENSMUST00000179567	processed_pseudogene		X	-1	124973948	399
ENSMUSG00000063651	protein_coding	Cnfn	ENSMUST00000167591	protein_coding	alternative1	7	-1	25369703	698
ENSMUSG00000038679	protein_coding	Trps1	ENSMUST00000183421	protein_coding		15	-1	50827521	3446
ENSMUSG00000076913	TR_J_gene	Traj16	ENSMUST00000103725	TR_J_gene	principal1	14	1	54203134	61
ENSMUSG00000021583	protein_coding	Erap1	ENSMUST00000220594	retained_intron		13	1	74639853	3009
ENSMUSG00000061039	protein_coding	Olfr920	ENSMUST00000074740	protein_coding	principal1	9	1	38752299	5711
ENSMUSG00000118468	lincRNA	Gm17361	ENSMUST00000238551	lincRNA		X	1	125004157	174
ENSMUSG00000038679	protein_coding	Trps1	ENSMUST00000185183	protein_coding		15	-1	50890463	887
ENSMUSG00000074259	protein_coding	Gramd2	ENSMUST00000133822	retained_intron		9	1	59710157	729
ENSMUSG00000082831	unprocessed_pseudogene	Gm12591	ENSMUST00000122407	unprocessed_pseudogene		11	-1	121970685	1177
ENSMUSG00000118468	lincRNA	Gm17361	ENSMUST00000238354	lincRNA		X	1	125004163	499
ENSMUSG00000021583	protein_coding	Erap1	ENSMUST00000221822	protein_coding		13	1	74639855	366
ENSMUSG00000118468	lincRNA	Gm17361	ENSMUST00000238691	lincRNA		X	1	125004163	498
ENSMUSG00000029600	protein_coding	Rita1	ENSMUST00000111884	protein_coding		5	-1	120612339	733
ENSMUSG00000074259	protein_coding	Gramd2	ENSMUST00000129129	protein_coding		9	1	59711181	706
ENSMUSG00000118470	lincRNA	Gm50485	ENSMUST00000238529	lincRNA		X	1	125315732	499
ENSMUSG00000029600	protein_coding	Rita1	ENSMUST00000156356	protein_coding		5	-1	120611637	712
ENSMUSG00000063651	protein_coding	Cnfn	ENSMUST00000076276	protein_coding	principal3	7	-1	25369724	524
ENSMUSG00000074259	protein_coding	Gramd2	ENSMUST00000143224	retained_intron		9	1	59714116	4579
ENSMUSG00000021583	protein_coding	Erap1	ENSMUST00000221526	protein_coding		13	1	74639873	354
ENSMUSG00000038679	protein_coding	Trps1	ENSMUST00000077935	protein_coding	principal3	15	-1	50890041	4436
ENSMUSG00000092477	unprocessed_pseudogene	Gm18808	ENSMUST00000173316	unprocessed_pseudogene		17	-1	37415123	462
ENSMUSG00000118475	lincRNA	Gm21616	ENSMUST00000238269	lincRNA		X	1	125435542	499
ENSMUSG00000021583	protein_coding	Erap1	ENSMUST00000221606	retained_intron		13	1	74663467	420
ENSMUSG00000118475	lincRNA	Gm21616	ENSMUST00000238246	lincRNA		X	1	125435542	498
ENSMUSG00000021583	protein_coding	Erap1	ENSMUST00000222127	protein_coding		13	1	74666099	660
ENSMUSG00000102408	lincRNA	4930568G15Rik	ENSMUST00000193317	lincRNA		1	-1	165068114	3218
ENSMUSG00000095137	processed_pseudogene	Rps12-ps17	ENSMUST00000179067	processed_pseudogene		X	-1	125548171	399
ENSMUSG00000113015	processed_pseudogene	Gm6296	ENSMUST00000222599	processed_pseudogene		13	-1	74768861	943
ENSMUSG00000029600	protein_coding	Rita1	ENSMUST00000147596	processed_transcript		5	-1	120605717	650
ENSMUSG00000032086	protein_coding	Bace1	ENSMUST00000078111	protein_coding		9	1	45838580	4041
ENSMUSG00000102408	lincRNA	4930568G15Rik	ENSMUST00000195635	lincRNA		1	-1	165091928	996
ENSMUSG00000111582	unprocessed_pseudogene	Gm47347	ENSMUST00000217321	unprocessed_pseudogene		9	1	38762909	114
ENSMUSG00000051435	protein_coding	Fhad1	ENSMUST00000105780	protein_coding	principal1	4	-1	142015067	4809
ENSMUSG00000059687	protein_coding	Olfr108	ENSMUST00000078207	protein_coding	alternative2	17	1	37445480	1038
ENSMUSG00000059687	protein_coding	Olfr108	ENSMUST00000218675	protein_coding	principal2	17	1	37445480	1038
ENSMUSG00000020525	protein_coding	Ppm1d	ENSMUST00000020835	protein_coding	principal1	11	1	85311244	2899
ENSMUSG00000051652	protein_coding	Lrrc3	ENSMUST00000057608	protein_coding	principal1	10	-1	77902536	4296
ENSMUSG00000098153	processed_pseudogene	Gm27024	ENSMUST00000182561	processed_pseudogene		3	-1	103180443	755
ENSMUSG00000050600	protein_coding	Zfp831	ENSMUST00000059452	protein_coding	principal1	2	1	174643534	9807
ENSMUSG00000104976	processed_pseudogene	Gm43060	ENSMUST00000200621	processed_pseudogene		3	-1	103247263	289
ENSMUSG00000020525	protein_coding	Ppm1d	ENSMUST00000127717	protein_coding		11	1	85312164	767
ENSMUSG00000049538	protein_coding	Adamts16	ENSMUST00000080145	protein_coding	principal1	13	-1	70841811	4981
ENSMUSG00000051435	protein_coding	Fhad1	ENSMUST00000137618	processed_transcript		4	-1	141922426	865
ENSMUSG00000118432	lincRNA	Gm50486	ENSMUST00000238299	lincRNA		X	1	125578770	499
ENSMUSG00000089967	processed_pseudogene	Gm16550	ENSMUST00000162550	processed_pseudogene		1	-1	165148949	126
ENSMUSG00000096508	protein_coding	Gm7903	ENSMUST00000113172	protein_coding	principal2	X	1	135433835	3677
ENSMUSG00000051435	protein_coding	Fhad1	ENSMUST00000036701	protein_coding		4	-1	141933089	1366
ENSMUSG00000029600	protein_coding	Rita1	ENSMUST00000136070	processed_transcript		5	-1	120612589	870
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000048155	protein_coding	principal1	12	1	83632252	4226
ENSMUSG00000096508	protein_coding	Gm7903	ENSMUST00000179953	protein_coding	alternative2	X	1	135433835	3519
ENSMUSG00000087016	sense_intronic	Gm15979	ENSMUST00000149741	sense_intronic		4	-1	135430841	590
ENSMUSG00000094540	lincRNA	Astx4c	ENSMUST00000178390	lincRNA		X	1	125605682	1149
ENSMUSG00000049538	protein_coding	Adamts16	ENSMUST00000123552	nonsense_mediated_decay		13	-1	70841775	5106
ENSMUSG00000096763	processed_pseudogene	Rps12-ps13	ENSMUST00000178365	processed_pseudogene		X	-1	125675231	399
ENSMUSG00000049538	protein_coding	Adamts16	ENSMUST00000109694	protein_coding		13	-1	70841811	3378
ENSMUSG00000094371	unprocessed_pseudogene	Gm7905	ENSMUST00000119933	unprocessed_pseudogene		X	1	135470455	1386
ENSMUSG00000032086	protein_coding	Bace1	ENSMUST00000034591	protein_coding	principal1	9	1	45838580	6058
ENSMUSG00000118484	lincRNA	Gm17693	ENSMUST00000238302	lincRNA		X	1	125705444	499
ENSMUSG00000049538	protein_coding	Adamts16	ENSMUST00000130726	retained_intron		13	-1	70841808	1960
ENSMUSG00000029600	protein_coding	Rita1	ENSMUST00000031599	protein_coding	principal1	5	-1	120612589	1573
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000112992	protein_coding		2	1	35622160	6184
ENSMUSG00000118484	lincRNA	Gm17693	ENSMUST00000238594	lincRNA		X	1	125705444	498
ENSMUSG00000051435	protein_coding	Fhad1	ENSMUST00000129192	processed_transcript		4	-1	141952076	838
ENSMUSG00000055095	protein_coding	Spink6	ENSMUST00000068473	protein_coding		18	1	44071393	588
ENSMUSG00000034837	protein_coding	Gnat1	ENSMUST00000010205	protein_coding	principal1	9	-1	107679712	2328
ENSMUSG00000051435	protein_coding	Fhad1	ENSMUST00000124125	processed_transcript		4	-1	141954194	676
ENSMUSG00000032086	protein_coding	Bace1	ENSMUST00000159499	nonsense_mediated_decay		9	1	45839240	365
ENSMUSG00000032086	protein_coding	Bace1	ENSMUST00000162559	processed_transcript		9	1	45839918	295
ENSMUSG00000095008	lincRNA	Astx1c	ENSMUST00000177724	lincRNA		X	1	125735043	1150
ENSMUSG00000055095	protein_coding	Spink6	ENSMUST00000236634	protein_coding	principal1	18	1	44071422	318
ENSMUSG00000095499	processed_pseudogene	Rps12-ps14	ENSMUST00000179356	processed_pseudogene		X	-1	125858081	399
ENSMUSG00000055095	protein_coding	Spink6	ENSMUST00000235436	protein_coding		18	1	44073768	383
ENSMUSG00000029600	protein_coding	Rita1	ENSMUST00000140554	protein_coding		5	-1	120612570	796
ENSMUSG00000029600	protein_coding	Rita1	ENSMUST00000177800	protein_coding	principal1	5	-1	120612589	1668
ENSMUSG00000118464	lincRNA	Gm17522	ENSMUST00000186631	lincRNA		X	1	125888197	174
ENSMUSG00000045333	protein_coding	Zfp423	ENSMUST00000165770	protein_coding	alternative1	8	-1	87804439	4334
ENSMUSG00000051435	protein_coding	Fhad1	ENSMUST00000123068	retained_intron		4	-1	142015082	2224
ENSMUSG00000055095	protein_coding	Spink6	ENSMUST00000237636	retained_intron		18	1	44074279	432
ENSMUSG00000094342	lincRNA	Gm17522	ENSMUST00000238604	lincRNA		X	1	125888203	499
ENSMUSG00000094342	lincRNA	Gm17522	ENSMUST00000178144	lincRNA		X	1	125888203	498
ENSMUSG00000032086	protein_coding	Bace1	ENSMUST00000159970	retained_intron		9	1	45852723	3146
ENSMUSG00000051435	protein_coding	Fhad1	ENSMUST00000125293	processed_transcript		4	-1	142015039	241
ENSMUSG00000032086	protein_coding	Bace1	ENSMUST00000162587	protein_coding		9	1	45854627	1148
ENSMUSG00000022510	protein_coding	Trp63	ENSMUST00000115310	protein_coding	alternative1	16	1	25683765	5366
ENSMUSG00000111128	TEC	Gm49338	ENSMUST00000216609	TEC		9	-1	45860682	2079
ENSMUSG00000051435	protein_coding	Fhad1	ENSMUST00000105779	protein_coding	principal1	4	-1	142011637	4263
ENSMUSG00000026572	protein_coding	Tbx19	ENSMUST00000027859	protein_coding	principal1	1	-1	165160773	2660
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000006381	protein_coding	principal1	4	-1	141598224	3101
ENSMUSG00000054994	protein_coding	AV320801	ENSMUST00000068340	protein_coding	principal1	X	1	135494588	3698
ENSMUSG00000096897	lincRNA	Astx4d	ENSMUST00000123136	lincRNA		X	1	125917810	1149
ENSMUSG00000094286	processed_pseudogene	Gm12424	ENSMUST00000179673	processed_pseudogene		4	1	47101032	447
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000105784	protein_coding	principal1	4	-1	141599924	3036
ENSMUSG00000059713	protein_coding	Rcan3	ENSMUST00000132654	protein_coding		4	-1	135425267	583
ENSMUSG00000085922	antisense	Fhad1os2	ENSMUST00000152351	antisense		4	1	141885654	945
ENSMUSG00000081079	processed_pseudogene	Gm13059	ENSMUST00000119881	processed_pseudogene		4	1	141976779	398
ENSMUSG00000112588	processed_pseudogene	Gm6859	ENSMUST00000218614	processed_pseudogene		10	-1	96769828	989
ENSMUSG00000112293	processed_pseudogene	Gm48509	ENSMUST00000219071	processed_pseudogene		10	1	96798388	337
ENSMUSG00000086685	processed_transcript	Gm15015	ENSMUST00000135491	processed_transcript		X	1	135519591	636
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000156669	protein_coding		2	1	35710327	4014
ENSMUSG00000026572	protein_coding	Tbx19	ENSMUST00000161777	processed_transcript		1	-1	165149694	1069
ENSMUSG00000026572	protein_coding	Tbx19	ENSMUST00000161144	protein_coding		1	-1	165153726	971
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000182618	protein_coding		12	1	83632253	765
ENSMUSG00000027524	protein_coding	Edn3	ENSMUST00000162473	processed_transcript		2	1	174769922	1437
ENSMUSG00000111912	lincRNA	Gm48521	ENSMUST00000218446	lincRNA		10	1	96801039	3474
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000141518	protein_coding		4	-1	141599835	689
ENSMUSG00000096119	transcribed_unprocessed_pseudogene	Gm6228	ENSMUST00000178856	transcribed_unprocessed_pseudogene		X	1	135549210	1386
ENSMUSG00000027962	protein_coding	Vcam1	ENSMUST00000029574	protein_coding	principal1	3	-1	116129688	3469
ENSMUSG00000026572	protein_coding	Tbx19	ENSMUST00000160350	processed_transcript		1	-1	165149379	564
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000183154	protein_coding		12	1	83632257	608
ENSMUSG00000009035	protein_coding	Tmem184b	ENSMUST00000074991	protein_coding	principal2	15	-1	79403569	3627
ENSMUSG00000029601	protein_coding	Iqcd	ENSMUST00000069259	protein_coding	alternative2	5	1	120589016	1577
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000182036	protein_coding		12	1	83632291	788
ENSMUSG00000027962	protein_coding	Vcam1	ENSMUST00000197031	retained_intron		3	-1	116120715	4088
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000182347	protein_coding		12	1	83632306	548
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000156465	retained_intron		2	1	35661350	464
ENSMUSG00000009035	protein_coding	Tmem184b	ENSMUST00000178522	protein_coding	principal2	15	-1	79402919	3314
ENSMUSG00000059713	protein_coding	Rcan3	ENSMUST00000030606	protein_coding	principal1	4	-1	135433853	5111
ENSMUSG00000049926	protein_coding	Olfr921	ENSMUST00000217114	protein_coding	principal1	9	1	38773068	4120
ENSMUSG00000027962	protein_coding	Vcam1	ENSMUST00000196449	protein_coding		3	-1	116129457	2532
ENSMUSG00000059713	protein_coding	Rcan3	ENSMUST00000156635	protein_coding		4	-1	135433823	724
ENSMUSG00000027962	protein_coding	Vcam1	ENSMUST00000196309	protein_coding		3	-1	116128928	749
ENSMUSG00000051705	protein_coding	Senp8	ENSMUST00000051039	protein_coding	principal3	9	-1	59750649	3682
ENSMUSG00000009035	protein_coding	Tmem184b	ENSMUST00000228002	protein_coding	alternative1	15	-1	79403256	3315
ENSMUSG00000106327	processed_pseudogene	Ckb-ps2	ENSMUST00000198886	processed_pseudogene		17	1	53746117	1001
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000130181	protein_coding		4	-1	141606037	956
ENSMUSG00000009035	protein_coding	Tmem184b	ENSMUST00000231076	protein_coding		15	-1	79403239	784
ENSMUSG00000029601	protein_coding	Iqcd	ENSMUST00000094391	protein_coding	principal2	5	1	120589023	1673
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000087181	protein_coding		5	1	73481000	4117
ENSMUSG00000057447	protein_coding	Olfr1205	ENSMUST00000215929	protein_coding	principal1	2	1	88829737	6149
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000182633	nonsense_mediated_decay		12	1	83632326	1116
ENSMUSG00000049926	protein_coding	Olfr921	ENSMUST00000213958	protein_coding	principal1	9	1	38773088	4012
ENSMUSG00000052760	protein_coding	A630001G21Rik	ENSMUST00000159320	processed_transcript		1	-1	85736581	1798
ENSMUSG00000057447	protein_coding	Olfr1205	ENSMUST00000076438	protein_coding	principal1	2	1	88831119	924
ENSMUSG00000099819	processed_pseudogene	Gm28728	ENSMUST00000189087	processed_pseudogene		1	-1	65524075	405
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000182881	retained_intron		12	1	83634770	4608
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000153189	protein_coding		4	-1	141606096	764
ENSMUSG00000009035	protein_coding	Tmem184b	ENSMUST00000226929	retained_intron		15	-1	79369993	753
ENSMUSG00000107975	processed_pseudogene	Gm44118	ENSMUST00000204665	processed_pseudogene		6	1	130825832	229
ENSMUSG00000051705	protein_coding	Senp8	ENSMUST00000163586	protein_coding	principal3	9	-1	59750638	3570
ENSMUSG00000009035	protein_coding	Tmem184b	ENSMUST00000228472	protein_coding		15	-1	79396856	601
ENSMUSG00000034837	protein_coding	Gnat1	ENSMUST00000194802	retained_intron		9	-1	107679634	2354
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000147764	protein_coding		4	-1	141598517	593
ENSMUSG00000114030	processed_pseudogene	Gm18921	ENSMUST00000221798	processed_pseudogene		12	-1	119067430	366
ENSMUSG00000027524	protein_coding	Edn3	ENSMUST00000029030	protein_coding	principal2	2	1	174760619	3117
ENSMUSG00000009035	protein_coding	Tmem184b	ENSMUST00000229003	retained_intron		15	-1	79403276	625
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000147785	protein_coding		4	-1	141600032	536
ENSMUSG00000034837	protein_coding	Gnat1	ENSMUST00000195849	retained_intron		9	-1	107676441	725
ENSMUSG00000049926	protein_coding	Olfr921	ENSMUST00000071681	protein_coding	principal1	9	1	38775174	1181
ENSMUSG00000082565	processed_pseudogene	Gm5255	ENSMUST00000120125	processed_pseudogene		1	-1	65551237	642
ENSMUSG00000009035	protein_coding	Tmem184b	ENSMUST00000229049	protein_coding		15	-1	79402975	361
ENSMUSG00000091650	protein_coding	Apol11a	ENSMUST00000172191	protein_coding	principal1	15	1	77508271	1864
ENSMUSG00000045333	protein_coding	Zfp423	ENSMUST00000109655	protein_coding	principal3	8	-1	87959595	4907
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000137491	processed_transcript		4	-1	141596469	907
ENSMUSG00000082774	processed_pseudogene	Gm8805	ENSMUST00000117848	processed_pseudogene		1	1	65552682	313
ENSMUSG00000027524	protein_coding	Edn3	ENSMUST00000140908	protein_coding	alternative2	2	1	174760799	731
ENSMUSG00000107557	processed_pseudogene	Gm21940	ENSMUST00000204940	processed_pseudogene		6	-1	130840382	2278
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000127455	protein_coding		4	-1	141599888	373
ENSMUSG00000092601	unprocessed_pseudogene	Olfr760-ps1	ENSMUST00000172563	unprocessed_pseudogene		17	-1	37452230	748
ENSMUSG00000027524	protein_coding	Edn3	ENSMUST00000137369	retained_intron		2	1	174761052	1721
ENSMUSG00000045333	protein_coding	Zfp423	ENSMUST00000052250	protein_coding		8	-1	87895735	4510
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000129602	protein_coding		4	-1	141598224	480
ENSMUSG00000103588	unprocessed_pseudogene	Gm18445	ENSMUST00000195502	unprocessed_pseudogene		1	-1	174001972	774
ENSMUSG00000045333	protein_coding	Zfp423	ENSMUST00000174764	protein_coding		8	-1	87953862	746
ENSMUSG00000096437	processed_pseudogene	Rps12-ps16	ENSMUST00000118529	processed_pseudogene		X	-1	125987364	399
ENSMUSG00000098137	transcribed_unprocessed_pseudogene	Gm33962	ENSMUST00000182643	transcribed_unprocessed_pseudogene		6	-1	130887542	2592
ENSMUSG00000034837	protein_coding	Gnat1	ENSMUST00000195129	processed_transcript		9	-1	107678425	754
ENSMUSG00000051705	protein_coding	Senp8	ENSMUST00000216329	protein_coding	alternative2	9	-1	59750627	1559
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000131317	protein_coding		4	-1	141598206	550
ENSMUSG00000105075	processed_pseudogene	Mark1-ps2	ENSMUST00000197823	processed_pseudogene		17	1	53774759	384
ENSMUSG00000098137	transcribed_unprocessed_pseudogene	Gm33962	ENSMUST00000205195	processed_transcript		6	-1	130888691	630
ENSMUSG00000107575	processed_pseudogene	Gm44128	ENSMUST00000204909	processed_pseudogene		6	-1	130911389	219
ENSMUSG00000118418	lincRNA	Gm17267	ENSMUST00000238549	lincRNA		X	1	126017557	499
ENSMUSG00000107522	processed_pseudogene	Gm44988	ENSMUST00000203835	processed_pseudogene		6	-1	130940408	1161
ENSMUSG00000034837	protein_coding	Gnat1	ENSMUST00000193188	retained_intron		9	-1	107679614	717
ENSMUSG00000045333	protein_coding	Zfp423	ENSMUST00000174249	protein_coding		8	-1	87803823	371
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000123150	protein_coding		4	-1	141606025	352
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000108909	protein_coding		15	1	100870904	11436
ENSMUSG00000034837	protein_coding	Gnat1	ENSMUST00000192271	nonsense_mediated_decay		9	-1	107679585	782
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000183128	retained_intron		12	1	83642554	576
ENSMUSG00000034837	protein_coding	Gnat1	ENSMUST00000194153	processed_transcript		9	-1	107678335	525
ENSMUSG00000054160	protein_coding	Nkx2-4	ENSMUST00000067020	protein_coding	principal1	2	-1	147085445	1725
ENSMUSG00000051705	protein_coding	Senp8	ENSMUST00000217093	protein_coding	principal3	9	-1	59750638	1663
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000136831	protein_coding		4	-1	141606036	375
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000201549	protein_coding	principal5	15	1	100870945	7120
ENSMUSG00000095563	lincRNA	Astx3	ENSMUST00000123508	lincRNA		X	1	126042545	1150
ENSMUSG00000102375	TEC	A930036K24Rik	ENSMUST00000194146	TEC		9	1	107680082	1200
ENSMUSG00000083294	unprocessed_pseudogene	Gm14957	ENSMUST00000121069	unprocessed_pseudogene		X	-1	126171027	817
ENSMUSG00000045333	protein_coding	Zfp423	ENSMUST00000173725	processed_transcript		8	-1	87944052	696
ENSMUSG00000045333	protein_coding	Zfp423	ENSMUST00000173092	processed_transcript		8	-1	87948731	386
ENSMUSG00000051705	protein_coding	Senp8	ENSMUST00000213257	protein_coding		9	-1	59750622	764
ENSMUSG00000031212	protein_coding	Pgr15l	ENSMUST00000033556	protein_coding	principal1	X	1	97072596	5379
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000108908	protein_coding	alternative1	15	1	100870952	7030
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000133874	protein_coding		4	-1	141606027	414
ENSMUSG00000052760	protein_coding	A630001G21Rik	ENSMUST00000159122	protein_coding	principal1	1	-1	85778643	2053
ENSMUSG00000051705	protein_coding	Senp8	ENSMUST00000216045	processed_transcript		9	-1	59750710	392
ENSMUSG00000084795	processed_transcript	Gm14617	ENSMUST00000156804	retained_intron		2	-1	174838634	718
ENSMUSG00000006219	protein_coding	Fblim1	ENSMUST00000105785	protein_coding	principal1	4	-1	141606052	3091
ENSMUSG00000051705	protein_coding	Senp8	ENSMUST00000177963	protein_coding	principal3	9	-1	59750649	3792
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000202071	protein_coding		15	1	100871420	322
ENSMUSG00000084795	processed_transcript	Gm14617	ENSMUST00000144208	lincRNA		2	-1	174841051	607
ENSMUSG00000029184	protein_coding	Olfr109	ENSMUST00000217602	protein_coding	principal1	17	1	37458973	5437
ENSMUSG00000102777	lincRNA	Gm38161	ENSMUST00000195344	lincRNA		1	1	191132657	576
ENSMUSG00000029184	protein_coding	Olfr109	ENSMUST00000214938	protein_coding	principal1	17	1	37458973	5550
ENSMUSG00000084795	processed_transcript	Gm14617	ENSMUST00000128053	lincRNA		2	-1	174841174	798
ENSMUSG00000032745	protein_coding	Gpbp1	ENSMUST00000047627	protein_coding	principal3	13	-1	111490111	3694
ENSMUSG00000029184	protein_coding	Olfr109	ENSMUST00000214668	protein_coding	principal1	17	1	37458916	5861
ENSMUSG00000081135	processed_pseudogene	Gm14800	ENSMUST00000122084	processed_pseudogene		X	-1	97162926	1272
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000096198	protein_coding		15	1	100933429	1072
ENSMUSG00000052760	protein_coding	A630001G21Rik	ENSMUST00000064788	protein_coding	principal1	1	-1	85736629	1353
ENSMUSG00000029184	protein_coding	Olfr109	ENSMUST00000031086	protein_coding	principal1	17	1	37466208	945
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000200959	protein_coding		15	1	100936306	587
ENSMUSG00000025945	protein_coding	Crygf	ENSMUST00000027082	protein_coding	principal1	1	1	65926520	627
ENSMUSG00000087215	lincRNA	Gm14618	ENSMUST00000149377	lincRNA		2	-1	174853357	740
ENSMUSG00000052760	protein_coding	A630001G21Rik	ENSMUST00000162038	nonsense_mediated_decay		1	-1	85736581	1508
ENSMUSG00000082158	processed_pseudogene	Gm14116	ENSMUST00000117733	processed_pseudogene		2	-1	147147212	805
ENSMUSG00000111188	processed_pseudogene	Gm19709	ENSMUST00000215403	processed_pseudogene		9	-1	38786771	482
ENSMUSG00000086177	lincRNA	Gm14616	ENSMUST00000131690	lincRNA		2	1	174856289	314
ENSMUSG00000091017	protein_coding	Fam71a	ENSMUST00000171798	protein_coding	principal1	1	-1	191164817	2234
ENSMUSG00000052760	protein_coding	A630001G21Rik	ENSMUST00000161453	processed_transcript		1	-1	85736554	551
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000130087	processed_transcript		5	1	73484444	945
ENSMUSG00000025945	protein_coding	Crygf	ENSMUST00000114027	protein_coding		1	1	65926538	594
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000182450	nonsense_mediated_decay		12	1	83642639	2994
ENSMUSG00000052760	protein_coding	A630001G21Rik	ENSMUST00000159325	processed_transcript		1	-1	85736561	382
ENSMUSG00000107581	processed_pseudogene	Gm44828	ENSMUST00000203745	processed_pseudogene		6	-1	130953462	106
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000113558	protein_coding		5	1	73491025	4023
ENSMUSG00000032745	protein_coding	Gpbp1	ENSMUST00000091236	protein_coding	alternative2	13	-1	111490028	3299
ENSMUSG00000043911	protein_coding	Olfr922	ENSMUST00000213164	protein_coding	principal1	9	1	38814614	4028
ENSMUSG00000078906	protein_coding	Gm14444	ENSMUST00000109069	protein_coding		2	1	175010241	919
ENSMUSG00000107587	processed_pseudogene	Gm44989	ENSMUST00000204749	processed_pseudogene		6	-1	130980506	217
ENSMUSG00000100217	lincRNA	9930111H07Rik	ENSMUST00000187270	lincRNA		1	1	85775271	821
ENSMUSG00000078906	protein_coding	Gm14444	ENSMUST00000109070	protein_coding	principal1	2	1	175010319	1281
ENSMUSG00000026824	protein_coding	Kcnj3	ENSMUST00000067101	protein_coding	principal1	2	1	55435970	5215
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000182255	retained_intron		12	1	83642699	4672
ENSMUSG00000112488	lincRNA	Gm33981	ENSMUST00000219918	lincRNA		10	-1	96958871	660
ENSMUSG00000081736	processed_pseudogene	Gm14971	ENSMUST00000117980	processed_pseudogene		X	1	126299995	663
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000183039	processed_transcript		12	1	83646182	444
ENSMUSG00000026824	protein_coding	Kcnj3	ENSMUST00000112632	protein_coding		2	1	55437165	4068
ENSMUSG00000043911	protein_coding	Olfr922	ENSMUST00000051004	protein_coding	principal1	9	1	38815408	1132
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000182032	retained_intron		12	1	83648302	3806
ENSMUSG00000082611	processed_pseudogene	Gm7746	ENSMUST00000120966	processed_pseudogene		X	-1	126612516	503
ENSMUSG00000032745	protein_coding	Gpbp1	ENSMUST00000136471	nonsense_mediated_decay		13	-1	111487712	1940
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000183242	retained_intron		12	1	83658525	1060
ENSMUSG00000085608	unprocessed_pseudogene	Gm16354	ENSMUST00000155376	unprocessed_pseudogene		2	-1	175023503	150
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000183282	processed_transcript		12	1	83662976	278
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000063882	protein_coding	principal1	5	1	73491033	4116
ENSMUSG00000022510	protein_coding	Trp63	ENSMUST00000115304	protein_coding		16	1	25801916	2634
ENSMUSG00000082112	unprocessed_pseudogene	Gm14445	ENSMUST00000117051	unprocessed_pseudogene		2	1	175038121	1484
ENSMUSG00000026824	protein_coding	Kcnj3	ENSMUST00000112633	protein_coding	principal1	2	1	55437156	1679
ENSMUSG00000044798	protein_coding	Olfr923	ENSMUST00000213550	processed_transcript		9	1	38826545	2497
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000182840	processed_transcript		12	1	83674525	518
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000027287	protein_coding	principal3	1	1	37299891	5691
ENSMUSG00000058670	protein_coding	4932411N23Rik	ENSMUST00000081074	protein_coding	principal1	X	-1	126815868	3407
ENSMUSG00000044798	protein_coding	Olfr923	ENSMUST00000213619	protein_coding	alternative2	9	1	38826545	2846
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000134092	nonsense_mediated_decay		5	1	73491067	514
ENSMUSG00000010608	protein_coding	Rbm25	ENSMUST00000183181	retained_intron		12	1	83674853	609
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000133137	nonsense_mediated_decay		5	1	73491123	521
ENSMUSG00000032745	protein_coding	Gpbp1	ENSMUST00000156221	processed_transcript		13	-1	111453423	584
ENSMUSG00000044798	protein_coding	Olfr923	ENSMUST00000051238	protein_coding	alternative2	9	1	38827615	1068
ENSMUSG00000044798	protein_coding	Olfr923	ENSMUST00000219798	protein_coding	principal2	9	1	38827615	1068
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000112983	protein_coding	alternative2	2	1	35696732	6051
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000193024	retained_intron		1	1	37299893	2874
ENSMUSG00000032745	protein_coding	Gpbp1	ENSMUST00000143331	processed_transcript		13	-1	111453382	532
ENSMUSG00000022510	protein_coding	Trp63	ENSMUST00000115305	protein_coding		16	1	25801916	1729
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000140264	protein_coding		1	1	37299915	3676
ENSMUSG00000032745	protein_coding	Gpbp1	ENSMUST00000129638	retained_intron		13	-1	111453423	542
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000200963	protein_coding		15	1	100936325	5814
ENSMUSG00000022510	protein_coding	Trp63	ENSMUST00000040231	protein_coding	principal3	16	1	25801916	4703
ENSMUSG00000033114	protein_coding	Slc35d2	ENSMUST00000099441	protein_coding	principal2	13	-1	64129355	2303
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000112987	protein_coding	alternative2	2	1	35581060	6287
ENSMUSG00000084050	processed_pseudogene	Gm14439	ENSMUST00000122320	processed_pseudogene		2	1	175062436	441
ENSMUSG00000085634	lincRNA	Gm15290	ENSMUST00000132880	lincRNA		13	-1	111549911	663
ENSMUSG00000106596	TEC	Gm42822	ENSMUST00000200507	TEC		3	1	136701211	1529
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000132401	protein_coding	alternative2	1	1	37300308	3234
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000201438	protein_coding		15	1	100955501	2110
ENSMUSG00000078905	protein_coding	Gm14393	ENSMUST00000072895	protein_coding	principal1	2	-1	175067763	625
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000112986	protein_coding	alternative2	2	1	35558266	5580
ENSMUSG00000028161	protein_coding	Ppp3ca	ENSMUST00000124206	processed_transcript		3	1	136670124	990
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000141553	protein_coding		5	1	73491438	347
ENSMUSG00000035946	protein_coding	Gsx2	ENSMUST00000040477	protein_coding	principal1	5	1	75075601	1665
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000136846	protein_coding	alternative1	1	1	37300308	3576
ENSMUSG00000046836	protein_coding	Brox	ENSMUST00000057062	protein_coding	principal1	1	-1	183296992	3430
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000202349	retained_intron		15	1	100956920	514
ENSMUSG00000078905	protein_coding	Gm14393	ENSMUST00000109066	protein_coding		2	-1	175067781	564
ENSMUSG00000039096	protein_coding	Rsad1	ENSMUST00000040487	protein_coding	principal1	11	-1	94549199	4143
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000202347	retained_intron		15	1	100956955	326
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000202702	protein_coding		15	1	100957084	1618
ENSMUSG00000033114	protein_coding	Slc35d2	ENSMUST00000221572	retained_intron		13	-1	64107163	923
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000132615	protein_coding	alternative1	1	1	37357397	3038
ENSMUSG00000082772	processed_pseudogene	Gm381	ENSMUST00000117443	processed_pseudogene		X	-1	126907617	2037
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000065001	protein_coding	principal3	2	1	35691994	6392
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000202452	retained_intron		15	1	100968596	681
ENSMUSG00000035946	protein_coding	Gsx2	ENSMUST00000160104	protein_coding		5	1	75075602	1182
ENSMUSG00000020246	protein_coding	Hcfc2	ENSMUST00000160845	processed_transcript		10	1	82696160	407
ENSMUSG00000053545	antisense	6430503K07Rik	ENSMUST00000144411	antisense		2	1	147187424	476
ENSMUSG00000108379	lincRNA	A730082K24Rik	ENSMUST00000205913	lincRNA		7	1	114948650	1808
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000145645	protein_coding		5	1	73492430	1243
ENSMUSG00000033191	protein_coding	Tie1	ENSMUST00000184261	protein_coding		4	-1	118489755	4234
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000193774	protein_coding		1	1	37357397	1243
ENSMUSG00000081244	processed_pseudogene	Gm13529	ENSMUST00000121118	processed_pseudogene		2	-1	33652798	410
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000156806	protein_coding		5	1	73492656	714
ENSMUSG00000108379	lincRNA	A730082K24Rik	ENSMUST00000205365	lincRNA		7	1	114948688	465
ENSMUSG00000031948	protein_coding	Kars	ENSMUST00000093120	protein_coding	alternative2	8	-1	112011266	2131
ENSMUSG00000084774	lincRNA	Gm14110	ENSMUST00000127688	lincRNA		2	-1	147325087	758
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000137266	protein_coding	alternative2	1	1	37357919	2934
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000149970	processed_transcript		5	1	73492847	663
ENSMUSG00000108379	lincRNA	A730082K24Rik	ENSMUST00000206806	lincRNA		7	1	114951274	688
ENSMUSG00000108379	lincRNA	A730082K24Rik	ENSMUST00000206008	lincRNA		7	1	114951289	636
ENSMUSG00000046836	protein_coding	Brox	ENSMUST00000163528	protein_coding	principal1	1	-1	183297256	3413
ENSMUSG00000051674	protein_coding	Dcun1d4	ENSMUST00000136268	protein_coding		5	1	73510868	493
ENSMUSG00000039774	protein_coding	Galnt12	ENSMUST00000045041	protein_coding	principal1	4	1	47091909	2288
ENSMUSG00000108379	lincRNA	A730082K24Rik	ENSMUST00000205795	lincRNA		7	1	114951307	658
ENSMUSG00000086509	antisense	Nkx2-2os	ENSMUST00000136998	antisense		2	1	147184083	4345
ENSMUSG00000031948	protein_coding	Kars	ENSMUST00000164470	protein_coding	alternative2	8	-1	112011266	2189
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000202971	retained_intron		15	1	100970122	840
ENSMUSG00000062372	protein_coding	Otof	ENSMUST00000114747	protein_coding		5	-1	30461902	6881
ENSMUSG00000033114	protein_coding	Slc35d2	ENSMUST00000223461	nonsense_mediated_decay		13	-1	64129336	1542
ENSMUSG00000039774	protein_coding	Galnt12	ENSMUST00000107744	protein_coding		4	1	47091923	2077
ENSMUSG00000022510	protein_coding	Trp63	ENSMUST00000115306	protein_coding		16	1	25801916	4691
ENSMUSG00000039096	protein_coding	Rsad1	ENSMUST00000132274	processed_transcript		11	-1	94549255	4203
ENSMUSG00000031948	protein_coding	Kars	ENSMUST00000034426	protein_coding	principal3	8	-1	112011323	2008
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000201246	processed_transcript		15	1	101015937	903
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000058307	protein_coding		1	1	37369217	2963
ENSMUSG00000002010	protein_coding	Idh3g	ENSMUST00000052761	protein_coding	principal1	X	-1	73786897	1331
ENSMUSG00000039096	protein_coding	Rsad1	ENSMUST00000143299	processed_transcript		11	-1	94548792	743
ENSMUSG00000033114	protein_coding	Slc35d2	ENSMUST00000222794	nonsense_mediated_decay		13	-1	64129325	983
ENSMUSG00000022510	protein_coding	Trp63	ENSMUST00000115308	protein_coding		16	1	25683765	2380
ENSMUSG00000027434	protein_coding	Nkx2-2	ENSMUST00000109970	protein_coding		2	-1	147186101	1053
ENSMUSG00000031948	protein_coding	Kars	ENSMUST00000212693	retained_intron		8	-1	112004767	2419
ENSMUSG00000033105	protein_coding	Lss	ENSMUST00000159013	processed_transcript		10	1	76531588	352
ENSMUSG00000033114	protein_coding	Slc35d2	ENSMUST00000220792	protein_coding	alternative2	13	-1	64129311	917
ENSMUSG00000039096	protein_coding	Rsad1	ENSMUST00000148888	processed_transcript		11	-1	94548602	469
ENSMUSG00000033114	protein_coding	Slc35d2	ENSMUST00000222692	processed_transcript		13	-1	64129305	1474
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000108910	protein_coding	alternative1	15	1	100936271	11232
ENSMUSG00000031948	protein_coding	Kars	ENSMUST00000211978	processed_transcript		8	-1	112011297	349
ENSMUSG00000031928	protein_coding	Mre11a	ENSMUST00000034405	protein_coding	principal1	9	1	14784654	3286
ENSMUSG00000022510	protein_coding	Trp63	ENSMUST00000065523	protein_coding		16	1	25683765	5257
ENSMUSG00000033114	protein_coding	Slc35d2	ENSMUST00000222866	protein_coding		13	-1	64129330	396
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000114933	protein_coding		1	1	37369217	3004
ENSMUSG00000023033	protein_coding	Scn8a	ENSMUST00000082209	protein_coding	alternative1	15	1	100870683	11293
ENSMUSG00000100550	lincRNA	2310039L15Rik	ENSMUST00000185313	lincRNA		10	1	95336276	642
ENSMUSG00000031948	protein_coding	Kars	ENSMUST00000211990	protein_coding		8	-1	112011275	407
ENSMUSG00000046836	protein_coding	Brox	ENSMUST00000194327	nonsense_mediated_decay		1	-1	183297269	2868
ENSMUSG00000100550	lincRNA	2310039L15Rik	ENSMUST00000220058	lincRNA		10	1	95354888	727
ENSMUSG00000100550	lincRNA	2310039L15Rik	ENSMUST00000219492	lincRNA		10	1	95361598	3743
ENSMUSG00000046836	protein_coding	Brox	ENSMUST00000194695	retained_intron		1	-1	183286182	617
ENSMUSG00000033114	protein_coding	Slc35d2	ENSMUST00000222168	protein_coding		13	-1	64129368	472
ENSMUSG00000031928	protein_coding	Mre11a	ENSMUST00000115632	protein_coding		9	1	14784676	5660
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000112981	nonsense_mediated_decay		2	1	35661541	6219
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000123124	retained_intron		1	1	37377672	463
ENSMUSG00000081719	processed_pseudogene	Gm13726	ENSMUST00000121278	processed_pseudogene		2	-1	77963062	794
ENSMUSG00000113558	protein_coding	Tmdd1	ENSMUST00000222611	protein_coding	principal1	15	-1	101047397	1056
ENSMUSG00000095440	protein_coding	Fignl2	ENSMUST00000213610	protein_coding	principal1	15	-1	101078567	4462
ENSMUSG00000031928	protein_coding	Mre11a	ENSMUST00000147305	protein_coding		9	1	14784702	793
ENSMUSG00000026113	protein_coding	Inpp4a	ENSMUST00000168546	protein_coding		1	1	37369221	2964
ENSMUSG00000031928	protein_coding	Mre11a	ENSMUST00000215820	protein_coding		9	1	14785008	274
ENSMUSG00000046836	protein_coding	Brox	ENSMUST00000194089	retained_intron		1	-1	183292705	497
ENSMUSG00000095440	protein_coding	Fignl2	ENSMUST00000178140	protein_coding	principal1	15	-1	101054399	4206
ENSMUSG00000027434	protein_coding	Nkx2-2	ENSMUST00000067075	protein_coding	principal1	2	-1	147186404	2120
ENSMUSG00000046836	protein_coding	Brox	ENSMUST00000195054	nonsense_mediated_decay		1	-1	183297228	614
ENSMUSG00000025432	protein_coding	Avil	ENSMUST00000026500	protein_coding	principal1	10	1	127000709	3033
ENSMUSG00000100010	lincRNA	1700010I02Rik	ENSMUST00000188525	lincRNA		3	-1	7954882	430
ENSMUSG00000046836	protein_coding	Brox	ENSMUST00000194438	retained_intron		1	-1	183292272	462
ENSMUSG00000031928	protein_coding	Mre11a	ENSMUST00000147676	protein_coding		9	1	14797153	510
ENSMUSG00000086064	antisense	4930439A04Rik	ENSMUST00000137241	antisense		1	-1	37334156	739
ENSMUSG00000062372	protein_coding	Otof	ENSMUST00000074171	protein_coding	principal1	5	-1	30461932	7129
ENSMUSG00000046836	protein_coding	Brox	ENSMUST00000193326	processed_transcript		1	-1	183297256	816
ENSMUSG00000100010	lincRNA	1700010I02Rik	ENSMUST00000187729	lincRNA		3	-1	7954889	438
ENSMUSG00000027434	protein_coding	Nkx2-2	ENSMUST00000109969	processed_transcript		2	-1	147194243	340
ENSMUSG00000086064	antisense	4930439A04Rik	ENSMUST00000141402	antisense		1	-1	37334172	405
ENSMUSG00000031928	protein_coding	Mre11a	ENSMUST00000136568	processed_transcript		9	1	14797166	409
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000091010	protein_coding	alternative2	2	1	35622037	6455
ENSMUSG00000046836	protein_coding	Brox	ENSMUST00000192829	protein_coding		1	-1	183295852	593
ENSMUSG00000027434	protein_coding	Nkx2-2	ENSMUST00000172627	processed_transcript		2	-1	147194242	378
ENSMUSG00000110366	bidirectional_promoter_lncRNA	Gm45885	ENSMUST00000211131	bidirectional_promoter_lncRNA		7	1	105400314	370
ENSMUSG00000081971	processed_pseudogene	Gm14115	ENSMUST00000119242	processed_pseudogene		2	-1	147281084	482
ENSMUSG00000085431	lincRNA	4930440I19Rik	ENSMUST00000144728	lincRNA		2	1	78051223	992
ENSMUSG00000110366	bidirectional_promoter_lncRNA	Gm45885	ENSMUST00000211520	bidirectional_promoter_lncRNA		7	1	105400510	1383
ENSMUSG00000025432	protein_coding	Avil	ENSMUST00000142698	protein_coding		10	1	127000739	419
ENSMUSG00000042901	protein_coding	Aida	ENSMUST00000192252	retained_intron		1	1	183296590	1932
ENSMUSG00000084371	processed_pseudogene	Gm14113	ENSMUST00000121399	processed_pseudogene		2	1	147289755	976
ENSMUSG00000033105	protein_coding	Lss	ENSMUST00000162475	retained_intron		10	1	76531607	3969
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000138957	processed_transcript		2	1	35661619	668
ENSMUSG00000024078	protein_coding	Ttc27	ENSMUST00000024882	protein_coding	principal2	17	1	74717732	2838
ENSMUSG00000025432	protein_coding	Avil	ENSMUST00000126816	protein_coding		10	1	127003001	350
ENSMUSG00000107964	TEC	4930447C11Rik	ENSMUST00000204503	TEC		6	-1	146847203	928
ENSMUSG00000068180	lincRNA	AY512915	ENSMUST00000162315	lincRNA		6	-1	95333991	676
ENSMUSG00000085431	lincRNA	4930440I19Rik	ENSMUST00000145972	lincRNA		2	1	78051177	676
ENSMUSG00000024078	protein_coding	Ttc27	ENSMUST00000234751	protein_coding		17	1	74717762	644
ENSMUSG00000025432	protein_coding	Avil	ENSMUST00000129173	protein_coding	principal1	10	1	127003135	2925
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000145698	nonsense_mediated_decay		2	1	35621981	6649
ENSMUSG00000022682	protein_coding	Rrn3	ENSMUST00000230102	retained_intron		16	1	13780708	969
ENSMUSG00000031885	protein_coding	Cbfb	ENSMUST00000052209	protein_coding	principal3	8	1	105170674	2883
ENSMUSG00000068180	lincRNA	AY512915	ENSMUST00000089303	lincRNA		6	-1	95333978	1821
ENSMUSG00000025477	protein_coding	Inpp5a	ENSMUST00000106098	protein_coding	principal1	7	1	139389109	2826
ENSMUSG00000024078	protein_coding	Ttc27	ENSMUST00000234568	protein_coding	alternative2	17	1	74717912	2651
ENSMUSG00000020246	protein_coding	Hcfc2	ENSMUST00000020478	protein_coding	principal1	10	1	82699007	3422
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000135741	protein_coding	alternative2	2	1	35582840	4128
ENSMUSG00000068180	lincRNA	AY512915	ENSMUST00000159937	lincRNA		6	-1	95333993	3650
ENSMUSG00000024078	protein_coding	Ttc27	ENSMUST00000234558	protein_coding		17	1	74739640	585
ENSMUSG00000031931	protein_coding	Ankrd49	ENSMUST00000216372	protein_coding	principal1	9	-1	14784856	2679
ENSMUSG00000024078	protein_coding	Ttc27	ENSMUST00000234705	nonsense_mediated_decay		17	1	74747665	1767
ENSMUSG00000068180	lincRNA	AY512915	ENSMUST00000159751	lincRNA		6	-1	95333971	678
ENSMUSG00000022858	protein_coding	Tra2b	ENSMUST00000161286	protein_coding	principal3	16	-1	22266005	3403
ENSMUSG00000068180	lincRNA	AY512915	ENSMUST00000171594	lincRNA		6	-1	95333977	213
ENSMUSG00000026883	protein_coding	Dab2ip	ENSMUST00000124098	protein_coding		2	1	35692333	3972
ENSMUSG00000024078	protein_coding	Ttc27	ENSMUST00000234628	protein_coding		17	1	74751074	933
ENSMUSG00000020246	protein_coding	Hcfc2	ENSMUST00000162422	nonsense_mediated_decay		10	1	82699211	779
ENSMUSG00000031931	protein_coding	Ankrd49	ENSMUST00000214456	protein_coding		9	-1	14784550	3207
ENSMUSG00000024078	protein_coding	Ttc27	ENSMUST00000235123	processed_transcript		17	1	74770066	350
ENSMUSG00000086555	processed_transcript	Gm13446	ENSMUST00000124555	processed_transcript		2	-1	35558702	2033
ENSMUSG00000113292	processed_pseudogene	Gm18413	ENSMUST00000221573	processed_pseudogene		13	-1	100154505	655
ENSMUSG00000031931	protein_coding	Ankrd49	ENSMUST00000216037	protein_coding	principal1	9	-1	14784526	1037
ENSMUSG00000020246	protein_coding	Hcfc2	ENSMUST00000160681	protein_coding		10	1	82728349	2887
ENSMUSG00000022858	protein_coding	Tra2b	ENSMUST00000023564	protein_coding	alternative1	16	-1	22255247	1369
ENSMUSG00000024078	protein_coding	Ttc27	ENSMUST00000234264	retained_intron		17	1	74861921	463
ENSMUSG00000047034	protein_coding	Ankrd33	ENSMUST00000070875	protein_coding		15	1	101115755	1460
ENSMUSG00000025477	protein_coding	Inpp5a	ENSMUST00000026550	protein_coding		7	1	139389110	2774
ENSMUSG00000086555	processed_transcript	Gm13446	ENSMUST00000134679	processed_transcript		2	-1	35558485	596
ENSMUSG00000031931	protein_coding	Ankrd49	ENSMUST00000214979	protein_coding		9	-1	14784522	416
ENSMUSG00000117441	antisense	Gm50021	ENSMUST00000234097	antisense		17	-1	74860934	1734
ENSMUSG00000086870	antisense	Gm15288	ENSMUST00000126640	antisense		13	-1	111568553	653
ENSMUSG00000031931	protein_coding	Ankrd49	ENSMUST00000214882	retained_intron		9	-1	14784498	1633
ENSMUSG00000025477	protein_coding	Inpp5a	ENSMUST00000097975	protein_coding		7	1	139400489	2301
ENSMUSG00000031931	protein_coding	Ankrd49	ENSMUST00000034406	protein_coding	principal1	9	-1	14782964	1753
ENSMUSG00000086649	processed_transcript	Gm15286	ENSMUST00000156236	processed_transcript		13	1	111580261	621
ENSMUSG00000025477	protein_coding	Inpp5a	ENSMUST00000138183	processed_transcript		7	1	139454054	332
ENSMUSG00000002010	protein_coding	Idh3g	ENSMUST00000156299	retained_intron		X	-1	73786897	2080
ENSMUSG00000111817	processed_pseudogene	Gm47154	ENSMUST00000216810	processed_pseudogene		9	-1	14808040	267
ENSMUSG00000086649	processed_transcript	Gm15286	ENSMUST00000150623	processed_transcript		13	1	111616541	743
ENSMUSG00000025477	protein_coding	Inpp5a	ENSMUST00000131781	processed_transcript		7	1	139481633	341
ENSMUSG00000002010	protein_coding	Idh3g	ENSMUST00000129070	retained_intron		X	-1	73780897	859
ENSMUSG00000106845	lincRNA	Gm43156	ENSMUST00000202338	lincRNA		5	1	147745516	2127
ENSMUSG00000025477	protein_coding	Inpp5a	ENSMUST00000210320	retained_intron		7	1	139516659	2196
ENSMUSG00000002010	protein_coding	Idh3g	ENSMUST00000148419	retained_intron		X	-1	73780696	680
ENSMUSG00000107065	processed_pseudogene	Gm43155	ENSMUST00000202661	processed_pseudogene		5	1	147822245	494
ENSMUSG00000031885	protein_coding	Cbfb	ENSMUST00000109392	protein_coding	alternative1	8	1	105170689	2891
ENSMUSG00000033191	protein_coding	Tie1	ENSMUST00000047421	protein_coding	principal1	4	-1	118490061	4091
ENSMUSG00000002010	protein_coding	Idh3g	ENSMUST00000130119	retained_intron		X	-1	73780812	688
ENSMUSG00000078247	antisense	Airn	ENSMUST00000160932	antisense		17	1	12741311	856
ENSMUSG00000022858	protein_coding	Tra2b	ENSMUST00000162413	nonsense_mediated_decay		16	-1	22265926	1687
ENSMUSG00000020770	protein_coding	Unk	ENSMUST00000021116	protein_coding	principal3	11	1	116030322	3735
ENSMUSG00000040521	protein_coding	Tsfm	ENSMUST00000152054	protein_coding		10	-1	127030803	655
ENSMUSG00000025477	protein_coding	Inpp5a	ENSMUST00000152475	retained_intron		7	1	139523858	748
ENSMUSG00000022858	protein_coding	Tra2b	ENSMUST00000161774	retained_intron		16	-1	22252649	668
ENSMUSG00000047034	protein_coding	Ankrd33	ENSMUST00000229263	nonsense_mediated_decay		15	1	101115756	902
ENSMUSG00000078247	antisense	Airn	ENSMUST00000162826	antisense		17	1	12741330	607
ENSMUSG00000022858	protein_coding	Tra2b	ENSMUST00000232411	retained_intron		16	-1	22251853	4112
ENSMUSG00000078247	antisense	Airn	ENSMUST00000079529	antisense		17	1	12741340	1147
ENSMUSG00000078247	antisense	Airn	ENSMUST00000239232	antisense		17	1	12741364	1022
ENSMUSG00000020770	protein_coding	Unk	ENSMUST00000106452	protein_coding	alternative2	11	1	116030322	3696
ENSMUSG00000022858	protein_coding	Tra2b	ENSMUST00000159946	processed_transcript		16	-1	22259622	946
ENSMUSG00000003882	protein_coding	Il7r	ENSMUST00000228782	protein_coding	alternative2	15	-1	9529828	3516
ENSMUSG00000078247	antisense	Airn	ENSMUST00000159791	antisense		17	1	12741385	485
ENSMUSG00000047034	protein_coding	Ankrd33	ENSMUST00000231158	protein_coding		15	1	101115757	555
ENSMUSG00000016283	protein_coding	H2-M2	ENSMUST00000016427	protein_coding	alternative2	17	-1	37483551	1550
ENSMUSG00000022858	protein_coding	Tra2b	ENSMUST00000232471	nonsense_mediated_decay		16	-1	22265909	632
ENSMUSG00000078247	antisense	Airn	ENSMUST00000159731	antisense		17	1	12741398	435
ENSMUSG00000078247	antisense	Airn	ENSMUST00000239276	antisense		17	1	12813652	1145
ENSMUSG00000033191	protein_coding	Tie1	ENSMUST00000153286	processed_transcript		4	-1	118489793	2851
ENSMUSG00000020770	protein_coding	Unk	ENSMUST00000176788	processed_transcript		11	1	116030323	471
ENSMUSG00000022858	protein_coding	Tra2b	ENSMUST00000160579	retained_intron		16	-1	22265918	1376
ENSMUSG00000022401	protein_coding	Xpnpep3	ENSMUST00000163754	protein_coding	principal1	15	1	81400138	6058
ENSMUSG00000022858	protein_coding	Tra2b	ENSMUST00000231312	nonsense_mediated_decay		16	-1	22265900	550
ENSMUSG00000002010	protein_coding	Idh3g	ENSMUST00000140944	processed_transcript		X	-1	73786622	829
ENSMUSG00000078247	antisense	Airn	ENSMUST00000161890	antisense		17	1	12815931	1375
ENSMUSG00000041309	protein_coding	Nkx6-2	ENSMUST00000097974	nonsense_mediated_decay		7	-1	139582797	1907
ENSMUSG00000039621	protein_coding	Prex1	ENSMUST00000036719	protein_coding	principal1	2	-1	166713832	6533
ENSMUSG00000002010	protein_coding	Idh3g	ENSMUST00000142707	retained_intron		X	-1	73781707	702
ENSMUSG00000031885	protein_coding	Cbfb	ENSMUST00000109395	protein_coding		8	1	105170744	2709
ENSMUSG00000089817	processed_pseudogene	Gm7162	ENSMUST00000161205	processed_pseudogene		17	-1	12820842	1024
ENSMUSG00000002010	protein_coding	Idh3g	ENSMUST00000129367	retained_intron		X	-1	73782219	641
ENSMUSG00000061798	protein_coding	Olfr1204	ENSMUST00000213283	protein_coding	principal1	2	1	88849292	6935
ENSMUSG00000066842	protein_coding	Hmcn1	ENSMUST00000074783	protein_coding	principal2	1	-1	150993051	17908
ENSMUSG00000108181	TEC	C030015A19Rik	ENSMUST00000203368	TEC		6	1	90386807	2551
ENSMUSG00000002010	protein_coding	Idh3g	ENSMUST00000145341	processed_transcript		X	-1	73782368	395
ENSMUSG00000016283	protein_coding	H2-M2	ENSMUST00000171139	protein_coding	principal2	17	-1	37483552	1298
ENSMUSG00000117061	lincRNA	Gm49958	ENSMUST00000233721	lincRNA		17	-1	12800795	353
ENSMUSG00000003882	protein_coding	Il7r	ENSMUST00000003981	protein_coding	principal2	15	-1	9529835	3540
ENSMUSG00000022682	protein_coding	Rrn3	ENSMUST00000023363	protein_coding	principal1	16	1	13780713	3582
ENSMUSG00000041309	protein_coding	Nkx6-2	ENSMUST00000106095	protein_coding	principal1	7	-1	139582790	1299
ENSMUSG00000021978	protein_coding	Extl3	ENSMUST00000225633	protein_coding	principal1	14	-1	65098105	6013
ENSMUSG00000047034	protein_coding	Ankrd33	ENSMUST00000229930	nonsense_mediated_decay		15	1	101115801	1093
ENSMUSG00000089769	processed_pseudogene	Gm16574	ENSMUST00000159301	processed_pseudogene		17	1	12818793	745
ENSMUSG00000061798	protein_coding	Olfr1204	ENSMUST00000078631	protein_coding	principal1	2	1	88851952	930
ENSMUSG00000039621	protein_coding	Prex1	ENSMUST00000127553	retained_intron		2	-1	166713791	2941
ENSMUSG00000028862	protein_coding	Map3k6	ENSMUST00000030677	protein_coding	principal1	4	1	133240818	4334
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000084512	protein_coding	alternative2	8	-1	25201449	6471
ENSMUSG00000031885	protein_coding	Cbfb	ENSMUST00000109394	protein_coding		8	1	105170945	2487
ENSMUSG00000062103	protein_coding	Olfr924	ENSMUST00000217350	protein_coding	principal1	9	1	38844449	3431
ENSMUSG00000040521	protein_coding	Tsfm	ENSMUST00000040560	protein_coding	principal1	10	-1	127030840	1206
ENSMUSG00000021978	protein_coding	Extl3	ENSMUST00000223989	processed_transcript		14	-1	65149855	582
ENSMUSG00000066842	protein_coding	Hmcn1	ENSMUST00000137197	protein_coding	alternative1	1	-1	150993051	16554
ENSMUSG00000028862	protein_coding	Map3k6	ENSMUST00000123612	processed_transcript		4	1	133247202	570
ENSMUSG00000062103	protein_coding	Olfr924	ENSMUST00000072977	protein_coding	principal1	9	1	38848116	927
ENSMUSG00000003882	protein_coding	Il7r	ENSMUST00000227234	processed_transcript		15	-1	9529766	1548
ENSMUSG00000047034	protein_coding	Ankrd33	ENSMUST00000229842	protein_coding		15	1	101115806	567
ENSMUSG00000021978	protein_coding	Extl3	ENSMUST00000022550	protein_coding	principal1	14	-1	65098106	5977
ENSMUSG00000031885	protein_coding	Cbfb	ENSMUST00000186070	retained_intron		8	1	105171109	395
ENSMUSG00000039621	protein_coding	Prex1	ENSMUST00000099080	protein_coding		2	-1	166638968	5818
ENSMUSG00000040521	protein_coding	Tsfm	ENSMUST00000138556	retained_intron		10	-1	127025097	641
ENSMUSG00000047034	protein_coding	Ankrd33	ENSMUST00000229954	protein_coding	principal1	15	1	101115828	1499
ENSMUSG00000003882	protein_coding	Il7r	ENSMUST00000228673	processed_transcript		15	-1	9530176	359
ENSMUSG00000066842	protein_coding	Hmcn1	ENSMUST00000177036	protein_coding		1	-1	150583212	631
ENSMUSG00000020770	protein_coding	Unk	ENSMUST00000150759	processed_transcript		11	1	116038657	3692
ENSMUSG00000031885	protein_coding	Cbfb	ENSMUST00000190915	processed_transcript		8	1	105171492	371
ENSMUSG00000028862	protein_coding	Map3k6	ENSMUST00000127681	processed_transcript		4	1	133247278	443
ENSMUSG00000047034	protein_coding	Ankrd33	ENSMUST00000231208	retained_intron		15	1	101116449	731
ENSMUSG00000039621	protein_coding	Prex1	ENSMUST00000109246	protein_coding		2	-1	166582071	2386
ENSMUSG00000022401	protein_coding	Xpnpep3	ENSMUST00000164144	processed_transcript		15	1	81400150	666
ENSMUSG00000031885	protein_coding	Cbfb	ENSMUST00000187323	processed_transcript		8	1	105171564	475
ENSMUSG00000020770	protein_coding	Unk	ENSMUST00000176212	retained_intron		11	1	116049299	817
ENSMUSG00000048794	protein_coding	Cfap100	ENSMUST00000153843	nonsense_mediated_decay		6	-1	90428787	2992
ENSMUSG00000022401	protein_coding	Xpnpep3	ENSMUST00000163296	retained_intron		15	1	81400150	1082
ENSMUSG00000066842	protein_coding	Hmcn1	ENSMUST00000151899	retained_intron		1	-1	150565604	471
ENSMUSG00000020770	protein_coding	Unk	ENSMUST00000175702	retained_intron		11	1	116053295	724
ENSMUSG00000040521	protein_coding	Tsfm	ENSMUST00000140564	processed_transcript		10	-1	127030391	833
ENSMUSG00000040521	protein_coding	Tsfm	ENSMUST00000145476	retained_intron		10	-1	127030759	656
ENSMUSG00000022401	protein_coding	Xpnpep3	ENSMUST00000166831	retained_intron		15	1	81400170	1501
ENSMUSG00000020770	protein_coding	Unk	ENSMUST00000140683	retained_intron		11	1	116055898	600
ENSMUSG00000066842	protein_coding	Hmcn1	ENSMUST00000137909	processed_transcript		1	-1	150580615	378
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000084030	protein_coding	principal4	8	-1	25201542	7788
ENSMUSG00000054203	protein_coding	Ifi205	ENSMUST00000059226	protein_coding	principal1	1	-1	174031755	1613
ENSMUSG00000039621	protein_coding	Prex1	ENSMUST00000140624	retained_intron		2	-1	166713602	437
ENSMUSG00000066842	protein_coding	Hmcn1	ENSMUST00000155715	retained_intron		1	-1	150993435	3400
ENSMUSG00000040521	protein_coding	Tsfm	ENSMUST00000120547	protein_coding		10	-1	127030799	1271
ENSMUSG00000111275	lincRNA	Gm29824	ENSMUST00000213183	lincRNA		9	1	24776467	3285
ENSMUSG00000090105	antisense	Gm15890	ENSMUST00000161024	antisense		8	-1	94386972	770
ENSMUSG00000028862	protein_coding	Map3k6	ENSMUST00000134895	processed_transcript		4	1	133250849	1062
ENSMUSG00000039621	protein_coding	Prex1	ENSMUST00000152238	processed_transcript		2	-1	166703594	467
ENSMUSG00000111507	processed_pseudogene	Amd-ps6	ENSMUST00000214455	processed_pseudogene		9	-1	24827345	1003
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000209441	retained_intron		8	-1	25162571	3469
ENSMUSG00000089712	lincRNA	Gm15889	ENSMUST00000212669	lincRNA		8	1	94377872	2443
ENSMUSG00000040521	protein_coding	Tsfm	ENSMUST00000134917	retained_intron		10	-1	127030803	695
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000210645	retained_intron		8	-1	25167533	797
ENSMUSG00000039621	protein_coding	Prex1	ENSMUST00000136564	retained_intron		2	-1	166603087	430
ENSMUSG00000110872	processed_pseudogene	Gm48255	ENSMUST00000217324	processed_pseudogene		9	1	24952973	327
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000210016	protein_coding		8	-1	25241752	656
ENSMUSG00000089712	lincRNA	Gm15889	ENSMUST00000159142	lincRNA		8	1	94377921	1083
ENSMUSG00000054203	protein_coding	Ifi205	ENSMUST00000192166	retained_intron		1	-1	174031810	3274
ENSMUSG00000107582	transcribed_unprocessed_pseudogene	Gm44133	ENSMUST00000204450	transcribed_unprocessed_pseudogene		6	-1	131002547	2586
ENSMUSG00000022401	protein_coding	Xpnpep3	ENSMUST00000041609	protein_coding		15	1	81400188	3236
ENSMUSG00000111680	processed_pseudogene	Gm18377	ENSMUST00000215141	processed_pseudogene		9	-1	24958186	607
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000108681	protein_coding	principal1	11	1	67455091	1941
ENSMUSG00000087690	antisense	Gm16031	ENSMUST00000153253	antisense		15	-1	101131592	448
ENSMUSG00000039621	protein_coding	Prex1	ENSMUST00000136974	processed_transcript		2	-1	166572977	929
ENSMUSG00000104949	processed_pseudogene	Hcfc1r1-ps2	ENSMUST00000199379	processed_pseudogene		17	1	53788923	339
ENSMUSG00000107582	transcribed_unprocessed_pseudogene	Gm44133	ENSMUST00000203823	processed_transcript		6	-1	131003919	701
ENSMUSG00000082907	processed_pseudogene	Gm14832	ENSMUST00000121289	processed_pseudogene		X	1	100156635	322
ENSMUSG00000080813	processed_pseudogene	Gm14828	ENSMUST00000119381	processed_pseudogene		X	1	100337514	1155
ENSMUSG00000111866	lincRNA	E130101E03Rik	ENSMUST00000214469	lincRNA		9	1	24974208	1163
ENSMUSG00000081623	processed_pseudogene	Gm8809	ENSMUST00000119367	processed_pseudogene		1	-1	66032925	743
ENSMUSG00000045381	protein_coding	Olfr433	ENSMUST00000214690	protein_coding	principal1	1	1	174040705	2968
ENSMUSG00000083242	processed_pseudogene	Gm15659	ENSMUST00000118881	processed_pseudogene		1	1	66033085	341
ENSMUSG00000083936	processed_pseudogene	Gm14829	ENSMUST00000121499	processed_pseudogene		X	1	100329692	1138
ENSMUSG00000022401	protein_coding	Xpnpep3	ENSMUST00000165258	nonsense_mediated_decay		15	1	81400196	1641
ENSMUSG00000028161	protein_coding	Ppp3ca	ENSMUST00000070198	protein_coding	alternative1	3	1	136670124	4758
ENSMUSG00000022401	protein_coding	Xpnpep3	ENSMUST00000167799	processed_transcript		15	1	81400197	771
ENSMUSG00000105324	lincRNA	Gm42705	ENSMUST00000200176	lincRNA		3	1	143743377	2465
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000211622	nonsense_mediated_decay		8	-1	25201449	1661
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000136796	nonsense_mediated_decay		11	1	67455181	1118
ENSMUSG00000045381	protein_coding	Olfr433	ENSMUST00000052975	protein_coding	principal1	1	1	174041118	2406
ENSMUSG00000106524	lincRNA	Gm42706	ENSMUST00000199733	lincRNA		3	1	143770539	1910
ENSMUSG00000051036	protein_coding	Ttc24	ENSMUST00000238487	processed_transcript		3	-1	88078304	2251
ENSMUSG00000091492	antisense	Gm17025	ENSMUST00000133273	antisense		15	-1	81419188	580
ENSMUSG00000042901	protein_coding	Aida	ENSMUST00000109166	protein_coding	principal1	1	1	183297049	4279
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000210933	protein_coding		8	-1	25240901	375
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000112010	protein_coding		2	-1	73892536	4037
ENSMUSG00000111849	lincRNA	Gm47186	ENSMUST00000213494	lincRNA		9	-1	44423391	589
ENSMUSG00000030897	protein_coding	Cnga4	ENSMUST00000033187	protein_coding	principal1	7	1	105404568	2484
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000041611	protein_coding		11	1	67547154	2968
ENSMUSG00000047108	protein_coding	Dnajb7	ENSMUST00000057236	protein_coding	principal1	15	-1	81408299	1374
ENSMUSG00000042901	protein_coding	Aida	ENSMUST00000191782	processed_transcript		1	1	183297327	426
ENSMUSG00000105885	unprocessed_pseudogene	Sult1c2-ps2	ENSMUST00000196414	unprocessed_pseudogene		17	1	53802860	276
ENSMUSG00000068290	protein_coding	Ddrgk1	ENSMUST00000124559	processed_transcript		2	-1	130663819	893
ENSMUSG00000051036	protein_coding	Ttc24	ENSMUST00000064550	processed_transcript		3	-1	88072060	671
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000090802	protein_coding		2	-1	73892612	4016
ENSMUSG00000051036	protein_coding	Ttc24	ENSMUST00000238508	transcribed_unitary_pseudogene		3	-1	88075517	1599
ENSMUSG00000028161	protein_coding	Ppp3ca	ENSMUST00000056758	protein_coding	principal3	3	1	136670770	2194
ENSMUSG00000068037	protein_coding	Mas1	ENSMUST00000089015	protein_coding	principal1	17	-1	12868143	2401
ENSMUSG00000042901	protein_coding	Aida	ENSMUST00000193625	protein_coding		1	1	183297405	1810
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000129801	processed_transcript		11	1	67547453	785
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000210767	nonsense_mediated_decay		8	-1	25256569	552
ENSMUSG00000105729	TEC	5330425B07Rik	ENSMUST00000196714	TEC		3	1	116148110	1027
ENSMUSG00000030897	protein_coding	Cnga4	ENSMUST00000210344	protein_coding		7	1	105404622	1977
ENSMUSG00000081639	processed_pseudogene	Gm14973	ENSMUST00000117248	processed_pseudogene		X	1	126953192	255
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000145496	processed_transcript		11	1	67586500	2628
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000210488	protein_coding		8	-1	25240863	479
ENSMUSG00000068290	protein_coding	Ddrgk1	ENSMUST00000134044	nonsense_mediated_decay		2	-1	130661741	421
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000108680	protein_coding		11	1	67586701	1466
ENSMUSG00000103725	processed_pseudogene	Gm7103	ENSMUST00000195642	processed_pseudogene		3	1	8214332	1852
ENSMUSG00000080888	unprocessed_pseudogene	Gm14387	ENSMUST00000121827	unprocessed_pseudogene		2	1	175086501	2055
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000209827	nonsense_mediated_decay		8	-1	25256588	515
ENSMUSG00000040848	protein_coding	Sft2d2	ENSMUST00000043338	protein_coding	principal1	1	-1	165194438	5535
ENSMUSG00000031410	protein_coding	Nxf7	ENSMUST00000113163	protein_coding	principal1	X	-1	135598777	2233
ENSMUSG00000103921	processed_pseudogene	Gm5841	ENSMUST00000195307	processed_pseudogene		3	1	8327531	2177
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000211584	processed_transcript		8	-1	25201408	457
ENSMUSG00000028161	protein_coding	Ppp3ca	ENSMUST00000124777	processed_transcript		3	1	136834693	713
ENSMUSG00000081949	processed_pseudogene	Gm14392	ENSMUST00000120332	processed_pseudogene		2	-1	175110015	401
ENSMUSG00000031410	protein_coding	Nxf7	ENSMUST00000137977	protein_coding		X	-1	135588980	1659
ENSMUSG00000028161	protein_coding	Ppp3ca	ENSMUST00000196170	retained_intron		3	1	136880434	2647
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000209633	retained_intron		8	-1	25200543	1050
ENSMUSG00000097362	lincRNA	Gm26544	ENSMUST00000181404	lincRNA		3	1	116150479	2763
ENSMUSG00000028161	protein_coding	Ppp3ca	ENSMUST00000196603	retained_intron		3	1	136887949	2038
ENSMUSG00000065954	protein_coding	Tacc1	ENSMUST00000211218	retained_intron		8	-1	25201402	943
ENSMUSG00000068290	protein_coding	Ddrgk1	ENSMUST00000135072	protein_coding		2	-1	130664165	449
ENSMUSG00000028161	protein_coding	Ppp3ca	ENSMUST00000130768	processed_transcript		3	1	136902333	412
ENSMUSG00000104607	lincRNA	Gm31651	ENSMUST00000198864	lincRNA		3	1	116200408	560
ENSMUSG00000031410	protein_coding	Nxf7	ENSMUST00000127202	retained_intron		X	-1	135586133	792
ENSMUSG00000068037	protein_coding	Mas1	ENSMUST00000162333	protein_coding	principal1	17	-1	12854460	1750
ENSMUSG00000028161	protein_coding	Ppp3ca	ENSMUST00000130114	retained_intron		3	1	136903149	441
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000151784	processed_transcript		11	1	67596564	750
ENSMUSG00000068037	protein_coding	Mas1	ENSMUST00000161747	protein_coding	principal1	17	-1	12854460	1687
ENSMUSG00000090093	protein_coding	Gm14399	ENSMUST00000109060	protein_coding	principal1	2	-1	175142012	1911
ENSMUSG00000031410	protein_coding	Nxf7	ENSMUST00000141310	protein_coding		X	-1	135596707	566
ENSMUSG00000068290	protein_coding	Ddrgk1	ENSMUST00000135167	processed_transcript		2	-1	130657357	518
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000147276	processed_transcript		11	1	67596574	721
ENSMUSG00000105545	TEC	4930599N24Rik	ENSMUST00000198822	TEC		3	-1	136759960	1003
ENSMUSG00000048794	protein_coding	Cfap100	ENSMUST00000062750	protein_coding	alternative2	6	-1	90428432	1803
ENSMUSG00000068037	protein_coding	Mas1	ENSMUST00000233607	protein_coding	principal1	17	-1	12854460	1699
ENSMUSG00000090093	protein_coding	Gm14399	ENSMUST00000109059	protein_coding		2	-1	175141999	703
ENSMUSG00000031410	protein_coding	Nxf7	ENSMUST00000150900	protein_coding		X	-1	135598758	586
ENSMUSG00000108066	transcribed_unprocessed_pseudogene	Gm44134	ENSMUST00000204777	transcribed_unprocessed_pseudogene		6	-1	131051507	545
ENSMUSG00000090093	protein_coding	Gm14399	ENSMUST00000109062	protein_coding		2	-1	175141999	626
ENSMUSG00000089889	antisense	0610040B10Rik	ENSMUST00000160231	antisense		5	1	143329247	501
ENSMUSG00000062372	protein_coding	Otof	ENSMUST00000144125	retained_intron		5	-1	30461932	7419
ENSMUSG00000090093	protein_coding	Gm14399	ENSMUST00000108929	protein_coding		2	-1	175131864	813
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000140863	processed_transcript		11	1	67652577	1479
ENSMUSG00000089889	antisense	0610040B10Rik	ENSMUST00000198455	antisense		5	1	143329308	1643
ENSMUSG00000090093	protein_coding	Gm14399	ENSMUST00000099029	protein_coding		2	-1	175133322	192
ENSMUSG00000021264	protein_coding	Yy1	ENSMUST00000021692	protein_coding	principal1	12	1	108792973	6178
ENSMUSG00000062372	protein_coding	Otof	ENSMUST00000150734	retained_intron		5	-1	30461859	7063
ENSMUSG00000040848	protein_coding	Sft2d2	ENSMUST00000192185	nonsense_mediated_decay		1	-1	165194321	3798
ENSMUSG00000068037	protein_coding	Mas1	ENSMUST00000162119	protein_coding		17	-1	12851907	779
ENSMUSG00000082690	processed_pseudogene	Gm14972	ENSMUST00000121780	processed_pseudogene		X	-1	126968086	364
ENSMUSG00000031410	protein_coding	Nxf7	ENSMUST00000033784	protein_coding	principal1	X	-1	135593855	1863
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000133367	processed_transcript		11	1	67682172	789
ENSMUSG00000089889	antisense	0610040B10Rik	ENSMUST00000162890	antisense		5	1	143329327	600
ENSMUSG00000068037	protein_coding	Mas1	ENSMUST00000162389	protein_coding		17	-1	12851893	443
ENSMUSG00000039728	protein_coding	Slc6a5	ENSMUST00000056442	protein_coding	principal1	7	1	49910146	7065
ENSMUSG00000062372	protein_coding	Otof	ENSMUST00000128177	retained_intron		5	-1	30408061	686
ENSMUSG00000068037	protein_coding	Mas1	ENSMUST00000159223	protein_coding		17	-1	12851907	684
ENSMUSG00000108066	transcribed_unprocessed_pseudogene	Gm44134	ENSMUST00000203064	processed_transcript		6	-1	131052469	661
ENSMUSG00000025935	protein_coding	Tram1	ENSMUST00000027068	protein_coding	principal1	1	-1	13589910	2938
ENSMUSG00000021264	protein_coding	Yy1	ENSMUST00000126912	retained_intron		12	1	108806239	715
ENSMUSG00000033066	protein_coding	Gas7	ENSMUST00000108682	protein_coding		11	1	67586536	7067
ENSMUSG00000068037	protein_coding	Mas1	ENSMUST00000159865	protein_coding		17	-1	12855041	409
ENSMUSG00000040848	protein_coding	Sft2d2	ENSMUST00000192565	nonsense_mediated_decay		1	-1	165194317	680
ENSMUSG00000083289	processed_pseudogene	Gm8812	ENSMUST00000118496	processed_pseudogene		1	1	66062965	412
ENSMUSG00000086500	bidirectional_promoter_lncRNA	Gm15875	ENSMUST00000152264	bidirectional_promoter_lncRNA		8	-1	11840400	273
ENSMUSG00000042901	protein_coding	Aida	ENSMUST00000193959	nonsense_mediated_decay		1	1	183297570	724
ENSMUSG00000068037	protein_coding	Mas1	ENSMUST00000167152	protein_coding	principal1	17	-1	12854340	1670
ENSMUSG00000042901	protein_coding	Aida	ENSMUST00000194652	retained_intron		1	1	183304632	668
ENSMUSG00000047667	protein_coding	Olfr26	ENSMUST00000104874	protein_coding	principal1	9	1	38855060	931
ENSMUSG00000025935	protein_coding	Tram1	ENSMUST00000185447	retained_intron		1	-1	13579798	594
ENSMUSG00000062791	protein_coding	Gm382	ENSMUST00000096332	protein_coding	principal1	X	1	127039972	4070
ENSMUSG00000051036	protein_coding	Ttc24	ENSMUST00000050258	protein_coding	principal1	3	-1	88078304	2251
ENSMUSG00000042901	protein_coding	Aida	ENSMUST00000193359	retained_intron		1	1	183306291	1894
ENSMUSG00000068037	protein_coding	Mas1	ENSMUST00000165020	protein_coding	principal1	17	-1	12848120	1675
ENSMUSG00000097974	lincRNA	Gm10605	ENSMUST00000183019	lincRNA		7	1	99625936	3198
ENSMUSG00000056413	protein_coding	Adap1	ENSMUST00000151450	processed_transcript		5	-1	139306319	2155
ENSMUSG00000030292	protein_coding	Smco2	ENSMUST00000032433	protein_coding	principal1	6	1	146850104	1276
ENSMUSG00000042901	protein_coding	Aida	ENSMUST00000192293	retained_intron		1	1	183306431	710
ENSMUSG00000111453	unprocessed_pseudogene	Olfr925-ps1	ENSMUST00000217295	unprocessed_pseudogene		9	1	38868866	780
ENSMUSG00000039728	protein_coding	Slc6a5	ENSMUST00000209172	nonsense_mediated_decay		7	1	49910299	2409
ENSMUSG00000035878	protein_coding	Hykk	ENSMUST00000039742	protein_coding	principal1	9	1	54917283	5110
ENSMUSG00000087588	processed_pseudogene	Gm16355	ENSMUST00000128606	processed_pseudogene		2	1	175153998	231
ENSMUSG00000117030	lincRNA	Gm49959	ENSMUST00000232857	lincRNA		17	-1	12791660	254
ENSMUSG00000097974	lincRNA	Gm10605	ENSMUST00000182342	lincRNA		7	1	99626139	665
ENSMUSG00000025935	protein_coding	Tram1	ENSMUST00000188377	nonsense_mediated_decay		1	-1	13589875	498
ENSMUSG00000090688	protein_coding	Vmn2r12	ENSMUST00000095922	protein_coding	principal1	5	-1	109097950	4607
ENSMUSG00000039728	protein_coding	Slc6a5	ENSMUST00000207753	protein_coding	principal1	7	1	49910769	6966
ENSMUSG00000042901	protein_coding	Aida	ENSMUST00000195268	retained_intron		1	1	183322113	626
ENSMUSG00000049815	protein_coding	4921511C20Rik	ENSMUST00000051530	protein_coding	principal1	X	1	127394293	1606
ENSMUSG00000001228	protein_coding	Uhrf1	ENSMUST00000001258	protein_coding	principal3	17	1	56303321	3586
ENSMUSG00000030292	protein_coding	Smco2	ENSMUST00000128575	retained_intron		6	1	146850157	351
ENSMUSG00000052504	protein_coding	Epha3	ENSMUST00000064405	protein_coding	principal2	16	-1	63864158	5663
ENSMUSG00000030292	protein_coding	Smco2	ENSMUST00000205239	processed_transcript		6	1	146856861	472
ENSMUSG00000078902	protein_coding	Gm14443	ENSMUST00000127251	retained_intron		2	-1	175172317	1436
ENSMUSG00000052504	protein_coding	Epha3	ENSMUST00000232049	protein_coding	alternative1	16	-1	63864080	3011
ENSMUSG00000020907	protein_coding	Rcvrn	ENSMUST00000021290	protein_coding	principal1	11	1	67695326	1040
ENSMUSG00000078902	protein_coding	Gm14443	ENSMUST00000109054	protein_coding	principal1	2	-1	175175871	4516
ENSMUSG00000035878	protein_coding	Hykk	ENSMUST00000125983	retained_intron		9	1	54917311	4023
ENSMUSG00000030292	protein_coding	Smco2	ENSMUST00000148099	processed_transcript		6	1	146861800	478
ENSMUSG00000052504	protein_coding	Epha3	ENSMUST00000232654	protein_coding		16	-1	63864157	2338
ENSMUSG00000096606	protein_coding	Tpbgl	ENSMUST00000178124	protein_coding	principal1	7	-1	99627103	3022
ENSMUSG00000068290	protein_coding	Ddrgk1	ENSMUST00000089559	protein_coding	principal1	2	-1	130664659	1238
ENSMUSG00000040620	protein_coding	Dhx33	ENSMUST00000108527	protein_coding	principal1	11	-1	71004437	5184
ENSMUSG00000082382	processed_pseudogene	Gm14970	ENSMUST00000122289	processed_pseudogene		X	-1	127446916	355
ENSMUSG00000102463	processed_pseudogene	1700003N22Rik	ENSMUST00000194834	processed_pseudogene		3	-1	8463035	808
ENSMUSG00000035878	protein_coding	Hykk	ENSMUST00000124295	retained_intron		9	1	54917312	4679
ENSMUSG00000091636	protein_coding	Akain1	ENSMUST00000169935	protein_coding	principal1	17	1	69439326	2296
ENSMUSG00000108054	processed_pseudogene	Gm44149	ENSMUST00000204256	processed_pseudogene		6	1	131071820	226
ENSMUSG00000052504	protein_coding	Epha3	ENSMUST00000232461	protein_coding		16	-1	63863413	811
ENSMUSG00000090894	protein_coding	Olfr110	ENSMUST00000168318	protein_coding	principal1	17	1	37492468	1639
ENSMUSG00000039728	protein_coding	Slc6a5	ENSMUST00000107605	protein_coding	principal1	7	1	49911700	2467
ENSMUSG00000115087	TEC	Gm48998	ENSMUST00000228170	TEC		14	-1	78600476	2707
ENSMUSG00000068290	protein_coding	Ddrgk1	ENSMUST00000153271	retained_intron		2	-1	130654777	404
ENSMUSG00000044309	protein_coding	Apol7c	ENSMUST00000062562	protein_coding	principal1	15	-1	77533316	2060
ENSMUSG00000109609	processed_pseudogene	Gm4972	ENSMUST00000211108	processed_pseudogene		7	-1	105413973	1254
ENSMUSG00000107464	unprocessed_pseudogene	Gm44150	ENSMUST00000203317	unprocessed_pseudogene		6	-1	131104337	2619
ENSMUSG00000035878	protein_coding	Hykk	ENSMUST00000135648	processed_transcript		9	1	54917347	1506
ENSMUSG00000043569	protein_coding	Cldn34c4	ENSMUST00000052500	protein_coding	principal1	X	-1	127736554	814
ENSMUSG00000052504	protein_coding	Epha3	ENSMUST00000231270	nonsense_mediated_decay		16	-1	63864136	762
ENSMUSG00000001228	protein_coding	Uhrf1	ENSMUST00000113038	protein_coding	alternative2	17	1	56303400	3483
ENSMUSG00000105492	processed_pseudogene	Gm2505	ENSMUST00000200413	processed_pseudogene		3	1	143872995	825
ENSMUSG00000081355	unprocessed_pseudogene	Gm15264	ENSMUST00000118050	unprocessed_pseudogene		3	-1	94758116	502
ENSMUSG00000090099	unprocessed_pseudogene	Gm8837	ENSMUST00000161037	unprocessed_pseudogene		6	1	131130944	1107
ENSMUSG00000090894	protein_coding	Olfr110	ENSMUST00000216472	protein_coding	principal1	17	1	37492529	1721
ENSMUSG00000091635	protein_coding	Vmn2r13	ENSMUST00000053253	protein_coding	principal1	5	-1	109192199	5716
ENSMUSG00000091636	protein_coding	Akain1	ENSMUST00000233983	processed_transcript		17	1	69439834	2402
ENSMUSG00000052504	protein_coding	Epha3	ENSMUST00000232370	retained_intron		16	-1	63864175	2466
ENSMUSG00000104881	processed_pseudogene	Gm43711	ENSMUST00000195994	processed_pseudogene		3	1	94737343	373
ENSMUSG00000040620	protein_coding	Dhx33	ENSMUST00000146203	nonsense_mediated_decay		11	-1	70993980	1422
ENSMUSG00000044309	protein_coding	Apol7c	ENSMUST00000230863	protein_coding		15	-1	77533316	367
ENSMUSG00000048794	protein_coding	Cfap100	ENSMUST00000165673	protein_coding	principal2	6	-1	90428413	2072
ENSMUSG00000061969	transcribed_unprocessed_pseudogene	Gm5581	ENSMUST00000072940	transcribed_unprocessed_pseudogene		6	-1	131181503	2550
ENSMUSG00000104865	lincRNA	Gm42708	ENSMUST00000196332	lincRNA		3	1	143898047	905
ENSMUSG00000001228	protein_coding	Uhrf1	ENSMUST00000113035	protein_coding	alternative2	17	1	56304313	3402
ENSMUSG00000111751	lincRNA	Gm48256	ENSMUST00000215876	lincRNA		9	1	25057050	756
ENSMUSG00000083250	processed_pseudogene	Gm5403	ENSMUST00000117105	processed_pseudogene		X	-1	128061325	2795
ENSMUSG00000117053	antisense	A730049N16Rik	ENSMUST00000232967	antisense		17	-1	69475875	822
ENSMUSG00000105811	lincRNA	Gm42707	ENSMUST00000196668	lincRNA		3	-1	143954774	618
ENSMUSG00000061969	transcribed_unprocessed_pseudogene	Gm5581	ENSMUST00000204992	processed_transcript		6	-1	131182379	714
ENSMUSG00000117122	processed_pseudogene	Gm9319	ENSMUST00000233087	processed_pseudogene		17	1	69554230	532
ENSMUSG00000064333	protein_coding	Olfr926	ENSMUST00000078289	protein_coding	principal1	9	1	38877126	1051
ENSMUSG00000102603	unprocessed_pseudogene	Olfr431-ps1	ENSMUST00000192435	unprocessed_pseudogene		1	1	174051998	544
ENSMUSG00000105811	lincRNA	Gm42707	ENSMUST00000196620	lincRNA		3	-1	143954398	322
ENSMUSG00000033105	protein_coding	Lss	ENSMUST00000048678	protein_coding	principal1	10	1	76531607	4667
ENSMUSG00000117071	processed_pseudogene	Gm9598	ENSMUST00000233261	processed_pseudogene		17	1	69570406	776
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000055833	protein_coding	principal3	2	-1	73892614	4210
ENSMUSG00000078903	protein_coding	Gm14391	ENSMUST00000151240	retained_intron		2	-1	175206876	5536
ENSMUSG00000001228	protein_coding	Uhrf1	ENSMUST00000113039	protein_coding	principal3	17	1	56304348	3391
ENSMUSG00000040620	protein_coding	Dhx33	ENSMUST00000049048	nonsense_mediated_decay		11	-1	71004340	2266
ENSMUSG00000031770	protein_coding	Herpud1	ENSMUST00000161576	protein_coding	principal2	8	1	94386438	1952
ENSMUSG00000117124	lincRNA	Gm49895	ENSMUST00000233218	lincRNA		17	-1	69776012	2781
ENSMUSG00000047048	protein_coding	Olfr432	ENSMUST00000213381	protein_coding	principal1	1	1	174049205	4533
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000112007	protein_coding		2	-1	73892631	4195
ENSMUSG00000040620	protein_coding	Dhx33	ENSMUST00000124464	protein_coding		11	-1	71004420	1835
ENSMUSG00000047048	protein_coding	Olfr432	ENSMUST00000213211	protein_coding	principal1	1	1	174049205	4435
ENSMUSG00000001228	protein_coding	Uhrf1	ENSMUST00000142387	protein_coding		17	1	56304407	529
ENSMUSG00000040620	protein_coding	Dhx33	ENSMUST00000179635	retained_intron		11	-1	70995188	3474
ENSMUSG00000117233	lincRNA	Gm36594	ENSMUST00000232745	lincRNA		17	-1	69923995	1450
ENSMUSG00000048794	protein_coding	Cfap100	ENSMUST00000134224	protein_coding		6	-1	90428797	849
ENSMUSG00000031770	protein_coding	Herpud1	ENSMUST00000034220	protein_coding	alternative1	8	1	94386495	1873
ENSMUSG00000001228	protein_coding	Uhrf1	ENSMUST00000137876	retained_intron		17	1	56312663	441
ENSMUSG00000047048	protein_coding	Olfr432	ENSMUST00000062665	protein_coding	principal1	1	1	174050375	939
ENSMUSG00000033105	protein_coding	Lss	ENSMUST00000160671	retained_intron		10	1	76531612	6992
ENSMUSG00000040620	protein_coding	Dhx33	ENSMUST00000155044	nonsense_mediated_decay		11	-1	70995993	565
ENSMUSG00000048794	protein_coding	Cfap100	ENSMUST00000127508	protein_coding		6	-1	90428435	417
ENSMUSG00000078903	protein_coding	Gm14391	ENSMUST00000109056	protein_coding		2	-1	175206917	1956
ENSMUSG00000048794	protein_coding	Cfap100	ENSMUST00000135757	protein_coding		6	-1	90428395	289
ENSMUSG00000033105	protein_coding	Lss	ENSMUST00000159172	retained_intron		10	1	76531682	641
ENSMUSG00000040620	protein_coding	Dhx33	ENSMUST00000178111	retained_intron		11	-1	70994017	750
ENSMUSG00000001228	protein_coding	Uhrf1	ENSMUST00000139654	retained_intron		17	1	56318026	949
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000112016	protein_coding	alternative2	2	-1	73892639	3943
ENSMUSG00000033105	protein_coding	Lss	ENSMUST00000163049	protein_coding		10	1	76541882	314
ENSMUSG00000048794	protein_coding	Cfap100	ENSMUST00000128124	processed_transcript		6	-1	90428585	253
ENSMUSG00000106037	processed_pseudogene	Gm4332	ENSMUST00000196114	processed_pseudogene		3	1	119709516	346
ENSMUSG00000031770	protein_coding	Herpud1	ENSMUST00000161085	nonsense_mediated_decay		8	1	94387553	731
ENSMUSG00000078903	protein_coding	Gm14391	ENSMUST00000109055	protein_coding		2	-1	175206899	965
ENSMUSG00000091059	protein_coding	Vmn2r14	ENSMUST00000170341	protein_coding	principal1	5	-1	109224708	6601
ENSMUSG00000040620	protein_coding	Dhx33	ENSMUST00000123860	processed_transcript		11	-1	71000954	700
ENSMUSG00000033105	protein_coding	Lss	ENSMUST00000162848	retained_intron		10	1	76551210	4871
ENSMUSG00000078903	protein_coding	Gm14391	ENSMUST00000099028	protein_coding		2	-1	175206903	473
ENSMUSG00000078903	protein_coding	Gm14391	ENSMUST00000109058	protein_coding	principal1	2	-1	175206917	1854
ENSMUSG00000033105	protein_coding	Lss	ENSMUST00000162282	retained_intron		10	1	76552271	425
ENSMUSG00000040620	protein_coding	Dhx33	ENSMUST00000178218	retained_intron		11	-1	71004437	2885
ENSMUSG00000078903	protein_coding	Gm14391	ENSMUST00000165892	protein_coding	principal1	2	-1	175203061	1665
ENSMUSG00000091059	protein_coding	Vmn2r14	ENSMUST00000233137	nonsense_mediated_decay		5	-1	109224708	5705
ENSMUSG00000082376	unprocessed_pseudogene	Gm14442	ENSMUST00000119690	unprocessed_pseudogene		2	-1	175231291	1736
ENSMUSG00000093543	processed_pseudogene	Gm8473	ENSMUST00000176697	processed_pseudogene		5	1	109236544	1885
ENSMUSG00000086241	antisense	4930483K19Rik	ENSMUST00000127576	antisense		10	-1	76562226	1237
ENSMUSG00000031770	protein_coding	Herpud1	ENSMUST00000159450	nonsense_mediated_decay		8	1	94387599	631
ENSMUSG00000078945	protein_coding	Naip2	ENSMUST00000117913	protein_coding	principal2	13	-1	100202092	4823
ENSMUSG00000031701	protein_coding	Dnaja2	ENSMUST00000034138	protein_coding	principal1	8	-1	85555344	2919
ENSMUSG00000078945	protein_coding	Naip2	ENSMUST00000167986	protein_coding	alternative2	13	-1	100201961	4356
ENSMUSG00000082971	processed_pseudogene	Gm13517	ENSMUST00000120782	processed_pseudogene		2	1	55775548	1495
ENSMUSG00000031770	protein_coding	Herpud1	ENSMUST00000211982	protein_coding		8	1	94390790	823
ENSMUSG00000068696	protein_coding	Gpr88	ENSMUST00000090473	protein_coding	principal1	3	-1	116253503	3469
ENSMUSG00000021900	protein_coding	Btd	ENSMUST00000128014	processed_transcript		14	1	31641028	689
ENSMUSG00000034457	protein_coding	Eda2r	ENSMUST00000037353	protein_coding	principal1	X	-1	97377216	4752
ENSMUSG00000031701	protein_coding	Dnaja2	ENSMUST00000211630	retained_intron		8	-1	85553466	507
ENSMUSG00000031770	protein_coding	Herpud1	ENSMUST00000160866	retained_intron		8	1	94393531	690
ENSMUSG00000056413	protein_coding	Adap1	ENSMUST00000110865	protein_coding	principal1	5	-1	139325622	2557
ENSMUSG00000049928	protein_coding	Glp2r	ENSMUST00000021289	protein_coding		11	-1	67757703	1738
ENSMUSG00000110341	TEC	Gm45424	ENSMUST00000210575	TEC		8	1	85599832	3300
ENSMUSG00000068696	protein_coding	Gpr88	ENSMUST00000197759	protein_coding		3	-1	116253089	205
ENSMUSG00000109731	lincRNA	Gm45425	ENSMUST00000211727	lincRNA		8	1	85605462	618
ENSMUSG00000068696	protein_coding	Gpr88	ENSMUST00000199128	processed_transcript		3	-1	116253463	404
ENSMUSG00000056413	protein_coding	Adap1	ENSMUST00000196271	processed_transcript		5	-1	139303150	1241
ENSMUSG00000036932	protein_coding	Aifm1	ENSMUST00000143466	retained_intron		X	-1	48513426	3364
ENSMUSG00000078945	protein_coding	Naip2	ENSMUST00000067975	protein_coding	principal2	13	-1	100197147	4709
ENSMUSG00000056413	protein_coding	Adap1	ENSMUST00000126762	processed_transcript		5	-1	139306291	1402
ENSMUSG00000034457	protein_coding	Eda2r	ENSMUST00000126283	retained_intron		X	-1	97377216	2153
ENSMUSG00000027500	protein_coding	Stmn2	ENSMUST00000029002	protein_coding	principal1	3	1	8509360	2073
ENSMUSG00000075602	protein_coding	Ly6a	ENSMUST00000189068	protein_coding	principal1	15	-1	74997907	878
ENSMUSG00000056413	protein_coding	Adap1	ENSMUST00000123748	retained_intron		5	-1	139274641	643
ENSMUSG00000106099	sense_intronic	Gm42664	ENSMUST00000199417	sense_intronic		3	-1	119746446	3239
ENSMUSG00000056413	protein_coding	Adap1	ENSMUST00000156815	retained_intron		5	-1	139307809	539
ENSMUSG00000034457	protein_coding	Eda2r	ENSMUST00000126609	retained_intron		X	-1	97377172	779
ENSMUSG00000105572	TEC	Gm43300	ENSMUST00000198540	TEC		3	-1	119729790	2043
ENSMUSG00000021832	protein_coding	Psmc6	ENSMUST00000022380	protein_coding	principal1	14	1	45329788	2234
ENSMUSG00000031134	protein_coding	Rbmx	ENSMUST00000140384	nonsense_mediated_decay		X	-1	57392981	2139
ENSMUSG00000027500	protein_coding	Stmn2	ENSMUST00000191847	retained_intron		3	1	8509515	3413
ENSMUSG00000070388	protein_coding	Fbxo39	ENSMUST00000108504	protein_coding	principal1	11	1	72314444	1708
ENSMUSG00000021900	protein_coding	Btd	ENSMUST00000090147	protein_coding	principal1	14	1	31641057	2324
ENSMUSG00000082610	processed_pseudogene	Gm13829	ENSMUST00000119600	processed_pseudogene		5	-1	115291900	138
ENSMUSG00000027500	protein_coding	Stmn2	ENSMUST00000194905	retained_intron		3	1	8509586	642
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000080560	protein_coding	principal3	9	-1	107710475	3395
ENSMUSG00000097160	antisense	A630072L19Rik	ENSMUST00000180617	antisense		12	1	100941742	3405
ENSMUSG00000027500	protein_coding	Stmn2	ENSMUST00000194307	processed_transcript		3	1	8560266	308
ENSMUSG00000085815	transcribed_processed_pseudogene	Gm13548	ENSMUST00000144688	transcribed_processed_pseudogene		2	-1	52739455	385
ENSMUSG00000075602	protein_coding	Ly6a	ENSMUST00000187994	protein_coding	principal1	15	-1	74998031	955
ENSMUSG00000091375	protein_coding	Vmn2r15	ENSMUST00000167133	protein_coding	principal2	5	-1	109297644	3255
ENSMUSG00000097160	antisense	A630072L19Rik	ENSMUST00000221309	antisense		12	1	100941857	1519
ENSMUSG00000034457	protein_coding	Eda2r	ENSMUST00000113832	protein_coding	principal1	X	-1	97377150	1433
ENSMUSG00000075602	protein_coding	Ly6a	ENSMUST00000186526	protein_coding	principal1	15	-1	74997928	862
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000192727	protein_coding	alternative2	9	-1	107705556	2383
ENSMUSG00000113634	antisense	Gm36756	ENSMUST00000223029	antisense		12	1	100986623	1166
ENSMUSG00000091375	protein_coding	Vmn2r15	ENSMUST00000232771	nonsense_mediated_decay		5	-1	109297644	3461
ENSMUSG00000113634	antisense	Gm36756	ENSMUST00000222011	antisense		12	1	100986644	1214
ENSMUSG00000113634	antisense	Gm36756	ENSMUST00000222768	antisense		12	1	100992972	928
ENSMUSG00000091375	protein_coding	Vmn2r15	ENSMUST00000233141	protein_coding	alternative2	5	-1	109297644	3231
ENSMUSG00000028680	protein_coding	Plk3	ENSMUST00000126135	processed_transcript		4	-1	117133944	2512
ENSMUSG00000091375	protein_coding	Vmn2r15	ENSMUST00000232780	nonsense_mediated_decay		5	-1	109297644	3585
ENSMUSG00000025321	protein_coding	Itgb8	ENSMUST00000026360	protein_coding	principal1	12	-1	119238802	8403
ENSMUSG00000049928	protein_coding	Glp2r	ENSMUST00000051765	protein_coding	principal1	11	-1	67771153	4873
ENSMUSG00000091375	protein_coding	Vmn2r15	ENSMUST00000233813	protein_coding		5	-1	109297644	3355
ENSMUSG00000091375	protein_coding	Vmn2r15	ENSMUST00000233282	protein_coding	alternative2	5	-1	109297644	3228
ENSMUSG00000075602	protein_coding	Ly6a	ENSMUST00000187171	protein_coding	principal1	15	-1	74997987	853
ENSMUSG00000113634	antisense	Gm36756	ENSMUST00000223241	antisense		12	1	101006987	540
ENSMUSG00000114680	lincRNA	Gm47202	ENSMUST00000223738	lincRNA		14	-1	64537538	1836
ENSMUSG00000075602	protein_coding	Ly6a	ENSMUST00000190188	protein_coding		15	-1	74997835	336
ENSMUSG00000021832	protein_coding	Psmc6	ENSMUST00000228300	nonsense_mediated_decay		14	1	45329828	383
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000195267	retained_intron		9	-1	107684761	1084
ENSMUSG00000025321	protein_coding	Itgb8	ENSMUST00000137804	retained_intron		12	-1	119238770	2304
ENSMUSG00000075602	protein_coding	Ly6a	ENSMUST00000023248	protein_coding	principal1	15	-1	74997634	819
ENSMUSG00000087058	antisense	Gm12301	ENSMUST00000152963	antisense		11	-1	67577466	523
ENSMUSG00000115436	processed_pseudogene	Gm8353	ENSMUST00000226636	processed_pseudogene		14	-1	47420189	432
ENSMUSG00000023122	protein_coding	Sult1c2	ENSMUST00000023886	protein_coding	principal1	17	-1	53846339	1846
ENSMUSG00000025321	protein_coding	Itgb8	ENSMUST00000151023	retained_intron		12	-1	119238801	3676
ENSMUSG00000087636	processed_pseudogene	Gm4660	ENSMUST00000131499	processed_pseudogene		16	-1	60398322	403
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000156455	processed_transcript		2	-1	73892628	4003
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000173010	nonsense_mediated_decay		2	-1	73863238	1658
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000161203	protein_coding	principal1	9	-1	45906869	3294
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000194039	nonsense_mediated_decay		9	-1	107710019	2972
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000162205	processed_transcript		6	1	119902698	410
ENSMUSG00000031134	protein_coding	Rbmx	ENSMUST00000098470	protein_coding		X	-1	57393036	3107
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000194424	nonsense_mediated_decay		9	-1	107687317	711
ENSMUSG00000031134	protein_coding	Rbmx	ENSMUST00000114730	protein_coding	principal1	X	-1	57392962	2019
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000194846	retained_intron		9	-1	107684797	695
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000192157	retained_intron		9	-1	107684771	376
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000143714	processed_transcript		2	-1	73892613	3641
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000136958	protein_coding		2	-1	73892530	935
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000141050	processed_transcript		2	-1	73892628	1604
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000154456	protein_coding		2	-1	73892593	775
ENSMUSG00000031134	protein_coding	Rbmx	ENSMUST00000114726	protein_coding	principal1	X	-1	57393036	2108
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000128531	protein_coding		2	-1	73892553	863
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000193665	processed_transcript		9	-1	107692714	1034
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000129555	processed_transcript		2	-1	73850604	658
ENSMUSG00000031134	protein_coding	Rbmx	ENSMUST00000143310	protein_coding		X	-1	57393020	1296
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000138098	processed_transcript		2	-1	73892594	656
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000192783	protein_coding		9	-1	107692642	906
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000125159	processed_transcript		2	-1	73892628	660
ENSMUSG00000026628	protein_coding	Atf3	ENSMUST00000027941	protein_coding	principal1	1	-1	191183340	1984
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000192712	retained_intron		9	-1	107689917	581
ENSMUSG00000074397	protein_coding	Foxr1	ENSMUST00000215375	protein_coding		9	-1	44440817	790
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000154965	processed_transcript		2	-1	73892550	645
ENSMUSG00000031134	protein_coding	Rbmx	ENSMUST00000133346	protein_coding		X	-1	57392797	434
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000193108	protein_coding		9	-1	107709479	685
ENSMUSG00000026628	protein_coding	Atf3	ENSMUST00000195117	protein_coding	principal1	1	-1	191218039	1906
ENSMUSG00000034684	protein_coding	Sema3f	ENSMUST00000195023	protein_coding		9	-1	107692703	443
ENSMUSG00000041733	protein_coding	Coq5	ENSMUST00000040421	protein_coding	principal1	5	1	115279666	2037
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000058720	protein_coding		9	-1	45906877	3964
ENSMUSG00000076914	TR_J_gene	Traj15	ENSMUST00000103726	TR_J_gene	principal1	14	1	54204422	60
ENSMUSG00000026628	protein_coding	Atf3	ENSMUST00000131854	processed_transcript		1	-1	191183108	517
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000161187	protein_coding		9	-1	45906407	2847
ENSMUSG00000041733	protein_coding	Coq5	ENSMUST00000201429	retained_intron		5	1	115279695	1217
ENSMUSG00000076915	TR_J_pseudogene	Traj14	ENSMUST00000103727	TR_J_pseudogene		14	1	54205111	34
ENSMUSG00000074397	protein_coding	Foxr1	ENSMUST00000098837	protein_coding	principal1	9	-1	44441136	1968
ENSMUSG00000081923	processed_pseudogene	Gm9062	ENSMUST00000117712	processed_pseudogene		X	1	97826379	727
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000162369	nonsense_mediated_decay		9	-1	45906373	3517
ENSMUSG00000041733	protein_coding	Coq5	ENSMUST00000129024	nonsense_mediated_decay		5	1	115283648	954
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000100009	protein_coding	principal3	2	-1	73863290	3936
ENSMUSG00000074397	protein_coding	Foxr1	ENSMUST00000215980	protein_coding		9	-1	44441015	676
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000084125	protein_coding	principal1	4	-1	148627019	7477
ENSMUSG00000097545	lincRNA	Mir124a-1hg	ENSMUST00000185812	lincRNA		14	1	64587331	370
ENSMUSG00000003123	protein_coding	Lipe	ENSMUST00000003207	protein_coding	principal4	7	-1	25396379	3613
ENSMUSG00000027104	protein_coding	Atf2	ENSMUST00000112017	protein_coding	principal3	2	-1	73892555	2396
ENSMUSG00000021631	processed_pseudogene	Mrps36-ps1	ENSMUST00000061311	processed_pseudogene		17	-1	53867020	306
ENSMUSG00000105732	unprocessed_pseudogene	Sult1c2-ps1	ENSMUST00000200231	unprocessed_pseudogene		17	-1	53875550	164
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000019405	protein_coding	principal2	8	1	70905932	3314
ENSMUSG00000105235	processed_pseudogene	Hcfc1r1-ps1	ENSMUST00000198911	processed_pseudogene		17	-1	53890935	346
ENSMUSG00000021832	protein_coding	Psmc6	ENSMUST00000227148	processed_transcript		14	1	45329836	830
ENSMUSG00000097545	lincRNA	Mir124a-1hg	ENSMUST00000180610	lincRNA		14	1	64588051	4103
ENSMUSG00000105921	processed_pseudogene	Mark4-ps	ENSMUST00000196140	processed_pseudogene		17	-1	53912319	384
ENSMUSG00000097545	lincRNA	Mir124a-1hg	ENSMUST00000181808	lincRNA		14	1	64588534	757
ENSMUSG00000034430	protein_coding	Zxdc	ENSMUST00000113539	protein_coding	alternative2	6	1	90369492	4864
ENSMUSG00000097545	lincRNA	Mir124a-1hg	ENSMUST00000186703	lincRNA		14	1	64589695	684
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000212697	retained_intron		8	1	70905982	396
ENSMUSG00000083972	processed_pseudogene	Gm14802	ENSMUST00000121944	processed_pseudogene		X	1	98040375	1885
ENSMUSG00000061838	protein_coding	Suclg2	ENSMUST00000204224	protein_coding	principal1	6	-1	95718800	3367
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000212544	retained_intron		8	1	70905987	438
ENSMUSG00000021832	protein_coding	Psmc6	ENSMUST00000228026	processed_transcript		14	1	45329845	844
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000211880	processed_transcript		8	1	70905990	353
ENSMUSG00000101113	protein_coding	1700025B11Rik	ENSMUST00000190233	protein_coding	principal1	15	-1	77561892	553
ENSMUSG00000021832	protein_coding	Psmc6	ENSMUST00000226431	processed_transcript		14	1	45329847	812
ENSMUSG00000061838	protein_coding	Suclg2	ENSMUST00000079847	protein_coding		6	-1	95692882	2518
ENSMUSG00000021832	protein_coding	Psmc6	ENSMUST00000228479	nonsense_mediated_decay		14	1	45329861	813
ENSMUSG00000073478	lincRNA	D730003I15Rik	ENSMUST00000139056	lincRNA		1	1	191224454	716
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000211910	nonsense_mediated_decay		8	1	70905990	331
ENSMUSG00000003123	protein_coding	Lipe	ENSMUST00000054301	protein_coding	alternative2	7	-1	25390106	2661
ENSMUSG00000021832	protein_coding	Psmc6	ENSMUST00000228831	retained_intron		14	1	45330755	777
ENSMUSG00000073478	lincRNA	D730003I15Rik	ENSMUST00000194375	lincRNA		1	1	191224474	1667
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000200097	protein_coding	alternative1	3	-1	119783804	3777
ENSMUSG00000061838	protein_coding	Suclg2	ENSMUST00000203071	processed_transcript		6	-1	95644009	622
ENSMUSG00000021832	protein_coding	Psmc6	ENSMUST00000228870	retained_intron		14	1	45334407	724
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000212511	protein_coding		8	1	70905990	413
ENSMUSG00000103685	TEC	Gm37074	ENSMUST00000193444	TEC		1	1	191249424	1843
ENSMUSG00000061838	protein_coding	Suclg2	ENSMUST00000204567	protein_coding		6	-1	95657468	385
ENSMUSG00000050134	protein_coding	Olfr430	ENSMUST00000214390	protein_coding	principal1	1	1	174066665	3300
ENSMUSG00000021832	protein_coding	Psmc6	ENSMUST00000227385	retained_intron		14	1	45334630	432
ENSMUSG00000061838	protein_coding	Suclg2	ENSMUST00000203109	retained_intron		6	-1	95718800	961
ENSMUSG00000003123	protein_coding	Lipe	ENSMUST00000206861	protein_coding	alternative2	7	-1	25389224	3171
ENSMUSG00000050134	protein_coding	Olfr430	ENSMUST00000213425	protein_coding	principal1	1	1	174066605	3873
ENSMUSG00000102899	antisense	Gm37850	ENSMUST00000194573	antisense		9	1	107762808	549
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000132139	protein_coding	alternative2	8	1	45507808	4644
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000162699	nonsense_mediated_decay		9	-1	45906861	2808
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000213083	retained_intron		8	1	70905993	4635
ENSMUSG00000116384	lincRNA	Gm35912	ENSMUST00000230786	lincRNA		16	1	3009196	2513
ENSMUSG00000003123	protein_coding	Lipe	ENSMUST00000149349	protein_coding	alternative2	7	-1	25398710	3713
ENSMUSG00000050134	protein_coding	Olfr430	ENSMUST00000055873	protein_coding	principal1	1	1	174069300	954
ENSMUSG00000037594	protein_coding	Clba1	ENSMUST00000037014	protein_coding	principal1	12	1	112808937	1960
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000212227	nonsense_mediated_decay		8	1	70905993	3323
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000160699	protein_coding		9	-1	45906911	2287
ENSMUSG00000103174	lincRNA	Gm37168	ENSMUST00000192965	lincRNA		1	1	191267178	1452
ENSMUSG00000021832	protein_coding	Psmc6	ENSMUST00000226739	retained_intron		14	1	45340454	680
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000141039	protein_coding		8	1	45507818	1699
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000212823	retained_intron		8	1	70906244	1911
ENSMUSG00000003123	protein_coding	Lipe	ENSMUST00000205923	nonsense_mediated_decay		7	-1	25384926	853
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000213001	protein_coding	alternative2	8	1	70906262	719
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000100407	retained_intron		9	-1	45869489	437
ENSMUSG00000105147	processed_pseudogene	Ckb-ps1	ENSMUST00000199192	processed_pseudogene		17	-1	53942105	1127
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000197438	nonsense_mediated_decay		3	-1	153912311	1992
ENSMUSG00000106398	lincRNA	Gm43357	ENSMUST00000197132	lincRNA		3	-1	136946544	342
ENSMUSG00000003123	protein_coding	Lipe	ENSMUST00000206588	retained_intron		7	-1	25383808	510
ENSMUSG00000105327	processed_pseudogene	Gm9409	ENSMUST00000197017	processed_pseudogene		3	1	136948605	316
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000213659	nonsense_mediated_decay		9	-1	45906387	829
ENSMUSG00000037594	protein_coding	Clba1	ENSMUST00000177808	protein_coding	principal1	12	1	112808975	1207
ENSMUSG00000019261	protein_coding	Map1s	ENSMUST00000212143	retained_intron		8	1	70911818	4396
ENSMUSG00000003123	protein_coding	Lipe	ENSMUST00000205698	protein_coding		7	-1	25390477	359
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000160868	retained_intron		9	-1	45872261	445
ENSMUSG00000104617	lincRNA	Gm43356	ENSMUST00000196582	lincRNA		3	-1	136955093	609
ENSMUSG00000003123	protein_coding	Lipe	ENSMUST00000105177	protein_coding		7	-1	25398709	1251
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000160469	retained_intron		9	-1	45898435	580
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000197833	nonsense_mediated_decay		3	-1	119783234	1598
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000160811	nonsense_mediated_decay		9	-1	45906503	635
ENSMUSG00000035181	protein_coding	Heatr5a	ENSMUST00000040583	protein_coding	principal2	12	-1	51971321	7763
ENSMUSG00000104610	lincRNA	Gm567	ENSMUST00000197127	lincRNA		3	1	137289639	469
ENSMUSG00000053714	antisense	4732471J01Rik	ENSMUST00000206436	antisense		7	1	25376819	2430
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000160325	retained_intron		9	-1	45900119	667
ENSMUSG00000054510	lincRNA	Gm14461	ENSMUST00000067618	lincRNA		2	1	78237547	1780
ENSMUSG00000054510	lincRNA	Gm14461	ENSMUST00000166653	lincRNA		2	1	78301692	309
ENSMUSG00000042790	protein_coding	Rnf214	ENSMUST00000215005	processed_transcript		9	-1	45906391	674
ENSMUSG00000053714	antisense	4732471J01Rik	ENSMUST00000205787	antisense		7	1	25376823	991
ENSMUSG00000053714	antisense	4732471J01Rik	ENSMUST00000206300	antisense		7	1	25395414	1887
ENSMUSG00000053714	antisense	4732471J01Rik	ENSMUST00000066316	antisense		7	1	25384805	438
ENSMUSG00000034430	protein_coding	Zxdc	ENSMUST00000075117	protein_coding	principal3	6	1	90369494	4126
ENSMUSG00000034731	protein_coding	Dgkh	ENSMUST00000226342	protein_coding	alternative2	14	-1	78732776	15257
ENSMUSG00000036932	protein_coding	Aifm1	ENSMUST00000114945	protein_coding	alternative1	X	-1	48513559	2221
ENSMUSG00000034430	protein_coding	Zxdc	ENSMUST00000045740	protein_coding	alternative2	6	1	90369608	1612
ENSMUSG00000035181	protein_coding	Heatr5a	ENSMUST00000220369	retained_intron		12	-1	51939950	4981
ENSMUSG00000085201	antisense	Nr6a1os	ENSMUST00000129089	antisense		2	1	38823257	645
ENSMUSG00000041523	protein_coding	Upk2	ENSMUST00000047740	protein_coding	principal1	9	-1	44454976	1083
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000197387	nonsense_mediated_decay		3	-1	119726140	576
ENSMUSG00000034430	protein_coding	Zxdc	ENSMUST00000203493	protein_coding		6	1	90369613	1035
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000000542	protein_coding	principal1	15	1	101128522	3640
ENSMUSG00000035181	protein_coding	Heatr5a	ENSMUST00000218847	retained_intron		12	-1	51888990	912
ENSMUSG00000085201	antisense	Nr6a1os	ENSMUST00000151229	antisense		2	1	38823341	525
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000196203	retained_intron		3	-1	119740879	937
ENSMUSG00000034430	protein_coding	Zxdc	ENSMUST00000137483	retained_intron		6	1	90369618	2961
ENSMUSG00000108124	TEC	Gm44146	ENSMUST00000203508	TEC		2	-1	38758686	816
ENSMUSG00000082508	processed_pseudogene	Rpl15-ps4	ENSMUST00000122372	processed_pseudogene		2	1	38777736	606
ENSMUSG00000035181	protein_coding	Heatr5a	ENSMUST00000217966	protein_coding	alternative2	12	-1	51918726	780
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000198733	retained_intron		3	-1	119724387	491
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000144229	protein_coding		15	1	101128537	332
ENSMUSG00000035181	protein_coding	Heatr5a	ENSMUST00000219641	retained_intron		12	-1	51922901	3657
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000195902	protein_coding		3	-1	119740510	465
ENSMUSG00000107468	TEC	5730507A11Rik	ENSMUST00000204297	TEC		2	1	38862163	3371
ENSMUSG00000035181	protein_coding	Heatr5a	ENSMUST00000218186	retained_intron		12	-1	51925437	2222
ENSMUSG00000049528	protein_coding	Olfr429	ENSMUST00000216346	protein_coding	principal1	1	1	174084331	2510
ENSMUSG00000024349	protein_coding	Sting1	ENSMUST00000235495	protein_coding		18	-1	35740462	2086
ENSMUSG00000034731	protein_coding	Dgkh	ENSMUST00000227537	nonsense_mediated_decay		14	-1	78644451	4073
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000196343	retained_intron		3	-1	119742768	4047
ENSMUSG00000107884	TEC	Gm44144	ENSMUST00000203683	TEC		2	-1	38854937	1960
ENSMUSG00000031010	protein_coding	Usp9x	ENSMUST00000169594	protein_coding		X	1	13071498	2772
ENSMUSG00000027893	protein_coding	Ahcyl1	ENSMUST00000138091	nonsense_mediated_decay		3	-1	107677767	3291
ENSMUSG00000036932	protein_coding	Aifm1	ENSMUST00000037349	protein_coding	principal3	X	-1	48513563	2237
ENSMUSG00000037499	protein_coding	Nenf	ENSMUST00000046770	protein_coding	principal1	1	-1	191318194	742
ENSMUSG00000049528	protein_coding	Olfr429	ENSMUST00000060693	protein_coding	principal1	1	1	174089038	943
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000197464	protein_coding		3	-1	119783286	1742
ENSMUSG00000036932	protein_coding	Aifm1	ENSMUST00000156795	processed_transcript		X	-1	48482896	1025
ENSMUSG00000030187	protein_coding	Klra2	ENSMUST00000032306	protein_coding	principal3	6	-1	131247362	1799
ENSMUSG00000034731	protein_coding	Dgkh	ENSMUST00000228362	protein_coding		14	-1	78629274	3308
ENSMUSG00000036932	protein_coding	Aifm1	ENSMUST00000124623	processed_transcript		X	-1	48486518	450
ENSMUSG00000105473	processed_pseudogene	Mark1-ps1	ENSMUST00000198516	processed_pseudogene		17	-1	53949065	717
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000198399	processed_transcript		3	-1	119784464	654
ENSMUSG00000035181	protein_coding	Heatr5a	ENSMUST00000218254	retained_intron		12	-1	51971297	4111
ENSMUSG00000106975	unprocessed_pseudogene	Olfr428-ps1	ENSMUST00000201135	unprocessed_pseudogene		1	1	174094967	466
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000199026	processed_transcript		3	-1	119784466	478
ENSMUSG00000035181	protein_coding	Heatr5a	ENSMUST00000219277	retained_intron		12	-1	51947304	5052
ENSMUSG00000111420	unprocessed_pseudogene	Olfr927-ps1	ENSMUST00000216759	unprocessed_pseudogene		9	-1	38893021	782
ENSMUSG00000034731	protein_coding	Dgkh	ENSMUST00000227767	protein_coding		14	-1	78629290	3319
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000130432	protein_coding		15	1	101128551	370
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000196066	processed_transcript		3	-1	119783691	454
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000198403	protein_coding		3	-1	119783307	389
ENSMUSG00000031010	protein_coding	Usp9x	ENSMUST00000139764	retained_intron		X	1	13071514	3019
ENSMUSG00000030187	protein_coding	Klra2	ENSMUST00000088867	protein_coding	alternative2	6	-1	131247362	1132
ENSMUSG00000028134	protein_coding	Ptbp2	ENSMUST00000029780	protein_coding	principal3	3	-1	119783388	3364
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000120028	protein_coding	principal1	15	1	101128551	1932
ENSMUSG00000034731	protein_coding	Dgkh	ENSMUST00000227820	processed_transcript		14	-1	78651744	2493
ENSMUSG00000106075	processed_pseudogene	Gm42804	ENSMUST00000199701	processed_pseudogene		3	1	119757338	178
ENSMUSG00000022270	protein_coding	Retreg1	ENSMUST00000022881	protein_coding		15	1	25843180	3248
ENSMUSG00000030049	protein_coding	Gkn2	ENSMUST00000032128	protein_coding	principal1	6	1	87373357	788
ENSMUSG00000034731	protein_coding	Dgkh	ENSMUST00000074729	protein_coding	principal2	14	-1	78725089	3967
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000117984	protein_coding	principal1	15	1	101128574	1852
ENSMUSG00000115107	processed_pseudogene	Gm18368	ENSMUST00000228480	processed_pseudogene		14	1	78703810	754
ENSMUSG00000032078	protein_coding	Zpr1	ENSMUST00000156440	protein_coding	principal1	9	1	46273064	2984
ENSMUSG00000104925	sense_intronic	Gm43061	ENSMUST00000198850	sense_intronic		3	1	103332143	2241
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000119063	protein_coding	principal1	15	1	101128922	1818
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000121718	protein_coding	principal1	15	1	101128924	1906
ENSMUSG00000022270	protein_coding	Retreg1	ENSMUST00000228600	protein_coding		15	1	25910424	361
ENSMUSG00000082602	processed_pseudogene	Gm15021	ENSMUST00000117832	processed_pseudogene		X	1	135615994	742
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000124151	protein_coding		15	1	101133415	312
ENSMUSG00000022270	protein_coding	Retreg1	ENSMUST00000228327	protein_coding		15	1	25933552	579
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000120754	protein_coding	principal1	15	1	101134133	3506
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000128868	retained_intron		15	1	101135657	453
ENSMUSG00000022270	protein_coding	Retreg1	ENSMUST00000227275	protein_coding	principal1	15	1	25940702	3200
ENSMUSG00000046532	protein_coding	Ar	ENSMUST00000052837	protein_coding	principal1	X	1	98148769	10048
ENSMUSG00000022270	protein_coding	Retreg1	ENSMUST00000226750	protein_coding		15	1	25940773	484
ENSMUSG00000000530	protein_coding	Acvrl1	ENSMUST00000128525	processed_transcript		15	1	101137600	537
ENSMUSG00000022270	protein_coding	Retreg1	ENSMUST00000226438	protein_coding		15	1	25940826	2783
ENSMUSG00000101464	processed_pseudogene	Gm7436	ENSMUST00000187229	processed_pseudogene		9	-1	105545827	391
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000172641	retained_intron		11	1	80428615	2975
ENSMUSG00000082933	processed_pseudogene	Gm14811	ENSMUST00000117070	processed_pseudogene		X	1	98483790	117
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000058210	protein_coding	principal1	6	-1	137649285	4567
ENSMUSG00000031411	protein_coding	Prame	ENSMUST00000113159	protein_coding	principal1	X	-1	135627705	2268
ENSMUSG00000101597	processed_pseudogene	Gm5621	ENSMUST00000187303	processed_pseudogene		9	-1	105560761	640
ENSMUSG00000081397	processed_pseudogene	Gm14815	ENSMUST00000120060	processed_pseudogene		X	-1	98514387	488
ENSMUSG00000031411	protein_coding	Prame	ENSMUST00000033786	protein_coding	principal1	X	-1	135615805	1395
ENSMUSG00000027893	protein_coding	Ahcyl1	ENSMUST00000029490	protein_coding	principal1	3	-1	107696560	3863
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000100841	protein_coding	principal1	6	-1	137571017	4151
ENSMUSG00000022270	protein_coding	Retreg1	ENSMUST00000110438	protein_coding	principal1	15	1	25940887	1526
ENSMUSG00000028680	protein_coding	Plk3	ENSMUST00000076859	protein_coding	principal1	4	-1	117133963	2378
ENSMUSG00000022722	protein_coding	Arl6	ENSMUST00000023405	protein_coding	principal1	16	-1	59639167	1696
ENSMUSG00000024601	protein_coding	Isoc1	ENSMUST00000025503	protein_coding	principal1	18	1	58659466	3377
ENSMUSG00000022270	protein_coding	Retreg1	ENSMUST00000228306	protein_coding		15	1	25942679	1430
ENSMUSG00000027893	protein_coding	Ahcyl1	ENSMUST00000153530	processed_transcript		3	-1	107665596	737
ENSMUSG00000028680	protein_coding	Plk3	ENSMUST00000147730	protein_coding		4	-1	117133799	2161
ENSMUSG00000024349	protein_coding	Sting1	ENSMUST00000237919	protein_coding	principal1	18	-1	35740479	2134
ENSMUSG00000027893	protein_coding	Ahcyl1	ENSMUST00000144864	retained_intron		3	-1	107670574	1689
ENSMUSG00000024601	protein_coding	Isoc1	ENSMUST00000238139	protein_coding		18	1	58659480	1059
ENSMUSG00000022722	protein_coding	Arl6	ENSMUST00000099646	protein_coding		16	-1	59639391	1554
ENSMUSG00000027893	protein_coding	Ahcyl1	ENSMUST00000137583	retained_intron		3	-1	107667483	587
ENSMUSG00000118337	lincRNA	Gm50227	ENSMUST00000235435	lincRNA		18	1	58778425	2504
ENSMUSG00000027893	protein_coding	Ahcyl1	ENSMUST00000151935	retained_intron		3	-1	107669509	583
ENSMUSG00000024349	protein_coding	Sting1	ENSMUST00000115728	protein_coding	principal1	18	-1	35740554	2299
ENSMUSG00000111924	lincRNA	4930556N09Rik	ENSMUST00000219466	lincRNA		10	1	97035768	1015
ENSMUSG00000022722	protein_coding	Arl6	ENSMUST00000118438	protein_coding		16	-1	59632520	875
ENSMUSG00000111924	lincRNA	4930556N09Rik	ENSMUST00000219048	lincRNA		10	1	97035780	881
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000188134	nonsense_mediated_decay		4	-1	148626762	1773
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000188380	processed_transcript		4	-1	148616138	731
ENSMUSG00000112631	processed_pseudogene	Gm48555	ENSMUST00000219874	processed_pseudogene		10	-1	97106584	395
ENSMUSG00000022722	protein_coding	Arl6	ENSMUST00000149797	protein_coding		16	-1	59639129	811
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000111878	protein_coding	principal1	6	-1	137649285	3560
ENSMUSG00000027893	protein_coding	Ahcyl1	ENSMUST00000153623	protein_coding		3	-1	107695963	831
ENSMUSG00000108722	lincRNA	Gm34225	ENSMUST00000205469	lincRNA		7	1	115031937	443
ENSMUSG00000024349	protein_coding	Sting1	ENSMUST00000235496	retained_intron		18	-1	35738908	1320
ENSMUSG00000108722	lincRNA	Gm34225	ENSMUST00000206921	lincRNA		7	1	115064993	572
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000188488	protein_coding		4	-1	148618771	529
ENSMUSG00000047671	protein_coding	Tctex1d4	ENSMUST00000134074	protein_coding		4	1	117126794	500
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000147526	protein_coding		6	-1	137648283	2019
ENSMUSG00000024349	protein_coding	Sting1	ENSMUST00000237853	nonsense_mediated_decay		18	-1	35739942	1025
ENSMUSG00000032078	protein_coding	Zpr1	ENSMUST00000125239	nonsense_mediated_decay		9	1	46273193	602
ENSMUSG00000108722	lincRNA	Gm34225	ENSMUST00000205978	lincRNA		7	1	115066520	305
ENSMUSG00000027893	protein_coding	Ahcyl1	ENSMUST00000138116	retained_intron		3	-1	107696505	2580
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000001900	protein_coding	principal1	5	-1	143329256	1364
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000127179	processed_transcript		6	-1	137519760	370
ENSMUSG00000112892	processed_pseudogene	Gm8613	ENSMUST00000220383	processed_pseudogene		10	-1	97200370	1077
ENSMUSG00000032078	protein_coding	Zpr1	ENSMUST00000114552	protein_coding		9	1	46273208	1471
ENSMUSG00000085436	antisense	Zfp335os	ENSMUST00000129364	antisense		2	1	164911354	1127
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000132920	protein_coding		6	-1	137654876	1121
ENSMUSG00000111981	processed_pseudogene	Gm18515	ENSMUST00000219755	processed_pseudogene		10	1	97241912	797
ENSMUSG00000032078	protein_coding	Zpr1	ENSMUST00000141763	retained_intron		9	1	46273632	754
ENSMUSG00000085436	antisense	Zfp335os	ENSMUST00000142338	antisense		2	1	164914090	482
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000152046	retained_intron		6	-1	137519703	364
ENSMUSG00000076916	TR_J_gene	Traj13	ENSMUST00000103728	TR_J_gene	principal1	14	1	54205741	57
ENSMUSG00000024349	protein_coding	Sting1	ENSMUST00000235218	protein_coding		18	-1	35735928	334
ENSMUSG00000032078	protein_coding	Zpr1	ENSMUST00000125791	retained_intron		9	1	46275457	643
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000159813	nonsense_mediated_decay		5	-1	143329220	1341
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000146442	protein_coding		6	-1	137589026	622
ENSMUSG00000032078	protein_coding	Zpr1	ENSMUST00000143511	retained_intron		9	1	46276134	263
ENSMUSG00000108401	processed_pseudogene	Rpl19-ps10	ENSMUST00000205555	processed_pseudogene		7	1	115172056	330
ENSMUSG00000102211	TEC	Gm37490	ENSMUST00000195566	TEC		1	1	176889507	724
ENSMUSG00000110823	lincRNA	Gm36799	ENSMUST00000214113	lincRNA		9	1	43356273	1737
ENSMUSG00000047671	protein_coding	Tctex1d4	ENSMUST00000062206	protein_coding	principal1	4	1	117126813	990
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000161915	protein_coding	principal1	5	-1	143326354	1216
ENSMUSG00000110823	lincRNA	Gm36799	ENSMUST00000215783	lincRNA		9	1	43359163	1634
ENSMUSG00000024349	protein_coding	Sting1	ENSMUST00000236926	retained_intron		18	-1	35739467	776
ENSMUSG00000117078	processed_pseudogene	Gm4561	ENSMUST00000232868	processed_pseudogene		17	-1	69925831	505
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000153933	processed_transcript		6	-1	137649229	533
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000203515	retained_intron		6	-1	137538089	3337
ENSMUSG00000047671	protein_coding	Tctex1d4	ENSMUST00000144269	protein_coding		4	1	117127174	713
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000139753	protein_coding		6	-1	137648283	460
ENSMUSG00000110823	lincRNA	Gm36799	ENSMUST00000216190	lincRNA		9	1	43376625	2178
ENSMUSG00000039849	protein_coding	Pcif1	ENSMUST00000145327	retained_intron		2	1	164879304	611
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000134630	protein_coding		6	-1	137649242	367
ENSMUSG00000082499	processed_pseudogene	Gm13615	ENSMUST00000120242	processed_pseudogene		2	-1	55972994	1612
ENSMUSG00000024349	protein_coding	Sting1	ENSMUST00000235302	protein_coding		18	-1	35740205	657
ENSMUSG00000002014	protein_coding	Ssr4	ENSMUST00000002090	protein_coding	principal3	X	1	73787062	765
ENSMUSG00000015766	protein_coding	Eps8	ENSMUST00000205037	retained_intron		6	-1	137570759	3620
ENSMUSG00000110719	unitary_pseudogene	Gm2716	ENSMUST00000212350	unitary_pseudogene		8	-1	88070810	643
ENSMUSG00000000409	protein_coding	Lck	ENSMUST00000067240	protein_coding	principal1	4	-1	129558391	2185
ENSMUSG00000024349	protein_coding	Sting1	ENSMUST00000235173	retained_intron		18	-1	35740016	428
ENSMUSG00000076917	TR_J_gene	Traj12	ENSMUST00000103729	TR_J_gene	principal1	14	1	54206553	58
ENSMUSG00000107878	TEC	Gm44106	ENSMUST00000203153	TEC		6	-1	137593575	1599
ENSMUSG00000038900	protein_coding	Rpl12	ENSMUST00000126610	protein_coding	principal1	2	1	32961559	1242
ENSMUSG00000111829	lincRNA	Gm47475	ENSMUST00000216533	lincRNA		9	-1	43444438	2718
ENSMUSG00000002014	protein_coding	Ssr4	ENSMUST00000136544	retained_intron		X	1	73787182	383
ENSMUSG00000024349	protein_coding	Sting1	ENSMUST00000237405	protein_coding		18	-1	35740489	342
ENSMUSG00000055371	protein_coding	Stam2	ENSMUST00000102759	protein_coding	principal1	2	-1	52742200	4717
ENSMUSG00000058252	protein_coding	Tcp11x2	ENSMUST00000078605	protein_coding	principal1	X	-1	135693790	1776
ENSMUSG00000112861	processed_pseudogene	Gm47930	ENSMUST00000219770	processed_pseudogene		10	1	25883673	885
ENSMUSG00000038994	protein_coding	Hils1	ENSMUST00000038928	protein_coding	principal1	11	1	94967593	864
ENSMUSG00000076918	TR_J_gene	Traj11	ENSMUST00000103730	TR_J_gene	principal1	14	1	54207139	59
ENSMUSG00000002014	protein_coding	Ssr4	ENSMUST00000155552	retained_intron		X	1	73787184	619
ENSMUSG00000038900	protein_coding	Rpl12	ENSMUST00000134912	retained_intron		2	1	32961720	2863
ENSMUSG00000055371	protein_coding	Stam2	ENSMUST00000127316	protein_coding		2	-1	52742281	1928
ENSMUSG00000100836	lincRNA	Gm28215	ENSMUST00000186146	lincRNA		9	1	43469422	346
ENSMUSG00000002014	protein_coding	Ssr4	ENSMUST00000141721	retained_intron		X	1	73787184	2568
ENSMUSG00000000409	protein_coding	Lck	ENSMUST00000102596	protein_coding	principal1	4	-1	129573641	2111
ENSMUSG00000038900	protein_coding	Rpl12	ENSMUST00000154340	retained_intron		2	1	32961729	1417
ENSMUSG00000055540	protein_coding	Epha6	ENSMUST00000068860	protein_coding	principal1	16	-1	60605248	3930
ENSMUSG00000076919	TR_J_gene	Traj9	ENSMUST00000103731	TR_J_gene	principal1	14	1	54209393	58
ENSMUSG00000038900	protein_coding	Rpl12	ENSMUST00000133842	retained_intron		2	1	32961732	756
ENSMUSG00000002014	protein_coding	Ssr4	ENSMUST00000130738	retained_intron		X	1	73787224	2119
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000162287	processed_transcript		5	-1	143329211	912
ENSMUSG00000038900	protein_coding	Rpl12	ENSMUST00000125415	retained_intron		2	1	32961740	600
ENSMUSG00000111110	lincRNA	Gm36855	ENSMUST00000216660	lincRNA		9	-1	43515832	1406
ENSMUSG00000000409	protein_coding	Lck	ENSMUST00000132030	retained_intron		4	-1	129555848	779
ENSMUSG00000026504	protein_coding	Sdccag8	ENSMUST00000150429	retained_intron		1	1	176814660	1398
ENSMUSG00000002014	protein_coding	Ssr4	ENSMUST00000142829	retained_intron		X	1	73787265	522
ENSMUSG00000111110	lincRNA	Gm36855	ENSMUST00000215241	lincRNA		9	-1	43517252	1844
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000159941	protein_coding		5	-1	143329223	848
ENSMUSG00000000409	protein_coding	Lck	ENSMUST00000127943	retained_intron		4	-1	129556231	608
ENSMUSG00000002014	protein_coding	Ssr4	ENSMUST00000129239	retained_intron		X	1	73788844	747
ENSMUSG00000111110	lincRNA	Gm36855	ENSMUST00000216439	lincRNA		9	-1	43521004	754
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000162941	protein_coding		5	-1	143329214	1254
ENSMUSG00000000409	protein_coding	Lck	ENSMUST00000123640	retained_intron		4	-1	129556459	568
ENSMUSG00000038900	protein_coding	Rpl12	ENSMUST00000102811	nonsense_mediated_decay		2	1	32961740	729
ENSMUSG00000055371	protein_coding	Stam2	ENSMUST00000150582	retained_intron		2	-1	52742180	1078
ENSMUSG00000076920	TR_J_pseudogene	Traj8	ENSMUST00000103732	TR_J_pseudogene		14	1	54209918	37
ENSMUSG00000000409	protein_coding	Lck	ENSMUST00000139957	retained_intron		4	-1	129558087	450
ENSMUSG00000038900	protein_coding	Rpl12	ENSMUST00000144644	retained_intron		2	1	32962266	489
ENSMUSG00000055371	protein_coding	Stam2	ENSMUST00000155516	nonsense_mediated_decay		2	-1	52742190	995
ENSMUSG00000000532	protein_coding	Acvr1b	ENSMUST00000000544	protein_coding	principal1	15	1	101174067	4418
ENSMUSG00000000409	protein_coding	Lck	ENSMUST00000134336	protein_coding		4	-1	129558372	368
ENSMUSG00000055540	protein_coding	Epha6	ENSMUST00000161358	processed_transcript		16	-1	60005721	1356
ENSMUSG00000076921	TR_J_gene	Traj7	ENSMUST00000103733	TR_J_gene	principal1	14	1	54211470	59
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000186729	nonsense_mediated_decay		4	-1	148619276	676
ENSMUSG00000055371	protein_coding	Stam2	ENSMUST00000138290	protein_coding		2	-1	52742156	657
ENSMUSG00000000409	protein_coding	Lck	ENSMUST00000167288	protein_coding		4	-1	129558372	2074
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000236853	protein_coding	principal4	17	-1	31637199	6226
ENSMUSG00000055540	protein_coding	Epha6	ENSMUST00000159383	retained_intron		16	-1	60605531	1856
ENSMUSG00000002014	protein_coding	Ssr4	ENSMUST00000166518	protein_coding	alternative2	X	1	73787028	800
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000112877	protein_coding		2	-1	38927688	6334
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000189041	processed_transcript		4	-1	148618075	908
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000162358	protein_coding		5	-1	143329229	703
ENSMUSG00000055540	protein_coding	Epha6	ENSMUST00000162129	processed_transcript		16	-1	60605219	735
ENSMUSG00000110988	lincRNA	Gm29909	ENSMUST00000215154	lincRNA		9	1	43608184	519
ENSMUSG00000110988	lincRNA	Gm29909	ENSMUST00000214500	lincRNA		9	1	43608184	922
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000187937	processed_transcript		4	-1	148616980	629
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000123342	processed_transcript		2	-1	38740464	642
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000186317	processed_transcript		4	-1	148617852	358
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000161333	processed_transcript		5	-1	143329229	793
ENSMUSG00000094437	processed_pseudogene	Gm9830	ENSMUST00000178509	processed_pseudogene		9	1	44464243	357
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000128688	processed_transcript		2	-1	38742957	794
ENSMUSG00000089685	antisense	Gm9017	ENSMUST00000160040	antisense		16	1	60604766	484
ENSMUSG00000076922	TR_J_gene	Traj6	ENSMUST00000103734	TR_J_gene	principal1	14	1	54212688	62
ENSMUSG00000023830	protein_coding	Igf2r	ENSMUST00000024599	protein_coding	principal1	17	-1	12769664	8887
ENSMUSG00000089685	antisense	Gm9017	ENSMUST00000159613	antisense		16	1	60605755	676
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000142113	protein_coding		2	-1	38784520	817
ENSMUSG00000111400	lincRNA	Gm29961	ENSMUST00000215431	lincRNA		9	-1	43645157	637
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000045180	nonsense_mediated_decay		4	-1	148626765	2006
ENSMUSG00000111400	lincRNA	Gm29961	ENSMUST00000214692	lincRNA		9	-1	43644078	644
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000162066	protein_coding		5	-1	143329228	820
ENSMUSG00000018476	protein_coding	Kdm6b	ENSMUST00000094077	protein_coding	principal1	11	-1	69413675	6654
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000159718	retained_intron		5	-1	143328569	930
ENSMUSG00000106623	TEC	Gm43335	ENSMUST00000198299	TEC		5	1	113860161	3276
ENSMUSG00000116894	processed_transcript	4930547E14Rik	ENSMUST00000232158	antisense		16	1	59636945	549
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000067801	protein_coding	principal4	17	-1	31637238	2533
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000162284	processed_transcript		5	-1	143329189	435
ENSMUSG00000076923	TR_J_gene	Traj5	ENSMUST00000103735	TR_J_gene	principal1	14	1	54213777	62
ENSMUSG00000116894	processed_transcript	4930547E14Rik	ENSMUST00000232302	lincRNA		16	1	59639209	599
ENSMUSG00000023830	protein_coding	Igf2r	ENSMUST00000161738	processed_transcript		17	-1	12701279	803
ENSMUSG00000105071	TEC	Gm43336	ENSMUST00000200487	TEC		5	-1	113904898	4504
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000160061	processed_transcript		5	-1	143329192	442
ENSMUSG00000103905	processed_pseudogene	Gm34379	ENSMUST00000195036	processed_pseudogene		3	1	63905429	290
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000118504	protein_coding	alternative2	17	-1	31637238	2474
ENSMUSG00000110808	processed_pseudogene	Gm5364	ENSMUST00000216789	processed_pseudogene		9	1	43683053	889
ENSMUSG00000018476	protein_coding	Kdm6b	ENSMUST00000156562	processed_transcript		11	-1	69404215	743
ENSMUSG00000001844	protein_coding	Zdhhc4	ENSMUST00000161199	processed_transcript		5	-1	143329202	801
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000132636	processed_transcript		2	-1	38785111	675
ENSMUSG00000023830	protein_coding	Igf2r	ENSMUST00000159127	processed_transcript		17	-1	12750800	245
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000142130	protein_coding		2	-1	38926275	719
ENSMUSG00000085178	antisense	Kdm6bos	ENSMUST00000129924	antisense		11	1	69401513	840
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000147391	nonsense_mediated_decay		4	-1	148618367	1011
ENSMUSG00000117304	processed_pseudogene	Gm49861	ENSMUST00000233697	processed_pseudogene		17	1	28520008	243
ENSMUSG00000076924	TR_J_gene	Traj4	ENSMUST00000103736	TR_J_gene	principal1	14	1	54216291	63
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000156301	processed_transcript		2	-1	38784469	897
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000203202	retained_intron		2	-1	38763765	3640
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000078509	protein_coding	alternative2	17	-1	31637165	2403
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000123099	processed_transcript		2	-1	38784469	238
ENSMUSG00000089711	antisense	Gm16240	ENSMUST00000161924	antisense		10	1	76293165	614
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000190552	nonsense_mediated_decay		4	-1	148621990	741
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000235180	retained_intron		17	-1	31622882	1826
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000151597	retained_intron		17	-1	31617873	1461
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000171337	protein_coding	principal4	8	1	45507918	5651
ENSMUSG00000057021	protein_coding	Vmn2r-ps159	ENSMUST00000189559	nonsense_mediated_decay		4	1	156331103	2560
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000140897	nonsense_mediated_decay		4	-1	148620690	781
ENSMUSG00000000531	protein_coding	Grasp	ENSMUST00000000543	protein_coding	principal1	15	1	101224188	2033
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000168098	protein_coding	principal1	2	-1	38784515	5877
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000128351	protein_coding		17	-1	31627491	757
ENSMUSG00000063972	protein_coding	Nr6a1	ENSMUST00000076275	protein_coding		2	-1	38926217	5941
ENSMUSG00000021182	protein_coding	Ccdc88c	ENSMUST00000068411	protein_coding	principal2	12	-1	101029056	7542
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000191378	nonsense_mediated_decay		4	-1	148620685	684
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000143982	processed_transcript		17	-1	31623058	230
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000155814	protein_coding		17	-1	31636790	839
ENSMUSG00000116247	unprocessed_pseudogene	Vmn1r-ps137	ENSMUST00000231185	unprocessed_pseudogene		16	1	3088680	799
ENSMUSG00000033208	protein_coding	S100b	ENSMUST00000036387	protein_coding	principal1	10	1	76253853	1484
ENSMUSG00000070034	protein_coding	Sp110	ENSMUST00000128339	retained_intron		1	-1	85589191	2310
ENSMUSG00000116441	processed_pseudogene	Gm49554	ENSMUST00000229902	processed_pseudogene		16	-1	3108585	235
ENSMUSG00000031010	protein_coding	Usp9x	ENSMUST00000089302	protein_coding	principal1	X	1	13071514	11887
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000151718	protein_coding		17	-1	31636640	876
ENSMUSG00000097915	antisense	A330009N23Rik	ENSMUST00000180639	antisense		15	-1	101224121	1393
ENSMUSG00000116246	processed_pseudogene	Gm4106	ENSMUST00000228975	processed_pseudogene		16	-1	3162048	823
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000191450	nonsense_mediated_decay		4	-1	148626758	1304
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000135425	protein_coding		17	-1	31636649	866
ENSMUSG00000057021	protein_coding	Vmn2r-ps159	ENSMUST00000074107	protein_coding		4	1	156331103	2716
ENSMUSG00000116150	processed_pseudogene	Gm3711	ENSMUST00000229852	processed_pseudogene		16	-1	3165024	580
ENSMUSG00000020231	protein_coding	Dip2a	ENSMUST00000162524	nonsense_mediated_decay		10	-1	76265508	650
ENSMUSG00000097915	antisense	A330009N23Rik	ENSMUST00000229610	antisense		15	-1	101225186	1008
ENSMUSG00000024039	protein_coding	Cbs	ENSMUST00000236909	protein_coding		17	-1	31633164	363
ENSMUSG00000031010	protein_coding	Usp9x	ENSMUST00000149021	protein_coding		X	1	13113684	523
ENSMUSG00000026796	protein_coding	Fam129b	ENSMUST00000028135	protein_coding	principal1	2	1	32876114	3714
ENSMUSG00000116388	processed_pseudogene	Gm3749	ENSMUST00000229309	processed_pseudogene		16	1	3301413	580
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000067107	protein_coding	alternative2	8	1	45507918	5597
ENSMUSG00000097915	antisense	A330009N23Rik	ENSMUST00000229239	antisense		15	-1	101224777	484
ENSMUSG00000035382	protein_coding	Pcsk7	ENSMUST00000039059	protein_coding	principal1	9	1	45906497	3876
ENSMUSG00000021440	protein_coding	Cts7	ENSMUST00000224773	nonsense_mediated_decay		13	-1	61358183	1589
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000190287	nonsense_mediated_decay		4	-1	148619350	517
ENSMUSG00000031010	protein_coding	Usp9x	ENSMUST00000174762	retained_intron		X	1	13129060	820
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000145458	protein_coding		8	1	45627739	979
ENSMUSG00000026796	protein_coding	Fam129b	ENSMUST00000138781	protein_coding		2	1	32895632	337
ENSMUSG00000057021	protein_coding	Vmn2r-ps159	ENSMUST00000096792	protein_coding	principal1	4	1	156331135	3036
ENSMUSG00000035382	protein_coding	Pcsk7	ENSMUST00000215535	retained_intron		9	1	45906540	935
ENSMUSG00000115944	lincRNA	AU021063	ENSMUST00000229162	lincRNA		15	1	101221247	583
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000134321	protein_coding		8	1	45627745	859
ENSMUSG00000026796	protein_coding	Fam129b	ENSMUST00000125347	retained_intron		2	1	32910908	707
ENSMUSG00000102982	TEC	Gm38319	ENSMUST00000194537	TEC		1	-1	13642748	1266
ENSMUSG00000031010	protein_coding	Usp9x	ENSMUST00000124097	retained_intron		X	1	13129327	2864
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000135336	protein_coding	alternative2	8	1	45627803	6307
ENSMUSG00000116964	antisense	Gm46555	ENSMUST00000231968	antisense		16	1	92457477	664
ENSMUSG00000026796	protein_coding	Fam129b	ENSMUST00000154514	processed_transcript		2	1	32914711	664
ENSMUSG00000031010	protein_coding	Usp9x	ENSMUST00000133997	protein_coding		X	1	13160857	1452
ENSMUSG00000026796	protein_coding	Fam129b	ENSMUST00000150875	processed_transcript		2	1	32918641	658
ENSMUSG00000115617	lincRNA	Gm48975	ENSMUST00000226648	lincRNA		14	1	47422417	1392
ENSMUSG00000113020	TEC	Gm48063	ENSMUST00000222872	TEC		12	-1	98813199	2517
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000127395	processed_transcript		8	1	45628185	1287
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000156431	nonsense_mediated_decay		14	-1	31640944	2906
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000130850	protein_coding		8	1	45628201	422
ENSMUSG00000035382	protein_coding	Pcsk7	ENSMUST00000215189	nonsense_mediated_decay		9	1	45906569	3893
ENSMUSG00000026796	protein_coding	Fam129b	ENSMUST00000151607	processed_transcript		2	1	32921642	876
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000105699	protein_coding		4	-1	148626758	1904
ENSMUSG00000066170	lincRNA	E230001N04Rik	ENSMUST00000181029	lincRNA		17	1	28522720	2679
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000153798	protein_coding		8	1	45658292	2667
ENSMUSG00000066170	lincRNA	E230001N04Rik	ENSMUST00000095448	lincRNA		17	1	28523293	2055
ENSMUSG00000035382	protein_coding	Pcsk7	ENSMUST00000216672	protein_coding	principal1	9	1	45906985	3599
ENSMUSG00000001508	protein_coding	Sgca	ENSMUST00000103162	protein_coding	principal1	11	-1	94976327	1724
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000210946	protein_coding		8	1	45658354	460
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000187939	protein_coding		4	-1	148620612	570
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000113779	protein_coding	principal3	X	1	99975606	4955
ENSMUSG00000030603	protein_coding	Psmc4	ENSMUST00000032824	protein_coding	principal1	7	-1	28050101	1440
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000134675	protein_coding		8	1	45658670	1692
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000186711	protein_coding		4	-1	148618680	814
ENSMUSG00000001508	protein_coding	Sgca	ENSMUST00000139855	protein_coding		11	-1	94970676	610
ENSMUSG00000089828	processed_pseudogene	Gm16300	ENSMUST00000160031	processed_pseudogene		15	-1	47703827	1279
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000022437	protein_coding	principal1	14	-1	31640964	2644
ENSMUSG00000035382	protein_coding	Pcsk7	ENSMUST00000213854	nonsense_mediated_decay		9	1	45910426	547
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000190630	protein_coding		4	-1	148619286	748
ENSMUSG00000097714	lincRNA	Gm20109	ENSMUST00000180802	lincRNA		17	-1	28523148	671
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000139869	protein_coding	alternative2	8	1	45658676	4275
ENSMUSG00000021189	protein_coding	Atxn3	ENSMUST00000021606	protein_coding	principal3	12	-1	101958246	5363
ENSMUSG00000001508	protein_coding	Sgca	ENSMUST00000152042	protein_coding		11	-1	94973489	351
ENSMUSG00000021182	protein_coding	Ccdc88c	ENSMUST00000222204	retained_intron		12	-1	100922887	2633
ENSMUSG00000035576	protein_coding	L3mbtl1	ENSMUST00000035751	protein_coding	principal1	2	1	162943474	2724
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000140078	protein_coding		14	-1	31614311	503
ENSMUSG00000096042	unprocessed_pseudogene	Vmn2r125	ENSMUST00000096794	unprocessed_pseudogene		4	1	156344200	2717
ENSMUSG00000001508	protein_coding	Sgca	ENSMUST00000100551	protein_coding	principal1	11	-1	94973463	1465
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000139501	retained_intron		14	-1	31610334	308
ENSMUSG00000021182	protein_coding	Ccdc88c	ENSMUST00000223509	processed_transcript		12	-1	100922614	492
ENSMUSG00000035382	protein_coding	Pcsk7	ENSMUST00000216614	processed_transcript		9	1	45918593	442
ENSMUSG00000035576	protein_coding	L3mbtl1	ENSMUST00000149447	processed_transcript		2	1	162943500	409
ENSMUSG00000021189	protein_coding	Atxn3	ENSMUST00000160186	nonsense_mediated_decay		12	-1	101934355	439
ENSMUSG00000021182	protein_coding	Ccdc88c	ENSMUST00000233416	protein_coding		12	-1	100929065	867
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000113776	protein_coding		X	1	99975606	5105
ENSMUSG00000021182	protein_coding	Ccdc88c	ENSMUST00000223235	protein_coding		12	-1	100945173	705
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000164980	nonsense_mediated_decay		5	-1	113908705	3136
ENSMUSG00000035382	protein_coding	Pcsk7	ENSMUST00000216504	processed_transcript		9	1	45918891	229
ENSMUSG00000001508	protein_coding	Sgca	ENSMUST00000166320	protein_coding	principal1	11	-1	94976327	1428
ENSMUSG00000030603	protein_coding	Psmc4	ENSMUST00000138512	retained_intron		7	-1	28047022	854
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000113775	protein_coding		X	1	99975606	5088
ENSMUSG00000035382	protein_coding	Pcsk7	ENSMUST00000216514	retained_intron		9	1	45919369	608
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000133864	retained_intron		8	1	45658696	543
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000189048	protein_coding		4	-1	148625362	1096
ENSMUSG00000021182	protein_coding	Ccdc88c	ENSMUST00000223416	processed_transcript		12	-1	100982357	950
ENSMUSG00000039849	protein_coding	Pcif1	ENSMUST00000041643	protein_coding	principal1	2	1	164879357	5780
ENSMUSG00000035382	protein_coding	Pcsk7	ENSMUST00000214425	retained_intron		9	1	45926413	749
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000167066	protein_coding		14	-1	31640878	1566
ENSMUSG00000021182	protein_coding	Ccdc88c	ENSMUST00000223097	protein_coding		12	-1	101028909	1253
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000105700	protein_coding		4	-1	148625362	923
ENSMUSG00000021189	protein_coding	Atxn3	ENSMUST00000160251	protein_coding		12	-1	101958243	998
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000165955	nonsense_mediated_decay		14	-1	31640878	1500
ENSMUSG00000008429	protein_coding	Herpud2	ENSMUST00000008573	protein_coding	principal1	9	-1	25151820	2781
ENSMUSG00000039849	protein_coding	Pcif1	ENSMUST00000122810	retained_intron		2	1	164880052	383
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000171414	nonsense_mediated_decay		14	-1	31640878	1567
ENSMUSG00000021189	protein_coding	Atxn3	ENSMUST00000161011	protein_coding	alternative2	12	-1	101958243	1000
ENSMUSG00000039849	protein_coding	Pcif1	ENSMUST00000130213	retained_intron		2	1	164883933	677
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000127204	protein_coding		14	-1	31640912	1699
ENSMUSG00000008429	protein_coding	Herpud2	ENSMUST00000214190	retained_intron		9	-1	25151698	3955
ENSMUSG00000021182	protein_coding	Ccdc88c	ENSMUST00000085096	protein_coding	alternative2	12	-1	101028983	6313
ENSMUSG00000030603	protein_coding	Psmc4	ENSMUST00000135482	retained_intron		7	-1	28050056	1883
ENSMUSG00000025937	protein_coding	Lactb2	ENSMUST00000027071	protein_coding	principal1	1	-1	13660546	4494
ENSMUSG00000021189	protein_coding	Atxn3	ENSMUST00000159883	protein_coding		12	-1	101958148	879
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000113780	protein_coding		X	1	99975606	4915
ENSMUSG00000081954	processed_pseudogene	Gm13626	ENSMUST00000119435	processed_pseudogene		2	-1	61707591	402
ENSMUSG00000030603	protein_coding	Psmc4	ENSMUST00000140053	protein_coding		7	-1	28050048	1244
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000134626	nonsense_mediated_decay		14	-1	31641172	762
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000095719	protein_coding		4	-1	148625362	1011
ENSMUSG00000025937	protein_coding	Lactb2	ENSMUST00000156222	retained_intron		1	-1	13638411	400
ENSMUSG00000070034	protein_coding	Sp110	ENSMUST00000093508	protein_coding	principal1	1	-1	85598817	1921
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000185824	protein_coding		4	-1	148622097	709
ENSMUSG00000030603	protein_coding	Psmc4	ENSMUST00000134486	retained_intron		7	-1	28047349	578
ENSMUSG00000035576	protein_coding	L3mbtl1	ENSMUST00000153416	retained_intron		2	1	162943472	3763
ENSMUSG00000116521	processed_pseudogene	Gm4111	ENSMUST00000229187	processed_pseudogene		16	1	3304392	823
ENSMUSG00000030603	protein_coding	Psmc4	ENSMUST00000126528	retained_intron		7	-1	28050056	616
ENSMUSG00000035576	protein_coding	L3mbtl1	ENSMUST00000156954	protein_coding		2	1	162943475	803
ENSMUSG00000107856	processed_pseudogene	Gm7838	ENSMUST00000203221	processed_pseudogene		6	-1	95926929	1189
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000113778	protein_coding	alternative1	X	1	99975606	4942
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000190696	nonsense_mediated_decay		4	-1	148626770	1411
ENSMUSG00000035576	protein_coding	L3mbtl1	ENSMUST00000137108	processed_transcript		2	1	162943475	675
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000186947	protein_coding		4	-1	148626754	818
ENSMUSG00000035576	protein_coding	L3mbtl1	ENSMUST00000124264	protein_coding		2	1	162948005	616
ENSMUSG00000116389	lincRNA	Gm49504	ENSMUST00000230278	lincRNA		16	1	3346350	1000
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000185673	protein_coding		4	-1	148626323	740
ENSMUSG00000035576	protein_coding	L3mbtl1	ENSMUST00000125296	processed_transcript		2	1	162948005	468
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000162461	protein_coding	alternative2	6	1	119902703	1693
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000190478	retained_intron		4	-1	148626758	370
ENSMUSG00000021440	protein_coding	Cts7	ENSMUST00000224986	protein_coding	principal1	13	-1	61358196	1349
ENSMUSG00000081379	processed_pseudogene	Gm14771	ENSMUST00000118249	processed_pseudogene		X	-1	85236566	203
ENSMUSG00000054385	protein_coding	Ceacam2	ENSMUST00000066503	protein_coding		7	-1	25539857	3140
ENSMUSG00000070034	protein_coding	Sp110	ENSMUST00000131950	retained_intron		1	-1	85598749	2293
ENSMUSG00000082139	processed_pseudogene	Gm16463	ENSMUST00000120527	processed_pseudogene		X	1	85241617	721
ENSMUSG00000070034	protein_coding	Sp110	ENSMUST00000186740	retained_intron		1	-1	85584278	559
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000113781	protein_coding		X	1	99975606	4915
ENSMUSG00000021440	protein_coding	Cts7	ENSMUST00000021892	protein_coding	principal1	13	-1	61358196	1518
ENSMUSG00000026504	protein_coding	Sdccag8	ENSMUST00000056773	protein_coding		1	1	176814660	1551
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000211095	nonsense_mediated_decay		8	1	45658705	2802
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000126067	protein_coding		8	1	45658709	401
ENSMUSG00000021440	protein_coding	Cts7	ENSMUST00000225321	protein_coding		13	-1	61358197	1257
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000128629	retained_intron		14	-1	31641257	709
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000145063	processed_transcript		X	1	100385143	658
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000123547	processed_transcript		X	1	100387255	403
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000136119	retained_intron		8	1	45658784	6425
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000134582	retained_intron		X	1	99975606	1877
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000155210	retained_intron		14	-1	31640946	918
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000113783	protein_coding		X	1	99975606	4930
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000143820	protein_coding		8	1	45658804	871
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000149752	protein_coding		8	1	45661993	355
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000156189	retained_intron		14	-1	31640911	504
ENSMUSG00000054385	protein_coding	Ceacam2	ENSMUST00000064862	protein_coding		7	-1	25539857	3087
ENSMUSG00000021884	protein_coding	Hacl1	ENSMUST00000135751	retained_intron		14	-1	31641286	363
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000113777	protein_coding		X	1	99975781	1056
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000167111	protein_coding		3	-1	153912145	1418
ENSMUSG00000028012	protein_coding	Rrh	ENSMUST00000196317	processed_transcript		3	-1	129822493	1759
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000130011	protein_coding	alternative2	8	1	45661996	3871
ENSMUSG00000018169	protein_coding	Mfng	ENSMUST00000018313	protein_coding	principal1	15	-1	78773475	1865
ENSMUSG00000059327	protein_coding	Eda	ENSMUST00000071453	protein_coding		X	1	99975781	1152
ENSMUSG00000115022	protein_coding	Gm49387	ENSMUST00000167175	nonsense_mediated_decay	principal1	14	-1	31640878	1739
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000150102	protein_coding		8	1	45688333	430
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000187573	retained_intron		9	1	105642978	4929
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000139103	protein_coding		8	1	45688337	293
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000190358	protein_coding		9	1	105642981	611
ENSMUSG00000114944	processed_pseudogene	Gm48299	ENSMUST00000224037	processed_pseudogene		14	1	65166914	278
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000165113	protein_coding		4	-1	148626996	6495
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000211442	retained_intron		8	1	45743181	2454
ENSMUSG00000070034	protein_coding	Sp110	ENSMUST00000143363	processed_transcript		1	-1	85598779	2583
ENSMUSG00000070034	protein_coding	Sp110	ENSMUST00000152399	processed_transcript		1	-1	85598779	574
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000191117	retained_intron		9	1	105643008	3613
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000172073	protein_coding		4	-1	148626996	6513
ENSMUSG00000102596	processed_pseudogene	Gm20203	ENSMUST00000192352	processed_pseudogene		1	-1	191791314	332
ENSMUSG00000018169	protein_coding	Mfng	ENSMUST00000123518	retained_intron		15	-1	78767190	706
ENSMUSG00000070034	protein_coding	Sp110	ENSMUST00000151690	processed_transcript		1	-1	85598779	582
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000187446	retained_intron		9	1	105643015	4124
ENSMUSG00000054385	protein_coding	Ceacam2	ENSMUST00000044547	protein_coding	principal1	7	-1	25539819	2844
ENSMUSG00000018169	protein_coding	Mfng	ENSMUST00000136795	retained_intron		15	-1	78767164	717
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000125295	protein_coding		8	1	45763108	5503
ENSMUSG00000070034	protein_coding	Sp110	ENSMUST00000150114	processed_transcript		1	-1	85598779	499
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000161045	nonsense_mediated_decay		6	1	119902703	1604
ENSMUSG00000018169	protein_coding	Mfng	ENSMUST00000128389	processed_transcript		15	-1	78771894	319
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000132767	processed_transcript		8	1	45763846	799
ENSMUSG00000041459	protein_coding	Tardbp	ENSMUST00000105702	protein_coding		4	-1	148626996	6425
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000004646	protein_coding	principal1	5	-1	113908758	3491
ENSMUSG00000070034	protein_coding	Sp110	ENSMUST00000130727	processed_transcript		1	-1	85598779	830
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000140088	protein_coding		8	1	45769839	559
ENSMUSG00000054385	protein_coding	Ceacam2	ENSMUST00000145681	processed_transcript		7	-1	25537093	656
ENSMUSG00000026504	protein_coding	Sdccag8	ENSMUST00000133305	retained_intron		1	1	176814660	2971
ENSMUSG00000108503	processed_pseudogene	Gm20949	ENSMUST00000206478	processed_pseudogene		7	-1	25422792	952
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000155858	protein_coding		8	1	45770555	692
ENSMUSG00000114693	lincRNA	Gm41177	ENSMUST00000223930	lincRNA		14	1	65172355	589
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000089950	protein_coding	principal1	3	-1	153913009	1381
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000132730	retained_intron		8	1	45772354	660
ENSMUSG00000114693	lincRNA	Gm41177	ENSMUST00000225755	lincRNA		14	1	65174069	520
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000146627	protein_coding		8	1	45775669	598
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000211721	retained_intron		8	1	45784742	3826
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000163995	retained_intron		5	-1	113850862	805
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000136344	retained_intron		8	1	45803208	626
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000238803	protein_coding		8	1	45805653	3272
ENSMUSG00000114658	lincRNA	Gm30008	ENSMUST00000225852	lincRNA		14	-1	65174959	526
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000168634	retained_intron		5	-1	113849865	799
ENSMUSG00000060188	protein_coding	Cxcl17	ENSMUST00000200880	protein_coding	principal2	7	-1	25412886	760
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000172016	retained_intron		5	-1	113847620	202
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000156549	processed_transcript		8	1	45805804	430
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000111283	retained_intron		5	-1	113849670	666
ENSMUSG00000060188	protein_coding	Cxcl17	ENSMUST00000074040	protein_coding	alternative2	7	-1	25412886	761
ENSMUSG00000040284	protein_coding	Gzmg	ENSMUST00000015578	protein_coding	principal1	14	-1	56159579	909
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000159356	processed_transcript		6	1	119902705	500
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000198350	nonsense_mediated_decay		3	-1	153912927	1399
ENSMUSG00000108518	processed_pseudogene	Gm5587	ENSMUST00000206270	processed_pseudogene		7	-1	25419826	674
ENSMUSG00000081732	processed_pseudogene	Gm15495	ENSMUST00000117570	processed_pseudogene		7	-1	25443463	1312
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000160877	retained_intron		6	1	119902705	948
ENSMUSG00000114908	processed_pseudogene	Gm9547	ENSMUST00000224928	processed_pseudogene		14	-1	56162801	671
ENSMUSG00000022951	protein_coding	Rcan1	ENSMUST00000023672	protein_coding	principal1	16	-1	92400077	2190
ENSMUSG00000057074	protein_coding	Ces1g	ENSMUST00000044602	protein_coding	principal1	8	-1	93337308	2388
ENSMUSG00000083283	processed_pseudogene	Gm15361	ENSMUST00000119320	processed_pseudogene		X	-1	74494822	444
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000161816	retained_intron		6	1	119902728	1603
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000166647	processed_transcript		5	-1	113874648	748
ENSMUSG00000022951	protein_coding	Rcan1	ENSMUST00000232239	protein_coding		16	-1	92466143	2319
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000168493	processed_transcript		5	-1	113858774	524
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000159291	processed_transcript		6	1	119902734	854
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000162255	processed_transcript		6	1	119902734	760
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000162590	retained_intron		6	1	119902739	676
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000196565	nonsense_mediated_decay		3	-1	153912993	1775
ENSMUSG00000022951	protein_coding	Rcan1	ENSMUST00000231410	protein_coding		16	-1	92458475	2222
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000163264	protein_coding		5	-1	113882945	456
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000168399	protein_coding		5	-1	113882431	393
ENSMUSG00000022951	protein_coding	Rcan1	ENSMUST00000231813	nonsense_mediated_decay		16	-1	92393632	440
ENSMUSG00000004530	protein_coding	Coro1c	ENSMUST00000171630	retained_intron		5	-1	113908645	5130
ENSMUSG00000022951	protein_coding	Rcan1	ENSMUST00000232197	protein_coding		16	-1	92470867	1506
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000032269	protein_coding	principal3	6	1	119902776	1617
ENSMUSG00000090458	antisense	Gm17122	ENSMUST00000166047	antisense		5	1	113842601	372
ENSMUSG00000022951	protein_coding	Rcan1	ENSMUST00000232457	processed_transcript		16	-1	92399978	387
ENSMUSG00000028012	protein_coding	Rrh	ENSMUST00000200079	protein_coding		3	-1	129822505	1106
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000196266	nonsense_mediated_decay		3	-1	153912081	1271
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000161860	retained_intron		6	1	119913238	804
ENSMUSG00000022496	protein_coding	Tnfrsf17	ENSMUST00000023140	protein_coding	principal1	16	1	11313812	815
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000160558	retained_intron		6	1	119913951	487
ENSMUSG00000022951	protein_coding	Rcan1	ENSMUST00000060005	protein_coding		16	-1	92466146	2324
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000162009	retained_intron		6	1	119915252	522
ENSMUSG00000030166	protein_coding	Rad52	ENSMUST00000204319	retained_intron		6	1	119918082	3553
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000196956	nonsense_mediated_decay		3	-1	153912081	1055
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000200209	nonsense_mediated_decay		3	-1	153912081	1169
ENSMUSG00000081626	processed_pseudogene	Gm14369	ENSMUST00000121355	processed_pseudogene		X	1	5391640	285
ENSMUSG00000091239	protein_coding	Vmn2r76	ENSMUST00000233075	protein_coding		7	-1	86246308	11503
ENSMUSG00000082975	processed_pseudogene	Gm14363	ENSMUST00000122304	processed_pseudogene		X	-1	5402129	409
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000200631	nonsense_mediated_decay		3	-1	153912081	1129
ENSMUSG00000091239	protein_coding	Vmn2r76	ENSMUST00000233317	protein_coding	alternative2	7	-1	86246308	25851
ENSMUSG00000091239	protein_coding	Vmn2r76	ENSMUST00000233312	protein_coding		7	-1	86246308	14597
ENSMUSG00000091239	protein_coding	Vmn2r76	ENSMUST00000233928	protein_coding	alternative2	7	-1	86246308	3767
ENSMUSG00000091239	protein_coding	Vmn2r76	ENSMUST00000233231	nonsense_mediated_decay		7	-1	86246308	4036
ENSMUSG00000091239	protein_coding	Vmn2r76	ENSMUST00000233211	retained_intron		7	-1	86246308	4153
ENSMUSG00000026504	protein_coding	Sdccag8	ENSMUST00000027785	protein_coding	principal1	1	1	176814660	2776
ENSMUSG00000091239	protein_coding	Vmn2r76	ENSMUST00000232799	protein_coding		7	-1	86246308	2960
ENSMUSG00000091239	protein_coding	Vmn2r76	ENSMUST00000233744	protein_coding		7	-1	86246308	3158
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000197829	nonsense_mediated_decay		3	-1	153912033	654
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000198094	nonsense_mediated_decay		3	-1	153912955	631
ENSMUSG00000091239	protein_coding	Vmn2r76	ENSMUST00000165771	protein_coding	principal2	7	-1	86246201	2562
ENSMUSG00000038975	protein_coding	Rabggtb	ENSMUST00000197147	processed_transcript		3	-1	153912931	382
ENSMUSG00000092080	protein_coding	Vmn2r16	ENSMUST00000165180	protein_coding	principal2	5	1	109330162	8538
ENSMUSG00000107718	transcribed_unprocessed_pseudogene	Vmn2r-ps34	ENSMUST00000236345	processed_transcript		6	-1	124148537	1123
ENSMUSG00000031626	protein_coding	Sorbs2	ENSMUST00000067065	protein_coding		8	1	45507788	6337
ENSMUSG00000084323	processed_pseudogene	Gm14438	ENSMUST00000121572	processed_pseudogene		2	1	175270556	624
ENSMUSG00000107718	transcribed_unprocessed_pseudogene	Vmn2r-ps34	ENSMUST00000236620	processed_transcript		6	-1	124185906	1368
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000136933	nonsense_mediated_decay		2	-1	155930060	2413
ENSMUSG00000092080	protein_coding	Vmn2r16	ENSMUST00000232912	protein_coding	alternative2	5	1	109330162	8679
ENSMUSG00000107718	transcribed_unprocessed_pseudogene	Vmn2r-ps34	ENSMUST00000204750	transcribed_unprocessed_pseudogene		6	-1	124173146	2575
ENSMUSG00000026504	protein_coding	Sdccag8	ENSMUST00000123409	nonsense_mediated_decay		1	1	176814660	2891
ENSMUSG00000081739	processed_pseudogene	Mdm4-ps	ENSMUST00000121299	processed_pseudogene		X	1	128261411	6514
ENSMUSG00000110508	processed_pseudogene	Gm8940	ENSMUST00000212585	processed_pseudogene		8	-1	107690844	219
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000152818	processed_transcript		2	-1	155930060	1997
ENSMUSG00000026504	protein_coding	Sdccag8	ENSMUST00000139589	processed_transcript		1	1	176998009	659
ENSMUSG00000028012	protein_coding	Rrh	ENSMUST00000029648	protein_coding	alternative2	3	-1	129822491	1506
ENSMUSG00000078901	protein_coding	Gm14440	ENSMUST00000109051	protein_coding	principal1	2	1	175275125	3382
ENSMUSG00000104391	TEC	Gm37960	ENSMUST00000192402	TEC		1	-1	177036936	1897
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000151078	nonsense_mediated_decay		2	-1	155930036	2107
ENSMUSG00000110625	lincRNA	5033426E14Rik	ENSMUST00000212462	lincRNA		8	1	107869685	783
ENSMUSG00000103367	processed_pseudogene	Gm38158	ENSMUST00000194617	processed_pseudogene		1	1	176835724	339
ENSMUSG00000085440	antisense	Sorbs2os	ENSMUST00000135116	antisense		8	-1	45819297	2474
ENSMUSG00000078901	protein_coding	Gm14440	ENSMUST00000098998	protein_coding		2	1	175283298	192
ENSMUSG00000102133	TEC	Gm37106	ENSMUST00000193760	TEC		1	-1	177046773	1532
ENSMUSG00000057540	protein_coding	Olfr310	ENSMUST00000217724	protein_coding	principal1	7	-1	86277172	1400
ENSMUSG00000082126	processed_pseudogene	Gm14975	ENSMUST00000118741	processed_pseudogene		X	1	128287236	664
ENSMUSG00000084954	antisense	Gm16351	ENSMUST00000209660	antisense		8	-1	45605140	337
ENSMUSG00000102475	processed_pseudogene	Gm37246	ENSMUST00000192665	processed_pseudogene		1	1	176881571	835
ENSMUSG00000115573	processed_pseudogene	Gm49131	ENSMUST00000226676	processed_pseudogene		14	1	73335092	250
ENSMUSG00000102427	TEC	Gm37463	ENSMUST00000193819	TEC		1	-1	177230686	796
ENSMUSG00000091623	antisense	Gm17092	ENSMUST00000166606	antisense		5	1	99977686	2011
ENSMUSG00000028012	protein_coding	Rrh	ENSMUST00000196902	protein_coding	principal2	3	-1	129822587	1250
ENSMUSG00000085699	unprocessed_pseudogene	Gm14298	ENSMUST00000139032	unprocessed_pseudogene		2	-1	175304333	237
ENSMUSG00000084954	antisense	Gm16351	ENSMUST00000142008	antisense		8	-1	45596744	250
ENSMUSG00000091623	antisense	Gm17092	ENSMUST00000046721	antisense		5	1	99979061	603
ENSMUSG00000057540	protein_coding	Olfr310	ENSMUST00000081918	protein_coding	principal1	7	-1	86269811	1082
ENSMUSG00000087082	antisense	Gm15423	ENSMUST00000150600	antisense		1	-1	176932711	1430
ENSMUSG00000094805	protein_coding	Olfr311	ENSMUST00000216473	protein_coding	principal1	11	1	58839259	2961
ENSMUSG00000028012	protein_coding	Rrh	ENSMUST00000197535	nonsense_mediated_decay		3	-1	129822462	763
ENSMUSG00000094805	protein_coding	Olfr311	ENSMUST00000214776	processed_transcript		11	1	58839251	1675
ENSMUSG00000103504	TEC	Gm38390	ENSMUST00000194859	TEC		X	1	128375907	1065
ENSMUSG00000103646	TEC	Gm37706	ENSMUST00000195379	TEC		1	-1	177170862	2765
ENSMUSG00000103584	unprocessed_pseudogene	Gm38053	ENSMUST00000193938	unprocessed_pseudogene		1	-1	176854559	160
ENSMUSG00000028012	protein_coding	Rrh	ENSMUST00000197295	processed_transcript		3	-1	129822494	1207
ENSMUSG00000085722	transcribed_processed_pseudogene	Gm4916	ENSMUST00000126139	transcribed_processed_pseudogene		X	1	128375394	642
ENSMUSG00000094805	protein_coding	Olfr311	ENSMUST00000071625	protein_coding	principal1	11	1	58841116	927
ENSMUSG00000102749	TEC	Gm37598	ENSMUST00000194506	TEC		1	-1	177075784	1301
ENSMUSG00000028012	protein_coding	Rrh	ENSMUST00000196281	retained_intron		3	-1	129822458	3005
ENSMUSG00000028012	protein_coding	Rrh	ENSMUST00000171313	protein_coding	principal2	3	-1	129822493	1759
ENSMUSG00000072915	protein_coding	Gm12258	ENSMUST00000139337	protein_coding	principal1	11	1	58847158	4100
ENSMUSG00000072915	protein_coding	Gm12258	ENSMUST00000143407	processed_transcript		11	1	58847216	373
ENSMUSG00000072915	protein_coding	Gm12258	ENSMUST00000093768	protein_coding		11	1	58859433	2524
ENSMUSG00000078899	protein_coding	Gm4631	ENSMUST00000121393	protein_coding	principal1	2	-1	175338197	4402
ENSMUSG00000078899	protein_coding	Gm4631	ENSMUST00000109050	protein_coding		2	-1	175327598	1494
ENSMUSG00000018362	protein_coding	Kpna2	ENSMUST00000145331	nonsense_mediated_decay		11	-1	106999440	1843
ENSMUSG00000040428	protein_coding	Plekha4	ENSMUST00000211227	protein_coding	alternative2	7	1	45526330	2133
ENSMUSG00000086244	lincRNA	4930558G05Rik	ENSMUST00000122848	lincRNA		X	1	129064297	494
ENSMUSG00000035491	protein_coding	Fthl17a	ENSMUST00000048382	protein_coding	principal1	X	1	85249679	835
ENSMUSG00000072778	protein_coding	Vmn2r27	ENSMUST00000233936	protein_coding		6	-1	124231856	2834
ENSMUSG00000026622	protein_coding	Nek2	ENSMUST00000027931	protein_coding	principal1	1	1	191821444	3227
ENSMUSG00000084337	processed_pseudogene	Gm14986	ENSMUST00000121262	processed_pseudogene		X	-1	129518526	1002
ENSMUSG00000042404	protein_coding	Dennd4b	ENSMUST00000129564	protein_coding	alternative2	3	1	90265185	5647
ENSMUSG00000072778	protein_coding	Vmn2r27	ENSMUST00000100968	protein_coding	principal1	6	-1	124231856	3585
ENSMUSG00000083839	processed_pseudogene	Gm14765	ENSMUST00000121954	processed_pseudogene		X	1	85431827	326
ENSMUSG00000026622	protein_coding	Nek2	ENSMUST00000126446	retained_intron		1	1	191821510	2044
ENSMUSG00000078898	protein_coding	Zfp968	ENSMUST00000131676	protein_coding	principal1	2	1	175372436	1272
ENSMUSG00000026622	protein_coding	Nek2	ENSMUST00000150839	retained_intron		1	1	191822182	767
ENSMUSG00000027716	protein_coding	Trpc3	ENSMUST00000029271	protein_coding	principal1	3	-1	36690167	3694
ENSMUSG00000042404	protein_coding	Dennd4b	ENSMUST00000098914	protein_coding	principal2	3	1	90266514	5423
ENSMUSG00000078898	protein_coding	Zfp968	ENSMUST00000109048	protein_coding		2	1	175372462	733
ENSMUSG00000026622	protein_coding	Nek2	ENSMUST00000136733	processed_transcript		1	1	191827148	452
ENSMUSG00000078898	protein_coding	Zfp968	ENSMUST00000109047	protein_coding		2	1	175372492	1480
ENSMUSG00000102840	antisense	Gm38037	ENSMUST00000192600	antisense		1	-1	191821993	1624
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000113200	protein_coding	principal1	2	-1	32961614	4030
ENSMUSG00000081900	processed_pseudogene	Gm14985	ENSMUST00000118693	processed_pseudogene		X	1	129537510	786
ENSMUSG00000025082	protein_coding	Vwa2	ENSMUST00000026068	protein_coding	principal1	19	1	56874249	4049
ENSMUSG00000027716	protein_coding	Trpc3	ENSMUST00000129322	processed_transcript		3	-1	36621339	273
ENSMUSG00000095231	unprocessed_pseudogene	Gm14297	ENSMUST00000129110	unprocessed_pseudogene		2	-1	175401954	291
ENSMUSG00000027716	protein_coding	Trpc3	ENSMUST00000123220	processed_transcript		3	-1	36621361	361
ENSMUSG00000040428	protein_coding	Plekha4	ENSMUST00000211797	nonsense_mediated_decay		7	1	45529993	2655
ENSMUSG00000081874	processed_pseudogene	Gm14983	ENSMUST00000121551	processed_pseudogene		X	-1	129606456	323
ENSMUSG00000027716	protein_coding	Trpc3	ENSMUST00000133542	retained_intron		3	-1	36640620	303
ENSMUSG00000057606	protein_coding	Colq	ENSMUST00000112027	protein_coding	principal1	14	-1	31577383	2837
ENSMUSG00000021621	protein_coding	Zcchc9	ENSMUST00000022121	protein_coding	principal1	13	-1	91807705	1541
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000195713	nonsense_mediated_decay		2	-1	32941829	686
ENSMUSG00000040428	protein_coding	Plekha4	ENSMUST00000210480	protein_coding		7	1	45530040	356
ENSMUSG00000027716	protein_coding	Trpc3	ENSMUST00000146475	retained_intron		3	-1	36690167	2811
ENSMUSG00000039834	protein_coding	Zfp335	ENSMUST00000041361	protein_coding	principal1	2	-1	164911757	4587
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000195776	retained_intron		2	-1	32938799	669
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000127321	protein_coding		2	-1	32961599	770
ENSMUSG00000021621	protein_coding	Zcchc9	ENSMUST00000070886	protein_coding		13	-1	91800980	929
ENSMUSG00000057606	protein_coding	Colq	ENSMUST00000150054	protein_coding		14	-1	31558140	2867
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000133832	protein_coding		2	-1	32961592	668
ENSMUSG00000032808	protein_coding	Cyp2c38	ENSMUST00000035488	protein_coding	principal1	19	-1	39463075	2869
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000147528	protein_coding		2	-1	32959906	452
ENSMUSG00000085744	lincRNA	Gm12259	ENSMUST00000138391	lincRNA		11	1	58865965	328
ENSMUSG00000021621	protein_coding	Zcchc9	ENSMUST00000178637	retained_intron		13	-1	91807705	3421
ENSMUSG00000071235	protein_coding	Vrtn	ENSMUST00000221915	protein_coding		12	1	84641019	516
ENSMUSG00000021621	protein_coding	Zcchc9	ENSMUST00000178084	retained_intron		13	-1	91807661	931
ENSMUSG00000039834	protein_coding	Zfp335	ENSMUST00000183830	nonsense_mediated_decay		2	-1	164911757	4510
ENSMUSG00000042404	protein_coding	Dennd4b	ENSMUST00000156358	nonsense_mediated_decay		3	1	90267461	2551
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000125901	nonsense_mediated_decay		13	-1	24108584	4071
ENSMUSG00000021621	protein_coding	Zcchc9	ENSMUST00000179368	retained_intron		13	-1	91800995	349
ENSMUSG00000040428	protein_coding	Plekha4	ENSMUST00000209517	protein_coding	principal2	7	1	45530105	2577
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000191838	nonsense_mediated_decay		2	-1	32961251	587
ENSMUSG00000039834	protein_coding	Zfp335	ENSMUST00000139247	nonsense_mediated_decay		2	-1	164907665	680
ENSMUSG00000040428	protein_coding	Plekha4	ENSMUST00000211155	protein_coding	alternative2	7	1	45530571	2044
ENSMUSG00000071235	protein_coding	Vrtn	ENSMUST00000222319	protein_coding		12	1	84642555	621
ENSMUSG00000057606	protein_coding	Colq	ENSMUST00000124014	protein_coding		14	-1	31591343	428
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000124492	protein_coding		2	-1	32961593	358
ENSMUSG00000040428	protein_coding	Plekha4	ENSMUST00000211794	retained_intron		7	1	45540829	2415
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000151566	protein_coding		13	-1	24022556	1185
ENSMUSG00000057606	protein_coding	Colq	ENSMUST00000146302	processed_transcript		14	-1	31591319	444
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000145578	protein_coding		2	-1	32961593	458
ENSMUSG00000040428	protein_coding	Plekha4	ENSMUST00000210797	protein_coding		7	1	45549835	646
ENSMUSG00000057606	protein_coding	Colq	ENSMUST00000129238	processed_transcript		14	-1	31591308	198
ENSMUSG00000071235	protein_coding	Vrtn	ENSMUST00000095551	protein_coding	principal1	12	1	84642896	3028
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000145699	processed_transcript		2	-1	32961600	376
ENSMUSG00000040428	protein_coding	Plekha4	ENSMUST00000211348	protein_coding		7	1	45549889	476
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000138015	processed_transcript		2	-1	32961606	377
ENSMUSG00000071235	protein_coding	Vrtn	ENSMUST00000166772	protein_coding	principal1	12	1	84641019	3098
ENSMUSG00000040428	protein_coding	Plekha4	ENSMUST00000211106	retained_intron		7	1	45552690	1457
ENSMUSG00000040428	protein_coding	Plekha4	ENSMUST00000051810	protein_coding	principal2	7	1	45526330	2660
ENSMUSG00000071235	protein_coding	Vrtn	ENSMUST00000167227	protein_coding	principal1	12	1	84642555	3440
ENSMUSG00000026792	protein_coding	Lrsam1	ENSMUST00000028132	protein_coding	principal1	2	-1	32961255	3981
ENSMUSG00000114802	unprocessed_pseudogene	Cts7-ps	ENSMUST00000225483	unprocessed_pseudogene		13	-1	61439870	1022
ENSMUSG00000110144	antisense	Gm45564	ENSMUST00000210460	antisense		7	-1	45551615	530
ENSMUSG00000060594	protein_coding	Layn	ENSMUST00000217212	protein_coding	alternative2	9	-1	51077066	1500
ENSMUSG00000114405	processed_pseudogene	Gm47825	ENSMUST00000224020	processed_pseudogene		13	1	61443965	231
ENSMUSG00000042404	protein_coding	Dennd4b	ENSMUST00000151648	nonsense_mediated_decay		3	1	90269016	1073
ENSMUSG00000060594	protein_coding	Layn	ENSMUST00000214090	processed_transcript		9	-1	51077047	651
ENSMUSG00000021265	protein_coding	Slc25a29	ENSMUST00000021693	protein_coding	principal1	12	-1	108835883	1976
ENSMUSG00000042404	protein_coding	Dennd4b	ENSMUST00000138376	protein_coding		3	1	90275462	792
ENSMUSG00000114667	unprocessed_pseudogene	Ctsm-ps2	ENSMUST00000225450	unprocessed_pseudogene		13	-1	61490329	1078
ENSMUSG00000060594	protein_coding	Layn	ENSMUST00000214993	protein_coding		9	-1	51077072	468
ENSMUSG00000042404	protein_coding	Dennd4b	ENSMUST00000143803	retained_intron		3	1	90277403	569
ENSMUSG00000020491	protein_coding	2810021J22Rik	ENSMUST00000073924	protein_coding	principal1	11	1	58867216	3866
ENSMUSG00000021265	protein_coding	Slc25a29	ENSMUST00000137023	retained_intron		12	-1	108831617	770
ENSMUSG00000020231	protein_coding	Dip2a	ENSMUST00000160048	protein_coding	alternative2	10	-1	76345291	6551
ENSMUSG00000042404	protein_coding	Dennd4b	ENSMUST00000141139	retained_intron		3	1	90278008	482
ENSMUSG00000021265	protein_coding	Slc25a29	ENSMUST00000139714	retained_intron		12	-1	108835820	466
ENSMUSG00000060594	protein_coding	Layn	ENSMUST00000098782	protein_coding	principal2	9	-1	51077094	1786
ENSMUSG00000113317	antisense	Gm48573	ENSMUST00000221117	antisense		12	1	84677300	177
ENSMUSG00000020491	protein_coding	2810021J22Rik	ENSMUST00000132570	protein_coding		11	1	58867267	424
ENSMUSG00000078695	protein_coding	Cisd3	ENSMUST00000107583	protein_coding	principal2	11	1	97685953	737
ENSMUSG00000033014	protein_coding	Trim33	ENSMUST00000029444	protein_coding	principal4	3	1	103279293	8875
ENSMUSG00000060012	protein_coding	Kif13b	ENSMUST00000224126	protein_coding		14	1	64647265	635
ENSMUSG00000093663	translated_unprocessed_pseudogene	Gm7171	ENSMUST00000177413	translated_unprocessed_pseudogene		5	1	109396330	1349
ENSMUSG00000020900	protein_coding	Myh10	ENSMUST00000102611	protein_coding	principal2	11	1	68691915	7791
ENSMUSG00000060012	protein_coding	Kif13b	ENSMUST00000224507	retained_intron		14	1	64652542	3045
ENSMUSG00000060012	protein_coding	Kif13b	ENSMUST00000231130	retained_intron		14	1	64652560	751
ENSMUSG00000078695	protein_coding	Cisd3	ENSMUST00000107584	protein_coding	alternative2	11	1	97685826	546
ENSMUSG00000032056	protein_coding	Btg4	ENSMUST00000214452	protein_coding		9	1	51060901	352
ENSMUSG00000078695	protein_coding	Cisd3	ENSMUST00000107585	protein_coding	alternative2	11	1	97685843	586
ENSMUSG00000032056	protein_coding	Btg4	ENSMUST00000216453	processed_transcript		9	1	51060922	424
ENSMUSG00000078695	protein_coding	Cisd3	ENSMUST00000145623	processed_transcript		11	1	97685977	119
ENSMUSG00000033014	protein_coding	Trim33	ENSMUST00000106860	protein_coding	alternative2	3	1	103279879	5025
ENSMUSG00000020900	protein_coding	Myh10	ENSMUST00000018887	protein_coding	alternative1	11	1	68692112	7667
ENSMUSG00000028369	protein_coding	Svep1	ENSMUST00000042850	protein_coding	principal1	4	-1	58206596	11629
ENSMUSG00000020231	protein_coding	Dip2a	ENSMUST00000159807	retained_intron		10	-1	76285821	4177
ENSMUSG00000033014	protein_coding	Trim33	ENSMUST00000197779	protein_coding		3	1	103311439	577
ENSMUSG00000020900	protein_coding	Myh10	ENSMUST00000139059	processed_transcript		11	1	68814362	1811
ENSMUSG00000066500	protein_coding	Izumo2	ENSMUST00000085422	protein_coding	principal1	7	1	44708742	632
ENSMUSG00000033014	protein_coding	Trim33	ENSMUST00000196678	retained_intron		3	1	103321451	667
ENSMUSG00000037001	protein_coding	Zfp39	ENSMUST00000102703	protein_coding	principal1	11	-1	58904225	3890
ENSMUSG00000115685	TEC	D730044K07Rik	ENSMUST00000228100	TEC		15	1	34442980	1833
ENSMUSG00000020900	protein_coding	Myh10	ENSMUST00000145408	processed_transcript		11	1	68783432	278
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000173547	protein_coding		14	1	59201209	765
ENSMUSG00000020231	protein_coding	Dip2a	ENSMUST00000036033	protein_coding	principal2	10	-1	76345260	6322
ENSMUSG00000022108	protein_coding	Itm2b	ENSMUST00000022704	protein_coding	principal1	14	-1	73385289	1796
ENSMUSG00000033014	protein_coding	Trim33	ENSMUST00000198969	retained_intron		3	1	103326086	795
ENSMUSG00000020900	protein_coding	Myh10	ENSMUST00000124006	processed_transcript		11	1	68811427	558
ENSMUSG00000028581	protein_coding	Laptm5	ENSMUST00000151698	protein_coding	principal2	4	1	130913125	2600
ENSMUSG00000071234	protein_coding	Syndig1l	ENSMUST00000095550	protein_coding	principal1	12	-1	84698831	2524
ENSMUSG00000028369	protein_coding	Svep1	ENSMUST00000128783	processed_transcript		4	-1	58206859	3304
ENSMUSG00000018362	protein_coding	Kpna2	ENSMUST00000018506	protein_coding	principal1	11	-1	106999541	2054
ENSMUSG00000087654	antisense	Gm12256	ENSMUST00000132394	antisense		11	1	58889710	446
ENSMUSG00000020900	protein_coding	Myh10	ENSMUST00000108673	protein_coding		11	1	68692081	1315
ENSMUSG00000028369	protein_coding	Svep1	ENSMUST00000146329	processed_transcript		4	-1	58206688	2451
ENSMUSG00000020231	protein_coding	Dip2a	ENSMUST00000159486	retained_intron		10	-1	76270571	810
ENSMUSG00000033014	protein_coding	Trim33	ENSMUST00000198706	nonsense_mediated_decay		3	1	103326178	1788
ENSMUSG00000028581	protein_coding	Laptm5	ENSMUST00000156225	protein_coding		4	1	130913308	361
ENSMUSG00000022108	protein_coding	Itm2b	ENSMUST00000226722	retained_intron		14	-1	73368505	935
ENSMUSG00000018362	protein_coding	Kpna2	ENSMUST00000156495	retained_intron		11	-1	106992627	534
ENSMUSG00000071234	protein_coding	Syndig1l	ENSMUST00000222422	protein_coding	principal1	12	-1	84698754	1758
ENSMUSG00000028369	protein_coding	Svep1	ENSMUST00000149152	processed_transcript		4	-1	58206612	3241
ENSMUSG00000020900	protein_coding	Myh10	ENSMUST00000143032	processed_transcript		11	1	68692078	376
ENSMUSG00000021806	protein_coding	Nid2	ENSMUST00000022340	protein_coding	principal1	14	1	19751265	4876
ENSMUSG00000028581	protein_coding	Laptm5	ENSMUST00000139023	processed_transcript		4	1	130913314	351
ENSMUSG00000033014	protein_coding	Trim33	ENSMUST00000197365	protein_coding		3	1	103341682	2737
ENSMUSG00000020231	protein_coding	Dip2a	ENSMUST00000160442	nonsense_mediated_decay		10	-1	76292424	702
ENSMUSG00000022108	protein_coding	Itm2b	ENSMUST00000227454	protein_coding		14	-1	73375945	625
ENSMUSG00000066500	protein_coding	Izumo2	ENSMUST00000209004	nonsense_mediated_decay		7	1	44708742	704
ENSMUSG00000048495	protein_coding	Tyw5	ENSMUST00000162686	protein_coding	principal1	1	-1	57407101	1847
ENSMUSG00000071234	protein_coding	Syndig1l	ENSMUST00000221905	protein_coding		12	-1	84698614	379
ENSMUSG00000018362	protein_coding	Kpna2	ENSMUST00000124541	protein_coding		11	-1	106998487	659
ENSMUSG00000002100	protein_coding	Mybpc3	ENSMUST00000137942	protein_coding	alternative2	2	1	91118144	4134
ENSMUSG00000071234	protein_coding	Syndig1l	ENSMUST00000221793	retained_intron		12	-1	84698613	539
ENSMUSG00000029649	protein_coding	Pomp	ENSMUST00000031654	protein_coding	principal1	5	1	147860461	1579
ENSMUSG00000066500	protein_coding	Izumo2	ENSMUST00000207182	protein_coding		7	1	44709055	490
ENSMUSG00000022108	protein_coding	Itm2b	ENSMUST00000228707	processed_transcript		14	-1	73369124	383
ENSMUSG00000114928	processed_pseudogene	Gm47848	ENSMUST00000225959	processed_pseudogene		13	1	61510288	1231
ENSMUSG00000018362	protein_coding	Kpna2	ENSMUST00000140362	protein_coding		11	-1	106998779	568
ENSMUSG00000022108	protein_coding	Itm2b	ENSMUST00000228637	protein_coding		14	-1	73385198	783
ENSMUSG00000058600	protein_coding	Rpl30	ENSMUST00000142643	protein_coding		15	-1	34442908	505
ENSMUSG00000028581	protein_coding	Laptm5	ENSMUST00000156170	processed_transcript		4	1	130913320	341
ENSMUSG00000020900	protein_coding	Myh10	ENSMUST00000092984	protein_coding		11	1	68692316	7759
ENSMUSG00000029649	protein_coding	Pomp	ENSMUST00000201376	protein_coding		5	1	147860628	383
ENSMUSG00000090675	protein_coding	Olfr111	ENSMUST00000215424	protein_coding	principal1	17	1	37525960	2548
ENSMUSG00000058600	protein_coding	Rpl30	ENSMUST00000135417	retained_intron		15	-1	34443160	2412
ENSMUSG00000028581	protein_coding	Laptm5	ENSMUST00000136082	processed_transcript		4	1	130913321	355
ENSMUSG00000090675	protein_coding	Olfr111	ENSMUST00000214259	protein_coding	principal1	17	1	37508030	2620
ENSMUSG00000020900	protein_coding	Myh10	ENSMUST00000141558	processed_transcript		11	1	68691559	334
ENSMUSG00000029649	protein_coding	Pomp	ENSMUST00000202608	retained_intron		5	1	147860637	334
ENSMUSG00000028581	protein_coding	Laptm5	ENSMUST00000156742	protein_coding	alternative2	4	1	130913358	723
ENSMUSG00000020231	protein_coding	Dip2a	ENSMUST00000162766	retained_intron		10	-1	76345232	2634
ENSMUSG00000090675	protein_coding	Olfr111	ENSMUST00000097325	protein_coding	principal1	17	1	37529957	1041
ENSMUSG00000018362	protein_coding	Kpna2	ENSMUST00000144834	protein_coding		11	-1	106999450	732
ENSMUSG00000021806	protein_coding	Nid2	ENSMUST00000225791	retained_intron		14	1	19751284	3976
ENSMUSG00000028581	protein_coding	Laptm5	ENSMUST00000123550	processed_transcript		4	1	130915468	342
ENSMUSG00000029649	protein_coding	Pomp	ENSMUST00000201120	protein_coding		5	1	147860653	3850
ENSMUSG00000018362	protein_coding	Kpna2	ENSMUST00000106768	protein_coding		11	-1	106999369	541
ENSMUSG00000021806	protein_coding	Nid2	ENSMUST00000224263	protein_coding		14	1	19768237	4105
ENSMUSG00000032056	protein_coding	Btg4	ENSMUST00000213680	protein_coding	principal2	9	1	51105878	1282
ENSMUSG00000028581	protein_coding	Laptm5	ENSMUST00000143450	processed_transcript		4	1	130915666	404
ENSMUSG00000020231	protein_coding	Dip2a	ENSMUST00000105417	protein_coding	alternative2	10	-1	76345291	6383
ENSMUSG00000029649	protein_coding	Pomp	ENSMUST00000202222	processed_transcript		5	1	147870385	325
ENSMUSG00000028581	protein_coding	Laptm5	ENSMUST00000030316	protein_coding		4	1	130915949	1322
ENSMUSG00000029649	protein_coding	Pomp	ENSMUST00000202621	retained_intron		5	1	147872434	332
ENSMUSG00000028581	protein_coding	Laptm5	ENSMUST00000125332	processed_transcript		4	1	130932032	397
ENSMUSG00000107079	processed_pseudogene	Gm35648	ENSMUST00000202304	processed_pseudogene		5	-1	147868548	475
ENSMUSG00000021806	protein_coding	Nid2	ENSMUST00000224057	retained_intron		14	1	19805236	543
ENSMUSG00000044597	protein_coding	Mycs	ENSMUST00000058404	protein_coding	principal1	X	-1	5469265	2368
ENSMUSG00000087521	antisense	AI646519	ENSMUST00000233565	antisense		2	-1	147362511	259
ENSMUSG00000020900	protein_coding	Myh10	ENSMUST00000155765	retained_intron		11	1	68692154	2906
ENSMUSG00000082701	processed_pseudogene	Gm14460	ENSMUST00000121511	processed_pseudogene		2	-1	78513336	639
ENSMUSG00000078897	protein_coding	Gm4724	ENSMUST00000109045	protein_coding	principal1	2	-1	175435807	1659
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000173938	protein_coding	principal1	11	1	80428623	1626
ENSMUSG00000058600	protein_coding	Rpl30	ENSMUST00000079735	protein_coding	principal1	15	-1	34443640	886
ENSMUSG00000078897	protein_coding	Gm4724	ENSMUST00000152941	protein_coding		2	-1	175435782	1198
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000100125	protein_coding	principal1	16	-1	17531136	1248
ENSMUSG00000085463	lincRNA	9430024E24Rik	ENSMUST00000130532	lincRNA		2	-1	33718899	713
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000231548	protein_coding	principal1	16	-1	17531047	1110
ENSMUSG00000078897	protein_coding	Gm4724	ENSMUST00000153210	processed_transcript		2	-1	175435800	814
ENSMUSG00000078897	protein_coding	Gm4724	ENSMUST00000109046	protein_coding	principal1	2	-1	175432182	1497
ENSMUSG00000025003	protein_coding	Cyp2c39	ENSMUST00000025968	protein_coding	principal1	19	1	39510862	1817
ENSMUSG00000087521	antisense	AI646519	ENSMUST00000140987	antisense		2	-1	147362793	735
ENSMUSG00000102269	processed_pseudogene	Gm7357	ENSMUST00000195361	processed_pseudogene		1	1	4522905	2991
ENSMUSG00000058600	protein_coding	Rpl30	ENSMUST00000009039	protein_coding	principal1	15	-1	34443222	570
ENSMUSG00000032056	protein_coding	Btg4	ENSMUST00000114431	protein_coding	principal2	9	1	51116001	1486
ENSMUSG00000106900	processed_pseudogene	Gm2040	ENSMUST00000202979	processed_pseudogene		5	1	75108635	289
ENSMUSG00000060012	protein_coding	Kif13b	ENSMUST00000224503	protein_coding	alternative2	14	1	64652602	8865
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000232046	processed_transcript		16	-1	17530752	786
ENSMUSG00000086063	antisense	Gm12257	ENSMUST00000148244	antisense		11	1	58904402	585
ENSMUSG00000103003	processed_pseudogene	Gm38076	ENSMUST00000193889	processed_pseudogene		1	-1	4535286	450
ENSMUSG00000058600	protein_coding	Rpl30	ENSMUST00000136653	retained_intron		15	-1	34441665	464
ENSMUSG00000032056	protein_coding	Btg4	ENSMUST00000213117	protein_coding	alternative2	9	1	51116005	1126
ENSMUSG00000060012	protein_coding	Kif13b	ENSMUST00000224677	retained_intron		14	1	64788003	1618
ENSMUSG00000016940	protein_coding	Kctd2	ENSMUST00000103035	protein_coding	principal1	11	1	115420128	1764
ENSMUSG00000107258	unprocessed_pseudogene	Olfr1401-ps1	ENSMUST00000202296	unprocessed_pseudogene		5	-1	75141558	211
ENSMUSG00000058600	protein_coding	Rpl30	ENSMUST00000140527	processed_transcript		15	-1	34443259	388
ENSMUSG00000060012	protein_coding	Kif13b	ENSMUST00000100473	protein_coding	principal2	14	1	64652531	5603
ENSMUSG00000064057	protein_coding	Scgb3a1	ENSMUST00000043873	protein_coding	principal3	11	1	49663610	493
ENSMUSG00000019699	protein_coding	Akt3	ENSMUST00000019843	protein_coding		1	-1	177248805	1511
ENSMUSG00000033430	protein_coding	Terf2ip	ENSMUST00000052138	protein_coding	principal1	8	1	112011398	3560
ENSMUSG00000016940	protein_coding	Kctd2	ENSMUST00000106533	protein_coding		11	1	115420150	2649
ENSMUSG00000037034	protein_coding	Pax1	ENSMUST00000126068	protein_coding		2	1	147361925	1529
ENSMUSG00000016940	protein_coding	Kctd2	ENSMUST00000123345	protein_coding		11	1	115420182	904
ENSMUSG00000107192	lincRNA	Gm19583	ENSMUST00000202993	lincRNA		5	1	75110321	1366
ENSMUSG00000033430	protein_coding	Terf2ip	ENSMUST00000212732	retained_intron		8	1	112011402	2139
ENSMUSG00000016940	protein_coding	Kctd2	ENSMUST00000143856	retained_intron		11	1	115420312	642
ENSMUSG00000104328	lincRNA	Gm37323	ENSMUST00000195771	lincRNA		1	-1	4586252	2773
ENSMUSG00000092086	processed_pseudogene	Gm6793	ENSMUST00000071732	processed_pseudogene		8	-1	112015008	1056
ENSMUSG00000019699	protein_coding	Akt3	ENSMUST00000111159	protein_coding	principal1	1	-1	177258203	4906
ENSMUSG00000064057	protein_coding	Scgb3a1	ENSMUST00000076006	protein_coding	alternative2	11	1	49663610	598
ENSMUSG00000019699	protein_coding	Akt3	ENSMUST00000211158	processed_transcript		1	-1	177257592	249
ENSMUSG00000101481	sense_intronic	1700123O21Rik	ENSMUST00000190515	sense_intronic		16	1	5975585	677
ENSMUSG00000082046	processed_pseudogene	Gm14464	ENSMUST00000119658	processed_pseudogene		2	1	78597669	1254
ENSMUSG00000102735	processed_pseudogene	Gm7369	ENSMUST00000192738	processed_pseudogene		1	1	4610471	936
ENSMUSG00000112748	processed_pseudogene	Gm6331	ENSMUST00000217890	processed_pseudogene		10	1	71162928	450
ENSMUSG00000084239	processed_pseudogene	Gm14463	ENSMUST00000121117	processed_pseudogene		2	1	78657429	498
ENSMUSG00000016940	protein_coding	Kctd2	ENSMUST00000143775	processed_transcript		11	1	115429353	517
ENSMUSG00000110435	processed_pseudogene	Gm3635	ENSMUST00000212314	processed_pseudogene		8	-1	112236966	354
ENSMUSG00000109262	lincRNA	Gm44744	ENSMUST00000208234	lincRNA		7	1	28054732	852
ENSMUSG00000098104	processed_pseudogene	Gm6085	ENSMUST00000182774	processed_pseudogene		1	-1	4689403	1470
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000232114	nonsense_mediated_decay		16	-1	17531112	1120
ENSMUSG00000084101	processed_pseudogene	Gm17014	ENSMUST00000120765	processed_pseudogene		2	-1	78845453	168
ENSMUSG00000019699	protein_coding	Akt3	ENSMUST00000111160	protein_coding	principal1	1	-1	177248767	4735
ENSMUSG00000103251	TEC	Gm37519	ENSMUST00000191687	TEC		1	1	176974236	2210
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000232041	protein_coding		16	-1	17531052	766
ENSMUSG00000103163	TEC	Gm38146	ENSMUST00000194121	TEC		1	-1	177135453	1293
ENSMUSG00000104726	processed_pseudogene	Gm18384	ENSMUST00000195974	processed_pseudogene		3	1	119968731	808
ENSMUSG00000060510	protein_coding	Zfp266	ENSMUST00000174462	protein_coding	principal1	9	-1	20521417	6283
ENSMUSG00000002100	protein_coding	Mybpc3	ENSMUST00000111430	protein_coding	alternative2	2	1	91118144	4154
ENSMUSG00000048495	protein_coding	Tyw5	ENSMUST00000097732	retained_intron		1	-1	57406471	1754
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000231424	nonsense_mediated_decay		16	-1	17530791	895
ENSMUSG00000037034	protein_coding	Pax1	ENSMUST00000109968	protein_coding	principal1	2	1	147364994	2643
ENSMUSG00000060510	protein_coding	Zfp266	ENSMUST00000215908	protein_coding		9	-1	20521266	894
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000231676	retained_intron		16	-1	17530681	849
ENSMUSG00000037206	protein_coding	Islr	ENSMUST00000041477	protein_coding	principal1	9	-1	58159221	2223
ENSMUSG00000058729	protein_coding	Lin9	ENSMUST00000192561	protein_coding	principal1	1	1	180641150	3160
ENSMUSG00000032057	protein_coding	4833427G06Rik	ENSMUST00000170947	protein_coding	principal1	9	-1	51102078	973
ENSMUSG00000060510	protein_coding	Zfp266	ENSMUST00000213418	protein_coding		9	-1	20521417	485
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000231699	retained_intron		16	-1	17529148	454
ENSMUSG00000047832	protein_coding	Cdca4	ENSMUST00000062092	protein_coding	principal1	12	-1	112829389	2425
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000109632	protein_coding		2	-1	155930043	2313
ENSMUSG00000060510	protein_coding	Zfp266	ENSMUST00000217488	processed_transcript		9	-1	20521417	368
ENSMUSG00000002100	protein_coding	Mybpc3	ENSMUST00000169776	protein_coding	principal2	2	1	91118144	4163
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000017572	protein_coding	principal1	11	1	80428625	2848
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000231288	protein_coding		16	-1	17531055	734
ENSMUSG00000037034	protein_coding	Pax1	ENSMUST00000156584	retained_intron		2	1	147368282	1457
ENSMUSG00000058729	protein_coding	Lin9	ENSMUST00000192725	protein_coding		1	1	180641334	2878
ENSMUSG00000036251	protein_coding	Trpm8	ENSMUST00000148138	processed_transcript		1	1	88277661	567
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000231446	processed_transcript		16	-1	17531038	705
ENSMUSG00000060510	protein_coding	Zfp266	ENSMUST00000213275	processed_transcript		9	-1	20521410	679
ENSMUSG00000086907	lincRNA	Gm15298	ENSMUST00000145916	lincRNA		X	-1	141902455	1212
ENSMUSG00000047832	protein_coding	Cdca4	ENSMUST00000220899	protein_coding	principal1	12	-1	112829423	1994
ENSMUSG00000111799	unprocessed_pseudogene	Olfr928-ps1	ENSMUST00000213313	unprocessed_pseudogene		9	1	38895580	237
ENSMUSG00000037206	protein_coding	Islr	ENSMUST00000168864	protein_coding	principal1	9	-1	58158545	2076
ENSMUSG00000022760	protein_coding	Thap7	ENSMUST00000231623	retained_intron		16	-1	17530656	500
ENSMUSG00000060510	protein_coding	Zfp266	ENSMUST00000068296	protein_coding	principal1	9	-1	20521408	2266
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000072889	protein_coding	principal3	13	-1	24280795	4988
ENSMUSG00000047832	protein_coding	Cdca4	ENSMUST00000223432	retained_intron		12	-1	112829374	2265
ENSMUSG00000080775	processed_pseudogene	Gm6368	ENSMUST00000119727	processed_pseudogene		X	1	141980175	2147
ENSMUSG00000029650	protein_coding	Slc46a3	ENSMUST00000118527	protein_coding	principal1	5	-1	147894815	2210
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000043227	protein_coding	principal1	14	1	59201228	3903
ENSMUSG00000021807	protein_coding	Rtraf	ENSMUST00000022341	protein_coding	principal1	14	-1	19823824	1562
ENSMUSG00000037206	protein_coding	Islr	ENSMUST00000217578	protein_coding		9	-1	58204306	802
ENSMUSG00000082326	processed_pseudogene	Gm14366	ENSMUST00000121970	processed_pseudogene		X	-1	5610867	730
ENSMUSG00000082291	processed_pseudogene	Gm5762	ENSMUST00000119204	processed_pseudogene		X	-1	142023603	258
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000110398	protein_coding	alternative2	13	-1	24280716	4520
ENSMUSG00000114878	processed_pseudogene	Gm9086	ENSMUST00000224558	processed_pseudogene		14	1	65207119	613
ENSMUSG00000082270	processed_pseudogene	Gm14375	ENSMUST00000119490	processed_pseudogene		X	1	5665372	855
ENSMUSG00000021807	protein_coding	Rtraf	ENSMUST00000225615	processed_transcript		14	-1	19823055	500
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000191268	protein_coding	principal1	9	1	105643030	4756
ENSMUSG00000026469	protein_coding	Xpr1	ENSMUST00000027741	protein_coding	principal1	1	-1	155417329	7492
ENSMUSG00000098075	antisense	Gm26994	ENSMUST00000182027	antisense		8	-1	112569575	1571
ENSMUSG00000048495	protein_coding	Tyw5	ENSMUST00000079998	nonsense_mediated_decay		1	-1	57406674	1398
ENSMUSG00000029650	protein_coding	Slc46a3	ENSMUST00000031655	protein_coding	principal1	5	-1	147894815	2434
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000147261	processed_transcript		13	-1	24059319	645
ENSMUSG00000085761	antisense	4930455G09Rik	ENSMUST00000126231	antisense		4	1	142017898	630
ENSMUSG00000048495	protein_coding	Tyw5	ENSMUST00000162663	processed_transcript		1	-1	57390771	478
ENSMUSG00000026469	protein_coding	Xpr1	ENSMUST00000111775	protein_coding		1	-1	155417407	4094
ENSMUSG00000048495	protein_coding	Tyw5	ENSMUST00000161727	retained_intron		1	-1	57393698	866
ENSMUSG00000029650	protein_coding	Slc46a3	ENSMUST00000152064	retained_intron		5	-1	147879869	833
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000065778	protein_coding	principal1	9	1	105643170	4711
ENSMUSG00000048495	protein_coding	Tyw5	ENSMUST00000160837	protein_coding		1	-1	57406443	766
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000163200	protein_coding		9	-1	58201715	4123
ENSMUSG00000026469	protein_coding	Xpr1	ENSMUST00000139925	retained_intron		1	-1	155309642	2443
ENSMUSG00000029650	protein_coding	Slc46a3	ENSMUST00000138244	protein_coding		5	-1	147894815	388
ENSMUSG00000048495	protein_coding	Tyw5	ENSMUST00000161092	retained_intron		1	-1	57391740	476
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000188784	protein_coding		9	1	105643201	1295
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000142171	retained_intron		13	-1	24099635	2350
ENSMUSG00000073728	antisense	Tmem51os1	ENSMUST00000153023	antisense		4	1	142083972	3440
ENSMUSG00000026469	protein_coding	Xpr1	ENSMUST00000111774	protein_coding		1	-1	155417415	2753
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000128416	processed_transcript		13	-1	24112822	215
ENSMUSG00000026469	protein_coding	Xpr1	ENSMUST00000192359	retained_intron		1	-1	155292027	2738
ENSMUSG00000085565	lincRNA	Gm15721	ENSMUST00000138406	lincRNA		5	-1	147957166	3308
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000186943	protein_coding		9	1	105658389	770
ENSMUSG00000026627	protein_coding	Pacc1	ENSMUST00000027940	protein_coding	principal1	1	1	191325912	2246
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000188385	retained_intron		9	1	105661163	634
ENSMUSG00000073728	antisense	Tmem51os1	ENSMUST00000141769	antisense		4	1	142084298	2131
ENSMUSG00000095814	protein_coding	Btbd35f7	ENSMUST00000105007	protein_coding	principal1	X	1	5669067	1960
ENSMUSG00000053907	protein_coding	Mat2a	ENSMUST00000205335	protein_coding		6	-1	72439556	3387
ENSMUSG00000026469	protein_coding	Xpr1	ENSMUST00000129271	retained_intron		1	-1	155417395	4246
ENSMUSG00000048495	protein_coding	Tyw5	ENSMUST00000163039	processed_transcript		1	-1	57401522	454
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000174009	nonsense_mediated_decay		14	1	59201234	2163
ENSMUSG00000026469	protein_coding	Xpr1	ENSMUST00000143529	processed_transcript		1	-1	155384662	2881
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000189691	retained_intron		9	1	105681710	969
ENSMUSG00000073728	antisense	Tmem51os1	ENSMUST00000150202	antisense		4	1	142084340	1667
ENSMUSG00000032571	protein_coding	Pik3r4	ENSMUST00000214254	retained_intron		9	1	105681793	1358
ENSMUSG00000048495	protein_coding	Tyw5	ENSMUST00000160118	nonsense_mediated_decay		1	-1	57406471	695
ENSMUSG00000040843	protein_coding	Tiprl	ENSMUST00000043235	protein_coding	principal1	1	-1	165236943	4380
ENSMUSG00000027298	protein_coding	Tyro3	ENSMUST00000110783	protein_coding	alternative2	2	1	119797733	4460
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000022551	protein_coding	principal1	14	1	59201242	3957
ENSMUSG00000104333	TEC	Gm10253	ENSMUST00000194270	TEC		3	-1	88739692	940
ENSMUSG00000073728	antisense	Tmem51os1	ENSMUST00000139653	antisense		4	1	142084856	675
ENSMUSG00000100002	lincRNA	Gm29642	ENSMUST00000186170	lincRNA		9	1	25152114	921
ENSMUSG00000040843	protein_coding	Tiprl	ENSMUST00000192726	retained_intron		1	-1	165216527	946
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000109636	protein_coding	principal1	2	-1	155930310	2633
ENSMUSG00000007989	protein_coding	Fzd3	ENSMUST00000131309	protein_coding	principal1	14	-1	65262463	12734
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000147898	retained_intron		11	1	80428644	2342
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000140136	protein_coding		14	1	59201476	421
ENSMUSG00000085574	sense_intronic	Gm13053	ENSMUST00000128385	sense_intronic		4	-1	142048578	459
ENSMUSG00000100287	lincRNA	Gm28068	ENSMUST00000190861	lincRNA		15	1	75007303	3503
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000152766	protein_coding		2	-1	155930018	1234
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000172615	nonsense_mediated_decay		11	1	80428646	581
ENSMUSG00000048495	protein_coding	Tyw5	ENSMUST00000161780	retained_intron		1	-1	57406537	708
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000172773	nonsense_mediated_decay		11	1	80428665	609
ENSMUSG00000101082	unprocessed_pseudogene	Gm28069	ENSMUST00000189926	unprocessed_pseudogene		15	1	75025294	214
ENSMUSG00000040843	protein_coding	Tiprl	ENSMUST00000192436	nonsense_mediated_decay		1	-1	165236996	1103
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000095778	processed_transcript		14	1	59201483	1499
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000161484	processed_transcript		2	-1	155851692	480
ENSMUSG00000053907	protein_coding	Mat2a	ENSMUST00000059472	protein_coding	principal1	6	-1	72439558	2804
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000006036	protein_coding		2	-1	155930044	808
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000109631	protein_coding		2	-1	155930310	1091
ENSMUSG00000040843	protein_coding	Tiprl	ENSMUST00000142191	processed_transcript		1	-1	165236922	689
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000125420	retained_intron		13	-1	24280790	2501
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000139232	protein_coding		2	-1	155930032	730
ENSMUSG00000111459	processed_pseudogene	Gm8031	ENSMUST00000213430	processed_pseudogene		9	-1	25229069	626
ENSMUSG00000038168	protein_coding	P3h2	ENSMUST00000039990	protein_coding	principal1	16	-1	26105784	3283
ENSMUSG00000040843	protein_coding	Tiprl	ENSMUST00000195248	protein_coding		1	-1	165236513	416
ENSMUSG00000053907	protein_coding	Mat2a	ENSMUST00000205823	protein_coding		6	-1	72434991	590
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000144159	processed_transcript		13	-1	24155209	394
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000142326	protein_coding		14	1	59201503	447
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000173186	nonsense_mediated_decay		11	1	80428686	493
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000140042	protein_coding		13	-1	24280486	580
ENSMUSG00000053907	protein_coding	Mat2a	ENSMUST00000206904	nonsense_mediated_decay		6	-1	72435076	673
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000172810	nonsense_mediated_decay		14	1	59205613	899
ENSMUSG00000040616	protein_coding	Tmem51	ENSMUST00000036572	protein_coding	principal1	4	-1	142084304	1875
ENSMUSG00000040843	protein_coding	Tiprl	ENSMUST00000156102	processed_transcript		1	-1	165236932	345
ENSMUSG00000053907	protein_coding	Mat2a	ENSMUST00000206692	protein_coding		6	-1	72439556	1400
ENSMUSG00000053907	protein_coding	Mat2a	ENSMUST00000205384	protein_coding		6	-1	72439388	576
ENSMUSG00000007989	protein_coding	Fzd3	ENSMUST00000127272	processed_transcript		14	-1	65228096	426
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000153225	processed_transcript		14	1	59216437	754
ENSMUSG00000038168	protein_coding	P3h2	ENSMUST00000160067	retained_intron		16	-1	25985174	593
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000174743	nonsense_mediated_decay		11	1	80428686	847
ENSMUSG00000117560	lincRNA	Gm31759	ENSMUST00000234897	lincRNA		17	-1	74950301	2128
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000123076	protein_coding		13	-1	24206293	428
ENSMUSG00000102302	sense_intronic	Gm38190	ENSMUST00000192350	sense_intronic		1	-1	165235125	4755
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000174830	protein_coding		14	1	59217605	852
ENSMUSG00000053907	protein_coding	Mat2a	ENSMUST00000206368	retained_intron		6	-1	72439540	762
ENSMUSG00000038168	protein_coding	P3h2	ENSMUST00000161878	processed_transcript		16	-1	25992791	382
ENSMUSG00000117342	processed_transcript	Gm31818	ENSMUST00000235100	lincRNA		17	1	74950391	258
ENSMUSG00000038168	protein_coding	P3h2	ENSMUST00000159161	processed_transcript		16	-1	26014593	349
ENSMUSG00000117342	processed_transcript	Gm31818	ENSMUST00000234418	lincRNA		17	1	74954662	373
ENSMUSG00000021338	protein_coding	Carmil1	ENSMUST00000136517	processed_transcript		13	-1	24240544	311
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000191088	processed_transcript		1	1	59684971	576
ENSMUSG00000035469	protein_coding	Rcbtb1	ENSMUST00000147280	retained_intron		14	1	59222588	765
ENSMUSG00000053441	protein_coding	Adamts19	ENSMUST00000052907	protein_coding	principal1	18	1	58836667	5145
ENSMUSG00000081707	processed_pseudogene	Gm11343	ENSMUST00000120579	processed_pseudogene		13	1	24195897	599
ENSMUSG00000053907	protein_coding	Mat2a	ENSMUST00000206962	retained_intron		6	-1	72439543	646
ENSMUSG00000117342	processed_transcript	Gm31818	ENSMUST00000234138	retained_intron		17	1	74954990	338
ENSMUSG00000112324	lincRNA	Gm47939	ENSMUST00000219283	lincRNA		10	1	25899279	2661
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000172847	nonsense_mediated_decay		11	1	80428686	655
ENSMUSG00000090203	sense_intronic	AU015336	ENSMUST00000159040	sense_intronic		16	-1	26041268	861
ENSMUSG00000053907	protein_coding	Mat2a	ENSMUST00000206900	processed_transcript		6	-1	72439548	305
ENSMUSG00000053907	protein_coding	Mat2a	ENSMUST00000206783	retained_intron		6	-1	72439556	755
ENSMUSG00000053441	protein_coding	Adamts19	ENSMUST00000236901	retained_intron		18	1	58837317	4489
ENSMUSG00000006818	protein_coding	Sod2	ENSMUST00000233451	protein_coding		17	1	13006846	451
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000173060	nonsense_mediated_decay		11	1	80428690	717
ENSMUSG00000090257	antisense	Gm4524	ENSMUST00000161614	antisense		16	1	25956475	2152
ENSMUSG00000108591	TEC	Particl	ENSMUST00000205370	TEC		6	1	72439051	1560
ENSMUSG00000027298	protein_coding	Tyro3	ENSMUST00000147636	processed_transcript		2	1	119799239	643
ENSMUSG00000051611	protein_coding	Olfr112	ENSMUST00000213274	protein_coding	principal1	17	-1	37567094	3558
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000150915	processed_transcript		4	1	106910701	621
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000173565	protein_coding		11	1	80429887	600
ENSMUSG00000027298	protein_coding	Tyro3	ENSMUST00000148343	processed_transcript		2	1	119799327	470
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000148895	protein_coding		11	1	80456368	796
ENSMUSG00000051611	protein_coding	Olfr112	ENSMUST00000173676	processed_transcript		17	-1	37564218	418
ENSMUSG00000051582	protein_coding	Otud6a	ENSMUST00000060241	protein_coding	principal1	X	1	100429013	873
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000129500	protein_coding		11	1	80460709	597
ENSMUSG00000032194	protein_coding	Kank2	ENSMUST00000034717	protein_coding	principal1	9	-1	21798744	5040
ENSMUSG00000053441	protein_coding	Adamts19	ENSMUST00000237964	retained_intron		18	1	58967408	4124
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000173797	protein_coding		11	1	80462611	637
ENSMUSG00000027298	protein_coding	Tyro3	ENSMUST00000028763	protein_coding	principal3	2	1	119799514	3989
ENSMUSG00000053441	protein_coding	Adamts19	ENSMUST00000237536	retained_intron		18	1	58983844	4390
ENSMUSG00000022311	protein_coding	Csmd3	ENSMUST00000160658	protein_coding		15	-1	48791933	12460
ENSMUSG00000051611	protein_coding	Olfr112	ENSMUST00000208832	protein_coding	principal1	17	-1	37569449	3173
ENSMUSG00000035476	protein_coding	Tab3	ENSMUST00000146063	protein_coding		X	1	85574150	385
ENSMUSG00000032194	protein_coding	Kank2	ENSMUST00000216008	nonsense_mediated_decay		9	-1	21798503	3433
ENSMUSG00000027298	protein_coding	Tyro3	ENSMUST00000135726	processed_transcript		2	1	119801116	480
ENSMUSG00000051611	protein_coding	Olfr112	ENSMUST00000174798	protein_coding		17	-1	37569451	1501
ENSMUSG00000017428	protein_coding	Psmd11	ENSMUST00000125591	nonsense_mediated_decay		11	1	80462615	627
ENSMUSG00000032194	protein_coding	Kank2	ENSMUST00000213691	protein_coding		9	-1	21798526	399
ENSMUSG00000027298	protein_coding	Tyro3	ENSMUST00000130456	retained_intron		2	1	119803087	683
ENSMUSG00000051611	protein_coding	Olfr112	ENSMUST00000085548	protein_coding	principal1	17	-1	37567094	3103
ENSMUSG00000021908	processed_pseudogene	Ncoa4-ps	ENSMUST00000022467	processed_pseudogene		12	1	119260978	1878
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000123790	retained_intron		2	-1	155930263	1436
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000133726	nonsense_mediated_decay		2	-1	155930043	679
ENSMUSG00000025971	protein_coding	Maip1	ENSMUST00000027114	protein_coding	principal1	1	1	57406328	3540
ENSMUSG00000111708	unprocessed_pseudogene	Olfr929-ps1	ENSMUST00000216338	unprocessed_pseudogene		9	-1	38907847	585
ENSMUSG00000031808	protein_coding	Slc27a1	ENSMUST00000212889	protein_coding	principal1	8	1	71568882	2730
ENSMUSG00000063221	protein_coding	Olfr930	ENSMUST00000217208	protein_coding	principal1	9	1	38929809	1313
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000141501	retained_intron		2	-1	155930050	757
ENSMUSG00000027298	protein_coding	Tyro3	ENSMUST00000147761	retained_intron		2	1	119809208	3529
ENSMUSG00000025971	protein_coding	Maip1	ENSMUST00000185709	retained_intron		1	1	57406759	4874
ENSMUSG00000111293	antisense	Gm34006	ENSMUST00000217505	antisense		10	-1	42864240	1465
ENSMUSG00000031808	protein_coding	Slc27a1	ENSMUST00000212989	processed_transcript		8	1	71568906	432
ENSMUSG00000022311	protein_coding	Csmd3	ENSMUST00000162830	protein_coding	principal1	15	-1	48792063	13012
ENSMUSG00000027298	protein_coding	Tyro3	ENSMUST00000137135	retained_intron		2	1	119810846	521
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000146995	processed_transcript		2	-1	155930056	630
ENSMUSG00000092197	processed_pseudogene	Gm20480	ENSMUST00000173953	processed_pseudogene		7	-1	86298893	250
ENSMUSG00000111293	antisense	Gm34006	ENSMUST00000216467	antisense		10	-1	42864681	1918
ENSMUSG00000063221	protein_coding	Olfr930	ENSMUST00000058789	protein_coding	principal1	9	1	38930089	1101
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000159238	protein_coding		2	-1	155930060	159
ENSMUSG00000117131	bidirectional_promoter_lncRNA	Gm41506	ENSMUST00000232740	bidirectional_promoter_lncRNA		17	-1	28530734	961
ENSMUSG00000107921	processed_pseudogene	Gm6423	ENSMUST00000204315	processed_pseudogene		6	1	124251531	934
ENSMUSG00000022311	protein_coding	Csmd3	ENSMUST00000161653	protein_coding		15	-1	48001621	9120
ENSMUSG00000111293	antisense	Gm34006	ENSMUST00000213985	antisense		10	-1	42864699	655
ENSMUSG00000111333	processed_pseudogene	Gm48670	ENSMUST00000217454	processed_pseudogene		10	1	42886892	574
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000162258	retained_intron		2	-1	155910604	478
ENSMUSG00000026626	protein_coding	Ppp2r5a	ENSMUST00000067976	protein_coding	principal1	1	-1	191397041	3088
ENSMUSG00000116786	lincRNA	4930570E03Rik	ENSMUST00000231496	lincRNA		16	1	78695034	2211
ENSMUSG00000107773	lincRNA	Gm43971	ENSMUST00000205010	lincRNA		6	1	124279485	743
ENSMUSG00000074797	protein_coding	Itpa	ENSMUST00000103193	protein_coding	principal1	2	1	130667610	1390
ENSMUSG00000092292	protein_coding	Olfr113	ENSMUST00000216181	protein_coding	principal1	17	-1	37577663	1671
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000162749	processed_transcript		2	-1	155930276	624
ENSMUSG00000116730	TEC	4930403O18Rik	ENSMUST00000232014	TEC		16	1	78757733	1252
ENSMUSG00000022311	protein_coding	Csmd3	ENSMUST00000162006	retained_intron		15	-1	47615201	2951
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000155680	retained_intron		2	-1	155930046	3067
ENSMUSG00000105664	lincRNA	Gm42797	ENSMUST00000197573	lincRNA		5	-1	113930134	494
ENSMUSG00000026626	protein_coding	Ppp2r5a	ENSMUST00000191920	retained_intron		1	-1	191356465	240
ENSMUSG00000031808	protein_coding	Slc27a1	ENSMUST00000034267	protein_coding	principal1	8	1	71568927	2795
ENSMUSG00000022311	protein_coding	Csmd3	ENSMUST00000161173	retained_intron		15	-1	47634293	801
ENSMUSG00000023034	protein_coding	Nr4a1	ENSMUST00000228985	protein_coding	principal1	15	1	101254269	2553
ENSMUSG00000005882	protein_coding	Uqcc1	ENSMUST00000142655	protein_coding		2	-1	155930050	487
ENSMUSG00000021750	protein_coding	Fam107a	ENSMUST00000121887	protein_coding	principal2	14	-1	8309777	3333
ENSMUSG00000022311	protein_coding	Csmd3	ENSMUST00000110261	retained_intron		15	-1	47961468	865
ENSMUSG00000031808	protein_coding	Slc27a1	ENSMUST00000212225	processed_transcript		8	1	71569679	415
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000215950	protein_coding	principal1	9	-1	58202285	4109
ENSMUSG00000031808	protein_coding	Slc27a1	ENSMUST00000212111	protein_coding		8	1	71569748	641
ENSMUSG00000059371	protein_coding	Olfr427	ENSMUST00000213832	protein_coding	principal1	1	1	174096891	3866
ENSMUSG00000026626	protein_coding	Ppp2r5a	ENSMUST00000195605	processed_transcript		1	-1	191385326	779
ENSMUSG00000021750	protein_coding	Fam107a	ENSMUST00000036070	protein_coding	principal2	14	-1	8309779	3151
ENSMUSG00000070332	protein_coding	Trim80	ENSMUST00000093914	protein_coding	principal1	11	1	115440545	1934
ENSMUSG00000031808	protein_coding	Slc27a1	ENSMUST00000213100	protein_coding		8	1	71570172	384
ENSMUSG00000054054	protein_coding	Olfr309	ENSMUST00000174158	protein_coding	principal1	7	-1	86313708	3293
ENSMUSG00000059371	protein_coding	Olfr427	ENSMUST00000080831	protein_coding	principal1	1	1	174099460	948
ENSMUSG00000026626	protein_coding	Ppp2r5a	ENSMUST00000191925	nonsense_mediated_decay		1	-1	191368725	429
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000214647	protein_coding		9	-1	58201799	875
ENSMUSG00000054054	protein_coding	Olfr309	ENSMUST00000055690	protein_coding	principal1	7	-1	86307111	927
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000217050	protein_coding		9	-1	58200572	848
ENSMUSG00000026626	protein_coding	Ppp2r5a	ENSMUST00000192334	retained_intron		1	-1	191368714	706
ENSMUSG00000030532	protein_coding	Hddc3	ENSMUST00000032747	protein_coding	principal1	7	1	80343104	1510
ENSMUSG00000026421	protein_coding	Csrp1	ENSMUST00000097561	protein_coding	principal1	1	1	135720061	1828
ENSMUSG00000031808	protein_coding	Slc27a1	ENSMUST00000211886	retained_intron		8	1	71570655	2809
ENSMUSG00000006818	protein_coding	Sod2	ENSMUST00000007012	protein_coding	principal1	17	1	13007817	5861
ENSMUSG00000023034	protein_coding	Nr4a1	ENSMUST00000230814	protein_coding		15	1	101266846	344
ENSMUSG00000023034	protein_coding	Nr4a1	ENSMUST00000023779	protein_coding	principal1	15	1	101266846	2477
ENSMUSG00000026626	protein_coding	Ppp2r5a	ENSMUST00000195859	processed_transcript		1	-1	191399299	297
ENSMUSG00000021750	protein_coding	Fam107a	ENSMUST00000120411	protein_coding	alternative1	14	-1	8318023	2093
ENSMUSG00000030532	protein_coding	Hddc3	ENSMUST00000206480	protein_coding		7	1	80343116	454
ENSMUSG00000050493	protein_coding	Fam167b	ENSMUST00000142699	processed_transcript		4	-1	129577457	527
ENSMUSG00000026626	protein_coding	Ppp2r5a	ENSMUST00000194953	retained_intron		1	-1	191396319	3541
ENSMUSG00000030532	protein_coding	Hddc3	ENSMUST00000206074	protein_coding		7	1	80343121	565
ENSMUSG00000023034	protein_coding	Nr4a1	ENSMUST00000231153	retained_intron		15	1	101272861	893
ENSMUSG00000026626	protein_coding	Ppp2r5a	ENSMUST00000194832	retained_intron		1	-1	191403272	2421
ENSMUSG00000022311	protein_coding	Csmd3	ENSMUST00000160716	processed_transcript		15	-1	48791989	1876
ENSMUSG00000026421	protein_coding	Csrp1	ENSMUST00000027677	protein_coding	principal1	1	1	135729147	1823
ENSMUSG00000030532	protein_coding	Hddc3	ENSMUST00000205744	nonsense_mediated_decay		7	1	80343124	1471
ENSMUSG00000021750	protein_coding	Fam107a	ENSMUST00000137133	protein_coding		14	-1	8309795	460
ENSMUSG00000022311	protein_coding	Csmd3	ENSMUST00000160655	retained_intron		15	-1	48791989	3155
ENSMUSG00000030532	protein_coding	Hddc3	ENSMUST00000206122	protein_coding		7	1	80343132	696
ENSMUSG00000006818	protein_coding	Sod2	ENSMUST00000233791	retained_intron		17	1	13007859	584
ENSMUSG00000111661	processed_pseudogene	Gm46142	ENSMUST00000213332	processed_pseudogene		9	1	20555329	481
ENSMUSG00000074797	protein_coding	Itpa	ENSMUST00000126714	processed_transcript		2	1	130667865	479
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000216297	protein_coding		9	-1	58202243	1045
ENSMUSG00000074797	protein_coding	Itpa	ENSMUST00000138963	retained_intron		2	1	130667826	374
ENSMUSG00000006818	protein_coding	Sod2	ENSMUST00000233333	retained_intron		17	1	13007860	644
ENSMUSG00000081232	processed_pseudogene	Gm14373	ENSMUST00000122467	processed_pseudogene		X	-1	5701884	2158
ENSMUSG00000031808	protein_coding	Slc27a1	ENSMUST00000212211	retained_intron		8	1	71579213	3207
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000217427	protein_coding		9	-1	58202534	818
ENSMUSG00000074797	protein_coding	Itpa	ENSMUST00000133328	processed_transcript		2	1	130667808	656
ENSMUSG00000081486	processed_pseudogene	Gm14452	ENSMUST00000118680	processed_pseudogene		X	1	5859717	1632
ENSMUSG00000031808	protein_coding	Slc27a1	ENSMUST00000211811	retained_intron		8	1	71580516	2484
ENSMUSG00000006818	protein_coding	Sod2	ENSMUST00000232726	nonsense_mediated_decay		17	1	13007996	4057
ENSMUSG00000022311	protein_coding	Csmd3	ENSMUST00000100670	protein_coding	principal1	15	-1	48791989	13022
ENSMUSG00000050493	protein_coding	Fam167b	ENSMUST00000052835	protein_coding	principal1	4	-1	129578549	913
ENSMUSG00000030532	protein_coding	Hddc3	ENSMUST00000205531	nonsense_mediated_decay		7	1	80343144	772
ENSMUSG00000006818	protein_coding	Sod2	ENSMUST00000233897	processed_transcript		17	1	13008184	1138
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000214649	protein_coding		9	-1	58204319	603
ENSMUSG00000035476	protein_coding	Tab3	ENSMUST00000048250	protein_coding	principal1	X	1	85574022	6364
ENSMUSG00000083939	processed_pseudogene	Gm14451	ENSMUST00000121581	processed_pseudogene		X	-1	5871506	1542
ENSMUSG00000006818	protein_coding	Sod2	ENSMUST00000233278	retained_intron		17	1	13010340	334
ENSMUSG00000030532	protein_coding	Hddc3	ENSMUST00000205768	nonsense_mediated_decay		7	1	80343566	561
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000216231	protein_coding		9	-1	58202344	738
ENSMUSG00000050014	protein_coding	Apol10b	ENSMUST00000089465	protein_coding	principal1	15	-1	77596125	2325
ENSMUSG00000074797	protein_coding	Itpa	ENSMUST00000156382	retained_intron		2	1	130667805	747
ENSMUSG00000030532	protein_coding	Hddc3	ENSMUST00000206559	nonsense_mediated_decay		7	1	80343566	425
ENSMUSG00000006818	protein_coding	Sod2	ENSMUST00000233922	retained_intron		17	1	13034976	804
ENSMUSG00000037204	protein_coding	Atg101	ENSMUST00000048393	protein_coding	principal1	15	1	101284272	1270
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000216359	processed_transcript		9	-1	58201568	771
ENSMUSG00000030532	protein_coding	Hddc3	ENSMUST00000205448	protein_coding		7	1	80343766	885
ENSMUSG00000035476	protein_coding	Tab3	ENSMUST00000137438	protein_coding		X	1	85574034	707
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000217512	protein_coding		9	-1	58202951	673
ENSMUSG00000030532	protein_coding	Hddc3	ENSMUST00000206089	protein_coding		7	1	80343779	605
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000213349	processed_transcript		9	-1	58202714	315
ENSMUSG00000035476	protein_coding	Tab3	ENSMUST00000152880	processed_transcript		X	1	85574039	360
ENSMUSG00000037204	protein_coding	Atg101	ENSMUST00000229525	protein_coding		15	1	101286607	523
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000213495	retained_intron		9	-1	58202186	769
ENSMUSG00000037204	protein_coding	Atg101	ENSMUST00000230525	protein_coding		15	1	101286733	605
ENSMUSG00000058729	protein_coding	Lin9	ENSMUST00000085804	retained_intron		1	1	180641353	1660
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000217158	retained_intron		9	-1	58204279	431
ENSMUSG00000073535	lincRNA	Gm5532	ENSMUST00000097531	lincRNA		1	-1	155527111	1751
ENSMUSG00000058729	protein_coding	Lin9	ENSMUST00000194373	processed_transcript		1	1	180641355	708
ENSMUSG00000073535	lincRNA	Gm5532	ENSMUST00000194133	lincRNA		1	-1	155527143	541
ENSMUSG00000109868	lincRNA	Gm39244	ENSMUST00000209663	lincRNA		8	-1	108537126	1940
ENSMUSG00000109868	lincRNA	Gm39244	ENSMUST00000210837	lincRNA		8	-1	108536947	1857
ENSMUSG00000109868	lincRNA	Gm39244	ENSMUST00000211262	lincRNA		8	-1	108537221	836
ENSMUSG00000032243	protein_coding	Itga11	ENSMUST00000034774	protein_coding	principal1	9	1	62677826	4969
ENSMUSG00000104292	TEC	Gm38042	ENSMUST00000191614	TEC		8	1	108737593	5208
ENSMUSG00000075408	protein_coding	Smim41	ENSMUST00000191426	protein_coding	principal5	15	1	101293232	1947
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000114144	protein_coding	principal1	9	-1	58204319	3880
ENSMUSG00000022949	protein_coding	Clic6	ENSMUST00000162181	protein_coding		16	1	92485736	376
ENSMUSG00000075408	protein_coding	Smim41	ENSMUST00000071328	protein_coding	alternative2	15	1	101293212	1155
ENSMUSG00000031220	protein_coding	Awat2	ENSMUST00000033567	protein_coding	principal1	X	-1	100412587	1619
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000170421	protein_coding	principal1	9	-1	58202534	4071
ENSMUSG00000058729	protein_coding	Lin9	ENSMUST00000193892	nonsense_mediated_decay		1	1	180641360	2948
ENSMUSG00000048581	protein_coding	E130311K13Rik	ENSMUST00000061706	protein_coding	principal1	3	-1	63929472	1640
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000163897	protein_coding	principal1	9	-1	58202285	4303
ENSMUSG00000058729	protein_coding	Lin9	ENSMUST00000191744	retained_intron		1	1	180641366	2017
ENSMUSG00000051243	protein_coding	Islr2	ENSMUST00000165276	protein_coding	principal1	9	-1	58201799	3989
ENSMUSG00000058729	protein_coding	Lin9	ENSMUST00000194638	nonsense_mediated_decay		1	1	180661477	644
ENSMUSG00000031220	protein_coding	Awat2	ENSMUST00000147103	protein_coding		X	-1	100442717	1984
ENSMUSG00000110969	TEC	Gm47174	ENSMUST00000215092	TEC		9	-1	58192192	148
ENSMUSG00000048581	protein_coding	E130311K13Rik	ENSMUST00000162448	processed_transcript		3	-1	63929391	654
ENSMUSG00000058729	protein_coding	Lin9	ENSMUST00000193162	retained_intron		1	1	180679460	2551
ENSMUSG00000048581	protein_coding	E130311K13Rik	ENSMUST00000160983	retained_intron		3	-1	63929391	642
ENSMUSG00000057818	transcribed_processed_pseudogene	1600029O15Rik	ENSMUST00000179787	processed_transcript		9	1	58202897	1809
ENSMUSG00000058729	protein_coding	Lin9	ENSMUST00000194847	retained_intron		1	1	180680887	2037
ENSMUSG00000057818	transcribed_processed_pseudogene	1600029O15Rik	ENSMUST00000178259	transcribed_processed_pseudogene		9	1	58208038	517
ENSMUSG00000083768	processed_pseudogene	Gm15362	ENSMUST00000121459	processed_pseudogene		X	1	74504015	388
ENSMUSG00000115693	antisense	1700085D07Rik	ENSMUST00000228696	antisense		15	1	73249546	318
ENSMUSG00000115602	processed_pseudogene	Gm7908	ENSMUST00000228413	processed_pseudogene		15	-1	73408239	751
ENSMUSG00000082447	processed_pseudogene	Gm15364	ENSMUST00000119618	processed_pseudogene		X	1	74510946	585
ENSMUSG00000023943	protein_coding	Sult1c1	ENSMUST00000024738	protein_coding	principal1	17	-1	53990674	1556
ENSMUSG00000117704	TEC	Gm50273	ENSMUST00000235879	TEC		19	-1	53962769	2415
ENSMUSG00000078896	protein_coding	Zfp965	ENSMUST00000109042	protein_coding		2	1	175469985	1271
ENSMUSG00000022949	protein_coding	Clic6	ENSMUST00000023670	protein_coding	principal1	16	1	92498134	3758
ENSMUSG00000032243	protein_coding	Itga11	ENSMUST00000159012	retained_intron		9	1	62677860	3628
ENSMUSG00000085066	processed_pseudogene	Gm4989	ENSMUST00000118711	processed_pseudogene		X	1	74566958	749
ENSMUSG00000030397	protein_coding	Mark4	ENSMUST00000239292	protein_coding	alternative1	7	-1	19458821	3966
ENSMUSG00000051510	protein_coding	Mafg	ENSMUST00000058162	protein_coding	principal1	11	-1	120633600	4923
ENSMUSG00000043715	protein_coding	Olfr1326-ps1	ENSMUST00000059880	protein_coding	principal1	X	-1	74574888	3637
ENSMUSG00000083026	processed_pseudogene	Gm6373	ENSMUST00000121026	processed_pseudogene		X	1	142060855	360
ENSMUSG00000111537	processed_pseudogene	Gm7653	ENSMUST00000214567	processed_pseudogene		9	1	62789904	508
ENSMUSG00000078896	protein_coding	Zfp965	ENSMUST00000109002	protein_coding	principal1	2	1	175470063	957
ENSMUSG00000037434	protein_coding	Slc30a1	ENSMUST00000044954	protein_coding	principal1	1	1	191906767	5244
ENSMUSG00000051510	protein_coding	Mafg	ENSMUST00000106182	protein_coding	principal1	11	-1	120630797	1104
ENSMUSG00000078896	protein_coding	Zfp965	ENSMUST00000109043	protein_coding		2	1	175470063	417
ENSMUSG00000078896	protein_coding	Zfp965	ENSMUST00000143490	protein_coding		2	1	175470063	297
ENSMUSG00000030397	protein_coding	Mark4	ENSMUST00000085715	protein_coding	principal2	7	-1	19458821	3886
ENSMUSG00000051297	sense_overlapping	2410124H12Rik	ENSMUST00000160494	sense_overlapping		16	1	92478742	706
ENSMUSG00000051510	protein_coding	Mafg	ENSMUST00000106181	protein_coding	principal1	11	-1	120630636	840
ENSMUSG00000037434	protein_coding	Slc30a1	ENSMUST00000161756	protein_coding		1	1	191907256	677
ENSMUSG00000080186	processed_pseudogene	Gm14448	ENSMUST00000116383	processed_pseudogene		X	-1	5885952	210
ENSMUSG00000055833	antisense	1700034H15Rik	ENSMUST00000190327	antisense		1	-1	191900886	250
ENSMUSG00000024223	protein_coding	Armc12	ENSMUST00000233923	protein_coding	principal1	17	1	28530806	1293
ENSMUSG00000081661	processed_pseudogene	Gm14450	ENSMUST00000119984	processed_pseudogene		X	1	5984772	240
ENSMUSG00000094475	protein_coding	Gm11007	ENSMUST00000177700	protein_coding		2	1	175643978	195
ENSMUSG00000024223	protein_coding	Armc12	ENSMUST00000233837	protein_coding		17	1	28530857	1166
ENSMUSG00000051510	protein_coding	Mafg	ENSMUST00000106180	protein_coding	principal1	11	-1	120630148	732
ENSMUSG00000024223	protein_coding	Armc12	ENSMUST00000025060	protein_coding		17	1	28530857	1061
ENSMUSG00000024223	protein_coding	Armc12	ENSMUST00000232814	retained_intron		17	1	28530861	1304
ENSMUSG00000081219	processed_pseudogene	Bambi-ps1	ENSMUST00000121525	processed_pseudogene		2	-1	122467526	592
ENSMUSG00000051510	protein_coding	Mafg	ENSMUST00000128498	processed_transcript		11	-1	120633556	412
ENSMUSG00000094475	protein_coding	Gm11007	ENSMUST00000178120	protein_coding	principal1	2	1	175643978	1497
ENSMUSG00000024223	protein_coding	Armc12	ENSMUST00000233114	nonsense_mediated_decay		17	1	28530867	1213
ENSMUSG00000094475	protein_coding	Gm11007	ENSMUST00000185834	protein_coding		2	1	175651005	1494
ENSMUSG00000032244	protein_coding	Fem1b	ENSMUST00000034775	protein_coding	principal1	9	-1	62811934	6785
ENSMUSG00000115530	processed_pseudogene	Gm4266	ENSMUST00000226353	processed_pseudogene		14	1	73493093	832
ENSMUSG00000084852	unprocessed_pseudogene	Gm16359	ENSMUST00000124511	unprocessed_pseudogene		2	1	175674203	289
ENSMUSG00000036251	protein_coding	Trpm8	ENSMUST00000113114	protein_coding	principal1	1	1	88303283	4112
ENSMUSG00000068957	lincRNA	4930589L23Rik	ENSMUST00000091023	lincRNA		3	1	79568192	1364
ENSMUSG00000003283	protein_coding	Hck	ENSMUST00000109799	protein_coding	principal2	2	1	153108468	2092
ENSMUSG00000015441	protein_coding	Gzmf	ENSMUST00000022757	protein_coding	principal1	14	-1	56211417	919
ENSMUSG00000036251	protein_coding	Trpm8	ENSMUST00000040210	protein_coding	principal1	1	1	88306759	4146
ENSMUSG00000081056	processed_pseudogene	Gm13998	ENSMUST00000120952	processed_pseudogene		2	-1	119878403	335
ENSMUSG00000030898	protein_coding	Cckbr	ENSMUST00000033189	protein_coding	principal1	7	1	105425731	2573
ENSMUSG00000103564	processed_pseudogene	Gm35067	ENSMUST00000194355	processed_pseudogene		3	1	79582588	647
ENSMUSG00000038872	protein_coding	Zfhx3	ENSMUST00000220518	protein_coding	principal1	8	1	107942644	17152
ENSMUSG00000055833	antisense	1700034H15Rik	ENSMUST00000154116	antisense		1	-1	191899129	926
ENSMUSG00000114303	antisense	Gm4022	ENSMUST00000223614	antisense		14	1	56173751	1613
ENSMUSG00000038872	protein_coding	Zfhx3	ENSMUST00000212094	processed_transcript		8	1	107994555	834
ENSMUSG00000114806	processed_pseudogene	Gm8963	ENSMUST00000223969	processed_pseudogene		14	1	56181827	681
ENSMUSG00000036251	protein_coding	Trpm8	ENSMUST00000171176	protein_coding	principal1	1	1	88318913	3723
ENSMUSG00000038872	protein_coding	Zfhx3	ENSMUST00000221632	processed_transcript		8	1	107994559	1296
ENSMUSG00000055833	antisense	1700034H15Rik	ENSMUST00000140401	antisense		1	-1	191899256	728
ENSMUSG00000055833	antisense	1700034H15Rik	ENSMUST00000145050	antisense		1	-1	191901721	622
ENSMUSG00000038872	protein_coding	Zfhx3	ENSMUST00000221100	processed_transcript		8	1	108612338	1011
ENSMUSG00000038872	protein_coding	Zfhx3	ENSMUST00000221237	processed_transcript		8	1	108638035	817
ENSMUSG00000041801	protein_coding	Phlda3	ENSMUST00000038945	protein_coding	principal1	1	1	135766119	1435
ENSMUSG00000030898	protein_coding	Cckbr	ENSMUST00000181339	protein_coding		7	1	105425817	1326
ENSMUSG00000038872	protein_coding	Zfhx3	ENSMUST00000188994	protein_coding		8	1	108703100	1212
ENSMUSG00000041801	protein_coding	Phlda3	ENSMUST00000136445	processed_transcript		1	1	135767134	569
ENSMUSG00000038872	protein_coding	Zfhx3	ENSMUST00000043896	protein_coding	principal1	8	1	108714644	16433
ENSMUSG00000003283	protein_coding	Hck	ENSMUST00000003370	protein_coding	alternative2	2	1	153108468	2092
ENSMUSG00000084957	protein_coding	Bbip1	ENSMUST00000135402	protein_coding	principal1	19	-1	53944627	2043
ENSMUSG00000098047	processed_pseudogene	Gm18822	ENSMUST00000182857	processed_pseudogene		3	-1	8616504	1025
ENSMUSG00000030397	protein_coding	Mark4	ENSMUST00000207767	processed_transcript		7	-1	19451734	3172
ENSMUSG00000028010	protein_coding	Gar1	ENSMUST00000029643	protein_coding	principal1	3	-1	129831396	1271
ENSMUSG00000085420	antisense	4930453O03Rik	ENSMUST00000147594	antisense		1	-1	88352930	1236
ENSMUSG00000102989	TEC	Gm38318	ENSMUST00000195769	TEC		8	1	108867562	1706
ENSMUSG00000082548	processed_pseudogene	Gm12377	ENSMUST00000118656	processed_pseudogene		3	-1	36695053	252
ENSMUSG00000024224	protein_coding	Clpsl2	ENSMUST00000025061	protein_coding	principal1	17	1	28549411	522
ENSMUSG00000095545	protein_coding	Zfp969	ENSMUST00000179061	protein_coding	principal1	2	-1	175703646	1458
ENSMUSG00000055833	antisense	1700034H15Rik	ENSMUST00000139827	antisense		1	-1	191907519	4354
ENSMUSG00000030397	protein_coding	Mark4	ENSMUST00000209058	nonsense_mediated_decay		7	-1	19458795	3561
ENSMUSG00000084957	protein_coding	Bbip1	ENSMUST00000236885	protein_coding	principal1	19	-1	53944180	838
ENSMUSG00000095545	protein_coding	Zfp969	ENSMUST00000131041	protein_coding		2	-1	175703646	252
ENSMUSG00000093697	antisense	Gm20686	ENSMUST00000175846	antisense		8	-1	108921874	535
ENSMUSG00000095545	protein_coding	Zfp969	ENSMUST00000109027	protein_coding		2	-1	175703646	417
ENSMUSG00000003283	protein_coding	Hck	ENSMUST00000189688	protein_coding	principal2	2	1	153108468	2090
ENSMUSG00000105820	antisense	Gm43400	ENSMUST00000197294	antisense		3	1	153913095	1254
ENSMUSG00000028010	protein_coding	Gar1	ENSMUST00000134174	protein_coding		3	-1	129829366	520
ENSMUSG00000110613	lincRNA	Lncbate1	ENSMUST00000211953	lincRNA		8	-1	108584595	812
ENSMUSG00000097342	sense_overlapping	Gm26618	ENSMUST00000181123	sense_overlapping		X	-1	6092269	497
ENSMUSG00000081687	processed_pseudogene	Gm13996	ENSMUST00000118456	processed_pseudogene		2	1	103547259	430
ENSMUSG00000084957	protein_coding	Bbip1	ENSMUST00000235688	protein_coding	principal1	19	-1	53944460	613
ENSMUSG00000055833	antisense	1700034H15Rik	ENSMUST00000069573	antisense		1	-1	191907527	1461
ENSMUSG00000030397	protein_coding	Mark4	ENSMUST00000208650	retained_intron		7	-1	19428452	1324
ENSMUSG00000028010	protein_coding	Gar1	ENSMUST00000143545	retained_intron		3	-1	129825674	418
ENSMUSG00000107600	processed_pseudogene	Gm6308	ENSMUST00000203226	processed_pseudogene		6	1	124297863	313
ENSMUSG00000104875	lincRNA	Gm43397	ENSMUST00000196422	lincRNA		5	1	143334635	481
ENSMUSG00000084957	protein_coding	Bbip1	ENSMUST00000237049	retained_intron		19	-1	53944231	2120
ENSMUSG00000084027	processed_pseudogene	Gm12376	ENSMUST00000120538	processed_pseudogene		3	-1	36824958	607
ENSMUSG00000028010	protein_coding	Gar1	ENSMUST00000127864	retained_intron		3	-1	129827280	522
ENSMUSG00000076925	TR_J_gene	Traj3	ENSMUST00000103737	TR_J_gene	principal1	14	1	54217292	66
ENSMUSG00000030397	protein_coding	Mark4	ENSMUST00000209011	retained_intron		7	-1	19448616	599
ENSMUSG00000084957	protein_coding	Bbip1	ENSMUST00000235348	protein_coding	principal1	19	-1	53944474	787
ENSMUSG00000117487	lincRNA	Gm50062	ENSMUST00000234404	lincRNA		17	1	24483215	567
ENSMUSG00000028010	protein_coding	Gar1	ENSMUST00000128441	processed_transcript		3	-1	129831360	440
ENSMUSG00000028010	protein_coding	Gar1	ENSMUST00000149071	protein_coding		3	-1	129830932	685
ENSMUSG00000054498	protein_coding	Olfr308	ENSMUST00000214977	protein_coding	principal1	7	-1	86325630	4991
ENSMUSG00000094932	protein_coding	Gm2007	ENSMUST00000177981	protein_coding		2	1	175741537	195
ENSMUSG00000015443	protein_coding	Gzmn	ENSMUST00000015587	protein_coding	principal1	14	-1	56174599	956
ENSMUSG00000054498	protein_coding	Olfr308	ENSMUST00000215841	processed_transcript		7	-1	86325630	3751
ENSMUSG00000084957	protein_coding	Bbip1	ENSMUST00000236370	protein_coding	principal1	19	-1	53944228	662
ENSMUSG00000080962	processed_pseudogene	Gm11453	ENSMUST00000117318	processed_pseudogene		2	-1	162983261	1007
ENSMUSG00000054498	protein_coding	Olfr308	ENSMUST00000044256	protein_coding	principal1	7	-1	86322050	1056
ENSMUSG00000094932	protein_coding	Gm2007	ENSMUST00000178133	protein_coding	principal1	2	1	175741537	1497
ENSMUSG00000039098	antisense	Gm9767	ENSMUST00000041011	antisense		10	1	26078255	1193
ENSMUSG00000015443	protein_coding	Gzmn	ENSMUST00000225535	protein_coding		14	-1	56174599	989
ENSMUSG00000094932	protein_coding	Gm2007	ENSMUST00000189494	protein_coding		2	1	175748564	1494
ENSMUSG00000084957	protein_coding	Bbip1	ENSMUST00000236098	protein_coding	principal1	19	-1	53944207	656
ENSMUSG00000085366	unprocessed_pseudogene	Gm16358	ENSMUST00000146046	unprocessed_pseudogene		2	1	175771853	210
ENSMUSG00000114392	unprocessed_pseudogene	Gm8961	ENSMUST00000224626	unprocessed_pseudogene		14	-1	56180711	740
ENSMUSG00000073294	protein_coding	AU022751	ENSMUST00000101698	protein_coding	alternative2	X	-1	6083419	1838
ENSMUSG00000084957	protein_coding	Bbip1	ENSMUST00000236127	retained_intron		19	-1	53944619	995
ENSMUSG00000049420	protein_coding	Tmem200a	ENSMUST00000217910	processed_transcript		10	-1	26078650	2886
ENSMUSG00000084957	protein_coding	Bbip1	ENSMUST00000236900	retained_intron		19	-1	53944478	986
ENSMUSG00000055610	protein_coding	Olfr307	ENSMUST00000213705	protein_coding	principal1	7	-1	86337566	4498
ENSMUSG00000078889	protein_coding	Gm14288	ENSMUST00000109020	protein_coding	principal2	2	-1	175801093	3438
ENSMUSG00000073294	protein_coding	AU022751	ENSMUST00000117544	protein_coding	principal4	X	-1	6083419	2201
ENSMUSG00000055610	protein_coding	Olfr307	ENSMUST00000217494	protein_coding	principal1	7	-1	86337586	4515
ENSMUSG00000051706	protein_coding	Olfr1325	ENSMUST00000216108	protein_coding	alternative2	X	1	74592679	3535
ENSMUSG00000044726	protein_coding	Erich5	ENSMUST00000060894	protein_coding	principal1	15	1	34453305	2383
ENSMUSG00000051706	protein_coding	Olfr1325	ENSMUST00000216007	protein_coding	alternative2	X	1	74592679	3617
ENSMUSG00000051706	protein_coding	Olfr1325	ENSMUST00000054541	protein_coding	principal2	X	1	74594328	948
ENSMUSG00000055610	protein_coding	Olfr307	ENSMUST00000069279	protein_coding	principal1	7	-1	86336417	1012
ENSMUSG00000049420	protein_coding	Tmem200a	ENSMUST00000218232	protein_coding	principal1	10	-1	26078963	3510
ENSMUSG00000078889	protein_coding	Gm14288	ENSMUST00000123863	protein_coding	alternative2	2	-1	175800961	267
ENSMUSG00000111334	processed_transcript	Gm30015	ENSMUST00000216983	lincRNA		9	-1	43720997	369
ENSMUSG00000082109	processed_pseudogene	Rpl19-ps12	ENSMUST00000121251	processed_pseudogene		X	1	6071222	591
ENSMUSG00000111334	processed_transcript	Gm30015	ENSMUST00000215497	lincRNA		9	-1	43736955	722
ENSMUSG00000111334	processed_transcript	Gm30015	ENSMUST00000216604	lincRNA		9	-1	43746100	1134
ENSMUSG00000025873	protein_coding	Faf2	ENSMUST00000126071	protein_coding	principal1	13	1	54621784	4322
ENSMUSG00000111334	processed_transcript	Gm30015	ENSMUST00000216455	lincRNA		9	-1	43745454	984
ENSMUSG00000092388	unprocessed_pseudogene	Olfr306-ps1	ENSMUST00000174677	unprocessed_pseudogene		7	-1	86353719	743
ENSMUSG00000111334	processed_transcript	Gm30015	ENSMUST00000217551	lincRNA		9	-1	43741695	2828
ENSMUSG00000049420	protein_coding	Tmem200a	ENSMUST00000066049	protein_coding	principal1	10	-1	26079052	4115
ENSMUSG00000111334	processed_transcript	Gm30015	ENSMUST00000213726	retained_intron		9	-1	43746000	997
ENSMUSG00000025873	protein_coding	Faf2	ENSMUST00000220453	retained_intron		13	1	54621801	3363
ENSMUSG00000049420	protein_coding	Tmem200a	ENSMUST00000219651	protein_coding		10	-1	26017543	767
ENSMUSG00000055571	protein_coding	Olfr305	ENSMUST00000213869	protein_coding	principal1	7	-1	86366928	3530
ENSMUSG00000025873	protein_coding	Faf2	ENSMUST00000135015	nonsense_mediated_decay		13	1	54621804	371
ENSMUSG00000055571	protein_coding	Olfr305	ENSMUST00000213255	protein_coding	principal1	7	-1	86366837	3749
ENSMUSG00000049420	protein_coding	Tmem200a	ENSMUST00000219338	protein_coding		10	-1	26078158	659
ENSMUSG00000049420	protein_coding	Tmem200a	ENSMUST00000219872	protein_coding		10	-1	26078207	232
ENSMUSG00000055571	protein_coding	Olfr305	ENSMUST00000216700	protein_coding	principal1	7	-1	86366837	3734
ENSMUSG00000079534	protein_coding	Gm5640	ENSMUST00000114119	protein_coding	principal1	X	-1	74645635	2861
ENSMUSG00000055571	protein_coding	Olfr305	ENSMUST00000069236	protein_coding	principal1	7	-1	86364335	960
ENSMUSG00000025873	protein_coding	Faf2	ENSMUST00000026991	protein_coding		13	1	54621824	1748
ENSMUSG00000081804	unprocessed_pseudogene	Xlr5d-ps	ENSMUST00000117501	unprocessed_pseudogene		X	1	74652679	782
ENSMUSG00000073295	protein_coding	Nudt11	ENSMUST00000103007	protein_coding	principal1	X	1	6047453	3036
ENSMUSG00000062426	protein_coding	Olfr304	ENSMUST00000077210	protein_coding	principal1	7	-1	86386658	1002
ENSMUSG00000020062	protein_coding	Slc5a8	ENSMUST00000020255	protein_coding	principal1	10	1	88885992	5331
ENSMUSG00000025873	protein_coding	Faf2	ENSMUST00000137413	protein_coding		13	1	54621835	394
ENSMUSG00000025873	protein_coding	Faf2	ENSMUST00000135232	protein_coding		13	1	54621835	562
ENSMUSG00000083356	processed_pseudogene	Gm11708	ENSMUST00000119530	processed_pseudogene		11	-1	107004740	832
ENSMUSG00000022439	protein_coding	Parvg	ENSMUST00000127551	processed_transcript		15	1	84324026	351
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000144668	protein_coding	principal2	4	-1	134000890	3219
ENSMUSG00000025873	protein_coding	Faf2	ENSMUST00000124752	protein_coding		13	1	54621838	951
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000154428	nonsense_mediated_decay		7	-1	80341480	3932
ENSMUSG00000025873	protein_coding	Faf2	ENSMUST00000153894	nonsense_mediated_decay		13	1	54641543	560
ENSMUSG00000104102	lincRNA	Gm32496	ENSMUST00000191988	lincRNA		3	1	8628051	702
ENSMUSG00000008658	protein_coding	Rbfox1	ENSMUST00000230658	protein_coding		16	1	5885355	1504
ENSMUSG00000025873	protein_coding	Faf2	ENSMUST00000141915	retained_intron		13	1	54651441	921
ENSMUSG00000008658	protein_coding	Rbfox1	ENSMUST00000230336	processed_transcript		16	1	5885587	629
ENSMUSG00000019929	protein_coding	Dcn	ENSMUST00000105287	protein_coding	principal1	10	1	97479609	1758
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000027174	protein_coding	principal1	1	1	59684977	1713
ENSMUSG00000068923	protein_coding	Syt11	ENSMUST00000107503	protein_coding		3	-1	88752051	3575
ENSMUSG00000019929	protein_coding	Dcn	ENSMUST00000163448	protein_coding	principal1	10	1	97482367	1758
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000190231	protein_coding		1	1	59684985	639
ENSMUSG00000037060	protein_coding	Cavin3	ENSMUST00000047040	protein_coding	principal1	7	-1	105482300	1662
ENSMUSG00000031512	protein_coding	Tex29	ENSMUST00000033909	protein_coding	principal2	8	1	11840474	822
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000189289	retained_intron		1	1	59685003	653
ENSMUSG00000063382	protein_coding	Bcl9l	ENSMUST00000220303	protein_coding	alternative2	9	1	44482825	5760
ENSMUSG00000019929	protein_coding	Dcn	ENSMUST00000218853	retained_intron		10	1	97482438	523
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000146241	processed_transcript		4	-1	134000871	3179
ENSMUSG00000019929	protein_coding	Dcn	ENSMUST00000219784	protein_coding		10	1	97482853	254
ENSMUSG00000109735	TEC	Gm45667	ENSMUST00000210380	TEC		7	1	105481927	1316
ENSMUSG00000024976	protein_coding	Shoc2	ENSMUST00000169861	protein_coding	principal1	19	1	53944306	3664
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000105887	protein_coding	alternative1	4	-1	134000871	2038
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000186044	retained_intron		1	1	59685006	725
ENSMUSG00000031512	protein_coding	Tex29	ENSMUST00000209704	nonsense_mediated_decay		8	1	11840522	923
ENSMUSG00000022109	protein_coding	Med4	ENSMUST00000022705	protein_coding	principal1	14	1	73510025	1328
ENSMUSG00000068923	protein_coding	Syt11	ENSMUST00000107505	protein_coding	principal1	3	-1	88775164	5020
ENSMUSG00000031512	protein_coding	Tex29	ENSMUST00000209692	protein_coding	alternative2	8	1	11840532	884
ENSMUSG00000024976	protein_coding	Shoc2	ENSMUST00000236144	processed_transcript		19	1	53944873	1456
ENSMUSG00000078652	protein_coding	Psme3	ENSMUST00000142640	protein_coding		11	1	101316213	698
ENSMUSG00000063382	protein_coding	Bcl9l	ENSMUST00000217898	processed_transcript		9	1	44482866	836
ENSMUSG00000019929	protein_coding	Dcn	ENSMUST00000219539	retained_intron		10	1	97483337	4692
ENSMUSG00000022109	protein_coding	Med4	ENSMUST00000226256	retained_intron		14	1	73510032	1455
ENSMUSG00000031512	protein_coding	Tex29	ENSMUST00000144007	nonsense_mediated_decay		8	1	11840611	421
ENSMUSG00000033055	protein_coding	Ankrd54	ENSMUST00000040676	protein_coding	principal1	15	-1	79062885	1904
ENSMUSG00000024976	protein_coding	Shoc2	ENSMUST00000025932	protein_coding	principal1	19	1	53944880	3965
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000153532	retained_intron		11	-1	120624969	1755
ENSMUSG00000042282	protein_coding	Gucy2f	ENSMUST00000042530	protein_coding	principal1	X	-1	142196931	8122
ENSMUSG00000068923	protein_coding	Syt11	ENSMUST00000183267	protein_coding		3	-1	88762384	1319
ENSMUSG00000032012	protein_coding	Nectin1	ENSMUST00000034510	protein_coding	principal1	9	1	43743984	5653
ENSMUSG00000022109	protein_coding	Med4	ENSMUST00000228141	retained_intron		14	1	73510038	2103
ENSMUSG00000031512	protein_coding	Tex29	ENSMUST00000132536	processed_transcript		8	1	11842061	476
ENSMUSG00000068923	protein_coding	Syt11	ENSMUST00000130869	processed_transcript		3	-1	88775152	371
ENSMUSG00000031512	protein_coding	Tex29	ENSMUST00000166638	protein_coding	principal2	8	1	11840919	561
ENSMUSG00000024976	protein_coding	Shoc2	ENSMUST00000237296	processed_transcript		19	1	53944885	443
ENSMUSG00000044770	protein_coding	Scml4	ENSMUST00000063063	protein_coding	principal1	10	1	42860370	4885
ENSMUSG00000083481	processed_pseudogene	Rps8-ps2	ENSMUST00000118709	processed_pseudogene		2	-1	175805606	624
ENSMUSG00000082675	processed_pseudogene	Gm6382	ENSMUST00000118873	processed_pseudogene		X	1	142210884	942
ENSMUSG00000112808	processed_pseudogene	Gm4739	ENSMUST00000218296	processed_pseudogene		10	1	26107789	633
ENSMUSG00000032012	protein_coding	Nectin1	ENSMUST00000239313	protein_coding		9	1	43744644	1350
ENSMUSG00000022860	protein_coding	Chodl	ENSMUST00000114216	protein_coding		16	1	78930948	1550
ENSMUSG00000086941	unprocessed_pseudogene	Gm2020	ENSMUST00000145242	unprocessed_pseudogene		2	1	175844964	579
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000172361	protein_coding	principal4	5	-1	99978938	6811
ENSMUSG00000044770	protein_coding	Scml4	ENSMUST00000157071	protein_coding		10	1	42860543	365
ENSMUSG00000024976	protein_coding	Shoc2	ENSMUST00000235945	processed_transcript		19	1	53987965	752
ENSMUSG00000091842	processed_pseudogene	Gm16490	ENSMUST00000165299	processed_pseudogene		18	1	35770318	351
ENSMUSG00000032012	protein_coding	Nectin1	ENSMUST00000216893	protein_coding		9	1	43794121	384
ENSMUSG00000068923	protein_coding	Syt11	ENSMUST00000090945	protein_coding	principal1	3	-1	88772599	4567
ENSMUSG00000044770	protein_coding	Scml4	ENSMUST00000105495	protein_coding		10	1	42860667	1033
ENSMUSG00000109772	lincRNA	Gm39132	ENSMUST00000210446	lincRNA		8	1	11874159	429
ENSMUSG00000024976	protein_coding	Shoc2	ENSMUST00000237908	protein_coding		19	1	53988173	2976
ENSMUSG00000110002	lincRNA	Gm45680	ENSMUST00000211135	lincRNA		8	-1	11948297	214
ENSMUSG00000024976	protein_coding	Shoc2	ENSMUST00000237801	nonsense_mediated_decay		19	1	54003086	632
ENSMUSG00000044770	protein_coding	Scml4	ENSMUST00000105494	protein_coding		10	1	42860793	4166
ENSMUSG00000109995	lincRNA	B020031H02Rik	ENSMUST00000209977	lincRNA		8	1	11948339	3673
ENSMUSG00000033055	protein_coding	Ankrd54	ENSMUST00000133541	retained_intron		15	-1	79062885	2582
ENSMUSG00000078607	protein_coding	1810010H24Rik	ENSMUST00000140447	protein_coding	alternative2	11	1	107025681	1677
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000012262	protein_coding	principal2	4	-1	134000887	3133
ENSMUSG00000044770	protein_coding	Scml4	ENSMUST00000136841	processed_transcript		10	1	42865514	349
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000164181	protein_coding	principal2	10	-1	128493875	665
ENSMUSG00000044770	protein_coding	Scml4	ENSMUST00000125576	protein_coding		10	1	42902473	887
ENSMUSG00000032012	protein_coding	Nectin1	ENSMUST00000216905	processed_transcript		9	1	43820947	328
ENSMUSG00000078607	protein_coding	1810010H24Rik	ENSMUST00000239464	protein_coding		11	1	107028223	731
ENSMUSG00000033055	protein_coding	Ankrd54	ENSMUST00000156411	protein_coding		15	-1	79055413	790
ENSMUSG00000032012	protein_coding	Nectin1	ENSMUST00000180221	retained_intron		9	1	43829831	613
ENSMUSG00000022860	protein_coding	Chodl	ENSMUST00000069148	protein_coding		16	1	78930948	2051
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000134096	processed_transcript		4	-1	133980610	2683
ENSMUSG00000062624	protein_coding	Cyp2c67	ENSMUST00000067328	protein_coding	principal1	19	-1	39649051	1732
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000019128	protein_coding	alternative2	5	-1	99978937	2000
ENSMUSG00000111129	TEC	Gm47542	ENSMUST00000213140	TEC		9	-1	43736436	2323
ENSMUSG00000033055	protein_coding	Ankrd54	ENSMUST00000125523	protein_coding		15	-1	79055344	502
ENSMUSG00000101899	lincRNA	Gm29175	ENSMUST00000189500	lincRNA		8	1	12282211	402
ENSMUSG00000063382	protein_coding	Bcl9l	ENSMUST00000218183	protein_coding	principal2	9	1	44487247	6771
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000142660	processed_transcript		4	-1	134000393	3043
ENSMUSG00000078607	protein_coding	1810010H24Rik	ENSMUST00000106767	protein_coding	principal2	11	1	107028223	1100
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000105886	protein_coding		4	-1	134000393	1015
ENSMUSG00000110412	lincRNA	Gm33175	ENSMUST00000211562	lincRNA		8	-1	12319480	461
ENSMUSG00000022860	protein_coding	Chodl	ENSMUST00000023568	protein_coding	principal1	16	1	78930948	2535
ENSMUSG00000063382	protein_coding	Bcl9l	ENSMUST00000220292	processed_transcript		9	1	44498307	419
ENSMUSG00000076926	TR_J_gene	Traj2	ENSMUST00000103738	TR_J_gene	principal1	14	1	54217836	66
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000191142	protein_coding		1	1	59685009	9507
ENSMUSG00000033055	protein_coding	Ankrd54	ENSMUST00000153003	nonsense_mediated_decay		15	-1	79062836	1034
ENSMUSG00000022860	protein_coding	Chodl	ENSMUST00000232415	protein_coding		16	1	78931277	1035
ENSMUSG00000068876	protein_coding	Cgn	ENSMUST00000107272	protein_coding	alternative2	3	-1	94786463	4963
ENSMUSG00000058192	protein_coding	Zfp846	ENSMUST00000214194	retained_intron		9	1	20581291	903
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000105889	protein_coding		4	-1	134000918	890
ENSMUSG00000022860	protein_coding	Chodl	ENSMUST00000231883	retained_intron		16	1	78943813	1758
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000185772	protein_coding		1	1	59685021	461
ENSMUSG00000033055	protein_coding	Ankrd54	ENSMUST00000229322	retained_intron		15	-1	79062622	714
ENSMUSG00000044770	protein_coding	Scml4	ENSMUST00000130511	retained_intron		10	1	42934338	2381
ENSMUSG00000033405	protein_coding	Nudt15	ENSMUST00000043813	protein_coding	principal1	14	-1	73548242	3579
ENSMUSG00000074250	transcribed_processed_pseudogene	Gm10653	ENSMUST00000132250	processed_transcript		9	-1	62862024	1232
ENSMUSG00000063382	protein_coding	Bcl9l	ENSMUST00000074989	protein_coding	principal2	9	1	44499136	5339
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000150729	processed_transcript		4	-1	133996924	748
ENSMUSG00000074250	transcribed_processed_pseudogene	Gm10653	ENSMUST00000156423	processed_transcript		9	-1	62868000	1232
ENSMUSG00000033055	protein_coding	Ankrd54	ENSMUST00000151889	protein_coding		15	-1	79062882	687
ENSMUSG00000022439	protein_coding	Parvg	ENSMUST00000023074	protein_coding	principal3	15	1	84324720	2619
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000105885	protein_coding		4	-1	134000393	998
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000112939	protein_coding	alternative2	5	-1	99978917	1670
ENSMUSG00000012117	protein_coding	Dhdds	ENSMUST00000130464	protein_coding		4	-1	133994199	603
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000219655	processed_transcript		10	-1	128493031	651
ENSMUSG00000074250	transcribed_processed_pseudogene	Gm10653	ENSMUST00000139570	transcribed_processed_pseudogene		9	-1	62842347	835
ENSMUSG00000033405	protein_coding	Nudt15	ENSMUST00000226903	processed_transcript		14	-1	73525211	766
ENSMUSG00000044770	protein_coding	Scml4	ENSMUST00000153091	retained_intron		10	1	42934916	1563
ENSMUSG00000033055	protein_coding	Ankrd54	ENSMUST00000128631	retained_intron		15	-1	79062893	2012
ENSMUSG00000063382	protein_coding	Bcl9l	ENSMUST00000218913	protein_coding		9	1	44499272	522
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000189327	nonsense_mediated_decay		1	1	59685054	702
ENSMUSG00000068876	protein_coding	Cgn	ENSMUST00000107273	protein_coding	alternative2	3	-1	94786492	5016
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000190759	retained_intron		1	1	59690179	623
ENSMUSG00000011263	protein_coding	Exoc3l2	ENSMUST00000137613	protein_coding	principal1	7	1	19463331	4016
ENSMUSG00000044770	protein_coding	Scml4	ENSMUST00000127675	processed_transcript		10	1	42939881	2214
ENSMUSG00000022439	protein_coding	Parvg	ENSMUST00000139235	processed_transcript		15	1	84324734	363
ENSMUSG00000068876	protein_coding	Cgn	ENSMUST00000153263	protein_coding		3	-1	94786451	2210
ENSMUSG00000022439	protein_coding	Parvg	ENSMUST00000151072	processed_transcript		15	1	84324762	346
ENSMUSG00000111086	lincRNA	Gm48671	ENSMUST00000214070	lincRNA		10	-1	42888797	739
ENSMUSG00000004127	protein_coding	Trmt10a	ENSMUST00000040321	protein_coding	principal1	3	1	138143448	4025
ENSMUSG00000068876	protein_coding	Cgn	ENSMUST00000155485	protein_coding		3	-1	94786467	2361
ENSMUSG00000011263	protein_coding	Exoc3l2	ENSMUST00000011407	protein_coding		7	1	19489056	2200
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000185368	retained_intron		1	1	59692444	891
ENSMUSG00000042360	processed_transcript	4930433N12Rik	ENSMUST00000048921	lincRNA		9	-1	3199782	1204
ENSMUSG00000022439	protein_coding	Parvg	ENSMUST00000145809	protein_coding		15	1	84324795	380
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000072750	protein_coding	alternative2	5	-1	99978935	1537
ENSMUSG00000060380	lincRNA	C030014I23Rik	ENSMUST00000213746	lincRNA		9	1	44468344	1204
ENSMUSG00000109301	processed_pseudogene	Gm45167	ENSMUST00000208007	processed_pseudogene		7	1	19468228	322
ENSMUSG00000060380	lincRNA	C030014I23Rik	ENSMUST00000217463	lincRNA		9	1	44468477	1370
ENSMUSG00000042360	processed_transcript	4930433N12Rik	ENSMUST00000188577	retained_intron		9	-1	3199799	1128
ENSMUSG00000068876	protein_coding	Cgn	ENSMUST00000238849	protein_coding	principal2	3	-1	94786515	5039
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000189919	nonsense_mediated_decay		1	1	59696027	598
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000219554	retained_intron		10	-1	128493759	790
ENSMUSG00000058192	protein_coding	Zfp846	ENSMUST00000115557	protein_coding	principal1	9	1	20581325	12974
ENSMUSG00000110425	processed_pseudogene	Gm32390	ENSMUST00000212713	processed_pseudogene		9	-1	3138739	1172
ENSMUSG00000110140	lincRNA	5430421F17Rik	ENSMUST00000210268	lincRNA		8	-1	25306270	2295
ENSMUSG00000060380	lincRNA	C030014I23Rik	ENSMUST00000136322	lincRNA		9	1	44478778	1270
ENSMUSG00000033955	protein_coding	Tnks1bp1	ENSMUST00000139915	processed_transcript		2	1	85048022	433
ENSMUSG00000004127	protein_coding	Trmt10a	ENSMUST00000161791	retained_intron		3	1	138143469	4258
ENSMUSG00000110587	processed_pseudogene	Gm7344	ENSMUST00000212122	processed_pseudogene		9	1	3187110	1222
ENSMUSG00000060380	lincRNA	C030014I23Rik	ENSMUST00000080911	lincRNA		9	1	44477924	1810
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000217733	protein_coding		10	-1	128493854	1668
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000190265	nonsense_mediated_decay		1	1	59698416	714
ENSMUSG00000110140	lincRNA	5430421F17Rik	ENSMUST00000209774	lincRNA		8	-1	25306205	2792
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000107368	protein_coding		7	-1	80346009	3685
ENSMUSG00000094574	unprocessed_pseudogene	Gm15027	ENSMUST00000120922	unprocessed_pseudogene		X	1	13179443	138
ENSMUSG00000058192	protein_coding	Zfp846	ENSMUST00000140668	nonsense_mediated_decay		9	1	20581525	2661
ENSMUSG00000004127	protein_coding	Trmt10a	ENSMUST00000162864	protein_coding	principal1	3	1	138143517	4064
ENSMUSG00000022439	protein_coding	Parvg	ENSMUST00000125928	protein_coding		15	1	84326119	381
ENSMUSG00000078652	protein_coding	Psme3	ENSMUST00000019470	protein_coding	principal1	11	1	101316213	2664
ENSMUSG00000110980	lincRNA	Gm47204	ENSMUST00000216321	lincRNA		9	-1	44479759	1832
ENSMUSG00000020490	protein_coding	Btnl10	ENSMUST00000069941	protein_coding	principal1	11	1	58917908	4400
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000218127	protein_coding	alternative1	10	-1	128493857	691
ENSMUSG00000022439	protein_coding	Parvg	ENSMUST00000163667	protein_coding	alternative2	15	1	84326119	2700
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000171106	nonsense_mediated_decay		5	-1	99976551	1117
ENSMUSG00000094259	unprocessed_pseudogene	Gm14536	ENSMUST00000118324	unprocessed_pseudogene		X	1	13189538	138
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000238999	processed_transcript		7	-1	80340171	3180
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000187491	nonsense_mediated_decay		1	1	59704159	373
ENSMUSG00000058192	protein_coding	Zfp846	ENSMUST00000217655	retained_intron		9	1	20581532	516
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000218813	retained_intron		10	-1	128493900	3040
ENSMUSG00000058192	protein_coding	Zfp846	ENSMUST00000060063	protein_coding	principal1	9	1	20587891	1626
ENSMUSG00000078652	protein_coding	Psme3	ENSMUST00000151385	protein_coding		11	1	101316977	653
ENSMUSG00000033955	protein_coding	Tnks1bp1	ENSMUST00000151092	processed_transcript		2	1	85048055	4199
ENSMUSG00000004127	protein_coding	Trmt10a	ENSMUST00000159622	protein_coding		3	1	138143799	567
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000206363	protein_coding		7	-1	80339566	446
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000187837	protein_coding		1	1	59704198	638
ENSMUSG00000112064	processed_pseudogene	Gm47399	ENSMUST00000218223	processed_pseudogene		12	1	51995036	474
ENSMUSG00000020490	protein_coding	Btnl10	ENSMUST00000142499	nonsense_mediated_decay		11	1	58917952	2915
ENSMUSG00000028798	protein_coding	Eif3i	ENSMUST00000102593	protein_coding	principal1	4	-1	129600648	1123
ENSMUSG00000026020	protein_coding	Nop58	ENSMUST00000188390	protein_coding		1	1	59704709	585
ENSMUSG00000004127	protein_coding	Trmt10a	ENSMUST00000159481	protein_coding		3	1	138143861	549
ENSMUSG00000115490	lincRNA	4930404O17Rik	ENSMUST00000226645	lincRNA		14	-1	124742797	857
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000171640	nonsense_mediated_decay		5	-1	99966174	737
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000219236	protein_coding		10	-1	128493847	692
ENSMUSG00000078652	protein_coding	Psme3	ENSMUST00000127998	processed_transcript		11	1	101317023	524
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000133728	protein_coding		7	-1	80340206	907
ENSMUSG00000004127	protein_coding	Trmt10a	ENSMUST00000161141	protein_coding		3	1	138143910	588
ENSMUSG00000116442	processed_pseudogene	Gm5214	ENSMUST00000230576	processed_pseudogene		15	-1	84346779	721
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000217969	protein_coding		10	-1	128493857	608
ENSMUSG00000033955	protein_coding	Tnks1bp1	ENSMUST00000150200	processed_transcript		2	1	85050460	342
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000164833	nonsense_mediated_decay		5	-1	99964750	699
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000206032	retained_intron		7	-1	80340201	1927
ENSMUSG00000028798	protein_coding	Eif3i	ENSMUST00000136843	retained_intron		4	-1	129595768	797
ENSMUSG00000032245	protein_coding	Cln6	ENSMUST00000034776	protein_coding	principal1	9	1	62838785	2142
ENSMUSG00000104776	antisense	Gm43691	ENSMUST00000196625	antisense		3	1	138103916	697
ENSMUSG00000047880	protein_coding	Cxcr5	ENSMUST00000215293	protein_coding	principal1	9	-1	44561877	2846
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000217776	protein_coding		10	-1	128493824	562
ENSMUSG00000020490	protein_coding	Btnl10	ENSMUST00000020792	protein_coding		11	1	58918057	1028
ENSMUSG00000078652	protein_coding	Psme3	ENSMUST00000131170	processed_transcript		11	1	101319834	778
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000141774	retained_intron		7	-1	80340148	768
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000166984	protein_coding	principal2	3	1	152210422	6523
ENSMUSG00000028798	protein_coding	Eif3i	ENSMUST00000135055	protein_coding		4	-1	129600599	734
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000168396	nonsense_mediated_decay		5	-1	99978624	1104
ENSMUSG00000047880	protein_coding	Cxcr5	ENSMUST00000215661	protein_coding		9	-1	44526582	358
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000127997	protein_coding		7	-1	80340217	350
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000174484	protein_coding		14	1	55578123	882
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000220307	nonsense_mediated_decay		10	-1	128493854	496
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000170654	retained_intron		5	-1	99966387	425
ENSMUSG00000028798	protein_coding	Eif3i	ENSMUST00000155428	processed_transcript		4	-1	129600599	401
ENSMUSG00000032245	protein_coding	Cln6	ENSMUST00000141821	nonsense_mediated_decay		9	1	62838792	450
ENSMUSG00000020490	protein_coding	Btnl10	ENSMUST00000108818	protein_coding		11	1	58918057	1028
ENSMUSG00000047880	protein_coding	Cxcr5	ENSMUST00000213357	processed_transcript		9	-1	44556286	377
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000145351	processed_transcript		7	-1	80340219	388
ENSMUSG00000028798	protein_coding	Eif3i	ENSMUST00000143384	retained_intron		4	-1	129600616	2323
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000135503	retained_intron		7	-1	80340211	348
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000218713	processed_transcript		10	-1	128494051	369
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000171786	protein_coding		5	-1	99978934	493
ENSMUSG00000101826	processed_pseudogene	Gm8581	ENSMUST00000188636	processed_pseudogene		1	-1	57519412	890
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000206494	retained_intron		7	-1	80347993	3912
ENSMUSG00000032245	protein_coding	Cln6	ENSMUST00000138276	nonsense_mediated_decay		9	1	62846015	560
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000220427	nonsense_mediated_decay		10	-1	128493829	746
ENSMUSG00000115145	antisense	Gm35166	ENSMUST00000228204	antisense		14	-1	47508187	438
ENSMUSG00000000568	protein_coding	Hnrnpd	ENSMUST00000170912	protein_coding		5	-1	99978859	478
ENSMUSG00000033955	protein_coding	Tnks1bp1	ENSMUST00000126309	processed_transcript		2	1	85050608	5885
ENSMUSG00000102685	TEC	Gm37373	ENSMUST00000194005	TEC		1	-1	57523642	2812
ENSMUSG00000056050	protein_coding	Mia3	ENSMUST00000069922	protein_coding		1	-1	183354040	3071
ENSMUSG00000047880	protein_coding	Cxcr5	ENSMUST00000062215	protein_coding	principal1	9	-1	44526421	2614
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000218170	retained_intron		10	-1	128493793	824
ENSMUSG00000032245	protein_coding	Cln6	ENSMUST00000124984	protein_coding		9	1	62847033	850
ENSMUSG00000024225	protein_coding	Clps	ENSMUST00000025062	protein_coding	principal1	17	-1	28560766	611
ENSMUSG00000030533	protein_coding	Unc45a	ENSMUST00000032748	protein_coding	principal1	7	-1	80340219	3260
ENSMUSG00000021298	protein_coding	Gpr132	ENSMUST00000021729	protein_coding	principal1	12	-1	112860952	2478
ENSMUSG00000047880	protein_coding	Cxcr5	ENSMUST00000179828	protein_coding	principal1	9	-1	44556391	2824
ENSMUSG00000033955	protein_coding	Tnks1bp1	ENSMUST00000148682	processed_transcript		2	1	85050893	1214
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000199202	protein_coding		3	1	152210473	1040
ENSMUSG00000080857	processed_pseudogene	Gm12859	ENSMUST00000117834	processed_pseudogene		4	-1	118497642	427
ENSMUSG00000020956	protein_coding	Dtd2	ENSMUST00000021339	protein_coding	principal1	12	-1	52006501	2564
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000219100	processed_transcript		10	-1	128494145	620
ENSMUSG00000056050	protein_coding	Mia3	ENSMUST00000195233	protein_coding		1	-1	183345514	918
ENSMUSG00000111312	TEC	Gm47205	ENSMUST00000215551	TEC		9	-1	44483803	2290
ENSMUSG00000058076	protein_coding	Sdhc	ENSMUST00000111336	protein_coding	principal1	1	-1	171150603	3171
ENSMUSG00000032246	protein_coding	Calml4	ENSMUST00000213643	protein_coding		9	1	62858080	710
ENSMUSG00000021298	protein_coding	Gpr132	ENSMUST00000222776	protein_coding		12	-1	112868228	358
ENSMUSG00000090841	protein_coding	Myl6	ENSMUST00000217913	retained_intron		10	-1	128493574	436
ENSMUSG00000024225	protein_coding	Clps	ENSMUST00000114785	protein_coding		17	-1	28560711	372
ENSMUSG00000056050	protein_coding	Mia3	ENSMUST00000192090	retained_intron		1	-1	183351108	777
ENSMUSG00000104810	processed_pseudogene	Gm5684	ENSMUST00000198419	processed_pseudogene		17	1	54002372	961
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000174259	protein_coding	principal1	14	1	55578360	1112
ENSMUSG00000020956	protein_coding	Dtd2	ENSMUST00000085404	protein_coding		12	-1	52006501	1012
ENSMUSG00000102572	TEC	Gm37966	ENSMUST00000193122	TEC		17	1	54223513	326
ENSMUSG00000098912	processed_transcript	1500004A13Rik	ENSMUST00000184014	lincRNA		3	-1	88832547	2135
ENSMUSG00000058076	protein_coding	Sdhc	ENSMUST00000081560	protein_coding		1	-1	171150591	815
ENSMUSG00000008658	protein_coding	Rbfox1	ENSMUST00000056416	protein_coding		16	1	6349138	3061
ENSMUSG00000097393	lincRNA	D030068K23Rik	ENSMUST00000180524	lincRNA		8	1	109075222	3677
ENSMUSG00000103863	unprocessed_pseudogene	Gm37417	ENSMUST00000195257	unprocessed_pseudogene		1	1	174110900	454
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000080202	protein_coding	principal1	11	-1	120625014	1727
ENSMUSG00000056050	protein_coding	Mia3	ENSMUST00000194543	protein_coding		1	-1	183369553	3048
ENSMUSG00000020496	protein_coding	Rnf187	ENSMUST00000094151	protein_coding	principal1	11	-1	58938916	1949
ENSMUSG00000110687	lincRNA	Gm45764	ENSMUST00000213047	lincRNA		8	1	93398905	571
ENSMUSG00000097393	lincRNA	D030068K23Rik	ENSMUST00000180382	lincRNA		8	1	109075223	2617
ENSMUSG00000058076	protein_coding	Sdhc	ENSMUST00000155798	protein_coding		1	-1	171150588	298
ENSMUSG00000116079	protein_coding	Gm36245	ENSMUST00000230670	protein_coding	principal1	15	1	77599258	520
ENSMUSG00000097393	lincRNA	D030068K23Rik	ENSMUST00000212085	lincRNA		8	1	109075245	1351
ENSMUSG00000110670	lincRNA	Gm30132	ENSMUST00000212816	lincRNA		8	-1	93427628	8757
ENSMUSG00000076927	TR_J_pseudogene	Traj1	ENSMUST00000103739	TR_J_pseudogene		14	1	54218814	29
ENSMUSG00000097393	lincRNA	D030068K23Rik	ENSMUST00000181098	lincRNA		8	1	109249866	1399
ENSMUSG00000056050	protein_coding	Mia3	ENSMUST00000109158	protein_coding	principal1	1	-1	183345296	2961
ENSMUSG00000043719	protein_coding	Col6a6	ENSMUST00000098441	protein_coding	principal2	9	-1	105828160	8781
ENSMUSG00000095704	unprocessed_pseudogene	Gm8221	ENSMUST00000178052	unprocessed_pseudogene		15	1	77621834	1110
ENSMUSG00000022110	protein_coding	Sucla2	ENSMUST00000022706	protein_coding	principal1	14	1	73552766	1545
ENSMUSG00000110670	lincRNA	Gm30132	ENSMUST00000212930	lincRNA		8	-1	93427343	1110
ENSMUSG00000110670	lincRNA	Gm30132	ENSMUST00000212825	lincRNA		8	-1	93427399	819
ENSMUSG00000022110	protein_coding	Sucla2	ENSMUST00000161082	retained_intron		14	1	73590508	435
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000110104	protein_coding	alternative1	12	1	98746964	3146
ENSMUSG00000081570	processed_pseudogene	Gm12192	ENSMUST00000120146	processed_pseudogene		11	1	49697880	487
ENSMUSG00000110718	antisense	Gm45765	ENSMUST00000212027	antisense		8	1	93363623	1035
ENSMUSG00000027804	protein_coding	Ppid	ENSMUST00000161460	retained_intron		3	1	79591342	3777
ENSMUSG00000110718	antisense	Gm45765	ENSMUST00000212921	antisense		8	1	93423541	1313
ENSMUSG00000022110	protein_coding	Sucla2	ENSMUST00000162691	protein_coding		14	1	73525319	554
ENSMUSG00000076928	TR_C_gene	Trac	ENSMUST00000198398	TR_C_gene	principal1	14	1	54220521	935
ENSMUSG00000008658	protein_coding	Rbfox1	ENSMUST00000229741	protein_coding	principal1	16	1	7069846	1407
ENSMUSG00000043719	protein_coding	Col6a6	ENSMUST00000060896	protein_coding		9	-1	105809648	3954
ENSMUSG00000083061	processed_pseudogene	Gm12191	ENSMUST00000118307	processed_pseudogene		11	-1	49679057	348
ENSMUSG00000076928	TR_C_gene	Trac	ENSMUST00000103740	TR_C_gene	principal1	14	1	54220521	413
ENSMUSG00000022110	protein_coding	Sucla2	ENSMUST00000161829	retained_intron		14	1	73568654	461
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000127882	retained_intron		11	-1	120625240	3274
ENSMUSG00000098912	processed_transcript	1500004A13Rik	ENSMUST00000183374	lincRNA		3	-1	88832487	891
ENSMUSG00000022110	protein_coding	Sucla2	ENSMUST00000159165	processed_transcript		14	1	73595406	538
ENSMUSG00000098912	processed_transcript	1500004A13Rik	ENSMUST00000184640	lincRNA		3	-1	88832368	610
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000200524	protein_coding	alternative2	3	1	152210482	2552
ENSMUSG00000043719	protein_coding	Col6a6	ENSMUST00000166431	protein_coding	alternative2	9	-1	105828085	7098
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000133625	retained_intron		11	-1	120624999	1925
ENSMUSG00000008658	protein_coding	Rbfox1	ENSMUST00000231194	protein_coding		16	1	7193747	1451
ENSMUSG00000102877	TEC	Gm38314	ENSMUST00000195709	TEC		9	1	105727785	625
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000198227	protein_coding	alternative2	3	1	152210492	3163
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182659	protein_coding	principal2	9	-1	107770996	3205
ENSMUSG00000008658	protein_coding	Rbfox1	ENSMUST00000231088	protein_coding		16	1	7224310	1295
ENSMUSG00000116395	TEC	Gm49499	ENSMUST00000229927	TEC		15	1	101316102	2437
ENSMUSG00000058952	protein_coding	Cfi	ENSMUST00000200206	protein_coding		3	1	129835884	651
ENSMUSG00000008658	protein_coding	Rbfox1	ENSMUST00000231031	protein_coding		16	1	7352970	558
ENSMUSG00000008658	protein_coding	Rbfox1	ENSMUST00000115841	protein_coding		16	1	6809222	1191
ENSMUSG00000022110	protein_coding	Sucla2	ENSMUST00000160507	protein_coding	principal1	14	1	73552665	2229
ENSMUSG00000098912	processed_transcript	1500004A13Rik	ENSMUST00000183966	lincRNA		3	-1	88832501	3743
ENSMUSG00000037813	protein_coding	D630003M21Rik	ENSMUST00000103121	protein_coding	alternative2	2	-1	158229222	4521
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000134255	retained_intron		11	-1	120625020	1868
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000172941	retained_intron		14	1	55578405	705
ENSMUSG00000009013	protein_coding	Dynll1	ENSMUST00000009157	protein_coding	principal1	5	-1	115300999	2030
ENSMUSG00000025510	protein_coding	Cd151	ENSMUST00000211522	retained_intron		7	1	141467392	426
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000196739	protein_coding	alternative2	3	1	152210498	2526
ENSMUSG00000074156	protein_coding	Ces1h	ENSMUST00000145041	protein_coding	principal1	8	-1	93379725	1870
ENSMUSG00000022110	protein_coding	Sucla2	ENSMUST00000162723	processed_transcript		14	1	73552632	1074
ENSMUSG00000009013	protein_coding	Dynll1	ENSMUST00000202980	retained_intron		5	-1	115300663	2242
ENSMUSG00000037813	protein_coding	D630003M21Rik	ENSMUST00000046944	protein_coding	principal3	2	-1	158229222	3910
ENSMUSG00000098912	processed_transcript	1500004A13Rik	ENSMUST00000185189	lincRNA		3	-1	88832512	1659
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000146809	protein_coding		11	-1	120620977	1218
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000150350	protein_coding	principal1	7	-1	45128761	1047
ENSMUSG00000110695	lincRNA	Gm45766	ENSMUST00000211900	lincRNA		8	-1	93437174	478
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000173544	retained_intron		14	1	55578456	1986
ENSMUSG00000009013	protein_coding	Dynll1	ENSMUST00000123292	processed_transcript		5	-1	115299435	539
ENSMUSG00000037813	protein_coding	D630003M21Rik	ENSMUST00000169335	protein_coding	alternative2	2	-1	158229222	3457
ENSMUSG00000081233	processed_pseudogene	Gm12857	ENSMUST00000117678	processed_pseudogene		4	1	118522018	592
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000154714	processed_transcript		11	-1	120619369	502
ENSMUSG00000009013	protein_coding	Dynll1	ENSMUST00000112090	protein_coding	principal1	5	-1	115300912	729
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000210931	protein_coding		7	-1	45126537	491
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000152331	processed_transcript		11	-1	120624990	544
ENSMUSG00000098912	processed_transcript	1500004A13Rik	ENSMUST00000183707	lincRNA		3	-1	88832547	6054
ENSMUSG00000009013	protein_coding	Dynll1	ENSMUST00000127552	processed_transcript		5	-1	115300879	528
ENSMUSG00000023945	protein_coding	Slc5a7	ENSMUST00000095712	protein_coding	principal1	17	-1	54299034	5180
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000130743	retained_intron		11	-1	120622802	726
ENSMUSG00000098912	processed_transcript	1500004A13Rik	ENSMUST00000184958	lincRNA		3	-1	88832377	823
ENSMUSG00000078957	antisense	1700060C20Rik	ENSMUST00000109506	antisense		2	1	158192008	605
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000153018	retained_intron		11	-1	120624992	1569
ENSMUSG00000080072	processed_pseudogene	Spin2-ps2	ENSMUST00000116186	processed_pseudogene		X	-1	74678045	778
ENSMUSG00000098912	processed_transcript	1500004A13Rik	ENSMUST00000184170	lincRNA		3	-1	88832458	576
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000174791	retained_intron		14	1	55578468	1092
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000222461	processed_transcript		12	1	98746968	2012
ENSMUSG00000009013	protein_coding	Dynll1	ENSMUST00000125959	retained_intron		5	-1	115300934	478
ENSMUSG00000023945	protein_coding	Slc5a7	ENSMUST00000233507	retained_intron		17	-1	54279204	4084
ENSMUSG00000025138	protein_coding	Sirt7	ENSMUST00000106183	protein_coding		11	-1	120624984	427
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000228834	retained_intron		14	1	55578475	600
ENSMUSG00000098912	processed_transcript	1500004A13Rik	ENSMUST00000184013	retained_intron		3	-1	88832531	2484
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000196062	nonsense_mediated_decay		3	1	152210514	2093
ENSMUSG00000083847	unprocessed_pseudogene	Xlr3d-ps	ENSMUST00000121687	unprocessed_pseudogene		X	1	74696047	658
ENSMUSG00000023945	protein_coding	Slc5a7	ENSMUST00000233758	protein_coding		17	-1	54298456	309
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000173388	retained_intron		14	1	55578486	600
ENSMUSG00000078684	unprocessed_pseudogene	5830417I10Rik	ENSMUST00000135913	unprocessed_pseudogene		3	1	88775216	6190
ENSMUSG00000036902	protein_coding	Neto2	ENSMUST00000209259	processed_transcript		8	-1	85691009	5323
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000196695	protein_coding	alternative2	3	1	152210519	2374
ENSMUSG00000062629	protein_coding	Olfr114	ENSMUST00000214871	protein_coding	principal1	17	-1	37592743	1256
ENSMUSG00000084047	processed_pseudogene	Gm14984	ENSMUST00000120343	processed_pseudogene		X	-1	130402219	1263
ENSMUSG00000062629	protein_coding	Olfr114	ENSMUST00000216249	protein_coding	principal1	17	-1	37592743	1457
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000174563	protein_coding		14	1	55578538	556
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000199876	nonsense_mediated_decay		3	1	152210519	4846
ENSMUSG00000046486	protein_coding	Olfr231	ENSMUST00000214446	protein_coding	principal1	1	-1	174121162	5204
ENSMUSG00000116709	lincRNA	Gm49722	ENSMUST00000232213	lincRNA		16	-1	92553143	342
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000172738	protein_coding		14	1	55578575	681
ENSMUSG00000054690	protein_coding	Emcn	ENSMUST00000122064	protein_coding	alternative2	3	1	137341067	2588
ENSMUSG00000046486	protein_coding	Olfr231	ENSMUST00000063030	protein_coding	principal1	1	-1	174118014	924
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000089619	protein_coding		14	1	55578575	711
ENSMUSG00000061518	protein_coding	Cox5b	ENSMUST00000081180	protein_coding		1	1	36691449	625
ENSMUSG00000118161	processed_pseudogene	Rps2-ps8	ENSMUST00000236305	processed_pseudogene		17	-1	31644779	882
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000057000	protein_coding	alternative2	12	1	98746983	3046
ENSMUSG00000062629	protein_coding	Olfr114	ENSMUST00000076914	protein_coding	principal1	17	-1	37590381	1000
ENSMUSG00000032246	protein_coding	Calml4	ENSMUST00000034777	protein_coding	principal1	9	1	62858104	864
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000174148	retained_intron		14	1	55579964	724
ENSMUSG00000007207	protein_coding	Stx1a	ENSMUST00000005509	protein_coding	principal1	5	1	135023482	2162
ENSMUSG00000110964	processed_pseudogene	Gm20953	ENSMUST00000216399	processed_pseudogene		9	-1	38940102	2614
ENSMUSG00000054690	protein_coding	Emcn	ENSMUST00000128985	retained_intron		3	1	137341090	3521
ENSMUSG00000110792	unprocessed_pseudogene	Olfr931-ps1	ENSMUST00000214941	unprocessed_pseudogene		9	-1	38945715	549
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000173113	retained_intron		14	1	55580034	471
ENSMUSG00000116114	antisense	Gm35853	ENSMUST00000229584	antisense		15	1	101322888	2534
ENSMUSG00000032246	protein_coding	Calml4	ENSMUST00000215119	retained_intron		9	1	62858114	2403
ENSMUSG00000007207	protein_coding	Stx1a	ENSMUST00000201008	protein_coding		5	1	135023507	550
ENSMUSG00000116114	antisense	Gm35853	ENSMUST00000230070	antisense		15	1	101352947	353
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000226395	protein_coding		14	1	47450421	613
ENSMUSG00000054690	protein_coding	Emcn	ENSMUST00000119475	protein_coding	principal3	3	1	137341143	1357
ENSMUSG00000022216	protein_coding	Psme1	ENSMUST00000174419	nonsense_mediated_decay		14	1	55580748	439
ENSMUSG00000027804	protein_coding	Ppid	ENSMUST00000029382	protein_coding	principal1	3	1	79591365	1752
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000200452	nonsense_mediated_decay		3	1	152210521	4525
ENSMUSG00000085669	processed_transcript	Gm14817	ENSMUST00000148522	processed_transcript		X	1	73795215	643
ENSMUSG00000023953	protein_coding	Polh	ENSMUST00000024749	protein_coding	principal1	17	-1	46202645	3238
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000209812	nonsense_mediated_decay		7	-1	45128723	690
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000199199	retained_intron		3	1	152217431	432
ENSMUSG00000061518	protein_coding	Cox5b	ENSMUST00000193210	protein_coding	principal1	1	1	36691484	865
ENSMUSG00000032246	protein_coding	Calml4	ENSMUST00000163820	protein_coding		9	1	62858121	699
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000211037	protein_coding		7	-1	45128702	449
ENSMUSG00000054690	protein_coding	Emcn	ENSMUST00000197511	protein_coding		3	1	137341174	723
ENSMUSG00000116114	antisense	Gm35853	ENSMUST00000229658	antisense		15	1	101364740	833
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000196429	protein_coding		3	1	152221363	585
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000205318	retained_intron		7	-1	80363462	4610
ENSMUSG00000116114	antisense	Gm35853	ENSMUST00000230887	antisense		15	1	101373352	688
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000199127	retained_intron		3	1	152221885	512
ENSMUSG00000027804	protein_coding	Ppid	ENSMUST00000162690	processed_transcript		3	1	79591488	407
ENSMUSG00000007207	protein_coding	Stx1a	ENSMUST00000150838	nonsense_mediated_decay		5	1	135023560	2167
ENSMUSG00000061518	protein_coding	Cox5b	ENSMUST00000195151	protein_coding		1	1	36691610	344
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000199918	protein_coding		3	1	152223298	796
ENSMUSG00000116114	antisense	Gm35853	ENSMUST00000229169	antisense		15	1	101376842	351
ENSMUSG00000083603	processed_pseudogene	Gm14810	ENSMUST00000121628	processed_pseudogene		X	-1	98544882	486
ENSMUSG00000027804	protein_coding	Ppid	ENSMUST00000159505	nonsense_mediated_decay		3	1	79593689	353
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000043112	protein_coding	principal3	14	1	47472561	2937
ENSMUSG00000023953	protein_coding	Polh	ENSMUST00000233438	nonsense_mediated_decay		17	-1	46202622	2130
ENSMUSG00000058952	protein_coding	Cfi	ENSMUST00000077918	protein_coding	principal1	3	1	129836737	2079
ENSMUSG00000027804	protein_coding	Ppid	ENSMUST00000161876	retained_intron		3	1	79596157	546
ENSMUSG00000032246	protein_coding	Calml4	ENSMUST00000215870	protein_coding		9	1	62858132	803
ENSMUSG00000023953	protein_coding	Polh	ENSMUST00000233924	retained_intron		17	-1	46195489	2927
ENSMUSG00000031104	protein_coding	Rab33a	ENSMUST00000033430	protein_coding	principal1	X	1	48519285	1158
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000161324	protein_coding		17	1	65782573	345
ENSMUSG00000061518	protein_coding	Cox5b	ENSMUST00000191790	retained_intron		1	1	36691628	757
ENSMUSG00000027804	protein_coding	Ppid	ENSMUST00000160799	retained_intron		3	1	79598709	512
ENSMUSG00000032246	protein_coding	Calml4	ENSMUST00000214633	protein_coding		9	1	62858132	394
ENSMUSG00000061518	protein_coding	Cox5b	ENSMUST00000192859	retained_intron		1	1	36691642	345
ENSMUSG00000033955	protein_coding	Tnks1bp1	ENSMUST00000048400	protein_coding	alternative2	2	1	85058159	4799
ENSMUSG00000115887	TEC	Gm49471	ENSMUST00000229249	TEC		15	1	79064661	1288
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000110105	protein_coding	principal4	12	1	98746989	3514
ENSMUSG00000033955	protein_coding	Tnks1bp1	ENSMUST00000238769	protein_coding		2	1	85060964	939
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000198405	protein_coding		3	1	152223311	800
ENSMUSG00000022217	protein_coding	Emc9	ENSMUST00000174352	protein_coding		14	-1	55584946	340
ENSMUSG00000055138	lincRNA	Gm4861	ENSMUST00000198629	lincRNA		3	-1	137552622	957
ENSMUSG00000103415	processed_pseudogene	Gm37339	ENSMUST00000194142	processed_pseudogene		1	1	183371076	392
ENSMUSG00000061518	protein_coding	Cox5b	ENSMUST00000193235	processed_transcript		1	1	36691644	362
ENSMUSG00000032246	protein_coding	Calml4	ENSMUST00000215968	protein_coding		9	1	62858134	526
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000200056	protein_coding		3	1	152223321	809
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000221558	retained_intron		12	1	98747000	3078
ENSMUSG00000111805	processed_pseudogene	Gm47274	ENSMUST00000216038	processed_pseudogene		9	1	62856066	397
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000223083	protein_coding		12	1	98747007	924
ENSMUSG00000082890	processed_pseudogene	Gm15014	ENSMUST00000120742	processed_pseudogene		X	1	142216471	258
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000198539	retained_intron		3	1	152224728	5099
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000210073	retained_intron		7	-1	45127823	992
ENSMUSG00000022217	protein_coding	Emc9	ENSMUST00000173169	retained_intron		14	-1	55582424	687
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000221576	retained_intron		12	1	98757187	1351
ENSMUSG00000046818	protein_coding	Ddit4l	ENSMUST00000167564	processed_transcript		3	1	137621612	241
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000197141	retained_intron		3	1	152225871	424
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000198046	retained_intron		3	1	152227305	4006
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000223451	nonsense_mediated_decay		12	1	98759843	727
ENSMUSG00000092413	protein_coding	Olfr115	ENSMUST00000221552	protein_coding	principal1	17	-1	37612051	2295
ENSMUSG00000033955	protein_coding	Tnks1bp1	ENSMUST00000111605	protein_coding	principal2	2	1	85050460	5747
ENSMUSG00000092413	protein_coding	Olfr115	ENSMUST00000223366	protein_coding	principal1	17	-1	37627109	2273
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000200207	retained_intron		3	1	152227841	665
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000210967	nonsense_mediated_decay		7	-1	45128720	658
ENSMUSG00000028034	protein_coding	Fubp1	ENSMUST00000106121	protein_coding	principal2	3	1	152210521	4525
ENSMUSG00000034480	protein_coding	Diaph2	ENSMUST00000127577	retained_intron		X	1	129749742	4480
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000228668	protein_coding		14	1	47472576	664
ENSMUSG00000109188	unprocessed_pseudogene	Gm18213	ENSMUST00000207850	unprocessed_pseudogene		17	-1	37609509	178
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000210792	retained_intron		7	-1	45126879	464
ENSMUSG00000090881	unprocessed_pseudogene	Phf11	ENSMUST00000224042	unprocessed_pseudogene		14	-1	59260180	603
ENSMUSG00000007207	protein_coding	Stx1a	ENSMUST00000133812	processed_transcript		5	1	135037511	655
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000209927	protein_coding		7	-1	45128702	552
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000227162	processed_transcript		14	1	47472589	373
ENSMUSG00000061336	protein_coding	Olfr116	ENSMUST00000216128	protein_coding	principal1	17	-1	37627199	4477
ENSMUSG00000083641	processed_pseudogene	Gm9225	ENSMUST00000121921	processed_pseudogene		X	1	110539337	836
ENSMUSG00000061336	protein_coding	Olfr116	ENSMUST00000072265	protein_coding	principal1	17	-1	37624633	966
ENSMUSG00000034480	protein_coding	Diaph2	ENSMUST00000143668	retained_intron		X	1	129749796	4208
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000209711	protein_coding		7	-1	45128626	495
ENSMUSG00000007207	protein_coding	Stx1a	ENSMUST00000156626	retained_intron		5	1	135041060	2114
ENSMUSG00000028536	protein_coding	2610528J11Rik	ENSMUST00000106367	protein_coding	principal1	4	1	118526999	736
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000227601	nonsense_mediated_decay		14	1	47472603	393
ENSMUSG00000022174	protein_coding	Dad1	ENSMUST00000022781	protein_coding	principal1	14	-1	54254104	878
ENSMUSG00000007207	protein_coding	Stx1a	ENSMUST00000144198	processed_transcript		5	1	135041266	594
ENSMUSG00000103999	TEC	Gm38026	ENSMUST00000193284	TEC		1	-1	128101470	3880
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000221532	protein_coding		12	1	98760374	983
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000209212	nonsense_mediated_decay		7	-1	45128702	514
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000210191	nonsense_mediated_decay		7	-1	45128736	562
ENSMUSG00000110849	unprocessed_pseudogene	CT025680.1	ENSMUST00000217375	unprocessed_pseudogene		9	1	38945914	375
ENSMUSG00000104164	TEC	Gm38248	ENSMUST00000193744	TEC		1	-1	127984687	5783
ENSMUSG00000046818	protein_coding	Ddit4l	ENSMUST00000053855	protein_coding	principal1	3	1	137623672	2722
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000021399	protein_coding		12	1	98771022	1430
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000209967	retained_intron		7	-1	45126911	470
ENSMUSG00000099760	antisense	Gm28800	ENSMUST00000186230	antisense		1	1	127959516	2243
ENSMUSG00000022450	protein_coding	Ndufa6	ENSMUST00000023085	protein_coding	principal1	15	-1	82354322	590
ENSMUSG00000037185	protein_coding	Krt80	ENSMUST00000230831	protein_coding		15	-1	101367713	3919
ENSMUSG00000058603	processed_pseudogene	Rpl28-ps1	ENSMUST00000121497	processed_pseudogene		1	1	128038569	414
ENSMUSG00000079071	protein_coding	Slc28a2b	ENSMUST00000110521	protein_coding	principal1	2	1	122484941	3740
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000209626	processed_transcript		7	-1	45128735	734
ENSMUSG00000102782	TEC	Gm37625	ENSMUST00000194969	TEC		1	-1	128089331	4872
ENSMUSG00000020362	protein_coding	Cnot6	ENSMUST00000145353	protein_coding	alternative1	11	-1	49712723	5736
ENSMUSG00000046818	protein_coding	Ddit4l	ENSMUST00000165845	protein_coding		3	1	137624037	446
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000209815	protein_coding		7	-1	45128702	503
ENSMUSG00000028536	protein_coding	2610528J11Rik	ENSMUST00000030261	protein_coding	principal1	4	1	118527243	958
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000222146	retained_intron		12	1	98783331	895
ENSMUSG00000036902	protein_coding	Neto2	ENSMUST00000209479	protein_coding	alternative1	8	-1	85700754	4936
ENSMUSG00000105325	processed_pseudogene	Gm30946	ENSMUST00000198288	processed_pseudogene		3	-1	137644781	724
ENSMUSG00000022174	protein_coding	Dad1	ENSMUST00000128231	protein_coding	principal1	14	-1	54253914	3491
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000210918	protein_coding		7	-1	45128737	389
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000222632	retained_intron		12	1	98784836	687
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000211494	processed_transcript		7	-1	45126987	176
ENSMUSG00000022217	protein_coding	Emc9	ENSMUST00000022828	protein_coding	principal1	14	-1	55585302	855
ENSMUSG00000079071	protein_coding	Slc28a2b	ENSMUST00000132215	retained_intron		2	1	122485917	1619
ENSMUSG00000106122	lincRNA	Gm42610	ENSMUST00000196557	lincRNA		3	1	137690987	650
ENSMUSG00000036902	protein_coding	Neto2	ENSMUST00000216286	protein_coding	principal5	8	-1	85700924	2932
ENSMUSG00000118579	unprocessed_pseudogene	AC162945.1	ENSMUST00000239350	unprocessed_pseudogene		8	-1	93486747	344
ENSMUSG00000021012	protein_coding	Zc3h14	ENSMUST00000220660	nonsense_mediated_decay		12	1	98784952	598
ENSMUSG00000036902	protein_coding	Neto2	ENSMUST00000215046	processed_transcript		8	-1	85690973	1662
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000211438	retained_intron		7	-1	45128735	503
ENSMUSG00000032077	protein_coding	Bud13	ENSMUST00000138498	retained_intron		9	1	46283008	3413
ENSMUSG00000022450	protein_coding	Ndufa6	ENSMUST00000230589	retained_intron		15	-1	82351207	440
ENSMUSG00000105427	lincRNA	Gm31678	ENSMUST00000198262	lincRNA		3	-1	137803469	454
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000210134	retained_intron		7	-1	45128702	514
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000168833	protein_coding	alternative2	14	1	47472619	2993
ENSMUSG00000113341	TEC	9430031K09Rik	ENSMUST00000222913	TEC		12	1	98762048	925
ENSMUSG00000022450	protein_coding	Ndufa6	ENSMUST00000230676	protein_coding		15	-1	82353345	300
ENSMUSG00000074129	protein_coding	Rpl13a	ENSMUST00000209965	processed_transcript		7	-1	45128153	399
ENSMUSG00000105676	antisense	Gm43403	ENSMUST00000198011	antisense		3	-1	137864374	1786
ENSMUSG00000022217	protein_coding	Emc9	ENSMUST00000174618	retained_intron		14	-1	55585211	1682
ENSMUSG00000020362	protein_coding	Cnot6	ENSMUST00000109183	processed_transcript		11	-1	49702632	2241
ENSMUSG00000113852	TEC	Gm48062	ENSMUST00000221902	TEC		12	1	98794448	2622
ENSMUSG00000105676	antisense	Gm43403	ENSMUST00000198830	antisense		3	-1	137864183	370
ENSMUSG00000036902	protein_coding	Neto2	ENSMUST00000109686	protein_coding		8	-1	85690973	5610
ENSMUSG00000002006	protein_coding	Pdzd4	ENSMUST00000002080	protein_coding	principal3	X	-1	73824969	3970
ENSMUSG00000020362	protein_coding	Cnot6	ENSMUST00000145424	processed_transcript		11	-1	49680401	600
ENSMUSG00000022450	protein_coding	Ndufa6	ENSMUST00000230494	protein_coding		15	-1	82354254	382
ENSMUSG00000112822	TEC	A130012E19Rik	ENSMUST00000218674	TEC		10	1	115394750	3135
ENSMUSG00000002006	protein_coding	Pdzd4	ENSMUST00000114438	protein_coding	alternative2	X	-1	73824969	3625
ENSMUSG00000020362	protein_coding	Cnot6	ENSMUST00000151090	processed_transcript		11	-1	49682725	830
ENSMUSG00000073293	protein_coding	Nudt10	ENSMUST00000103006	protein_coding	principal1	X	-1	6173015	1775
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000210832	processed_transcript		7	-1	45136087	462
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000210175	processed_transcript		7	-1	45131757	560
ENSMUSG00000117006	processed_pseudogene	Gm9224	ENSMUST00000233783	processed_pseudogene		17	-1	54347593	1054
ENSMUSG00000105207	processed_pseudogene	Gm42927	ENSMUST00000200624	processed_pseudogene		3	-1	120739561	3841
ENSMUSG00000022450	protein_coding	Ndufa6	ENSMUST00000229427	retained_intron		15	-1	82352446	432
ENSMUSG00000040836	protein_coding	Gpr161	ENSMUST00000178700	protein_coding		1	1	165295789	1827
ENSMUSG00000020362	protein_coding	Cnot6	ENSMUST00000020624	protein_coding	principal3	11	-1	49712710	2498
ENSMUSG00000022450	protein_coding	Ndufa6	ENSMUST00000229537	nonsense_mediated_decay		15	-1	82354189	528
ENSMUSG00000099747	lincRNA	1700025K24Rik	ENSMUST00000190635	lincRNA		17	-1	54370074	740
ENSMUSG00000111547	TEC	Gm48069	ENSMUST00000217520	TEC		9	-1	20607616	1484
ENSMUSG00000022450	protein_coding	Ndufa6	ENSMUST00000229283	retained_intron		15	-1	82354237	1141
ENSMUSG00000117149	processed_pseudogene	Gm49919	ENSMUST00000233768	processed_pseudogene		17	-1	54355159	442
ENSMUSG00000062470	antisense	Fbxl12os	ENSMUST00000215582	antisense		9	1	20607458	3040
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000211503	processed_transcript		7	-1	45136417	416
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000228019	nonsense_mediated_decay		14	1	47472624	3490
ENSMUSG00000110110	lincRNA	Gm30978	ENSMUST00000211581	lincRNA		8	-1	25429224	1066
ENSMUSG00000062470	antisense	Fbxl12os	ENSMUST00000136376	antisense		9	1	20607481	2349
ENSMUSG00000008999	protein_coding	Bmp7	ENSMUST00000009143	protein_coding	principal1	2	-1	172940321	3670
ENSMUSG00000110172	transcribed_processed_pseudogene	Gm39147	ENSMUST00000211730	processed_transcript		8	1	25399020	882
ENSMUSG00000040836	protein_coding	Gpr161	ENSMUST00000111450	protein_coding	principal1	1	1	165302623	6862
ENSMUSG00000062470	antisense	Fbxl12os	ENSMUST00000138471	antisense		9	1	20607668	2127
ENSMUSG00000110172	transcribed_processed_pseudogene	Gm39147	ENSMUST00000211376	transcribed_processed_pseudogene		8	1	25426852	465
ENSMUSG00000062470	antisense	Fbxl12os	ENSMUST00000170938	antisense		9	1	20607816	431
ENSMUSG00000062470	antisense	Fbxl12os	ENSMUST00000054947	antisense		9	1	20614731	1166
ENSMUSG00000008999	protein_coding	Bmp7	ENSMUST00000137247	retained_intron		2	-1	172940092	980
ENSMUSG00000083126	processed_pseudogene	Gm14109	ENSMUST00000118814	processed_pseudogene		2	-1	147403262	309
ENSMUSG00000007739	protein_coding	Cct4	ENSMUST00000173867	protein_coding	principal1	11	1	22990519	2484
ENSMUSG00000037185	protein_coding	Krt80	ENSMUST00000077196	protein_coding	principal1	15	-1	101370162	3067
ENSMUSG00000080844	processed_pseudogene	Gm14107	ENSMUST00000117774	processed_pseudogene		2	-1	147643177	330
ENSMUSG00000081211	processed_pseudogene	Gm14886	ENSMUST00000117208	processed_pseudogene		X	1	110604497	2629
ENSMUSG00000081741	processed_pseudogene	Gm14106	ENSMUST00000119382	processed_pseudogene		2	1	147668015	438
ENSMUSG00000109088	lincRNA	Gm44593	ENSMUST00000208372	lincRNA		X	-1	110812324	1249
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000095941	protein_coding	alternative2	14	1	47472634	3418
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000072997	protein_coding	principal4	2	1	153649450	4208
ENSMUSG00000037185	protein_coding	Krt80	ENSMUST00000230909	protein_coding		15	-1	101364578	2811
ENSMUSG00000035148	protein_coding	Gpr33	ENSMUST00000040161	protein_coding	principal1	12	-1	52028063	1388
ENSMUSG00000007739	protein_coding	Cct4	ENSMUST00000173853	nonsense_mediated_decay		11	1	22990626	465
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000109773	protein_coding	alternative2	2	1	153649450	4148
ENSMUSG00000037185	protein_coding	Krt80	ENSMUST00000230107	retained_intron		15	-1	101370162	2487
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000226954	nonsense_mediated_decay		14	1	47472651	505
ENSMUSG00000112063	processed_pseudogene	Gm32220	ENSMUST00000218420	processed_pseudogene		12	1	52079014	298
ENSMUSG00000037185	protein_coding	Krt80	ENSMUST00000229267	processed_transcript		15	-1	101368514	345
ENSMUSG00000023279	protein_coding	Bmp15	ENSMUST00000024049	protein_coding	principal1	X	-1	6320721	3060
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000228740	protein_coding		14	1	47473117	354
ENSMUSG00000007739	protein_coding	Cct4	ENSMUST00000174244	retained_intron		11	1	22990639	1736
ENSMUSG00000106005	antisense	Gm29151	ENSMUST00000196669	antisense		3	1	116350103	2513
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000226432	protein_coding		14	1	47474177	594
ENSMUSG00000051986	lincRNA	A530006G24Rik	ENSMUST00000152542	lincRNA		2	1	147710693	1331
ENSMUSG00000110399	lincRNA	Gm45238	ENSMUST00000210204	lincRNA		8	-1	25454107	517
ENSMUSG00000116116	antisense	Gm671	ENSMUST00000231016	antisense		15	-1	101412311	777
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000228634	retained_intron		14	1	47526079	338
ENSMUSG00000007739	protein_coding	Cct4	ENSMUST00000174047	nonsense_mediated_decay		11	1	22990650	581
ENSMUSG00000110017	lincRNA	Gm45237	ENSMUST00000211673	lincRNA		8	1	25440618	302
ENSMUSG00000056854	protein_coding	Pou3f4	ENSMUST00000078229	protein_coding	principal1	X	1	110814280	2928
ENSMUSG00000007739	protein_coding	Cct4	ENSMUST00000020562	protein_coding		11	1	22990650	1634
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000163324	protein_coding	alternative2	14	1	47472561	3132
ENSMUSG00000071203	protein_coding	Naip5	ENSMUST00000049789	protein_coding	principal1	13	-1	100246323	5204
ENSMUSG00000023039	protein_coding	Krt7	ENSMUST00000141190	processed_transcript		15	1	101411043	690
ENSMUSG00000020828	protein_coding	Pld2	ENSMUST00000157075	protein_coding		11	1	70540064	376
ENSMUSG00000023039	protein_coding	Krt7	ENSMUST00000153021	processed_transcript		15	1	101411052	351
ENSMUSG00000058515	protein_coding	Olfr933	ENSMUST00000216238	protein_coding	principal1	9	1	38972313	4475
ENSMUSG00000037536	protein_coding	Fbxo34	ENSMUST00000165714	protein_coding	alternative2	14	1	47507352	3159
ENSMUSG00000007739	protein_coding	Cct4	ENSMUST00000174659	nonsense_mediated_decay		11	1	22990652	489
ENSMUSG00000020248	protein_coding	Nfyb	ENSMUST00000130911	protein_coding	principal1	10	-1	82764144	2554
ENSMUSG00000115570	TEC	Gm48986	ENSMUST00000228735	TEC		14	1	47491568	1216
ENSMUSG00000007739	protein_coding	Cct4	ENSMUST00000174746	retained_intron		11	1	22995624	627
ENSMUSG00000007739	protein_coding	Cct4	ENSMUST00000145912	processed_transcript		11	1	23000937	596
ENSMUSG00000058515	protein_coding	Olfr933	ENSMUST00000075680	protein_coding	principal1	9	1	38975651	1003
ENSMUSG00000073001	protein_coding	Cylc1	ENSMUST00000210720	protein_coding	alternative2	X	1	111110418	1969
ENSMUSG00000110017	lincRNA	Gm45237	ENSMUST00000211081	lincRNA		8	1	25440981	438
ENSMUSG00000084349	processed_pseudogene	Rpl3-ps1	ENSMUST00000120557	processed_pseudogene		X	1	13202571	1210
ENSMUSG00000110017	lincRNA	Gm45237	ENSMUST00000211157	lincRNA		8	1	25441192	2452
ENSMUSG00000007739	protein_coding	Cct4	ENSMUST00000174689	retained_intron		11	1	23001934	507
ENSMUSG00000073001	protein_coding	Cylc1	ENSMUST00000101282	protein_coding	principal2	X	1	111110458	1923
ENSMUSG00000083364	processed_pseudogene	Llph-ps2	ENSMUST00000122000	processed_pseudogene		X	-1	13218602	393
ENSMUSG00000098097	lincRNA	6530403H02Rik	ENSMUST00000182124	lincRNA		3	-1	120886733	3191
ENSMUSG00000025510	protein_coding	Cd151	ENSMUST00000106000	protein_coding	principal1	7	1	141467393	1865
ENSMUSG00000098097	lincRNA	6530403H02Rik	ENSMUST00000183276	lincRNA		3	-1	120886732	659
ENSMUSG00000086141	lincRNA	9030622O22Rik	ENSMUST00000129082	lincRNA		2	-1	147976185	1245
ENSMUSG00000098097	lincRNA	6530403H02Rik	ENSMUST00000183168	lincRNA		3	-1	120886714	843
ENSMUSG00000097546	antisense	Gm26749	ENSMUST00000181387	antisense		17	-1	74617119	1933
ENSMUSG00000098097	lincRNA	6530403H02Rik	ENSMUST00000182099	lincRNA		3	-1	120886691	402
ENSMUSG00000086141	lincRNA	9030622O22Rik	ENSMUST00000136555	lincRNA		2	-1	148040203	469
ENSMUSG00000020248	protein_coding	Nfyb	ENSMUST00000143749	retained_intron		10	-1	82764101	3722
ENSMUSG00000025510	protein_coding	Cd151	ENSMUST00000209892	protein_coding		7	1	141467422	658
ENSMUSG00000020248	protein_coding	Nfyb	ENSMUST00000145561	retained_intron		10	-1	82751659	620
ENSMUSG00000110160	TEC	Gm45560	ENSMUST00000211492	TEC		8	1	12390168	1472
ENSMUSG00000020248	protein_coding	Nfyb	ENSMUST00000129640	retained_intron		10	-1	82752550	444
ENSMUSG00000086141	lincRNA	9030622O22Rik	ENSMUST00000132070	lincRNA		2	-1	148038270	559
ENSMUSG00000029468	protein_coding	P2rx7	ENSMUST00000100737	protein_coding	principal1	5	1	122643911	4936
ENSMUSG00000025510	protein_coding	Cd151	ENSMUST00000177840	protein_coding	principal1	7	1	141467422	1708
ENSMUSG00000020248	protein_coding	Nfyb	ENSMUST00000127832	processed_transcript		10	-1	82763663	569
ENSMUSG00000020248	protein_coding	Nfyb	ENSMUST00000142523	protein_coding		10	-1	82763646	581
ENSMUSG00000057424	protein_coding	Olfr934	ENSMUST00000216823	protein_coding	principal1	9	-1	38988282	2440
ENSMUSG00000020248	protein_coding	Nfyb	ENSMUST00000128397	retained_intron		10	-1	82757307	634
ENSMUSG00000057424	protein_coding	Olfr934	ENSMUST00000214324	protein_coding	principal1	9	-1	38988315	2462
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000098666	protein_coding	alternative2	7	-1	25477603	3656
ENSMUSG00000025510	protein_coding	Cd151	ENSMUST00000209698	retained_intron		7	1	141467438	828
ENSMUSG00000057424	protein_coding	Olfr934	ENSMUST00000074211	protein_coding	principal1	9	-1	38983042	933
ENSMUSG00000029468	protein_coding	P2rx7	ENSMUST00000121489	protein_coding		5	1	122643911	2576
ENSMUSG00000025510	protein_coding	Cd151	ENSMUST00000209988	protein_coding		7	1	141467533	511
ENSMUSG00000023039	protein_coding	Krt7	ENSMUST00000147662	protein_coding		15	1	101411103	642
ENSMUSG00000047935	sense_overlapping	Sox1ot	ENSMUST00000186174	sense_overlapping		8	1	12385771	7420
ENSMUSG00000025510	protein_coding	Cd151	ENSMUST00000211071	protein_coding		7	1	141468278	695
ENSMUSG00000047935	sense_overlapping	Sox1ot	ENSMUST00000080795	sense_overlapping		8	1	12385771	5064
ENSMUSG00000040533	protein_coding	Matn1	ENSMUST00000102576	protein_coding	principal1	4	1	130944385	2001
ENSMUSG00000095286	protein_coding	Olfr117	ENSMUST00000215414	protein_coding	principal1	17	-1	37663775	3498
ENSMUSG00000024975	protein_coding	Pdcd4	ENSMUST00000074371	protein_coding	principal1	19	1	53892231	2408
ENSMUSG00000032077	protein_coding	Bud13	ENSMUST00000074957	protein_coding	principal1	9	1	46283008	2539
ENSMUSG00000029468	protein_coding	P2rx7	ENSMUST00000031425	protein_coding		5	1	122643939	1605
ENSMUSG00000095286	protein_coding	Olfr117	ENSMUST00000213638	protein_coding	principal1	17	-1	37663782	3183
ENSMUSG00000113872	processed_pseudogene	Gm47474	ENSMUST00000221247	processed_pseudogene		12	-1	112873531	415
ENSMUSG00000015476	protein_coding	Prrt1	ENSMUST00000015620	protein_coding	principal1	17	1	34629533	1940
ENSMUSG00000024975	protein_coding	Pdcd4	ENSMUST00000235854	processed_transcript		19	1	53892236	538
ENSMUSG00000095286	protein_coding	Olfr117	ENSMUST00000073636	protein_coding	principal1	17	-1	37660331	954
ENSMUSG00000025510	protein_coding	Cd151	ENSMUST00000058746	protein_coding	principal1	7	1	141468822	1619
ENSMUSG00000032077	protein_coding	Bud13	ENSMUST00000124887	nonsense_mediated_decay		9	1	46288247	825
ENSMUSG00000024975	protein_coding	Pdcd4	ENSMUST00000237699	processed_transcript		19	1	53893830	528
ENSMUSG00000110099	processed_pseudogene	Gm45344	ENSMUST00000211610	processed_pseudogene		7	1	101338127	341
ENSMUSG00000025510	protein_coding	Cd151	ENSMUST00000210058	retained_intron		7	1	141468829	830
ENSMUSG00000032077	protein_coding	Bud13	ENSMUST00000154247	retained_intron		9	1	46288269	583
ENSMUSG00000047730	protein_coding	Fcgbp	ENSMUST00000138392	protein_coding	alternative2	7	1	28071236	7926
ENSMUSG00000080990	protein_coding	Olfr118	ENSMUST00000216551	protein_coding	principal1	17	1	37667768	1772
ENSMUSG00000025510	protein_coding	Cd151	ENSMUST00000210308	retained_intron		7	1	141470383	646
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000109774	protein_coding	principal4	2	1	153649453	4320
ENSMUSG00000032077	protein_coding	Bud13	ENSMUST00000213338	processed_transcript		9	1	46288382	436
ENSMUSG00000080990	protein_coding	Olfr118	ENSMUST00000215811	protein_coding	principal1	17	1	37666988	1742
ENSMUSG00000073787	processed_transcript	Gm10575	ENSMUST00000167900	processed_transcript		7	-1	141465508	224
ENSMUSG00000047730	protein_coding	Fcgbp	ENSMUST00000140004	retained_intron		7	1	28071578	3553
ENSMUSG00000024975	protein_coding	Pdcd4	ENSMUST00000025931	protein_coding	principal1	19	1	53903299	2381
ENSMUSG00000073787	processed_transcript	Gm10575	ENSMUST00000097947	processed_transcript		7	-1	141467771	1671
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000081628	protein_coding	alternative2	2	1	153649453	4260
ENSMUSG00000092364	antisense	Gm20476	ENSMUST00000172644	antisense		7	-1	101326231	492
ENSMUSG00000029468	protein_coding	P2rx7	ENSMUST00000086247	protein_coding		5	1	122644009	712
ENSMUSG00000080990	protein_coding	Olfr118	ENSMUST00000122036	protein_coding	principal1	17	1	37672025	966
ENSMUSG00000032077	protein_coding	Bud13	ENSMUST00000213932	protein_coding		9	1	46291348	978
ENSMUSG00000015476	protein_coding	Prrt1	ENSMUST00000172945	retained_intron		17	1	34631404	866
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000103151	protein_coding	alternative2	2	1	153649453	3956
ENSMUSG00000024975	protein_coding	Pdcd4	ENSMUST00000237060	nonsense_mediated_decay		19	1	53903375	1623
ENSMUSG00000073787	processed_transcript	Gm10575	ENSMUST00000163674	processed_transcript		7	-1	141463904	622
ENSMUSG00000029468	protein_coding	P2rx7	ENSMUST00000199281	processed_transcript		5	1	122644165	480
ENSMUSG00000073787	processed_transcript	Gm10575	ENSMUST00000211564	retained_intron		7	-1	141465031	2116
ENSMUSG00000082090	processed_pseudogene	Gm16481	ENSMUST00000119074	processed_pseudogene		X	1	13238327	1227
ENSMUSG00000096014	protein_coding	Sox1	ENSMUST00000180353	protein_coding	principal1	8	1	12395295	4832
ENSMUSG00000029468	protein_coding	P2rx7	ENSMUST00000199371	protein_coding		5	1	122650424	1848
ENSMUSG00000059595	protein_coding	Olfr935	ENSMUST00000214157	protein_coding	principal1	9	-1	38999683	1693
ENSMUSG00000024975	protein_coding	Pdcd4	ENSMUST00000165617	protein_coding	principal1	19	1	53903416	1733
ENSMUSG00000029468	protein_coding	P2rx7	ENSMUST00000197102	processed_transcript		5	1	122681942	433
ENSMUSG00000059595	protein_coding	Olfr935	ENSMUST00000080748	protein_coding	principal1	9	-1	38995433	927
ENSMUSG00000047730	protein_coding	Fcgbp	ENSMUST00000148946	retained_intron		7	1	28100809	4629
ENSMUSG00000029468	protein_coding	P2rx7	ENSMUST00000197042	retained_intron		5	1	122682182	2103
ENSMUSG00000037706	protein_coding	Cd81	ENSMUST00000037941	protein_coding	principal1	7	1	143052739	1533
ENSMUSG00000047730	protein_coding	Fcgbp	ENSMUST00000154481	retained_intron		7	1	28113827	1123
ENSMUSG00000100714	lincRNA	2010308F09Rik	ENSMUST00000186827	lincRNA		X	-1	13236283	472
ENSMUSG00000117981	antisense	4930484I04Rik	ENSMUST00000237486	antisense		19	-1	54001442	808
ENSMUSG00000047730	protein_coding	Fcgbp	ENSMUST00000131090	processed_transcript		7	1	28115614	931
ENSMUSG00000117981	antisense	4930484I04Rik	ENSMUST00000237905	antisense		19	-1	54001407	369
ENSMUSG00000027347	protein_coding	Rasgrp1	ENSMUST00000102534	protein_coding	principal1	2	-1	117343001	5229
ENSMUSG00000047730	protein_coding	Fcgbp	ENSMUST00000076648	protein_coding	principal2	7	1	28071236	7928
ENSMUSG00000100714	lincRNA	2010308F09Rik	ENSMUST00000186931	lincRNA		X	-1	13247736	578
ENSMUSG00000102175	processed_pseudogene	Gm6119	ENSMUST00000193443	processed_pseudogene		1	-1	4693424	1206
ENSMUSG00000072258	protein_coding	Taf1a	ENSMUST00000192076	protein_coding		1	1	183388985	1254
ENSMUSG00000110063	lincRNA	Gm31045	ENSMUST00000211266	lincRNA		8	-1	25487585	922
ENSMUSG00000103265	processed_pseudogene	Gm2053	ENSMUST00000195671	processed_pseudogene		1	-1	4735676	631
ENSMUSG00000059964	protein_coding	Olfr119	ENSMUST00000213732	protein_coding	principal1	17	1	37696564	1722
ENSMUSG00000084058	processed_pseudogene	Gm15263	ENSMUST00000121556	processed_pseudogene		3	1	94832977	642
ENSMUSG00000027347	protein_coding	Rasgrp1	ENSMUST00000174770	nonsense_mediated_decay		2	-1	117342709	2138
ENSMUSG00000057667	protein_coding	Bloc1s3	ENSMUST00000077408	protein_coding	principal1	7	-1	19508367	3188
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000188119	retained_intron		6	-1	125169284	894
ENSMUSG00000037706	protein_coding	Cd81	ENSMUST00000128762	retained_intron		7	1	143052794	793
ENSMUSG00000027347	protein_coding	Rasgrp1	ENSMUST00000173541	protein_coding		2	-1	117342709	2283
ENSMUSG00000092525	lincRNA	Gm20461	ENSMUST00000174600	lincRNA		17	-1	34643977	305
ENSMUSG00000081934	processed_pseudogene	Gm12193	ENSMUST00000117250	processed_pseudogene		11	1	49776499	379
ENSMUSG00000028158	protein_coding	Mttp	ENSMUST00000029805	protein_coding	principal1	3	-1	138131377	3963
ENSMUSG00000072258	protein_coding	Taf1a	ENSMUST00000195798	protein_coding		1	1	183408609	1119
ENSMUSG00000059964	protein_coding	Olfr119	ENSMUST00000080483	protein_coding	principal1	17	1	37696664	1541
ENSMUSG00000027347	protein_coding	Rasgrp1	ENSMUST00000172901	protein_coding		2	-1	117342709	1903
ENSMUSG00000037706	protein_coding	Cd81	ENSMUST00000207448	protein_coding		7	1	143053273	425
ENSMUSG00000027347	protein_coding	Rasgrp1	ENSMUST00000173252	protein_coding		2	-1	117342709	1750
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000088976	protein_coding	alternative2	2	1	153649454	4130
ENSMUSG00000037706	protein_coding	Cd81	ENSMUST00000141954	protein_coding		7	1	143058576	586
ENSMUSG00000072258	protein_coding	Taf1a	ENSMUST00000097043	protein_coding	principal1	1	1	183388981	1472
ENSMUSG00000026914	protein_coding	Psmd14	ENSMUST00000028278	protein_coding	principal1	2	1	61711694	1541
ENSMUSG00000067189	processed_pseudogene	Gm7335	ENSMUST00000172475	processed_pseudogene		17	-1	37713924	373
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000109772	protein_coding	alternative2	2	1	153649454	4015
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000103150	protein_coding	alternative2	2	1	153649454	4070
ENSMUSG00000037706	protein_coding	Cd81	ENSMUST00000208278	retained_intron		7	1	143064674	1607
ENSMUSG00000027347	protein_coding	Rasgrp1	ENSMUST00000110898	retained_intron		2	-1	117342925	1260
ENSMUSG00000026914	protein_coding	Psmd14	ENSMUST00000139475	processed_transcript		2	1	61711780	337
ENSMUSG00000028158	protein_coding	Mttp	ENSMUST00000098580	protein_coding		3	-1	138143388	3072
ENSMUSG00000037706	protein_coding	Cd81	ENSMUST00000132303	retained_intron		7	1	143066201	943
ENSMUSG00000063994	protein_coding	Olfr120	ENSMUST00000207771	protein_coding	principal1	17	1	37721808	1625
ENSMUSG00000026914	protein_coding	Psmd14	ENSMUST00000153683	processed_transcript		2	1	61711791	741
ENSMUSG00000027347	protein_coding	Rasgrp1	ENSMUST00000178884	protein_coding	principal1	2	-1	117342877	5104
ENSMUSG00000063994	protein_coding	Olfr120	ENSMUST00000077498	protein_coding		17	1	37725999	993
ENSMUSG00000023039	protein_coding	Krt7	ENSMUST00000068904	protein_coding	principal1	15	1	101412402	4094
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000098346	protein_coding	principal1	7	-1	80371375	6554
ENSMUSG00000059277	processed_transcript	R74862	ENSMUST00000133630	processed_transcript		7	-1	143053417	2482
ENSMUSG00000086484	antisense	Nron	ENSMUST00000156297	antisense		2	1	33805816	3340
ENSMUSG00000028158	protein_coding	Mttp	ENSMUST00000197680	retained_intron		3	-1	138144968	2012
ENSMUSG00000026914	protein_coding	Psmd14	ENSMUST00000146051	processed_transcript		2	1	61711760	704
ENSMUSG00000059277	processed_transcript	R74862	ENSMUST00000155952	processed_transcript		7	-1	143053686	2219
ENSMUSG00000059277	processed_transcript	R74862	ENSMUST00000131129	processed_transcript		7	-1	143053677	1682
ENSMUSG00000086484	antisense	Nron	ENSMUST00000151761	antisense		2	1	33805828	2505
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000206807	nonsense_mediated_decay		7	-1	80359745	1607
ENSMUSG00000026914	protein_coding	Psmd14	ENSMUST00000135265	processed_transcript		2	1	61711742	540
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000109771	protein_coding	alternative2	2	1	153649617	3630
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000161127	protein_coding		17	1	65782780	775
ENSMUSG00000100320	antisense	Gm29417	ENSMUST00000188160	antisense		18	-1	35831093	571
ENSMUSG00000026914	protein_coding	Psmd14	ENSMUST00000134658	processed_transcript		2	1	61715823	525
ENSMUSG00000086484	antisense	Nron	ENSMUST00000140412	antisense		2	1	33805859	849
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000206066	retained_intron		7	-1	80363672	3190
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000206973	retained_intron		7	-1	80359911	537
ENSMUSG00000023039	protein_coding	Krt7	ENSMUST00000131069	retained_intron		15	1	101412449	3563
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000132132	retained_intron		2	1	153665802	756
ENSMUSG00000116030	processed_pseudogene	Gm49500	ENSMUST00000229091	processed_pseudogene		15	-1	101404433	382
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000140811	retained_intron		2	1	153669370	600
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000205853	nonsense_mediated_decay		7	-1	80363500	747
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000206301	nonsense_mediated_decay		7	-1	80370861	3007
ENSMUSG00000037025	protein_coding	Foxa2	ENSMUST00000109964	protein_coding	alternative1	2	-1	148045948	2070
ENSMUSG00000026914	protein_coding	Psmd14	ENSMUST00000154627	processed_transcript		2	1	61765386	567
ENSMUSG00000027478	protein_coding	Dnmt3b	ENSMUST00000056495	protein_coding	alternative2	2	1	153649454	4318
ENSMUSG00000097139	antisense	Gm26626	ENSMUST00000180989	antisense		16	1	92612814	796
ENSMUSG00000026914	protein_coding	Psmd14	ENSMUST00000125388	processed_transcript		2	1	61776578	560
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000098669	protein_coding	principal3	7	-1	25477573	2873
ENSMUSG00000079000	antisense	Dnmt3bos	ENSMUST00000124988	antisense		2	-1	153650286	718
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000205535	retained_intron		7	-1	80371126	4020
ENSMUSG00000034163	protein_coding	Zfc3h1	ENSMUST00000036044	protein_coding	principal1	10	1	115384959	6957
ENSMUSG00000024539	protein_coding	Ptpn2	ENSMUST00000120934	protein_coding	alternative2	18	-1	67724573	1497
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000206917	retained_intron		7	-1	80363660	783
ENSMUSG00000042271	protein_coding	Nxt2	ENSMUST00000112916	protein_coding		X	1	142226770	2532
ENSMUSG00000005102	protein_coding	Eif2ak4	ENSMUST00000005233	protein_coding	principal1	2	1	118388618	5212
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000206212	protein_coding		7	-1	80370858	262
ENSMUSG00000115767	antisense	Gm10366	ENSMUST00000226346	antisense		14	-1	54464742	1701
ENSMUSG00000037025	protein_coding	Foxa2	ENSMUST00000047315	protein_coding	principal3	2	-1	148046969	2128
ENSMUSG00000045438	protein_coding	Cox19	ENSMUST00000049630	protein_coding	principal1	5	-1	139345233	2461
ENSMUSG00000038886	protein_coding	Man2a2	ENSMUST00000205436	protein_coding		7	-1	80371082	431
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000211429	protein_coding	alternative2	7	-1	45136285	1358
ENSMUSG00000005102	protein_coding	Eif2ak4	ENSMUST00000110874	protein_coding		2	1	118388847	5298
ENSMUSG00000042271	protein_coding	Nxt2	ENSMUST00000042329	protein_coding	principal1	X	1	142227937	2447
ENSMUSG00000045438	protein_coding	Cox19	ENSMUST00000197520	processed_transcript		5	-1	139345177	660
ENSMUSG00000037025	protein_coding	Foxa2	ENSMUST00000172928	protein_coding		2	-1	148046896	865
ENSMUSG00000031221	protein_coding	Igbp1	ENSMUST00000033570	protein_coding	principal1	X	1	100494291	1518
ENSMUSG00000005102	protein_coding	Eif2ak4	ENSMUST00000110872	protein_coding		2	1	118389112	4907
ENSMUSG00000005102	protein_coding	Eif2ak4	ENSMUST00000110870	protein_coding		2	1	118412346	5116
ENSMUSG00000045438	protein_coding	Cox19	ENSMUST00000145125	processed_transcript		5	-1	139339575	654
ENSMUSG00000037025	protein_coding	Foxa2	ENSMUST00000146242	processed_transcript		2	-1	148045464	775
ENSMUSG00000005102	protein_coding	Eif2ak4	ENSMUST00000110877	protein_coding		2	1	118388618	2134
ENSMUSG00000031221	protein_coding	Igbp1	ENSMUST00000144881	retained_intron		X	1	100494355	4695
ENSMUSG00000045438	protein_coding	Cox19	ENSMUST00000198966	protein_coding		5	-1	139351418	475
ENSMUSG00000034163	protein_coding	Zfc3h1	ENSMUST00000127283	retained_intron		10	1	115427305	1546
ENSMUSG00000042271	protein_coding	Nxt2	ENSMUST00000112914	protein_coding	principal1	X	1	142228177	2484
ENSMUSG00000005102	protein_coding	Eif2ak4	ENSMUST00000110869	protein_coding		2	1	118438842	1715
ENSMUSG00000034163	protein_coding	Zfc3h1	ENSMUST00000143751	retained_intron		10	1	115428507	677
ENSMUSG00000045438	protein_coding	Cox19	ENSMUST00000133951	nonsense_mediated_decay		5	-1	139345125	344
ENSMUSG00000036086	protein_coding	Zranb3	ENSMUST00000086614	protein_coding	principal1	1	-1	128102462	4210
ENSMUSG00000034163	protein_coding	Zfc3h1	ENSMUST00000141246	retained_intron		10	1	115431079	424
ENSMUSG00000042271	protein_coding	Nxt2	ENSMUST00000138877	retained_intron		X	1	142228227	436
ENSMUSG00000045438	protein_coding	Cox19	ENSMUST00000152715	retained_intron		5	-1	139345160	748
ENSMUSG00000005102	protein_coding	Eif2ak4	ENSMUST00000125281	processed_transcript		2	1	118457160	517
ENSMUSG00000115300	TEC	Gm49188	ENSMUST00000226218	TEC		15	1	34481707	2123
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000210818	nonsense_mediated_decay		7	-1	45136417	976
ENSMUSG00000042271	protein_coding	Nxt2	ENSMUST00000112913	protein_coding		X	1	142228703	2538
ENSMUSG00000036086	protein_coding	Zranb3	ENSMUST00000112538	protein_coding	principal1	1	-1	128103001	4741
ENSMUSG00000045438	protein_coding	Cox19	ENSMUST00000148000	retained_intron		5	-1	139345165	696
ENSMUSG00000034480	protein_coding	Diaph2	ENSMUST00000037854	protein_coding	principal2	X	1	129749805	3742
ENSMUSG00000060017	protein_coding	Olfr121	ENSMUST00000174675	protein_coding	principal1	17	1	37748855	1494
ENSMUSG00000036086	protein_coding	Zranb3	ENSMUST00000143389	processed_transcript		1	-1	127972958	686
ENSMUSG00000005102	protein_coding	Eif2ak4	ENSMUST00000102527	protein_coding		2	1	118389112	4906
ENSMUSG00000050854	protein_coding	Tmem125	ENSMUST00000060214	protein_coding	principal1	4	-1	118543728	1864
ENSMUSG00000034480	protein_coding	Diaph2	ENSMUST00000155333	retained_intron		X	1	129749824	994
ENSMUSG00000060017	protein_coding	Olfr121	ENSMUST00000074555	protein_coding	principal1	17	1	37748855	1253
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000211542	retained_intron		7	-1	45136076	2482
ENSMUSG00000034480	protein_coding	Diaph2	ENSMUST00000113320	protein_coding	alternative2	X	1	129749976	8196
ENSMUSG00000050854	protein_coding	Tmem125	ENSMUST00000128098	protein_coding		4	-1	118544044	929
ENSMUSG00000034480	protein_coding	Diaph2	ENSMUST00000133457	processed_transcript		X	1	129972533	960
ENSMUSG00000050854	protein_coding	Tmem125	ENSMUST00000150044	protein_coding		4	-1	118542962	717
ENSMUSG00000097724	antisense	Gm26850	ENSMUST00000181653	antisense		3	1	63963633	2669
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000146760	protein_coding	principal2	7	-1	45136432	1075
ENSMUSG00000097724	antisense	Gm26850	ENSMUST00000192898	antisense		3	1	63963635	1816
ENSMUSG00000091879	protein_coding	Vmn2r17	ENSMUST00000232833	protein_coding	alternative2	5	1	109419688	7795
ENSMUSG00000091879	protein_coding	Vmn2r17	ENSMUST00000232722	protein_coding		5	1	109419688	6825
ENSMUSG00000024539	protein_coding	Ptpn2	ENSMUST00000025420	protein_coding	principal3	18	-1	67724588	1568
ENSMUSG00000050854	protein_coding	Tmem125	ENSMUST00000156191	protein_coding		4	-1	118543289	626
ENSMUSG00000091879	protein_coding	Vmn2r17	ENSMUST00000233536	protein_coding	alternative2	5	1	109419688	7792
ENSMUSG00000058820	protein_coding	Olfr146	ENSMUST00000214410	protein_coding	principal1	9	-1	39023362	1651
ENSMUSG00000091879	protein_coding	Vmn2r17	ENSMUST00000232748	retained_intron		5	1	109419689	6192
ENSMUSG00000050854	protein_coding	Tmem125	ENSMUST00000154025	processed_transcript		4	-1	118543249	203
ENSMUSG00000034480	protein_coding	Diaph2	ENSMUST00000167619	protein_coding	alternative2	X	1	129749742	8439
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000209238	nonsense_mediated_decay		7	-1	45136081	1041
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000098668	protein_coding		7	-1	25477534	1478
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000210083	retained_intron		7	-1	45132607	619
ENSMUSG00000058820	protein_coding	Olfr146	ENSMUST00000073671	protein_coding	principal1	9	-1	39019619	1061
ENSMUSG00000038740	protein_coding	Mvb12b	ENSMUST00000041555	protein_coding	principal1	2	-1	33887946	4998
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000210197	protein_coding	alternative2	7	-1	45136122	834
ENSMUSG00000058820	protein_coding	Olfr146	ENSMUST00000215383	protein_coding		9	-1	39023360	580
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000209612	protein_coding		7	-1	45133909	107
ENSMUSG00000091879	protein_coding	Vmn2r17	ENSMUST00000171841	protein_coding	principal2	5	1	109419689	7946
ENSMUSG00000058820	protein_coding	Olfr146	ENSMUST00000214369	protein_coding		9	-1	39023377	488
ENSMUSG00000078887	protein_coding	Gm6710	ENSMUST00000109011	protein_coding		2	1	175869219	1445
ENSMUSG00000038740	protein_coding	Mvb12b	ENSMUST00000195203	retained_intron		2	-1	33788759	3449
ENSMUSG00000036086	protein_coding	Zranb3	ENSMUST00000097597	processed_transcript		1	-1	128103047	1913
ENSMUSG00000091879	protein_coding	Vmn2r17	ENSMUST00000233038	protein_coding		5	1	109419689	6976
ENSMUSG00000091879	protein_coding	Vmn2r17	ENSMUST00000233724	protein_coding	alternative2	5	1	109419689	7943
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000211246	protein_coding	alternative2	7	-1	45136056	852
ENSMUSG00000036086	protein_coding	Zranb3	ENSMUST00000127393	retained_intron		1	-1	128102463	3374
ENSMUSG00000036086	protein_coding	Zranb3	ENSMUST00000131732	processed_transcript		1	-1	128018693	611
ENSMUSG00000024539	protein_coding	Ptpn2	ENSMUST00000122412	protein_coding	alternative2	18	-1	67724595	2667
ENSMUSG00000078887	protein_coding	Gm6710	ENSMUST00000147820	processed_transcript		2	1	175869245	599
ENSMUSG00000110206	protein_coding	Flt3l	ENSMUST00000210612	retained_intron		7	-1	45134945	718
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000206717	retained_intron		7	-1	25477577	3444
ENSMUSG00000078887	protein_coding	Gm6710	ENSMUST00000149549	retained_intron		2	1	175869286	570
ENSMUSG00000036086	protein_coding	Zranb3	ENSMUST00000124876	retained_intron		1	-1	128102454	515
ENSMUSG00000048200	protein_coding	Cracr2b	ENSMUST00000053670	protein_coding	principal2	7	1	141461094	1698
ENSMUSG00000008845	protein_coding	Cd163	ENSMUST00000032234	protein_coding	principal3	6	1	124304656	4404
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000206687	protein_coding		7	-1	25477534	1061
ENSMUSG00000048200	protein_coding	Cracr2b	ENSMUST00000167491	protein_coding		7	1	141461895	741
ENSMUSG00000078887	protein_coding	Gm6710	ENSMUST00000109012	protein_coding	principal1	2	1	175873101	1665
ENSMUSG00000024539	protein_coding	Ptpn2	ENSMUST00000128169	processed_transcript		18	-1	67690224	760
ENSMUSG00000038740	protein_coding	Mvb12b	ENSMUST00000192765	processed_transcript		2	-1	33886845	1138
ENSMUSG00000048200	protein_coding	Cracr2b	ENSMUST00000165194	protein_coding		7	1	141461960	539
ENSMUSG00000089989	protein_coding	Gm45713	ENSMUST00000209467	protein_coding	principal1	7	-1	45136231	1477
ENSMUSG00000038740	protein_coding	Mvb12b	ENSMUST00000148660	protein_coding		2	-1	33886845	641
ENSMUSG00000085288	unprocessed_pseudogene	Gm16356	ENSMUST00000143300	unprocessed_pseudogene		2	1	175901725	169
ENSMUSG00000048200	protein_coding	Cracr2b	ENSMUST00000172215	protein_coding		7	1	141463111	771
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000206676	protein_coding	alternative2	7	-1	25477534	1533
ENSMUSG00000022175	protein_coding	Lrp10	ENSMUST00000022782	protein_coding	principal1	14	1	54464137	4228
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000206583	nonsense_mediated_decay		7	-1	25477534	1399
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000205308	protein_coding		7	-1	25477534	993
ENSMUSG00000048200	protein_coding	Cracr2b	ENSMUST00000170879	protein_coding	alternative2	7	1	141463411	1158
ENSMUSG00000089756	protein_coding	Zfp966	ENSMUST00000108949	protein_coding	principal1	2	-1	175931051	2939
ENSMUSG00000038740	protein_coding	Mvb12b	ENSMUST00000146892	processed_transcript		2	-1	33887482	520
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000206171	protein_coding	alternative2	7	-1	25477573	1722
ENSMUSG00000022175	protein_coding	Lrp10	ENSMUST00000227760	nonsense_mediated_decay		14	1	54465636	323
ENSMUSG00000008845	protein_coding	Cd163	ENSMUST00000112541	protein_coding	alternative2	6	1	124304700	4443
ENSMUSG00000103922	processed_pseudogene	Gm6123	ENSMUST00000193658	processed_pseudogene		1	1	4771131	1069
ENSMUSG00000033701	protein_coding	Acbd6	ENSMUST00000080138	protein_coding		1	1	155558120	993
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000206483	retained_intron		7	-1	25476704	1060
ENSMUSG00000048200	protein_coding	Cracr2b	ENSMUST00000163833	retained_intron		7	1	141464044	387
ENSMUSG00000091896	protein_coding	Ube2d2a	ENSMUST00000170693	protein_coding	principal1	18	1	35771558	2480
ENSMUSG00000089756	protein_coding	Zfp966	ENSMUST00000109018	protein_coding		2	-1	175931100	733
ENSMUSG00000091345	protein_coding	Col6a5	ENSMUST00000190193	protein_coding	principal1	9	-1	105960643	9289
ENSMUSG00000074272	protein_coding	Ceacam1	ENSMUST00000206981	retained_intron		7	-1	25477583	1711
ENSMUSG00000022175	protein_coding	Lrp10	ENSMUST00000228407	protein_coding		14	1	54467553	818
ENSMUSG00000112028	lincRNA	1700113B09Rik	ENSMUST00000218730	lincRNA		10	1	71181036	649
ENSMUSG00000112028	lincRNA	1700113B09Rik	ENSMUST00000219835	lincRNA		10	1	71181347	654
ENSMUSG00000048200	protein_coding	Cracr2b	ENSMUST00000167572	retained_intron		7	1	141465094	422
ENSMUSG00000062252	protein_coding	Lhfpl5	ENSMUST00000232862	protein_coding	principal1	17	1	28575641	1619
ENSMUSG00000008845	protein_coding	Cd163	ENSMUST00000203210	retained_intron		6	1	124320487	2779
ENSMUSG00000022175	protein_coding	Lrp10	ENSMUST00000226472	retained_intron		14	1	54468813	823
ENSMUSG00000112028	lincRNA	1700113B09Rik	ENSMUST00000218350	lincRNA		10	1	71201745	429
ENSMUSG00000048200	protein_coding	Cracr2b	ENSMUST00000171994	retained_intron		7	1	141465228	442
ENSMUSG00000067150	protein_coding	Xpo5	ENSMUST00000087031	protein_coding	principal1	17	1	46202782	5081
ENSMUSG00000048200	protein_coding	Cracr2b	ENSMUST00000116247	protein_coding		7	1	141465674	689
ENSMUSG00000091896	protein_coding	Ube2d2a	ENSMUST00000235351	retained_intron		18	1	35771587	3457
ENSMUSG00000101151	processed_pseudogene	Gm17929	ENSMUST00000186851	processed_pseudogene		1	-1	57564051	627
ENSMUSG00000091345	protein_coding	Col6a5	ENSMUST00000189127	retained_intron		9	-1	105881806	779
ENSMUSG00000087388	lincRNA	Gm12128	ENSMUST00000131013	lincRNA		11	1	37658989	2914
ENSMUSG00000027822	protein_coding	Slc33a1	ENSMUST00000161659	protein_coding	principal1	3	-1	63964666	2554
ENSMUSG00000091896	protein_coding	Ube2d2a	ENSMUST00000237984	protein_coding		18	1	35771588	553
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000183307	retained_intron		9	-1	107770981	6321
ENSMUSG00000078886	protein_coding	Gm2026	ENSMUST00000109007	protein_coding		2	1	175965331	1621
ENSMUSG00000091345	protein_coding	Col6a5	ENSMUST00000165165	protein_coding		9	-1	105960643	8046
ENSMUSG00000027999	protein_coding	Pla2g12a	ENSMUST00000029629	protein_coding	principal1	3	1	129878606	1561
ENSMUSG00000074882	protein_coding	Cyp2c68	ENSMUST00000099472	protein_coding	principal1	19	-1	39741054	1724
ENSMUSG00000051166	protein_coding	Eml5	ENSMUST00000065716	protein_coding		12	-1	98901172	9482
ENSMUSG00000067150	protein_coding	Xpo5	ENSMUST00000233340	retained_intron		17	1	46202817	2137
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000187516	protein_coding	alternative2	1	1	74375195	1893
ENSMUSG00000078886	protein_coding	Gm2026	ENSMUST00000174416	protein_coding		2	1	175965379	532
ENSMUSG00000112366	lincRNA	C730027H18Rik	ENSMUST00000218381	lincRNA		10	-1	71182040	2300
ENSMUSG00000021242	protein_coding	Npc2	ENSMUST00000021668	protein_coding	principal1	12	-1	84773152	3299
ENSMUSG00000091896	protein_coding	Ube2d2a	ENSMUST00000235516	retained_intron		18	1	35771762	884
ENSMUSG00000112366	lincRNA	C730027H18Rik	ENSMUST00000219843	lincRNA		10	-1	71182033	143
ENSMUSG00000039608	protein_coding	Olfr303	ENSMUST00000215733	protein_coding	principal1	7	-1	86397492	3914
ENSMUSG00000027999	protein_coding	Pla2g12a	ENSMUST00000196838	nonsense_mediated_decay		3	1	129878814	625
ENSMUSG00000027822	protein_coding	Slc33a1	ENSMUST00000029402	protein_coding	principal1	3	-1	63964768	3150
ENSMUSG00000039608	protein_coding	Olfr303	ENSMUST00000215532	protein_coding	principal1	7	-1	86397742	3572
ENSMUSG00000091896	protein_coding	Ube2d2a	ENSMUST00000236235	retained_intron		18	1	35787324	8159
ENSMUSG00000021242	protein_coding	Npc2	ENSMUST00000223200	retained_intron		12	-1	84762540	2542
ENSMUSG00000112366	lincRNA	C730027H18Rik	ENSMUST00000219822	lincRNA		10	-1	71182039	3268
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000194801	retained_intron		9	-1	107760563	2691
ENSMUSG00000039608	protein_coding	Olfr303	ENSMUST00000216409	protein_coding	principal1	7	-1	86397789	4106
ENSMUSG00000091896	protein_coding	Ube2d2a	ENSMUST00000236484	protein_coding		18	1	35799841	535
ENSMUSG00000021242	protein_coding	Npc2	ENSMUST00000221056	retained_intron		12	-1	84772914	728
ENSMUSG00000056895	protein_coding	H2bu2	ENSMUST00000078267	protein_coding	principal1	11	1	58948920	614
ENSMUSG00000027822	protein_coding	Slc33a1	ENSMUST00000160883	protein_coding	principal1	3	-1	63964372	1978
ENSMUSG00000078886	protein_coding	Gm2026	ENSMUST00000109008	protein_coding	principal1	2	1	175968942	1497
ENSMUSG00000067150	protein_coding	Xpo5	ENSMUST00000232971	retained_intron		17	1	46229869	3145
ENSMUSG00000039608	protein_coding	Olfr303	ENSMUST00000215234	nonsense_mediated_decay		7	-1	86397789	3646
ENSMUSG00000091896	protein_coding	Ube2d2a	ENSMUST00000236550	protein_coding		18	1	35799952	335
ENSMUSG00000062252	protein_coding	Lhfpl5	ENSMUST00000080780	protein_coding	principal1	17	1	28575653	1313
ENSMUSG00000034532	protein_coding	Fbxo16	ENSMUST00000224629	protein_coding	principal2	14	1	65266618	3781
ENSMUSG00000112189	lincRNA	C730027H18Rik	ENSMUST00000219181	lincRNA		10	-1	71182052	1306
ENSMUSG00000027999	protein_coding	Pla2g12a	ENSMUST00000061165	protein_coding		3	1	129881184	476
ENSMUSG00000039608	protein_coding	Olfr303	ENSMUST00000053958	protein_coding	principal1	7	-1	86395535	1040
ENSMUSG00000081588	transcribed_processed_pseudogene	Gm11661	ENSMUST00000121761	transcribed_processed_pseudogene		11	-1	104566726	1327
ENSMUSG00000091896	protein_coding	Ube2d2a	ENSMUST00000235170	retained_intron		18	1	35800896	632
ENSMUSG00000078891	lincRNA	Gm11008	ENSMUST00000109032	lincRNA		2	1	176097788	622
ENSMUSG00000080712	processed_pseudogene	H2bu1-ps	ENSMUST00000117558	processed_pseudogene		11	-1	58954512	465
ENSMUSG00000078891	lincRNA	Gm11008	ENSMUST00000178432	lincRNA		2	1	176097450	192
ENSMUSG00000062252	protein_coding	Lhfpl5	ENSMUST00000232974	protein_coding	principal1	17	1	28575760	1416
ENSMUSG00000091896	protein_coding	Ube2d2a	ENSMUST00000237482	processed_transcript		18	1	35801307	348
ENSMUSG00000110039	processed_pseudogene	Gm45541	ENSMUST00000210443	processed_pseudogene		7	-1	86402819	54
ENSMUSG00000027999	protein_coding	Pla2g12a	ENSMUST00000196736	retained_intron		3	1	129892830	2992
ENSMUSG00000085103	unprocessed_pseudogene	Gm16357	ENSMUST00000144091	unprocessed_pseudogene		2	-1	176117866	474
ENSMUSG00000110528	processed_pseudogene	Gm1943	ENSMUST00000211890	processed_pseudogene		8	-1	109340864	174
ENSMUSG00000091896	protein_coding	Ube2d2a	ENSMUST00000167406	protein_coding	principal1	18	1	35771602	2393
ENSMUSG00000104212	lincRNA	Gm37986	ENSMUST00000193285	lincRNA		1	1	183414466	383
ENSMUSG00000029541	protein_coding	Cyp2w1	ENSMUST00000200478	retained_intron		5	1	139352617	689
ENSMUSG00000034532	protein_coding	Fbxo16	ENSMUST00000223608	retained_intron		14	1	65266655	1335
ENSMUSG00000110491	lincRNA	Gm31138	ENSMUST00000212296	lincRNA		9	1	3199894	1705
ENSMUSG00000033701	protein_coding	Acbd6	ENSMUST00000035560	protein_coding	principal1	1	1	155558122	5592
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182371	nonsense_mediated_decay		9	-1	107770980	2986
ENSMUSG00000051166	protein_coding	Eml5	ENSMUST00000223282	protein_coding	principal1	12	-1	98901484	7595
ENSMUSG00000034532	protein_coding	Fbxo16	ENSMUST00000169656	protein_coding	alternative2	14	1	65266732	1019
ENSMUSG00000061144	protein_coding	Spink12	ENSMUST00000081271	protein_coding	alternative2	18	1	44104407	1007
ENSMUSG00000046668	protein_coding	Cxxc5	ENSMUST00000235161	protein_coding		18	1	35829397	651
ENSMUSG00000110646	unprocessed_pseudogene	Olfr369-ps1	ENSMUST00000212589	unprocessed_pseudogene		9	1	3233346	836
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000035199	protein_coding	alternative1	9	-1	107770987	3064
ENSMUSG00000034532	protein_coding	Fbxo16	ENSMUST00000226005	protein_coding	alternative2	14	1	65266737	3700
ENSMUSG00000061549	protein_coding	Olfr301	ENSMUST00000174362	protein_coding	principal1	7	1	86403846	1937
ENSMUSG00000029541	protein_coding	Cyp2w1	ENSMUST00000197955	protein_coding		5	1	139354576	602
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182026	protein_coding		9	-1	107744286	835
ENSMUSG00000061144	protein_coding	Spink12	ENSMUST00000239465	protein_coding	principal2	18	1	44104523	891
ENSMUSG00000033701	protein_coding	Acbd6	ENSMUST00000097529	protein_coding		1	1	155558126	1255
ENSMUSG00000095648	protein_coding	Gm2004	ENSMUST00000179349	protein_coding		2	-1	176149825	195
ENSMUSG00000085379	processed_transcript	2310058D17Rik	ENSMUST00000131221	processed_transcript		11	-1	58978050	3201
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182215	retained_intron		9	-1	107744234	631
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182332	retained_intron		9	-1	107750022	793
ENSMUSG00000095648	protein_coding	Gm2004	ENSMUST00000109049	protein_coding	principal1	2	-1	176149825	1749
ENSMUSG00000095648	protein_coding	Gm2004	ENSMUST00000178872	protein_coding		2	-1	176144697	192
ENSMUSG00000046668	protein_coding	Cxxc5	ENSMUST00000060722	protein_coding	principal1	18	1	35829788	2302
ENSMUSG00000097416	antisense	Gm26670	ENSMUST00000226862	antisense		1	-1	191990138	340
ENSMUSG00000086367	unprocessed_pseudogene	Gm6182	ENSMUST00000156439	unprocessed_pseudogene		2	1	176201042	1208
ENSMUSG00000029541	protein_coding	Cyp2w1	ENSMUST00000031521	protein_coding	principal1	5	1	139352617	1512
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182792	retained_intron		9	-1	107749911	4718
ENSMUSG00000097416	antisense	Gm26670	ENSMUST00000180429	antisense		1	-1	191990122	3287
ENSMUSG00000032572	protein_coding	Col6a4	ENSMUST00000149207	processed_transcript		9	-1	105998322	1721
ENSMUSG00000033701	protein_coding	Acbd6	ENSMUST00000194476	processed_transcript		1	1	155563117	691
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182421	nonsense_mediated_decay		9	-1	107770951	1704
ENSMUSG00000033701	protein_coding	Acbd6	ENSMUST00000159339	retained_intron		1	1	155567248	496
ENSMUSG00000034993	protein_coding	Vat1	ENSMUST00000040430	protein_coding	principal1	11	-1	101466230	2766
ENSMUSG00000046668	protein_coding	Cxxc5	ENSMUST00000237291	protein_coding		18	1	35829893	1169
ENSMUSG00000051166	protein_coding	Eml5	ENSMUST00000222717	retained_intron		12	-1	98794633	2136
ENSMUSG00000033701	protein_coding	Acbd6	ENSMUST00000192730	nonsense_mediated_decay		1	1	155686991	424
ENSMUSG00000078894	protein_coding	2210418O10Rik	ENSMUST00000099009	protein_coding	principal1	2	1	176226569	3823
ENSMUSG00000085681	lincRNA	Gm13982	ENSMUST00000138372	lincRNA		2	-1	117417697	755
ENSMUSG00000051166	protein_coding	Eml5	ENSMUST00000220848	retained_intron		12	-1	98792701	607
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000194400	protein_coding		9	-1	107751910	322
ENSMUSG00000032572	protein_coding	Col6a4	ENSMUST00000218471	nonsense_mediated_decay		9	-1	106013446	1086
ENSMUSG00000022952	protein_coding	Runx1	ENSMUST00000023673	protein_coding	principal4	16	-1	92826149	5861
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182836	retained_intron		9	-1	107751962	500
ENSMUSG00000046668	protein_coding	Cxxc5	ENSMUST00000235169	protein_coding		18	1	35830314	857
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182856	retained_intron		9	-1	107754090	539
ENSMUSG00000078894	protein_coding	2210418O10Rik	ENSMUST00000136719	protein_coding		2	1	176226573	2314
ENSMUSG00000051166	protein_coding	Eml5	ENSMUST00000221107	retained_intron		12	-1	98798980	793
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182422	retained_intron		9	-1	107754602	600
ENSMUSG00000046668	protein_coding	Cxxc5	ENSMUST00000235337	protein_coding		18	1	35854687	885
ENSMUSG00000083626	processed_pseudogene	Gm4459	ENSMUST00000118750	processed_pseudogene		7	-1	139660155	468
ENSMUSG00000078894	protein_coding	2210418O10Rik	ENSMUST00000135430	protein_coding		2	1	176230177	195
ENSMUSG00000046668	protein_coding	Cxxc5	ENSMUST00000235404	protein_coding		18	1	35854738	502
ENSMUSG00000078894	protein_coding	2210418O10Rik	ENSMUST00000166464	protein_coding		2	1	176236860	750
ENSMUSG00000051166	protein_coding	Eml5	ENSMUST00000222097	nonsense_mediated_decay		12	-1	98802336	914
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000193342	nonsense_mediated_decay		9	-1	107767597	896
ENSMUSG00000033739	protein_coding	Fkbpl	ENSMUST00000036720	protein_coding	principal1	17	1	34644764	1270
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000147233	retained_intron		1	1	74375203	2584
ENSMUSG00000036964	protein_coding	Trim17	ENSMUST00000047697	protein_coding		11	1	58954685	3664
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000192130	nonsense_mediated_decay		9	-1	107770972	784
ENSMUSG00000117841	processed_transcript	Gm50371	ENSMUST00000235919	processed_transcript		18	1	35799842	358
ENSMUSG00000022952	protein_coding	Runx1	ENSMUST00000113956	protein_coding		16	-1	92697328	4738
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000194682	retained_intron		9	-1	107757260	502
ENSMUSG00000033739	protein_coding	Fkbpl	ENSMUST00000174796	protein_coding		17	1	34644841	257
ENSMUSG00000051166	protein_coding	Eml5	ENSMUST00000222593	retained_intron		12	-1	98799986	1690
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182304	protein_coding		9	-1	107770495	850
ENSMUSG00000051166	protein_coding	Eml5	ENSMUST00000221511	processed_transcript		12	-1	98800033	442
ENSMUSG00000079584	protein_coding	Gm364	ENSMUST00000114725	protein_coding	principal1	X	1	57409154	2156
ENSMUSG00000051166	protein_coding	Eml5	ENSMUST00000220676	retained_intron		12	-1	98802424	812
ENSMUSG00000001313	protein_coding	Rnd2	ENSMUST00000153185	processed_transcript		11	1	101464999	1578
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182007	retained_intron		9	-1	107770959	1939
ENSMUSG00000049353	protein_coding	Rd3	ENSMUST00000180463	protein_coding	principal1	1	1	191977370	3724
ENSMUSG00000049571	protein_coding	Cfap46	ENSMUST00000196540	protein_coding		7	-1	139606658	849
ENSMUSG00000051166	protein_coding	Eml5	ENSMUST00000222128	protein_coding		12	-1	98827365	551
ENSMUSG00000001313	protein_coding	Rnd2	ENSMUST00000134980	processed_transcript		11	1	101465484	831
ENSMUSG00000036964	protein_coding	Trim17	ENSMUST00000075141	protein_coding	principal1	11	1	58963802	3028
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182022	protein_coding		9	-1	107770959	869
ENSMUSG00000113196	TEC	D230049E03Rik	ENSMUST00000220865	TEC		12	1	98766105	4251
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000183248	protein_coding		9	-1	107770945	781
ENSMUSG00000022952	protein_coding	Runx1	ENSMUST00000168195	protein_coding	alternative2	16	-1	92696125	1985
ENSMUSG00000113102	TEC	A930040O22Rik	ENSMUST00000221662	TEC		12	1	98831813	973
ENSMUSG00000026571	protein_coding	Dcaf6	ENSMUST00000027856	protein_coding	principal1	1	-1	165460465	4110
ENSMUSG00000049353	protein_coding	Rd3	ENSMUST00000181512	protein_coding		1	1	191977373	1760
ENSMUSG00000034785	protein_coding	Dio1	ENSMUST00000082426	protein_coding	principal1	4	-1	107307169	1690
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182073	retained_intron		9	-1	107770989	897
ENSMUSG00000082142	processed_pseudogene	Gm13518	ENSMUST00000120018	processed_pseudogene		2	1	56039853	233
ENSMUSG00000022952	protein_coding	Runx1	ENSMUST00000187242	protein_coding		16	-1	92695495	716
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000182518	retained_intron		9	-1	107770986	1272
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000027368	protein_coding	principal2	1	1	74375203	2315
ENSMUSG00000034785	protein_coding	Dio1	ENSMUST00000150974	nonsense_mediated_decay		4	-1	107307142	761
ENSMUSG00000032580	protein_coding	Rbm5	ENSMUST00000181993	retained_intron		9	-1	107770959	1775
ENSMUSG00000078851	protein_coding	H2aw	ENSMUST00000108817	protein_coding	principal1	11	1	58954685	2146
ENSMUSG00000049353	protein_coding	Rd3	ENSMUST00000175680	protein_coding		1	1	191978251	1969
ENSMUSG00000022952	protein_coding	Runx1	ENSMUST00000189126	retained_intron		16	-1	92697325	3815
ENSMUSG00000034785	protein_coding	Dio1	ENSMUST00000134366	nonsense_mediated_decay		4	-1	107307124	671
ENSMUSG00000026571	protein_coding	Dcaf6	ENSMUST00000193353	retained_intron		1	-1	165351998	3034
ENSMUSG00000044092	protein_coding	C130050O18Rik	ENSMUST00000163940	protein_coding	principal1	5	1	139405280	1618
ENSMUSG00000049353	protein_coding	Rd3	ENSMUST00000192547	retained_intron		1	1	191984170	2223
ENSMUSG00000022952	protein_coding	Runx1	ENSMUST00000186296	protein_coding		16	-1	92825778	336
ENSMUSG00000034785	protein_coding	Dio1	ENSMUST00000129138	protein_coding		4	-1	107307124	632
ENSMUSG00000034785	protein_coding	Dio1	ENSMUST00000126291	protein_coding		4	-1	107307118	616
ENSMUSG00000080152	unprocessed_pseudogene	H3f4	ENSMUST00000122447	unprocessed_pseudogene		11	1	58961812	411
ENSMUSG00000034785	protein_coding	Dio1	ENSMUST00000147709	nonsense_mediated_decay		4	-1	107307118	431
ENSMUSG00000034785	protein_coding	Dio1	ENSMUST00000106748	protein_coding		4	-1	107307118	396
ENSMUSG00000022952	protein_coding	Runx1	ENSMUST00000189679	processed_transcript		16	-1	92826074	2538
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000131511	retained_intron		1	1	74375225	2726
ENSMUSG00000034785	protein_coding	Dio1	ENSMUST00000145332	processed_transcript		4	-1	107307066	565
ENSMUSG00000110266	protein_coding	Gm32742	ENSMUST00000210433	protein_coding	principal1	9	-1	51165517	8516
ENSMUSG00000026571	protein_coding	Dcaf6	ENSMUST00000194869	protein_coding		1	-1	165388746	849
ENSMUSG00000018537	protein_coding	Pcgf2	ENSMUST00000018681	protein_coding	principal1	11	-1	97700497	1755
ENSMUSG00000026571	protein_coding	Dcaf6	ENSMUST00000195220	protein_coding		1	-1	165388761	451
ENSMUSG00000004665	protein_coding	Cnn2	ENSMUST00000004784	protein_coding	principal1	10	1	79988584	2460
ENSMUSG00000044092	protein_coding	C130050O18Rik	ENSMUST00000052176	protein_coding	principal1	5	1	139406387	1532
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000136786	processed_transcript		1	1	74375253	1055
ENSMUSG00000018537	protein_coding	Pcgf2	ENSMUST00000103148	protein_coding	principal1	11	-1	97699641	1438
ENSMUSG00000004665	protein_coding	Cnn2	ENSMUST00000105374	protein_coding		10	1	79988623	926
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000135137	processed_transcript		1	1	74375572	378
ENSMUSG00000057240	protein_coding	Ms4a13	ENSMUST00000073380	protein_coding	principal3	19	-1	11196723	1375
ENSMUSG00000018537	protein_coding	Pcgf2	ENSMUST00000126185	processed_transcript		11	-1	97699581	470
ENSMUSG00000044092	protein_coding	C130050O18Rik	ENSMUST00000164078	nonsense_mediated_decay		5	1	139406465	2974
ENSMUSG00000067597	protein_coding	Dgat2l6	ENSMUST00000140551	retained_intron		X	1	100524838	4488
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000155865	processed_transcript		1	1	74376657	331
ENSMUSG00000105303	processed_pseudogene	Gm18555	ENSMUST00000197935	processed_pseudogene		5	1	109473396	584
ENSMUSG00000093688	processed_pseudogene	Gm8488	ENSMUST00000176112	processed_pseudogene		5	-1	109529470	1280
ENSMUSG00000020828	protein_coding	Pld2	ENSMUST00000018429	protein_coding	principal3	11	1	70540306	3659
ENSMUSG00000018537	protein_coding	Pcgf2	ENSMUST00000134003	processed_transcript		11	-1	97692409	811
ENSMUSG00000106028	unprocessed_pseudogene	Gm8493	ENSMUST00000196881	unprocessed_pseudogene		5	-1	109554156	489
ENSMUSG00000026418	protein_coding	Tnni1	ENSMUST00000187830	processed_transcript		1	1	135779434	2153
ENSMUSG00000057240	protein_coding	Ms4a13	ENSMUST00000188464	protein_coding	alternative2	19	-1	11196737	1301
ENSMUSG00000018537	protein_coding	Pcgf2	ENSMUST00000103149	protein_coding		11	-1	97692407	817
ENSMUSG00000082587	processed_pseudogene	Gm12129	ENSMUST00000120104	processed_pseudogene		11	1	38219069	1147
ENSMUSG00000026571	protein_coding	Dcaf6	ENSMUST00000195686	processed_transcript		1	-1	165460475	2213
ENSMUSG00000020828	protein_coding	Pld2	ENSMUST00000108557	protein_coding	alternative2	11	1	70540343	3655
ENSMUSG00000116898	bidirectional_promoter_lncRNA	Gm49785	ENSMUST00000231565	bidirectional_promoter_lncRNA		16	1	17531182	337
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000133896	retained_intron		1	1	74381651	604
ENSMUSG00000104427	TEC	Gm38368	ENSMUST00000193181	TEC		1	1	165379519	1335
ENSMUSG00000020828	protein_coding	Pld2	ENSMUST00000108556	protein_coding		11	1	70540356	3391
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000127487	retained_intron		1	1	74383034	704
ENSMUSG00000102401	sense_intronic	Gm37864	ENSMUST00000195308	sense_intronic		1	-1	165454629	3075
ENSMUSG00000087296	lincRNA	Gm12130	ENSMUST00000133599	lincRNA		11	-1	38520013	639
ENSMUSG00000018537	protein_coding	Pcgf2	ENSMUST00000179765	protein_coding	principal1	11	-1	97699384	2485
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000149166	processed_transcript		1	1	74383341	457
ENSMUSG00000083750	processed_pseudogene	Gm14108	ENSMUST00000122234	processed_pseudogene		2	-1	148071839	494
ENSMUSG00000110628	protein_coding	Gm37797	ENSMUST00000212114	protein_coding	principal1	18	1	44116263	815
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000163799	protein_coding		7	1	101317086	1723
ENSMUSG00000018537	protein_coding	Pcgf2	ENSMUST00000169807	protein_coding	principal1	11	-1	97699648	2347
ENSMUSG00000026177	protein_coding	Slc11a1	ENSMUST00000134189	processed_transcript		1	1	74383600	426
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000222126	retained_intron		12	1	111417017	2827
ENSMUSG00000083491	processed_pseudogene	Gm12423	ENSMUST00000118334	processed_pseudogene		4	1	47171669	135
ENSMUSG00000053647	protein_coding	Gper1	ENSMUST00000066211	protein_coding	principal1	5	1	139423151	2537
ENSMUSG00000048856	protein_coding	Slc25a47	ENSMUST00000221453	processed_transcript		12	1	108836046	604
ENSMUSG00000020828	protein_coding	Pld2	ENSMUST00000179806	retained_intron		11	1	70553960	875
ENSMUSG00000062757	protein_coding	Olfr1206	ENSMUST00000216950	protein_coding	principal1	2	1	88863231	3303
ENSMUSG00000083806	processed_pseudogene	Gm12131	ENSMUST00000117479	processed_pseudogene		11	-1	39727712	359
ENSMUSG00000020828	protein_coding	Pld2	ENSMUST00000130678	protein_coding		11	1	70555638	467
ENSMUSG00000062757	protein_coding	Olfr1206	ENSMUST00000077302	protein_coding	principal1	2	1	88864607	924
ENSMUSG00000067597	protein_coding	Dgat2l6	ENSMUST00000037541	protein_coding	principal1	X	1	100524841	1640
ENSMUSG00000053647	protein_coding	Gper1	ENSMUST00000173364	processed_transcript		5	1	139423280	492
ENSMUSG00000083947	protein_coding	Olfr122	ENSMUST00000172582	protein_coding	principal1	17	1	37768607	1620
ENSMUSG00000001313	protein_coding	Rnd2	ENSMUST00000001347	protein_coding	principal1	11	1	101468175	1394
ENSMUSG00000112586	lincRNA	Gm6729	ENSMUST00000219485	lincRNA		10	-1	86536337	2209
ENSMUSG00000020828	protein_coding	Pld2	ENSMUST00000146248	retained_intron		11	1	70555803	513
ENSMUSG00000083947	protein_coding	Olfr122	ENSMUST00000215449	processed_transcript		17	1	37768607	1707
ENSMUSG00000044197	protein_coding	Gpr146	ENSMUST00000188655	processed_transcript		5	1	139377697	2357
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000220537	protein_coding		12	1	111417430	598
ENSMUSG00000083947	protein_coding	Olfr122	ENSMUST00000217119	protein_coding	principal1	17	1	37771299	2224
ENSMUSG00000044197	protein_coding	Gpr146	ENSMUST00000137254	processed_transcript		5	1	139377742	1951
ENSMUSG00000083947	protein_coding	Olfr122	ENSMUST00000119082	protein_coding		17	1	37771628	993
ENSMUSG00000048856	protein_coding	Slc25a47	ENSMUST00000223296	processed_transcript		12	1	108836082	678
ENSMUSG00000051354	protein_coding	Samd3	ENSMUST00000218301	protein_coding	alternative2	10	1	26229707	2620
ENSMUSG00000112639	lincRNA	A730063M14Rik	ENSMUST00000217956	lincRNA		10	1	127070375	1770
ENSMUSG00000044197	protein_coding	Gpr146	ENSMUST00000138631	protein_coding		5	1	139378163	685
ENSMUSG00000075114	protein_coding	Olfr1208	ENSMUST00000214297	protein_coding	principal1	2	-1	88902262	2844
ENSMUSG00000095194	polymorphic_pseudogene	Olfr936	ENSMUST00000216912	polymorphic_pseudogene		9	-1	39047550	937
ENSMUSG00000075114	protein_coding	Olfr1208	ENSMUST00000214121	protein_coding	principal1	2	-1	88902311	2823
ENSMUSG00000095194	polymorphic_pseudogene	Olfr936	ENSMUST00000178303	protein_coding	principal1	9	-1	39047549	936
ENSMUSG00000048856	protein_coding	Slc25a47	ENSMUST00000221787	processed_transcript		12	1	108837064	838
ENSMUSG00000112639	lincRNA	A730063M14Rik	ENSMUST00000217874	lincRNA		10	1	127070481	329
ENSMUSG00000075114	protein_coding	Olfr1208	ENSMUST00000099810	protein_coding	principal1	2	-1	88897648	1075
ENSMUSG00000115339	lincRNA	Gm48913	ENSMUST00000226611	lincRNA		15	1	50897639	1505
ENSMUSG00000090816	processed_pseudogene	Gm6729	ENSMUST00000165173	processed_pseudogene		10	-1	86541334	1452
ENSMUSG00000102456	TEC	Gm37508	ENSMUST00000193417	TEC		16	1	40127468	43
ENSMUSG00000112893	processed_pseudogene	Gm9583	ENSMUST00000219613	processed_pseudogene		10	-1	86552650	1843
ENSMUSG00000037014	protein_coding	Sstr4	ENSMUST00000109962	protein_coding	principal1	2	1	148395344	1424
ENSMUSG00000051354	protein_coding	Samd3	ENSMUST00000220219	protein_coding	principal4	10	1	26230126	1744
ENSMUSG00000044197	protein_coding	Gpr146	ENSMUST00000051293	protein_coding	principal1	5	1	139380581	4157
ENSMUSG00000061080	protein_coding	Lsamp	ENSMUST00000189229	processed_transcript		16	1	39984361	637
ENSMUSG00000115654	lincRNA	Gm19303	ENSMUST00000226948	lincRNA		15	-1	51395610	1874
ENSMUSG00000024201	protein_coding	Kdm4b	ENSMUST00000025036	protein_coding	principal2	17	1	56326074	4577
ENSMUSG00000051354	protein_coding	Samd3	ENSMUST00000219318	retained_intron		10	1	26230596	2036
ENSMUSG00000116722	processed_pseudogene	Gm49627	ENSMUST00000231945	processed_pseudogene		16	-1	63955130	1045
ENSMUSG00000051354	protein_coding	Samd3	ENSMUST00000219738	protein_coding		10	1	26263952	324
ENSMUSG00000033502	protein_coding	Cdc14a	ENSMUST00000106491	protein_coding		3	-1	116423986	4292
ENSMUSG00000094182	protein_coding	Olfr937	ENSMUST00000215049	protein_coding	principal1	9	-1	39064951	2259
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000032927	protein_coding	principal1	7	1	101321113	1400
ENSMUSG00000024201	protein_coding	Kdm4b	ENSMUST00000086835	protein_coding	alternative2	17	1	56326091	4360
ENSMUSG00000094182	protein_coding	Olfr937	ENSMUST00000055567	protein_coding	principal1	9	-1	39060664	936
ENSMUSG00000015665	protein_coding	Awat1	ENSMUST00000096361	protein_coding	principal1	X	1	100572251	1390
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000210192	protein_coding	principal1	7	1	101321453	1258
ENSMUSG00000068167	protein_coding	Csnka2ip	ENSMUST00000209382	protein_coding	alternative2	16	-1	64602408	2855
ENSMUSG00000024201	protein_coding	Kdm4b	ENSMUST00000141507	protein_coding		17	1	56393920	2775
ENSMUSG00000109185	unprocessed_pseudogene	Gm18268	ENSMUST00000208445	unprocessed_pseudogene		17	-1	37779942	943
ENSMUSG00000068167	protein_coding	Csnka2ip	ENSMUST00000089279	protein_coding	principal2	16	-1	64479148	1336
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000172630	protein_coding		7	1	101321489	789
ENSMUSG00000044197	protein_coding	Gpr146	ENSMUST00000100514	protein_coding	principal1	5	1	139389785	4264
ENSMUSG00000115513	processed_pseudogene	Gm2361	ENSMUST00000228281	processed_pseudogene		15	-1	51548970	620
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000174291	protein_coding		7	1	101321714	903
ENSMUSG00000115563	lincRNA	Gm34562	ENSMUST00000227000	lincRNA		15	-1	51629635	251
ENSMUSG00000044197	protein_coding	Gpr146	ENSMUST00000053120	protein_coding		5	1	139378220	1040
ENSMUSG00000111684	processed_pseudogene	Gm8543	ENSMUST00000215888	processed_pseudogene		9	1	39074102	1130
ENSMUSG00000024201	protein_coding	Kdm4b	ENSMUST00000139679	protein_coding		17	1	56326062	927
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000167888	protein_coding		7	1	101321772	1049
ENSMUSG00000111862	sense_intronic	Gm47828	ENSMUST00000213173	sense_intronic		9	1	51215733	1248
ENSMUSG00000024201	protein_coding	Kdm4b	ENSMUST00000132363	processed_transcript		17	1	56372295	408
ENSMUSG00000051354	protein_coding	Samd3	ENSMUST00000164660	protein_coding	alternative2	10	1	26229707	2620
ENSMUSG00000048856	protein_coding	Slc25a47	ENSMUST00000057026	protein_coding	principal1	12	1	108851129	1580
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000121111	protein_coding	alternative2	4	1	119232915	3188
ENSMUSG00000024201	protein_coding	Kdm4b	ENSMUST00000147489	processed_transcript		17	1	56393517	130
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000172662	protein_coding		7	1	101321786	430
ENSMUSG00000051354	protein_coding	Samd3	ENSMUST00000060716	protein_coding	principal4	10	1	26229707	1874
ENSMUSG00000059920	protein_coding	4930453N24Rik	ENSMUST00000162732	processed_transcript		16	-1	64766656	1006
ENSMUSG00000105243	TEC	Gm43444	ENSMUST00000198123	TEC		3	-1	121020776	291
ENSMUSG00000048856	protein_coding	Slc25a47	ENSMUST00000221080	protein_coding		12	1	108851139	1890
ENSMUSG00000104749	TEC	Gm42926	ENSMUST00000200496	TEC		3	-1	121029782	697
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000030393	protein_coding	alternative2	4	1	119232939	3188
ENSMUSG00000083409	processed_pseudogene	Gm11340	ENSMUST00000119226	processed_pseudogene		13	-1	24291805	412
ENSMUSG00000109921	lincRNA	Gm33326	ENSMUST00000209741	lincRNA		8	-1	12466964	3815
ENSMUSG00000074743	protein_coding	Thbd	ENSMUST00000099270	protein_coding	principal1	2	-1	148408188	3723
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000173270	protein_coding		7	1	101321827	670
ENSMUSG00000062908	protein_coding	Acadm	ENSMUST00000072697	protein_coding	principal1	3	-1	153944632	2047
ENSMUSG00000081909	processed_pseudogene	Gm11341	ENSMUST00000122316	processed_pseudogene		13	1	24320302	447
ENSMUSG00000033502	protein_coding	Cdc14a	ENSMUST00000090464	protein_coding	principal1	3	-1	116424032	4485
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000174083	retained_intron		7	1	101321971	731
ENSMUSG00000109582	lincRNA	4933439N14Rik	ENSMUST00000211062	lincRNA		8	1	12502899	1087
ENSMUSG00000062908	protein_coding	Acadm	ENSMUST00000196688	retained_intron		3	-1	153930142	859
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000174140	nonsense_mediated_decay		7	1	101342502	649
ENSMUSG00000032053	protein_coding	Pou2af1	ENSMUST00000034554	protein_coding	principal1	9	1	51213708	2548
ENSMUSG00000059920	protein_coding	4930453N24Rik	ENSMUST00000076991	protein_coding	principal1	16	-1	64771161	5522
ENSMUSG00000097057	antisense	Gm17638	ENSMUST00000181255	antisense		15	1	77961674	4343
ENSMUSG00000026418	protein_coding	Tnni1	ENSMUST00000132795	protein_coding		1	1	135783065	509
ENSMUSG00000033502	protein_coding	Cdc14a	ENSMUST00000239145	protein_coding		3	-1	116428745	1984
ENSMUSG00000053553	protein_coding	3110082I17Rik	ENSMUST00000066052	protein_coding	principal1	5	-1	139460502	1429
ENSMUSG00000045202	protein_coding	Olfr123	ENSMUST00000216051	protein_coding	principal1	17	1	37793529	2716
ENSMUSG00000030688	protein_coding	Stard10	ENSMUST00000164479	protein_coding	principal1	7	1	101317119	1375
ENSMUSG00000079018	protein_coding	Ly6c1	ENSMUST00000188845	protein_coding	alternative2	15	-1	75048803	784
ENSMUSG00000045202	protein_coding	Olfr123	ENSMUST00000214770	protein_coding	principal1	17	1	37793744	2883
ENSMUSG00000112107	processed_pseudogene	Gm47560	ENSMUST00000218794	processed_pseudogene		10	-1	82769905	162
ENSMUSG00000062908	protein_coding	Acadm	ENSMUST00000200250	retained_intron		3	-1	153937809	690
ENSMUSG00000053553	protein_coding	3110082I17Rik	ENSMUST00000198474	protein_coding		5	-1	139460527	2030
ENSMUSG00000045202	protein_coding	Olfr123	ENSMUST00000054748	protein_coding	principal1	17	1	37795446	930
ENSMUSG00000112286	lincRNA	Gm47561	ENSMUST00000219360	lincRNA		10	1	82771321	678
ENSMUSG00000062908	protein_coding	Acadm	ENSMUST00000199342	retained_intron		3	-1	153936790	839
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000226988	protein_coding	alternative2	15	-1	73423128	4675
ENSMUSG00000049571	protein_coding	Cfap46	ENSMUST00000129990	protein_coding	principal1	7	-1	139683817	8180
ENSMUSG00000032053	protein_coding	Pou2af1	ENSMUST00000214322	protein_coding		9	1	51233143	1349
ENSMUSG00000056569	protein_coding	Mpz	ENSMUST00000070758	protein_coding	principal2	1	1	171150711	2002
ENSMUSG00000082911	processed_pseudogene	Gm14119	ENSMUST00000119511	processed_pseudogene		2	-1	148419266	235
ENSMUSG00000053553	protein_coding	3110082I17Rik	ENSMUST00000196267	retained_intron		5	-1	139460511	686
ENSMUSG00000102915	processed_pseudogene	Gm32460	ENSMUST00000195647	processed_pseudogene		1	1	191992861	232
ENSMUSG00000053553	protein_coding	3110082I17Rik	ENSMUST00000197512	processed_transcript		5	-1	139455530	647
ENSMUSG00000033502	protein_coding	Cdc14a	ENSMUST00000197830	nonsense_mediated_decay		3	-1	116422649	716
ENSMUSG00000056569	protein_coding	Mpz	ENSMUST00000238908	protein_coding	alternative2	1	1	171150711	2002
ENSMUSG00000062908	protein_coding	Acadm	ENSMUST00000196188	retained_intron		3	-1	153938674	323
ENSMUSG00000081886	processed_pseudogene	Gm6175	ENSMUST00000121351	processed_pseudogene		X	1	100585009	400
ENSMUSG00000058806	protein_coding	Col13a1	ENSMUST00000239309	protein_coding		10	-1	61849211	713
ENSMUSG00000101394	lincRNA	Gm28183	ENSMUST00000191321	lincRNA		2	-1	117803664	1406
ENSMUSG00000048501	protein_coding	Olfr938	ENSMUST00000056499	protein_coding	principal1	9	-1	39078887	1190
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000239146	protein_coding	alternative1	15	-1	73423191	4540
ENSMUSG00000079018	protein_coding	Ly6c1	ENSMUST00000065408	protein_coding	principal3	15	-1	75048830	844
ENSMUSG00000056821	lincRNA	1700028I16Rik	ENSMUST00000178540	lincRNA		10	1	82812123	1056
ENSMUSG00000062908	protein_coding	Acadm	ENSMUST00000156310	nonsense_mediated_decay		3	-1	153944467	728
ENSMUSG00000033502	protein_coding	Cdc14a	ENSMUST00000127704	retained_intron		3	-1	116424032	3825
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000110036	protein_coding	principal2	15	-1	73423191	4417
ENSMUSG00000114209	lincRNA	Gm48433	ENSMUST00000223901	lincRNA		14	1	65326331	701
ENSMUSG00000056569	protein_coding	Mpz	ENSMUST00000111334	protein_coding	principal2	1	1	171155515	1278
ENSMUSG00000032572	protein_coding	Col6a4	ENSMUST00000121963	protein_coding	principal1	9	-1	106096783	7371
ENSMUSG00000056821	lincRNA	1700028I16Rik	ENSMUST00000076984	lincRNA		10	1	82812123	1048
ENSMUSG00000086203	lincRNA	Gm13985	ENSMUST00000154409	lincRNA		2	-1	117812813	621
ENSMUSG00000021622	protein_coding	Ckmt2	ENSMUST00000022122	protein_coding	principal1	13	-1	91876885	1486
ENSMUSG00000033502	protein_coding	Cdc14a	ENSMUST00000148857	retained_intron		3	-1	116423024	4577
ENSMUSG00000056569	protein_coding	Mpz	ENSMUST00000149352	processed_transcript		1	1	171159594	322
ENSMUSG00000062908	protein_coding	Acadm	ENSMUST00000150070	protein_coding		3	-1	153944446	565
ENSMUSG00000086969	processed_transcript	4930443O20Rik	ENSMUST00000135659	processed_transcript		2	-1	85086461	1443
ENSMUSG00000033502	protein_coding	Cdc14a	ENSMUST00000199454	retained_intron		3	-1	116405488	2102
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000226454	retained_intron		15	-1	73209491	542
ENSMUSG00000061080	protein_coding	Lsamp	ENSMUST00000187695	protein_coding		16	1	39984371	3411
ENSMUSG00000056569	protein_coding	Mpz	ENSMUST00000125565	processed_transcript		1	1	171159703	436
ENSMUSG00000062908	protein_coding	Acadm	ENSMUST00000137161	retained_intron		3	-1	153944442	920
ENSMUSG00000033502	protein_coding	Cdc14a	ENSMUST00000136994	processed_transcript		3	-1	116423895	863
ENSMUSG00000062908	protein_coding	Acadm	ENSMUST00000130713	retained_intron		3	-1	153941903	532
ENSMUSG00000056569	protein_coding	Mpz	ENSMUST00000238940	protein_coding	principal2	1	1	171150713	1993
ENSMUSG00000032572	protein_coding	Col6a4	ENSMUST00000137847	processed_transcript		9	-1	106072409	596
ENSMUSG00000061080	protein_coding	Lsamp	ENSMUST00000189358	processed_transcript		16	1	39984386	2766
ENSMUSG00000090704	processed_pseudogene	Trp53-ps	ENSMUST00000166597	processed_pseudogene		17	1	54419680	1162
ENSMUSG00000061080	protein_coding	Lsamp	ENSMUST00000191610	processed_transcript		16	1	39984386	1297
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000153940	processed_transcript		4	1	119232946	2278
ENSMUSG00000082488	antisense	1700119I11Rik	ENSMUST00000122270	antisense		13	1	91861432	336
ENSMUSG00000103434	TEC	Gm36993	ENSMUST00000192983	TEC		9	1	106095474	2980
ENSMUSG00000111796	antisense	Gm47575	ENSMUST00000213434	antisense		9	1	106013530	736
ENSMUSG00000044338	protein_coding	Aplnr	ENSMUST00000057019	protein_coding	principal1	2	1	85136225	3699
ENSMUSG00000082488	antisense	1700119I11Rik	ENSMUST00000189130	antisense		13	1	91861485	256
ENSMUSG00000061080	protein_coding	Lsamp	ENSMUST00000189829	processed_transcript		16	1	39984595	2410
ENSMUSG00000044359	protein_coding	P2ry4	ENSMUST00000053373	protein_coding	principal1	X	-1	100594869	4434
ENSMUSG00000099717	processed_pseudogene	Gm9451	ENSMUST00000188491	processed_pseudogene		9	-1	106121899	604
ENSMUSG00000086221	lincRNA	4930412B13Rik	ENSMUST00000149239	lincRNA		2	1	117821928	1276
ENSMUSG00000062908	protein_coding	Acadm	ENSMUST00000135724	retained_intron		3	-1	153944463	437
ENSMUSG00000103266	TEC	Gm36979	ENSMUST00000193616	TEC		2	1	118039843	539
ENSMUSG00000051528	protein_coding	Olfr424	ENSMUST00000214751	protein_coding	principal1	1	1	174131517	1642
ENSMUSG00000100795	lincRNA	Gm29208	ENSMUST00000213687	lincRNA		9	-1	106128095	2219
ENSMUSG00000044338	protein_coding	Aplnr	ENSMUST00000184728	protein_coding		2	1	85137392	313
ENSMUSG00000079018	protein_coding	Ly6c1	ENSMUST00000179762	protein_coding	principal3	15	-1	75048813	838
ENSMUSG00000084858	unprocessed_pseudogene	Gm1980	ENSMUST00000123131	unprocessed_pseudogene		2	1	176298827	2306
ENSMUSG00000100795	lincRNA	Gm29208	ENSMUST00000213306	lincRNA		9	-1	106127075	945
ENSMUSG00000061080	protein_coding	Lsamp	ENSMUST00000078873	protein_coding		16	1	41532858	2951
ENSMUSG00000100795	lincRNA	Gm29208	ENSMUST00000187162	lincRNA		9	-1	106127085	900
ENSMUSG00000100795	lincRNA	Gm29208	ENSMUST00000214544	lincRNA		9	-1	106127085	1457
ENSMUSG00000078895	protein_coding	Gm11009	ENSMUST00000108961	protein_coding	principal1	2	-1	176319494	417
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000102662	protein_coding	principal3	4	1	119232946	2977
ENSMUSG00000100795	lincRNA	Gm29208	ENSMUST00000214517	lincRNA		9	-1	106127054	1056
ENSMUSG00000104764	sense_intronic	Gm43066	ENSMUST00000199589	sense_intronic		3	1	103601943	1260
ENSMUSG00000100795	lincRNA	Gm29208	ENSMUST00000216164	lincRNA		9	-1	106127098	1044
ENSMUSG00000004035	protein_coding	Gstm7	ENSMUST00000004137	protein_coding	principal1	3	-1	107931817	1377
ENSMUSG00000079018	protein_coding	Ly6c1	ENSMUST00000187347	protein_coding	principal3	15	-1	75048788	522
ENSMUSG00000100795	lincRNA	Gm29208	ENSMUST00000213710	lincRNA		9	-1	106127098	675
ENSMUSG00000051528	protein_coding	Olfr424	ENSMUST00000053941	protein_coding	principal1	1	1	174136746	948
ENSMUSG00000017868	protein_coding	Sgk2	ENSMUST00000018012	protein_coding	principal1	2	1	162987330	2693
ENSMUSG00000030270	protein_coding	Cpne9	ENSMUST00000041203	protein_coding	principal1	6	1	113282307	2777
ENSMUSG00000079018	protein_coding	Ly6c1	ENSMUST00000191216	protein_coding		15	-1	75048813	421
ENSMUSG00000036357	protein_coding	Gpr101	ENSMUST00000057645	protein_coding	principal1	X	-1	57503757	5410
ENSMUSG00000117316	processed_pseudogene	Gm4946	ENSMUST00000233322	processed_pseudogene		17	1	54507415	808
ENSMUSG00000004035	protein_coding	Gstm7	ENSMUST00000106687	protein_coding		3	-1	107931667	743
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000136278	nonsense_mediated_decay		4	1	119232954	2750
ENSMUSG00000089951	protein_coding	Zfp968-ps	ENSMUST00000108995	protein_coding	principal5	2	1	176423594	643
ENSMUSG00000079018	protein_coding	Ly6c1	ENSMUST00000185200	protein_coding		15	-1	75048804	540
ENSMUSG00000089951	protein_coding	Zfp968-ps	ENSMUST00000127687	protein_coding	alternative2	2	1	176423661	1127
ENSMUSG00000017868	protein_coding	Sgk2	ENSMUST00000117123	protein_coding		2	1	162987502	3034
ENSMUSG00000102371	transcribed_unprocessed_pseudogene	Olfr258-ps1	ENSMUST00000218625	processed_transcript		1	1	174140408	1085
ENSMUSG00000004035	protein_coding	Gstm7	ENSMUST00000106688	protein_coding		3	-1	107931614	783
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000223050	protein_coding	principal1	12	1	111417430	3418
ENSMUSG00000087203	processed_transcript	Gm13986	ENSMUST00000148587	processed_transcript		2	-1	118111202	3469
ENSMUSG00000089951	protein_coding	Zfp968-ps	ENSMUST00000172025	protein_coding		2	1	176431829	192
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000126056	processed_transcript		4	1	119233800	491
ENSMUSG00000081100	processed_pseudogene	Gm14630	ENSMUST00000118057	processed_pseudogene		X	-1	57631954	246
ENSMUSG00000034522	protein_coding	Zfp395	ENSMUST00000224623	protein_coding		14	1	65358389	354
ENSMUSG00000004035	protein_coding	Gstm7	ENSMUST00000133947	protein_coding		3	-1	107931579	609
ENSMUSG00000079018	protein_coding	Ly6c1	ENSMUST00000185372	protein_coding		15	-1	75048669	393
ENSMUSG00000004035	protein_coding	Gstm7	ENSMUST00000124215	protein_coding		3	-1	107931610	410
ENSMUSG00000102371	transcribed_unprocessed_pseudogene	Olfr258-ps1	ENSMUST00000192471	transcribed_unprocessed_pseudogene		1	1	174142260	891
ENSMUSG00000017868	protein_coding	Sgk2	ENSMUST00000139053	retained_intron		2	1	162998112	447
ENSMUSG00000083920	processed_pseudogene	Gm14987	ENSMUST00000117820	processed_pseudogene		X	-1	130513789	676
ENSMUSG00000034522	protein_coding	Zfp395	ENSMUST00000225865	processed_transcript		14	1	65358534	373
ENSMUSG00000087203	processed_transcript	Gm13986	ENSMUST00000138764	processed_transcript		2	-1	118111091	2562
ENSMUSG00000081896	processed_pseudogene	Gm5389	ENSMUST00000120893	processed_pseudogene		X	1	57659732	1176
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000043848	protein_coding	principal1	6	-1	125191701	4629
ENSMUSG00000117132	lincRNA	Gm32055	ENSMUST00000233856	lincRNA		17	1	54852562	819
ENSMUSG00000081891	processed_pseudogene	Gm14660	ENSMUST00000119809	processed_pseudogene		X	1	60818208	575
ENSMUSG00000086489	unprocessed_pseudogene	Gm16362	ENSMUST00000135189	unprocessed_pseudogene		2	-1	176452840	214
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000072646	protein_coding	principal1	12	1	111417445	2778
ENSMUSG00000005237	protein_coding	Dnah2	ENSMUST00000035539	protein_coding	alternative2	11	-1	69544556	13569
ENSMUSG00000084103	unprocessed_pseudogene	Gm14629	ENSMUST00000122428	unprocessed_pseudogene		X	-1	57670487	144
ENSMUSG00000081456	processed_pseudogene	Gm7781	ENSMUST00000117258	processed_pseudogene		X	1	130524637	788
ENSMUSG00000117340	processed_pseudogene	Gm49920	ENSMUST00000229170	processed_pseudogene		17	1	55063412	588
ENSMUSG00000111758	lincRNA	Gm30373	ENSMUST00000215774	lincRNA		9	-1	43970253	3500
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000223431	protein_coding		12	1	111417459	371
ENSMUSG00000061086	protein_coding	Myl4	ENSMUST00000018800	protein_coding	principal1	11	1	104550663	879
ENSMUSG00000005237	protein_coding	Dnah2	ENSMUST00000151811	processed_transcript		11	-1	69465694	924
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000188665	retained_intron		6	-1	125171090	646
ENSMUSG00000117249	processed_pseudogene	Gm46577	ENSMUST00000233678	processed_pseudogene		17	1	55143175	372
ENSMUSG00000111758	lincRNA	Gm30373	ENSMUST00000217507	lincRNA		9	-1	43970171	2709
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000188410	retained_intron		6	-1	125171806	480
ENSMUSG00000086296	antisense	D030055H07Rik	ENSMUST00000143956	antisense		9	1	106148687	2712
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000221144	protein_coding		12	1	111417476	679
ENSMUSG00000080710	processed_pseudogene	Gm8107	ENSMUST00000117477	processed_pseudogene		X	-1	57738555	2009
ENSMUSG00000091950	polymorphic_pseudogene	Olfr421-ps1	ENSMUST00000179386	polymorphic_pseudogene	principal1	1	1	174151481	1050
ENSMUSG00000061086	protein_coding	Myl4	ENSMUST00000153761	protein_coding		11	1	104575446	702
ENSMUSG00000061080	protein_coding	Lsamp	ENSMUST00000099761	protein_coding	principal1	16	1	41533037	8794
ENSMUSG00000084394	processed_pseudogene	Gm8111	ENSMUST00000117659	processed_pseudogene		X	-1	57746303	987
ENSMUSG00000086296	antisense	D030055H07Rik	ENSMUST00000150953	antisense		9	1	106154952	4325
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000222437	protein_coding		12	1	111417476	634
ENSMUSG00000078881	protein_coding	Gm14434	ENSMUST00000122097	protein_coding	principal1	2	-1	176483160	1497
ENSMUSG00000083821	processed_pseudogene	Gm14631	ENSMUST00000119067	processed_pseudogene		X	-1	57753868	594
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000081606	protein_coding	alternative2	4	1	119233832	2820
ENSMUSG00000086296	antisense	D030055H07Rik	ENSMUST00000160569	antisense		9	1	106156340	599
ENSMUSG00000061080	protein_coding	Lsamp	ENSMUST00000187185	processed_transcript		16	1	41533419	500
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000220636	retained_intron		12	1	111417619	683
ENSMUSG00000045179	protein_coding	Sox3	ENSMUST00000135107	protein_coding	principal1	X	-1	60893430	2065
ENSMUSG00000061086	protein_coding	Myl4	ENSMUST00000106957	protein_coding	principal1	11	1	104576985	943
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000185624	retained_intron		6	-1	125173909	825
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000220852	protein_coding		12	1	111420589	696
ENSMUSG00000111637	lincRNA	Gm10688	ENSMUST00000214985	lincRNA		9	-1	43979477	520
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000131875	processed_transcript		4	1	119235344	624
ENSMUSG00000078881	protein_coding	Gm14434	ENSMUST00000120959	protein_coding		2	-1	176486773	1458
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000222897	protein_coding	principal1	12	1	111421561	2665
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000123963	processed_transcript		4	1	119237942	498
ENSMUSG00000078881	protein_coding	Gm14434	ENSMUST00000120521	protein_coding		2	-1	176486783	559
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000186667	retained_intron		6	-1	125173891	745
ENSMUSG00000087565	antisense	Gm14662	ENSMUST00000145552	antisense		X	1	60893653	734
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000142361	processed_transcript		4	1	119245020	525
ENSMUSG00000078651	protein_coding	Aoc2	ENSMUST00000041095	protein_coding	principal1	11	1	101325063	2543
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000222262	retained_intron		12	1	111428345	369
ENSMUSG00000086577	processed_pseudogene	Gm7076	ENSMUST00000152421	processed_pseudogene		X	-1	60907167	456
ENSMUSG00000005237	protein_coding	Dnah2	ENSMUST00000149991	processed_transcript		11	-1	69549110	2616
ENSMUSG00000021280	protein_coding	Exoc3l4	ENSMUST00000223369	retained_intron		12	1	111429254	774
ENSMUSG00000083024	processed_pseudogene	Gm14982	ENSMUST00000121102	processed_pseudogene		X	-1	130561897	442
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000134548	processed_transcript		4	1	119246639	714
ENSMUSG00000061080	protein_coding	Lsamp	ENSMUST00000145951	protein_coding		16	1	42143984	634
ENSMUSG00000081323	processed_pseudogene	Rpl7l1-ps1	ENSMUST00000118822	processed_pseudogene		X	-1	60972714	725
ENSMUSG00000061086	protein_coding	Myl4	ENSMUST00000130588	nonsense_mediated_decay		11	1	104577017	781
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000189706	retained_intron		6	-1	125174529	688
ENSMUSG00000005237	protein_coding	Dnah2	ENSMUST00000208777	protein_coding		11	-1	69518389	696
ENSMUSG00000084256	processed_pseudogene	Gm14976	ENSMUST00000117055	processed_pseudogene		X	-1	131019078	1394
ENSMUSG00000097081	antisense	Gm10425	ENSMUST00000181085	antisense		12	-1	111430946	3364
ENSMUSG00000028641	protein_coding	P3h1	ENSMUST00000127087	retained_intron		4	1	119246862	650
ENSMUSG00000061080	protein_coding	Lsamp	ENSMUST00000133853	protein_coding		16	1	42144025	456
ENSMUSG00000078651	protein_coding	Aoc2	ENSMUST00000107264	protein_coding		11	1	101325087	2230
ENSMUSG00000087401	lincRNA	Gm14664	ENSMUST00000142919	lincRNA		X	1	61041741	437
ENSMUSG00000102417	TEC	Gm36939	ENSMUST00000194889	TEC		16	1	40309433	439
ENSMUSG00000092401	polymorphic_pseudogene	Olfr300-ps1	ENSMUST00000174262	polymorphic_pseudogene	principal1	7	1	86435913	2395
ENSMUSG00000094257	processed_pseudogene	Ap3s1-ps2	ENSMUST00000178107	processed_pseudogene		8	1	94405211	579
ENSMUSG00000005237	protein_coding	Dnah2	ENSMUST00000154985	processed_transcript		11	-1	69516755	386
ENSMUSG00000101463	antisense	Gm28750	ENSMUST00000186327	antisense		16	-1	41431092	658
ENSMUSG00000061086	protein_coding	Myl4	ENSMUST00000106956	protein_coding	principal1	11	1	104577281	900
ENSMUSG00000034522	protein_coding	Zfp395	ENSMUST00000066994	protein_coding	principal1	14	1	65358676	4229
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000191080	retained_intron		6	-1	125176738	670
ENSMUSG00000020168	protein_coding	Olfr299	ENSMUST00000217253	protein_coding	principal1	7	1	86459921	4479
ENSMUSG00000005237	protein_coding	Dnah2	ENSMUST00000108659	protein_coding	principal2	11	-1	69549108	13704
ENSMUSG00000044703	protein_coding	Phf11a	ENSMUST00000062307	protein_coding	principal1	14	-1	59297522	1354
ENSMUSG00000095199	protein_coding	Zfp967	ENSMUST00000238585	protein_coding		2	1	176521000	461
ENSMUSG00000095199	protein_coding	Zfp967	ENSMUST00000238250	protein_coding		2	1	176521000	841
ENSMUSG00000095199	protein_coding	Zfp967	ENSMUST00000238206	protein_coding		2	1	176521002	339
ENSMUSG00000020168	protein_coding	Olfr299	ENSMUST00000057734	protein_coding	principal1	7	1	86465413	993
ENSMUSG00000034522	protein_coding	Zfp395	ENSMUST00000224687	protein_coding		14	1	65375393	456
ENSMUSG00000061086	protein_coding	Myl4	ENSMUST00000123074	retained_intron		11	1	104580325	677
ENSMUSG00000086591	antisense	Dnah2os	ENSMUST00000124108	antisense		11	1	69448548	859
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000186561	retained_intron		6	-1	125177390	617
ENSMUSG00000095199	protein_coding	Zfp967	ENSMUST00000108997	protein_coding		2	1	176521004	733
ENSMUSG00000061086	protein_coding	Myl4	ENSMUST00000155271	retained_intron		11	1	104582039	3273
ENSMUSG00000034522	protein_coding	Zfp395	ENSMUST00000225512	retained_intron		14	1	65395680	811
ENSMUSG00000061086	protein_coding	Myl4	ENSMUST00000136244	protein_coding		11	1	104584964	486
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000188306	retained_intron		6	-1	125179412	630
ENSMUSG00000082706	processed_pseudogene	Gm11663	ENSMUST00000117888	processed_pseudogene		11	-1	104571557	290
ENSMUSG00000095199	protein_coding	Zfp967	ENSMUST00000238365	protein_coding		2	1	176521026	753
ENSMUSG00000114357	antisense	Gm48449	ENSMUST00000225691	antisense		14	-1	65359410	221
ENSMUSG00000095199	protein_coding	Zfp967	ENSMUST00000238420	protein_coding		2	1	176521041	750
ENSMUSG00000033004	protein_coding	Mycbp2	ENSMUST00000161008	protein_coding		14	-1	103155263	5099
ENSMUSG00000095199	protein_coding	Zfp967	ENSMUST00000178443	protein_coding	principal1	2	1	176521056	1458
ENSMUSG00000083999	processed_pseudogene	Gm7790	ENSMUST00000118716	processed_pseudogene		X	-1	131173748	1310
ENSMUSG00000086932	processed_transcript	Gm22000	ENSMUST00000153087	processed_transcript		11	-1	104565661	730
ENSMUSG00000079346	lincRNA	1700013D24Rik	ENSMUST00000203817	lincRNA		6	-1	124357069	513
ENSMUSG00000053461	protein_coding	Hhipl2	ENSMUST00000195809	processed_transcript		1	1	183418215	241
ENSMUSG00000086222	antisense	Gm11665	ENSMUST00000148136	antisense		11	-1	104557777	285
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000188762	nonsense_mediated_decay		6	-1	125191603	877
ENSMUSG00000081072	processed_pseudogene	Gm14977	ENSMUST00000121626	processed_pseudogene		X	-1	131559516	812
ENSMUSG00000094360	unprocessed_pseudogene	Gm14307	ENSMUST00000118930	unprocessed_pseudogene		2	-1	176602496	291
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000186210	retained_intron		6	-1	125186595	682
ENSMUSG00000107737	lincRNA	1700027F06Rik	ENSMUST00000203901	lincRNA		6	-1	124364519	243
ENSMUSG00000082117	processed_pseudogene	Gm4994	ENSMUST00000118379	processed_pseudogene		X	-1	131850073	2187
ENSMUSG00000038252	protein_coding	Ncapd2	ENSMUST00000189959	protein_coding		6	-1	125191490	604
ENSMUSG00000091694	protein_coding	Apol11b	ENSMUST00000166623	protein_coding	principal1	15	-1	77643286	2062
ENSMUSG00000107988	lincRNA	Gm44006	ENSMUST00000204273	lincRNA		6	1	124372162	396
ENSMUSG00000099587	sense_intronic	Gm28967	ENSMUST00000187351	sense_intronic		6	-1	125186641	281
ENSMUSG00000108026	TEC	Gm44007	ENSMUST00000203845	TEC		6	-1	124384160	2189
ENSMUSG00000113830	lincRNA	1700127F24Rik	ENSMUST00000221685	lincRNA		12	-1	112875814	604
ENSMUSG00000049571	protein_coding	Cfap46	ENSMUST00000166503	retained_intron		7	-1	139616309	1438
ENSMUSG00000082429	processed_pseudogene	Gm13171	ENSMUST00000117233	processed_pseudogene		4	-1	155502706	391
ENSMUSG00000033845	protein_coding	Mrpl15	ENSMUST00000130201	protein_coding		1	-1	4785710	1894
ENSMUSG00000091694	protein_coding	Apol11b	ENSMUST00000181467	processed_transcript		15	-1	77643286	1933
ENSMUSG00000113830	lincRNA	1700127F24Rik	ENSMUST00000223214	lincRNA		12	-1	112875701	259
ENSMUSG00000078880	protein_coding	Gm14308	ENSMUST00000126807	processed_transcript		2	-1	176625630	685
ENSMUSG00000114904	protein_coding	Gm49352	ENSMUST00000225902	protein_coding	principal1	13	-1	61568174	502
ENSMUSG00000049571	protein_coding	Cfap46	ENSMUST00000093991	retained_intron		7	-1	139616309	1518
ENSMUSG00000062878	protein_coding	Olfr298	ENSMUST00000213223	protein_coding	principal1	7	-1	86492483	3273
ENSMUSG00000091694	protein_coding	Apol11b	ENSMUST00000180949	protein_coding	principal1	15	-1	77643278	2261
ENSMUSG00000062878	protein_coding	Olfr298	ENSMUST00000216968	protein_coding	principal1	7	-1	86492484	3451
ENSMUSG00000062878	protein_coding	Olfr298	ENSMUST00000217110	protein_coding	principal1	7	-1	86492478	3549
ENSMUSG00000091694	protein_coding	Apol11b	ENSMUST00000181154	protein_coding		15	-1	77643270	743
ENSMUSG00000062878	protein_coding	Olfr298	ENSMUST00000077800	protein_coding	principal1	7	-1	86489549	999
ENSMUSG00000058806	protein_coding	Col13a1	ENSMUST00000145469	protein_coding		10	-1	61866413	1204
ENSMUSG00000027011	protein_coding	Ube2e3	ENSMUST00000124120	protein_coding		2	1	78868124	625
ENSMUSG00000016554	protein_coding	Eif3d	ENSMUST00000100484	protein_coding	principal1	15	-1	77970813	1899
ENSMUSG00000020684	protein_coding	Rasl10b	ENSMUST00000021022	protein_coding	principal1	11	1	83409137	996
ENSMUSG00000022176	protein_coding	Rem2	ENSMUST00000164766	protein_coding	principal1	14	1	54476100	1884
ENSMUSG00000055033	protein_coding	Olfr420	ENSMUST00000213748	protein_coding	principal1	1	1	174155633	3806
ENSMUSG00000078880	protein_coding	Gm14308	ENSMUST00000108990	protein_coding	principal1	2	-1	176636318	1628
ENSMUSG00000016554	protein_coding	Eif3d	ENSMUST00000229824	retained_intron		15	-1	77960481	742
ENSMUSG00000055033	protein_coding	Olfr420	ENSMUST00000068403	protein_coding	principal1	1	1	174158722	1046
ENSMUSG00000016554	protein_coding	Eif3d	ENSMUST00000230711	retained_intron		15	-1	77963772	673
ENSMUSG00000022176	protein_coding	Rem2	ENSMUST00000170337	retained_intron		14	1	54476240	556
ENSMUSG00000078880	protein_coding	Gm14308	ENSMUST00000119149	protein_coding		2	-1	176636343	1458
ENSMUSG00000022176	protein_coding	Rem2	ENSMUST00000164697	protein_coding		14	1	54476252	1194
ENSMUSG00000016554	protein_coding	Eif3d	ENSMUST00000229737	retained_intron		15	-1	77964178	248
ENSMUSG00000078880	protein_coding	Gm14308	ENSMUST00000117267	protein_coding		2	-1	176636344	777
ENSMUSG00000033467	protein_coding	Crlf2	ENSMUST00000200284	protein_coding	alternative2	5	-1	109558936	1405
ENSMUSG00000022176	protein_coding	Rem2	ENSMUST00000168930	protein_coding		14	1	54477471	513
ENSMUSG00000033845	protein_coding	Mrpl15	ENSMUST00000156816	protein_coding	principal1	1	-1	4785739	4203
ENSMUSG00000082205	processed_pseudogene	Gm7058	ENSMUST00000119209	processed_pseudogene		X	-1	132170107	902
ENSMUSG00000030270	protein_coding	Cpne9	ENSMUST00000132372	retained_intron		6	1	113282307	3906
ENSMUSG00000083543	processed_pseudogene	Gm14663	ENSMUST00000118474	processed_pseudogene		X	1	61090582	1153
ENSMUSG00000078972	protein_coding	Gm15557	ENSMUST00000109629	protein_coding	principal1	2	1	155940728	1380
ENSMUSG00000020684	protein_coding	Rasl10b	ENSMUST00000175848	protein_coding		11	1	83409688	3249
ENSMUSG00000016554	protein_coding	Eif3d	ENSMUST00000229413	retained_intron		15	-1	77968523	590
ENSMUSG00000082537	processed_pseudogene	Gm14981	ENSMUST00000117325	processed_pseudogene		X	-1	132188258	943
ENSMUSG00000033845	protein_coding	Mrpl15	ENSMUST00000045689	nonsense_mediated_decay		1	-1	4785698	497
ENSMUSG00000020684	protein_coding	Rasl10b	ENSMUST00000108140	protein_coding	principal1	11	1	83409688	3156
ENSMUSG00000030270	protein_coding	Cpne9	ENSMUST00000130191	nonsense_mediated_decay		6	1	113282310	2115
ENSMUSG00000016554	protein_coding	Eif3d	ENSMUST00000230419	protein_coding		15	-1	77970645	706
ENSMUSG00000001833	protein_coding	Septin7	ENSMUST00000165594	protein_coding	principal2	9	1	25252451	2516
ENSMUSG00000030270	protein_coding	Cpne9	ENSMUST00000124574	retained_intron		6	1	113282335	482
ENSMUSG00000033845	protein_coding	Mrpl15	ENSMUST00000115538	processed_transcript		1	-1	4785739	910
ENSMUSG00000038259	protein_coding	Gdf5	ENSMUST00000040162	protein_coding	principal1	2	-1	155945367	2320
ENSMUSG00000020684	protein_coding	Rasl10b	ENSMUST00000164425	protein_coding	principal1	11	1	83410072	3481
ENSMUSG00000030270	protein_coding	Cpne9	ENSMUST00000204050	retained_intron		6	1	113282336	2933
ENSMUSG00000033845	protein_coding	Mrpl15	ENSMUST00000192286	retained_intron		1	-1	4784566	4600
ENSMUSG00000016554	protein_coding	Eif3d	ENSMUST00000229784	retained_intron		15	-1	77970797	2546
ENSMUSG00000033845	protein_coding	Mrpl15	ENSMUST00000146665	protein_coding		1	-1	4785739	1569
ENSMUSG00000027849	protein_coding	Syt6	ENSMUST00000121834	protein_coding	principal3	3	1	103575231	1710
ENSMUSG00000016554	protein_coding	Eif3d	ENSMUST00000229713	processed_transcript		15	-1	77970797	395
ENSMUSG00000030270	protein_coding	Cpne9	ENSMUST00000128148	retained_intron		6	1	113282339	449
ENSMUSG00000053461	protein_coding	Hhipl2	ENSMUST00000065900	protein_coding	principal1	1	1	183418462	2525
ENSMUSG00000107114	unprocessed_pseudogene	Gm43440	ENSMUST00000201957	unprocessed_pseudogene		1	1	174167702	729
ENSMUSG00000033467	protein_coding	Crlf2	ENSMUST00000044579	protein_coding	principal3	5	-1	109558993	1323
ENSMUSG00000033845	protein_coding	Mrpl15	ENSMUST00000132625	retained_intron		1	-1	4785692	654
ENSMUSG00000030270	protein_coding	Cpne9	ENSMUST00000155779	processed_transcript		6	1	113282364	347
ENSMUSG00000030270	protein_coding	Cpne9	ENSMUST00000138388	processed_transcript		6	1	113282365	412
ENSMUSG00000018401	protein_coding	Mtmr4	ENSMUST00000103179	protein_coding	principal1	11	1	87592162	5753
ENSMUSG00000027011	protein_coding	Ube2e3	ENSMUST00000130914	protein_coding		2	1	78868238	504
ENSMUSG00000020258	protein_coding	Glyctk	ENSMUST00000036382	protein_coding	principal1	9	-1	106158118	4209
ENSMUSG00000102275	TEC	Gm37144	ENSMUST00000195445	TEC		1	-1	4779212	1150
ENSMUSG00000117283	processed_pseudogene	Gm4471	ENSMUST00000233154	processed_pseudogene		17	1	55247730	907
ENSMUSG00000053461	protein_coding	Hhipl2	ENSMUST00000193862	processed_transcript		1	1	183418559	429
ENSMUSG00000115470	processed_pseudogene	Gm18683	ENSMUST00000228234	processed_pseudogene		14	1	73933027	583
ENSMUSG00000030270	protein_coding	Cpne9	ENSMUST00000134523	retained_intron		6	1	113288504	4143
ENSMUSG00000033467	protein_coding	Crlf2	ENSMUST00000198960	protein_coding		5	-1	109556473	812
ENSMUSG00000018401	protein_coding	Mtmr4	ENSMUST00000092802	protein_coding		11	1	87592219	5525
ENSMUSG00000001833	protein_coding	Septin7	ENSMUST00000215692	processed_transcript		9	1	25252576	444
ENSMUSG00000068689	processed_pseudogene	Rps19-ps9	ENSMUST00000161787	processed_pseudogene		6	-1	87948877	414
ENSMUSG00000053461	protein_coding	Hhipl2	ENSMUST00000192527	protein_coding		1	1	183419248	2310
ENSMUSG00000030270	protein_coding	Cpne9	ENSMUST00000136728	processed_transcript		6	1	113294325	522
ENSMUSG00000001833	protein_coding	Septin7	ENSMUST00000215721	processed_transcript		9	1	25252648	1685
ENSMUSG00000090790	processed_pseudogene	Gm17377	ENSMUST00000165184	processed_pseudogene		17	1	55321612	206
ENSMUSG00000057886	processed_pseudogene	Cbx3-ps6	ENSMUST00000181108	processed_pseudogene		14	-1	73955551	552
ENSMUSG00000018401	protein_coding	Mtmr4	ENSMUST00000146871	protein_coding		11	1	87592226	418
ENSMUSG00000107812	TEC	Gm43935	ENSMUST00000203569	TEC		6	-1	113306674	1050
ENSMUSG00000104022	sense_intronic	Gm37214	ENSMUST00000192860	sense_intronic		1	1	183420655	916
ENSMUSG00000117090	processed_pseudogene	Gm49921	ENSMUST00000233569	processed_pseudogene		17	-1	55388707	464
ENSMUSG00000085987	lincRNA	Gm13403	ENSMUST00000127936	lincRNA		2	-1	33942113	3651
ENSMUSG00000018401	protein_coding	Mtmr4	ENSMUST00000123105	protein_coding		11	1	87592464	437
ENSMUSG00000085987	lincRNA	Gm13403	ENSMUST00000134271	lincRNA		2	-1	33942145	674
ENSMUSG00000115088	lincRNA	Gm49165	ENSMUST00000226391	lincRNA		14	-1	73732016	2929
ENSMUSG00000001833	protein_coding	Septin7	ENSMUST00000213980	processed_transcript		9	1	25252649	1727
ENSMUSG00000075581	processed_pseudogene	Gm16409	ENSMUST00000100510	processed_pseudogene		14	-1	73797290	747
ENSMUSG00000106329	TEC	Gm10652	ENSMUST00000199790	TEC		3	1	121168656	2622
ENSMUSG00000018401	protein_coding	Mtmr4	ENSMUST00000119628	protein_coding	principal1	11	1	87592897	4664
ENSMUSG00000115289	lincRNA	Gm49164	ENSMUST00000226696	lincRNA		14	1	73728568	628
ENSMUSG00000115289	lincRNA	Gm49164	ENSMUST00000228430	lincRNA		14	1	73732563	496
ENSMUSG00000027011	protein_coding	Ube2e3	ENSMUST00000028398	protein_coding	principal1	2	1	78869047	2249
ENSMUSG00000001833	protein_coding	Septin7	ENSMUST00000217598	retained_intron		9	1	25252666	4569
ENSMUSG00000058806	protein_coding	Col13a1	ENSMUST00000105451	processed_transcript		10	-1	61878392	1948
ENSMUSG00000115289	lincRNA	Gm49164	ENSMUST00000228116	lincRNA		14	1	73909285	1244
ENSMUSG00000029322	protein_coding	Plac8	ENSMUST00000031264	protein_coding	principal1	5	-1	100572245	744
ENSMUSG00000001833	protein_coding	Septin7	ENSMUST00000214911	retained_intron		9	1	25264064	532
ENSMUSG00000027011	protein_coding	Ube2e3	ENSMUST00000153614	retained_intron		2	1	78869240	1317
ENSMUSG00000001833	protein_coding	Septin7	ENSMUST00000214520	processed_transcript		9	1	25265394	340
ENSMUSG00000083177	processed_pseudogene	Gm7820	ENSMUST00000121012	processed_pseudogene		X	-1	132889159	1052
ENSMUSG00000018401	protein_coding	Mtmr4	ENSMUST00000134216	protein_coding		11	1	87595652	792
ENSMUSG00000109754	lincRNA	Gm39214	ENSMUST00000210912	lincRNA		8	1	85730816	1542
ENSMUSG00000027011	protein_coding	Ube2e3	ENSMUST00000138864	retained_intron		2	1	78869334	632
ENSMUSG00000001833	protein_coding	Septin7	ENSMUST00000213435	retained_intron		9	1	25299336	2864
ENSMUSG00000001833	protein_coding	Septin7	ENSMUST00000214360	retained_intron		9	1	25305269	2251
ENSMUSG00000049571	protein_coding	Cfap46	ENSMUST00000155075	nonsense_mediated_decay		7	-1	139661107	2981
ENSMUSG00000026418	protein_coding	Tnni1	ENSMUST00000152208	protein_coding	principal1	1	1	135799402	1105
ENSMUSG00000027011	protein_coding	Ube2e3	ENSMUST00000121433	protein_coding	principal1	2	1	78869678	1235
ENSMUSG00000029322	protein_coding	Plac8	ENSMUST00000097437	protein_coding	principal1	5	-1	100562858	738
ENSMUSG00000027849	protein_coding	Syt6	ENSMUST00000132325	nonsense_mediated_decay		3	1	103575282	4264
ENSMUSG00000020258	protein_coding	Glyctk	ENSMUST00000112543	protein_coding	principal1	9	-1	106158138	4081
ENSMUSG00000027011	protein_coding	Ube2e3	ENSMUST00000153266	retained_intron		2	1	78918393	537
ENSMUSG00000001833	protein_coding	Septin7	ENSMUST00000115272	protein_coding	alternative1	9	1	25252439	2533
ENSMUSG00000074871	protein_coding	Ctsm	ENSMUST00000223778	protein_coding	principal1	13	-1	61541839	1905
ENSMUSG00000026418	protein_coding	Tnni1	ENSMUST00000137331	processed_transcript		1	1	135799421	604
ENSMUSG00000026418	protein_coding	Tnni1	ENSMUST00000152075	protein_coding	principal1	1	1	135799421	1038
ENSMUSG00000111004	processed_pseudogene	Gm48272	ENSMUST00000214972	processed_pseudogene		9	-1	25275475	674
ENSMUSG00000027849	protein_coding	Syt6	ENSMUST00000136049	nonsense_mediated_decay		3	1	103575300	1903
ENSMUSG00000027849	protein_coding	Syt6	ENSMUST00000151985	nonsense_mediated_decay		3	1	103575378	1527
ENSMUSG00000020258	protein_coding	Glyctk	ENSMUST00000217417	protein_coding		9	-1	106157250	792
ENSMUSG00000114532	antisense	2610318M16Rik	ENSMUST00000225127	antisense		14	1	8367440	578
ENSMUSG00000029322	protein_coding	Plac8	ENSMUST00000112910	protein_coding	principal1	5	-1	100563423	1224
ENSMUSG00000040997	protein_coding	Abhd4	ENSMUST00000180359	protein_coding	principal2	14	1	54254188	2508
ENSMUSG00000027849	protein_coding	Syt6	ENSMUST00000239027	protein_coding	alternative2	3	1	103575378	1590
ENSMUSG00000039804	protein_coding	Ncoa5	ENSMUST00000040381	protein_coding	principal2	2	-1	165034867	3179
ENSMUSG00000020258	protein_coding	Glyctk	ENSMUST00000162562	protein_coding		9	-1	106158117	537
ENSMUSG00000026418	protein_coding	Tnni1	ENSMUST00000154463	protein_coding	principal1	1	1	135799511	749
ENSMUSG00000029322	protein_coding	Plac8	ENSMUST00000144595	retained_intron		5	-1	100572192	373
ENSMUSG00000085804	lincRNA	Gm12973	ENSMUST00000143967	lincRNA		4	1	130974790	607
ENSMUSG00000049571	protein_coding	Cfap46	ENSMUST00000140820	nonsense_mediated_decay		7	-1	139683817	4428
ENSMUSG00000031727	protein_coding	Pmfbp1	ENSMUST00000034162	protein_coding	principal1	8	1	109494027	3396
ENSMUSG00000020258	protein_coding	Glyctk	ENSMUST00000159809	protein_coding		9	-1	106158110	375
ENSMUSG00000027849	protein_coding	Syt6	ENSMUST00000183637	protein_coding		3	1	103576081	578
ENSMUSG00000040997	protein_coding	Abhd4	ENSMUST00000199338	protein_coding		14	1	54254214	868
ENSMUSG00000078878	protein_coding	Gm14305	ENSMUST00000108981	protein_coding	principal1	2	1	176708328	1646
ENSMUSG00000078878	protein_coding	Gm14305	ENSMUST00000108980	protein_coding		2	1	176708355	1167
ENSMUSG00000026418	protein_coding	Tnni1	ENSMUST00000139986	protein_coding		1	1	135799519	651
ENSMUSG00000074871	protein_coding	Ctsm	ENSMUST00000225965	protein_coding		13	-1	61538939	681
ENSMUSG00000078878	protein_coding	Gm14305	ENSMUST00000108983	protein_coding	principal1	2	1	176711933	1497
ENSMUSG00000086262	lincRNA	A930031H19Rik	ENSMUST00000130882	lincRNA		4	-1	131005952	863
ENSMUSG00000074871	protein_coding	Ctsm	ENSMUST00000225268	protein_coding		13	-1	61538468	478
ENSMUSG00000086262	lincRNA	A930031H19Rik	ENSMUST00000153810	lincRNA		4	-1	131010474	949
ENSMUSG00000026418	protein_coding	Tnni1	ENSMUST00000148201	protein_coding	principal1	1	1	135799833	1150
ENSMUSG00000078879	protein_coding	Zfp973	ENSMUST00000121956	protein_coding		2	1	176670522	1271
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000073104	protein_coding	principal3	17	1	65783355	3850
ENSMUSG00000032724	protein_coding	Abtb2	ENSMUST00000076212	protein_coding	principal1	2	1	103566310	4558
ENSMUSG00000039804	protein_coding	Ncoa5	ENSMUST00000121377	protein_coding		2	-1	165034817	2930
ENSMUSG00000078879	protein_coding	Zfp973	ENSMUST00000108985	protein_coding	principal1	2	1	176670562	1295
ENSMUSG00000074871	protein_coding	Ctsm	ENSMUST00000099451	protein_coding	principal1	13	-1	61541839	1457
ENSMUSG00000026418	protein_coding	Tnni1	ENSMUST00000129217	protein_coding		1	1	135805057	721
ENSMUSG00000086368	lincRNA	Gm13830	ENSMUST00000149609	lincRNA		5	1	115301120	1851
ENSMUSG00000086368	lincRNA	Gm13830	ENSMUST00000201195	lincRNA		5	1	115301136	1155
ENSMUSG00000032724	protein_coding	Abtb2	ENSMUST00000131122	processed_transcript		2	1	103715081	2875
ENSMUSG00000031727	protein_coding	Pmfbp1	ENSMUST00000212003	processed_transcript		8	1	109495044	3451
ENSMUSG00000086368	lincRNA	Gm13830	ENSMUST00000144202	lincRNA		5	1	115301137	381
ENSMUSG00000078879	protein_coding	Zfp973	ENSMUST00000141122	nonsense_mediated_decay		2	1	176670580	697
ENSMUSG00000040997	protein_coding	Abhd4	ENSMUST00000041197	protein_coding	alternative1	14	1	54259232	2401
ENSMUSG00000032724	protein_coding	Abtb2	ENSMUST00000138580	processed_transcript		2	1	103715035	709
ENSMUSG00000086368	lincRNA	Gm13830	ENSMUST00000124378	lincRNA		5	1	115301147	417
ENSMUSG00000039804	protein_coding	Ncoa5	ENSMUST00000122070	protein_coding	alternative2	2	-1	165034788	3117
ENSMUSG00000083205	processed_pseudogene	Gm7821	ENSMUST00000117111	processed_pseudogene		X	-1	133030991	788
ENSMUSG00000027849	protein_coding	Syt6	ENSMUST00000117221	protein_coding	alternative2	3	1	103576126	4394
ENSMUSG00000086368	lincRNA	Gm13830	ENSMUST00000148916	lincRNA		5	1	115301207	247
ENSMUSG00000040997	protein_coding	Abhd4	ENSMUST00000197802	retained_intron		14	1	54259273	647
ENSMUSG00000039804	protein_coding	Ncoa5	ENSMUST00000123347	retained_intron		2	-1	165004663	846
ENSMUSG00000027997	protein_coding	Casp6	ENSMUST00000029626	protein_coding	principal1	3	1	129901425	1456
ENSMUSG00000021749	protein_coding	Oit1	ENSMUST00000022269	protein_coding	principal1	14	-1	8378754	1253
ENSMUSG00000057067	protein_coding	Olfr297	ENSMUST00000172965	protein_coding	principal1	7	1	86519968	1928
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000160664	protein_coding	alternative2	17	1	65783366	3784
ENSMUSG00000057067	protein_coding	Olfr297	ENSMUST00000071112	protein_coding	principal1	7	1	86526759	933
ENSMUSG00000040997	protein_coding	Abhd4	ENSMUST00000196699	nonsense_mediated_decay		14	1	54259279	551
ENSMUSG00000039804	protein_coding	Ncoa5	ENSMUST00000127545	retained_intron		2	-1	165034803	916
ENSMUSG00000027849	protein_coding	Syt6	ENSMUST00000118117	protein_coding	alternative2	3	1	103576142	1856
ENSMUSG00000108227	TEC	4933412L11Rik	ENSMUST00000203702	TEC		6	-1	87994179	1044
ENSMUSG00000040997	protein_coding	Abhd4	ENSMUST00000197605	protein_coding		14	1	54259307	737
ENSMUSG00000021749	protein_coding	Oit1	ENSMUST00000224529	protein_coding		14	-1	8378722	615
ENSMUSG00000092293	unprocessed_pseudogene	Gm17919	ENSMUST00000173344	unprocessed_pseudogene		7	-1	86542661	312
ENSMUSG00000108268	TEC	Gm44187	ENSMUST00000204735	TEC		6	-1	88042467	1929
ENSMUSG00000027997	protein_coding	Casp6	ENSMUST00000137314	processed_transcript		3	1	129901458	477
ENSMUSG00000040997	protein_coding	Abhd4	ENSMUST00000199068	protein_coding		14	1	54262976	716
ENSMUSG00000027849	protein_coding	Syt6	ENSMUST00000118563	protein_coding		3	1	103576142	1843
ENSMUSG00000078531	lincRNA	Gm831	ENSMUST00000149942	lincRNA		4	1	131487197	4517
ENSMUSG00000027997	protein_coding	Casp6	ENSMUST00000197175	retained_intron		3	1	129901501	3914
ENSMUSG00000039804	protein_coding	Ncoa5	ENSMUST00000153905	protein_coding		2	-1	165034829	369
ENSMUSG00000092372	polymorphic_pseudogene	Olfr296-ps1	ENSMUST00000173904	polymorphic_pseudogene	principal1	7	1	86559478	1102
ENSMUSG00000039804	protein_coding	Ncoa5	ENSMUST00000126685	processed_transcript		2	-1	165023213	438
ENSMUSG00000027997	protein_coding	Casp6	ENSMUST00000152622	retained_intron		3	1	129910462	664
ENSMUSG00000040997	protein_coding	Abhd4	ENSMUST00000197807	nonsense_mediated_decay		14	1	54263281	564
ENSMUSG00000027849	protein_coding	Syt6	ENSMUST00000090697	protein_coding	principal3	3	1	103575281	4416
ENSMUSG00000102286	TEC	Gm37004	ENSMUST00000193021	TEC		2	1	78972672	683
ENSMUSG00000039804	protein_coding	Ncoa5	ENSMUST00000141663	retained_intron		2	-1	165034787	376
ENSMUSG00000083950	processed_pseudogene	Gm14466	ENSMUST00000119028	processed_pseudogene		2	-1	79023271	451
ENSMUSG00000103451	lincRNA	Gm33973	ENSMUST00000195148	lincRNA		1	1	183563512	534
ENSMUSG00000040997	protein_coding	Abhd4	ENSMUST00000239403	protein_coding		14	1	54259232	2406
ENSMUSG00000080984	processed_pseudogene	Gm14469	ENSMUST00000118363	processed_pseudogene		2	-1	79038734	202
ENSMUSG00000087119	protein_coding	Atg4a-ps	ENSMUST00000117271	protein_coding	principal1	3	-1	103646068	2115
ENSMUSG00000059319	protein_coding	Olfr295	ENSMUST00000215365	protein_coding	principal1	7	1	86583862	6013
ENSMUSG00000090533	processed_pseudogene	Gm8214	ENSMUST00000172123	processed_pseudogene		1	-1	183682131	351
ENSMUSG00000049571	protein_coding	Cfap46	ENSMUST00000156116	retained_intron		7	-1	139683817	3598
ENSMUSG00000059319	protein_coding	Olfr295	ENSMUST00000078447	protein_coding	principal1	7	1	86585277	930
ENSMUSG00000049571	protein_coding	Cfap46	ENSMUST00000130453	protein_coding		7	-1	139683817	774
ENSMUSG00000049571	protein_coding	Cfap46	ENSMUST00000138129	retained_intron		7	-1	139683817	1133
ENSMUSG00000031703	protein_coding	Itfg1	ENSMUST00000034140	protein_coding	principal1	8	-1	85840921	3306
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000162109	nonsense_mediated_decay		17	1	65783416	3254
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000162272	protein_coding		17	1	65783599	664
ENSMUSG00000097194	lincRNA	9330175E14Rik	ENSMUST00000180612	lincRNA		8	-1	94434166	1207
ENSMUSG00000031703	protein_coding	Itfg1	ENSMUST00000210604	retained_intron		8	-1	85727710	3237
ENSMUSG00000044985	protein_coding	Olfr124	ENSMUST00000215168	protein_coding	principal1	17	1	37799888	4497
ENSMUSG00000031703	protein_coding	Itfg1	ENSMUST00000210572	retained_intron		8	-1	85742518	3652
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000162788	processed_transcript		17	1	65800050	380
ENSMUSG00000047641	protein_coding	Krt87	ENSMUST00000081945	protein_coding	principal1	15	-1	101438804	2278
ENSMUSG00000027199	protein_coding	Gatm	ENSMUST00000028624	protein_coding	principal1	2	-1	122611303	2389
ENSMUSG00000031703	protein_coding	Itfg1	ENSMUST00000210133	retained_intron		8	-1	85741527	2741
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000162408	retained_intron		17	1	65802745	715
ENSMUSG00000097194	lincRNA	9330175E14Rik	ENSMUST00000180445	lincRNA		8	-1	94435103	4852
ENSMUSG00000038370	protein_coding	Pcp4l1	ENSMUST00000111332	protein_coding	principal1	1	-1	171196268	1577
ENSMUSG00000044985	protein_coding	Olfr124	ENSMUST00000216478	protein_coding	principal1	17	1	37799991	4416
ENSMUSG00000044985	protein_coding	Olfr124	ENSMUST00000217365	protein_coding	principal1	17	1	37801179	4365
ENSMUSG00000006403	protein_coding	Adamts4	ENSMUST00000111315	protein_coding	alternative2	1	1	171250421	4389
ENSMUSG00000027199	protein_coding	Gatm	ENSMUST00000154598	processed_transcript		2	-1	122598534	510
ENSMUSG00000006403	protein_coding	Adamts4	ENSMUST00000111314	protein_coding	alternative2	1	1	171252116	3761
ENSMUSG00000044985	protein_coding	Olfr124	ENSMUST00000053599	protein_coding	principal1	17	1	37805069	1122
ENSMUSG00000027199	protein_coding	Gatm	ENSMUST00000140808	retained_intron		2	-1	122598812	797
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000161100	processed_transcript		17	1	65817000	762
ENSMUSG00000074151	protein_coding	Nlrc5	ENSMUST00000212382	processed_transcript		8	1	94434356	346
ENSMUSG00000102370	TEC	Gm37973	ENSMUST00000195767	TEC		3	-1	79611826	1289
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000097293	processed_transcript		17	1	65820145	2753
ENSMUSG00000116805	lincRNA	Gm49723	ENSMUST00000231501	lincRNA		16	1	92861877	411
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000159646	nonsense_mediated_decay		17	1	65824533	832
ENSMUSG00000056617	protein_coding	4931429L15Rik	ENSMUST00000159565	protein_coding	principal1	9	-1	46319986	2037
ENSMUSG00000006403	protein_coding	Adamts4	ENSMUST00000219033	protein_coding	principal2	1	1	171250423	4386
ENSMUSG00000000339	protein_coding	Rtca	ENSMUST00000000348	protein_coding	principal1	3	-1	116508208	1594
ENSMUSG00000086586	antisense	Gm11192	ENSMUST00000127017	antisense		11	-1	78279066	151
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000182940	retained_intron		17	1	65828948	818
ENSMUSG00000061950	protein_coding	Ppp4r1	ENSMUST00000162703	protein_coding		17	1	65837890	299
ENSMUSG00000056617	protein_coding	4931429L15Rik	ENSMUST00000160795	protein_coding		9	-1	46315942	290
ENSMUSG00000037049	protein_coding	Smpd1	ENSMUST00000046983	protein_coding	principal1	7	1	105554360	2412
ENSMUSG00000056617	protein_coding	4931429L15Rik	ENSMUST00000172280	protein_coding	principal1	9	-1	46311587	1140
ENSMUSG00000113656	TEC	Gm47370	ENSMUST00000221455	TEC		12	1	98642225	1829
ENSMUSG00000010277	protein_coding	2610507B11Rik	ENSMUST00000125459	processed_transcript		11	1	78261752	895
ENSMUSG00000112990	TEC	Gm47372	ENSMUST00000221845	TEC		12	-1	98652481	3544
ENSMUSG00000000339	protein_coding	Rtca	ENSMUST00000124486	retained_intron		3	-1	116495965	629
ENSMUSG00000037049	protein_coding	Smpd1	ENSMUST00000210934	retained_intron		7	1	105554426	2359
ENSMUSG00000080777	processed_pseudogene	Gm15365	ENSMUST00000122392	processed_pseudogene		X	-1	74713801	300
ENSMUSG00000037049	protein_coding	Smpd1	ENSMUST00000211307	retained_intron		7	1	105555691	540
ENSMUSG00000028339	protein_coding	Col15a1	ENSMUST00000082303	protein_coding	alternative2	4	1	47208161	5102
ENSMUSG00000084066	unprocessed_pseudogene	Xlr4d-ps	ENSMUST00000118894	unprocessed_pseudogene		X	1	74727229	646
ENSMUSG00000097463	processed_transcript	4930448E22Rik	ENSMUST00000181712	lincRNA		9	-1	46329413	1581
ENSMUSG00000028133	protein_coding	Rwdd3	ENSMUST00000106466	protein_coding	principal2	3	-1	121171695	1484
ENSMUSG00000097463	processed_transcript	4930448E22Rik	ENSMUST00000215242	lincRNA		9	-1	46329527	2102
ENSMUSG00000063971	protein_coding	Krt88	ENSMUST00000023781	protein_coding	principal1	15	1	101447744	902
ENSMUSG00000027435	protein_coding	Cd93	ENSMUST00000099269	protein_coding	principal1	2	-1	148443563	6677
ENSMUSG00000097463	processed_transcript	4930448E22Rik	ENSMUST00000217385	retained_intron		9	-1	46328902	1782
ENSMUSG00000074870	protein_coding	Cts3	ENSMUST00000223815	protein_coding	principal1	13	-1	61570127	1367
ENSMUSG00000097463	processed_transcript	4930448E22Rik	ENSMUST00000215349	lincRNA		9	-1	46328847	299
ENSMUSG00000022400	protein_coding	Rbx1	ENSMUST00000023036	protein_coding	principal1	15	1	81466296	1675
ENSMUSG00000079532	protein_coding	Ctag2l2	ENSMUST00000114117	protein_coding	principal1	X	1	74740927	776
ENSMUSG00000000339	protein_coding	Rtca	ENSMUST00000140677	nonsense_mediated_decay		3	-1	116508024	876
ENSMUSG00000028133	protein_coding	Rwdd3	ENSMUST00000164968	retained_intron		3	-1	121156820	1323
ENSMUSG00000111781	unprocessed_pseudogene	AC073947.1	ENSMUST00000215576	unprocessed_pseudogene		9	-1	39095161	766
ENSMUSG00000111126	antisense	Gm39329	ENSMUST00000215849	antisense		9	1	46319038	798
ENSMUSG00000074870	protein_coding	Cts3	ENSMUST00000054702	protein_coding	principal1	13	-1	61570127	1442
ENSMUSG00000110897	processed_pseudogene	Gm47085	ENSMUST00000216991	processed_pseudogene		9	1	39096967	649
ENSMUSG00000028133	protein_coding	Rwdd3	ENSMUST00000164573	protein_coding		3	-1	121158819	473
ENSMUSG00000013593	protein_coding	Ndufs2	ENSMUST00000138069	retained_intron		1	-1	171235540	503
ENSMUSG00000000339	protein_coding	Rtca	ENSMUST00000153005	protein_coding		3	-1	116508065	712
ENSMUSG00000028339	protein_coding	Col15a1	ENSMUST00000102917	protein_coding	principal2	4	1	47208161	5172
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000160405	protein_coding	alternative2	16	-1	8792308	4745
ENSMUSG00000103305	lincRNA	Gm34068	ENSMUST00000193310	lincRNA		1	1	183748977	632
ENSMUSG00000074870	protein_coding	Cts3	ENSMUST00000225515	retained_intron		13	-1	61566688	763
ENSMUSG00000028133	protein_coding	Rwdd3	ENSMUST00000170781	protein_coding	alternative1	3	-1	121171688	1111
ENSMUSG00000087678	lincRNA	Gm14120	ENSMUST00000129067	lincRNA		2	1	148468890	2869
ENSMUSG00000000339	protein_coding	Rtca	ENSMUST00000143425	nonsense_mediated_decay		3	-1	116508133	737
ENSMUSG00000074870	protein_coding	Cts3	ENSMUST00000224855	nonsense_mediated_decay		13	-1	61570059	838
ENSMUSG00000022400	protein_coding	Rbx1	ENSMUST00000230219	protein_coding		15	1	81466344	555
ENSMUSG00000104007	processed_pseudogene	Gm38332	ENSMUST00000194189	processed_pseudogene		1	1	183918130	147
ENSMUSG00000111018	unprocessed_pseudogene	Olfr941-ps1	ENSMUST00000215258	unprocessed_pseudogene		9	-1	39104983	935
ENSMUSG00000028339	protein_coding	Col15a1	ENSMUST00000124105	processed_transcript		4	1	47233267	364
ENSMUSG00000074870	protein_coding	Cts3	ENSMUST00000224967	retained_intron		13	-1	61570116	834
ENSMUSG00000102743	lincRNA	Gm38108	ENSMUST00000193891	lincRNA		1	1	183928405	399
ENSMUSG00000050613	protein_coding	Olfr125	ENSMUST00000213857	protein_coding	principal1	17	1	37832949	3835
ENSMUSG00000022400	protein_coding	Rbx1	ENSMUST00000230062	protein_coding		15	1	81466641	651
ENSMUSG00000028339	protein_coding	Col15a1	ENSMUST00000148103	processed_transcript		4	1	47258535	345
ENSMUSG00000074870	protein_coding	Cts3	ENSMUST00000224050	retained_intron		13	-1	61570096	668
ENSMUSG00000028133	protein_coding	Rwdd3	ENSMUST00000039761	protein_coding	principal2	3	-1	121171694	1145
ENSMUSG00000074796	protein_coding	Slc4a11	ENSMUST00000099362	protein_coding	principal1	2	-1	130697519	3196
ENSMUSG00000022400	protein_coding	Rbx1	ENSMUST00000231027	processed_transcript		15	1	81466795	218
ENSMUSG00000050613	protein_coding	Olfr125	ENSMUST00000050255	protein_coding	principal1	17	1	37834911	1118
ENSMUSG00000028339	protein_coding	Col15a1	ENSMUST00000140094	processed_transcript		4	1	47258856	404
ENSMUSG00000022400	protein_coding	Rbx1	ENSMUST00000229880	retained_intron		15	1	81466817	2669
ENSMUSG00000028339	protein_coding	Col15a1	ENSMUST00000140413	protein_coding		4	1	47288057	405
ENSMUSG00000026497	protein_coding	Mixl1	ENSMUST00000027778	protein_coding	principal1	1	-1	180697034	2294
ENSMUSG00000028339	protein_coding	Col15a1	ENSMUST00000107731	protein_coding		4	1	47288069	3253
ENSMUSG00000022400	protein_coding	Rbx1	ENSMUST00000229991	retained_intron		15	1	81473622	794
ENSMUSG00000081003	unprocessed_pseudogene	Gm14301	ENSMUST00000120181	unprocessed_pseudogene		2	1	176742172	324
ENSMUSG00000028339	protein_coding	Col15a1	ENSMUST00000146967	protein_coding		4	1	47288287	705
ENSMUSG00000081599	unprocessed_pseudogene	Gm14390	ENSMUST00000117505	unprocessed_pseudogene		2	-1	176757439	1695
ENSMUSG00000028133	protein_coding	Rwdd3	ENSMUST00000106467	protein_coding		3	-1	121171694	1158
ENSMUSG00000104202	processed_pseudogene	Gm8101	ENSMUST00000192796	processed_pseudogene		1	1	180721614	478
ENSMUSG00000049708	protein_coding	Olfr27	ENSMUST00000216405	protein_coding	principal1	9	1	39128131	1125
ENSMUSG00000028339	protein_coding	Col15a1	ENSMUST00000107730	protein_coding		4	1	47303722	1755
ENSMUSG00000082288	processed_pseudogene	Gm14755	ENSMUST00000118037	processed_pseudogene		X	-1	74758922	384
ENSMUSG00000087500	antisense	Gm12426	ENSMUST00000153083	antisense		4	-1	47208459	371
ENSMUSG00000082427	unprocessed_pseudogene	Olfr1327-ps1	ENSMUST00000117953	unprocessed_pseudogene		X	-1	74762879	835
ENSMUSG00000013593	protein_coding	Ndufs2	ENSMUST00000150108	processed_transcript		1	-1	171237528	662
ENSMUSG00000082910	unprocessed_pseudogene	Gm14758	ENSMUST00000119104	unprocessed_pseudogene		X	-1	74775822	138
ENSMUSG00000078877	protein_coding	Gm14295	ENSMUST00000118012	protein_coding		2	1	176798612	1213
ENSMUSG00000074796	protein_coding	Slc4a11	ENSMUST00000134647	retained_intron		2	-1	130697469	2832
ENSMUSG00000052560	protein_coding	Cpne8	ENSMUST00000088649	nonsense_mediated_decay		15	-1	90679371	3229
ENSMUSG00000081814	unprocessed_pseudogene	Gm14695	ENSMUST00000121721	unprocessed_pseudogene		X	1	74783672	282
ENSMUSG00000028133	protein_coding	Rwdd3	ENSMUST00000164925	protein_coding		3	-1	121171695	940
ENSMUSG00000049708	protein_coding	Olfr27	ENSMUST00000214052	protein_coding	principal1	9	1	39128132	1076
ENSMUSG00000040289	protein_coding	Hey1	ENSMUST00000042412	protein_coding	principal1	3	-1	8667256	2423
ENSMUSG00000078877	protein_coding	Gm14295	ENSMUST00000132883	protein_coding	principal1	2	1	176802233	2505
ENSMUSG00000082170	processed_pseudogene	Gm8617	ENSMUST00000118796	processed_pseudogene		X	-1	74792158	2222
ENSMUSG00000078877	protein_coding	Gm14295	ENSMUST00000179435	protein_coding		2	1	176807362	192
ENSMUSG00000028133	protein_coding	Rwdd3	ENSMUST00000106465	retained_intron		3	-1	121171695	1583
ENSMUSG00000078876	protein_coding	Gm14408	ENSMUST00000122218	protein_coding		2	1	176831140	408
ENSMUSG00000078876	protein_coding	Gm14408	ENSMUST00000126726	protein_coding	principal1	2	1	176831140	279
ENSMUSG00000074796	protein_coding	Slc4a11	ENSMUST00000144945	retained_intron		2	-1	130688565	2861
ENSMUSG00000021241	protein_coding	Isca2	ENSMUST00000021667	protein_coding	principal1	12	1	84773251	883
ENSMUSG00000028068	protein_coding	Iqgap3	ENSMUST00000071812	protein_coding	principal1	3	1	88081971	5756
ENSMUSG00000074796	protein_coding	Slc4a11	ENSMUST00000138028	retained_intron		2	-1	130691982	640
ENSMUSG00000069385	protein_coding	Gm10267	ENSMUST00000181652	protein_coding	principal2	18	-1	44159885	353
ENSMUSG00000074796	protein_coding	Slc4a11	ENSMUST00000127397	protein_coding		2	-1	130697469	621
ENSMUSG00000040289	protein_coding	Hey1	ENSMUST00000192550	retained_intron		3	-1	8666984	1056
ENSMUSG00000021241	protein_coding	Isca2	ENSMUST00000222166	retained_intron		12	1	84773277	1588
ENSMUSG00000040289	protein_coding	Hey1	ENSMUST00000192102	retained_intron		3	-1	8666625	705
ENSMUSG00000021241	protein_coding	Isca2	ENSMUST00000222136	retained_intron		12	1	84773278	416
ENSMUSG00000069385	protein_coding	Gm10267	ENSMUST00000091916	protein_coding	alternative2	18	-1	44159303	258
ENSMUSG00000040289	protein_coding	Hey1	ENSMUST00000194299	retained_intron		3	-1	8666964	828
ENSMUSG00000028068	protein_coding	Iqgap3	ENSMUST00000193940	retained_intron		3	1	88082020	1564
ENSMUSG00000005883	protein_coding	Spo11	ENSMUST00000050442	protein_coding	principal3	2	1	172979849	1709
ENSMUSG00000028133	protein_coding	Rwdd3	ENSMUST00000098650	retained_intron		3	-1	121171694	2260
ENSMUSG00000114533	processed_pseudogene	Gm8416	ENSMUST00000224382	processed_pseudogene		14	1	8408917	1279
ENSMUSG00000021241	protein_coding	Isca2	ENSMUST00000222449	protein_coding		12	1	84773278	374
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000160326	nonsense_mediated_decay		16	-1	8738420	4488
ENSMUSG00000103814	processed_pseudogene	Gm38007	ENSMUST00000192187	processed_pseudogene		3	1	8673410	313
ENSMUSG00000091649	protein_coding	Phf11b	ENSMUST00000166121	protein_coding	principal1	14	-1	59341351	1184
ENSMUSG00000021241	protein_coding	Isca2	ENSMUST00000223089	retained_intron		12	1	84773291	843
ENSMUSG00000104622	TEC	Gm42541	ENSMUST00000199871	TEC		3	1	154139097	2249
ENSMUSG00000028068	protein_coding	Iqgap3	ENSMUST00000195465	nonsense_mediated_decay		3	1	88082028	3511
ENSMUSG00000021241	protein_coding	Isca2	ENSMUST00000222982	protein_coding		12	1	84773305	727
ENSMUSG00000103346	lincRNA	C230057A21Rik	ENSMUST00000194944	lincRNA		3	-1	8736200	3331
ENSMUSG00000098042	processed_pseudogene	Gm5710	ENSMUST00000183020	processed_pseudogene		3	-1	121181097	995
ENSMUSG00000085301	lincRNA	Gm12132	ENSMUST00000130945	lincRNA		11	1	40008194	1391
ENSMUSG00000028068	protein_coding	Iqgap3	ENSMUST00000193861	retained_intron		3	1	88086150	425
ENSMUSG00000103346	lincRNA	C230057A21Rik	ENSMUST00000195781	lincRNA		3	-1	8736360	600
ENSMUSG00000021241	protein_coding	Isca2	ENSMUST00000222818	retained_intron		12	1	84773307	749
ENSMUSG00000103633	processed_pseudogene	Gm38328	ENSMUST00000195582	processed_pseudogene		1	1	177269352	317
ENSMUSG00000021241	protein_coding	Isca2	ENSMUST00000222022	protein_coding		12	1	84773325	485
ENSMUSG00000021241	protein_coding	Isca2	ENSMUST00000220726	retained_intron		12	1	84773697	758
ENSMUSG00000028068	protein_coding	Iqgap3	ENSMUST00000194440	protein_coding		3	1	88105142	3263
ENSMUSG00000103256	TEC	Gm37647	ENSMUST00000194556	TEC		3	-1	8746824	3143
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000161046	protein_coding	principal2	16	-1	8738342	4003
ENSMUSG00000027809	protein_coding	Etfdh	ENSMUST00000029386	protein_coding	principal1	3	-1	79628863	2377
ENSMUSG00000028068	protein_coding	Iqgap3	ENSMUST00000194772	retained_intron		3	1	88107116	4512
ENSMUSG00000036992	protein_coding	Nxt1	ENSMUST00000047177	protein_coding	principal1	2	1	148672626	956
ENSMUSG00000107605	lincRNA	Gm44117	ENSMUST00000204442	lincRNA		6	-1	90461468	1758
ENSMUSG00000005883	protein_coding	Spo11	ENSMUST00000109126	protein_coding		2	1	172979849	1625
ENSMUSG00000110429	processed_pseudogene	Gm2059	ENSMUST00000212025	processed_pseudogene		8	1	75079141	287
ENSMUSG00000036992	protein_coding	Nxt1	ENSMUST00000109961	protein_coding	principal1	2	1	148672601	1116
ENSMUSG00000026499	protein_coding	Acbd3	ENSMUST00000027780	protein_coding	principal1	1	1	180726043	3471
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000195002	protein_coding		1	1	177442351	394
ENSMUSG00000005883	protein_coding	Spo11	ENSMUST00000109125	protein_coding	alternative1	2	1	172979842	1591
ENSMUSG00000092269	processed_pseudogene	Gm9577	ENSMUST00000174655	processed_pseudogene		17	-1	37842929	2620
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000162445	processed_transcript		16	-1	8721656	3447
ENSMUSG00000044854	protein_coding	1700056E22Rik	ENSMUST00000193919	antisense		1	-1	184034301	1272
ENSMUSG00000101031	protein_coding	Ms4a12	ENSMUST00000186228	protein_coding	principal1	19	-1	11232448	1808
ENSMUSG00000027809	protein_coding	Etfdh	ENSMUST00000120992	protein_coding		3	-1	79628697	2233
ENSMUSG00000044854	protein_coding	1700056E22Rik	ENSMUST00000050306	protein_coding	principal1	1	-1	184033998	967
ENSMUSG00000026499	protein_coding	Acbd3	ENSMUST00000192420	retained_intron		1	1	180729857	3569
ENSMUSG00000097091	antisense	4930526L06Rik	ENSMUST00000181137	antisense		19	1	11196817	1022
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000162929	retained_intron		16	-1	8698830	1572
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000195549	protein_coding		1	1	177442466	646
ENSMUSG00000027010	protein_coding	Slc25a12	ENSMUST00000151937	protein_coding	principal1	2	-1	71367749	6351
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000159387	retained_intron		16	-1	8697581	823
ENSMUSG00000103649	antisense	Gm37768	ENSMUST00000192748	antisense		1	-1	180755836	887
ENSMUSG00000039384	protein_coding	Dusp10	ENSMUST00000139839	protein_coding		1	1	184013302	724
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000194319	protein_coding		1	1	177442544	335
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000173939	retained_intron		16	-1	8698532	600
ENSMUSG00000086081	processed_pseudogene	Spin2-ps3	ENSMUST00000148147	processed_pseudogene		X	1	74804799	762
ENSMUSG00000027809	protein_coding	Etfdh	ENSMUST00000135058	retained_intron		3	-1	79628683	945
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000192699	protein_coding		1	1	177443216	218
ENSMUSG00000039824	protein_coding	Myl6b	ENSMUST00000026428	protein_coding	principal1	10	-1	128498685	1026
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000172505	nonsense_mediated_decay		16	-1	8706729	1225
ENSMUSG00000027809	protein_coding	Etfdh	ENSMUST00000153039	retained_intron		3	-1	79628863	1834
ENSMUSG00000005883	protein_coding	Spo11	ENSMUST00000144044	retained_intron		2	1	172977700	3619
ENSMUSG00000027809	protein_coding	Etfdh	ENSMUST00000149511	retained_intron		3	-1	79628718	3740
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000159281	retained_intron		16	-1	8703781	474
ENSMUSG00000081612	unprocessed_pseudogene	Xlr5e-ps	ENSMUST00000122043	unprocessed_pseudogene		X	-1	74830149	711
ENSMUSG00000058806	protein_coding	Col13a1	ENSMUST00000105453	protein_coding		10	-1	61979073	2935
ENSMUSG00000027809	protein_coding	Etfdh	ENSMUST00000194620	retained_intron		3	-1	79629500	1252
ENSMUSG00000039824	protein_coding	Myl6b	ENSMUST00000218250	retained_intron		10	-1	128495556	1243
ENSMUSG00000020257	protein_coding	Wdr82	ENSMUST00000020490	protein_coding	principal1	9	1	106170928	3747
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000159287	retained_intron		16	-1	8706927	637
ENSMUSG00000027809	protein_coding	Etfdh	ENSMUST00000126809	processed_transcript		3	-1	79628739	357
ENSMUSG00000005883	protein_coding	Spo11	ENSMUST00000156471	processed_transcript		2	1	172985877	484
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000162141	retained_intron		16	-1	8705309	280
ENSMUSG00000027010	protein_coding	Slc25a12	ENSMUST00000184169	nonsense_mediated_decay		2	-1	71367533	2392
ENSMUSG00000020257	protein_coding	Wdr82	ENSMUST00000191147	retained_intron		9	1	106170929	3045
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000159503	retained_intron		16	-1	8706219	280
ENSMUSG00000062226	processed_pseudogene	Gm10112	ENSMUST00000075226	processed_pseudogene		X	1	111168341	349
ENSMUSG00000027010	protein_coding	Slc25a12	ENSMUST00000147553	processed_transcript		2	-1	71294645	994
ENSMUSG00000058806	protein_coding	Col13a1	ENSMUST00000105452	protein_coding	alternative2	10	-1	61979073	3037
ENSMUSG00000022710	protein_coding	Usp7	ENSMUST00000159509	retained_intron		16	-1	8706828	411
ENSMUSG00000057280	protein_coding	Musk	ENSMUST00000102893	protein_coding	alternative2	4	1	58285962	3323
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000094276	protein_coding	alternative1	1	1	177444295	4204
ENSMUSG00000027010	protein_coding	Slc25a12	ENSMUST00000130715	retained_intron		2	-1	71282789	414
ENSMUSG00000023050	protein_coding	Map3k12	ENSMUST00000023812	protein_coding	principal1	15	-1	102516836	5185
ENSMUSG00000118626	processed_pseudogene	AC127285.1	ENSMUST00000239289	processed_pseudogene		8	1	88109786	1187
ENSMUSG00000079531	protein_coding	Gm5936	ENSMUST00000114116	protein_coding	principal1	X	1	74837196	2857
ENSMUSG00000020257	protein_coding	Wdr82	ENSMUST00000216761	nonsense_mediated_decay		9	1	106171210	487
ENSMUSG00000027811	protein_coding	4930579G24Rik	ENSMUST00000029388	protein_coding	principal1	3	1	79629079	1970
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000192851	protein_coding		1	1	177444649	857
ENSMUSG00000082578	processed_pseudogene	Gm13527	ENSMUST00000117926	processed_pseudogene		2	1	57079748	691
ENSMUSG00000080822	unprocessed_pseudogene	Gm14694	ENSMUST00000121856	unprocessed_pseudogene		X	-1	74849438	282
ENSMUSG00000027010	protein_coding	Slc25a12	ENSMUST00000137916	processed_transcript		2	-1	71328840	790
ENSMUSG00000033597	protein_coding	Caskin1	ENSMUST00000234171	retained_intron		17	1	24488601	2074
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000193480	protein_coding		1	1	177444653	3734
ENSMUSG00000039384	protein_coding	Dusp10	ENSMUST00000048655	protein_coding	principal1	1	1	184034381	2792
ENSMUSG00000027010	protein_coding	Slc25a12	ENSMUST00000126493	processed_transcript		2	-1	71344032	550
ENSMUSG00000081832	unprocessed_pseudogene	Gm6897	ENSMUST00000117714	unprocessed_pseudogene		X	1	74860878	138
ENSMUSG00000027010	protein_coding	Slc25a12	ENSMUST00000146653	processed_transcript		2	-1	71347828	204
ENSMUSG00000020257	protein_coding	Wdr82	ENSMUST00000214444	nonsense_mediated_decay		9	1	106171210	609
ENSMUSG00000058806	protein_coding	Col13a1	ENSMUST00000105454	protein_coding	principal2	10	-1	61979108	3162
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000195388	protein_coding		1	1	177444661	525
ENSMUSG00000082190	processed_pseudogene	Gm13641	ENSMUST00000117993	processed_pseudogene		2	1	71319783	473
ENSMUSG00000110864	lincRNA	Gm31374	ENSMUST00000213885	lincRNA		9	1	46337931	619
ENSMUSG00000030087	protein_coding	Klf15	ENSMUST00000032174	protein_coding	principal1	6	1	90462576	2373
ENSMUSG00000094409	processed_pseudogene	Vmn2r-ps23	ENSMUST00000178719	processed_pseudogene		5	-1	109578589	571
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000193440	protein_coding		1	1	177444737	549
ENSMUSG00000110864	lincRNA	Gm31374	ENSMUST00000214913	lincRNA		9	1	46342775	914
ENSMUSG00000080193	processed_pseudogene	Gm14756	ENSMUST00000116395	processed_pseudogene		X	-1	74872435	240
ENSMUSG00000020257	protein_coding	Wdr82	ENSMUST00000217532	nonsense_mediated_decay		9	1	106171377	594
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000195612	protein_coding	principal3	1	1	177444938	3790
ENSMUSG00000110802	lincRNA	Gm47141	ENSMUST00000217145	lincRNA		9	1	46397362	373
ENSMUSG00000030087	protein_coding	Klf15	ENSMUST00000203039	protein_coding	principal1	6	1	90462674	2482
ENSMUSG00000110802	lincRNA	Gm47141	ENSMUST00000213920	lincRNA		9	1	46397365	999
ENSMUSG00000057280	protein_coding	Musk	ENSMUST00000084578	protein_coding	principal4	4	1	58285962	3347
ENSMUSG00000020257	protein_coding	Wdr82	ENSMUST00000190564	nonsense_mediated_decay		9	1	106176677	577
ENSMUSG00000085877	processed_pseudogene	Spin2-ps4	ENSMUST00000126395	processed_pseudogene		X	-1	74890424	762
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000194269	processed_transcript		1	1	177445631	100
ENSMUSG00000030087	protein_coding	Klf15	ENSMUST00000113530	protein_coding	principal1	6	1	90465304	2374
ENSMUSG00000021611	protein_coding	Tert	ENSMUST00000223196	retained_intron		13	1	73626911	2663
ENSMUSG00000103156	lincRNA	Gm38293	ENSMUST00000193209	lincRNA		1	-1	180768656	600
ENSMUSG00000063659	protein_coding	Zbtb18	ENSMUST00000077225	protein_coding	principal3	1	1	177445821	4944
ENSMUSG00000030087	protein_coding	Klf15	ENSMUST00000203607	protein_coding	principal1	6	1	90466400	2240
ENSMUSG00000111115	lincRNA	Gm47144	ENSMUST00000214085	lincRNA		9	-1	46505073	721
ENSMUSG00000057280	protein_coding	Musk	ENSMUST00000135879	processed_transcript		4	1	58286175	903
ENSMUSG00000097892	antisense	Gm26801	ENSMUST00000193187	antisense		1	-1	177429084	610
ENSMUSG00000030087	protein_coding	Klf15	ENSMUST00000205136	protein_coding		6	1	90467118	1545
ENSMUSG00000097892	antisense	Gm26801	ENSMUST00000180591	antisense		1	-1	177443270	1219
ENSMUSG00000024673	protein_coding	Ms4a1	ENSMUST00000169159	protein_coding	principal1	19	-1	11266241	3075
ENSMUSG00000058806	protein_coding	Col13a1	ENSMUST00000051826	retained_intron		10	-1	61978121	2407
ENSMUSG00000052560	protein_coding	Cpne8	ENSMUST00000064391	protein_coding	principal1	15	-1	90679432	3366
ENSMUSG00000058806	protein_coding	Col13a1	ENSMUST00000153120	retained_intron		10	-1	61851525	819
ENSMUSG00000040163	protein_coding	1700034J05Rik	ENSMUST00000036592	protein_coding	principal4	6	-1	146954422	3007
ENSMUSG00000112574	processed_pseudogene	Gm5750	ENSMUST00000218711	processed_pseudogene		10	1	61959624	801
ENSMUSG00000024673	protein_coding	Ms4a1	ENSMUST00000185851	retained_intron		19	-1	11254684	2570
ENSMUSG00000057280	protein_coding	Musk	ENSMUST00000098057	protein_coding		4	1	58285962	3422
ENSMUSG00000040481	protein_coding	Bptf	ENSMUST00000106763	protein_coding	alternative2	11	-1	107132127	12036
ENSMUSG00000040481	protein_coding	Bptf	ENSMUST00000106762	protein_coding	alternative2	11	-1	107132127	11847
ENSMUSG00000024673	protein_coding	Ms4a1	ENSMUST00000187379	retained_intron		19	-1	11266145	3014
ENSMUSG00000111345	TEC	Gm48562	ENSMUST00000217425	TEC		9	-1	44753851	748
ENSMUSG00000040163	protein_coding	1700034J05Rik	ENSMUST00000111622	protein_coding	alternative2	6	-1	146954414	2023
ENSMUSG00000040481	protein_coding	Bptf	ENSMUST00000208369	protein_coding		11	-1	107047343	2177
ENSMUSG00000097835	bidirectional_promoter_lncRNA	Gm26910	ENSMUST00000180450	bidirectional_promoter_lncRNA		18	-1	67774857	698
ENSMUSG00000052560	protein_coding	Cpne8	ENSMUST00000014777	protein_coding		15	-1	90679388	697
ENSMUSG00000005413	protein_coding	Hmox1	ENSMUST00000005548	protein_coding	principal1	8	1	75093621	1569
ENSMUSG00000023050	protein_coding	Map3k12	ENSMUST00000171565	protein_coding	principal1	15	-1	102510700	4318
ENSMUSG00000040481	protein_coding	Bptf	ENSMUST00000147816	processed_transcript		11	-1	107043706	1433
ENSMUSG00000118134	antisense	4930549G23Rik	ENSMUST00000237403	antisense		18	-1	67799971	585
ENSMUSG00000005413	protein_coding	Hmox1	ENSMUST00000159631	retained_intron		8	1	75096844	774
ENSMUSG00000000787	protein_coding	Ddx3x	ENSMUST00000000804	protein_coding	principal1	X	1	13280970	4692
ENSMUSG00000067615	protein_coding	Krt81	ENSMUST00000061185	protein_coding	principal1	15	-1	101463751	1843
ENSMUSG00000040481	protein_coding	Bptf	ENSMUST00000138443	processed_transcript		11	-1	107047275	1061
ENSMUSG00000118134	antisense	4930549G23Rik	ENSMUST00000237968	antisense		18	-1	67799943	580
ENSMUSG00000052560	protein_coding	Cpne8	ENSMUST00000140171	processed_transcript		15	-1	90649438	537
ENSMUSG00000054523	protein_coding	Ms4a5	ENSMUST00000191110	retained_intron		19	-1	11279443	942
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000172694	protein_coding		3	-1	30013156	4381
ENSMUSG00000040481	protein_coding	Bptf	ENSMUST00000133317	protein_coding		11	-1	107052890	780
ENSMUSG00000057280	protein_coding	Musk	ENSMUST00000177951	protein_coding	alternative2	4	1	58285962	3352
ENSMUSG00000029547	protein_coding	Ints1	ENSMUST00000072607	protein_coding	alternative2	5	-1	139775673	7102
ENSMUSG00000052560	protein_coding	Cpne8	ENSMUST00000154569	retained_intron		15	-1	90679376	642
ENSMUSG00000040481	protein_coding	Bptf	ENSMUST00000149486	protein_coding		11	-1	107067205	867
ENSMUSG00000000787	protein_coding	Ddx3x	ENSMUST00000153851	processed_transcript		X	1	13281022	587
ENSMUSG00000042594	protein_coding	Sh2b3	ENSMUST00000136960	nonsense_mediated_decay		5	-1	121836825	4313
ENSMUSG00000078847	processed_pseudogene	Gm6746	ENSMUST00000108774	processed_pseudogene		15	1	90561347	483
ENSMUSG00000023050	protein_coding	Map3k12	ENSMUST00000169377	protein_coding	principal1	15	-1	102517064	4210
ENSMUSG00000067615	protein_coding	Krt81	ENSMUST00000230541	retained_intron		15	-1	101463514	671
ENSMUSG00000040481	protein_coding	Bptf	ENSMUST00000057892	protein_coding	principal2	11	-1	107131922	11488
ENSMUSG00000023050	protein_coding	Map3k12	ENSMUST00000169367	protein_coding		15	-1	102517004	503
ENSMUSG00000000787	protein_coding	Ddx3x	ENSMUST00000153611	retained_intron		X	1	13281032	792
ENSMUSG00000023050	protein_coding	Map3k12	ENSMUST00000165174	protein_coding		15	-1	102516975	517
ENSMUSG00000023050	protein_coding	Map3k12	ENSMUST00000169162	protein_coding		15	-1	102516816	441
ENSMUSG00000074876	processed_transcript	Spata5l1	ENSMUST00000152813	processed_transcript		2	1	122630646	1526
ENSMUSG00000054523	protein_coding	Ms4a5	ENSMUST00000186937	protein_coding		19	-1	11283813	816
ENSMUSG00000023050	protein_coding	Map3k12	ENSMUST00000164343	retained_intron		15	-1	102516812	3373
ENSMUSG00000028360	protein_coding	Slc44a5	ENSMUST00000089948	protein_coding	principal2	3	1	153973436	4098
ENSMUSG00000040188	protein_coding	Scamp2	ENSMUST00000045791	protein_coding	principal1	9	1	57560943	2340
ENSMUSG00000028360	protein_coding	Slc44a5	ENSMUST00000239250	protein_coding	alternative2	3	1	154046923	3853
ENSMUSG00000057280	protein_coding	Musk	ENSMUST00000098059	protein_coding	alternative2	4	1	58285962	3352
ENSMUSG00000000787	protein_coding	Ddx3x	ENSMUST00000123096	retained_intron		X	1	13287284	802
ENSMUSG00000023050	protein_coding	Map3k12	ENSMUST00000167677	retained_intron		15	-1	102510792	563
ENSMUSG00000092310	protein_coding	Gm20509	ENSMUST00000174203	protein_coding	principal1	9	1	73102470	1016
ENSMUSG00000040188	protein_coding	Scamp2	ENSMUST00000216986	protein_coding		9	1	57560958	697
ENSMUSG00000000787	protein_coding	Ddx3x	ENSMUST00000149639	retained_intron		X	1	13287785	1003
ENSMUSG00000054523	protein_coding	Ms4a5	ENSMUST00000067673	protein_coding	principal1	19	-1	11283873	1005
ENSMUSG00000028360	protein_coding	Slc44a5	ENSMUST00000128362	processed_transcript		3	1	154222482	550
ENSMUSG00000040188	protein_coding	Scamp2	ENSMUST00000213662	retained_intron		9	1	57560974	560
ENSMUSG00000092622	protein_coding	Khdc3	ENSMUST00000172578	protein_coding		9	1	73101836	619
ENSMUSG00000057280	protein_coding	Musk	ENSMUST00000081919	protein_coding	alternative2	4	1	58285960	3348
ENSMUSG00000040188	protein_coding	Scamp2	ENSMUST00000215942	protein_coding		9	1	57562907	193
ENSMUSG00000057280	protein_coding	Musk	ENSMUST00000179951	protein_coding	alternative2	4	1	58285962	3376
ENSMUSG00000054523	protein_coding	Ms4a5	ENSMUST00000188335	processed_transcript		19	-1	11279654	549
ENSMUSG00000003934	protein_coding	Efnb3	ENSMUST00000004036	protein_coding	principal1	11	-1	69560205	3183
ENSMUSG00000054523	protein_coding	Ms4a5	ENSMUST00000188267	nonsense_mediated_decay		19	-1	11283860	569
ENSMUSG00000033004	protein_coding	Mycbp2	ENSMUST00000160758	protein_coding		14	-1	103346418	14620
ENSMUSG00000028360	protein_coding	Slc44a5	ENSMUST00000144677	retained_intron		3	1	154257474	5189
ENSMUSG00000106500	TEC	Gm42540	ENSMUST00000200319	TEC		3	-1	154249500	2008
ENSMUSG00000040188	protein_coding	Scamp2	ENSMUST00000217200	processed_transcript		9	1	57581850	331
ENSMUSG00000082295	processed_pseudogene	Gm12133	ENSMUST00000121775	processed_pseudogene		11	-1	40423354	661
ENSMUSG00000027994	protein_coding	Mcub	ENSMUST00000029624	protein_coding	principal1	3	-1	129970206	1318
ENSMUSG00000090114	processed_pseudogene	Gm3076	ENSMUST00000161613	processed_pseudogene		3	1	154132340	451
ENSMUSG00000083170	unprocessed_pseudogene	Gm14405	ENSMUST00000117808	unprocessed_pseudogene		2	-1	176855548	2330
ENSMUSG00000040188	protein_coding	Scamp2	ENSMUST00000216667	retained_intron		9	1	57586718	794
ENSMUSG00000086775	antisense	Snhg7os	ENSMUST00000131841	antisense		2	1	26640372	3947
ENSMUSG00000107451	lincRNA	Gm44421	ENSMUST00000205064	lincRNA		6	1	90478466	1221
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000030367	protein_coding	principal1	4	1	106911470	3195
ENSMUSG00000046652	protein_coding	Tas2r143	ENSMUST00000057398	protein_coding	principal1	6	1	42400238	882
ENSMUSG00000016756	protein_coding	Cmah	ENSMUST00000224953	protein_coding	principal1	13	1	24327404	2221
ENSMUSG00000021611	protein_coding	Tert	ENSMUST00000022104	protein_coding	principal1	13	1	73626916	4313
ENSMUSG00000027994	protein_coding	Mcub	ENSMUST00000153506	protein_coding		3	-1	129970076	1005
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000149926	protein_coding		4	1	106911511	1023
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000212252	protein_coding		1	1	133164210	1156
ENSMUSG00000080749	processed_pseudogene	Gm12134	ENSMUST00000122109	processed_pseudogene		11	1	40429537	520
ENSMUSG00000013593	protein_coding	Ndufs2	ENSMUST00000013737	protein_coding	principal1	1	-1	171247122	1623
ENSMUSG00000027994	protein_coding	Mcub	ENSMUST00000146340	protein_coding		3	-1	129969989	445
ENSMUSG00000027994	protein_coding	Mcub	ENSMUST00000122961	nonsense_mediated_decay		3	-1	129970124	365
ENSMUSG00000033004	protein_coding	Mycbp2	ENSMUST00000239305	nonsense_mediated_decay		14	-1	103346800	15247
ENSMUSG00000086775	antisense	Snhg7os	ENSMUST00000126798	antisense		2	1	26643315	546
ENSMUSG00000056203	protein_coding	Tas2r135	ENSMUST00000070178	protein_coding	principal1	6	1	42405434	1093
ENSMUSG00000074151	protein_coding	Nlrc5	ENSMUST00000211816	protein_coding	principal1	8	1	94434391	7578
ENSMUSG00000086775	antisense	Snhg7os	ENSMUST00000147986	antisense		2	1	26643889	392
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000072753	protein_coding		4	1	106911533	1924
ENSMUSG00000074527	protein_coding	Gm14296	ENSMUST00000134982	nonsense_mediated_decay		2	-1	176927794	5159
ENSMUSG00000074151	protein_coding	Nlrc5	ENSMUST00000212220	processed_transcript		8	1	94434401	557
ENSMUSG00000048284	protein_coding	Tas2r126	ENSMUST00000059534	protein_coding	principal1	6	1	42434535	930
ENSMUSG00000074527	protein_coding	Gm14296	ENSMUST00000135176	retained_intron		2	-1	176919059	1313
ENSMUSG00000025332	protein_coding	Kdm5c	ENSMUST00000112584	protein_coding	alternative2	X	1	152233020	5900
ENSMUSG00000074151	protein_coding	Nlrc5	ENSMUST00000182409	protein_coding		8	1	94470010	4552
ENSMUSG00000074527	protein_coding	Gm14296	ENSMUST00000099007	protein_coding	principal1	2	-1	176927809	3823
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000173495	protein_coding	principal5	3	-1	30509733	5066
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000097934	protein_coding		4	1	106911667	1742
ENSMUSG00000033004	protein_coding	Mycbp2	ENSMUST00000159855	protein_coding	principal1	14	-1	103346800	15233
ENSMUSG00000085588	lincRNA	3110004A20Rik	ENSMUST00000123904	lincRNA		11	-1	40475677	385
ENSMUSG00000029547	protein_coding	Ints1	ENSMUST00000198615	retained_intron		5	-1	139754858	1634
ENSMUSG00000074527	protein_coding	Gm14296	ENSMUST00000125090	processed_transcript		2	-1	176927805	2314
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000132506	processed_transcript		4	1	106911861	1128
ENSMUSG00000074527	protein_coding	Gm14296	ENSMUST00000108931	protein_coding		2	-1	176917518	750
ENSMUSG00000108150	unprocessed_pseudogene	Gm44470	ENSMUST00000203913	unprocessed_pseudogene		6	-1	42443931	142
ENSMUSG00000092622	protein_coding	Khdc3	ENSMUST00000034737	protein_coding	principal3	9	1	73102398	1681
ENSMUSG00000115917	processed_pseudogene	Gm49406	ENSMUST00000231011	processed_pseudogene		15	-1	81486381	410
ENSMUSG00000074151	protein_coding	Nlrc5	ENSMUST00000183132	nonsense_mediated_decay		8	1	94482039	856
ENSMUSG00000033004	protein_coding	Mycbp2	ENSMUST00000162852	processed_transcript		14	-1	103115396	344
ENSMUSG00000067614	protein_coding	Krt86	ENSMUST00000088049	protein_coding	principal1	15	1	101473478	1963
ENSMUSG00000033004	protein_coding	Mycbp2	ENSMUST00000162762	retained_intron		14	-1	103152214	2695
ENSMUSG00000013593	protein_coding	Ndufs2	ENSMUST00000136976	retained_intron		1	-1	171247122	1845
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230129	retained_intron		15	1	102470539	1230
ENSMUSG00000016756	protein_coding	Cmah	ENSMUST00000050859	protein_coding	principal1	13	1	24327420	2444
ENSMUSG00000013593	protein_coding	Ndufs2	ENSMUST00000111318	protein_coding		1	-1	171247122	1545
ENSMUSG00000033004	protein_coding	Mycbp2	ENSMUST00000161278	protein_coding		14	-1	103191615	2613
ENSMUSG00000074151	protein_coding	Nlrc5	ENSMUST00000183287	retained_intron		8	1	94521431	735
ENSMUSG00000016756	protein_coding	Cmah	ENSMUST00000224819	protein_coding		13	1	24327420	9482
ENSMUSG00000033004	protein_coding	Mycbp2	ENSMUST00000226961	protein_coding		14	-1	103275795	15
ENSMUSG00000116011	lincRNA	Gm49501	ENSMUST00000230173	lincRNA		15	1	101480296	2528
ENSMUSG00000029547	protein_coding	Ints1	ENSMUST00000200393	protein_coding	principal2	5	-1	139775638	7070
ENSMUSG00000010277	protein_coding	2610507B11Rik	ENSMUST00000010421	protein_coding	principal1	11	1	78261752	7443
ENSMUSG00000022101	protein_coding	Fgf17	ENSMUST00000022697	protein_coding	principal2	14	-1	70642268	1689
ENSMUSG00000016756	protein_coding	Cmah	ENSMUST00000110391	protein_coding	principal1	13	1	24376083	9789
ENSMUSG00000092622	protein_coding	Khdc3	ENSMUST00000173734	protein_coding	alternative2	9	1	73102398	1228
ENSMUSG00000033004	protein_coding	Mycbp2	ENSMUST00000162537	retained_intron		14	-1	103346814	3495
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000108270	protein_coding	alternative2	3	-1	30013505	5692
ENSMUSG00000026919	protein_coding	Lcn4	ENSMUST00000028283	protein_coding	principal1	2	-1	26671282	774
ENSMUSG00000092622	protein_coding	Khdc3	ENSMUST00000167514	protein_coding	alternative2	9	1	73102510	1251
ENSMUSG00000029547	protein_coding	Ints1	ENSMUST00000197187	protein_coding		5	-1	139754978	563
ENSMUSG00000010277	protein_coding	2610507B11Rik	ENSMUST00000141331	retained_intron		11	1	78262472	462
ENSMUSG00000074151	protein_coding	Nlrc5	ENSMUST00000137032	retained_intron		8	1	94525067	1727
ENSMUSG00000022101	protein_coding	Fgf17	ENSMUST00000227123	protein_coding	alternative2	14	-1	70642254	1336
ENSMUSG00000013593	protein_coding	Ndufs2	ENSMUST00000131286	processed_transcript		1	-1	171240055	746
ENSMUSG00000029547	protein_coding	Ints1	ENSMUST00000197727	retained_intron		5	-1	139762495	716
ENSMUSG00000083311	processed_pseudogene	Gm5643	ENSMUST00000117081	processed_pseudogene		X	1	142297565	966
ENSMUSG00000013593	protein_coding	Ndufs2	ENSMUST00000194778	protein_coding		1	-1	171251251	714
ENSMUSG00000029547	protein_coding	Ints1	ENSMUST00000196319	retained_intron		5	-1	139767898	807
ENSMUSG00000010277	protein_coding	2610507B11Rik	ENSMUST00000136184	retained_intron		11	1	78266133	750
ENSMUSG00000074151	protein_coding	Nlrc5	ENSMUST00000053085	protein_coding	principal1	8	1	94472763	6945
ENSMUSG00000026468	protein_coding	Lhx4	ENSMUST00000027740	protein_coding	principal1	1	-1	155742027	5514
ENSMUSG00000013593	protein_coding	Ndufs2	ENSMUST00000191871	protein_coding		1	-1	171251388	643
ENSMUSG00000029547	protein_coding	Ints1	ENSMUST00000196379	retained_intron		5	-1	139775674	2761
ENSMUSG00000010277	protein_coding	2610507B11Rik	ENSMUST00000132756	retained_intron		11	1	78271971	957
ENSMUSG00000090122	protein_coding	Kcne1l	ENSMUST00000134825	protein_coding	principal1	X	-1	142306294	1543
ENSMUSG00000033170	protein_coding	Card10	ENSMUST00000164826	protein_coding	principal2	15	-1	78803042	4726
ENSMUSG00000111171	antisense	Gm47815	ENSMUST00000213522	antisense		10	1	43034993	1501
ENSMUSG00000038071	protein_coding	Npy6r	ENSMUST00000042747	protein_coding	principal1	18	1	44270127	2567
ENSMUSG00000029547	protein_coding	Ints1	ENSMUST00000200339	retained_intron		5	-1	139768454	810
ENSMUSG00000074151	protein_coding	Nlrc5	ENSMUST00000098489	protein_coding		8	1	94525067	1721
ENSMUSG00000111171	antisense	Gm47815	ENSMUST00000213469	antisense		10	1	43035073	389
ENSMUSG00000029547	protein_coding	Ints1	ENSMUST00000197156	retained_intron		5	-1	139771731	694
ENSMUSG00000026468	protein_coding	Lhx4	ENSMUST00000195275	protein_coding		1	-1	155751684	928
ENSMUSG00000010277	protein_coding	2610507B11Rik	ENSMUST00000145145	nonsense_mediated_decay		11	1	78273151	818
ENSMUSG00000025332	protein_coding	Kdm5c	ENSMUST00000112588	protein_coding	principal2	X	1	152233229	6449
ENSMUSG00000102062	antisense	Gm29246	ENSMUST00000189221	antisense		10	1	43173263	349
ENSMUSG00000033170	protein_coding	Card10	ENSMUST00000170584	protein_coding	alternative2	15	-1	78802669	3220
ENSMUSG00000021611	protein_coding	Tert	ENSMUST00000223303	nonsense_mediated_decay		13	1	73626990	3730
ENSMUSG00000099893	TEC	Gm29245	ENSMUST00000187332	TEC		10	1	43154216	1416
ENSMUSG00000029547	protein_coding	Ints1	ENSMUST00000196864	protein_coding		5	-1	139775674	621
ENSMUSG00000016756	protein_coding	Cmah	ENSMUST00000131691	processed_transcript		13	1	24395287	936
ENSMUSG00000021611	protein_coding	Tert	ENSMUST00000221522	nonsense_mediated_decay		13	1	73627011	2708
ENSMUSG00000010277	protein_coding	2610507B11Rik	ENSMUST00000126928	retained_intron		11	1	78285411	736
ENSMUSG00000033170	protein_coding	Card10	ENSMUST00000071115	processed_transcript		15	-1	78790515	529
ENSMUSG00000021007	protein_coding	Spata7	ENSMUST00000048402	protein_coding	principal1	12	1	98628157	2052
ENSMUSG00000042594	protein_coding	Sh2b3	ENSMUST00000086310	protein_coding	principal3	5	-1	121836859	4195
ENSMUSG00000021611	protein_coding	Tert	ENSMUST00000222251	nonsense_mediated_decay		13	1	73636515	569
ENSMUSG00000010277	protein_coding	2610507B11Rik	ENSMUST00000147432	retained_intron		11	1	78287940	786
ENSMUSG00000021611	protein_coding	Tert	ENSMUST00000222912	retained_intron		13	1	73640013	639
ENSMUSG00000042594	protein_coding	Sh2b3	ENSMUST00000198161	protein_coding		5	-1	121828741	391
ENSMUSG00000025332	protein_coding	Kdm5c	ENSMUST00000154938	retained_intron		X	1	152233254	1872
ENSMUSG00000081940	unprocessed_pseudogene	Xlr3e-ps	ENSMUST00000119644	unprocessed_pseudogene		X	1	74912417	682
ENSMUSG00000083691	processed_pseudogene	Gm14465	ENSMUST00000120603	processed_pseudogene		2	-1	79161595	567
ENSMUSG00000016756	protein_coding	Cmah	ENSMUST00000224657	protein_coding	principal1	13	1	24415122	3124
ENSMUSG00000117269	processed_pseudogene	Gm9706	ENSMUST00000233090	processed_pseudogene		17	-1	46407484	481
ENSMUSG00000021611	protein_coding	Tert	ENSMUST00000223325	retained_intron		13	1	73648185	550
ENSMUSG00000033047	protein_coding	Eif3l	ENSMUST00000040518	protein_coding	principal1	15	1	79075179	1942
ENSMUSG00000025332	protein_coding	Kdm5c	ENSMUST00000082177	protein_coding	alternative2	X	1	152233272	5520
ENSMUSG00000021007	protein_coding	Spata7	ENSMUST00000155899	retained_intron		12	1	98628162	1681
ENSMUSG00000025332	protein_coding	Kdm5c	ENSMUST00000156114	protein_coding		X	1	152269806	773
ENSMUSG00000053729	protein_coding	Spinkl	ENSMUST00000066328	protein_coding	principal1	18	-1	44175074	596
ENSMUSG00000087171	lincRNA	Gm12962	ENSMUST00000144212	lincRNA		4	-1	131672141	691
ENSMUSG00000021007	protein_coding	Spata7	ENSMUST00000222195	retained_intron		12	1	98628167	2193
ENSMUSG00000042594	protein_coding	Sh2b3	ENSMUST00000122426	protein_coding	principal3	5	-1	121836104	2777
ENSMUSG00000032215	protein_coding	Rsl24d1	ENSMUST00000169399	protein_coding		9	1	73113426	841
ENSMUSG00000021957	protein_coding	Tkt	ENSMUST00000160274	processed_transcript		14	1	30548359	391
ENSMUSG00000021007	protein_coding	Spata7	ENSMUST00000101144	protein_coding		12	1	98628167	1541
ENSMUSG00000025332	protein_coding	Kdm5c	ENSMUST00000155793	protein_coding		X	1	152271913	756
ENSMUSG00000087171	lincRNA	Gm12962	ENSMUST00000138697	lincRNA		4	-1	131677845	580
ENSMUSG00000079614	protein_coding	Seh1l	ENSMUST00000025421	protein_coding	principal2	18	1	67774876	3542
ENSMUSG00000016756	protein_coding	Cmah	ENSMUST00000225046	retained_intron		13	1	24415123	1653
ENSMUSG00000038248	protein_coding	Sobp	ENSMUST00000040275	protein_coding	principal1	10	-1	43174530	4980
ENSMUSG00000016756	protein_coding	Cmah	ENSMUST00000144621	processed_transcript		13	1	24416901	724
ENSMUSG00000021007	protein_coding	Spata7	ENSMUST00000130136	retained_intron		12	1	98628190	938
ENSMUSG00000016756	protein_coding	Cmah	ENSMUST00000142882	processed_transcript		13	1	24417224	622
ENSMUSG00000053729	protein_coding	Spinkl	ENSMUST00000237958	processed_transcript		18	-1	44175073	369
ENSMUSG00000079614	protein_coding	Seh1l	ENSMUST00000237700	protein_coding	alternative1	18	1	67774975	1684
ENSMUSG00000016756	protein_coding	Cmah	ENSMUST00000167746	protein_coding	principal1	13	1	24327420	9727
ENSMUSG00000021007	protein_coding	Spata7	ENSMUST00000101146	protein_coding		12	1	98628197	1913
ENSMUSG00000038248	protein_coding	Sobp	ENSMUST00000189987	processed_transcript		10	-1	43174521	1095
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000227569	retained_intron		15	-1	73423116	4678
ENSMUSG00000033047	protein_coding	Eif3l	ENSMUST00000229338	retained_intron		15	1	79075248	1157
ENSMUSG00000118631	antisense	AL590864.1	ENSMUST00000239334	antisense		13	-1	24329040	794
ENSMUSG00000021007	protein_coding	Spata7	ENSMUST00000221273	retained_intron		12	1	98629970	2774
ENSMUSG00000021007	protein_coding	Spata7	ENSMUST00000222378	retained_intron		12	1	98633010	1914
ENSMUSG00000042594	protein_coding	Sh2b3	ENSMUST00000040308	protein_coding	principal3	5	-1	121836850	2530
ENSMUSG00000033047	protein_coding	Eif3l	ENSMUST00000229310	protein_coding		15	1	79075258	274
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000108271	protein_coding	alternative2	3	-1	30140423	3851
ENSMUSG00000021007	protein_coding	Spata7	ENSMUST00000152482	retained_intron		12	1	98663645	896
ENSMUSG00000084788	antisense	Gm11342	ENSMUST00000224879	antisense		13	-1	24414803	1324
ENSMUSG00000073573	protein_coding	Spink11	ENSMUST00000239421	protein_coding	alternative2	18	-1	44196177	746
ENSMUSG00000042594	protein_coding	Sh2b3	ENSMUST00000118580	protein_coding	alternative2	5	-1	121836817	2393
ENSMUSG00000033047	protein_coding	Eif3l	ENSMUST00000230032	retained_intron		15	1	79083049	2345
ENSMUSG00000032096	protein_coding	Arcn1	ENSMUST00000034607	protein_coding	principal1	9	-1	44767845	4072
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000228628	retained_intron		15	-1	73343327	3254
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000173059	protein_coding		3	-1	30238162	2680
ENSMUSG00000084788	antisense	Gm11342	ENSMUST00000148981	antisense		13	-1	24337364	749
ENSMUSG00000073573	protein_coding	Spink11	ENSMUST00000185266	retained_intron		18	-1	44192345	1891
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000226742	retained_intron		15	-1	73343327	2820
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000174413	protein_coding		3	-1	29997663	1942
ENSMUSG00000067613	protein_coding	Krt83	ENSMUST00000023718	protein_coding	principal1	15	-1	101491512	1757
ENSMUSG00000084788	antisense	Gm11342	ENSMUST00000147704	antisense		13	-1	24375950	621
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000228457	retained_intron		15	-1	73216240	259
ENSMUSG00000020363	protein_coding	Gfpt2	ENSMUST00000130129	retained_intron		11	1	49794178	2865
ENSMUSG00000032096	protein_coding	Arcn1	ENSMUST00000217194	retained_intron		9	-1	44750508	2616
ENSMUSG00000083165	processed_pseudogene	Gm11344	ENSMUST00000122011	processed_pseudogene		13	-1	24410440	335
ENSMUSG00000079477	protein_coding	Rab7	ENSMUST00000113600	protein_coding	principal1	6	-1	88045270	2159
ENSMUSG00000042594	protein_coding	Sh2b3	ENSMUST00000197892	protein_coding		5	-1	121837646	850
ENSMUSG00000073573	protein_coding	Spink11	ENSMUST00000097587	protein_coding	principal2	18	-1	44196177	746
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000227686	protein_coding		15	-1	73243016	485
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000146659	processed_transcript		4	1	106912298	1634
ENSMUSG00000042594	protein_coding	Sh2b3	ENSMUST00000137682	protein_coding		5	-1	121836264	642
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000166001	protein_coding	alternative2	3	-1	29997702	2914
ENSMUSG00000081097	processed_pseudogene	Gm12135	ENSMUST00000119170	processed_pseudogene		11	1	40505598	466
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000148842	processed_transcript		4	1	106923185	377
ENSMUSG00000110455	antisense	Gm45904	ENSMUST00000213082	antisense		8	-1	113004997	2330
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000227395	protein_coding		15	-1	73243247	498
ENSMUSG00000106110	TEC	Gm43571	ENSMUST00000200067	TEC		5	1	121715109	3098
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000138475	processed_transcript		4	1	106923225	629
ENSMUSG00000067613	protein_coding	Krt83	ENSMUST00000159029	retained_intron		15	-1	101488068	1049
ENSMUSG00000032096	protein_coding	Arcn1	ENSMUST00000150160	retained_intron		9	-1	44767798	2956
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000141963	processed_transcript		4	1	106941698	1557
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000173899	protein_coding		3	-1	30509514	3031
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000226791	protein_coding		15	-1	73394699	517
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000124936	processed_transcript		4	1	106955859	1719
ENSMUSG00000032096	protein_coding	Arcn1	ENSMUST00000125164	processed_transcript		9	-1	44760092	739
ENSMUSG00000068574	protein_coding	Olfr458	ENSMUST00000216650	protein_coding	principal1	6	-1	42465196	1799
ENSMUSG00000104872	antisense	1700008B11Rik	ENSMUST00000198145	antisense		5	1	121835195	634
ENSMUSG00000032096	protein_coding	Arcn1	ENSMUST00000217199	retained_intron		9	-1	44764556	3211
ENSMUSG00000105179	TEC	Gm42866	ENSMUST00000195919	TEC		5	1	121742417	3304
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000131440	protein_coding		4	1	106966426	359
ENSMUSG00000032096	protein_coding	Arcn1	ENSMUST00000215140	retained_intron		9	-1	44767798	3497
ENSMUSG00000068574	protein_coding	Olfr458	ENSMUST00000090156	protein_coding	principal1	6	-1	42461017	942
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000172697	protein_coding		3	-1	30509822	3204
ENSMUSG00000010435	protein_coding	Spaca7	ENSMUST00000211182	nonsense_mediated_decay		8	1	12573029	907
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000228180	protein_coding		15	-1	73423212	1333
ENSMUSG00000089729	antisense	Gm16552	ENSMUST00000162348	antisense		5	-1	121727403	685
ENSMUSG00000079477	protein_coding	Rab7	ENSMUST00000113598	protein_coding	principal1	6	-1	88045017	2031
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000137786	processed_transcript		4	1	107028193	656
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000226466	protein_coding		15	-1	73423084	488
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000131111	processed_transcript		4	1	107030832	568
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000226848	protein_coding		15	-1	73423078	364
ENSMUSG00000107036	lincRNA	Gm7596	ENSMUST00000201290	lincRNA		5	-1	32397908	665
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000133827	processed_transcript		4	1	107038202	888
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000226893	protein_coding		15	-1	73423280	318
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000156288	processed_transcript		4	1	107038233	775
ENSMUSG00000092375	antisense	A730060N03Rik	ENSMUST00000174277	antisense		15	1	78119706	2124
ENSMUSG00000107036	lincRNA	Gm7596	ENSMUST00000202171	lincRNA		5	-1	32393306	737
ENSMUSG00000061887	protein_coding	Ssbp3	ENSMUST00000136487	processed_transcript		4	1	107046954	846
ENSMUSG00000022607	protein_coding	Ptk2	ENSMUST00000227435	retained_intron		15	-1	73423125	4580
ENSMUSG00000079477	protein_coding	Rab7	ENSMUST00000113597	protein_coding	principal1	6	-1	88019783	1859
ENSMUSG00000082390	processed_pseudogene	Gm12136	ENSMUST00000120460	processed_pseudogene		11	-1	40570525	1209
ENSMUSG00000031772	protein_coding	Cntnap4	ENSMUST00000125976	retained_intron		8	1	112570043	3862
ENSMUSG00000085581	antisense	Gm12786	ENSMUST00000129617	antisense		4	-1	107022499	644
ENSMUSG00000061740	protein_coding	Cyp2d22	ENSMUST00000023083	protein_coding	principal1	15	-1	82380257	2769
ENSMUSG00000107211	processed_pseudogene	Gm5864	ENSMUST00000202263	processed_pseudogene		5	1	32420003	970
ENSMUSG00000079477	protein_coding	Rab7	ENSMUST00000113596	protein_coding	principal1	6	-1	88045245	1657
ENSMUSG00000032215	protein_coding	Rsl24d1	ENSMUST00000034738	protein_coding	principal1	9	1	73113448	1543
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000162611	processed_transcript		5	1	121711337	461
ENSMUSG00000074252	TEC	Gm10654	ENSMUST00000098653	TEC		8	1	70931405	1633
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000108610	protein_coding	principal1	11	-1	69920630	1409
ENSMUSG00000118255	processed_pseudogene	Gm50369	ENSMUST00000238005	processed_pseudogene		18	-1	85013335	380
ENSMUSG00000091983	protein_coding	Olfr457	ENSMUST00000204324	protein_coding	principal1	6	-1	42476325	4275
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000172754	nonsense_mediated_decay		3	-1	30548008	3182
ENSMUSG00000118198	lincRNA	Gm50370	ENSMUST00000237500	lincRNA		18	1	85071836	117
ENSMUSG00000033597	protein_coding	Caskin1	ENSMUST00000024958	protein_coding	principal1	17	1	24488783	5938
ENSMUSG00000032215	protein_coding	Rsl24d1	ENSMUST00000113505	nonsense_mediated_decay		9	1	73113503	734
ENSMUSG00000079477	protein_coding	Rab7	ENSMUST00000095048	protein_coding	principal1	6	-1	88019783	1275
ENSMUSG00000045775	protein_coding	Slc16a5	ENSMUST00000106532	protein_coding	principal1	11	1	115462474	2062
ENSMUSG00000032215	protein_coding	Rsl24d1	ENSMUST00000165177	protein_coding		9	1	73114596	597
ENSMUSG00000091983	protein_coding	Olfr457	ENSMUST00000203396	protein_coding	principal1	6	-1	42476335	4404
ENSMUSG00000061740	protein_coding	Cyp2d22	ENSMUST00000230663	retained_intron		15	-1	82380260	3398
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000108862	protein_coding	alternative2	2	1	180967225	2382
ENSMUSG00000116404	processed_pseudogene	Gm49541	ENSMUST00000229324	processed_pseudogene		15	1	90702369	190
ENSMUSG00000061740	protein_coding	Cyp2d22	ENSMUST00000228986	protein_coding		15	-1	82375900	721
ENSMUSG00000116136	processed_pseudogene	Gm3861	ENSMUST00000229639	processed_pseudogene		15	1	90723648	349
ENSMUSG00000091983	protein_coding	Olfr457	ENSMUST00000170504	protein_coding	principal1	6	-1	42472200	1039
ENSMUSG00000079477	protein_coding	Rab7	ENSMUST00000203674	protein_coding		6	-1	88045198	424
ENSMUSG00000061740	protein_coding	Cyp2d22	ENSMUST00000229599	retained_intron		15	-1	82373446	666
ENSMUSG00000033597	protein_coding	Caskin1	ENSMUST00000234717	protein_coding		17	1	24488875	5630
ENSMUSG00000061740	protein_coding	Cyp2d22	ENSMUST00000230370	retained_intron		15	-1	82373838	375
ENSMUSG00000079477	protein_coding	Rab7	ENSMUST00000204126	protein_coding		6	-1	88045231	550
ENSMUSG00000067870	processed_pseudogene	Rpl31-ps8	ENSMUST00000181935	processed_pseudogene		15	-1	90764656	378
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000108612	protein_coding	principal1	11	-1	69920940	1259
ENSMUSG00000061740	protein_coding	Cyp2d22	ENSMUST00000229438	retained_intron		15	-1	82380243	895
ENSMUSG00000033597	protein_coding	Caskin1	ENSMUST00000234030	retained_intron		17	1	24500426	715
ENSMUSG00000067869	processed_pseudogene	Tcea1-ps1	ENSMUST00000117942	processed_pseudogene		15	1	90882615	904
ENSMUSG00000044927	protein_coding	H1f10	ENSMUST00000056403	protein_coding	principal1	6	-1	87981637	1217
ENSMUSG00000110554	lincRNA	Gm35256	ENSMUST00000212780	lincRNA		8	1	71026792	3269
ENSMUSG00000116210	transcribed_processed_pseudogene	Spn-ps	ENSMUST00000230085	processed_transcript		15	-1	90898428	755
ENSMUSG00000019146	protein_coding	Cacng2	ENSMUST00000019290	protein_coding	principal1	15	-1	78120028	5510
ENSMUSG00000010435	protein_coding	Spaca7	ENSMUST00000210276	protein_coding	alternative2	8	1	12573029	715
ENSMUSG00000116210	transcribed_processed_pseudogene	Spn-ps	ENSMUST00000229463	transcribed_processed_pseudogene		15	-1	90899022	1108
ENSMUSG00000045775	protein_coding	Slc16a5	ENSMUST00000092445	protein_coding		11	1	115462478	1538
ENSMUSG00000033597	protein_coding	Caskin1	ENSMUST00000235032	retained_intron		17	1	24501678	783
ENSMUSG00000108049	TEC	Gm44168	ENSMUST00000204835	TEC		6	1	87986191	3539
ENSMUSG00000010435	protein_coding	Spaca7	ENSMUST00000210424	nonsense_mediated_decay		8	1	12573036	967
ENSMUSG00000116428	processed_transcript	Gm36618	ENSMUST00000230674	processed_transcript		15	1	90899761	1405
ENSMUSG00000116428	processed_transcript	Gm36618	ENSMUST00000229921	lincRNA		15	1	90907429	976
ENSMUSG00000045775	protein_coding	Slc16a5	ENSMUST00000153466	protein_coding		11	1	115462506	516
ENSMUSG00000031538	protein_coding	Plat	ENSMUST00000210960	retained_intron		8	1	22757727	4042
ENSMUSG00000103556	TEC	Gm38215	ENSMUST00000192321	TEC		9	1	73132689	2233
ENSMUSG00000021957	protein_coding	Tkt	ENSMUST00000022529	protein_coding	principal1	14	1	30549131	3223
ENSMUSG00000084950	antisense	Gm5577	ENSMUST00000134600	antisense		6	1	87980883	1434
ENSMUSG00000025004	protein_coding	Cyp2c40	ENSMUST00000160476	protein_coding	alternative2	19	-1	39812814	1803
ENSMUSG00000066478	processed_pseudogene	Gm5745	ENSMUST00000183748	processed_pseudogene		9	-1	73175741	313
ENSMUSG00000093565	antisense	Rab26os	ENSMUST00000176921	antisense		17	1	24528248	298
ENSMUSG00000084950	antisense	Gm5577	ENSMUST00000143871	antisense		6	1	87981683	1415
ENSMUSG00000101854	lincRNA	1700026F02Rik	ENSMUST00000211987	lincRNA		8	-1	71026764	928
ENSMUSG00000021957	protein_coding	Tkt	ENSMUST00000160189	retained_intron		14	1	30549181	3159
ENSMUSG00000093565	antisense	Rab26os	ENSMUST00000176215	antisense		17	1	24528267	477
ENSMUSG00000098875	lincRNA	Gm27211	ENSMUST00000183507	lincRNA		9	1	73192483	631
ENSMUSG00000025004	protein_coding	Cyp2c40	ENSMUST00000162630	nonsense_mediated_decay		19	-1	39812814	1638
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000108611	protein_coding	principal1	11	-1	69920940	1353
ENSMUSG00000020363	protein_coding	Gfpt2	ENSMUST00000020629	protein_coding	principal1	11	1	49794187	2947
ENSMUSG00000101854	lincRNA	1700026F02Rik	ENSMUST00000211950	lincRNA		8	-1	71026764	1082
ENSMUSG00000104902	processed_pseudogene	Gm30517	ENSMUST00000197350	processed_pseudogene		3	1	121277524	772
ENSMUSG00000117423	antisense	Gm33508	ENSMUST00000234740	antisense		17	1	24533862	676
ENSMUSG00000021957	protein_coding	Tkt	ENSMUST00000162356	nonsense_mediated_decay		14	1	30549211	465
ENSMUSG00000025004	protein_coding	Cyp2c40	ENSMUST00000163090	retained_intron		19	-1	39807430	347
ENSMUSG00000106619	processed_pseudogene	Gm9353	ENSMUST00000200472	processed_pseudogene		3	-1	121250737	604
ENSMUSG00000117423	antisense	Gm33508	ENSMUST00000234764	antisense		17	1	24533914	1524
ENSMUSG00000021957	protein_coding	Tkt	ENSMUST00000223717	protein_coding		14	1	30549357	1619
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000170212	processed_transcript		3	-1	30013061	1586
ENSMUSG00000101854	lincRNA	1700026F02Rik	ENSMUST00000188626	lincRNA		8	-1	71026755	483
ENSMUSG00000084950	antisense	Gm5577	ENSMUST00000153372	antisense		6	1	87981683	815
ENSMUSG00000101854	lincRNA	1700026F02Rik	ENSMUST00000212266	lincRNA		8	-1	71085758	787
ENSMUSG00000047911	protein_coding	Npm2	ENSMUST00000062629	protein_coding	principal1	14	-1	70653084	997
ENSMUSG00000010435	protein_coding	Spaca7	ENSMUST00000010579	protein_coding	principal2	8	1	12573049	762
ENSMUSG00000101854	lincRNA	1700026F02Rik	ENSMUST00000170101	lincRNA		8	-1	71043040	192
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000174428	retained_intron		3	-1	30013204	2803
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000174406	protein_coding		3	-1	30011439	524
ENSMUSG00000021957	protein_coding	Tkt	ENSMUST00000225857	processed_transcript		14	1	30557609	1962
ENSMUSG00000021957	protein_coding	Tkt	ENSMUST00000223633	retained_intron		14	1	30559690	2438
ENSMUSG00000117854	processed_pseudogene	Gm7612	ENSMUST00000237113	processed_pseudogene		18	-1	85716725	795
ENSMUSG00000025004	protein_coding	Cyp2c40	ENSMUST00000162434	processed_transcript		19	-1	39812749	693
ENSMUSG00000047911	protein_coding	Npm2	ENSMUST00000228473	non_stop_decay		14	-1	70659244	649
ENSMUSG00000021957	protein_coding	Tkt	ENSMUST00000225039	retained_intron		14	1	30567999	1401
ENSMUSG00000086904	lincRNA	Gm13404	ENSMUST00000156633	lincRNA		2	1	33978246	1960
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000173411	processed_transcript		3	-1	30509733	1302
ENSMUSG00000118241	processed_pseudogene	Gm5824	ENSMUST00000237360	processed_pseudogene		18	-1	85848729	1450
ENSMUSG00000010435	protein_coding	Spaca7	ENSMUST00000209428	protein_coding	alternative2	8	1	12573049	758
ENSMUSG00000115387	processed_pseudogene	Gm49244	ENSMUST00000228317	processed_pseudogene		14	1	70674450	442
ENSMUSG00000025004	protein_coding	Cyp2c40	ENSMUST00000162507	protein_coding		19	-1	39812744	382
ENSMUSG00000021957	protein_coding	Tkt	ENSMUST00000160406	retained_intron		14	1	30569705	597
ENSMUSG00000117906	processed_pseudogene	Gm50381	ENSMUST00000237292	processed_pseudogene		18	-1	86097244	291
ENSMUSG00000103413	lincRNA	Gm38389	ENSMUST00000147871	lincRNA		2	-1	34111444	653
ENSMUSG00000055409	protein_coding	Nell1	ENSMUST00000151721	protein_coding		7	1	49974864	1662
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000195690	retained_intron		3	-1	30237960	2518
ENSMUSG00000097421	bidirectional_promoter_lncRNA	D630011A20Rik	ENSMUST00000180858	bidirectional_promoter_lncRNA		8	-1	12573320	500
ENSMUSG00000025004	protein_coding	Cyp2c40	ENSMUST00000239028	protein_coding	principal2	19	-1	39812814	1800
ENSMUSG00000022102	protein_coding	Dok2	ENSMUST00000171481	processed_transcript		14	1	70766036	512
ENSMUSG00000045775	protein_coding	Slc16a5	ENSMUST00000125251	processed_transcript		11	1	115462564	460
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000173022	processed_transcript		3	-1	30509487	1075
ENSMUSG00000027684	protein_coding	Mecom	ENSMUST00000061088	protein_coding		3	-1	30238319	348
ENSMUSG00000022102	protein_coding	Dok2	ENSMUST00000169599	processed_transcript		14	1	70766049	388
ENSMUSG00000104486	TEC	Gm38066	ENSMUST00000193223	TEC		3	-1	30161886	1634
ENSMUSG00000087461	lincRNA	C230014O12Rik	ENSMUST00000134921	lincRNA		2	-1	34107729	2668
ENSMUSG00000078776	protein_coding	9530053A07Rik	ENSMUST00000130693	retained_intron		7	1	28129816	4650
ENSMUSG00000087461	lincRNA	C230014O12Rik	ENSMUST00000149707	lincRNA		2	-1	34107735	587
ENSMUSG00000102460	TEC	Gm38197	ENSMUST00000192320	TEC		3	-1	30227694	2122
ENSMUSG00000078776	protein_coding	9530053A07Rik	ENSMUST00000129051	retained_intron		7	1	28129816	3005
ENSMUSG00000103832	TEC	Gm37611	ENSMUST00000195250	TEC		9	-1	73553870	2028
ENSMUSG00000045775	protein_coding	Slc16a5	ENSMUST00000133636	processed_transcript		11	1	115463800	2044
ENSMUSG00000103738	TEC	Gm37652	ENSMUST00000195290	TEC		3	-1	30503813	2095
ENSMUSG00000099064	processed_pseudogene	Gm27148	ENSMUST00000185086	processed_pseudogene		9	-1	73676692	160
ENSMUSG00000020253	protein_coding	Ppm1m	ENSMUST00000136431	protein_coding		9	-1	106196888	680
ENSMUSG00000047141	protein_coding	Zfp654	ENSMUST00000207826	protein_coding	principal2	16	-1	64851652	6261
ENSMUSG00000045775	protein_coding	Slc16a5	ENSMUST00000140567	processed_transcript		11	1	115463815	323
ENSMUSG00000034826	protein_coding	Nup54	ENSMUST00000038514	protein_coding	principal1	5	-1	92435219	2352
ENSMUSG00000103202	TEC	Gm37326	ENSMUST00000192828	TEC		9	-1	73860178	3071
ENSMUSG00000045775	protein_coding	Slc16a5	ENSMUST00000139318	processed_transcript		11	1	115463818	370
ENSMUSG00000029182	protein_coding	Fam166c	ENSMUST00000127815	protein_coding		5	1	30466047	660
ENSMUSG00000045775	protein_coding	Slc16a5	ENSMUST00000146500	processed_transcript		11	1	115463824	411
ENSMUSG00000047141	protein_coding	Zfp654	ENSMUST00000052588	protein_coding	alternative2	16	-1	64786321	4741
ENSMUSG00000034826	protein_coding	Nup54	ENSMUST00000123694	retained_intron		5	-1	92417972	433
ENSMUSG00000085702	antisense	Mecomos	ENSMUST00000125611	antisense		3	1	30012379	5510
ENSMUSG00000042121	protein_coding	Ssh1	ENSMUST00000159592	protein_coding	principal2	5	-1	113993894	8436
ENSMUSG00000080839	processed_pseudogene	Gm11625	ENSMUST00000119535	processed_pseudogene		11	1	101476226	296
ENSMUSG00000015597	protein_coding	Zfp318	ENSMUST00000113481	protein_coding	principal4	17	1	46383731	13060
ENSMUSG00000085702	antisense	Mecomos	ENSMUST00000173827	antisense		3	1	30017528	826
ENSMUSG00000034826	protein_coding	Nup54	ENSMUST00000201228	retained_intron		5	-1	92424931	713
ENSMUSG00000045775	protein_coding	Slc16a5	ENSMUST00000140739	retained_intron		11	1	115464570	2340
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000108613	protein_coding	principal1	11	-1	69921386	1343
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000043419	protein_coding	principal1	11	-1	69921386	1437
ENSMUSG00000085651	antisense	Gm11695	ENSMUST00000144230	antisense		11	-1	115463454	407
ENSMUSG00000104079	TEC	Gm37024	ENSMUST00000192224	TEC		3	1	30488426	868
ENSMUSG00000042121	protein_coding	Ssh1	ENSMUST00000112298	protein_coding	alternative2	5	-1	113993779	5584
ENSMUSG00000022102	protein_coding	Dok2	ENSMUST00000022698	protein_coding	principal1	14	1	70774304	1795
ENSMUSG00000103870	TEC	Gm38362	ENSMUST00000192999	TEC		3	-1	30274385	2064
ENSMUSG00000034826	protein_coding	Nup54	ENSMUST00000142525	processed_transcript		5	-1	92434546	560
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000029092	protein_coding	principal3	2	1	180967234	2714
ENSMUSG00000034826	protein_coding	Nup54	ENSMUST00000122893	retained_intron		5	-1	92435091	631
ENSMUSG00000069074	TEC	Gm10258	ENSMUST00000091270	TEC		3	-1	30269947	2123
ENSMUSG00000015597	protein_coding	Zfp318	ENSMUST00000138127	protein_coding	alternative2	17	1	46383751	3936
ENSMUSG00000031538	protein_coding	Plat	ENSMUST00000033941	protein_coding	principal1	8	1	22757747	2525
ENSMUSG00000022102	protein_coding	Dok2	ENSMUST00000169106	processed_transcript		14	1	70773272	404
ENSMUSG00000042121	protein_coding	Ssh1	ENSMUST00000077689	protein_coding	alternative2	5	-1	113989743	3164
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000070996	protein_coding	principal1	11	-1	69921386	1373
ENSMUSG00000034826	protein_coding	Nup54	ENSMUST00000146470	nonsense_mediated_decay		5	-1	92435114	445
ENSMUSG00000022102	protein_coding	Dok2	ENSMUST00000171864	retained_intron		14	1	70775879	247
ENSMUSG00000042121	protein_coding	Ssh1	ENSMUST00000159510	nonsense_mediated_decay		5	-1	113993827	418
ENSMUSG00000020455	protein_coding	Trim11	ENSMUST00000108809	protein_coding		11	1	58978093	3522
ENSMUSG00000031538	protein_coding	Plat	ENSMUST00000211033	processed_transcript		8	1	22757795	612
ENSMUSG00000030048	protein_coding	Gkn3	ENSMUST00000032127	protein_coding	principal1	6	-1	87388935	856
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000071026	protein_coding	principal1	11	-1	69921958	1286
ENSMUSG00000042121	protein_coding	Ssh1	ENSMUST00000162396	protein_coding		5	-1	113966756	464
ENSMUSG00000022102	protein_coding	Dok2	ENSMUST00000165654	processed_transcript		14	1	70776178	372
ENSMUSG00000020799	protein_coding	Tekt1	ENSMUST00000108502	protein_coding	principal1	11	-1	72361296	1403
ENSMUSG00000080835	processed_pseudogene	Gm12137	ENSMUST00000119565	processed_pseudogene		11	1	40612718	346
ENSMUSG00000029182	protein_coding	Fam166c	ENSMUST00000199129	nonsense_mediated_decay		5	1	30466055	697
ENSMUSG00000042121	protein_coding	Ssh1	ENSMUST00000162322	retained_intron		5	-1	113993767	419
ENSMUSG00000022102	protein_coding	Dok2	ENSMUST00000168355	processed_transcript		14	1	70776363	355
ENSMUSG00000118283	processed_pseudogene	Gm7623	ENSMUST00000238105	processed_pseudogene		18	-1	86243520	556
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000108609	protein_coding	principal1	11	-1	69921064	849
ENSMUSG00000015597	protein_coding	Zfp318	ENSMUST00000152472	nonsense_mediated_decay		17	1	46400056	748
ENSMUSG00000020455	protein_coding	Trim11	ENSMUST00000108810	protein_coding		11	1	58978115	2301
ENSMUSG00000034826	protein_coding	Nup54	ENSMUST00000135112	protein_coding		5	-1	92435123	420
ENSMUSG00000022102	protein_coding	Dok2	ENSMUST00000164691	retained_intron		14	1	70776710	425
ENSMUSG00000015597	protein_coding	Zfp318	ENSMUST00000123733	retained_intron		17	1	46405855	573
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000108608	protein_coding	principal1	11	-1	69921064	775
ENSMUSG00000078776	protein_coding	9530053A07Rik	ENSMUST00000150948	protein_coding	principal1	7	1	28129816	7895
ENSMUSG00000034826	protein_coding	Nup54	ENSMUST00000130156	protein_coding		5	-1	92434757	397
ENSMUSG00000090631	protein_coding	Olfr456	ENSMUST00000057251	protein_coding	principal1	6	-1	42487214	1052
ENSMUSG00000110664	processed_pseudogene	Aprt-ps	ENSMUST00000212311	processed_pseudogene		8	1	71223949	505
ENSMUSG00000062042	protein_coding	Olfr294	ENSMUST00000078588	protein_coding	principal1	7	-1	86616643	1008
ENSMUSG00000017858	protein_coding	Ift52	ENSMUST00000018002	protein_coding	principal1	2	1	163017354	2248
ENSMUSG00000079657	protein_coding	Rab26	ENSMUST00000061764	protein_coding		17	-1	24533726	1291
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000108607	protein_coding	principal1	11	-1	69921190	852
ENSMUSG00000015597	protein_coding	Zfp318	ENSMUST00000136017	retained_intron		17	1	46409629	958
ENSMUSG00000078776	protein_coding	9530053A07Rik	ENSMUST00000059886	protein_coding	principal1	7	1	28129466	7922
ENSMUSG00000020455	protein_coding	Trim11	ENSMUST00000093061	protein_coding	principal1	11	1	58978116	2251
ENSMUSG00000082087	processed_pseudogene	Gm12138	ENSMUST00000122180	processed_pseudogene		11	-1	40673856	951
ENSMUSG00000031772	protein_coding	Cntnap4	ENSMUST00000118171	protein_coding	alternative1	8	1	112570043	4860
ENSMUSG00000017858	protein_coding	Ift52	ENSMUST00000150396	protein_coding		2	1	163017491	874
ENSMUSG00000020799	protein_coding	Tekt1	ENSMUST00000108503	protein_coding	principal1	11	-1	72361873	1397
ENSMUSG00000031772	protein_coding	Cntnap4	ENSMUST00000125196	retained_intron		8	1	112570055	2651
ENSMUSG00000117919	lincRNA	Gm41717	ENSMUST00000236086	lincRNA		18	1	44315707	1208
ENSMUSG00000082951	processed_pseudogene	Gm13359	ENSMUST00000119000	processed_pseudogene		2	-1	26723081	695
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000153652	protein_coding		11	-1	69918304	840
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000108861	protein_coding	alternative2	2	1	180967245	1885
ENSMUSG00000083272	processed_pseudogene	Gm12550	ENSMUST00000118478	processed_pseudogene		4	-1	86442341	329
ENSMUSG00000017858	protein_coding	Ift52	ENSMUST00000125144	processed_transcript		2	1	163017519	332
ENSMUSG00000063394	protein_coding	Olfr293	ENSMUST00000214401	protein_coding	principal1	7	1	86649061	2852
ENSMUSG00000031772	protein_coding	Cntnap4	ENSMUST00000127636	processed_transcript		8	1	112731399	278
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000152589	protein_coding		11	-1	69920919	669
ENSMUSG00000078177	processed_pseudogene	Gm4877	ENSMUST00000104977	processed_pseudogene		6	-1	42520313	798
ENSMUSG00000031772	protein_coding	Cntnap4	ENSMUST00000140753	processed_transcript		8	1	112773654	553
ENSMUSG00000063394	protein_coding	Olfr293	ENSMUST00000215280	protein_coding	principal1	7	1	86649061	2683
ENSMUSG00000017858	protein_coding	Ift52	ENSMUST00000152201	processed_transcript		2	1	163022443	750
ENSMUSG00000020799	protein_coding	Tekt1	ENSMUST00000021155	protein_coding	principal1	11	-1	72362442	1447
ENSMUSG00000078812	protein_coding	Eif5a	ENSMUST00000164359	protein_coding	principal1	11	-1	69921085	1281
ENSMUSG00000063394	protein_coding	Olfr293	ENSMUST00000081474	protein_coding	principal1	7	1	86663664	1011
ENSMUSG00000071494	protein_coding	Olfr455	ENSMUST00000217978	protein_coding	principal1	6	-1	42547587	4054
ENSMUSG00000110767	lincRNA	Gm31432	ENSMUST00000217323	lincRNA		9	1	46532757	269
ENSMUSG00000029182	protein_coding	Fam166c	ENSMUST00000031078	protein_coding	principal1	5	1	30466059	731
ENSMUSG00000110767	lincRNA	Gm31432	ENSMUST00000214727	lincRNA		9	1	46532757	538
ENSMUSG00000015461	protein_coding	Atf6b	ENSMUST00000015605	protein_coding	principal2	17	1	34647146	2566
ENSMUSG00000111649	lincRNA	Gm48945	ENSMUST00000217349	lincRNA		9	1	46607255	3869
ENSMUSG00000071494	protein_coding	Olfr455	ENSMUST00000171307	protein_coding	principal1	6	-1	42539020	954
ENSMUSG00000116412	processed_pseudogene	Gm49505	ENSMUST00000230546	processed_pseudogene		16	1	3357957	250
ENSMUSG00000031772	protein_coding	Cntnap4	ENSMUST00000034225	protein_coding	principal2	8	1	112570043	4848
ENSMUSG00000035142	protein_coding	Nubpl	ENSMUST00000159485	retained_intron		12	1	52097761	896
ENSMUSG00000107747	processed_pseudogene	Gm5881	ENSMUST00000204737	processed_pseudogene		6	-1	96033369	367
ENSMUSG00000102794	lincRNA	Gm37712	ENSMUST00000194295	lincRNA		1	-1	184382441	647
ENSMUSG00000020253	protein_coding	Ppm1m	ENSMUST00000076258	protein_coding		9	-1	106198942	1811
ENSMUSG00000029182	protein_coding	Fam166c	ENSMUST00000114743	protein_coding		5	1	30466084	729
ENSMUSG00000114576	unprocessed_pseudogene	Naip3-ps1	ENSMUST00000224886	unprocessed_pseudogene		13	-1	100278817	1571
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000127569	protein_coding	principal1	9	-1	66593142	5607
ENSMUSG00000067206	protein_coding	Lrrc66	ENSMUST00000087177	protein_coding	principal1	5	-1	73632526	3198
ENSMUSG00000062151	protein_coding	Unc13c	ENSMUST00000184666	protein_coding	principal1	9	-1	73968966	8796
ENSMUSG00000015461	protein_coding	Atf6b	ENSMUST00000174614	nonsense_mediated_decay		17	1	34647201	386
ENSMUSG00000018656	protein_coding	Tcaf3	ENSMUST00000151898	processed_transcript		6	-1	42587629	417
ENSMUSG00000062151	protein_coding	Unc13c	ENSMUST00000075245	protein_coding	principal1	9	-1	73933567	6633
ENSMUSG00000054199	protein_coding	Gon4l	ENSMUST00000107498	protein_coding	principal2	3	1	88835231	7537
ENSMUSG00000060688	protein_coding	Olfr292	ENSMUST00000080165	protein_coding	principal1	7	1	86688330	3211
ENSMUSG00000015461	protein_coding	Atf6b	ENSMUST00000174519	nonsense_mediated_decay		17	1	34647201	372
ENSMUSG00000067206	protein_coding	Lrrc66	ENSMUST00000152215	protein_coding		5	-1	73630312	375
ENSMUSG00000086856	lincRNA	Gm16080	ENSMUST00000152128	lincRNA		4	-1	131710508	692
ENSMUSG00000020253	protein_coding	Ppm1m	ENSMUST00000140761	protein_coding	principal1	9	-1	106199275	1846
ENSMUSG00000015461	protein_coding	Atf6b	ENSMUST00000173984	protein_coding	alternative2	17	1	34647211	2315
ENSMUSG00000054199	protein_coding	Gon4l	ENSMUST00000212694	protein_coding		3	1	88855664	1505
ENSMUSG00000043243	protein_coding	Fam129c	ENSMUST00000143662	protein_coding	principal1	8	1	71597648	2267
ENSMUSG00000015461	protein_coding	Atf6b	ENSMUST00000174156	retained_intron		17	1	34651627	395
ENSMUSG00000092008	protein_coding	Cyp2c69	ENSMUST00000238049	nonsense_mediated_decay		19	-1	39886799	1637
ENSMUSG00000032405	protein_coding	Pias1	ENSMUST00000098651	protein_coding	principal1	9	-1	62980879	5564
ENSMUSG00000040666	protein_coding	Sh3bgr	ENSMUST00000048770	protein_coding	principal2	16	1	96200450	1341
ENSMUSG00000055409	protein_coding	Nell1	ENSMUST00000081872	protein_coding	principal1	7	1	49974864	6617
ENSMUSG00000020253	protein_coding	Ppm1m	ENSMUST00000215742	nonsense_mediated_decay		9	-1	106197798	521
ENSMUSG00000054199	protein_coding	Gon4l	ENSMUST00000198113	retained_intron		3	1	88890435	4083
ENSMUSG00000020253	protein_coding	Ppm1m	ENSMUST00000213197	nonsense_mediated_decay		9	-1	106199106	401
ENSMUSG00000032405	protein_coding	Pias1	ENSMUST00000215501	protein_coding		9	-1	62887387	2895
ENSMUSG00000032405	protein_coding	Pias1	ENSMUST00000214830	protein_coding		9	-1	62980883	2492
ENSMUSG00000040666	protein_coding	Sh3bgr	ENSMUST00000233945	protein_coding	alternative2	16	1	96200671	1121
ENSMUSG00000102682	lincRNA	Gm37223	ENSMUST00000195070	lincRNA		1	1	184358329	699
ENSMUSG00000027828	protein_coding	Ssr3	ENSMUST00000029414	protein_coding	principal1	3	-1	65392623	2957
ENSMUSG00000102682	lincRNA	Gm37223	ENSMUST00000193894	lincRNA		1	1	184358329	577
ENSMUSG00000020253	protein_coding	Ppm1m	ENSMUST00000150731	retained_intron		9	-1	106198338	700
ENSMUSG00000102682	lincRNA	Gm37223	ENSMUST00000194485	lincRNA		1	1	184358329	463
ENSMUSG00000054199	protein_coding	Gon4l	ENSMUST00000081695	protein_coding	principal2	3	1	88837016	7440
ENSMUSG00000032405	protein_coding	Pias1	ENSMUST00000216209	protein_coding		9	-1	62987924	739
ENSMUSG00000035142	protein_coding	Nubpl	ENSMUST00000159567	nonsense_mediated_decay		12	1	52132384	561
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000145629	retained_intron		2	1	180967265	3831
ENSMUSG00000040666	protein_coding	Sh3bgr	ENSMUST00000166952	protein_coding		16	1	96200704	405
ENSMUSG00000040666	protein_coding	Sh3bgr	ENSMUST00000132424	protein_coding		16	1	96200729	486
ENSMUSG00000102682	lincRNA	Gm37223	ENSMUST00000191890	lincRNA		1	1	184358333	490
ENSMUSG00000027828	protein_coding	Ssr3	ENSMUST00000139785	retained_intron		3	-1	65383381	745
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000110849	protein_coding		1	-1	192138010	3791
ENSMUSG00000035142	protein_coding	Nubpl	ENSMUST00000162111	processed_transcript		12	1	52176087	361
ENSMUSG00000032405	protein_coding	Pias1	ENSMUST00000215455	retained_intron		9	-1	62951996	748
ENSMUSG00000040666	protein_coding	Sh3bgr	ENSMUST00000129904	protein_coding		16	1	96205719	653
ENSMUSG00000018656	protein_coding	Tcaf3	ENSMUST00000069023	protein_coding	principal1	6	-1	42597372	3110
ENSMUSG00000054199	protein_coding	Gon4l	ENSMUST00000090942	protein_coding	alternative2	3	1	88837016	7443
ENSMUSG00000020253	protein_coding	Ppm1m	ENSMUST00000152359	processed_transcript		9	-1	106199746	444
ENSMUSG00000040666	protein_coding	Sh3bgr	ENSMUST00000157060	protein_coding		16	1	96206643	289
ENSMUSG00000102682	lincRNA	Gm37223	ENSMUST00000193592	lincRNA		1	1	184358344	490
ENSMUSG00000040666	protein_coding	Sh3bgr	ENSMUST00000145069	protein_coding		16	1	96220499	496
ENSMUSG00000035262	protein_coding	Amh	ENSMUST00000036016	protein_coding	principal1	10	1	80805243	1670
ENSMUSG00000092008	protein_coding	Cyp2c69	ENSMUST00000168838	protein_coding	principal1	19	-1	39886799	1646
ENSMUSG00000116107	processed_pseudogene	Gm49423	ENSMUST00000229735	processed_pseudogene		15	1	101503715	187
ENSMUSG00000108976	protein_coding	Gm29797	ENSMUST00000207856	protein_coding	principal1	2	1	181657034	755
ENSMUSG00000106218	antisense	Gm43713	ENSMUST00000198251	antisense		3	-1	88900001	1896
ENSMUSG00000040666	protein_coding	Sh3bgr	ENSMUST00000233577	protein_coding		16	1	96223840	453
ENSMUSG00000027828	protein_coding	Ssr3	ENSMUST00000119896	protein_coding		3	-1	65392553	1469
ENSMUSG00000055409	protein_coding	Nell1	ENSMUST00000145096	retained_intron		7	1	49975069	2010
ENSMUSG00000116188	processed_pseudogene	Gm49424	ENSMUST00000230835	processed_pseudogene		15	1	101506091	349
ENSMUSG00000055409	protein_coding	Nell1	ENSMUST00000107603	protein_coding		7	1	49975334	2756
ENSMUSG00000040666	protein_coding	Sh3bgr	ENSMUST00000171181	protein_coding	principal2	16	1	96200671	678
ENSMUSG00000102682	lincRNA	Gm37223	ENSMUST00000194453	lincRNA		1	1	184382687	411
ENSMUSG00000018656	protein_coding	Tcaf3	ENSMUST00000134707	protein_coding		6	-1	42597692	960
ENSMUSG00000117738	processed_pseudogene	Cyp2c71-ps	ENSMUST00000237118	processed_pseudogene		19	1	39946400	325
ENSMUSG00000079657	protein_coding	Rab26	ENSMUST00000035797	protein_coding	principal2	17	-1	24533888	1575
ENSMUSG00000116336	protein_coding	Gm49425	ENSMUST00000230067	protein_coding	principal1	15	-1	101517261	985
ENSMUSG00000111800	lincRNA	Gm31557	ENSMUST00000213995	lincRNA		9	1	46666273	722
ENSMUSG00000055409	protein_coding	Nell1	ENSMUST00000154410	processed_transcript		7	1	50098310	758
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000073279	protein_coding		1	-1	192138040	3748
ENSMUSG00000111800	lincRNA	Gm31557	ENSMUST00000213825	lincRNA		9	1	46666313	973
ENSMUSG00000111800	lincRNA	Gm31557	ENSMUST00000216189	lincRNA		9	1	46671541	786
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000139547	nonsense_mediated_decay		9	-1	66593000	3662
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000136590	processed_transcript		2	1	180967267	2278
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000098613	protein_coding		9	-1	66593036	2797
ENSMUSG00000040666	protein_coding	Sh3bgr	ENSMUST00000233818	protein_coding	alternative2	16	1	96200671	863
ENSMUSG00000099398	protein_coding	Ms4a14	ENSMUST00000187467	protein_coding	principal1	19	-1	11314454	4065
ENSMUSG00000084234	protein_coding	4933405O20Rik	ENSMUST00000119710	protein_coding	principal1	7	1	50599190	1341
ENSMUSG00000044976	protein_coding	Wdr72	ENSMUST00000098564	processed_transcript		9	1	74110356	1561
ENSMUSG00000079657	protein_coding	Rab26	ENSMUST00000177441	retained_intron		17	-1	24533712	1658
ENSMUSG00000085265	antisense	Nell1os	ENSMUST00000134584	antisense		7	-1	50575884	489
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000192158	nonsense_mediated_decay		1	-1	192138031	3643
ENSMUSG00000044934	protein_coding	Zfp367	ENSMUST00000059817	protein_coding	principal2	13	-1	64153202	3532
ENSMUSG00000079657	protein_coding	Rab26	ENSMUST00000176025	retained_intron		17	-1	24529946	529
ENSMUSG00000028492	protein_coding	Saxo1	ENSMUST00000030216	protein_coding	principal1	4	-1	86558303	1892
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000034940	retained_intron		9	-1	66592958	2405
ENSMUSG00000046470	protein_coding	Sox18	ENSMUST00000054491	protein_coding	principal1	2	-1	181671640	1620
ENSMUSG00000079657	protein_coding	Rab26	ENSMUST00000176533	protein_coding	alternative2	17	-1	24534210	965
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000174387	protein_coding		9	-1	66593006	1901
ENSMUSG00000085265	antisense	Nell1os	ENSMUST00000152166	antisense		7	-1	50575971	410
ENSMUSG00000043243	protein_coding	Fam129c	ENSMUST00000124485	retained_intron		8	1	71597782	2834
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000192222	nonsense_mediated_decay		1	-1	192116346	892
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000132255	retained_intron		9	-1	66520339	573
ENSMUSG00000085265	antisense	Nell1os	ENSMUST00000136672	antisense		7	-1	50574106	491
ENSMUSG00000043243	protein_coding	Fam129c	ENSMUST00000141594	processed_transcript		8	1	71599177	677
ENSMUSG00000111144	lincRNA	Gm48193	ENSMUST00000214934	lincRNA		9	-1	63082973	248
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000150840	retained_intron		9	-1	66520820	565
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000192866	protein_coding	alternative2	1	-1	192138062	1844
ENSMUSG00000063550	protein_coding	Nup98	ENSMUST00000210682	protein_coding	principal1	7	-1	102210176	6694
ENSMUSG00000115989	processed_pseudogene	Gm49533	ENSMUST00000229672	processed_pseudogene		16	-1	7709066	331
ENSMUSG00000111297	processed_pseudogene	Gm6082	ENSMUST00000215204	processed_pseudogene		9	1	63117201	454
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000154476	retained_intron		9	-1	66530402	625
ENSMUSG00000116450	lincRNA	Gm49534	ENSMUST00000230593	lincRNA		16	1	7870102	3886
ENSMUSG00000043243	protein_coding	Fam129c	ENSMUST00000132891	retained_intron		8	1	71599911	536
ENSMUSG00000081933	processed_pseudogene	Gm14767	ENSMUST00000121559	processed_pseudogene		X	1	85716438	586
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000194750	protein_coding		1	-1	192124285	842
ENSMUSG00000042213	protein_coding	Zfand4	ENSMUST00000222819	nonsense_mediated_decay		6	1	116264222	3087
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000124694	processed_transcript		9	-1	66540351	588
ENSMUSG00000043243	protein_coding	Fam129c	ENSMUST00000125525	retained_intron		8	1	71602267	507
ENSMUSG00000029538	protein_coding	Srsf9	ENSMUST00000031513	protein_coding	principal1	5	1	115327177	1162
ENSMUSG00000035142	protein_coding	Nubpl	ENSMUST00000040090	protein_coding	principal1	12	1	52097737	2987
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000124519	retained_intron		9	-1	66566926	664
ENSMUSG00000043243	protein_coding	Fam129c	ENSMUST00000127285	retained_intron		8	1	71602351	1561
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000192491	protein_coding		1	-1	192138026	1623
ENSMUSG00000044934	protein_coding	Zfp367	ENSMUST00000152644	processed_transcript		13	-1	64152485	641
ENSMUSG00000032376	protein_coding	Usp3	ENSMUST00000139952	processed_transcript		9	-1	66576038	324
ENSMUSG00000102249	TEC	4930423C22Rik	ENSMUST00000193863	TEC		12	-1	82961157	1311
ENSMUSG00000044934	protein_coding	Zfp367	ENSMUST00000134136	processed_transcript		13	-1	64150214	562
ENSMUSG00000028492	protein_coding	Saxo1	ENSMUST00000139694	processed_transcript		4	-1	86558328	659
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000192128	protein_coding	principal3	1	-1	192137927	1578
ENSMUSG00000103387	TEC	1700030I03Rik	ENSMUST00000192978	TEC		12	1	83122214	942
ENSMUSG00000044934	protein_coding	Zfp367	ENSMUST00000117241	protein_coding	alternative2	13	-1	64153202	2753
ENSMUSG00000086387	antisense	Gm15563	ENSMUST00000124953	antisense		9	1	66572001	410
ENSMUSG00000035142	protein_coding	Nubpl	ENSMUST00000159708	retained_intron		12	1	52097756	1308
ENSMUSG00000043243	protein_coding	Fam129c	ENSMUST00000126559	nonsense_mediated_decay		8	1	71604744	348
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000193664	retained_intron		1	-1	192108851	2666
ENSMUSG00000042213	protein_coding	Zfand4	ENSMUST00000220845	nonsense_mediated_decay		6	1	116264245	1163
ENSMUSG00000028492	protein_coding	Saxo1	ENSMUST00000151481	processed_transcript		4	-1	86539117	1716
ENSMUSG00000102029	antisense	Gm29530	ENSMUST00000187556	antisense		12	-1	83098874	1956
ENSMUSG00000043243	protein_coding	Fam129c	ENSMUST00000125339	protein_coding		8	1	71604961	696
ENSMUSG00000063550	protein_coding	Nup98	ENSMUST00000070165	protein_coding		7	-1	102210120	4052
ENSMUSG00000114165	TEC	Gm47513	ENSMUST00000221450	TEC		13	1	64152581	2016
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000194362	retained_intron		1	-1	192131257	3412
ENSMUSG00000109015	TEC	Gm31024	ENSMUST00000207600	TEC		7	-1	28169627	2353
ENSMUSG00000044294	protein_coding	Krt84	ENSMUST00000023720	protein_coding	principal1	15	-1	101532820	2570
ENSMUSG00000032624	protein_coding	Eml4	ENSMUST00000096766	protein_coding	alternative2	17	1	83350931	5441
ENSMUSG00000028492	protein_coding	Saxo1	ENSMUST00000133793	processed_transcript		4	-1	86557995	345
ENSMUSG00000037526	protein_coding	Atg14	ENSMUST00000226299	protein_coding	principal1	14	-1	47570649	3729
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000193144	protein_coding		1	-1	192137660	345
ENSMUSG00000036707	protein_coding	Cab39	ENSMUST00000113360	protein_coding	principal1	1	1	85793441	3805
ENSMUSG00000100890	antisense	1700085C21Rik	ENSMUST00000187123	antisense		12	-1	82939155	1082
ENSMUSG00000037526	protein_coding	Atg14	ENSMUST00000227971	retained_intron		14	-1	47560639	496
ENSMUSG00000115871	lincRNA	Gm49507	ENSMUST00000231018	lincRNA		16	-1	3507196	2947
ENSMUSG00000068085	protein_coding	Cyp2d11	ENSMUST00000170255	protein_coding	principal1	15	-1	82394022	1590
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000046717	protein_coding	alternative2	2	1	119897228	11982
ENSMUSG00000104380	TEC	4933436F18Rik	ENSMUST00000193468	TEC		12	-1	83122116	802
ENSMUSG00000044294	protein_coding	Krt84	ENSMUST00000229893	retained_intron		15	-1	101530341	421
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000194493	retained_intron		1	-1	192138035	3589
ENSMUSG00000036707	protein_coding	Cab39	ENSMUST00000126962	protein_coding		1	1	85793541	580
ENSMUSG00000116455	lincRNA	Gm35974	ENSMUST00000229453	lincRNA		16	1	3468460	2343
ENSMUSG00000037526	protein_coding	Atg14	ENSMUST00000228784	protein_coding		14	-1	47568404	376
ENSMUSG00000063550	protein_coding	Nup98	ENSMUST00000211235	protein_coding		7	-1	102210142	3748
ENSMUSG00000036707	protein_coding	Cab39	ENSMUST00000130754	protein_coding		1	1	85794468	437
ENSMUSG00000029538	protein_coding	Srsf9	ENSMUST00000209604	nonsense_mediated_decay		5	1	115327395	1392
ENSMUSG00000116528	processed_pseudogene	Gm49508	ENSMUST00000229675	processed_pseudogene		16	1	3521772	328
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000194395	processed_transcript		1	-1	192138010	629
ENSMUSG00000036707	protein_coding	Cab39	ENSMUST00000097666	protein_coding	principal1	1	1	85794511	2369
ENSMUSG00000032624	protein_coding	Eml4	ENSMUST00000049503	protein_coding	principal3	17	1	83350982	5052
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000141776	retained_intron		2	1	119897232	2763
ENSMUSG00000116300	processed_pseudogene	Gm49509	ENSMUST00000229645	processed_pseudogene		16	1	3531012	280
ENSMUSG00000063550	protein_coding	Nup98	ENSMUST00000211005	protein_coding		7	-1	102209867	3961
ENSMUSG00000037526	protein_coding	Atg14	ENSMUST00000042988	protein_coding	principal1	14	-1	47568434	3450
ENSMUSG00000037395	protein_coding	Rcor3	ENSMUST00000193322	processed_transcript		1	-1	192138024	479
ENSMUSG00000036707	protein_coding	Cab39	ENSMUST00000187623	retained_intron		1	1	85843080	2991
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000108860	protein_coding	alternative2	2	1	180967277	2326
ENSMUSG00000115571	processed_pseudogene	Gm6616	ENSMUST00000228790	processed_pseudogene		14	1	47569526	249
ENSMUSG00000102755	TEC	Gm37055	ENSMUST00000191866	TEC		1	1	192136689	133
ENSMUSG00000029538	protein_coding	Srsf9	ENSMUST00000144000	processed_transcript		5	1	115327656	901
ENSMUSG00000063550	protein_coding	Nup98	ENSMUST00000211022	protein_coding		7	-1	102210150	3132
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000129405	processed_transcript		2	1	119897248	3317
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000132627	retained_intron		2	1	180967279	632
ENSMUSG00000029538	protein_coding	Srsf9	ENSMUST00000142318	processed_transcript		5	1	115327659	1237
ENSMUSG00000036810	protein_coding	Cnep1r1	ENSMUST00000095214	protein_coding	principal1	8	1	88118769	1731
ENSMUSG00000097089	antisense	Gm26879	ENSMUST00000181127	antisense		1	1	192092355	1176
ENSMUSG00000115823	antisense	Gm49004	ENSMUST00000228568	antisense		14	1	47541980	538
ENSMUSG00000029538	protein_coding	Srsf9	ENSMUST00000149510	protein_coding		5	1	115330578	767
ENSMUSG00000063550	protein_coding	Nup98	ENSMUST00000211764	protein_coding		7	-1	102183565	689
ENSMUSG00000052922	protein_coding	Bpi	ENSMUST00000109499	protein_coding	alternative2	2	1	158258094	1778
ENSMUSG00000103653	processed_pseudogene	Gstp-ps	ENSMUST00000195526	processed_pseudogene		1	-1	192074450	631
ENSMUSG00000071311	protein_coding	Gpr31b	ENSMUST00000091648	protein_coding	principal1	17	-1	13052296	1283
ENSMUSG00000103180	processed_pseudogene	Gm37089	ENSMUST00000195616	processed_pseudogene		1	1	155766146	129
ENSMUSG00000050875	protein_coding	Minar2	ENSMUST00000117064	nonsense_mediated_decay		18	1	59062248	2057
ENSMUSG00000036810	protein_coding	Cnep1r1	ENSMUST00000127490	nonsense_mediated_decay		8	1	88118787	1643
ENSMUSG00000052922	protein_coding	Bpi	ENSMUST00000109500	protein_coding	alternative2	2	1	158258094	1911
ENSMUSG00000032624	protein_coding	Eml4	ENSMUST00000112363	protein_coding	alternative2	17	1	83350991	5081
ENSMUSG00000081255	processed_pseudogene	Gm5380	ENSMUST00000119296	processed_pseudogene		X	1	13302285	2136
ENSMUSG00000026637	protein_coding	Traf5	ENSMUST00000194408	retained_intron		1	-1	191998618	1414
ENSMUSG00000036810	protein_coding	Cnep1r1	ENSMUST00000121097	protein_coding		8	1	88118800	2209
ENSMUSG00000080914	processed_pseudogene	Gm7129	ENSMUST00000117402	processed_pseudogene		X	-1	13327019	997
ENSMUSG00000063550	protein_coding	Nup98	ENSMUST00000209242	retained_intron		7	-1	102195004	3198
ENSMUSG00000026637	protein_coding	Traf5	ENSMUST00000192628	protein_coding		1	-1	191999970	976
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000156510	protein_coding		2	1	119897305	6995
ENSMUSG00000032624	protein_coding	Eml4	ENSMUST00000234460	protein_coding	alternative2	17	1	83350993	5286
ENSMUSG00000099775	unprocessed_pseudogene	Gm5960	ENSMUST00000188483	unprocessed_pseudogene		15	1	75071112	406
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000108859	protein_coding	alternative2	2	1	180967300	2639
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000150742	retained_intron		2	1	119921676	825
ENSMUSG00000032624	protein_coding	Eml4	ENSMUST00000234584	protein_coding	alternative2	17	1	83351215	2934
ENSMUSG00000042213	protein_coding	Zfand4	ENSMUST00000036503	protein_coding	principal5	6	1	116264263	3123
ENSMUSG00000067813	protein_coding	Xkr9	ENSMUST00000088542	protein_coding	principal1	1	1	13668771	1926
ENSMUSG00000080818	processed_pseudogene	Gm9434	ENSMUST00000118975	processed_pseudogene		X	-1	13378678	813
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000132054	processed_transcript		2	1	119935188	739
ENSMUSG00000036810	protein_coding	Cnep1r1	ENSMUST00000128290	retained_intron		8	1	88118800	1616
ENSMUSG00000063550	protein_coding	Nup98	ENSMUST00000211375	retained_intron		7	-1	102210145	2823
ENSMUSG00000042213	protein_coding	Zfand4	ENSMUST00000223495	protein_coding		6	1	116264265	1751
ENSMUSG00000036810	protein_coding	Cnep1r1	ENSMUST00000117775	protein_coding		8	1	88118807	728
ENSMUSG00000028457	protein_coding	Atp8b5	ENSMUST00000056010	retained_intron		4	1	43267159	1568
ENSMUSG00000042213	protein_coding	Zfand4	ENSMUST00000222494	nonsense_mediated_decay		6	1	116266532	2790
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000156074	processed_transcript		2	1	119935357	864
ENSMUSG00000116007	processed_pseudogene	Gm4116	ENSMUST00000230933	processed_pseudogene		16	1	3534391	435
ENSMUSG00000036810	protein_coding	Cnep1r1	ENSMUST00000131891	processed_transcript		8	1	88118778	528
ENSMUSG00000052922	protein_coding	Bpi	ENSMUST00000065039	protein_coding	principal2	2	1	158258094	1926
ENSMUSG00000032624	protein_coding	Eml4	ENSMUST00000235121	retained_intron		17	1	83456301	3814
ENSMUSG00000042213	protein_coding	Zfand4	ENSMUST00000221239	processed_transcript		6	1	116273579	708
ENSMUSG00000028132	protein_coding	Tlcd4	ENSMUST00000135818	protein_coding	alternative2	3	-1	121283098	1336
ENSMUSG00000026637	protein_coding	Traf5	ENSMUST00000195815	protein_coding		1	-1	192059162	414
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000152148	processed_transcript		2	1	119935452	739
ENSMUSG00000049548	protein_coding	Krt82	ENSMUST00000023713	protein_coding	principal1	15	-1	101550667	2110
ENSMUSG00000042213	protein_coding	Zfand4	ENSMUST00000222144	processed_transcript		6	1	116284773	374
ENSMUSG00000087523	lincRNA	Gm12319	ENSMUST00000131642	lincRNA		11	-1	70656493	357
ENSMUSG00000075113	protein_coding	Olfr1209	ENSMUST00000213136	protein_coding	principal1	2	-1	88915157	5611
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000185115	protein_coding	alternative2	2	1	180971040	1393
ENSMUSG00000026637	protein_coding	Traf5	ENSMUST00000193355	retained_intron		1	-1	192059162	2084
ENSMUSG00000081357	unprocessed_pseudogene	Xlr4e-ps	ENSMUST00000122102	unprocessed_pseudogene		X	1	74944963	648
ENSMUSG00000075113	protein_coding	Olfr1209	ENSMUST00000213240	processed_transcript		2	-1	88915091	4960
ENSMUSG00000062760	protein_coding	Shisal1	ENSMUST00000080751	protein_coding	alternative1	15	-1	84447097	5917
ENSMUSG00000042213	protein_coding	Zfand4	ENSMUST00000221069	protein_coding		6	1	116286553	501
ENSMUSG00000062760	protein_coding	Shisal1	ENSMUST00000189248	protein_coding		15	-1	84446545	5296
ENSMUSG00000106367	lincRNA	Gm34078	ENSMUST00000198202	lincRNA		3	-1	144135754	744
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000184394	protein_coding	alternative2	2	1	180971055	1209
ENSMUSG00000075113	protein_coding	Olfr1209	ENSMUST00000099809	protein_coding	principal1	2	-1	88910391	933
ENSMUSG00000083981	unprocessed_pseudogene	Gm15363	ENSMUST00000118897	unprocessed_pseudogene		X	1	74958531	631
ENSMUSG00000042213	protein_coding	Zfand4	ENSMUST00000221824	retained_intron		6	1	116315068	889
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000138851	processed_transcript		2	1	119941251	1264
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000138706	retained_intron		2	1	180973486	605
ENSMUSG00000026637	protein_coding	Traf5	ENSMUST00000085573	protein_coding	principal1	1	-1	192092559	1964
ENSMUSG00000051228	protein_coding	Nyx	ENSMUST00000050434	protein_coding	principal1	X	1	13466110	5183
ENSMUSG00000028132	protein_coding	Tlcd4	ENSMUST00000128909	protein_coding	principal2	3	-1	121263314	6696
ENSMUSG00000112115	processed_pseudogene	Gm21027	ENSMUST00000219300	processed_pseudogene		10	-1	86556182	1236
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000151074	processed_transcript		2	1	119941755	649
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000150507	retained_intron		2	1	180973503	922
ENSMUSG00000042213	protein_coding	Zfand4	ENSMUST00000112900	protein_coding	alternative2	6	1	116264222	3220
ENSMUSG00000062760	protein_coding	Shisal1	ENSMUST00000189994	protein_coding		15	-1	84446610	754
ENSMUSG00000097316	antisense	Gm10516	ENSMUST00000180598	antisense		1	1	192136896	2615
ENSMUSG00000112207	processed_pseudogene	Gm48448	ENSMUST00000220343	processed_pseudogene		10	1	86569933	1397
ENSMUSG00000062760	protein_coding	Shisal1	ENSMUST00000186527	protein_coding		15	-1	84443697	404
ENSMUSG00000097316	antisense	Gm10516	ENSMUST00000195083	antisense		1	1	192137345	361
ENSMUSG00000028849	protein_coding	Map7d1	ENSMUST00000125981	protein_coding		4	-1	126240111	2363
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000122889	processed_transcript		2	1	119958314	2110
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000134519	retained_intron		2	1	180973831	588
ENSMUSG00000082241	processed_pseudogene	Gng5-ps	ENSMUST00000120931	processed_pseudogene		16	1	22295027	205
ENSMUSG00000118517	processed_pseudogene	AL772407.1	ENSMUST00000239054	processed_pseudogene		2	-1	63411266	496
ENSMUSG00000099452	lincRNA	Gm28502	ENSMUST00000189781	lincRNA		15	-1	75079094	476
ENSMUSG00000028132	protein_coding	Tlcd4	ENSMUST00000029777	protein_coding	principal2	3	-1	121263340	6248
ENSMUSG00000092309	antisense	4930518C09Rik	ENSMUST00000172700	antisense		5	-1	48005707	478
ENSMUSG00000027575	protein_coding	Arfgap1	ENSMUST00000148908	processed_transcript		2	1	180980349	479
ENSMUSG00000044976	protein_coding	Wdr72	ENSMUST00000055879	protein_coding	principal2	9	1	74110356	5196
ENSMUSG00000112579	processed_pseudogene	Gm48450	ENSMUST00000217862	processed_pseudogene		10	1	86571763	1204
ENSMUSG00000104993	processed_pseudogene	Gm43510	ENSMUST00000197922	processed_pseudogene		5	-1	100592756	353
ENSMUSG00000062760	protein_coding	Shisal1	ENSMUST00000239449	protein_coding	principal2	15	-1	84447097	5915
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000131396	retained_intron		2	1	119960405	985
ENSMUSG00000105502	TEC	Gm42536	ENSMUST00000197562	TEC		5	1	48127084	1613
ENSMUSG00000072878	protein_coding	1700123L14Rik	ENSMUST00000090061	protein_coding	principal1	6	-1	96166243	1747
ENSMUSG00000028132	protein_coding	Tlcd4	ENSMUST00000155309	protein_coding	principal2	3	-1	121252863	2230
ENSMUSG00000044976	protein_coding	Wdr72	ENSMUST00000215440	protein_coding	alternative2	9	1	74110356	5160
ENSMUSG00000092559	sense_intronic	Gm20475	ENSMUST00000174884	sense_intronic		5	1	48005784	263
ENSMUSG00000111558	processed_pseudogene	Gm18891	ENSMUST00000216734	processed_pseudogene		9	1	25349498	1087
ENSMUSG00000116857	unprocessed_pseudogene	Gm49582	ENSMUST00000231661	unprocessed_pseudogene		16	1	22296138	912
ENSMUSG00000028132	protein_coding	Tlcd4	ENSMUST00000137234	protein_coding		3	-1	121283098	719
ENSMUSG00000069439	processed_pseudogene	Gm8444	ENSMUST00000092020	processed_pseudogene		15	-1	81843713	368
ENSMUSG00000105086	TEC	Gm42534	ENSMUST00000196063	TEC		5	1	48279667	1754
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000187285	protein_coding	alternative2	1	1	133181321	5040
ENSMUSG00000081597	processed_pseudogene	Gm14506	ENSMUST00000121165	processed_pseudogene		X	-1	13491033	536
ENSMUSG00000055745	protein_coding	Rtl6	ENSMUST00000069476	protein_coding	principal1	15	-1	84557823	4426
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000079934	protein_coding	alternative2	2	1	119897228	13304
ENSMUSG00000044976	protein_coding	Wdr72	ENSMUST00000184725	processed_transcript		9	1	74110404	1369
ENSMUSG00000112562	processed_pseudogene	Gm48451	ENSMUST00000218152	processed_pseudogene		10	1	86573044	1204
ENSMUSG00000028132	protein_coding	Tlcd4	ENSMUST00000200402	retained_intron		3	-1	121231533	386
ENSMUSG00000037993	protein_coding	Dhx38	ENSMUST00000042601	protein_coding	principal1	8	-1	109565861	4463
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000110774	protein_coding	principal3	2	1	119897228	13931
ENSMUSG00000071753	lincRNA	Cdr1os	ENSMUST00000232283	lincRNA		X	1	61116378	797
ENSMUSG00000033943	protein_coding	Mga	ENSMUST00000110773	protein_coding	alternative2	2	1	119897228	13577
ENSMUSG00000112325	processed_pseudogene	Gm48454	ENSMUST00000218976	processed_pseudogene		10	1	86574323	1206
ENSMUSG00000106214	TEC	Gm43426	ENSMUST00000197287	TEC		5	1	48058051	2597
ENSMUSG00000028132	protein_coding	Tlcd4	ENSMUST00000123427	processed_transcript		3	-1	121282995	399
ENSMUSG00000071753	lincRNA	Cdr1os	ENSMUST00000144853	lincRNA		X	1	61116378	1885
ENSMUSG00000116409	lincRNA	Gm34095	ENSMUST00000229199	lincRNA		15	-1	84577117	585
ENSMUSG00000105184	TEC	Gm42537	ENSMUST00000198260	TEC		5	1	48211672	2574
ENSMUSG00000037993	protein_coding	Dhx38	ENSMUST00000212667	retained_intron		8	-1	109552124	657
ENSMUSG00000112268	processed_pseudogene	Gm48460	ENSMUST00000218562	processed_pseudogene		10	1	86575624	226
ENSMUSG00000044976	protein_coding	Wdr72	ENSMUST00000149439	processed_transcript		9	1	74274134	1928
ENSMUSG00000028132	protein_coding	Tlcd4	ENSMUST00000151058	processed_transcript		3	-1	121283002	446
ENSMUSG00000031539	protein_coding	Ap3m2	ENSMUST00000163739	protein_coding	principal1	8	-1	22805604	3417
ENSMUSG00000059187	protein_coding	Tafa1	ENSMUST00000122120	protein_coding	principal1	6	1	96113154	3252
ENSMUSG00000098313	processed_pseudogene	Nr1h2-ps	ENSMUST00000183844	processed_pseudogene		9	-1	74365063	478
ENSMUSG00000112735	processed_pseudogene	Gm46191	ENSMUST00000218899	processed_pseudogene		10	1	86593156	433
ENSMUSG00000102432	processed_transcript	Gm29856	ENSMUST00000191905	processed_transcript		1	1	177458966	1257
ENSMUSG00000079559	protein_coding	Colca2	ENSMUST00000215038	protein_coding		9	-1	51278554	1254
ENSMUSG00000079186	protein_coding	Gzmc	ENSMUST00000015585	protein_coding	principal1	14	-1	56234656	894
ENSMUSG00000101526	lincRNA	Gm28622	ENSMUST00000189842	lincRNA		9	-1	74561378	507
ENSMUSG00000059187	protein_coding	Tafa1	ENSMUST00000075080	protein_coding	principal1	6	1	96115311	2411
ENSMUSG00000102432	processed_transcript	Gm29856	ENSMUST00000192282	processed_transcript		1	1	177460182	455
ENSMUSG00000079559	protein_coding	Colca2	ENSMUST00000239415	protein_coding	principal1	9	-1	51279651	1124
ENSMUSG00000098748	processed_pseudogene	Gm27189	ENSMUST00000184119	processed_pseudogene		9	1	74568238	190
ENSMUSG00000044820	protein_coding	AY074887	ENSMUST00000054018	protein_coding	principal1	9	-1	54950998	769
ENSMUSG00000031807	protein_coding	Pgls	ENSMUST00000034264	protein_coding	principal1	8	1	71592176	893
ENSMUSG00000079559	protein_coding	Colca2	ENSMUST00000114427	protein_coding		9	-1	51278554	1263
ENSMUSG00000031539	protein_coding	Ap3m2	ENSMUST00000210656	protein_coding	principal1	8	-1	22805622	3373
ENSMUSG00000103043	lincRNA	Gm37306	ENSMUST00000193447	lincRNA		1	1	177467378	1233
ENSMUSG00000078942	protein_coding	Naip6	ENSMUST00000118574	protein_coding	principal1	13	-1	100317674	6827
ENSMUSG00000097936	processed_pseudogene	Gm4819	ENSMUST00000182170	processed_pseudogene		14	1	56250069	1009
ENSMUSG00000059187	protein_coding	Tafa1	ENSMUST00000129844	processed_transcript		6	1	96114649	542
ENSMUSG00000075112	protein_coding	Olfr1211	ENSMUST00000213412	protein_coding	principal1	2	-1	88938111	4173
ENSMUSG00000048699	protein_coding	Krt90	ENSMUST00000023714	protein_coding	principal1	15	-1	101562950	2534
ENSMUSG00000060726	protein_coding	Tmsb15a	ENSMUST00000113154	protein_coding		X	-1	135725261	544
ENSMUSG00000102885	lincRNA	Gm37280	ENSMUST00000194583	lincRNA		1	-1	177594522	375
ENSMUSG00000098272	processed_pseudogene	Gm27233	ENSMUST00000184030	processed_pseudogene		9	1	74709262	307
ENSMUSG00000113902	protein_coding	Ndufb1-ps	ENSMUST00000221422	protein_coding	principal1	12	-1	101976254	861
ENSMUSG00000075112	protein_coding	Olfr1211	ENSMUST00000215205	protein_coding	principal1	2	-1	88938105	4220
ENSMUSG00000078942	protein_coding	Naip6	ENSMUST00000042220	protein_coding	principal1	13	-1	100316616	6705
ENSMUSG00000044694	antisense	2010007H06Rik	ENSMUST00000186025	antisense		9	1	51278513	4934
ENSMUSG00000059187	protein_coding	Tafa1	ENSMUST00000125951	processed_transcript		6	1	96113242	684
ENSMUSG00000044694	antisense	2010007H06Rik	ENSMUST00000050829	antisense		9	1	51280295	626
ENSMUSG00000031807	protein_coding	Pgls	ENSMUST00000127626	nonsense_mediated_decay		8	1	71592184	1451
ENSMUSG00000113902	protein_coding	Ndufb1-ps	ENSMUST00000221227	protein_coding	principal1	12	-1	101977064	535
ENSMUSG00000097711	processed_pseudogene	Gm5523	ENSMUST00000180415	processed_pseudogene		1	-1	13786879	997
ENSMUSG00000031539	protein_coding	Ap3m2	ENSMUST00000210148	retained_intron		8	-1	22805622	1351
ENSMUSG00000075112	protein_coding	Olfr1211	ENSMUST00000141958	processed_transcript		2	-1	88937995	436
ENSMUSG00000031539	protein_coding	Ap3m2	ENSMUST00000210476	retained_intron		8	-1	22805602	1339
ENSMUSG00000075112	protein_coding	Olfr1211	ENSMUST00000099808	protein_coding	principal1	2	-1	88930313	936
ENSMUSG00000105028	processed_pseudogene	Gm18747	ENSMUST00000198129	processed_pseudogene		16	-1	19018702	648
ENSMUSG00000113902	protein_coding	Ndufb1-ps	ENSMUST00000221191	protein_coding	principal1	12	-1	101975927	511
ENSMUSG00000060726	protein_coding	Tmsb15a	ENSMUST00000073674	protein_coding	principal1	X	-1	135720673	299
ENSMUSG00000112010	processed_pseudogene	Gm48461	ENSMUST00000218018	processed_pseudogene		10	1	86600917	526
ENSMUSG00000051003	protein_coding	Olfr161	ENSMUST00000216259	protein_coding	principal1	16	1	3591042	7133
ENSMUSG00000031807	protein_coding	Pgls	ENSMUST00000123240	retained_intron		8	1	71592211	2688
ENSMUSG00000071753	lincRNA	Cdr1os	ENSMUST00000137153	lincRNA		X	1	61116386	2138
ENSMUSG00000113902	protein_coding	Ndufb1-ps	ENSMUST00000222608	processed_transcript		12	-1	101977068	799
ENSMUSG00000082873	processed_pseudogene	Gm15367	ENSMUST00000122398	processed_pseudogene		X	1	75010590	1016
ENSMUSG00000112638	processed_pseudogene	Gm48463	ENSMUST00000219676	processed_pseudogene		10	1	86601568	178
ENSMUSG00000031807	protein_coding	Pgls	ENSMUST00000138742	protein_coding		8	1	71592237	584
ENSMUSG00000112834	processed_pseudogene	Gm48464	ENSMUST00000219346	processed_pseudogene		10	1	86601781	1147
ENSMUSG00000051003	protein_coding	Olfr161	ENSMUST00000061541	protein_coding	principal1	16	1	3592398	942
ENSMUSG00000084330	unprocessed_pseudogene	Gm15019	ENSMUST00000120148	unprocessed_pseudogene		X	1	135726998	434
ENSMUSG00000111998	processed_pseudogene	Gm48465	ENSMUST00000219908	processed_pseudogene		10	1	86603008	1195
ENSMUSG00000071753	lincRNA	Cdr1os	ENSMUST00000140023	lincRNA		X	1	61116386	475
ENSMUSG00000071753	lincRNA	Cdr1os	ENSMUST00000125930	lincRNA		X	1	61116386	864
ENSMUSG00000112078	processed_pseudogene	Gm48466	ENSMUST00000219709	processed_pseudogene		10	1	86604292	472
ENSMUSG00000102166	TEC	Gm36947	ENSMUST00000194709	TEC		1	-1	13849119	2249
ENSMUSG00000031807	protein_coding	Pgls	ENSMUST00000143441	protein_coding		8	1	71592291	1062
ENSMUSG00000031723	protein_coding	Txnl4b	ENSMUST00000034159	protein_coding	principal1	8	1	109565892	1890
ENSMUSG00000071753	lincRNA	Cdr1os	ENSMUST00000232525	lincRNA		X	1	61116386	19658
ENSMUSG00000071753	lincRNA	Cdr1os	ENSMUST00000231449	lincRNA		X	1	61116386	3354
ENSMUSG00000068922	protein_coding	Msto1	ENSMUST00000107494	protein_coding		3	-1	88913931	2093
ENSMUSG00000071753	lincRNA	Cdr1os	ENSMUST00000232057	lincRNA		X	1	61181550	477
ENSMUSG00000108646	unprocessed_pseudogene	Olfr162-ps1	ENSMUST00000206015	unprocessed_pseudogene		16	1	3601925	934
ENSMUSG00000106198	lincRNA	Gm42504	ENSMUST00000198312	lincRNA		5	-1	143397457	525
ENSMUSG00000048226	protein_coding	Olfr1212	ENSMUST00000215781	protein_coding	principal1	2	1	88953969	3636
ENSMUSG00000093662	lincRNA	Gm20649	ENSMUST00000160950	lincRNA		9	1	74848463	2740
ENSMUSG00000071753	lincRNA	Cdr1os	ENSMUST00000096426	lincRNA		X	1	61116398	1483
ENSMUSG00000104209	TEC	Gm37400	ENSMUST00000193148	TEC		1	-1	14112819	3605
ENSMUSG00000045345	TEC	9530056K15Rik	ENSMUST00000197918	TEC		5	-1	143399563	2316
ENSMUSG00000118608	transcribed_unprocessed_pseudogene	Gm4988	ENSMUST00000232598	processed_transcript		X	1	61288188	1890
ENSMUSG00000048226	protein_coding	Olfr1212	ENSMUST00000055895	protein_coding	principal1	2	1	88958468	936
ENSMUSG00000031723	protein_coding	Txnl4b	ENSMUST00000178445	protein_coding	principal1	8	1	109568888	830
ENSMUSG00000045345	TEC	9530056K15Rik	ENSMUST00000061947	pseudogene		5	-1	143399563	2315
ENSMUSG00000116075	antisense	Gm49476	ENSMUST00000230781	antisense		15	1	81857741	289
ENSMUSG00000118608	transcribed_unprocessed_pseudogene	Gm4988	ENSMUST00000239181	transcribed_unprocessed_pseudogene		X	1	61290803	1314
ENSMUSG00000050875	protein_coding	Minar2	ENSMUST00000165666	protein_coding	principal2	18	1	59062282	1911
ENSMUSG00000108336	unprocessed_pseudogene	Olfr163-ps1	ENSMUST00000205891	unprocessed_pseudogene		16	1	3617852	940
ENSMUSG00000112565	processed_pseudogene	Gm48473	ENSMUST00000218085	processed_pseudogene		10	-1	86620927	277
ENSMUSG00000090546	protein_coding	Cdr1	ENSMUST00000166381	protein_coding	principal1	X	-1	61185558	1554
ENSMUSG00000112699	processed_pseudogene	Gm48474	ENSMUST00000219556	processed_pseudogene		10	-1	86622133	1159
ENSMUSG00000118529	processed_pseudogene	AC140982.1	ENSMUST00000238802	processed_pseudogene		16	-1	3636960	644
ENSMUSG00000112359	processed_pseudogene	Gm48475	ENSMUST00000220198	processed_pseudogene		10	-1	86623999	1391
ENSMUSG00000118604	processed_transcript	BX322656.1	ENSMUST00000232361	processed_transcript		X	1	61116378	2536
ENSMUSG00000099146	antisense	0610031O16Rik	ENSMUST00000185122	antisense		3	-1	138239663	825
ENSMUSG00000112282	processed_pseudogene	Gm19989	ENSMUST00000219347	processed_pseudogene		10	1	86637139	1255
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000038295	protein_coding	principal3	1	1	133246106	7388
ENSMUSG00000099146	antisense	0610031O16Rik	ENSMUST00000183783	antisense		3	-1	138239663	396
ENSMUSG00000099146	antisense	0610031O16Rik	ENSMUST00000184166	antisense		3	-1	138239679	697
ENSMUSG00000043013	protein_coding	Onecut1	ENSMUST00000056006	protein_coding	principal1	9	1	74861921	3957
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000239123	protein_coding		1	1	133256542	871
ENSMUSG00000048546	protein_coding	Tob2	ENSMUST00000050467	protein_coding	principal1	15	-1	81858485	4151
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000212142	retained_intron		1	1	133256542	1712
ENSMUSG00000048546	protein_coding	Tob2	ENSMUST00000231000	protein_coding		15	-1	81858522	615
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000186917	protein_coding	alternative2	1	1	133259009	4820
ENSMUSG00000043013	protein_coding	Onecut1	ENSMUST00000160499	processed_transcript		9	1	74866484	1211
ENSMUSG00000068922	protein_coding	Msto1	ENSMUST00000137243	retained_intron		3	-1	88912074	2636
ENSMUSG00000099146	antisense	0610031O16Rik	ENSMUST00000185046	antisense		3	-1	138240405	1429
ENSMUSG00000048546	protein_coding	Tob2	ENSMUST00000229500	retained_intron		15	-1	81858323	2590
ENSMUSG00000050875	protein_coding	Minar2	ENSMUST00000058633	protein_coding	alternative2	18	1	59062462	1862
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000190694	processed_transcript		1	1	133269456	452
ENSMUSG00000014599	protein_coding	Csf1	ENSMUST00000118593	protein_coding	alternative2	3	-1	107760236	3058
ENSMUSG00000048546	protein_coding	Tob2	ENSMUST00000230448	retained_intron		15	-1	81858796	858
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000190186	protein_coding		1	1	133272217	4492
ENSMUSG00000050875	protein_coding	Minar2	ENSMUST00000175897	protein_coding		18	1	59062466	437
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000187299	protein_coding		1	1	133274248	366
ENSMUSG00000027222	protein_coding	Pex16	ENSMUST00000155891	processed_transcript		2	1	92374676	1167
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000189598	protein_coding		1	1	133274254	524
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000085673	protein_coding	principal4	9	-1	58249786	4481
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000190884	retained_intron		1	1	133291750	2477
ENSMUSG00000050875	protein_coding	Minar2	ENSMUST00000118510	protein_coding	alternative2	18	1	59062494	785
ENSMUSG00000066477	processed_transcript	Gm16551	ENSMUST00000160979	lincRNA		9	1	74847983	3162
ENSMUSG00000029851	protein_coding	Tcaf2	ENSMUST00000031879	protein_coding	principal1	6	-1	42645254	4497
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000201602	protein_coding		12	1	82588292	426
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000190208	retained_intron		1	1	133297951	3002
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000114136	protein_coding	alternative2	9	-1	58249786	4343
ENSMUSG00000114470	protein_coding	Gm49395	ENSMUST00000224495	nonsense_mediated_decay		13	-1	115101624	645
ENSMUSG00000041757	protein_coding	Plekha6	ENSMUST00000105082	protein_coding	alternative2	1	1	133246097	7085
ENSMUSG00000050875	protein_coding	Minar2	ENSMUST00000154125	retained_intron		18	1	59062510	3680
ENSMUSG00000042390	protein_coding	Gatad2b	ENSMUST00000199754	protein_coding	principal1	3	1	90293178	7438
ENSMUSG00000066477	processed_transcript	Gm16551	ENSMUST00000161862	lincRNA		9	1	74848437	848
ENSMUSG00000032750	protein_coding	Gab3	ENSMUST00000114109	protein_coding		X	-1	75084905	2093
ENSMUSG00000114470	protein_coding	Gm49395	ENSMUST00000224997	protein_coding	principal1	13	-1	115101921	1057
ENSMUSG00000041781	protein_coding	Cpsf2	ENSMUST00000047357	protein_coding	principal1	12	1	101975988	5732
ENSMUSG00000036106	protein_coding	Prr5	ENSMUST00000171460	protein_coding	alternative2	15	1	84669620	1719
ENSMUSG00000050875	protein_coding	Minar2	ENSMUST00000175830	protein_coding	alternative2	18	1	59062511	731
ENSMUSG00000066477	processed_transcript	Gm16551	ENSMUST00000162089	retained_intron		9	1	74848503	685
ENSMUSG00000029851	protein_coding	Tcaf2	ENSMUST00000131341	retained_intron		6	-1	42629440	918
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000135310	protein_coding	alternative2	9	-1	58249733	4413
ENSMUSG00000032750	protein_coding	Gab3	ENSMUST00000127024	processed_transcript		X	-1	74969125	750
ENSMUSG00000114470	protein_coding	Gm49395	ENSMUST00000225486	processed_transcript		13	-1	115101709	535
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000126690	protein_coding		9	-1	58249665	4206
ENSMUSG00000066477	processed_transcript	Gm16551	ENSMUST00000160017	lincRNA		9	1	74848526	2579
ENSMUSG00000114470	protein_coding	Gm49395	ENSMUST00000225093	processed_transcript		13	-1	115101720	501
ENSMUSG00000045008	bidirectional_promoter_lncRNA	9030612E09Rik	ENSMUST00000238274	bidirectional_promoter_lncRNA		10	1	43174699	1864
ENSMUSG00000029064	protein_coding	Gnb1	ENSMUST00000105616	protein_coding	principal1	4	1	155491364	3088
ENSMUSG00000114255	antisense	Gm10734	ENSMUST00000225343	antisense		13	1	115089501	1269
ENSMUSG00000086743	processed_pseudogene	Hnrnpa1l2-ps	ENSMUST00000129154	processed_pseudogene		13	1	74864305	964
ENSMUSG00000045008	bidirectional_promoter_lncRNA	9030612E09Rik	ENSMUST00000053792	bidirectional_promoter_lncRNA		10	1	43174704	1859
ENSMUSG00000025422	protein_coding	Agap2	ENSMUST00000239120	protein_coding	alternative2	10	1	127075284	4076
ENSMUSG00000036106	protein_coding	Prr5	ENSMUST00000065499	protein_coding	principal3	15	1	84681002	1830
ENSMUSG00000066477	processed_transcript	Gm16551	ENSMUST00000160842	retained_intron		9	1	74848995	661
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000148628	retained_intron		9	-1	58233385	2573
ENSMUSG00000101596	lincRNA	Gm28182	ENSMUST00000188354	lincRNA		9	-1	74855385	2477
ENSMUSG00000112139	lincRNA	Gm47431	ENSMUST00000218097	lincRNA		12	-1	52448125	2409
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000124063	protein_coding		9	-1	58249660	427
ENSMUSG00000101693	antisense	Gm19461	ENSMUST00000191207	antisense		1	-1	133269808	2566
ENSMUSG00000101693	antisense	Gm19461	ENSMUST00000186799	antisense		1	-1	133257118	445
ENSMUSG00000068922	protein_coding	Msto1	ENSMUST00000126245	protein_coding	principal1	3	-1	88913999	1875
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000154572	processed_transcript		9	-1	58230127	655
ENSMUSG00000028849	protein_coding	Map7d1	ENSMUST00000122129	protein_coding	alternative2	4	-1	126256277	3249
ENSMUSG00000025422	protein_coding	Agap2	ENSMUST00000039259	protein_coding	principal2	10	1	127078907	5633
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000153820	protein_coding	alternative2	9	-1	58249786	2652
ENSMUSG00000111982	lincRNA	Gm35135	ENSMUST00000219885	lincRNA		12	-1	52480609	990
ENSMUSG00000101693	antisense	Gm19461	ENSMUST00000191132	antisense		1	-1	133254292	390
ENSMUSG00000025422	protein_coding	Agap2	ENSMUST00000217941	protein_coding	alternative2	10	1	127078907	5573
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000148301	nonsense_mediated_decay		9	-1	58249786	718
ENSMUSG00000014599	protein_coding	Csf1	ENSMUST00000014743	protein_coding	principal3	3	-1	107760469	4176
ENSMUSG00000101693	antisense	Gm19461	ENSMUST00000186027	antisense		1	-1	133256352	610
ENSMUSG00000042390	protein_coding	Gatad2b	ENSMUST00000200373	retained_intron		3	1	90293184	1937
ENSMUSG00000028849	protein_coding	Map7d1	ENSMUST00000061143	protein_coding	principal3	4	-1	126256283	3351
ENSMUSG00000029064	protein_coding	Gnb1	ENSMUST00000030940	protein_coding	principal1	4	1	155491370	3131
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000138775	retained_intron		9	-1	58233395	481
ENSMUSG00000101693	antisense	Gm19461	ENSMUST00000189590	antisense		1	-1	133258672	847
ENSMUSG00000067336	protein_coding	Bmpr2	ENSMUST00000087435	protein_coding	principal1	1	1	59763400	12899
ENSMUSG00000042390	protein_coding	Gatad2b	ENSMUST00000196212	retained_intron		3	1	90293361	3125
ENSMUSG00000029064	protein_coding	Gnb1	ENSMUST00000176411	protein_coding		4	1	155492909	500
ENSMUSG00000014599	protein_coding	Csf1	ENSMUST00000120654	protein_coding		3	-1	107750979	821
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000130459	nonsense_mediated_decay		9	-1	58249623	590
ENSMUSG00000090023	lincRNA	Gm16302	ENSMUST00000159268	lincRNA		9	1	14845613	428
ENSMUSG00000042390	protein_coding	Gatad2b	ENSMUST00000199607	protein_coding	principal1	3	1	90294083	2418
ENSMUSG00000067336	protein_coding	Bmpr2	ENSMUST00000190659	retained_intron		1	1	59850665	732
ENSMUSG00000036986	protein_coding	Pml	ENSMUST00000124982	protein_coding		9	-1	58249786	452
ENSMUSG00000014599	protein_coding	Csf1	ENSMUST00000120243	protein_coding	principal3	3	-1	107760242	2097
ENSMUSG00000067336	protein_coding	Bmpr2	ENSMUST00000186246	retained_intron		1	1	59851477	4719
ENSMUSG00000028849	protein_coding	Map7d1	ENSMUST00000106132	protein_coding	alternative2	4	-1	126256343	3195
ENSMUSG00000059658	processed_pseudogene	Gm16379	ENSMUST00000161469	processed_pseudogene		9	-1	14845712	348
ENSMUSG00000104052	TEC	Gm38125	ENSMUST00000194136	TEC		1	1	59801263	3438
ENSMUSG00000082905	processed_pseudogene	Gm7823	ENSMUST00000120761	processed_pseudogene		X	-1	133095562	1623
ENSMUSG00000054604	protein_coding	Cggbp1	ENSMUST00000067744	protein_coding	principal1	16	1	64851996	4425
ENSMUSG00000081326	unprocessed_pseudogene	Gm14417	ENSMUST00000120036	unprocessed_pseudogene		2	-1	176953323	1074
ENSMUSG00000078954	protein_coding	Arhgap8	ENSMUST00000167499	retained_intron		15	1	84720083	2446
ENSMUSG00000014599	protein_coding	Csf1	ENSMUST00000155557	retained_intron		3	-1	107760242	2160
ENSMUSG00000083858	processed_pseudogene	Gm14979	ENSMUST00000121561	processed_pseudogene		X	1	133210486	1035
ENSMUSG00000029064	protein_coding	Gnb1	ENSMUST00000177094	protein_coding		4	1	155522462	1058
ENSMUSG00000014599	protein_coding	Csf1	ENSMUST00000156820	protein_coding		3	-1	107750741	836
ENSMUSG00000042390	protein_coding	Gatad2b	ENSMUST00000205797	retained_intron		3	1	90341029	2443
ENSMUSG00000054604	protein_coding	Cggbp1	ENSMUST00000136532	retained_intron		16	1	64852702	760
ENSMUSG00000029064	protein_coding	Gnb1	ENSMUST00000175688	retained_intron		4	1	155522636	925
ENSMUSG00000042390	protein_coding	Gatad2b	ENSMUST00000197988	protein_coding		3	1	90341656	1815
ENSMUSG00000014599	protein_coding	Csf1	ENSMUST00000153114	protein_coding		3	-1	107760221	773
ENSMUSG00000048916	processed_pseudogene	Gm5540	ENSMUST00000131852	processed_pseudogene		3	1	65393337	1848
ENSMUSG00000042390	protein_coding	Gatad2b	ENSMUST00000206907	protein_coding		3	1	90351418	788
ENSMUSG00000078875	protein_coding	Gm14419	ENSMUST00000126358	protein_coding	principal1	2	1	177004553	1749
ENSMUSG00000029064	protein_coding	Gnb1	ENSMUST00000176637	protein_coding	principal1	4	1	155527453	2832
ENSMUSG00000110815	TEC	Gm47345	ENSMUST00000214791	TEC		9	-1	43998593	2123
ENSMUSG00000103513	TEC	Gm34780	ENSMUST00000193896	TEC		3	-1	65495035	949
ENSMUSG00000078875	protein_coding	Gm14419	ENSMUST00000108975	protein_coding		2	1	177000956	683
ENSMUSG00000078875	protein_coding	Gm14419	ENSMUST00000156844	protein_coding		2	1	177000977	752
ENSMUSG00000075324	protein_coding	Fign	ENSMUST00000131615	protein_coding	principal1	2	-1	64098012	9734
ENSMUSG00000028849	protein_coding	Map7d1	ENSMUST00000137382	retained_intron		4	-1	126233548	374
ENSMUSG00000078875	protein_coding	Gm14419	ENSMUST00000178182	protein_coding		2	1	177009681	192
ENSMUSG00000029064	protein_coding	Gnb1	ENSMUST00000175705	retained_intron		4	1	155542928	726
ENSMUSG00000111283	processed_transcript	E230034D01Rik	ENSMUST00000217357	lincRNA		9	1	43993984	1159
ENSMUSG00000028849	protein_coding	Map7d1	ENSMUST00000131579	retained_intron		4	-1	126234776	577
ENSMUSG00000097999	processed_pseudogene	Gm9061	ENSMUST00000182707	processed_pseudogene		16	1	64911273	1006
ENSMUSG00000068922	protein_coding	Msto1	ENSMUST00000147828	retained_intron		3	-1	88913903	3891
ENSMUSG00000083062	processed_pseudogene	Gm14980	ENSMUST00000121247	processed_pseudogene		X	-1	133407110	736
ENSMUSG00000042390	protein_coding	Gatad2b	ENSMUST00000049382	protein_coding	principal1	3	1	90341654	1906
ENSMUSG00000028457	protein_coding	Atp8b5	ENSMUST00000107942	protein_coding	principal1	4	1	43267170	4463
ENSMUSG00000111283	processed_transcript	E230034D01Rik	ENSMUST00000214440	lincRNA		9	1	43993988	1212
ENSMUSG00000029064	protein_coding	Gnb1	ENSMUST00000176308	retained_intron		4	1	155553224	812
ENSMUSG00000103880	processed_pseudogene	Gm37009	ENSMUST00000193297	processed_pseudogene		3	-1	65506637	361
ENSMUSG00000072763	protein_coding	5430403G16Rik	ENSMUST00000092720	protein_coding	principal1	5	-1	109691041	3341
ENSMUSG00000032750	protein_coding	Gab3	ENSMUST00000037374	protein_coding	principal2	X	-1	75084905	2153
ENSMUSG00000075324	protein_coding	Fign	ENSMUST00000102728	nonsense_mediated_decay		2	-1	64098038	3988
ENSMUSG00000111283	processed_transcript	E230034D01Rik	ENSMUST00000215430	retained_intron		9	1	43994040	1809
ENSMUSG00000108394	TEC	Gm45477	ENSMUST00000200213	TEC		3	1	90311518	5498
ENSMUSG00000055301	protein_coding	Adh7	ENSMUST00000090171	protein_coding	principal1	3	1	138217760	3432
ENSMUSG00000091198	processed_pseudogene	Gm5218	ENSMUST00000172270	processed_pseudogene		15	-1	81499545	465
ENSMUSG00000068922	protein_coding	Msto1	ENSMUST00000128988	retained_intron		3	-1	88913882	937
ENSMUSG00000111229	lincRNA	Gm39323	ENSMUST00000215913	lincRNA		9	-1	44041059	2942
ENSMUSG00000083317	unprocessed_pseudogene	Gm14402	ENSMUST00000122217	unprocessed_pseudogene		2	1	177032655	508
ENSMUSG00000116811	processed_pseudogene	Gm16385	ENSMUST00000232275	processed_pseudogene		16	-1	64919084	1102
ENSMUSG00000032750	protein_coding	Gab3	ENSMUST00000114104	protein_coding	alternative2	X	-1	75084757	1705
ENSMUSG00000075324	protein_coding	Fign	ENSMUST00000153538	processed_transcript		2	-1	64098010	662
ENSMUSG00000046865	protein_coding	Fbl	ENSMUST00000042405	protein_coding	principal1	7	1	28169710	1197
ENSMUSG00000083111	unprocessed_pseudogene	Gm14421	ENSMUST00000121755	unprocessed_pseudogene		2	-1	177056838	1958
ENSMUSG00000032750	protein_coding	Gab3	ENSMUST00000129495	processed_transcript		X	-1	75085458	1300
ENSMUSG00000075324	protein_coding	Fign	ENSMUST00000126042	processed_transcript		2	-1	64097988	600
ENSMUSG00000055301	protein_coding	Adh7	ENSMUST00000199865	retained_intron		3	1	138221471	470
ENSMUSG00000108689	TEC	Gm45354	ENSMUST00000199820	TEC		3	1	90335395	2557
ENSMUSG00000028457	protein_coding	Atp8b5	ENSMUST00000136262	nonsense_mediated_decay		4	1	43267185	670
ENSMUSG00000029064	protein_coding	Gnb1	ENSMUST00000165335	protein_coding	principal1	4	1	155491361	3143
ENSMUSG00000106835	transcribed_unprocessed_pseudogene	Gm43812	ENSMUST00000200976	processed_transcript		5	1	32550660	581
ENSMUSG00000103520	TEC	1110025M09Rik	ENSMUST00000192082	TEC		15	-1	81585028	855
ENSMUSG00000046865	protein_coding	Fbl	ENSMUST00000207956	retained_intron		7	1	28169722	2411
ENSMUSG00000105350	antisense	4930537H20Rik	ENSMUST00000200437	antisense		3	-1	90293983	1683
ENSMUSG00000106835	transcribed_unprocessed_pseudogene	Gm43812	ENSMUST00000202701	transcribed_unprocessed_pseudogene		5	1	32550664	581
ENSMUSG00000107497	processed_transcript	Gm44957	ENSMUST00000203361	retained_intron		6	-1	116337462	2230
ENSMUSG00000046865	protein_coding	Fbl	ENSMUST00000208967	protein_coding		7	1	28169767	297
ENSMUSG00000115559	processed_pseudogene	Gm49170	ENSMUST00000227138	processed_pseudogene		14	1	73974226	187
ENSMUSG00000055301	protein_coding	Adh7	ENSMUST00000196133	processed_transcript		3	1	138228051	502
ENSMUSG00000107497	processed_transcript	Gm44957	ENSMUST00000205137	bidirectional_promoter_lncRNA		6	-1	116337949	448
ENSMUSG00000085234	antisense	Gm15614	ENSMUST00000155976	antisense		5	-1	32651065	1537
ENSMUSG00000046865	protein_coding	Fbl	ENSMUST00000207397	retained_intron		7	1	28169770	482
ENSMUSG00000107197	TEC	Gm43312	ENSMUST00000201655	TEC		5	1	32459828	2466
ENSMUSG00000046865	protein_coding	Fbl	ENSMUST00000207384	retained_intron		7	1	28174872	559
ENSMUSG00000080753	processed_pseudogene	Gm15613	ENSMUST00000118396	processed_pseudogene		5	-1	32479885	326
ENSMUSG00000082023	processed_pseudogene	Gm14407	ENSMUST00000121260	processed_pseudogene		2	-1	177085802	447
ENSMUSG00000087702	lincRNA	Gm13575	ENSMUST00000142353	lincRNA		2	-1	64393860	1520
ENSMUSG00000078872	protein_coding	Gm14401	ENSMUST00000108968	protein_coding		2	1	177080265	247
ENSMUSG00000101925	antisense	Gm28156	ENSMUST00000187880	antisense		11	-1	101347939	1136
ENSMUSG00000082127	processed_pseudogene	Gm13577	ENSMUST00000121365	processed_pseudogene		2	-1	64474949	205
ENSMUSG00000046865	protein_coding	Fbl	ENSMUST00000208259	retained_intron		7	1	28174994	815
ENSMUSG00000078872	protein_coding	Gm14401	ENSMUST00000134614	protein_coding	principal1	2	1	177080256	973
ENSMUSG00000078872	protein_coding	Gm14401	ENSMUST00000108970	protein_coding	principal1	2	1	177074320	948
ENSMUSG00000078872	protein_coding	Gm14401	ENSMUST00000108969	processed_transcript		2	1	177080259	1222
ENSMUSG00000082377	unprocessed_pseudogene	Gm14415	ENSMUST00000118260	unprocessed_pseudogene		2	-1	177106488	1578
ENSMUSG00000027222	protein_coding	Pex16	ENSMUST00000028650	protein_coding	principal1	2	1	92375306	1392
ENSMUSG00000082765	unprocessed_pseudogene	Gm14411	ENSMUST00000121798	unprocessed_pseudogene		2	-1	177127709	914
ENSMUSG00000028457	protein_coding	Atp8b5	ENSMUST00000107937	nonsense_mediated_decay		4	1	43267185	4706
ENSMUSG00000027222	protein_coding	Pex16	ENSMUST00000154669	processed_transcript		2	1	92375493	852
ENSMUSG00000082724	unprocessed_pseudogene	Gm14416	ENSMUST00000118630	unprocessed_pseudogene		2	1	177138660	2308
ENSMUSG00000020689	protein_coding	Itgb3	ENSMUST00000021028	protein_coding	principal1	11	1	104608000	5784
ENSMUSG00000027222	protein_coding	Pex16	ENSMUST00000148386	processed_transcript		2	1	92375559	425
ENSMUSG00000028457	protein_coding	Atp8b5	ENSMUST00000102953	protein_coding		4	1	43267191	2609
ENSMUSG00000081590	unprocessed_pseudogene	Gm14413	ENSMUST00000122158	unprocessed_pseudogene		2	-1	177172870	408
ENSMUSG00000042284	protein_coding	Itga1	ENSMUST00000061673	protein_coding	principal1	13	-1	115101964	10967
ENSMUSG00000078870	protein_coding	Gm14410	ENSMUST00000133301	protein_coding	principal1	2	-1	177202829	1113
ENSMUSG00000034640	protein_coding	Tiparp	ENSMUST00000047906	protein_coding	principal1	3	1	65528410	4191
ENSMUSG00000078870	protein_coding	Gm14410	ENSMUST00000156269	processed_transcript		2	-1	177195761	685
ENSMUSG00000078870	protein_coding	Gm14410	ENSMUST00000108964	protein_coding		2	-1	177206421	912
ENSMUSG00000083817	unprocessed_pseudogene	Gm14400	ENSMUST00000117234	unprocessed_pseudogene		2	-1	177228963	2135
ENSMUSG00000034640	protein_coding	Tiparp	ENSMUST00000130705	protein_coding		3	1	65528460	827
ENSMUSG00000002043	protein_coding	Trappc6a	ENSMUST00000207730	retained_intron		7	1	19508395	435
ENSMUSG00000078869	protein_coding	Gm14409	ENSMUST00000108963	protein_coding	principal1	2	-1	177267036	1050
ENSMUSG00000034640	protein_coding	Tiparp	ENSMUST00000154094	processed_transcript		3	1	65546040	594
ENSMUSG00000078868	protein_coding	Gm14412	ENSMUST00000108959	protein_coding	principal1	2	-1	177324307	1581
ENSMUSG00000020689	protein_coding	Itgb3	ENSMUST00000127140	processed_transcript		11	1	104637389	4375
ENSMUSG00000012042	protein_coding	4930579F01Rik	ENSMUST00000012186	protein_coding		3	-1	138186673	1732
ENSMUSG00000019326	protein_coding	Aoc3	ENSMUST00000103105	protein_coding	principal1	11	1	101330605	4397
ENSMUSG00000002043	protein_coding	Trappc6a	ENSMUST00000136873	nonsense_mediated_decay		7	1	19508670	734
ENSMUSG00000012042	protein_coding	4930579F01Rik	ENSMUST00000199804	protein_coding	principal1	3	-1	138239663	1809
ENSMUSG00000072964	protein_coding	Bhlhb9	ENSMUST00000207433	retained_intron		X	1	135797594	4430
ENSMUSG00000002043	protein_coding	Trappc6a	ENSMUST00000147114	nonsense_mediated_decay		7	1	19508710	719
ENSMUSG00000045667	protein_coding	Smtnl2	ENSMUST00000108500	protein_coding	alternative2	11	-1	72411711	3572
ENSMUSG00000074580	transcribed_processed_pseudogene	4931440P22Rik	ENSMUST00000147424	processed_transcript		3	-1	65528184	2430
ENSMUSG00000019326	protein_coding	Aoc3	ENSMUST00000017316	protein_coding		11	1	101331069	1589
ENSMUSG00000074580	transcribed_processed_pseudogene	4931440P22Rik	ENSMUST00000194448	transcribed_processed_pseudogene		3	-1	65509164	474
ENSMUSG00000074580	transcribed_processed_pseudogene	4931440P22Rik	ENSMUST00000184377	processed_transcript		3	-1	65529371	744
ENSMUSG00000012042	protein_coding	4930579F01Rik	ENSMUST00000199293	protein_coding		3	-1	138186713	1598
ENSMUSG00000045667	protein_coding	Smtnl2	ENSMUST00000125807	processed_transcript		11	-1	72403108	415
ENSMUSG00000074580	transcribed_processed_pseudogene	4931440P22Rik	ENSMUST00000193051	processed_transcript		3	-1	65529213	1725
ENSMUSG00000045667	protein_coding	Smtnl2	ENSMUST00000143345	processed_transcript		11	-1	72402741	359
ENSMUSG00000074580	transcribed_processed_pseudogene	4931440P22Rik	ENSMUST00000099076	processed_transcript		3	-1	65529379	1786
ENSMUSG00000116113	processed_pseudogene	Gm49545	ENSMUST00000229864	processed_pseudogene		15	1	90957996	673
ENSMUSG00000078954	protein_coding	Arhgap8	ENSMUST00000168811	protein_coding	principal1	15	1	84732892	1464
ENSMUSG00000045667	protein_coding	Smtnl2	ENSMUST00000050226	protein_coding	principal2	11	-1	72411713	2624
ENSMUSG00000081065	processed_pseudogene	Gm13576	ENSMUST00000120851	processed_pseudogene		2	-1	64570640	778
ENSMUSG00000078954	protein_coding	Arhgap8	ENSMUST00000163312	processed_transcript		15	1	84741975	550
ENSMUSG00000002799	protein_coding	Jag2	ENSMUST00000075827	protein_coding	principal1	12	-1	112929776	5106
ENSMUSG00000078954	protein_coding	Arhgap8	ENSMUST00000100464	processed_transcript		15	1	84752780	377
ENSMUSG00000032301	protein_coding	Psma4	ENSMUST00000034848	protein_coding	principal1	9	1	54950790	1165
ENSMUSG00000002799	protein_coding	Jag2	ENSMUST00000223304	retained_intron		12	-1	112910368	1092
ENSMUSG00000042284	protein_coding	Itga1	ENSMUST00000224865	retained_intron		13	-1	115101729	3321
ENSMUSG00000078954	protein_coding	Arhgap8	ENSMUST00000169075	retained_intron		15	1	84769886	375
ENSMUSG00000050783	protein_coding	Htr1f	ENSMUST00000063076	protein_coding	principal1	16	-1	65105854	2579
ENSMUSG00000042284	protein_coding	Itga1	ENSMUST00000224268	processed_transcript		13	-1	115101931	3341
ENSMUSG00000042284	protein_coding	Itga1	ENSMUST00000224119	retained_intron		13	-1	115101878	2852
ENSMUSG00000002799	protein_coding	Jag2	ENSMUST00000221454	processed_transcript		12	-1	112913180	750
ENSMUSG00000068040	protein_coding	Tm9sf4	ENSMUST00000137446	processed_transcript		2	1	153161303	2274
ENSMUSG00000042284	protein_coding	Itga1	ENSMUST00000224493	retained_intron		13	-1	115101877	1850
ENSMUSG00000116833	processed_pseudogene	Gm9584	ENSMUST00000232619	processed_pseudogene		16	-1	65196449	604
ENSMUSG00000032301	protein_coding	Psma4	ENSMUST00000171578	retained_intron		9	1	54950798	868
ENSMUSG00000002799	protein_coding	Jag2	ENSMUST00000220855	retained_intron		12	-1	112913692	535
ENSMUSG00000042284	protein_coding	Itga1	ENSMUST00000224541	retained_intron		13	-1	115101710	2673
ENSMUSG00000002799	protein_coding	Jag2	ENSMUST00000223140	protein_coding		12	-1	112915957	742
ENSMUSG00000080115	protein_coding	Eef1akmt3	ENSMUST00000116231	protein_coding	principal1	10	-1	127041513	2719
ENSMUSG00000085203	antisense	Gm12927	ENSMUST00000150252	antisense		4	-1	119256975	373
ENSMUSG00000031932	protein_coding	Gpr83	ENSMUST00000034408	protein_coding	principal1	9	1	14860210	3586
ENSMUSG00000015787	protein_coding	Abo	ENSMUST00000114045	protein_coding	alternative2	2	-1	26856798	1811
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000051950	protein_coding	principal1	5	1	121711609	4472
ENSMUSG00000078954	protein_coding	Arhgap8	ENSMUST00000172307	protein_coding	principal1	15	1	84720052	1544
ENSMUSG00000032301	protein_coding	Psma4	ENSMUST00000169008	retained_intron		9	1	54950805	562
ENSMUSG00000002799	protein_coding	Jag2	ENSMUST00000221696	retained_intron		12	-1	112915993	736
ENSMUSG00000022212	protein_coding	Cpne6	ENSMUST00000165262	protein_coding	alternative1	14	1	55510445	2178
ENSMUSG00000006732	protein_coding	Mettl1	ENSMUST00000152960	protein_coding		10	1	127041414	431
ENSMUSG00000031932	protein_coding	Gpr83	ENSMUST00000115624	protein_coding		9	1	14860254	2937
ENSMUSG00000072964	protein_coding	Bhlhb9	ENSMUST00000148374	protein_coding		X	1	135885853	1058
ENSMUSG00000002799	protein_coding	Jag2	ENSMUST00000221647	retained_intron		12	-1	112916400	782
ENSMUSG00000042275	protein_coding	Pelo	ENSMUST00000109226	protein_coding	principal1	13	-1	115090186	1600
ENSMUSG00000015787	protein_coding	Abo	ENSMUST00000102900	protein_coding	principal2	2	-1	26864979	1779
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000225761	protein_coding		5	1	121711860	1434
ENSMUSG00000078954	protein_coding	Arhgap8	ENSMUST00000006029	protein_coding	principal1	15	1	84720052	1527
ENSMUSG00000031932	protein_coding	Gpr83	ENSMUST00000133278	retained_intron		9	1	14865340	4258
ENSMUSG00000112098	processed_pseudogene	Gm18876	ENSMUST00000219985	processed_pseudogene		10	1	86640683	1849
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000160813	processed_transcript		5	1	121712969	497
ENSMUSG00000032301	protein_coding	Psma4	ENSMUST00000163960	processed_transcript		9	1	54950815	244
ENSMUSG00000002799	protein_coding	Jag2	ENSMUST00000220771	processed_transcript		12	-1	112917319	691
ENSMUSG00000116396	lincRNA	Gm20556	ENSMUST00000229841	lincRNA		15	-1	84720266	1237
ENSMUSG00000036027	protein_coding	1810046K07Rik	ENSMUST00000181366	protein_coding		9	-1	51312715	1270
ENSMUSG00000083748	processed_pseudogene	Gm11662	ENSMUST00000121389	processed_pseudogene		11	-1	104680655	1193
ENSMUSG00000002799	protein_coding	Jag2	ENSMUST00000221320	retained_intron		12	-1	112916834	406
ENSMUSG00000090308	processed_pseudogene	Gm5174	ENSMUST00000171131	processed_pseudogene		10	1	86655958	1423
ENSMUSG00000002799	protein_coding	Jag2	ENSMUST00000222402	processed_transcript		12	-1	112928448	454
ENSMUSG00000032301	protein_coding	Psma4	ENSMUST00000172407	protein_coding		9	1	54950815	828
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000161064	protein_coding		5	1	121749196	3294
ENSMUSG00000072964	protein_coding	Bhlhb9	ENSMUST00000068755	protein_coding	principal1	X	1	135885853	2823
ENSMUSG00000032301	protein_coding	Psma4	ENSMUST00000164679	retained_intron		9	1	54950890	832
ENSMUSG00000068270	protein_coding	Shroom4	ENSMUST00000103005	protein_coding	principal1	X	1	6399854	4839
ENSMUSG00000036027	protein_coding	1810046K07Rik	ENSMUST00000039959	protein_coding		9	-1	51328917	1318
ENSMUSG00000060811	processed_pseudogene	Gm10088	ENSMUST00000074116	processed_pseudogene		16	1	19028232	423
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000160821	protein_coding		5	1	121777929	990
ENSMUSG00000035133	protein_coding	Arhgap5	ENSMUST00000218755	processed_transcript		12	1	52503972	1669
ENSMUSG00000036027	protein_coding	1810046K07Rik	ENSMUST00000238450	protein_coding	principal1	9	-1	51328924	1332
ENSMUSG00000032301	protein_coding	Psma4	ENSMUST00000171900	protein_coding		9	1	54951104	768
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000200499	retained_intron		5	1	121780192	3131
ENSMUSG00000072964	protein_coding	Bhlhb9	ENSMUST00000151989	retained_intron		X	1	135885983	397
ENSMUSG00000038489	protein_coding	Polr2l	ENSMUST00000043870	protein_coding	principal1	7	-1	141475132	1650
ENSMUSG00000072964	protein_coding	Bhlhb9	ENSMUST00000180025	protein_coding	principal1	X	1	135885851	2812
ENSMUSG00000068270	protein_coding	Shroom4	ENSMUST00000143641	protein_coding		X	1	6415742	755
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000162327	protein_coding		5	1	121783907	2343
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000159828	retained_intron		5	1	121785074	1003
ENSMUSG00000075111	protein_coding	Olfr1213	ENSMUST00000168169	protein_coding	principal1	2	-1	88980251	2180
ENSMUSG00000068270	protein_coding	Shroom4	ENSMUST00000089520	protein_coding		X	1	6577286	8201
ENSMUSG00000075111	protein_coding	Olfr1213	ENSMUST00000144908	protein_coding	principal1	2	-1	88980281	2612
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000161872	retained_intron		5	1	121797359	755
ENSMUSG00000029536	protein_coding	Gatc	ENSMUST00000139167	protein_coding	principal1	5	-1	115341178	1797
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000160093	processed_transcript		5	1	121801323	240
ENSMUSG00000112666	lincRNA	Gm48485	ENSMUST00000219608	lincRNA		10	1	86657405	4227
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000162459	retained_intron		5	1	121801746	754
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000199451	retained_intron		5	1	121802111	6946
ENSMUSG00000059352	processed_pseudogene	Gm10064	ENSMUST00000071235	processed_pseudogene		5	-1	122697600	399
ENSMUSG00000022212	protein_coding	Cpne6	ENSMUST00000074225	protein_coding	principal3	14	1	55510448	2201
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000161159	protein_coding		5	1	121802230	891
ENSMUSG00000087403	protein_coding	Kantr	ENSMUST00000195280	protein_coding	principal1	X	-1	152327495	4212
ENSMUSG00000075110	protein_coding	Olfr1214	ENSMUST00000216026	protein_coding	principal1	2	-1	88992653	2126
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000159928	retained_intron		5	1	121805579	1468
ENSMUSG00000087403	protein_coding	Kantr	ENSMUST00000148326	processed_transcript		X	-1	152327495	584
ENSMUSG00000075110	protein_coding	Olfr1214	ENSMUST00000217469	protein_coding	principal1	2	-1	88992653	1955
ENSMUSG00000035133	protein_coding	Arhgap5	ENSMUST00000219443	protein_coding	principal1	12	1	52504016	9323
ENSMUSG00000087403	protein_coding	Kantr	ENSMUST00000149098	processed_transcript		X	-1	152327495	445
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000160462	nonsense_mediated_decay		5	1	121806245	397
ENSMUSG00000002043	protein_coding	Trappc6a	ENSMUST00000002112	protein_coding	principal1	7	1	19508712	785
ENSMUSG00000087403	protein_coding	Kantr	ENSMUST00000181635	processed_transcript		X	-1	152327463	398
ENSMUSG00000087403	protein_coding	Kantr	ENSMUST00000125102	processed_transcript		X	-1	152318011	332
ENSMUSG00000060743	protein_coding	H3f3a	ENSMUST00000161308	protein_coding	principal2	1	-1	180813632	2841
ENSMUSG00000075110	protein_coding	Olfr1214	ENSMUST00000099804	protein_coding	principal1	2	-1	88988200	936
ENSMUSG00000035133	protein_coding	Arhgap5	ENSMUST00000217820	protein_coding		12	1	52504342	2332
ENSMUSG00000087403	protein_coding	Kantr	ENSMUST00000141922	processed_transcript		X	-1	152327470	367
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000225087	lincRNA		2	-1	128429366	1413
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000161836	retained_intron		5	1	121810664	482
ENSMUSG00000002043	protein_coding	Trappc6a	ENSMUST00000108455	protein_coding		7	1	19508726	651
ENSMUSG00000087403	protein_coding	Kantr	ENSMUST00000154085	processed_transcript		X	-1	152327470	672
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239376	lincRNA		2	-1	128429323	965
ENSMUSG00000035133	protein_coding	Arhgap5	ENSMUST00000110725	protein_coding	principal1	12	1	52516077	5197
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000161433	retained_intron		5	1	121810965	578
ENSMUSG00000006732	protein_coding	Mettl1	ENSMUST00000006915	protein_coding	principal1	10	1	127041932	1791
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239191	lincRNA		2	-1	128429218	1085
ENSMUSG00000060743	protein_coding	H3f3a	ENSMUST00000081026	protein_coding	alternative1	1	-1	180813547	888
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239314	lincRNA		2	-1	128429427	1257
ENSMUSG00000002043	protein_coding	Trappc6a	ENSMUST00000129808	retained_intron		7	1	19508730	955
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239172	lincRNA		2	-1	128429288	1119
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000160220	nonsense_mediated_decay		5	1	121811460	388
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239188	lincRNA		2	-1	128429326	1406
ENSMUSG00000112437	lincRNA	Gm35188	ENSMUST00000218869	lincRNA		12	-1	52581409	535
ENSMUSG00000066058	protein_coding	Cldn19	ENSMUST00000084309	protein_coding	principal1	4	1	119255414	924
ENSMUSG00000060743	protein_coding	H3f3a	ENSMUST00000162814	protein_coding	principal2	1	-1	180813943	724
ENSMUSG00000068762	protein_coding	Gstm6	ENSMUST00000106685	protein_coding	principal1	3	-1	107943749	1153
ENSMUSG00000002043	protein_coding	Trappc6a	ENSMUST00000135972	protein_coding		7	1	19514420	505
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000224993	lincRNA		2	-1	128429234	1832
ENSMUSG00000042605	protein_coding	Atxn2	ENSMUST00000199864	protein_coding		5	1	121811507	412
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000143065	lincRNA		2	-1	128429288	1105
ENSMUSG00000022212	protein_coding	Cpne6	ENSMUST00000170155	retained_intron		14	1	55510475	4000
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239387	lincRNA		2	-1	128429325	1464
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239179	lincRNA		2	-1	128429341	1354
ENSMUSG00000060743	protein_coding	H3f3a	ENSMUST00000159789	protein_coding		1	-1	180813534	481
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239237	lincRNA		2	-1	128429326	2037
ENSMUSG00000006732	protein_coding	Mettl1	ENSMUST00000135655	retained_intron		10	1	127041957	1057
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239311	lincRNA		2	-1	128240685	1228
ENSMUSG00000023277	protein_coding	Twf2	ENSMUST00000024047	protein_coding	principal1	9	1	106203108	1596
ENSMUSG00000051323	protein_coding	Pcdh19	ENSMUST00000149154	protein_coding	principal3	X	-1	133688987	10289
ENSMUSG00000022212	protein_coding	Cpne6	ENSMUST00000165725	nonsense_mediated_decay		14	1	55510597	794
ENSMUSG00000058152	protein_coding	Chsy3	ENSMUST00000237594	retained_intron		18	1	59175401	3841
ENSMUSG00000023277	protein_coding	Twf2	ENSMUST00000216348	protein_coding		9	1	106203114	853
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000136025	lincRNA		2	-1	128239643	889
ENSMUSG00000006732	protein_coding	Mettl1	ENSMUST00000120542	protein_coding		10	1	127041958	1044
ENSMUSG00000022212	protein_coding	Cpne6	ENSMUST00000169869	retained_intron		14	1	55511311	2657
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239371	lincRNA		2	-1	128333813	994
ENSMUSG00000068762	protein_coding	Gstm6	ENSMUST00000106684	protein_coding		3	-1	107943734	1179
ENSMUSG00000023277	protein_coding	Twf2	ENSMUST00000187944	nonsense_mediated_decay		9	1	106203137	839
ENSMUSG00000066058	protein_coding	Cldn19	ENSMUST00000094823	protein_coding		4	1	119255509	4168
ENSMUSG00000020216	protein_coding	Jsrp1	ENSMUST00000181039	protein_coding	principal2	10	-1	80813492	1108
ENSMUSG00000058152	protein_coding	Chsy3	ENSMUST00000238155	nonsense_mediated_decay		18	1	59175453	4655
ENSMUSG00000023277	protein_coding	Twf2	ENSMUST00000187647	nonsense_mediated_decay		9	1	106203145	576
ENSMUSG00000022212	protein_coding	Cpne6	ENSMUST00000163767	protein_coding	principal3	14	1	55511360	2004
ENSMUSG00000006732	protein_coding	Mettl1	ENSMUST00000139486	nonsense_mediated_decay		10	1	127041983	1089
ENSMUSG00000068762	protein_coding	Gstm6	ENSMUST00000106683	protein_coding		3	-1	107943362	745
ENSMUSG00000090199	antisense	Gm16029	ENSMUST00000161643	antisense		15	1	7397897	2427
ENSMUSG00000060743	protein_coding	H3f3a	ENSMUST00000159441	retained_intron		1	-1	180813603	807
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239198	lincRNA		2	-1	128429863	3309
ENSMUSG00000089966	processed_pseudogene	Gm16030	ENSMUST00000159098	processed_pseudogene		15	1	7341914	603
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239341	lincRNA		2	-1	128429326	999
ENSMUSG00000003923	protein_coding	Tfam	ENSMUST00000092430	protein_coding	principal2	10	-1	71238280	4167
ENSMUSG00000083991	unprocessed_pseudogene	Gm11618	ENSMUST00000117946	unprocessed_pseudogene		11	1	101352236	267
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000135433	lincRNA		2	-1	128429325	933
ENSMUSG00000060743	protein_coding	H3f3a	ENSMUST00000162118	protein_coding		1	-1	180813603	419
ENSMUSG00000066892	protein_coding	Fbxl12	ENSMUST00000155301	protein_coding		9	-1	20642313	476
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239349	lincRNA		2	-1	128429320	1023
ENSMUSG00000058152	protein_coding	Chsy3	ENSMUST00000080721	protein_coding	principal1	18	1	59175650	3572
ENSMUSG00000068762	protein_coding	Gstm6	ENSMUST00000155926	nonsense_mediated_decay		3	-1	107943383	704
ENSMUSG00000051323	protein_coding	Pcdh19	ENSMUST00000167944	protein_coding	alternative1	X	-1	133687264	8407
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239210	lincRNA		2	-1	128429325	1123
ENSMUSG00000022212	protein_coding	Cpne6	ENSMUST00000171643	protein_coding	principal3	14	1	55511985	2016
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239336	lincRNA		2	-1	128333832	754
ENSMUSG00000020216	protein_coding	Jsrp1	ENSMUST00000181945	nonsense_mediated_decay		10	-1	80813495	1325
ENSMUSG00000082478	processed_pseudogene	Gm11619	ENSMUST00000117474	processed_pseudogene		11	-1	101353545	237
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239197	lincRNA		2	-1	128429884	1633
ENSMUSG00000003923	protein_coding	Tfam	ENSMUST00000105432	protein_coding	alternative2	10	-1	71238280	779
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000180037	protein_coding	principal2	17	1	74528295	15768
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239302	lincRNA		2	-1	128429323	794
ENSMUSG00000066892	protein_coding	Fbxl12	ENSMUST00000155280	processed_transcript		9	-1	20644747	356
ENSMUSG00000060743	protein_coding	H3f3a	ENSMUST00000159685	protein_coding		1	-1	180813603	371
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239218	lincRNA		2	-1	128429360	1135
ENSMUSG00000118327	processed_pseudogene	Gm8697	ENSMUST00000235423	processed_pseudogene		18	-1	59774471	243
ENSMUSG00000116383	transcribed_unprocessed_pseudogene	Apol10c-ps	ENSMUST00000230492	transcribed_unprocessed_pseudogene		15	-1	77656841	841
ENSMUSG00000066892	protein_coding	Fbxl12	ENSMUST00000131128	protein_coding		9	-1	20644755	4182
ENSMUSG00000020216	protein_coding	Jsrp1	ENSMUST00000180438	protein_coding		10	-1	80813498	359
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239182	lincRNA		2	-1	128315999	4316
ENSMUSG00000023277	protein_coding	Twf2	ENSMUST00000189708	retained_intron		9	1	106206776	1627
ENSMUSG00000003923	protein_coding	Tfam	ENSMUST00000145220	processed_transcript		10	-1	71235321	596
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239202	lincRNA		2	-1	128429255	915
ENSMUSG00000116383	transcribed_unprocessed_pseudogene	Apol10c-ps	ENSMUST00000229391	processed_transcript		15	-1	77659841	663
ENSMUSG00000073485	antisense	H3f3aos	ENSMUST00000159740	antisense		1	1	180813776	229
ENSMUSG00000117940	processed_pseudogene	Gm50235	ENSMUST00000235963	processed_pseudogene		18	1	59855122	331
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239265	lincRNA		2	-1	128429323	763
ENSMUSG00000020216	protein_coding	Jsrp1	ENSMUST00000020435	protein_coding	alternative2	10	-1	80811885	955
ENSMUSG00000023277	protein_coding	Twf2	ENSMUST00000188650	protein_coding		9	1	106206798	1508
ENSMUSG00000073485	antisense	H3f3aos	ENSMUST00000097448	antisense		1	1	180813784	2905
ENSMUSG00000068762	protein_coding	Gstm6	ENSMUST00000106681	protein_coding		3	-1	107943413	623
ENSMUSG00000066892	protein_coding	Fbxl12	ENSMUST00000140702	protein_coding		9	-1	20639340	1555
ENSMUSG00000049811	protein_coding	Fam161a	ENSMUST00000173923	protein_coding		11	1	23007531	545
ENSMUSG00000023277	protein_coding	Twf2	ENSMUST00000216850	protein_coding		9	1	106211719	620
ENSMUSG00000051323	protein_coding	Pcdh19	ENSMUST00000060309	protein_coding		X	-1	133685893	7035
ENSMUSG00000117701	lincRNA	Gm38695	ENSMUST00000237574	lincRNA		18	-1	59855462	705
ENSMUSG00000068762	protein_coding	Gstm6	ENSMUST00000106680	processed_transcript		3	-1	107943715	1143
ENSMUSG00000051323	protein_coding	Pcdh19	ENSMUST00000193376	nonsense_mediated_decay		X	-1	133588011	335
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239221	lincRNA		2	-1	128429391	1999
ENSMUSG00000085269	antisense	Gm15777	ENSMUST00000123463	antisense		5	1	100670859	876
ENSMUSG00000003923	protein_coding	Tfam	ENSMUST00000121685	protein_coding	alternative2	10	-1	71237678	899
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239358	lincRNA		2	-1	128331305	1602
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239275	lincRNA		2	-1	128333868	1797
ENSMUSG00000003923	protein_coding	Tfam	ENSMUST00000152505	protein_coding		10	-1	71237042	472
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239382	lincRNA		2	-1	128429326	1880
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000154173	lincRNA		2	-1	128429193	1050
ENSMUSG00000024172	protein_coding	St6gal2	ENSMUST00000133899	protein_coding		17	1	55445382	1556
ENSMUSG00000060890	protein_coding	Arr3	ENSMUST00000113769	protein_coding	principal1	X	1	100605497	1359
ENSMUSG00000022100	protein_coding	Xpo7	ENSMUST00000022696	protein_coding	principal2	14	-1	70766554	4472
ENSMUSG00000023277	protein_coding	Twf2	ENSMUST00000217523	retained_intron		9	1	106212189	819
ENSMUSG00000051323	protein_coding	Pcdh19	ENSMUST00000193485	processed_transcript		X	-1	133684991	405
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182944	protein_coding	alternative2	17	1	74528468	14610
ENSMUSG00000066892	protein_coding	Fbxl12	ENSMUST00000148631	protein_coding	principal1	9	-1	20644747	3756
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000151427	lincRNA		2	-1	128429170	589
ENSMUSG00000105231	IG_J_gene	Iglj3	ENSMUST00000200211	IG_J_gene	principal1	16	-1	19067078	38
ENSMUSG00000023277	protein_coding	Twf2	ENSMUST00000216541	retained_intron		9	1	106212262	744
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239295	lincRNA		2	-1	128429391	932
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239251	lincRNA		2	-1	128333753	584
ENSMUSG00000022100	protein_coding	Xpo7	ENSMUST00000228346	protein_coding	alternative1	14	-1	70708035	4491
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239297	lincRNA		2	-1	128333842	498
ENSMUSG00000105547	IG_C_gene	Iglc3	ENSMUST00000200235	IG_C_gene	principal1	16	-1	19065681	452
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239366	lincRNA		2	-1	128429252	1673
ENSMUSG00000030224	protein_coding	Strap	ENSMUST00000064910	protein_coding	principal1	6	1	137735078	2650
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239330	lincRNA		2	-1	128429393	678
ENSMUSG00000066892	protein_coding	Fbxl12	ENSMUST00000151861	protein_coding		9	-1	20644755	1668
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239208	lincRNA		2	-1	128333782	480
ENSMUSG00000022100	protein_coding	Xpo7	ENSMUST00000226448	protein_coding		14	-1	70766552	3663
ENSMUSG00000083834	processed_pseudogene	Gm12577	ENSMUST00000119701	processed_pseudogene		4	-1	58483825	574
ENSMUSG00000106668	IG_J_gene	Iglj1	ENSMUST00000199490	IG_J_gene	principal1	16	-1	19063262	38
ENSMUSG00000068040	protein_coding	Tm9sf4	ENSMUST00000089027	protein_coding	principal1	2	1	153161303	3896
ENSMUSG00000106405	IG_J_gene	Iglj3p	ENSMUST00000200074	IG_J_gene	principal1	16	-1	19066408	38
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000132149	lincRNA		2	-1	128429240	942
ENSMUSG00000049811	protein_coding	Fam161a	ENSMUST00000172602	protein_coding	alternative2	11	1	23008347	1935
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239319	lincRNA		2	-1	128429326	1179
ENSMUSG00000115845	lincRNA	4933402J15Rik	ENSMUST00000226927	lincRNA		14	1	74355527	1660
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239241	lincRNA		2	-1	128429326	1136
ENSMUSG00000105906	IG_C_gene	Iglc1	ENSMUST00000200568	IG_C_gene	principal1	16	-1	19062071	454
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239194	lincRNA		2	-1	128429296	467
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239248	lincRNA		2	-1	128429323	531
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182597	protein_coding	alternative2	17	1	74528468	14649
ENSMUSG00000068040	protein_coding	Tm9sf4	ENSMUST00000141220	processed_transcript		2	1	153161541	657
ENSMUSG00000049811	protein_coding	Fam161a	ENSMUST00000109557	protein_coding	alternative2	11	1	23008465	1947
ENSMUSG00000106567	antisense	2010309G21Rik	ENSMUST00000198927	antisense		16	1	19051367	458
ENSMUSG00000010825	protein_coding	Grid2ip	ENSMUST00000110733	protein_coding	principal1	5	1	143357338	3825
ENSMUSG00000115704	lincRNA	Gm49171	ENSMUST00000226557	lincRNA		14	-1	74451303	1151
ENSMUSG00000068040	protein_coding	Tm9sf4	ENSMUST00000147978	retained_intron		2	1	153161548	2473
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182133	protein_coding	alternative2	17	1	74528468	14604
ENSMUSG00000115411	processed_pseudogene	Gm6986	ENSMUST00000228329	processed_pseudogene		14	1	74297545	1231
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239199	lincRNA		2	-1	128429871	1105
ENSMUSG00000049811	protein_coding	Fam161a	ENSMUST00000058269	protein_coding	alternative2	11	1	23013387	1927
ENSMUSG00000084908	antisense	C79798	ENSMUST00000131588	antisense		2	1	34287771	1793
ENSMUSG00000030224	protein_coding	Strap	ENSMUST00000154698	processed_transcript		6	1	137745040	505
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000138486	lincRNA		2	-1	128422716	448
ENSMUSG00000022245	protein_coding	Skor1	ENSMUST00000119146	protein_coding	alternative2	9	-1	63147011	3610
ENSMUSG00000076934	IG_V_gene	Iglv1	ENSMUST00000103746	IG_V_gene	principal1	16	-1	19085500	391
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239374	lincRNA		2	-1	128429589	682
ENSMUSG00000068040	protein_coding	Tm9sf4	ENSMUST00000140988	retained_intron		2	1	153190399	921
ENSMUSG00000030224	protein_coding	Strap	ENSMUST00000137235	retained_intron		6	1	137749225	331
ENSMUSG00000078867	protein_coding	Gm14418	ENSMUST00000128657	protein_coding	principal1	2	-1	177394699	1077
ENSMUSG00000068040	protein_coding	Tm9sf4	ENSMUST00000145010	processed_transcript		2	1	153190926	794
ENSMUSG00000022100	protein_coding	Xpo7	ENSMUST00000226607	retained_intron		14	-1	70766550	2769
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182382	retained_intron		17	1	74528522	2804
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000125354	lincRNA		2	-1	128429082	610
ENSMUSG00000022100	protein_coding	Xpo7	ENSMUST00000227550	retained_intron		14	-1	70685557	3580
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000183224	protein_coding	alternative2	17	1	74528552	14562
ENSMUSG00000010825	protein_coding	Grid2ip	ENSMUST00000010969	protein_coding		5	1	143363908	3459
ENSMUSG00000068040	protein_coding	Tm9sf4	ENSMUST00000134922	processed_transcript		2	1	153194341	668
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239293	lincRNA		2	-1	128426717	545
ENSMUSG00000014932	protein_coding	Yes1	ENSMUST00000202543	protein_coding	principal1	5	1	32611171	2657
ENSMUSG00000049811	protein_coding	Fam161a	ENSMUST00000208732	protein_coding		11	1	23020000	2034
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000239270	lincRNA		2	-1	128402965	558
ENSMUSG00000082534	unprocessed_pseudogene	Gm13712	ENSMUST00000117484	unprocessed_pseudogene		2	-1	85158642	2295
ENSMUSG00000068040	protein_coding	Tm9sf4	ENSMUST00000146477	processed_transcript		2	1	153195530	604
ENSMUSG00000078867	protein_coding	Gm14418	ENSMUST00000149689	processed_transcript		2	-1	177398320	588
ENSMUSG00000074813	lincRNA	Morrbid	ENSMUST00000223654	lincRNA		2	-1	128502765	681
ENSMUSG00000114963	lincRNA	Gm29010	ENSMUST00000224297	lincRNA		2	1	128433723	1042
ENSMUSG00000015437	protein_coding	Gzmb	ENSMUST00000015581	protein_coding	principal1	14	-1	56262260	1436
ENSMUSG00000078867	protein_coding	Gm14418	ENSMUST00000108955	protein_coding		2	-1	177398319	1415
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182631	retained_intron		17	1	74546198	617
ENSMUSG00000049811	protein_coding	Fam161a	ENSMUST00000094363	protein_coding		11	1	23020470	2597
ENSMUSG00000022245	protein_coding	Skor1	ENSMUST00000116613	protein_coding	alternative2	9	-1	63148961	3591
ENSMUSG00000066892	protein_coding	Fbxl12	ENSMUST00000086458	protein_coding		9	-1	20644767	2056
ENSMUSG00000010825	protein_coding	Grid2ip	ENSMUST00000120825	protein_coding		5	1	143370092	3865
ENSMUSG00000022100	protein_coding	Xpo7	ENSMUST00000167242	protein_coding	alternative1	14	-1	70766628	15121
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182257	retained_intron		17	1	74556783	2707
ENSMUSG00000114820	processed_pseudogene	Gm48200	ENSMUST00000224940	processed_pseudogene		14	1	56275793	611
ENSMUSG00000049811	protein_coding	Fam161a	ENSMUST00000151877	protein_coding		11	1	23020556	1047
ENSMUSG00000068040	protein_coding	Tm9sf4	ENSMUST00000152807	retained_intron		2	1	153200248	2705
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182108	retained_intron		17	1	74560783	563
ENSMUSG00000079053	lincRNA	Gm14010	ENSMUST00000131961	lincRNA		2	1	128423654	374
ENSMUSG00000049811	protein_coding	Fam161a	ENSMUST00000238880	protein_coding	principal2	11	1	23013387	1935
ENSMUSG00000068040	protein_coding	Tm9sf4	ENSMUST00000149390	retained_intron		2	1	153202134	2338
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000177957	protein_coding		17	1	74598121	2919
ENSMUSG00000022986	protein_coding	Krt75	ENSMUST00000042957	protein_coding	principal1	15	-1	101573904	3266
ENSMUSG00000066892	protein_coding	Fbxl12	ENSMUST00000131343	protein_coding		9	-1	20644758	761
ENSMUSG00000022312	protein_coding	Eif3h	ENSMUST00000022925	protein_coding	principal1	15	-1	51865523	1295
ENSMUSG00000116499	processed_pseudogene	Gm7318	ENSMUST00000230007	processed_pseudogene		15	1	78820810	593
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182323	protein_coding		17	1	74604494	482
ENSMUSG00000085750	lincRNA	Gm14009	ENSMUST00000152439	lincRNA		2	1	128189987	656
ENSMUSG00000029319	protein_coding	Coq2	ENSMUST00000031262	protein_coding	principal1	5	-1	100674284	1743
ENSMUSG00000014932	protein_coding	Yes1	ENSMUST00000072311	protein_coding	principal1	5	1	32611184	4586
ENSMUSG00000066892	protein_coding	Fbxl12	ENSMUST00000153154	retained_intron		9	-1	20644742	808
ENSMUSG00000022245	protein_coding	Skor1	ENSMUST00000055281	protein_coding	principal3	9	-1	63146980	3657
ENSMUSG00000024172	protein_coding	St6gal2	ENSMUST00000086878	protein_coding		17	1	55445389	2606
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182845	protein_coding		17	1	74611078	1311
ENSMUSG00000066892	protein_coding	Fbxl12	ENSMUST00000086459	protein_coding	principal1	9	-1	20642806	2086
ENSMUSG00000115983	unprocessed_pseudogene	Gm5476	ENSMUST00000230770	unprocessed_pseudogene		15	-1	101588543	395
ENSMUSG00000014932	protein_coding	Yes1	ENSMUST00000200779	retained_intron		5	1	32611198	2749
ENSMUSG00000022312	protein_coding	Eif3h	ENSMUST00000226756	processed_transcript		15	-1	51790549	520
ENSMUSG00000116129	transcribed_unprocessed_pseudogene	Gm5477	ENSMUST00000231005	transcribed_unprocessed_pseudogene		15	1	101608715	990
ENSMUSG00000098111	processed_pseudogene	Gm4654	ENSMUST00000183305	processed_pseudogene		14	-1	103371446	982
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182164	retained_intron		17	1	74611447	4765
ENSMUSG00000022312	protein_coding	Eif3h	ENSMUST00000228625	processed_transcript		15	-1	51836257	489
ENSMUSG00000116129	transcribed_unprocessed_pseudogene	Gm5477	ENSMUST00000229752	processed_transcript		15	1	101609436	607
ENSMUSG00000067860	protein_coding	Zic3	ENSMUST00000137687	protein_coding		X	1	58022700	566
ENSMUSG00000024172	protein_coding	St6gal2	ENSMUST00000025000	protein_coding	principal1	17	1	55445550	6066
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182278	protein_coding		17	1	74611477	1029
ENSMUSG00000106300	antisense	Gm42765	ENSMUST00000199429	antisense		5	1	30529457	931
ENSMUSG00000060890	protein_coding	Arr3	ENSMUST00000135237	retained_intron		X	1	100605523	794
ENSMUSG00000115860	processed_pseudogene	Gm49426	ENSMUST00000231195	processed_pseudogene		15	-1	101615407	111
ENSMUSG00000029319	protein_coding	Coq2	ENSMUST00000135146	nonsense_mediated_decay		5	-1	100674156	1043
ENSMUSG00000022312	protein_coding	Eif3h	ENSMUST00000228583	retained_intron		15	-1	51865454	619
ENSMUSG00000115099	lincRNA	1700087I21Rik	ENSMUST00000228080	lincRNA		14	1	103424905	3680
ENSMUSG00000106300	antisense	Gm42765	ENSMUST00000200017	antisense		5	1	30529500	3131
ENSMUSG00000116687	processed_pseudogene	Gm49629	ENSMUST00000232590	processed_pseudogene		16	1	65339118	344
ENSMUSG00000115099	lincRNA	1700087I21Rik	ENSMUST00000226705	lincRNA		14	1	103438682	788
ENSMUSG00000014932	protein_coding	Yes1	ENSMUST00000168707	protein_coding	principal1	5	1	32611335	2259
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000154429	retained_intron		9	1	20642878	2511
ENSMUSG00000010825	protein_coding	Grid2ip	ENSMUST00000196148	retained_intron		5	1	143372974	2760
ENSMUSG00000024172	protein_coding	St6gal2	ENSMUST00000153220	processed_transcript		17	1	55446244	647
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182221	retained_intron		17	1	74612225	783
ENSMUSG00000116356	processed_pseudogene	Gm49407	ENSMUST00000231116	processed_pseudogene		15	-1	77668736	244
ENSMUSG00000010825	protein_coding	Grid2ip	ENSMUST00000138948	retained_intron		5	1	143375461	724
ENSMUSG00000014932	protein_coding	Yes1	ENSMUST00000200999	protein_coding		5	1	32639531	1403
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000234521	protein_coding		17	1	74635722	763
ENSMUSG00000093720	antisense	Gm20635	ENSMUST00000176473	antisense		5	-1	143403748	1287
ENSMUSG00000029319	protein_coding	Coq2	ENSMUST00000126981	nonsense_mediated_decay		5	-1	100674249	667
ENSMUSG00000105594	TEC	Gm43398	ENSMUST00000196584	TEC		5	1	143395503	2742
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182817	nonsense_mediated_decay		17	1	74652632	730
ENSMUSG00000060890	protein_coding	Arr3	ENSMUST00000141676	retained_intron		X	1	100605544	749
ENSMUSG00000060890	protein_coding	Arr3	ENSMUST00000154771	retained_intron		X	1	100605555	774
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000183010	processed_transcript		17	1	74652642	289
ENSMUSG00000029319	protein_coding	Coq2	ENSMUST00000135801	protein_coding		5	-1	100664419	1060
ENSMUSG00000029319	protein_coding	Coq2	ENSMUST00000127811	protein_coding		5	-1	100675140	342
ENSMUSG00000064232	protein_coding	Gm5414	ENSMUST00000062879	protein_coding	principal1	15	-1	101628188	1659
ENSMUSG00000084104	processed_pseudogene	Gm13578	ENSMUST00000120849	processed_pseudogene		2	-1	64868588	590
ENSMUSG00000060890	protein_coding	Arr3	ENSMUST00000131906	retained_intron		X	1	100605562	1692
ENSMUSG00000060890	protein_coding	Arr3	ENSMUST00000164940	protein_coding		X	1	100605647	423
ENSMUSG00000060890	protein_coding	Arr3	ENSMUST00000166688	retained_intron		X	1	100611839	882
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000183249	nonsense_mediated_decay		17	1	74654389	4094
ENSMUSG00000053194	protein_coding	Cib4	ENSMUST00000065486	protein_coding	principal1	5	-1	30545836	769
ENSMUSG00000059540	protein_coding	Tcea2	ENSMUST00000129686	retained_intron		2	1	181680310	2167
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182147	retained_intron		17	1	74659146	784
ENSMUSG00000067860	protein_coding	Zic3	ENSMUST00000088627	protein_coding	principal2	X	1	58030643	3949
ENSMUSG00000045322	protein_coding	Tlr9	ENSMUST00000062241	protein_coding	principal1	9	1	106222598	3478
ENSMUSG00000078308	lincRNA	Gm47854	ENSMUST00000089534	lincRNA		9	-1	51655127	3549
ENSMUSG00000032373	protein_coding	Car12	ENSMUST00000071889	protein_coding	principal3	9	1	66713686	3716
ENSMUSG00000111162	processed_pseudogene	Gm7293	ENSMUST00000216682	processed_pseudogene		9	1	51622745	1007
ENSMUSG00000117840	lincRNA	Gm50399	ENSMUST00000236587	lincRNA		18	1	35862251	835
ENSMUSG00000115903	unprocessed_pseudogene	Gm17851	ENSMUST00000229579	unprocessed_pseudogene		15	1	101638595	717
ENSMUSG00000110825	processed_pseudogene	Gm8959	ENSMUST00000213150	processed_pseudogene		9	1	51656891	571
ENSMUSG00000067860	protein_coding	Zic3	ENSMUST00000088631	protein_coding		X	1	58030999	2980
ENSMUSG00000118080	lincRNA	Gm41693	ENSMUST00000235808	lincRNA		18	1	35874314	539
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182804	retained_intron		17	1	74670207	4469
ENSMUSG00000024073	protein_coding	Birc6	ENSMUST00000182157	retained_intron		17	1	74697356	1030
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000230822	retained_intron		15	-1	76597555	1415
ENSMUSG00000032373	protein_coding	Car12	ENSMUST00000152011	retained_intron		9	1	66713727	1652
ENSMUSG00000067860	protein_coding	Zic3	ENSMUST00000088629	protein_coding	alternative1	X	1	58031010	1951
ENSMUSG00000032373	protein_coding	Car12	ENSMUST00000123195	retained_intron		9	1	66713728	710
ENSMUSG00000032373	protein_coding	Car12	ENSMUST00000217394	retained_intron		9	1	66713729	3263
ENSMUSG00000032373	protein_coding	Car12	ENSMUST00000085420	protein_coding	alternative2	9	1	66713730	3639
ENSMUSG00000049265	protein_coding	Kcnk3	ENSMUST00000066295	protein_coding	principal1	5	1	30588170	3811
ENSMUSG00000020736	protein_coding	Nt5c	ENSMUST00000106530	protein_coding		11	-1	115491815	836
ENSMUSG00000032373	protein_coding	Car12	ENSMUST00000134829	protein_coding		9	1	66747710	614
ENSMUSG00000095241	protein_coding	Gm5478	ENSMUST00000229963	protein_coding	principal1	15	-1	101647380	2158
ENSMUSG00000049265	protein_coding	Kcnk3	ENSMUST00000197428	processed_transcript		5	1	30621373	507
ENSMUSG00000022229	protein_coding	Atp12a	ENSMUST00000007340	protein_coding	principal1	14	1	56365068	3950
ENSMUSG00000095241	protein_coding	Gm5478	ENSMUST00000230401	retained_intron		15	-1	101647380	2960
ENSMUSG00000053214	processed_transcript	Gm9899	ENSMUST00000199326	lincRNA		5	-1	30588619	4823
ENSMUSG00000053214	processed_transcript	Gm9899	ENSMUST00000200563	retained_intron		5	-1	30579855	1907
ENSMUSG00000095241	protein_coding	Gm5478	ENSMUST00000100184	protein_coding		15	-1	101647380	2566
ENSMUSG00000053214	processed_transcript	Gm9899	ENSMUST00000065519	pseudogene		5	-1	30578025	555
ENSMUSG00000118545	unprocessed_pseudogene	AC120787.1	ENSMUST00000239024	unprocessed_pseudogene		15	1	101666006	141
ENSMUSG00000022229	protein_coding	Atp12a	ENSMUST00000225698	processed_transcript		14	1	56375998	453
ENSMUSG00000118358	lincRNA	Gm36315	ENSMUST00000237036	lincRNA		18	-1	35890337	968
ENSMUSG00000114345	antisense	Gm10873	ENSMUST00000225567	antisense		14	-1	56391562	2705
ENSMUSG00000118347	lincRNA	C330008A17Rik	ENSMUST00000237014	lincRNA		18	1	35913132	677
ENSMUSG00000020736	protein_coding	Nt5c	ENSMUST00000021082	protein_coding	principal1	11	-1	115491862	858
ENSMUSG00000022681	protein_coding	Ntan1	ENSMUST00000230788	processed_transcript		16	1	13818845	645
ENSMUSG00000032011	protein_coding	Thy1	ENSMUST00000114840	protein_coding	principal1	9	1	44043384	1735
ENSMUSG00000109125	lincRNA	Gm45159	ENSMUST00000208630	lincRNA		7	1	90887072	25241
ENSMUSG00000045731	protein_coding	Pnoc	ENSMUST00000059339	protein_coding	principal2	14	-1	65425472	2157
ENSMUSG00000014956	protein_coding	Ppp1cb	ENSMUST00000015100	protein_coding	principal1	5	1	32458843	5962
ENSMUSG00000109387	TEC	Gm45182	ENSMUST00000207579	TEC		7	1	91158600	2404
ENSMUSG00000032011	protein_coding	Thy1	ENSMUST00000215156	protein_coding		9	1	44043780	460
ENSMUSG00000108826	TEC	4931412I15Rik	ENSMUST00000207844	TEC		7	-1	92082536	1448
ENSMUSG00000032011	protein_coding	Thy1	ENSMUST00000213632	retained_intron		9	1	44045184	1192
ENSMUSG00000038718	protein_coding	Pbx3	ENSMUST00000113132	protein_coding	alternative1	2	-1	34372038	2734
ENSMUSG00000108956	TEC	Gm45179	ENSMUST00000208452	TEC		7	1	91048999	4337
ENSMUSG00000004842	protein_coding	Pou1f1	ENSMUST00000176330	protein_coding	principal1	16	1	65520511	1310
ENSMUSG00000014956	protein_coding	Ppp1cb	ENSMUST00000201360	nonsense_mediated_decay		5	1	32459152	2347
ENSMUSG00000032011	protein_coding	Thy1	ENSMUST00000215809	protein_coding		9	1	44045672	685
ENSMUSG00000045731	protein_coding	Pnoc	ENSMUST00000224594	protein_coding	alternative2	14	-1	65425160	1388
ENSMUSG00000014956	protein_coding	Ppp1cb	ENSMUST00000201600	retained_intron		5	1	32459186	4000
ENSMUSG00000004842	protein_coding	Pou1f1	ENSMUST00000175882	retained_intron		16	1	65520512	2240
ENSMUSG00000032011	protein_coding	Thy1	ENSMUST00000214627	protein_coding		9	1	44045944	446
ENSMUSG00000014956	protein_coding	Ppp1cb	ENSMUST00000202078	protein_coding		5	1	32459222	383
ENSMUSG00000032011	protein_coding	Thy1	ENSMUST00000213733	processed_transcript		9	1	44047922	449
ENSMUSG00000020736	protein_coding	Nt5c	ENSMUST00000124778	retained_intron		11	-1	115491851	907
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000229269	processed_transcript		15	-1	76598092	1433
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000207095	retained_intron		7	1	90476672	2397
ENSMUSG00000020736	protein_coding	Nt5c	ENSMUST00000125940	retained_intron		11	-1	115491202	395
ENSMUSG00000014956	protein_coding	Ppp1cb	ENSMUST00000201207	processed_transcript		5	1	32478095	638
ENSMUSG00000041096	protein_coding	Tspyl2	ENSMUST00000149685	retained_intron		X	-1	152342425	2804
ENSMUSG00000057948	protein_coding	Unc13d	ENSMUST00000106450	protein_coding	alternative2	11	-1	116077750	4046
ENSMUSG00000020736	protein_coding	Nt5c	ENSMUST00000130668	retained_intron		11	-1	115491371	359
ENSMUSG00000014956	protein_coding	Ppp1cb	ENSMUST00000201880	nonsense_mediated_decay		5	1	32485970	861
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000208919	protein_coding		7	1	90476694	396
ENSMUSG00000041096	protein_coding	Tspyl2	ENSMUST00000138918	retained_intron		X	-1	152342425	2658
ENSMUSG00000107277	TEC	Gm10461	ENSMUST00000202073	TEC		5	-1	32611805	4786
ENSMUSG00000027509	protein_coding	Rae1	ENSMUST00000029013	protein_coding	principal1	2	1	173000117	1742
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000231273	protein_coding		13	1	111680979	657
ENSMUSG00000107083	TEC	Gm43313	ENSMUST00000201398	TEC		5	1	32467195	2235
ENSMUSG00000057948	protein_coding	Unc13d	ENSMUST00000173345	nonsense_mediated_decay		11	-1	116077624	3514
ENSMUSG00000107018	TEC	Gm43694	ENSMUST00000200773	TEC		5	1	32629842	1119
ENSMUSG00000004842	protein_coding	Pou1f1	ENSMUST00000176038	protein_coding		16	1	65520548	1174
ENSMUSG00000107316	processed_pseudogene	Gm42964	ENSMUST00000202965	processed_pseudogene		5	-1	32548317	382
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000209170	processed_transcript		7	1	90477172	1057
ENSMUSG00000028266	protein_coding	Lmo4	ENSMUST00000121796	protein_coding	principal1	3	-1	144202396	1417
ENSMUSG00000004842	protein_coding	Pou1f1	ENSMUST00000184525	protein_coding		16	1	65523277	1020
ENSMUSG00000096225	protein_coding	Lhx8	ENSMUST00000177846	protein_coding		3	-1	154330659	2076
ENSMUSG00000038806	protein_coding	Sde2	ENSMUST00000038091	protein_coding	principal1	1	1	180851127	3213
ENSMUSG00000027509	protein_coding	Rae1	ENSMUST00000132212	protein_coding		2	1	173000124	742
ENSMUSG00000057948	protein_coding	Unc13d	ENSMUST00000174822	protein_coding	principal2	11	-1	116077590	3337
ENSMUSG00000038718	protein_coding	Pbx3	ENSMUST00000040638	protein_coding	principal3	2	-1	34372044	2587
ENSMUSG00000038806	protein_coding	Sde2	ENSMUST00000194948	retained_intron		1	1	180862100	924
ENSMUSG00000027509	protein_coding	Rae1	ENSMUST00000124793	retained_intron		2	1	173006644	558
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000229982	retained_intron		15	-1	76598887	1516
ENSMUSG00000103979	processed_pseudogene	Gm20305	ENSMUST00000193226	processed_pseudogene		1	-1	180854458	177
ENSMUSG00000096225	protein_coding	Lhx8	ENSMUST00000205251	protein_coding	principal1	3	-1	154330059	1729
ENSMUSG00000027509	protein_coding	Rae1	ENSMUST00000123039	retained_intron		2	1	173011664	787
ENSMUSG00000028266	protein_coding	Lmo4	ENSMUST00000120539	protein_coding	principal1	3	-1	144205220	1669
ENSMUSG00000027509	protein_coding	Rae1	ENSMUST00000138237	retained_intron		2	1	173012461	506
ENSMUSG00000004842	protein_coding	Pou1f1	ENSMUST00000004964	protein_coding		16	1	65520512	1773
ENSMUSG00000116699	lincRNA	Gm49631	ENSMUST00000232553	lincRNA		16	-1	65526171	615
ENSMUSG00000057219	protein_coding	Armc7	ENSMUST00000035240	protein_coding	principal1	11	1	115475667	2260
ENSMUSG00000038718	protein_coding	Pbx3	ENSMUST00000176213	processed_transcript		2	-1	34288852	1026
ENSMUSG00000057948	protein_coding	Unc13d	ENSMUST00000173943	retained_intron		11	-1	116070355	766
ENSMUSG00000023041	protein_coding	Krt6b	ENSMUST00000023786	protein_coding	principal1	15	-1	101680287	2235
ENSMUSG00000028266	protein_coding	Lmo4	ENSMUST00000121112	protein_coding	principal1	3	-1	144202332	1447
ENSMUSG00000096225	protein_coding	Lhx8	ENSMUST00000204171	nonsense_mediated_decay		3	-1	154328166	876
ENSMUSG00000028266	protein_coding	Lmo4	ENSMUST00000196264	protein_coding		3	-1	144205220	1263
ENSMUSG00000096225	protein_coding	Lhx8	ENSMUST00000203692	retained_intron		3	-1	154324883	763
ENSMUSG00000038718	protein_coding	Pbx3	ENSMUST00000153278	nonsense_mediated_decay		2	-1	34371920	1063
ENSMUSG00000038718	protein_coding	Pbx3	ENSMUST00000143776	nonsense_mediated_decay		2	-1	34371920	950
ENSMUSG00000041096	protein_coding	Tspyl2	ENSMUST00000044509	protein_coding	principal1	X	-1	152342425	2696
ENSMUSG00000028266	protein_coding	Lmo4	ENSMUST00000148128	retained_intron		3	-1	144194818	812
ENSMUSG00000038718	protein_coding	Pbx3	ENSMUST00000175855	nonsense_mediated_decay		2	-1	34370846	621
ENSMUSG00000057219	protein_coding	Armc7	ENSMUST00000136985	processed_transcript		11	1	115475698	1009
ENSMUSG00000028266	protein_coding	Lmo4	ENSMUST00000197652	protein_coding		3	-1	144202963	571
ENSMUSG00000038718	protein_coding	Pbx3	ENSMUST00000138021	protein_coding		2	-1	34373142	447
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000129414	protein_coding	principal1	9	1	20643318	2114
ENSMUSG00000057219	protein_coding	Armc7	ENSMUST00000126533	processed_transcript		11	1	115475742	610
ENSMUSG00000096225	protein_coding	Lhx8	ENSMUST00000204403	protein_coding		3	-1	154328634	769
ENSMUSG00000028266	protein_coding	Lmo4	ENSMUST00000134961	retained_intron		3	-1	144205180	1630
ENSMUSG00000057219	protein_coding	Armc7	ENSMUST00000140181	processed_transcript		11	1	115475954	662
ENSMUSG00000041096	protein_coding	Tspyl2	ENSMUST00000178165	nonsense_mediated_decay		X	-1	152341844	841
ENSMUSG00000028266	protein_coding	Lmo4	ENSMUST00000124891	retained_intron		3	-1	144202300	482
ENSMUSG00000082343	unprocessed_pseudogene	Gm14404	ENSMUST00000119117	unprocessed_pseudogene		2	-1	177422936	1660
ENSMUSG00000038718	protein_coding	Pbx3	ENSMUST00000141653	protein_coding		2	-1	34371253	518
ENSMUSG00000057948	protein_coding	Unc13d	ENSMUST00000155120	processed_transcript		11	-1	116077961	991
ENSMUSG00000104969	sense_intronic	Gm43445	ENSMUST00000198564	sense_intronic		3	-1	144199262	2091
ENSMUSG00000038718	protein_coding	Pbx3	ENSMUST00000127353	protein_coding		2	-1	34371150	440
ENSMUSG00000057948	protein_coding	Unc13d	ENSMUST00000153408	protein_coding		11	-1	116077051	416
ENSMUSG00000041096	protein_coding	Tspyl2	ENSMUST00000177748	retained_intron		X	-1	152341801	391
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000160682	protein_coding	principal1	9	1	20644071	489
ENSMUSG00000083619	processed_pseudogene	Gm14414	ENSMUST00000120833	processed_pseudogene		2	1	177460275	573
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000161887	protein_coding		9	1	20644340	298
ENSMUSG00000057948	protein_coding	Unc13d	ENSMUST00000156545	protein_coding		11	-1	116077941	353
ENSMUSG00000038718	protein_coding	Pbx3	ENSMUST00000155423	retained_intron		2	-1	34371792	2858
ENSMUSG00000027823	protein_coding	Gmps	ENSMUST00000029405	protein_coding	principal1	3	1	63976106	8105
ENSMUSG00000042854	protein_coding	Trp53rkb	ENSMUST00000065753	protein_coding		2	1	166792531	1375
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000162303	protein_coding	principal1	9	1	20644821	505
ENSMUSG00000078866	protein_coding	Zfp970	ENSMUST00000108952	protein_coding	principal1	2	1	177464846	1569
ENSMUSG00000020672	protein_coding	Sntg2	ENSMUST00000142046	nonsense_mediated_decay		12	-1	30373328	2349
ENSMUSG00000118571	unprocessed_pseudogene	AL590969.1	ENSMUST00000239064	unprocessed_pseudogene		11	1	101366713	151
ENSMUSG00000078866	protein_coding	Zfp970	ENSMUST00000099002	protein_coding		2	1	177464733	794
ENSMUSG00000057948	protein_coding	Unc13d	ENSMUST00000075036	protein_coding	principal2	11	-1	116077961	3967
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000161595	retained_intron		9	1	20644834	642
ENSMUSG00000005069	protein_coding	Pex5	ENSMUST00000112530	protein_coding		6	-1	124414433	3051
ENSMUSG00000057948	protein_coding	Unc13d	ENSMUST00000106451	protein_coding	alternative2	11	-1	116077961	3973
ENSMUSG00000097963	processed_pseudogene	Gm27001	ENSMUST00000182252	processed_pseudogene		16	1	60628608	936
ENSMUSG00000115427	processed_pseudogene	Gm49174	ENSMUST00000226777	processed_pseudogene		14	1	74451559	526
ENSMUSG00000111600	processed_pseudogene	Gm8049	ENSMUST00000214336	processed_pseudogene		9	1	25450462	1782
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000161486	protein_coding		9	1	20644834	794
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000160874	nonsense_mediated_decay		9	1	20644835	412
ENSMUSG00000115449	lincRNA	Gm49175	ENSMUST00000227527	lincRNA		14	-1	74547547	449
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000161882	protein_coding		9	1	20644868	489
ENSMUSG00000009549	protein_coding	Srp14	ENSMUST00000009693	protein_coding	principal1	2	-1	118479711	798
ENSMUSG00000022584	protein_coding	Ly6c2	ENSMUST00000187864	retained_intron		15	-1	75111807	2680
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000160124	protein_coding	principal1	9	1	20645041	501
ENSMUSG00000094786	protein_coding	Gm14403	ENSMUST00000108947	protein_coding	principal1	2	1	177498315	1209
ENSMUSG00000042854	protein_coding	Trp53rkb	ENSMUST00000151826	protein_coding	principal1	2	1	166793767	4426
ENSMUSG00000042961	protein_coding	Egflam	ENSMUST00000058593	protein_coding	principal3	15	-1	7398304	4778
ENSMUSG00000084786	protein_coding	Ubl5	ENSMUST00000161834	retained_intron		9	1	20645218	491
ENSMUSG00000009549	protein_coding	Srp14	ENSMUST00000138189	processed_transcript		2	-1	118479648	765
ENSMUSG00000074892	protein_coding	B3galt5	ENSMUST00000113800	protein_coding	principal1	16	1	96235801	5282
ENSMUSG00000094786	protein_coding	Gm14403	ENSMUST00000142549	processed_transcript		2	1	177498215	701
ENSMUSG00000009549	protein_coding	Srp14	ENSMUST00000110862	protein_coding		2	-1	118479635	587
ENSMUSG00000042854	protein_coding	Trp53rkb	ENSMUST00000051923	processed_transcript		2	1	166793999	860
ENSMUSG00000094786	protein_coding	Gm14403	ENSMUST00000108940	protein_coding		2	1	177508570	774
ENSMUSG00000042961	protein_coding	Egflam	ENSMUST00000096494	protein_coding	alternative2	15	-1	7398351	4391
ENSMUSG00000009549	protein_coding	Srp14	ENSMUST00000149615	processed_transcript		2	-1	118478883	542
ENSMUSG00000084885	processed_transcript	3010001F23Rik	ENSMUST00000130625	processed_transcript		X	1	152368573	876
ENSMUSG00000105197	lincRNA	Gm43446	ENSMUST00000197669	lincRNA		3	1	144283811	1096
ENSMUSG00000074892	protein_coding	B3galt5	ENSMUST00000153586	processed_transcript		16	1	96273474	600
ENSMUSG00000101859	lincRNA	Gm29233	ENSMUST00000190311	lincRNA		2	-1	118124047	281
ENSMUSG00000074892	protein_coding	B3galt5	ENSMUST00000134058	processed_transcript		16	1	96273611	636
ENSMUSG00000106266	lincRNA	Gm43447	ENSMUST00000198471	lincRNA		3	1	144320214	1535
ENSMUSG00000022681	protein_coding	Ntan1	ENSMUST00000023362	protein_coding	principal1	16	1	13819251	1175
ENSMUSG00000026532	protein_coding	Spta1	ENSMUST00000027817	protein_coding	principal1	1	1	174172776	8406
ENSMUSG00000106416	processed_pseudogene	Gm5857	ENSMUST00000198953	processed_pseudogene		3	-1	144427672	493
ENSMUSG00000022584	protein_coding	Ly6c2	ENSMUST00000100542	protein_coding	principal1	15	-1	75111970	822
ENSMUSG00000038668	protein_coding	Lpar1	ENSMUST00000055018	protein_coding	principal1	4	-1	58553357	3512
ENSMUSG00000104906	TEC	Gm43005	ENSMUST00000199015	TEC		3	1	126662379	648
ENSMUSG00000005069	protein_coding	Pex5	ENSMUST00000112531	protein_coding	alternative2	6	-1	124414863	3075
ENSMUSG00000074892	protein_coding	B3galt5	ENSMUST00000099497	protein_coding	principal1	16	1	96280798	5147
ENSMUSG00000084885	processed_transcript	3010001F23Rik	ENSMUST00000148651	processed_transcript		X	1	152369028	456
ENSMUSG00000084885	processed_transcript	3010001F23Rik	ENSMUST00000145515	processed_transcript		X	1	152369028	858
ENSMUSG00000038668	protein_coding	Lpar1	ENSMUST00000107571	protein_coding	principal1	4	-1	58553311	3543
ENSMUSG00000084885	processed_transcript	3010001F23Rik	ENSMUST00000137460	processed_transcript		X	1	152369842	737
ENSMUSG00000005069	protein_coding	Pex5	ENSMUST00000080557	protein_coding	alternative2	6	-1	124415067	3073
ENSMUSG00000084885	processed_transcript	3010001F23Rik	ENSMUST00000157022	processed_transcript		X	1	152402596	718
ENSMUSG00000086679	antisense	Gm15551	ENSMUST00000132762	antisense		3	-1	126669044	535
ENSMUSG00000022584	protein_coding	Ly6c2	ENSMUST00000188214	protein_coding	principal1	15	-1	75111697	638
ENSMUSG00000038668	protein_coding	Lpar1	ENSMUST00000107575	protein_coding	principal1	4	-1	58553553	3421
ENSMUSG00000105378	TEC	Gm42515	ENSMUST00000199936	TEC		3	1	126737497	3583
ENSMUSG00000104903	sense_intronic	Gm43707	ENSMUST00000196451	sense_intronic		3	-1	144497172	3187
ENSMUSG00000105774	TEC	Gm43006	ENSMUST00000197702	TEC		3	1	126657722	1602
ENSMUSG00000022584	protein_coding	Ly6c2	ENSMUST00000191451	protein_coding	principal1	15	-1	75111937	538
ENSMUSG00000106057	sense_intronic	Gm43560	ENSMUST00000198100	sense_intronic		3	-1	144524001	773
ENSMUSG00000038668	protein_coding	Lpar1	ENSMUST00000107574	protein_coding	principal1	4	-1	58553628	3437
ENSMUSG00000005069	protein_coding	Pex5	ENSMUST00000035861	protein_coding	principal4	6	-1	124415037	3139
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000231042	nonsense_mediated_decay		15	-1	76607489	4340
ENSMUSG00000026532	protein_coding	Spta1	ENSMUST00000156092	retained_intron		1	1	174215485	4437
ENSMUSG00000038668	protein_coding	Lpar1	ENSMUST00000107570	protein_coding		4	-1	58499403	3244
ENSMUSG00000005069	protein_coding	Pex5	ENSMUST00000156415	retained_intron		6	-1	124399614	951
ENSMUSG00000038668	protein_coding	Lpar1	ENSMUST00000147354	protein_coding		4	-1	58553898	454
ENSMUSG00000038668	protein_coding	Lpar1	ENSMUST00000145361	protein_coding		4	-1	58553184	335
ENSMUSG00000005069	protein_coding	Pex5	ENSMUST00000150899	processed_transcript		6	-1	124414042	789
ENSMUSG00000038668	protein_coding	Lpar1	ENSMUST00000155170	protein_coding		4	-1	58548401	514
ENSMUSG00000005069	protein_coding	Pex5	ENSMUST00000150812	retained_intron		6	-1	124405367	609
ENSMUSG00000056679	protein_coding	Gpr173	ENSMUST00000070316	protein_coding	principal1	X	-1	152368704	4855
ENSMUSG00000117999	processed_pseudogene	Gm18217	ENSMUST00000237612	processed_pseudogene		18	1	59897554	541
ENSMUSG00000025083	protein_coding	Afap1l2	ENSMUST00000118800	protein_coding	alternative2	19	-1	57008198	3531
ENSMUSG00000118538	unprocessed_pseudogene	AC108942.1	ENSMUST00000238950	unprocessed_pseudogene		18	1	60183211	970
ENSMUSG00000005069	protein_coding	Pex5	ENSMUST00000112532	protein_coding	principal4	6	-1	124415067	3148
ENSMUSG00000056679	protein_coding	Gpr173	ENSMUST00000137840	processed_transcript		X	-1	152368704	998
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000134986	processed_transcript		X	1	135839034	880
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000085558	protein_coding		5	1	147957320	7543
ENSMUSG00000087235	transcribed_processed_pseudogene	Gm4750	ENSMUST00000152262	processed_transcript		X	1	152432477	2200
ENSMUSG00000025083	protein_coding	Afap1l2	ENSMUST00000111584	protein_coding	alternative2	19	-1	57008210	3597
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000016631	protein_coding	principal3	6	1	146888487	4851
ENSMUSG00000087235	transcribed_processed_pseudogene	Gm4750	ENSMUST00000151942	transcribed_processed_pseudogene		X	1	152432762	1142
ENSMUSG00000032308	protein_coding	Ulk3	ENSMUST00000053230	protein_coding	principal1	9	1	57589452	2826
ENSMUSG00000042961	protein_coding	Egflam	ENSMUST00000160207	nonsense_mediated_decay		15	-1	7398395	4420
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000129092	protein_coding		5	1	147957342	738
ENSMUSG00000032333	protein_coding	Stoml1	ENSMUST00000034883	protein_coding	principal1	9	1	58253164	1984
ENSMUSG00000091504	protein_coding	Vmn2r118	ENSMUST00000168440	protein_coding	principal1	17	-1	55625192	5053
ENSMUSG00000042961	protein_coding	Egflam	ENSMUST00000160314	retained_intron		15	-1	7223069	490
ENSMUSG00000087569	transcribed_processed_pseudogene	Actb-ps1	ENSMUST00000140208	processed_transcript		X	-1	152491860	2200
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000113136	protein_coding	principal1	X	1	135839056	3736
ENSMUSG00000040151	protein_coding	Hs2st1	ENSMUST00000043325	protein_coding	principal1	3	-1	144570181	6177
ENSMUSG00000032308	protein_coding	Ulk3	ENSMUST00000213212	retained_intron		9	1	57589578	404
ENSMUSG00000091504	protein_coding	Vmn2r118	ENSMUST00000234172	nonsense_mediated_decay		17	-1	55625192	5290
ENSMUSG00000073555	protein_coding	Gm4951	ENSMUST00000031549	protein_coding	principal1	18	1	60212080	2645
ENSMUSG00000087569	transcribed_processed_pseudogene	Actb-ps1	ENSMUST00000146697	transcribed_processed_pseudogene		X	-1	152491575	1142
ENSMUSG00000091504	protein_coding	Vmn2r118	ENSMUST00000234385	nonsense_mediated_decay		17	-1	55625192	4755
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000150797	processed_transcript		X	1	135839091	385
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000203730	protein_coding		6	1	146888509	530
ENSMUSG00000042961	protein_coding	Egflam	ENSMUST00000160273	retained_intron		15	-1	7398269	3327
ENSMUSG00000040151	protein_coding	Hs2st1	ENSMUST00000160690	nonsense_mediated_decay		3	-1	144569881	598
ENSMUSG00000091504	protein_coding	Vmn2r118	ENSMUST00000234082	nonsense_mediated_decay		17	-1	55625192	4700
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000132798	processed_transcript		X	1	135839104	375
ENSMUSG00000040151	protein_coding	Hs2st1	ENSMUST00000199680	retained_intron		3	-1	144570158	2321
ENSMUSG00000042961	protein_coding	Egflam	ENSMUST00000162105	processed_transcript		15	-1	7254768	446
ENSMUSG00000032308	protein_coding	Ulk3	ENSMUST00000215748	nonsense_mediated_decay		9	1	57590345	312
ENSMUSG00000085977	processed_pseudogene	Gm5970	ENSMUST00000131638	processed_pseudogene		18	1	60220843	1216
ENSMUSG00000042961	protein_coding	Egflam	ENSMUST00000159726	retained_intron		15	-1	7398261	618
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000149336	retained_intron		5	1	148082888	2555
ENSMUSG00000083948	processed_pseudogene	Gm7158	ENSMUST00000120079	processed_pseudogene		X	-1	152545155	903
ENSMUSG00000032333	protein_coding	Stoml1	ENSMUST00000215488	nonsense_mediated_decay		9	1	58253184	379
ENSMUSG00000032308	protein_coding	Ulk3	ENSMUST00000215868	retained_intron		9	1	57590364	777
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000111623	protein_coding	alternative2	6	1	146888589	4782
ENSMUSG00000091863	protein_coding	Cldn34a	ENSMUST00000238455	protein_coding	principal1	X	1	152537501	1050
ENSMUSG00000032308	protein_coding	Ulk3	ENSMUST00000215146	retained_intron		9	1	57590634	761
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000128423	processed_transcript		5	1	148094256	327
ENSMUSG00000033213	protein_coding	AA467197	ENSMUST00000142767	protein_coding		2	1	122636986	519
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000201594	retained_intron		5	1	148235992	3181
ENSMUSG00000032308	protein_coding	Ulk3	ENSMUST00000213530	retained_intron		9	1	57592020	750
ENSMUSG00000091863	protein_coding	Cldn34a	ENSMUST00000164764	protein_coding	principal1	X	1	152563334	636
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000207416	nonsense_mediated_decay		7	-1	44864940	657
ENSMUSG00000032333	protein_coding	Stoml1	ENSMUST00000217165	nonsense_mediated_decay		9	1	58253188	397
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000204660	protein_coding		6	1	146976483	547
ENSMUSG00000032308	protein_coding	Ulk3	ENSMUST00000217100	retained_intron		9	1	57593477	584
ENSMUSG00000116438	processed_pseudogene	Gm18911	ENSMUST00000229341	processed_pseudogene		15	1	77701997	1048
ENSMUSG00000100016	protein_coding	Olfr1215	ENSMUST00000216271	protein_coding	principal1	2	-1	89006973	2608
ENSMUSG00000081993	processed_pseudogene	Gm8475	ENSMUST00000118211	processed_pseudogene		X	1	152565212	526
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000141953	processed_transcript		X	1	135839106	617
ENSMUSG00000100016	protein_coding	Olfr1215	ENSMUST00000214809	protein_coding	principal1	2	-1	89006973	2683
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000154221	protein_coding		6	1	146992480	727
ENSMUSG00000116162	antisense	Gm36329	ENSMUST00000230236	antisense		15	-1	77722849	596
ENSMUSG00000036160	protein_coding	Surf6	ENSMUST00000140392	processed_transcript		2	-1	26892611	1372
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000110515	protein_coding	principal1	5	1	148265217	1792
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000142034	processed_transcript		X	1	135839774	661
ENSMUSG00000100016	protein_coding	Olfr1215	ENSMUST00000188399	protein_coding	principal1	2	-1	89002290	943
ENSMUSG00000032333	protein_coding	Stoml1	ENSMUST00000216877	nonsense_mediated_decay		9	1	58253192	2236
ENSMUSG00000036160	protein_coding	Surf6	ENSMUST00000129554	processed_transcript		2	-1	26892173	653
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000126774	processed_transcript		6	1	146996442	700
ENSMUSG00000071716	protein_coding	Apol7e	ENSMUST00000229450	retained_intron		15	1	77698857	472
ENSMUSG00000033213	protein_coding	AA467197	ENSMUST00000047498	protein_coding	principal1	2	1	122637850	792
ENSMUSG00000032333	protein_coding	Stoml1	ENSMUST00000215079	retained_intron		9	1	58254621	770
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000137392	retained_intron		X	1	135839978	776
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000143383	processed_transcript		3	1	126596302	206
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000071878	protein_coding		5	1	148265288	1211
ENSMUSG00000032333	protein_coding	Stoml1	ENSMUST00000216187	retained_intron		9	1	58254841	578
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000130034	retained_intron		X	1	135840252	813
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000148658	processed_transcript		X	1	135840393	388
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000146425	nonsense_mediated_decay		5	1	148265292	1131
ENSMUSG00000020672	protein_coding	Sntg2	ENSMUST00000021004	protein_coding	principal1	12	-1	30373375	2411
ENSMUSG00000032333	protein_coding	Stoml1	ENSMUST00000217026	retained_intron		9	1	58256124	859
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000207303	retained_intron		7	-1	44866774	2932
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000138251	retained_intron		X	1	135840563	619
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000110514	protein_coding		5	1	148265345	1532
ENSMUSG00000032333	protein_coding	Stoml1	ENSMUST00000216864	nonsense_mediated_decay		9	1	58260227	641
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000152105	protein_coding		5	1	148303165	585
ENSMUSG00000033213	protein_coding	AA467197	ENSMUST00000175727	processed_transcript		2	1	122637915	523
ENSMUSG00000085513	unprocessed_pseudogene	Gm16363	ENSMUST00000132460	unprocessed_pseudogene		2	-1	177542557	877
ENSMUSG00000072966	protein_coding	Gprasp2	ENSMUST00000173804	protein_coding	principal1	X	1	135839034	3814
ENSMUSG00000020672	protein_coding	Sntg2	ENSMUST00000149710	nonsense_mediated_decay		12	-1	30373265	1667
ENSMUSG00000042032	protein_coding	Mat2b	ENSMUST00000040167	protein_coding	principal3	11	-1	40692774	1949
ENSMUSG00000078865	protein_coding	Gm14406	ENSMUST00000108945	protein_coding	principal1	2	-1	177578199	1348
ENSMUSG00000036160	protein_coding	Surf6	ENSMUST00000137904	processed_transcript		2	-1	26899425	680
ENSMUSG00000022681	protein_coding	Ntan1	ENSMUST00000145248	processed_transcript		16	1	13819277	549
ENSMUSG00000020672	protein_coding	Sntg2	ENSMUST00000133324	nonsense_mediated_decay		12	-1	30373328	1830
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000109272	protein_coding	principal2	13	1	111686178	5279
ENSMUSG00000029651	protein_coding	Mtus2	ENSMUST00000085554	protein_coding		5	1	148303174	1009
ENSMUSG00000078865	protein_coding	Gm14406	ENSMUST00000108943	protein_coding		2	-1	177578210	531
ENSMUSG00000071716	protein_coding	Apol7e	ENSMUST00000096358	protein_coding	principal1	15	1	77698905	2208
ENSMUSG00000020672	protein_coding	Sntg2	ENSMUST00000130062	retained_intron		12	-1	30201335	647
ENSMUSG00000066554	processed_pseudogene	Gm10167	ENSMUST00000150411	processed_pseudogene		5	-1	148184377	1479
ENSMUSG00000033213	protein_coding	AA467197	ENSMUST00000110512	protein_coding	principal1	2	1	122637915	751
ENSMUSG00000042032	protein_coding	Mat2b	ENSMUST00000101347	protein_coding	alternative1	11	-1	40695203	2053
ENSMUSG00000107033	TEC	Gm43553	ENSMUST00000200900	TEC		5	1	148206228	685
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000231979	protein_coding		13	1	111686248	598
ENSMUSG00000115926	processed_pseudogene	Gm8233	ENSMUST00000229088	processed_pseudogene		15	1	77701124	552
ENSMUSG00000093738	processed_transcript	AI606473	ENSMUST00000177201	lincRNA		3	1	154330821	1731
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000146726	retained_intron		13	1	111686325	631
ENSMUSG00000093738	processed_transcript	AI606473	ENSMUST00000181234	retained_intron		3	1	154331997	802
ENSMUSG00000020672	protein_coding	Sntg2	ENSMUST00000156953	processed_transcript		12	-1	30357683	552
ENSMUSG00000080709	unprocessed_pseudogene	Gm14324	ENSMUST00000121358	unprocessed_pseudogene		2	1	177734300	3051
ENSMUSG00000022681	protein_coding	Ntan1	ENSMUST00000124604	processed_transcript		16	1	13819299	773
ENSMUSG00000020672	protein_coding	Sntg2	ENSMUST00000218723	processed_transcript		12	-1	30373295	512
ENSMUSG00000057672	protein_coding	Pkn1	ENSMUST00000005616	protein_coding	principal3	8	-1	83699179	6662
ENSMUSG00000020672	protein_coding	Sntg2	ENSMUST00000125530	processed_transcript		12	-1	30373343	688
ENSMUSG00000024248	protein_coding	Cox7a2l	ENSMUST00000025095	protein_coding	principal1	17	-1	83514330	1076
ENSMUSG00000042032	protein_coding	Mat2b	ENSMUST00000141830	nonsense_mediated_decay		11	-1	40692621	887
ENSMUSG00000022681	protein_coding	Ntan1	ENSMUST00000136618	processed_transcript		16	1	13819306	1014
ENSMUSG00000020672	protein_coding	Sntg2	ENSMUST00000218489	processed_transcript		12	-1	30373320	365
ENSMUSG00000042032	protein_coding	Mat2b	ENSMUST00000137797	retained_intron		11	-1	40685227	800
ENSMUSG00000022681	protein_coding	Ntan1	ENSMUST00000115805	protein_coding		16	1	13819325	984
ENSMUSG00000105992	TEC	Gm43651	ENSMUST00000199796	TEC		3	1	116532149	439
ENSMUSG00000082394	processed_pseudogene	Gm4596	ENSMUST00000117197	processed_pseudogene		3	-1	116528578	442
ENSMUSG00000042032	protein_coding	Mat2b	ENSMUST00000156867	retained_intron		11	-1	40685817	732
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000137268	nonsense_mediated_decay		13	1	111686326	5165
ENSMUSG00000022681	protein_coding	Ntan1	ENSMUST00000141791	retained_intron		16	1	13819344	442
ENSMUSG00000042032	protein_coding	Mat2b	ENSMUST00000109307	retained_intron		11	-1	40692628	2461
ENSMUSG00000024248	protein_coding	Cox7a2l	ENSMUST00000167741	protein_coding		17	-1	83514330	1129
ENSMUSG00000057672	protein_coding	Pkn1	ENSMUST00000144258	protein_coding	alternative1	8	-1	83694060	2995
ENSMUSG00000085665	processed_transcript	Gm12059	ENSMUST00000128996	processed_transcript		11	1	23067998	3105
ENSMUSG00000022681	protein_coding	Ntan1	ENSMUST00000123849	retained_intron		16	1	13827448	597
ENSMUSG00000042032	protein_coding	Mat2b	ENSMUST00000135617	retained_intron		11	-1	40694987	644
ENSMUSG00000022681	protein_coding	Ntan1	ENSMUST00000139161	retained_intron		16	1	13834082	745
ENSMUSG00000024248	protein_coding	Cox7a2l	ENSMUST00000235085	retained_intron		17	-1	83504506	903
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000123902	retained_intron		6	1	146999545	5118
ENSMUSG00000081103	processed_pseudogene	Rps12-ps26	ENSMUST00000117751	processed_pseudogene		11	-1	107172232	333
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000232560	processed_transcript		13	1	111686333	661
ENSMUSG00000087596	antisense	Gm11715	ENSMUST00000129501	antisense		11	1	107157408	695
ENSMUSG00000034997	protein_coding	Htr2a	ENSMUST00000036653	protein_coding	principal1	14	1	74640840	5606
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000149203	retained_intron		6	1	147000315	3915
ENSMUSG00000024248	protein_coding	Cox7a2l	ENSMUST00000234258	processed_transcript		17	-1	83517330	592
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000133825	retained_intron		6	1	147001694	724
ENSMUSG00000043384	protein_coding	Gprasp1	ENSMUST00000149595	processed_transcript		X	1	135742733	837
ENSMUSG00000025083	protein_coding	Afap1l2	ENSMUST00000122359	protein_coding	principal3	19	-1	57008228	3667
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000047412	protein_coding	alternative2	13	1	111686351	4243
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000155415	protein_coding		6	1	147002243	761
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000109271	protein_coding		13	1	111686351	4143
ENSMUSG00000057672	protein_coding	Pkn1	ENSMUST00000132945	nonsense_mediated_decay		8	-1	83699097	3005
ENSMUSG00000059540	protein_coding	Tcea2	ENSMUST00000103042	protein_coding	principal1	2	1	181680310	1183
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000204028	retained_intron		6	1	147005108	1218
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000231713	processed_transcript		13	1	111686902	16
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000231466	processed_transcript		13	1	111687499	18
ENSMUSG00000016487	protein_coding	Ppfibp1	ENSMUST00000136837	protein_coding		6	1	147010879	579
ENSMUSG00000059540	protein_coding	Tcea2	ENSMUST00000129745	protein_coding		2	1	181681190	1045
ENSMUSG00000032727	protein_coding	Mier3	ENSMUST00000232398	processed_transcript		13	1	111700785	597
ENSMUSG00000025083	protein_coding	Afap1l2	ENSMUST00000155467	retained_intron		19	-1	56928553	776
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000046575	protein_coding	principal1	7	-1	44869788	1883
ENSMUSG00000060621	protein_coding	Nkpd1	ENSMUST00000207576	protein_coding	principal2	7	1	19517838	2916
ENSMUSG00000059540	protein_coding	Tcea2	ENSMUST00000129006	protein_coding		2	1	181682885	1053
ENSMUSG00000084120	processed_pseudogene	Gm11624	ENSMUST00000118579	processed_pseudogene		11	-1	105034074	1041
ENSMUSG00000080694	processed_pseudogene	Gm11621	ENSMUST00000118253	processed_pseudogene		11	1	104928216	589
ENSMUSG00000107969	antisense	Gm44085	ENSMUST00000205056	antisense		6	-1	146994024	372
ENSMUSG00000025899	protein_coding	Alkbh8	ENSMUST00000212294	protein_coding	alternative2	9	1	3335140	2584
ENSMUSG00000057672	protein_coding	Pkn1	ENSMUST00000128523	retained_intron		8	-1	83675567	3070
ENSMUSG00000036160	protein_coding	Surf6	ENSMUST00000047632	protein_coding	principal1	2	-1	26902879	2971
ENSMUSG00000060621	protein_coding	Nkpd1	ENSMUST00000214205	protein_coding	alternative2	7	1	19518731	2309
ENSMUSG00000078864	protein_coding	Gm14322	ENSMUST00000148388	processed_transcript		2	1	177759288	744
ENSMUSG00000078864	protein_coding	Gm14322	ENSMUST00000119838	protein_coding	principal1	2	1	177762898	1077
ENSMUSG00000107814	processed_pseudogene	Gm35876	ENSMUST00000205044	processed_pseudogene		6	1	147028001	459
ENSMUSG00000025899	protein_coding	Alkbh8	ENSMUST00000211884	retained_intron		9	1	3335473	852
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000208687	retained_intron		7	-1	44863973	631
ENSMUSG00000057672	protein_coding	Pkn1	ENSMUST00000138898	processed_transcript		8	-1	83671780	548
ENSMUSG00000025083	protein_coding	Afap1l2	ENSMUST00000148049	protein_coding		19	-1	57008228	1724
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000112524	protein_coding	principal2	9	-1	106247730	3089
ENSMUSG00000059540	protein_coding	Tcea2	ENSMUST00000126623	processed_transcript		2	1	181683166	541
ENSMUSG00000060621	protein_coding	Nkpd1	ENSMUST00000078908	protein_coding	principal2	7	1	19518731	2753
ENSMUSG00000078864	protein_coding	Gm14322	ENSMUST00000108942	protein_coding		2	1	177768044	1074
ENSMUSG00000057672	protein_coding	Pkn1	ENSMUST00000124946	retained_intron		8	-1	83673599	483
ENSMUSG00000036160	protein_coding	Surf6	ENSMUST00000114043	protein_coding		2	-1	26902850	894
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000208410	protein_coding		7	-1	44864980	395
ENSMUSG00000115288	processed_pseudogene	Gm9212	ENSMUST00000226155	processed_pseudogene		14	1	74717712	1119
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000209018	protein_coding		7	-1	44867083	219
ENSMUSG00000025083	protein_coding	Afap1l2	ENSMUST00000126964	protein_coding		19	-1	57001046	681
ENSMUSG00000025083	protein_coding	Afap1l2	ENSMUST00000225394	protein_coding		19	-1	56937238	93
ENSMUSG00000057672	protein_coding	Pkn1	ENSMUST00000146057	processed_transcript		8	-1	83677835	450
ENSMUSG00000086366	lincRNA	1700061J23Rik	ENSMUST00000141678	lincRNA		11	1	23152140	537
ENSMUSG00000085135	antisense	Gm13713	ENSMUST00000155472	antisense		2	1	85160778	285
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000207363	protein_coding		7	-1	44864835	410
ENSMUSG00000059540	protein_coding	Tcea2	ENSMUST00000136145	retained_intron		2	1	181683575	1118
ENSMUSG00000043384	protein_coding	Gprasp1	ENSMUST00000113144	protein_coding	principal1	X	1	135742733	5843
ENSMUSG00000085135	antisense	Gm13713	ENSMUST00000139377	antisense		2	1	85160778	703
ENSMUSG00000036160	protein_coding	Surf6	ENSMUST00000142131	processed_transcript		2	-1	26902790	748
ENSMUSG00000118122	lincRNA	Gm50405	ENSMUST00000235914	lincRNA		18	1	35923295	668
ENSMUSG00000036160	protein_coding	Surf6	ENSMUST00000127691	processed_transcript		2	-1	26899768	372
ENSMUSG00000025899	protein_coding	Alkbh8	ENSMUST00000212358	nonsense_mediated_decay		9	1	3335478	2687
ENSMUSG00000057672	protein_coding	Pkn1	ENSMUST00000133195	retained_intron		8	-1	83681589	694
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000141118	protein_coding	principal2	9	-1	106248654	3399
ENSMUSG00000025083	protein_coding	Afap1l2	ENSMUST00000132851	retained_intron		19	-1	57008208	1327
ENSMUSG00000040838	protein_coding	Gm11639	ENSMUST00000148007	protein_coding		11	1	104685707	3613
ENSMUSG00000043384	protein_coding	Gprasp1	ENSMUST00000113147	protein_coding	principal1	X	1	135742733	5611
ENSMUSG00000086905	antisense	Gm13716	ENSMUST00000126401	antisense		2	1	85196932	808
ENSMUSG00000059540	protein_coding	Tcea2	ENSMUST00000125892	retained_intron		2	1	181683601	960
ENSMUSG00000057672	protein_coding	Pkn1	ENSMUST00000135356	retained_intron		8	-1	83699167	1783
ENSMUSG00000059540	protein_coding	Tcea2	ENSMUST00000126844	processed_transcript		2	1	181687516	356
ENSMUSG00000043384	protein_coding	Gprasp1	ENSMUST00000113145	protein_coding	principal1	X	1	135742733	5640
ENSMUSG00000115762	lincRNA	Gm34907	ENSMUST00000227693	lincRNA		14	1	103463919	486
ENSMUSG00000115762	lincRNA	Gm34907	ENSMUST00000228094	lincRNA		14	1	103464007	426
ENSMUSG00000043384	protein_coding	Gprasp1	ENSMUST00000143034	processed_transcript		X	1	135742735	2361
ENSMUSG00000115762	lincRNA	Gm34907	ENSMUST00000228400	lincRNA		14	1	103464051	339
ENSMUSG00000043384	protein_coding	Gprasp1	ENSMUST00000166554	protein_coding	principal1	X	1	135797588	4993
ENSMUSG00000040838	protein_coding	Gm11639	ENSMUST00000212287	protein_coding	principal1	11	1	104685707	17665
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000207393	retained_intron		7	-1	44867454	1051
ENSMUSG00000075224	protein_coding	Lrrc55	ENSMUST00000234905	nonsense_mediated_decay		2	-1	85196699	2217
ENSMUSG00000025899	protein_coding	Alkbh8	ENSMUST00000053407	protein_coding	principal2	9	1	3335478	3603
ENSMUSG00000036687	protein_coding	Tmem184a	ENSMUST00000110832	protein_coding	principal3	5	-1	139813243	4326
ENSMUSG00000022512	protein_coding	Cldn1	ENSMUST00000023154	protein_coding	principal1	16	-1	26371841	3247
ENSMUSG00000032375	protein_coding	Aph1b	ENSMUST00000034934	protein_coding	principal1	9	-1	66795490	4910
ENSMUSG00000051403	protein_coding	Ppp1r37	ENSMUST00000209190	retained_intron		7	-1	19532982	1792
ENSMUSG00000019464	protein_coding	Ptger1	ENSMUST00000019608	protein_coding	principal1	8	1	83666678	4694
ENSMUSG00000000340	protein_coding	Dbt	ENSMUST00000000349	protein_coding	principal1	3	1	116513070	3301
ENSMUSG00000019464	protein_coding	Ptger1	ENSMUST00000159935	retained_intron		8	1	83666833	3474
ENSMUSG00000022512	protein_coding	Cldn1	ENSMUST00000232215	retained_intron		16	-1	26360794	4145
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000208991	retained_intron		7	-1	44864943	862
ENSMUSG00000075224	protein_coding	Lrrc55	ENSMUST00000234267	protein_coding		2	-1	85197197	3860
ENSMUSG00000075224	protein_coding	Lrrc55	ENSMUST00000099930	protein_coding	principal1	2	-1	85196699	2217
ENSMUSG00000040838	protein_coding	Gm11639	ENSMUST00000175713	processed_transcript		11	1	104704358	407
ENSMUSG00000019464	protein_coding	Ptger1	ENSMUST00000212519	processed_transcript		8	1	83667142	884
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000208765	retained_intron		7	-1	44865509	897
ENSMUSG00000081513	processed_pseudogene	Gm11623	ENSMUST00000120176	processed_pseudogene		11	1	104814416	1225
ENSMUSG00000110903	TEC	Gm47857	ENSMUST00000213353	TEC		10	1	43363010	3879
ENSMUSG00000075224	protein_coding	Lrrc55	ENSMUST00000111601	protein_coding	principal1	2	-1	85196699	2900
ENSMUSG00000025899	protein_coding	Alkbh8	ENSMUST00000211933	protein_coding	principal2	9	1	3335478	7674
ENSMUSG00000037112	protein_coding	Sik2	ENSMUST00000176824	protein_coding	alternative2	9	-1	51008936	5369
ENSMUSG00000082767	processed_pseudogene	Gm11622	ENSMUST00000120525	processed_pseudogene		11	1	105031157	691
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000208682	protein_coding		7	-1	44869406	817
ENSMUSG00000000340	protein_coding	Dbt	ENSMUST00000197201	protein_coding		3	1	116513119	446
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000133617	nonsense_mediated_decay		9	-1	106247852	1902
ENSMUSG00000043088	protein_coding	Il17re	ENSMUST00000058548	protein_coding	principal2	6	1	113458484	2940
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000176774	protein_coding	alternative2	2	-1	92370986	2377
ENSMUSG00000089673	processed_pseudogene	Gm16546	ENSMUST00000159442	processed_pseudogene		10	1	43319360	355
ENSMUSG00000094955	processed_pseudogene	Gm3699	ENSMUST00000178135	processed_pseudogene		10	-1	43456501	75
ENSMUSG00000032375	protein_coding	Aph1b	ENSMUST00000168309	nonsense_mediated_decay		9	-1	66795436	5102
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000074082	protein_coding	alternative2	9	-1	106247856	2129
ENSMUSG00000025899	protein_coding	Alkbh8	ENSMUST00000212666	protein_coding		9	1	3335493	369
ENSMUSG00000089839	processed_pseudogene	Rps19-ps11	ENSMUST00000160308	processed_pseudogene		10	-1	43373920	433
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000209139	processed_transcript		7	-1	44869057	771
ENSMUSG00000043088	protein_coding	Il17re	ENSMUST00000204523	retained_intron		6	1	113458761	2114
ENSMUSG00000000340	protein_coding	Dbt	ENSMUST00000199614	nonsense_mediated_decay		3	1	116513128	583
ENSMUSG00000085025	lincRNA	Gm13715	ENSMUST00000136578	lincRNA		2	1	85233675	411
ENSMUSG00000032375	protein_coding	Aph1b	ENSMUST00000113730	protein_coding		9	-1	66795376	682
ENSMUSG00000110772	TEC	Gm47856	ENSMUST00000216518	TEC		10	1	43412531	1232
ENSMUSG00000081014	processed_pseudogene	Gm13714	ENSMUST00000117313	processed_pseudogene		2	-1	85268233	221
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000209003	retained_intron		7	-1	44867406	888
ENSMUSG00000043088	protein_coding	Il17re	ENSMUST00000203661	protein_coding	alternative2	6	1	113458807	2118
ENSMUSG00000000340	protein_coding	Dbt	ENSMUST00000196376	retained_intron		3	1	116520328	460
ENSMUSG00000025899	protein_coding	Alkbh8	ENSMUST00000212154	protein_coding		9	1	3335511	761
ENSMUSG00000038502	protein_coding	Ptov1	ENSMUST00000208655	retained_intron		7	-1	44867610	324
ENSMUSG00000043088	protein_coding	Il17re	ENSMUST00000204774	protein_coding	alternative2	6	1	113458834	2146
ENSMUSG00000025899	protein_coding	Alkbh8	ENSMUST00000212817	nonsense_mediated_decay		9	1	3335736	750
ENSMUSG00000072969	protein_coding	Armcx5	ENSMUST00000096321	protein_coding	principal1	X	1	135742733	2779
ENSMUSG00000025899	protein_coding	Alkbh8	ENSMUST00000212955	processed_transcript		9	1	3379207	3076
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000134053	processed_transcript		9	-1	106243634	1905
ENSMUSG00000040269	protein_coding	Mrps28	ENSMUST00000042148	protein_coding	principal1	3	-1	8923918	783
ENSMUSG00000072969	protein_coding	Armcx5	ENSMUST00000128847	retained_intron		X	1	135742735	2329
ENSMUSG00000037112	protein_coding	Sik2	ENSMUST00000176663	protein_coding	alternative2	9	-1	51008936	4107
ENSMUSG00000036687	protein_coding	Tmem184a	ENSMUST00000044002	protein_coding	alternative2	5	-1	139814283	2039
ENSMUSG00000033717	protein_coding	Adra2a	ENSMUST00000036700	protein_coding	principal1	19	1	54044151	4832
ENSMUSG00000115514	processed_pseudogene	Gm49009	ENSMUST00000226762	processed_pseudogene		14	1	78762103	617
ENSMUSG00000025899	protein_coding	Alkbh8	ENSMUST00000165105	protein_coding	principal2	9	1	3338445	2256
ENSMUSG00000081594	processed_pseudogene	Gm15467	ENSMUST00000120582	processed_pseudogene		3	1	8881199	445
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000143125	nonsense_mediated_decay		9	-1	106238730	794
ENSMUSG00000037112	protein_coding	Sik2	ENSMUST00000176491	nonsense_mediated_decay		9	-1	51008973	3576
ENSMUSG00000081657	processed_pseudogene	Gm15466	ENSMUST00000122299	processed_pseudogene		3	-1	8882570	333
ENSMUSG00000115305	processed_pseudogene	Gm30584	ENSMUST00000226349	processed_pseudogene		14	1	78820981	217
ENSMUSG00000033717	protein_coding	Adra2a	ENSMUST00000237285	protein_coding	principal1	19	1	54045260	3592
ENSMUSG00000031250	protein_coding	Tnmd	ENSMUST00000033602	protein_coding	principal1	X	1	133850980	1353
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000123115	retained_intron		9	-1	106237084	807
ENSMUSG00000036687	protein_coding	Tmem184a	ENSMUST00000132677	retained_intron		5	-1	139807980	627
ENSMUSG00000020690	protein_coding	Efcab3	ENSMUST00000136876	protein_coding		11	1	105063592	666
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000214989	protein_coding		9	-1	106238760	500
ENSMUSG00000115290	processed_pseudogene	Gm19098	ENSMUST00000226127	processed_pseudogene		14	-1	78831270	1945
ENSMUSG00000036687	protein_coding	Tmem184a	ENSMUST00000146780	protein_coding		5	-1	139814042	376
ENSMUSG00000089781	antisense	Gm15756	ENSMUST00000161447	antisense		6	-1	90599948	670
ENSMUSG00000056777	processed_pseudogene	Rpl21-ps13	ENSMUST00000072532	processed_pseudogene		7	1	139719399	483
ENSMUSG00000117237	processed_pseudogene	Gm18648	ENSMUST00000233377	processed_pseudogene		17	1	55700407	1411
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000123601	retained_intron		9	-1	106240033	878
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000214249	retained_intron		9	-1	106247867	1693
ENSMUSG00000109905	processed_pseudogene	Gm7380	ENSMUST00000211599	processed_pseudogene		7	1	139774714	466
ENSMUSG00000036687	protein_coding	Tmem184a	ENSMUST00000147328	protein_coding		5	-1	139819917	355
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000219340	retained_intron		9	-1	106247870	1718
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000219129	protein_coding		9	-1	106247769	1546
ENSMUSG00000037112	protein_coding	Sik2	ENSMUST00000041375	protein_coding	principal2	9	-1	51009073	3552
ENSMUSG00000032786	protein_coding	Alas1	ENSMUST00000215222	protein_coding		9	-1	106248157	460
ENSMUSG00000030088	protein_coding	Aldh1l1	ENSMUST00000127199	processed_transcript		6	1	90486427	400
ENSMUSG00000045180	protein_coding	Shroom2	ENSMUST00000137217	processed_transcript		X	-1	152644543	4338
ENSMUSG00000020686	protein_coding	Gas2l2	ENSMUST00000052521	protein_coding	principal1	11	-1	83429455	2610
ENSMUSG00000095362	protein_coding	Gm14325	ENSMUST00000108939	protein_coding	principal1	2	-1	177840318	1576
ENSMUSG00000097592	antisense	4930500F10Rik	ENSMUST00000180701	antisense		9	1	106247960	1224
ENSMUSG00000081813	processed_pseudogene	Gm12806	ENSMUST00000119384	processed_pseudogene		4	1	110510035	268
ENSMUSG00000095362	protein_coding	Gm14325	ENSMUST00000150650	protein_coding		2	-1	177840336	310
ENSMUSG00000081068	processed_pseudogene	Gm12804	ENSMUST00000121030	processed_pseudogene		4	1	111290118	999
ENSMUSG00000095362	protein_coding	Gm14325	ENSMUST00000188914	protein_coding		2	-1	177834646	1494
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000068586	protein_coding	principal3	2	-1	92371057	2445
ENSMUSG00000081574	unprocessed_pseudogene	Gm14429	ENSMUST00000121881	unprocessed_pseudogene		2	-1	177855503	2024
ENSMUSG00000020686	protein_coding	Gas2l2	ENSMUST00000147301	nonsense_mediated_decay		11	-1	83429455	2563
ENSMUSG00000114050	antisense	Gm47666	ENSMUST00000222646	antisense		12	-1	83731457	395
ENSMUSG00000040152	protein_coding	Thbs1	ENSMUST00000039559	protein_coding	principal1	2	1	118111876	5848
ENSMUSG00000082901	processed_pseudogene	Rps8-ps5	ENSMUST00000122418	processed_pseudogene		2	1	177892638	627
ENSMUSG00000051403	protein_coding	Ppp1r37	ENSMUST00000058444	protein_coding	principal1	7	-1	19563076	3816
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000071898	protein_coding	principal1	15	-1	76607591	4518
ENSMUSG00000040152	protein_coding	Thbs1	ENSMUST00000142588	retained_intron		2	1	118122940	659
ENSMUSG00000116132	antisense	Gm49428	ENSMUST00000229164	antisense		15	1	101690309	765
ENSMUSG00000116853	processed_pseudogene	Gm49609	ENSMUST00000231440	processed_pseudogene		16	-1	60636586	155
ENSMUSG00000051403	protein_coding	Ppp1r37	ENSMUST00000208678	retained_intron		7	-1	19531803	655
ENSMUSG00000075223	protein_coding	Olfr987	ENSMUST00000216347	protein_coding	principal1	2	-1	85339315	1453
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000230157	protein_coding		15	-1	76607511	4410
ENSMUSG00000020690	protein_coding	Efcab3	ENSMUST00000137086	protein_coding		11	1	105066838	1236
ENSMUSG00000074529	protein_coding	Zfp972	ENSMUST00000108934	protein_coding		2	-1	177925604	561
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000229287	protein_coding		15	-1	76596698	439
ENSMUSG00000074529	protein_coding	Zfp972	ENSMUST00000081529	protein_coding	principal1	2	-1	177925613	472
ENSMUSG00000061360	protein_coding	Phf5a	ENSMUST00000023117	protein_coding	principal1	15	-1	81871911	1663
ENSMUSG00000074529	protein_coding	Zfp972	ENSMUST00000108986	protein_coding		2	-1	177921815	192
ENSMUSG00000102098	lincRNA	2310016D03Rik	ENSMUST00000190206	lincRNA		12	-1	30467358	1547
ENSMUSG00000075223	protein_coding	Olfr987	ENSMUST00000099929	protein_coding	principal1	2	-1	85331971	1075
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000230903	retained_intron		15	-1	76601016	2904
ENSMUSG00000074521	protein_coding	Gm14327	ENSMUST00000108935	protein_coding	principal1	2	1	177897096	1451
ENSMUSG00000112665	processed_pseudogene	Ryk-ps1	ENSMUST00000219713	processed_pseudogene		12	1	30486755	235
ENSMUSG00000074521	protein_coding	Gm14327	ENSMUST00000099001	protein_coding		2	1	177904285	192
ENSMUSG00000100674	lincRNA	Gm28806	ENSMUST00000191134	lincRNA		12	-1	30487052	528
ENSMUSG00000037112	protein_coding	Sik2	ENSMUST00000068484	processed_transcript		9	-1	51009026	654
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000231009	retained_intron		15	-1	76597812	1246
ENSMUSG00000061360	protein_coding	Phf5a	ENSMUST00000230134	processed_transcript		15	-1	81867597	854
ENSMUSG00000037112	protein_coding	Sik2	ENSMUST00000177203	processed_transcript		9	-1	51008984	2991
ENSMUSG00000018143	protein_coding	Mafk	ENSMUST00000018287	protein_coding	principal1	5	1	139791513	2849
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000229367	retained_intron		15	-1	76597902	849
ENSMUSG00000075223	protein_coding	Olfr987	ENSMUST00000111598	protein_coding	principal1	2	-1	85339295	1418
ENSMUSG00000037112	protein_coding	Sik2	ENSMUST00000177346	retained_intron		9	-1	51009000	2183
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000229798	processed_transcript		15	-1	76598825	764
ENSMUSG00000037112	protein_coding	Sik2	ENSMUST00000176327	retained_intron		9	-1	51009011	476
ENSMUSG00000061360	protein_coding	Phf5a	ENSMUST00000160415	processed_transcript		15	-1	81871665	471
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000130283	retained_intron		2	-1	92371036	5029
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000230149	retained_intron		15	-1	76597965	699
ENSMUSG00000110239	lincRNA	Gm45620	ENSMUST00000209980	lincRNA		7	-1	101347984	468
ENSMUSG00000018143	protein_coding	Mafk	ENSMUST00000151577	processed_transcript		5	1	139791534	541
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000231037	retained_intron		15	-1	76599185	896
ENSMUSG00000018143	protein_coding	Mafk	ENSMUST00000110836	protein_coding	principal1	5	1	139797514	3097
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000128580	nonsense_mediated_decay		16	-1	18324450	1495
ENSMUSG00000024471	protein_coding	Myot	ENSMUST00000025349	protein_coding	principal1	18	1	44334074	2209
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000229504	retained_intron		15	-1	76600086	606
ENSMUSG00000044709	protein_coding	Gemin7	ENSMUST00000117222	protein_coding	principal1	7	-1	19573823	1023
ENSMUSG00000045180	protein_coding	Shroom2	ENSMUST00000062317	protein_coding	alternative2	X	-1	152769465	6997
ENSMUSG00000020690	protein_coding	Efcab3	ENSMUST00000021029	protein_coding	principal1	11	1	105092206	1757
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000174555	processed_transcript		9	1	50845301	529
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000229437	retained_intron		15	-1	76600782	791
ENSMUSG00000098140	protein_coding	Gm26938	ENSMUST00000182839	protein_coding	principal1	5	-1	139826407	744
ENSMUSG00000058354	protein_coding	Krt6a	ENSMUST00000023788	protein_coding	principal1	15	-1	101694307	2278
ENSMUSG00000024471	protein_coding	Myot	ENSMUST00000115498	protein_coding	principal1	18	1	44334074	2087
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000231191	processed_transcript		15	-1	76601984	646
ENSMUSG00000044709	protein_coding	Gemin7	ENSMUST00000122127	protein_coding	principal1	7	-1	19572968	652
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000230557	retained_intron		15	-1	76601526	198
ENSMUSG00000020690	protein_coding	Efcab3	ENSMUST00000154543	processed_transcript		11	1	105112656	685
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000229015	retained_intron		15	-1	76602695	616
ENSMUSG00000044709	protein_coding	Gemin7	ENSMUST00000122055	protein_coding	principal1	7	-1	19573089	609
ENSMUSG00000045180	protein_coding	Shroom2	ENSMUST00000152746	processed_transcript		X	-1	152673240	4251
ENSMUSG00000045180	protein_coding	Shroom2	ENSMUST00000124141	processed_transcript		X	-1	152643924	837
ENSMUSG00000000157	protein_coding	Itgb2l	ENSMUST00000000161	protein_coding	principal2	16	-1	96443619	2633
ENSMUSG00000054822	lincRNA	1700041G16Rik	ENSMUST00000186344	lincRNA		8	1	22805766	1824
ENSMUSG00000044709	protein_coding	Gemin7	ENSMUST00000119912	protein_coding	principal1	7	-1	19573385	653
ENSMUSG00000054822	lincRNA	1700041G16Rik	ENSMUST00000068068	lincRNA		8	1	22808275	458
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000229797	processed_transcript		15	-1	76603577	710
ENSMUSG00000058354	protein_coding	Krt6a	ENSMUST00000230205	retained_intron		15	-1	101694279	2372
ENSMUSG00000043088	protein_coding	Il17re	ENSMUST00000203281	nonsense_mediated_decay		6	1	113458895	1973
ENSMUSG00000044709	protein_coding	Gemin7	ENSMUST00000208826	protein_coding		7	-1	19577595	613
ENSMUSG00000034022	protein_coding	Cpsf1	ENSMUST00000229447	retained_intron		15	-1	76603600	609
ENSMUSG00000116145	TEC	5730521K06Rik	ENSMUST00000230081	TEC		15	1	76590120	1608
ENSMUSG00000000157	protein_coding	Itgb2l	ENSMUST00000131567	nonsense_mediated_decay		16	-1	96443614	2581
ENSMUSG00000044709	protein_coding	Gemin7	ENSMUST00000151646	protein_coding		7	-1	19573174	542
ENSMUSG00000045180	protein_coding	Shroom2	ENSMUST00000141677	processed_transcript		X	-1	152644110	832
ENSMUSG00000029551	protein_coding	Psmg3	ENSMUST00000031531	protein_coding	principal1	5	-1	139826885	883
ENSMUSG00000000157	protein_coding	Itgb2l	ENSMUST00000113773	protein_coding	alternative2	16	-1	96443612	2806
ENSMUSG00000078650	protein_coding	G6pc	ENSMUST00000019469	protein_coding	principal1	11	1	101367561	2414
ENSMUSG00000000157	protein_coding	Itgb2l	ENSMUST00000131777	retained_intron		16	-1	96429144	608
ENSMUSG00000029551	protein_coding	Psmg3	ENSMUST00000182602	protein_coding	principal1	5	-1	139826843	733
ENSMUSG00000000157	protein_coding	Itgb2l	ENSMUST00000233827	retained_intron		16	-1	96432872	1484
ENSMUSG00000032334	protein_coding	Loxl1	ENSMUST00000061799	protein_coding	principal1	9	-1	58313186	3297
ENSMUSG00000044709	protein_coding	Gemin7	ENSMUST00000051364	protein_coding	principal1	7	-1	19573343	763
ENSMUSG00000028545	protein_coding	Bend5	ENSMUST00000030274	protein_coding	principal1	4	1	111415006	1826
ENSMUSG00000029551	protein_coding	Psmg3	ENSMUST00000182743	retained_intron		5	-1	139826875	2401
ENSMUSG00000090882	processed_pseudogene	Gm17065	ENSMUST00000165245	processed_pseudogene		16	1	61058761	239
ENSMUSG00000091459	processed_pseudogene	Gm17054	ENSMUST00000169811	processed_pseudogene		16	1	61105150	259
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176652	protein_coding	principal1	17	-1	24527938	3003
ENSMUSG00000096935	antisense	1700113A16Rik	ENSMUST00000197172	antisense		3	-1	88177692	776
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000115628	protein_coding	principal1	16	-1	18344042	1622
ENSMUSG00000116956	processed_pseudogene	Gm49610	ENSMUST00000232291	processed_pseudogene		16	1	61358837	416
ENSMUSG00000045180	protein_coding	Shroom2	ENSMUST00000101141	protein_coding	principal3	X	-1	152769461	7494
ENSMUSG00000092029	processed_pseudogene	Gm9027	ENSMUST00000165914	processed_pseudogene		16	1	61377256	661
ENSMUSG00000096935	antisense	1700113A16Rik	ENSMUST00000181837	antisense		3	-1	88177785	987
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000145758	retained_intron		16	-1	18304145	898
ENSMUSG00000090303	unprocessed_pseudogene	Vmn2r-ps3	ENSMUST00000176077	unprocessed_pseudogene		3	-1	64055610	1101
ENSMUSG00000043088	protein_coding	Il17re	ENSMUST00000053569	protein_coding		6	1	113458895	1898
ENSMUSG00000096935	antisense	1700113A16Rik	ENSMUST00000200006	antisense		3	-1	88177706	563
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000231605	protein_coding		16	-1	18343906	744
ENSMUSG00000090448	processed_pseudogene	Gm17192	ENSMUST00000169031	processed_pseudogene		16	1	61460962	511
ENSMUSG00000092131	antisense	BC050972	ENSMUST00000168475	antisense		9	-1	66802859	526
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000231308	processed_transcript		16	-1	18306121	483
ENSMUSG00000028545	protein_coding	Bend5	ENSMUST00000129760	processed_transcript		4	1	111415088	1448
ENSMUSG00000092131	antisense	BC050972	ENSMUST00000169420	antisense		9	-1	66802559	342
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000231543	protein_coding		16	-1	18324423	496
ENSMUSG00000070461	sense_overlapping	9230112E08Rik	ENSMUST00000189441	sense_overlapping		2	1	180983924	3352
ENSMUSG00000090223	protein_coding	Pcp4	ENSMUST00000061739	protein_coding	principal1	16	1	96467606	641
ENSMUSG00000043088	protein_coding	Il17re	ENSMUST00000203897	retained_intron		6	1	113464806	2852
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000232588	protein_coding		16	-1	18331471	724
ENSMUSG00000116619	lincRNA	Gm49615	ENSMUST00000232249	lincRNA		16	1	62097461	763
ENSMUSG00000070461	sense_overlapping	9230112E08Rik	ENSMUST00000094214	sense_overlapping		2	1	180984232	1360
ENSMUSG00000028545	protein_coding	Bend5	ENSMUST00000139876	protein_coding		4	1	111433197	904
ENSMUSG00000024174	protein_coding	Pot1b	ENSMUST00000233802	nonsense_mediated_decay		17	-1	55712578	3582
ENSMUSG00000090223	protein_coding	Pcp4	ENSMUST00000232906	nonsense_mediated_decay		16	1	96493816	637
ENSMUSG00000043088	protein_coding	Il17re	ENSMUST00000205211	retained_intron		6	1	113466360	771
ENSMUSG00000028545	protein_coding	Bend5	ENSMUST00000130523	processed_transcript		4	1	111415047	514
ENSMUSG00000090223	protein_coding	Pcp4	ENSMUST00000233816	protein_coding		16	1	96493816	626
ENSMUSG00000011267	protein_coding	Zfp296	ENSMUST00000108453	protein_coding	principal1	7	1	19577287	1530
ENSMUSG00000092131	antisense	BC050972	ENSMUST00000169153	antisense		9	-1	66804359	467
ENSMUSG00000090223	protein_coding	Pcp4	ENSMUST00000233216	processed_transcript		16	1	96499620	603
ENSMUSG00000028545	protein_coding	Bend5	ENSMUST00000123667	processed_transcript		4	1	111433319	627
ENSMUSG00000074232	TEC	Gm10647	ENSMUST00000238461	TEC		9	1	66797039	2034
ENSMUSG00000011267	protein_coding	Zfp296	ENSMUST00000208314	retained_intron		7	1	19577829	639
ENSMUSG00000028545	protein_coding	Bend5	ENSMUST00000138394	processed_transcript		4	1	111415207	391
ENSMUSG00000043088	protein_coding	Il17re	ENSMUST00000101065	protein_coding		6	1	113458895	1973
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000177024	retained_intron		17	-1	24512488	3194
ENSMUSG00000074232	TEC	Gm10647	ENSMUST00000098612	TEC		9	1	66797039	2036
ENSMUSG00000117081	protein_coding	Gm49948	ENSMUST00000113795	protein_coding	principal1	16	1	96361794	1031
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000148352	nonsense_mediated_decay		2	-1	92371018	2621
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000231372	protein_coding		16	-1	18343897	714
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000142677	retained_intron		16	-1	18311453	639
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000176289	nonsense_mediated_decay		2	-1	92371011	2310
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000152684	retained_intron		16	-1	18313034	600
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000176810	protein_coding	alternative2	2	-1	92371028	2477
ENSMUSG00000061527	protein_coding	Krt5	ENSMUST00000023709	protein_coding	principal1	15	-1	101712898	2197
ENSMUSG00000027824	protein_coding	Vmn2r1	ENSMUST00000029406	protein_coding	principal1	3	1	64081547	6860
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000111284	protein_coding	alternative2	2	-1	92371967	2449
ENSMUSG00000024174	protein_coding	Pot1b	ENSMUST00000086876	protein_coding	principal2	17	-1	55712578	3523
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000232073	processed_transcript		16	-1	18324451	377
ENSMUSG00000043061	protein_coding	Tmem18	ENSMUST00000057151	protein_coding	principal1	12	1	30584426	2971
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000090582	protein_coding		2	-1	92371033	2291
ENSMUSG00000024174	protein_coding	Pot1b	ENSMUST00000233972	protein_coding	alternative2	17	-1	55712624	2185
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000125287	protein_coding		16	-1	18348103	632
ENSMUSG00000024174	protein_coding	Pot1b	ENSMUST00000233557	protein_coding		17	-1	55712607	663
ENSMUSG00000061298	protein_coding	Agbl4	ENSMUST00000106587	protein_coding		4	1	110397698	2631
ENSMUSG00000028803	protein_coding	Nipal3	ENSMUST00000183807	nonsense_mediated_decay		4	-1	135494506	1956
ENSMUSG00000043061	protein_coding	Tmem18	ENSMUST00000218826	retained_intron		12	1	30586914	762
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000130752	protein_coding		16	-1	18343902	496
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000177273	retained_intron		2	-1	92366521	634
ENSMUSG00000028803	protein_coding	Nipal3	ENSMUST00000105856	protein_coding	alternative2	4	-1	135494506	2624
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000145203	retained_intron		16	-1	18324451	518
ENSMUSG00000024174	protein_coding	Pot1b	ENSMUST00000233301	retained_intron		17	-1	55712628	1813
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000175851	retained_intron		2	-1	92366776	553
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000231255	processed_transcript		16	-1	18343932	387
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000176646	retained_intron		2	-1	92369474	761
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000150152	retained_intron		16	-1	18324451	520
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000176820	processed_transcript		2	-1	92369661	514
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000176402	retained_intron		2	-1	92370073	768
ENSMUSG00000025333	protein_coding	Gpr143	ENSMUST00000026383	protein_coding	principal1	X	1	152781986	1586
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000134385	retained_intron		16	-1	18348083	3813
ENSMUSG00000050788	protein_coding	Olfr419	ENSMUST00000214725	protein_coding	principal1	1	-1	174252061	2685
ENSMUSG00000090628	processed_pseudogene	Gm17083	ENSMUST00000165849	processed_pseudogene		13	-1	34008331	1366
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000232192	retained_intron		16	-1	18343914	2519
ENSMUSG00000013539	protein_coding	Tango2	ENSMUST00000232558	retained_intron		16	-1	18339078	600
ENSMUSG00000113351	processed_pseudogene	Gm48575	ENSMUST00000221591	processed_pseudogene		13	-1	96678123	655
ENSMUSG00000050788	protein_coding	Olfr419	ENSMUST00000061990	protein_coding	principal1	1	-1	174250976	1088
ENSMUSG00000085457	antisense	1110046J04Rik	ENSMUST00000180906	antisense		13	1	33935567	2776
ENSMUSG00000019969	protein_coding	Psen1	ENSMUST00000041806	protein_coding	principal1	12	1	83688152	2690
ENSMUSG00000085457	antisense	1110046J04Rik	ENSMUST00000147622	antisense		13	1	33935820	397
ENSMUSG00000025333	protein_coding	Gpr143	ENSMUST00000139310	retained_intron		X	1	152782018	917
ENSMUSG00000028803	protein_coding	Nipal3	ENSMUST00000102549	protein_coding	principal3	4	-1	135494623	5153
ENSMUSG00000025333	protein_coding	Gpr143	ENSMUST00000151819	processed_transcript		X	1	152781921	745
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000146311	retained_intron		2	-1	92371033	2497
ENSMUSG00000111378	lincRNA	Gm47230	ENSMUST00000214422	lincRNA		9	1	44579608	3254
ENSMUSG00000111378	lincRNA	Gm47230	ENSMUST00000215946	lincRNA		9	1	44579627	3188
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000175740	retained_intron		2	-1	92371018	655
ENSMUSG00000059237	processed_pseudogene	Ppp1r2-ps4	ENSMUST00000112182	processed_pseudogene		9	-1	66805938	633
ENSMUSG00000085457	antisense	1110046J04Rik	ENSMUST00000181800	antisense		13	1	33936032	777
ENSMUSG00000051879	protein_coding	Krt71	ENSMUST00000023710	protein_coding	principal1	15	-1	101743109	2186
ENSMUSG00000038240	protein_coding	Pdss2	ENSMUST00000160823	nonsense_mediated_decay		10	1	43221486	4075
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000176339	protein_coding		2	-1	92374869	563
ENSMUSG00000028803	protein_coding	Nipal3	ENSMUST00000140982	protein_coding		4	-1	135474454	1331
ENSMUSG00000091462	processed_pseudogene	Gm17084	ENSMUST00000163843	processed_pseudogene		13	1	34034526	511
ENSMUSG00000019969	protein_coding	Psen1	ENSMUST00000221993	retained_intron		12	1	83688172	1978
ENSMUSG00000028803	protein_coding	Nipal3	ENSMUST00000183397	processed_transcript		4	-1	135455063	669
ENSMUSG00000095597	transcribed_processed_pseudogene	Rps7-ps3	ENSMUST00000178147	processed_transcript		X	-1	152910155	651
ENSMUSG00000018433	protein_coding	Nol11	ENSMUST00000106757	protein_coding	alternative2	11	-1	107189381	3098
ENSMUSG00000019969	protein_coding	Psen1	ENSMUST00000223542	processed_transcript		12	1	83688188	521
ENSMUSG00000040434	protein_coding	Large2	ENSMUST00000124428	retained_intron		2	-1	92371945	615
ENSMUSG00000028803	protein_coding	Nipal3	ENSMUST00000148023	processed_transcript		4	-1	135455335	769
ENSMUSG00000019969	protein_coding	Psen1	ENSMUST00000221072	retained_intron		12	1	83724639	689
ENSMUSG00000018433	protein_coding	Nol11	ENSMUST00000122966	processed_transcript		11	-1	107168433	434
ENSMUSG00000095597	transcribed_processed_pseudogene	Rps7-ps3	ENSMUST00000187973	transcribed_processed_pseudogene		X	-1	152910120	582
ENSMUSG00000025059	protein_coding	Gk	ENSMUST00000026039	protein_coding		X	-1	85776819	4340
ENSMUSG00000028803	protein_coding	Nipal3	ENSMUST00000145020	protein_coding		4	-1	135494969	814
ENSMUSG00000018433	protein_coding	Nol11	ENSMUST00000136917	processed_transcript		11	-1	107184821	2704
ENSMUSG00000019969	protein_coding	Psen1	ENSMUST00000101225	protein_coding	principal1	12	1	83688563	3023
ENSMUSG00000028803	protein_coding	Nipal3	ENSMUST00000146617	protein_coding		4	-1	135495038	462
ENSMUSG00000083440	processed_pseudogene	Rpl7a-ps12	ENSMUST00000120384	processed_pseudogene		X	-1	152910296	794
ENSMUSG00000018433	protein_coding	Nol11	ENSMUST00000139168	processed_transcript		11	-1	107189352	619
ENSMUSG00000018433	protein_coding	Nol11	ENSMUST00000018577	protein_coding	principal3	11	-1	107189381	3158
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176353	protein_coding		17	-1	24527846	2503
ENSMUSG00000025059	protein_coding	Gk	ENSMUST00000113978	protein_coding	alternative1	X	-1	85776653	4279
ENSMUSG00000038240	protein_coding	Pdss2	ENSMUST00000095725	protein_coding	principal1	10	1	43221486	2127
ENSMUSG00000031722	protein_coding	Hp	ENSMUST00000074898	protein_coding	principal1	8	-1	109579172	1345
ENSMUSG00000067215	protein_coding	Usp51	ENSMUST00000095755	protein_coding	principal1	X	1	153006469	2204
ENSMUSG00000025059	protein_coding	Gk	ENSMUST00000156390	protein_coding	principal3	X	-1	85776637	4245
ENSMUSG00000038240	protein_coding	Pdss2	ENSMUST00000160108	retained_intron		10	1	43221517	1671
ENSMUSG00000028801	protein_coding	Stpg1	ENSMUST00000153891	processed_transcript		4	1	135494790	556
ENSMUSG00000095789	protein_coding	Nupr1l	ENSMUST00000195766	nonsense_mediated_decay		5	1	129908540	628
ENSMUSG00000038240	protein_coding	Pdss2	ENSMUST00000159139	protein_coding		10	1	43221600	1467
ENSMUSG00000025059	protein_coding	Gk	ENSMUST00000142152	protein_coding		X	-1	85776624	4229
ENSMUSG00000047238	protein_coding	Mageh1	ENSMUST00000051484	protein_coding	principal1	X	-1	153037575	1410
ENSMUSG00000031722	protein_coding	Hp	ENSMUST00000212918	processed_transcript		8	-1	109579010	801
ENSMUSG00000095789	protein_coding	Nupr1l	ENSMUST00000194521	nonsense_mediated_decay		5	1	129908542	831
ENSMUSG00000028801	protein_coding	Stpg1	ENSMUST00000123221	processed_transcript		4	1	135495977	1507
ENSMUSG00000038240	protein_coding	Pdss2	ENSMUST00000162758	retained_intron		10	1	43221736	1002
ENSMUSG00000025059	protein_coding	Gk	ENSMUST00000125081	retained_intron		X	-1	85761982	2811
ENSMUSG00000031722	protein_coding	Hp	ENSMUST00000212018	processed_transcript		8	-1	109578657	749
ENSMUSG00000038240	protein_coding	Pdss2	ENSMUST00000162008	protein_coding		10	1	43393921	706
ENSMUSG00000095789	protein_coding	Nupr1l	ENSMUST00000178355	protein_coding	principal1	5	1	129908568	1827
ENSMUSG00000025059	protein_coding	Gk	ENSMUST00000124386	retained_intron		X	-1	85737610	778
ENSMUSG00000025059	protein_coding	Gk	ENSMUST00000122950	retained_intron		X	-1	85714458	527
ENSMUSG00000091745	antisense	Gm17098	ENSMUST00000166507	antisense		9	1	66834699	628
ENSMUSG00000095789	protein_coding	Nupr1l	ENSMUST00000192787	processed_transcript		5	1	129910970	312
ENSMUSG00000025059	protein_coding	Gk	ENSMUST00000152221	processed_transcript		X	-1	85712475	405
ENSMUSG00000087232	antisense	Gm14764	ENSMUST00000147130	antisense		X	1	85744348	313
ENSMUSG00000020682	protein_coding	Mmp28	ENSMUST00000103209	protein_coding		11	-1	83463022	3438
ENSMUSG00000111783	processed_pseudogene	Gm8863	ENSMUST00000216630	processed_pseudogene		9	-1	46714158	926
ENSMUSG00000111236	lincRNA	Gm31614	ENSMUST00000215504	lincRNA		9	1	46830339	3231
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000232060	lincRNA		16	-1	93365329	1116
ENSMUSG00000104419	TEC	2900092O11Rik	ENSMUST00000191770	TEC		1	1	184442980	755
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000188056	lincRNA		16	-1	93358712	1592
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000231377	lincRNA		16	-1	93358662	781
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000232140	lincRNA		16	-1	93354102	912
ENSMUSG00000061298	protein_coding	Agbl4	ENSMUST00000106591	protein_coding		4	1	110397698	1406
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000185971	lincRNA		16	-1	93353189	1309
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000232511	lincRNA		16	-1	93365390	1149
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000185364	lincRNA		16	-1	93354061	590
ENSMUSG00000101574	lincRNA	1700112H15Rik	ENSMUST00000188766	lincRNA		1	-1	184557691	778
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000186848	protein_coding		12	1	82616636	1472
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000232221	lincRNA		16	-1	93359543	522
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000231869	lincRNA		16	-1	93365389	717
ENSMUSG00000020682	protein_coding	Mmp28	ENSMUST00000021020	protein_coding		11	-1	83462961	2311
ENSMUSG00000028801	protein_coding	Stpg1	ENSMUST00000063707	protein_coding	principal1	4	1	135495987	2380
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000162503	protein_coding	principal1	15	1	76576358	2040
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000161801	protein_coding		12	1	82616925	2141
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000185242	lincRNA		16	-1	93354071	634
ENSMUSG00000103955	TEC	Gm37270	ENSMUST00000194277	TEC		4	1	135450881	330
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000185555	retained_intron		16	-1	93359543	1286
ENSMUSG00000053581	protein_coding	Zfand2a	ENSMUST00000079996	protein_coding	principal1	5	-1	139484549	3169
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000189798	retained_intron		16	-1	93359511	471
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000232456	lincRNA		16	-1	93366668	652
ENSMUSG00000100277	processed_transcript	1810053B23Rik	ENSMUST00000231338	retained_intron		16	-1	93365377	1797
ENSMUSG00000020682	protein_coding	Mmp28	ENSMUST00000108137	protein_coding	principal1	11	-1	83463071	2451
ENSMUSG00000075107	protein_coding	Olfr1216	ENSMUST00000218738	processed_transcript		2	-1	89018340	694
ENSMUSG00000099696	lincRNA	2900052N01Rik	ENSMUST00000191603	lincRNA		9	1	46913493	2695
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000023361	protein_coding	alternative2	16	-1	13903127	4228
ENSMUSG00000075107	protein_coding	Olfr1216	ENSMUST00000216000	protein_coding	principal1	2	-1	89018324	3595
ENSMUSG00000090214	antisense	Gm15657	ENSMUST00000148293	antisense		16	-1	33787112	574
ENSMUSG00000020682	protein_coding	Mmp28	ENSMUST00000119346	protein_coding		11	-1	83462992	1517
ENSMUSG00000075107	protein_coding	Olfr1216	ENSMUST00000217000	protein_coding	principal1	2	-1	89018340	3667
ENSMUSG00000099696	lincRNA	2900052N01Rik	ENSMUST00000185568	lincRNA		9	1	46913603	2380
ENSMUSG00000020682	protein_coding	Mmp28	ENSMUST00000138780	processed_transcript		11	-1	83463071	692
ENSMUSG00000053040	protein_coding	Aph1c	ENSMUST00000169282	protein_coding	principal1	9	-1	66834726	5205
ENSMUSG00000053581	protein_coding	Zfand2a	ENSMUST00000110851	protein_coding	principal1	5	-1	139484517	3121
ENSMUSG00000075107	protein_coding	Olfr1216	ENSMUST00000099800	protein_coding	principal1	2	-1	89014062	936
ENSMUSG00000090214	antisense	Gm15657	ENSMUST00000162677	antisense		16	-1	33796098	322
ENSMUSG00000099696	lincRNA	2900052N01Rik	ENSMUST00000189828	lincRNA		9	1	46913627	2157
ENSMUSG00000090214	antisense	Gm15657	ENSMUST00000163077	antisense		16	-1	33796096	779
ENSMUSG00000074646	protein_coding	6430550D23Rik	ENSMUST00000124812	nonsense_mediated_decay		2	-1	156007907	2429
ENSMUSG00000053581	protein_coding	Zfand2a	ENSMUST00000132454	processed_transcript		5	-1	139478943	376
ENSMUSG00000053040	protein_coding	Aph1c	ENSMUST00000057261	protein_coding		9	-1	66834648	715
ENSMUSG00000090214	antisense	Gm15657	ENSMUST00000159501	antisense		16	-1	33796874	356
ENSMUSG00000053581	protein_coding	Zfand2a	ENSMUST00000150992	protein_coding		5	-1	139484464	463
ENSMUSG00000103308	lincRNA	Gm37800	ENSMUST00000193667	lincRNA		1	-1	184629473	553
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000185665	protein_coding	principal4	12	1	82616945	2201
ENSMUSG00000039089	protein_coding	L3mbtl3	ENSMUST00000105519	protein_coding	alternative2	10	-1	26373956	4500
ENSMUSG00000103308	lincRNA	Gm37800	ENSMUST00000192129	lincRNA		1	-1	184617971	664
ENSMUSG00000085982	processed_transcript	9530051G07Rik	ENSMUST00000127673	processed_transcript		X	1	153037629	4414
ENSMUSG00000102606	processed_pseudogene	Rpl21-ps1	ENSMUST00000193804	processed_pseudogene		1	1	184617248	480
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000200911	protein_coding	alternative1	12	1	82617038	2626
ENSMUSG00000035085	protein_coding	1700020L24Rik	ENSMUST00000037378	protein_coding	principal1	11	1	83437677	949
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000173107	protein_coding	principal3	5	1	47983138	9960
ENSMUSG00000001419	protein_coding	Mef2d	ENSMUST00000001455	protein_coding		3	1	88142372	5401
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000202210	protein_coding	alternative1	12	1	82617499	3069
ENSMUSG00000035085	protein_coding	1700020L24Rik	ENSMUST00000188702	protein_coding		11	1	83440131	564
ENSMUSG00000053581	protein_coding	Zfand2a	ENSMUST00000143889	processed_transcript		5	-1	139484428	433
ENSMUSG00000039089	protein_coding	L3mbtl3	ENSMUST00000218585	processed_transcript		10	-1	26314130	2989
ENSMUSG00000074646	protein_coding	6430550D23Rik	ENSMUST00000086145	protein_coding	alternative2	2	-1	156007919	1520
ENSMUSG00000084275	processed_pseudogene	Gm5396	ENSMUST00000121222	processed_pseudogene		X	-1	153113454	532
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000150435	processed_transcript		16	-1	13840327	511
ENSMUSG00000118558	processed_pseudogene	CT010569.1	ENSMUST00000239089	processed_pseudogene		16	-1	62483949	142
ENSMUSG00000039089	protein_coding	L3mbtl3	ENSMUST00000174766	protein_coding	principal3	10	-1	26375185	3411
ENSMUSG00000001419	protein_coding	Mef2d	ENSMUST00000119251	protein_coding		3	1	88142416	3488
ENSMUSG00000000159	protein_coding	Igsf5	ENSMUST00000113794	protein_coding	alternative2	16	1	96361668	1601
ENSMUSG00000029821	protein_coding	Gsdme	ENSMUST00000204417	retained_intron		6	-1	50193515	4628
ENSMUSG00000039089	protein_coding	L3mbtl3	ENSMUST00000218665	processed_transcript		10	-1	26314614	386
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000186458	protein_coding	alternative1	12	1	82617499	5588
ENSMUSG00000074646	protein_coding	6430550D23Rik	ENSMUST00000138025	retained_intron		2	-1	156007923	2306
ENSMUSG00000039089	protein_coding	L3mbtl3	ENSMUST00000218909	retained_intron		10	-1	26316274	2823
ENSMUSG00000061298	protein_coding	Agbl4	ENSMUST00000106592	protein_coding	principal1	4	1	110397698	2959
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000174061	retained_intron		5	1	47983154	3350
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000186081	nonsense_mediated_decay		12	1	82617572	2091
ENSMUSG00000061298	protein_coding	Agbl4	ENSMUST00000148038	protein_coding		4	1	111118911	4012
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000201271	protein_coding		12	1	82617587	663
ENSMUSG00000061298	protein_coding	Agbl4	ENSMUST00000106589	protein_coding		4	1	110397661	400
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000127432	processed_transcript		16	-1	13845430	738
ENSMUSG00000087288	processed_transcript	Gm13061	ENSMUST00000137962	processed_transcript		4	1	134018147	664
ENSMUSG00000074646	protein_coding	6430550D23Rik	ENSMUST00000144686	protein_coding		2	-1	156007919	471
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000200861	protein_coding		12	1	82617635	525
ENSMUSG00000039089	protein_coding	L3mbtl3	ENSMUST00000217699	retained_intron		10	-1	26375971	3315
ENSMUSG00000043897	protein_coding	Vmn2r2	ENSMUST00000177151	protein_coding	alternative2	3	-1	64141928	5266
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000186309	protein_coding	principal4	12	1	82617654	1693
ENSMUSG00000001419	protein_coding	Mef2d	ENSMUST00000107558	protein_coding	principal1	3	1	88142572	1767
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000201861	protein_coding		12	1	82617849	535
ENSMUSG00000039089	protein_coding	L3mbtl3	ENSMUST00000040219	protein_coding	principal3	10	-1	26373956	4572
ENSMUSG00000043897	protein_coding	Vmn2r2	ENSMUST00000077958	protein_coding	principal2	3	-1	64137480	2484
ENSMUSG00000074646	protein_coding	6430550D23Rik	ENSMUST00000140657	protein_coding		2	-1	156007977	573
ENSMUSG00000061298	protein_coding	Agbl4	ENSMUST00000136433	processed_transcript		4	1	111118841	574
ENSMUSG00000000159	protein_coding	Igsf5	ENSMUST00000000163	protein_coding	alternative2	16	1	96361794	1851
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000115804	protein_coding	principal3	16	-1	13903021	2880
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000172998	retained_intron		5	1	47983154	3265
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000193448	retained_intron		12	1	82618025	968
ENSMUSG00000074646	protein_coding	6430550D23Rik	ENSMUST00000139116	protein_coding		2	-1	156004427	549
ENSMUSG00000074646	protein_coding	6430550D23Rik	ENSMUST00000156993	protein_coding		2	-1	156004147	294
ENSMUSG00000001419	protein_coding	Mef2d	ENSMUST00000107559	protein_coding		3	1	88142572	1791
ENSMUSG00000074646	protein_coding	6430550D23Rik	ENSMUST00000141437	protein_coding		2	-1	156004147	423
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000191311	protein_coding		12	1	82651829	1486
ENSMUSG00000061298	protein_coding	Agbl4	ENSMUST00000154123	processed_transcript		4	1	111566695	595
ENSMUSG00000000159	protein_coding	Igsf5	ENSMUST00000081093	protein_coding	principal3	16	1	96361794	1554
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000152450	processed_transcript		16	-1	13837081	782
ENSMUSG00000074646	protein_coding	6430550D23Rik	ENSMUST00000109617	protein_coding	principal4	2	-1	156004427	1872
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000191352	protein_coding		12	1	82651829	1507
ENSMUSG00000001419	protein_coding	Mef2d	ENSMUST00000140927	retained_intron		3	1	88142574	427
ENSMUSG00000061298	protein_coding	Agbl4	ENSMUST00000142460	processed_transcript		4	1	111566725	834
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000191107	protein_coding		12	1	82651829	1621
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000186323	protein_coding		12	1	82651829	1308
ENSMUSG00000050966	protein_coding	Lin28a	ENSMUST00000051674	protein_coding	principal1	4	-1	134018841	3505
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000185674	protein_coding		12	1	82651829	1362
ENSMUSG00000001419	protein_coding	Mef2d	ENSMUST00000139153	processed_transcript		3	1	88162960	502
ENSMUSG00000061298	protein_coding	Agbl4	ENSMUST00000097920	protein_coding		4	1	110397791	1798
ENSMUSG00000001419	protein_coding	Mef2d	ENSMUST00000152861	processed_transcript		3	1	88168252	482
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000190964	retained_intron		12	1	83046990	1131
ENSMUSG00000000159	protein_coding	Igsf5	ENSMUST00000139595	processed_transcript		16	1	96386331	380
ENSMUSG00000061298	protein_coding	Agbl4	ENSMUST00000080744	protein_coding		4	1	110397791	1864
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000201767	protein_coding		12	1	83106787	782
ENSMUSG00000050966	protein_coding	Lin28a	ENSMUST00000176113	protein_coding		4	-1	134012386	394
ENSMUSG00000000159	protein_coding	Igsf5	ENSMUST00000136292	protein_coding		16	1	96396406	397
ENSMUSG00000097412	transcribed_unprocessed_pseudogene	1810014B01Rik	ENSMUST00000218095	processed_transcript		10	1	86685525	1622
ENSMUSG00000040462	protein_coding	Os9	ENSMUST00000080975	protein_coding	principal3	10	-1	127121125	2458
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000201512	retained_intron		12	1	83116225	403
ENSMUSG00000021219	protein_coding	Rgs6	ENSMUST00000101234	protein_coding		12	1	82651829	1368
ENSMUSG00000050966	protein_coding	Lin28a	ENSMUST00000176292	protein_coding		4	-1	134009411	484
ENSMUSG00000117039	TEC	Gm32358	ENSMUST00000233005	TEC		16	1	96444714	2390
ENSMUSG00000083904	processed_pseudogene	Gm12805	ENSMUST00000117305	processed_pseudogene		4	-1	111320605	1048
ENSMUSG00000050966	protein_coding	Lin28a	ENSMUST00000176897	protein_coding		4	-1	134018382	478
ENSMUSG00000082671	processed_pseudogene	Gm14006	ENSMUST00000122132	processed_pseudogene		2	-1	128558234	981
ENSMUSG00000097412	transcribed_unprocessed_pseudogene	1810014B01Rik	ENSMUST00000218691	processed_transcript		10	1	86685525	323
ENSMUSG00000082348	processed_pseudogene	Gm12807	ENSMUST00000121546	processed_pseudogene		4	-1	110513732	962
ENSMUSG00000117231	processed_transcript	Gm41609	ENSMUST00000233559	antisense		17	-1	70805997	2325
ENSMUSG00000082350	processed_pseudogene	Gm14008	ENSMUST00000120483	processed_pseudogene		2	-1	128588168	274
ENSMUSG00000097412	transcribed_unprocessed_pseudogene	1810014B01Rik	ENSMUST00000181587	processed_transcript		10	1	86685601	1661
ENSMUSG00000117231	processed_transcript	Gm41609	ENSMUST00000233879	retained_intron		17	-1	70806059	3157
ENSMUSG00000097412	transcribed_unprocessed_pseudogene	1810014B01Rik	ENSMUST00000220419	processed_transcript		10	1	86685611	1665
ENSMUSG00000081376	processed_pseudogene	Gm11694	ENSMUST00000118637	processed_pseudogene		11	1	115493024	159
ENSMUSG00000097412	transcribed_unprocessed_pseudogene	1810014B01Rik	ENSMUST00000218106	processed_transcript		10	1	86685781	1483
ENSMUSG00000040462	protein_coding	Os9	ENSMUST00000164259	protein_coding	alternative2	10	-1	127121131	2627
ENSMUSG00000097412	transcribed_unprocessed_pseudogene	1810014B01Rik	ENSMUST00000218536	transcribed_unprocessed_pseudogene		10	1	86685889	204
ENSMUSG00000075222	protein_coding	Olfr988	ENSMUST00000111597	protein_coding	principal1	2	-1	85363058	1702
ENSMUSG00000075222	protein_coding	Olfr988	ENSMUST00000215511	protein_coding	principal1	2	-1	85363227	1906
ENSMUSG00000084899	processed_transcript	Gm15344	ENSMUST00000152600	processed_transcript		10	-1	86693095	421
ENSMUSG00000075222	protein_coding	Olfr988	ENSMUST00000099928	protein_coding	principal1	2	-1	85354000	1076
ENSMUSG00000040462	protein_coding	Os9	ENSMUST00000218798	nonsense_mediated_decay		10	-1	127121115	723
ENSMUSG00000022824	protein_coding	Muc13	ENSMUST00000115044	protein_coding	principal1	16	1	33794037	2969
ENSMUSG00000082280	processed_pseudogene	Gm5847	ENSMUST00000178959	processed_pseudogene		3	1	65613589	1595
ENSMUSG00000030046	protein_coding	Bmp10	ENSMUST00000032125	protein_coding	principal1	6	1	87428994	4490
ENSMUSG00000084028	processed_pseudogene	Gm13983	ENSMUST00000118018	processed_pseudogene		2	-1	118484177	865
ENSMUSG00000022824	protein_coding	Muc13	ENSMUST00000023520	protein_coding	principal1	16	1	33794367	2942
ENSMUSG00000074812	protein_coding	Spdye4c	ENSMUST00000155430	protein_coding	alternative2	2	1	128591209	709
ENSMUSG00000020048	protein_coding	Hsp90b1	ENSMUST00000129178	retained_intron		10	-1	86701968	3222
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000033967	nonsense_mediated_decay		5	1	47983154	6564
ENSMUSG00000046500	protein_coding	Tafa4	ENSMUST00000089295	protein_coding	principal1	6	-1	97060413	2190
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000223859	protein_coding		17	-1	56476439	5588
ENSMUSG00000046500	protein_coding	Tafa4	ENSMUST00000203930	retained_intron		6	-1	97060393	3766
ENSMUSG00000074812	protein_coding	Spdye4c	ENSMUST00000144559	nonsense_mediated_decay	principal5	2	1	128591272	1246
ENSMUSG00000074812	protein_coding	Spdye4c	ENSMUST00000178601	protein_coding	alternative2	2	1	128594187	519
ENSMUSG00000115284	antisense	Gm34678	ENSMUST00000226863	antisense		15	-1	51884283	1222
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000154150	retained_intron		16	-1	13902982	3178
ENSMUSG00000115284	antisense	Gm34678	ENSMUST00000227812	antisense		15	-1	51897041	1861
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000086828	protein_coding		17	-1	56462216	5608
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000174313	protein_coding	alternative1	5	1	47983154	7734
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000124860	processed_transcript		16	-1	13839336	623
ENSMUSG00000106773	TEC	Gm43799	ENSMUST00000201845	TEC		5	-1	73647591	579
ENSMUSG00000048922	protein_coding	Cdca2	ENSMUST00000150006	protein_coding	principal1	14	-1	67715841	3568
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000144913	processed_transcript		16	-1	13840332	669
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000204100	processed_transcript		6	1	137754546	317
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000148848	retained_intron		16	-1	13838361	620
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000115803	protein_coding		16	-1	13903055	1255
ENSMUSG00000083776	processed_pseudogene	Gm13473	ENSMUST00000119289	processed_pseudogene		2	1	38939343	367
ENSMUSG00000048922	protein_coding	Cdca2	ENSMUST00000131179	protein_coding		14	-1	67696734	676
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000115802	protein_coding	alternative2	16	-1	13903131	2466
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000203136	retained_intron		6	1	137754546	2834
ENSMUSG00000028763	protein_coding	Hspg2	ENSMUST00000030547	protein_coding	alternative2	4	1	137468769	14187
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000075693	protein_coding	principal1	4	1	107314363	1321
ENSMUSG00000036916	protein_coding	Zfp280c	ENSMUST00000076635	protein_coding	principal3	X	-1	48592133	4355
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000139859	retained_intron		16	-1	13876147	792
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000174421	protein_coding		5	1	47983154	7785
ENSMUSG00000048922	protein_coding	Cdca2	ENSMUST00000132705	protein_coding		14	-1	67715610	2034
ENSMUSG00000028763	protein_coding	Hspg2	ENSMUST00000238544	protein_coding		4	1	137522459	717
ENSMUSG00000022313	protein_coding	Utp23	ENSMUST00000137116	protein_coding	principal1	15	1	51877429	2921
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000151774	processed_transcript		16	-1	13902985	754
ENSMUSG00000029175	protein_coding	Slc35f6	ENSMUST00000062962	protein_coding	principal1	5	1	30647933	3088
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000170109	protein_coding	alternative1	5	1	47983154	7758
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000148551	processed_transcript		16	-1	13902975	472
ENSMUSG00000048922	protein_coding	Cdca2	ENSMUST00000130922	nonsense_mediated_decay		14	-1	67697981	647
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176668	nonsense_mediated_decay		17	-1	24527850	2667
ENSMUSG00000028763	protein_coding	Hspg2	ENSMUST00000155648	processed_transcript		4	1	137569171	820
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000197400	processed_transcript		5	1	47983158	3210
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000196024	retained_intron		5	1	47983177	2492
ENSMUSG00000022680	protein_coding	Pdxdc1	ENSMUST00000137715	retained_intron		16	-1	13902980	683
ENSMUSG00000022313	protein_coding	Utp23	ENSMUST00000161651	protein_coding		15	1	51877478	582
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000140162	processed_transcript		4	1	107314369	2672
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000173926	processed_transcript		5	1	47984994	620
ENSMUSG00000038241	protein_coding	Cep250	ENSMUST00000149905	retained_intron		2	1	155956458	4930
ENSMUSG00000022313	protein_coding	Utp23	ENSMUST00000059599	protein_coding		15	1	51877505	740
ENSMUSG00000048922	protein_coding	Cdca2	ENSMUST00000155312	retained_intron		14	-1	67715375	2419
ENSMUSG00000028763	protein_coding	Hspg2	ENSMUST00000171332	protein_coding	principal2	4	1	137468803	14176
ENSMUSG00000048922	protein_coding	Cdca2	ENSMUST00000124045	protein_coding		14	-1	67715681	1124
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000137391	processed_transcript		4	1	107343111	2927
ENSMUSG00000016356	protein_coding	Col20a1	ENSMUST00000149179	protein_coding	alternative2	2	1	180986535	3867
ENSMUSG00000022313	protein_coding	Utp23	ENSMUST00000136129	protein_coding		15	1	51877742	779
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000139527	protein_coding		4	1	107314384	937
ENSMUSG00000048922	protein_coding	Cdca2	ENSMUST00000163100	protein_coding	principal1	14	-1	67715610	3841
ENSMUSG00000029175	protein_coding	Slc35f6	ENSMUST00000196740	protein_coding		5	1	30647941	1972
ENSMUSG00000103294	processed_pseudogene	Gm38233	ENSMUST00000194259	processed_pseudogene		3	-1	65616174	807
ENSMUSG00000029175	protein_coding	Slc35f6	ENSMUST00000198025	retained_intron		5	1	30647953	5332
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000124650	protein_coding		4	1	107314437	470
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000155975	processed_transcript		4	1	107315132	224
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000174658	nonsense_mediated_decay		5	1	47987842	633
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000161732	nonsense_mediated_decay		15	1	76576359	2026
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000173774	processed_transcript		5	1	48169191	454
ENSMUSG00000029175	protein_coding	Slc35f6	ENSMUST00000143867	nonsense_mediated_decay		5	1	30647967	1443
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000124254	processed_transcript		4	1	107318971	477
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000197737	retained_intron		5	1	48174234	4798
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176086	nonsense_mediated_decay		17	-1	24527890	2687
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000128507	processed_transcript		4	1	107324655	384
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000128284	protein_coding		4	1	107314412	831
ENSMUSG00000029175	protein_coding	Slc35f6	ENSMUST00000131978	retained_intron		5	1	30647976	802
ENSMUSG00000045053	protein_coding	Kcng3	ENSMUST00000234613	protein_coding	alternative1	17	-1	83631895	3323
ENSMUSG00000029156	protein_coding	Sgcb	ENSMUST00000081170	protein_coding	principal1	5	-1	73647790	3786
ENSMUSG00000029175	protein_coding	Slc35f6	ENSMUST00000124474	nonsense_mediated_decay		5	1	30648012	1299
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000143106	processed_transcript		4	1	107344554	524
ENSMUSG00000057375	protein_coding	Yipf1	ENSMUST00000146829	processed_transcript		4	1	107315763	533
ENSMUSG00000090050	antisense	Gm16339	ENSMUST00000160954	antisense		12	-1	102129906	929
ENSMUSG00000029175	protein_coding	Slc35f6	ENSMUST00000199052	protein_coding		5	1	30656096	529
ENSMUSG00000029156	protein_coding	Sgcb	ENSMUST00000201416	retained_intron		5	-1	73644468	463
ENSMUSG00000045053	protein_coding	Kcng3	ENSMUST00000051482	protein_coding	principal2	17	-1	83631895	3356
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000173303	retained_intron		5	1	48182102	854
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176805	retained_intron		17	-1	24511033	1749
ENSMUSG00000086041	antisense	Gm12869	ENSMUST00000156265	antisense		4	-1	107351353	344
ENSMUSG00000016356	protein_coding	Col20a1	ENSMUST00000108856	protein_coding	alternative2	2	1	180986535	4489
ENSMUSG00000082279	processed_pseudogene	Gm12870	ENSMUST00000121383	processed_pseudogene		4	-1	107328499	1016
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000175732	retained_intron		17	-1	24510511	366
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000174487	processed_transcript		5	1	48189467	1915
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176530	retained_intron		17	-1	24512372	938
ENSMUSG00000022857	protein_coding	Tmprss15	ENSMUST00000023566	protein_coding	principal3	16	-1	79091092	4177
ENSMUSG00000117921	lincRNA	Gm50186	ENSMUST00000236398	lincRNA		19	1	54084559	1731
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176900	retained_intron		17	-1	24512567	861
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000067538	protein_coding	principal1	17	-1	56476483	6855
ENSMUSG00000016356	protein_coding	Col20a1	ENSMUST00000228434	protein_coding	principal2	2	1	180986535	5012
ENSMUSG00000118324	TEC	Gm50187	ENSMUST00000237525	TEC		19	1	54198391	3064
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000175698	nonsense_mediated_decay		17	-1	24513339	755
ENSMUSG00000046618	protein_coding	Olfml2a	ENSMUST00000057279	protein_coding	principal1	2	1	38931978	5579
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000172824	processed_transcript		5	1	48223471	826
ENSMUSG00000117755	processed_pseudogene	Gm50188	ENSMUST00000236789	processed_pseudogene		19	1	54444980	225
ENSMUSG00000022857	protein_coding	Tmprss15	ENSMUST00000060402	protein_coding	alternative2	16	-1	79091097	3681
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000177502	nonsense_mediated_decay		17	-1	24514738	641
ENSMUSG00000016356	protein_coding	Col20a1	ENSMUST00000152473	nonsense_mediated_decay		2	1	181000454	441
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000223685	retained_intron		17	-1	56414430	711
ENSMUSG00000117778	antisense	Gm50384	ENSMUST00000236142	antisense		18	-1	86473929	1616
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000224522	retained_intron		17	-1	56415033	354
ENSMUSG00000030088	protein_coding	Aldh1l1	ENSMUST00000130418	protein_coding	principal1	6	1	90550789	4175
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000161783	retained_intron		15	1	76576379	2262
ENSMUSG00000118207	lincRNA	Gm50191	ENSMUST00000237661	lincRNA		19	-1	54936724	646
ENSMUSG00000037072	protein_coding	Selenof	ENSMUST00000144859	processed_transcript		3	1	144570304	825
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000225379	processed_transcript		17	-1	56422757	589
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000172484	retained_intron		5	1	48231490	3015
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176237	protein_coding		17	-1	24527863	950
ENSMUSG00000016356	protein_coding	Col20a1	ENSMUST00000155425	protein_coding		2	1	181013240	633
ENSMUSG00000085094	processed_pseudogene	Gm15692	ENSMUST00000152173	processed_pseudogene		16	1	78964096	346
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000160784	protein_coding		15	1	76576389	1998
ENSMUSG00000113881	processed_pseudogene	Gm18592	ENSMUST00000221529	processed_pseudogene		12	1	83742762	276
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000203216	protein_coding		6	1	137754556	688
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000172493	protein_coding		5	1	48238501	767
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176633	retained_intron		17	-1	24513238	500
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000159949	processed_transcript		15	1	76576405	747
ENSMUSG00000113999	processed_pseudogene	Gm47681	ENSMUST00000222400	processed_pseudogene		12	1	83758944	403
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000199024	retained_intron		5	1	48245202	2877
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000177154	protein_coding		17	-1	24527489	758
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000161311	retained_intron		15	1	76576412	2058
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000160296	processed_transcript		15	1	76576413	843
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000173671	retained_intron		5	1	48248643	1945
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000161612	nonsense_mediated_decay		15	1	76576474	1661
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000172561	retained_intron		5	1	48256573	415
ENSMUSG00000030088	protein_coding	Aldh1l1	ENSMUST00000032175	protein_coding	principal1	6	1	90550805	3052
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000229007	processed_transcript		15	1	76584524	2084
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000173646	retained_intron		5	1	48275241	518
ENSMUSG00000026826	protein_coding	Nr4a2	ENSMUST00000028166	protein_coding	principal1	2	-1	57115038	3568
ENSMUSG00000036916	protein_coding	Zfp280c	ENSMUST00000088898	protein_coding	principal3	X	-1	48594373	4024
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000159005	retained_intron		15	1	76593438	646
ENSMUSG00000031558	protein_coding	Slit2	ENSMUST00000173686	nonsense_mediated_decay		5	1	48281778	878
ENSMUSG00000030088	protein_coding	Aldh1l1	ENSMUST00000203111	protein_coding		6	1	90550843	556
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000160410	retained_intron		15	1	76593901	763
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000162254	retained_intron		15	1	76594168	704
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176324	nonsense_mediated_decay		17	-1	24527846	604
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000162139	retained_intron		15	1	76594293	1200
ENSMUSG00000016624	protein_coding	Phf21b	ENSMUST00000016768	protein_coding	alternative1	15	-1	84855110	3377
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000159049	retained_intron		15	1	76594822	267
ENSMUSG00000026826	protein_coding	Nr4a2	ENSMUST00000112629	protein_coding	principal1	2	-1	57124003	3422
ENSMUSG00000022550	protein_coding	Adck5	ENSMUST00000160094	retained_intron		15	1	76594964	598
ENSMUSG00000016624	protein_coding	Phf21b	ENSMUST00000162996	processed_transcript		15	-1	84787449	265
ENSMUSG00000037072	protein_coding	Selenof	ENSMUST00000082437	protein_coding	principal1	3	1	144570426	1514
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000177401	nonsense_mediated_decay		17	-1	24527833	699
ENSMUSG00000036916	protein_coding	Zfp280c	ENSMUST00000072292	protein_coding	alternative2	X	-1	48594452	4045
ENSMUSG00000029821	protein_coding	Gsdme	ENSMUST00000165099	protein_coding	alternative2	6	-1	50261755	2929
ENSMUSG00000116238	TEC	Gm49413	ENSMUST00000230810	TEC		15	1	76577825	3039
ENSMUSG00000029821	protein_coding	Gsdme	ENSMUST00000101405	protein_coding	alternative2	6	-1	50261747	4383
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000072206	protein_coding	principal2	9	1	106281061	2337
ENSMUSG00000037072	protein_coding	Selenof	ENSMUST00000106211	protein_coding		3	1	144570693	1178
ENSMUSG00000037072	protein_coding	Selenof	ENSMUST00000198936	retained_intron		3	1	144570714	2699
ENSMUSG00000082092	processed_pseudogene	Gm14665	ENSMUST00000122294	processed_pseudogene		X	1	61389027	557
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176178	nonsense_mediated_decay		17	-1	24527911	680
ENSMUSG00000030088	protein_coding	Aldh1l1	ENSMUST00000204796	nonsense_mediated_decay		6	1	90550848	3025
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000177193	protein_coding		17	-1	24527548	644
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000143018	processed_transcript		17	-1	56476369	2706
ENSMUSG00000016624	protein_coding	Phf21b	ENSMUST00000159939	protein_coding	principal2	15	-1	84856049	3639
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000191434	protein_coding	alternative2	9	1	106281380	1242
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000177405	nonsense_mediated_decay		17	-1	24527846	606
ENSMUSG00000037072	protein_coding	Selenof	ENSMUST00000151086	protein_coding		3	1	144577652	698
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000216228	protein_coding		9	1	106281582	1431
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000224777	protein_coding		17	-1	56427994	625
ENSMUSG00000037072	protein_coding	Selenof	ENSMUST00000198279	retained_intron		3	1	144590425	1166
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000231777	protein_coding	alternative2	7	1	90477231	7801
ENSMUSG00000026826	protein_coding	Nr4a2	ENSMUST00000183542	nonsense_mediated_decay		2	-1	57124003	3123
ENSMUSG00000030088	protein_coding	Aldh1l1	ENSMUST00000152436	processed_transcript		6	1	90567706	472
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000177025	nonsense_mediated_decay		17	-1	24527821	428
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000223706	retained_intron		17	-1	56425133	724
ENSMUSG00000030088	protein_coding	Aldh1l1	ENSMUST00000137669	retained_intron		6	1	90589350	653
ENSMUSG00000029821	protein_coding	Gsdme	ENSMUST00000031845	protein_coding	principal2	6	-1	50263862	2502
ENSMUSG00000105045	processed_pseudogene	Rpl9-ps8	ENSMUST00000198343	processed_pseudogene		3	-1	144625964	562
ENSMUSG00000026826	protein_coding	Nr4a2	ENSMUST00000112627	protein_coding		2	-1	57113072	2400
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000107196	protein_coding	principal2	7	1	91090706	7490
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000223783	retained_intron		17	-1	56425461	679
ENSMUSG00000108111	lincRNA	Gm45901	ENSMUST00000203807	lincRNA		6	1	90486393	661
ENSMUSG00000029821	protein_coding	Gsdme	ENSMUST00000167893	protein_coding		6	-1	50262026	689
ENSMUSG00000108271	TEC	Gm44236	ENSMUST00000204492	TEC		6	1	90513302	513
ENSMUSG00000036916	protein_coding	Zfp280c	ENSMUST00000114940	protein_coding	alternative2	X	-1	48591761	3863
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000214540	nonsense_mediated_decay		9	1	106281602	1431
ENSMUSG00000026826	protein_coding	Nr4a2	ENSMUST00000140165	processed_transcript		2	-1	57115038	1099
ENSMUSG00000029821	protein_coding	Gsdme	ENSMUST00000204700	retained_intron		6	-1	50261975	2595
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000225456	protein_coding		17	-1	56435009	1344
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000217213	protein_coding		9	1	106281610	1398
ENSMUSG00000026826	protein_coding	Nr4a2	ENSMUST00000128776	processed_transcript		2	-1	57114373	182
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000214483	protein_coding		9	1	106282884	1278
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000216306	protein_coding		9	1	106282884	1308
ENSMUSG00000036916	protein_coding	Zfp280c	ENSMUST00000143028	retained_intron		X	-1	48543704	832
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000214208	protein_coding		9	1	106282884	1250
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000225104	retained_intron		17	-1	56429282	764
ENSMUSG00000042248	protein_coding	Cyp2c37	ENSMUST00000049178	protein_coding	principal1	19	1	39992424	1824
ENSMUSG00000029821	protein_coding	Gsdme	ENSMUST00000170142	protein_coding	principal2	6	-1	50261769	2133
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176434	retained_intron		17	-1	24527850	559
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000223642	protein_coding		17	-1	56434982	626
ENSMUSG00000115539	processed_pseudogene	Gm6997	ENSMUST00000227296	processed_pseudogene		14	-1	78966568	620
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000177139	processed_transcript		17	-1	24527868	332
ENSMUSG00000115167	antisense	Gm49015	ENSMUST00000226853	antisense		14	-1	79151389	2704
ENSMUSG00000016624	protein_coding	Phf21b	ENSMUST00000162044	nonsense_mediated_decay		15	-1	84855751	2568
ENSMUSG00000025475	protein_coding	Adgra1	ENSMUST00000026548	protein_coding	principal1	7	1	139834174	4758
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176092	processed_transcript		17	-1	24527851	382
ENSMUSG00000021747	protein_coding	4930452B06Rik	ENSMUST00000102996	protein_coding	principal1	14	-1	8666240	2681
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000176361	retained_intron		17	-1	24527784	693
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000188660	processed_transcript		9	1	106290839	1521
ENSMUSG00000016624	protein_coding	Phf21b	ENSMUST00000159502	retained_intron		15	-1	84791494	324
ENSMUSG00000115090	antisense	Gm49016	ENSMUST00000228931	antisense		14	-1	78947227	614
ENSMUSG00000085108	antisense	Saxo1os	ENSMUST00000131790	antisense		4	1	86558446	628
ENSMUSG00000025475	protein_coding	Adgra1	ENSMUST00000137584	processed_transcript		7	1	139834365	416
ENSMUSG00000036916	protein_coding	Zfp280c	ENSMUST00000149058	processed_transcript		X	-1	48594391	363
ENSMUSG00000115643	processed_pseudogene	Gm49011	ENSMUST00000227294	processed_pseudogene		14	1	79105709	171
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000225785	processed_transcript		17	-1	56435985	914
ENSMUSG00000016624	protein_coding	Phf21b	ENSMUST00000160389	retained_intron		15	-1	84803557	725
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000189325	processed_transcript		9	1	106300758	727
ENSMUSG00000115637	processed_pseudogene	Gm30970	ENSMUST00000227710	processed_pseudogene		14	-1	79106401	363
ENSMUSG00000025475	protein_coding	Adgra1	ENSMUST00000129454	retained_intron		7	1	139834962	1413
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000223671	retained_intron		17	-1	56434955	738
ENSMUSG00000098118	unprocessed_pseudogene	Gm26960	ENSMUST00000182263	unprocessed_pseudogene		X	1	153114053	412
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000223691	retained_intron		17	-1	56434685	687
ENSMUSG00000036916	protein_coding	Zfp280c	ENSMUST00000150501	processed_transcript		X	-1	48594504	842
ENSMUSG00000050321	protein_coding	Neto1	ENSMUST00000058829	protein_coding	principal1	18	1	86394952	8352
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000070777	protein_coding		17	-1	24519208	2384
ENSMUSG00000023345	protein_coding	Poc1a	ENSMUST00000186366	processed_transcript		9	1	106327728	533
ENSMUSG00000075254	protein_coding	Heg1	ENSMUST00000232568	protein_coding	alternative2	16	1	33684370	4187
ENSMUSG00000021747	protein_coding	4930452B06Rik	ENSMUST00000225744	processed_transcript		14	-1	8666239	2390
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000225381	processed_transcript		17	-1	56476444	943
ENSMUSG00000052752	protein_coding	Traf7	ENSMUST00000088464	protein_coding	principal1	17	-1	24519208	2504
ENSMUSG00000099879	antisense	Gm29123	ENSMUST00000185808	antisense		9	-1	106335833	3657
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000224571	retained_intron		17	-1	56476389	2336
ENSMUSG00000050321	protein_coding	Neto1	ENSMUST00000236600	processed_transcript		18	1	86395821	384
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000224006	retained_intron		17	-1	56447626	410
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000223742	protein_coding		17	-1	56474627	440
ENSMUSG00000050321	protein_coding	Neto1	ENSMUST00000235167	protein_coding		18	1	86498956	527
ENSMUSG00000071665	protein_coding	Foxr2	ENSMUST00000096265	protein_coding	principal1	X	1	153118786	3210
ENSMUSG00000009115	protein_coding	Spatc1l	ENSMUST00000009259	protein_coding	principal1	10	1	76562272	1332
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000146563	retained_intron		7	1	91090726	4236
ENSMUSG00000001773	protein_coding	Folh1	ENSMUST00000001824	protein_coding	principal3	7	-1	86775943	3125
ENSMUSG00000061613	protein_coding	U2af1	ENSMUST00000166526	protein_coding	alternative2	17	-1	31658769	923
ENSMUSG00000075254	protein_coding	Heg1	ENSMUST00000154863	retained_intron		16	1	33684466	3294
ENSMUSG00000071665	protein_coding	Foxr2	ENSMUST00000163801	protein_coding	principal1	X	1	153126897	3072
ENSMUSG00000013236	protein_coding	Ptprs	ENSMUST00000224193	retained_intron		17	-1	56462161	4547
ENSMUSG00000026568	protein_coding	Mpc2	ENSMUST00000195026	retained_intron		1	1	165460637	4015
ENSMUSG00000009115	protein_coding	Spatc1l	ENSMUST00000105414	protein_coding		10	1	76562309	1060
ENSMUSG00000103767	TEC	Gm37858	ENSMUST00000192759	TEC		1	-1	177636937	1231
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000074273	protein_coding	alternative2	7	1	91090728	5278
ENSMUSG00000021476	protein_coding	Habp4	ENSMUST00000221904	nonsense_mediated_decay		13	1	64161824	4903
ENSMUSG00000085468	antisense	Gm15343	ENSMUST00000136382	antisense		10	-1	76570532	640
ENSMUSG00000075254	protein_coding	Heg1	ENSMUST00000152782	protein_coding	alternative2	16	1	33684466	8161
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000239136	protein_coding		7	1	91542810	540
ENSMUSG00000001773	protein_coding	Folh1	ENSMUST00000107271	protein_coding	alternative2	7	-1	86775808	2516
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000238788	retained_intron		7	1	91543089	1216
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000238619	protein_coding		7	1	91672292	7559
ENSMUSG00000067596	transcribed_unitary_pseudogene	Krt74	ENSMUST00000088018	processed_transcript		15	-1	101763504	1589
ENSMUSG00000001773	protein_coding	Folh1	ENSMUST00000209082	retained_intron		7	-1	86762956	505
ENSMUSG00000061613	protein_coding	U2af1	ENSMUST00000014684	protein_coding	principal3	17	-1	31658892	1046
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000238467	protein_coding		7	1	91672374	7573
ENSMUSG00000075254	protein_coding	Heg1	ENSMUST00000126532	protein_coding	principal5	16	1	33684545	6714
ENSMUSG00000067596	transcribed_unitary_pseudogene	Krt74	ENSMUST00000229279	transcribed_unitary_pseudogene		15	-1	101763438	1489
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000152139	retained_intron		7	1	91672492	2934
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000238608	protein_coding		7	1	91672492	7401
ENSMUSG00000075254	protein_coding	Heg1	ENSMUST00000132797	processed_transcript		16	1	33731601	555
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000128592	processed_transcript		7	1	91711420	922
ENSMUSG00000031933	protein_coding	Izumo1r	ENSMUST00000069408	protein_coding		9	-1	14903884	1172
ENSMUSG00000026568	protein_coding	Mpc2	ENSMUST00000027853	protein_coding	principal1	1	1	165461037	1025
ENSMUSG00000075254	protein_coding	Heg1	ENSMUST00000152832	retained_intron		16	1	33753156	332
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000107193	protein_coding		7	1	91711420	4910
ENSMUSG00000022323	protein_coding	Rida	ENSMUST00000022946	protein_coding	principal1	15	-1	34495255	1004
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000098308	protein_coding		7	1	92062394	2329
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000134469	protein_coding		15	-1	81190733	4392
ENSMUSG00000026568	protein_coding	Mpc2	ENSMUST00000128633	retained_intron		1	1	165461224	3029
ENSMUSG00000031933	protein_coding	Izumo1r	ENSMUST00000117620	protein_coding		9	-1	14903949	1095
ENSMUSG00000075254	protein_coding	Heg1	ENSMUST00000128105	protein_coding		16	1	33755550	3656
ENSMUSG00000026568	protein_coding	Mpc2	ENSMUST00000193575	nonsense_mediated_decay		1	1	165461365	468
ENSMUSG00000036943	protein_coding	Rab8b	ENSMUST00000041139	protein_coding	principal1	9	-1	66919687	4733
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000239114	protein_coding		15	-1	81190757	4366
ENSMUSG00000075254	protein_coding	Heg1	ENSMUST00000146518	retained_intron		16	1	33756523	347
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000233440	retained_intron		17	-1	28622487	4804
ENSMUSG00000026568	protein_coding	Mpc2	ENSMUST00000138999	processed_transcript		1	1	165478142	493
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000129818	retained_intron		7	1	92180684	2218
ENSMUSG00000103763	TEC	Gm37860	ENSMUST00000195380	TEC		1	1	165467500	1034
ENSMUSG00000031933	protein_coding	Izumo1r	ENSMUST00000034409	protein_coding	principal1	9	-1	14903932	1291
ENSMUSG00000053716	protein_coding	Dusp7	ENSMUST00000172306	protein_coding	principal1	9	1	106368632	3213
ENSMUSG00000021476	protein_coding	Habp4	ENSMUST00000021929	protein_coding	principal1	13	1	64161869	2564
ENSMUSG00000044573	protein_coding	Acp1	ENSMUST00000062740	protein_coding	principal3	12	-1	30911571	3066
ENSMUSG00000022323	protein_coding	Rida	ENSMUST00000125286	retained_intron		15	-1	34489800	2986
ENSMUSG00000038148	protein_coding	Cldn16	ENSMUST00000161053	protein_coding	principal1	16	1	26463135	1173
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000087675	protein_coding	principal1	6	1	137754558	1729
ENSMUSG00000053716	protein_coding	Dusp7	ENSMUST00000173051	processed_transcript		9	1	106369612	270
ENSMUSG00000031933	protein_coding	Izumo1r	ENSMUST00000121116	protein_coding		9	-1	14903756	726
ENSMUSG00000021476	protein_coding	Habp4	ENSMUST00000221264	processed_transcript		13	1	64162246	471
ENSMUSG00000053716	protein_coding	Dusp7	ENSMUST00000173748	protein_coding		9	1	106370744	658
ENSMUSG00000021476	protein_coding	Habp4	ENSMUST00000223328	processed_transcript		13	1	64162246	329
ENSMUSG00000109212	protein_coding	Olfr126	ENSMUST00000213844	protein_coding	principal1	17	1	37847483	1958
ENSMUSG00000031933	protein_coding	Izumo1r	ENSMUST00000148155	protein_coding		9	-1	14903754	566
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000109579	protein_coding	principal1	15	-1	81105083	4154
ENSMUSG00000109212	protein_coding	Olfr126	ENSMUST00000217487	protein_coding	principal1	17	1	37847512	1859
ENSMUSG00000038902	protein_coding	Pogz	ENSMUST00000107270	protein_coding	principal3	3	1	94837567	6399
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000203693	protein_coding		6	1	137754576	1446
ENSMUSG00000022323	protein_coding	Rida	ENSMUST00000141154	retained_intron		15	-1	34495171	1111
ENSMUSG00000021476	protein_coding	Habp4	ENSMUST00000222806	processed_transcript		13	1	64174100	739
ENSMUSG00000038148	protein_coding	Cldn16	ENSMUST00000115302	protein_coding	principal1	16	1	26463256	950
ENSMUSG00000109212	protein_coding	Olfr126	ENSMUST00000174139	protein_coding	principal1	17	1	37850594	960
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000131235	protein_coding		15	-1	81190723	4222
ENSMUSG00000022323	protein_coding	Rida	ENSMUST00000129426	processed_transcript		15	-1	34489686	337
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000203340	processed_transcript		6	1	137754591	679
ENSMUSG00000021476	protein_coding	Habp4	ENSMUST00000223377	retained_intron		13	1	64184503	828
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000043552	protein_coding	principal3	13	-1	33936198	1547
ENSMUSG00000020048	protein_coding	Hsp90b1	ENSMUST00000020238	protein_coding	principal1	10	-1	86705509	2825
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000204356	protein_coding		6	1	137754615	554
ENSMUSG00000038902	protein_coding	Pogz	ENSMUST00000107265	processed_transcript		3	1	94837697	742
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000204544	TEC		6	1	137760667	298
ENSMUSG00000110736	unprocessed_pseudogene	Olfr942-ps1	ENSMUST00000215640	unprocessed_pseudogene		9	1	39158924	662
ENSMUSG00000053716	protein_coding	Dusp7	ENSMUST00000193878	processed_transcript		9	1	106374619	1020
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000135047	protein_coding		15	-1	81045546	2367
ENSMUSG00000020048	protein_coding	Hsp90b1	ENSMUST00000129413	protein_coding		10	-1	86698438	1119
ENSMUSG00000092458	processed_pseudogene	Gm18737	ENSMUST00000173594	processed_pseudogene		17	1	37860807	937
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000138769	retained_intron		15	-1	81018188	702
ENSMUSG00000041771	protein_coding	Slc24a4	ENSMUST00000159329	protein_coding	alternative2	12	1	102128733	4465
ENSMUSG00000091972	protein_coding	Tmem207	ENSMUST00000231658	retained_intron		16	-1	26526769	2690
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000145779	retained_intron		15	-1	81021302	627
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000203046	processed_transcript		6	1	137772373	579
ENSMUSG00000092468	processed_pseudogene	Gm18520	ENSMUST00000174783	processed_pseudogene		17	-1	37886031	658
ENSMUSG00000020048	protein_coding	Hsp90b1	ENSMUST00000134515	retained_intron		10	-1	86695721	654
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000203754	retained_intron		6	1	137777993	377
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000154797	retained_intron		15	-1	81023970	499
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000204779	protein_coding		6	1	137780823	769
ENSMUSG00000020048	protein_coding	Hsp90b1	ENSMUST00000146897	retained_intron		10	-1	86703093	268
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000204976	processed_transcript		6	1	137796834	227
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000123243	retained_intron		15	-1	81190728	849
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000239267	protein_coding		15	-1	81067012	429
ENSMUSG00000038902	protein_coding	Pogz	ENSMUST00000126235	retained_intron		3	1	94837713	2933
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000203507	protein_coding		6	1	137830289	362
ENSMUSG00000038902	protein_coding	Pogz	ENSMUST00000107266	protein_coding	alternative2	3	1	94837713	4100
ENSMUSG00000044573	protein_coding	Acp1	ENSMUST00000074038	protein_coding	alternative1	12	-1	30911589	2754
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000147921	retained_intron		15	-1	81190522	500
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000205060	retained_intron		6	1	137835557	2524
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000017188	protein_coding	alternative2	13	-1	33935996	1504
ENSMUSG00000030225	protein_coding	Dera	ENSMUST00000204723	protein_coding		6	1	137836852	334
ENSMUSG00000091972	protein_coding	Tmem207	ENSMUST00000165687	protein_coding	principal1	16	-1	26526762	766
ENSMUSG00000023110	protein_coding	Prmt5	ENSMUST00000023873	protein_coding	principal1	14	-1	54517525	2691
ENSMUSG00000111597	unprocessed_pseudogene	Olfr989-ps1	ENSMUST00000214405	unprocessed_pseudogene		2	-1	85380487	912
ENSMUSG00000042292	protein_coding	Mrtfa	ENSMUST00000149582	protein_coding		15	-1	81190757	4366
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000171951	processed_transcript		13	-1	33922059	569
ENSMUSG00000038902	protein_coding	Pogz	ENSMUST00000042402	protein_coding	alternative2	3	1	94837713	4775
ENSMUSG00000044573	protein_coding	Acp1	ENSMUST00000219697	nonsense_mediated_decay		12	-1	30911571	668
ENSMUSG00000041771	protein_coding	Slc24a4	ENSMUST00000079020	protein_coding	alternative2	12	1	102129174	2337
ENSMUSG00000023110	protein_coding	Prmt5	ENSMUST00000139964	protein_coding		14	-1	54513456	609
ENSMUSG00000049410	protein_coding	Zfp683	ENSMUST00000105884	protein_coding	principal1	4	1	134053838	1471
ENSMUSG00000038902	protein_coding	Pogz	ENSMUST00000107269	protein_coding		3	1	94837713	5966
ENSMUSG00000044573	protein_coding	Acp1	ENSMUST00000218615	retained_intron		12	-1	30898119	531
ENSMUSG00000041771	protein_coding	Slc24a4	ENSMUST00000161325	protein_coding		12	1	102129391	1955
ENSMUSG00000038902	protein_coding	Pogz	ENSMUST00000132544	retained_intron		3	1	94863728	744
ENSMUSG00000082712	unprocessed_pseudogene	Olfr990-ps1	ENSMUST00000120485	unprocessed_pseudogene		2	-1	85389035	904
ENSMUSG00000044573	protein_coding	Acp1	ENSMUST00000218696	retained_intron		12	-1	30911563	499
ENSMUSG00000038902	protein_coding	Pogz	ENSMUST00000140397	nonsense_mediated_decay		3	1	94864519	517
ENSMUSG00000084217	unitary_pseudogene	Gm15488	ENSMUST00000121682	unitary_pseudogene		13	-1	111724334	670
ENSMUSG00000038902	protein_coding	Pogz	ENSMUST00000125638	processed_transcript		3	1	94871312	279
ENSMUSG00000044573	protein_coding	Acp1	ENSMUST00000222791	processed_transcript		12	-1	30911549	307
ENSMUSG00000047938	processed_transcript	4930483J18Rik	ENSMUST00000138675	processed_transcript		15	1	81190774	881
ENSMUSG00000097898	lincRNA	4930455B14Rik	ENSMUST00000223613	lincRNA		14	1	8666386	640
ENSMUSG00000041771	protein_coding	Slc24a4	ENSMUST00000235018	protein_coding	principal2	12	1	102129419	2092
ENSMUSG00000110978	unprocessed_pseudogene	Olfr991-ps1	ENSMUST00000215967	unprocessed_pseudogene		2	-1	85398616	908
ENSMUSG00000029426	protein_coding	Scarb2	ENSMUST00000031377	protein_coding	principal1	5	-1	92505637	4698
ENSMUSG00000038902	protein_coding	Pogz	ENSMUST00000142253	retained_intron		3	1	94877655	777
ENSMUSG00000056605	protein_coding	Krt72	ENSMUST00000071104	protein_coding	principal1	15	-1	101786460	1953
ENSMUSG00000086480	antisense	Gm15287	ENSMUST00000132564	antisense		13	1	111725517	751
ENSMUSG00000061613	protein_coding	U2af1	ENSMUST00000237323	nonsense_mediated_decay		17	-1	31658755	975
ENSMUSG00000110400	TEC	Gm45416	ENSMUST00000209713	TEC		7	-1	141518603	2201
ENSMUSG00000047938	processed_transcript	4930483J18Rik	ENSMUST00000138715	processed_transcript		15	1	81190853	1093
ENSMUSG00000097898	lincRNA	4930455B14Rik	ENSMUST00000180444	lincRNA		14	1	8666390	824
ENSMUSG00000115976	antisense	Gm31462	ENSMUST00000230118	antisense		15	-1	81006410	544
ENSMUSG00000056605	protein_coding	Krt72	ENSMUST00000127671	processed_transcript		15	-1	101778693	715
ENSMUSG00000061613	protein_coding	U2af1	ENSMUST00000238046	nonsense_mediated_decay		17	-1	31658764	722
ENSMUSG00000018770	protein_coding	Atp5g3	ENSMUST00000111996	protein_coding	principal1	2	-1	73911325	723
ENSMUSG00000097898	lincRNA	4930455B14Rik	ENSMUST00000181914	lincRNA		14	1	8666390	987
ENSMUSG00000029426	protein_coding	Scarb2	ENSMUST00000201253	retained_intron		5	-1	92506833	2033
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000171034	protein_coding		13	-1	34002794	930
ENSMUSG00000061613	protein_coding	U2af1	ENSMUST00000236293	retained_intron		17	-1	31649312	861
ENSMUSG00000097898	lincRNA	4930455B14Rik	ENSMUST00000224776	lincRNA		14	1	8666446	848
ENSMUSG00000018770	protein_coding	Atp5g3	ENSMUST00000018914	protein_coding	principal1	2	-1	73911326	714
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000167260	protein_coding		13	-1	33935875	892
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000207798	processed_transcript		7	1	92180781	842
ENSMUSG00000061613	protein_coding	U2af1	ENSMUST00000236475	protein_coding		17	-1	31658741	532
ENSMUSG00000041658	protein_coding	Rragb	ENSMUST00000039720	protein_coding	principal1	X	1	153139981	2258
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000171252	protein_coding		13	-1	33935955	833
ENSMUSG00000061613	protein_coding	U2af1	ENSMUST00000236260	processed_transcript		17	-1	31656490	539
ENSMUSG00000041658	protein_coding	Rragb	ENSMUST00000144175	protein_coding		X	1	153139987	847
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000138389	processed_transcript		7	1	92234923	3218
ENSMUSG00000061613	protein_coding	U2af1	ENSMUST00000235600	retained_intron		17	-1	31658738	541
ENSMUSG00000054204	protein_coding	Alkal2	ENSMUST00000067087	protein_coding	principal1	12	1	30884322	1509
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000168350	protein_coding		13	-1	33935848	578
ENSMUSG00000018770	protein_coding	Atp5g3	ENSMUST00000142768	processed_transcript		2	-1	73911282	862
ENSMUSG00000061613	protein_coding	U2af1	ENSMUST00000235969	retained_intron		17	-1	31658703	703
ENSMUSG00000082733	processed_pseudogene	Gm15153	ENSMUST00000119867	processed_pseudogene		X	1	153221170	274
ENSMUSG00000023110	protein_coding	Prmt5	ENSMUST00000132227	nonsense_mediated_decay		14	-1	54517435	1094
ENSMUSG00000018770	protein_coding	Atp5g3	ENSMUST00000131045	processed_transcript		2	-1	73910459	791
ENSMUSG00000112045	processed_pseudogene	Gm5649	ENSMUST00000217918	processed_pseudogene		10	-1	26384094	951
ENSMUSG00000112797	lincRNA	Gm30034	ENSMUST00000219589	lincRNA		10	1	26493098	248
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000171985	retained_intron		13	-1	33935978	2191
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000135581	processed_transcript		7	1	92234980	964
ENSMUSG00000018770	protein_coding	Atp5g3	ENSMUST00000155474	processed_transcript		2	-1	73911291	770
ENSMUSG00000040471	protein_coding	Ggt6	ENSMUST00000076443	protein_coding	principal1	11	1	72435526	1818
ENSMUSG00000111882	unitary_pseudogene	Gm48864	ENSMUST00000218590	unitary_pseudogene		10	1	26610747	233
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000208377	processed_transcript		7	1	92235127	672
ENSMUSG00000112889	TEC	Gm47073	ENSMUST00000220118	TEC		10	-1	82852647	1393
ENSMUSG00000036611	protein_coding	Eepd1	ENSMUST00000040677	protein_coding	principal1	9	1	25481547	2723
ENSMUSG00000052572	protein_coding	Dlg2	ENSMUST00000207891	retained_intron		7	1	92427669	448
ENSMUSG00000098179	processed_pseudogene	Gm8709	ENSMUST00000183230	processed_pseudogene		10	-1	26674612	1012
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000164627	protein_coding		13	-1	33935977	722
ENSMUSG00000041649	protein_coding	Klf8	ENSMUST00000143880	protein_coding		X	1	153237466	247
ENSMUSG00000109574	TEC	B230206I08Rik	ENSMUST00000207479	TEC		7	1	92408184	3191
ENSMUSG00000112375	bidirectional_promoter_lncRNA	Gm38560	ENSMUST00000220169	bidirectional_promoter_lncRNA		10	-1	82859008	646
ENSMUSG00000112675	processed_pseudogene	Gm48892	ENSMUST00000219999	processed_pseudogene		10	-1	26742556	478
ENSMUSG00000040471	protein_coding	Ggt6	ENSMUST00000108499	protein_coding		11	1	72435534	874
ENSMUSG00000040471	protein_coding	Ggt6	ENSMUST00000100903	protein_coding		11	1	72435614	1387
ENSMUSG00000112389	processed_pseudogene	Gm48891	ENSMUST00000219202	processed_pseudogene		10	-1	26741563	138
ENSMUSG00000109217	TEC	Gm44676	ENSMUST00000208520	TEC		7	1	91608956	3055
ENSMUSG00000023110	protein_coding	Prmt5	ENSMUST00000147214	nonsense_mediated_decay		14	-1	54517393	811
ENSMUSG00000108920	TEC	Gm44678	ENSMUST00000207828	TEC		7	1	91340016	2775
ENSMUSG00000111950	lincRNA	Gm48893	ENSMUST00000218733	lincRNA		10	1	26695574	741
ENSMUSG00000036611	protein_coding	Eepd1	ENSMUST00000156237	processed_transcript		9	1	25482867	665
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000168400	protein_coding		13	-1	34002767	783
ENSMUSG00000108819	TEC	Gm45177	ENSMUST00000209104	TEC		7	1	91139964	2307
ENSMUSG00000026176	protein_coding	Ctdsp1	ENSMUST00000027367	protein_coding	principal1	1	1	74391509	2876
ENSMUSG00000108777	lincRNA	Gm45081	ENSMUST00000206281	lincRNA		7	-1	66079473	572
ENSMUSG00000109353	TEC	Gm45183	ENSMUST00000207937	TEC		7	1	91304695	1497
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000170991	protein_coding		13	-1	33935954	437
ENSMUSG00000026295	protein_coding	Spp2	ENSMUST00000027518	protein_coding	principal1	1	1	88406961	928
ENSMUSG00000023110	protein_coding	Prmt5	ENSMUST00000133552	retained_intron		14	-1	54517470	1692
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000166354	protein_coding		13	-1	34002786	536
ENSMUSG00000023110	protein_coding	Prmt5	ENSMUST00000138367	processed_transcript		14	-1	54515658	521
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000167237	protein_coding		13	-1	34002740	457
ENSMUSG00000109382	antisense	4930567K12Rik	ENSMUST00000207593	antisense		7	-1	92119511	1281
ENSMUSG00000026295	protein_coding	Spp2	ENSMUST00000176708	protein_coding		1	1	88407279	710
ENSMUSG00000026176	protein_coding	Ctdsp1	ENSMUST00000141175	retained_intron		1	1	74391795	2957
ENSMUSG00000023110	protein_coding	Prmt5	ENSMUST00000132801	processed_transcript		14	-1	54517361	338
ENSMUSG00000026295	protein_coding	Spp2	ENSMUST00000189225	nonsense_mediated_decay		1	1	88407406	444
ENSMUSG00000109562	TEC	Gm45178	ENSMUST00000207744	TEC		7	1	90995309	4110
ENSMUSG00000083343	processed_pseudogene	Gm14666	ENSMUST00000121121	processed_pseudogene		X	1	61480453	843
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000167597	processed_transcript		13	-1	34002767	663
ENSMUSG00000109256	TEC	Gm44681	ENSMUST00000208447	TEC		7	1	91647711	842
ENSMUSG00000026176	protein_coding	Ctdsp1	ENSMUST00000152659	protein_coding		1	1	74392162	393
ENSMUSG00000080910	processed_pseudogene	Gm14821	ENSMUST00000121975	processed_pseudogene		X	-1	61619200	435
ENSMUSG00000109074	processed_pseudogene	Gm45162	ENSMUST00000209013	processed_pseudogene		7	-1	90812161	618
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000170620	processed_transcript		13	-1	34002770	972
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000076532	protein_coding	principal3	13	-1	34002794	1504
ENSMUSG00000083158	processed_pseudogene	Gm14655	ENSMUST00000120124	processed_pseudogene		X	1	61620150	578
ENSMUSG00000017146	protein_coding	Brca1	ENSMUST00000017290	protein_coding	principal1	11	-1	101551879	6572
ENSMUSG00000109431	TEC	Gm45161	ENSMUST00000207316	TEC		7	-1	90887706	2263
ENSMUSG00000109044	TEC	Gm44680	ENSMUST00000208414	TEC		7	1	91635239	2910
ENSMUSG00000060147	protein_coding	Serpinb6a	ENSMUST00000167163	protein_coding	principal3	13	-1	33936083	1654
ENSMUSG00000033684	protein_coding	Qsox1	ENSMUST00000195419	retained_intron		1	-1	155779423	3395
ENSMUSG00000048758	protein_coding	Rpl29	ENSMUST00000150576	protein_coding	principal1	9	1	106429454	733
ENSMUSG00000109239	TEC	Gm45176	ENSMUST00000207696	TEC		7	1	91131841	4096
ENSMUSG00000017146	protein_coding	Brca1	ENSMUST00000156843	retained_intron		11	-1	101508178	2136
ENSMUSG00000048758	protein_coding	Rpl29	ENSMUST00000098994	protein_coding	principal1	9	1	106429538	583
ENSMUSG00000109505	TEC	Gm44677	ENSMUST00000209151	TEC		7	1	91627272	3739
ENSMUSG00000017146	protein_coding	Brca1	ENSMUST00000131460	retained_intron		11	-1	101522459	539
ENSMUSG00000109320	TEC	Gm44679	ENSMUST00000207202	TEC		7	1	91519115	2908
ENSMUSG00000017146	protein_coding	Brca1	ENSMUST00000191198	protein_coding		11	-1	101524858	531
ENSMUSG00000109370	TEC	Gm44675	ENSMUST00000208188	TEC		7	1	91564367	2927
ENSMUSG00000108953	TEC	Gm45129	ENSMUST00000208444	TEC		7	1	91908063	2224
ENSMUSG00000017146	protein_coding	Brca1	ENSMUST00000188168	processed_transcript		11	-1	101525206	852
ENSMUSG00000109481	TEC	Gm45130	ENSMUST00000207574	TEC		7	1	91816167	3388
ENSMUSG00000048758	protein_coding	Rpl29	ENSMUST00000059802	protein_coding	principal1	9	1	106429539	710
ENSMUSG00000038976	protein_coding	Ppp1r9b	ENSMUST00000038696	protein_coding	principal2	11	1	94991035	4508
ENSMUSG00000041782	protein_coding	Lad1	ENSMUST00000038760	protein_coding	principal1	1	1	135818598	2993
ENSMUSG00000109031	TEC	Gm45201	ENSMUST00000207187	TEC		7	1	92431170	2679
ENSMUSG00000109037	TEC	C030038I04Rik	ENSMUST00000207840	TEC		7	1	91689469	740
ENSMUSG00000048758	protein_coding	Rpl29	ENSMUST00000213448	protein_coding		9	1	106429555	845
ENSMUSG00000109242	TEC	A930002H02Rik	ENSMUST00000208672	TEC		7	1	90871603	1178
ENSMUSG00000038976	protein_coding	Ppp1r9b	ENSMUST00000151771	processed_transcript		11	1	94992880	610
ENSMUSG00000109191	TEC	Gm45131	ENSMUST00000208051	TEC		7	1	92064593	2582
ENSMUSG00000017146	protein_coding	Brca1	ENSMUST00000142086	nonsense_mediated_decay		11	-1	101551955	1917
ENSMUSG00000038976	protein_coding	Ppp1r9b	ENSMUST00000107748	protein_coding	alternative2	11	1	94996064	3095
ENSMUSG00000048758	protein_coding	Rpl29	ENSMUST00000217081	protein_coding		9	1	106429562	466
ENSMUSG00000041649	protein_coding	Klf8	ENSMUST00000112574	protein_coding	principal1	X	1	153237748	4752
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000029850	protein_coding	principal1	3	1	154596711	2507
ENSMUSG00000017146	protein_coding	Brca1	ENSMUST00000190862	protein_coding		11	-1	101551582	355
ENSMUSG00000048758	protein_coding	Rpl29	ENSMUST00000214067	protein_coding		9	1	106431069	403
ENSMUSG00000041782	protein_coding	Lad1	ENSMUST00000190773	processed_transcript		1	1	135829995	942
ENSMUSG00000110541	lincRNA	Gm10280	ENSMUST00000212238	lincRNA		8	1	113067262	2006
ENSMUSG00000041782	protein_coding	Lad1	ENSMUST00000185756	processed_transcript		1	1	135830534	758
ENSMUSG00000103131	TEC	Gm37977	ENSMUST00000193096	TEC		1	-1	59887689	721
ENSMUSG00000052253	protein_coding	Zfp622	ENSMUST00000227912	retained_intron		15	1	25984366	4485
ENSMUSG00000025140	protein_coding	Pycr1	ENSMUST00000026133	protein_coding	principal1	11	-1	120643748	1861
ENSMUSG00000005410	protein_coding	Mcm5	ENSMUST00000164309	protein_coding	principal1	8	1	75109569	3381
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000184537	nonsense_mediated_decay		3	1	154596711	2606
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000194876	protein_coding		3	1	154597144	1059
ENSMUSG00000074582	protein_coding	Arfgef2	ENSMUST00000099078	protein_coding	principal1	2	1	166805588	8770
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000155385	protein_coding		3	1	154597197	755
ENSMUSG00000025140	protein_coding	Pycr1	ENSMUST00000141254	protein_coding		11	-1	120643643	840
ENSMUSG00000041649	protein_coding	Klf8	ENSMUST00000039545	protein_coding	principal1	X	1	153359613	4407
ENSMUSG00000005410	protein_coding	Mcm5	ENSMUST00000212426	protein_coding	principal1	8	1	75109576	2604
ENSMUSG00000074582	protein_coding	Arfgef2	ENSMUST00000144847	protein_coding		2	1	166827657	849
ENSMUSG00000005410	protein_coding	Mcm5	ENSMUST00000212811	protein_coding	principal1	8	1	75109624	2653
ENSMUSG00000025140	protein_coding	Pycr1	ENSMUST00000151876	protein_coding		11	-1	120643704	542
ENSMUSG00000104234	antisense	5330439B14Rik	ENSMUST00000194811	antisense		6	1	142614595	1392
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000135723	nonsense_mediated_decay		3	1	154597222	795
ENSMUSG00000025140	protein_coding	Pycr1	ENSMUST00000139706	protein_coding		11	-1	120643769	605
ENSMUSG00000029535	protein_coding	Triap1	ENSMUST00000031508	protein_coding	principal1	5	1	115341225	1088
ENSMUSG00000005410	protein_coding	Mcm5	ENSMUST00000212648	retained_intron		8	1	75120900	760
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000140644	protein_coding		3	1	154597352	473
ENSMUSG00000025140	protein_coding	Pycr1	ENSMUST00000133908	retained_intron		11	-1	120643704	372
ENSMUSG00000079197	protein_coding	Psme2	ENSMUST00000161807	protein_coding	principal1	14	-1	55591087	962
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000144764	protein_coding		3	1	154597402	581
ENSMUSG00000005410	protein_coding	Mcm5	ENSMUST00000211912	retained_intron		8	1	75123067	595
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000155232	protein_coding		3	1	154597438	641
ENSMUSG00000025140	protein_coding	Pycr1	ENSMUST00000170556	protein_coding	principal1	11	-1	120643670	2914
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000195103	protein_coding		3	1	154606447	513
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000195292	retained_intron		3	1	154615884	3476
ENSMUSG00000082956	unprocessed_pseudogene	Naip3	ENSMUST00000118082	unprocessed_pseudogene		13	-1	100378960	4208
ENSMUSG00000028199	protein_coding	Cryz	ENSMUST00000192462	protein_coding	principal1	3	1	154596711	2505
ENSMUSG00000041346	protein_coding	Wrap53	ENSMUST00000155894	processed_transcript		11	-1	69563922	985
ENSMUSG00000069744	protein_coding	Psmb3	ENSMUST00000103147	protein_coding	principal1	11	1	97703399	766
ENSMUSG00000004843	protein_coding	Chmp2b	ENSMUST00000231259	protein_coding		16	-1	65562520	1722
ENSMUSG00000063661	protein_coding	Krt73	ENSMUST00000063292	protein_coding	principal1	15	-1	101802346	2168
ENSMUSG00000079197	protein_coding	Psme2	ENSMUST00000161573	retained_intron		14	-1	55588604	490
ENSMUSG00000004843	protein_coding	Chmp2b	ENSMUST00000004965	protein_coding	principal1	16	-1	65562726	1872
ENSMUSG00000052253	protein_coding	Zfp622	ENSMUST00000061875	protein_coding	principal1	15	1	25984366	2802
ENSMUSG00000115616	lincRNA	Gm48923	ENSMUST00000226818	lincRNA		15	1	51897087	400
ENSMUSG00000069744	protein_coding	Psmb3	ENSMUST00000138265	retained_intron		11	1	97703434	1509
ENSMUSG00000052253	protein_coding	Zfp622	ENSMUST00000226884	protein_coding		15	1	25986795	723
ENSMUSG00000116578	processed_pseudogene	Gm49633	ENSMUST00000232570	processed_pseudogene		16	-1	65613419	298
ENSMUSG00000052253	protein_coding	Zfp622	ENSMUST00000227093	retained_intron		15	1	25995036	1475
ENSMUSG00000116622	processed_pseudogene	Gm5221	ENSMUST00000231905	processed_pseudogene		16	1	65793371	967
ENSMUSG00000069744	protein_coding	Psmb3	ENSMUST00000129197	retained_intron		11	1	97712062	578
ENSMUSG00000116841	processed_pseudogene	Gm49737	ENSMUST00000232237	processed_pseudogene		16	-1	42184917	146
ENSMUSG00000116990	processed_pseudogene	Gm49738	ENSMUST00000231310	processed_pseudogene		16	-1	42197402	356
ENSMUSG00000079197	protein_coding	Psme2	ENSMUST00000162700	retained_intron		14	-1	55589511	826
ENSMUSG00000079197	protein_coding	Psme2	ENSMUST00000161027	retained_intron		14	-1	55590149	511
ENSMUSG00000100908	lincRNA	Gm28888	ENSMUST00000186556	lincRNA		1	1	88459683	316
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000174628	protein_coding	alternative2	9	1	50856924	2195
ENSMUSG00000079197	protein_coding	Psme2	ENSMUST00000159687	protein_coding		14	-1	55591113	564
ENSMUSG00000099553	lincRNA	Gm29538	ENSMUST00000190783	lincRNA		1	-1	88462608	471
ENSMUSG00000036446	protein_coding	Lum	ENSMUST00000038160	protein_coding	principal1	10	1	97565128	2448
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000027401	protein_coding	principal1	1	1	75210838	2876
ENSMUSG00000112484	lincRNA	4930473O22Rik	ENSMUST00000218283	lincRNA		10	-1	97596931	1465
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000034560	protein_coding	principal4	9	1	50856924	3647
ENSMUSG00000025511	protein_coding	Tspan4	ENSMUST00000026585	protein_coding	principal1	7	1	141475240	1466
ENSMUSG00000027439	protein_coding	Gzf1	ENSMUST00000028928	protein_coding	principal1	2	1	148681023	4232
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000139627	retained_intron		1	1	75210846	839
ENSMUSG00000025511	protein_coding	Tspan4	ENSMUST00000138092	protein_coding		7	1	141475510	530
ENSMUSG00000079197	protein_coding	Psme2	ENSMUST00000159282	retained_intron		14	-1	55590864	591
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000144355	protein_coding		1	1	75210848	691
ENSMUSG00000025511	protein_coding	Tspan4	ENSMUST00000146305	protein_coding		7	1	141475513	731
ENSMUSG00000036781	protein_coding	Rps27l	ENSMUST00000040917	protein_coding	principal1	9	1	66946086	499
ENSMUSG00000079197	protein_coding	Psme2	ENSMUST00000162496	retained_intron		14	-1	55590973	633
ENSMUSG00000025511	protein_coding	Tspan4	ENSMUST00000140858	protein_coding		7	1	141475736	373
ENSMUSG00000062393	protein_coding	Dgkk	ENSMUST00000145302	protein_coding		X	1	6873484	6827
ENSMUSG00000079197	protein_coding	Psme2	ENSMUST00000159845	retained_intron		14	-1	55590948	592
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000191108	nonsense_mediated_decay		1	1	75210870	1500
ENSMUSG00000027439	protein_coding	Gzf1	ENSMUST00000131292	protein_coding		2	1	148681211	701
ENSMUSG00000022534	protein_coding	Mefv	ENSMUST00000023180	protein_coding	principal3	16	-1	3718097	3096
ENSMUSG00000079197	protein_coding	Psme2	ENSMUST00000159297	retained_intron		14	-1	55590895	185
ENSMUSG00000042096	protein_coding	Dao	ENSMUST00000112292	protein_coding	principal1	5	1	114003703	2057
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000123825	protein_coding		1	1	75210874	636
ENSMUSG00000047261	protein_coding	Gap43	ENSMUST00000102817	protein_coding	principal1	16	-1	42340651	1420
ENSMUSG00000027439	protein_coding	Gzf1	ENSMUST00000151362	processed_transcript		2	1	148684612	734
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000114437	protein_coding	alternative2	9	1	50856937	3430
ENSMUSG00000062393	protein_coding	Dgkk	ENSMUST00000067410	protein_coding	principal1	X	1	6779306	7155
ENSMUSG00000079197	protein_coding	Psme2	ENSMUST00000111378	protein_coding		14	-1	55591101	795
ENSMUSG00000025511	protein_coding	Tspan4	ENSMUST00000117634	protein_coding	principal1	7	1	141476400	1281
ENSMUSG00000047261	protein_coding	Gap43	ENSMUST00000125187	processed_transcript		16	-1	42276072	760
ENSMUSG00000042096	protein_coding	Dao	ENSMUST00000086599	protein_coding		5	1	114003884	1525
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000175645	protein_coding		9	1	50856957	1931
ENSMUSG00000036781	protein_coding	Rps27l	ENSMUST00000127896	protein_coding		9	1	66946091	575
ENSMUSG00000116846	lincRNA	1810044K17Rik	ENSMUST00000232030	lincRNA		16	1	93368239	536
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000176349	protein_coding		9	1	50856963	1890
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000176798	protein_coding	alternative2	9	1	50856964	2074
ENSMUSG00000035594	protein_coding	Chrna5	ENSMUST00000093844	protein_coding	principal2	9	1	54980880	1877
ENSMUSG00000094970	protein_coding	Olfr943	ENSMUST00000213507	nonsense_mediated_decay		9	1	39166304	3392
ENSMUSG00000042096	protein_coding	Dao	ENSMUST00000161610	protein_coding	principal1	5	1	114004808	1633
ENSMUSG00000025511	protein_coding	Tspan4	ENSMUST00000239217	protein_coding		7	1	141482064	1157
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000175640	protein_coding		9	1	50856966	1523
ENSMUSG00000036781	protein_coding	Rps27l	ENSMUST00000147394	nonsense_mediated_decay		9	1	66946166	452
ENSMUSG00000022534	protein_coding	Mefv	ENSMUST00000229725	protein_coding	alternative2	16	-1	3718085	2584
ENSMUSG00000035594	protein_coding	Chrna5	ENSMUST00000216865	processed_transcript		9	1	54980894	424
ENSMUSG00000062310	protein_coding	Glrp1	ENSMUST00000067625	protein_coding	principal1	1	-1	88510066	1957
ENSMUSG00000042096	protein_coding	Dao	ENSMUST00000199175	protein_coding		5	1	114009891	685
ENSMUSG00000025511	protein_coding	Tspan4	ENSMUST00000130402	retained_intron		7	1	141491489	577
ENSMUSG00000042096	protein_coding	Dao	ENSMUST00000162214	retained_intron		5	1	114017092	801
ENSMUSG00000035594	protein_coding	Chrna5	ENSMUST00000217408	protein_coding		9	1	54981466	2446
ENSMUSG00000101746	lincRNA	2310043L19Rik	ENSMUST00000189507	lincRNA		1	-1	177642943	698
ENSMUSG00000041346	protein_coding	Wrap53	ENSMUST00000048139	protein_coding	principal1	11	-1	69579324	1891
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000135484	retained_intron		1	1	75210876	1570
ENSMUSG00000035594	protein_coding	Chrna5	ENSMUST00000213960	protein_coding	alternative2	9	1	54981533	1737
ENSMUSG00000036781	protein_coding	Rps27l	ENSMUST00000143044	processed_transcript		9	1	66946355	566
ENSMUSG00000036781	protein_coding	Rps27l	ENSMUST00000146573	protein_coding		9	1	66947642	271
ENSMUSG00000064201	protein_coding	Krt2	ENSMUST00000023712	protein_coding	principal1	15	-1	101818169	2613
ENSMUSG00000041346	protein_coding	Wrap53	ENSMUST00000132548	protein_coding		11	-1	69580255	827
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000142052	processed_transcript		1	1	75210880	786
ENSMUSG00000040093	protein_coding	Bmf	ENSMUST00000090219	protein_coding		2	-1	118549687	4642
ENSMUSG00000036781	protein_coding	Rps27l	ENSMUST00000123931	retained_intron		9	1	66948563	338
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000189698	protein_coding		1	1	75211054	851
ENSMUSG00000110693	lincRNA	Gm45899	ENSMUST00000212196	lincRNA		8	1	75176458	1276
ENSMUSG00000022534	protein_coding	Mefv	ENSMUST00000100222	protein_coding	alternative2	16	-1	3718085	2739
ENSMUSG00000080743	processed_pseudogene	Gm7150	ENSMUST00000122032	processed_pseudogene		X	-1	153404070	981
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000188460	protein_coding		1	1	75211240	652
ENSMUSG00000110640	lincRNA	Gm45903	ENSMUST00000212891	lincRNA		8	1	75201439	2898
ENSMUSG00000094970	protein_coding	Olfr943	ENSMUST00000213830	protein_coding	alternative2	9	1	39166310	8305
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000126328	retained_intron		1	1	75211962	619
ENSMUSG00000109561	protein_coding	Ankrd31	ENSMUST00000208758	protein_coding		13	1	96748272	5859
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000175926	nonsense_mediated_decay		9	1	50856979	2303
ENSMUSG00000109561	protein_coding	Ankrd31	ENSMUST00000207464	protein_coding	principal1	13	1	96748532	5146
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000145144	retained_intron		1	1	75212003	636
ENSMUSG00000040093	protein_coding	Bmf	ENSMUST00000110859	protein_coding		2	-1	118547559	3078
ENSMUSG00000094970	protein_coding	Olfr943	ENSMUST00000215770	protein_coding	alternative2	9	1	39166310	8308
ENSMUSG00000026223	protein_coding	Itm2c	ENSMUST00000027425	protein_coding	principal1	1	1	85894281	2230
ENSMUSG00000094970	protein_coding	Olfr943	ENSMUST00000213176	protein_coding	alternative2	9	1	39166310	8275
ENSMUSG00000050148	protein_coding	Ubqln2	ENSMUST00000060714	protein_coding	principal1	X	1	153498227	3344
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000186492	retained_intron		1	1	75212005	401
ENSMUSG00000113899	processed_pseudogene	Gm9595	ENSMUST00000222177	processed_pseudogene		13	1	61723588	744
ENSMUSG00000094970	protein_coding	Olfr943	ENSMUST00000071617	protein_coding	principal2	9	1	39166310	1079
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000186350	retained_intron		1	1	75212399	605
ENSMUSG00000084184	unprocessed_pseudogene	Gm13474	ENSMUST00000122466	unprocessed_pseudogene		2	1	38973947	815
ENSMUSG00000087017	processed_transcript	4930417H01Rik	ENSMUST00000123403	processed_transcript		2	1	122708043	1233
ENSMUSG00000021587	protein_coding	Pcsk1	ENSMUST00000022075	protein_coding	principal1	13	1	75089826	5040
ENSMUSG00000061330	processed_pseudogene	Gm6436	ENSMUST00000077163	processed_pseudogene		13	-1	61711371	451
ENSMUSG00000040093	protein_coding	Bmf	ENSMUST00000143583	processed_transcript		2	-1	118544587	905
ENSMUSG00000026223	protein_coding	Itm2c	ENSMUST00000185569	protein_coding		1	1	85894619	1465
ENSMUSG00000110875	processed_pseudogene	Gm47100	ENSMUST00000213716	processed_pseudogene		9	-1	39189152	150
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000176055	nonsense_mediated_decay		9	1	50870084	907
ENSMUSG00000109561	protein_coding	Ankrd31	ENSMUST00000208004	processed_transcript		13	1	96786596	625
ENSMUSG00000113728	processed_pseudogene	Gm7622	ENSMUST00000222707	processed_pseudogene		13	1	61665941	1200
ENSMUSG00000080799	processed_pseudogene	Gm15166	ENSMUST00000120790	processed_pseudogene		X	-1	153509396	385
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000131738	processed_transcript		1	1	75212624	610
ENSMUSG00000021408	protein_coding	Ripk1	ENSMUST00000021844	protein_coding	principal1	13	1	34002363	3266
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000177454	processed_transcript		9	1	50873012	721
ENSMUSG00000040093	protein_coding	Bmf	ENSMUST00000154521	processed_transcript		2	-1	118545316	840
ENSMUSG00000081910	processed_pseudogene	Gm15986	ENSMUST00000122153	processed_pseudogene		3	1	103694798	400
ENSMUSG00000026223	protein_coding	Itm2c	ENSMUST00000139837	retained_intron		1	1	85906161	768
ENSMUSG00000113295	lincRNA	Gm49357	ENSMUST00000222397	lincRNA		13	1	61655303	378
ENSMUSG00000113879	processed_pseudogene	Gm48580	ENSMUST00000222172	processed_pseudogene		13	-1	96777930	644
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000189242	retained_intron		1	1	75212632	819
ENSMUSG00000113046	processed_pseudogene	Gm48579	ENSMUST00000221106	processed_pseudogene		13	-1	96870606	307
ENSMUSG00000113471	lincRNA	Gm48116	ENSMUST00000220710	lincRNA		13	1	61709556	792
ENSMUSG00000032058	protein_coding	Ppp2r1b	ENSMUST00000176414	retained_intron		9	1	50878085	547
ENSMUSG00000097954	processed_pseudogene	Gm4217	ENSMUST00000182243	processed_pseudogene		15	1	84866317	1002
ENSMUSG00000021587	protein_coding	Pcsk1	ENSMUST00000135349	retained_intron		13	1	75089916	1419
ENSMUSG00000040093	protein_coding	Bmf	ENSMUST00000152123	processed_transcript		2	-1	118549662	361
ENSMUSG00000021408	protein_coding	Ripk1	ENSMUST00000163418	retained_intron		13	1	34002400	2121
ENSMUSG00000114023	processed_pseudogene	Gm6474	ENSMUST00000223250	processed_pseudogene		13	-1	61687980	699
ENSMUSG00000021587	protein_coding	Pcsk1	ENSMUST00000222727	protein_coding		13	1	75110818	466
ENSMUSG00000103433	processed_pseudogene	Gm2272	ENSMUST00000194903	processed_pseudogene		1	1	191407666	582
ENSMUSG00000040093	protein_coding	Bmf	ENSMUST00000125860	protein_coding	principal1	2	-1	118547027	578
ENSMUSG00000058114	protein_coding	Olfr127	ENSMUST00000217223	protein_coding	principal1	17	1	37900437	3733
ENSMUSG00000026201	protein_coding	Stk16	ENSMUST00000156012	retained_intron		1	1	75213061	855
ENSMUSG00000087017	processed_transcript	4930417H01Rik	ENSMUST00000148977	processed_transcript		2	1	122702905	673
ENSMUSG00000058114	protein_coding	Olfr127	ENSMUST00000076331	protein_coding	principal1	17	1	37903522	1095
ENSMUSG00000040093	protein_coding	Bmf	ENSMUST00000146962	processed_transcript		2	-1	118547599	411
ENSMUSG00000047583	protein_coding	Tyw3	ENSMUST00000052774	protein_coding	principal1	3	-1	154597095	4490
ENSMUSG00000021408	protein_coding	Ripk1	ENSMUST00000167374	protein_coding	principal1	13	1	34002874	6472
ENSMUSG00000107118	TEC	Gm42986	ENSMUST00000201618	TEC		5	1	129945580	3385
ENSMUSG00000103114	lincRNA	Gm32200	ENSMUST00000192778	lincRNA		1	-1	191465048	2385
ENSMUSG00000106757	TEC	Gm43482	ENSMUST00000202797	TEC		5	1	129964366	1861
ENSMUSG00000104341	processed_pseudogene	Gm37688	ENSMUST00000195195	processed_pseudogene		1	1	191477331	465
ENSMUSG00000021408	protein_coding	Ripk1	ENSMUST00000171137	protein_coding		13	1	34009698	1792
ENSMUSG00000052631	protein_coding	Sh2d6	ENSMUST00000162561	protein_coding	alternative2	6	-1	72520627	1266
ENSMUSG00000059030	protein_coding	Olfr128	ENSMUST00000216440	protein_coding	principal1	17	1	37920548	3644
ENSMUSG00000047583	protein_coding	Tyw3	ENSMUST00000148680	processed_transcript		3	-1	154594534	627
ENSMUSG00000040093	protein_coding	Bmf	ENSMUST00000138342	processed_transcript		2	-1	118549675	447
ENSMUSG00000048573	protein_coding	Cypt3	ENSMUST00000112573	protein_coding	alternative2	X	1	153558593	669
ENSMUSG00000047583	protein_coding	Tyw3	ENSMUST00000122976	protein_coding		3	-1	154597104	488
ENSMUSG00000021408	protein_coding	Ripk1	ENSMUST00000222176	retained_intron		13	1	34015244	570
ENSMUSG00000052631	protein_coding	Sh2d6	ENSMUST00000160123	protein_coding		6	-1	72520036	980
ENSMUSG00000112363	processed_pseudogene	Gm4178	ENSMUST00000218307	processed_pseudogene		10	-1	127133496	649
ENSMUSG00000052631	protein_coding	Sh2d6	ENSMUST00000234038	protein_coding	alternative2	6	-1	72520036	1166
ENSMUSG00000052631	protein_coding	Sh2d6	ENSMUST00000235004	protein_coding	alternative2	6	-1	72520036	1239
ENSMUSG00000002205	protein_coding	Vrk3	ENSMUST00000002275	protein_coding	principal1	7	1	44748413	1969
ENSMUSG00000047583	protein_coding	Tyw3	ENSMUST00000170461	protein_coding		3	-1	154597098	4270
ENSMUSG00000059030	protein_coding	Olfr128	ENSMUST00000080231	protein_coding	principal1	17	1	37923506	1050
ENSMUSG00000052631	protein_coding	Sh2d6	ENSMUST00000234220	protein_coding	alternative2	6	-1	72520617	1254
ENSMUSG00000048573	protein_coding	Cypt3	ENSMUST00000056754	protein_coding	principal3	X	1	153558593	666
ENSMUSG00000034472	protein_coding	Rasd2	ENSMUST00000139848	protein_coding	principal1	8	1	75213944	2810
ENSMUSG00000052631	protein_coding	Sh2d6	ENSMUST00000159877	protein_coding	alternative2	6	-1	72520650	1214
ENSMUSG00000113029	antisense	Gm40578	ENSMUST00000221429	antisense		12	-1	111499622	920
ENSMUSG00000113029	antisense	Gm40578	ENSMUST00000220837	antisense		12	-1	111500840	390
ENSMUSG00000087017	processed_transcript	4930417H01Rik	ENSMUST00000134411	processed_transcript		2	1	122702907	589
ENSMUSG00000083488	processed_pseudogene	Gm8534	ENSMUST00000118553	processed_pseudogene		X	1	153656606	766
ENSMUSG00000087017	processed_transcript	4930417H01Rik	ENSMUST00000142323	processed_transcript		2	1	122702047	543
ENSMUSG00000034472	protein_coding	Rasd2	ENSMUST00000132133	protein_coding	principal1	8	1	75214502	1299
ENSMUSG00000002205	protein_coding	Vrk3	ENSMUST00000134750	retained_intron		7	1	44748485	729
ENSMUSG00000087017	processed_transcript	4930417H01Rik	ENSMUST00000153728	processed_transcript		2	1	122704234	424
ENSMUSG00000027848	protein_coding	Olfml3	ENSMUST00000157042	processed_transcript		3	-1	103734229	467
ENSMUSG00000087017	processed_transcript	4930417H01Rik	ENSMUST00000155018	processed_transcript		2	1	122704236	349
ENSMUSG00000052631	protein_coding	Sh2d6	ENSMUST00000160761	nonsense_mediated_decay		6	-1	72521689	1308
ENSMUSG00000100967	protein_coding	Gm29666	ENSMUST00000189185	protein_coding	principal1	15	-1	84920038	8038
ENSMUSG00000002205	protein_coding	Vrk3	ENSMUST00000171821	protein_coding		7	1	44748584	428
ENSMUSG00000052631	protein_coding	Sh2d6	ENSMUST00000234615	protein_coding	principal5	6	-1	72521707	1381
ENSMUSG00000058997	protein_coding	Vwa8	ENSMUST00000040990	protein_coding	principal1	14	1	78849052	7054
ENSMUSG00000010529	protein_coding	Gm266	ENSMUST00000010673	protein_coding	principal1	12	-1	111485823	1215
ENSMUSG00000052631	protein_coding	Sh2d6	ENSMUST00000159577	nonsense_mediated_decay		6	-1	72520015	1109
ENSMUSG00000110515	processed_pseudogene	Gm9644	ENSMUST00000212828	processed_pseudogene		8	-1	75275664	1183
ENSMUSG00000110432	processed_pseudogene	Gm45907	ENSMUST00000213023	processed_pseudogene		8	1	75294570	193
ENSMUSG00000052631	protein_coding	Sh2d6	ENSMUST00000089687	protein_coding	alternative2	6	-1	72520538	1162
ENSMUSG00000116491	lincRNA	4930513L16Rik	ENSMUST00000230387	lincRNA		15	1	84906642	868
ENSMUSG00000046834	protein_coding	Krt1	ENSMUST00000023790	protein_coding	principal1	15	-1	101850794	2455
ENSMUSG00000078862	protein_coding	Gm14326	ENSMUST00000108932	protein_coding		2	-1	177957288	888
ENSMUSG00000110543	processed_pseudogene	Umpk-ps	ENSMUST00000211897	processed_pseudogene		8	1	75383802	827
ENSMUSG00000049891	processed_pseudogene	Gm7984	ENSMUST00000060640	processed_pseudogene		8	1	75398511	538
ENSMUSG00000026202	protein_coding	Tuba4a	ENSMUST00000186213	protein_coding	principal1	1	-1	75219294	2840
ENSMUSG00000046834	protein_coding	Krt1	ENSMUST00000231047	retained_intron		15	-1	101848961	3133
ENSMUSG00000110668	processed_pseudogene	Gm19885	ENSMUST00000212853	processed_pseudogene		8	1	75401968	343
ENSMUSG00000058997	protein_coding	Vwa8	ENSMUST00000227676	retained_intron		14	1	78849192	3823
ENSMUSG00000078862	protein_coding	Gm14326	ENSMUST00000108930	protein_coding	principal1	2	-1	177957297	1807
ENSMUSG00000046834	protein_coding	Krt1	ENSMUST00000230798	retained_intron		15	-1	101846594	429
ENSMUSG00000070934	protein_coding	Rraga	ENSMUST00000091064	protein_coding	principal1	4	1	86575668	1618
ENSMUSG00000066735	protein_coding	Vkorc1l1	ENSMUST00000051758	protein_coding	principal1	5	1	129941970	3112
ENSMUSG00000095905	processed_pseudogene	Selenok-ps4	ENSMUST00000178835	processed_pseudogene		13	1	61799903	277
ENSMUSG00000078862	protein_coding	Gm14326	ENSMUST00000108928	protein_coding		2	-1	177957239	767
ENSMUSG00000026202	protein_coding	Tuba4a	ENSMUST00000079464	protein_coding		1	-1	75218624	2083
ENSMUSG00000078862	protein_coding	Gm14326	ENSMUST00000178829	protein_coding	principal1	2	-1	177953684	1665
ENSMUSG00000027848	protein_coding	Olfml3	ENSMUST00000029440	protein_coding	principal1	3	-1	103738001	5465
ENSMUSG00000026202	protein_coding	Tuba4a	ENSMUST00000188593	protein_coding		1	-1	75217434	1205
ENSMUSG00000110469	protein_coding	Gm10358	ENSMUST00000212864	protein_coding	principal1	8	-1	75406589	1250
ENSMUSG00000074579	protein_coding	Lekr1	ENSMUST00000099075	protein_coding		3	1	65666228	2461
ENSMUSG00000058997	protein_coding	Vwa8	ENSMUST00000228884	processed_transcript		14	1	78849244	3236
ENSMUSG00000026202	protein_coding	Tuba4a	ENSMUST00000186971	protein_coding		1	-1	75217414	845
ENSMUSG00000113626	transcribed_processed_pseudogene	Gm7240	ENSMUST00000221961	processed_transcript		13	1	61804257	353
ENSMUSG00000058997	protein_coding	Vwa8	ENSMUST00000227255	protein_coding		14	1	78849254	3406
ENSMUSG00000113626	transcribed_processed_pseudogene	Gm7240	ENSMUST00000222701	processed_transcript		13	1	61804266	419
ENSMUSG00000027848	protein_coding	Olfml3	ENSMUST00000154145	retained_intron		3	-1	103737968	3981
ENSMUSG00000002205	protein_coding	Vrk3	ENSMUST00000147952	nonsense_mediated_decay		7	1	44748636	1521
ENSMUSG00000113626	transcribed_processed_pseudogene	Gm7240	ENSMUST00000222847	processed_transcript		13	1	61804266	2239
ENSMUSG00000027848	protein_coding	Olfml3	ENSMUST00000169286	protein_coding		3	-1	103732553	874
ENSMUSG00000113626	transcribed_processed_pseudogene	Gm7240	ENSMUST00000220769	transcribed_processed_pseudogene		13	1	61860816	664
ENSMUSG00000002205	protein_coding	Vrk3	ENSMUST00000165957	protein_coding		7	1	44748646	761
ENSMUSG00000002205	protein_coding	Vrk3	ENSMUST00000144515	protein_coding		7	1	44748647	595
ENSMUSG00000026202	protein_coding	Tuba4a	ENSMUST00000187103	retained_intron		1	-1	75219243	815
ENSMUSG00000113887	processed_pseudogene	Gm35619	ENSMUST00000222548	processed_pseudogene		13	1	61917549	600
ENSMUSG00000031657	protein_coding	Heatr3	ENSMUST00000034079	protein_coding	principal1	8	1	88137855	3251
ENSMUSG00000041633	protein_coding	Kctd12b	ENSMUST00000039424	protein_coding	principal1	X	-1	153696280	4795
ENSMUSG00000066735	protein_coding	Vkorc1l1	ENSMUST00000201855	protein_coding		5	1	129942109	4809
ENSMUSG00000058997	protein_coding	Vwa8	ENSMUST00000228904	processed_transcript		14	1	79143921	2508
ENSMUSG00000002205	protein_coding	Vrk3	ENSMUST00000125705	protein_coding		7	1	44748943	657
ENSMUSG00000115111	antisense	Gm4632	ENSMUST00000228380	antisense		14	-1	79199190	529
ENSMUSG00000041633	protein_coding	Kctd12b	ENSMUST00000112572	protein_coding	principal1	X	-1	153696391	4851
ENSMUSG00000066735	protein_coding	Vkorc1l1	ENSMUST00000073945	protein_coding		5	1	129942127	650
ENSMUSG00000031657	protein_coding	Heatr3	ENSMUST00000121949	protein_coding		8	1	88137856	3086
ENSMUSG00000074579	protein_coding	Lekr1	ENSMUST00000107848	processed_transcript		3	1	65666235	609
ENSMUSG00000026202	protein_coding	Tuba4a	ENSMUST00000186758	protein_coding		1	-1	75219865	782
ENSMUSG00000026202	protein_coding	Tuba4a	ENSMUST00000190717	protein_coding		1	-1	75218888	409
ENSMUSG00000033409	protein_coding	Syce1l	ENSMUST00000095173	protein_coding	principal4	8	1	113643213	791
ENSMUSG00000002205	protein_coding	Vrk3	ENSMUST00000136069	processed_transcript		7	1	44752115	735
ENSMUSG00000026202	protein_coding	Tuba4a	ENSMUST00000189131	protein_coding		1	-1	75218888	346
ENSMUSG00000066735	protein_coding	Vkorc1l1	ENSMUST00000202298	nonsense_mediated_decay		5	1	129942174	607
ENSMUSG00000002205	protein_coding	Vrk3	ENSMUST00000135783	processed_transcript		7	1	44752115	718
ENSMUSG00000031657	protein_coding	Heatr3	ENSMUST00000146946	retained_intron		8	1	88161518	1939
ENSMUSG00000002205	protein_coding	Vrk3	ENSMUST00000208083	retained_intron		7	1	44756986	4652
ENSMUSG00000114764	processed_pseudogene	Gm20241	ENSMUST00000225348	processed_pseudogene		14	1	8687419	547
ENSMUSG00000031657	protein_coding	Heatr3	ENSMUST00000131682	retained_intron		8	1	88157065	688
ENSMUSG00000034799	protein_coding	Unc13a	ENSMUST00000030170	protein_coding	principal2	8	-1	71671757	10255
ENSMUSG00000113566	lincRNA	Gm40977	ENSMUST00000222089	lincRNA		13	1	62097748	478
ENSMUSG00000031657	protein_coding	Heatr3	ENSMUST00000137452	retained_intron		8	1	88164482	600
ENSMUSG00000113566	lincRNA	Gm40977	ENSMUST00000222324	lincRNA		13	1	62097770	886
ENSMUSG00000074579	protein_coding	Lekr1	ENSMUST00000161794	processed_transcript		3	1	65666246	465
ENSMUSG00000113566	lincRNA	Gm40977	ENSMUST00000221554	lincRNA		13	1	62110440	820
ENSMUSG00000045799	processed_pseudogene	Gm9800	ENSMUST00000052615	processed_pseudogene		14	-1	8800335	336
ENSMUSG00000035295	protein_coding	Wdr38	ENSMUST00000039535	nonsense_mediated_decay		2	1	38997476	2699
ENSMUSG00000074579	protein_coding	Lekr1	ENSMUST00000195559	retained_intron		3	1	65666268	2169
ENSMUSG00000113504	processed_pseudogene	Selenok-ps5	ENSMUST00000221048	processed_pseudogene		13	1	62125729	278
ENSMUSG00000066735	protein_coding	Vkorc1l1	ENSMUST00000202486	nonsense_mediated_decay		5	1	129976994	649
ENSMUSG00000113836	transcribed_processed_pseudogene	Gm3325	ENSMUST00000220871	processed_transcript		13	1	62015605	2707
ENSMUSG00000113836	transcribed_processed_pseudogene	Gm3325	ENSMUST00000223499	processed_transcript		13	1	62015984	687
ENSMUSG00000033872	unitary_pseudogene	Best4-ps	ENSMUST00000129783	unitary_pseudogene		4	1	117145257	1380
ENSMUSG00000034799	protein_coding	Unc13a	ENSMUST00000177517	protein_coding	alternative2	8	-1	71671736	5654
ENSMUSG00000113836	transcribed_processed_pseudogene	Gm3325	ENSMUST00000221814	transcribed_processed_pseudogene		13	1	62048848	1362
ENSMUSG00000070834	processed_pseudogene	Gm13015	ENSMUST00000118674	processed_pseudogene		4	1	117148923	204
ENSMUSG00000074868	processed_pseudogene	Gm6478	ENSMUST00000099450	processed_pseudogene		13	1	62035422	742
ENSMUSG00000067225	protein_coding	Cyp2c54	ENSMUST00000048959	protein_coding	principal1	19	-1	40073827	1786
ENSMUSG00000113014	processed_pseudogene	Selenok-ps8	ENSMUST00000221926	processed_pseudogene		13	1	62006668	280
ENSMUSG00000114036	lincRNA	Gm48228	ENSMUST00000220886	lincRNA		13	-1	62126102	404
ENSMUSG00000040121	protein_coding	Rep15	ENSMUST00000036194	protein_coding	principal1	6	1	147032584	1662
ENSMUSG00000035295	protein_coding	Wdr38	ENSMUST00000112872	protein_coding	principal1	2	1	38998319	1194
ENSMUSG00000020290	protein_coding	Xpo1	ENSMUST00000102869	protein_coding	principal1	11	1	23256078	6004
ENSMUSG00000005802	protein_coding	Slc30a4	ENSMUST00000005952	protein_coding	principal1	2	-1	122702639	5458
ENSMUSG00000034799	protein_coding	Unc13a	ENSMUST00000175909	nonsense_mediated_decay		8	-1	71641397	390
ENSMUSG00000084938	processed_transcript	BB557941	ENSMUST00000126549	processed_transcript		2	-1	57181754	1097
ENSMUSG00000112018	TEC	Gm47919	ENSMUST00000220135	TEC		10	1	62023404	2212
ENSMUSG00000114413	processed_pseudogene	Gm48364	ENSMUST00000223780	processed_pseudogene		14	-1	8860050	1062
ENSMUSG00000035295	protein_coding	Wdr38	ENSMUST00000124062	processed_transcript		2	1	38998332	359
ENSMUSG00000074579	protein_coding	Lekr1	ENSMUST00000177434	protein_coding	principal1	3	1	65666268	2354
ENSMUSG00000114464	processed_pseudogene	Gm18071	ENSMUST00000225474	processed_pseudogene		14	-1	8926180	709
ENSMUSG00000086316	protein_coding	Nbdy	ENSMUST00000140575	protein_coding	principal1	X	1	153723590	788
ENSMUSG00000046687	processed_pseudogene	Gm5424	ENSMUST00000053865	processed_pseudogene		10	1	62071123	1240
ENSMUSG00000086316	protein_coding	Nbdy	ENSMUST00000208373	protein_coding	principal1	X	1	153723593	1061
ENSMUSG00000020290	protein_coding	Xpo1	ENSMUST00000102870	protein_coding	principal1	11	1	23256055	3471
ENSMUSG00000086316	protein_coding	Nbdy	ENSMUST00000185492	protein_coding	principal1	X	1	153723610	1346
ENSMUSG00000005802	protein_coding	Slc30a4	ENSMUST00000099457	protein_coding		2	-1	122702663	3170
ENSMUSG00000074579	protein_coding	Lekr1	ENSMUST00000161534	retained_intron		3	1	65666282	1509
ENSMUSG00000034799	protein_coding	Unc13a	ENSMUST00000177032	retained_intron		8	-1	71642568	1136
ENSMUSG00000086396	processed_transcript	4930555B11Rik	ENSMUST00000123210	processed_transcript		2	1	57181831	1533
ENSMUSG00000019932	protein_coding	Kera	ENSMUST00000105286	protein_coding	principal1	10	1	97606879	2280
ENSMUSG00000074579	protein_coding	Lekr1	ENSMUST00000161851	processed_transcript		3	1	65666317	1375
ENSMUSG00000080812	processed_pseudogene	Gm13526	ENSMUST00000117970	processed_pseudogene		2	-1	57214242	189
ENSMUSG00000103440	TEC	Gm37131	ENSMUST00000192502	TEC		3	-1	65864829	1561
ENSMUSG00000034799	protein_coding	Unc13a	ENSMUST00000176127	protein_coding		8	-1	71645953	721
ENSMUSG00000034799	protein_coding	Unc13a	ENSMUST00000176426	protein_coding		8	-1	71658495	761
ENSMUSG00000086316	protein_coding	Nbdy	ENSMUST00000149514	protein_coding	principal1	X	1	153723627	775
ENSMUSG00000020290	protein_coding	Xpo1	ENSMUST00000149371	processed_transcript		11	1	23256058	2902
ENSMUSG00000086316	protein_coding	Nbdy	ENSMUST00000155617	processed_transcript		X	1	153723939	485
ENSMUSG00000103620	antisense	Gm37359	ENSMUST00000195243	antisense		3	-1	65872281	526
ENSMUSG00000062704	lincRNA	9430002A10Rik	ENSMUST00000185395	lincRNA		8	1	88174560	475
ENSMUSG00000086316	protein_coding	Nbdy	ENSMUST00000208235	protein_coding		X	1	153725833	132
ENSMUSG00000020290	protein_coding	Xpo1	ENSMUST00000150750	protein_coding		11	1	23284644	698
ENSMUSG00000062704	lincRNA	9430002A10Rik	ENSMUST00000074808	lincRNA		8	1	88174560	469
ENSMUSG00000104037	TEC	Gm37776	ENSMUST00000193471	TEC		3	1	65678386	2497
ENSMUSG00000033409	protein_coding	Syce1l	ENSMUST00000034219	protein_coding	alternative2	8	1	113643218	896
ENSMUSG00000099968	lincRNA	1700029J03Rik	ENSMUST00000189879	lincRNA		16	-1	93425910	712
ENSMUSG00000099968	lincRNA	1700029J03Rik	ENSMUST00000231275	lincRNA		16	-1	93458856	884
ENSMUSG00000109128	antisense	Gm45022	ENSMUST00000208332	antisense		X	-1	153723881	545
ENSMUSG00000046949	protein_coding	Nqo2	ENSMUST00000220844	protein_coding		13	1	33964687	957
ENSMUSG00000020290	protein_coding	Xpo1	ENSMUST00000136235	protein_coding		11	1	23256589	463
ENSMUSG00000062997	protein_coding	Rpl35	ENSMUST00000080861	protein_coding	principal1	2	-1	39005624	946
ENSMUSG00000023968	protein_coding	Crip3	ENSMUST00000113465	protein_coding		17	1	46428926	1035
ENSMUSG00000099968	lincRNA	1700029J03Rik	ENSMUST00000185803	lincRNA		16	-1	93458872	789
ENSMUSG00000033409	protein_coding	Syce1l	ENSMUST00000212269	protein_coding	alternative2	8	1	113643232	753
ENSMUSG00000099968	lincRNA	1700029J03Rik	ENSMUST00000231859	lincRNA		16	-1	93458805	436
ENSMUSG00000062997	protein_coding	Rpl35	ENSMUST00000152441	processed_transcript		2	-1	39005043	541
ENSMUSG00000062997	protein_coding	Rpl35	ENSMUST00000126246	processed_transcript		2	-1	39005122	296
ENSMUSG00000067594	protein_coding	Krt77	ENSMUST00000087996	protein_coding	principal1	15	-1	101869705	2931
ENSMUSG00000116595	lincRNA	Gm30695	ENSMUST00000231757	lincRNA		16	-1	93487074	1393
ENSMUSG00000023968	protein_coding	Crip3	ENSMUST00000164180	retained_intron		17	1	46428942	943
ENSMUSG00000033409	protein_coding	Syce1l	ENSMUST00000212017	retained_intron		8	1	113643233	714
ENSMUSG00000081360	processed_pseudogene	Gm11718	ENSMUST00000119942	processed_pseudogene		11	1	107191094	537
ENSMUSG00000110581	processed_pseudogene	Gm45789	ENSMUST00000213038	processed_pseudogene		8	-1	113648263	364
ENSMUSG00000035273	protein_coding	Hpse	ENSMUST00000045617	protein_coding	principal2	5	-1	100719716	3117
ENSMUSG00000085755	antisense	Gm13496	ENSMUST00000141133	antisense		2	-1	38998258	1165
ENSMUSG00000020290	protein_coding	Xpo1	ENSMUST00000020538	protein_coding	principal1	11	1	23256041	5145
ENSMUSG00000116576	lincRNA	Gm49725	ENSMUST00000231728	lincRNA		16	1	93532388	1655
ENSMUSG00000067594	protein_coding	Krt77	ENSMUST00000229995	processed_transcript		15	-1	101869596	418
ENSMUSG00000020290	protein_coding	Xpo1	ENSMUST00000109551	protein_coding	principal1	11	1	23256041	4906
ENSMUSG00000087239	processed_pseudogene	Gm7613	ENSMUST00000139070	processed_pseudogene		9	-1	59767203	487
ENSMUSG00000035273	protein_coding	Hpse	ENSMUST00000112908	protein_coding	alternative2	5	-1	100719705	1958
ENSMUSG00000110803	antisense	Gm20275	ENSMUST00000215963	antisense		9	-1	59941077	1387
ENSMUSG00000085116	processed_pseudogene	Gm2735	ENSMUST00000136133	processed_pseudogene		9	-1	59844603	277
ENSMUSG00000023968	protein_coding	Crip3	ENSMUST00000024764	protein_coding	principal1	17	1	46428942	955
ENSMUSG00000037894	protein_coding	H2az1	ENSMUST00000041045	protein_coding	principal1	3	1	137864487	1069
ENSMUSG00000023968	protein_coding	Crip3	ENSMUST00000165993	protein_coding		17	1	46428951	735
ENSMUSG00000048012	protein_coding	Zfp473	ENSMUST00000149011	protein_coding		7	-1	44744230	9230
ENSMUSG00000034799	protein_coding	Unc13a	ENSMUST00000176777	retained_intron		8	-1	71671741	944
ENSMUSG00000084292	processed_pseudogene	Gm13535	ENSMUST00000118714	processed_pseudogene		2	-1	57275686	1884
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000139517	protein_coding	principal1	15	1	80977765	2997
ENSMUSG00000026755	protein_coding	Arpc5l	ENSMUST00000141467	processed_transcript		2	1	39005348	579
ENSMUSG00000023968	protein_coding	Crip3	ENSMUST00000165811	processed_transcript		17	1	46428970	374
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000130643	protein_coding	principal1	17	-1	28622709	4653
ENSMUSG00000032370	protein_coding	Lactb	ENSMUST00000215172	protein_coding		9	-1	66975420	1806
ENSMUSG00000034799	protein_coding	Unc13a	ENSMUST00000175780	retained_intron		8	-1	71668082	2569
ENSMUSG00000023968	protein_coding	Crip3	ENSMUST00000169441	retained_intron		17	1	46430675	710
ENSMUSG00000078908	protein_coding	Mon1b	ENSMUST00000179926	protein_coding	principal1	8	1	113635587	3470
ENSMUSG00000030664	antisense	Sox6os	ENSMUST00000032900	antisense		7	1	116031979	420
ENSMUSG00000026888	protein_coding	Grb14	ENSMUST00000134020	processed_transcript		2	-1	64915019	682
ENSMUSG00000023968	protein_coding	Crip3	ENSMUST00000165750	retained_intron		17	1	46430965	496
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000102745	protein_coding	principal2	12	1	111442469	3762
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000136504	retained_intron		17	-1	28592563	1091
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000143147	nonsense_mediated_decay		15	1	80977779	518
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000004987	nonsense_mediated_decay		17	-1	28607192	2007
ENSMUSG00000046949	protein_coding	Nqo2	ENSMUST00000058978	protein_coding	principal1	13	1	33964687	3842
ENSMUSG00000037894	protein_coding	H2az1	ENSMUST00000174561	protein_coding		3	1	137864573	810
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000232882	retained_intron		17	-1	28592794	1900
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000109792	protein_coding	alternative2	12	1	111442658	3284
ENSMUSG00000089664	unprocessed_pseudogene	Gm12494	ENSMUST00000121684	unprocessed_pseudogene		3	-1	107953121	521
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000126683	retained_intron		17	-1	28600886	4956
ENSMUSG00000078908	protein_coding	Mon1b	ENSMUST00000035777	protein_coding	principal1	8	1	113635835	4998
ENSMUSG00000067377	protein_coding	Tspan6	ENSMUST00000087557	protein_coding	principal1	X	-1	133898429	1765
ENSMUSG00000032370	protein_coding	Lactb	ENSMUST00000034929	protein_coding	principal1	9	-1	66975484	2031
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000233353	protein_coding		17	-1	28622032	1035
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000172783	nonsense_mediated_decay		12	1	111442662	664
ENSMUSG00000026827	protein_coding	Gpd2	ENSMUST00000141536	processed_transcript		2	1	57237635	2176
ENSMUSG00000046949	protein_coding	Nqo2	ENSMUST00000021843	protein_coding	principal1	13	1	33964751	1063
ENSMUSG00000082906	processed_pseudogene	Smt3h1-ps	ENSMUST00000117126	processed_pseudogene		X	1	153783340	280
ENSMUSG00000067377	protein_coding	Tspan6	ENSMUST00000176718	protein_coding		X	-1	133898294	599
ENSMUSG00000046949	protein_coding	Nqo2	ENSMUST00000223479	protein_coding		13	1	33965006	772
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000233794	protein_coding		17	-1	28622483	620
ENSMUSG00000026755	protein_coding	Arpc5l	ENSMUST00000112862	protein_coding	principal1	2	1	39008076	1339
ENSMUSG00000037894	protein_coding	H2az1	ENSMUST00000173666	processed_transcript		3	1	137864591	361
ENSMUSG00000057615	protein_coding	Ldoc1	ENSMUST00000075983	protein_coding	principal1	X	1	61709497	1459
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000145730	retained_intron		17	-1	28601263	516
ENSMUSG00000042988	protein_coding	Notum	ENSMUST00000106177	protein_coding	principal1	11	-1	120660606	2212
ENSMUSG00000046949	protein_coding	Nqo2	ENSMUST00000222740	protein_coding	principal1	13	1	33967153	995
ENSMUSG00000026755	protein_coding	Arpc5l	ENSMUST00000204825	processed_transcript		2	1	39008141	361
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000233129	protein_coding		17	-1	28622451	981
ENSMUSG00000046550	protein_coding	Spin2c	ENSMUST00000148708	protein_coding		X	1	153832225	425
ENSMUSG00000067377	protein_coding	Tspan6	ENSMUST00000176641	protein_coding		X	-1	133898294	500
ENSMUSG00000037894	protein_coding	H2az1	ENSMUST00000173790	protein_coding		3	1	137864613	437
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000232751	protein_coding		17	-1	28622451	1002
ENSMUSG00000050900	processed_pseudogene	Gm7327	ENSMUST00000120925	processed_pseudogene		X	1	61785381	652
ENSMUSG00000026755	protein_coding	Arpc5l	ENSMUST00000090993	nonsense_mediated_decay		2	1	39008157	752
ENSMUSG00000067377	protein_coding	Tspan6	ENSMUST00000177468	processed_transcript		X	-1	133898113	524
ENSMUSG00000037894	protein_coding	H2az1	ENSMUST00000172696	nonsense_mediated_decay		3	1	137864694	349
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000145023	retained_intron		17	-1	28622068	584
ENSMUSG00000082467	processed_pseudogene	Gm6743	ENSMUST00000117345	processed_pseudogene		X	1	61830510	1066
ENSMUSG00000029061	protein_coding	Mmp23	ENSMUST00000030937	protein_coding	principal1	4	-1	155653384	1434
ENSMUSG00000083702	unprocessed_pseudogene	Gm14428	ENSMUST00000120408	unprocessed_pseudogene		2	-1	177982700	822
ENSMUSG00000004865	protein_coding	Srpk1	ENSMUST00000114767	protein_coding		17	-1	28622487	1299
ENSMUSG00000046550	protein_coding	Spin2c	ENSMUST00000123264	protein_coding		X	1	153832241	536
ENSMUSG00000037894	protein_coding	H2az1	ENSMUST00000138010	retained_intron		3	1	137864980	870
ENSMUSG00000026755	protein_coding	Arpc5l	ENSMUST00000135049	processed_transcript		2	1	39010018	4167
ENSMUSG00000042988	protein_coding	Notum	ENSMUST00000106178	protein_coding	principal1	11	-1	120660829	2012
ENSMUSG00000074519	protein_coding	Zfp971	ENSMUST00000108925	protein_coding		2	1	178023284	923
ENSMUSG00000001870	protein_coding	Ltbp1	ENSMUST00000234490	protein_coding		17	1	75005568	6235
ENSMUSG00000037894	protein_coding	H2az1	ENSMUST00000125821	retained_intron		3	1	137865128	882
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000190851	retained_intron		9	-1	106438175	1467
ENSMUSG00000029061	protein_coding	Mmp23	ENSMUST00000156906	retained_intron		4	-1	155652025	1183
ENSMUSG00000074519	protein_coding	Zfp971	ENSMUST00000108926	protein_coding	principal1	2	1	178023379	1413
ENSMUSG00000046550	protein_coding	Spin2c	ENSMUST00000049999	protein_coding	principal1	X	1	153832293	1309
ENSMUSG00000001870	protein_coding	Ltbp1	ENSMUST00000001927	protein_coding		17	1	75005568	6671
ENSMUSG00000029061	protein_coding	Mmp23	ENSMUST00000130944	retained_intron		4	-1	155653207	513
ENSMUSG00000042988	protein_coding	Notum	ENSMUST00000055439	retained_intron		11	-1	120658044	1433
ENSMUSG00000034807	protein_coding	Colgalt1	ENSMUST00000047903	protein_coding	principal1	8	1	71610998	3207
ENSMUSG00000029061	protein_coding	Mmp23	ENSMUST00000139242	retained_intron		4	-1	155652892	536
ENSMUSG00000042988	protein_coding	Notum	ENSMUST00000150458	protein_coding		11	-1	120661175	728
ENSMUSG00000084875	processed_transcript	4930570D08Rik	ENSMUST00000130431	processed_transcript		X	-1	133901213	196
ENSMUSG00000033684	protein_coding	Qsox1	ENSMUST00000035325	protein_coding	principal3	1	-1	155812889	3348
ENSMUSG00000025141	protein_coding	Myadml2	ENSMUST00000239158	protein_coding	principal1	11	-1	120648110	2080
ENSMUSG00000001870	protein_coding	Ltbp1	ENSMUST00000234008	processed_transcript		17	1	75005818	823
ENSMUSG00000094802	protein_coding	Samt1	ENSMUST00000178342	protein_coding	principal1	X	-1	154012640	984
ENSMUSG00000001870	protein_coding	Ltbp1	ENSMUST00000146839	processed_transcript		17	1	75006294	519
ENSMUSG00000051592	protein_coding	Ccnb3	ENSMUST00000115752	protein_coding	principal1	X	-1	7041619	4554
ENSMUSG00000041697	protein_coding	Cox6a1	ENSMUST00000040154	protein_coding	principal1	5	-1	115348981	571
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000156003	retained_intron		12	1	111442662	3889
ENSMUSG00000033684	protein_coding	Qsox1	ENSMUST00000111764	protein_coding	alternative2	1	-1	155812851	2722
ENSMUSG00000094802	protein_coding	Samt1	ENSMUST00000178698	protein_coding	principal1	X	-1	154011264	834
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000129467	protein_coding		12	1	111444324	398
ENSMUSG00000034807	protein_coding	Colgalt1	ENSMUST00000212216	retained_intron		8	1	71611171	1894
ENSMUSG00000078861	protein_coding	Zfp931	ENSMUST00000108924	protein_coding	principal1	2	-1	178078425	962
ENSMUSG00000107502	TEC	Gm44065	ENSMUST00000203184	TEC		6	1	97148194	3527
ENSMUSG00000025141	protein_coding	Myadml2	ENSMUST00000026134	protein_coding		11	-1	120648158	931
ENSMUSG00000041697	protein_coding	Cox6a1	ENSMUST00000137766	retained_intron		5	-1	115348914	620
ENSMUSG00000078861	protein_coding	Zfp931	ENSMUST00000131702	protein_coding		2	-1	178078425	704
ENSMUSG00000051592	protein_coding	Ccnb3	ENSMUST00000056725	protein_coding	principal1	X	-1	7030936	4475
ENSMUSG00000034807	protein_coding	Colgalt1	ENSMUST00000212706	retained_intron		8	1	71620683	2860
ENSMUSG00000078861	protein_coding	Zfp931	ENSMUST00000123265	retained_intron		2	-1	178078455	1572
ENSMUSG00000078861	protein_coding	Zfp931	ENSMUST00000108923	protein_coding		2	-1	178078476	1372
ENSMUSG00000025141	protein_coding	Myadml2	ENSMUST00000145047	processed_transcript		11	-1	120647082	471
ENSMUSG00000033684	protein_coding	Qsox1	ENSMUST00000194632	protein_coding	alternative2	1	-1	155812844	2433
ENSMUSG00000094577	protein_coding	Samt1b	ENSMUST00000177994	protein_coding	principal1	X	-1	154033827	984
ENSMUSG00000053613	antisense	Notumos	ENSMUST00000151998	antisense		11	1	120659157	2659
ENSMUSG00000004038	protein_coding	Gstm3	ENSMUST00000004136	protein_coding	principal1	3	-1	107969283	1311
ENSMUSG00000094577	protein_coding	Samt1b	ENSMUST00000179369	protein_coding	principal1	X	-1	154032451	834
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000174298	nonsense_mediated_decay		12	1	111444998	1383
ENSMUSG00000033684	protein_coding	Qsox1	ENSMUST00000130701	processed_transcript		1	-1	155781996	366
ENSMUSG00000001870	protein_coding	Ltbp1	ENSMUST00000135447	protein_coding		17	1	75178810	3114
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000174692	nonsense_mediated_decay		12	1	111446084	1307
ENSMUSG00000060429	protein_coding	Sntb1	ENSMUST00000039769	protein_coding	principal1	15	-1	55906949	4919
ENSMUSG00000081409	processed_pseudogene	Gm8215	ENSMUST00000120627	processed_pseudogene		X	1	62006873	990
ENSMUSG00000083617	processed_pseudogene	Gm5390	ENSMUST00000119069	processed_pseudogene		X	-1	62136328	1230
ENSMUSG00000084822	antisense	Myadml2os	ENSMUST00000126642	antisense		11	1	120647670	1044
ENSMUSG00000048012	protein_coding	Zfp473	ENSMUST00000060270	protein_coding	principal3	7	-1	44748617	3800
ENSMUSG00000001870	protein_coding	Ltbp1	ENSMUST00000112516	protein_coding		17	1	75178810	5140
ENSMUSG00000082168	processed_pseudogene	Gm14656	ENSMUST00000120342	processed_pseudogene		X	1	62208118	502
ENSMUSG00000092295	processed_pseudogene	Gm20543	ENSMUST00000174200	processed_pseudogene		17	-1	37940788	726
ENSMUSG00000096867	protein_coding	Samt1c	ENSMUST00000144098	protein_coding	principal1	X	-1	154055039	984
ENSMUSG00000060429	protein_coding	Sntb1	ENSMUST00000110200	protein_coding		15	-1	55906722	1225
ENSMUSG00000033684	protein_coding	Qsox1	ENSMUST00000151368	retained_intron		1	-1	155812820	922
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000133865	retained_intron		12	1	111448135	417
ENSMUSG00000049231	processed_pseudogene	Gm12497	ENSMUST00000138778	processed_pseudogene		3	1	107979632	237
ENSMUSG00000060429	protein_coding	Sntb1	ENSMUST00000140574	processed_transcript		15	-1	55906310	600
ENSMUSG00000083576	processed_pseudogene	Gm16411	ENSMUST00000122164	processed_pseudogene		X	1	62255048	1100
ENSMUSG00000109710	processed_pseudogene	Gm4974	ENSMUST00000209974	processed_pseudogene		7	-1	139888351	875
ENSMUSG00000033684	protein_coding	Qsox1	ENSMUST00000132495	retained_intron		1	-1	155795417	373
ENSMUSG00000001870	protein_coding	Ltbp1	ENSMUST00000112514	protein_coding	principal1	17	1	75178911	4870
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000127207	retained_intron		12	1	111449518	770
ENSMUSG00000096555	protein_coding	Olfr944	ENSMUST00000215306	protein_coding	principal1	9	1	39201920	1523
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000173581	nonsense_mediated_decay		12	1	111449873	782
ENSMUSG00000033684	protein_coding	Qsox1	ENSMUST00000140809	retained_intron		1	-1	155812838	2664
ENSMUSG00000001870	protein_coding	Ltbp1	ENSMUST00000127458	retained_intron		17	1	75289976	1905
ENSMUSG00000048012	protein_coding	Zfp473	ENSMUST00000120798	protein_coding	alternative2	7	-1	44748391	3559
ENSMUSG00000026888	protein_coding	Grb14	ENSMUST00000149193	protein_coding		2	-1	64917240	697
ENSMUSG00000001870	protein_coding	Ltbp1	ENSMUST00000234327	protein_coding		17	1	75310156	246
ENSMUSG00000021281	protein_coding	Tnfaip2	ENSMUST00000127028	retained_intron		12	1	111450519	771
ENSMUSG00000102299	TEC	Gm37539	ENSMUST00000192644	TEC		1	1	155789124	235
ENSMUSG00000091243	protein_coding	Vgll3	ENSMUST00000168064	protein_coding	principal1	16	1	65815257	7009
ENSMUSG00000100901	processed_pseudogene	Gm18829	ENSMUST00000188150	processed_pseudogene		1	-1	59952464	1622
ENSMUSG00000096555	protein_coding	Olfr944	ENSMUST00000213908	protein_coding	principal1	9	1	39201980	1257
ENSMUSG00000001870	protein_coding	Ltbp1	ENSMUST00000135750	retained_intron		17	1	75384210	3277
ENSMUSG00000110857	processed_pseudogene	Gm48330	ENSMUST00000215641	processed_pseudogene		9	-1	25685363	369
ENSMUSG00000048012	protein_coding	Zfp473	ENSMUST00000120074	protein_coding	principal3	7	-1	44748049	3624
ENSMUSG00000111416	processed_pseudogene	Gm48331	ENSMUST00000215068	processed_pseudogene		9	1	25757555	271
ENSMUSG00000084025	processed_pseudogene	Gm6276	ENSMUST00000120159	processed_pseudogene		17	1	75165207	579
ENSMUSG00000096555	protein_coding	Olfr944	ENSMUST00000079650	protein_coding	principal1	9	1	39217359	936
ENSMUSG00000111760	processed_pseudogene	Gm48337	ENSMUST00000215632	processed_pseudogene		9	-1	25811747	202
ENSMUSG00000026018	protein_coding	Ica1l	ENSMUST00000185891	processed_transcript		1	-1	59990927	516
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000156064	retained_intron		15	1	80977820	610
ENSMUSG00000091243	protein_coding	Vgll3	ENSMUST00000227997	protein_coding		16	1	65815629	1383
ENSMUSG00000092513	processed_pseudogene	Gm20542	ENSMUST00000174582	processed_pseudogene		17	-1	37943391	372
ENSMUSG00000110866	lincRNA	Gm48362	ENSMUST00000216055	lincRNA		9	-1	25859652	3205
ENSMUSG00000048012	protein_coding	Zfp473	ENSMUST00000118162	protein_coding	alternative2	7	-1	44748306	3091
ENSMUSG00000098204	sense_intronic	Gm26984	ENSMUST00000182345	sense_intronic		3	-1	79676876	3510
ENSMUSG00000111240	lincRNA	Gm39312	ENSMUST00000213586	lincRNA		9	-1	26033479	2195
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000025425	protein_coding	principal1	18	1	67800107	8093
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000137255	protein_coding		15	1	80977820	427
ENSMUSG00000092186	processed_pseudogene	Gm5967	ENSMUST00000172723	processed_pseudogene		17	1	37947192	494
ENSMUSG00000091243	protein_coding	Vgll3	ENSMUST00000228708	processed_transcript		16	1	65828613	1846
ENSMUSG00000090949	protein_coding	Vmn2r77	ENSMUST00000233099	protein_coding	alternative2	7	1	86795027	5787
ENSMUSG00000111238	processed_pseudogene	Gm19113	ENSMUST00000217552	processed_pseudogene		9	-1	26368658	1828
ENSMUSG00000090949	protein_coding	Vmn2r77	ENSMUST00000233167	nonsense_mediated_decay		7	1	86795027	5507
ENSMUSG00000048012	protein_coding	Zfp473	ENSMUST00000140599	protein_coding		7	-1	44748349	1006
ENSMUSG00000090949	protein_coding	Vmn2r77	ENSMUST00000232688	nonsense_mediated_decay		7	1	86795027	5689
ENSMUSG00000080747	processed_pseudogene	Gm14016	ENSMUST00000119095	processed_pseudogene		2	1	118594079	486
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000137004	protein_coding		15	1	80977837	401
ENSMUSG00000111124	processed_pseudogene	Gm48373	ENSMUST00000214282	processed_pseudogene		9	-1	26386302	284
ENSMUSG00000048012	protein_coding	Zfp473	ENSMUST00000126366	protein_coding		7	-1	44751050	698
ENSMUSG00000026888	protein_coding	Grb14	ENSMUST00000150643	protein_coding		2	-1	64917315	656
ENSMUSG00000045330	protein_coding	4933402E13Rik	ENSMUST00000051414	protein_coding	principal1	X	1	62287142	1970
ENSMUSG00000116631	processed_pseudogene	Gm7366	ENSMUST00000232112	processed_pseudogene		16	1	65914961	631
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000224387	retained_intron		18	1	67800113	1425
ENSMUSG00000090949	protein_coding	Vmn2r77	ENSMUST00000164996	protein_coding	principal2	7	1	86795141	2565
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000229727	protein_coding		15	1	80977889	390
ENSMUSG00000025512	protein_coding	Chid1	ENSMUST00000153191	protein_coding	alternative1	7	-1	141539816	4182
ENSMUSG00000102566	processed_pseudogene	Gm37037	ENSMUST00000194475	processed_pseudogene		3	-1	65933908	424
ENSMUSG00000045330	protein_coding	4933402E13Rik	ENSMUST00000178085	protein_coding	principal1	X	1	62283499	1931
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000228971	protein_coding		15	1	80978057	442
ENSMUSG00000096109	protein_coding	Olfr1537	ENSMUST00000213472	protein_coding	alternative2	9	-1	39249994	4114
ENSMUSG00000025512	protein_coding	Chid1	ENSMUST00000118694	protein_coding		7	-1	141539804	3910
ENSMUSG00000019927	protein_coding	Ube2d1	ENSMUST00000020085	protein_coding	principal1	10	-1	71285262	1431
ENSMUSG00000102051	transcribed_unprocessed_pseudogene	Ly6a2	ENSMUST00000187250	processed_transcript		15	-1	75135128	730
ENSMUSG00000096109	protein_coding	Olfr1537	ENSMUST00000073248	protein_coding	principal2	9	-1	39238431	945
ENSMUSG00000116671	processed_pseudogene	Gm49635	ENSMUST00000231495	processed_pseudogene		16	1	65947106	322
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000124845	protein_coding		15	1	81006464	1968
ENSMUSG00000114154	antisense	Gm48597	ENSMUST00000222094	antisense		13	-1	96950914	543
ENSMUSG00000031278	protein_coding	Acsl4	ENSMUST00000112907	protein_coding	principal3	X	-1	142390344	5137
ENSMUSG00000102051	transcribed_unprocessed_pseudogene	Ly6a2	ENSMUST00000190944	transcribed_unprocessed_pseudogene		15	-1	75134824	405
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000225077	retained_intron		18	1	67800134	2607
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000138550	retained_intron		15	1	81007938	1078
ENSMUSG00000109376	protein_coding	Olfr761	ENSMUST00000049620	protein_coding	principal1	17	-1	37953079	1029
ENSMUSG00000111066	lincRNA	Gm30313	ENSMUST00000216806	lincRNA		9	-1	26549953	597
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000154904	protein_coding		15	1	81008359	647
ENSMUSG00000091387	protein_coding	Gcnt4	ENSMUST00000171324	protein_coding	principal1	13	1	96924689	5087
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000225303	nonsense_mediated_decay		18	1	67841010	4548
ENSMUSG00000019927	protein_coding	Ube2d1	ENSMUST00000144636	retained_intron		10	-1	71256888	490
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000223571	retained_intron		18	1	67851346	456
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000225677	retained_intron		18	1	67853659	497
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000134559	retained_intron		15	1	81009250	672
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000223715	retained_intron		18	1	67854061	323
ENSMUSG00000092213	processed_pseudogene	Gm18522	ENSMUST00000173947	processed_pseudogene		17	1	37974644	650
ENSMUSG00000110901	lincRNA	Gm48393	ENSMUST00000216969	lincRNA		9	-1	26731174	666
ENSMUSG00000017652	protein_coding	Cd40	ENSMUST00000154443	nonsense_mediated_decay		2	1	165055627	348
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000149345	retained_intron		15	1	81009858	965
ENSMUSG00000092195	transcribed_unprocessed_pseudogene	Vmn2r-ps87	ENSMUST00000236022	processed_transcript		7	1	86859326	2732
ENSMUSG00000019927	protein_coding	Ube2d1	ENSMUST00000144231	retained_intron		10	-1	71285218	3158
ENSMUSG00000110901	lincRNA	Gm48393	ENSMUST00000213570	lincRNA		9	-1	26731861	767
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000134511	retained_intron		15	1	81010635	722
ENSMUSG00000092195	transcribed_unprocessed_pseudogene	Vmn2r-ps87	ENSMUST00000236849	processed_transcript		7	1	86859326	2611
ENSMUSG00000092195	transcribed_unprocessed_pseudogene	Vmn2r-ps87	ENSMUST00000174393	transcribed_unprocessed_pseudogene		7	1	86859326	2629
ENSMUSG00000063380	protein_coding	Olfr945	ENSMUST00000216698	protein_coding	alternative2	9	-1	39276818	1864
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000132039	retained_intron		15	1	81010725	541
ENSMUSG00000113934	processed_pseudogene	Gm48609	ENSMUST00000222278	processed_pseudogene		13	-1	97015299	415
ENSMUSG00000063380	protein_coding	Olfr945	ENSMUST00000076903	protein_coding	principal2	9	-1	39258682	963
ENSMUSG00000025512	protein_coding	Chid1	ENSMUST00000209452	nonsense_mediated_decay		7	-1	141539832	1979
ENSMUSG00000042303	protein_coding	Sgsm3	ENSMUST00000156783	retained_intron		15	1	81010877	492
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000224921	retained_intron		18	1	67854143	3113
ENSMUSG00000092376	processed_pseudogene	Gm19203	ENSMUST00000174049	processed_pseudogene		7	-1	86907934	939
ENSMUSG00000092390	unprocessed_pseudogene	Gm20541	ENSMUST00000173035	unprocessed_pseudogene		17	1	38009647	1406
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000224817	retained_intron		18	1	67857693	680
ENSMUSG00000116321	TEC	Gm49522	ENSMUST00000230595	TEC		15	-1	81115845	813
ENSMUSG00000083072	processed_pseudogene	Gm13668	ENSMUST00000119237	processed_pseudogene		2	-1	73960669	1001
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000225580	retained_intron		18	1	67860345	646
ENSMUSG00000111762	unprocessed_pseudogene	Olfr946-ps1	ENSMUST00000217547	unprocessed_pseudogene		9	-1	39284636	341
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000225681	retained_intron		18	1	67870327	600
ENSMUSG00000025512	protein_coding	Chid1	ENSMUST00000147610	retained_intron		7	-1	141539819	6759
ENSMUSG00000029405	protein_coding	G3bp2	ENSMUST00000113127	protein_coding	alternative1	5	-1	92083719	4182
ENSMUSG00000024542	protein_coding	Cep192	ENSMUST00000225589	retained_intron		18	1	67880378	524
ENSMUSG00000022582	protein_coding	Ly6g	ENSMUST00000190262	protein_coding	principal1	15	1	75155240	941
ENSMUSG00000045752	protein_coding	Tssc4	ENSMUST00000060433	protein_coding	principal1	7	1	143069249	1519
ENSMUSG00000035245	protein_coding	Eogt	ENSMUST00000054344	protein_coding	principal2	6	-1	97149182	4424
ENSMUSG00000025512	protein_coding	Chid1	ENSMUST00000064642	nonsense_mediated_decay		7	-1	141532934	1696
ENSMUSG00000016619	protein_coding	Nup50	ENSMUST00000165443	protein_coding	principal1	15	1	84923411	4766
ENSMUSG00000022582	protein_coding	Ly6g	ENSMUST00000023246	protein_coding		15	1	75156693	336
ENSMUSG00000081724	protein_coding	Olfr129	ENSMUST00000216476	protein_coding	principal1	17	-1	38060079	5275
ENSMUSG00000025512	protein_coding	Chid1	ENSMUST00000155305	processed_transcript		7	-1	141526467	652
ENSMUSG00000025512	protein_coding	Chid1	ENSMUST00000143561	protein_coding		7	-1	141539530	889
ENSMUSG00000081724	protein_coding	Olfr129	ENSMUST00000122318	protein_coding		17	-1	38055591	993
ENSMUSG00000101140	unprocessed_pseudogene	Gm28117	ENSMUST00000188472	unprocessed_pseudogene		15	-1	75197667	371
ENSMUSG00000045752	protein_coding	Tssc4	ENSMUST00000133410	protein_coding		7	1	143069341	1091
ENSMUSG00000016619	protein_coding	Nup50	ENSMUST00000230411	protein_coding	principal1	15	1	84923449	1900
ENSMUSG00000025512	protein_coding	Chid1	ENSMUST00000133359	retained_intron		7	-1	141539832	1127
ENSMUSG00000045752	protein_coding	Tssc4	ENSMUST00000207776	retained_intron		7	1	143069353	1735
ENSMUSG00000094427	unprocessed_pseudogene	Gm15143	ENSMUST00000178180	unprocessed_pseudogene		X	-1	154068139	714
ENSMUSG00000095065	unprocessed_pseudogene	Gm5947	ENSMUST00000179156	unprocessed_pseudogene		X	-1	154082526	714
ENSMUSG00000091962	protein_coding	Vmn2r78	ENSMUST00000233033	protein_coding		7	1	86915094	5346
ENSMUSG00000039714	protein_coding	Cplx3	ENSMUST00000045068	protein_coding	principal1	9	-1	57606281	2859
ENSMUSG00000091962	protein_coding	Vmn2r78	ENSMUST00000233868	retained_intron		7	1	86915094	6054
ENSMUSG00000091962	protein_coding	Vmn2r78	ENSMUST00000232924	retained_intron		7	1	86915094	3660
ENSMUSG00000094592	protein_coding	Samt1d	ENSMUST00000112565	protein_coding	principal1	X	-1	154120685	984
ENSMUSG00000091962	protein_coding	Vmn2r78	ENSMUST00000170835	protein_coding	principal1	7	1	86915094	2952
ENSMUSG00000025512	protein_coding	Chid1	ENSMUST00000166082	protein_coding	principal2	7	-1	141539857	4222
ENSMUSG00000093899	unprocessed_pseudogene	Gm5645	ENSMUST00000179597	unprocessed_pseudogene		X	-1	154133971	714
ENSMUSG00000035245	protein_coding	Eogt	ENSMUST00000135187	processed_transcript		6	-1	97148883	640
ENSMUSG00000025512	protein_coding	Chid1	ENSMUST00000026586	protein_coding		7	-1	141539857	3964
ENSMUSG00000039714	protein_coding	Cplx3	ENSMUST00000217015	protein_coding		9	-1	57605078	540
ENSMUSG00000094118	unprocessed_pseudogene	Gm16445	ENSMUST00000120399	unprocessed_pseudogene		X	-1	154155509	714
ENSMUSG00000110995	processed_pseudogene	Gm18789	ENSMUST00000216115	processed_pseudogene		9	-1	14916021	550
ENSMUSG00000082751	unprocessed_pseudogene	Gm6620	ENSMUST00000120113	unprocessed_pseudogene		X	-1	154186149	715
ENSMUSG00000039714	protein_coding	Cplx3	ENSMUST00000215487	protein_coding		9	-1	57606236	594
ENSMUSG00000038241	protein_coding	Cep250	ENSMUST00000109619	protein_coding	principal4	2	1	155956558	7977
ENSMUSG00000110766	lincRNA	Gm47214	ENSMUST00000217210	lincRNA		9	1	14949463	621
ENSMUSG00000085387	lincRNA	A630050E04Rik	ENSMUST00000151443	lincRNA		2	-1	74102342	581
ENSMUSG00000082462	unprocessed_pseudogene	Gm15147	ENSMUST00000122263	unprocessed_pseudogene		X	-1	154199236	483
ENSMUSG00000035245	protein_coding	Eogt	ENSMUST00000113387	protein_coding	alternative2	6	-1	97148927	701
ENSMUSG00000083978	processed_pseudogene	Gm5060	ENSMUST00000120072	processed_pseudogene		X	-1	154227099	599
ENSMUSG00000035245	protein_coding	Eogt	ENSMUST00000130562	processed_transcript		6	-1	97118754	439
ENSMUSG00000081870	unprocessed_pseudogene	Gm15141	ENSMUST00000121860	unprocessed_pseudogene		X	-1	154239503	729
ENSMUSG00000020250	protein_coding	Txnrd1	ENSMUST00000219368	protein_coding		10	1	82833951	3622
ENSMUSG00000035245	protein_coding	Eogt	ENSMUST00000136575	protein_coding		6	-1	97147784	848
ENSMUSG00000097428	processed_transcript	AW047730	ENSMUST00000181406	processed_transcript		3	1	88200623	2579
ENSMUSG00000035245	protein_coding	Eogt	ENSMUST00000142553	protein_coding		6	-1	97147794	593
ENSMUSG00000045752	protein_coding	Tssc4	ENSMUST00000105920	protein_coding		7	1	143069368	895
ENSMUSG00000035245	protein_coding	Eogt	ENSMUST00000204331	protein_coding		6	-1	97148860	501
ENSMUSG00000097428	processed_transcript	AW047730	ENSMUST00000180555	processed_transcript		3	1	88200635	984
ENSMUSG00000026827	protein_coding	Gpd2	ENSMUST00000112618	protein_coding		2	1	57238297	5759
ENSMUSG00000035245	protein_coding	Eogt	ENSMUST00000142116	protein_coding		6	-1	97148924	509
ENSMUSG00000097280	lincRNA	AI849053	ENSMUST00000181021	lincRNA		3	-1	88204595	2658
ENSMUSG00000026827	protein_coding	Gpd2	ENSMUST00000148991	processed_transcript		2	1	57244362	620
ENSMUSG00000034009	protein_coding	Rxfp1	ENSMUST00000078527	protein_coding	principal1	3	-1	79737794	5382
ENSMUSG00000059663	protein_coding	Samt2b	ENSMUST00000082357	protein_coding	principal1	X	-1	154343392	919
ENSMUSG00000026827	protein_coding	Gpd2	ENSMUST00000124689	processed_transcript		2	1	57265135	220
ENSMUSG00000026827	protein_coding	Gpd2	ENSMUST00000154612	processed_transcript		2	1	57267377	392
ENSMUSG00000081502	unprocessed_pseudogene	Gm5646	ENSMUST00000120568	unprocessed_pseudogene		X	1	154399578	714
ENSMUSG00000045752	protein_coding	Tssc4	ENSMUST00000147995	protein_coding		7	1	143069424	766
ENSMUSG00000026827	protein_coding	Gpd2	ENSMUST00000028167	protein_coding	principal1	2	1	57238382	5620
ENSMUSG00000082584	processed_pseudogene	Gm8569	ENSMUST00000117630	processed_pseudogene		X	1	154436056	647
ENSMUSG00000005779	protein_coding	Psmb4	ENSMUST00000005923	protein_coding	principal1	3	-1	94886961	1183
ENSMUSG00000045752	protein_coding	Tssc4	ENSMUST00000137856	protein_coding		7	1	143069544	981
ENSMUSG00000026827	protein_coding	Gpd2	ENSMUST00000169687	protein_coding	principal1	2	1	57237678	5745
ENSMUSG00000005779	protein_coding	Psmb4	ENSMUST00000134133	retained_intron		3	-1	94884843	292
ENSMUSG00000095834	processed_pseudogene	Tdgf1-ps1	ENSMUST00000179882	processed_pseudogene		16	1	3730510	513
ENSMUSG00000038241	protein_coding	Cep250	ENSMUST00000151569	protein_coding		2	1	155956572	2310
ENSMUSG00000045752	protein_coding	Tssc4	ENSMUST00000208779	protein_coding		7	1	143069767	647
ENSMUSG00000038241	protein_coding	Cep250	ENSMUST00000109618	protein_coding	alternative2	2	1	155956594	1254
ENSMUSG00000025051	protein_coding	Samt4	ENSMUST00000026029	protein_coding	principal1	X	1	154482002	963
ENSMUSG00000045752	protein_coding	Tssc4	ENSMUST00000177841	protein_coding	principal1	7	1	143069368	1364
ENSMUSG00000026018	protein_coding	Ica1l	ENSMUST00000027172	protein_coding	principal2	1	-1	60043087	3650
ENSMUSG00000005779	protein_coding	Psmb4	ENSMUST00000133412	retained_intron		3	-1	94886862	666
ENSMUSG00000020250	protein_coding	Txnrd1	ENSMUST00000020484	protein_coding	principal1	10	1	82859179	3325
ENSMUSG00000038241	protein_coding	Cep250	ENSMUST00000148191	retained_intron		2	1	155976389	6361
ENSMUSG00000005779	protein_coding	Psmb4	ENSMUST00000136143	retained_intron		3	-1	94886745	651
ENSMUSG00000038241	protein_coding	Cep250	ENSMUST00000155160	retained_intron		2	1	155979558	352
ENSMUSG00000005779	protein_coding	Psmb4	ENSMUST00000200513	retained_intron		3	-1	94885955	649
ENSMUSG00000029405	protein_coding	G3bp2	ENSMUST00000164378	protein_coding	principal3	5	-1	92083238	3026
ENSMUSG00000027510	protein_coding	Rbm38	ENSMUST00000173393	protein_coding	principal1	2	1	173020498	2071
ENSMUSG00000026018	protein_coding	Ica1l	ENSMUST00000191251	protein_coding	principal2	1	-1	60043122	3415
ENSMUSG00000038241	protein_coding	Cep250	ENSMUST00000156355	protein_coding		2	1	155985883	672
ENSMUSG00000038241	protein_coding	Cep250	ENSMUST00000128683	nonsense_mediated_decay		2	1	155985915	872
ENSMUSG00000054181	processed_transcript	A930012O16Rik	ENSMUST00000156418	processed_transcript		2	-1	57238508	1541
ENSMUSG00000026018	protein_coding	Ica1l	ENSMUST00000189776	protein_coding	alternative2	1	-1	60028229	1320
ENSMUSG00000026888	protein_coding	Grb14	ENSMUST00000028252	protein_coding	principal1	2	-1	65022782	1986
ENSMUSG00000020250	protein_coding	Txnrd1	ENSMUST00000219962	protein_coding	principal1	10	1	82859207	2297
ENSMUSG00000054181	processed_transcript	A930012O16Rik	ENSMUST00000146529	processed_transcript		2	-1	57238508	1498
ENSMUSG00000029405	protein_coding	G3bp2	ENSMUST00000169094	protein_coding	principal3	5	-1	92083513	2716
ENSMUSG00000072888	protein_coding	Samt2	ENSMUST00000101137	protein_coding	principal1	X	-1	154579360	923
ENSMUSG00000026018	protein_coding	Ica1l	ENSMUST00000187364	retained_intron		1	-1	60022615	619
ENSMUSG00000026888	protein_coding	Grb14	ENSMUST00000137085	processed_transcript		2	-1	64934442	2797
ENSMUSG00000026888	protein_coding	Grb14	ENSMUST00000156765	protein_coding		2	-1	64975769	813
ENSMUSG00000020250	protein_coding	Txnrd1	ENSMUST00000218082	retained_intron		10	1	82859244	483
ENSMUSG00000026018	protein_coding	Ica1l	ENSMUST00000186970	processed_transcript		1	-1	60043184	951
ENSMUSG00000084367	unprocessed_pseudogene	Gm15142	ENSMUST00000121013	unprocessed_pseudogene		X	1	154635551	856
ENSMUSG00000037062	protein_coding	Sh3glb1	ENSMUST00000199531	protein_coding		3	-1	144720110	2584
ENSMUSG00000029405	protein_coding	G3bp2	ENSMUST00000202258	protein_coding	principal3	5	-1	92083658	1884
ENSMUSG00000034009	protein_coding	Rxfp1	ENSMUST00000182491	nonsense_mediated_decay		3	-1	79737880	4983
ENSMUSG00000020250	protein_coding	Txnrd1	ENSMUST00000218694	protein_coding		10	1	82859259	581
ENSMUSG00000034009	protein_coding	Rxfp1	ENSMUST00000183199	retained_intron		3	-1	79653511	1883
ENSMUSG00000020250	protein_coding	Txnrd1	ENSMUST00000219442	protein_coding	principal1	10	1	82860301	3531
ENSMUSG00000034009	protein_coding	Rxfp1	ENSMUST00000183040	processed_transcript		3	-1	79667853	1388
ENSMUSG00000031278	protein_coding	Acsl4	ENSMUST00000112904	protein_coding	alternative1	X	-1	142390504	4959
ENSMUSG00000037062	protein_coding	Sh3glb1	ENSMUST00000199350	protein_coding		3	-1	144697467	665
ENSMUSG00000026888	protein_coding	Grb14	ENSMUST00000145603	processed_transcript		2	-1	64975746	2547
ENSMUSG00000026888	protein_coding	Grb14	ENSMUST00000146807	processed_transcript		2	-1	65024987	380
ENSMUSG00000022314	protein_coding	Rad21	ENSMUST00000022927	protein_coding	principal1	15	-1	51991747	3956
ENSMUSG00000038241	protein_coding	Cep250	ENSMUST00000094421	protein_coding	alternative2	2	1	155956558	7919
ENSMUSG00000027510	protein_coding	Rbm38	ENSMUST00000173878	nonsense_mediated_decay		2	1	173021899	936
ENSMUSG00000113264	processed_pseudogene	Gm19095	ENSMUST00000220533	processed_pseudogene		13	1	75199214	730
ENSMUSG00000029405	protein_coding	G3bp2	ENSMUST00000202352	processed_transcript		5	-1	92067532	597
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000133353	nonsense_mediated_decay		8	-1	109606232	3807
ENSMUSG00000037062	protein_coding	Sh3glb1	ENSMUST00000198254	protein_coding	alternative1	3	-1	144720323	5945
ENSMUSG00000038241	protein_coding	Cep250	ENSMUST00000039994	protein_coding	alternative2	2	1	155956558	7979
ENSMUSG00000022314	protein_coding	Rad21	ENSMUST00000226529	protein_coding		15	-1	51991510	788
ENSMUSG00000113821	processed_pseudogene	Gm48234	ENSMUST00000221326	processed_pseudogene		13	-1	75479387	193
ENSMUSG00000029405	protein_coding	G3bp2	ENSMUST00000201824	retained_intron		5	-1	92067523	697
ENSMUSG00000020250	protein_coding	Txnrd1	ENSMUST00000219911	retained_intron		10	1	82860505	3449
ENSMUSG00000029405	protein_coding	G3bp2	ENSMUST00000202123	protein_coding		5	-1	92073520	665
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000125222	processed_transcript		8	-1	109594051	305
ENSMUSG00000110721	lincRNA	Gm47231	ENSMUST00000217329	lincRNA		9	-1	44598018	993
ENSMUSG00000020250	protein_coding	Txnrd1	ENSMUST00000218724	retained_intron		10	1	82886846	894
ENSMUSG00000027510	protein_coding	Rbm38	ENSMUST00000155512	retained_intron		2	1	173021913	2281
ENSMUSG00000029405	protein_coding	G3bp2	ENSMUST00000201820	protein_coding		5	-1	92083263	595
ENSMUSG00000031278	protein_coding	Acsl4	ENSMUST00000112903	protein_coding	alternative1	X	-1	142390504	4956
ENSMUSG00000027510	protein_coding	Rbm38	ENSMUST00000173720	nonsense_mediated_decay		2	1	173022111	620
ENSMUSG00000109864	protein_coding	Eid3	ENSMUST00000211623	protein_coding	principal1	10	1	82866626	1305
ENSMUSG00000029405	protein_coding	G3bp2	ENSMUST00000202125	retained_intron		5	-1	92083717	3572
ENSMUSG00000039810	protein_coding	Zc3h10	ENSMUST00000040572	protein_coding	principal1	10	-1	128547774	3721
ENSMUSG00000027510	protein_coding	Rbm38	ENSMUST00000173997	protein_coding		2	1	173022438	440
ENSMUSG00000079111	protein_coding	Kdelr2	ENSMUST00000110731	protein_coding	principal1	5	1	143403838	1829
ENSMUSG00000027510	protein_coding	Rbm38	ENSMUST00000173979	protein_coding		2	1	173022831	758
ENSMUSG00000039810	protein_coding	Zc3h10	ENSMUST00000135226	processed_transcript		10	-1	128547743	757
ENSMUSG00000037062	protein_coding	Sh3glb1	ENSMUST00000163279	protein_coding	principal3	3	-1	144720335	3961
ENSMUSG00000031278	protein_coding	Acsl4	ENSMUST00000033634	protein_coding	principal3	X	-1	142390535	5280
ENSMUSG00000027510	protein_coding	Rbm38	ENSMUST00000130430	retained_intron		2	1	173023050	1527
ENSMUSG00000105206	processed_pseudogene	Gm4870	ENSMUST00000198525	processed_pseudogene		5	1	143438393	1251
ENSMUSG00000039810	protein_coding	Zc3h10	ENSMUST00000152539	protein_coding		10	-1	128547639	992
ENSMUSG00000031278	protein_coding	Acsl4	ENSMUST00000140520	processed_transcript		X	-1	142328025	291
ENSMUSG00000002020	protein_coding	Ltbp2	ENSMUST00000002073	protein_coding	alternative2	12	-1	84876532	6769
ENSMUSG00000106068	processed_pseudogene	Gm9497	ENSMUST00000199908	processed_pseudogene		5	1	143456903	538
ENSMUSG00000075221	protein_coding	Olfr992	ENSMUST00000214895	protein_coding	principal1	2	-1	85409440	2222
ENSMUSG00000000759	protein_coding	Tubgcp3	ENSMUST00000164774	nonsense_mediated_decay		8	-1	12672099	3515
ENSMUSG00000029405	protein_coding	G3bp2	ENSMUST00000167918	protein_coding	alternative1	5	-1	92083557	4232
ENSMUSG00000082929	processed_pseudogene	Gm6067	ENSMUST00000121648	processed_pseudogene		X	-1	142406441	491
ENSMUSG00000102791	TEC	Gm37709	ENSMUST00000195074	TEC		16	1	79651527	600
ENSMUSG00000075221	protein_coding	Olfr992	ENSMUST00000213749	protein_coding	principal1	2	-1	85409469	2150
ENSMUSG00000027510	protein_coding	Rbm38	ENSMUST00000029014	protein_coding	principal1	2	1	173021902	1768
ENSMUSG00000037062	protein_coding	Sh3glb1	ENSMUST00000199854	protein_coding		3	-1	144720205	1416
ENSMUSG00000041040	protein_coding	Fam117b	ENSMUST00000036540	protein_coding	principal1	1	1	59913006	5532
ENSMUSG00000039810	protein_coding	Zc3h10	ENSMUST00000133458	protein_coding		10	-1	128547725	565
ENSMUSG00000002020	protein_coding	Ltbp2	ENSMUST00000163189	protein_coding	alternative2	12	-1	84876479	6470
ENSMUSG00000067144	protein_coding	Slc22a7	ENSMUST00000087012	protein_coding	principal2	17	-1	46438457	1989
ENSMUSG00000100548	antisense	Gm29585	ENSMUST00000187855	antisense		10	1	128522263	425
ENSMUSG00000037062	protein_coding	Sh3glb1	ENSMUST00000200532	protein_coding		3	-1	144706633	582
ENSMUSG00000097552	processed_pseudogene	Rps19-ps12	ENSMUST00000181937	processed_pseudogene		16	-1	79914871	412
ENSMUSG00000100548	antisense	Gm29585	ENSMUST00000185270	antisense		10	1	128524571	514
ENSMUSG00000087442	antisense	Gm14453	ENSMUST00000139677	antisense		2	-1	173034580	553
ENSMUSG00000101810	lincRNA	1700066C05Rik	ENSMUST00000191029	lincRNA		16	1	79999376	407
ENSMUSG00000024672	protein_coding	Ms4a7	ENSMUST00000025574	protein_coding	alternative2	19	-1	11334695	1576
ENSMUSG00000075221	protein_coding	Olfr992	ENSMUST00000215617	protein_coding		2	-1	85409441	476
ENSMUSG00000092596	processed_transcript	Gm20490	ENSMUST00000173622	processed_transcript		2	-1	173022956	198
ENSMUSG00000002020	protein_coding	Ltbp2	ENSMUST00000166383	protein_coding		12	-1	84791843	614
ENSMUSG00000075221	protein_coding	Olfr992	ENSMUST00000099927	protein_coding	principal1	2	-1	85400531	930
ENSMUSG00000100548	antisense	Gm29585	ENSMUST00000188089	antisense		10	1	128525328	835
ENSMUSG00000097633	antisense	Gm16617	ENSMUST00000181008	antisense		14	-1	51988827	675
ENSMUSG00000067144	protein_coding	Slc22a7	ENSMUST00000233715	protein_coding	alternative2	17	-1	46437629	1410
ENSMUSG00000002020	protein_coding	Ltbp2	ENSMUST00000163214	protein_coding		12	-1	84792971	922
ENSMUSG00000116151	processed_pseudogene	Gm49535	ENSMUST00000229220	processed_pseudogene		16	-1	8103788	415
ENSMUSG00000041040	protein_coding	Fam117b	ENSMUST00000151630	nonsense_mediated_decay		1	1	59970680	418
ENSMUSG00000116918	processed_pseudogene	Gm49578	ENSMUST00000231460	processed_pseudogene		16	1	80710944	548
ENSMUSG00000002020	protein_coding	Ltbp2	ENSMUST00000165141	protein_coding		12	-1	84799463	547
ENSMUSG00000041040	protein_coding	Fam117b	ENSMUST00000189790	retained_intron		1	1	59979181	1758
ENSMUSG00000067144	protein_coding	Slc22a7	ENSMUST00000233575	protein_coding		17	-1	46438394	512
ENSMUSG00000103696	TEC	Gm37531	ENSMUST00000191628	TEC		1	1	59929688	5415
ENSMUSG00000082125	processed_pseudogene	Gm14679	ENSMUST00000121536	processed_pseudogene		X	1	62372093	722
ENSMUSG00000009246	protein_coding	Trpm5	ENSMUST00000148715	protein_coding		7	-1	143074561	726
ENSMUSG00000036046	protein_coding	5031439G07Rik	ENSMUST00000047144	protein_coding	principal1	15	-1	84988000	6845
ENSMUSG00000021600	lincRNA	8030423J24Rik	ENSMUST00000225672	lincRNA		13	1	70882948	869
ENSMUSG00000040441	protein_coding	Slc26a10	ENSMUST00000221174	retained_intron		10	-1	127180582	3600
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182649	nonsense_mediated_decay		14	1	51984719	751
ENSMUSG00000068246	protein_coding	Apol9b	ENSMUST00000230979	protein_coding	principal1	15	1	77729039	1529
ENSMUSG00000002020	protein_coding	Ltbp2	ENSMUST00000168699	retained_intron		12	-1	84876491	4015
ENSMUSG00000009246	protein_coding	Trpm5	ENSMUST00000136602	protein_coding		7	-1	143074037	622
ENSMUSG00000030335	protein_coding	Mrpl51	ENSMUST00000136804	processed_transcript		6	1	125191801	855
ENSMUSG00000002020	protein_coding	Ltbp2	ENSMUST00000110254	protein_coding	principal2	12	-1	84876495	6602
ENSMUSG00000030825	protein_coding	Hsd17b14	ENSMUST00000107752	protein_coding	principal1	7	1	45554893	1400
ENSMUSG00000036046	protein_coding	5031439G07Rik	ENSMUST00000124308	retained_intron		15	-1	84960983	5106
ENSMUSG00000031253	protein_coding	Srpx2	ENSMUST00000033606	protein_coding	principal1	X	1	133908426	2290
ENSMUSG00000092130	antisense	D030025P21Rik	ENSMUST00000220643	antisense		12	1	84875769	3987
ENSMUSG00000036046	protein_coding	5031439G07Rik	ENSMUST00000170863	processed_transcript		15	-1	84988551	353
ENSMUSG00000092130	antisense	D030025P21Rik	ENSMUST00000171853	antisense		12	1	84875769	2364
ENSMUSG00000068246	protein_coding	Apol9b	ENSMUST00000109775	protein_coding	principal1	15	1	77729094	1573
ENSMUSG00000030825	protein_coding	Hsd17b14	ENSMUST00000210300	protein_coding		7	1	45554937	797
ENSMUSG00000031387	protein_coding	Renbp	ENSMUST00000114379	protein_coding		X	-1	73930792	1318
ENSMUSG00000036046	protein_coding	5031439G07Rik	ENSMUST00000165743	protein_coding		15	-1	84987971	5032
ENSMUSG00000030335	protein_coding	Mrpl51	ENSMUST00000032485	protein_coding	principal1	6	1	125192165	3427
ENSMUSG00000001155	protein_coding	Ftcd	ENSMUST00000001183	protein_coding	principal1	10	1	76575648	1933
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000123605	protein_coding	principal1	8	-1	109608623	2039
ENSMUSG00000068246	protein_coding	Apol9b	ENSMUST00000230742	protein_coding		15	1	77729148	855
ENSMUSG00000030335	protein_coding	Mrpl51	ENSMUST00000144380	retained_intron		6	1	125192217	580
ENSMUSG00000022715	protein_coding	Tmem114	ENSMUST00000023400	protein_coding	principal1	16	-1	8425136	1407
ENSMUSG00000068246	protein_coding	Apol9b	ENSMUST00000230377	protein_coding		15	1	77733604	615
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000143900	protein_coding		8	-1	109608623	1455
ENSMUSG00000106444	processed_pseudogene	Gm18748	ENSMUST00000198507	processed_pseudogene		16	-1	19168046	622
ENSMUSG00000107288	lincRNA	Gm42903	ENSMUST00000202607	lincRNA		5	1	115349130	481
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000142106	retained_intron		8	-1	109596282	912
ENSMUSG00000112978	processed_pseudogene	Gm18601	ENSMUST00000220831	processed_pseudogene		13	1	100392732	634
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000124138	retained_intron		8	-1	109594950	490
ENSMUSG00000101431	processed_pseudogene	Gm7901	ENSMUST00000120430	processed_pseudogene		8	-1	75713196	1597
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000125779	retained_intron		8	-1	109601511	791
ENSMUSG00000031253	protein_coding	Srpx2	ENSMUST00000113304	protein_coding	principal1	X	1	133908448	2848
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000150804	nonsense_mediated_decay		8	-1	109608366	857
ENSMUSG00000086352	lincRNA	4930401G09Rik	ENSMUST00000139500	lincRNA		5	-1	115360123	637
ENSMUSG00000026531	protein_coding	Mptx1	ENSMUST00000027816	protein_coding	principal1	1	1	174330518	799
ENSMUSG00000009246	protein_coding	Trpm5	ENSMUST00000126776	retained_intron		7	-1	143074853	1925
ENSMUSG00000001155	protein_coding	Ftcd	ENSMUST00000137347	retained_intron		10	1	76575652	2914
ENSMUSG00000031214	protein_coding	Ophn1	ENSMUST00000033560	protein_coding	principal1	X	-1	98890985	7170
ENSMUSG00000001155	protein_coding	Ftcd	ENSMUST00000146344	processed_transcript		10	1	76587133	464
ENSMUSG00000031214	protein_coding	Ophn1	ENSMUST00000142267	protein_coding		X	-1	98890985	1011
ENSMUSG00000032303	protein_coding	Chrna3	ENSMUST00000034851	protein_coding	alternative2	9	-1	55026562	4358
ENSMUSG00000031214	protein_coding	Ophn1	ENSMUST00000156634	retained_intron		X	-1	98890625	2720
ENSMUSG00000024672	protein_coding	Ms4a7	ENSMUST00000067532	protein_coding	principal3	19	-1	11336144	1334
ENSMUSG00000087292	lincRNA	Gm13832	ENSMUST00000146546	lincRNA		5	1	115359078	414
ENSMUSG00000111656	lincRNA	Gm47232	ENSMUST00000216193	lincRNA		9	-1	44599720	866
ENSMUSG00000102303	TEC	Gm38191	ENSMUST00000194509	TEC		13	-1	71071726	770
ENSMUSG00000032303	protein_coding	Chrna3	ENSMUST00000214204	protein_coding		9	-1	55026530	2414
ENSMUSG00000082197	processed_pseudogene	Gm8577	ENSMUST00000122420	processed_pseudogene		X	1	154774453	986
ENSMUSG00000031214	protein_coding	Ophn1	ENSMUST00000113826	protein_coding	principal1	X	-1	98890781	2794
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000146064	retained_intron		8	-1	109608420	670
ENSMUSG00000040441	protein_coding	Slc26a10	ENSMUST00000222911	protein_coding	alternative2	10	-1	127180645	3130
ENSMUSG00000087292	lincRNA	Gm13832	ENSMUST00000151159	lincRNA		5	1	115359097	370
ENSMUSG00000113358	lincRNA	1700112M02Rik	ENSMUST00000221719	lincRNA		13	1	71487607	348
ENSMUSG00000034437	processed_pseudogene	Gm9761	ENSMUST00000075650	processed_pseudogene		3	-1	116561426	492
ENSMUSG00000040441	protein_coding	Slc26a10	ENSMUST00000238577	retained_intron		10	-1	127175113	1771
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000131107	retained_intron		8	-1	109608420	2454
ENSMUSG00000106887	TEC	A930005G22Rik	ENSMUST00000201293	TEC		5	-1	115422500	1904
ENSMUSG00000113305	processed_pseudogene	Gm47811	ENSMUST00000220461	processed_pseudogene		13	-1	71624974	365
ENSMUSG00000040441	protein_coding	Slc26a10	ENSMUST00000218658	retained_intron		10	-1	127176989	492
ENSMUSG00000031387	protein_coding	Renbp	ENSMUST00000116578	protein_coding	principal2	X	-1	73930850	1418
ENSMUSG00000113034	processed_pseudogene	Gm47812	ENSMUST00000221533	processed_pseudogene		13	1	71625028	116
ENSMUSG00000031730	protein_coding	Dhodh	ENSMUST00000128350	protein_coding		8	-1	109608673	547
ENSMUSG00000032303	protein_coding	Chrna3	ENSMUST00000238862	protein_coding	principal2	9	-1	55026559	3123
ENSMUSG00000040441	protein_coding	Slc26a10	ENSMUST00000220327	retained_intron		10	-1	127176851	488
ENSMUSG00000109409	processed_pseudogene	Gm9343	ENSMUST00000209016	processed_pseudogene		7	-1	50943154	2609
ENSMUSG00000106039	IG_C_gene	Iglc4	ENSMUST00000197046	IG_C_gene	principal1	16	-1	19195312	314
ENSMUSG00000072100	protein_coding	Cldn34b1	ENSMUST00000096852	protein_coding	principal1	X	-1	154890267	1079
ENSMUSG00000108958	processed_pseudogene	Gm21032	ENSMUST00000208108	processed_pseudogene		7	-1	50951871	2578
ENSMUSG00000024672	protein_coding	Ms4a7	ENSMUST00000056035	protein_coding		19	-1	11336116	882
ENSMUSG00000040441	protein_coding	Slc26a10	ENSMUST00000095270	protein_coding	principal2	10	-1	127180645	2215
ENSMUSG00000066672	protein_coding	Olfr417	ENSMUST00000217962	protein_coding	principal1	1	1	174365122	5662
ENSMUSG00000105066	IG_J_gene	Iglj4	ENSMUST00000198313	IG_J_gene	principal1	16	-1	19196536	42
ENSMUSG00000109494	processed_pseudogene	Gm21033	ENSMUST00000208590	processed_pseudogene		7	-1	50960649	2608
ENSMUSG00000066672	protein_coding	Olfr417	ENSMUST00000220394	protein_coding	principal1	1	1	174365122	6080
ENSMUSG00000030825	protein_coding	Hsd17b14	ENSMUST00000210997	nonsense_mediated_decay		7	1	45556044	1315
ENSMUSG00000031387	protein_coding	Renbp	ENSMUST00000135213	retained_intron		X	-1	73926401	416
ENSMUSG00000107995	processed_pseudogene	Gm44487	ENSMUST00000205145	processed_pseudogene		6	-1	125208691	325
ENSMUSG00000031214	protein_coding	Ophn1	ENSMUST00000125150	retained_intron		X	-1	98891025	3400
ENSMUSG00000024672	protein_coding	Ms4a7	ENSMUST00000159269	protein_coding		19	-1	11324628	501
ENSMUSG00000066672	protein_coding	Olfr417	ENSMUST00000085862	protein_coding	principal1	1	1	174368919	930
ENSMUSG00000052075	protein_coding	1700029F12Rik	ENSMUST00000222360	lincRNA		13	-1	97034349	1109
ENSMUSG00000030825	protein_coding	Hsd17b14	ENSMUST00000211029	retained_intron		7	1	45559206	427
ENSMUSG00000052075	protein_coding	1700029F12Rik	ENSMUST00000221277	lincRNA		13	-1	97034333	840
ENSMUSG00000030825	protein_coding	Hsd17b14	ENSMUST00000209566	processed_transcript		7	1	45562096	280
ENSMUSG00000031214	protein_coding	Ophn1	ENSMUST00000147805	retained_intron		X	-1	98890985	3006
ENSMUSG00000024672	protein_coding	Ms4a7	ENSMUST00000162785	retained_intron		19	-1	11336146	3607
ENSMUSG00000114038	processed_transcript	Gm40999	ENSMUST00000222586	lincRNA		13	-1	71956552	3387
ENSMUSG00000031214	protein_coding	Ophn1	ENSMUST00000156917	retained_intron		X	-1	98890609	1782
ENSMUSG00000030825	protein_coding	Hsd17b14	ENSMUST00000209745	processed_transcript		7	1	45562107	410
ENSMUSG00000114038	processed_transcript	Gm40999	ENSMUST00000223183	retained_intron		13	-1	71785895	2517
ENSMUSG00000063728	protein_coding	Magea6	ENSMUST00000112562	protein_coding	principal1	X	-1	154935987	1212
ENSMUSG00000104975	IG_J_gene	Iglj2	ENSMUST00000197969	IG_J_gene	principal1	16	-1	19200235	38
ENSMUSG00000031214	protein_coding	Ophn1	ENSMUST00000140598	processed_transcript		X	-1	98890384	474
ENSMUSG00000063728	protein_coding	Magea6	ENSMUST00000076986	protein_coding	principal1	X	-1	154926115	1201
ENSMUSG00000109476	processed_pseudogene	Gm21034	ENSMUST00000207390	processed_pseudogene		7	-1	50969403	2608
ENSMUSG00000076937	IG_C_gene	Iglc2	ENSMUST00000198182	IG_C_gene	principal5	16	-1	19198853	458
ENSMUSG00000030825	protein_coding	Hsd17b14	ENSMUST00000209551	processed_transcript		7	1	45563070	235
ENSMUSG00000031214	protein_coding	Ophn1	ENSMUST00000147529	protein_coding		X	-1	98578489	556
ENSMUSG00000052075	protein_coding	1700029F12Rik	ENSMUST00000091377	protein_coding	principal1	13	-1	97034362	1128
ENSMUSG00000109172	processed_pseudogene	Gm21035	ENSMUST00000207867	processed_pseudogene		7	-1	50978154	2608
ENSMUSG00000040287	protein_coding	Stac3	ENSMUST00000160019	protein_coding	principal1	10	1	127501686	1581
ENSMUSG00000031214	protein_coding	Ophn1	ENSMUST00000154920	processed_transcript		X	-1	98578435	330
ENSMUSG00000076937	IG_C_gene	Iglc2	ENSMUST00000103749	protein_coding	alternative2	16	-1	19200351	606
ENSMUSG00000109173	processed_pseudogene	Gm21036	ENSMUST00000207544	processed_pseudogene		7	-1	50986908	2611
ENSMUSG00000094196	protein_coding	Magea3	ENSMUST00000079867	protein_coding	principal1	X	-1	154949505	963
ENSMUSG00000109202	processed_pseudogene	Gm21037	ENSMUST00000209086	processed_pseudogene		7	-1	51155424	2608
ENSMUSG00000099502	lincRNA	Gm28640	ENSMUST00000190918	lincRNA		2	1	74130181	550
ENSMUSG00000093740	unprocessed_pseudogene	Gm18417	ENSMUST00000176564	unprocessed_pseudogene		17	-1	55851129	648
ENSMUSG00000031387	protein_coding	Renbp	ENSMUST00000135711	retained_intron		X	-1	73930817	2125
ENSMUSG00000103517	lincRNA	Gm37432	ENSMUST00000195294	lincRNA		1	-1	191493905	341
ENSMUSG00000117045	processed_pseudogene	Gm18365	ENSMUST00000233119	processed_pseudogene		17	-1	55768471	586
ENSMUSG00000040287	protein_coding	Stac3	ENSMUST00000160610	protein_coding		10	1	127501694	373
ENSMUSG00000031387	protein_coding	Renbp	ENSMUST00000155597	protein_coding	alternative2	X	-1	73930756	1310
ENSMUSG00000083554	processed_pseudogene	Gm6645	ENSMUST00000118505	processed_pseudogene		X	-1	154974721	2726
ENSMUSG00000031387	protein_coding	Renbp	ENSMUST00000144771	processed_transcript		X	-1	73929129	548
ENSMUSG00000108963	processed_pseudogene	Gm16478	ENSMUST00000208113	processed_pseudogene		7	1	51170517	5084
ENSMUSG00000116343	processed_pseudogene	Gm6847	ENSMUST00000230622	processed_pseudogene		15	1	85008139	862
ENSMUSG00000109443	processed_pseudogene	Gm45002	ENSMUST00000208045	processed_pseudogene		7	1	51394829	120
ENSMUSG00000040287	protein_coding	Stac3	ENSMUST00000035839	protein_coding	principal1	10	1	127501717	1790
ENSMUSG00000109059	processed_pseudogene	Gm9354	ENSMUST00000209075	processed_pseudogene		7	1	51458060	468
ENSMUSG00000000759	protein_coding	Tubgcp3	ENSMUST00000000776	protein_coding	principal1	8	-1	12672248	3797
ENSMUSG00000031387	protein_coding	Renbp	ENSMUST00000149130	retained_intron		X	-1	73928080	349
ENSMUSG00000056271	protein_coding	Lman1l	ENSMUST00000093832	protein_coding	principal1	9	-1	57620774	1685
ENSMUSG00000009246	protein_coding	Trpm5	ENSMUST00000150589	retained_intron		7	-1	143087214	3997
ENSMUSG00000040287	protein_coding	Stac3	ENSMUST00000160760	retained_intron		10	1	127504491	560
ENSMUSG00000056271	protein_coding	Lman1l	ENSMUST00000044937	nonsense_mediated_decay		9	-1	57620774	1489
ENSMUSG00000040287	protein_coding	Stac3	ENSMUST00000162302	retained_intron		10	1	127507225	600
ENSMUSG00000079350	protein_coding	Magea8	ENSMUST00000070141	protein_coding	principal1	X	-1	154995850	1646
ENSMUSG00000000759	protein_coding	Tubgcp3	ENSMUST00000168657	retained_intron		8	-1	12637982	2018
ENSMUSG00000038388	protein_coding	Mpp6	ENSMUST00000166318	protein_coding	alternative1	6	1	50110241	2222
ENSMUSG00000116559	processed_pseudogene	Gm19867	ENSMUST00000231837	processed_pseudogene		16	1	80726666	485
ENSMUSG00000031387	protein_coding	Renbp	ENSMUST00000146371	retained_intron		X	-1	73930741	1407
ENSMUSG00000116566	processed_pseudogene	Fkbp1a-ps3	ENSMUST00000232298	processed_pseudogene		16	1	80949649	318
ENSMUSG00000106746	TEC	2900064F13Rik	ENSMUST00000202166	TEC		5	1	81826816	1008
ENSMUSG00000000759	protein_coding	Tubgcp3	ENSMUST00000164611	retained_intron		8	-1	12637955	1178
ENSMUSG00000031387	protein_coding	Renbp	ENSMUST00000165359	nonsense_mediated_decay		X	-1	73930745	514
ENSMUSG00000115150	TEC	Gm10370	ENSMUST00000226930	TEC		15	1	55930702	1714
ENSMUSG00000106860	TEC	1700008H02Rik	ENSMUST00000201220	TEC		5	-1	82121362	1684
ENSMUSG00000115200	lincRNA	Gm46516	ENSMUST00000227739	lincRNA		15	1	55923402	3245
ENSMUSG00000031387	protein_coding	Renbp	ENSMUST00000150241	retained_intron		X	-1	73930752	490
ENSMUSG00000096644	protein_coding	Magea1	ENSMUST00000078193	protein_coding	principal1	X	-1	155089793	1108
ENSMUSG00000087382	antisense	Ctcflos	ENSMUST00000144256	antisense		2	1	173110818	1237
ENSMUSG00000038388	protein_coding	Mpp6	ENSMUST00000036236	protein_coding	principal3	6	1	50110249	2161
ENSMUSG00000060969	protein_coding	Irx1	ENSMUST00000077337	protein_coding	principal1	13	-1	71963723	2373
ENSMUSG00000087382	antisense	Ctcflos	ENSMUST00000142165	antisense		2	1	173119738	469
ENSMUSG00000055746	protein_coding	Magea2	ENSMUST00000112559	protein_coding	principal1	X	-1	155032500	1302
ENSMUSG00000038388	protein_coding	Mpp6	ENSMUST00000204545	protein_coding	principal3	6	1	50110278	2418
ENSMUSG00000058444	protein_coding	Map2k5	ENSMUST00000034920	protein_coding	principal1	9	-1	63377902	2310
ENSMUSG00000060969	protein_coding	Irx1	ENSMUST00000223379	protein_coding		13	-1	71959433	498
ENSMUSG00000000759	protein_coding	Tubgcp3	ENSMUST00000164971	retained_intron		8	-1	12657620	2977
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000024031	protein_coding	principal1	9	-1	106438319	1529
ENSMUSG00000038388	protein_coding	Mpp6	ENSMUST00000203415	retained_intron		6	1	50110280	3523
ENSMUSG00000060969	protein_coding	Irx1	ENSMUST00000223460	protein_coding		13	-1	71960716	820
ENSMUSG00000055746	protein_coding	Magea2	ENSMUST00000178950	protein_coding	principal1	X	-1	155093666	1299
ENSMUSG00000028795	protein_coding	Ccdc28b	ENSMUST00000126777	processed_transcript		4	-1	129620592	309
ENSMUSG00000087382	antisense	Ctcflos	ENSMUST00000142207	antisense		2	1	173110835	918
ENSMUSG00000058444	protein_coding	Map2k5	ENSMUST00000213604	retained_intron		9	-1	63303143	1294
ENSMUSG00000057068	protein_coding	Fam47e	ENSMUST00000146417	protein_coding	principal1	5	1	92555069	1357
ENSMUSG00000055746	protein_coding	Magea2	ENSMUST00000069477	protein_coding	principal1	X	-1	155033292	1685
ENSMUSG00000087382	antisense	Ctcflos	ENSMUST00000153523	antisense		2	1	173124749	3476
ENSMUSG00000038388	protein_coding	Mpp6	ENSMUST00000036225	protein_coding	alternative1	6	1	50110383	1896
ENSMUSG00000006731	protein_coding	B4galnt1	ENSMUST00000006914	protein_coding	principal1	10	1	127165225	2395
ENSMUSG00000000759	protein_coding	Tubgcp3	ENSMUST00000167547	retained_intron		8	-1	12672123	5724
ENSMUSG00000058444	protein_coding	Map2k5	ENSMUST00000216999	processed_transcript		9	-1	63377877	1150
ENSMUSG00000071680	processed_pseudogene	Gm7123	ENSMUST00000117647	processed_pseudogene		X	1	142412755	213
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000189097	retained_intron		9	-1	106438177	1885
ENSMUSG00000022529	protein_coding	Zfp263	ENSMUST00000023176	protein_coding	principal1	16	1	3744093	3241
ENSMUSG00000057068	protein_coding	Fam47e	ENSMUST00000149617	nonsense_mediated_decay		5	1	92555102	707
ENSMUSG00000015962	protein_coding	1700016C15Rik	ENSMUST00000016106	protein_coding	principal1	1	1	177729814	768
ENSMUSG00000000759	protein_coding	Tubgcp3	ENSMUST00000164861	retained_intron		8	-1	12655902	654
ENSMUSG00000081365	processed_pseudogene	Gm15031	ENSMUST00000121341	processed_pseudogene		X	1	142425327	210
ENSMUSG00000079349	protein_coding	Magea5	ENSMUST00000069556	protein_coding	principal1	X	-1	155063145	1360
ENSMUSG00000057068	protein_coding	Fam47e	ENSMUST00000176621	protein_coding		5	1	92571477	746
ENSMUSG00000038388	protein_coding	Mpp6	ENSMUST00000171601	nonsense_mediated_decay		6	1	50110407	845
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000217531	protein_coding		9	-1	106435163	466
ENSMUSG00000028639	protein_coding	Ybx1	ENSMUST00000079644	protein_coding	principal1	4	-1	119294604	1628
ENSMUSG00000006731	protein_coding	B4galnt1	ENSMUST00000217678	nonsense_mediated_decay		10	1	127165227	2212
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000214275	protein_coding		9	-1	106438188	1284
ENSMUSG00000000759	protein_coding	Tubgcp3	ENSMUST00000165321	nonsense_mediated_decay		8	-1	12657634	458
ENSMUSG00000057068	protein_coding	Fam47e	ENSMUST00000175974	protein_coding		5	1	92571536	1016
ENSMUSG00000000759	protein_coding	Tubgcp3	ENSMUST00000172056	nonsense_mediated_decay		8	-1	12671959	419
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000187324	retained_intron		9	-1	106438161	1832
ENSMUSG00000038388	protein_coding	Mpp6	ENSMUST00000167628	protein_coding		6	1	50110860	1281
ENSMUSG00000079349	protein_coding	Magea5	ENSMUST00000169540	protein_coding	principal1	X	-1	155061553	1563
ENSMUSG00000036244	protein_coding	Tbc1d21	ENSMUST00000040217	protein_coding	principal1	9	-1	58370455	1283
ENSMUSG00000028639	protein_coding	Ybx1	ENSMUST00000152733	processed_transcript		4	-1	119294500	479
ENSMUSG00000057068	protein_coding	Fam47e	ENSMUST00000131166	protein_coding		5	1	92571537	1500
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000064272	protein_coding	principal1	1	1	171270328	1998
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000215395	protein_coding		9	-1	106437737	1051
ENSMUSG00000054910	processed_transcript	4931415C17Rik	ENSMUST00000131064	processed_transcript		8	1	12672427	2255
ENSMUSG00000028639	protein_coding	Ybx1	ENSMUST00000139897	processed_transcript		4	-1	119294490	561
ENSMUSG00000116464	processed_pseudogene	Gm49523	ENSMUST00000230801	processed_pseudogene		15	-1	85016424	628
ENSMUSG00000054910	processed_transcript	4931415C17Rik	ENSMUST00000068194	processed_transcript		8	1	12672186	1303
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000215506	nonsense_mediated_decay		9	-1	106437737	1122
ENSMUSG00000057068	protein_coding	Fam47e	ENSMUST00000176448	protein_coding		5	1	92571543	523
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000216400	protein_coding		9	-1	106437737	1030
ENSMUSG00000038388	protein_coding	Mpp6	ENSMUST00000167063	processed_transcript		6	1	50180300	637
ENSMUSG00000036244	protein_coding	Tbc1d21	ENSMUST00000213847	nonsense_mediated_decay		9	-1	58370369	1146
ENSMUSG00000057068	protein_coding	Fam47e	ENSMUST00000082382	protein_coding		5	1	92571556	750
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000190803	nonsense_mediated_decay		9	-1	106438202	771
ENSMUSG00000028639	protein_coding	Ybx1	ENSMUST00000127737	protein_coding		4	-1	119282792	1054
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000151863	protein_coding		1	1	171270339	869
ENSMUSG00000057402	protein_coding	Cldn34b2	ENSMUST00000076671	protein_coding	principal1	X	-1	155128412	1077
ENSMUSG00000028639	protein_coding	Ybx1	ENSMUST00000142884	processed_transcript		4	-1	119294480	482
ENSMUSG00000038388	protein_coding	Mpp6	ENSMUST00000167319	retained_intron		6	1	50194416	616
ENSMUSG00000006731	protein_coding	B4galnt1	ENSMUST00000219523	retained_intron		10	1	127165378	1497
ENSMUSG00000022529	protein_coding	Zfp263	ENSMUST00000159425	retained_intron		16	1	3744175	4177
ENSMUSG00000081186	processed_pseudogene	Gm12578	ENSMUST00000121244	processed_pseudogene		4	1	58589764	417
ENSMUSG00000032915	protein_coding	Adgre4	ENSMUST00000025004	protein_coding	principal1	17	1	55749984	3491
ENSMUSG00000028639	protein_coding	Ybx1	ENSMUST00000144992	processed_transcript		4	-1	119282186	551
ENSMUSG00000100487	lincRNA	1700072B07Rik	ENSMUST00000191141	lincRNA		9	1	58370504	445
ENSMUSG00000074469	lincRNA	Gm15348	ENSMUST00000151188	lincRNA		8	-1	12719127	3655
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000190972	protein_coding		9	-1	106438319	855
ENSMUSG00000045694	processed_pseudogene	Gm4997	ENSMUST00000154056	processed_pseudogene		X	-1	155151311	360
ENSMUSG00000006731	protein_coding	B4galnt1	ENSMUST00000218977	retained_intron		10	1	127165831	1420
ENSMUSG00000023262	protein_coding	Acy1	ENSMUST00000190900	protein_coding		9	-1	106438187	616
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000141999	protein_coding		1	1	171270343	583
ENSMUSG00000028639	protein_coding	Ybx1	ENSMUST00000145976	processed_transcript		4	-1	119279450	718
ENSMUSG00000006731	protein_coding	B4galnt1	ENSMUST00000220055	retained_intron		10	1	127165859	1499
ENSMUSG00000022529	protein_coding	Zfp263	ENSMUST00000162207	protein_coding		16	1	3747887	2452
ENSMUSG00000113270	processed_pseudogene	Gm48235	ENSMUST00000222039	processed_pseudogene		13	1	75509279	769
ENSMUSG00000097651	lincRNA	4930461G14Rik	ENSMUST00000181967	lincRNA		9	1	58455122	843
ENSMUSG00000113773	processed_pseudogene	Gm8278	ENSMUST00000222840	processed_pseudogene		13	-1	75518414	1121
ENSMUSG00000115068	processed_pseudogene	Gm48926	ENSMUST00000228659	processed_pseudogene		15	1	52013284	181
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000111313	protein_coding	principal1	1	1	171270343	2098
ENSMUSG00000113929	processed_pseudogene	Gm3926	ENSMUST00000223378	processed_pseudogene		13	-1	75524348	1123
ENSMUSG00000034327	protein_coding	Kctd9	ENSMUST00000152243	protein_coding		14	1	67715937	2528
ENSMUSG00000115238	processed_pseudogene	Gm19236	ENSMUST00000228163	processed_pseudogene		15	1	52033369	2698
ENSMUSG00000022529	protein_coding	Zfp263	ENSMUST00000161630	nonsense_mediated_decay		16	1	3744232	3856
ENSMUSG00000073652	antisense	Apol7d	ENSMUST00000097699	antisense		1	1	71652837	826
ENSMUSG00000066129	protein_coding	Kndc1	ENSMUST00000154782	processed_transcript		7	1	139894696	7300
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000123954	retained_intron		1	1	171270354	566
ENSMUSG00000022529	protein_coding	Zfp263	ENSMUST00000160923	processed_transcript		16	1	3744360	1095
ENSMUSG00000105335	lincRNA	Gm42423	ENSMUST00000196396	lincRNA		5	1	139895809	670
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000126699	protein_coding		1	1	171270365	1758
ENSMUSG00000022529	protein_coding	Zfp263	ENSMUST00000159060	processed_transcript		16	1	3744597	566
ENSMUSG00000022529	protein_coding	Zfp263	ENSMUST00000159469	processed_transcript		16	1	3744182	2191
ENSMUSG00000073652	antisense	Apol7d	ENSMUST00000127218	antisense		1	1	71652888	426
ENSMUSG00000048118	protein_coding	Arid4a	ENSMUST00000046305	protein_coding	principal1	12	1	71015990	4998
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000129985	retained_intron		1	1	171270374	2805
ENSMUSG00000073652	antisense	Apol7d	ENSMUST00000126516	antisense		1	1	71653335	1193
ENSMUSG00000022435	protein_coding	Upk3a	ENSMUST00000023070	protein_coding	principal1	15	1	85017141	1093
ENSMUSG00000016637	protein_coding	Ift27	ENSMUST00000230844	protein_coding		15	-1	78173473	760
ENSMUSG00000070495	protein_coding	Ctcfl	ENSMUST00000094287	protein_coding	principal1	2	-1	173119525	3217
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000138904	processed_transcript		1	1	171270408	440
ENSMUSG00000048988	protein_coding	Elfn1	ENSMUST00000050519	protein_coding	principal1	5	1	139907943	3832
ENSMUSG00000073652	antisense	Apol7d	ENSMUST00000125934	antisense		1	1	71653339	430
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000125939	retained_intron		1	1	171270818	728
ENSMUSG00000083823	processed_pseudogene	Amd-ps1	ENSMUST00000120127	processed_pseudogene		X	1	155155195	994
ENSMUSG00000070495	protein_coding	Ctcfl	ENSMUST00000179693	protein_coding	principal1	2	-1	173119525	3174
ENSMUSG00000039031	protein_coding	Arhgap18	ENSMUST00000176060	protein_coding		10	1	26753421	755
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000141114	protein_coding		1	1	171271640	446
ENSMUSG00000048988	protein_coding	Elfn1	ENSMUST00000198608	processed_transcript		5	1	139908474	413
ENSMUSG00000081364	processed_pseudogene	Gm8595	ENSMUST00000118250	processed_pseudogene		X	1	155179281	630
ENSMUSG00000106090	processed_pseudogene	Gm43704	ENSMUST00000196164	processed_pseudogene		5	-1	139963791	496
ENSMUSG00000052423	protein_coding	B4galt3	ENSMUST00000132890	retained_intron		1	1	171273515	3261
ENSMUSG00000082560	processed_pseudogene	Gm15157	ENSMUST00000121852	processed_pseudogene		X	1	155185679	702
ENSMUSG00000048118	protein_coding	Arid4a	ENSMUST00000134718	processed_transcript		12	1	71016029	1639
ENSMUSG00000016637	protein_coding	Ift27	ENSMUST00000016781	protein_coding	principal1	15	-1	78174107	1013
ENSMUSG00000048118	protein_coding	Arid4a	ENSMUST00000125125	protein_coding		12	1	71016708	1320
ENSMUSG00000016637	protein_coding	Ift27	ENSMUST00000231069	retained_intron		15	-1	78166936	1569
ENSMUSG00000028795	protein_coding	Ccdc28b	ENSMUST00000030586	protein_coding	principal1	4	-1	129623947	879
ENSMUSG00000016637	protein_coding	Ift27	ENSMUST00000229476	protein_coding		15	-1	78172468	375
ENSMUSG00000048118	protein_coding	Arid4a	ENSMUST00000135709	protein_coding		12	1	71048341	1887
ENSMUSG00000022434	protein_coding	Fam118a	ENSMUST00000229629	retained_intron		15	1	85028948	703
ENSMUSG00000075402	protein_coding	Krt76	ENSMUST00000100179	protein_coding	principal1	15	-1	101892920	2312
ENSMUSG00000068522	protein_coding	Aard	ENSMUST00000090025	protein_coding	principal1	15	1	52040107	1348
ENSMUSG00000016637	protein_coding	Ift27	ENSMUST00000229417	processed_transcript		15	-1	78168283	483
ENSMUSG00000028795	protein_coding	Ccdc28b	ENSMUST00000141361	retained_intron		4	-1	129620915	428
ENSMUSG00000115457	processed_pseudogene	Gm2387	ENSMUST00000227885	processed_pseudogene		15	1	52089308	646
ENSMUSG00000039585	protein_coding	Myo9a	ENSMUST00000136740	protein_coding	principal2	9	1	59750896	12252
ENSMUSG00000116194	unprocessed_pseudogene	Gm49434	ENSMUST00000230923	unprocessed_pseudogene		15	-1	101910149	1065
ENSMUSG00000115738	processed_pseudogene	Gm7543	ENSMUST00000226174	processed_pseudogene		15	1	52259123	572
ENSMUSG00000040632	protein_coding	Nrl	ENSMUST00000062232	protein_coding	principal1	14	-1	55524981	2504
ENSMUSG00000039585	protein_coding	Myo9a	ENSMUST00000135298	protein_coding	alternative2	9	1	59750896	12198
ENSMUSG00000031620	protein_coding	Iqcm	ENSMUST00000034033	protein_coding	principal1	8	1	75448694	2014
ENSMUSG00000039585	protein_coding	Myo9a	ENSMUST00000128341	protein_coding	alternative2	9	1	59750896	11985
ENSMUSG00000028795	protein_coding	Ccdc28b	ENSMUST00000124630	processed_transcript		4	-1	129621421	615
ENSMUSG00000028795	protein_coding	Ccdc28b	ENSMUST00000151838	nonsense_mediated_decay		4	-1	129623837	744
ENSMUSG00000031620	protein_coding	Iqcm	ENSMUST00000212704	protein_coding	principal1	8	1	75448791	2035
ENSMUSG00000039585	protein_coding	Myo9a	ENSMUST00000147364	processed_transcript		9	1	59871771	515
ENSMUSG00000028795	protein_coding	Ccdc28b	ENSMUST00000106035	protein_coding		4	-1	129623878	821
ENSMUSG00000031620	protein_coding	Iqcm	ENSMUST00000121983	protein_coding	principal1	8	1	75448983	1894
ENSMUSG00000028795	protein_coding	Ccdc28b	ENSMUST00000123943	processed_transcript		4	-1	129622725	431
ENSMUSG00000103054	TEC	Gm38270	ENSMUST00000192721	TEC		8	-1	75596185	407
ENSMUSG00000040632	protein_coding	Nrl	ENSMUST00000178694	protein_coding	principal1	14	-1	55524965	1928
ENSMUSG00000028795	protein_coding	Ccdc28b	ENSMUST00000150357	protein_coding		4	-1	129623886	456
ENSMUSG00000039585	protein_coding	Myo9a	ENSMUST00000127933	retained_intron		9	1	59907093	783
ENSMUSG00000040632	protein_coding	Nrl	ENSMUST00000228351	retained_intron		14	-1	55524492	4973
ENSMUSG00000039585	protein_coding	Myo9a	ENSMUST00000151167	retained_intron		9	1	59896524	564
ENSMUSG00000028795	protein_coding	Ccdc28b	ENSMUST00000152708	retained_intron		4	-1	129623844	923
ENSMUSG00000039031	protein_coding	Arhgap18	ENSMUST00000039557	protein_coding	principal1	10	1	26772477	3651
ENSMUSG00000028795	protein_coding	Ccdc28b	ENSMUST00000152290	retained_intron		4	-1	129623899	493
ENSMUSG00000040632	protein_coding	Nrl	ENSMUST00000226858	processed_transcript		14	-1	55521267	731
ENSMUSG00000039585	protein_coding	Myo9a	ENSMUST00000130497	retained_intron		9	1	59905840	679
ENSMUSG00000066129	protein_coding	Kndc1	ENSMUST00000121839	protein_coding		7	1	139894839	2210
ENSMUSG00000039031	protein_coding	Arhgap18	ENSMUST00000220012	retained_intron		10	1	26772547	2868
ENSMUSG00000040632	protein_coding	Nrl	ENSMUST00000228287	protein_coding		14	-1	55524958	742
ENSMUSG00000075701	protein_coding	Selenos	ENSMUST00000101801	protein_coding	principal2	7	1	66079649	1191
ENSMUSG00000039887	protein_coding	Alg14	ENSMUST00000039442	protein_coding	principal1	3	1	121291773	2037
ENSMUSG00000066129	protein_coding	Kndc1	ENSMUST00000156941	retained_intron		7	1	139923552	4039
ENSMUSG00000078552	protein_coding	Dcdc2b	ENSMUST00000143374	retained_intron		4	-1	129609248	482
ENSMUSG00000039585	protein_coding	Myo9a	ENSMUST00000126631	retained_intron		9	1	59909898	407
ENSMUSG00000040632	protein_coding	Nrl	ENSMUST00000228902	protein_coding		14	-1	55524607	733
ENSMUSG00000113690	processed_pseudogene	Gm36501	ENSMUST00000221857	processed_pseudogene		13	1	62151170	745
ENSMUSG00000111833	processed_pseudogene	Gm48805	ENSMUST00000214655	processed_pseudogene		9	-1	59885397	414
ENSMUSG00000039031	protein_coding	Arhgap18	ENSMUST00000135866	protein_coding		10	1	26822602	374
ENSMUSG00000066129	protein_coding	Kndc1	ENSMUST00000210154	retained_intron		7	1	139935746	3319
ENSMUSG00000074867	protein_coding	Zfp808	ENSMUST00000221772	protein_coding		13	1	62129886	1379
ENSMUSG00000062729	protein_coding	Ppox	ENSMUST00000155083	retained_intron		1	-1	171281186	4411
ENSMUSG00000040632	protein_coding	Nrl	ENSMUST00000111404	protein_coding	principal1	14	-1	55524191	2422
ENSMUSG00000039887	protein_coding	Alg14	ENSMUST00000198235	nonsense_mediated_decay		3	1	121291798	474
ENSMUSG00000021223	protein_coding	Papln	ENSMUST00000121733	protein_coding		12	1	83763634	4373
ENSMUSG00000074867	protein_coding	Zfp808	ENSMUST00000222809	processed_transcript		13	1	62129900	355
ENSMUSG00000074867	protein_coding	Zfp808	ENSMUST00000223094	processed_transcript		13	1	62129900	700
ENSMUSG00000074867	protein_coding	Zfp808	ENSMUST00000221542	processed_transcript		13	1	62129902	1560
ENSMUSG00000039887	protein_coding	Alg14	ENSMUST00000199554	protein_coding		3	1	121291827	441
ENSMUSG00000074867	protein_coding	Zfp808	ENSMUST00000099449	protein_coding	principal1	13	1	62129916	2571
ENSMUSG00000078552	protein_coding	Dcdc2b	ENSMUST00000106037	protein_coding		4	-1	129614254	1023
ENSMUSG00000039887	protein_coding	Alg14	ENSMUST00000198341	protein_coding		3	1	121291890	831
ENSMUSG00000074867	protein_coding	Zfp808	ENSMUST00000222947	processed_transcript		13	1	62129933	765
ENSMUSG00000078552	protein_coding	Dcdc2b	ENSMUST00000179209	protein_coding	principal1	4	-1	129614257	864
ENSMUSG00000074867	protein_coding	Zfp808	ENSMUST00000221618	processed_transcript		13	1	62219556	449
ENSMUSG00000039031	protein_coding	Arhgap18	ENSMUST00000142284	processed_transcript		10	1	26863342	2669
ENSMUSG00000071262	protein_coding	Zfp957	ENSMUST00000161649	protein_coding	principal1	14	-1	79247367	2751
ENSMUSG00000021223	protein_coding	Papln	ENSMUST00000021646	protein_coding	principal1	12	1	83763654	4260
ENSMUSG00000071262	protein_coding	Zfp957	ENSMUST00000162937	retained_intron		14	-1	79247369	1088
ENSMUSG00000075701	protein_coding	Selenos	ENSMUST00000205965	retained_intron		7	1	66079677	702
ENSMUSG00000071262	protein_coding	Zfp957	ENSMUST00000040802	protein_coding	principal1	14	-1	79223876	2613
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000206034	protein_coding	alternative2	7	-1	116031047	8668
ENSMUSG00000025366	protein_coding	Esyt1	ENSMUST00000026427	protein_coding	principal1	10	-1	128525870	3981
ENSMUSG00000115045	processed_pseudogene	Gm49028	ENSMUST00000226573	processed_pseudogene		14	1	79260453	930
ENSMUSG00000075701	protein_coding	Selenos	ENSMUST00000206575	protein_coding	alternative1	7	1	66079678	1157
ENSMUSG00000059668	protein_coding	Krt4	ENSMUST00000023797	protein_coding	principal1	15	-1	101924735	2133
ENSMUSG00000034327	protein_coding	Kctd9	ENSMUST00000078053	protein_coding		14	1	67716098	3157
ENSMUSG00000021223	protein_coding	Papln	ENSMUST00000152904	retained_intron		12	1	83763662	3622
ENSMUSG00000025366	protein_coding	Esyt1	ENSMUST00000220429	nonsense_mediated_decay		10	-1	128520306	2555
ENSMUSG00000075701	protein_coding	Selenos	ENSMUST00000205279	nonsense_mediated_decay		7	1	66079687	897
ENSMUSG00000075701	protein_coding	Selenos	ENSMUST00000206044	protein_coding		7	1	66079961	911
ENSMUSG00000034327	protein_coding	Kctd9	ENSMUST00000145542	protein_coding		14	1	67716140	470
ENSMUSG00000034327	protein_coding	Kctd9	ENSMUST00000125212	protein_coding		14	1	67716151	356
ENSMUSG00000074800	processed_pseudogene	Gm4149	ENSMUST00000099371	processed_pseudogene		13	1	75644896	276
ENSMUSG00000034327	protein_coding	Kctd9	ENSMUST00000150768	protein_coding	principal1	14	1	67716262	1302
ENSMUSG00000094806	protein_coding	Cyp2d10	ENSMUST00000230198	protein_coding		15	-1	82407171	1482
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000169129	protein_coding	alternative2	7	-1	115824710	5122
ENSMUSG00000034327	protein_coding	Kctd9	ENSMUST00000156700	nonsense_mediated_decay		14	1	67716285	3098
ENSMUSG00000030281	protein_coding	Il17rc	ENSMUST00000058300	protein_coding	principal1	6	1	113471427	2302
ENSMUSG00000022434	protein_coding	Fam118a	ENSMUST00000023069	protein_coding	principal1	15	1	85037089	2518
ENSMUSG00000022018	protein_coding	Rgcc	ENSMUST00000022595	protein_coding	principal1	14	-1	79301645	918
ENSMUSG00000061397	protein_coding	Krt79	ENSMUST00000023799	protein_coding	principal1	15	-1	101940324	2097
ENSMUSG00000061397	protein_coding	Krt79	ENSMUST00000230273	retained_intron		15	-1	101930971	607
ENSMUSG00000022434	protein_coding	Fam118a	ENSMUST00000229153	retained_intron		15	1	85037125	1974
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000206369	protein_coding	alternative2	7	-1	115846140	2863
ENSMUSG00000022434	protein_coding	Fam118a	ENSMUST00000230382	retained_intron		15	1	85037187	430
ENSMUSG00000061397	protein_coding	Krt79	ENSMUST00000229195	processed_transcript		15	-1	101936519	465
ENSMUSG00000022434	protein_coding	Fam118a	ENSMUST00000230213	protein_coding		15	1	85037202	298
ENSMUSG00000061397	protein_coding	Krt79	ENSMUST00000230441	retained_intron		15	-1	101933987	2451
ENSMUSG00000030281	protein_coding	Il17rc	ENSMUST00000204447	protein_coding		6	1	113472283	426
ENSMUSG00000022434	protein_coding	Fam118a	ENSMUST00000229203	protein_coding	principal1	15	1	85042742	2605
ENSMUSG00000026112	protein_coding	Coa5	ENSMUST00000027286	protein_coding	principal1	1	-1	37430103	3863
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000205405	protein_coding	alternative2	7	-1	115995086	2903
ENSMUSG00000022434	protein_coding	Fam118a	ENSMUST00000229691	processed_transcript		15	1	85053697	596
ENSMUSG00000030281	protein_coding	Il17rc	ENSMUST00000205208	protein_coding		6	1	113472794	1759
ENSMUSG00000026112	protein_coding	Coa5	ENSMUST00000192179	retained_intron		1	-1	37430000	1489
ENSMUSG00000030281	protein_coding	Il17rc	ENSMUST00000204632	protein_coding		6	1	113474255	186
ENSMUSG00000030281	protein_coding	Il17rc	ENSMUST00000203668	retained_intron		6	1	113476588	645
ENSMUSG00000094806	protein_coding	Cyp2d10	ENSMUST00000072776	protein_coding	principal1	15	-1	82407195	1648
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000077037	protein_coding	alternative1	15	1	102470550	2952
ENSMUSG00000094806	protein_coding	Cyp2d10	ENSMUST00000229911	protein_coding		15	-1	82407195	1141
ENSMUSG00000094806	protein_coding	Cyp2d10	ENSMUST00000229628	nonsense_mediated_decay		15	-1	82407195	1310
ENSMUSG00000094806	protein_coding	Cyp2d10	ENSMUST00000230843	protein_coding		15	-1	82405967	847
ENSMUSG00000025366	protein_coding	Esyt1	ENSMUST00000217948	retained_intron		10	-1	128525868	2796
ENSMUSG00000015961	protein_coding	Adss	ENSMUST00000016105	protein_coding	principal1	1	-1	177796511	2771
ENSMUSG00000094806	protein_coding	Cyp2d10	ENSMUST00000230248	protein_coding		15	-1	82407179	447
ENSMUSG00000025366	protein_coding	Esyt1	ENSMUST00000218092	retained_intron		10	-1	128518554	4038
ENSMUSG00000025366	protein_coding	Esyt1	ENSMUST00000220045	retained_intron		10	-1	128525871	3409
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229102	protein_coding		15	1	102470632	893
ENSMUSG00000062729	protein_coding	Ppox	ENSMUST00000073120	protein_coding	principal1	1	-1	171281186	1821
ENSMUSG00000081750	processed_pseudogene	Gm4995	ENSMUST00000117247	processed_pseudogene		X	-1	142533870	432
ENSMUSG00000114125	antisense	1700037F03Rik	ENSMUST00000223032	antisense		13	-1	75707172	365
ENSMUSG00000081568	processed_pseudogene	Gm15032	ENSMUST00000118547	processed_pseudogene		X	-1	142622902	411
ENSMUSG00000015961	protein_coding	Adss	ENSMUST00000161808	retained_intron		1	-1	177796501	1733
ENSMUSG00000015961	protein_coding	Adss	ENSMUST00000159184	retained_intron		1	-1	177768601	2069
ENSMUSG00000089657	processed_pseudogene	Gm16585	ENSMUST00000161442	processed_pseudogene		1	1	177786856	610
ENSMUSG00000062729	protein_coding	Ppox	ENSMUST00000152689	retained_intron		1	-1	171281186	3042
ENSMUSG00000048600	processed_pseudogene	Gm5763	ENSMUST00000155951	processed_pseudogene		X	-1	142634015	1530
ENSMUSG00000106455	processed_pseudogene	Gm5711	ENSMUST00000197896	processed_pseudogene		3	-1	121380679	421
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229618	protein_coding	alternative1	15	1	102470653	1576
ENSMUSG00000062729	protein_coding	Ppox	ENSMUST00000192956	protein_coding		1	-1	171280760	1167
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000205980	retained_intron		7	-1	116033602	2258
ENSMUSG00000116697	lincRNA	Gm49694	ENSMUST00000231923	lincRNA		15	1	78174461	391
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000206775	processed_transcript		7	-1	115597896	828
ENSMUSG00000062729	protein_coding	Ppox	ENSMUST00000126765	retained_intron		1	-1	171279827	650
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229275	protein_coding		15	1	102470677	516
ENSMUSG00000062729	protein_coding	Ppox	ENSMUST00000145019	processed_transcript		1	-1	171280522	420
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000206573	retained_intron		7	-1	116038796	3855
ENSMUSG00000062729	protein_coding	Ppox	ENSMUST00000151442	retained_intron		1	-1	171281186	823
ENSMUSG00000115958	protein_coding	Gm28040	ENSMUST00000193888	protein_coding	principal1	1	1	133309827	624
ENSMUSG00000062729	protein_coding	Ppox	ENSMUST00000133050	retained_intron		1	-1	171281119	604
ENSMUSG00000017652	protein_coding	Cd40	ENSMUST00000017799	protein_coding	principal4	2	1	165055627	2986
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000205479	protein_coding		7	-1	115662365	331
ENSMUSG00000054827	protein_coding	Cyp2c50	ENSMUST00000068094	protein_coding		19	1	40089688	1643
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000206427	retained_intron		7	-1	115662365	553
ENSMUSG00000031194	protein_coding	4931400O07Rik	ENSMUST00000033537	protein_coding	principal1	X	1	62467991	647
ENSMUSG00000036667	protein_coding	Tcaf1	ENSMUST00000045054	protein_coding	principal1	6	-1	42710088	5257
ENSMUSG00000115958	protein_coding	Gm28040	ENSMUST00000194044	protein_coding	principal1	1	1	133309827	583
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000206123	protein_coding		7	-1	115859852	448
ENSMUSG00000115958	protein_coding	Gm28040	ENSMUST00000195286	protein_coding	principal1	1	1	133323966	656
ENSMUSG00000106022	TEC	Gm42929	ENSMUST00000198374	TEC		3	1	121428046	1286
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000205818	processed_transcript		7	-1	116034513	479
ENSMUSG00000033327	protein_coding	Tnxb	ENSMUST00000238967	protein_coding	principal5	17	1	34660457	13300
ENSMUSG00000105813	TEC	Gm42928	ENSMUST00000197338	TEC		3	-1	121427574	3339
ENSMUSG00000036667	protein_coding	Tcaf1	ENSMUST00000121083	protein_coding	principal1	6	-1	42693087	3342
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000206912	retained_intron		7	-1	115846151	1980
ENSMUSG00000085757	lincRNA	Tslrn1	ENSMUST00000133350	lincRNA		X	-1	62516069	594
ENSMUSG00000085757	lincRNA	Tslrn1	ENSMUST00000129479	lincRNA		X	-1	62527011	747
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000231089	protein_coding		15	1	102470757	843
ENSMUSG00000042788	protein_coding	Fam166b	ENSMUST00000052829	protein_coding		4	-1	43429134	1349
ENSMUSG00000054827	protein_coding	Cyp2c50	ENSMUST00000080171	protein_coding	principal1	19	1	40089696	1812
ENSMUSG00000033327	protein_coding	Tnxb	ENSMUST00000168533	protein_coding		17	1	34670535	9381
ENSMUSG00000091742	processed_pseudogene	Gm5093	ENSMUST00000166852	processed_pseudogene		17	-1	46440097	520
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000072804	protein_coding	principal4	7	-1	115995086	8227
ENSMUSG00000081001	processed_pseudogene	Gm14678	ENSMUST00000121396	processed_pseudogene		X	1	62646725	482
ENSMUSG00000055489	protein_coding	Ano5	ENSMUST00000043944	protein_coding		7	1	51511029	7785
ENSMUSG00000081765	processed_pseudogene	Gm14677	ENSMUST00000117866	processed_pseudogene		X	1	62686050	486
ENSMUSG00000036667	protein_coding	Tcaf1	ENSMUST00000045140	protein_coding	principal1	6	-1	42693059	5256
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000166877	protein_coding	alternative2	7	-1	116038744	8079
ENSMUSG00000054827	protein_coding	Cyp2c50	ENSMUST00000124391	retained_intron		19	1	40089735	1824
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000106612	protein_coding	alternative2	7	-1	116031047	8193
ENSMUSG00000047675	protein_coding	Rps8	ENSMUST00000102696	protein_coding	principal1	4	-1	117156243	860
ENSMUSG00000081752	processed_pseudogene	Sms-ps	ENSMUST00000121773	processed_pseudogene		X	-1	62776685	1101
ENSMUSG00000033327	protein_coding	Tnxb	ENSMUST00000238305	protein_coding	alternative2	17	1	34670535	12533
ENSMUSG00000051910	protein_coding	Sox6	ENSMUST00000166207	protein_coding	principal4	7	-1	115846105	2825
ENSMUSG00000033327	protein_coding	Tnxb	ENSMUST00000087399	protein_coding	alternative2	17	1	34670535	12209
ENSMUSG00000108489	antisense	Gm45025	ENSMUST00000206043	antisense		7	1	115995274	2389
ENSMUSG00000055489	protein_coding	Ano5	ENSMUST00000207044	protein_coding		7	1	51511041	3311
ENSMUSG00000036667	protein_coding	Tcaf1	ENSMUST00000152100	retained_intron		6	-1	42693003	2348
ENSMUSG00000017652	protein_coding	Cd40	ENSMUST00000081310	protein_coding		2	1	165055680	668
ENSMUSG00000047675	protein_coding	Rps8	ENSMUST00000137423	retained_intron		4	-1	117154497	353
ENSMUSG00000066129	protein_coding	Kndc1	ENSMUST00000053445	protein_coding	principal1	7	1	139894696	7299
ENSMUSG00000047675	protein_coding	Rps8	ENSMUST00000127037	retained_intron		4	-1	117155181	601
ENSMUSG00000009246	protein_coding	Trpm5	ENSMUST00000009390	protein_coding	principal1	7	-1	143094642	4123
ENSMUSG00000055489	protein_coding	Ano5	ENSMUST00000207717	protein_coding	principal1	7	1	51511107	2753
ENSMUSG00000036667	protein_coding	Tcaf1	ENSMUST00000165486	processed_transcript		6	-1	42710071	643
ENSMUSG00000092471	unprocessed_pseudogene	Cyp21a2-ps	ENSMUST00000172970	unprocessed_pseudogene		17	-1	34722252	1383
ENSMUSG00000017652	protein_coding	Cd40	ENSMUST00000140951	protein_coding		2	1	165055681	391
ENSMUSG00000047675	protein_coding	Rps8	ENSMUST00000140226	retained_intron		4	-1	117156084	1120
ENSMUSG00000103421	protein_coding	Golt1a	ENSMUST00000094557	protein_coding	principal1	1	1	133309800	1865
ENSMUSG00000040084	protein_coding	Bub1b	ENSMUST00000038341	protein_coding	principal1	2	1	118598211	3668
ENSMUSG00000017652	protein_coding	Cd40	ENSMUST00000184221	nonsense_mediated_decay		2	1	165055704	1062
ENSMUSG00000047675	protein_coding	Rps8	ENSMUST00000144051	retained_intron		4	-1	117156069	523
ENSMUSG00000009246	protein_coding	Trpm5	ENSMUST00000146075	retained_intron		7	-1	143087129	3897
ENSMUSG00000047675	protein_coding	Rps8	ENSMUST00000141219	retained_intron		4	-1	117156072	544
ENSMUSG00000036667	protein_coding	Tcaf1	ENSMUST00000151021	retained_intron		6	-1	42710071	1942
ENSMUSG00000009246	protein_coding	Trpm5	ENSMUST00000150867	nonsense_mediated_decay		7	-1	143094606	3620
ENSMUSG00000017652	protein_coding	Cd40	ENSMUST00000153105	retained_intron		2	1	165062676	545
ENSMUSG00000103421	protein_coding	Golt1a	ENSMUST00000192465	protein_coding		1	1	133309890	407
ENSMUSG00000040084	protein_coding	Bub1b	ENSMUST00000127356	retained_intron		2	1	118600118	385
ENSMUSG00000009246	protein_coding	Trpm5	ENSMUST00000133027	retained_intron		7	-1	143081922	474
ENSMUSG00000040084	protein_coding	Bub1b	ENSMUST00000130512	retained_intron		2	1	118630577	574
ENSMUSG00000049608	protein_coding	Gpr55	ENSMUST00000086975	protein_coding	principal1	1	-1	85961007	3721
ENSMUSG00000036667	protein_coding	Tcaf1	ENSMUST00000141794	processed_transcript		6	-1	42693008	457
ENSMUSG00000042788	protein_coding	Fam166b	ENSMUST00000171134	protein_coding		4	-1	43429117	1198
ENSMUSG00000036667	protein_coding	Tcaf1	ENSMUST00000153952	processed_transcript		6	-1	42710072	453
ENSMUSG00000040084	protein_coding	Bub1b	ENSMUST00000126013	retained_intron		2	1	118631540	661
ENSMUSG00000098439	sense_intronic	Hm629797	ENSMUST00000183645	sense_intronic		8	1	85994245	2398
ENSMUSG00000025283	protein_coding	Sat1	ENSMUST00000026318	protein_coding	principal1	X	-1	155216449	1162
ENSMUSG00000017652	protein_coding	Cd40	ENSMUST00000073707	protein_coding	alternative2	2	1	165055636	1596
ENSMUSG00000100392	lincRNA	Gm28935	ENSMUST00000185737	lincRNA		19	1	11362278	568
ENSMUSG00000042788	protein_coding	Fam166b	ENSMUST00000155080	protein_coding		4	-1	43428027	292
ENSMUSG00000026224	protein_coding	4933407L21Rik	ENSMUST00000027426	protein_coding	principal5	1	1	85928483	1146
ENSMUSG00000022020	protein_coding	Naa16	ENSMUST00000022597	protein_coding	principal1	14	-1	79390778	13223
ENSMUSG00000103771	processed_pseudogene	Gm36934	ENSMUST00000192007	processed_pseudogene		1	1	155864960	306
ENSMUSG00000081995	processed_pseudogene	Gm11719	ENSMUST00000119399	processed_pseudogene		11	1	107330708	351
ENSMUSG00000087683	antisense	Gm11712	ENSMUST00000129139	antisense		11	1	107386983	367
ENSMUSG00000026224	protein_coding	4933407L21Rik	ENSMUST00000129392	protein_coding	alternative2	1	1	85928727	503
ENSMUSG00000026224	protein_coding	4933407L21Rik	ENSMUST00000188949	retained_intron		1	1	85928886	2869
ENSMUSG00000087113	processed_transcript	Gm11714	ENSMUST00000136927	processed_transcript		11	1	107428276	876
ENSMUSG00000098306	protein_coding	Gm28040	ENSMUST00000184603	protein_coding	principal1	1	1	133309827	890
ENSMUSG00000022020	protein_coding	Naa16	ENSMUST00000171928	retained_intron		14	-1	79343197	3916
ENSMUSG00000099767	antisense	Gm28884	ENSMUST00000190367	antisense		1	-1	85937332	3994
ENSMUSG00000086298	antisense	Gm11716	ENSMUST00000154414	antisense		11	1	107338050	470
ENSMUSG00000024472	protein_coding	Dcp2	ENSMUST00000202306	protein_coding		18	1	44380502	398
ENSMUSG00000036879	protein_coding	Phkb	ENSMUST00000159716	processed_transcript		8	1	85840959	481
ENSMUSG00000098306	protein_coding	Gm28040	ENSMUST00000183489	nonsense_mediated_decay		1	1	133309827	1465
ENSMUSG00000042788	protein_coding	Fam166b	ENSMUST00000107929	protein_coding	principal5	4	-1	43429089	865
ENSMUSG00000027959	protein_coding	Sass6	ENSMUST00000198386	protein_coding	alternative2	3	1	116594982	1894
ENSMUSG00000022020	protein_coding	Naa16	ENSMUST00000227775	processed_transcript		14	-1	79350821	1287
ENSMUSG00000022020	protein_coding	Naa16	ENSMUST00000163486	nonsense_mediated_decay		14	-1	79387106	2154
ENSMUSG00000042788	protein_coding	Fam166b	ENSMUST00000107928	protein_coding	alternative2	4	-1	43429089	762
ENSMUSG00000042788	protein_coding	Fam166b	ENSMUST00000149676	nonsense_mediated_decay		4	-1	43429089	374
ENSMUSG00000027959	protein_coding	Sass6	ENSMUST00000198514	processed_transcript		3	1	116595003	357
ENSMUSG00000001542	protein_coding	Ell2	ENSMUST00000001583	protein_coding	principal1	13	1	75706757	4382
ENSMUSG00000022020	protein_coding	Naa16	ENSMUST00000169500	nonsense_mediated_decay		14	-1	79390692	760
ENSMUSG00000022020	protein_coding	Naa16	ENSMUST00000165337	retained_intron		14	-1	79390690	368
ENSMUSG00000001542	protein_coding	Ell2	ENSMUST00000220572	nonsense_mediated_decay		13	1	75707585	586
ENSMUSG00000083223	processed_pseudogene	Gm15016	ENSMUST00000117300	processed_pseudogene		X	1	135988547	720
ENSMUSG00000001542	protein_coding	Ell2	ENSMUST00000222194	protein_coding		13	1	75707590	434
ENSMUSG00000074354	antisense	Arhgap20os	ENSMUST00000125400	antisense		9	-1	51875803	1388
ENSMUSG00000025283	protein_coding	Sat1	ENSMUST00000152463	nonsense_mediated_decay		X	-1	155216449	1272
ENSMUSG00000022177	protein_coding	Haus4	ENSMUST00000022784	protein_coding	principal1	14	-1	54554361	1587
ENSMUSG00000074354	antisense	Arhgap20os	ENSMUST00000142579	antisense		9	-1	51875885	1399
ENSMUSG00000074354	antisense	Arhgap20os	ENSMUST00000152203	antisense		9	-1	51875886	2113
ENSMUSG00000022177	protein_coding	Haus4	ENSMUST00000226832	protein_coding		14	-1	54543835	326
ENSMUSG00000048040	protein_coding	Arxes2	ENSMUST00000058119	protein_coding	principal1	X	1	135993824	1532
ENSMUSG00000074354	antisense	Arhgap20os	ENSMUST00000130086	antisense		9	-1	51875788	601
ENSMUSG00000022177	protein_coding	Haus4	ENSMUST00000226250	retained_intron		14	-1	54544489	294
ENSMUSG00000001542	protein_coding	Ell2	ENSMUST00000221432	retained_intron		13	1	75707711	511
ENSMUSG00000025283	protein_coding	Sat1	ENSMUST00000134855	retained_intron		X	-1	155214059	525
ENSMUSG00000022177	protein_coding	Haus4	ENSMUST00000226358	protein_coding		14	-1	54553978	772
ENSMUSG00000027959	protein_coding	Sass6	ENSMUST00000198311	protein_coding	principal2	3	1	116595008	2404
ENSMUSG00000001542	protein_coding	Ell2	ENSMUST00000223535	protein_coding		13	1	75707711	543
ENSMUSG00000001542	protein_coding	Ell2	ENSMUST00000222853	protein_coding		13	1	75707711	732
ENSMUSG00000022177	protein_coding	Haus4	ENSMUST00000227954	retained_intron		14	-1	54549813	342
ENSMUSG00000029060	protein_coding	Mib2	ENSMUST00000128204	processed_transcript		4	-1	155657979	2202
ENSMUSG00000025283	protein_coding	Sat1	ENSMUST00000138944	retained_intron		X	-1	155214904	1275
ENSMUSG00000001542	protein_coding	Ell2	ENSMUST00000222892	protein_coding		13	1	75746351	508
ENSMUSG00000027959	protein_coding	Sass6	ENSMUST00000197335	protein_coding		3	1	116595010	2458
ENSMUSG00000022177	protein_coding	Haus4	ENSMUST00000228883	processed_transcript		14	-1	54554445	602
ENSMUSG00000022177	protein_coding	Haus4	ENSMUST00000228043	retained_intron		14	-1	54554616	552
ENSMUSG00000048355	protein_coding	Arxes1	ENSMUST00000057625	protein_coding	principal1	X	1	136033367	1580
ENSMUSG00000001542	protein_coding	Ell2	ENSMUST00000222564	retained_intron		13	1	75755236	2351
ENSMUSG00000082620	processed_pseudogene	Gm8244	ENSMUST00000121254	processed_pseudogene		X	-1	62835775	264
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229802	protein_coding	alternative1	15	1	102470765	1215
ENSMUSG00000001542	protein_coding	Ell2	ENSMUST00000221979	retained_intron		13	1	75761983	5126
ENSMUSG00000082965	processed_pseudogene	Gm6754	ENSMUST00000117124	processed_pseudogene		X	-1	63035106	913
ENSMUSG00000113041	sense_intronic	Gm48302	ENSMUST00000222965	sense_intronic		13	1	75727279	1884
ENSMUSG00000081269	processed_pseudogene	Gm14659	ENSMUST00000117667	processed_pseudogene		X	-1	63186526	843
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229854	protein_coding	principal3	15	1	102470784	1499
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000172774	nonsense_mediated_decay		4	1	129600668	680
ENSMUSG00000025283	protein_coding	Sat1	ENSMUST00000150046	retained_intron		X	-1	155216332	1352
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000108838	protein_coding	alternative1	15	1	102470785	2571
ENSMUSG00000029060	protein_coding	Mib2	ENSMUST00000151843	processed_transcript		4	-1	155667109	3282
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229222	protein_coding		15	1	102471068	647
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000129515	nonsense_mediated_decay		4	1	129600668	1366
ENSMUSG00000114244	antisense	Gm47119	ENSMUST00000224870	antisense		17	1	46476507	585
ENSMUSG00000053931	protein_coding	Cnn3	ENSMUST00000029773	protein_coding	principal1	3	1	121426497	2049
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000137090	nonsense_mediated_decay		4	1	129600669	1575
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229918	protein_coding	alternative1	15	1	102471239	1463
ENSMUSG00000108699	processed_pseudogene	Gm18988	ENSMUST00000205601	processed_pseudogene		7	-1	66127699	746
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000078404	protein_coding	alternative1	15	1	102472737	3222
ENSMUSG00000025283	protein_coding	Sat1	ENSMUST00000112551	protein_coding		X	-1	155216345	896
ENSMUSG00000020691	protein_coding	Mettl2	ENSMUST00000021030	protein_coding	principal1	11	1	105126425	1867
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229958	protein_coding		15	1	102473270	789
ENSMUSG00000025283	protein_coding	Sat1	ENSMUST00000123337	retained_intron		X	-1	155216327	773
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229184	protein_coding		15	1	102473281	1090
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000046390	protein_coding	principal3	1	-1	51916071	5052
ENSMUSG00000084065	processed_pseudogene	Gm15159	ENSMUST00000117062	processed_pseudogene		X	1	155237498	764
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230728	protein_coding		15	1	102473303	873
ENSMUSG00000027959	protein_coding	Sass6	ENSMUST00000029571	nonsense_mediated_decay		3	1	116595012	4340
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230114	protein_coding	alternative1	15	1	102473334	1086
ENSMUSG00000027959	protein_coding	Sass6	ENSMUST00000196619	processed_transcript		3	1	116613336	819
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000114537	protein_coding	alternative1	1	-1	51915941	4618
ENSMUSG00000053931	protein_coding	Cnn3	ENSMUST00000199188	retained_intron		3	1	121426545	2214
ENSMUSG00000027959	protein_coding	Sass6	ENSMUST00000197063	retained_intron		3	1	116621459	539
ENSMUSG00000053931	protein_coding	Cnn3	ENSMUST00000197135	protein_coding		3	1	121426770	1242
ENSMUSG00000027959	protein_coding	Sass6	ENSMUST00000198747	retained_intron		3	1	116625923	1765
ENSMUSG00000020691	protein_coding	Mettl2	ENSMUST00000136214	processed_transcript		11	1	105126479	2556
ENSMUSG00000024472	protein_coding	Dcp2	ENSMUST00000025350	protein_coding	principal1	18	1	44380527	8616
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000114541	protein_coding		1	-1	51907316	4616
ENSMUSG00000020691	protein_coding	Mettl2	ENSMUST00000132185	processed_transcript		11	1	105132449	726
ENSMUSG00000020691	protein_coding	Mettl2	ENSMUST00000129012	processed_transcript		11	1	105132460	440
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229746	protein_coding		15	1	102473502	786
ENSMUSG00000053931	protein_coding	Cnn3	ENSMUST00000198649	processed_transcript		3	1	121427282	395
ENSMUSG00000078289	processed_pseudogene	Gm10923	ENSMUST00000105085	processed_pseudogene		15	1	85116870	418
ENSMUSG00000032640	protein_coding	Chsy1	ENSMUST00000036372	protein_coding	principal1	7	1	66109515	4176
ENSMUSG00000020691	protein_coding	Mettl2	ENSMUST00000155460	processed_transcript		11	1	105137563	1056
ENSMUSG00000033671	protein_coding	Cep350	ENSMUST00000138762	protein_coding	principal1	1	-1	155973255	13307
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230211	protein_coding		15	1	102473539	704
ENSMUSG00000053931	protein_coding	Cnn3	ENSMUST00000198393	protein_coding		3	1	121449766	836
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230539	protein_coding		15	1	102473541	690
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229219	protein_coding		15	1	102474145	759
ENSMUSG00000097634	antisense	Gm26827	ENSMUST00000181911	antisense		7	-1	66173121	148
ENSMUSG00000001847	protein_coding	Rac1	ENSMUST00000080537	protein_coding	principal3	5	-1	143528036	4159
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230577	protein_coding		15	1	102474247	792
ENSMUSG00000102819	TEC	Gm37817	ENSMUST00000195276	TEC		4	-1	119295461	434
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230918	protein_coding		15	1	102474247	693
ENSMUSG00000108686	processed_pseudogene	Gm45080	ENSMUST00000206648	processed_pseudogene		7	1	66190555	283
ENSMUSG00000033671	protein_coding	Cep350	ENSMUST00000132189	processed_transcript		1	-1	155861373	1089
ENSMUSG00000053931	protein_coding	Cnn3	ENSMUST00000196671	retained_intron		3	1	121451005	1053
ENSMUSG00000033671	protein_coding	Cep350	ENSMUST00000129865	protein_coding		1	-1	155894597	1346
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229533	protein_coding		15	1	102474616	674
ENSMUSG00000053931	protein_coding	Cnn3	ENSMUST00000198620	protein_coding		3	1	121457084	481
ENSMUSG00000036879	protein_coding	Phkb	ENSMUST00000160611	nonsense_mediated_decay		8	1	85840991	1971
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000018561	protein_coding	alternative1	1	-1	51915928	4767
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230682	protein_coding		15	1	102478618	575
ENSMUSG00000053931	protein_coding	Cnn3	ENSMUST00000199499	protein_coding		3	1	121457113	261
ENSMUSG00000033671	protein_coding	Cep350	ENSMUST00000146987	processed_transcript		1	-1	155886014	534
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000231085	protein_coding		15	1	102478637	915
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000145367	retained_intron		1	-1	51764470	765
ENSMUSG00000001847	protein_coding	Rac1	ENSMUST00000100489	protein_coding	alternative1	5	-1	143527993	2325
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229432	protein_coding		15	1	102483198	553
ENSMUSG00000033671	protein_coding	Cep350	ENSMUST00000124495	protein_coding		1	-1	155972890	1334
ENSMUSG00000053199	protein_coding	Arhgap20	ENSMUST00000130405	protein_coding	alternative2	9	1	51765660	3881
ENSMUSG00000040430	protein_coding	Pitpnc1	ENSMUST00000040380	protein_coding		11	-1	107337637	5478
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229061	protein_coding		15	1	102484154	669
ENSMUSG00000033671	protein_coding	Cep350	ENSMUST00000192899	retained_intron		1	-1	155973184	3207
ENSMUSG00000102837	TEC	Gm37383	ENSMUST00000191750	TEC		1	-1	155882546	745
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000229822	processed_transcript		15	1	102485858	2048
ENSMUSG00000103717	processed_pseudogene	Gm38038	ENSMUST00000193803	processed_pseudogene		1	1	155855449	259
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230282	retained_intron		15	1	102485884	427
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000140731	processed_transcript		1	-1	51770879	448
ENSMUSG00000102558	antisense	Gm37571	ENSMUST00000195048	antisense		1	1	155818494	614
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230997	retained_intron		15	1	102485979	909
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000140930	retained_intron		1	-1	51767392	683
ENSMUSG00000001847	protein_coding	Rac1	ENSMUST00000145709	processed_transcript		5	-1	143518182	585
ENSMUSG00000056851	protein_coding	Pcbp2	ENSMUST00000230631	retained_intron		15	1	102489521	585
ENSMUSG00000001847	protein_coding	Rac1	ENSMUST00000131513	processed_transcript		5	-1	143517608	344
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000136273	processed_transcript		1	-1	51776436	666
ENSMUSG00000105198	TEC	Gm42502	ENSMUST00000198550	TEC		5	1	143525660	1089
ENSMUSG00000053199	protein_coding	Arhgap20	ENSMUST00000065496	protein_coding	principal2	9	1	51765352	7161
ENSMUSG00000102483	protein_coding	Catspere1	ENSMUST00000194528	protein_coding	principal1	1	1	177808431	3435
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000136701	processed_transcript		1	-1	51795225	969
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000126952	retained_intron		1	-1	51782204	282
ENSMUSG00000040430	protein_coding	Pitpnc1	ENSMUST00000103064	protein_coding	principal1	11	-1	107470699	6329
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000113767	protein_coding	alternative1	2	1	29889720	2249
ENSMUSG00000053199	protein_coding	Arhgap20	ENSMUST00000146509	retained_intron		9	1	51765345	1458
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000144694	protein_coding		1	-1	51896301	1244
ENSMUSG00000040430	protein_coding	Pitpnc1	ENSMUST00000134763	protein_coding		11	-1	107348130	650
ENSMUSG00000053199	protein_coding	Arhgap20	ENSMUST00000124907	retained_intron		9	1	51765337	4789
ENSMUSG00000015599	protein_coding	Ttbk1	ENSMUST00000047034	protein_coding	principal2	17	-1	46487675	6959
ENSMUSG00000040430	protein_coding	Pitpnc1	ENSMUST00000146680	processed_transcript		11	-1	107337526	376
ENSMUSG00000085245	antisense	Gm11713	ENSMUST00000139941	antisense		11	1	107410390	523
ENSMUSG00000047728	protein_coding	Ly6g2	ENSMUST00000185307	protein_coding	principal5	15	1	75216376	758
ENSMUSG00000053199	protein_coding	Arhgap20	ENSMUST00000126567	processed_transcript		9	1	51816013	729
ENSMUSG00000047728	protein_coding	Ly6g2	ENSMUST00000229521	protein_coding	principal5	15	1	75216378	1498
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000135125	processed_transcript		1	-1	51820546	354
ENSMUSG00000027577	protein_coding	Chrna4	ENSMUST00000108851	protein_coding	alternative2	2	-1	181039075	2071
ENSMUSG00000053199	protein_coding	Arhgap20	ENSMUST00000149754	processed_transcript		9	1	51831772	775
ENSMUSG00000015599	protein_coding	Ttbk1	ENSMUST00000225808	protein_coding	alternative2	17	-1	46484295	8926
ENSMUSG00000047728	protein_coding	Ly6g2	ENSMUST00000055719	protein_coding	alternative2	15	1	75216596	1470
ENSMUSG00000027577	protein_coding	Chrna4	ENSMUST00000198922	protein_coding		2	-1	181028328	519
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000151525	retained_intron		1	-1	51915912	3045
ENSMUSG00000015599	protein_coding	Ttbk1	ENSMUST00000223818	nonsense_mediated_decay		17	-1	46484209	430
ENSMUSG00000084396	processed_pseudogene	Gm14657	ENSMUST00000117461	processed_pseudogene		X	-1	63355648	302
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000123299	processed_transcript		1	-1	51851106	280
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000113763	protein_coding	principal3	2	1	29889785	2364
ENSMUSG00000018417	protein_coding	Myo1b	ENSMUST00000126657	retained_intron		1	-1	51915921	1558
ENSMUSG00000031934	protein_coding	Panx1	ENSMUST00000164273	protein_coding	principal1	9	-1	15045478	5732
ENSMUSG00000101724	sense_intronic	Gm29453	ENSMUST00000186428	sense_intronic		1	-1	51849118	1279
ENSMUSG00000100313	sense_intronic	Gm28323	ENSMUST00000186817	sense_intronic		1	-1	51879608	2499
ENSMUSG00000031934	protein_coding	Panx1	ENSMUST00000056755	nonsense_mediated_decay		9	-1	15045478	1854
ENSMUSG00000072762	protein_coding	4930522L14Rik	ENSMUST00000112547	protein_coding	principal1	5	-1	109751597	2001
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000102591	protein_coding	principal1	4	1	129600680	1437
ENSMUSG00000031934	protein_coding	Panx1	ENSMUST00000166933	retained_intron		9	-1	15010508	575
ENSMUSG00000027577	protein_coding	Chrna4	ENSMUST00000067120	protein_coding	principal2	2	-1	181039305	4565
ENSMUSG00000031934	protein_coding	Panx1	ENSMUST00000169288	protein_coding		9	-1	15043797	357
ENSMUSG00000072762	protein_coding	4930522L14Rik	ENSMUST00000100937	protein_coding		5	-1	109751886	599
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000181579	protein_coding		4	1	129600681	449
ENSMUSG00000049477	processed_pseudogene	Gm8508	ENSMUST00000061226	processed_pseudogene		5	-1	109757887	363
ENSMUSG00000027577	protein_coding	Chrna4	ENSMUST00000135766	processed_transcript		2	-1	181039225	712
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000151969	nonsense_mediated_decay		4	1	129600687	875
ENSMUSG00000027577	protein_coding	Chrna4	ENSMUST00000124400	protein_coding		2	-1	181043546	363
ENSMUSG00000105471	lincRNA	A430073D23Rik	ENSMUST00000196262	lincRNA		5	-1	109796298	665
ENSMUSG00000105044	TEC	Gm10416	ENSMUST00000197379	TEC		5	-1	109834145	645
ENSMUSG00000022123	protein_coding	Scel	ENSMUST00000227322	protein_coding	alternative2	14	1	103513342	2443
ENSMUSG00000060600	protein_coding	Eno3	ENSMUST00000157027	protein_coding		11	1	70657202	670
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000173758	protein_coding		4	1	129600691	453
ENSMUSG00000022432	protein_coding	Smc1b	ENSMUST00000023068	protein_coding	principal1	15	-1	85131964	4047
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000181134	lincRNA		3	1	88206813	2203
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000173937	nonsense_mediated_decay		4	1	129600691	756
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000065976	protein_coding	alternative2	X	-1	111463043	3867
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000174073	nonsense_mediated_decay		4	1	129600691	686
ENSMUSG00000022123	protein_coding	Scel	ENSMUST00000095576	protein_coding	principal2	14	1	103513421	2424
ENSMUSG00000024041	protein_coding	Cryaa	ENSMUST00000228716	protein_coding	principal1	17	1	31677807	1254
ENSMUSG00000022432	protein_coding	Smc1b	ENSMUST00000227591	nonsense_mediated_decay		15	-1	85090915	336
ENSMUSG00000020330	protein_coding	Hmmr	ENSMUST00000020579	protein_coding	principal1	11	-1	40733422	3892
ENSMUSG00000039206	protein_coding	Daglb	ENSMUST00000045593	protein_coding	principal1	5	1	143464584	4651
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000174819	nonsense_mediated_decay		4	1	129600695	652
ENSMUSG00000039206	protein_coding	Daglb	ENSMUST00000174273	retained_intron		5	1	143464613	2712
ENSMUSG00000039206	protein_coding	Daglb	ENSMUST00000199577	retained_intron		5	1	143472917	4877
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000096348	protein_coding	alternative2	X	-1	111463195	4151
ENSMUSG00000039206	protein_coding	Daglb	ENSMUST00000155383	retained_intron		5	1	143486678	622
ENSMUSG00000025287	protein_coding	Acot9	ENSMUST00000134662	processed_transcript		X	1	155262443	447
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000152126	nonsense_mediated_decay		4	1	129600700	1519
ENSMUSG00000024041	protein_coding	Cryaa	ENSMUST00000019192	protein_coding		17	1	31677860	1266
ENSMUSG00000115651	processed_pseudogene	Gm7595	ENSMUST00000228166	processed_pseudogene		15	1	55973605	901
ENSMUSG00000020330	protein_coding	Hmmr	ENSMUST00000156399	processed_transcript		11	-1	40733416	1443
ENSMUSG00000115187	processed_pseudogene	Gm49210	ENSMUST00000227248	processed_pseudogene		15	1	55976162	302
ENSMUSG00000020330	protein_coding	Hmmr	ENSMUST00000127705	processed_transcript		11	-1	40733416	1080
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000150110	nonsense_mediated_decay		4	1	129600701	418
ENSMUSG00000115361	lincRNA	Gm49211	ENSMUST00000226266	lincRNA		15	1	56004044	365
ENSMUSG00000115678	lincRNA	Gm49212	ENSMUST00000228202	lincRNA		15	-1	56049832	259
ENSMUSG00000020330	protein_coding	Hmmr	ENSMUST00000152749	processed_transcript		11	-1	40733391	547
ENSMUSG00000024041	protein_coding	Cryaa	ENSMUST00000227620	retained_intron		17	1	31677948	490
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000174350	retained_intron		4	1	129600702	1124
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000113428	protein_coding	alternative2	X	-1	111463195	4135
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000181550	lincRNA		3	1	88206826	1093
ENSMUSG00000024041	protein_coding	Cryaa	ENSMUST00000228089	protein_coding		17	1	31677948	952
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000137712	protein_coding	alternative2	X	-1	111463105	2410
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000135628	nonsense_mediated_decay		4	1	129600703	669
ENSMUSG00000024041	protein_coding	Cryaa	ENSMUST00000226183	retained_intron		17	1	31677990	818
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000180582	lincRNA		3	1	88207312	440
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000138645	protein_coding		X	-1	111486761	486
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000173507	processed_transcript		4	1	129600704	428
ENSMUSG00000022022	protein_coding	Mtrf1	ENSMUST00000022600	protein_coding	principal1	14	1	79397772	1799
ENSMUSG00000024041	protein_coding	Cryaa	ENSMUST00000228305	retained_intron		17	1	31679480	722
ENSMUSG00000117987	antisense	Gm50222	ENSMUST00000236145	antisense		17	-1	31682817	1413
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000181636	lincRNA		3	1	88209472	451
ENSMUSG00000117987	antisense	Gm50222	ENSMUST00000237479	antisense		17	-1	31684374	651
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000127919	nonsense_mediated_decay		4	1	129600707	400
ENSMUSG00000101389	protein_coding	Ms4a4a	ENSMUST00000188995	protein_coding	principal1	19	1	11375523	836
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000181356	lincRNA		3	1	88214485	1088
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000174610	nonsense_mediated_decay		4	1	129600983	541
ENSMUSG00000004677	protein_coding	Myo9b	ENSMUST00000212935	protein_coding	alternative2	8	1	71272714	6316
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000145345	nonsense_mediated_decay		4	1	129600983	769
ENSMUSG00000036879	protein_coding	Phkb	ENSMUST00000053771	protein_coding	principal1	8	1	85841002	5351
ENSMUSG00000085633	antisense	Bloc1s6os	ENSMUST00000150154	antisense		2	-1	122738362	696
ENSMUSG00000022022	protein_coding	Mtrf1	ENSMUST00000227610	retained_intron		14	1	79397986	2008
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000181396	lincRNA		3	1	88214495	711
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000123213	protein_coding		X	-1	111463455	798
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000173728	retained_intron		4	1	129601088	391
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000181622	lincRNA		3	1	88222664	426
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000144304	retained_intron		4	1	129601192	861
ENSMUSG00000036879	protein_coding	Phkb	ENSMUST00000159882	processed_transcript		8	1	85841008	1013
ENSMUSG00000028797	protein_coding	Tmem234	ENSMUST00000172635	retained_intron		4	1	129602010	496
ENSMUSG00000036879	protein_coding	Phkb	ENSMUST00000161850	protein_coding		8	1	85841016	630
ENSMUSG00000036879	protein_coding	Phkb	ENSMUST00000162464	protein_coding		8	1	85842787	763
ENSMUSG00000024675	protein_coding	Ms4a4c	ENSMUST00000153546	protein_coding		19	1	11404770	361
ENSMUSG00000036879	protein_coding	Phkb	ENSMUST00000162981	nonsense_mediated_decay		8	1	85843051	451
ENSMUSG00000087458	antisense	Gm13999	ENSMUST00000141511	antisense		2	-1	120027453	969
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000180635	lincRNA		3	1	88224280	1191
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000180984	lincRNA		3	1	88225933	759
ENSMUSG00000036879	protein_coding	Phkb	ENSMUST00000160731	protein_coding		8	1	86017432	1257
ENSMUSG00000091866	processed_pseudogene	Gm6257	ENSMUST00000163864	processed_pseudogene		9	-1	63444075	910
ENSMUSG00000004677	protein_coding	Myo9b	ENSMUST00000071935	protein_coding	principal3	8	1	71272734	7082
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000041524	protein_coding	principal1	3	-1	116614587	3402
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000180478	lincRNA		3	1	88228568	573
ENSMUSG00000097156	lincRNA	Gm3764	ENSMUST00000181361	lincRNA		3	1	88228783	858
ENSMUSG00000036879	protein_coding	Phkb	ENSMUST00000162305	processed_transcript		8	1	86035646	1950
ENSMUSG00000090043	processed_pseudogene	Gm16167	ENSMUST00000160428	processed_pseudogene		8	-1	85854437	1065
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000184963	nonsense_mediated_decay		3	-1	116594836	1616
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182905	nonsense_mediated_decay		14	1	51984833	5320
ENSMUSG00000060600	protein_coding	Eno3	ENSMUST00000072841	protein_coding	principal1	11	1	70657202	1454
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000128819	protein_coding		X	-1	111531176	701
ENSMUSG00000086539	processed_transcript	Gm16759	ENSMUST00000191455	lincRNA		9	1	63398601	4272
ENSMUSG00000113594	processed_pseudogene	Gm4052	ENSMUST00000220890	processed_pseudogene		13	1	72350221	451
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000052999	protein_coding	principal1	4	1	108165437	1307
ENSMUSG00000034311	protein_coding	Kif4	ENSMUST00000048962	protein_coding	principal1	X	1	100625737	4983
ENSMUSG00000113172	TEC	Gm47836	ENSMUST00000222760	TEC		13	-1	72371647	4322
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000123102	nonsense_mediated_decay		X	-1	111462639	447
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000132319	protein_coding		X	-1	111537947	644
ENSMUSG00000086539	processed_transcript	Gm16759	ENSMUST00000126238	lincRNA		9	1	63399374	1393
ENSMUSG00000040795	protein_coding	Iqcc	ENSMUST00000046675	protein_coding	principal2	4	-1	129619099	2639
ENSMUSG00000086539	processed_transcript	Gm16759	ENSMUST00000187259	lincRNA		9	1	63399381	373
ENSMUSG00000034311	protein_coding	Kif4	ENSMUST00000156386	retained_intron		X	1	100633960	694
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000123951	protein_coding		X	-1	111537959	639
ENSMUSG00000004677	protein_coding	Myo9b	ENSMUST00000168839	protein_coding	alternative2	8	1	71272755	7102
ENSMUSG00000042750	protein_coding	Bex2	ENSMUST00000049130	protein_coding	principal1	X	-1	136068236	903
ENSMUSG00000086539	processed_transcript	Gm16759	ENSMUST00000168682	processed_transcript		9	1	63531352	427
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000183638	nonsense_mediated_decay		3	-1	116594860	1723
ENSMUSG00000040795	protein_coding	Iqcc	ENSMUST00000127029	processed_transcript		4	-1	129617033	402
ENSMUSG00000060600	protein_coding	Eno3	ENSMUST00000108548	protein_coding	principal1	11	1	70657204	1564
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000156639	protein_coding		X	-1	111536342	507
ENSMUSG00000040562	protein_coding	Gstm2	ENSMUST00000012348	protein_coding	principal1	3	-1	107986453	1064
ENSMUSG00000034311	protein_coding	Kif4	ENSMUST00000145319	processed_transcript		X	1	100712127	709
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000199439	processed_transcript		3	-1	116583476	865
ENSMUSG00000055602	protein_coding	Tcp10b	ENSMUST00000086787	protein_coding	principal1	17	1	13061104	2327
ENSMUSG00000040795	protein_coding	Iqcc	ENSMUST00000131559	retained_intron		4	-1	129619076	717
ENSMUSG00000004677	protein_coding	Myo9b	ENSMUST00000212173	processed_transcript		8	1	71333817	289
ENSMUSG00000025665	protein_coding	Rps6ka6	ENSMUST00000082034	protein_coding	principal2	X	-1	111486782	4170
ENSMUSG00000060600	protein_coding	Eno3	ENSMUST00000126241	protein_coding		11	1	70657285	363
ENSMUSG00000040795	protein_coding	Iqcc	ENSMUST00000121442	protein_coding	alternative2	4	-1	129619096	491
ENSMUSG00000060600	protein_coding	Eno3	ENSMUST00000134087	protein_coding		11	1	70657687	427
ENSMUSG00000004677	protein_coding	Myo9b	ENSMUST00000212412	protein_coding		8	1	71348778	3614
ENSMUSG00000040795	protein_coding	Iqcc	ENSMUST00000146378	processed_transcript		4	-1	129619080	460
ENSMUSG00000040562	protein_coding	Gstm2	ENSMUST00000066530	protein_coding		3	-1	107986360	854
ENSMUSG00000060600	protein_coding	Eno3	ENSMUST00000179738	retained_intron		11	1	70658339	498
ENSMUSG00000004677	protein_coding	Myo9b	ENSMUST00000170242	protein_coding	alternative2	8	1	71272714	7297
ENSMUSG00000025287	protein_coding	Acot9	ENSMUST00000026324	protein_coding	principal1	X	1	155262443	1752
ENSMUSG00000060600	protein_coding	Eno3	ENSMUST00000179055	protein_coding		11	1	70660773	568
ENSMUSG00000024675	protein_coding	Ms4a4c	ENSMUST00000072729	protein_coding	principal1	19	1	11407661	1723
ENSMUSG00000015668	protein_coding	Pdzd11	ENSMUST00000144643	retained_intron		X	-1	100625938	1497
ENSMUSG00000055602	protein_coding	Tcp10b	ENSMUST00000116666	protein_coding	principal1	17	1	13061124	2588
ENSMUSG00000040562	protein_coding	Gstm2	ENSMUST00000140420	retained_intron		3	-1	107986421	727
ENSMUSG00000060600	protein_coding	Eno3	ENSMUST00000170716	protein_coding	principal1	11	1	70657796	1461
ENSMUSG00000040562	protein_coding	Gstm2	ENSMUST00000150808	retained_intron		3	-1	107986421	692
ENSMUSG00000055602	protein_coding	Tcp10b	ENSMUST00000232990	protein_coding		17	1	13061180	1852
ENSMUSG00000083346	processed_pseudogene	Gm8260	ENSMUST00000119230	processed_pseudogene		X	-1	64047906	353
ENSMUSG00000024675	protein_coding	Ms4a4c	ENSMUST00000119366	protein_coding		19	1	11414841	687
ENSMUSG00000101024	processed_pseudogene	Gm5692	ENSMUST00000187254	processed_pseudogene		19	-1	11405004	1057
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000156161	retained_intron		3	-1	116594887	1991
ENSMUSG00000035439	protein_coding	Haus8	ENSMUST00000134361	processed_transcript		8	-1	71272478	470
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000197190	protein_coding		3	-1	116594685	538
ENSMUSG00000107986	unprocessed_pseudogene	Olfr454-ps1	ENSMUST00000205206	unprocessed_pseudogene		6	1	42721916	348
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000134761	nonsense_mediated_decay		3	-1	116594668	459
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000124807	retained_intron		3	-1	116594801	686
ENSMUSG00000079579	protein_coding	Gm6760	ENSMUST00000114682	protein_coding	principal1	X	-1	64152198	604
ENSMUSG00000035439	protein_coding	Haus8	ENSMUST00000144726	retained_intron		8	-1	71272442	659
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000198454	protein_coding		3	-1	116594838	880
ENSMUSG00000090362	protein_coding	Vmn2r79	ENSMUST00000233714	protein_coding		7	1	86996115	5417
ENSMUSG00000055602	protein_coding	Tcp10b	ENSMUST00000233511	protein_coding		17	1	13061324	653
ENSMUSG00000034361	protein_coding	Cpne2	ENSMUST00000048653	protein_coding	principal2	8	1	94532990	2342
ENSMUSG00000035439	protein_coding	Haus8	ENSMUST00000128833	processed_transcript		8	-1	71272358	471
ENSMUSG00000090362	protein_coding	Vmn2r79	ENSMUST00000233648	protein_coding		7	1	86996115	5399
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000126546	processed_transcript		3	-1	116614121	291
ENSMUSG00000025287	protein_coding	Acot9	ENSMUST00000131332	nonsense_mediated_decay		X	1	155262505	1740
ENSMUSG00000055602	protein_coding	Tcp10b	ENSMUST00000163227	protein_coding		17	1	13061846	1465
ENSMUSG00000035439	protein_coding	Haus8	ENSMUST00000129455	retained_intron		8	-1	71256653	278
ENSMUSG00000033439	protein_coding	Trmt13	ENSMUST00000198103	retained_intron		3	-1	116614408	869
ENSMUSG00000025287	protein_coding	Acot9	ENSMUST00000126200	retained_intron		X	1	155293843	844
ENSMUSG00000090362	protein_coding	Vmn2r79	ENSMUST00000164462	protein_coding	principal2	7	1	86996115	9879
ENSMUSG00000106025	TEC	Gm42940	ENSMUST00000200361	TEC		3	-1	116574424	2362
ENSMUSG00000035439	protein_coding	Haus8	ENSMUST00000157039	processed_transcript		8	-1	71272460	644
ENSMUSG00000034361	protein_coding	Cpne2	ENSMUST00000156894	retained_intron		8	1	94533039	655
ENSMUSG00000055602	protein_coding	Tcp10b	ENSMUST00000233962	retained_intron		17	1	13070902	499
ENSMUSG00000090362	protein_coding	Vmn2r79	ENSMUST00000233048	retained_intron		7	1	86996115	10586
ENSMUSG00000090362	protein_coding	Vmn2r79	ENSMUST00000233730	protein_coding	alternative2	7	1	86996115	9861
ENSMUSG00000090362	protein_coding	Vmn2r79	ENSMUST00000232908	nonsense_mediated_decay		7	1	86996115	10141
ENSMUSG00000115335	lincRNA	Gm41279	ENSMUST00000227975	lincRNA		15	-1	26062438	670
ENSMUSG00000034361	protein_coding	Cpne2	ENSMUST00000136550	processed_transcript		8	1	94533067	833
ENSMUSG00000040658	protein_coding	Dnph1	ENSMUST00000046497	protein_coding	principal1	17	1	46496711	1190
ENSMUSG00000034361	protein_coding	Cpne2	ENSMUST00000109537	protein_coding	alternative1	8	1	94533067	2121
ENSMUSG00000084791	lincRNA	Gm13667	ENSMUST00000132332	lincRNA		2	1	74135757	617
ENSMUSG00000100108	lincRNA	Gm28100	ENSMUST00000186560	lincRNA		1	-1	85986917	582
ENSMUSG00000050089	protein_coding	Akap4	ENSMUST00000057101	protein_coding	principal4	X	1	7067519	2851
ENSMUSG00000099342	processed_pseudogene	Gm18180	ENSMUST00000187562	processed_pseudogene		1	-1	86015886	1484
ENSMUSG00000109334	TEC	Gm44925	ENSMUST00000208879	TEC		7	1	87118867	2110
ENSMUSG00000027961	protein_coding	Lrrc39	ENSMUST00000203327	retained_intron		3	1	116562973	2880
ENSMUSG00000034361	protein_coding	Cpne2	ENSMUST00000212550	nonsense_mediated_decay		8	1	94555514	388
ENSMUSG00000050089	protein_coding	Akap4	ENSMUST00000115750	protein_coding	alternative2	X	1	7067520	3021
ENSMUSG00000034361	protein_coding	Cpne2	ENSMUST00000156377	retained_intron		8	1	94562650	655
ENSMUSG00000039345	protein_coding	Mettl22	ENSMUST00000046470	protein_coding	principal1	16	1	8470788	1825
ENSMUSG00000085405	lincRNA	4930441J16Rik	ENSMUST00000153743	lincRNA		2	-1	74307717	516
ENSMUSG00000050089	protein_coding	Akap4	ENSMUST00000115751	protein_coding	alternative2	X	1	7068213	2838
ENSMUSG00000015668	protein_coding	Pdzd11	ENSMUST00000015812	protein_coding	principal1	X	-1	100626568	1626
ENSMUSG00000039345	protein_coding	Mettl22	ENSMUST00000150790	protein_coding		16	1	8470791	554
ENSMUSG00000039345	protein_coding	Mettl22	ENSMUST00000229757	retained_intron		16	1	8470795	3310
ENSMUSG00000108816	processed_pseudogene	Gm6230	ENSMUST00000208077	processed_pseudogene		7	-1	87242885	780
ENSMUSG00000022431	protein_coding	Ribc2	ENSMUST00000023067	protein_coding	principal1	15	1	85132078	1674
ENSMUSG00000039345	protein_coding	Mettl22	ENSMUST00000142899	protein_coding		16	1	8470804	681
ENSMUSG00000022476	protein_coding	Polr3h	ENSMUST00000230669	processed_transcript		15	-1	81926164	3030
ENSMUSG00000079183	lincRNA	C030005K15Rik	ENSMUST00000166373	lincRNA		10	-1	97726755	1882
ENSMUSG00000022476	protein_coding	Polr3h	ENSMUST00000230066	processed_transcript		15	-1	81915129	438
ENSMUSG00000022431	protein_coding	Ribc2	ENSMUST00000229238	nonsense_mediated_decay		15	1	85132103	1417
ENSMUSG00000015668	protein_coding	Pdzd11	ENSMUST00000059099	protein_coding	principal1	X	-1	100625935	1041
ENSMUSG00000039345	protein_coding	Mettl22	ENSMUST00000151233	retained_intron		16	1	8485566	668
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000207010	protein_coding	alternative2	7	-1	123369851	3168
ENSMUSG00000074776	lincRNA	Gm10754	ENSMUST00000220233	lincRNA		10	-1	97967090	1633
ENSMUSG00000074776	lincRNA	Gm10754	ENSMUST00000099324	lincRNA		10	-1	97682416	315
ENSMUSG00000115924	lincRNA	Gm19277	ENSMUST00000229478	lincRNA		15	-1	85156132	1165
ENSMUSG00000039345	protein_coding	Mettl22	ENSMUST00000133208	retained_intron		16	1	8486834	892
ENSMUSG00000052157	processed_pseudogene	Gm650	ENSMUST00000144428	processed_pseudogene		X	-1	155305749	1551
ENSMUSG00000015668	protein_coding	Pdzd11	ENSMUST00000151548	processed_transcript		X	-1	100626271	813
ENSMUSG00000094989	processed_pseudogene	Rpl9-ps4	ENSMUST00000075549	processed_pseudogene		13	-1	72455340	579
ENSMUSG00000027513	protein_coding	Pck1	ENSMUST00000029017	protein_coding	principal1	2	1	173153048	2661
ENSMUSG00000029060	protein_coding	Mib2	ENSMUST00000103176	protein_coding	principal1	4	-1	155669198	3642
ENSMUSG00000113375	TEC	Gm47838	ENSMUST00000223278	TEC		13	1	72467977	3827
ENSMUSG00000113858	processed_pseudogene	Gm4057	ENSMUST00000221407	processed_pseudogene		13	-1	72472569	368
ENSMUSG00000027513	protein_coding	Pck1	ENSMUST00000151269	retained_intron		2	1	173153073	1211
ENSMUSG00000029060	protein_coding	Mib2	ENSMUST00000139788	processed_transcript		4	-1	155656727	1558
ENSMUSG00000029060	protein_coding	Mib2	ENSMUST00000139134	processed_transcript		4	-1	155656727	677
ENSMUSG00000031179	protein_coding	3830417A13Rik	ENSMUST00000033522	protein_coding	principal1	X	1	64173548	1649
ENSMUSG00000027513	protein_coding	Pck1	ENSMUST00000136885	retained_intron		2	1	173153082	2728
ENSMUSG00000029060	protein_coding	Mib2	ENSMUST00000141108	protein_coding		4	-1	155659583	1125
ENSMUSG00000027513	protein_coding	Pck1	ENSMUST00000150629	processed_transcript		2	1	173153073	734
ENSMUSG00000031889	protein_coding	D230025D16Rik	ENSMUST00000034361	protein_coding	principal1	8	1	105225145	2916
ENSMUSG00000093587	lincRNA	Gm20554	ENSMUST00000177421	lincRNA		13	-1	72628564	2352
ENSMUSG00000027961	protein_coding	Lrrc39	ENSMUST00000029573	protein_coding	principal1	3	1	116562978	3087
ENSMUSG00000029060	protein_coding	Mib2	ENSMUST00000130237	processed_transcript		4	-1	155658339	622
ENSMUSG00000031179	protein_coding	3830417A13Rik	ENSMUST00000151996	protein_coding		X	1	64174348	352
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000130942	nonsense_mediated_decay		4	1	108165466	1319
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000174135	processed_transcript		15	1	65787034	1425
ENSMUSG00000106415	antisense	Gm42893	ENSMUST00000198035	antisense		3	-1	116630984	1502
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000106442	protein_coding	principal4	7	-1	123369886	3336
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000125647	nonsense_mediated_decay		4	1	108165488	1186
ENSMUSG00000029060	protein_coding	Mib2	ENSMUST00000155189	processed_transcript		4	-1	155669197	751
ENSMUSG00000115979	TEC	Gm49410	ENSMUST00000230156	TEC		15	1	77740761	3130
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000116307	protein_coding		4	1	108165518	893
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000098060	protein_coding	alternative2	7	-1	123369886	3102
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000135718	protein_coding		4	1	108169715	556
ENSMUSG00000105514	TEC	Gm42913	ENSMUST00000197936	TEC		5	1	114115829	1853
ENSMUSG00000029060	protein_coding	Mib2	ENSMUST00000139289	processed_transcript		4	-1	155669193	470
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000138701	retained_intron		4	1	108169787	499
ENSMUSG00000102920	unprocessed_pseudogene	Olfr416-ps1	ENSMUST00000192734	unprocessed_pseudogene		1	1	174374547	804
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000133049	processed_transcript		4	1	108170143	1150
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000167309	protein_coding	alternative2	7	-1	123369878	3372
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000123280	processed_transcript		4	1	108170154	439
ENSMUSG00000022476	protein_coding	Polr3h	ENSMUST00000023113	protein_coding	principal1	15	-1	81926240	2542
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000126900	nonsense_mediated_decay		4	1	108172160	728
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000150487	retained_intron		4	1	108172663	582
ENSMUSG00000022476	protein_coding	Polr3h	ENSMUST00000230050	protein_coding		15	-1	81925922	765
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000127392	retained_intron		4	1	108173690	737
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000106691	protein_coding		4	1	108173810	463
ENSMUSG00000022476	protein_coding	Polr3h	ENSMUST00000230765	processed_transcript		15	-1	81925971	1290
ENSMUSG00000028601	protein_coding	Echdc2	ENSMUST00000116309	protein_coding	principal1	4	1	108165466	1238
ENSMUSG00000022476	protein_coding	Polr3h	ENSMUST00000230842	processed_transcript		15	-1	81925396	498
ENSMUSG00000025932	protein_coding	Eya1	ENSMUST00000168081	protein_coding		1	-1	14310235	4366
ENSMUSG00000113081	transcribed_processed_pseudogene	Gm3333	ENSMUST00000221637	processed_transcript		13	1	62263566	452
ENSMUSG00000113081	transcribed_processed_pseudogene	Gm3333	ENSMUST00000221763	transcribed_processed_pseudogene		13	1	62272761	1044
ENSMUSG00000022476	protein_coding	Polr3h	ENSMUST00000229402	retained_intron		15	-1	81926170	985
ENSMUSG00000022178	protein_coding	Ajuba	ENSMUST00000054487	protein_coding	principal1	14	-1	54577558	3397
ENSMUSG00000085673	antisense	Gm16122	ENSMUST00000142625	antisense		5	1	140074105	1158
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000206117	nonsense_mediated_decay		7	-1	123369903	3311
ENSMUSG00000019936	protein_coding	Epyc	ENSMUST00000020094	protein_coding	principal1	10	1	97644068	1723
ENSMUSG00000044339	protein_coding	Alkbh2	ENSMUST00000053657	protein_coding	principal1	5	-1	114128176	1073
ENSMUSG00000022178	protein_coding	Ajuba	ENSMUST00000226463	retained_intron		14	-1	54572082	2214
ENSMUSG00000106614	processed_pseudogene	Gm43746	ENSMUST00000200028	processed_pseudogene		3	-1	107999845	317
ENSMUSG00000035439	protein_coding	Haus8	ENSMUST00000035960	protein_coding	alternative2	8	-1	71272934	2013
ENSMUSG00000044339	protein_coding	Alkbh2	ENSMUST00000112279	protein_coding	principal1	5	-1	114128218	899
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000205262	protein_coding	alternative2	7	-1	123369885	3036
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000035645	protein_coding	principal1	4	1	43381979	5300
ENSMUSG00000087248	antisense	Gm16120	ENSMUST00000127990	antisense		5	1	140207385	808
ENSMUSG00000019936	protein_coding	Epyc	ENSMUST00000105285	protein_coding	principal1	10	1	97647089	2539
ENSMUSG00000087248	antisense	Gm16120	ENSMUST00000133999	antisense		5	1	140209542	453
ENSMUSG00000044339	protein_coding	Alkbh2	ENSMUST00000149418	protein_coding		5	-1	114128181	385
ENSMUSG00000105453	TEC	Gm43702	ENSMUST00000198772	TEC		5	-1	140032176	2546
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000206803	retained_intron		7	-1	123286241	3305
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000205785	retained_intron		7	-1	123296590	613
ENSMUSG00000025289	protein_coding	Prdx4	ENSMUST00000026328	protein_coding	principal1	X	-1	155338467	990
ENSMUSG00000087606	antisense	Gm16121	ENSMUST00000128520	antisense		5	1	140101199	2253
ENSMUSG00000029592	protein_coding	Usp30	ENSMUST00000162506	processed_transcript		5	1	114065461	588
ENSMUSG00000047025	protein_coding	Ccer1	ENSMUST00000060703	protein_coding	principal1	10	1	97693059	1865
ENSMUSG00000035439	protein_coding	Haus8	ENSMUST00000110071	protein_coding	principal3	8	-1	71272376	1452
ENSMUSG00000025289	protein_coding	Prdx4	ENSMUST00000130349	protein_coding		X	-1	155340754	935
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000144911	protein_coding		4	1	43382057	362
ENSMUSG00000041313	protein_coding	Slc7a1	ENSMUST00000048116	protein_coding	principal1	5	-1	148399904	7179
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000131037	processed_transcript		4	1	43382070	1693
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000206294	retained_intron		7	-1	123369915	3658
ENSMUSG00000035439	protein_coding	Haus8	ENSMUST00000123495	nonsense_mediated_decay		8	-1	71272460	3987
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000205936	nonsense_mediated_decay		7	-1	123369915	469
ENSMUSG00000117736	lincRNA	Gm50386	ENSMUST00000236204	lincRNA		18	1	86601971	1069
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000135216	protein_coding		4	1	43383449	524
ENSMUSG00000112497	lincRNA	4930525C09Rik	ENSMUST00000217919	lincRNA		10	1	97714772	677
ENSMUSG00000030766	protein_coding	Arhgap17	ENSMUST00000205805	retained_intron		7	-1	123369876	1100
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000152322	protein_coding		4	1	43383510	428
ENSMUSG00000041313	protein_coding	Slc7a1	ENSMUST00000138257	protein_coding		5	-1	148392815	1792
ENSMUSG00000112497	lincRNA	4930525C09Rik	ENSMUST00000219383	lincRNA		10	1	97714785	453
ENSMUSG00000025289	protein_coding	Prdx4	ENSMUST00000123915	processed_transcript		X	-1	155338474	1025
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000150066	processed_transcript		4	1	43384279	470
ENSMUSG00000041313	protein_coding	Slc7a1	ENSMUST00000201860	retained_intron		5	-1	148342729	2151
ENSMUSG00000097886	protein_coding	Gsg1l2	ENSMUST00000181566	protein_coding	principal1	11	1	67774608	1158
ENSMUSG00000046699	protein_coding	Slitrk4	ENSMUST00000069926	protein_coding	principal1	X	-1	64276996	8494
ENSMUSG00000081821	processed_pseudogene	Gm15158	ENSMUST00000120577	processed_pseudogene		X	1	155477096	570
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000136360	protein_coding		4	1	43384332	368
ENSMUSG00000083362	processed_pseudogene	Gm8606	ENSMUST00000121482	processed_pseudogene		X	-1	155504924	888
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000113757	protein_coding		2	1	29889795	3082
ENSMUSG00000097886	protein_coding	Gsg1l2	ENSMUST00000155317	protein_coding		11	1	67780943	251
ENSMUSG00000030763	protein_coding	Lcmt1	ENSMUST00000206721	protein_coding		7	1	123369784	365
ENSMUSG00000022269	protein_coding	Marchf11	ENSMUST00000126304	protein_coding	alternative2	15	1	26309048	2146
ENSMUSG00000041313	protein_coding	Slc7a1	ENSMUST00000202457	protein_coding		5	-1	148399791	663
ENSMUSG00000041313	protein_coding	Slc7a1	ENSMUST00000138596	protein_coding		5	-1	148371546	675
ENSMUSG00000041313	protein_coding	Slc7a1	ENSMUST00000201348	retained_intron		5	-1	148393648	2232
ENSMUSG00000084932	antisense	Gm15156	ENSMUST00000148217	antisense		X	1	155622789	417
ENSMUSG00000046699	protein_coding	Slitrk4	ENSMUST00000114679	protein_coding	principal1	X	-1	64276979	3513
ENSMUSG00000031889	protein_coding	D230025D16Rik	ENSMUST00000156561	retained_intron		8	1	105225206	2937
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000035201	protein_coding	principal3	9	-1	107872829	3999
ENSMUSG00000081965	processed_pseudogene	Gm11620	ENSMUST00000118770	processed_pseudogene		11	-1	105166620	1845
ENSMUSG00000046699	protein_coding	Slitrk4	ENSMUST00000156121	protein_coding		X	-1	64275822	703
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000125393	retained_intron		4	1	43401238	4585
ENSMUSG00000025932	protein_coding	Eya1	ENSMUST00000080664	protein_coding		1	-1	14310119	3426
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000125399	protein_coding		4	1	43401253	384
ENSMUSG00000029592	protein_coding	Usp30	ENSMUST00000202603	protein_coding		5	1	114065514	652
ENSMUSG00000041552	protein_coding	Ptchd1	ENSMUST00000038665	protein_coding	principal1	X	-1	155623325	2768
ENSMUSG00000025932	protein_coding	Eya1	ENSMUST00000190337	protein_coding	principal1	1	-1	14304570	2199
ENSMUSG00000022269	protein_coding	Marchf11	ENSMUST00000140840	protein_coding	principal3	15	1	26309064	1558
ENSMUSG00000029592	protein_coding	Usp30	ENSMUST00000160164	processed_transcript		5	1	114065750	305
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000113756	protein_coding	alternative1	2	1	29889795	3826
ENSMUSG00000027514	protein_coding	Zbp1	ENSMUST00000029018	protein_coding	principal1	2	-1	173218923	1989
ENSMUSG00000031889	protein_coding	D230025D16Rik	ENSMUST00000141957	nonsense_mediated_decay		8	1	105225206	2460
ENSMUSG00000030763	protein_coding	Lcmt1	ENSMUST00000206574	protein_coding	alternative2	7	1	123378056	1286
ENSMUSG00000036779	protein_coding	Tent4b	ENSMUST00000119033	protein_coding	principal1	8	1	88199213	4624
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000098106	protein_coding	principal1	4	1	43406435	5325
ENSMUSG00000041552	protein_coding	Ptchd1	ENSMUST00000170236	protein_coding		X	-1	155623118	1814
ENSMUSG00000022269	protein_coding	Marchf11	ENSMUST00000152841	protein_coding	alternative2	15	1	26309064	1365
ENSMUSG00000025932	protein_coding	Eya1	ENSMUST00000189526	protein_coding		1	-1	14231492	430
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000184845	nonsense_mediated_decay		2	1	29889798	3035
ENSMUSG00000025932	protein_coding	Eya1	ENSMUST00000188857	protein_coding		1	-1	14304619	725
ENSMUSG00000030763	protein_coding	Lcmt1	ENSMUST00000205880	processed_transcript		7	1	123408180	632
ENSMUSG00000041552	protein_coding	Ptchd1	ENSMUST00000141356	processed_transcript		X	-1	155623814	681
ENSMUSG00000025932	protein_coding	Eya1	ENSMUST00000185453	protein_coding		1	-1	14304628	664
ENSMUSG00000031889	protein_coding	D230025D16Rik	ENSMUST00000124113	nonsense_mediated_decay		8	1	105225267	2364
ENSMUSG00000036779	protein_coding	Tent4b	ENSMUST00000118952	protein_coding	principal1	8	1	88199214	4597
ENSMUSG00000027514	protein_coding	Zbp1	ENSMUST00000109116	protein_coding		2	-1	173218910	770
ENSMUSG00000036395	protein_coding	Glb1l2	ENSMUST00000040398	protein_coding		9	-1	26806432	3701
ENSMUSG00000022269	protein_coding	Marchf11	ENSMUST00000155819	retained_intron		15	1	26387719	702
ENSMUSG00000030763	protein_coding	Lcmt1	ENSMUST00000206488	retained_intron		7	1	123418143	1767
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000149556	processed_transcript		4	1	43406502	839
ENSMUSG00000031889	protein_coding	D230025D16Rik	ENSMUST00000132964	protein_coding		8	1	105230968	513
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000126103	processed_transcript		2	1	29889811	589
ENSMUSG00000025932	protein_coding	Eya1	ENSMUST00000187790	protein_coding		1	-1	14309836	664
ENSMUSG00000030763	protein_coding	Lcmt1	ENSMUST00000206727	retained_intron		7	1	123427860	548
ENSMUSG00000036779	protein_coding	Tent4b	ENSMUST00000125043	retained_intron		8	1	88245285	696
ENSMUSG00000055109	protein_coding	Gm15155	ENSMUST00000128838	processed_transcript		X	1	155624741	409
ENSMUSG00000036395	protein_coding	Glb1l2	ENSMUST00000066560	protein_coding	principal1	9	-1	26806468	3688
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000183032	protein_coding	alternative2	9	-1	107872821	3716
ENSMUSG00000025932	protein_coding	Eya1	ENSMUST00000185329	retained_intron		1	-1	14310051	3677
ENSMUSG00000036779	protein_coding	Tent4b	ENSMUST00000154115	protein_coding		8	1	88251972	739
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000139198	protein_coding		4	1	43406557	726
ENSMUSG00000031889	protein_coding	D230025D16Rik	ENSMUST00000133035	retained_intron		8	1	105246493	707
ENSMUSG00000027514	protein_coding	Zbp1	ENSMUST00000146802	retained_intron		2	-1	173218897	3325
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000133233	protein_coding		2	1	29889815	658
ENSMUSG00000114350	lincRNA	D14Ertd670e	ENSMUST00000225736	lincRNA		14	1	19838925	565
ENSMUSG00000036395	protein_coding	Glb1l2	ENSMUST00000162702	protein_coding		9	-1	26806421	2555
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000149221	protein_coding		4	1	43407329	363
ENSMUSG00000055109	protein_coding	Gm15155	ENSMUST00000112542	protein_coding	principal1	X	1	155624775	1009
ENSMUSG00000036779	protein_coding	Tent4b	ENSMUST00000066748	protein_coding		8	1	88199213	4489
ENSMUSG00000069920	protein_coding	B3gnt9	ENSMUST00000136822	protein_coding	principal1	8	-1	105255153	2516
ENSMUSG00000025932	protein_coding	Eya1	ENSMUST00000027066	protein_coding	principal1	1	-1	14310200	4347
ENSMUSG00000081386	processed_pseudogene	Gm15160	ENSMUST00000120553	processed_pseudogene		X	1	155922917	907
ENSMUSG00000036395	protein_coding	Glb1l2	ENSMUST00000162252	protein_coding		9	-1	26802585	2209
ENSMUSG00000030763	protein_coding	Lcmt1	ENSMUST00000033025	protein_coding	principal2	7	1	123377982	1369
ENSMUSG00000033902	protein_coding	Mapkbp1	ENSMUST00000066058	protein_coding	principal2	2	1	119972699	6942
ENSMUSG00000082612	processed_pseudogene	4930503H13Rik	ENSMUST00000118320	processed_pseudogene		X	1	156539151	725
ENSMUSG00000116679	processed_pseudogene	Gm49739	ENSMUST00000232064	processed_pseudogene		16	1	42663926	210
ENSMUSG00000036395	protein_coding	Glb1l2	ENSMUST00000160458	retained_intron		9	-1	26768470	416
ENSMUSG00000102588	TEC	Gm37444	ENSMUST00000193605	TEC		1	-1	14255990	439
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000173682	nonsense_mediated_decay		4	1	43414696	4256
ENSMUSG00000083573	processed_pseudogene	Gm7312	ENSMUST00000118798	processed_pseudogene		X	-1	156679803	469
ENSMUSG00000069920	protein_coding	B3gnt9	ENSMUST00000161745	protein_coding		8	-1	105255151	642
ENSMUSG00000036395	protein_coding	Glb1l2	ENSMUST00000161635	retained_intron		9	-1	26792219	626
ENSMUSG00000033902	protein_coding	Mapkbp1	ENSMUST00000229024	protein_coding	alternative2	2	1	119972903	4687
ENSMUSG00000084246	processed_pseudogene	Gm15162	ENSMUST00000119325	processed_pseudogene		X	1	156788206	283
ENSMUSG00000069920	protein_coding	B3gnt9	ENSMUST00000093217	protein_coding	principal1	8	-1	105255151	2325
ENSMUSG00000100798	lincRNA	Gm19589	ENSMUST00000189394	lincRNA		1	1	88551517	2623
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000131668	protein_coding		4	1	43414696	5093
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000181986	nonsense_mediated_decay		9	-1	107872763	2066
ENSMUSG00000099863	protein_coding	1700031L13Rik	ENSMUST00000188072	protein_coding	principal1	5	-1	82124710	812
ENSMUSG00000036395	protein_coding	Glb1l2	ENSMUST00000162378	nonsense_mediated_decay		9	-1	26806422	840
ENSMUSG00000033902	protein_coding	Mapkbp1	ENSMUST00000137760	retained_intron		2	1	120011687	738
ENSMUSG00000104057	TEC	Gm38130	ENSMUST00000194311	TEC		1	1	88653085	1761
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000113759	protein_coding	alternative1	2	1	29889817	3807
ENSMUSG00000036395	protein_coding	Glb1l2	ENSMUST00000216272	retained_intron		9	-1	26803698	4103
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000146710	processed_transcript		4	1	43416438	772
ENSMUSG00000085711	processed_pseudogene	Gm15163	ENSMUST00000120749	processed_pseudogene		X	-1	157017530	1302
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000183152	retained_intron		9	-1	107780301	800
ENSMUSG00000033902	protein_coding	Mapkbp1	ENSMUST00000128077	retained_intron		2	1	120013043	666
ENSMUSG00000022179	protein_coding	4931414P19Rik	ENSMUST00000022786	protein_coding	principal1	14	-1	54605993	2670
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000154754	retained_intron		4	1	43422492	718
ENSMUSG00000097140	lincRNA	Gm26779	ENSMUST00000181101	lincRNA		5	1	109886231	551
ENSMUSG00000099863	protein_coding	1700031L13Rik	ENSMUST00000185410	protein_coding	principal1	5	-1	82124713	806
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000182092	retained_intron		9	-1	107791161	665
ENSMUSG00000035969	protein_coding	Rusc2	ENSMUST00000123447	retained_intron		4	1	43423591	253
ENSMUSG00000100367	lincRNA	Gm29336	ENSMUST00000186042	lincRNA		1	1	88656308	573
ENSMUSG00000033902	protein_coding	Mapkbp1	ENSMUST00000148161	retained_intron		2	1	120022061	709
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000194436	protein_coding		9	-1	107791928	647
ENSMUSG00000090015	protein_coding	Gm15446	ENSMUST00000112544	protein_coding	principal1	5	1	109923400	2417
ENSMUSG00000022179	protein_coding	4931414P19Rik	ENSMUST00000227280	protein_coding		14	-1	54585009	442
ENSMUSG00000099863	protein_coding	1700031L13Rik	ENSMUST00000185607	protein_coding	principal1	5	-1	82123345	732
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000113755	protein_coding		2	1	29889818	2305
ENSMUSG00000090015	protein_coding	Gm15446	ENSMUST00000146564	retained_intron		5	1	109933563	1551
ENSMUSG00000099863	protein_coding	1700031L13Rik	ENSMUST00000186079	protein_coding	principal1	5	-1	82123337	556
ENSMUSG00000090015	protein_coding	Gm15446	ENSMUST00000170826	protein_coding		5	1	109940426	192
ENSMUSG00000022179	protein_coding	4931414P19Rik	ENSMUST00000228422	retained_intron		14	-1	54585499	564
ENSMUSG00000106926	processed_pseudogene	Rpl7-ps7	ENSMUST00000200912	processed_pseudogene		5	1	82336851	799
ENSMUSG00000082269	processed_pseudogene	Gm14676	ENSMUST00000117722	processed_pseudogene		X	-1	64751258	858
ENSMUSG00000022507	protein_coding	1810013L24Rik	ENSMUST00000023150	protein_coding	principal1	16	1	8830100	4072
ENSMUSG00000106606	processed_pseudogene	Gm43217	ENSMUST00000199513	processed_pseudogene		5	-1	83041004	367
ENSMUSG00000075070	lincRNA	4932412D23Rik	ENSMUST00000142270	lincRNA		16	-1	42875587	4105
ENSMUSG00000022507	protein_coding	1810013L24Rik	ENSMUST00000229318	protein_coding		16	1	8831321	1245
ENSMUSG00000083084	processed_pseudogene	Gm14667	ENSMUST00000119448	processed_pseudogene		X	-1	64844041	1350
ENSMUSG00000082708	processed_pseudogene	Gm15172	ENSMUST00000118945	processed_pseudogene		X	-1	157378984	1046
ENSMUSG00000097863	lincRNA	1010001B22Rik	ENSMUST00000181488	lincRNA		5	-1	109996398	589
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000153216	retained_intron		2	1	29889825	828
ENSMUSG00000075070	lincRNA	4932412D23Rik	ENSMUST00000099759	lincRNA		16	-1	42875762	715
ENSMUSG00000068674	processed_pseudogene	Gm10247	ENSMUST00000090395	processed_pseudogene		16	-1	8922389	330
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000137558	protein_coding		2	1	29889834	814
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000195883	protein_coding		9	-1	107872733	648
ENSMUSG00000116525	lincRNA	Gm30371	ENSMUST00000230927	lincRNA		16	1	8944913	4425
ENSMUSG00000075070	lincRNA	4932412D23Rik	ENSMUST00000147181	lincRNA		16	-1	42875740	579
ENSMUSG00000057457	protein_coding	Phex	ENSMUST00000135713	protein_coding		X	-1	157165662	3588
ENSMUSG00000075070	lincRNA	4932412D23Rik	ENSMUST00000130331	lincRNA		16	-1	42875746	366
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000193957	processed_transcript		9	-1	107872735	383
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000046571	protein_coding	alternative1	2	1	29889895	3959
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000028128	protein_coding	principal3	2	1	29890063	2376
ENSMUSG00000047963	protein_coding	Stbd1	ENSMUST00000200941	protein_coding		5	1	92603041	523
ENSMUSG00000029592	protein_coding	Usp30	ENSMUST00000031588	protein_coding	principal1	5	1	114100315	4604
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000194250	processed_transcript		9	-1	107847326	404
ENSMUSG00000085145	antisense	Gm11614	ENSMUST00000137598	antisense		11	1	97723651	736
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000150827	processed_transcript		2	1	29890083	349
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000113762	protein_coding		2	1	29890143	2353
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000113765	protein_coding	alternative1	2	1	29890156	3188
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000182301	retained_intron		9	-1	107872744	3527
ENSMUSG00000029592	protein_coding	Usp30	ENSMUST00000200119	protein_coding		5	1	114100360	1303
ENSMUSG00000047963	protein_coding	Stbd1	ENSMUST00000050952	protein_coding	principal1	5	1	92603051	1985
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000183179	retained_intron		9	-1	107851433	645
ENSMUSG00000029592	protein_coding	Usp30	ENSMUST00000196574	retained_intron		5	1	114103712	768
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000195866	protein_coding		9	-1	107872775	447
ENSMUSG00000029592	protein_coding	Usp30	ENSMUST00000198457	retained_intron		5	1	114111128	520
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000113764	protein_coding	principal3	2	1	29890540	2450
ENSMUSG00000022477	protein_coding	Aco2	ENSMUST00000023116	protein_coding	principal1	15	1	81872309	2918
ENSMUSG00000106484	processed_pseudogene	Gm17833	ENSMUST00000197629	processed_pseudogene		5	1	114108926	1065
ENSMUSG00000047963	protein_coding	Stbd1	ENSMUST00000202332	nonsense_mediated_decay		5	1	92603068	1769
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000183035	protein_coding		9	-1	107872421	412
ENSMUSG00000116352	processed_pseudogene	Gm49447	ENSMUST00000229458	processed_pseudogene		16	-1	8996396	309
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000192474	processed_transcript		9	-1	107872771	656
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000130899	processed_transcript		2	1	29891996	395
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000182242	retained_intron		9	-1	107872722	2282
ENSMUSG00000116426	lincRNA	Gm30567	ENSMUST00000229201	lincRNA		16	1	9049972	500
ENSMUSG00000032582	protein_coding	Rbm6	ENSMUST00000182445	retained_intron		9	-1	107873237	4397
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000129960	processed_transcript		2	1	29903544	674
ENSMUSG00000116469	lincRNA	Gm49448	ENSMUST00000229154	lincRNA		16	1	9079396	722
ENSMUSG00000022477	protein_coding	Aco2	ENSMUST00000135198	protein_coding		15	1	81872484	456
ENSMUSG00000102670	TEC	Gm37436	ENSMUST00000193842	TEC		9	-1	107820012	1085
ENSMUSG00000116469	lincRNA	Gm49448	ENSMUST00000229166	lincRNA		16	1	9080145	673
ENSMUSG00000022477	protein_coding	Aco2	ENSMUST00000157003	protein_coding		15	1	81872484	351
ENSMUSG00000116348	processed_pseudogene	Gm18722	ENSMUST00000231156	processed_pseudogene		16	-1	9107770	2363
ENSMUSG00000022477	protein_coding	Aco2	ENSMUST00000229068	protein_coding		15	1	81872508	589
ENSMUSG00000116123	lincRNA	Gm49451	ENSMUST00000229655	lincRNA		16	1	9158770	664
ENSMUSG00000029177	protein_coding	Cenpa	ENSMUST00000144742	protein_coding	principal1	5	1	30666777	1466
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000152932	processed_transcript		2	1	29903575	793
ENSMUSG00000022477	protein_coding	Aco2	ENSMUST00000231091	protein_coding		15	1	81872690	438
ENSMUSG00000018547	protein_coding	Pip4k2b	ENSMUST00000018691	protein_coding	principal1	11	-1	97744704	5053
ENSMUSG00000045994	protein_coding	B3gat1	ENSMUST00000160899	protein_coding	alternative1	9	1	26733728	3801
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000131165	retained_intron		2	1	29912624	553
ENSMUSG00000022477	protein_coding	Aco2	ENSMUST00000231075	retained_intron		15	1	81895306	712
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000152503	retained_intron		2	1	29914394	4291
ENSMUSG00000026790	protein_coding	Odf2	ENSMUST00000152026	retained_intron		2	1	29925472	673
ENSMUSG00000018547	protein_coding	Pip4k2b	ENSMUST00000144012	processed_transcript		11	-1	97726743	576
ENSMUSG00000029554	protein_coding	Mad1l1	ENSMUST00000110829	nonsense_mediated_decay		5	-1	140321550	2547
ENSMUSG00000022477	protein_coding	Aco2	ENSMUST00000126352	retained_intron		15	1	81907079	782
ENSMUSG00000022477	protein_coding	Aco2	ENSMUST00000155704	retained_intron		15	1	81907359	653
ENSMUSG00000045994	protein_coding	B3gat1	ENSMUST00000161431	protein_coding	principal3	9	1	26733803	3858
ENSMUSG00000047181	protein_coding	Samd14	ENSMUST00000055947	protein_coding	principal1	11	1	95009879	3318
ENSMUSG00000049866	protein_coding	Arl4c	ENSMUST00000051236	nonsense_mediated_decay		1	-1	88701876	2742
ENSMUSG00000022477	protein_coding	Aco2	ENSMUST00000144324	retained_intron		15	1	81910289	703
ENSMUSG00000057457	protein_coding	Phex	ENSMUST00000138396	protein_coding		X	-1	157415312	2201
ENSMUSG00000045994	protein_coding	B3gat1	ENSMUST00000159799	protein_coding	alternative1	9	1	26733824	2021
ENSMUSG00000045994	protein_coding	B3gat1	ENSMUST00000115269	protein_coding	alternative1	9	1	26733851	1665
ENSMUSG00000043881	protein_coding	Kbtbd7	ENSMUST00000061222	protein_coding	principal1	14	1	79426511	4526
ENSMUSG00000049866	protein_coding	Arl4c	ENSMUST00000159814	protein_coding	principal1	1	-1	88702221	3997
ENSMUSG00000032583	protein_coding	Mon1a	ENSMUST00000191906	protein_coding		9	1	107888151	2821
ENSMUSG00000045994	protein_coding	B3gat1	ENSMUST00000159527	retained_intron		9	1	26755284	1661
ENSMUSG00000029155	protein_coding	Spata18	ENSMUST00000071077	protein_coding	principal2	5	1	73651379	1978
ENSMUSG00000049866	protein_coding	Arl4c	ENSMUST00000187810	protein_coding	principal1	1	-1	88701876	2740
ENSMUSG00000075502	protein_coding	Kbtbd6	ENSMUST00000226192	protein_coding	principal2	14	1	79451835	2984
ENSMUSG00000047181	protein_coding	Samd14	ENSMUST00000128512	processed_transcript		11	1	95009882	1294
ENSMUSG00000045994	protein_coding	B3gat1	ENSMUST00000161115	protein_coding	principal3	9	1	26751562	3426
ENSMUSG00000101736	processed_pseudogene	Gm29335	ENSMUST00000188361	processed_pseudogene		1	-1	88722824	459
ENSMUSG00000047181	protein_coding	Samd14	ENSMUST00000124735	protein_coding		11	1	95010281	766
ENSMUSG00000075502	protein_coding	Kbtbd6	ENSMUST00000100359	protein_coding	alternative2	14	1	79451835	2982
ENSMUSG00000029155	protein_coding	Spata18	ENSMUST00000041422	non_stop_decay		5	1	73651382	1666
ENSMUSG00000097398	lincRNA	Platr5	ENSMUST00000181016	lincRNA		1	1	88754890	479
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000226519	protein_coding	principal1	14	1	55540266	4625
ENSMUSG00000029554	protein_coding	Mad1l1	ENSMUST00000031534	protein_coding	principal1	5	-1	140321552	2640
ENSMUSG00000097398	lincRNA	Platr5	ENSMUST00000180596	lincRNA		1	1	88754954	358
ENSMUSG00000058135	protein_coding	Gstm1	ENSMUST00000004140	protein_coding	principal1	3	-1	108017973	1289
ENSMUSG00000030284	protein_coding	Creld1	ENSMUST00000032422	protein_coding	principal1	6	1	113483297	2306
ENSMUSG00000057457	protein_coding	Phex	ENSMUST00000079945	protein_coding	principal1	X	-1	157415286	6265
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000226352	protein_coding		14	1	55540389	2784
ENSMUSG00000058135	protein_coding	Gstm1	ENSMUST00000198532	processed_transcript		3	-1	108013316	597
ENSMUSG00000083841	processed_pseudogene	Gm1947	ENSMUST00000122451	processed_pseudogene		X	1	157429417	910
ENSMUSG00000058135	protein_coding	Gstm1	ENSMUST00000153314	protein_coding		3	-1	108016600	883
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000226514	retained_intron		14	1	55540390	980
ENSMUSG00000029554	protein_coding	Mad1l1	ENSMUST00000199237	processed_transcript		5	-1	140174918	1603
ENSMUSG00000032583	protein_coding	Mon1a	ENSMUST00000035202	protein_coding	principal1	9	1	107888182	2042
ENSMUSG00000029554	protein_coding	Mad1l1	ENSMUST00000128579	processed_transcript		5	-1	140115466	399
ENSMUSG00000030284	protein_coding	Creld1	ENSMUST00000147932	retained_intron		6	1	113483423	1609
ENSMUSG00000058135	protein_coding	Gstm1	ENSMUST00000126593	protein_coding		3	-1	108017806	828
ENSMUSG00000029554	protein_coding	Mad1l1	ENSMUST00000129747	processed_transcript		5	-1	140174659	276
ENSMUSG00000030284	protein_coding	Creld1	ENSMUST00000156764	retained_intron		6	1	113483855	643
ENSMUSG00000042078	protein_coding	Svop	ENSMUST00000058472	protein_coding	principal1	5	-1	114091570	3379
ENSMUSG00000081514	processed_pseudogene	Gm14673	ENSMUST00000121973	processed_pseudogene		X	1	64944129	746
ENSMUSG00000030284	protein_coding	Creld1	ENSMUST00000135852	retained_intron		6	1	113487494	920
ENSMUSG00000030284	protein_coding	Creld1	ENSMUST00000204920	retained_intron		6	1	113492017	1327
ENSMUSG00000029155	protein_coding	Spata18	ENSMUST00000178631	protein_coding		5	1	73659261	1437
ENSMUSG00000030059	protein_coding	Tmf1	ENSMUST00000095664	protein_coding	principal1	6	-1	97179122	5732
ENSMUSG00000055817	protein_coding	Mta3	ENSMUST00000112350	protein_coding	alternative2	17	1	83706163	1723
ENSMUSG00000030284	protein_coding	Creld1	ENSMUST00000129125	retained_intron		6	1	113492019	889
ENSMUSG00000029123	protein_coding	Stk32b	ENSMUST00000094836	protein_coding	principal1	5	-1	37717171	3458
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000226770	retained_intron		14	1	55540406	2417
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000226664	retained_intron		14	1	55540413	2631
ENSMUSG00000029554	protein_coding	Mad1l1	ENSMUST00000132832	processed_transcript		5	-1	140262565	706
ENSMUSG00000113297	processed_pseudogene	Rpl17-ps6	ENSMUST00000222192	processed_pseudogene		13	-1	48763581	532
ENSMUSG00000030059	protein_coding	Tmf1	ENSMUST00000124173	nonsense_mediated_decay		6	-1	97179037	3191
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000226270	retained_intron		14	1	55540467	2799
ENSMUSG00000029155	protein_coding	Spata18	ENSMUST00000113548	protein_coding	alternative2	5	1	73657535	1623
ENSMUSG00000106497	TEC	Gm43195	ENSMUST00000200614	TEC		5	-1	140151487	2332
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000228240	protein_coding		14	1	55542401	1656
ENSMUSG00000030059	protein_coding	Tmf1	ENSMUST00000204190	processed_transcript		6	-1	97168811	524
ENSMUSG00000027956	protein_coding	Tmem144	ENSMUST00000029568	protein_coding	principal1	3	-1	79842679	2898
ENSMUSG00000045009	protein_coding	Prrt3	ENSMUST00000204268	protein_coding	alternative2	6	-1	113501883	3741
ENSMUSG00000029407	protein_coding	Uso1	ENSMUST00000031355	protein_coding	principal2	5	1	92137938	3898
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000161805	protein_coding	principal3	7	-1	31041839	1166
ENSMUSG00000042078	protein_coding	Svop	ENSMUST00000134790	processed_transcript		5	-1	114065218	1682
ENSMUSG00000042078	protein_coding	Svop	ENSMUST00000149480	retained_intron		5	-1	114042881	666
ENSMUSG00000027956	protein_coding	Tmem144	ENSMUST00000168038	protein_coding	principal1	3	-1	79841729	2220
ENSMUSG00000068874	protein_coding	Selenbp1	ENSMUST00000140757	nonsense_mediated_decay		3	1	94933056	1703
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000228921	nonsense_mediated_decay		14	1	55542405	533
ENSMUSG00000029407	protein_coding	Uso1	ENSMUST00000202155	protein_coding	alternative2	5	1	92137946	3707
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000226650	protein_coding		14	1	55542405	1888
ENSMUSG00000042078	protein_coding	Svop	ENSMUST00000140151	retained_intron		5	-1	114091380	1482
ENSMUSG00000055817	protein_coding	Mta3	ENSMUST00000112349	protein_coding	alternative2	17	1	83706163	1728
ENSMUSG00000029177	protein_coding	Cenpa	ENSMUST00000133316	nonsense_mediated_decay		5	1	30666897	1031
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000228283	retained_intron		14	1	55543570	603
ENSMUSG00000027956	protein_coding	Tmem144	ENSMUST00000193410	protein_coding		3	-1	79852773	628
ENSMUSG00000022031	protein_coding	Elp3	ENSMUST00000225355	protein_coding	principal1	14	-1	65593052	2771
ENSMUSG00000042078	protein_coding	Svop	ENSMUST00000150106	protein_coding		5	-1	114091367	869
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000226231	protein_coding		14	1	55543588	480
ENSMUSG00000027956	protein_coding	Tmem144	ENSMUST00000192341	protein_coding		3	-1	79852768	242
ENSMUSG00000022193	protein_coding	Psmb5	ENSMUST00000022803	protein_coding	principal1	14	-1	54618022	899
ENSMUSG00000045009	protein_coding	Prrt3	ENSMUST00000204134	protein_coding	alternative2	6	-1	113501931	3424
ENSMUSG00000061118	protein_coding	Dnajc30	ENSMUST00000071263	protein_coding	principal1	5	1	135064202	1661
ENSMUSG00000022031	protein_coding	Elp3	ENSMUST00000022609	protein_coding		14	-1	65593075	2851
ENSMUSG00000029407	protein_coding	Uso1	ENSMUST00000201380	retained_intron		5	1	92137947	3549
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000226295	processed_transcript		14	1	55543944	443
ENSMUSG00000027956	protein_coding	Tmem144	ENSMUST00000194338	processed_transcript		3	-1	79842912	352
ENSMUSG00000114969	processed_pseudogene	Hba-ps3	ENSMUST00000227090	processed_pseudogene		15	-1	56172389	402
ENSMUSG00000022193	protein_coding	Psmb5	ENSMUST00000227257	protein_coding		14	-1	54618008	622
ENSMUSG00000022031	protein_coding	Elp3	ENSMUST00000224743	nonsense_mediated_decay		14	-1	65593050	2914
ENSMUSG00000040618	protein_coding	Pck2	ENSMUST00000048781	protein_coding		14	1	55540266	3400
ENSMUSG00000115622	processed_pseudogene	Gm49117	ENSMUST00000226714	processed_pseudogene		14	1	55537869	924
ENSMUSG00000029407	protein_coding	Uso1	ENSMUST00000201642	nonsense_mediated_decay		5	1	92137966	2427
ENSMUSG00000115778	antisense	Gm10876	ENSMUST00000228843	antisense		14	-1	55542399	4874
ENSMUSG00000045009	protein_coding	Prrt3	ENSMUST00000101059	protein_coding	principal3	6	-1	113501818	3304
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000093813	protein_coding	principal4	14	1	51984838	5621
ENSMUSG00000078935	protein_coding	1700025C18Rik	ENSMUST00000109304	protein_coding	principal1	2	-1	165090750	702
ENSMUSG00000029407	protein_coding	Uso1	ENSMUST00000202362	processed_transcript		5	1	92181389	731
ENSMUSG00000029177	protein_coding	Cenpa	ENSMUST00000134846	nonsense_mediated_decay		5	1	30666912	1007
ENSMUSG00000024647	protein_coding	Cbln2	ENSMUST00000068423	protein_coding	principal1	18	1	86711110	2475
ENSMUSG00000045009	protein_coding	Prrt3	ENSMUST00000205170	protein_coding	alternative2	6	-1	113501887	1903
ENSMUSG00000084111	processed_pseudogene	Gm15710	ENSMUST00000121821	processed_pseudogene		5	-1	92140929	636
ENSMUSG00000024647	protein_coding	Cbln2	ENSMUST00000122464	protein_coding	principal1	18	1	86711520	1907
ENSMUSG00000045009	protein_coding	Prrt3	ENSMUST00000205075	protein_coding	alternative2	6	-1	113501893	1956
ENSMUSG00000057835	protein_coding	Zfp119a	ENSMUST00000079642	protein_coding	principal1	17	-1	55878930	2018
ENSMUSG00000107354	TEC	Gm43040	ENSMUST00000202399	TEC		5	-1	92191917	558
ENSMUSG00000024647	protein_coding	Cbln2	ENSMUST00000122079	protein_coding	principal1	18	1	86712065	2549
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182740	retained_intron		14	1	51984844	2191
ENSMUSG00000029177	protein_coding	Cenpa	ENSMUST00000150810	retained_intron		5	1	30666935	1120
ENSMUSG00000031181	protein_coding	Ctag2	ENSMUST00000033524	protein_coding	principal1	X	1	65047644	854
ENSMUSG00000029177	protein_coding	Cenpa	ENSMUST00000149759	protein_coding		5	1	30666943	346
ENSMUSG00000024647	protein_coding	Cbln2	ENSMUST00000169470	protein_coding	principal1	18	1	86713048	2201
ENSMUSG00000059503	protein_coding	Olfr248	ENSMUST00000075329	protein_coding	principal1	1	1	174391046	1010
ENSMUSG00000029177	protein_coding	Cenpa	ENSMUST00000199320	protein_coding		5	1	30666957	369
ENSMUSG00000074207	protein_coding	Adh1	ENSMUST00000162032	processed_transcript		3	1	138260991	797
ENSMUSG00000022023	protein_coding	Wbp4	ENSMUST00000022601	protein_coding	principal1	14	-1	79481520	3704
ENSMUSG00000107027	lincRNA	1700019F05Rik	ENSMUST00000202487	lincRNA		5	1	73912896	533
ENSMUSG00000072423	protein_coding	Psmb11	ENSMUST00000228446	protein_coding		14	1	54621433	571
ENSMUSG00000055817	protein_coding	Mta3	ENSMUST00000112352	protein_coding	alternative2	17	1	83706163	2674
ENSMUSG00000118328	processed_pseudogene	Gm46615	ENSMUST00000237262	processed_pseudogene		18	1	86779751	427
ENSMUSG00000029177	protein_coding	Cenpa	ENSMUST00000197962	retained_intron		5	1	30666960	3806
ENSMUSG00000106968	lincRNA	C78283	ENSMUST00000202711	lincRNA		5	1	73946381	848
ENSMUSG00000072423	protein_coding	Psmb11	ENSMUST00000097177	protein_coding	principal1	14	1	54625310	4247
ENSMUSG00000022023	protein_coding	Wbp4	ENSMUST00000228161	processed_transcript		14	-1	79472237	3671
ENSMUSG00000029177	protein_coding	Cenpa	ENSMUST00000031073	nonsense_mediated_decay		5	1	30666974	993
ENSMUSG00000050050	protein_coding	Ccdc158	ENSMUST00000136004	retained_intron		5	-1	92612503	599
ENSMUSG00000022023	protein_coding	Wbp4	ENSMUST00000227584	nonsense_mediated_decay		14	-1	79480962	1512
ENSMUSG00000080828	processed_pseudogene	Gm14669	ENSMUST00000118841	processed_pseudogene		X	-1	65070610	250
ENSMUSG00000029177	protein_coding	Cenpa	ENSMUST00000199617	nonsense_mediated_decay		5	1	30666998	827
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000100639	protein_coding	alternative2	14	1	51984864	4843
ENSMUSG00000083074	processed_pseudogene	Gm14670	ENSMUST00000117327	processed_pseudogene		X	1	65086838	337
ENSMUSG00000022023	protein_coding	Wbp4	ENSMUST00000228105	retained_intron		14	-1	79467419	2085
ENSMUSG00000068874	protein_coding	Selenbp1	ENSMUST00000090839	protein_coding	principal1	3	1	94933056	1712
ENSMUSG00000083243	processed_pseudogene	Gm14668	ENSMUST00000118588	processed_pseudogene		X	1	65936349	1724
ENSMUSG00000029177	protein_coding	Cenpa	ENSMUST00000134372	retained_intron		5	1	30671955	1010
ENSMUSG00000083570	processed_pseudogene	Gm14671	ENSMUST00000121790	processed_pseudogene		X	1	66024044	262
ENSMUSG00000033044	protein_coding	Dhrs7c	ENSMUST00000123862	processed_transcript		11	1	67798187	549
ENSMUSG00000033044	protein_coding	Dhrs7c	ENSMUST00000149722	processed_transcript		11	1	67798271	342
ENSMUSG00000068874	protein_coding	Selenbp1	ENSMUST00000139949	retained_intron		3	1	94933066	1189
ENSMUSG00000068874	protein_coding	Selenbp1	ENSMUST00000134202	nonsense_mediated_decay		3	1	94933120	1456
ENSMUSG00000087357	lincRNA	Gm12498	ENSMUST00000138374	lincRNA		3	-1	108025249	2458
ENSMUSG00000083627	processed_pseudogene	Gm12502	ENSMUST00000120197	processed_pseudogene		3	1	108019885	444
ENSMUSG00000068874	protein_coding	Selenbp1	ENSMUST00000145551	processed_transcript		3	1	94933159	368
ENSMUSG00000033044	protein_coding	Dhrs7c	ENSMUST00000135830	processed_transcript		11	1	67798276	585
ENSMUSG00000033044	protein_coding	Dhrs7c	ENSMUST00000142686	processed_transcript		11	1	67798277	574
ENSMUSG00000081688	unprocessed_pseudogene	Gm12499	ENSMUST00000121961	unprocessed_pseudogene		3	-1	108031361	546
ENSMUSG00000082863	processed_pseudogene	Gm14674	ENSMUST00000117816	processed_pseudogene		X	1	66025549	342
ENSMUSG00000055817	protein_coding	Mta3	ENSMUST00000177069	nonsense_mediated_decay		17	1	83706184	3287
ENSMUSG00000068348	unprocessed_pseudogene	Gm10238	ENSMUST00000089689	unprocessed_pseudogene		15	-1	75238768	408
ENSMUSG00000032584	protein_coding	Mst1r	ENSMUST00000035203	protein_coding	principal1	9	1	107906873	4722
ENSMUSG00000100462	unprocessed_pseudogene	Gm28115	ENSMUST00000188985	unprocessed_pseudogene		15	-1	75247357	360
ENSMUSG00000074207	protein_coding	Adh1	ENSMUST00000004232	protein_coding	principal1	3	1	138277494	1492
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000183208	nonsense_mediated_decay		14	1	51984886	4826
ENSMUSG00000074207	protein_coding	Adh1	ENSMUST00000161799	retained_intron		3	1	138277645	773
ENSMUSG00000043004	protein_coding	Gng2	ENSMUST00000160013	protein_coding	principal1	14	-1	19977249	3826
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182909	protein_coding	principal4	14	1	51984909	5108
ENSMUSG00000031585	protein_coding	Gtf2e2	ENSMUST00000170705	protein_coding	principal1	8	1	33731833	1634
ENSMUSG00000022583	protein_coding	Ly6f	ENSMUST00000189654	protein_coding	principal1	15	1	75268702	818
ENSMUSG00000033044	protein_coding	Dhrs7c	ENSMUST00000168612	protein_coding	principal1	11	1	67798287	1108
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182760	protein_coding	alternative2	14	1	51984910	5130
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000161684	protein_coding	principal3	7	-1	31042481	1172
ENSMUSG00000022583	protein_coding	Ly6f	ENSMUST00000023247	protein_coding	principal1	15	1	75268421	877
ENSMUSG00000040463	protein_coding	Mybbp1a	ENSMUST00000045633	protein_coding	principal1	11	1	72441355	4358
ENSMUSG00000074207	protein_coding	Adh1	ENSMUST00000159159	nonsense_mediated_decay		3	1	138277651	1115
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182609	retained_intron		14	1	51984912	848
ENSMUSG00000031585	protein_coding	Gtf2e2	ENSMUST00000167264	protein_coding	principal1	8	1	33732042	1566
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182338	nonsense_mediated_decay		14	1	51984915	812
ENSMUSG00000032584	protein_coding	Mst1r	ENSMUST00000195617	nonsense_mediated_decay		9	1	107906907	4717
ENSMUSG00000089635	antisense	Gm16559	ENSMUST00000160080	antisense		3	-1	138307022	1564
ENSMUSG00000031585	protein_coding	Gtf2e2	ENSMUST00000187392	protein_coding		8	1	33732133	575
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000205301	retained_intron		7	-1	31037938	593
ENSMUSG00000032584	protein_coding	Mst1r	ENSMUST00000195113	retained_intron		9	1	107915003	345
ENSMUSG00000031585	protein_coding	Gtf2e2	ENSMUST00000190675	protein_coding		8	1	33732311	419
ENSMUSG00000118025	processed_pseudogene	Gm5691	ENSMUST00000236986	processed_pseudogene		18	1	86914648	921
ENSMUSG00000055817	protein_coding	Mta3	ENSMUST00000067826	protein_coding	principal3	17	1	83706191	2087
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182061	protein_coding	alternative2	14	1	51984931	4756
ENSMUSG00000032584	protein_coding	Mst1r	ENSMUST00000194527	retained_intron		9	1	107916224	600
ENSMUSG00000111836	lincRNA	4933407I05Rik	ENSMUST00000213467	lincRNA		9	1	51914427	420
ENSMUSG00000111836	lincRNA	4933407I05Rik	ENSMUST00000217562	lincRNA		9	1	51914427	1561
ENSMUSG00000117908	processed_pseudogene	Gm5971	ENSMUST00000236018	processed_pseudogene		18	-1	86926918	955
ENSMUSG00000031585	protein_coding	Gtf2e2	ENSMUST00000190639	protein_coding		8	1	33733443	471
ENSMUSG00000111836	lincRNA	4933407I05Rik	ENSMUST00000214646	lincRNA		9	1	51914429	796
ENSMUSG00000043004	protein_coding	Gng2	ENSMUST00000055100	protein_coding	principal1	14	-1	19977172	572
ENSMUSG00000055817	protein_coding	Mta3	ENSMUST00000177416	processed_transcript		17	1	83729164	506
ENSMUSG00000055817	protein_coding	Mta3	ENSMUST00000176816	protein_coding		17	1	83755634	882
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182961	retained_intron		14	1	51984966	2903
ENSMUSG00000111836	lincRNA	4933407I05Rik	ENSMUST00000213311	lincRNA		9	1	51914447	482
ENSMUSG00000055817	protein_coding	Mta3	ENSMUST00000176054	protein_coding		17	1	83788921	765
ENSMUSG00000066368	protein_coding	Actl11	ENSMUST00000085073	protein_coding	principal1	9	1	107928469	3993
ENSMUSG00000031585	protein_coding	Gtf2e2	ENSMUST00000186200	processed_transcript		8	1	33765002	471
ENSMUSG00000118250	processed_pseudogene	Gm5234	ENSMUST00000236658	processed_pseudogene		18	1	87231932	1862
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182193	protein_coding		14	1	51984971	393
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000162250	protein_coding		7	-1	31039046	500
ENSMUSG00000043004	protein_coding	Gng2	ENSMUST00000159073	protein_coding	principal1	14	-1	19977627	960
ENSMUSG00000117969	processed_pseudogene	Gm5826	ENSMUST00000235146	processed_pseudogene		18	-1	87474671	484
ENSMUSG00000031585	protein_coding	Gtf2e2	ENSMUST00000171010	protein_coding	principal1	8	1	33732339	1664
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182480	processed_transcript		14	1	51991634	461
ENSMUSG00000055817	protein_coding	Mta3	ENSMUST00000175920	processed_transcript		17	1	83795422	499
ENSMUSG00000117683	processed_pseudogene	Gm50389	ENSMUST00000237348	processed_pseudogene		18	1	87576208	207
ENSMUSG00000111357	lincRNA	Gm6980	ENSMUST00000214327	lincRNA		9	-1	51931661	1003
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000160006	retained_intron		7	-1	31040424	885
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182019	retained_intron		14	1	51991758	336
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182412	nonsense_mediated_decay		14	1	51994174	822
ENSMUSG00000094500	protein_coding	Smim18	ENSMUST00000179364	protein_coding	principal1	8	-1	33747770	587
ENSMUSG00000043004	protein_coding	Gng2	ENSMUST00000159028	protein_coding	principal1	14	-1	19977059	458
ENSMUSG00000069324	protein_coding	Gm5096	ENSMUST00000091776	protein_coding	principal1	18	1	87756286	1866
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000183167	retained_intron		14	1	51995352	924
ENSMUSG00000071708	protein_coding	Sms	ENSMUST00000112529	protein_coding	principal1	X	-1	157492287	3717
ENSMUSG00000118171	processed_pseudogene	Gm50390	ENSMUST00000235287	processed_pseudogene		18	-1	87852040	591
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000162733	protein_coding		7	-1	31042118	2998
ENSMUSG00000043004	protein_coding	Gng2	ENSMUST00000162425	protein_coding	principal1	14	-1	19977184	393
ENSMUSG00000043004	protein_coding	Gng2	ENSMUST00000161247	protein_coding	principal1	14	-1	19976693	419
ENSMUSG00000071708	protein_coding	Sms	ENSMUST00000145477	nonsense_mediated_decay		X	-1	157492066	1540
ENSMUSG00000040463	protein_coding	Mybbp1a	ENSMUST00000152894	retained_intron		11	1	72441355	4448
ENSMUSG00000071708	protein_coding	Sms	ENSMUST00000146026	retained_intron		X	-1	157460861	650
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182644	retained_intron		14	1	51997753	1429
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000162116	protein_coding	principal3	7	-1	31042078	817
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182667	protein_coding		14	1	52002358	827
ENSMUSG00000071708	protein_coding	Sms	ENSMUST00000127089	retained_intron		X	-1	157492044	3053
ENSMUSG00000114436	lincRNA	Gm48283	ENSMUST00000224546	lincRNA		14	1	19866980	1474
ENSMUSG00000040463	protein_coding	Mybbp1a	ENSMUST00000162048	retained_intron		11	1	72441357	4014
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000159924	protein_coding	principal3	7	-1	31042078	805
ENSMUSG00000071708	protein_coding	Sms	ENSMUST00000123770	protein_coding		X	-1	157491372	321
ENSMUSG00000117147	unprocessed_pseudogene	Gm11166	ENSMUST00000233183	unprocessed_pseudogene		17	-1	13098472	1624
ENSMUSG00000040463	protein_coding	Mybbp1a	ENSMUST00000156833	retained_intron		11	1	72441377	762
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000183022	retained_intron		14	1	52002386	387
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000009831	protein_coding	alternative2	7	-1	31042146	803
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182217	protein_coding		14	1	52002433	638
ENSMUSG00000040463	protein_coding	Mybbp1a	ENSMUST00000134119	retained_intron		11	1	72443772	698
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000129691	protein_coding		5	-1	135056927	833
ENSMUSG00000040463	protein_coding	Mybbp1a	ENSMUST00000144374	retained_intron		11	1	72448217	856
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182931	retained_intron		14	1	52003571	820
ENSMUSG00000040463	protein_coding	Mybbp1a	ENSMUST00000155995	retained_intron		11	1	72449638	910
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182828	protein_coding		14	1	52004082	608
ENSMUSG00000087250	antisense	Usp46os1	ENSMUST00000129275	antisense		5	1	74014215	508
ENSMUSG00000040463	protein_coding	Mybbp1a	ENSMUST00000144923	retained_intron		11	1	72450574	427
ENSMUSG00000106993	TEC	Gm43417	ENSMUST00000201586	TEC		5	-1	74053505	5207
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000183213	retained_intron		14	1	52004488	515
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000162087	protein_coding	principal3	7	-1	31042140	762
ENSMUSG00000061356	protein_coding	Nuggc	ENSMUST00000150897	protein_coding	principal1	14	1	65598546	2745
ENSMUSG00000086234	processed_transcript	Usp46os2	ENSMUST00000202793	retained_intron		5	1	74032268	578
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182777	retained_intron		14	1	52004502	676
ENSMUSG00000004562	protein_coding	Arhgef40	ENSMUST00000182504	retained_intron		14	1	52004589	478
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000202395	protein_coding		7	-1	31042116	353
ENSMUSG00000061356	protein_coding	Nuggc	ENSMUST00000079469	protein_coding		14	1	65605267	2567
ENSMUSG00000086234	processed_transcript	Usp46os2	ENSMUST00000152787	antisense		5	1	74032274	831
ENSMUSG00000035200	protein_coding	Chrnb4	ENSMUST00000034854	protein_coding	principal1	9	-1	55048779	3723
ENSMUSG00000047678	protein_coding	Gpr82	ENSMUST00000053659	protein_coding	principal1	X	1	13661363	2497
ENSMUSG00000086234	processed_transcript	Usp46os2	ENSMUST00000180935	processed_transcript		5	1	74032269	577
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000160689	protein_coding		7	-1	31042113	375
ENSMUSG00000036461	protein_coding	Elf1	ENSMUST00000040131	protein_coding	principal2	14	1	79481194	4235
ENSMUSG00000037801	protein_coding	Iqch	ENSMUST00000042322	protein_coding	alternative2	9	-1	63602493	3672
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000159753	protein_coding		7	-1	31042087	375
ENSMUSG00000009687	protein_coding	Fxyd5	ENSMUST00000161259	retained_intron		7	-1	31042140	338
ENSMUSG00000059552	protein_coding	Trp53	ENSMUST00000005371	protein_coding	alternative2	11	1	69580359	1772
ENSMUSG00000036461	protein_coding	Elf1	ENSMUST00000110835	protein_coding	principal2	14	1	79515674	3888
ENSMUSG00000111050	antisense	Gm47877	ENSMUST00000217609	antisense		9	1	55030783	811
ENSMUSG00000036461	protein_coding	Elf1	ENSMUST00000227192	protein_coding	alternative2	14	1	79515686	3765
ENSMUSG00000111750	processed_pseudogene	Gm47886	ENSMUST00000215591	processed_pseudogene		9	1	55054804	435
ENSMUSG00000060739	protein_coding	Nsa2	ENSMUST00000073456	protein_coding	principal1	13	-1	97137937	2700
ENSMUSG00000106089	processed_pseudogene	Gm9419	ENSMUST00000200672	processed_pseudogene		3	1	144727884	567
ENSMUSG00000036461	protein_coding	Elf1	ENSMUST00000227104	processed_transcript		14	1	79515698	2778
ENSMUSG00000037801	protein_coding	Iqch	ENSMUST00000163982	protein_coding	principal3	9	-1	63602448	3375
ENSMUSG00000059552	protein_coding	Trp53	ENSMUST00000147512	processed_transcript		11	1	69580402	3275
ENSMUSG00000060739	protein_coding	Nsa2	ENSMUST00000225410	protein_coding		13	-1	97137852	974
ENSMUSG00000037801	protein_coding	Iqch	ENSMUST00000163624	protein_coding	alternative2	9	-1	63602448	3339
ENSMUSG00000111157	lincRNA	Gm47887	ENSMUST00000216217	lincRNA		9	-1	55067463	1295
ENSMUSG00000059552	protein_coding	Trp53	ENSMUST00000108657	protein_coding	alternative2	11	1	69580405	1822
ENSMUSG00000060739	protein_coding	Nsa2	ENSMUST00000224980	retained_intron		13	-1	97137873	2106
ENSMUSG00000037801	protein_coding	Iqch	ENSMUST00000080527	protein_coding	alternative2	9	-1	63602483	2753
ENSMUSG00000110793	processed_pseudogene	Gm7395	ENSMUST00000216059	processed_pseudogene		9	-1	55095370	1045
ENSMUSG00000037801	protein_coding	Iqch	ENSMUST00000171243	protein_coding	alternative2	9	-1	63602417	3099
ENSMUSG00000059552	protein_coding	Trp53	ENSMUST00000130540	processed_transcript		11	1	69588695	403
ENSMUSG00000025898	protein_coding	Cwf19l2	ENSMUST00000027027	protein_coding	principal1	9	1	3403592	4446
ENSMUSG00000037801	protein_coding	Iqch	ENSMUST00000170960	retained_intron		9	-1	63602485	3688
ENSMUSG00000025898	protein_coding	Cwf19l2	ENSMUST00000212644	retained_intron		9	1	3404088	2085
ENSMUSG00000032403	protein_coding	2300009A05Rik	ENSMUST00000186165	processed_transcript		9	-1	63398827	545
ENSMUSG00000005481	protein_coding	Ddx39	ENSMUST00000019576	protein_coding	principal1	8	1	83715177	1656
ENSMUSG00000025898	protein_coding	Cwf19l2	ENSMUST00000212128	retained_intron		9	1	3404088	2283
ENSMUSG00000025898	protein_coding	Cwf19l2	ENSMUST00000212101	retained_intron		9	1	3440563	3920
ENSMUSG00000115064	processed_pseudogene	Gm49213	ENSMUST00000228801	processed_pseudogene		15	1	56415013	214
ENSMUSG00000106424	antisense	Gm34866	ENSMUST00000196146	antisense		3	1	144749482	515
ENSMUSG00000105900	antisense	Gm43240	ENSMUST00000198543	antisense		3	1	144808376	630
ENSMUSG00000032403	protein_coding	2300009A05Rik	ENSMUST00000168665	protein_coding	principal1	9	-1	63399241	595
ENSMUSG00000059552	protein_coding	Trp53	ENSMUST00000171247	protein_coding	alternative2	11	1	69580359	1867
ENSMUSG00000059552	protein_coding	Trp53	ENSMUST00000108658	protein_coding	principal3	11	1	69580359	1771
ENSMUSG00000032403	protein_coding	2300009A05Rik	ENSMUST00000187234	processed_transcript		9	-1	63398827	512
ENSMUSG00000032403	protein_coding	2300009A05Rik	ENSMUST00000185528	retained_intron		9	-1	63399246	1771
ENSMUSG00000113107	processed_pseudogene	Gm3338	ENSMUST00000220982	processed_pseudogene		13	1	62322396	269
ENSMUSG00000116419	unprocessed_pseudogene	Gm19267	ENSMUST00000229517	unprocessed_pseudogene		15	-1	82423447	696
ENSMUSG00000054814	protein_coding	Usp46	ENSMUST00000119154	protein_coding		5	-1	74068420	4738
ENSMUSG00000005481	protein_coding	Ddx39	ENSMUST00000127505	retained_intron		8	1	83715268	1927
ENSMUSG00000005481	protein_coding	Ddx39	ENSMUST00000140521	nonsense_mediated_decay		8	1	83715268	1551
ENSMUSG00000053166	protein_coding	Cdh22	ENSMUST00000138643	nonsense_mediated_decay		2	-1	165181459	2521
ENSMUSG00000040280	protein_coding	Ndufa4l2	ENSMUST00000218492	processed_transcript		10	1	127514967	377
ENSMUSG00000110485	lincRNA	Gm45740	ENSMUST00000212103	lincRNA		8	-1	76415040	2003
ENSMUSG00000040280	protein_coding	Ndufa4l2	ENSMUST00000218302	processed_transcript		10	1	127514967	994
ENSMUSG00000040447	protein_coding	Spns2	ENSMUST00000045303	protein_coding	principal1	11	-1	72489904	3241
ENSMUSG00000110655	lincRNA	Gm45798	ENSMUST00000212370	lincRNA		8	1	76289516	511
ENSMUSG00000098215	processed_pseudogene	Gm7069	ENSMUST00000182418	processed_pseudogene		8	1	76293972	1008
ENSMUSG00000110553	processed_pseudogene	Gm45742	ENSMUST00000212400	processed_pseudogene		8	-1	76117027	433
ENSMUSG00000110595	processed_pseudogene	Gm7990	ENSMUST00000212126	processed_pseudogene		8	-1	76395724	593
ENSMUSG00000057000	protein_coding	Nxf3	ENSMUST00000080929	protein_coding	principal1	X	-1	136085255	2978
ENSMUSG00000110603	lincRNA	Gm45741	ENSMUST00000212661	lincRNA		8	1	76010026	152
ENSMUSG00000113495	lincRNA	Gm19792	ENSMUST00000222522	lincRNA		13	-1	62340727	2021
ENSMUSG00000035722	protein_coding	Abca7	ENSMUST00000132517	protein_coding	principal3	10	1	79996494	6696
ENSMUSG00000040447	protein_coding	Spns2	ENSMUST00000129274	retained_intron		11	-1	72454541	2365
ENSMUSG00000005481	protein_coding	Ddx39	ENSMUST00000212949	nonsense_mediated_decay		8	1	83715272	3836
ENSMUSG00000040447	protein_coding	Spns2	ENSMUST00000150491	processed_transcript		11	-1	72456350	980
ENSMUSG00000054814	protein_coding	Usp46	ENSMUST00000068058	protein_coding	principal1	5	-1	74068431	4557
ENSMUSG00000094942	protein_coding	Gm3604	ENSMUST00000187656	protein_coding	principal1	13	-1	62383177	2310
ENSMUSG00000057000	protein_coding	Nxf3	ENSMUST00000138878	protein_coding		X	-1	136085242	561
ENSMUSG00000040447	protein_coding	Spns2	ENSMUST00000144940	protein_coding		11	-1	72456621	783
ENSMUSG00000040280	protein_coding	Ndufa4l2	ENSMUST00000035735	protein_coding	principal1	10	1	127514967	934
ENSMUSG00000005481	protein_coding	Ddx39	ENSMUST00000109810	protein_coding	principal1	8	1	83715548	1794
ENSMUSG00000035722	protein_coding	Abca7	ENSMUST00000043866	protein_coding	principal3	10	1	79997615	6590
ENSMUSG00000040447	protein_coding	Spns2	ENSMUST00000126452	processed_transcript		11	-1	72454118	489
ENSMUSG00000094942	protein_coding	Gm3604	ENSMUST00000202194	protein_coding		13	-1	62383151	736
ENSMUSG00000005481	protein_coding	Ddx39	ENSMUST00000138789	retained_intron		8	1	83719613	754
ENSMUSG00000094942	protein_coding	Gm3604	ENSMUST00000107989	protein_coding		13	-1	62371936	1677
ENSMUSG00000005481	protein_coding	Ddx39	ENSMUST00000172396	protein_coding	principal1	8	1	83715272	3836
ENSMUSG00000113151	processed_pseudogene	Gm48690	ENSMUST00000222983	processed_pseudogene		13	1	62385104	313
ENSMUSG00000022629	protein_coding	Kif21a	ENSMUST00000088614	protein_coding	alternative2	15	-1	91049845	6333
ENSMUSG00000113865	processed_pseudogene	Selenok-ps6	ENSMUST00000221812	processed_pseudogene		13	-1	62387933	283
ENSMUSG00000040447	protein_coding	Spns2	ENSMUST00000147418	processed_transcript		11	-1	72475027	375
ENSMUSG00000087553	processed_transcript	5730412P04Rik	ENSMUST00000147100	processed_transcript		X	1	136104603	1149
ENSMUSG00000035722	protein_coding	Abca7	ENSMUST00000171637	protein_coding	alternative2	10	1	79997576	6638
ENSMUSG00000054814	protein_coding	Usp46	ENSMUST00000128750	processed_transcript		5	-1	74035641	1315
ENSMUSG00000054814	protein_coding	Usp46	ENSMUST00000152408	protein_coding		5	-1	74029368	2969
ENSMUSG00000054814	protein_coding	Usp46	ENSMUST00000150009	retained_intron		5	-1	74032591	389
ENSMUSG00000054814	protein_coding	Usp46	ENSMUST00000145016	protein_coding		5	-1	74065748	452
ENSMUSG00000022629	protein_coding	Kif21a	ENSMUST00000109287	protein_coding	alternative2	15	-1	91049818	5988
ENSMUSG00000106973	TEC	Gm43415	ENSMUST00000201934	TEC		5	1	74060038	750
ENSMUSG00000053166	protein_coding	Cdh22	ENSMUST00000065438	protein_coding	principal1	2	-1	165234853	3702
ENSMUSG00000047844	protein_coding	Bex4	ENSMUST00000116527	protein_coding	principal1	X	1	136138996	837
ENSMUSG00000032312	protein_coding	Csk	ENSMUST00000034863	protein_coding	principal1	9	-1	57645653	2749
ENSMUSG00000032312	protein_coding	Csk	ENSMUST00000217314	protein_coding	principal1	9	-1	57634067	2162
ENSMUSG00000086630	antisense	Gm14397	ENSMUST00000124728	antisense		2	1	165159412	576
ENSMUSG00000022629	protein_coding	Kif21a	ENSMUST00000067205	protein_coding		15	-1	91049838	6184
ENSMUSG00000032312	protein_coding	Csk	ENSMUST00000215396	protein_coding	principal1	9	-1	57653631	2390
ENSMUSG00000022629	protein_coding	Kif21a	ENSMUST00000230487	protein_coding		15	-1	90951306	663
ENSMUSG00000032312	protein_coding	Csk	ENSMUST00000213660	retained_intron		9	-1	57628761	652
ENSMUSG00000022629	protein_coding	Kif21a	ENSMUST00000229801	protein_coding		15	-1	90966402	750
ENSMUSG00000032312	protein_coding	Csk	ENSMUST00000217128	protein_coding		9	-1	57631485	521
ENSMUSG00000028847	protein_coding	Trappc3	ENSMUST00000030660	protein_coding	principal1	4	1	126262325	1336
ENSMUSG00000032312	protein_coding	Csk	ENSMUST00000216934	protein_coding		9	-1	57645109	554
ENSMUSG00000028847	protein_coding	Trappc3	ENSMUST00000126786	processed_transcript		4	1	126262400	737
ENSMUSG00000032312	protein_coding	Csk	ENSMUST00000216979	protein_coding		9	-1	57645617	389
ENSMUSG00000032312	protein_coding	Csk	ENSMUST00000215958	retained_intron		9	-1	57630970	392
ENSMUSG00000052595	protein_coding	A1cf	ENSMUST00000224564	protein_coding		19	1	31868764	1432
ENSMUSG00000084913	antisense	Gm7616	ENSMUST00000143112	antisense		9	1	59951285	624
ENSMUSG00000074235	bidirectional_promoter_lncRNA	Gm10649	ENSMUST00000143324	bidirectional_promoter_lncRNA		8	-1	76899985	841
ENSMUSG00000066613	protein_coding	Zfp932	ENSMUST00000112540	protein_coding	principal2	5	1	109996521	2081
ENSMUSG00000056025	protein_coding	Clca3a1	ENSMUST00000029932	nonsense_mediated_decay		3	-1	144760977	3798
ENSMUSG00000032312	protein_coding	Csk	ENSMUST00000213943	processed_transcript		9	-1	57653471	393
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000226522	protein_coding	principal2	14	-1	52014582	2804
ENSMUSG00000050050	protein_coding	Ccdc158	ENSMUST00000060930	protein_coding	principal1	5	-1	92675125	3676
ENSMUSG00000022629	protein_coding	Kif21a	ENSMUST00000109288	protein_coding	principal3	15	-1	91049948	6142
ENSMUSG00000084847	lincRNA	Gm15507	ENSMUST00000140263	lincRNA		9	-1	59961771	805
ENSMUSG00000066613	protein_coding	Zfp932	ENSMUST00000099484	protein_coding		5	1	109996522	451
ENSMUSG00000074235	bidirectional_promoter_lncRNA	Gm10649	ENSMUST00000136538	bidirectional_promoter_lncRNA		8	-1	76900173	1537
ENSMUSG00000084847	lincRNA	Gm15507	ENSMUST00000140958	lincRNA		9	-1	59961771	658
ENSMUSG00000074235	bidirectional_promoter_lncRNA	Gm10649	ENSMUST00000148066	bidirectional_promoter_lncRNA		8	-1	76900621	1812
ENSMUSG00000022629	protein_coding	Kif21a	ENSMUST00000100304	protein_coding	alternative2	15	-1	91049948	6439
ENSMUSG00000066613	protein_coding	Zfp932	ENSMUST00000125213	protein_coding		5	1	109996532	868
ENSMUSG00000084847	lincRNA	Gm15507	ENSMUST00000133523	lincRNA		9	-1	59961801	592
ENSMUSG00000066613	protein_coding	Zfp932	ENSMUST00000143639	protein_coding		5	1	109996542	749
ENSMUSG00000050050	protein_coding	Ccdc158	ENSMUST00000212060	protein_coding		5	-1	92643884	589
ENSMUSG00000031618	protein_coding	Nr3c2	ENSMUST00000143284	protein_coding		8	1	76899442	270
ENSMUSG00000066613	protein_coding	Zfp932	ENSMUST00000142180	retained_intron		5	1	109996563	563
ENSMUSG00000032051	protein_coding	Fdx1	ENSMUST00000034552	protein_coding	principal1	9	-1	51963546	875
ENSMUSG00000050050	protein_coding	Ccdc158	ENSMUST00000151180	protein_coding		5	-1	92675265	3352
ENSMUSG00000066613	protein_coding	Zfp932	ENSMUST00000112536	protein_coding		5	1	110006396	2509
ENSMUSG00000066613	protein_coding	Zfp932	ENSMUST00000187241	protein_coding	alternative2	5	1	110006616	1581
ENSMUSG00000050050	protein_coding	Ccdc158	ENSMUST00000150359	protein_coding		5	-1	92675271	3353
ENSMUSG00000090963	protein_coding	Gm17655	ENSMUST00000210275	protein_coding	principal1	5	-1	110072513	1776
ENSMUSG00000090963	protein_coding	Gm17655	ENSMUST00000167969	protein_coding		5	-1	110046486	255
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000228580	protein_coding	alternative2	14	-1	52020701	2812
ENSMUSG00000032051	protein_coding	Fdx1	ENSMUST00000214486	nonsense_mediated_decay		9	-1	51948707	596
ENSMUSG00000032051	protein_coding	Fdx1	ENSMUST00000214013	protein_coding		9	-1	51963556	2759
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000067549	protein_coding	principal2	14	-1	52020733	2933
ENSMUSG00000052595	protein_coding	A1cf	ENSMUST00000224304	protein_coding	alternative1	19	1	31868764	2968
ENSMUSG00000038047	protein_coding	Haus6	ENSMUST00000070607	protein_coding	principal1	4	-1	86612055	6158
ENSMUSG00000034858	protein_coding	Fam214a	ENSMUST00000216809	processed_transcript		9	1	74952884	2018
ENSMUSG00000038400	protein_coding	Pmepa1	ENSMUST00000036248	protein_coding	principal1	2	-1	173276533	4538
ENSMUSG00000052595	protein_coding	A1cf	ENSMUST00000075838	protein_coding	principal2	19	1	31868764	3414
ENSMUSG00000038400	protein_coding	Pmepa1	ENSMUST00000139306	protein_coding		2	-1	173276189	720
ENSMUSG00000038400	protein_coding	Pmepa1	ENSMUST00000124124	retained_intron		2	-1	173234722	600
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000166169	protein_coding	principal2	14	-1	52019688	3017
ENSMUSG00000052595	protein_coding	A1cf	ENSMUST00000224400	protein_coding		19	1	31868773	1204
ENSMUSG00000087600	antisense	Pmepa1os	ENSMUST00000150185	antisense		2	1	173276698	680
ENSMUSG00000038047	protein_coding	Haus6	ENSMUST00000128381	processed_transcript		4	-1	86612055	2302
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000226474	retained_intron		14	-1	52007676	747
ENSMUSG00000052595	protein_coding	A1cf	ENSMUST00000225165	retained_intron		19	1	31868781	696
ENSMUSG00000025403	protein_coding	Shmt2	ENSMUST00000219239	protein_coding	alternative1	10	-1	127522386	2238
ENSMUSG00000038047	protein_coding	Haus6	ENSMUST00000123432	processed_transcript		4	-1	86612019	600
ENSMUSG00000038047	protein_coding	Haus6	ENSMUST00000125481	protein_coding		4	-1	86612049	443
ENSMUSG00000114443	processed_pseudogene	Gm19241	ENSMUST00000224809	processed_pseudogene		19	1	31913644	908
ENSMUSG00000086114	lincRNA	Gm14642	ENSMUST00000147357	lincRNA		2	1	173394566	470
ENSMUSG00000118326	processed_pseudogene	Gm8887	ENSMUST00000235570	processed_pseudogene		18	1	67907628	1297
ENSMUSG00000056025	protein_coding	Clca3a1	ENSMUST00000059091	protein_coding	principal1	3	-1	144760841	3524
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000226964	protein_coding		14	-1	52010882	787
ENSMUSG00000032292	protein_coding	Nr2e3	ENSMUST00000130831	retained_intron		9	-1	59950034	2686
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000228747	protein_coding		14	-1	52010575	719
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000226527	protein_coding		14	-1	52015126	657
ENSMUSG00000104841	processed_pseudogene	Gm17743	ENSMUST00000198545	processed_pseudogene		3	1	144779012	1675
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000226605	protein_coding		14	-1	52019713	630
ENSMUSG00000030286	protein_coding	Emc3	ENSMUST00000032425	protein_coding	principal1	6	-1	113531652	1985
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000228051	protein_coding		14	-1	52014912	431
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000109587	protein_coding	principal3	2	-1	156180238	2810
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000228162	protein_coding		14	-1	52019995	480
ENSMUSG00000117891	antisense	Gm41764	ENSMUST00000236198	antisense		18	-1	68118374	3452
ENSMUSG00000030286	protein_coding	Emc3	ENSMUST00000154605	retained_intron		6	-1	113520909	638
ENSMUSG00000118306	processed_pseudogene	Gm18149	ENSMUST00000237336	processed_pseudogene		18	-1	68168967	520
ENSMUSG00000025403	protein_coding	Shmt2	ENSMUST00000026470	protein_coding	principal2	10	-1	127522444	2289
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000015146	protein_coding	principal1	15	1	65787040	5215
ENSMUSG00000030286	protein_coding	Emc3	ENSMUST00000203526	retained_intron		6	-1	113531618	1216
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000226554	protein_coding		14	-1	52020719	495
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000146297	protein_coding	alternative1	2	-1	156179580	2580
ENSMUSG00000027518	protein_coding	1700021F07Rik	ENSMUST00000029023	protein_coding	principal1	2	1	173522586	646
ENSMUSG00000049295	protein_coding	Zfp219	ENSMUST00000227420	processed_transcript		14	-1	52020686	465
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000096411	processed_transcript		15	1	65787041	981
ENSMUSG00000025403	protein_coding	Shmt2	ENSMUST00000220356	retained_intron		10	-1	127518776	754
ENSMUSG00000021708	protein_coding	Rasgrf2	ENSMUST00000151408	protein_coding		13	-1	91987989	5797
ENSMUSG00000025403	protein_coding	Shmt2	ENSMUST00000218035	retained_intron		10	-1	127518780	722
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000173858	protein_coding		15	1	65787041	2848
ENSMUSG00000021708	protein_coding	Rasgrf2	ENSMUST00000142378	protein_coding		13	-1	91987989	1789
ENSMUSG00000115454	antisense	Gm49086	ENSMUST00000226970	antisense		14	1	52020076	908
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000142071	nonsense_mediated_decay		2	-1	156180149	2744
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000133983	protein_coding		17	1	69969073	7173
ENSMUSG00000020904	protein_coding	Cfap52	ENSMUST00000021287	protein_coding	principal1	11	-1	67965642	2199
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000029149	protein_coding	alternative1	2	-1	156180167	2711
ENSMUSG00000062329	protein_coding	Cytl1	ENSMUST00000073554	protein_coding	principal1	5	1	37735519	974
ENSMUSG00000072571	protein_coding	Tmem253	ENSMUST00000226268	processed_transcript		14	1	52015658	347
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000060072	protein_coding		17	1	69969246	5420
ENSMUSG00000020904	protein_coding	Cfap52	ENSMUST00000126766	protein_coding		11	-1	67965651	1195
ENSMUSG00000062329	protein_coding	Cytl1	ENSMUST00000201048	retained_intron		5	1	37737280	860
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000155823	retained_intron		17	1	69969368	3061
ENSMUSG00000025403	protein_coding	Shmt2	ENSMUST00000218258	processed_transcript		10	-1	127522402	960
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000125691	retained_intron		17	1	69969368	3535
ENSMUSG00000020904	protein_coding	Cfap52	ENSMUST00000123900	processed_transcript		11	-1	67930863	629
ENSMUSG00000025403	protein_coding	Shmt2	ENSMUST00000218313	processed_transcript		10	-1	127522401	397
ENSMUSG00000053054	protein_coding	Adh6a	ENSMUST00000013455	protein_coding	alternative2	3	1	138313286	2363
ENSMUSG00000107131	lincRNA	Gm43763	ENSMUST00000201761	lincRNA		5	1	37807306	683
ENSMUSG00000020904	protein_coding	Cfap52	ENSMUST00000142929	processed_transcript		11	-1	67945469	637
ENSMUSG00000024544	protein_coding	Ldlrad4	ENSMUST00000063775	protein_coding	principal1	18	1	67933257	2495
ENSMUSG00000025403	protein_coding	Shmt2	ENSMUST00000217682	retained_intron		10	-1	127522364	725
ENSMUSG00000032292	protein_coding	Nr2e3	ENSMUST00000034831	protein_coding	principal1	9	-1	59950117	2037
ENSMUSG00000040606	protein_coding	Kazn	ENSMUST00000155023	protein_coding		4	-1	142210206	4499
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000085984	protein_coding	principal2	5	-1	135064666	1516
ENSMUSG00000040606	protein_coding	Kazn	ENSMUST00000135922	processed_transcript		4	-1	142118111	241
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000174601	processed_transcript		15	1	65787042	643
ENSMUSG00000024544	protein_coding	Ldlrad4	ENSMUST00000236987	processed_transcript		18	1	68228067	3031
ENSMUSG00000021708	protein_coding	Rasgrf2	ENSMUST00000216219	protein_coding		13	-1	92131656	2115
ENSMUSG00000021708	protein_coding	Rasgrf2	ENSMUST00000149630	protein_coding		13	-1	92030904	502
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000172756	protein_coding		15	1	65787046	1411
ENSMUSG00000053054	protein_coding	Adh6a	ENSMUST00000106247	protein_coding	principal2	3	1	138313286	1341
ENSMUSG00000021708	protein_coding	Rasgrf2	ENSMUST00000146492	protein_coding		13	-1	92131656	1323
ENSMUSG00000102191	antisense	Gm36569	ENSMUST00000195082	antisense		3	-1	79886806	965
ENSMUSG00000040606	protein_coding	Kazn	ENSMUST00000173068	protein_coding	alternative2	4	-1	142159054	726
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000150798	retained_intron		17	1	69969373	2743
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000111205	protein_coding	alternative2	5	-1	135064078	1169
ENSMUSG00000021708	protein_coding	Rasgrf2	ENSMUST00000099326	protein_coding	principal1	13	-1	92131494	3567
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000071677	protein_coding		5	-1	135064959	1607
ENSMUSG00000032292	protein_coding	Nr2e3	ENSMUST00000128060	retained_intron		9	-1	59960659	1741
ENSMUSG00000109771	protein_coding	Gm35315	ENSMUST00000209865	retained_intron		5	-1	110080888	3457
ENSMUSG00000109771	protein_coding	Gm35315	ENSMUST00000210052	protein_coding	principal1	5	-1	110094420	3523
ENSMUSG00000040606	protein_coding	Kazn	ENSMUST00000036476	protein_coding	principal2	4	-1	142239401	3843
ENSMUSG00000109771	protein_coding	Gm35315	ENSMUST00000211397	protein_coding		5	-1	110094401	512
ENSMUSG00000028262	protein_coding	Clca3a2	ENSMUST00000029929	protein_coding	principal1	3	-1	144819494	3654
ENSMUSG00000032292	protein_coding	Nr2e3	ENSMUST00000156845	retained_intron		9	-1	59950110	1914
ENSMUSG00000072571	protein_coding	Tmem253	ENSMUST00000100638	protein_coding	principal2	14	1	52016865	1234
ENSMUSG00000028262	protein_coding	Clca3a2	ENSMUST00000199029	protein_coding		3	-1	144805805	649
ENSMUSG00000032292	protein_coding	Nr2e3	ENSMUST00000128108	retained_intron		9	-1	59950074	2614
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000174856	protein_coding		15	1	65787048	612
ENSMUSG00000028262	protein_coding	Clca3a2	ENSMUST00000197013	protein_coding		3	-1	144808625	762
ENSMUSG00000032292	protein_coding	Nr2e3	ENSMUST00000144391	retained_intron		9	-1	59948791	988
ENSMUSG00000038121	protein_coding	Fam210a	ENSMUST00000042852	protein_coding	principal1	18	-1	68300333	9651
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000174591	retained_intron		15	1	65787048	3225
ENSMUSG00000028262	protein_coding	Clca3a2	ENSMUST00000159643	retained_intron		3	-1	144818058	602
ENSMUSG00000072571	protein_coding	Tmem253	ENSMUST00000228408	protein_coding	alternative2	14	1	52016894	415
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000173008	processed_transcript		15	1	65787840	762
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000211878	protein_coding		15	1	65810234	2541
ENSMUSG00000032292	protein_coding	Nr2e3	ENSMUST00000147892	processed_transcript		9	-1	59949394	872
ENSMUSG00000040606	protein_coding	Kazn	ENSMUST00000129032	protein_coding		4	-1	142210108	3323
ENSMUSG00000027955	protein_coding	Gask1b	ENSMUST00000118853	protein_coding	principal1	3	1	79884533	6729
ENSMUSG00000072571	protein_coding	Tmem253	ENSMUST00000227295	protein_coding	alternative2	14	1	52016919	704
ENSMUSG00000032292	protein_coding	Nr2e3	ENSMUST00000143377	processed_transcript		9	-1	59960655	380
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000227340	protein_coding		15	1	65851121	518
ENSMUSG00000038121	protein_coding	Fam210a	ENSMUST00000152193	protein_coding		18	-1	68300202	649
ENSMUSG00000027955	protein_coding	Gask1b	ENSMUST00000145992	protein_coding		3	1	79884597	436
ENSMUSG00000040606	protein_coding	Kazn	ENSMUST00000148812	retained_intron		4	-1	142146465	5725
ENSMUSG00000032292	protein_coding	Nr2e3	ENSMUST00000138888	retained_intron		9	-1	59950074	778
ENSMUSG00000040606	protein_coding	Kazn	ENSMUST00000172864	protein_coding		4	-1	142210206	1858
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000174615	retained_intron		15	1	65851164	866
ENSMUSG00000027955	protein_coding	Gask1b	ENSMUST00000135021	protein_coding		3	1	79884931	552
ENSMUSG00000094878	protein_coding	Olfr130	ENSMUST00000215726	protein_coding	principal1	17	1	38063921	5810
ENSMUSG00000040606	protein_coding	Kazn	ENSMUST00000174432	protein_coding		4	-1	142210206	1128
ENSMUSG00000027955	protein_coding	Gask1b	ENSMUST00000193204	retained_intron		3	1	79886056	3590
ENSMUSG00000094878	protein_coding	Olfr130	ENSMUST00000217390	protein_coding	principal1	17	1	38063950	5959
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000173936	retained_intron		15	1	65855502	387
ENSMUSG00000055884	protein_coding	Fancm	ENSMUST00000223051	retained_intron		12	1	65075603	1682
ENSMUSG00000040606	protein_coding	Kazn	ENSMUST00000144611	retained_intron		4	-1	142154586	723
ENSMUSG00000015002	protein_coding	Efr3a	ENSMUST00000174749	retained_intron		15	1	65857508	691
ENSMUSG00000094878	protein_coding	Olfr130	ENSMUST00000087129	protein_coding	principal1	17	1	38067173	954
ENSMUSG00000027955	protein_coding	Gask1b	ENSMUST00000029567	protein_coding	principal1	3	1	79885930	6627
ENSMUSG00000087525	antisense	Gm13062	ENSMUST00000151337	antisense		4	1	142180602	562
ENSMUSG00000092495	processed_transcript	Gm20405	ENSMUST00000174002	processed_transcript		15	1	65857869	229
ENSMUSG00000111190	polymorphic_pseudogene	Olfr947-ps1	ENSMUST00000214075	polymorphic_pseudogene	principal1	9	-1	39299500	2165
ENSMUSG00000056174	protein_coding	Col8a2	ENSMUST00000070132	protein_coding	principal1	4	1	126286793	4332
ENSMUSG00000018287	protein_coding	Spag7	ENSMUST00000018431	protein_coding	principal1	11	-1	70669416	1159
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000202478	nonsense_mediated_decay		5	-1	135064039	826
ENSMUSG00000015812	protein_coding	Gnrh1	ENSMUST00000223929	protein_coding		14	1	67745181	428
ENSMUSG00000111190	polymorphic_pseudogene	Olfr947-ps1	ENSMUST00000214936	polymorphic_pseudogene	principal1	9	-1	39299548	2168
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000147756	retained_intron		5	-1	135056727	928
ENSMUSG00000111190	polymorphic_pseudogene	Olfr947-ps1	ENSMUST00000215471	polymorphic_pseudogene	principal1	9	-1	39299481	2177
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000134180	retained_intron		5	-1	135057019	465
ENSMUSG00000056174	protein_coding	Col8a2	ENSMUST00000128435	protein_coding		4	1	126300530	343
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000129169	processed_transcript		1	1	86016816	597
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000151551	retained_intron		5	-1	135056913	455
ENSMUSG00000018287	protein_coding	Spag7	ENSMUST00000137691	retained_intron		11	-1	70669218	830
ENSMUSG00000047751	protein_coding	Utf1	ENSMUST00000168457	protein_coding	principal1	7	1	139943789	1227
ENSMUSG00000018287	protein_coding	Spag7	ENSMUST00000124691	retained_intron		11	-1	70669279	772
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000155837	nonsense_mediated_decay		2	-1	156180176	2120
ENSMUSG00000015812	protein_coding	Gnrh1	ENSMUST00000111095	protein_coding	principal1	14	1	67745268	486
ENSMUSG00000018287	protein_coding	Spag7	ENSMUST00000129434	protein_coding		11	-1	70669290	474
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000153514	nonsense_mediated_decay		2	-1	156180184	2127
ENSMUSG00000006369	protein_coding	Fbln1	ENSMUST00000057410	protein_coding	principal3	15	1	85205949	3659
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000148794	protein_coding		2	-1	156164923	931
ENSMUSG00000031618	protein_coding	Nr3c2	ENSMUST00000109913	protein_coding	principal2	8	1	76899772	5916
ENSMUSG00000084338	processed_pseudogene	Gm13531	ENSMUST00000121893	processed_pseudogene		2	-1	57425709	543
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000146730	protein_coding		17	1	69969402	4862
ENSMUSG00000015812	protein_coding	Gnrh1	ENSMUST00000223951	protein_coding	principal1	14	1	67746270	411
ENSMUSG00000051579	protein_coding	Tceal8	ENSMUST00000060101	protein_coding	principal1	X	-1	136172342	1250
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000126992	protein_coding		2	-1	156180142	1090
ENSMUSG00000081642	processed_pseudogene	Gm13532	ENSMUST00000120373	processed_pseudogene		2	-1	57629228	240
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000130971	retained_intron		17	1	69969421	2914
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000141765	processed_transcript		5	-1	135061469	644
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000135274	retained_intron		2	-1	156165212	695
ENSMUSG00000006369	protein_coding	Fbln1	ENSMUST00000109432	protein_coding	alternative2	15	1	85206005	2273
ENSMUSG00000084294	processed_pseudogene	Gm13533	ENSMUST00000121104	processed_pseudogene		2	-1	57643824	177
ENSMUSG00000006369	protein_coding	Fbln1	ENSMUST00000160798	processed_transcript		15	1	85263454	400
ENSMUSG00000110205	lincRNA	Gm33594	ENSMUST00000209502	lincRNA		2	-1	57986017	1333
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000144891	retained_intron		5	-1	135064048	945
ENSMUSG00000051579	protein_coding	Tceal8	ENSMUST00000146583	protein_coding		X	-1	136172216	422
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000131625	processed_transcript		2	-1	156169231	546
ENSMUSG00000031618	protein_coding	Nr3c2	ENSMUST00000148106	nonsense_mediated_decay		8	1	76902288	3180
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000149108	retained_intron		5	-1	135061341	806
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000130516	retained_intron		2	-1	156168148	1456
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000146288	protein_coding		2	-1	156180159	754
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000148549	protein_coding		5	-1	135063764	390
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000155016	protein_coding		17	1	70424794	4712
ENSMUSG00000051579	protein_coding	Tceal8	ENSMUST00000136533	protein_coding		X	-1	136172201	417
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000141309	protein_coding		5	-1	135064090	235
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000150272	processed_transcript		2	-1	156172961	497
ENSMUSG00000031618	protein_coding	Nr3c2	ENSMUST00000109912	protein_coding	principal2	8	1	76902288	5675
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000138381	retained_intron		2	-1	156177731	711
ENSMUSG00000051579	protein_coding	Tceal8	ENSMUST00000163584	protein_coding	principal1	X	-1	136172251	2358
ENSMUSG00000020905	protein_coding	Usp43	ENSMUST00000021288	protein_coding	principal3	11	-1	67922153	4462
ENSMUSG00000001632	protein_coding	Brpf1	ENSMUST00000113122	protein_coding	alternative2	6	1	113307137	4773
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000129013	processed_transcript		5	-1	135064079	251
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000140001	processed_transcript		2	-1	156177383	685
ENSMUSG00000031618	protein_coding	Nr3c2	ENSMUST00000128862	protein_coding		8	1	76902347	612
ENSMUSG00000005378	protein_coding	Bud23	ENSMUST00000201554	protein_coding		5	-1	135064649	145
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000135938	protein_coding		17	1	70516022	2895
ENSMUSG00000031618	protein_coding	Nr3c2	ENSMUST00000109911	protein_coding		8	1	76902476	3804
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000146549	nonsense_mediated_decay		2	-1	156180161	707
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000233173	protein_coding		17	1	70516648	3496
ENSMUSG00000099848	lincRNA	Gm29337	ENSMUST00000185425	lincRNA		1	-1	88875410	284
ENSMUSG00000031618	protein_coding	Nr3c2	ENSMUST00000034031	protein_coding	alternative2	8	1	76908272	2955
ENSMUSG00000020905	protein_coding	Usp43	ENSMUST00000129961	retained_intron		11	-1	67876619	1600
ENSMUSG00000101333	processed_pseudogene	Gm4753	ENSMUST00000188327	processed_pseudogene		1	1	88932319	1255
ENSMUSG00000005804	protein_coding	Bloc1s6	ENSMUST00000005954	protein_coding	principal1	2	1	122738503	3484
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000147098	nonsense_mediated_decay		2	-1	156180147	593
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000233283	protein_coding	alternative2	17	1	70521677	2014
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000137297	retained_intron		2	-1	156177901	707
ENSMUSG00000001632	protein_coding	Brpf1	ENSMUST00000204198	protein_coding	alternative2	6	1	113307166	4307
ENSMUSG00000020905	protein_coding	Usp43	ENSMUST00000152120	processed_transcript		11	-1	67921209	642
ENSMUSG00000060613	protein_coding	Cyp2c70	ENSMUST00000051846	protein_coding	principal1	19	-1	40187286	1717
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000154677	nonsense_mediated_decay		2	-1	156179912	585
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000133717	protein_coding		17	1	70522055	2445
ENSMUSG00000099378	lincRNA	1700067G17Rik	ENSMUST00000186180	lincRNA		1	1	89016113	603
ENSMUSG00000020905	protein_coding	Usp43	ENSMUST00000108677	protein_coding	alternative2	11	-1	67922153	4447
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000137566	nonsense_mediated_decay		2	-1	156180156	743
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000156946	retained_intron		17	1	70522077	2765
ENSMUSG00000099544	processed_pseudogene	Gm18699	ENSMUST00000190713	processed_pseudogene		1	1	89048974	243
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000109584	protein_coding		2	-1	156180238	667
ENSMUSG00000031618	protein_coding	Nr3c2	ENSMUST00000126697	processed_transcript		8	1	77128013	350
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000232998	processed_transcript		17	1	70522114	447
ENSMUSG00000055134	processed_transcript	9130017K11Rik	ENSMUST00000135670	processed_transcript		11	1	67921504	3338
ENSMUSG00000055134	processed_transcript	9130017K11Rik	ENSMUST00000068548	processed_transcript		11	1	67922376	1417
ENSMUSG00000046873	protein_coding	Mbtps2	ENSMUST00000065857	processed_transcript		X	-1	157569005	1737
ENSMUSG00000087321	processed_pseudogene	Gm5353	ENSMUST00000139800	processed_pseudogene		8	-1	76863048	793
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000002532	protein_coding	principal3	2	-1	181693977	1511
ENSMUSG00000060613	protein_coding	Cyp2c70	ENSMUST00000171604	nonsense_mediated_decay		19	-1	40187286	778
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000126801	retained_intron		17	1	70522136	1835
ENSMUSG00000035266	protein_coding	Helq	ENSMUST00000044684	protein_coding	principal1	5	-1	100798598	3689
ENSMUSG00000117801	processed_pseudogene	Gm50391	ENSMUST00000237897	processed_pseudogene		18	-1	88096550	1267
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000132929	retained_intron		2	-1	156180196	672
ENSMUSG00000113623	transcribed_processed_pseudogene	Gm48691	ENSMUST00000221652	transcribed_processed_pseudogene		13	-1	62407878	1515
ENSMUSG00000005804	protein_coding	Bloc1s6	ENSMUST00000127595	processed_transcript		2	1	122738513	462
ENSMUSG00000001632	protein_coding	Brpf1	ENSMUST00000113121	protein_coding	alternative2	6	1	113307192	4603
ENSMUSG00000060613	protein_coding	Cyp2c70	ENSMUST00000165102	nonsense_mediated_decay		19	-1	40187286	387
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000152919	nonsense_mediated_decay		2	-1	156180149	699
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000108769	protein_coding		2	-1	181693930	1460
ENSMUSG00000113623	transcribed_processed_pseudogene	Gm48691	ENSMUST00000221436	processed_transcript		13	-1	62417043	633
ENSMUSG00000005804	protein_coding	Bloc1s6	ENSMUST00000148460	processed_transcript		2	1	122738519	2088
ENSMUSG00000034551	protein_coding	Hdx	ENSMUST00000113422	protein_coding	principal1	X	-1	111697079	9534
ENSMUSG00000029231	protein_coding	Pdgfra	ENSMUST00000202681	protein_coding		5	1	75152292	2876
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000148486	protein_coding	principal3	17	1	70522136	5276
ENSMUSG00000005804	protein_coding	Bloc1s6	ENSMUST00000146449	processed_transcript		2	1	122738527	354
ENSMUSG00000035266	protein_coding	Helq	ENSMUST00000139203	retained_intron		5	-1	100765438	984
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000128243	retained_intron		2	-1	156180212	1008
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000140728	protein_coding	alternative1	17	1	70522162	2173
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000108776	protein_coding	principal3	2	-1	181693810	1216
ENSMUSG00000035266	protein_coding	Helq	ENSMUST00000133845	protein_coding		5	-1	100798468	2969
ENSMUSG00000060613	protein_coding	Cyp2c70	ENSMUST00000164351	retained_intron		19	-1	40187333	769
ENSMUSG00000113623	transcribed_processed_pseudogene	Gm48691	ENSMUST00000221446	processed_transcript		13	-1	62417013	400
ENSMUSG00000005804	protein_coding	Bloc1s6	ENSMUST00000145037	processed_transcript		2	1	122738530	451
ENSMUSG00000027620	protein_coding	Rbm39	ENSMUST00000137340	retained_intron		2	-1	156180145	715
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000150260	retained_intron		17	1	70561552	2170
ENSMUSG00000005804	protein_coding	Bloc1s6	ENSMUST00000129690	processed_transcript		2	1	122738559	1108
ENSMUSG00000113812	TEC	Gm48699	ENSMUST00000220732	TEC		13	-1	62434390	1525
ENSMUSG00000034551	protein_coding	Hdx	ENSMUST00000038472	protein_coding		X	-1	111697079	9385
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000108771	protein_coding	alternative1	2	-1	181693810	1110
ENSMUSG00000035266	protein_coding	Helq	ENSMUST00000138417	retained_intron		5	-1	100766813	442
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000160139	protein_coding		13	1	97137937	843
ENSMUSG00000113841	TEC	Gm48701	ENSMUST00000221260	TEC		13	-1	62451609	2293
ENSMUSG00000054034	protein_coding	Tceal5	ENSMUST00000066819	protein_coding	principal1	X	-1	136203876	1044
ENSMUSG00000083898	processed_pseudogene	Gm7340	ENSMUST00000119729	processed_pseudogene		X	1	111571699	2752
ENSMUSG00000035266	protein_coding	Helq	ENSMUST00000155362	nonsense_mediated_decay		5	-1	100774036	832
ENSMUSG00000044526	protein_coding	Znrf4	ENSMUST00000052211	protein_coding	principal1	17	-1	56512431	1184
ENSMUSG00000113079	lincRNA	Gm48709	ENSMUST00000221790	lincRNA		12	1	84881824	1263
ENSMUSG00000054034	protein_coding	Tceal5	ENSMUST00000151592	protein_coding		X	-1	136203637	388
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000097288	protein_coding		17	1	70561552	2861
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000108778	protein_coding		2	-1	181691817	1427
ENSMUSG00000035266	protein_coding	Helq	ENSMUST00000135102	retained_intron		5	-1	100774120	520
ENSMUSG00000099528	lincRNA	2410012E07Rik	ENSMUST00000190896	lincRNA		14	1	70852933	1357
ENSMUSG00000054034	protein_coding	Tceal5	ENSMUST00000131510	protein_coding		X	-1	136203732	327
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000108772	protein_coding	alternative1	2	-1	181693947	779
ENSMUSG00000001632	protein_coding	Brpf1	ENSMUST00000113119	protein_coding	alternative1	6	1	113307192	4826
ENSMUSG00000003279	protein_coding	Dlgap1	ENSMUST00000233780	retained_intron		17	1	70809072	1738
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000124776	processed_transcript		2	-1	181693949	338
ENSMUSG00000110218	protein_coding	Gm20219	ENSMUST00000209718	protein_coding	principal1	17	-1	56554387	1269
ENSMUSG00000097282	antisense	5031415H12Rik	ENSMUST00000181546	antisense		17	-1	70755582	2481
ENSMUSG00000000673	protein_coding	Haao	ENSMUST00000000687	protein_coding	principal1	17	-1	83846749	1381
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000143510	processed_transcript		2	-1	181693631	833
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000108779	protein_coding		2	-1	181693920	642
ENSMUSG00000103314	processed_pseudogene	Gm38358	ENSMUST00000195144	processed_pseudogene		1	1	184695034	428
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000130712	processed_transcript		2	-1	181693907	266
ENSMUSG00000000673	protein_coding	Haao	ENSMUST00000234214	protein_coding		17	-1	83846812	777
ENSMUSG00000111482	lincRNA	Gm47153	ENSMUST00000214437	lincRNA		9	-1	46979053	568
ENSMUSG00000035266	protein_coding	Helq	ENSMUST00000152554	retained_intron		5	-1	100783000	637
ENSMUSG00000001632	protein_coding	Brpf1	ENSMUST00000113117	protein_coding	principal3	6	1	113307224	4540
ENSMUSG00000085354	lincRNA	Gm2044	ENSMUST00000130771	lincRNA		7	-1	139958039	911
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000144476	protein_coding		2	-1	181689500	424
ENSMUSG00000115745	processed_pseudogene	Gm46448	ENSMUST00000228189	processed_pseudogene		14	1	33432133	808
ENSMUSG00000002458	protein_coding	Rgs19	ENSMUST00000165416	protein_coding	principal3	2	-1	181691817	1427
ENSMUSG00000035266	protein_coding	Helq	ENSMUST00000198409	processed_transcript		5	-1	100792726	792
ENSMUSG00000000673	protein_coding	Haao	ENSMUST00000234863	nonsense_mediated_decay		17	-1	83846789	724
ENSMUSG00000115248	processed_pseudogene	Gm49037	ENSMUST00000227392	processed_pseudogene		14	-1	33429025	384
ENSMUSG00000001632	protein_coding	Brpf1	ENSMUST00000204626	protein_coding	alternative2	6	1	113307313	4381
ENSMUSG00000000673	protein_coding	Haao	ENSMUST00000234750	retained_intron		17	-1	83835968	538
ENSMUSG00000030047	protein_coding	Arhgap25	ENSMUST00000145128	retained_intron		6	-1	87496314	3816
ENSMUSG00000035266	protein_coding	Helq	ENSMUST00000151201	nonsense_mediated_decay		5	-1	100798577	1628
ENSMUSG00000001632	protein_coding	Brpf1	ENSMUST00000203577	protein_coding		6	1	113307429	4468
ENSMUSG00000092578	lincRNA	4930488B22Rik	ENSMUST00000172500	lincRNA		1	1	184712497	1722
ENSMUSG00000034858	protein_coding	Fam214a	ENSMUST00000215370	protein_coding	alternative2	9	1	74952964	4205
ENSMUSG00000000673	protein_coding	Haao	ENSMUST00000234823	retained_intron		17	-1	83847963	3118
ENSMUSG00000000673	protein_coding	Haao	ENSMUST00000234312	nonsense_mediated_decay		17	-1	83846756	329
ENSMUSG00000055228	protein_coding	Zfp935	ENSMUST00000076195	protein_coding	principal1	13	-1	62558511	1631
ENSMUSG00000035266	protein_coding	Helq	ENSMUST00000144948	retained_intron		5	-1	100793052	595
ENSMUSG00000034858	protein_coding	Fam214a	ENSMUST00000215355	processed_transcript		9	1	74953026	439
ENSMUSG00000027517	protein_coding	Ankrd60	ENSMUST00000239457	protein_coding	alternative2	2	-1	173578280	999
ENSMUSG00000027438	protein_coding	Napb	ENSMUST00000028926	protein_coding	principal1	2	-1	148732467	4412
ENSMUSG00000034858	protein_coding	Fam214a	ENSMUST00000214755	nonsense_mediated_decay		9	1	74953053	4065
ENSMUSG00000001632	protein_coding	Brpf1	ENSMUST00000124530	retained_intron		6	1	113317158	561
ENSMUSG00000027517	protein_coding	Ankrd60	ENSMUST00000109112	protein_coding	alternative2	2	-1	173578198	833
ENSMUSG00000113450	protein_coding	Gm49359	ENSMUST00000221747	protein_coding	principal1	13	-1	62466832	2492
ENSMUSG00000001632	protein_coding	Brpf1	ENSMUST00000138737	retained_intron		6	1	113320383	777
ENSMUSG00000034858	protein_coding	Fam214a	ENSMUST00000216125	retained_intron		9	1	74953072	484
ENSMUSG00000094893	protein_coding	Gm4791	ENSMUST00000178065	protein_coding	principal1	9	1	46998741	1021
ENSMUSG00000001632	protein_coding	Brpf1	ENSMUST00000131594	retained_intron		6	1	113320541	2747
ENSMUSG00000113450	protein_coding	Gm49359	ENSMUST00000223247	protein_coding		13	-1	62466806	1949
ENSMUSG00000027517	protein_coding	Ankrd60	ENSMUST00000147693	processed_transcript		2	-1	173578273	520
ENSMUSG00000113450	protein_coding	Gm49359	ENSMUST00000221951	processed_transcript		13	-1	62466793	692
ENSMUSG00000027438	protein_coding	Napb	ENSMUST00000136513	nonsense_mediated_decay		2	-1	148732413	4311
ENSMUSG00000113428	processed_pseudogene	Gm7664	ENSMUST00000221988	processed_pseudogene		13	-1	62528960	745
ENSMUSG00000034858	protein_coding	Fam214a	ENSMUST00000081746	protein_coding	principal4	9	1	74976111	3795
ENSMUSG00000111669	lincRNA	Gm31698	ENSMUST00000214227	lincRNA		9	-1	47165894	430
ENSMUSG00000027438	protein_coding	Napb	ENSMUST00000140647	retained_intron		2	-1	148732391	3087
ENSMUSG00000111669	lincRNA	Gm31698	ENSMUST00000214385	lincRNA		9	-1	47183646	527
ENSMUSG00000111669	lincRNA	Gm31698	ENSMUST00000217115	lincRNA		9	-1	47227095	690
ENSMUSG00000074865	protein_coding	Zfp934	ENSMUST00000221250	nonsense_mediated_decay		13	-1	62558635	1436
ENSMUSG00000085012	antisense	Gm15492	ENSMUST00000156734	antisense		6	-1	113326747	606
ENSMUSG00000092461	processed_pseudogene	Gm18833	ENSMUST00000173218	processed_pseudogene		17	1	38079620	862
ENSMUSG00000074865	protein_coding	Zfp934	ENSMUST00000222429	protein_coding		13	-1	62558607	1653
ENSMUSG00000027517	protein_coding	Ankrd60	ENSMUST00000119453	protein_coding	principal2	2	-1	173578341	1065
ENSMUSG00000074865	protein_coding	Zfp934	ENSMUST00000221494	processed_transcript		13	-1	62558612	1714
ENSMUSG00000034858	protein_coding	Fam214a	ENSMUST00000170846	protein_coding	alternative2	9	1	74953053	4355
ENSMUSG00000025473	protein_coding	Adam8	ENSMUST00000156647	retained_intron		7	-1	139988434	3089
ENSMUSG00000115952	processed_pseudogene	Gm18814	ENSMUST00000230093	processed_pseudogene		15	1	91074162	988
ENSMUSG00000074865	protein_coding	Zfp934	ENSMUST00000222746	protein_coding		13	-1	62558629	2206
ENSMUSG00000116424	processed_pseudogene	Gm7167	ENSMUST00000230136	processed_pseudogene		15	-1	91129897	1170
ENSMUSG00000074865	protein_coding	Zfp934	ENSMUST00000101547	protein_coding	principal1	13	-1	62558511	2147
ENSMUSG00000043312	protein_coding	Olfr131	ENSMUST00000216523	protein_coding	principal1	17	-1	38088693	1714
ENSMUSG00000043312	protein_coding	Olfr131	ENSMUST00000215940	protein_coding	principal1	17	-1	38088693	1614
ENSMUSG00000074865	protein_coding	Zfp934	ENSMUST00000220648	protein_coding		13	-1	62558599	2439
ENSMUSG00000031636	protein_coding	Pdlim3	ENSMUST00000034053	protein_coding	principal2	8	1	45885461	1604
ENSMUSG00000074865	protein_coding	Zfp934	ENSMUST00000222852	protein_coding		13	-1	62558595	677
ENSMUSG00000043312	protein_coding	Olfr131	ENSMUST00000172933	protein_coding	principal1	17	-1	38088693	1358
ENSMUSG00000074865	protein_coding	Zfp934	ENSMUST00000221303	processed_transcript		13	-1	62558629	943
ENSMUSG00000046873	protein_coding	Mbtps2	ENSMUST00000058098	protein_coding		X	-1	157598715	4797
ENSMUSG00000074865	protein_coding	Zfp934	ENSMUST00000221279	processed_transcript		13	-1	62571199	879
ENSMUSG00000074865	protein_coding	Zfp934	ENSMUST00000082203	protein_coding		13	-1	62520451	993
ENSMUSG00000043312	protein_coding	Olfr131	ENSMUST00000059560	protein_coding	principal1	17	-1	38082999	1030
ENSMUSG00000046873	protein_coding	Mbtps2	ENSMUST00000112522	protein_coding		X	-1	157598650	3891
ENSMUSG00000022024	protein_coding	Sugt1	ENSMUST00000054908	protein_coding	principal1	14	1	79587691	7392
ENSMUSG00000091476	protein_coding	Catspere2	ENSMUST00000191719	nonsense_mediated_decay		1	1	177983423	3033
ENSMUSG00000057349	protein_coding	Olfr948	ENSMUST00000216132	protein_coding	principal1	9	-1	39326045	4164
ENSMUSG00000031636	protein_coding	Pdlim3	ENSMUST00000211190	retained_intron		8	1	45885487	3537
ENSMUSG00000057349	protein_coding	Olfr948	ENSMUST00000076516	protein_coding	principal1	9	-1	39319612	966
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000171410	processed_transcript		2	1	166906040	708
ENSMUSG00000104621	TEC	Gm43185	ENSMUST00000197507	TEC		3	-1	152252803	2775
ENSMUSG00000067186	protein_coding	Olfr132	ENSMUST00000217361	processed_transcript		17	-1	38134526	1777
ENSMUSG00000046873	protein_coding	Mbtps2	ENSMUST00000134211	processed_transcript		X	-1	157579783	380
ENSMUSG00000031636	protein_coding	Pdlim3	ENSMUST00000210422	protein_coding	alternative1	8	1	45885520	1479
ENSMUSG00000067186	protein_coding	Olfr132	ENSMUST00000216804	protein_coding	principal1	17	-1	38134526	1913
ENSMUSG00000022024	protein_coding	Sugt1	ENSMUST00000228675	retained_intron		14	1	79587809	897
ENSMUSG00000067186	protein_coding	Olfr132	ENSMUST00000087128	protein_coding	principal1	17	-1	38131190	942
ENSMUSG00000031636	protein_coding	Pdlim3	ENSMUST00000209216	retained_intron		8	1	45915032	754
ENSMUSG00000022024	protein_coding	Sugt1	ENSMUST00000228669	processed_transcript		14	1	79603469	522
ENSMUSG00000111622	processed_pseudogene	Gm21041	ENSMUST00000214829	processed_pseudogene		9	1	39326728	823
ENSMUSG00000039377	protein_coding	Hlx	ENSMUST00000048572	protein_coding	principal1	1	-1	184732619	2278
ENSMUSG00000110780	polymorphic_pseudogene	Olfr949-ps1	ENSMUST00000215546	polymorphic_pseudogene	principal1	9	1	39364561	949
ENSMUSG00000022024	protein_coding	Sugt1	ENSMUST00000227497	processed_transcript		14	1	79619707	508
ENSMUSG00000111430	unprocessed_pseudogene	Olfr950-ps1	ENSMUST00000213804	unprocessed_pseudogene		9	1	39383330	878
ENSMUSG00000046873	protein_coding	Mbtps2	ENSMUST00000139786	retained_intron		X	-1	157598651	2379
ENSMUSG00000022024	protein_coding	Sugt1	ENSMUST00000226320	processed_transcript		14	1	79624639	510
ENSMUSG00000022032	protein_coding	Scara5	ENSMUST00000022610	protein_coding	principal1	14	1	65666403	3794
ENSMUSG00000039377	protein_coding	Hlx	ENSMUST00000174257	protein_coding		1	-1	184731598	712
ENSMUSG00000063240	protein_coding	Olfr133	ENSMUST00000215078	protein_coding	principal1	17	1	38145281	3130
ENSMUSG00000063240	protein_coding	Olfr133	ENSMUST00000215549	protein_coding	principal1	17	1	38145382	2944
ENSMUSG00000022032	protein_coding	Scara5	ENSMUST00000069226	protein_coding		14	1	65666437	3262
ENSMUSG00000109844	lincRNA	Gm31816	ENSMUST00000211355	lincRNA		9	-1	47270743	448
ENSMUSG00000109844	lincRNA	Gm31816	ENSMUST00000209591	lincRNA		9	-1	47362770	1332
ENSMUSG00000063240	protein_coding	Olfr133	ENSMUST00000173610	protein_coding		17	1	38145393	553
ENSMUSG00000109844	lincRNA	Gm31816	ENSMUST00000210492	lincRNA		9	-1	47362770	751
ENSMUSG00000046873	protein_coding	Mbtps2	ENSMUST00000149249	protein_coding		X	-1	157598679	529
ENSMUSG00000109844	lincRNA	Gm31816	ENSMUST00000209388	lincRNA		9	-1	47368649	1294
ENSMUSG00000109844	lincRNA	Gm31816	ENSMUST00000210151	lincRNA		9	-1	47362750	1304
ENSMUSG00000032936	protein_coding	Camkv	ENSMUST00000035700	protein_coding	principal1	9	1	107935674	3277
ENSMUSG00000044312	protein_coding	Neurog3	ENSMUST00000050103	protein_coding	principal1	10	1	62133090	1540
ENSMUSG00000063240	protein_coding	Olfr133	ENSMUST00000113636	protein_coding	principal1	17	1	38148501	1090
ENSMUSG00000109844	lincRNA	Gm31816	ENSMUST00000209906	lincRNA		9	-1	47368616	634
ENSMUSG00000046873	protein_coding	Mbtps2	ENSMUST00000152826	retained_intron		X	-1	157598643	796
ENSMUSG00000022032	protein_coding	Scara5	ENSMUST00000154373	processed_transcript		14	1	65676477	3179
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000168166	protein_coding	principal2	9	1	75037614	3944
ENSMUSG00000044312	protein_coding	Neurog3	ENSMUST00000218121	protein_coding		10	1	62133098	553
ENSMUSG00000044312	protein_coding	Neurog3	ENSMUST00000218216	retained_intron		10	1	62133175	1259
ENSMUSG00000046873	protein_coding	Mbtps2	ENSMUST00000179062	protein_coding	principal1	X	-1	157598650	3890
ENSMUSG00000094269	protein_coding	Olfr951	ENSMUST00000216107	protein_coding	alternative2	9	1	39387410	1947
ENSMUSG00000094269	protein_coding	Olfr951	ENSMUST00000078531	protein_coding	principal2	9	1	39393793	945
ENSMUSG00000055884	protein_coding	Fancm	ENSMUST00000058889	protein_coding	principal1	12	1	65075606	7775
ENSMUSG00000082002	processed_pseudogene	Gm6568	ENSMUST00000122274	processed_pseudogene		X	1	157540866	697
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000169448	retained_intron		9	1	75037677	610
ENSMUSG00000091736	protein_coding	Yy2	ENSMUST00000065806	protein_coding	principal1	X	-1	157568985	2867
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000170308	protein_coding	principal2	9	1	75037677	429
ENSMUSG00000050071	protein_coding	Bex1	ENSMUST00000058125	protein_coding	principal1	X	-1	136215513	866
ENSMUSG00000096009	protein_coding	Olfr134	ENSMUST00000215900	protein_coding	principal1	17	1	38171388	1670
ENSMUSG00000096009	protein_coding	Olfr134	ENSMUST00000074883	protein_coding	principal1	17	1	38175086	939
ENSMUSG00000050071	protein_coding	Bex1	ENSMUST00000113120	protein_coding	principal1	X	-1	136215443	718
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000164467	nonsense_mediated_decay		9	1	75037679	1047
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000149469	protein_coding		1	1	86018068	1110
ENSMUSG00000055884	protein_coding	Fancm	ENSMUST00000222540	nonsense_mediated_decay		12	1	65075606	7816
ENSMUSG00000041329	protein_coding	Atp1b2	ENSMUST00000047889	protein_coding	principal1	11	-1	69605829	2842
ENSMUSG00000058856	protein_coding	Olfr952	ENSMUST00000073895	protein_coding	principal1	9	-1	39427148	1056
ENSMUSG00000050071	protein_coding	Bex1	ENSMUST00000113118	protein_coding	principal1	X	-1	136215484	754
ENSMUSG00000055884	protein_coding	Fancm	ENSMUST00000223401	retained_intron		12	1	65075607	4050
ENSMUSG00000055884	protein_coding	Fancm	ENSMUST00000221937	protein_coding		12	1	65093738	325
ENSMUSG00000057801	protein_coding	Olfr135	ENSMUST00000213217	protein_coding	principal1	17	1	38204335	2917
ENSMUSG00000050071	protein_coding	Bex1	ENSMUST00000142172	retained_intron		X	-1	136215380	481
ENSMUSG00000032936	protein_coding	Camkv	ENSMUST00000192318	retained_intron		9	1	107935898	3253
ENSMUSG00000055884	protein_coding	Fancm	ENSMUST00000222521	retained_intron		12	1	65102311	542
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000007800	protein_coding	principal2	9	1	75037718	4046
ENSMUSG00000032936	protein_coding	Camkv	ENSMUST00000193533	nonsense_mediated_decay		9	1	107935908	534
ENSMUSG00000057801	protein_coding	Olfr135	ENSMUST00000076245	protein_coding	principal1	17	1	38208169	1079
ENSMUSG00000055884	protein_coding	Fancm	ENSMUST00000221838	protein_coding		12	1	65106573	502
ENSMUSG00000055884	protein_coding	Fancm	ENSMUST00000222086	retained_intron		12	1	65118232	563
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000168301	protein_coding		9	1	75037749	599
ENSMUSG00000055884	protein_coding	Fancm	ENSMUST00000221175	protein_coding		12	1	65124858	621
ENSMUSG00000041329	protein_coding	Atp1b2	ENSMUST00000130394	processed_transcript		11	-1	69605942	3751
ENSMUSG00000079428	protein_coding	Tceal7	ENSMUST00000126811	protein_coding		X	1	136214779	453
ENSMUSG00000032936	protein_coding	Camkv	ENSMUST00000195219	protein_coding		9	1	107937300	405
ENSMUSG00000114157	TEC	Gm47870	ENSMUST00000223519	TEC		12	-1	65076315	1326
ENSMUSG00000112992	processed_pseudogene	Gm47869	ENSMUST00000223249	processed_pseudogene		12	-1	65100006	163
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000167885	protein_coding	alternative1	9	1	75037819	540
ENSMUSG00000041329	protein_coding	Atp1b2	ENSMUST00000138694	protein_coding		11	-1	69602741	993
ENSMUSG00000118366	lincRNA	9130016M20Rik	ENSMUST00000237398	lincRNA		19	1	31950084	2278
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000169188	protein_coding		9	1	75037917	216
ENSMUSG00000032936	protein_coding	Camkv	ENSMUST00000194206	protein_coding		9	1	107945259	2827
ENSMUSG00000041329	protein_coding	Atp1b2	ENSMUST00000144425	processed_transcript		11	-1	69603613	711
ENSMUSG00000079428	protein_coding	Tceal7	ENSMUST00000113116	protein_coding	principal1	X	1	136224041	971
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000170310	protein_coding	alternative1	9	1	75051977	899
ENSMUSG00000041329	protein_coding	Atp1b2	ENSMUST00000153198	processed_transcript		11	-1	69603162	824
ENSMUSG00000029231	protein_coding	Pdgfra	ENSMUST00000000476	protein_coding	principal1	5	1	75152306	6549
ENSMUSG00000029231	protein_coding	Pdgfra	ENSMUST00000202186	non_stop_decay		5	1	75152352	1561
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000166549	protein_coding	alternative1	9	1	75052051	1747
ENSMUSG00000007656	protein_coding	Arpp19	ENSMUST00000169492	protein_coding		9	1	75037614	3963
ENSMUSG00000029231	protein_coding	Pdgfra	ENSMUST00000201711	protein_coding		5	1	75152935	4088
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000052854	protein_coding	alternative2	1	1	86021942	1107
ENSMUSG00000029231	protein_coding	Pdgfra	ENSMUST00000201241	retained_intron		5	1	75153586	603
ENSMUSG00000016541	protein_coding	Atxn10	ENSMUST00000163242	protein_coding	principal1	15	1	85336245	1937
ENSMUSG00000029231	protein_coding	Pdgfra	ENSMUST00000202161	protein_coding		5	1	75155076	442
ENSMUSG00000048450	protein_coding	Msx1	ENSMUST00000063116	protein_coding	principal1	5	-1	37824583	1935
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000125083	protein_coding		1	1	86021943	704
ENSMUSG00000091476	protein_coding	Catspere2	ENSMUST00000094273	protein_coding		1	1	177991435	1663
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000142796	protein_coding	principal1	10	-1	62111050	1135
ENSMUSG00000048450	protein_coding	Msx1	ENSMUST00000183013	retained_intron		5	-1	37824582	1880
ENSMUSG00000042712	protein_coding	Tceal9	ENSMUST00000048687	protein_coding	principal1	X	1	136245079	1019
ENSMUSG00000042712	protein_coding	Tceal9	ENSMUST00000113115	protein_coding	principal1	X	1	136245683	888
ENSMUSG00000091476	protein_coding	Catspere2	ENSMUST00000239149	nonsense_mediated_decay		1	1	177991435	3453
ENSMUSG00000096607	protein_coding	7530416G11Rik	ENSMUST00000178942	protein_coding	principal1	15	-1	85503227	1161
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000176037	processed_transcript		9	1	107975505	415
ENSMUSG00000029231	protein_coding	Pdgfra	ENSMUST00000168162	protein_coding	principal1	5	1	75155899	6834
ENSMUSG00000063548	processed_pseudogene	Gm4825	ENSMUST00000079690	processed_pseudogene		15	1	85510812	408
ENSMUSG00000091476	protein_coding	Catspere2	ENSMUST00000192146	nonsense_mediated_decay		1	1	177991436	3494
ENSMUSG00000081415	processed_pseudogene	Gm15176	ENSMUST00000117734	processed_pseudogene		X	-1	157604167	135
ENSMUSG00000091476	protein_coding	Catspere2	ENSMUST00000238506	protein_coding	principal1	1	1	177991436	3426
ENSMUSG00000083636	processed_pseudogene	Gm15175	ENSMUST00000117629	processed_pseudogene		X	1	157604351	132
ENSMUSG00000029231	protein_coding	Pdgfra	ENSMUST00000202992	protein_coding		5	1	75156833	615
ENSMUSG00000091476	protein_coding	Catspere2	ENSMUST00000239155	protein_coding		1	1	177991436	3494
ENSMUSG00000029231	protein_coding	Pdgfra	ENSMUST00000200822	protein_coding		5	1	75161834	1138
ENSMUSG00000081222	processed_pseudogene	Gm15173	ENSMUST00000122049	processed_pseudogene		X	-1	157613121	433
ENSMUSG00000102493	unprocessed_pseudogene	Gm8010	ENSMUST00000194128	unprocessed_pseudogene		1	1	178143301	873
ENSMUSG00000081505	processed_pseudogene	Gm8644	ENSMUST00000118619	processed_pseudogene		X	-1	157651299	596
ENSMUSG00000107245	TEC	Gm42803	ENSMUST00000201051	TEC		5	-1	75155335	451
ENSMUSG00000104097	unprocessed_pseudogene	Gm37313	ENSMUST00000191673	unprocessed_pseudogene		1	-1	177998739	290
ENSMUSG00000083117	processed_pseudogene	Gm15171	ENSMUST00000122191	processed_pseudogene		X	1	157663598	334
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000125704	protein_coding	principal1	10	-1	62111050	1769
ENSMUSG00000083166	processed_pseudogene	Gm8648	ENSMUST00000122457	processed_pseudogene		X	-1	157667785	221
ENSMUSG00000106760	antisense	Gm42802	ENSMUST00000202475	antisense		5	-1	75153653	456
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000120143	protein_coding		3	-1	9004723	6317
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000124615	protein_coding	principal1	10	-1	62110968	1493
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000142821	protein_coding	principal1	10	-1	62110945	1283
ENSMUSG00000020140	protein_coding	Lgr5	ENSMUST00000020350	protein_coding	principal1	10	-1	115587780	4714
ENSMUSG00000055782	protein_coding	Abcd2	ENSMUST00000069511	protein_coding	principal1	15	-1	91191799	5532
ENSMUSG00000020140	protein_coding	Lgr5	ENSMUST00000172806	protein_coding		10	-1	115587493	2652
ENSMUSG00000020140	protein_coding	Lgr5	ENSMUST00000173740	protein_coding		10	-1	115587493	2508
ENSMUSG00000055782	protein_coding	Abcd2	ENSMUST00000229909	processed_transcript		15	-1	91172185	320
ENSMUSG00000055782	protein_coding	Abcd2	ENSMUST00000230461	retained_intron		15	-1	91190698	528
ENSMUSG00000020140	protein_coding	Lgr5	ENSMUST00000173619	retained_intron		10	-1	115458999	631
ENSMUSG00000022025	protein_coding	Cnmd	ENSMUST00000165835	protein_coding	alternative2	14	-1	79662084	1362
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000141724	protein_coding		10	-1	62143906	645
ENSMUSG00000020140	protein_coding	Lgr5	ENSMUST00000144732	retained_intron		10	-1	115463079	560
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000138450	processed_transcript		10	-1	62143920	376
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000150057	protein_coding		10	-1	62143910	497
ENSMUSG00000055177	protein_coding	Cstl1	ENSMUST00000109955	protein_coding	principal1	2	1	148750358	668
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000027719	protein_coding		10	-1	62139870	771
ENSMUSG00000022025	protein_coding	Cnmd	ENSMUST00000022603	protein_coding	principal3	14	-1	79662170	1433
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000156798	protein_coding		10	-1	62134706	652
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000114430	protein_coding	alternative2	X	-1	73869905	5126
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000141144	protein_coding		10	-1	62110496	594
ENSMUSG00000055177	protein_coding	Cstl1	ENSMUST00000109954	protein_coding		2	1	148750361	454
ENSMUSG00000022025	protein_coding	Cnmd	ENSMUST00000165204	retained_intron		14	-1	79642195	659
ENSMUSG00000055177	protein_coding	Cstl1	ENSMUST00000109952	protein_coding	principal1	2	1	148750396	629
ENSMUSG00000020083	protein_coding	Fam241b	ENSMUST00000064050	protein_coding	principal1	10	-1	62111013	1096
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000152501	protein_coding		1	1	86021946	743
ENSMUSG00000020140	protein_coding	Lgr5	ENSMUST00000105272	retained_intron		10	-1	115587759	4793
ENSMUSG00000022025	protein_coding	Cnmd	ENSMUST00000172331	processed_transcript		14	-1	79645510	459
ENSMUSG00000022759	protein_coding	Lrrc74b	ENSMUST00000100123	protein_coding	principal1	16	-1	17561247	2231
ENSMUSG00000020140	protein_coding	Lgr5	ENSMUST00000149008	retained_intron		10	-1	115587759	2781
ENSMUSG00000022025	protein_coding	Cnmd	ENSMUST00000167524	retained_intron		14	-1	79645658	372
ENSMUSG00000022759	protein_coding	Lrrc74b	ENSMUST00000023442	protein_coding		16	-1	17561247	2135
ENSMUSG00000020140	protein_coding	Lgr5	ENSMUST00000129309	processed_transcript		10	-1	115587743	607
ENSMUSG00000115740	lincRNA	Gm49042	ENSMUST00000226962	lincRNA		14	-1	79702410	820
ENSMUSG00000081169	unprocessed_pseudogene	Gm12551	ENSMUST00000122073	unprocessed_pseudogene		4	-1	86631251	726
ENSMUSG00000078932	protein_coding	CN725425	ENSMUST00000190436	protein_coding	principal5	15	1	91199494	2041
ENSMUSG00000110071	TEC	Gm45512	ENSMUST00000210432	TEC		8	1	45920872	1553
ENSMUSG00000078932	protein_coding	CN725425	ENSMUST00000109284	protein_coding	alternative2	15	1	91231578	1929
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000113344	protein_coding	principal3	1	1	86021946	1047
ENSMUSG00000047045	protein_coding	Tmem164	ENSMUST00000112889	protein_coding		X	1	142681406	1742
ENSMUSG00000115422	lincRNA	4930452G13Rik	ENSMUST00000226347	lincRNA		14	1	79702920	1080
ENSMUSG00000022759	protein_coding	Lrrc74b	ENSMUST00000232230	processed_transcript		16	-1	17554432	1739
ENSMUSG00000115422	lincRNA	4930452G13Rik	ENSMUST00000227328	lincRNA		14	1	79703712	2758
ENSMUSG00000117785	processed_pseudogene	Gm5827	ENSMUST00000236239	processed_pseudogene		19	1	40191038	1375
ENSMUSG00000111027	processed_pseudogene	Gm2981	ENSMUST00000213947	processed_pseudogene		9	-1	75062047	694
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000130504	protein_coding	principal3	1	1	86021946	1100
ENSMUSG00000092210	protein_coding	A930009A15Rik	ENSMUST00000173620	protein_coding	principal1	10	1	115569986	1001
ENSMUSG00000022759	protein_coding	Lrrc74b	ENSMUST00000232637	protein_coding		16	-1	17561244	1539
ENSMUSG00000024347	protein_coding	Psd2	ENSMUST00000115716	protein_coding	principal3	18	1	35964830	4607
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000153247	protein_coding		1	1	86021953	884
ENSMUSG00000062588	processed_pseudogene	Gm6104	ENSMUST00000078030	processed_pseudogene		1	-1	4880651	603
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000159876	protein_coding	alternative2	1	1	86021960	760
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000102871	protein_coding	principal2	X	-1	73880834	5113
ENSMUSG00000057443	protein_coding	Olfr138	ENSMUST00000173841	protein_coding	principal1	17	1	38261035	1865
ENSMUSG00000038025	protein_coding	Phf2	ENSMUST00000035540	protein_coding	principal1	13	-1	48871119	5494
ENSMUSG00000018541	protein_coding	Cwc25	ENSMUST00000124356	processed_transcript		11	-1	97751170	2450
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000135440	protein_coding		1	1	86021961	732
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000066576	protein_coding	alternative2	X	-1	73869804	4116
ENSMUSG00000057443	protein_coding	Olfr138	ENSMUST00000172843	protein_coding	principal1	17	1	38261068	1769
ENSMUSG00000024347	protein_coding	Psd2	ENSMUST00000176873	protein_coding	alternative2	18	1	35965065	4375
ENSMUSG00000086889	antisense	Phf2os1	ENSMUST00000123212	antisense		13	1	48871112	498
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000144478	retained_intron		X	-1	73856394	705
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000124560	protein_coding		X	-1	73856762	466
ENSMUSG00000026226	protein_coding	Spata3	ENSMUST00000131151	protein_coding		1	1	86022105	614
ENSMUSG00000057443	protein_coding	Olfr138	ENSMUST00000071871	protein_coding	principal1	17	1	38274773	939
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000145805	retained_intron		X	-1	73857664	813
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000135104	retained_intron		X	-1	73857414	627
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000091355	protein_coding		3	-1	9004478	3081
ENSMUSG00000022429	protein_coding	Dmc1	ENSMUST00000023065	protein_coding	principal1	15	-1	79605108	2219
ENSMUSG00000110985	unprocessed_pseudogene	Olfr953-ps1	ENSMUST00000214463	unprocessed_pseudogene		9	1	39452295	892
ENSMUSG00000002885	protein_coding	Adgre5	ENSMUST00000166939	protein_coding		8	-1	83741326	2980
ENSMUSG00000024347	protein_coding	Psd2	ENSMUST00000177432	protein_coding	alternative2	18	1	35965067	4367
ENSMUSG00000047045	protein_coding	Tmem164	ENSMUST00000101198	protein_coding		X	1	142681415	4443
ENSMUSG00000118557	processed_pseudogene	AC153941.1	ENSMUST00000239006	processed_pseudogene		10	-1	59220310	425
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000130110	retained_intron		X	-1	73858633	856
ENSMUSG00000047045	protein_coding	Tmem164	ENSMUST00000112891	protein_coding		X	1	142681415	1654
ENSMUSG00000024347	protein_coding	Psd2	ENSMUST00000176472	nonsense_mediated_decay		18	1	35965102	4123
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000155246	retained_intron		X	-1	73860155	661
ENSMUSG00000071104	protein_coding	Ccdc110	ENSMUST00000095326	protein_coding	principal1	8	1	45934619	2656
ENSMUSG00000030249	protein_coding	Abcc9	ENSMUST00000100827	protein_coding	alternative2	6	-1	142702218	7306
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000148250	protein_coding		X	-1	73861123	570
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000154090	processed_transcript		9	1	44767908	771
ENSMUSG00000024347	protein_coding	Psd2	ENSMUST00000175734	protein_coding	alternative2	18	1	35965105	4300
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000091354	protein_coding	alternative1	3	-1	8964046	2193
ENSMUSG00000115131	TEC	Gm49268	ENSMUST00000227490	TEC		15	1	26688400	3268
ENSMUSG00000022429	protein_coding	Dmc1	ENSMUST00000230011	nonsense_mediated_decay		15	-1	79605109	1772
ENSMUSG00000024347	protein_coding	Psd2	ENSMUST00000175720	retained_intron		18	1	35987019	674
ENSMUSG00000071104	protein_coding	Ccdc110	ENSMUST00000174815	nonsense_mediated_decay		8	1	45934642	633
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000002790	protein_coding	principal1	2	1	166906059	3641
ENSMUSG00000115301	transcribed_processed_pseudogene	Gm6330	ENSMUST00000228390	processed_transcript		15	-1	26730767	2498
ENSMUSG00000115301	transcribed_processed_pseudogene	Gm6330	ENSMUST00000226313	transcribed_processed_pseudogene		15	-1	26729715	1245
ENSMUSG00000022429	protein_coding	Dmc1	ENSMUST00000229408	protein_coding		15	-1	79605099	1931
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000129612	retained_intron		X	-1	73880795	1351
ENSMUSG00000068245	protein_coding	Phf11d	ENSMUST00000095157	protein_coding	principal2	14	-1	59365470	2666
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000141221	processed_transcript		X	-1	73896105	598
ENSMUSG00000115381	TEC	Gm49266	ENSMUST00000227799	TEC		15	-1	26746137	2906
ENSMUSG00000031391	protein_coding	L1cam	ENSMUST00000146790	protein_coding		X	-1	73870279	571
ENSMUSG00000022429	protein_coding	Dmc1	ENSMUST00000229472	retained_intron		15	-1	79585896	751
ENSMUSG00000044456	protein_coding	Rin3	ENSMUST00000056950	protein_coding	principal3	12	1	102283048	3892
ENSMUSG00000022429	protein_coding	Dmc1	ENSMUST00000230121	processed_transcript		15	-1	79585250	457
ENSMUSG00000044456	protein_coding	Rin3	ENSMUST00000101114	protein_coding		12	1	102283167	2394
ENSMUSG00000043556	protein_coding	Fbxl7	ENSMUST00000059204	protein_coding	principal1	15	-1	26895580	4632
ENSMUSG00000044456	protein_coding	Rin3	ENSMUST00000150795	protein_coding		12	1	102283168	937
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000139105	processed_transcript		X	-1	73919862	551
ENSMUSG00000043556	protein_coding	Fbxl7	ENSMUST00000226377	retained_intron		15	-1	26895518	2490
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000094381	protein_coding	principal4	3	-1	8964048	1074
ENSMUSG00000068245	protein_coding	Phf11d	ENSMUST00000161754	retained_intron		14	-1	59365440	2973
ENSMUSG00000115399	TEC	9430068D22Rik	ENSMUST00000227714	TEC		15	-1	26645289	655
ENSMUSG00000036298	protein_coding	Slc2a13	ENSMUST00000109283	protein_coding	principal1	15	-1	91573261	6536
ENSMUSG00000030249	protein_coding	Abcc9	ENSMUST00000087527	protein_coding	principal5	6	-1	142702218	6213
ENSMUSG00000115647	TEC	Gm49265	ENSMUST00000227068	TEC		15	-1	26674753	1817
ENSMUSG00000044456	protein_coding	Rin3	ENSMUST00000133820	protein_coding	alternative2	12	1	102283641	3755
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000169290	nonsense_mediated_decay		2	1	166906111	3087
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000168599	protein_coding		2	1	166915180	2748
ENSMUSG00000068245	protein_coding	Phf11d	ENSMUST00000160425	protein_coding	alternative2	14	-1	59365444	1281
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000121038	protein_coding		3	-1	8993890	849
ENSMUSG00000002885	protein_coding	Adgre5	ENSMUST00000002964	protein_coding		8	-1	83741326	2986
ENSMUSG00000115433	antisense	Gm49267	ENSMUST00000228205	antisense		15	1	26609503	639
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000163437	protein_coding		2	1	166927530	1992
ENSMUSG00000031105	protein_coding	Slc25a14	ENSMUST00000128773	processed_transcript		X	1	48623413	738
ENSMUSG00000068245	protein_coding	Phf11d	ENSMUST00000161031	protein_coding	alternative2	14	-1	59365410	1130
ENSMUSG00000044456	protein_coding	Rin3	ENSMUST00000137249	processed_transcript		12	1	102354745	444
ENSMUSG00000036298	protein_coding	Slc2a13	ENSMUST00000156971	processed_transcript		15	-1	91412217	479
ENSMUSG00000112896	lincRNA	Gm8633	ENSMUST00000218457	lincRNA		10	-1	98351874	558
ENSMUSG00000044456	protein_coding	Rin3	ENSMUST00000131076	processed_transcript		12	1	102354745	472
ENSMUSG00000085314	processed_transcript	Gm14866	ENSMUST00000149206	processed_transcript		X	-1	100740929	2118
ENSMUSG00000036298	protein_coding	Slc2a13	ENSMUST00000109282	processed_transcript		15	-1	91573194	2081
ENSMUSG00000112457	processed_pseudogene	Gm48687	ENSMUST00000220324	processed_pseudogene		10	1	98301019	235
ENSMUSG00000102158	lincRNA	Gm34342	ENSMUST00000192139	lincRNA		1	1	184736977	335
ENSMUSG00000081771	processed_pseudogene	Gm15381	ENSMUST00000121501	processed_pseudogene		15	-1	91557917	1156
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000063496	protein_coding		3	-1	9004439	697
ENSMUSG00000030249	protein_coding	Abcc9	ENSMUST00000205202	protein_coding	alternative2	6	-1	142702273	4752
ENSMUSG00000084240	processed_pseudogene	Gm15383	ENSMUST00000121889	processed_pseudogene		15	-1	91532366	1443
ENSMUSG00000111755	TEC	Gm47160	ENSMUST00000214343	TEC		9	-1	47474918	1870
ENSMUSG00000044456	protein_coding	Rin3	ENSMUST00000139686	retained_intron		12	1	102354780	663
ENSMUSG00000030249	protein_coding	Abcc9	ENSMUST00000204870	protein_coding		6	-1	142702315	1458
ENSMUSG00000046432	protein_coding	Bex3	ENSMUST00000053540	protein_coding	principal3	X	1	136270261	930
ENSMUSG00000111703	TEC	Gm47161	ENSMUST00000216279	TEC		9	-1	47486506	4879
ENSMUSG00000086160	lincRNA	4933438A12Rik	ENSMUST00000144579	lincRNA		15	1	91597583	1013
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000145905	protein_coding		3	-1	8962253	698
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000132402	retained_intron		2	1	166927565	801
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000134788	protein_coding		3	-1	9004478	673
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000135139	retained_intron		2	1	166927724	760
ENSMUSG00000019359	protein_coding	Gdpd2	ENSMUST00000144912	processed_transcript		X	1	100729873	362
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000166871	processed_transcript		2	1	166927768	708
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000124956	protein_coding		3	-1	8988636	561
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000145819	retained_intron		2	1	166934755	1587
ENSMUSG00000019359	protein_coding	Gdpd2	ENSMUST00000156336	retained_intron		X	1	100729938	2858
ENSMUSG00000018541	protein_coding	Cwc25	ENSMUST00000018685	protein_coding	principal2	11	-1	97766556	3105
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000164974	nonsense_mediated_decay		2	1	166934782	718
ENSMUSG00000041476	protein_coding	Smpx	ENSMUST00000038007	nonsense_mediated_decay		X	1	157698910	1152
ENSMUSG00000018541	protein_coding	Cwc25	ENSMUST00000152395	protein_coding		11	-1	97752710	686
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000129736	processed_transcript		3	-1	9004437	419
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000163917	retained_intron		2	1	166937093	380
ENSMUSG00000041476	protein_coding	Smpx	ENSMUST00000136141	protein_coding		X	1	157698910	585
ENSMUSG00000030249	protein_coding	Abcc9	ENSMUST00000073173	protein_coding	alternative2	6	-1	142702274	7433
ENSMUSG00000018541	protein_coding	Cwc25	ENSMUST00000107579	protein_coding	alternative2	11	-1	97766540	1838
ENSMUSG00000027506	protein_coding	Tpd52	ENSMUST00000155450	nonsense_mediated_decay		3	-1	9004478	409
ENSMUSG00000002718	protein_coding	Cse1l	ENSMUST00000129061	retained_intron		2	1	166940833	896
ENSMUSG00000046432	protein_coding	Bex3	ENSMUST00000113112	protein_coding	alternative2	X	1	136270305	826
ENSMUSG00000002885	protein_coding	Adgre5	ENSMUST00000075843	protein_coding	principal3	8	-1	83741169	3000
ENSMUSG00000041476	protein_coding	Smpx	ENSMUST00000112520	protein_coding	principal1	X	1	157702598	503
ENSMUSG00000030249	protein_coding	Abcc9	ENSMUST00000111771	protein_coding	alternative2	6	-1	142702274	7499
ENSMUSG00000090397	antisense	Gm17096	ENSMUST00000172037	antisense		2	1	166943539	733
ENSMUSG00000046432	protein_coding	Bex3	ENSMUST00000113113	protein_coding	principal3	X	1	136270775	766
ENSMUSG00000097254	lincRNA	C430042M11Rik	ENSMUST00000180515	lincRNA		17	-1	83854393	1617
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000035216	protein_coding	principal1	9	1	107975534	3195
ENSMUSG00000097254	lincRNA	C430042M11Rik	ENSMUST00000234697	lincRNA		17	-1	83854418	1427
ENSMUSG00000041476	protein_coding	Smpx	ENSMUST00000147283	nonsense_mediated_decay		X	1	157699260	465
ENSMUSG00000047045	protein_coding	Tmem164	ENSMUST00000087333	protein_coding	principal1	X	1	142681418	5149
ENSMUSG00000114615	lincRNA	Gm48370	ENSMUST00000224264	lincRNA		14	1	9400624	473
ENSMUSG00000117442	lincRNA	1810073O08Rik	ENSMUST00000234364	lincRNA		17	1	83917937	1853
ENSMUSG00000112052	processed_pseudogene	Gm17917	ENSMUST00000218561	processed_pseudogene		10	1	27280718	953
ENSMUSG00000046432	protein_coding	Bex3	ENSMUST00000178632	protein_coding	principal3	X	1	136270253	933
ENSMUSG00000114298	lincRNA	Gm48371	ENSMUST00000224617	lincRNA		14	-1	9469555	457
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000106939	protein_coding	principal3	11	1	105178807	5494
ENSMUSG00000101391	protein_coding	Olfr1217	ENSMUST00000213669	protein_coding	principal1	2	-1	89029953	3839
ENSMUSG00000112804	processed_pseudogene	Gm30534	ENSMUST00000217928	processed_pseudogene		10	1	26966085	207
ENSMUSG00000112751	antisense	Gm48084	ENSMUST00000220276	antisense		10	1	26949740	909
ENSMUSG00000117421	lincRNA	Gm41639	ENSMUST00000234343	lincRNA		17	-1	83952463	768
ENSMUSG00000101391	protein_coding	Olfr1217	ENSMUST00000214022	protein_coding	principal1	2	-1	89032065	3947
ENSMUSG00000041476	protein_coding	Smpx	ENSMUST00000112521	protein_coding	principal1	X	1	157699127	898
ENSMUSG00000027018	protein_coding	Hat1	ENSMUST00000112122	protein_coding		2	1	71388958	1899
ENSMUSG00000002885	protein_coding	Adgre5	ENSMUST00000109802	protein_coding	alternative2	8	-1	83741173	2867
ENSMUSG00000117611	lincRNA	Gm35229	ENSMUST00000234776	lincRNA		17	1	83956248	515
ENSMUSG00000101391	protein_coding	Olfr1217	ENSMUST00000216592	protein_coding	principal1	2	-1	89029951	3992
ENSMUSG00000101636	antisense	4930579H20Rik	ENSMUST00000187815	antisense		10	1	27389866	1516
ENSMUSG00000094035	protein_coding	Ldlrad2	ENSMUST00000238480	processed_transcript		4	-1	137575180	1828
ENSMUSG00000027018	protein_coding	Hat1	ENSMUST00000144888	processed_transcript		2	1	71408988	285
ENSMUSG00000103931	TEC	Gm36962	ENSMUST00000192114	TEC		10	-1	27615328	1761
ENSMUSG00000041476	protein_coding	Smpx	ENSMUST00000132805	retained_intron		X	1	157714273	590
ENSMUSG00000094035	protein_coding	Ldlrad2	ENSMUST00000238941	protein_coding	alternative2	4	-1	137582104	1183
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000126054	retained_intron		11	1	105180746	428
ENSMUSG00000117564	lincRNA	Gm41638	ENSMUST00000234390	lincRNA		17	-1	83960930	240
ENSMUSG00000019917	protein_coding	Septin10	ENSMUST00000220156	protein_coding	alternative2	10	-1	59221847	1821
ENSMUSG00000112472	processed_pseudogene	Gm48083	ENSMUST00000219212	processed_pseudogene		10	1	27293295	365
ENSMUSG00000094035	protein_coding	Ldlrad2	ENSMUST00000178923	protein_coding	principal2	4	-1	137574569	429
ENSMUSG00000101391	protein_coding	Olfr1217	ENSMUST00000099799	protein_coding	principal1	2	-1	89024099	1105
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000042084	protein_coding		13	1	97137937	3074
ENSMUSG00000027018	protein_coding	Hat1	ENSMUST00000145147	processed_transcript		2	1	71420092	1703
ENSMUSG00000041476	protein_coding	Smpx	ENSMUST00000126418	retained_intron		X	1	157720426	766
ENSMUSG00000002885	protein_coding	Adgre5	ENSMUST00000139797	retained_intron		8	-1	83724809	721
ENSMUSG00000019917	protein_coding	Septin10	ENSMUST00000165971	protein_coding	principal2	10	-1	59221847	2532
ENSMUSG00000047045	protein_coding	Tmem164	ENSMUST00000112896	protein_coding	principal1	X	1	142681726	5224
ENSMUSG00000041476	protein_coding	Smpx	ENSMUST00000190091	protein_coding	principal1	X	1	157698973	1087
ENSMUSG00000002885	protein_coding	Adgre5	ENSMUST00000140606	retained_intron		8	-1	83728304	720
ENSMUSG00000019917	protein_coding	Septin10	ENSMUST00000218171	protein_coding		10	-1	59178857	1051
ENSMUSG00000047045	protein_coding	Tmem164	ENSMUST00000133634	nonsense_mediated_decay		X	1	142681726	2527
ENSMUSG00000089950	processed_pseudogene	Gm16215	ENSMUST00000161990	processed_pseudogene		3	1	144847574	637
ENSMUSG00000019899	protein_coding	Lama2	ENSMUST00000186279	retained_intron		10	-1	26988514	6203
ENSMUSG00000002885	protein_coding	Adgre5	ENSMUST00000154075	retained_intron		8	-1	83728330	588
ENSMUSG00000047045	protein_coding	Tmem164	ENSMUST00000124211	retained_intron		X	1	142682888	441
ENSMUSG00000027018	protein_coding	Hat1	ENSMUST00000028408	protein_coding	principal1	2	1	71389260	1576
ENSMUSG00000033813	protein_coding	Tcea1	ENSMUST00000081551	protein_coding	principal1	1	1	4857814	2547
ENSMUSG00000086846	processed_pseudogene	Gm13642	ENSMUST00000121697	processed_pseudogene		2	-1	71412917	381
ENSMUSG00000002885	protein_coding	Adgre5	ENSMUST00000149368	nonsense_mediated_decay		8	-1	83741183	342
ENSMUSG00000047045	protein_coding	Tmem164	ENSMUST00000151914	protein_coding		X	1	142770993	1369
ENSMUSG00000047045	protein_coding	Tmem164	ENSMUST00000112888	protein_coding		X	1	142825741	4221
ENSMUSG00000081463	processed_pseudogene	Gm15049	ENSMUST00000120474	processed_pseudogene		X	-1	142776347	463
ENSMUSG00000118410	unitary_pseudogene	AC139347.1	ENSMUST00000238641	unitary_pseudogene		16	1	3774780	786
ENSMUSG00000097209	antisense	AU022754	ENSMUST00000229134	antisense		15	1	85580252	653
ENSMUSG00000115961	lincRNA	Gm41409	ENSMUST00000231051	lincRNA		16	1	3770454	1072
ENSMUSG00000033813	protein_coding	Tcea1	ENSMUST00000165720	protein_coding		1	1	4858038	2854
ENSMUSG00000097209	antisense	AU022754	ENSMUST00000180441	antisense		15	1	85581142	2976
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000106941	protein_coding	alternative1	11	1	105181527	3699
ENSMUSG00000036422	protein_coding	Pcdh8	ENSMUST00000039568	protein_coding	principal3	14	-1	79771312	4000
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000092537	protein_coding		11	1	105181793	2743
ENSMUSG00000042558	protein_coding	Adprhl2	ENSMUST00000151191	processed_transcript		4	-1	126321369	1710
ENSMUSG00000070345	protein_coding	Hsf5	ENSMUST00000093956	protein_coding	principal1	11	1	87617164	4158
ENSMUSG00000036422	protein_coding	Pcdh8	ENSMUST00000195355	protein_coding	alternative2	14	-1	79771312	3704
ENSMUSG00000089707	antisense	Slain1os	ENSMUST00000160117	antisense		14	-1	103699442	3101
ENSMUSG00000104217	protein_coding	Gm37988	ENSMUST00000155020	nonsense_mediated_decay	principal1	1	1	4807892	825
ENSMUSG00000036422	protein_coding	Pcdh8	ENSMUST00000195034	retained_intron		14	-1	79771312	4529
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000015107	protein_coding	principal3	11	1	105181917	3212
ENSMUSG00000036422	protein_coding	Pcdh8	ENSMUST00000194214	processed_transcript		14	-1	79771204	576
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000161843	retained_intron		13	1	97137977	3701
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000145048	protein_coding		11	1	105181982	2776
ENSMUSG00000040112	protein_coding	Mrps35	ENSMUST00000149660	retained_intron		6	1	147042764	4607
ENSMUSG00000102774	antisense	Gm9748	ENSMUST00000194881	antisense		14	1	79769908	783
ENSMUSG00000102774	antisense	Gm9748	ENSMUST00000193759	antisense		14	1	79769982	515
ENSMUSG00000083470	processed_pseudogene	Nsa2-ps2	ENSMUST00000120785	processed_pseudogene		X	1	136328299	773
ENSMUSG00000083324	processed_pseudogene	Gm14997	ENSMUST00000119232	processed_pseudogene		X	-1	136330474	636
ENSMUSG00000037033	protein_coding	Clca3b	ENSMUST00000159989	protein_coding	principal1	3	-1	144849357	3361
ENSMUSG00000083162	processed_pseudogene	Gm4917	ENSMUST00000121452	processed_pseudogene		X	1	136338065	650
ENSMUSG00000084216	processed_pseudogene	Gm7973	ENSMUST00000122107	processed_pseudogene		X	1	136340181	488
ENSMUSG00000103015	TEC	Gm37549	ENSMUST00000194096	TEC		17	-1	84017056	4065
ENSMUSG00000019359	protein_coding	Gdpd2	ENSMUST00000019503	protein_coding	principal1	X	1	100729942	2495
ENSMUSG00000084245	processed_pseudogene	Gm14994	ENSMUST00000117482	processed_pseudogene		X	-1	136349269	1092
ENSMUSG00000117431	lincRNA	8430430B14Rik	ENSMUST00000234981	lincRNA		17	1	83998554	434
ENSMUSG00000019359	protein_coding	Gdpd2	ENSMUST00000113744	protein_coding	principal1	X	1	100730186	2427
ENSMUSG00000117431	lincRNA	8430430B14Rik	ENSMUST00000235072	lincRNA		17	1	84008894	440
ENSMUSG00000117446	lincRNA	Gm35551	ENSMUST00000234353	lincRNA		17	-1	84026019	1067
ENSMUSG00000017861	protein_coding	Mybl2	ENSMUST00000018005	protein_coding	principal1	2	1	163054687	3651
ENSMUSG00000019359	protein_coding	Gdpd2	ENSMUST00000151572	retained_intron		X	1	100736340	1421
ENSMUSG00000022382	protein_coding	Wnt7b	ENSMUST00000109424	protein_coding	principal3	15	-1	85581582	3134
ENSMUSG00000017861	protein_coding	Mybl2	ENSMUST00000137620	processed_transcript		2	1	163059349	606
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000161639	protein_coding	principal3	13	1	97137978	3157
ENSMUSG00000097927	lincRNA	Gm6999	ENSMUST00000180427	lincRNA		14	1	79836712	2658
ENSMUSG00000017861	protein_coding	Mybl2	ENSMUST00000138414	retained_intron		2	1	163068212	624
ENSMUSG00000042558	protein_coding	Adprhl2	ENSMUST00000102617	protein_coding	principal1	4	-1	126321703	1672
ENSMUSG00000097927	lincRNA	Gm6999	ENSMUST00000227982	lincRNA		14	1	79890997	564
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000126175	nonsense_mediated_decay		11	1	105181999	3086
ENSMUSG00000017861	protein_coding	Mybl2	ENSMUST00000142729	protein_coding		2	1	163074745	789
ENSMUSG00000040112	protein_coding	Mrps35	ENSMUST00000036111	protein_coding	principal1	6	1	147042764	4162
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000161913	protein_coding		13	1	97137985	1829
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000149459	protein_coding		11	1	105182217	425
ENSMUSG00000074206	protein_coding	Adh6b	ENSMUST00000199673	protein_coding	principal1	3	1	138341775	1700
ENSMUSG00000042558	protein_coding	Adprhl2	ENSMUST00000128188	processed_transcript		4	-1	126321467	1826
ENSMUSG00000017861	protein_coding	Mybl2	ENSMUST00000133322	retained_intron		2	1	163075153	902
ENSMUSG00000042558	protein_coding	Adprhl2	ENSMUST00000133068	processed_transcript		4	-1	126321361	538
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000161518	retained_intron		13	1	97137998	1463
ENSMUSG00000074206	protein_coding	Adh6b	ENSMUST00000199718	retained_intron		3	1	138341972	2550
ENSMUSG00000022382	protein_coding	Wnt7b	ENSMUST00000023015	protein_coding		15	-1	85581821	3365
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000123050	retained_intron		11	1	105207416	603
ENSMUSG00000040112	protein_coding	Mrps35	ENSMUST00000137556	protein_coding		6	1	147044595	331
ENSMUSG00000097927	lincRNA	Gm6999	ENSMUST00000232869	lincRNA		14	1	79891046	666
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000152404	protein_coding		11	1	105208853	703
ENSMUSG00000040112	protein_coding	Mrps35	ENSMUST00000143204	processed_transcript		6	1	147060234	573
ENSMUSG00000097927	lincRNA	Gm6999	ENSMUST00000233773	lincRNA		14	1	79891071	332
ENSMUSG00000074206	protein_coding	Adh6b	ENSMUST00000090166	protein_coding		3	1	138352378	1834
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000134419	retained_intron		11	1	105246758	343
ENSMUSG00000097927	lincRNA	Gm6999	ENSMUST00000232826	lincRNA		14	1	79972970	730
ENSMUSG00000040112	protein_coding	Mrps35	ENSMUST00000123139	processed_transcript		6	1	147061251	467
ENSMUSG00000022382	protein_coding	Wnt7b	ENSMUST00000229495	protein_coding		15	-1	85582473	3125
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000161825	protein_coding		13	1	97138002	4416
ENSMUSG00000098076	processed_pseudogene	Gm6981	ENSMUST00000182467	processed_pseudogene		9	-1	52003281	1008
ENSMUSG00000020694	protein_coding	Tlk2	ENSMUST00000146910	processed_transcript		11	1	105252792	1035
ENSMUSG00000103461	processed_pseudogene	Gm37616	ENSMUST00000193974	processed_pseudogene		3	-1	9047492	322
ENSMUSG00000115190	lincRNA	Gm49542	ENSMUST00000227349	lincRNA		14	1	79898467	3446
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000161929	protein_coding		13	1	97138008	696
ENSMUSG00000103116	lincRNA	4930539M17Rik	ENSMUST00000194792	lincRNA		3	1	9061964	846
ENSMUSG00000044162	protein_coding	Tnip3	ENSMUST00000212402	protein_coding	alternative2	6	1	65525313	1577
ENSMUSG00000022382	protein_coding	Wnt7b	ENSMUST00000167968	protein_coding		15	-1	85580729	3400
ENSMUSG00000044162	protein_coding	Tnip3	ENSMUST00000212375	protein_coding	alternative2	6	1	65525385	1543
ENSMUSG00000022026	protein_coding	Olfm4	ENSMUST00000226541	processed_transcript		14	1	79984081	609
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000022170	protein_coding	alternative2	13	1	97138040	3089
ENSMUSG00000103011	processed_pseudogene	Gm8860	ENSMUST00000193160	processed_pseudogene		3	1	9072767	445
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000160981	nonsense_mediated_decay		13	1	97150350	765
ENSMUSG00000022382	protein_coding	Wnt7b	ENSMUST00000229191	protein_coding	alternative1	15	-1	85578070	2521
ENSMUSG00000099681	antisense	1700052K11Rik	ENSMUST00000190120	antisense		11	-1	105181433	3708
ENSMUSG00000022382	protein_coding	Wnt7b	ENSMUST00000230299	processed_transcript		15	-1	85567022	404
ENSMUSG00000022026	protein_coding	Olfm4	ENSMUST00000228749	protein_coding	principal1	14	1	80000251	2801
ENSMUSG00000071042	protein_coding	Rasgrp3	ENSMUST00000235103	processed_transcript		17	1	75435896	439
ENSMUSG00000072662	protein_coding	Mansc4	ENSMUST00000100780	protein_coding	principal2	6	-1	147087032	1125
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000160989	retained_intron		13	1	97160167	2976
ENSMUSG00000044162	protein_coding	Tnip3	ENSMUST00000114236	protein_coding	principal2	6	1	65590398	3769
ENSMUSG00000055717	protein_coding	Slain1	ENSMUST00000069443	protein_coding	principal1	14	1	103650228	2863
ENSMUSG00000031887	protein_coding	Tradd	ENSMUST00000034359	protein_coding	principal1	8	-1	105264609	1689
ENSMUSG00000021666	protein_coding	Gfm2	ENSMUST00000159321	retained_intron		13	1	97171449	2542
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000002099	protein_coding	principal1	9	1	44772910	4169
ENSMUSG00000044162	protein_coding	Tnip3	ENSMUST00000204438	retained_intron		6	1	65590416	842
ENSMUSG00000072662	protein_coding	Mansc4	ENSMUST00000123367	protein_coding	alternative2	6	-1	147087001	542
ENSMUSG00000031887	protein_coding	Tradd	ENSMUST00000136239	retained_intron		8	-1	105260120	710
ENSMUSG00000044162	protein_coding	Tnip3	ENSMUST00000131482	processed_transcript		6	1	65590428	347
ENSMUSG00000071042	protein_coding	Rasgrp3	ENSMUST00000234640	processed_transcript		17	1	75435926	391
ENSMUSG00000116004	lincRNA	Gm49539	ENSMUST00000230234	lincRNA		15	1	85646083	511
ENSMUSG00000031887	protein_coding	Tradd	ENSMUST00000144762	nonsense_mediated_decay		8	-1	105264581	386
ENSMUSG00000022026	protein_coding	Olfm4	ENSMUST00000088735	protein_coding		14	1	80000302	1640
ENSMUSG00000044162	protein_coding	Tnip3	ENSMUST00000203613	retained_intron		6	1	65590459	426
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000128150	protein_coding		9	1	44772960	531
ENSMUSG00000055717	protein_coding	Slain1	ENSMUST00000160805	protein_coding		14	1	103650646	1998
ENSMUSG00000044162	protein_coding	Tnip3	ENSMUST00000205009	retained_intron		6	1	65590487	4627
ENSMUSG00000044162	protein_coding	Tnip3	ENSMUST00000204241	retained_intron		6	1	65597574	2624
ENSMUSG00000055717	protein_coding	Slain1	ENSMUST00000159456	protein_coding		14	1	103664498	2152
ENSMUSG00000095959	lincRNA	Gm10845	ENSMUST00000228217	lincRNA		14	-1	79869176	3389
ENSMUSG00000095959	lincRNA	Gm10845	ENSMUST00000179430	lincRNA		14	-1	79868398	558
ENSMUSG00000116305	processed_transcript	Lncppara	ENSMUST00000230913	lincRNA		15	1	85653616	1411
ENSMUSG00000115291	processed_pseudogene	Gm18605	ENSMUST00000227077	processed_pseudogene		14	1	79947657	623
ENSMUSG00000055717	protein_coding	Slain1	ENSMUST00000162818	protein_coding		14	1	103655771	642
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000143654	processed_transcript		9	1	44773051	590
ENSMUSG00000031887	protein_coding	Tradd	ENSMUST00000147670	retained_intron		8	-1	105264603	610
ENSMUSG00000116305	processed_transcript	Lncppara	ENSMUST00000230286	retained_intron		15	1	85703773	625
ENSMUSG00000106718	lincRNA	Gm20052	ENSMUST00000200831	lincRNA		5	1	37893772	1525
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000124534	processed_transcript		9	1	44773054	564
ENSMUSG00000106718	lincRNA	Gm20052	ENSMUST00000201043	lincRNA		5	1	37893939	181
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000214854	protein_coding		9	1	44773062	778
ENSMUSG00000086188	antisense	Gm15169	ENSMUST00000130794	antisense		X	-1	157798019	2335
ENSMUSG00000082261	processed_pseudogene	Gm14999	ENSMUST00000121039	processed_pseudogene		X	-1	136357278	624
ENSMUSG00000106718	lincRNA	Gm20052	ENSMUST00000202451	lincRNA		5	1	37894350	383
ENSMUSG00000086188	antisense	Gm15169	ENSMUST00000126095	antisense		X	-1	157798012	2753
ENSMUSG00000081507	processed_pseudogene	Gm14993	ENSMUST00000121180	processed_pseudogene		X	-1	136367412	164
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000125877	protein_coding		9	1	44773100	674
ENSMUSG00000025534	protein_coding	Gusb	ENSMUST00000026613	protein_coding	principal1	5	-1	130003049	2687
ENSMUSG00000083517	processed_pseudogene	Gm14998	ENSMUST00000120502	processed_pseudogene		X	1	136366756	495
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000238800	protein_coding		9	1	44773153	1059
ENSMUSG00000047485	protein_coding	Klhl34	ENSMUST00000087157	protein_coding	principal1	X	1	157818435	1935
ENSMUSG00000106718	lincRNA	Gm20052	ENSMUST00000202443	lincRNA		5	1	37894696	648
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000147559	protein_coding		9	1	44773263	229
ENSMUSG00000106718	lincRNA	Gm20052	ENSMUST00000201327	lincRNA		5	1	37894707	668
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000151905	protein_coding		9	1	44773700	310
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000118186	protein_coding	principal1	9	1	44776377	1317
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000210383	antisense		7	-1	45575157	897
ENSMUSG00000107126	lincRNA	Gm40289	ENSMUST00000201470	lincRNA		5	1	37983693	2268
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000133167	retained_intron		9	1	44777942	805
ENSMUSG00000107129	TEC	Gm43762	ENSMUST00000201521	TEC		5	-1	38028009	295
ENSMUSG00000025534	protein_coding	Gusb	ENSMUST00000201801	nonsense_mediated_decay		5	-1	130002828	2272
ENSMUSG00000030047	protein_coding	Arhgap25	ENSMUST00000113637	protein_coding	principal4	6	-1	87533235	3671
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000210569	antisense		7	-1	45575157	963
ENSMUSG00000026621	protein_coding	Mtarc1	ENSMUST00000048462	protein_coding	principal2	1	-1	184811197	2039
ENSMUSG00000025534	protein_coding	Gusb	ENSMUST00000126676	retained_intron		5	-1	129990642	733
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000142586	processed_transcript		9	1	44784303	754
ENSMUSG00000069114	protein_coding	Zbtb10	ENSMUST00000155203	protein_coding	principal1	3	1	9250602	7414
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000209416	antisense		7	-1	45575147	856
ENSMUSG00000098188	protein_coding	Sowahc	ENSMUST00000182161	protein_coding	principal1	10	1	59221953	4482
ENSMUSG00000022325	protein_coding	Pop1	ENSMUST00000052290	protein_coding	principal4	15	1	34495304	3395
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000149020	retained_intron		9	1	44789444	940
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000126166	protein_coding		14	-1	54653616	2369
ENSMUSG00000002031	protein_coding	Ift46	ENSMUST00000239014	protein_coding	principal1	9	1	44773009	3337
ENSMUSG00000026621	protein_coding	Mtarc1	ENSMUST00000189492	protein_coding		1	-1	184808853	1239
ENSMUSG00000025534	protein_coding	Gusb	ENSMUST00000111308	protein_coding		5	-1	130002865	2038
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000211209	antisense		7	-1	45575327	974
ENSMUSG00000045794	protein_coding	Lkaaear1	ENSMUST00000052416	protein_coding	principal1	2	-1	181698442	718
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000115438	protein_coding	alternative1	X	-1	13846578	8366
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000209910	antisense		7	-1	45575156	553
ENSMUSG00000026621	protein_coding	Mtarc1	ENSMUST00000110992	protein_coding	alternative2	1	-1	184811313	2152
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000209510	antisense		7	-1	45575157	671
ENSMUSG00000022325	protein_coding	Pop1	ENSMUST00000079028	protein_coding	alternative2	15	1	34495323	3275
ENSMUSG00000025534	protein_coding	Gusb	ENSMUST00000111307	protein_coding		5	-1	130002881	932
ENSMUSG00000045794	protein_coding	Lkaaear1	ENSMUST00000132409	protein_coding		2	-1	181697416	420
ENSMUSG00000084340	processed_pseudogene	Gm14766	ENSMUST00000121689	processed_pseudogene		X	1	85790873	367
ENSMUSG00000042109	protein_coding	Csdc2	ENSMUST00000038757	protein_coding	principal1	15	1	81936759	2490
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000210866	antisense		7	-1	45575173	2434
ENSMUSG00000040102	protein_coding	Klhl42	ENSMUST00000036003	protein_coding	principal1	6	1	147091379	6267
ENSMUSG00000081212	processed_pseudogene	Gm6964	ENSMUST00000117206	processed_pseudogene		X	-1	85794120	437
ENSMUSG00000025534	protein_coding	Gusb	ENSMUST00000122994	retained_intron		5	-1	130002965	1466
ENSMUSG00000022325	protein_coding	Pop1	ENSMUST00000126223	retained_intron		15	1	34509907	392
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000141453	protein_coding		14	-1	54653667	2381
ENSMUSG00000102310	TEC	Gm37631	ENSMUST00000192275	TEC		10	-1	98486873	364
ENSMUSG00000081452	processed_pseudogene	Gm14761	ENSMUST00000121363	processed_pseudogene		X	1	85823168	262
ENSMUSG00000013089	protein_coding	Etv5	ENSMUST00000079601	protein_coding	principal1	16	-1	22439719	3975
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000211521	antisense		7	-1	45571038	461
ENSMUSG00000040102	protein_coding	Klhl42	ENSMUST00000203866	processed_transcript		6	1	147105314	660
ENSMUSG00000042109	protein_coding	Csdc2	ENSMUST00000230633	protein_coding		15	1	81936792	409
ENSMUSG00000022325	protein_coding	Pop1	ENSMUST00000155073	processed_transcript		15	1	34514170	470
ENSMUSG00000040102	protein_coding	Klhl42	ENSMUST00000203441	nonsense_mediated_decay		6	1	147108093	881
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000210623	antisense		7	-1	45575194	663
ENSMUSG00000030047	protein_coding	Arhgap25	ENSMUST00000101197	protein_coding	alternative2	6	-1	87496314	2493
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000211530	antisense		7	-1	45575138	402
ENSMUSG00000112874	lincRNA	Gm34297	ENSMUST00000219170	lincRNA		10	1	98537478	2453
ENSMUSG00000042109	protein_coding	Csdc2	ENSMUST00000135663	protein_coding		15	1	81936982	571
ENSMUSG00000013089	protein_coding	Etv5	ENSMUST00000168774	protein_coding		16	-1	22436514	3773
ENSMUSG00000022325	protein_coding	Pop1	ENSMUST00000132427	retained_intron		15	1	34515790	794
ENSMUSG00000112874	lincRNA	Gm34297	ENSMUST00000218569	lincRNA		10	1	98537480	1980
ENSMUSG00000109644	antisense	0610005C13Rik	ENSMUST00000210965	antisense		7	-1	45575156	650
ENSMUSG00000112874	lincRNA	Gm34297	ENSMUST00000219569	lincRNA		10	1	98537480	477
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000033321	protein_coding		X	-1	13846556	4057
ENSMUSG00000013089	protein_coding	Etv5	ENSMUST00000170803	nonsense_mediated_decay		16	-1	22401829	433
ENSMUSG00000112874	lincRNA	Gm34297	ENSMUST00000220028	lincRNA		10	1	98537482	1766
ENSMUSG00000042109	protein_coding	Csdc2	ENSMUST00000140209	protein_coding		15	1	81945731	451
ENSMUSG00000022325	protein_coding	Pop1	ENSMUST00000153061	retained_intron		15	1	34526145	522
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000156096	protein_coding		X	-1	13786030	7707
ENSMUSG00000115005	processed_pseudogene	Gm49195	ENSMUST00000226504	processed_pseudogene		15	1	34531560	139
ENSMUSG00000031105	protein_coding	Slc25a14	ENSMUST00000033431	protein_coding	principal3	X	1	48623578	1760
ENSMUSG00000042109	protein_coding	Csdc2	ENSMUST00000152678	retained_intron		15	1	81946961	3565
ENSMUSG00000013089	protein_coding	Etv5	ENSMUST00000165506	processed_transcript		16	-1	22439616	342
ENSMUSG00000049001	protein_coding	Ndnf	ENSMUST00000054351	protein_coding	principal1	6	1	65671590	10101
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000128095	protein_coding		X	-1	13537669	666
ENSMUSG00000030047	protein_coding	Arhgap25	ENSMUST00000071024	protein_coding		6	-1	87533259	2635
ENSMUSG00000013089	protein_coding	Etv5	ENSMUST00000170393	protein_coding		16	-1	22439570	489
ENSMUSG00000031105	protein_coding	Slc25a14	ENSMUST00000134257	protein_coding		X	1	48623578	1805
ENSMUSG00000104445	protein_coding	Rhbg	ENSMUST00000171887	protein_coding	principal1	3	-1	88254709	1937
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000115435	protein_coding		X	-1	13526768	726
ENSMUSG00000030047	protein_coding	Arhgap25	ENSMUST00000203559	retained_intron		6	-1	87463647	736
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000124710	protein_coding		X	-1	13846088	487
ENSMUSG00000049001	protein_coding	Ndnf	ENSMUST00000169795	retained_intron		6	1	65701430	527
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000199470	protein_coding	alternative2	3	-1	152265767	2392
ENSMUSG00000103574	processed_pseudogene	Gm37116	ENSMUST00000195161	processed_pseudogene		3	-1	88284753	147
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000155989	processed_transcript		X	-1	13846735	212
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000139735	protein_coding		X	-1	13559331	845
ENSMUSG00000075105	protein_coding	Olfr1218	ENSMUST00000213609	protein_coding	principal1	2	-1	89057364	3760
ENSMUSG00000103485	TEC	Gm38001	ENSMUST00000192900	TEC		3	1	9496168	3761
ENSMUSG00000075105	protein_coding	Olfr1218	ENSMUST00000215048	protein_coding	principal1	2	-1	89061169	3900
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000132240	processed_transcript		X	-1	13851367	354
ENSMUSG00000075105	protein_coding	Olfr1218	ENSMUST00000215054	protein_coding	principal1	2	-1	89061187	3875
ENSMUSG00000036273	protein_coding	Lrrk2	ENSMUST00000060642	protein_coding	principal1	15	1	91673175	8275
ENSMUSG00000075105	protein_coding	Olfr1218	ENSMUST00000099798	protein_coding	principal1	2	-1	89055424	936
ENSMUSG00000042225	protein_coding	Ammecr1	ENSMUST00000041317	protein_coding	principal1	X	-1	142966728	5437
ENSMUSG00000114872	processed_pseudogene	Gm18759	ENSMUST00000225121	processed_pseudogene		13	-1	115164820	1213
ENSMUSG00000114471	processed_pseudogene	Gm47891	ENSMUST00000224035	processed_pseudogene		13	1	115282201	395
ENSMUSG00000114551	processed_pseudogene	Gm6035	ENSMUST00000225901	processed_pseudogene		13	-1	115529772	1217
ENSMUSG00000010538	protein_coding	Tsacc	ENSMUST00000107556	protein_coding	principal1	3	-1	88296999	584
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000152358	retained_intron		X	-1	13846578	2525
ENSMUSG00000114847	processed_pseudogene	Gm47892	ENSMUST00000225821	processed_pseudogene		13	-1	115719499	196
ENSMUSG00000064247	protein_coding	Plcxd1	ENSMUST00000086687	protein_coding	principal1	5	1	110099969	1346
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000128012	protein_coding		X	-1	13677594	745
ENSMUSG00000114324	processed_pseudogene	Gm18135	ENSMUST00000224201	processed_pseudogene		13	1	115770936	533
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176253	processed_transcript		7	1	30314807	583
ENSMUSG00000031105	protein_coding	Slc25a14	ENSMUST00000134757	nonsense_mediated_decay		X	1	48623578	1862
ENSMUSG00000031012	protein_coding	Cask	ENSMUST00000115436	protein_coding	principal3	X	-1	13846541	8260
ENSMUSG00000010538	protein_coding	Tsacc	ENSMUST00000010682	protein_coding	principal1	3	-1	88296838	481
ENSMUSG00000031105	protein_coding	Slc25a14	ENSMUST00000153047	processed_transcript		X	1	48623749	724
ENSMUSG00000111296	antisense	2010001M07Rik	ENSMUST00000214235	antisense		9	1	60334142	364
ENSMUSG00000085584	protein_coding	Rtl9	ENSMUST00000165829	protein_coding	principal1	X	1	143099594	4104
ENSMUSG00000075104	protein_coding	Olfr1219	ENSMUST00000213724	protein_coding	principal1	2	-1	89079637	5669
ENSMUSG00000005716	protein_coding	Pvalb	ENSMUST00000005860	protein_coding	principal1	15	-1	78204237	977
ENSMUSG00000031105	protein_coding	Slc25a14	ENSMUST00000114936	protein_coding	alternative1	X	1	48623765	1582
ENSMUSG00000075104	protein_coding	Olfr1219	ENSMUST00000217421	protein_coding	principal1	2	-1	89083487	5849
ENSMUSG00000010538	protein_coding	Tsacc	ENSMUST00000123536	retained_intron		3	-1	88296896	600
ENSMUSG00000031105	protein_coding	Slc25a14	ENSMUST00000150221	retained_intron		X	1	48623820	752
ENSMUSG00000036273	protein_coding	Lrrk2	ENSMUST00000140734	processed_transcript		15	1	91738948	3452
ENSMUSG00000075104	protein_coding	Olfr1219	ENSMUST00000214442	protein_coding	principal1	2	-1	89083487	3694
ENSMUSG00000036206	protein_coding	Sh3bp4	ENSMUST00000066279	protein_coding	principal1	1	1	89070415	4995
ENSMUSG00000036053	protein_coding	Fmnl2	ENSMUST00000155586	protein_coding		2	1	52857860	3939
ENSMUSG00000036273	protein_coding	Lrrk2	ENSMUST00000156900	processed_transcript		15	1	91772345	438
ENSMUSG00000075104	protein_coding	Olfr1219	ENSMUST00000215225	protein_coding	principal1	2	-1	89083513	5865
ENSMUSG00000031105	protein_coding	Slc25a14	ENSMUST00000177710	protein_coding	alternative1	X	1	48623962	1516
ENSMUSG00000075104	protein_coding	Olfr1219	ENSMUST00000099797	protein_coding	principal1	2	-1	89075089	936
ENSMUSG00000036206	protein_coding	Sh3bp4	ENSMUST00000123745	processed_transcript		1	1	89070453	341
ENSMUSG00000102700	TEC	Gm38312	ENSMUST00000195426	TEC		1	1	89097073	1746
ENSMUSG00000103766	protein_coding	Gm38392	ENSMUST00000165196	protein_coding	principal5	3	-1	88287210	1303
ENSMUSG00000036053	protein_coding	Fmnl2	ENSMUST00000090952	protein_coding	alternative2	2	1	52857860	5414
ENSMUSG00000114956	processed_pseudogene	Gm47893	ENSMUST00000224590	processed_pseudogene		13	1	116096035	266
ENSMUSG00000094745	protein_coding	Olfr954	ENSMUST00000214818	protein_coding	alternative2	9	1	39456701	3299
ENSMUSG00000084168	processed_pseudogene	Atp5l2-ps	ENSMUST00000120130	processed_pseudogene		11	1	97768060	312
ENSMUSG00000061669	processed_pseudogene	Rpl34-ps2	ENSMUST00000081679	processed_pseudogene		13	1	116153781	354
ENSMUSG00000094745	protein_coding	Olfr954	ENSMUST00000080329	protein_coding	principal2	9	1	39461433	945
ENSMUSG00000064247	protein_coding	Plcxd1	ENSMUST00000141066	protein_coding		5	1	110100422	386
ENSMUSG00000102083	processed_pseudogene	Gm5259	ENSMUST00000191231	processed_pseudogene		1	-1	89256981	800
ENSMUSG00000103766	protein_coding	Gm38392	ENSMUST00000163277	nonsense_mediated_decay	alternative2	3	-1	88287210	1197
ENSMUSG00000005716	protein_coding	Pvalb	ENSMUST00000120592	protein_coding	principal1	15	-1	78206400	953
ENSMUSG00000041817	protein_coding	Fam169a	ENSMUST00000169863	protein_coding	principal1	13	1	97067286	6013
ENSMUSG00000036053	protein_coding	Fmnl2	ENSMUST00000127122	protein_coding	alternative2	2	1	52857860	5508
ENSMUSG00000101480	protein_coding	Olfr1220	ENSMUST00000213288	protein_coding	principal1	2	-1	89106835	4223
ENSMUSG00000101288	lincRNA	Gm28342	ENSMUST00000190308	lincRNA		1	-1	89358144	589
ENSMUSG00000054940	protein_coding	Olfr137	ENSMUST00000213505	protein_coding	principal1	17	-1	38307570	2514
ENSMUSG00000101480	protein_coding	Olfr1220	ENSMUST00000099806	protein_coding	principal1	2	-1	89106814	1201
ENSMUSG00000064247	protein_coding	Plcxd1	ENSMUST00000112534	nonsense_mediated_decay		5	1	110100559	3314
ENSMUSG00000054940	protein_coding	Olfr137	ENSMUST00000057394	protein_coding	principal1	17	-1	38305460	942
ENSMUSG00000099938	lincRNA	C030007H22Rik	ENSMUST00000186258	lincRNA		1	-1	89406133	591
ENSMUSG00000041817	protein_coding	Fam169a	ENSMUST00000042517	protein_coding	principal1	13	1	97071643	4547
ENSMUSG00000101480	protein_coding	Olfr1220	ENSMUST00000099789	protein_coding	principal1	2	-1	89097963	1026
ENSMUSG00000040229	protein_coding	Gpr34	ENSMUST00000041708	protein_coding	principal1	X	1	13632089	2088
ENSMUSG00000036273	protein_coding	Lrrk2	ENSMUST00000133743	processed_transcript		15	1	91780378	2203
ENSMUSG00000064247	protein_coding	Plcxd1	ENSMUST00000125748	processed_transcript		5	1	110101204	3177
ENSMUSG00000036053	protein_coding	Fmnl2	ENSMUST00000049483	protein_coding	principal2	2	1	52857860	5461
ENSMUSG00000036273	protein_coding	Lrrk2	ENSMUST00000137657	retained_intron		15	1	91808238	3801
ENSMUSG00000032307	protein_coding	Ube2q2	ENSMUST00000059555	protein_coding	principal3	9	1	55148854	3456
ENSMUSG00000036273	protein_coding	Lrrk2	ENSMUST00000172797	retained_intron		15	1	91814628	812
ENSMUSG00000039865	protein_coding	Slc44a3	ENSMUST00000198335	processed_transcript		3	-1	121460911	615
ENSMUSG00000032307	protein_coding	Ube2q2	ENSMUST00000121677	protein_coding	alternative1	9	1	55149395	1680
ENSMUSG00000040229	protein_coding	Gpr34	ENSMUST00000096492	protein_coding	principal1	X	1	13632769	1898
ENSMUSG00000036053	protein_coding	Fmnl2	ENSMUST00000050719	protein_coding		2	1	52857868	3380
ENSMUSG00000018543	protein_coding	1700001P01Rik	ENSMUST00000107576	protein_coding	principal1	11	-1	97775918	624
ENSMUSG00000032307	protein_coding	Ube2q2	ENSMUST00000122441	protein_coding		9	1	55150083	2081
ENSMUSG00000040209	protein_coding	Zfp704	ENSMUST00000041124	protein_coding	principal1	3	-1	9610085	13834
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000111945	protein_coding		14	-1	33447158	5756
ENSMUSG00000022122	protein_coding	Ednrb	ENSMUST00000022718	protein_coding	principal1	14	-1	103844402	4107
ENSMUSG00000032307	protein_coding	Ube2q2	ENSMUST00000148468	retained_intron		9	1	55194845	993
ENSMUSG00000105229	sense_intronic	Gm43149	ENSMUST00000198162	sense_intronic		3	-1	103767116	1422
ENSMUSG00000022122	protein_coding	Ednrb	ENSMUST00000227824	protein_coding	principal1	14	-1	103843695	2669
ENSMUSG00000040209	protein_coding	Zfp704	ENSMUST00000193947	protein_coding		3	-1	9565299	2013
ENSMUSG00000117432	lincRNA	Gm49967	ENSMUST00000234723	lincRNA		17	1	84036890	387
ENSMUSG00000104874	sense_intronic	Gm43387	ENSMUST00000196896	sense_intronic		3	-1	103782979	1066
ENSMUSG00000040209	protein_coding	Zfp704	ENSMUST00000192832	retained_intron		3	-1	9441036	1455
ENSMUSG00000019899	protein_coding	Lama2	ENSMUST00000092639	protein_coding	principal1	10	-1	27616843	9614
ENSMUSG00000022122	protein_coding	Ednrb	ENSMUST00000172237	protein_coding	principal1	14	-1	103843696	3989
ENSMUSG00000019899	protein_coding	Lama2	ENSMUST00000219763	protein_coding		10	-1	27056645	3383
ENSMUSG00000117571	lincRNA	4933433H22Rik	ENSMUST00000234076	lincRNA		17	1	84078660	1789
ENSMUSG00000083089	processed_pseudogene	Gm4760	ENSMUST00000119663	processed_pseudogene		X	-1	143184537	1030
ENSMUSG00000104311	TEC	Gm37910	ENSMUST00000194770	TEC		14	1	103948096	217
ENSMUSG00000019899	protein_coding	Lama2	ENSMUST00000189575	protein_coding		10	-1	27616796	4244
ENSMUSG00000019899	protein_coding	Lama2	ENSMUST00000239098	protein_coding		10	-1	27212254	767
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000022504	protein_coding	principal5	14	-1	33447145	2587
ENSMUSG00000097365	lincRNA	C030034L19Rik	ENSMUST00000180874	lincRNA		3	1	9403064	2032
ENSMUSG00000115727	lincRNA	4930432J09Rik	ENSMUST00000228770	lincRNA		14	-1	104027142	3132
ENSMUSG00000115727	lincRNA	4930432J09Rik	ENSMUST00000227414	lincRNA		14	-1	103998284	1077
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000022794	protein_coding	alternative2	14	-1	54653695	2365
ENSMUSG00000097365	lincRNA	C030034L19Rik	ENSMUST00000181331	lincRNA		3	1	9403068	2809
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000111944	protein_coding	alternative1	14	-1	33447142	1528
ENSMUSG00000097365	lincRNA	C030034L19Rik	ENSMUST00000181930	lincRNA		3	1	9403080	3133
ENSMUSG00000080760	processed_pseudogene	Gm7571	ENSMUST00000120252	processed_pseudogene		6	1	147173481	927
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000149823	retained_intron		9	1	75071015	1768
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000111943	protein_coding	alternative1	14	-1	33410994	1310
ENSMUSG00000117485	lincRNA	Gm19696	ENSMUST00000234741	lincRNA		17	-1	84139841	1136
ENSMUSG00000118482	processed_pseudogene	Gm50472	ENSMUST00000238775	processed_pseudogene		1	1	75229552	228
ENSMUSG00000043614	protein_coding	Vps37d	ENSMUST00000067935	protein_coding	principal1	5	-1	135078266	1544
ENSMUSG00000117485	lincRNA	Gm19696	ENSMUST00000234322	lincRNA		17	-1	84135960	360
ENSMUSG00000116325	transcribed_unprocessed_pseudogene	Gm46501	ENSMUST00000230551	transcribed_unprocessed_pseudogene		15	1	82433527	683
ENSMUSG00000043614	protein_coding	Vps37d	ENSMUST00000076203	protein_coding		5	-1	135078266	1286
ENSMUSG00000030826	protein_coding	Bcat2	ENSMUST00000033098	protein_coding	principal1	7	1	45570153	1772
ENSMUSG00000096094	protein_coding	A630095N17Rik	ENSMUST00000179573	protein_coding	alternative2	1	-1	75223654	648
ENSMUSG00000070645	protein_coding	Ren1	ENSMUST00000094556	protein_coding	principal1	1	1	133350510	1592
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000150659	processed_transcript		14	-1	33390308	533
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000111942	protein_coding		14	-1	33410977	927
ENSMUSG00000117485	lincRNA	Gm19696	ENSMUST00000234314	lincRNA		17	-1	84137228	896
ENSMUSG00000070645	protein_coding	Ren1	ENSMUST00000112287	protein_coding		1	1	133351909	215
ENSMUSG00000117485	lincRNA	Gm19696	ENSMUST00000234195	lincRNA		17	-1	84137497	561
ENSMUSG00000001504	protein_coding	Irx2	ENSMUST00000074372	protein_coding	principal1	13	1	72628820	2625
ENSMUSG00000117485	lincRNA	Gm19696	ENSMUST00000234659	lincRNA		17	-1	84156426	388
ENSMUSG00000096094	protein_coding	A630095N17Rik	ENSMUST00000180101	protein_coding	principal4	1	-1	75232090	571
ENSMUSG00000106956	unprocessed_pseudogene	Gm19617	ENSMUST00000202977	unprocessed_pseudogene		5	1	148456838	308
ENSMUSG00000117485	lincRNA	Gm19696	ENSMUST00000234492	lincRNA		17	-1	84137514	578
ENSMUSG00000001504	protein_coding	Irx2	ENSMUST00000169028	processed_transcript		13	1	72628971	515
ENSMUSG00000096094	protein_coding	A630095N17Rik	ENSMUST00000191271	nonsense_mediated_decay		1	-1	75232102	475
ENSMUSG00000001504	protein_coding	Irx2	ENSMUST00000167067	protein_coding		13	1	72629825	449
ENSMUSG00000039865	protein_coding	Slc44a3	ENSMUST00000039197	protein_coding	principal1	3	-1	121532404	2620
ENSMUSG00000001504	protein_coding	Irx2	ENSMUST00000163393	retained_intron		13	1	72632085	927
ENSMUSG00000001504	protein_coding	Irx2	ENSMUST00000172353	protein_coding		13	1	72632597	559
ENSMUSG00000117485	lincRNA	Gm19696	ENSMUST00000234394	lincRNA		17	-1	84156440	513
ENSMUSG00000039865	protein_coding	Slc44a3	ENSMUST00000199422	processed_transcript		3	-1	121527107	2646
ENSMUSG00000019899	protein_coding	Lama2	ENSMUST00000185839	retained_intron		10	-1	27616942	2740
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000077220	protein_coding	principal1	5	-1	110108197	1617
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000127143	retained_intron		14	-1	33389228	647
ENSMUSG00000030826	protein_coding	Bcat2	ENSMUST00000209569	retained_intron		7	1	45570350	1905
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000227306	retained_intron		14	-1	33391704	3529
ENSMUSG00000085600	lincRNA	E330012B07Rik	ENSMUST00000151979	lincRNA		6	1	147180244	2349
ENSMUSG00000019899	protein_coding	Lama2	ENSMUST00000186965	retained_intron		10	-1	27616866	1687
ENSMUSG00000085600	lincRNA	E330012B07Rik	ENSMUST00000133471	lincRNA		6	1	147180262	656
ENSMUSG00000074196	transcribed_unprocessed_pseudogene	Clca4c-ps	ENSMUST00000200595	transcribed_unprocessed_pseudogene		3	-1	144889745	2779
ENSMUSG00000019899	protein_coding	Lama2	ENSMUST00000188963	retained_intron		10	-1	27619758	643
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000130539	retained_intron		14	-1	33447158	2811
ENSMUSG00000021665	protein_coding	Hexb	ENSMUST00000022169	protein_coding	principal1	13	-1	97198357	1905
ENSMUSG00000019899	protein_coding	Lama2	ENSMUST00000187535	processed_transcript		10	-1	27616866	328
ENSMUSG00000068086	protein_coding	Cyp2d9	ENSMUST00000229793	protein_coding		15	1	82433437	550
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000226798	nonsense_mediated_decay		14	-1	33447152	597
ENSMUSG00000074196	transcribed_unprocessed_pseudogene	Clca4c-ps	ENSMUST00000098551	retained_intron		3	-1	144896011	712
ENSMUSG00000030826	protein_coding	Bcat2	ENSMUST00000120864	protein_coding		7	1	45570373	1536
ENSMUSG00000087013	processed_transcript	2610027K06Rik	ENSMUST00000136117	processed_transcript		11	-1	85832223	879
ENSMUSG00000097124	antisense	A530020G20Rik	ENSMUST00000181070	antisense		3	1	121531619	3660
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000054594	protein_coding	principal3	7	1	30314816	1355
ENSMUSG00000021936	protein_coding	Mapk8	ENSMUST00000132379	retained_intron		14	-1	33447157	1619
ENSMUSG00000097124	antisense	A530020G20Rik	ENSMUST00000199889	antisense		3	1	121531629	758
ENSMUSG00000087013	processed_transcript	2610027K06Rik	ENSMUST00000140673	processed_transcript		11	-1	85832209	2076
ENSMUSG00000071042	protein_coding	Rasgrp3	ENSMUST00000164192	protein_coding	principal1	17	1	75435926	4655
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000138507	retained_intron		5	-1	110105335	928
ENSMUSG00000087013	processed_transcript	2610027K06Rik	ENSMUST00000128213	processed_transcript		11	-1	85804155	684
ENSMUSG00000021665	protein_coding	Hexb	ENSMUST00000222700	processed_transcript		13	-1	97198295	727
ENSMUSG00000097124	antisense	A530020G20Rik	ENSMUST00000180804	antisense		3	1	121531679	446
ENSMUSG00000082240	processed_pseudogene	Gm14380	ENSMUST00000122298	processed_pseudogene		X	-1	7143288	431
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176965	retained_intron		7	1	30314871	664
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000177078	protein_coding		7	1	30314880	790
ENSMUSG00000030826	protein_coding	Bcat2	ENSMUST00000209204	protein_coding		7	1	45570996	2081
ENSMUSG00000071042	protein_coding	Rasgrp3	ENSMUST00000095204	protein_coding	principal1	17	1	75465486	4720
ENSMUSG00000030826	protein_coding	Bcat2	ENSMUST00000211173	protein_coding		7	1	45572869	1684
ENSMUSG00000057762	protein_coding	Gm6169	ENSMUST00000071118	protein_coding	principal1	13	-1	97099237	1030
ENSMUSG00000030762	protein_coding	Aqp8	ENSMUST00000033023	protein_coding	alternative2	7	1	123462291	1487
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176071	retained_intron		7	1	30314885	773
ENSMUSG00000030826	protein_coding	Bcat2	ENSMUST00000210811	protein_coding		7	1	45575100	486
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176504	protein_coding		7	1	30314888	836
ENSMUSG00000071042	protein_coding	Rasgrp3	ENSMUST00000234660	protein_coding		17	1	75465572	390
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000079012	protein_coding	principal3	6	1	116338024	4450
ENSMUSG00000071042	protein_coding	Rasgrp3	ENSMUST00000234644	processed_transcript		17	1	75465619	565
ENSMUSG00000030826	protein_coding	Bcat2	ENSMUST00000209543	retained_intron		7	1	45575222	632
ENSMUSG00000067049	protein_coding	Unc93a	ENSMUST00000232960	protein_coding	principal1	17	-1	13131755	2791
ENSMUSG00000030826	protein_coding	Bcat2	ENSMUST00000209410	nonsense_mediated_decay		7	1	45585421	917
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176304	protein_coding	alternative2	7	1	30314916	1006
ENSMUSG00000071042	protein_coding	Rasgrp3	ENSMUST00000234011	protein_coding		17	1	75491104	518
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000175672	retained_intron		7	1	30315150	368
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000101032	protein_coding	principal3	6	1	116338033	4611
ENSMUSG00000030762	protein_coding	Aqp8	ENSMUST00000098056	protein_coding	principal3	7	1	123462312	1451
ENSMUSG00000067049	protein_coding	Unc93a	ENSMUST00000084966	protein_coding	principal1	17	-1	13131791	2643
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000127628	retained_intron		5	-1	110107202	1481
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176006	retained_intron		7	1	30315310	938
ENSMUSG00000086736	lincRNA	Gm14902	ENSMUST00000145576	lincRNA		X	1	100741093	1007
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000112210	protein_coding	principal1	14	-1	30626210	2777
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176984	retained_intron		7	1	30316020	649
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000199496	processed_transcript		5	-1	110107176	583
ENSMUSG00000114305	TEC	Gm48437	ENSMUST00000225136	TEC		14	-1	10780448	1382
ENSMUSG00000067049	protein_coding	Unc93a	ENSMUST00000233405	protein_coding	principal1	17	-1	13131810	2801
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000135409	protein_coding		5	-1	110107416	756
ENSMUSG00000089833	antisense	Fhitos	ENSMUST00000226067	antisense		14	1	10738535	1288
ENSMUSG00000008153	protein_coding	Clstn3	ENSMUST00000239139	nonsense_mediated_decay		6	-1	124433500	1687
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000131918	retained_intron		5	-1	110106924	818
ENSMUSG00000089833	antisense	Fhitos	ENSMUST00000160149	antisense		14	1	10738553	1511
ENSMUSG00000031936	protein_coding	Hephl1	ENSMUST00000159985	protein_coding	principal1	9	-1	15112108	5261
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000123405	protein_coding	alternative2	6	1	116338034	2102
ENSMUSG00000089795	processed_pseudogene	Hmgb3-ps	ENSMUST00000162465	processed_pseudogene		14	1	9863102	601
ENSMUSG00000090306	transcribed_unprocessed_pseudogene	Adh6-ps1	ENSMUST00000171054	processed_transcript		3	1	138374121	2789
ENSMUSG00000112647	lincRNA	Gm5427	ENSMUST00000217680	lincRNA		10	-1	98699710	2591
ENSMUSG00000114749	TEC	Gm48442	ENSMUST00000223594	TEC		14	-1	10379948	2252
ENSMUSG00000104243	processed_pseudogene	Gm38153	ENSMUST00000195484	processed_pseudogene		3	-1	30562129	472
ENSMUSG00000090306	transcribed_unprocessed_pseudogene	Adh6-ps1	ENSMUST00000196293	transcribed_unprocessed_pseudogene		3	1	138374190	754
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000175902	retained_intron		7	1	30316772	672
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000204657	protein_coding		6	1	116338044	780
ENSMUSG00000114391	antisense	Gm48439	ENSMUST00000225711	antisense		14	1	10178620	330
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176232	processed_transcript		7	1	30316942	376
ENSMUSG00000102256	lincRNA	Gm38258	ENSMUST00000191792	lincRNA		3	-1	30564243	675
ENSMUSG00000030762	protein_coding	Aqp8	ENSMUST00000206106	processed_transcript		7	1	123463751	1159
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000177257	processed_transcript		7	1	30316987	355
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000203116	protein_coding		6	1	116338053	648
ENSMUSG00000089686	transcribed_processed_pseudogene	Mnd1-ps	ENSMUST00000224435	processed_transcript		14	1	9884195	2574
ENSMUSG00000112099	processed_pseudogene	Gm8960	ENSMUST00000219787	processed_pseudogene		10	-1	115600328	788
ENSMUSG00000102505	TEC	1600017P15Rik	ENSMUST00000193960	TEC		3	-1	30595733	890
ENSMUSG00000089686	transcribed_processed_pseudogene	Mnd1-ps	ENSMUST00000162462	transcribed_processed_pseudogene		14	1	9886026	604
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000022521	protein_coding		14	-1	30610302	2612
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000140538	protein_coding		5	-1	110107711	516
ENSMUSG00000089785	transcribed_processed_pseudogene	Slc25a5-ps	ENSMUST00000223716	processed_transcript		14	1	11161529	1786
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176571	protein_coding		7	1	30316988	278
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000203193	protein_coding	alternative2	6	1	116338056	4245
ENSMUSG00000089785	transcribed_processed_pseudogene	Slc25a5-ps	ENSMUST00000223928	processed_transcript		14	1	11162190	1442
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000138881	processed_transcript		5	-1	110108140	517
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000136722	retained_intron		5	-1	110107607	474
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000126376	protein_coding		6	1	116338064	407
ENSMUSG00000089785	transcribed_processed_pseudogene	Slc25a5-ps	ENSMUST00000162199	transcribed_processed_pseudogene		14	1	11179793	826
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000205066	retained_intron		6	1	116350385	3107
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000131774	retained_intron		5	-1	110107432	438
ENSMUSG00000114467	TEC	Gm48430	ENSMUST00000223773	TEC		14	-1	10018671	1449
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000112207	protein_coding		14	-1	30607822	2139
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000140884	protein_coding		6	1	116350892	382
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000144162	retained_intron		5	-1	110107711	362
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000129170	protein_coding		6	1	116350933	235
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000112206	protein_coding		14	-1	30607822	2215
ENSMUSG00000033434	protein_coding	Gtpbp6	ENSMUST00000149227	retained_intron		5	-1	110108161	455
ENSMUSG00000037737	protein_coding	Actrt3	ENSMUST00000047630	protein_coding	principal1	3	-1	30599939	1961
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000046045	protein_coding	principal2	3	-1	152266318	2564
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000130445	retained_intron		6	1	116376693	617
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000199423	protein_coding	alternative2	3	-1	152255311	2016
ENSMUSG00000116916	processed_pseudogene	Gm34967	ENSMUST00000231807	processed_pseudogene		16	-1	33824280	236
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000140701	retained_intron		14	-1	30600207	1289
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176789	nonsense_mediated_decay		7	1	30317020	477
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000196529	protein_coding		3	-1	152248264	1460
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000135901	protein_coding		6	1	116386224	747
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000112202	protein_coding		14	-1	30607822	2005
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000112203	protein_coding		14	-1	30607822	1927
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000198460	protein_coding	alternative2	3	-1	152255311	1785
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000199983	processed_transcript		3	-1	152244825	479
ENSMUSG00000025473	protein_coding	Adam8	ENSMUST00000026546	protein_coding	alternative2	7	-1	139992548	3100
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000198734	retained_intron		3	-1	152244136	452
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000123246	retained_intron		6	1	116386250	873
ENSMUSG00000034341	protein_coding	Wbp2	ENSMUST00000074628	protein_coding	principal3	11	-1	116086995	1826
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000127992	processed_transcript		6	1	116392524	579
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000176536	retained_intron		7	1	30317240	1079
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000200589	protein_coding		3	-1	152265768	1174
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000198750	protein_coding		3	-1	152255365	870
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000156014	processed_transcript		6	1	116402992	757
ENSMUSG00000019737	protein_coding	Syne4	ENSMUST00000177395	retained_intron		7	1	30317766	376
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000198404	retained_intron		3	-1	152248464	368
ENSMUSG00000034341	protein_coding	Wbp2	ENSMUST00000106444	protein_coding	alternative1	11	-1	116086995	1012
ENSMUSG00000087621	processed_transcript	1700003G18Rik	ENSMUST00000140689	sense_overlapping		7	-1	116093159	633
ENSMUSG00000025702	protein_coding	Marchf8	ENSMUST00000204918	processed_transcript		6	1	116405177	485
ENSMUSG00000107556	TEC	Gm44237	ENSMUST00000205183	TEC		6	1	116389462	936
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000196815	nonsense_mediated_decay		3	-1	152265795	574
ENSMUSG00000082115	processed_pseudogene	Gm15490	ENSMUST00000119894	processed_pseudogene		6	1	65757936	387
ENSMUSG00000087621	processed_transcript	1700003G18Rik	ENSMUST00000150518	sense_overlapping		7	-1	116093106	312
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000130736	retained_intron		14	-1	30626172	2517
ENSMUSG00000087621	processed_transcript	1700003G18Rik	ENSMUST00000206534	retained_intron		7	-1	116093098	1203
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000198648	protein_coding		3	-1	152263506	810
ENSMUSG00000034341	protein_coding	Wbp2	ENSMUST00000145278	processed_transcript		11	-1	116081485	789
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000135714	retained_intron		14	-1	30607345	749
ENSMUSG00000091900	processed_pseudogene	Gm4353	ENSMUST00000111755	processed_pseudogene		7	-1	116084558	978
ENSMUSG00000071415	protein_coding	Rpl23	ENSMUST00000103146	protein_coding	principal1	11	-1	97782437	1059
ENSMUSG00000025473	protein_coding	Adam8	ENSMUST00000106069	protein_coding	principal3	7	-1	139992562	3117
ENSMUSG00000034341	protein_coding	Wbp2	ENSMUST00000146339	processed_transcript		11	-1	116086995	821
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000196504	protein_coding		3	-1	152261535	608
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000145806	retained_intron		14	-1	30605671	642
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000112208	retained_intron		14	-1	30626210	1214
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000199685	protein_coding		3	-1	152262530	604
ENSMUSG00000034341	protein_coding	Wbp2	ENSMUST00000129532	processed_transcript		11	-1	116086972	958
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000227078	retained_intron		14	-1	30609295	652
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000197282	retained_intron		3	-1	152266350	655
ENSMUSG00000099467	unprocessed_pseudogene	Gm28116	ENSMUST00000189064	unprocessed_pseudogene		15	-1	75297099	387
ENSMUSG00000039103	protein_coding	Nexn	ENSMUST00000199752	retained_intron		3	-1	152253098	275
ENSMUSG00000071415	protein_coding	Rpl23	ENSMUST00000151118	processed_transcript		11	-1	97782276	728
ENSMUSG00000113966	TEC	Gm47980	ENSMUST00000222257	TEC		12	1	108960912	2921
ENSMUSG00000049537	protein_coding	Tecrl	ENSMUST00000053543	protein_coding	principal1	5	-1	83355195	2350
ENSMUSG00000030663	protein_coding	1110004F10Rik	ENSMUST00000205427	protein_coding		7	1	116039397	703
ENSMUSG00000071415	protein_coding	Rpl23	ENSMUST00000150955	processed_transcript		11	-1	97778635	480
ENSMUSG00000082546	processed_pseudogene	Gm14898	ENSMUST00000120202	processed_pseudogene		X	1	111830621	645
ENSMUSG00000101289	unprocessed_pseudogene	Gm3454	ENSMUST00000185571	unprocessed_pseudogene		15	-1	75314964	412
ENSMUSG00000071415	protein_coding	Rpl23	ENSMUST00000151965	processed_transcript		11	-1	97782362	658
ENSMUSG00000068086	protein_coding	Cyp2d9	ENSMUST00000089129	protein_coding	principal1	15	1	82452334	1712
ENSMUSG00000082752	processed_pseudogene	Gm14899	ENSMUST00000118673	processed_pseudogene		X	1	111860628	548
ENSMUSG00000021948	protein_coding	Prkcd	ENSMUST00000112211	protein_coding		14	-1	30626208	2851
ENSMUSG00000049537	protein_coding	Tecrl	ENSMUST00000146669	protein_coding		5	-1	83354956	641
ENSMUSG00000071415	protein_coding	Rpl23	ENSMUST00000128801	protein_coding		11	-1	97782382	334
ENSMUSG00000025903	protein_coding	Lypla1	ENSMUST00000134384	nonsense_mediated_decay		1	1	4807788	1136
ENSMUSG00000025658	protein_coding	Cnksr2	ENSMUST00000026750	protein_coding	principal1	X	-1	158043294	5738
ENSMUSG00000099414	unprocessed_pseudogene	Gm28113	ENSMUST00000188280	unprocessed_pseudogene		15	-1	75326728	229
ENSMUSG00000025473	protein_coding	Adam8	ENSMUST00000128332	retained_intron		7	-1	139992562	3669
ENSMUSG00000081822	processed_pseudogene	Gm15626	ENSMUST00000117478	processed_pseudogene		5	-1	83300452	868
ENSMUSG00000068086	protein_coding	Cyp2d9	ENSMUST00000229313	protein_coding		15	1	82452394	534
ENSMUSG00000101075	unprocessed_pseudogene	Gm29517	ENSMUST00000190744	unprocessed_pseudogene		15	1	75328240	351
ENSMUSG00000001052	protein_coding	Sec24b	ENSMUST00000001079	protein_coding	principal1	3	-1	130060907	5128
ENSMUSG00000068086	protein_coding	Cyp2d9	ENSMUST00000231136	protein_coding		15	1	82452394	820
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000033763	protein_coding	principal3	X	-1	73921944	962
ENSMUSG00000025473	protein_coding	Adam8	ENSMUST00000132903	retained_intron		7	-1	139980368	543
ENSMUSG00000100375	unprocessed_pseudogene	Gm28114	ENSMUST00000187232	unprocessed_pseudogene		15	-1	75351181	379
ENSMUSG00000068086	protein_coding	Cyp2d9	ENSMUST00000230191	nonsense_mediated_decay		15	1	82452408	1478
ENSMUSG00000025473	protein_coding	Adam8	ENSMUST00000148670	protein_coding		7	-1	139992562	2325
ENSMUSG00000025658	protein_coding	Cnksr2	ENSMUST00000112513	protein_coding		X	-1	158043294	4471
ENSMUSG00000070644	protein_coding	Etnk2	ENSMUST00000135222	protein_coding	principal2	1	1	133363572	2297
ENSMUSG00000059043	protein_coding	Olfr15	ENSMUST00000214590	protein_coding	principal1	16	1	3830898	6240
ENSMUSG00000001052	protein_coding	Sec24b	ENSMUST00000170163	retained_intron		3	-1	129984520	918
ENSMUSG00000102833	TEC	Gm9694	ENSMUST00000193347	TEC		1	1	155973318	1189
ENSMUSG00000001052	protein_coding	Sec24b	ENSMUST00000164758	processed_transcript		3	-1	129984282	482
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000022793	protein_coding	principal3	14	-1	54686931	4735
ENSMUSG00000068086	protein_coding	Cyp2d9	ENSMUST00000229473	nonsense_mediated_decay		15	1	82452569	758
ENSMUSG00000032289	protein_coding	Thsd4	ENSMUST00000098660	protein_coding	alternative2	9	-1	60511035	8796
ENSMUSG00000059043	protein_coding	Olfr15	ENSMUST00000214238	protein_coding	principal1	16	1	3830878	6135
ENSMUSG00000025473	protein_coding	Adam8	ENSMUST00000149915	processed_transcript		7	-1	139988430	367
ENSMUSG00000025658	protein_coding	Cnksr2	ENSMUST00000139664	retained_intron		X	-1	157866871	2412
ENSMUSG00000068086	protein_coding	Cyp2d9	ENSMUST00000230000	protein_coding		15	1	82454046	625
ENSMUSG00000001052	protein_coding	Sec24b	ENSMUST00000172324	retained_intron		3	-1	129990497	585
ENSMUSG00000025473	protein_coding	Adam8	ENSMUST00000173209	nonsense_mediated_decay		7	-1	139992508	343
ENSMUSG00000059043	protein_coding	Olfr15	ENSMUST00000080917	protein_coding	principal1	16	1	3838975	939
ENSMUSG00000025903	protein_coding	Lypla1	ENSMUST00000027036	protein_coding	principal1	1	1	4807823	2507
ENSMUSG00000001052	protein_coding	Sec24b	ENSMUST00000165873	protein_coding		3	-1	130040863	2295
ENSMUSG00000068086	protein_coding	Cyp2d9	ENSMUST00000230024	protein_coding		15	1	82454400	719
ENSMUSG00000070644	protein_coding	Etnk2	ENSMUST00000147909	retained_intron		1	1	133363576	2742
ENSMUSG00000083037	processed_pseudogene	Gm14900	ENSMUST00000120304	processed_pseudogene		X	1	112012720	733
ENSMUSG00000068086	protein_coding	Cyp2d9	ENSMUST00000229181	retained_intron		15	1	82455570	1255
ENSMUSG00000106576	unprocessed_pseudogene	Gm4866	ENSMUST00000197408	unprocessed_pseudogene		5	1	83863163	589
ENSMUSG00000070644	protein_coding	Etnk2	ENSMUST00000129213	protein_coding	alternative2	1	1	133365332	2074
ENSMUSG00000116472	unprocessed_pseudogene	Gm49421	ENSMUST00000230820	unprocessed_pseudogene		15	1	82443480	340
ENSMUSG00000115948	processed_pseudogene	Gm49419	ENSMUST00000231044	processed_pseudogene		15	-1	82449736	253
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000071044	protein_coding	principal1	6	1	72544391	1247
ENSMUSG00000070644	protein_coding	Etnk2	ENSMUST00000156832	retained_intron		1	1	133365764	457
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000147714	protein_coding		14	-1	54686616	4383
ENSMUSG00000032289	protein_coding	Thsd4	ENSMUST00000034829	protein_coding	principal3	9	-1	60141220	4816
ENSMUSG00000030663	protein_coding	1110004F10Rik	ENSMUST00000205450	protein_coding		7	1	116039712	931
ENSMUSG00000001052	protein_coding	Sec24b	ENSMUST00000165889	retained_intron		3	-1	130040833	829
ENSMUSG00000086742	processed_transcript	Gm16201	ENSMUST00000134312	processed_transcript		7	1	139950396	709
ENSMUSG00000034555	protein_coding	Tex16	ENSMUST00000131304	protein_coding	alternative2	X	1	112011007	447
ENSMUSG00000025903	protein_coding	Lypla1	ENSMUST00000150971	protein_coding		1	1	4807830	877
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000114389	protein_coding	alternative2	X	-1	73921924	1031
ENSMUSG00000001052	protein_coding	Sec24b	ENSMUST00000168644	protein_coding		3	-1	130041139	1235
ENSMUSG00000025903	protein_coding	Lypla1	ENSMUST00000119612	protein_coding		1	1	4807896	529
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000114072	protein_coding	principal1	6	1	72544537	1388
ENSMUSG00000070644	protein_coding	Etnk2	ENSMUST00000131450	processed_transcript		1	1	133367287	498
ENSMUSG00000025903	protein_coding	Lypla1	ENSMUST00000137887	protein_coding		1	1	4807898	444
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000155188	protein_coding		6	1	72545793	605
ENSMUSG00000060579	protein_coding	Fhit	ENSMUST00000161302	protein_coding	principal1	14	-1	10453458	860
ENSMUSG00000008153	protein_coding	Clstn3	ENSMUST00000112523	protein_coding	alternative2	6	-1	124462744	3703
ENSMUSG00000032289	protein_coding	Thsd4	ENSMUST00000126347	retained_intron		9	-1	60001588	4512
ENSMUSG00000086742	processed_transcript	Gm16201	ENSMUST00000139218	processed_transcript		7	1	139950440	2330
ENSMUSG00000115424	lincRNA	D130079A08Rik	ENSMUST00000228095	lincRNA		14	-1	104459336	2294
ENSMUSG00000001052	protein_coding	Sec24b	ENSMUST00000168908	retained_intron		3	-1	130030867	527
ENSMUSG00000086742	processed_transcript	Gm16201	ENSMUST00000210415	processed_transcript		7	1	139962684	642
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000114387	protein_coding	alternative2	X	-1	73921888	979
ENSMUSG00000032289	protein_coding	Thsd4	ENSMUST00000140824	protein_coding		9	-1	60522046	662
ENSMUSG00000001052	protein_coding	Sec24b	ENSMUST00000168675	processed_transcript		3	-1	130061553	306
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000126124	protein_coding		6	1	72547940	679
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000114391	protein_coding		X	-1	73921884	834
ENSMUSG00000115424	lincRNA	D130079A08Rik	ENSMUST00000227158	lincRNA		14	-1	104459316	939
ENSMUSG00000115424	lincRNA	D130079A08Rik	ENSMUST00000228613	lincRNA		14	-1	104459336	4192
ENSMUSG00000032289	protein_coding	Thsd4	ENSMUST00000146099	processed_transcript		9	-1	60511007	758
ENSMUSG00000025903	protein_coding	Lypla1	ENSMUST00000115529	protein_coding		1	1	4807911	930
ENSMUSG00000073795	protein_coding	Spef1l	ENSMUST00000146974	retained_intron		7	-1	139978723	1438
ENSMUSG00000032289	protein_coding	Thsd4	ENSMUST00000171654	protein_coding	alternative2	9	-1	60497126	8522
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000114071	protein_coding	principal1	6	1	72549273	1400
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000114390	protein_coding		X	-1	73921832	797
ENSMUSG00000008153	protein_coding	Clstn3	ENSMUST00000008297	protein_coding	principal3	6	-1	124464794	4014
ENSMUSG00000034555	protein_coding	Tex16	ENSMUST00000130247	protein_coding		X	1	112093496	3996
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000176858	retained_intron		9	1	107975570	3620
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000141211	processed_transcript		X	-1	73919907	479
ENSMUSG00000070708	protein_coding	Gtsf1l	ENSMUST00000094653	protein_coding	principal1	2	-1	163087855	822
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000150371	protein_coding		14	-1	54653682	2494
ENSMUSG00000111065	TEC	Gm47676	ENSMUST00000216899	TEC		9	-1	60393757	1965
ENSMUSG00000034555	protein_coding	Tex16	ENSMUST00000038546	protein_coding	principal2	X	1	112093520	3972
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000075082	retained_intron		9	1	107975575	3239
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000096316	protein_coding	alternative2	X	-1	73921828	892
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000137435	retained_intron		6	1	72549432	734
ENSMUSG00000025903	protein_coding	Lypla1	ENSMUST00000131119	protein_coding		1	1	4808237	660
ENSMUSG00000022315	protein_coding	Slc30a8	ENSMUST00000037240	protein_coding	principal1	15	1	52295553	1971
ENSMUSG00000096589	processed_pseudogene	Gm14992	ENSMUST00000179437	processed_pseudogene		X	-1	136380423	512
ENSMUSG00000008153	protein_coding	Clstn3	ENSMUST00000124998	protein_coding		6	-1	124433503	728
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000155705	protein_coding		6	1	72549451	515
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000167015	protein_coding	alternative2	14	-1	54653239	1746
ENSMUSG00000025903	protein_coding	Lypla1	ENSMUST00000141278	retained_intron		1	1	4836905	4456
ENSMUSG00000008153	protein_coding	Clstn3	ENSMUST00000238807	protein_coding		6	-1	124433503	1382
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000156168	retained_intron		6	1	72549458	407
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000176478	retained_intron		9	1	107975582	2341
ENSMUSG00000079460	protein_coding	4933403O08Rik	ENSMUST00000152343	protein_coding	principal2	X	1	112239049	1520
ENSMUSG00000112813	lincRNA	Gm34376	ENSMUST00000218529	lincRNA		10	1	71287729	2107
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000111484	protein_coding	alternative2	14	-1	54686931	4048
ENSMUSG00000095327	processed_pseudogene	Gm14996	ENSMUST00000178488	processed_pseudogene		X	-1	136396579	512
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000124446	retained_intron		X	-1	73920465	963
ENSMUSG00000008153	protein_coding	Clstn3	ENSMUST00000143283	retained_intron		6	-1	124438879	474
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000134809	protein_coding		6	1	72549652	500
ENSMUSG00000078314	lincRNA	Gm14762	ENSMUST00000122953	lincRNA		X	1	85826661	1430
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000176842	processed_transcript		9	1	107975606	360
ENSMUSG00000078314	lincRNA	Gm14762	ENSMUST00000105109	lincRNA		X	1	85825892	1771
ENSMUSG00000082358	processed_pseudogene	Gm14990	ENSMUST00000122354	processed_pseudogene		X	1	136430731	445
ENSMUSG00000008153	protein_coding	Clstn3	ENSMUST00000147947	retained_intron		6	-1	124450172	765
ENSMUSG00000079460	protein_coding	4933403O08Rik	ENSMUST00000132037	protein_coding	alternative2	X	1	112240583	999
ENSMUSG00000093732	lincRNA	Gm20609	ENSMUST00000177104	lincRNA		10	1	71310745	1527
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000152773	retained_intron		14	-1	54644536	844
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000126101	protein_coding		6	1	72552938	857
ENSMUSG00000060579	protein_coding	Fhit	ENSMUST00000162278	protein_coding	principal1	14	-1	11162032	981
ENSMUSG00000079460	protein_coding	4933403O08Rik	ENSMUST00000164272	protein_coding	principal2	X	1	112240474	1517
ENSMUSG00000112582	processed_pseudogene	Rpl19-ps2	ENSMUST00000219540	processed_pseudogene		10	1	71318766	590
ENSMUSG00000081286	processed_pseudogene	Gm14995	ENSMUST00000117135	processed_pseudogene		X	-1	136438541	391
ENSMUSG00000056737	protein_coding	Capg	ENSMUST00000127770	retained_intron		6	1	72555979	411
ENSMUSG00000008153	protein_coding	Clstn3	ENSMUST00000156040	processed_transcript		6	-1	124457885	391
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000138321	protein_coding		14	-1	54644210	807
ENSMUSG00000115334	processed_pseudogene	Gm17923	ENSMUST00000226677	processed_pseudogene		14	1	80214930	1423
ENSMUSG00000008153	protein_coding	Clstn3	ENSMUST00000150774	protein_coding		6	-1	124464101	366
ENSMUSG00000109156	protein_coding	Gm45194	ENSMUST00000207962	protein_coding	principal5	X	1	111891389	1991
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000177494	retained_intron		9	1	107975606	3371
ENSMUSG00000098091	processed_pseudogene	Gm16470	ENSMUST00000182456	processed_pseudogene		19	1	40212382	998
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000143076	retained_intron		X	-1	73921906	2156
ENSMUSG00000060579	protein_coding	Fhit	ENSMUST00000160340	protein_coding		14	-1	11162035	1094
ENSMUSG00000109156	protein_coding	Gm45194	ENSMUST00000207546	protein_coding	alternative2	X	1	111898534	570
ENSMUSG00000098125	processed_pseudogene	Gm9578	ENSMUST00000182354	processed_pseudogene		14	-1	80342485	753
ENSMUSG00000087542	processed_pseudogene	Gm15878	ENSMUST00000127561	processed_pseudogene		8	1	45949612	306
ENSMUSG00000031937	protein_coding	Vstm5	ENSMUST00000034413	protein_coding	principal1	9	1	15239045	1991
ENSMUSG00000118414	unitary_pseudogene	Gm50463	ENSMUST00000238756	unitary_pseudogene		6	1	124466765	332
ENSMUSG00000025058	protein_coding	5430427O19Rik	ENSMUST00000113976	protein_coding	principal1	X	1	85870354	3754
ENSMUSG00000083392	processed_pseudogene	Gm6335	ENSMUST00000118081	processed_pseudogene		X	1	112162554	1194
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000177392	nonsense_mediated_decay		9	1	107975655	3527
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000149591	retained_intron		X	-1	73921855	649
ENSMUSG00000115036	processed_pseudogene	Gm49043	ENSMUST00000227575	processed_pseudogene		14	1	80442405	466
ENSMUSG00000030663	protein_coding	1110004F10Rik	ENSMUST00000032899	protein_coding	principal1	7	1	116093301	1479
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000177039	nonsense_mediated_decay		9	1	107975956	2915
ENSMUSG00000031388	protein_coding	Naa10	ENSMUST00000153929	retained_intron		X	-1	73921852	355
ENSMUSG00000060579	protein_coding	Fhit	ENSMUST00000161895	protein_coding		14	-1	11125591	570
ENSMUSG00000115346	processed_pseudogene	Gm19120	ENSMUST00000228193	processed_pseudogene		14	1	80834332	688
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000175933	retained_intron		9	1	107976308	362
ENSMUSG00000034127	protein_coding	Tspan8	ENSMUST00000217900	protein_coding		10	1	115816832	526
ENSMUSG00000030663	protein_coding	1110004F10Rik	ENSMUST00000106608	protein_coding		7	1	116093336	927
ENSMUSG00000086152	lincRNA	Gm11454	ENSMUST00000144092	lincRNA		2	1	163122606	714
ENSMUSG00000115716	processed_pseudogene	Gm49044	ENSMUST00000226419	processed_pseudogene		14	1	80930737	301
ENSMUSG00000107552	antisense	Gm44096	ENSMUST00000203171	antisense		6	-1	124494368	504
ENSMUSG00000080266	processed_pseudogene	Gm14772	ENSMUST00000116562	processed_pseudogene		X	-1	86033169	514
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000176743	retained_intron		9	1	107976891	443
ENSMUSG00000115297	processed_pseudogene	Gm49045	ENSMUST00000227800	processed_pseudogene		14	1	80974293	375
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000176673	retained_intron		9	1	107979739	2353
ENSMUSG00000060579	protein_coding	Fhit	ENSMUST00000161179	retained_intron		14	-1	11125179	553
ENSMUSG00000086036	lincRNA	Gm14254	ENSMUST00000136371	lincRNA		2	-1	163156106	296
ENSMUSG00000022383	protein_coding	Ppara	ENSMUST00000134880	processed_transcript		15	1	85734983	360
ENSMUSG00000060579	protein_coding	Fhit	ENSMUST00000162817	protein_coding		14	-1	11125562	519
ENSMUSG00000115542	lincRNA	Gm49046	ENSMUST00000226987	lincRNA		14	1	81100768	389
ENSMUSG00000060579	protein_coding	Fhit	ENSMUST00000160956	protein_coding		14	-1	11162035	405
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000177096	retained_intron		9	1	107980890	551
ENSMUSG00000030663	protein_coding	1110004F10Rik	ENSMUST00000106607	protein_coding		7	1	116093341	1153
ENSMUSG00000060579	protein_coding	Fhit	ENSMUST00000179394	protein_coding	principal1	14	-1	10421597	453
ENSMUSG00000115465	processed_pseudogene	Cyp2c73-ps	ENSMUST00000228079	processed_pseudogene		14	1	81370045	1047
ENSMUSG00000114691	TEC	Gm48438	ENSMUST00000224071	TEC		14	-1	9904368	2448
ENSMUSG00000030663	protein_coding	1110004F10Rik	ENSMUST00000151254	nonsense_mediated_decay		7	1	116093366	1430
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000177071	retained_intron		9	1	107983025	503
ENSMUSG00000031390	protein_coding	Avpr2	ENSMUST00000033765	protein_coding	principal1	X	1	73892102	1812
ENSMUSG00000086021	lincRNA	Gm15767	ENSMUST00000153786	lincRNA		6	-1	147243801	544
ENSMUSG00000117282	lincRNA	Gm49898	ENSMUST00000233603	lincRNA		17	1	13195878	599
ENSMUSG00000032596	protein_coding	Uba7	ENSMUST00000176340	retained_intron		9	1	107983035	452
ENSMUSG00000103041	antisense	Gm37305	ENSMUST00000195714	antisense		3	1	65957758	4279
ENSMUSG00000086021	lincRNA	Gm15767	ENSMUST00000153521	lincRNA		6	-1	147243793	297
ENSMUSG00000117282	lincRNA	Gm49898	ENSMUST00000233574	lincRNA		17	1	13195950	582
ENSMUSG00000031390	protein_coding	Avpr2	ENSMUST00000131088	processed_transcript		X	1	73892103	477
ENSMUSG00000035454	protein_coding	Samt3	ENSMUST00000047945	protein_coding	principal1	X	1	86044199	1048
ENSMUSG00000117051	TEC	Gm10512	ENSMUST00000233049	TEC		17	1	13205042	1168
ENSMUSG00000021078	protein_coding	Tomm20l	ENSMUST00000220834	nonsense_mediated_decay		12	1	71111428	551
ENSMUSG00000031390	protein_coding	Avpr2	ENSMUST00000101470	protein_coding		X	1	73892110	2787
ENSMUSG00000102224	processed_transcript	4930447F24Rik	ENSMUST00000194283	antisense		9	1	108133718	464
ENSMUSG00000073795	protein_coding	Spef1l	ENSMUST00000097970	protein_coding	principal3	7	-1	139978755	1161
ENSMUSG00000031390	protein_coding	Avpr2	ENSMUST00000114395	protein_coding		X	1	73892114	936
ENSMUSG00000102224	processed_transcript	4930447F24Rik	ENSMUST00000194140	antisense		9	1	108136855	1341
ENSMUSG00000082021	unprocessed_pseudogene	Gm14991	ENSMUST00000119913	unprocessed_pseudogene		X	1	136486970	598
ENSMUSG00000102224	processed_transcript	4930447F24Rik	ENSMUST00000195536	retained_intron		9	1	108137328	291
ENSMUSG00000073458	protein_coding	Smok2a	ENSMUST00000238835	protein_coding	alternative2	17	1	13221188	1787
ENSMUSG00000073458	protein_coding	Smok2a	ENSMUST00000080647	protein_coding	principal2	17	1	13221188	1787
ENSMUSG00000073795	protein_coding	Spef1l	ENSMUST00000210254	protein_coding	alternative2	7	-1	139978719	952
ENSMUSG00000044447	protein_coding	Dock5	ENSMUST00000039135	protein_coding	principal1	14	-1	67933432	9988
ENSMUSG00000073795	protein_coding	Spef1l	ENSMUST00000209335	protein_coding	alternative2	7	-1	139978719	898
ENSMUSG00000085816	lincRNA	Gm13052	ENSMUST00000125582	lincRNA		4	-1	142346475	769
ENSMUSG00000093749	antisense	4921523L03Rik	ENSMUST00000175729	antisense		9	-1	107995656	1186
ENSMUSG00000021078	protein_coding	Tomm20l	ENSMUST00000021482	protein_coding	principal1	12	1	71111445	578
ENSMUSG00000038527	protein_coding	C1rl	ENSMUST00000049124	protein_coding	principal1	6	1	124493113	3010
ENSMUSG00000073795	protein_coding	Spef1l	ENSMUST00000121412	protein_coding	alternative2	7	-1	139978723	1176
ENSMUSG00000021078	protein_coding	Tomm20l	ENSMUST00000221962	retained_intron		12	1	71111470	584
ENSMUSG00000083579	processed_pseudogene	Gm15538	ENSMUST00000121410	processed_pseudogene		16	1	3926428	313
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000151487	retained_intron		14	-1	54645866	635
ENSMUSG00000001687	protein_coding	Ubl3	ENSMUST00000079324	protein_coding	principal1	5	-1	148552662	2537
ENSMUSG00000044447	protein_coding	Dock5	ENSMUST00000226033	retained_intron		14	-1	67764959	1846
ENSMUSG00000039789	protein_coding	Zfp597	ENSMUST00000175990	processed_transcript		16	-1	3865824	401
ENSMUSG00000034177	protein_coding	Rnf43	ENSMUST00000134684	retained_intron		11	1	87662722	3116
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000124271	retained_intron		14	-1	54648578	1125
ENSMUSG00000091144	protein_coding	Phf11c	ENSMUST00000166912	protein_coding	principal1	14	-1	59395381	3459
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000133706	retained_intron		14	-1	54646047	803
ENSMUSG00000034177	protein_coding	Rnf43	ENSMUST00000123658	processed_transcript		11	1	87663087	950
ENSMUSG00000044447	protein_coding	Dock5	ENSMUST00000224823	retained_intron		14	-1	67933442	3954
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000167495	processed_transcript		14	-1	54650268	1352
ENSMUSG00000039789	protein_coding	Zfp597	ENSMUST00000090522	protein_coding	principal1	16	-1	3872396	5668
ENSMUSG00000026227	protein_coding	2810459M11Rik	ENSMUST00000027429	protein_coding	alternative2	1	1	86045863	1225
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000125767	retained_intron		14	-1	54648342	696
ENSMUSG00000039789	protein_coding	Zfp597	ENSMUST00000138857	processed_transcript		16	-1	3884505	1524
ENSMUSG00000079323	protein_coding	Gm20661	ENSMUST00000176382	retained_intron		9	1	107983058	1581
ENSMUSG00000102179	TEC	Gm37868	ENSMUST00000195578	TEC		1	1	128143614	2735
ENSMUSG00000039789	protein_coding	Zfp597	ENSMUST00000119599	processed_transcript		16	-1	3884561	1842
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000123875	protein_coding		14	-1	54653685	696
ENSMUSG00000001687	protein_coding	Ubl3	ENSMUST00000201595	protein_coding	principal1	5	-1	148552789	2064
ENSMUSG00000039789	protein_coding	Zfp597	ENSMUST00000130254	retained_intron		16	-1	3871733	726
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000170299	processed_transcript		14	-1	54649907	570
ENSMUSG00000079323	protein_coding	Gm20661	ENSMUST00000176166	retained_intron		9	1	107983093	1311
ENSMUSG00000025056	protein_coding	Nr0b1	ENSMUST00000026036	protein_coding	principal1	X	1	86191764	1808
ENSMUSG00000091283	antisense	Gm17234	ENSMUST00000172128	antisense		1	-1	57917111	392
ENSMUSG00000026227	protein_coding	2810459M11Rik	ENSMUST00000165824	protein_coding	principal3	1	1	86045863	3331
ENSMUSG00000026111	protein_coding	Unc50	ENSMUST00000114925	protein_coding	principal1	1	1	37430139	1094
ENSMUSG00000047098	protein_coding	Rnf31	ENSMUST00000019443	protein_coding	principal1	14	1	55591708	3485
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000136909	processed_transcript		14	-1	54653681	496
ENSMUSG00000001687	protein_coding	Ubl3	ENSMUST00000201688	processed_transcript		5	-1	148537590	551
ENSMUSG00000030062	protein_coding	Rpn1	ENSMUST00000032143	protein_coding	principal1	6	1	88084482	3633
ENSMUSG00000001687	protein_coding	Ubl3	ENSMUST00000201139	processed_transcript		5	-1	148551664	356
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000137763	processed_transcript		14	-1	54653681	369
ENSMUSG00000054939	protein_coding	Zfp174	ENSMUST00000041778	protein_coding	principal1	16	1	3847268	5897
ENSMUSG00000001687	protein_coding	Ubl3	ENSMUST00000202938	processed_transcript		5	-1	148551656	384
ENSMUSG00000001687	protein_coding	Ubl3	ENSMUST00000201597	retained_intron		5	-1	148552698	6113
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000129700	retained_intron		14	-1	54663706	695
ENSMUSG00000001687	protein_coding	Ubl3	ENSMUST00000164904	protein_coding	principal1	5	-1	148552789	2001
ENSMUSG00000030062	protein_coding	Rpn1	ENSMUST00000204838	nonsense_mediated_decay		6	1	88084563	789
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000149713	retained_intron		14	-1	54653691	460
ENSMUSG00000079323	protein_coding	Gm20661	ENSMUST00000177368	nonsense_mediated_decay	principal1	9	1	107983287	900
ENSMUSG00000085048	antisense	Gm15537	ENSMUST00000126677	antisense		16	-1	3929357	485
ENSMUSG00000029913	protein_coding	Prdm5	ENSMUST00000031976	protein_coding	principal1	6	1	65778988	2155
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000141993	retained_intron		14	-1	54664677	1001
ENSMUSG00000106899	TEC	1700013A02Rik	ENSMUST00000202969	TEC		5	-1	148553861	645
ENSMUSG00000030062	protein_coding	Rpn1	ENSMUST00000203813	retained_intron		6	1	88093817	855
ENSMUSG00000107098	processed_pseudogene	Gm29815	ENSMUST00000202418	processed_pseudogene		5	-1	148613644	178
ENSMUSG00000022383	protein_coding	Ppara	ENSMUST00000109423	protein_coding	principal1	15	1	85735564	2519
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000125265	protein_coding		14	-1	54686060	947
ENSMUSG00000087630	antisense	Gm11513	ENSMUST00000138855	antisense		11	1	95032759	751
ENSMUSG00000030062	protein_coding	Rpn1	ENSMUST00000204024	retained_intron		6	1	88099287	821
ENSMUSG00000026111	protein_coding	Unc50	ENSMUST00000027285	protein_coding	principal1	1	1	37430170	1414
ENSMUSG00000093619	antisense	4930535L15Rik	ENSMUST00000175891	antisense		9	-1	108002404	536
ENSMUSG00000030062	protein_coding	Rpn1	ENSMUST00000204164	retained_intron		6	1	88101571	673
ENSMUSG00000029913	protein_coding	Prdm5	ENSMUST00000173538	retained_intron		6	1	65779022	1938
ENSMUSG00000092218	processed_transcript	Gm20529	ENSMUST00000173683	processed_transcript		9	1	108051675	203
ENSMUSG00000022383	protein_coding	Ppara	ENSMUST00000138813	processed_transcript		15	1	85735639	367
ENSMUSG00000026111	protein_coding	Unc50	ENSMUST00000144617	protein_coding		1	1	37430177	808
ENSMUSG00000093575	protein_coding	Gm20695	ENSMUST00000176233	protein_coding	principal1	16	1	3884648	1012
ENSMUSG00000029913	protein_coding	Prdm5	ENSMUST00000081219	protein_coding		6	1	65779022	984
ENSMUSG00000029913	protein_coding	Prdm5	ENSMUST00000031973	protein_coding		6	1	65779025	1488
ENSMUSG00000026111	protein_coding	Unc50	ENSMUST00000193979	protein_coding		1	1	37430186	818
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000134808	processed_transcript		14	-1	54686633	2555
ENSMUSG00000047098	protein_coding	Rnf31	ENSMUST00000137296	retained_intron		14	1	55591744	3293
ENSMUSG00000022383	protein_coding	Ppara	ENSMUST00000109422	protein_coding	principal1	15	1	85735776	3413
ENSMUSG00000029913	protein_coding	Prdm5	ENSMUST00000205168	retained_intron		6	1	65779094	4168
ENSMUSG00000093575	protein_coding	Gm20695	ENSMUST00000146935	processed_transcript		16	1	3898233	652
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000021486	protein_coding	principal1	12	-1	71136673	794
ENSMUSG00000086770	antisense	Gm15351	ENSMUST00000123920	antisense		8	-1	12915619	419
ENSMUSG00000029913	protein_coding	Prdm5	ENSMUST00000172638	protein_coding		6	1	65779101	1714
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000132242	retained_intron		14	-1	54686615	452
ENSMUSG00000074607	protein_coding	Tox2	ENSMUST00000109428	protein_coding	alternative2	2	1	163203125	2947
ENSMUSG00000086770	antisense	Gm15351	ENSMUST00000153095	antisense		8	-1	12915758	406
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000191016	retained_intron		1	1	128103301	2438
ENSMUSG00000029913	protein_coding	Prdm5	ENSMUST00000205155	retained_intron		6	1	65935091	1920
ENSMUSG00000026111	protein_coding	Unc50	ENSMUST00000118059	protein_coding	principal1	1	1	37430202	1179
ENSMUSG00000086770	antisense	Gm15351	ENSMUST00000150686	antisense		8	-1	12915473	271
ENSMUSG00000042106	protein_coding	Inka1	ENSMUST00000048568	protein_coding	principal1	9	-1	107985879	1025
ENSMUSG00000022185	protein_coding	Acin1	ENSMUST00000148754	protein_coding	alternative2	14	-1	54653701	2373
ENSMUSG00000074607	protein_coding	Tox2	ENSMUST00000128999	protein_coding		2	1	163204553	425
ENSMUSG00000074607	protein_coding	Tox2	ENSMUST00000099110	protein_coding	alternative2	2	1	163225363	2166
ENSMUSG00000026111	protein_coding	Unc50	ENSMUST00000193713	protein_coding		1	1	37430208	333
ENSMUSG00000085689	antisense	Gm16838	ENSMUST00000144594	antisense		6	-1	65779249	816
ENSMUSG00000047098	protein_coding	Rnf31	ENSMUST00000140178	protein_coding		14	1	55592275	2817
ENSMUSG00000074195	protein_coding	Clca4b	ENSMUST00000098549	protein_coding	principal1	3	-1	144932529	2997
ENSMUSG00000022383	protein_coding	Ppara	ENSMUST00000057979	protein_coding	principal1	15	1	85736131	2063
ENSMUSG00000074607	protein_coding	Tox2	ENSMUST00000148599	protein_coding		2	1	163320378	600
ENSMUSG00000042106	protein_coding	Inka1	ENSMUST00000175914	protein_coding		9	-1	107985632	563
ENSMUSG00000092394	processed_pseudogene	Gm20445	ENSMUST00000061905	processed_pseudogene		6	1	65882779	565
ENSMUSG00000047098	protein_coding	Rnf31	ENSMUST00000126544	retained_intron		14	1	55592467	266
ENSMUSG00000047098	protein_coding	Rnf31	ENSMUST00000133903	retained_intron		14	1	55592881	4939
ENSMUSG00000005983	protein_coding	1700037C18Rik	ENSMUST00000177519	processed_transcript		16	-1	3908653	661
ENSMUSG00000026111	protein_coding	Unc50	ENSMUST00000134184	retained_intron		1	1	37431344	730
ENSMUSG00000074607	protein_coding	Tox2	ENSMUST00000165937	protein_coding	principal2	2	1	163225454	1675
ENSMUSG00000097170	antisense	Gm16982	ENSMUST00000181275	antisense		7	-1	141613747	2620
ENSMUSG00000022383	protein_coding	Ppara	ENSMUST00000136453	processed_transcript		15	1	85772214	315
ENSMUSG00000047098	protein_coding	Rnf31	ENSMUST00000227664	retained_intron		14	1	55595125	720
ENSMUSG00000082076	processed_pseudogene	Gm8659	ENSMUST00000120024	processed_pseudogene		X	1	158150096	1084
ENSMUSG00000047098	protein_coding	Rnf31	ENSMUST00000227708	nonsense_mediated_decay		14	1	55601156	552
ENSMUSG00000040822	protein_coding	1700123O20Rik	ENSMUST00000038539	protein_coding	principal1	14	1	54686216	1843
ENSMUSG00000083136	processed_pseudogene	Gm15170	ENSMUST00000121593	processed_pseudogene		X	1	158174826	2023
ENSMUSG00000040822	protein_coding	1700123O20Rik	ENSMUST00000226235	processed_transcript		14	1	54686230	375
ENSMUSG00000032593	protein_coding	Amigo3	ENSMUST00000085060	protein_coding	principal1	9	1	108053159	2543
ENSMUSG00000081797	processed_pseudogene	Gm8662	ENSMUST00000118644	processed_pseudogene		X	1	158248797	574
ENSMUSG00000083830	processed_pseudogene	Gm8839	ENSMUST00000121279	processed_pseudogene		X	1	86270712	1645
ENSMUSG00000084270	processed_pseudogene	Gm15177	ENSMUST00000120491	processed_pseudogene		X	1	158302921	577
ENSMUSG00000084210	processed_pseudogene	Gm15168	ENSMUST00000121057	processed_pseudogene		X	-1	158503901	316
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000156560	protein_coding		8	1	12873806	521
ENSMUSG00000082026	processed_pseudogene	Gm5764	ENSMUST00000118817	processed_pseudogene		X	1	158833435	885
ENSMUSG00000040822	protein_coding	1700123O20Rik	ENSMUST00000228027	protein_coding		14	1	54686237	811
ENSMUSG00000083316	processed_pseudogene	Gm15185	ENSMUST00000117397	processed_pseudogene		X	-1	159097092	746
ENSMUSG00000040822	protein_coding	1700123O20Rik	ENSMUST00000227269	protein_coding	principal1	14	1	54687044	893
ENSMUSG00000058248	protein_coding	Kcnh1	ENSMUST00000078470	protein_coding	principal3	1	1	192190774	7242
ENSMUSG00000083625	unprocessed_pseudogene	Gm15188	ENSMUST00000121264	unprocessed_pseudogene		X	-1	159104985	704
ENSMUSG00000083127	processed_pseudogene	Gm15189	ENSMUST00000121164	processed_pseudogene		X	1	159105915	1966
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000166120	protein_coding	principal1	12	-1	71136648	990
ENSMUSG00000035427	protein_coding	Mageb4	ENSMUST00000113969	protein_coding	principal1	X	-1	86256219	2403
ENSMUSG00000031424	protein_coding	Kir3dl1	ENSMUST00000113105	protein_coding	principal1	X	1	136518013	1544
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000221797	protein_coding		12	-1	71136675	2564
ENSMUSG00000040840	antisense	4930579G18Rik	ENSMUST00000167763	antisense		14	1	54650511	968
ENSMUSG00000032586	protein_coding	Traip	ENSMUST00000194538	retained_intron		9	1	107950136	3680
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000221892	protein_coding		12	-1	71136627	734
ENSMUSG00000031424	protein_coding	Kir3dl1	ENSMUST00000113104	protein_coding		X	1	136517999	1031
ENSMUSG00000034127	protein_coding	Tspan8	ENSMUST00000080630	protein_coding	principal1	10	1	115817271	1156
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000221559	protein_coding	principal1	12	-1	71136634	718
ENSMUSG00000035427	protein_coding	Mageb4	ENSMUST00000096378	protein_coding	principal1	X	-1	86305093	2401
ENSMUSG00000058248	protein_coding	Kcnh1	ENSMUST00000110844	protein_coding	alternative2	1	1	192190774	7161
ENSMUSG00000082033	unprocessed_pseudogene	Mageb10-ps	ENSMUST00000119697	unprocessed_pseudogene		X	-1	86301328	1407
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000221367	protein_coding	principal1	12	-1	71136597	836
ENSMUSG00000034127	protein_coding	Tspan8	ENSMUST00000179196	protein_coding	principal1	10	1	115817283	1381
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000220482	protein_coding	principal1	12	-1	71136612	859
ENSMUSG00000015133	protein_coding	Lrrk1	ENSMUST00000167705	processed_transcript		7	-1	66262470	557
ENSMUSG00000058248	protein_coding	Kcnh1	ENSMUST00000151152	protein_coding		1	1	192434740	5165
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000221178	protein_coding		12	-1	71136633	529
ENSMUSG00000005983	protein_coding	1700037C18Rik	ENSMUST00000006139	nonsense_mediated_decay		16	-1	3907757	848
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000221815	protein_coding		12	-1	71136684	1193
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000220841	processed_transcript		12	-1	71136609	362
ENSMUSG00000034127	protein_coding	Tspan8	ENSMUST00000035563	protein_coding	principal1	10	1	115817284	1244
ENSMUSG00000021079	protein_coding	Timm9	ENSMUST00000223544	retained_intron		12	-1	71136635	1098
ENSMUSG00000034177	protein_coding	Rnf43	ENSMUST00000092800	protein_coding	principal1	11	1	87664274	4037
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000188894	protein_coding	alternative2	1	-1	71653172	8043
ENSMUSG00000027525	protein_coding	Phactr3	ENSMUST00000108917	protein_coding		2	1	178118975	4858
ENSMUSG00000005983	protein_coding	1700037C18Rik	ENSMUST00000115859	protein_coding	principal2	16	-1	3908689	2592
ENSMUSG00000034177	protein_coding	Rnf43	ENSMUST00000121782	protein_coding		11	1	87664549	2640
ENSMUSG00000112513	antisense	4930422I22Rik	ENSMUST00000220081	antisense		10	-1	115869522	1510
ENSMUSG00000034177	protein_coding	Rnf43	ENSMUST00000040089	protein_coding		11	1	87699897	3670
ENSMUSG00000038967	protein_coding	Pdk2	ENSMUST00000038431	protein_coding	principal1	11	-1	95041354	2246
ENSMUSG00000034177	protein_coding	Rnf43	ENSMUST00000162740	retained_intron		11	1	87727426	704
ENSMUSG00000005983	protein_coding	1700037C18Rik	ENSMUST00000177323	protein_coding	alternative2	16	-1	3907702	915
ENSMUSG00000005983	protein_coding	1700037C18Rik	ENSMUST00000177221	protein_coding	alternative2	16	-1	3907651	434
ENSMUSG00000034177	protein_coding	Rnf43	ENSMUST00000124625	retained_intron		11	1	87729374	378
ENSMUSG00000038967	protein_coding	Pdk2	ENSMUST00000126730	processed_transcript		11	-1	95028576	467
ENSMUSG00000005983	protein_coding	1700037C18Rik	ENSMUST00000123235	protein_coding		16	-1	3908623	340
ENSMUSG00000034177	protein_coding	Rnf43	ENSMUST00000150866	processed_transcript		11	1	87733920	364
ENSMUSG00000038967	protein_coding	Pdk2	ENSMUST00000129262	processed_transcript		11	-1	95029424	572
ENSMUSG00000059674	protein_coding	Cdh24	ENSMUST00000067784	protein_coding	principal1	14	-1	54641364	3489
ENSMUSG00000034177	protein_coding	Rnf43	ENSMUST00000165679	protein_coding	principal1	11	1	87663087	4310
ENSMUSG00000022103	protein_coding	Gfra2	ENSMUST00000022699	protein_coding	principal1	14	1	70890120	3472
ENSMUSG00000038967	protein_coding	Pdk2	ENSMUST00000141712	processed_transcript		11	-1	95040558	741
ENSMUSG00000059674	protein_coding	Cdh24	ENSMUST00000227124	protein_coding		14	-1	54637541	760
ENSMUSG00000038967	protein_coding	Pdk2	ENSMUST00000155857	processed_transcript		11	-1	95040875	661
ENSMUSG00000085972	sense_intronic	1110028F11Rik	ENSMUST00000137077	sense_intronic		11	1	87701396	837
ENSMUSG00000022103	protein_coding	Gfra2	ENSMUST00000227697	protein_coding		14	1	70890528	1323
ENSMUSG00000090544	processed_pseudogene	Gm6576	ENSMUST00000169678	processed_pseudogene		15	1	27025328	883
ENSMUSG00000085972	sense_intronic	1110028F11Rik	ENSMUST00000142895	sense_intronic		11	1	87702123	383
ENSMUSG00000008730	protein_coding	Hipk1	ENSMUST00000118317	protein_coding	principal1	3	-1	103791563	7939
ENSMUSG00000031182	protein_coding	4930447F04Rik	ENSMUST00000033525	protein_coding	principal1	X	-1	66304224	703
ENSMUSG00000008730	protein_coding	Hipk1	ENSMUST00000106845	protein_coding		3	-1	103791075	3967
ENSMUSG00000057439	protein_coding	Kir3dl2	ENSMUST00000113108	protein_coding	principal1	X	-1	136544056	1932
ENSMUSG00000110067	protein_coding	6330411D24Rik	ENSMUST00000211105	processed_transcript		4	-1	143074839	1568
ENSMUSG00000110067	protein_coding	6330411D24Rik	ENSMUST00000238915	protein_coding	principal1	4	-1	143073766	249
ENSMUSG00000022103	protein_coding	Gfra2	ENSMUST00000227633	protein_coding		14	1	70941886	1480
ENSMUSG00000103678	TEC	Gm37624	ENSMUST00000193751	TEC		4	1	142790808	219
ENSMUSG00000057439	protein_coding	Kir3dl2	ENSMUST00000072125	protein_coding	principal1	X	-1	136469041	1734
ENSMUSG00000115385	processed_pseudogene	Gm19311	ENSMUST00000227943	processed_pseudogene		14	-1	81703671	466
ENSMUSG00000101662	sense_intronic	Gm28499	ENSMUST00000191576	sense_intronic		1	1	89568765	666
ENSMUSG00000115455	lincRNA	Gm41219	ENSMUST00000227374	lincRNA		14	1	81685810	352
ENSMUSG00000055044	protein_coding	Pdlim1	ENSMUST00000068439	protein_coding	principal1	19	-1	40271616	2571
ENSMUSG00000115175	processed_pseudogene	Gm18525	ENSMUST00000228131	processed_pseudogene		14	1	81839170	719
ENSMUSG00000073457	protein_coding	Smok2b	ENSMUST00000162940	protein_coding	principal1	17	1	13230257	2306
ENSMUSG00000008730	protein_coding	Hipk1	ENSMUST00000029438	protein_coding	principal1	3	-1	103791256	4185
ENSMUSG00000055044	protein_coding	Pdlim1	ENSMUST00000182540	retained_intron		19	-1	40223356	715
ENSMUSG00000115731	processed_pseudogene	Gm19050	ENSMUST00000226942	processed_pseudogene		14	1	82121431	805
ENSMUSG00000073457	protein_coding	Smok2b	ENSMUST00000059824	protein_coding	principal1	17	1	13234871	1584
ENSMUSG00000055044	protein_coding	Pdlim1	ENSMUST00000182813	retained_intron		19	-1	40230805	666
ENSMUSG00000115554	processed_pseudogene	Gm19111	ENSMUST00000227785	processed_pseudogene		15	1	27367939	1503
ENSMUSG00000055044	protein_coding	Pdlim1	ENSMUST00000182432	protein_coding		19	-1	40271842	692
ENSMUSG00000073481	protein_coding	Mtarc2	ENSMUST00000068725	protein_coding	principal1	1	-1	184845881	1917
ENSMUSG00000111809	lincRNA	Gm49334	ENSMUST00000215297	lincRNA		9	1	60527419	488
ENSMUSG00000117278	lincRNA	Gm36684	ENSMUST00000233737	lincRNA		17	1	13330748	3095
ENSMUSG00000111667	processed_pseudogene	Gm47740	ENSMUST00000213119	processed_pseudogene		9	1	60535660	595
ENSMUSG00000055044	protein_coding	Pdlim1	ENSMUST00000182636	retained_intron		19	-1	40271616	2835
ENSMUSG00000008730	protein_coding	Hipk1	ENSMUST00000137078	nonsense_mediated_decay		3	-1	103791561	3546
ENSMUSG00000008730	protein_coding	Hipk1	ENSMUST00000200071	retained_intron		3	-1	103751065	2952
ENSMUSG00000117239	transcribed_processed_pseudogene	Gpr31c	ENSMUST00000232958	processed_transcript		17	-1	13345880	4307
ENSMUSG00000117239	transcribed_processed_pseudogene	Gpr31c	ENSMUST00000233475	transcribed_processed_pseudogene		17	-1	13345786	955
ENSMUSG00000111761	lincRNA	9230112J17Rik	ENSMUST00000216749	lincRNA		9	-1	60545882	2333
ENSMUSG00000038014	protein_coding	Fam120a	ENSMUST00000060805	protein_coding	principal1	13	-1	48968017	5105
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000183312	retained_intron		17	-1	46501071	500
ENSMUSG00000008730	protein_coding	Hipk1	ENSMUST00000126351	retained_intron		3	-1	103751014	545
ENSMUSG00000048776	protein_coding	Pthlh	ENSMUST00000052296	protein_coding	principal1	6	-1	147264167	1603
ENSMUSG00000031283	protein_coding	Chrdl1	ENSMUST00000063029	protein_coding	alternative2	X	-1	143390099	3550
ENSMUSG00000111761	lincRNA	9230112J17Rik	ENSMUST00000217430	lincRNA		9	-1	60545876	764
ENSMUSG00000115476	processed_pseudogene	Gm49047	ENSMUST00000227380	processed_pseudogene		14	-1	82128850	232
ENSMUSG00000048776	protein_coding	Pthlh	ENSMUST00000204197	protein_coding	principal1	6	-1	147264183	1281
ENSMUSG00000115825	lincRNA	Gm49048	ENSMUST00000228751	lincRNA		14	-1	82142578	476
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000129002	nonsense_mediated_decay		3	-1	65958162	2229
ENSMUSG00000032586	protein_coding	Traip	ENSMUST00000049348	protein_coding	principal1	9	1	107950956	2706
ENSMUSG00000002957	protein_coding	Ap2a2	ENSMUST00000003038	protein_coding	principal1	7	1	141562173	4646
ENSMUSG00000008730	protein_coding	Hipk1	ENSMUST00000135634	retained_intron		3	-1	103791275	2430
ENSMUSG00000115051	processed_pseudogene	Gm49049	ENSMUST00000227503	processed_pseudogene		14	1	82770391	187
ENSMUSG00000103876	processed_pseudogene	Gm17806	ENSMUST00000195844	processed_pseudogene		3	1	9656520	383
ENSMUSG00000085754	antisense	Gm15886	ENSMUST00000154868	antisense		3	1	103771952	294
ENSMUSG00000111512	processed_pseudogene	Gm17853	ENSMUST00000215435	processed_pseudogene		9	1	60548195	1349
ENSMUSG00000081023	processed_pseudogene	Gm15766	ENSMUST00000118025	processed_pseudogene		6	1	147271837	813
ENSMUSG00000115138	lincRNA	Gm36899	ENSMUST00000227384	lincRNA		15	-1	27463449	1237
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000188674	protein_coding	alternative2	1	-1	71653172	7680
ENSMUSG00000032586	protein_coding	Traip	ENSMUST00000192567	processed_transcript		9	1	107950967	1949
ENSMUSG00000115847	processed_pseudogene	Gm49050	ENSMUST00000228792	processed_pseudogene		14	-1	82856344	381
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000189821	protein_coding	alternative2	1	-1	71653172	7410
ENSMUSG00000032586	protein_coding	Traip	ENSMUST00000194271	protein_coding		9	1	107950988	515
ENSMUSG00000115031	processed_pseudogene	Gm49051	ENSMUST00000228219	processed_pseudogene		14	1	82892837	270
ENSMUSG00000115393	processed_pseudogene	Gm49052	ENSMUST00000226219	processed_pseudogene		14	-1	83496901	504
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000188381	protein_coding		1	1	128103321	1130
ENSMUSG00000074211	protein_coding	Sdhaf1	ENSMUST00000098586	protein_coding	principal1	7	-1	30323895	2490
ENSMUSG00000032586	protein_coding	Traip	ENSMUST00000193715	processed_transcript		9	1	107960391	383
ENSMUSG00000002957	protein_coding	Ap2a2	ENSMUST00000201320	retained_intron		7	1	141562208	1549
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000154585	nonsense_mediated_decay		3	-1	65958169	2364
ENSMUSG00000085754	antisense	Gm15886	ENSMUST00000123155	antisense		3	1	103771973	1250
ENSMUSG00000002957	protein_coding	Ap2a2	ENSMUST00000201261	protein_coding		7	1	141562530	590
ENSMUSG00000115780	processed_pseudogene	Gm49053	ENSMUST00000226600	processed_pseudogene		14	1	83752648	412
ENSMUSG00000032586	protein_coding	Traip	ENSMUST00000194191	retained_intron		9	1	107962172	400
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000187938	protein_coding	alternative2	1	-1	71653172	7965
ENSMUSG00000085754	antisense	Gm15886	ENSMUST00000138430	antisense		3	1	103772308	785
ENSMUSG00000115006	lincRNA	Gm49054	ENSMUST00000228928	lincRNA		14	-1	83939741	141
ENSMUSG00000032586	protein_coding	Traip	ENSMUST00000195803	retained_intron		9	1	107962233	844
ENSMUSG00000115282	processed_pseudogene	Gm49055	ENSMUST00000227519	processed_pseudogene		14	-1	83983963	370
ENSMUSG00000085754	antisense	Gm15886	ENSMUST00000152867	antisense		3	1	103777415	569
ENSMUSG00000063176	protein_coding	Olfr955	ENSMUST00000219910	processed_transcript		9	-1	39471944	351
ENSMUSG00000115043	lincRNA	Gm32455	ENSMUST00000228897	lincRNA		14	-1	84075290	2260
ENSMUSG00000063176	protein_coding	Olfr955	ENSMUST00000220176	protein_coding	principal1	9	-1	39471944	1452
ENSMUSG00000063176	protein_coding	Olfr955	ENSMUST00000073946	protein_coding	principal1	9	-1	39470724	945
ENSMUSG00000073481	protein_coding	Mtarc2	ENSMUST00000161359	processed_transcript		1	-1	184827482	572
ENSMUSG00000073481	protein_coding	Mtarc2	ENSMUST00000161341	retained_intron		1	-1	184823035	968
ENSMUSG00000092615	unprocessed_pseudogene	Olfr762-ps1	ENSMUST00000172948	unprocessed_pseudogene		17	-1	38315011	927
ENSMUSG00000106733	lincRNA	Gm36186	ENSMUST00000200820	lincRNA		5	1	148711466	2052
ENSMUSG00000073481	protein_coding	Mtarc2	ENSMUST00000162261	processed_transcript		1	-1	184827267	633
ENSMUSG00000031283	protein_coding	Chrdl1	ENSMUST00000074660	protein_coding	principal3	X	-1	143394184	4096
ENSMUSG00000086494	lincRNA	2210417A02Rik	ENSMUST00000150265	lincRNA		5	1	148741840	550
ENSMUSG00000073481	protein_coding	Mtarc2	ENSMUST00000160318	retained_intron		1	-1	184819443	433
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000190780	protein_coding	alternative2	1	-1	71653172	7694
ENSMUSG00000073481	protein_coding	Mtarc2	ENSMUST00000162866	processed_transcript		1	-1	184827257	475
ENSMUSG00000031283	protein_coding	Chrdl1	ENSMUST00000207415	protein_coding		X	-1	143393901	640
ENSMUSG00000085740	lincRNA	4930505K14Rik	ENSMUST00000155504	lincRNA		5	1	148777963	515
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000123128	protein_coding		9	1	75071188	11702
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000122919	retained_intron		3	-1	65958199	4134
ENSMUSG00000096840	protein_coding	Olfr136	ENSMUST00000208539	protein_coding	principal1	17	1	38329831	1773
ENSMUSG00000096840	protein_coding	Olfr136	ENSMUST00000208525	protein_coding	principal1	17	1	38329851	2534
ENSMUSG00000030301	protein_coding	Ccdc91	ENSMUST00000203659	protein_coding		6	1	147475828	144
ENSMUSG00000087647	lincRNA	Gm15407	ENSMUST00000136919	lincRNA		5	1	148820767	634
ENSMUSG00000031283	protein_coding	Chrdl1	ENSMUST00000112878	protein_coding	alternative2	X	-1	143394262	4050
ENSMUSG00000037375	protein_coding	Hhat	ENSMUST00000128619	protein_coding	alternative2	1	-1	192771213	1819
ENSMUSG00000096840	protein_coding	Olfr136	ENSMUST00000214035	protein_coding	principal1	17	1	38329853	1925
ENSMUSG00000073481	protein_coding	Mtarc2	ENSMUST00000159293	processed_transcript		1	-1	184845808	931
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000136871	retained_intron		9	1	75071206	1919
ENSMUSG00000096840	protein_coding	Olfr136	ENSMUST00000216963	protein_coding	principal1	17	1	38329853	1821
ENSMUSG00000098166	sense_intronic	Gm26978	ENSMUST00000182843	sense_intronic		8	-1	33885747	304
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000055226	protein_coding	principal3	1	-1	71653175	8315
ENSMUSG00000021266	protein_coding	Wars	ENSMUST00000109848	protein_coding	alternative2	12	-1	108894174	2831
ENSMUSG00000073481	protein_coding	Mtarc2	ENSMUST00000161821	protein_coding		1	-1	184846451	687
ENSMUSG00000096840	protein_coding	Olfr136	ENSMUST00000077203	protein_coding	principal1	17	1	38335159	939
ENSMUSG00000031283	protein_coding	Chrdl1	ENSMUST00000166406	protein_coding	principal3	X	-1	143393896	2605
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000186129	protein_coding	alternative2	1	-1	71653200	7797
ENSMUSG00000073481	protein_coding	Mtarc2	ENSMUST00000162501	processed_transcript		1	-1	184845571	651
ENSMUSG00000037375	protein_coding	Hhat	ENSMUST00000044190	protein_coding	principal2	1	-1	192771223	2839
ENSMUSG00000111687	unprocessed_pseudogene	Olfr956-ps1	ENSMUST00000216492	unprocessed_pseudogene		9	-1	39474638	867
ENSMUSG00000071103	protein_coding	1700029J07Rik	ENSMUST00000095323	protein_coding	principal1	8	-1	45975252	2740
ENSMUSG00000073481	protein_coding	Mtarc2	ENSMUST00000160982	retained_intron		1	-1	184845847	4248
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000155282	protein_coding	principal5	9	1	75071386	6372
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000229385	processed_transcript		15	-1	81960842	1291
ENSMUSG00000037375	protein_coding	Hhat	ENSMUST00000192585	non_stop_decay		1	-1	192771218	1800
ENSMUSG00000037375	protein_coding	Hhat	ENSMUST00000154755	processed_transcript		1	-1	192726208	3247
ENSMUSG00000071103	protein_coding	1700029J07Rik	ENSMUST00000098786	protein_coding	principal1	8	-1	45975252	1340
ENSMUSG00000037375	protein_coding	Hhat	ENSMUST00000123721	processed_transcript		1	-1	192687706	2892
ENSMUSG00000071103	protein_coding	1700029J07Rik	ENSMUST00000239252	nonsense_mediated_decay		8	-1	45975440	1606
ENSMUSG00000021266	protein_coding	Wars	ENSMUST00000160477	nonsense_mediated_decay		12	-1	108894137	2878
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000123531	nonsense_mediated_decay		9	1	75071565	3002
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000185408	retained_intron		1	-1	71609567	4022
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000136731	protein_coding	alternative1	9	1	75071600	6480
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000186575	retained_intron		1	-1	71591071	495
ENSMUSG00000037375	protein_coding	Hhat	ENSMUST00000154203	processed_transcript		1	-1	192737280	673
ENSMUSG00000021266	protein_coding	Wars	ENSMUST00000161410	protein_coding	alternative2	12	-1	108893198	2764
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000142181	retained_intron		9	1	75140699	679
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000187627	nonsense_mediated_decay		1	-1	71600368	1190
ENSMUSG00000037375	protein_coding	Hhat	ENSMUST00000192946	processed_transcript		1	-1	192770992	408
ENSMUSG00000036958	protein_coding	Cst11	ENSMUST00000028934	protein_coding	principal1	2	-1	148771497	615
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000186985	nonsense_mediated_decay		1	-1	71602376	816
ENSMUSG00000117177	unprocessed_pseudogene	Gm49810	ENSMUST00000233489	unprocessed_pseudogene		17	1	38379708	207
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000188092	retained_intron		1	-1	71602844	703
ENSMUSG00000117135	unprocessed_pseudogene	Gm49811	ENSMUST00000233967	unprocessed_pseudogene		17	-1	38393421	115
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000189160	retained_intron		1	-1	71624344	2778
ENSMUSG00000002325	protein_coding	Irf9	ENSMUST00000134863	protein_coding	alternative2	14	1	55603571	2959
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000186613	nonsense_mediated_decay		1	-1	71641288	426
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000186940	protein_coding		1	-1	71653161	1350
ENSMUSG00000092322	protein_coding	Esp36	ENSMUST00000172814	protein_coding	alternative2	17	-1	38420185	1117
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000029416	protein_coding	principal1	3	-1	65958249	2169
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000186879	retained_intron		1	-1	71653172	2104
ENSMUSG00000026193	protein_coding	Fn1	ENSMUST00000186736	protein_coding		1	-1	71653172	671
ENSMUSG00000021266	protein_coding	Wars	ENSMUST00000161154	protein_coding	principal3	12	-1	108893197	1824
ENSMUSG00000092322	protein_coding	Esp36	ENSMUST00000177882	protein_coding	principal2	17	-1	38420185	1117
ENSMUSG00000092566	processed_pseudogene	Gm20409	ENSMUST00000173457	processed_pseudogene		17	-1	38443135	130
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000136604	processed_transcript		9	1	75184184	2640
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000135719	nonsense_mediated_decay		3	-1	65958032	1981
ENSMUSG00000021266	protein_coding	Wars	ENSMUST00000162748	nonsense_mediated_decay		12	-1	108894101	896
ENSMUSG00000002325	protein_coding	Irf9	ENSMUST00000130697	protein_coding	principal3	14	1	55603985	2459
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000149032	retained_intron		9	1	75184247	801
ENSMUSG00000075220	protein_coding	Olfr993	ENSMUST00000099926	protein_coding	principal1	2	-1	85414877	945
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000129281	protein_coding		9	1	75185895	684
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000141051	processed_transcript		2	-1	173659539	4466
ENSMUSG00000021266	protein_coding	Wars	ENSMUST00000160974	retained_intron		12	-1	108888417	652
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000142153	retained_intron		3	-1	65958163	3414
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000148144	protein_coding		9	1	75185994	1758
ENSMUSG00000021266	protein_coding	Wars	ENSMUST00000162952	retained_intron		12	-1	108875281	698
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000149729	retained_intron		3	-1	65947998	475
ENSMUSG00000002325	protein_coding	Irf9	ENSMUST00000136109	retained_intron		14	1	55604577	796
ENSMUSG00000112981	TEC	5033424D13Rik	ENSMUST00000221779	TEC		12	1	108878769	648
ENSMUSG00000062649	protein_coding	Olfr44	ENSMUST00000215065	protein_coding	alternative2	9	-1	39493993	3578
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000130384	protein_coding		9	1	75185996	650
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000144810	nonsense_mediated_decay		3	-1	65956856	896
ENSMUSG00000002325	protein_coding	Irf9	ENSMUST00000138037	protein_coding	alternative2	14	1	55604579	2343
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000143355	retained_intron		9	1	75189939	671
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000150304	retained_intron		3	-1	65950978	692
ENSMUSG00000040877	protein_coding	Wdr25	ENSMUST00000221377	protein_coding		12	1	108893631	578
ENSMUSG00000062649	protein_coding	Olfr44	ENSMUST00000216316	protein_coding	alternative2	9	-1	39493995	1078
ENSMUSG00000034593	protein_coding	Myo5a	ENSMUST00000153404	retained_intron		9	1	75193773	651
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000149160	retained_intron		3	-1	65958181	3222
ENSMUSG00000090001	processed_pseudogene	Gm9719	ENSMUST00000162765	processed_pseudogene		9	-1	75099140	543
ENSMUSG00000062649	protein_coding	Olfr44	ENSMUST00000077757	protein_coding	principal2	9	-1	39493988	1071
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000145186	nonsense_mediated_decay		3	-1	65956889	622
ENSMUSG00000089651	processed_pseudogene	Gm16353	ENSMUST00000159458	processed_pseudogene		9	-1	75134181	1223
ENSMUSG00000070284	protein_coding	Gmppb	ENSMUST00000112295	protein_coding	principal1	9	1	108049242	2702
ENSMUSG00000040877	protein_coding	Wdr25	ENSMUST00000220667	protein_coding		12	1	108894272	352
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000132998	retained_intron		3	-1	65951868	573
ENSMUSG00000083083	processed_pseudogene	Gm15382	ENSMUST00000118011	processed_pseudogene		15	1	91822687	537
ENSMUSG00000027525	protein_coding	Phactr3	ENSMUST00000108916	protein_coding		2	1	178119179	2656
ENSMUSG00000002325	protein_coding	Irf9	ENSMUST00000145680	retained_intron		14	1	55605820	3869
ENSMUSG00000040877	protein_coding	Wdr25	ENSMUST00000220495	nonsense_mediated_decay		12	1	108894293	362
ENSMUSG00000070284	protein_coding	Gmppb	ENSMUST00000150700	processed_transcript		9	1	108049269	163
ENSMUSG00000002325	protein_coding	Irf9	ENSMUST00000126269	retained_intron		14	1	55607275	630
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000146284	retained_intron		3	-1	65952993	563
ENSMUSG00000002325	protein_coding	Irf9	ENSMUST00000226275	protein_coding		14	1	55607818	681
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000151763	processed_transcript		2	-1	173659539	5637
ENSMUSG00000027829	protein_coding	Ccnl1	ENSMUST00000148623	retained_intron		3	-1	65957653	457
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000071462	protein_coding		15	-1	81960869	1059
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000153162	retained_intron		2	-1	173659539	4552
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000142320	processed_transcript		2	-1	173659539	755
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000154908	retained_intron		2	-1	173591313	2399
ENSMUSG00000027525	protein_coding	Phactr3	ENSMUST00000103066	protein_coding	principal4	2	1	178141933	2680
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000149947	processed_transcript		2	-1	173590762	1964
ENSMUSG00000027444	protein_coding	Cstdc1	ENSMUST00000028933	protein_coding	principal1	2	1	148782009	602
ENSMUSG00000070284	protein_coding	Gmppb	ENSMUST00000137284	retained_intron		9	1	108049289	1853
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000148111	processed_transcript		2	-1	173659368	737
ENSMUSG00000022033	protein_coding	Pbk	ENSMUST00000022612	protein_coding	principal1	14	1	65805837	1720
ENSMUSG00000027525	protein_coding	Phactr3	ENSMUST00000108915	protein_coding		2	1	178175349	2694
ENSMUSG00000030301	protein_coding	Ccdc91	ENSMUST00000032441	protein_coding	principal1	6	1	147475871	2459
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000133185	retained_intron		2	-1	173659535	520
ENSMUSG00000000682	protein_coding	Cd52	ENSMUST00000145122	processed_transcript		4	-1	134095041	380
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000151988	protein_coding		16	1	3872375	719
ENSMUSG00000092316	processed_pseudogene	Gm6726	ENSMUST00000172786	processed_pseudogene		17	-1	38478914	681
ENSMUSG00000022033	protein_coding	Pbk	ENSMUST00000152130	processed_transcript		14	1	65805937	416
ENSMUSG00000117127	unprocessed_pseudogene	Gm49812	ENSMUST00000233918	unprocessed_pseudogene		17	-1	38524755	300
ENSMUSG00000037730	protein_coding	Mynn	ENSMUST00000192715	protein_coding	principal1	3	1	30602065	5555
ENSMUSG00000070284	protein_coding	Gmppb	ENSMUST00000047947	protein_coding	principal1	9	1	108049325	1429
ENSMUSG00000030301	protein_coding	Ccdc91	ENSMUST00000156106	nonsense_mediated_decay		6	1	147475991	353
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000187900	protein_coding	alternative2	1	1	128103324	3982
ENSMUSG00000022033	protein_coding	Pbk	ENSMUST00000139644	protein_coding		14	1	65806232	451
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000148213	retained_intron		2	-1	173659504	582
ENSMUSG00000070284	protein_coding	Gmppb	ENSMUST00000145330	retained_intron		9	1	108049455	1052
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000140992	processed_transcript		2	-1	173659640	367
ENSMUSG00000103658	processed_pseudogene	Gm37201	ENSMUST00000191845	processed_pseudogene		9	1	108160279	523
ENSMUSG00000092244	protein_coding	Esp34	ENSMUST00000173055	protein_coding	alternative2	17	1	38554192	1413
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000127022	processed_transcript		2	-1	173608818	418
ENSMUSG00000102377	antisense	Gm37974	ENSMUST00000193668	antisense		9	-1	107936394	220
ENSMUSG00000092244	protein_coding	Esp34	ENSMUST00000178654	protein_coding	principal2	17	1	38554192	1413
ENSMUSG00000055897	transcribed_unprocessed_pseudogene	Ppp4r1l-ps	ENSMUST00000132669	transcribed_unprocessed_pseudogene		2	-1	173629550	2767
ENSMUSG00000015133	protein_coding	Lrrk1	ENSMUST00000015277	protein_coding	principal1	7	-1	66388350	7465
ENSMUSG00000037797	protein_coding	Adh4	ENSMUST00000162260	processed_transcript		3	1	138415466	257
ENSMUSG00000040877	protein_coding	Wdr25	ENSMUST00000047115	protein_coding	principal1	12	1	108894317	4356
ENSMUSG00000027525	protein_coding	Phactr3	ENSMUST00000103065	protein_coding	alternative1	2	1	178193084	2642
ENSMUSG00000093456	protein_coding	Gm20662	ENSMUST00000176454	retained_intron		9	1	107996349	1853
ENSMUSG00000015133	protein_coding	Lrrk1	ENSMUST00000137181	retained_intron		7	-1	66265571	2442
ENSMUSG00000030301	protein_coding	Ccdc91	ENSMUST00000111614	processed_transcript		6	1	147531401	838
ENSMUSG00000027525	protein_coding	Phactr3	ENSMUST00000141272	retained_intron		2	1	178327556	825
ENSMUSG00000027525	protein_coding	Phactr3	ENSMUST00000133267	protein_coding		2	1	178327792	1668
ENSMUSG00000087704	antisense	Gm14978	ENSMUST00000129000	antisense		2	-1	121296008	304
ENSMUSG00000040877	protein_coding	Wdr25	ENSMUST00000223054	processed_transcript		12	1	108912732	397
ENSMUSG00000093456	protein_coding	Gm20662	ENSMUST00000176356	nonsense_mediated_decay	principal5	9	1	107997989	601
ENSMUSG00000000682	protein_coding	Cd52	ENSMUST00000000696	protein_coding	principal1	4	-1	134095082	514
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000023112	protein_coding	principal1	15	-1	81960930	1300
ENSMUSG00000093456	protein_coding	Gm20662	ENSMUST00000176459	nonsense_mediated_decay	alternative2	9	1	107998027	428
ENSMUSG00000072660	antisense	Gm6288	ENSMUST00000100778	antisense		6	-1	147475815	1590
ENSMUSG00000040877	protein_coding	Wdr25	ENSMUST00000221510	protein_coding		12	1	109020802	1600
ENSMUSG00000015133	protein_coding	Lrrk1	ENSMUST00000145954	nonsense_mediated_decay		7	-1	66282217	3374
ENSMUSG00000072660	antisense	Gm6288	ENSMUST00000128634	antisense		6	-1	147476046	772
ENSMUSG00000072660	antisense	Gm6288	ENSMUST00000169225	antisense		6	-1	147472330	516
ENSMUSG00000040877	protein_coding	Wdr25	ENSMUST00000167816	protein_coding	principal1	12	1	108894272	2657
ENSMUSG00000103466	TEC	Gm37247	ENSMUST00000192549	TEC		9	-1	108189727	730
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000129406	retained_intron		15	-1	81953504	1107
ENSMUSG00000000682	protein_coding	Cd52	ENSMUST00000137445	processed_transcript		4	-1	134095038	506
ENSMUSG00000015133	protein_coding	Lrrk1	ENSMUST00000131239	retained_intron		7	-1	66269800	482
ENSMUSG00000107793	TEC	4933406L23Rik	ENSMUST00000203567	TEC		6	-1	147531309	1509
ENSMUSG00000024978	protein_coding	Gpam	ENSMUST00000236859	nonsense_mediated_decay		19	-1	55103091	3304
ENSMUSG00000113478	processed_pseudogene	Gm18405	ENSMUST00000220743	processed_pseudogene		12	-1	108991651	511
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000142752	protein_coding		17	-1	56564516	438
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000219402	nonsense_mediated_decay		4	1	134060815	413
ENSMUSG00000015133	protein_coding	Lrrk1	ENSMUST00000130438	processed_transcript		7	-1	66343265	1744
ENSMUSG00000066607	protein_coding	Insyn1	ENSMUST00000085658	protein_coding	principal1	9	1	58488603	2139
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000124111	protein_coding		17	-1	56564567	2636
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000155781	nonsense_mediated_decay		15	-1	81960842	580
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000176625	protein_coding		16	1	3884659	876
ENSMUSG00000015133	protein_coding	Lrrk1	ENSMUST00000154893	retained_intron		7	-1	66388307	1559
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000229120	nonsense_mediated_decay		15	-1	81960833	927
ENSMUSG00000109119	antisense	Gm44752	ENSMUST00000207140	antisense		7	1	66309195	3305
ENSMUSG00000066607	protein_coding	Insyn1	ENSMUST00000217624	retained_intron		9	1	58488962	1095
ENSMUSG00000066607	protein_coding	Insyn1	ENSMUST00000216294	protein_coding	principal1	9	1	58489608	1601
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000125593	retained_intron		15	-1	81952264	407
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000135093	nonsense_mediated_decay		16	1	3884668	807
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000182485	protein_coding	principal2	17	-1	46546388	7848
ENSMUSG00000033020	protein_coding	Polr2f	ENSMUST00000230271	protein_coding	principal1	15	1	79141009	885
ENSMUSG00000037797	protein_coding	Adh4	ENSMUST00000161312	protein_coding		3	1	138415487	695
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000147645	processed_transcript		15	-1	81960858	678
ENSMUSG00000113409	processed_pseudogene	Gm8288	ENSMUST00000223406	processed_pseudogene		13	1	75802706	593
ENSMUSG00000037730	protein_coding	Mynn	ENSMUST00000195396	nonsense_mediated_decay		3	1	30602631	4775
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000229957	processed_transcript		15	-1	81960838	696
ENSMUSG00000037730	protein_coding	Mynn	ENSMUST00000047502	protein_coding		3	1	30602637	3394
ENSMUSG00000033020	protein_coding	Polr2f	ENSMUST00000040077	protein_coding		15	1	79141351	452
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000230229	protein_coding		15	-1	81960833	612
ENSMUSG00000033020	protein_coding	Polr2f	ENSMUST00000229973	nonsense_mediated_decay		15	1	79141366	414
ENSMUSG00000037730	protein_coding	Mynn	ENSMUST00000194587	retained_intron		3	1	30602639	1522
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000044766	protein_coding	principal1	2	-1	130840134	6628
ENSMUSG00000103583	antisense	Gm38325	ENSMUST00000194507	antisense		1	-1	165495167	1377
ENSMUSG00000033020	protein_coding	Polr2f	ENSMUST00000229978	retained_intron		15	1	79149807	1958
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000108061	protein_coding	alternative2	11	1	85353167	3810
ENSMUSG00000022474	protein_coding	Pmm1	ENSMUST00000147442	retained_intron		15	-1	81960764	620
ENSMUSG00000033020	protein_coding	Polr2f	ENSMUST00000229762	retained_intron		15	1	79150914	509
ENSMUSG00000103059	processed_pseudogene	Gm18186	ENSMUST00000192239	processed_pseudogene		1	1	165493422	1580
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000108062	protein_coding	alternative2	11	1	85353167	3724
ENSMUSG00000115770	processed_pseudogene	Gm49056	ENSMUST00000227210	processed_pseudogene		14	1	84114799	291
ENSMUSG00000037730	protein_coding	Mynn	ENSMUST00000195751	nonsense_mediated_decay		3	1	30602644	3474
ENSMUSG00000115612	processed_pseudogene	Gm29800	ENSMUST00000228759	processed_pseudogene		14	-1	84126874	389
ENSMUSG00000037730	protein_coding	Mynn	ENSMUST00000193736	retained_intron		3	1	30613511	373
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000143537	nonsense_mediated_decay		16	1	3884683	1279
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000108056	protein_coding		11	1	85353167	2925
ENSMUSG00000115227	processed_pseudogene	Gm49057	ENSMUST00000227972	processed_pseudogene		14	1	84391310	270
ENSMUSG00000033313	protein_coding	Fbxl8	ENSMUST00000036221	protein_coding	principal1	8	1	105264648	1901
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000148932	processed_transcript		2	-1	130731176	425
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000036288	protein_coding	principal2	1	1	128103324	4795
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000138758	protein_coding		2	-1	130730909	636
ENSMUSG00000031309	protein_coding	Rps6ka3	ENSMUST00000033671	protein_coding	principal3	X	1	159255858	7244
ENSMUSG00000083828	processed_pseudogene	Gm15006	ENSMUST00000121419	processed_pseudogene		X	1	136544874	1122
ENSMUSG00000032310	protein_coding	Cyp1a2	ENSMUST00000034860	protein_coding	principal1	9	-1	57683703	1940
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000139684	nonsense_mediated_decay		2	-1	130719929	497
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000185389	retained_intron		1	1	128103331	8458
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000187023	protein_coding		1	1	128141964	1661
ENSMUSG00000021591	protein_coding	Glrx	ENSMUST00000022082	protein_coding	principal1	13	1	75839868	1345
ENSMUSG00000055024	protein_coding	Ep300	ENSMUST00000185375	processed_transcript		15	1	81585351	2997
ENSMUSG00000082504	processed_pseudogene	Gm15003	ENSMUST00000118884	processed_pseudogene		X	-1	136553430	446
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000186375	protein_coding	principal1	16	1	3884683	2350
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000185944	processed_transcript		15	-1	79134916	3025
ENSMUSG00000033313	protein_coding	Fbxl8	ENSMUST00000126923	nonsense_mediated_decay		8	1	105264682	1913
ENSMUSG00000037797	protein_coding	Adh4	ENSMUST00000013458	protein_coding	principal1	3	1	138415495	1314
ENSMUSG00000032310	protein_coding	Cyp1a2	ENSMUST00000215792	retained_intron		9	-1	57682036	526
ENSMUSG00000055013	protein_coding	Agap1	ENSMUST00000027521	protein_coding	principal4	1	1	89454806	11921
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000187557	protein_coding		1	1	128141987	453
ENSMUSG00000021591	protein_coding	Glrx	ENSMUST00000223120	protein_coding	principal1	13	1	75839901	1333
ENSMUSG00000024978	protein_coding	Gpam	ENSMUST00000235957	protein_coding	principal1	19	-1	55127216	6172
ENSMUSG00000083826	processed_pseudogene	Gm13039	ENSMUST00000118638	processed_pseudogene		4	1	143166603	794
ENSMUSG00000082669	processed_pseudogene	Gm5393	ENSMUST00000119106	processed_pseudogene		X	1	112302196	272
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000110243	protein_coding		2	-1	130840145	1984
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000189317	protein_coding		1	1	128151814	1040
ENSMUSG00000081838	processed_pseudogene	Gm13038	ENSMUST00000119886	processed_pseudogene		4	1	143152572	459
ENSMUSG00000031309	protein_coding	Rps6ka3	ENSMUST00000112493	protein_coding	alternative1	X	1	159210307	3671
ENSMUSG00000021591	protein_coding	Glrx	ENSMUST00000220523	protein_coding		13	1	75839910	493
ENSMUSG00000115671	lincRNA	Gm49289	ENSMUST00000227525	lincRNA		14	1	71087270	1201
ENSMUSG00000021591	protein_coding	Glrx	ENSMUST00000222530	retained_intron		13	1	75840076	4228
ENSMUSG00000055013	protein_coding	Agap1	ENSMUST00000190096	protein_coding	alternative1	1	1	89454874	4078
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000154396	protein_coding		11	1	85466159	2789
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000187605	retained_intron		1	1	128171631	6513
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000147949	nonsense_mediated_decay		16	1	3884686	653
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000142596	protein_coding		11	1	85509627	2141
ENSMUSG00000024978	protein_coding	Gpam	ENSMUST00000061856	protein_coding	principal1	19	-1	55099451	3832
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000191274	retained_intron		1	1	128174693	597
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000092822	protein_coding		11	1	85509638	2085
ENSMUSG00000115139	lincRNA	Gm4251	ENSMUST00000228402	lincRNA		14	1	71251273	526
ENSMUSG00000055013	protein_coding	Agap1	ENSMUST00000185417	retained_intron		1	1	89455256	4451
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000185471	retained_intron		1	1	128176837	4982
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000149662	protein_coding		11	1	85801821	412
ENSMUSG00000055013	protein_coding	Agap1	ENSMUST00000074945	protein_coding		1	1	89580236	10065
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000185853	protein_coding		1	1	128179143	549
ENSMUSG00000024978	protein_coding	Gpam	ENSMUST00000237146	protein_coding	principal1	19	-1	55127203	3206
ENSMUSG00000031309	protein_coding	Rps6ka3	ENSMUST00000126686	protein_coding		X	1	159255782	657
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000140832	retained_intron		16	1	3884713	869
ENSMUSG00000055013	protein_coding	Agap1	ENSMUST00000212924	protein_coding		1	1	89789163	395
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000190056	protein_coding		1	1	128181741	1155
ENSMUSG00000115139	lincRNA	Gm4251	ENSMUST00000226131	lincRNA		14	1	71251284	658
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000189982	retained_intron		1	1	128192832	3709
ENSMUSG00000103252	TEC	Gm37521	ENSMUST00000193177	TEC		1	1	89825481	2045
ENSMUSG00000104288	TEC	Gm37455	ENSMUST00000191993	TEC		14	-1	71371530	529
ENSMUSG00000031309	protein_coding	Rps6ka3	ENSMUST00000112491	protein_coding		X	1	159303281	716
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000115860	protein_coding	principal1	16	1	3884769	2303
ENSMUSG00000115529	antisense	9630013A20Rik	ENSMUST00000228857	antisense		14	-1	84476424	2341
ENSMUSG00000024978	protein_coding	Gpam	ENSMUST00000236422	protein_coding		19	-1	55127238	628
ENSMUSG00000031309	protein_coding	Rps6ka3	ENSMUST00000149939	retained_intron		X	1	159362406	755
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000145281	processed_transcript		11	1	85821413	620
ENSMUSG00000115286	lincRNA	4930429C20Rik	ENSMUST00000226329	lincRNA		14	1	71421012	503
ENSMUSG00000031309	protein_coding	Rps6ka3	ENSMUST00000142668	processed_transcript		X	1	159362321	382
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000140562	processed_transcript		11	1	85821966	253
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000190288	retained_intron		1	1	128206992	6449
ENSMUSG00000118099	antisense	Gm31356	ENSMUST00000237370	antisense		19	1	55099502	1560
ENSMUSG00000031309	protein_coding	Rps6ka3	ENSMUST00000112492	protein_coding		X	1	159255925	722
ENSMUSG00000115529	antisense	9630013A20Rik	ENSMUST00000228125	antisense		14	-1	84476424	2038
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000175809	protein_coding		16	1	3894375	279
ENSMUSG00000098064	processed_pseudogene	Gm9192	ENSMUST00000183221	processed_pseudogene		14	-1	71820551	985
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000176224	protein_coding		16	1	3894375	501
ENSMUSG00000056211	protein_coding	R3hdm1	ENSMUST00000188570	retained_intron		1	1	128235379	1588
ENSMUSG00000031309	protein_coding	Rps6ka3	ENSMUST00000148570	protein_coding		X	1	159256126	517
ENSMUSG00000115529	antisense	9630013A20Rik	ENSMUST00000226704	antisense		14	-1	84476370	2136
ENSMUSG00000102009	processed_transcript	4933400F21Rik	ENSMUST00000186098	antisense		1	-1	89683908	1007
ENSMUSG00000103497	TEC	Gm37407	ENSMUST00000194793	TEC		1	1	128163214	1316
ENSMUSG00000005982	protein_coding	Naa60	ENSMUST00000150655	protein_coding	principal1	16	1	3894375	1166
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000227683	protein_coding	alternative2	4	1	134060815	5578
ENSMUSG00000031309	protein_coding	Rps6ka3	ENSMUST00000156648	protein_coding		X	1	159276276	386
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000130343	processed_transcript		11	1	85640704	1252
ENSMUSG00000115529	antisense	9630013A20Rik	ENSMUST00000226618	antisense		14	-1	84476383	1172
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000137053	protein_coding		4	1	134065912	339
ENSMUSG00000101535	processed_pseudogene	Gm29383	ENSMUST00000188284	processed_pseudogene		1	-1	128128889	480
ENSMUSG00000103481	TEC	1700016D08Rik	ENSMUST00000195807	TEC		16	-1	3909192	368
ENSMUSG00000103481	TEC	1700016D08Rik	ENSMUST00000193513	TEC		16	-1	3909192	336
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000133194	processed_transcript		11	1	85581042	594
ENSMUSG00000115529	antisense	9630013A20Rik	ENSMUST00000226890	antisense		14	-1	84476367	1126
ENSMUSG00000102009	processed_transcript	4933400F21Rik	ENSMUST00000187295	antisense		1	-1	89683894	2633
ENSMUSG00000104239	TEC	Gm37588	ENSMUST00000195024	TEC		1	1	128132157	2496
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000144276	protein_coding		11	1	85470752	604
ENSMUSG00000102009	processed_transcript	4933400F21Rik	ENSMUST00000187011	retained_intron		1	-1	89683888	383
ENSMUSG00000115304	lincRNA	4930434J06Rik	ENSMUST00000228500	lincRNA		14	1	71856702	622
ENSMUSG00000110660	processed_pseudogene	Gm5362	ENSMUST00000211968	processed_pseudogene		9	-1	3497463	3085
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000121391	protein_coding	principal2	4	1	134068452	4761
ENSMUSG00000104114	TEC	Gm37297	ENSMUST00000192974	TEC		1	1	89483438	2384
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000140215	processed_transcript		11	1	85492568	391
ENSMUSG00000115304	lincRNA	4930434J06Rik	ENSMUST00000226195	lincRNA		14	1	71856709	700
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000149504	processed_transcript		4	1	134078838	852
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000138423	protein_coding		11	1	85353185	414
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000149956	protein_coding		4	1	134078919	880
ENSMUSG00000115304	lincRNA	4930434J06Rik	ENSMUST00000227287	lincRNA		14	1	71856709	1548
ENSMUSG00000103181	lincRNA	A330069K06Rik	ENSMUST00000194077	lincRNA		3	1	80054892	917
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000183078	retained_intron		17	-1	46520665	3070
ENSMUSG00000115304	lincRNA	4930434J06Rik	ENSMUST00000228197	lincRNA		14	1	71913091	258
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000092821	protein_coding	alternative2	11	1	85353212	2769
ENSMUSG00000103929	antisense	Gm37892	ENSMUST00000192018	antisense		3	-1	80205598	437
ENSMUSG00000059439	protein_coding	Bcas3	ENSMUST00000074875	protein_coding	principal3	11	1	85353212	2814
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000142940	protein_coding		17	-1	56567015	1233
ENSMUSG00000105307	TEC	Gm43839	ENSMUST00000196183	TEC		3	1	80134132	2325
ENSMUSG00000081992	processed_pseudogene	Gm13408	ENSMUST00000119822	processed_pseudogene		2	1	34564999	798
ENSMUSG00000057637	protein_coding	Prdm2	ENSMUST00000105778	protein_coding	principal1	4	-1	143212705	7304
ENSMUSG00000103193	processed_pseudogene	Gm19066	ENSMUST00000193232	processed_pseudogene		3	-1	80089159	1078
ENSMUSG00000103154	unprocessed_pseudogene	Gm38295	ENSMUST00000191951	unprocessed_pseudogene		3	-1	80194630	151
ENSMUSG00000057637	protein_coding	Prdm2	ENSMUST00000154280	protein_coding		4	-1	143194735	574
ENSMUSG00000102379	lincRNA	Gm37971	ENSMUST00000193516	lincRNA		3	-1	80334595	3391
ENSMUSG00000057637	protein_coding	Prdm2	ENSMUST00000134791	protein_coding		4	-1	143212709	617
ENSMUSG00000035566	protein_coding	Pcdh17	ENSMUST00000071370	protein_coding	principal1	14	1	84443563	11451
ENSMUSG00000057637	protein_coding	Prdm2	ENSMUST00000156909	processed_transcript		4	-1	143212995	347
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000172287	protein_coding		1	1	57774162	823
ENSMUSG00000035566	protein_coding	Pcdh17	ENSMUST00000226362	retained_intron		14	1	84448507	1919
ENSMUSG00000086199	antisense	Bcas3os1	ENSMUST00000146806	antisense		11	-1	85719744	980
ENSMUSG00000095702	processed_pseudogene	Gm15005	ENSMUST00000117639	processed_pseudogene		X	-1	136568922	512
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000168905	retained_intron		1	1	57774249	655
ENSMUSG00000082421	processed_pseudogene	Gm15004	ENSMUST00000119192	processed_pseudogene		X	-1	136584493	630
ENSMUSG00000086199	antisense	Bcas3os1	ENSMUST00000151652	antisense		11	-1	85719744	3138
ENSMUSG00000085514	antisense	Bcas3os2	ENSMUST00000134305	antisense		11	-1	85775680	661
ENSMUSG00000002017	protein_coding	Fam98a	ENSMUST00000112507	protein_coding	principal1	17	-1	75551946	2817
ENSMUSG00000075102	protein_coding	Olfr1221	ENSMUST00000217635	protein_coding	principal1	2	-1	89117283	3753
ENSMUSG00000036196	protein_coding	Slc26a8	ENSMUST00000232805	protein_coding		17	-1	28644585	1142
ENSMUSG00000002017	protein_coding	Fam98a	ENSMUST00000234785	protein_coding		17	-1	75551862	2809
ENSMUSG00000030757	protein_coding	Zkscan2	ENSMUST00000042470	protein_coding	principal1	7	-1	123500449	7831
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000153392	retained_intron		4	1	134082312	662
ENSMUSG00000044021	protein_coding	Muc19	ENSMUST00000160242	processed_transcript		15	1	91838326	9104
ENSMUSG00000028845	protein_coding	Tekt2	ENSMUST00000102616	protein_coding	principal1	4	-1	126325688	1542
ENSMUSG00000030757	protein_coding	Zkscan2	ENSMUST00000206148	retained_intron		7	-1	123480929	3186
ENSMUSG00000016833	protein_coding	Mrps18c	ENSMUST00000016977	protein_coding	principal2	5	1	100798627	638
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000182315	retained_intron		17	-1	46546301	8451
ENSMUSG00000002017	protein_coding	Fam98a	ENSMUST00000140729	retained_intron		17	-1	75540572	663
ENSMUSG00000075102	protein_coding	Olfr1221	ENSMUST00000143255	protein_coding	principal1	2	-1	89117283	2800
ENSMUSG00000030757	protein_coding	Zkscan2	ENSMUST00000125356	protein_coding		7	-1	123484977	713
ENSMUSG00000028845	protein_coding	Tekt2	ENSMUST00000156139	retained_intron		4	-1	126325630	889
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000148924	retained_intron		2	-1	130840132	2108
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000140125	retained_intron		4	1	134082312	2714
ENSMUSG00000030757	protein_coding	Zkscan2	ENSMUST00000128217	protein_coding		7	-1	123500449	2218
ENSMUSG00000075102	protein_coding	Olfr1221	ENSMUST00000213404	protein_coding	principal1	2	-1	89117283	2778
ENSMUSG00000028845	protein_coding	Tekt2	ENSMUST00000131113	protein_coding		4	-1	126325643	559
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000144014	retained_intron		2	-1	130840111	2156
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000132872	retained_intron		4	1	134082315	625
ENSMUSG00000016833	protein_coding	Mrps18c	ENSMUST00000112898	protein_coding		5	1	100798737	460
ENSMUSG00000002017	protein_coding	Fam98a	ENSMUST00000235026	processed_transcript		17	-1	75551873	615
ENSMUSG00000028845	protein_coding	Tekt2	ENSMUST00000141990	protein_coding		4	-1	126325435	334
ENSMUSG00000014232	protein_coding	Cluap1	ENSMUST00000145150	protein_coding		16	1	3908801	638
ENSMUSG00000075102	protein_coding	Olfr1221	ENSMUST00000099795	protein_coding	principal1	2	-1	89112510	936
ENSMUSG00000002017	protein_coding	Fam98a	ENSMUST00000141969	retained_intron		17	-1	75551796	621
ENSMUSG00000044550	protein_coding	Tceal3	ENSMUST00000153780	processed_transcript		X	1	136590855	741
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000182530	retained_intron		17	-1	46525756	4151
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000149383	protein_coding		2	1	34406771	661
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000149080	retained_intron		4	1	134082350	606
ENSMUSG00000098160	processed_transcript	Gm26974	ENSMUST00000183263	lincRNA		7	-1	123968767	930
ENSMUSG00000016833	protein_coding	Mrps18c	ENSMUST00000140296	retained_intron		5	1	100798743	256
ENSMUSG00000028845	protein_coding	Tekt2	ENSMUST00000030658	protein_coding	principal1	4	-1	126325199	1492
ENSMUSG00000064115	protein_coding	Cadm2	ENSMUST00000114292	protein_coding	principal3	16	-1	67620908	9564
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000182668	retained_intron		17	-1	46522640	4109
ENSMUSG00000044021	protein_coding	Muc19	ENSMUST00000180042	protein_coding		15	1	91877779	2980
ENSMUSG00000098160	processed_transcript	Gm26974	ENSMUST00000182054	lincRNA		7	-1	123968381	875
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000137529	retained_intron		4	1	134082436	353
ENSMUSG00000016833	protein_coding	Mrps18c	ENSMUST00000198453	nonsense_mediated_decay		5	1	100798743	457
ENSMUSG00000087394	processed_transcript	Gm12945	ENSMUST00000140080	processed_transcript		4	1	126323599	674
ENSMUSG00000098160	processed_transcript	Gm26974	ENSMUST00000194314	retained_intron		7	-1	123967885	1486
ENSMUSG00000075101	protein_coding	Olfr1222	ENSMUST00000215816	protein_coding	principal1	2	-1	89133054	3796
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000146102	retained_intron		4	1	134090815	650
ENSMUSG00000012123	protein_coding	Crybg2	ENSMUST00000143295	processed_transcript		4	1	134091150	265
ENSMUSG00000064115	protein_coding	Cadm2	ENSMUST00000120594	protein_coding	alternative1	16	-1	67620823	3248
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000183016	retained_intron		17	-1	46520571	791
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000182799	retained_intron		17	-1	46525114	1673
ENSMUSG00000075101	protein_coding	Olfr1222	ENSMUST00000214027	protein_coding	principal1	2	-1	89133052	2393
ENSMUSG00000016833	protein_coding	Mrps18c	ENSMUST00000112901	protein_coding	alternative2	5	1	100798747	820
ENSMUSG00000064115	protein_coding	Cadm2	ENSMUST00000120898	protein_coding		16	-1	67620908	2768
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000119422	protein_coding		2	-1	130839687	3815
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000182451	retained_intron		17	-1	46537816	700
ENSMUSG00000016833	protein_coding	Mrps18c	ENSMUST00000143477	retained_intron		5	1	100803910	258
ENSMUSG00000075219	protein_coding	Olfr994	ENSMUST00000215758	processed_transcript		2	-1	85436451	1658
ENSMUSG00000064115	protein_coding	Cadm2	ENSMUST00000128168	protein_coding		16	-1	66953334	1308
ENSMUSG00000052469	protein_coding	Tcp10c	ENSMUST00000233944	protein_coding		17	1	13354572	663
ENSMUSG00000075101	protein_coding	Olfr1222	ENSMUST00000099794	protein_coding	principal1	2	-1	89125729	936
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000142128	processed_transcript		2	-1	130814292	573
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000183163	retained_intron		17	-1	46538076	1017
ENSMUSG00000104761	TEC	Gm43511	ENSMUST00000197084	TEC		5	1	100798749	2297
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000145851	protein_coding		2	-1	130770773	740
ENSMUSG00000075219	protein_coding	Olfr994	ENSMUST00000214679	protein_coding	principal1	2	-1	85436326	1648
ENSMUSG00000115033	processed_pseudogene	Gm49206	ENSMUST00000227603	processed_pseudogene		15	-1	7576242	250
ENSMUSG00000040327	protein_coding	Cul9	ENSMUST00000066026	protein_coding	alternative2	17	-1	46546388	7818
ENSMUSG00000075219	protein_coding	Olfr994	ENSMUST00000217218	protein_coding	principal1	2	-1	85436332	1460
ENSMUSG00000103142	TEC	Gm37743	ENSMUST00000194645	TEC		15	-1	7670340	376
ENSMUSG00000064115	protein_coding	Cadm2	ENSMUST00000123266	protein_coding		16	-1	67620493	422
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000151673	retained_intron		2	-1	130739500	442
ENSMUSG00000075219	protein_coding	Olfr994	ENSMUST00000099925	protein_coding	principal1	2	-1	85430827	945
ENSMUSG00000078591	protein_coding	Hs3st4	ENSMUST00000106437	protein_coding	principal1	7	1	123982869	3189
ENSMUSG00000115497	lincRNA	Gm49207	ENSMUST00000228223	lincRNA		15	1	7760714	279
ENSMUSG00000064115	protein_coding	Cadm2	ENSMUST00000141282	processed_transcript		16	-1	66925584	457
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000133132	processed_transcript		2	-1	130757451	643
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000123049	processed_transcript		2	-1	130810894	698
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000144255	nonsense_mediated_decay		17	-1	56584512	2523
ENSMUSG00000044550	protein_coding	Tceal3	ENSMUST00000060904	protein_coding	principal1	X	1	136666375	1116
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000071585	protein_coding	principal3	2	1	181715016	2999
ENSMUSG00000036790	protein_coding	Slitrk2	ENSMUST00000036043	protein_coding	principal1	X	1	66653007	2992
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000144717	processed_transcript		2	-1	130778333	681
ENSMUSG00000045178	antisense	4933411O13Rik	ENSMUST00000146849	antisense		16	1	66892503	607
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000238942	protein_coding	alternative2	2	1	181715016	2999
ENSMUSG00000098129	antisense	Gm27040	ENSMUST00000181984	antisense		7	-1	123983454	504
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000138990	protein_coding		2	-1	130840134	545
ENSMUSG00000044550	protein_coding	Tceal3	ENSMUST00000138047	protein_coding		X	1	136590842	447
ENSMUSG00000045178	antisense	4933411O13Rik	ENSMUST00000140815	antisense		16	1	66892509	370
ENSMUSG00000045178	antisense	4933411O13Rik	ENSMUST00000050665	antisense		16	1	66892511	1464
ENSMUSG00000085899	sense_intronic	Gm15338	ENSMUST00000151884	sense_intronic		7	1	124186718	552
ENSMUSG00000082823	processed_pseudogene	Gm15828	ENSMUST00000119911	processed_pseudogene		16	-1	67593226	522
ENSMUSG00000014232	protein_coding	Cluap1	ENSMUST00000040881	protein_coding	principal1	16	1	3908825	1779
ENSMUSG00000116904	processed_pseudogene	Gm49640	ENSMUST00000232322	processed_pseudogene		16	-1	67238350	223
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000146975	protein_coding		2	-1	130906406	472
ENSMUSG00000044550	protein_coding	Tceal3	ENSMUST00000125067	processed_transcript		X	1	136590848	1871
ENSMUSG00000027309	protein_coding	4930402H24Rik	ENSMUST00000120316	protein_coding		2	-1	130840137	463
ENSMUSG00000092599	antisense	1700010K23Rik	ENSMUST00000174502	antisense		16	1	66657118	376
ENSMUSG00000085892	lincRNA	Gm15339	ENSMUST00000153577	lincRNA		7	-1	124494301	506
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000183693	nonsense_mediated_decay		2	1	181715042	3102
ENSMUSG00000036790	protein_coding	Slitrk2	ENSMUST00000166241	protein_coding	principal1	X	1	66649318	7769
ENSMUSG00000080989	processed_pseudogene	Gm14048	ENSMUST00000121864	processed_pseudogene		2	1	130880866	1268
ENSMUSG00000044550	protein_coding	Tceal3	ENSMUST00000145648	protein_coding		X	1	136590844	412
ENSMUSG00000086254	lincRNA	3100003L05Rik	ENSMUST00000130240	lincRNA		7	-1	124708935	664
ENSMUSG00000074738	protein_coding	Fndc10	ENSMUST00000099265	protein_coding	principal1	4	1	155694342	2140
ENSMUSG00000084074	processed_pseudogene	Gm8310	ENSMUST00000117526	processed_pseudogene		X	1	66763382	1193
ENSMUSG00000014232	protein_coding	Cluap1	ENSMUST00000137745	retained_intron		16	1	3909039	515
ENSMUSG00000055024	protein_coding	Ep300	ENSMUST00000068387	protein_coding	principal1	15	1	81585397	9566
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000148334	protein_coding		2	1	181715046	640
ENSMUSG00000041911	protein_coding	Dlx1	ENSMUST00000037119	protein_coding	principal1	2	1	71528113	4111
ENSMUSG00000085566	processed_transcript	A730017L22Rik	ENSMUST00000128176	processed_transcript		2	-1	130906356	3055
ENSMUSG00000081603	processed_pseudogene	Gm14681	ENSMUST00000118047	processed_pseudogene		X	-1	66778852	411
ENSMUSG00000108623	lincRNA	Gm45092	ENSMUST00000205944	lincRNA		7	1	124907609	545
ENSMUSG00000115241	lincRNA	Gm41322	ENSMUST00000227624	lincRNA		15	1	52445122	508
ENSMUSG00000085566	processed_transcript	A730017L22Rik	ENSMUST00000133766	processed_transcript		2	-1	130906379	547
ENSMUSG00000025525	protein_coding	Apool	ENSMUST00000026599	protein_coding	principal3	X	1	112311334	1359
ENSMUSG00000044021	protein_coding	Muc19	ENSMUST00000088547	protein_coding		15	1	91908911	2623
ENSMUSG00000108407	TEC	Gm45093	ENSMUST00000206859	TEC		7	-1	125069491	2463
ENSMUSG00000044550	protein_coding	Tceal3	ENSMUST00000113100	protein_coding	principal1	X	1	136666403	1148
ENSMUSG00000052469	protein_coding	Tcp10c	ENSMUST00000233884	nonsense_mediated_decay		17	1	13354572	2254
ENSMUSG00000080795	processed_pseudogene	Gm6783	ENSMUST00000120916	processed_pseudogene		X	-1	66970659	1437
ENSMUSG00000041911	protein_coding	Dlx1	ENSMUST00000126400	protein_coding		2	1	71528683	787
ENSMUSG00000085566	processed_transcript	A730017L22Rik	ENSMUST00000135110	processed_transcript		2	-1	130906396	2884
ENSMUSG00000014232	protein_coding	Cluap1	ENSMUST00000139294	nonsense_mediated_decay		16	1	3909076	1087
ENSMUSG00000057262	processed_pseudogene	Rpl15-ps6	ENSMUST00000081993	processed_pseudogene		15	-1	52478228	612
ENSMUSG00000044550	protein_coding	Tceal3	ENSMUST00000128040	protein_coding		X	1	136666611	676
ENSMUSG00000081442	processed_pseudogene	Gm14682	ENSMUST00000117977	processed_pseudogene		X	1	66972654	524
ENSMUSG00000055024	protein_coding	Ep300	ENSMUST00000189338	retained_intron		15	1	81586220	3236
ENSMUSG00000041911	protein_coding	Dlx1	ENSMUST00000152711	protein_coding		2	1	71529101	702
ENSMUSG00000089662	transcribed_processed_pseudogene	Gm14057	ENSMUST00000120631	transcribed_processed_pseudogene		2	-1	130803982	482
ENSMUSG00000108799	processed_pseudogene	Glud-ps	ENSMUST00000206310	processed_pseudogene		7	1	125075351	657
ENSMUSG00000025525	protein_coding	Apool	ENSMUST00000154378	retained_intron		X	1	112311348	2441
ENSMUSG00000055024	protein_coding	Ep300	ENSMUST00000185967	protein_coding		15	1	81613315	559
ENSMUSG00000014232	protein_coding	Cluap1	ENSMUST00000124849	protein_coding		16	1	3909106	803
ENSMUSG00000041911	protein_coding	Dlx1	ENSMUST00000145444	nonsense_mediated_decay		2	1	71529853	813
ENSMUSG00000115743	processed_pseudogene	Gm7004	ENSMUST00000227353	processed_pseudogene		14	-1	84759083	1458
ENSMUSG00000025525	protein_coding	Apool	ENSMUST00000113415	protein_coding	alternative2	X	1	112311366	783
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000108763	protein_coding	alternative2	2	1	181715067	2971
ENSMUSG00000081809	processed_pseudogene	Gm15539	ENSMUST00000118452	processed_pseudogene		16	1	3927606	566
ENSMUSG00000041911	protein_coding	Dlx1	ENSMUST00000145088	retained_intron		2	1	71529947	3385
ENSMUSG00000038622	protein_coding	Med30	ENSMUST00000228053	processed_transcript		15	1	52712408	423
ENSMUSG00000102028	unprocessed_pseudogene	Gm3142	ENSMUST00000190107	unprocessed_pseudogene		15	-1	75377269	414
ENSMUSG00000073844	processed_pseudogene	Gm21957	ENSMUST00000073056	processed_pseudogene		7	-1	125219886	438
ENSMUSG00000044021	protein_coding	Muc19	ENSMUST00000178108	protein_coding	principal1	15	1	91870471	2888
ENSMUSG00000055024	protein_coding	Ep300	ENSMUST00000190035	retained_intron		15	1	81613333	594
ENSMUSG00000115239	processed_pseudogene	Gm9264	ENSMUST00000227214	processed_pseudogene		14	1	85479026	508
ENSMUSG00000115061	processed_pseudogene	Gm49290	ENSMUST00000228357	processed_pseudogene		14	-1	72195696	380
ENSMUSG00000052469	protein_coding	Tcp10c	ENSMUST00000097403	protein_coding	principal1	17	1	13354572	2528
ENSMUSG00000041911	protein_coding	Dlx1	ENSMUST00000172629	retained_intron		2	1	71530780	803
ENSMUSG00000116157	unprocessed_pseudogene	Cyp2d67-ps	ENSMUST00000230825	unprocessed_pseudogene		15	1	81966988	415
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000184795	nonsense_mediated_decay		2	1	181715083	2938
ENSMUSG00000055024	protein_coding	Ep300	ENSMUST00000206936	protein_coding		15	1	81621062	401
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000187550	protein_coding		15	-1	79141187	1168
ENSMUSG00000115653	processed_pseudogene	Gm49059	ENSMUST00000228318	processed_pseudogene		14	1	85655204	694
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000126835	processed_transcript		2	1	181715094	2297
ENSMUSG00000009535	protein_coding	Rnmt	ENSMUST00000009679	protein_coding	principal1	18	1	68300355	5008
ENSMUSG00000061848	processed_pseudogene	Gm5805	ENSMUST00000072779	processed_pseudogene		15	1	81972390	456
ENSMUSG00000055024	protein_coding	Ep300	ENSMUST00000206833	protein_coding		15	1	81627425	439
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000151241	processed_transcript		2	1	181715101	647
ENSMUSG00000038622	protein_coding	Med30	ENSMUST00000037115	protein_coding	principal1	15	1	52712442	1007
ENSMUSG00000064284	protein_coding	Cdpf1	ENSMUST00000071876	protein_coding	principal1	15	-1	85811696	997
ENSMUSG00000028138	protein_coding	Adh5	ENSMUST00000005964	protein_coding	principal1	3	1	138443093	1604
ENSMUSG00000009535	protein_coding	Rnmt	ENSMUST00000131075	protein_coding		18	1	68300392	757
ENSMUSG00000054493	antisense	Gm9947	ENSMUST00000187401	antisense		1	1	14752937	687
ENSMUSG00000109446	protein_coding	Gm9195	ENSMUST00000208955	protein_coding	principal1	14	-1	72491838	8870
ENSMUSG00000115217	lincRNA	Gm32729	ENSMUST00000227116	lincRNA		14	1	86172923	606
ENSMUSG00000044378	protein_coding	Slc15a5	ENSMUST00000111873	protein_coding		6	-1	138043411	1512
ENSMUSG00000115836	processed_pseudogene	Gm49060	ENSMUST00000227856	processed_pseudogene		14	1	86204742	631
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000108768	protein_coding	principal3	2	1	181715348	2914
ENSMUSG00000028138	protein_coding	Adh5	ENSMUST00000162024	retained_intron		3	1	138443111	742
ENSMUSG00000054493	antisense	Gm9947	ENSMUST00000067599	antisense		1	1	14755454	2920
ENSMUSG00000009535	protein_coding	Rnmt	ENSMUST00000151833	retained_intron		18	1	68300398	2474
ENSMUSG00000028138	protein_coding	Adh5	ENSMUST00000197643	retained_intron		3	1	138443112	3725
ENSMUSG00000055024	protein_coding	Ep300	ENSMUST00000205816	retained_intron		15	1	81633979	697
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000190959	protein_coding	principal1	15	-1	79141239	1403
ENSMUSG00000053168	transcribed_unprocessed_pseudogene	9030619P08Rik	ENSMUST00000096397	processed_transcript		15	-1	75431829	857
ENSMUSG00000053168	transcribed_unprocessed_pseudogene	9030619P08Rik	ENSMUST00000227495	processed_transcript		15	-1	75431724	525
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000108767	protein_coding	principal3	2	1	181715593	1248
ENSMUSG00000086881	antisense	Gm13594	ENSMUST00000137582	antisense		2	1	65238756	476
ENSMUSG00000028138	protein_coding	Adh5	ENSMUST00000160625	retained_intron		3	1	138443170	515
ENSMUSG00000009535	protein_coding	Rnmt	ENSMUST00000025427	protein_coding		18	1	68300400	1852
ENSMUSG00000053168	transcribed_unprocessed_pseudogene	9030619P08Rik	ENSMUST00000190141	transcribed_unprocessed_pseudogene		15	-1	75431436	435
ENSMUSG00000064284	protein_coding	Cdpf1	ENSMUST00000134631	protein_coding	principal1	15	-1	85811654	786
ENSMUSG00000055024	protein_coding	Ep300	ENSMUST00000187776	retained_intron		15	1	81636148	2493
ENSMUSG00000061633	protein_coding	1700029P11Rik	ENSMUST00000074608	protein_coding	principal1	15	1	81980540	1024
ENSMUSG00000025930	protein_coding	Msc	ENSMUST00000027062	protein_coding	principal1	1	-1	14755990	1741
ENSMUSG00000028138	protein_coding	Adh5	ENSMUST00000160201	nonsense_mediated_decay		3	1	138443170	733
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000108766	protein_coding		2	1	181715702	1241
ENSMUSG00000055024	protein_coding	Ep300	ENSMUST00000206431	retained_intron		15	1	81644850	850
ENSMUSG00000044378	protein_coding	Slc15a5	ENSMUST00000050132	retained_intron		6	-1	138073196	2242
ENSMUSG00000009535	protein_coding	Rnmt	ENSMUST00000139111	protein_coding		18	1	68300422	965
ENSMUSG00000028138	protein_coding	Adh5	ENSMUST00000198126	nonsense_mediated_decay		3	1	138443181	956
ENSMUSG00000027584	protein_coding	Oprl1	ENSMUST00000184127	nonsense_mediated_decay		2	1	181715703	1257
ENSMUSG00000025930	protein_coding	Msc	ENSMUST00000190719	protein_coding		1	-1	14755353	741
ENSMUSG00000064284	protein_coding	Cdpf1	ENSMUST00000144067	protein_coding	principal1	15	-1	85811644	761
ENSMUSG00000009535	protein_coding	Rnmt	ENSMUST00000129849	protein_coding		18	1	68304997	537
ENSMUSG00000096221	antisense	1500002C15Rik	ENSMUST00000178987	antisense		4	-1	155734727	2183
ENSMUSG00000080874	processed_pseudogene	Gm15010	ENSMUST00000117153	processed_pseudogene		X	-1	136701652	407
ENSMUSG00000028138	protein_coding	Adh5	ENSMUST00000159392	retained_intron		3	1	138454405	561
ENSMUSG00000025930	protein_coding	Msc	ENSMUST00000188982	retained_intron		1	-1	14754665	731
ENSMUSG00000096221	antisense	1500002C15Rik	ENSMUST00000197451	antisense		4	-1	155734627	2080
ENSMUSG00000064284	protein_coding	Cdpf1	ENSMUST00000125947	protein_coding	principal1	15	-1	85811090	706
ENSMUSG00000009535	protein_coding	Rnmt	ENSMUST00000139554	retained_intron		18	1	68317491	748
ENSMUSG00000025930	protein_coding	Msc	ENSMUST00000190471	retained_intron		1	-1	14755992	1226
ENSMUSG00000009535	protein_coding	Rnmt	ENSMUST00000148937	processed_transcript		18	1	68318997	3791
ENSMUSG00000047295	protein_coding	Smgc	ENSMUST00000109277	protein_coding	alternative2	15	1	91838265	855
ENSMUSG00000044378	protein_coding	Slc15a5	ENSMUST00000171804	protein_coding	principal1	6	-1	138079916	2461
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000124443	protein_coding		2	1	34406862	1630
ENSMUSG00000064284	protein_coding	Cdpf1	ENSMUST00000150995	protein_coding	principal1	15	-1	85811697	566
ENSMUSG00000044378	protein_coding	Slc15a5	ENSMUST00000150278	protein_coding		6	-1	138036903	528
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000141253	protein_coding		2	1	34406869	625
ENSMUSG00000103486	TEC	Gm10657	ENSMUST00000193528	TEC		9	1	58554799	1031
ENSMUSG00000064284	protein_coding	Cdpf1	ENSMUST00000154814	protein_coding		15	-1	85811659	421
ENSMUSG00000044378	protein_coding	Slc15a5	ENSMUST00000141280	protein_coding		6	-1	138043481	399
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000156967	processed_transcript		2	1	34406872	606
ENSMUSG00000036196	protein_coding	Slc26a8	ENSMUST00000114764	protein_coding	principal1	17	-1	28689987	3670
ENSMUSG00000044378	protein_coding	Slc15a5	ENSMUST00000154461	retained_intron		6	-1	138055847	452
ENSMUSG00000047295	protein_coding	Smgc	ENSMUST00000123935	processed_transcript		15	1	91838328	1517
ENSMUSG00000036196	protein_coding	Slc26a8	ENSMUST00000233249	protein_coding		17	-1	28689987	3341
ENSMUSG00000048349	protein_coding	Pou4f1	ENSMUST00000053016	protein_coding	principal1	14	-1	104467999	4445
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000075510	protein_coding	principal1	17	-1	56584585	3277
ENSMUSG00000036196	protein_coding	Slc26a8	ENSMUST00000145224	protein_coding		17	-1	28689987	2249
ENSMUSG00000036196	protein_coding	Slc26a8	ENSMUST00000233398	protein_coding		17	-1	28689795	1717
ENSMUSG00000075218	protein_coding	Olfr995	ENSMUST00000216933	protein_coding	principal1	2	-1	85443639	1706
ENSMUSG00000028494	protein_coding	Plin2	ENSMUST00000154999	processed_transcript		4	-1	86658683	588
ENSMUSG00000048349	protein_coding	Pou4f1	ENSMUST00000139505	processed_transcript		14	-1	104465365	799
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000156640	processed_transcript		17	-1	56572498	552
ENSMUSG00000036196	protein_coding	Slc26a8	ENSMUST00000233689	retained_intron		17	-1	28672768	765
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000113124	protein_coding	alternative1	2	1	34406878	1758
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000154991	protein_coding		17	-1	56567018	870
ENSMUSG00000075218	protein_coding	Olfr995	ENSMUST00000099924	protein_coding	principal1	2	-1	85439237	1113
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000113123	protein_coding		2	1	34406886	1530
ENSMUSG00000036196	protein_coding	Slc26a8	ENSMUST00000233903	nonsense_mediated_decay		17	-1	28689789	640
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000131056	protein_coding		17	-1	56571438	886
ENSMUSG00000036196	protein_coding	Slc26a8	ENSMUST00000233213	processed_transcript		17	-1	28690233	734
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000127947	retained_intron		17	-1	56569434	632
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000147337	protein_coding	principal2	2	1	34407183	3111
ENSMUSG00000029038	protein_coding	Ssu72	ENSMUST00000030905	protein_coding	principal1	4	1	155704800	1472
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000138933	processed_transcript		2	1	34438494	735
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000169604	protein_coding	principal1	15	-1	79141253	1249
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000137021	nonsense_mediated_decay		2	1	34444347	376
ENSMUSG00000038879	protein_coding	Nipal2	ENSMUST00000040791	protein_coding	principal1	15	-1	34679212	4331
ENSMUSG00000029038	protein_coding	Ssu72	ENSMUST00000140322	retained_intron		4	1	155705124	1555
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000190509	protein_coding		15	-1	79141230	871
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000124457	retained_intron		17	-1	56575097	684
ENSMUSG00000086541	processed_transcript	Has2os	ENSMUST00000125401	antisense		15	1	56689944	485
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000129633	processed_transcript		2	1	34619582	691
ENSMUSG00000035914	protein_coding	Cd276	ENSMUST00000165365	protein_coding	principal1	9	-1	58555437	3603
ENSMUSG00000029038	protein_coding	Ssu72	ENSMUST00000105595	protein_coding		4	1	155705135	874
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000133604	nonsense_mediated_decay		17	-1	56584524	1804
ENSMUSG00000086541	processed_transcript	Has2os	ENSMUST00000166290	antisense		15	1	56693552	1012
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000186559	processed_transcript		15	-1	79136713	851
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000172068	protein_coding		1	1	57774301	1021
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000134741	retained_intron		17	-1	56575519	2107
ENSMUSG00000086541	processed_transcript	Has2os	ENSMUST00000163314	antisense		15	1	56693954	633
ENSMUSG00000035914	protein_coding	Cd276	ENSMUST00000216629	protein_coding		9	-1	58540714	346
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000134497	retained_intron		17	-1	56571677	572
ENSMUSG00000038879	protein_coding	Nipal2	ENSMUST00000228679	nonsense_mediated_decay		15	-1	34582771	483
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000190730	protein_coding		15	-1	79141234	691
ENSMUSG00000022034	protein_coding	Esco2	ENSMUST00000022613	protein_coding	principal1	14	-1	65833994	2913
ENSMUSG00000035914	protein_coding	Cd276	ENSMUST00000213722	protein_coding		9	-1	58537471	434
ENSMUSG00000032315	protein_coding	Cyp1a1	ENSMUST00000216433	protein_coding	principal1	9	1	57687928	2697
ENSMUSG00000086541	processed_transcript	Has2os	ENSMUST00000165880	lincRNA		15	1	56765460	638
ENSMUSG00000038696	protein_coding	Mapkap1	ENSMUST00000113126	protein_coding	principal2	2	1	34432025	3018
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000155983	nonsense_mediated_decay		17	-1	56584562	1090
ENSMUSG00000022034	protein_coding	Esco2	ENSMUST00000136920	retained_intron		14	-1	65827207	640
ENSMUSG00000035914	protein_coding	Cd276	ENSMUST00000039788	protein_coding	principal1	9	-1	58540941	3186
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000188562	protein_coding		15	-1	79141205	631
ENSMUSG00000083233	processed_pseudogene	Gm13406	ENSMUST00000121991	processed_pseudogene		2	-1	34436582	256
ENSMUSG00000047295	protein_coding	Smgc	ENSMUST00000109276	protein_coding	alternative2	15	1	91838328	1248
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000189761	nonsense_mediated_decay		15	-1	79141182	686
ENSMUSG00000022034	protein_coding	Esco2	ENSMUST00000131729	retained_intron		14	-1	65828945	805
ENSMUSG00000083503	processed_pseudogene	Gm13407	ENSMUST00000118256	processed_pseudogene		2	-1	34413347	360
ENSMUSG00000022034	protein_coding	Esco2	ENSMUST00000224162	retained_intron		14	-1	65831819	3996
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000186459	nonsense_mediated_decay		15	-1	79141203	636
ENSMUSG00000022034	protein_coding	Esco2	ENSMUST00000225853	protein_coding		14	-1	65833908	326
ENSMUSG00000027890	protein_coding	Gstm4	ENSMUST00000029489	protein_coding	principal1	3	-1	108044894	1707
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000191006	protein_coding		15	-1	79139275	342
ENSMUSG00000038879	protein_coding	Nipal2	ENSMUST00000227222	retained_intron		15	-1	34678704	692
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000186053	protein_coding		15	-1	79141253	535
ENSMUSG00000032315	protein_coding	Cyp1a1	ENSMUST00000034865	protein_coding	principal1	9	1	57697613	2621
ENSMUSG00000038879	protein_coding	Nipal2	ENSMUST00000228073	nonsense_mediated_decay		15	-1	34678800	535
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000140037	retained_intron		17	-1	56583046	970
ENSMUSG00000041921	protein_coding	Metap1d	ENSMUST00000037210	protein_coding	principal1	2	1	71453276	1321
ENSMUSG00000033029	protein_coding	1700088E04Rik	ENSMUST00000190400	protein_coding		15	-1	79140978	457
ENSMUSG00000038879	protein_coding	Nipal2	ENSMUST00000227336	processed_transcript		15	-1	34678734	3243
ENSMUSG00000108975	unitary_pseudogene	Mlnr-ps	ENSMUST00000208959	unitary_pseudogene		14	-1	72532649	969
ENSMUSG00000027890	protein_coding	Gstm4	ENSMUST00000106670	protein_coding		3	-1	108044866	777
ENSMUSG00000038879	protein_coding	Nipal2	ENSMUST00000227126	retained_intron		15	-1	34678743	1417
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000146958	retained_intron		17	-1	56584301	842
ENSMUSG00000054517	protein_coding	Trim65	ENSMUST00000106440	protein_coding		11	-1	116131124	4040
ENSMUSG00000042625	protein_coding	Safb2	ENSMUST00000146070	retained_intron		17	-1	56584511	439
ENSMUSG00000033039	protein_coding	Micall1	ENSMUST00000229113	processed_transcript		15	1	79108898	468
ENSMUSG00000115526	antisense	4930413F20Rik	ENSMUST00000228853	antisense		15	1	34675073	1096
ENSMUSG00000022367	protein_coding	Has2	ENSMUST00000050544	protein_coding	principal1	15	-1	56694539	4237
ENSMUSG00000027890	protein_coding	Gstm4	ENSMUST00000178808	protein_coding		3	-1	108044859	1462
ENSMUSG00000081598	processed_pseudogene	Gm8312	ENSMUST00000119380	processed_pseudogene		X	-1	67170230	618
ENSMUSG00000087123	processed_pseudogene	Gm6706	ENSMUST00000145087	processed_pseudogene		3	-1	80399666	318
ENSMUSG00000104236	TEC	4930533L02Rik	ENSMUST00000194425	TEC		7	1	125318359	1160
ENSMUSG00000054517	protein_coding	Trim65	ENSMUST00000067632	protein_coding	principal1	11	-1	116131126	3048
ENSMUSG00000022120	protein_coding	Rnf219	ENSMUST00000022716	protein_coding	principal2	14	-1	104522632	3420
ENSMUSG00000037710	protein_coding	Cisd1	ENSMUST00000045887	protein_coding	principal1	10	-1	71344954	1084
ENSMUSG00000086185	lincRNA	1700036O09Rik	ENSMUST00000136834	lincRNA		X	1	67458196	349
ENSMUSG00000083010	processed_pseudogene	Gm14687	ENSMUST00000120206	processed_pseudogene		X	1	67660090	363
ENSMUSG00000044522	lincRNA	A730020M07Rik	ENSMUST00000196621	lincRNA		3	-1	121643482	2370
ENSMUSG00000054517	protein_coding	Trim65	ENSMUST00000154061	processed_transcript		11	-1	116131128	3132
ENSMUSG00000022120	protein_coding	Rnf219	ENSMUST00000227640	protein_coding	alternative2	14	-1	104522645	1632
ENSMUSG00000045928	lincRNA	4933440M02Rik	ENSMUST00000205794	lincRNA		7	-1	125338272	1601
ENSMUSG00000025527	protein_coding	Satl1	ENSMUST00000124335	protein_coding		X	-1	112405822	1457
ENSMUSG00000022120	protein_coding	Rnf219	ENSMUST00000228448	protein_coding	alternative2	14	-1	104522633	1056
ENSMUSG00000045928	lincRNA	4933440M02Rik	ENSMUST00000061823	lincRNA		7	-1	125349772	3801
ENSMUSG00000044522	lincRNA	A730020M07Rik	ENSMUST00000050571	lincRNA		3	-1	121643485	990
ENSMUSG00000044522	lincRNA	A730020M07Rik	ENSMUST00000198402	lincRNA		3	-1	121643367	866
ENSMUSG00000045928	lincRNA	4933440M02Rik	ENSMUST00000206609	lincRNA		7	-1	125349788	1747
ENSMUSG00000022120	protein_coding	Rnf219	ENSMUST00000228210	nonsense_mediated_decay		14	-1	104522622	410
ENSMUSG00000079578	protein_coding	Gm1140	ENSMUST00000114675	protein_coding	principal1	X	-1	67693562	782
ENSMUSG00000025527	protein_coding	Satl1	ENSMUST00000026601	protein_coding	principal1	X	-1	112406779	2412
ENSMUSG00000115384	processed_pseudogene	Gm49205	ENSMUST00000226423	processed_pseudogene		14	1	104481491	793
ENSMUSG00000041624	protein_coding	Gucy1a2	ENSMUST00000115733	protein_coding	principal1	9	1	3532778	2243
ENSMUSG00000090457	lincRNA	4930571K23Rik	ENSMUST00000206013	lincRNA		7	1	125368956	2052
ENSMUSG00000090457	lincRNA	4930571K23Rik	ENSMUST00000166958	lincRNA		7	1	125368861	2153
ENSMUSG00000082786	processed_pseudogene	Gm14489	ENSMUST00000120868	processed_pseudogene		2	-1	181724942	901
ENSMUSG00000083520	processed_pseudogene	Gm6418	ENSMUST00000118325	processed_pseudogene		X	-1	112462903	3577
ENSMUSG00000041921	protein_coding	Metap1d	ENSMUST00000123858	processed_transcript		2	1	71453333	1898
ENSMUSG00000020773	protein_coding	Trim47	ENSMUST00000141531	processed_transcript		11	-1	116108119	1503
ENSMUSG00000083818	processed_pseudogene	Gm14908	ENSMUST00000120930	processed_pseudogene		X	1	112464861	1286
ENSMUSG00000108814	lincRNA	Gm30717	ENSMUST00000206549	lincRNA		7	-1	125418114	494
ENSMUSG00000041624	protein_coding	Gucy1a2	ENSMUST00000213060	retained_intron		9	1	3532888	2897
ENSMUSG00000041624	protein_coding	Gucy1a2	ENSMUST00000212705	retained_intron		9	1	3579659	3233
ENSMUSG00000021754	protein_coding	Map3k1	ENSMUST00000109267	protein_coding	principal1	13	-1	111808993	6978
ENSMUSG00000115432	lincRNA	D130009I18Rik	ENSMUST00000227935	lincRNA		14	1	104612791	3717
ENSMUSG00000021754	protein_coding	Map3k1	ENSMUST00000175936	retained_intron		13	-1	111751373	544
ENSMUSG00000079577	protein_coding	Gm14692	ENSMUST00000114672	protein_coding	principal1	X	1	67695698	782
ENSMUSG00000021754	protein_coding	Map3k1	ENSMUST00000130594	retained_intron		13	-1	111754704	396
ENSMUSG00000115432	lincRNA	D130009I18Rik	ENSMUST00000228435	lincRNA		14	1	104639124	2203
ENSMUSG00000115432	lincRNA	D130009I18Rik	ENSMUST00000228477	lincRNA		14	1	104639124	2116
ENSMUSG00000021754	protein_coding	Map3k1	ENSMUST00000133364	processed_transcript		13	-1	111768553	443
ENSMUSG00000115432	lincRNA	D130009I18Rik	ENSMUST00000228036	lincRNA		14	1	104639144	2663
ENSMUSG00000115195	processed_pseudogene	Gm5671	ENSMUST00000227910	processed_pseudogene		14	1	105043450	905
ENSMUSG00000021754	protein_coding	Map3k1	ENSMUST00000145055	protein_coding		13	-1	111808315	867
ENSMUSG00000116265	unprocessed_pseudogene	Cyp2d32-ps	ENSMUST00000231008	unprocessed_pseudogene		15	1	82462621	963
ENSMUSG00000082621	processed_pseudogene	Rpl7a-ps13	ENSMUST00000121692	processed_pseudogene		X	1	67726244	563
ENSMUSG00000115931	unprocessed_pseudogene	Gm27825	ENSMUST00000230026	unprocessed_pseudogene		15	1	82504627	736
ENSMUSG00000041921	protein_coding	Metap1d	ENSMUST00000139045	processed_transcript		2	1	71453351	2770
ENSMUSG00000047347	processed_pseudogene	Tdg-ps	ENSMUST00000051363	processed_pseudogene		15	1	82516311	2968
ENSMUSG00000067194	protein_coding	Eif1ax	ENSMUST00000087143	protein_coding	principal1	X	1	159372178	5172
ENSMUSG00000116490	processed_pseudogene	Gm46525	ENSMUST00000229863	processed_pseudogene		15	-1	82520227	315
ENSMUSG00000041921	protein_coding	Metap1d	ENSMUST00000124875	processed_transcript		2	1	71453363	837
ENSMUSG00000116104	processed_pseudogene	Gm46524	ENSMUST00000229498	processed_pseudogene		15	1	82538289	314
ENSMUSG00000116735	TEC	Gm49555	ENSMUST00000231935	TEC		16	1	81290162	2795
ENSMUSG00000067194	protein_coding	Eif1ax	ENSMUST00000133252	retained_intron		X	1	159372178	416
ENSMUSG00000116888	TEC	7120432I05Rik	ENSMUST00000232478	TEC		16	1	81262318	1276
ENSMUSG00000025288	protein_coding	4933436I01Rik	ENSMUST00000026325	protein_coding	principal1	X	-1	67921450	1426
ENSMUSG00000041921	protein_coding	Metap1d	ENSMUST00000138873	processed_transcript		2	1	71510258	1614
ENSMUSG00000083437	processed_pseudogene	Gm15187	ENSMUST00000122329	processed_pseudogene		X	-1	159410510	264
ENSMUSG00000116219	unprocessed_pseudogene	Gm28023	ENSMUST00000230537	unprocessed_pseudogene		15	-1	82548652	736
ENSMUSG00000028494	protein_coding	Plin2	ENSMUST00000000466	protein_coding	principal1	4	-1	86670060	1888
ENSMUSG00000022514	protein_coding	Il1rap	ENSMUST00000096129	protein_coding	alternative1	16	1	26581704	4438
ENSMUSG00000041921	protein_coding	Metap1d	ENSMUST00000148164	processed_transcript		2	1	71515412	682
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000053251	protein_coding	alternative1	8	-1	33929863	2466
ENSMUSG00000084946	antisense	Dlx1as	ENSMUST00000140271	antisense		2	-1	71527919	700
ENSMUSG00000083709	processed_pseudogene	Gm14688	ENSMUST00000119169	processed_pseudogene		X	-1	68007287	303
ENSMUSG00000028494	protein_coding	Plin2	ENSMUST00000138605	processed_transcript		4	-1	86658644	635
ENSMUSG00000028494	protein_coding	Plin2	ENSMUST00000134437	processed_transcript		4	-1	86659148	817
ENSMUSG00000084946	antisense	Dlx1as	ENSMUST00000122990	antisense		2	-1	71527927	639
ENSMUSG00000052496	protein_coding	Pkdrej	ENSMUST00000064370	protein_coding	principal1	15	-1	85821734	7065
ENSMUSG00000082202	processed_pseudogene	Gm4910	ENSMUST00000119605	processed_pseudogene		X	-1	68316317	366
ENSMUSG00000028494	protein_coding	Plin2	ENSMUST00000147097	protein_coding		4	-1	86665725	551
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000033994	protein_coding		8	-1	33929806	2375
ENSMUSG00000084946	antisense	Dlx1as	ENSMUST00000143767	antisense		2	-1	71537810	347
ENSMUSG00000083912	processed_pseudogene	Gm5391	ENSMUST00000121155	processed_pseudogene		X	-1	68320250	613
ENSMUSG00000022514	protein_coding	Il1rap	ENSMUST00000166294	protein_coding		16	1	26581742	3200
ENSMUSG00000030752	protein_coding	Kdm8	ENSMUST00000033010	protein_coding	principal1	7	1	125444676	2389
ENSMUSG00000084946	antisense	Dlx1as	ENSMUST00000137251	antisense		2	-1	71537891	647
ENSMUSG00000028494	protein_coding	Plin2	ENSMUST00000149700	protein_coding		4	-1	86669560	730
ENSMUSG00000100696	processed_pseudogene	Gm8419	ENSMUST00000189886	processed_pseudogene		1	-1	51938665	412
ENSMUSG00000082794	processed_pseudogene	Gm6806	ENSMUST00000120092	processed_pseudogene		X	1	68503126	1006
ENSMUSG00000028494	protein_coding	Plin2	ENSMUST00000140382	protein_coding		4	-1	86669768	683
ENSMUSG00000026502	protein_coding	Desi2	ENSMUST00000161075	protein_coding		1	1	178187417	2590
ENSMUSG00000072324	processed_pseudogene	Gm8420	ENSMUST00000097103	processed_pseudogene		1	-1	51941261	598
ENSMUSG00000030752	protein_coding	Kdm8	ENSMUST00000135129	protein_coding		7	1	125444684	601
ENSMUSG00000022514	protein_coding	Il1rap	ENSMUST00000174202	protein_coding		16	1	26581753	2306
ENSMUSG00000028494	protein_coding	Plin2	ENSMUST00000134094	processed_transcript		4	-1	86669986	996
ENSMUSG00000117793	processed_pseudogene	Gm5693	ENSMUST00000237233	processed_pseudogene		19	1	40282277	421
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000182987	nonsense_mediated_decay		8	-1	33929816	1385
ENSMUSG00000106604	TEC	Gm42535	ENSMUST00000197312	TEC		5	1	48324612	1399
ENSMUSG00000022514	protein_coding	Il1rap	ENSMUST00000023156	protein_coding	principal3	16	1	26581757	4520
ENSMUSG00000033039	protein_coding	Micall1	ENSMUST00000040320	protein_coding	principal1	15	1	79108964	6712
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000182256	nonsense_mediated_decay		8	-1	33844890	865
ENSMUSG00000022514	protein_coding	Il1rap	ENSMUST00000174171	nonsense_mediated_decay		16	1	26624156	1564
ENSMUSG00000031659	protein_coding	Adcy7	ENSMUST00000169037	protein_coding	principal1	8	1	88272403	5198
ENSMUSG00000036639	protein_coding	Nudt1	ENSMUST00000198660	protein_coding		5	1	140321656	479
ENSMUSG00000037257	protein_coding	Aagab	ENSMUST00000041551	protein_coding	principal1	9	1	63602660	5294
ENSMUSG00000026502	protein_coding	Desi2	ENSMUST00000027783	protein_coding	principal1	1	1	178187532	8802
ENSMUSG00000022514	protein_coding	Il1rap	ENSMUST00000173136	nonsense_mediated_decay		16	1	26722434	3186
ENSMUSG00000075217	protein_coding	Fads2b	ENSMUST00000099923	protein_coding	principal1	2	-1	85519024	2272
ENSMUSG00000022514	protein_coding	Il1rap	ENSMUST00000174644	processed_transcript		16	1	26727042	583
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000183336	nonsense_mediated_decay		8	-1	33806836	549
ENSMUSG00000026502	protein_coding	Desi2	ENSMUST00000159284	protein_coding		1	1	178187847	690
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000182926	nonsense_mediated_decay		8	-1	33806799	405
ENSMUSG00000026502	protein_coding	Desi2	ENSMUST00000069568	protein_coding		1	1	178256103	1193
ENSMUSG00000037257	protein_coding	Aagab	ENSMUST00000213880	nonsense_mediated_decay		9	1	63616988	648
ENSMUSG00000037257	protein_coding	Aagab	ENSMUST00000213702	retained_intron		9	1	63638653	664
ENSMUSG00000111179	protein_coding	Olfr996	ENSMUST00000077075	protein_coding	principal1	2	1	85579215	1068
ENSMUSG00000026135	protein_coding	Zfp142	ENSMUST00000113737	protein_coding	principal3	1	-1	74588028	7473
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000182184	processed_transcript		8	-1	33853673	643
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000183122	retained_intron		8	-1	33797214	525
ENSMUSG00000033039	protein_coding	Micall1	ENSMUST00000229031	nonsense_mediated_decay		15	1	79108983	6490
ENSMUSG00000027519	protein_coding	Rab22a	ENSMUST00000029024	protein_coding	principal1	2	1	173659760	7155
ENSMUSG00000031659	protein_coding	Adcy7	ENSMUST00000171456	protein_coding	principal1	8	1	88289147	5951
ENSMUSG00000033039	protein_coding	Micall1	ENSMUST00000229048	retained_intron		15	1	79109154	1580
ENSMUSG00000036639	protein_coding	Nudt1	ENSMUST00000071881	protein_coding	principal1	5	1	140331860	952
ENSMUSG00000074248	protein_coding	4930432M17Rik	ENSMUST00000196899	protein_coding	principal1	3	1	121670762	1128
ENSMUSG00000092545	antisense	Gm20319	ENSMUST00000172522	antisense		16	-1	26755491	771
ENSMUSG00000033039	protein_coding	Micall1	ENSMUST00000229004	nonsense_mediated_decay		15	1	79109330	661
ENSMUSG00000031659	protein_coding	Adcy7	ENSMUST00000098521	protein_coding	principal1	8	1	88294235	5937
ENSMUSG00000074248	protein_coding	4930432M17Rik	ENSMUST00000098646	protein_coding	principal1	3	1	121671317	525
ENSMUSG00000092545	antisense	Gm20319	ENSMUST00000174385	antisense		16	-1	26755502	541
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000033995	protein_coding	principal4	8	-1	33929805	1039
ENSMUSG00000033039	protein_coding	Micall1	ENSMUST00000229694	retained_intron		15	1	79125052	1907
ENSMUSG00000026135	protein_coding	Zfp142	ENSMUST00000027315	protein_coding	alternative2	1	-1	74588025	6480
ENSMUSG00000020773	protein_coding	Trim47	ENSMUST00000106441	protein_coding	alternative2	11	-1	116110237	2192
ENSMUSG00000092545	antisense	Gm20319	ENSMUST00000173291	antisense		16	-1	26755502	517
ENSMUSG00000027519	protein_coding	Rab22a	ENSMUST00000142820	nonsense_mediated_decay		2	1	173659760	7045
ENSMUSG00000033039	protein_coding	Micall1	ENSMUST00000230779	retained_intron		15	1	79131686	605
ENSMUSG00000106036	lincRNA	Gm43608	ENSMUST00000197703	lincRNA		3	-1	121710246	687
ENSMUSG00000031659	protein_coding	Adcy7	ENSMUST00000211311	retained_intron		8	1	88300379	936
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000183062	protein_coding		8	-1	33843671	459
ENSMUSG00000026135	protein_coding	Zfp142	ENSMUST00000066986	protein_coding	alternative2	1	-1	74588145	5756
ENSMUSG00000027519	protein_coding	Rab22a	ENSMUST00000109110	protein_coding		2	1	173659856	849
ENSMUSG00000033039	protein_coding	Micall1	ENSMUST00000230202	retained_intron		15	1	79131721	700
ENSMUSG00000082570	processed_pseudogene	Gm15711	ENSMUST00000118889	processed_pseudogene		16	1	43312594	535
ENSMUSG00000105767	lincRNA	Gm43607	ENSMUST00000199524	lincRNA		3	-1	121712428	336
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000183088	protein_coding		8	-1	33889782	592
ENSMUSG00000083827	processed_pseudogene	Gm15712	ENSMUST00000120369	processed_pseudogene		16	1	43184573	1156
ENSMUSG00000031659	protein_coding	Adcy7	ENSMUST00000210688	nonsense_mediated_decay		8	1	88312257	2387
ENSMUSG00000103958	processed_pseudogene	Gm8023	ENSMUST00000195298	processed_pseudogene		1	1	178266204	903
ENSMUSG00000082461	processed_pseudogene	Gm8844	ENSMUST00000119460	processed_pseudogene		X	1	86316083	2614
ENSMUSG00000081824	processed_pseudogene	Ndufs5-ps	ENSMUST00000121906	processed_pseudogene		16	1	42955631	319
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000231786	processed_transcript		8	-1	33929276	516
ENSMUSG00000106224	TEC	Gm43823	ENSMUST00000197391	TEC		3	-1	121723402	1808
ENSMUSG00000036639	protein_coding	Nudt1	ENSMUST00000050205	protein_coding	principal1	5	1	140331909	954
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000182871	processed_transcript		8	-1	33891764	317
ENSMUSG00000031659	protein_coding	Adcy7	ENSMUST00000168545	protein_coding	principal1	8	1	88282992	5937
ENSMUSG00000102967	TEC	Gm37946	ENSMUST00000192064	TEC		16	-1	43308281	347
ENSMUSG00000089936	processed_pseudogene	Gm16199	ENSMUST00000160032	processed_pseudogene		6	1	120005998	288
ENSMUSG00000089794	lincRNA	Gm16337	ENSMUST00000160368	lincRNA		3	1	9757607	917
ENSMUSG00000070489	processed_transcript	4930527J03Rik	ENSMUST00000192920	processed_transcript		1	-1	178276641	595
ENSMUSG00000070489	processed_transcript	4930527J03Rik	ENSMUST00000094270	pseudogene		1	-1	178276639	543
ENSMUSG00000116903	antisense	Gm19522	ENSMUST00000231971	antisense		16	-1	42912065	2525
ENSMUSG00000020680	protein_coding	Taf15	ENSMUST00000134185	processed_transcript		11	1	83473086	881
ENSMUSG00000036639	protein_coding	Nudt1	ENSMUST00000110827	protein_coding	principal1	5	1	140331954	744
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000231942	retained_intron		8	-1	33929392	2534
ENSMUSG00000020773	protein_coding	Trim47	ENSMUST00000021120	protein_coding	principal4	11	-1	116110246	2204
ENSMUSG00000036639	protein_coding	Nudt1	ENSMUST00000110826	protein_coding	principal1	5	1	140332395	606
ENSMUSG00000055370	antisense	Gm9968	ENSMUST00000147504	antisense		16	-1	43363666	2990
ENSMUSG00000036639	protein_coding	Nudt1	ENSMUST00000110825	protein_coding		5	1	140332424	599
ENSMUSG00000020773	protein_coding	Trim47	ENSMUST00000149957	processed_transcript		11	-1	116107083	585
ENSMUSG00000026135	protein_coding	Zfp142	ENSMUST00000156613	nonsense_mediated_decay		1	-1	74588246	5902
ENSMUSG00000036639	protein_coding	Nudt1	ENSMUST00000145898	processed_transcript		5	1	140334573	166
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000159903	retained_intron		6	-1	119927261	2934
ENSMUSG00000031586	protein_coding	Rbpms	ENSMUST00000191473	protein_coding	alternative1	8	-1	33929841	2547
ENSMUSG00000020773	protein_coding	Trim47	ENSMUST00000127235	processed_transcript		11	-1	116107740	692
ENSMUSG00000020773	protein_coding	Trim47	ENSMUST00000134691	processed_transcript		11	-1	116108035	782
ENSMUSG00000097442	antisense	Gm26632	ENSMUST00000181120	antisense		8	1	33813203	1400
ENSMUSG00000118440	processed_pseudogene	Gm50483	ENSMUST00000238389	processed_pseudogene		7	1	30334798	408
ENSMUSG00000020773	protein_coding	Trim47	ENSMUST00000133039	processed_transcript		11	-1	116127210	519
ENSMUSG00000026135	protein_coding	Zfp142	ENSMUST00000127921	nonsense_mediated_decay		1	-1	74585663	5020
ENSMUSG00000093626	protein_coding	Ly6l	ENSMUST00000177479	protein_coding	principal1	15	1	75449457	430
ENSMUSG00000027223	protein_coding	Mapk8ip1	ENSMUST00000111279	protein_coding	alternative2	2	-1	92392731	3274
ENSMUSG00000109049	lincRNA	4930479H17Rik	ENSMUST00000208824	lincRNA		7	-1	30353321	292
ENSMUSG00000116365	unprocessed_pseudogene	Gm34531	ENSMUST00000229638	unprocessed_pseudogene		15	1	75474546	413
ENSMUSG00000035944	protein_coding	Ttc38	ENSMUST00000146088	protein_coding	principal1	15	1	85832306	3749
ENSMUSG00000116222	unprocessed_pseudogene	Gm34593	ENSMUST00000230951	unprocessed_pseudogene		15	1	75498774	420
ENSMUSG00000116155	unprocessed_pseudogene	Gm34646	ENSMUST00000229260	unprocessed_pseudogene		15	1	75517209	922
ENSMUSG00000110959	TEC	Gm47198	ENSMUST00000214736	TEC		9	1	47771141	2235
ENSMUSG00000035944	protein_coding	Ttc38	ENSMUST00000124011	nonsense_mediated_decay		15	1	85832344	342
ENSMUSG00000018736	protein_coding	Ndel1	ENSMUST00000018880	protein_coding	principal1	11	-1	68853135	2382
ENSMUSG00000029557	protein_coding	Mrm2	ENSMUST00000031536	protein_coding	principal1	5	-1	140331898	1443
ENSMUSG00000105679	TEC	Gm43338	ENSMUST00000198617	TEC		5	-1	140323844	2223
ENSMUSG00000026135	protein_coding	Zfp142	ENSMUST00000136865	retained_intron		1	-1	74588195	3876
ENSMUSG00000115137	lincRNA	Gm34794	ENSMUST00000228660	lincRNA		15	-1	52786267	1810
ENSMUSG00000115137	lincRNA	Gm34794	ENSMUST00000228167	lincRNA		15	-1	52786267	709
ENSMUSG00000035944	protein_coding	Ttc38	ENSMUST00000133158	processed_transcript		15	1	85832344	2369
ENSMUSG00000027223	protein_coding	Mapk8ip1	ENSMUST00000050312	protein_coding	principal3	2	-1	92401263	2930
ENSMUSG00000026135	protein_coding	Zfp142	ENSMUST00000130112	retained_intron		1	-1	74587952	3855
ENSMUSG00000036957	protein_coding	Lrfn3	ENSMUST00000046351	protein_coding	principal1	7	-1	30362772	2886
ENSMUSG00000018736	protein_coding	Ndel1	ENSMUST00000143899	processed_transcript		11	-1	68839920	1059
ENSMUSG00000026135	protein_coding	Zfp142	ENSMUST00000147011	processed_transcript		1	-1	74588133	510
ENSMUSG00000018736	protein_coding	Ndel1	ENSMUST00000101017	protein_coding		11	-1	68871858	1646
ENSMUSG00000027223	protein_coding	Mapk8ip1	ENSMUST00000149653	processed_transcript		2	-1	92392732	1816
ENSMUSG00000018736	protein_coding	Ndel1	ENSMUST00000108672	protein_coding		11	-1	68853041	1653
ENSMUSG00000022762	protein_coding	Ncam2	ENSMUST00000037785	protein_coding	principal3	16	1	81200697	4893
ENSMUSG00000044916	protein_coding	1700029I15Rik	ENSMUST00000189714	retained_intron		2	1	92382538	1066
ENSMUSG00000044916	protein_coding	1700029I15Rik	ENSMUST00000191292	nonsense_mediated_decay		2	1	92382918	412
ENSMUSG00000025528	protein_coding	2010106E10Rik	ENSMUST00000026602	protein_coding		X	1	112495274	1257
ENSMUSG00000018736	protein_coding	Ndel1	ENSMUST00000144300	processed_transcript		11	-1	68859996	754
ENSMUSG00000018736	protein_coding	Ndel1	ENSMUST00000127469	processed_transcript		11	-1	68864993	567
ENSMUSG00000108010	lincRNA	Gm38708	ENSMUST00000203855	lincRNA		6	-1	88190681	677
ENSMUSG00000022762	protein_coding	Ncam2	ENSMUST00000067602	protein_coding	alternative2	16	1	81200697	6106
ENSMUSG00000047295	protein_coding	Smgc	ENSMUST00000088555	protein_coding	principal2	15	1	91838328	2977
ENSMUSG00000026828	protein_coding	Galnt5	ENSMUST00000112616	protein_coding	principal1	2	1	57997884	4225
ENSMUSG00000025528	protein_coding	2010106E10Rik	ENSMUST00000113412	protein_coding	principal1	X	1	112495275	1276
ENSMUSG00000032050	protein_coding	Rdx	ENSMUST00000163153	protein_coding	principal2	9	1	52047173	4131
ENSMUSG00000047295	protein_coding	Smgc	ENSMUST00000100293	protein_coding	alternative2	15	1	91838328	2878
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000126354	retained_intron		16	1	42875881	563
ENSMUSG00000047295	protein_coding	Smgc	ENSMUST00000126508	protein_coding		15	1	91838336	592
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000131689	processed_transcript		16	1	42907392	425
ENSMUSG00000030579	protein_coding	Tyrobp	ENSMUST00000207982	protein_coding		7	1	30413760	597
ENSMUSG00000022762	protein_coding	Ncam2	ENSMUST00000231687	processed_transcript		16	1	81200757	3413
ENSMUSG00000047295	protein_coding	Smgc	ENSMUST00000143271	processed_transcript		15	1	91838337	743
ENSMUSG00000030579	protein_coding	Tyrobp	ENSMUST00000208125	nonsense_mediated_decay		7	1	30413852	575
ENSMUSG00000046490	protein_coding	Rnf222	ENSMUST00000065213	protein_coding	principal1	11	1	68888553	3463
ENSMUSG00000047295	protein_coding	Smgc	ENSMUST00000130014	protein_coding		15	1	91841418	1893
ENSMUSG00000026828	protein_coding	Galnt5	ENSMUST00000144671	processed_transcript		2	1	57997884	3812
ENSMUSG00000022762	protein_coding	Ncam2	ENSMUST00000232550	retained_intron		16	1	81465623	931
ENSMUSG00000044916	protein_coding	1700029I15Rik	ENSMUST00000054316	protein_coding	principal1	2	1	92382918	364
ENSMUSG00000032050	protein_coding	Rdx	ENSMUST00000000590	protein_coding	principal2	9	1	52048115	4380
ENSMUSG00000026828	protein_coding	Galnt5	ENSMUST00000166729	protein_coding	principal1	2	1	57997884	3812
ENSMUSG00000110691	processed_pseudogene	Gm5363	ENSMUST00000211927	processed_pseudogene		9	1	4213922	938
ENSMUSG00000047295	protein_coding	Smgc	ENSMUST00000136172	protein_coding		15	1	91845450	1698
ENSMUSG00000032050	protein_coding	Rdx	ENSMUST00000238858	protein_coding	alternative2	9	1	52048171	2163
ENSMUSG00000110461	processed_pseudogene	Gm45860	ENSMUST00000212700	processed_pseudogene		9	-1	4229129	334
ENSMUSG00000047295	protein_coding	Smgc	ENSMUST00000132674	protein_coding		15	1	91847915	1789
ENSMUSG00000057047	protein_coding	1700010B08Rik	ENSMUST00000073081	protein_coding	principal1	2	1	173719415	899
ENSMUSG00000044916	protein_coding	1700029I15Rik	ENSMUST00000111280	protein_coding		2	1	92382918	416
ENSMUSG00000030579	protein_coding	Tyrobp	ENSMUST00000032800	protein_coding	principal1	7	1	30413788	564
ENSMUSG00000027508	protein_coding	Pag1	ENSMUST00000161949	protein_coding	principal1	3	-1	9833679	8256
ENSMUSG00000026174	protein_coding	Cnot9	ENSMUST00000087215	protein_coding	principal1	1	1	74506058	3268
ENSMUSG00000032050	protein_coding	Rdx	ENSMUST00000061352	protein_coding		9	1	52048271	1502
ENSMUSG00000102964	TEC	9430034N14Rik	ENSMUST00000193532	TEC		1	-1	156030007	3785
ENSMUSG00000027508	protein_coding	Pag1	ENSMUST00000108384	protein_coding	principal1	3	-1	9833630	3729
ENSMUSG00000117540	processed_pseudogene	Gm9360	ENSMUST00000234396	processed_pseudogene		17	1	75661240	987
ENSMUSG00000026174	protein_coding	Cnot9	ENSMUST00000137100	processed_transcript		1	1	74506060	831
ENSMUSG00000026174	protein_coding	Cnot9	ENSMUST00000147810	retained_intron		1	1	74523527	772
ENSMUSG00000117587	processed_pseudogene	Gm50099	ENSMUST00000235034	processed_pseudogene		17	1	75833837	420
ENSMUSG00000027508	protein_coding	Pag1	ENSMUST00000159825	retained_intron		3	-1	9705002	2406
ENSMUSG00000103227	TEC	Gm37733	ENSMUST00000195478	TEC		1	-1	74503301	2962
ENSMUSG00000026830	protein_coding	Ermn	ENSMUST00000090940	protein_coding	principal1	2	-1	58052864	3635
ENSMUSG00000027508	protein_coding	Pag1	ENSMUST00000163022	retained_intron		3	-1	9833363	625
ENSMUSG00000027508	protein_coding	Pag1	ENSMUST00000159497	processed_transcript		3	-1	9833630	1158
ENSMUSG00000064109	protein_coding	Hcst	ENSMUST00000208740	protein_coding		7	-1	30419802	366
ENSMUSG00000072714	processed_pseudogene	Rpl21-ps4	ENSMUST00000080237	processed_pseudogene		14	1	11227552	438
ENSMUSG00000064109	protein_coding	Hcst	ENSMUST00000075062	protein_coding	principal1	7	-1	30419854	442
ENSMUSG00000064109	protein_coding	Hcst	ENSMUST00000207504	retained_intron		7	-1	30419827	428
ENSMUSG00000026567	protein_coding	Adcy10	ENSMUST00000111440	protein_coding	alternative2	1	1	165485183	5078
ENSMUSG00000097148	protein_coding	Gm3839	ENSMUST00000181173	protein_coding	principal1	14	-1	11356726	1712
ENSMUSG00000114216	processed_pseudogene	Gm48592	ENSMUST00000223779	processed_pseudogene		14	1	11392560	366
ENSMUSG00000110663	lincRNA	Gm39157	ENSMUST00000212322	lincRNA		8	1	33985914	1180
ENSMUSG00000020680	protein_coding	Taf15	ENSMUST00000021018	protein_coding	principal1	11	1	83473092	2068
ENSMUSG00000110614	TEC	Gm45817	ENSMUST00000212738	TEC		8	-1	33987200	1757
ENSMUSG00000054455	protein_coding	Vapb	ENSMUST00000067530	protein_coding	principal1	2	1	173737511	7032
ENSMUSG00000020680	protein_coding	Taf15	ENSMUST00000152405	retained_intron		11	1	83473111	649
ENSMUSG00000114850	processed_pseudogene	Gm8438	ENSMUST00000224598	processed_pseudogene		14	-1	11491658	627
ENSMUSG00000020680	protein_coding	Taf15	ENSMUST00000126134	processed_transcript		11	1	83473115	848
ENSMUSG00000054618	lincRNA	Gm9951	ENSMUST00000139529	lincRNA		8	1	34049262	513
ENSMUSG00000020680	protein_coding	Taf15	ENSMUST00000133170	protein_coding		11	1	83489027	1260
ENSMUSG00000114786	lincRNA	Gm48594	ENSMUST00000225280	lincRNA		14	1	11460359	816
ENSMUSG00000054455	protein_coding	Vapb	ENSMUST00000154306	processed_transcript		2	1	173768200	527
ENSMUSG00000081047	unprocessed_pseudogene	Olfr997-ps1	ENSMUST00000117353	unprocessed_pseudogene		2	1	85585104	939
ENSMUSG00000054618	lincRNA	Gm9951	ENSMUST00000149618	lincRNA		8	1	34054622	1772
ENSMUSG00000118399	processed_pseudogene	Gm18917	ENSMUST00000238291	processed_pseudogene		2	1	173749938	550
ENSMUSG00000111454	protein_coding	Olfr998	ENSMUST00000215083	protein_coding	principal1	2	1	85588948	1399
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000065941	protein_coding	principal2	1	-1	171287991	2219
ENSMUSG00000026567	protein_coding	Adcy10	ENSMUST00000148550	nonsense_mediated_decay		1	1	165485183	5569
ENSMUSG00000111454	protein_coding	Olfr998	ENSMUST00000052307	protein_coding	principal1	2	1	85590510	1012
ENSMUSG00000022035	protein_coding	Ccdc25	ENSMUST00000022614	protein_coding	principal1	14	1	65837302	2230
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000111305	protein_coding	principal2	1	-1	171287924	2278
ENSMUSG00000026567	protein_coding	Adcy10	ENSMUST00000027852	protein_coding	principal2	1	1	165485183	5210
ENSMUSG00000050565	protein_coding	Tor1aip2	ENSMUST00000111757	protein_coding	principal1	1	1	156035403	6118
ENSMUSG00000071151	processed_pseudogene	Gm4799	ENSMUST00000095396	processed_pseudogene		10	1	82954344	657
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000144393	retained_intron		1	-1	171282906	755
ENSMUSG00000022035	protein_coding	Ccdc25	ENSMUST00000225823	retained_intron		14	1	65837357	3555
ENSMUSG00000081955	unprocessed_pseudogene	Olfr999-ps1	ENSMUST00000122319	unprocessed_pseudogene		2	-1	85602717	949
ENSMUSG00000090216	antisense	Gm16549	ENSMUST00000160445	antisense		14	1	72589752	503
ENSMUSG00000033852	protein_coding	Gm28042	ENSMUST00000162393	nonsense_mediated_decay		2	1	120027493	5092
ENSMUSG00000022035	protein_coding	Ccdc25	ENSMUST00000226027	retained_intron		14	1	65837360	407
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000149187	nonsense_mediated_decay		1	-1	171287955	2091
ENSMUSG00000026567	protein_coding	Adcy10	ENSMUST00000111439	protein_coding	alternative2	1	1	165485189	5193
ENSMUSG00000085204	processed_transcript	Gm15327	ENSMUST00000149252	processed_transcript		13	1	111809141	347
ENSMUSG00000015053	protein_coding	Gata2	ENSMUST00000170089	protein_coding	principal1	6	1	88193891	3135
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000111306	protein_coding	alternative1	1	-1	171287961	2185
ENSMUSG00000085204	processed_transcript	Gm15327	ENSMUST00000153958	processed_transcript		13	1	111810468	467
ENSMUSG00000026567	protein_coding	Adcy10	ENSMUST00000194745	processed_transcript		1	1	165485193	955
ENSMUSG00000117539	lincRNA	Gm4710	ENSMUST00000234389	lincRNA		17	1	75861023	1178
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000142656	retained_intron		1	-1	171283167	598
ENSMUSG00000050565	protein_coding	Tor1aip2	ENSMUST00000111754	protein_coding		1	1	156035726	2491
ENSMUSG00000066958	processed_pseudogene	Gm16391	ENSMUST00000086601	processed_pseudogene		17	-1	76284861	447
ENSMUSG00000015053	protein_coding	Gata2	ENSMUST00000203480	protein_coding		6	1	88198334	423
ENSMUSG00000050565	protein_coding	Tor1aip2	ENSMUST00000133152	protein_coding		1	1	156035772	452
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000126729	retained_intron		1	-1	171284587	822
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000126557	retained_intron		1	-1	171283986	695
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000163239	protein_coding		1	1	57774365	2313
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000163922	retained_intron		1	1	57774419	1207
ENSMUSG00000112084	TEC	Gm10773	ENSMUST00000218071	TEC		10	-1	83031695	3935
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000147176	retained_intron		1	-1	171285614	864
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000167971	protein_coding		1	1	57774600	691
ENSMUSG00000015053	protein_coding	Gata2	ENSMUST00000015197	protein_coding	principal1	6	1	88198334	3571
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000127101	retained_intron		1	-1	171286950	1966
ENSMUSG00000026567	protein_coding	Adcy10	ENSMUST00000155216	nonsense_mediated_decay		1	1	165485211	5083
ENSMUSG00000033590	protein_coding	Myo5c	ENSMUST00000036555	protein_coding	principal1	9	1	75232020	6727
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000153164	retained_intron		1	-1	171287959	2706
ENSMUSG00000026567	protein_coding	Adcy10	ENSMUST00000193149	protein_coding		1	1	165503943	607
ENSMUSG00000015053	protein_coding	Gata2	ENSMUST00000205151	retained_intron		6	1	88200919	1723
ENSMUSG00000033852	protein_coding	Gm28042	ENSMUST00000129685	protein_coding	principal5	2	1	120027504	4472
ENSMUSG00000053483	protein_coding	Usp21	ENSMUST00000174720	protein_coding		1	-1	171286806	484
ENSMUSG00000015053	protein_coding	Gata2	ENSMUST00000203579	retained_intron		6	1	88204445	841
ENSMUSG00000033852	protein_coding	Gm28042	ENSMUST00000156805	protein_coding	alternative2	2	1	120027507	2844
ENSMUSG00000026567	protein_coding	Adcy10	ENSMUST00000195194	retained_intron		1	1	165509911	2035
ENSMUSG00000026567	protein_coding	Adcy10	ENSMUST00000194554	retained_intron		1	1	165516674	1812
ENSMUSG00000033590	protein_coding	Myo5c	ENSMUST00000215437	processed_transcript		9	1	75232052	792
ENSMUSG00000026567	protein_coding	Adcy10	ENSMUST00000124037	processed_transcript		1	1	165543104	684
ENSMUSG00000082162	processed_pseudogene	Gm14701	ENSMUST00000117156	processed_pseudogene		X	1	68613793	348
ENSMUSG00000033852	protein_coding	Gm28042	ENSMUST00000125805	nonsense_mediated_decay		2	1	120031848	772
ENSMUSG00000034612	protein_coding	Chst11	ENSMUST00000040110	protein_coding	principal1	10	1	82985498	5527
ENSMUSG00000117214	unprocessed_pseudogene	Gm49813	ENSMUST00000233966	unprocessed_pseudogene		17	1	38591317	371
ENSMUSG00000090200	antisense	1700025N21Rik	ENSMUST00000160997	antisense		10	-1	83142038	686
ENSMUSG00000031255	protein_coding	Sytl4	ENSMUST00000113297	protein_coding		X	-1	133981783	3306
ENSMUSG00000095322	protein_coding	Olfr957	ENSMUST00000216177	protein_coding	principal1	9	-1	39515809	1726
ENSMUSG00000095322	protein_coding	Olfr957	ENSMUST00000051653	protein_coding	principal1	9	-1	39511718	936
ENSMUSG00000033590	protein_coding	Myo5c	ENSMUST00000216788	nonsense_mediated_decay		9	1	75232076	4782
ENSMUSG00000050565	protein_coding	Tor1aip2	ENSMUST00000128941	protein_coding		1	1	156036133	2925
ENSMUSG00000075215	protein_coding	Olfr1000	ENSMUST00000216571	protein_coding	principal1	2	-1	85611868	2028
ENSMUSG00000117213	unprocessed_pseudogene	Gm49814	ENSMUST00000233680	unprocessed_pseudogene		17	-1	38609367	297
ENSMUSG00000033590	protein_coding	Myo5c	ENSMUST00000215352	retained_intron		9	1	75255863	483
ENSMUSG00000075215	protein_coding	Olfr1000	ENSMUST00000213837	protein_coding	principal1	2	-1	85611903	1915
ENSMUSG00000074923	protein_coding	Pak6	ENSMUST00000099557	protein_coding	principal1	2	1	118663303	4411
ENSMUSG00000075215	protein_coding	Olfr1000	ENSMUST00000099921	protein_coding	principal1	2	-1	85608908	945
ENSMUSG00000094638	protein_coding	Gm21972	ENSMUST00000135197	nonsense_mediated_decay	principal1	1	1	86133637	776
ENSMUSG00000092342	protein_coding	Esp31	ENSMUST00000174742	protein_coding	principal1	17	1	38639447	1311
ENSMUSG00000050565	protein_coding	Tor1aip2	ENSMUST00000131359	processed_transcript		1	1	156040890	621
ENSMUSG00000050565	protein_coding	Tor1aip2	ENSMUST00000060404	protein_coding	principal1	1	1	156040890	5135
ENSMUSG00000087538	antisense	Gm16341	ENSMUST00000126385	antisense		1	-1	86301375	377
ENSMUSG00000117273	unprocessed_pseudogene	Gm49815	ENSMUST00000233036	unprocessed_pseudogene		17	1	38719192	198
ENSMUSG00000015605	protein_coding	Srf	ENSMUST00000015749	protein_coding	principal1	17	-1	46556175	2616
ENSMUSG00000086861	lincRNA	Gm15325	ENSMUST00000149661	lincRNA		13	-1	111852622	697
ENSMUSG00000074923	protein_coding	Pak6	ENSMUST00000110853	protein_coding	principal1	2	1	118677229	3677
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000170139	protein_coding	principal2	1	1	57774735	2315
ENSMUSG00000033590	protein_coding	Myo5c	ENSMUST00000215620	retained_intron		9	1	75287831	3189
ENSMUSG00000086057	lincRNA	Gm15324	ENSMUST00000139397	lincRNA		13	1	111856996	355
ENSMUSG00000060938	protein_coding	Rpl26	ENSMUST00000073471	protein_coding	principal2	11	1	68901583	526
ENSMUSG00000015605	protein_coding	Srf	ENSMUST00000233767	retained_intron		17	-1	46550100	637
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000171699	protein_coding		1	1	57774744	965
ENSMUSG00000050853	protein_coding	Olfr958	ENSMUST00000215505	protein_coding	principal1	9	-1	39554053	3514
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000164302	protein_coding	alternative1	1	1	57774755	2088
ENSMUSG00000033590	protein_coding	Myo5c	ENSMUST00000213424	processed_transcript		9	1	75295159	1847
ENSMUSG00000050853	protein_coding	Olfr958	ENSMUST00000217227	protein_coding	principal1	9	-1	39554054	3831
ENSMUSG00000015605	protein_coding	Srf	ENSMUST00000233104	protein_coding		17	-1	46551019	376
ENSMUSG00000074923	protein_coding	Pak6	ENSMUST00000132577	retained_intron		2	1	118677263	3248
ENSMUSG00000033590	protein_coding	Myo5c	ENSMUST00000216529	retained_intron		9	1	75299989	2204
ENSMUSG00000015605	protein_coding	Srf	ENSMUST00000233797	retained_intron		17	-1	46551793	595
ENSMUSG00000050853	protein_coding	Olfr958	ENSMUST00000062545	protein_coding	principal1	9	-1	39550869	942
ENSMUSG00000074923	protein_coding	Pak6	ENSMUST00000152550	retained_intron		2	1	118663762	436
ENSMUSG00000086111	lincRNA	Gm15326	ENSMUST00000128198	lincRNA		13	1	111867936	1422
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000112431	protein_coding	alternative2	2	-1	65238721	5024
ENSMUSG00000081084	processed_pseudogene	Gm5638	ENSMUST00000118618	processed_pseudogene		X	1	68629428	1258
ENSMUSG00000060938	protein_coding	Rpl26	ENSMUST00000101014	protein_coding	alternative1	11	1	68901610	657
ENSMUSG00000086111	lincRNA	Gm15326	ENSMUST00000127817	lincRNA		13	1	111871140	319
ENSMUSG00000060938	protein_coding	Rpl26	ENSMUST00000128952	protein_coding		11	1	68901627	500
ENSMUSG00000031255	protein_coding	Sytl4	ENSMUST00000033608	protein_coding	principal1	X	-1	133981812	3753
ENSMUSG00000074923	protein_coding	Pak6	ENSMUST00000132843	processed_transcript		2	1	118664064	382
ENSMUSG00000111566	polymorphic_pseudogene	Olfr1001-ps1	ENSMUST00000121340	polymorphic_pseudogene	principal1	2	1	85633431	945
ENSMUSG00000060938	protein_coding	Rpl26	ENSMUST00000134403	retained_intron		11	1	68902853	636
ENSMUSG00000031255	protein_coding	Sytl4	ENSMUST00000113294	protein_coding		X	-1	133981812	2958
ENSMUSG00000060938	protein_coding	Rpl26	ENSMUST00000138973	processed_transcript		11	1	68903234	490
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000167085	protein_coding		1	1	57774861	3929
ENSMUSG00000098488	protein_coding	Pla2g4b	ENSMUST00000134380	retained_intron		2	1	120033417	4240
ENSMUSG00000075214	protein_coding	Olfr1002	ENSMUST00000215548	protein_coding	principal1	2	-1	85650704	2295
ENSMUSG00000060938	protein_coding	Rpl26	ENSMUST00000167436	protein_coding	principal2	11	1	68901635	606
ENSMUSG00000050565	protein_coding	Tor1aip2	ENSMUST00000065648	protein_coding		1	1	156040917	2529
ENSMUSG00000075214	protein_coding	Olfr1002	ENSMUST00000099920	protein_coding	principal1	2	-1	85648319	957
ENSMUSG00000031255	protein_coding	Sytl4	ENSMUST00000174091	processed_transcript		X	-1	133960990	624
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000102726	protein_coding	principal3	2	-1	65238626	5031
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000168016	retained_intron		1	1	57774890	2348
ENSMUSG00000050565	protein_coding	Tor1aip2	ENSMUST00000097526	protein_coding		1	1	156040917	2589
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000165235	retained_intron		1	1	57774912	417
ENSMUSG00000031255	protein_coding	Sytl4	ENSMUST00000174542	protein_coding		X	-1	133981809	741
ENSMUSG00000087635	processed_pseudogene	Gm13414	ENSMUST00000117516	processed_pseudogene		2	-1	34650240	727
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000168895	retained_intron		1	1	57774917	384
ENSMUSG00000111348	antisense	Gm19531	ENSMUST00000216737	antisense		9	-1	75314871	1377
ENSMUSG00000082433	processed_pseudogene	Gm9025	ENSMUST00000122415	processed_pseudogene		13	-1	111884177	1575
ENSMUSG00000050565	protein_coding	Tor1aip2	ENSMUST00000125371	retained_intron		1	1	156063213	624
ENSMUSG00000107776	TEC	Gm44388	ENSMUST00000204350	TEC		6	-1	88216502	258
ENSMUSG00000114429	processed_pseudogene	Gm9025	ENSMUST00000225689	processed_pseudogene		13	-1	111884177	1573
ENSMUSG00000027443	protein_coding	Cst12	ENSMUST00000028932	protein_coding	alternative2	2	1	148789372	644
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000169772	protein_coding	principal2	1	1	57845571	2311
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000090896	protein_coding	alternative2	2	-1	65238573	4867
ENSMUSG00000084845	protein_coding	Tmem240	ENSMUST00000176526	retained_intron		4	1	155734804	5510
ENSMUSG00000027443	protein_coding	Cst12	ENSMUST00000168443	protein_coding	principal2	2	1	148789361	546
ENSMUSG00000038305	protein_coding	Spats2l	ENSMUST00000164353	retained_intron		1	1	57902071	323
ENSMUSG00000030061	protein_coding	Uba3	ENSMUST00000164744	protein_coding	alternative1	6	-1	97205560	2465
ENSMUSG00000117331	unprocessed_pseudogene	Gm49816	ENSMUST00000232981	unprocessed_pseudogene		17	-1	38752729	298
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000112430	protein_coding	alternative2	2	-1	65238626	4917
ENSMUSG00000048206	protein_coding	Dnajb8	ENSMUST00000061866	protein_coding	principal1	6	1	88222268	990
ENSMUSG00000117260	unprocessed_pseudogene	Gm49818	ENSMUST00000232995	unprocessed_pseudogene		17	1	38769144	285
ENSMUSG00000117067	unprocessed_pseudogene	Gm49819	ENSMUST00000233900	unprocessed_pseudogene		17	1	38802498	346
ENSMUSG00000048206	protein_coding	Dnajb8	ENSMUST00000203827	nonsense_mediated_decay		6	1	88222885	655
ENSMUSG00000032135	protein_coding	Mcam	ENSMUST00000149241	nonsense_mediated_decay		9	1	44134469	1061
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000124769	processed_transcript		2	-1	65239403	517
ENSMUSG00000084845	protein_coding	Tmem240	ENSMUST00000127188	protein_coding	principal1	4	1	155734874	1308
ENSMUSG00000030061	protein_coding	Uba3	ENSMUST00000204056	nonsense_mediated_decay		6	-1	97205559	2561
ENSMUSG00000047046	antisense	1700031F10Rik	ENSMUST00000151901	antisense		6	-1	88225678	553
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000136537	processed_transcript		2	-1	65239047	3051
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000156643	protein_coding		2	-1	65239096	531
ENSMUSG00000047046	antisense	1700031F10Rik	ENSMUST00000156018	antisense		6	-1	88223639	609
ENSMUSG00000084845	protein_coding	Tmem240	ENSMUST00000147721	protein_coding	principal1	4	1	155734800	817
ENSMUSG00000051209	protein_coding	Gpr119	ENSMUST00000053970	protein_coding	principal1	X	-1	48674478	2269
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000155916	protein_coding		2	-1	65239044	1092
ENSMUSG00000117151	unprocessed_pseudogene	Gm49820	ENSMUST00000232961	unprocessed_pseudogene		17	1	38830842	240
ENSMUSG00000030061	protein_coding	Uba3	ENSMUST00000089287	protein_coding	principal4	6	-1	97205647	2257
ENSMUSG00000059366	protein_coding	Olfr959	ENSMUST00000216298	protein_coding	principal1	9	-1	39575535	5616
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000132478	processed_transcript		2	-1	65235995	546
ENSMUSG00000030061	protein_coding	Uba3	ENSMUST00000204917	retained_intron		6	-1	97197493	2180
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000132979	processed_transcript		2	-1	65238474	338
ENSMUSG00000059366	protein_coding	Olfr959	ENSMUST00000215194	protein_coding	principal1	9	-1	39575569	4339
ENSMUSG00000030061	protein_coding	Uba3	ENSMUST00000204391	retained_intron		6	-1	97205565	614
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000155082	protein_coding		2	-1	65238573	660
ENSMUSG00000030061	protein_coding	Uba3	ENSMUST00000203215	retained_intron		6	-1	97205568	1293
ENSMUSG00000059366	protein_coding	Olfr959	ENSMUST00000079178	protein_coding	principal1	9	-1	39573314	1055
ENSMUSG00000103492	TEC	Gm37412	ENSMUST00000194866	TEC		1	1	14788645	4321
ENSMUSG00000117293	unprocessed_pseudogene	Gm49821	ENSMUST00000233986	unprocessed_pseudogene		17	1	38853507	429
ENSMUSG00000117043	processed_pseudogene	Gm49822	ENSMUST00000233365	processed_pseudogene		17	1	38876927	144
ENSMUSG00000117196	unprocessed_pseudogene	Gm49823	ENSMUST00000233152	unprocessed_pseudogene		17	1	38887755	137
ENSMUSG00000101624	processed_pseudogene	Gm28882	ENSMUST00000185504	processed_pseudogene		1	-1	118651795	314
ENSMUSG00000117330	processed_pseudogene	Gm49824	ENSMUST00000232682	processed_pseudogene		17	-1	38889580	87
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000155768	processed_transcript		2	-1	65105859	713
ENSMUSG00000117005	unprocessed_pseudogene	Gm49825	ENSMUST00000232999	unprocessed_pseudogene		17	1	38926257	391
ENSMUSG00000026380	protein_coding	Tfcp2l1	ENSMUST00000190652	processed_transcript		1	1	118627945	478
ENSMUSG00000117021	processed_pseudogene	Gm49826	ENSMUST00000233915	processed_pseudogene		17	-1	39029585	122
ENSMUSG00000034903	protein_coding	Cobll1	ENSMUST00000112429	protein_coding	alternative2	2	-1	65238626	5045
ENSMUSG00000032921	protein_coding	Odf4	ENSMUST00000038932	protein_coding	principal1	11	-1	68927049	1078
ENSMUSG00000095625	protein_coding	Esp24	ENSMUST00000232955	protein_coding	principal1	17	1	39036695	433
ENSMUSG00000095625	protein_coding	Esp24	ENSMUST00000180245	protein_coding	principal1	17	1	39038285	207
ENSMUSG00000032921	protein_coding	Odf4	ENSMUST00000130271	nonsense_mediated_decay		11	-1	68927081	1131
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000160249	protein_coding	principal3	9	-1	108083346	4426
ENSMUSG00000032921	protein_coding	Odf4	ENSMUST00000156828	nonsense_mediated_decay		11	-1	68926816	808
ENSMUSG00000096697	protein_coding	Esp23	ENSMUST00000178532	protein_coding	principal1	17	-1	39077037	646
ENSMUSG00000047766	protein_coding	Lrrc49	ENSMUST00000150060	nonsense_mediated_decay		9	-1	60688124	4210
ENSMUSG00000032921	protein_coding	Odf4	ENSMUST00000125134	protein_coding		11	-1	68927074	646
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000162355	protein_coding	alternative2	9	-1	108079301	4727
ENSMUSG00000033364	protein_coding	Usp37	ENSMUST00000044260	protein_coding	alternative1	1	-1	74505803	7111
ENSMUSG00000041020	protein_coding	Map7d2	ENSMUST00000112471	protein_coding	principal3	X	1	159414572	3670
ENSMUSG00000033487	protein_coding	Fndc3a	ENSMUST00000089017	protein_coding	principal1	14	-1	72710003	6143
ENSMUSG00000041020	protein_coding	Map7d2	ENSMUST00000145142	protein_coding		X	1	159446008	1312
ENSMUSG00000033487	protein_coding	Fndc3a	ENSMUST00000162825	protein_coding		14	-1	72602962	4100
ENSMUSG00000033364	protein_coding	Usp37	ENSMUST00000189257	protein_coding	principal3	1	-1	74544284	4974
ENSMUSG00000033487	protein_coding	Fndc3a	ENSMUST00000159144	retained_intron		14	-1	72564718	452
ENSMUSG00000098488	protein_coding	Pla2g4b	ENSMUST00000126150	protein_coding	principal1	2	1	120033433	2790
ENSMUSG00000033487	protein_coding	Fndc3a	ENSMUST00000162478	protein_coding		14	-1	72709542	1808
ENSMUSG00000008540	protein_coding	Mgst1	ENSMUST00000008684	protein_coding	principal1	6	1	138140316	1167
ENSMUSG00000033487	protein_coding	Fndc3a	ENSMUST00000161550	processed_transcript		14	-1	72652076	491
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000132881	processed_transcript		16	1	42907542	418
ENSMUSG00000041020	protein_coding	Map7d2	ENSMUST00000043151	protein_coding	alternative2	X	1	159459125	3087
ENSMUSG00000098488	protein_coding	Pla2g4b	ENSMUST00000143794	retained_intron		2	1	120033433	4083
ENSMUSG00000033487	protein_coding	Fndc3a	ENSMUST00000162922	retained_intron		14	-1	72709997	1262
ENSMUSG00000008540	protein_coding	Mgst1	ENSMUST00000120939	protein_coding		6	1	138140528	913
ENSMUSG00000033487	protein_coding	Fndc3a	ENSMUST00000163013	retained_intron		14	-1	72709843	3109
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000151244	protein_coding		16	1	42907645	754
ENSMUSG00000041020	protein_coding	Map7d2	ENSMUST00000156172	protein_coding		X	1	159459137	478
ENSMUSG00000098488	protein_coding	Pla2g4b	ENSMUST00000136042	retained_intron		2	1	120034543	761
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000123618	retained_intron		1	1	86154780	3638
ENSMUSG00000008540	protein_coding	Mgst1	ENSMUST00000204628	protein_coding		6	1	138140554	471
ENSMUSG00000031107	protein_coding	Rbmx2	ENSMUST00000033433	protein_coding	principal1	X	1	48695004	1747
ENSMUSG00000098488	protein_coding	Pla2g4b	ENSMUST00000153571	retained_intron		2	1	120038867	886
ENSMUSG00000041020	protein_coding	Map7d2	ENSMUST00000112470	protein_coding		X	1	159459125	1350
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000151290	retained_intron		16	1	42907652	593
ENSMUSG00000033364	protein_coding	Usp37	ENSMUST00000188012	processed_transcript		1	-1	74467574	1836
ENSMUSG00000008540	protein_coding	Mgst1	ENSMUST00000140932	protein_coding		6	1	138140571	742
ENSMUSG00000098488	protein_coding	Pla2g4b	ENSMUST00000130018	retained_intron		2	1	120040970	634
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000155168	retained_intron		1	1	86154784	2435
ENSMUSG00000031107	protein_coding	Rbmx2	ENSMUST00000139150	processed_transcript		X	1	48706180	432
ENSMUSG00000008540	protein_coding	Mgst1	ENSMUST00000120302	protein_coding	principal1	6	1	138140599	559
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000135973	retained_intron		1	1	86154784	4696
ENSMUSG00000117311	protein_coding	Esp22	ENSMUST00000233133	protein_coding	principal1	17	1	39095334	336
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000153389	retained_intron		1	1	86154786	1024
ENSMUSG00000117207	processed_pseudogene	Gm18784	ENSMUST00000233956	processed_pseudogene		17	1	39113387	1218
ENSMUSG00000008540	protein_coding	Mgst1	ENSMUST00000120230	protein_coding	principal1	6	1	138141370	1027
ENSMUSG00000033364	protein_coding	Usp37	ENSMUST00000191058	retained_intron		1	-1	74505785	6011
ENSMUSG00000117240	unprocessed_pseudogene	Gm49827	ENSMUST00000233660	unprocessed_pseudogene		17	-1	39120003	294
ENSMUSG00000026380	protein_coding	Tfcp2l1	ENSMUST00000027629	protein_coding	principal1	1	1	118627946	9269
ENSMUSG00000117277	unprocessed_pseudogene	Gm49828	ENSMUST00000233616	unprocessed_pseudogene		17	-1	39179775	218
ENSMUSG00000033364	protein_coding	Usp37	ENSMUST00000186282	protein_coding		1	-1	74505806	584
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000134858	processed_transcript		1	1	86154798	2681
ENSMUSG00000033364	protein_coding	Usp37	ENSMUST00000190592	retained_intron		1	-1	74505791	361
ENSMUSG00000033364	protein_coding	Usp37	ENSMUST00000187590	processed_transcript		1	-1	74506283	279
ENSMUSG00000117236	unprocessed_pseudogene	Gm49829	ENSMUST00000233623	unprocessed_pseudogene		17	1	39252755	252
ENSMUSG00000117267	unprocessed_pseudogene	Gm49830	ENSMUST00000232809	unprocessed_pseudogene		17	-1	39377408	198
ENSMUSG00000025529	protein_coding	Zfp711	ENSMUST00000151972	retained_intron		X	1	112600526	2519
ENSMUSG00000078137	protein_coding	Ankrd63	ENSMUST00000104937	protein_coding	principal1	2	-1	118703963	4861
ENSMUSG00000008540	protein_coding	Mgst1	ENSMUST00000118091	protein_coding		6	1	138141586	1030
ENSMUSG00000028678	protein_coding	Kif2c	ENSMUST00000065896	protein_coding	principal3	4	-1	117182639	2842
ENSMUSG00000094024	protein_coding	Esp18	ENSMUST00000179848	protein_coding	principal1	17	1	39406359	1257
ENSMUSG00000102914	processed_pseudogene	Gm35106	ENSMUST00000192731	processed_pseudogene		3	-1	65969151	250
ENSMUSG00000008540	protein_coding	Mgst1	ENSMUST00000125810	protein_coding		6	1	138142854	365
ENSMUSG00000102652	TEC	Gm37078	ENSMUST00000193314	TEC		3	1	65969914	2009
ENSMUSG00000103641	processed_pseudogene	Gm19024	ENSMUST00000194681	processed_pseudogene		3	-1	65989753	1319
ENSMUSG00000098789	protein_coding	Jmjd7	ENSMUST00000044675	protein_coding	principal1	2	1	120027483	1373
ENSMUSG00000028678	protein_coding	Kif2c	ENSMUST00000106436	protein_coding	alternative2	4	-1	117178744	2378
ENSMUSG00000103369	processed_pseudogene	Gm6546	ENSMUST00000192096	processed_pseudogene		3	-1	66031519	766
ENSMUSG00000028678	protein_coding	Kif2c	ENSMUST00000132868	retained_intron		4	-1	117165410	629
ENSMUSG00000100040	processed_pseudogene	Gm28467	ENSMUST00000190981	processed_pseudogene		1	1	118810136	318
ENSMUSG00000098789	protein_coding	Jmjd7	ENSMUST00000135365	nonsense_mediated_decay		2	1	120027504	937
ENSMUSG00000025529	protein_coding	Zfp711	ENSMUST00000071814	protein_coding	alternative1	X	1	112604274	3817
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000052029	protein_coding	principal2	2	-1	121351017	5533
ENSMUSG00000084997	processed_transcript	Gm15471	ENSMUST00000149374	retained_intron		3	1	103803129	1235
ENSMUSG00000028678	protein_coding	Kif2c	ENSMUST00000142205	retained_intron		4	-1	117182542	710
ENSMUSG00000098789	protein_coding	Jmjd7	ENSMUST00000130176	processed_transcript		2	1	120027516	715
ENSMUSG00000098789	protein_coding	Jmjd7	ENSMUST00000139862	processed_transcript		2	1	120027557	610
ENSMUSG00000025529	protein_coding	Zfp711	ENSMUST00000122805	protein_coding		X	1	112615301	694
ENSMUSG00000098789	protein_coding	Jmjd7	ENSMUST00000129679	nonsense_mediated_decay		2	1	120027594	609
ENSMUSG00000025529	protein_coding	Zfp711	ENSMUST00000113409	protein_coding	principal2	X	1	112600526	4330
ENSMUSG00000084997	processed_transcript	Gm15471	ENSMUST00000145893	antisense		3	1	103803136	625
ENSMUSG00000032192	protein_coding	Gnb5	ENSMUST00000213990	protein_coding	principal2	9	1	75306288	1803
ENSMUSG00000085938	unprocessed_pseudogene	Gm14371	ENSMUST00000138925	unprocessed_pseudogene		2	-1	173847670	1518
ENSMUSG00000028678	protein_coding	Kif2c	ENSMUST00000142138	processed_transcript		4	-1	117182606	785
ENSMUSG00000031386	protein_coding	Hcfc1	ENSMUST00000033761	protein_coding	principal2	X	-1	73966357	8138
ENSMUSG00000018925	protein_coding	Heatr9	ENSMUST00000019069	protein_coding	principal1	11	-1	83522175	1875
ENSMUSG00000032192	protein_coding	Gnb5	ENSMUST00000215875	protein_coding	alternative1	9	1	75314136	2105
ENSMUSG00000021190	protein_coding	Lgmn	ENSMUST00000110020	protein_coding	principal1	12	-1	102423769	1835
ENSMUSG00000074899	protein_coding	Sptbn5	ENSMUST00000156159	protein_coding	principal1	2	-1	120085678	11654
ENSMUSG00000028678	protein_coding	Kif2c	ENSMUST00000141675	retained_intron		4	-1	117182592	1009
ENSMUSG00000032135	protein_coding	Mcam	ENSMUST00000034650	protein_coding	principal2	9	1	44134562	2989
ENSMUSG00000028678	protein_coding	Kif2c	ENSMUST00000148918	processed_transcript		4	-1	117178726	596
ENSMUSG00000115493	processed_pseudogene	Gm5673	ENSMUST00000228866	processed_pseudogene		15	-1	56783428	787
ENSMUSG00000028678	protein_coding	Kif2c	ENSMUST00000153953	protein_coding		4	-1	117178742	390
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000110628	protein_coding	alternative2	2	-1	121355330	5404
ENSMUSG00000032192	protein_coding	Gnb5	ENSMUST00000215002	nonsense_mediated_decay		9	1	75314141	952
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000114405	protein_coding	alternative2	X	-1	73911336	6299
ENSMUSG00000032135	protein_coding	Mcam	ENSMUST00000098852	protein_coding	alternative2	9	1	44134658	2772
ENSMUSG00000030562	protein_coding	Nox4	ENSMUST00000124057	protein_coding		7	1	87246096	592
ENSMUSG00000031386	protein_coding	Hcfc1	ENSMUST00000128136	protein_coding		X	-1	73949253	3480
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000110627	protein_coding	alternative2	2	-1	121355333	5494
ENSMUSG00000032192	protein_coding	Gnb5	ENSMUST00000216290	processed_transcript		9	1	75331883	407
ENSMUSG00000018554	protein_coding	Ybx2	ENSMUST00000018698	protein_coding	principal3	11	1	69935796	1673
ENSMUSG00000021190	protein_coding	Lgmn	ENSMUST00000021607	protein_coding	principal1	12	-1	102439813	1990
ENSMUSG00000032135	protein_coding	Mcam	ENSMUST00000216002	protein_coding		9	1	44134661	457
ENSMUSG00000112577	processed_pseudogene	Gm47170	ENSMUST00000218560	processed_pseudogene		10	1	83332724	636
ENSMUSG00000031386	protein_coding	Hcfc1	ENSMUST00000114372	protein_coding	alternative2	X	-1	73966351	8262
ENSMUSG00000024887	protein_coding	Asah2	ENSMUST00000237104	protein_coding	principal2	19	-1	32108156	7049
ENSMUSG00000032192	protein_coding	Gnb5	ENSMUST00000215346	processed_transcript		9	1	75332799	823
ENSMUSG00000061731	protein_coding	Ext1	ENSMUST00000077273	protein_coding	principal1	15	-1	53346159	7663
ENSMUSG00000032192	protein_coding	Gnb5	ENSMUST00000214744	retained_intron		9	1	75334169	633
ENSMUSG00000021190	protein_coding	Lgmn	ENSMUST00000146499	retained_intron		12	-1	102406146	798
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000110626	protein_coding	principal2	2	-1	121350985	5171
ENSMUSG00000022385	protein_coding	Gtse1	ENSMUST00000170629	protein_coding	principal1	15	1	85859745	2641
ENSMUSG00000032135	protein_coding	Mcam	ENSMUST00000147836	protein_coding		9	1	44136544	449
ENSMUSG00000031386	protein_coding	Hcfc1	ENSMUST00000156204	retained_intron		X	-1	73947432	882
ENSMUSG00000032192	protein_coding	Gnb5	ENSMUST00000215891	processed_transcript		9	1	75342985	540
ENSMUSG00000024887	protein_coding	Asah2	ENSMUST00000236504	protein_coding	principal2	19	-1	32103140	4835
ENSMUSG00000030562	protein_coding	Nox4	ENSMUST00000124269	processed_transcript		7	1	87246649	1159
ENSMUSG00000031386	protein_coding	Hcfc1	ENSMUST00000131091	processed_transcript		X	-1	73948346	828
ENSMUSG00000031386	protein_coding	Hcfc1	ENSMUST00000128325	processed_transcript		X	-1	73957429	476
ENSMUSG00000022385	protein_coding	Gtse1	ENSMUST00000231074	protein_coding	principal1	15	1	85859946	2692
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000114694	protein_coding	principal3	16	1	42907652	26901
ENSMUSG00000032192	protein_coding	Gnb5	ENSMUST00000076889	protein_coding	principal2	9	1	75311395	1188
ENSMUSG00000032135	protein_coding	Mcam	ENSMUST00000132490	retained_intron		9	1	44136861	832
ENSMUSG00000018554	protein_coding	Ybx2	ENSMUST00000149194	protein_coding		11	1	69935914	1235
ENSMUSG00000110824	antisense	Gm48677	ENSMUST00000213336	antisense		9	-1	75342842	614
ENSMUSG00000104126	processed_pseudogene	Gm37486	ENSMUST00000195663	processed_pseudogene		1	1	178299396	405
ENSMUSG00000083012	protein_coding	Fam220a	ENSMUST00000200267	protein_coding	principal1	5	1	143548708	2202
ENSMUSG00000018554	protein_coding	Ybx2	ENSMUST00000108601	protein_coding	alternative2	11	1	69936327	1351
ENSMUSG00000116435	bidirectional_promoter_lncRNA	Gm49548	ENSMUST00000229871	bidirectional_promoter_lncRNA		15	-1	85879090	623
ENSMUSG00000027845	protein_coding	Dclre1b	ENSMUST00000063502	protein_coding		3	-1	103809378	4113
ENSMUSG00000097617	antisense	Gm10687	ENSMUST00000180670	antisense		9	-1	44134485	3233
ENSMUSG00000018554	protein_coding	Ybx2	ENSMUST00000130377	retained_intron		11	1	69939847	489
ENSMUSG00000061731	protein_coding	Ext1	ENSMUST00000133362	nonsense_mediated_decay		15	-1	53345659	1554
ENSMUSG00000081816	processed_pseudogene	Gm15528	ENSMUST00000117821	processed_pseudogene		13	-1	75930328	864
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000161673	retained_intron		9	-1	108079740	4658
ENSMUSG00000024887	protein_coding	Asah2	ENSMUST00000235213	protein_coding	alternative2	19	-1	32103124	2929
ENSMUSG00000018554	protein_coding	Ybx2	ENSMUST00000148395	retained_intron		11	1	69940544	679
ENSMUSG00000030562	protein_coding	Nox4	ENSMUST00000127138	retained_intron		7	1	87246649	3921
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000159523	retained_intron		9	-1	108052230	445
ENSMUSG00000024887	protein_coding	Asah2	ENSMUST00000236030	protein_coding	principal2	19	-1	32108149	3062
ENSMUSG00000083012	protein_coding	Fam220a	ENSMUST00000196487	protein_coding	principal1	5	1	143548761	2278
ENSMUSG00000081201	processed_pseudogene	Smt3h2-ps4	ENSMUST00000121569	processed_pseudogene		1	-1	14840156	288
ENSMUSG00000061731	protein_coding	Ext1	ENSMUST00000110244	processed_transcript		15	-1	53196255	816
ENSMUSG00000061731	protein_coding	Ext1	ENSMUST00000140798	retained_intron		15	-1	53107868	871
ENSMUSG00000032191	protein_coding	Bcl2l10	ENSMUST00000034709	protein_coding	principal1	9	1	75347758	1237
ENSMUSG00000083012	protein_coding	Fam220a	ENSMUST00000198982	retained_intron		5	1	143548762	2114
ENSMUSG00000116575	lincRNA	Gm49648	ENSMUST00000231772	lincRNA		16	-1	67741117	413
ENSMUSG00000024887	protein_coding	Asah2	ENSMUST00000237697	processed_transcript		19	-1	32016804	377
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000159306	nonsense_mediated_decay		9	-1	108059730	1137
ENSMUSG00000082193	processed_pseudogene	Rpl5-ps1	ENSMUST00000121367	processed_pseudogene		1	1	14865072	894
ENSMUSG00000083012	protein_coding	Fam220a	ENSMUST00000198994	processed_transcript		5	1	143549040	487
ENSMUSG00000083906	processed_pseudogene	Gm15186	ENSMUST00000119345	processed_pseudogene		X	1	159588465	563
ENSMUSG00000023972	protein_coding	Ptk7	ENSMUST00000232855	processed_transcript		17	-1	46572950	2819
ENSMUSG00000024887	protein_coding	Asah2	ENSMUST00000235273	protein_coding		19	-1	32108211	4096
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000160649	protein_coding		9	-1	108079375	3919
ENSMUSG00000024887	protein_coding	Asah2	ENSMUST00000236208	protein_coding		19	-1	32108168	1597
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000159526	retained_intron		9	-1	108052699	322
ENSMUSG00000118332	protein_coding	Fam220a	ENSMUST00000119488	protein_coding		5	1	143548708	2202
ENSMUSG00000024887	protein_coding	Asah2	ENSMUST00000236122	retained_intron		19	-1	32108166	3460
ENSMUSG00000024887	protein_coding	Asah2	ENSMUST00000235395	processed_transcript		19	-1	32068744	349
ENSMUSG00000111495	processed_pseudogene	Gm5366	ENSMUST00000215494	processed_pseudogene		9	-1	75375948	1338
ENSMUSG00000026466	protein_coding	Tor1aip1	ENSMUST00000097527	protein_coding	alternative2	1	-1	156036427	4234
ENSMUSG00000034591	protein_coding	Slc41a2	ENSMUST00000039956	protein_coding	principal1	10	-1	83337882	4742
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000159136	retained_intron		9	-1	108079728	3789
ENSMUSG00000111545	processed_pseudogene	Gm18015	ENSMUST00000214879	processed_pseudogene		9	-1	75373099	316
ENSMUSG00000035199	protein_coding	Arl6ip5	ENSMUST00000044681	protein_coding	principal1	6	1	97210689	1442
ENSMUSG00000118332	protein_coding	Fam220a	ENSMUST00000118121	protein_coding		5	1	143548746	919
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000162123	retained_intron		9	-1	108057039	545
ENSMUSG00000024887	protein_coding	Asah2	ENSMUST00000096119	protein_coding	principal2	19	-1	32061469	4682
ENSMUSG00000042688	protein_coding	Mapk6	ENSMUST00000173230	processed_transcript		9	-1	75389019	265
ENSMUSG00000034591	protein_coding	Slc41a2	ENSMUST00000139329	processed_transcript		10	-1	83304375	363
ENSMUSG00000034591	protein_coding	Slc41a2	ENSMUST00000154926	protein_coding		10	-1	83322883	620
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000162753	nonsense_mediated_decay		9	-1	108059765	719
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000110625	protein_coding	alternative2	2	-1	121355396	5226
ENSMUSG00000118332	protein_coding	Fam220a	ENSMUST00000101434	nonsense_mediated_decay		5	1	143548761	2276
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000146708	protein_coding		16	1	43235880	821
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000160841	retained_intron		9	-1	108061989	745
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000132114	protein_coding		2	-1	121337163	812
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000134537	retained_intron		16	1	43236039	645
ENSMUSG00000034591	protein_coding	Slc41a2	ENSMUST00000126617	protein_coding		10	-1	83337440	663
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000132613	protein_coding		2	-1	121334504	595
ENSMUSG00000118332	protein_coding	Fam220a	ENSMUST00000169329	protein_coding	principal1	5	1	143548706	2331
ENSMUSG00000034591	protein_coding	Slc41a2	ENSMUST00000154730	protein_coding		10	-1	83335402	419
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000161828	protein_coding		9	-1	108078269	799
ENSMUSG00000118332	protein_coding	Fam220a	ENSMUST00000067145	protein_coding	principal1	5	1	143548706	2198
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000127255	protein_coding		2	-1	121336733	850
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000155568	protein_coding		2	-1	121337159	772
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000174504	protein_coding		9	-1	108079305	347
ENSMUSG00000044086	protein_coding	Lmod3	ENSMUST00000095655	protein_coding	principal1	6	-1	97252759	2215
ENSMUSG00000028128	protein_coding	F3	ENSMUST00000029771	protein_coding	principal1	3	1	121723537	1872
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000162152	processed_transcript		9	-1	108073121	332
ENSMUSG00000026466	protein_coding	Tor1aip1	ENSMUST00000136331	nonsense_mediated_decay		1	-1	156036480	2723
ENSMUSG00000115172	lincRNA	Gm2582	ENSMUST00000228364	lincRNA		15	-1	57006624	867
ENSMUSG00000086402	lincRNA	Gm15322	ENSMUST00000142621	lincRNA		13	1	111991466	739
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000064376	protein_coding	principal3	X	-1	73911330	3353
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000162516	protein_coding		9	-1	108079266	365
ENSMUSG00000021589	protein_coding	Rhobtb3	ENSMUST00000022078	protein_coding	principal1	13	-1	75943867	4980
ENSMUSG00000082577	unprocessed_pseudogene	Olfr1003-ps1	ENSMUST00000122238	unprocessed_pseudogene		2	1	85653334	717
ENSMUSG00000026466	protein_coding	Tor1aip1	ENSMUST00000027738	protein_coding	principal3	1	-1	156036480	1952
ENSMUSG00000028128	protein_coding	F3	ENSMUST00000196746	processed_transcript		3	1	121723570	700
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000114406	protein_coding		X	-1	73911296	2749
ENSMUSG00000038957	protein_coding	Edc3	ENSMUST00000043990	protein_coding	principal1	9	1	57708540	5708
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000159372	protein_coding		9	-1	108083344	369
ENSMUSG00000027845	protein_coding	Dclre1b	ENSMUST00000029435	protein_coding	principal1	3	-1	103809444	4345
ENSMUSG00000086092	lincRNA	Gm15323	ENSMUST00000156109	lincRNA		13	1	112005502	429
ENSMUSG00000028128	protein_coding	F3	ENSMUST00000197731	retained_intron		3	1	121729323	890
ENSMUSG00000027832	protein_coding	Ptx3	ENSMUST00000029421	protein_coding	principal1	3	1	66219910	1898
ENSMUSG00000021589	protein_coding	Rhobtb3	ENSMUST00000123353	processed_transcript		13	-1	75885667	937
ENSMUSG00000028128	protein_coding	F3	ENSMUST00000199997	protein_coding		3	1	121729547	1130
ENSMUSG00000021589	protein_coding	Rhobtb3	ENSMUST00000222923	protein_coding		13	-1	75877395	303
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000178267	protein_coding	principal3	9	-1	108079375	4309
ENSMUSG00000027845	protein_coding	Dclre1b	ENSMUST00000106834	protein_coding	principal1	3	-1	103809411	3705
ENSMUSG00000026175	protein_coding	Vil1	ENSMUST00000027366	protein_coding	principal1	1	1	74409376	3124
ENSMUSG00000027832	protein_coding	Ptx3	ENSMUST00000182521	retained_intron		3	1	66220245	1186
ENSMUSG00000042688	protein_coding	Mapk6	ENSMUST00000049355	protein_coding	principal1	9	-1	75410005	4072
ENSMUSG00000104307	processed_pseudogene	Gm36973	ENSMUST00000193942	processed_pseudogene		3	1	66099805	259
ENSMUSG00000027845	protein_coding	Dclre1b	ENSMUST00000147894	retained_intron		3	-1	103809325	5946
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000132617	retained_intron		2	-1	121337023	3910
ENSMUSG00000103208	processed_pseudogene	Gm37330	ENSMUST00000192606	processed_pseudogene		3	-1	66191245	153
ENSMUSG00000086350	antisense	B230369F24Rik	ENSMUST00000141846	antisense		1	-1	178318549	2560
ENSMUSG00000027845	protein_coding	Dclre1b	ENSMUST00000198752	protein_coding		3	-1	103808180	1435
ENSMUSG00000026175	protein_coding	Vil1	ENSMUST00000159749	protein_coding		1	1	74419053	744
ENSMUSG00000021589	protein_coding	Rhobtb3	ENSMUST00000220939	nonsense_mediated_decay		13	-1	75913450	712
ENSMUSG00000042688	protein_coding	Mapk6	ENSMUST00000174034	retained_intron		9	-1	75397607	615
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000114691	protein_coding	alternative2	16	1	43247284	2891
ENSMUSG00000026466	protein_coding	Tor1aip1	ENSMUST00000136397	protein_coding		1	-1	156032953	620
ENSMUSG00000027845	protein_coding	Dclre1b	ENSMUST00000198835	retained_intron		3	-1	103807636	700
ENSMUSG00000097968	processed_pseudogene	Tpi-rs2	ENSMUST00000182471	processed_pseudogene		3	-1	66129723	756
ENSMUSG00000042688	protein_coding	Mapk6	ENSMUST00000172946	retained_intron		9	-1	75409996	3228
ENSMUSG00000021589	protein_coding	Rhobtb3	ENSMUST00000109606	protein_coding		13	-1	75943925	1676
ENSMUSG00000038957	protein_coding	Edc3	ENSMUST00000137245	nonsense_mediated_decay		9	1	57708555	4277
ENSMUSG00000041528	protein_coding	Rnf123	ENSMUST00000047746	protein_coding	alternative2	9	-1	108079301	4722
ENSMUSG00000027845	protein_coding	Dclre1b	ENSMUST00000128716	nonsense_mediated_decay		3	-1	103809192	532
ENSMUSG00000038957	protein_coding	Edc3	ENSMUST00000142807	protein_coding		9	1	57708567	443
ENSMUSG00000023972	protein_coding	Ptk7	ENSMUST00000044442	protein_coding	principal1	17	-1	46629504	4235
ENSMUSG00000026175	protein_coding	Vil1	ENSMUST00000161087	retained_intron		1	1	74421416	408
ENSMUSG00000027845	protein_coding	Dclre1b	ENSMUST00000106832	protein_coding		3	-1	103809389	2299
ENSMUSG00000113265	lincRNA	Gm30198	ENSMUST00000222873	lincRNA		12	1	102447328	824
ENSMUSG00000042688	protein_coding	Mapk6	ENSMUST00000173460	processed_transcript		9	-1	75409583	875
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000141941	processed_transcript		16	1	43363048	414
ENSMUSG00000042688	protein_coding	Mapk6	ENSMUST00000172665	processed_transcript		9	-1	75409985	471
ENSMUSG00000026175	protein_coding	Vil1	ENSMUST00000163018	retained_intron		1	1	74423686	658
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000139491	retained_intron		16	1	43363464	2063
ENSMUSG00000042688	protein_coding	Mapk6	ENSMUST00000168937	protein_coding	principal1	9	-1	75409359	4089
ENSMUSG00000026466	protein_coding	Tor1aip1	ENSMUST00000141878	protein_coding		1	-1	156034880	806
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000156367	protein_coding		16	1	43363873	787
ENSMUSG00000100514	processed_pseudogene	Gm12960	ENSMUST00000120017	processed_pseudogene		4	-1	111808423	1066
ENSMUSG00000026466	protein_coding	Tor1aip1	ENSMUST00000130995	nonsense_mediated_decay		1	-1	156036480	1600
ENSMUSG00000082686	processed_pseudogene	Gm12961	ENSMUST00000120507	processed_pseudogene		4	-1	111791670	1050
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000148775	protein_coding		16	1	43364204	590
ENSMUSG00000059003	protein_coding	Grin2a	ENSMUST00000199708	protein_coding	principal1	16	-1	9994923	14634
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000126100	protein_coding		16	1	43503614	463
ENSMUSG00000026466	protein_coding	Tor1aip1	ENSMUST00000124212	retained_intron		1	-1	156018619	658
ENSMUSG00000097021	lincRNA	4933433G15Rik	ENSMUST00000180574	lincRNA		9	1	75410184	1153
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000123047	protein_coding		16	1	43503622	439
ENSMUSG00000097021	lincRNA	4933433G15Rik	ENSMUST00000180533	lincRNA		9	1	75410184	1481
ENSMUSG00000059003	protein_coding	Grin2a	ENSMUST00000115835	protein_coding	principal1	16	-1	9994582	5023
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000156981	protein_coding		16	1	43503642	837
ENSMUSG00000026466	protein_coding	Tor1aip1	ENSMUST00000123705	nonsense_mediated_decay		1	-1	156036050	561
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000122875	processed_transcript		16	1	43503697	736
ENSMUSG00000020798	protein_coding	Spns3	ENSMUST00000155774	processed_transcript		11	-1	72502443	4019
ENSMUSG00000026466	protein_coding	Tor1aip1	ENSMUST00000141980	retained_intron		1	-1	156036147	784
ENSMUSG00000044150	protein_coding	Bclaf3	ENSMUST00000112464	protein_coding	principal2	X	1	159532668	3366
ENSMUSG00000059003	protein_coding	Grin2a	ENSMUST00000199267	processed_transcript		16	-1	9797333	602
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000162745	processed_transcript		16	1	43508157	267
ENSMUSG00000059003	protein_coding	Grin2a	ENSMUST00000156482	retained_intron		16	-1	9994270	1109
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000114690	protein_coding	alternative2	16	1	43508263	2759
ENSMUSG00000026466	protein_coding	Tor1aip1	ENSMUST00000169241	protein_coding	alternative2	1	-1	156034817	3716
ENSMUSG00000059003	protein_coding	Grin2a	ENSMUST00000197242	retained_intron		16	-1	9995560	3906
ENSMUSG00000059003	protein_coding	Grin2a	ENSMUST00000032331	protein_coding	principal1	16	-1	9992533	4395
ENSMUSG00000044150	protein_coding	Bclaf3	ENSMUST00000057180	protein_coding	alternative2	X	1	159532719	2513
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000114695	protein_coding	principal3	16	1	43510308	2977
ENSMUSG00000032316	protein_coding	Clk3	ENSMUST00000216095	retained_intron		9	-1	57765103	3924
ENSMUSG00000104397	lincRNA	Gm37958	ENSMUST00000193131	lincRNA		1	-1	34330307	430
ENSMUSG00000022708	protein_coding	Zbtb20	ENSMUST00000079441	protein_coding	principal3	16	1	43247284	3086
ENSMUSG00000102839	TEC	Gm37385	ENSMUST00000195223	TEC		1	1	34350775	387
ENSMUSG00000044150	protein_coding	Bclaf3	ENSMUST00000149054	processed_transcript		X	1	159566849	898
ENSMUSG00000044150	protein_coding	Bclaf3	ENSMUST00000144598	protein_coding		X	1	159526688	578
ENSMUSG00000101206	processed_pseudogene	Gm5266	ENSMUST00000187302	processed_pseudogene		1	1	34367371	1162
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000145731	protein_coding		2	1	156196466	453
ENSMUSG00000044150	protein_coding	Bclaf3	ENSMUST00000154694	retained_intron		X	1	159567538	630
ENSMUSG00000025894	protein_coding	Aasdhppt	ENSMUST00000051589	protein_coding	principal1	9	-1	4309467	2843
ENSMUSG00000044150	protein_coding	Bclaf3	ENSMUST00000131623	protein_coding		X	1	159541755	409
ENSMUSG00000042487	protein_coding	Leo1	ENSMUST00000213767	retained_intron		9	1	75441524	4569
ENSMUSG00000085499	antisense	Gm15713	ENSMUST00000155900	antisense		16	-1	43420196	1546
ENSMUSG00000082693	processed_pseudogene	Gm15190	ENSMUST00000120855	processed_pseudogene		X	-1	159585058	276
ENSMUSG00000101462	transcribed_processed_pseudogene	Gm3052	ENSMUST00000186409	transcribed_processed_pseudogene		1	-1	34415878	829
ENSMUSG00000101462	transcribed_processed_pseudogene	Gm3052	ENSMUST00000188254	processed_transcript		1	-1	34417986	2224
ENSMUSG00000056411	antisense	Gm12500	ENSMUST00000186471	antisense		3	1	108085584	2428
ENSMUSG00000056411	antisense	Gm12500	ENSMUST00000070502	antisense		3	1	108085976	2034
ENSMUSG00000053472	processed_pseudogene	Gm13534	ENSMUST00000121169	processed_pseudogene		2	1	58108060	513
ENSMUSG00000025894	protein_coding	Aasdhppt	ENSMUST00000212066	nonsense_mediated_decay		9	-1	4309469	2810
ENSMUSG00000025894	protein_coding	Aasdhppt	ENSMUST00000212897	nonsense_mediated_decay		9	-1	4309471	2519
ENSMUSG00000102336	lincRNA	Gm37233	ENSMUST00000192173	lincRNA		1	-1	34433264	6263
ENSMUSG00000116803	processed_pseudogene	Gm49558	ENSMUST00000231467	processed_pseudogene		16	1	81792216	775
ENSMUSG00000116954	processed_pseudogene	Gm5676	ENSMUST00000231902	processed_pseudogene		16	-1	81853193	2019
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000130976	nonsense_mediated_decay		X	-1	73911271	3123
ENSMUSG00000073418	protein_coding	C4b	ENSMUST00000173669	retained_intron		17	-1	34729265	749
ENSMUSG00000116909	TEC	Gm49559	ENSMUST00000231952	TEC		16	1	81871510	2226
ENSMUSG00000116678	processed_pseudogene	Pgk1-ps1	ENSMUST00000232535	processed_pseudogene		16	1	81908998	465
ENSMUSG00000022386	protein_coding	Trmu	ENSMUST00000162491	nonsense_mediated_decay		15	1	85879312	468
ENSMUSG00000116865	lincRNA	Gm49560	ENSMUST00000232129	lincRNA		16	-1	81931911	1064
ENSMUSG00000116937	lincRNA	Gm41480	ENSMUST00000232378	lincRNA		16	1	82172291	842
ENSMUSG00000116923	processed_pseudogene	Gm7559	ENSMUST00000231395	processed_pseudogene		16	1	82565208	730
ENSMUSG00000027442	protein_coding	Cst8	ENSMUST00000028931	protein_coding	principal1	2	1	148798785	768
ENSMUSG00000071475	processed_pseudogene	Rpl21-ps5	ENSMUST00000095940	processed_pseudogene		16	-1	83371733	480
ENSMUSG00000027442	protein_coding	Cst8	ENSMUST00000154737	processed_transcript		2	1	148798903	507
ENSMUSG00000027442	protein_coding	Cst8	ENSMUST00000109947	protein_coding	principal1	2	1	148798834	804
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000125871	protein_coding	principal4	13	-1	54688094	4292
ENSMUSG00000027831	protein_coding	Veph1	ENSMUST00000029419	protein_coding	principal1	3	-1	66296837	6431
ENSMUSG00000117024	unprocessed_pseudogene	Gm49831	ENSMUST00000233071	unprocessed_pseudogene		17	1	39436912	243
ENSMUSG00000042487	protein_coding	Leo1	ENSMUST00000048937	protein_coding	principal1	9	1	75441536	2180
ENSMUSG00000042487	protein_coding	Leo1	ENSMUST00000213248	retained_intron		9	1	75449080	777
ENSMUSG00000028614	protein_coding	Ndc1	ENSMUST00000139560	protein_coding	principal1	4	1	107367784	4584
ENSMUSG00000096345	protein_coding	Esp16	ENSMUST00000178037	protein_coding	principal1	17	1	39536142	1243
ENSMUSG00000025893	protein_coding	Kbtbd3	ENSMUST00000049648	protein_coding	principal1	9	1	4309833	2231
ENSMUSG00000116212	processed_pseudogene	Gm18979	ENSMUST00000229625	processed_pseudogene		15	1	91960740	1350
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000037401	protein_coding	principal1	2	1	156196642	5737
ENSMUSG00000027889	protein_coding	Ampd2	ENSMUST00000136712	retained_intron		3	-1	108085555	4288
ENSMUSG00000116093	processed_pseudogene	Gm3888	ENSMUST00000230077	processed_pseudogene		15	-1	92027598	1240
ENSMUSG00000025893	protein_coding	Kbtbd3	ENSMUST00000212221	protein_coding	principal1	9	1	4309835	2313
ENSMUSG00000116533	processed_pseudogene	Gm49561	ENSMUST00000232058	processed_pseudogene		16	1	83565527	377
ENSMUSG00000022386	protein_coding	Trmu	ENSMUST00000023019	protein_coding	principal1	15	1	85879320	1526
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000134644	retained_intron		2	-1	121355077	3438
ENSMUSG00000116745	lincRNA	Gm41481	ENSMUST00000231610	lincRNA		16	-1	84057384	330
ENSMUSG00000028614	protein_coding	Ndc1	ENSMUST00000030357	nonsense_mediated_decay		4	1	107367880	2354
ENSMUSG00000116680	processed_pseudogene	Gm49562	ENSMUST00000231505	processed_pseudogene		16	-1	84219687	403
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000142364	retained_intron		2	-1	121341985	1571
ENSMUSG00000022386	protein_coding	Trmu	ENSMUST00000160733	processed_transcript		15	1	85879381	314
ENSMUSG00000028614	protein_coding	Ndc1	ENSMUST00000149366	nonsense_mediated_decay		4	1	107367915	4320
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000150081	retained_intron		2	-1	121355311	2485
ENSMUSG00000116748	processed_pseudogene	Gm7295	ENSMUST00000231876	processed_pseudogene		16	1	84246311	1386
ENSMUSG00000028614	protein_coding	Ndc1	ENSMUST00000125342	nonsense_mediated_decay		4	1	107368052	598
ENSMUSG00000109032	transcribed_unprocessed_pseudogene	Gm7972	ENSMUST00000208453	processed_transcript		9	1	75468616	505
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000137087	nonsense_mediated_decay		2	-1	121348791	572
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000055131	protein_coding		4	1	137594207	5722
ENSMUSG00000028614	protein_coding	Ndc1	ENSMUST00000150800	processed_transcript		4	1	107381085	422
ENSMUSG00000022386	protein_coding	Trmu	ENSMUST00000162601	retained_intron		15	1	85879414	743
ENSMUSG00000027831	protein_coding	Veph1	ENSMUST00000107837	processed_transcript		3	-1	66136438	1410
ENSMUSG00000028614	protein_coding	Ndc1	ENSMUST00000132950	retained_intron		4	1	107381462	804
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000129276	retained_intron		2	-1	121355330	3311
ENSMUSG00000109032	transcribed_unprocessed_pseudogene	Gm7972	ENSMUST00000208434	transcribed_unprocessed_pseudogene		9	1	75472128	1137
ENSMUSG00000027831	protein_coding	Veph1	ENSMUST00000182815	retained_intron		3	-1	66296748	1302
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000131661	retained_intron		2	-1	121355075	1442
ENSMUSG00000041124	protein_coding	Msantd4	ENSMUST00000212075	protein_coding	principal1	9	1	4376562	2800
ENSMUSG00000022386	protein_coding	Trmu	ENSMUST00000162339	nonsense_mediated_decay		15	1	85885164	665
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000022573	protein_coding	principal1	14	1	74732297	1988
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000140764	retained_intron		2	-1	121355072	1214
ENSMUSG00000109032	transcribed_unprocessed_pseudogene	Gm7972	ENSMUST00000209180	processed_transcript		9	1	75482851	2184
ENSMUSG00000104189	TEC	Gm37822	ENSMUST00000192618	TEC		3	1	66086684	1109
ENSMUSG00000033526	protein_coding	Ppip5k1	ENSMUST00000134796	protein_coding		2	-1	121355284	541
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000152617	processed_transcript		2	1	156196734	5524
ENSMUSG00000022386	protein_coding	Trmu	ENSMUST00000161784	retained_intron		15	1	85892577	814
ENSMUSG00000041124	protein_coding	Msantd4	ENSMUST00000213011	retained_intron		9	1	4376569	1900
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000105840	protein_coding	principal1	4	1	137594140	5741
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000135796	retained_intron		2	1	156196754	702
ENSMUSG00000116666	processed_pseudogene	Gm49649	ENSMUST00000232463	processed_pseudogene		16	-1	68007361	400
ENSMUSG00000041124	protein_coding	Msantd4	ENSMUST00000047173	protein_coding	principal1	9	1	4383535	2731
ENSMUSG00000116711	processed_pseudogene	Gm18495	ENSMUST00000231431	processed_pseudogene		16	1	68051386	571
ENSMUSG00000022386	protein_coding	Trmu	ENSMUST00000162010	processed_transcript		15	1	85894207	774
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000132129	retained_intron		2	1	156196756	2896
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000105839	protein_coding		4	1	137594207	2071
ENSMUSG00000116907	lincRNA	4930553E22Rik	ENSMUST00000231366	lincRNA		16	1	84371143	539
ENSMUSG00000022386	protein_coding	Trmu	ENSMUST00000159362	retained_intron		15	1	85894751	869
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000153822	processed_transcript		2	1	156222880	605
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000105837	protein_coding		4	1	137618471	3036
ENSMUSG00000116638	processed_pseudogene	Gm49650	ENSMUST00000232077	processed_pseudogene		16	-1	68164855	397
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000177445	retained_intron		14	1	74732319	918
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000131479	processed_transcript		2	1	156263185	605
ENSMUSG00000022386	protein_coding	Trmu	ENSMUST00000159730	retained_intron		15	1	85894881	2077
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000147234	processed_transcript		2	1	156282631	377
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000176484	processed_transcript		14	1	74732321	759
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000153100	protein_coding		4	1	137593755	619
ENSMUSG00000114553	lincRNA	Gm7644	ENSMUST00000225011	lincRNA		14	1	30636160	1092
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000175712	protein_coding		14	1	74732357	445
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000132352	retained_intron		2	1	156293745	703
ENSMUSG00000116859	processed_pseudogene	Gm49651	ENSMUST00000231403	processed_pseudogene		16	1	68510935	235
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000147242	processed_transcript		2	1	156296029	368
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000105838	protein_coding		4	1	137594228	564
ENSMUSG00000116562	processed_pseudogene	Gm46542	ENSMUST00000231718	processed_pseudogene		16	1	68888346	250
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000176957	protein_coding		14	1	74732384	1117
ENSMUSG00000038116	protein_coding	Phf20	ENSMUST00000122814	processed_transcript		2	1	156296405	903
ENSMUSG00000022847	protein_coding	Thpo	ENSMUST00000115437	protein_coding	principal2	16	-1	20734511	2416
ENSMUSG00000116931	processed_pseudogene	Gm18496	ENSMUST00000232625	processed_pseudogene		16	1	68999446	663
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000177283	protein_coding		14	1	74735655	794
ENSMUSG00000104676	TEC	Gm42777	ENSMUST00000196026	TEC		3	-1	121758646	3603
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000138599	processed_transcript		4	1	137619728	542
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000154395	processed_transcript		4	1	137621159	619
ENSMUSG00000107073	lincRNA	4930428D20Rik	ENSMUST00000201886	lincRNA		16	-1	69800381	546
ENSMUSG00000079606	protein_coding	Fsip2l	ENSMUST00000114928	protein_coding	principal1	X	-1	48877713	2122
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000177181	protein_coding		14	1	74735967	835
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000141426	protein_coding		4	1	137633363	467
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000128065	protein_coding		4	1	137623371	624
ENSMUSG00000022847	protein_coding	Thpo	ENSMUST00000076422	protein_coding	principal2	16	-1	20730598	1558
ENSMUSG00000117165	processed_pseudogene	Gm49832	ENSMUST00000232791	processed_pseudogene		17	-1	39637144	177
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000131755	protein_coding		4	1	137633434	694
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000177137	protein_coding		14	1	74735967	853
ENSMUSG00000020798	protein_coding	Spns3	ENSMUST00000092940	protein_coding	principal1	11	-1	72550506	2080
ENSMUSG00000022847	protein_coding	Thpo	ENSMUST00000232217	protein_coding	alternative2	16	-1	20730627	1620
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000141628	protein_coding		4	1	137633838	837
ENSMUSG00000047766	protein_coding	Lrrc49	ENSMUST00000065603	protein_coding		9	-1	60688158	3017
ENSMUSG00000022847	protein_coding	Thpo	ENSMUST00000231826	protein_coding		16	-1	20730551	885
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000175887	protein_coding		14	1	74735967	809
ENSMUSG00000020798	protein_coding	Spns3	ENSMUST00000021154	protein_coding		11	-1	72550301	1804
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000153869	protein_coding		4	1	137644426	503
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000176188	retained_intron		14	1	74738443	628
ENSMUSG00000021996	protein_coding	Esd	ENSMUST00000176726	protein_coding		14	1	74738506	347
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000157012	protein_coding		4	1	137650301	468
ENSMUSG00000095104	protein_coding	Esp15	ENSMUST00000178929	protein_coding	principal1	17	1	39640954	1171
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000151807	protein_coding		4	1	137644341	489
ENSMUSG00000047766	protein_coding	Lrrc49	ENSMUST00000128877	retained_intron		9	-1	60687903	1688
ENSMUSG00000081526	processed_pseudogene	Gm7219	ENSMUST00000119619	processed_pseudogene		X	-1	48890175	297
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000125151	processed_transcript		4	1	137657395	540
ENSMUSG00000117319	unprocessed_pseudogene	Gm49833	ENSMUST00000233822	unprocessed_pseudogene		17	-1	39812022	237
ENSMUSG00000047766	protein_coding	Lrrc49	ENSMUST00000114034	protein_coding	principal1	9	-1	60688118	2779
ENSMUSG00000063163	protein_coding	Speer2	ENSMUST00000076500	protein_coding	principal1	16	-1	69863744	1118
ENSMUSG00000106106	rRNA	CT010467.1	ENSMUST00000198477	rRNA		17	1	39846353	1849
ENSMUSG00000024979	protein_coding	Tectb	ENSMUST00000154886	protein_coding		19	1	55180733	758
ENSMUSG00000063163	protein_coding	Speer2	ENSMUST00000166256	protein_coding		16	-1	69860486	278
ENSMUSG00000043411	protein_coding	Usp48	ENSMUST00000152985	processed_transcript		4	1	137625163	3392
ENSMUSG00000027254	protein_coding	Map1a	ENSMUST00000094639	protein_coding	principal3	2	1	121289600	11825
ENSMUSG00000114849	lincRNA	Gm48595	ENSMUST00000224543	lincRNA		14	-1	11520770	451
ENSMUSG00000063163	protein_coding	Speer2	ENSMUST00000164146	retained_intron		16	-1	69861724	448
ENSMUSG00000047766	protein_coding	Lrrc49	ENSMUST00000114032	protein_coding		9	-1	60687534	2586
ENSMUSG00000027254	protein_coding	Map1a	ENSMUST00000131901	processed_transcript		2	1	121289770	457
ENSMUSG00000047766	protein_coding	Lrrc49	ENSMUST00000053171	protein_coding		9	-1	60649801	3086
ENSMUSG00000022564	protein_coding	Grina	ENSMUST00000229772	protein_coding		15	1	76246764	444
ENSMUSG00000047766	protein_coding	Lrrc49	ENSMUST00000132366	protein_coding		9	-1	60687672	600
ENSMUSG00000032590	protein_coding	Apeh	ENSMUST00000081309	protein_coding		9	-1	108094441	2308
ENSMUSG00000047766	protein_coding	Lrrc49	ENSMUST00000150398	processed_transcript		9	-1	60649710	710
ENSMUSG00000047766	protein_coding	Lrrc49	ENSMUST00000136388	retained_intron		9	-1	60598589	728
ENSMUSG00000035234	protein_coding	Abraxas1	ENSMUST00000153302	nonsense_mediated_decay		5	-1	100820940	1582
ENSMUSG00000047766	protein_coding	Lrrc49	ENSMUST00000166168	protein_coding		9	-1	60687534	2784
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000166384	protein_coding	principal1	1	1	9798107	3706
ENSMUSG00000032316	protein_coding	Clk3	ENSMUST00000065330	protein_coding	principal1	9	-1	57765860	2496
ENSMUSG00000032590	protein_coding	Apeh	ENSMUST00000193254	protein_coding	principal1	9	-1	108094606	2518
ENSMUSG00000026500	protein_coding	Cox20	ENSMUST00000027781	protein_coding	principal1	1	1	178319130	471
ENSMUSG00000022564	protein_coding	Grina	ENSMUST00000230347	protein_coding		15	1	76246770	616
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000188028	protein_coding	principal4	1	1	135836354	1200
ENSMUSG00000032316	protein_coding	Clk3	ENSMUST00000215233	protein_coding		9	-1	57765114	2363
ENSMUSG00000024979	protein_coding	Tectb	ENSMUST00000120936	protein_coding		19	1	55180736	1349
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000191055	retained_intron		1	1	135836390	3330
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000106402	protein_coding		3	1	126596951	4180
ENSMUSG00000032590	protein_coding	Apeh	ENSMUST00000192916	retained_intron		9	-1	108086028	532
ENSMUSG00000026500	protein_coding	Cox20	ENSMUST00000154437	retained_intron		1	1	178319130	670
ENSMUSG00000032316	protein_coding	Clk3	ENSMUST00000215109	retained_intron		9	-1	57765121	4130
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000186225	retained_intron		1	1	135836390	2961
ENSMUSG00000032316	protein_coding	Clk3	ENSMUST00000215333	protein_coding		9	-1	57755321	789
ENSMUSG00000058587	protein_coding	Tmod3	ENSMUST00000072232	protein_coding	principal1	9	-1	75559657	3667
ENSMUSG00000024979	protein_coding	Tectb	ENSMUST00000025936	protein_coding	principal1	19	1	55180885	2725
ENSMUSG00000032316	protein_coding	Clk3	ENSMUST00000213417	retained_intron		9	-1	57753461	389
ENSMUSG00000027254	protein_coding	Map1a	ENSMUST00000110639	protein_coding	alternative2	2	1	121295454	10145
ENSMUSG00000049536	protein_coding	Tceal1	ENSMUST00000055104	protein_coding	principal1	X	1	136707982	2803
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000190451	protein_coding		1	1	135836402	433
ENSMUSG00000058587	protein_coding	Tmod3	ENSMUST00000214424	processed_transcript		9	-1	75503064	922
ENSMUSG00000024979	protein_coding	Tectb	ENSMUST00000124545	protein_coding		19	1	55189578	531
ENSMUSG00000058587	protein_coding	Tmod3	ENSMUST00000214733	retained_intron		9	-1	75506183	2990
ENSMUSG00000039630	protein_coding	Hnrnpu	ENSMUST00000159117	processed_transcript		1	-1	178324171	2640
ENSMUSG00000115014	processed_pseudogene	Gm49061	ENSMUST00000227400	processed_pseudogene		14	-1	86216430	432
ENSMUSG00000058587	protein_coding	Tmod3	ENSMUST00000214171	protein_coding		9	-1	75541707	444
ENSMUSG00000027254	protein_coding	Map1a	ENSMUST00000133283	processed_transcript		2	1	121295463	411
ENSMUSG00000024979	protein_coding	Tectb	ENSMUST00000123763	retained_intron		19	1	55189630	573
ENSMUSG00000032316	protein_coding	Clk3	ENSMUST00000217409	nonsense_mediated_decay		9	-1	57765189	764
ENSMUSG00000115128	processed_pseudogene	Gm49062	ENSMUST00000226552	processed_pseudogene		14	-1	86229801	190
ENSMUSG00000058587	protein_coding	Tmod3	ENSMUST00000215821	protein_coding		9	-1	75559594	898
ENSMUSG00000032316	protein_coding	Clk3	ENSMUST00000216192	retained_intron		9	-1	57764308	2755
ENSMUSG00000024979	protein_coding	Tectb	ENSMUST00000148123	processed_transcript		19	1	55192033	2280
ENSMUSG00000026127	protein_coding	Imp4	ENSMUST00000027303	protein_coding	principal1	1	1	34439851	5836
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000220295	retained_intron		10	-1	127185326	1718
ENSMUSG00000058587	protein_coding	Tmod3	ENSMUST00000217459	retained_intron		9	-1	75559657	3918
ENSMUSG00000032316	protein_coding	Clk3	ENSMUST00000215158	protein_coding		9	-1	57764853	576
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000106399	protein_coding		3	1	126596960	4169
ENSMUSG00000111228	processed_pseudogene	Gm48789	ENSMUST00000215151	processed_pseudogene		9	-1	75520502	129
ENSMUSG00000106704	processed_pseudogene	Gm42799	ENSMUST00000201331	processed_pseudogene		5	1	75246443	328
ENSMUSG00000082543	processed_pseudogene	Gm14336	ENSMUST00000117491	processed_pseudogene		2	-1	173920826	475
ENSMUSG00000106689	processed_pseudogene	Gm18345	ENSMUST00000200710	processed_pseudogene		5	1	75342443	1390
ENSMUSG00000115271	lincRNA	4930529K09Rik	ENSMUST00000227144	lincRNA		14	1	86245970	622
ENSMUSG00000000881	protein_coding	Dlg3	ENSMUST00000000901	protein_coding	principal1	X	1	100767722	4885
ENSMUSG00000026127	protein_coding	Imp4	ENSMUST00000187077	retained_intron		1	1	34439898	2672
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000189732	protein_coding	alternative2	1	1	135836410	1123
ENSMUSG00000081700	processed_pseudogene	Atp5k-ps2	ENSMUST00000120437	processed_pseudogene		2	-1	173984691	210
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000066466	protein_coding		3	1	126596998	4075
ENSMUSG00000115271	lincRNA	4930529K09Rik	ENSMUST00000228468	lincRNA		14	1	86246003	1145
ENSMUSG00000022564	protein_coding	Grina	ENSMUST00000023225	protein_coding	principal1	15	1	76246775	1725
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000028608	protein_coding	principal1	2	-1	103761270	3879
ENSMUSG00000115176	processed_pseudogene	Gm49063	ENSMUST00000228381	processed_pseudogene		14	1	86290707	514
ENSMUSG00000107386	lincRNA	Gm42800	ENSMUST00000202494	lincRNA		5	-1	75399372	733
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000189355	protein_coding	alternative2	1	1	135836413	1112
ENSMUSG00000082519	processed_pseudogene	Vamp7-ps	ENSMUST00000120334	processed_pseudogene		2	-1	174047273	655
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000163226	protein_coding		3	1	126597005	4204
ENSMUSG00000115777	processed_transcript	Gm32815	ENSMUST00000228609	processed_transcript		14	-1	86299734	1928
ENSMUSG00000032590	protein_coding	Apeh	ENSMUST00000194915	retained_intron		9	-1	108094466	2517
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000189826	protein_coding		1	1	135840699	796
ENSMUSG00000022564	protein_coding	Grina	ENSMUST00000229380	protein_coding		15	1	76246830	373
ENSMUSG00000115089	processed_pseudogene	Gm4350	ENSMUST00000226132	processed_pseudogene		14	1	86320285	579
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000219649	retained_intron		10	-1	127190036	2571
ENSMUSG00000032590	protein_coding	Apeh	ENSMUST00000194014	retained_intron		9	-1	108086468	376
ENSMUSG00000115494	lincRNA	Gm49293	ENSMUST00000226943	lincRNA		14	-1	72738313	1205
ENSMUSG00000032590	protein_coding	Apeh	ENSMUST00000191754	retained_intron		9	-1	108088520	835
ENSMUSG00000115664	lincRNA	Gm32913	ENSMUST00000228199	lincRNA		14	-1	86409099	1094
ENSMUSG00000115664	lincRNA	Gm32913	ENSMUST00000226187	lincRNA		14	-1	86409099	1903
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000112087	protein_coding	alternative2	1	1	135840857	1112
ENSMUSG00000022564	protein_coding	Grina	ENSMUST00000229916	retained_intron		15	1	76248064	854
ENSMUSG00000115401	processed_pseudogene	Gm49157	ENSMUST00000226392	processed_pseudogene		14	-1	86503575	130
ENSMUSG00000115532	lincRNA	Gm41206	ENSMUST00000227565	lincRNA		14	1	72789353	1537
ENSMUSG00000117201	processed_pseudogene	Gm49834	ENSMUST00000233556	processed_pseudogene		17	1	39920516	219
ENSMUSG00000115776	processed_pseudogene	Gm49158	ENSMUST00000228733	processed_pseudogene		14	-1	86512071	457
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000188098	retained_intron		1	1	135849450	292
ENSMUSG00000029125	protein_coding	Stx18	ENSMUST00000114126	protein_coding	principal1	5	1	38038742	3002
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000037422	protein_coding	alternative1	13	-1	54693847	3734
ENSMUSG00000115611	transcribed_processed_pseudogene	Gm4606	ENSMUST00000226844	processed_transcript		14	-1	72863555	1024
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000188782	nonsense_mediated_decay		1	1	9798143	3762
ENSMUSG00000026127	protein_coding	Imp4	ENSMUST00000137794	nonsense_mediated_decay		1	1	34439905	658
ENSMUSG00000115611	transcribed_processed_pseudogene	Gm4606	ENSMUST00000228906	transcribed_processed_pseudogene		14	-1	72841244	523
ENSMUSG00000095886	protein_coding	Esp38	ENSMUST00000232743	protein_coding	alternative2	17	1	39950520	375
ENSMUSG00000032590	protein_coding	Apeh	ENSMUST00000194083	retained_intron		9	-1	108094476	4197
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000134862	protein_coding	alternative1	13	-1	54693907	3797
ENSMUSG00000095886	protein_coding	Esp38	ENSMUST00000178880	protein_coding	principal2	17	1	39953353	243
ENSMUSG00000029125	protein_coding	Stx18	ENSMUST00000031008	protein_coding		5	1	38039233	1471
ENSMUSG00000032590	protein_coding	Apeh	ENSMUST00000192278	retained_intron		9	-1	108094020	803
ENSMUSG00000026127	protein_coding	Imp4	ENSMUST00000149962	nonsense_mediated_decay		1	1	34439905	997
ENSMUSG00000030562	protein_coding	Nox4	ENSMUST00000032781	protein_coding	principal2	7	1	87246649	3753
ENSMUSG00000032590	protein_coding	Apeh	ENSMUST00000191985	protein_coding		9	-1	108094479	645
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000178854	protein_coding	alternative2	1	1	135840875	1076
ENSMUSG00000029125	protein_coding	Stx18	ENSMUST00000042146	protein_coding		5	1	38039251	1473
ENSMUSG00000117136	protein_coding	Gm49835	ENSMUST00000232764	protein_coding	principal1	17	1	40095450	1266
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000027671	protein_coding	alternative2	1	1	135840875	1064
ENSMUSG00000070643	protein_coding	Sox13	ENSMUST00000144386	protein_coding	alternative2	1	-1	133393218	3179
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000179863	protein_coding	principal4	1	1	135840875	1097
ENSMUSG00000026127	protein_coding	Imp4	ENSMUST00000134327	processed_transcript		1	1	34439937	726
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000168907	protein_coding	principal1	1	1	9798143	3779
ENSMUSG00000029125	protein_coding	Stx18	ENSMUST00000202412	protein_coding		5	1	38039282	457
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000150806	protein_coding	alternative1	13	-1	54688188	3772
ENSMUSG00000026127	protein_coding	Imp4	ENSMUST00000128086	processed_transcript		1	1	34439953	470
ENSMUSG00000029125	protein_coding	Stx18	ENSMUST00000154929	protein_coding		5	1	38039283	900
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000038868	protein_coding	principal2	4	1	111719984	2466
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000199300	protein_coding	principal3	3	1	126597007	5524
ENSMUSG00000081399	processed_pseudogene	Gm14921	ENSMUST00000118643	processed_pseudogene		X	-1	112661428	908
ENSMUSG00000026127	protein_coding	Imp4	ENSMUST00000136770	nonsense_mediated_decay		1	1	34440041	762
ENSMUSG00000000881	protein_coding	Dlg3	ENSMUST00000113736	protein_coding		X	1	100767723	4940
ENSMUSG00000070643	protein_coding	Sox13	ENSMUST00000153799	protein_coding	principal2	1	-1	133424377	3693
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000128257	protein_coding	alternative1	13	-1	54688259	1689
ENSMUSG00000026127	protein_coding	Imp4	ENSMUST00000191000	processed_transcript		1	1	34448247	365
ENSMUSG00000029125	protein_coding	Stx18	ENSMUST00000146864	protein_coding		5	1	38076557	683
ENSMUSG00000070643	protein_coding	Sox13	ENSMUST00000145922	retained_intron		1	-1	133385526	757
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000112085	protein_coding	alternative2	1	1	135840875	1076
ENSMUSG00000055022	protein_coding	Cntn1	ENSMUST00000141187	retained_intron		15	1	92051165	4524
ENSMUSG00000101711	antisense	Gm28306	ENSMUST00000191315	antisense		1	-1	34444730	529
ENSMUSG00000029125	protein_coding	Stx18	ENSMUST00000201285	processed_transcript		5	1	38111042	601
ENSMUSG00000073418	protein_coding	C4b	ENSMUST00000069507	protein_coding	principal1	17	-1	34743882	5379
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000145215	retained_intron		13	-1	54684072	758
ENSMUSG00000070643	protein_coding	Sox13	ENSMUST00000126530	retained_intron		1	-1	133386434	628
ENSMUSG00000070643	protein_coding	Sox13	ENSMUST00000094551	protein_coding	principal2	1	-1	133393270	1842
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000126717	protein_coding		13	-1	54693846	792
ENSMUSG00000029125	protein_coding	Stx18	ENSMUST00000147667	retained_intron		5	1	38120909	506
ENSMUSG00000029125	protein_coding	Stx18	ENSMUST00000141286	retained_intron		5	1	38134395	1081
ENSMUSG00000073418	protein_coding	C4b	ENSMUST00000173057	nonsense_mediated_decay		17	-1	34736099	763
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000129881	protein_coding		13	-1	54687654	698
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000148319	retained_intron		X	-1	73911271	3145
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000178204	protein_coding	alternative2	1	1	135836386	1172
ENSMUSG00000036924	protein_coding	Cst13	ENSMUST00000046589	protein_coding	principal1	2	1	148820081	783
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000128038	retained_intron		13	-1	54684407	725
ENSMUSG00000000881	protein_coding	Dlg3	ENSMUST00000087984	protein_coding		X	1	100767749	4956
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000125927	protein_coding		13	-1	54688200	664
ENSMUSG00000026414	protein_coding	Tnnt2	ENSMUST00000112086	protein_coding	alternative2	1	1	135840875	1094
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000122935	protein_coding		13	-1	54688257	671
ENSMUSG00000045842	transcribed_processed_pseudogene	Tgif2-ps2	ENSMUST00000061746	transcribed_processed_pseudogene		17	1	40115358	711
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000147510	retained_intron		X	-1	73911271	2806
ENSMUSG00000042111	protein_coding	Ccdc115	ENSMUST00000042493	protein_coding	principal1	1	-1	34439672	1705
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000127163	retained_intron		X	-1	73911271	2580
ENSMUSG00000045842	transcribed_processed_pseudogene	Tgif2-ps2	ENSMUST00000233313	processed_transcript		17	1	40115475	735
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000151600	retained_intron		X	-1	73911271	2803
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000134177	protein_coding		13	-1	54688274	386
ENSMUSG00000117125	unprocessed_pseudogene	Gm49836	ENSMUST00000233501	unprocessed_pseudogene		17	1	40129159	243
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000149311	retained_intron		3	1	126597009	2328
ENSMUSG00000042111	protein_coding	Ccdc115	ENSMUST00000188583	retained_intron		1	-1	34438696	1903
ENSMUSG00000117307	processed_pseudogene	Gm49837	ENSMUST00000232831	processed_pseudogene		17	1	40187675	219
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000114407	protein_coding	alternative2	X	-1	73911271	3051
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000145397	protein_coding		13	-1	54693812	609
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000188625	retained_intron		1	1	9798158	3415
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000188738	nonsense_mediated_decay		1	1	9798185	2803
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000145159	retained_intron		X	-1	73911271	3208
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000140393	nonsense_mediated_decay		X	-1	73911271	2690
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000146931	protein_coding		13	-1	54687808	550
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000188298	nonsense_mediated_decay		1	1	9798208	3099
ENSMUSG00000035234	protein_coding	Abraxas1	ENSMUST00000200657	nonsense_mediated_decay		5	-1	100820940	1668
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000123333	processed_transcript		13	-1	54687253	373
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000144052	processed_transcript		13	-1	54693850	322
ENSMUSG00000035234	protein_coding	Abraxas1	ENSMUST00000044535	nonsense_mediated_decay		5	-1	100820943	2182
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000150626	protein_coding		13	-1	54688273	354
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000171265	protein_coding	principal1	1	1	9848272	3680
ENSMUSG00000027445	protein_coding	Cst9	ENSMUST00000028935	protein_coding	principal1	2	1	148835147	687
ENSMUSG00000034928	protein_coding	Rnf44	ENSMUST00000177950	protein_coding	alternative1	13	-1	54687808	3941
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000114404	protein_coding		X	-1	73911229	2895
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000188830	processed_transcript		1	1	9848321	452
ENSMUSG00000035234	protein_coding	Abraxas1	ENSMUST00000055245	protein_coding	principal1	5	-1	100820965	2139
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000189050	retained_intron		1	1	9848321	737
ENSMUSG00000027889	protein_coding	Ampd2	ENSMUST00000102638	protein_coding	principal1	3	-1	108086627	3650
ENSMUSG00000000881	protein_coding	Dlg3	ENSMUST00000147863	retained_intron		X	1	100767995	5017
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000142925	processed_transcript		X	-1	73897426	527
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000143696	protein_coding		X	-1	73898066	597
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000149774	protein_coding		X	-1	73899626	823
ENSMUSG00000035234	protein_coding	Abraxas1	ENSMUST00000145429	retained_intron		5	-1	100807326	701
ENSMUSG00000035234	protein_coding	Abraxas1	ENSMUST00000129358	nonsense_mediated_decay		5	-1	100820941	545
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000097826	protein_coding	principal1	1	1	9848397	2728
ENSMUSG00000031233	protein_coding	Pgk2	ENSMUST00000033585	protein_coding	principal1	17	-1	40208640	1626
ENSMUSG00000030562	protein_coding	Nox4	ENSMUST00000126887	nonsense_mediated_decay		7	1	87246649	3749
ENSMUSG00000000881	protein_coding	Dlg3	ENSMUST00000113735	protein_coding		X	1	100774741	3692
ENSMUSG00000029126	protein_coding	Nsg1	ENSMUST00000031009	protein_coding	principal1	5	-1	38159907	2581
ENSMUSG00000035234	protein_coding	Abraxas1	ENSMUST00000145707	retained_intron		5	-1	100820947	454
ENSMUSG00000035234	protein_coding	Abraxas1	ENSMUST00000131857	retained_intron		5	-1	100820940	358
ENSMUSG00000030562	protein_coding	Nox4	ENSMUST00000136577	nonsense_mediated_decay		7	1	87246795	1888
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000128329	retained_intron		X	-1	73921870	2367
ENSMUSG00000035234	protein_coding	Abraxas1	ENSMUST00000117364	protein_coding	principal1	5	-1	100820940	1657
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000191338	retained_intron		1	1	9883467	3595
ENSMUSG00000030562	protein_coding	Nox4	ENSMUST00000068829	protein_coding	alternative2	7	1	87246795	1861
ENSMUSG00000000881	protein_coding	Dlg3	ENSMUST00000151020	processed_transcript		X	1	100777285	3316
ENSMUSG00000029126	protein_coding	Nsg1	ENSMUST00000202129	protein_coding		5	-1	38138829	533
ENSMUSG00000025915	protein_coding	Sgk3	ENSMUST00000188486	retained_intron		1	1	9895427	3748
ENSMUSG00000105607	TEC	Gm43513	ENSMUST00000199779	TEC		5	-1	100815285	1076
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000143536	processed_transcript		X	-1	73900738	1196
ENSMUSG00000029126	protein_coding	Nsg1	ENSMUST00000201415	protein_coding		5	-1	38159031	883
ENSMUSG00000000881	protein_coding	Dlg3	ENSMUST00000148076	processed_transcript		X	1	100796577	326
ENSMUSG00000027889	protein_coding	Ampd2	ENSMUST00000102637	protein_coding	principal1	3	-1	108086651	3586
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000124798	protein_coding		X	-1	73905656	642
ENSMUSG00000030562	protein_coding	Nox4	ENSMUST00000144267	nonsense_mediated_decay		7	1	87246812	3333
ENSMUSG00000046334	processed_pseudogene	Gm6195	ENSMUST00000063059	processed_pseudogene		1	-1	9802553	357
ENSMUSG00000000881	protein_coding	Dlg3	ENSMUST00000146772	processed_transcript		X	1	100808000	559
ENSMUSG00000018595	protein_coding	Glra4	ENSMUST00000018739	protein_coding	principal1	X	-1	136780141	1831
ENSMUSG00000029126	protein_coding	Nsg1	ENSMUST00000201363	protein_coding	principal1	5	-1	38159405	820
ENSMUSG00000105755	sense_intronic	Gm43514	ENSMUST00000198852	sense_intronic		5	-1	100820753	424
ENSMUSG00000117598	lincRNA	Gm50028	ENSMUST00000234248	lincRNA		17	-1	76339195	273
ENSMUSG00000032589	protein_coding	Bsn	ENSMUST00000035208	protein_coding	principal1	9	-1	108190384	15938
ENSMUSG00000029126	protein_coding	Nsg1	ENSMUST00000201341	protein_coding		5	-1	38159362	709
ENSMUSG00000027889	protein_coding	Ampd2	ENSMUST00000078912	protein_coding		3	-1	108085399	3368
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000122820	processed_transcript		4	1	111720010	2415
ENSMUSG00000032589	protein_coding	Bsn	ENSMUST00000124763	protein_coding		9	-1	108110413	7496
ENSMUSG00000018595	protein_coding	Glra4	ENSMUST00000154833	retained_intron		X	-1	136780141	1547
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000149135	processed_transcript		X	-1	73911298	563
ENSMUSG00000029126	protein_coding	Nsg1	ENSMUST00000202831	retained_intron		5	-1	38159473	630
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000153746	protein_coding		4	1	111720038	1444
ENSMUSG00000027889	protein_coding	Ampd2	ENSMUST00000106667	retained_intron		3	-1	108075470	600
ENSMUSG00000027446	protein_coding	Cstdc2	ENSMUST00000028937	protein_coding	principal1	2	-1	148850934	661
ENSMUSG00000031935	protein_coding	Med17	ENSMUST00000034411	protein_coding	principal1	9	-1	15279931	3964
ENSMUSG00000027889	protein_coding	Ampd2	ENSMUST00000127232	retained_intron		3	-1	108076432	537
ENSMUSG00000029126	protein_coding	Nsg1	ENSMUST00000201134	protein_coding		5	-1	38159405	416
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000084354	protein_coding	alternative1	4	1	111720205	2239
ENSMUSG00000031389	protein_coding	Arhgap4	ENSMUST00000123283	nonsense_mediated_decay		X	-1	73911293	555
ENSMUSG00000027889	protein_coding	Ampd2	ENSMUST00000125467	retained_intron		3	-1	108077895	767
ENSMUSG00000107276	TEC	Gm42858	ENSMUST00000202512	TEC		5	-1	38136097	1704
ENSMUSG00000034607	protein_coding	Pof1b	ENSMUST00000039887	protein_coding	principal1	X	-1	112698651	3886
ENSMUSG00000031935	protein_coding	Med17	ENSMUST00000213788	protein_coding		9	-1	15270452	820
ENSMUSG00000027446	protein_coding	Cstdc2	ENSMUST00000149457	processed_transcript		2	-1	148865038	444
ENSMUSG00000027889	protein_coding	Ampd2	ENSMUST00000149479	retained_intron		3	-1	108079709	697
ENSMUSG00000006958	protein_coding	Chrd	ENSMUST00000115423	protein_coding		16	1	20733127	2417
ENSMUSG00000031935	protein_coding	Med17	ENSMUST00000213356	retained_intron		9	-1	15272870	735
ENSMUSG00000027889	protein_coding	Ampd2	ENSMUST00000133129	retained_intron		3	-1	108080618	1321
ENSMUSG00000031935	protein_coding	Med17	ENSMUST00000216406	protein_coding		9	-1	15279903	743
ENSMUSG00000115475	processed_pseudogene	Gm49295	ENSMUST00000228487	processed_pseudogene		14	1	72902159	478
ENSMUSG00000027889	protein_coding	Ampd2	ENSMUST00000153626	retained_intron		3	-1	108085395	1041
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000141412	nonsense_mediated_decay		1	1	74542888	4682
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000143879	processed_transcript		4	1	111777558	1857
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000070513	protein_coding		4	1	111720009	478
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000140366	processed_transcript		4	1	111720059	546
ENSMUSG00000060445	protein_coding	Sycp2	ENSMUST00000081134	protein_coding	principal1	2	-1	178407685	5717
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000156179	processed_transcript		4	1	111720063	455
ENSMUSG00000087368	processed_transcript	BC065397	ENSMUST00000134066	processed_transcript		X	1	136742976	3201
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000123718	processed_transcript		4	1	111720129	600
ENSMUSG00000111301	processed_pseudogene	Gm30671	ENSMUST00000214898	processed_pseudogene		9	-1	44610722	318
ENSMUSG00000087368	processed_transcript	BC065397	ENSMUST00000145620	processed_transcript		X	1	136765607	768
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000125999	processed_transcript		4	1	111777597	791
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000113745	retained_intron		1	1	74542903	1749
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000137072	processed_transcript		4	1	111805861	232
ENSMUSG00000111264	TEC	E030022I16Rik	ENSMUST00000215131	TEC		9	1	44618253	2766
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000132802	processed_transcript		4	1	111822263	587
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000134000	processed_transcript		4	1	111720103	1138
ENSMUSG00000034645	protein_coding	Zyg11a	ENSMUST00000223127	protein_coding	alternative2	4	-1	108217922	2283
ENSMUSG00000034401	protein_coding	Spata6	ENSMUST00000149834	processed_transcript		4	1	111774799	790
ENSMUSG00000060445	protein_coding	Sycp2	ENSMUST00000132611	processed_transcript		2	-1	178374930	2618
ENSMUSG00000034645	protein_coding	Zyg11a	ENSMUST00000106690	protein_coding	alternative2	4	-1	108218048	2421
ENSMUSG00000060445	protein_coding	Sycp2	ENSMUST00000132765	retained_intron		2	-1	178375270	782
ENSMUSG00000087368	processed_transcript	BC065397	ENSMUST00000134672	processed_transcript		X	1	136741846	894
ENSMUSG00000109632	lincRNA	Gm31479	ENSMUST00000209936	lincRNA		7	1	45597140	522
ENSMUSG00000060445	protein_coding	Sycp2	ENSMUST00000138175	protein_coding		2	-1	178407422	614
ENSMUSG00000087368	processed_transcript	BC065397	ENSMUST00000146801	processed_transcript		X	1	136741824	697
ENSMUSG00000034645	protein_coding	Zyg11a	ENSMUST00000043793	protein_coding	principal2	4	-1	108217922	2289
ENSMUSG00000080788	processed_pseudogene	Gm7841	ENSMUST00000122108	processed_pseudogene		X	-1	134054415	1629
ENSMUSG00000049653	protein_coding	Spatc1	ENSMUST00000074173	protein_coding	principal1	15	1	76268089	1605
ENSMUSG00000087368	processed_transcript	BC065397	ENSMUST00000152379	processed_transcript		X	1	136741858	376
ENSMUSG00000116516	processed_pseudogene	Gm49444	ENSMUST00000230244	processed_pseudogene		15	-1	81656399	215
ENSMUSG00000087368	processed_transcript	BC065397	ENSMUST00000125022	processed_transcript		X	1	136741888	501
ENSMUSG00000087368	processed_transcript	BC065397	ENSMUST00000131947	processed_transcript		X	1	136743400	499
ENSMUSG00000049653	protein_coding	Spatc1	ENSMUST00000230221	nonsense_mediated_decay		15	1	76268122	1664
ENSMUSG00000115946	antisense	Mirt2	ENSMUST00000231521	antisense		15	-1	76269839	1297
ENSMUSG00000115946	antisense	Mirt2	ENSMUST00000231808	antisense		15	-1	76269729	1083
ENSMUSG00000072066	protein_coding	6720489N17Rik	ENSMUST00000201563	protein_coding	principal2	13	-1	62624182	2640
ENSMUSG00000115946	antisense	Mirt2	ENSMUST00000230866	antisense		15	-1	76268426	968
ENSMUSG00000072066	protein_coding	6720489N17Rik	ENSMUST00000223338	protein_coding	alternative2	13	-1	62624180	1457
ENSMUSG00000072066	protein_coding	6720489N17Rik	ENSMUST00000091563	protein_coding		13	-1	62607499	318
ENSMUSG00000092522	antisense	Gm20389	ENSMUST00000174217	antisense		3	-1	154711343	1006
ENSMUSG00000030827	protein_coding	Fgf21	ENSMUST00000033099	protein_coding	principal1	7	-1	45615490	951
ENSMUSG00000115946	antisense	Mirt2	ENSMUST00000232408	antisense		15	-1	76268267	729
ENSMUSG00000114172	processed_pseudogene	Gm36298	ENSMUST00000223394	processed_pseudogene		13	-1	62643252	1732
ENSMUSG00000113473	processed_pseudogene	Gm7045	ENSMUST00000221466	processed_pseudogene		13	-1	62670903	605
ENSMUSG00000055172	protein_coding	C1ra	ENSMUST00000068593	protein_coding	principal1	6	1	124512405	2981
ENSMUSG00000039630	protein_coding	Hnrnpu	ENSMUST00000161769	nonsense_mediated_decay		1	-1	178337728	2844
ENSMUSG00000039630	protein_coding	Hnrnpu	ENSMUST00000188044	nonsense_mediated_decay		1	-1	178330621	511
ENSMUSG00000006958	protein_coding	Chrd	ENSMUST00000007171	protein_coding	principal2	16	1	20733127	3275
ENSMUSG00000039630	protein_coding	Hnrnpu	ENSMUST00000189450	nonsense_mediated_decay		1	-1	178329407	351
ENSMUSG00000005813	protein_coding	Metap1	ENSMUST00000029804	protein_coding	principal1	3	-1	138489515	2686
ENSMUSG00000005813	protein_coding	Metap1	ENSMUST00000198700	protein_coding		3	-1	138468954	1007
ENSMUSG00000003546	protein_coding	Klc4	ENSMUST00000233974	protein_coding	principal1	17	-1	46646022	2313
ENSMUSG00000025433	protein_coding	Crisp3	ENSMUST00000026499	protein_coding	principal1	17	-1	40242288	1417
ENSMUSG00000003546	protein_coding	Klc4	ENSMUST00000003642	protein_coding	principal1	17	-1	46645144	2322
ENSMUSG00000078161	protein_coding	Erich3	ENSMUST00000098496	protein_coding	alternative2	3	1	154663859	8280
ENSMUSG00000005813	protein_coding	Metap1	ENSMUST00000200365	retained_intron		3	-1	138475185	731
ENSMUSG00000039630	protein_coding	Hnrnpu	ENSMUST00000037748	protein_coding	principal1	1	-1	178337797	7640
ENSMUSG00000005813	protein_coding	Metap1	ENSMUST00000195910	retained_intron		3	-1	138475273	681
ENSMUSG00000032097	protein_coding	Ddx6	ENSMUST00000217034	protein_coding	principal1	9	1	44604896	6029
ENSMUSG00000005813	protein_coding	Metap1	ENSMUST00000199303	processed_transcript		3	-1	138481784	763
ENSMUSG00000078161	protein_coding	Erich3	ENSMUST00000051862	protein_coding	principal2	3	1	154711108	2034
ENSMUSG00000039630	protein_coding	Hnrnpu	ENSMUST00000162916	retained_intron		1	-1	178330320	710
ENSMUSG00000005813	protein_coding	Metap1	ENSMUST00000197531	protein_coding		3	-1	138489398	3708
ENSMUSG00000039630	protein_coding	Hnrnpu	ENSMUST00000150825	retained_intron		1	-1	178332926	923
ENSMUSG00000078161	protein_coding	Erich3	ENSMUST00000192912	processed_transcript		3	1	154711865	384
ENSMUSG00000005813	protein_coding	Metap1	ENSMUST00000198492	retained_intron		3	-1	138489368	716
ENSMUSG00000039630	protein_coding	Hnrnpu	ENSMUST00000146362	processed_transcript		1	-1	178334546	869
ENSMUSG00000032097	protein_coding	Ddx6	ENSMUST00000213697	retained_intron		9	1	44604897	3502
ENSMUSG00000117498	processed_pseudogene	Gm18366	ENSMUST00000234836	processed_pseudogene		17	-1	76821490	505
ENSMUSG00000078161	protein_coding	Erich3	ENSMUST00000189969	protein_coding		3	1	154764330	3460
ENSMUSG00000039630	protein_coding	Hnrnpu	ENSMUST00000134291	retained_intron		1	-1	178336405	673
ENSMUSG00000117388	processed_pseudogene	Gm6496	ENSMUST00000235006	processed_pseudogene		17	1	76936640	402
ENSMUSG00000032097	protein_coding	Ddx6	ENSMUST00000170489	protein_coding	principal1	9	1	44604892	6065
ENSMUSG00000103204	sense_overlapping	Gm38139	ENSMUST00000195806	sense_overlapping		3	1	154656701	704
ENSMUSG00000117578	processed_pseudogene	Rpsa-ps8	ENSMUST00000234215	processed_pseudogene		17	-1	77363210	858
ENSMUSG00000111030	TEC	Gm47234	ENSMUST00000217540	TEC		9	1	44634195	909
ENSMUSG00000093674	protein_coding	Rpl41	ENSMUST00000177163	protein_coding	principal2	10	-1	128549153	544
ENSMUSG00000091058	processed_pseudogene	Gm17538	ENSMUST00000168236	processed_pseudogene		17	-1	77674700	325
ENSMUSG00000117553	processed_pseudogene	Gm4711	ENSMUST00000234795	processed_pseudogene		17	-1	77687349	725
ENSMUSG00000003198	protein_coding	Zfp959	ENSMUST00000224379	protein_coding		17	1	55892093	895
ENSMUSG00000027447	protein_coding	Cst3	ENSMUST00000028938	protein_coding	principal1	2	-1	148875576	860
ENSMUSG00000093674	protein_coding	Rpl41	ENSMUST00000176683	protein_coding	principal2	10	-1	128549162	437
ENSMUSG00000049999	protein_coding	Ppp1r3d	ENSMUST00000058678	protein_coding	principal1	2	-1	178414472	3267
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000143017	retained_intron		2	-1	103761197	4107
ENSMUSG00000003198	protein_coding	Zfp959	ENSMUST00000054780	protein_coding	principal1	17	1	55892120	2028
ENSMUSG00000027447	protein_coding	Cst3	ENSMUST00000144845	protein_coding		2	-1	148875692	375
ENSMUSG00000003198	protein_coding	Zfp959	ENSMUST00000224294	retained_intron		17	1	55892468	705
ENSMUSG00000015134	protein_coding	Aldh1a3	ENSMUST00000015278	protein_coding	principal1	7	-1	66427517	3443
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000133016	retained_intron		2	-1	103761241	4543
ENSMUSG00000027447	protein_coding	Cst3	ENSMUST00000149691	processed_transcript		2	-1	148875451	758
ENSMUSG00000059912	processed_pseudogene	Rpl21-ps6	ENSMUST00000074828	processed_pseudogene		17	-1	55915870	468
ENSMUSG00000103559	TEC	Gm38221	ENSMUST00000195146	TEC		2	-1	148890288	365
ENSMUSG00000015134	protein_coding	Aldh1a3	ENSMUST00000173756	retained_intron		7	-1	66406002	535
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000134466	nonsense_mediated_decay		3	1	126597010	2708
ENSMUSG00000093674	protein_coding	Rpl41	ENSMUST00000176010	protein_coding	principal2	10	-1	128549305	582
ENSMUSG00000081580	unprocessed_pseudogene	Gm14129	ENSMUST00000122436	unprocessed_pseudogene		2	-1	148931707	291
ENSMUSG00000015134	protein_coding	Aldh1a3	ENSMUST00000174701	protein_coding		7	-1	66419235	829
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000137050	retained_intron		2	-1	103761241	4080
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000132135	retained_intron		2	-1	103724429	506
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000144590	retained_intron		2	-1	103761204	3497
ENSMUSG00000104474	TEC	Gm38210	ENSMUST00000191944	TEC		1	1	165585183	809
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000209581	retained_intron		7	-1	45154526	4074
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000137600	retained_intron		2	-1	103734493	661
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000151010	retained_intron		2	-1	103733259	474
ENSMUSG00000093674	protein_coding	Rpl41	ENSMUST00000177513	retained_intron		10	-1	128549138	680
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000090447	retained_intron		2	-1	103743357	642
ENSMUSG00000093674	protein_coding	Rpl41	ENSMUST00000176906	protein_coding	alternative2	10	-1	128549102	509
ENSMUSG00000051509	protein_coding	Olfr414	ENSMUST00000192358	protein_coding	principal1	1	1	174424064	4526
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000145189	retained_intron		2	-1	103761270	1674
ENSMUSG00000093674	protein_coding	Rpl41	ENSMUST00000176184	retained_intron		10	-1	128549159	695
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000140895	protein_coding		2	-1	103760926	705
ENSMUSG00000051509	protein_coding	Olfr414	ENSMUST00000053178	protein_coding	principal1	1	1	174430430	955
ENSMUSG00000070476	protein_coding	Fam217b	ENSMUST00000094251	protein_coding	principal1	2	1	178414524	4541
ENSMUSG00000093674	protein_coding	Rpl41	ENSMUST00000176966	retained_intron		10	-1	128549112	523
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000127581	retained_intron		2	-1	103761261	1639
ENSMUSG00000070476	protein_coding	Fam217b	ENSMUST00000129003	processed_transcript		2	1	178414582	363
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000165970	retained_intron		2	-1	103761195	432
ENSMUSG00000027185	protein_coding	Nat10	ENSMUST00000148798	protein_coding		2	-1	103758416	771
ENSMUSG00000015134	protein_coding	Aldh1a3	ENSMUST00000174209	protein_coding		7	-1	66426589	1496
ENSMUSG00000034463	protein_coding	Scara3	ENSMUST00000042046	protein_coding	principal1	14	-1	65953935	3597
ENSMUSG00000062101	protein_coding	Zfp119b	ENSMUST00000056147	protein_coding	principal1	17	-1	55945259	1889
ENSMUSG00000015134	protein_coding	Aldh1a3	ENSMUST00000174215	protein_coding		7	-1	66425701	1066
ENSMUSG00000062101	protein_coding	Zfp119b	ENSMUST00000189452	protein_coding		17	-1	55949500	2078
ENSMUSG00000117352	processed_pseudogene	Gm50029	ENSMUST00000234287	processed_pseudogene		17	1	78109008	570
ENSMUSG00000061833	processed_pseudogene	Gm6311	ENSMUST00000073790	processed_pseudogene		13	1	75954136	878
ENSMUSG00000117493	processed_pseudogene	Gm50030	ENSMUST00000235049	processed_pseudogene		17	1	78157990	260
ENSMUSG00000081675	processed_pseudogene	Gm12712	ENSMUST00000120676	processed_pseudogene		11	-1	72573330	801
ENSMUSG00000105751	processed_pseudogene	Gm43724	ENSMUST00000197516	processed_pseudogene		3	-1	138496093	226
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000113747	protein_coding	alternative2	1	1	74542903	2720
ENSMUSG00000066671	protein_coding	Olfr220	ENSMUST00000194229	protein_coding	principal1	1	1	174442082	3286
ENSMUSG00000083707	processed_pseudogene	Gm13592	ENSMUST00000118148	processed_pseudogene		2	1	65277417	1010
ENSMUSG00000066671	protein_coding	Olfr220	ENSMUST00000085861	protein_coding	principal1	1	1	174448625	978
ENSMUSG00000080766	processed_pseudogene	Gm13593	ENSMUST00000121329	processed_pseudogene		2	-1	65297369	692
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000113750	protein_coding	alternative2	1	1	74542903	2692
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000185411	retained_intron		1	1	74544360	1912
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000027362	protein_coding	principal4	1	1	74544364	2977
ENSMUSG00000006958	protein_coding	Chrd	ENSMUST00000153299	nonsense_mediated_decay		16	1	20733127	3435
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000152707	nonsense_mediated_decay		1	1	74544364	3011
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000189956	processed_transcript		1	1	74560427	512
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000135111	retained_intron		1	1	74564437	671
ENSMUSG00000086610	lincRNA	Gm15408	ENSMUST00000124198	lincRNA		5	1	149006962	1379
ENSMUSG00000071715	protein_coding	Ncf4	ENSMUST00000096357	protein_coding	principal1	15	1	78244801	1464
ENSMUSG00000035164	protein_coding	Zc3h12c	ENSMUST00000213645	protein_coding	principal1	9	-1	52168572	6764
ENSMUSG00000071715	protein_coding	Ncf4	ENSMUST00000133618	protein_coding		15	1	78244844	792
ENSMUSG00000085971	processed_transcript	Gm15411	ENSMUST00000133243	lincRNA		5	-1	149015813	3488
ENSMUSG00000062963	protein_coding	Ufc1	ENSMUST00000080001	protein_coding	principal1	1	-1	171295024	1007
ENSMUSG00000085971	processed_transcript	Gm15411	ENSMUST00000201913	lincRNA		5	-1	149015784	668
ENSMUSG00000103948	TEC	4930594C11Rik	ENSMUST00000192316	TEC		1	-1	37488605	2755
ENSMUSG00000035164	protein_coding	Zc3h12c	ENSMUST00000165519	protein_coding		9	-1	52168111	6133
ENSMUSG00000085971	processed_transcript	Gm15411	ENSMUST00000202128	retained_intron		5	-1	149015813	2022
ENSMUSG00000093473	processed_pseudogene	Gm20620	ENSMUST00000177528	processed_pseudogene		9	-1	58696011	168
ENSMUSG00000062963	protein_coding	Ufc1	ENSMUST00000138974	retained_intron		1	-1	171290440	1677
ENSMUSG00000006958	protein_coding	Chrd	ENSMUST00000232104	retained_intron		16	1	20733129	3125
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000113309	protein_coding	alternative2	1	1	86154798	3555
ENSMUSG00000087272	lincRNA	Gm15409	ENSMUST00000135240	lincRNA		5	1	148959278	520
ENSMUSG00000114844	processed_pseudogene	Gm19222	ENSMUST00000225938	processed_pseudogene		14	-1	65962888	1768
ENSMUSG00000106462	processed_pseudogene	Gm43725	ENSMUST00000200122	processed_pseudogene		3	-1	138504212	369
ENSMUSG00000085639	antisense	Gm15410	ENSMUST00000127763	antisense		5	-1	148948866	544
ENSMUSG00000062963	protein_coding	Ufc1	ENSMUST00000144576	nonsense_mediated_decay		1	-1	171294941	822
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000186509	protein_coding		1	1	86154799	404
ENSMUSG00000106810	unprocessed_pseudogene	Gm43600	ENSMUST00000202134	unprocessed_pseudogene		5	1	148926688	223
ENSMUSG00000006958	protein_coding	Chrd	ENSMUST00000231636	nonsense_mediated_decay		16	1	20733129	3083
ENSMUSG00000003206	protein_coding	Ebi3	ENSMUST00000003274	protein_coding	principal1	17	1	55952640	1154
ENSMUSG00000111561	lincRNA	Gm47957	ENSMUST00000214181	lincRNA		9	-1	52349311	636
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000113749	protein_coding	alternative2	1	1	74542888	4648
ENSMUSG00000032591	protein_coding	Mst1	ENSMUST00000035211	protein_coding	principal2	9	1	108080436	2262
ENSMUSG00000026173	protein_coding	Plcd4	ENSMUST00000067916	protein_coding	alternative2	1	1	74542888	4552
ENSMUSG00000037064	processed_pseudogene	Gm5229	ENSMUST00000039375	processed_pseudogene		17	-1	78177947	358
ENSMUSG00000079069	lincRNA	8430423G03Rik	ENSMUST00000110507	lincRNA		5	1	148950250	639
ENSMUSG00000097077	antisense	Gm16712	ENSMUST00000181962	antisense		17	-1	55959381	1960
ENSMUSG00000006958	protein_coding	Chrd	ENSMUST00000231698	nonsense_mediated_decay		16	1	20733129	3046
ENSMUSG00000062963	protein_coding	Ufc1	ENSMUST00000111302	protein_coding	principal1	1	-1	171294987	914
ENSMUSG00000103874	processed_pseudogene	Gm38360	ENSMUST00000195130	processed_pseudogene		1	-1	192821127	454
ENSMUSG00000071715	protein_coding	Ncf4	ENSMUST00000147303	retained_intron		15	1	78253032	1203
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000027434	protein_coding	principal3	1	1	86154810	5127
ENSMUSG00000006958	protein_coding	Chrd	ENSMUST00000232646	protein_coding	alternative2	16	1	20733129	3076
ENSMUSG00000117612	processed_pseudogene	Gm50031	ENSMUST00000234383	processed_pseudogene		17	1	78184918	156
ENSMUSG00000032591	protein_coding	Mst1	ENSMUST00000162886	protein_coding	alternative2	9	1	108080454	2209
ENSMUSG00000071715	protein_coding	Ncf4	ENSMUST00000126028	retained_intron		15	1	78253246	644
ENSMUSG00000062963	protein_coding	Ufc1	ENSMUST00000152621	retained_intron		1	-1	171294940	907
ENSMUSG00000006958	protein_coding	Chrd	ENSMUST00000232020	retained_intron		16	1	20733434	782
ENSMUSG00000071715	protein_coding	Ncf4	ENSMUST00000146147	retained_intron		15	1	78255452	336
ENSMUSG00000111780	lincRNA	Gm47960	ENSMUST00000216696	lincRNA		9	-1	52401968	991
ENSMUSG00000006958	protein_coding	Chrd	ENSMUST00000231689	retained_intron		16	1	20733503	441
ENSMUSG00000071715	protein_coding	Ncf4	ENSMUST00000148646	retained_intron		15	1	78260878	540
ENSMUSG00000032591	protein_coding	Mst1	ENSMUST00000160184	nonsense_mediated_decay		9	1	108080483	765
ENSMUSG00000117648	bidirectional_promoter_lncRNA	Gm32282	ENSMUST00000234450	bidirectional_promoter_lncRNA		17	-1	78200025	528
ENSMUSG00000006958	protein_coding	Chrd	ENSMUST00000151150	retained_intron		16	1	20736206	4406
ENSMUSG00000032591	protein_coding	Mst1	ENSMUST00000161253	protein_coding		9	1	108084305	408
ENSMUSG00000083358	unprocessed_pseudogene	Olfr1004-ps1	ENSMUST00000120361	unprocessed_pseudogene		2	-1	85656835	580
ENSMUSG00000111112	processed_pseudogene	Gm49389	ENSMUST00000216653	processed_pseudogene		9	1	52404299	517
ENSMUSG00000111520	lincRNA	Gm33125	ENSMUST00000215193	lincRNA		9	1	52402096	837
ENSMUSG00000111520	lincRNA	Gm33125	ENSMUST00000213191	lincRNA		9	1	52402098	1038
ENSMUSG00000114361	processed_pseudogene	Gm31104	ENSMUST00000224924	processed_pseudogene		13	1	112138116	753
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000131412	protein_coding	alternative2	1	1	86154815	2160
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000107260	protein_coding	principal1	3	1	94954075	2355
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000153653	retained_intron		1	1	86154819	1733
ENSMUSG00000047384	TEC	A730013G03Rik	ENSMUST00000195012	TEC		1	-1	192835214	2097
ENSMUSG00000020720	protein_coding	Psmd12	ENSMUST00000021063	protein_coding	principal1	11	1	107479484	1904
ENSMUSG00000047384	TEC	A730013G03Rik	ENSMUST00000057543	TEC		1	-1	192834719	1551
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000150059	protein_coding	alternative2	1	1	86196390	764
ENSMUSG00000032769	protein_coding	Trpa1	ENSMUST00000041447	protein_coding	principal2	1	-1	14918862	4263
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000156675	protein_coding		1	1	86202496	531
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000169051	retained_intron		3	1	126597010	1960
ENSMUSG00000020720	protein_coding	Psmd12	ENSMUST00000106752	protein_coding		11	1	107479528	1955
ENSMUSG00000003208	protein_coding	Yju2	ENSMUST00000233661	protein_coding	alternative2	17	1	55959099	1601
ENSMUSG00000100872	lincRNA	1700065J18Rik	ENSMUST00000190576	lincRNA		1	1	192841661	387
ENSMUSG00000020720	protein_coding	Psmd12	ENSMUST00000106750	protein_coding		11	1	107479577	1311
ENSMUSG00000032769	protein_coding	Trpa1	ENSMUST00000235071	protein_coding	alternative2	1	-1	14918835	3288
ENSMUSG00000062590	protein_coding	Armc9	ENSMUST00000126579	nonsense_mediated_decay		1	1	86244566	550
ENSMUSG00000003208	protein_coding	Yju2	ENSMUST00000233204	retained_intron		17	1	55959172	3557
ENSMUSG00000100872	lincRNA	1700065J18Rik	ENSMUST00000188648	lincRNA		1	1	192841671	348
ENSMUSG00000086442	sense_intronic	Gm11722	ENSMUST00000138702	sense_intronic		11	1	107481916	534
ENSMUSG00000117656	lincRNA	Gm50225	ENSMUST00000237283	lincRNA		17	-1	31690425	626
ENSMUSG00000026229	protein_coding	Psmd1	ENSMUST00000147807	retained_intron		1	1	86064387	613
ENSMUSG00000117355	lincRNA	Gm49999	ENSMUST00000234022	lincRNA		17	1	31789504	1286
ENSMUSG00000117355	lincRNA	Gm49999	ENSMUST00000234824	lincRNA		17	1	31789526	1517
ENSMUSG00000008461	protein_coding	Fut1	ENSMUST00000210150	protein_coding		7	1	45617289	354
ENSMUSG00000003208	protein_coding	Yju2	ENSMUST00000086869	protein_coding	principal2	17	1	55959174	1660
ENSMUSG00000078307	protein_coding	AI593442	ENSMUST00000213937	protein_coding	principal1	9	-1	52679780	5674
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000113097	protein_coding	principal1	X	-1	136743690	1825
ENSMUSG00000026229	protein_coding	Psmd1	ENSMUST00000143200	processed_transcript		1	1	86064387	613
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000145454	nonsense_mediated_decay		3	1	126597020	3178
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000142311	protein_coding		3	1	94954108	486
ENSMUSG00000003208	protein_coding	Yju2	ENSMUST00000233226	retained_intron		17	1	55959224	526
ENSMUSG00000078307	protein_coding	AI593442	ENSMUST00000213843	protein_coding		9	-1	52679437	432
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000033797	protein_coding	principal1	X	-1	136741661	1996
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000137088	protein_coding	principal1	3	1	94954108	4333
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000131869	processed_transcript		3	1	126597035	2993
ENSMUSG00000008461	protein_coding	Fut1	ENSMUST00000008605	protein_coding	principal3	7	1	45617606	2580
ENSMUSG00000078307	protein_coding	AI593442	ENSMUST00000098768	protein_coding	principal1	9	-1	52679429	5615
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000152869	protein_coding		3	1	94954109	538
ENSMUSG00000008461	protein_coding	Fut1	ENSMUST00000209379	protein_coding	alternative2	7	1	45617630	1116
ENSMUSG00000035042	protein_coding	Ccl5	ENSMUST00000035938	protein_coding	principal1	11	-1	83530518	532
ENSMUSG00000041298	protein_coding	Katnal1	ENSMUST00000047257	protein_coding	principal1	5	-1	148928647	6157
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000106400	protein_coding		3	1	126597097	2722
ENSMUSG00000035042	protein_coding	Ccl5	ENSMUST00000125015	retained_intron		11	-1	83530513	668
ENSMUSG00000041298	protein_coding	Katnal1	ENSMUST00000139269	retained_intron		5	-1	148879079	876
ENSMUSG00000112134	lincRNA	Gm40723	ENSMUST00000219407	lincRNA		10	1	83344513	603
ENSMUSG00000002767	protein_coding	Mrpl2	ENSMUST00000002844	protein_coding	principal2	17	1	46646229	1031
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000200171	protein_coding	alternative1	3	1	126597206	5396
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000171289	protein_coding	alternative1	3	1	126597308	2217
ENSMUSG00000041298	protein_coding	Katnal1	ENSMUST00000110508	processed_transcript		5	-1	148929000	2210
ENSMUSG00000002767	protein_coding	Mrpl2	ENSMUST00000156464	processed_transcript		17	1	46646243	434
ENSMUSG00000075212	protein_coding	Olfr154	ENSMUST00000099918	protein_coding	principal1	2	-1	85664455	1079
ENSMUSG00000026229	protein_coding	Psmd1	ENSMUST00000139715	nonsense_mediated_decay		1	1	86064619	2518
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000080411	protein_coding	principal1	X	-1	136741352	1859
ENSMUSG00000041298	protein_coding	Katnal1	ENSMUST00000110509	protein_coding		5	-1	148929320	1151
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000131156	retained_intron		3	1	126597341	992
ENSMUSG00000002767	protein_coding	Mrpl2	ENSMUST00000113429	protein_coding		17	1	46646250	998
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000129293	retained_intron		3	1	126597399	3479
ENSMUSG00000041298	protein_coding	Katnal1	ENSMUST00000149169	protein_coding		5	-1	148928628	767
ENSMUSG00000002767	protein_coding	Mrpl2	ENSMUST00000113430	protein_coding	alternative2	17	1	46646270	991
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000152150	protein_coding		X	-1	136742918	462
ENSMUSG00000114745	lincRNA	Gm48802	ENSMUST00000223784	lincRNA		13	-1	112172068	1135
ENSMUSG00000041298	protein_coding	Katnal1	ENSMUST00000152360	processed_transcript		5	-1	148928665	3131
ENSMUSG00000002767	protein_coding	Mrpl2	ENSMUST00000146183	processed_transcript		17	1	46649012	212
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000106401	protein_coding		3	1	126597414	3059
ENSMUSG00000104438	TEC	Gm37427	ENSMUST00000192356	TEC		13	1	112219193	906
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000136650	protein_coding		X	-1	136742889	384
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000134987	retained_intron		3	1	126778167	3114
ENSMUSG00000110810	unprocessed_pseudogene	Olfr1005-ps1	ENSMUST00000216207	unprocessed_pseudogene		2	1	85669822	488
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000137605	protein_coding		X	-1	136742861	676
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000171950	processed_transcript		3	1	126778740	734
ENSMUSG00000079137	processed_pseudogene	Rpl27-ps1	ENSMUST00000088784	processed_pseudogene		1	-1	171305494	408
ENSMUSG00000106892	protein_coding	Gm42791	ENSMUST00000147473	protein_coding	principal1	5	-1	148995147	727
ENSMUSG00000106892	protein_coding	Gm42791	ENSMUST00000134031	processed_transcript		5	-1	148981093	134
ENSMUSG00000103983	lincRNA	Gm20045	ENSMUST00000192658	lincRNA		1	-1	171326177	5577
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000147043	retained_intron		3	1	126784014	746
ENSMUSG00000056656	protein_coding	Apol8	ENSMUST00000089450	protein_coding	principal1	15	-1	77755273	2697
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000197660	retained_intron		3	1	126795348	744
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000155207	protein_coding		X	-1	136741349	897
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000198487	retained_intron		3	1	126798225	1844
ENSMUSG00000108207	processed_transcript	1810059H22Rik	ENSMUST00000203249	lincRNA		5	-1	148960210	1526
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000137979	processed_transcript		X	-1	136741276	356
ENSMUSG00000108207	processed_transcript	1810059H22Rik	ENSMUST00000203736	retained_intron		5	-1	148956497	1854
ENSMUSG00000056656	protein_coding	Apol8	ENSMUST00000070911	protein_coding	principal1	15	-1	77757003	2801
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000167985	retained_intron		3	1	126801717	591
ENSMUSG00000108207	processed_transcript	1810059H22Rik	ENSMUST00000204570	lincRNA		5	-1	148959704	690
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000167417	retained_intron		3	1	126801717	618
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000113095	protein_coding		X	-1	136741155	848
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000066452	protein_coding		3	1	126802940	896
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000200010	retained_intron		3	1	126804526	2369
ENSMUSG00000056656	protein_coding	Apol8	ENSMUST00000229445	protein_coding		15	-1	77755239	352
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000170149	protein_coding		3	1	126805862	640
ENSMUSG00000056656	protein_coding	Apol8	ENSMUST00000230332	retained_intron		15	-1	77757003	394
ENSMUSG00000108207	processed_transcript	1810059H22Rik	ENSMUST00000203662	lincRNA		5	-1	148969882	546
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000131923	protein_coding		X	-1	136740483	828
ENSMUSG00000108207	processed_transcript	1810059H22Rik	ENSMUST00000204589	retained_intron		5	-1	148959680	792
ENSMUSG00000053819	protein_coding	Camk2d	ENSMUST00000198637	retained_intron		3	1	126807162	3088
ENSMUSG00000108207	processed_transcript	1810059H22Rik	ENSMUST00000203691	retained_intron		5	-1	148964274	460
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000135731	protein_coding		X	-1	136740487	885
ENSMUSG00000056656	protein_coding	Apol8	ENSMUST00000229332	protein_coding		15	-1	77756982	342
ENSMUSG00000105553	TEC	Gm42514	ENSMUST00000196636	TEC		3	1	126746133	1832
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000164609	protein_coding	principal1	X	-1	136742918	1811
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000144132	nonsense_mediated_decay		3	1	94954135	4014
ENSMUSG00000032594	protein_coding	Ip6k1	ENSMUST00000035214	protein_coding	principal1	9	1	108002501	4559
ENSMUSG00000108207	processed_transcript	1810059H22Rik	ENSMUST00000204809	lincRNA		5	-1	148969896	289
ENSMUSG00000038112	protein_coding	AW551984	ENSMUST00000042485	protein_coding	principal1	9	-1	39604124	4293
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000169418	protein_coding	principal1	X	-1	136741352	1782
ENSMUSG00000106475	TEC	Gm43011	ENSMUST00000197897	TEC		3	1	126600029	4433
ENSMUSG00000105586	TEC	Gm43009	ENSMUST00000199979	TEC		3	1	126644461	3566
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000166478	protein_coding	principal1	X	-1	136743686	1720
ENSMUSG00000111060	unprocessed_pseudogene	Gm47238	ENSMUST00000214694	unprocessed_pseudogene		9	1	44650921	404
ENSMUSG00000024042	protein_coding	Sik1	ENSMUST00000024839	protein_coding	principal1	17	-1	31855804	4521
ENSMUSG00000108207	processed_transcript	1810059H22Rik	ENSMUST00000204941	lincRNA		5	-1	148970122	642
ENSMUSG00000031422	protein_coding	Morf4l2	ENSMUST00000166930	protein_coding	principal1	X	-1	136741155	1926
ENSMUSG00000104571	TEC	Gm43010	ENSMUST00000195993	TEC		3	1	126625880	2878
ENSMUSG00000032594	protein_coding	Ip6k1	ENSMUST00000164395	nonsense_mediated_decay		9	1	108002629	847
ENSMUSG00000002032	protein_coding	Tmem25	ENSMUST00000213203	nonsense_mediated_decay		9	-1	44799233	2687
ENSMUSG00000082214	transcribed_processed_pseudogene	Gm15009	ENSMUST00000121387	transcribed_processed_pseudogene		X	1	136802912	322
ENSMUSG00000085237	lincRNA	Gm15406	ENSMUST00000133694	lincRNA		5	-1	148996566	358
ENSMUSG00000038112	protein_coding	AW551984	ENSMUST00000119722	protein_coding	principal1	9	-1	39603687	4224
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000140294	processed_transcript		3	1	94954160	346
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000140331	nonsense_mediated_decay		3	1	94954160	705
ENSMUSG00000085237	lincRNA	Gm15406	ENSMUST00000202229	lincRNA		5	-1	148996509	767
ENSMUSG00000026229	protein_coding	Psmd1	ENSMUST00000027432	protein_coding	principal1	1	1	86064619	3112
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000107254	protein_coding		3	1	94954170	4450
ENSMUSG00000020255	protein_coding	D10Wsu102e	ENSMUST00000020488	protein_coding	principal1	10	1	83360221	123179
ENSMUSG00000026229	protein_coding	Psmd1	ENSMUST00000189234	retained_intron		1	1	86064641	3022
ENSMUSG00000106951	lincRNA	5930430L01Rik	ENSMUST00000145042	lincRNA		5	-1	148995223	3994
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000145472	nonsense_mediated_decay		3	1	94954195	525
ENSMUSG00000024042	protein_coding	Sik1	ENSMUST00000234331	retained_intron		17	-1	31855793	2554
ENSMUSG00000026229	protein_coding	Psmd1	ENSMUST00000133480	retained_intron		1	1	86064692	690
ENSMUSG00000106951	lincRNA	5930430L01Rik	ENSMUST00000152575	lincRNA		5	-1	148995215	2541
ENSMUSG00000024042	protein_coding	Sik1	ENSMUST00000234867	retained_intron		17	-1	31851575	852
ENSMUSG00000026229	protein_coding	Psmd1	ENSMUST00000127104	processed_transcript		1	1	86064871	445
ENSMUSG00000024042	protein_coding	Sik1	ENSMUST00000234142	processed_transcript		17	-1	31855793	301
ENSMUSG00000032594	protein_coding	Ip6k1	ENSMUST00000177396	processed_transcript		9	1	108002634	880
ENSMUSG00000049521	protein_coding	Cdc42ep1	ENSMUST00000059619	protein_coding	principal1	15	1	78842624	2560
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000148803	retained_intron		3	1	94954201	4139
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000187519	protein_coding	principal2	15	-1	79658793	2283
ENSMUSG00000026229	protein_coding	Psmd1	ENSMUST00000152184	processed_transcript		1	1	86110817	939
ENSMUSG00000055022	protein_coding	Cntn1	ENSMUST00000000109	protein_coding	principal1	15	1	92128188	5646
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000107253	protein_coding		3	1	94954226	4367
ENSMUSG00000034839	protein_coding	Larp6	ENSMUST00000038407	protein_coding	principal1	9	1	60712989	2440
ENSMUSG00000113603	TEC	Gm47004	ENSMUST00000221580	TEC		13	1	64262114	2261
ENSMUSG00000101004	processed_pseudogene	Gm8596	ENSMUST00000188004	processed_pseudogene		1	1	133529479	792
ENSMUSG00000026229	protein_coding	Psmd1	ENSMUST00000149946	retained_intron		1	1	86127867	586
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000147237	protein_coding		3	1	94954384	882
ENSMUSG00000032594	protein_coding	Ip6k1	ENSMUST00000167159	retained_intron		9	1	108002643	2157
ENSMUSG00000032594	protein_coding	Ip6k1	ENSMUST00000176854	protein_coding		9	1	108002646	2251
ENSMUSG00000103272	TEC	Gm37914	ENSMUST00000195317	TEC		1	1	86120883	2679
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000229064	protein_coding	alternative2	15	-1	79658793	2271
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000132393	protein_coding		3	1	94954478	536
ENSMUSG00000032594	protein_coding	Ip6k1	ENSMUST00000175874	protein_coding		9	1	108002671	596
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000145031	protein_coding		3	1	94954527	565
ENSMUSG00000038112	protein_coding	AW551984	ENSMUST00000147753	retained_intron		9	-1	39590986	677
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000107255	protein_coding	principal1	3	1	94954763	2350
ENSMUSG00000032594	protein_coding	Ip6k1	ENSMUST00000176566	nonsense_mediated_decay		9	1	108024252	786
ENSMUSG00000038112	protein_coding	AW551984	ENSMUST00000128054	retained_intron		9	-1	39592246	1561
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000142708	retained_intron		3	1	94955471	680
ENSMUSG00000097101	antisense	1810034E14Rik	ENSMUST00000181403	antisense		13	1	64248700	1805
ENSMUSG00000038112	protein_coding	AW551984	ENSMUST00000141370	protein_coding		9	-1	39604403	906
ENSMUSG00000097101	antisense	1810034E14Rik	ENSMUST00000222277	antisense		13	1	64248728	1024
ENSMUSG00000005774	protein_coding	Rfx5	ENSMUST00000029772	protein_coding	principal1	3	1	94955015	4189
ENSMUSG00000097101	antisense	1810034E14Rik	ENSMUST00000185652	antisense		13	1	64248772	465
ENSMUSG00000055022	protein_coding	Cntn1	ENSMUST00000068378	protein_coding	principal1	15	1	92161357	3964
ENSMUSG00000032594	protein_coding	Ip6k1	ENSMUST00000175908	processed_transcript		9	1	108024284	146
ENSMUSG00000097101	antisense	1810034E14Rik	ENSMUST00000189419	antisense		13	1	64266477	253
ENSMUSG00000113816	antisense	Gm47003	ENSMUST00000222936	antisense		13	1	64291077	1481
ENSMUSG00000038112	protein_coding	AW551984	ENSMUST00000136814	retained_intron		9	-1	39603627	632
ENSMUSG00000055022	protein_coding	Cntn1	ENSMUST00000169825	protein_coding	principal1	15	1	92051165	5671
ENSMUSG00000087660	antisense	B230398E01Rik	ENSMUST00000125186	antisense		3	-1	94962048	1958
ENSMUSG00000038112	protein_coding	AW551984	ENSMUST00000130829	protein_coding		9	-1	39603378	336
ENSMUSG00000026228	protein_coding	Htr2b	ENSMUST00000027431	protein_coding	principal1	1	-1	86111970	2083
ENSMUSG00000082736	processed_pseudogene	Gm5381	ENSMUST00000117975	processed_pseudogene		X	-1	13929511	1250
ENSMUSG00000097068	lincRNA	Gm26760	ENSMUST00000181901	lincRNA		15	1	92344359	1619
ENSMUSG00000032594	protein_coding	Ip6k1	ENSMUST00000177158	protein_coding		9	1	108032073	1244
ENSMUSG00000026228	protein_coding	Htr2b	ENSMUST00000155077	protein_coding		1	-1	86110672	520
ENSMUSG00000002032	protein_coding	Tmem25	ENSMUST00000114705	protein_coding	alternative2	9	-1	44799216	2649
ENSMUSG00000032594	protein_coding	Ip6k1	ENSMUST00000176613	protein_coding		9	1	108044863	131
ENSMUSG00000114498	processed_pseudogene	Gm48339	ENSMUST00000224881	processed_pseudogene		14	-1	20058297	446
ENSMUSG00000043501	protein_coding	Lgals2	ENSMUST00000044584	protein_coding	principal1	15	-1	78855529	592
ENSMUSG00000102540	antisense	Gm38134	ENSMUST00000191858	antisense		9	-1	108016608	1234
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000209963	protein_coding	principal1	7	-1	45154573	3537
ENSMUSG00000082575	processed_pseudogene	Eef2-ps2	ENSMUST00000122149	processed_pseudogene		4	-1	143243368	1345
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000211169	protein_coding		7	-1	45144689	445
ENSMUSG00000002032	protein_coding	Tmem25	ENSMUST00000132020	nonsense_mediated_decay		9	-1	44799242	2837
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000107815	protein_coding		7	-1	45154584	2685
ENSMUSG00000117218	transcribed_unprocessed_pseudogene	Gm19283	ENSMUST00000233831	transcribed_unprocessed_pseudogene		17	-1	13385585	1557
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000210725	processed_transcript		7	-1	45144723	521
ENSMUSG00000101639	transcribed_unprocessed_pseudogene	Gm8597	ENSMUST00000191525	transcribed_unprocessed_pseudogene		17	-1	13404191	1109
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000210539	retained_intron		7	-1	45146034	905
ENSMUSG00000115306	TEC	Gm49159	ENSMUST00000226731	TEC		14	-1	86707185	2624
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000210125	protein_coding		7	-1	45154435	408
ENSMUSG00000028354	protein_coding	Fmn2	ENSMUST00000030039	protein_coding	principal1	1	1	174501825	6442
ENSMUSG00000117092	processed_transcript	Gm49934	ENSMUST00000233244	processed_transcript		17	-1	13396325	927
ENSMUSG00000026110	protein_coding	Mgat4a	ENSMUST00000151952	protein_coding	principal1	1	-1	37541016	7251
ENSMUSG00000028354	protein_coding	Fmn2	ENSMUST00000191821	processed_transcript		1	1	174537045	724
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000209957	nonsense_mediated_decay		7	-1	45154490	666
ENSMUSG00000028354	protein_coding	Fmn2	ENSMUST00000195300	processed_transcript		1	1	174609808	497
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000100215	protein_coding	alternative1	2	-1	30359240	1749
ENSMUSG00000026110	protein_coding	Mgat4a	ENSMUST00000154819	protein_coding		1	-1	37536404	2796
ENSMUSG00000028354	protein_coding	Fmn2	ENSMUST00000195621	protein_coding		1	1	174609809	433
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000211362	nonsense_mediated_decay		7	-1	45154500	556
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000210352	retained_intron		7	-1	45147850	169
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000209755	retained_intron		7	-1	45149179	746
ENSMUSG00000028354	protein_coding	Fmn2	ENSMUST00000191971	retained_intron		1	1	174612549	1535
ENSMUSG00000007833	protein_coding	Aldh16a1	ENSMUST00000209889	retained_intron		7	-1	45154566	771
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000028214	protein_coding	principal3	2	-1	30359316	1810
ENSMUSG00000028354	protein_coding	Fmn2	ENSMUST00000193905	processed_transcript		1	1	174714326	600
ENSMUSG00000025431	protein_coding	Crisp1	ENSMUST00000026498	protein_coding	principal1	17	-1	40319207	1416
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000191401	nonsense_mediated_decay		15	-1	79658793	1940
ENSMUSG00000111326	processed_pseudogene	Gm3953	ENSMUST00000213963	processed_pseudogene		9	-1	44664716	789
ENSMUSG00000026110	protein_coding	Mgat4a	ENSMUST00000143636	protein_coding		1	-1	37496130	1802
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000230366	nonsense_mediated_decay		15	-1	79658944	1706
ENSMUSG00000002032	protein_coding	Tmem25	ENSMUST00000002100	protein_coding	principal2	9	-1	44799307	2448
ENSMUSG00000110755	lincRNA	BC049987	ENSMUST00000217474	lincRNA		9	-1	44671707	1255
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000230484	processed_transcript		15	-1	79628061	486
ENSMUSG00000063507	protein_coding	Gm1330	ENSMUST00000081553	protein_coding	principal5	2	-1	149003251	474
ENSMUSG00000036218	protein_coding	Pdzrn4	ENSMUST00000169942	protein_coding	principal1	15	1	92396881	3102
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000231122	retained_intron		15	-1	79626772	799
ENSMUSG00000063507	protein_coding	Gm1330	ENSMUST00000109942	protein_coding	alternative2	2	-1	149003251	555
ENSMUSG00000115543	TEC	B230362B09Rik	ENSMUST00000227224	TEC		15	1	27503912	1621
ENSMUSG00000002032	protein_coding	Tmem25	ENSMUST00000214833	protein_coding		9	-1	44799191	643
ENSMUSG00000026110	protein_coding	Mgat4a	ENSMUST00000149791	nonsense_mediated_decay		1	-1	37496133	424
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000230429	retained_intron		15	-1	79627390	2013
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000113620	protein_coding		2	-1	30359265	1694
ENSMUSG00000016024	protein_coding	Lbp	ENSMUST00000109491	protein_coding		2	1	158306493	1322
ENSMUSG00000110755	lincRNA	BC049987	ENSMUST00000213859	lincRNA		9	-1	44672238	918
ENSMUSG00000002032	protein_coding	Tmem25	ENSMUST00000213972	protein_coding		9	-1	44799205	375
ENSMUSG00000074739	TEC	Gm10750	ENSMUST00000099266	TEC		2	-1	149017237	1506
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000230475	retained_intron		15	-1	79641124	788
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000113621	protein_coding	alternative1	2	-1	30359332	1851
ENSMUSG00000036218	protein_coding	Pdzrn4	ENSMUST00000229173	processed_transcript		15	1	92486661	502
ENSMUSG00000026110	protein_coding	Mgat4a	ENSMUST00000148047	protein_coding		1	-1	37496095	387
ENSMUSG00000110755	lincRNA	BC049987	ENSMUST00000216987	lincRNA		9	-1	44672190	629
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000218654	protein_coding	alternative1	10	-1	127188772	2475
ENSMUSG00000026110	protein_coding	Mgat4a	ENSMUST00000194660	retained_intron		1	-1	37498838	3113
ENSMUSG00000009108	protein_coding	Gnat2	ENSMUST00000058669	protein_coding	principal1	3	1	108092789	2054
ENSMUSG00000026110	protein_coding	Mgat4a	ENSMUST00000195598	retained_intron		1	-1	37536251	3039
ENSMUSG00000002032	protein_coding	Tmem25	ENSMUST00000213363	protein_coding		9	-1	44799208	434
ENSMUSG00000086963	lincRNA	Gm14135	ENSMUST00000135438	lincRNA		2	1	149257277	591
ENSMUSG00000036218	protein_coding	Pdzrn4	ENSMUST00000035399	protein_coding		15	1	92597126	3376
ENSMUSG00000117162	processed_pseudogene	Gm49840	ENSMUST00000233579	processed_pseudogene		17	1	40418667	159
ENSMUSG00000026110	protein_coding	Mgat4a	ENSMUST00000042161	protein_coding	principal1	1	-1	37536235	7030
ENSMUSG00000016024	protein_coding	Lbp	ENSMUST00000152541	processed_transcript		2	1	158306493	1614
ENSMUSG00000009108	protein_coding	Gnat2	ENSMUST00000145101	protein_coding		3	1	108092880	587
ENSMUSG00000002032	protein_coding	Tmem25	ENSMUST00000214431	protein_coding		9	-1	44799206	450
ENSMUSG00000081314	processed_pseudogene	Gm14132	ENSMUST00000117188	processed_pseudogene		2	-1	149334789	1719
ENSMUSG00000036218	protein_coding	Pdzrn4	ENSMUST00000229577	retained_intron		15	1	92743643	485
ENSMUSG00000117095	unprocessed_pseudogene	Gm49841	ENSMUST00000233949	unprocessed_pseudogene		17	1	40433866	266
ENSMUSG00000009108	protein_coding	Gnat2	ENSMUST00000151326	protein_coding		3	1	108093138	808
ENSMUSG00000117073	unprocessed_pseudogene	Gm49843	ENSMUST00000233909	unprocessed_pseudogene		17	1	40449276	73
ENSMUSG00000087233	processed_pseudogene	Gm43213	ENSMUST00000151866	processed_pseudogene		1	-1	37488982	1790
ENSMUSG00000081470	processed_pseudogene	Gm14131	ENSMUST00000119636	processed_pseudogene		2	1	149356687	719
ENSMUSG00000115858	antisense	4930588J15Rik	ENSMUST00000230757	antisense		15	-1	92705955	1754
ENSMUSG00000048191	protein_coding	Muc6	ENSMUST00000189314	protein_coding	alternative2	7	-1	141655319	5087
ENSMUSG00000117215	processed_pseudogene	Gm45926	ENSMUST00000233671	processed_pseudogene		17	-1	40451656	370
ENSMUSG00000117302	processed_pseudogene	Gm34266	ENSMUST00000233044	processed_pseudogene		17	1	40453694	673
ENSMUSG00000117017	unprocessed_pseudogene	Gm49844	ENSMUST00000233217	unprocessed_pseudogene		17	1	40462096	453
ENSMUSG00000022577	protein_coding	Ly6h	ENSMUST00000126129	nonsense_mediated_decay		15	-1	75566648	1813
ENSMUSG00000048191	protein_coding	Muc6	ENSMUST00000190907	protein_coding	principal5	7	-1	141655308	8757
ENSMUSG00000009108	protein_coding	Gnat2	ENSMUST00000142568	retained_intron		3	1	108093192	2518
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000198742	retained_intron		3	1	36863104	3599
ENSMUSG00000039438	protein_coding	Ttc36	ENSMUST00000044694	protein_coding	principal1	9	-1	44803072	888
ENSMUSG00000020256	protein_coding	Aldh1l2	ENSMUST00000020497	protein_coding	principal1	10	-1	83534140	6027
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000046816	retained_intron		15	-1	79658956	2552
ENSMUSG00000009108	protein_coding	Gnat2	ENSMUST00000131856	protein_coding		3	1	108094448	842
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000136287	retained_intron		3	1	36863121	2327
ENSMUSG00000048191	protein_coding	Muc6	ENSMUST00000062451	protein_coding	alternative2	7	-1	141655319	8650
ENSMUSG00000021590	protein_coding	Spata9	ENSMUST00000225553	protein_coding		13	1	75967150	581
ENSMUSG00000110895	TEC	Gm48822	ENSMUST00000214120	TEC		9	-1	75585109	2371
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000231126	retained_intron		15	-1	79658924	677
ENSMUSG00000009108	protein_coding	Gnat2	ENSMUST00000130013	processed_transcript		3	1	108097243	1152
ENSMUSG00000039438	protein_coding	Ttc36	ENSMUST00000216449	retained_intron		9	-1	44801812	470
ENSMUSG00000110750	antisense	Gm48702	ENSMUST00000214931	antisense		9	1	44799258	801
ENSMUSG00000020256	protein_coding	Aldh1l2	ENSMUST00000146640	protein_coding		10	-1	83533395	3938
ENSMUSG00000080829	processed_pseudogene	Gm8545	ENSMUST00000120692	processed_pseudogene		X	1	74006702	801
ENSMUSG00000020256	protein_coding	Aldh1l2	ENSMUST00000147381	processed_transcript		10	-1	83496017	347
ENSMUSG00000022265	protein_coding	Ank	ENSMUST00000022875	protein_coding	principal1	15	1	27466677	3498
ENSMUSG00000020256	protein_coding	Aldh1l2	ENSMUST00000141184	processed_transcript		10	-1	83497502	1383
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000109646	protein_coding		15	-1	79658749	1896
ENSMUSG00000042564	protein_coding	Fam227a	ENSMUST00000109648	protein_coding	alternative2	15	-1	79658956	5187
ENSMUSG00000021590	protein_coding	Spata9	ENSMUST00000022081	protein_coding	principal1	13	1	75967739	1057
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000019611	protein_coding	principal2	10	-1	127190019	2218
ENSMUSG00000022265	protein_coding	Ank	ENSMUST00000134004	retained_intron		15	1	27571447	1911
ENSMUSG00000021590	protein_coding	Spata9	ENSMUST00000223744	processed_transcript		13	1	75967747	908
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000177292	protein_coding	principal1	9	1	58582240	1390
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000167353	protein_coding		10	-1	127189823	2189
ENSMUSG00000089812	antisense	Gm15867	ENSMUST00000159407	antisense		1	1	192854923	388
ENSMUSG00000039154	protein_coding	Shd	ENSMUST00000044216	protein_coding	alternative2	17	1	55970467	1546
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000182031	retained_intron		17	1	56584825	1755
ENSMUSG00000022577	protein_coding	Ly6h	ENSMUST00000127095	protein_coding	principal3	15	-1	75567255	1336
ENSMUSG00000046034	protein_coding	Otulin	ENSMUST00000228179	protein_coding		15	-1	27608861	472
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000222006	protein_coding		10	-1	127189989	1896
ENSMUSG00000039154	protein_coding	Shd	ENSMUST00000225145	protein_coding		17	1	55970488	998
ENSMUSG00000039154	protein_coding	Shd	ENSMUST00000224021	retained_intron		17	1	55970541	643
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000219587	retained_intron		10	-1	127184944	738
ENSMUSG00000022577	protein_coding	Ly6h	ENSMUST00000023241	protein_coding	alternative1	15	-1	75566657	906
ENSMUSG00000020256	protein_coding	Aldh1l2	ENSMUST00000138858	retained_intron		10	-1	83534081	3505
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000219428	retained_intron		10	-1	127185186	415
ENSMUSG00000020256	protein_coding	Aldh1l2	ENSMUST00000143793	processed_transcript		10	-1	83508120	804
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000151354	retained_intron		2	-1	30359305	1823
ENSMUSG00000020256	protein_coding	Aldh1l2	ENSMUST00000125193	processed_transcript		10	-1	83513720	692
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000208253	protein_coding	principal1	7	-1	44892391	3693
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000218864	nonsense_mediated_decay		10	-1	127187223	645
ENSMUSG00000022577	protein_coding	Ly6h	ENSMUST00000156032	protein_coding	principal3	15	-1	75567216	752
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000218478	retained_intron		10	-1	127188294	732
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000142689	processed_transcript		2	-1	30346101	571
ENSMUSG00000022577	protein_coding	Ly6h	ENSMUST00000150125	retained_intron		15	-1	75566632	847
ENSMUSG00000075211	protein_coding	Olfr1006	ENSMUST00000216084	protein_coding	principal1	2	-1	85678408	1572
ENSMUSG00000022577	protein_coding	Ly6h	ENSMUST00000228961	retained_intron		15	-1	75567046	615
ENSMUSG00000022577	protein_coding	Ly6h	ENSMUST00000163116	protein_coding	alternative1	15	-1	75566648	2801
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000218587	nonsense_mediated_decay		10	-1	127189833	798
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000177173	protein_coding	principal1	9	1	107992497	2480
ENSMUSG00000019467	protein_coding	Arhgef25	ENSMUST00000219245	protein_coding		10	-1	127190083	321
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000085651	protein_coding		9	1	58582292	2024
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000128387	processed_transcript		2	-1	30359337	820
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000003049	protein_coding		7	-1	44892712	2619
ENSMUSG00000039154	protein_coding	Shd	ENSMUST00000223629	protein_coding	principal2	17	1	55970589	1430
ENSMUSG00000116588	lincRNA	Gm49655	ENSMUST00000231343	lincRNA		16	-1	70114717	961
ENSMUSG00000044165	protein_coding	Bcl2l15	ENSMUST00000062945	protein_coding	principal1	3	1	103832601	833
ENSMUSG00000022577	protein_coding	Ly6h	ENSMUST00000065417	protein_coding	alternative1	15	-1	75566856	985
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000146400	retained_intron		2	-1	30347656	836
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000177380	non_stop_decay		9	1	58582374	429
ENSMUSG00000075211	protein_coding	Olfr1006	ENSMUST00000099917	protein_coding	principal1	2	-1	85678767	1529
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000176557	protein_coding		9	1	58582406	1898
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000208551	protein_coding		7	-1	44892366	2678
ENSMUSG00000039154	protein_coding	Shd	ENSMUST00000233858	retained_intron		17	1	55971434	430
ENSMUSG00000046034	protein_coding	Otulin	ENSMUST00000059662	protein_coding	principal1	15	-1	27630693	1491
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000142720	retained_intron		2	-1	30347587	943
ENSMUSG00000039154	protein_coding	Shd	ENSMUST00000223687	retained_intron		17	1	55973058	792
ENSMUSG00000016262	protein_coding	Sertad4	ENSMUST00000155579	protein_coding	principal1	1	-1	192855756	3350
ENSMUSG00000039154	protein_coding	Shd	ENSMUST00000223841	retained_intron		17	1	55976090	536
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000140801	retained_intron		2	-1	30355365	1023
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000175945	nonsense_mediated_decay		9	1	58582407	627
ENSMUSG00000044165	protein_coding	Bcl2l15	ENSMUST00000106822	protein_coding		3	1	103832771	1902
ENSMUSG00000046034	protein_coding	Otulin	ENSMUST00000228439	nonsense_mediated_decay		15	-1	27630678	811
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000140899	retained_intron		2	-1	30354880	783
ENSMUSG00000004317	protein_coding	Clcn5	ENSMUST00000004428	protein_coding	principal3	X	-1	7188714	8390
ENSMUSG00000078346	protein_coding	H2al1n	ENSMUST00000105137	protein_coding	principal1	X	1	14211148	514
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000177064	protein_coding		9	1	58582436	582
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000151145	processed_transcript		2	-1	30359245	723
ENSMUSG00000044165	protein_coding	Bcl2l15	ENSMUST00000199772	processed_transcript		3	1	103846824	665
ENSMUSG00000016262	protein_coding	Sertad4	ENSMUST00000155503	protein_coding		1	-1	192851747	516
ENSMUSG00000115568	TEC	Tiaf2	ENSMUST00000227393	TEC		15	1	27479006	1897
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000207278	protein_coding		7	-1	44892419	2287
ENSMUSG00000080733	processed_pseudogene	Gm14867	ENSMUST00000120156	processed_pseudogene		X	1	14289739	866
ENSMUSG00000016262	protein_coding	Sertad4	ENSMUST00000125391	processed_transcript		1	-1	192855486	489
ENSMUSG00000044165	protein_coding	Bcl2l15	ENSMUST00000196184	processed_transcript		3	1	103851968	828
ENSMUSG00000084907	lincRNA	Gm14505	ENSMUST00000145383	lincRNA		X	1	14796735	831
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000139963	retained_intron		2	-1	30359260	1189
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000207206	retained_intron		7	-1	44881308	785
ENSMUSG00000004317	protein_coding	Clcn5	ENSMUST00000154382	retained_intron		X	-1	7188673	4731
ENSMUSG00000016262	protein_coding	Sertad4	ENSMUST00000016406	protein_coding	principal1	1	-1	192851747	3090
ENSMUSG00000081763	processed_pseudogene	Gm9435	ENSMUST00000120379	processed_pseudogene		X	-1	14955974	877
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000176896	nonsense_mediated_decay		9	1	58582441	841
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000207848	protein_coding		7	-1	44884139	616
ENSMUSG00000026860	protein_coding	Sh3glb2	ENSMUST00000163668	protein_coding	alternative1	2	-1	30359289	1733
ENSMUSG00000050069	protein_coding	Grem2	ENSMUST00000055294	protein_coding	principal1	1	-1	174921819	3745
ENSMUSG00000016024	protein_coding	Lbp	ENSMUST00000016168	protein_coding	principal1	2	1	158306493	2525
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000176126	processed_transcript		9	1	58582444	487
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000209191	protein_coding		7	-1	44884710	726
ENSMUSG00000045217	transcribed_processed_pseudogene	Ppp1r2-ps9	ENSMUST00000173852	processed_transcript		X	-1	15111466	882
ENSMUSG00000045217	transcribed_processed_pseudogene	Ppp1r2-ps9	ENSMUST00000173100	transcribed_processed_pseudogene		X	-1	15111380	549
ENSMUSG00000045107	protein_coding	Saysd1	ENSMUST00000059666	protein_coding	principal1	14	-1	20083183	2315
ENSMUSG00000016024	protein_coding	Lbp	ENSMUST00000146600	retained_intron		2	1	158306612	1723
ENSMUSG00000082838	processed_pseudogene	Gm14519	ENSMUST00000118490	processed_pseudogene		X	1	15365179	312
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000208552	retained_intron		7	-1	44883184	645
ENSMUSG00000111020	lincRNA	Gm1715	ENSMUST00000213681	lincRNA		9	1	52679863	1018
ENSMUSG00000016024	protein_coding	Lbp	ENSMUST00000129811	protein_coding		2	1	158314206	436
ENSMUSG00000110833	processed_pseudogene	Gm47981	ENSMUST00000216112	processed_pseudogene		9	1	52764011	229
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000176916	nonsense_mediated_decay		9	1	58629105	1401
ENSMUSG00000083931	processed_pseudogene	Gm14518	ENSMUST00000117351	processed_pseudogene		X	1	15522456	542
ENSMUSG00000102162	processed_pseudogene	Gm2367	ENSMUST00000192374	processed_pseudogene		1	1	192888571	472
ENSMUSG00000081994	processed_pseudogene	Gm14517	ENSMUST00000119040	processed_pseudogene		X	-1	15524761	337
ENSMUSG00000045107	protein_coding	Saysd1	ENSMUST00000226090	processed_transcript		14	-1	20138534	381
ENSMUSG00000104251	processed_pseudogene	Gm18036	ENSMUST00000195256	processed_pseudogene		1	1	180874878	272
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000207654	protein_coding		7	-1	44892407	1840
ENSMUSG00000004317	protein_coding	Clcn5	ENSMUST00000128319	protein_coding		X	-1	7319358	1073
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000176250	protein_coding		9	1	58629106	4531
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000176306	nonsense_mediated_decay		9	1	107995690	747
ENSMUSG00000092202	unprocessed_pseudogene	Stk19-ps1	ENSMUST00000174597	unprocessed_pseudogene		17	-1	34747154	517
ENSMUSG00000004317	protein_coding	Clcn5	ENSMUST00000115746	protein_coding	alternative1	X	-1	7319233	3052
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000123130	processed_transcript		7	-1	44884671	378
ENSMUSG00000086048	lincRNA	Drr1	ENSMUST00000151575	lincRNA		X	-1	15933344	2789
ENSMUSG00000086048	lincRNA	Drr1	ENSMUST00000133333	lincRNA		X	-1	15939249	2789
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000177021	retained_intron		9	1	58650199	594
ENSMUSG00000004317	protein_coding	Clcn5	ENSMUST00000132126	processed_transcript		X	-1	7319170	355
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000176196	retained_intron		9	1	107995726	583
ENSMUSG00000092543	unprocessed_pseudogene	Skiv2l-ps1	ENSMUST00000173935	unprocessed_pseudogene		17	-1	34771228	658
ENSMUSG00000019122	protein_coding	Ccl9	ENSMUST00000019266	protein_coding	principal1	11	-1	83578636	3006
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000208556	nonsense_mediated_decay		7	-1	44892401	794
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000177020	processed_transcript		9	1	58651976	486
ENSMUSG00000032336	protein_coding	Nptn	ENSMUST00000114121	protein_coding		9	1	58582407	863
ENSMUSG00000081312	processed_pseudogene	Gm14520	ENSMUST00000119258	processed_pseudogene		X	-1	16275907	387
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000177226	retained_intron		9	1	107995732	698
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000207490	protein_coding		7	-1	44891870	493
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000177093	retained_intron		9	1	107995756	387
ENSMUSG00000019122	protein_coding	Ccl9	ENSMUST00000136131	processed_transcript		11	-1	83577142	398
ENSMUSG00000085864	lincRNA	C330019F10Rik	ENSMUST00000149428	lincRNA		11	-1	107527220	459
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000035215	retained_intron		9	1	107995763	813
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000207788	nonsense_mediated_decay		7	-1	44892418	372
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000176919	retained_intron		9	1	107995783	587
ENSMUSG00000074269	protein_coding	Rec114	ENSMUST00000175792	processed_transcript		9	-1	58659292	516
ENSMUSG00000002968	protein_coding	Med25	ENSMUST00000207196	retained_intron		7	-1	44892417	2427
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000176183	processed_transcript		9	1	107995906	524
ENSMUSG00000103280	TEC	Gm37277	ENSMUST00000194052	TEC		1	-1	4906861	1111
ENSMUSG00000092200	unprocessed_pseudogene	Tnxa	ENSMUST00000173277	unprocessed_pseudogene		17	1	34771395	3418
ENSMUSG00000066652	protein_coding	Lefty2	ENSMUST00000085797	protein_coding	principal1	1	1	180893108	2473
ENSMUSG00000066652	protein_coding	Lefty2	ENSMUST00000155546	retained_intron		1	1	180894458	422
ENSMUSG00000032171	protein_coding	Pin1	ENSMUST00000034689	protein_coding	principal1	9	1	20652095	3843
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000130393	protein_coding		2	-1	165287772	376
ENSMUSG00000022021	protein_coding	Diaph3	ENSMUST00000168889	protein_coding	principal2	14	-1	87141224	4582
ENSMUSG00000074269	protein_coding	Rec114	ENSMUST00000098674	protein_coding	principal1	9	-1	58741559	883
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000175759	protein_coding		9	1	107995944	762
ENSMUSG00000022021	protein_coding	Diaph3	ENSMUST00000227638	processed_transcript		14	-1	86789889	678
ENSMUSG00000074269	protein_coding	Rec114	ENSMUST00000187632	processed_transcript		9	-1	58664269	597
ENSMUSG00000074269	protein_coding	Rec114	ENSMUST00000186592	protein_coding		9	-1	58660367	420
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000177516	retained_intron		9	1	107995998	599
ENSMUSG00000074269	protein_coding	Rec114	ENSMUST00000186960	protein_coding		9	-1	58743964	307
ENSMUSG00000022021	protein_coding	Diaph3	ENSMUST00000226745	protein_coding		14	-1	86748844	713
ENSMUSG00000022021	protein_coding	Diaph3	ENSMUST00000226254	protein_coding		14	-1	86749133	682
ENSMUSG00000036578	protein_coding	Fxyd7	ENSMUST00000206341	protein_coding	alternative2	7	-1	31051403	620
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000175802	protein_coding		9	1	107996616	506
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000176334	protein_coding		9	1	107997372	642
ENSMUSG00000022021	protein_coding	Diaph3	ENSMUST00000227666	retained_intron		14	-1	87141170	3337
ENSMUSG00000022021	protein_coding	Diaph3	ENSMUST00000226492	processed_transcript		14	-1	87141164	3046
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000177508	protein_coding		9	1	107997593	560
ENSMUSG00000036578	protein_coding	Fxyd7	ENSMUST00000073892	protein_coding	principal2	7	-1	31051467	693
ENSMUSG00000059706	processed_transcript	A830035A12Rik	ENSMUST00000147445	processed_transcript		11	-1	107548373	861
ENSMUSG00000003423	protein_coding	Pih1d1	ENSMUST00000210139	protein_coding	principal1	7	1	45154303	1077
ENSMUSG00000022021	protein_coding	Diaph3	ENSMUST00000228000	non_stop_decay		14	-1	87141235	2090
ENSMUSG00000032595	protein_coding	Cdhr4	ENSMUST00000176373	protein_coding		9	1	107997678	492
ENSMUSG00000024365	protein_coding	Cyp21a1	ENSMUST00000025223	protein_coding	principal1	17	-1	34804561	2058
ENSMUSG00000083996	transcribed_processed_pseudogene	Gm11649	ENSMUST00000118214	transcribed_processed_pseudogene		11	-1	107532305	375
ENSMUSG00000003423	protein_coding	Pih1d1	ENSMUST00000211709	protein_coding		7	1	45154314	531
ENSMUSG00000022021	protein_coding	Diaph3	ENSMUST00000226134	processed_transcript		14	-1	87141143	558
ENSMUSG00000024365	protein_coding	Cyp21a1	ENSMUST00000173970	retained_intron		17	-1	34803402	751
ENSMUSG00000022021	protein_coding	Diaph3	ENSMUST00000022599	protein_coding	alternative2	14	-1	87141224	4582
ENSMUSG00000024365	protein_coding	Cyp21a1	ENSMUST00000173394	processed_transcript		17	-1	34804407	433
ENSMUSG00000003423	protein_coding	Pih1d1	ENSMUST00000085375	protein_coding	principal1	7	1	45154314	1185
ENSMUSG00000030226	protein_coding	Lmo3	ENSMUST00000162772	protein_coding		6	-1	138581968	3664
ENSMUSG00000000730	protein_coding	Dnmt3l	ENSMUST00000135316	processed_transcript		10	1	78041947	210
ENSMUSG00000003423	protein_coding	Pih1d1	ENSMUST00000209847	protein_coding		7	1	45154349	387
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000123916	retained_intron		3	1	36863121	3958
ENSMUSG00000095956	lincRNA	1700036A12Rik	ENSMUST00000190053	lincRNA		9	1	60743120	1828
ENSMUSG00000020721	protein_coding	Helz	ENSMUST00000141730	processed_transcript		11	1	107547930	687
ENSMUSG00000095956	lincRNA	1700036A12Rik	ENSMUST00000178191	lincRNA		9	1	60769602	354
ENSMUSG00000003423	protein_coding	Pih1d1	ENSMUST00000209954	protein_coding		7	1	45154644	548
ENSMUSG00000030226	protein_coding	Lmo3	ENSMUST00000163065	protein_coding	principal1	6	-1	138421452	2425
ENSMUSG00000003423	protein_coding	Pih1d1	ENSMUST00000107811	protein_coding	principal1	7	1	45155943	1072
ENSMUSG00000115438	transcribed_processed_pseudogene	Gm49193	ENSMUST00000227730	processed_transcript		14	1	87160005	2161
ENSMUSG00000115438	transcribed_processed_pseudogene	Gm49193	ENSMUST00000228953	transcribed_processed_pseudogene		14	1	87160026	1816
ENSMUSG00000030226	protein_coding	Lmo3	ENSMUST00000160050	nonsense_mediated_decay		6	-1	138424615	1456
ENSMUSG00000003423	protein_coding	Pih1d1	ENSMUST00000211414	protein_coding		7	1	45155987	471
ENSMUSG00000102284	TEC	Gm37002	ENSMUST00000194560	TEC		14	-1	87200074	373
ENSMUSG00000030226	protein_coding	Lmo3	ENSMUST00000163024	protein_coding		6	-1	138422974	1331
ENSMUSG00000003423	protein_coding	Pih1d1	ENSMUST00000209400	retained_intron		7	1	45158848	484
ENSMUSG00000003423	protein_coding	Pih1d1	ENSMUST00000211336	retained_intron		7	1	45159593	350
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000182533	protein_coding	alternative2	17	1	56584974	3122
ENSMUSG00000052921	protein_coding	Arhgef15	ENSMUST00000108671	protein_coding	principal1	11	-1	68957480	4372
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000182800	protein_coding		17	1	56584982	342
ENSMUSG00000052921	protein_coding	Arhgef15	ENSMUST00000131686	processed_transcript		11	-1	68947380	805
ENSMUSG00000052921	protein_coding	Arhgef15	ENSMUST00000151520	processed_transcript		11	-1	68947825	726
ENSMUSG00000037031	protein_coding	Tspan15	ENSMUST00000047883	protein_coding	principal1	10	-1	62231251	3638
ENSMUSG00000030226	protein_coding	Lmo3	ENSMUST00000161450	protein_coding		6	-1	138422917	1048
ENSMUSG00000030226	protein_coding	Lmo3	ENSMUST00000203435	protein_coding		6	-1	138427162	572
ENSMUSG00000052921	protein_coding	Arhgef15	ENSMUST00000141747	processed_transcript		11	-1	68947665	428
ENSMUSG00000037031	protein_coding	Tspan15	ENSMUST00000218394	retained_intron		10	-1	62188905	717
ENSMUSG00000030226	protein_coding	Lmo3	ENSMUST00000162185	protein_coding		6	-1	138422999	762
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000095224	protein_coding	principal2	17	1	56585059	3106
ENSMUSG00000048402	protein_coding	Gli2	ENSMUST00000062483	protein_coding	principal1	1	-1	119053619	6637
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000131184	nonsense_mediated_decay		15	1	102518192	1819
ENSMUSG00000037031	protein_coding	Tspan15	ENSMUST00000219106	processed_transcript		10	-1	62194205	757
ENSMUSG00000030226	protein_coding	Lmo3	ENSMUST00000162932	protein_coding		6	-1	138426816	784
ENSMUSG00000052921	protein_coding	Arhgef15	ENSMUST00000108670	retained_intron		11	-1	68952174	2659
ENSMUSG00000037031	protein_coding	Tspan15	ENSMUST00000218824	retained_intron		10	-1	62190380	745
ENSMUSG00000037031	protein_coding	Tspan15	ENSMUST00000220143	retained_intron		10	-1	62201777	3569
ENSMUSG00000100166	antisense	B230110G15Rik	ENSMUST00000190868	antisense		6	1	138580624	772
ENSMUSG00000052921	protein_coding	Arhgef15	ENSMUST00000065040	protein_coding	principal1	11	-1	68955074	4123
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000182951	nonsense_mediated_decay		17	1	56588840	774
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000141266	retained_intron		15	1	102518246	1033
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000182159	retained_intron		17	1	56594514	1998
ENSMUSG00000089957	antisense	A830011K09Rik	ENSMUST00000159822	antisense		6	1	138423105	1790
ENSMUSG00000089957	antisense	A830011K09Rik	ENSMUST00000203961	antisense		6	1	138423200	500
ENSMUSG00000048402	protein_coding	Gli2	ENSMUST00000161301	protein_coding		1	-1	119053339	1411
ENSMUSG00000005202	protein_coding	Shbg	ENSMUST00000005334	protein_coding	principal1	11	-1	69617905	1419
ENSMUSG00000089957	antisense	A830011K09Rik	ENSMUST00000162868	antisense		6	1	138423271	2201
ENSMUSG00000007480	protein_coding	Mc5r	ENSMUST00000172148	protein_coding	alternative2	18	1	68337596	3904
ENSMUSG00000107675	antisense	Gm30332	ENSMUST00000204221	antisense		6	1	138443973	2345
ENSMUSG00000005202	protein_coding	Shbg	ENSMUST00000137159	processed_transcript		11	-1	69616940	578
ENSMUSG00000110855	unprocessed_pseudogene	Olfr1007-ps1	ENSMUST00000217468	unprocessed_pseudogene		2	1	85683262	138
ENSMUSG00000007480	protein_coding	Mc5r	ENSMUST00000239469	protein_coding	principal2	18	1	68337603	1162
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000182378	retained_intron		17	1	56597770	3628
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000183041	retained_intron		17	1	56601397	714
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000182461	retained_intron		17	1	56602970	703
ENSMUSG00000050603	protein_coding	Olfr1008	ENSMUST00000054868	protein_coding	principal1	2	1	85689431	942
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000182913	retained_intron		17	1	56604359	420
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000182454	retained_intron		17	1	56605222	1073
ENSMUSG00000048827	protein_coding	Pkd1l3	ENSMUST00000057344	protein_coding	principal3	8	1	109614517	6456
ENSMUSG00000048402	protein_coding	Gli2	ENSMUST00000162552	nonsense_mediated_decay		1	-1	119053339	862
ENSMUSG00000071054	protein_coding	Safb	ENSMUST00000183318	retained_intron		17	1	56605740	423
ENSMUSG00000113601	TEC	Gm48735	ENSMUST00000222614	TEC		13	-1	62682501	1310
ENSMUSG00000045569	protein_coding	Mc2r	ENSMUST00000052347	protein_coding	principal1	18	-1	68429320	1631
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000152881	nonsense_mediated_decay		3	1	36863156	4658
ENSMUSG00000048402	protein_coding	Gli2	ENSMUST00000161056	nonsense_mediated_decay		1	-1	119053339	1097
ENSMUSG00000039155	protein_coding	Cdh26	ENSMUST00000108912	protein_coding	alternative2	2	1	178430531	2908
ENSMUSG00000074863	protein_coding	Platr25	ENSMUST00000221996	protein_coding	alternative2	13	-1	62684945	2458
ENSMUSG00000048402	protein_coding	Gli2	ENSMUST00000160991	nonsense_mediated_decay		1	-1	119053339	1194
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000108145	retained_intron		3	1	36864469	3551
ENSMUSG00000118288	processed_pseudogene	Gm50258	ENSMUST00000236693	processed_pseudogene		18	1	68432793	385
ENSMUSG00000048402	protein_coding	Gli2	ENSMUST00000159839	nonsense_mediated_decay		1	-1	119053339	911
ENSMUSG00000074863	protein_coding	Platr25	ENSMUST00000220733	protein_coding	principal5	13	-1	62760700	2859
ENSMUSG00000074863	protein_coding	Platr25	ENSMUST00000222477	protein_coding		13	-1	62712753	1705
ENSMUSG00000048402	protein_coding	Gli2	ENSMUST00000161451	protein_coding		1	-1	119053339	803
ENSMUSG00000048402	protein_coding	Gli2	ENSMUST00000162607	protein_coding		1	-1	119053339	822
ENSMUSG00000048827	protein_coding	Pkd1l3	ENSMUST00000212537	protein_coding	alternative2	8	1	109614517	6576
ENSMUSG00000074863	protein_coding	Platr25	ENSMUST00000223219	nonsense_mediated_decay		13	-1	62724217	1765
ENSMUSG00000074863	protein_coding	Platr25	ENSMUST00000221999	protein_coding		13	-1	62684918	615
ENSMUSG00000048402	protein_coding	Gli2	ENSMUST00000159678	processed_transcript		1	-1	118982588	367
ENSMUSG00000074863	protein_coding	Platr25	ENSMUST00000223528	nonsense_mediated_decay		13	-1	62724209	559
ENSMUSG00000020775	protein_coding	Mrpl38	ENSMUST00000106439	protein_coding	principal1	11	-1	116138868	1411
ENSMUSG00000074863	protein_coding	Platr25	ENSMUST00000143260	protein_coding		13	-1	62726689	2509
ENSMUSG00000116531	processed_pseudogene	Gm19082	ENSMUST00000232445	processed_pseudogene		16	-1	70144272	1108
ENSMUSG00000074863	protein_coding	Platr25	ENSMUST00000222303	protein_coding		13	-1	62760709	1171
ENSMUSG00000039155	protein_coding	Cdh26	ENSMUST00000042092	protein_coding	principal3	2	1	178430607	2891
ENSMUSG00000048827	protein_coding	Pkd1l3	ENSMUST00000109242	protein_coding	alternative2	8	1	109614517	6606
ENSMUSG00000074863	protein_coding	Platr25	ENSMUST00000220864	processed_transcript		13	-1	62760692	1015
ENSMUSG00000074863	protein_coding	Platr25	ENSMUST00000222602	protein_coding		13	-1	62701046	939
ENSMUSG00000116794	processed_pseudogene	Gm49656	ENSMUST00000231873	processed_pseudogene		16	1	70189962	436
ENSMUSG00000113078	TEC	Gm48734	ENSMUST00000222940	TEC		13	-1	62737195	2289
ENSMUSG00000117623	unitary_pseudogene	Gm50014	ENSMUST00000234873	unitary_pseudogene		3	1	66364539	88
ENSMUSG00000048827	protein_coding	Pkd1l3	ENSMUST00000212609	retained_intron		8	1	109614702	701
ENSMUSG00000103600	processed_pseudogene	Gm17952	ENSMUST00000193914	processed_pseudogene		3	-1	66563551	747
ENSMUSG00000033981	protein_coding	Gria2	ENSMUST00000075316	protein_coding	principal3	3	-1	80802835	10371
ENSMUSG00000039155	protein_coding	Cdh26	ENSMUST00000176869	retained_intron		2	1	178460630	374
ENSMUSG00000116650	processed_pseudogene	Gm49657	ENSMUST00000231797	processed_pseudogene		16	1	70285257	425
ENSMUSG00000103700	processed_pseudogene	Gm6555	ENSMUST00000195167	processed_pseudogene		3	1	66882350	789
ENSMUSG00000034055	protein_coding	Phka1	ENSMUST00000052012	protein_coding	principal4	X	-1	102644246	6115
ENSMUSG00000048827	protein_coding	Pkd1l3	ENSMUST00000213034	retained_intron		8	1	109631332	1713
ENSMUSG00000020081	protein_coding	Tacr2	ENSMUST00000020278	protein_coding	principal1	10	1	62252438	2258
ENSMUSG00000034055	protein_coding	Phka1	ENSMUST00000043596	protein_coding	alternative2	X	-1	102644246	5938
ENSMUSG00000033981	protein_coding	Gria2	ENSMUST00000107745	protein_coding	alternative1	3	-1	80802835	4026
ENSMUSG00000055523	protein_coding	Gucy2g	ENSMUST00000069183	protein_coding	principal1	19	-1	55241236	3888
ENSMUSG00000048827	protein_coding	Pkd1l3	ENSMUST00000212545	protein_coding		8	1	109647485	2450
ENSMUSG00000018927	protein_coding	Ccl6	ENSMUST00000019071	protein_coding	principal1	11	-1	83593087	1440
ENSMUSG00000034055	protein_coding	Phka1	ENSMUST00000119229	protein_coding	alternative2	X	-1	102644246	6025
ENSMUSG00000046229	protein_coding	Scand1	ENSMUST00000079125	protein_coding	principal1	2	-1	156312747	803
ENSMUSG00000117811	lincRNA	Gm29677	ENSMUST00000238121	lincRNA		18	1	68559422	1972
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000095456	protein_coding	alternative2	8	1	12873827	3926
ENSMUSG00000020775	protein_coding	Mrpl38	ENSMUST00000142550	retained_intron		11	-1	116138775	1403
ENSMUSG00000033981	protein_coding	Gria2	ENSMUST00000192463	nonsense_mediated_decay		3	-1	80802579	3681
ENSMUSG00000118041	processed_pseudogene	Gm50259	ENSMUST00000236766	processed_pseudogene		18	-1	68568744	334
ENSMUSG00000018927	protein_coding	Ccl6	ENSMUST00000138145	retained_intron		11	-1	83589875	776
ENSMUSG00000082321	processed_pseudogene	Gm14253	ENSMUST00000122112	processed_pseudogene		2	-1	156347840	639
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000138387	processed_transcript		8	1	12873948	385
ENSMUSG00000081751	processed_pseudogene	Gm14251	ENSMUST00000122133	processed_pseudogene		2	1	156322402	279
ENSMUSG00000018927	protein_coding	Ccl6	ENSMUST00000150243	retained_intron		11	-1	83592975	442
ENSMUSG00000034055	protein_coding	Phka1	ENSMUST00000122022	protein_coding	alternative2	X	-1	102644246	6115
ENSMUSG00000118317	lincRNA	Gm30641	ENSMUST00000237857	lincRNA		18	1	68581915	3748
ENSMUSG00000034055	protein_coding	Phka1	ENSMUST00000120270	protein_coding	alternative2	X	-1	102644246	6064
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000173099	protein_coding		8	1	12915256	6081
ENSMUSG00000020775	protein_coding	Mrpl38	ENSMUST00000133159	retained_intron		11	-1	116138789	913
ENSMUSG00000020775	protein_coding	Mrpl38	ENSMUST00000145655	retained_intron		11	-1	116134456	264
ENSMUSG00000118102	lincRNA	Gm50260	ENSMUST00000237657	lincRNA		18	-1	68805358	986
ENSMUSG00000085546	antisense	Gm14252	ENSMUST00000131801	antisense		2	-1	156339381	3215
ENSMUSG00000020775	protein_coding	Mrpl38	ENSMUST00000124722	retained_intron		11	-1	116134627	241
ENSMUSG00000060733	protein_coding	Ipmk	ENSMUST00000145521	processed_transcript		10	1	71409363	522
ENSMUSG00000060733	protein_coding	Ipmk	ENSMUST00000141153	retained_intron		10	1	71347843	679
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000221634	protein_coding		13	-1	64274988	1953
ENSMUSG00000024546	lincRNA	4930546C10Rik	ENSMUST00000236143	lincRNA		18	-1	68951528	2322
ENSMUSG00000020775	protein_coding	Mrpl38	ENSMUST00000138457	retained_intron		11	-1	116138865	995
ENSMUSG00000024546	lincRNA	4930546C10Rik	ENSMUST00000025428	lincRNA		18	-1	68950141	363
ENSMUSG00000083551	processed_pseudogene	Gm14516	ENSMUST00000120012	processed_pseudogene		X	-1	16379647	252
ENSMUSG00000031729	protein_coding	Ist1	ENSMUST00000034164	protein_coding	principal1	8	-1	109693260	2304
ENSMUSG00000051832	processed_transcript	E230016K23Rik	ENSMUST00000125626	processed_transcript		11	1	83582056	2139
ENSMUSG00000051832	processed_transcript	E230016K23Rik	ENSMUST00000141082	processed_transcript		11	1	83582084	861
ENSMUSG00000051832	processed_transcript	E230016K23Rik	ENSMUST00000171408	processed_transcript		11	1	83621662	510
ENSMUSG00000034055	protein_coding	Phka1	ENSMUST00000142534	retained_intron		X	-1	102644246	2799
ENSMUSG00000034055	protein_coding	Phka1	ENSMUST00000113611	protein_coding	alternative2	X	-1	102644246	6064
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000100168	protein_coding		15	1	102518357	1278
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000136968	retained_intron		15	1	102518427	2732
ENSMUSG00000023257	protein_coding	Cypt1	ENSMUST00000115422	protein_coding	alternative2	X	1	16522869	661
ENSMUSG00000043226	protein_coding	Olfr1009	ENSMUST00000216443	protein_coding	principal1	2	1	85715419	4047
ENSMUSG00000043226	protein_coding	Olfr1009	ENSMUST00000213600	processed_transcript		2	1	85715497	1778
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000229805	protein_coding		15	1	102518439	377
ENSMUSG00000054942	protein_coding	Miga1	ENSMUST00000073089	protein_coding	principal1	3	-1	152340407	4965
ENSMUSG00000043226	protein_coding	Olfr1009	ENSMUST00000055517	protein_coding	principal1	2	1	85721407	945
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000150393	protein_coding		15	1	102518455	489
ENSMUSG00000005881	protein_coding	Ergic3	ENSMUST00000006035	protein_coding	principal1	2	1	156008045	1377
ENSMUSG00000031729	protein_coding	Ist1	ENSMUST00000212562	retained_intron		8	-1	109693247	6990
ENSMUSG00000031729	protein_coding	Ist1	ENSMUST00000212973	retained_intron		8	-1	109693260	3633
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000033776	protein_coding	principal1	X	1	75095854	2804
ENSMUSG00000005881	protein_coding	Ergic3	ENSMUST00000088650	protein_coding		2	1	156008106	1349
ENSMUSG00000054942	protein_coding	Miga1	ENSMUST00000068243	protein_coding		3	-1	152340405	2689
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000131155	protein_coding		X	1	75096053	839
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000110876	protein_coding	principal3	8	1	12915893	5253
ENSMUSG00000023257	protein_coding	Cypt1	ENSMUST00000024026	protein_coding	principal3	X	1	16522872	672
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000132000	protein_coding		X	1	75096086	462
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000039318	protein_coding	principal3	13	-1	64274988	5859
ENSMUSG00000054942	protein_coding	Miga1	ENSMUST00000199334	protein_coding		3	-1	152340383	4024
ENSMUSG00000005881	protein_coding	Ergic3	ENSMUST00000144707	retained_intron		2	1	156008223	649
ENSMUSG00000031729	protein_coding	Ist1	ENSMUST00000212170	processed_transcript		8	-1	109677594	1280
ENSMUSG00000054942	protein_coding	Miga1	ENSMUST00000199872	retained_intron		3	-1	152285551	3808
ENSMUSG00000005881	protein_coding	Ergic3	ENSMUST00000142859	protein_coding		2	1	156008619	739
ENSMUSG00000054942	protein_coding	Miga1	ENSMUST00000199443	protein_coding		3	-1	152317715	432
ENSMUSG00000083288	processed_pseudogene	Csnk2a1-ps	ENSMUST00000118846	processed_pseudogene		X	1	16610252	1175
ENSMUSG00000005881	protein_coding	Ergic3	ENSMUST00000155370	protein_coding		2	1	156010447	751
ENSMUSG00000054942	protein_coding	Miga1	ENSMUST00000199963	retained_intron		3	-1	152297630	569
ENSMUSG00000001416	protein_coding	Cct3	ENSMUST00000001452	protein_coding	principal1	3	1	88297116	1977
ENSMUSG00000054942	protein_coding	Miga1	ENSMUST00000196265	nonsense_mediated_decay		3	-1	152337934	827
ENSMUSG00000001416	protein_coding	Cct3	ENSMUST00000193666	retained_intron		3	1	88297117	1831
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000023813	protein_coding	principal1	15	1	102518459	1523
ENSMUSG00000005881	protein_coding	Ergic3	ENSMUST00000150970	processed_transcript		2	1	156016509	463
ENSMUSG00000005881	protein_coding	Ergic3	ENSMUST00000130793	processed_transcript		2	1	156017215	382
ENSMUSG00000054942	protein_coding	Miga1	ENSMUST00000199397	protein_coding		3	-1	152340373	2842
ENSMUSG00000029470	protein_coding	P2rx4	ENSMUST00000031429	protein_coding	principal1	5	1	122707544	2702
ENSMUSG00000005881	protein_coding	Ergic3	ENSMUST00000152568	retained_intron		2	1	156017494	488
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000156405	processed_transcript		8	1	12915911	951
ENSMUSG00000054942	protein_coding	Miga1	ENSMUST00000200241	retained_intron		3	-1	152340384	697
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000135389	retained_intron		X	1	75096099	898
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000154451	retained_intron		15	1	102518498	704
ENSMUSG00000005881	protein_coding	Ergic3	ENSMUST00000137545	retained_intron		2	1	156017546	654
ENSMUSG00000045817	protein_coding	Zfp36l2	ENSMUST00000060366	protein_coding	principal1	17	-1	84187947	3530
ENSMUSG00000005881	protein_coding	Ergic3	ENSMUST00000149381	retained_intron		2	1	156017648	412
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000131867	processed_transcript		X	1	75096101	541
ENSMUSG00000029470	protein_coding	P2rx4	ENSMUST00000195963	retained_intron		5	1	122707569	3895
ENSMUSG00000115085	processed_pseudogene	Gm9198	ENSMUST00000226196	processed_pseudogene		14	-1	72979904	1279
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000154948	nonsense_mediated_decay		15	1	102518557	951
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000221139	nonsense_mediated_decay		13	-1	64274879	3075
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000134033	retained_intron		15	1	102518568	713
ENSMUSG00000117393	antisense	Gm36279	ENSMUST00000234321	antisense		17	1	84185756	365
ENSMUSG00000033981	protein_coding	Gria2	ENSMUST00000194383	retained_intron		3	-1	80802791	3462
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000146756	protein_coding		15	1	102518726	1081
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000140609	nonsense_mediated_decay		X	1	75096115	754
ENSMUSG00000029470	protein_coding	P2rx4	ENSMUST00000152337	retained_intron		5	1	122707570	711
ENSMUSG00000033981	protein_coding	Gria2	ENSMUST00000193645	retained_intron		3	-1	80802650	4799
ENSMUSG00000033981	protein_coding	Gria2	ENSMUST00000194523	retained_intron		3	-1	80802724	2719
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000131329	processed_transcript		4	1	134102570	717
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000145222	retained_intron		X	1	75096546	592
ENSMUSG00000033981	protein_coding	Gria2	ENSMUST00000195062	retained_intron		3	-1	80802780	1975
ENSMUSG00000029470	protein_coding	P2rx4	ENSMUST00000198560	nonsense_mediated_decay		5	1	122707580	810
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000149200	nonsense_mediated_decay		15	1	102518799	482
ENSMUSG00000033981	protein_coding	Gria2	ENSMUST00000194164	retained_intron		3	-1	80802693	2147
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000109769	protein_coding	alternative2	13	-1	64248642	2886
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000142194	protein_coding		15	1	102518802	782
ENSMUSG00000029470	protein_coding	P2rx4	ENSMUST00000081554	protein_coding		5	1	122707584	1887
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000151327	retained_intron		X	1	75099918	963
ENSMUSG00000033470	protein_coding	Cysltr2	ENSMUST00000228154	retained_intron		14	-1	73026159	557
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000110879	protein_coding	alternative2	8	1	12915975	3664
ENSMUSG00000023051	protein_coding	Tarbp2	ENSMUST00000153171	retained_intron		15	1	102521040	707
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000221788	retained_intron		13	-1	64197924	2565
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000153844	nonsense_mediated_decay		X	1	75100053	657
ENSMUSG00000029470	protein_coding	P2rx4	ENSMUST00000139631	protein_coding		5	1	122707654	1030
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000222713	protein_coding		13	-1	64210258	790
ENSMUSG00000011589	protein_coding	Fsd1	ENSMUST00000233772	processed_transcript		17	1	55986509	406
ENSMUSG00000000730	protein_coding	Dnmt3l	ENSMUST00000138785	protein_coding	principal1	10	1	78042287	1822
ENSMUSG00000029470	protein_coding	P2rx4	ENSMUST00000142664	protein_coding		5	1	122707654	1111
ENSMUSG00000032952	protein_coding	Ap4b1	ENSMUST00000076599	protein_coding	principal1	3	1	103809520	2692
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000098927	protein_coding		8	1	12926632	3215
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000154936	processed_transcript		X	1	75100259	668
ENSMUSG00000001416	protein_coding	Cct3	ENSMUST00000167000	retained_intron		3	1	88297123	3335
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000221217	nonsense_mediated_decay		13	-1	64209182	628
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000154422	processed_transcript		X	1	75100948	551
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000238472	protein_coding		8	1	12931662	419
ENSMUSG00000032952	protein_coding	Ap4b1	ENSMUST00000106824	protein_coding		3	1	103809593	2412
ENSMUSG00000116991	processed_pseudogene	Gm6032	ENSMUST00000231489	processed_pseudogene		16	-1	84514188	1138
ENSMUSG00000000730	protein_coding	Dnmt3l	ENSMUST00000000746	protein_coding	principal1	10	1	78049842	1676
ENSMUSG00000031403	protein_coding	Dkc1	ENSMUST00000137286	retained_intron		X	1	75105949	610
ENSMUSG00000029470	protein_coding	P2rx4	ENSMUST00000132062	retained_intron		5	1	122724655	513
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000130302	retained_intron		8	1	12947919	3760
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000222766	protein_coding		13	-1	64209982	474
ENSMUSG00000029470	protein_coding	P2rx4	ENSMUST00000139712	processed_transcript		5	1	122727664	476
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000110871	protein_coding		8	1	12947953	3401
ENSMUSG00000001416	protein_coding	Cct3	ENSMUST00000164783	retained_intron		3	1	88297126	1932
ENSMUSG00000000730	protein_coding	Dnmt3l	ENSMUST00000151242	protein_coding	principal1	10	1	78049959	1657
ENSMUSG00000034636	protein_coding	Zyg11b	ENSMUST00000043616	protein_coding	principal1	4	-1	108301096	8691
ENSMUSG00000001416	protein_coding	Cct3	ENSMUST00000167718	retained_intron		3	1	88297153	2056
ENSMUSG00000032952	protein_coding	Ap4b1	ENSMUST00000106823	protein_coding		3	1	103809600	2741
ENSMUSG00000034636	protein_coding	Zyg11b	ENSMUST00000130508	processed_transcript		4	-1	108242038	447
ENSMUSG00000040258	protein_coding	Nxph4	ENSMUST00000095266	protein_coding	principal1	10	-1	127534559	1675
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000110867	protein_coding	alternative2	8	1	12949416	3864
ENSMUSG00000001416	protein_coding	Cct3	ENSMUST00000164166	protein_coding		3	1	88297174	1804
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000223116	processed_transcript		13	-1	64212282	752
ENSMUSG00000038085	protein_coding	Cnbd2	ENSMUST00000037096	protein_coding	principal2	2	1	156312299	2277
ENSMUSG00000115765	processed_pseudogene	Gm19227	ENSMUST00000228138	processed_pseudogene		15	1	7779036	1011
ENSMUSG00000001416	protein_coding	Cct3	ENSMUST00000168062	protein_coding		3	1	88297188	1943
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000221437	retained_intron		13	-1	64275290	2841
ENSMUSG00000000730	protein_coding	Dnmt3l	ENSMUST00000144446	retained_intron		10	1	78054835	409
ENSMUSG00000001416	protein_coding	Cct3	ENSMUST00000163735	protein_coding		3	1	88302838	919
ENSMUSG00000033102	protein_coding	Cdc14b	ENSMUST00000109770	protein_coding	principal3	13	-1	64274879	3052
ENSMUSG00000110358	protein_coding	A730009L09Rik	ENSMUST00000209558	protein_coding	principal5	16	1	84515121	2512
ENSMUSG00000038085	protein_coding	Cnbd2	ENSMUST00000125395	processed_transcript		2	1	156312578	585
ENSMUSG00000110358	protein_coding	A730009L09Rik	ENSMUST00000210306	protein_coding	alternative2	16	1	84515369	201
ENSMUSG00000083957	processed_pseudogene	Gm12742	ENSMUST00000117326	processed_pseudogene		4	-1	108311151	410
ENSMUSG00000001416	protein_coding	Cct3	ENSMUST00000164122	retained_intron		3	1	88320995	472
ENSMUSG00000038085	protein_coding	Cnbd2	ENSMUST00000073942	protein_coding	alternative2	2	1	156312592	1758
ENSMUSG00000001416	protein_coding	Cct3	ENSMUST00000168971	protein_coding		3	1	88321048	474
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000110866	protein_coding	alternative2	8	1	12949484	5108
ENSMUSG00000038085	protein_coding	Cnbd2	ENSMUST00000133056	retained_intron		2	1	156312617	1103
ENSMUSG00000000730	protein_coding	Dnmt3l	ENSMUST00000131825	protein_coding		10	1	78055335	1113
ENSMUSG00000038085	protein_coding	Cnbd2	ENSMUST00000109580	protein_coding	alternative2	2	1	156312633	1910
ENSMUSG00000021482	protein_coding	Prxl2c	ENSMUST00000221399	processed_transcript		13	-1	64279724	682
ENSMUSG00000075100	protein_coding	Olfr1223	ENSMUST00000217342	protein_coding	principal1	2	-1	89151560	2333
ENSMUSG00000000730	protein_coding	Dnmt3l	ENSMUST00000139539	protein_coding		10	1	78055335	1279
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000110873	protein_coding		8	1	12984276	3169
ENSMUSG00000038085	protein_coding	Cnbd2	ENSMUST00000154227	processed_transcript		2	1	156333861	613
ENSMUSG00000081734	processed_pseudogene	Gm12740	ENSMUST00000118794	processed_pseudogene		4	1	108322338	308
ENSMUSG00000000730	protein_coding	Dnmt3l	ENSMUST00000123940	protein_coding		10	1	78055335	1452
ENSMUSG00000038545	protein_coding	Cul7	ENSMUST00000043464	protein_coding	principal1	17	1	46650337	5530
ENSMUSG00000116599	processed_pseudogene	Gm2477	ENSMUST00000231673	processed_pseudogene		16	-1	84601206	554
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000173006	protein_coding		8	1	12984281	2500
ENSMUSG00000020721	protein_coding	Helz	ENSMUST00000100305	protein_coding	alternative2	11	1	107547956	5953
ENSMUSG00000032952	protein_coding	Ap4b1	ENSMUST00000047285	protein_coding	principal1	3	1	103809628	2799
ENSMUSG00000038545	protein_coding	Cul7	ENSMUST00000151002	retained_intron		17	1	46650563	3010
ENSMUSG00000116583	processed_pseudogene	Gm2349	ENSMUST00000231563	processed_pseudogene		16	1	84647373	478
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000145067	protein_coding	alternative2	8	1	12984296	5313
ENSMUSG00000032952	protein_coding	Ap4b1	ENSMUST00000200377	protein_coding		3	1	103809836	1823
ENSMUSG00000038545	protein_coding	Cul7	ENSMUST00000132790	retained_intron		17	1	46650572	3056
ENSMUSG00000075099	protein_coding	Olfr1224-ps1	ENSMUST00000216833	protein_coding	principal1	2	-1	89160407	2294
ENSMUSG00000032952	protein_coding	Ap4b1	ENSMUST00000199723	processed_transcript		3	1	103809864	594
ENSMUSG00000075099	protein_coding	Olfr1224-ps1	ENSMUST00000214069	processed_transcript		2	-1	89160407	2175
ENSMUSG00000032952	protein_coding	Ap4b1	ENSMUST00000199686	nonsense_mediated_decay		3	1	103815058	563
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000126905	protein_coding		8	1	13000759	4061
ENSMUSG00000075099	protein_coding	Olfr1224-ps1	ENSMUST00000216913	processed_transcript		2	-1	89160428	1889
ENSMUSG00000049760	protein_coding	Micos13	ENSMUST00000052832	protein_coding	principal1	17	-1	56609771	755
ENSMUSG00000075099	protein_coding	Olfr1224-ps1	ENSMUST00000216976	protein_coding	principal1	2	-1	89160495	2019
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000123811	protein_coding		8	1	13011494	2390
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000134227	protein_coding		8	1	13011510	761
ENSMUSG00000105053	protein_coding	Gm43064	ENSMUST00000199710	nonsense_mediated_decay	principal1	3	1	103809573	3144
ENSMUSG00000049760	protein_coding	Micos13	ENSMUST00000233103	processed_transcript		17	-1	56609198	497
ENSMUSG00000011589	protein_coding	Fsd1	ENSMUST00000011733	protein_coding	principal1	17	1	55986511	1748
ENSMUSG00000049760	protein_coding	Micos13	ENSMUST00000233299	processed_transcript		17	-1	56609680	788
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000145892	protein_coding		8	1	13011818	452
ENSMUSG00000075099	protein_coding	Olfr1224-ps1	ENSMUST00000099793	protein_coding	principal1	2	-1	89164091	1212
ENSMUSG00000025037	protein_coding	Maoa	ENSMUST00000026013	protein_coding	principal1	X	1	16619698	4167
ENSMUSG00000117020	unprocessed_pseudogene	Gm49845	ENSMUST00000232752	unprocessed_pseudogene		17	1	40487473	330
ENSMUSG00000033470	protein_coding	Cysltr2	ENSMUST00000226727	processed_transcript		14	-1	73049114	737
ENSMUSG00000032186	protein_coding	Tmod2	ENSMUST00000098552	protein_coding	principal1	9	-1	75611303	9871
ENSMUSG00000049760	protein_coding	Micos13	ENSMUST00000233235	processed_transcript		17	-1	56609002	327
ENSMUSG00000075099	protein_coding	Olfr1224-ps1	ENSMUST00000099792	protein_coding	principal1	2	-1	89157173	936
ENSMUSG00000011589	protein_coding	Fsd1	ENSMUST00000233149	retained_intron		17	1	55986513	416
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000127229	retained_intron		8	1	13013062	666
ENSMUSG00000049760	protein_coding	Micos13	ENSMUST00000233386	retained_intron		17	-1	56609682	303
ENSMUSG00000117057	unprocessed_pseudogene	Gm49846	ENSMUST00000232763	unprocessed_pseudogene		17	1	40499770	447
ENSMUSG00000020721	protein_coding	Helz	ENSMUST00000106746	protein_coding	alternative2	11	1	107547968	13147
ENSMUSG00000032186	protein_coding	Tmod2	ENSMUST00000064433	protein_coding	principal1	9	-1	75611325	9884
ENSMUSG00000115117	processed_pseudogene	Gm18094	ENSMUST00000227514	processed_pseudogene		15	1	57429984	730
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000139776	protein_coding		8	1	13013561	565
ENSMUSG00000011589	protein_coding	Fsd1	ENSMUST00000232915	retained_intron		17	1	55986515	709
ENSMUSG00000033470	protein_coding	Cysltr2	ENSMUST00000044664	protein_coding	principal1	14	-1	73049072	1760
ENSMUSG00000020721	protein_coding	Helz	ENSMUST00000133862	protein_coding		11	1	107627321	3753
ENSMUSG00000031442	protein_coding	Mcf2l	ENSMUST00000134989	retained_intron		8	1	13017176	718
ENSMUSG00000115226	processed_pseudogene	Gm49229	ENSMUST00000226272	processed_pseudogene		15	1	57347749	342
ENSMUSG00000038545	protein_coding	Cul7	ENSMUST00000145567	nonsense_mediated_decay		17	1	46651423	5016
ENSMUSG00000032186	protein_coding	Tmod2	ENSMUST00000215614	protein_coding	principal1	9	-1	75611170	1921
ENSMUSG00000020721	protein_coding	Helz	ENSMUST00000143634	processed_transcript		11	1	107634501	937
ENSMUSG00000020721	protein_coding	Helz	ENSMUST00000154847	processed_transcript		11	1	107671052	859
ENSMUSG00000011589	protein_coding	Fsd1	ENSMUST00000233973	retained_intron		17	1	55995410	306
ENSMUSG00000038545	protein_coding	Cul7	ENSMUST00000144966	processed_transcript		17	1	46652851	628
ENSMUSG00000117265	TEC	Gm49847	ENSMUST00000233166	TEC		17	-1	40525059	4903
ENSMUSG00000057863	protein_coding	Rpl36	ENSMUST00000080492	protein_coding	principal1	17	1	56613416	383
ENSMUSG00000033470	protein_coding	Cysltr2	ENSMUST00000169168	protein_coding	principal1	14	-1	73049114	1744
ENSMUSG00000011589	protein_coding	Fsd1	ENSMUST00000233361	processed_transcript		17	1	55996297	266
ENSMUSG00000020721	protein_coding	Helz	ENSMUST00000153080	processed_transcript		11	1	107672960	553
ENSMUSG00000038545	protein_coding	Cul7	ENSMUST00000133393	nonsense_mediated_decay		17	1	46652893	4047
ENSMUSG00000033470	protein_coding	Cysltr2	ENSMUST00000228821	retained_intron		14	-1	73049114	650
ENSMUSG00000038545	protein_coding	Cul7	ENSMUST00000125949	retained_intron		17	1	46661787	1321
ENSMUSG00000032186	protein_coding	Tmod2	ENSMUST00000164100	protein_coding	principal1	9	-1	75597651	1528
ENSMUSG00000022144	protein_coding	Gdnf	ENSMUST00000022744	protein_coding	principal1	15	1	7810846	3674
ENSMUSG00000090747	protein_coding	Esp8	ENSMUST00000171813	protein_coding	principal1	17	1	40520022	620
ENSMUSG00000060733	protein_coding	Ipmk	ENSMUST00000079252	protein_coding	principal3	10	1	71347763	5447
ENSMUSG00000084097	processed_pseudogene	Gm14922	ENSMUST00000121131	processed_pseudogene		X	-1	112774115	163
ENSMUSG00000020721	protein_coding	Helz	ENSMUST00000075012	protein_coding	principal2	11	1	107547960	6218
ENSMUSG00000082636	processed_pseudogene	Gm14923	ENSMUST00000118270	processed_pseudogene		X	1	112774104	155
ENSMUSG00000117562	lincRNA	Gm50000	ENSMUST00000234078	lincRNA		17	-1	31899178	1071
ENSMUSG00000032186	protein_coding	Tmod2	ENSMUST00000215036	protein_coding	principal1	9	-1	75599168	1797
ENSMUSG00000081555	processed_pseudogene	Gm6427	ENSMUST00000118721	processed_pseudogene		X	1	112791142	979
ENSMUSG00000117879	lincRNA	2310015A16Rik	ENSMUST00000235350	lincRNA		17	-1	31909029	773
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000114548	protein_coding	alternative1	9	1	47530173	4482
ENSMUSG00000032186	protein_coding	Tmod2	ENSMUST00000215462	protein_coding		9	-1	75611121	1564
ENSMUSG00000021482	protein_coding	Prxl2c	ENSMUST00000221118	protein_coding		13	-1	64312593	615
ENSMUSG00000021482	protein_coding	Prxl2c	ENSMUST00000221350	protein_coding		13	-1	64312593	524
ENSMUSG00000060733	protein_coding	Ipmk	ENSMUST00000118381	protein_coding		10	1	71347836	1323
ENSMUSG00000032186	protein_coding	Tmod2	ENSMUST00000214581	retained_intron		9	-1	75599168	1187
ENSMUSG00000060733	protein_coding	Ipmk	ENSMUST00000147277	nonsense_mediated_decay		10	1	71347836	1862
ENSMUSG00000090553	protein_coding	Snrpe	ENSMUST00000166915	protein_coding	principal1	1	-1	133610291	503
ENSMUSG00000032186	protein_coding	Tmod2	ENSMUST00000213565	protein_coding		9	-1	75611075	727
ENSMUSG00000021482	protein_coding	Prxl2c	ENSMUST00000222286	retained_intron		13	-1	64312543	666
ENSMUSG00000060733	protein_coding	Ipmk	ENSMUST00000121446	protein_coding	alternative2	10	1	71347836	1492
ENSMUSG00000090553	protein_coding	Snrpe	ENSMUST00000166291	protein_coding		1	-1	133610232	360
ENSMUSG00000032186	protein_coding	Tmod2	ENSMUST00000217233	protein_coding		9	-1	75611140	446
ENSMUSG00000103098	processed_pseudogene	Gm37559	ENSMUST00000193556	processed_pseudogene		1	-1	165613890	832
ENSMUSG00000060733	protein_coding	Ipmk	ENSMUST00000141984	nonsense_mediated_decay		10	1	71381749	600
ENSMUSG00000116309	lincRNA	Gm49418	ENSMUST00000230405	lincRNA		15	1	92933889	616
ENSMUSG00000090553	protein_coding	Snrpe	ENSMUST00000172079	nonsense_mediated_decay		1	-1	133610047	653
ENSMUSG00000008305	protein_coding	Tle1	ENSMUST00000072695	protein_coding	principal2	4	-1	72200857	3644
ENSMUSG00000090553	protein_coding	Snrpe	ENSMUST00000164096	protein_coding		1	-1	133610249	669
ENSMUSG00000024251	protein_coding	Thada	ENSMUST00000047524	protein_coding	principal1	17	-1	84466116	7784
ENSMUSG00000116242	processed_pseudogene	Gm18815	ENSMUST00000230575	processed_pseudogene		15	1	92968815	1483
ENSMUSG00000090553	protein_coding	Snrpe	ENSMUST00000171264	protein_coding		1	-1	133609925	75
ENSMUSG00000008305	protein_coding	Tle1	ENSMUST00000107337	protein_coding		4	-1	72200862	2067
ENSMUSG00000109770	lincRNA	Gm30085	ENSMUST00000209694	lincRNA		15	1	93001824	594
ENSMUSG00000109770	lincRNA	Gm30085	ENSMUST00000209724	lincRNA		15	1	93002332	198
ENSMUSG00000090553	protein_coding	Snrpe	ENSMUST00000164574	protein_coding		1	-1	133610215	597
ENSMUSG00000008305	protein_coding	Tle1	ENSMUST00000140154	protein_coding		4	-1	72141313	501
ENSMUSG00000031966	protein_coding	Glb1l3	ENSMUST00000210274	protein_coding	principal2	9	-1	26860890	2532
ENSMUSG00000021482	protein_coding	Prxl2c	ENSMUST00000222570	protein_coding	principal1	13	-1	64312710	3011
ENSMUSG00000022366	protein_coding	Slc22a22	ENSMUST00000022995	protein_coding	principal1	15	-1	57265161	2015
ENSMUSG00000105597	TEC	4633401B06Rik	ENSMUST00000198169	TEC		3	-1	121788572	1073
ENSMUSG00000112850	processed_pseudogene	Gm9176	ENSMUST00000219955	processed_pseudogene		10	-1	128550813	1120
ENSMUSG00000115921	processed_pseudogene	Gm18685	ENSMUST00000229620	processed_pseudogene		15	1	93089230	693
ENSMUSG00000031966	protein_coding	Glb1l3	ENSMUST00000211353	processed_transcript		9	-1	26824344	441
ENSMUSG00000021482	protein_coding	Prxl2c	ENSMUST00000220895	protein_coding		13	-1	64312710	2858
ENSMUSG00000022366	protein_coding	Slc22a22	ENSMUST00000110196	protein_coding	principal1	15	-1	57477625	2368
ENSMUSG00000031966	protein_coding	Glb1l3	ENSMUST00000209592	processed_transcript		9	-1	26829492	591
ENSMUSG00000008305	protein_coding	Tle1	ENSMUST00000134225	processed_transcript		4	-1	72200893	3200
ENSMUSG00000021482	protein_coding	Prxl2c	ENSMUST00000021938	protein_coding		13	-1	64312574	791
ENSMUSG00000116124	processed_transcript	Gm49420	ENSMUST00000229929	lincRNA		15	-1	93137594	418
ENSMUSG00000024251	protein_coding	Thada	ENSMUST00000234547	processed_transcript		17	-1	84368780	2556
ENSMUSG00000038781	protein_coding	Stap2	ENSMUST00000043785	protein_coding	principal1	17	-1	56005584	1509
ENSMUSG00000116124	processed_transcript	Gm49420	ENSMUST00000230014	retained_intron		15	-1	93137542	669
ENSMUSG00000024251	protein_coding	Thada	ENSMUST00000234529	retained_intron		17	-1	84229860	608
ENSMUSG00000022366	protein_coding	Slc22a22	ENSMUST00000137764	protein_coding		15	-1	57265137	590
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000129210	protein_coding		2	-1	165286552	728
ENSMUSG00000113804	processed_pseudogene	Gm46424	ENSMUST00000221567	processed_pseudogene		13	1	64210523	168
ENSMUSG00000056698	protein_coding	Elmod3	ENSMUST00000114069	protein_coding	principal2	6	-1	72598342	2164
ENSMUSG00000024251	protein_coding	Thada	ENSMUST00000234724	retained_intron		17	-1	84435688	4412
ENSMUSG00000008305	protein_coding	Tle1	ENSMUST00000132550	retained_intron		4	-1	72199092	3773
ENSMUSG00000097989	processed_pseudogene	Gm4335	ENSMUST00000182581	processed_pseudogene		15	1	93196595	1004
ENSMUSG00000031257	protein_coding	Nox1	ENSMUST00000033610	protein_coding	principal1	X	-1	134111854	2563
ENSMUSG00000024251	protein_coding	Thada	ENSMUST00000234134	processed_transcript		17	-1	84336874	570
ENSMUSG00000056698	protein_coding	Elmod3	ENSMUST00000070990	protein_coding	principal2	6	-1	72598343	2122
ENSMUSG00000116674	lincRNA	4930551I23Rik	ENSMUST00000231907	lincRNA		16	1	84686476	976
ENSMUSG00000031966	protein_coding	Glb1l3	ENSMUST00000034448	protein_coding	alternative2	9	-1	26860823	2468
ENSMUSG00000024251	protein_coding	Thada	ENSMUST00000235126	processed_transcript		17	-1	84313679	445
ENSMUSG00000008305	protein_coding	Tle1	ENSMUST00000102848	protein_coding		4	-1	72200854	3660
ENSMUSG00000031257	protein_coding	Nox1	ENSMUST00000113275	protein_coding		X	-1	134111765	1694
ENSMUSG00000038781	protein_coding	Stap2	ENSMUST00000233494	retained_intron		17	-1	56005573	1597
ENSMUSG00000056698	protein_coding	Elmod3	ENSMUST00000141833	protein_coding	alternative2	6	-1	72598395	2509
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000074690	protein_coding	principal2	4	1	134102583	1573
ENSMUSG00000038781	protein_coding	Stap2	ENSMUST00000233528	retained_intron		17	-1	55998480	906
ENSMUSG00000024251	protein_coding	Thada	ENSMUST00000234313	retained_intron		17	-1	84466205	2397
ENSMUSG00000097418	lincRNA	Mir155hg	ENSMUST00000185662	lincRNA		16	1	84703167	1362
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000152459	protein_coding	alternative1	9	1	47530211	1784
ENSMUSG00000008305	protein_coding	Tle1	ENSMUST00000137075	protein_coding		4	-1	72199492	589
ENSMUSG00000097418	lincRNA	Mir155hg	ENSMUST00000180991	lincRNA		16	1	84713023	1264
ENSMUSG00000031402	protein_coding	Mpp1	ENSMUST00000033775	protein_coding	principal1	X	-1	75131016	2525
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000142442	processed_transcript		4	1	134102603	2207
ENSMUSG00000031257	protein_coding	Nox1	ENSMUST00000162833	protein_coding		X	-1	134221956	696
ENSMUSG00000056698	protein_coding	Elmod3	ENSMUST00000148108	protein_coding		6	-1	72598361	773
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000143026	protein_coding		9	1	47530244	2121
ENSMUSG00000038781	protein_coding	Stap2	ENSMUST00000233977	retained_intron		17	-1	56005552	1485
ENSMUSG00000031257	protein_coding	Nox1	ENSMUST00000159231	protein_coding		X	-1	134137711	539
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000070246	protein_coding	alternative2	4	1	134102605	2014
ENSMUSG00000031402	protein_coding	Mpp1	ENSMUST00000114092	protein_coding		X	-1	75130844	1378
ENSMUSG00000031257	protein_coding	Nox1	ENSMUST00000159259	protein_coding		X	-1	134111708	1581
ENSMUSG00000008305	protein_coding	Tle1	ENSMUST00000030095	protein_coding	alternative1	4	-1	72200152	2569
ENSMUSG00000056698	protein_coding	Elmod3	ENSMUST00000140825	processed_transcript		6	-1	72595021	464
ENSMUSG00000031402	protein_coding	Mpp1	ENSMUST00000114091	protein_coding		X	-1	75130949	1558
ENSMUSG00000032184	protein_coding	Lysmd2	ENSMUST00000034702	protein_coding	principal1	9	1	75625741	1189
ENSMUSG00000056698	protein_coding	Elmod3	ENSMUST00000152705	protein_coding		6	-1	72598413	489
ENSMUSG00000031402	protein_coding	Mpp1	ENSMUST00000132501	protein_coding		X	-1	75130854	645
ENSMUSG00000008305	protein_coding	Tle1	ENSMUST00000123259	processed_transcript		4	-1	72120734	844
ENSMUSG00000015484	protein_coding	Fam163a	ENSMUST00000015628	protein_coding	principal1	1	-1	156205026	3882
ENSMUSG00000031402	protein_coding	Mpp1	ENSMUST00000132935	processed_transcript		X	-1	75130854	232
ENSMUSG00000032184	protein_coding	Lysmd2	ENSMUST00000214961	nonsense_mediated_decay		9	1	75625759	695
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000156323	processed_transcript		4	1	134102615	1419
ENSMUSG00000027522	protein_coding	Stx16	ENSMUST00000155000	protein_coding		2	1	174076308	356
ENSMUSG00000031402	protein_coding	Mpp1	ENSMUST00000135285	retained_intron		X	-1	75117848	420
ENSMUSG00000102932	processed_pseudogene	Gm38113	ENSMUST00000193704	processed_pseudogene		1	-1	156227293	201
ENSMUSG00000110211	lincRNA	Gm31294	ENSMUST00000211216	lincRNA		18	-1	69195744	138
ENSMUSG00000031402	protein_coding	Mpp1	ENSMUST00000153318	protein_coding		X	-1	75130854	497
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000156750	protein_coding		4	1	134102618	583
ENSMUSG00000027522	protein_coding	Stx16	ENSMUST00000134876	protein_coding		2	1	174076318	235
ENSMUSG00000025515	protein_coding	Muc2	ENSMUST00000185406	protein_coding		7	1	141690340	2690
ENSMUSG00000032184	protein_coding	Lysmd2	ENSMUST00000213292	processed_transcript		9	1	75626238	1241
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000127632	processed_transcript		4	1	134102619	798
ENSMUSG00000031402	protein_coding	Mpp1	ENSMUST00000155742	protein_coding		X	-1	75130854	420
ENSMUSG00000008305	protein_coding	Tle1	ENSMUST00000074216	protein_coding	alternative1	4	-1	72200919	4369
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000085909	protein_coding	principal4	9	1	47530257	2126
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000123281	processed_transcript		4	1	134108349	249
ENSMUSG00000086027	antisense	Gm11250	ENSMUST00000142137	antisense		4	1	72168768	306
ENSMUSG00000042258	protein_coding	Isl1	ENSMUST00000036060	protein_coding	principal1	13	-1	116309689	2516
ENSMUSG00000025515	protein_coding	Muc2	ENSMUST00000185823	protein_coding		7	1	141699186	823
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000135287	processed_transcript		4	1	134112527	553
ENSMUSG00000031402	protein_coding	Mpp1	ENSMUST00000156975	retained_intron		X	-1	75130986	2849
ENSMUSG00000025515	protein_coding	Muc2	ENSMUST00000187789	protein_coding		7	1	141702097	241
ENSMUSG00000031402	protein_coding	Mpp1	ENSMUST00000127023	nonsense_mediated_decay		X	-1	75130953	368
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000139616	processed_transcript		4	1	134123469	399
ENSMUSG00000042258	protein_coding	Isl1	ENSMUST00000176044	protein_coding		13	-1	116309422	1198
ENSMUSG00000025515	protein_coding	Muc2	ENSMUST00000191587	protein_coding		7	1	141704165	447
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000151113	protein_coding		4	1	134124051	524
ENSMUSG00000036463	protein_coding	4930544G11Rik	ENSMUST00000043382	protein_coding	principal1	6	1	65952609	1406
ENSMUSG00000042258	protein_coding	Isl1	ENSMUST00000176444	retained_intron		13	-1	116303351	676
ENSMUSG00000097085	lincRNA	Gm26634	ENSMUST00000181146	lincRNA		15	-1	78868533	1570
ENSMUSG00000012126	protein_coding	Ubxn11	ENSMUST00000151407	processed_transcript		4	1	134125927	685
ENSMUSG00000042258	protein_coding	Isl1	ENSMUST00000176812	processed_transcript		13	-1	116306397	588
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000114547	protein_coding	alternative1	9	1	47530257	4444
ENSMUSG00000042258	protein_coding	Isl1	ENSMUST00000177469	retained_intron		13	-1	116309685	1864
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000148925	retained_intron		9	1	47530352	4767
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000081125	protein_coding	alternative2	2	1	181763332	5327
ENSMUSG00000028843	protein_coding	Sh3bgrl3	ENSMUST00000030651	protein_coding	principal1	4	-1	134128789	743
ENSMUSG00000025515	protein_coding	Muc2	ENSMUST00000187945	protein_coding		7	1	141744612	2926
ENSMUSG00000028843	protein_coding	Sh3bgrl3	ENSMUST00000105879	protein_coding		4	-1	134128739	518
ENSMUSG00000030089	protein_coding	Slc41a3	ENSMUST00000044019	protein_coding	principal4	6	1	90604725	2412
ENSMUSG00000025515	protein_coding	Muc2	ENSMUST00000026590	protein_coding	principal1	7	1	141746832	2032
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000033818	protein_coding	alternative2	8	1	12757014	7549
ENSMUSG00000068547	protein_coding	Clca4a	ENSMUST00000029923	protein_coding	alternative2	3	-1	144975045	3004
ENSMUSG00000104343	TEC	5730408A14Rik	ENSMUST00000194955	TEC		1	-1	175380676	1824
ENSMUSG00000025515	protein_coding	Muc2	ENSMUST00000179227	protein_coding		7	1	141695703	399
ENSMUSG00000028843	protein_coding	Sh3bgrl3	ENSMUST00000136408	retained_intron		4	-1	134128737	368
ENSMUSG00000025515	protein_coding	Muc2	ENSMUST00000167366	protein_coding		7	1	141699186	711
ENSMUSG00000030089	protein_coding	Slc41a3	ENSMUST00000032177	protein_coding	alternative2	6	1	90619147	2324
ENSMUSG00000068547	protein_coding	Clca4a	ENSMUST00000238960	protein_coding	principal2	3	-1	144975045	2998
ENSMUSG00000102653	TEC	Gm37079	ENSMUST00000194114	TEC		1	-1	4940710	2135
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000091237	protein_coding	principal3	8	1	12757016	7443
ENSMUSG00000106361	macro_lncRNA	Gm35066	ENSMUST00000198898	macro_lncRNA		3	1	144972124	2074
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000123756	retained_intron		16	-1	93603791	2408
ENSMUSG00000091305	processed_pseudogene	Gm17100	ENSMUST00000168963	processed_pseudogene		1	-1	4927299	272
ENSMUSG00000022579	protein_coding	Gpihbp1	ENSMUST00000189944	protein_coding		15	1	75596628	466
ENSMUSG00000025810	protein_coding	Nrp1	ENSMUST00000212833	retained_intron		8	1	128358604	2861
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000124073	retained_intron		9	1	47530352	1371
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000133338	nonsense_mediated_decay		8	1	12757069	4028
ENSMUSG00000085773	antisense	Gm16233	ENSMUST00000136170	antisense		3	1	144947561	1623
ENSMUSG00000110879	polymorphic_pseudogene	Olfr1010	ENSMUST00000216831	polymorphic_pseudogene	principal1	2	1	85748352	1270
ENSMUSG00000025810	protein_coding	Nrp1	ENSMUST00000212746	retained_intron		8	1	128359073	3645
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000239368	protein_coding		9	1	47530352	1937
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000125031	retained_intron		8	1	12811416	2295
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000214542	protein_coding		9	1	47530363	899
ENSMUSG00000027522	protein_coding	Stx16	ENSMUST00000147038	protein_coding		2	1	174076322	647
ENSMUSG00000022579	protein_coding	Gpihbp1	ENSMUST00000023243	protein_coding	principal1	15	1	75596630	825
ENSMUSG00000114621	lincRNA	Gm31107	ENSMUST00000223853	lincRNA		14	-1	68051330	640
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000127197	retained_intron		8	1	12822400	755
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000151624	processed_transcript		9	1	47530373	1112
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000155289	protein_coding		2	-1	165283600	830
ENSMUSG00000022579	protein_coding	Gpihbp1	ENSMUST00000189874	protein_coding		15	1	75596654	1652
ENSMUSG00000117335	bidirectional_promoter_lncRNA	Gm49870	ENSMUST00000232741	bidirectional_promoter_lncRNA		17	1	65885633	624
ENSMUSG00000117335	bidirectional_promoter_lncRNA	Gm49870	ENSMUST00000233862	bidirectional_promoter_lncRNA		17	1	65885893	481
ENSMUSG00000095895	processed_pseudogene	Gm21963	ENSMUST00000179519	processed_pseudogene		13	1	62778782	330
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000132974	protein_coding		8	1	12835165	5528
ENSMUSG00000117250	lincRNA	Gm49871	ENSMUST00000233078	lincRNA		17	1	65886420	1068
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000152273	protein_coding		8	1	12847855	692
ENSMUSG00000022579	protein_coding	Gpihbp1	ENSMUST00000190119	retained_intron		15	1	75596668	877
ENSMUSG00000091183	protein_coding	Gm5141	ENSMUST00000201047	protein_coding	principal1	13	-1	62785808	3279
ENSMUSG00000022579	protein_coding	Gpihbp1	ENSMUST00000186934	retained_intron		15	1	75596668	862
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000136918	processed_transcript		8	1	12849841	290
ENSMUSG00000091183	protein_coding	Gm5141	ENSMUST00000202582	retained_intron		13	-1	62785784	358
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000143359	protein_coding		8	1	12856960	604
ENSMUSG00000091183	protein_coding	Gm5141	ENSMUST00000167516	protein_coding		13	-1	62777089	1743
ENSMUSG00000032076	protein_coding	Cadm1	ENSMUST00000034581	protein_coding	alternative1	9	1	47530373	1254
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000131804	protein_coding		8	1	12857962	567
ENSMUSG00000031441	protein_coding	Atp11a	ENSMUST00000139545	retained_intron		8	1	12861565	811
ENSMUSG00000111155	TEC	Gm47197	ENSMUST00000216522	TEC		9	-1	47776737	2947
ENSMUSG00000022817	protein_coding	Itgb5	ENSMUST00000115028	protein_coding	principal1	16	1	33829665	3282
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000023669	protein_coding	principal1	16	-1	93603803	1816
ENSMUSG00000093622	lincRNA	Gm20703	ENSMUST00000175668	lincRNA		17	1	70834664	385
ENSMUSG00000079146	antisense	Gm15353	ENSMUST00000110860	antisense		8	-1	12883726	702
ENSMUSG00000025810	protein_coding	Nrp1	ENSMUST00000026917	protein_coding	principal1	8	1	128359284	3597
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000140619	processed_transcript		16	-1	93588441	946
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000156190	processed_transcript		2	1	181767029	642
ENSMUSG00000079146	antisense	Gm15353	ENSMUST00000149938	antisense		8	-1	12883716	375
ENSMUSG00000022817	protein_coding	Itgb5	ENSMUST00000069345	protein_coding		16	1	33829677	3056
ENSMUSG00000085465	antisense	Gm15347	ENSMUST00000145372	antisense		8	-1	12877344	385
ENSMUSG00000025810	protein_coding	Nrp1	ENSMUST00000212933	retained_intron		8	1	128359397	2770
ENSMUSG00000114536	antisense	Gm48837	ENSMUST00000224393	antisense		13	-1	112367845	2849
ENSMUSG00000036931	protein_coding	Nfkbid	ENSMUST00000108176	protein_coding		7	1	30421732	2014
ENSMUSG00000022817	protein_coding	Itgb5	ENSMUST00000134262	processed_transcript		16	1	33885026	631
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000132270	nonsense_mediated_decay		2	-1	165287824	1892
ENSMUSG00000022817	protein_coding	Itgb5	ENSMUST00000232262	protein_coding		16	1	33891941	2130
ENSMUSG00000101918	protein_coding	Olfr1225	ENSMUST00000216961	protein_coding	principal1	2	-1	89174669	3231
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000233981	retained_intron		16	-1	93586631	744
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000129336	protein_coding		2	-1	165283368	588
ENSMUSG00000049985	protein_coding	Ankrd55	ENSMUST00000225329	processed_transcript		13	1	112288451	1556
ENSMUSG00000084780	antisense	Gm15350	ENSMUST00000147398	antisense		8	-1	12831919	521
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000233453	retained_intron		16	-1	93587988	600
ENSMUSG00000101918	protein_coding	Olfr1225	ENSMUST00000217054	protein_coding	principal1	2	-1	89174642	5517
ENSMUSG00000022817	protein_coding	Itgb5	ENSMUST00000148462	processed_transcript		16	1	33891947	265
ENSMUSG00000084780	antisense	Gm15350	ENSMUST00000135138	antisense		8	-1	12833865	569
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000152520	retained_intron		16	-1	93589071	2617
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000145301	nonsense_mediated_decay		2	-1	165283600	786
ENSMUSG00000022817	protein_coding	Itgb5	ENSMUST00000151930	processed_transcript		16	1	33922486	364
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000233324	nonsense_mediated_decay		16	-1	93591089	934
ENSMUSG00000101918	protein_coding	Olfr1225	ENSMUST00000188861	protein_coding	principal1	2	-1	89171245	1027
ENSMUSG00000082682	processed_pseudogene	Gm15349	ENSMUST00000121154	processed_pseudogene		8	-1	12972029	204
ENSMUSG00000022817	protein_coding	Itgb5	ENSMUST00000231409	processed_transcript		16	1	33946524	297
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000154608	retained_intron		2	-1	165282223	775
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000232870	protein_coding		16	-1	93599281	1311
ENSMUSG00000036931	protein_coding	Nfkbid	ENSMUST00000108175	protein_coding	principal1	7	1	30422406	2000
ENSMUSG00000036931	protein_coding	Nfkbid	ENSMUST00000046177	protein_coding	principal1	7	1	30423275	2039
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000232835	protein_coding		16	-1	93585258	402
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000233912	retained_intron		16	-1	93584008	331
ENSMUSG00000036931	protein_coding	Nfkbid	ENSMUST00000153042	retained_intron		7	1	30425559	509
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000233517	processed_transcript		16	-1	93586609	467
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000233969	processed_transcript		16	-1	93587904	595
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000233419	retained_intron		16	-1	93593490	676
ENSMUSG00000107649	processed_pseudogene	Gm44404	ENSMUST00000203979	processed_pseudogene		6	-1	65983441	636
ENSMUSG00000069835	protein_coding	Sat2	ENSMUST00000108656	protein_coding	principal1	11	1	69622024	968
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000108756	protein_coding	principal3	2	1	181767042	5509
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000154355	protein_coding		16	-1	93603815	1064
ENSMUSG00000069835	protein_coding	Sat2	ENSMUST00000151255	retained_intron		11	1	69622052	1016
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000141789	processed_transcript		16	-1	93597416	539
ENSMUSG00000029036	protein_coding	Atad3a	ENSMUST00000030903	protein_coding	principal1	4	-1	155761093	2413
ENSMUSG00000069835	protein_coding	Sat2	ENSMUST00000092969	protein_coding	principal1	11	1	69622052	800
ENSMUSG00000108100	processed_pseudogene	Gm5876	ENSMUST00000203735	processed_pseudogene		6	1	65995637	243
ENSMUSG00000082744	processed_pseudogene	Gm15625	ENSMUST00000117617	processed_pseudogene		9	1	55305288	1093
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000156298	processed_transcript		16	-1	93604063	539
ENSMUSG00000022948	protein_coding	Setd4	ENSMUST00000233931	protein_coding	principal1	16	-1	93603815	1826
ENSMUSG00000036197	protein_coding	Gxylt1	ENSMUST00000049484	protein_coding	principal3	15	-1	93275161	6611
ENSMUSG00000029036	protein_coding	Atad3a	ENSMUST00000126725	retained_intron		4	-1	155746345	836
ENSMUSG00000117317	antisense	Gm49961	ENSMUST00000233219	antisense		16	1	93591401	495
ENSMUSG00000036197	protein_coding	Gxylt1	ENSMUST00000230063	protein_coding	alternative2	15	-1	93275179	4427
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000183403	nonsense_mediated_decay		2	1	181767303	649
ENSMUSG00000029036	protein_coding	Atad3a	ENSMUST00000176839	retained_intron		4	-1	155749343	497
ENSMUSG00000117980	TEC	Gm30571	ENSMUST00000237005	TEC		17	1	31912666	655
ENSMUSG00000029036	protein_coding	Atad3a	ENSMUST00000177066	retained_intron		4	-1	155749211	821
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000108757	protein_coding	alternative2	2	1	181767322	5115
ENSMUSG00000106414	TEC	Gm43320	ENSMUST00000196047	TEC		5	-1	48846335	2916
ENSMUSG00000036197	protein_coding	Gxylt1	ENSMUST00000057896	protein_coding	alternative2	15	-1	93275151	1891
ENSMUSG00000029036	protein_coding	Atad3a	ENSMUST00000175679	nonsense_mediated_decay		4	-1	155756067	728
ENSMUSG00000105974	TEC	Gm43318	ENSMUST00000199939	TEC		5	-1	48949969	1949
ENSMUSG00000101482	processed_pseudogene	Gm28883	ENSMUST00000189256	processed_pseudogene		1	1	135869782	369
ENSMUSG00000029036	protein_coding	Atad3a	ENSMUST00000184131	nonsense_mediated_decay		4	-1	155754767	654
ENSMUSG00000037188	protein_coding	Grhl3	ENSMUST00000105855	protein_coding	principal1	4	-1	135573630	2789
ENSMUSG00000048351	protein_coding	Coa7	ENSMUST00000131656	protein_coding	principal1	4	1	108328140	3714
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000223883	processed_transcript		2	1	181767512	325
ENSMUSG00000029036	protein_coding	Atad3a	ENSMUST00000184913	nonsense_mediated_decay		4	-1	155760928	773
ENSMUSG00000029089	protein_coding	5730480H06Rik	ENSMUST00000196604	processed_transcript		5	1	48327952	705
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000129856	protein_coding		2	1	181782541	1813
ENSMUSG00000082581	processed_pseudogene	Gm13761	ENSMUST00000117238	processed_pseudogene		2	-1	89182180	807
ENSMUSG00000029036	protein_coding	Atad3a	ENSMUST00000176043	nonsense_mediated_decay		4	-1	155761068	854
ENSMUSG00000110562	processed_pseudogene	Gm9204	ENSMUST00000212641	processed_pseudogene		8	1	128633936	947
ENSMUSG00000029036	protein_coding	Atad3a	ENSMUST00000134317	retained_intron		4	-1	155761087	697
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000068705	protein_coding	alternative1	1	-1	165634521	2171
ENSMUSG00000110654	TEC	Gm45746	ENSMUST00000212623	TEC		8	1	128654313	2447
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000130079	retained_intron		2	1	181796307	5452
ENSMUSG00000026527	protein_coding	Rgs7	ENSMUST00000194555	protein_coding		1	-1	175492500	2431
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000129843	protein_coding		2	1	181797576	4087
ENSMUSG00000048351	protein_coding	Coa7	ENSMUST00000134394	processed_transcript		4	1	108328153	565
ENSMUSG00000048351	protein_coding	Coa7	ENSMUST00000073764	processed_transcript		4	1	108328156	767
ENSMUSG00000048351	protein_coding	Coa7	ENSMUST00000141423	processed_transcript		4	1	108328178	341
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000142245	processed_transcript		2	1	181797598	750
ENSMUSG00000033793	protein_coding	Atp6v1h	ENSMUST00000192847	protein_coding		1	1	5070018	1662
ENSMUSG00000026527	protein_coding	Rgs7	ENSMUST00000195324	protein_coding	alternative1	1	-1	175492276	2209
ENSMUSG00000048351	protein_coding	Coa7	ENSMUST00000147054	processed_transcript		4	1	108328189	349
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000135744	protein_coding		2	1	181811197	380
ENSMUSG00000026527	protein_coding	Rgs7	ENSMUST00000192227	protein_coding	principal3	1	-1	175492390	2113
ENSMUSG00000010505	protein_coding	Myt1	ENSMUST00000148766	retained_intron		2	1	181819559	736
ENSMUSG00000114117	lincRNA	Gm48795	ENSMUST00000221040	lincRNA		13	-1	62815523	1161
ENSMUSG00000027522	protein_coding	Stx16	ENSMUST00000087908	protein_coding	principal2	2	1	174076922	3865
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000111435	protein_coding	principal4	1	-1	165634529	2285
ENSMUSG00000102176	TEC	Gm37871	ENSMUST00000194973	TEC		9	1	75666652	688
ENSMUSG00000032309	protein_coding	Fbxo22	ENSMUST00000034859	protein_coding	principal1	9	1	55208925	2112
ENSMUSG00000113637	processed_pseudogene	Gm7049	ENSMUST00000223520	processed_pseudogene		13	1	62813076	1712
ENSMUSG00000040147	protein_coding	Maob	ENSMUST00000040820	protein_coding	principal1	X	-1	16817366	2411
ENSMUSG00000027522	protein_coding	Stx16	ENSMUST00000156054	protein_coding		2	1	174077066	773
ENSMUSG00000026527	protein_coding	Rgs7	ENSMUST00000194288	protein_coding		1	-1	175086120	602
ENSMUSG00000033793	protein_coding	Atp6v1h	ENSMUST00000044369	protein_coding	principal3	1	1	5083080	2049
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000195410	protein_coding		1	-1	165608529	722
ENSMUSG00000026527	protein_coding	Rgs7	ENSMUST00000195477	protein_coding		1	-1	175086180	659
ENSMUSG00000026527	protein_coding	Rgs7	ENSMUST00000192203	protein_coding		1	-1	175079425	223
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000193948	protein_coding		1	-1	165605797	493
ENSMUSG00000033793	protein_coding	Atp6v1h	ENSMUST00000194676	protein_coding		1	1	5083110	970
ENSMUSG00000059816	protein_coding	Shisal2a	ENSMUST00000053157	protein_coding	principal1	4	-1	108383349	593
ENSMUSG00000032309	protein_coding	Fbxo22	ENSMUST00000153970	nonsense_mediated_decay		9	1	55208986	1979
ENSMUSG00000029089	protein_coding	5730480H06Rik	ENSMUST00000196950	protein_coding	principal1	5	1	48372329	3300
ENSMUSG00000024096	protein_coding	Ralbp1	ENSMUST00000024905	protein_coding	principal1	17	-1	65884954	3811
ENSMUSG00000026527	protein_coding	Rgs7	ENSMUST00000193798	retained_intron		1	-1	175078945	3678
ENSMUSG00000040147	protein_coding	Maob	ENSMUST00000168613	nonsense_mediated_decay		X	-1	16817275	1457
ENSMUSG00000032309	protein_coding	Fbxo22	ENSMUST00000140375	nonsense_mediated_decay		9	1	55208988	1921
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000191818	protein_coding		1	-1	165609546	853
ENSMUSG00000033793	protein_coding	Atp6v1h	ENSMUST00000194301	retained_intron		1	1	5083124	4829
ENSMUSG00000040147	protein_coding	Maob	ENSMUST00000163344	nonsense_mediated_decay		X	-1	16817275	940
ENSMUSG00000026527	protein_coding	Rgs7	ENSMUST00000027812	protein_coding	principal3	1	-1	175491130	1418
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000194437	protein_coding		1	-1	165634513	643
ENSMUSG00000083485	processed_pseudogene	Gm12308	ENSMUST00000120440	processed_pseudogene		11	-1	69631312	389
ENSMUSG00000032309	protein_coding	Fbxo22	ENSMUST00000146201	protein_coding		9	1	55209190	2009
ENSMUSG00000033793	protein_coding	Atp6v1h	ENSMUST00000194978	retained_intron		1	1	5083132	2510
ENSMUSG00000040147	protein_coding	Maob	ENSMUST00000173143	nonsense_mediated_decay		X	-1	16817320	748
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000193023	protein_coding		1	-1	165634538	889
ENSMUSG00000032309	protein_coding	Fbxo22	ENSMUST00000133795	protein_coding		9	1	55213663	476
ENSMUSG00000033793	protein_coding	Atp6v1h	ENSMUST00000192029	protein_coding		1	1	5083132	385
ENSMUSG00000083300	processed_pseudogene	Gm12309	ENSMUST00000119889	processed_pseudogene		11	-1	69631703	182
ENSMUSG00000029089	protein_coding	5730480H06Rik	ENSMUST00000030968	protein_coding	principal1	5	1	48372329	1616
ENSMUSG00000033793	protein_coding	Atp6v1h	ENSMUST00000192698	protein_coding	alternative1	1	1	5083154	1811
ENSMUSG00000027522	protein_coding	Stx16	ENSMUST00000044638	protein_coding	alternative2	2	1	174077058	3731
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000152564	protein_coding	principal1	3	1	36869998	15541
ENSMUSG00000033793	protein_coding	Atp6v1h	ENSMUST00000192142	retained_intron		1	1	5083164	2318
ENSMUSG00000029168	protein_coding	Dpysl5	ENSMUST00000114729	protein_coding	principal1	5	1	30711564	5191
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000194829	processed_transcript		1	-1	165610618	712
ENSMUSG00000024096	protein_coding	Ralbp1	ENSMUST00000166543	protein_coding	principal1	17	-1	65885798	3799
ENSMUSG00000083103	processed_pseudogene	Gm6429	ENSMUST00000117144	processed_pseudogene		X	-1	112822696	475
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000129721	retained_intron		3	1	36870011	2022
ENSMUSG00000029089	protein_coding	5730480H06Rik	ENSMUST00000200566	nonsense_mediated_decay		5	1	48372433	1422
ENSMUSG00000091665	processed_pseudogene	Gm17101	ENSMUST00000169520	processed_pseudogene		1	1	5063060	1588
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000192716	retained_intron		1	-1	165605753	658
ENSMUSG00000024096	protein_coding	Ralbp1	ENSMUST00000233054	protein_coding		17	-1	65867830	2370
ENSMUSG00000081082	processed_pseudogene	Gm14937	ENSMUST00000119709	processed_pseudogene		X	1	112958619	208
ENSMUSG00000030282	protein_coding	Cmas	ENSMUST00000032419	protein_coding	principal1	6	1	142756686	1760
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000211820	protein_coding		3	1	36870028	8594
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000192848	processed_transcript		1	-1	165613979	401
ENSMUSG00000029089	protein_coding	5730480H06Rik	ENSMUST00000195960	nonsense_mediated_decay		5	1	48374435	549
ENSMUSG00000024096	protein_coding	Ralbp1	ENSMUST00000232848	protein_coding		17	-1	65859045	793
ENSMUSG00000029168	protein_coding	Dpysl5	ENSMUST00000088081	protein_coding	principal1	5	1	30711894	5022
ENSMUSG00000082392	processed_pseudogene	Gm14938	ENSMUST00000119482	processed_pseudogene		X	1	112967089	943
ENSMUSG00000085623	antisense	Gm16041	ENSMUST00000144339	antisense		1	1	4970857	3725
ENSMUSG00000029089	protein_coding	5730480H06Rik	ENSMUST00000197915	retained_intron		5	1	48380119	648
ENSMUSG00000029591	protein_coding	Ung	ENSMUST00000031587	protein_coding	alternative2	5	1	114130386	1985
ENSMUSG00000024096	protein_coding	Ralbp1	ENSMUST00000233399	protein_coding		17	-1	65868051	443
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000193910	nonsense_mediated_decay		1	-1	165634442	761
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000129787	retained_intron		3	1	36890819	332
ENSMUSG00000030282	protein_coding	Cmas	ENSMUST00000133248	nonsense_mediated_decay		6	1	142756754	631
ENSMUSG00000029089	protein_coding	5730480H06Rik	ENSMUST00000197072	retained_intron		5	1	48392837	5405
ENSMUSG00000026566	protein_coding	Mpzl1	ENSMUST00000193172	processed_transcript		1	-1	165634086	378
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000128061	nonsense_mediated_decay		3	1	36895373	2945
ENSMUSG00000029168	protein_coding	Dpysl5	ENSMUST00000101442	protein_coding		5	1	30711901	1309
ENSMUSG00000024096	protein_coding	Ralbp1	ENSMUST00000232885	protein_coding		17	-1	65883940	380
ENSMUSG00000084963	lincRNA	Gm14936	ENSMUST00000137765	lincRNA		X	-1	113009754	2621
ENSMUSG00000028597	protein_coding	Gpx7	ENSMUST00000030332	protein_coding	principal1	4	-1	108406961	1289
ENSMUSG00000024096	protein_coding	Ralbp1	ENSMUST00000233784	protein_coding		17	-1	65884403	481
ENSMUSG00000029089	protein_coding	5730480H06Rik	ENSMUST00000176521	retained_intron		5	1	48395577	1702
ENSMUSG00000028597	protein_coding	Gpx7	ENSMUST00000184609	protein_coding		4	-1	108406724	331
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000143675	retained_intron		3	1	36908148	650
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000060043	protein_coding	principal3	6	-1	120038672	10575
ENSMUSG00000029168	protein_coding	Dpysl5	ENSMUST00000127365	processed_transcript		5	1	30778130	604
ENSMUSG00000029089	protein_coding	5730480H06Rik	ENSMUST00000199818	processed_transcript		5	1	48396664	587
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000139219	retained_intron		3	1	36946221	695
ENSMUSG00000030282	protein_coding	Cmas	ENSMUST00000144920	nonsense_mediated_decay		6	1	142756764	3236
ENSMUSG00000083560	processed_pseudogene	Gm14939	ENSMUST00000120347	processed_pseudogene		X	-1	113035654	680
ENSMUSG00000101609	antisense	Kcnq1ot1	ENSMUST00000185789	antisense		7	-1	143296549	93092
ENSMUSG00000093502	antisense	Gm20700	ENSMUST00000176749	antisense		5	1	48590889	2206
ENSMUSG00000029168	protein_coding	Dpysl5	ENSMUST00000198503	retained_intron		5	1	30788190	1243
ENSMUSG00000030282	protein_coding	Cmas	ENSMUST00000204147	nonsense_mediated_decay		6	1	142756775	625
ENSMUSG00000029591	protein_coding	Ung	ENSMUST00000102584	protein_coding	principal3	5	1	114130926	2136
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000146948	protein_coding		3	1	37007186	5610
ENSMUSG00000029168	protein_coding	Dpysl5	ENSMUST00000136657	retained_intron		5	1	30791999	676
ENSMUSG00000103791	TEC	Gm38095	ENSMUST00000192896	TEC		7	1	143344437	1402
ENSMUSG00000029591	protein_coding	Ung	ENSMUST00000143455	nonsense_mediated_decay		5	1	114131229	792
ENSMUSG00000029168	protein_coding	Dpysl5	ENSMUST00000138625	retained_intron		5	1	30793720	708
ENSMUSG00000030282	protein_coding	Cmas	ENSMUST00000146643	retained_intron		6	1	142769966	821
ENSMUSG00000102980	TEC	Gm38321	ENSMUST00000195053	TEC		7	1	143124569	235
ENSMUSG00000093490	processed_pseudogene	Gm19932	ENSMUST00000177033	processed_pseudogene		5	1	49423842	313
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000141740	protein_coding		3	1	37011577	5236
ENSMUSG00000029591	protein_coding	Ung	ENSMUST00000112275	protein_coding	alternative2	5	1	114131993	1733
ENSMUSG00000106173	sense_intronic	Gm42764	ENSMUST00000197835	sense_intronic		5	1	30759032	741
ENSMUSG00000105983	TEC	Gm42770	ENSMUST00000199657	TEC		5	-1	49128741	4155
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000184906	protein_coding		15	-1	102625073	1457
ENSMUSG00000101360	antisense	4933417O13Rik	ENSMUST00000208893	antisense		7	-1	143364625	1571
ENSMUSG00000029591	protein_coding	Ung	ENSMUST00000137402	protein_coding		5	1	114132008	609
ENSMUSG00000114889	processed_pseudogene	Gm29764	ENSMUST00000224733	processed_pseudogene		13	-1	116331528	803
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000138950	protein_coding		3	1	37011708	4998
ENSMUSG00000101360	antisense	4933417O13Rik	ENSMUST00000188294	antisense		7	-1	143330650	1523
ENSMUSG00000104562	TEC	Gm42767	ENSMUST00000198583	TEC		5	-1	49074907	632
ENSMUSG00000029591	protein_coding	Ung	ENSMUST00000200479	retained_intron		5	1	114132080	3099
ENSMUSG00000029560	protein_coding	Snx8	ENSMUST00000197880	nonsense_mediated_decay		5	-1	140360382	2590
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000138152	protein_coding		3	1	37014504	681
ENSMUSG00000114451	processed_pseudogene	Gm47912	ENSMUST00000225190	processed_pseudogene		13	-1	116361694	497
ENSMUSG00000104485	TEC	Gm38065	ENSMUST00000193147	TEC		7	-1	143353912	3492
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000184616	protein_coding	principal1	15	-1	102625450	7147
ENSMUSG00000102333	TEC	Gm37235	ENSMUST00000195171	TEC		7	1	143127792	59
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000140480	retained_intron		3	1	37018856	4172
ENSMUSG00000028127	protein_coding	Abcd3	ENSMUST00000197383	protein_coding		3	-1	121815166	3156
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000195933	retained_intron		3	1	37020179	3906
ENSMUSG00000114731	lincRNA	Gm47914	ENSMUST00000224048	lincRNA		13	-1	116677705	464
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000148698	retained_intron		3	1	37024426	4301
ENSMUSG00000015451	processed_transcript	C4a	ENSMUST00000160657	retained_intron		17	-1	34809754	526
ENSMUSG00000009545	protein_coding	Kcnq1	ENSMUST00000186488	protein_coding		7	1	143106362	182
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000136746	retained_intron		3	1	37037823	2441
ENSMUSG00000114347	lincRNA	Gm47913	ENSMUST00000224212	lincRNA		13	-1	116663536	506
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000200245	retained_intron		3	1	37038470	2413
ENSMUSG00000009545	protein_coding	Kcnq1	ENSMUST00000186288	protein_coding		7	1	143106515	196
ENSMUSG00000114347	lincRNA	Gm47913	ENSMUST00000225601	lincRNA		13	-1	116663591	365
ENSMUSG00000020669	protein_coding	Sh3yl1	ENSMUST00000142693	retained_intron		12	1	30911668	2266
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000196036	retained_intron		3	1	37042981	2750
ENSMUSG00000037270	protein_coding	4932438A13Rik	ENSMUST00000057272	protein_coding	principal1	3	1	36863106	15883
ENSMUSG00000009545	protein_coding	Kcnq1	ENSMUST00000186798	protein_coding		7	1	143106745	294
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000139261	processed_transcript		9	-1	55283595	1878
ENSMUSG00000033156	protein_coding	Cst10	ENSMUST00000047008	protein_coding	principal1	2	1	149405249	804
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000144939	processed_transcript		9	-1	55242461	721
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000088646	protein_coding	alternative2	6	-1	120037659	8364
ENSMUSG00000033156	protein_coding	Cst10	ENSMUST00000109938	protein_coding	principal1	2	1	149405057	729
ENSMUSG00000086090	antisense	Gm12531	ENSMUST00000126099	antisense		3	-1	37060035	487
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000184485	protein_coding	principal1	15	-1	102625439	2523
ENSMUSG00000033156	protein_coding	Cst10	ENSMUST00000109939	protein_coding		2	1	149405333	606
ENSMUSG00000086090	antisense	Gm12531	ENSMUST00000139667	antisense		3	-1	37060030	451
ENSMUSG00000086788	lincRNA	1700029M20Rik	ENSMUST00000153347	lincRNA		4	1	135626655	2963
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000203030	protein_coding	alternative2	6	-1	120037659	8163
ENSMUSG00000117230	processed_pseudogene	Gm29748	ENSMUST00000233401	processed_pseudogene		17	1	40552598	258
ENSMUSG00000086788	lincRNA	1700029M20Rik	ENSMUST00000134416	lincRNA		4	1	135626774	1002
ENSMUSG00000031256	protein_coding	Cstf2	ENSMUST00000033609	protein_coding	principal1	X	1	134059197	4502
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000108828	protein_coding		15	-1	102625453	2887
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000145784	nonsense_mediated_decay		9	-1	55283587	1145
ENSMUSG00000086788	lincRNA	1700029M20Rik	ENSMUST00000148529	lincRNA		4	1	135627253	420
ENSMUSG00000026520	protein_coding	Pycr2	ENSMUST00000027802	protein_coding	principal1	1	1	180904293	1580
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000160493	protein_coding		6	-1	119936449	600
ENSMUSG00000117142	unprocessed_pseudogene	Gm46573	ENSMUST00000233046	unprocessed_pseudogene		17	1	40554729	318
ENSMUSG00000086788	lincRNA	1700029M20Rik	ENSMUST00000166316	lincRNA		4	1	135626818	957
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000169033	protein_coding		15	-1	102625088	2165
ENSMUSG00000026520	protein_coding	Pycr2	ENSMUST00000194026	retained_intron		1	1	180904309	1039
ENSMUSG00000031256	protein_coding	Cstf2	ENSMUST00000113287	protein_coding		X	1	134059187	3661
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000161243	protein_coding		6	-1	119937649	843
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000183727	retained_intron		15	-1	102625438	2066
ENSMUSG00000071350	protein_coding	Setdb2	ENSMUST00000161459	protein_coding	principal2	14	-1	59440884	2995
ENSMUSG00000002459	protein_coding	Rgs20	ENSMUST00000002533	protein_coding	principal3	1	-1	5019539	1778
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000183452	nonsense_mediated_decay		15	-1	102625464	663
ENSMUSG00000026520	protein_coding	Pycr2	ENSMUST00000194253	retained_intron		1	1	180904323	2717
ENSMUSG00000071350	protein_coding	Setdb2	ENSMUST00000159640	retained_intron		14	-1	59409655	720
ENSMUSG00000031256	protein_coding	Cstf2	ENSMUST00000149658	retained_intron		X	1	134059334	7514
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000130158	protein_coding	principal1	9	-1	55326749	1000
ENSMUSG00000026520	protein_coding	Pycr2	ENSMUST00000195270	retained_intron		1	1	180905915	777
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000183765	protein_coding		15	-1	102624922	715
ENSMUSG00000071350	protein_coding	Setdb2	ENSMUST00000111253	protein_coding		14	-1	59440875	1774
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000162190	protein_coding		6	-1	119934328	201
ENSMUSG00000028127	protein_coding	Abcd3	ENSMUST00000029770	protein_coding	principal1	3	-1	121815302	3489
ENSMUSG00000002459	protein_coding	Rgs20	ENSMUST00000118000	protein_coding	alternative2	1	-1	5070285	2125
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000160872	protein_coding		6	-1	119934329	181
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000017808	protein_coding	principal1	2	-1	165287827	1843
ENSMUSG00000071350	protein_coding	Setdb2	ENSMUST00000160904	processed_transcript		14	-1	59440873	410
ENSMUSG00000031256	protein_coding	Cstf2	ENSMUST00000156778	protein_coding		X	1	134062397	775
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000184077	protein_coding		15	-1	102625067	475
ENSMUSG00000111529	unprocessed_pseudogene	Gm48141	ENSMUST00000214427	unprocessed_pseudogene		9	1	15321605	712
ENSMUSG00000075097	protein_coding	Olfr1226	ENSMUST00000216445	protein_coding	principal1	2	-1	89200024	7046
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000203335	retained_intron		6	-1	119933836	3065
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000133961	protein_coding		2	-1	165287836	862
ENSMUSG00000111132	unprocessed_pseudogene	Gm48142	ENSMUST00000214696	unprocessed_pseudogene		9	1	15320733	545
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000137675	nonsense_mediated_decay		9	-1	55283572	942
ENSMUSG00000075097	protein_coding	Olfr1226	ENSMUST00000215987	protein_coding	principal1	2	-1	89199969	3251
ENSMUSG00000002459	protein_coding	Rgs20	ENSMUST00000119256	protein_coding	alternative2	1	-1	5018735	883
ENSMUSG00000090897	protein_coding	Gm44501	ENSMUST00000232739	nonsense_mediated_decay		17	1	40561507	1229
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000185070	protein_coding		15	-1	102625446	531
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000162541	protein_coding		6	-1	119948426	1221
ENSMUSG00000031256	protein_coding	Cstf2	ENSMUST00000144483	protein_coding		X	1	134059334	552
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000126368	processed_transcript		9	-1	55283581	654
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000156134	protein_coding		2	-1	165287835	796
ENSMUSG00000028127	protein_coding	Abcd3	ENSMUST00000197662	nonsense_mediated_decay		3	-1	121815166	2467
ENSMUSG00000002459	protein_coding	Rgs20	ENSMUST00000170566	nonsense_mediated_decay		1	-1	5019379	577
ENSMUSG00000090897	protein_coding	Gm44501	ENSMUST00000167713	protein_coding	principal1	17	1	40561507	1229
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000184918	retained_intron		15	-1	102625070	583
ENSMUSG00000031256	protein_coding	Cstf2	ENSMUST00000136510	protein_coding		X	1	134066261	574
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000135531	nonsense_mediated_decay		9	-1	55283572	2095
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000161802	nonsense_mediated_decay		6	-1	119948105	845
ENSMUSG00000075097	protein_coding	Olfr1226	ENSMUST00000215562	protein_coding	principal1	2	-1	89199971	2669
ENSMUSG00000028127	protein_coding	Abcd3	ENSMUST00000196340	retained_intron		3	-1	121768852	2489
ENSMUSG00000002459	protein_coding	Rgs20	ENSMUST00000147158	protein_coding		1	-1	5070282	707
ENSMUSG00000092043	protein_coding	Esp6	ENSMUST00000232937	protein_coding	alternative2	17	1	40561507	663
ENSMUSG00000075097	protein_coding	Olfr1226	ENSMUST00000220416	protein_coding	principal1	2	-1	89199971	3387
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000147247	retained_intron		2	-1	165287838	2042
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000160820	retained_intron		6	-1	119940101	748
ENSMUSG00000031256	protein_coding	Cstf2	ENSMUST00000113286	protein_coding		X	1	134059215	2717
ENSMUSG00000028127	protein_coding	Abcd3	ENSMUST00000195965	processed_transcript		3	-1	121814909	478
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000114306	retained_intron		9	-1	55283602	1774
ENSMUSG00000002459	protein_coding	Rgs20	ENSMUST00000156289	retained_intron		1	-1	5019379	1531
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000183786	retained_intron		15	-1	102625464	620
ENSMUSG00000028127	protein_coding	Abcd3	ENSMUST00000199593	retained_intron		3	-1	121815197	638
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000204207	retained_intron		6	-1	119950154	5825
ENSMUSG00000075097	protein_coding	Olfr1226	ENSMUST00000217601	protein_coding	principal1	2	-1	89200048	2670
ENSMUSG00000002459	protein_coding	Rgs20	ENSMUST00000133521	processed_transcript		1	-1	5070273	670
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000156112	processed_transcript		9	-1	55326844	519
ENSMUSG00000031256	protein_coding	Cstf2	ENSMUST00000148080	processed_transcript		X	1	134059311	743
ENSMUSG00000099083	protein_coding	Atf7	ENSMUST00000096143	protein_coding		15	-1	102529025	390
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000161185	retained_intron		6	-1	119951998	731
ENSMUSG00000071350	protein_coding	Setdb2	ENSMUST00000095775	protein_coding	alternative2	14	-1	59440877	3034
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000109300	protein_coding	principal1	2	-1	165287869	2008
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000128020	processed_transcript		9	-1	55283587	347
ENSMUSG00000092043	protein_coding	Esp6	ENSMUST00000097324	protein_coding	principal2	17	1	40561507	658
ENSMUSG00000106087	TEC	Gm43609	ENSMUST00000199084	TEC		3	-1	121764904	2712
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000162368	protein_coding		6	-1	119968663	640
ENSMUSG00000029088	protein_coding	Kcnip4	ENSMUST00000166924	protein_coding	alternative1	5	-1	48599682	2257
ENSMUSG00000075097	protein_coding	Olfr1226	ENSMUST00000214709	protein_coding	principal1	2	-1	89199968	5270
ENSMUSG00000089643	processed_pseudogene	Gm16301	ENSMUST00000161959	processed_pseudogene		14	-1	59414564	295
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000134183	processed_transcript		9	-1	55283598	381
ENSMUSG00000117190	protein_coding	Esp5	ENSMUST00000233672	protein_coding	principal1	17	1	40576593	453
ENSMUSG00000075097	protein_coding	Olfr1226	ENSMUST00000099790	protein_coding	principal1	2	-1	89194032	933
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000159785	protein_coding		6	-1	119956170	755
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000133659	processed_transcript		9	-1	55325187	674
ENSMUSG00000052414	protein_coding	Gm28047	ENSMUST00000184772	nonsense_mediated_decay	principal1	15	-1	102625067	1611
ENSMUSG00000087323	antisense	Gm14170	ENSMUST00000133751	antisense		2	-1	156378968	331
ENSMUSG00000032311	protein_coding	Nrg4	ENSMUST00000164721	protein_coding	principal1	9	-1	55283625	1927
ENSMUSG00000032181	protein_coding	Scg3	ENSMUST00000034699	protein_coding	principal1	9	-1	75684056	2384
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000161048	protein_coding		6	-1	119990167	1215
ENSMUSG00000063328	processed_pseudogene	Gm9396	ENSMUST00000076703	processed_pseudogene		3	1	130068412	567
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000109299	protein_coding	principal1	2	-1	165287755	1926
ENSMUSG00000089883	processed_pseudogene	Gm3355	ENSMUST00000160079	processed_pseudogene		17	-1	13862803	487
ENSMUSG00000030750	protein_coding	Nsmce1	ENSMUST00000033006	protein_coding	principal1	7	-1	125491596	1120
ENSMUSG00000095540	protein_coding	Esp4	ENSMUST00000178498	protein_coding	principal1	17	1	40598594	553
ENSMUSG00000106072	processed_pseudogene	Gm42663	ENSMUST00000199883	processed_pseudogene		3	1	130080779	351
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000109298	protein_coding	principal1	2	-1	165287755	1991
ENSMUSG00000032181	protein_coding	Scg3	ENSMUST00000213324	protein_coding		9	-1	75684015	2152
ENSMUSG00000030750	protein_coding	Nsmce1	ENSMUST00000138616	protein_coding		7	-1	125491399	598
ENSMUSG00000023052	protein_coding	Npff	ENSMUST00000023814	protein_coding	principal1	15	-1	102524621	446
ENSMUSG00000087205	antisense	4930445N08Rik	ENSMUST00000156925	antisense		2	1	74579076	313
ENSMUSG00000117042	lincRNA	2700054A10Rik	ENSMUST00000138345	lincRNA		17	-1	13500336	796
ENSMUSG00000029088	protein_coding	Kcnip4	ENSMUST00000172363	processed_transcript		5	-1	48754570	2108
ENSMUSG00000052549	protein_coding	Arl13a	ENSMUST00000064476	protein_coding	principal1	X	1	134187501	1740
ENSMUSG00000030750	protein_coding	Nsmce1	ENSMUST00000149289	processed_transcript		7	-1	125478559	398
ENSMUSG00000032181	protein_coding	Scg3	ENSMUST00000215603	nonsense_mediated_decay		9	-1	75683690	813
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000125550	retained_intron		2	-1	165277841	1110
ENSMUSG00000029088	protein_coding	Kcnip4	ENSMUST00000176978	protein_coding	principal3	5	-1	48889557	2189
ENSMUSG00000081494	processed_pseudogene	Gm14130	ENSMUST00000118417	processed_pseudogene		2	1	149743175	987
ENSMUSG00000117042	lincRNA	2700054A10Rik	ENSMUST00000137459	lincRNA		17	-1	13568864	4453
ENSMUSG00000017664	protein_coding	Slc35c2	ENSMUST00000131409	protein_coding		2	-1	165287827	690
ENSMUSG00000087029	lincRNA	Gm14133	ENSMUST00000148202	lincRNA		2	-1	149798701	223
ENSMUSG00000023052	protein_coding	Npff	ENSMUST00000184659	retained_intron		15	-1	102524942	995
ENSMUSG00000117042	lincRNA	2700054A10Rik	ENSMUST00000185626	lincRNA		17	-1	13668891	2213
ENSMUSG00000039828	protein_coding	Wdr70	ENSMUST00000226928	retained_intron		15	-1	7886377	1177
ENSMUSG00000087029	lincRNA	Gm14133	ENSMUST00000139471	lincRNA		2	-1	149798743	1274
ENSMUSG00000029088	protein_coding	Kcnip4	ENSMUST00000087395	protein_coding	alternative1	5	-1	49524907	2366
ENSMUSG00000032181	protein_coding	Scg3	ENSMUST00000213637	processed_transcript		9	-1	75683587	574
ENSMUSG00000079711	transcribed_unprocessed_pseudogene	Smok4a	ENSMUST00000144015	processed_transcript		17	1	13521456	2317
ENSMUSG00000031258	protein_coding	Xkrx	ENSMUST00000033611	protein_coding	principal1	X	-1	134161928	2876
ENSMUSG00000032181	protein_coding	Scg3	ENSMUST00000214244	protein_coding		9	-1	75684010	537
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000160769	retained_intron		6	-1	119990126	3623
ENSMUSG00000079711	transcribed_unprocessed_pseudogene	Smok4a	ENSMUST00000074512	transcribed_unprocessed_pseudogene		17	1	13526191	1455
ENSMUSG00000036305	processed_pseudogene	Rpl39-ps	ENSMUST00000146505	processed_pseudogene		15	1	102635038	151
ENSMUSG00000029088	protein_coding	Kcnip4	ENSMUST00000101215	processed_transcript		5	-1	48492264	2139
ENSMUSG00000032181	protein_coding	Scg3	ENSMUST00000214176	processed_transcript		9	-1	75684036	563
ENSMUSG00000093957	protein_coding	Esp3	ENSMUST00000177574	protein_coding	principal1	17	1	40632075	1316
ENSMUSG00000031258	protein_coding	Xkrx	ENSMUST00000148722	processed_transcript		X	-1	134162076	402
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000159397	retained_intron		6	-1	120038607	5745
ENSMUSG00000032892	protein_coding	Rangrf	ENSMUST00000138362	processed_transcript		11	-1	68973012	387
ENSMUSG00000029088	protein_coding	Kcnip4	ENSMUST00000176191	protein_coding		5	-1	49524764	2116
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000111564	protein_coding		5	-1	123684322	5609
ENSMUSG00000041168	protein_coding	Lonp1	ENSMUST00000233732	nonsense_mediated_decay		17	-1	56626875	4362
ENSMUSG00000032181	protein_coding	Scg3	ENSMUST00000215722	processed_transcript		9	-1	75683975	452
ENSMUSG00000090211	lincRNA	Gm16050	ENSMUST00000160626	lincRNA		17	1	13500954	2463
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000160686	protein_coding		6	-1	119962930	716
ENSMUSG00000116056	lincRNA	Gm4544	ENSMUST00000229682	lincRNA		15	1	102657111	1157
ENSMUSG00000029088	protein_coding	Kcnip4	ENSMUST00000175660	protein_coding	alternative1	5	-1	49285659	2394
ENSMUSG00000117279	unprocessed_pseudogene	Gm49850	ENSMUST00000232992	unprocessed_pseudogene		17	1	40698070	389
ENSMUSG00000085705	lincRNA	Gm16046	ENSMUST00000145030	lincRNA		17	-1	13683497	445
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000161512	protein_coding		6	-1	119963733	1426
ENSMUSG00000098232	processed_pseudogene	Gm3671	ENSMUST00000182463	processed_pseudogene		9	-1	75694659	1007
ENSMUSG00000028255	protein_coding	Clca1	ENSMUST00000029919	protein_coding	principal1	3	-1	145032776	3655
ENSMUSG00000116056	lincRNA	Gm4544	ENSMUST00000231102	lincRNA		15	1	102657568	870
ENSMUSG00000032892	protein_coding	Rangrf	ENSMUST00000132093	processed_transcript		11	-1	68973789	967
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000161392	processed_transcript		6	-1	119992529	516
ENSMUSG00000085705	lincRNA	Gm16046	ENSMUST00000150889	lincRNA		17	-1	13683487	1001
ENSMUSG00000029088	protein_coding	Kcnip4	ENSMUST00000101214	processed_transcript		5	-1	48754564	766
ENSMUSG00000116056	lincRNA	Gm4544	ENSMUST00000229601	lincRNA		15	1	102658698	623
ENSMUSG00000085705	lincRNA	Gm16046	ENSMUST00000128138	lincRNA		17	-1	13683516	365
ENSMUSG00000028255	protein_coding	Clca1	ENSMUST00000195901	processed_transcript		3	-1	145009173	261
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000035513	processed_transcript		6	-1	119981448	646
ENSMUSG00000104655	TEC	Gm43317	ENSMUST00000197924	TEC		5	-1	49007955	2544
ENSMUSG00000028255	protein_coding	Clca1	ENSMUST00000198832	processed_transcript		3	-1	145018915	629
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000159151	retained_intron		6	-1	119973064	628
ENSMUSG00000017817	protein_coding	Jph2	ENSMUST00000017961	protein_coding	principal1	2	-1	163397949	4211
ENSMUSG00000105454	TEC	Gm43830	ENSMUST00000198760	TEC		5	-1	48791966	1067
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000111566	protein_coding	principal3	5	-1	123684618	6133
ENSMUSG00000032892	protein_coding	Rangrf	ENSMUST00000038644	protein_coding	principal1	11	-1	68973843	820
ENSMUSG00000020669	protein_coding	Sh3yl1	ENSMUST00000020997	protein_coding	principal1	12	1	30911668	1750
ENSMUSG00000105574	TEC	Gm43648	ENSMUST00000197775	TEC		5	-1	48627153	2485
ENSMUSG00000017817	protein_coding	Jph2	ENSMUST00000109425	protein_coding	principal1	2	-1	163397993	4155
ENSMUSG00000020669	protein_coding	Sh3yl1	ENSMUST00000110880	protein_coding		12	1	30911692	1601
ENSMUSG00000105791	TEC	Gm43341	ENSMUST00000200104	TEC		5	-1	48979585	1308
ENSMUSG00000039828	protein_coding	Wdr70	ENSMUST00000045766	protein_coding	principal1	15	-1	8099191	2126
ENSMUSG00000103544	TEC	Gm10048	ENSMUST00000200465	TEC		5	-1	48928740	3787
ENSMUSG00000020669	protein_coding	Sh3yl1	ENSMUST00000128814	processed_transcript		12	1	30912187	1370
ENSMUSG00000103544	TEC	Gm10048	ENSMUST00000194196	pseudogene		5	-1	48928234	372
ENSMUSG00000062683	protein_coding	Atp5g2	ENSMUST00000185641	protein_coding	principal1	15	-1	102671127	731
ENSMUSG00000038347	protein_coding	Tcte2	ENSMUST00000143162	protein_coding	alternative2	17	-1	13761378	1221
ENSMUSG00000039828	protein_coding	Wdr70	ENSMUST00000227371	protein_coding		15	-1	8099209	1130
ENSMUSG00000105828	TEC	Gm43048	ENSMUST00000196101	TEC		5	-1	49217688	388
ENSMUSG00000062683	protein_coding	Atp5g2	ENSMUST00000187160	protein_coding		15	-1	102667743	635
ENSMUSG00000038347	protein_coding	Tcte2	ENSMUST00000053376	protein_coding	alternative2	17	-1	13761402	1105
ENSMUSG00000116090	processed_pseudogene	Rpl19-ps6	ENSMUST00000229131	processed_pseudogene		15	1	7975075	586
ENSMUSG00000032892	protein_coding	Rangrf	ENSMUST00000150017	processed_transcript		11	-1	68975185	736
ENSMUSG00000106539	TEC	Gm43670	ENSMUST00000199047	TEC		5	1	49425017	1767
ENSMUSG00000062683	protein_coding	Atp5g2	ENSMUST00000186952	protein_coding		15	-1	102672352	753
ENSMUSG00000115002	antisense	Gm10847	ENSMUST00000227773	antisense		14	1	74926445	1331
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000137363	protein_coding		5	-1	123647877	4670
ENSMUSG00000081806	processed_pseudogene	Gm14901	ENSMUST00000119001	processed_pseudogene		X	1	101059010	283
ENSMUSG00000041168	protein_coding	Lonp1	ENSMUST00000047226	protein_coding	principal1	17	-1	56626887	2951
ENSMUSG00000032892	protein_coding	Rangrf	ENSMUST00000143444	processed_transcript		11	-1	68973343	568
ENSMUSG00000106244	TEC	Gm43046	ENSMUST00000198771	TEC		5	-1	49071460	2451
ENSMUSG00000107296	antisense	Gm43500	ENSMUST00000201067	antisense		5	-1	135123293	312
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000111561	protein_coding	alternative2	5	-1	123684275	5883
ENSMUSG00000062683	protein_coding	Atp5g2	ENSMUST00000075630	protein_coding	principal1	15	-1	102667749	441
ENSMUSG00000038347	protein_coding	Tcte2	ENSMUST00000128194	nonsense_mediated_decay		17	-1	13761367	541
ENSMUSG00000039349	protein_coding	C130074G19Rik	ENSMUST00000048308	protein_coding	principal1	1	-1	184883218	3035
ENSMUSG00000114290	lincRNA	4930435F18Rik	ENSMUST00000224552	lincRNA		13	-1	116838178	1786
ENSMUSG00000032892	protein_coding	Rangrf	ENSMUST00000144271	processed_transcript		11	-1	68973445	537
ENSMUSG00000093748	processed_pseudogene	Gm19031	ENSMUST00000176280	processed_pseudogene		5	1	48665905	1365
ENSMUSG00000038347	protein_coding	Tcte2	ENSMUST00000142863	processed_transcript		17	-1	13732898	444
ENSMUSG00000032892	protein_coding	Rangrf	ENSMUST00000156178	processed_transcript		11	-1	68973368	428
ENSMUSG00000025531	protein_coding	Chm	ENSMUST00000026607	protein_coding	principal1	X	-1	113185517	4868
ENSMUSG00000032892	protein_coding	Rangrf	ENSMUST00000133099	processed_transcript		11	-1	68973196	389
ENSMUSG00000038347	protein_coding	Tcte2	ENSMUST00000130033	protein_coding	alternative2	17	-1	13761386	1462
ENSMUSG00000105889	processed_pseudogene	Gm42776	ENSMUST00000198031	processed_pseudogene		3	-1	121823849	406
ENSMUSG00000105771	TEC	2900064K03Rik	ENSMUST00000196567	TEC		5	-1	49518937	3113
ENSMUSG00000025531	protein_coding	Chm	ENSMUST00000113388	protein_coding		X	-1	113185517	4749
ENSMUSG00000038347	protein_coding	Tcte2	ENSMUST00000127032	protein_coding	alternative2	17	-1	13761601	1875
ENSMUSG00000083977	unprocessed_pseudogene	Mageb8-ps	ENSMUST00000117228	unprocessed_pseudogene		X	-1	86328935	1033
ENSMUSG00000074736	protein_coding	Syndig1	ENSMUST00000109935	protein_coding	principal1	2	1	149830788	2050
ENSMUSG00000104929	TEC	Gm42766	ENSMUST00000200233	TEC		5	-1	49022338	1332
ENSMUSG00000104595	processed_pseudogene	Gm42593	ENSMUST00000198469	processed_pseudogene		3	1	121862842	377
ENSMUSG00000022054	protein_coding	Nefm	ENSMUST00000111089	protein_coding	alternative2	14	-1	68124846	3680
ENSMUSG00000025531	protein_coding	Chm	ENSMUST00000153417	processed_transcript		X	-1	113047579	706
ENSMUSG00000105620	TEC	Gm43047	ENSMUST00000200089	TEC		5	1	49070003	3460
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000177761	protein_coding	alternative2	6	-1	120038655	11303
ENSMUSG00000074736	protein_coding	Syndig1	ENSMUST00000144179	protein_coding		2	1	149829211	413
ENSMUSG00000045962	protein_coding	Wnk1	ENSMUST00000088644	protein_coding	alternative2	6	-1	120038655	11330
ENSMUSG00000038347	protein_coding	Tcte2	ENSMUST00000148430	protein_coding	principal2	17	-1	13761825	1839
ENSMUSG00000104279	TEC	Gm38300	ENSMUST00000194245	TEC		1	1	178339601	1870
ENSMUSG00000104661	TEC	Gm42768	ENSMUST00000197734	TEC		5	-1	49086770	2897
ENSMUSG00000074736	protein_coding	Syndig1	ENSMUST00000109934	protein_coding	principal1	2	1	149830843	2081
ENSMUSG00000022054	protein_coding	Nefm	ENSMUST00000022638	protein_coding	principal2	14	-1	68124846	3334
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000125340	retained_intron		5	-1	123603810	2394
ENSMUSG00000038347	protein_coding	Tcte2	ENSMUST00000232858	protein_coding		17	-1	13760084	344
ENSMUSG00000018740	protein_coding	Slc25a35	ENSMUST00000102606	protein_coding	principal2	11	1	68968131	1828
ENSMUSG00000106404	TEC	Gm42919	ENSMUST00000197753	TEC		5	-1	48804011	1284
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000198833	processed_transcript		5	-1	123578557	596
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000063905	protein_coding	alternative2	5	-1	123684325	4589
ENSMUSG00000074736	protein_coding	Syndig1	ENSMUST00000137280	protein_coding		2	1	149830901	570
ENSMUSG00000025531	protein_coding	Chm	ENSMUST00000135821	processed_transcript		X	-1	113185509	3386
ENSMUSG00000084017	processed_pseudogene	Rpl21-ps9	ENSMUST00000119897	processed_pseudogene		2	1	156386741	482
ENSMUSG00000105700	TEC	Gm42772	ENSMUST00000199945	TEC		5	-1	49411832	3041
ENSMUSG00000005373	protein_coding	Mlxipl	ENSMUST00000202431	processed_transcript		5	1	135089890	412
ENSMUSG00000038347	protein_coding	Tcte2	ENSMUST00000129681	processed_transcript		17	-1	13759985	669
ENSMUSG00000025531	protein_coding	Chm	ENSMUST00000133469	processed_transcript		X	-1	113185509	347
ENSMUSG00000074736	protein_coding	Syndig1	ENSMUST00000149705	protein_coding		2	1	149830922	620
ENSMUSG00000005373	protein_coding	Mlxipl	ENSMUST00000141770	retained_intron		5	1	135106891	1822
ENSMUSG00000038347	protein_coding	Tcte2	ENSMUST00000155166	processed_transcript		17	-1	13760368	616
ENSMUSG00000018740	protein_coding	Slc25a35	ENSMUST00000136520	processed_transcript		11	1	68968147	652
ENSMUSG00000105530	TEC	Gm43829	ENSMUST00000196191	TEC		5	-1	48715891	3802
ENSMUSG00000074736	protein_coding	Syndig1	ENSMUST00000140870	protein_coding		2	1	149830869	454
ENSMUSG00000018740	protein_coding	Slc25a35	ENSMUST00000018884	protein_coding	alternative1	11	1	68968148	3648
ENSMUSG00000103354	TEC	Gm38083	ENSMUST00000194758	TEC		9	1	76067449	3498
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000137602	retained_intron		5	-1	123612172	1505
ENSMUSG00000102869	lincRNA	2900097C17Rik	ENSMUST00000192863	lincRNA		2	-1	156392979	4915
ENSMUSG00000105332	TEC	Gm43316	ENSMUST00000197252	TEC		5	-1	49018807	1295
ENSMUSG00000102869	lincRNA	2900097C17Rik	ENSMUST00000192590	lincRNA		2	-1	156392829	339
ENSMUSG00000117063	lincRNA	Gm49936	ENSMUST00000135850	lincRNA		17	-1	13761378	2047
ENSMUSG00000074737	antisense	C530025M09Rik	ENSMUST00000238777	antisense		2	-1	149831642	3304
ENSMUSG00000111119	processed_pseudogene	Gm34005	ENSMUST00000215834	processed_pseudogene		9	1	75964204	282
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000031382	protein_coding	alternative2	5	-1	123656018	4387
ENSMUSG00000074737	antisense	C530025M09Rik	ENSMUST00000099264	antisense		2	-1	149831213	690
ENSMUSG00000105922	TEC	Gm42769	ENSMUST00000198576	TEC		5	-1	49117417	1659
ENSMUSG00000048473	protein_coding	Sult6b2	ENSMUST00000156662	nonsense_mediated_decay		6	-1	142804502	2160
ENSMUSG00000022055	protein_coding	Nefl	ENSMUST00000022639	protein_coding	principal1	14	1	68083863	3380
ENSMUSG00000105653	TEC	Gm43831	ENSMUST00000200461	TEC		5	-1	48537941	2598
ENSMUSG00000015451	processed_transcript	C4a	ENSMUST00000160679	processed_transcript		17	-1	34823464	5371
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000154672	protein_coding		5	-1	123617822	3544
ENSMUSG00000073396	protein_coding	Esp1	ENSMUST00000233513	protein_coding	alternative2	17	1	40727120	1049
ENSMUSG00000106408	TEC	Gm43321	ENSMUST00000198897	TEC		5	-1	48821884	2409
ENSMUSG00000018001	protein_coding	Cyth3	ENSMUST00000116456	protein_coding	principal3	5	1	143622447	3738
ENSMUSG00000114466	processed_pseudogene	Gm19216	ENSMUST00000224875	processed_pseudogene		14	1	68113933	677
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000133545	retained_intron		5	-1	123617463	694
ENSMUSG00000015451	processed_transcript	C4a	ENSMUST00000159669	processed_transcript		17	-1	34823464	5165
ENSMUSG00000073396	protein_coding	Esp1	ENSMUST00000161110	protein_coding	principal2	17	1	40727120	1049
ENSMUSG00000018001	protein_coding	Cyth3	ENSMUST00000198355	retained_intron		5	1	143622501	4928
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000154432	retained_intron		5	-1	123603719	898
ENSMUSG00000106469	TEC	C030015E24Rik	ENSMUST00000198148	TEC		5	-1	48998539	828
ENSMUSG00000015451	processed_transcript	C4a	ENSMUST00000161797	retained_intron		17	-1	34811387	932
ENSMUSG00000106579	TEC	Gm42771	ENSMUST00000198342	TEC		5	-1	49222161	2486
ENSMUSG00000015451	processed_transcript	C4a	ENSMUST00000162133	processed_transcript		17	-1	34811393	354
ENSMUSG00000105958	TEC	Gm43319	ENSMUST00000198036	TEC		5	-1	48801279	2270
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000144121	nonsense_mediated_decay		5	-1	123655908	2880
ENSMUSG00000015451	processed_transcript	C4a	ENSMUST00000161121	processed_transcript		17	-1	34812154	601
ENSMUSG00000048473	protein_coding	Sult6b2	ENSMUST00000111768	protein_coding	principal1	6	-1	142804466	1475
ENSMUSG00000032179	protein_coding	Bmp5	ENSMUST00000012281	protein_coding	principal1	9	1	75775364	3822
ENSMUSG00000009545	protein_coding	Kcnq1	ENSMUST00000009689	protein_coding	principal1	7	1	143107254	3029
ENSMUSG00000048299	protein_coding	Olfr148	ENSMUST00000216801	protein_coding	principal1	9	1	39610655	2775
ENSMUSG00000029560	protein_coding	Snx8	ENSMUST00000196130	protein_coding	principal1	5	-1	140360415	2547
ENSMUSG00000015451	processed_transcript	C4a	ENSMUST00000160528	processed_transcript		17	-1	34823464	4477
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000149410	protein_coding		5	-1	123666690	2669
ENSMUSG00000048299	protein_coding	Olfr148	ENSMUST00000050807	protein_coding	principal1	9	1	39613544	1017
ENSMUSG00000009545	protein_coding	Kcnq1	ENSMUST00000185383	protein_coding		7	1	143107551	1535
ENSMUSG00000032179	protein_coding	Bmp5	ENSMUST00000137213	processed_transcript		9	1	75828022	541
ENSMUSG00000015451	processed_transcript	C4a	ENSMUST00000159539	retained_intron		17	-1	34812256	759
ENSMUSG00000049550	protein_coding	Clip1	ENSMUST00000199018	retained_intron		5	-1	123636274	2692
ENSMUSG00000015451	processed_transcript	C4a	ENSMUST00000160309	retained_intron		17	-1	34815073	822
ENSMUSG00000110817	TEC	Gm47723	ENSMUST00000215680	TEC		9	1	75876260	1454
ENSMUSG00000009545	protein_coding	Kcnq1	ENSMUST00000186284	protein_coding		7	1	143108351	490
ENSMUSG00000104877	TEC	Gm42651	ENSMUST00000199851	TEC		5	-1	123683468	1339
ENSMUSG00000059867	protein_coding	Olfr960	ENSMUST00000215616	processed_transcript		9	1	39621373	1282
ENSMUSG00000009545	protein_coding	Kcnq1	ENSMUST00000187213	protein_coding		7	1	143109194	282
ENSMUSG00000015451	processed_transcript	C4a	ENSMUST00000015595	processed_transcript		17	-1	34823454	5357
ENSMUSG00000107561	antisense	Gm44264	ENSMUST00000203049	antisense		6	1	88445687	742
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000160946	protein_coding		9	-1	15333392	4144
ENSMUSG00000102795	processed_pseudogene	Gm6236	ENSMUST00000193785	processed_pseudogene		3	1	9899430	1009
ENSMUSG00000091908	antisense	Gm17231	ENSMUST00000170133	antisense		9	1	57777865	637
ENSMUSG00000101062	antisense	Gm28821	ENSMUST00000185637	antisense		7	-1	143140608	610
ENSMUSG00000091908	antisense	Gm17231	ENSMUST00000165858	antisense		9	1	57825945	663
ENSMUSG00000091908	antisense	Gm17231	ENSMUST00000163186	antisense		9	1	57827347	645
ENSMUSG00000018001	protein_coding	Cyth3	ENSMUST00000177196	protein_coding		5	1	143622534	360
ENSMUSG00000104012	TEC	Gm37364	ENSMUST00000192533	TEC		7	1	143297698	3920
ENSMUSG00000029560	protein_coding	Snx8	ENSMUST00000031539	protein_coding		5	-1	140389262	2627
ENSMUSG00000059867	protein_coding	Olfr960	ENSMUST00000216584	protein_coding	alternative2	9	1	39622928	1148
ENSMUSG00000059867	protein_coding	Olfr960	ENSMUST00000077060	protein_coding	principal2	9	1	39623105	1067
ENSMUSG00000029560	protein_coding	Snx8	ENSMUST00000196566	protein_coding	principal1	5	-1	140382733	1914
ENSMUSG00000104517	processed_pseudogene	Gm18407	ENSMUST00000192126	processed_pseudogene		1	-1	165644688	790
ENSMUSG00000029560	protein_coding	Snx8	ENSMUST00000195982	retained_intron		5	-1	140353514	522
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000058041	retained_intron		9	-1	15333499	3984
ENSMUSG00000029560	protein_coding	Snx8	ENSMUST00000198945	protein_coding		5	-1	140367110	687
ENSMUSG00000049985	protein_coding	Ankrd55	ENSMUST00000168684	protein_coding		13	1	112288518	1005
ENSMUSG00000029560	protein_coding	Snx8	ENSMUST00000196020	protein_coding		5	-1	140389241	493
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000059410	retained_intron		9	-1	15341094	3538
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000059775	protein_coding	principal1	17	-1	70851207	1631
ENSMUSG00000103318	processed_pseudogene	Gm38356	ENSMUST00000194313	processed_pseudogene		3	-1	66907766	408
ENSMUSG00000002324	protein_coding	Rec8	ENSMUST00000002395	protein_coding	principal1	14	1	55618037	2184
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000186358	protein_coding		17	-1	70851069	1455
ENSMUSG00000018001	protein_coding	Cyth3	ENSMUST00000131436	protein_coding		5	1	143634066	428
ENSMUSG00000105794	processed_pseudogene	Gm43516	ENSMUST00000196891	processed_pseudogene		3	1	66953541	322
ENSMUSG00000018001	protein_coding	Cyth3	ENSMUST00000177281	protein_coding		5	1	143636351	424
ENSMUSG00000002324	protein_coding	Rec8	ENSMUST00000227922	retained_intron		14	1	55623498	726
ENSMUSG00000004661	protein_coding	Arid3b	ENSMUST00000164010	protein_coding		9	-1	57836706	1259
ENSMUSG00000025809	protein_coding	Itgb1	ENSMUST00000090006	protein_coding	principal1	8	1	128685654	3815
ENSMUSG00000002324	protein_coding	Rec8	ENSMUST00000141425	retained_intron		14	1	55623569	836
ENSMUSG00000002324	protein_coding	Rec8	ENSMUST00000155193	retained_intron		14	1	55624919	381
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000139347	protein_coding		17	1	13760539	822
ENSMUSG00000018001	protein_coding	Cyth3	ENSMUST00000110727	protein_coding	alternative2	5	1	143651241	2068
ENSMUSG00000025809	protein_coding	Itgb1	ENSMUST00000124826	nonsense_mediated_decay		8	1	128685757	2906
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000166395	protein_coding		17	-1	70851734	1714
ENSMUSG00000025809	protein_coding	Itgb1	ENSMUST00000135281	retained_intron		8	1	128685870	651
ENSMUSG00000025809	protein_coding	Itgb1	ENSMUST00000149116	protein_coding		8	1	128724333	711
ENSMUSG00000032098	protein_coding	Treh	ENSMUST00000034609	protein_coding	principal1	9	1	44673233	2048
ENSMUSG00000026495	protein_coding	Efcab2	ENSMUST00000194861	processed_transcript		1	1	178406085	406
ENSMUSG00000111787	unprocessed_pseudogene	Gm5035	ENSMUST00000215581	unprocessed_pseudogene		2	-1	89211719	927
ENSMUSG00000079644	protein_coding	Gm1110	ENSMUST00000217197	processed_transcript		9	-1	26923081	2394
ENSMUSG00000079644	protein_coding	Gm1110	ENSMUST00000214847	retained_intron		9	-1	26898342	1626
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000172164	protein_coding	principal1	16	-1	17576721	3281
ENSMUSG00000026495	protein_coding	Efcab2	ENSMUST00000027775	protein_coding	principal1	1	1	178406103	3580
ENSMUSG00000032098	protein_coding	Treh	ENSMUST00000139389	nonsense_mediated_decay		9	1	44673235	1944
ENSMUSG00000000365	protein_coding	Rnf17	ENSMUST00000095793	protein_coding	principal1	14	1	56402581	5264
ENSMUSG00000007908	protein_coding	Hmgcll1	ENSMUST00000008052	protein_coding	principal1	9	1	76014855	3737
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000063544	protein_coding	principal1	16	-1	17576998	2758
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000156591	protein_coding		17	1	13760541	798
ENSMUSG00000007908	protein_coding	Hmgcll1	ENSMUST00000183425	protein_coding		9	1	76014855	3239
ENSMUSG00000032098	protein_coding	Treh	ENSMUST00000071219	protein_coding		9	1	44673249	1927
ENSMUSG00000026495	protein_coding	Efcab2	ENSMUST00000192905	processed_transcript		1	1	178448784	667
ENSMUSG00000000365	protein_coding	Rnf17	ENSMUST00000223627	protein_coding		14	1	56402697	2077
ENSMUSG00000079644	protein_coding	Gm1110	ENSMUST00000115261	protein_coding	principal1	9	-1	26923081	1996
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000118283	protein_coding		17	-1	70853546	1388
ENSMUSG00000007908	protein_coding	Hmgcll1	ENSMUST00000183979	protein_coding		9	1	76014984	1136
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000232385	protein_coding		16	-1	17576698	1714
ENSMUSG00000004661	protein_coding	Arid3b	ENSMUST00000171444	protein_coding	principal2	9	-1	57836708	4171
ENSMUSG00000072683	processed_transcript	Gm7457	ENSMUST00000100821	antisense		6	1	142814231	2459
ENSMUSG00000079644	protein_coding	Gm1110	ENSMUST00000214461	retained_intron		9	-1	26923111	1136
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000231615	protein_coding		16	-1	17576698	1711
ENSMUSG00000072683	processed_transcript	Gm7457	ENSMUST00000159599	retained_intron		6	1	142814385	1847
ENSMUSG00000032098	protein_coding	Treh	ENSMUST00000150822	nonsense_mediated_decay		9	1	44683296	745
ENSMUSG00000026353	protein_coding	Ubxn4	ENSMUST00000190736	protein_coding		1	1	128243964	607
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000127719	protein_coding		17	-1	70849790	923
ENSMUSG00000004661	protein_coding	Arid3b	ENSMUST00000169563	processed_transcript		9	-1	57791648	327
ENSMUSG00000061272	processed_pseudogene	Gm14173	ENSMUST00000117690	processed_pseudogene		2	-1	156411174	278
ENSMUSG00000004661	protein_coding	Arid3b	ENSMUST00000171949	protein_coding		9	-1	57796221	640
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000232429	retained_intron		16	-1	17576671	2577
ENSMUSG00000000365	protein_coding	Rnf17	ENSMUST00000225361	retained_intron		14	1	56402700	1609
ENSMUSG00000007908	protein_coding	Hmgcll1	ENSMUST00000121592	retained_intron		9	1	76015014	1909
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000156484	protein_coding		17	-1	70846326	613
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000111993	protein_coding	alternative2	2	-1	74578948	3321
ENSMUSG00000007908	protein_coding	Hmgcll1	ENSMUST00000183505	retained_intron		9	1	76015015	363
ENSMUSG00000004661	protein_coding	Arid3b	ENSMUST00000114165	nonsense_mediated_decay		9	-1	57836478	1944
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000232226	protein_coding		16	-1	17576655	1920
ENSMUSG00000049985	protein_coding	Ankrd55	ENSMUST00000165593	protein_coding	alternative2	13	1	112288589	2749
ENSMUSG00000000365	protein_coding	Rnf17	ENSMUST00000225621	processed_transcript		14	1	56450573	2180
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000135007	protein_coding		17	-1	70847170	1291
ENSMUSG00000007908	protein_coding	Hmgcll1	ENSMUST00000126321	retained_intron		9	1	76015019	660
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000231645	protein_coding		16	-1	17576631	763
ENSMUSG00000007908	protein_coding	Hmgcll1	ENSMUST00000117981	protein_coding		9	1	76015055	1189
ENSMUSG00000004661	protein_coding	Arid3b	ENSMUST00000164035	nonsense_mediated_decay		9	-1	57836761	3119
ENSMUSG00000000365	protein_coding	Rnf17	ENSMUST00000223646	processed_transcript		14	1	56482176	621
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000064503	protein_coding	principal3	2	-1	74578948	3195
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000134654	protein_coding		17	-1	70849644	679
ENSMUSG00000049985	protein_coding	Ankrd55	ENSMUST00000022275	protein_coding	principal3	13	1	112288820	2412
ENSMUSG00000000365	protein_coding	Rnf17	ENSMUST00000225737	nonsense_mediated_decay		14	1	56509283	680
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000231552	protein_coding		16	-1	17576220	596
ENSMUSG00000004661	protein_coding	Arid3b	ENSMUST00000098686	protein_coding	alternative2	9	-1	57836793	1969
ENSMUSG00000097836	antisense	Gm26903	ENSMUST00000180749	antisense		9	-1	76015192	4583
ENSMUSG00000030283	protein_coding	St8sia1	ENSMUST00000032421	protein_coding	principal1	6	-1	142964452	8991
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000132825	processed_transcript		17	-1	70851131	522
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000127168	processed_transcript		2	-1	74533106	3430
ENSMUSG00000004661	protein_coding	Arid3b	ENSMUST00000170477	protein_coding		9	-1	57820627	367
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000190687	retained_intron		17	-1	70849814	3145
ENSMUSG00000049985	protein_coding	Ankrd55	ENSMUST00000223871	protein_coding		13	1	112318454	3209
ENSMUSG00000117229	lincRNA	Gm35550	ENSMUST00000232714	lincRNA		17	1	65905532	972
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000231283	protein_coding		16	-1	17576706	455
ENSMUSG00000117229	lincRNA	Gm35550	ENSMUST00000233592	lincRNA		17	1	65905547	502
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000125329	processed_transcript		17	-1	70849807	772
ENSMUSG00000004661	protein_coding	Arid3b	ENSMUST00000167670	retained_intron		9	-1	57836770	3057
ENSMUSG00000117229	lincRNA	Gm35550	ENSMUST00000233760	lincRNA		17	1	65913587	470
ENSMUSG00000030283	protein_coding	St8sia1	ENSMUST00000205149	nonsense_mediated_decay		6	-1	142964141	2159
ENSMUSG00000047407	protein_coding	Tgif1	ENSMUST00000172229	protein_coding		17	-1	70849790	1446
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000232336	protein_coding		16	-1	17576671	435
ENSMUSG00000040852	protein_coding	Plekhh2	ENSMUST00000047206	protein_coding	principal1	17	1	84511895	6882
ENSMUSG00000040828	protein_coding	Catsperd	ENSMUST00000232838	retained_intron		17	1	56628143	1325
ENSMUSG00000030283	protein_coding	St8sia1	ENSMUST00000147058	processed_transcript		6	-1	142883040	797
ENSMUSG00000049985	protein_coding	Ankrd55	ENSMUST00000056047	protein_coding		13	1	112288451	1556
ENSMUSG00000022756	protein_coding	Slc7a4	ENSMUST00000232186	protein_coding		16	-1	17583214	440
ENSMUSG00000004661	protein_coding	Arid3b	ENSMUST00000004780	protein_coding	principal2	9	-1	57834236	3785
ENSMUSG00000100865	transcribed_processed_pseudogene	Gm9320	ENSMUST00000176549	processed_transcript		17	1	70853767	443
ENSMUSG00000103705	antisense	4930518J20Rik	ENSMUST00000195064	antisense		1	1	156303489	1478
ENSMUSG00000071724	protein_coding	Smpd5	ENSMUST00000163991	protein_coding	principal1	15	1	76294348	1909
ENSMUSG00000100865	transcribed_processed_pseudogene	Gm9320	ENSMUST00000184151	transcribed_processed_pseudogene		17	1	70875840	473
ENSMUSG00000040852	protein_coding	Plekhh2	ENSMUST00000234573	retained_intron		17	1	84511923	2807
ENSMUSG00000026353	protein_coding	Ubxn4	ENSMUST00000027592	protein_coding	principal1	1	1	128244162	4113
ENSMUSG00000117121	TEC	Gm49902	ENSMUST00000233300	TEC		17	-1	70892909	1881
ENSMUSG00000071724	protein_coding	Smpd5	ENSMUST00000171192	nonsense_mediated_decay		15	1	76294968	739
ENSMUSG00000040852	protein_coding	Plekhh2	ENSMUST00000235090	retained_intron		17	1	84575550	663
ENSMUSG00000097154	lincRNA	Gm26510	ENSMUST00000189974	lincRNA		17	-1	70875935	683
ENSMUSG00000075210	protein_coding	Olfr1012	ENSMUST00000214255	protein_coding	principal1	2	-1	85762100	3115
ENSMUSG00000117391	antisense	4930500A05Rik	ENSMUST00000234638	antisense		17	-1	84551243	918
ENSMUSG00000038793	protein_coding	Lefty1	ENSMUST00000037361	protein_coding	principal1	1	1	180935022	1620
ENSMUSG00000071724	protein_coding	Smpd5	ENSMUST00000096370	retained_intron		15	1	76295251	1101
ENSMUSG00000075210	protein_coding	Olfr1012	ENSMUST00000214958	protein_coding	principal1	2	-1	85762766	3076
ENSMUSG00000117391	antisense	4930500A05Rik	ENSMUST00000234072	antisense		17	-1	84566824	477
ENSMUSG00000097154	lincRNA	Gm26510	ENSMUST00000180468	lincRNA		17	-1	70924996	1796
ENSMUSG00000071724	protein_coding	Smpd5	ENSMUST00000167433	retained_intron		15	1	76295309	344
ENSMUSG00000026353	protein_coding	Ubxn4	ENSMUST00000187031	retained_intron		1	1	128259504	828
ENSMUSG00000075210	protein_coding	Olfr1012	ENSMUST00000099916	protein_coding	principal1	2	-1	85760374	936
ENSMUSG00000038793	protein_coding	Lefty1	ENSMUST00000132087	retained_intron		1	1	180936871	583
ENSMUSG00000023055	protein_coding	Calcoco1	ENSMUST00000023818	protein_coding	principal1	15	-1	102722178	2824
ENSMUSG00000117647	antisense	Gm49969	ENSMUST00000234641	antisense		17	-1	84626395	1125
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000161132	protein_coding	alternative2	9	-1	15357788	7605
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000134641	processed_transcript		2	-1	74578931	2120
ENSMUSG00000080069	unprocessed_pseudogene	Gm41	ENSMUST00000116183	unprocessed_pseudogene		X	-1	86345845	1023
ENSMUSG00000026353	protein_coding	Ubxn4	ENSMUST00000189895	retained_intron		1	1	128274627	442
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000102676	protein_coding	alternative2	2	-1	74578223	1468
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000217140	protein_coding		9	-1	15318013	387
ENSMUSG00000023055	protein_coding	Calcoco1	ENSMUST00000168112	protein_coding		15	-1	102709902	1095
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000130586	protein_coding		2	-1	74579379	891
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000098979	protein_coding	principal2	9	-1	15357788	7188
ENSMUSG00000062157	protein_coding	Ifnlr1	ENSMUST00000074408	protein_coding	principal1	4	1	135686287	4182
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000130232	protein_coding		2	-1	74578517	783
ENSMUSG00000023055	protein_coding	Calcoco1	ENSMUST00000229231	protein_coding		15	-1	102719716	2226
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000155006	processed_transcript		2	-1	74554996	626
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000217407	retained_intron		9	-1	15324262	6154
ENSMUSG00000023055	protein_coding	Calcoco1	ENSMUST00000171838	protein_coding		15	-1	102722131	2968
ENSMUSG00000022634	protein_coding	Yaf2	ENSMUST00000080299	protein_coding	principal1	15	-1	93336808	1676
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000134764	processed_transcript		2	-1	74579435	387
ENSMUSG00000059379	protein_coding	Olfr1014	ENSMUST00000213453	protein_coding	principal1	2	1	85772713	2447
ENSMUSG00000031634	protein_coding	Ufsp2	ENSMUST00000034051	protein_coding	principal1	8	1	45975528	1640
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000160238	retained_intron		9	-1	15317957	534
ENSMUSG00000099632	antisense	2900093K20Rik	ENSMUST00000190930	antisense		2	1	163419795	567
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000145933	processed_transcript		2	-1	74551894	461
ENSMUSG00000023055	protein_coding	Calcoco1	ENSMUST00000230702	retained_intron		15	-1	102710060	462
ENSMUSG00000059379	protein_coding	Olfr1014	ENSMUST00000076250	protein_coding	principal1	2	1	85776586	918
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000159156	protein_coding	alternative2	9	-1	15326179	333
ENSMUSG00000100992	lincRNA	Gm23925	ENSMUST00000188429	lincRNA		2	-1	158359928	132
ENSMUSG00000023055	protein_coding	Calcoco1	ENSMUST00000230035	protein_coding		15	-1	102719716	1620
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000154706	processed_transcript		2	-1	74578916	4096
ENSMUSG00000085385	processed_transcript	Snhg17	ENSMUST00000186993	lincRNA		2	-1	158356843	3144
ENSMUSG00000053287	protein_coding	Olfr1013	ENSMUST00000216397	protein_coding	principal1	2	1	85767098	4925
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000145293	processed_transcript		2	-1	74578880	483
ENSMUSG00000022634	protein_coding	Yaf2	ENSMUST00000133736	nonsense_mediated_decay		15	-1	93336935	1870
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000162264	protein_coding	alternative2	9	-1	15331978	771
ENSMUSG00000023055	protein_coding	Calcoco1	ENSMUST00000166943	retained_intron		15	-1	102715796	863
ENSMUSG00000009207	protein_coding	Lnpk	ENSMUST00000134168	protein_coding		2	-1	74578894	499
ENSMUSG00000053287	protein_coding	Olfr1013	ENSMUST00000065626	protein_coding	principal1	2	1	85769803	918
ENSMUSG00000023055	protein_coding	Calcoco1	ENSMUST00000229398	nonsense_mediated_decay		15	-1	102719716	921
ENSMUSG00000033216	protein_coding	Eefsec	ENSMUST00000165242	protein_coding	principal2	6	-1	88446539	2679
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000161533	retained_intron		9	-1	15327076	681
ENSMUSG00000031634	protein_coding	Ufsp2	ENSMUST00000210081	nonsense_mediated_decay		8	1	45975534	926
ENSMUSG00000111120	unprocessed_pseudogene	Gm49332	ENSMUST00000215522	unprocessed_pseudogene		2	1	85777918	229
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000039165	protein_coding	principal3	2	-1	39065541	4869
ENSMUSG00000023055	protein_coding	Calcoco1	ENSMUST00000230374	retained_intron		15	-1	102714542	1732
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000163010	processed_transcript		9	-1	15350904	684
ENSMUSG00000033216	protein_coding	Eefsec	ENSMUST00000205179	protein_coding	alternative2	6	-1	88446527	2208
ENSMUSG00000035399	protein_coding	Oser1	ENSMUST00000046908	protein_coding	principal1	2	-1	163419528	1620
ENSMUSG00000031634	protein_coding	Ufsp2	ENSMUST00000130412	nonsense_mediated_decay		8	1	45975534	1613
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000162689	retained_intron		9	-1	15351434	2999
ENSMUSG00000116263	processed_pseudogene	Gm49473	ENSMUST00000229081	processed_pseudogene		15	-1	102795371	251
ENSMUSG00000046111	protein_coding	Cep295	ENSMUST00000160692	retained_intron		9	-1	15351815	672
ENSMUSG00000031634	protein_coding	Ufsp2	ENSMUST00000123041	retained_intron		8	1	45975544	603
ENSMUSG00000033216	protein_coding	Eefsec	ENSMUST00000203213	protein_coding		6	-1	88446514	796
ENSMUSG00000116500	lincRNA	Gm36560	ENSMUST00000229994	lincRNA		15	1	102797495	275
ENSMUSG00000031634	protein_coding	Ufsp2	ENSMUST00000123307	nonsense_mediated_decay		8	1	45975550	614
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000112850	protein_coding	alternative2	2	-1	39065488	4635
ENSMUSG00000035399	protein_coding	Oser1	ENSMUST00000140454	processed_transcript		2	-1	163419144	877
ENSMUSG00000033216	protein_coding	Eefsec	ENSMUST00000204459	protein_coding		6	-1	88446502	821
ENSMUSG00000102538	TEC	Gm37230	ENSMUST00000194491	TEC		9	-1	108191348	818
ENSMUSG00000035399	protein_coding	Oser1	ENSMUST00000139142	processed_transcript		2	-1	163411665	773
ENSMUSG00000031634	protein_coding	Ufsp2	ENSMUST00000209443	nonsense_mediated_decay		8	1	45975566	835
ENSMUSG00000035399	protein_coding	Oser1	ENSMUST00000141301	processed_transcript		2	-1	163424697	674
ENSMUSG00000033216	protein_coding	Eefsec	ENSMUST00000203886	protein_coding		6	-1	88439835	826
ENSMUSG00000005803	protein_coding	Sqor	ENSMUST00000005953	protein_coding	principal1	2	1	122765237	1804
ENSMUSG00000035399	protein_coding	Oser1	ENSMUST00000127038	protein_coding		2	-1	163417096	354
ENSMUSG00000031634	protein_coding	Ufsp2	ENSMUST00000150943	protein_coding		8	1	45975578	376
ENSMUSG00000033216	protein_coding	Eefsec	ENSMUST00000205014	nonsense_mediated_decay		6	-1	88446484	672
ENSMUSG00000005803	protein_coding	Sqor	ENSMUST00000124460	protein_coding		2	1	122765389	429
ENSMUSG00000031634	protein_coding	Ufsp2	ENSMUST00000210608	retained_intron		8	1	45992625	1905
ENSMUSG00000060985	protein_coding	Tdrd5	ENSMUST00000121146	protein_coding	principal2	1	-1	156303664	3759
ENSMUSG00000035399	protein_coding	Oser1	ENSMUST00000123659	processed_transcript		2	-1	163424550	475
ENSMUSG00000005803	protein_coding	Sqor	ENSMUST00000147475	protein_coding		2	1	122765391	323
ENSMUSG00000001655	protein_coding	Hoxc13	ENSMUST00000001700	protein_coding	principal1	15	1	102921103	2461
ENSMUSG00000107472	sense_intronic	Gm44265	ENSMUST00000203631	sense_intronic		6	-1	88353606	465
ENSMUSG00000035399	protein_coding	Oser1	ENSMUST00000104954	protein_coding	principal1	2	-1	163424697	1702
ENSMUSG00000031634	protein_coding	Ufsp2	ENSMUST00000151983	retained_intron		8	1	45995128	694
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000153914	nonsense_mediated_decay		2	-1	39053008	3834
ENSMUSG00000005803	protein_coding	Sqor	ENSMUST00000141698	processed_transcript		2	1	122765409	689
ENSMUSG00000040828	protein_coding	Catsperd	ENSMUST00000112979	protein_coding	principal1	17	1	56628151	2557
ENSMUSG00000060985	protein_coding	Tdrd5	ENSMUST00000167528	protein_coding	alternative2	1	-1	156303348	3210
ENSMUSG00000085385	processed_transcript	Snhg17	ENSMUST00000141809	lincRNA		2	-1	158361510	1553
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000124463	processed_transcript		2	-1	39018406	408
ENSMUSG00000060985	protein_coding	Tdrd5	ENSMUST00000193755	processed_transcript		1	-1	156263528	268
ENSMUSG00000005803	protein_coding	Sqor	ENSMUST00000176999	retained_intron		2	1	122771718	1703
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000204127	retained_intron		2	-1	39018566	457
ENSMUSG00000111339	processed_transcript	AC139579.1	ENSMUST00000214560	processed_transcript		7	1	102235854	606
ENSMUSG00000060985	protein_coding	Tdrd5	ENSMUST00000148277	retained_intron		1	-1	156274390	3673
ENSMUSG00000022758	protein_coding	P2rx6	ENSMUST00000171002	protein_coding		16	1	17561885	1353
ENSMUSG00000060985	protein_coding	Tdrd5	ENSMUST00000141760	protein_coding		1	-1	156303606	618
ENSMUSG00000004651	protein_coding	Tyr	ENSMUST00000004770	protein_coding	principal1	7	-1	87493512	6042
ENSMUSG00000050328	protein_coding	Hoxc12	ENSMUST00000055562	protein_coding	principal1	15	1	102936757	1031
ENSMUSG00000005803	protein_coding	Sqor	ENSMUST00000110506	protein_coding	principal1	2	1	122781999	1985
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000184996	nonsense_mediated_decay		2	-1	39065488	2894
ENSMUSG00000040828	protein_coding	Catsperd	ENSMUST00000233947	protein_coding		17	1	56651782	1617
ENSMUSG00000102372	TEC	A430050A11Rik	ENSMUST00000195348	TEC		1	-1	156290747	646
ENSMUSG00000005803	protein_coding	Sqor	ENSMUST00000147310	processed_transcript		2	1	122784944	467
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000154210	nonsense_mediated_decay		2	-1	39019561	386
ENSMUSG00000068015	protein_coding	Lrch1	ENSMUST00000088970	protein_coding	principal2	14	-1	74947866	4694
ENSMUSG00000050914	protein_coding	Ankrd37	ENSMUST00000053558	protein_coding	principal1	8	-1	45999867	927
ENSMUSG00000005803	protein_coding	Sqor	ENSMUST00000126403	nonsense_mediated_decay		2	1	122784961	1169
ENSMUSG00000022758	protein_coding	P2rx6	ENSMUST00000023441	protein_coding	principal1	16	1	17561885	2345
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000149842	retained_intron		2	-1	39019241	588
ENSMUSG00000004651	protein_coding	Tyr	ENSMUST00000207164	processed_transcript		7	-1	87493433	2333
ENSMUSG00000086903	lincRNA	Hotair	ENSMUST00000151949	lincRNA		15	-1	102947730	2006
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000147536	processed_transcript		7	1	102210208	390
ENSMUSG00000005803	protein_coding	Sqor	ENSMUST00000176343	protein_coding		2	1	122799762	741
ENSMUSG00000004651	protein_coding	Tyr	ENSMUST00000207834	protein_coding		7	-1	87493392	516
ENSMUSG00000022889	protein_coding	Mrpl39	ENSMUST00000116584	protein_coding	principal1	16	-1	84735742	2294
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000140631	protein_coding		7	1	102210335	372
ENSMUSG00000022758	protein_coding	P2rx6	ENSMUST00000231806	nonsense_mediated_decay		16	1	17561933	3382
ENSMUSG00000022889	protein_coding	Mrpl39	ENSMUST00000133901	retained_intron		16	-1	84735230	523
ENSMUSG00000068015	protein_coding	Lrch1	ENSMUST00000228134	processed_transcript		14	-1	74885255	2777
ENSMUSG00000005373	protein_coding	Mlxipl	ENSMUST00000201977	protein_coding		5	1	135106902	683
ENSMUSG00000068015	protein_coding	Lrch1	ENSMUST00000228252	protein_coding	alternative2	14	-1	74947876	3125
ENSMUSG00000115629	processed_pseudogene	Gm49235	ENSMUST00000227877	processed_pseudogene		15	-1	57488871	925
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000126520	retained_intron		2	-1	39065488	2614
ENSMUSG00000050914	protein_coding	Ankrd37	ENSMUST00000153674	nonsense_mediated_decay		8	-1	45999867	884
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000149810	protein_coding		2	-1	39056117	560
ENSMUSG00000068015	protein_coding	Lrch1	ENSMUST00000226799	protein_coding		14	-1	74806058	2678
ENSMUSG00000026754	protein_coding	Golga1	ENSMUST00000136261	retained_intron		2	-1	39065485	1494
ENSMUSG00000068015	protein_coding	Lrch1	ENSMUST00000230218	processed_transcript		14	-1	74794991	148
ENSMUSG00000085385	processed_transcript	Snhg17	ENSMUST00000152125	lincRNA		2	-1	158361519	1046
ENSMUSG00000102922	processed_pseudogene	Gm34176	ENSMUST00000192621	processed_pseudogene		1	1	178755808	474
ENSMUSG00000009670	protein_coding	Tex11	ENSMUST00000113718	protein_coding	alternative2	X	-1	101059667	3278
ENSMUSG00000085385	processed_transcript	Snhg17	ENSMUST00000154030	retained_intron		2	-1	158361522	2007
ENSMUSG00000050914	protein_coding	Ankrd37	ENSMUST00000131008	retained_intron		8	-1	45999566	827
ENSMUSG00000026494	protein_coding	Kif26b	ENSMUST00000193931	retained_intron		1	1	178529125	2135
ENSMUSG00000050914	protein_coding	Ankrd37	ENSMUST00000144525	retained_intron		8	-1	45997868	416
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000171340	protein_coding	principal1	15	-1	76307101	4081
ENSMUSG00000068015	protein_coding	Lrch1	ENSMUST00000229311	processed_transcript		14	-1	74795305	121
ENSMUSG00000068015	protein_coding	Lrch1	ENSMUST00000230381	processed_transcript		14	-1	74795305	74
ENSMUSG00000050914	protein_coding	Ankrd37	ENSMUST00000210971	processed_transcript		8	-1	46005707	420
ENSMUSG00000068015	protein_coding	Lrch1	ENSMUST00000227433	processed_transcript		14	-1	74899722	1327
ENSMUSG00000039263	protein_coding	Npepl1	ENSMUST00000044415	protein_coding	principal1	2	1	174110349	2467
ENSMUSG00000050914	protein_coding	Ankrd37	ENSMUST00000141334	retained_intron		8	-1	45999849	743
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000170261	retained_intron		15	-1	76297492	792
ENSMUSG00000085385	processed_transcript	Snhg17	ENSMUST00000133449	lincRNA		2	-1	158361580	933
ENSMUSG00000009670	protein_coding	Tex11	ENSMUST00000113716	protein_coding	alternative2	X	-1	101059667	2591
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000230735	processed_transcript		15	-1	76302133	657
ENSMUSG00000036960	protein_coding	Clca2	ENSMUST00000040465	protein_coding	principal2	3	-1	145099104	3986
ENSMUSG00000053841	protein_coding	Txlna	ENSMUST00000142577	retained_intron		4	-1	129640640	4918
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000169664	retained_intron		15	-1	76298040	596
ENSMUSG00000082215	processed_pseudogene	Gm14314	ENSMUST00000118225	processed_pseudogene		2	-1	179021133	1015
ENSMUSG00000039263	protein_coding	Npepl1	ENSMUST00000125502	nonsense_mediated_decay		2	1	174111154	906
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000170063	retained_intron		15	-1	76301115	437
ENSMUSG00000085385	processed_transcript	Snhg17	ENSMUST00000149667	retained_intron		2	-1	158361513	3896
ENSMUSG00000028842	protein_coding	Ago3	ENSMUST00000132123	protein_coding		4	-1	126350320	682
ENSMUSG00000036960	protein_coding	Clca2	ENSMUST00000198993	protein_coding	alternative2	3	-1	145099106	2774
ENSMUSG00000085385	processed_transcript	Snhg17	ENSMUST00000154242	lincRNA		2	-1	158358464	346
ENSMUSG00000009670	protein_coding	Tex11	ENSMUST00000009814	protein_coding	principal3	X	-1	101059639	3250
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000163127	retained_intron		15	-1	76302362	705
ENSMUSG00000085385	processed_transcript	Snhg17	ENSMUST00000151331	lincRNA		2	-1	158361475	529
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000164189	protein_coding		15	-1	76307389	2773
ENSMUSG00000061897	processed_pseudogene	Gm14292	ENSMUST00000118761	processed_pseudogene		2	1	179177425	456
ENSMUSG00000036960	protein_coding	Clca2	ENSMUST00000197121	processed_transcript		3	-1	145099443	331
ENSMUSG00000085385	processed_transcript	Snhg17	ENSMUST00000138592	lincRNA		2	-1	158361542	342
ENSMUSG00000031938	protein_coding	4931406C07Rik	ENSMUST00000180339	protein_coding	principal1	9	-1	15306448	2756
ENSMUSG00000022635	protein_coding	Zcrb1	ENSMUST00000162160	protein_coding	alternative1	15	-1	93398301	850
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000163977	processed_transcript		15	-1	76303200	492
ENSMUSG00000081481	processed_pseudogene	Gm14293	ENSMUST00000118528	processed_pseudogene		2	1	179240490	577
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000210024	protein_coding		15	-1	76309755	761
ENSMUSG00000114925	lincRNA	Gm47212	ENSMUST00000223651	lincRNA		14	1	68218253	534
ENSMUSG00000039263	protein_coding	Npepl1	ENSMUST00000153957	retained_intron		2	1	174111180	2052
ENSMUSG00000081882	processed_pseudogene	Gm14294	ENSMUST00000119749	processed_pseudogene		2	1	179364293	751
ENSMUSG00000039263	protein_coding	Npepl1	ENSMUST00000136449	retained_intron		2	1	174111573	437
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000165279	protein_coding		15	-1	76328015	800
ENSMUSG00000109998	antisense	Gm45437	ENSMUST00000211418	antisense		7	-1	45632809	694
ENSMUSG00000109998	antisense	Gm45437	ENSMUST00000209998	antisense		7	-1	45633077	448
ENSMUSG00000031938	protein_coding	4931406C07Rik	ENSMUST00000034414	protein_coding	principal1	9	-1	15301556	2562
ENSMUSG00000022562	protein_coding	Oplah	ENSMUST00000023222	protein_coding	principal1	15	-1	76307245	3970
ENSMUSG00000022635	protein_coding	Zcrb1	ENSMUST00000076070	protein_coding	principal3	15	-1	93398334	877
ENSMUSG00000081831	processed_pseudogene	Gm7405	ENSMUST00000121476	processed_pseudogene		X	-1	113227320	1337
ENSMUSG00000031938	protein_coding	4931406C07Rik	ENSMUST00000178977	protein_coding	principal1	9	-1	15306167	2650
ENSMUSG00000039138	lincRNA	4930591A17Rik	ENSMUST00000041998	lincRNA		2	1	179414936	737
ENSMUSG00000115019	lincRNA	Gm4278	ENSMUST00000228599	lincRNA		14	1	74975086	1456
ENSMUSG00000031938	protein_coding	4931406C07Rik	ENSMUST00000216955	protein_coding		9	-1	15306130	1750
ENSMUSG00000074555	antisense	Gm10714	ENSMUST00000131346	antisense		2	-1	174183918	874
ENSMUSG00000022635	protein_coding	Zcrb1	ENSMUST00000160407	retained_intron		15	-1	93391183	496
ENSMUSG00000074555	antisense	Gm10714	ENSMUST00000166709	antisense		2	-1	174125888	186
ENSMUSG00000021981	protein_coding	Cab39l	ENSMUST00000225149	processed_transcript		14	1	59440972	372
ENSMUSG00000031938	protein_coding	4931406C07Rik	ENSMUST00000216077	retained_intron		9	-1	15289568	2163
ENSMUSG00000022635	protein_coding	Zcrb1	ENSMUST00000159723	retained_intron		15	-1	93391380	693
ENSMUSG00000031938	protein_coding	4931406C07Rik	ENSMUST00000217042	protein_coding		9	-1	15301514	691
ENSMUSG00000034259	protein_coding	Exosc4	ENSMUST00000059045	protein_coding	principal1	15	1	76327397	1796
ENSMUSG00000022635	protein_coding	Zcrb1	ENSMUST00000159105	retained_intron		15	-1	93388144	434
ENSMUSG00000028842	protein_coding	Ago3	ENSMUST00000069097	protein_coding	principal1	4	-1	126429556	15595
ENSMUSG00000031938	protein_coding	4931406C07Rik	ENSMUST00000213317	retained_intron		9	-1	15306110	919
ENSMUSG00000034259	protein_coding	Exosc4	ENSMUST00000230512	nonsense_mediated_decay		15	1	76327465	1728
ENSMUSG00000031938	protein_coding	4931406C07Rik	ENSMUST00000216073	retained_intron		9	-1	15306139	1649
ENSMUSG00000028842	protein_coding	Ago3	ENSMUST00000127831	protein_coding		4	-1	126350902	433
ENSMUSG00000022635	protein_coding	Zcrb1	ENSMUST00000161955	retained_intron		15	-1	93391670	436
ENSMUSG00000031938	protein_coding	4931406C07Rik	ENSMUST00000215741	retained_intron		9	-1	15306137	3504
ENSMUSG00000039952	protein_coding	Dag1	ENSMUST00000191899	protein_coding	principal1	9	-1	108263958	5662
ENSMUSG00000034259	protein_coding	Exosc4	ENSMUST00000167515	processed_transcript		15	1	76327591	288
ENSMUSG00000022635	protein_coding	Zcrb1	ENSMUST00000161409	nonsense_mediated_decay		15	-1	93398334	624
ENSMUSG00000028842	protein_coding	Ago3	ENSMUST00000151179	processed_transcript		4	-1	126404294	625
ENSMUSG00000039952	protein_coding	Dag1	ENSMUST00000080435	protein_coding	principal1	9	-1	108263815	4364
ENSMUSG00000028842	protein_coding	Ago3	ENSMUST00000155645	processed_transcript		4	-1	126404335	690
ENSMUSG00000022635	protein_coding	Zcrb1	ENSMUST00000159719	retained_intron		15	-1	93398273	1744
ENSMUSG00000024098	protein_coding	Twsg1	ENSMUST00000233580	protein_coding	principal1	17	-1	65951115	1850
ENSMUSG00000021981	protein_coding	Cab39l	ENSMUST00000224281	retained_intron		14	1	59440981	3546
ENSMUSG00000024981	protein_coding	Acsl5	ENSMUST00000225551	protein_coding		19	1	55251938	520
ENSMUSG00000028842	protein_coding	Ago3	ENSMUST00000123233	processed_transcript		4	-1	126429541	613
ENSMUSG00000059106	protein_coding	Olfr961	ENSMUST00000219295	protein_coding	principal1	9	1	39645085	3374
ENSMUSG00000024981	protein_coding	Acsl5	ENSMUST00000224337	nonsense_mediated_decay		19	1	55251960	529
ENSMUSG00000024098	protein_coding	Twsg1	ENSMUST00000024906	protein_coding	principal1	17	-1	65951226	4086
ENSMUSG00000059106	protein_coding	Olfr961	ENSMUST00000076548	protein_coding	principal1	9	1	39646724	949
ENSMUSG00000039952	protein_coding	Dag1	ENSMUST00000166905	protein_coding	principal1	9	-1	108263918	4244
ENSMUSG00000024098	protein_coding	Twsg1	ENSMUST00000233663	protein_coding		17	-1	65926409	406
ENSMUSG00000111573	unprocessed_pseudogene	Olfr962-ps1	ENSMUST00000217332	unprocessed_pseudogene		9	1	39658301	442
ENSMUSG00000026494	protein_coding	Kif26b	ENSMUST00000161017	protein_coding	principal2	1	1	178529125	13749
ENSMUSG00000024098	protein_coding	Twsg1	ENSMUST00000233855	processed_transcript		17	-1	65951137	352
ENSMUSG00000089702	antisense	Gm16568	ENSMUST00000066038	antisense		9	1	15330573	1910
ENSMUSG00000039952	protein_coding	Dag1	ENSMUST00000171412	protein_coding	principal1	9	-1	108263736	4415
ENSMUSG00000044562	protein_coding	Rasip1	ENSMUST00000057927	protein_coding	principal1	7	1	45627488	3202
ENSMUSG00000026494	protein_coding	Kif26b	ENSMUST00000160789	protein_coding	alternative2	1	1	178798438	6216
ENSMUSG00000053841	protein_coding	Txlna	ENSMUST00000084264	protein_coding	principal1	4	-1	129640805	4847
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000081339	protein_coding	principal1	17	1	32036100	4874
ENSMUSG00000039952	protein_coding	Dag1	ENSMUST00000195429	protein_coding		9	-1	108263751	509
ENSMUSG00000089713	antisense	Gm16564	ENSMUST00000162545	antisense		1	-1	178917614	3010
ENSMUSG00000039952	protein_coding	Dag1	ENSMUST00000194698	protein_coding		9	-1	108263709	472
ENSMUSG00000110357	antisense	A030001D20Rik	ENSMUST00000211533	antisense		7	-1	45638765	1542
ENSMUSG00000039952	protein_coding	Dag1	ENSMUST00000193701	retained_intron		9	-1	108263751	445
ENSMUSG00000031637	protein_coding	Lrp2bp	ENSMUST00000110380	protein_coding	principal1	8	1	45999303	1603
ENSMUSG00000031637	protein_coding	Lrp2bp	ENSMUST00000066451	protein_coding		8	1	45999308	1525
ENSMUSG00000053841	protein_coding	Txlna	ENSMUST00000133803	protein_coding		4	-1	129641065	989
ENSMUSG00000031637	protein_coding	Lrp2bp	ENSMUST00000110381	protein_coding	principal1	8	1	46010602	3421
ENSMUSG00000053841	protein_coding	Txlna	ENSMUST00000154105	protein_coding		4	-1	129640978	791
ENSMUSG00000001656	protein_coding	Hoxc11	ENSMUST00000001701	protein_coding	principal1	15	1	102954427	2021
ENSMUSG00000053841	protein_coding	Txlna	ENSMUST00000132217	protein_coding		4	-1	129640959	781
ENSMUSG00000064158	protein_coding	Izumo1	ENSMUST00000033100	protein_coding	principal1	7	1	45621811	1493
ENSMUSG00000053841	protein_coding	Txlna	ENSMUST00000130017	protein_coding		4	-1	129640960	684
ENSMUSG00000031637	protein_coding	Lrp2bp	ENSMUST00000145597	nonsense_mediated_decay		8	1	46010611	1799
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000145975	protein_coding	alternative2	10	-1	78043580	1926
ENSMUSG00000059383	protein_coding	Gfral	ENSMUST00000184693	nonsense_mediated_decay		9	-1	76213657	1829
ENSMUSG00000064158	protein_coding	Izumo1	ENSMUST00000209590	retained_intron		7	1	45624393	2330
ENSMUSG00000031637	protein_coding	Lrp2bp	ENSMUST00000138230	retained_intron		8	1	46011750	650
ENSMUSG00000053841	protein_coding	Txlna	ENSMUST00000046425	protein_coding	principal1	4	-1	129641065	4569
ENSMUSG00000031637	protein_coding	Lrp2bp	ENSMUST00000132341	nonsense_mediated_decay		8	1	46022480	2697
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000236329	nonsense_mediated_decay		17	1	32036391	1580
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000156164	retained_intron		17	1	32036403	534
ENSMUSG00000021981	protein_coding	Cab39l	ENSMUST00000022553	protein_coding	principal1	14	1	59440981	3037
ENSMUSG00000024981	protein_coding	Acsl5	ENSMUST00000043150	protein_coding	principal1	19	1	55253369	4243
ENSMUSG00000117889	lincRNA	A730085E03Rik	ENSMUST00000237660	lincRNA		18	1	69198121	704
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000238133	nonsense_mediated_decay		17	1	32036410	1541
ENSMUSG00000021981	protein_coding	Cab39l	ENSMUST00000225595	protein_coding		14	1	59440981	1380
ENSMUSG00000024981	protein_coding	Acsl5	ENSMUST00000225454	protein_coding		19	1	55272870	432
ENSMUSG00000059383	protein_coding	Gfral	ENSMUST00000074880	protein_coding	principal1	9	-1	76213657	2080
ENSMUSG00000117970	lincRNA	Gm4402	ENSMUST00000237758	lincRNA		18	1	69217501	3126
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000237131	nonsense_mediated_decay		17	1	32036424	544
ENSMUSG00000024981	protein_coding	Acsl5	ENSMUST00000226019	retained_intron		19	1	55284334	358
ENSMUSG00000021981	protein_coding	Cab39l	ENSMUST00000223678	protein_coding		14	1	59459138	623
ENSMUSG00000024981	protein_coding	Acsl5	ENSMUST00000224414	protein_coding		19	1	55294227	455
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000151808	nonsense_mediated_decay		17	1	32036429	719
ENSMUSG00000019916	protein_coding	P4ha1	ENSMUST00000009789	protein_coding	principal3	10	1	59323296	4043
ENSMUSG00000021981	protein_coding	Cab39l	ENSMUST00000224893	protein_coding		14	1	59478816	496
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000130972	protein_coding	alternative2	10	-1	78043580	1923
ENSMUSG00000098060	processed_pseudogene	Gm4842	ENSMUST00000183237	processed_pseudogene		18	1	69256288	835
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000147076	retained_intron		17	1	32048285	4487
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000139666	protein_coding	principal2	17	1	13760548	7732
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000236425	nonsense_mediated_decay		17	1	32048603	697
ENSMUSG00000019916	protein_coding	P4ha1	ENSMUST00000092512	protein_coding		10	1	59323364	2387
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000149746	retained_intron		17	1	32048807	994
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000150151	retained_intron		17	1	32050019	594
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000150469	processed_transcript		17	1	32051804	578
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000136094	retained_intron		17	1	32052272	821
ENSMUSG00000019916	protein_coding	P4ha1	ENSMUST00000105466	protein_coding	alternative1	10	1	59323368	2918
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000137708	protein_coding	alternative2	17	1	13760599	5153
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000137917	processed_transcript		17	1	32055919	619
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000150187	retained_intron		17	1	32058289	666
ENSMUSG00000018566	protein_coding	Slc2a4	ENSMUST00000178809	retained_intron		11	-1	69948175	3193
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000137784	protein_coding	alternative2	17	1	13760599	5684
ENSMUSG00000058392	protein_coding	Rrp1b	ENSMUST00000126602	retained_intron		17	1	32059168	489
ENSMUSG00000109467	processed_pseudogene	Gm30646	ENSMUST00000207662	processed_pseudogene		7	1	30432544	180
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000150848	protein_coding	alternative2	17	1	13760674	5418
ENSMUSG00000091548	processed_pseudogene	Gm17572	ENSMUST00000171455	processed_pseudogene		17	1	31950534	408
ENSMUSG00000036139	protein_coding	Hoxc9	ENSMUST00000173306	protein_coding		15	1	102976439	634
ENSMUSG00000107695	processed_pseudogene	Gm44289	ENSMUST00000204144	processed_pseudogene		6	1	66254743	1390
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000137495	processed_transcript		17	1	13761605	3246
ENSMUSG00000107653	transcribed_processed_pseudogene	Gm31520	ENSMUST00000204874	processed_transcript		6	1	66264155	647
ENSMUSG00000098470	protein_coding	C1rb	ENSMUST00000184647	protein_coding	principal1	6	1	124570294	2429
ENSMUSG00000107653	transcribed_processed_pseudogene	Gm31520	ENSMUST00000203574	processed_transcript		6	1	66272505	1524
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000137503	retained_intron		17	1	13850962	593
ENSMUSG00000082969	processed_pseudogene	Gm12630	ENSMUST00000121575	processed_pseudogene		4	-1	86818577	784
ENSMUSG00000107653	transcribed_processed_pseudogene	Gm31520	ENSMUST00000203048	transcribed_processed_pseudogene		6	1	66283507	733
ENSMUSG00000036139	protein_coding	Hoxc9	ENSMUST00000001706	protein_coding	principal1	15	1	102977032	2374
ENSMUSG00000089961	antisense	Gm16567	ENSMUST00000160967	antisense		6	1	124530911	576
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000141640	processed_transcript		17	1	13851733	779
ENSMUSG00000026519	protein_coding	Tmem63a	ENSMUST00000161847	protein_coding		1	1	180942344	488
ENSMUSG00000026519	protein_coding	Tmem63a	ENSMUST00000162283	nonsense_mediated_decay		1	1	180942458	469
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000128241	protein_coding	principal3	10	-1	78043580	1938
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000239324	protein_coding		17	1	13867616	327
ENSMUSG00000107568	unprocessed_pseudogene	Gm18840	ENSMUST00000204553	unprocessed_pseudogene		6	1	124561215	506
ENSMUSG00000002076	protein_coding	Hsf2bp	ENSMUST00000238192	protein_coding	principal2	17	-1	32036349	3115
ENSMUSG00000107837	processed_pseudogene	Gm44281	ENSMUST00000203090	processed_pseudogene		6	-1	66398716	166
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000136087	processed_transcript		17	1	13874907	241
ENSMUSG00000002076	protein_coding	Hsf2bp	ENSMUST00000237527	processed_transcript		17	-1	32020128	1195
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000123030	retained_intron		17	1	13881886	427
ENSMUSG00000072663	protein_coding	Spef2	ENSMUST00000160236	protein_coding	alternative2	15	-1	9748838	5313
ENSMUSG00000107631	processed_pseudogene	Gm44233	ENSMUST00000203616	processed_pseudogene		6	1	66398746	226
ENSMUSG00000002076	protein_coding	Hsf2bp	ENSMUST00000133308	protein_coding	alternative2	17	-1	32034537	1479
ENSMUSG00000022484	protein_coding	Hoxc10	ENSMUST00000001699	protein_coding	principal1	15	1	102966796	1909
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000137531	protein_coding		17	1	13888530	1210
ENSMUSG00000027312	protein_coding	Atrn	ENSMUST00000028781	protein_coding	principal1	2	1	130906495	8745
ENSMUSG00000072663	protein_coding	Spef2	ENSMUST00000208854	protein_coding	alternative2	15	-1	9748838	7038
ENSMUSG00000107479	lincRNA	2610300M13Rik	ENSMUST00000203716	lincRNA		6	-1	66465699	1787
ENSMUSG00000056342	protein_coding	Usp34	ENSMUST00000137823	protein_coding		11	1	23306916	11363
ENSMUSG00000002076	protein_coding	Hsf2bp	ENSMUST00000236321	processed_transcript		17	-1	32024029	1480
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000124188	retained_intron		17	1	13888854	610
ENSMUSG00000107479	lincRNA	2610300M13Rik	ENSMUST00000203449	lincRNA		6	-1	66465738	479
ENSMUSG00000002076	protein_coding	Hsf2bp	ENSMUST00000138172	processed_transcript		17	-1	32023205	387
ENSMUSG00000002076	protein_coding	Hsf2bp	ENSMUST00000002145	protein_coding	principal2	17	-1	32034508	2867
ENSMUSG00000056342	protein_coding	Usp34	ENSMUST00000125701	processed_transcript		11	1	23486805	399
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000133422	retained_intron		17	1	13898662	1167
ENSMUSG00000056342	protein_coding	Usp34	ENSMUST00000129368	protein_coding		11	1	23470289	865
ENSMUSG00000107775	processed_pseudogene	Gm19764	ENSMUST00000203630	processed_pseudogene		6	1	66515893	649
ENSMUSG00000001657	protein_coding	Hoxc8	ENSMUST00000001703	protein_coding	principal1	15	1	102990607	1868
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000143548	retained_intron		10	-1	78038258	1265
ENSMUSG00000072663	protein_coding	Spef2	ENSMUST00000041840	protein_coding	principal2	15	-1	9748868	4247
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000124922	processed_transcript		17	1	13898824	2662
ENSMUSG00000079343	protein_coding	C1s2	ENSMUST00000068797	protein_coding	alternative2	6	-1	124636085	2662
ENSMUSG00000001657	protein_coding	Hoxc8	ENSMUST00000189484	retained_intron		15	1	102991889	2223
ENSMUSG00000056121	protein_coding	Fez2	ENSMUST00000234052	protein_coding		17	-1	78418096	3711
ENSMUSG00000108086	processed_pseudogene	Gm6786	ENSMUST00000203165	processed_pseudogene		6	1	66527014	1915
ENSMUSG00000027312	protein_coding	Atrn	ENSMUST00000134964	retained_intron		2	1	130906501	4668
ENSMUSG00000068036	protein_coding	Afdn	ENSMUST00000170827	protein_coding	alternative2	17	1	13760541	7338
ENSMUSG00000079343	protein_coding	C1s2	ENSMUST00000218020	protein_coding	principal2	6	-1	124636085	2662
ENSMUSG00000027312	protein_coding	Atrn	ENSMUST00000156982	retained_intron		2	1	130906931	530
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000131028	nonsense_mediated_decay		10	-1	78043610	2966
ENSMUSG00000056121	protein_coding	Fez2	ENSMUST00000234029	protein_coding		17	-1	78418083	1516
ENSMUSG00000022485	protein_coding	Hoxc5	ENSMUST00000174869	processed_transcript		15	1	102967443	615
ENSMUSG00000027312	protein_coding	Atrn	ENSMUST00000132557	retained_intron		2	1	130982785	637
ENSMUSG00000060417	unprocessed_pseudogene	Gm8603	ENSMUST00000115649	unprocessed_pseudogene		17	1	13516755	1515
ENSMUSG00000027312	protein_coding	Atrn	ENSMUST00000151364	retained_intron		2	1	130996177	4139
ENSMUSG00000056121	protein_coding	Fez2	ENSMUST00000234530	protein_coding	alternative1	17	-1	78418083	2001
ENSMUSG00000072663	protein_coding	Spef2	ENSMUST00000159093	protein_coding		15	-1	9748820	1917
ENSMUSG00000056342	protein_coding	Usp34	ENSMUST00000148927	processed_transcript		11	1	23458077	237
ENSMUSG00000069622	processed_pseudogene	Gm10273	ENSMUST00000092511	processed_pseudogene		10	1	59395755	630
ENSMUSG00000056342	protein_coding	Usp34	ENSMUST00000129521	processed_transcript		11	1	23457938	585
ENSMUSG00000083953	processed_pseudogene	Gm14049	ENSMUST00000121009	processed_pseudogene		2	1	130987984	636
ENSMUSG00000072663	protein_coding	Spef2	ENSMUST00000162780	protein_coding		15	-1	9748820	1639
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000155021	protein_coding	alternative2	10	-1	78043580	1737
ENSMUSG00000022485	protein_coding	Hoxc5	ENSMUST00000001709	protein_coding	principal1	15	1	103013815	2923
ENSMUSG00000056342	protein_coding	Usp34	ENSMUST00000130131	protein_coding		11	1	23420055	4439
ENSMUSG00000040723	protein_coding	Rcsd1	ENSMUST00000097474	protein_coding	alternative2	1	-1	165708086	5001
ENSMUSG00000072663	protein_coding	Spef2	ENSMUST00000159368	protein_coding		15	-1	9748777	1422
ENSMUSG00000056342	protein_coding	Usp34	ENSMUST00000155984	processed_transcript		11	1	23414976	4327
ENSMUSG00000056121	protein_coding	Fez2	ENSMUST00000070039	protein_coding	principal3	17	-1	78418131	1939
ENSMUSG00000056342	protein_coding	Usp34	ENSMUST00000180046	protein_coding	principal1	11	1	23306895	12200
ENSMUSG00000001661	protein_coding	Hoxc6	ENSMUST00000173210	processed_transcript		15	1	102998257	896
ENSMUSG00000001661	protein_coding	Hoxc6	ENSMUST00000173421	processed_transcript		15	1	103000529	538
ENSMUSG00000103698	processed_pseudogene	Gm17877	ENSMUST00000192578	processed_pseudogene		3	-1	9972001	814
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000034415	protein_coding	principal3	9	1	15306214	1148
ENSMUSG00000056121	protein_coding	Fez2	ENSMUST00000112487	protein_coding	alternative1	17	-1	78418152	2041
ENSMUSG00000056121	protein_coding	Fez2	ENSMUST00000234601	processed_transcript		17	-1	78401430	1695
ENSMUSG00000056121	protein_coding	Fez2	ENSMUST00000234067	retained_intron		17	-1	78417691	2017
ENSMUSG00000056121	protein_coding	Fez2	ENSMUST00000234900	retained_intron		17	-1	78402535	2217
ENSMUSG00000040723	protein_coding	Rcsd1	ENSMUST00000040357	protein_coding	principal4	1	-1	165708048	2622
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000140636	protein_coding		10	-1	78043580	1615
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000214054	nonsense_mediated_decay		9	1	15306248	3126
ENSMUSG00000001661	protein_coding	Hoxc6	ENSMUST00000001711	protein_coding	principal1	15	1	103009573	1581
ENSMUSG00000040723	protein_coding	Rcsd1	ENSMUST00000193714	protein_coding		1	-1	165709393	509
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000215124	protein_coding		9	1	15306258	629
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000148469	protein_coding		10	-1	78043580	1618
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000019257	protein_coding	alternative2	10	-1	78043580	1926
ENSMUSG00000040723	protein_coding	Rcsd1	ENSMUST00000192566	retained_intron		1	-1	165709726	5205
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000216256	retained_intron		9	1	15306260	1702
ENSMUSG00000040723	protein_coding	Rcsd1	ENSMUST00000195045	processed_transcript		1	-1	165709757	1200
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000105395	protein_coding		10	-1	78043580	1630
ENSMUSG00000032360	protein_coding	Hcrtr2	ENSMUST00000063140	protein_coding	principal2	9	-1	76323611	3761
ENSMUSG00000005373	protein_coding	Mlxipl	ENSMUST00000142385	nonsense_mediated_decay		5	1	135106904	3344
ENSMUSG00000040086	protein_coding	Tnni3k	ENSMUST00000143410	nonsense_mediated_decay		3	-1	155055407	2762
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000156417	protein_coding		10	-1	78043580	1627
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000105396	protein_coding	alternative2	10	-1	78043580	1749
ENSMUSG00000032360	protein_coding	Hcrtr2	ENSMUST00000184757	protein_coding	alternative1	9	-1	76323856	2230
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000214221	retained_intron		9	1	15306260	2818
ENSMUSG00000032360	protein_coding	Hcrtr2	ENSMUST00000184200	retained_intron		9	-1	76323322	1647
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000143735	nonsense_mediated_decay		10	-1	78043572	1936
ENSMUSG00000098894	antisense	Gm27234	ENSMUST00000183362	antisense		9	1	76319577	581
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000154374	protein_coding	alternative2	10	-1	78043580	1712
ENSMUSG00000040086	protein_coding	Tnni3k	ENSMUST00000064076	protein_coding	principal1	3	-1	155055407	3034
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000143452	retained_intron		10	-1	78038260	632
ENSMUSG00000027702	protein_coding	Lrrc34	ENSMUST00000029252	protein_coding	principal1	3	-1	30647869	1891
ENSMUSG00000000731	protein_coding	Aire	ENSMUST00000141255	retained_intron		10	-1	78041717	1077
ENSMUSG00000071714	protein_coding	Csf2rb2	ENSMUST00000096356	protein_coding	principal1	15	-1	78305721	4740
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000213763	nonsense_mediated_decay		9	1	15306260	1216
ENSMUSG00000006651	protein_coding	Aplp1	ENSMUST00000006828	protein_coding	principal1	7	-1	30445535	2343
ENSMUSG00000021982	protein_coding	Cdadc1	ENSMUST00000225839	protein_coding	alternative2	14	-1	59597939	3189
ENSMUSG00000071714	protein_coding	Csf2rb2	ENSMUST00000230115	protein_coding		15	-1	78305622	3375
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000213923	retained_intron		9	1	15306260	2339
ENSMUSG00000032172	protein_coding	Olfm2	ENSMUST00000034692	protein_coding		9	-1	20728229	1836
ENSMUSG00000021982	protein_coding	Cdadc1	ENSMUST00000167100	protein_coding	alternative2	14	-1	59597959	2243
ENSMUSG00000071714	protein_coding	Csf2rb2	ENSMUST00000230753	nonsense_mediated_decay		15	-1	78287947	765
ENSMUSG00000040086	protein_coding	Tnni3k	ENSMUST00000146952	retained_intron		3	-1	155055350	738
ENSMUSG00000038024	protein_coding	Dennd4c	ENSMUST00000082026	protein_coding	alternative2	4	1	86748555	7940
ENSMUSG00000071714	protein_coding	Csf2rb2	ENSMUST00000230932	processed_transcript		15	-1	78305620	690
ENSMUSG00000032172	protein_coding	Olfm2	ENSMUST00000215999	protein_coding		9	-1	20746349	1895
ENSMUSG00000038024	protein_coding	Dennd4c	ENSMUST00000142837	protein_coding	principal2	4	1	86774255	5870
ENSMUSG00000118443	unitary_pseudogene	Gm18589	ENSMUST00000238360	unitary_pseudogene		3	1	154839607	1538
ENSMUSG00000021982	protein_coding	Cdadc1	ENSMUST00000056997	protein_coding	principal3	14	-1	59597944	2202
ENSMUSG00000032172	protein_coding	Olfm2	ENSMUST00000217198	protein_coding	principal1	9	-1	20726937	2005
ENSMUSG00000006651	protein_coding	Aplp1	ENSMUST00000208792	retained_intron		7	-1	30445489	2472
ENSMUSG00000032358	protein_coding	Fam83b	ENSMUST00000183437	protein_coding	principal1	9	-1	76567116	3879
ENSMUSG00000006651	protein_coding	Aplp1	ENSMUST00000208404	retained_intron		7	-1	30437003	496
ENSMUSG00000032172	protein_coding	Olfm2	ENSMUST00000215039	retained_intron		9	-1	20673131	528
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000164079	protein_coding	alternative2	9	1	15306264	1005
ENSMUSG00000038024	protein_coding	Dennd4c	ENSMUST00000128710	processed_transcript		4	1	86777843	404
ENSMUSG00000102238	TEC	Gm37890	ENSMUST00000195610	TEC		3	1	154921296	3992
ENSMUSG00000021982	protein_coding	Cdadc1	ENSMUST00000171683	protein_coding	alternative2	14	-1	59597944	1892
ENSMUSG00000006651	protein_coding	Aplp1	ENSMUST00000207514	retained_intron		7	-1	30440432	476
ENSMUSG00000032358	protein_coding	Fam83b	ENSMUST00000098546	protein_coding	principal1	9	-1	76545804	3136
ENSMUSG00000032606	protein_coding	Nicn1	ENSMUST00000035227	protein_coding	principal1	9	1	108290429	2133
ENSMUSG00000038024	protein_coding	Dennd4c	ENSMUST00000045512	protein_coding	alternative2	4	1	86748555	5648
ENSMUSG00000020485	protein_coding	Supt4a	ENSMUST00000093955	protein_coding	principal1	11	1	87737552	706
ENSMUSG00000027703	protein_coding	Lrriq4	ENSMUST00000108267	protein_coding	principal3	3	1	30644507	2387
ENSMUSG00000032606	protein_coding	Nicn1	ENSMUST00000194496	retained_intron		9	1	108290444	428
ENSMUSG00000006651	protein_coding	Aplp1	ENSMUST00000209054	retained_intron		7	-1	30444596	811
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000216109	protein_coding		9	1	15306329	612
ENSMUSG00000021982	protein_coding	Cdadc1	ENSMUST00000225103	retained_intron		14	-1	59597946	2579
ENSMUSG00000098335	processed_pseudogene	Gm27156	ENSMUST00000184589	processed_pseudogene		9	1	76650381	754
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000213235	retained_intron		9	1	15307726	4881
ENSMUSG00000032606	protein_coding	Nicn1	ENSMUST00000195695	processed_transcript		9	1	108290455	716
ENSMUSG00000046269	protein_coding	Usp27x	ENSMUST00000178293	nonsense_mediated_decay		X	-1	7375826	4275
ENSMUSG00000021982	protein_coding	Cdadc1	ENSMUST00000224968	processed_transcript		14	-1	59597946	330
ENSMUSG00000027703	protein_coding	Lrriq4	ENSMUST00000108265	protein_coding	alternative2	3	1	30647886	2092
ENSMUSG00000032606	protein_coding	Nicn1	ENSMUST00000192035	retained_intron		9	1	108293855	525
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000216825	nonsense_mediated_decay		9	1	15307746	1210
ENSMUSG00000021982	protein_coding	Cdadc1	ENSMUST00000223842	retained_intron		14	-1	59597935	357
ENSMUSG00000078291	processed_pseudogene	Gm3940	ENSMUST00000105087	processed_pseudogene		1	-1	52091066	432
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000215749	nonsense_mediated_decay		9	1	15309900	651
ENSMUSG00000027703	protein_coding	Lrriq4	ENSMUST00000172350	protein_coding	principal3	3	1	30645330	1797
ENSMUSG00000046269	protein_coding	Usp27x	ENSMUST00000115744	protein_coding	principal1	X	-1	7375830	3240
ENSMUSG00000109599	lincRNA	Gm31812	ENSMUST00000210323	lincRNA		1	-1	52113751	1170
ENSMUSG00000021982	protein_coding	Cdadc1	ENSMUST00000022555	protein_coding	alternative2	14	-1	59597836	1500
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000214899	retained_intron		9	1	15310361	1717
ENSMUSG00000046269	protein_coding	Usp27x	ENSMUST00000191497	protein_coding	principal1	X	-1	7375826	4273
ENSMUSG00000020485	protein_coding	Supt4a	ENSMUST00000152700	nonsense_mediated_decay		11	1	87737552	854
ENSMUSG00000024074	protein_coding	Crim1	ENSMUST00000112498	protein_coding	principal1	17	1	78200248	5995
ENSMUSG00000106178	TEC	Gm42987	ENSMUST00000197115	TEC		5	1	100884133	2350
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000214316	protein_coding		9	1	15311630	353
ENSMUSG00000020485	protein_coding	Supt4a	ENSMUST00000141169	nonsense_mediated_decay		11	1	87737553	799
ENSMUSG00000085577	unprocessed_pseudogene	Mageb6-ps	ENSMUST00000126612	unprocessed_pseudogene		X	-1	86371830	1032
ENSMUSG00000086288	antisense	Gm15265	ENSMUST00000133494	antisense		3	-1	95004446	551
ENSMUSG00000087252	processed_transcript	Gm14379	ENSMUST00000128858	processed_transcript		X	1	7375925	1878
ENSMUSG00000024074	protein_coding	Crim1	ENSMUST00000234546	protein_coding		17	1	78200919	732
ENSMUSG00000087611	antisense	4930458D05Rik	ENSMUST00000142871	antisense		5	-1	100847167	3055
ENSMUSG00000026519	protein_coding	Tmem63a	ENSMUST00000027800	protein_coding	principal1	1	1	180942459	3306
ENSMUSG00000086288	antisense	Gm15265	ENSMUST00000143287	antisense		3	-1	95004869	814
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000216768	retained_intron		9	1	15312801	502
ENSMUSG00000032607	protein_coding	Amt	ENSMUST00000160025	processed_transcript		9	1	108296853	1354
ENSMUSG00000118598	unprocessed_pseudogene	AL645467.1	ENSMUST00000239280	unprocessed_pseudogene		X	-1	86388552	556
ENSMUSG00000024074	protein_coding	Crim1	ENSMUST00000234700	protein_coding		17	1	78201065	2487
ENSMUSG00000031939	protein_coding	Taf1d	ENSMUST00000214045	processed_transcript		9	1	15316206	491
ENSMUSG00000026519	protein_coding	Tmem63a	ENSMUST00000159436	protein_coding		1	1	180942574	654
ENSMUSG00000101628	processed_transcript	Gm28177	ENSMUST00000185516	processed_transcript		1	1	52077261	3532
ENSMUSG00000019338	protein_coding	Zfp687	ENSMUST00000146169	retained_intron		3	-1	95011807	4930
ENSMUSG00000024074	protein_coding	Crim1	ENSMUST00000234964	protein_coding		17	1	78237772	632
ENSMUSG00000029314	protein_coding	Gpat3	ENSMUST00000144623	protein_coding		5	1	100845713	391
ENSMUSG00000082450	unprocessed_pseudogene	Mageb7-ps	ENSMUST00000118274	unprocessed_pseudogene		X	-1	86399244	1041
ENSMUSG00000018566	protein_coding	Slc2a4	ENSMUST00000018710	protein_coding	principal1	11	-1	69948149	2524
ENSMUSG00000026519	protein_coding	Tmem63a	ENSMUST00000161523	protein_coding	principal1	1	1	180944035	3258
ENSMUSG00000024074	protein_coding	Crim1	ENSMUST00000234059	nonsense_mediated_decay		17	1	78280183	821
ENSMUSG00000117156	processed_pseudogene	Gm49904	ENSMUST00000233140	processed_pseudogene		17	-1	70926532	331
ENSMUSG00000024074	protein_coding	Crim1	ENSMUST00000234439	protein_coding		17	1	78350889	547
ENSMUSG00000018566	protein_coding	Slc2a4	ENSMUST00000141837	protein_coding		11	-1	69948164	1776
ENSMUSG00000026519	protein_coding	Tmem63a	ENSMUST00000160508	protein_coding		1	1	180945906	241
ENSMUSG00000018566	protein_coding	Slc2a4	ENSMUST00000152487	nonsense_mediated_decay		11	-1	69947974	735
ENSMUSG00000117525	antisense	Gm50034	ENSMUST00000234569	antisense		17	1	78408816	897
ENSMUSG00000026519	protein_coding	Tmem63a	ENSMUST00000160536	protein_coding		1	1	180945962	704
ENSMUSG00000026519	protein_coding	Tmem63a	ENSMUST00000161942	retained_intron		1	1	180960067	547
ENSMUSG00000018566	protein_coding	Slc2a4	ENSMUST00000178363	nonsense_mediated_decay		11	-1	69948147	679
ENSMUSG00000032607	protein_coding	Amt	ENSMUST00000035230	protein_coding	principal1	9	1	108296870	2082
ENSMUSG00000039831	protein_coding	Arhgap29	ENSMUST00000196984	protein_coding		3	1	121952541	516
ENSMUSG00000018566	protein_coding	Slc2a4	ENSMUST00000179298	protein_coding		11	-1	69948145	787
ENSMUSG00000020288	protein_coding	Ahsa2	ENSMUST00000109539	protein_coding		11	-1	23497930	3583
ENSMUSG00000085563	antisense	2210411M09Rik	ENSMUST00000128545	antisense		1	-1	180958149	643
ENSMUSG00000032607	protein_coding	Amt	ENSMUST00000162568	retained_intron		9	1	108296910	520
ENSMUSG00000018566	protein_coding	Slc2a4	ENSMUST00000142500	protein_coding		11	-1	69948188	408
ENSMUSG00000092386	processed_transcript	Gm20536	ENSMUST00000172588	processed_transcript		6	1	72609836	406
ENSMUSG00000019338	protein_coding	Zfp687	ENSMUST00000019482	protein_coding	principal1	3	-1	95015238	4632
ENSMUSG00000032607	protein_coding	Amt	ENSMUST00000160675	retained_intron		9	1	108296922	651
ENSMUSG00000018566	protein_coding	Slc2a4	ENSMUST00000135437	protein_coding		11	-1	69948154	626
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000225963	nonsense_mediated_decay		19	-1	55316010	2647
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000226103	nonsense_mediated_decay		19	-1	55315993	3357
ENSMUSG00000019338	protein_coding	Zfp687	ENSMUST00000126222	retained_intron		3	-1	95015223	5208
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000225495	protein_coding		19	-1	55315996	1711
ENSMUSG00000073737	processed_pseudogene	Gm10566	ENSMUST00000086739	processed_pseudogene		1	-1	15269797	996
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000224897	protein_coding	principal1	19	-1	55316032	2168
ENSMUSG00000019338	protein_coding	Zfp687	ENSMUST00000147022	retained_intron		3	-1	95015404	4617
ENSMUSG00000029910	protein_coding	Mad2l1	ENSMUST00000116605	protein_coding	principal1	6	1	66535390	7557
ENSMUSG00000005373	protein_coding	Mlxipl	ENSMUST00000153519	nonsense_mediated_decay		5	1	135106913	3207
ENSMUSG00000005373	protein_coding	Mlxipl	ENSMUST00000128691	nonsense_mediated_decay		5	1	135106913	3214
ENSMUSG00000020288	protein_coding	Ahsa2	ENSMUST00000020529	protein_coding	principal1	11	-1	23498030	3023
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000076891	protein_coding	principal1	19	-1	55316030	2263
ENSMUSG00000019338	protein_coding	Zfp687	ENSMUST00000137799	nonsense_mediated_decay		3	-1	95015437	4147
ENSMUSG00000029910	protein_coding	Mad2l1	ENSMUST00000125430	retained_intron		6	1	66535425	1680
ENSMUSG00000038521	protein_coding	C1s1	ENSMUST00000160505	protein_coding	principal1	6	-1	124542321	2946
ENSMUSG00000005373	protein_coding	Mlxipl	ENSMUST00000129008	nonsense_mediated_decay		5	1	135106913	3195
ENSMUSG00000020288	protein_coding	Ahsa2	ENSMUST00000128372	protein_coding		11	-1	23497538	2802
ENSMUSG00000034959	protein_coding	Rubcnl	ENSMUST00000036072	protein_coding	principal1	14	1	75016027	2651
ENSMUSG00000056429	protein_coding	Tgoln1	ENSMUST00000070524	protein_coding	principal1	6	-1	72617000	5013
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000225032	retained_intron		19	-1	55303089	547
ENSMUSG00000019338	protein_coding	Zfp687	ENSMUST00000132195	protein_coding		3	-1	95015448	862
ENSMUSG00000020288	protein_coding	Ahsa2	ENSMUST00000124801	processed_transcript		11	-1	23492306	697
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000224291	protein_coding		19	-1	55315988	2603
ENSMUSG00000019338	protein_coding	Zfp687	ENSMUST00000149747	protein_coding		3	-1	95015224	718
ENSMUSG00000020288	protein_coding	Ahsa2	ENSMUST00000122864	processed_transcript		11	-1	23491424	714
ENSMUSG00000029910	protein_coding	Mad2l1	ENSMUST00000101343	protein_coding	principal1	6	1	66535468	1725
ENSMUSG00000034959	protein_coding	Rubcnl	ENSMUST00000228689	retained_intron		14	1	75036622	3758
ENSMUSG00000038521	protein_coding	C1s1	ENSMUST00000162443	protein_coding	principal1	6	-1	124542359	2906
ENSMUSG00000019338	protein_coding	Zfp687	ENSMUST00000128438	protein_coding		3	-1	95015218	370
ENSMUSG00000020288	protein_coding	Ahsa2	ENSMUST00000153409	processed_transcript		11	-1	23491077	553
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000223807	nonsense_mediated_decay		19	-1	55316026	3457
ENSMUSG00000029910	protein_coding	Mad2l1	ENSMUST00000135411	processed_transcript		6	1	66535678	229
ENSMUSG00000020288	protein_coding	Ahsa2	ENSMUST00000147157	protein_coding		11	-1	23497905	651
ENSMUSG00000038521	protein_coding	C1s1	ENSMUST00000159143	retained_intron		6	-1	124540377	523
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000223743	retained_intron		19	-1	55304449	407
ENSMUSG00000020288	protein_coding	Ahsa2	ENSMUST00000128559	protein_coding		11	-1	23497895	638
ENSMUSG00000038521	protein_coding	C1s1	ENSMUST00000159463	protein_coding		6	-1	124542303	648
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000223625	retained_intron		19	-1	55314362	1420
ENSMUSG00000105011	TEC	Gm43210	ENSMUST00000196743	TEC		3	1	130539489	6152
ENSMUSG00000024982	protein_coding	Zdhhc6	ENSMUST00000224474	retained_intron		19	-1	55314519	646
ENSMUSG00000038521	protein_coding	C1s1	ENSMUST00000162844	protein_coding		6	-1	124542309	336
ENSMUSG00000086459	processed_transcript	1700030C12Rik	ENSMUST00000125126	processed_transcript		11	1	23497753	344
ENSMUSG00000104208	antisense	Gm37401	ENSMUST00000192053	antisense		9	-1	108338273	347
ENSMUSG00000086459	processed_transcript	1700030C12Rik	ENSMUST00000144783	processed_transcript		11	1	23497757	555
ENSMUSG00000102554	processed_pseudogene	Gm37568	ENSMUST00000191755	processed_pseudogene		9	1	108331246	364
ENSMUSG00000058897	protein_coding	Col25a1	ENSMUST00000197950	processed_transcript		3	1	130131501	1078
ENSMUSG00000086459	processed_transcript	1700030C12Rik	ENSMUST00000133489	processed_transcript		11	1	23498851	606
ENSMUSG00000028583	protein_coding	Pdpn	ENSMUST00000030317	protein_coding	principal3	4	-1	143299564	1817
ENSMUSG00000058897	protein_coding	Col25a1	ENSMUST00000143830	retained_intron		3	1	130180891	3514
ENSMUSG00000086459	processed_transcript	1700030C12Rik	ENSMUST00000101462	processed_transcript		11	1	23497783	858
ENSMUSG00000028583	protein_coding	Pdpn	ENSMUST00000119654	protein_coding	alternative2	4	-1	143299463	762
ENSMUSG00000021997	protein_coding	Lrrc63	ENSMUST00000022574	protein_coding	principal1	14	-1	75130881	2517
ENSMUSG00000009646	protein_coding	Pla2g12b	ENSMUST00000009790	protein_coding	principal1	10	1	59403660	1091
ENSMUSG00000009646	protein_coding	Pla2g12b	ENSMUST00000162643	protein_coding		10	1	59411027	804
ENSMUSG00000029314	protein_coding	Gpat3	ENSMUST00000112887	protein_coding	principal1	5	1	100846130	3059
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000147495	protein_coding	alternative2	9	-1	44728100	5424
ENSMUSG00000029314	protein_coding	Gpat3	ENSMUST00000031255	protein_coding	principal1	5	1	100846219	2884
ENSMUSG00000005373	protein_coding	Mlxipl	ENSMUST00000005507	protein_coding	principal1	5	1	135106918	3622
ENSMUSG00000029314	protein_coding	Gpat3	ENSMUST00000092990	protein_coding	principal1	5	1	100846364	3035
ENSMUSG00000005373	protein_coding	Mlxipl	ENSMUST00000154840	protein_coding		5	1	135133610	542
ENSMUSG00000023243	protein_coding	Kcnk5	ENSMUST00000024011	protein_coding	principal1	14	-1	20181809	3392
ENSMUSG00000005373	protein_coding	Mlxipl	ENSMUST00000123370	protein_coding		5	1	135133631	789
ENSMUSG00000026413	protein_coding	Pkp1	ENSMUST00000027667	protein_coding	principal1	1	-1	135919207	4669
ENSMUSG00000029314	protein_coding	Gpat3	ENSMUST00000145612	protein_coding		5	1	100846417	337
ENSMUSG00000007815	protein_coding	Rhoa	ENSMUST00000007959	protein_coding	principal1	9	1	108306129	2197
ENSMUSG00000026413	protein_coding	Pkp1	ENSMUST00000163260	protein_coding	principal1	1	-1	135919120	3023
ENSMUSG00000023243	protein_coding	Kcnk5	ENSMUST00000225552	processed_transcript		14	-1	20145294	654
ENSMUSG00000086537	antisense	Gnasas1	ENSMUST00000151472	antisense		2	-1	174295436	2248
ENSMUSG00000109656	TEC	Gm45548	ENSMUST00000210076	TEC		7	-1	101354439	3167
ENSMUSG00000108615	processed_pseudogene	Gm4973	ENSMUST00000206925	processed_pseudogene		7	1	125547269	1334
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000144251	protein_coding		9	-1	44713240	3589
ENSMUSG00000007815	protein_coding	Rhoa	ENSMUST00000193619	retained_intron		9	1	108306439	5101
ENSMUSG00000086537	antisense	Gnasas1	ENSMUST00000150276	antisense		2	-1	174295389	1262
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000156918	protein_coding		9	-1	44713265	3485
ENSMUSG00000086537	antisense	Gnasas1	ENSMUST00000143738	antisense		2	-1	174285435	1083
ENSMUSG00000026413	protein_coding	Pkp1	ENSMUST00000189805	nonsense_mediated_decay		1	-1	135919142	2395
ENSMUSG00000007815	protein_coding	Rhoa	ENSMUST00000194701	protein_coding		9	1	108306797	852
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000128326	protein_coding		9	-1	44715623	3747
ENSMUSG00000026413	protein_coding	Pkp1	ENSMUST00000132793	retained_intron		1	-1	135878275	696
ENSMUSG00000108185	processed_pseudogene	Gm19653	ENSMUST00000204326	processed_pseudogene		6	1	97449750	1039
ENSMUSG00000102414	TEC	Gm36938	ENSMUST00000191612	TEC		1	-1	135899089	2696
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000138356	protein_coding	alternative2	9	-1	44728079	5600
ENSMUSG00000030653	protein_coding	Gm45837	ENSMUST00000084894	protein_coding	principal1	7	1	101410886	4139
ENSMUSG00000007815	protein_coding	Rhoa	ENSMUST00000193490	protein_coding		9	1	108306829	394
ENSMUSG00000064128	protein_coding	Cenpj	ENSMUST00000065302	protein_coding	principal1	14	-1	56571846	4363
ENSMUSG00000084372	processed_pseudogene	Gm13988	ENSMUST00000119363	processed_pseudogene		2	1	123273924	288
ENSMUSG00000025892	protein_coding	Gria4	ENSMUST00000063508	protein_coding	principal3	9	-1	4796142	5352
ENSMUSG00000007815	protein_coding	Rhoa	ENSMUST00000193424	retained_intron		9	1	108330560	667
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000034611	protein_coding	principal2	9	-1	44735198	5461
ENSMUSG00000064128	protein_coding	Cenpj	ENSMUST00000225951	protein_coding	principal1	14	-1	56575382	4756
ENSMUSG00000053870	protein_coding	Fpgt	ENSMUST00000066568	protein_coding	principal1	3	-1	155093403	3518
ENSMUSG00000070577	protein_coding	Gm572	ENSMUST00000105698	protein_coding	principal1	4	1	148643317	1385
ENSMUSG00000025892	protein_coding	Gria4	ENSMUST00000212533	protein_coding	alternative1	9	-1	4795519	5207
ENSMUSG00000064128	protein_coding	Cenpj	ENSMUST00000226026	retained_intron		14	-1	56530157	423
ENSMUSG00000063018	processed_transcript	2010204K13Rik	ENSMUST00000154346	processed_transcript		X	-1	7421085	874
ENSMUSG00000063018	processed_transcript	2010204K13Rik	ENSMUST00000147870	processed_transcript		X	-1	7412825	587
ENSMUSG00000039461	protein_coding	Tcta	ENSMUST00000044725	protein_coding		9	-1	108305990	1668
ENSMUSG00000064128	protein_coding	Cenpj	ENSMUST00000229861	protein_coding		14	-1	56552485	1315
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000135436	protein_coding		9	-1	44701733	2844
ENSMUSG00000087273	lincRNA	Gm13203	ENSMUST00000139895	lincRNA		4	1	148713703	520
ENSMUSG00000053870	protein_coding	Fpgt	ENSMUST00000194095	processed_transcript		3	-1	155093197	875
ENSMUSG00000063018	processed_transcript	2010204K13Rik	ENSMUST00000128571	processed_transcript		X	-1	7422988	540
ENSMUSG00000064128	protein_coding	Cenpj	ENSMUST00000224748	processed_transcript		14	-1	56575425	528
ENSMUSG00000053870	protein_coding	Fpgt	ENSMUST00000193071	retained_intron		3	-1	155090519	1492
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000148344	protein_coding		9	-1	44716380	4643
ENSMUSG00000063018	processed_transcript	2010204K13Rik	ENSMUST00000150671	processed_transcript		X	-1	7445143	885
ENSMUSG00000053870	protein_coding	Fpgt	ENSMUST00000192959	retained_intron		3	-1	155093368	686
ENSMUSG00000039461	protein_coding	Tcta	ENSMUST00000192886	protein_coding	principal1	9	-1	108306160	1094
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000134465	protein_coding	alternative2	9	-1	44728100	5244
ENSMUSG00000053870	protein_coding	Fpgt	ENSMUST00000192247	processed_transcript		3	-1	155092555	858
ENSMUSG00000083535	processed_pseudogene	Gm14381	ENSMUST00000122105	processed_pseudogene		X	-1	7514201	414
ENSMUSG00000025892	protein_coding	Gria4	ENSMUST00000163309	protein_coding		9	-1	4796234	2338
ENSMUSG00000039461	protein_coding	Tcta	ENSMUST00000195615	protein_coding		9	-1	108305948	597
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000129806	retained_intron		9	-1	44697845	612
ENSMUSG00000053870	protein_coding	Fpgt	ENSMUST00000195505	processed_transcript		3	-1	155093227	442
ENSMUSG00000025892	protein_coding	Gria4	ENSMUST00000027020	protein_coding	alternative1	9	-1	4796234	5441
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000133312	retained_intron		9	-1	44696431	422
ENSMUSG00000084150	processed_pseudogene	Gm14395	ENSMUST00000120494	processed_pseudogene		X	-1	7536133	563
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000123310	protein_coding		9	-1	44704108	786
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000114410	protein_coding	principal1	1	-1	57970128	2512
ENSMUSG00000034486	protein_coding	Gbx2	ENSMUST00000036954	protein_coding	principal1	1	-1	89931179	2135
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000154723	protein_coding		9	-1	44710946	928
ENSMUSG00000083402	processed_pseudogene	Gm14394	ENSMUST00000120307	processed_pseudogene		X	-1	7547314	295
ENSMUSG00000034486	protein_coding	Gbx2	ENSMUST00000187633	retained_intron		1	-1	89929185	1220
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000123123	nonsense_mediated_decay		9	-1	44708427	732
ENSMUSG00000092627	processed_transcript	D130058E05Rik	ENSMUST00000173856	antisense		1	1	89930234	1372
ENSMUSG00000085382	lincRNA	Gm13861	ENSMUST00000137136	lincRNA		6	-1	34653894	495
ENSMUSG00000075394	protein_coding	Hoxc4	ENSMUST00000165375	protein_coding		15	1	103018934	2121
ENSMUSG00000092627	processed_transcript	D130058E05Rik	ENSMUST00000189763	retained_intron		1	1	89930261	3030
ENSMUSG00000115360	TEC	Gm48932	ENSMUST00000226322	TEC		15	-1	34826429	3250
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000161608	nonsense_mediated_decay		1	-1	57969524	2495
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000123406	protein_coding		9	-1	44721424	823
ENSMUSG00000075394	protein_coding	Hoxc4	ENSMUST00000100164	protein_coding	principal1	15	1	103034395	1983
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000163061	nonsense_mediated_decay		1	-1	58018956	5016
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000148929	protein_coding		9	-1	44721387	632
ENSMUSG00000108934	antisense	Gm44732	ENSMUST00000208055	antisense		7	1	143459749	635
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000159826	protein_coding		1	-1	57970048	599
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000126818	retained_intron		9	-1	44727350	539
ENSMUSG00000102297	TEC	5730585A16Rik	ENSMUST00000193457	TEC		15	-1	103059306	1027
ENSMUSG00000048537	protein_coding	Phldb1	ENSMUST00000123003	processed_transcript		9	-1	44726486	382
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000160614	retained_intron		1	-1	57963447	707
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000163006	retained_intron		1	-1	57962102	406
ENSMUSG00000111280	TEC	Gm47239	ENSMUST00000214717	TEC		9	1	44713010	704
ENSMUSG00000101356	lincRNA	Gm28876	ENSMUST00000188137	lincRNA		15	-1	103102111	703
ENSMUSG00000028020	protein_coding	Glrb	ENSMUST00000135043	nonsense_mediated_decay		3	-1	80913614	2979
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000068000	retained_intron		1	-1	57970052	2607
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000189298	retained_intron		1	-1	57962981	1824
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000162410	retained_intron		1	-1	57970079	2261
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000160130	retained_intron		1	-1	57970079	4181
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000219557	protein_coding		10	1	98914406	1249
ENSMUSG00000054770	protein_coding	Kctd18	ENSMUST00000164963	protein_coding		1	-1	57970084	2114
ENSMUSG00000026039	protein_coding	Sgo2a	ENSMUST00000027202	protein_coding	principal1	1	1	57995971	4939
ENSMUSG00000038861	protein_coding	Pi4kb	ENSMUST00000072287	protein_coding	principal3	3	1	94974731	3692
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000109095	protein_coding		2	1	174284320	2059
ENSMUSG00000026039	protein_coding	Sgo2a	ENSMUST00000190746	retained_intron		1	1	58022716	3183
ENSMUSG00000000305	protein_coding	Cdh4	ENSMUST00000000314	protein_coding	principal1	2	1	179442431	6388
ENSMUSG00000028156	protein_coding	Eif4e	ENSMUST00000029803	protein_coding	principal1	3	1	138526179	4991
ENSMUSG00000038861	protein_coding	Pi4kb	ENSMUST00000167008	protein_coding		3	1	94974831	1962
ENSMUSG00000028156	protein_coding	Eif4e	ENSMUST00000200020	protein_coding		3	1	138526425	1421
ENSMUSG00000000305	protein_coding	Cdh4	ENSMUST00000108911	protein_coding		2	1	179442622	1208
ENSMUSG00000058897	protein_coding	Col25a1	ENSMUST00000080335	protein_coding	principal4	3	1	130180891	2624
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000188931	protein_coding	alternative1	1	1	75236406	3066
ENSMUSG00000038861	protein_coding	Pi4kb	ENSMUST00000107251	protein_coding	alternative1	3	1	94974876	2895
ENSMUSG00000075279	processed_pseudogene	Mrpl23-ps1	ENSMUST00000173086	processed_pseudogene		2	-1	74591909	580
ENSMUSG00000028156	protein_coding	Eif4e	ENSMUST00000196990	protein_coding		3	1	138527285	856
ENSMUSG00000000305	protein_coding	Cdh4	ENSMUST00000124708	processed_transcript		2	1	179444233	427
ENSMUSG00000038861	protein_coding	Pi4kb	ENSMUST00000125476	protein_coding		3	1	94976117	3400
ENSMUSG00000082973	processed_pseudogene	Gm13672	ENSMUST00000117554	processed_pseudogene		2	1	74631840	459
ENSMUSG00000000305	protein_coding	Cdh4	ENSMUST00000136411	processed_transcript		2	1	179777163	379
ENSMUSG00000028156	protein_coding	Eif4e	ENSMUST00000200239	protein_coding		3	1	138527285	526
ENSMUSG00000058897	protein_coding	Col25a1	ENSMUST00000183368	nonsense_mediated_decay		3	1	130180891	3778
ENSMUSG00000000305	protein_coding	Cdh4	ENSMUST00000129659	retained_intron		2	1	179893884	747
ENSMUSG00000038861	protein_coding	Pi4kb	ENSMUST00000138209	protein_coding		3	1	94976144	619
ENSMUSG00000028156	protein_coding	Eif4e	ENSMUST00000200100	protein_coding		3	1	138527296	729
ENSMUSG00000000305	protein_coding	Cdh4	ENSMUST00000098996	protein_coding		2	1	179893909	69
ENSMUSG00000083410	processed_pseudogene	Gm14300	ENSMUST00000120800	processed_pseudogene		2	-1	179613567	946
ENSMUSG00000058897	protein_coding	Col25a1	ENSMUST00000106353	protein_coding	alternative2	3	1	130180891	6701
ENSMUSG00000028156	protein_coding	Eif4e	ENSMUST00000198252	retained_intron		3	1	138550855	292
ENSMUSG00000038861	protein_coding	Pi4kb	ENSMUST00000133297	protein_coding		3	1	94998929	923
ENSMUSG00000038861	protein_coding	Pi4kb	ENSMUST00000133166	processed_transcript		3	1	95004314	548
ENSMUSG00000058897	protein_coding	Col25a1	ENSMUST00000238846	protein_coding	alternative2	3	1	130181484	2097
ENSMUSG00000084846	antisense	A730011C13Rik	ENSMUST00000141787	antisense		3	-1	94996996	1877
ENSMUSG00000058897	protein_coding	Col25a1	ENSMUST00000198205	retained_intron		3	1	130478816	2723
ENSMUSG00000084846	antisense	A730011C13Rik	ENSMUST00000135483	antisense		3	-1	94997350	1601
ENSMUSG00000105760	TEC	Gm43211	ENSMUST00000196901	TEC		3	1	130561942	1899
ENSMUSG00000031284	protein_coding	Pak3	ENSMUST00000112863	protein_coding	alternative1	X	1	143665745	8657
ENSMUSG00000106276	processed_pseudogene	Gm9397	ENSMUST00000200125	processed_pseudogene		3	1	130140380	605
ENSMUSG00000031284	protein_coding	Pak3	ENSMUST00000112864	protein_coding	principal3	X	1	143665745	8612
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000188346	protein_coding	principal3	1	1	75236469	1823
ENSMUSG00000105520	TEC	Gm42837	ENSMUST00000197071	TEC		3	1	130592121	2829
ENSMUSG00000040138	protein_coding	Ndp	ENSMUST00000040134	protein_coding	principal1	X	-1	16911774	1939
ENSMUSG00000028020	protein_coding	Glrb	ENSMUST00000029654	protein_coding	principal1	3	-1	80913660	3029
ENSMUSG00000037664	protein_coding	Cdkn1c	ENSMUST00000167912	protein_coding	alternative2	7	-1	143460996	1888
ENSMUSG00000032338	protein_coding	Hcn4	ENSMUST00000034889	protein_coding	principal1	9	1	58823412	6118
ENSMUSG00000028020	protein_coding	Glrb	ENSMUST00000194085	protein_coding		3	-1	80912089	1341
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000188290	protein_coding	principal3	1	1	75236487	1855
ENSMUSG00000028020	protein_coding	Glrb	ENSMUST00000107743	protein_coding		3	-1	80913528	1101
ENSMUSG00000031284	protein_coding	Pak3	ENSMUST00000126592	protein_coding		X	1	143664373	451
ENSMUSG00000028020	protein_coding	Glrb	ENSMUST00000193031	retained_intron		3	-1	80857255	1620
ENSMUSG00000111151	processed_pseudogene	Gm5120	ENSMUST00000215231	processed_pseudogene		9	-1	26962559	2414
ENSMUSG00000031284	protein_coding	Pak3	ENSMUST00000112865	protein_coding	principal3	X	1	143664579	8484
ENSMUSG00000028020	protein_coding	Glrb	ENSMUST00000132330	nonsense_mediated_decay		3	-1	80913589	563
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000185403	nonsense_mediated_decay		1	1	75236513	1366
ENSMUSG00000031284	protein_coding	Pak3	ENSMUST00000112868	protein_coding	principal3	X	1	143664290	8163
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000187058	protein_coding		1	1	75236556	1732
ENSMUSG00000108893	TEC	Gm44927	ENSMUST00000207573	TEC		7	1	87890749	716
ENSMUSG00000031284	protein_coding	Pak3	ENSMUST00000156449	protein_coding		X	1	143664391	716
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000185654	protein_coding		1	1	75236614	499
ENSMUSG00000108890	TEC	Gm44847	ENSMUST00000207104	TEC		7	1	88082813	1991
ENSMUSG00000031284	protein_coding	Pak3	ENSMUST00000155215	protein_coding		X	1	143664526	701
ENSMUSG00000109461	TEC	Gm44848	ENSMUST00000207808	TEC		7	1	88063061	3234
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000186600	retained_intron		1	1	75236772	404
ENSMUSG00000031284	protein_coding	Pak3	ENSMUST00000134402	protein_coding		X	1	143518698	1351
ENSMUSG00000108993	TEC	Gm44846	ENSMUST00000207127	TEC		7	1	88119158	3243
ENSMUSG00000031284	protein_coding	Pak3	ENSMUST00000033640	protein_coding	alternative1	X	1	143518591	8348
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000188628	retained_intron		1	1	75237075	340
ENSMUSG00000037664	protein_coding	Cdkn1c	ENSMUST00000037287	protein_coding	principal3	7	-1	143461050	1901
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000190379	retained_intron		1	1	75238924	737
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000190445	nonsense_mediated_decay		1	1	75241409	565
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000120879	protein_coding	principal2	7	1	102210362	2141
ENSMUSG00000037664	protein_coding	Cdkn1c	ENSMUST00000208118	retained_intron		7	-1	143459311	500
ENSMUSG00000037664	protein_coding	Cdkn1c	ENSMUST00000207910	protein_coding		7	-1	143460173	646
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000055223	protein_coding		1	1	75236465	1199
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000146996	protein_coding		7	1	102210372	527
ENSMUSG00000026203	protein_coding	Dnajb2	ENSMUST00000082158	protein_coding	principal3	1	1	75236465	1253
ENSMUSG00000037664	protein_coding	Cdkn1c	ENSMUST00000208137	protein_coding		7	-1	143460162	667
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000146394	processed_transcript		7	1	102210524	232
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000020107	protein_coding	principal1	10	1	98915152	7130
ENSMUSG00000031284	protein_coding	Pak3	ENSMUST00000172330	protein_coding	principal3	X	1	143693286	8135
ENSMUSG00000108983	TEC	Gm44926	ENSMUST00000207898	TEC		7	1	87772567	1826
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000219624	protein_coding		10	1	98915472	1588
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000127804	retained_intron		7	1	102210535	712
ENSMUSG00000085704	processed_transcript	4921531C22Rik	ENSMUST00000153188	processed_transcript		2	1	179975993	601
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000218695	retained_intron		10	1	98986131	2334
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000143541	protein_coding		7	1	102222440	427
ENSMUSG00000104399	sense_intronic	Gm37963	ENSMUST00000195351	sense_intronic		9	1	108389082	613
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000220358	retained_intron		10	1	98990880	3688
ENSMUSG00000085704	processed_transcript	4921531C22Rik	ENSMUST00000150145	processed_transcript		2	1	179976853	1905
ENSMUSG00000049583	protein_coding	Grm5	ENSMUST00000208791	retained_intron		7	1	87584168	2742
ENSMUSG00000047003	protein_coding	Zfp41	ENSMUST00000161785	protein_coding	principal1	15	1	75616679	3540
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000219090	protein_coding		10	1	99001442	2393
ENSMUSG00000049583	protein_coding	Grm5	ENSMUST00000208878	processed_transcript		7	1	87584375	609
ENSMUSG00000108841	protein_coding	Frmpd2	ENSMUST00000208853	nonsense_mediated_decay		14	1	33471696	664
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000218312	retained_intron		10	1	99014893	604
ENSMUSG00000044349	protein_coding	Snhg11	ENSMUST00000239262	lincRNA		2	1	158375638	5864
ENSMUSG00000032611	protein_coding	1700102P08Rik	ENSMUST00000192995	protein_coding		9	1	108392805	658
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000220124	protein_coding		10	1	99014943	1460
ENSMUSG00000031516	protein_coding	Dctn6	ENSMUST00000033913	protein_coding	principal1	8	-1	34108796	1249
ENSMUSG00000027533	protein_coding	Fabp5	ENSMUST00000029046	protein_coding	principal1	3	1	10012548	987
ENSMUSG00000044349	protein_coding	Snhg11	ENSMUST00000148965	retained_intron		2	1	158375661	687
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000218948	protein_coding		10	1	99014969	1224
ENSMUSG00000026354	protein_coding	Lct	ENSMUST00000073490	protein_coding	principal1	1	-1	128328318	6174
ENSMUSG00000027533	protein_coding	Fabp5	ENSMUST00000123744	retained_intron		3	1	10012605	3238
ENSMUSG00000032611	protein_coding	1700102P08Rik	ENSMUST00000035234	protein_coding	principal1	9	1	108392834	1101
ENSMUSG00000053588	bidirectional_promoter_lncRNA	A730061H03Rik	ENSMUST00000238215	bidirectional_promoter_lncRNA		14	-1	55560408	1312
ENSMUSG00000026354	protein_coding	Lct	ENSMUST00000162067	retained_intron		1	-1	128292264	620
ENSMUSG00000047003	protein_coding	Zfp41	ENSMUST00000054555	protein_coding	principal1	15	1	75616684	8270
ENSMUSG00000108841	protein_coding	Frmpd2	ENSMUST00000208577	protein_coding	principal1	14	1	33471808	5192
ENSMUSG00000053588	bidirectional_promoter_lncRNA	A730061H03Rik	ENSMUST00000066106	bidirectional_promoter_lncRNA		14	-1	55560406	465
ENSMUSG00000044349	protein_coding	Snhg11	ENSMUST00000149303	lincRNA		2	1	158375698	1329
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000220104	protein_coding		10	1	99015046	1404
ENSMUSG00000044349	protein_coding	Snhg11	ENSMUST00000239310	lincRNA		2	1	158375713	1646
ENSMUSG00000108841	protein_coding	Frmpd2	ENSMUST00000207581	processed_transcript		14	1	33550042	875
ENSMUSG00000047003	protein_coding	Zfp41	ENSMUST00000161752	protein_coding		15	1	75616726	807
ENSMUSG00000022215	protein_coding	Fitm1	ENSMUST00000022826	protein_coding	principal1	14	1	55575617	971
ENSMUSG00000019943	protein_coding	Atp2b1	ENSMUST00000218419	retained_intron		10	1	99019037	454
ENSMUSG00000108841	protein_coding	Frmpd2	ENSMUST00000208380	processed_transcript		14	1	33565298	2616
ENSMUSG00000063856	protein_coding	Gpx1	ENSMUST00000192401	retained_intron		9	1	108338903	900
ENSMUSG00000047003	protein_coding	Zfp41	ENSMUST00000161555	processed_transcript		15	1	75621711	600
ENSMUSG00000044349	protein_coding	Snhg11	ENSMUST00000137320	retained_intron		2	1	158375715	3156
ENSMUSG00000044349	protein_coding	Snhg11	ENSMUST00000138307	lincRNA		2	1	158375725	786
ENSMUSG00000086341	antisense	Gm15932	ENSMUST00000135068	antisense		14	-1	55575991	535
ENSMUSG00000063856	protein_coding	Gpx1	ENSMUST00000082429	protein_coding	principal1	9	1	108339054	1072
ENSMUSG00000114523	processed_pseudogene	Gm48394	ENSMUST00000225224	processed_pseudogene		14	-1	20199954	253
ENSMUSG00000044349	protein_coding	Snhg11	ENSMUST00000239345	lincRNA		2	1	158375762	963
ENSMUSG00000031516	protein_coding	Dctn6	ENSMUST00000153537	retained_intron		8	-1	34108477	501
ENSMUSG00000031516	protein_coding	Dctn6	ENSMUST00000143411	protein_coding		8	-1	34108463	331
ENSMUSG00000063856	protein_coding	Gpx1	ENSMUST00000191997	protein_coding		9	1	108339243	787
ENSMUSG00000114439	lincRNA	Gm48395	ENSMUST00000223732	lincRNA		14	1	20215502	486
ENSMUSG00000053289	protein_coding	Ddx10	ENSMUST00000065630	protein_coding	principal1	9	-1	53248053	3128
ENSMUSG00000044349	protein_coding	Snhg11	ENSMUST00000109488	protein_coding	principal1	2	1	158375638	5864
ENSMUSG00000063856	protein_coding	Gpx1	ENSMUST00000193987	protein_coding		9	1	108339276	653
ENSMUSG00000056666	protein_coding	Retsat	ENSMUST00000070597	protein_coding	principal1	6	1	72598475	3027
ENSMUSG00000031516	protein_coding	Dctn6	ENSMUST00000117243	protein_coding		8	-1	34108536	962
ENSMUSG00000111693	processed_pseudogene	Gm47986	ENSMUST00000213563	processed_pseudogene		9	1	53164188	492
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000088546	protein_coding		X	1	68678541	4409
ENSMUSG00000031516	protein_coding	Dctn6	ENSMUST00000118811	protein_coding		8	-1	34107852	934
ENSMUSG00000056666	protein_coding	Retsat	ENSMUST00000176364	protein_coding		6	1	72598628	1647
ENSMUSG00000056666	protein_coding	Retsat	ENSMUST00000176168	protein_coding		6	1	72598628	1203
ENSMUSG00000114410	unprocessed_pseudogene	Gm2048	ENSMUST00000224421	unprocessed_pseudogene		14	-1	20260932	690
ENSMUSG00000071757	protein_coding	Zhx2	ENSMUST00000096430	protein_coding	principal1	15	1	57694665	4376
ENSMUSG00000056666	protein_coding	Retsat	ENSMUST00000175824	processed_transcript		6	1	72604373	596
ENSMUSG00000071757	protein_coding	Zhx2	ENSMUST00000160990	processed_transcript		15	1	57695729	211
ENSMUSG00000056666	protein_coding	Retsat	ENSMUST00000205878	protein_coding		6	1	72605972	617
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000153020	protein_coding		7	1	102222644	841
ENSMUSG00000056666	protein_coding	Retsat	ENSMUST00000129071	protein_coding		6	1	72606645	433
ENSMUSG00000047220	protein_coding	Ccdc36	ENSMUST00000076592	protein_coding	principal1	9	-1	108428484	2890
ENSMUSG00000047807	antisense	9330154K18Rik	ENSMUST00000176703	antisense		15	-1	57738666	2104
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000156529	protein_coding	principal2	7	1	102223028	2034
ENSMUSG00000108368	TEC	Gm45053	ENSMUST00000206112	TEC		6	-1	72605502	2499
ENSMUSG00000028584	protein_coding	Lrrc38	ENSMUST00000052458	protein_coding	principal1	4	1	143349757	2324
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000138479	protein_coding		7	1	102223045	746
ENSMUSG00000049583	protein_coding	Grm5	ENSMUST00000125009	protein_coding	principal3	7	1	87584393	8047
ENSMUSG00000090002	antisense	Gm16006	ENSMUST00000160938	antisense		15	-1	57708927	566
ENSMUSG00000017943	protein_coding	Gdap1l1	ENSMUST00000109421	protein_coding		2	1	163438478	1206
ENSMUSG00000039117	protein_coding	Taf4	ENSMUST00000041618	protein_coding	principal2	2	-1	179976646	4416
ENSMUSG00000031516	protein_coding	Dctn6	ENSMUST00000131839	processed_transcript		8	-1	34107814	1050
ENSMUSG00000039117	protein_coding	Taf4	ENSMUST00000227325	protein_coding	alternative2	2	-1	179976646	4380
ENSMUSG00000110644	processed_pseudogene	Gm7390	ENSMUST00000212452	processed_pseudogene		9	1	4977959	1216
ENSMUSG00000031516	protein_coding	Dctn6	ENSMUST00000155296	retained_intron		8	-1	34095038	769
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000127954	retained_intron		X	1	68678582	1333
ENSMUSG00000049583	protein_coding	Grm5	ENSMUST00000208776	processed_transcript		7	1	87584398	551
ENSMUSG00000031516	protein_coding	Dctn6	ENSMUST00000152422	protein_coding		8	-1	34106374	776
ENSMUSG00000105092	lincRNA	Gm42468	ENSMUST00000200360	lincRNA		3	1	80962960	703
ENSMUSG00000039117	protein_coding	Taf4	ENSMUST00000155335	processed_transcript		2	-1	179922208	251
ENSMUSG00000032402	protein_coding	Smad3	ENSMUST00000034973	protein_coding	principal1	9	-1	63757994	5090
ENSMUSG00000031516	protein_coding	Dctn6	ENSMUST00000123113	retained_intron		8	-1	34092925	651
ENSMUSG00000039117	protein_coding	Taf4	ENSMUST00000154961	processed_transcript		2	-1	179929355	676
ENSMUSG00000031516	protein_coding	Dctn6	ENSMUST00000142661	retained_intron		8	-1	34097691	783
ENSMUSG00000103419	unprocessed_pseudogene	Gm29808	ENSMUST00000194419	unprocessed_pseudogene		3	1	81000994	468
ENSMUSG00000032402	protein_coding	Smad3	ENSMUST00000154323	protein_coding		9	-1	63711969	744
ENSMUSG00000049583	protein_coding	Grm5	ENSMUST00000155358	protein_coding	alternative2	7	1	87602441	4500
ENSMUSG00000023387	protein_coding	Kcnk16	ENSMUST00000225596	protein_coding		14	-1	20267416	2127
ENSMUSG00000106293	lincRNA	Gm42476	ENSMUST00000198860	lincRNA		3	1	81032954	554
ENSMUSG00000032402	protein_coding	Smad3	ENSMUST00000137065	processed_transcript		9	-1	63743265	406
ENSMUSG00000032402	protein_coding	Smad3	ENSMUST00000133108	protein_coding		9	-1	63751077	429
ENSMUSG00000017943	protein_coding	Gdap1l1	ENSMUST00000018087	protein_coding	principal1	2	1	163438478	2220
ENSMUSG00000017943	protein_coding	Gdap1l1	ENSMUST00000137070	protein_coding		2	1	163438533	813
ENSMUSG00000032402	protein_coding	Smad3	ENSMUST00000137713	protein_coding		9	-1	63666547	466
ENSMUSG00000023387	protein_coding	Kcnk16	ENSMUST00000024155	protein_coding	principal1	14	-1	20269199	916
ENSMUSG00000062905	protein_coding	Vmn1r32	ENSMUST00000079584	protein_coding	principal1	6	-1	66560096	2833
ENSMUSG00000049583	protein_coding	Grm5	ENSMUST00000138732	processed_transcript		7	1	87603089	683
ENSMUSG00000028495	protein_coding	Rps6	ENSMUST00000102814	protein_coding	principal1	4	-1	86857412	878
ENSMUSG00000062905	protein_coding	Vmn1r32	ENSMUST00000227014	protein_coding	principal1	6	-1	66560096	2661
ENSMUSG00000017943	protein_coding	Gdap1l1	ENSMUST00000109420	protein_coding	principal1	2	1	163438476	2475
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000129340	nonsense_mediated_decay		7	1	102223050	869
ENSMUSG00000049583	protein_coding	Grm5	ENSMUST00000107263	protein_coding	principal3	7	1	87602544	3516
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000126914	protein_coding		7	1	102223053	672
ENSMUSG00000039831	protein_coding	Arhgap29	ENSMUST00000037958	protein_coding	principal1	3	1	121953229	5787
ENSMUSG00000028495	protein_coding	Rps6	ENSMUST00000136174	processed_transcript		4	-1	86857345	1128
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000142584	retained_intron		X	1	68694798	1950
ENSMUSG00000081792	processed_pseudogene	Anp32b-ps1	ENSMUST00000122215	processed_pseudogene		4	1	143389659	758
ENSMUSG00000084910	processed_transcript	C630043F03Rik	ENSMUST00000122923	processed_transcript		4	1	72201348	2581
ENSMUSG00000066983	processed_pseudogene	Gm16519	ENSMUST00000092011	processed_pseudogene		17	1	70929058	489
ENSMUSG00000039831	protein_coding	Arhgap29	ENSMUST00000196904	protein_coding		3	1	121953230	412
ENSMUSG00000117200	processed_pseudogene	Gm49905	ENSMUST00000233596	processed_pseudogene		17	1	70957124	797
ENSMUSG00000107710	processed_pseudogene	Gm5307	ENSMUST00000204772	processed_pseudogene		6	1	66577210	760
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000146177	retained_intron		X	1	68678582	2870
ENSMUSG00000028495	protein_coding	Rps6	ENSMUST00000123229	processed_transcript		4	-1	86857354	639
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000114656	protein_coding		X	1	68678624	4257
ENSMUSG00000028495	protein_coding	Rps6	ENSMUST00000130001	processed_transcript		4	-1	86857332	639
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000033292	protein_coding	alternative1	7	1	102223069	1201
ENSMUSG00000039831	protein_coding	Arhgap29	ENSMUST00000196479	protein_coding		3	1	121967829	934
ENSMUSG00000001815	protein_coding	Evx2	ENSMUST00000001867	protein_coding	alternative2	2	-1	74659557	4191
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000114657	protein_coding		X	1	68678811	4076
ENSMUSG00000083372	processed_pseudogene	Gm11235	ENSMUST00000117763	processed_pseudogene		4	1	72542666	333
ENSMUSG00000117079	lincRNA	Gm41611	ENSMUST00000233521	lincRNA		17	1	70967886	2943
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000126861	processed_transcript		11	-1	116147139	3391
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000124619	retained_intron		7	1	102223071	1033
ENSMUSG00000039831	protein_coding	Arhgap29	ENSMUST00000197155	protein_coding		3	1	121967829	2503
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000114653	protein_coding		X	1	68678817	4058
ENSMUSG00000111668	processed_pseudogene	Gm47213	ENSMUST00000215015	processed_pseudogene		9	-1	47948161	282
ENSMUSG00000001815	protein_coding	Evx2	ENSMUST00000173623	protein_coding	principal2	2	-1	74659419	1428
ENSMUSG00000111294	TEC	Gm47215	ENSMUST00000215753	TEC		9	1	47964476	2837
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000114654	protein_coding	alternative1	X	1	68678802	4061
ENSMUSG00000059375	protein_coding	Vmn1r33	ENSMUST00000227418	protein_coding	principal1	6	-1	66618282	2414
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000133311	processed_transcript		7	1	102223072	669
ENSMUSG00000059375	protein_coding	Vmn1r33	ENSMUST00000079678	protein_coding	principal1	6	-1	66612617	1036
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000146559	protein_coding		7	1	102223075	394
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000114655	protein_coding	principal5	X	1	68678802	4199
ENSMUSG00000111437	processed_pseudogene	Gm47236	ENSMUST00000214513	processed_pseudogene		9	-1	48000798	446
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000143759	retained_intron		7	1	102223078	685
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000148348	retained_intron		X	1	68678582	2193
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000133327	processed_transcript		X	1	68678582	720
ENSMUSG00000033128	protein_coding	Gga1	ENSMUST00000041587	protein_coding	principal1	15	1	78877190	3034
ENSMUSG00000059343	protein_coding	Aldoart1	ENSMUST00000179234	protein_coding	principal1	4	-1	72852632	2050
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000141728	retained_intron		X	1	68697662	588
ENSMUSG00000059343	protein_coding	Aldoart1	ENSMUST00000078617	protein_coding		4	-1	72852634	2052
ENSMUSG00000000838	protein_coding	Fmr1	ENSMUST00000127993	retained_intron		X	1	68711851	646
ENSMUSG00000084173	processed_pseudogene	Gm5287	ENSMUST00000120666	processed_pseudogene		4	1	72893781	598
ENSMUSG00000022814	protein_coding	Umps	ENSMUST00000023510	protein_coding	principal1	16	-1	33967038	3484
ENSMUSG00000091509	processed_transcript	Gm17066	ENSMUST00000165350	processed_transcript		14	-1	105114676	1113
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000145352	nonsense_mediated_decay		7	1	102223084	1254
ENSMUSG00000016200	protein_coding	Syt14	ENSMUST00000215093	protein_coding		1	-1	193035775	9274
ENSMUSG00000091509	processed_transcript	Gm17066	ENSMUST00000164319	processed_transcript		14	-1	105114461	795
ENSMUSG00000039831	protein_coding	Arhgap29	ENSMUST00000199081	retained_intron		3	1	121981550	1165
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000119816	nonsense_mediated_decay		7	1	102223085	1253
ENSMUSG00000022814	protein_coding	Umps	ENSMUST00000131990	nonsense_mediated_decay		16	-1	33967003	3283
ENSMUSG00000039831	protein_coding	Arhgap29	ENSMUST00000198594	retained_intron		3	1	121988869	2374
ENSMUSG00000039831	protein_coding	Arhgap29	ENSMUST00000198914	protein_coding		3	1	121993632	3758
ENSMUSG00000086083	antisense	Gm15829	ENSMUST00000145415	antisense		16	1	33966239	869
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000150891	processed_transcript		7	1	102223093	1699
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000138753	protein_coding		7	1	102223282	589
ENSMUSG00000053062	protein_coding	Jam2	ENSMUST00000114195	protein_coding	principal2	16	1	84774123	4370
ENSMUSG00000039831	protein_coding	Arhgap29	ENSMUST00000199550	retained_intron		3	1	122002989	609
ENSMUSG00000053062	protein_coding	Jam2	ENSMUST00000098407	protein_coding		16	1	84774386	1998
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000142873	protein_coding		7	1	102225818	460
ENSMUSG00000053062	protein_coding	Jam2	ENSMUST00000231910	protein_coding	alternative2	16	1	84793558	1214
ENSMUSG00000033128	protein_coding	Gga1	ENSMUST00000230192	nonsense_mediated_decay		15	1	78877551	2665
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000140058	nonsense_mediated_decay		7	1	102225831	561
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000136318	processed_transcript		11	-1	116167780	5223
ENSMUSG00000053062	protein_coding	Jam2	ENSMUST00000138054	processed_transcript		16	1	84809407	659
ENSMUSG00000033128	protein_coding	Gga1	ENSMUST00000230243	processed_transcript		15	1	78883002	393
ENSMUSG00000041805	protein_coding	Pramel1	ENSMUST00000037419	protein_coding	principal1	4	1	143394428	2794
ENSMUSG00000033128	protein_coding	Gga1	ENSMUST00000230772	retained_intron		15	1	78883786	860
ENSMUSG00000033128	protein_coding	Gga1	ENSMUST00000229353	retained_intron		15	1	78892207	842
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000120119	protein_coding		7	1	102229999	1979
ENSMUSG00000030990	protein_coding	Pgap2	ENSMUST00000134621	retained_intron		7	1	102235903	902
ENSMUSG00000082407	unprocessed_pseudogene	Gm13045	ENSMUST00000119019	unprocessed_pseudogene		4	1	143402344	712
ENSMUSG00000083416	processed_pseudogene	Gm15378	ENSMUST00000121894	processed_pseudogene		X	1	75143424	207
ENSMUSG00000115578	processed_pseudogene	Gm46506	ENSMUST00000227140	processed_pseudogene		15	1	27636511	385
ENSMUSG00000111557	unprocessed_pseudogene	Gm18164	ENSMUST00000213769	unprocessed_pseudogene		2	-1	89219725	927
ENSMUSG00000080254	processed_pseudogene	Fam220-ps	ENSMUST00000116535	processed_pseudogene		X	1	75143688	783
ENSMUSG00000111095	unprocessed_pseudogene	Gm18165	ENSMUST00000217426	unprocessed_pseudogene		2	-1	89227731	928
ENSMUSG00000086189	antisense	Gm15462	ENSMUST00000133653	antisense		3	1	30686085	4580
ENSMUSG00000073094	protein_coding	Smim9	ENSMUST00000101433	protein_coding	principal1	X	-1	75163753	706
ENSMUSG00000016200	protein_coding	Syt14	ENSMUST00000195354	protein_coding	principal3	1	-1	193035775	7882
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000143539	protein_coding		14	1	75131101	356
ENSMUSG00000073094	protein_coding	Smim9	ENSMUST00000141041	processed_transcript		X	-1	75163770	613
ENSMUSG00000016200	protein_coding	Syt14	ENSMUST00000195530	nonsense_mediated_decay		1	-1	193035662	2078
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000124608	processed_transcript		14	1	75131159	3459
ENSMUSG00000073094	protein_coding	Smim9	ENSMUST00000165080	protein_coding	principal1	X	-1	75161620	414
ENSMUSG00000016200	protein_coding	Syt14	ENSMUST00000016344	protein_coding	alternative1	1	-1	193035717	1904
ENSMUSG00000082244	processed_pseudogene	Gm8503	ENSMUST00000118131	processed_pseudogene		X	1	75155819	455
ENSMUSG00000074653	protein_coding	Lrrc31	ENSMUST00000126658	protein_coding		3	-1	30699830	1586
ENSMUSG00000016200	protein_coding	Syt14	ENSMUST00000191907	retained_intron		1	-1	193035644	3393
ENSMUSG00000083168	processed_pseudogene	Gm14201	ENSMUST00000117627	processed_pseudogene		2	-1	158403015	289
ENSMUSG00000074653	protein_coding	Lrrc31	ENSMUST00000108263	protein_coding	principal1	3	-1	30699843	3284
ENSMUSG00000083715	processed_pseudogene	Gm14202	ENSMUST00000120121	processed_pseudogene		2	-1	158406818	311
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000103099	protein_coding	principal3	11	1	101552149	4789
ENSMUSG00000074653	protein_coding	Lrrc31	ENSMUST00000194840	retained_intron		3	-1	30699768	1822
ENSMUSG00000074653	protein_coding	Lrrc31	ENSMUST00000130731	processed_transcript		3	-1	30699810	705
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000147239	protein_coding		11	1	101552234	563
ENSMUSG00000026355	protein_coding	Mcm6	ENSMUST00000027601	protein_coding	principal1	1	-1	128359664	2910
ENSMUSG00000030748	protein_coding	Il4ra	ENSMUST00000033004	protein_coding	principal1	7	1	125552120	5256
ENSMUSG00000034918	protein_coding	Cdhr2	ENSMUST00000037145	protein_coding	principal1	13	1	54701461	4129
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000103098	protein_coding	principal3	11	1	101552654	4654
ENSMUSG00000026355	protein_coding	Mcm6	ENSMUST00000190495	protein_coding		1	-1	128359647	4355
ENSMUSG00000030748	protein_coding	Il4ra	ENSMUST00000206217	protein_coding		7	1	125552271	434
ENSMUSG00000002372	protein_coding	Ranbp3	ENSMUST00000232975	processed_transcript		17	1	56673294	658
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000107213	protein_coding	alternative2	11	1	101552858	4339
ENSMUSG00000026355	protein_coding	Mcm6	ENSMUST00000191454	retained_intron		1	-1	128346042	588
ENSMUSG00000030748	protein_coding	Il4ra	ENSMUST00000206681	retained_intron		7	1	125552271	1615
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000123558	nonsense_mediated_decay		11	1	101552858	4392
ENSMUSG00000026355	protein_coding	Mcm6	ENSMUST00000188755	retained_intron		1	-1	128343463	471
ENSMUSG00000030748	protein_coding	Il4ra	ENSMUST00000205985	protein_coding		7	1	125552276	491
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000034226	protein_coding	principal1	8	-1	94601997	2873
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000107208	protein_coding		11	1	101552858	4344
ENSMUSG00000069227	protein_coding	Gprin1	ENSMUST00000135343	protein_coding	principal1	13	-1	54749874	4248
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000149170	processed_transcript		11	1	101552867	342
ENSMUSG00000103930	unprocessed_pseudogene	Gm36961	ENSMUST00000191980	unprocessed_pseudogene		1	-1	180976289	132
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212262	processed_transcript		8	-1	94601677	447
ENSMUSG00000030748	protein_coding	Il4ra	ENSMUST00000206846	nonsense_mediated_decay		7	1	125552287	3696
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000107212	protein_coding	alternative2	11	1	101552882	4168
ENSMUSG00000089874	antisense	9230117E06Rik	ENSMUST00000159309	antisense		16	1	22511480	497
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212485	retained_intron		8	-1	94579845	640
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000127421	protein_coding		11	1	101552901	265
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212696	processed_transcript		8	-1	94601701	409
ENSMUSG00000089663	antisense	Gm15651	ENSMUST00000159953	antisense		16	1	22548553	2507
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000136185	nonsense_mediated_decay		11	1	101555866	276
ENSMUSG00000116738	TEC	Gm49565	ENSMUST00000232369	TEC		16	1	22540473	3414
ENSMUSG00000108524	antisense	Gm44876	ENSMUST00000205394	antisense		7	-1	125572117	670
ENSMUSG00000031143	protein_coding	Ccdc22	ENSMUST00000033483	protein_coding	principal1	X	-1	7605517	2353
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000211833	nonsense_mediated_decay		8	-1	94582996	393
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000146452	retained_intron		11	1	101561786	810
ENSMUSG00000116847	processed_pseudogene	Gm30251	ENSMUST00000232238	processed_pseudogene		16	1	22528218	567
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000127871	retained_intron		11	1	101566033	594
ENSMUSG00000069227	protein_coding	Gprin1	ENSMUST00000099506	protein_coding	principal1	13	-1	54749669	4141
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000149019	protein_coding		11	1	101567119	3330
ENSMUSG00000031143	protein_coding	Ccdc22	ENSMUST00000144674	retained_intron		X	-1	7597279	2293
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212791	protein_coding		8	-1	94601713	828
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000174013	retained_intron		11	1	101568294	463
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000144517	processed_transcript		11	1	101568687	364
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212507	protein_coding		8	-1	94601862	897
ENSMUSG00000038776	protein_coding	Ephx1	ENSMUST00000154133	protein_coding		1	-1	180996170	742
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000172744	retained_intron		11	1	101572227	804
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000213022	protein_coding		8	-1	94601690	685
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000148805	retained_intron		11	1	101575107	639
ENSMUSG00000039545	antisense	Flicr	ENSMUST00000144719	antisense		X	1	7573600	3467
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000141170	retained_intron		11	1	101577824	418
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212083	protein_coding		8	-1	94601551	646
ENSMUSG00000039545	antisense	Flicr	ENSMUST00000149124	antisense		X	1	7574492	661
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000213008	protein_coding		8	-1	94601678	803
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212159	protein_coding		8	-1	94601679	757
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000107218	protein_coding	principal3	11	1	101556058	3353
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212258	protein_coding		8	-1	94601698	696
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000184092	misc_RNA		11	1	101559519	63
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000186574	protein_coding		1	1	52119440	2834
ENSMUSG00000117098	protein_coding	Gm49909	ENSMUST00000233357	protein_coding	principal1	17	-1	71002205	837
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212765	protein_coding		8	-1	94601644	585
ENSMUSG00000117098	protein_coding	Gm49909	ENSMUST00000233417	protein_coding		17	-1	71002208	636
ENSMUSG00000039521	protein_coding	Foxp3	ENSMUST00000234896	protein_coding		X	1	7573644	662
ENSMUSG00000042010	protein_coding	Acacb	ENSMUST00000102582	protein_coding	principal1	5	1	114146535	8788
ENSMUSG00000046862	protein_coding	Pramef8	ENSMUST00000059790	protein_coding	principal1	4	1	143412426	3886
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212788	protein_coding		8	-1	94601701	424
ENSMUSG00000017119	protein_coding	Nbr1	ENSMUST00000071537	protein_coding	alternative2	11	1	101556172	3239
ENSMUSG00000042010	protein_coding	Acacb	ENSMUST00000146841	protein_coding		5	1	114175906	676
ENSMUSG00000046862	protein_coding	Pramef8	ENSMUST00000132915	protein_coding		4	1	143412972	343
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000143571	protein_coding		11	1	97799000	429
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212547	protein_coding		8	-1	94601726	504
ENSMUSG00000046862	protein_coding	Pramef8	ENSMUST00000037356	protein_coding	principal1	4	1	143412987	3260
ENSMUSG00000031774	protein_coding	Fam192a	ENSMUST00000212429	processed_transcript		8	-1	94601692	366
ENSMUSG00000038776	protein_coding	Ephx1	ENSMUST00000036928	protein_coding	principal1	1	-1	181017569	1741
ENSMUSG00000046862	protein_coding	Pramef8	ENSMUST00000155157	protein_coding		4	1	143413009	778
ENSMUSG00000038776	protein_coding	Ephx1	ENSMUST00000111068	protein_coding		1	-1	181017569	1699
ENSMUSG00000032612	protein_coding	Usp4	ENSMUST00000035237	protein_coding	principal3	9	1	108347853	3662
ENSMUSG00000046862	protein_coding	Pramef8	ENSMUST00000126398	processed_transcript		4	1	143413010	352
ENSMUSG00000038776	protein_coding	Ephx1	ENSMUST00000147585	protein_coding		1	-1	181020904	534
ENSMUSG00000042010	protein_coding	Acacb	ENSMUST00000143276	retained_intron		5	1	114199779	6680
ENSMUSG00000032612	protein_coding	Usp4	ENSMUST00000194224	nonsense_mediated_decay		9	1	108347874	3457
ENSMUSG00000112660	TEC	Gm48761	ENSMUST00000219298	TEC		10	1	99039472	1972
ENSMUSG00000042010	protein_coding	Acacb	ENSMUST00000142489	retained_intron		5	1	114248333	506
ENSMUSG00000038007	protein_coding	Acer2	ENSMUST00000045224	protein_coding	principal1	4	1	86874396	4216
ENSMUSG00000032612	protein_coding	Usp4	ENSMUST00000193093	retained_intron		9	1	108347897	1665
ENSMUSG00000042010	protein_coding	Acacb	ENSMUST00000031583	protein_coding	principal1	5	1	114165518	8482
ENSMUSG00000032612	protein_coding	Usp4	ENSMUST00000194959	protein_coding	alternative1	9	1	108347913	3436
ENSMUSG00000038007	protein_coding	Acer2	ENSMUST00000084433	protein_coding		4	1	86874414	4060
ENSMUSG00000034868	protein_coding	Myl12b	ENSMUST00000038446	protein_coding	principal1	17	-1	70990890	2143
ENSMUSG00000032612	protein_coding	Usp4	ENSMUST00000192750	processed_transcript		9	1	108356454	562
ENSMUSG00000084243	processed_pseudogene	Gm13784	ENSMUST00000119639	processed_pseudogene		5	-1	114237925	519
ENSMUSG00000034868	protein_coding	Myl12b	ENSMUST00000233004	protein_coding	principal1	17	-1	70978532	1001
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000117236	protein_coding	principal2	14	1	55560006	2538
ENSMUSG00000032612	protein_coding	Usp4	ENSMUST00000194034	retained_intron		9	1	108359844	550
ENSMUSG00000051306	protein_coding	Usp42	ENSMUST00000053287	protein_coding	principal1	5	-1	143732280	5151
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000103031	protein_coding	principal1	11	-1	116168153	5252
ENSMUSG00000038007	protein_coding	Acer2	ENSMUST00000128712	processed_transcript		4	1	86874414	1176
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000070968	protein_coding	principal1	1	1	52119455	5151
ENSMUSG00000032612	protein_coding	Usp4	ENSMUST00000194065	retained_intron		9	1	108367924	2319
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000147981	protein_coding		14	1	55560018	310
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000134114	protein_coding		14	1	75131159	628
ENSMUSG00000051306	protein_coding	Usp42	ENSMUST00000141225	processed_transcript		5	-1	143715613	654
ENSMUSG00000022119	protein_coding	Rbm26	ENSMUST00000172122	protein_coding		14	-1	105130337	3664
ENSMUSG00000034868	protein_coding	Myl12b	ENSMUST00000137537	retained_intron		17	-1	70975966	734
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000125833	protein_coding		14	1	75131499	667
ENSMUSG00000032612	protein_coding	Usp4	ENSMUST00000193288	protein_coding		9	1	108372693	1804
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000151245	processed_transcript		14	1	55560021	417
ENSMUSG00000051306	protein_coding	Usp42	ENSMUST00000141396	retained_intron		5	-1	143717187	2554
ENSMUSG00000034868	protein_coding	Myl12b	ENSMUST00000131820	retained_intron		17	-1	70990530	369
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000125980	processed_transcript		11	-1	116150795	1992
ENSMUSG00000032612	protein_coding	Usp4	ENSMUST00000195608	protein_coding		9	1	108381371	725
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000150703	processed_transcript		11	-1	116157490	684
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000191435	protein_coding		1	1	52119490	2803
ENSMUSG00000051306	protein_coding	Usp42	ENSMUST00000155408	retained_intron		5	-1	143728017	2359
ENSMUSG00000038007	protein_coding	Acer2	ENSMUST00000135874	processed_transcript		4	1	86930691	2943
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000143038	processed_transcript		11	-1	116158893	598
ENSMUSG00000051306	protein_coding	Usp42	ENSMUST00000129606	retained_intron		5	-1	143722945	710
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000133256	protein_coding		14	1	55560025	694
ENSMUSG00000001819	protein_coding	Hoxd13	ENSMUST00000001872	protein_coding	principal1	2	1	74668310	2483
ENSMUSG00000032612	protein_coding	Usp4	ENSMUST00000194939	retained_intron		9	1	108390876	760
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000186857	protein_coding	principal1	1	1	52119492	4241
ENSMUSG00000002372	protein_coding	Ranbp3	ENSMUST00000002445	protein_coding	principal2	17	1	56673358	2373
ENSMUSG00000104280	processed_pseudogene	Rps2-ps11	ENSMUST00000195283	processed_pseudogene		9	-1	108359069	868
ENSMUSG00000002372	protein_coding	Ranbp3	ENSMUST00000233319	protein_coding	alternative2	17	1	56673365	2567
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000188681	protein_coding		1	1	52119498	715
ENSMUSG00000047534	protein_coding	Mis18bp1	ENSMUST00000052201	protein_coding	principal1	12	-1	65172580	4017
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000124828	protein_coding		11	-1	116168154	1410
ENSMUSG00000002372	protein_coding	Ranbp3	ENSMUST00000233617	retained_intron		17	1	56673367	5114
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000189347	protein_coding		1	1	52119549	2588
ENSMUSG00000101588	lincRNA	Gm28265	ENSMUST00000188201	lincRNA		15	-1	103104602	2319
ENSMUSG00000099758	lincRNA	Gm10830	ENSMUST00000186379	lincRNA		15	1	103102237	636
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000131521	processed_transcript		11	-1	116165883	732
ENSMUSG00000002372	protein_coding	Ranbp3	ENSMUST00000233305	retained_intron		17	1	56673376	588
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000186186	retained_intron		1	1	52119559	548
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000148350	processed_transcript		11	-1	116168166	674
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000185743	retained_intron		1	1	52119572	1344
ENSMUSG00000116066	lincRNA	Gm49477	ENSMUST00000230071	lincRNA		15	1	103135881	841
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000139020	protein_coding		11	-1	116168148	775
ENSMUSG00000002372	protein_coding	Ranbp3	ENSMUST00000233029	retained_intron		17	1	56673381	1908
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000186057	protein_coding		1	1	52119624	3998
ENSMUSG00000047534	protein_coding	Mis18bp1	ENSMUST00000140391	retained_intron		12	-1	65172604	5016
ENSMUSG00000002372	protein_coding	Ranbp3	ENSMUST00000233727	retained_intron		17	1	56673384	731
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000136073	retained_intron		11	-1	116167765	763
ENSMUSG00000097003	lincRNA	D930007P13Rik	ENSMUST00000181306	lincRNA		15	-1	103146828	1324
ENSMUSG00000047534	protein_coding	Mis18bp1	ENSMUST00000141456	retained_intron		12	-1	65138718	601
ENSMUSG00000002372	protein_coding	Ranbp3	ENSMUST00000232922	retained_intron		17	1	56696735	542
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000189075	retained_intron		1	1	52150104	827
ENSMUSG00000047534	protein_coding	Mis18bp1	ENSMUST00000222244	protein_coding		12	-1	65172598	2053
ENSMUSG00000028019	protein_coding	Pdgfc	ENSMUST00000029652	protein_coding	principal1	3	1	81036416	3521
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000189244	protein_coding		1	1	52150258	3298
ENSMUSG00000020776	protein_coding	Fbf1	ENSMUST00000106435	protein_coding	principal1	11	-1	116165914	4651
ENSMUSG00000047534	protein_coding	Mis18bp1	ENSMUST00000221296	protein_coding		12	-1	65172599	969
ENSMUSG00000026104	protein_coding	Stat1	ENSMUST00000189336	nonsense_mediated_decay		1	1	52152253	886
ENSMUSG00000047534	protein_coding	Mis18bp1	ENSMUST00000149986	retained_intron		12	-1	65155094	517
ENSMUSG00000047534	protein_coding	Mis18bp1	ENSMUST00000124201	protein_coding		12	-1	65172566	717
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000113355	protein_coding	principal3	6	-1	97617541	4913
ENSMUSG00000047534	protein_coding	Mis18bp1	ENSMUST00000131753	retained_intron		12	-1	65172578	2972
ENSMUSG00000028019	protein_coding	Pdgfc	ENSMUST00000129285	nonsense_mediated_decay		3	1	81037172	2818
ENSMUSG00000028019	protein_coding	Pdgfc	ENSMUST00000143721	nonsense_mediated_decay		3	1	81037424	2502
ENSMUSG00000085106	antisense	Gm16000	ENSMUST00000146657	antisense		3	-1	81040437	447
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000203486	retained_intron		6	-1	97291261	4230
ENSMUSG00000084162	processed_pseudogene	Gm11251	ENSMUST00000119593	processed_pseudogene		4	1	73029819	2800
ENSMUSG00000013973	protein_coding	Dedd	ENSMUST00000111300	protein_coding	principal1	1	1	171329145	2563
ENSMUSG00000013973	protein_coding	Dedd	ENSMUST00000111299	protein_coding	principal1	1	1	171329399	2322
ENSMUSG00000036061	protein_coding	Smug1	ENSMUST00000229377	protein_coding	principal1	15	-1	103161977	3601
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000150019	nonsense_mediated_decay		14	1	55560062	2593
ENSMUSG00000055108	protein_coding	Phxr2	ENSMUST00000060761	protein_coding	principal1	10	-1	99126325	1159
ENSMUSG00000036061	protein_coding	Smug1	ENSMUST00000229371	protein_coding	principal1	15	-1	103167092	3882
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000129310	retained_intron		14	1	55560121	7271
ENSMUSG00000089994	antisense	Gm16239	ENSMUST00000160182	antisense		10	-1	99184610	2635
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000127991	processed_transcript		14	1	55560482	362
ENSMUSG00000036061	protein_coding	Smug1	ENSMUST00000229429	retained_intron		15	-1	103163327	3752
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000143698	processed_transcript		6	-1	97312380	3996
ENSMUSG00000013973	protein_coding	Dedd	ENSMUST00000064950	protein_coding	principal1	1	1	171329408	1618
ENSMUSG00000002379	protein_coding	Ndufa11	ENSMUST00000002452	protein_coding	principal1	17	1	56717767	545
ENSMUSG00000036061	protein_coding	Smug1	ENSMUST00000231198	protein_coding		15	-1	103163318	491
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000113359	protein_coding	alternative1	6	-1	97459286	4311
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000121622	protein_coding	principal2	14	1	55560512	2379
ENSMUSG00000090035	protein_coding	Galnt4	ENSMUST00000161240	protein_coding	principal1	10	1	99108159	5089
ENSMUSG00000036061	protein_coding	Smug1	ENSMUST00000230529	processed_transcript		15	-1	103165516	751
ENSMUSG00000013973	protein_coding	Dedd	ENSMUST00000142063	protein_coding		1	1	171329569	757
ENSMUSG00000091012	protein_coding	Vmn1r34	ENSMUST00000226910	protein_coding	principal1	6	-1	66642399	2982
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000143431	protein_coding		14	1	55560518	344
ENSMUSG00000002379	protein_coding	Ndufa11	ENSMUST00000233832	protein_coding		17	1	56717783	493
ENSMUSG00000013973	protein_coding	Dedd	ENSMUST00000129116	protein_coding		1	1	171329610	849
ENSMUSG00000021612	protein_coding	Slc6a18	ENSMUST00000109679	protein_coding	alternative2	13	-1	73678023	4149
ENSMUSG00000091012	protein_coding	Vmn1r34	ENSMUST00000228498	protein_coding	principal1	6	-1	66642399	3078
ENSMUSG00000036061	protein_coding	Smug1	ENSMUST00000064067	protein_coding	principal1	15	-1	103158002	3281
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000032146	protein_coding	alternative1	6	-1	97487805	3159
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000150481	protein_coding		14	1	55560533	757
ENSMUSG00000013973	protein_coding	Dedd	ENSMUST00000135150	protein_coding		1	1	171330086	225
ENSMUSG00000091012	protein_coding	Vmn1r34	ENSMUST00000228647	protein_coding	principal1	6	-1	66643826	2979
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000152681	nonsense_mediated_decay		14	1	55560534	2624
ENSMUSG00000024048	protein_coding	Myl12a	ENSMUST00000148960	protein_coding	principal1	17	-1	71002554	1937
ENSMUSG00000091012	protein_coding	Vmn1r34	ENSMUST00000227332	protein_coding	principal1	6	-1	66643826	3075
ENSMUSG00000013973	protein_coding	Dedd	ENSMUST00000157015	protein_coding		1	1	171330355	374
ENSMUSG00000024048	protein_coding	Myl12a	ENSMUST00000233089	protein_coding	principal1	17	-1	70997307	947
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000146191	retained_intron		6	-1	97312430	2863
ENSMUSG00000091012	protein_coding	Vmn1r34	ENSMUST00000226262	protein_coding	principal1	6	-1	66643879	2952
ENSMUSG00000002379	protein_coding	Ndufa11	ENSMUST00000233457	processed_transcript		17	1	56717787	376
ENSMUSG00000024048	protein_coding	Myl12a	ENSMUST00000232766	protein_coding	principal1	17	-1	70998054	883
ENSMUSG00000002379	protein_coding	Ndufa11	ENSMUST00000233233	protein_coding		17	1	56717798	918
ENSMUSG00000091012	protein_coding	Vmn1r34	ENSMUST00000226999	protein_coding	principal1	6	-1	66643879	3048
ENSMUSG00000022037	protein_coding	Clu	ENSMUST00000022616	protein_coding	principal1	14	1	65968483	1810
ENSMUSG00000013973	protein_coding	Dedd	ENSMUST00000097467	protein_coding	principal1	1	1	171331426	1606
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000072530	protein_coding	principal2	14	1	55560929	2601
ENSMUSG00000024048	protein_coding	Myl12a	ENSMUST00000233798	protein_coding	principal1	17	-1	70998563	906
ENSMUSG00000013973	protein_coding	Dedd	ENSMUST00000131653	retained_intron		1	1	171336791	3160
ENSMUSG00000025888	protein_coding	Casp1	ENSMUST00000027015	protein_coding	principal1	9	1	5298508	1531
ENSMUSG00000091012	protein_coding	Vmn1r34	ENSMUST00000074381	protein_coding	principal1	6	-1	66637752	930
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000155326	processed_transcript		6	-1	97324140	405
ENSMUSG00000022037	protein_coding	Clu	ENSMUST00000138665	nonsense_mediated_decay		14	1	65968642	558
ENSMUSG00000013973	protein_coding	Dedd	ENSMUST00000127830	protein_coding		1	1	171337967	815
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000128490	protein_coding	principal2	14	1	55560971	2660
ENSMUSG00000054723	protein_coding	Vmac	ENSMUST00000067931	protein_coding	principal3	17	-1	56716977	2226
ENSMUSG00000024048	protein_coding	Myl12a	ENSMUST00000024846	protein_coding	principal1	17	-1	70998012	980
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000153638	retained_intron		14	1	55560984	4413
ENSMUSG00000022037	protein_coding	Clu	ENSMUST00000146990	retained_intron		14	1	65968654	841
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000117701	protein_coding	alternative2	14	1	55561067	2311
ENSMUSG00000024048	protein_coding	Myl12a	ENSMUST00000126529	retained_intron		17	-1	71002165	1335
ENSMUSG00000025888	protein_coding	Casp1	ENSMUST00000238348	retained_intron		9	1	5298686	2216
ENSMUSG00000022037	protein_coding	Clu	ENSMUST00000153460	protein_coding		14	1	65969718	1004
ENSMUSG00000024048	protein_coding	Myl12a	ENSMUST00000123686	protein_coding	principal1	17	-1	71002878	804
ENSMUSG00000025038	protein_coding	Efhc2	ENSMUST00000026014	protein_coding	principal1	X	-1	17319368	2554
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000143375	nonsense_mediated_decay		14	1	55561067	2366
ENSMUSG00000025888	protein_coding	Casp1	ENSMUST00000238546	retained_intron		9	1	5298687	2221
ENSMUSG00000022037	protein_coding	Clu	ENSMUST00000127387	protein_coding		14	1	65970620	811
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000155029	retained_intron		14	1	55564391	237
ENSMUSG00000025888	protein_coding	Casp1	ENSMUST00000238505	protein_coding		9	1	5298701	702
ENSMUSG00000024048	protein_coding	Myl12a	ENSMUST00000150456	protein_coding		17	-1	71002187	663
ENSMUSG00000022861	protein_coding	Dgkg	ENSMUST00000089925	protein_coding	principal3	16	-1	22657173	3555
ENSMUSG00000022214	protein_coding	Dcaf11	ENSMUST00000145983	processed_transcript		14	1	55565862	601
ENSMUSG00000081858	processed_pseudogene	Gm14514	ENSMUST00000121680	processed_pseudogene		X	1	17252062	940
ENSMUSG00000022037	protein_coding	Clu	ENSMUST00000138191	protein_coding		14	1	65970804	844
ENSMUSG00000054723	protein_coding	Vmac	ENSMUST00000164907	protein_coding	alternative2	17	-1	56717680	1965
ENSMUSG00000025888	protein_coding	Casp1	ENSMUST00000238730	nonsense_mediated_decay		9	1	5303038	641
ENSMUSG00000024048	protein_coding	Myl12a	ENSMUST00000129093	retained_intron		17	-1	71002160	564
ENSMUSG00000022861	protein_coding	Dgkg	ENSMUST00000023578	protein_coding	alternative2	16	-1	22657221	2725
ENSMUSG00000022037	protein_coding	Clu	ENSMUST00000128539	protein_coding		14	1	65971058	756
ENSMUSG00000024048	protein_coding	Myl12a	ENSMUST00000128179	protein_coding		17	-1	71002017	448
ENSMUSG00000054723	protein_coding	Vmac	ENSMUST00000233400	protein_coding		17	-1	56718022	345
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000166972	protein_coding	principal4	7	-1	44929496	3449
ENSMUSG00000054723	protein_coding	Vmac	ENSMUST00000233208	protein_coding		17	-1	56717685	371
ENSMUSG00000022861	protein_coding	Dgkg	ENSMUST00000137311	nonsense_mediated_decay		16	-1	22657188	2651
ENSMUSG00000022037	protein_coding	Clu	ENSMUST00000144619	protein_coding		14	1	65971303	632
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000138301	retained_intron		6	-1	97354177	611
ENSMUSG00000104869	TEC	Gm42544	ENSMUST00000197868	TEC		3	1	122023830	3242
ENSMUSG00000022037	protein_coding	Clu	ENSMUST00000152903	retained_intron		14	1	65974669	739
ENSMUSG00000022861	protein_coding	Dgkg	ENSMUST00000150553	processed_transcript		16	-1	22657028	2177
ENSMUSG00000022861	protein_coding	Dgkg	ENSMUST00000231249	retained_intron		16	-1	22657189	3916
ENSMUSG00000116580	processed_pseudogene	Gm9525	ENSMUST00000231607	processed_pseudogene		16	-1	22535297	270
ENSMUSG00000062939	protein_coding	Stat4	ENSMUST00000168302	protein_coding	principal1	1	1	51987148	2662
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000107857	protein_coding	alternative2	7	-1	44929426	3301
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000152385	processed_transcript		6	-1	97396736	768
ENSMUSG00000111578	unprocessed_pseudogene	Gm18166	ENSMUST00000215557	unprocessed_pseudogene		2	-1	89235746	927
ENSMUSG00000062939	protein_coding	Stat4	ENSMUST00000027277	protein_coding	principal1	1	1	52008243	2982
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000209067	retained_intron		7	-1	44901694	693
ENSMUSG00000111460	unprocessed_pseudogene	Olfr1227-ps1	ENSMUST00000215627	unprocessed_pseudogene		2	-1	89243773	928
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000038116	protein_coding	principal1	17	-1	66077073	10821
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000208472	protein_coding		7	-1	44903884	950
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000043843	protein_coding	principal1	11	1	97799565	3540
ENSMUSG00000022428	protein_coding	Cby1	ENSMUST00000023064	protein_coding	principal1	15	1	79659199	1147
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000139901	nonsense_mediated_decay		17	-1	65972392	623
ENSMUSG00000062939	protein_coding	Stat4	ENSMUST00000187053	retained_intron		1	1	52008626	1024
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000113353	processed_transcript		6	-1	97487803	1419
ENSMUSG00000022428	protein_coding	Cby1	ENSMUST00000230376	retained_intron		15	1	79661369	387
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000233978	protein_coding		17	-1	65976115	474
ENSMUSG00000083678	processed_pseudogene	Gm12989	ENSMUST00000122331	processed_pseudogene		4	-1	135716598	731
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000207814	nonsense_mediated_decay		7	-1	44909828	809
ENSMUSG00000062939	protein_coding	Stat4	ENSMUST00000187554	retained_intron		1	1	52105449	607
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000107569	retained_intron		11	1	97799672	686
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000142589	retained_intron		6	-1	97617529	3130
ENSMUSG00000099569	unprocessed_pseudogene	Gm18301	ENSMUST00000185261	unprocessed_pseudogene		1	-1	52135330	888
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000146090	retained_intron		17	-1	65982954	535
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000126899	retained_intron		6	-1	97396704	768
ENSMUSG00000081943	processed_pseudogene	Gm9078	ENSMUST00000119126	processed_pseudogene		X	1	101062260	617
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000207554	retained_intron		7	-1	44929462	597
ENSMUSG00000030064	protein_coding	Frmd4b	ENSMUST00000124050	protein_coding		6	-1	97431429	341
ENSMUSG00000034544	protein_coding	Rsrc1	ENSMUST00000162036	protein_coding	principal2	3	1	66981390	1406
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000208405	nonsense_mediated_decay		7	-1	44929466	542
ENSMUSG00000099486	protein_coding	Olfr1228	ENSMUST00000216392	protein_coding	alternative2	2	-1	89253730	2145
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000208813	processed_transcript		7	-1	44928643	342
ENSMUSG00000099486	protein_coding	Olfr1228	ENSMUST00000215447	protein_coding	alternative2	2	-1	89254062	3223
ENSMUSG00000032048	lincRNA	4930510E17Rik	ENSMUST00000034550	lincRNA		9	1	53264615	1639
ENSMUSG00000034544	protein_coding	Rsrc1	ENSMUST00000162362	protein_coding		3	1	66985670	470
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000208285	retained_intron		7	-1	44916734	389
ENSMUSG00000021612	protein_coding	Slc6a18	ENSMUST00000109680	protein_coding		13	-1	73678020	4052
ENSMUSG00000108093	TEC	Gm44102	ENSMUST00000204031	TEC		6	-1	97581092	1666
ENSMUSG00000099486	protein_coding	Olfr1228	ENSMUST00000190757	protein_coding	principal2	2	-1	89249775	1094
ENSMUSG00000027293	protein_coding	Ehd4	ENSMUST00000028755	protein_coding	principal1	2	-1	120154606	3730
ENSMUSG00000019715	protein_coding	Gle1	ENSMUST00000019859	protein_coding	principal1	2	1	29935426	4030
ENSMUSG00000106353	processed_pseudogene	Gm43726	ENSMUST00000199110	processed_pseudogene		3	-1	138580561	775
ENSMUSG00000024049	protein_coding	Myom1	ENSMUST00000233893	protein_coding		17	1	71002633	2212
ENSMUSG00000013997	protein_coding	Nit1	ENSMUST00000111289	protein_coding	principal1	1	-1	171345646	3041
ENSMUSG00000034544	protein_coding	Rsrc1	ENSMUST00000065074	protein_coding	principal2	3	1	66985672	3224
ENSMUSG00000021612	protein_coding	Slc6a18	ENSMUST00000022105	protein_coding		13	-1	73678019	2839
ENSMUSG00000024049	protein_coding	Myom1	ENSMUST00000233418	processed_transcript		17	1	71003419	368
ENSMUSG00000027293	protein_coding	Ehd4	ENSMUST00000150240	processed_transcript		2	-1	120129725	393
ENSMUSG00000103640	lincRNA	Gm31406	ENSMUST00000192297	lincRNA		1	-1	193042405	671
ENSMUSG00000027293	protein_coding	Ehd4	ENSMUST00000152366	processed_transcript		2	-1	120137560	455
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000233407	nonsense_mediated_decay		17	-1	66077070	1794
ENSMUSG00000034544	protein_coding	Rsrc1	ENSMUST00000162620	retained_intron		3	1	66985685	3136
ENSMUSG00000027293	protein_coding	Ehd4	ENSMUST00000148073	processed_transcript		2	-1	120154462	541
ENSMUSG00000102442	processed_pseudogene	Gm37103	ENSMUST00000191830	processed_pseudogene		1	1	193052500	115
ENSMUSG00000019715	protein_coding	Gle1	ENSMUST00000154490	retained_intron		2	1	29935428	860
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000150766	protein_coding		17	-1	66077022	1513
ENSMUSG00000034544	protein_coding	Rsrc1	ENSMUST00000065047	protein_coding	alternative2	3	1	66985685	2736
ENSMUSG00000019715	protein_coding	Gle1	ENSMUST00000148983	retained_intron		2	1	29935523	776
ENSMUSG00000034544	protein_coding	Rsrc1	ENSMUST00000046542	protein_coding	alternative2	3	1	66985703	3062
ENSMUSG00000037157	protein_coding	Il22ra1	ENSMUST00000102546	protein_coding	principal1	4	1	135728172	2569
ENSMUSG00000102223	processed_pseudogene	Gm37300	ENSMUST00000193327	processed_pseudogene		3	-1	81405572	280
ENSMUSG00000019715	protein_coding	Gle1	ENSMUST00000123608	retained_intron		2	1	29942362	468
ENSMUSG00000034544	protein_coding	Rsrc1	ENSMUST00000162693	protein_coding	alternative2	3	1	66985704	1172
ENSMUSG00000019715	protein_coding	Gle1	ENSMUST00000149730	retained_intron		2	1	29942725	931
ENSMUSG00000055067	protein_coding	Smyd3	ENSMUST00000128302	protein_coding	principal1	1	-1	179518034	6871
ENSMUSG00000019715	protein_coding	Gle1	ENSMUST00000124687	retained_intron		2	1	29949030	371
ENSMUSG00000034544	protein_coding	Rsrc1	ENSMUST00000161726	protein_coding	principal2	3	1	66985967	3213
ENSMUSG00000019952	protein_coding	Poc1b	ENSMUST00000020113	protein_coding	principal1	10	1	99107036	2862
ENSMUSG00000082743	processed_pseudogene	Gm12988	ENSMUST00000119054	processed_pseudogene		4	-1	135756695	478
ENSMUSG00000019715	protein_coding	Gle1	ENSMUST00000127390	retained_intron		2	1	29955507	650
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000143516	retained_intron		17	-1	66077044	2342
ENSMUSG00000034544	protein_coding	Rsrc1	ENSMUST00000160504	protein_coding		3	1	66985978	406
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000129756	retained_intron		17	-1	66077089	1403
ENSMUSG00000013997	protein_coding	Nit1	ENSMUST00000111295	protein_coding		1	-1	171345645	1335
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000135136	retained_intron		17	-1	66077039	943
ENSMUSG00000034544	protein_coding	Rsrc1	ENSMUST00000182708	retained_intron		3	1	66990972	3921
ENSMUSG00000019952	protein_coding	Poc1b	ENSMUST00000159228	protein_coding		10	1	99107082	1799
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000233045	protein_coding		17	-1	66076464	455
ENSMUSG00000034584	protein_coding	Exph5	ENSMUST00000051014	protein_coding	principal1	9	1	53301670	5957
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000167930	protein_coding	alternative2	7	-1	44929490	3376
ENSMUSG00000013997	protein_coding	Nit1	ENSMUST00000111296	protein_coding		1	-1	171345628	1394
ENSMUSG00000060279	protein_coding	Ap2a1	ENSMUST00000085399	protein_coding	alternative1	7	-1	44929490	3442
ENSMUSG00000019952	protein_coding	Poc1b	ENSMUST00000219884	nonsense_mediated_decay		10	1	99107082	1902
ENSMUSG00000034584	protein_coding	Exph5	ENSMUST00000139096	retained_intron		9	1	53341189	2763
ENSMUSG00000034647	protein_coding	Ankrd12	ENSMUST00000124297	processed_transcript		17	-1	66076982	878
ENSMUSG00000013997	protein_coding	Nit1	ENSMUST00000146428	retained_intron		1	-1	171345482	2196
ENSMUSG00000109198	TEC	D7Bwg0826e	ENSMUST00000208484	TEC		7	-1	44898099	3795
ENSMUSG00000055067	protein_coding	Smyd3	ENSMUST00000068437	processed_transcript		1	-1	179248840	3360
ENSMUSG00000066137	protein_coding	Gm11487	ENSMUST00000147434	protein_coding		4	-1	73403449	475
ENSMUSG00000117074	processed_pseudogene	Gm49925	ENSMUST00000233477	processed_pseudogene		17	1	66005705	383
ENSMUSG00000055067	protein_coding	Smyd3	ENSMUST00000131684	processed_transcript		1	-1	179374103	3210
ENSMUSG00000013997	protein_coding	Nit1	ENSMUST00000141357	retained_intron		1	-1	171345640	2932
ENSMUSG00000019952	protein_coding	Poc1b	ENSMUST00000159990	protein_coding		10	1	99107103	3449
ENSMUSG00000055067	protein_coding	Smyd3	ENSMUST00000129393	processed_transcript		1	-1	178989345	693
ENSMUSG00000013997	protein_coding	Nit1	ENSMUST00000148339	protein_coding		1	-1	171345645	559
ENSMUSG00000055067	protein_coding	Smyd3	ENSMUST00000125756	processed_transcript		1	-1	179405419	402
ENSMUSG00000075095	protein_coding	Olfr1229	ENSMUST00000214593	protein_coding	principal1	2	-1	89287954	3404
ENSMUSG00000003731	protein_coding	Kpna6	ENSMUST00000102590	protein_coding	principal2	4	-1	129672767	5710
ENSMUSG00000066137	protein_coding	Gm11487	ENSMUST00000084480	protein_coding	principal1	4	-1	73405072	1323
ENSMUSG00000019952	protein_coding	Poc1b	ENSMUST00000220019	processed_transcript		10	1	99107784	513
ENSMUSG00000050079	protein_coding	Rspry1	ENSMUST00000060389	protein_coding	principal1	8	1	94601937	3852
ENSMUSG00000055067	protein_coding	Smyd3	ENSMUST00000111134	protein_coding		1	-1	179518041	1229
ENSMUSG00000034584	protein_coding	Exph5	ENSMUST00000132410	retained_intron		9	1	53341084	2315
ENSMUSG00000075095	protein_coding	Olfr1229	ENSMUST00000213883	protein_coding	principal1	2	-1	89288014	3594
ENSMUSG00000013997	protein_coding	Nit1	ENSMUST00000156856	protein_coding		1	-1	171345625	929
ENSMUSG00000019952	protein_coding	Poc1b	ENSMUST00000159043	nonsense_mediated_decay		10	1	99129487	999
ENSMUSG00000080222	unprocessed_pseudogene	Gm11486	ENSMUST00000107322	unprocessed_pseudogene		4	-1	73418690	478
ENSMUSG00000009575	protein_coding	Cbx5	ENSMUST00000118152	protein_coding	principal1	15	-1	103239816	8803
ENSMUSG00000104680	processed_pseudogene	Gm9415	ENSMUST00000200462	processed_pseudogene		3	1	138601132	1321
ENSMUSG00000050079	protein_coding	Rspry1	ENSMUST00000212729	protein_coding		8	1	94601965	2800
ENSMUSG00000055067	protein_coding	Smyd3	ENSMUST00000194237	protein_coding		1	-1	179518005	1047
ENSMUSG00000075095	protein_coding	Olfr1229	ENSMUST00000099788	protein_coding	principal1	2	-1	89283157	1019
ENSMUSG00000013997	protein_coding	Nit1	ENSMUST00000136339	retained_intron		1	-1	171344467	516
ENSMUSG00000003731	protein_coding	Kpna6	ENSMUST00000003828	protein_coding	alternative1	4	-1	129662479	2195
ENSMUSG00000019952	protein_coding	Poc1b	ENSMUST00000162704	processed_transcript		10	1	99171284	669
ENSMUSG00000105396	processed_pseudogene	Gm6057	ENSMUST00000195927	processed_pseudogene		3	-1	138604984	314
ENSMUSG00000050079	protein_coding	Rspry1	ENSMUST00000212014	retained_intron		8	1	94601966	3181
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000129558	protein_coding		11	1	97799838	487
ENSMUSG00000019952	protein_coding	Poc1b	ENSMUST00000162847	processed_transcript		10	1	99192892	356
ENSMUSG00000009575	protein_coding	Cbx5	ENSMUST00000108813	protein_coding	principal1	15	-1	103215352	3661
ENSMUSG00000082566	processed_pseudogene	Gm11485	ENSMUST00000120048	processed_pseudogene		4	-1	73423319	1175
ENSMUSG00000003731	protein_coding	Kpna6	ENSMUST00000138916	retained_intron		4	-1	129654935	521
ENSMUSG00000105126	processed_pseudogene	Gm43723	ENSMUST00000196886	processed_pseudogene		3	-1	138643944	189
ENSMUSG00000104149	TEC	Gm37138	ENSMUST00000194564	TEC		1	1	15556249	2089
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000152962	protein_coding		11	1	97799998	433
ENSMUSG00000107443	processed_pseudogene	Gm7468	ENSMUST00000203900	processed_pseudogene		6	-1	142971313	652
ENSMUSG00000117146	transcribed_processed_pseudogene	Fut4-ps1	ENSMUST00000233765	processed_transcript		17	1	56734228	2495
ENSMUSG00000050079	protein_coding	Rspry1	ENSMUST00000121101	protein_coding		8	1	94601978	3092
ENSMUSG00000003731	protein_coding	Kpna6	ENSMUST00000146215	retained_intron		4	-1	129656726	724
ENSMUSG00000117146	transcribed_processed_pseudogene	Fut4-ps1	ENSMUST00000233424	transcribed_processed_pseudogene		17	1	56738332	484
ENSMUSG00000112346	bidirectional_promoter_lncRNA	Gm48768	ENSMUST00000218379	bidirectional_promoter_lncRNA		10	-1	99108080	2290
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000146572	protein_coding		11	1	97800171	376
ENSMUSG00000050079	protein_coding	Rspry1	ENSMUST00000211983	protein_coding	principal1	8	1	94602066	3397
ENSMUSG00000003731	protein_coding	Kpna6	ENSMUST00000126010	protein_coding		4	-1	129672528	389
ENSMUSG00000102937	TEC	Gm38116	ENSMUST00000193873	TEC		1	1	15364302	1533
ENSMUSG00000027833	protein_coding	Shox2	ENSMUST00000162098	protein_coding		3	-1	66981318	2645
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000136723	protein_coding		11	1	97800297	322
ENSMUSG00000003731	protein_coding	Kpna6	ENSMUST00000146361	retained_intron		4	-1	129672767	534
ENSMUSG00000050079	protein_coding	Rspry1	ENSMUST00000154035	retained_intron		8	1	94628602	745
ENSMUSG00000050079	protein_coding	Rspry1	ENSMUST00000211941	retained_intron		8	1	94652377	4157
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000134428	protein_coding		11	1	97800303	337
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000177824	protein_coding		1	-1	156419310	2877
ENSMUSG00000110504	TEC	Gm45797	ENSMUST00000212759	TEC		8	1	94610777	1921
ENSMUSG00000027833	protein_coding	Shox2	ENSMUST00000029422	protein_coding	principal1	3	-1	66981771	3079
ENSMUSG00000039481	protein_coding	Nrtn	ENSMUST00000044752	protein_coding	principal1	17	-1	56757530	1023
ENSMUSG00000092083	protein_coding	Kcnb2	ENSMUST00000175681	protein_coding	principal1	1	1	15287254	3963
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000129828	protein_coding		11	1	97800334	1207
ENSMUSG00000060699	protein_coding	Vmn1r35	ENSMUST00000227749	protein_coding	principal1	6	-1	66685906	2254
ENSMUSG00000027833	protein_coding	Shox2	ENSMUST00000162060	protein_coding		3	-1	66978447	1537
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000127033	protein_coding		11	1	97801998	386
ENSMUSG00000109114	lincRNA	Gm44753	ENSMUST00000207739	lincRNA		7	1	66441598	2335
ENSMUSG00000009575	protein_coding	Cbx5	ENSMUST00000122182	protein_coding	principal1	15	-1	103215305	1146
ENSMUSG00000060699	protein_coding	Vmn1r35	ENSMUST00000227354	protein_coding	principal1	6	-1	66685906	2319
ENSMUSG00000109114	lincRNA	Gm44753	ENSMUST00000208297	lincRNA		7	1	66441886	562
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000148280	protein_coding		11	1	97805192	686
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000138919	protein_coding		11	1	97806310	112
ENSMUSG00000009575	protein_coding	Cbx5	ENSMUST00000127191	protein_coding		15	-1	103215366	376
ENSMUSG00000060699	protein_coding	Vmn1r35	ENSMUST00000227961	protein_coding		6	-1	66685906	1789
ENSMUSG00000013338	protein_coding	Fer1l4	ENSMUST00000109611	protein_coding	principal1	2	-1	156052947	6106
ENSMUSG00000027833	protein_coding	Shox2	ENSMUST00000162439	protein_coding		3	-1	66981141	1081
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000153520	protein_coding		11	1	97806502	503
ENSMUSG00000060699	protein_coding	Vmn1r35	ENSMUST00000227346	protein_coding		6	-1	66685906	1854
ENSMUSG00000092083	protein_coding	Kcnb2	ENSMUST00000170146	protein_coding	principal1	1	1	15312452	14845
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000178036	protein_coding	alternative2	1	-1	156421159	3586
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000155762	protein_coding		11	1	97815248	310
ENSMUSG00000060699	protein_coding	Vmn1r35	ENSMUST00000071414	protein_coding	principal1	6	-1	66679684	891
ENSMUSG00000027833	protein_coding	Shox2	ENSMUST00000195261	protein_coding		3	-1	66978811	414
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000127575	retained_intron		11	1	97833183	758
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000213088	protein_coding	principal2	1	-1	156420428	3561
ENSMUSG00000038366	protein_coding	Lasp1	ENSMUST00000107568	retained_intron		11	1	97833424	580
ENSMUSG00000013338	protein_coding	Fer1l4	ENSMUST00000138297	retained_intron		2	-1	156024876	2111
ENSMUSG00000031728	protein_coding	Zfp821	ENSMUST00000212964	protein_coding		8	1	109705546	2033
ENSMUSG00000063412	protein_coding	Gm10131	ENSMUST00000080152	protein_coding	principal1	8	-1	34111737	736
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000212747	protein_coding		1	-1	156340952	1238
ENSMUSG00000047799	protein_coding	Oog4	ENSMUST00000061277	protein_coding	principal3	4	-1	143450324	1981
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000212342	processed_transcript		1	-1	156340934	990
ENSMUSG00000034450	protein_coding	Gulo	ENSMUST00000059970	protein_coding	principal1	14	-1	66009207	2263
ENSMUSG00000117145	protein_coding	Gm4356	ENSMUST00000233003	protein_coding	principal1	17	1	28726083	618
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000182462	nonsense_mediated_decay		10	-1	89257790	4117
ENSMUSG00000013338	protein_coding	Fer1l4	ENSMUST00000150538	retained_intron		2	-1	156036628	3318
ENSMUSG00000025808	protein_coding	Ccdc7a	ENSMUST00000217343	nonsense_mediated_decay		8	-1	128799166	1233
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000179572	processed_transcript		1	-1	156376492	741
ENSMUSG00000013338	protein_coding	Fer1l4	ENSMUST00000132912	protein_coding		2	-1	156031432	418
ENSMUSG00000025808	protein_coding	Ccdc7a	ENSMUST00000216104	protein_coding		8	-1	128807898	1336
ENSMUSG00000047799	protein_coding	Oog4	ENSMUST00000073641	protein_coding	alternative2	4	-1	143450304	1817
ENSMUSG00000013338	protein_coding	Fer1l4	ENSMUST00000150144	retained_intron		2	-1	156031434	729
ENSMUSG00000105838	lincRNA	4930425O10Rik	ENSMUST00000197761	lincRNA		3	-1	138726984	1418
ENSMUSG00000013338	protein_coding	Fer1l4	ENSMUST00000130764	nonsense_mediated_decay		2	-1	156037363	503
ENSMUSG00000025808	protein_coding	Ccdc7a	ENSMUST00000213135	protein_coding		8	-1	128787368	917
ENSMUSG00000039521	protein_coding	Foxp3	ENSMUST00000234363	protein_coding	principal1	X	1	7579567	2226
ENSMUSG00000103079	lincRNA	Gm36307	ENSMUST00000195831	lincRNA		1	1	175574309	953
ENSMUSG00000031728	protein_coding	Zfp821	ENSMUST00000212192	protein_coding		8	1	109705620	1713
ENSMUSG00000081002	processed_pseudogene	Gm14240	ENSMUST00000120353	processed_pseudogene		2	1	156056128	546
ENSMUSG00000031728	protein_coding	Zfp821	ENSMUST00000212000	protein_coding	principal1	8	1	109706088	2081
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000027895	processed_transcript		1	-1	156399990	2157
ENSMUSG00000039521	protein_coding	Foxp3	ENSMUST00000234479	nonsense_mediated_decay		X	1	7579669	1557
ENSMUSG00000031198	protein_coding	Fundc2	ENSMUST00000033541	protein_coding	principal1	X	1	75382399	2562
ENSMUSG00000031728	protein_coding	Zfp821	ENSMUST00000212233	retained_intron		8	1	109708914	2149
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000180173	protein_coding		1	-1	156398542	1507
ENSMUSG00000031198	protein_coding	Fundc2	ENSMUST00000147998	retained_intron		X	1	75382422	404
ENSMUSG00000031728	protein_coding	Zfp821	ENSMUST00000211918	retained_intron		8	1	109714472	3879
ENSMUSG00000021612	protein_coding	Slc6a18	ENSMUST00000222029	protein_coding	principal3	13	-1	73678001	2005
ENSMUSG00000039521	protein_coding	Foxp3	ENSMUST00000235116	protein_coding	principal1	X	1	7579669	1551
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000177858	processed_transcript		1	-1	156402860	255
ENSMUSG00000031198	protein_coding	Fundc2	ENSMUST00000123540	processed_transcript		X	1	75387102	302
ENSMUSG00000031728	protein_coding	Zfp821	ENSMUST00000034163	protein_coding	principal1	8	1	109705549	2127
ENSMUSG00000021612	protein_coding	Slc6a18	ENSMUST00000223074	protein_coding	alternative2	13	-1	73678001	1975
ENSMUSG00000081633	processed_pseudogene	Gm8522	ENSMUST00000118416	processed_pseudogene		X	-1	75272938	1929
ENSMUSG00000039521	protein_coding	Foxp3	ENSMUST00000115739	protein_coding	principal1	X	1	7579669	3763
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000179985	protein_coding		1	-1	156420886	292
ENSMUSG00000039521	protein_coding	Foxp3	ENSMUST00000234574	protein_coding		X	1	7579676	1477
ENSMUSG00000026601	protein_coding	Axdnd1	ENSMUST00000179744	protein_coding		1	-1	156420922	324
ENSMUSG00000031297	protein_coding	Slc7a3	ENSMUST00000138162	retained_intron		X	-1	101085405	2717
ENSMUSG00000021612	protein_coding	Slc6a18	ENSMUST00000223026	nonsense_mediated_decay		13	-1	73678001	1944
ENSMUSG00000001823	protein_coding	Hoxd12	ENSMUST00000001878	protein_coding	principal1	2	1	74675013	2534
ENSMUSG00000039521	protein_coding	Foxp3	ENSMUST00000115740	protein_coding	principal1	X	1	7579676	3834
ENSMUSG00000021612	protein_coding	Slc6a18	ENSMUST00000220650	protein_coding		13	-1	73678001	1728
ENSMUSG00000020794	protein_coding	Ube2g1	ENSMUST00000021148	protein_coding	principal1	11	1	72607283	3815
ENSMUSG00000021612	protein_coding	Slc6a18	ENSMUST00000220703	nonsense_mediated_decay		13	-1	73666893	522
ENSMUSG00000039521	protein_coding	Foxp3	ENSMUST00000115738	protein_coding	principal1	X	1	7580483	3681
ENSMUSG00000021612	protein_coding	Slc6a18	ENSMUST00000221987	protein_coding		13	-1	73678001	705
ENSMUSG00000039521	protein_coding	Foxp3	ENSMUST00000234015	protein_coding		X	1	7586355	1214
ENSMUSG00000020794	protein_coding	Ube2g1	ENSMUST00000138247	protein_coding		11	1	72607283	3931
ENSMUSG00000021612	protein_coding	Slc6a18	ENSMUST00000221026	protein_coding		13	-1	73678022	420
ENSMUSG00000020794	protein_coding	Ube2g1	ENSMUST00000126046	retained_intron		11	1	72607319	1469
ENSMUSG00000000001	protein_coding	Gnai3	ENSMUST00000000001	protein_coding	principal1	3	-1	108146146	3262
ENSMUSG00000109330	processed_pseudogene	Gm44754	ENSMUST00000208155	processed_pseudogene		7	-1	66565625	400
ENSMUSG00000039521	protein_coding	Foxp3	ENSMUST00000045566	protein_coding	principal1	X	1	7586273	3572
ENSMUSG00000109039	lincRNA	Gm33570	ENSMUST00000207608	lincRNA		7	1	66580756	1254
ENSMUSG00000009654	protein_coding	Oit3	ENSMUST00000009798	protein_coding	principal1	10	-1	59441778	2717
ENSMUSG00000103436	processed_transcript	Gm36995	ENSMUST00000126170	retained_intron		X	-1	7605381	5727
ENSMUSG00000079067	processed_pseudogene	Hmgn2-ps1	ENSMUST00000120716	processed_pseudogene		5	1	84123313	279
ENSMUSG00000009654	protein_coding	Oit3	ENSMUST00000162493	retained_intron		10	-1	59431086	422
ENSMUSG00000042499	protein_coding	Hoxd11	ENSMUST00000048086	processed_transcript		2	1	74679557	3367
ENSMUSG00000109249	TEC	Gm44610	ENSMUST00000209012	TEC		7	-1	66619148	3827
ENSMUSG00000081871	processed_pseudogene	Gm11488	ENSMUST00000117277	processed_pseudogene		4	-1	73498477	863
ENSMUSG00000042499	protein_coding	Hoxd11	ENSMUST00000142312	protein_coding	principal1	2	1	74682323	1111
ENSMUSG00000107591	processed_pseudogene	Gm6794	ENSMUST00000203829	processed_pseudogene		6	1	66711691	457
ENSMUSG00000023971	protein_coding	Rrp36	ENSMUST00000233155	retained_intron		17	-1	46674287	2274
ENSMUSG00000067081	protein_coding	Asb18	ENSMUST00000238685	protein_coding	alternative2	1	-1	89996452	3775
ENSMUSG00000099521	processed_transcript	Gm28309	ENSMUST00000136302	processed_transcript		2	1	74683446	623
ENSMUSG00000039556	protein_coding	Ppp1r3f	ENSMUST00000150787	protein_coding	alternative2	X	-1	7574283	4760
ENSMUSG00000039556	protein_coding	Ppp1r3f	ENSMUST00000115742	protein_coding	principal3	X	-1	7574248	3066
ENSMUSG00000050368	protein_coding	Hoxd10	ENSMUST00000061745	protein_coding	principal1	2	1	74691924	1816
ENSMUSG00000026602	protein_coding	Nphs2	ENSMUST00000027896	protein_coding	principal1	1	1	156310727	3116
ENSMUSG00000023971	protein_coding	Rrp36	ENSMUST00000233136	protein_coding	alternative2	17	-1	46674352	1289
ENSMUSG00000039556	protein_coding	Ppp1r3f	ENSMUST00000142447	processed_transcript		X	-1	7564257	526
ENSMUSG00000026602	protein_coding	Nphs2	ENSMUST00000193020	protein_coding		1	1	156311013	1091
ENSMUSG00000023971	protein_coding	Rrp36	ENSMUST00000233247	processed_transcript		17	-1	46674270	406
ENSMUSG00000039556	protein_coding	Ppp1r3f	ENSMUST00000132788	protein_coding		X	-1	7572843	815
ENSMUSG00000071113	protein_coding	Mboat4	ENSMUST00000095345	protein_coding	principal1	8	1	34115030	1836
ENSMUSG00000023971	protein_coding	Rrp36	ENSMUST00000232697	protein_coding		17	-1	46674287	537
ENSMUSG00000067081	protein_coding	Asb18	ENSMUST00000086882	protein_coding	principal2	1	-1	90014577	3862
ENSMUSG00000039556	protein_coding	Ppp1r3f	ENSMUST00000123090	processed_transcript		X	-1	7564288	486
ENSMUSG00000023971	protein_coding	Rrp36	ENSMUST00000024766	protein_coding	principal2	17	-1	46674255	1195
ENSMUSG00000078193	protein_coding	Gm2000	ENSMUST00000102782	protein_coding	principal1	1	1	156366040	445
ENSMUSG00000067081	protein_coding	Asb18	ENSMUST00000154228	nonsense_mediated_decay		1	-1	90014577	773
ENSMUSG00000109869	antisense	Gm39158	ENSMUST00000210178	antisense		8	-1	34120208	856
ENSMUSG00000115969	lincRNA	Gm46519	ENSMUST00000229763	lincRNA		15	-1	75635910	2847
ENSMUSG00000051483	protein_coding	Cbr1	ENSMUST00000231450	processed_transcript		16	1	93605853	2143
ENSMUSG00000067081	protein_coding	Asb18	ENSMUST00000151330	nonsense_mediated_decay		1	-1	90014577	610
ENSMUSG00000051483	protein_coding	Cbr1	ENSMUST00000232551	processed_transcript		16	1	93606109	727
ENSMUSG00000069895	protein_coding	Atxn1l	ENSMUST00000212605	protein_coding	principal1	8	-1	109737722	7439
ENSMUSG00000069895	protein_coding	Atxn1l	ENSMUST00000212894	processed_transcript		8	-1	109732113	288
ENSMUSG00000069895	protein_coding	Atxn1l	ENSMUST00000212726	protein_coding		8	-1	109737739	461
ENSMUSG00000046793	protein_coding	Gpr61	ENSMUST00000062028	protein_coding	principal1	3	-1	108154882	3686
ENSMUSG00000046793	protein_coding	Gpr61	ENSMUST00000116284	nonsense_mediated_decay		3	-1	108154882	2771
ENSMUSG00000069895	protein_coding	Atxn1l	ENSMUST00000093162	protein_coding	principal1	8	-1	109737739	7526
ENSMUSG00000067081	protein_coding	Asb18	ENSMUST00000097656	protein_coding		1	-1	90014666	788
ENSMUSG00000051483	protein_coding	Cbr1	ENSMUST00000039659	protein_coding	principal1	16	1	93607837	1237
ENSMUSG00000085318	lincRNA	Gm12524	ENSMUST00000143109	lincRNA		3	1	108166443	1583
ENSMUSG00000051483	protein_coding	Cbr1	ENSMUST00000231762	protein_coding		16	1	93607889	593
ENSMUSG00000025808	protein_coding	Ccdc7a	ENSMUST00000214889	protein_coding	alternative2	8	-1	129065512	5544
ENSMUSG00000086077	lincRNA	Gm14396	ENSMUST00000126966	lincRNA		2	1	74695520	548
ENSMUSG00000086077	lincRNA	Gm14396	ENSMUST00000152027	lincRNA		2	1	74695601	462
ENSMUSG00000100209	antisense	Gm28793	ENSMUST00000190845	antisense		2	-1	74697586	413
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000071207	protein_coding	principal1	7	1	44896079	1698
ENSMUSG00000025808	protein_coding	Ccdc7a	ENSMUST00000095158	protein_coding	principal3	8	-1	129065517	1547
ENSMUSG00000050963	protein_coding	Kcns2	ENSMUST00000072868	protein_coding	principal1	15	1	34837355	5456
ENSMUSG00000034601	protein_coding	2700049A03Rik	ENSMUST00000149564	protein_coding	principal4	12	1	71136848	5763
ENSMUSG00000031969	protein_coding	Acad8	ENSMUST00000129490	retained_intron		9	-1	26991053	3188
ENSMUSG00000025808	protein_coding	Ccdc7a	ENSMUST00000125112	protein_coding		8	-1	129065488	1318
ENSMUSG00000050963	protein_coding	Kcns2	ENSMUST00000228725	protein_coding	principal1	15	1	34838049	4906
ENSMUSG00000034601	protein_coding	2700049A03Rik	ENSMUST00000045907	protein_coding	alternative2	12	1	71137840	4507
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000208600	nonsense_mediated_decay		7	1	44896085	1419
ENSMUSG00000025808	protein_coding	Ccdc7a	ENSMUST00000108747	protein_coding	alternative2	8	-1	129065492	1306
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000124499	protein_coding	principal1	14	1	75131554	2523
ENSMUSG00000050947	protein_coding	Amigo1	ENSMUST00000106659	protein_coding		3	1	108186350	1360
ENSMUSG00000034601	protein_coding	2700049A03Rik	ENSMUST00000134748	nonsense_mediated_decay		12	1	71150434	421
ENSMUSG00000102141	protein_coding	Gm3952	ENSMUST00000195093	protein_coding	principal1	8	-1	128798694	573
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000145303	protein_coding	principal1	14	1	75136332	3841
ENSMUSG00000039783	protein_coding	Kmo	ENSMUST00000140474	nonsense_mediated_decay		1	1	175620381	1528
ENSMUSG00000031969	protein_coding	Acad8	ENSMUST00000120367	protein_coding	alternative2	9	-1	26999566	2885
ENSMUSG00000050947	protein_coding	Amigo1	ENSMUST00000106656	protein_coding	principal1	3	1	108186358	5482
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000208291	processed_transcript		7	1	44896086	2583
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000122840	protein_coding		14	1	75136475	678
ENSMUSG00000075094	protein_coding	Olfr1230	ENSMUST00000099787	protein_coding	principal1	2	-1	89297268	918
ENSMUSG00000031969	protein_coding	Acad8	ENSMUST00000151075	retained_intron		9	-1	26977955	785
ENSMUSG00000050947	protein_coding	Amigo1	ENSMUST00000106661	protein_coding		3	1	108188043	651
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000148609	retained_intron		14	1	75174947	1301
ENSMUSG00000113878	processed_pseudogene	Gm19045	ENSMUST00000222488	processed_pseudogene		12	-1	71205444	1193
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000149883	processed_transcript		14	1	75176208	692
ENSMUSG00000050947	protein_coding	Amigo1	ENSMUST00000155782	protein_coding		3	1	108188101	697
ENSMUSG00000031969	protein_coding	Acad8	ENSMUST00000215693	nonsense_mediated_decay		9	-1	26999471	661
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000209132	protein_coding		7	1	44896093	853
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000131802	protein_coding	principal1	14	1	75190329	3594
ENSMUSG00000021998	protein_coding	Lcp1	ENSMUST00000130510	processed_transcript		14	1	75197900	351
ENSMUSG00000050947	protein_coding	Amigo1	ENSMUST00000050909	protein_coding	principal1	3	1	108186335	5030
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000207480	retained_intron		7	1	44896093	2717
ENSMUSG00000075093	protein_coding	Olfr1231	ENSMUST00000216144	protein_coding	principal1	2	-1	89307074	3961
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000109096	protein_coding		2	1	174284320	2465
ENSMUSG00000075093	protein_coding	Olfr1231	ENSMUST00000099786	protein_coding	principal1	2	-1	89303590	942
ENSMUSG00000089733	lincRNA	Gm15628	ENSMUST00000162051	lincRNA		14	-1	75136912	547
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000207069	protein_coding		7	1	44896096	363
ENSMUSG00000061171	protein_coding	Slc38a11	ENSMUST00000152324	protein_coding		2	-1	65364034	1241
ENSMUSG00000031969	protein_coding	Acad8	ENSMUST00000128923	nonsense_mediated_decay		9	-1	26999508	852
ENSMUSG00000090054	antisense	Gm15629	ENSMUST00000161819	antisense		14	-1	75199271	476
ENSMUSG00000108085	lincRNA	A930014E10Rik	ENSMUST00000205115	lincRNA		6	1	142971752	546
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000130940	protein_coding		2	1	174285256	996
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000209039	protein_coding		7	1	44896106	1453
ENSMUSG00000031969	protein_coding	Acad8	ENSMUST00000132293	nonsense_mediated_decay		9	-1	26999506	679
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000130761	protein_coding		2	1	174285358	702
ENSMUSG00000031969	protein_coding	Acad8	ENSMUST00000138102	retained_intron		9	-1	26999505	600
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000207154	nonsense_mediated_decay		7	1	44896146	787
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000207939	protein_coding		7	1	44896252	582
ENSMUSG00000031969	protein_coding	Acad8	ENSMUST00000060513	protein_coding	principal2	9	-1	26999549	2859
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000207485	protein_coding		7	1	44896252	1140
ENSMUSG00000051985	protein_coding	Igfn1	ENSMUST00000140703	nonsense_mediated_decay		1	-1	135963140	1770
ENSMUSG00000061171	protein_coding	Slc38a11	ENSMUST00000155422	processed_transcript		2	-1	65364034	2339
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000208179	protein_coding		7	1	44896252	1164
ENSMUSG00000061171	protein_coding	Slc38a11	ENSMUST00000145583	processed_transcript		2	-1	65363923	2394
ENSMUSG00000061171	protein_coding	Slc38a11	ENSMUST00000127623	protein_coding		2	-1	65361401	1476
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000208908	nonsense_mediated_decay		7	1	44896280	726
ENSMUSG00000104122	TEC	Gm37482	ENSMUST00000194899	TEC		3	1	155094865	2791
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000209163	protein_coding		7	1	44897297	324
ENSMUSG00000061171	protein_coding	Slc38a11	ENSMUST00000124918	protein_coding		2	-1	65363463	1299
ENSMUSG00000031297	protein_coding	Slc7a3	ENSMUST00000101362	protein_coding	principal1	X	-1	101085352	2371
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000207426	retained_intron		7	1	44898181	2144
ENSMUSG00000061171	protein_coding	Slc38a11	ENSMUST00000141690	processed_transcript		2	-1	65364030	658
ENSMUSG00000011658	protein_coding	Fuz	ENSMUST00000207833	retained_intron		7	1	44898267	2245
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000182341	protein_coding	principal2	10	-1	89257590	3959
ENSMUSG00000061171	protein_coding	Slc38a11	ENSMUST00000155962	protein_coding		2	-1	65364000	615
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000109235	protein_coding	alternative2	2	-1	166996278	3569
ENSMUSG00000031297	protein_coding	Slc7a3	ENSMUST00000113710	protein_coding	principal1	X	-1	101086020	2750
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000182613	protein_coding	alternative1	10	-1	89257622	3880
ENSMUSG00000039783	protein_coding	Kmo	ENSMUST00000040250	protein_coding	principal2	1	1	175631996	2695
ENSMUSG00000061171	protein_coding	Slc38a11	ENSMUST00000112420	protein_coding	principal1	2	-1	65364026	1606
ENSMUSG00000028182	protein_coding	Lrriq3	ENSMUST00000195418	retained_intron		3	1	155093434	2148
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000182790	protein_coding	alternative1	10	-1	89257300	4018
ENSMUSG00000031297	protein_coding	Slc7a3	ENSMUST00000126282	processed_transcript		X	-1	101084181	367
ENSMUSG00000074734	protein_coding	Taf7l2	ENSMUST00000220165	processed_transcript		10	-1	116113702	2036
ENSMUSG00000112608	processed_pseudogene	Gm46233	ENSMUST00000217831	processed_pseudogene		10	1	71483081	449
ENSMUSG00000074734	protein_coding	Taf7l2	ENSMUST00000219858	transcribed_processed_pseudogene		10	-1	116113592	1110
ENSMUSG00000031297	protein_coding	Slc7a3	ENSMUST00000144410	retained_intron		X	-1	101082233	570
ENSMUSG00000074734	protein_coding	Taf7l2	ENSMUST00000099261	protein_coding	principal1	10	-1	116113917	2254
ENSMUSG00000112108	lincRNA	4930551I15Rik	ENSMUST00000219700	lincRNA		10	-1	71485520	2143
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000182598	protein_coding		10	-1	88998160	448
ENSMUSG00000031297	protein_coding	Slc7a3	ENSMUST00000151922	retained_intron		X	-1	101082459	544
ENSMUSG00000039783	protein_coding	Kmo	ENSMUST00000142223	retained_intron		1	1	175632001	1600
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000182888	processed_transcript		10	-1	89025054	400
ENSMUSG00000039783	protein_coding	Kmo	ENSMUST00000150646	processed_transcript		1	1	175632026	459
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000079391	protein_coding	principal1	6	1	34598500	4127
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000182041	retained_intron		10	-1	89257554	2046
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000142481	retained_intron		2	-1	166955384	3573
ENSMUSG00000024049	protein_coding	Myom1	ENSMUST00000073211	protein_coding	principal3	17	1	71019521	5648
ENSMUSG00000031297	protein_coding	Slc7a3	ENSMUST00000073927	protein_coding	principal1	X	-1	101085372	2232
ENSMUSG00000039783	protein_coding	Kmo	ENSMUST00000097458	protein_coding	alternative2	1	1	175632180	3672
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000142512	protein_coding		6	1	34598512	956
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000049412	protein_coding	alternative2	2	-1	166996103	2840
ENSMUSG00000039783	protein_coding	Kmo	ENSMUST00000137174	processed_transcript		1	1	175632239	374
ENSMUSG00000024049	protein_coding	Myom1	ENSMUST00000179759	protein_coding	alternative2	17	1	71019560	5316
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000087877	protein_coding		2	1	174297859	3947
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000182419	nonsense_mediated_decay		10	-1	89344645	1385
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000155714	retained_intron		6	1	34598544	1422
ENSMUSG00000037139	protein_coding	Myom3	ENSMUST00000105854	protein_coding	principal1	4	1	135759715	5575
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000183268	nonsense_mediated_decay		10	-1	89257590	2015
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000154182	retained_intron		6	1	34598544	743
ENSMUSG00000024049	protein_coding	Myom1	ENSMUST00000232851	retained_intron		17	1	71019591	4059
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000181976	protein_coding		10	-1	89257136	1410
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000115027	protein_coding		6	1	34598564	4777
ENSMUSG00000024049	protein_coding	Myom1	ENSMUST00000232716	processed_transcript		17	1	71081301	476
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000182624	protein_coding		10	-1	89344645	853
ENSMUSG00000024049	protein_coding	Myom1	ENSMUST00000233653	retained_intron		17	1	71086396	2362
ENSMUSG00000037139	protein_coding	Myom3	ENSMUST00000145304	retained_intron		4	1	135798190	2551
ENSMUSG00000037139	protein_coding	Myom3	ENSMUST00000142177	retained_intron		4	1	135800644	817
ENSMUSG00000024049	protein_coding	Myom1	ENSMUST00000233790	processed_transcript		17	1	71120904	941
ENSMUSG00000035189	protein_coding	Ano4	ENSMUST00000180843	processed_transcript		10	-1	89344762	984
ENSMUSG00000024049	protein_coding	Myom1	ENSMUST00000024847	protein_coding	alternative2	17	1	71019521	5354
ENSMUSG00000107839	lincRNA	4930434O05Rik	ENSMUST00000203259	lincRNA		6	1	142989610	387
ENSMUSG00000104000	lincRNA	Gm38335	ENSMUST00000195727	lincRNA		3	-1	10025539	1789
ENSMUSG00000111117	lincRNA	A730065G17Rik	ENSMUST00000217082	lincRNA		9	1	48049516	3335
ENSMUSG00000002028	protein_coding	Kmt2a	ENSMUST00000114689	protein_coding	alternative2	9	-1	44881296	16470
ENSMUSG00000022427	protein_coding	Tomm22	ENSMUST00000023062	protein_coding	principal2	15	1	79670861	1569
ENSMUSG00000103045	processed_pseudogene	Gm37308	ENSMUST00000194684	processed_pseudogene		3	-1	10089955	100
ENSMUSG00000002028	protein_coding	Kmt2a	ENSMUST00000002095	protein_coding	principal2	9	-1	44881296	16461
ENSMUSG00000061207	protein_coding	Stk19	ENSMUST00000077477	protein_coding	principal1	17	-1	34836945	1120
ENSMUSG00000051985	protein_coding	Igfn1	ENSMUST00000166193	protein_coding	principal2	1	-1	136006342	8989
ENSMUSG00000022427	protein_coding	Tomm22	ENSMUST00000229502	nonsense_mediated_decay		15	1	79670881	595
ENSMUSG00000049230	protein_coding	Gm9833	ENSMUST00000061419	protein_coding	principal1	3	1	10088110	1830
ENSMUSG00000075092	protein_coding	Olfr1232	ENSMUST00000213860	protein_coding	principal1	2	-1	89329650	2413
ENSMUSG00000022427	protein_coding	Tomm22	ENSMUST00000127292	protein_coding	alternative2	15	1	79671091	783
ENSMUSG00000051985	protein_coding	Igfn1	ENSMUST00000124134	protein_coding	alternative2	1	-1	135982482	3661
ENSMUSG00000075092	protein_coding	Olfr1232	ENSMUST00000215679	protein_coding	principal1	2	-1	89329675	2389
ENSMUSG00000026526	protein_coding	Fh1	ENSMUST00000027810	protein_coding	principal1	1	-1	175625635	2636
ENSMUSG00000061207	protein_coding	Stk19	ENSMUST00000161885	nonsense_mediated_decay		17	-1	34836867	805
ENSMUSG00000075092	protein_coding	Olfr1232	ENSMUST00000099785	protein_coding	principal1	2	-1	89326178	936
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000109238	protein_coding	alternative2	2	-1	166996265	2976
ENSMUSG00000002768	protein_coding	Mea1	ENSMUST00000233032	protein_coding		17	1	46678793	603
ENSMUSG00000117180	processed_pseudogene	Gm19399	ENSMUST00000233571	processed_pseudogene		17	1	78458645	153
ENSMUSG00000061207	protein_coding	Stk19	ENSMUST00000162954	retained_intron		17	-1	34826451	2031
ENSMUSG00000026526	protein_coding	Fh1	ENSMUST00000130996	retained_intron		1	-1	175604285	539
ENSMUSG00000081672	processed_pseudogene	Gm13000	ENSMUST00000120937	processed_pseudogene		4	1	135853678	496
ENSMUSG00000082815	protein_coding	Gm5678	ENSMUST00000120115	protein_coding	principal1	16	1	93628097	939
ENSMUSG00000061207	protein_coding	Stk19	ENSMUST00000159333	protein_coding		17	-1	34836465	613
ENSMUSG00000084796	lincRNA	Mir142hg	ENSMUST00000123700	lincRNA		11	1	87755577	269
ENSMUSG00000026526	protein_coding	Fh1	ENSMUST00000133218	retained_intron		1	-1	175606647	936
ENSMUSG00000020241	protein_coding	Col6a2	ENSMUST00000001181	protein_coding	principal1	10	-1	76623630	3949
ENSMUSG00000026526	protein_coding	Fh1	ENSMUST00000176740	protein_coding		1	-1	175609713	542
ENSMUSG00000061062	processed_pseudogene	Hdac1-ps	ENSMUST00000079363	processed_pseudogene		17	1	78491582	1444
ENSMUSG00000031196	protein_coding	F8	ENSMUST00000033539	protein_coding	principal3	X	-1	75382316	9784
ENSMUSG00000026526	protein_coding	Fh1	ENSMUST00000154956	nonsense_mediated_decay		1	-1	175625573	599
ENSMUSG00000075091	protein_coding	Olfr1233	ENSMUST00000215018	processed_transcript		2	-1	89342398	5893
ENSMUSG00000085077	lincRNA	1700049E15Rik	ENSMUST00000152737	lincRNA		6	1	147690241	921
ENSMUSG00000109777	unprocessed_pseudogene	Gm45384	ENSMUST00000210451	unprocessed_pseudogene		16	1	93653088	277
ENSMUSG00000102784	antisense	Gm38251	ENSMUST00000192968	antisense		1	1	184923136	2575
ENSMUSG00000061207	protein_coding	Stk19	ENSMUST00000162055	nonsense_mediated_decay		17	-1	34832495	587
ENSMUSG00000085077	lincRNA	1700049E15Rik	ENSMUST00000141575	lincRNA		6	1	147694727	566
ENSMUSG00000002028	protein_coding	Kmt2a	ENSMUST00000138119	nonsense_mediated_decay		9	-1	44820115	2146
ENSMUSG00000118512	processed_pseudogene	AC160993.1	ENSMUST00000239088	processed_pseudogene		16	-1	93657134	123
ENSMUSG00000061207	protein_coding	Stk19	ENSMUST00000160193	processed_transcript		17	-1	34825770	447
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000115026	protein_coding		6	1	34598565	4080
ENSMUSG00000031196	protein_coding	F8	ENSMUST00000147349	protein_coding		X	-1	75382615	676
ENSMUSG00000002028	protein_coding	Kmt2a	ENSMUST00000152241	nonsense_mediated_decay		9	-1	44848184	4081
ENSMUSG00000075091	protein_coding	Olfr1233	ENSMUST00000215469	protein_coding	principal1	2	-1	89341929	1205
ENSMUSG00000061207	protein_coding	Stk19	ENSMUST00000160993	retained_intron		17	-1	34836927	768
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000127055	retained_intron		6	1	34598620	667
ENSMUSG00000031196	protein_coding	F8	ENSMUST00000151772	protein_coding		X	-1	75382291	587
ENSMUSG00000002768	protein_coding	Mea1	ENSMUST00000232732	protein_coding	principal1	17	1	46680458	748
ENSMUSG00000020241	protein_coding	Col6a2	ENSMUST00000137365	retained_intron		10	-1	76623325	4912
ENSMUSG00000075091	protein_coding	Olfr1233	ENSMUST00000216561	protein_coding	principal1	2	-1	89342398	1192
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000109236	protein_coding	principal3	2	-1	166996299	2860
ENSMUSG00000061207	protein_coding	Stk19	ENSMUST00000161238	retained_intron		17	-1	34836754	412
ENSMUSG00000002028	protein_coding	Kmt2a	ENSMUST00000128768	protein_coding		9	-1	44881296	4336
ENSMUSG00000020241	protein_coding	Col6a2	ENSMUST00000105413	protein_coding		10	-1	76623325	4653
ENSMUSG00000002768	protein_coding	Mea1	ENSMUST00000233644	protein_coding		17	1	46680695	533
ENSMUSG00000075091	protein_coding	Olfr1233	ENSMUST00000099784	protein_coding	principal1	2	-1	89340348	1042
ENSMUSG00000002028	protein_coding	Kmt2a	ENSMUST00000215489	protein_coding		9	-1	44880866	521
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000149454	retained_intron		2	-1	166951231	774
ENSMUSG00000002768	protein_coding	Mea1	ENSMUST00000232762	protein_coding	principal1	17	1	46680783	706
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000184390	nonsense_mediated_decay		2	-1	166964716	1513
ENSMUSG00000111017	TEC	Gm48314	ENSMUST00000213541	TEC		9	-1	44859175	2739
ENSMUSG00000002768	protein_coding	Mea1	ENSMUST00000233430	protein_coding	principal1	17	1	46680986	945
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000115021	protein_coding		6	1	34709442	4041
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000134664	retained_intron		2	-1	166950956	862
ENSMUSG00000110773	antisense	Gm39326	ENSMUST00000213180	antisense		9	1	44877891	1765
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000154506	retained_intron		2	-1	166960322	826
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000201024	retained_intron		6	1	34709490	1264
ENSMUSG00000002768	protein_coding	Mea1	ENSMUST00000233491	protein_coding	principal1	17	1	46681003	673
ENSMUSG00000110773	antisense	Gm39326	ENSMUST00000217585	antisense		9	1	44881728	536
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000130790	retained_intron		2	-1	166963441	788
ENSMUSG00000110773	antisense	Gm39326	ENSMUST00000213473	antisense		9	1	44881750	453
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000149009	nonsense_mediated_decay		6	1	34709490	4096
ENSMUSG00000016181	protein_coding	Utp25	ENSMUST00000194412	protein_coding		1	-1	193114675	336
ENSMUSG00000039536	protein_coding	Stau1	ENSMUST00000130104	processed_transcript		2	-1	166976771	341
ENSMUSG00000031196	protein_coding	F8	ENSMUST00000114085	protein_coding	alternative2	X	-1	75380041	7295
ENSMUSG00000002768	protein_coding	Mea1	ENSMUST00000002845	protein_coding	principal1	17	1	46681124	859
ENSMUSG00000027528	protein_coding	Fabp9	ENSMUST00000193487	protein_coding		3	-1	10197222	486
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000031775	protein_coding		6	1	34709634	2142
ENSMUSG00000083736	processed_pseudogene	Gm6039	ENSMUST00000121667	processed_pseudogene		X	1	75233063	1250
ENSMUSG00000096474	processed_pseudogene	Gm5561	ENSMUST00000178932	processed_pseudogene		1	-1	179520857	480
ENSMUSG00000002768	protein_coding	Mea1	ENSMUST00000233612	protein_coding	principal1	17	1	46681180	766
ENSMUSG00000002768	protein_coding	Mea1	ENSMUST00000233385	protein_coding		17	1	46681392	757
ENSMUSG00000027528	protein_coding	Fabp9	ENSMUST00000191678	protein_coding		3	-1	10197283	647
ENSMUSG00000027528	protein_coding	Fabp9	ENSMUST00000029038	protein_coding	principal1	3	-1	10197222	583
ENSMUSG00000114535	TEC	Gm47246	ENSMUST00000225230	TEC		13	1	59603309	2354
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000123823	protein_coding		6	1	34745952	633
ENSMUSG00000052468	protein_coding	Pmp2	ENSMUST00000029034	protein_coding	principal1	3	-1	10183929	1408
ENSMUSG00000000093	protein_coding	Tbx2	ENSMUST00000000095	protein_coding	principal1	11	1	85832551	3626
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000136907	protein_coding		6	1	34745981	1063
ENSMUSG00000016181	protein_coding	Utp25	ENSMUST00000193460	protein_coding		1	-1	193117557	731
ENSMUSG00000103124	protein_coding	Gm37389	ENSMUST00000194885	nonsense_mediated_decay	principal1	3	-1	10197262	1568
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000126181	protein_coding		6	1	34746007	413
ENSMUSG00000024253	protein_coding	Dync2li1	ENSMUST00000025101	protein_coding	principal1	17	1	84626496	1354
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000142716	protein_coding		6	1	34746386	821
ENSMUSG00000116603	processed_pseudogene	Gm8118	ENSMUST00000232508	processed_pseudogene		16	-1	22686194	845
ENSMUSG00000024253	protein_coding	Dync2li1	ENSMUST00000234861	retained_intron		17	1	84649275	647
ENSMUSG00000086019	lincRNA	Gm15762	ENSMUST00000126447	lincRNA		6	-1	147719451	333
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000146685	retained_intron		6	1	34747773	262
ENSMUSG00000026620	protein_coding	Mark1	ENSMUST00000027929	protein_coding	principal1	1	-1	184999570	4221
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000201956	retained_intron		6	1	34762860	3972
ENSMUSG00000114396	lincRNA	Gm31227	ENSMUST00000225482	lincRNA		14	1	68461631	585
ENSMUSG00000029761	protein_coding	Cald1	ENSMUST00000132331	retained_intron		6	1	34764956	674
ENSMUSG00000026620	protein_coding	Mark1	ENSMUST00000192657	protein_coding		1	-1	184999475	927
ENSMUSG00000080899	processed_pseudogene	Gm9109	ENSMUST00000120254	processed_pseudogene		X	1	102655659	1405
ENSMUSG00000086834	antisense	Gm14547	ENSMUST00000138341	antisense		6	-1	34735389	371
ENSMUSG00000007603	protein_coding	Dus3l	ENSMUST00000233290	retained_intron		17	1	56764757	2128
ENSMUSG00000060411	antisense	Npn2	ENSMUST00000189275	antisense		6	-1	34726906	235
ENSMUSG00000083414	processed_pseudogene	Gm14840	ENSMUST00000122135	processed_pseudogene		X	-1	102658334	594
ENSMUSG00000060411	antisense	Npn2	ENSMUST00000075773	antisense		6	-1	34726905	75
ENSMUSG00000081443	protein_coding	Gm3880	ENSMUST00000122154	protein_coding	principal1	X	-1	102686972	337
ENSMUSG00000022119	protein_coding	Rbm26	ENSMUST00000163545	protein_coding	alternative2	14	-1	105176860	3270
ENSMUSG00000092266	sense_intronic	Gm20500	ENSMUST00000174621	sense_intronic		5	1	92736205	321
ENSMUSG00000025040	protein_coding	Fundc1	ENSMUST00000026016	protein_coding	principal1	X	-1	17572325	1983
ENSMUSG00000079479	protein_coding	Gm9112	ENSMUST00000113610	protein_coding	principal1	X	-1	102707635	420
ENSMUSG00000007603	protein_coding	Dus3l	ENSMUST00000007747	protein_coding	principal1	17	1	56764778	2025
ENSMUSG00000025040	protein_coding	Fundc1	ENSMUST00000177213	protein_coding		X	-1	17571641	1032
ENSMUSG00000025040	protein_coding	Fundc1	ENSMUST00000127690	processed_transcript		X	-1	17571624	637
ENSMUSG00000016181	protein_coding	Utp25	ENSMUST00000085555	protein_coding	principal1	1	-1	193130272	5570
ENSMUSG00000025040	protein_coding	Fundc1	ENSMUST00000176638	protein_coding		X	-1	17572253	448
ENSMUSG00000016181	protein_coding	Utp25	ENSMUST00000195291	nonsense_mediated_decay		1	-1	193130244	5504
ENSMUSG00000084029	processed_pseudogene	Gm8855	ENSMUST00000118888	processed_pseudogene		X	-1	87673869	878
ENSMUSG00000025040	protein_coding	Fundc1	ENSMUST00000142638	protein_coding		X	-1	17572007	597
ENSMUSG00000016181	protein_coding	Utp25	ENSMUST00000193070	retained_intron		1	-1	193115378	687
ENSMUSG00000007603	protein_coding	Dus3l	ENSMUST00000233549	retained_intron		17	1	56764784	2749
ENSMUSG00000016181	protein_coding	Utp25	ENSMUST00000191928	retained_intron		1	-1	193122471	709
ENSMUSG00000028182	protein_coding	Lrriq3	ENSMUST00000029833	protein_coding	principal2	3	1	155093434	2652
ENSMUSG00000007603	protein_coding	Dus3l	ENSMUST00000232684	retained_intron		17	1	56765734	2184
ENSMUSG00000116165	protein_coding	Pdxp	ENSMUST00000089378	protein_coding	principal1	15	1	78913919	2001
ENSMUSG00000016181	protein_coding	Utp25	ENSMUST00000194335	processed_transcript		1	-1	193128345	487
ENSMUSG00000083421	processed_pseudogene	Gm14776	ENSMUST00000121029	processed_pseudogene		X	-1	87772352	887
ENSMUSG00000028182	protein_coding	Lrriq3	ENSMUST00000192383	protein_coding	alternative2	3	1	155093538	1717
ENSMUSG00000016181	protein_coding	Utp25	ENSMUST00000195848	nonsense_mediated_decay		1	-1	193130207	428
ENSMUSG00000063576	protein_coding	Klhdc3	ENSMUST00000071841	protein_coding	principal1	17	-1	46680904	2100
ENSMUSG00000040061	protein_coding	Plcb2	ENSMUST00000102524	protein_coding	principal3	2	-1	118728438	5145
ENSMUSG00000083779	processed_pseudogene	Gm14775	ENSMUST00000122089	processed_pseudogene		X	1	86792474	310
ENSMUSG00000028182	protein_coding	Lrriq3	ENSMUST00000194376	protein_coding	alternative2	3	1	155093588	1340
ENSMUSG00000116069	protein_coding	Gm49510	ENSMUST00000134703	protein_coding	principal1	15	1	78899667	2762
ENSMUSG00000016181	protein_coding	Utp25	ENSMUST00000194124	processed_transcript		1	-1	193123808	290
ENSMUSG00000063576	protein_coding	Klhdc3	ENSMUST00000165007	protein_coding	principal1	17	-1	46680914	1954
ENSMUSG00000040061	protein_coding	Plcb2	ENSMUST00000159756	protein_coding	alternative2	2	-1	118728359	4518
ENSMUSG00000004098	protein_coding	Col5a3	ENSMUST00000004201	protein_coding	principal1	9	-1	20815067	6119
ENSMUSG00000103511	processed_pseudogene	Gm5285	ENSMUST00000193089	processed_pseudogene		3	-1	155276723	666
ENSMUSG00000063576	protein_coding	Klhdc3	ENSMUST00000233733	protein_coding		17	-1	46680803	1854
ENSMUSG00000040061	protein_coding	Plcb2	ENSMUST00000129153	retained_intron		2	-1	118711370	2278
ENSMUSG00000082850	processed_pseudogene	Gm14299	ENSMUST00000117586	processed_pseudogene		2	1	179993188	397
ENSMUSG00000063576	protein_coding	Klhdc3	ENSMUST00000232776	protein_coding		17	-1	46680366	952
ENSMUSG00000040061	protein_coding	Plcb2	ENSMUST00000126907	retained_intron		2	-1	118709741	708
ENSMUSG00000099034	transcribed_unitary_pseudogene	2810039B14Rik	ENSMUST00000183928	processed_transcript		15	1	75642129	1459
ENSMUSG00000063576	protein_coding	Klhdc3	ENSMUST00000233524	protein_coding		17	-1	46680789	534
ENSMUSG00000021556	protein_coding	Golm1	ENSMUST00000022039	protein_coding	principal1	13	-1	59675811	3954
ENSMUSG00000099034	transcribed_unitary_pseudogene	2810039B14Rik	ENSMUST00000184602	processed_transcript		15	1	75642475	530
ENSMUSG00000103295	unprocessed_pseudogene	Scp2-ps1	ENSMUST00000193152	unprocessed_pseudogene		3	1	155514441	499
ENSMUSG00000040061	protein_coding	Plcb2	ENSMUST00000127248	retained_intron		2	-1	118714104	1248
ENSMUSG00000099034	transcribed_unitary_pseudogene	2810039B14Rik	ENSMUST00000184801	processed_transcript		15	1	75642484	2796
ENSMUSG00000022119	protein_coding	Rbm26	ENSMUST00000100327	protein_coding	principal2	14	-1	105177323	3634
ENSMUSG00000004098	protein_coding	Col5a3	ENSMUST00000145974	retained_intron		9	-1	20815067	3927
ENSMUSG00000099034	transcribed_unitary_pseudogene	2810039B14Rik	ENSMUST00000185040	transcribed_unitary_pseudogene		15	1	75643486	1113
ENSMUSG00000059409	protein_coding	Ppp2r5d	ENSMUST00000233082	retained_intron		17	-1	46685326	1587
ENSMUSG00000103981	processed_pseudogene	Gm37449	ENSMUST00000193016	processed_pseudogene		3	-1	155755240	270
ENSMUSG00000022119	protein_coding	Rbm26	ENSMUST00000022715	protein_coding	alternative1	14	-1	105177327	3633
ENSMUSG00000099034	transcribed_unitary_pseudogene	2810039B14Rik	ENSMUST00000184938	retained_intron		15	1	75644499	2234
ENSMUSG00000052372	protein_coding	Il1rapl1	ENSMUST00000113966	protein_coding	principal1	X	-1	88115645	9133
ENSMUSG00000099034	transcribed_unitary_pseudogene	2810039B14Rik	ENSMUST00000184665	processed_transcript		15	1	75644663	810
ENSMUSG00000022119	protein_coding	Rbm26	ENSMUST00000163499	protein_coding		14	-1	105177264	4212
ENSMUSG00000104329	TEC	Gm37324	ENSMUST00000194500	TEC		3	-1	155775828	4504
ENSMUSG00000052372	protein_coding	Il1rapl1	ENSMUST00000113964	protein_coding		X	-1	88115645	1936
ENSMUSG00000021556	protein_coding	Golm1	ENSMUST00000095739	protein_coding	principal1	13	-1	59675780	3689
ENSMUSG00000111137	processed_pseudogene	Gm2553	ENSMUST00000215986	processed_pseudogene		9	-1	63801797	605
ENSMUSG00000021192	protein_coding	Golga5	ENSMUST00000179218	protein_coding	principal1	12	1	102469135	2827
ENSMUSG00000102443	processed_pseudogene	Gm37102	ENSMUST00000195740	processed_pseudogene		3	1	155903348	1105
ENSMUSG00000003200	protein_coding	Sh3gl1	ENSMUST00000003268	protein_coding	principal1	17	-1	56036635	2073
ENSMUSG00000052372	protein_coding	Il1rapl1	ENSMUST00000078875	protein_coding	principal1	X	-1	87890235	2091
ENSMUSG00000110768	processed_pseudogene	Gm18541	ENSMUST00000215935	processed_pseudogene		9	1	63898265	538
ENSMUSG00000026492	protein_coding	Tfb2m	ENSMUST00000027769	protein_coding	principal1	1	-1	179546267	2449
ENSMUSG00000021556	protein_coding	Golm1	ENSMUST00000225333	processed_transcript		13	-1	59675772	660
ENSMUSG00000003200	protein_coding	Sh3gl1	ENSMUST00000233803	protein_coding		17	-1	56036576	1375
ENSMUSG00000022947	protein_coding	Cbr3	ENSMUST00000039620	protein_coding	principal1	16	1	93683215	1170
ENSMUSG00000081424	processed_pseudogene	Gm14774	ENSMUST00000117857	processed_pseudogene		X	-1	88036906	536
ENSMUSG00000021556	protein_coding	Golm1	ENSMUST00000224160	processed_transcript		13	-1	59675780	523
ENSMUSG00000104377	processed_pseudogene	Gm37515	ENSMUST00000193321	processed_pseudogene		3	1	155904509	3817
ENSMUSG00000111058	lincRNA	Gm36033	ENSMUST00000214004	lincRNA		9	-1	63937121	640
ENSMUSG00000003200	protein_coding	Sh3gl1	ENSMUST00000233034	retained_intron		17	-1	56036568	3093
ENSMUSG00000111058	lincRNA	Gm36033	ENSMUST00000214827	lincRNA		9	-1	63927749	745
ENSMUSG00000022947	protein_coding	Cbr3	ENSMUST00000231302	nonsense_mediated_decay		16	1	93683259	703
ENSMUSG00000021192	protein_coding	Golga5	ENSMUST00000021609	protein_coding	principal1	12	1	102469192	3390
ENSMUSG00000084755	processed_pseudogene	Gm16276	ENSMUST00000131218	processed_pseudogene		17	-1	56014544	262
ENSMUSG00000110924	lincRNA	Gm40518	ENSMUST00000213821	lincRNA		9	-1	48151430	4060
ENSMUSG00000026492	protein_coding	Tfb2m	ENSMUST00000139993	processed_transcript		1	-1	179533697	406
ENSMUSG00000104553	lincRNA	9330178D15Rik	ENSMUST00000196033	lincRNA		3	1	155976354	3451
ENSMUSG00000110924	lincRNA	Gm40518	ENSMUST00000214538	lincRNA		9	-1	48158965	4080
ENSMUSG00000021192	protein_coding	Golga5	ENSMUST00000222744	protein_coding		12	1	102484457	814
ENSMUSG00000104826	lincRNA	Gm42947	ENSMUST00000198230	lincRNA		3	-1	156045856	675
ENSMUSG00000026492	protein_coding	Tfb2m	ENSMUST00000129982	processed_transcript		1	-1	179546217	986
ENSMUSG00000026492	protein_coding	Tfb2m	ENSMUST00000150778	processed_transcript		1	-1	179533667	458
ENSMUSG00000105949	processed_pseudogene	Gm6510	ENSMUST00000195916	processed_pseudogene		3	1	156060891	574
ENSMUSG00000026492	protein_coding	Tfb2m	ENSMUST00000129009	processed_transcript		1	-1	179545892	828
ENSMUSG00000104573	processed_pseudogene	Gm42886	ENSMUST00000199214	processed_pseudogene		3	1	156264586	466
ENSMUSG00000036867	protein_coding	Smad6	ENSMUST00000041029	protein_coding	principal1	9	-1	64022059	2971
ENSMUSG00000082395	processed_pseudogene	Gm15480	ENSMUST00000120442	processed_pseudogene		1	1	179538417	519
ENSMUSG00000059409	protein_coding	Ppp2r5d	ENSMUST00000233988	protein_coding	alternative2	17	-1	46705111	3038
ENSMUSG00000040061	protein_coding	Plcb2	ENSMUST00000006415	retained_intron		2	-1	118728391	2456
ENSMUSG00000053353	antisense	2310001K24Rik	ENSMUST00000186760	antisense		2	1	163471957	740
ENSMUSG00000053353	antisense	2310001K24Rik	ENSMUST00000065731	antisense		2	1	163472545	459
ENSMUSG00000059409	protein_coding	Ppp2r5d	ENSMUST00000233757	retained_intron		17	-1	46686919	485
ENSMUSG00000090273	protein_coding	Prr22	ENSMUST00000187612	retained_intron		17	1	56770250	1959
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000168367	protein_coding		13	1	59585259	374
ENSMUSG00000036867	protein_coding	Smad6	ENSMUST00000144323	processed_transcript		9	-1	64016987	417
ENSMUSG00000059409	protein_coding	Ppp2r5d	ENSMUST00000002839	protein_coding	principal2	17	-1	46705002	2926
ENSMUSG00000048486	protein_coding	Fitm2	ENSMUST00000109418	protein_coding	principal1	2	-1	163472629	3967
ENSMUSG00000036867	protein_coding	Smad6	ENSMUST00000179458	protein_coding		9	-1	64022032	273
ENSMUSG00000090273	protein_coding	Prr22	ENSMUST00000168666	protein_coding	principal1	17	1	56770276	1350
ENSMUSG00000115831	processed_pseudogene	Gm48937	ENSMUST00000226837	processed_pseudogene		14	-1	105184385	362
ENSMUSG00000107402	TEC	4732416N19Rik	ENSMUST00000203932	TEC		6	1	148212253	3479
ENSMUSG00000103942	lincRNA	Gm34732	ENSMUST00000195441	lincRNA		1	-1	185085964	445
ENSMUSG00000093616	processed_transcript	1700055C04Rik	ENSMUST00000176450	processed_transcript		9	-1	64041465	355
ENSMUSG00000103478	lincRNA	4930433J02Rik	ENSMUST00000194719	lincRNA		1	1	185086102	1386
ENSMUSG00000115247	processed_pseudogene	Gm6201	ENSMUST00000226852	processed_pseudogene		14	-1	105201099	1774
ENSMUSG00000028152	protein_coding	Tspan5	ENSMUST00000029800	protein_coding	principal1	3	1	138742195	6653
ENSMUSG00000093759	processed_transcript	Scarletltr	ENSMUST00000176950	processed_transcript		9	1	64080761	305
ENSMUSG00000030509	protein_coding	Asb7	ENSMUST00000131320	nonsense_mediated_decay		7	-1	66688884	4484
ENSMUSG00000028152	protein_coding	Tspan5	ENSMUST00000142890	nonsense_mediated_decay		3	1	138742305	3000
ENSMUSG00000104461	lincRNA	Gm37662	ENSMUST00000195649	lincRNA		1	1	185091991	667
ENSMUSG00000028152	protein_coding	Tspan5	ENSMUST00000127772	nonsense_mediated_decay		3	1	138742505	654
ENSMUSG00000048796	protein_coding	Cyb561d1	ENSMUST00000106655	protein_coding	principal1	3	-1	108200834	4275
ENSMUSG00000030509	protein_coding	Asb7	ENSMUST00000124899	protein_coding	principal1	7	-1	66689596	4928
ENSMUSG00000086260	processed_pseudogene	Gm16259	ENSMUST00000145241	processed_pseudogene		14	-1	105292984	553
ENSMUSG00000003199	protein_coding	Mpnd	ENSMUST00000133998	protein_coding		17	1	56005711	606
ENSMUSG00000030509	protein_coding	Asb7	ENSMUST00000207785	processed_transcript		7	-1	66655024	572
ENSMUSG00000030509	protein_coding	Asb7	ENSMUST00000068980	retained_intron		7	-1	66689474	2137
ENSMUSG00000030509	protein_coding	Asb7	ENSMUST00000207210	processed_transcript		7	-1	66689547	457
ENSMUSG00000030509	protein_coding	Asb7	ENSMUST00000208059	retained_intron		7	-1	66689515	540
ENSMUSG00000048796	protein_coding	Cyb561d1	ENSMUST00000065664	protein_coding		3	-1	108200834	4058
ENSMUSG00000058656	protein_coding	Samd12	ENSMUST00000078673	protein_coding	principal1	15	-1	53902530	9019
ENSMUSG00000048796	protein_coding	Cyb561d1	ENSMUST00000155099	processed_transcript		3	-1	108201212	4677
ENSMUSG00000048796	protein_coding	Cyb561d1	ENSMUST00000106654	protein_coding		3	-1	108200595	1914
ENSMUSG00000058656	protein_coding	Samd12	ENSMUST00000154119	processed_transcript		15	-1	53902537	1051
ENSMUSG00000058656	protein_coding	Samd12	ENSMUST00000132059	nonsense_mediated_decay		15	-1	53902381	356
ENSMUSG00000022436	protein_coding	Sh3bp1	ENSMUST00000061239	protein_coding	principal3	15	1	78899768	1917
ENSMUSG00000058656	protein_coding	Samd12	ENSMUST00000132362	processed_transcript		15	-1	53902537	471
ENSMUSG00000072584	protein_coding	Gm7489	ENSMUST00000100666	protein_coding	principal1	15	1	53884906	1222
ENSMUSG00000115761	antisense	1700015H07Rik	ENSMUST00000227291	antisense		15	1	53621655	560
ENSMUSG00000024254	protein_coding	Abcg8	ENSMUST00000170725	protein_coding		17	1	84676302	2415
ENSMUSG00000078949	protein_coding	R3hdml	ENSMUST00000109416	protein_coding	principal1	2	1	163492318	1094
ENSMUSG00000022436	protein_coding	Sh3bp1	ENSMUST00000151146	nonsense_mediated_decay		15	1	78899768	1840
ENSMUSG00000022436	protein_coding	Sh3bp1	ENSMUST00000132047	nonsense_mediated_decay		15	1	78899768	2096
ENSMUSG00000039108	protein_coding	Lsm14b	ENSMUST00000055485	protein_coding	principal1	2	1	180024987	2534
ENSMUSG00000097408	lincRNA	Gm26831	ENSMUST00000181458	lincRNA		1	1	119058469	1380
ENSMUSG00000022436	protein_coding	Sh3bp1	ENSMUST00000109698	protein_coding	alternative2	15	1	78899768	1923
ENSMUSG00000053253	protein_coding	Ndfip2	ENSMUST00000181969	protein_coding	principal1	14	1	105258573	2532
ENSMUSG00000028152	protein_coding	Tspan5	ENSMUST00000153336	protein_coding		3	1	138742769	422
ENSMUSG00000053253	protein_coding	Ndfip2	ENSMUST00000138283	protein_coding		14	1	105258753	1695
ENSMUSG00000039108	protein_coding	Lsm14b	ENSMUST00000058764	protein_coding		2	1	180026398	2566
ENSMUSG00000028152	protein_coding	Tspan5	ENSMUST00000142001	nonsense_mediated_decay		3	1	138778206	885
ENSMUSG00000022436	protein_coding	Sh3bp1	ENSMUST00000001226	protein_coding	alternative2	15	1	78899903	2375
ENSMUSG00000028152	protein_coding	Tspan5	ENSMUST00000135629	protein_coding		3	1	138778207	541
ENSMUSG00000053253	protein_coding	Ndfip2	ENSMUST00000155351	retained_intron		14	1	105258818	3061
ENSMUSG00000039108	protein_coding	Lsm14b	ENSMUST00000140257	processed_transcript		2	1	180027909	733
ENSMUSG00000028152	protein_coding	Tspan5	ENSMUST00000146356	protein_coding		3	1	138782854	602
ENSMUSG00000022436	protein_coding	Sh3bp1	ENSMUST00000148893	protein_coding		15	1	78900428	331
ENSMUSG00000053253	protein_coding	Ndfip2	ENSMUST00000149781	retained_intron		14	1	105292289	7759
ENSMUSG00000028152	protein_coding	Tspan5	ENSMUST00000119993	protein_coding		3	1	138809874	2107
ENSMUSG00000028152	protein_coding	Tspan5	ENSMUST00000121826	protein_coding		3	1	138860493	1114
ENSMUSG00000022436	protein_coding	Sh3bp1	ENSMUST00000229492	retained_intron		15	1	78903628	598
ENSMUSG00000086123	processed_pseudogene	Gm16060	ENSMUST00000153140	processed_pseudogene		3	-1	138829162	478
ENSMUSG00000017950	protein_coding	Hnf4a	ENSMUST00000143911	protein_coding		2	1	163506808	431
ENSMUSG00000022436	protein_coding	Sh3bp1	ENSMUST00000231057	retained_intron		15	1	78906418	391
ENSMUSG00000022436	protein_coding	Sh3bp1	ENSMUST00000229803	retained_intron		15	1	78908165	901
ENSMUSG00000017950	protein_coding	Hnf4a	ENSMUST00000131658	processed_transcript		2	1	163546817	659
ENSMUSG00000053253	protein_coding	Ndfip2	ENSMUST00000127286	retained_intron		14	1	105292681	3198
ENSMUSG00000084864	antisense	1700027A07Rik	ENSMUST00000150472	antisense		15	-1	78913660	458
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000022038	protein_coding	principal1	13	1	59585295	3793
ENSMUSG00000085084	lincRNA	4930570G19Rik	ENSMUST00000149387	lincRNA		3	-1	156561687	986
ENSMUSG00000053253	protein_coding	Ndfip2	ENSMUST00000149358	processed_transcript		14	1	105294546	1521
ENSMUSG00000085084	lincRNA	4930570G19Rik	ENSMUST00000148224	lincRNA		3	-1	156561582	772
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000166923	protein_coding		13	1	59585394	779
ENSMUSG00000085084	lincRNA	4930570G19Rik	ENSMUST00000139363	lincRNA		3	-1	156561675	3112
ENSMUSG00000024254	protein_coding	Abcg8	ENSMUST00000045714	protein_coding	principal3	17	1	84683121	3667
ENSMUSG00000085084	lincRNA	4930570G19Rik	ENSMUST00000140941	lincRNA		3	-1	156561746	693
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000225670	retained_intron		13	1	59585420	2051
ENSMUSG00000024254	protein_coding	Abcg8	ENSMUST00000171915	protein_coding	alternative2	17	1	84683131	2284
ENSMUSG00000103516	unprocessed_pseudogene	Gm37431	ENSMUST00000195102	unprocessed_pseudogene		1	-1	181022773	111
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000172419	protein_coding		13	1	59586170	1207
ENSMUSG00000102858	TEC	Gm37086	ENSMUST00000193082	TEC		1	1	181026278	3452
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000163521	retained_intron		13	1	59595359	674
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000174226	retained_intron		17	-1	34850210	4119
ENSMUSG00000033249	protein_coding	Hsf4	ENSMUST00000173640	nonsense_mediated_decay		8	1	105269801	1476
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000164011	nonsense_mediated_decay		13	1	59598116	708
ENSMUSG00000115222	antisense	Gm49747	ENSMUST00000228007	antisense		14	1	55643604	2749
ENSMUSG00000115789	processed_pseudogene	Gm18147	ENSMUST00000226248	processed_pseudogene		14	1	75264217	545
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000163395	retained_intron		13	1	59609257	3082
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000171391	retained_intron		13	1	59609382	754
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000168242	retained_intron		13	1	59609417	566
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000172166	protein_coding		13	1	59609502	638
ENSMUSG00000003199	protein_coding	Mpnd	ENSMUST00000149441	protein_coding	principal2	17	1	56009201	1701
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000165841	processed_transcript		13	1	59617911	371
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000168633	retained_intron		13	1	59617961	478
ENSMUSG00000003199	protein_coding	Mpnd	ENSMUST00000162883	protein_coding		17	1	56009208	1400
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000165253	protein_coding		13	1	59617962	443
ENSMUSG00000003199	protein_coding	Mpnd	ENSMUST00000159996	protein_coding	alternative2	17	1	56009231	1444
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000165129	retained_intron		13	1	59624444	506
ENSMUSG00000003199	protein_coding	Mpnd	ENSMUST00000124302	retained_intron		17	1	56009255	924
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000224194	retained_intron		13	1	59627647	1042
ENSMUSG00000021999	protein_coding	Cpb2	ENSMUST00000022576	protein_coding	principal1	14	1	75242287	1477
ENSMUSG00000003199	protein_coding	Mpnd	ENSMUST00000159340	protein_coding		17	1	56009333	1379
ENSMUSG00000021555	protein_coding	Naa35	ENSMUST00000172118	retained_intron		13	1	59632725	526
ENSMUSG00000003199	protein_coding	Mpnd	ENSMUST00000140926	retained_intron		17	1	56009933	755
ENSMUSG00000003199	protein_coding	Mpnd	ENSMUST00000153197	protein_coding	alternative2	17	1	56010440	866
ENSMUSG00000021999	protein_coding	Cpb2	ENSMUST00000227817	retained_intron		14	1	75272349	853
ENSMUSG00000031200	protein_coding	Mtcp1	ENSMUST00000033542	protein_coding	principal1	X	-1	75416543	1592
ENSMUSG00000003199	protein_coding	Mpnd	ENSMUST00000159420	retained_intron		17	1	56011943	350
ENSMUSG00000031200	protein_coding	Mtcp1	ENSMUST00000143538	processed_transcript		X	-1	75416418	1109
ENSMUSG00000096852	protein_coding	Cyp2d12	ENSMUST00000229103	protein_coding		15	1	82555072	646
ENSMUSG00000031200	protein_coding	Mtcp1	ENSMUST00000114081	protein_coding	principal1	X	-1	75416588	980
ENSMUSG00000031200	protein_coding	Mtcp1	ENSMUST00000147830	retained_intron		X	-1	75416568	3071
ENSMUSG00000040505	protein_coding	Abcg5	ENSMUST00000066175	protein_coding	principal1	17	-1	84683011	2351
ENSMUSG00000025533	protein_coding	Asl	ENSMUST00000161094	protein_coding	principal1	5	-1	130024381	1824
ENSMUSG00000090110	protein_coding	Cmc4	ENSMUST00000033543	protein_coding	principal1	X	-1	75416565	992
ENSMUSG00000025533	protein_coding	Asl	ENSMUST00000159096	protein_coding		5	-1	130014722	864
ENSMUSG00000040505	protein_coding	Abcg5	ENSMUST00000163375	protein_coding		17	-1	84682202	1613
ENSMUSG00000025533	protein_coding	Asl	ENSMUST00000159619	protein_coding	principal1	5	-1	130029247	2088
ENSMUSG00000096852	protein_coding	Cyp2d12	ENSMUST00000230859	retained_intron		15	1	82555072	1742
ENSMUSG00000090110	protein_coding	Cmc4	ENSMUST00000149863	protein_coding	principal1	X	-1	75416584	507
ENSMUSG00000017950	protein_coding	Hnf4a	ENSMUST00000109411	protein_coding		2	1	163547187	4362
ENSMUSG00000040505	protein_coding	Abcg5	ENSMUST00000171544	processed_transcript		17	-1	84674370	944
ENSMUSG00000017950	protein_coding	Hnf4a	ENSMUST00000137449	protein_coding		2	1	163550083	692
ENSMUSG00000090110	protein_coding	Cmc4	ENSMUST00000120286	protein_coding	principal1	X	-1	75409912	516
ENSMUSG00000040505	protein_coding	Abcg5	ENSMUST00000172439	retained_intron		17	-1	84676426	850
ENSMUSG00000025533	protein_coding	Asl	ENSMUST00000160129	protein_coding	principal1	5	-1	130025019	2413
ENSMUSG00000017950	protein_coding	Hnf4a	ENSMUST00000018094	protein_coding	principal1	2	1	163547188	4356
ENSMUSG00000025533	protein_coding	Asl	ENSMUST00000161640	protein_coding		5	-1	130024300	923
ENSMUSG00000025533	protein_coding	Asl	ENSMUST00000160557	processed_transcript		5	-1	130024373	644
ENSMUSG00000025533	protein_coding	Asl	ENSMUST00000161884	protein_coding		5	-1	130024317	289
ENSMUSG00000046840	antisense	Hnf4aos	ENSMUST00000141329	antisense		2	-1	163541720	839
ENSMUSG00000046840	antisense	Hnf4aos	ENSMUST00000128896	antisense		2	-1	163541720	635
ENSMUSG00000025533	protein_coding	Asl	ENSMUST00000162230	retained_intron		5	-1	130024345	1862
ENSMUSG00000046840	antisense	Hnf4aos	ENSMUST00000125811	antisense		2	-1	163541692	370
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000163751	protein_coding	alternative2	7	1	101421691	4218
ENSMUSG00000038180	protein_coding	Spag4	ENSMUST00000133511	retained_intron		2	1	156065175	2022
ENSMUSG00000038180	protein_coding	Spag4	ENSMUST00000125996	retained_intron		2	1	156065198	3892
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000053733	protein_coding		5	-1	84416921	7328
ENSMUSG00000038180	protein_coding	Spag4	ENSMUST00000136765	retained_intron		2	1	156065227	2203
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000136008	protein_coding	principal1	6	-1	148212374	4174
ENSMUSG00000022707	protein_coding	Gbe1	ENSMUST00000163832	protein_coding	principal5	16	1	70313949	2984
ENSMUSG00000022707	protein_coding	Gbe1	ENSMUST00000099628	retained_intron		16	1	70314063	1026
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000211368	protein_coding	principal3	7	1	101421709	3885
ENSMUSG00000051860	protein_coding	Samd7	ENSMUST00000174395	nonsense_mediated_decay		3	1	30746293	3058
ENSMUSG00000096852	protein_coding	Cyp2d12	ENSMUST00000068861	protein_coding	principal1	15	1	82555089	1654
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000113403	protein_coding	principal5	5	-1	84416806	4675
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000120041	protein_coding	principal1	14	-1	55643251	2164
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000113406	protein_coding	alternative2	5	-1	84416806	4606
ENSMUSG00000096852	protein_coding	Cyp2d12	ENSMUST00000229792	retained_intron		15	1	82555090	3862
ENSMUSG00000096852	protein_coding	Cyp2d12	ENSMUST00000229988	retained_intron		15	1	82555091	2716
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000122358	protein_coding	principal1	14	-1	55643806	2517
ENSMUSG00000096852	protein_coding	Cyp2d12	ENSMUST00000228974	nonsense_mediated_decay		15	1	82555111	859
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000113398	protein_coding		5	-1	84416806	4830
ENSMUSG00000096852	protein_coding	Cyp2d12	ENSMUST00000229904	protein_coding		15	1	82555114	1422
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000121937	protein_coding		14	-1	55643315	2398
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000113399	protein_coding	alternative2	5	-1	84416806	5166
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000121791	protein_coding	principal1	14	-1	55643354	2148
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000113401	protein_coding		5	-1	84417359	5158
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000149726	nonsense_mediated_decay		14	-1	55643361	2089
ENSMUSG00000051860	protein_coding	Samd7	ENSMUST00000108262	protein_coding	principal1	3	1	30746340	3144
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000002391	protein_coding	principal1	14	-1	55643340	2382
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000210364	nonsense_mediated_decay		7	1	101421846	4105
ENSMUSG00000051860	protein_coding	Samd7	ENSMUST00000172593	nonsense_mediated_decay		3	1	30751045	1511
ENSMUSG00000022707	protein_coding	Gbe1	ENSMUST00000164300	retained_intron		16	1	70314064	3734
ENSMUSG00000044229	protein_coding	Nxpe4	ENSMUST00000216998	protein_coding	alternative2	9	1	48162023	4871
ENSMUSG00000051860	protein_coding	Samd7	ENSMUST00000192872	retained_intron		3	1	30756222	1241
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000209537	protein_coding	alternative2	7	1	101450520	4100
ENSMUSG00000034762	protein_coding	Glis1	ENSMUST00000046005	protein_coding	principal2	4	1	107434719	2906
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000132338	protein_coding		14	-1	55643523	1742
ENSMUSG00000022707	protein_coding	Gbe1	ENSMUST00000169432	retained_intron		16	1	70560994	658
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000210092	nonsense_mediated_decay		7	1	101450556	423
ENSMUSG00000034762	protein_coding	Glis1	ENSMUST00000106738	protein_coding	alternative2	4	1	107438998	2744
ENSMUSG00000044229	protein_coding	Nxpe4	ENSMUST00000215780	protein_coding	principal2	9	1	48162115	2875
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000209695	retained_intron		7	1	101451316	639
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000130167	processed_transcript		14	-1	55641060	485
ENSMUSG00000034762	protein_coding	Glis1	ENSMUST00000130573	processed_transcript		4	1	107434591	501
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000127473	retained_intron		14	-1	55643371	2271
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000154804	retained_intron		5	-1	84416921	3236
ENSMUSG00000034762	protein_coding	Glis1	ENSMUST00000135835	protein_coding		4	1	107434617	432
ENSMUSG00000083930	processed_pseudogene	Gm13042	ENSMUST00000119244	processed_pseudogene		4	-1	143460538	1955
ENSMUSG00000044229	protein_coding	Nxpe4	ENSMUST00000217002	retained_intron		9	1	48389851	4715
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000152573	retained_intron		5	-1	84416921	2496
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000139313	processed_transcript		14	-1	55643560	840
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000146588	retained_intron		14	-1	55641599	760
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000211051	processed_transcript		7	1	101452128	1138
ENSMUSG00000044229	protein_coding	Nxpe4	ENSMUST00000093853	protein_coding	principal2	9	1	48362041	3173
ENSMUSG00000084059	unprocessed_pseudogene	Gm13046	ENSMUST00000117391	unprocessed_pseudogene		4	-1	143464774	501
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000155469	retained_intron		5	-1	84417382	2933
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000138085	protein_coding		14	-1	55643771	708
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000136775	retained_intron		5	-1	84417382	2246
ENSMUSG00000034762	protein_coding	Glis1	ENSMUST00000138211	processed_transcript		4	1	107581203	470
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000210100	processed_transcript		7	1	101456062	484
ENSMUSG00000034762	protein_coding	Glis1	ENSMUST00000125573	processed_transcript		4	1	107615000	852
ENSMUSG00000029245	protein_coding	Epha5	ENSMUST00000200076	retained_intron		5	-1	84362066	3677
ENSMUSG00000002320	protein_coding	Tm9sf1	ENSMUST00000133707	protein_coding		14	-1	55643333	576
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000210535	processed_transcript		7	1	101460944	575
ENSMUSG00000073027	protein_coding	Dmrtc1b	ENSMUST00000113609	protein_coding	alternative2	X	1	102711177	1239
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000210348	retained_intron		7	1	101481285	542
ENSMUSG00000073027	protein_coding	Dmrtc1b	ENSMUST00000118842	protein_coding	alternative2	X	1	102711177	1321
ENSMUSG00000112416	lincRNA	Gm47028	ENSMUST00000218284	lincRNA		10	-1	71522298	1255
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000209315	retained_intron		7	1	101501617	567
ENSMUSG00000024076	protein_coding	Vit	ENSMUST00000024880	protein_coding	principal2	17	1	78508064	2708
ENSMUSG00000073027	protein_coding	Dmrtc1b	ENSMUST00000101324	protein_coding	principal3	X	1	102707865	1200
ENSMUSG00000022707	protein_coding	Gbe1	ENSMUST00000023393	protein_coding	alternative2	16	1	70314087	2846
ENSMUSG00000115232	protein_coding	Gm49378	ENSMUST00000156420	nonsense_mediated_decay	principal1	14	-1	55637895	3275
ENSMUSG00000024076	protein_coding	Vit	ENSMUST00000232859	protein_coding	alternative2	17	1	78508172	2544
ENSMUSG00000024076	protein_coding	Vit	ENSMUST00000233470	processed_transcript		17	1	78573928	520
ENSMUSG00000112624	processed_pseudogene	Gm19074	ENSMUST00000218915	processed_pseudogene		10	-1	71613075	1429
ENSMUSG00000022707	protein_coding	Gbe1	ENSMUST00000171132	protein_coding		16	1	70314064	3303
ENSMUSG00000110195	protein_coding	Pde2a	ENSMUST00000166652	protein_coding	principal3	7	1	101421709	3977
ENSMUSG00000024076	protein_coding	Vit	ENSMUST00000232864	retained_intron		17	1	78573945	626
ENSMUSG00000080845	processed_pseudogene	Gm9115	ENSMUST00000120192	processed_pseudogene		X	-1	102725749	1348
ENSMUSG00000111965	processed_pseudogene	Gm4797	ENSMUST00000219075	processed_pseudogene		10	-1	71597129	1283
ENSMUSG00000022707	protein_coding	Gbe1	ENSMUST00000170464	protein_coding	alternative2	16	1	70314134	2736
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000046022	protein_coding	principal1	17	-1	34850210	3951
ENSMUSG00000097786	antisense	4933429H19Rik	ENSMUST00000187361	antisense		3	-1	30793564	995
ENSMUSG00000081716	unprocessed_pseudogene	Gm14839	ENSMUST00000117983	unprocessed_pseudogene		X	1	102735986	714
ENSMUSG00000112126	lincRNA	Gm34544	ENSMUST00000218514	lincRNA		10	1	71527281	1046
ENSMUSG00000097786	antisense	4933429H19Rik	ENSMUST00000180833	antisense		3	-1	30793560	423
ENSMUSG00000112126	lincRNA	Gm34544	ENSMUST00000218801	lincRNA		10	1	71527302	871
ENSMUSG00000112126	lincRNA	Gm34544	ENSMUST00000219004	lincRNA		10	1	71663631	1114
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000174887	retained_intron		17	-1	34850192	3995
ENSMUSG00000112126	lincRNA	Gm34544	ENSMUST00000218434	lincRNA		10	1	71663631	834
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000174363	retained_intron		17	-1	34850198	4520
ENSMUSG00000081108	unprocessed_pseudogene	Gm4234	ENSMUST00000119747	unprocessed_pseudogene		X	1	102754781	714
ENSMUSG00000007867	protein_coding	Ift43	ENSMUST00000221194	processed_transcript		12	1	86082541	838
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000172803	retained_intron		17	-1	34841128	462
ENSMUSG00000083680	unprocessed_pseudogene	Gm9119	ENSMUST00000118866	unprocessed_pseudogene		X	1	102777738	495
ENSMUSG00000032028	protein_coding	Nxpe2	ENSMUST00000034527	protein_coding	principal1	9	-1	48340898	3366
ENSMUSG00000022426	protein_coding	Josd1	ENSMUST00000023061	protein_coding	principal1	15	-1	79687919	3440
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000173415	protein_coding		17	-1	34842865	727
ENSMUSG00000082191	unprocessed_pseudogene	Gm5166	ENSMUST00000121332	unprocessed_pseudogene		X	1	102794298	573
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000172878	retained_intron		17	-1	34844456	817
ENSMUSG00000116239	processed_pseudogene	Gm49520	ENSMUST00000230256	processed_pseudogene		15	-1	79681322	221
ENSMUSG00000032028	protein_coding	Nxpe2	ENSMUST00000135457	nonsense_mediated_decay		9	-1	48340834	1433
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000173403	retained_intron		17	-1	34847193	927
ENSMUSG00000032028	protein_coding	Nxpe2	ENSMUST00000137976	protein_coding		9	-1	48353454	629
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000172686	retained_intron		17	-1	34846639	832
ENSMUSG00000027706	protein_coding	Sec62	ENSMUST00000029256	protein_coding	principal1	3	1	30792875	3967
ENSMUSG00000046434	protein_coding	Hnrnpa1	ENSMUST00000036004	protein_coding	principal4	15	1	103240432	1918
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000173305	retained_intron		17	-1	34846031	458
ENSMUSG00000027706	protein_coding	Sec62	ENSMUST00000191730	retained_intron		3	1	30793336	639
ENSMUSG00000040356	protein_coding	Skiv2l	ENSMUST00000172966	nonsense_mediated_decay		17	-1	34850195	881
ENSMUSG00000027706	protein_coding	Sec62	ENSMUST00000195072	processed_transcript		3	1	30818851	558
ENSMUSG00000046434	protein_coding	Hnrnpa1	ENSMUST00000230171	nonsense_mediated_decay		15	1	103240432	1283
ENSMUSG00000032028	protein_coding	Nxpe2	ENSMUST00000149185	processed_transcript		9	-1	48340854	1037
ENSMUSG00000046434	protein_coding	Hnrnpa1	ENSMUST00000087351	protein_coding	alternative1	15	1	103240454	1737
ENSMUSG00000032028	protein_coding	Nxpe2	ENSMUST00000142667	processed_transcript		9	-1	48353454	517
ENSMUSG00000046434	protein_coding	Hnrnpa1	ENSMUST00000230489	nonsense_mediated_decay		15	1	103240467	3118
ENSMUSG00000081877	processed_pseudogene	Gm8858	ENSMUST00000118259	processed_pseudogene		X	1	88388559	342
ENSMUSG00000046434	protein_coding	Hnrnpa1	ENSMUST00000231141	protein_coding		15	1	103240494	1541
ENSMUSG00000082595	processed_pseudogene	Gm14793	ENSMUST00000118739	processed_pseudogene		X	1	88393954	311
ENSMUSG00000081892	processed_pseudogene	Gm8864	ENSMUST00000118653	processed_pseudogene		X	-1	88573060	1010
ENSMUSG00000036167	protein_coding	Pphln1	ENSMUST00000109256	protein_coding	alternative2	15	1	93398350	1154
ENSMUSG00000083058	processed_pseudogene	Gm14795	ENSMUST00000118461	processed_pseudogene		X	1	88613357	471
ENSMUSG00000038180	protein_coding	Spag4	ENSMUST00000038860	protein_coding	principal1	2	1	156065244	1473
ENSMUSG00000084355	processed_pseudogene	Gm14792	ENSMUST00000119725	processed_pseudogene		X	-1	88685021	258
ENSMUSG00000038180	protein_coding	Spag4	ENSMUST00000138178	nonsense_mediated_decay		2	1	156065437	438
ENSMUSG00000050641	protein_coding	BC048562	ENSMUST00000057265	protein_coding	principal1	9	1	108436482	690
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000173874	protein_coding		17	1	34837019	1117
ENSMUSG00000038180	protein_coding	Spag4	ENSMUST00000131144	nonsense_mediated_decay		2	1	156065553	370
ENSMUSG00000038180	protein_coding	Spag4	ENSMUST00000137966	protein_coding		2	1	156065742	747
ENSMUSG00000086142	processed_pseudogene	Ppp4r3c-ps	ENSMUST00000151416	processed_pseudogene		X	1	88729828	2445
ENSMUSG00000038180	protein_coding	Spag4	ENSMUST00000149139	processed_transcript		2	1	156066735	667
ENSMUSG00000050641	protein_coding	BC048562	ENSMUST00000192955	processed_transcript		9	1	108436494	561
ENSMUSG00000081673	processed_pseudogene	Gm14794	ENSMUST00000118181	processed_pseudogene		X	1	88749452	192
ENSMUSG00000114804	processed_pseudogene	Gm18073	ENSMUST00000223850	processed_pseudogene		14	-1	59622667	552
ENSMUSG00000022056	protein_coding	Adam7	ENSMUST00000022640	protein_coding	principal1	14	-1	68533689	3469
ENSMUSG00000032401	protein_coding	Lctl	ENSMUST00000034969	protein_coding	principal1	9	1	64117147	2171
ENSMUSG00000044461	protein_coding	Shisa2	ENSMUST00000053949	protein_coding	principal1	14	1	59625308	3119
ENSMUSG00000032401	protein_coding	Lctl	ENSMUST00000145011	retained_intron		9	1	64117172	650
ENSMUSG00000022056	protein_coding	Adam7	ENSMUST00000128069	retained_intron		14	-1	68509971	1497
ENSMUSG00000032401	protein_coding	Lctl	ENSMUST00000139755	processed_transcript		9	1	64117229	335
ENSMUSG00000022056	protein_coding	Adam7	ENSMUST00000225673	retained_intron		14	-1	68533741	741
ENSMUSG00000044461	protein_coding	Shisa2	ENSMUST00000224155	processed_transcript		14	1	59627189	596
ENSMUSG00000032401	protein_coding	Lctl	ENSMUST00000124020	nonsense_mediated_decay		9	1	64117259	2000
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000046244	protein_coding	principal1	17	1	34837019	1519
ENSMUSG00000032401	protein_coding	Lctl	ENSMUST00000118215	protein_coding		9	1	64121606	1380
ENSMUSG00000083640	processed_pseudogene	Gm8876	ENSMUST00000120768	processed_pseudogene		X	-1	88756695	1122
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000032446	nonsense_mediated_decay		6	-1	148212107	1661
ENSMUSG00000032401	protein_coding	Lctl	ENSMUST00000132018	retained_intron		9	1	64122035	440
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000173644	retained_intron		17	1	34837082	956
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000143282	protein_coding		6	-1	148188092	769
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000173995	protein_coding		17	1	34837248	584
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000204832	nonsense_mediated_decay		6	-1	148183208	578
ENSMUSG00000033249	protein_coding	Hsf4	ENSMUST00000036127	protein_coding	principal1	8	1	105269801	1739
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000174092	protein_coding		17	1	34837399	738
ENSMUSG00000036167	protein_coding	Pphln1	ENSMUST00000049122	protein_coding		15	1	93398397	3573
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000203268	protein_coding		6	-1	148195258	628
ENSMUSG00000097961	lincRNA	Gm27000	ENSMUST00000182943	lincRNA		X	-1	88760312	842
ENSMUSG00000033249	protein_coding	Hsf4	ENSMUST00000173102	nonsense_mediated_decay		8	1	105269829	1600
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000126773	retained_intron		6	-1	148196243	801
ENSMUSG00000033249	protein_coding	Hsf4	ENSMUST00000172525	protein_coding		8	1	105269856	1276
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000149631	retained_intron		6	-1	148189706	482
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000173063	nonsense_mediated_decay		17	1	34837657	701
ENSMUSG00000082847	processed_pseudogene	Gm5759	ENSMUST00000119203	processed_pseudogene		X	-1	88898506	811
ENSMUSG00000033249	protein_coding	Hsf4	ENSMUST00000174837	protein_coding		8	1	105269874	1251
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000174684	nonsense_mediated_decay		17	1	34837993	427
ENSMUSG00000081167	processed_pseudogene	Gm8880	ENSMUST00000121800	processed_pseudogene		X	1	88959217	454
ENSMUSG00000033249	protein_coding	Hsf4	ENSMUST00000173859	protein_coding		8	1	105269874	1576
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000174569	nonsense_mediated_decay		17	1	34838295	480
ENSMUSG00000033249	protein_coding	Hsf4	ENSMUST00000163734	protein_coding		8	1	105269801	1630
ENSMUSG00000084060	processed_pseudogene	Gm16412	ENSMUST00000121602	processed_pseudogene		X	1	89005370	273
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000172612	protein_coding		17	1	34838324	583
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000047131	protein_coding	principal1	14	-1	55635684	3846
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000173768	retained_intron		17	1	34838548	497
ENSMUSG00000082311	processed_pseudogene	Gm14791	ENSMUST00000119061	processed_pseudogene		X	-1	89060541	1166
ENSMUSG00000081458	processed_pseudogene	Gm14796	ENSMUST00000121216	processed_pseudogene		X	-1	89088054	959
ENSMUSG00000067562	protein_coding	Dmrtc1c1	ENSMUST00000118218	protein_coding	principal1	X	1	102802963	1611
ENSMUSG00000040482	protein_coding	Dxo	ENSMUST00000180043	protein_coding	principal1	17	1	34837019	1447
ENSMUSG00000025701	protein_coding	Alox5	ENSMUST00000026795	protein_coding	principal1	6	-1	116461178	2821
ENSMUSG00000081033	processed_pseudogene	Gm14797	ENSMUST00000119378	processed_pseudogene		X	-1	89112496	1480
ENSMUSG00000067562	protein_coding	Dmrtc1c1	ENSMUST00000131451	protein_coding		X	1	102804223	457
ENSMUSG00000085956	processed_transcript	4930481B07Rik	ENSMUST00000128160	lincRNA		3	1	95015625	1089
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000086041	protein_coding	principal1	7	-1	19604486	2180
ENSMUSG00000105103	protein_coding	Gm43191	ENSMUST00000140672	protein_coding	principal1	3	-1	116681260	704
ENSMUSG00000085956	processed_transcript	4930481B07Rik	ENSMUST00000151207	processed_transcript		3	1	95016249	430
ENSMUSG00000079019	protein_coding	Insl3	ENSMUST00000034261	protein_coding	principal1	8	1	71689214	623
ENSMUSG00000082665	processed_pseudogene	Gm11470	ENSMUST00000118868	processed_pseudogene		2	-1	167009039	1475
ENSMUSG00000007867	protein_coding	Ift43	ENSMUST00000054565	protein_coding	principal2	12	1	86082563	773
ENSMUSG00000007867	protein_coding	Ift43	ENSMUST00000222821	protein_coding	alternative2	12	1	86082587	783
ENSMUSG00000083923	unprocessed_pseudogene	Gm649	ENSMUST00000117284	unprocessed_pseudogene		X	-1	89282171	1054
ENSMUSG00000007867	protein_coding	Ift43	ENSMUST00000222905	protein_coding		12	1	86082608	520
ENSMUSG00000036167	protein_coding	Pphln1	ENSMUST00000068457	protein_coding	principal3	15	1	93398400	3351
ENSMUSG00000118508	unprocessed_pseudogene	AL732291.1	ENSMUST00000239154	unprocessed_pseudogene		X	-1	89337233	615
ENSMUSG00000025701	protein_coding	Alox5	ENSMUST00000167447	retained_intron		6	-1	116461131	3576
ENSMUSG00000023284	protein_coding	Zfp605	ENSMUST00000112528	protein_coding	principal1	5	1	110110092	3158
ENSMUSG00000083597	processed_pseudogene	Gm14805	ENSMUST00000120172	processed_pseudogene		X	1	89397111	340
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000166123	protein_coding	principal1	12	1	111538016	4050
ENSMUSG00000025701	protein_coding	Alox5	ENSMUST00000169625	retained_intron		6	-1	116412792	956
ENSMUSG00000036167	protein_coding	Pphln1	ENSMUST00000229071	protein_coding	alternative2	15	1	93398432	1198
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000148351	nonsense_mediated_decay		14	-1	55635631	3474
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000193286	protein_coding	principal1	9	-1	108461581	2956
ENSMUSG00000036167	protein_coding	Pphln1	ENSMUST00000165935	protein_coding	alternative2	15	1	93398464	3473
ENSMUSG00000023284	protein_coding	Zfp605	ENSMUST00000144089	processed_transcript		5	1	110110336	937
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000222441	protein_coding		12	1	111538197	690
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000141848	retained_intron		14	-1	55626432	605
ENSMUSG00000023284	protein_coding	Zfp605	ENSMUST00000147631	protein_coding		5	1	110110351	748
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000192245	retained_intron		9	-1	108450804	2478
ENSMUSG00000023284	protein_coding	Zfp605	ENSMUST00000086686	protein_coding	principal1	5	1	110112052	2085
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000155464	processed_transcript		14	-1	55627563	422
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000194559	retained_intron		9	-1	108452718	4136
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000146528	processed_transcript		14	-1	55626417	451
ENSMUSG00000036167	protein_coding	Pphln1	ENSMUST00000230385	protein_coding		15	1	93399208	592
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000221648	retained_intron		12	1	111538216	814
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000220918	retained_intron		12	1	111538216	2388
ENSMUSG00000036167	protein_coding	Pphln1	ENSMUST00000229721	processed_transcript		15	1	93432945	583
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000195435	protein_coding		9	-1	108452404	1612
ENSMUSG00000025701	protein_coding	Alox5	ENSMUST00000203722	nonsense_mediated_decay		6	-1	116461024	1787
ENSMUSG00000007867	protein_coding	Ift43	ENSMUST00000223269	processed_transcript		12	1	86082608	787
ENSMUSG00000089911	protein_coding	Mfsd14a	ENSMUST00000029570	protein_coding	principal1	3	-1	116662677	2782
ENSMUSG00000081865	processed_pseudogene	Gm15484	ENSMUST00000118871	processed_pseudogene		5	-1	110118849	828
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000141499	protein_coding		14	-1	55627390	452
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000222375	protein_coding	principal1	12	1	111538216	3547
ENSMUSG00000007867	protein_coding	Ift43	ENSMUST00000221161	processed_transcript		12	1	86092122	450
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000193895	protein_coding	principal1	9	-1	108461076	2718
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000203993	processed_transcript		6	-1	148212374	1744
ENSMUSG00000025701	protein_coding	Alox5	ENSMUST00000164547	protein_coding		6	-1	116461024	1854
ENSMUSG00000007867	protein_coding	Ift43	ENSMUST00000220711	retained_intron		12	1	86139948	372
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000208427	retained_intron		7	-1	19582986	901
ENSMUSG00000089911	protein_coding	Mfsd14a	ENSMUST00000196274	retained_intron		3	-1	116636473	3880
ENSMUSG00000098924	processed_pseudogene	Gm27245	ENSMUST00000184385	processed_pseudogene		9	1	76658075	376
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000222388	protein_coding		12	1	111538216	3543
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000140311	retained_intron		6	-1	148196528	820
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000135221	nonsense_mediated_decay		14	-1	55635957	3824
ENSMUSG00000089911	protein_coding	Mfsd14a	ENSMUST00000130631	retained_intron		3	-1	116645732	647
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000194633	processed_transcript		9	-1	108450369	801
ENSMUSG00000101652	processed_pseudogene	Gm6060	ENSMUST00000188671	processed_pseudogene		1	-1	15760668	251
ENSMUSG00000025701	protein_coding	Alox5	ENSMUST00000170186	protein_coding		6	-1	116461024	1929
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000193911	processed_transcript		9	-1	108452766	297
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000134574	processed_transcript		6	-1	148195241	233
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000126064	retained_intron		14	-1	55627924	420
ENSMUSG00000100814	processed_pseudogene	Gm28669	ENSMUST00000188400	processed_pseudogene		1	1	15760761	100
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000221292	nonsense_mediated_decay		12	1	111538353	1024
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000193159	retained_intron		9	-1	108452801	601
ENSMUSG00000089911	protein_coding	Mfsd14a	ENSMUST00000138418	retained_intron		3	-1	116662491	657
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000228754	processed_transcript		14	-1	55630210	798
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000130242	nonsense_mediated_decay		6	-1	148212022	868
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000221872	retained_intron		12	1	111538355	629
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000192160	processed_transcript		9	-1	108460929	732
ENSMUSG00000025701	protein_coding	Alox5	ENSMUST00000167585	retained_intron		6	-1	116414020	546
ENSMUSG00000089911	protein_coding	Mfsd14a	ENSMUST00000150402	retained_intron		3	-1	116662610	838
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000192196	retained_intron		9	-1	108460929	780
ENSMUSG00000099239	processed_pseudogene	Gm27155	ENSMUST00000183716	processed_pseudogene		9	-1	76761009	898
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000127773	retained_intron		14	-1	55630660	956
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000145162	processed_transcript		6	-1	148196345	549
ENSMUSG00000025701	protein_coding	Alox5	ENSMUST00000167174	processed_transcript		6	-1	116424963	659
ENSMUSG00000106125	lincRNA	4930512P04Rik	ENSMUST00000197000	lincRNA		3	1	116663732	424
ENSMUSG00000111222	lincRNA	Gm34158	ENSMUST00000216390	lincRNA		9	1	76754767	567
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000125469	retained_intron		6	-1	148202790	604
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000193331	retained_intron		9	-1	108456950	1794
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000150951	retained_intron		14	-1	55633658	436
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000148437	retained_intron		6	-1	148211977	817
ENSMUSG00000105339	antisense	Gm42457	ENSMUST00000197572	antisense		3	1	116631671	367
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000050993	protein_coding	principal1	12	1	111538782	1969
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000077977	protein_coding	principal1	2	1	30364233	3381
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000126698	protein_coding		6	-1	148212022	399
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000192210	processed_transcript		9	-1	108461073	554
ENSMUSG00000023391	protein_coding	Dlx2	ENSMUST00000024159	protein_coding	principal1	2	-1	71546754	2473
ENSMUSG00000110839	lincRNA	Gm47800	ENSMUST00000214015	lincRNA		9	-1	76823062	1886
ENSMUSG00000027652	protein_coding	Ralgapb	ENSMUST00000109486	protein_coding	alternative1	2	1	158409848	8383
ENSMUSG00000035395	protein_coding	Dcaf8l	ENSMUST00000113959	protein_coding	principal1	X	-1	89409689	4183
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000148942	retained_intron		14	-1	55635210	452
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000195869	retained_intron		9	-1	108460078	1062
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000146308	processed_transcript		2	1	30364245	413
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000150980	retained_intron		6	-1	148212021	599
ENSMUSG00000023391	protein_coding	Dlx2	ENSMUST00000134249	retained_intron		2	-1	71545950	626
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000220803	protein_coding		12	1	111538831	633
ENSMUSG00000002319	protein_coding	Ipo4	ENSMUST00000125133	protein_coding		14	-1	55635569	606
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000193618	retained_intron		9	-1	108460928	1696
ENSMUSG00000098888	processed_pseudogene	Gm18486	ENSMUST00000184040	processed_pseudogene		9	-1	76869483	298
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000140075	protein_coding		2	1	30364254	2196
ENSMUSG00000030304	protein_coding	Ergic2	ENSMUST00000132413	processed_transcript		6	-1	148212005	713
ENSMUSG00000035395	protein_coding	Dcaf8l	ENSMUST00000113960	protein_coding	principal1	X	-1	89409689	4182
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000221363	retained_intron		12	1	111539031	2584
ENSMUSG00000032609	protein_coding	Klhdc8b	ENSMUST00000035232	protein_coding	principal1	9	-1	108452377	1897
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000222234	protein_coding		12	1	111539071	1022
ENSMUSG00000081628	processed_pseudogene	Gm14804	ENSMUST00000122322	processed_pseudogene		X	-1	89419275	508
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000137441	retained_intron		2	1	30364266	1793
ENSMUSG00000027652	protein_coding	Ralgapb	ENSMUST00000150789	retained_intron		2	1	158409876	2332
ENSMUSG00000049305	protein_coding	Ccdc71	ENSMUST00000061209	protein_coding	principal1	9	1	108460527	3092
ENSMUSG00000082422	processed_pseudogene	Gm6973	ENSMUST00000117080	processed_pseudogene		X	-1	89440895	721
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000222757	nonsense_mediated_decay		12	1	111539438	1635
ENSMUSG00000049305	protein_coding	Ccdc71	ENSMUST00000193269	protein_coding		9	1	108460535	384
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000090938	protein_coding	principal2	3	-1	88950414	4760
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000142801	protein_coding		2	1	30364293	813
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000223437	retained_intron		12	1	111539579	664
ENSMUSG00000049305	protein_coding	Ccdc71	ENSMUST00000193170	protein_coding	principal1	9	1	108461420	3044
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000223135	retained_intron		12	1	111539643	613
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000173711	retained_intron		3	-1	88925542	528
ENSMUSG00000027652	protein_coding	Ralgapb	ENSMUST00000143394	retained_intron		2	1	158409879	3842
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000221101	nonsense_mediated_decay		12	1	111542225	919
ENSMUSG00000027652	protein_coding	Ralgapb	ENSMUST00000173137	processed_transcript		2	1	158409882	1729
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000100214	protein_coding	principal1	2	1	30364296	3586
ENSMUSG00000027652	protein_coding	Ralgapb	ENSMUST00000109485	protein_coding	principal4	2	1	158409951	6709
ENSMUSG00000021282	protein_coding	Eif5	ENSMUST00000221243	retained_intron		12	1	111542831	622
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000127410	retained_intron		2	1	30367695	522
ENSMUSG00000027652	protein_coding	Ralgapb	ENSMUST00000156281	protein_coding		2	1	158410102	432
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000107491	protein_coding		3	-1	88949951	1375
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000116543	protein_coding		2	1	30368415	874
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000122091	protein_coding	principal2	9	-1	64173104	2957
ENSMUSG00000027652	protein_coding	Ralgapb	ENSMUST00000141497	protein_coding		2	1	158436554	7131
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000135841	retained_intron		2	1	30371282	520
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000174571	protein_coding		3	-1	88930985	718
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000125610	retained_intron		2	1	30378235	396
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000176848	retained_intron		9	-1	64144214	609
ENSMUSG00000027652	protein_coding	Ralgapb	ENSMUST00000150420	retained_intron		2	1	158465895	570
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000175864	protein_coding		2	1	30381713	385
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000173094	protein_coding		3	-1	88931018	796
ENSMUSG00000027652	protein_coding	Ralgapb	ENSMUST00000173458	processed_transcript		2	1	158477729	459
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000192020	protein_coding	principal2	1	-1	193201334	1854
ENSMUSG00000043342	protein_coding	Hoxd9	ENSMUST00000059272	protein_coding	principal1	2	1	74697727	2136
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000176299	protein_coding	alternative2	9	-1	64172879	1831
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000111668	protein_coding	alternative2	5	-1	122779382	4861
ENSMUSG00000026858	protein_coding	Miga2	ENSMUST00000176517	protein_coding		2	1	30381944	466
ENSMUSG00000027652	protein_coding	Ralgapb	ENSMUST00000046274	protein_coding	alternative1	2	1	158409853	8366
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000176794	protein_coding	alternative2	9	-1	64172894	1746
ENSMUSG00000032357	protein_coding	Tinag	ENSMUST00000184897	nonsense_mediated_decay		9	-1	77045749	1690
ENSMUSG00000081800	processed_pseudogene	Gm14200	ENSMUST00000122256	processed_pseudogene		2	-1	158468360	192
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000200109	protein_coding	principal3	5	-1	122779333	2751
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000173135	protein_coding	alternative2	3	-1	88951181	1409
ENSMUSG00000025925	protein_coding	Terf1	ENSMUST00000188371	protein_coding	principal1	1	1	15805646	2268
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000152824	nonsense_mediated_decay		9	-1	64150268	593
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000198029	protein_coding		5	-1	122753842	4765
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000143421	nonsense_mediated_decay		9	-1	64147376	368
ENSMUSG00000017679	protein_coding	Ttpal	ENSMUST00000109408	protein_coding	principal1	2	1	163602322	1999
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000197373	protein_coding		5	-1	122744092	685
ENSMUSG00000017679	protein_coding	Ttpal	ENSMUST00000152135	protein_coding		2	1	163602349	330
ENSMUSG00000052395	protein_coding	Rft1	ENSMUST00000064230	protein_coding	principal1	14	1	30654360	2387
ENSMUSG00000062170	protein_coding	Fmr1nb	ENSMUST00000071848	protein_coding	principal3	X	1	68761934	842
ENSMUSG00000025925	protein_coding	Terf1	ENSMUST00000186565	processed_transcript		1	1	15805657	968
ENSMUSG00000017679	protein_coding	Ttpal	ENSMUST00000144729	retained_intron		2	1	163602349	1624
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000174077	protein_coding		3	-1	88950298	831
ENSMUSG00000025925	protein_coding	Terf1	ENSMUST00000027057	protein_coding		1	1	15805664	1581
ENSMUSG00000017679	protein_coding	Ttpal	ENSMUST00000109405	nonsense_mediated_decay		2	1	163602351	4289
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000138075	retained_intron		9	-1	64155502	944
ENSMUSG00000027957	protein_coding	Slc35a3	ENSMUST00000029569	protein_coding	principal1	3	-1	116712650	5725
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000173021	protein_coding		3	-1	88951108	854
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000148428	retained_intron		9	-1	64155750	942
ENSMUSG00000017679	protein_coding	Ttpal	ENSMUST00000156839	protein_coding		2	1	163602563	709
ENSMUSG00000025925	protein_coding	Terf1	ENSMUST00000188684	retained_intron		1	1	15807641	2908
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000174402	protein_coding		3	-1	88950271	723
ENSMUSG00000038768	protein_coding	9130409I23Rik	ENSMUST00000036819	protein_coding	principal1	1	1	181051237	1898
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000177045	protein_coding		9	-1	64172913	1047
ENSMUSG00000062170	protein_coding	Fmr1nb	ENSMUST00000069731	protein_coding	alternative2	X	1	68761839	799
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000199435	retained_intron		3	1	145118588	3794
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000208464	retained_intron		7	-1	19604459	4545
ENSMUSG00000032357	protein_coding	Tinag	ENSMUST00000034911	protein_coding	principal1	9	-1	77045794	1726
ENSMUSG00000017679	protein_coding	Ttpal	ENSMUST00000132904	retained_intron		2	1	163611520	608
ENSMUSG00000027957	protein_coding	Slc35a3	ENSMUST00000120120	protein_coding	principal1	3	-1	116712231	1791
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000172942	protein_coding		3	-1	88949906	436
ENSMUSG00000110570	processed_pseudogene	Gm45778	ENSMUST00000211959	processed_pseudogene		8	1	83749504	153
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000208716	retained_intron		7	-1	19581682	642
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000176378	nonsense_mediated_decay		9	-1	64172906	508
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000174491	protein_coding		3	-1	88938521	625
ENSMUSG00000084251	processed_pseudogene	Gm12310	ENSMUST00000118013	processed_pseudogene		11	1	69950798	492
ENSMUSG00000104390	processed_pseudogene	Gm17967	ENSMUST00000195319	processed_pseudogene		1	-1	181053174	647
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000130127	protein_coding		9	-1	64172888	463
ENSMUSG00000027957	protein_coding	Slc35a3	ENSMUST00000196331	processed_transcript		3	-1	116676428	751
ENSMUSG00000098333	processed_pseudogene	Gm27158	ENSMUST00000183813	processed_pseudogene		9	1	76989782	238
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000188259	processed_transcript		3	-1	88951037	841
ENSMUSG00000062170	protein_coding	Fmr1nb	ENSMUST00000114647	protein_coding	alternative2	X	1	68761881	679
ENSMUSG00000027957	protein_coding	Slc35a3	ENSMUST00000153108	protein_coding		3	-1	116711842	815
ENSMUSG00000068921	protein_coding	Dap3	ENSMUST00000172790	processed_transcript		3	-1	88951109	388
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000194278	nonsense_mediated_decay		1	-1	193201547	2235
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000124301	nonsense_mediated_decay		9	-1	64172890	545
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000207253	retained_intron		7	-1	19588667	2018
ENSMUSG00000027957	protein_coding	Slc35a3	ENSMUST00000196335	protein_coding		3	-1	116712212	697
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000207907	nonsense_mediated_decay		7	-1	19604405	2431
ENSMUSG00000032400	protein_coding	Zwilch	ENSMUST00000151428	retained_intron		9	-1	64172903	638
ENSMUSG00000032340	protein_coding	Neo1	ENSMUST00000068664	protein_coding	principal2	9	-1	59036441	7379
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000043550	protein_coding	principal2	1	-1	193201547	2122
ENSMUSG00000098370	lincRNA	Gm19541	ENSMUST00000184488	lincRNA		9	1	77046682	2868
ENSMUSG00000017679	protein_coding	Ttpal	ENSMUST00000171696	protein_coding	principal1	2	1	163602314	4522
ENSMUSG00000052395	protein_coding	Rft1	ENSMUST00000228211	processed_transcript		14	1	30654375	541
ENSMUSG00000083046	processed_pseudogene	Gm14699	ENSMUST00000122340	processed_pseudogene		X	-1	68782867	228
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000199830	retained_intron		5	-1	122779399	3139
ENSMUSG00000115548	lincRNA	5430440P10Rik	ENSMUST00000226670	lincRNA		14	1	105427559	1016
ENSMUSG00000027957	protein_coding	Slc35a3	ENSMUST00000131082	retained_intron		3	-1	116712257	4424
ENSMUSG00000032340	protein_coding	Neo1	ENSMUST00000214547	protein_coding	alternative2	9	-1	59036425	5414
ENSMUSG00000099138	processed_pseudogene	Gm5746	ENSMUST00000183550	processed_pseudogene		9	1	77097191	2200
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000199179	nonsense_mediated_decay		5	-1	122763865	567
ENSMUSG00000027957	protein_coding	Slc35a3	ENSMUST00000169530	protein_coding		3	-1	116712831	657
ENSMUSG00000071748	protein_coding	Gm14698	ENSMUST00000096420	protein_coding	principal1	X	1	68821093	4226
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000199988	processed_transcript		5	-1	122779335	443
ENSMUSG00000032340	protein_coding	Neo1	ENSMUST00000215165	retained_intron		9	-1	58893934	795
ENSMUSG00000052395	protein_coding	Rft1	ENSMUST00000227338	processed_transcript		14	1	30654383	739
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000198257	protein_coding		5	-1	122779281	432
ENSMUSG00000052395	protein_coding	Rft1	ENSMUST00000228262	retained_intron		14	1	30654387	2002
ENSMUSG00000034891	protein_coding	Sncb	ENSMUST00000036825	protein_coding	principal1	13	-1	54766595	1351
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000207663	nonsense_mediated_decay		7	-1	19604452	2255
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000196742	protein_coding		5	-1	122779325	1084
ENSMUSG00000032719	protein_coding	Sbspon	ENSMUST00000040695	protein_coding	principal1	1	-1	15892722	2748
ENSMUSG00000052395	protein_coding	Rft1	ENSMUST00000226817	nonsense_mediated_decay		14	1	30654407	2234
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000160302	protein_coding		1	-1	193184818	675
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000198177	retained_intron		5	-1	122779409	2145
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000208068	nonsense_mediated_decay		7	-1	19604461	2151
ENSMUSG00000056815	protein_coding	Gm6812	ENSMUST00000074894	protein_coding	principal1	X	-1	68893053	525
ENSMUSG00000034891	protein_coding	Sncb	ENSMUST00000134110	protein_coding	principal1	13	-1	54766097	722
ENSMUSG00000030303	protein_coding	Far2	ENSMUST00000032443	protein_coding	principal1	6	1	148047259	3480
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000160332	retained_intron		1	-1	193197822	1590
ENSMUSG00000032340	protein_coding	Neo1	ENSMUST00000217545	retained_intron		9	-1	59036427	3639
ENSMUSG00000029471	protein_coding	Camkk2	ENSMUST00000199599	protein_coding		5	-1	122779315	446
ENSMUSG00000104379	TEC	Gm37509	ENSMUST00000194867	TEC		1	1	15853331	3169
ENSMUSG00000034891	protein_coding	Sncb	ENSMUST00000153829	retained_intron		13	-1	54763067	469
ENSMUSG00000052395	protein_coding	Rft1	ENSMUST00000228686	nonsense_mediated_decay		14	1	30654407	2347
ENSMUSG00000030303	protein_coding	Far2	ENSMUST00000203278	retained_intron		6	1	148047415	2158
ENSMUSG00000032340	protein_coding	Neo1	ENSMUST00000215026	retained_intron		9	-1	58982108	1865
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000162480	protein_coding		1	-1	193194300	447
ENSMUSG00000082228	processed_pseudogene	Gm8344	ENSMUST00000119813	processed_pseudogene		X	-1	68922012	856
ENSMUSG00000034891	protein_coding	Sncb	ENSMUST00000138067	retained_intron		13	-1	54766492	822
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000207447	retained_intron		7	-1	19585139	526
ENSMUSG00000052395	protein_coding	Rft1	ENSMUST00000226805	retained_intron		14	1	30682352	755
ENSMUSG00000032340	protein_coding	Neo1	ENSMUST00000216964	protein_coding		9	-1	58982229	1215
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000159666	protein_coding		1	-1	193187140	360
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000207524	nonsense_mediated_decay		7	-1	19604463	2162
ENSMUSG00000069785	protein_coding	Gm11444	ENSMUST00000146433	protein_coding	principal1	11	-1	85850333	575
ENSMUSG00000030303	protein_coding	Far2	ENSMUST00000111607	protein_coding		6	1	148047416	3395
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000207264	retained_intron		7	-1	19586691	489
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000161403	retained_intron		1	-1	193201455	3372
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000209059	retained_intron		7	-1	19585858	393
ENSMUSG00000111846	antisense	Gm47271	ENSMUST00000216941	antisense		9	1	58979251	531
ENSMUSG00000096939	processed_pseudogene	Gm8321	ENSMUST00000181691	processed_pseudogene		1	1	119157586	980
ENSMUSG00000061028	protein_coding	Clasrp	ENSMUST00000207325	retained_intron		7	-1	19595450	765
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000159805	retained_intron		1	-1	193201516	1289
ENSMUSG00000086777	antisense	Far2os2	ENSMUST00000149815	antisense		6	-1	148047339	980
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000161367	protein_coding	alternative2	1	-1	193197971	340
ENSMUSG00000089948	antisense	Far2os1	ENSMUST00000162391	antisense		6	-1	148067873	555
ENSMUSG00000028053	protein_coding	Ash1l	ENSMUST00000186583	protein_coding	principal1	3	1	88950622	11644
ENSMUSG00000112546	processed_pseudogene	Gm6992	ENSMUST00000217973	processed_pseudogene		12	1	31018218	1607
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000161145	processed_transcript		1	-1	193201498	496
ENSMUSG00000100767	processed_pseudogene	Gm3508	ENSMUST00000186012	processed_pseudogene		1	-1	119242753	792
ENSMUSG00000084823	lincRNA	Gm17216	ENSMUST00000130872	lincRNA		6	-1	148214573	728
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000161151	processed_transcript		1	-1	193201502	706
ENSMUSG00000112890	processed_pseudogene	Gm18502	ENSMUST00000218679	processed_pseudogene		12	1	31030857	199
ENSMUSG00000037318	protein_coding	Traf3ip3	ENSMUST00000162905	processed_transcript		1	-1	193201703	373
ENSMUSG00000028053	protein_coding	Ash1l	ENSMUST00000198846	retained_intron		3	1	89023183	1885
ENSMUSG00000028053	protein_coding	Ash1l	ENSMUST00000189824	retained_intron		3	1	89052802	1788
ENSMUSG00000042918	protein_coding	Mamstr	ENSMUST00000210648	retained_intron		7	1	45639977	343
ENSMUSG00000075090	protein_coding	Olfr1234	ENSMUST00000137692	protein_coding	principal1	2	-1	89364865	3827
ENSMUSG00000028053	protein_coding	Ash1l	ENSMUST00000090933	protein_coding	principal1	3	1	88965812	11268
ENSMUSG00000058794	protein_coding	Nfe2	ENSMUST00000075192	protein_coding	principal1	15	-1	103255439	1697
ENSMUSG00000027566	protein_coding	Psma7	ENSMUST00000126021	retained_intron		2	-1	180042395	1515
ENSMUSG00000075090	protein_coding	Olfr1234	ENSMUST00000111543	protein_coding	principal1	2	-1	89364861	1386
ENSMUSG00000058794	protein_coding	Nfe2	ENSMUST00000133600	protein_coding		15	-1	103251465	1605
ENSMUSG00000058794	protein_coding	Nfe2	ENSMUST00000156927	protein_coding	principal1	15	-1	103251516	1608
ENSMUSG00000075090	protein_coding	Olfr1234	ENSMUST00000099783	protein_coding	principal1	2	-1	89363427	945
ENSMUSG00000054509	protein_coding	Parp4	ENSMUST00000161553	protein_coding	principal1	14	1	56575619	6387
ENSMUSG00000110972	TEC	5830462O15Rik	ENSMUST00000214603	TEC		9	-1	44180701	1655
ENSMUSG00000058794	protein_coding	Nfe2	ENSMUST00000149111	protein_coding	principal1	15	-1	103251676	1878
ENSMUSG00000042918	protein_coding	Mamstr	ENSMUST00000210213	retained_intron		7	1	45639977	2486
ENSMUSG00000110966	processed_pseudogene	Gm47255	ENSMUST00000214044	processed_pseudogene		9	1	44180675	487
ENSMUSG00000054509	protein_coding	Parp4	ENSMUST00000162312	retained_intron		14	1	56655335	835
ENSMUSG00000058794	protein_coding	Nfe2	ENSMUST00000134554	protein_coding	principal1	15	-1	103251515	1761
ENSMUSG00000026638	protein_coding	Irf6	ENSMUST00000076521	protein_coding	principal1	1	1	193153111	4113
ENSMUSG00000058794	protein_coding	Nfe2	ENSMUST00000134193	protein_coding		15	-1	103253152	774
ENSMUSG00000030560	protein_coding	Ctsc	ENSMUST00000032779	protein_coding	principal1	7	1	88278085	2493
ENSMUSG00000058794	protein_coding	Nfe2	ENSMUST00000131364	protein_coding		15	-1	103254062	708
ENSMUSG00000090038	antisense	Gm16573	ENSMUST00000160334	antisense		14	-1	56620497	801
ENSMUSG00000033501	protein_coding	Crygs	ENSMUST00000040592	protein_coding	principal1	16	-1	22811577	875
ENSMUSG00000090038	antisense	Gm16573	ENSMUST00000162231	antisense		14	-1	56620513	807
ENSMUSG00000058794	protein_coding	Nfe2	ENSMUST00000132836	protein_coding		15	-1	103251687	607
ENSMUSG00000026638	protein_coding	Irf6	ENSMUST00000138826	retained_intron		1	1	193153154	1760
ENSMUSG00000090038	antisense	Gm16573	ENSMUST00000161382	antisense		14	-1	56620513	285
ENSMUSG00000026638	protein_coding	Irf6	ENSMUST00000140066	retained_intron		1	1	193156669	2509
ENSMUSG00000058794	protein_coding	Nfe2	ENSMUST00000154510	protein_coding		15	-1	103252810	784
ENSMUSG00000030560	protein_coding	Ctsc	ENSMUST00000131108	protein_coding		7	1	88278134	3220
ENSMUSG00000103328	lincRNA	Gm37406	ENSMUST00000192478	lincRNA		1	1	181062070	500
ENSMUSG00000026638	protein_coding	Irf6	ENSMUST00000193772	retained_intron		1	1	193168503	341
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000185852	protein_coding	principal3	13	-1	92354995	3946
ENSMUSG00000084295	unprocessed_pseudogene	Olfr1235-ps1	ENSMUST00000117898	unprocessed_pseudogene		2	-1	89390230	314
ENSMUSG00000030560	protein_coding	Ctsc	ENSMUST00000128791	protein_coding		7	1	88278134	831
ENSMUSG00000042116	protein_coding	Vwa1	ENSMUST00000042196	protein_coding	principal1	4	-1	155774698	3623
ENSMUSG00000058794	protein_coding	Nfe2	ENSMUST00000132438	protein_coding		15	-1	103258403	362
ENSMUSG00000030560	protein_coding	Ctsc	ENSMUST00000139159	retained_intron		7	1	88278138	634
ENSMUSG00000036158	protein_coding	Prickle1	ENSMUST00000109255	protein_coding	principal1	15	-1	93519523	4144
ENSMUSG00000054514	antisense	Atad3aos	ENSMUST00000174185	antisense		4	1	155761178	482
ENSMUSG00000030560	protein_coding	Ctsc	ENSMUST00000152834	retained_intron		7	1	88296852	667
ENSMUSG00000079144	protein_coding	A130010J15Rik	ENSMUST00000160822	protein_coding	principal1	1	1	193168046	3793
ENSMUSG00000102152	TEC	Gm37475	ENSMUST00000193107	TEC		9	1	108469346	1015
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000191242	processed_transcript		13	-1	92241130	1363
ENSMUSG00000054514	antisense	Atad3aos	ENSMUST00000067628	antisense		4	1	155761192	971
ENSMUSG00000079144	protein_coding	A130010J15Rik	ENSMUST00000161235	protein_coding	principal1	1	1	193173468	2097
ENSMUSG00000036158	protein_coding	Prickle1	ENSMUST00000048982	protein_coding	principal1	15	-1	93595891	4085
ENSMUSG00000054514	antisense	Atad3aos	ENSMUST00000155010	antisense		4	1	155761210	257
ENSMUSG00000079144	protein_coding	A130010J15Rik	ENSMUST00000160077	protein_coding		1	1	193173492	652
ENSMUSG00000054514	antisense	Atad3aos	ENSMUST00000150777	antisense		4	1	155761221	650
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000191304	retained_intron		13	-1	92266072	1796
ENSMUSG00000073982	protein_coding	Rhog	ENSMUST00000106923	protein_coding	principal1	7	-1	102250088	1321
ENSMUSG00000115993	processed_pseudogene	Zfp42-ps1	ENSMUST00000231103	processed_pseudogene		15	-1	93679649	490
ENSMUSG00000079144	protein_coding	A130010J15Rik	ENSMUST00000192189	protein_coding		1	1	193173580	379
ENSMUSG00000073982	protein_coding	Rhog	ENSMUST00000098230	protein_coding	principal1	7	-1	102250123	1269
ENSMUSG00000099860	lincRNA	Gm29456	ENSMUST00000189894	lincRNA		1	-1	119326833	768
ENSMUSG00000117321	processed_pseudogene	Gm49927	ENSMUST00000233843	processed_pseudogene		17	1	66094933	238
ENSMUSG00000073982	protein_coding	Rhog	ENSMUST00000209968	protein_coding		7	-1	102256054	383
ENSMUSG00000101179	lincRNA	Gm29455	ENSMUST00000186697	lincRNA		1	1	119329200	1369
ENSMUSG00000079144	protein_coding	A130010J15Rik	ENSMUST00000110831	protein_coding	principal1	1	1	193173580	2257
ENSMUSG00000101179	lincRNA	Gm29455	ENSMUST00000186504	lincRNA		1	1	119329242	2659
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000191550	nonsense_mediated_decay		13	-1	92354999	4254
ENSMUSG00000042918	protein_coding	Mamstr	ENSMUST00000148532	protein_coding	principal1	7	1	45639993	1606
ENSMUSG00000027566	protein_coding	Psma7	ENSMUST00000129529	protein_coding		2	-1	180042410	1157
ENSMUSG00000116190	lincRNA	Gm41386	ENSMUST00000229650	lincRNA		15	-1	93712769	464
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000186392	retained_intron		13	-1	92250073	1555
ENSMUSG00000079144	protein_coding	A130010J15Rik	ENSMUST00000191613	protein_coding		1	1	193173586	493
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000022220	protein_coding	alternative2	13	-1	92355003	3937
ENSMUSG00000042918	protein_coding	Mamstr	ENSMUST00000210988	retained_intron		7	1	45641480	4534
ENSMUSG00000116237	lincRNA	Gm30339	ENSMUST00000231054	lincRNA		15	1	93734413	2538
ENSMUSG00000037035	protein_coding	Inhbb	ENSMUST00000038765	protein_coding	principal1	1	-1	119422248	4255
ENSMUSG00000068428	protein_coding	Gmnc	ENSMUST00000231417	nonsense_mediated_decay		16	-1	26965606	1243
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000190761	protein_coding		13	-1	92235599	633
ENSMUSG00000042918	protein_coding	Mamstr	ENSMUST00000210957	retained_intron		7	1	45641776	2491
ENSMUSG00000079144	protein_coding	A130010J15Rik	ENSMUST00000193307	protein_coding		1	1	193173744	705
ENSMUSG00000116493	lincRNA	Gm49445	ENSMUST00000229905	lincRNA		15	1	93825038	470
ENSMUSG00000060992	protein_coding	Copz1	ENSMUST00000229549	nonsense_mediated_decay		15	1	103272714	874
ENSMUSG00000042918	protein_coding	Mamstr	ENSMUST00000210169	protein_coding		7	1	45644384	536
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000187874	nonsense_mediated_decay		13	-1	92354985	534
ENSMUSG00000060992	protein_coding	Copz1	ENSMUST00000230417	retained_intron		15	1	103272901	1298
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000190462	retained_intron		13	-1	92309457	1961
ENSMUSG00000111517	protein_coding	Olfr1238	ENSMUST00000217226	protein_coding	principal1	2	-1	89409599	5241
ENSMUSG00000027566	protein_coding	Psma7	ENSMUST00000029082	protein_coding	principal1	2	-1	180042433	914
ENSMUSG00000116360	lincRNA	9430014N10Rik	ENSMUST00000230109	lincRNA		15	-1	93927111	1131
ENSMUSG00000079144	protein_coding	A130010J15Rik	ENSMUST00000178744	protein_coding	principal1	1	1	193173577	3782
ENSMUSG00000068428	protein_coding	Gmnc	ENSMUST00000089832	protein_coding		16	-1	26989974	4084
ENSMUSG00000111517	protein_coding	Olfr1238	ENSMUST00000217237	protein_coding	principal1	2	-1	89409676	5761
ENSMUSG00000027566	protein_coding	Psma7	ENSMUST00000135650	retained_intron		2	-1	180037488	288
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000191509	nonsense_mediated_decay		13	-1	92354996	4137
ENSMUSG00000115965	lincRNA	Gm30564	ENSMUST00000229885	lincRNA		15	-1	93964708	2063
ENSMUSG00000027566	protein_coding	Psma7	ENSMUST00000142042	retained_intron		2	-1	180038821	651
ENSMUSG00000111517	protein_coding	Olfr1238	ENSMUST00000099781	protein_coding	principal1	2	-1	89407078	949
ENSMUSG00000097543	lincRNA	Gm805	ENSMUST00000181667	lincRNA		12	1	86169341	3160
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000189376	retained_intron		13	-1	92345378	625
ENSMUSG00000027566	protein_coding	Psma7	ENSMUST00000132431	retained_intron		2	-1	180040145	1037
ENSMUSG00000090080	antisense	Gm15872	ENSMUST00000162454	antisense		1	1	193187274	1108
ENSMUSG00000027566	protein_coding	Psma7	ENSMUST00000155898	processed_transcript		2	-1	180042385	292
ENSMUSG00000111302	unprocessed_pseudogene	AL929555.1	ENSMUST00000215283	unprocessed_pseudogene		2	-1	89402363	509
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000187831	processed_transcript		13	-1	92354515	1753
ENSMUSG00000068428	protein_coding	Gmnc	ENSMUST00000231969	protein_coding	principal1	16	-1	26968245	2553
ENSMUSG00000100652	processed_pseudogene	Gm7634	ENSMUST00000185778	processed_pseudogene		1	1	16053335	553
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000186878	retained_intron		13	-1	92354953	1818
ENSMUSG00000068428	protein_coding	Gmnc	ENSMUST00000231299	protein_coding		16	-1	26991652	2284
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000190393	nonsense_mediated_decay		13	-1	92354985	1818
ENSMUSG00000014850	protein_coding	Msh3	ENSMUST00000187424	protein_coding		13	-1	92354985	666
ENSMUSG00000053730	protein_coding	Tmem39b	ENSMUST00000125445	nonsense_mediated_decay		4	-1	129696796	1851
ENSMUSG00000100622	protein_coding	Gm20379	ENSMUST00000188317	protein_coding	principal1	13	1	92305980	1204
ENSMUSG00000021707	protein_coding	Dhfr	ENSMUST00000022218	protein_coding	principal1	13	1	92354726	5347
ENSMUSG00000053730	protein_coding	Tmem39b	ENSMUST00000102588	protein_coding	principal1	4	-1	129696838	1810
ENSMUSG00000062515	protein_coding	Fabp4	ENSMUST00000029041	protein_coding	principal1	3	-1	10208576	896
ENSMUSG00000053730	protein_coding	Tmem39b	ENSMUST00000154747	retained_intron		4	-1	129678890	529
ENSMUSG00000098668	processed_pseudogene	Gm27210	ENSMUST00000184263	processed_pseudogene		9	-1	77295239	402
ENSMUSG00000062515	protein_coding	Fabp4	ENSMUST00000191757	retained_intron		3	-1	10208558	4231
ENSMUSG00000053730	protein_coding	Tmem39b	ENSMUST00000137640	protein_coding		4	-1	129696620	662
ENSMUSG00000102705	TEC	4632432E15Rik	ENSMUST00000191824	TEC		3	-1	10223433	2439
ENSMUSG00000053730	protein_coding	Tmem39b	ENSMUST00000147668	nonsense_mediated_decay		4	-1	129696744	697
ENSMUSG00000060275	protein_coding	Nrg2	ENSMUST00000115713	protein_coding	principal2	18	-1	36197380	3056
ENSMUSG00000104434	processed_pseudogene	Gm37421	ENSMUST00000193088	processed_pseudogene		3	1	10232180	132
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000183636	retained_intron		9	-1	77138702	666
ENSMUSG00000060275	protein_coding	Nrg2	ENSMUST00000239409	protein_coding	alternative2	18	-1	36068625	2017
ENSMUSG00000102834	TEC	1700029B24Rik	ENSMUST00000194040	TEC		3	1	10241812	497
ENSMUSG00000060992	protein_coding	Copz1	ENSMUST00000100162	protein_coding	principal1	15	1	103272910	1676
ENSMUSG00000060275	protein_coding	Nrg2	ENSMUST00000115712	protein_coding		18	-1	36031941	630
ENSMUSG00000060992	protein_coding	Copz1	ENSMUST00000230893	protein_coding		15	1	103272912	2438
ENSMUSG00000060275	protein_coding	Nrg2	ENSMUST00000237681	nonsense_mediated_decay		18	-1	36052884	453
ENSMUSG00000060275	protein_coding	Nrg2	ENSMUST00000225173	protein_coding		18	-1	36045932	328
ENSMUSG00000027589	protein_coding	Pcmtd2	ENSMUST00000029116	protein_coding	principal1	2	1	181837854	3569
ENSMUSG00000060275	protein_coding	Nrg2	ENSMUST00000115705	processed_transcript		18	-1	36197232	899
ENSMUSG00000089705	processed_pseudogene	Gm15970	ENSMUST00000160623	processed_pseudogene		16	-1	27343944	834
ENSMUSG00000027589	protein_coding	Pcmtd2	ENSMUST00000108754	protein_coding		2	1	181837913	3499
ENSMUSG00000117852	antisense	4930471G03Rik	ENSMUST00000237992	antisense		18	1	36105651	788
ENSMUSG00000116530	antisense	Gm32312	ENSMUST00000232586	antisense		16	-1	27326641	2187
ENSMUSG00000117852	antisense	4930471G03Rik	ENSMUST00000235617	antisense		18	1	36105651	788
ENSMUSG00000027589	protein_coding	Pcmtd2	ENSMUST00000139434	protein_coding		2	1	181840833	1084
ENSMUSG00000027589	protein_coding	Pcmtd2	ENSMUST00000155970	retained_intron		2	1	181842454	553
ENSMUSG00000117852	antisense	4930471G03Rik	ENSMUST00000235667	antisense		18	1	36106194	701
ENSMUSG00000027589	protein_coding	Pcmtd2	ENSMUST00000124346	protein_coding		2	1	181844454	746
ENSMUSG00000102322	TEC	4930566N20Rik	ENSMUST00000195173	TEC		3	-1	157208860	1199
ENSMUSG00000086708	antisense	Gm15577	ENSMUST00000144350	antisense		3	-1	156920780	2293
ENSMUSG00000027589	protein_coding	Pcmtd2	ENSMUST00000145475	processed_transcript		2	1	181850958	854
ENSMUSG00000105290	TEC	Gm43528	ENSMUST00000199492	TEC		3	1	156737540	1674
ENSMUSG00000052276	protein_coding	Ostn	ENSMUST00000066852	protein_coding	principal1	16	1	27307489	1423
ENSMUSG00000027589	protein_coding	Pcmtd2	ENSMUST00000122811	processed_transcript		2	1	181850966	702
ENSMUSG00000027589	protein_coding	Pcmtd2	ENSMUST00000142989	processed_transcript		2	1	181851000	639
ENSMUSG00000083122	unprocessed_pseudogene	Gm15578	ENSMUST00000117320	unprocessed_pseudogene		3	1	156816037	475
ENSMUSG00000027589	protein_coding	Pcmtd2	ENSMUST00000137893	retained_intron		2	1	181851563	715
ENSMUSG00000024099	protein_coding	Ndufv2	ENSMUST00000143987	protein_coding	principal1	17	-1	66101559	1697
ENSMUSG00000106385	TEC	Gm42943	ENSMUST00000199676	TEC		3	1	156731098	3242
ENSMUSG00000036136	protein_coding	Fam110c	ENSMUST00000041133	protein_coding	principal1	12	1	31073861	3088
ENSMUSG00000104696	TEC	Gm42946	ENSMUST00000196108	TEC		3	1	156646320	2570
ENSMUSG00000105803	TEC	Gm43526	ENSMUST00000196666	TEC		3	1	157071744	1565
ENSMUSG00000019232	protein_coding	Etnppl	ENSMUST00000166187	protein_coding	principal1	3	1	130617448	1712
ENSMUSG00000022116	processed_transcript	4930449E01Rik	ENSMUST00000022711	lincRNA		14	1	105498788	595
ENSMUSG00000052911	protein_coding	Lamb2	ENSMUST00000194147	protein_coding		9	1	108479736	332
ENSMUSG00000022116	processed_transcript	4930449E01Rik	ENSMUST00000193202	TEC		14	1	105500936	360
ENSMUSG00000022116	processed_transcript	4930449E01Rik	ENSMUST00000188698	lincRNA		14	1	105503576	532
ENSMUSG00000042002	protein_coding	Foxn4	ENSMUST00000044790	protein_coding	principal1	5	-1	114273807	3016
ENSMUSG00000042002	protein_coding	Foxn4	ENSMUST00000129530	nonsense_mediated_decay		5	-1	114263120	1222
ENSMUSG00000115386	lincRNA	Gm35909	ENSMUST00000226350	lincRNA		14	1	105518096	2959
ENSMUSG00000019232	protein_coding	Etnppl	ENSMUST00000072271	protein_coding	principal1	3	1	130617569	4468
ENSMUSG00000042002	protein_coding	Foxn4	ENSMUST00000144050	protein_coding		5	-1	114273702	672
ENSMUSG00000024099	protein_coding	Ndufv2	ENSMUST00000024909	protein_coding		17	-1	66101495	927
ENSMUSG00000019232	protein_coding	Etnppl	ENSMUST00000199940	retained_intron		3	1	130617572	4057
ENSMUSG00000042002	protein_coding	Foxn4	ENSMUST00000147953	retained_intron		5	-1	114273749	600
ENSMUSG00000024099	protein_coding	Ndufv2	ENSMUST00000138847	protein_coding		17	-1	66092213	699
ENSMUSG00000116368	unprocessed_pseudogene	Cyp2d33-ps	ENSMUST00000229418	unprocessed_pseudogene		15	1	82562197	883
ENSMUSG00000019232	protein_coding	Etnppl	ENSMUST00000172432	retained_intron		3	1	130617599	1287
ENSMUSG00000116319	TEC	Gm49429	ENSMUST00000229062	TEC		15	-1	82565311	1876
ENSMUSG00000019232	protein_coding	Etnppl	ENSMUST00000163620	protein_coding		3	1	130617693	1482
ENSMUSG00000101840	antisense	Gm28294	ENSMUST00000191154	antisense		1	1	75252322	386
ENSMUSG00000024099	protein_coding	Ndufv2	ENSMUST00000147484	protein_coding		17	-1	66101509	488
ENSMUSG00000102219	unprocessed_pseudogene	Gm6606	ENSMUST00000193613	unprocessed_pseudogene		1	1	181067596	947
ENSMUSG00000000094	protein_coding	Tbx4	ENSMUST00000108047	protein_coding	principal1	11	1	85886422	3153
ENSMUSG00000019232	protein_coding	Etnppl	ENSMUST00000170664	protein_coding		3	1	130626520	488
ENSMUSG00000056076	protein_coding	Eif3b	ENSMUST00000100507	protein_coding	principal1	5	1	140419328	2945
ENSMUSG00000110165	transcribed_processed_pseudogene	Gm4032	ENSMUST00000211600	processed_transcript		14	-1	56668124	531
ENSMUSG00000001507	protein_coding	Itga3	ENSMUST00000107739	protein_coding	alternative2	11	-1	95069198	4636
ENSMUSG00000110165	transcribed_processed_pseudogene	Gm4032	ENSMUST00000210886	transcribed_processed_pseudogene		14	-1	56666207	487
ENSMUSG00000056076	protein_coding	Eif3b	ENSMUST00000197632	retained_intron		5	1	140427090	600
ENSMUSG00000110165	transcribed_processed_pseudogene	Gm4032	ENSMUST00000210920	processed_transcript		14	-1	56668047	342
ENSMUSG00000056076	protein_coding	Eif3b	ENSMUST00000199377	protein_coding		5	1	140439942	596
ENSMUSG00000000094	protein_coding	Tbx4	ENSMUST00000108045	protein_coding		11	1	85896765	2959
ENSMUSG00000072902	antisense	Gm10435	ENSMUST00000162526	antisense		11	1	59002910	2878
ENSMUSG00000072902	antisense	Gm10435	ENSMUST00000101162	antisense		11	1	59002910	2878
ENSMUSG00000079513	protein_coding	4932429P05Rik	ENSMUST00000113958	protein_coding	principal1	X	1	89752268	3093
ENSMUSG00000116792	lincRNA	D16Ertd519e	ENSMUST00000232518	lincRNA		16	1	70616425	610
ENSMUSG00000116792	lincRNA	D16Ertd519e	ENSMUST00000231858	lincRNA		16	1	70618039	587
ENSMUSG00000000094	protein_coding	Tbx4	ENSMUST00000000096	protein_coding	principal1	11	1	85890063	3011
ENSMUSG00000116758	processed_pseudogene	Gm19291	ENSMUST00000232593	processed_pseudogene		16	1	70665306	379
ENSMUSG00000083253	processed_pseudogene	Gm7108	ENSMUST00000118038	processed_pseudogene		X	-1	89806126	3407
ENSMUSG00000044405	protein_coding	Adig	ENSMUST00000059889	protein_coding	principal1	2	1	158502612	632
ENSMUSG00000109675	transcribed_unprocessed_pseudogene	Nxpe1-ps	ENSMUST00000210160	processed_transcript		9	1	48418321	956
ENSMUSG00000097938	processed_pseudogene	Gm26933	ENSMUST00000182320	processed_pseudogene		15	-1	54035982	827
ENSMUSG00000044405	protein_coding	Adig	ENSMUST00000109484	protein_coding		2	1	158502653	488
ENSMUSG00000001507	protein_coding	Itga3	ENSMUST00000001548	protein_coding	principal3	11	-1	95076714	4861
ENSMUSG00000109675	transcribed_unprocessed_pseudogene	Nxpe1-ps	ENSMUST00000209981	transcribed_unprocessed_pseudogene		9	1	48420008	1611
ENSMUSG00000044405	protein_coding	Adig	ENSMUST00000148187	processed_transcript		2	1	158502739	323
ENSMUSG00000109675	transcribed_unprocessed_pseudogene	Nxpe1-ps	ENSMUST00000210879	processed_transcript		9	1	48423810	822
ENSMUSG00000001507	protein_coding	Itga3	ENSMUST00000120375	protein_coding	alternative2	11	-1	95076801	4697
ENSMUSG00000052911	protein_coding	Lamb2	ENSMUST00000065014	protein_coding	principal1	9	1	108479857	5629
ENSMUSG00000073680	protein_coding	Tmem88b	ENSMUST00000097742	protein_coding	principal1	4	-1	155785874	3471
ENSMUSG00000027316	protein_coding	Gfra4	ENSMUST00000110240	protein_coding	alternative2	2	-1	131043088	1426
ENSMUSG00000100506	processed_pseudogene	Nanog-ps1	ENSMUST00000188967	processed_pseudogene		X	-1	89883638	250
ENSMUSG00000040037	protein_coding	Negr1	ENSMUST00000074015	protein_coding	principal1	3	1	156561794	4983
ENSMUSG00000052911	protein_coding	Lamb2	ENSMUST00000195483	protein_coding		9	1	108479872	473
ENSMUSG00000001507	protein_coding	Itga3	ENSMUST00000141693	retained_intron		11	-1	95056195	826
ENSMUSG00000116742	processed_pseudogene	Gm49665	ENSMUST00000232475	processed_pseudogene		16	-1	70747722	244
ENSMUSG00000027316	protein_coding	Gfra4	ENSMUST00000156509	retained_intron		2	-1	131041457	1125
ENSMUSG00000052911	protein_coding	Lamb2	ENSMUST00000195058	protein_coding		9	1	108479878	345
ENSMUSG00000040037	protein_coding	Negr1	ENSMUST00000041425	protein_coding		3	1	156561959	2095
ENSMUSG00000001507	protein_coding	Itga3	ENSMUST00000140342	retained_intron		11	-1	95062271	722
ENSMUSG00000027316	protein_coding	Gfra4	ENSMUST00000136569	retained_intron		2	-1	131041511	1791
ENSMUSG00000001507	protein_coding	Itga3	ENSMUST00000145671	protein_coding		11	-1	95076797	549
ENSMUSG00000040037	protein_coding	Negr1	ENSMUST00000106065	protein_coding		3	1	156561969	1953
ENSMUSG00000035387	protein_coding	4930415L06Rik	ENSMUST00000088146	protein_coding	principal1	X	-1	89932852	2617
ENSMUSG00000040037	protein_coding	Negr1	ENSMUST00000197246	retained_intron		3	1	156562146	3988
ENSMUSG00000040037	protein_coding	Negr1	ENSMUST00000175773	protein_coding		3	1	156562150	412
ENSMUSG00000083403	unprocessed_pseudogene	Gm13041	ENSMUST00000122323	unprocessed_pseudogene		4	1	143499435	1524
ENSMUSG00000106018	TEC	Gm43527	ENSMUST00000198749	TEC		3	1	157000417	3178
ENSMUSG00000052911	protein_coding	Lamb2	ENSMUST00000191864	retained_intron		9	1	108479881	221
ENSMUSG00000067276	protein_coding	Capn6	ENSMUST00000087316	protein_coding	principal1	X	-1	143827414	3561
ENSMUSG00000052911	protein_coding	Lamb2	ENSMUST00000193301	retained_intron		9	1	108487818	683
ENSMUSG00000106047	TEC	Gm42942	ENSMUST00000196086	TEC		3	1	156703900	1328
ENSMUSG00000103178	processed_pseudogene	Fgfr3-ps	ENSMUST00000195511	processed_pseudogene		1	1	181091129	1137
ENSMUSG00000063543	processed_pseudogene	Gm5616	ENSMUST00000165252	processed_pseudogene		9	1	48450400	384
ENSMUSG00000101437	processed_pseudogene	Gm29454	ENSMUST00000190805	processed_pseudogene		1	1	119499477	393
ENSMUSG00000040867	protein_coding	Begain	ENSMUST00000209829	protein_coding	alternative2	12	-1	109059427	3272
ENSMUSG00000052911	protein_coding	Lamb2	ENSMUST00000194421	retained_intron		9	1	108488877	578
ENSMUSG00000067276	protein_coding	Capn6	ENSMUST00000151154	retained_intron		X	-1	143827332	4539
ENSMUSG00000083508	processed_pseudogene	Gm6027	ENSMUST00000121467	processed_pseudogene		X	1	90063063	756
ENSMUSG00000095409	protein_coding	Gm13043	ENSMUST00000178489	protein_coding	principal1	4	1	143511343	2055
ENSMUSG00000040867	protein_coding	Begain	ENSMUST00000190647	protein_coding	principal2	12	-1	109068217	2707
ENSMUSG00000115914	unprocessed_pseudogene	Cyp2d34-ps	ENSMUST00000230103	unprocessed_pseudogene		15	-1	82612915	1513
ENSMUSG00000116308	antisense	Gm49482	ENSMUST00000231068	antisense		15	1	103301065	726
ENSMUSG00000040867	protein_coding	Begain	ENSMUST00000239108	protein_coding	alternative2	12	-1	109053775	2117
ENSMUSG00000100642	protein_coding	Gm28230	ENSMUST00000053932	nonsense_mediated_decay	principal1	2	1	74726728	3527
ENSMUSG00000027316	protein_coding	Gfra4	ENSMUST00000028787	protein_coding	principal3	2	-1	131042682	909
ENSMUSG00000040867	protein_coding	Begain	ENSMUST00000238841	protein_coding	alternative2	12	-1	109054288	1943
ENSMUSG00000063234	protein_coding	Gpr84	ENSMUST00000079824	protein_coding	principal1	15	-1	103310612	1725
ENSMUSG00000027316	protein_coding	Gfra4	ENSMUST00000110239	protein_coding	alternative2	2	-1	131042682	810
ENSMUSG00000052371	antisense	Hoxd3os1	ENSMUST00000132326	antisense		2	-1	74712054	460
ENSMUSG00000040867	protein_coding	Begain	ENSMUST00000187230	retained_intron		12	-1	109037087	894
ENSMUSG00000027316	protein_coding	Gfra4	ENSMUST00000066958	protein_coding	alternative2	2	-1	131043088	783
ENSMUSG00000004451	protein_coding	Ralb	ENSMUST00000004565	protein_coding	principal1	1	-1	119504794	2289
ENSMUSG00000040867	protein_coding	Begain	ENSMUST00000185745	protein_coding		12	-1	109053581	584
ENSMUSG00000052371	antisense	Hoxd3os1	ENSMUST00000156342	antisense		2	-1	74712526	796
ENSMUSG00000004451	protein_coding	Ralb	ENSMUST00000142945	protein_coding		1	-1	119478079	623
ENSMUSG00000027316	protein_coding	Gfra4	ENSMUST00000110234	protein_coding		2	-1	131042682	600
ENSMUSG00000052371	antisense	Hoxd3os1	ENSMUST00000145799	antisense		2	-1	74715996	511
ENSMUSG00000027316	protein_coding	Gfra4	ENSMUST00000110235	protein_coding		2	-1	131043088	573
ENSMUSG00000004451	protein_coding	Ralb	ENSMUST00000156213	retained_intron		1	-1	119504794	2742
ENSMUSG00000052371	antisense	Hoxd3os1	ENSMUST00000139005	antisense		2	-1	74716130	1701
ENSMUSG00000064263	lincRNA	Platr26	ENSMUST00000079720	lincRNA		2	1	71719417	641
ENSMUSG00000083140	processed_pseudogene	Gm5073	ENSMUST00000118222	processed_pseudogene		X	1	17626257	820
ENSMUSG00000115149	processed_transcript	9330188P03Rik	ENSMUST00000228796	lincRNA		14	1	105589476	918
ENSMUSG00000116800	lincRNA	Gm29823	ENSMUST00000232603	lincRNA		16	1	70954288	759
ENSMUSG00000115149	processed_transcript	9330188P03Rik	ENSMUST00000227407	lincRNA		14	1	105589491	668
ENSMUSG00000087570	lincRNA	Gm13647	ENSMUST00000154654	lincRNA		2	1	71737815	622
ENSMUSG00000115149	processed_transcript	9330188P03Rik	ENSMUST00000228670	lincRNA		14	1	105589549	2472
ENSMUSG00000070616	protein_coding	Gm13040	ENSMUST00000094521	protein_coding	alternative2	4	1	143539672	1586
ENSMUSG00000046032	protein_coding	Snx12	ENSMUST00000156473	protein_coding		X	-1	101222553	1114
ENSMUSG00000026516	protein_coding	Nvl	ENSMUST00000027797	protein_coding	principal1	1	-1	181144204	9392
ENSMUSG00000028544	protein_coding	Slc5a9	ENSMUST00000102721	protein_coding	principal1	4	-1	111902918	4484
ENSMUSG00000115149	processed_transcript	9330188P03Rik	ENSMUST00000227476	lincRNA		14	1	105589627	803
ENSMUSG00000070616	protein_coding	Gm13040	ENSMUST00000169056	protein_coding	principal2	4	1	143535954	2104
ENSMUSG00000078487	protein_coding	Ankrd65	ENSMUST00000105593	protein_coding	principal5	4	1	155791172	902
ENSMUSG00000115149	processed_transcript	9330188P03Rik	ENSMUST00000226150	lincRNA		14	1	105589627	655
ENSMUSG00000079277	protein_coding	Hoxd3	ENSMUST00000111983	protein_coding	principal1	2	1	74711927	2968
ENSMUSG00000026516	protein_coding	Nvl	ENSMUST00000191721	processed_transcript		1	-1	181093768	603
ENSMUSG00000115149	processed_transcript	9330188P03Rik	ENSMUST00000228136	lincRNA		14	1	105589627	982
ENSMUSG00000028544	protein_coding	Slc5a9	ENSMUST00000102719	protein_coding	principal1	4	-1	111902754	2460
ENSMUSG00000078487	protein_coding	Ankrd65	ENSMUST00000165000	protein_coding	alternative2	4	1	155790439	1140
ENSMUSG00000026516	protein_coding	Nvl	ENSMUST00000195209	retained_intron		1	-1	181095525	1193
ENSMUSG00000115149	processed_transcript	9330188P03Rik	ENSMUST00000227651	retained_intron		14	1	105590057	3388
ENSMUSG00000079277	protein_coding	Hoxd3	ENSMUST00000144544	protein_coding		2	1	74732913	415
ENSMUSG00000028544	protein_coding	Slc5a9	ENSMUST00000102720	protein_coding	principal1	4	-1	111898769	3393
ENSMUSG00000026516	protein_coding	Nvl	ENSMUST00000191728	retained_intron		1	-1	181105146	1502
ENSMUSG00000116750	lincRNA	4931420L22Rik	ENSMUST00000231591	lincRNA		16	1	71131076	774
ENSMUSG00000026516	protein_coding	Nvl	ENSMUST00000193758	retained_intron		1	-1	181138682	2529
ENSMUSG00000079277	protein_coding	Hoxd3	ENSMUST00000111982	protein_coding	principal1	2	1	74736515	2413
ENSMUSG00000028544	protein_coding	Slc5a9	ENSMUST00000128224	processed_transcript		4	-1	111884254	2814
ENSMUSG00000116791	processed_pseudogene	Gm18918	ENSMUST00000231528	processed_pseudogene		16	1	71210854	948
ENSMUSG00000079277	protein_coding	Hoxd3	ENSMUST00000047830	protein_coding	principal1	2	1	74739619	2292
ENSMUSG00000028544	protein_coding	Slc5a9	ENSMUST00000128340	protein_coding		4	-1	111896352	766
ENSMUSG00000061462	protein_coding	Obscn	ENSMUST00000138587	protein_coding		11	-1	59000359	2848
ENSMUSG00000096154	protein_coding	Gm13057	ENSMUST00000105776	protein_coding	principal1	4	1	143551709	2093
ENSMUSG00000079277	protein_coding	Hoxd3	ENSMUST00000140666	protein_coding		2	1	74745674	822
ENSMUSG00000116759	TEC	Gm49666	ENSMUST00000231759	TEC		16	-1	71215759	3930
ENSMUSG00000028544	protein_coding	Slc5a9	ENSMUST00000149922	processed_transcript		4	-1	111891996	497
ENSMUSG00000046032	protein_coding	Snx12	ENSMUST00000120389	protein_coding	principal1	X	-1	101222549	2415
ENSMUSG00000079277	protein_coding	Hoxd3	ENSMUST00000190553	retained_intron		2	1	74745722	2721
ENSMUSG00000110080	processed_transcript	Gm6145	ENSMUST00000211251	lincRNA		14	-1	105643667	2850
ENSMUSG00000028544	protein_coding	Slc5a9	ENSMUST00000131772	processed_transcript		4	-1	111891261	494
ENSMUSG00000110080	processed_transcript	Gm6145	ENSMUST00000209522	lincRNA		14	-1	105626520	710
ENSMUSG00000028544	protein_coding	Slc5a9	ENSMUST00000154838	processed_transcript		4	-1	111880627	672
ENSMUSG00000110080	processed_transcript	Gm6145	ENSMUST00000211114	lincRNA		14	-1	105642066	1148
ENSMUSG00000041377	protein_coding	Ninj2	ENSMUST00000112711	protein_coding	principal3	6	1	120093350	853
ENSMUSG00000110080	processed_transcript	Gm6145	ENSMUST00000210902	lincRNA		14	-1	105642060	1266
ENSMUSG00000085015	lincRNA	Gm14424	ENSMUST00000143191	lincRNA		2	1	74752684	895
ENSMUSG00000110080	processed_transcript	Gm6145	ENSMUST00000210557	lincRNA		14	-1	105642068	835
ENSMUSG00000046032	protein_coding	Snx12	ENSMUST00000077876	protein_coding		X	-1	101222563	1002
ENSMUSG00000041377	protein_coding	Ninj2	ENSMUST00000035244	protein_coding	alternative2	6	1	120193823	823
ENSMUSG00000035443	protein_coding	Thyn1	ENSMUST00000214910	retained_intron		9	1	26999710	774
ENSMUSG00000110080	processed_transcript	Gm6145	ENSMUST00000210292	lincRNA		14	-1	105643648	787
ENSMUSG00000110080	processed_transcript	Gm6145	ENSMUST00000211689	retained_intron		14	-1	105643725	2555
ENSMUSG00000046032	protein_coding	Snx12	ENSMUST00000130826	processed_transcript		X	-1	101214539	517
ENSMUSG00000113306	processed_pseudogene	Mif-ps7	ENSMUST00000223357	processed_pseudogene		12	1	109098227	327
ENSMUSG00000031805	protein_coding	Jak3	ENSMUST00000110013	protein_coding	principal1	8	1	71676296	4009
ENSMUSG00000074625	protein_coding	Arhgap40	ENSMUST00000099133	protein_coding		2	1	158512796	2162
ENSMUSG00000101174	protein_coding	Hoxd4	ENSMUST00000144040	processed_transcript		2	1	74711929	1339
ENSMUSG00000070618	protein_coding	BC080695	ENSMUST00000105774	protein_coding	principal1	4	1	143567475	2095
ENSMUSG00000031805	protein_coding	Jak3	ENSMUST00000051995	protein_coding	principal1	8	1	71676296	4019
ENSMUSG00000074625	protein_coding	Arhgap40	ENSMUST00000135838	retained_intron		2	1	158541737	924
ENSMUSG00000101174	protein_coding	Hoxd4	ENSMUST00000111980	protein_coding	principal1	2	1	74727074	1494
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000206720	protein_coding	principal2	9	-1	44234049	11372
ENSMUSG00000063727	protein_coding	Tnfrsf11b	ENSMUST00000079772	protein_coding	principal1	15	-1	54278484	2818
ENSMUSG00000074625	protein_coding	Arhgap40	ENSMUST00000165398	protein_coding	principal1	2	1	158512796	2028
ENSMUSG00000026204	protein_coding	Ptprn	ENSMUST00000027404	protein_coding	principal1	1	-1	75264213	3554
ENSMUSG00000070618	protein_coding	BC080695	ENSMUST00000105765	protein_coding	principal1	4	1	143551700	2102
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000206147	protein_coding	alternative2	9	-1	44233989	3452
ENSMUSG00000067795	protein_coding	4930444P10Rik	ENSMUST00000115367	protein_coding	alternative2	1	-1	16081212	868
ENSMUSG00000031805	protein_coding	Jak3	ENSMUST00000133263	retained_intron		8	1	71676552	1566
ENSMUSG00000101174	protein_coding	Hoxd4	ENSMUST00000047904	protein_coding	principal1	2	1	74721978	2560
ENSMUSG00000000552	protein_coding	Zfp385a	ENSMUST00000229373	protein_coding	alternative1	15	-1	103334327	2348
ENSMUSG00000104361	processed_pseudogene	Gm38080	ENSMUST00000194035	processed_pseudogene		3	-1	30828832	268
ENSMUSG00000031805	protein_coding	Jak3	ENSMUST00000110012	protein_coding	principal1	8	1	71677551	3774
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000206163	processed_transcript		9	-1	44146255	238
ENSMUSG00000067795	protein_coding	4930444P10Rik	ENSMUST00000145070	protein_coding	principal2	1	-1	16093325	1844
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000037644	protein_coding	alternative2	9	-1	44233996	4901
ENSMUSG00000000552	protein_coding	Zfp385a	ENSMUST00000168828	protein_coding	principal2	15	-1	103340093	2298
ENSMUSG00000027102	protein_coding	Hoxd8	ENSMUST00000151380	protein_coding	principal1	2	1	74704615	557
ENSMUSG00000074918	protein_coding	Inafm2	ENSMUST00000149978	protein_coding	principal1	2	1	118745758	3053
ENSMUSG00000067795	protein_coding	4930444P10Rik	ENSMUST00000151004	protein_coding	principal2	1	-1	16093325	1001
ENSMUSG00000044937	protein_coding	Ttc41	ENSMUST00000075632	protein_coding	principal2	10	1	86705811	4366
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000205968	protein_coding		9	-1	44233984	2809
ENSMUSG00000000552	protein_coding	Zfp385a	ENSMUST00000229551	protein_coding		15	-1	103323510	2221
ENSMUSG00000026204	protein_coding	Ptprn	ENSMUST00000187216	retained_intron		1	-1	75257997	728
ENSMUSG00000116982	lincRNA	4930567J20Rik	ENSMUST00000231541	lincRNA		16	1	71249884	729
ENSMUSG00000034487	protein_coding	Poglut3	ENSMUST00000037853	protein_coding	principal1	9	1	53384025	3642
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000206258	protein_coding		9	-1	44154258	237
ENSMUSG00000027102	protein_coding	Hoxd8	ENSMUST00000019749	protein_coding		2	1	74704905	2634
ENSMUSG00000026204	protein_coding	Ptprn	ENSMUST00000186178	protein_coding		1	-1	75263907	459
ENSMUSG00000031805	protein_coding	Jak3	ENSMUST00000130624	retained_intron		8	1	71678335	4049
ENSMUSG00000044937	protein_coding	Ttc41	ENSMUST00000217747	protein_coding		10	1	86705812	1949
ENSMUSG00000038628	protein_coding	Polr3k	ENSMUST00000039551	protein_coding	principal1	2	1	181864337	2948
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000206125	retained_intron		9	-1	44154231	283
ENSMUSG00000026204	protein_coding	Ptprn	ENSMUST00000189769	protein_coding		1	-1	75264050	512
ENSMUSG00000116664	processed_pseudogene	Gm18549	ENSMUST00000232521	processed_pseudogene		16	-1	71855787	850
ENSMUSG00000034487	protein_coding	Poglut3	ENSMUST00000214164	protein_coding		9	1	53390617	402
ENSMUSG00000027102	protein_coding	Hoxd8	ENSMUST00000074721	protein_coding		2	1	74705152	1758
ENSMUSG00000038628	protein_coding	Polr3k	ENSMUST00000153214	retained_intron		2	1	181864360	474
ENSMUSG00000116966	processed_pseudogene	Gm18550	ENSMUST00000232273	processed_pseudogene		16	1	71857257	982
ENSMUSG00000026204	protein_coding	Ptprn	ENSMUST00000185849	protein_coding		1	-1	75264502	410
ENSMUSG00000112152	processed_pseudogene	Gm47045	ENSMUST00000218094	processed_pseudogene		10	1	71703721	453
ENSMUSG00000000154	protein_coding	Slc22a18	ENSMUST00000052348	protein_coding	principal1	7	1	143473736	1525
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000205313	retained_intron		9	-1	44157057	664
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000206540	protein_coding		9	-1	44164129	298
ENSMUSG00000026204	protein_coding	Ptprn	ENSMUST00000188401	processed_transcript		1	-1	75264208	425
ENSMUSG00000112714	processed_pseudogene	Gm4798	ENSMUST00000218024	processed_pseudogene		10	1	71704290	1699
ENSMUSG00000035443	protein_coding	Thyn1	ENSMUST00000213770	protein_coding		9	1	26999710	775
ENSMUSG00000075277	bidirectional_promoter_lncRNA	Haglr	ENSMUST00000230704	bidirectional_promoter_lncRNA		2	-1	74754042	1178
ENSMUSG00000044937	protein_coding	Ttc41	ENSMUST00000061458	protein_coding		10	1	86705844	1815
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000206629	processed_transcript		9	-1	44185965	443
ENSMUSG00000075277	bidirectional_promoter_lncRNA	Haglr	ENSMUST00000230511	bidirectional_promoter_lncRNA		2	-1	74753471	1053
ENSMUSG00000034342	protein_coding	Cbl	ENSMUST00000205755	protein_coding		9	-1	44233544	457
ENSMUSG00000035443	protein_coding	Thyn1	ENSMUST00000213683	protein_coding	principal1	9	1	26999720	1107
ENSMUSG00000075277	bidirectional_promoter_lncRNA	Haglr	ENSMUST00000230341	bidirectional_promoter_lncRNA		2	-1	74753477	992
ENSMUSG00000044937	protein_coding	Ttc41	ENSMUST00000219108	protein_coding	alternative2	10	1	86712918	2206
ENSMUSG00000075277	bidirectional_promoter_lncRNA	Haglr	ENSMUST00000152462	bidirectional_promoter_lncRNA		2	-1	74762896	1003
ENSMUSG00000075277	bidirectional_promoter_lncRNA	Haglr	ENSMUST00000229136	bidirectional_promoter_lncRNA		2	-1	74753447	1243
ENSMUSG00000035443	protein_coding	Thyn1	ENSMUST00000039161	protein_coding	principal1	9	1	26999722	918
ENSMUSG00000106350	protein_coding	Gm4869	ENSMUST00000197549	protein_coding	principal1	5	1	140445645	2955
ENSMUSG00000075277	bidirectional_promoter_lncRNA	Haglr	ENSMUST00000230540	bidirectional_promoter_lncRNA		2	-1	74753447	1031
ENSMUSG00000044937	protein_coding	Ttc41	ENSMUST00000219476	nonsense_mediated_decay		10	1	86736886	1592
ENSMUSG00000075277	bidirectional_promoter_lncRNA	Haglr	ENSMUST00000100000	bidirectional_promoter_lncRNA		2	-1	74750506	2085
ENSMUSG00000035443	protein_coding	Thyn1	ENSMUST00000214458	retained_intron		9	1	26999728	853
ENSMUSG00000094559	protein_coding	Cyp2d34	ENSMUST00000109515	protein_coding	principal1	15	-1	82620945	1660
ENSMUSG00000105056	processed_pseudogene	Gm42805	ENSMUST00000196158	processed_pseudogene		5	-1	140453891	276
ENSMUSG00000035443	protein_coding	Thyn1	ENSMUST00000217143	retained_intron		9	1	27003060	963
ENSMUSG00000086559	lincRNA	Gm14426	ENSMUST00000128562	lincRNA		2	1	74754455	249
ENSMUSG00000044937	protein_coding	Ttc41	ENSMUST00000219070	processed_transcript		10	1	86753432	635
ENSMUSG00000035443	protein_coding	Thyn1	ENSMUST00000215024	retained_intron		9	1	27005612	559
ENSMUSG00000094559	protein_coding	Cyp2d34	ENSMUST00000230716	retained_intron		15	-1	82618336	2071
ENSMUSG00000116901	processed_pseudogene	Gm49667	ENSMUST00000232427	processed_pseudogene		16	1	71879044	186
ENSMUSG00000035443	protein_coding	Thyn1	ENSMUST00000216361	retained_intron		9	1	27006605	520
ENSMUSG00000000154	protein_coding	Slc22a18	ENSMUST00000150791	nonsense_mediated_decay		7	1	143473768	862
ENSMUSG00000094559	protein_coding	Cyp2d34	ENSMUST00000229833	nonsense_mediated_decay		15	-1	82620946	735
ENSMUSG00000111505	TEC	Gm48673	ENSMUST00000215598	TEC		9	-1	27024921	3369
ENSMUSG00000112743	protein_coding	Gm49358	ENSMUST00000218802	protein_coding	principal1	10	1	86763972	1254
ENSMUSG00000000154	protein_coding	Slc22a18	ENSMUST00000145943	nonsense_mediated_decay		7	1	143473780	1383
ENSMUSG00000000154	protein_coding	Slc22a18	ENSMUST00000141988	nonsense_mediated_decay		7	1	143473805	862
ENSMUSG00000086112	antisense	4930563I02Rik	ENSMUST00000149364	antisense		14	1	60087071	459
ENSMUSG00000083397	processed_pseudogene	Gm5466	ENSMUST00000119395	processed_pseudogene		2	1	181896823	1890
ENSMUSG00000098923	protein_coding	Tmem185b	ENSMUST00000183952	protein_coding	principal1	1	1	119526160	2824
ENSMUSG00000086112	antisense	4930563I02Rik	ENSMUST00000154835	antisense		14	1	60087517	971
ENSMUSG00000056366	processed_pseudogene	Fabp3-ps1	ENSMUST00000070435	processed_pseudogene		10	-1	86732388	402
ENSMUSG00000098923	protein_coding	Tmem185b	ENSMUST00000183607	processed_transcript		1	1	119526173	681
ENSMUSG00000072068	processed_pseudogene	Gm16261	ENSMUST00000096813	processed_pseudogene		14	1	60154151	205
ENSMUSG00000000154	protein_coding	Slc22a18	ENSMUST00000105917	protein_coding	principal1	7	1	143475101	1552
ENSMUSG00000082926	processed_pseudogene	Gm8172	ENSMUST00000120762	processed_pseudogene		X	-1	69606245	750
ENSMUSG00000098447	antisense	Gm27184	ENSMUST00000185095	antisense		1	-1	119526359	607
ENSMUSG00000000555	protein_coding	Itga5	ENSMUST00000215331	nonsense_mediated_decay		15	-1	103366748	4415
ENSMUSG00000086676	antisense	Gm14705	ENSMUST00000154109	antisense		X	-1	69361269	1824
ENSMUSG00000086676	antisense	Gm14705	ENSMUST00000187253	antisense		X	-1	69360341	352
ENSMUSG00000115327	processed_pseudogene	Gm7566	ENSMUST00000228522	processed_pseudogene		15	-1	54305134	570
ENSMUSG00000098505	protein_coding	Gm14496	ENSMUST00000071760	protein_coding	principal2	2	1	181991129	5421
ENSMUSG00000098505	protein_coding	Gm14496	ENSMUST00000089788	retained_intron		2	1	181991129	6544
ENSMUSG00000050978	processed_pseudogene	Gm5215	ENSMUST00000054380	processed_pseudogene		15	-1	54312365	405
ENSMUSG00000098505	protein_coding	Gm14496	ENSMUST00000236373	protein_coding	alternative2	2	1	181991129	5418
ENSMUSG00000014837	protein_coding	4931428F04Rik	ENSMUST00000212922	protein_coding	principal1	8	-1	105289050	3313
ENSMUSG00000098505	protein_coding	Gm14496	ENSMUST00000184507	protein_coding	alternative2	2	1	181991129	5196
ENSMUSG00000014837	protein_coding	4931428F04Rik	ENSMUST00000014981	protein_coding	principal1	8	-1	105289864	3492
ENSMUSG00000014837	protein_coding	4931428F04Rik	ENSMUST00000212219	protein_coding	principal1	8	-1	105289078	2044
ENSMUSG00000022039	protein_coding	Adam2	ENSMUST00000022618	protein_coding	principal1	14	-1	66077733	2551
ENSMUSG00000114267	TEC	Gm48600	ENSMUST00000225771	TEC		14	1	11904679	4480
ENSMUSG00000014837	protein_coding	4931428F04Rik	ENSMUST00000212529	retained_intron		8	-1	105289504	630
ENSMUSG00000114246	TEC	Gm48603	ENSMUST00000225204	TEC		14	-1	12152584	1138
ENSMUSG00000014837	protein_coding	4931428F04Rik	ENSMUST00000171788	protein_coding	principal1	8	-1	105289528	3552
ENSMUSG00000085883	antisense	Gm3848	ENSMUST00000136693	antisense		14	-1	11981223	299
ENSMUSG00000101731	lincRNA	3830432H09Rik	ENSMUST00000188909	lincRNA		1	-1	119536165	2414
ENSMUSG00000031988	protein_coding	Vps26b	ENSMUST00000034470	protein_coding	principal1	9	-1	27030065	3575
ENSMUSG00000085883	antisense	Gm3848	ENSMUST00000151564	antisense		14	-1	11981208	301
ENSMUSG00000101731	lincRNA	3830432H09Rik	ENSMUST00000186206	lincRNA		1	-1	119535245	1572
ENSMUSG00000022039	protein_coding	Adam2	ENSMUST00000225667	retained_intron		14	-1	66077697	1438
ENSMUSG00000054027	protein_coding	Nt5dc3	ENSMUST00000099396	protein_coding	principal1	10	1	86779005	5952
ENSMUSG00000110611	antisense	Gm20163	ENSMUST00000212232	antisense		8	1	105289678	494
ENSMUSG00000114310	TEC	Gm48602	ENSMUST00000225152	TEC		14	1	11767943	3369
ENSMUSG00000031988	protein_coding	Vps26b	ENSMUST00000213917	retained_intron		9	-1	27030030	2654
ENSMUSG00000110611	antisense	Gm20163	ENSMUST00000212288	antisense		8	1	105289989	989
ENSMUSG00000118516	polymorphic_pseudogene	AC118710.1	ENSMUST00000238885	processed_transcript		15	-1	82642046	3078
ENSMUSG00000114431	TEC	Gm48601	ENSMUST00000224051	TEC		14	1	11867594	3032
ENSMUSG00000068165	processed_pseudogene	Gm10233	ENSMUST00000089275	processed_pseudogene		14	1	66045080	628
ENSMUSG00000054027	protein_coding	Nt5dc3	ENSMUST00000218792	retained_intron		10	1	86825103	335
ENSMUSG00000118516	polymorphic_pseudogene	AC118710.1	ENSMUST00000239057	polymorphic_pseudogene	principal1	15	-1	82642025	1626
ENSMUSG00000081614	processed_pseudogene	Gm9436	ENSMUST00000120949	processed_pseudogene		X	-1	17676284	1855
ENSMUSG00000002791	transcribed_unprocessed_pseudogene	Pdxk-ps	ENSMUST00000159650	processed_transcript		17	-1	32091423	2342
ENSMUSG00000083781	processed_pseudogene	Gm14842	ENSMUST00000119577	processed_pseudogene		X	1	101237993	269
ENSMUSG00000004270	protein_coding	Lpcat3	ENSMUST00000135516	retained_intron		6	1	124663027	2373
ENSMUSG00000115908	unprocessed_pseudogene	Cyp2d35-ps	ENSMUST00000230415	unprocessed_pseudogene		15	-1	82654711	1494
ENSMUSG00000096716	processed_pseudogene	Gm5755	ENSMUST00000152394	processed_pseudogene		X	-1	17881506	837
ENSMUSG00000116130	antisense	Gm49431	ENSMUST00000231012	antisense		15	1	82621092	401
ENSMUSG00000002791	transcribed_unprocessed_pseudogene	Pdxk-ps	ENSMUST00000160550	transcribed_unprocessed_pseudogene		17	-1	32100286	950
ENSMUSG00000031189	protein_coding	Aff2	ENSMUST00000033532	protein_coding	principal1	X	1	69360294	4523
ENSMUSG00000096235	processed_pseudogene	Gm5123	ENSMUST00000121905	processed_pseudogene		X	-1	17913818	837
ENSMUSG00000002791	transcribed_unprocessed_pseudogene	Pdxk-ps	ENSMUST00000183934	processed_transcript		17	-1	32107350	680
ENSMUSG00000075088	protein_coding	Olfr1239	ENSMUST00000217181	protein_coding	principal1	2	-1	89420367	1516
ENSMUSG00000002791	transcribed_unprocessed_pseudogene	Pdxk-ps	ENSMUST00000235497	retained_intron		17	-1	32090255	579
ENSMUSG00000031189	protein_coding	Aff2	ENSMUST00000143097	processed_transcript		X	1	69360700	1449
ENSMUSG00000060143	lincRNA	Gm10076	ENSMUST00000227553	lincRNA		14	1	105681829	383
ENSMUSG00000075088	protein_coding	Olfr1239	ENSMUST00000216762	protein_coding	principal1	2	-1	89420407	1643
ENSMUSG00000060143	lincRNA	Gm10076	ENSMUST00000073238	lincRNA		14	1	105681828	384
ENSMUSG00000031189	protein_coding	Aff2	ENSMUST00000151662	retained_intron		X	1	69856695	3072
ENSMUSG00000075088	protein_coding	Olfr1239	ENSMUST00000099780	protein_coding	principal1	2	-1	89418411	918
ENSMUSG00000031189	protein_coding	Aff2	ENSMUST00000139977	processed_transcript		X	1	69360505	670
ENSMUSG00000025043	protein_coding	Dusp21	ENSMUST00000026018	protein_coding	principal1	X	1	18145857	845
ENSMUSG00000081632	processed_pseudogene	Gm11443	ENSMUST00000118790	processed_pseudogene		11	1	85950495	479
ENSMUSG00000043251	protein_coding	Exoc3l	ENSMUST00000057855	protein_coding	principal1	8	-1	105296098	2497
ENSMUSG00000004270	protein_coding	Lpcat3	ENSMUST00000004381	protein_coding	principal1	6	1	124663027	2281
ENSMUSG00000004270	protein_coding	Lpcat3	ENSMUST00000128721	nonsense_mediated_decay		6	1	124663172	771
ENSMUSG00000043251	protein_coding	Exoc3l	ENSMUST00000212777	nonsense_mediated_decay		8	-1	105295940	2161
ENSMUSG00000042903	protein_coding	Foxo4	ENSMUST00000062000	protein_coding	principal1	X	1	101254528	3162
ENSMUSG00000004270	protein_coding	Lpcat3	ENSMUST00000141069	retained_intron		6	1	124663181	550
ENSMUSG00000043251	protein_coding	Exoc3l	ENSMUST00000212138	retained_intron		8	-1	105293143	1241
ENSMUSG00000020722	protein_coding	Cacng1	ENSMUST00000021065	protein_coding	principal1	11	-1	107716522	1249
ENSMUSG00000004270	protein_coding	Lpcat3	ENSMUST00000133797	retained_intron		6	1	124663215	667
ENSMUSG00000043251	protein_coding	Exoc3l	ENSMUST00000212359	retained_intron		8	-1	105293251	610
ENSMUSG00000004270	protein_coding	Lpcat3	ENSMUST00000141546	retained_intron		6	1	124701419	448
ENSMUSG00000042903	protein_coding	Foxo4	ENSMUST00000150558	processed_transcript		X	1	101254567	1030
ENSMUSG00000004270	protein_coding	Lpcat3	ENSMUST00000152176	processed_transcript		6	1	124702257	533
ENSMUSG00000043251	protein_coding	Exoc3l	ENSMUST00000212215	processed_transcript		8	-1	105296024	609
ENSMUSG00000042903	protein_coding	Foxo4	ENSMUST00000138437	protein_coding		X	1	101254821	1345
ENSMUSG00000082079	protein_coding	Dnmt3c	ENSMUST00000119996	protein_coding	principal1	2	1	153696652	2223
ENSMUSG00000043251	protein_coding	Exoc3l	ENSMUST00000212974	processed_transcript		8	-1	105296101	751
ENSMUSG00000004270	protein_coding	Lpcat3	ENSMUST00000130020	retained_intron		6	1	124702755	820
ENSMUSG00000043251	protein_coding	Exoc3l	ENSMUST00000212261	retained_intron		8	-1	105296075	625
ENSMUSG00000004270	protein_coding	Lpcat3	ENSMUST00000150597	retained_intron		6	1	124703005	732
ENSMUSG00000045838	protein_coding	Ccdc9b	ENSMUST00000059997	protein_coding	principal1	2	-1	118762661	4703
ENSMUSG00000018569	protein_coding	Cldn7	ENSMUST00000108597	protein_coding	principal1	11	1	69964779	913
ENSMUSG00000018569	protein_coding	Cldn7	ENSMUST00000060651	protein_coding		11	1	69964824	835
ENSMUSG00000004268	protein_coding	Emg1	ENSMUST00000204334	retained_intron		6	-1	124708413	4329
ENSMUSG00000010760	protein_coding	Phlda2	ENSMUST00000010904	protein_coding	principal1	7	-1	143502541	757
ENSMUSG00000018569	protein_coding	Cldn7	ENSMUST00000108596	protein_coding		11	1	69964835	664
ENSMUSG00000085523	antisense	Gm15945	ENSMUST00000146755	antisense		15	1	75661407	810
ENSMUSG00000000555	protein_coding	Itga5	ENSMUST00000023128	protein_coding	principal1	15	-1	103366763	4382
ENSMUSG00000010760	protein_coding	Phlda2	ENSMUST00000207425	protein_coding		7	-1	143502993	376
ENSMUSG00000045838	protein_coding	Ccdc9b	ENSMUST00000151270	retained_intron		2	-1	118762625	1403
ENSMUSG00000010760	protein_coding	Phlda2	ENSMUST00000207561	processed_transcript		7	-1	143503150	363
ENSMUSG00000000555	protein_coding	Itga5	ENSMUST00000230775	retained_intron		15	-1	103351378	563
ENSMUSG00000014776	protein_coding	Nol3	ENSMUST00000014920	protein_coding	principal1	8	1	105276140	3176
ENSMUSG00000000555	protein_coding	Itga5	ENSMUST00000230460	retained_intron		15	-1	103356651	425
ENSMUSG00000004268	protein_coding	Emg1	ENSMUST00000004379	protein_coding	principal1	6	-1	124712178	1034
ENSMUSG00000018569	protein_coding	Cldn7	ENSMUST00000018713	protein_coding	principal1	11	1	69965396	1335
ENSMUSG00000104327	TEC	Gm37322	ENSMUST00000193409	TEC		15	1	103378071	337
ENSMUSG00000004268	protein_coding	Emg1	ENSMUST00000125795	processed_transcript		6	-1	124705659	481
ENSMUSG00000018569	protein_coding	Cldn7	ENSMUST00000151515	protein_coding		11	1	69966918	373
ENSMUSG00000004268	protein_coding	Emg1	ENSMUST00000142187	retained_intron		6	-1	124712069	917
ENSMUSG00000036599	protein_coding	Chst12	ENSMUST00000043050	protein_coding	principal1	5	1	140505550	2331
ENSMUSG00000004268	protein_coding	Emg1	ENSMUST00000141251	retained_intron		6	-1	124712141	1074
ENSMUSG00000004268	protein_coding	Emg1	ENSMUST00000203238	protein_coding		6	-1	124712057	381
ENSMUSG00000036599	protein_coding	Chst12	ENSMUST00000124142	protein_coding		5	1	140505575	766
ENSMUSG00000021745	protein_coding	Ptprg	ENSMUST00000022264	protein_coding	principal1	14	1	11553532	9213
ENSMUSG00000109244	lincRNA	Gm44751	ENSMUST00000208302	lincRNA		7	1	88311478	4387
ENSMUSG00000055978	protein_coding	Fut2	ENSMUST00000069800	protein_coding	principal1	7	-1	45666394	2955
ENSMUSG00000115211	processed_pseudogene	Gm18152	ENSMUST00000227121	processed_pseudogene		15	-1	54459280	581
ENSMUSG00000055978	protein_coding	Fut2	ENSMUST00000210620	protein_coding		7	-1	45666343	606
ENSMUSG00000002763	protein_coding	Pex6	ENSMUST00000002840	protein_coding	principal1	17	1	46711463	3200
ENSMUSG00000055978	protein_coding	Fut2	ENSMUST00000211324	processed_transcript		7	-1	45666308	357
ENSMUSG00000055978	protein_coding	Fut2	ENSMUST00000209759	processed_transcript		7	-1	45666301	2234
ENSMUSG00000055978	protein_coding	Fut2	ENSMUST00000210470	processed_transcript		7	-1	45666267	417
ENSMUSG00000038591	protein_coding	Colec10	ENSMUST00000036737	protein_coding	principal1	15	1	54410774	4587
ENSMUSG00000031304	protein_coding	Il2rg	ENSMUST00000033664	protein_coding	principal1	X	-1	101268255	1670
ENSMUSG00000000934	protein_coding	Top1mt	ENSMUST00000000958	protein_coding	principal1	15	-1	75678800	1903
ENSMUSG00000031304	protein_coding	Il2rg	ENSMUST00000135038	protein_coding		X	-1	101267434	597
ENSMUSG00000002763	protein_coding	Pex6	ENSMUST00000144964	retained_intron		17	1	46711463	3383
ENSMUSG00000031304	protein_coding	Il2rg	ENSMUST00000145074	retained_intron		X	-1	101268190	1335
ENSMUSG00000000934	protein_coding	Top1mt	ENSMUST00000230774	processed_transcript		15	-1	75668734	754
ENSMUSG00000030559	protein_coding	Rab38	ENSMUST00000107256	protein_coding	principal1	7	1	88430273	1577
ENSMUSG00000031304	protein_coding	Il2rg	ENSMUST00000127538	processed_transcript		X	-1	101268158	558
ENSMUSG00000002763	protein_coding	Pex6	ENSMUST00000127897	processed_transcript		17	1	46711476	1453
ENSMUSG00000000934	protein_coding	Top1mt	ENSMUST00000230469	processed_transcript		15	-1	75670265	713
ENSMUSG00000002763	protein_coding	Pex6	ENSMUST00000148872	retained_intron		17	1	46720211	551
ENSMUSG00000030559	protein_coding	Rab38	ENSMUST00000208478	protein_coding		7	1	88430394	579
ENSMUSG00000090141	protein_coding	Gm614	ENSMUST00000125656	processed_transcript		X	-1	101263975	757
ENSMUSG00000080748	processed_pseudogene	Gm15661	ENSMUST00000117390	processed_pseudogene		7	-1	88449230	556
ENSMUSG00000090141	protein_coding	Gm614	ENSMUST00000101358	protein_coding	principal1	X	-1	101263992	748
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000107010	protein_coding	alternative2	7	1	101348067	5147
ENSMUSG00000092463	protein_coding	Gm20489	ENSMUST00000117736	protein_coding	principal1	X	-1	101269023	1350
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000137384	protein_coding		7	1	101361262	356
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000138628	protein_coding		7	1	101361477	363
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000185144	protein_coding	alternative2	9	-1	77347863	2921
ENSMUSG00000097331	lincRNA	F420014N23Rik	ENSMUST00000219079	lincRNA		10	1	127195249	659
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000133423	protein_coding		7	1	101362003	521
ENSMUSG00000097331	lincRNA	F420014N23Rik	ENSMUST00000181578	lincRNA		10	1	127195249	2396
ENSMUSG00000027479	protein_coding	Mapre1	ENSMUST00000028981	protein_coding	principal1	2	1	153741274	7336
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000034910	protein_coding		9	-1	77347870	1227
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000084896	protein_coding	alternative2	7	1	101372993	4926
ENSMUSG00000021745	protein_coding	Ptprg	ENSMUST00000142917	nonsense_mediated_decay		14	1	11553553	5591
ENSMUSG00000005131	protein_coding	4930550C14Rik	ENSMUST00000214790	processed_transcript		9	1	53402325	558
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000184848	protein_coding		9	-1	77347793	1019
ENSMUSG00000021745	protein_coding	Ptprg	ENSMUST00000148113	retained_intron		14	1	11553581	2595
ENSMUSG00000027479	protein_coding	Mapre1	ENSMUST00000123795	processed_transcript		2	1	153741602	483
ENSMUSG00000021745	protein_coding	Ptprg	ENSMUST00000155727	nonsense_mediated_decay		14	1	12091160	408
ENSMUSG00000027479	protein_coding	Mapre1	ENSMUST00000123570	processed_transcript		2	1	153745393	692
ENSMUSG00000021940	protein_coding	Ptpn20	ENSMUST00000022508	protein_coding	principal1	14	1	33589207	3153
ENSMUSG00000021745	protein_coding	Ptprg	ENSMUST00000226099	nonsense_mediated_decay		14	1	12153983	739
ENSMUSG00000114797	protein_coding	Gm49336	ENSMUST00000225311	protein_coding		14	-1	60251479	2475
ENSMUSG00000028790	protein_coding	Khdrbs1	ENSMUST00000129342	nonsense_mediated_decay		4	-1	129742297	2600
ENSMUSG00000021745	protein_coding	Ptprg	ENSMUST00000223890	processed_transcript		14	1	12164890	905
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000084895	protein_coding	principal3	7	1	101378190	4404
ENSMUSG00000021745	protein_coding	Ptprg	ENSMUST00000119888	protein_coding		14	1	12189943	2787
ENSMUSG00000021940	protein_coding	Ptpn20	ENSMUST00000227887	nonsense_mediated_decay		14	1	33603109	792
ENSMUSG00000025417	protein_coding	Pip4k2c	ENSMUST00000013970	protein_coding	principal1	10	-1	127211555	3307
ENSMUSG00000028790	protein_coding	Khdrbs1	ENSMUST00000139936	retained_intron		4	-1	129713820	748
ENSMUSG00000114797	protein_coding	Gm49336	ENSMUST00000041905	protein_coding	principal1	14	-1	60251507	3913
ENSMUSG00000021745	protein_coding	Ptprg	ENSMUST00000134290	processed_transcript		14	1	12218946	426
ENSMUSG00000021940	protein_coding	Ptpn20	ENSMUST00000226512	nonsense_mediated_decay		14	1	33604942	1467
ENSMUSG00000025417	protein_coding	Pip4k2c	ENSMUST00000218386	retained_intron		10	-1	127211585	2706
ENSMUSG00000028790	protein_coding	Khdrbs1	ENSMUST00000066257	protein_coding	principal1	4	-1	129742296	3738
ENSMUSG00000114797	protein_coding	Gm49336	ENSMUST00000225111	protein_coding		14	-1	60251445	2936
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000127873	protein_coding		7	1	101378369	628
ENSMUSG00000028790	protein_coding	Khdrbs1	ENSMUST00000139281	retained_intron		4	-1	129742303	1916
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000152082	processed_transcript		7	1	101382827	351
ENSMUSG00000114797	protein_coding	Gm49336	ENSMUST00000223713	processed_transcript		14	-1	60232977	519
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000184415	protein_coding	alternative2	9	-1	77347801	1726
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000141083	protein_coding		7	1	101382828	401
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000148902	protein_coding		7	1	101384020	381
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000184322	protein_coding		9	-1	77251829	2668
ENSMUSG00000080944	processed_pseudogene	Gm12967	ENSMUST00000122147	processed_pseudogene		4	-1	129761916	289
ENSMUSG00000056018	protein_coding	Ccdc7b	ENSMUST00000108745	protein_coding		8	1	129067134	1047
ENSMUSG00000114797	protein_coding	Gm49336	ENSMUST00000223596	retained_intron		14	-1	60232137	4987
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000185039	protein_coding		9	-1	77347916	1295
ENSMUSG00000114797	protein_coding	Gm49336	ENSMUST00000224575	processed_transcript		14	-1	60240964	286
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000130016	protein_coding		7	1	101385397	400
ENSMUSG00000005131	protein_coding	4930550C14Rik	ENSMUST00000215668	protein_coding	alternative2	9	1	53403337	2732
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000183686	protein_coding		9	-1	77138451	459
ENSMUSG00000114797	protein_coding	Gm49336	ENSMUST00000225572	retained_intron		14	-1	60251406	3080
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000134143	protein_coding		7	1	101385402	412
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000183955	protein_coding	principal5	9	-1	77251875	3069
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000213314	processed_transcript		7	1	101385608	1356
ENSMUSG00000069972	processed_pseudogene	Rps13-ps2	ENSMUST00000182017	processed_pseudogene		7	-1	88530898	453
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000184006	protein_coding		9	-1	77347861	910
ENSMUSG00000040415	protein_coding	Dtx3	ENSMUST00000038217	protein_coding	principal2	10	-1	127195709	1944
ENSMUSG00000098174	processed_pseudogene	Gm8183	ENSMUST00000183134	processed_pseudogene		7	-1	88572849	980
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000184138	protein_coding		9	-1	77347851	581
ENSMUSG00000063895	protein_coding	Nupl1	ENSMUST00000225805	nonsense_mediated_decay	principal1	14	-1	60251431	3602
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000184316	protein_coding		9	-1	77251838	669
ENSMUSG00000097305	antisense	Gm17276	ENSMUST00000237900	antisense		17	1	32113411	1029
ENSMUSG00000005131	protein_coding	4930550C14Rik	ENSMUST00000005262	protein_coding	principal2	9	1	53405286	1237
ENSMUSG00000087286	processed_pseudogene	Gm9013	ENSMUST00000132939	processed_pseudogene		14	-1	60040491	882
ENSMUSG00000040415	protein_coding	Dtx3	ENSMUST00000130855	protein_coding	alternative1	10	-1	127195709	1925
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000184106	processed_transcript		9	-1	77340627	836
ENSMUSG00000005131	protein_coding	4930550C14Rik	ENSMUST00000217318	protein_coding	alternative2	9	1	53405298	1055
ENSMUSG00000097305	antisense	Gm17276	ENSMUST00000180839	antisense		17	1	32113429	2786
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000184944	retained_intron		9	-1	77252134	2955
ENSMUSG00000097305	antisense	Gm17276	ENSMUST00000236612	antisense		17	1	32113747	617
ENSMUSG00000021254	protein_coding	Gpatch2l	ENSMUST00000221368	protein_coding	principal2	12	1	86241858	4355
ENSMUSG00000032355	protein_coding	Mlip	ENSMUST00000183350	processed_transcript		9	-1	77352969	2408
ENSMUSG00000040415	protein_coding	Dtx3	ENSMUST00000116229	protein_coding		10	-1	127195727	1994
ENSMUSG00000021254	protein_coding	Gpatch2l	ENSMUST00000071106	protein_coding	alternative2	12	1	86241875	3829
ENSMUSG00000102783	TEC	Gm38254	ENSMUST00000192276	TEC		9	-1	77303075	1009
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000098243	protein_coding		7	1	101394368	3693
ENSMUSG00000040415	protein_coding	Dtx3	ENSMUST00000137151	protein_coding		10	-1	127194466	346
ENSMUSG00000021254	protein_coding	Gpatch2l	ENSMUST00000220810	retained_intron		12	1	86256932	358
ENSMUSG00000021254	protein_coding	Gpatch2l	ENSMUST00000220646	retained_intron		12	1	86259479	3089
ENSMUSG00000021254	protein_coding	Gpatch2l	ENSMUST00000222299	processed_transcript		12	1	86261676	1130
ENSMUSG00000040415	protein_coding	Dtx3	ENSMUST00000144322	protein_coding		10	-1	127195728	624
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000155754	protein_coding		7	1	101394655	325
ENSMUSG00000097488	lincRNA	4732487G21Rik	ENSMUST00000181495	lincRNA		12	-1	86306006	2664
ENSMUSG00000040415	protein_coding	Dtx3	ENSMUST00000125254	retained_intron		10	-1	127195719	346
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000153340	processed_transcript		7	1	101395849	328
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000156017	processed_transcript		7	1	101398344	157
ENSMUSG00000056069	protein_coding	Otulinl	ENSMUST00000226170	protein_coding		15	-1	27681515	3043
ENSMUSG00000106598	lincRNA	Gm43532	ENSMUST00000199389	lincRNA		5	1	84428805	3816
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000125284	retained_intron		7	1	101401781	621
ENSMUSG00000105845	lincRNA	Gm42808	ENSMUST00000198212	lincRNA		5	-1	140546392	285
ENSMUSG00000041530	protein_coding	Ago1	ENSMUST00000097888	protein_coding	principal1	4	-1	126468583	7227
ENSMUSG00000105658	processed_pseudogene	Gm43531	ENSMUST00000200676	processed_pseudogene		5	1	84618706	1114
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000210162	retained_intron		7	1	101404747	801
ENSMUSG00000041530	protein_coding	Ago1	ENSMUST00000239399	protein_coding		4	-1	126468583	7227
ENSMUSG00000032812	protein_coding	Arap1	ENSMUST00000124637	retained_intron		7	1	101407889	882
ENSMUSG00000106389	processed_pseudogene	Gm21006	ENSMUST00000196930	processed_pseudogene		5	-1	84866845	667
ENSMUSG00000116769	lincRNA	8030451O07Rik	ENSMUST00000231223	lincRNA		16	-1	72234302	1888
ENSMUSG00000116769	lincRNA	8030451O07Rik	ENSMUST00000231977	lincRNA		16	-1	72234327	1920
ENSMUSG00000081906	protein_coding	Rpl9-ps1	ENSMUST00000117199	translated_processed_pseudogene		11	-1	83645621	576
ENSMUSG00000105633	processed_pseudogene	Gm32158	ENSMUST00000200135	processed_pseudogene		5	1	140546435	404
ENSMUSG00000081906	protein_coding	Rpl9-ps1	ENSMUST00000182502	protein_coding	principal1	11	-1	83645621	576
ENSMUSG00000056069	protein_coding	Otulinl	ENSMUST00000226145	protein_coding	principal1	15	-1	27681512	2950
ENSMUSG00000041530	protein_coding	Ago1	ENSMUST00000127800	nonsense_mediated_decay		4	-1	126461782	3606
ENSMUSG00000041530	protein_coding	Ago1	ENSMUST00000176315	protein_coding		4	-1	126459207	1662
ENSMUSG00000115477	processed_pseudogene	Gm20070	ENSMUST00000226726	processed_pseudogene		15	1	54487900	227
ENSMUSG00000041530	protein_coding	Ago1	ENSMUST00000156533	retained_intron		4	-1	126443361	588
ENSMUSG00000056069	protein_coding	Otulinl	ENSMUST00000100739	protein_coding		15	-1	27681579	2867
ENSMUSG00000041530	protein_coding	Ago1	ENSMUST00000149425	retained_intron		4	-1	126460125	678
ENSMUSG00000038146	protein_coding	Notch3	ENSMUST00000087723	protein_coding	principal1	17	-1	32166852	8016
ENSMUSG00000041530	protein_coding	Ago1	ENSMUST00000239428	protein_coding	principal1	4	-1	126468421	7065
ENSMUSG00000033850	protein_coding	Olfr1015	ENSMUST00000214726	processed_transcript		2	1	85782017	2370
ENSMUSG00000033850	protein_coding	Olfr1015	ENSMUST00000215945	protein_coding	principal1	2	1	85782021	2479
ENSMUSG00000056069	protein_coding	Otulinl	ENSMUST00000231473	nonsense_mediated_decay		15	-1	27662363	473
ENSMUSG00000038146	protein_coding	Notch3	ENSMUST00000236544	retained_intron		17	-1	32133765	645
ENSMUSG00000038146	protein_coding	Notch3	ENSMUST00000235816	protein_coding		17	-1	32137825	717
ENSMUSG00000033850	protein_coding	Olfr1015	ENSMUST00000047870	protein_coding	principal1	2	1	85785474	1016
ENSMUSG00000056069	protein_coding	Otulinl	ENSMUST00000226581	protein_coding		15	-1	27662440	448
ENSMUSG00000056069	protein_coding	Otulinl	ENSMUST00000232492	retained_intron		15	-1	27660152	562
ENSMUSG00000027530	protein_coding	Fabp12	ENSMUST00000029043	protein_coding	principal1	3	-1	10301183	2512
ENSMUSG00000027530	protein_coding	Fabp12	ENSMUST00000172126	protein_coding	principal1	3	-1	10254225	779
ENSMUSG00000081523	unprocessed_pseudogene	Gm13058	ENSMUST00000117097	unprocessed_pseudogene		4	-1	143597611	1435
ENSMUSG00000070564	protein_coding	Ntn5	ENSMUST00000182750	protein_coding	principal1	7	1	45684022	1758
ENSMUSG00000027530	protein_coding	Fabp12	ENSMUST00000117917	protein_coding	principal1	3	-1	10254252	648
ENSMUSG00000036586	protein_coding	Grifin	ENSMUST00000042993	protein_coding	principal1	5	-1	140565071	613
ENSMUSG00000027530	protein_coding	Fabp12	ENSMUST00000119761	protein_coding	principal1	3	-1	10301174	548
ENSMUSG00000056018	protein_coding	Ccdc7b	ENSMUST00000140887	nonsense_mediated_decay		8	1	129067140	1476
ENSMUSG00000070564	protein_coding	Ntn5	ENSMUST00000107742	protein_coding		7	1	45684416	1574
ENSMUSG00000070564	protein_coding	Ntn5	ENSMUST00000183120	protein_coding		7	1	45684429	1491
ENSMUSG00000037661	protein_coding	Gpr160	ENSMUST00000130294	retained_intron		3	1	30855950	2523
ENSMUSG00000000982	protein_coding	Ccl3	ENSMUST00000001008	protein_coding	principal1	11	-1	83649355	766
ENSMUSG00000020723	protein_coding	Cacng4	ENSMUST00000021066	protein_coding	principal1	11	-1	107794557	3500
ENSMUSG00000040364	protein_coding	Sec1	ENSMUST00000040636	protein_coding	principal1	7	-1	45694402	2470
ENSMUSG00000020723	protein_coding	Cacng4	ENSMUST00000134076	processed_transcript		11	-1	107742079	422
ENSMUSG00000067369	protein_coding	Trmt2b	ENSMUST00000128115	nonsense_mediated_decay		X	-1	134276982	4099
ENSMUSG00000029066	protein_coding	Mrpl20	ENSMUST00000184339	processed_transcript		4	1	155802878	488
ENSMUSG00000087184	processed_transcript	Gm11650	ENSMUST00000141271	processed_transcript		11	1	107793866	1145
ENSMUSG00000056018	protein_coding	Ccdc7b	ENSMUST00000148234	nonsense_mediated_decay		8	1	129067205	1499
ENSMUSG00000021983	protein_coding	Atp8a2	ENSMUST00000080368	protein_coding	principal1	14	-1	60086834	12886
ENSMUSG00000056423	protein_coding	Uts2b	ENSMUST00000070531	protein_coding	principal1	16	-1	27370239	835
ENSMUSG00000104878	lincRNA	Gm43567	ENSMUST00000197581	lincRNA		5	1	85720774	1978
ENSMUSG00000075209	protein_coding	Olfr1016	ENSMUST00000217410	protein_coding	principal1	2	-1	85802544	2738
ENSMUSG00000106225	processed_pseudogene	Gm43564	ENSMUST00000196185	processed_pseudogene		5	-1	86005617	211
ENSMUSG00000075209	protein_coding	Olfr1016	ENSMUST00000216425	protein_coding	principal1	2	-1	85802544	2698
ENSMUSG00000024077	protein_coding	Strn	ENSMUST00000145910	protein_coding	principal1	17	-1	78737196	8629
ENSMUSG00000021983	protein_coding	Atp8a2	ENSMUST00000145071	nonsense_mediated_decay		14	-1	60086882	1499
ENSMUSG00000104092	TEC	A930014E01Rik	ENSMUST00000194572	TEC		3	1	10304791	330
ENSMUSG00000075209	protein_coding	Olfr1016	ENSMUST00000099915	protein_coding	principal1	2	-1	85800268	930
ENSMUSG00000103592	processed_pseudogene	Gm38364	ENSMUST00000191814	processed_pseudogene		3	1	10309048	179
ENSMUSG00000021983	protein_coding	Atp8a2	ENSMUST00000131670	protein_coding		14	-1	60197179	1725
ENSMUSG00000053773	protein_coding	Rdh8	ENSMUST00000066387	protein_coding	principal1	9	1	20818503	1405
ENSMUSG00000024077	protein_coding	Strn	ENSMUST00000024881	protein_coding		17	-1	78688817	2967
ENSMUSG00000063354	protein_coding	Slc39a4	ENSMUST00000073428	protein_coding		15	-1	76616848	2063
ENSMUSG00000021983	protein_coding	Atp8a2	ENSMUST00000140924	protein_coding		14	-1	60177539	373
ENSMUSG00000107553	TEC	Gm44266	ENSMUST00000205235	TEC		6	1	138600842	500
ENSMUSG00000063558	protein_coding	Aox1	ENSMUST00000001027	protein_coding	principal1	1	1	58029931	4423
ENSMUSG00000024077	protein_coding	Strn	ENSMUST00000145480	protein_coding		17	-1	78684352	800
ENSMUSG00000021983	protein_coding	Atp8a2	ENSMUST00000149414	protein_coding		14	-1	60087355	363
ENSMUSG00000081057	unprocessed_pseudogene	Olfr1017-ps1	ENSMUST00000121263	unprocessed_pseudogene		2	-1	85808980	664
ENSMUSG00000118527	unprocessed_pseudogene	AC170598.1	ENSMUST00000238827	unprocessed_pseudogene		9	1	20839528	2094
ENSMUSG00000117285	processed_pseudogene	Gm49863	ENSMUST00000233584	processed_pseudogene		17	1	78750995	502
ENSMUSG00000021983	protein_coding	Atp8a2	ENSMUST00000152688	processed_transcript		14	-1	60197143	399
ENSMUSG00000056018	protein_coding	Ccdc7b	ENSMUST00000026912	protein_coding	principal1	8	1	129067223	1447
ENSMUSG00000063558	protein_coding	Aox1	ENSMUST00000160168	retained_intron		1	1	58029964	6429
ENSMUSG00000114584	TEC	Gm47694	ENSMUST00000225931	TEC		14	-1	60216419	5446
ENSMUSG00000117192	processed_pseudogene	Gm18649	ENSMUST00000233688	processed_pseudogene		17	1	78752255	461
ENSMUSG00000056018	protein_coding	Ccdc7b	ENSMUST00000108744	processed_transcript		8	1	129118041	939
ENSMUSG00000046717	protein_coding	Igbp1b	ENSMUST00000054786	protein_coding	principal1	6	-1	138658544	1456
ENSMUSG00000114593	transcribed_processed_pseudogene	Gm19716	ENSMUST00000224060	processed_transcript		14	1	59642312	656
ENSMUSG00000056018	protein_coding	Ccdc7b	ENSMUST00000148621	processed_transcript		8	1	129133702	475
ENSMUSG00000063354	protein_coding	Slc39a4	ENSMUST00000230977	protein_coding	principal1	15	-1	76617384	2750
ENSMUSG00000056018	protein_coding	Ccdc7b	ENSMUST00000189055	processed_transcript		8	1	129144116	715
ENSMUSG00000114593	transcribed_processed_pseudogene	Gm19716	ENSMUST00000224256	transcribed_processed_pseudogene		14	1	59642548	1837
ENSMUSG00000063354	protein_coding	Slc39a4	ENSMUST00000229613	retained_intron		15	-1	76614306	379
ENSMUSG00000043716	protein_coding	Rpl7	ENSMUST00000140597	processed_transcript		1	-1	16102082	421
ENSMUSG00000067369	protein_coding	Trmt2b	ENSMUST00000087541	protein_coding	principal1	X	-1	134276982	3119
ENSMUSG00000109135	processed_pseudogene	Gm6240	ENSMUST00000208014	processed_pseudogene		7	-1	88782398	473
ENSMUSG00000063354	protein_coding	Slc39a4	ENSMUST00000230317	processed_transcript		15	-1	76616430	1035
ENSMUSG00000109278	lincRNA	Gm45144	ENSMUST00000207473	lincRNA		7	-1	88864892	354
ENSMUSG00000067369	protein_coding	Trmt2b	ENSMUST00000145066	retained_intron		X	-1	134276927	3237
ENSMUSG00000075288	processed_pseudogene	Gm6913	ENSMUST00000100019	processed_pseudogene		14	1	60141063	348
ENSMUSG00000067369	protein_coding	Trmt2b	ENSMUST00000113252	protein_coding	principal1	X	-1	134276920	3128
ENSMUSG00000082479	processed_pseudogene	Gm4746	ENSMUST00000120395	processed_pseudogene		X	-1	90419372	2406
ENSMUSG00000067369	protein_coding	Trmt2b	ENSMUST00000087540	protein_coding		X	-1	134276984	822
ENSMUSG00000084289	processed_pseudogene	Gm6977	ENSMUST00000121568	processed_pseudogene		X	-1	90745062	512
ENSMUSG00000028788	protein_coding	Ptp4a2	ENSMUST00000132386	processed_transcript		4	1	129811219	624
ENSMUSG00000018930	protein_coding	Ccl4	ENSMUST00000019074	protein_coding	principal1	11	1	83662584	660
ENSMUSG00000028788	protein_coding	Ptp4a2	ENSMUST00000132411	retained_intron		4	1	129811222	583
ENSMUSG00000102929	TEC	Gm37154	ENSMUST00000192266	TEC		1	1	171354126	1290
ENSMUSG00000031201	protein_coding	Brcc3	ENSMUST00000033544	protein_coding	principal2	X	1	75416628	4310
ENSMUSG00000091497	protein_coding	Gm44	ENSMUST00000172155	protein_coding	principal1	X	1	90892142	993
ENSMUSG00000114656	lincRNA	2810403G07Rik	ENSMUST00000224082	lincRNA		13	-1	112417365	1622
ENSMUSG00000031201	protein_coding	Brcc3	ENSMUST00000118428	protein_coding	alternative2	X	1	75416697	2093
ENSMUSG00000083029	processed_pseudogene	Gm13720	ENSMUST00000120741	processed_pseudogene		2	-1	85816208	196
ENSMUSG00000045259	protein_coding	Klhdc9	ENSMUST00000061878	protein_coding	principal1	1	-1	171360798	1558
ENSMUSG00000107686	processed_pseudogene	Gm9038	ENSMUST00000203400	processed_pseudogene		6	-1	138860124	604
ENSMUSG00000022000	protein_coding	Zc3h13	ENSMUST00000226417	processed_transcript		14	1	75284377	534
ENSMUSG00000043716	protein_coding	Rpl7	ENSMUST00000058437	protein_coding	principal2	1	-1	16104662	1163
ENSMUSG00000029066	protein_coding	Mrpl20	ENSMUST00000030942	protein_coding	principal1	4	1	155803521	764
ENSMUSG00000031201	protein_coding	Brcc3	ENSMUST00000151938	retained_intron		X	1	75416700	2521
ENSMUSG00000029066	protein_coding	Mrpl20	ENSMUST00000185148	protein_coding		4	1	155803647	494
ENSMUSG00000031201	protein_coding	Brcc3	ENSMUST00000114074	protein_coding	principal2	X	1	75416710	2473
ENSMUSG00000043716	protein_coding	Rpl7	ENSMUST00000141217	retained_intron		1	-1	16104402	1597
ENSMUSG00000043716	protein_coding	Rpl7	ENSMUST00000151017	retained_intron		1	-1	16102848	1229
ENSMUSG00000031201	protein_coding	Brcc3	ENSMUST00000133781	protein_coding		X	1	75416716	479
ENSMUSG00000029066	protein_coding	Mrpl20	ENSMUST00000137487	nonsense_mediated_decay		4	1	155803650	810
ENSMUSG00000043716	protein_coding	Rpl7	ENSMUST00000149566	protein_coding	alternative2	1	-1	16104227	838
ENSMUSG00000031201	protein_coding	Brcc3	ENSMUST00000152228	protein_coding		X	1	75417307	473
ENSMUSG00000029066	protein_coding	Mrpl20	ENSMUST00000130188	protein_coding		4	1	155803652	442
ENSMUSG00000031201	protein_coding	Brcc3	ENSMUST00000124321	retained_intron		X	1	75433978	2614
ENSMUSG00000043716	protein_coding	Rpl7	ENSMUST00000125005	retained_intron		1	-1	16104384	784
ENSMUSG00000029066	protein_coding	Mrpl20	ENSMUST00000143503	processed_transcript		4	1	155803759	579
ENSMUSG00000028788	protein_coding	Ptp4a2	ENSMUST00000030578	protein_coding	principal1	4	1	129820221	3646
ENSMUSG00000006412	protein_coding	Pfdn2	ENSMUST00000135941	protein_coding	principal1	1	1	171345670	1735
ENSMUSG00000022000	protein_coding	Zc3h13	ENSMUST00000227049	protein_coding	alternative2	14	1	75284386	6144
ENSMUSG00000086496	processed_transcript	Gm14204	ENSMUST00000145773	processed_transcript		2	-1	158610659	1490
ENSMUSG00000006412	protein_coding	Pfdn2	ENSMUST00000006579	protein_coding		1	1	171345730	885
ENSMUSG00000028788	protein_coding	Ptp4a2	ENSMUST00000127558	processed_transcript		4	1	129820680	339
ENSMUSG00000022000	protein_coding	Zc3h13	ENSMUST00000228470	processed_transcript		14	1	75338072	730
ENSMUSG00000028788	protein_coding	Ptp4a2	ENSMUST00000133662	processed_transcript		4	1	129820721	417
ENSMUSG00000086496	processed_transcript	Gm14204	ENSMUST00000123944	processed_transcript		2	-1	158610723	5380
ENSMUSG00000006412	protein_coding	Pfdn2	ENSMUST00000138323	processed_transcript		1	1	171356390	474
ENSMUSG00000022000	protein_coding	Zc3h13	ENSMUST00000022577	protein_coding	principal2	14	1	75284373	6151
ENSMUSG00000028788	protein_coding	Ptp4a2	ENSMUST00000141754	processed_transcript		4	1	129839151	658
ENSMUSG00000086496	processed_transcript	Gm14204	ENSMUST00000123016	processed_transcript		2	-1	158610606	378
ENSMUSG00000086496	processed_transcript	Gm14204	ENSMUST00000155319	processed_transcript		2	-1	158610590	726
ENSMUSG00000115615	lincRNA	Gm49200	ENSMUST00000227736	lincRNA		14	-1	75400446	699
ENSMUSG00000046804	protein_coding	Phgr1	ENSMUST00000130293	protein_coding	principal2	2	1	118772769	542
ENSMUSG00000046804	protein_coding	Phgr1	ENSMUST00000061360	protein_coding	alternative2	2	1	118772769	538
ENSMUSG00000053158	protein_coding	Fes	ENSMUST00000205617	nonsense_mediated_decay		7	-1	80387936	3371
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000113055	protein_coding	principal1	5	1	92683435	6765
ENSMUSG00000028788	protein_coding	Ptp4a2	ENSMUST00000165853	protein_coding	principal1	4	1	129820708	3382
ENSMUSG00000002769	protein_coding	Gnmt	ENSMUST00000147112	retained_intron		17	-1	46726801	855
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000168878	protein_coding		5	1	92683625	5630
ENSMUSG00000070729	processed_pseudogene	Gm12966	ENSMUST00000118024	processed_pseudogene		4	1	129899093	810
ENSMUSG00000037661	protein_coding	Gpr160	ENSMUST00000108261	protein_coding	principal1	3	1	30855950	2213
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000202767	processed_transcript		5	1	92804220	3307
ENSMUSG00000113462	processed_pseudogene	Gm48248	ENSMUST00000220847	processed_pseudogene		12	-1	111559010	233
ENSMUSG00000002769	protein_coding	Gnmt	ENSMUST00000002846	protein_coding	principal1	17	-1	46729168	1035
ENSMUSG00000037661	protein_coding	Gpr160	ENSMUST00000108259	protein_coding	principal1	3	1	30855950	1916
ENSMUSG00000037771	protein_coding	Slc32a1	ENSMUST00000045738	protein_coding	principal1	2	1	158610767	2797
ENSMUSG00000096995	bidirectional_promoter_lncRNA	2810029C07Rik	ENSMUST00000180698	bidirectional_promoter_lncRNA		12	-1	111574402	1954
ENSMUSG00000037661	protein_coding	Gpr160	ENSMUST00000046748	protein_coding	principal1	3	1	30855989	1977
ENSMUSG00000002769	protein_coding	Gnmt	ENSMUST00000233086	processed_transcript		17	-1	46726702	554
ENSMUSG00000096995	bidirectional_promoter_lncRNA	2810029C07Rik	ENSMUST00000221597	bidirectional_promoter_lncRNA		12	-1	111574340	1422
ENSMUSG00000024479	protein_coding	Mal2	ENSMUST00000025356	protein_coding	principal1	15	1	54571192	2950
ENSMUSG00000087563	antisense	Gm14205	ENSMUST00000138427	antisense		2	-1	158611820	739
ENSMUSG00000053158	protein_coding	Fes	ENSMUST00000206735	protein_coding		7	-1	80379630	472
ENSMUSG00000105699	lincRNA	Gm43703	ENSMUST00000200523	lincRNA		5	-1	140606551	763
ENSMUSG00000037661	protein_coding	Gpr160	ENSMUST00000194979	protein_coding		3	1	30855993	346
ENSMUSG00000044134	protein_coding	Pheta1	ENSMUST00000198271	protein_coding	principal1	5	1	121848984	2335
ENSMUSG00000039086	protein_coding	Ss18l1	ENSMUST00000041126	protein_coding	principal1	2	1	180042509	4343
ENSMUSG00000082315	transcribed_processed_pseudogene	Gm16523	ENSMUST00000203640	processed_transcript		2	-1	39162235	4750
ENSMUSG00000037661	protein_coding	Gpr160	ENSMUST00000108258	protein_coding	principal1	3	1	30856015	2139
ENSMUSG00000082315	transcribed_processed_pseudogene	Gm16523	ENSMUST00000121253	transcribed_processed_pseudogene		2	-1	39161989	592
ENSMUSG00000044134	protein_coding	Pheta1	ENSMUST00000056654	protein_coding	principal1	5	1	121848995	2368
ENSMUSG00000053158	protein_coding	Fes	ENSMUST00000206002	retained_intron		7	-1	80380436	1921
ENSMUSG00000107833	processed_pseudogene	Gm18791	ENSMUST00000204611	processed_pseudogene		2	1	39153964	726
ENSMUSG00000037661	protein_coding	Gpr160	ENSMUST00000147697	protein_coding		3	1	30856143	754
ENSMUSG00000044134	protein_coding	Pheta1	ENSMUST00000198155	protein_coding		5	1	121849005	636
ENSMUSG00000107955	TEC	Gm44027	ENSMUST00000203419	TEC		2	-1	39182041	3480
ENSMUSG00000091722	protein_coding	Siah3	ENSMUST00000164848	protein_coding	principal1	14	1	75455982	4472
ENSMUSG00000104719	TEC	4933437G19Rik	ENSMUST00000197910	TEC		5	-1	121848844	1178
ENSMUSG00000037661	protein_coding	Gpr160	ENSMUST00000166278	protein_coding	principal1	3	1	30855950	1689
ENSMUSG00000114869	lincRNA	Gm48876	ENSMUST00000224307	lincRNA		13	-1	112426340	1841
ENSMUSG00000108178	TEC	Gm44267	ENSMUST00000204132	TEC		6	1	139137127	385
ENSMUSG00000083664	unprocessed_pseudogene	Gm11433	ENSMUST00000118318	unprocessed_pseudogene		11	1	83677518	228
ENSMUSG00000066592	processed_pseudogene	Gm7589	ENSMUST00000085631	processed_pseudogene		9	-1	59146210	534
ENSMUSG00000107569	TEC	Gm44268	ENSMUST00000204814	TEC		6	1	139140770	164
ENSMUSG00000110789	lincRNA	Gm33053	ENSMUST00000215275	lincRNA		9	-1	59235071	1144
ENSMUSG00000104555	processed_pseudogene	Gm5983	ENSMUST00000197739	processed_pseudogene		3	1	157410017	770
ENSMUSG00000114468	lincRNA	Gm48879	ENSMUST00000225524	lincRNA		13	-1	112436596	377
ENSMUSG00000083932	processed_pseudogene	Gm11438	ENSMUST00000121582	processed_pseudogene		11	-1	83681726	189
ENSMUSG00000108128	lincRNA	4922502N22Rik	ENSMUST00000204038	lincRNA		6	-1	139322576	1149
ENSMUSG00000084781	processed_transcript	D930015M05Rik	ENSMUST00000126002	processed_transcript		2	1	92408892	1190
ENSMUSG00000043892	protein_coding	Olfr1018	ENSMUST00000214416	protein_coding	principal1	2	1	85818479	3186
ENSMUSG00000034913	protein_coding	Cby2	ENSMUST00000035243	protein_coding	principal3	14	-1	75591985	1430
ENSMUSG00000043892	protein_coding	Olfr1018	ENSMUST00000054201	protein_coding	principal1	2	1	85822973	936
ENSMUSG00000081449	unprocessed_pseudogene	Gm11432	ENSMUST00000117334	unprocessed_pseudogene		11	1	83687610	231
ENSMUSG00000026411	protein_coding	Tmem9	ENSMUST00000165125	protein_coding	principal1	1	1	136008150	901
ENSMUSG00000080927	unprocessed_pseudogene	Gm11430	ENSMUST00000121317	unprocessed_pseudogene		11	1	83695275	217
ENSMUSG00000034913	protein_coding	Cby2	ENSMUST00000165569	protein_coding	alternative2	14	-1	75591949	1538
ENSMUSG00000053158	protein_coding	Fes	ENSMUST00000080932	protein_coding	principal2	7	-1	80387946	2762
ENSMUSG00000026411	protein_coding	Tmem9	ENSMUST00000063719	protein_coding	principal1	1	1	136017967	1806
ENSMUSG00000075208	protein_coding	Olfr1019	ENSMUST00000213515	protein_coding	principal1	2	-1	85845483	3031
ENSMUSG00000075208	protein_coding	Olfr1019	ENSMUST00000102634	protein_coding	principal1	2	-1	85841789	933
ENSMUSG00000053158	protein_coding	Fes	ENSMUST00000206744	nonsense_mediated_decay		7	-1	80387871	2890
ENSMUSG00000026411	protein_coding	Tmem9	ENSMUST00000117950	protein_coding	principal1	1	1	136018062	847
ENSMUSG00000083163	unprocessed_pseudogene	Gm11429	ENSMUST00000119089	unprocessed_pseudogene		11	1	83701291	144
ENSMUSG00000026411	protein_coding	Tmem9	ENSMUST00000118832	retained_intron		1	1	136026997	864
ENSMUSG00000053158	protein_coding	Fes	ENSMUST00000206479	nonsense_mediated_decay		7	-1	80387941	4403
ENSMUSG00000026411	protein_coding	Tmem9	ENSMUST00000140545	processed_transcript		1	1	136033254	781
ENSMUSG00000034913	protein_coding	Cby2	ENSMUST00000164082	protein_coding	alternative2	14	-1	75593110	1560
ENSMUSG00000053158	protein_coding	Fes	ENSMUST00000206728	protein_coding	alternative1	7	-1	80387419	2707
ENSMUSG00000053158	protein_coding	Fes	ENSMUST00000206539	nonsense_mediated_decay		7	-1	80387895	362
ENSMUSG00000034913	protein_coding	Cby2	ENSMUST00000169658	protein_coding	alternative2	14	-1	75593110	1474
ENSMUSG00000053158	protein_coding	Fes	ENSMUST00000206698	protein_coding		7	-1	80387881	443
ENSMUSG00000034913	protein_coding	Cby2	ENSMUST00000226623	processed_transcript		14	-1	75593116	482
ENSMUSG00000053158	protein_coding	Fes	ENSMUST00000206271	retained_intron		7	-1	80387894	363
ENSMUSG00000029068	protein_coding	Ccnl2	ENSMUST00000030944	protein_coding	principal1	4	1	155812489	2442
ENSMUSG00000092164	protein_coding	Rergl	ENSMUST00000170650	protein_coding	principal1	6	-1	139501976	958
ENSMUSG00000105834	antisense	4930592C13Rik	ENSMUST00000196791	antisense		3	-1	157534090	661
ENSMUSG00000017707	protein_coding	Serinc3	ENSMUST00000017851	protein_coding	principal1	2	-1	163645131	3683
ENSMUSG00000017707	protein_coding	Serinc3	ENSMUST00000129854	processed_transcript		2	-1	163645125	621
ENSMUSG00000033578	protein_coding	Tmem35a	ENSMUST00000037687	protein_coding	principal1	X	1	134295225	1918
ENSMUSG00000046975	protein_coding	Olfr1020	ENSMUST00000215347	protein_coding	principal1	2	1	85847030	2640
ENSMUSG00000058812	antisense	0610039K10Rik	ENSMUST00000184724	antisense		2	1	163644850	952
ENSMUSG00000058812	antisense	0610039K10Rik	ENSMUST00000076667	antisense		2	1	163644850	951
ENSMUSG00000046975	protein_coding	Olfr1020	ENSMUST00000055840	protein_coding	principal1	2	1	85849420	1079
ENSMUSG00000059972	lincRNA	Gm14773	ENSMUST00000125932	lincRNA		X	1	91155168	451
ENSMUSG00000024101	protein_coding	Washc1	ENSMUST00000072383	protein_coding	principal1	17	1	66111545	2905
ENSMUSG00000042535	protein_coding	Gtpbp1	ENSMUST00000046463	protein_coding	principal1	15	1	79690845	3449
ENSMUSG00000024101	protein_coding	Washc1	ENSMUST00000233500	retained_intron		17	1	66111553	435
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000102800	protein_coding	principal2	2	-1	34755232	8339
ENSMUSG00000042535	protein_coding	Gtpbp1	ENSMUST00000230898	protein_coding		15	1	79693959	348
ENSMUSG00000024101	protein_coding	Washc1	ENSMUST00000116556	protein_coding	principal1	17	1	66111645	1831
ENSMUSG00000042535	protein_coding	Gtpbp1	ENSMUST00000229046	protein_coding		15	1	79693985	657
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000113111	protein_coding		2	-1	34717297	4543
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000113101	protein_coding		2	-1	34704386	2200
ENSMUSG00000042535	protein_coding	Gtpbp1	ENSMUST00000230262	protein_coding		15	1	79694180	522
ENSMUSG00000024101	protein_coding	Washc1	ENSMUST00000233354	protein_coding		17	1	66111653	401
ENSMUSG00000029068	protein_coding	Ccnl2	ENSMUST00000139066	retained_intron		4	1	155812501	4220
ENSMUSG00000022002	protein_coding	Erich6b	ENSMUST00000238633	protein_coding	principal1	14	1	75642249	1961
ENSMUSG00000069792	protein_coding	Wfdc17	ENSMUST00000092836	protein_coding	principal1	11	1	83703991	533
ENSMUSG00000042535	protein_coding	Gtpbp1	ENSMUST00000231095	nonsense_mediated_decay		15	1	79707891	763
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000138203	nonsense_mediated_decay		2	-1	34684293	705
ENSMUSG00000029068	protein_coding	Ccnl2	ENSMUST00000129850	retained_intron		4	1	155812519	3411
ENSMUSG00000105466	TEC	Gm42998	ENSMUST00000197053	TEC		3	-1	130705949	2371
ENSMUSG00000022002	protein_coding	Erich6b	ENSMUST00000022579	protein_coding		14	1	75642259	869
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000113054	protein_coding		5	1	92809378	6401
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000167251	processed_transcript		2	-1	34704646	551
ENSMUSG00000042535	protein_coding	Gtpbp1	ENSMUST00000230023	processed_transcript		15	1	79707905	622
ENSMUSG00000024101	protein_coding	Washc1	ENSMUST00000233604	processed_transcript		17	1	66115685	378
ENSMUSG00000107679	lincRNA	4930404I20Rik	ENSMUST00000203246	lincRNA		6	-1	139557611	498
ENSMUSG00000042535	protein_coding	Gtpbp1	ENSMUST00000228991	protein_coding		15	1	79716232	616
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000201772	retained_intron		2	-1	34701099	4040
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000172849	processed_transcript		5	1	92809470	271
ENSMUSG00000042535	protein_coding	Gtpbp1	ENSMUST00000229583	protein_coding		15	1	79717006	593
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000225438	protein_coding		5	1	92856471	5742
ENSMUSG00000029068	protein_coding	Ccnl2	ENSMUST00000136370	retained_intron		4	1	155812778	833
ENSMUSG00000024101	protein_coding	Washc1	ENSMUST00000233589	retained_intron		17	1	66115700	901
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000137528	protein_coding		2	-1	34728947	2506
ENSMUSG00000108147	TEC	4930443G03Rik	ENSMUST00000203475	TEC		6	-1	139577205	1282
ENSMUSG00000024101	protein_coding	Washc1	ENSMUST00000233060	retained_intron		17	1	66116044	699
ENSMUSG00000042535	protein_coding	Gtpbp1	ENSMUST00000230496	retained_intron		15	1	79718911	490
ENSMUSG00000029068	protein_coding	Ccnl2	ENSMUST00000126346	nonsense_mediated_decay		4	1	155813497	1894
ENSMUSG00000024101	protein_coding	Washc1	ENSMUST00000233311	retained_intron		17	1	66116274	687
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000113103	protein_coding		2	-1	34728850	2484
ENSMUSG00000082754	polymorphic_pseudogene	Olfr1021-ps1	ENSMUST00000121914	polymorphic_pseudogene	principal1	2	1	85858928	1042
ENSMUSG00000082208	processed_pseudogene	Gm15379	ENSMUST00000121224	processed_pseudogene		X	1	75458812	648
ENSMUSG00000086954	lincRNA	4930583P06Rik	ENSMUST00000136658	lincRNA		2	-1	124222331	706
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000128855	nonsense_mediated_decay		2	-1	34712218	589
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000150859	processed_transcript		2	-1	34712333	559
ENSMUSG00000041084	protein_coding	Ostc	ENSMUST00000043937	protein_coding	principal1	3	-1	130709444	1067
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000156098	retained_intron		2	-1	34712729	590
ENSMUSG00000083093	unprocessed_pseudogene	Gm15385	ENSMUST00000118725	unprocessed_pseudogene		X	1	75459963	743
ENSMUSG00000057761	protein_coding	Olfr1022	ENSMUST00000054736	protein_coding	principal1	2	1	85868594	948
ENSMUSG00000041084	protein_coding	Ostc	ENSMUST00000197152	retained_intron		3	-1	130696622	704
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000169207	retained_intron		2	-1	34754425	2207
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000113051	protein_coding		5	1	92897993	6435
ENSMUSG00000048709	processed_pseudogene	Gm8666	ENSMUST00000117517	processed_pseudogene		X	-1	75475523	292
ENSMUSG00000041084	protein_coding	Ostc	ENSMUST00000197828	retained_intron		3	-1	130709416	1720
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000142436	protein_coding		2	-1	34754411	675
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000172706	protein_coding		5	1	92925407	687
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000201800	retained_intron		5	1	92938637	3611
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000200869	retained_intron		5	1	92947885	911
ENSMUSG00000029381	protein_coding	Shroom3	ENSMUST00000172752	retained_intron		5	1	92962039	1027
ENSMUSG00000066952	protein_coding	Myo1h	ENSMUST00000169347	protein_coding	alternative2	5	1	114289166	3545
ENSMUSG00000039069	protein_coding	Mtg2	ENSMUST00000147264	retained_intron		2	1	180070588	2224
ENSMUSG00000098100	processed_pseudogene	Gm7572	ENSMUST00000182616	processed_pseudogene		16	1	10044965	766
ENSMUSG00000039069	protein_coding	Mtg2	ENSMUST00000142608	retained_intron		2	1	180070592	2339
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000028224	protein_coding	principal2	2	-1	34754561	5695
ENSMUSG00000066952	protein_coding	Myo1h	ENSMUST00000124316	protein_coding	alternative2	5	1	114314941	2877
ENSMUSG00000026867	protein_coding	Gapvd1	ENSMUST00000113099	protein_coding	alternative1	2	-1	34754561	5758
ENSMUSG00000098170	processed_pseudogene	Gm3890	ENSMUST00000182416	processed_pseudogene		16	-1	10045965	207
ENSMUSG00000062169	protein_coding	Cnih4	ENSMUST00000193907	protein_coding		1	1	181144693	531
ENSMUSG00000112717	processed_pseudogene	Gm6362	ENSMUST00000217686	processed_pseudogene		10	-1	71717757	836
ENSMUSG00000000983	protein_coding	Wfdc18	ENSMUST00000001009	protein_coding	principal1	11	1	83709015	521
ENSMUSG00000039069	protein_coding	Mtg2	ENSMUST00000184862	nonsense_mediated_decay		2	1	180070592	1730
ENSMUSG00000111999	processed_pseudogene	Gm5080	ENSMUST00000220341	processed_pseudogene		10	-1	71799847	743
ENSMUSG00000000983	protein_coding	Wfdc18	ENSMUST00000135654	nonsense_mediated_decay		11	1	83709123	534
ENSMUSG00000000983	protein_coding	Wfdc18	ENSMUST00000139762	retained_intron		11	1	83709125	917
ENSMUSG00000066952	protein_coding	Myo1h	ENSMUST00000152694	retained_intron		5	1	114356815	2673
ENSMUSG00000043859	processed_pseudogene	1700049L16Rik	ENSMUST00000049520	processed_pseudogene		10	-1	71980634	543
ENSMUSG00000066952	protein_coding	Myo1h	ENSMUST00000197773	retained_intron		5	1	114356863	1337
ENSMUSG00000039069	protein_coding	Mtg2	ENSMUST00000108901	protein_coding	principal1	2	1	180071793	1444
ENSMUSG00000066952	protein_coding	Myo1h	ENSMUST00000196467	protein_coding		5	1	114356863	1208
ENSMUSG00000050128	protein_coding	Olfr1023	ENSMUST00000213441	protein_coding	principal1	2	1	85885640	4740
ENSMUSG00000039069	protein_coding	Mtg2	ENSMUST00000136803	retained_intron		2	1	180078620	1009
ENSMUSG00000066952	protein_coding	Myo1h	ENSMUST00000199567	protein_coding		5	1	114356863	1307
ENSMUSG00000039069	protein_coding	Mtg2	ENSMUST00000146182	retained_intron		2	1	180082989	2702
ENSMUSG00000050128	protein_coding	Olfr1023	ENSMUST00000056408	protein_coding	principal1	2	1	85886802	936
ENSMUSG00000066952	protein_coding	Myo1h	ENSMUST00000196676	protein_coding		5	1	114356863	1256
ENSMUSG00000039069	protein_coding	Mtg2	ENSMUST00000087563	protein_coding	principal1	2	1	180078623	1346
ENSMUSG00000066952	protein_coding	Myo1h	ENSMUST00000128379	retained_intron		5	1	114357406	632
ENSMUSG00000066952	protein_coding	Myo1h	ENSMUST00000125230	processed_transcript		5	1	114363415	672
ENSMUSG00000066952	protein_coding	Myo1h	ENSMUST00000202006	protein_coding	principal2	5	1	114314941	4631
ENSMUSG00000062169	protein_coding	Cnih4	ENSMUST00000134115	protein_coding	principal1	1	1	181150931	3268
ENSMUSG00000062169	protein_coding	Cnih4	ENSMUST00000111059	protein_coding		1	1	181150931	3127
ENSMUSG00000062169	protein_coding	Cnih4	ENSMUST00000075968	processed_transcript		1	1	181154738	622
ENSMUSG00000062169	protein_coding	Cnih4	ENSMUST00000111057	retained_intron		1	1	181155720	562
ENSMUSG00000048997	protein_coding	Atxn7l2	ENSMUST00000117409	protein_coding	alternative2	3	-1	108210486	2321
ENSMUSG00000060288	protein_coding	Ppih	ENSMUST00000106317	protein_coding		4	-1	119320499	613
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000080493	protein_coding		2	1	174297859	3519
ENSMUSG00000030079	protein_coding	Ruvbl1	ENSMUST00000032165	protein_coding	principal1	6	1	88465409	1675
ENSMUSG00000097743	lincRNA	Gm16973	ENSMUST00000180752	lincRNA		14	-1	56699361	1972
ENSMUSG00000097743	lincRNA	Gm16973	ENSMUST00000180682	lincRNA		14	-1	56701268	1299
ENSMUSG00000030079	protein_coding	Ruvbl1	ENSMUST00000129035	protein_coding		6	1	88465727	666
ENSMUSG00000001098	protein_coding	Kctd10	ENSMUST00000102581	protein_coding	principal3	5	-1	114380508	3103
ENSMUSG00000112185	processed_pseudogene	Gm47060	ENSMUST00000220117	processed_pseudogene		10	1	72019206	312
ENSMUSG00000001098	protein_coding	Kctd10	ENSMUST00000134532	nonsense_mediated_decay		5	-1	114380489	2019
ENSMUSG00000048997	protein_coding	Atxn7l2	ENSMUST00000102633	protein_coding	principal2	3	-1	108210934	3044
ENSMUSG00000025235	protein_coding	Bbs4	ENSMUST00000026265	protein_coding	principal1	9	-1	59353508	2518
ENSMUSG00000034156	protein_coding	Tspoap1	ENSMUST00000039627	protein_coding	principal2	11	1	87760541	7616
ENSMUSG00000025235	protein_coding	Bbs4	ENSMUST00000217367	protein_coding		9	-1	59327513	538
ENSMUSG00000048997	protein_coding	Atxn7l2	ENSMUST00000141054	retained_intron		3	-1	108208574	3224
ENSMUSG00000048997	protein_coding	Atxn7l2	ENSMUST00000117784	protein_coding	principal2	3	-1	108210462	2387
ENSMUSG00000035236	protein_coding	Scai	ENSMUST00000038874	protein_coding	principal1	2	-1	39190734	10709
ENSMUSG00000025235	protein_coding	Bbs4	ENSMUST00000214832	processed_transcript		9	-1	59353439	596
ENSMUSG00000001098	protein_coding	Kctd10	ENSMUST00000001125	protein_coding	alternative1	5	-1	114380483	1026
ENSMUSG00000034156	protein_coding	Tspoap1	ENSMUST00000100644	protein_coding	alternative2	11	1	87760587	7390
ENSMUSG00000048997	protein_coding	Atxn7l2	ENSMUST00000119650	protein_coding		3	-1	108210466	2274
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000154658	nonsense_mediated_decay		2	1	174297859	3614
ENSMUSG00000025235	protein_coding	Bbs4	ENSMUST00000214225	retained_intron		9	-1	59353449	3757
ENSMUSG00000115132	processed_pseudogene	Gm18888	ENSMUST00000227844	processed_pseudogene		15	-1	6329876	386
ENSMUSG00000001098	protein_coding	Kctd10	ENSMUST00000134173	processed_transcript		5	-1	114372142	777
ENSMUSG00000048997	protein_coding	Atxn7l2	ENSMUST00000127157	protein_coding		3	-1	108209571	1476
ENSMUSG00000001098	protein_coding	Kctd10	ENSMUST00000132646	retained_intron		5	-1	114368669	850
ENSMUSG00000034156	protein_coding	Tspoap1	ENSMUST00000148422	processed_transcript		11	1	87764731	386
ENSMUSG00000001098	protein_coding	Kctd10	ENSMUST00000135170	retained_intron		5	-1	114370207	791
ENSMUSG00000034156	protein_coding	Tspoap1	ENSMUST00000144502	protein_coding		11	1	87776131	752
ENSMUSG00000048997	protein_coding	Atxn7l2	ENSMUST00000196823	processed_transcript		3	-1	108210468	373
ENSMUSG00000001098	protein_coding	Kctd10	ENSMUST00000123538	retained_intron		5	-1	114369252	786
ENSMUSG00000034156	protein_coding	Tspoap1	ENSMUST00000142329	protein_coding		11	1	87776538	2367
ENSMUSG00000086369	lincRNA	E330017L17Rik	ENSMUST00000145196	lincRNA		4	1	129906216	876
ENSMUSG00000086369	lincRNA	E330017L17Rik	ENSMUST00000141731	lincRNA		4	1	129906226	831
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000109088	protein_coding		2	1	174297859	3519
ENSMUSG00000086369	lincRNA	E330017L17Rik	ENSMUST00000129149	lincRNA		4	1	129906258	549
ENSMUSG00000103613	antisense	Gm34882	ENSMUST00000193245	antisense		1	-1	185247889	974
ENSMUSG00000086369	lincRNA	E330017L17Rik	ENSMUST00000139190	lincRNA		4	1	129906433	861
ENSMUSG00000034156	protein_coding	Tspoap1	ENSMUST00000153578	retained_intron		11	1	87777093	3514
ENSMUSG00000034156	protein_coding	Tspoap1	ENSMUST00000148814	retained_intron		11	1	87778793	2678
ENSMUSG00000031285	protein_coding	Dcx	ENSMUST00000033642	protein_coding	alternative1	X	-1	143933311	9074
ENSMUSG00000034156	protein_coding	Tspoap1	ENSMUST00000135957	retained_intron		11	1	87778952	714
ENSMUSG00000034156	protein_coding	Tspoap1	ENSMUST00000133645	protein_coding		11	1	87780294	506
ENSMUSG00000034156	protein_coding	Tspoap1	ENSMUST00000154758	retained_intron		11	1	87781575	732
ENSMUSG00000025236	protein_coding	Adpgk	ENSMUST00000217570	protein_coding	principal2	9	1	59291558	2484
ENSMUSG00000025236	protein_coding	Adpgk	ENSMUST00000213413	retained_intron		9	1	59291572	4152
ENSMUSG00000025236	protein_coding	Adpgk	ENSMUST00000026266	protein_coding	alternative1	9	1	59291572	2464
ENSMUSG00000079184	protein_coding	Mphosph8	ENSMUST00000116468	protein_coding	principal1	14	1	56668248	2939
ENSMUSG00000025236	protein_coding	Adpgk	ENSMUST00000214361	retained_intron		9	1	59291583	5148
ENSMUSG00000079184	protein_coding	Mphosph8	ENSMUST00000130246	processed_transcript		14	1	56672232	416
ENSMUSG00000079184	protein_coding	Mphosph8	ENSMUST00000152606	processed_transcript		14	1	56688381	555
ENSMUSG00000025236	protein_coding	Adpgk	ENSMUST00000215994	processed_transcript		9	1	59311648	2490
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000159552	processed_transcript		15	1	6299788	642
ENSMUSG00000079184	protein_coding	Mphosph8	ENSMUST00000138174	processed_transcript		14	1	56693138	950
ENSMUSG00000079184	protein_coding	Mphosph8	ENSMUST00000152370	processed_transcript		14	1	56693424	617
ENSMUSG00000040035	protein_coding	Disp2	ENSMUST00000063975	protein_coding		2	1	118779719	1505
ENSMUSG00000023973	protein_coding	Cnpy3	ENSMUST00000059844	protein_coding	principal1	17	-1	46752214	1908
ENSMUSG00000033061	protein_coding	Resp18	ENSMUST00000039534	protein_coding	principal1	1	-1	75278415	748
ENSMUSG00000023973	protein_coding	Cnpy3	ENSMUST00000129200	nonsense_mediated_decay		17	-1	46752197	1619
ENSMUSG00000040035	protein_coding	Disp2	ENSMUST00000037547	protein_coding	principal1	2	1	118779722	6626
ENSMUSG00000023973	protein_coding	Cnpy3	ENSMUST00000145877	retained_intron		17	-1	46737627	709
ENSMUSG00000061462	protein_coding	Obscn	ENSMUST00000238536	protein_coding	principal1	11	-1	59136375	26737
ENSMUSG00000033061	protein_coding	Resp18	ENSMUST00000191283	retained_intron		1	-1	75274263	347
ENSMUSG00000023973	protein_coding	Cnpy3	ENSMUST00000121671	protein_coding		17	-1	46752195	561
ENSMUSG00000040035	protein_coding	Disp2	ENSMUST00000110846	protein_coding		2	1	118779739	1732
ENSMUSG00000033061	protein_coding	Resp18	ENSMUST00000186229	nonsense_mediated_decay		1	-1	75278316	494
ENSMUSG00000033061	protein_coding	Resp18	ENSMUST00000189203	retained_intron		1	-1	75278284	648
ENSMUSG00000023973	protein_coding	Cnpy3	ENSMUST00000148656	retained_intron		17	-1	46752177	531
ENSMUSG00000040035	protein_coding	Disp2	ENSMUST00000110843	protein_coding		2	1	118779742	2949
ENSMUSG00000061462	protein_coding	Obscn	ENSMUST00000047441	protein_coding		11	-1	59136375	24175
ENSMUSG00000100556	antisense	Gm28902	ENSMUST00000191531	antisense		1	1	75272605	215
ENSMUSG00000040035	protein_coding	Disp2	ENSMUST00000142072	retained_intron		2	1	118779759	2189
ENSMUSG00000037761	protein_coding	Actr5	ENSMUST00000125390	retained_intron		2	1	158624888	1960
ENSMUSG00000031285	protein_coding	Dcx	ENSMUST00000112851	protein_coding	alternative1	X	-1	143933204	4095
ENSMUSG00000061462	protein_coding	Obscn	ENSMUST00000238245	retained_intron		11	-1	59002361	356
ENSMUSG00000034893	protein_coding	Cog3	ENSMUST00000226686	retained_intron		14	-1	75741714	4311
ENSMUSG00000068742	protein_coding	Cry2	ENSMUST00000090559	protein_coding	principal1	2	-1	92434043	3976
ENSMUSG00000059690	protein_coding	1700020N15Rik	ENSMUST00000075654	protein_coding	principal1	X	1	69945300	525
ENSMUSG00000061462	protein_coding	Obscn	ENSMUST00000132238	nonsense_mediated_decay		11	-1	59035037	4154
ENSMUSG00000060288	protein_coding	Ppih	ENSMUST00000106318	protein_coding	principal1	4	-1	119320546	800
ENSMUSG00000100511	antisense	1700111N16Rik	ENSMUST00000188663	antisense		X	-1	70143588	1133
ENSMUSG00000068742	protein_coding	Cry2	ENSMUST00000111278	protein_coding	principal1	2	-1	92434036	2160
ENSMUSG00000061462	protein_coding	Obscn	ENSMUST00000052872	protein_coding		11	-1	59136396	23027
ENSMUSG00000103727	processed_pseudogene	Gm37097	ENSMUST00000193676	processed_pseudogene		1	1	171362862	336
ENSMUSG00000068742	protein_coding	Cry2	ENSMUST00000125488	processed_transcript		2	-1	92434036	2082
ENSMUSG00000068742	protein_coding	Cry2	ENSMUST00000144842	processed_transcript		2	-1	92432392	337
ENSMUSG00000061462	protein_coding	Obscn	ENSMUST00000020732	protein_coding		11	-1	59136375	23163
ENSMUSG00000038057	protein_coding	Dbil5	ENSMUST00000040806	protein_coding	principal1	11	1	76217608	581
ENSMUSG00000044377	processed_pseudogene	Gm13080	ENSMUST00000120556	processed_pseudogene		4	-1	143612077	420
ENSMUSG00000031285	protein_coding	Dcx	ENSMUST00000087313	protein_coding	alternative1	X	-1	143933124	3120
ENSMUSG00000080701	unprocessed_pseudogene	Gm12340	ENSMUST00000121617	unprocessed_pseudogene		11	1	76144258	462
ENSMUSG00000061462	protein_coding	Obscn	ENSMUST00000219084	protein_coding		11	-1	59139170	20567
ENSMUSG00000061462	protein_coding	Obscn	ENSMUST00000238202	protein_coding		11	-1	59049500	889
ENSMUSG00000060288	protein_coding	Ppih	ENSMUST00000106321	protein_coding	principal1	4	-1	119320484	1288
ENSMUSG00000061462	protein_coding	Obscn	ENSMUST00000133040	protein_coding		11	-1	59079692	2548
ENSMUSG00000031285	protein_coding	Dcx	ENSMUST00000125768	retained_intron		X	-1	143933119	3194
ENSMUSG00000083097	processed_pseudogene	Gm14494	ENSMUST00000118786	processed_pseudogene		2	1	153826171	435
ENSMUSG00000031285	protein_coding	Dcx	ENSMUST00000139920	retained_intron		X	-1	143933050	2617
ENSMUSG00000060288	protein_coding	Ppih	ENSMUST00000056458	protein_coding	principal1	4	-1	119320484	757
ENSMUSG00000017286	protein_coding	Glod4	ENSMUST00000169532	retained_intron		11	-1	76243675	1472
ENSMUSG00000060288	protein_coding	Ppih	ENSMUST00000106319	protein_coding		4	-1	119320497	622
ENSMUSG00000060288	protein_coding	Ppih	ENSMUST00000147077	protein_coding		4	-1	119320417	725
ENSMUSG00000029570	protein_coding	Lfng	ENSMUST00000031555	protein_coding	principal1	5	1	140607320	2305
ENSMUSG00000083477	processed_pseudogene	Gm5555	ENSMUST00000120352	processed_pseudogene		5	1	49552158	1111
ENSMUSG00000084949	antisense	Gm16249	ENSMUST00000124055	antisense		13	-1	54783091	1258
ENSMUSG00000022449	protein_coding	Adamts20	ENSMUST00000035342	protein_coding	principal1	15	-1	94404258	6027
ENSMUSG00000034893	protein_coding	Cog3	ENSMUST00000049168	protein_coding	principal1	14	-1	75754558	4268
ENSMUSG00000029570	protein_coding	Lfng	ENSMUST00000200626	processed_transcript		5	1	140611509	590
ENSMUSG00000035236	protein_coding	Scai	ENSMUST00000204404	nonsense_mediated_decay		2	-1	39190705	2128
ENSMUSG00000029570	protein_coding	Lfng	ENSMUST00000199848	retained_intron		5	1	140611685	1074
ENSMUSG00000034893	protein_coding	Cog3	ENSMUST00000228081	retained_intron		14	-1	75732987	514
ENSMUSG00000022449	protein_coding	Adamts20	ENSMUST00000155907	protein_coding		15	-1	94404258	6886
ENSMUSG00000035236	protein_coding	Scai	ENSMUST00000204093	nonsense_mediated_decay		2	-1	39190692	1792
ENSMUSG00000035236	protein_coding	Scai	ENSMUST00000204500	nonsense_mediated_decay		2	-1	39099410	693
ENSMUSG00000031285	protein_coding	Dcx	ENSMUST00000112856	protein_coding	principal3	X	-1	143933219	1333
ENSMUSG00000005625	protein_coding	Psmd4	ENSMUST00000107237	protein_coding	principal3	3	-1	95042614	1332
ENSMUSG00000035236	protein_coding	Scai	ENSMUST00000147433	nonsense_mediated_decay		2	-1	39190730	1896
ENSMUSG00000044083	protein_coding	Efcab8	ENSMUST00000126656	protein_coding	principal1	2	1	153779931	4261
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000087876	protein_coding		2	1	174297859	3719
ENSMUSG00000026618	protein_coding	Iars2	ENSMUST00000027921	protein_coding	principal1	1	-1	185329396	5471
ENSMUSG00000022449	protein_coding	Adamts20	ENSMUST00000129195	retained_intron		15	-1	94404350	1964
ENSMUSG00000037761	protein_coding	Actr5	ENSMUST00000183731	nonsense_mediated_decay		2	1	158624888	2661
ENSMUSG00000115796	lincRNA	Gm48970	ENSMUST00000226354	lincRNA		14	-1	105862501	505
ENSMUSG00000035236	protein_coding	Scai	ENSMUST00000203872	retained_intron		2	-1	39190734	1762
ENSMUSG00000022449	protein_coding	Adamts20	ENSMUST00000128797	processed_transcript		15	-1	94465418	630
ENSMUSG00000026618	protein_coding	Iars2	ENSMUST00000131770	processed_transcript		1	-1	185288282	1866
ENSMUSG00000044083	protein_coding	Efcab8	ENSMUST00000144827	nonsense_mediated_decay		2	1	153780879	1463
ENSMUSG00000037761	protein_coding	Actr5	ENSMUST00000142531	retained_intron		2	1	158624888	2970
ENSMUSG00000035236	protein_coding	Scai	ENSMUST00000157038	retained_intron		2	-1	39190730	1233
ENSMUSG00000026618	protein_coding	Iars2	ENSMUST00000110975	protein_coding		1	-1	185329396	2801
ENSMUSG00000103794	TEC	4930590H14Rik	ENSMUST00000193999	TEC		9	1	77357352	551
ENSMUSG00000035236	protein_coding	Scai	ENSMUST00000131225	retained_intron		2	-1	39108763	920
ENSMUSG00000044083	protein_coding	Efcab8	ENSMUST00000230058	nonsense_mediated_decay		2	1	153780892	704
ENSMUSG00000035236	protein_coding	Scai	ENSMUST00000203399	retained_intron		2	-1	39121157	458
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000124935	protein_coding		2	1	174327570	832
ENSMUSG00000026618	protein_coding	Iars2	ENSMUST00000110974	protein_coding		1	-1	185329396	2431
ENSMUSG00000044083	protein_coding	Efcab8	ENSMUST00000175856	protein_coding		2	1	153842981	1696
ENSMUSG00000035236	protein_coding	Scai	ENSMUST00000142872	protein_coding		2	-1	39190728	368
ENSMUSG00000022114	protein_coding	Spry2	ENSMUST00000022709	protein_coding	principal1	14	-1	105896819	2087
ENSMUSG00000037761	protein_coding	Actr5	ENSMUST00000045644	protein_coding	principal1	2	1	158624888	2402
ENSMUSG00000099170	lincRNA	5730403I07Rik	ENSMUST00000183878	lincRNA		9	-1	77399418	2033
ENSMUSG00000037362	protein_coding	Ccn3	ENSMUST00000050027	protein_coding	principal1	15	1	54745702	2869
ENSMUSG00000026618	protein_coding	Iars2	ENSMUST00000153211	retained_intron		1	-1	185329396	3292
ENSMUSG00000115800	processed_pseudogene	Frg2f4	ENSMUST00000226185	processed_pseudogene		14	-1	106093482	249
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000156623	protein_coding		2	1	174327699	1427
ENSMUSG00000113230	processed_pseudogene	Gm48101	ENSMUST00000221001	processed_pseudogene		12	1	86347977	121
ENSMUSG00000037761	protein_coding	Actr5	ENSMUST00000183586	processed_transcript		2	1	158631629	506
ENSMUSG00000104368	antisense	2010103J01Rik	ENSMUST00000192375	antisense		1	1	185312187	388
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000149016	protein_coding		2	1	174327730	1256
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000238525	retained_intron		2	1	174327757	1078
ENSMUSG00000036858	protein_coding	Ptcra	ENSMUST00000041012	protein_coding	principal1	17	-1	46763712	1283
ENSMUSG00000090538	processed_pseudogene	Gm4775	ENSMUST00000169588	processed_pseudogene		14	-1	106101166	402
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000133356	protein_coding		2	1	174327757	791
ENSMUSG00000102577	TEC	Gm37969	ENSMUST00000195777	TEC		6	-1	72638555	3409
ENSMUSG00000022113	protein_coding	Trim52	ENSMUST00000022708	protein_coding	principal1	14	1	106106198	3075
ENSMUSG00000062619	protein_coding	2310039H08Rik	ENSMUST00000071430	protein_coding	principal1	17	1	46772635	762
ENSMUSG00000079524	antisense	Gm15402	ENSMUST00000114051	antisense		6	1	72699214	670
ENSMUSG00000022113	protein_coding	Trim52	ENSMUST00000194236	processed_transcript		14	1	106106199	584
ENSMUSG00000104501	TEC	Gm37736	ENSMUST00000193564	TEC		6	-1	72751914	2802
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000087871	protein_coding	principal1	2	1	174327768	3903
ENSMUSG00000115501	processed_pseudogene	Gm48971	ENSMUST00000226534	processed_pseudogene		14	-1	106211978	202
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000168271	retained_intron		7	1	55841745	1876
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000148640	protein_coding		2	1	174328023	607
ENSMUSG00000116341	unprocessed_pseudogene	Cyp2d36-ps	ENSMUST00000230009	unprocessed_pseudogene		15	-1	82683257	1473
ENSMUSG00000005625	protein_coding	Psmd4	ENSMUST00000071664	protein_coding	alternative2	3	-1	95042552	1276
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000109085	protein_coding		2	1	174330006	1789
ENSMUSG00000005625	protein_coding	Psmd4	ENSMUST00000140348	protein_coding		3	-1	95035267	695
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000238318	nonsense_mediated_decay		2	1	174330021	1633
ENSMUSG00000005625	protein_coding	Psmd4	ENSMUST00000117355	protein_coding	alternative2	3	-1	95042543	1756
ENSMUSG00000082060	processed_pseudogene	Gm15048	ENSMUST00000118201	processed_pseudogene		X	1	144147310	954
ENSMUSG00000033356	protein_coding	Pus7l	ENSMUST00000049151	protein_coding	principal1	15	-1	94543547	2840
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000109084	protein_coding		2	1	174330097	1695
ENSMUSG00000033356	protein_coding	Pus7l	ENSMUST00000147832	retained_intron		15	-1	94543493	1471
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000109083	protein_coding		2	1	174330287	730
ENSMUSG00000033356	protein_coding	Pus7l	ENSMUST00000134061	protein_coding		15	-1	94543486	363
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000131125	retained_intron		2	1	174341704	480
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000238660	processed_transcript		2	1	174344312	1131
ENSMUSG00000005625	protein_coding	Psmd4	ENSMUST00000140280	retained_intron		3	-1	95042548	2120
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000238267	protein_coding		2	1	174344317	1071
ENSMUSG00000115754	lincRNA	Gm48972	ENSMUST00000226755	lincRNA		14	-1	106267934	2306
ENSMUSG00000005625	protein_coding	Psmd4	ENSMUST00000136868	retained_intron		3	-1	95042545	1626
ENSMUSG00000115439	lincRNA	Gm36107	ENSMUST00000227226	lincRNA		14	1	106265292	426
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000129534	retained_intron		2	1	174344650	814
ENSMUSG00000005625	protein_coding	Psmd4	ENSMUST00000147960	retained_intron		3	-1	95033916	903
ENSMUSG00000005625	protein_coding	Psmd4	ENSMUST00000143688	processed_transcript		3	-1	95042550	314
ENSMUSG00000063888	protein_coding	Rpl7l1	ENSMUST00000078286	protein_coding	principal1	17	-1	46782656	2606
ENSMUSG00000029253	protein_coding	Cenpc1	ENSMUST00000031170	protein_coding	principal1	5	-1	86065583	3192
ENSMUSG00000063888	protein_coding	Rpl7l1	ENSMUST00000233192	protein_coding	principal1	17	-1	46782656	1310
ENSMUSG00000085139	protein_coding	A730046J19Rik	ENSMUST00000135687	protein_coding	principal1	X	1	144153695	4707
ENSMUSG00000063888	protein_coding	Rpl7l1	ENSMUST00000233349	protein_coding		17	-1	46782672	458
ENSMUSG00000099794	lincRNA	1700128A07Rik	ENSMUST00000186311	lincRNA		14	-1	106486520	860
ENSMUSG00000099794	lincRNA	1700128A07Rik	ENSMUST00000186643	lincRNA		14	-1	106486492	284
ENSMUSG00000063888	protein_coding	Rpl7l1	ENSMUST00000233919	retained_intron		17	-1	46782637	657
ENSMUSG00000115695	processed_pseudogene	Gm48973	ENSMUST00000227281	processed_pseudogene		14	-1	106556243	382
ENSMUSG00000029253	protein_coding	Cenpc1	ENSMUST00000199392	retained_intron		5	-1	86065551	1469
ENSMUSG00000115763	processed_pseudogene	Gm48974	ENSMUST00000226553	processed_pseudogene		14	-1	106620359	772
ENSMUSG00000029253	protein_coding	Cenpc1	ENSMUST00000198059	retained_intron		5	-1	86065547	2341
ENSMUSG00000029253	protein_coding	Cenpc1	ENSMUST00000199141	retained_intron		5	-1	86065522	1370
ENSMUSG00000082121	processed_pseudogene	Gm8199	ENSMUST00000121323	processed_pseudogene		X	-1	144233581	823
ENSMUSG00000084361	processed_pseudogene	Gm8202	ENSMUST00000117682	processed_pseudogene		X	-1	144237212	310
ENSMUSG00000078599	protein_coding	Skint8	ENSMUST00000124862	retained_intron		4	1	111919493	1704
ENSMUSG00000078599	protein_coding	Skint8	ENSMUST00000129547	processed_transcript		4	1	111925085	2581
ENSMUSG00000078599	protein_coding	Skint8	ENSMUST00000147395	processed_transcript		4	1	111919392	545
ENSMUSG00000075517	transcribed_unprocessed_pseudogene	Cyp2d37-ps	ENSMUST00000100380	processed_transcript		15	-1	82693148	1677
ENSMUSG00000078599	protein_coding	Skint8	ENSMUST00000106572	protein_coding	alternative2	4	1	111919398	1290
ENSMUSG00000075517	transcribed_unprocessed_pseudogene	Cyp2d37-ps	ENSMUST00000229594	transcribed_unprocessed_pseudogene		15	-1	82693001	1480
ENSMUSG00000081897	processed_pseudogene	Gm15067	ENSMUST00000119534	processed_pseudogene		X	-1	144268204	156
ENSMUSG00000078599	protein_coding	Skint8	ENSMUST00000165046	protein_coding	principal2	4	1	111919555	1280
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000185956	protein_coding		2	1	174297859	3729
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000098538	protein_coding	alternative2	3	1	145118589	2564
ENSMUSG00000017286	protein_coding	Glod4	ENSMUST00000169701	protein_coding		11	-1	76243663	4203
ENSMUSG00000091723	processed_pseudogene	Gm17366	ENSMUST00000167629	processed_pseudogene		14	-1	106698298	187
ENSMUSG00000106282	transcribed_processed_pseudogene	Gm2287	ENSMUST00000199619	transcribed_processed_pseudogene		5	1	86066757	1000
ENSMUSG00000106282	transcribed_processed_pseudogene	Gm2287	ENSMUST00000197417	processed_transcript		5	1	86066812	1084
ENSMUSG00000115510	processed_pseudogene	Gm9334	ENSMUST00000227311	processed_pseudogene		14	-1	107526244	771
ENSMUSG00000115741	processed_pseudogene	Gm19146	ENSMUST00000228359	processed_pseudogene		14	1	107594707	818
ENSMUSG00000017286	protein_coding	Glod4	ENSMUST00000017430	protein_coding	principal1	11	-1	76243725	1434
ENSMUSG00000115273	processed_pseudogene	Gm9335	ENSMUST00000226502	processed_pseudogene		14	1	107748450	1311
ENSMUSG00000017286	protein_coding	Glod4	ENSMUST00000170017	nonsense_mediated_decay		11	-1	76243651	1195
ENSMUSG00000017286	protein_coding	Glod4	ENSMUST00000170710	protein_coding		11	-1	76243459	1445
ENSMUSG00000017286	protein_coding	Glod4	ENSMUST00000164022	protein_coding		11	-1	76243610	635
ENSMUSG00000017286	protein_coding	Glod4	ENSMUST00000167883	retained_intron		11	-1	76239572	545
ENSMUSG00000083200	processed_pseudogene	Gm15066	ENSMUST00000120163	processed_pseudogene		X	-1	144288333	2608
ENSMUSG00000059323	protein_coding	Tonsl	ENSMUST00000165163	protein_coding		15	-1	76629299	743
ENSMUSG00000017286	protein_coding	Glod4	ENSMUST00000170590	nonsense_mediated_decay		11	-1	76243669	317
ENSMUSG00000017286	protein_coding	Glod4	ENSMUST00000168055	protein_coding		11	-1	76243638	293
ENSMUSG00000116354	transcribed_unprocessed_pseudogene	Cyp2d38-ps	ENSMUST00000229532	processed_transcript		15	-1	82707353	525
ENSMUSG00000031197	protein_coding	Vbp1	ENSMUST00000114070	protein_coding		X	1	75514299	632
ENSMUSG00000116354	transcribed_unprocessed_pseudogene	Cyp2d38-ps	ENSMUST00000229065	transcribed_unprocessed_pseudogene		15	-1	82707265	549
ENSMUSG00000116354	transcribed_unprocessed_pseudogene	Cyp2d38-ps	ENSMUST00000230059	processed_transcript		15	-1	82707328	359
ENSMUSG00000049396	protein_coding	Gemin4	ENSMUST00000102500	protein_coding	principal1	11	-1	76217664	3540
ENSMUSG00000048416	protein_coding	Mlf1	ENSMUST00000077916	protein_coding	alternative2	3	1	67374097	1114
ENSMUSG00000115661	processed_pseudogene	Gm48976	ENSMUST00000227378	processed_pseudogene		14	1	107875402	1352
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000199307	retained_intron		3	1	145118600	1944
ENSMUSG00000048416	protein_coding	Mlf1	ENSMUST00000142538	processed_transcript		3	1	67374125	641
ENSMUSG00000049396	protein_coding	Gemin4	ENSMUST00000143822	processed_transcript		11	-1	76217517	234
ENSMUSG00000115562	lincRNA	Gm48977	ENSMUST00000228128	lincRNA		14	-1	108011384	624
ENSMUSG00000048416	protein_coding	Mlf1	ENSMUST00000126628	nonsense_mediated_decay		3	1	67374142	582
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000098539	protein_coding	principal3	3	1	145118600	2261
ENSMUSG00000031197	protein_coding	Vbp1	ENSMUST00000033540	protein_coding	principal1	X	1	75514299	1595
ENSMUSG00000075478	protein_coding	Slitrk1	ENSMUST00000100322	protein_coding	principal1	14	-1	108914158	5359
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000196898	retained_intron		3	1	145118608	3323
ENSMUSG00000048416	protein_coding	Mlf1	ENSMUST00000061322	protein_coding	principal4	3	1	67374148	1113
ENSMUSG00000115642	processed_pseudogene	Gm18977	ENSMUST00000227701	processed_pseudogene		14	1	109523099	998
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000186907	protein_coding		2	1	174297859	3729
ENSMUSG00000028676	protein_coding	Srsf10	ENSMUST00000105853	protein_coding	alternative1	4	1	135855747	3058
ENSMUSG00000031197	protein_coding	Vbp1	ENSMUST00000123419	retained_intron		X	1	75514317	630
ENSMUSG00000115416	processed_pseudogene	Gm7313	ENSMUST00000226328	processed_pseudogene		14	1	109566618	470
ENSMUSG00000086573	antisense	Gm15384	ENSMUST00000138832	antisense		X	1	75551117	486
ENSMUSG00000098237	processed_pseudogene	Gm7577	ENSMUST00000182543	processed_pseudogene		15	-1	54765513	982
ENSMUSG00000115336	processed_pseudogene	Gm48980	ENSMUST00000228763	processed_pseudogene		14	-1	110461671	277
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000029920	protein_coding	alternative2	3	1	145118620	2239
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000109087	protein_coding	principal1	2	1	174330089	1716
ENSMUSG00000027523	protein_coding	Gnas	ENSMUST00000180362	protein_coding		2	1	174284320	1645
ENSMUSG00000038046	protein_coding	Mrm3	ENSMUST00000040577	protein_coding	principal1	11	1	76243715	1510
ENSMUSG00000083086	processed_pseudogene	Gm15531	ENSMUST00000118062	processed_pseudogene		6	-1	97890539	252
ENSMUSG00000116117	unprocessed_pseudogene	Cyp2d39-ps	ENSMUST00000230684	unprocessed_pseudogene		15	-1	82719416	798
ENSMUSG00000059323	protein_coding	Tonsl	ENSMUST00000168185	protein_coding	principal1	15	-1	76639958	4235
ENSMUSG00000028676	protein_coding	Srsf10	ENSMUST00000097844	protein_coding	alternative1	4	1	135855747	3055
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000196552	nonsense_mediated_decay		3	1	145118621	705
ENSMUSG00000038046	protein_coding	Mrm3	ENSMUST00000125463	retained_intron		11	1	76243736	957
ENSMUSG00000038046	protein_coding	Mrm3	ENSMUST00000155526	processed_transcript		11	1	76249212	678
ENSMUSG00000116071	unprocessed_pseudogene	Gm49433	ENSMUST00000229208	unprocessed_pseudogene		15	-1	82742116	263
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000197657	processed_transcript		3	1	145118974	425
ENSMUSG00000039318	protein_coding	Rab3gap2	ENSMUST00000194740	protein_coding	alternative2	1	1	185204117	4418
ENSMUSG00000039428	protein_coding	Tmem135	ENSMUST00000041968	protein_coding	principal1	7	-1	89338787	3700
ENSMUSG00000028676	protein_coding	Srsf10	ENSMUST00000102544	protein_coding	alternative1	4	1	135855747	2225
ENSMUSG00000059323	protein_coding	Tonsl	ENSMUST00000163990	retained_intron		15	-1	76629380	502
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000199124	protein_coding		3	1	145118974	599
ENSMUSG00000059323	protein_coding	Tonsl	ENSMUST00000171478	processed_transcript		15	-1	76633676	713
ENSMUSG00000115606	processed_pseudogene	Gm17932	ENSMUST00000227481	processed_pseudogene		14	1	110556420	584
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000196857	protein_coding		3	1	145120646	701
ENSMUSG00000039428	protein_coding	Tmem135	ENSMUST00000156153	retained_intron		7	-1	89154300	696
ENSMUSG00000035024	protein_coding	Ncapd3	ENSMUST00000217311	retained_intron		9	1	27030179	3952
ENSMUSG00000039428	protein_coding	Tmem135	ENSMUST00000207335	retained_intron		7	-1	89145497	1558
ENSMUSG00000028676	protein_coding	Srsf10	ENSMUST00000126641	protein_coding	principal3	4	1	135855747	3754
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000198764	protein_coding		3	1	145127857	764
ENSMUSG00000031202	protein_coding	Rab39b	ENSMUST00000033545	protein_coding	principal1	X	-1	75578231	3401
ENSMUSG00000043190	protein_coding	Rfesd	ENSMUST00000050997	protein_coding	principal1	13	-1	76018562	2807
ENSMUSG00000059323	protein_coding	Tonsl	ENSMUST00000165190	nonsense_mediated_decay		15	-1	76639929	2932
ENSMUSG00000039428	protein_coding	Tmem135	ENSMUST00000117852	protein_coding		7	-1	89338760	2986
ENSMUSG00000039318	protein_coding	Rab3gap2	ENSMUST00000069652	protein_coding	principal2	1	1	185204117	7052
ENSMUSG00000059323	protein_coding	Tonsl	ENSMUST00000163161	retained_intron		15	-1	76638279	491
ENSMUSG00000022040	protein_coding	Ephx2	ENSMUST00000224698	protein_coding		14	-1	66112386	1985
ENSMUSG00000039318	protein_coding	Rab3gap2	ENSMUST00000191966	retained_intron		1	1	185204178	2277
ENSMUSG00000059323	protein_coding	Tonsl	ENSMUST00000168432	retained_intron		15	-1	76639638	420
ENSMUSG00000086937	antisense	Gm15063	ENSMUST00000152648	antisense		X	1	75573452	895
ENSMUSG00000039428	protein_coding	Tmem135	ENSMUST00000136267	processed_transcript		7	-1	89159617	388
ENSMUSG00000059323	protein_coding	Tonsl	ENSMUST00000166974	protein_coding		15	-1	76639840	471
ENSMUSG00000045871	protein_coding	Slitrk6	ENSMUST00000078386	protein_coding	principal1	14	-1	110755149	4240
ENSMUSG00000022040	protein_coding	Ephx2	ENSMUST00000225309	protein_coding		14	-1	66110660	2032
ENSMUSG00000039428	protein_coding	Tmem135	ENSMUST00000124477	processed_transcript		7	-1	89404222	756
ENSMUSG00000043190	protein_coding	Rfesd	ENSMUST00000179078	protein_coding	principal1	13	-1	76018670	1436
ENSMUSG00000039428	protein_coding	Tmem135	ENSMUST00000139320	processed_transcript		7	-1	89298290	280
ENSMUSG00000115165	processed_pseudogene	Gm48987	ENSMUST00000227765	processed_pseudogene		14	-1	110765267	222
ENSMUSG00000039318	protein_coding	Rab3gap2	ENSMUST00000195042	retained_intron		1	1	185263679	1981
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000199045	retained_intron		3	1	145132616	913
ENSMUSG00000039428	protein_coding	Tmem135	ENSMUST00000154434	retained_intron		7	-1	89338691	659
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000196426	retained_intron		3	1	145139575	674
ENSMUSG00000115987	protein_coding	Vps28	ENSMUST00000229545	retained_intron		15	-1	76626069	1136
ENSMUSG00000039428	protein_coding	Tmem135	ENSMUST00000137723	protein_coding		7	-1	89338737	490
ENSMUSG00000039318	protein_coding	Rab3gap2	ENSMUST00000193482	retained_intron		1	1	185263842	3245
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000200014	processed_transcript		3	1	145139784	740
ENSMUSG00000115349	processed_pseudogene	Gm9348	ENSMUST00000228159	processed_pseudogene		14	1	110779228	984
ENSMUSG00000028676	protein_coding	Srsf10	ENSMUST00000030438	processed_transcript		4	1	135855878	2493
ENSMUSG00000022040	protein_coding	Ephx2	ENSMUST00000070515	protein_coding	principal1	14	-1	66124500	2035
ENSMUSG00000039318	protein_coding	Rab3gap2	ENSMUST00000195534	retained_intron		1	1	185277798	614
ENSMUSG00000028676	protein_coding	Srsf10	ENSMUST00000154447	processed_transcript		4	1	135856112	677
ENSMUSG00000115987	protein_coding	Vps28	ENSMUST00000229052	retained_intron		15	-1	76626053	2148
ENSMUSG00000109327	antisense	Gm44995	ENSMUST00000207056	antisense		7	1	89338370	504
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000198808	retained_intron		3	1	145139793	3747
ENSMUSG00000028676	protein_coding	Srsf10	ENSMUST00000129718	processed_transcript		4	1	135856132	717
ENSMUSG00000115461	processed_pseudogene	Gm48988	ENSMUST00000227007	processed_pseudogene		14	-1	111350233	445
ENSMUSG00000115987	protein_coding	Vps28	ENSMUST00000229261	retained_intron		15	-1	76626086	1631
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000195926	protein_coding		3	1	145139815	464
ENSMUSG00000028676	protein_coding	Srsf10	ENSMUST00000149878	processed_transcript		4	1	135861788	394
ENSMUSG00000109576	TEC	Gm44704	ENSMUST00000208963	TEC		7	-1	89217097	1990
ENSMUSG00000028676	protein_coding	Srsf10	ENSMUST00000129198	processed_transcript		4	1	135861820	522
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000200353	nonsense_mediated_decay		3	1	145149018	485
ENSMUSG00000115650	lincRNA	Gm48992	ENSMUST00000226491	lincRNA		14	-1	111433312	1101
ENSMUSG00000043190	protein_coding	Rfesd	ENSMUST00000167271	protein_coding	principal1	13	-1	76018719	595
ENSMUSG00000028676	protein_coding	Srsf10	ENSMUST00000142002	processed_transcript		4	1	135863295	423
ENSMUSG00000109199	TEC	Gm44996	ENSMUST00000208787	TEC		7	-1	89391323	2980
ENSMUSG00000115755	processed_pseudogene	Gm48993	ENSMUST00000228532	processed_pseudogene		14	-1	111466678	310
ENSMUSG00000028256	protein_coding	Odf2l	ENSMUST00000106192	protein_coding	principal3	3	1	145118589	2425
ENSMUSG00000043190	protein_coding	Rfesd	ENSMUST00000224093	retained_intron		13	-1	76018468	1429
ENSMUSG00000115818	processed_pseudogene	Gm18580	ENSMUST00000227161	processed_pseudogene		14	1	111544201	892
ENSMUSG00000111174	protein_coding	Olfr1240	ENSMUST00000216123	protein_coding	principal1	2	-1	89443000	4603
ENSMUSG00000082783	unprocessed_pseudogene	Gm9126	ENSMUST00000117072	unprocessed_pseudogene		X	1	102818362	416
ENSMUSG00000028784	protein_coding	Spocd1	ENSMUST00000084263	protein_coding	principal1	4	1	129929249	3096
ENSMUSG00000115987	protein_coding	Vps28	ENSMUST00000229019	protein_coding		15	-1	76626006	941
ENSMUSG00000111174	protein_coding	Olfr1240	ENSMUST00000215362	protein_coding	principal1	2	-1	89440343	1074
ENSMUSG00000081240	unprocessed_pseudogene	Gm16511	ENSMUST00000120019	unprocessed_pseudogene		X	1	102830950	564
ENSMUSG00000028784	protein_coding	Spocd1	ENSMUST00000128007	protein_coding		4	1	129947547	626
ENSMUSG00000105613	TEC	Gm43684	ENSMUST00000199279	TEC		5	1	122779525	6573
ENSMUSG00000115987	protein_coding	Vps28	ENSMUST00000078803	protein_coding	principal1	15	-1	76626074	911
ENSMUSG00000033214	protein_coding	Slitrk5	ENSMUST00000042767	protein_coding	principal1	14	1	111675097	4831
ENSMUSG00000033214	protein_coding	Slitrk5	ENSMUST00000227891	protein_coding		14	1	111675849	837
ENSMUSG00000075086	protein_coding	Olfr1241	ENSMUST00000214743	protein_coding	principal1	2	-1	89487126	2328
ENSMUSG00000118561	processed_pseudogene	AC102368.2	ENSMUST00000238928	processed_pseudogene		14	1	111710078	427
ENSMUSG00000035842	protein_coding	Ddx11	ENSMUST00000225956	protein_coding		17	1	66123520	681
ENSMUSG00000075086	protein_coding	Olfr1241	ENSMUST00000215055	protein_coding	principal1	2	-1	89487125	2441
ENSMUSG00000089767	antisense	4930556I23Rik	ENSMUST00000160659	antisense		1	1	37614259	560
ENSMUSG00000118534	processed_pseudogene	AC102368.1	ENSMUST00000238868	processed_pseudogene		14	1	111710598	174
ENSMUSG00000102650	TEC	Gm19863	ENSMUST00000192480	TEC		1	-1	37696664	2218
ENSMUSG00000075086	protein_coding	Olfr1241	ENSMUST00000099778	protein_coding	principal1	2	-1	89483133	945
ENSMUSG00000067561	protein_coding	Dmrtc1c2	ENSMUST00000087896	protein_coding	alternative2	X	-1	102853356	1255
ENSMUSG00000115663	processed_pseudogene	Gm48999	ENSMUST00000227814	processed_pseudogene		14	1	111949264	1015
ENSMUSG00000115558	TEC	Gm49000	ENSMUST00000227711	TEC		14	-1	112031238	1597
ENSMUSG00000067561	protein_coding	Dmrtc1c2	ENSMUST00000120314	protein_coding	principal3	X	-1	102854616	1611
ENSMUSG00000115581	processed_pseudogene	Gm20127	ENSMUST00000228614	processed_pseudogene		14	-1	112329175	458
ENSMUSG00000067561	protein_coding	Dmrtc1c2	ENSMUST00000087899	protein_coding	principal3	X	-1	102854138	717
ENSMUSG00000027887	protein_coding	Sypl2	ENSMUST00000141387	protein_coding	principal1	3	-1	108226648	4090
ENSMUSG00000058953	processed_pseudogene	Gm4822	ENSMUST00000077551	processed_pseudogene		14	1	112481367	479
ENSMUSG00000027887	protein_coding	Sypl2	ENSMUST00000156371	retained_intron		3	-1	108226643	969
ENSMUSG00000026090	protein_coding	2010300C02Rik	ENSMUST00000160023	protein_coding		1	-1	37625242	2538
ENSMUSG00000115126	processed_pseudogene	Gm19223	ENSMUST00000227657	processed_pseudogene		14	-1	112580551	1687
ENSMUSG00000022883	protein_coding	Robo1	ENSMUST00000231580	protein_coding		16	1	72308306	546
ENSMUSG00000115786	processed_pseudogene	Gm4486	ENSMUST00000227924	processed_pseudogene		14	1	112957368	734
ENSMUSG00000115260	processed_pseudogene	Gm49005	ENSMUST00000227945	processed_pseudogene		14	1	113128821	373
ENSMUSG00000099609	TEC	Gm29008	ENSMUST00000189387	TEC		6	-1	124717944	298
ENSMUSG00000087327	antisense	Gm15884	ENSMUST00000143765	antisense		6	-1	124718831	643
ENSMUSG00000035842	protein_coding	Ddx11	ENSMUST00000223600	retained_intron		17	1	66123556	576
ENSMUSG00000058126	protein_coding	Tpm3-rs7	ENSMUST00000072359	protein_coding	principal1	14	1	113314608	2147
ENSMUSG00000035842	protein_coding	Ddx11	ENSMUST00000225687	retained_intron		17	1	66123571	4480
ENSMUSG00000026090	protein_coding	2010300C02Rik	ENSMUST00000162875	protein_coding	principal1	1	-1	37720085	4634
ENSMUSG00000086415	processed_pseudogene	Gm4487	ENSMUST00000150617	processed_pseudogene		14	-1	113490660	442
ENSMUSG00000004264	protein_coding	Phb2	ENSMUST00000150847	retained_intron		6	1	124712336	593
ENSMUSG00000004264	protein_coding	Phb2	ENSMUST00000124779	retained_intron		6	1	124712336	1122
ENSMUSG00000026090	protein_coding	2010300C02Rik	ENSMUST00000160589	protein_coding		1	-1	37719795	788
ENSMUSG00000032894	protein_coding	1700031F05Rik	ENSMUST00000048061	protein_coding	principal1	X	-1	102866353	1361
ENSMUSG00000104365	TEC	4930470B04Rik	ENSMUST00000192005	TEC		1	1	37660722	1926
ENSMUSG00000032894	protein_coding	1700031F05Rik	ENSMUST00000124592	nonsense_mediated_decay		X	-1	102867971	890
ENSMUSG00000035842	protein_coding	Ddx11	ENSMUST00000224903	nonsense_mediated_decay		17	1	66123589	3520
ENSMUSG00000114366	processed_pseudogene	Gm4165	ENSMUST00000224650	processed_pseudogene		13	-1	76020110	304
ENSMUSG00000084397	unprocessed_pseudogene	Gm9133	ENSMUST00000118289	unprocessed_pseudogene		X	-1	102882254	540
ENSMUSG00000045509	protein_coding	Gpr150	ENSMUST00000056130	protein_coding	principal1	13	-1	76056996	2146
ENSMUSG00000032026	protein_coding	Rexo2	ENSMUST00000034524	protein_coding	principal1	9	-1	48480611	1077
ENSMUSG00000032026	protein_coding	Rexo2	ENSMUST00000216142	retained_intron		9	-1	48472220	462
ENSMUSG00000032026	protein_coding	Rexo2	ENSMUST00000214929	retained_intron		9	-1	48473586	707
ENSMUSG00000032026	protein_coding	Rexo2	ENSMUST00000213895	protein_coding		9	-1	48480623	492
ENSMUSG00000035842	protein_coding	Ddx11	ENSMUST00000224497	protein_coding	alternative2	17	1	66123613	4141
ENSMUSG00000032026	protein_coding	Rexo2	ENSMUST00000213875	retained_intron		9	-1	48474511	246
ENSMUSG00000035842	protein_coding	Ddx11	ENSMUST00000223805	retained_intron		17	1	66138413	662
ENSMUSG00000035842	protein_coding	Ddx11	ENSMUST00000223801	retained_intron		17	1	66138925	805
ENSMUSG00000035842	protein_coding	Ddx11	ENSMUST00000226095	retained_intron		17	1	66143709	618
ENSMUSG00000035842	protein_coding	Ddx11	ENSMUST00000163605	protein_coding	principal2	17	1	66123520	4149
ENSMUSG00000032026	protein_coding	Rexo2	ENSMUST00000213508	retained_intron		9	-1	48480615	1780
ENSMUSG00000032026	protein_coding	Rexo2	ENSMUST00000217037	protein_coding		9	-1	48480590	609
ENSMUSG00000032026	protein_coding	Rexo2	ENSMUST00000216624	retained_intron		9	-1	48480606	693
ENSMUSG00000082551	processed_pseudogene	Gm15065	ENSMUST00000121699	processed_pseudogene		X	1	75705409	273
ENSMUSG00000032026	protein_coding	Rexo2	ENSMUST00000216470	protein_coding		9	-1	48480579	454
ENSMUSG00000032026	protein_coding	Rexo2	ENSMUST00000214161	retained_intron		9	-1	48480593	553
ENSMUSG00000021194	protein_coding	Chga	ENSMUST00000021610	protein_coding	principal1	12	1	102554969	1883
ENSMUSG00000082832	processed_pseudogene	Gm14786	ENSMUST00000117127	processed_pseudogene		X	-1	91271319	944
ENSMUSG00000081996	processed_pseudogene	Gm7153	ENSMUST00000117092	processed_pseudogene		X	1	75723672	455
ENSMUSG00000021194	protein_coding	Chga	ENSMUST00000220839	retained_intron		12	1	102554986	707
ENSMUSG00000021194	protein_coding	Chga	ENSMUST00000223100	retained_intron		12	1	102558068	692
ENSMUSG00000080765	processed_pseudogene	Gm8908	ENSMUST00000121633	processed_pseudogene		X	-1	91286791	1024
ENSMUSG00000081235	processed_pseudogene	Gm14788	ENSMUST00000119457	processed_pseudogene		X	1	91289277	375
ENSMUSG00000035847	protein_coding	Ids	ENSMUST00000101509	protein_coding	principal1	X	-1	70365084	4972
ENSMUSG00000035847	protein_coding	Ids	ENSMUST00000130519	protein_coding		X	-1	70361091	708
ENSMUSG00000032313	protein_coding	Tmem266	ENSMUST00000085754	protein_coding	alternative2	9	1	55326913	4417
ENSMUSG00000073069	protein_coding	Mageb2	ENSMUST00000201779	protein_coding	principal2	X	1	91331690	1551
ENSMUSG00000004264	protein_coding	Phb2	ENSMUST00000004375	protein_coding	principal1	6	1	124712336	1318
ENSMUSG00000022883	protein_coding	Robo1	ENSMUST00000232205	protein_coding		16	1	72563700	6601
ENSMUSG00000073069	protein_coding	Mageb2	ENSMUST00000101397	protein_coding	alternative2	X	1	91331755	1143
ENSMUSG00000032313	protein_coding	Tmem266	ENSMUST00000034862	protein_coding	principal2	9	1	55326949	2408
ENSMUSG00000083926	processed_pseudogene	Gm14783	ENSMUST00000118900	processed_pseudogene		X	1	91345675	663
ENSMUSG00000022883	protein_coding	Robo1	ENSMUST00000023600	protein_coding	principal1	16	1	72663149	7563
ENSMUSG00000032313	protein_coding	Tmem266	ENSMUST00000130465	processed_transcript		9	1	55333201	526
ENSMUSG00000004264	protein_coding	Phb2	ENSMUST00000145447	retained_intron		6	1	124712336	2373
ENSMUSG00000022883	protein_coding	Robo1	ENSMUST00000231474	retained_intron		16	1	72663184	2277
ENSMUSG00000004264	protein_coding	Phb2	ENSMUST00000147974	protein_coding		6	1	124712766	313
ENSMUSG00000022883	protein_coding	Robo1	ENSMUST00000231265	processed_transcript		16	1	72663204	3834
ENSMUSG00000087396	processed_transcript	4933407K13Rik	ENSMUST00000138943	processed_transcript		X	-1	75764699	4364
ENSMUSG00000022883	protein_coding	Robo1	ENSMUST00000232545	retained_intron		16	1	72976349	2118
ENSMUSG00000004264	protein_coding	Phb2	ENSMUST00000130279	protein_coding		6	1	124713122	479
ENSMUSG00000087396	processed_transcript	4933407K13Rik	ENSMUST00000151267	processed_transcript		X	-1	75710705	693
ENSMUSG00000087396	processed_transcript	4933407K13Rik	ENSMUST00000130744	processed_transcript		X	-1	75764699	3369
ENSMUSG00000022883	protein_coding	Robo1	ENSMUST00000232264	retained_intron		16	1	72978730	2416
ENSMUSG00000087396	processed_transcript	4933407K13Rik	ENSMUST00000129980	processed_transcript		X	-1	75755601	1243
ENSMUSG00000004264	protein_coding	Phb2	ENSMUST00000143000	retained_intron		6	1	124715348	734
ENSMUSG00000022883	protein_coding	Robo1	ENSMUST00000231566	retained_intron		16	1	72983755	406
ENSMUSG00000087396	processed_transcript	4933407K13Rik	ENSMUST00000140409	processed_transcript		X	-1	75755600	839
ENSMUSG00000004264	protein_coding	Phb2	ENSMUST00000129422	processed_transcript		6	1	124715363	489
ENSMUSG00000030987	protein_coding	Stim1	ENSMUST00000033289	protein_coding	principal2	7	1	102267806	4085
ENSMUSG00000022883	protein_coding	Robo1	ENSMUST00000232432	retained_intron		16	1	73006421	2326
ENSMUSG00000030987	protein_coding	Stim1	ENSMUST00000211141	retained_intron		7	1	102267812	3837
ENSMUSG00000116910	processed_pseudogene	Gm49670	ENSMUST00000232381	processed_pseudogene		16	-1	72372441	343
ENSMUSG00000030987	protein_coding	Stim1	ENSMUST00000210266	retained_intron		7	1	102267819	2504
ENSMUSG00000055799	protein_coding	Tcf7l1	ENSMUST00000069536	protein_coding	principal3	6	-1	72789254	3042
ENSMUSG00000030987	protein_coding	Stim1	ENSMUST00000209255	protein_coding		7	1	102267854	4362
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000070801	protein_coding	principal1	X	1	144317804	1802
ENSMUSG00000042448	protein_coding	Hoxd1	ENSMUST00000047793	protein_coding	principal1	2	1	74762980	1862
ENSMUSG00000055799	protein_coding	Tcf7l1	ENSMUST00000114053	protein_coding	alternative2	6	-1	72788952	1888
ENSMUSG00000030987	protein_coding	Stim1	ENSMUST00000211457	protein_coding	alternative1	7	1	102268327	2183
ENSMUSG00000030987	protein_coding	Stim1	ENSMUST00000210834	retained_intron		7	1	102425973	1436
ENSMUSG00000055799	protein_coding	Tcf7l1	ENSMUST00000141743	processed_transcript		6	-1	72630270	518
ENSMUSG00000055799	protein_coding	Tcf7l1	ENSMUST00000149446	protein_coding		6	-1	72788598	463
ENSMUSG00000030987	protein_coding	Stim1	ENSMUST00000211058	protein_coding		7	1	102425996	619
ENSMUSG00000055799	protein_coding	Tcf7l1	ENSMUST00000182651	processed_transcript		6	-1	72671404	713
ENSMUSG00000030987	protein_coding	Stim1	ENSMUST00000210761	retained_intron		7	1	102426552	483
ENSMUSG00000030987	protein_coding	Stim1	ENSMUST00000210544	retained_intron		7	1	102430751	494
ENSMUSG00000072999	antisense	Gm15401	ENSMUST00000156497	antisense		6	1	72629288	378
ENSMUSG00000072999	antisense	Gm15401	ENSMUST00000081929	antisense		6	1	72629837	1107
ENSMUSG00000072999	antisense	Gm15401	ENSMUST00000101278	antisense		6	1	72636253	926
ENSMUSG00000027480	protein_coding	Sun5	ENSMUST00000028982	protein_coding	principal1	2	-1	153871084	1157
ENSMUSG00000102983	TEC	Gm38320	ENSMUST00000192767	TEC		6	1	72652320	1281
ENSMUSG00000102931	TEC	Gm38114	ENSMUST00000191877	TEC		6	-1	72644085	1232
ENSMUSG00000110175	processed_pseudogene	Gm18255	ENSMUST00000211316	processed_pseudogene		7	-1	102378337	765
ENSMUSG00000105540	processed_pseudogene	Gm7988	ENSMUST00000196623	processed_pseudogene		5	-1	49902302	2297
ENSMUSG00000104634	TEC	Gm42461	ENSMUST00000198627	TEC		5	-1	49944558	1150
ENSMUSG00000075085	protein_coding	Olfr1242	ENSMUST00000111540	protein_coding	principal1	2	-1	89498213	2189
ENSMUSG00000027480	protein_coding	Sun5	ENSMUST00000124414	processed_transcript		2	-1	153871084	462
ENSMUSG00000027480	protein_coding	Sun5	ENSMUST00000129011	processed_transcript		2	-1	153871084	519
ENSMUSG00000075085	protein_coding	Olfr1242	ENSMUST00000216001	protein_coding	principal1	2	-1	89498213	2569
ENSMUSG00000075085	protein_coding	Olfr1242	ENSMUST00000143935	protein_coding	principal1	2	-1	89498335	2406
ENSMUSG00000075085	protein_coding	Olfr1242	ENSMUST00000099777	protein_coding	principal1	2	-1	89494346	1053
ENSMUSG00000057182	protein_coding	Scn3a	ENSMUST00000100069	protein_coding	principal1	2	-1	65567627	8550
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000238864	protein_coding		X	1	144317804	4191
ENSMUSG00000057182	protein_coding	Scn3a	ENSMUST00000238409	nonsense_mediated_decay		2	-1	65495231	597
ENSMUSG00000057182	protein_coding	Scn3a	ENSMUST00000155838	processed_transcript		2	-1	65498599	3502
ENSMUSG00000057182	protein_coding	Scn3a	ENSMUST00000238417	protein_coding		2	-1	65520895	1284
ENSMUSG00000057182	protein_coding	Scn3a	ENSMUST00000238512	nonsense_mediated_decay		2	-1	65524658	1596
ENSMUSG00000005672	protein_coding	Kit	ENSMUST00000144270	protein_coding	alternative2	5	1	75574916	5241
ENSMUSG00000057182	protein_coding	Scn3a	ENSMUST00000238483	protein_coding		2	-1	65567551	2978
ENSMUSG00000057182	protein_coding	Scn3a	ENSMUST00000126837	protein_coding		2	-1	65529404	365
ENSMUSG00000062006	protein_coding	Rpl34	ENSMUST00000062601	protein_coding	principal1	3	-1	130730337	624
ENSMUSG00000057182	protein_coding	Scn3a	ENSMUST00000066432	protein_coding	principal1	2	-1	65567492	9560
ENSMUSG00000032352	protein_coding	Lrrc1	ENSMUST00000183873	protein_coding	principal1	9	-1	77544870	3121
ENSMUSG00000062006	protein_coding	Rpl34	ENSMUST00000199001	retained_intron		3	-1	130727406	573
ENSMUSG00000086701	antisense	Gm13595	ENSMUST00000145994	antisense		2	1	65509265	494
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000223663	protein_coding	principal1	14	1	20294697	1633
ENSMUSG00000062006	protein_coding	Rpl34	ENSMUST00000079085	protein_coding	principal1	3	-1	130730398	480
ENSMUSG00000032352	protein_coding	Lrrc1	ENSMUST00000113421	protein_coding		9	-1	77544095	2630
ENSMUSG00000005672	protein_coding	Kit	ENSMUST00000005815	protein_coding	principal3	5	1	75574955	5214
ENSMUSG00000062006	protein_coding	Rpl34	ENSMUST00000135691	retained_intron		3	-1	130730342	477
ENSMUSG00000062006	protein_coding	Rpl34	ENSMUST00000196202	protein_coding		3	-1	130730321	495
ENSMUSG00000005672	protein_coding	Kit	ENSMUST00000143221	retained_intron		5	1	75610574	648
ENSMUSG00000032352	protein_coding	Lrrc1	ENSMUST00000183467	nonsense_mediated_decay		9	-1	77442195	1477
ENSMUSG00000005672	protein_coding	Kit	ENSMUST00000151357	retained_intron		5	1	75637115	354
ENSMUSG00000062006	protein_coding	Rpl34	ENSMUST00000133802	protein_coding		3	-1	130730334	711
ENSMUSG00000032352	protein_coding	Lrrc1	ENSMUST00000184099	retained_intron		9	-1	77442491	383
ENSMUSG00000005672	protein_coding	Kit	ENSMUST00000136002	retained_intron		5	1	75641083	392
ENSMUSG00000062006	protein_coding	Rpl34	ENSMUST00000199911	retained_intron		3	-1	130730347	766
ENSMUSG00000032352	protein_coding	Lrrc1	ENSMUST00000183734	protein_coding		9	-1	77544850	2113
ENSMUSG00000005672	protein_coding	Kit	ENSMUST00000148993	retained_intron		5	1	75645697	842
ENSMUSG00000062006	protein_coding	Rpl34	ENSMUST00000200517	protein_coding		3	-1	130730346	1232
ENSMUSG00000032352	protein_coding	Lrrc1	ENSMUST00000183572	processed_transcript		9	-1	77532444	355
ENSMUSG00000005672	protein_coding	Kit	ENSMUST00000202167	retained_intron		5	1	75649094	3175
ENSMUSG00000032352	protein_coding	Lrrc1	ENSMUST00000184811	processed_transcript		9	-1	77544848	463
ENSMUSG00000005672	protein_coding	Kit	ENSMUST00000201240	retained_intron		5	1	75649193	3104
ENSMUSG00000032352	protein_coding	Lrrc1	ENSMUST00000183980	retained_intron		9	-1	77544790	4275
ENSMUSG00000112414	lincRNA	Gm34609	ENSMUST00000219284	lincRNA		10	1	72026982	789
ENSMUSG00000094861	protein_coding	Gm5072	ENSMUST00000063726	protein_coding	principal1	X	1	91392500	1035
ENSMUSG00000053830	processed_pseudogene	Gm9923	ENSMUST00000217785	processed_pseudogene		10	1	72309321	1836
ENSMUSG00000096072	protein_coding	Gm8914	ENSMUST00000101396	protein_coding	principal1	X	1	91480126	1035
ENSMUSG00000020790	protein_coding	Ankfy1	ENSMUST00000102548	processed_transcript		11	1	72712157	3324
ENSMUSG00000042396	protein_coding	Rbm7	ENSMUST00000213276	protein_coding		9	-1	48495294	2629
ENSMUSG00000028610	protein_coding	Dmrtb1	ENSMUST00000131776	protein_coding		4	-1	107683580	1327
ENSMUSG00000042396	protein_coding	Rbm7	ENSMUST00000170000	protein_coding	principal1	9	-1	48495297	1773
ENSMUSG00000028610	protein_coding	Dmrtb1	ENSMUST00000069271	protein_coding	principal1	4	-1	107684230	1861
ENSMUSG00000042396	protein_coding	Rbm7	ENSMUST00000214923	nonsense_mediated_decay		9	-1	48495294	1867
ENSMUSG00000042396	protein_coding	Rbm7	ENSMUST00000213525	retained_intron		9	-1	48495299	2703
ENSMUSG00000028610	protein_coding	Dmrtb1	ENSMUST00000131508	retained_intron		4	-1	107680960	704
ENSMUSG00000081916	processed_pseudogene	Gm12899	ENSMUST00000120565	processed_pseudogene		4	1	107688128	551
ENSMUSG00000022451	protein_coding	Twf1	ENSMUST00000023087	protein_coding	principal1	15	-1	94589879	3025
ENSMUSG00000105716	lincRNA	Gm43522	ENSMUST00000200185	lincRNA		3	1	130759265	442
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000225722	processed_transcript		14	1	20294714	2473
ENSMUSG00000105716	lincRNA	Gm43522	ENSMUST00000196697	lincRNA		3	1	130760190	1922
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000225354	processed_transcript		14	1	20294715	681
ENSMUSG00000022451	protein_coding	Twf1	ENSMUST00000155654	processed_transcript		15	-1	94585475	814
ENSMUSG00000106260	processed_pseudogene	Gm43524	ENSMUST00000197278	processed_pseudogene		3	1	130757461	298
ENSMUSG00000022451	protein_coding	Twf1	ENSMUST00000127347	retained_intron		15	-1	94581386	216
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000022343	protein_coding	principal1	14	1	20294722	2494
ENSMUSG00000022451	protein_coding	Twf1	ENSMUST00000152590	protein_coding		15	-1	94589889	456
ENSMUSG00000105789	lincRNA	Gm42997	ENSMUST00000200321	lincRNA		3	1	130730460	985
ENSMUSG00000105789	lincRNA	Gm42997	ENSMUST00000196074	lincRNA		3	1	130730601	918
ENSMUSG00000036568	protein_coding	Bicral	ENSMUST00000040624	protein_coding	principal1	17	-1	46831413	6575
ENSMUSG00000080863	processed_pseudogene	Gm14787	ENSMUST00000121236	processed_pseudogene		X	-1	91545225	388
ENSMUSG00000036568	protein_coding	Bicral	ENSMUST00000233537	protein_coding	principal1	17	-1	46832314	3685
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000224066	protein_coding		14	1	20294723	670
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000223941	protein_coding		14	1	20294723	793
ENSMUSG00000036568	protein_coding	Bicral	ENSMUST00000233142	processed_transcript		17	-1	46812185	566
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000224311	protein_coding		14	1	20294736	1574
ENSMUSG00000036568	protein_coding	Bicral	ENSMUST00000233455	protein_coding		17	-1	46858482	540
ENSMUSG00000042293	protein_coding	Gm5617	ENSMUST00000048824	protein_coding	principal1	9	1	48495442	531
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000224354	retained_intron		14	1	20294740	2815
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000225440	retained_intron		14	1	20294742	695
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000224674	retained_intron		14	1	20294744	744
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000225314	nonsense_mediated_decay		14	1	20294746	1589
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000224377	retained_intron		14	1	20294748	976
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000224169	nonsense_mediated_decay		14	1	20294767	857
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000225442	retained_intron		14	1	20300502	897
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000223566	retained_intron		14	1	20310490	597
ENSMUSG00000021809	protein_coding	Nudt13	ENSMUST00000225728	retained_intron		14	1	20311429	375
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000197316	nonsense_mediated_decay		X	1	144318000	3839
ENSMUSG00000035024	protein_coding	Ncapd3	ENSMUST00000216677	protein_coding	principal2	9	1	27030649	5149
ENSMUSG00000066688	protein_coding	Gm13083	ENSMUST00000105773	protein_coding	principal1	4	1	143615003	2464
ENSMUSG00000059883	protein_coding	Irak4	ENSMUST00000074936	protein_coding	principal1	15	1	94543643	2831
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000123710	protein_coding		X	1	144318003	604
ENSMUSG00000020790	protein_coding	Ankfy1	ENSMUST00000127610	nonsense_mediated_decay		11	1	72690006	7154
ENSMUSG00000059883	protein_coding	Irak4	ENSMUST00000138306	retained_intron		15	1	94543653	1159
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000149330	protein_coding		X	1	144318003	479
ENSMUSG00000035024	protein_coding	Ncapd3	ENSMUST00000214432	processed_transcript		9	1	27074333	2077
ENSMUSG00000020790	protein_coding	Ankfy1	ENSMUST00000147195	retained_intron		11	1	72759916	742
ENSMUSG00000035024	protein_coding	Ncapd3	ENSMUST00000214270	processed_transcript		9	1	27074360	756
ENSMUSG00000059883	protein_coding	Irak4	ENSMUST00000109248	protein_coding		15	1	94543672	3437
ENSMUSG00000020790	protein_coding	Ankfy1	ENSMUST00000132889	retained_intron		11	1	72764467	642
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000145724	nonsense_mediated_decay		X	1	144318003	859
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000198039	nonsense_mediated_decay		X	1	144318018	3307
ENSMUSG00000035024	protein_coding	Ncapd3	ENSMUST00000073127	protein_coding	principal2	9	1	27030175	5499
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000144185	processed_transcript		X	1	144318023	476
ENSMUSG00000099094	processed_transcript	Gm19569	ENSMUST00000184658	lincRNA		9	1	77544959	1305
ENSMUSG00000099094	processed_transcript	Gm19569	ENSMUST00000184563	retained_intron		9	1	77545202	1266
ENSMUSG00000087129	antisense	Gm16316	ENSMUST00000154065	antisense		2	-1	163692279	3393
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000154827	nonsense_mediated_decay		X	1	144318023	4168
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000040338	processed_transcript		X	1	144335869	508
ENSMUSG00000098895	processed_pseudogene	Gm21013	ENSMUST00000184952	processed_pseudogene		9	-1	77553833	1201
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000197138	retained_intron		X	1	144336494	877
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000149427	processed_transcript		X	1	144339005	2996
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000199040	retained_intron		X	1	144340436	719
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000132416	processed_transcript		X	1	144346735	2608
ENSMUSG00000041718	protein_coding	Alg13	ENSMUST00000149811	processed_transcript		X	1	144356878	619
ENSMUSG00000080922	processed_pseudogene	Gm2214	ENSMUST00000121333	processed_pseudogene		X	-1	144321255	330
ENSMUSG00000035024	protein_coding	Ncapd3	ENSMUST00000086198	protein_coding	alternative2	9	1	27030175	4675
ENSMUSG00000115269	processed_pseudogene	Gm5209	ENSMUST00000226804	processed_pseudogene		14	1	113902027	720
ENSMUSG00000044938	protein_coding	Klhl31	ENSMUST00000057781	protein_coding	principal1	9	1	77636500	6494
ENSMUSG00000115572	processed_pseudogene	Gm18369	ENSMUST00000227752	processed_pseudogene		14	1	114172443	574
ENSMUSG00000110838	lincRNA	Gm47789	ENSMUST00000214443	lincRNA		9	-1	77707882	443
ENSMUSG00000115658	processed_pseudogene	Gm19829	ENSMUST00000226772	processed_pseudogene		14	-1	114310803	2104
ENSMUSG00000111225	lincRNA	Gm47790	ENSMUST00000215521	lincRNA		9	-1	77730279	399
ENSMUSG00000103140	TEC	Gm37495	ENSMUST00000194590	TEC		14	-1	114821225	264
ENSMUSG00000031731	protein_coding	Ap1g1	ENSMUST00000093157	protein_coding	principal3	8	1	109778554	6899
ENSMUSG00000004462	protein_coding	Tbccd1	ENSMUST00000004576	protein_coding	principal1	16	-1	22857669	2803
ENSMUSG00000111014	lincRNA	Gm47795	ENSMUST00000215539	lincRNA		9	-1	77733268	519
ENSMUSG00000115320	lincRNA	4930524C18Rik	ENSMUST00000226121	lincRNA		14	1	114831965	1895
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000056601	protein_coding	principal1	11	-1	76179647	2833
ENSMUSG00000031731	protein_coding	Ap1g1	ENSMUST00000173200	processed_transcript		8	1	109778897	466
ENSMUSG00000004462	protein_coding	Tbccd1	ENSMUST00000232075	protein_coding	principal1	16	-1	22857667	2645
ENSMUSG00000115309	lincRNA	Gm49010	ENSMUST00000226159	lincRNA		14	-1	114876510	793
ENSMUSG00000031731	protein_coding	Ap1g1	ENSMUST00000034171	protein_coding	alternative1	8	1	109778906	3692
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000108419	protein_coding		11	-1	76179624	2209
ENSMUSG00000004462	protein_coding	Tbccd1	ENSMUST00000231229	nonsense_mediated_decay		16	-1	22818525	580
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000094015	protein_coding		11	-1	76179617	2645
ENSMUSG00000031731	protein_coding	Ap1g1	ENSMUST00000172892	retained_intron		8	1	109843118	441
ENSMUSG00000115372	lincRNA	1700100I10Rik	ENSMUST00000227125	lincRNA		14	-1	114945948	836
ENSMUSG00000004462	protein_coding	Tbccd1	ENSMUST00000232345	nonsense_mediated_decay		16	-1	22857540	2980
ENSMUSG00000031731	protein_coding	Ap1g1	ENSMUST00000173476	retained_intron		8	1	109858448	647
ENSMUSG00000031731	protein_coding	Ap1g1	ENSMUST00000179104	protein_coding		8	1	109863108	1096
ENSMUSG00000115372	lincRNA	1700100I10Rik	ENSMUST00000227763	lincRNA		14	-1	114945931	1053
ENSMUSG00000004462	protein_coding	Tbccd1	ENSMUST00000232555	processed_transcript		16	-1	22825908	208
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000143163	retained_intron		11	-1	76092679	2175
ENSMUSG00000115372	lincRNA	1700100I10Rik	ENSMUST00000226612	lincRNA		14	-1	114945945	713
ENSMUSG00000078143	antisense	Gm17344	ENSMUST00000173980	antisense		8	-1	109868432	621
ENSMUSG00000115372	lincRNA	1700100I10Rik	ENSMUST00000227825	lincRNA		14	-1	114945937	342
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000167114	protein_coding		11	-1	76179499	1259
ENSMUSG00000078143	antisense	Gm17344	ENSMUST00000171173	antisense		8	-1	109868455	1159
ENSMUSG00000037996	protein_coding	Slc24a2	ENSMUST00000107157	protein_coding	principal2	4	-1	87230477	10531
ENSMUSG00000004462	protein_coding	Tbccd1	ENSMUST00000232681	retained_intron		16	-1	22857542	1371
ENSMUSG00000004462	protein_coding	Tbccd1	ENSMUST00000232251	protein_coding		16	-1	22856865	790
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000166752	nonsense_mediated_decay		11	-1	76179499	1888
ENSMUSG00000020790	protein_coding	Ankfy1	ENSMUST00000155998	protein_coding	principal1	11	1	72690006	8030
ENSMUSG00000114979	lincRNA	Gm31072	ENSMUST00000227840	lincRNA		14	1	114945999	314
ENSMUSG00000004462	protein_coding	Tbccd1	ENSMUST00000232009	retained_intron		16	-1	22840199	1868
ENSMUSG00000114979	lincRNA	Gm31072	ENSMUST00000227718	lincRNA		14	1	114946025	280
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000169734	nonsense_mediated_decay		11	-1	76179516	2097
ENSMUSG00000103199	TEC	Gm37648	ENSMUST00000192072	TEC		1	1	156455290	2563
ENSMUSG00000004462	protein_coding	Tbccd1	ENSMUST00000231267	processed_transcript		16	-1	22857544	1951
ENSMUSG00000020790	protein_coding	Ankfy1	ENSMUST00000150172	retained_intron		11	1	72690006	2894
ENSMUSG00000004462	protein_coding	Tbccd1	ENSMUST00000231513	protein_coding		16	-1	22844643	660
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000163878	nonsense_mediated_decay		11	-1	76179532	606
ENSMUSG00000037996	protein_coding	Slc24a2	ENSMUST00000155361	processed_transcript		4	-1	87230467	1796
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000166436	protein_coding		11	-1	76166201	610
ENSMUSG00000106255	lincRNA	Gm36793	ENSMUST00000199211	lincRNA		5	-1	100913707	922
ENSMUSG00000037996	protein_coding	Slc24a2	ENSMUST00000134248	processed_transcript		4	-1	87230423	2230
ENSMUSG00000037996	protein_coding	Slc24a2	ENSMUST00000134643	processed_transcript		4	-1	87230422	1655
ENSMUSG00000085389	lincRNA	1700003M07Rik	ENSMUST00000147634	lincRNA		4	1	129960374	564
ENSMUSG00000105965	processed_pseudogene	Cycs-ps2	ENSMUST00000197114	processed_pseudogene		5	1	101305578	292
ENSMUSG00000085389	lincRNA	1700003M07Rik	ENSMUST00000139884	lincRNA		4	1	129960808	541
ENSMUSG00000037996	protein_coding	Slc24a2	ENSMUST00000044990	protein_coding	alternative1	4	-1	87227873	2218
ENSMUSG00000037996	protein_coding	Slc24a2	ENSMUST00000107155	protein_coding	alternative1	4	-1	87227877	2171
ENSMUSG00000037996	protein_coding	Slc24a2	ENSMUST00000146815	protein_coding		4	-1	87176285	504
ENSMUSG00000107914	processed_pseudogene	Gm44076	ENSMUST00000203072	processed_pseudogene		6	1	116472854	520
ENSMUSG00000025532	protein_coding	Crcp	ENSMUST00000026608	protein_coding	principal1	5	1	130029290	1492
ENSMUSG00000037996	protein_coding	Slc24a2	ENSMUST00000140780	processed_transcript		4	-1	87011673	679
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000170143	retained_intron		11	-1	76179587	846
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000166084	processed_transcript		11	-1	76175792	726
ENSMUSG00000106610	processed_pseudogene	Gm43103	ENSMUST00000199021	processed_pseudogene		5	-1	101506329	802
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000141773	processed_transcript		11	-1	76138748	486
ENSMUSG00000025532	protein_coding	Crcp	ENSMUST00000202163	protein_coding		5	1	130029302	931
ENSMUSG00000037996	protein_coding	Slc24a2	ENSMUST00000107158	protein_coding		4	-1	87227963	10499
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000143459	processed_transcript		11	-1	76154969	361
ENSMUSG00000068083	protein_coding	Cyp2d40	ENSMUST00000055721	protein_coding	principal1	15	-1	82764183	1163
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000170730	protein_coding		11	-1	76179634	506
ENSMUSG00000025532	protein_coding	Crcp	ENSMUST00000202756	protein_coding		5	1	130029311	600
ENSMUSG00000092503	lincRNA	Gm20484	ENSMUST00000173738	lincRNA		5	1	101599314	231
ENSMUSG00000068083	protein_coding	Cyp2d40	ENSMUST00000230433	retained_intron		15	-1	82764183	1803
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000140886	processed_transcript		11	-1	76179612	478
ENSMUSG00000113572	processed_pseudogene	Gm7959	ENSMUST00000221823	processed_pseudogene		12	-1	71270357	1078
ENSMUSG00000017288	protein_coding	Vps53	ENSMUST00000129256	protein_coding		11	-1	76179638	650
ENSMUSG00000086512	lincRNA	Gm12600	ENSMUST00000146704	lincRNA		4	1	87298362	708
ENSMUSG00000049791	protein_coding	Fzd4	ENSMUST00000058755	protein_coding	principal1	7	1	89404355	6720
ENSMUSG00000053391	protein_coding	Olfr211	ENSMUST00000203700	protein_coding	principal1	6	1	116489091	4880
ENSMUSG00000082443	processed_pseudogene	Gm12604	ENSMUST00000118382	processed_pseudogene		4	1	87580789	380
ENSMUSG00000053391	protein_coding	Olfr211	ENSMUST00000065786	protein_coding	principal1	6	1	116493611	930
ENSMUSG00000017999	protein_coding	Ddx27	ENSMUST00000018143	protein_coding	principal1	2	1	167015193	2714
ENSMUSG00000028180	protein_coding	Zranb2	ENSMUST00000106058	protein_coding	principal2	3	1	157534160	2924
ENSMUSG00000025532	protein_coding	Crcp	ENSMUST00000201777	processed_transcript		5	1	130029328	742
ENSMUSG00000089726	lincRNA	Mir17hg	ENSMUST00000134140	lincRNA		14	1	115042879	3536
ENSMUSG00000025532	protein_coding	Crcp	ENSMUST00000156729	processed_transcript		5	1	130029343	669
ENSMUSG00000025592	protein_coding	Dach2	ENSMUST00000113380	protein_coding		X	1	113297510	2894
ENSMUSG00000069808	protein_coding	Fam57a	ENSMUST00000129853	protein_coding		11	1	76179671	962
ENSMUSG00000017999	protein_coding	Ddx27	ENSMUST00000176066	protein_coding		2	1	167015310	955
ENSMUSG00000025532	protein_coding	Crcp	ENSMUST00000202691	processed_transcript		5	1	130042204	453
ENSMUSG00000069808	protein_coding	Fam57a	ENSMUST00000127340	processed_transcript		11	1	76179671	4179
ENSMUSG00000017999	protein_coding	Ddx27	ENSMUST00000150571	protein_coding		2	1	167015310	2151
ENSMUSG00000017999	protein_coding	Ddx27	ENSMUST00000126409	retained_intron		2	1	167026201	264
ENSMUSG00000035187	protein_coding	Nkx6-1	ENSMUST00000044125	protein_coding	principal1	5	-1	101664996	3138
ENSMUSG00000017999	protein_coding	Ddx27	ENSMUST00000138969	retained_intron		2	1	167027542	649
ENSMUSG00000081156	transcribed_processed_pseudogene	Gm14425	ENSMUST00000121240	transcribed_processed_pseudogene		2	1	74855706	606
ENSMUSG00000017999	protein_coding	Ddx27	ENSMUST00000127468	retained_intron		2	1	167033847	708
ENSMUSG00000078513	protein_coding	Gm13088	ENSMUST00000105771	protein_coding	principal1	4	-1	143657246	1819
ENSMUSG00000032350	protein_coding	Gclc	ENSMUST00000034905	protein_coding	principal1	9	1	77754535	3423
ENSMUSG00000106164	lincRNA	9430085M18Rik	ENSMUST00000198824	lincRNA		5	1	101703586	1178
ENSMUSG00000105097	lincRNA	Gm42133	ENSMUST00000196076	lincRNA		5	-1	101704063	637
ENSMUSG00000084351	processed_pseudogene	Gm13085	ENSMUST00000118356	processed_pseudogene		4	-1	143663787	171
ENSMUSG00000081227	processed_pseudogene	Gm13082	ENSMUST00000118877	processed_pseudogene		4	1	143671124	561
ENSMUSG00000032350	protein_coding	Gclc	ENSMUST00000216315	processed_transcript		9	1	77763983	810
ENSMUSG00000032350	protein_coding	Gclc	ENSMUST00000216848	processed_transcript		9	1	77766142	484
ENSMUSG00000069808	protein_coding	Fam57a	ENSMUST00000094014	protein_coding	principal1	11	1	76202015	2130
ENSMUSG00000034329	protein_coding	Brip1	ENSMUST00000044423	protein_coding	principal1	11	-1	86201193	6931
ENSMUSG00000069808	protein_coding	Fam57a	ENSMUST00000130527	retained_intron		11	1	76202064	666
ENSMUSG00000111253	lincRNA	Gm34654	ENSMUST00000217012	lincRNA		9	-1	77809793	535
ENSMUSG00000069808	protein_coding	Fam57a	ENSMUST00000169560	protein_coding		11	1	76202101	1806
ENSMUSG00000111250	lincRNA	Gm47818	ENSMUST00000214737	lincRNA		9	1	77836030	2740
ENSMUSG00000028180	protein_coding	Zranb2	ENSMUST00000184802	nonsense_mediated_decay		3	1	157534359	2542
ENSMUSG00000035268	protein_coding	Pkig	ENSMUST00000147385	retained_intron		2	1	163658386	2808
ENSMUSG00000070617	protein_coding	Gm13089	ENSMUST00000073532	protein_coding	principal1	4	-1	143702711	1807
ENSMUSG00000111580	processed_pseudogene	Gm19572	ENSMUST00000214326	processed_pseudogene		9	1	77851708	338
ENSMUSG00000025592	protein_coding	Dach2	ENSMUST00000113379	protein_coding		X	1	113297522	2512
ENSMUSG00000053251	protein_coding	Olfr212	ENSMUST00000075756	protein_coding	principal1	6	1	116506516	2672
ENSMUSG00000028180	protein_coding	Zranb2	ENSMUST00000198915	nonsense_mediated_decay		3	1	157534376	765
ENSMUSG00000110724	TEC	Gm47824	ENSMUST00000217099	TEC		9	1	77901529	1091
ENSMUSG00000053251	protein_coding	Olfr212	ENSMUST00000218028	protein_coding	principal1	6	1	116513513	2291
ENSMUSG00000034329	protein_coding	Brip1	ENSMUST00000149748	processed_transcript		11	-1	86201164	507
ENSMUSG00000025592	protein_coding	Dach2	ENSMUST00000113378	protein_coding		X	1	113297576	2089
ENSMUSG00000053251	protein_coding	Olfr212	ENSMUST00000220134	protein_coding	principal1	6	1	116513557	2349
ENSMUSG00000028180	protein_coding	Zranb2	ENSMUST00000106057	protein_coding	alternative2	3	1	157534388	2737
ENSMUSG00000034329	protein_coding	Brip1	ENSMUST00000123366	processed_transcript		11	-1	86201166	600
ENSMUSG00000046435	protein_coding	Gm13078	ENSMUST00000078695	protein_coding	principal1	4	1	143719455	2106
ENSMUSG00000080823	processed_pseudogene	Atp5l-ps2	ENSMUST00000121382	processed_pseudogene		11	1	86185329	314
ENSMUSG00000028180	protein_coding	Zranb2	ENSMUST00000152882	retained_intron		3	1	157534425	2490
ENSMUSG00000025592	protein_coding	Dach2	ENSMUST00000146539	retained_intron		X	1	113298252	4451
ENSMUSG00000028180	protein_coding	Zranb2	ENSMUST00000196900	retained_intron		3	1	157539050	2716
ENSMUSG00000028180	protein_coding	Zranb2	ENSMUST00000106063	protein_coding		3	1	157540651	691
ENSMUSG00000027099	protein_coding	Mtx2	ENSMUST00000028511	protein_coding	principal1	2	1	74825803	2950
ENSMUSG00000025592	protein_coding	Dach2	ENSMUST00000113382	protein_coding	alternative2	X	1	113298257	5155
ENSMUSG00000027099	protein_coding	Mtx2	ENSMUST00000155844	retained_intron		2	1	74825830	954
ENSMUSG00000025592	protein_coding	Dach2	ENSMUST00000067219	protein_coding	principal3	X	1	113298257	2520
ENSMUSG00000027099	protein_coding	Mtx2	ENSMUST00000129284	retained_intron		2	1	74868981	728
ENSMUSG00000041372	protein_coding	B4galnt3	ENSMUST00000125341	processed_transcript		6	-1	120242643	3610
ENSMUSG00000109311	lincRNA	AI314278	ENSMUST00000209026	lincRNA		7	1	89426306	2373
ENSMUSG00000025592	protein_coding	Dach2	ENSMUST00000141552	processed_transcript		X	1	113298634	475
ENSMUSG00000109311	lincRNA	AI314278	ENSMUST00000207391	lincRNA		7	1	89426339	532
ENSMUSG00000025592	protein_coding	Dach2	ENSMUST00000123974	processed_transcript		X	1	113724349	3998
ENSMUSG00000083837	processed_pseudogene	Gm14427	ENSMUST00000117183	processed_pseudogene		2	-1	74887006	635
ENSMUSG00000020151	protein_coding	Ptprr	ENSMUST00000063470	protein_coding	principal3	10	1	116018213	3619
ENSMUSG00000082511	processed_pseudogene	Gm4915	ENSMUST00000121909	processed_pseudogene		X	1	114021997	1569
ENSMUSG00000020151	protein_coding	Ptprr	ENSMUST00000142617	processed_transcript		10	1	116018287	2514
ENSMUSG00000020151	protein_coding	Ptprr	ENSMUST00000105271	protein_coding		10	1	116143903	2856
ENSMUSG00000028180	protein_coding	Zranb2	ENSMUST00000029831	protein_coding		3	1	157534359	2540
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000153007	protein_coding		7	1	66689889	453
ENSMUSG00000082567	processed_pseudogene	Gm14896	ENSMUST00000121311	processed_pseudogene		X	1	114036527	1351
ENSMUSG00000084031	processed_pseudogene	Gm7416	ENSMUST00000117448	processed_pseudogene		X	-1	114054304	1487
ENSMUSG00000041372	protein_coding	B4galnt3	ENSMUST00000057283	protein_coding	principal2	6	-1	120294559	3677
ENSMUSG00000041372	protein_coding	B4galnt3	ENSMUST00000212457	protein_coding	alternative2	6	-1	120294559	2958
ENSMUSG00000029090	protein_coding	Adgra3	ENSMUST00000030971	protein_coding	principal1	5	-1	50059006	4480
ENSMUSG00000090589	antisense	Gm17180	ENSMUST00000172211	antisense		2	1	180099913	435
ENSMUSG00000029090	protein_coding	Adgra3	ENSMUST00000196177	processed_transcript		5	-1	49972075	543
ENSMUSG00000029090	protein_coding	Adgra3	ENSMUST00000198818	processed_transcript		5	-1	50001326	797
ENSMUSG00000029090	protein_coding	Adgra3	ENSMUST00000196229	retained_intron		5	-1	50009504	215
ENSMUSG00000029090	protein_coding	Adgra3	ENSMUST00000198868	retained_intron		5	-1	50053379	2991
ENSMUSG00000100603	sense_intronic	1700129L04Rik	ENSMUST00000189291	sense_intronic		15	-1	95162394	1401
ENSMUSG00000029090	protein_coding	Adgra3	ENSMUST00000196915	processed_transcript		5	-1	50058645	396
ENSMUSG00000100603	sense_intronic	1700129L04Rik	ENSMUST00000185302	sense_intronic		15	-1	95149318	1012
ENSMUSG00000029090	protein_coding	Adgra3	ENSMUST00000199132	retained_intron		5	-1	50058645	314
ENSMUSG00000090907	antisense	C030017D09Rik	ENSMUST00000163690	antisense		13	-1	92427224	923
ENSMUSG00000063296	protein_coding	Tmem117	ENSMUST00000229677	retained_intron		15	1	94629232	2662
ENSMUSG00000064294	protein_coding	Aox3	ENSMUST00000161549	retained_intron		1	1	58113130	322
ENSMUSG00000045034	protein_coding	Ankrd34b	ENSMUST00000061594	protein_coding	principal1	13	1	92425896	4013
ENSMUSG00000045034	protein_coding	Ankrd34b	ENSMUST00000165225	protein_coding		13	1	92426341	747
ENSMUSG00000045034	protein_coding	Ankrd34b	ENSMUST00000168871	protein_coding	principal1	13	1	92426658	3397
ENSMUSG00000084099	processed_pseudogene	Gm12929	ENSMUST00000122406	processed_pseudogene		4	-1	126476671	370
ENSMUSG00000053436	protein_coding	Mapk14	ENSMUST00000004990	protein_coding	alternative1	17	1	28691329	3562
ENSMUSG00000020151	protein_coding	Ptprr	ENSMUST00000148731	protein_coding	alternative2	10	1	116177258	2511
ENSMUSG00000063296	protein_coding	Tmem117	ENSMUST00000080141	protein_coding	principal1	15	1	94629250	2717
ENSMUSG00000034118	protein_coding	Tpst1	ENSMUST00000118993	protein_coding	principal1	5	1	130073326	1867
ENSMUSG00000020151	protein_coding	Ptprr	ENSMUST00000155606	protein_coding	alternative2	10	1	116177351	2703
ENSMUSG00000034118	protein_coding	Tpst1	ENSMUST00000040721	protein_coding	principal1	5	1	130079370	2050
ENSMUSG00000035268	protein_coding	Pkig	ENSMUST00000064703	protein_coding	principal1	2	1	163658399	1036
ENSMUSG00000034118	protein_coding	Tpst1	ENSMUST00000142838	protein_coding		5	1	130093589	589
ENSMUSG00000034118	protein_coding	Tpst1	ENSMUST00000128335	retained_intron		5	1	130133957	1047
ENSMUSG00000107216	TEC	2210412B16Rik	ENSMUST00000201281	TEC		5	1	130131327	498
ENSMUSG00000082717	processed_pseudogene	Gm13087	ENSMUST00000118298	processed_pseudogene		4	-1	143735553	256
ENSMUSG00000035268	protein_coding	Pkig	ENSMUST00000099105	protein_coding	principal1	2	1	163658415	640
ENSMUSG00000082030	processed_pseudogene	Gm13081	ENSMUST00000121527	processed_pseudogene		4	1	143745787	5599
ENSMUSG00000035268	protein_coding	Pkig	ENSMUST00000152418	protein_coding		2	1	163658458	429
ENSMUSG00000037754	protein_coding	Ppp1r16b	ENSMUST00000052927	protein_coding	principal1	2	1	158665398	6685
ENSMUSG00000039059	protein_coding	Hrh3	ENSMUST00000056480	protein_coding	principal2	2	-1	180104488	2706
ENSMUSG00000032399	protein_coding	Rpl4	ENSMUST00000034966	protein_coding	principal1	9	1	64173375	1538
ENSMUSG00000037754	protein_coding	Ppp1r16b	ENSMUST00000045503	protein_coding	principal1	2	1	158667119	6408
ENSMUSG00000037754	protein_coding	Ppp1r16b	ENSMUST00000129902	retained_intron		2	1	158665398	3732
ENSMUSG00000037754	protein_coding	Ppp1r16b	ENSMUST00000145073	protein_coding		2	1	158696135	5878
ENSMUSG00000035268	protein_coding	Pkig	ENSMUST00000126182	protein_coding	principal1	2	1	163658477	762
ENSMUSG00000032399	protein_coding	Rpl4	ENSMUST00000217055	retained_intron		9	1	64173393	856
ENSMUSG00000037754	protein_coding	Ppp1r16b	ENSMUST00000103116	protein_coding	principal1	2	1	158666733	6370
ENSMUSG00000035268	protein_coding	Pkig	ENSMUST00000131228	protein_coding		2	1	163658480	416
ENSMUSG00000032399	protein_coding	Rpl4	ENSMUST00000213760	retained_intron		9	1	64177135	596
ENSMUSG00000020151	protein_coding	Ptprr	ENSMUST00000128399	protein_coding	alternative2	10	1	116177411	2173
ENSMUSG00000035268	protein_coding	Pkig	ENSMUST00000135537	protein_coding		2	1	163661499	369
ENSMUSG00000117253	processed_pseudogene	Gm49930	ENSMUST00000233943	processed_pseudogene		17	-1	66187991	334
ENSMUSG00000020151	protein_coding	Ptprr	ENSMUST00000124369	processed_transcript		10	1	116196396	441
ENSMUSG00000117312	processed_pseudogene	Gm49931	ENSMUST00000233423	processed_pseudogene		17	1	66188258	947
ENSMUSG00000035268	protein_coding	Pkig	ENSMUST00000109400	protein_coding	principal1	2	1	163694038	1059
ENSMUSG00000117296	lincRNA	Gm20742	ENSMUST00000233041	lincRNA		17	1	66193352	3450
ENSMUSG00000032398	protein_coding	Snapc5	ENSMUST00000034965	protein_coding	principal1	9	1	64179274	1228
ENSMUSG00000034110	protein_coding	Kctd7	ENSMUST00000040616	protein_coding	principal1	5	1	130144861	4291
ENSMUSG00000117246	processed_pseudogene	Gm17891	ENSMUST00000232894	processed_pseudogene		17	-1	66228027	779
ENSMUSG00000035268	protein_coding	Pkig	ENSMUST00000164399	protein_coding	principal1	2	1	163658386	983
ENSMUSG00000034110	protein_coding	Kctd7	ENSMUST00000144878	nonsense_mediated_decay		5	1	130144924	612
ENSMUSG00000117220	lincRNA	Gm49932	ENSMUST00000233985	lincRNA		17	-1	66236369	1152
ENSMUSG00000117220	lincRNA	Gm49932	ENSMUST00000233452	lincRNA		17	-1	66234945	512
ENSMUSG00000034110	protein_coding	Kctd7	ENSMUST00000144467	protein_coding		5	1	130145104	696
ENSMUSG00000117010	processed_pseudogene	Gm49933	ENSMUST00000233050	processed_pseudogene		17	-1	66319512	228
ENSMUSG00000026600	protein_coding	Soat1	ENSMUST00000189661	protein_coding	principal1	1	-1	156474331	8371
ENSMUSG00000104822	TEC	Gm42967	ENSMUST00000198647	TEC		3	-1	152383168	2312
ENSMUSG00000030745	protein_coding	Il21r	ENSMUST00000206234	nonsense_mediated_decay		7	1	125603429	1822
ENSMUSG00000104546	TEC	Gm43858	ENSMUST00000199418	TEC		3	1	152386260	1778
ENSMUSG00000026600	protein_coding	Soat1	ENSMUST00000051396	protein_coding	principal1	1	-1	156466804	2925
ENSMUSG00000026600	protein_coding	Soat1	ENSMUST00000186420	retained_intron		1	-1	156432573	761
ENSMUSG00000026600	protein_coding	Soat1	ENSMUST00000187987	retained_intron		1	-1	156433019	452
ENSMUSG00000093551	processed_transcript	4930505G20Rik	ENSMUST00000176582	processed_transcript		14	-1	115409552	561
ENSMUSG00000022112	protein_coding	Gpc5	ENSMUST00000176993	retained_intron		14	1	115092215	1638
ENSMUSG00000105769	lincRNA	Gm43351	ENSMUST00000198737	lincRNA		3	1	130874073	326
ENSMUSG00000030745	protein_coding	Il21r	ENSMUST00000206103	protein_coding	alternative2	7	1	125603494	2147
ENSMUSG00000104984	processed_pseudogene	Gm5982	ENSMUST00000196234	processed_pseudogene		3	-1	130846973	512
ENSMUSG00000026600	protein_coding	Soat1	ENSMUST00000191379	retained_intron		1	-1	156474240	1952
ENSMUSG00000039059	protein_coding	Hrh3	ENSMUST00000163215	protein_coding		2	-1	180104151	1401
ENSMUSG00000104579	TEC	5830437K03Rik	ENSMUST00000199219	TEC		3	1	130901665	1379
ENSMUSG00000039059	protein_coding	Hrh3	ENSMUST00000165762	protein_coding	alternative2	2	-1	180104151	1368
ENSMUSG00000039059	protein_coding	Hrh3	ENSMUST00000165248	protein_coding	alternative2	2	-1	180104151	1224
ENSMUSG00000105558	processed_pseudogene	Gm5855	ENSMUST00000200240	processed_pseudogene		3	-1	130930670	1305
ENSMUSG00000026600	protein_coding	Soat1	ENSMUST00000187507	protein_coding		1	-1	156474296	821
ENSMUSG00000039059	protein_coding	Hrh3	ENSMUST00000166724	nonsense_mediated_decay		2	-1	180104174	1574
ENSMUSG00000030745	protein_coding	Il21r	ENSMUST00000033000	protein_coding	principal2	7	1	125603537	2499
ENSMUSG00000026600	protein_coding	Soat1	ENSMUST00000187073	retained_intron		1	-1	156474197	509
ENSMUSG00000106249	lincRNA	Gm43349	ENSMUST00000200047	lincRNA		3	-1	130924837	503
ENSMUSG00000039059	protein_coding	Hrh3	ENSMUST00000171736	protein_coding		2	-1	180104151	906
ENSMUSG00000026600	protein_coding	Soat1	ENSMUST00000188027	protein_coding		1	-1	156474264	366
ENSMUSG00000039059	protein_coding	Hrh3	ENSMUST00000164442	protein_coding	alternative2	2	-1	180104151	1242
ENSMUSG00000106095	lincRNA	2010110G14Rik	ENSMUST00000196438	lincRNA		3	-1	130937337	527
ENSMUSG00000039059	protein_coding	Hrh3	ENSMUST00000166392	retained_intron		2	-1	180103335	1040
ENSMUSG00000022112	protein_coding	Gpc5	ENSMUST00000176912	protein_coding		14	1	115092250	2837
ENSMUSG00000105628	TEC	Gm43350	ENSMUST00000196382	TEC		3	1	130884851	711
ENSMUSG00000022112	protein_coding	Gpc5	ENSMUST00000175665	protein_coding		14	1	115092272	2187
ENSMUSG00000104557	lincRNA	Gm36520	ENSMUST00000200449	lincRNA		3	1	130867279	400
ENSMUSG00000022112	protein_coding	Gpc5	ENSMUST00000022707	protein_coding	principal1	14	1	115092626	1719
ENSMUSG00000093497	processed_transcript	Gm20713	ENSMUST00000176344	processed_transcript		14	-1	115871278	435
ENSMUSG00000084057	processed_pseudogene	Gm8916	ENSMUST00000119732	processed_pseudogene		X	-1	91547541	949
ENSMUSG00000093589	processed_pseudogene	Gm18367	ENSMUST00000176139	processed_pseudogene		14	-1	115556522	600
ENSMUSG00000022454	protein_coding	Nell2	ENSMUST00000229933	protein_coding		15	-1	95528559	3152
ENSMUSG00000117276	processed_pseudogene	Gm49910	ENSMUST00000233369	processed_pseudogene		17	-1	71154020	186
ENSMUSG00000117315	lincRNA	1600022D10Rik	ENSMUST00000233463	lincRNA		17	1	71144538	1562
ENSMUSG00000022454	protein_coding	Nell2	ENSMUST00000229981	nonsense_mediated_decay		15	-1	95528178	3222
ENSMUSG00000022454	protein_coding	Nell2	ENSMUST00000166170	protein_coding	principal1	15	-1	95528559	3220
ENSMUSG00000022454	protein_coding	Nell2	ENSMUST00000075275	protein_coding	principal1	15	-1	95528252	2675
ENSMUSG00000108650	sense_intronic	Gm44867	ENSMUST00000206322	sense_intronic		7	-1	116282743	228
ENSMUSG00000108650	sense_intronic	Gm44867	ENSMUST00000205675	sense_intronic		7	-1	116282885	530
ENSMUSG00000072934	protein_coding	Trpc5os	ENSMUST00000155206	protein_coding	principal1	X	1	144456581	3585
ENSMUSG00000072934	protein_coding	Trpc5os	ENSMUST00000178233	protein_coding	principal1	X	1	144470681	3515
ENSMUSG00000082106	processed_pseudogene	Mageb16-ps1	ENSMUST00000117991	processed_pseudogene		X	-1	144556337	1127
ENSMUSG00000032271	protein_coding	Nnmt	ENSMUST00000034808	protein_coding	principal1	9	-1	48605153	1043
ENSMUSG00000032271	protein_coding	Nnmt	ENSMUST00000119426	protein_coding		9	-1	48605153	912
ENSMUSG00000053436	protein_coding	Mapk14	ENSMUST00000062694	protein_coding	principal3	17	1	28691342	3548
ENSMUSG00000032271	protein_coding	Nnmt	ENSMUST00000128076	retained_intron		9	-1	48605077	558
ENSMUSG00000053436	protein_coding	Mapk14	ENSMUST00000124886	protein_coding		17	1	28691440	866
ENSMUSG00000032271	protein_coding	Nnmt	ENSMUST00000126109	processed_transcript		9	-1	48597449	699
ENSMUSG00000032271	protein_coding	Nnmt	ENSMUST00000136813	processed_transcript		9	-1	48597375	737
ENSMUSG00000053436	protein_coding	Mapk14	ENSMUST00000114758	protein_coding		17	1	28691445	1478
ENSMUSG00000083955	processed_pseudogene	Gm14785	ENSMUST00000120185	processed_pseudogene		X	1	91550084	539
ENSMUSG00000064294	protein_coding	Aox3	ENSMUST00000040999	protein_coding	principal1	1	1	58113136	4606
ENSMUSG00000053436	protein_coding	Mapk14	ENSMUST00000233811	nonsense_mediated_decay		17	1	28691445	3490
ENSMUSG00000057805	protein_coding	1700084M14Rik	ENSMUST00000078832	protein_coding	principal1	X	-1	91575911	559
ENSMUSG00000053436	protein_coding	Mapk14	ENSMUST00000233250	protein_coding		17	1	28691740	1066
ENSMUSG00000064294	protein_coding	Aox3	ENSMUST00000159014	retained_intron		1	1	58113138	1926
ENSMUSG00000064294	protein_coding	Aox3	ENSMUST00000162011	protein_coding		1	1	58113186	1568
ENSMUSG00000041710	protein_coding	Trpc5	ENSMUST00000040184	protein_coding	principal1	X	-1	144688180	4158
ENSMUSG00000064294	protein_coding	Aox3	ENSMUST00000160815	retained_intron		1	1	58169624	648
ENSMUSG00000081960	unprocessed_pseudogene	Mageb17-ps	ENSMUST00000117902	unprocessed_pseudogene		X	1	91625395	919
ENSMUSG00000087333	lincRNA	Gm13652	ENSMUST00000143898	lincRNA		2	-1	75137798	3412
ENSMUSG00000041710	protein_coding	Trpc5	ENSMUST00000148240	retained_intron		X	-1	144688003	2782
ENSMUSG00000064129	protein_coding	Gm14781	ENSMUST00000078469	protein_coding	principal1	X	1	91632194	1360
ENSMUSG00000081635	processed_pseudogene	Gm15071	ENSMUST00000118189	processed_pseudogene		X	1	144499327	1366
ENSMUSG00000032349	protein_coding	Elovl5	ENSMUST00000034904	protein_coding	principal1	9	1	77917364	2782
ENSMUSG00000006411	protein_coding	Nectin4	ENSMUST00000111286	protein_coding	principal3	1	1	171370099	3201
ENSMUSG00000032349	protein_coding	Elovl5	ENSMUST00000148398	retained_intron		9	1	77917434	685
ENSMUSG00000032349	protein_coding	Elovl5	ENSMUST00000133757	protein_coding		9	1	77921932	638
ENSMUSG00000032349	protein_coding	Elovl5	ENSMUST00000134072	protein_coding		9	1	77941291	346
ENSMUSG00000006411	protein_coding	Nectin4	ENSMUST00000006578	protein_coding	principal3	1	1	171370352	3636
ENSMUSG00000111610	lincRNA	Gm34829	ENSMUST00000213816	lincRNA		9	1	77992599	1067
ENSMUSG00000111610	lincRNA	Gm34829	ENSMUST00000216017	lincRNA		9	1	77992599	1131
ENSMUSG00000111335	lincRNA	Gm39375	ENSMUST00000217068	lincRNA		9	1	78015018	1039
ENSMUSG00000005374	protein_coding	Tbl2	ENSMUST00000153183	protein_coding	principal1	5	1	135149657	7488
ENSMUSG00000039405	protein_coding	Prss23	ENSMUST00000041761	protein_coding	principal1	7	-1	89517586	3228
ENSMUSG00000058613	unprocessed_pseudogene	Cyp2d41-ps	ENSMUST00000180453	unprocessed_pseudogene		15	-1	82782110	1503
ENSMUSG00000111850	processed_pseudogene	Gm47829	ENSMUST00000216404	processed_pseudogene		9	1	78027945	145
ENSMUSG00000039405	protein_coding	Prss23	ENSMUST00000207932	protein_coding	principal1	7	-1	89527187	1937
ENSMUSG00000104296	TEC	Gm38045	ENSMUST00000193536	TEC		14	1	116750215	199
ENSMUSG00000006411	protein_coding	Nectin4	ENSMUST00000094325	protein_coding	alternative1	1	1	171370355	3245
ENSMUSG00000039405	protein_coding	Prss23	ENSMUST00000209118	processed_transcript		7	-1	89517870	633
ENSMUSG00000039405	protein_coding	Prss23	ENSMUST00000208402	protein_coding		7	-1	89518193	682
ENSMUSG00000005374	protein_coding	Tbl2	ENSMUST00000139565	nonsense_mediated_decay		5	1	135149686	840
ENSMUSG00000083462	processed_pseudogene	Gm12501	ENSMUST00000119163	processed_pseudogene		3	-1	108239911	529
ENSMUSG00000053436	protein_coding	Mapk14	ENSMUST00000114752	protein_coding		17	1	28692568	3148
ENSMUSG00000005374	protein_coding	Tbl2	ENSMUST00000005508	nonsense_mediated_decay		5	1	135149686	1368
ENSMUSG00000031323	protein_coding	Dmrtc1a	ENSMUST00000119624	protein_coding	alternative2	X	-1	102908672	1149
ENSMUSG00000053436	protein_coding	Mapk14	ENSMUST00000233095	processed_transcript		17	1	28728407	223
ENSMUSG00000005374	protein_coding	Tbl2	ENSMUST00000201780	nonsense_mediated_decay		5	1	135149691	380
ENSMUSG00000105961	lincRNA	Gm40123	ENSMUST00000198175	lincRNA		3	1	108226787	1027
ENSMUSG00000021938	protein_coding	Pspc1	ENSMUST00000022507	protein_coding	principal2	14	-1	56778316	4114
ENSMUSG00000053436	protein_coding	Mapk14	ENSMUST00000151613	retained_intron		17	1	28741619	509
ENSMUSG00000039405	protein_coding	Prss23	ENSMUST00000207636	protein_coding		7	-1	89518181	507
ENSMUSG00000005374	protein_coding	Tbl2	ENSMUST00000152013	protein_coding		5	1	135152718	766
ENSMUSG00000053436	protein_coding	Mapk14	ENSMUST00000114754	protein_coding		17	1	28691342	3592
ENSMUSG00000066687	protein_coding	Zbtb16	ENSMUST00000093852	protein_coding	principal1	9	-1	48835945	5114
ENSMUSG00000039405	protein_coding	Prss23	ENSMUST00000208888	protein_coding		7	-1	89517516	494
ENSMUSG00000021938	protein_coding	Pspc1	ENSMUST00000163924	protein_coding	alternative2	14	-1	56778316	2863
ENSMUSG00000066687	protein_coding	Zbtb16	ENSMUST00000216150	protein_coding	principal1	9	-1	48836222	2505
ENSMUSG00000023333	protein_coding	Gcm1	ENSMUST00000024104	protein_coding	principal1	9	1	78051924	2068
ENSMUSG00000102710	processed_pseudogene	Gm4857	ENSMUST00000192718	processed_pseudogene		3	-1	81556825	785
ENSMUSG00000039405	protein_coding	Prss23	ENSMUST00000207538	protein_coding		7	-1	89517921	361
ENSMUSG00000021938	protein_coding	Pspc1	ENSMUST00000168524	retained_intron		14	-1	56761867	528
ENSMUSG00000039405	protein_coding	Prss23	ENSMUST00000208903	protein_coding		7	-1	89518548	355
ENSMUSG00000021938	protein_coding	Pspc1	ENSMUST00000168575	nonsense_mediated_decay		14	-1	56777927	601
ENSMUSG00000104732	lincRNA	Gm43346	ENSMUST00000198290	lincRNA		3	1	81721676	685
ENSMUSG00000111596	processed_pseudogene	Gm8058	ENSMUST00000217247	processed_pseudogene		9	1	78068851	587
ENSMUSG00000030623	antisense	Prss23os	ENSMUST00000179361	antisense		7	1	89510007	1362
ENSMUSG00000030623	antisense	Prss23os	ENSMUST00000209064	antisense		7	1	89510007	972
ENSMUSG00000058571	protein_coding	Gpc6	ENSMUST00000123239	retained_intron		14	1	116925315	4146
ENSMUSG00000030623	antisense	Prss23os	ENSMUST00000032858	antisense		7	1	89510023	334
ENSMUSG00000061392	protein_coding	Mageb5	ENSMUST00000082048	protein_coding	principal1	X	-1	91783018	1357
ENSMUSG00000030623	antisense	Prss23os	ENSMUST00000208814	antisense		7	1	89510028	975
ENSMUSG00000085102	antisense	1700010K24Rik	ENSMUST00000125852	antisense		3	-1	108256985	226
ENSMUSG00000027654	protein_coding	Fam83d	ENSMUST00000029183	protein_coding	principal1	2	1	158768093	2266
ENSMUSG00000022365	protein_coding	Derl1	ENSMUST00000022993	protein_coding	principal1	15	-1	57892448	3175
ENSMUSG00000027654	protein_coding	Fam83d	ENSMUST00000151801	retained_intron		2	1	158781408	3328
ENSMUSG00000022365	protein_coding	Derl1	ENSMUST00000226911	processed_transcript		15	-1	57890394	861
ENSMUSG00000103695	lincRNA	A830029E22Rik	ENSMUST00000193672	lincRNA		3	1	81802025	1194
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000230629	lincRNA		2	1	75138843	1167
ENSMUSG00000058571	protein_coding	Gpc6	ENSMUST00000088483	protein_coding	principal3	14	1	116925430	3488
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000229776	lincRNA		2	1	75138852	906
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000229092	lincRNA		2	1	75138853	1596
ENSMUSG00000111570	antisense	Gm32335	ENSMUST00000216896	antisense		9	1	48896451	2948
ENSMUSG00000058571	protein_coding	Gpc6	ENSMUST00000125435	protein_coding	alternative2	14	1	116925531	2423
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000186411	lincRNA		2	1	75138855	4805
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000230065	lincRNA		2	1	75138874	1071
ENSMUSG00000058571	protein_coding	Gpc6	ENSMUST00000078849	protein_coding	principal3	14	1	116925936	1668
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000230865	lincRNA		2	1	75138874	1072
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000230800	lincRNA		2	1	75138876	1638
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000230991	lincRNA		2	1	75138880	1157
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000230510	lincRNA		2	1	75248400	1974
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000230015	lincRNA		2	1	75248446	531
ENSMUSG00000026301	protein_coding	Iqca	ENSMUST00000113094	protein_coding	principal2	1	-1	90153401	3210
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000230987	lincRNA		2	1	75248473	409
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000229528	lincRNA		2	1	75297487	666
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000230745	lincRNA		2	1	75301740	863
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000229621	lincRNA		2	1	75302595	1248
ENSMUSG00000100303	lincRNA	2600014E21Rik	ENSMUST00000229575	lincRNA		2	1	75304574	1471
ENSMUSG00000026301	protein_coding	Iqca	ENSMUST00000189690	processed_transcript		1	-1	90090144	2060
ENSMUSG00000026301	protein_coding	Iqca	ENSMUST00000212859	processed_transcript		1	-1	90054960	1206
ENSMUSG00000086044	lincRNA	A330043C09Rik	ENSMUST00000139823	lincRNA		2	-1	75177658	1009
ENSMUSG00000026301	protein_coding	Iqca	ENSMUST00000212394	protein_coding	alternative2	1	-1	90153175	2574
ENSMUSG00000115959	processed_pseudogene	Gm18494	ENSMUST00000229971	processed_pseudogene		2	-1	75303225	1154
ENSMUSG00000026301	protein_coding	Iqca	ENSMUST00000189011	protein_coding		1	-1	90066924	374
ENSMUSG00000081406	processed_pseudogene	Rps6-ps4	ENSMUST00000118499	processed_pseudogene		2	-1	75191822	750
ENSMUSG00000022445	protein_coding	Cyp2d26	ENSMUST00000006094	protein_coding	principal1	15	-1	82794294	1700
ENSMUSG00000026301	protein_coding	Iqca	ENSMUST00000186403	processed_transcript		1	-1	90090143	386
ENSMUSG00000075276	processed_pseudogene	Gm13653	ENSMUST00000122260	processed_pseudogene		2	1	75192277	483
ENSMUSG00000022445	protein_coding	Cyp2d26	ENSMUST00000229387	nonsense_mediated_decay		15	-1	82794294	1671
ENSMUSG00000068749	protein_coding	Psma5	ENSMUST00000090569	protein_coding	principal1	3	1	108256926	1239
ENSMUSG00000022445	protein_coding	Cyp2d26	ENSMUST00000229512	nonsense_mediated_decay		15	-1	82794222	821
ENSMUSG00000026301	protein_coding	Iqca	ENSMUST00000211999	processed_transcript		1	-1	90144978	749
ENSMUSG00000068749	protein_coding	Psma5	ENSMUST00000129708	nonsense_mediated_decay		3	1	108268875	387
ENSMUSG00000022445	protein_coding	Cyp2d26	ENSMUST00000230125	retained_intron		15	-1	82794245	525
ENSMUSG00000026301	protein_coding	Iqca	ENSMUST00000186522	processed_transcript		1	-1	90153401	1481
ENSMUSG00000071552	protein_coding	Tigit	ENSMUST00000096065	protein_coding	principal1	16	-1	43664146	919
ENSMUSG00000115689	antisense	4930435M08Rik	ENSMUST00000228171	antisense		14	1	118044974	1567
ENSMUSG00000085678	processed_transcript	Gm16349	ENSMUST00000149990	processed_transcript		8	1	109925388	394
ENSMUSG00000045237	protein_coding	1110012L19Rik	ENSMUST00000053981	protein_coding	principal1	X	1	70385877	1094
ENSMUSG00000116565	processed_pseudogene	Gm49734	ENSMUST00000231991	processed_pseudogene		16	-1	43689396	146
ENSMUSG00000031732	protein_coding	Phlpp2	ENSMUST00000154262	retained_intron		8	1	109868542	1323
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000121777	protein_coding	principal3	7	1	66689894	2729
ENSMUSG00000116684	lincRNA	Gm49735	ENSMUST00000232267	lincRNA		16	-1	43710832	560
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000150071	protein_coding		7	1	66689900	537
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000128486	retained_intron		7	1	66689949	1419
ENSMUSG00000036430	protein_coding	Tbcc	ENSMUST00000040434	protein_coding	principal1	17	1	46890684	1164
ENSMUSG00000022129	protein_coding	Dct	ENSMUST00000022725	protein_coding	principal1	14	-1	118052185	2202
ENSMUSG00000050538	protein_coding	B230217C12Rik	ENSMUST00000155954	protein_coding		11	1	97841300	2181
ENSMUSG00000031323	protein_coding	Dmrtc1a	ENSMUST00000120808	protein_coding		X	-1	102906469	1061
ENSMUSG00000050538	protein_coding	B230217C12Rik	ENSMUST00000164364	protein_coding		11	1	97841315	1859
ENSMUSG00000022129	protein_coding	Dct	ENSMUST00000228925	retained_intron		14	-1	118027535	3459
ENSMUSG00000031732	protein_coding	Phlpp2	ENSMUST00000034175	protein_coding	alternative2	8	1	109868611	7839
ENSMUSG00000050538	protein_coding	B230217C12Rik	ENSMUST00000170806	protein_coding		11	1	97841319	1118
ENSMUSG00000022129	protein_coding	Dct	ENSMUST00000228548	processed_transcript		14	-1	118052244	1868
ENSMUSG00000022129	protein_coding	Dct	ENSMUST00000227850	retained_intron		14	-1	118043129	565
ENSMUSG00000031732	protein_coding	Phlpp2	ENSMUST00000179721	protein_coding	principal2	8	1	109868603	7846
ENSMUSG00000032269	protein_coding	Htr3a	ENSMUST00000217289	protein_coding	alternative2	9	-1	48911021	1987
ENSMUSG00000050538	protein_coding	B230217C12Rik	ENSMUST00000054783	protein_coding	principal1	11	1	97840780	1189
ENSMUSG00000023978	protein_coding	Prph2	ENSMUST00000024773	protein_coding	principal1	17	1	46910459	2665
ENSMUSG00000023978	protein_coding	Prph2	ENSMUST00000162469	retained_intron		17	1	46910478	1384
ENSMUSG00000108875	lincRNA	Gm45064	ENSMUST00000208619	lincRNA		7	1	89552366	443
ENSMUSG00000100850	lincRNA	4930434B07Rik	ENSMUST00000190254	lincRNA		1	1	90153628	1020
ENSMUSG00000098019	processed_pseudogene	Gm2546	ENSMUST00000182630	processed_pseudogene		7	1	89607706	991
ENSMUSG00000031323	protein_coding	Dmrtc1a	ENSMUST00000121197	protein_coding	principal2	X	-1	102906558	1067
ENSMUSG00000032269	protein_coding	Htr3a	ENSMUST00000003826	protein_coding	principal2	9	-1	48911099	2082
ENSMUSG00000031323	protein_coding	Dmrtc1a	ENSMUST00000033686	protein_coding		X	-1	102908687	1247
ENSMUSG00000084303	processed_pseudogene	Gm8216	ENSMUST00000117232	processed_pseudogene		X	1	144847683	601
ENSMUSG00000073141	lincRNA	4930567H17Rik	ENSMUST00000193512	lincRNA		X	-1	70394740	840
ENSMUSG00000104859	TEC	A430072C10Rik	ENSMUST00000197848	TEC		3	-1	131026370	2532
ENSMUSG00000071679	protein_coding	Rtl4	ENSMUST00000112843	protein_coding	principal1	X	1	144688907	3635
ENSMUSG00000071679	protein_coding	Rtl4	ENSMUST00000096301	protein_coding	principal1	X	1	145119501	1758
ENSMUSG00000082807	processed_pseudogene	Gm14782	ENSMUST00000120151	processed_pseudogene		X	-1	91859692	195
ENSMUSG00000116280	unprocessed_pseudogene	Gm49435	ENSMUST00000229945	unprocessed_pseudogene		15	-1	82803964	996
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000077967	protein_coding	alternative2	7	1	66689958	2647
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000117492	protein_coding	alternative2	3	1	152346478	3886
ENSMUSG00000092071	antisense	A230065N10Rik	ENSMUST00000172178	antisense		7	-1	89633124	1028
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000026507	protein_coding		3	1	152346478	4153
ENSMUSG00000089938	unprocessed_pseudogene	Gm15744	ENSMUST00000161734	unprocessed_pseudogene		7	-1	89761675	213
ENSMUSG00000109150	TEC	Gm45793	ENSMUST00000207900	TEC		7	1	89827218	1342
ENSMUSG00000035337	protein_coding	Uchl4	ENSMUST00000039011	protein_coding	principal1	9	1	64235201	1162
ENSMUSG00000032314	protein_coding	Etfa	ENSMUST00000034866	protein_coding	principal1	9	-1	55512243	1392
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000130161	nonsense_mediated_decay		7	1	66689958	5088
ENSMUSG00000032314	protein_coding	Etfa	ENSMUST00000139342	processed_transcript		9	-1	55487513	487
ENSMUSG00000028149	protein_coding	Rap1gds1	ENSMUST00000098574	protein_coding	principal4	3	-1	139075201	3669
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000133771	nonsense_mediated_decay		7	1	66689971	2719
ENSMUSG00000026356	protein_coding	Dars	ENSMUST00000027602	protein_coding	principal1	1	-1	128417359	2175
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000197748	protein_coding	principal3	3	1	152346489	4183
ENSMUSG00000032314	protein_coding	Etfa	ENSMUST00000153186	processed_transcript		9	-1	55512120	828
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000065323	nonsense_mediated_decay		7	1	66708030	2332
ENSMUSG00000028149	protein_coding	Rap1gds1	ENSMUST00000196280	protein_coding	alternative1	3	-1	139075137	3598
ENSMUSG00000032314	protein_coding	Etfa	ENSMUST00000142587	processed_transcript		9	-1	55511808	578
ENSMUSG00000026356	protein_coding	Dars	ENSMUST00000186398	retained_intron		1	-1	128379487	2144
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000132351	protein_coding		7	1	66708178	732
ENSMUSG00000030621	protein_coding	Me3	ENSMUST00000159504	retained_intron		7	1	89632392	4449
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000153773	protein_coding		7	1	66708323	686
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000123237	nonsense_mediated_decay		3	1	152346512	2935
ENSMUSG00000030621	protein_coding	Me3	ENSMUST00000162145	processed_transcript		7	1	89632534	3036
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000133199	nonsense_mediated_decay		7	1	66709409	781
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000142969	retained_intron		3	1	152346515	460
ENSMUSG00000079476	protein_coding	1700011M02Rik	ENSMUST00000113602	protein_coding	principal1	X	1	102908905	420
ENSMUSG00000053091	protein_coding	Lins1	ENSMUST00000132181	retained_intron		7	1	66710146	4227
ENSMUSG00000020777	protein_coding	Acox1	ENSMUST00000066587	protein_coding	principal3	11	-1	116199045	3987
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000138575	processed_transcript		3	1	152361898	746
ENSMUSG00000026356	protein_coding	Dars	ENSMUST00000064309	protein_coding		1	-1	128417368	645
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000196811	retained_intron		3	1	152363901	3256
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000198950	retained_intron		3	1	152366276	923
ENSMUSG00000028149	protein_coding	Rap1gds1	ENSMUST00000029796	protein_coding	alternative1	3	-1	139075070	3383
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000197600	nonsense_mediated_decay		3	1	152368430	821
ENSMUSG00000020777	protein_coding	Acox1	ENSMUST00000072948	protein_coding	alternative1	11	-1	116198801	3743
ENSMUSG00000081649	protein_coding	Olfr213	ENSMUST00000220008	protein_coding	principal1	6	1	116538456	4020
ENSMUSG00000056023	processed_transcript	Gm9989	ENSMUST00000193125	lincRNA		3	-1	81924398	258
ENSMUSG00000056023	processed_transcript	Gm9989	ENSMUST00000069880	retained_intron		3	-1	81924463	3196
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000197325	processed_transcript		3	1	152382048	780
ENSMUSG00000081649	protein_coding	Olfr213	ENSMUST00000121958	protein_coding	principal1	6	1	116540455	984
ENSMUSG00000020777	protein_coding	Acox1	ENSMUST00000148601	protein_coding		11	-1	116189575	3538
ENSMUSG00000025437	protein_coding	Usp33	ENSMUST00000198596	retained_intron		3	1	152382536	596
ENSMUSG00000038733	protein_coding	Wdr26	ENSMUST00000237749	protein_coding		1	-1	181212001	7068
ENSMUSG00000104548	TEC	Gm43857	ENSMUST00000200343	TEC		3	-1	152394240	3079
ENSMUSG00000104612	TEC	Gm42449	ENSMUST00000200349	TEC		3	1	131136785	2258
ENSMUSG00000097287	lincRNA	D130017N08Rik	ENSMUST00000180951	lincRNA		5	1	143758354	2573
ENSMUSG00000105710	TEC	Gm43859	ENSMUST00000200075	TEC		3	-1	152385217	1412
ENSMUSG00000097287	lincRNA	D130017N08Rik	ENSMUST00000180460	lincRNA		5	1	143759862	510
ENSMUSG00000097287	lincRNA	D130017N08Rik	ENSMUST00000199836	lincRNA		5	1	143764104	506
ENSMUSG00000020777	protein_coding	Acox1	ENSMUST00000130229	processed_transcript		11	-1	116182266	3292
ENSMUSG00000097287	lincRNA	D130017N08Rik	ENSMUST00000196629	lincRNA		5	1	143766311	2265
ENSMUSG00000020777	protein_coding	Acox1	ENSMUST00000124684	processed_transcript		11	-1	116198729	841
ENSMUSG00000079963	processed_pseudogene	Gm7146	ENSMUST00000116079	processed_pseudogene		X	1	114198015	739
ENSMUSG00000028149	protein_coding	Rap1gds1	ENSMUST00000196106	nonsense_mediated_decay		3	-1	139075140	2811
ENSMUSG00000020777	protein_coding	Acox1	ENSMUST00000128793	processed_transcript		11	-1	116182416	798
ENSMUSG00000020777	protein_coding	Acox1	ENSMUST00000150549	processed_transcript		11	-1	116181214	954
ENSMUSG00000028149	protein_coding	Rap1gds1	ENSMUST00000200396	protein_coding		3	-1	139075148	2622
ENSMUSG00000030621	protein_coding	Me3	ENSMUST00000032856	protein_coding	principal1	7	1	89632703	4485
ENSMUSG00000028149	protein_coding	Rap1gds1	ENSMUST00000200262	retained_intron		3	-1	138984537	1167
ENSMUSG00000038733	protein_coding	Wdr26	ENSMUST00000162963	protein_coding		1	-1	181211437	6452
ENSMUSG00000028149	protein_coding	Rap1gds1	ENSMUST00000198538	retained_intron		3	-1	139075193	1559
ENSMUSG00000028149	protein_coding	Rap1gds1	ENSMUST00000199152	processed_transcript		3	-1	139074798	362
ENSMUSG00000028149	protein_coding	Rap1gds1	ENSMUST00000195953	retained_intron		3	-1	139075140	1533
ENSMUSG00000030621	protein_coding	Me3	ENSMUST00000159167	retained_intron		7	1	89632886	1807
ENSMUSG00000104724	TEC	Gm43162	ENSMUST00000198292	TEC		3	-1	138978081	1770
ENSMUSG00000020778	protein_coding	Ten1	ENSMUST00000021130	protein_coding	principal1	11	1	116198855	902
ENSMUSG00000030621	protein_coding	Me3	ENSMUST00000159491	nonsense_mediated_decay		7	1	89736731	3463
ENSMUSG00000020778	protein_coding	Ten1	ENSMUST00000124663	retained_intron		11	1	116198898	2092
ENSMUSG00000030621	protein_coding	Me3	ENSMUST00000160995	processed_transcript		7	1	89739917	693
ENSMUSG00000030621	protein_coding	Me3	ENSMUST00000032853	processed_transcript		7	1	89829282	1130
ENSMUSG00000020778	protein_coding	Ten1	ENSMUST00000146066	processed_transcript		11	1	116198959	435
ENSMUSG00000020778	protein_coding	Ten1	ENSMUST00000135460	processed_transcript		11	1	116210934	523
ENSMUSG00000102473	TEC	Gm37243	ENSMUST00000193407	TEC		2	-1	75348705	595
ENSMUSG00000022057	protein_coding	Adamdec1	ENSMUST00000022641	protein_coding	principal1	14	-1	68582095	2442
ENSMUSG00000087504	lincRNA	Gm13658	ENSMUST00000135329	lincRNA		2	1	75436057	929
ENSMUSG00000038733	protein_coding	Wdr26	ENSMUST00000036329	nonsense_mediated_decay		1	-1	181211426	2640
ENSMUSG00000038733	protein_coding	Wdr26	ENSMUST00000159673	nonsense_mediated_decay		1	-1	181184266	751
ENSMUSG00000038733	protein_coding	Wdr26	ENSMUST00000159290	protein_coding		1	-1	181183739	571
ENSMUSG00000038733	protein_coding	Wdr26	ENSMUST00000159698	processed_transcript		1	-1	181184396	615
ENSMUSG00000038733	protein_coding	Wdr26	ENSMUST00000159625	retained_intron		1	-1	181192245	811
ENSMUSG00000038733	protein_coding	Wdr26	ENSMUST00000161531	retained_intron		1	-1	181203251	431
ENSMUSG00000038733	protein_coding	Wdr26	ENSMUST00000162819	protein_coding	principal1	1	-1	181211978	7045
ENSMUSG00000004936	protein_coding	Map2k1	ENSMUST00000005066	protein_coding	principal1	9	-1	64253631	2436
ENSMUSG00000004936	protein_coding	Map2k1	ENSMUST00000147796	retained_intron		9	-1	64187864	844
ENSMUSG00000004936	protein_coding	Map2k1	ENSMUST00000152675	retained_intron		9	-1	64188256	688
ENSMUSG00000004936	protein_coding	Map2k1	ENSMUST00000152535	processed_transcript		9	-1	64195678	597
ENSMUSG00000111160	lincRNA	Gm48855	ENSMUST00000214497	lincRNA		9	1	64228339	2457
ENSMUSG00000081336	processed_pseudogene	Gm15073	ENSMUST00000117432	processed_pseudogene		X	-1	145227779	634
ENSMUSG00000001672	protein_coding	Marveld3	ENSMUST00000001722	protein_coding		8	-1	109962168	1330
ENSMUSG00000082085	processed_pseudogene	Gm6441	ENSMUST00000120983	processed_pseudogene		X	-1	145265526	696
ENSMUSG00000001672	protein_coding	Marveld3	ENSMUST00000051430	protein_coding	principal1	8	-1	109962203	2447
ENSMUSG00000001672	protein_coding	Marveld3	ENSMUST00000155052	retained_intron		8	-1	109962053	554
ENSMUSG00000086576	lincRNA	Gm13660	ENSMUST00000142828	lincRNA		2	-1	75464788	722
ENSMUSG00000117412	TEC	Gm49979	ENSMUST00000234983	TEC		17	1	84784792	3831
ENSMUSG00000041700	protein_coding	Lhfpl1	ENSMUST00000040084	protein_coding	principal1	X	-1	145348950	1830
ENSMUSG00000082152	processed_pseudogene	Gm13655	ENSMUST00000119695	processed_pseudogene		2	-1	75633382	745
ENSMUSG00000041700	protein_coding	Lhfpl1	ENSMUST00000123443	protein_coding		X	-1	145349089	397
ENSMUSG00000110707	processed_pseudogene	Gm45795	ENSMUST00000211847	processed_pseudogene		8	-1	109974352	400
ENSMUSG00000029681	protein_coding	Bcl7b	ENSMUST00000031692	protein_coding	principal1	5	1	135168283	1758
ENSMUSG00000029681	protein_coding	Bcl7b	ENSMUST00000111187	protein_coding		5	1	135168389	564
ENSMUSG00000029681	protein_coding	Bcl7b	ENSMUST00000111188	protein_coding		5	1	135168412	1434
ENSMUSG00000029681	protein_coding	Bcl7b	ENSMUST00000202606	protein_coding		5	1	135168445	546
ENSMUSG00000029681	protein_coding	Bcl7b	ENSMUST00000145329	retained_intron		5	1	135179582	907
ENSMUSG00000031262	protein_coding	Cenpi	ENSMUST00000081064	protein_coding	principal1	X	1	134308084	3227
ENSMUSG00000031262	protein_coding	Cenpi	ENSMUST00000101251	protein_coding	principal1	X	1	134308155	3085
ENSMUSG00000031262	protein_coding	Cenpi	ENSMUST00000129782	protein_coding		X	1	134308199	398
ENSMUSG00000100199	antisense	Gm20324	ENSMUST00000186291	antisense		15	1	82899080	1118
ENSMUSG00000031262	protein_coding	Cenpi	ENSMUST00000144678	processed_transcript		X	1	134311998	3309
ENSMUSG00000044337	protein_coding	Ackr3	ENSMUST00000065587	protein_coding	principal1	1	1	90203980	3065
ENSMUSG00000044337	protein_coding	Ackr3	ENSMUST00000159654	protein_coding		1	1	90204006	404
ENSMUSG00000031262	protein_coding	Cenpi	ENSMUST00000125604	processed_transcript		X	1	134346823	1728
ENSMUSG00000070336	protein_coding	Fbxo47	ENSMUST00000125403	retained_intron		11	-1	97855552	863
ENSMUSG00000022679	protein_coding	Mpv17l	ENSMUST00000128757	protein_coding		16	1	13903161	3089
ENSMUSG00000022679	protein_coding	Mpv17l	ENSMUST00000141971	protein_coding		16	1	13940630	2155
ENSMUSG00000027985	protein_coding	Lef1	ENSMUST00000029611	protein_coding	principal3	3	1	131110471	3482
ENSMUSG00000070336	protein_coding	Fbxo47	ENSMUST00000093939	protein_coding	principal1	11	-1	97884154	2162
ENSMUSG00000022679	protein_coding	Mpv17l	ENSMUST00000124947	protein_coding		16	1	13940644	768
ENSMUSG00000027985	protein_coding	Lef1	ENSMUST00000106341	protein_coding	alternative1	3	1	131110471	3357
ENSMUSG00000027985	protein_coding	Lef1	ENSMUST00000066849	protein_coding	alternative1	3	1	131110471	3398
ENSMUSG00000022679	protein_coding	Mpv17l	ENSMUST00000023360	protein_coding	principal1	16	1	13940665	3087
ENSMUSG00000027985	protein_coding	Lef1	ENSMUST00000136147	retained_intron		3	1	131112797	2066
ENSMUSG00000027985	protein_coding	Lef1	ENSMUST00000098611	protein_coding		3	1	131112797	2298
ENSMUSG00000022679	protein_coding	Mpv17l	ENSMUST00000148966	nonsense_mediated_decay		16	1	13940695	2315
ENSMUSG00000022679	protein_coding	Mpv17l	ENSMUST00000143697	protein_coding		16	1	13940702	580
ENSMUSG00000027985	protein_coding	Lef1	ENSMUST00000132737	retained_intron		3	1	131112806	3656
ENSMUSG00000027985	protein_coding	Lef1	ENSMUST00000200166	retained_intron		3	1	131113814	345
ENSMUSG00000022679	protein_coding	Mpv17l	ENSMUST00000156143	protein_coding		16	1	13941094	389
ENSMUSG00000027985	protein_coding	Lef1	ENSMUST00000198624	processed_transcript		3	1	131113856	918
ENSMUSG00000027481	protein_coding	Bpifb2	ENSMUST00000028983	protein_coding	principal1	2	1	153875045	1730
ENSMUSG00000089818	unprocessed_pseudogene	Gm15950	ENSMUST00000162902	unprocessed_pseudogene		16	-1	13921399	1973
ENSMUSG00000027481	protein_coding	Bpifb2	ENSMUST00000129776	retained_intron		2	1	153875075	551
ENSMUSG00000106086	antisense	Lef1os1	ENSMUST00000196419	antisense		3	-1	131112090	3065
ENSMUSG00000081199	processed_pseudogene	Gm16407	ENSMUST00000122134	processed_pseudogene		X	1	70400497	567
ENSMUSG00000084155	unprocessed_pseudogene	Gm7113	ENSMUST00000120477	unprocessed_pseudogene		X	-1	91863556	958
ENSMUSG00000107906	protein_coding	Eif4a3l2	ENSMUST00000122096	protein_coding	principal1	6	1	116551141	1362
ENSMUSG00000082538	processed_pseudogene	Gm14704	ENSMUST00000120300	processed_pseudogene		X	-1	70404054	874
ENSMUSG00000083994	processed_pseudogene	Gm16465	ENSMUST00000118585	processed_pseudogene		X	-1	91889565	1758
ENSMUSG00000039414	protein_coding	Heatr5b	ENSMUST00000097281	protein_coding	principal1	17	-1	78835324	6388
ENSMUSG00000084193	processed_pseudogene	Gm6823	ENSMUST00000120791	processed_pseudogene		X	-1	70422554	1839
ENSMUSG00000039414	protein_coding	Heatr5b	ENSMUST00000232944	processed_transcript		17	-1	78771208	2255
ENSMUSG00000039414	protein_coding	Heatr5b	ENSMUST00000233850	protein_coding		17	-1	78769064	2158
ENSMUSG00000039414	protein_coding	Heatr5b	ENSMUST00000232947	processed_transcript		17	-1	78835360	4345
ENSMUSG00000039414	protein_coding	Heatr5b	ENSMUST00000233073	retained_intron		17	-1	78796113	741
ENSMUSG00000039414	protein_coding	Heatr5b	ENSMUST00000232917	retained_intron		17	-1	78835364	3680
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000032629	protein_coding	principal1	7	1	55842071	6440
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000173783	protein_coding		7	1	55842072	926
ENSMUSG00000024120	protein_coding	Lrpprc	ENSMUST00000112308	protein_coding	principal1	17	-1	84790558	4393
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000085255	protein_coding		7	1	55842206	4195
ENSMUSG00000040123	protein_coding	Zmym5	ENSMUST00000173954	protein_coding	principal1	14	-1	56811464	5357
ENSMUSG00000024120	protein_coding	Lrpprc	ENSMUST00000162799	processed_transcript		17	-1	84731184	809
ENSMUSG00000040123	protein_coding	Zmym5	ENSMUST00000225699	nonsense_mediated_decay		14	-1	56811697	2455
ENSMUSG00000024120	protein_coding	Lrpprc	ENSMUST00000160011	nonsense_mediated_decay		17	-1	84751262	565
ENSMUSG00000040123	protein_coding	Zmym5	ENSMUST00000224498	processed_transcript		14	-1	56811633	2589
ENSMUSG00000022003	protein_coding	Slc25a30	ENSMUST00000022580	protein_coding	principal1	14	-1	75787037	3588
ENSMUSG00000040123	protein_coding	Zmym5	ENSMUST00000111285	protein_coding	principal1	14	-1	56811716	5351
ENSMUSG00000001366	protein_coding	Fbxo9	ENSMUST00000085311	protein_coding	alternative1	9	-1	78108656	2155
ENSMUSG00000040123	protein_coding	Zmym5	ENSMUST00000039812	protein_coding	principal1	14	-1	56811716	5290
ENSMUSG00000024120	protein_coding	Lrpprc	ENSMUST00000160414	retained_intron		17	-1	84751262	513
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000173497	retained_intron		7	1	55842250	3849
ENSMUSG00000100017	bidirectional_promoter_lncRNA	2410022M11Rik	ENSMUST00000186474	bidirectional_promoter_lncRNA		14	1	56811989	1911
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000163845	protein_coding	principal1	7	1	55842255	4178
ENSMUSG00000022003	protein_coding	Slc25a30	ENSMUST00000226574	retained_intron		14	-1	75786962	1188
ENSMUSG00000001366	protein_coding	Fbxo9	ENSMUST00000001402	protein_coding	principal4	9	-1	78109065	1850
ENSMUSG00000022003	protein_coding	Slc25a30	ENSMUST00000227621	processed_transcript		14	-1	75772328	413
ENSMUSG00000114420	processed_pseudogene	Gm48906	ENSMUST00000225694	processed_pseudogene		14	-1	56837036	745
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000206862	protein_coding		7	1	55871859	2908
ENSMUSG00000022003	protein_coding	Slc25a30	ENSMUST00000227894	protein_coding		14	-1	75787007	444
ENSMUSG00000017697	protein_coding	Ada	ENSMUST00000017841	protein_coding	principal1	2	-1	163750239	1688
ENSMUSG00000001366	protein_coding	Fbxo9	ENSMUST00000159453	retained_intron		9	-1	78084731	477
ENSMUSG00000105358	TEC	Gm43099	ENSMUST00000198943	TEC		3	1	108287881	5241
ENSMUSG00000114500	processed_pseudogene	Gm8983	ENSMUST00000224747	processed_pseudogene		14	1	56865413	943
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000174660	retained_intron		7	1	55896745	719
ENSMUSG00000001366	protein_coding	Fbxo9	ENSMUST00000162451	retained_intron		9	-1	78087636	657
ENSMUSG00000084863	antisense	Gm12523	ENSMUST00000148844	antisense		3	-1	108284843	599
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000173267	retained_intron		7	1	55897074	5111
ENSMUSG00000022003	protein_coding	Slc25a30	ENSMUST00000228528	processed_transcript		14	-1	75787005	357
ENSMUSG00000001366	protein_coding	Fbxo9	ENSMUST00000162310	retained_intron		9	-1	78086565	370
ENSMUSG00000017697	protein_coding	Ada	ENSMUST00000156939	processed_transcript		2	-1	163730866	550
ENSMUSG00000022003	protein_coding	Slc25a30	ENSMUST00000228379	retained_intron		14	-1	75787005	470
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000173384	retained_intron		7	1	55897819	629
ENSMUSG00000001366	protein_coding	Fbxo9	ENSMUST00000159099	protein_coding		9	-1	78108604	1201
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000174793	retained_intron		7	1	55908372	466
ENSMUSG00000022705	protein_coding	Drd3	ENSMUST00000229953	protein_coding	alternative2	16	1	43754026	1712
ENSMUSG00000001366	protein_coding	Fbxo9	ENSMUST00000162625	protein_coding		9	-1	78108587	499
ENSMUSG00000030447	protein_coding	Cyfip1	ENSMUST00000205656	retained_intron		7	1	55928884	1588
ENSMUSG00000022705	protein_coding	Drd3	ENSMUST00000023390	protein_coding	principal2	16	1	43762221	1455
ENSMUSG00000024120	protein_coding	Lrpprc	ENSMUST00000161928	retained_intron		17	-1	84790789	2875
ENSMUSG00000024120	protein_coding	Lrpprc	ENSMUST00000161299	retained_intron		17	-1	84790562	4012
ENSMUSG00000078123	processed_pseudogene	Gm5071	ENSMUST00000104922	processed_pseudogene		X	-1	91932980	1035
ENSMUSG00000024120	protein_coding	Lrpprc	ENSMUST00000159222	processed_transcript		17	-1	84777543	967
ENSMUSG00000022041	protein_coding	Chrna2	ENSMUST00000206455	protein_coding	principal1	14	1	66135039	1933
ENSMUSG00000084269	processed_pseudogene	Gm14784	ENSMUST00000121604	processed_pseudogene		X	-1	92003549	663
ENSMUSG00000041852	protein_coding	Tcf20	ENSMUST00000048966	protein_coding	principal3	15	-1	82912134	7417
ENSMUSG00000022041	protein_coding	Chrna2	ENSMUST00000022620	protein_coding	principal1	14	1	66140933	3554
ENSMUSG00000109745	protein_coding	1700018G05Rik	ENSMUST00000211116	protein_coding	principal1	X	1	102928372	386
ENSMUSG00000062162	protein_coding	Mageb1	ENSMUST00000099471	protein_coding	alternative2	X	-1	92016183	993
ENSMUSG00000062162	protein_coding	Mageb1	ENSMUST00000072269	protein_coding	principal2	X	-1	92016333	1143
ENSMUSG00000041852	protein_coding	Tcf20	ENSMUST00000109510	protein_coding	alternative2	15	-1	82912107	7323
ENSMUSG00000081743	unprocessed_pseudogene	Gm4911	ENSMUST00000119388	unprocessed_pseudogene		X	-1	92080794	945
ENSMUSG00000041852	protein_coding	Tcf20	ENSMUST00000229547	protein_coding		15	-1	82963558	630
ENSMUSG00000021592	protein_coding	Arsk	ENSMUST00000239063	protein_coding	alternative2	13	-1	76098660	3657
ENSMUSG00000041852	protein_coding	Tcf20	ENSMUST00000230403	protein_coding		15	-1	82899811	687
ENSMUSG00000041852	protein_coding	Tcf20	ENSMUST00000229439	protein_coding		15	-1	82987872	412
ENSMUSG00000021592	protein_coding	Arsk	ENSMUST00000225642	processed_transcript		13	-1	76077403	596
ENSMUSG00000083701	unprocessed_pseudogene	Gm4912	ENSMUST00000122212	unprocessed_pseudogene		X	-1	92094742	1044
ENSMUSG00000021592	protein_coding	Arsk	ENSMUST00000224884	retained_intron		13	-1	76098660	2731
ENSMUSG00000100552	lincRNA	Gm29019	ENSMUST00000188623	lincRNA		15	-1	82987830	564
ENSMUSG00000100552	lincRNA	Gm29019	ENSMUST00000186748	lincRNA		15	-1	82987712	287
ENSMUSG00000021592	protein_coding	Arsk	ENSMUST00000224262	processed_transcript		13	-1	76077380	486
ENSMUSG00000021592	protein_coding	Arsk	ENSMUST00000223579	nonsense_mediated_decay		13	-1	76098603	539
ENSMUSG00000021592	protein_coding	Arsk	ENSMUST00000224632	processed_transcript		13	-1	76098561	561
ENSMUSG00000021592	protein_coding	Arsk	ENSMUST00000120573	protein_coding	principal2	13	-1	76098660	3657
ENSMUSG00000080737	processed_pseudogene	Gm6982	ENSMUST00000118752	processed_pseudogene		X	1	92593809	1560
ENSMUSG00000071726	protein_coding	Gm5941	ENSMUST00000096371	protein_coding	principal1	X	1	92489949	560
ENSMUSG00000051046	protein_coding	Olfr214	ENSMUST00000217313	protein_coding	principal1	6	1	116554235	2802
ENSMUSG00000051046	protein_coding	Olfr214	ENSMUST00000215846	protein_coding	principal1	6	1	116554237	2605
ENSMUSG00000051046	protein_coding	Olfr214	ENSMUST00000214699	protein_coding	principal1	6	1	116554235	2610
ENSMUSG00000025597	protein_coding	Klhl4	ENSMUST00000113371	protein_coding	alternative2	X	1	114474333	3566
ENSMUSG00000051046	protein_coding	Olfr214	ENSMUST00000203867	protein_coding	principal1	6	1	116554316	1255
ENSMUSG00000067649	protein_coding	Mageb18	ENSMUST00000113955	protein_coding	principal1	X	-1	92599572	2163
ENSMUSG00000025597	protein_coding	Klhl4	ENSMUST00000040504	protein_coding	principal3	X	1	114474333	3584
ENSMUSG00000051046	protein_coding	Olfr214	ENSMUST00000060204	protein_coding	principal1	6	1	116556405	1008
ENSMUSG00000067649	protein_coding	Mageb18	ENSMUST00000088137	protein_coding	principal1	X	-1	92120771	1571
ENSMUSG00000080155	processed_pseudogene	Gm14777	ENSMUST00000116306	processed_pseudogene		X	1	92429239	176
ENSMUSG00000025597	protein_coding	Klhl4	ENSMUST00000133447	protein_coding		X	1	114474604	2893
ENSMUSG00000081978	processed_pseudogene	Gm14895	ENSMUST00000121858	processed_pseudogene		X	1	114490420	1361
ENSMUSG00000022130	protein_coding	Tgds	ENSMUST00000227350	nonsense_mediated_decay		14	-1	118132744	2153
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000119041	protein_coding	principal1	7	-1	55962245	2979
ENSMUSG00000104966	TEC	Gm43273	ENSMUST00000199649	TEC		5	1	101783078	2594
ENSMUSG00000021725	protein_coding	Parp8	ENSMUST00000022239	protein_coding		13	-1	117025522	3098
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000117812	protein_coding	principal1	7	-1	55962439	3039
ENSMUSG00000021725	protein_coding	Parp8	ENSMUST00000223949	protein_coding	principal1	13	-1	117025395	2965
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000119201	protein_coding	principal1	7	-1	55962450	3925
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000032635	protein_coding	principal1	7	-1	55962476	3197
ENSMUSG00000026639	protein_coding	Lamb3	ENSMUST00000194407	retained_intron		1	1	193207699	1240
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000147950	processed_transcript		7	-1	55962392	743
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000130239	retained_intron		7	-1	55938068	691
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000152649	protein_coding		7	-1	55962476	869
ENSMUSG00000021725	protein_coding	Parp8	ENSMUST00000226107	nonsense_mediated_decay		13	-1	117025273	2728
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000126604	protein_coding		7	-1	55962430	636
ENSMUSG00000074578	processed_transcript	Zfas1	ENSMUST00000189909	antisense		2	1	167062934	738
ENSMUSG00000021725	protein_coding	Parp8	ENSMUST00000225344	nonsense_mediated_decay		13	-1	117025520	636
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000135849	retained_intron		7	-1	55962468	1705
ENSMUSG00000029330	protein_coding	Cds1	ENSMUST00000031273	protein_coding	principal1	5	1	101765130	3924
ENSMUSG00000021725	protein_coding	Parp8	ENSMUST00000224157	retained_intron		13	-1	116924904	2671
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000205773	retained_intron		7	-1	55944947	2820
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000142842	retained_intron		17	1	71182560	3158
ENSMUSG00000074578	processed_transcript	Zfas1	ENSMUST00000143587	retained_intron		2	1	167063219	659
ENSMUSG00000030452	protein_coding	Nipa2	ENSMUST00000143325	protein_coding		7	-1	55962173	431
ENSMUSG00000021725	protein_coding	Parp8	ENSMUST00000225974	nonsense_mediated_decay		13	-1	117025504	631
ENSMUSG00000068747	protein_coding	Sort1	ENSMUST00000135636	protein_coding	alternative2	3	1	108284082	6836
ENSMUSG00000074578	processed_transcript	Zfas1	ENSMUST00000136378	retained_intron		2	1	167063221	731
ENSMUSG00000029330	protein_coding	Cds1	ENSMUST00000132213	retained_intron		5	1	101806548	534
ENSMUSG00000074578	processed_transcript	Zfas1	ENSMUST00000238277	antisense		2	1	167063221	572
ENSMUSG00000108701	TEC	Gm44616	ENSMUST00000206417	TEC		7	-1	55928908	1732
ENSMUSG00000021725	protein_coding	Parp8	ENSMUST00000223833	retained_intron		13	-1	117025537	3436
ENSMUSG00000105632	TEC	Gm43272	ENSMUST00000200599	TEC		5	1	101810492	1584
ENSMUSG00000092526	processed_pseudogene	Gm17907	ENSMUST00000173150	processed_pseudogene		7	-1	55903311	710
ENSMUSG00000074578	processed_transcript	Zfas1	ENSMUST00000125841	retained_intron		2	1	167063223	525
ENSMUSG00000074578	processed_transcript	Zfas1	ENSMUST00000145859	retained_intron		2	1	167063233	560
ENSMUSG00000068747	protein_coding	Sort1	ENSMUST00000102632	protein_coding	principal3	3	1	108284091	6796
ENSMUSG00000050654	protein_coding	Olfr215	ENSMUST00000061723	protein_coding	principal1	6	-1	116584195	4112
ENSMUSG00000075084	protein_coding	Olfr1243	ENSMUST00000144885	protein_coding	principal1	2	-1	89531487	3148
ENSMUSG00000068747	protein_coding	Sort1	ENSMUST00000129755	retained_intron		3	1	108355467	5193
ENSMUSG00000075084	protein_coding	Olfr1243	ENSMUST00000216635	processed_transcript		2	-1	89531483	1455
ENSMUSG00000075084	protein_coding	Olfr1243	ENSMUST00000099775	protein_coding	principal1	2	-1	89528408	918
ENSMUSG00000086989	processed_pseudogene	Gm16441	ENSMUST00000138176	processed_pseudogene		X	-1	70427234	924
ENSMUSG00000071302	protein_coding	2610044O15Rik8	ENSMUST00000190157	protein_coding		8	-1	129234046	1776
ENSMUSG00000071302	protein_coding	2610044O15Rik8	ENSMUST00000191043	protein_coding		8	-1	129234013	504
ENSMUSG00000082770	processed_pseudogene	Gm14722	ENSMUST00000118943	processed_pseudogene		X	-1	70433122	689
ENSMUSG00000071302	protein_coding	2610044O15Rik8	ENSMUST00000188757	protein_coding		8	-1	129234368	413
ENSMUSG00000057778	protein_coding	Cyb5d2	ENSMUST00000079681	protein_coding	principal1	11	-1	72795856	2393
ENSMUSG00000071302	protein_coding	2610044O15Rik8	ENSMUST00000186619	protein_coding	principal1	8	-1	129234018	2337
ENSMUSG00000071302	protein_coding	2610044O15Rik8	ENSMUST00000189965	protein_coding		8	-1	129234406	343
ENSMUSG00000071302	protein_coding	2610044O15Rik8	ENSMUST00000079272	protein_coding		8	-1	129221950	264
ENSMUSG00000000326	protein_coding	Comt	ENSMUST00000115609	protein_coding	principal1	16	-1	18426852	1866
ENSMUSG00000022130	protein_coding	Tgds	ENSMUST00000228543	protein_coding		14	-1	118132755	1594
ENSMUSG00000022130	protein_coding	Tgds	ENSMUST00000022727	protein_coding	principal1	14	-1	118132747	1682
ENSMUSG00000057778	protein_coding	Cyb5d2	ENSMUST00000156294	protein_coding		11	-1	72796142	2158
ENSMUSG00000022130	protein_coding	Tgds	ENSMUST00000228085	retained_intron		14	-1	118132744	350
ENSMUSG00000057778	protein_coding	Cyb5d2	ENSMUST00000141141	processed_transcript		11	-1	72796094	294
ENSMUSG00000057778	protein_coding	Cyb5d2	ENSMUST00000169476	retained_intron		11	-1	72795841	2953
ENSMUSG00000108138	processed_pseudogene	Gm18485	ENSMUST00000203788	processed_pseudogene		6	-1	116622524	1114
ENSMUSG00000000326	protein_coding	Comt	ENSMUST00000000335	protein_coding	principal1	16	-1	18426604	1397
ENSMUSG00000000326	protein_coding	Comt	ENSMUST00000147720	protein_coding		16	-1	18413494	743
ENSMUSG00000022131	protein_coding	Gpr180	ENSMUST00000022728	protein_coding	principal1	14	1	118137158	1875
ENSMUSG00000000326	protein_coding	Comt	ENSMUST00000165430	protein_coding	principal1	16	-1	18413494	1978
ENSMUSG00000048865	protein_coding	Arhgap30	ENSMUST00000056449	protein_coding	principal1	1	1	171388954	4494
ENSMUSG00000048865	protein_coding	Arhgap30	ENSMUST00000131607	retained_intron		1	1	171388954	5017
ENSMUSG00000033963	protein_coding	Fancd2os	ENSMUST00000125139	nonsense_mediated_decay		6	-1	113600715	1150
ENSMUSG00000048865	protein_coding	Arhgap30	ENSMUST00000135312	retained_intron		1	1	171388954	4644
ENSMUSG00000033963	protein_coding	Fancd2os	ENSMUST00000035870	protein_coding	principal1	6	-1	113600715	1358
ENSMUSG00000065968	protein_coding	Ifitm7	ENSMUST00000230206	processed_transcript		16	-1	13986888	553
ENSMUSG00000048865	protein_coding	Arhgap30	ENSMUST00000194914	retained_intron		1	1	171388999	3789
ENSMUSG00000065968	protein_coding	Ifitm7	ENSMUST00000117803	protein_coding	principal5	16	-1	13986855	853
ENSMUSG00000082713	processed_pseudogene	Gm14721	ENSMUST00000121381	processed_pseudogene		X	-1	70436933	525
ENSMUSG00000065968	protein_coding	Ifitm7	ENSMUST00000178021	protein_coding	alternative2	16	-1	13984621	1823
ENSMUSG00000107786	processed_pseudogene	Gm44232	ENSMUST00000204537	processed_pseudogene		6	-1	113564865	225
ENSMUSG00000039501	protein_coding	Znfx1	ENSMUST00000048988	protein_coding	principal1	2	-1	167063015	7218
ENSMUSG00000026639	protein_coding	Lamb3	ENSMUST00000194677	protein_coding	principal1	1	1	193207725	4867
ENSMUSG00000039501	protein_coding	Znfx1	ENSMUST00000067584	protein_coding		2	-1	167043495	4147
ENSMUSG00000039501	protein_coding	Znfx1	ENSMUST00000155281	protein_coding		2	-1	167060425	2751
ENSMUSG00000026639	protein_coding	Lamb3	ENSMUST00000192322	protein_coding		1	1	193207732	1029
ENSMUSG00000026639	protein_coding	Lamb3	ENSMUST00000162977	processed_transcript		1	1	193207750	258
ENSMUSG00000039501	protein_coding	Znfx1	ENSMUST00000128676	protein_coding		2	-1	167062716	2695
ENSMUSG00000044117	protein_coding	Bmerb1	ENSMUST00000056521	protein_coding	principal1	16	1	13986604	2394
ENSMUSG00000026639	protein_coding	Lamb3	ENSMUST00000193128	processed_transcript		1	1	193273338	355
ENSMUSG00000032397	protein_coding	Tipin	ENSMUST00000215031	protein_coding		9	1	64281581	352
ENSMUSG00000026639	protein_coding	Lamb3	ENSMUST00000016315	protein_coding	principal1	1	1	193301993	4056
ENSMUSG00000044117	protein_coding	Bmerb1	ENSMUST00000118412	protein_coding		16	1	13986657	954
ENSMUSG00000039501	protein_coding	Znfx1	ENSMUST00000135967	retained_intron		2	-1	167062639	2904
ENSMUSG00000032397	protein_coding	Tipin	ENSMUST00000213165	protein_coding		9	1	64281583	400
ENSMUSG00000044117	protein_coding	Bmerb1	ENSMUST00000131608	protein_coding		16	1	13986674	493
ENSMUSG00000032397	protein_coding	Tipin	ENSMUST00000213289	protein_coding		9	1	64281585	353
ENSMUSG00000026639	protein_coding	Lamb3	ENSMUST00000162180	processed_transcript		1	1	193302221	260
ENSMUSG00000081986	processed_pseudogene	Gm14841	ENSMUST00000121067	processed_pseudogene		X	1	102979888	758
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000023029	protein_coding	principal1	15	1	81663889	3487
ENSMUSG00000026639	protein_coding	Lamb3	ENSMUST00000159955	protein_coding	principal1	1	1	193302243	4013
ENSMUSG00000032397	protein_coding	Tipin	ENSMUST00000216594	protein_coding	principal1	9	1	64281603	1841
ENSMUSG00000083536	processed_pseudogene	Gm15808	ENSMUST00000119046	processed_pseudogene		16	1	14067403	604
ENSMUSG00000032397	protein_coding	Tipin	ENSMUST00000034964	protein_coding	principal1	9	1	64281607	1211
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000174229	protein_coding		15	1	81663934	2578
ENSMUSG00000110926	processed_pseudogene	Gm5917	ENSMUST00000217638	processed_pseudogene		9	1	55518569	721
ENSMUSG00000082277	processed_pseudogene	Gm15807	ENSMUST00000119880	processed_pseudogene		16	-1	14038861	1128
ENSMUSG00000115774	lincRNA	4933431J24Rik	ENSMUST00000227898	lincRNA		14	1	118209378	3315
ENSMUSG00000082554	processed_pseudogene	Gm15806	ENSMUST00000120696	processed_pseudogene		16	-1	14011716	955
ENSMUSG00000026639	protein_coding	Lamb3	ENSMUST00000161526	processed_transcript		1	1	193320695	461
ENSMUSG00000083775	processed_pseudogene	Gm14837	ENSMUST00000119688	processed_pseudogene		X	-1	102998245	206
ENSMUSG00000115774	lincRNA	4933431J24Rik	ENSMUST00000227956	lincRNA		14	1	118212298	261
ENSMUSG00000109133	TEC	Gm45098	ENSMUST00000207179	TEC		7	1	66723119	657
ENSMUSG00000089683	antisense	4930570N18Rik	ENSMUST00000159273	antisense		1	1	193203038	332
ENSMUSG00000104348	TEC	Gm37691	ENSMUST00000192147	TEC		1	1	193281271	2573
ENSMUSG00000081779	processed_pseudogene	Gm21998	ENSMUST00000117552	processed_pseudogene		X	-1	103005031	1308
ENSMUSG00000108846	TEC	Gm10623	ENSMUST00000209081	TEC		7	1	66737804	2639
ENSMUSG00000084842	processed_pseudogene	Pabpc1l2b-ps	ENSMUST00000124538	processed_pseudogene		X	1	103013698	690
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000172620	retained_intron		15	1	81663954	4645
ENSMUSG00000009633	protein_coding	G0s2	ENSMUST00000009777	protein_coding	principal1	1	-1	193273217	871
ENSMUSG00000117595	lincRNA	Gm49981	ENSMUST00000235108	lincRNA		17	-1	84840296	678
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000172568	nonsense_mediated_decay		15	1	81663956	3727
ENSMUSG00000090534	lincRNA	Gm4675	ENSMUST00000164755	lincRNA		14	1	118236232	2322
ENSMUSG00000090534	lincRNA	Gm4675	ENSMUST00000163396	lincRNA		14	1	118236880	502
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000172748	protein_coding		15	1	81663956	3368
ENSMUSG00000090534	lincRNA	Gm4675	ENSMUST00000169262	lincRNA		14	1	118253716	388
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000174274	processed_transcript		15	1	81664001	970
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000173105	retained_intron		15	1	81668678	329
ENSMUSG00000061517	protein_coding	Sox21	ENSMUST00000170662	protein_coding	principal1	14	-1	118237030	3799
ENSMUSG00000059878	protein_coding	Zfp422	ENSMUST00000079749	protein_coding	principal1	6	-1	116628999	3187
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000173607	processed_transcript		15	1	81668747	456
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000174497	protein_coding		15	1	81675522	716
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000174401	retained_intron		15	1	81682009	752
ENSMUSG00000059878	protein_coding	Zfp422	ENSMUST00000112880	protein_coding	principal1	6	-1	116628701	2523
ENSMUSG00000022394	protein_coding	L3mbtl2	ENSMUST00000173761	retained_intron		15	1	81686022	548
ENSMUSG00000068009	protein_coding	Bpifb6	ENSMUST00000088955	protein_coding	principal1	2	1	153900388	1669
ENSMUSG00000059878	protein_coding	Zfp422	ENSMUST00000057540	protein_coding	principal1	6	-1	116628922	2375
ENSMUSG00000068009	protein_coding	Bpifb6	ENSMUST00000135501	protein_coding		2	1	153900395	870
ENSMUSG00000059878	protein_coding	Zfp422	ENSMUST00000204557	processed_transcript		6	-1	116626699	398
ENSMUSG00000063765	protein_coding	Chadl	ENSMUST00000173598	nonsense_mediated_decay		15	-1	81694028	3278
ENSMUSG00000063765	protein_coding	Chadl	ENSMUST00000072910	protein_coding	principal1	15	-1	81697287	2548
ENSMUSG00000063765	protein_coding	Chadl	ENSMUST00000173898	nonsense_mediated_decay		15	-1	81694207	1095
ENSMUSG00000063765	protein_coding	Chadl	ENSMUST00000230849	retained_intron		15	-1	81695535	1412
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000191011	protein_coding	alternative1	7	-1	105581653	2712
ENSMUSG00000092325	processed_pseudogene	Gm18284	ENSMUST00000172604	processed_pseudogene		15	-1	81674878	619
ENSMUSG00000032318	protein_coding	Isl2	ENSMUST00000175950	protein_coding		9	1	55538672	637
ENSMUSG00000070306	protein_coding	Ccdc153	ENSMUST00000216995	retained_intron		9	1	44240676	626
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000216925	protein_coding	principal1	9	1	57910979	1319
ENSMUSG00000032318	protein_coding	Isl2	ENSMUST00000034869	protein_coding	principal1	9	1	55541148	1854
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000213654	protein_coding		9	1	57911008	687
ENSMUSG00000032318	protein_coding	Isl2	ENSMUST00000164373	nonsense_mediated_decay		9	1	55541207	1535
ENSMUSG00000032318	protein_coding	Isl2	ENSMUST00000114290	nonsense_mediated_decay		9	1	55541207	1532
ENSMUSG00000032318	protein_coding	Isl2	ENSMUST00000165302	retained_intron		9	1	55542336	529
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000188368	protein_coding		7	-1	105568777	1970
ENSMUSG00000090270	antisense	Gm17226	ENSMUST00000171441	antisense		9	-1	55540547	420
ENSMUSG00000090270	antisense	Gm17226	ENSMUST00000166637	antisense		9	-1	55540888	780
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000215592	processed_transcript		9	1	57911008	730
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000217132	protein_coding		9	1	57911032	880
ENSMUSG00000016194	protein_coding	Hsd11b1	ENSMUST00000016338	protein_coding	principal1	1	-1	193242629	1623
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000216841	protein_coding	principal1	9	1	57911034	1426
ENSMUSG00000016194	protein_coding	Hsd11b1	ENSMUST00000160929	protein_coding		1	-1	193241598	1256
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000214086	protein_coding		9	1	57911051	469
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000217129	protein_coding		9	1	57911109	675
ENSMUSG00000041688	protein_coding	Amot	ENSMUST00000125271	protein_coding		X	-1	145487046	6364
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000216260	protein_coding		9	1	57911710	534
ENSMUSG00000041688	protein_coding	Amot	ENSMUST00000138187	protein_coding		X	-1	145487094	2392
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000217180	nonsense_mediated_decay		9	1	57912634	550
ENSMUSG00000041688	protein_coding	Amot	ENSMUST00000112835	protein_coding	alternative2	X	-1	145505144	6519
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000215751	retained_intron		9	1	57919166	471
ENSMUSG00000041688	protein_coding	Amot	ENSMUST00000143610	protein_coding		X	-1	145505181	2207
ENSMUSG00000016194	protein_coding	Hsd11b1	ENSMUST00000161737	protein_coding	principal1	1	-1	193264075	1355
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000215936	retained_intron		9	1	57920072	617
ENSMUSG00000041688	protein_coding	Amot	ENSMUST00000135832	retained_intron		X	-1	145461912	619
ENSMUSG00000055720	protein_coding	Ubl7	ENSMUST00000163329	protein_coding	principal1	9	1	57910986	1364
ENSMUSG00000041688	protein_coding	Amot	ENSMUST00000112836	protein_coding	principal2	X	-1	145487639	6957
ENSMUSG00000082070	processed_pseudogene	Gm1866	ENSMUST00000120701	processed_pseudogene		X	-1	114592524	477
ENSMUSG00000092109	protein_coding	Gm9376	ENSMUST00000171107	protein_coding	principal1	14	1	118266960	729
ENSMUSG00000016194	protein_coding	Hsd11b1	ENSMUST00000159644	protein_coding		1	-1	193243561	836
ENSMUSG00000081354	processed_pseudogene	Gm14894	ENSMUST00000117170	processed_pseudogene		X	1	114662197	270
ENSMUSG00000016194	protein_coding	Hsd11b1	ENSMUST00000161406	protein_coding		1	-1	193240410	398
ENSMUSG00000115258	lincRNA	Gm32093	ENSMUST00000227592	lincRNA		14	1	118322977	438
ENSMUSG00000016194	protein_coding	Hsd11b1	ENSMUST00000191977	retained_intron		1	-1	193239023	1978
ENSMUSG00000083561	processed_pseudogene	Gm5942	ENSMUST00000120046	processed_pseudogene		X	-1	114774757	439
ENSMUSG00000016194	protein_coding	Hsd11b1	ENSMUST00000162842	processed_transcript		1	-1	193241424	715
ENSMUSG00000116122	processed_pseudogene	Gm49537	ENSMUST00000230413	processed_pseudogene		15	-1	81209160	436
ENSMUSG00000103736	antisense	Gm37650	ENSMUST00000193570	antisense		1	-1	193290889	248
ENSMUSG00000096997	lincRNA	Gm26791	ENSMUST00000180942	lincRNA		14	1	118363732	1605
ENSMUSG00000103089	TEC	Gm38118	ENSMUST00000192052	TEC		1	-1	193261837	2222
ENSMUSG00000081160	processed_pseudogene	Gm14897	ENSMUST00000118213	processed_pseudogene		X	1	114857887	207
ENSMUSG00000099911	lincRNA	1700044C05Rik	ENSMUST00000186060	lincRNA		14	1	118365878	898
ENSMUSG00000115515	processed_pseudogene	Gm5672	ENSMUST00000226188	processed_pseudogene		14	-1	118376194	934
ENSMUSG00000096458	protein_coding	Moap1	ENSMUST00000173760	protein_coding	principal1	12	-1	102743645	1312
ENSMUSG00000050435	protein_coding	Ube2dnl1	ENSMUST00000059509	protein_coding	principal1	X	1	114905012	743
ENSMUSG00000100104	processed_pseudogene	Gm5644	ENSMUST00000122039	processed_pseudogene		X	-1	145602301	465
ENSMUSG00000096458	protein_coding	Moap1	ENSMUST00000178384	protein_coding	principal1	12	-1	102743661	1284
ENSMUSG00000081646	processed_pseudogene	Gm15060	ENSMUST00000119550	processed_pseudogene		X	1	145646506	948
ENSMUSG00000039050	protein_coding	Osbpl2	ENSMUST00000040668	protein_coding	principal1	2	1	180119306	2805
ENSMUSG00000039050	protein_coding	Osbpl2	ENSMUST00000140210	processed_transcript		2	1	180119335	348
ENSMUSG00000082773	processed_pseudogene	Gm15058	ENSMUST00000117689	processed_pseudogene		X	-1	145753956	458
ENSMUSG00000096751	processed_transcript	Gm28373	ENSMUST00000178129	processed_transcript		12	-1	102727333	2724
ENSMUSG00000050164	protein_coding	Mchr1	ENSMUST00000166855	protein_coding	principal1	15	1	81235499	2189
ENSMUSG00000102953	TEC	Gm37019	ENSMUST00000192133	TEC		12	-1	102591410	2134
ENSMUSG00000039050	protein_coding	Osbpl2	ENSMUST00000142376	retained_intron		2	1	180119404	1688
ENSMUSG00000080915	processed_pseudogene	Gm6446	ENSMUST00000120604	processed_pseudogene		X	1	145833317	818
ENSMUSG00000039050	protein_coding	Osbpl2	ENSMUST00000124225	retained_intron		2	1	180149379	1301
ENSMUSG00000050668	protein_coding	Gpatch11	ENSMUST00000233775	processed_transcript		17	1	78835567	394
ENSMUSG00000047079	protein_coding	Ube2dnl2	ENSMUST00000062695	protein_coding	principal1	X	1	114907582	743
ENSMUSG00000046675	protein_coding	Tmem251	ENSMUST00000057416	protein_coding	principal1	12	1	102743762	3367
ENSMUSG00000083375	processed_pseudogene	Gm15057	ENSMUST00000121516	processed_pseudogene		X	1	145990742	534
ENSMUSG00000085619	lincRNA	4930555B12Rik	ENSMUST00000135444	lincRNA		X	1	114926989	283
ENSMUSG00000083908	processed_pseudogene	Gm6447	ENSMUST00000118905	processed_pseudogene		X	1	145994291	835
ENSMUSG00000095174	antisense	Gm20069	ENSMUST00000178938	antisense		12	1	102612680	545
ENSMUSG00000082440	processed_pseudogene	Gm4914	ENSMUST00000119757	processed_pseudogene		X	1	114948913	459
ENSMUSG00000114106	processed_pseudogene	Gm47042	ENSMUST00000221771	processed_pseudogene		12	-1	102764712	390
ENSMUSG00000080755	processed_pseudogene	Gm15062	ENSMUST00000120567	processed_pseudogene		X	1	146068808	367
ENSMUSG00000009828	protein_coding	Cilk1	ENSMUST00000044551	protein_coding	principal2	9	1	78113315	6560
ENSMUSG00000050668	protein_coding	Gpatch11	ENSMUST00000233113	protein_coding		17	1	78835567	401
ENSMUSG00000083960	processed_pseudogene	Gm4918	ENSMUST00000119420	processed_pseudogene		X	1	146095376	1084
ENSMUSG00000009828	protein_coding	Cilk1	ENSMUST00000142776	retained_intron		9	1	78113241	3040
ENSMUSG00000082260	processed_pseudogene	Gm7429	ENSMUST00000118664	processed_pseudogene		X	-1	114981317	348
ENSMUSG00000009828	protein_coding	Cilk1	ENSMUST00000009972	protein_coding		9	1	78113284	873
ENSMUSG00000040016	protein_coding	Ptger3	ENSMUST00000041175	protein_coding	principal2	3	1	157566892	3148
ENSMUSG00000081738	processed_pseudogene	Hmgb1-ps2	ENSMUST00000117548	processed_pseudogene		X	1	146175942	636
ENSMUSG00000040016	protein_coding	Ptger3	ENSMUST00000196682	retained_intron		3	1	157566900	3577
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000190369	protein_coding		7	-1	105569297	1882
ENSMUSG00000040016	protein_coding	Ptger3	ENSMUST00000173533	protein_coding	alternative2	3	1	157566900	2097
ENSMUSG00000084161	processed_pseudogene	Gm15061	ENSMUST00000121076	processed_pseudogene		X	1	146264952	1046
ENSMUSG00000050668	protein_coding	Gpatch11	ENSMUST00000170759	protein_coding	principal1	17	1	78835589	4134
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000189072	protein_coding		7	-1	105569513	2085
ENSMUSG00000034023	protein_coding	Fancd2	ENSMUST00000036340	protein_coding	principal3	6	1	113531682	5512
ENSMUSG00000009828	protein_coding	Cilk1	ENSMUST00000118869	protein_coding	principal2	9	1	78109192	2540
ENSMUSG00000050668	protein_coding	Gpatch11	ENSMUST00000233545	retained_intron		17	1	78835594	1889
ENSMUSG00000083971	processed_pseudogene	Gm5943	ENSMUST00000119458	processed_pseudogene		X	1	114989150	459
ENSMUSG00000081197	processed_pseudogene	Gm15076	ENSMUST00000117076	processed_pseudogene		X	1	146519232	474
ENSMUSG00000050668	protein_coding	Gpatch11	ENSMUST00000233913	retained_intron		17	1	78843594	522
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000191601	protein_coding	principal4	7	-1	105581278	2690
ENSMUSG00000009828	protein_coding	Cilk1	ENSMUST00000142402	retained_intron		9	1	78155323	3952
ENSMUSG00000081718	processed_pseudogene	Gm8261	ENSMUST00000119275	processed_pseudogene		X	-1	146600958	1208
ENSMUSG00000009828	protein_coding	Cilk1	ENSMUST00000117330	protein_coding	alternative2	9	1	78113300	2698
ENSMUSG00000034023	protein_coding	Fancd2	ENSMUST00000143535	retained_intron		6	1	113531704	680
ENSMUSG00000115970	lincRNA	8430426J06Rik	ENSMUST00000230860	lincRNA		15	-1	81251862	926
ENSMUSG00000037369	protein_coding	Kdm6a	ENSMUST00000044484	protein_coding	principal1	X	1	18162575	5918
ENSMUSG00000084147	processed_pseudogene	Gm15075	ENSMUST00000122187	processed_pseudogene		X	-1	146652514	477
ENSMUSG00000115970	lincRNA	8430426J06Rik	ENSMUST00000229383	lincRNA		15	-1	81247968	814
ENSMUSG00000009828	protein_coding	Cilk1	ENSMUST00000149821	processed_transcript		9	1	78112843	735
ENSMUSG00000034023	protein_coding	Fancd2	ENSMUST00000101051	retained_intron		6	1	113531704	2142
ENSMUSG00000115970	lincRNA	8430426J06Rik	ENSMUST00000229855	lincRNA		15	-1	81247888	971
ENSMUSG00000009828	protein_coding	Cilk1	ENSMUST00000125615	protein_coding		9	1	78109235	409
ENSMUSG00000034023	protein_coding	Fancd2	ENSMUST00000204827	protein_coding	alternative2	6	1	113531704	4707
ENSMUSG00000115970	lincRNA	8430426J06Rik	ENSMUST00000230042	lincRNA		15	-1	81312866	682
ENSMUSG00000082594	processed_pseudogene	Gm15074	ENSMUST00000117603	processed_pseudogene		X	1	146654675	936
ENSMUSG00000034023	protein_coding	Fancd2	ENSMUST00000142453	retained_intron		6	1	113551824	391
ENSMUSG00000037369	protein_coding	Kdm6a	ENSMUST00000052368	protein_coding		X	1	18162575	5935
ENSMUSG00000083452	processed_pseudogene	Gm14905	ENSMUST00000122351	processed_pseudogene		X	-1	115283443	639
ENSMUSG00000034023	protein_coding	Fancd2	ENSMUST00000123738	protein_coding		6	1	113551828	738
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000188001	nonsense_mediated_decay		7	-1	105568956	2060
ENSMUSG00000084061	processed_pseudogene	Gm4996	ENSMUST00000122042	processed_pseudogene		X	1	146932685	784
ENSMUSG00000034023	protein_coding	Fancd2	ENSMUST00000129462	nonsense_mediated_decay		6	1	113568672	564
ENSMUSG00000080965	processed_pseudogene	Gm6461	ENSMUST00000120015	processed_pseudogene		X	-1	115444031	633
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000189378	protein_coding	alternative1	7	-1	105581491	2878
ENSMUSG00000041712	protein_coding	Ubr7	ENSMUST00000046404	protein_coding	principal1	12	1	102757967	3261
ENSMUSG00000034023	protein_coding	Fancd2	ENSMUST00000124262	retained_intron		6	1	113583418	764
ENSMUSG00000081034	processed_pseudogene	Gm5944	ENSMUST00000118182	processed_pseudogene		X	-1	115459894	1001
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000189265	protein_coding		7	-1	105569292	1429
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000205119	nonsense_mediated_decay		6	-1	143100090	4149
ENSMUSG00000045608	protein_coding	Dbx2	ENSMUST00000054244	protein_coding	principal1	15	-1	95655960	3460
ENSMUSG00000100006	lincRNA	Gm21971	ENSMUST00000180187	lincRNA		12	-1	102727322	337
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000187057	protein_coding		7	-1	105568777	1630
ENSMUSG00000106632	lincRNA	Gm33466	ENSMUST00000199819	lincRNA		3	-1	157726408	1689
ENSMUSG00000037369	protein_coding	Kdm6a	ENSMUST00000225738	retained_intron		X	1	18162637	1049
ENSMUSG00000083663	processed_pseudogene	Gm14903	ENSMUST00000122435	processed_pseudogene		X	1	115574818	537
ENSMUSG00000045608	protein_coding	Dbx2	ENSMUST00000229611	processed_transcript		15	-1	95632828	477
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000211614	protein_coding		7	-1	105567143	719
ENSMUSG00000106419	processed_pseudogene	Gm5550	ENSMUST00000198658	processed_pseudogene		3	-1	157817795	1076
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000191250	retained_intron		7	-1	105565505	553
ENSMUSG00000081124	processed_pseudogene	Gm14906	ENSMUST00000119265	processed_pseudogene		X	1	115682136	390
ENSMUSG00000104862	processed_pseudogene	Gm6520	ENSMUST00000200636	processed_pseudogene		3	-1	157888874	410
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000186814	nonsense_mediated_decay		7	-1	105567294	1062
ENSMUSG00000116058	processed_pseudogene	Gm8843	ENSMUST00000230585	processed_pseudogene		15	1	95715193	1102
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000188440	protein_coding		7	-1	105581192	783
ENSMUSG00000091931	protein_coding	Gon7	ENSMUST00000173969	protein_coding	principal1	12	-1	102757800	1152
ENSMUSG00000115458	processed_pseudogene	Gm48931	ENSMUST00000228454	processed_pseudogene		14	1	75841486	229
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000187721	protein_coding		7	-1	105568963	830
ENSMUSG00000115569	lincRNA	Gm49169	ENSMUST00000226370	lincRNA		15	-1	95753732	1466
ENSMUSG00000083352	processed_pseudogene	Gm14907	ENSMUST00000121948	processed_pseudogene		X	1	115808537	854
ENSMUSG00000091931	protein_coding	Gon7	ENSMUST00000179263	protein_coding		12	-1	102757803	525
ENSMUSG00000115699	lincRNA	Gm6961	ENSMUST00000226312	lincRNA		15	-1	95751591	535
ENSMUSG00000037369	protein_coding	Kdm6a	ENSMUST00000223885	nonsense_mediated_decay		X	1	18162643	3717
ENSMUSG00000084053	processed_pseudogene	Gm14904	ENSMUST00000117067	processed_pseudogene		X	1	116198189	335
ENSMUSG00000085829	antisense	Gm4285	ENSMUST00000131222	antisense		14	-1	75844964	902
ENSMUSG00000037369	protein_coding	Kdm6a	ENSMUST00000130978	retained_intron		X	1	18162648	4193
ENSMUSG00000028197	protein_coding	Col24a1	ENSMUST00000029848	protein_coding	principal1	3	1	145292472	7143
ENSMUSG00000043329	processed_pseudogene	Gm8849	ENSMUST00000058951	processed_pseudogene		15	1	95775754	480
ENSMUSG00000037369	protein_coding	Kdm6a	ENSMUST00000224255	protein_coding		X	1	18246045	710
ENSMUSG00000041716	protein_coding	Gm20604	ENSMUST00000174651	protein_coding	principal1	12	-1	102758672	2795
ENSMUSG00000028197	protein_coding	Col24a1	ENSMUST00000139001	protein_coding		3	1	145292527	330
ENSMUSG00000037369	protein_coding	Kdm6a	ENSMUST00000224084	protein_coding		X	1	18246273	1107
ENSMUSG00000037369	protein_coding	Kdm6a	ENSMUST00000225336	protein_coding		X	1	18246296	3219
ENSMUSG00000028197	protein_coding	Col24a1	ENSMUST00000127379	processed_transcript		3	1	145515368	620
ENSMUSG00000098530	protein_coding	Gm28051	ENSMUST00000179306	protein_coding	principal1	12	-1	102757765	445
ENSMUSG00000028197	protein_coding	Col24a1	ENSMUST00000142441	retained_intron		3	1	145544973	1777
ENSMUSG00000072995	protein_coding	Cpxcr1	ENSMUST00000101269	protein_coding	principal1	X	1	116448944	1596
ENSMUSG00000037369	protein_coding	Kdm6a	ENSMUST00000226046	retained_intron		X	1	18247518	791
ENSMUSG00000037369	protein_coding	Kdm6a	ENSMUST00000155161	retained_intron		X	1	18274512	1535
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000187683	protein_coding		7	-1	105569265	681
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000156570	protein_coding		17	1	71183556	1586
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000210079	protein_coding		7	-1	105569271	540
ENSMUSG00000032777	protein_coding	Gtf3c1	ENSMUST00000205659	protein_coding	alternative2	7	-1	125707677	6570
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000149973	retained_intron		17	1	71183723	677
ENSMUSG00000082482	protein_coding	H2ab2	ENSMUST00000118616	protein_coding	principal1	X	1	116681178	348
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000187051	protein_coding		7	-1	105569273	490
ENSMUSG00000105619	antisense	9530034A14Rik	ENSMUST00000197919	antisense		3	-1	145418044	1083
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000186868	protein_coding		7	-1	105569592	439
ENSMUSG00000031660	protein_coding	Brd7	ENSMUST00000034085	protein_coding	principal1	8	-1	88362194	3625
ENSMUSG00000105959	sense_overlapping	D530037P16Rik	ENSMUST00000199255	sense_overlapping		3	1	145419326	1027
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000190961	retained_intron		7	-1	105568670	457
ENSMUSG00000043295	processed_pseudogene	Gm16373	ENSMUST00000129517	processed_pseudogene		X	1	116886881	303
ENSMUSG00000032777	protein_coding	Gtf3c1	ENSMUST00000055506	protein_coding	principal2	7	-1	125707780	6961
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000188726	protein_coding		7	-1	105581188	618
ENSMUSG00000117631	unprocessed_pseudogene	Gm9400	ENSMUST00000234899	unprocessed_pseudogene		17	1	84852538	483
ENSMUSG00000080954	processed_pseudogene	Gm14919	ENSMUST00000120839	processed_pseudogene		X	1	116896951	390
ENSMUSG00000032777	protein_coding	Gtf3c1	ENSMUST00000206042	retained_intron		7	-1	125649977	2609
ENSMUSG00000117451	processed_pseudogene	Gm49982	ENSMUST00000234338	processed_pseudogene		17	-1	84902569	354
ENSMUSG00000031660	protein_coding	Brd7	ENSMUST00000139675	retained_intron		8	-1	88335487	1746
ENSMUSG00000032777	protein_coding	Gtf3c1	ENSMUST00000206183	nonsense_mediated_decay		7	-1	125655891	691
ENSMUSG00000039041	protein_coding	Adrm1	ENSMUST00000061437	protein_coding	principal1	2	1	180171485	1535
ENSMUSG00000031660	protein_coding	Brd7	ENSMUST00000135471	processed_transcript		8	-1	88362014	511
ENSMUSG00000067441	protein_coding	H2ab1	ENSMUST00000122446	protein_coding	principal1	X	1	117014757	348
ENSMUSG00000039041	protein_coding	Adrm1	ENSMUST00000155357	retained_intron		2	1	180171595	500
ENSMUSG00000037032	protein_coding	Apbb1	ENSMUST00000081165	protein_coding	alternative1	7	-1	105574402	2530
ENSMUSG00000080852	processed_pseudogene	Gm14918	ENSMUST00000118153	processed_pseudogene		X	-1	117310508	268
ENSMUSG00000031660	protein_coding	Brd7	ENSMUST00000146370	processed_transcript		8	-1	88333921	422
ENSMUSG00000032777	protein_coding	Gtf3c1	ENSMUST00000205697	retained_intron		7	-1	125707760	4066
ENSMUSG00000032777	protein_coding	Gtf3c1	ENSMUST00000205444	nonsense_mediated_decay		7	-1	125707742	3337
ENSMUSG00000052105	protein_coding	Mtcl1	ENSMUST00000086693	protein_coding	principal1	17	-1	66449750	7221
ENSMUSG00000039041	protein_coding	Adrm1	ENSMUST00000147341	retained_intron		2	1	180171606	723
ENSMUSG00000032777	protein_coding	Gtf3c1	ENSMUST00000206694	nonsense_mediated_decay		7	-1	125668992	746
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000206328	protein_coding	principal1	7	-1	31055409	545
ENSMUSG00000031660	protein_coding	Brd7	ENSMUST00000145609	processed_transcript		8	-1	88342756	636
ENSMUSG00000032777	protein_coding	Gtf3c1	ENSMUST00000205827	retained_intron		7	-1	125669759	1968
ENSMUSG00000039041	protein_coding	Adrm1	ENSMUST00000128029	retained_intron		2	1	180171606	2576
ENSMUSG00000031660	protein_coding	Brd7	ENSMUST00000149841	processed_transcript		8	-1	88342834	667
ENSMUSG00000032777	protein_coding	Gtf3c1	ENSMUST00000205347	retained_intron		7	-1	125699497	2438
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000205807	protein_coding		7	-1	31055594	539
ENSMUSG00000032777	protein_coding	Gtf3c1	ENSMUST00000206127	protein_coding		7	-1	125706536	712
ENSMUSG00000031660	protein_coding	Brd7	ENSMUST00000131748	processed_transcript		8	-1	88332919	508
ENSMUSG00000116125	antisense	Gm41361	ENSMUST00000230187	antisense		15	1	80012331	629
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000205917	retained_intron		7	-1	31053532	668
ENSMUSG00000057963	protein_coding	Itpk1	ENSMUST00000046518	protein_coding	principal1	12	-1	102704930	2918
ENSMUSG00000039041	protein_coding	Adrm1	ENSMUST00000152540	retained_intron		2	1	180171614	2612
ENSMUSG00000070306	protein_coding	Ccdc153	ENSMUST00000092426	protein_coding	principal2	9	1	44240676	1087
ENSMUSG00000104087	TEC	Gm38277	ENSMUST00000195172	TEC		1	-1	90228526	1367
ENSMUSG00000052105	protein_coding	Mtcl1	ENSMUST00000097291	protein_coding		17	-1	66449750	7274
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000206012	protein_coding	principal1	7	-1	31054800	501
ENSMUSG00000057963	protein_coding	Itpk1	ENSMUST00000179417	processed_transcript		12	-1	102594077	482
ENSMUSG00000070306	protein_coding	Ccdc153	ENSMUST00000217221	protein_coding		9	1	44240698	342
ENSMUSG00000039041	protein_coding	Adrm1	ENSMUST00000145230	processed_transcript		2	1	180171659	1067
ENSMUSG00000038264	protein_coding	Sema7a	ENSMUST00000214314	nonsense_mediated_decay		9	1	57940112	417
ENSMUSG00000039041	protein_coding	Adrm1	ENSMUST00000147383	retained_intron		2	1	180172154	4131
ENSMUSG00000052105	protein_coding	Mtcl1	ENSMUST00000145347	protein_coding		17	-1	66385910	5463
ENSMUSG00000101951	lincRNA	Gm28721	ENSMUST00000187649	lincRNA		1	-1	90260120	918
ENSMUSG00000070306	protein_coding	Ccdc153	ENSMUST00000213891	protein_coding	alternative2	9	1	44240700	792
ENSMUSG00000057963	protein_coding	Itpk1	ENSMUST00000191320	protein_coding		12	-1	102640934	421
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000206305	protein_coding	principal1	7	-1	31055667	568
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000129635	protein_coding	principal3	17	1	71183978	5640
ENSMUSG00000039041	protein_coding	Adrm1	ENSMUST00000152850	retained_intron		2	1	180175355	713
ENSMUSG00000052105	protein_coding	Mtcl1	ENSMUST00000177034	protein_coding		17	-1	66439032	5441
ENSMUSG00000070306	protein_coding	Ccdc153	ENSMUST00000217510	protein_coding		9	1	44240732	740
ENSMUSG00000057963	protein_coding	Itpk1	ENSMUST00000179210	protein_coding		12	-1	102695802	418
ENSMUSG00000086917	lincRNA	Gm11630	ENSMUST00000152825	lincRNA		11	1	97884594	382
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000206030	protein_coding		7	-1	31053122	338
ENSMUSG00000052105	protein_coding	Mtcl1	ENSMUST00000129525	retained_intron		17	-1	66346545	612
ENSMUSG00000057963	protein_coding	Itpk1	ENSMUST00000178697	protein_coding		12	-1	102704914	355
ENSMUSG00000070306	protein_coding	Ccdc153	ENSMUST00000216632	protein_coding	alternative2	9	1	44240834	800
ENSMUSG00000070306	protein_coding	Ccdc153	ENSMUST00000215554	protein_coding		9	1	44241052	519
ENSMUSG00000039209	protein_coding	Rpl39l	ENSMUST00000121292	protein_coding	principal1	16	1	10170226	550
ENSMUSG00000070306	protein_coding	Ccdc153	ENSMUST00000215711	protein_coding		9	1	44241663	580
ENSMUSG00000070306	protein_coding	Ccdc153	ENSMUST00000216047	retained_intron		9	1	44243327	675
ENSMUSG00000039209	protein_coding	Rpl39l	ENSMUST00000044103	protein_coding	principal1	16	1	10170228	805
ENSMUSG00000052105	protein_coding	Mtcl1	ENSMUST00000134139	retained_intron		17	-1	66378931	2423
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000206317	retained_intron		7	-1	31052193	255
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000205778	protein_coding	principal1	7	-1	31054788	438
ENSMUSG00000038264	protein_coding	Sema7a	ENSMUST00000043059	protein_coding	principal1	9	1	57940113	3297
ENSMUSG00000000489	protein_coding	Pdgfb	ENSMUST00000000500	protein_coding	principal1	15	-1	80014808	2944
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000108110	protein_coding	principal1	7	-1	31054807	492
ENSMUSG00000104528	TEC	Gm43314	ENSMUST00000196744	TEC		3	-1	157897191	2231
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000206860	protein_coding	principal1	7	-1	31054818	594
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000135589	nonsense_mediated_decay		17	1	71204654	1430
ENSMUSG00000000489	protein_coding	Pdgfb	ENSMUST00000229912	protein_coding		15	-1	80013203	652
ENSMUSG00000081134	processed_pseudogene	Gm14913	ENSMUST00000120011	processed_pseudogene		X	-1	117418836	1093
ENSMUSG00000052105	protein_coding	Mtcl1	ENSMUST00000144492	processed_transcript		17	-1	66378444	839
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000206474	protein_coding	principal1	7	-1	31055582	572
ENSMUSG00000000489	protein_coding	Pdgfb	ENSMUST00000229795	protein_coding		15	-1	80013203	384
ENSMUSG00000052105	protein_coding	Mtcl1	ENSMUST00000142154	retained_intron		17	-1	66378058	784
ENSMUSG00000052105	protein_coding	Mtcl1	ENSMUST00000129841	processed_transcript		17	-1	66374664	685
ENSMUSG00000000489	protein_coding	Pdgfb	ENSMUST00000229168	retained_intron		15	-1	80014977	2163
ENSMUSG00000083345	processed_pseudogene	Gm6491	ENSMUST00000118273	processed_pseudogene		X	1	117525212	990
ENSMUSG00000052105	protein_coding	Mtcl1	ENSMUST00000127259	retained_intron		17	-1	66448369	611
ENSMUSG00000100780	lincRNA	Gm28579	ENSMUST00000186143	lincRNA		X	1	117534546	369
ENSMUSG00000080774	processed_pseudogene	Gm9143	ENSMUST00000120745	processed_pseudogene		X	1	103037624	745
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000126681	protein_coding	alternative2	17	1	71204676	4167
ENSMUSG00000093686	processed_pseudogene	Gm4705	ENSMUST00000177415	processed_pseudogene		17	-1	66413984	354
ENSMUSG00000083602	processed_pseudogene	Gm14911	ENSMUST00000120803	processed_pseudogene		X	-1	117664882	989
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000130750	retained_intron		17	1	71231433	887
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000140150	retained_intron		17	1	71238662	357
ENSMUSG00000084283	processed_pseudogene	Gm14914	ENSMUST00000117576	processed_pseudogene		X	1	117706498	2031
ENSMUSG00000054135	lincRNA	A430110L20Rik	ENSMUST00000181680	lincRNA		1	1	181225986	2513
ENSMUSG00000028179	protein_coding	Cth	ENSMUST00000118539	protein_coding	principal1	3	-1	157925077	1815
ENSMUSG00000054135	lincRNA	A430110L20Rik	ENSMUST00000066988	lincRNA		1	1	181226076	2415
ENSMUSG00000028179	protein_coding	Cth	ENSMUST00000129805	processed_transcript		3	-1	157897712	675
ENSMUSG00000028179	protein_coding	Cth	ENSMUST00000198009	retained_intron		3	-1	157905725	610
ENSMUSG00000081214	processed_pseudogene	Rpl35a-ps2	ENSMUST00000117444	processed_pseudogene		1	-1	181242320	333
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000071697	protein_coding	principal1	7	-1	31054819	522
ENSMUSG00000027531	protein_coding	Impa1	ENSMUST00000065938	protein_coding	principal1	3	-1	10331439	4185
ENSMUSG00000028179	protein_coding	Cth	ENSMUST00000125028	retained_intron		3	-1	157925051	681
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000205439	protein_coding	principal1	7	-1	31055708	535
ENSMUSG00000027531	protein_coding	Impa1	ENSMUST00000118410	protein_coding		3	-1	10331439	2988
ENSMUSG00000103260	processed_pseudogene	Gm8146	ENSMUST00000192106	processed_pseudogene		1	1	181282046	1847
ENSMUSG00000027531	protein_coding	Impa1	ENSMUST00000191670	protein_coding		3	-1	10331372	1100
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000205542	retained_intron		7	-1	31054045	315
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000154507	nonsense_mediated_decay		17	1	71238672	1112
ENSMUSG00000027531	protein_coding	Impa1	ENSMUST00000195155	retained_intron		3	-1	10316652	734
ENSMUSG00000030510	protein_coding	Cers3	ENSMUST00000066475	protein_coding		7	1	66743504	3250
ENSMUSG00000027531	protein_coding	Impa1	ENSMUST00000128912	protein_coding		3	-1	10331132	283
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000206522	retained_intron		7	-1	31055623	575
ENSMUSG00000097604	lincRNA	Gm17322	ENSMUST00000181289	lincRNA		9	1	57998041	2169
ENSMUSG00000030510	protein_coding	Cers3	ENSMUST00000208521	protein_coding	principal1	7	1	66764169	1159
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000205392	retained_intron		7	-1	31057199	628
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000133156	retained_intron		17	1	71240606	819
ENSMUSG00000058921	protein_coding	Slc10a5	ENSMUST00000078748	protein_coding	principal1	3	-1	10335656	3923
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000053173	retained_intron		17	1	71240707	619
ENSMUSG00000107428	TEC	Gm44154	ENSMUST00000204559	TEC		6	1	116630222	2724
ENSMUSG00000060268	protein_coding	Armh1	ENSMUST00000165128	protein_coding	principal1	4	-1	117251917	1836
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000156565	retained_intron		17	1	71242400	2797
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000117217	protein_coding	alternative1	12	-1	83921934	3549
ENSMUSG00000032323	protein_coding	Cyp11a1	ENSMUST00000188116	protein_coding		9	1	58006411	539
ENSMUSG00000036570	protein_coding	Fxyd1	ENSMUST00000039909	protein_coding	principal1	7	-1	31055656	620
ENSMUSG00000103392	protein_coding	Gm38303	ENSMUST00000192603	nonsense_mediated_decay	principal1	3	-1	10335681	536
ENSMUSG00000024052	protein_coding	Lpin2	ENSMUST00000125665	retained_intron		17	1	71246031	978
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000110298	nonsense_mediated_decay		12	-1	83876810	3435
ENSMUSG00000089888	processed_pseudogene	Gm16547	ENSMUST00000159474	processed_pseudogene		1	-1	181400756	293
ENSMUSG00000102276	TEC	2900069G24Rik	ENSMUST00000192780	TEC		1	1	181381178	1311
ENSMUSG00000032323	protein_coding	Cyp11a1	ENSMUST00000034874	protein_coding	principal1	9	1	58014671	2120
ENSMUSG00000032323	protein_coding	Cyp11a1	ENSMUST00000188944	retained_intron		9	1	58014997	3439
ENSMUSG00000060268	protein_coding	Armh1	ENSMUST00000077500	retained_intron		4	-1	117251917	1426
ENSMUSG00000032323	protein_coding	Cyp11a1	ENSMUST00000188539	protein_coding		9	1	58017396	848
ENSMUSG00000060268	protein_coding	Armh1	ENSMUST00000130660	processed_transcript		4	-1	117252125	618
ENSMUSG00000086482	processed_transcript	1700012C08Rik	ENSMUST00000141554	processed_transcript		4	-1	117213782	363
ENSMUSG00000064210	protein_coding	Ano6	ENSMUST00000071874	protein_coding	principal1	15	1	95790843	4927
ENSMUSG00000027656	protein_coding	Ccn5	ENSMUST00000029188	protein_coding	principal1	2	1	163820889	1719
ENSMUSG00000081659	processed_pseudogene	Gm14917	ENSMUST00000118872	processed_pseudogene		X	-1	117872640	2105
ENSMUSG00000064210	protein_coding	Ano6	ENSMUST00000226936	processed_transcript		15	1	95790888	3292
ENSMUSG00000027656	protein_coding	Ccn5	ENSMUST00000138730	processed_transcript		2	1	163820861	903
ENSMUSG00000064210	protein_coding	Ano6	ENSMUST00000227791	protein_coding		15	1	95790892	3149
ENSMUSG00000084324	processed_pseudogene	Gm6500	ENSMUST00000119412	processed_pseudogene		X	-1	117886891	451
ENSMUSG00000064210	protein_coding	Ano6	ENSMUST00000226682	retained_intron		15	1	95790896	480
ENSMUSG00000082403	processed_pseudogene	Gm14916	ENSMUST00000121904	processed_pseudogene		X	-1	117887222	204
ENSMUSG00000095110	lincRNA	1700003E24Rik	ENSMUST00000088134	lincRNA		X	1	93156154	577
ENSMUSG00000064210	protein_coding	Ano6	ENSMUST00000227151	nonsense_mediated_decay		15	1	95790933	4134
ENSMUSG00000081466	processed_pseudogene	Gm14912	ENSMUST00000120166	processed_pseudogene		X	-1	117889885	1773
ENSMUSG00000064210	protein_coding	Ano6	ENSMUST00000226932	retained_intron		15	1	95791010	647
ENSMUSG00000084138	processed_pseudogene	Gm14915	ENSMUST00000120747	processed_pseudogene		X	-1	117903140	204
ENSMUSG00000064210	protein_coding	Ano6	ENSMUST00000226793	protein_coding		15	1	95800722	633
ENSMUSG00000048772	protein_coding	Tmem53	ENSMUST00000062824	protein_coding	principal1	4	1	117251951	991
ENSMUSG00000064210	protein_coding	Ano6	ENSMUST00000226761	retained_intron		15	1	95938594	3490
ENSMUSG00000048772	protein_coding	Tmem53	ENSMUST00000106434	protein_coding		4	1	117252042	923
ENSMUSG00000081268	processed_pseudogene	Gm14909	ENSMUST00000117853	processed_pseudogene		X	-1	118121372	351
ENSMUSG00000073139	protein_coding	Tmem185a	ENSMUST00000101506	protein_coding		X	-1	70477180	2429
ENSMUSG00000115049	processed_transcript	Gm49172	ENSMUST00000227616	processed_transcript		15	-1	95994129	935
ENSMUSG00000048772	protein_coding	Tmem53	ENSMUST00000106433	protein_coding		4	1	117252340	913
ENSMUSG00000035238	protein_coding	Kcnk15	ENSMUST00000109396	protein_coding	alternative2	2	1	163853733	1921
ENSMUSG00000115522	antisense	Gm49173	ENSMUST00000226780	antisense		15	-1	95804401	357
ENSMUSG00000083031	processed_pseudogene	Gm14910	ENSMUST00000121037	processed_pseudogene		X	-1	118232987	1805
ENSMUSG00000048772	protein_coding	Tmem53	ENSMUST00000145836	processed_transcript		4	1	117265371	1298
ENSMUSG00000035238	protein_coding	Kcnk15	ENSMUST00000044798	protein_coding	principal2	2	1	163853651	1199
ENSMUSG00000048772	protein_coding	Tmem53	ENSMUST00000125943	protein_coding		4	1	117252040	922
ENSMUSG00000073139	protein_coding	Tmem185a	ENSMUST00000114630	protein_coding	principal1	X	-1	70477180	1307
ENSMUSG00000078648	antisense	Gm17546	ENSMUST00000168960	antisense		15	-1	95830072	733
ENSMUSG00000048772	protein_coding	Tmem53	ENSMUST00000154449	processed_transcript		4	1	117252062	300
ENSMUSG00000096153	lincRNA	BC061195	ENSMUST00000088133	lincRNA		X	1	93183227	577
ENSMUSG00000097643	antisense	A130051J06Rik	ENSMUST00000180649	antisense		15	-1	95791642	2618
ENSMUSG00000044548	protein_coding	Dact1	ENSMUST00000061273	protein_coding		12	1	71309884	3650
ENSMUSG00000073139	protein_coding	Tmem185a	ENSMUST00000154400	processed_transcript		X	-1	70470179	736
ENSMUSG00000114378	protein_coding	Gm49355	ENSMUST00000225871	protein_coding	principal1	14	1	12283976	3124
ENSMUSG00000100194	protein_coding	Tgif2lx2	ENSMUST00000072518	protein_coding	principal1	X	1	118427227	1030
ENSMUSG00000073139	protein_coding	Tmem185a	ENSMUST00000134954	processed_transcript		X	-1	70477142	728
ENSMUSG00000097574	transcribed_unprocessed_pseudogene	C920006O11Rik	ENSMUST00000180974	processed_transcript		9	1	78175914	1444
ENSMUSG00000097574	transcribed_unprocessed_pseudogene	C920006O11Rik	ENSMUST00000238210	transcribed_unprocessed_pseudogene		9	1	78176590	281
ENSMUSG00000044548	protein_coding	Dact1	ENSMUST00000150639	protein_coding	principal1	12	1	71309984	2448
ENSMUSG00000087109	processed_transcript	4930474H06Rik	ENSMUST00000132822	processed_transcript		12	-1	71321660	1590
ENSMUSG00000100133	protein_coding	Tgif2lx1	ENSMUST00000073857	protein_coding	principal1	X	-1	118480737	1030
ENSMUSG00000035277	protein_coding	Arx	ENSMUST00000187010	retained_intron		X	1	93286445	1938
ENSMUSG00000114865	protein_coding	Gm29776	ENSMUST00000224691	protein_coding	principal5	14	-1	54698833	2342
ENSMUSG00000114865	protein_coding	Gm29776	ENSMUST00000227947	protein_coding	alternative2	14	-1	54698800	1142
ENSMUSG00000032348	protein_coding	Gsta4	ENSMUST00000213215	protein_coding		9	1	78182774	743
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000085215	nonsense_mediated_decay		12	-1	83921844	3468
ENSMUSG00000115943	antisense	Gm49455	ENSMUST00000230210	antisense		16	-1	10227524	671
ENSMUSG00000116187	processed_pseudogene	Gm49456	ENSMUST00000229819	processed_pseudogene		16	1	10238166	351
ENSMUSG00000032348	protein_coding	Gsta4	ENSMUST00000034903	protein_coding	principal1	9	1	78191947	977
ENSMUSG00000035277	protein_coding	Arx	ENSMUST00000046565	protein_coding	principal1	X	1	93286496	2881
ENSMUSG00000111015	processed_pseudogene	Gm3126	ENSMUST00000216513	processed_pseudogene		9	-1	78214845	1468
ENSMUSG00000035277	protein_coding	Arx	ENSMUST00000113947	protein_coding	principal1	X	1	93286510	2454
ENSMUSG00000022404	protein_coding	Slc25a17	ENSMUST00000023040	protein_coding	principal1	15	-1	81360812	1724
ENSMUSG00000034218	protein_coding	Atm	ENSMUST00000118282	protein_coding	alternative2	9	-1	53533966	9819
ENSMUSG00000022404	protein_coding	Slc25a17	ENSMUST00000231140	nonsense_mediated_decay		15	-1	81360777	843
ENSMUSG00000022404	protein_coding	Slc25a17	ENSMUST00000229564	processed_transcript		15	-1	81325047	384
ENSMUSG00000074183	protein_coding	Gsta1	ENSMUST00000098537	protein_coding	principal1	9	1	78230656	875
ENSMUSG00000034218	protein_coding	Atm	ENSMUST00000232179	protein_coding	principal2	9	-1	53536740	9787
ENSMUSG00000074183	protein_coding	Gsta1	ENSMUST00000127192	retained_intron		9	1	78235003	683
ENSMUSG00000034218	protein_coding	Atm	ENSMUST00000126598	retained_intron		9	-1	53442560	281
ENSMUSG00000034218	protein_coding	Atm	ENSMUST00000132249	protein_coding		9	-1	53453617	602
ENSMUSG00000110919	unprocessed_pseudogene	Dppa5b	ENSMUST00000214261	unprocessed_pseudogene		9	1	78245550	348
ENSMUSG00000031631	protein_coding	Cfap97	ENSMUST00000154040	protein_coding		8	1	46151771	776
ENSMUSG00000034218	protein_coding	Atm	ENSMUST00000132403	retained_intron		9	-1	53536673	1243
ENSMUSG00000075318	protein_coding	Scn2a	ENSMUST00000144254	protein_coding		2	1	65620771	1810
ENSMUSG00000034218	protein_coding	Atm	ENSMUST00000150244	protein_coding		9	-1	53536608	643
ENSMUSG00000111709	protein_coding	Gm3776	ENSMUST00000217203	protein_coding	principal1	9	1	78257129	874
ENSMUSG00000022404	protein_coding	Slc25a17	ENSMUST00000229617	retained_intron		15	-1	81360799	869
ENSMUSG00000091549	processed_pseudogene	Gm6548	ENSMUST00000167498	processed_pseudogene		17	-1	78851956	1165
ENSMUSG00000035226	protein_coding	Rims4	ENSMUST00000044734	protein_coding	principal1	2	-1	163918683	4962
ENSMUSG00000022404	protein_coding	Slc25a17	ENSMUST00000230309	nonsense_mediated_decay		15	-1	81360727	384
ENSMUSG00000022404	protein_coding	Slc25a17	ENSMUST00000230983	nonsense_mediated_decay		15	-1	81344157	211
ENSMUSG00000090801	processed_pseudogene	Gm4862	ENSMUST00000170405	processed_pseudogene		3	-1	139128771	438
ENSMUSG00000022404	protein_coding	Slc25a17	ENSMUST00000231078	retained_intron		15	-1	81360773	629
ENSMUSG00000026641	protein_coding	Usf1	ENSMUST00000159207	protein_coding		1	1	171411313	721
ENSMUSG00000111423	unprocessed_pseudogene	Dppa5c	ENSMUST00000216268	unprocessed_pseudogene		9	1	78271998	348
ENSMUSG00000081171	processed_pseudogene	Gm7485	ENSMUST00000119502	processed_pseudogene		X	-1	118698903	1109
ENSMUSG00000031631	protein_coding	Cfap97	ENSMUST00000034048	protein_coding	principal2	8	1	46163651	4619
ENSMUSG00000026641	protein_coding	Usf1	ENSMUST00000001284	nonsense_mediated_decay		1	1	171411313	1115
ENSMUSG00000031631	protein_coding	Cfap97	ENSMUST00000145080	retained_intron		8	1	46163692	1430
ENSMUSG00000008590	protein_coding	Htr3b	ENSMUST00000008734	protein_coding	principal1	9	-1	48964990	2411
ENSMUSG00000031631	protein_coding	Cfap97	ENSMUST00000145229	protein_coding		8	1	46163715	1166
ENSMUSG00000031631	protein_coding	Cfap97	ENSMUST00000110376	protein_coding	alternative2	8	1	46163735	2043
ENSMUSG00000032849	protein_coding	Abcc4	ENSMUST00000036554	protein_coding	principal3	14	-1	118706205	5715
ENSMUSG00000102526	TEC	Gm37785	ENSMUST00000195783	TEC		1	1	185329451	2408
ENSMUSG00000031631	protein_coding	Cfap97	ENSMUST00000164504	protein_coding	principal2	8	1	46169556	4521
ENSMUSG00000109902	TEC	Gm45693	ENSMUST00000211391	TEC		8	1	46162090	1157
ENSMUSG00000075318	protein_coding	Scn2a	ENSMUST00000028377	protein_coding	principal3	2	1	65620771	8935
ENSMUSG00000086279	sense_intronic	Gm15634	ENSMUST00000147206	sense_intronic		8	1	46152610	492
ENSMUSG00000026641	protein_coding	Usf1	ENSMUST00000161241	protein_coding	principal1	1	1	171411313	2167
ENSMUSG00000075318	protein_coding	Scn2a	ENSMUST00000201378	retained_intron		2	1	65620811	2454
ENSMUSG00000026641	protein_coding	Usf1	ENSMUST00000161297	processed_transcript		1	1	171411326	305
ENSMUSG00000075318	protein_coding	Scn2a	ENSMUST00000202653	retained_intron		2	1	65668686	1482
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000163392	protein_coding	principal1	14	1	12284173	2452
ENSMUSG00000026641	protein_coding	Usf1	ENSMUST00000160335	retained_intron		1	1	171411334	779
ENSMUSG00000075318	protein_coding	Scn2a	ENSMUST00000200829	protein_coding	alternative1	2	1	65668765	6348
ENSMUSG00000026641	protein_coding	Usf1	ENSMUST00000159466	retained_intron		1	1	171411374	269
ENSMUSG00000026641	protein_coding	Usf1	ENSMUST00000160486	protein_coding		1	1	171411384	1878
ENSMUSG00000075318	protein_coding	Scn2a	ENSMUST00000138368	retained_intron		2	1	65682280	698
ENSMUSG00000026641	protein_coding	Usf1	ENSMUST00000159929	retained_intron		1	1	171417330	492
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000223762	protein_coding	principal1	14	1	12284222	2292
ENSMUSG00000075318	protein_coding	Scn2a	ENSMUST00000239325	nonsense_mediated_decay		2	1	65683759	1921
ENSMUSG00000026641	protein_coding	Usf1	ENSMUST00000159371	retained_intron		1	1	171417460	696
ENSMUSG00000026641	protein_coding	Usf1	ENSMUST00000167546	protein_coding	principal1	1	1	171411681	1822
ENSMUSG00000075318	protein_coding	Scn2a	ENSMUST00000202508	nonsense_mediated_decay		2	1	65717553	576
ENSMUSG00000103711	protein_coding	Tstd1	ENSMUST00000193060	processed_transcript		1	1	171418872	126
ENSMUSG00000075318	protein_coding	Scn2a	ENSMUST00000202162	nonsense_mediated_decay		2	1	65717576	513
ENSMUSG00000032849	protein_coding	Abcc4	ENSMUST00000226703	processed_transcript		14	-1	118676931	4592
ENSMUSG00000075318	protein_coding	Scn2a	ENSMUST00000100067	protein_coding	principal3	2	1	65670445	8690
ENSMUSG00000032849	protein_coding	Abcc4	ENSMUST00000228848	processed_transcript		14	-1	118699492	3723
ENSMUSG00000074179	protein_coding	Gm10639	ENSMUST00000119823	protein_coding	principal1	9	1	78289923	993
ENSMUSG00000118566	unprocessed_pseudogene	BX284648.1	ENSMUST00000238931	unprocessed_pseudogene		2	-1	65762197	243
ENSMUSG00000103711	protein_coding	Tstd1	ENSMUST00000171362	protein_coding	principal1	1	1	171419033	551
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000224824	processed_transcript		14	1	12284226	454
ENSMUSG00000032849	protein_coding	Abcc4	ENSMUST00000228691	retained_intron		14	-1	118529965	513
ENSMUSG00000032849	protein_coding	Abcc4	ENSMUST00000227480	retained_intron		14	-1	118534255	639
ENSMUSG00000074179	protein_coding	Gm10639	ENSMUST00000121273	protein_coding	principal1	9	1	78289928	873
ENSMUSG00000025234	protein_coding	Arih1	ENSMUST00000171975	protein_coding	principal1	9	-1	59486614	6971
ENSMUSG00000103711	protein_coding	Tstd1	ENSMUST00000194029	retained_intron		1	1	171419719	543
ENSMUSG00000032849	protein_coding	Abcc4	ENSMUST00000166646	protein_coding	alternative2	14	-1	118706219	5504
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000225383	processed_transcript		14	1	12284227	431
ENSMUSG00000025234	protein_coding	Arih1	ENSMUST00000026264	nonsense_mediated_decay		9	-1	59486618	2005
ENSMUSG00000074179	protein_coding	Gm10639	ENSMUST00000126625	retained_intron		9	1	78298018	683
ENSMUSG00000115075	processed_pseudogene	Gm49033	ENSMUST00000227627	processed_pseudogene		14	1	118564072	272
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000224223	retained_intron		14	1	12284232	615
ENSMUSG00000025234	protein_coding	Arih1	ENSMUST00000165322	protein_coding		9	-1	59486347	1431
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000223702	protein_coding		14	1	12284235	900
ENSMUSG00000025234	protein_coding	Arih1	ENSMUST00000171856	nonsense_mediated_decay		9	-1	59405794	437
ENSMUSG00000052435	protein_coding	Cebpe	ENSMUST00000064290	protein_coding	principal1	14	-1	54712174	1241
ENSMUSG00000025234	protein_coding	Arih1	ENSMUST00000168456	retained_intron		9	-1	59406053	669
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000225971	processed_transcript		14	1	12284243	809
ENSMUSG00000026514	protein_coding	Cnih3	ENSMUST00000161880	protein_coding		1	1	181352628	1995
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000225739	processed_transcript		14	1	12284248	336
ENSMUSG00000025234	protein_coding	Arih1	ENSMUST00000168497	retained_intron		9	-1	59486056	827
ENSMUSG00000083747	processed_pseudogene	Gm14727	ENSMUST00000118526	processed_pseudogene		X	1	70503140	525
ENSMUSG00000025234	protein_coding	Arih1	ENSMUST00000168982	retained_intron		9	-1	59486083	465
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000223927	protein_coding		14	1	12284254	1010
ENSMUSG00000024079	protein_coding	Eif2ak2	ENSMUST00000024884	protein_coding	principal1	17	-1	78882573	4313
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000224389	protein_coding	principal1	14	1	12284254	2444
ENSMUSG00000090516	processed_pseudogene	Rps11-ps1	ENSMUST00000171632	processed_pseudogene		9	-1	59472233	475
ENSMUSG00000066463	protein_coding	Omt2a	ENSMUST00000173321	nonsense_mediated_decay		9	-1	78312961	561
ENSMUSG00000024079	protein_coding	Eif2ak2	ENSMUST00000169940	retained_intron		17	-1	78858980	628
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000225294	protein_coding	principal1	14	1	12284258	1191
ENSMUSG00000066463	protein_coding	Omt2a	ENSMUST00000173608	processed_transcript		9	-1	78314001	735
ENSMUSG00000024079	protein_coding	Eif2ak2	ENSMUST00000171852	retained_intron		17	-1	78882548	704
ENSMUSG00000024079	protein_coding	Eif2ak2	ENSMUST00000171451	processed_transcript		17	-1	78882554	574
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000225640	protein_coding		14	1	12284282	462
ENSMUSG00000028177	antisense	1810013D15Rik	ENSMUST00000198623	antisense		3	1	157925220	1311
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000223697	retained_intron		14	1	12284301	915
ENSMUSG00000028177	antisense	1810013D15Rik	ENSMUST00000148898	antisense		3	1	157925269	574
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000224994	processed_transcript		14	1	12285383	361
ENSMUSG00000028177	antisense	1810013D15Rik	ENSMUST00000196971	antisense		3	1	157925711	1450
ENSMUSG00000022329	protein_coding	Stk3	ENSMUST00000018476	protein_coding	principal2	15	-1	35155806	2914
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000223631	protein_coding		14	1	12285383	1014
ENSMUSG00000028177	antisense	1810013D15Rik	ENSMUST00000029827	antisense		3	1	157925271	300
ENSMUSG00000022329	protein_coding	Stk3	ENSMUST00000226555	protein_coding	alternative2	15	-1	35178921	2730
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000225773	protein_coding		14	1	12285386	417
ENSMUSG00000111852	lincRNA	Gm33180	ENSMUST00000217109	lincRNA		9	-1	59512865	1480
ENSMUSG00000022329	protein_coding	Stk3	ENSMUST00000067033	protein_coding		15	-1	35155750	2471
ENSMUSG00000038045	protein_coding	Sult6b1	ENSMUST00000146474	processed_transcript		17	-1	78895100	764
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000225847	protein_coding		14	1	12287381	680
ENSMUSG00000026514	protein_coding	Cnih3	ENSMUST00000027795	protein_coding	principal1	1	1	181352630	2668
ENSMUSG00000022329	protein_coding	Stk3	ENSMUST00000226730	retained_intron		15	-1	34960237	3294
ENSMUSG00000048489	protein_coding	Depp1	ENSMUST00000067354	protein_coding	principal1	6	1	116650609	1339
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000225052	retained_intron		14	1	12300369	2469
ENSMUSG00000022329	protein_coding	Stk3	ENSMUST00000128425	retained_intron		15	-1	34999922	605
ENSMUSG00000035158	protein_coding	Mitf	ENSMUST00000203884	protein_coding	alternative1	6	1	97807052	2113
ENSMUSG00000022329	protein_coding	Stk3	ENSMUST00000138841	nonsense_mediated_decay		15	-1	35155669	773
ENSMUSG00000033111	protein_coding	3830406C13Rik	ENSMUST00000112669	protein_coding		14	1	12284209	2477
ENSMUSG00000035158	protein_coding	Mitf	ENSMUST00000148233	retained_intron		6	1	97807058	1360
ENSMUSG00000038045	protein_coding	Sult6b1	ENSMUST00000042683	protein_coding		17	-1	78906899	839
ENSMUSG00000048489	protein_coding	Depp1	ENSMUST00000178241	protein_coding	principal1	6	1	116650628	1317
ENSMUSG00000038045	protein_coding	Sult6b1	ENSMUST00000159710	nonsense_mediated_decay		17	-1	78906899	834
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000129335	protein_coding	alternative2	12	-1	83842343	1962
ENSMUSG00000114853	lincRNA	D030051J21Rik	ENSMUST00000225919	lincRNA		14	1	12321379	3095
ENSMUSG00000101028	lincRNA	Gm28723	ENSMUST00000188640	lincRNA		1	1	90280458	1001
ENSMUSG00000048489	protein_coding	Depp1	ENSMUST00000204555	protein_coding		6	1	116650696	386
ENSMUSG00000038045	protein_coding	Sult6b1	ENSMUST00000169544	protein_coding	principal1	17	-1	78906992	2060
ENSMUSG00000026514	protein_coding	Cnih3	ENSMUST00000162685	protein_coding		1	1	181353198	602
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000154043	protein_coding	alternative2	12	-1	83842343	1929
ENSMUSG00000104694	TEC	Gm43797	ENSMUST00000198221	TEC		5	1	123684775	532
ENSMUSG00000101997	lincRNA	Gm28722	ENSMUST00000187630	lincRNA		1	-1	90454501	1036
ENSMUSG00000026514	protein_coding	Cnih3	ENSMUST00000209607	protein_coding		1	1	181353426	564
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000021647	protein_coding	principal3	12	-1	83842343	1815
ENSMUSG00000103292	TEC	Gm35048	ENSMUST00000192105	TEC		1	1	90520496	2802
ENSMUSG00000089927	unprocessed_pseudogene	Gm16539	ENSMUST00000160086	unprocessed_pseudogene		1	-1	181432400	327
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000155112	protein_coding		12	-1	83921867	784
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000135962	protein_coding		12	-1	83921856	644
ENSMUSG00000038291	protein_coding	Snx25	ENSMUST00000110378	protein_coding	alternative2	8	-1	46152159	3445
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000136848	protein_coding		12	-1	83921883	567
ENSMUSG00000038291	protein_coding	Snx25	ENSMUST00000041582	protein_coding	principal2	8	-1	46151705	3206
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000126943	protein_coding		12	-1	83921890	429
ENSMUSG00000066463	protein_coding	Omt2a	ENSMUST00000166056	protein_coding	principal4	9	-1	78314016	1167
ENSMUSG00000039200	protein_coding	Atf7ip2	ENSMUST00000044005	protein_coding	principal1	16	1	10192712	2778
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000125089	retained_intron		12	-1	83876798	441
ENSMUSG00000021224	protein_coding	Numb	ENSMUST00000222439	protein_coding		12	-1	83921733	364
ENSMUSG00000066463	protein_coding	Omt2a	ENSMUST00000113376	protein_coding	alternative2	9	-1	78314796	478
ENSMUSG00000038291	protein_coding	Snx25	ENSMUST00000176410	retained_intron		8	-1	46116702	3275
ENSMUSG00000114150	processed_transcript	Gm46367	ENSMUST00000222771	antisense		12	1	83823455	501
ENSMUSG00000114150	processed_transcript	Gm46367	ENSMUST00000221695	retained_intron		12	1	83831832	706
ENSMUSG00000038291	protein_coding	Snx25	ENSMUST00000177186	protein_coding		8	-1	46080284	433
ENSMUSG00000038291	protein_coding	Snx25	ENSMUST00000136097	processed_transcript		8	-1	46056452	641
ENSMUSG00000066463	protein_coding	Omt2a	ENSMUST00000085308	protein_coding		9	-1	78313447	365
ENSMUSG00000039058	protein_coding	Ak5	ENSMUST00000045262	protein_coding	principal1	3	-1	152668360	3323
ENSMUSG00000113141	processed_pseudogene	Gm47748	ENSMUST00000221017	processed_pseudogene		12	1	83848050	342
ENSMUSG00000038291	protein_coding	Snx25	ENSMUST00000110377	nonsense_mediated_decay		8	-1	46124133	769
ENSMUSG00000039058	protein_coding	Ak5	ENSMUST00000200062	protein_coding		3	-1	152526752	755
ENSMUSG00000038291	protein_coding	Snx25	ENSMUST00000144244	protein_coding		8	-1	46089693	447
ENSMUSG00000113423	processed_pseudogene	Gm3791	ENSMUST00000220790	processed_pseudogene		12	-1	83875882	768
ENSMUSG00000021945	protein_coding	Zmym2	ENSMUST00000223669	protein_coding		14	1	56886653	1281
ENSMUSG00000039058	protein_coding	Ak5	ENSMUST00000198552	retained_intron		3	-1	152478515	385
ENSMUSG00000038291	protein_coding	Snx25	ENSMUST00000150645	retained_intron		8	-1	46105189	709
ENSMUSG00000038291	protein_coding	Snx25	ENSMUST00000170416	protein_coding	principal2	8	-1	46124146	3067
ENSMUSG00000039200	protein_coding	Atf7ip2	ENSMUST00000119023	protein_coding		16	1	10192906	1048
ENSMUSG00000090802	unprocessed_pseudogene	Gm8074	ENSMUST00000095071	unprocessed_pseudogene		9	-1	78322354	252
ENSMUSG00000018326	protein_coding	Ywhab	ENSMUST00000018470	protein_coding	principal1	2	1	163994960	3013
ENSMUSG00000097745	antisense	AI115009	ENSMUST00000181093	antisense		3	1	152666913	1853
ENSMUSG00000106430	TEC	Gm42460	ENSMUST00000198863	TEC		5	1	50059096	2567
ENSMUSG00000039200	protein_coding	Atf7ip2	ENSMUST00000117220	protein_coding		16	1	10192922	1230
ENSMUSG00000018326	protein_coding	Ywhab	ENSMUST00000131288	protein_coding		2	1	163995503	849
ENSMUSG00000039200	protein_coding	Atf7ip2	ENSMUST00000100191	protein_coding		16	1	10192926	889
ENSMUSG00000104870	lincRNA	4930448I18Rik	ENSMUST00000197958	lincRNA		5	1	50151333	736
ENSMUSG00000085549	lincRNA	1700047F07Rik	ENSMUST00000140321	lincRNA		4	1	107707034	543
ENSMUSG00000087476	antisense	Rap1gapos	ENSMUST00000135358	antisense		4	-1	137706606	471
ENSMUSG00000060126	protein_coding	Tpt1	ENSMUST00000110894	protein_coding	principal1	14	1	75845093	1169
ENSMUSG00000039200	protein_coding	Atf7ip2	ENSMUST00000133674	retained_intron		16	1	10192947	2166
ENSMUSG00000085549	lincRNA	1700047F07Rik	ENSMUST00000151438	lincRNA		4	1	107689733	391
ENSMUSG00000039200	protein_coding	Atf7ip2	ENSMUST00000230872	protein_coding		16	1	10212806	465
ENSMUSG00000085549	lincRNA	1700047F07Rik	ENSMUST00000143064	lincRNA		4	1	107689701	463
ENSMUSG00000061130	protein_coding	Ppm1b	ENSMUST00000080217	protein_coding	alternative2	17	1	84957999	2670
ENSMUSG00000060126	protein_coding	Tpt1	ENSMUST00000142061	protein_coding		14	1	75845302	996
ENSMUSG00000085549	lincRNA	1700047F07Rik	ENSMUST00000147654	lincRNA		4	1	107707057	386
ENSMUSG00000060126	protein_coding	Tpt1	ENSMUST00000150047	retained_intron		14	1	75845331	890
ENSMUSG00000038750	protein_coding	Omt2b	ENSMUST00000187667	protein_coding	principal1	9	1	78327589	727
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000006854	protein_coding	principal3	9	1	108490602	4791
ENSMUSG00000110280	processed_pseudogene	Gm45497	ENSMUST00000211701	processed_pseudogene		8	1	88391121	740
ENSMUSG00000060126	protein_coding	Tpt1	ENSMUST00000128889	retained_intron		14	1	75845332	478
ENSMUSG00000038750	protein_coding	Omt2b	ENSMUST00000186336	protein_coding		9	1	78328054	254
ENSMUSG00000060126	protein_coding	Tpt1	ENSMUST00000154533	retained_intron		14	1	75845355	762
ENSMUSG00000038750	protein_coding	Omt2b	ENSMUST00000187890	retained_intron		9	1	78328054	1044
ENSMUSG00000106930	processed_pseudogene	Gm6450	ENSMUST00000200896	processed_pseudogene		5	1	93003831	574
ENSMUSG00000021945	protein_coding	Zmym2	ENSMUST00000022511	protein_coding	principal1	14	1	56887819	6974
ENSMUSG00000086766	antisense	Gm15969	ENSMUST00000151967	antisense		4	-1	148914324	236
ENSMUSG00000038750	protein_coding	Omt2b	ENSMUST00000189243	nonsense_mediated_decay		9	1	78328182	573
ENSMUSG00000060126	protein_coding	Tpt1	ENSMUST00000134040	processed_transcript		14	1	75845900	661
ENSMUSG00000060126	protein_coding	Tpt1	ENSMUST00000151751	retained_intron		14	1	75845919	559
ENSMUSG00000086606	antisense	Gm13205	ENSMUST00000123548	antisense		4	-1	148948914	562
ENSMUSG00000038750	protein_coding	Omt2b	ENSMUST00000043734	protein_coding	principal1	9	1	78328030	735
ENSMUSG00000060126	protein_coding	Tpt1	ENSMUST00000125146	retained_intron		14	1	75846185	503
ENSMUSG00000068008	protein_coding	Bpifb3	ENSMUST00000088950	protein_coding	principal1	2	1	153918230	1821
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000166103	protein_coding	alternative2	9	1	108490840	4473
ENSMUSG00000061130	protein_coding	Ppm1b	ENSMUST00000112304	protein_coding	principal3	17	1	84958009	3323
ENSMUSG00000041380	protein_coding	Htr2c	ENSMUST00000149260	retained_intron		X	1	146962513	2966
ENSMUSG00000107610	TEC	D530018E20Rik	ENSMUST00000205107	TEC		6	-1	72895919	958
ENSMUSG00000068008	protein_coding	Bpifb3	ENSMUST00000109760	protein_coding	principal1	2	1	153918394	1741
ENSMUSG00000041380	protein_coding	Htr2c	ENSMUST00000131999	retained_intron		X	1	146962513	3057
ENSMUSG00000045314	protein_coding	Sowahb	ENSMUST00000061328	protein_coding	principal1	5	-1	93045022	3900
ENSMUSG00000061130	protein_coding	Ppm1b	ENSMUST00000234710	retained_intron		17	1	84958376	1320
ENSMUSG00000061130	protein_coding	Ppm1b	ENSMUST00000234332	protein_coding	alternative2	17	1	84958376	1290
ENSMUSG00000021945	protein_coding	Zmym2	ENSMUST00000224922	processed_transcript		14	1	56920765	2829
ENSMUSG00000078925	lincRNA	D030018L15Rik	ENSMUST00000230782	lincRNA		15	-1	96054825	1506
ENSMUSG00000021945	protein_coding	Zmym2	ENSMUST00000225393	retained_intron		14	1	56937536	332
ENSMUSG00000083784	processed_pseudogene	Gm14729	ENSMUST00000118373	processed_pseudogene		X	1	70506952	689
ENSMUSG00000107374	TEC	Gm43172	ENSMUST00000202139	TEC		5	1	93090994	2137
ENSMUSG00000078925	lincRNA	D030018L15Rik	ENSMUST00000139808	lincRNA		15	-1	96079427	1859
ENSMUSG00000021945	protein_coding	Zmym2	ENSMUST00000225282	processed_transcript		14	1	56938401	741
ENSMUSG00000078925	lincRNA	D030018L15Rik	ENSMUST00000140253	lincRNA		15	-1	96079553	2902
ENSMUSG00000107194	TEC	Gm43173	ENSMUST00000202246	TEC		5	-1	93093351	593
ENSMUSG00000078925	lincRNA	D030018L15Rik	ENSMUST00000100271	lincRNA		15	-1	96078134	1775
ENSMUSG00000061130	protein_coding	Ppm1b	ENSMUST00000234540	protein_coding	alternative2	17	1	84965033	1633
ENSMUSG00000021945	protein_coding	Zmym2	ENSMUST00000223965	retained_intron		14	1	56949529	772
ENSMUSG00000021945	protein_coding	Zmym2	ENSMUST00000226025	retained_intron		14	1	56949554	607
ENSMUSG00000061130	protein_coding	Ppm1b	ENSMUST00000234851	protein_coding	alternative2	17	1	84993680	1307
ENSMUSG00000087325	processed_pseudogene	Gm6038	ENSMUST00000154310	processed_pseudogene		X	1	70513048	948
ENSMUSG00000097619	processed_transcript	4833422M21Rik	ENSMUST00000181122	lincRNA		15	-1	96241789	1336
ENSMUSG00000097619	processed_transcript	4833422M21Rik	ENSMUST00000181747	lincRNA		15	-1	96254684	1365
ENSMUSG00000097619	processed_transcript	4833422M21Rik	ENSMUST00000181252	lincRNA		15	-1	96254616	2410
ENSMUSG00000097619	processed_transcript	4833422M21Rik	ENSMUST00000229950	retained_intron		15	-1	96253987	2030
ENSMUSG00000035697	protein_coding	Arhgap45	ENSMUST00000099501	protein_coding	alternative2	10	1	80016653	3948
ENSMUSG00000097536	lincRNA	2610037D02Rik	ENSMUST00000180852	lincRNA		15	-1	96283608	2449
ENSMUSG00000097536	lincRNA	2610037D02Rik	ENSMUST00000185067	lincRNA		15	-1	96284495	2997
ENSMUSG00000086862	antisense	Gm13546	ENSMUST00000138444	antisense		2	1	58164001	989
ENSMUSG00000086862	antisense	Gm13546	ENSMUST00000135735	antisense		2	1	58169737	401
ENSMUSG00000061130	protein_coding	Ppm1b	ENSMUST00000112307	protein_coding	alternative2	17	1	84993673	1499
ENSMUSG00000061130	protein_coding	Ppm1b	ENSMUST00000112305	protein_coding	alternative2	17	1	84956741	1591
ENSMUSG00000097047	bidirectional_promoter_lncRNA	1110020A21Rik	ENSMUST00000234288	bidirectional_promoter_lncRNA		17	-1	84957423	591
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000085044	protein_coding	alternative2	9	1	108490845	4520
ENSMUSG00000097047	bidirectional_promoter_lncRNA	1110020A21Rik	ENSMUST00000234932	bidirectional_promoter_lncRNA		17	-1	84957239	434
ENSMUSG00000097047	bidirectional_promoter_lncRNA	1110020A21Rik	ENSMUST00000181147	bidirectional_promoter_lncRNA		17	-1	84957710	853
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000193678	protein_coding	alternative2	9	1	108490845	4517
ENSMUSG00000035697	protein_coding	Arhgap45	ENSMUST00000140974	retained_intron		10	1	80016739	3970
ENSMUSG00000041380	protein_coding	Htr2c	ENSMUST00000036303	protein_coding	principal1	X	1	146962513	4747
ENSMUSG00000035697	protein_coding	Arhgap45	ENSMUST00000105373	protein_coding	alternative2	10	1	80016916	3867
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000178075	protein_coding	alternative2	9	1	108490856	4512
ENSMUSG00000041380	protein_coding	Htr2c	ENSMUST00000096299	protein_coding	principal1	X	1	146962514	4883
ENSMUSG00000041380	protein_coding	Htr2c	ENSMUST00000156697	protein_coding		X	1	146962514	4654
ENSMUSG00000041380	protein_coding	Htr2c	ENSMUST00000134368	processed_transcript		X	1	146962630	648
ENSMUSG00000041380	protein_coding	Htr2c	ENSMUST00000112831	protein_coding		X	1	146963023	809
ENSMUSG00000035697	protein_coding	Arhgap45	ENSMUST00000043311	protein_coding	principal3	10	1	80019653	3499
ENSMUSG00000086524	processed_pseudogene	Pabpc1l2a-ps	ENSMUST00000128361	processed_pseudogene		X	-1	103067180	513
ENSMUSG00000055239	protein_coding	Kcmf1	ENSMUST00000068697	protein_coding	principal1	6	-1	72899979	3251
ENSMUSG00000055239	protein_coding	Kcmf1	ENSMUST00000204598	protein_coding		6	-1	72899292	1743
ENSMUSG00000035697	protein_coding	Arhgap45	ENSMUST00000150022	retained_intron		10	1	80021743	2980
ENSMUSG00000098630	lincRNA	Gm27198	ENSMUST00000184172	lincRNA		14	-1	118735145	1517
ENSMUSG00000084341	processed_pseudogene	Gm3928	ENSMUST00000121141	processed_pseudogene		X	1	103075919	1307
ENSMUSG00000055239	protein_coding	Kcmf1	ENSMUST00000206378	protein_coding		6	-1	72899703	544
ENSMUSG00000082381	processed_pseudogene	Gm12928	ENSMUST00000117115	processed_pseudogene		4	-1	126477299	573
ENSMUSG00000055239	protein_coding	Kcmf1	ENSMUST00000203004	retained_intron		6	-1	72849413	3044
ENSMUSG00000055239	protein_coding	Kcmf1	ENSMUST00000203431	processed_transcript		6	-1	72858894	393
ENSMUSG00000081567	processed_pseudogene	Gm14838	ENSMUST00000118913	processed_pseudogene		X	1	103083003	248
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000182834	protein_coding		7	-1	116237812	5257
ENSMUSG00000055239	protein_coding	Kcmf1	ENSMUST00000204708	protein_coding		6	-1	72899083	549
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000217046	protein_coding		7	-1	116129525	1713
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000214700	nonsense_mediated_decay		7	-1	116129525	1708
ENSMUSG00000026832	protein_coding	Cytip	ENSMUST00000028175	protein_coding	principal1	2	-1	58160495	6110
ENSMUSG00000048949	processed_pseudogene	Gm6206	ENSMUST00000133472	processed_pseudogene		X	-1	103165407	2199
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000192854	retained_intron		9	1	108492693	1352
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000193558	protein_coding		9	1	108493467	384
ENSMUSG00000020899	protein_coding	Pfas	ENSMUST00000021282	protein_coding	principal1	11	-1	69008460	6373
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000193183	retained_intron		9	1	108494340	525
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000193412	retained_intron		9	1	108494369	753
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000194171	protein_coding		9	1	108494630	3252
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000194499	retained_intron		9	1	108495536	803
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000195763	retained_intron		9	1	108496347	744
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000181998	protein_coding	principal2	7	-1	116308376	5149
ENSMUSG00000020899	protein_coding	Pfas	ENSMUST00000172915	retained_intron		11	-1	68994276	5144
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000194225	retained_intron		9	1	108496989	607
ENSMUSG00000020899	protein_coding	Pfas	ENSMUST00000146490	retained_intron		11	-1	68990606	2584
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000194863	protein_coding		9	1	108497089	885
ENSMUSG00000020899	protein_coding	Pfas	ENSMUST00000152964	protein_coding		11	-1	68991349	1421
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000193571	retained_intron		9	1	108498703	729
ENSMUSG00000020899	protein_coding	Pfas	ENSMUST00000173410	retained_intron		11	-1	68991825	927
ENSMUSG00000006676	protein_coding	Usp19	ENSMUST00000193975	retained_intron		9	1	108500150	1548
ENSMUSG00000020899	protein_coding	Pfas	ENSMUST00000149703	protein_coding		11	-1	68994331	350
ENSMUSG00000025232	protein_coding	Hexa	ENSMUST00000026262	protein_coding	principal1	9	1	59539540	1996
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000097837	protein_coding		4	1	137707522	3168
ENSMUSG00000020899	protein_coding	Pfas	ENSMUST00000172987	retained_intron		11	-1	69008451	2129
ENSMUSG00000084874	processed_pseudogene	Gm12906	ENSMUST00000154610	processed_pseudogene		4	-1	107760465	441
ENSMUSG00000049526	protein_coding	Tmem202	ENSMUST00000055345	protein_coding	principal1	9	-1	59525501	1256
ENSMUSG00000080886	processed_pseudogene	Gm14847	ENSMUST00000121978	processed_pseudogene		X	1	103236125	519
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000105835	protein_coding		4	1	137680753	4140
ENSMUSG00000031289	protein_coding	Il13ra2	ENSMUST00000033646	protein_coding	principal1	X	-1	147429192	2281
ENSMUSG00000087195	lincRNA	Gm12907	ENSMUST00000148027	lincRNA		4	1	107765080	507
ENSMUSG00000098023	processed_pseudogene	Gm19200	ENSMUST00000182579	processed_pseudogene		X	-1	103288970	1001
ENSMUSG00000049526	protein_coding	Tmem202	ENSMUST00000214580	processed_transcript		9	-1	59539847	1126
ENSMUSG00000031289	protein_coding	Il13ra2	ENSMUST00000112827	protein_coding	principal1	X	-1	147403832	1536
ENSMUSG00000049526	protein_coding	Tmem202	ENSMUST00000216061	processed_transcript		9	-1	59525458	534
ENSMUSG00000057933	protein_coding	Gsta2	ENSMUST00000034902	protein_coding	principal1	9	-1	78347158	870
ENSMUSG00000087289	lincRNA	4933424M12Rik	ENSMUST00000203451	lincRNA		4	1	107783720	1100
ENSMUSG00000082229	protein_coding	Nap1l2	ENSMUST00000121720	protein_coding	principal1	X	-1	103186640	2465
ENSMUSG00000087289	lincRNA	4933424M12Rik	ENSMUST00000132609	lincRNA		4	1	107787849	1944
ENSMUSG00000083805	processed_pseudogene	Gm14848	ENSMUST00000121850	processed_pseudogene		X	1	103299110	467
ENSMUSG00000083763	processed_pseudogene	Gm9050	ENSMUST00000119501	processed_pseudogene		X	1	103227705	448
ENSMUSG00000057933	protein_coding	Gsta2	ENSMUST00000125479	protein_coding		9	-1	78355788	809
ENSMUSG00000057933	protein_coding	Gsta2	ENSMUST00000129247	protein_coding		9	-1	78347168	751
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000148054	retained_intron		4	1	137723989	2317
ENSMUSG00000057933	protein_coding	Gsta2	ENSMUST00000140498	processed_transcript		9	-1	78338752	297
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000152567	protein_coding		4	1	137680753	1455
ENSMUSG00000104963	TEC	Gm42974	ENSMUST00000199556	TEC		3	-1	127140490	2654
ENSMUSG00000105119	TEC	Gm43765	ENSMUST00000196303	TEC		3	-1	126987700	893
ENSMUSG00000106446	TEC	Gm42970	ENSMUST00000196407	TEC		3	-1	127299673	1352
ENSMUSG00000105322	TEC	Gm43751	ENSMUST00000200275	TEC		3	-1	127052046	3071
ENSMUSG00000035158	protein_coding	Mitf	ENSMUST00000043637	protein_coding	principal4	6	1	97807058	4881
ENSMUSG00000097456	antisense	Gm16958	ENSMUST00000180603	antisense		3	1	127161304	1765
ENSMUSG00000060461	protein_coding	Dppa5a	ENSMUST00000071991	protein_coding	principal1	9	-1	78368177	619
ENSMUSG00000097456	antisense	Gm16958	ENSMUST00000181792	antisense		3	1	127161338	830
ENSMUSG00000105969	transcribed_processed_pseudogene	Gm42525	ENSMUST00000196257	transcribed_processed_pseudogene		3	-1	127481190	527
ENSMUSG00000105568	TEC	Gm42971	ENSMUST00000199228	TEC		3	-1	127285559	2079
ENSMUSG00000105939	TEC	Gm43322	ENSMUST00000196232	TEC		3	-1	126975867	1612
ENSMUSG00000042129	protein_coding	Rassf4	ENSMUST00000035842	protein_coding	principal2	6	-1	116673952	6460
ENSMUSG00000039068	protein_coding	Zzz3	ENSMUST00000106103	protein_coding	alternative2	3	1	152395473	2674
ENSMUSG00000042129	protein_coding	Rassf4	ENSMUST00000203029	protein_coding	alternative2	6	-1	116673809	1243
ENSMUSG00000032346	protein_coding	Ooep	ENSMUST00000034900	protein_coding	principal1	9	-1	78378725	2138
ENSMUSG00000042129	protein_coding	Rassf4	ENSMUST00000203477	processed_transcript		6	-1	116641002	303
ENSMUSG00000083032	processed_pseudogene	Gm8087	ENSMUST00000119091	processed_pseudogene		9	-1	78389467	567
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000200038	protein_coding		5	1	110135842	606
ENSMUSG00000042129	protein_coding	Rassf4	ENSMUST00000204313	retained_intron		6	-1	116673789	2803
ENSMUSG00000042129	protein_coding	Rassf4	ENSMUST00000203634	retained_intron		6	-1	116647936	481
ENSMUSG00000042129	protein_coding	Rassf4	ENSMUST00000204203	protein_coding		6	-1	116673771	435
ENSMUSG00000015647	protein_coding	Lama5	ENSMUST00000130796	processed_transcript		2	-1	180179643	734
ENSMUSG00000042129	protein_coding	Rassf4	ENSMUST00000204576	protein_coding		6	-1	116673798	375
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000139831	processed_transcript		4	1	137664726	756
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000156683	retained_intron		4	1	137664754	464
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000141306	protein_coding		4	1	137718872	1216
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000123134	retained_intron		4	1	137728181	475
ENSMUSG00000039068	protein_coding	Zzz3	ENSMUST00000138115	retained_intron		3	1	152395525	917
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000144059	retained_intron		4	1	137728211	1022
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000123011	retained_intron		4	1	137727762	703
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000151601	retained_intron		4	1	137725329	441
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000150928	protein_coding		4	1	137680753	1681
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000131536	processed_transcript		4	1	137687418	600
ENSMUSG00000041351	protein_coding	Rap1gap	ENSMUST00000047243	protein_coding	principal1	4	1	137681667	3247
ENSMUSG00000070291	protein_coding	Ddx43	ENSMUST00000113367	protein_coding	principal1	9	1	78395777	2207
ENSMUSG00000090724	antisense	4930542C12Rik	ENSMUST00000171096	antisense		9	-1	78396158	1203
ENSMUSG00000039068	protein_coding	Zzz3	ENSMUST00000106100	protein_coding	principal3	3	1	152396003	7607
ENSMUSG00000039068	protein_coding	Zzz3	ENSMUST00000150802	processed_transcript		3	1	152396032	943
ENSMUSG00000039068	protein_coding	Zzz3	ENSMUST00000197987	processed_transcript		3	1	152396079	588
ENSMUSG00000026832	protein_coding	Cytip	ENSMUST00000148764	processed_transcript		2	-1	58195527	941
ENSMUSG00000026832	protein_coding	Cytip	ENSMUST00000153052	processed_transcript		2	-1	58195532	378
ENSMUSG00000026832	protein_coding	Cytip	ENSMUST00000151169	processed_transcript		2	-1	58160657	387
ENSMUSG00000039068	protein_coding	Zzz3	ENSMUST00000200570	protein_coding	alternative2	3	1	152396132	2491
ENSMUSG00000026832	protein_coding	Cytip	ENSMUST00000151785	processed_transcript		2	-1	58195528	686
ENSMUSG00000026832	protein_coding	Cytip	ENSMUST00000144117	processed_transcript		2	-1	58195517	856
ENSMUSG00000109079	TEC	Gm44755	ENSMUST00000207830	TEC		7	-1	66961918	2102
ENSMUSG00000039068	protein_coding	Zzz3	ENSMUST00000089982	protein_coding	alternative2	3	1	152396684	4197
ENSMUSG00000026832	protein_coding	Cytip	ENSMUST00000146545	processed_transcript		2	-1	58160119	856
ENSMUSG00000039068	protein_coding	Zzz3	ENSMUST00000198468	retained_intron		3	1	152435899	3190
ENSMUSG00000026832	protein_coding	Cytip	ENSMUST00000131443	processed_transcript		2	-1	58156797	641
ENSMUSG00000039068	protein_coding	Zzz3	ENSMUST00000135044	processed_transcript		3	1	152457417	1118
ENSMUSG00000039068	protein_coding	Zzz3	ENSMUST00000106101	protein_coding	principal3	3	1	152396694	7539
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000102855	protein_coding	principal1	2	-1	30415771	4224
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000146603	processed_transcript		2	-1	30406679	3036
ENSMUSG00000081587	processed_pseudogene	Gm14926	ENSMUST00000120650	processed_pseudogene		X	1	119413252	508
ENSMUSG00000058145	protein_coding	Adamts17	ENSMUST00000156396	retained_intron		7	1	66839735	2037
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000028207	protein_coding	principal1	2	-1	30415813	3833
ENSMUSG00000033940	protein_coding	Brk1	ENSMUST00000035725	protein_coding	principal1	6	1	113604772	1095
ENSMUSG00000086431	lincRNA	Gm14929	ENSMUST00000152079	lincRNA		X	-1	119749677	1850
ENSMUSG00000035158	protein_coding	Mitf	ENSMUST00000101123	protein_coding	alternative1	6	1	97929799	2144
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000155790	protein_coding		2	-1	30405288	684
ENSMUSG00000107937	sense_intronic	Gm44200	ENSMUST00000204883	sense_intronic		6	1	113607475	662
ENSMUSG00000035158	protein_coding	Mitf	ENSMUST00000113339	protein_coding		6	1	97940918	2144
ENSMUSG00000058145	protein_coding	Adamts17	ENSMUST00000148538	retained_intron		7	1	66839735	1892
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000102854	protein_coding		2	-1	30415524	2160
ENSMUSG00000107560	antisense	Gm44199	ENSMUST00000205219	antisense		6	-1	113612445	739
ENSMUSG00000035158	protein_coding	Mitf	ENSMUST00000043628	protein_coding		6	1	97991792	1921
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000154595	protein_coding		2	-1	30404961	397
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000132981	protein_coding		2	-1	30415308	840
ENSMUSG00000034732	protein_coding	Pabpc5	ENSMUST00000040961	protein_coding	principal1	X	1	119927196	2434
ENSMUSG00000035158	protein_coding	Mitf	ENSMUST00000139462	nonsense_mediated_decay		6	1	97991819	1649
ENSMUSG00000035158	protein_coding	Mitf	ENSMUST00000203938	protein_coding		6	1	97991921	1074
ENSMUSG00000034732	protein_coding	Pabpc5	ENSMUST00000113366	protein_coding	principal1	X	1	119927225	2243
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000156702	nonsense_mediated_decay		2	-1	30415548	898
ENSMUSG00000031325	transcribed_unitary_pseudogene	4930519F16Rik	ENSMUST00000033688	processed_transcript		X	-1	103256614	1113
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000146822	processed_transcript		2	-1	30414339	274
ENSMUSG00000031325	transcribed_unitary_pseudogene	4930519F16Rik	ENSMUST00000183292	transcribed_unitary_pseudogene		X	-1	103256614	800
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000134120	protein_coding		2	-1	30415518	450
ENSMUSG00000031325	transcribed_unitary_pseudogene	4930519F16Rik	ENSMUST00000127012	processed_transcript		X	-1	103311782	685
ENSMUSG00000033237	protein_coding	Arid2	ENSMUST00000134985	protein_coding		15	1	96287518	809
ENSMUSG00000031325	transcribed_unitary_pseudogene	4930519F16Rik	ENSMUST00000182224	processed_transcript		X	-1	103253047	373
ENSMUSG00000083151	processed_pseudogene	Gm4913	ENSMUST00000117075	processed_pseudogene		X	1	119966284	1290
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000129494	protein_coding		2	-1	30415333	373
ENSMUSG00000084172	processed_pseudogene	Gm16420	ENSMUST00000120258	processed_pseudogene		X	1	120114974	856
ENSMUSG00000015647	protein_coding	Lama5	ENSMUST00000015791	protein_coding	principal1	2	-1	180225859	11388
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000128593	processed_transcript		2	-1	30415600	438
ENSMUSG00000026853	protein_coding	Crat	ENSMUST00000142096	protein_coding		2	-1	30415407	324
ENSMUSG00000058145	protein_coding	Adamts17	ENSMUST00000107478	protein_coding	alternative2	7	1	66839813	6416
ENSMUSG00000082927	processed_pseudogene	Gm5863	ENSMUST00000121760	processed_pseudogene		X	1	120160710	1008
ENSMUSG00000015647	protein_coding	Lama5	ENSMUST00000149812	processed_transcript		2	-1	180177587	478
ENSMUSG00000031325	transcribed_unitary_pseudogene	4930519F16Rik	ENSMUST00000133491	retained_intron		X	-1	103256606	2065
ENSMUSG00000087435	antisense	Gm16323	ENSMUST00000134920	antisense		2	1	30413716	556
ENSMUSG00000058145	protein_coding	Adamts17	ENSMUST00000147880	processed_transcript		7	1	66842255	1878
ENSMUSG00000031325	transcribed_unitary_pseudogene	4930519F16Rik	ENSMUST00000182605	processed_transcript		X	-1	103298310	402
ENSMUSG00000015647	protein_coding	Lama5	ENSMUST00000123906	processed_transcript		2	-1	180178403	451
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000199672	nonsense_mediated_decay		5	1	110135849	1774
ENSMUSG00000031325	transcribed_unitary_pseudogene	4930519F16Rik	ENSMUST00000183315	processed_transcript		X	-1	103288078	463
ENSMUSG00000058145	protein_coding	Adamts17	ENSMUST00000125014	protein_coding		7	1	66849707	259
ENSMUSG00000082718	processed_pseudogene	Gm14928	ENSMUST00000120198	processed_pseudogene		X	1	120178939	477
ENSMUSG00000058145	protein_coding	Adamts17	ENSMUST00000138009	processed_transcript		7	1	66909468	516
ENSMUSG00000058145	protein_coding	Adamts17	ENSMUST00000154103	protein_coding		7	1	67047471	702
ENSMUSG00000058145	protein_coding	Adamts17	ENSMUST00000098382	protein_coding	principal2	7	1	66839735	6025
ENSMUSG00000108833	processed_pseudogene	Gm17909	ENSMUST00000207587	processed_pseudogene		7	1	67082843	907
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000084664	protein_coding		7	-1	116189841	4312
ENSMUSG00000108873	processed_pseudogene	Gm44609	ENSMUST00000207157	processed_pseudogene		7	-1	66994427	460
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000182443	protein_coding		7	-1	116189327	6059
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000181981	protein_coding		7	-1	116198561	4633
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000182511	protein_coding		7	-1	116189604	4502
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000182487	protein_coding	alternative2	7	-1	116308355	3476
ENSMUSG00000033237	protein_coding	Arid2	ENSMUST00000096250	protein_coding	principal1	15	1	96287573	8507
ENSMUSG00000105643	TEC	Gm42611	ENSMUST00000199446	TEC		3	1	157980248	3407
ENSMUSG00000033237	protein_coding	Arid2	ENSMUST00000175735	retained_intron		15	1	96356840	936
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000216517	protein_coding		7	-1	116308333	2601
ENSMUSG00000033237	protein_coding	Arid2	ENSMUST00000176739	retained_intron		15	1	96378814	3404
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000183281	protein_coding		7	-1	116157892	623
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000028209	protein_coding	principal1	2	1	30392254	2251
ENSMUSG00000081546	processed_pseudogene	Gm14927	ENSMUST00000120283	processed_pseudogene		X	1	120371212	454
ENSMUSG00000083321	processed_pseudogene	Gm14931	ENSMUST00000111079	processed_pseudogene		X	-1	120345614	253
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000183308	retained_intron		7	-1	116237666	3354
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000206097	retained_intron		7	-1	116164086	936
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000182549	processed_transcript		7	-1	116184515	630
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000206662	nonsense_mediated_decay		7	-1	116258478	768
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000123202	protein_coding		2	1	30392416	2294
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000182693	processed_transcript		7	-1	116187000	462
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000113612	protein_coding		2	1	30392416	1958
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000183057	protein_coding		7	-1	116308241	685
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000182890	retained_intron		7	-1	116308050	482
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000182312	retained_intron		7	-1	116180676	292
ENSMUSG00000045659	protein_coding	Plekha7	ENSMUST00000205446	processed_transcript		7	-1	116264428	363
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000156059	retained_intron		2	1	30392428	767
ENSMUSG00000049214	protein_coding	Skint7	ENSMUST00000055014	protein_coding	principal3	4	1	111972927	1788
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000156704	retained_intron		2	1	30392430	336
ENSMUSG00000028977	protein_coding	Casz1	ENSMUST00000094464	protein_coding		4	1	148804429	4349
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000137248	nonsense_mediated_decay		2	1	30392439	1851
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000156984	retained_intron		2	1	30392440	354
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000155196	nonsense_mediated_decay		2	1	30392445	902
ENSMUSG00000049214	protein_coding	Skint7	ENSMUST00000106568	protein_coding	alternative2	4	1	111972923	1297
ENSMUSG00000032344	protein_coding	Cgas	ENSMUST00000070742	protein_coding	principal1	9	-1	78443204	4049
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000133991	retained_intron		2	1	30392454	919
ENSMUSG00000049214	protein_coding	Skint7	ENSMUST00000142162	retained_intron		4	1	111983950	1802
ENSMUSG00000032344	protein_coding	Cgas	ENSMUST00000034898	protein_coding		9	-1	78443237	3231
ENSMUSG00000024131	protein_coding	Slc3a1	ENSMUST00000024944	protein_coding	principal1	17	1	85028376	2271
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000151018	processed_transcript		2	1	30395598	537
ENSMUSG00000001510	protein_coding	Dlx3	ENSMUST00000092768	protein_coding	principal1	11	1	95120119	2607
ENSMUSG00000049214	protein_coding	Skint7	ENSMUST00000163281	protein_coding	alternative2	4	1	111972927	1423
ENSMUSG00000032344	protein_coding	Cgas	ENSMUST00000127190	nonsense_mediated_decay		9	-1	78442885	2511
ENSMUSG00000026856	protein_coding	Dolpp1	ENSMUST00000152303	processed_transcript		2	1	30397421	984
ENSMUSG00000087052	transcribed_processed_pseudogene	Gm8093	ENSMUST00000128935	transcribed_processed_pseudogene		9	1	78427507	1892
ENSMUSG00000112805	lincRNA	Gm34574	ENSMUST00000219984	lincRNA		10	-1	99228906	916
ENSMUSG00000087052	transcribed_processed_pseudogene	Gm8093	ENSMUST00000129983	processed_transcript		9	1	78427894	287
ENSMUSG00000112805	lincRNA	Gm34574	ENSMUST00000217795	lincRNA		10	-1	99223066	1240
ENSMUSG00000112805	lincRNA	Gm34574	ENSMUST00000219433	lincRNA		10	-1	99228792	1108
ENSMUSG00000073779	antisense	Lrp8os2	ENSMUST00000188737	antisense		4	-1	107823022	3078
ENSMUSG00000087052	transcribed_processed_pseudogene	Gm8093	ENSMUST00000144982	processed_transcript		9	1	78428445	1020
ENSMUSG00000073779	antisense	Lrp8os2	ENSMUST00000138289	antisense		4	-1	107822974	891
ENSMUSG00000074802	protein_coding	Gas2l3	ENSMUST00000105298	protein_coding	principal2	10	-1	89443967	6305
ENSMUSG00000073779	antisense	Lrp8os2	ENSMUST00000150323	antisense		4	-1	107823010	357
ENSMUSG00000105020	unprocessed_pseudogene	Gm7205	ENSMUST00000196032	unprocessed_pseudogene		5	1	50217247	1323
ENSMUSG00000034755	protein_coding	Pcdh11x	ENSMUST00000113364	protein_coding	principal5	X	1	120290259	4454
ENSMUSG00000073779	antisense	Lrp8os2	ENSMUST00000097930	antisense		4	-1	107810948	2991
ENSMUSG00000028977	protein_coding	Casz1	ENSMUST00000122222	protein_coding	principal1	4	1	148804429	7926
ENSMUSG00000074802	protein_coding	Gas2l3	ENSMUST00000220128	protein_coding	alternative2	10	-1	89443954	2111
ENSMUSG00000034755	protein_coding	Pcdh11x	ENSMUST00000192977	retained_intron		X	1	120290327	2145
ENSMUSG00000074802	protein_coding	Gas2l3	ENSMUST00000220234	protein_coding		10	-1	89433842	653
ENSMUSG00000028977	protein_coding	Casz1	ENSMUST00000128881	processed_transcript		4	1	148804465	1531
ENSMUSG00000034755	protein_coding	Pcdh11x	ENSMUST00000113358	protein_coding		X	1	120290327	8607
ENSMUSG00000028977	protein_coding	Casz1	ENSMUST00000140617	processed_transcript		4	1	148889381	1140
ENSMUSG00000028977	protein_coding	Casz1	ENSMUST00000147270	protein_coding		4	1	148901149	829
ENSMUSG00000028977	protein_coding	Casz1	ENSMUST00000139806	protein_coding		4	1	148933114	3014
ENSMUSG00000034755	protein_coding	Pcdh11x	ENSMUST00000195088	nonsense_mediated_decay		X	1	120290403	4402
ENSMUSG00000034755	protein_coding	Pcdh11x	ENSMUST00000192677	protein_coding	principal5	X	1	120364013	9097
ENSMUSG00000028977	protein_coding	Casz1	ENSMUST00000239035	protein_coding		4	1	148947002	1881
ENSMUSG00000074802	protein_coding	Gas2l3	ENSMUST00000219351	protein_coding		10	-1	89443894	321
ENSMUSG00000074802	protein_coding	Gas2l3	ENSMUST00000218764	protein_coding		10	-1	89434686	380
ENSMUSG00000034755	protein_coding	Pcdh11x	ENSMUST00000193899	protein_coding	alternative2	X	1	120364786	5394
ENSMUSG00000074802	protein_coding	Gas2l3	ENSMUST00000220071	protein_coding		10	-1	89434778	477
ENSMUSG00000034755	protein_coding	Pcdh11x	ENSMUST00000155223	nonsense_mediated_decay		X	1	120401364	1635
ENSMUSG00000074802	protein_coding	Gas2l3	ENSMUST00000219073	processed_transcript		10	-1	89443904	244
ENSMUSG00000034755	protein_coding	Pcdh11x	ENSMUST00000191653	protein_coding		X	1	120401364	1491
ENSMUSG00000074802	protein_coding	Gas2l3	ENSMUST00000099374	protein_coding	principal2	10	-1	89443967	6748
ENSMUSG00000034755	protein_coding	Pcdh11x	ENSMUST00000050239	protein_coding		X	1	120290259	4442
ENSMUSG00000081728	processed_pseudogene	Gm14930	ENSMUST00000118864	processed_pseudogene		X	-1	120442686	652
ENSMUSG00000083616	protein_coding	H2ab3	ENSMUST00000122050	protein_coding	principal1	X	-1	120313095	348
ENSMUSG00000032342	protein_coding	Mto1	ENSMUST00000034896	protein_coding	principal1	9	1	78448208	2366
ENSMUSG00000003273	protein_coding	Car11	ENSMUST00000003360	protein_coding	principal1	7	1	45699843	1585
ENSMUSG00000031661	protein_coding	Nkd1	ENSMUST00000034086	protein_coding	principal1	8	1	88521354	3035
ENSMUSG00000032342	protein_coding	Mto1	ENSMUST00000148238	nonsense_mediated_decay		9	1	78448208	2076
ENSMUSG00000021810	protein_coding	Ecd	ENSMUST00000022344	protein_coding	principal1	14	-1	20348121	3132
ENSMUSG00000032342	protein_coding	Mto1	ENSMUST00000150850	retained_intron		9	1	78448213	1352
ENSMUSG00000021810	protein_coding	Ecd	ENSMUST00000225487	retained_intron		14	-1	20348050	3704
ENSMUSG00000021810	protein_coding	Ecd	ENSMUST00000223955	nonsense_mediated_decay		14	-1	20348070	821
ENSMUSG00000032342	protein_coding	Mto1	ENSMUST00000157051	retained_intron		9	1	78464699	415
ENSMUSG00000003273	protein_coding	Car11	ENSMUST00000210872	retained_intron		7	1	45701016	858
ENSMUSG00000021810	protein_coding	Ecd	ENSMUST00000224412	protein_coding		14	-1	20348066	389
ENSMUSG00000032342	protein_coding	Mto1	ENSMUST00000133002	protein_coding		9	1	78464992	840
ENSMUSG00000003273	protein_coding	Car11	ENSMUST00000211259	retained_intron		7	1	45701035	706
ENSMUSG00000032342	protein_coding	Mto1	ENSMUST00000136478	retained_intron		9	1	78470393	443
ENSMUSG00000003273	protein_coding	Car11	ENSMUST00000209796	nonsense_mediated_decay		7	1	45701243	599
ENSMUSG00000090317	antisense	Gm17324	ENSMUST00000165499	antisense		9	-1	78448786	922
ENSMUSG00000112902	lincRNA	Gm48884	ENSMUST00000220253	lincRNA		10	-1	99237616	468
ENSMUSG00000003273	protein_coding	Car11	ENSMUST00000210027	nonsense_mediated_decay		7	1	45703483	252
ENSMUSG00000111923	lincRNA	Gm34777	ENSMUST00000219688	lincRNA		10	1	99233117	2505
ENSMUSG00000031661	protein_coding	Nkd1	ENSMUST00000169179	protein_coding		8	1	88527653	4081
ENSMUSG00000027720	protein_coding	Il2	ENSMUST00000029275	protein_coding	principal1	3	-1	37125959	1144
ENSMUSG00000031661	protein_coding	Nkd1	ENSMUST00000211113	protein_coding		8	1	88582805	1474
ENSMUSG00000083857	processed_pseudogene	Gm12584	ENSMUST00000117109	processed_pseudogene		3	1	37116734	1105
ENSMUSG00000110187	TEC	Gm45496	ENSMUST00000209918	TEC		8	1	88560033	2917
ENSMUSG00000039988	protein_coding	Ankrd13c	ENSMUST00000199727	nonsense_mediated_decay		3	1	157947239	3426
ENSMUSG00000112721	lincRNA	Gm35608	ENSMUST00000218472	lincRNA		10	1	76684432	2370
ENSMUSG00000033933	protein_coding	Vhl	ENSMUST00000035673	protein_coding	principal1	6	1	113623959	2792
ENSMUSG00000049922	protein_coding	Slc35c1	ENSMUST00000067631	protein_coding	principal4	2	-1	92459794	3139
ENSMUSG00000033933	protein_coding	Vhl	ENSMUST00000128770	processed_transcript		6	1	113624721	582
ENSMUSG00000033933	protein_coding	Vhl	ENSMUST00000131819	processed_transcript		6	1	113624929	419
ENSMUSG00000033933	protein_coding	Vhl	ENSMUST00000204915	nonsense_mediated_decay		6	1	113629507	294
ENSMUSG00000025921	protein_coding	Rdh10	ENSMUST00000027053	protein_coding	principal1	1	1	16105774	3587
ENSMUSG00000033228	protein_coding	Scaf11	ENSMUST00000228072	protein_coding		15	-1	96418692	4519
ENSMUSG00000097671	lincRNA	1700015O11Rik	ENSMUST00000180964	lincRNA		6	-1	113633144	678
ENSMUSG00000025921	protein_coding	Rdh10	ENSMUST00000152626	retained_intron		1	1	16130502	1959
ENSMUSG00000104165	TEC	Gm38249	ENSMUST00000192560	TEC		1	-1	16210517	2321
ENSMUSG00000049922	protein_coding	Slc35c1	ENSMUST00000125276	protein_coding	alternative1	2	-1	92460538	2668
ENSMUSG00000028496	protein_coding	Mllt3	ENSMUST00000078090	protein_coding	principal1	4	-1	88033364	6069
ENSMUSG00000027719	protein_coding	Adad1	ENSMUST00000144629	protein_coding	principal2	3	1	37063527	3101
ENSMUSG00000027719	protein_coding	Adad1	ENSMUST00000029274	protein_coding	alternative2	3	1	37063631	1838
ENSMUSG00000031662	protein_coding	Snx20	ENSMUST00000034087	protein_coding	principal1	8	-1	88636128	1699
ENSMUSG00000049922	protein_coding	Slc35c1	ENSMUST00000136718	protein_coding		2	-1	92459709	606
ENSMUSG00000027719	protein_coding	Adad1	ENSMUST00000141736	retained_intron		3	1	37063678	714
ENSMUSG00000031662	protein_coding	Snx20	ENSMUST00000209806	retained_intron		8	-1	88636101	4995
ENSMUSG00000027719	protein_coding	Adad1	ENSMUST00000148157	retained_intron		3	1	37084953	475
ENSMUSG00000027719	protein_coding	Adad1	ENSMUST00000147773	protein_coding		3	1	37085090	668
ENSMUSG00000081705	processed_pseudogene	Gm12582	ENSMUST00000030555	processed_pseudogene		3	1	37077655	697
ENSMUSG00000082878	processed_pseudogene	Gm12583	ENSMUST00000120677	processed_pseudogene		3	1	37108174	853
ENSMUSG00000028496	protein_coding	Mllt3	ENSMUST00000126353	protein_coding		4	-1	87806314	1956
ENSMUSG00000033228	protein_coding	Scaf11	ENSMUST00000047835	protein_coding	principal1	15	-1	96460843	5766
ENSMUSG00000039988	protein_coding	Ankrd13c	ENSMUST00000040787	protein_coding	principal1	3	1	157947414	3903
ENSMUSG00000033228	protein_coding	Scaf11	ENSMUST00000227069	nonsense_mediated_decay		15	-1	96460824	4829
ENSMUSG00000026126	protein_coding	Ptpn18	ENSMUST00000185610	retained_intron		1	1	34459762	1295
ENSMUSG00000066031	protein_coding	Gm13023	ENSMUST00000085144	protein_coding	principal3	4	1	143789352	1810
ENSMUSG00000039988	protein_coding	Ankrd13c	ENSMUST00000197872	retained_intron		3	1	157947466	4836
ENSMUSG00000033228	protein_coding	Scaf11	ENSMUST00000228535	protein_coding		15	-1	96444055	696
ENSMUSG00000039988	protein_coding	Ankrd13c	ENSMUST00000200516	retained_intron		3	1	157988521	544
ENSMUSG00000028496	protein_coding	Mllt3	ENSMUST00000149357	protein_coding		4	-1	87806323	794
ENSMUSG00000066031	protein_coding	Gm13023	ENSMUST00000139978	processed_transcript		4	1	143789364	776
ENSMUSG00000066031	protein_coding	Gm13023	ENSMUST00000149739	protein_coding		4	1	143789365	670
ENSMUSG00000039988	protein_coding	Ankrd13c	ENSMUST00000198736	retained_intron		3	1	157991723	722
ENSMUSG00000039988	protein_coding	Ankrd13c	ENSMUST00000199008	processed_transcript		3	1	157993635	439
ENSMUSG00000028496	protein_coding	Mllt3	ENSMUST00000148059	protein_coding		4	-1	87806294	422
ENSMUSG00000033228	protein_coding	Scaf11	ENSMUST00000228260	nonsense_mediated_decay		15	-1	96446572	796
ENSMUSG00000066031	protein_coding	Gm13023	ENSMUST00000105770	protein_coding	alternative2	4	1	143789365	833
ENSMUSG00000039988	protein_coding	Ankrd13c	ENSMUST00000196480	retained_intron		3	1	157994213	642
ENSMUSG00000039988	protein_coding	Ankrd13c	ENSMUST00000199757	retained_intron		3	1	157998511	4586
ENSMUSG00000033228	protein_coding	Scaf11	ENSMUST00000227133	processed_transcript		15	-1	96460800	2599
ENSMUSG00000039988	protein_coding	Ankrd13c	ENSMUST00000199574	retained_intron		3	1	157999398	401
ENSMUSG00000028496	protein_coding	Mllt3	ENSMUST00000128930	processed_transcript		4	-1	88033281	1293
ENSMUSG00000039988	protein_coding	Ankrd13c	ENSMUST00000164582	protein_coding	principal1	3	1	157947414	1735
ENSMUSG00000028496	protein_coding	Mllt3	ENSMUST00000134555	processed_transcript		4	-1	87874542	3159
ENSMUSG00000028496	protein_coding	Mllt3	ENSMUST00000141526	retained_intron		4	-1	88032813	4556
ENSMUSG00000028496	protein_coding	Mllt3	ENSMUST00000142454	nonsense_mediated_decay		4	-1	88032813	966
ENSMUSG00000079445	protein_coding	B3gnt7	ENSMUST00000189618	retained_intron		1	1	86302832	1876
ENSMUSG00000113278	lincRNA	Gm33016	ENSMUST00000221224	lincRNA		12	1	71337628	677
ENSMUSG00000079445	protein_coding	B3gnt7	ENSMUST00000113306	protein_coding	principal1	1	1	86303234	2582
ENSMUSG00000079445	protein_coding	B3gnt7	ENSMUST00000188695	protein_coding		1	1	86303531	1523
ENSMUSG00000060771	protein_coding	Tsga10	ENSMUST00000041815	protein_coding	principal3	1	-1	37865079	3400
ENSMUSG00000099644	antisense	Gm28626	ENSMUST00000187004	antisense		1	-1	86304059	520
ENSMUSG00000113441	lincRNA	Gm40438	ENSMUST00000221650	lincRNA		12	1	71355441	1061
ENSMUSG00000113630	lincRNA	4930404H11Rik	ENSMUST00000222756	lincRNA		12	1	71488285	1271
ENSMUSG00000113630	lincRNA	4930404H11Rik	ENSMUST00000220948	lincRNA		12	1	71540607	767
ENSMUSG00000060771	protein_coding	Tsga10	ENSMUST00000114902	protein_coding	alternative2	1	-1	37855374	2724
ENSMUSG00000100668	lincRNA	1700083H02Rik	ENSMUST00000190526	lincRNA		12	-1	71384208	637
ENSMUSG00000060771	protein_coding	Tsga10	ENSMUST00000239367	protein_coding	alternative2	1	-1	37864836	2507
ENSMUSG00000060771	protein_coding	Tsga10	ENSMUST00000088072	protein_coding	alternative2	1	-1	37866429	3837
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000044443	protein_coding		3	-1	126998462	5775
ENSMUSG00000105423	processed_transcript	Gm36814	ENSMUST00000197457	lincRNA		5	-1	50544491	1755
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182588	retained_intron		3	-1	126923972	2359
ENSMUSG00000105423	processed_transcript	Gm36814	ENSMUST00000199991	retained_intron		5	-1	50543535	1075
ENSMUSG00000060771	protein_coding	Tsga10	ENSMUST00000151735	nonsense_mediated_decay		1	-1	37855347	2008
ENSMUSG00000019960	protein_coding	Dusp6	ENSMUST00000020118	protein_coding	principal1	10	1	99263231	2796
ENSMUSG00000105320	lincRNA	Gm43016	ENSMUST00000196628	lincRNA		5	1	50543642	3150
ENSMUSG00000060771	protein_coding	Tsga10	ENSMUST00000123082	protein_coding	alternative2	1	-1	37864836	3953
ENSMUSG00000019960	protein_coding	Dusp6	ENSMUST00000220291	protein_coding		10	1	99263231	2359
ENSMUSG00000060771	protein_coding	Tsga10	ENSMUST00000155852	protein_coding	alternative2	1	-1	37865073	2861
ENSMUSG00000106038	transcribed_processed_pseudogene	Gm4962	ENSMUST00000199640	transcribed_processed_pseudogene		5	1	50679716	2977
ENSMUSG00000019960	protein_coding	Dusp6	ENSMUST00000219988	processed_transcript		10	1	99264277	758
ENSMUSG00000060771	protein_coding	Tsga10	ENSMUST00000193669	protein_coding	alternative2	1	-1	37865073	1981
ENSMUSG00000106345	processed_pseudogene	Gm42459	ENSMUST00000199679	processed_pseudogene		5	1	50517473	742
ENSMUSG00000019960	protein_coding	Dusp6	ENSMUST00000220218	processed_transcript		10	1	99265641	876
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000233057	protein_coding	principal2	17	-1	71310990	3939
ENSMUSG00000060771	protein_coding	Tsga10	ENSMUST00000134024	retained_intron		1	-1	37843721	3133
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000024849	protein_coding	alternative2	17	-1	71310961	3906
ENSMUSG00000097569	lincRNA	Gm26640	ENSMUST00000180809	lincRNA		6	1	72953236	3524
ENSMUSG00000097268	antisense	Gm26805	ENSMUST00000181885	antisense		1	1	37865299	3089
ENSMUSG00000085293	lincRNA	Gm13817	ENSMUST00000142249	lincRNA		2	-1	92540980	604
ENSMUSG00000084809	antisense	Gm12631	ENSMUST00000130576	antisense		4	1	88033501	637
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000232777	protein_coding	alternative2	17	-1	71310959	3873
ENSMUSG00000085261	lincRNA	Gm13814	ENSMUST00000141341	lincRNA		2	1	92483926	3077
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000233245	protein_coding		17	-1	71311556	3883
ENSMUSG00000081530	processed_pseudogene	Gm12646	ENSMUST00000119144	processed_pseudogene		4	1	88043804	238
ENSMUSG00000026126	protein_coding	Ptpn18	ENSMUST00000027302	protein_coding	principal1	1	1	34459765	1559
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000233083	retained_intron		17	-1	71255406	479
ENSMUSG00000026126	protein_coding	Ptpn18	ENSMUST00000190122	protein_coding		1	1	34459777	915
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000233148	protein_coding		17	-1	71268597	758
ENSMUSG00000028126	protein_coding	Pip5k1a	ENSMUST00000107236	protein_coding	principal3	3	-1	95106875	3618
ENSMUSG00000026126	protein_coding	Ptpn18	ENSMUST00000188884	retained_intron		1	1	34459792	987
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000233677	retained_intron		17	-1	71256346	363
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000233698	processed_transcript		17	-1	71265029	399
ENSMUSG00000026126	protein_coding	Ptpn18	ENSMUST00000186252	retained_intron		1	1	34463271	3495
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000233343	protein_coding		17	-1	71297247	404
ENSMUSG00000026126	protein_coding	Ptpn18	ENSMUST00000188972	protein_coding		1	1	34472720	414
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000233728	protein_coding		17	-1	71310281	405
ENSMUSG00000026126	protein_coding	Ptpn18	ENSMUST00000188019	processed_transcript		1	1	34474499	284
ENSMUSG00000020871	protein_coding	Dlx4	ENSMUST00000021241	protein_coding	principal1	11	-1	95146263	2282
ENSMUSG00000100280	processed_transcript	Gm28417	ENSMUST00000191357	retained_intron		1	-1	34470434	1601
ENSMUSG00000024053	protein_coding	Emilin2	ENSMUST00000233659	processed_transcript		17	-1	71311978	368
ENSMUSG00000020871	protein_coding	Dlx4	ENSMUST00000146838	processed_transcript		11	-1	95145801	1593
ENSMUSG00000100280	processed_transcript	Gm28417	ENSMUST00000185218	antisense		1	-1	34473148	785
ENSMUSG00000028126	protein_coding	Pip5k1a	ENSMUST00000107233	protein_coding	alternative2	3	-1	95106930	3663
ENSMUSG00000100280	processed_transcript	Gm28417	ENSMUST00000185881	antisense		1	-1	34473112	538
ENSMUSG00000086552	antisense	Dlx4os	ENSMUST00000156477	antisense		11	1	95145052	1664
ENSMUSG00000037742	protein_coding	Eef1a1	ENSMUST00000042235	protein_coding	principal1	9	-1	78481724	1794
ENSMUSG00000048108	protein_coding	Tmem72	ENSMUST00000056623	protein_coding	principal1	6	-1	116716913	17152
ENSMUSG00000079523	protein_coding	Tmsb10	ENSMUST00000114050	protein_coding	principal1	6	-1	72958488	570
ENSMUSG00000028126	protein_coding	Pip5k1a	ENSMUST00000107232	protein_coding	alternative2	3	-1	95106856	3437
ENSMUSG00000037742	protein_coding	Eef1a1	ENSMUST00000129380	retained_intron		9	-1	78479716	845
ENSMUSG00000048108	protein_coding	Tmem72	ENSMUST00000129255	nonsense_mediated_decay		6	-1	116716729	782
ENSMUSG00000037742	protein_coding	Eef1a1	ENSMUST00000143570	processed_transcript		9	-1	78479501	505
ENSMUSG00000112544	lincRNA	Gm48089	ENSMUST00000217893	lincRNA		10	1	99267896	581
ENSMUSG00000079523	protein_coding	Tmsb10	ENSMUST00000114049	protein_coding	principal1	6	-1	72958302	690
ENSMUSG00000112544	lincRNA	Gm48089	ENSMUST00000219440	lincRNA		10	1	99274705	368
ENSMUSG00000112544	lincRNA	Gm48089	ENSMUST00000218105	lincRNA		10	1	99274796	607
ENSMUSG00000109273	processed_pseudogene	Gm45101	ENSMUST00000208327	processed_pseudogene		7	1	67180100	232
ENSMUSG00000037742	protein_coding	Eef1a1	ENSMUST00000144523	retained_intron		9	-1	78480688	1152
ENSMUSG00000112384	lincRNA	Gm34921	ENSMUST00000219528	lincRNA		10	-1	99270446	1406
ENSMUSG00000037742	protein_coding	Eef1a1	ENSMUST00000150960	retained_intron		9	-1	78480499	854
ENSMUSG00000079523	protein_coding	Tmsb10	ENSMUST00000114048	protein_coding	principal1	6	-1	72958748	623
ENSMUSG00000080860	processed_pseudogene	Gm13815	ENSMUST00000119963	processed_pseudogene		2	1	92561269	412
ENSMUSG00000037742	protein_coding	Eef1a1	ENSMUST00000154207	protein_coding		9	-1	78489151	859
ENSMUSG00000037742	protein_coding	Eef1a1	ENSMUST00000126614	retained_intron		9	-1	78480688	842
ENSMUSG00000079523	protein_coding	Tmsb10	ENSMUST00000144337	protein_coding		6	-1	72958399	433
ENSMUSG00000037742	protein_coding	Eef1a1	ENSMUST00000156988	protein_coding		9	-1	78480841	745
ENSMUSG00000028126	protein_coding	Pip5k1a	ENSMUST00000005768	protein_coding	alternative2	3	-1	95106779	3480
ENSMUSG00000024127	protein_coding	Prepl	ENSMUST00000072406	protein_coding	principal1	17	-1	85090221	3255
ENSMUSG00000028126	protein_coding	Pip5k1a	ENSMUST00000107231	processed_transcript		3	-1	95078516	632
ENSMUSG00000114028	lincRNA	9630002D21Rik	ENSMUST00000221128	lincRNA		12	1	71577748	1351
ENSMUSG00000111417	lincRNA	Gm47430	ENSMUST00000214586	lincRNA		9	1	78520546	961
ENSMUSG00000028126	protein_coding	Pip5k1a	ENSMUST00000151335	retained_intron		3	-1	95083232	520
ENSMUSG00000114028	lincRNA	9630002D21Rik	ENSMUST00000222033	lincRNA		12	1	71577965	2345
ENSMUSG00000116253	lincRNA	Gm41392	ENSMUST00000229198	lincRNA		15	1	96494577	282
ENSMUSG00000028126	protein_coding	Pip5k1a	ENSMUST00000107229	processed_transcript		3	-1	95106823	724
ENSMUSG00000024127	protein_coding	Prepl	ENSMUST00000234994	processed_transcript		17	-1	85077474	2196
ENSMUSG00000105931	TEC	Gm43014	ENSMUST00000198568	TEC		5	1	50838317	2443
ENSMUSG00000116160	lincRNA	Gm41392	ENSMUST00000229356	lincRNA		15	1	96497902	632
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000112519	protein_coding	alternative2	5	1	110135849	3159
ENSMUSG00000114063	processed_pseudogene	Gm47555	ENSMUST00000221874	processed_pseudogene		12	-1	71754385	336
ENSMUSG00000105273	processed_pseudogene	Gm43015	ENSMUST00000199087	processed_pseudogene		5	1	50921342	565
ENSMUSG00000106267	processed_pseudogene	Gm40319	ENSMUST00000199785	processed_pseudogene		5	1	51052381	481
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000199557	nonsense_mediated_decay		5	1	110135851	2873
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000198633	protein_coding	alternative2	5	1	110135857	2623
ENSMUSG00000100868	antisense	Gm28095	ENSMUST00000186343	antisense		1	1	16228506	1515
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000197010	retained_intron		5	1	110135860	2135
ENSMUSG00000024127	protein_coding	Prepl	ENSMUST00000171795	protein_coding		17	-1	85090224	2734
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000014812	protein_coding	principal3	5	1	110135860	3146
ENSMUSG00000024127	protein_coding	Prepl	ENSMUST00000234036	retained_intron		17	-1	85090231	1625
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000198066	nonsense_mediated_decay		5	1	110135878	3201
ENSMUSG00000024127	protein_coding	Prepl	ENSMUST00000234676	protein_coding		17	-1	85090241	773
ENSMUSG00000021987	protein_coding	Mtmr6	ENSMUST00000022563	protein_coding	principal2	14	1	60265228	3813
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000199283	nonsense_mediated_decay		5	1	110135907	714
ENSMUSG00000024127	protein_coding	Prepl	ENSMUST00000234393	protein_coding		17	-1	85084008	1164
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000199811	protein_coding		5	1	110135925	480
ENSMUSG00000021987	protein_coding	Mtmr6	ENSMUST00000225574	processed_transcript		14	1	60265273	487
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000197968	retained_intron		5	1	110154834	597
ENSMUSG00000021987	protein_coding	Mtmr6	ENSMUST00000224366	protein_coding	alternative2	14	1	60265338	1968
ENSMUSG00000014668	protein_coding	Chfr	ENSMUST00000197005	retained_intron		5	1	110163806	613
ENSMUSG00000021987	protein_coding	Mtmr6	ENSMUST00000224164	retained_intron		14	1	60296255	2877
ENSMUSG00000105541	antisense	Gm43136	ENSMUST00000200403	antisense		5	-1	110154122	636
ENSMUSG00000086247	processed_transcript	Gm15787	ENSMUST00000152014	antisense		5	-1	110162442	885
ENSMUSG00000086247	processed_transcript	Gm15787	ENSMUST00000135366	processed_transcript		5	-1	110176504	410
ENSMUSG00000086247	processed_transcript	Gm15787	ENSMUST00000130630	antisense		5	-1	110176443	284
ENSMUSG00000086247	processed_transcript	Gm15787	ENSMUST00000130892	antisense		5	-1	110176504	1250
ENSMUSG00000086247	processed_transcript	Gm15787	ENSMUST00000141008	antisense		5	-1	110176466	585
ENSMUSG00000086247	processed_transcript	Gm15787	ENSMUST00000156579	antisense		5	-1	110169896	312
ENSMUSG00000086247	processed_transcript	Gm15787	ENSMUST00000132210	antisense		5	-1	110176504	686
ENSMUSG00000086247	processed_transcript	Gm15787	ENSMUST00000125250	antisense		5	-1	110176440	351
ENSMUSG00000022487	protein_coding	Gtsf1	ENSMUST00000023129	protein_coding	principal1	15	-1	103430470	819
ENSMUSG00000022487	protein_coding	Gtsf1	ENSMUST00000136480	protein_coding	principal1	15	-1	103428500	767
ENSMUSG00000022487	protein_coding	Gtsf1	ENSMUST00000123724	protein_coding		15	-1	103428606	747
ENSMUSG00000022487	protein_coding	Gtsf1	ENSMUST00000146736	protein_coding		15	-1	103429562	698
ENSMUSG00000022487	protein_coding	Gtsf1	ENSMUST00000153930	protein_coding	principal1	15	-1	103430349	799
ENSMUSG00000022487	protein_coding	Gtsf1	ENSMUST00000146675	protein_coding	principal1	15	-1	103430344	756
ENSMUSG00000022487	protein_coding	Gtsf1	ENSMUST00000141364	protein_coding	principal1	15	-1	103430379	700
ENSMUSG00000022487	protein_coding	Gtsf1	ENSMUST00000147389	protein_coding		15	-1	103430409	704
ENSMUSG00000022487	protein_coding	Gtsf1	ENSMUST00000129837	protein_coding		15	-1	103430244	615
ENSMUSG00000082888	processed_pseudogene	Gm12934	ENSMUST00000119221	processed_pseudogene		4	-1	126524672	343
ENSMUSG00000053508	protein_coding	Gtsf2	ENSMUST00000065978	protein_coding	principal1	15	-1	103448459	726
ENSMUSG00000053508	protein_coding	Gtsf2	ENSMUST00000229158	nonsense_mediated_decay		15	-1	103448469	571
ENSMUSG00000114796	antisense	A930028N01Rik	ENSMUST00000225358	antisense		19	1	40297971	422
ENSMUSG00000049624	protein_coding	Slc17a5	ENSMUST00000052441	protein_coding	principal3	9	-1	78588041	3236
ENSMUSG00000027984	protein_coding	Hadh	ENSMUST00000029610	protein_coding	principal1	3	-1	131272101	1789
ENSMUSG00000060657	protein_coding	Marf1	ENSMUST00000090300	protein_coding	principal1	16	-1	14159267	7751
ENSMUSG00000049624	protein_coding	Slc17a5	ENSMUST00000117645	protein_coding	alternative2	9	-1	78588015	3114
ENSMUSG00000027984	protein_coding	Hadh	ENSMUST00000152427	retained_intron		3	-1	131272024	3751
ENSMUSG00000060657	protein_coding	Marf1	ENSMUST00000231032	retained_intron		16	-1	14142540	2222
ENSMUSG00000060657	protein_coding	Marf1	ENSMUST00000229614	protein_coding		16	-1	14163351	2782
ENSMUSG00000049624	protein_coding	Slc17a5	ENSMUST00000119213	processed_transcript		9	-1	78588027	1151
ENSMUSG00000042500	protein_coding	Ago4	ENSMUST00000084289	protein_coding	principal1	4	-1	126533472	6537
ENSMUSG00000042500	protein_coding	Ago4	ENSMUST00000122951	processed_transcript		4	-1	126516912	574
ENSMUSG00000083461	processed_pseudogene	Gm12935	ENSMUST00000119352	processed_pseudogene		4	1	126521669	246
ENSMUSG00000014859	protein_coding	E2f4	ENSMUST00000015003	protein_coding	principal1	8	1	105297663	1993
ENSMUSG00000014859	protein_coding	E2f4	ENSMUST00000212037	processed_transcript		8	1	105297717	358
ENSMUSG00000014859	protein_coding	E2f4	ENSMUST00000212572	retained_intron		8	1	105303925	1151
ENSMUSG00000025340	protein_coding	Rabgef1	ENSMUST00000119797	protein_coding	principal1	5	1	130171798	2690
ENSMUSG00000025340	protein_coding	Rabgef1	ENSMUST00000148264	protein_coding		5	1	130171824	828
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000163339	protein_coding		14	1	73123037	528
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000163650	retained_intron		14	1	73138768	892
ENSMUSG00000025340	protein_coding	Rabgef1	ENSMUST00000119027	protein_coding		5	1	130187161	912
ENSMUSG00000025340	protein_coding	Rabgef1	ENSMUST00000026390	protein_coding	principal1	5	1	130187161	2828
ENSMUSG00000022488	protein_coding	Nckap1l	ENSMUST00000229468	retained_intron		15	1	103453794	4992
ENSMUSG00000017417	protein_coding	Plxdc1	ENSMUST00000017561	protein_coding	principal1	11	-1	97986444	2881
ENSMUSG00000025340	protein_coding	Rabgef1	ENSMUST00000202729	processed_transcript		5	1	130187208	628
ENSMUSG00000025340	protein_coding	Rabgef1	ENSMUST00000143727	retained_intron		5	1	130187220	812
ENSMUSG00000025340	protein_coding	Rabgef1	ENSMUST00000125937	retained_intron		5	1	130207053	739
ENSMUSG00000025340	protein_coding	Rabgef1	ENSMUST00000147493	retained_intron		5	1	130211381	880
ENSMUSG00000025340	protein_coding	Rabgef1	ENSMUST00000143865	nonsense_mediated_decay		5	1	130213166	426
ENSMUSG00000017417	protein_coding	Plxdc1	ENSMUST00000107565	protein_coding		11	-1	97986399	2439
ENSMUSG00000094092	processed_pseudogene	Gm15921	ENSMUST00000119542	processed_pseudogene		5	-1	130208562	483
ENSMUSG00000023169	protein_coding	Slc38a1	ENSMUST00000088454	protein_coding	principal1	15	-1	96642250	6966
ENSMUSG00000080893	processed_pseudogene	Ndufa12-ps	ENSMUST00000118998	processed_pseudogene		5	1	130188395	402
ENSMUSG00000017417	protein_coding	Plxdc1	ENSMUST00000141708	processed_transcript		11	-1	97986433	2685
ENSMUSG00000023169	protein_coding	Slc38a1	ENSMUST00000100262	protein_coding	principal1	15	-1	96641962	3183
ENSMUSG00000017417	protein_coding	Plxdc1	ENSMUST00000107564	protein_coding		11	-1	97986430	619
ENSMUSG00000023169	protein_coding	Slc38a1	ENSMUST00000230607	retained_intron		15	-1	96579584	506
ENSMUSG00000082715	processed_pseudogene	Gm11633	ENSMUST00000118176	processed_pseudogene		11	1	97968792	444
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238584	protein_coding		4	1	107801869	4618
ENSMUSG00000023169	protein_coding	Slc38a1	ENSMUST00000230756	retained_intron		15	-1	96642212	4831
ENSMUSG00000023169	protein_coding	Slc38a1	ENSMUST00000230767	protein_coding		15	-1	96642213	2816
ENSMUSG00000023169	protein_coding	Slc38a1	ENSMUST00000229253	retained_intron		15	-1	96642399	3722
ENSMUSG00000023169	protein_coding	Slc38a1	ENSMUST00000088452	protein_coding	principal1	15	-1	96642913	7266
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000106731	protein_coding		4	1	107802164	7391
ENSMUSG00000059218	protein_coding	Gm13084	ENSMUST00000105769	protein_coding	alternative2	4	-1	143816089	1159
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000143601	nonsense_mediated_decay		4	1	107802261	3291
ENSMUSG00000022488	protein_coding	Nckap1l	ENSMUST00000229127	nonsense_mediated_decay		15	1	103453799	4310
ENSMUSG00000059218	protein_coding	Gm13084	ENSMUST00000075045	protein_coding	principal3	4	-1	143816093	1805
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000106733	protein_coding		4	1	107802277	3333
ENSMUSG00000059218	protein_coding	Gm13084	ENSMUST00000137635	retained_intron		4	-1	143816078	595
ENSMUSG00000026617	protein_coding	Bpnt1	ENSMUST00000027916	protein_coding	principal3	1	1	185332149	2200
ENSMUSG00000026617	protein_coding	Bpnt1	ENSMUST00000210277	protein_coding	alternative1	1	1	185332172	1226
ENSMUSG00000091806	processed_pseudogene	Gm5258	ENSMUST00000165437	processed_pseudogene		1	1	86323267	327
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238405	retained_intron		4	1	107802291	737
ENSMUSG00000026617	protein_coding	Bpnt1	ENSMUST00000151769	protein_coding		1	1	185332173	406
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238651	protein_coding		4	1	107802293	2799
ENSMUSG00000026617	protein_coding	Bpnt1	ENSMUST00000110965	protein_coding		1	1	185332180	1046
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000030356	protein_coding		4	1	107802314	4555
ENSMUSG00000000223	protein_coding	Drp2	ENSMUST00000113228	protein_coding	principal1	X	1	134404551	3141
ENSMUSG00000026617	protein_coding	Bpnt1	ENSMUST00000137757	processed_transcript		1	1	185332207	432
ENSMUSG00000091147	antisense	4921509A06Rik	ENSMUST00000171278	antisense		9	-1	78630128	392
ENSMUSG00000000223	protein_coding	Drp2	ENSMUST00000153424	protein_coding	principal1	X	1	134404628	7135
ENSMUSG00000117137	lincRNA	4930471L23Rik	ENSMUST00000233188	lincRNA		17	1	71315429	571
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000171070	protein_coding		14	1	73138768	741
ENSMUSG00000117199	lincRNA	Gm4566	ENSMUST00000232802	lincRNA		17	-1	71341766	654
ENSMUSG00000117199	lincRNA	Gm4566	ENSMUST00000232737	lincRNA		17	-1	71341804	531
ENSMUSG00000000223	protein_coding	Drp2	ENSMUST00000113224	protein_coding		X	1	134404780	4147
ENSMUSG00000000223	protein_coding	Drp2	ENSMUST00000113226	protein_coding	principal1	X	1	134404802	3499
ENSMUSG00000022488	protein_coding	Nckap1l	ENSMUST00000047405	protein_coding	principal1	15	1	103453827	4725
ENSMUSG00000022488	protein_coding	Nckap1l	ENSMUST00000229835	processed_transcript		15	1	103479135	1848
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182078	protein_coding	principal2	3	-1	127409059	14305
ENSMUSG00000022488	protein_coding	Nckap1l	ENSMUST00000230276	processed_transcript		15	1	103479148	3235
ENSMUSG00000000223	protein_coding	Drp2	ENSMUST00000142146	processed_transcript		X	1	134423776	1423
ENSMUSG00000002748	protein_coding	Baz1b	ENSMUST00000002825	protein_coding	principal1	5	1	135187264	6492
ENSMUSG00000000223	protein_coding	Drp2	ENSMUST00000000228	retained_intron		X	1	134423830	4389
ENSMUSG00000002748	protein_coding	Baz1b	ENSMUST00000201894	retained_intron		5	1	135198132	3018
ENSMUSG00000026383	protein_coding	Epb41l5	ENSMUST00000052404	protein_coding		1	-1	119648936	6442
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182064	protein_coding	alternative2	3	-1	127225847	12413
ENSMUSG00000002748	protein_coding	Baz1b	ENSMUST00000176793	retained_intron		5	1	135205879	4406
ENSMUSG00000002748	protein_coding	Baz1b	ENSMUST00000142307	retained_intron		5	1	135208408	2423
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182571	protein_coding		3	-1	126934700	1548
ENSMUSG00000002748	protein_coding	Baz1b	ENSMUST00000136947	retained_intron		5	1	135242389	528
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182118	protein_coding		3	-1	126929812	367
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238421	protein_coding		4	1	107802413	2364
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182212	retained_intron		3	-1	126928367	2781
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182271	retained_intron		3	-1	126935117	623
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000126573	protein_coding		4	1	107802413	2590
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182062	protein_coding		3	-1	126956074	561
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238569	protein_coding	principal1	4	1	107802413	3497
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182025	nonsense_mediated_decay		3	-1	126955873	448
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000106732	protein_coding		4	1	107802440	2531
ENSMUSG00000026383	protein_coding	Epb41l5	ENSMUST00000163147	protein_coding		1	-1	119648934	3370
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000183075	retained_intron		3	-1	126998438	2630
ENSMUSG00000022678	protein_coding	Nde1	ENSMUST00000023359	protein_coding	principal1	16	1	14163275	2287
ENSMUSG00000022580	protein_coding	Rhpn1	ENSMUST00000121137	protein_coding	alternative2	15	1	75704280	3360
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000147319	processed_transcript		4	1	107802842	797
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182711	protein_coding		3	-1	127499350	4268
ENSMUSG00000026383	protein_coding	Epb41l5	ENSMUST00000191162	retained_intron		1	-1	119600305	825
ENSMUSG00000030180	protein_coding	Kdm5a	ENSMUST00000135802	nonsense_mediated_decay		6	1	120364124	3665
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000146552	processed_transcript		4	1	107802868	2713
ENSMUSG00000026383	protein_coding	Epb41l5	ENSMUST00000187239	retained_intron		1	-1	119580424	2288
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182959	protein_coding		3	-1	127408998	3536
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000123140	processed_transcript		4	1	107823161	3129
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000211813	protein_coding		3	-1	126976154	365
ENSMUSG00000026383	protein_coding	Epb41l5	ENSMUST00000191046	protein_coding	principal1	1	-1	119649000	6870
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000145832	retained_intron		4	1	107830965	2629
ENSMUSG00000022678	protein_coding	Nde1	ENSMUST00000117958	protein_coding		16	1	14163287	1551
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238207	retained_intron		4	1	107830965	1434
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238570	processed_transcript		4	1	107830985	3532
ENSMUSG00000026383	protein_coding	Epb41l5	ENSMUST00000027632	protein_coding	principal1	1	-1	119648617	2523
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000170370	protein_coding		14	1	73142536	637
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000135591	retained_intron		4	1	107846201	557
ENSMUSG00000026383	protein_coding	Epb41l5	ENSMUST00000185467	retained_intron		1	-1	119599240	854
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000135022	protein_coding		4	1	107846604	471
ENSMUSG00000026383	protein_coding	Epb41l5	ENSMUST00000189042	retained_intron		1	-1	119634000	617
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000183097	retained_intron		3	-1	127024248	2668
ENSMUSG00000026383	protein_coding	Epb41l5	ENSMUST00000187194	protein_coding		1	-1	119648624	615
ENSMUSG00000022678	protein_coding	Nde1	ENSMUST00000132316	nonsense_mediated_decay		16	1	14163298	2105
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238304	retained_intron		4	1	107847444	822
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238658	nonsense_mediated_decay		4	1	107854307	1074
ENSMUSG00000039001	protein_coding	Rps21	ENSMUST00000059080	protein_coding	principal1	2	1	180257377	394
ENSMUSG00000022678	protein_coding	Nde1	ENSMUST00000133249	retained_intron		16	1	14163304	681
ENSMUSG00000102687	TEC	Gm37219	ENSMUST00000192036	TEC		1	-1	119631669	926
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182008	protein_coding		3	-1	127409031	2474
ENSMUSG00000022678	protein_coding	Nde1	ENSMUST00000115795	protein_coding		16	1	14163345	2335
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238255	protein_coding		4	1	107859975	1105
ENSMUSG00000039001	protein_coding	Rps21	ENSMUST00000148629	retained_intron		2	1	180257379	481
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182547	protein_coding		3	-1	127409031	2428
ENSMUSG00000030180	protein_coding	Kdm5a	ENSMUST00000005108	protein_coding	principal1	6	1	120364124	10944
ENSMUSG00000022678	protein_coding	Nde1	ENSMUST00000127801	processed_transcript		16	1	14163349	590
ENSMUSG00000039001	protein_coding	Rps21	ENSMUST00000125301	retained_intron		2	1	180257418	404
ENSMUSG00000028613	protein_coding	Lrp8	ENSMUST00000238693	protein_coding		4	1	107861306	764
ENSMUSG00000022678	protein_coding	Nde1	ENSMUST00000156041	retained_intron		16	1	14175127	715
ENSMUSG00000039001	protein_coding	Rps21	ENSMUST00000145043	retained_intron		2	1	180257418	419
ENSMUSG00000022678	protein_coding	Nde1	ENSMUST00000149232	protein_coding		16	1	14183573	746
ENSMUSG00000109816	lincRNA	4930483O08Rik	ENSMUST00000209850	lincRNA		7	1	133128251	1030
ENSMUSG00000030180	protein_coding	Kdm5a	ENSMUST00000152293	retained_intron		6	1	120364132	1402
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182994	protein_coding		3	-1	127162346	2715
ENSMUSG00000022580	protein_coding	Rhpn1	ENSMUST00000124749	retained_intron		15	1	75704308	2605
ENSMUSG00000022580	protein_coding	Rhpn1	ENSMUST00000143056	retained_intron		15	1	75704318	2146
ENSMUSG00000028612	antisense	Lrp8os1	ENSMUST00000142425	antisense		4	-1	107830844	695
ENSMUSG00000030180	protein_coding	Kdm5a	ENSMUST00000132009	nonsense_mediated_decay		6	1	120364458	3329
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182610	protein_coding		3	-1	127408967	2231
ENSMUSG00000022580	protein_coding	Rhpn1	ENSMUST00000149407	nonsense_mediated_decay		15	1	75704329	2283
ENSMUSG00000030180	protein_coding	Kdm5a	ENSMUST00000203373	protein_coding		6	1	120374817	460
ENSMUSG00000028612	antisense	Lrp8os1	ENSMUST00000030352	antisense		4	-1	107830844	672
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182452	protein_coding		3	-1	127225933	458
ENSMUSG00000034432	protein_coding	Cops8	ENSMUST00000036153	protein_coding	principal1	1	1	90602981	2287
ENSMUSG00000030180	protein_coding	Kdm5a	ENSMUST00000124847	retained_intron		6	1	120405803	2716
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182050	retained_intron		3	-1	127162238	2540
ENSMUSG00000087200	bidirectional_promoter_lncRNA	Lrp8os3	ENSMUST00000125464	bidirectional_promoter_lncRNA		4	-1	107802064	1770
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000238781	protein_coding		3	-1	127124862	557
ENSMUSG00000030180	protein_coding	Kdm5a	ENSMUST00000124525	retained_intron		6	1	120427239	999
ENSMUSG00000030180	protein_coding	Kdm5a	ENSMUST00000132599	retained_intron		6	1	120429823	689
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000183095	protein_coding		3	-1	127408954	420
ENSMUSG00000030180	protein_coding	Kdm5a	ENSMUST00000142791	processed_transcript		6	1	120430204	1295
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000239234	protein_coding		3	-1	127165239	159
ENSMUSG00000022580	protein_coding	Rhpn1	ENSMUST00000023244	protein_coding	principal3	15	1	75704394	1932
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182876	retained_intron		3	-1	127162204	2491
ENSMUSG00000046523	protein_coding	Kctd4	ENSMUST00000050120	protein_coding	principal1	14	1	75955009	3998
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000183234	retained_intron		3	-1	127408995	4550
ENSMUSG00000034432	protein_coding	Cops8	ENSMUST00000191510	retained_intron		1	1	90603476	2593
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000182316	retained_intron		3	-1	127499002	3134
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000104965	retained_intron		3	-1	127499260	3154
ENSMUSG00000032826	protein_coding	Ank2	ENSMUST00000189368	protein_coding		3	-1	127499001	339
ENSMUSG00000022580	protein_coding	Rhpn1	ENSMUST00000229843	processed_transcript		15	1	75710739	665
ENSMUSG00000022580	protein_coding	Rhpn1	ENSMUST00000229182	retained_intron		15	1	75711606	827
ENSMUSG00000105469	TEC	A930036I15Rik	ENSMUST00000196018	TEC		3	-1	126967519	1045
ENSMUSG00000022580	protein_coding	Rhpn1	ENSMUST00000229670	retained_intron		15	1	75712588	663
ENSMUSG00000105822	TEC	Gm42969	ENSMUST00000199858	TEC		3	-1	127393706	3631
ENSMUSG00000105733	TEC	Gm42973	ENSMUST00000197913	TEC		3	-1	127243775	3200
ENSMUSG00000046186	protein_coding	Cd109	ENSMUST00000093812	protein_coding	principal1	9	1	78615546	5860
ENSMUSG00000034432	protein_coding	Cops8	ENSMUST00000189309	retained_intron		1	1	90603478	1003
ENSMUSG00000106612	TEC	Gm43750	ENSMUST00000199027	TEC		3	-1	127010801	2493
ENSMUSG00000067995	protein_coding	Gtf2f2	ENSMUST00000088922	protein_coding	principal1	14	-1	76010865	1467
ENSMUSG00000034432	protein_coding	Cops8	ENSMUST00000190057	retained_intron		1	1	90603499	395
ENSMUSG00000046186	protein_coding	Cd109	ENSMUST00000163608	retained_intron		9	1	78615763	1403
ENSMUSG00000105202	TEC	C230031I18Rik	ENSMUST00000197856	TEC		3	-1	127183973	3698
ENSMUSG00000034432	protein_coding	Cops8	ENSMUST00000186152	processed_transcript		1	1	90603499	420
ENSMUSG00000106369	transcribed_unprocessed_pseudogene	Gm43355	ENSMUST00000196541	transcribed_unprocessed_pseudogene		3	-1	127481427	346
ENSMUSG00000034432	protein_coding	Cops8	ENSMUST00000186750	protein_coding		1	1	90603528	508
ENSMUSG00000105445	TEC	Gm42972	ENSMUST00000196937	TEC		3	-1	127272289	5617
ENSMUSG00000058013	protein_coding	Septin11	ENSMUST00000074733	protein_coding	principal3	5	1	93093437	5028
ENSMUSG00000034432	protein_coding	Cops8	ENSMUST00000190700	retained_intron		1	1	90609654	901
ENSMUSG00000006678	protein_coding	Pola1	ENSMUST00000006856	protein_coding	principal1	X	-1	93632155	5346
ENSMUSG00000058013	protein_coding	Septin11	ENSMUST00000201377	retained_intron		5	1	93093438	640
ENSMUSG00000034432	protein_coding	Cops8	ENSMUST00000189107	retained_intron		1	1	90611346	462
ENSMUSG00000117003	bidirectional_promoter_lncRNA	Gm49937	ENSMUST00000233518	bidirectional_promoter_lncRNA		17	1	66449854	2746
ENSMUSG00000058013	protein_coding	Septin11	ENSMUST00000201700	protein_coding		5	1	93093438	3478
ENSMUSG00000034432	protein_coding	Cops8	ENSMUST00000186882	protein_coding		1	1	90611580	513
ENSMUSG00000006678	protein_coding	Pola1	ENSMUST00000124236	processed_transcript		X	-1	93632115	690
ENSMUSG00000058013	protein_coding	Septin11	ENSMUST00000202196	protein_coding		5	1	93093448	1066
ENSMUSG00000006678	protein_coding	Pola1	ENSMUST00000127718	retained_intron		X	-1	93632143	3612
ENSMUSG00000058013	protein_coding	Septin11	ENSMUST00000202308	protein_coding	alternative1	5	1	93093451	1792
ENSMUSG00000006678	protein_coding	Pola1	ENSMUST00000142479	processed_transcript		X	-1	93490946	610
ENSMUSG00000058013	protein_coding	Septin11	ENSMUST00000201421	protein_coding		5	1	93093526	2428
ENSMUSG00000083207	processed_pseudogene	Gm14780	ENSMUST00000118387	processed_pseudogene		X	1	93527573	2737
ENSMUSG00000058013	protein_coding	Septin11	ENSMUST00000202415	protein_coding		5	1	93093536	434
ENSMUSG00000058013	protein_coding	Septin11	ENSMUST00000202217	protein_coding	alternative1	5	1	93093571	1380
ENSMUSG00000106268	processed_pseudogene	Gm18492	ENSMUST00000198141	processed_pseudogene		3	-1	131285144	1018
ENSMUSG00000022462	protein_coding	Slc38a2	ENSMUST00000023099	protein_coding	principal1	15	-1	96699730	4660
ENSMUSG00000058013	protein_coding	Septin11	ENSMUST00000201695	retained_intron		5	1	93148503	1119
ENSMUSG00000038990	protein_coding	Cables2	ENSMUST00000108891	protein_coding	principal1	2	-1	180273496	2975
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000032168	protein_coding	principal1	6	-1	88518905	3172
ENSMUSG00000022462	protein_coding	Slc38a2	ENSMUST00000229141	retained_intron		15	-1	96698691	6116
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000162627	protein_coding		1	-1	16519228	2773
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000136103	processed_transcript		6	-1	88506371	720
ENSMUSG00000021986	protein_coding	Amer2	ENSMUST00000225247	protein_coding		14	1	60373259	2662
ENSMUSG00000111139	processed_pseudogene	Gm47497	ENSMUST00000217312	processed_pseudogene		9	-1	78765600	213
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000203200	processed_transcript		6	-1	88512405	803
ENSMUSG00000021986	protein_coding	Amer2	ENSMUST00000224957	protein_coding		14	1	60373287	1444
ENSMUSG00000110809	processed_pseudogene	Gm46138	ENSMUST00000215294	processed_pseudogene		9	-1	78767532	426
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000145421	retained_intron		6	-1	88513901	2523
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000203943	retained_intron		6	-1	88512723	666
ENSMUSG00000030177	protein_coding	Ccdc77	ENSMUST00000032283	protein_coding	principal2	6	-1	120357429	2610
ENSMUSG00000021986	protein_coding	Amer2	ENSMUST00000022561	protein_coding	alternative2	14	1	60377692	10506
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000204502	retained_intron		6	-1	88512795	517
ENSMUSG00000038990	protein_coding	Cables2	ENSMUST00000136706	retained_intron		2	-1	180273463	4561
ENSMUSG00000059422	processed_pseudogene	Gm8116	ENSMUST00000182917	processed_pseudogene		9	-1	78821838	1201
ENSMUSG00000038990	protein_coding	Cables2	ENSMUST00000141067	retained_intron		2	-1	180261765	875
ENSMUSG00000084329	processed_pseudogene	Gm6733	ENSMUST00000118302	processed_pseudogene		11	1	72833461	1920
ENSMUSG00000021986	protein_coding	Amer2	ENSMUST00000239079	protein_coding	principal2	14	1	60378286	2718
ENSMUSG00000038990	protein_coding	Cables2	ENSMUST00000126688	retained_intron		2	-1	180273496	662
ENSMUSG00000102385	TEC	Gm38144	ENSMUST00000192790	TEC		15	1	96700173	465
ENSMUSG00000038990	protein_coding	Cables2	ENSMUST00000135301	retained_intron		2	-1	180273446	813
ENSMUSG00000030177	protein_coding	Ccdc77	ENSMUST00000127146	nonsense_mediated_decay		6	-1	120364374	2458
ENSMUSG00000095638	processed_pseudogene	Gm8888	ENSMUST00000177677	processed_pseudogene		15	-1	96767078	313
ENSMUSG00000030177	protein_coding	Ccdc77	ENSMUST00000112703	protein_coding	alternative2	6	-1	120357472	1887
ENSMUSG00000028975	protein_coding	Pex14	ENSMUST00000103217	protein_coding	principal1	4	-1	149099876	2006
ENSMUSG00000111081	processed_pseudogene	Gm47498	ENSMUST00000216958	processed_pseudogene		9	-1	78936783	225
ENSMUSG00000030177	protein_coding	Ccdc77	ENSMUST00000144131	nonsense_mediated_decay		6	-1	120357410	1095
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000130918	retained_intron		6	-1	88518773	935
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000130807	retained_intron		6	-1	88515980	794
ENSMUSG00000116202	processed_pseudogene	Rpl10a-ps3	ENSMUST00000229718	processed_pseudogene		15	-1	96923405	646
ENSMUSG00000030177	protein_coding	Ccdc77	ENSMUST00000163827	protein_coding		6	-1	120357367	658
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000139676	retained_intron		6	-1	88518828	621
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000139551	processed_transcript		6	-1	88518791	380
ENSMUSG00000028975	protein_coding	Pex14	ENSMUST00000128067	retained_intron		4	-1	149099816	3819
ENSMUSG00000030177	protein_coding	Ccdc77	ENSMUST00000136829	nonsense_mediated_decay		6	-1	120357340	660
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000125016	retained_intron		6	-1	88518903	472
ENSMUSG00000097761	antisense	4930534D22Rik	ENSMUST00000181438	antisense		3	1	131302643	2715
ENSMUSG00000030082	protein_coding	Sec61a1	ENSMUST00000155079	processed_transcript		6	-1	88518793	369
ENSMUSG00000028975	protein_coding	Pex14	ENSMUST00000154860	processed_transcript		4	-1	149099815	989
ENSMUSG00000036565	protein_coding	Ttyh3	ENSMUST00000197452	protein_coding		5	-1	140649025	4576
ENSMUSG00000111309	processed_pseudogene	Gm18863	ENSMUST00000217004	processed_pseudogene		9	-1	78943636	1299
ENSMUSG00000028975	protein_coding	Pex14	ENSMUST00000134747	nonsense_mediated_decay		4	-1	149099809	358
ENSMUSG00000030177	protein_coding	Ccdc77	ENSMUST00000123114	retained_intron		6	-1	120357377	981
ENSMUSG00000107659	antisense	Gm44170	ENSMUST00000203181	antisense		6	1	88503605	549
ENSMUSG00000030177	protein_coding	Ccdc77	ENSMUST00000137271	retained_intron		6	-1	120350390	3413
ENSMUSG00000028975	protein_coding	Pex14	ENSMUST00000148203	processed_transcript		4	-1	149099828	514
ENSMUSG00000055670	protein_coding	Zzef1	ENSMUST00000150551	retained_intron		11	1	72796226	2918
ENSMUSG00000111363	lincRNA	Gm35024	ENSMUST00000213359	lincRNA		9	-1	79029752	972
ENSMUSG00000030177	protein_coding	Ccdc77	ENSMUST00000146667	protein_coding		6	-1	120364356	574
ENSMUSG00000081086	processed_pseudogene	Gm9506	ENSMUST00000118516	processed_pseudogene		4	1	149096383	320
ENSMUSG00000030177	protein_coding	Ccdc77	ENSMUST00000153435	retained_intron		6	-1	120357367	436
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000128828	retained_intron		2	-1	131054036	1402
ENSMUSG00000110923	lincRNA	Gm47499	ENSMUST00000216797	lincRNA		9	-1	79202007	227
ENSMUSG00000086740	antisense	Gm17029	ENSMUST00000145143	antisense		4	1	148960297	560
ENSMUSG00000036565	protein_coding	Ttyh3	ENSMUST00000042661	protein_coding	principal1	5	-1	140649031	4658
ENSMUSG00000086740	antisense	Gm17029	ENSMUST00000146124	antisense		4	1	148960326	2899
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000054668	protein_coding	principal1	1	-1	16519228	2907
ENSMUSG00000022008	protein_coding	Gpalpp1	ENSMUST00000022585	protein_coding	principal1	14	-1	76110760	5389
ENSMUSG00000086740	antisense	Gm17029	ENSMUST00000153443	antisense		4	1	148960360	2758
ENSMUSG00000036565	protein_coding	Ttyh3	ENSMUST00000199157	protein_coding		5	-1	140627287	791
ENSMUSG00000036565	protein_coding	Ttyh3	ENSMUST00000198765	retained_intron		5	-1	140631608	472
ENSMUSG00000102020	lincRNA	Gm28620	ENSMUST00000190463	lincRNA		9	1	79238620	439
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000149320	protein_coding		1	-1	16519307	2214
ENSMUSG00000111638	lincRNA	Gm47501	ENSMUST00000215508	lincRNA		9	-1	79267651	281
ENSMUSG00000036565	protein_coding	Ttyh3	ENSMUST00000198704	retained_intron		5	-1	140636467	1273
ENSMUSG00000111670	processed_pseudogene	Gm47500	ENSMUST00000214836	processed_pseudogene		9	1	79263892	384
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000131257	protein_coding		1	-1	16520067	3616
ENSMUSG00000036565	protein_coding	Ttyh3	ENSMUST00000200302	processed_transcript		5	-1	140648997	438
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000159558	protein_coding		1	-1	16519211	3901
ENSMUSG00000110856	processed_pseudogene	Gm49264	ENSMUST00000214232	processed_pseudogene		9	-1	79342940	705
ENSMUSG00000034334	protein_coding	Fam151b	ENSMUST00000225299	nonsense_mediated_decay		13	-1	92484015	1196
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000144138	protein_coding		1	-1	16520020	585
ENSMUSG00000109619	lincRNA	Gm45672	ENSMUST00000209700	lincRNA		7	-1	133333201	768
ENSMUSG00000027983	protein_coding	Cyp2u1	ENSMUST00000106337	protein_coding	principal1	3	-1	131303224	4378
ENSMUSG00000111492	processed_pseudogene	Aldoa-ps3	ENSMUST00000217558	processed_pseudogene		9	-1	79346626	306
ENSMUSG00000027983	protein_coding	Cyp2u1	ENSMUST00000200236	protein_coding		3	-1	131303200	1716
ENSMUSG00000111336	processed_pseudogene	Aldoa-ps4	ENSMUST00000216332	processed_pseudogene		9	1	79346774	753
ENSMUSG00000034334	protein_coding	Fam151b	ENSMUST00000040106	protein_coding	principal1	13	-1	92484013	1152
ENSMUSG00000027983	protein_coding	Cyp2u1	ENSMUST00000198606	processed_transcript		3	-1	131303227	1873
ENSMUSG00000111633	lincRNA	Gm39377	ENSMUST00000214587	lincRNA		9	-1	79390855	2533
ENSMUSG00000038980	protein_coding	Rbbp8nl	ENSMUST00000038529	protein_coding	principal1	2	-1	180289879	2319
ENSMUSG00000114948	processed_pseudogene	Gm6066	ENSMUST00000225258	processed_pseudogene		14	1	60441979	475
ENSMUSG00000111560	processed_pseudogene	Gm35262	ENSMUST00000215133	processed_pseudogene		9	-1	79395469	267
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000162751	protein_coding	principal1	1	-1	16519306	3030
ENSMUSG00000111765	lincRNA	Gm10635	ENSMUST00000217201	lincRNA		9	-1	79519302	3721
ENSMUSG00000097261	lincRNA	4930532G15Rik	ENSMUST00000180632	lincRNA		1	-1	185362865	699
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000115359	protein_coding		1	-1	16519260	1151
ENSMUSG00000097261	lincRNA	4930532G15Rik	ENSMUST00000195314	lincRNA		1	-1	185362865	1457
ENSMUSG00000111207	processed_pseudogene	Gm8125	ENSMUST00000216602	processed_pseudogene		9	1	79573808	738
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000027052	protein_coding		1	-1	16519306	2763
ENSMUSG00000101797	lincRNA	Gm29266	ENSMUST00000190392	lincRNA		14	1	60485208	600
ENSMUSG00000114408	processed_pseudogene	Gm47810	ENSMUST00000224210	processed_pseudogene		14	-1	60596902	518
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000162007	protein_coding		1	-1	16519240	2964
ENSMUSG00000087255	processed_pseudogene	Gm6985	ENSMUST00000121255	processed_pseudogene		X	1	93638614	271
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000127420	nonsense_mediated_decay		1	-1	16519253	3081
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000111758	protein_coding		6	-1	143099776	4062
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000128957	protein_coding		1	-1	16519247	3907
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000115360	processed_transcript		1	-1	16375395	2198
ENSMUSG00000108436	antisense	Gm44851	ENSMUST00000205735	antisense		7	1	80404269	2309
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000153966	protein_coding		1	-1	16520080	455
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000162435	protein_coding		1	-1	16520112	2735
ENSMUSG00000104754	processed_pseudogene	Gm43116	ENSMUST00000199789	processed_pseudogene		3	1	131360556	195
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000151888	protein_coding		1	-1	16519270	369
ENSMUSG00000030530	protein_coding	Furin	ENSMUST00000146771	retained_intron		7	-1	80396353	5736
ENSMUSG00000025920	protein_coding	Stau2	ENSMUST00000145092	protein_coding		1	-1	16520021	564
ENSMUSG00000089982	antisense	Gm7568	ENSMUST00000160446	antisense		1	1	16253592	709
ENSMUSG00000089982	antisense	Gm7568	ENSMUST00000159190	antisense		1	1	16253629	230
ENSMUSG00000089982	antisense	Gm7568	ENSMUST00000161626	antisense		1	1	16253592	415
ENSMUSG00000050931	protein_coding	Sgms2	ENSMUST00000090246	protein_coding	principal1	3	-1	131344933	5801
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000204655	protein_coding	alternative1	6	-1	143099767	3526
ENSMUSG00000050931	protein_coding	Sgms2	ENSMUST00000126569	protein_coding		3	-1	131344940	767
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000164822	protein_coding	principal2	14	1	73142537	3531
ENSMUSG00000050931	protein_coding	Sgms2	ENSMUST00000197057	protein_coding		3	-1	131490479	364
ENSMUSG00000050931	protein_coding	Sgms2	ENSMUST00000200431	processed_transcript		3	-1	131491411	509
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000165429	protein_coding		14	1	73142558	837
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000203187	protein_coding	principal4	6	-1	143100071	3494
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000163546	retained_intron		14	1	73142707	1462
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000204635	retained_intron		6	-1	143013712	909
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000170368	protein_coding		14	1	73142723	559
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000203673	protein_coding	alternative1	6	-1	143100005	3332
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000171767	protein_coding		14	1	73142863	2692
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000205117	retained_intron		6	-1	143021847	2993
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000163533	protein_coding		14	1	73142992	762
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000171163	retained_intron		14	1	73143009	2674
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000165334	retained_intron		14	1	73143017	649
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000030439	protein_coding	principal3	4	-1	117497052	3029
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000170677	protein_coding	alternative2	14	1	73143062	3573
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000102690	protein_coding		4	-1	117288772	1842
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000167401	protein_coding		14	1	73143076	868
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000169513	protein_coding	alternative2	14	1	73143099	3622
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000221654	protein_coding	alternative2	4	-1	117289446	1949
ENSMUSG00000027655	protein_coding	Dhx35	ENSMUST00000029186	protein_coding		2	1	158794807	3212
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000094853	protein_coding	alternative2	4	-1	117375457	1675
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000165646	retained_intron		14	1	73143110	591
ENSMUSG00000022489	protein_coding	Pde1b	ENSMUST00000226468	nonsense_mediated_decay		15	1	103503034	4215
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000165727	protein_coding		14	1	73143110	465
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000165567	protein_coding		14	1	73143157	749
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000203349	retained_intron		6	-1	143100107	4584
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000022702	protein_coding	principal2	14	1	73143162	2971
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000204043	protein_coding		6	-1	143067085	543
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000128122	processed_transcript		4	-1	117289830	1330
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000223371	retained_intron		4	-1	117273783	728
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000204233	retained_intron		6	-1	143050188	359
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000221157	retained_intron		4	-1	117273400	720
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000167021	protein_coding		14	1	73143400	702
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000204967	retained_intron		6	-1	143099849	3122
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000151829	protein_coding		4	-1	117285474	761
ENSMUSG00000030530	protein_coding	Furin	ENSMUST00000122232	protein_coding	principal1	7	-1	80402762	4286
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000204160	processed_transcript		6	-1	143081420	685
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000223182	retained_intron		4	-1	117289285	534
ENSMUSG00000019923	protein_coding	Zwint	ENSMUST00000020081	protein_coding	principal1	10	1	72654845	1834
ENSMUSG00000054582	protein_coding	Pabpc1l	ENSMUST00000067715	protein_coding	principal1	2	1	164025450	2354
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000203537	retained_intron		6	-1	143079977	573
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000164298	nonsense_mediated_decay		14	1	73161940	1471
ENSMUSG00000022489	protein_coding	Pde1b	ENSMUST00000023132	protein_coding	principal2	15	1	103503034	3218
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000154974	retained_intron		4	-1	117289442	1492
ENSMUSG00000030530	protein_coding	Furin	ENSMUST00000120753	protein_coding	principal1	7	-1	80401707	4332
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000133971	retained_intron		4	-1	117289113	343
ENSMUSG00000019923	protein_coding	Zwint	ENSMUST00000105431	protein_coding	principal1	10	1	72654895	2676
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000204140	protein_coding		6	-1	143100141	771
ENSMUSG00000054582	protein_coding	Pabpc1l	ENSMUST00000141671	processed_transcript		2	1	164031171	617
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000163797	nonsense_mediated_decay		14	1	73161940	1255
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000150148	retained_intron		4	-1	117300028	713
ENSMUSG00000030530	protein_coding	Furin	ENSMUST00000206352	nonsense_mediated_decay		7	-1	80402577	378
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000205079	retained_intron		6	-1	143100078	836
ENSMUSG00000054582	protein_coding	Pabpc1l	ENSMUST00000156087	processed_transcript		2	1	164037000	438
ENSMUSG00000022489	protein_coding	Pde1b	ENSMUST00000226493	protein_coding		15	1	103503277	775
ENSMUSG00000019923	protein_coding	Zwint	ENSMUST00000160337	protein_coding	principal1	10	1	72654896	1138
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000138435	retained_intron		4	-1	117496949	2630
ENSMUSG00000054582	protein_coding	Pabpc1l	ENSMUST00000126272	processed_transcript		2	1	164047387	750
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000166875	protein_coding		14	1	73173884	357
ENSMUSG00000030530	protein_coding	Furin	ENSMUST00000153446	retained_intron		7	-1	80399469	2778
ENSMUSG00000028677	protein_coding	Rnf220	ENSMUST00000123222	processed_transcript		4	-1	117495011	458
ENSMUSG00000054582	protein_coding	Pabpc1l	ENSMUST00000150523	processed_transcript		2	1	164048010	328
ENSMUSG00000014725	protein_coding	Adam28	ENSMUST00000111072	protein_coding	alternative2	14	-1	68655842	3025
ENSMUSG00000022489	protein_coding	Pde1b	ENSMUST00000227955	protein_coding	alternative1	15	1	103514920	3258
ENSMUSG00000019923	protein_coding	Zwint	ENSMUST00000160128	retained_intron		10	1	72655443	824
ENSMUSG00000030530	protein_coding	Furin	ENSMUST00000135306	protein_coding		7	-1	80405436	453
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000170278	retained_intron		14	1	73174451	1859
ENSMUSG00000019923	protein_coding	Zwint	ENSMUST00000163046	retained_intron		10	1	72656237	780
ENSMUSG00000086876	antisense	Gm12828	ENSMUST00000136115	antisense		4	1	117445950	289
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000171349	protein_coding	alternative1	6	-1	143100107	4292
ENSMUSG00000022489	protein_coding	Pde1b	ENSMUST00000227925	retained_intron		15	1	103523718	923
ENSMUSG00000030530	protein_coding	Furin	ENSMUST00000147150	protein_coding		7	-1	80403322	339
ENSMUSG00000014725	protein_coding	Adam28	ENSMUST00000022642	protein_coding	principal4	14	-1	68655842	3110
ENSMUSG00000019923	protein_coding	Zwint	ENSMUST00000219352	protein_coding		10	1	72656244	380
ENSMUSG00000030279	protein_coding	C2cd5	ENSMUST00000087485	protein_coding		6	-1	143100107	4265
ENSMUSG00000030530	protein_coding	Furin	ENSMUST00000107362	protein_coding	principal1	7	-1	80405431	4166
ENSMUSG00000087228	lincRNA	Gm12827	ENSMUST00000132690	lincRNA		4	1	117496452	660
ENSMUSG00000014725	protein_coding	Adam28	ENSMUST00000224039	protein_coding	alternative2	14	-1	68655842	2638
ENSMUSG00000085749	antisense	Gm12843	ENSMUST00000137607	antisense		4	1	117295817	601
ENSMUSG00000055670	protein_coding	Zzef1	ENSMUST00000207107	protein_coding	alternative2	11	1	72796254	11306
ENSMUSG00000014725	protein_coding	Adam28	ENSMUST00000230006	retained_intron		14	-1	68623754	2286
ENSMUSG00000106754	lincRNA	Gm43101	ENSMUST00000200903	lincRNA		5	1	75727605	438
ENSMUSG00000106754	lincRNA	Gm43101	ENSMUST00000201733	lincRNA		5	1	75734830	488
ENSMUSG00000085749	antisense	Gm12843	ENSMUST00000139618	antisense		4	1	117296144	415
ENSMUSG00000014725	protein_coding	Adam28	ENSMUST00000224131	retained_intron		14	-1	68655782	3713
ENSMUSG00000111029	unprocessed_pseudogene	Olfr1244-ps1	ENSMUST00000213226	unprocessed_pseudogene		2	-1	89538165	683
ENSMUSG00000022701	protein_coding	Ccdc191	ENSMUST00000132859	protein_coding	alternative2	16	1	43889800	3779
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000169479	protein_coding	principal2	14	1	73151485	3351
ENSMUSG00000055670	protein_coding	Zzef1	ENSMUST00000145393	processed_transcript		11	1	72842994	672
ENSMUSG00000107251	TEC	Gm43102	ENSMUST00000201004	TEC		5	1	75737882	2324
ENSMUSG00000014725	protein_coding	Adam28	ENSMUST00000225767	protein_coding		14	-1	68655816	778
ENSMUSG00000022701	protein_coding	Ccdc191	ENSMUST00000178400	protein_coding	principal2	16	1	43889800	3745
ENSMUSG00000022464	protein_coding	Slc38a4	ENSMUST00000231039	protein_coding	principal1	15	-1	97019951	3923
ENSMUSG00000022106	protein_coding	Rcbtb2	ENSMUST00000110952	protein_coding	principal2	14	1	73143593	2176
ENSMUSG00000106726	lincRNA	Gm43100	ENSMUST00000202985	lincRNA		5	-1	75758886	674
ENSMUSG00000022701	protein_coding	Ccdc191	ENSMUST00000122014	retained_intron		16	1	43889899	1822
ENSMUSG00000111456	protein_coding	Olfr1245	ENSMUST00000217402	protein_coding	principal1	2	-1	89578447	2610
ENSMUSG00000107061	lincRNA	Gm19590	ENSMUST00000201551	lincRNA		5	-1	75835645	1195
ENSMUSG00000055670	protein_coding	Zzef1	ENSMUST00000152481	retained_intron		11	1	72912296	2800
ENSMUSG00000022701	protein_coding	Ccdc191	ENSMUST00000151183	protein_coding		16	1	43889940	487
ENSMUSG00000022464	protein_coding	Slc38a4	ENSMUST00000023101	protein_coding	principal1	15	-1	97055956	3932
ENSMUSG00000111456	protein_coding	Olfr1245	ENSMUST00000214870	protein_coding	principal1	2	-1	89575773	1062
ENSMUSG00000055670	protein_coding	Zzef1	ENSMUST00000152063	retained_intron		11	1	72914943	2937
ENSMUSG00000022701	protein_coding	Ccdc191	ENSMUST00000145999	processed_transcript		16	1	43939003	208
ENSMUSG00000103684	TEC	Gm38180	ENSMUST00000192381	TEC		5	1	75846089	395
ENSMUSG00000055670	protein_coding	Zzef1	ENSMUST00000125122	retained_intron		11	1	72920843	4197
ENSMUSG00000022701	protein_coding	Ccdc191	ENSMUST00000122440	protein_coding		16	1	43939124	2310
ENSMUSG00000022105	protein_coding	Rb1	ENSMUST00000163932	processed_transcript		14	-1	73287707	411
ENSMUSG00000022464	protein_coding	Slc38a4	ENSMUST00000230086	protein_coding	principal1	15	-1	97031211	1963
ENSMUSG00000100936	lincRNA	Gm28865	ENSMUST00000187685	lincRNA		5	-1	75852958	723
ENSMUSG00000022464	protein_coding	Slc38a4	ENSMUST00000230907	protein_coding		15	-1	97050087	637
ENSMUSG00000094530	processed_pseudogene	Gm21399	ENSMUST00000180210	processed_pseudogene		8	1	129252998	597
ENSMUSG00000107698	TEC	Gm44430	ENSMUST00000203376	TEC		6	1	88519013	995
ENSMUSG00000022464	protein_coding	Slc38a4	ENSMUST00000166223	protein_coding	principal1	15	-1	97020322	1908
ENSMUSG00000110605	lincRNA	Gm32856	ENSMUST00000212180	lincRNA		8	1	129263641	1134
ENSMUSG00000110605	lincRNA	Gm32856	ENSMUST00000212145	lincRNA		8	1	129263648	3767
ENSMUSG00000055670	protein_coding	Zzef1	ENSMUST00000069395	protein_coding	principal2	11	1	72796226	11150
ENSMUSG00000055670	protein_coding	Zzef1	ENSMUST00000172220	protein_coding	alternative2	11	1	72796226	11249
ENSMUSG00000116295	lincRNA	Gm32885	ENSMUST00000229245	lincRNA		15	-1	97167242	593
ENSMUSG00000116295	lincRNA	Gm32885	ENSMUST00000231024	lincRNA		15	-1	97167244	655
ENSMUSG00000009596	protein_coding	Taf7l	ENSMUST00000009740	protein_coding	principal1	X	-1	134476490	1933
ENSMUSG00000116295	lincRNA	Gm32885	ENSMUST00000229999	lincRNA		15	-1	97167243	510
ENSMUSG00000009596	protein_coding	Taf7l	ENSMUST00000113223	protein_coding		X	-1	134474993	1155
ENSMUSG00000116295	lincRNA	Gm32885	ENSMUST00000229491	lincRNA		15	-1	97167222	372
ENSMUSG00000009596	protein_coding	Taf7l	ENSMUST00000131311	processed_transcript		X	-1	134474988	660
ENSMUSG00000097527	lincRNA	1700112J16Rik	ENSMUST00000181631	lincRNA		7	-1	67222458	2215
ENSMUSG00000022704	protein_coding	Qtrt2	ENSMUST00000156568	nonsense_mediated_decay		16	-1	43889648	3856
ENSMUSG00000097527	lincRNA	1700112J16Rik	ENSMUST00000208802	lincRNA		7	-1	67222536	361
ENSMUSG00000032396	protein_coding	Dis3l	ENSMUST00000068367	protein_coding		9	-1	64341288	3605
ENSMUSG00000108225	processed_pseudogene	Gm43926	ENSMUST00000203978	processed_pseudogene		6	1	116953519	430
ENSMUSG00000034947	protein_coding	Tmem106a	ENSMUST00000039581	protein_coding	principal1	11	1	101582242	2304
ENSMUSG00000107415	processed_pseudogene	Gm43929	ENSMUST00000203025	processed_pseudogene		6	1	116982019	409
ENSMUSG00000028675	protein_coding	Pnrc2	ENSMUST00000030436	protein_coding	principal1	4	-1	135873850	1919
ENSMUSG00000034947	protein_coding	Tmem106a	ENSMUST00000100403	protein_coding	principal1	11	1	101582242	2428
ENSMUSG00000032396	protein_coding	Dis3l	ENSMUST00000134843	retained_intron		9	-1	64341156	1575
ENSMUSG00000107903	TEC	Gm43930	ENSMUST00000203868	TEC		6	1	117144325	845
ENSMUSG00000028675	protein_coding	Pnrc2	ENSMUST00000142585	protein_coding		4	-1	135873570	630
ENSMUSG00000014791	protein_coding	Elmo3	ENSMUST00000212046	nonsense_mediated_decay		8	1	105305601	2303
ENSMUSG00000027655	protein_coding	Dhx35	ENSMUST00000145692	processed_transcript		2	1	158794862	3249
ENSMUSG00000028675	protein_coding	Pnrc2	ENSMUST00000180300	protein_coding		4	-1	135873061	171
ENSMUSG00000027655	protein_coding	Dhx35	ENSMUST00000109478	protein_coding	principal1	2	1	158794807	3284
ENSMUSG00000108038	lincRNA	D030044L04Rik	ENSMUST00000204220	lincRNA		6	1	117160773	1291
ENSMUSG00000022704	protein_coding	Qtrt2	ENSMUST00000023387	protein_coding		16	-1	43889685	2838
ENSMUSG00000034947	protein_coding	Tmem106a	ENSMUST00000143045	processed_transcript		11	1	101582244	1021
ENSMUSG00000022704	protein_coding	Qtrt2	ENSMUST00000143858	retained_intron		16	-1	43867555	664
ENSMUSG00000034947	protein_coding	Tmem106a	ENSMUST00000107194	protein_coding		11	1	101582257	664
ENSMUSG00000022009	protein_coding	Nufip1	ENSMUST00000022586	protein_coding	principal1	14	1	76110891	3974
ENSMUSG00000027655	protein_coding	Dhx35	ENSMUST00000146797	retained_intron		2	1	158794865	3352
ENSMUSG00000034947	protein_coding	Tmem106a	ENSMUST00000128614	protein_coding		11	1	101582300	893
ENSMUSG00000027655	protein_coding	Dhx35	ENSMUST00000133720	processed_transcript		2	1	158795923	328
ENSMUSG00000029254	protein_coding	Stap1	ENSMUST00000198435	protein_coding	principal1	5	1	86071746	3350
ENSMUSG00000044250	protein_coding	Pced1b	ENSMUST00000059433	protein_coding	principal1	15	1	97247107	2185
ENSMUSG00000027655	protein_coding	Dhx35	ENSMUST00000148359	processed_transcript		2	1	158794891	654
ENSMUSG00000032396	protein_coding	Dis3l	ENSMUST00000120760	protein_coding		9	-1	64341153	3661
ENSMUSG00000034947	protein_coding	Tmem106a	ENSMUST00000128659	processed_transcript		11	1	101585997	1069
ENSMUSG00000027655	protein_coding	Dhx35	ENSMUST00000156893	protein_coding		2	1	158794885	643
ENSMUSG00000044250	protein_coding	Pced1b	ENSMUST00000226615	processed_transcript		15	1	97249073	10
ENSMUSG00000091831	protein_coding	Gm4707	ENSMUST00000171504	translated_processed_pseudogene		17	-1	71459918	1452
ENSMUSG00000032396	protein_coding	Dis3l	ENSMUST00000113890	protein_coding		9	-1	64340457	3224
ENSMUSG00000044250	protein_coding	Pced1b	ENSMUST00000228521	protein_coding	principal1	15	1	97361202	1790
ENSMUSG00000091831	protein_coding	Gm4707	ENSMUST00000183937	protein_coding	principal1	17	-1	71459300	276
ENSMUSG00000027655	protein_coding	Dhx35	ENSMUST00000157070	processed_transcript		2	1	158827418	610
ENSMUSG00000022704	protein_coding	Qtrt2	ENSMUST00000146343	nonsense_mediated_decay		16	-1	43926809	1457
ENSMUSG00000044250	protein_coding	Pced1b	ENSMUST00000226495	protein_coding		15	1	97361217	441
ENSMUSG00000027655	protein_coding	Dhx35	ENSMUST00000143195	processed_transcript		2	1	158850629	514
ENSMUSG00000102863	TEC	Gm37639	ENSMUST00000191623	TEC		17	-1	71368836	2785
ENSMUSG00000022704	protein_coding	Qtrt2	ENSMUST00000239112	protein_coding	principal1	16	-1	43881213	1303
ENSMUSG00000032396	protein_coding	Dis3l	ENSMUST00000154076	protein_coding		9	-1	64336597	535
ENSMUSG00000001119	protein_coding	Col6a1	ENSMUST00000001147	protein_coding	principal1	10	-1	76726168	4100
ENSMUSG00000117103	processed_pseudogene	Gm49916	ENSMUST00000232892	processed_pseudogene		17	1	71421547	151
ENSMUSG00000116291	processed_pseudogene	Gm4383	ENSMUST00000229443	processed_pseudogene		15	-1	97302974	623
ENSMUSG00000056061	antisense	Gata5os	ENSMUST00000069943	antisense		2	1	180332857	1678
ENSMUSG00000050625	protein_coding	Ccdc121	ENSMUST00000058825	protein_coding	principal1	1	-1	181511451	1819
ENSMUSG00000022704	protein_coding	Qtrt2	ENSMUST00000144626	retained_intron		16	-1	43869395	471
ENSMUSG00000032396	protein_coding	Dis3l	ENSMUST00000144257	processed_transcript		9	-1	64340763	485
ENSMUSG00000048218	protein_coding	Amigo2	ENSMUST00000229890	protein_coding	principal1	15	-1	97247122	2998
ENSMUSG00000032396	protein_coding	Dis3l	ENSMUST00000128129	retained_intron		9	-1	64341257	441
ENSMUSG00000022704	protein_coding	Qtrt2	ENSMUST00000131360	nonsense_mediated_decay		16	-1	43889656	1173
ENSMUSG00000001119	protein_coding	Col6a1	ENSMUST00000137599	retained_intron		10	-1	76719236	925
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000138193	processed_transcript		17	-1	71356496	1485
ENSMUSG00000022704	protein_coding	Qtrt2	ENSMUST00000151963	retained_intron		16	-1	43876964	484
ENSMUSG00000029254	protein_coding	Stap1	ENSMUST00000123393	retained_intron		5	1	86071750	2026
ENSMUSG00000048218	protein_coding	Amigo2	ENSMUST00000053106	protein_coding	principal1	15	-1	97247287	2801
ENSMUSG00000022704	protein_coding	Qtrt2	ENSMUST00000134792	processed_transcript		16	-1	43889655	446
ENSMUSG00000029254	protein_coding	Stap1	ENSMUST00000151556	retained_intron		5	1	86071774	1903
ENSMUSG00000022704	protein_coding	Qtrt2	ENSMUST00000124674	processed_transcript		16	-1	43889656	392
ENSMUSG00000029254	protein_coding	Stap1	ENSMUST00000132546	retained_intron		5	1	86071783	1981
ENSMUSG00000029254	protein_coding	Stap1	ENSMUST00000031171	protein_coding		5	1	86071812	909
ENSMUSG00000029254	protein_coding	Stap1	ENSMUST00000138076	retained_intron		5	1	86086458	523
ENSMUSG00000015627	protein_coding	Gata5	ENSMUST00000015771	protein_coding	principal1	2	-1	180334699	3277
ENSMUSG00000023460	protein_coding	Rab12	ENSMUST00000070538	protein_coding	alternative2	17	-1	66519729	2069
ENSMUSG00000032396	protein_coding	Dis3l	ENSMUST00000168844	protein_coding	principal1	9	-1	64341257	3575
ENSMUSG00000022105	protein_coding	Rb1	ENSMUST00000022701	protein_coding	principal1	14	-1	73325822	4656
ENSMUSG00000023460	protein_coding	Rab12	ENSMUST00000155026	retained_intron		17	-1	66500319	629
ENSMUSG00000023460	protein_coding	Rab12	ENSMUST00000135620	processed_transcript		17	-1	66519377	381
ENSMUSG00000023460	protein_coding	Rab12	ENSMUST00000146279	retained_intron		17	-1	66519710	669
ENSMUSG00000095427	processed_pseudogene	Rps2-ps6	ENSMUST00000095471	processed_pseudogene		14	-1	76237545	855
ENSMUSG00000022105	protein_coding	Rb1	ENSMUST00000168495	retained_intron		14	-1	73203266	946
ENSMUSG00000023460	protein_coding	Rab12	ENSMUST00000167962	protein_coding	principal2	17	-1	66519670	2010
ENSMUSG00000022105	protein_coding	Rb1	ENSMUST00000170967	processed_transcript		14	-1	73239786	408
ENSMUSG00000047557	protein_coding	Lxn	ENSMUST00000058981	protein_coding	principal1	3	-1	67463926	1112
ENSMUSG00000115625	lincRNA	2900040C04Rik	ENSMUST00000227933	lincRNA		14	1	76251457	459
ENSMUSG00000022105	protein_coding	Rb1	ENSMUST00000169002	retained_intron		14	-1	73264321	355
ENSMUSG00000022105	protein_coding	Rb1	ENSMUST00000164624	nonsense_mediated_decay		14	-1	73325641	324
ENSMUSG00000047557	protein_coding	Lxn	ENSMUST00000160827	retained_intron		3	-1	67461634	850
ENSMUSG00000070641	processed_pseudogene	Gm16410	ENSMUST00000094550	processed_pseudogene		X	1	134489370	774
ENSMUSG00000096144	lincRNA	B020004C17Rik	ENSMUST00000225045	lincRNA		14	1	57015134	2385
ENSMUSG00000047557	protein_coding	Lxn	ENSMUST00000160202	retained_intron		3	-1	67463782	689
ENSMUSG00000090706	antisense	Gm17233	ENSMUST00000168470	antisense		14	-1	73187321	698
ENSMUSG00000117235	lincRNA	Gm49938	ENSMUST00000233785	lincRNA		17	1	66532103	554
ENSMUSG00000084843	lincRNA	B230312C02Rik	ENSMUST00000145549	lincRNA		2	-1	180385885	1703
ENSMUSG00000033446	protein_coding	Lpar6	ENSMUST00000044405	protein_coding	principal1	14	1	73237895	5400
ENSMUSG00000048007	protein_coding	Timm8a1	ENSMUST00000054213	protein_coding	principal1	X	-1	134541865	1421
ENSMUSG00000083275	processed_pseudogene	Gm4993	ENSMUST00000118719	processed_pseudogene		X	1	120957711	1174
ENSMUSG00000024105	protein_coding	Themis3	ENSMUST00000024914	protein_coding	principal1	17	-1	66594621	2544
ENSMUSG00000027774	protein_coding	Gfm1	ENSMUST00000077271	protein_coding	principal1	3	1	67430096	4078
ENSMUSG00000048582	protein_coding	Gja3	ENSMUST00000061614	protein_coding	principal1	14	-1	57058100	2766
ENSMUSG00000048582	protein_coding	Gja3	ENSMUST00000223792	protein_coding		14	-1	57057723	284
ENSMUSG00000027774	protein_coding	Gfm1	ENSMUST00000161009	processed_transcript		3	1	67430116	1971
ENSMUSG00000117186	processed_pseudogene	Gm46576	ENSMUST00000233257	processed_pseudogene		17	-1	66625042	149
ENSMUSG00000027774	protein_coding	Gfm1	ENSMUST00000160529	retained_intron		3	1	67456479	924
ENSMUSG00000046352	protein_coding	Gjb2	ENSMUST00000055698	protein_coding	principal1	14	-1	57104702	2406
ENSMUSG00000030976	protein_coding	Tex36	ENSMUST00000033275	protein_coding	principal1	7	-1	133602158	958
ENSMUSG00000110026	lincRNA	Gm35625	ENSMUST00000211040	lincRNA		7	1	133605493	266
ENSMUSG00000110026	lincRNA	Gm35625	ENSMUST00000210416	lincRNA		7	1	133605527	316
ENSMUSG00000109917	lincRNA	Gm45671	ENSMUST00000210229	lincRNA		7	1	133608226	3920
ENSMUSG00000101546	lincRNA	Gm28747	ENSMUST00000185366	lincRNA		7	-1	133627725	571
ENSMUSG00000086608	antisense	4930562D21Rik	ENSMUST00000123894	antisense		9	1	79688776	1750
ENSMUSG00000085486	protein_coding	Gm11634	ENSMUST00000154147	protein_coding	alternative2	11	-1	101599256	755
ENSMUSG00000085486	protein_coding	Gm11634	ENSMUST00000209862	protein_coding	principal5	11	-1	101599185	573
ENSMUSG00000014791	protein_coding	Elmo3	ENSMUST00000109375	protein_coding	principal1	8	1	105305609	3189
ENSMUSG00000086617	lincRNA	Gm11635	ENSMUST00000131042	lincRNA		11	1	101610614	182
ENSMUSG00000014791	protein_coding	Elmo3	ENSMUST00000212033	protein_coding		8	1	105305613	2351
ENSMUSG00000086617	lincRNA	Gm11635	ENSMUST00000139424	lincRNA		11	1	101610700	472
ENSMUSG00000014791	protein_coding	Elmo3	ENSMUST00000212345	retained_intron		8	1	105305643	521
ENSMUSG00000014791	protein_coding	Elmo3	ENSMUST00000212655	retained_intron		8	1	105306345	738
ENSMUSG00000103703	TEC	Gm42568	ENSMUST00000195639	TEC		3	1	67476978	1841
ENSMUSG00000018565	protein_coding	Elp5	ENSMUST00000142788	nonsense_mediated_decay		11	-1	69980272	899
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000018212	protein_coding	principal1	11	-1	86257550	5906
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000108039	protein_coding	principal1	11	-1	86256546	4369
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000239304	protein_coding		19	-1	40376874	3313
ENSMUSG00000049404	protein_coding	Rarres1	ENSMUST00000054825	protein_coding	principal1	3	-1	67515523	1325
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000134828	nonsense_mediated_decay		11	-1	86229233	721
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000146421	retained_intron		11	-1	86232176	684
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000134883	retained_intron		11	-1	86257541	3414
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000127745	retained_intron		11	-1	86238883	3181
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000139285	protein_coding		11	-1	86257575	638
ENSMUSG00000018565	protein_coding	Elp5	ENSMUST00000108594	protein_coding	principal1	11	-1	69981252	1454
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000132024	protein_coding		11	-1	86257554	694
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000136469	protein_coding		11	-1	86257518	695
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000130614	retained_intron		11	-1	86257340	282
ENSMUSG00000018068	protein_coding	Ints2	ENSMUST00000141756	processed_transcript		11	-1	86257565	328
ENSMUSG00000018565	protein_coding	Elp5	ENSMUST00000123701	retained_intron		11	-1	69980263	1259
ENSMUSG00000018565	protein_coding	Elp5	ENSMUST00000151766	retained_intron		11	-1	69969403	479
ENSMUSG00000018565	protein_coding	Elp5	ENSMUST00000127437	nonsense_mediated_decay		11	-1	69980061	674
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000127430	protein_coding	principal1	17	-1	71475343	7052
ENSMUSG00000018565	protein_coding	Elp5	ENSMUST00000138562	retained_intron		11	-1	69980261	755
ENSMUSG00000040856	protein_coding	Dlk1	ENSMUST00000174539	retained_intron		12	1	109452823	668
ENSMUSG00000018565	protein_coding	Elp5	ENSMUST00000143788	retained_intron		11	-1	69980211	634
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000182049	retained_intron		17	-1	71349006	2497
ENSMUSG00000018565	protein_coding	Elp5	ENSMUST00000108595	protein_coding		11	-1	69981639	803
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000233839	nonsense_mediated_decay		17	-1	71360166	595
ENSMUSG00000018565	protein_coding	Elp5	ENSMUST00000147437	protein_coding		11	-1	69982517	627
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000147111	retained_intron		17	-1	71361959	871
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000182205	retained_intron		17	-1	71353386	2510
ENSMUSG00000018565	protein_coding	Elp5	ENSMUST00000143175	protein_coding		11	-1	69980696	508
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000182107	retained_intron		17	-1	71361192	4107
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000232914	processed_transcript		17	-1	71377030	680
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000136071	retained_intron		17	-1	71391727	411
ENSMUSG00000065990	protein_coding	Aurkaip1	ENSMUST00000139651	protein_coding		4	1	155831272	661
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000183046	retained_intron		17	-1	71394724	820
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000233872	nonsense_mediated_decay		17	-1	71465646	381
ENSMUSG00000024054	protein_coding	Smchd1	ENSMUST00000182747	retained_intron		17	-1	71475328	2790
ENSMUSG00000103558	TEC	Gm38220	ENSMUST00000195774	TEC		17	-1	71393284	1447
ENSMUSG00000018559	protein_coding	Ctdnep1	ENSMUST00000108593	protein_coding	principal1	11	1	69981156	1627
ENSMUSG00000034297	protein_coding	Med13	ENSMUST00000043624	protein_coding	principal1	11	-1	86357602	10546
ENSMUSG00000032332	protein_coding	Col12a1	ENSMUST00000135009	protein_coding		9	-1	79612970	1784
ENSMUSG00000018559	protein_coding	Ctdnep1	ENSMUST00000141623	protein_coding		11	1	69983720	614
ENSMUSG00000034297	protein_coding	Med13	ENSMUST00000136622	processed_transcript		11	-1	86278600	540
ENSMUSG00000018559	protein_coding	Ctdnep1	ENSMUST00000131531	retained_intron		11	1	69984254	649
ENSMUSG00000034297	protein_coding	Med13	ENSMUST00000140514	retained_intron		11	-1	86278992	738
ENSMUSG00000018559	protein_coding	Ctdnep1	ENSMUST00000138246	retained_intron		11	1	69989071	677
ENSMUSG00000034297	protein_coding	Med13	ENSMUST00000144983	retained_intron		11	-1	86332183	481
ENSMUSG00000018559	protein_coding	Ctdnep1	ENSMUST00000152226	processed_transcript		11	1	69989091	620
ENSMUSG00000065990	protein_coding	Aurkaip1	ENSMUST00000084097	protein_coding	principal1	4	1	155831351	1159
ENSMUSG00000085208	antisense	Brip1os	ENSMUST00000128960	antisense		11	1	86201370	4423
ENSMUSG00000065990	protein_coding	Aurkaip1	ENSMUST00000151222	retained_intron		4	1	155831619	600
ENSMUSG00000085208	antisense	Brip1os	ENSMUST00000143819	antisense		11	1	86201383	2604
ENSMUSG00000065990	protein_coding	Aurkaip1	ENSMUST00000105592	protein_coding	principal1	4	1	155831659	1029
ENSMUSG00000065990	protein_coding	Aurkaip1	ENSMUST00000129711	processed_transcript		4	1	155831665	427
ENSMUSG00000065990	protein_coding	Aurkaip1	ENSMUST00000105591	protein_coding	principal1	4	1	155831669	773
ENSMUSG00000103718	lincRNA	Gm35299	ENSMUST00000195865	lincRNA		3	-1	67553425	421
ENSMUSG00000111715	protein_coding	Olfr1246	ENSMUST00000213221	protein_coding	principal1	2	-1	89593157	5338
ENSMUSG00000104382	lincRNA	4930402C01Rik	ENSMUST00000192586	lincRNA		3	-1	67572821	663
ENSMUSG00000111715	protein_coding	Olfr1246	ENSMUST00000217192	protein_coding	principal1	2	-1	89593140	5301
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000115614	protein_coding	alternative2	16	1	18348182	4698
ENSMUSG00000111715	protein_coding	Olfr1246	ENSMUST00000217254	protein_coding	principal1	2	-1	89593126	5411
ENSMUSG00000026864	protein_coding	Hspa5	ENSMUST00000028222	protein_coding	principal1	2	1	34771970	3672
ENSMUSG00000038963	protein_coding	Slco4a1	ENSMUST00000038259	protein_coding	principal1	2	1	180456245	3010
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000103241	protein_coding	alternative1	2	1	124089969	6157
ENSMUSG00000111715	protein_coding	Olfr1246	ENSMUST00000187990	protein_coding	principal1	2	-1	89591146	1078
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000137172	retained_intron		2	1	124089969	713
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000151199	processed_transcript		2	1	124143005	746
ENSMUSG00000038963	protein_coding	Slco4a1	ENSMUST00000139902	processed_transcript		2	1	180456334	3002
ENSMUSG00000038963	protein_coding	Slco4a1	ENSMUST00000038225	protein_coding	principal1	2	1	180460979	3101
ENSMUSG00000032267	protein_coding	Usp28	ENSMUST00000215788	protein_coding		9	1	48985375	489
ENSMUSG00000032267	protein_coding	Usp28	ENSMUST00000216607	retained_intron		9	1	48985385	379
ENSMUSG00000038963	protein_coding	Slco4a1	ENSMUST00000138446	retained_intron		2	1	180467070	901
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000090103	protein_coding	principal3	16	1	18348274	4622
ENSMUSG00000038963	protein_coding	Slco4a1	ENSMUST00000128367	retained_intron		2	1	180472429	2065
ENSMUSG00000010362	protein_coding	Rdm1	ENSMUST00000152484	processed_transcript		11	1	101627195	434
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000115612	protein_coding	alternative2	16	1	18380783	4218
ENSMUSG00000026864	protein_coding	Hspa5	ENSMUST00000100171	protein_coding	principal1	2	1	34772095	2613
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000115613	protein_coding	principal3	16	1	18380783	4236
ENSMUSG00000021013	protein_coding	Ttc8	ENSMUST00000085109	protein_coding	alternative1	12	1	98920574	2272
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000103240	protein_coding	alternative1	2	1	124610601	4372
ENSMUSG00000026864	protein_coding	Hspa5	ENSMUST00000137145	nonsense_mediated_decay		2	1	34772099	477
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000132088	retained_intron		2	1	124610106	4475
ENSMUSG00000026864	protein_coding	Hspa5	ENSMUST00000145466	retained_intron		2	1	34772581	720
ENSMUSG00000026864	protein_coding	Hspa5	ENSMUST00000155595	retained_intron		2	1	34773666	574
ENSMUSG00000026864	protein_coding	Hspa5	ENSMUST00000129333	retained_intron		2	1	34774847	452
ENSMUSG00000021013	protein_coding	Ttc8	ENSMUST00000079146	protein_coding	principal4	12	1	98920612	2270
ENSMUSG00000104352	processed_pseudogene	Gm7182	ENSMUST00000193351	processed_pseudogene		1	-1	5277337	732
ENSMUSG00000021013	protein_coding	Ttc8	ENSMUST00000223023	retained_intron		12	1	98920614	665
ENSMUSG00000039047	protein_coding	Pigk	ENSMUST00000159899	protein_coding	principal1	3	1	152714100	4737
ENSMUSG00000021013	protein_coding	Ttc8	ENSMUST00000132878	protein_coding		12	1	98920820	817
ENSMUSG00000021013	protein_coding	Ttc8	ENSMUST00000124514	processed_transcript		12	1	98943319	781
ENSMUSG00000039047	protein_coding	Pigk	ENSMUST00000162835	retained_intron		3	1	152714106	1440
ENSMUSG00000021013	protein_coding	Ttc8	ENSMUST00000223356	retained_intron		12	1	98943503	406
ENSMUSG00000021013	protein_coding	Ttc8	ENSMUST00000223277	retained_intron		12	1	98964573	942
ENSMUSG00000010362	protein_coding	Rdm1	ENSMUST00000010506	protein_coding	principal1	11	1	101627942	1124
ENSMUSG00000021013	protein_coding	Ttc8	ENSMUST00000168255	processed_transcript		12	1	98974469	638
ENSMUSG00000010362	protein_coding	Rdm1	ENSMUST00000139037	processed_transcript		11	1	101627972	795
ENSMUSG00000021013	protein_coding	Ttc8	ENSMUST00000139298	processed_transcript		12	1	98974498	653
ENSMUSG00000022132	protein_coding	Cldn10	ENSMUST00000047761	protein_coding		14	1	118787908	1148
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000231791	retained_intron		16	1	18392583	1604
ENSMUSG00000010362	protein_coding	Rdm1	ENSMUST00000133727	nonsense_mediated_decay		11	1	101628389	985
ENSMUSG00000039047	protein_coding	Pigk	ENSMUST00000045029	protein_coding		3	1	152714113	1761
ENSMUSG00000010362	protein_coding	Rdm1	ENSMUST00000155222	retained_intron		11	1	101633737	463
ENSMUSG00000033182	protein_coding	Kbtbd12	ENSMUST00000120933	protein_coding	principal1	6	-1	88627442	4644
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000115610	protein_coding	alternative2	16	1	18392589	3829
ENSMUSG00000039047	protein_coding	Pigk	ENSMUST00000162642	nonsense_mediated_decay		3	1	152714113	3641
ENSMUSG00000031776	protein_coding	Arl2bp	ENSMUST00000034228	protein_coding	principal1	8	1	94666600	2063
ENSMUSG00000033182	protein_coding	Kbtbd12	ENSMUST00000184878	protein_coding		6	-1	88618501	3351
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000150253	protein_coding	alternative2	16	1	18392616	4232
ENSMUSG00000039047	protein_coding	Pigk	ENSMUST00000161596	nonsense_mediated_decay		3	1	152714120	2297
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000232025	protein_coding	alternative2	16	1	18392654	3888
ENSMUSG00000033182	protein_coding	Kbtbd12	ENSMUST00000184743	retained_intron		6	-1	88590659	4134
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000155548	processed_transcript		16	1	18397724	568
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000126183	retained_intron		16	1	18399088	732
ENSMUSG00000039047	protein_coding	Pigk	ENSMUST00000200224	nonsense_mediated_decay		3	1	152714123	920
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000150484	processed_transcript		16	1	18401132	507
ENSMUSG00000033182	protein_coding	Kbtbd12	ENSMUST00000184591	retained_intron		6	-1	88627448	1642
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000152132	retained_intron		16	1	18403449	916
ENSMUSG00000039047	protein_coding	Pigk	ENSMUST00000159045	processed_transcript		3	1	152738043	256
ENSMUSG00000031776	protein_coding	Arl2bp	ENSMUST00000109527	protein_coding		8	1	94666723	1133
ENSMUSG00000059824	protein_coding	Dbp	ENSMUST00000080885	protein_coding	principal1	7	1	45705088	1837
ENSMUSG00000022132	protein_coding	Cldn10	ENSMUST00000071546	protein_coding		14	1	118787918	1031
ENSMUSG00000033182	protein_coding	Kbtbd12	ENSMUST00000203223	processed_transcript		6	-1	88618522	291
ENSMUSG00000000325	protein_coding	Arvcf	ENSMUST00000232241	protein_coding		16	1	18403496	801
ENSMUSG00000039047	protein_coding	Pigk	ENSMUST00000051510	nonsense_mediated_decay		3	1	152738262	1097
ENSMUSG00000059824	protein_coding	Dbp	ENSMUST00000211513	protein_coding		7	1	45705269	1156
ENSMUSG00000039047	protein_coding	Pigk	ENSMUST00000160651	processed_transcript		3	1	152763381	415
ENSMUSG00000031776	protein_coding	Arl2bp	ENSMUST00000212580	processed_transcript		8	1	94666724	381
ENSMUSG00000059824	protein_coding	Dbp	ENSMUST00000211357	protein_coding		7	1	45705284	1252
ENSMUSG00000031776	protein_coding	Arl2bp	ENSMUST00000211858	protein_coding		8	1	94666864	318
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000051419	protein_coding	alternative1	2	1	124610296	4503
ENSMUSG00000105894	TEC	Gm42710	ENSMUST00000200608	TEC		3	1	152965433	985
ENSMUSG00000033182	protein_coding	Kbtbd12	ENSMUST00000038804	retained_intron		6	-1	88627445	1572
ENSMUSG00000059824	protein_coding	Dbp	ENSMUST00000211748	retained_intron		7	1	45707104	1732
ENSMUSG00000033182	protein_coding	Kbtbd12	ENSMUST00000184664	protein_coding		6	-1	88637950	647
ENSMUSG00000059824	protein_coding	Dbp	ENSMUST00000210120	retained_intron		7	1	45707889	815
ENSMUSG00000031776	protein_coding	Arl2bp	ENSMUST00000212877	retained_intron		8	1	94667465	572
ENSMUSG00000031776	protein_coding	Arl2bp	ENSMUST00000212254	retained_intron		8	1	94670043	836
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000103238	protein_coding	alternative1	2	1	124653635	3165
ENSMUSG00000022132	protein_coding	Cldn10	ENSMUST00000100314	protein_coding	principal1	14	1	118854732	2128
ENSMUSG00000089666	processed_pseudogene	Gm16269	ENSMUST00000160532	processed_pseudogene		10	1	87000297	409
ENSMUSG00000038127	protein_coding	Ccdc50	ENSMUST00000239351	protein_coding	alternative2	16	1	27388869	1779
ENSMUSG00000089881	antisense	Gm16280	ENSMUST00000162458	antisense		10	1	86908761	623
ENSMUSG00000104046	TEC	Gm37567	ENSMUST00000193241	TEC		1	1	5307739	2279
ENSMUSG00000107723	antisense	Gm43964	ENSMUST00000203570	antisense		6	-1	113641521	301
ENSMUSG00000038127	protein_coding	Ccdc50	ENSMUST00000100026	protein_coding	principal2	16	1	27388869	7089
ENSMUSG00000089656	antisense	Gm16271	ENSMUST00000162837	antisense		10	1	86972216	220
ENSMUSG00000102907	TEC	Gm38264	ENSMUST00000194850	TEC		1	1	5403547	2032
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000226047	protein_coding		19	-1	40513740	2582
ENSMUSG00000067262	protein_coding	Vmn1r239-ps	ENSMUST00000127465	protein_coding	principal5	X	-1	147453707	960
ENSMUSG00000039037	protein_coding	St6galnac5	ENSMUST00000044278	protein_coding	principal1	3	-1	152982246	5667
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000224247	protein_coding	alternative1	19	-1	40513750	2688
ENSMUSG00000067262	protein_coding	Vmn1r239-ps	ENSMUST00000237076	protein_coding	alternative2	X	-1	147453710	936
ENSMUSG00000112862	processed_pseudogene	Gm47094	ENSMUST00000219599	processed_pseudogene		10	1	72717931	560
ENSMUSG00000039037	protein_coding	St6galnac5	ENSMUST00000161757	processed_transcript		3	-1	152982052	628
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225148	protein_coding	alternative1	19	-1	40513673	2379
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000103239	protein_coding	principal4	2	1	124610573	6225
ENSMUSG00000090163	antisense	Gm16231	ENSMUST00000160432	antisense		3	1	152943313	319
ENSMUSG00000090017	antisense	Gm16213	ENSMUST00000160076	antisense		3	1	152920240	639
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000076335	protein_coding	alternative1	2	1	124610296	6276
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000224667	protein_coding		19	-1	40513704	4313
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000078621	protein_coding	alternative1	2	1	124610296	6372
ENSMUSG00000090095	processed_pseudogene	Rpl29-ps1	ENSMUST00000161849	processed_pseudogene		3	-1	152782061	508
ENSMUSG00000074182	protein_coding	Znhit6	ENSMUST00000199033	protein_coding	alternative2	3	1	145576205	1127
ENSMUSG00000027200	protein_coding	Sema6d	ENSMUST00000077847	protein_coding	alternative1	2	1	124610296	6444
ENSMUSG00000090040	processed_pseudogene	Gm16232	ENSMUST00000162856	processed_pseudogene		3	-1	152876217	167
ENSMUSG00000038127	protein_coding	Ccdc50	ENSMUST00000039443	protein_coding		16	1	27388980	2192
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225153	protein_coding		19	-1	40513736	3589
ENSMUSG00000057342	protein_coding	Sphk2	ENSMUST00000107737	protein_coding	principal1	7	-1	45718002	3548
ENSMUSG00000085496	lincRNA	4930517E11Rik	ENSMUST00000129584	lincRNA		2	-1	124129956	1457
ENSMUSG00000080695	processed_pseudogene	Gm5394	ENSMUST00000121935	processed_pseudogene		X	-1	121177982	975
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000238831	protein_coding		19	-1	40513736	4342
ENSMUSG00000038127	protein_coding	Ccdc50	ENSMUST00000096127	protein_coding		16	1	27388980	1096
ENSMUSG00000115134	lincRNA	Gm49108	ENSMUST00000227984	lincRNA		14	-1	33807041	737
ENSMUSG00000083668	processed_pseudogene	Gm5648	ENSMUST00000122244	processed_pseudogene		X	-1	121336574	1587
ENSMUSG00000038127	protein_coding	Ccdc50	ENSMUST00000143823	protein_coding		16	1	27389936	767
ENSMUSG00000057342	protein_coding	Sphk2	ENSMUST00000210060	protein_coding	principal1	7	-1	45717902	2577
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225710	protein_coding		19	-1	40311748	529
ENSMUSG00000074182	protein_coding	Znhit6	ENSMUST00000098534	protein_coding	principal3	3	1	145576232	2339
ENSMUSG00000038127	protein_coding	Ccdc50	ENSMUST00000149077	processed_transcript		16	1	27389968	226
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225786	protein_coding		19	-1	40451387	2314
ENSMUSG00000083699	processed_pseudogene	Gm14932	ENSMUST00000117112	processed_pseudogene		X	1	121416143	453
ENSMUSG00000074182	protein_coding	Znhit6	ENSMUST00000200574	protein_coding		3	1	145576247	443
ENSMUSG00000057342	protein_coding	Sphk2	ENSMUST00000072836	protein_coding	principal1	7	-1	45715207	2968
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225306	retained_intron		19	-1	40299826	575
ENSMUSG00000057342	protein_coding	Sphk2	ENSMUST00000211340	protein_coding		7	-1	45713443	395
ENSMUSG00000074182	protein_coding	Znhit6	ENSMUST00000196413	protein_coding		3	1	145576258	805
ENSMUSG00000074182	protein_coding	Znhit6	ENSMUST00000197940	nonsense_mediated_decay		3	1	145576274	498
ENSMUSG00000074182	protein_coding	Znhit6	ENSMUST00000197604	protein_coding		3	1	145576336	602
ENSMUSG00000074182	protein_coding	Znhit6	ENSMUST00000197474	retained_intron		3	1	145595868	534
ENSMUSG00000083711	processed_pseudogene	Gm3931	ENSMUST00000119038	processed_pseudogene		X	1	103319111	455
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000224227	retained_intron		19	-1	40513751	2785
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000226028	retained_intron		19	-1	40340594	3554
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225412	processed_transcript		19	-1	40363265	232
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225628	retained_intron		19	-1	40365174	428
ENSMUSG00000031326	protein_coding	Cdx4	ENSMUST00000033689	protein_coding	principal1	X	1	103321398	1963
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000224583	protein_coding		19	-1	40382831	621
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225766	protein_coding		19	-1	40382633	1057
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225593	processed_transcript		19	-1	40377886	639
ENSMUSG00000081280	processed_pseudogene	Gm9516	ENSMUST00000119684	processed_pseudogene		X	1	103336830	424
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225858	processed_transcript		19	-1	40382865	444
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000224233	protein_coding		19	-1	40487746	888
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000223724	processed_transcript		19	-1	40487555	545
ENSMUSG00000081946	processed_pseudogene	Gm11472	ENSMUST00000121305	processed_pseudogene		2	-1	167087739	556
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225879	processed_transcript		19	-1	40382864	335
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000224646	retained_intron		19	-1	40513779	3263
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000225293	retained_intron		19	-1	40451390	535
ENSMUSG00000033991	protein_coding	Ttc37	ENSMUST00000224386	protein_coding	principal1	13	1	76098734	6976
ENSMUSG00000083436	processed_pseudogene	Gm11471	ENSMUST00000121824	processed_pseudogene		2	1	167093559	198
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000210640	protein_coding	principal1	7	1	45715457	2989
ENSMUSG00000033991	protein_coding	Ttc37	ENSMUST00000224790	protein_coding		13	1	76113569	818
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000211061	protein_coding		7	1	45718099	552
ENSMUSG00000107966	TEC	Gm44001	ENSMUST00000203158	TEC		6	1	88802243	3773
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000209693	protein_coding		7	1	45718112	535
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000209287	protein_coding		7	1	45718157	1027
ENSMUSG00000032297	protein_coding	Celf6	ENSMUST00000143916	nonsense_mediated_decay		9	1	59577917	3087
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000211325	retained_intron		7	1	45719152	502
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000211435	protein_coding		7	1	45719209	402
ENSMUSG00000032332	protein_coding	Col12a1	ENSMUST00000071750	protein_coding	principal1	9	-1	79718518	11511
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000211425	retained_intron		7	1	45719262	834
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000209867	protein_coding		7	1	45719596	254
ENSMUSG00000033991	protein_coding	Ttc37	ENSMUST00000223635	retained_intron		13	1	76124636	582
ENSMUSG00000033991	protein_coding	Ttc37	ENSMUST00000225220	nonsense_mediated_decay		13	1	76127016	674
ENSMUSG00000032332	protein_coding	Col12a1	ENSMUST00000121227	protein_coding		9	-1	79718720	9953
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000209556	protein_coding		7	1	45719621	282
ENSMUSG00000033991	protein_coding	Ttc37	ENSMUST00000224914	retained_intron		13	1	76132275	1764
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000209723	retained_intron		7	1	45720155	450
ENSMUSG00000033991	protein_coding	Ttc37	ENSMUST00000225341	retained_intron		13	1	76137845	3384
ENSMUSG00000033991	protein_coding	Ttc37	ENSMUST00000224289	retained_intron		13	1	76148448	781
ENSMUSG00000071037	protein_coding	Camkmt	ENSMUST00000095188	protein_coding	principal1	17	1	85090552	1595
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000099466	protein_coding	principal2	19	-1	40402267	2223
ENSMUSG00000033991	protein_coding	Ttc37	ENSMUST00000223902	processed_transcript		13	1	76180425	2116
ENSMUSG00000032332	protein_coding	Col12a1	ENSMUST00000150289	retained_intron		9	-1	79718720	3179
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000165469	protein_coding		19	-1	40402267	2145
ENSMUSG00000033991	protein_coding	Ttc37	ENSMUST00000225147	protein_coding		13	1	76185127	549
ENSMUSG00000059070	protein_coding	Rpl18	ENSMUST00000072503	protein_coding	principal1	7	1	45718071	679
ENSMUSG00000032332	protein_coding	Col12a1	ENSMUST00000122827	retained_intron		9	-1	79718831	3351
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000099467	protein_coding		19	-1	40402267	2817
ENSMUSG00000033991	protein_coding	Ttc37	ENSMUST00000091466	protein_coding	principal1	13	1	76098734	5381
ENSMUSG00000032332	protein_coding	Col12a1	ENSMUST00000141667	retained_intron		9	-1	79718494	432
ENSMUSG00000039795	protein_coding	Zfand1	ENSMUST00000037839	protein_coding	principal1	3	-1	10351317	1610
ENSMUSG00000025006	protein_coding	Sorbs1	ENSMUST00000165212	protein_coding		19	-1	40402267	2175
ENSMUSG00000071037	protein_coding	Camkmt	ENSMUST00000234822	processed_transcript		17	1	85090606	741
ENSMUSG00000040373	protein_coding	Cacng5	ENSMUST00000039071	protein_coding	principal1	11	-1	107915055	3705
ENSMUSG00000071037	protein_coding	Camkmt	ENSMUST00000234501	processed_transcript		17	1	85092083	2512
ENSMUSG00000116131	processed_pseudogene	Gm49506	ENSMUST00000230522	processed_pseudogene		15	-1	97558290	500
ENSMUSG00000039795	protein_coding	Zfand1	ENSMUST00000125734	retained_intron		3	-1	10344727	4685
ENSMUSG00000039795	protein_coding	Zfand1	ENSMUST00000108377	protein_coding		3	-1	10351313	936
ENSMUSG00000113422	processed_pseudogene	Gm47556	ENSMUST00000221469	processed_pseudogene		12	-1	71768000	698
ENSMUSG00000040373	protein_coding	Cacng5	ENSMUST00000106742	protein_coding	principal1	11	-1	107911362	3678
ENSMUSG00000107661	processed_pseudogene	Gm18402	ENSMUST00000203834	processed_pseudogene		6	-1	72983062	586
ENSMUSG00000039795	protein_coding	Zfand1	ENSMUST00000184644	nonsense_mediated_decay		3	-1	10351317	954
ENSMUSG00000039795	protein_coding	Zfand1	ENSMUST00000140634	protein_coding		3	-1	10348625	743
ENSMUSG00000039795	protein_coding	Zfand1	ENSMUST00000156414	retained_intron		3	-1	10346211	542
ENSMUSG00000115751	lincRNA	4930503F20Rik	ENSMUST00000228030	lincRNA		14	-1	33811283	664
ENSMUSG00000097953	antisense	Gm26952	ENSMUST00000181996	antisense		X	-1	103383169	409
ENSMUSG00000039795	protein_coding	Zfand1	ENSMUST00000183798	processed_transcript		3	-1	10351314	586
ENSMUSG00000115751	lincRNA	4930503F20Rik	ENSMUST00000226156	lincRNA		14	-1	33811283	574
ENSMUSG00000039795	protein_coding	Zfand1	ENSMUST00000127313	processed_transcript		3	-1	10351316	715
ENSMUSG00000021943	protein_coding	Gdf10	ENSMUST00000168727	protein_coding	principal1	14	1	33923587	5210
ENSMUSG00000023977	protein_coding	Ubr2	ENSMUST00000113337	protein_coding	principal3	17	-1	47010520	7633
ENSMUSG00000023977	protein_coding	Ubr2	ENSMUST00000224442	retained_intron		17	-1	46933075	588
ENSMUSG00000097918	protein_coding	Ascl5	ENSMUST00000180436	protein_coding	principal1	1	1	136050804	567
ENSMUSG00000031327	protein_coding	Chic1	ENSMUST00000116547	protein_coding	principal1	X	1	103356476	7375
ENSMUSG00000022466	protein_coding	Rpap3	ENSMUST00000023104	protein_coding	principal1	15	-1	97705825	2271
ENSMUSG00000117925	processed_pseudogene	Gm50127	ENSMUST00000236191	processed_pseudogene		17	-1	32183337	344
ENSMUSG00000022466	protein_coding	Rpap3	ENSMUST00000229109	retained_intron		15	-1	97680353	811
ENSMUSG00000022466	protein_coding	Rpap3	ENSMUST00000229008	retained_intron		15	-1	97682199	724
ENSMUSG00000023977	protein_coding	Ubr2	ENSMUST00000224759	retained_intron		17	-1	47010479	6521
ENSMUSG00000089773	protein_coding	Skint1	ENSMUST00000162885	protein_coding		4	1	112006269	603
ENSMUSG00000023977	protein_coding	Ubr2	ENSMUST00000113335	protein_coding	alternative2	17	-1	47010532	5691
ENSMUSG00000023977	protein_coding	Ubr2	ENSMUST00000225712	retained_intron		17	-1	46941411	455
ENSMUSG00000023977	protein_coding	Ubr2	ENSMUST00000223860	retained_intron		17	-1	46945369	747
ENSMUSG00000035459	protein_coding	Stab2	ENSMUST00000035288	protein_coding	principal1	10	-1	87008025	8228
ENSMUSG00000023977	protein_coding	Ubr2	ENSMUST00000225751	retained_intron		17	-1	46952155	381
ENSMUSG00000023977	protein_coding	Ubr2	ENSMUST00000225599	nonsense_mediated_decay		17	-1	47010556	3625
ENSMUSG00000035459	protein_coding	Stab2	ENSMUST00000219341	nonsense_mediated_decay		10	-1	86890805	3502
ENSMUSG00000082336	processed_pseudogene	Gm8401	ENSMUST00000120248	processed_pseudogene		X	1	70517777	1739
ENSMUSG00000035459	protein_coding	Stab2	ENSMUST00000219612	retained_intron		10	-1	86878958	502
ENSMUSG00000035459	protein_coding	Stab2	ENSMUST00000219659	retained_intron		10	-1	86885749	442
ENSMUSG00000080843	unprocessed_pseudogene	Gm14726	ENSMUST00000120623	unprocessed_pseudogene		X	1	70536280	896
ENSMUSG00000089773	protein_coding	Skint1	ENSMUST00000117379	protein_coding	alternative2	4	1	112006269	875
ENSMUSG00000089773	protein_coding	Skint1	ENSMUST00000161389	protein_coding	alternative2	4	1	112006269	960
ENSMUSG00000035459	protein_coding	Stab2	ENSMUST00000218408	processed_transcript		10	-1	86940640	1237
ENSMUSG00000083119	processed_pseudogene	Gm14724	ENSMUST00000118400	processed_pseudogene		X	-1	70539846	537
ENSMUSG00000085151	processed_transcript	1110018N20Rik	ENSMUST00000147446	processed_transcript		2	1	167189661	1162
ENSMUSG00000085151	processed_transcript	1110018N20Rik	ENSMUST00000138928	processed_transcript		2	1	167189107	996
ENSMUSG00000035459	protein_coding	Stab2	ENSMUST00000219280	processed_transcript		10	-1	87008012	523
ENSMUSG00000089773	protein_coding	Skint1	ENSMUST00000162158	protein_coding	principal2	4	1	112006269	1260
ENSMUSG00000082652	unprocessed_pseudogene	Gm14725	ENSMUST00000120324	unprocessed_pseudogene		X	1	70545558	828
ENSMUSG00000032267	protein_coding	Usp28	ENSMUST00000213874	protein_coding	alternative2	9	1	48985414	4109
ENSMUSG00000035459	protein_coding	Stab2	ENSMUST00000218366	processed_transcript		10	-1	87008022	720
ENSMUSG00000085151	processed_transcript	1110018N20Rik	ENSMUST00000151217	processed_transcript		2	1	167188702	800
ENSMUSG00000109539	TEC	Gm44667	ENSMUST00000207632	TEC		7	-1	67272242	3337
ENSMUSG00000089775	transcribed_processed_pseudogene	Gm16270	ENSMUST00000160327	transcribed_processed_pseudogene		10	1	86909479	3238
ENSMUSG00000038884	protein_coding	Shfl	ENSMUST00000043911	protein_coding	principal1	9	1	20868642	1683
ENSMUSG00000082083	unprocessed_pseudogene	Gm14728	ENSMUST00000122196	unprocessed_pseudogene		X	-1	70564609	492
ENSMUSG00000089773	protein_coding	Skint1	ENSMUST00000143802	retained_intron		4	1	112006282	1735
ENSMUSG00000089959	antisense	Gm16268	ENSMUST00000159445	antisense		10	1	86839094	1157
ENSMUSG00000081464	processed_pseudogene	Gm14732	ENSMUST00000121372	processed_pseudogene		X	-1	70600807	545
ENSMUSG00000050556	protein_coding	Kcnb1	ENSMUST00000207917	protein_coding	principal1	2	-1	167188818	11153
ENSMUSG00000032267	protein_coding	Usp28	ENSMUST00000047349	protein_coding	principal2	9	1	48985465	4133
ENSMUSG00000038884	protein_coding	Shfl	ENSMUST00000175820	retained_intron		9	1	20868658	3210
ENSMUSG00000050556	protein_coding	Kcnb1	ENSMUST00000144351	processed_transcript		2	-1	167101826	1894
ENSMUSG00000032267	protein_coding	Usp28	ENSMUST00000215856	protein_coding		9	1	49016751	3065
ENSMUSG00000038884	protein_coding	Shfl	ENSMUST00000176142	processed_transcript		9	1	20868680	765
ENSMUSG00000050556	protein_coding	Kcnb1	ENSMUST00000148226	processed_transcript		2	-1	167101170	1119
ENSMUSG00000032267	protein_coding	Usp28	ENSMUST00000215378	retained_intron		9	1	49018285	363
ENSMUSG00000038884	protein_coding	Shfl	ENSMUST00000177067	retained_intron		9	1	20869277	1043
ENSMUSG00000075081	protein_coding	Olfr1247	ENSMUST00000111532	protein_coding	principal1	2	-1	89614119	6070
ENSMUSG00000038884	protein_coding	Shfl	ENSMUST00000176990	retained_intron		9	1	20870772	868
ENSMUSG00000032267	protein_coding	Usp28	ENSMUST00000215850	retained_intron		9	1	49023678	535
ENSMUSG00000050556	protein_coding	Kcnb1	ENSMUST00000059826	protein_coding	principal1	2	-1	167190155	4015
ENSMUSG00000090667	protein_coding	Gm765	ENSMUST00000164491	protein_coding	principal1	6	-1	98342754	3132
ENSMUSG00000032267	protein_coding	Usp28	ENSMUST00000215118	retained_intron		9	1	49032214	732
ENSMUSG00000032267	protein_coding	Usp28	ENSMUST00000213457	retained_intron		9	1	49033220	634
ENSMUSG00000075081	protein_coding	Olfr1247	ENSMUST00000216424	protein_coding	principal1	2	-1	89614130	2164
ENSMUSG00000086098	antisense	Gm14291	ENSMUST00000143645	antisense		2	1	167201576	804
ENSMUSG00000032267	protein_coding	Usp28	ENSMUST00000216657	retained_intron		9	1	49037676	392
ENSMUSG00000090667	protein_coding	Gm765	ENSMUST00000204914	retained_intron		6	-1	98342659	624
ENSMUSG00000075081	protein_coding	Olfr1247	ENSMUST00000099771	protein_coding	principal1	2	-1	89610100	945
ENSMUSG00000086624	antisense	Gm16130	ENSMUST00000153106	antisense		9	1	58032274	2799
ENSMUSG00000085753	antisense	Gm16131	ENSMUST00000131007	antisense		9	1	58117815	659
ENSMUSG00000107902	antisense	Gm32592	ENSMUST00000205146	antisense		6	1	98121796	3124
ENSMUSG00000043831	protein_coding	Lysmd4	ENSMUST00000208512	nonsense_mediated_decay		7	1	67222544	659
ENSMUSG00000083430	processed_pseudogene	Gm13006	ENSMUST00000118683	processed_pseudogene		4	-1	135891477	214
ENSMUSG00000038742	protein_coding	Angptl6	ENSMUST00000043726	protein_coding	principal1	9	-1	20879727	1582
ENSMUSG00000043831	protein_coding	Lysmd4	ENSMUST00000208213	nonsense_mediated_decay		7	1	67222579	3060
ENSMUSG00000043831	protein_coding	Lysmd4	ENSMUST00000207757	protein_coding	alternative2	7	1	67222596	631
ENSMUSG00000107929	lincRNA	4930595L18Rik	ENSMUST00000204069	lincRNA		6	-1	98552107	506
ENSMUSG00000022180	protein_coding	Slc7a8	ENSMUST00000022787	protein_coding	principal1	14	-1	54781930	4084
ENSMUSG00000043831	protein_coding	Lysmd4	ENSMUST00000058771	protein_coding	principal2	7	1	67222608	2898
ENSMUSG00000072625	protein_coding	Gdf2	ENSMUST00000100720	protein_coding	principal1	14	1	33941039	2988
ENSMUSG00000107614	lincRNA	Gm44196	ENSMUST00000204186	lincRNA		6	-1	98697625	812
ENSMUSG00000107614	lincRNA	Gm44196	ENSMUST00000203852	lincRNA		6	-1	98697644	555
ENSMUSG00000022180	protein_coding	Slc7a8	ENSMUST00000226646	retained_intron		14	-1	54781946	2155
ENSMUSG00000033006	protein_coding	Sox10	ENSMUST00000230532	protein_coding	principal1	15	-1	79165240	2780
ENSMUSG00000107614	lincRNA	Gm44196	ENSMUST00000204359	lincRNA		6	-1	98697674	1190
ENSMUSG00000043831	protein_coding	Lysmd4	ENSMUST00000207823	protein_coding	alternative2	7	1	67222610	3772
ENSMUSG00000043831	protein_coding	Lysmd4	ENSMUST00000208698	protein_coding	alternative2	7	1	67222614	551
ENSMUSG00000033006	protein_coding	Sox10	ENSMUST00000230261	protein_coding		15	-1	79164474	863
ENSMUSG00000082822	processed_pseudogene	Gm14731	ENSMUST00000119216	processed_pseudogene		X	-1	70626730	376
ENSMUSG00000033006	protein_coding	Sox10	ENSMUST00000230891	retained_intron		15	-1	79164486	982
ENSMUSG00000043831	protein_coding	Lysmd4	ENSMUST00000208998	protein_coding	principal2	7	1	67222616	2110
ENSMUSG00000084185	processed_pseudogene	Rplp1-ps1	ENSMUST00000119410	processed_pseudogene		X	-1	70653550	345
ENSMUSG00000033006	protein_coding	Sox10	ENSMUST00000040019	protein_coding	principal1	15	-1	79164490	2713
ENSMUSG00000043831	protein_coding	Lysmd4	ENSMUST00000179106	protein_coding	alternative2	7	1	67222629	3319
ENSMUSG00000083406	processed_pseudogene	Gm8410	ENSMUST00000117225	processed_pseudogene		X	1	70770867	605
ENSMUSG00000043831	protein_coding	Lysmd4	ENSMUST00000208569	processed_transcript		7	1	67223609	641
ENSMUSG00000115626	processed_pseudogene	Gm17772	ENSMUST00000227919	processed_pseudogene		14	-1	54806096	351
ENSMUSG00000083157	processed_pseudogene	Gm13511	ENSMUST00000121167	processed_pseudogene		2	-1	39217294	363
ENSMUSG00000080938	processed_pseudogene	Gm6062	ENSMUST00000120462	processed_pseudogene		X	1	70978281	631
ENSMUSG00000017969	protein_coding	Ptgis	ENSMUST00000018113	protein_coding	principal1	2	-1	167240604	2107
ENSMUSG00000017969	protein_coding	Ptgis	ENSMUST00000088041	protein_coding		2	-1	167240589	1711
ENSMUSG00000017969	protein_coding	Ptgis	ENSMUST00000136271	retained_intron		2	-1	167208416	600
ENSMUSG00000052861	protein_coding	Dnah6	ENSMUST00000114040	protein_coding	alternative2	6	-1	73221651	12513
ENSMUSG00000032105	protein_coding	Pdzd3	ENSMUST00000034618	protein_coding	principal1	9	-1	44251471	2193
ENSMUSG00000052861	protein_coding	Dnah6	ENSMUST00000204053	protein_coding	principal2	6	-1	73212663	12435
ENSMUSG00000033174	protein_coding	Mgll	ENSMUST00000113585	protein_coding	principal1	6	1	88724412	3676
ENSMUSG00000032105	protein_coding	Pdzd3	ENSMUST00000213186	processed_transcript		9	-1	44249936	433
ENSMUSG00000029427	protein_coding	Zcchc8	ENSMUST00000196282	protein_coding	principal1	5	-1	123721100	4350
ENSMUSG00000033174	protein_coding	Mgll	ENSMUST00000151699	processed_transcript		6	1	88724470	443
ENSMUSG00000037577	protein_coding	Ephx3	ENSMUST00000087721	protein_coding	principal3	17	-1	32189463	2416
ENSMUSG00000029427	protein_coding	Zcchc8	ENSMUST00000199875	retained_intron		5	-1	123703418	1868
ENSMUSG00000052861	protein_coding	Dnah6	ENSMUST00000114038	retained_intron		6	-1	73139005	4387
ENSMUSG00000037577	protein_coding	Ephx3	ENSMUST00000162117	protein_coding	alternative2	17	-1	32189549	1591
ENSMUSG00000052861	protein_coding	Dnah6	ENSMUST00000064948	protein_coding	principal2	6	-1	73221631	12652
ENSMUSG00000029427	protein_coding	Zcchc8	ENSMUST00000198826	nonsense_mediated_decay		5	-1	123719515	751
ENSMUSG00000022868	protein_coding	Ahsg	ENSMUST00000231848	protein_coding	alternative2	16	1	22891277	1370
ENSMUSG00000029427	protein_coding	Zcchc8	ENSMUST00000196042	retained_intron		5	-1	123708482	738
ENSMUSG00000029427	protein_coding	Zcchc8	ENSMUST00000200161	protein_coding		5	-1	123714081	531
ENSMUSG00000022868	protein_coding	Ahsg	ENSMUST00000231328	protein_coding	alternative2	16	1	22891399	1291
ENSMUSG00000107546	antisense	Gm20560	ENSMUST00000204577	antisense		6	1	73012043	3513
ENSMUSG00000033174	protein_coding	Mgll	ENSMUST00000113582	protein_coding		6	1	88724470	1034
ENSMUSG00000029427	protein_coding	Zcchc8	ENSMUST00000196333	nonsense_mediated_decay		5	-1	123720823	690
ENSMUSG00000026753	protein_coding	Ppp6c	ENSMUST00000028087	protein_coding	principal1	2	-1	39226451	4115
ENSMUSG00000029427	protein_coding	Zcchc8	ENSMUST00000196001	nonsense_mediated_decay		5	-1	123720862	506
ENSMUSG00000026753	protein_coding	Ppp6c	ENSMUST00000204257	nonsense_mediated_decay		2	-1	39226282	1358
ENSMUSG00000029427	protein_coding	Zcchc8	ENSMUST00000200503	protein_coding		5	-1	123720774	321
ENSMUSG00000033174	protein_coding	Mgll	ENSMUST00000203608	nonsense_mediated_decay		6	1	88724481	767
ENSMUSG00000026753	protein_coding	Ppp6c	ENSMUST00000204701	protein_coding		2	-1	39226320	1495
ENSMUSG00000022868	protein_coding	Ahsg	ENSMUST00000023583	protein_coding	principal2	16	1	22892037	1484
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000205679	protein_coding		16	1	18426384	1866
ENSMUSG00000026753	protein_coding	Ppp6c	ENSMUST00000143733	processed_transcript		2	-1	39200990	487
ENSMUSG00000033174	protein_coding	Mgll	ENSMUST00000113581	protein_coding		6	1	88724494	1308
ENSMUSG00000022868	protein_coding	Ahsg	ENSMUST00000232098	protein_coding	alternative2	16	1	22892039	1333
ENSMUSG00000026753	protein_coding	Ppp6c	ENSMUST00000204368	protein_coding		2	-1	39226032	635
ENSMUSG00000029427	protein_coding	Zcchc8	ENSMUST00000031376	protein_coding	principal1	5	-1	123721044	4286
ENSMUSG00000033174	protein_coding	Mgll	ENSMUST00000150180	protein_coding		6	1	88724596	1312
ENSMUSG00000022868	protein_coding	Ahsg	ENSMUST00000231932	nonsense_mediated_decay		16	1	22892045	848
ENSMUSG00000033174	protein_coding	Mgll	ENSMUST00000089449	protein_coding	principal1	6	1	88724828	3867
ENSMUSG00000107938	processed_pseudogene	Gm32308	ENSMUST00000203053	processed_pseudogene		6	1	98757749	280
ENSMUSG00000116926	processed_pseudogene	Gm18234	ENSMUST00000232583	processed_pseudogene		16	-1	27844412	1051
ENSMUSG00000022868	protein_coding	Ahsg	ENSMUST00000232556	processed_transcript		16	1	22892407	1336
ENSMUSG00000033174	protein_coding	Mgll	ENSMUST00000203824	nonsense_mediated_decay		6	1	88725077	1025
ENSMUSG00000116654	lincRNA	Gm10823	ENSMUST00000231532	lincRNA		16	1	27849930	815
ENSMUSG00000032297	protein_coding	Celf6	ENSMUST00000118549	protein_coding	principal1	9	1	59578192	2973
ENSMUSG00000022868	protein_coding	Ahsg	ENSMUST00000232377	retained_intron		16	1	22894759	785
ENSMUSG00000022868	protein_coding	Ahsg	ENSMUST00000232674	protein_coding		16	1	22894864	559
ENSMUSG00000033174	protein_coding	Mgll	ENSMUST00000205045	retained_intron		6	1	88823130	460
ENSMUSG00000032297	protein_coding	Celf6	ENSMUST00000129357	nonsense_mediated_decay		9	1	59578192	2924
ENSMUSG00000116978	processed_pseudogene	Gm49765	ENSMUST00000231476	processed_pseudogene		16	-1	27970345	317
ENSMUSG00000042156	protein_coding	Dzip1	ENSMUST00000004055	protein_coding	principal1	14	-1	118925387	4079
ENSMUSG00000032297	protein_coding	Celf6	ENSMUST00000034840	protein_coding		9	1	59578337	2765
ENSMUSG00000116831	antisense	Gm30505	ENSMUST00000231692	antisense		16	-1	22894386	1769
ENSMUSG00000032297	protein_coding	Celf6	ENSMUST00000121266	protein_coding		9	1	59589288	2610
ENSMUSG00000032297	protein_coding	Celf6	ENSMUST00000118164	protein_coding		9	1	59589339	1583
ENSMUSG00000032297	protein_coding	Celf6	ENSMUST00000146503	retained_intron		9	1	59602658	449
ENSMUSG00000059401	protein_coding	Mamld1	ENSMUST00000239162	protein_coding	alternative2	X	1	71050240	3342
ENSMUSG00000032297	protein_coding	Celf6	ENSMUST00000129728	retained_intron		9	1	59604033	591
ENSMUSG00000022468	protein_coding	Endou	ENSMUST00000023105	protein_coding	principal3	15	-1	97721150	2408
ENSMUSG00000022468	protein_coding	Endou	ENSMUST00000230430	nonsense_mediated_decay		15	-1	97721162	1668
ENSMUSG00000042156	protein_coding	Dzip1	ENSMUST00000228157	retained_intron		14	-1	118923023	4577
ENSMUSG00000033174	protein_coding	Mgll	ENSMUST00000163271	protein_coding		6	1	88724704	3991
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000156690	protein_coding		7	-1	67372858	5538
ENSMUSG00000042156	protein_coding	Dzip1	ENSMUST00000227344	retained_intron		14	-1	118913155	4226
ENSMUSG00000107624	TEC	Gm44005	ENSMUST00000203186	TEC		6	1	88738192	3173
ENSMUSG00000042156	protein_coding	Dzip1	ENSMUST00000228687	retained_intron		14	-1	118883748	1146
ENSMUSG00000042156	protein_coding	Dzip1	ENSMUST00000228861	retained_intron		14	-1	118889663	734
ENSMUSG00000107835	TEC	Gm43999	ENSMUST00000204286	TEC		6	1	88742727	2889
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000107476	protein_coding		7	-1	67372858	4759
ENSMUSG00000022468	protein_coding	Endou	ENSMUST00000100249	protein_coding	alternative2	15	-1	97731339	1467
ENSMUSG00000042156	protein_coding	Dzip1	ENSMUST00000226960	retained_intron		14	-1	118913750	2047
ENSMUSG00000107719	TEC	Gm43937	ENSMUST00000204640	TEC		6	-1	88787451	3122
ENSMUSG00000042156	protein_coding	Dzip1	ENSMUST00000228540	retained_intron		14	-1	118900202	436
ENSMUSG00000042156	protein_coding	Dzip1	ENSMUST00000228142	processed_transcript		14	-1	118916720	923
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000135493	nonsense_mediated_decay		7	-1	67316920	1828
ENSMUSG00000097730	antisense	Gm26588	ENSMUST00000181355	antisense		6	-1	88725860	2538
ENSMUSG00000042156	protein_coding	Dzip1	ENSMUST00000226919	processed_transcript		14	-1	118925460	729
ENSMUSG00000097730	antisense	Gm26588	ENSMUST00000181064	antisense		6	-1	88724501	2098
ENSMUSG00000042156	protein_coding	Dzip1	ENSMUST00000047208	protein_coding	principal1	14	-1	118923167	4476
ENSMUSG00000115718	antisense	Gm49179	ENSMUST00000226752	antisense		14	1	118875882	4979
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000207794	retained_intron		7	-1	67268714	2766
ENSMUSG00000112168	lincRNA	Gm34776	ENSMUST00000219415	lincRNA		10	-1	72949792	1140
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000076325	protein_coding	principal1	7	-1	67372858	2664
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000072460	nonsense_mediated_decay		7	-1	67372858	2677
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000032776	protein_coding	principal1	7	-1	67372858	2476
ENSMUSG00000111994	lincRNA	A330049N07Rik	ENSMUST00000220010	lincRNA		10	-1	73086705	1989
ENSMUSG00000027331	protein_coding	Knstrn	ENSMUST00000134661	protein_coding	principal2	2	1	118814003	4602
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000207715	protein_coding		7	-1	67266162	631
ENSMUSG00000032330	protein_coding	Cox7a2	ENSMUST00000034881	protein_coding	principal1	9	-1	79759878	659
ENSMUSG00000111994	lincRNA	A330049N07Rik	ENSMUST00000219536	lincRNA		10	-1	73086699	519
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000206606	protein_coding		16	1	18426417	1809
ENSMUSG00000111994	lincRNA	A330049N07Rik	ENSMUST00000219920	lincRNA		10	-1	73086699	587
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000133074	protein_coding		7	-1	67372858	1062
ENSMUSG00000032330	protein_coding	Cox7a2	ENSMUST00000215933	processed_transcript		9	-1	79759251	477
ENSMUSG00000059401	protein_coding	Mamld1	ENSMUST00000082088	protein_coding	principal4	X	1	71050256	4796
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000115606	protein_coding	principal2	16	1	18426417	1905
ENSMUSG00000032330	protein_coding	Cox7a2	ENSMUST00000215452	retained_intron		9	-1	79759710	344
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000207486	retained_intron		7	-1	67316965	625
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000208823	retained_intron		7	-1	67293649	4259
ENSMUSG00000030557	protein_coding	Mef2a	ENSMUST00000144057	retained_intron		7	-1	67372827	4445
ENSMUSG00000109363	TEC	Gm44668	ENSMUST00000207911	TEC		7	-1	67370980	3265
ENSMUSG00000004460	protein_coding	Dnajb11	ENSMUST00000004574	protein_coding	principal1	16	1	22857845	1927
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000115604	protein_coding		16	1	18426438	1235
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000115605	nonsense_mediated_decay		16	1	18426441	1800
ENSMUSG00000059401	protein_coding	Mamld1	ENSMUST00000114629	protein_coding	alternative2	X	1	71050256	3346
ENSMUSG00000027331	protein_coding	Knstrn	ENSMUST00000177103	nonsense_mediated_decay		2	1	118814232	683
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000206151	protein_coding	principal2	16	1	18426445	2874
ENSMUSG00000027331	protein_coding	Knstrn	ENSMUST00000134579	nonsense_mediated_decay		2	1	118814232	799
ENSMUSG00000025905	protein_coding	Oprk1	ENSMUST00000192685	retained_intron		1	1	5588466	2846
ENSMUSG00000027331	protein_coding	Knstrn	ENSMUST00000110842	protein_coding	alternative2	2	1	118814233	925
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000131303	protein_coding		16	1	18426462	532
ENSMUSG00000004460	protein_coding	Dnajb11	ENSMUST00000166487	protein_coding	principal1	16	1	22857866	2513
ENSMUSG00000027331	protein_coding	Knstrn	ENSMUST00000028803	protein_coding		2	1	118814254	1241
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000126778	protein_coding		16	1	18428697	491
ENSMUSG00000027331	protein_coding	Knstrn	ENSMUST00000126045	protein_coding	alternative2	2	1	118814277	653
ENSMUSG00000004460	protein_coding	Dnajb11	ENSMUST00000133013	protein_coding		16	1	22869427	579
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000144233	protein_coding		16	1	18428925	593
ENSMUSG00000027331	protein_coding	Knstrn	ENSMUST00000123104	nonsense_mediated_decay		2	1	118814296	839
ENSMUSG00000004460	protein_coding	Dnajb11	ENSMUST00000178320	protein_coding	principal1	16	1	22857845	1628
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000138310	protein_coding		16	1	18440801	640
ENSMUSG00000027331	protein_coding	Knstrn	ENSMUST00000176463	nonsense_mediated_decay		2	1	118831583	495
ENSMUSG00000027331	protein_coding	Knstrn	ENSMUST00000148877	nonsense_mediated_decay		2	1	118834075	452
ENSMUSG00000111239	protein_coding	Olfr1248	ENSMUST00000216129	protein_coding	principal1	2	-1	89618245	1078
ENSMUSG00000086421	antisense	Gm14091	ENSMUST00000133534	antisense		2	-1	118834122	874
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000149937	processed_transcript		16	1	18452039	720
ENSMUSG00000025905	protein_coding	Oprk1	ENSMUST00000160777	protein_coding	principal1	1	1	5588493	4675
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000153457	processed_transcript		16	1	18452045	648
ENSMUSG00000025905	protein_coding	Oprk1	ENSMUST00000239100	protein_coding		1	1	5588493	4675
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000126330	processed_transcript		16	1	18471821	266
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000156604	processed_transcript		16	1	18471851	403
ENSMUSG00000032328	protein_coding	Tmem30a	ENSMUST00000034878	protein_coding	principal1	9	-1	79793430	3658
ENSMUSG00000075079	protein_coding	Olfr1249	ENSMUST00000216124	protein_coding	principal1	2	-1	89634983	3047
ENSMUSG00000057156	protein_coding	Homez	ENSMUST00000081162	protein_coding	principal1	14	-1	54860490	5609
ENSMUSG00000027534	protein_coding	Snx16	ENSMUST00000099223	protein_coding	alternative2	3	-1	10440102	2512
ENSMUSG00000075079	protein_coding	Olfr1249	ENSMUST00000099769	protein_coding	principal1	2	-1	89630896	957
ENSMUSG00000032328	protein_coding	Tmem30a	ENSMUST00000120690	protein_coding		9	-1	79793507	3627
ENSMUSG00000025905	protein_coding	Oprk1	ENSMUST00000027038	protein_coding	principal1	1	1	5588557	1376
ENSMUSG00000057156	protein_coding	Homez	ENSMUST00000142283	protein_coding	principal1	14	-1	54864158	4713
ENSMUSG00000025905	protein_coding	Oprk1	ENSMUST00000160339	protein_coding	principal1	1	1	5588941	2481
ENSMUSG00000032328	protein_coding	Tmem30a	ENSMUST00000153815	retained_intron		9	-1	79793430	2662
ENSMUSG00000027534	protein_coding	Snx16	ENSMUST00000029047	protein_coding	principal3	3	-1	10440087	2288
ENSMUSG00000057156	protein_coding	Homez	ENSMUST00000176259	protein_coding		14	-1	54857196	597
ENSMUSG00000025905	protein_coding	Oprk1	ENSMUST00000159083	retained_intron		1	1	5596518	3327
ENSMUSG00000032328	protein_coding	Tmem30a	ENSMUST00000130419	retained_intron		9	-1	79793430	1043
ENSMUSG00000027534	protein_coding	Snx16	ENSMUST00000195822	protein_coding		3	-1	10440100	1084
ENSMUSG00000057156	protein_coding	Homez	ENSMUST00000146642	protein_coding		14	-1	54870961	454
ENSMUSG00000086918	lincRNA	4930429F24Rik	ENSMUST00000151676	lincRNA		9	1	79793641	1520
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000177856	protein_coding	alternative2	16	1	18426438	1878
ENSMUSG00000075704	protein_coding	Txnrd2	ENSMUST00000178093	protein_coding		16	1	18426438	1785
ENSMUSG00000087556	processed_transcript	Gm15764	ENSMUST00000150389	antisense		16	1	18416682	672
ENSMUSG00000087556	processed_transcript	Gm15764	ENSMUST00000155103	retained_intron		16	1	18416885	230
ENSMUSG00000027536	protein_coding	Chmp4c	ENSMUST00000029049	protein_coding	principal1	3	1	10366907	6188
ENSMUSG00000035246	protein_coding	Pcyt1b	ENSMUST00000045898	protein_coding	principal1	X	1	93675102	4888
ENSMUSG00000062585	protein_coding	Cnr2	ENSMUST00000097843	protein_coding	principal1	4	1	135895394	3867
ENSMUSG00000027536	protein_coding	Chmp4c	ENSMUST00000191826	nonsense_mediated_decay		3	1	10366958	4163
ENSMUSG00000035246	protein_coding	Pcyt1b	ENSMUST00000146263	processed_transcript		X	1	93731562	350
ENSMUSG00000035246	protein_coding	Pcyt1b	ENSMUST00000113933	protein_coding		X	1	93654863	4867
ENSMUSG00000062585	protein_coding	Cnr2	ENSMUST00000068830	protein_coding	principal1	4	1	135911818	3756
ENSMUSG00000112858	protein_coding	Rnf212b	ENSMUST00000219350	nonsense_mediated_decay		14	1	54814141	1233
ENSMUSG00000034007	protein_coding	Scaper	ENSMUST00000214747	protein_coding	alternative2	9	-1	55938101	5231
ENSMUSG00000092565	processed_pseudogene	Gm20477	ENSMUST00000174028	processed_pseudogene		9	-1	79838387	280
ENSMUSG00000034007	protein_coding	Scaper	ENSMUST00000216595	protein_coding		9	-1	55938119	2911
ENSMUSG00000112858	protein_coding	Rnf212b	ENSMUST00000218311	protein_coding	principal1	14	1	54814141	1201
ENSMUSG00000034007	protein_coding	Scaper	ENSMUST00000217647	protein_coding	principal2	9	-1	55938110	4370
ENSMUSG00000112858	protein_coding	Rnf212b	ENSMUST00000220403	nonsense_mediated_decay		14	1	54814150	1092
ENSMUSG00000034007	protein_coding	Scaper	ENSMUST00000215323	processed_transcript		9	-1	55792310	387
ENSMUSG00000112858	protein_coding	Rnf212b	ENSMUST00000220122	nonsense_mediated_decay		14	1	54814194	1095
ENSMUSG00000112858	protein_coding	Rnf212b	ENSMUST00000220208	nonsense_mediated_decay		14	1	54815787	1719
ENSMUSG00000034007	protein_coding	Scaper	ENSMUST00000037408	protein_coding	principal2	9	-1	55919605	5158
ENSMUSG00000112858	protein_coding	Rnf212b	ENSMUST00000219519	nonsense_mediated_decay		14	1	54820138	1317
ENSMUSG00000112858	protein_coding	Rnf212b	ENSMUST00000219496	nonsense_mediated_decay		14	1	54838127	1143
ENSMUSG00000086420	processed_pseudogene	Gm8865	ENSMUST00000125697	processed_pseudogene		14	-1	54826676	430
ENSMUSG00000109940	TEC	Gm45399	ENSMUST00000209955	TEC		7	1	102458245	1016
ENSMUSG00000082262	processed_pseudogene	Gm14730	ENSMUST00000122378	processed_pseudogene		X	1	71197127	1045
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000174302	protein_coding	principal3	11	-1	102319096	4692
ENSMUSG00000037716	protein_coding	Ccdc33	ENSMUST00000042205	protein_coding	principal3	9	-1	58102297	2632
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000079589	protein_coding	principal3	11	-1	102316680	3286
ENSMUSG00000028195	protein_coding	Ccn1	ENSMUST00000029846	protein_coding	principal1	3	-1	145649981	2019
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000107115	protein_coding	alternative2	11	-1	102316704	3199
ENSMUSG00000091775	processed_pseudogene	Gm16494	ENSMUST00000165525	processed_pseudogene		17	-1	47016955	259
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000107117	protein_coding	alternative2	11	-1	102317871	3258
ENSMUSG00000062472	processed_pseudogene	Gm4945	ENSMUST00000075152	processed_pseudogene		17	-1	47043039	453
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000006754	protein_coding	alternative2	11	-1	102319096	3213
ENSMUSG00000001670	protein_coding	Tat	ENSMUST00000001720	protein_coding	principal1	8	1	109990437	2375
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000107119	protein_coding	alternative2	11	-1	102317287	3013
ENSMUSG00000001670	protein_coding	Tat	ENSMUST00000143741	protein_coding		8	1	109990506	758
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000107123	protein_coding	principal3	11	-1	102317635	2759
ENSMUSG00000037716	protein_coding	Ccdc33	ENSMUST00000098682	protein_coding	alternative2	9	-1	58118823	3117
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000173870	protein_coding	principal3	11	-1	102319742	2936
ENSMUSG00000110561	processed_pseudogene	Gm45888	ENSMUST00000212348	processed_pseudogene		8	-1	110014324	1229
ENSMUSG00000022523	protein_coding	Fgf12	ENSMUST00000100024	protein_coding	principal1	16	-1	28446277	4137
ENSMUSG00000037716	protein_coding	Ccdc33	ENSMUST00000215944	protein_coding	alternative2	9	-1	58118823	3012
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000174726	retained_intron		11	-1	102309440	480
ENSMUSG00000022523	protein_coding	Fgf12	ENSMUST00000232632	processed_transcript		16	-1	28192075	2689
ENSMUSG00000030978	protein_coding	Rrm1	ENSMUST00000033283	protein_coding	principal1	7	1	102441695	3997
ENSMUSG00000022523	protein_coding	Fgf12	ENSMUST00000232352	protein_coding		16	-1	28753068	831
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000174400	retained_intron		11	-1	102309908	668
ENSMUSG00000037716	protein_coding	Ccdc33	ENSMUST00000119665	protein_coding	alternative2	9	-1	58102225	2552
ENSMUSG00000022523	protein_coding	Fgf12	ENSMUST00000231399	protein_coding		16	-1	28564951	801
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000146896	protein_coding		11	-1	102316675	723
ENSMUSG00000030978	protein_coding	Rrm1	ENSMUST00000211720	nonsense_mediated_decay		7	1	102441883	492
ENSMUSG00000022523	protein_coding	Fgf12	ENSMUST00000231429	processed_transcript		16	-1	28291751	244
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000128016	protein_coding		11	-1	102316705	1062
ENSMUSG00000030978	protein_coding	Rrm1	ENSMUST00000210751	retained_intron		7	1	102442043	5475
ENSMUSG00000022523	protein_coding	Fgf12	ENSMUST00000231717	protein_coding		16	-1	28446075	2527
ENSMUSG00000037716	protein_coding	Ccdc33	ENSMUST00000144887	retained_intron		9	-1	58030976	922
ENSMUSG00000030978	protein_coding	Rrm1	ENSMUST00000211786	retained_intron		7	1	102456470	498
ENSMUSG00000030978	protein_coding	Rrm1	ENSMUST00000211493	retained_intron		7	1	102459973	577
ENSMUSG00000061353	protein_coding	Cxcl12	ENSMUST00000112866	protein_coding	alternative1	6	1	117168535	1878
ENSMUSG00000037716	protein_coding	Ccdc33	ENSMUST00000143797	processed_transcript		9	-1	58042036	313
ENSMUSG00000020923	protein_coding	Ubtf	ENSMUST00000178839	protein_coding	alternative2	11	-1	102319096	4580
ENSMUSG00000030978	protein_coding	Rrm1	ENSMUST00000210543	retained_intron		7	1	102462693	1151
ENSMUSG00000037716	protein_coding	Ccdc33	ENSMUST00000146741	processed_transcript		9	-1	58114360	747
ENSMUSG00000030978	protein_coding	Rrm1	ENSMUST00000209630	nonsense_mediated_decay		7	1	102463722	747
ENSMUSG00000037716	protein_coding	Ccdc33	ENSMUST00000151404	retained_intron		9	-1	58082069	835
ENSMUSG00000104708	TEC	Gm42503	ENSMUST00000199080	TEC		5	1	143770040	3706
ENSMUSG00000037716	protein_coding	Ccdc33	ENSMUST00000123746	retained_intron		9	-1	58102297	893
ENSMUSG00000024983	protein_coding	Vti1a	ENSMUST00000225529	protein_coding		19	1	55316295	1244
ENSMUSG00000037716	protein_coding	Ccdc33	ENSMUST00000098681	protein_coding		9	-1	58118807	1093
ENSMUSG00000034898	protein_coding	Filip1	ENSMUST00000239133	protein_coding	alternative2	9	-1	79977659	3830
ENSMUSG00000024983	protein_coding	Vti1a	ENSMUST00000226069	processed_transcript		19	1	55316327	1599
ENSMUSG00000024983	protein_coding	Vti1a	ENSMUST00000225392	retained_intron		19	1	55316333	3370
ENSMUSG00000034898	protein_coding	Filip1	ENSMUST00000093811	protein_coding	principal2	9	-1	79977804	4640
ENSMUSG00000024983	protein_coding	Vti1a	ENSMUST00000223690	protein_coding	alternative1	19	1	55316350	4175
ENSMUSG00000075078	protein_coding	Olfr1250	ENSMUST00000111527	protein_coding	principal1	2	-1	89661216	4386
ENSMUSG00000031329	protein_coding	Tsx	ENSMUST00000033691	protein_coding	principal1	X	1	103414467	812
ENSMUSG00000018209	protein_coding	Stk4	ENSMUST00000018353	protein_coding	principal1	2	1	164074138	5232
ENSMUSG00000034898	protein_coding	Filip1	ENSMUST00000172740	processed_transcript		9	-1	79830998	3775
ENSMUSG00000075078	protein_coding	Olfr1250	ENSMUST00000215730	protein_coding	principal1	2	-1	89661467	4632
ENSMUSG00000034898	protein_coding	Filip1	ENSMUST00000172973	protein_coding		9	-1	79962033	804
ENSMUSG00000024983	protein_coding	Vti1a	ENSMUST00000095950	protein_coding	principal2	19	1	55316351	3405
ENSMUSG00000018209	protein_coding	Stk4	ENSMUST00000137866	protein_coding		2	1	164099720	694
ENSMUSG00000075078	protein_coding	Olfr1250	ENSMUST00000099768	protein_coding	principal1	2	-1	89657533	1139
ENSMUSG00000098078	protein_coding	Gm26992	ENSMUST00000182089	protein_coding	principal1	X	1	103422010	468
ENSMUSG00000034898	protein_coding	Filip1	ENSMUST00000217264	protein_coding		9	-1	80012851	369
ENSMUSG00000018209	protein_coding	Stk4	ENSMUST00000088291	protein_coding		2	1	164110201	4098
ENSMUSG00000024983	protein_coding	Vti1a	ENSMUST00000225051	processed_transcript		19	1	55316357	2919
ENSMUSG00000018209	protein_coding	Stk4	ENSMUST00000134078	protein_coding		2	1	164070322	428
ENSMUSG00000024983	protein_coding	Vti1a	ENSMUST00000224396	processed_transcript		19	1	55381014	955
ENSMUSG00000074665	protein_coding	Bpifb4	ENSMUST00000109757	protein_coding	principal2	2	1	153938221	2420
ENSMUSG00000111827	processed_pseudogene	Gm8131	ENSMUST00000213783	processed_pseudogene		9	1	80003838	1570
ENSMUSG00000085715	antisense	Tsix	ENSMUST00000152916	antisense		X	1	103431517	4306
ENSMUSG00000085715	antisense	Tsix	ENSMUST00000211291	antisense		X	1	103447722	3263
ENSMUSG00000018209	protein_coding	Stk4	ENSMUST00000153319	processed_transcript		2	1	164081597	704
ENSMUSG00000074665	protein_coding	Bpifb4	ENSMUST00000154281	protein_coding	alternative2	2	1	153938221	3056
ENSMUSG00000092581	processed_transcript	Gm3211	ENSMUST00000172721	processed_transcript		9	1	79913200	304
ENSMUSG00000085538	antisense	Gm11455	ENSMUST00000149285	antisense		2	1	164135703	733
ENSMUSG00000061353	protein_coding	Cxcl12	ENSMUST00000112871	protein_coding	principal4	6	1	117168574	3132
ENSMUSG00000074665	protein_coding	Bpifb4	ENSMUST00000099181	protein_coding	alternative2	2	1	153943923	1479
ENSMUSG00000111574	processed_pseudogene	Gm46146	ENSMUST00000217483	processed_pseudogene		9	-1	80044216	346
ENSMUSG00000074657	protein_coding	Kif5a	ENSMUST00000099172	protein_coding	principal1	10	-1	127263348	6295
ENSMUSG00000111567	protein_coding	Olfr1251	ENSMUST00000214304	protein_coding	principal1	2	-1	89671936	3133
ENSMUSG00000074665	protein_coding	Bpifb4	ENSMUST00000109759	protein_coding	principal2	2	1	153940862	2115
ENSMUSG00000086503	lincRNA	Xist	ENSMUST00000127786	lincRNA		X	-1	103483254	17946
ENSMUSG00000061353	protein_coding	Cxcl12	ENSMUST00000134244	retained_intron		6	1	117168577	2894
ENSMUSG00000111567	protein_coding	Olfr1251	ENSMUST00000214639	protein_coding	principal1	2	-1	89671932	3071
ENSMUSG00000086503	lincRNA	Xist	ENSMUST00000153883	lincRNA		X	-1	103467256	1093
ENSMUSG00000111567	protein_coding	Olfr1251	ENSMUST00000214750	protein_coding	principal1	2	-1	89667940	1040
ENSMUSG00000097803	processed_pseudogene	Rpl31-ps16	ENSMUST00000181130	processed_pseudogene		17	1	85498633	376
ENSMUSG00000074657	protein_coding	Kif5a	ENSMUST00000217895	protein_coding	principal1	10	-1	127263080	3996
ENSMUSG00000061353	protein_coding	Cxcl12	ENSMUST00000073043	protein_coding		6	1	117168577	5627
ENSMUSG00000108094	lincRNA	Gm31108	ENSMUST00000204101	lincRNA		6	-1	143153931	1633
ENSMUSG00000074657	protein_coding	Kif5a	ENSMUST00000218298	nonsense_mediated_decay		10	-1	127263095	712
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000110888	protein_coding		14	1	76414961	4999
ENSMUSG00000107398	processed_pseudogene	Gm44306	ENSMUST00000203058	processed_pseudogene		6	1	143135087	203
ENSMUSG00000097183	lincRNA	Gm17501	ENSMUST00000181247	lincRNA		3	1	145650312	1700
ENSMUSG00000097183	lincRNA	Gm17501	ENSMUST00000197148	lincRNA		3	1	145652094	810
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000048371	protein_coding		14	1	76415587	4818
ENSMUSG00000107693	processed_pseudogene	Gm44312	ENSMUST00000203536	processed_pseudogene		6	-1	143125058	469
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000177333	processed_transcript		14	1	76416114	438
ENSMUSG00000114641	processed_pseudogene	Gm46476	ENSMUST00000224710	processed_pseudogene		14	1	68731954	403
ENSMUSG00000117344	processed_pseudogene	Gm5231	ENSMUST00000234073	processed_pseudogene		17	-1	85542703	1079
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000176886	nonsense_mediated_decay		14	1	76418354	2278
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000114193	protein_coding	principal1	16	-1	84834239	680
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000176581	protein_coding		14	1	76418648	398
ENSMUSG00000098438	processed_pseudogene	Gm27178	ENSMUST00000184962	processed_pseudogene		17	1	85599533	340
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000144799	retained_intron		16	-1	84828813	514
ENSMUSG00000114679	processed_pseudogene	Gm47256	ENSMUST00000225801	processed_pseudogene		14	1	68874835	295
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000175984	nonsense_mediated_decay		14	1	76418651	917
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000177471	nonsense_mediated_decay		14	1	76418828	801
ENSMUSG00000105608	processed_pseudogene	Gm43408	ENSMUST00000198263	processed_pseudogene		3	-1	145739166	440
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000114191	protein_coding	principal1	16	-1	84835503	742
ENSMUSG00000073679	antisense	Mxra8os	ENSMUST00000097740	antisense		4	-1	155840178	687
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000175811	processed_transcript		14	1	76437766	650
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000023608	protein_coding	principal1	16	-1	84835625	809
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000175655	retained_intron		14	1	76438933	603
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000146103	retained_intron		16	-1	84831607	526
ENSMUSG00000038235	protein_coding	F11r	ENSMUST00000043839	protein_coding	principal1	1	1	171437535	2518
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000138279	protein_coding		16	-1	84835602	472
ENSMUSG00000114833	antisense	Gm41192	ENSMUST00000224911	antisense		14	-1	69029652	637
ENSMUSG00000038235	protein_coding	F11r	ENSMUST00000144497	retained_intron		1	1	171437579	424
ENSMUSG00000038235	protein_coding	F11r	ENSMUST00000155913	retained_intron		1	1	171462850	678
ENSMUSG00000028673	protein_coding	Fuca1	ENSMUST00000030434	protein_coding	principal1	4	1	135920735	2525
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000146225	processed_transcript		16	-1	84833876	482
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000127651	retained_intron		16	-1	84835298	927
ENSMUSG00000018322	protein_coding	Tomm34	ENSMUST00000109384	protein_coding	alternative1	2	-1	164071169	1923
ENSMUSG00000028673	protein_coding	Fuca1	ENSMUST00000153592	processed_transcript		4	1	135929836	401
ENSMUSG00000029070	protein_coding	Mxra8	ENSMUST00000141883	protein_coding		4	1	155839680	1097
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000140036	processed_transcript		16	-1	84835155	443
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000140251	protein_coding		14	1	76476917	670
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000155956	processed_transcript		16	-1	84835005	203
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000150502	retained_intron		16	-1	84834832	376
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000142683	protein_coding		14	1	76487759	797
ENSMUSG00000018322	protein_coding	Tomm34	ENSMUST00000018466	protein_coding	principal3	2	-1	164071102	2302
ENSMUSG00000022890	protein_coding	Atp5j	ENSMUST00000148787	retained_intron		16	-1	84835529	817
ENSMUSG00000014813	protein_coding	Stc1	ENSMUST00000014957	protein_coding	principal1	14	1	69029238	4197
ENSMUSG00000093779	processed_pseudogene	Gm20648	ENSMUST00000175815	processed_pseudogene		9	-1	80073756	328
ENSMUSG00000028673	protein_coding	Fuca1	ENSMUST00000142033	processed_transcript		4	1	135932945	436
ENSMUSG00000084917	antisense	Gm17477	ENSMUST00000165458	antisense		9	-1	80121937	2581
ENSMUSG00000028673	protein_coding	Fuca1	ENSMUST00000146290	processed_transcript		4	1	135933072	628
ENSMUSG00000018322	protein_coding	Tomm34	ENSMUST00000132602	retained_intron		2	-1	164065715	2089
ENSMUSG00000028673	protein_coding	Fuca1	ENSMUST00000142111	processed_transcript		4	1	135936644	595
ENSMUSG00000083502	processed_pseudogene	Gm14861	ENSMUST00000119451	processed_pseudogene		X	1	103486934	455
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000175673	retained_intron		9	1	80066903	1916
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000101618	protein_coding		14	1	76488436	1043
ENSMUSG00000110819	protein_coding	Olfr1252	ENSMUST00000216203	protein_coding	principal1	2	-1	89725012	3243
ENSMUSG00000058099	protein_coding	Nfam1	ENSMUST00000231165	protein_coding	alternative2	15	-1	83033306	7634
ENSMUSG00000110819	protein_coding	Olfr1252	ENSMUST00000213196	protein_coding	principal1	2	-1	89725012	3331
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000177207	protein_coding		14	1	76504214	1476
ENSMUSG00000078998	protein_coding	Bpifa6	ENSMUST00000109753	protein_coding	principal1	2	1	153974945	1572
ENSMUSG00000110819	protein_coding	Olfr1252	ENSMUST00000186710	protein_coding	principal1	2	-1	89722201	1099
ENSMUSG00000114955	processed_pseudogene	Gm48109	ENSMUST00000225464	processed_pseudogene		14	-1	3001058	390
ENSMUSG00000114609	processed_pseudogene	Gm29767	ENSMUST00000224367	processed_pseudogene		13	1	117050734	403
ENSMUSG00000029070	protein_coding	Mxra8	ENSMUST00000030947	protein_coding	principal1	4	1	155839726	2203
ENSMUSG00000114876	processed_pseudogene	Gm48026	ENSMUST00000225335	processed_pseudogene		13	-1	117085979	349
ENSMUSG00000029070	protein_coding	Mxra8	ENSMUST00000133592	retained_intron		4	1	155839830	564
ENSMUSG00000029070	protein_coding	Mxra8	ENSMUST00000143886	retained_intron		4	1	155842304	594
ENSMUSG00000029070	protein_coding	Mxra8	ENSMUST00000141766	retained_intron		4	1	155842451	788
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000022587	protein_coding	principal1	14	1	76504478	1762
ENSMUSG00000021990	protein_coding	Spata13	ENSMUST00000159169	protein_coding		14	1	60634001	697
ENSMUSG00000029070	protein_coding	Mxra8	ENSMUST00000126487	retained_intron		4	1	155842472	715
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000134109	protein_coding		14	1	76504530	801
ENSMUSG00000029070	protein_coding	Mxra8	ENSMUST00000132142	processed_transcript		4	1	155842923	449
ENSMUSG00000044814	protein_coding	Olfr543	ENSMUST00000219647	protein_coding	principal1	7	-1	102481679	1456
ENSMUSG00000022010	protein_coding	Tsc22d1	ENSMUST00000133224	protein_coding		14	1	76505098	786
ENSMUSG00000044814	protein_coding	Olfr543	ENSMUST00000061482	protein_coding	principal1	7	-1	102477902	1130
ENSMUSG00000058099	protein_coding	Nfam1	ENSMUST00000109503	protein_coding	principal3	15	-1	83023138	2834
ENSMUSG00000058099	protein_coding	Nfam1	ENSMUST00000023076	protein_coding	alternative2	15	-1	83029950	2811
ENSMUSG00000034936	protein_coding	Arl4d	ENSMUST00000039388	protein_coding	principal1	11	1	101665541	1382
ENSMUSG00000008976	protein_coding	Gabpa	ENSMUST00000114184	protein_coding	principal1	16	1	84834925	2202
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000226284	protein_coding	alternative2	17	-1	24632627	6266
ENSMUSG00000016382	protein_coding	Pls3	ENSMUST00000114059	protein_coding	principal1	X	-1	75875182	3149
ENSMUSG00000028194	protein_coding	Ddah1	ENSMUST00000029845	protein_coding	principal1	3	1	145758675	3764
ENSMUSG00000090487	protein_coding	Gm2888	ENSMUST00000170521	protein_coding	principal5	14	1	3030002	1758
ENSMUSG00000090487	protein_coding	Gm2888	ENSMUST00000178577	protein_coding	alternative2	14	1	3030007	618
ENSMUSG00000008976	protein_coding	Gabpa	ENSMUST00000009120	protein_coding	principal1	16	1	84835124	4987
ENSMUSG00000028194	protein_coding	Ddah1	ENSMUST00000120310	protein_coding		3	1	145760748	2291
ENSMUSG00000058099	protein_coding	Nfam1	ENSMUST00000100377	nonsense_mediated_decay		15	-1	83033261	2694
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000226398	protein_coding	principal2	17	-1	24632608	5459
ENSMUSG00000027568	protein_coding	Ntsr1	ENSMUST00000029084	protein_coding	principal1	2	1	180499976	3917
ENSMUSG00000028194	protein_coding	Ddah1	ENSMUST00000127193	processed_transcript		3	1	145810479	629
ENSMUSG00000058099	protein_coding	Nfam1	ENSMUST00000231204	nonsense_mediated_decay		15	-1	83023083	1732
ENSMUSG00000008976	protein_coding	Gabpa	ENSMUST00000126031	processed_transcript		16	1	84852583	586
ENSMUSG00000114792	lincRNA	Gm6416	ENSMUST00000224375	lincRNA		13	1	117130027	1620
ENSMUSG00000016382	protein_coding	Pls3	ENSMUST00000114058	protein_coding		X	-1	75826953	3032
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000227432	retained_intron		17	-1	24597058	570
ENSMUSG00000008976	protein_coding	Gabpa	ENSMUST00000148035	retained_intron		16	1	84856040	816
ENSMUSG00000105388	processed_pseudogene	Rpl36a-ps2	ENSMUST00000197973	processed_pseudogene		3	1	145879020	321
ENSMUSG00000008976	protein_coding	Gabpa	ENSMUST00000139101	processed_transcript		16	1	84860045	336
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000227094	retained_intron		17	-1	24597055	454
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000232248	lincRNA		16	1	73072338	1359
ENSMUSG00000016382	protein_coding	Pls3	ENSMUST00000033547	protein_coding	principal1	X	-1	75874574	3242
ENSMUSG00000114964	processed_pseudogene	Gm18945	ENSMUST00000225620	processed_pseudogene		13	1	117143106	1090
ENSMUSG00000098713	processed_pseudogene	Rps2-ps5	ENSMUST00000184266	processed_pseudogene		14	1	69158671	849
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000227804	protein_coding		17	-1	24598307	798
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000232549	lincRNA		16	1	73072342	1315
ENSMUSG00000027568	protein_coding	Ntsr1	ENSMUST00000170448	protein_coding	principal1	2	1	180500227	2594
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000232059	lincRNA		16	1	73072365	749
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000227745	protein_coding	alternative2	17	-1	24632595	5598
ENSMUSG00000082746	processed_pseudogene	Rps12-ps1	ENSMUST00000121980	processed_pseudogene		X	1	103489517	401
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000231534	lincRNA		16	1	73072365	903
ENSMUSG00000016382	protein_coding	Pls3	ENSMUST00000114057	protein_coding	principal1	X	-1	75843063	3160
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000232006	lincRNA		16	1	73072365	1103
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000228412	protein_coding	alternative2	17	-1	24632630	5432
ENSMUSG00000062960	protein_coding	Kdr	ENSMUST00000113516	protein_coding	principal1	5	-1	75978458	5924
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000232597	lincRNA		16	1	73072375	2245
ENSMUSG00000016382	protein_coding	Pls3	ENSMUST00000137192	protein_coding		X	-1	75843185	2000
ENSMUSG00000029577	protein_coding	Ube3b	ENSMUST00000074002	protein_coding	principal1	5	1	114380607	5194
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000232507	retained_intron		16	1	73072375	890
ENSMUSG00000043925	protein_coding	Olfr544	ENSMUST00000051201	protein_coding	principal1	7	-1	102488313	3270
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000231838	lincRNA		16	1	73072375	875
ENSMUSG00000016382	protein_coding	Pls3	ENSMUST00000126599	processed_transcript		X	-1	75875099	656
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000226473	processed_transcript		17	-1	24597249	137
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000232394	lincRNA		16	1	73072404	1037
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000231943	lincRNA		16	1	73072415	549
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000226691	retained_intron		17	-1	24599082	623
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000231434	lincRNA		16	1	73098907	1043
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000227607	protein_coding		17	-1	24632575	4269
ENSMUSG00000116976	processed_transcript	4930500H12Rik	ENSMUST00000231486	lincRNA		16	1	73098988	761
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000227330	processed_transcript		17	-1	24604155	354
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000226428	retained_intron		17	-1	24606543	782
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000227658	nonsense_mediated_decay		17	-1	24607768	393
ENSMUSG00000028015	protein_coding	Ctso	ENSMUST00000029649	protein_coding	principal1	3	1	81932601	3468
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000228729	retained_intron		17	-1	24606510	461
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000226985	retained_intron		17	-1	24605550	699
ENSMUSG00000028015	protein_coding	Ctso	ENSMUST00000192067	retained_intron		3	1	81932623	703
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000226309	retained_intron		17	-1	24606538	677
ENSMUSG00000062960	protein_coding	Kdr	ENSMUST00000202473	retained_intron		5	-1	75978458	4023
ENSMUSG00000059119	protein_coding	Nap1l4	ENSMUST00000072727	protein_coding	principal3	7	-1	143549092	2285
ENSMUSG00000028015	protein_coding	Ctso	ENSMUST00000143307	processed_transcript		3	1	81932643	1048
ENSMUSG00000062960	protein_coding	Kdr	ENSMUST00000149573	retained_intron		5	-1	75978458	3174
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000227543	retained_intron		17	-1	24609131	1545
ENSMUSG00000028015	protein_coding	Ctso	ENSMUST00000155144	retained_intron		3	1	81950937	768
ENSMUSG00000029577	protein_coding	Ube3b	ENSMUST00000130169	nonsense_mediated_decay		5	1	114380826	4888
ENSMUSG00000059119	protein_coding	Nap1l4	ENSMUST00000208190	protein_coding	alternative1	7	-1	143549106	2259
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000226242	retained_intron		17	-1	24614581	859
ENSMUSG00000079410	protein_coding	Gm2897	ENSMUST00000166494	protein_coding	principal1	14	1	3049285	1980
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000228220	retained_intron		17	-1	24610638	376
ENSMUSG00000059119	protein_coding	Nap1l4	ENSMUST00000209098	protein_coding	alternative1	7	-1	143548828	2281
ENSMUSG00000029577	protein_coding	Ube3b	ENSMUST00000151809	nonsense_mediated_decay		5	1	114380833	740
ENSMUSG00000100152	processed_pseudogene	Gm29598	ENSMUST00000188996	processed_pseudogene		1	-1	128494432	588
ENSMUSG00000029577	protein_coding	Ube3b	ENSMUST00000196651	nonsense_mediated_decay		5	1	114398784	3879
ENSMUSG00000059119	protein_coding	Nap1l4	ENSMUST00000208282	retained_intron		7	-1	143524660	661
ENSMUSG00000079101	processed_pseudogene	Esd-ps	ENSMUST00000170684	processed_pseudogene		14	-1	3052499	847
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000227754	processed_transcript		17	-1	24632602	2357
ENSMUSG00000059119	protein_coding	Nap1l4	ENSMUST00000207244	retained_intron		7	-1	143529783	659
ENSMUSG00000100941	processed_pseudogene	Gm29597	ENSMUST00000188035	processed_pseudogene		1	-1	128515117	308
ENSMUSG00000029577	protein_coding	Ube3b	ENSMUST00000150630	processed_transcript		5	1	114402725	663
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000227509	protein_coding		17	-1	24632593	432
ENSMUSG00000059119	protein_coding	Nap1l4	ENSMUST00000208317	protein_coding		7	-1	143535989	658
ENSMUSG00000046791	protein_coding	Riox1	ENSMUST00000053744	protein_coding	principal1	12	1	83950608	2344
ENSMUSG00000096953	antisense	Gm26571	ENSMUST00000221865	antisense		12	-1	83950578	555
ENSMUSG00000075075	protein_coding	Olfr1253	ENSMUST00000213484	protein_coding	principal1	2	-1	89757090	4812
ENSMUSG00000002496	protein_coding	Tsc2	ENSMUST00000097373	protein_coding	principal2	17	-1	24632629	6018
ENSMUSG00000096953	antisense	Gm26571	ENSMUST00000222424	antisense		12	-1	83950840	493
ENSMUSG00000059119	protein_coding	Nap1l4	ENSMUST00000207948	protein_coding		7	-1	143549104	341
ENSMUSG00000075075	protein_coding	Olfr1253	ENSMUST00000215988	protein_coding	principal1	2	-1	89756849	6332
ENSMUSG00000035930	protein_coding	Chst4	ENSMUST00000109222	protein_coding	principal2	8	-1	110039354	1942
ENSMUSG00000096953	antisense	Gm26571	ENSMUST00000220615	antisense		12	-1	83950736	517
ENSMUSG00000059119	protein_coding	Nap1l4	ENSMUST00000208093	protein_coding		7	-1	143548803	352
ENSMUSG00000021990	protein_coding	Spata13	ENSMUST00000160973	protein_coding		14	1	60634243	7467
ENSMUSG00000096953	antisense	Gm26571	ENSMUST00000223215	antisense		12	-1	83950853	591
ENSMUSG00000075075	protein_coding	Olfr1253	ENSMUST00000215185	protein_coding	principal1	2	-1	89757090	4984
ENSMUSG00000035930	protein_coding	Chst4	ENSMUST00000211894	protein_coding	alternative2	8	-1	110039740	2146
ENSMUSG00000099635	antisense	Gm28528	ENSMUST00000188560	antisense		17	-1	85621001	857
ENSMUSG00000059119	protein_coding	Nap1l4	ENSMUST00000207870	protein_coding		7	-1	143541770	185
ENSMUSG00000096953	antisense	Gm26571	ENSMUST00000181399	antisense		12	-1	83951355	666
ENSMUSG00000035930	protein_coding	Chst4	ENSMUST00000212934	protein_coding		8	-1	110039377	772
ENSMUSG00000075075	protein_coding	Olfr1253	ENSMUST00000099765	protein_coding	principal1	2	-1	89752826	957
ENSMUSG00000021990	protein_coding	Spata13	ENSMUST00000159729	protein_coding		14	1	60634734	686
ENSMUSG00000103936	processed_pseudogene	Gm36965	ENSMUST00000193797	processed_pseudogene		1	-1	5618230	394
ENSMUSG00000038805	protein_coding	Six3	ENSMUST00000175898	protein_coding	principal2	17	1	85613608	2419
ENSMUSG00000021990	protein_coding	Spata13	ENSMUST00000159135	processed_transcript		14	1	60634755	429
ENSMUSG00000103519	TEC	Gm37429	ENSMUST00000193807	TEC		1	-1	5844672	1799
ENSMUSG00000032855	protein_coding	Pkd1	ENSMUST00000228550	protein_coding		17	1	24549834	1050
ENSMUSG00000021990	protein_coding	Spata13	ENSMUST00000160095	protein_coding		14	1	60691975	719
ENSMUSG00000038805	protein_coding	Six3	ENSMUST00000176081	protein_coding	principal2	17	1	85620834	3680
ENSMUSG00000021990	protein_coding	Spata13	ENSMUST00000162131	protein_coding		14	1	60702953	1208
ENSMUSG00000044824	protein_coding	Olfr545	ENSMUST00000217464	processed_transcript		7	-1	102499565	2991
ENSMUSG00000033774	protein_coding	Npbwr1	ENSMUST00000044180	protein_coding	principal1	1	-1	5917398	3692
ENSMUSG00000041534	protein_coding	Rbp3	ENSMUST00000035695	protein_coding	principal1	14	1	33954003	5295
ENSMUSG00000038805	protein_coding	Six3	ENSMUST00000162695	protein_coding	alternative2	17	1	85621031	2838
ENSMUSG00000044824	protein_coding	Olfr545	ENSMUST00000216116	protein_coding	principal1	7	-1	102499573	3496
ENSMUSG00000021990	protein_coding	Spata13	ENSMUST00000162945	protein_coding	principal1	14	1	60732906	5469
ENSMUSG00000044824	protein_coding	Olfr545	ENSMUST00000058750	protein_coding	principal1	7	-1	102494773	951
ENSMUSG00000064043	processed_transcript	Trerf1	ENSMUST00000188947	retained_intron		17	1	47140875	3503
ENSMUSG00000103090	processed_pseudogene	Gm19214	ENSMUST00000191956	processed_pseudogene		1	-1	6050045	1083
ENSMUSG00000021990	protein_coding	Spata13	ENSMUST00000162939	retained_intron		14	1	60751077	3161
ENSMUSG00000109822	processed_pseudogene	Gm8556	ENSMUST00000210437	processed_pseudogene		7	-1	102521009	664
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000175921	antisense		17	-1	85615348	2737
ENSMUSG00000021990	protein_coding	Spata13	ENSMUST00000022566	protein_coding		14	1	60634729	7517
ENSMUSG00000091289	processed_pseudogene	Gm17051	ENSMUST00000170787	processed_pseudogene		14	-1	3085385	487
ENSMUSG00000117107	processed_pseudogene	Gm18738	ENSMUST00000232895	processed_pseudogene		17	1	71483392	523
ENSMUSG00000109906	unprocessed_pseudogene	Olfr546-ps1	ENSMUST00000210328	unprocessed_pseudogene		7	1	102521331	326
ENSMUSG00000044519	protein_coding	Zfp488	ENSMUST00000166737	protein_coding	principal1	14	-1	33978764	4301
ENSMUSG00000064043	processed_transcript	Trerf1	ENSMUST00000190080	processed_transcript		17	1	47140942	7045
ENSMUSG00000075074	protein_coding	Olfr1254	ENSMUST00000216587	protein_coding	principal1	2	-1	89793619	2183
ENSMUSG00000025470	protein_coding	Zfp511	ENSMUST00000210419	retained_intron		7	1	140036391	339
ENSMUSG00000064043	processed_transcript	Trerf1	ENSMUST00000191153	retained_intron		17	1	47141216	3255
ENSMUSG00000075074	protein_coding	Olfr1254	ENSMUST00000111523	protein_coding	principal1	2	-1	89793619	2650
ENSMUSG00000064043	processed_transcript	Trerf1	ENSMUST00000188730	retained_intron		17	1	47212387	3280
ENSMUSG00000075074	protein_coding	Olfr1254	ENSMUST00000099764	protein_coding	principal1	2	-1	89789350	945
ENSMUSG00000064043	processed_transcript	Trerf1	ENSMUST00000190020	processed_transcript		17	1	47294069	4276
ENSMUSG00000025470	protein_coding	Zfp511	ENSMUST00000211789	nonsense_mediated_decay		7	1	140036405	878
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000161146	antisense		17	-1	85618372	1265
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000176958	antisense		17	-1	85618365	2889
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000177220	antisense		17	-1	85618398	5601
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000176917	antisense		17	-1	85618340	600
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000159030	antisense		17	-1	85618275	1787
ENSMUSG00000025470	protein_coding	Zfp511	ENSMUST00000168194	protein_coding	principal1	7	1	140036412	1076
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000176556	retained_intron		17	-1	85618385	4094
ENSMUSG00000025470	protein_coding	Zfp511	ENSMUST00000210882	protein_coding		7	1	140036528	1757
ENSMUSG00000032855	protein_coding	Pkd1	ENSMUST00000035565	protein_coding	principal1	17	1	24549950	14164
ENSMUSG00000071613	protein_coding	Gm10340	ENSMUST00000170790	protein_coding	principal1	14	1	3133997	1755
ENSMUSG00000025470	protein_coding	Zfp511	ENSMUST00000210089	retained_intron		7	1	140036789	710
ENSMUSG00000025470	protein_coding	Zfp511	ENSMUST00000210936	retained_intron		7	1	140036870	533
ENSMUSG00000064043	processed_transcript	Trerf1	ENSMUST00000077951	processed_transcript		17	1	47140942	4544
ENSMUSG00000032855	protein_coding	Pkd1	ENSMUST00000228745	protein_coding		17	1	24568336	241
ENSMUSG00000071613	protein_coding	Gm10340	ENSMUST00000188235	protein_coding		14	1	3134002	615
ENSMUSG00000032855	protein_coding	Pkd1	ENSMUST00000227107	nonsense_mediated_decay		17	1	24576544	6681
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000176432	antisense		17	-1	85618221	524
ENSMUSG00000032855	protein_coding	Pkd1	ENSMUST00000226883	nonsense_mediated_decay		17	1	24578026	855
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000177487	antisense		17	-1	85618223	537
ENSMUSG00000073979	protein_coding	Olfr547	ENSMUST00000098229	protein_coding	principal1	7	1	102534749	936
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000161688	antisense		17	-1	85618275	567
ENSMUSG00000032855	protein_coding	Pkd1	ENSMUST00000226178	retained_intron		17	1	24579160	3926
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000176375	antisense		17	-1	85616246	1404
ENSMUSG00000032855	protein_coding	Pkd1	ENSMUST00000227836	protein_coding		17	1	24585846	702
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000175913	antisense		17	-1	85618073	791
ENSMUSG00000093460	processed_transcript	Six3os1	ENSMUST00000160691	antisense		17	-1	85618358	722
ENSMUSG00000032855	protein_coding	Pkd1	ENSMUST00000228750	retained_intron		17	1	24587619	762
ENSMUSG00000090684	processed_pseudogene	Gm17221	ENSMUST00000163909	processed_pseudogene		14	-1	3150084	481
ENSMUSG00000032855	protein_coding	Pkd1	ENSMUST00000227058	protein_coding		17	1	24591194	711
ENSMUSG00000021255	protein_coding	Esrrb	ENSMUST00000116402	protein_coding	alternative2	12	1	86361117	4300
ENSMUSG00000032855	protein_coding	Pkd1	ENSMUST00000228581	nonsense_mediated_decay		17	1	24591404	235
ENSMUSG00000073978	protein_coding	Olfr548-ps1	ENSMUST00000210064	protein_coding	principal1	7	1	102540896	4287
ENSMUSG00000021255	protein_coding	Esrrb	ENSMUST00000110203	protein_coding		12	1	86421644	2363
ENSMUSG00000073978	protein_coding	Olfr548-ps1	ENSMUST00000098228	protein_coding		7	1	102541938	933
ENSMUSG00000092499	antisense	1700092C10Rik	ENSMUST00000172547	antisense		14	-1	69171857	585
ENSMUSG00000047638	protein_coding	Nr1h4	ENSMUST00000058126	protein_coding	principal3	10	-1	89506649	1964
ENSMUSG00000021255	protein_coding	Esrrb	ENSMUST00000110204	protein_coding	principal3	12	1	86421644	4196
ENSMUSG00000025474	protein_coding	Tubgcp2	ENSMUST00000210224	nonsense_mediated_decay		7	-1	140036262	2837
ENSMUSG00000044186	protein_coding	Nkx2-6	ENSMUST00000062437	protein_coding	principal1	14	1	69171802	1134
ENSMUSG00000021255	protein_coding	Esrrb	ENSMUST00000021680	protein_coding		12	1	86421883	2136
ENSMUSG00000021255	protein_coding	Esrrb	ENSMUST00000167891	protein_coding		12	1	86470117	1344
ENSMUSG00000021255	protein_coding	Esrrb	ENSMUST00000136464	processed_transcript		12	1	86504409	694
ENSMUSG00000107514	processed_pseudogene	Gm32381	ENSMUST00000203192	processed_pseudogene		6	-1	98860815	476
ENSMUSG00000025474	protein_coding	Tubgcp2	ENSMUST00000209930	retained_intron		7	-1	140036329	3341
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000156130	processed_transcript		2	-1	34822920	2265
ENSMUSG00000047638	protein_coding	Nr1h4	ENSMUST00000105297	protein_coding		10	-1	89533585	2013
ENSMUSG00000047638	protein_coding	Nr1h4	ENSMUST00000105296	protein_coding	alternative1	10	-1	89506658	1985
ENSMUSG00000112461	TEC	Gm47625	ENSMUST00000219933	TEC		10	1	116284549	1795
ENSMUSG00000044647	protein_coding	Csrnp3	ENSMUST00000122912	protein_coding	principal3	2	1	65845767	10672
ENSMUSG00000020154	protein_coding	Ptprb	ENSMUST00000218601	processed_transcript		10	1	116275523	639
ENSMUSG00000020154	protein_coding	Ptprb	ENSMUST00000217925	retained_intron		10	1	116275523	2633
ENSMUSG00000082638	processed_pseudogene	Gm12815	ENSMUST00000121737	processed_pseudogene		4	-1	112146232	135
ENSMUSG00000044647	protein_coding	Csrnp3	ENSMUST00000053910	protein_coding	principal3	2	1	65845842	4495
ENSMUSG00000084326	processed_pseudogene	Gm12820	ENSMUST00000119233	processed_pseudogene		4	-1	112121344	342
ENSMUSG00000044647	protein_coding	Csrnp3	ENSMUST00000139896	retained_intron		2	1	65845845	1056
ENSMUSG00000044647	protein_coding	Csrnp3	ENSMUST00000112397	nonsense_mediated_decay		2	1	65845855	1895
ENSMUSG00000031264	protein_coding	Btk	ENSMUST00000033617	protein_coding	principal1	X	-1	134583140	2540
ENSMUSG00000044647	protein_coding	Csrnp3	ENSMUST00000129133	retained_intron		2	1	65860597	665
ENSMUSG00000031264	protein_coding	Btk	ENSMUST00000113213	protein_coding		X	-1	134583128	2121
ENSMUSG00000030275	protein_coding	Etnk1	ENSMUST00000204947	protein_coding		6	1	143167221	1791
ENSMUSG00000044647	protein_coding	Csrnp3	ENSMUST00000176109	protein_coding	alternative2	2	1	65930137	2958
ENSMUSG00000030275	protein_coding	Etnk1	ENSMUST00000032413	protein_coding	principal1	6	1	143167230	6433
ENSMUSG00000044647	protein_coding	Csrnp3	ENSMUST00000145598	protein_coding	alternative2	2	1	65931865	2566
ENSMUSG00000030275	protein_coding	Etnk1	ENSMUST00000203341	retained_intron		6	1	143167254	6575
ENSMUSG00000030275	protein_coding	Etnk1	ENSMUST00000205256	protein_coding		6	1	143167254	2647
ENSMUSG00000044647	protein_coding	Csrnp3	ENSMUST00000112394	protein_coding	alternative2	2	1	65948949	1821
ENSMUSG00000004187	protein_coding	Kifc2	ENSMUST00000230451	protein_coding	alternative2	15	1	76659858	3009
ENSMUSG00000107802	antisense	1700126G02Rik	ENSMUST00000204351	antisense		6	-1	143221448	725
ENSMUSG00000004187	protein_coding	Kifc2	ENSMUST00000229112	processed_transcript		15	1	76660337	396
ENSMUSG00000052865	antisense	Gm13619	ENSMUST00000155722	antisense		2	-1	65860619	2138
ENSMUSG00000085160	antisense	Gm13617	ENSMUST00000155350	antisense		2	-1	65954070	675
ENSMUSG00000025474	protein_coding	Tubgcp2	ENSMUST00000026547	protein_coding	principal1	7	-1	140036266	2960
ENSMUSG00000031264	protein_coding	Btk	ENSMUST00000128333	processed_transcript		X	-1	134583570	388
ENSMUSG00000031264	protein_coding	Btk	ENSMUST00000150245	processed_transcript		X	-1	134582473	481
ENSMUSG00000004187	protein_coding	Kifc2	ENSMUST00000004294	protein_coding	principal2	15	1	76660566	3218
ENSMUSG00000031264	protein_coding	Btk	ENSMUST00000132664	retained_intron		X	-1	134583140	1920
ENSMUSG00000045148	protein_coding	Olfr1255	ENSMUST00000214508	protein_coding	alternative2	2	1	89812051	2253
ENSMUSG00000025474	protein_coding	Tubgcp2	ENSMUST00000211638	protein_coding		7	-1	140036669	3060
ENSMUSG00000045148	protein_coding	Olfr1255	ENSMUST00000057369	protein_coding	principal2	2	1	89816328	933
ENSMUSG00000090549	processed_pseudogene	Rpl28-ps4	ENSMUST00000170447	processed_pseudogene		6	-1	117214066	377
ENSMUSG00000025474	protein_coding	Tubgcp2	ENSMUST00000211186	retained_intron		7	-1	140036390	2610
ENSMUSG00000083687	processed_pseudogene	Gm15154	ENSMUST00000117590	processed_pseudogene		X	1	134551882	366
ENSMUSG00000025474	protein_coding	Tubgcp2	ENSMUST00000211261	nonsense_mediated_decay		7	-1	140033777	565
ENSMUSG00000025474	protein_coding	Tubgcp2	ENSMUST00000209574	protein_coding		7	-1	140036332	646
ENSMUSG00000107434	lincRNA	Gm4640	ENSMUST00000203927	lincRNA		6	-1	117423617	2352
ENSMUSG00000073977	protein_coding	Olfr549	ENSMUST00000217478	protein_coding	principal1	7	1	102549870	1891
ENSMUSG00000004187	protein_coding	Kifc2	ENSMUST00000230964	nonsense_mediated_decay		15	1	76660636	3118
ENSMUSG00000100078	processed_pseudogene	Gm6170	ENSMUST00000187672	processed_pseudogene		1	-1	128521460	1388
ENSMUSG00000073977	protein_coding	Olfr549	ENSMUST00000098227	protein_coding	principal1	7	1	102554286	951
ENSMUSG00000004187	protein_coding	Kifc2	ENSMUST00000230124	retained_intron		15	1	76660699	3193
ENSMUSG00000004187	protein_coding	Kifc2	ENSMUST00000229513	retained_intron		15	1	76664068	635
ENSMUSG00000031290	protein_coding	Lrch2	ENSMUST00000136789	protein_coding		X	-1	147554081	4930
ENSMUSG00000031290	protein_coding	Lrch2	ENSMUST00000137665	protein_coding		X	-1	147519063	1538
ENSMUSG00000027569	protein_coding	Mrgbp	ENSMUST00000029085	protein_coding	principal1	2	1	180582712	1510
ENSMUSG00000028032	protein_coding	Papss1	ENSMUST00000029666	protein_coding	principal3	3	1	131564768	2600
ENSMUSG00000031290	protein_coding	Lrch2	ENSMUST00000134265	retained_intron		X	-1	147498165	4687
ENSMUSG00000031290	protein_coding	Lrch2	ENSMUST00000152838	protein_coding		X	-1	147512162	3941
ENSMUSG00000031290	protein_coding	Lrch2	ENSMUST00000151730	processed_transcript		X	-1	147503470	567
ENSMUSG00000043661	transcribed_processed_pseudogene	Gm9785	ENSMUST00000144563	transcribed_processed_pseudogene		X	-1	103525908	593
ENSMUSG00000031290	protein_coding	Lrch2	ENSMUST00000112819	protein_coding	principal1	X	-1	147554050	4892
ENSMUSG00000033538	protein_coding	Casp4	ENSMUST00000162846	protein_coding		9	1	5308828	361
ENSMUSG00000037216	protein_coding	Lipt1	ENSMUST00000128085	protein_coding		1	1	37871738	774
ENSMUSG00000043661	transcribed_processed_pseudogene	Gm9785	ENSMUST00000062642	processed_transcript		X	-1	103526330	1006
ENSMUSG00000096217	processed_pseudogene	Gm4904	ENSMUST00000178243	processed_pseudogene		14	-1	3255873	1195
ENSMUSG00000103697	TEC	Gm38020	ENSMUST00000193066	TEC		X	-1	103581101	4676
ENSMUSG00000053929	protein_coding	Cyhr1	ENSMUST00000081291	protein_coding	principal3	15	-1	76660061	3959
ENSMUSG00000091849	processed_transcript	Gm17188	ENSMUST00000165178	antisense		14	-1	3262317	680
ENSMUSG00000080250	unprocessed_pseudogene	Gm16400	ENSMUST00000116523	unprocessed_pseudogene		X	1	147720978	1029
ENSMUSG00000091849	processed_transcript	Gm17188	ENSMUST00000169417	processed_transcript		14	-1	3262297	677
ENSMUSG00000037216	protein_coding	Lipt1	ENSMUST00000041621	protein_coding	principal1	1	1	37872206	1485
ENSMUSG00000091849	processed_transcript	Gm17188	ENSMUST00000172055	processed_transcript		14	-1	3262297	2078
ENSMUSG00000081004	transcribed_processed_pseudogene	Gm9157	ENSMUST00000117673	transcribed_processed_pseudogene		X	1	103529483	225
ENSMUSG00000084191	unprocessed_pseudogene	Gm15167	ENSMUST00000121997	unprocessed_pseudogene		X	1	147733154	187
ENSMUSG00000053929	protein_coding	Cyhr1	ENSMUST00000176274	protein_coding	alternative2	15	-1	76656920	1854
ENSMUSG00000091849	processed_transcript	Gm17188	ENSMUST00000163873	processed_transcript		14	-1	3262304	1293
ENSMUSG00000027569	protein_coding	Mrgbp	ENSMUST00000150757	retained_intron		2	1	180582723	1825
ENSMUSG00000080796	processed_pseudogene	Gm9159	ENSMUST00000120661	processed_pseudogene		X	1	103597771	566
ENSMUSG00000037216	protein_coding	Lipt1	ENSMUST00000142670	protein_coding		1	1	37872374	812
ENSMUSG00000027569	protein_coding	Mrgbp	ENSMUST00000130277	retained_intron		2	1	180582726	3150
ENSMUSG00000053929	protein_coding	Cyhr1	ENSMUST00000229552	retained_intron		15	-1	76650828	2933
ENSMUSG00000037216	protein_coding	Lipt1	ENSMUST00000144440	protein_coding		1	1	37872562	775
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000234690	lincRNA		X	1	103493556	1115
ENSMUSG00000027569	protein_coding	Mrgbp	ENSMUST00000123609	retained_intron		2	1	180582732	1488
ENSMUSG00000096039	protein_coding	D830030K20Rik	ENSMUST00000223972	processed_transcript		14	1	3208488	649
ENSMUSG00000053929	protein_coding	Cyhr1	ENSMUST00000229524	protein_coding	alternative2	15	-1	76656716	1513
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000181020	lincRNA		X	1	103493558	3802
ENSMUSG00000027569	protein_coding	Mrgbp	ENSMUST00000149969	retained_intron		2	1	180582758	2673
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000235041	lincRNA		X	1	103493564	1049
ENSMUSG00000096039	protein_coding	D830030K20Rik	ENSMUST00000225885	protein_coding		14	1	3208529	1142
ENSMUSG00000053929	protein_coding	Cyhr1	ENSMUST00000229541	processed_transcript		15	-1	76656716	452
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000234244	lincRNA		X	1	103493564	1806
ENSMUSG00000053929	protein_coding	Cyhr1	ENSMUST00000230719	retained_intron		15	-1	76659733	1601
ENSMUSG00000053929	protein_coding	Cyhr1	ENSMUST00000231152	protein_coding		15	-1	76659756	1271
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000234173	lincRNA		X	1	103493576	1078
ENSMUSG00000096039	protein_coding	D830030K20Rik	ENSMUST00000112797	protein_coding	principal1	14	1	3208577	1695
ENSMUSG00000055960	protein_coding	Skint4	ENSMUST00000069769	protein_coding	alternative2	4	1	112072639	3367
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000183027	lincRNA		X	1	103493577	1044
ENSMUSG00000028032	protein_coding	Papss1	ENSMUST00000197402	nonsense_mediated_decay		3	1	131564865	2790
ENSMUSG00000027569	protein_coding	Mrgbp	ENSMUST00000169630	protein_coding	principal1	2	1	180581304	1192
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000234815	lincRNA		X	1	103493581	1443
ENSMUSG00000096039	protein_coding	D830030K20Rik	ENSMUST00000178670	protein_coding		14	1	3225315	441
ENSMUSG00000033538	protein_coding	Casp4	ENSMUST00000027012	protein_coding	principal1	9	1	5308849	1435
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000234103	lincRNA		X	1	103493719	1327
ENSMUSG00000028032	protein_coding	Papss1	ENSMUST00000199878	protein_coding	alternative1	3	1	131564896	2648
ENSMUSG00000055960	protein_coding	Skint4	ENSMUST00000106564	protein_coding	alternative2	4	1	112081470	3997
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000182447	lincRNA		X	1	103493770	712
ENSMUSG00000115092	lincRNA	E130202H07Rik	ENSMUST00000228107	lincRNA		14	1	76526592	415
ENSMUSG00000053929	protein_coding	Cyhr1	ENSMUST00000066677	protein_coding		15	-1	76660108	1168
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000182486	lincRNA		X	1	103493795	345
ENSMUSG00000115092	lincRNA	E130202H07Rik	ENSMUST00000227784	lincRNA		14	1	76526616	3733
ENSMUSG00000028032	protein_coding	Papss1	ENSMUST00000196408	protein_coding		3	1	131564897	492
ENSMUSG00000097571	lincRNA	Jpx	ENSMUST00000235019	lincRNA		X	1	103500347	1358
ENSMUSG00000055960	protein_coding	Skint4	ENSMUST00000106565	protein_coding	alternative2	4	1	112072016	3322
ENSMUSG00000053929	protein_coding	Cyhr1	ENSMUST00000177359	protein_coding		15	-1	76660117	1110
ENSMUSG00000079409	protein_coding	Gm5795	ENSMUST00000100920	protein_coding	principal2	14	1	3188255	984
ENSMUSG00000020154	protein_coding	Ptprb	ENSMUST00000218553	protein_coding		10	1	116275550	7016
ENSMUSG00000028032	protein_coding	Papss1	ENSMUST00000200527	protein_coding	alternative1	3	1	131564899	2811
ENSMUSG00000079409	protein_coding	Gm5795	ENSMUST00000171150	protein_coding	alternative2	14	1	3188313	1758
ENSMUSG00000026088	protein_coding	Mitd1	ENSMUST00000139725	protein_coding	principal1	1	-1	37890407	1175
ENSMUSG00000028032	protein_coding	Papss1	ENSMUST00000196638	nonsense_mediated_decay		3	1	131564935	625
ENSMUSG00000079409	protein_coding	Gm5795	ENSMUST00000166275	protein_coding		14	1	3188318	612
ENSMUSG00000095512	processed_pseudogene	Gm17222	ENSMUST00000180135	processed_pseudogene		14	-1	3211821	847
ENSMUSG00000105973	TEC	Gm42881	ENSMUST00000198636	TEC		3	-1	131613780	3344
ENSMUSG00000020154	protein_coding	Ptprb	ENSMUST00000092167	protein_coding	principal1	10	1	116301372	11911
ENSMUSG00000026088	protein_coding	Mitd1	ENSMUST00000027257	protein_coding	principal1	1	-1	37890411	1231
ENSMUSG00000026088	protein_coding	Mitd1	ENSMUST00000131754	processed_transcript		1	-1	37880118	669
ENSMUSG00000055960	protein_coding	Skint4	ENSMUST00000106566	protein_coding	principal3	4	1	112081470	3997
ENSMUSG00000033538	protein_coding	Casp4	ENSMUST00000160064	nonsense_mediated_decay		9	1	5308860	1901
ENSMUSG00000033538	protein_coding	Casp4	ENSMUST00000152651	retained_intron		9	1	5308860	1614
ENSMUSG00000026088	protein_coding	Mitd1	ENSMUST00000127170	processed_transcript		1	-1	37881868	723
ENSMUSG00000060244	protein_coding	Alyref2	ENSMUST00000081527	protein_coding	principal1	1	1	171503478	1273
ENSMUSG00000026088	protein_coding	Mitd1	ENSMUST00000138806	retained_intron		1	-1	37890276	989
ENSMUSG00000033538	protein_coding	Casp4	ENSMUST00000160521	retained_intron		9	1	5308865	365
ENSMUSG00000083686	processed_pseudogene	Gm13504	ENSMUST00000117490	processed_pseudogene		2	-1	39237441	316
ENSMUSG00000049551	protein_coding	Fzd9	ENSMUST00000062572	protein_coding	principal1	5	-1	135251230	2293
ENSMUSG00000033538	protein_coding	Casp4	ENSMUST00000159461	nonsense_mediated_decay		9	1	5321399	871
ENSMUSG00000091993	antisense	B930036N10Rik	ENSMUST00000181170	antisense		1	-1	171504111	3544
ENSMUSG00000081144	processed_pseudogene	Vmn2r-ps2	ENSMUST00000121053	processed_pseudogene		2	1	39274106	765
ENSMUSG00000033538	protein_coding	Casp4	ENSMUST00000163086	retained_intron		9	1	5323348	752
ENSMUSG00000107852	processed_pseudogene	Gm6227	ENSMUST00000205237	processed_pseudogene		6	-1	117473418	421
ENSMUSG00000091993	antisense	B930036N10Rik	ENSMUST00000165827	antisense		1	-1	171504111	1316
ENSMUSG00000052584	protein_coding	Serp2	ENSMUST00000064517	protein_coding	principal1	14	-1	76556672	748
ENSMUSG00000083401	unprocessed_pseudogene	Gm13506	ENSMUST00000120391	unprocessed_pseudogene		2	1	39395413	1083
ENSMUSG00000084754	lincRNA	Gm12532	ENSMUST00000148448	lincRNA		3	1	37182885	2684
ENSMUSG00000108020	lincRNA	6820426E19Rik	ENSMUST00000204274	lincRNA		6	1	117495235	1970
ENSMUSG00000052584	protein_coding	Serp2	ENSMUST00000228055	protein_coding		14	-1	76556702	705
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000078019	protein_coding	alternative2	15	1	6299788	3793
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000006838	protein_coding	principal1	9	1	108507706	2800
ENSMUSG00000081839	processed_pseudogene	Gm13454	ENSMUST00000118166	processed_pseudogene		2	-1	39525355	483
ENSMUSG00000106913	TEC	9430007M09Rik	ENSMUST00000201947	TEC		5	1	135264326	804
ENSMUSG00000038218	unprocessed_pseudogene	Gm9765	ENSMUST00000043170	unprocessed_pseudogene		1	1	171515233	321
ENSMUSG00000022136	protein_coding	Dnajc3	ENSMUST00000022734	protein_coding	principal1	14	1	118937976	5141
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000159046	protein_coding		15	1	6299813	368
ENSMUSG00000052584	protein_coding	Serp2	ENSMUST00000227076	nonsense_mediated_decay		14	-1	76556858	865
ENSMUSG00000084285	processed_pseudogene	Gm13451	ENSMUST00000117649	processed_pseudogene		2	-1	39558733	592
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000161040	protein_coding	alternative2	15	1	6299832	1098
ENSMUSG00000052584	protein_coding	Serp2	ENSMUST00000227957	retained_intron		14	-1	76556492	620
ENSMUSG00000082015	processed_pseudogene	Gm13452	ENSMUST00000120896	processed_pseudogene		2	1	39574630	1097
ENSMUSG00000052584	protein_coding	Serp2	ENSMUST00000228524	protein_coding		14	-1	76556889	318
ENSMUSG00000054488	lincRNA	Gm9946	ENSMUST00000162741	lincRNA		6	1	117559697	1580
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000162140	processed_transcript		15	1	6299868	1406
ENSMUSG00000054488	lincRNA	Gm9946	ENSMUST00000008011	lincRNA		6	1	117559697	1025
ENSMUSG00000054488	lincRNA	Gm9946	ENSMUST00000165995	lincRNA		6	1	117567672	384
ENSMUSG00000085441	unprocessed_pseudogene	Gm8289	ENSMUST00000144814	unprocessed_pseudogene		X	1	147742175	1182
ENSMUSG00000108203	processed_pseudogene	Gm43944	ENSMUST00000205220	processed_pseudogene		2	-1	39658971	120
ENSMUSG00000107785	lincRNA	Gm45083	ENSMUST00000205216	lincRNA		6	-1	117612570	712
ENSMUSG00000115220	lincRNA	Gm49768	ENSMUST00000227218	lincRNA		14	-1	118983760	673
ENSMUSG00000072494	protein_coding	Ppp1r3e	ENSMUST00000182700	processed_transcript		14	-1	54873312	644
ENSMUSG00000107699	TEC	Gm43970	ENSMUST00000204346	TEC		2	1	39723995	3605
ENSMUSG00000072494	protein_coding	Ppp1r3e	ENSMUST00000177403	protein_coding	principal1	14	-1	54877550	1957
ENSMUSG00000039990	protein_coding	Edrf1	ENSMUST00000051169	protein_coding	principal2	7	1	133637543	5424
ENSMUSG00000072494	protein_coding	Ppp1r3e	ENSMUST00000194094	retained_intron		14	-1	54876621	1025
ENSMUSG00000038352	protein_coding	Arl5c	ENSMUST00000042971	protein_coding	principal1	11	-1	97996181	1571
ENSMUSG00000083240	processed_pseudogene	Gm13453	ENSMUST00000118708	processed_pseudogene		2	-1	40127860	357
ENSMUSG00000072494	protein_coding	Ppp1r3e	ENSMUST00000168622	protein_coding	principal1	14	-1	54877538	1852
ENSMUSG00000039990	protein_coding	Edrf1	ENSMUST00000128901	protein_coding	alternative2	7	1	133637693	4380
ENSMUSG00000118556	processed_pseudogene	CT030159.1	ENSMUST00000238814	processed_pseudogene		13	-1	64322918	736
ENSMUSG00000038352	protein_coding	Arl5c	ENSMUST00000107563	protein_coding		11	-1	97995929	823
ENSMUSG00000039990	protein_coding	Edrf1	ENSMUST00000154795	retained_intron		7	1	133637861	506
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000080880	protein_coding	principal4	15	1	6386598	4663
ENSMUSG00000084171	processed_pseudogene	Gm13457	ENSMUST00000117885	processed_pseudogene		2	1	40177022	267
ENSMUSG00000039990	protein_coding	Edrf1	ENSMUST00000211072	retained_intron		7	1	133656657	1902
ENSMUSG00000028672	protein_coding	Hmgcl	ENSMUST00000030432	protein_coding	principal1	4	1	135946448	1418
ENSMUSG00000083398	processed_pseudogene	Gm13458	ENSMUST00000118239	processed_pseudogene		2	-1	40178632	367
ENSMUSG00000056128	lincRNA	Gm9991	ENSMUST00000070048	lincRNA		1	1	90675161	1207
ENSMUSG00000039990	protein_coding	Edrf1	ENSMUST00000138370	nonsense_mediated_decay		7	1	133657105	541
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000028220	protein_coding	principal1	2	-1	34826073	2030
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000038488	protein_coding	principal1	9	-1	45955258	4248
ENSMUSG00000039990	protein_coding	Edrf1	ENSMUST00000176661	protein_coding		7	1	133665926	771
ENSMUSG00000031775	protein_coding	Pllp	ENSMUST00000034227	protein_coding	principal1	8	-1	94696278	1926
ENSMUSG00000039990	protein_coding	Edrf1	ENSMUST00000137338	retained_intron		7	1	133667206	588
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000110663	protein_coding	alternative2	15	1	6386776	2754
ENSMUSG00000031775	protein_coding	Pllp	ENSMUST00000212555	processed_transcript		8	-1	94680082	954
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000113078	protein_coding	principal1	2	-1	34823181	1872
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000114573	protein_coding		9	-1	45954977	4012
ENSMUSG00000028766	protein_coding	Alpl	ENSMUST00000030551	protein_coding	principal1	4	-1	137796384	2522
ENSMUSG00000031775	protein_coding	Pllp	ENSMUST00000213043	protein_coding		8	-1	94678606	618
ENSMUSG00000028766	protein_coding	Alpl	ENSMUST00000133566	processed_transcript		4	-1	137769615	151
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000159033	protein_coding		9	-1	45941408	221
ENSMUSG00000028766	protein_coding	Alpl	ENSMUST00000138463	processed_transcript		4	-1	137796230	719
ENSMUSG00000029613	protein_coding	Eif2ak1	ENSMUST00000100487	protein_coding	principal1	5	1	143817788	4325
ENSMUSG00000028672	protein_coding	Hmgcl	ENSMUST00000134135	processed_transcript		4	1	135946465	1037
ENSMUSG00000110702	antisense	Gm45767	ENSMUST00000212778	antisense		8	1	94675606	4561
ENSMUSG00000028766	protein_coding	Alpl	ENSMUST00000133473	protein_coding		4	-1	137785371	472
ENSMUSG00000028672	protein_coding	Hmgcl	ENSMUST00000151879	processed_transcript		4	1	135948530	782
ENSMUSG00000028766	protein_coding	Alpl	ENSMUST00000153588	protein_coding		4	-1	137782191	604
ENSMUSG00000028672	protein_coding	Hmgcl	ENSMUST00000148613	processed_transcript		4	1	135959727	926
ENSMUSG00000029613	protein_coding	Eif2ak1	ENSMUST00000140013	retained_intron		5	1	143817831	1654
ENSMUSG00000028766	protein_coding	Alpl	ENSMUST00000143757	processed_transcript		4	-1	137769820	348
ENSMUSG00000028672	protein_coding	Hmgcl	ENSMUST00000135644	processed_transcript		4	1	135960332	685
ENSMUSG00000029613	protein_coding	Eif2ak1	ENSMUST00000154767	retained_intron		5	1	143817947	736
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000161812	protein_coding	alternative2	15	1	6386777	2710
ENSMUSG00000028766	protein_coding	Alpl	ENSMUST00000139951	protein_coding		4	-1	137766475	916
ENSMUSG00000026615	protein_coding	Eprs	ENSMUST00000192284	retained_intron		1	1	185363044	5638
ENSMUSG00000028766	protein_coding	Alpl	ENSMUST00000141451	processed_transcript		4	-1	137747147	606
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000160134	protein_coding	alternative2	15	1	6386779	1374
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000159490	protein_coding		15	1	6389050	393
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000160598	retained_intron		9	-1	45944631	628
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000162094	protein_coding		15	1	6390120	737
ENSMUSG00000105201	TEC	Gm43362	ENSMUST00000198192	TEC		3	-1	158036409	2470
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000160927	retained_intron		9	-1	45945033	817
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000163082	protein_coding		15	1	6422240	2034
ENSMUSG00000104222	lincRNA	Gm7292	ENSMUST00000194706	lincRNA		6	1	117716342	2527
ENSMUSG00000051065	protein_coding	Mb21d2	ENSMUST00000100023	protein_coding	principal1	16	-1	28929673	3055
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000161558	retained_intron		15	1	6423162	476
ENSMUSG00000104222	lincRNA	Gm7292	ENSMUST00000195277	lincRNA		6	1	117716473	995
ENSMUSG00000051065	protein_coding	Mb21d2	ENSMUST00000232571	processed_transcript		16	-1	28836367	1476
ENSMUSG00000075073	protein_coding	Olfr1256	ENSMUST00000111520	nonsense_mediated_decay		2	-1	89841133	1563
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000160618	nonsense_mediated_decay		9	-1	45946787	676
ENSMUSG00000116861	processed_pseudogene	Gm8253	ENSMUST00000232466	processed_pseudogene		16	-1	28951355	433
ENSMUSG00000075073	protein_coding	Olfr1256	ENSMUST00000213833	protein_coding	principal1	2	-1	89841555	6081
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000130063	lincRNA		X	-1	103623754	4275
ENSMUSG00000070868	protein_coding	Skint3	ENSMUST00000038455	protein_coding	principal3	4	1	112232245	3627
ENSMUSG00000022150	protein_coding	Dab2	ENSMUST00000110664	protein_coding	alternative2	15	1	6386748	4450
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000160670	retained_intron		9	-1	45947791	817
ENSMUSG00000075073	protein_coding	Olfr1256	ENSMUST00000215613	protein_coding	principal1	2	-1	89841133	4543
ENSMUSG00000070868	protein_coding	Skint3	ENSMUST00000170945	protein_coding	alternative2	4	1	112232245	3843
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000160138	protein_coding		9	-1	45948255	529
ENSMUSG00000075073	protein_coding	Olfr1256	ENSMUST00000099763	protein_coding	principal1	2	-1	89835943	921
ENSMUSG00000015001	protein_coding	Oc90	ENSMUST00000156996	protein_coding		15	-1	65901561	1608
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000236107	lincRNA		X	-1	103616835	2474
ENSMUSG00000089771	antisense	Gm16311	ENSMUST00000161939	antisense		15	-1	6309913	702
ENSMUSG00000081577	processed_pseudogene	Gm13455	ENSMUST00000118767	processed_pseudogene		2	1	40287162	517
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000162072	protein_coding		9	-1	45955181	1754
ENSMUSG00000099869	lincRNA	1700030F04Rik	ENSMUST00000188781	lincRNA		6	-1	117751769	617
ENSMUSG00000029610	protein_coding	Aimp2	ENSMUST00000031613	protein_coding	principal1	5	-1	143909839	1185
ENSMUSG00000099869	lincRNA	1700030F04Rik	ENSMUST00000190546	lincRNA		6	-1	117717263	485
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000162529	protein_coding		9	-1	45951831	667
ENSMUSG00000111834	processed_pseudogene	Gm40020	ENSMUST00000215677	processed_pseudogene		2	-1	85900544	1635
ENSMUSG00000099869	lincRNA	1700030F04Rik	ENSMUST00000187642	lincRNA		6	-1	117751769	418
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000161606	protein_coding		9	-1	45951772	661
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000156240	lincRNA		X	-1	103616954	2313
ENSMUSG00000029610	protein_coding	Aimp2	ENSMUST00000100483	protein_coding		5	-1	143909847	1073
ENSMUSG00000114664	TEC	Gm48639	ENSMUST00000225364	TEC		13	1	76198991	1876
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000162379	nonsense_mediated_decay		9	-1	45952004	621
ENSMUSG00000029610	protein_coding	Aimp2	ENSMUST00000128440	retained_intron		5	-1	143909784	752
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000161042	protein_coding		9	-1	45948307	316
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000237368	lincRNA		X	-1	103623790	3300
ENSMUSG00000029610	protein_coding	Aimp2	ENSMUST00000149473	retained_intron		5	-1	143909788	591
ENSMUSG00000027775	protein_coding	Mfsd1	ENSMUST00000029344	protein_coding	principal1	3	1	67582741	3011
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000037484	protein_coding	principal3	9	1	80066903	5111
ENSMUSG00000034908	protein_coding	Sidt2	ENSMUST00000160911	retained_intron		9	-1	45955234	1017
ENSMUSG00000051748	protein_coding	Wfdc21	ENSMUST00000070832	protein_coding	principal1	11	1	83746940	434
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000237493	lincRNA		X	-1	103608245	2416
ENSMUSG00000060477	protein_coding	Irak2	ENSMUST00000059286	protein_coding	principal3	6	1	113638467	3196
ENSMUSG00000071237	processed_pseudogene	Gemin6-ps	ENSMUST00000120444	processed_pseudogene		6	1	117808720	501
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000145803	lincRNA		X	-1	103616863	2478
ENSMUSG00000072679	lincRNA	D6Ertd474e	ENSMUST00000159793	lincRNA		6	1	143245888	493
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000091020	protein_coding		2	-1	34826235	1838
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000176640	protein_coding		9	1	80066936	1150
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000156211	lincRNA		X	-1	103623663	4215
ENSMUSG00000072679	lincRNA	D6Ertd474e	ENSMUST00000160188	lincRNA		6	1	143245888	683
ENSMUSG00000111329	antisense	A830035O19Rik	ENSMUST00000216147	antisense		9	1	45954101	1898
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000236231	lincRNA		X	-1	103616945	4019
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000164859	protein_coding	alternative2	9	1	80066973	3853
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000238083	lincRNA		X	-1	103622369	1752
ENSMUSG00000027775	protein_coding	Mfsd1	ENSMUST00000192776	processed_transcript		3	1	67584746	718
ENSMUSG00000072679	lincRNA	D6Ertd474e	ENSMUST00000161174	lincRNA		6	1	143245893	717
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000237053	lincRNA		X	-1	103623790	2025
ENSMUSG00000072679	lincRNA	D6Ertd474e	ENSMUST00000100817	lincRNA		6	1	143245893	2149
ENSMUSG00000075206	protein_coding	Olfr1024	ENSMUST00000099912	protein_coding	principal1	2	-1	85905052	984
ENSMUSG00000089840	protein_coding	Gm4491	ENSMUST00000159455	protein_coding	principal1	14	-1	57115883	1523
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000113077	protein_coding		2	-1	34826071	1670
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000125419	lincRNA		X	-1	103623754	689
ENSMUSG00000072679	lincRNA	D6Ertd474e	ENSMUST00000160951	lincRNA		6	1	143286050	516
ENSMUSG00000116746	processed_pseudogene	Gm18825	ENSMUST00000232227	processed_pseudogene		16	-1	73464823	1017
ENSMUSG00000086370	lincRNA	Ftx	ENSMUST00000123841	lincRNA		X	-1	103622500	673
ENSMUSG00000015001	protein_coding	Oc90	ENSMUST00000079776	protein_coding	alternative2	15	-1	65912254	1670
ENSMUSG00000083913	processed_pseudogene	Gm14219	ENSMUST00000120414	processed_pseudogene		2	-1	159456457	288
ENSMUSG00000029607	protein_coding	Ankrd61	ENSMUST00000079624	protein_coding	alternative2	5	-1	143895030	1720
ENSMUSG00000116806	processed_pseudogene	Gm49680	ENSMUST00000231349	processed_pseudogene		16	1	73484857	459
ENSMUSG00000082383	transcribed_processed_pseudogene	Gm9670	ENSMUST00000121201	transcribed_processed_pseudogene		X	1	103506812	540
ENSMUSG00000029607	protein_coding	Ankrd61	ENSMUST00000110717	protein_coding	principal3	5	-1	143895067	1498
ENSMUSG00000031779	protein_coding	Ccl22	ENSMUST00000034231	protein_coding	principal1	8	1	94745590	2216
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000113080	protein_coding	principal1	2	-1	34826230	1923
ENSMUSG00000082812	processed_pseudogene	Gm14860	ENSMUST00000120277	processed_pseudogene		X	1	103514922	429
ENSMUSG00000029607	protein_coding	Ankrd61	ENSMUST00000110718	protein_coding	alternative2	5	-1	143897685	1774
ENSMUSG00000058884	protein_coding	Olfr1025-ps1	ENSMUST00000213474	protein_coding	principal1	2	1	85915193	3578
ENSMUSG00000060477	protein_coding	Irak2	ENSMUST00000089023	protein_coding		6	1	113638488	1734
ENSMUSG00000116642	unprocessed_pseudogene	Gm18168	ENSMUST00000231958	unprocessed_pseudogene		16	-1	73604052	592
ENSMUSG00000075072	protein_coding	Olfr48	ENSMUST00000214428	protein_coding	principal1	2	-1	89848143	3848
ENSMUSG00000058884	protein_coding	Olfr1025-ps1	ENSMUST00000188749	protein_coding		2	1	85917927	921
ENSMUSG00000060477	protein_coding	Irak2	ENSMUST00000204091	retained_intron		6	1	113638501	631
ENSMUSG00000031779	protein_coding	Ccl22	ENSMUST00000156137	processed_transcript		8	1	94745680	409
ENSMUSG00000075072	protein_coding	Olfr48	ENSMUST00000216674	processed_transcript		2	-1	89848205	1907
ENSMUSG00000103206	processed_pseudogene	Gm8515	ENSMUST00000194852	processed_pseudogene		3	-1	67607781	576
ENSMUSG00000075072	protein_coding	Olfr48	ENSMUST00000099762	protein_coding	principal1	2	-1	89844971	906
ENSMUSG00000038209	protein_coding	Itln1	ENSMUST00000043094	protein_coding	principal1	1	-1	171535294	1141
ENSMUSG00000103606	processed_pseudogene	Gm412	ENSMUST00000193360	processed_pseudogene		3	-1	67620728	948
ENSMUSG00000038209	protein_coding	Itln1	ENSMUST00000168184	protein_coding		1	-1	171531733	422
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000113075	protein_coding		2	-1	34826201	2260
ENSMUSG00000102746	processed_pseudogene	Gm37601	ENSMUST00000194922	processed_pseudogene		3	-1	67684752	394
ENSMUSG00000028191	protein_coding	Bcl10	ENSMUST00000197842	retained_intron		3	1	145922804	2368
ENSMUSG00000060477	protein_coding	Irak2	ENSMUST00000089022	protein_coding	alternative2	6	1	113638528	2974
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000145180	processed_transcript		2	-1	34808663	320
ENSMUSG00000040856	protein_coding	Dlk1	ENSMUST00000056110	protein_coding	principal1	12	1	109452849	4653
ENSMUSG00000015001	protein_coding	Oc90	ENSMUST00000060522	protein_coding	principal3	15	-1	65912397	1909
ENSMUSG00000040055	protein_coding	Gjb6	ENSMUST00000039380	protein_coding	principal1	14	-1	57133611	2105
ENSMUSG00000042863	protein_coding	Olfr1026	ENSMUST00000219615	protein_coding	principal1	2	1	85921558	1465
ENSMUSG00000015001	protein_coding	Oc90	ENSMUST00000135442	protein_coding		15	-1	65892438	898
ENSMUSG00000042863	protein_coding	Olfr1026	ENSMUST00000217615	protein_coding	principal1	2	1	85921615	1538
ENSMUSG00000040055	protein_coding	Gjb6	ENSMUST00000224544	retained_intron		14	-1	57125221	1918
ENSMUSG00000042863	protein_coding	Olfr1026	ENSMUST00000056718	protein_coding	principal1	2	1	85923229	965
ENSMUSG00000040055	protein_coding	Gjb6	ENSMUST00000160703	protein_coding		14	-1	57133281	887
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000131534	processed_transcript		2	-1	34826311	1930
ENSMUSG00000015001	protein_coding	Oc90	ENSMUST00000147776	processed_transcript		15	-1	65889638	659
ENSMUSG00000040055	protein_coding	Gjb6	ENSMUST00000162931	processed_transcript		14	-1	57132059	201
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000145660	processed_transcript		2	-1	34826167	988
ENSMUSG00000060477	protein_coding	Irak2	ENSMUST00000204744	nonsense_mediated_decay		6	1	113638536	622
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000134323	processed_transcript		2	-1	34826217	1521
ENSMUSG00000028191	protein_coding	Bcl10	ENSMUST00000029842	protein_coding	principal1	3	1	145924262	1949
ENSMUSG00000060477	protein_coding	Irak2	ENSMUST00000155554	processed_transcript		6	1	113668850	542
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000201806	retained_intron		2	-1	34826207	4405
ENSMUSG00000082892	unprocessed_pseudogene	Olfr1027-ps1	ENSMUST00000122338	unprocessed_pseudogene		2	1	85932145	875
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000150865	processed_transcript		2	-1	34826022	807
ENSMUSG00000028191	protein_coding	Bcl10	ENSMUST00000198122	processed_transcript		3	1	145924357	660
ENSMUSG00000115726	protein_coding	Gm30083	ENSMUST00000227795	protein_coding	principal1	14	-1	34015182	2005
ENSMUSG00000060477	protein_coding	Irak2	ENSMUST00000113024	retained_intron		6	1	113669778	1887
ENSMUSG00000035949	protein_coding	Fbxw2	ENSMUST00000126051	processed_transcript		2	-1	34826215	852
ENSMUSG00000115726	protein_coding	Gm30083	ENSMUST00000227523	retained_intron		14	-1	34000724	666
ENSMUSG00000060477	protein_coding	Irak2	ENSMUST00000203381	retained_intron		6	1	113690745	573
ENSMUSG00000060477	protein_coding	Irak2	ENSMUST00000143948	processed_transcript		6	1	113692759	688
ENSMUSG00000111662	transcribed_processed_pseudogene	Gm7435	ENSMUST00000214039	processed_transcript		9	1	55938252	486
ENSMUSG00000040856	protein_coding	Dlk1	ENSMUST00000109844	protein_coding	principal1	12	1	109453455	1703
ENSMUSG00000111662	transcribed_processed_pseudogene	Gm7435	ENSMUST00000216003	transcribed_processed_pseudogene		9	1	55949986	2424
ENSMUSG00000107846	TEC	Gm43963	ENSMUST00000203466	TEC		6	-1	113679219	2488
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000085677	protein_coding	principal1	9	1	58129088	2725
ENSMUSG00000068220	protein_coding	Lgals1	ENSMUST00000089377	protein_coding	principal1	15	1	78926725	800
ENSMUSG00000108024	TEC	Gm43912	ENSMUST00000204352	TEC		6	1	113689855	538
ENSMUSG00000050211	protein_coding	Pla2g4e	ENSMUST00000136845	retained_intron		2	-1	120191214	4424
ENSMUSG00000068220	protein_coding	Lgals1	ENSMUST00000229159	nonsense_mediated_decay		15	1	78926726	628
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000034880	protein_coding	principal1	9	1	58129349	2993
ENSMUSG00000022061	protein_coding	Nkx3-1	ENSMUST00000022646	protein_coding	principal1	14	1	69190638	3195
ENSMUSG00000083451	processed_pseudogene	Gm11445	ENSMUST00000119101	processed_pseudogene		2	-1	159778207	532
ENSMUSG00000114530	processed_pseudogene	Gm48725	ENSMUST00000225618	processed_pseudogene		14	-1	57179160	183
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000145886	retained_intron		9	1	58063788	2001
ENSMUSG00000102999	TEC	Gm37762	ENSMUST00000194515	TEC		14	-1	69213129	3561
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000133287	protein_coding		9	1	58129501	583
ENSMUSG00000114754	processed_pseudogene	Gm8996	ENSMUST00000223699	processed_pseudogene		14	1	57217233	410
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000136338	protein_coding		9	1	58131897	509
ENSMUSG00000081215	processed_pseudogene	Gm11446	ENSMUST00000121319	processed_pseudogene		2	-1	159859290	866
ENSMUSG00000083661	processed_pseudogene	Gm11473	ENSMUST00000118980	processed_pseudogene		2	-1	167281777	359
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000134955	protein_coding		9	1	58134017	717
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000147134	protein_coding		9	1	58134075	877
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000175999	nonsense_mediated_decay		9	1	80067099	4706
ENSMUSG00000083329	transcribed_processed_pseudogene	Gm14220	ENSMUST00000118114	transcribed_processed_pseudogene		2	1	159978274	449
ENSMUSG00000050751	protein_coding	Pgbd5	ENSMUST00000172566	protein_coding		8	-1	124439658	2842
ENSMUSG00000086558	lincRNA	Gm14223	ENSMUST00000146060	lincRNA		2	-1	159947376	517
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000128378	protein_coding		9	1	58134535	630
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000165607	protein_coding	alternative2	9	1	80067493	3495
ENSMUSG00000050751	protein_coding	Pgbd5	ENSMUST00000140012	protein_coding	alternative2	8	-1	124434338	3222
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000150820	protein_coding		9	1	58134665	687
ENSMUSG00000085198	processed_transcript	4933416E03Rik	ENSMUST00000133091	processed_transcript		2	1	159947341	1126
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000177544	processed_transcript		9	1	80067817	341
ENSMUSG00000050751	protein_coding	Pgbd5	ENSMUST00000136892	protein_coding	principal2	8	-1	124393216	1739
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000176360	protein_coding		9	1	80092303	855
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000134450	protein_coding		9	1	58134810	471
ENSMUSG00000050751	protein_coding	Pgbd5	ENSMUST00000128312	processed_transcript		8	-1	124375546	407
ENSMUSG00000050751	protein_coding	Pgbd5	ENSMUST00000140126	retained_intron		8	-1	124375111	939
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000176607	processed_transcript		9	1	80103172	3319
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000128021	protein_coding		9	1	58079385	398
ENSMUSG00000050751	protein_coding	Pgbd5	ENSMUST00000052580	protein_coding	principal2	8	-1	124433936	2824
ENSMUSG00000042459	protein_coding	Bpifa2	ENSMUST00000048103	protein_coding	principal1	2	1	154008265	978
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000176648	protein_coding		9	1	80114022	596
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000136154	protein_coding		9	1	58079310	712
ENSMUSG00000042459	protein_coding	Bpifa2	ENSMUST00000145388	protein_coding		2	1	154008276	769
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000175910	processed_transcript		9	1	80114039	662
ENSMUSG00000042459	protein_coding	Bpifa2	ENSMUST00000136467	retained_intron		2	1	154013714	799
ENSMUSG00000070953	protein_coding	Rabepk	ENSMUST00000145903	protein_coding		2	-1	34799912	2968
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000176527	protein_coding		9	1	80123797	612
ENSMUSG00000042459	protein_coding	Bpifa2	ENSMUST00000132933	retained_intron		2	1	154014596	579
ENSMUSG00000036873	protein_coding	2410004B18Rik	ENSMUST00000039571	protein_coding	principal1	3	1	145938014	1547
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000175758	retained_intron		9	1	80136373	1445
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000175722	retained_intron		9	1	80139025	492
ENSMUSG00000070953	protein_coding	Rabepk	ENSMUST00000113086	protein_coding		2	-1	34799618	1106
ENSMUSG00000103980	processed_pseudogene	Gm37450	ENSMUST00000195218	processed_pseudogene		1	1	171541692	170
ENSMUSG00000034252	protein_coding	Senp6	ENSMUST00000176563	retained_intron		9	1	80142045	614
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000170397	protein_coding	principal1	9	1	58134075	3077
ENSMUSG00000070953	protein_coding	Rabepk	ENSMUST00000118108	protein_coding	principal1	2	-1	34799728	1431
ENSMUSG00000118490	processed_pseudogene	AL732466.1	ENSMUST00000238877	processed_pseudogene		2	1	154049689	671
ENSMUSG00000032327	protein_coding	Stra6	ENSMUST00000167479	protein_coding	principal1	9	1	58134665	2871
ENSMUSG00000070953	protein_coding	Rabepk	ENSMUST00000047963	nonsense_mediated_decay		2	-1	34795305	763
ENSMUSG00000036873	protein_coding	2410004B18Rik	ENSMUST00000134575	nonsense_mediated_decay		3	1	145938042	1644
ENSMUSG00000070953	protein_coding	Rabepk	ENSMUST00000141099	nonsense_mediated_decay		2	-1	34799864	542
ENSMUSG00000036873	protein_coding	2410004B18Rik	ENSMUST00000152783	nonsense_mediated_decay		3	1	145938190	514
ENSMUSG00000082590	processed_pseudogene	Gm14943	ENSMUST00000118056	processed_pseudogene		X	1	121816927	546
ENSMUSG00000096084	unprocessed_pseudogene	Gm21850	ENSMUST00000179792	unprocessed_pseudogene		2	1	154052269	359
ENSMUSG00000036873	protein_coding	2410004B18Rik	ENSMUST00000189656	retained_intron		3	1	145938236	338
ENSMUSG00000074219	bidirectional_promoter_lncRNA	Gm10644	ENSMUST00000098595	bidirectional_promoter_lncRNA		8	-1	83955205	2798
ENSMUSG00000036873	protein_coding	2410004B18Rik	ENSMUST00000190472	protein_coding		3	1	145938285	724
ENSMUSG00000081013	processed_pseudogene	Gm14497	ENSMUST00000119537	processed_pseudogene		2	-1	154087414	580
ENSMUSG00000084054	processed_pseudogene	Gm14945	ENSMUST00000119556	processed_pseudogene		X	1	121893424	1118
ENSMUSG00000036873	protein_coding	2410004B18Rik	ENSMUST00000138876	retained_intron		3	1	145938644	545
ENSMUSG00000070953	protein_coding	Rabepk	ENSMUST00000140663	nonsense_mediated_decay		2	-1	34799901	1223
ENSMUSG00000074219	bidirectional_promoter_lncRNA	Gm10644	ENSMUST00000238640	bidirectional_promoter_lncRNA		8	-1	83934057	958
ENSMUSG00000036873	protein_coding	2410004B18Rik	ENSMUST00000188034	protein_coding		3	1	145939086	540
ENSMUSG00000070953	protein_coding	Rabepk	ENSMUST00000144113	retained_intron		2	-1	34799754	600
ENSMUSG00000074219	bidirectional_promoter_lncRNA	Gm10644	ENSMUST00000238427	bidirectional_promoter_lncRNA		8	-1	83955144	496
ENSMUSG00000040856	protein_coding	Dlk1	ENSMUST00000109842	protein_coding		12	1	109453491	1129
ENSMUSG00000074219	bidirectional_promoter_lncRNA	Gm10644	ENSMUST00000238531	bidirectional_promoter_lncRNA		8	-1	83955343	609
ENSMUSG00000050211	protein_coding	Pla2g4e	ENSMUST00000090071	protein_coding	principal1	2	-1	120245335	4477
ENSMUSG00000084110	processed_pseudogene	Gm4992	ENSMUST00000120256	processed_pseudogene		X	1	121913227	768
ENSMUSG00000030966	protein_coding	Trim21	ENSMUST00000033264	protein_coding	principal1	7	-1	102565486	2793
ENSMUSG00000082840	processed_pseudogene	Gm16421	ENSMUST00000117616	processed_pseudogene		X	1	122100927	1557
ENSMUSG00000050211	protein_coding	Pla2g4e	ENSMUST00000127009	retained_intron		2	-1	120245082	4187
ENSMUSG00000090843	protein_coding	Heatr4	ENSMUST00000164935	protein_coding	principal1	12	-1	83984852	3038
ENSMUSG00000081095	processed_pseudogene	Gm14946	ENSMUST00000119859	processed_pseudogene		X	-1	122220145	296
ENSMUSG00000050211	protein_coding	Pla2g4e	ENSMUST00000152263	processed_transcript		2	-1	120245108	977
ENSMUSG00000030966	protein_coding	Trim21	ENSMUST00000106913	protein_coding	principal1	7	-1	102565445	2682
ENSMUSG00000087555	processed_transcript	Gm13997	ENSMUST00000155641	processed_transcript		2	-1	120245598	336
ENSMUSG00000106756	lincRNA	Gm32780	ENSMUST00000201402	lincRNA		5	1	76043098	540
ENSMUSG00000083537	processed_pseudogene	Gm14942	ENSMUST00000119642	processed_pseudogene		X	1	122347613	336
ENSMUSG00000040856	protein_coding	Dlk1	ENSMUST00000109843	protein_coding		12	1	109453491	1300
ENSMUSG00000030966	protein_coding	Trim21	ENSMUST00000209679	retained_intron		7	-1	102563836	666
ENSMUSG00000030966	protein_coding	Trim21	ENSMUST00000209907	retained_intron		7	-1	102564090	642
ENSMUSG00000107020	processed_pseudogene	Gm6051	ENSMUST00000201529	processed_pseudogene		5	-1	76060763	352
ENSMUSG00000030966	protein_coding	Trim21	ENSMUST00000210261	retained_intron		7	-1	102565446	634
ENSMUSG00000026615	protein_coding	Eprs	ENSMUST00000046514	protein_coding	principal1	1	1	185363044	4906
ENSMUSG00000055733	protein_coding	Nap1l3	ENSMUST00000079490	protein_coding	principal1	X	-1	122397401	2837
ENSMUSG00000045382	protein_coding	Cxcr4	ENSMUST00000052172	protein_coding	principal1	1	-1	128592290	1805
ENSMUSG00000045382	protein_coding	Cxcr4	ENSMUST00000142893	protein_coding		1	-1	128592293	902
ENSMUSG00000086452	processed_pseudogene	Gm14947	ENSMUST00000133704	processed_pseudogene		X	1	122452368	303
ENSMUSG00000026615	protein_coding	Eprs	ENSMUST00000192588	retained_intron		1	1	185363058	3912
ENSMUSG00000040856	protein_coding	Dlk1	ENSMUST00000109846	protein_coding		12	1	109453535	4106
ENSMUSG00000026615	protein_coding	Eprs	ENSMUST00000193788	retained_intron		1	1	185363132	3034
ENSMUSG00000083490	processed_pseudogene	Gm14940	ENSMUST00000119309	processed_pseudogene		X	1	122768869	495
ENSMUSG00000099403	processed_pseudogene	Gm29599	ENSMUST00000185285	processed_pseudogene		1	1	128750926	422
ENSMUSG00000026615	protein_coding	Eprs	ENSMUST00000191900	nonsense_mediated_decay		1	1	185363184	722
ENSMUSG00000040856	protein_coding	Dlk1	ENSMUST00000173539	protein_coding		12	1	109453655	3914
ENSMUSG00000050702	protein_coding	4930563M21Rik	ENSMUST00000060468	protein_coding	principal1	9	-1	55980932	792
ENSMUSG00000097283	lincRNA	Gm26686	ENSMUST00000181951	lincRNA		1	-1	128774421	3467
ENSMUSG00000040856	protein_coding	Dlk1	ENSMUST00000109841	protein_coding		12	1	109453660	879
ENSMUSG00000026615	protein_coding	Eprs	ENSMUST00000194157	retained_intron		1	1	185365471	2915
ENSMUSG00000094864	lincRNA	Gm17521	ENSMUST00000238266	lincRNA		X	-1	123029675	174
ENSMUSG00000026615	protein_coding	Eprs	ENSMUST00000195824	nonsense_mediated_decay		1	1	185367590	487
ENSMUSG00000050702	protein_coding	4930563M21Rik	ENSMUST00000217105	protein_coding		9	-1	56010550	1891
ENSMUSG00000040856	protein_coding	Dlk1	ENSMUST00000124293	protein_coding		12	1	109454195	1283
ENSMUSG00000094864	lincRNA	Gm17521	ENSMUST00000165345	lincRNA		X	-1	123029669	468
ENSMUSG00000026615	protein_coding	Eprs	ENSMUST00000192324	retained_intron		1	1	185367597	749
ENSMUSG00000040856	protein_coding	Dlk1	ENSMUST00000173812	protein_coding		12	1	109459843	483
ENSMUSG00000026615	protein_coding	Eprs	ENSMUST00000192049	retained_intron		1	1	185399658	3882
ENSMUSG00000081664	processed_pseudogene	Gm15544	ENSMUST00000118776	processed_pseudogene		7	1	80429210	1531
ENSMUSG00000000976	protein_coding	Heatr6	ENSMUST00000001002	protein_coding	principal1	11	1	83753696	5614
ENSMUSG00000032743	protein_coding	D430042O09Rik	ENSMUST00000124223	protein_coding	alternative2	7	1	125707888	5874
ENSMUSG00000029233	protein_coding	Srd5a3	ENSMUST00000138699	retained_intron		5	1	76140271	2220
ENSMUSG00000079450	protein_coding	Cldn34c1	ENSMUST00000113343	protein_coding	alternative2	X	1	123103495	3301
ENSMUSG00000032743	protein_coding	D430042O09Rik	ENSMUST00000069660	protein_coding	principal2	7	1	125707915	6148
ENSMUSG00000079450	protein_coding	Cldn34c1	ENSMUST00000153946	processed_transcript		X	1	123103535	1111
ENSMUSG00000024134	protein_coding	Six2	ENSMUST00000163568	protein_coding	principal1	17	-1	85688274	2119
ENSMUSG00000079450	protein_coding	Cldn34c1	ENSMUST00000149445	processed_transcript		X	1	123103554	1787
ENSMUSG00000075555	processed_transcript	Gm10863	ENSMUST00000131710	antisense		15	1	79166041	472
ENSMUSG00000075555	processed_transcript	Gm10863	ENSMUST00000130745	antisense		15	1	79166058	438
ENSMUSG00000032743	protein_coding	D430042O09Rik	ENSMUST00000205723	retained_intron		7	1	125707917	10079
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000110232	protein_coding	principal3	2	-1	131063814	3165
ENSMUSG00000032743	protein_coding	D430042O09Rik	ENSMUST00000148701	protein_coding		7	1	125707991	355
ENSMUSG00000075555	processed_transcript	Gm10863	ENSMUST00000147620	antisense		15	1	79166066	776
ENSMUSG00000024134	protein_coding	Six2	ENSMUST00000024947	protein_coding	principal1	17	-1	85688254	1812
ENSMUSG00000079450	protein_coding	Cldn34c1	ENSMUST00000113348	protein_coding	principal3	X	1	123103559	3281
ENSMUSG00000000976	protein_coding	Heatr6	ENSMUST00000125831	processed_transcript		11	1	83753714	4067
ENSMUSG00000075555	processed_transcript	Gm10863	ENSMUST00000144651	antisense		15	1	79166066	435
ENSMUSG00000079450	protein_coding	Cldn34c1	ENSMUST00000139733	processed_transcript		X	1	123103568	543
ENSMUSG00000000976	protein_coding	Heatr6	ENSMUST00000125602	processed_transcript		11	1	83754029	357
ENSMUSG00000117422	lincRNA	CJ186046Rik	ENSMUST00000235073	lincRNA		17	1	85693629	1834
ENSMUSG00000075555	processed_transcript	Gm10863	ENSMUST00000229207	lincRNA		15	1	79172720	603
ENSMUSG00000079450	protein_coding	Cldn34c1	ENSMUST00000169445	protein_coding	principal3	X	1	123117567	705
ENSMUSG00000092232	protein_coding	Gm20521	ENSMUST00000134077	protein_coding	principal1	14	1	54883441	1245
ENSMUSG00000000976	protein_coding	Heatr6	ENSMUST00000127428	retained_intron		11	1	83760688	709
ENSMUSG00000075555	processed_transcript	Gm10863	ENSMUST00000148028	antisense		15	1	79209311	905
ENSMUSG00000100345	lincRNA	Gm29418	ENSMUST00000186162	lincRNA		17	-1	85824044	647
ENSMUSG00000105337	lincRNA	1700094M23Rik	ENSMUST00000198047	lincRNA		3	-1	153182815	675
ENSMUSG00000000976	protein_coding	Heatr6	ENSMUST00000136572	processed_transcript		11	1	83774424	522
ENSMUSG00000036466	protein_coding	Megf11	ENSMUST00000093829	protein_coding		9	1	64385626	3652
ENSMUSG00000105337	lincRNA	1700094M23Rik	ENSMUST00000197695	lincRNA		3	-1	153175410	695
ENSMUSG00000032743	protein_coding	D430042O09Rik	ENSMUST00000122337	processed_transcript		7	1	125786255	3736
ENSMUSG00000105298	processed_pseudogene	Cldn25-ps	ENSMUST00000197641	processed_pseudogene		9	-1	49048294	693
ENSMUSG00000059743	protein_coding	Fdps	ENSMUST00000196709	protein_coding	principal1	3	-1	89101888	1382
ENSMUSG00000095005	lincRNA	Astx6	ENSMUST00000180281	lincRNA		X	-1	123213303	1150
ENSMUSG00000032743	protein_coding	D430042O09Rik	ENSMUST00000205462	retained_intron		7	1	125829667	4185
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000208069	processed_transcript		9	1	108507711	1314
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000132436	retained_intron		2	-1	131063569	3574
ENSMUSG00000032743	protein_coding	D430042O09Rik	ENSMUST00000132204	protein_coding		7	1	125860682	655
ENSMUSG00000059743	protein_coding	Fdps	ENSMUST00000081848	protein_coding	principal1	3	-1	89101959	1237
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000208102	processed_transcript		9	1	108507733	415
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000135149	protein_coding		2	-1	131056367	2062
ENSMUSG00000057207	protein_coding	Olfr1028	ENSMUST00000080698	protein_coding	principal1	2	1	85950437	3474
ENSMUSG00000036466	protein_coding	Megf11	ENSMUST00000068967	protein_coding	principal5	9	1	64385686	6680
ENSMUSG00000091821	TEC	Srsx	ENSMUST00000171714	TEC		X	-1	123222481	1083
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000207810	protein_coding		9	1	108508056	1052
ENSMUSG00000032743	protein_coding	D430042O09Rik	ENSMUST00000155059	retained_intron		7	1	125865271	671
ENSMUSG00000059743	protein_coding	Fdps	ENSMUST00000196254	protein_coding		3	-1	89095679	722
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000183552	nonsense_mediated_decay		2	-1	131063545	2765
ENSMUSG00000021706	protein_coding	Zfyve16	ENSMUST00000022217	protein_coding	principal1	13	-1	92530868	6150
ENSMUSG00000059743	protein_coding	Fdps	ENSMUST00000200433	retained_intron		3	-1	89095983	555
ENSMUSG00000095034	lincRNA	Gm17577	ENSMUST00000238282	lincRNA		X	-1	123246913	174
ENSMUSG00000029233	protein_coding	Srd5a3	ENSMUST00000031143	protein_coding	principal2	5	1	76140271	1747
ENSMUSG00000095034	lincRNA	Gm17577	ENSMUST00000179916	lincRNA		X	-1	123246907	468
ENSMUSG00000059743	protein_coding	Fdps	ENSMUST00000196921	protein_coding		3	-1	89101315	893
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000141201	retained_intron		9	1	108508058	2615
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000052104	protein_coding	alternative2	2	-1	131063814	2795
ENSMUSG00000089682	protein_coding	Bcl2l2	ENSMUST00000022806	protein_coding	principal1	14	1	54883377	3509
ENSMUSG00000047369	protein_coding	Dnah14	ENSMUST00000208001	protein_coding	alternative2	1	1	181576559	13696
ENSMUSG00000029233	protein_coding	Srd5a3	ENSMUST00000149222	processed_transcript		5	1	76140306	326
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000144253	retained_intron		9	1	108508058	2471
ENSMUSG00000059743	protein_coding	Fdps	ENSMUST00000199668	protein_coding		3	-1	89101852	482
ENSMUSG00000059873	protein_coding	Olfr1029	ENSMUST00000217244	protein_coding	principal1	2	1	85973895	3743
ENSMUSG00000059873	protein_coding	Olfr1029	ENSMUST00000082191	protein_coding	principal1	2	1	85975213	1061
ENSMUSG00000059743	protein_coding	Fdps	ENSMUST00000198239	retained_intron		3	-1	89101891	2953
ENSMUSG00000036466	protein_coding	Megf11	ENSMUST00000144383	retained_intron		9	1	64501601	3474
ENSMUSG00000021706	protein_coding	Zfyve16	ENSMUST00000156586	retained_intron		13	-1	92517074	3146
ENSMUSG00000089682	protein_coding	Bcl2l2	ENSMUST00000131243	retained_intron		14	1	54883381	399
ENSMUSG00000086517	antisense	Gm12534	ENSMUST00000147691	antisense		3	1	37231333	469
ENSMUSG00000029233	protein_coding	Srd5a3	ENSMUST00000152642	protein_coding		5	1	76140700	351
ENSMUSG00000036466	protein_coding	Megf11	ENSMUST00000148449	retained_intron		9	1	64385683	2942
ENSMUSG00000021706	protein_coding	Zfyve16	ENSMUST00000136135	retained_intron		13	-1	92509596	929
ENSMUSG00000089682	protein_coding	Bcl2l2	ENSMUST00000172844	protein_coding		14	1	54883456	498
ENSMUSG00000047369	protein_coding	Dnah14	ENSMUST00000238412	protein_coding	principal5	1	1	181581953	13791
ENSMUSG00000021706	protein_coding	Zfyve16	ENSMUST00000154850	processed_transcript		13	-1	92521658	783
ENSMUSG00000036466	protein_coding	Megf11	ENSMUST00000118485	protein_coding	alternative1	9	1	64385626	3944
ENSMUSG00000029233	protein_coding	Srd5a3	ENSMUST00000127278	protein_coding		5	1	76140730	628
ENSMUSG00000089682	protein_coding	Bcl2l2	ENSMUST00000133397	protein_coding		14	1	54883504	3813
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000134742	retained_intron		2	-1	131056481	2228
ENSMUSG00000029233	protein_coding	Srd5a3	ENSMUST00000113507	protein_coding	alternative2	5	1	76146637	1358
ENSMUSG00000036466	protein_coding	Megf11	ENSMUST00000153934	processed_transcript		9	1	64693781	865
ENSMUSG00000009350	protein_coding	Mpo	ENSMUST00000020779	protein_coding	principal1	11	1	87793581	2750
ENSMUSG00000089682	protein_coding	Bcl2l2	ENSMUST00000227108	protein_coding		14	1	54883507	645
ENSMUSG00000047369	protein_coding	Dnah14	ENSMUST00000193365	processed_transcript		1	1	181653379	802
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000184921	nonsense_mediated_decay		2	-1	131054526	656
ENSMUSG00000036466	protein_coding	Megf11	ENSMUST00000147388	processed_transcript		9	1	64546899	357
ENSMUSG00000046957	protein_coding	Spz1	ENSMUST00000050658	protein_coding	principal1	13	-1	92576172	1537
ENSMUSG00000029233	protein_coding	Srd5a3	ENSMUST00000113506	protein_coding	alternative2	5	1	76147961	1241
ENSMUSG00000047369	protein_coding	Dnah14	ENSMUST00000194470	processed_transcript		1	1	181653405	472
ENSMUSG00000036466	protein_coding	Megf11	ENSMUST00000124881	protein_coding		9	1	64660459	771
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000149625	processed_transcript		2	-1	131054516	736
ENSMUSG00000027718	protein_coding	Il21	ENSMUST00000029273	protein_coding	principal3	3	-1	37232618	3072
ENSMUSG00000009350	protein_coding	Mpo	ENSMUST00000143021	protein_coding		11	1	87793795	806
ENSMUSG00000029233	protein_coding	Srd5a3	ENSMUST00000124217	retained_intron		5	1	76152769	1872
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000127343	processed_transcript		2	-1	131054059	548
ENSMUSG00000036466	protein_coding	Megf11	ENSMUST00000148963	processed_transcript		9	1	64501336	425
ENSMUSG00000009350	protein_coding	Mpo	ENSMUST00000121303	protein_coding	principal1	11	1	87794209	2409
ENSMUSG00000027718	protein_coding	Il21	ENSMUST00000161015	protein_coding	alternative2	3	-1	37232565	529
ENSMUSG00000036466	protein_coding	Megf11	ENSMUST00000164113	protein_coding		9	1	64385626	6018
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000132071	retained_intron		2	-1	131054529	676
ENSMUSG00000027718	protein_coding	Il21	ENSMUST00000196943	retained_intron		3	-1	37232636	2335
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000147333	protein_coding		2	-1	131063513	1117
ENSMUSG00000009350	protein_coding	Mpo	ENSMUST00000107930	nonsense_mediated_decay		11	1	87795203	648
ENSMUSG00000027318	protein_coding	Adam33	ENSMUST00000124481	retained_intron		2	-1	131063543	656
ENSMUSG00000115345	lincRNA	Gm33497	ENSMUST00000228112	lincRNA		15	1	35200804	1762
ENSMUSG00000009350	protein_coding	Mpo	ENSMUST00000146650	protein_coding		11	1	87802538	640
ENSMUSG00000047369	protein_coding	Dnah14	ENSMUST00000097446	retained_intron		1	1	181738988	1224
ENSMUSG00000021226	protein_coding	Acot2	ENSMUST00000021649	protein_coding	principal1	12	1	83987861	2196
ENSMUSG00000041679	protein_coding	Lrrc29	ENSMUST00000209964	nonsense_mediated_decay		8	-1	105326278	2000
ENSMUSG00000104964	TEC	4930597L12Rik	ENSMUST00000196286	TEC		3	-1	153474654	911
ENSMUSG00000101523	processed_pseudogene	Csnk2a3	ENSMUST00000190422	processed_pseudogene		1	1	156524012	2633
ENSMUSG00000104998	TEC	Gm43822	ENSMUST00000200285	TEC		3	1	37232867	476
ENSMUSG00000041679	protein_coding	Lrrc29	ENSMUST00000210801	protein_coding		8	-1	105326274	3830
ENSMUSG00000009350	protein_coding	Mpo	ENSMUST00000167903	retained_intron		11	1	87803117	542
ENSMUSG00000095872	protein_coding	Gm15128	ENSMUST00000112814	protein_coding	principal1	X	1	147765991	2027
ENSMUSG00000106024	TEC	A530083M17Rik	ENSMUST00000199877	TEC		3	-1	153312745	3376
ENSMUSG00000087397	antisense	Rapgef3os2	ENSMUST00000124374	antisense		15	1	97766549	920
ENSMUSG00000041679	protein_coding	Lrrc29	ENSMUST00000211199	nonsense_mediated_decay		8	-1	105326259	2416
ENSMUSG00000095872	protein_coding	Gm15128	ENSMUST00000178833	protein_coding	principal1	X	1	147789728	1350
ENSMUSG00000086601	antisense	Rapgef3os1	ENSMUST00000149373	antisense		15	1	97760408	483
ENSMUSG00000085872	antisense	Gm11505	ENSMUST00000130442	antisense		11	-1	87801144	737
ENSMUSG00000047369	protein_coding	Dnah14	ENSMUST00000160345	retained_intron		1	1	181741036	1986
ENSMUSG00000041679	protein_coding	Lrrc29	ENSMUST00000210412	protein_coding	principal1	8	-1	105326259	2304
ENSMUSG00000083970	processed_pseudogene	Gm15081	ENSMUST00000119794	processed_pseudogene		X	1	147927646	844
ENSMUSG00000047369	protein_coding	Dnah14	ENSMUST00000160793	processed_transcript		1	1	181742740	489
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000154324	retained_intron		9	1	108508058	1643
ENSMUSG00000041679	protein_coding	Lrrc29	ENSMUST00000070508	protein_coding		8	-1	105326276	1922
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000207862	protein_coding		9	1	108508059	572
ENSMUSG00000047369	protein_coding	Dnah14	ENSMUST00000195458	protein_coding		1	1	181806001	321
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000208581	protein_coding		9	1	108508059	544
ENSMUSG00000047369	protein_coding	Dnah14	ENSMUST00000192602	protein_coding		1	1	181809055	400
ENSMUSG00000072949	protein_coding	Acot1	ENSMUST00000168120	protein_coding	principal1	12	1	84009490	2272
ENSMUSG00000047369	protein_coding	Dnah14	ENSMUST00000195808	retained_intron		1	1	181813458	1999
ENSMUSG00000022330	protein_coding	Osr2	ENSMUST00000226838	processed_transcript		15	1	35296098	1231
ENSMUSG00000103100	TEC	Gm37664	ENSMUST00000194607	TEC		1	-1	181690242	3813
ENSMUSG00000022330	protein_coding	Osr2	ENSMUST00000227655	retained_intron		15	1	35296098	2761
ENSMUSG00000072949	protein_coding	Acot1	ENSMUST00000222862	processed_transcript		12	1	84010135	801
ENSMUSG00000072931	protein_coding	Gm15080	ENSMUST00000112804	protein_coding	principal1	X	1	147992993	2029
ENSMUSG00000052544	protein_coding	St6galnac3	ENSMUST00000200397	protein_coding	principal1	3	-1	153725174	8169
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000208162	nonsense_mediated_decay		9	1	108508059	599
ENSMUSG00000072949	protein_coding	Acot1	ENSMUST00000222591	retained_intron		12	1	84012864	2613
ENSMUSG00000052544	protein_coding	St6galnac3	ENSMUST00000199707	protein_coding		3	-1	153225783	416
ENSMUSG00000072949	protein_coding	Acot1	ENSMUST00000220901	protein_coding		12	1	84014544	622
ENSMUSG00000080046	unprocessed_pseudogene	Gm15108	ENSMUST00000116160	unprocessed_pseudogene		X	1	148055249	803
ENSMUSG00000052544	protein_coding	St6galnac3	ENSMUST00000064460	protein_coding		3	-1	153725113	588
ENSMUSG00000052544	protein_coding	St6galnac3	ENSMUST00000200576	retained_intron		3	-1	153509742	866
ENSMUSG00000083809	unprocessed_pseudogene	Gm15110	ENSMUST00000117545	unprocessed_pseudogene		X	1	148059921	881
ENSMUSG00000052544	protein_coding	St6galnac3	ENSMUST00000198775	retained_intron		3	-1	153720996	437
ENSMUSG00000105023	sense_intronic	1700012D16Rik	ENSMUST00000197231	sense_intronic		3	-1	153298649	577
ENSMUSG00000094643	processed_pseudogene	Gm8303	ENSMUST00000178371	processed_pseudogene		X	1	148108570	1762
ENSMUSG00000104908	sense_intronic	1700015C17Rik	ENSMUST00000197297	sense_intronic		3	-1	153478210	239
ENSMUSG00000028011	protein_coding	Tdo2	ENSMUST00000029645	protein_coding	principal1	3	-1	81976202	3431
ENSMUSG00000022330	protein_coding	Osr2	ENSMUST00000022952	protein_coding		15	1	35296098	1724
ENSMUSG00000031803	protein_coding	B3gnt3	ENSMUST00000034260	protein_coding	principal1	8	-1	71701789	3055
ENSMUSG00000084776	lincRNA	Gm14951	ENSMUST00000143622	lincRNA		X	1	123253138	570
ENSMUSG00000022330	protein_coding	Osr2	ENSMUST00000228684	processed_transcript		15	1	35296111	579
ENSMUSG00000028011	protein_coding	Tdo2	ENSMUST00000151089	processed_transcript		3	-1	81964083	612
ENSMUSG00000022330	protein_coding	Osr2	ENSMUST00000228152	protein_coding	principal1	15	1	35300300	1324
ENSMUSG00000096362	processed_pseudogene	Rps12-ps21	ENSMUST00000178172	processed_pseudogene		X	1	123285044	402
ENSMUSG00000110438	processed_pseudogene	Gm45756	ENSMUST00000212491	processed_pseudogene		8	1	71695608	407
ENSMUSG00000028011	protein_coding	Tdo2	ENSMUST00000193879	protein_coding		3	-1	81976202	1616
ENSMUSG00000028011	protein_coding	Tdo2	ENSMUST00000137974	retained_intron		3	-1	81964035	652
ENSMUSG00000113844	processed_pseudogene	Gm47943	ENSMUST00000221543	processed_pseudogene		12	1	84023808	280
ENSMUSG00000110569	processed_pseudogene	Gm18860	ENSMUST00000212029	processed_pseudogene		8	-1	71704968	764
ENSMUSG00000004880	protein_coding	Lbr	ENSMUST00000005003	protein_coding	principal1	1	-1	181842379	3510
ENSMUSG00000116668	processed_pseudogene	Gm49568	ENSMUST00000231785	processed_pseudogene		16	-1	84893832	1171
ENSMUSG00000004880	protein_coding	Lbr	ENSMUST00000192075	retained_intron		1	-1	181820542	2715
ENSMUSG00000004880	protein_coding	Lbr	ENSMUST00000194415	protein_coding		1	-1	181828886	606
ENSMUSG00000004880	protein_coding	Lbr	ENSMUST00000194302	retained_intron		1	-1	181829154	569
ENSMUSG00000024056	protein_coding	Ndc80	ENSMUST00000024851	protein_coding	principal1	17	-1	71526857	2201
ENSMUSG00000022415	protein_coding	Syngr1	ENSMUST00000009728	protein_coding	alternative1	15	1	80091334	819
ENSMUSG00000025469	protein_coding	Msx3	ENSMUST00000055353	protein_coding		7	-1	140049089	2356
ENSMUSG00000004880	protein_coding	Lbr	ENSMUST00000193030	protein_coding		1	-1	181843046	648
ENSMUSG00000084001	unprocessed_pseudogene	Gm15113	ENSMUST00000119280	unprocessed_pseudogene		X	1	148379234	836
ENSMUSG00000024056	protein_coding	Ndc80	ENSMUST00000233552	processed_transcript		17	-1	71513108	1454
ENSMUSG00000024056	protein_coding	Ndc80	ENSMUST00000232863	protein_coding		17	-1	71526807	2009
ENSMUSG00000114727	processed_pseudogene	Gm47269	ENSMUST00000225788	processed_pseudogene		13	1	59688371	421
ENSMUSG00000004880	protein_coding	Lbr	ENSMUST00000191878	protein_coding		1	-1	181842361	669
ENSMUSG00000004880	protein_coding	Lbr	ENSMUST00000195299	protein_coding		1	-1	181842859	384
ENSMUSG00000024056	protein_coding	Ndc80	ENSMUST00000233750	nonsense_mediated_decay		17	-1	71526790	3847
ENSMUSG00000025469	protein_coding	Msx3	ENSMUST00000172775	protein_coding	principal1	7	-1	140049088	2070
ENSMUSG00000024056	protein_coding	Ndc80	ENSMUST00000233011	retained_intron		17	-1	71526804	1852
ENSMUSG00000004880	protein_coding	Lbr	ENSMUST00000193028	protein_coding		1	-1	181842326	237
ENSMUSG00000072930	protein_coding	Gm15107	ENSMUST00000112796	protein_coding	principal1	X	1	148180724	2028
ENSMUSG00000022415	protein_coding	Syngr1	ENSMUST00000009727	protein_coding	principal4	15	1	80091344	4180
ENSMUSG00000022415	protein_coding	Syngr1	ENSMUST00000143928	protein_coding		15	1	80097870	479
ENSMUSG00000072929	unprocessed_pseudogene	Gm15109	ENSMUST00000133085	unprocessed_pseudogene		X	1	148290866	2026
ENSMUSG00000096453	processed_pseudogene	Gm8320	ENSMUST00000177584	processed_pseudogene		X	1	148427884	1762
ENSMUSG00000022415	protein_coding	Syngr1	ENSMUST00000135727	protein_coding		15	1	80115473	576
ENSMUSG00000081533	unprocessed_pseudogene	Gm15111	ENSMUST00000122142	unprocessed_pseudogene		X	1	148374561	878
ENSMUSG00000055994	protein_coding	Nod2	ENSMUST00000118370	protein_coding	principal1	8	1	88647315	4653
ENSMUSG00000049902	protein_coding	4921517D22Rik	ENSMUST00000061597	protein_coding	principal1	13	-1	59694108	3149
ENSMUSG00000114321	processed_pseudogene	Gm8971	ENSMUST00000223673	processed_pseudogene		14	1	57363385	349
ENSMUSG00000049902	protein_coding	4921517D22Rik	ENSMUST00000225373	nonsense_mediated_decay		13	-1	59694102	956
ENSMUSG00000055994	protein_coding	Nod2	ENSMUST00000109634	protein_coding		8	1	88651341	4666
ENSMUSG00000079395	protein_coding	Gm15114	ENSMUST00000112788	protein_coding	principal1	X	1	148488949	1974
ENSMUSG00000055994	protein_coding	Nod2	ENSMUST00000054324	protein_coding		8	1	88647315	4719
ENSMUSG00000055994	protein_coding	Nod2	ENSMUST00000124091	retained_intron		8	1	88647384	2602
ENSMUSG00000082856	unprocessed_pseudogene	Gm15106	ENSMUST00000119691	unprocessed_pseudogene		X	1	148543504	821
ENSMUSG00000084112	unprocessed_pseudogene	Gm15112	ENSMUST00000120152	unprocessed_pseudogene		X	1	148548192	860
ENSMUSG00000060036	protein_coding	Rpl3	ENSMUST00000081650	protein_coding	principal1	15	-1	80083406	1351
ENSMUSG00000095627	processed_pseudogene	Gm8331	ENSMUST00000178433	processed_pseudogene		X	1	148596836	1762
ENSMUSG00000101223	lincRNA	4930568A12Rik	ENSMUST00000188292	lincRNA		1	-1	34485611	926
ENSMUSG00000101223	lincRNA	4930568A12Rik	ENSMUST00000186117	lincRNA		1	-1	34485933	498
ENSMUSG00000060036	protein_coding	Rpl3	ENSMUST00000230985	protein_coding		15	-1	80080481	460
ENSMUSG00000021947	protein_coding	Cryl1	ENSMUST00000022517	protein_coding	principal1	14	-1	57398529	1497
ENSMUSG00000112291	lincRNA	Gm48276	ENSMUST00000218963	lincRNA		10	-1	76730273	2385
ENSMUSG00000022194	protein_coding	Pabpn1	ENSMUST00000140691	protein_coding		14	1	54892500	680
ENSMUSG00000042489	protein_coding	Clspn	ENSMUST00000048391	protein_coding	principal2	4	1	126556935	5027
ENSMUSG00000060036	protein_coding	Rpl3	ENSMUST00000188025	retained_intron		15	-1	80082583	1781
ENSMUSG00000107019	TEC	Gm43682	ENSMUST00000202150	TEC		5	1	93176970	2090
ENSMUSG00000042489	protein_coding	Clspn	ENSMUST00000147675	protein_coding		4	1	126556995	608
ENSMUSG00000060036	protein_coding	Rpl3	ENSMUST00000187578	retained_intron		15	-1	80083353	1877
ENSMUSG00000060036	protein_coding	Rpl3	ENSMUST00000187832	nonsense_mediated_decay		15	-1	80083333	824
ENSMUSG00000042489	protein_coding	Clspn	ENSMUST00000123695	processed_transcript		4	1	126557005	2756
ENSMUSG00000022194	protein_coding	Pabpn1	ENSMUST00000116476	protein_coding	alternative2	14	1	54894148	1761
ENSMUSG00000113475	protein_coding	Gm49366	ENSMUST00000221229	protein_coding	principal1	12	1	84038935	429
ENSMUSG00000060036	protein_coding	Rpl3	ENSMUST00000185306	protein_coding		15	-1	80091868	816
ENSMUSG00000035232	protein_coding	Pdk3	ENSMUST00000045748	protein_coding	principal1	X	-1	93832201	2115
ENSMUSG00000042489	protein_coding	Clspn	ENSMUST00000129795	protein_coding	alternative2	4	1	126560278	785
ENSMUSG00000021947	protein_coding	Cryl1	ENSMUST00000223986	processed_transcript		14	-1	57398511	859
ENSMUSG00000100623	processed_pseudogene	Gm29428	ENSMUST00000190086	processed_pseudogene		1	1	130195980	409
ENSMUSG00000021947	protein_coding	Cryl1	ENSMUST00000224292	processed_transcript		14	-1	57398456	534
ENSMUSG00000060036	protein_coding	Rpl3	ENSMUST00000185928	retained_intron		15	-1	80083337	614
ENSMUSG00000103281	TEC	Gm37278	ENSMUST00000191619	TEC		1	1	129943162	2872
ENSMUSG00000042489	protein_coding	Clspn	ENSMUST00000126512	protein_coding	alternative2	4	1	126566555	1160
ENSMUSG00000097762	antisense	4732463B04Rik	ENSMUST00000180751	antisense		12	-1	84053807	2932
ENSMUSG00000035232	protein_coding	Pdk3	ENSMUST00000134502	processed_transcript		X	-1	93789325	607
ENSMUSG00000021947	protein_coding	Cryl1	ENSMUST00000225765	processed_transcript		14	-1	57398496	899
ENSMUSG00000035232	protein_coding	Pdk3	ENSMUST00000154717	processed_transcript		X	-1	93769120	392
ENSMUSG00000042489	protein_coding	Clspn	ENSMUST00000146944	processed_transcript		4	1	126572415	598
ENSMUSG00000117501	lincRNA	Gm30117	ENSMUST00000234707	lincRNA		17	-1	85928579	937
ENSMUSG00000114952	processed_pseudogene	Gm29717	ENSMUST00000225457	processed_pseudogene		14	-1	57385250	351
ENSMUSG00000094122	processed_pseudogene	Rpl31-ps9	ENSMUST00000086596	processed_pseudogene		1	-1	129801764	378
ENSMUSG00000042489	protein_coding	Clspn	ENSMUST00000128202	processed_transcript		4	1	126581319	687
ENSMUSG00000022194	protein_coding	Pabpn1	ENSMUST00000022808	protein_coding	principal2	14	1	54894148	1030
ENSMUSG00000110957	processed_pseudogene	Gm7439	ENSMUST00000214053	processed_pseudogene		9	1	56021340	835
ENSMUSG00000052392	protein_coding	Acot4	ENSMUST00000021652	protein_coding	principal1	12	1	84038379	6203
ENSMUSG00000105991	lincRNA	1700042D02Rik	ENSMUST00000198232	lincRNA		9	-1	49055465	389
ENSMUSG00000103742	TEC	Gm38240	ENSMUST00000195110	TEC		1	1	129283107	2487
ENSMUSG00000052392	protein_coding	Acot4	ENSMUST00000128162	protein_coding		12	1	84038707	647
ENSMUSG00000086653	lincRNA	9130015L21Rik	ENSMUST00000140319	lincRNA		2	1	160016653	606
ENSMUSG00000089648	processed_pseudogene	Gm15790	ENSMUST00000161109	processed_pseudogene		1	-1	129797858	1251
ENSMUSG00000110989	processed_pseudogene	Gm7444	ENSMUST00000217455	processed_pseudogene		9	1	56027742	2428
ENSMUSG00000022194	protein_coding	Pabpn1	ENSMUST00000150975	protein_coding	alternative2	14	1	54894155	1775
ENSMUSG00000052392	protein_coding	Acot4	ENSMUST00000221860	processed_transcript		12	1	84042549	365
ENSMUSG00000102800	TEC	Gm37479	ENSMUST00000194169	TEC		1	1	129833148	3841
ENSMUSG00000082728	processed_pseudogene	Supt20-ps	ENSMUST00000117999	processed_pseudogene		X	-1	93921962	1560
ENSMUSG00000103803	TEC	Gm37064	ENSMUST00000193851	TEC		1	1	129860815	2231
ENSMUSG00000026125	protein_coding	Prss39	ENSMUST00000027299	protein_coding	principal1	1	1	34498410	1267
ENSMUSG00000081573	processed_pseudogene	Gm15164	ENSMUST00000122203	processed_pseudogene		X	1	93931561	271
ENSMUSG00000103637	TEC	Gm38330	ENSMUST00000192743	TEC		1	1	129372304	959
ENSMUSG00000021756	protein_coding	Il6st	ENSMUST00000183663	protein_coding	principal2	13	1	112464070	8678
ENSMUSG00000022194	protein_coding	Pabpn1	ENSMUST00000172695	nonsense_mediated_decay		14	1	54894156	826
ENSMUSG00000026125	protein_coding	Prss39	ENSMUST00000191604	nonsense_mediated_decay		1	1	34498421	554
ENSMUSG00000021756	protein_coding	Il6st	ENSMUST00000184311	protein_coding	principal2	13	1	112464081	2985
ENSMUSG00000042581	protein_coding	Thsd7b	ENSMUST00000148051	retained_intron		1	1	129273302	561
ENSMUSG00000074623	protein_coding	Gm826	ENSMUST00000109475	protein_coding	alternative2	2	-1	160313616	803
ENSMUSG00000022194	protein_coding	Pabpn1	ENSMUST00000141446	protein_coding	alternative2	14	1	54894573	912
ENSMUSG00000081319	processed_pseudogene	Gm12936	ENSMUST00000121439	processed_pseudogene		4	-1	126584809	301
ENSMUSG00000021756	protein_coding	Il6st	ENSMUST00000183886	protein_coding		13	1	112464112	3004
ENSMUSG00000074623	protein_coding	Gm826	ENSMUST00000138905	processed_transcript		2	-1	160334162	615
ENSMUSG00000022194	protein_coding	Pabpn1	ENSMUST00000139985	protein_coding	alternative2	14	1	54894602	903
ENSMUSG00000021756	protein_coding	Il6st	ENSMUST00000184276	nonsense_mediated_decay		13	1	112464241	3009
ENSMUSG00000021228	protein_coding	Acot3	ENSMUST00000120927	protein_coding	alternative2	12	1	84052144	1854
ENSMUSG00000074623	protein_coding	Gm826	ENSMUST00000099127	protein_coding	principal2	2	-1	160327494	637
ENSMUSG00000051295	lincRNA	9630028B13Rik	ENSMUST00000143787	lincRNA		1	-1	185441819	3408
ENSMUSG00000022194	protein_coding	Pabpn1	ENSMUST00000172557	protein_coding	alternative2	14	1	54894618	700
ENSMUSG00000036863	protein_coding	Syde2	ENSMUST00000212479	protein_coding	alternative2	3	1	145988137	3810
ENSMUSG00000013033	protein_coding	Adgrl1	ENSMUST00000141158	protein_coding	principal2	8	1	83900105	8181
ENSMUSG00000021756	protein_coding	Il6st	ENSMUST00000183868	protein_coding		13	1	112467593	322
ENSMUSG00000118510	processed_pseudogene	AC131980.1	ENSMUST00000238834	processed_pseudogene		1	1	185432013	408
ENSMUSG00000022194	protein_coding	Pabpn1	ENSMUST00000146271	retained_intron		14	1	54894833	938
ENSMUSG00000036863	protein_coding	Syde2	ENSMUST00000200546	protein_coding	alternative2	3	1	145988653	4712
ENSMUSG00000021756	protein_coding	Il6st	ENSMUST00000184445	protein_coding		13	1	112472599	1870
ENSMUSG00000021228	protein_coding	Acot3	ENSMUST00000021653	protein_coding	principal3	12	1	84052151	3431
ENSMUSG00000036863	protein_coding	Syde2	ENSMUST00000195918	processed_transcript		3	1	145993671	427
ENSMUSG00000021228	protein_coding	Acot3	ENSMUST00000223080	protein_coding		12	1	84053096	1545
ENSMUSG00000036863	protein_coding	Syde2	ENSMUST00000039517	protein_coding	principal2	3	1	145987870	5495
ENSMUSG00000021756	protein_coding	Il6st	ENSMUST00000183829	protein_coding		13	1	112475046	612
ENSMUSG00000021756	protein_coding	Il6st	ENSMUST00000183513	protein_coding		13	1	112475046	201
ENSMUSG00000104853	unprocessed_pseudogene	Olfr375-ps1	ENSMUST00000198131	unprocessed_pseudogene		3	-1	131899328	249
ENSMUSG00000013033	protein_coding	Adgrl1	ENSMUST00000124355	nonsense_mediated_decay		8	1	83900573	5935
ENSMUSG00000021756	protein_coding	Il6st	ENSMUST00000184949	protein_coding	alternative2	13	1	112475046	2571
ENSMUSG00000105331	lincRNA	Gm29865	ENSMUST00000197726	lincRNA		3	1	131759805	451
ENSMUSG00000013033	protein_coding	Adgrl1	ENSMUST00000045393	protein_coding	alternative1	8	1	83900715	5643
ENSMUSG00000021756	protein_coding	Il6st	ENSMUST00000070731	protein_coding	principal2	13	1	112475008	5207
ENSMUSG00000013033	protein_coding	Adgrl1	ENSMUST00000132500	protein_coding		8	1	83900735	5719
ENSMUSG00000021703	protein_coding	Serinc5	ENSMUST00000049488	protein_coding	principal1	13	1	92611091	5366
ENSMUSG00000050876	protein_coding	Spata31d1a	ENSMUST00000224982	protein_coding	principal1	13	-1	59710330	5325
ENSMUSG00000013033	protein_coding	Adgrl1	ENSMUST00000152978	protein_coding		8	1	83900735	5734
ENSMUSG00000004771	protein_coding	Rab11a	ENSMUST00000172298	protein_coding	principal1	9	-1	64737758	2336
ENSMUSG00000086995	antisense	Gm13544	ENSMUST00000131189	antisense		2	1	58276779	2940
ENSMUSG00000021703	protein_coding	Serinc5	ENSMUST00000224250	retained_intron		13	1	92611174	1596
ENSMUSG00000021703	protein_coding	Serinc5	ENSMUST00000224458	retained_intron		13	1	92705782	804
ENSMUSG00000050876	protein_coding	Spata31d1a	ENSMUST00000066510	protein_coding	principal1	13	-1	59706181	4261
ENSMUSG00000082408	processed_pseudogene	Gm13545	ENSMUST00000119044	processed_pseudogene		2	1	58338347	482
ENSMUSG00000004771	protein_coding	Rab11a	ENSMUST00000167569	protein_coding		9	-1	64737742	726
ENSMUSG00000013033	protein_coding	Adgrl1	ENSMUST00000139575	processed_transcript		8	1	83923092	756
ENSMUSG00000112977	lincRNA	Gm34081	ENSMUST00000221332	lincRNA		12	-1	109516740	690
ENSMUSG00000013033	protein_coding	Adgrl1	ENSMUST00000131717	protein_coding		8	1	83924151	5152
ENSMUSG00000004771	protein_coding	Rab11a	ENSMUST00000172444	retained_intron		9	-1	64725720	603
ENSMUSG00000050876	protein_coding	Spata31d1a	ENSMUST00000224469	protein_coding		13	-1	59706197	1616
ENSMUSG00000004771	protein_coding	Rab11a	ENSMUST00000168366	protein_coding		9	-1	64726710	500
ENSMUSG00000050876	protein_coding	Spata31d1a	ENSMUST00000225362	retained_intron		13	-1	59706181	556
ENSMUSG00000013033	protein_coding	Adgrl1	ENSMUST00000150674	retained_intron		8	1	83934577	909
ENSMUSG00000004771	protein_coding	Rab11a	ENSMUST00000166857	processed_transcript		9	-1	64726453	397
ENSMUSG00000033099	protein_coding	Nol12	ENSMUST00000138880	protein_coding	principal1	15	1	78934933	3721
ENSMUSG00000113704	TEC	Gm27528	ENSMUST00000222916	TEC		12	1	109530892	2012
ENSMUSG00000013033	protein_coding	Adgrl1	ENSMUST00000141661	retained_intron		8	1	83936155	440
ENSMUSG00000004771	protein_coding	Rab11a	ENSMUST00000171100	protein_coding		9	-1	64737730	508
ENSMUSG00000033099	protein_coding	Nol12	ENSMUST00000041164	protein_coding		15	1	78934995	742
ENSMUSG00000013033	protein_coding	Adgrl1	ENSMUST00000131018	protein_coding		8	1	83937655	639
ENSMUSG00000098248	antisense	Gm27222	ENSMUST00000183398	antisense		14	1	69259146	427
ENSMUSG00000004771	protein_coding	Rab11a	ENSMUST00000169058	protein_coding		9	-1	64737623	462
ENSMUSG00000004771	protein_coding	Rab11a	ENSMUST00000004892	protein_coding		9	-1	64737752	595
ENSMUSG00000033099	protein_coding	Nol12	ENSMUST00000145157	protein_coding		15	1	78935186	681
ENSMUSG00000004771	protein_coding	Rab11a	ENSMUST00000165083	processed_transcript		9	-1	64736511	695
ENSMUSG00000082536	processed_pseudogene	Gm13456	ENSMUST00000118928	processed_pseudogene		2	1	40555752	1365
ENSMUSG00000033099	protein_coding	Nol12	ENSMUST00000123013	protein_coding		15	1	78935208	681
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000041783	protein_coding	principal3	5	-1	140702378	6037
ENSMUSG00000034248	protein_coding	Slc25a37	ENSMUST00000037064	protein_coding	principal1	14	-1	69285112	4174
ENSMUSG00000074622	protein_coding	Mafb	ENSMUST00000099126	protein_coding	principal1	2	-1	160367065	3363
ENSMUSG00000079356	transcribed_unprocessed_pseudogene	Mettl4-ps1	ENSMUST00000130218	processed_transcript		17	1	71526896	1323
ENSMUSG00000106407	processed_transcript	Gm43439	ENSMUST00000138710	processed_transcript		3	1	37312519	322
ENSMUSG00000022142	protein_coding	Nup155	ENSMUST00000163765	protein_coding	principal1	15	1	8109273	7832
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000147839	retained_intron		5	-1	140666241	2223
ENSMUSG00000079356	transcribed_unprocessed_pseudogene	Mettl4-ps1	ENSMUST00000127676	transcribed_unprocessed_pseudogene		17	1	71529066	1260
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000121326	protein_coding	principal4	3	-1	158036639	3106
ENSMUSG00000034248	protein_coding	Slc25a37	ENSMUST00000184497	retained_intron		14	-1	69285112	5927
ENSMUSG00000083353	processed_pseudogene	Gm12540	ENSMUST00000121938	processed_pseudogene		3	1	37327072	319
ENSMUSG00000022142	protein_coding	Nup155	ENSMUST00000230017	protein_coding		15	1	8109336	4391
ENSMUSG00000004667	protein_coding	Polr2e	ENSMUST00000147507	retained_intron		10	-1	80037185	792
ENSMUSG00000034248	protein_coding	Slc25a37	ENSMUST00000184914	nonsense_mediated_decay		14	-1	69284967	2212
ENSMUSG00000022142	protein_coding	Nup155	ENSMUST00000229466	retained_intron		15	1	8130098	594
ENSMUSG00000004667	protein_coding	Polr2e	ENSMUST00000143438	retained_intron		10	-1	80039710	2403
ENSMUSG00000034248	protein_coding	Slc25a37	ENSMUST00000183882	protein_coding		14	-1	69284982	342
ENSMUSG00000085492	antisense	Trmt61b	ENSMUST00000130952	antisense		17	-1	71598755	2516
ENSMUSG00000049972	protein_coding	Skint9	ENSMUST00000058605	protein_coding	principal1	4	-1	112433985	1372
ENSMUSG00000022142	protein_coding	Nup155	ENSMUST00000230337	processed_transcript		15	1	8143046	762
ENSMUSG00000098255	antisense	Gm27223	ENSMUST00000184653	antisense		14	1	69284606	606
ENSMUSG00000096834	protein_coding	Gm15127	ENSMUST00000101186	protein_coding	principal2	X	1	148663598	2026
ENSMUSG00000085492	antisense	Trmt61b	ENSMUST00000137830	antisense		17	-1	71598746	2572
ENSMUSG00000022142	protein_coding	Nup155	ENSMUST00000229039	retained_intron		15	1	8143124	558
ENSMUSG00000096834	protein_coding	Gm15127	ENSMUST00000112753	protein_coding	alternative2	X	1	148671291	1950
ENSMUSG00000085492	antisense	Trmt61b	ENSMUST00000143828	antisense		17	-1	71598253	781
ENSMUSG00000022142	protein_coding	Nup155	ENSMUST00000230925	retained_intron		15	1	8151083	2419
ENSMUSG00000096834	protein_coding	Gm15127	ENSMUST00000101190	protein_coding	alternative2	X	1	148663604	1972
ENSMUSG00000022142	protein_coding	Nup155	ENSMUST00000230647	retained_intron		15	1	8153342	2730
ENSMUSG00000037225	protein_coding	Fgf2	ENSMUST00000138563	protein_coding	principal2	3	1	37348346	1240
ENSMUSG00000047977	protein_coding	Synb	ENSMUST00000059362	protein_coding	principal1	14	-1	69294299	4055
ENSMUSG00000113369	processed_pseudogene	Gm8504	ENSMUST00000220511	processed_pseudogene		12	1	86650573	1090
ENSMUSG00000042581	protein_coding	Thsd7b	ENSMUST00000073527	protein_coding	principal1	1	1	129273344	6213
ENSMUSG00000103065	TEC	Gm20236	ENSMUST00000193037	TEC		14	-1	69282140	4540
ENSMUSG00000042581	protein_coding	Thsd7b	ENSMUST00000040311	protein_coding		1	1	129273463	3895
ENSMUSG00000081166	unprocessed_pseudogene	Gm12819	ENSMUST00000122223	unprocessed_pseudogene		4	1	112512740	629
ENSMUSG00000042581	protein_coding	Thsd7b	ENSMUST00000140629	processed_transcript		1	1	129273485	674
ENSMUSG00000104405	TEC	Gm31748	ENSMUST00000194938	TEC		14	1	69284350	1497
ENSMUSG00000037225	protein_coding	Fgf2	ENSMUST00000200585	protein_coding	principal2	3	1	37348653	5973
ENSMUSG00000042581	protein_coding	Thsd7b	ENSMUST00000152305	protein_coding		1	1	129537511	1484
ENSMUSG00000107870	TEC	Gm43940	ENSMUST00000204549	TEC		6	1	139830387	165
ENSMUSG00000037225	protein_coding	Fgf2	ENSMUST00000038885	protein_coding	alternative2	3	1	37348850	462
ENSMUSG00000083599	processed_pseudogene	Gm12821	ENSMUST00000120022	processed_pseudogene		4	1	112537061	600
ENSMUSG00000042581	protein_coding	Thsd7b	ENSMUST00000190870	retained_intron		1	1	129613275	2769
ENSMUSG00000105146	lincRNA	Gm35409	ENSMUST00000196412	lincRNA		3	1	146038445	1102
ENSMUSG00000037225	protein_coding	Fgf2	ENSMUST00000150021	processed_transcript		3	1	37366990	380
ENSMUSG00000037225	protein_coding	Fgf2	ENSMUST00000145228	processed_transcript		3	1	37380659	485
ENSMUSG00000049057	protein_coding	Olfr1257	ENSMUST00000111519	protein_coding	principal1	2	1	89878437	2756
ENSMUSG00000004667	protein_coding	Polr2e	ENSMUST00000004786	protein_coding	principal1	10	-1	80039795	1148
ENSMUSG00000037225	protein_coding	Fgf2	ENSMUST00000108120	protein_coding		3	1	37380755	526
ENSMUSG00000049057	protein_coding	Olfr1257	ENSMUST00000060795	protein_coding	principal1	2	1	89880794	1016
ENSMUSG00000042581	protein_coding	Thsd7b	ENSMUST00000151700	processed_transcript		1	1	129915539	3322
ENSMUSG00000037225	protein_coding	Fgf2	ENSMUST00000091203	protein_coding		3	1	37380755	535
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000188066	protein_coding		6	1	139587221	721
ENSMUSG00000042581	protein_coding	Thsd7b	ENSMUST00000140834	processed_transcript		1	1	130163831	2436
ENSMUSG00000037225	protein_coding	Fgf2	ENSMUST00000199938	retained_intron		3	1	37404541	257
ENSMUSG00000042581	protein_coding	Thsd7b	ENSMUST00000143130	processed_transcript		1	1	130163846	535
ENSMUSG00000104130	TEC	Gm36951	ENSMUST00000193840	TEC		1	1	129710543	2687
ENSMUSG00000084971	lincRNA	4930579D09Rik	ENSMUST00000132321	lincRNA		6	-1	143535508	469
ENSMUSG00000004667	protein_coding	Polr2e	ENSMUST00000131743	retained_intron		10	-1	80039650	1238
ENSMUSG00000004667	protein_coding	Polr2e	ENSMUST00000152843	retained_intron		10	-1	80039701	900
ENSMUSG00000086887	lincRNA	1700060C16Rik	ENSMUST00000150559	lincRNA		6	-1	143651288	645
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000136385	retained_intron		5	-1	140702265	6924
ENSMUSG00000109756	processed_pseudogene	Gm5339	ENSMUST00000210551	processed_pseudogene		7	-1	102569735	1102
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000077890	protein_coding	alternative2	5	-1	140702339	2494
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000129704	protein_coding	alternative2	5	-1	140683495	1188
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000190962	protein_coding		6	1	139587237	1774
ENSMUSG00000049149	protein_coding	Olfr1258	ENSMUST00000213720	protein_coding	principal1	2	1	89927309	7098
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000148788	retained_intron		5	-1	140669359	389
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000124005	retained_intron		5	-1	140689978	707
ENSMUSG00000049149	protein_coding	Olfr1258	ENSMUST00000102609	protein_coding	principal1	2	1	89927319	7007
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000187618	protein_coding		6	1	139599480	2023
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000149674	retained_intron		5	-1	140702276	2983
ENSMUSG00000049149	protein_coding	Olfr1258	ENSMUST00000111516	protein_coding	principal1	2	1	89929811	936
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000123683	processed_transcript		5	-1	140701969	417
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000186585	processed_transcript		6	1	139599483	1358
ENSMUSG00000087479	processed_transcript	Gm16835	ENSMUST00000140488	processed_transcript		14	1	119098965	2809
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000142081	protein_coding		5	-1	140702378	716
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000185968	protein_coding		6	1	139614071	1627
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000135028	protein_coding		5	-1	140702300	386
ENSMUSG00000041263	protein_coding	Rusc1	ENSMUST00000166687	protein_coding	alternative2	3	-1	89090045	1922
ENSMUSG00000036555	protein_coding	Iqce	ENSMUST00000139382	retained_intron		5	-1	140702294	472
ENSMUSG00000073975	protein_coding	Olfr550	ENSMUST00000216524	protein_coding	principal1	7	1	102571442	4957
ENSMUSG00000073975	protein_coding	Olfr550	ENSMUST00000098225	protein_coding	principal1	7	1	102578469	1038
ENSMUSG00000104477	processed_pseudogene	Gm18717	ENSMUST00000192744	processed_pseudogene		3	-1	67743297	1241
ENSMUSG00000117174	processed_pseudogene	Gm49939	ENSMUST00000233342	processed_pseudogene		17	1	66778881	253
ENSMUSG00000117065	processed_pseudogene	Gm49941	ENSMUST00000232933	processed_pseudogene		17	-1	66682194	457
ENSMUSG00000117224	processed_pseudogene	Gm49940	ENSMUST00000233778	processed_pseudogene		17	1	66862240	387
ENSMUSG00000114291	antisense	Gm47471	ENSMUST00000223962	antisense		17	1	66738754	1300
ENSMUSG00000073974	protein_coding	Olfr551	ENSMUST00000213540	protein_coding	principal1	7	-1	102591886	5440
ENSMUSG00000114563	antisense	1700016K05Rik	ENSMUST00000224424	antisense		17	1	66714454	386
ENSMUSG00000073974	protein_coding	Olfr551	ENSMUST00000098224	protein_coding	principal1	7	-1	102588819	1079
ENSMUSG00000117166	processed_pseudogene	Gm18961	ENSMUST00000233017	processed_pseudogene		17	1	66823120	661
ENSMUSG00000117332	TEC	Gm49942	ENSMUST00000233228	TEC		17	-1	66930199	3375
ENSMUSG00000114492	antisense	Gm9984	ENSMUST00000225696	antisense		17	1	67010485	3118
ENSMUSG00000117329	processed_pseudogene	Gm49943	ENSMUST00000233720	processed_pseudogene		17	-1	66824628	139
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000148022	retained_intron		14	-1	119007465	2716
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000187069	processed_transcript		6	1	139715861	1726
ENSMUSG00000027111	protein_coding	Itga6	ENSMUST00000133124	processed_transcript		2	1	71745616	707
ENSMUSG00000027111	protein_coding	Itga6	ENSMUST00000152009	processed_transcript		2	1	71786929	1542
ENSMUSG00000052525	protein_coding	Spdya	ENSMUST00000124001	protein_coding		17	1	71552061	1247
ENSMUSG00000091423	antisense	Gm17509	ENSMUST00000238456	antisense		13	-1	117221072	2370
ENSMUSG00000091423	antisense	Gm17509	ENSMUST00000165680	antisense		13	-1	117221075	2375
ENSMUSG00000052525	protein_coding	Spdya	ENSMUST00000064420	protein_coding		17	1	71552072	1877
ENSMUSG00000052525	protein_coding	Spdya	ENSMUST00000144142	protein_coding	principal1	17	1	71556258	933
ENSMUSG00000041263	protein_coding	Rusc1	ENSMUST00000090929	protein_coding	principal4	3	-1	89093290	3706
ENSMUSG00000052525	protein_coding	Spdya	ENSMUST00000167641	protein_coding	principal1	17	1	71552061	1891
ENSMUSG00000025468	protein_coding	Caly	ENSMUST00000026541	protein_coding	principal1	7	-1	140082508	1220
ENSMUSG00000041263	protein_coding	Rusc1	ENSMUST00000052539	protein_coding	alternative2	3	-1	89093311	3316
ENSMUSG00000041263	protein_coding	Rusc1	ENSMUST00000200357	retained_intron		3	-1	89089741	2621
ENSMUSG00000041263	protein_coding	Rusc1	ENSMUST00000196223	protein_coding		3	-1	89089975	760
ENSMUSG00000021728	protein_coding	Emb	ENSMUST00000225981	protein_coding		13	1	117208536	454
ENSMUSG00000100436	processed_pseudogene	Gm29657	ENSMUST00000189807	processed_pseudogene		1	1	119793520	342
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000156203	protein_coding	principal1	14	-1	119099430	6456
ENSMUSG00000041263	protein_coding	Rusc1	ENSMUST00000198506	retained_intron		3	-1	89089755	523
ENSMUSG00000090277	processed_pseudogene	Gm8338	ENSMUST00000163928	processed_pseudogene		1	1	119817763	363
ENSMUSG00000041263	protein_coding	Rusc1	ENSMUST00000196043	protein_coding		3	-1	89089975	344
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000123350	retained_intron		14	-1	119007225	4346
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000131424	processed_transcript		14	-1	119006717	1170
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000126023	retained_intron		14	-1	119007399	598
ENSMUSG00000025468	protein_coding	Caly	ENSMUST00000211044	protein_coding	principal1	7	-1	140082227	1029
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000138720	processed_transcript		14	-1	119009061	591
ENSMUSG00000025468	protein_coding	Caly	ENSMUST00000211283	protein_coding	principal1	7	-1	140082548	975
ENSMUSG00000105204	protein_coding	Gm43738	ENSMUST00000200659	protein_coding	principal1	3	-1	89101099	2635
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000148648	retained_intron		14	-1	119008169	613
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000154130	processed_transcript		14	-1	119007556	693
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000173391	protein_coding		14	-1	119018877	648
ENSMUSG00000025468	protein_coding	Caly	ENSMUST00000166758	protein_coding	principal1	7	-1	140082268	1220
ENSMUSG00000087450	lincRNA	Gm13994	ENSMUST00000137397	lincRNA		2	1	124708655	513
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000153693	nonsense_mediated_decay		14	-1	119032233	668
ENSMUSG00000025468	protein_coding	Caly	ENSMUST00000211681	retained_intron		7	-1	140082512	1192
ENSMUSG00000024135	protein_coding	Srbd1	ENSMUST00000234761	protein_coding		17	-1	86040431	1474
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000127153	nonsense_mediated_decay		14	-1	119058280	2284
ENSMUSG00000043940	protein_coding	Wdfy3	ENSMUST00000053177	protein_coding	principal2	5	-1	102069921	14274
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000173470	retained_intron		14	-1	119036039	593
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000138923	retained_intron		14	-1	119049752	715
ENSMUSG00000042104	protein_coding	Uggt2	ENSMUST00000136924	retained_intron		14	-1	119099430	3394
ENSMUSG00000043940	protein_coding	Wdfy3	ENSMUST00000173955	retained_intron		5	-1	101851513	2713
ENSMUSG00000027722	protein_coding	Spata5	ENSMUST00000108112	protein_coding	alternative2	3	1	37419896	3295
ENSMUSG00000072624	protein_coding	Gm5460	ENSMUST00000227383	protein_coding		14	1	34016758	3757
ENSMUSG00000043940	protein_coding	Wdfy3	ENSMUST00000174598	protein_coding	alternative1	5	-1	101981558	10581
ENSMUSG00000072624	protein_coding	Gm5460	ENSMUST00000226499	protein_coding	alternative2	14	1	34017062	493
ENSMUSG00000043940	protein_coding	Wdfy3	ENSMUST00000212024	protein_coding		5	-1	101981558	10539
ENSMUSG00000027722	protein_coding	Spata5	ENSMUST00000029277	protein_coding	principal3	3	1	37420298	2890
ENSMUSG00000043940	protein_coding	Wdfy3	ENSMUST00000172927	nonsense_mediated_decay		5	-1	101930853	641
ENSMUSG00000024135	protein_coding	Srbd1	ENSMUST00000095187	protein_coding	principal1	17	-1	86145175	3530
ENSMUSG00000072624	protein_coding	Gm5460	ENSMUST00000227522	retained_intron		14	1	34041038	1943
ENSMUSG00000027722	protein_coding	Spata5	ENSMUST00000198968	protein_coding	alternative2	3	1	37420312	2916
ENSMUSG00000043940	protein_coding	Wdfy3	ENSMUST00000174698	protein_coding		5	-1	102069921	3858
ENSMUSG00000024135	protein_coding	Srbd1	ENSMUST00000234951	protein_coding		17	-1	86040364	795
ENSMUSG00000027722	protein_coding	Spata5	ENSMUST00000147687	processed_transcript		3	1	37420373	404
ENSMUSG00000043940	protein_coding	Wdfy3	ENSMUST00000172512	processed_transcript		5	-1	101937676	704
ENSMUSG00000027722	protein_coding	Spata5	ENSMUST00000138225	processed_transcript		3	1	37420864	370
ENSMUSG00000024135	protein_coding	Srbd1	ENSMUST00000234682	protein_coding		17	-1	86040364	1232
ENSMUSG00000027722	protein_coding	Spata5	ENSMUST00000124347	processed_transcript		3	1	37432058	599
ENSMUSG00000106451	TEC	Gm42934	ENSMUST00000196920	TEC		5	1	101956607	1345
ENSMUSG00000024135	protein_coding	Srbd1	ENSMUST00000234645	processed_transcript		17	-1	86057700	653
ENSMUSG00000027722	protein_coding	Spata5	ENSMUST00000142199	retained_intron		3	1	37436567	371
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000111868	protein_coding		6	1	139715861	4407
ENSMUSG00000072624	protein_coding	Gm5460	ENSMUST00000100719	protein_coding	principal2	14	1	34041078	1903
ENSMUSG00000024135	protein_coding	Srbd1	ENSMUST00000234595	processed_transcript		17	-1	86120271	809
ENSMUSG00000027722	protein_coding	Spata5	ENSMUST00000130674	retained_intron		3	1	37451721	592
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000191013	retained_intron		6	1	139772442	2690
ENSMUSG00000021728	protein_coding	Emb	ENSMUST00000022242	protein_coding	principal1	13	1	117220272	2923
ENSMUSG00000027722	protein_coding	Spata5	ENSMUST00000200093	processed_transcript		3	1	37493188	482
ENSMUSG00000027722	protein_coding	Spata5	ENSMUST00000132958	processed_transcript		3	1	37573618	379
ENSMUSG00000021728	protein_coding	Emb	ENSMUST00000225648	retained_intron		13	1	117220716	1754
ENSMUSG00000105063	TEC	Gm43488	ENSMUST00000198874	TEC		3	1	37339017	2504
ENSMUSG00000021728	protein_coding	Emb	ENSMUST00000224821	processed_transcript		13	1	117220738	996
ENSMUSG00000021728	protein_coding	Emb	ENSMUST00000225460	processed_transcript		13	1	117220744	753
ENSMUSG00000021728	protein_coding	Emb	ENSMUST00000224455	retained_intron		13	1	117228026	2136
ENSMUSG00000092354	antisense	Gm20548	ENSMUST00000173528	antisense		5	1	101837416	461
ENSMUSG00000080723	processed_pseudogene	Gm12564	ENSMUST00000119860	processed_pseudogene		3	-1	37556503	321
ENSMUSG00000092354	antisense	Gm20548	ENSMUST00000173965	antisense		5	1	101837442	707
ENSMUSG00000092354	antisense	Gm20548	ENSMUST00000174864	antisense		5	1	101837452	787
ENSMUSG00000106166	TEC	Gm43484	ENSMUST00000198333	TEC		3	1	37488827	5966
ENSMUSG00000092354	antisense	Gm20548	ENSMUST00000174528	antisense		5	1	101837458	791
ENSMUSG00000092354	antisense	Gm20548	ENSMUST00000174312	antisense		5	1	101840155	619
ENSMUSG00000105761	TEC	Gm43787	ENSMUST00000197792	TEC		5	-1	102058069	1037
ENSMUSG00000051444	protein_coding	Bbs12	ENSMUST00000057975	protein_coding	principal1	3	1	37312554	2433
ENSMUSG00000068806	protein_coding	Olfr1259	ENSMUST00000214846	protein_coding	principal1	2	-1	89948664	4325
ENSMUSG00000032320	protein_coding	Rcn2	ENSMUST00000147842	nonsense_mediated_decay		9	1	56041845	3080
ENSMUSG00000068806	protein_coding	Olfr1259	ENSMUST00000090695	protein_coding	principal1	2	-1	89944113	930
ENSMUSG00000051444	protein_coding	Bbs12	ENSMUST00000108121	protein_coding		3	1	37312556	2348
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000208214	nonsense_mediated_decay		9	1	108508059	2398
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000189374	processed_transcript		6	1	139841445	3549
ENSMUSG00000109228	protein_coding	Fam81b	ENSMUST00000208418	protein_coding	principal1	13	-1	76305072	2760
ENSMUSG00000073973	protein_coding	Olfr552	ENSMUST00000215712	protein_coding	principal1	7	1	102597770	4206
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000134939	protein_coding		9	1	108508060	2374
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000187223	processed_transcript		6	1	139841503	3096
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000187448	processed_transcript		6	1	139841581	2059
ENSMUSG00000073973	protein_coding	Olfr552	ENSMUST00000098223	protein_coding	principal1	7	1	102604356	954
ENSMUSG00000109228	protein_coding	Fam81b	ENSMUST00000208586	processed_transcript		13	-1	76249852	513
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000207947	nonsense_mediated_decay		9	1	108508065	1087
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000191591	processed_transcript		6	1	139917983	253
ENSMUSG00000032320	protein_coding	Rcn2	ENSMUST00000114276	protein_coding	principal1	9	1	56041857	2024
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000120737	protein_coding	alternative1	17	1	47368887	1017
ENSMUSG00000114242	antisense	Gm31219	ENSMUST00000224604	antisense		13	1	76255947	2162
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000207126	retained_intron		9	1	108508071	3066
ENSMUSG00000035898	protein_coding	Uba6	ENSMUST00000039373	protein_coding	principal2	5	-1	86172803	6590
ENSMUSG00000114242	antisense	Gm31219	ENSMUST00000225095	antisense		13	1	76255966	523
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000218528	protein_coding		6	1	139736895	2712
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000207713	protein_coding		9	1	108508093	738
ENSMUSG00000032320	protein_coding	Rcn2	ENSMUST00000151585	retained_intron		9	1	56041870	1987
ENSMUSG00000070719	protein_coding	Pla2g4d	ENSMUST00000094665	protein_coding	principal1	2	-1	120289197	3688
ENSMUSG00000073972	protein_coding	Olfr553	ENSMUST00000216776	protein_coding	principal1	7	-1	102618218	3972
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000032353	protein_coding		6	1	139621888	1206
ENSMUSG00000032320	protein_coding	Rcn2	ENSMUST00000144869	retained_intron		9	1	56041885	655
ENSMUSG00000035898	protein_coding	Uba6	ENSMUST00000113373	protein_coding	alternative2	5	-1	86172511	3504
ENSMUSG00000110708	processed_pseudogene	Gnb1-ps3	ENSMUST00000212191	processed_pseudogene		8	1	94760288	950
ENSMUSG00000030228	protein_coding	Pik3c2g	ENSMUST00000087657	protein_coding	principal1	6	1	139843648	3303
ENSMUSG00000073972	protein_coding	Olfr553	ENSMUST00000098222	protein_coding	principal1	7	-1	102614987	981
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000137980	retained_intron		9	1	108508448	1022
ENSMUSG00000103951	TEC	Gm37269	ENSMUST00000193906	TEC		6	1	139776430	1891
ENSMUSG00000021993	protein_coding	Mipep	ENSMUST00000063562	protein_coding	principal1	14	1	60784573	3015
ENSMUSG00000035898	protein_coding	Uba6	ENSMUST00000147734	retained_intron		5	-1	86172739	4177
ENSMUSG00000073971	protein_coding	Olfr554	ENSMUST00000215995	protein_coding	principal1	7	1	102638432	2515
ENSMUSG00000073971	protein_coding	Olfr554	ENSMUST00000214841	protein_coding	principal1	7	1	102638432	2659
ENSMUSG00000021993	protein_coding	Mipep	ENSMUST00000225506	nonsense_mediated_decay		14	1	60784582	3172
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000119945	protein_coding	principal4	17	1	47368891	1018
ENSMUSG00000073971	protein_coding	Olfr554	ENSMUST00000098221	protein_coding	principal1	7	1	102640248	954
ENSMUSG00000021993	protein_coding	Mipep	ENSMUST00000224635	nonsense_mediated_decay		14	1	60784585	3442
ENSMUSG00000050174	protein_coding	Nudt6	ENSMUST00000108118	protein_coding		3	-1	37419580	935
ENSMUSG00000044923	protein_coding	Olfr1030	ENSMUST00000056849	protein_coding	principal1	2	1	85979276	4522
ENSMUSG00000021993	protein_coding	Mipep	ENSMUST00000225043	protein_coding		14	1	60784625	1548
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000152274	retained_intron		3	-1	158023422	2952
ENSMUSG00000050174	protein_coding	Nudt6	ENSMUST00000108117	protein_coding		3	-1	37419580	879
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000127593	retained_intron		6	1	117841180	1355
ENSMUSG00000021993	protein_coding	Mipep	ENSMUST00000223709	retained_intron		14	1	60784638	2821
ENSMUSG00000079407	lincRNA	1700110I01Rik	ENSMUST00000168543	lincRNA		14	1	3262340	716
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000112859	protein_coding		6	1	117841180	421
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000072875	protein_coding	alternative2	3	-1	158031766	2654
ENSMUSG00000043267	protein_coding	Olfr1031	ENSMUST00000216807	protein_coding	principal1	2	1	85990304	1946
ENSMUSG00000084951	antisense	Mipepos	ENSMUST00000155855	antisense		14	-1	60784581	610
ENSMUSG00000079407	lincRNA	1700110I01Rik	ENSMUST00000112812	lincRNA		14	1	3262368	1737
ENSMUSG00000018040	protein_coding	Rrp7a	ENSMUST00000018184	protein_coding	principal1	15	-1	83122801	4363
ENSMUSG00000043267	protein_coding	Olfr1031	ENSMUST00000050942	protein_coding	principal1	2	1	85991819	1011
ENSMUSG00000079407	lincRNA	1700110I01Rik	ENSMUST00000188883	lincRNA		14	1	3262461	337
ENSMUSG00000079407	lincRNA	1700110I01Rik	ENSMUST00000186836	lincRNA		14	1	3270860	350
ENSMUSG00000079407	lincRNA	1700110I01Rik	ENSMUST00000112775	lincRNA		14	1	3298551	1671
ENSMUSG00000018040	protein_coding	Rrp7a	ENSMUST00000166766	nonsense_mediated_decay		15	-1	83117616	486
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000135418	retained_intron		17	1	47368892	4090
ENSMUSG00000079407	lincRNA	1700110I01Rik	ENSMUST00000179153	lincRNA		14	1	3270681	384
ENSMUSG00000018040	protein_coding	Rrp7a	ENSMUST00000167589	retained_intron		15	-1	83118346	792
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000125963	protein_coding		17	1	47368893	531
ENSMUSG00000018040	protein_coding	Rrp7a	ENSMUST00000166019	protein_coding		15	-1	83122149	492
ENSMUSG00000071347	protein_coding	C1qtnf9	ENSMUST00000025940	protein_coding	principal1	14	1	60768134	1903
ENSMUSG00000110251	processed_pseudogene	Gm2996	ENSMUST00000211398	processed_pseudogene		7	-1	102648166	537
ENSMUSG00000083753	unprocessed_pseudogene	Gm12814	ENSMUST00000117091	unprocessed_pseudogene		4	1	112566407	846
ENSMUSG00000018040	protein_coding	Rrp7a	ENSMUST00000167483	nonsense_mediated_decay		15	-1	83122751	759
ENSMUSG00000050174	protein_coding	Nudt6	ENSMUST00000052645	protein_coding	alternative2	3	-1	37419596	1155
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000137224	protein_coding		6	1	117841181	765
ENSMUSG00000090964	antisense	Gm17206	ENSMUST00000168123	antisense		15	-1	83105929	577
ENSMUSG00000050174	protein_coding	Nudt6	ENSMUST00000146324	protein_coding		3	-1	37420186	1264
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000112861	protein_coding	principal1	6	1	117841246	1202
ENSMUSG00000073970	protein_coding	Olfr555	ENSMUST00000098220	protein_coding	principal1	7	1	102658823	948
ENSMUSG00000050174	protein_coding	Nudt6	ENSMUST00000141438	protein_coding		3	-1	37420211	899
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000207062	processed_transcript		9	1	108509479	2150
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000142265	processed_transcript		15	1	83089506	477
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000208074	nonsense_mediated_decay		9	1	108511139	520
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000136061	retained_intron		17	1	47368898	469
ENSMUSG00000024369	protein_coding	Nelfe	ENSMUST00000173357	protein_coding	principal1	17	1	34850398	1399
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000136889	protein_coding		6	1	117841268	659
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000192659	retained_intron		9	1	108511550	600
ENSMUSG00000050174	protein_coding	Nudt6	ENSMUST00000099130	protein_coding	principal3	3	-1	37419590	1070
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000119841	protein_coding		17	1	47369197	1113
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000127778	retained_intron		3	-1	158023140	1670
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000134526	protein_coding		6	1	117841268	543
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000131005	retained_intron		9	1	108513106	621
ENSMUSG00000017929	protein_coding	B4galt5	ENSMUST00000109221	protein_coding	principal1	2	-1	167349183	4210
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000141903	protein_coding		9	1	108513109	461
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000112858	protein_coding		6	1	117841281	650
ENSMUSG00000050174	protein_coding	Nudt6	ENSMUST00000133894	processed_transcript		3	-1	37410675	562
ENSMUSG00000024369	protein_coding	Nelfe	ENSMUST00000173065	protein_coding		17	1	34850408	961
ENSMUSG00000034359	protein_coding	Skint2	ENSMUST00000058791	protein_coding	alternative2	4	1	112613597	1094
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000069025	protein_coding		3	-1	158036551	1643
ENSMUSG00000050174	protein_coding	Nudt6	ENSMUST00000149449	protein_coding		3	-1	37419573	575
ENSMUSG00000017929	protein_coding	B4galt5	ENSMUST00000149698	protein_coding		2	-1	167305698	425
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000143725	retained_intron		17	1	47370108	684
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000112860	protein_coding		6	1	117841281	1231
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000192627	processed_transcript		9	1	108513130	314
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000154039	processed_transcript		17	1	47371712	405
ENSMUSG00000050174	protein_coding	Nudt6	ENSMUST00000198158	nonsense_mediated_decay		3	-1	37419557	573
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000141699	retained_intron		17	1	47372471	779
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000145267	retained_intron		3	-1	158012520	521
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000207734	nonsense_mediated_decay		9	1	108513161	643
ENSMUSG00000024369	protein_coding	Nelfe	ENSMUST00000165953	protein_coding	principal1	17	1	34850408	1381
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000185797	protein_coding	alternative1	1	-1	75317659	2510
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000132644	retained_intron		6	1	117843253	905
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000152497	retained_intron		17	1	47375471	3878
ENSMUSG00000000049	protein_coding	Apoh	ENSMUST00000000049	protein_coding	principal1	11	1	108395293	1190
ENSMUSG00000017929	protein_coding	B4galt5	ENSMUST00000155623	processed_transcript		2	-1	167313855	361
ENSMUSG00000050174	protein_coding	Nudt6	ENSMUST00000138949	protein_coding		3	-1	37419566	378
ENSMUSG00000081044	protein_coding	AU015836	ENSMUST00000121565	protein_coding		X	1	93968659	2997
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000154311	retained_intron		9	1	108513544	417
ENSMUSG00000034359	protein_coding	Skint2	ENSMUST00000186969	protein_coding	principal2	4	1	112613740	1258
ENSMUSG00000024369	protein_coding	Nelfe	ENSMUST00000173775	retained_intron		17	1	34852608	499
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000185419	protein_coding		1	-1	75316993	2833
ENSMUSG00000017929	protein_coding	B4galt5	ENSMUST00000133557	processed_transcript		2	-1	167313900	361
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000156303	retained_intron		3	-1	158013147	474
ENSMUSG00000081044	protein_coding	AU015836	ENSMUST00000149545	nonsense_mediated_decay		X	1	93968674	2464
ENSMUSG00000000049	protein_coding	Apoh	ENSMUST00000133383	protein_coding		11	1	108343354	367
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000223041	protein_coding		6	1	117841254	1128
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000141780	retained_intron		9	1	108513726	466
ENSMUSG00000024369	protein_coding	Nelfe	ENSMUST00000174888	retained_intron		17	1	34853936	425
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000198705	protein_coding		3	-1	158022004	526
ENSMUSG00000000049	protein_coding	Apoh	ENSMUST00000146050	protein_coding		11	1	108381164	374
ENSMUSG00000059689	protein_coding	Zfp637	ENSMUST00000164472	protein_coding	principal1	6	1	117841242	1098
ENSMUSG00000024369	protein_coding	Nelfe	ENSMUST00000174075	retained_intron		17	1	34854256	420
ENSMUSG00000054779	antisense	Fgf2os	ENSMUST00000153785	antisense		3	-1	37349740	1441
ENSMUSG00000042894	protein_coding	Olfr1260	ENSMUST00000216744	processed_transcript		2	1	89974340	2292
ENSMUSG00000081044	protein_coding	AU015836	ENSMUST00000124180	processed_transcript		X	1	93969642	627
ENSMUSG00000000049	protein_coding	Apoh	ENSMUST00000152958	protein_coding		11	1	108381169	731
ENSMUSG00000042894	protein_coding	Olfr1260	ENSMUST00000213162	processed_transcript		2	1	89974459	2202
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000194045	nonsense_mediated_decay		9	1	108514065	760
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000199520	retained_intron		3	-1	158023669	1074
ENSMUSG00000042894	protein_coding	Olfr1260	ENSMUST00000214630	protein_coding		2	1	89974593	888
ENSMUSG00000081044	protein_coding	AU015836	ENSMUST00000120624	protein_coding		X	1	93969796	674
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000208506	nonsense_mediated_decay		9	1	108514127	729
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000126377	retained_intron		3	-1	158018114	437
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000113605	protein_coding	principal3	1	-1	75316945	1571
ENSMUSG00000081044	protein_coding	AU015836	ENSMUST00000163458	protein_coding	principal1	X	1	93968682	911
ENSMUSG00000034729	protein_coding	Mrps10	ENSMUST00000060752	protein_coding		17	1	47369197	1109
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000207790	nonsense_mediated_decay		9	1	108514173	671
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000168029	protein_coding		15	1	83089508	718
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000187836	protein_coding	principal3	1	-1	75317149	1862
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000126716	nonsense_mediated_decay		3	-1	158036596	940
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000208177	protein_coding		9	1	108514191	557
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000167862	protein_coding		15	1	83092883	706
ENSMUSG00000024369	protein_coding	Nelfe	ENSMUST00000097343	protein_coding	principal1	17	1	34850391	1607
ENSMUSG00000105795	antisense	Gm3970	ENSMUST00000198001	antisense		5	1	122025330	334
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000186278	retained_intron		1	-1	75313759	921
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000137444	protein_coding		3	-1	158036615	769
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000207180	nonsense_mediated_decay		9	1	108514204	639
ENSMUSG00000042894	protein_coding	Olfr1260	ENSMUST00000141685	processed_transcript		2	1	89974603	598
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000187791	retained_intron		1	-1	75317409	1268
ENSMUSG00000042894	protein_coding	Olfr1260	ENSMUST00000144613	processed_transcript		2	1	89974604	500
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000140491	nonsense_mediated_decay		3	-1	158031455	397
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000137655	retained_intron		9	1	108514326	697
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000189551	protein_coding		1	-1	75316803	632
ENSMUSG00000042894	protein_coding	Olfr1260	ENSMUST00000111512	protein_coding	principal1	2	1	89974604	4226
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000147304	nonsense_mediated_decay		3	-1	158031571	392
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000208962	nonsense_mediated_decay		9	1	108514545	486
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000187000	protein_coding		1	-1	75317021	944
ENSMUSG00000026614	protein_coding	Slc30a10	ENSMUST00000238198	retained_intron		1	1	185454848	3506
ENSMUSG00000042894	protein_coding	Olfr1260	ENSMUST00000144710	protein_coding		2	1	89974608	819
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000192065	retained_intron		9	1	108514748	448
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000187075	protein_coding		1	-1	75317313	898
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000165371	processed_transcript		15	1	83097071	562
ENSMUSG00000045031	protein_coding	Cetn4	ENSMUST00000071400	protein_coding		3	-1	37312446	1808
ENSMUSG00000042894	protein_coding	Olfr1260	ENSMUST00000216678	protein_coding		2	1	89974618	580
ENSMUSG00000032604	protein_coding	Qars	ENSMUST00000136293	retained_intron		9	1	108514751	543
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000191254	protein_coding		1	-1	75317447	383
ENSMUSG00000042894	protein_coding	Olfr1260	ENSMUST00000061830	protein_coding	principal1	2	1	89977780	933
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000190005	retained_intron		1	-1	75317372	398
ENSMUSG00000111390	antisense	Gm48796	ENSMUST00000217654	antisense		9	1	27098551	3539
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000089922	retained_intron		3	-1	158036606	1309
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000188652	protein_coding		1	-1	75317990	391
ENSMUSG00000026614	protein_coding	Slc30a10	ENSMUST00000061093	protein_coding	principal1	1	1	185454848	5836
ENSMUSG00000034359	protein_coding	Skint2	ENSMUST00000106559	processed_transcript		4	1	112613751	1679
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000133090	retained_intron		3	-1	158036611	2415
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000189282	protein_coding		1	-1	75317382	408
ENSMUSG00000045031	protein_coding	Cetn4	ENSMUST00000102955	protein_coding	principal1	3	-1	37312446	1064
ENSMUSG00000026834	protein_coding	Acvr1c	ENSMUST00000028178	protein_coding	principal1	2	-1	58357895	9162
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000196034	retained_intron		3	-1	158031760	642
ENSMUSG00000026209	protein_coding	Dnpep	ENSMUST00000066668	protein_coding	principal3	1	-1	75317637	2488
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000199742	retained_intron		3	-1	158031754	1570
ENSMUSG00000026614	protein_coding	Slc30a10	ENSMUST00000238677	nonsense_mediated_decay		1	1	185455038	5684
ENSMUSG00000034359	protein_coding	Skint2	ENSMUST00000106560	protein_coding	alternative2	4	1	112557194	1678
ENSMUSG00000073969	protein_coding	Olfr556	ENSMUST00000217526	protein_coding	principal1	7	1	102664899	3741
ENSMUSG00000055436	protein_coding	Srsf11	ENSMUST00000197292	retained_intron		3	-1	158036614	930
ENSMUSG00000045031	protein_coding	Cetn4	ENSMUST00000140956	protein_coding		3	-1	37312446	2981
ENSMUSG00000073969	protein_coding	Olfr556	ENSMUST00000213485	protein_coding	principal1	7	1	102664899	3825
ENSMUSG00000045031	protein_coding	Cetn4	ENSMUST00000075537	protein_coding		3	-1	37312420	762
ENSMUSG00000115143	processed_pseudogene	Fkbp1a-ps1	ENSMUST00000227724	processed_pseudogene		14	-1	76636864	328
ENSMUSG00000097615	antisense	Gm2061	ENSMUST00000180623	antisense		1	-1	185455568	2761
ENSMUSG00000031990	protein_coding	Jam3	ENSMUST00000034472	protein_coding	principal1	9	-1	27155393	1942
ENSMUSG00000045031	protein_coding	Cetn4	ENSMUST00000125252	protein_coding		3	-1	37312708	592
ENSMUSG00000073969	protein_coding	Olfr556	ENSMUST00000098219	protein_coding	principal1	7	1	102669901	1023
ENSMUSG00000105134	TEC	Gm42923	ENSMUST00000198438	TEC		3	-1	37395101	2896
ENSMUSG00000026834	protein_coding	Acvr1c	ENSMUST00000100085	protein_coding		2	-1	58324807	4289
ENSMUSG00000043020	protein_coding	Wdr63	ENSMUST00000160285	protein_coding	principal1	3	-1	146108130	3176
ENSMUSG00000083114	processed_pseudogene	Gm14790	ENSMUST00000117760	processed_pseudogene		X	-1	93982469	1293
ENSMUSG00000033278	protein_coding	Ptprm	ENSMUST00000037974	protein_coding	alternative1	17	-1	67354073	5186
ENSMUSG00000026834	protein_coding	Acvr1c	ENSMUST00000112608	protein_coding		2	-1	58357752	1497
ENSMUSG00000080995	processed_pseudogene	Gm15165	ENSMUST00000118140	processed_pseudogene		X	-1	93988819	502
ENSMUSG00000026834	protein_coding	Acvr1c	ENSMUST00000112607	protein_coding		2	-1	58357752	1266
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000064091	protein_coding	principal1	1	-1	119837613	10874
ENSMUSG00000096574	protein_coding	Gm2956	ENSMUST00000177786	protein_coding	principal1	14	1	3332627	1955
ENSMUSG00000043020	protein_coding	Wdr63	ENSMUST00000162572	processed_transcript		3	-1	146047185	770
ENSMUSG00000022490	protein_coding	Ppp1r1a	ENSMUST00000023133	protein_coding	principal1	15	-1	103538003	1306
ENSMUSG00000033278	protein_coding	Ptprm	ENSMUST00000223982	protein_coding	principal2	17	-1	67354387	4802
ENSMUSG00000026834	protein_coding	Acvr1c	ENSMUST00000154453	protein_coding		2	-1	58324807	392
ENSMUSG00000096574	protein_coding	Gm2956	ENSMUST00000178722	protein_coding		14	1	3348089	450
ENSMUSG00000043020	protein_coding	Wdr63	ENSMUST00000161104	processed_transcript		3	-1	146048437	599
ENSMUSG00000096216	processed_pseudogene	Gm21959	ENSMUST00000178439	processed_pseudogene		13	-1	76684433	452
ENSMUSG00000081055	processed_pseudogene	Gm6987	ENSMUST00000119319	processed_pseudogene		X	1	94023860	428
ENSMUSG00000110352	unprocessed_pseudogene	Gm45687	ENSMUST00000209454	unprocessed_pseudogene		7	1	102676536	155
ENSMUSG00000090119	processed_pseudogene	Gm8185	ENSMUST00000160999	processed_pseudogene		13	1	76935163	669
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000166624	nonsense_mediated_decay		1	-1	119687637	2692
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000078218	protein_coding	principal2	15	1	83100204	1371
ENSMUSG00000022490	protein_coding	Ppp1r1a	ENSMUST00000228813	processed_transcript		15	-1	103537994	821
ENSMUSG00000033278	protein_coding	Ptprm	ENSMUST00000225074	retained_intron		17	-1	66694033	2713
ENSMUSG00000031990	protein_coding	Jam3	ENSMUST00000215446	processed_transcript		9	-1	27126550	863
ENSMUSG00000090318	processed_pseudogene	Gm17223	ENSMUST00000171413	processed_pseudogene		14	-1	3363262	481
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000163435	protein_coding		1	-1	119837347	2365
ENSMUSG00000031990	protein_coding	Jam3	ENSMUST00000213170	processed_transcript		9	-1	27148735	731
ENSMUSG00000097511	lincRNA	Gm16677	ENSMUST00000181229	lincRNA		14	-1	69337082	2174
ENSMUSG00000033278	protein_coding	Ptprm	ENSMUST00000224091	protein_coding		17	-1	67354457	3773
ENSMUSG00000031990	protein_coding	Jam3	ENSMUST00000167074	retained_intron		9	-1	27155418	1234
ENSMUSG00000097511	lincRNA	Gm16677	ENSMUST00000229870	lincRNA		14	-1	69337097	510
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000164269	nonsense_mediated_decay		1	-1	119741436	569
ENSMUSG00000031990	protein_coding	Jam3	ENSMUST00000213682	retained_intron		9	-1	27155421	597
ENSMUSG00000097511	lincRNA	Gm16677	ENSMUST00000229002	lincRNA		14	-1	69337114	551
ENSMUSG00000046182	protein_coding	Gsg1l	ENSMUST00000073935	protein_coding	principal1	7	-1	126082411	3923
ENSMUSG00000033278	protein_coding	Ptprm	ENSMUST00000225554	nonsense_mediated_decay		17	-1	66817875	590
ENSMUSG00000097511	lincRNA	Gm16677	ENSMUST00000229604	lincRNA		14	-1	69337165	629
ENSMUSG00000021256	protein_coding	Vash1	ENSMUST00000021681	protein_coding	principal1	12	1	86678700	2599
ENSMUSG00000095533	protein_coding	Gm10413	ENSMUST00000112728	protein_coding	principal5	14	1	3395093	984
ENSMUSG00000110836	lincRNA	Gm48801	ENSMUST00000216094	lincRNA		9	-1	27203298	457
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000168808	retained_intron		1	-1	119715993	463
ENSMUSG00000022525	protein_coding	Plaat1	ENSMUST00000089824	protein_coding	principal1	16	1	29209695	2916
ENSMUSG00000095533	protein_coding	Gm10413	ENSMUST00000177913	protein_coding	alternative2	14	1	3395156	612
ENSMUSG00000108376	TEC	Gm44874	ENSMUST00000206586	TEC		7	-1	126064447	1542
ENSMUSG00000050965	protein_coding	Prkca	ENSMUST00000059595	protein_coding	principal1	11	-1	108343928	8409
ENSMUSG00000033278	protein_coding	Ptprm	ENSMUST00000225688	retained_intron		17	-1	66944442	1674
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000167645	retained_intron		15	1	83100213	1417
ENSMUSG00000022525	protein_coding	Plaat1	ENSMUST00000162747	protein_coding	principal1	16	1	29210108	854
ENSMUSG00000111387	lincRNA	Gm48803	ENSMUST00000217080	lincRNA		9	-1	27293344	651
ENSMUSG00000022491	protein_coding	Glycam1	ENSMUST00000226679	retained_intron		15	-1	103565070	2084
ENSMUSG00000050965	protein_coding	Prkca	ENSMUST00000134725	processed_transcript		11	-1	108343648	541
ENSMUSG00000033278	protein_coding	Ptprm	ENSMUST00000224862	protein_coding		17	-1	67047985	754
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000172101	retained_intron		15	1	83100263	811
ENSMUSG00000022525	protein_coding	Plaat1	ENSMUST00000160794	processed_transcript		16	1	29210130	412
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000163179	nonsense_mediated_decay		1	-1	119783502	600
ENSMUSG00000114540	processed_pseudogene	Gm6421	ENSMUST00000225588	processed_pseudogene		13	-1	117358620	409
ENSMUSG00000050965	protein_coding	Prkca	ENSMUST00000134910	processed_transcript		11	-1	108012805	678
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000169702	retained_intron		15	1	83100289	521
ENSMUSG00000022525	protein_coding	Plaat1	ENSMUST00000161294	nonsense_mediated_decay		16	1	29210170	478
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000168429	protein_coding		1	-1	119802422	431
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000111752	protein_coding	principal1	5	-1	122049851	8784
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000167389	protein_coding		15	1	83100294	210
ENSMUSG00000050965	protein_coding	Prkca	ENSMUST00000100302	protein_coding		11	-1	107979639	2265
ENSMUSG00000081066	unprocessed_pseudogene	Gm12817	ENSMUST00000119622	unprocessed_pseudogene		4	1	112705170	610
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000166427	protein_coding	alternative2	15	1	83100294	2577
ENSMUSG00000112272	processed_pseudogene	Gm48087	ENSMUST00000220140	processed_pseudogene		10	-1	89555719	637
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000086317	protein_coding	principal1	5	-1	122047825	5113
ENSMUSG00000084978	antisense	Gm11655	ENSMUST00000153899	antisense		11	1	108181850	765
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000171212	retained_intron		15	1	83101565	754
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000166422	nonsense_mediated_decay		1	-1	119837071	554
ENSMUSG00000078955	sense_intronic	Gm14222	ENSMUST00000128681	sense_intronic		2	1	160583357	575
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000167635	retained_intron		15	1	83103697	1013
ENSMUSG00000086078	antisense	Gm11657	ENSMUST00000137175	antisense		11	1	107994022	337
ENSMUSG00000049401	protein_coding	Ogfr	ENSMUST00000029087	protein_coding	principal1	2	1	180589245	2449
ENSMUSG00000022505	protein_coding	Emp2	ENSMUST00000078357	protein_coding	principal1	16	-1	10313968	3440
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000197179	retained_intron		5	-1	121866063	1560
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000164817	retained_intron		15	1	83103919	3237
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000168303	protein_coding		1	-1	119837071	460
ENSMUSG00000084916	sense_intronic	Gm11656	ENSMUST00000139207	sense_intronic		11	1	108377877	360
ENSMUSG00000078956	lincRNA	Gm14221	ENSMUST00000109473	lincRNA		2	-1	160619971	340
ENSMUSG00000036853	protein_coding	Mcoln3	ENSMUST00000140214	protein_coding		3	1	146117450	477
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000171488	retained_intron		15	1	83103921	685
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000156942	retained_intron		5	-1	121874324	821
ENSMUSG00000084916	sense_intronic	Gm11656	ENSMUST00000137462	sense_intronic		11	1	108377893	395
ENSMUSG00000022505	protein_coding	Emp2	ENSMUST00000230141	retained_intron		16	-1	10313871	5264
ENSMUSG00000049401	protein_coding	Ogfr	ENSMUST00000147070	retained_intron		2	1	180589462	734
ENSMUSG00000078956	lincRNA	Gm14221	ENSMUST00000209603	lincRNA		2	-1	160619971	1437
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000164086	protein_coding		1	-1	119802442	401
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000169814	nonsense_mediated_decay		15	1	83104361	390
ENSMUSG00000118606	processed_pseudogene	AL645535.1	ENSMUST00000239337	processed_pseudogene		11	-1	107945616	66
ENSMUSG00000083446	processed_pseudogene	Gm12826	ENSMUST00000121841	processed_pseudogene		4	-1	117514201	379
ENSMUSG00000026384	protein_coding	Ptpn4	ENSMUST00000163621	protein_coding		1	-1	119836999	431
ENSMUSG00000087640	antisense	Gm14798	ENSMUST00000139695	antisense		X	1	94028854	1189
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000167750	processed_transcript		15	1	83106575	383
ENSMUSG00000021596	protein_coding	Mctp1	ENSMUST00000125209	protein_coding	alternative2	13	1	76384535	4715
ENSMUSG00000022491	protein_coding	Glycam1	ENSMUST00000228895	protein_coding		15	-1	103565056	641
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000133760	processed_transcript		5	-1	121915072	740
ENSMUSG00000101116	processed_pseudogene	Gm28416	ENSMUST00000188334	processed_pseudogene		1	-1	34524007	292
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000170891	processed_transcript		15	1	83112870	405
ENSMUSG00000091876	processed_pseudogene	Gm3851	ENSMUST00000168653	processed_pseudogene		1	1	119787769	318
ENSMUSG00000083544	processed_pseudogene	Oat-rs1	ENSMUST00000122186	processed_pseudogene		X	1	75915216	1311
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000144069	processed_transcript		5	-1	121895381	657
ENSMUSG00000021596	protein_coding	Mctp1	ENSMUST00000126960	protein_coding		13	1	76579674	1780
ENSMUSG00000058586	protein_coding	Serhl	ENSMUST00000169461	retained_intron		15	1	83115487	578
ENSMUSG00000103146	TEC	Gm37745	ENSMUST00000193304	TEC		1	-1	119798925	8163
ENSMUSG00000085598	lincRNA	Gm14715	ENSMUST00000156823	lincRNA		X	-1	75930227	643
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000154139	protein_coding		5	-1	122050102	651
ENSMUSG00000104293	TEC	Gm38043	ENSMUST00000195501	TEC		1	1	156583108	5141
ENSMUSG00000021596	protein_coding	Mctp1	ENSMUST00000109589	protein_coding		13	1	76579728	1653
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000134326	protein_coding		5	-1	122002344	420
ENSMUSG00000048766	protein_coding	Skint10	ENSMUST00000060327	protein_coding	principal1	4	-1	112774825	1376
ENSMUSG00000004709	protein_coding	Cd244a	ENSMUST00000004829	protein_coding	principal1	1	1	171559193	3760
ENSMUSG00000022491	protein_coding	Glycam1	ENSMUST00000023134	protein_coding	principal2	15	-1	103565081	628
ENSMUSG00000080071	unprocessed_pseudogene	Gm15125	ENSMUST00000116185	unprocessed_pseudogene		X	1	148725882	800
ENSMUSG00000095195	protein_coding	Gm3005	ENSMUST00000178728	protein_coding	principal1	14	1	3572023	1955
ENSMUSG00000048766	protein_coding	Skint10	ENSMUST00000068851	protein_coding		4	-1	112774866	493
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000155396	processed_transcript		5	-1	121916734	376
ENSMUSG00000095195	protein_coding	Gm3005	ENSMUST00000178060	protein_coding		14	1	3428103	444
ENSMUSG00000021596	protein_coding	Mctp1	ENSMUST00000137052	retained_intron		13	1	76723687	2278
ENSMUSG00000004709	protein_coding	Cd244a	ENSMUST00000194797	nonsense_mediated_decay		1	1	171559193	1854
ENSMUSG00000048766	protein_coding	Skint10	ENSMUST00000137128	processed_transcript		4	-1	112774827	2149
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000125267	processed_transcript		5	-1	122047891	341
ENSMUSG00000082995	unprocessed_pseudogene	Gm15126	ENSMUST00000118631	unprocessed_pseudogene		X	1	148738112	833
ENSMUSG00000022491	protein_coding	Glycam1	ENSMUST00000228060	protein_coding	alternative2	15	-1	103565054	528
ENSMUSG00000090578	processed_pseudogene	Gm8323	ENSMUST00000168436	processed_pseudogene		14	-1	3480945	1201
ENSMUSG00000021596	protein_coding	Mctp1	ENSMUST00000155275	retained_intron		13	1	76825207	571
ENSMUSG00000042589	protein_coding	Cux2	ENSMUST00000168288	protein_coding	principal1	5	-1	121924921	4697
ENSMUSG00000004709	protein_coding	Cd244a	ENSMUST00000194170	retained_intron		1	1	171559194	1331
ENSMUSG00000094880	unprocessed_pseudogene	Gm11109	ENSMUST00000180289	unprocessed_pseudogene		14	1	3512378	384
ENSMUSG00000083256	processed_pseudogene	Kars-ps1	ENSMUST00000122077	processed_pseudogene		X	1	148788557	1767
ENSMUSG00000004709	protein_coding	Cd244a	ENSMUST00000195804	retained_intron		1	1	171579063	2743
ENSMUSG00000021596	protein_coding	Mctp1	ENSMUST00000122843	retained_intron		13	1	76825446	1830
ENSMUSG00000087386	antisense	Gm15637	ENSMUST00000135544	antisense		5	1	122048382	817
ENSMUSG00000115819	processed_pseudogene	Gm9108	ENSMUST00000228186	processed_pseudogene		15	-1	103588368	1425
ENSMUSG00000021596	protein_coding	Mctp1	ENSMUST00000149028	retained_intron		13	1	76825483	917
ENSMUSG00000097382	processed_pseudogene	Gm26817	ENSMUST00000180446	processed_pseudogene		14	-1	3442523	339
ENSMUSG00000079435	protein_coding	Rpl36a	ENSMUST00000113211	protein_coding	principal1	X	1	134585654	483
ENSMUSG00000115329	lincRNA	Gm49272	ENSMUST00000228461	lincRNA		15	1	103649792	1498
ENSMUSG00000021596	protein_coding	Mctp1	ENSMUST00000109583	protein_coding	principal2	13	1	76579674	2283
ENSMUSG00000096488	protein_coding	Gm10409	ENSMUST00000170123	protein_coding	principal1	14	1	3412614	1933
ENSMUSG00000026596	protein_coding	Abl2	ENSMUST00000173929	protein_coding		1	1	156558786	680
ENSMUSG00000108035	TEC	Gm44021	ENSMUST00000203055	TEC		6	-1	148364656	3516
ENSMUSG00000114293	processed_pseudogene	Gm48078	ENSMUST00000225003	processed_pseudogene		13	1	76439331	340
ENSMUSG00000096905	processed_pseudogene	Gm8324	ENSMUST00000178911	processed_pseudogene		14	-1	3497570	1204
ENSMUSG00000108148	antisense	Gm44020	ENSMUST00000204618	antisense		6	1	148358795	664
ENSMUSG00000115030	unprocessed_pseudogene	Gm49274	ENSMUST00000227580	unprocessed_pseudogene		15	-1	103661512	408
ENSMUSG00000090027	processed_pseudogene	Gm15740	ENSMUST00000159703	processed_pseudogene		13	1	76696619	1292
ENSMUSG00000063171	transcribed_processed_pseudogene	Rps4l	ENSMUST00000071745	processed_transcript		6	1	148354656	943
ENSMUSG00000115279	processed_pseudogene	Gm49273	ENSMUST00000228191	processed_pseudogene		15	1	103657839	3843
ENSMUSG00000072739	protein_coding	Gm10408	ENSMUST00000096168	protein_coding	principal1	14	1	3449379	1512
ENSMUSG00000036853	protein_coding	Mcoln3	ENSMUST00000039450	protein_coding	principal1	3	1	146121672	2991
ENSMUSG00000063171	transcribed_processed_pseudogene	Rps4l	ENSMUST00000204242	transcribed_processed_pseudogene		6	1	148354710	789
ENSMUSG00000079435	protein_coding	Rpl36a	ENSMUST00000172023	retained_intron		X	1	134585689	812
ENSMUSG00000115053	unprocessed_pseudogene	Gm49275	ENSMUST00000226749	unprocessed_pseudogene		15	-1	103661982	97
ENSMUSG00000036853	protein_coding	Mcoln3	ENSMUST00000146689	retained_intron		3	1	146139080	698
ENSMUSG00000079435	protein_coding	Rpl36a	ENSMUST00000170828	nonsense_mediated_decay		X	1	134585690	452
ENSMUSG00000082199	processed_pseudogene	Gm15763	ENSMUST00000120136	processed_pseudogene		6	1	148261150	403
ENSMUSG00000115489	processed_pseudogene	Gm49129	ENSMUST00000227780	processed_pseudogene		14	1	34084753	333
ENSMUSG00000079435	protein_coding	Rpl36a	ENSMUST00000149857	retained_intron		X	1	134585701	770
ENSMUSG00000079435	protein_coding	Rpl36a	ENSMUST00000169457	retained_intron		X	1	134586090	600
ENSMUSG00000061295	protein_coding	Olfr1261	ENSMUST00000111509	protein_coding		2	1	89991221	519
ENSMUSG00000079435	protein_coding	Rpl36a	ENSMUST00000152266	retained_intron		X	1	134587081	553
ENSMUSG00000079387	protein_coding	Luzp4	ENSMUST00000101185	protein_coding	alternative2	X	1	148857640	2023
ENSMUSG00000060311	protein_coding	Mucl1	ENSMUST00000226484	protein_coding	principal5	15	-1	103755469	758
ENSMUSG00000079387	protein_coding	Luzp4	ENSMUST00000163338	protein_coding	principal2	X	1	148882576	2025
ENSMUSG00000094712	antisense	Gm15099	ENSMUST00000179833	antisense		X	-1	148882544	573
ENSMUSG00000061295	protein_coding	Olfr1261	ENSMUST00000213909	protein_coding	principal1	2	1	89991238	2912
ENSMUSG00000101009	processed_transcript	1700108F19Rik	ENSMUST00000189375	lincRNA		14	1	76672963	494
ENSMUSG00000060311	protein_coding	Mucl1	ENSMUST00000078842	protein_coding	alternative2	15	-1	103755439	621
ENSMUSG00000083011	processed_pseudogene	Gm12816	ENSMUST00000118069	processed_pseudogene		4	-1	112956286	1212
ENSMUSG00000116074	processed_pseudogene	Gm49491	ENSMUST00000230399	processed_pseudogene		15	-1	103804910	265
ENSMUSG00000061295	protein_coding	Olfr1261	ENSMUST00000216953	protein_coding	principal1	2	1	89991474	3176
ENSMUSG00000085878	antisense	Gm12823	ENSMUST00000134494	antisense		4	1	112923696	318
ENSMUSG00000095994	unprocessed_pseudogene	Gm15084	ENSMUST00000178585	unprocessed_pseudogene		X	1	148946235	1502
ENSMUSG00000082678	processed_pseudogene	Gm12818	ENSMUST00000117562	processed_pseudogene		4	-1	112979813	1349
ENSMUSG00000061295	protein_coding	Olfr1261	ENSMUST00000077785	protein_coding	principal1	2	1	89993395	921
ENSMUSG00000115448	processed_pseudogene	Gm21178	ENSMUST00000227184	processed_pseudogene		15	1	103827252	728
ENSMUSG00000079509	protein_coding	Zfx	ENSMUST00000088102	protein_coding	principal1	X	-1	94123407	7002
ENSMUSG00000083778	unprocessed_pseudogene	Gm15094	ENSMUST00000118394	unprocessed_pseudogene		X	1	148958712	1131
ENSMUSG00000083231	processed_pseudogene	Gm15096	ENSMUST00000121918	processed_pseudogene		X	1	149008973	878
ENSMUSG00000070544	protein_coding	Top1	ENSMUST00000109468	protein_coding	principal1	2	1	160645888	3856
ENSMUSG00000079509	protein_coding	Zfx	ENSMUST00000113926	protein_coding	principal1	X	-1	94122900	6762
ENSMUSG00000101009	processed_transcript	1700108F19Rik	ENSMUST00000190818	lincRNA		14	1	76677566	1412
ENSMUSG00000101009	processed_transcript	1700108F19Rik	ENSMUST00000185809	retained_intron		14	1	76677579	2252
ENSMUSG00000079509	protein_coding	Zfx	ENSMUST00000137853	protein_coding		X	-1	94123375	1136
ENSMUSG00000070544	protein_coding	Top1	ENSMUST00000133262	processed_transcript		2	1	160645980	3783
ENSMUSG00000079509	protein_coding	Zfx	ENSMUST00000113925	protein_coding		X	-1	94123109	879
ENSMUSG00000070544	protein_coding	Top1	ENSMUST00000129289	retained_intron		2	1	160670133	698
ENSMUSG00000079509	protein_coding	Zfx	ENSMUST00000135661	processed_transcript		X	-1	94123702	437
ENSMUSG00000040249	protein_coding	Lrp1	ENSMUST00000049149	protein_coding	principal1	10	-1	127621148	14888
ENSMUSG00000070544	protein_coding	Top1	ENSMUST00000164694	retained_intron		2	1	160685669	2172
ENSMUSG00000101009	processed_transcript	1700108F19Rik	ENSMUST00000191266	lincRNA		14	1	76677579	857
ENSMUSG00000079509	protein_coding	Zfx	ENSMUST00000130312	retained_intron		X	-1	94123132	427
ENSMUSG00000021565	protein_coding	Slc6a19	ENSMUST00000022048	protein_coding	principal1	13	-1	73700780	3936
ENSMUSG00000101009	processed_transcript	1700108F19Rik	ENSMUST00000185213	lincRNA		14	1	76677607	621
ENSMUSG00000070544	protein_coding	Top1	ENSMUST00000164510	processed_transcript		2	1	160702143	590
ENSMUSG00000079509	protein_coding	Zfx	ENSMUST00000113927	protein_coding	principal1	X	-1	94123407	6933
ENSMUSG00000070544	protein_coding	Top1	ENSMUST00000150039	retained_intron		2	1	160717469	599
ENSMUSG00000101009	processed_transcript	1700108F19Rik	ENSMUST00000188798	lincRNA		14	1	76677610	619
ENSMUSG00000101009	processed_transcript	1700108F19Rik	ENSMUST00000191447	lincRNA		14	1	76677654	660
ENSMUSG00000101009	processed_transcript	1700108F19Rik	ENSMUST00000191384	lincRNA		14	1	76681754	210
ENSMUSG00000026994	protein_coding	Galnt3	ENSMUST00000028378	protein_coding	principal1	2	-1	66124994	3885
ENSMUSG00000032322	protein_coding	Pstpip1	ENSMUST00000059206	protein_coding	principal1	9	1	56089962	1863
ENSMUSG00000081106	processed_pseudogene	Gm7155	ENSMUST00000121143	processed_pseudogene		X	-1	75973123	1671
ENSMUSG00000100274	sense_intronic	1700006F04Rik	ENSMUST00000188582	sense_intronic		14	1	119749225	441
ENSMUSG00000040249	protein_coding	Lrp1	ENSMUST00000125480	retained_intron		10	-1	127621148	3436
ENSMUSG00000115709	lincRNA	4930431P22Rik	ENSMUST00000228541	lincRNA		14	1	76760131	715
ENSMUSG00000026994	protein_coding	Galnt3	ENSMUST00000153563	processed_transcript		2	-1	66102483	573
ENSMUSG00000115684	processed_pseudogene	Gm6087	ENSMUST00000227446	processed_pseudogene		14	1	119278424	663
ENSMUSG00000082755	processed_pseudogene	Gm8692	ENSMUST00000118102	processed_pseudogene		X	-1	75987615	438
ENSMUSG00000036925	protein_coding	Mucl2	ENSMUST00000037685	protein_coding	principal2	15	-1	103899312	639
ENSMUSG00000040249	protein_coding	Lrp1	ENSMUST00000121829	protein_coding		10	-1	127620970	2887
ENSMUSG00000115817	lincRNA	Gm30246	ENSMUST00000226490	lincRNA		14	1	76780827	3000
ENSMUSG00000053465	protein_coding	Hs6st3	ENSMUST00000065904	protein_coding	principal1	14	1	119138341	1708
ENSMUSG00000026994	protein_coding	Galnt3	ENSMUST00000150793	processed_transcript		2	-1	66094071	673
ENSMUSG00000104957	processed_pseudogene	Gm43354	ENSMUST00000196862	processed_pseudogene		3	1	127512900	346
ENSMUSG00000026994	protein_coding	Galnt3	ENSMUST00000155453	processed_transcript		2	-1	66095224	754
ENSMUSG00000040249	protein_coding	Lrp1	ENSMUST00000133620	protein_coding		10	-1	127583460	292
ENSMUSG00000115353	lincRNA	Gm48968	ENSMUST00000227572	lincRNA		14	1	76832821	295
ENSMUSG00000036925	protein_coding	Mucl2	ENSMUST00000226584	protein_coding	alternative2	15	-1	103899290	823
ENSMUSG00000115639	sense_intronic	4930404K13Rik	ENSMUST00000228885	sense_intronic		14	1	119798978	743
ENSMUSG00000087194	protein_coding	Skint6	ENSMUST00000138966	protein_coding	principal1	4	-1	113286973	3824
ENSMUSG00000115596	lincRNA	Gm48969	ENSMUST00000227341	lincRNA		14	1	76861571	603
ENSMUSG00000115223	processed_pseudogene	Gm48985	ENSMUST00000228289	processed_pseudogene		14	-1	119785094	336
ENSMUSG00000040249	protein_coding	Lrp1	ENSMUST00000129877	retained_intron		10	-1	127581885	550
ENSMUSG00000115196	processed_pseudogene	Gm6212	ENSMUST00000226465	processed_pseudogene		14	1	119644012	220
ENSMUSG00000040249	protein_coding	Lrp1	ENSMUST00000129727	nonsense_mediated_decay		10	-1	127549917	679
ENSMUSG00000087194	protein_coding	Skint6	ENSMUST00000171224	protein_coding	principal1	4	-1	113283642	3723
ENSMUSG00000040249	protein_coding	Lrp1	ENSMUST00000145947	retained_intron		10	-1	127543208	600
ENSMUSG00000040249	protein_coding	Lrp1	ENSMUST00000140269	retained_intron		10	-1	127540142	782
ENSMUSG00000040249	protein_coding	Lrp1	ENSMUST00000135188	retained_intron		10	-1	127539597	763
ENSMUSG00000040249	protein_coding	Lrp1	ENSMUST00000118455	protein_coding		10	-1	127620922	2097
ENSMUSG00000086499	antisense	Gm16217	ENSMUST00000124182	antisense		10	1	127596548	616
ENSMUSG00000021565	protein_coding	Slc6a19	ENSMUST00000120322	processed_transcript		13	-1	73692636	3592
ENSMUSG00000031778	protein_coding	Cx3cl1	ENSMUST00000034230	protein_coding	principal1	8	1	94772009	3315
ENSMUSG00000021565	protein_coding	Slc6a19	ENSMUST00000132085	retained_intron		13	-1	73700695	4192
ENSMUSG00000021565	protein_coding	Slc6a19	ENSMUST00000123997	processed_transcript		13	-1	73704865	839
ENSMUSG00000021565	protein_coding	Slc6a19	ENSMUST00000139087	processed_transcript		13	-1	73692379	745
ENSMUSG00000021565	protein_coding	Slc6a19	ENSMUST00000124406	nonsense_mediated_decay		13	-1	73700681	607
ENSMUSG00000031778	protein_coding	Cx3cl1	ENSMUST00000211956	protein_coding		8	1	94772204	470
ENSMUSG00000031266	protein_coding	Gla	ENSMUST00000033621	protein_coding	alternative2	X	-1	134601125	3172
ENSMUSG00000032322	protein_coding	Pstpip1	ENSMUST00000138646	retained_intron		9	1	56089976	2822
ENSMUSG00000021565	protein_coding	Slc6a19	ENSMUST00000140878	processed_transcript		13	-1	73692254	360
ENSMUSG00000031266	protein_coding	Gla	ENSMUST00000153024	protein_coding		X	-1	134600300	337
ENSMUSG00000032322	protein_coding	Pstpip1	ENSMUST00000147360	retained_intron		9	1	56089976	2637
ENSMUSG00000031778	protein_coding	Cx3cl1	ENSMUST00000151783	processed_transcript		8	1	94772204	462
ENSMUSG00000031778	protein_coding	Cx3cl1	ENSMUST00000135970	nonsense_mediated_decay		8	1	94772204	432
ENSMUSG00000081238	processed_pseudogene	Gm15836	ENSMUST00000119952	processed_pseudogene		14	-1	57436513	793
ENSMUSG00000021950	protein_coding	Anxa8	ENSMUST00000022519	protein_coding	principal1	14	1	34085981	1880
ENSMUSG00000031778	protein_coding	Cx3cl1	ENSMUST00000211947	protein_coding		8	1	94772204	377
ENSMUSG00000034560	protein_coding	Washc4	ENSMUST00000217842	nonsense_mediated_decay		10	1	83543752	5014
ENSMUSG00000021566	antisense	Slc6a19os	ENSMUST00000022049	antisense		13	1	73699826	1532
ENSMUSG00000031266	protein_coding	Gla	ENSMUST00000239113	protein_coding	principal2	X	-1	134601005	3015
ENSMUSG00000032264	protein_coding	Zw10	ENSMUST00000034803	protein_coding	principal1	9	1	49055613	2863
ENSMUSG00000031778	protein_coding	Cx3cl1	ENSMUST00000150307	nonsense_mediated_decay		8	1	94772225	780
ENSMUSG00000021566	antisense	Slc6a19os	ENSMUST00000160958	antisense		13	1	73703716	419
ENSMUSG00000032322	protein_coding	Pstpip1	ENSMUST00000144638	processed_transcript		9	1	56120287	638
ENSMUSG00000032322	protein_coding	Pstpip1	ENSMUST00000135103	retained_intron		9	1	56122090	841
ENSMUSG00000021950	protein_coding	Anxa8	ENSMUST00000120077	protein_coding		14	1	34086025	1208
ENSMUSG00000115303	processed_pseudogene	Gm4291	ENSMUST00000227717	processed_pseudogene		14	1	76976249	639
ENSMUSG00000032264	protein_coding	Zw10	ENSMUST00000215706	retained_intron		9	1	49055782	1272
ENSMUSG00000116270	lincRNA	Gm1600	ENSMUST00000230588	lincRNA		16	-1	10331285	4490
ENSMUSG00000116270	lincRNA	Gm1600	ENSMUST00000229862	lincRNA		16	-1	10347591	315
ENSMUSG00000032264	protein_coding	Zw10	ENSMUST00000213787	nonsense_mediated_decay		9	1	49066707	2013
ENSMUSG00000032322	protein_coding	Pstpip1	ENSMUST00000142894	retained_intron		9	1	56123055	606
ENSMUSG00000032322	protein_coding	Pstpip1	ENSMUST00000132800	retained_intron		9	1	56123055	597
ENSMUSG00000095493	protein_coding	A630023A22Rik	ENSMUST00000178958	protein_coding	principal1	14	-1	34102693	1277
ENSMUSG00000018567	protein_coding	Gabarap	ENSMUST00000018711	protein_coding	principal1	11	1	69991143	1351
ENSMUSG00000030306	protein_coding	Tmtc1	ENSMUST00000060095	protein_coding	principal1	6	-1	148444389	8383
ENSMUSG00000095493	protein_coding	A630023A22Rik	ENSMUST00000215823	processed_transcript		14	-1	34102754	479
ENSMUSG00000030306	protein_coding	Tmtc1	ENSMUST00000100772	protein_coding		6	-1	148444389	8269
ENSMUSG00000094941	protein_coding	Gm15093	ENSMUST00000179021	protein_coding	principal1	X	1	149272377	2022
ENSMUSG00000018567	protein_coding	Gabarap	ENSMUST00000108592	protein_coding		11	1	69991639	750
ENSMUSG00000030306	protein_coding	Tmtc1	ENSMUST00000140797	nonsense_mediated_decay		6	-1	148441635	2245
ENSMUSG00000018567	protein_coding	Gabarap	ENSMUST00000144443	retained_intron		11	1	69991684	932
ENSMUSG00000096899	processed_pseudogene	Gm8346	ENSMUST00000178968	processed_pseudogene		X	1	149211319	1769
ENSMUSG00000018567	protein_coding	Gabarap	ENSMUST00000139007	processed_transcript		11	1	69991807	454
ENSMUSG00000030306	protein_coding	Tmtc1	ENSMUST00000203991	protein_coding		6	-1	148441635	703
ENSMUSG00000096213	unprocessed_pseudogene	Gm15088	ENSMUST00000117973	unprocessed_pseudogene		X	1	149157977	1508
ENSMUSG00000026172	protein_coding	Bcs1l	ENSMUST00000113733	protein_coding	principal1	1	1	74588289	1488
ENSMUSG00000107706	TEC	Gm44022	ENSMUST00000203708	TEC		6	-1	148391329	5429
ENSMUSG00000101803	processed_pseudogene	Gm28419	ENSMUST00000189108	processed_pseudogene		1	-1	34538560	475
ENSMUSG00000026596	protein_coding	Abl2	ENSMUST00000166172	protein_coding	alternative1	1	1	156558987	10151
ENSMUSG00000104451	TEC	Gm37831	ENSMUST00000191685	TEC		3	1	10646316	1787
ENSMUSG00000028031	protein_coding	Dkk2	ENSMUST00000029665	protein_coding	principal1	3	1	132085292	3705
ENSMUSG00000047441	protein_coding	Antxrl	ENSMUST00000226211	protein_coding		14	1	34052707	408
ENSMUSG00000026172	protein_coding	Bcs1l	ENSMUST00000027358	protein_coding	principal1	1	1	74588300	1890
ENSMUSG00000047441	protein_coding	Antxrl	ENSMUST00000227979	protein_coding		14	1	34053177	435
ENSMUSG00000026596	protein_coding	Abl2	ENSMUST00000027888	protein_coding	principal3	1	1	156559049	3549
ENSMUSG00000026172	protein_coding	Bcs1l	ENSMUST00000113732	protein_coding	principal1	1	1	74588374	1679
ENSMUSG00000104185	processed_pseudogene	Gm18692	ENSMUST00000193047	processed_pseudogene		3	-1	10754428	511
ENSMUSG00000026596	protein_coding	Abl2	ENSMUST00000190749	protein_coding		1	1	156615923	807
ENSMUSG00000102185	transcribed_processed_pseudogene	5033404E19Rik	ENSMUST00000194748	processed_transcript		1	1	185487294	1065
ENSMUSG00000102185	transcribed_processed_pseudogene	5033404E19Rik	ENSMUST00000192616	transcribed_processed_pseudogene		1	1	185497388	630
ENSMUSG00000026172	protein_coding	Bcs1l	ENSMUST00000147464	retained_intron		1	1	74590266	432
ENSMUSG00000026124	protein_coding	Cfc1	ENSMUST00000027298	protein_coding	principal1	1	1	34535648	1040
ENSMUSG00000091942	processed_pseudogene	Gm17138	ENSMUST00000165702	processed_pseudogene		12	1	86714986	459
ENSMUSG00000103799	lincRNA	Gm38093	ENSMUST00000195210	lincRNA		1	1	185744803	710
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000195563	protein_coding		9	1	108516806	1085
ENSMUSG00000102470	TEC	Gm37244	ENSMUST00000191748	TEC		3	-1	10774899	1981
ENSMUSG00000037529	protein_coding	Prss40	ENSMUST00000115071	nonsense_mediated_decay		1	-1	34560943	1629
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000195513	protein_coding		9	1	108517087	499
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000192331	processed_transcript		9	1	108517103	962
ENSMUSG00000109618	TEC	Gm45527	ENSMUST00000211052	TEC		7	-1	102686219	774
ENSMUSG00000047441	protein_coding	Antxrl	ENSMUST00000058725	protein_coding	principal1	14	1	34053470	2532
ENSMUSG00000037529	protein_coding	Prss40	ENSMUST00000190790	protein_coding		1	-1	34558111	789
ENSMUSG00000021257	protein_coding	Angel1	ENSMUST00000021682	protein_coding	principal1	12	-1	86726460	3850
ENSMUSG00000040164	protein_coding	Kcns1	ENSMUST00000045196	protein_coding	principal1	2	-1	164171113	2712
ENSMUSG00000008958	protein_coding	Vps72	ENSMUST00000009102	protein_coding	principal1	3	1	95111022	1456
ENSMUSG00000106280	lincRNA	Gm42880	ENSMUST00000198028	lincRNA		3	-1	132445548	459
ENSMUSG00000045427	protein_coding	Hnrnph2	ENSMUST00000074950	protein_coding	principal1	X	1	134601179	2426
ENSMUSG00000008958	protein_coding	Vps72	ENSMUST00000136076	processed_transcript		3	1	95111042	361
ENSMUSG00000037529	protein_coding	Prss40	ENSMUST00000047840	protein_coding	principal1	1	-1	34560920	1275
ENSMUSG00000045427	protein_coding	Hnrnph2	ENSMUST00000113203	protein_coding	principal1	X	1	134601225	2315
ENSMUSG00000073968	protein_coding	Trim68	ENSMUST00000082175	protein_coding	principal1	7	-1	102687327	2388
ENSMUSG00000008958	protein_coding	Vps72	ENSMUST00000125548	processed_transcript		3	1	95111073	956
ENSMUSG00000008958	protein_coding	Vps72	ENSMUST00000139296	processed_transcript		3	1	95114662	770
ENSMUSG00000073968	protein_coding	Trim68	ENSMUST00000210855	protein_coding		7	-1	102687270	2301
ENSMUSG00000008958	protein_coding	Vps72	ENSMUST00000152333	retained_intron		3	1	95116526	2139
ENSMUSG00000021257	protein_coding	Angel1	ENSMUST00000167813	processed_transcript		12	-1	86706169	551
ENSMUSG00000045427	protein_coding	Hnrnph2	ENSMUST00000113202	protein_coding	principal1	X	1	134601258	3988
ENSMUSG00000073968	protein_coding	Trim68	ENSMUST00000210406	retained_intron		7	-1	102679359	632
ENSMUSG00000021257	protein_coding	Angel1	ENSMUST00000165332	processed_transcript		12	-1	86716642	436
ENSMUSG00000091721	protein_coding	Gimd1	ENSMUST00000212804	protein_coding	principal1	3	1	132629820	1462
ENSMUSG00000073968	protein_coding	Trim68	ENSMUST00000209621	retained_intron		7	-1	102687221	943
ENSMUSG00000021257	protein_coding	Angel1	ENSMUST00000167272	processed_transcript		12	-1	86705964	431
ENSMUSG00000040040	protein_coding	Ift88	ENSMUST00000122063	protein_coding	principal1	14	1	57424062	3088
ENSMUSG00000091721	protein_coding	Gimd1	ENSMUST00000212852	protein_coding		3	1	132629822	1234
ENSMUSG00000073968	protein_coding	Trim68	ENSMUST00000209654	retained_intron		7	-1	102687200	890
ENSMUSG00000021257	protein_coding	Angel1	ENSMUST00000163388	processed_transcript		12	-1	86718186	820
ENSMUSG00000045427	protein_coding	Hnrnph2	ENSMUST00000050331	protein_coding	principal1	X	1	134601271	1701
ENSMUSG00000091721	protein_coding	Gimd1	ENSMUST00000212594	protein_coding	principal1	3	1	132630015	1432
ENSMUSG00000004707	protein_coding	Ly9	ENSMUST00000068878	protein_coding	principal2	1	-1	171607410	2488
ENSMUSG00000021257	protein_coding	Angel1	ENSMUST00000171293	processed_transcript		12	-1	86721939	618
ENSMUSG00000019935	protein_coding	Slc17a8	ENSMUST00000020102	protein_coding	principal1	10	-1	89621253	4456
ENSMUSG00000045427	protein_coding	Hnrnph2	ENSMUST00000059297	protein_coding	principal1	X	1	134601286	2364
ENSMUSG00000092300	polymorphic_pseudogene	Cdk3	ENSMUST00000174177	polymorphic_pseudogene	principal1	11	1	116216003	915
ENSMUSG00000004707	protein_coding	Ly9	ENSMUST00000004827	protein_coding		1	-1	171607358	2098
ENSMUSG00000091721	protein_coding	Gimd1	ENSMUST00000163241	protein_coding	principal1	3	1	132630191	1413
ENSMUSG00000083384	unprocessed_pseudogene	Gm12813	ENSMUST00000119615	unprocessed_pseudogene		4	1	113368187	902
ENSMUSG00000019935	protein_coding	Slc17a8	ENSMUST00000105295	protein_coding		10	-1	89599815	1863
ENSMUSG00000099315	antisense	Gm27175	ENSMUST00000183759	antisense		14	1	69502856	606
ENSMUSG00000091721	protein_coding	Gimd1	ENSMUST00000196701	protein_coding	principal1	3	1	132634725	654
ENSMUSG00000103720	TEC	Gm37094	ENSMUST00000193352	TEC		14	-1	69500390	4540
ENSMUSG00000034560	protein_coding	Washc4	ENSMUST00000038388	protein_coding	principal1	10	1	83543941	5858
ENSMUSG00000092300	polymorphic_pseudogene	Cdk3	ENSMUST00000174248	processed_transcript		11	1	116216486	519
ENSMUSG00000102611	TEC	Gm37847	ENSMUST00000192163	TEC		14	1	69502600	1497
ENSMUSG00000040040	protein_coding	Ift88	ENSMUST00000150296	nonsense_mediated_decay		14	1	57424080	562
ENSMUSG00000103323	processed_pseudogene	Gm21631	ENSMUST00000195041	processed_pseudogene		3	-1	11009603	754
ENSMUSG00000034560	protein_coding	Washc4	ENSMUST00000218570	retained_intron		10	1	83579468	636
ENSMUSG00000004707	protein_coding	Ly9	ENSMUST00000143463	nonsense_mediated_decay		1	-1	171607334	2480
ENSMUSG00000034560	protein_coding	Washc4	ENSMUST00000219582	retained_intron		10	1	83585793	656
ENSMUSG00000026087	protein_coding	Mrpl30	ENSMUST00000027256	protein_coding	principal1	1	1	37890477	969
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000032557	protein_coding	alternative2	19	-1	7341819	4488
ENSMUSG00000092300	polymorphic_pseudogene	Cdk3	ENSMUST00000173567	processed_transcript		11	1	116216540	1252
ENSMUSG00000004707	protein_coding	Ly9	ENSMUST00000111277	protein_coding	alternative2	1	-1	171607329	2155
ENSMUSG00000040040	protein_coding	Ift88	ENSMUST00000154492	retained_intron		14	1	57424106	4226
ENSMUSG00000040040	protein_coding	Ift88	ENSMUST00000171682	nonsense_mediated_decay		14	1	57444443	686
ENSMUSG00000081537	processed_pseudogene	Gm37832	ENSMUST00000118935	processed_pseudogene		3	-1	11044358	189
ENSMUSG00000004707	protein_coding	Ly9	ENSMUST00000146596	retained_intron		1	-1	171607360	1583
ENSMUSG00000026087	protein_coding	Mrpl30	ENSMUST00000193673	protein_coding	principal1	1	1	37890532	662
ENSMUSG00000029255	protein_coding	Gnrhr	ENSMUST00000031172	protein_coding	principal1	5	-1	86197870	1211
ENSMUSG00000040040	protein_coding	Ift88	ENSMUST00000139943	retained_intron		14	1	57479646	667
ENSMUSG00000026087	protein_coding	Mrpl30	ENSMUST00000161694	retained_intron		1	1	37890533	356
ENSMUSG00000047591	protein_coding	Mafa	ENSMUST00000062002	protein_coding	principal1	15	-1	75748228	2739
ENSMUSG00000042796	protein_coding	Olfr1032	ENSMUST00000111589	protein_coding	principal1	2	1	86005540	1393
ENSMUSG00000094885	protein_coding	Ott	ENSMUST00000179348	protein_coding	principal1	X	1	149074282	2028
ENSMUSG00000026087	protein_coding	Mrpl30	ENSMUST00000160082	protein_coding		1	1	37890543	1757
ENSMUSG00000029255	protein_coding	Gnrhr	ENSMUST00000113372	protein_coding		5	-1	86197901	2265
ENSMUSG00000094885	protein_coding	Ott	ENSMUST00000177606	protein_coding	principal1	X	1	149088315	2028
ENSMUSG00000042796	protein_coding	Olfr1032	ENSMUST00000079298	protein_coding	principal1	2	1	86006655	1442
ENSMUSG00000086486	antisense	Ift88os	ENSMUST00000149702	antisense		14	-1	57510835	2016
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000164205	protein_coding	alternative1	19	-1	7341799	3104
ENSMUSG00000026087	protein_coding	Mrpl30	ENSMUST00000194857	protein_coding		1	1	37892933	501
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000126854	protein_coding	principal2	15	-1	97767846	4005
ENSMUSG00000029255	protein_coding	Gnrhr	ENSMUST00000094654	protein_coding		5	-1	86197846	1475
ENSMUSG00000042796	protein_coding	Olfr1032	ENSMUST00000062166	protein_coding	principal1	2	1	86007778	933
ENSMUSG00000094885	protein_coding	Ott	ENSMUST00000177554	protein_coding	principal1	X	1	149097952	2028
ENSMUSG00000026087	protein_coding	Mrpl30	ENSMUST00000195373	protein_coding	principal1	1	1	37893935	587
ENSMUSG00000117029	lincRNA	Gm36201	ENSMUST00000233130	lincRNA		17	-1	67629332	2849
ENSMUSG00000086974	antisense	Gm15092	ENSMUST00000138467	antisense		X	-1	149097920	574
ENSMUSG00000026087	protein_coding	Mrpl30	ENSMUST00000162513	retained_intron		1	1	37897256	644
ENSMUSG00000096179	unprocessed_pseudogene	Gm15090	ENSMUST00000118787	unprocessed_pseudogene		X	1	149162650	1196
ENSMUSG00000095463	protein_coding	Entpd4	ENSMUST00000184973	protein_coding	principal1	14	1	69337174	3589
ENSMUSG00000073375	protein_coding	Lrrc30	ENSMUST00000097290	protein_coding	principal1	17	-1	67632723	1760
ENSMUSG00000095463	protein_coding	Entpd4	ENSMUST00000184165	retained_intron		14	1	69337190	2946
ENSMUSG00000095463	protein_coding	Entpd4	ENSMUST00000184314	protein_coding		14	1	69337198	989
ENSMUSG00000027777	protein_coding	Schip1	ENSMUST00000029346	protein_coding		3	1	68064802	2201
ENSMUSG00000095463	protein_coding	Entpd4	ENSMUST00000183648	processed_transcript		14	1	69337216	418
ENSMUSG00000084831	unprocessed_pseudogene	Gm14710	ENSMUST00000146082	unprocessed_pseudogene		X	-1	76162605	1066
ENSMUSG00000027777	protein_coding	Schip1	ENSMUST00000169909	protein_coding		3	1	68064802	1517
ENSMUSG00000095463	protein_coding	Entpd4	ENSMUST00000184234	retained_intron		14	1	69362559	2623
ENSMUSG00000095463	protein_coding	Entpd4	ENSMUST00000064831	protein_coding	principal1	14	1	69347587	1842
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000129223	protein_coding		15	-1	97767798	3750
ENSMUSG00000102660	TEC	Gm38378	ENSMUST00000195153	TEC		14	-1	69397771	2268
ENSMUSG00000056699	lincRNA	Gm5533	ENSMUST00000070987	lincRNA		1	-1	181853189	1343
ENSMUSG00000085823	antisense	Gm13012	ENSMUST00000155349	antisense		4	-1	137883926	849
ENSMUSG00000085823	antisense	Gm13012	ENSMUST00000156022	antisense		4	-1	137883937	654
ENSMUSG00000085823	antisense	Gm13012	ENSMUST00000152368	antisense		4	-1	137883412	714
ENSMUSG00000113683	antisense	Gm47123	ENSMUST00000221233	antisense		13	1	64361052	1742
ENSMUSG00000027777	protein_coding	Schip1	ENSMUST00000182532	protein_coding		3	1	68468183	2059
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000193258	protein_coding		9	1	108517103	2291
ENSMUSG00000114072	processed_pseudogene	Gm49230	ENSMUST00000221966	processed_pseudogene		13	-1	64361737	395
ENSMUSG00000042097	protein_coding	Zfp239	ENSMUST00000136316	processed_transcript		6	1	117862100	716
ENSMUSG00000093954	protein_coding	Gm16867	ENSMUST00000183917	nonsense_mediated_decay		14	-1	69503320	3593
ENSMUSG00000027777	protein_coding	Schip1	ENSMUST00000192555	protein_coding		3	1	68493491	1298
ENSMUSG00000093954	protein_coding	Gm16867	ENSMUST00000184816	nonsense_mediated_decay		14	-1	69503226	3191
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000128775	protein_coding		15	-1	97767664	3586
ENSMUSG00000082827	unprocessed_pseudogene	Gm5397	ENSMUST00000121081	unprocessed_pseudogene		X	1	76196108	1453
ENSMUSG00000025887	protein_coding	Casp12	ENSMUST00000027009	protein_coding	principal1	9	1	5345430	2649
ENSMUSG00000034282	protein_coding	Evpl	ENSMUST00000037007	protein_coding	principal1	11	-1	116238077	6384
ENSMUSG00000093954	protein_coding	Gm16867	ENSMUST00000183695	nonsense_mediated_decay		14	-1	69503236	2166
ENSMUSG00000083566	unprocessed_pseudogene	Gm14711	ENSMUST00000117056	unprocessed_pseudogene		X	1	76227109	217
ENSMUSG00000025887	protein_coding	Casp12	ENSMUST00000151788	nonsense_mediated_decay		9	1	5345476	2463
ENSMUSG00000027777	protein_coding	Schip1	ENSMUST00000182719	protein_coding		3	1	68494208	2156
ENSMUSG00000093954	protein_coding	Gm16867	ENSMUST00000183840	nonsense_mediated_decay		14	-1	69503362	1087
ENSMUSG00000093954	protein_coding	Gm16867	ENSMUST00000184039	processed_transcript		14	-1	69426477	602
ENSMUSG00000086104	antisense	Gm14707	ENSMUST00000152793	antisense		X	-1	76244272	398
ENSMUSG00000027777	protein_coding	Schip1	ENSMUST00000170788	protein_coding	principal2	3	1	68572245	1730
ENSMUSG00000093954	protein_coding	Gm16867	ENSMUST00000179116	protein_coding	principal1	14	-1	69503362	3084
ENSMUSG00000027482	protein_coding	Bpifa3	ENSMUST00000028984	protein_coding	principal3	2	1	154130336	1107
ENSMUSG00000093954	protein_coding	Gm16867	ENSMUST00000180059	protein_coding		14	-1	69503232	342
ENSMUSG00000027777	protein_coding	Schip1	ENSMUST00000182997	protein_coding	alternative1	3	1	68584179	1557
ENSMUSG00000086207	antisense	Gm14717	ENSMUST00000140450	antisense		X	-1	76261392	649
ENSMUSG00000038932	protein_coding	Tcfl5	ENSMUST00000037877	protein_coding	principal1	2	-1	180642708	2225
ENSMUSG00000027482	protein_coding	Bpifa3	ENSMUST00000109746	protein_coding	alternative2	2	1	154130336	1102
ENSMUSG00000025887	protein_coding	Casp12	ENSMUST00000149520	retained_intron		9	1	5345479	1306
ENSMUSG00000027777	protein_coding	Schip1	ENSMUST00000182360	retained_intron		3	1	68596175	1989
ENSMUSG00000025887	protein_coding	Casp12	ENSMUST00000138308	retained_intron		9	1	5345496	1504
ENSMUSG00000038932	protein_coding	Tcfl5	ENSMUST00000161425	nonsense_mediated_decay		2	-1	180642589	1163
ENSMUSG00000027482	protein_coding	Bpifa3	ENSMUST00000125753	nonsense_mediated_decay		2	1	154135544	443
ENSMUSG00000025887	protein_coding	Casp12	ENSMUST00000151332	protein_coding		9	1	5345504	1065
ENSMUSG00000103345	TEC	Gm10723	ENSMUST00000195366	TEC		3	1	68407783	6918
ENSMUSG00000038932	protein_coding	Tcfl5	ENSMUST00000131881	retained_intron		2	-1	180642347	1904
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000177352	protein_coding	alternative1	15	-1	97767062	3395
ENSMUSG00000094526	unprocessed_pseudogene	Gm21451	ENSMUST00000111062	unprocessed_pseudogene		14	1	69390854	2775
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000134885	protein_coding		15	-1	97767666	1422
ENSMUSG00000042097	protein_coding	Zfp239	ENSMUST00000134619	processed_transcript		6	1	117863077	786
ENSMUSG00000098270	antisense	Gm27221	ENSMUST00000183485	antisense		14	-1	69352259	961
ENSMUSG00000042097	protein_coding	Zfp239	ENSMUST00000079405	protein_coding	principal1	6	1	117863077	3158
ENSMUSG00000051777	protein_coding	Iqcj	ENSMUST00000063263	protein_coding	principal1	3	1	67892220	1579
ENSMUSG00000028008	protein_coding	Asic5	ENSMUST00000142889	processed_transcript		3	1	81982290	716
ENSMUSG00000042097	protein_coding	Zfp239	ENSMUST00000150936	retained_intron		6	1	117863084	1128
ENSMUSG00000098773	protein_coding	Gm27179	ENSMUST00000184652	protein_coding	principal1	14	-1	69512549	3017
ENSMUSG00000102846	processed_pseudogene	Gm10292	ENSMUST00000193165	processed_pseudogene		3	1	68333196	585
ENSMUSG00000042097	protein_coding	Zfp239	ENSMUST00000141657	processed_transcript		6	1	117863084	915
ENSMUSG00000042097	protein_coding	Zfp239	ENSMUST00000112857	processed_transcript		6	1	117863084	538
ENSMUSG00000042097	protein_coding	Zfp239	ENSMUST00000172088	protein_coding	principal1	6	1	117863077	2812
ENSMUSG00000102422	protein_coding	Iqschfp	ENSMUST00000182006	protein_coding	principal1	3	1	67892232	2369
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000175894	nonsense_mediated_decay		15	-1	97767420	2612
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000125002	retained_intron		15	-1	97748872	781
ENSMUSG00000111685	TEC	Gm10686	ENSMUST00000215389	TEC		9	1	44255047	3247
ENSMUSG00000027201	protein_coding	Myef2	ENSMUST00000129945	processed_transcript		2	-1	125089011	3424
ENSMUSG00000031780	protein_coding	Ccl17	ENSMUST00000034232	protein_coding	principal1	8	1	94810453	514
ENSMUSG00000028671	protein_coding	Gale	ENSMUST00000102541	protein_coding	principal1	4	1	135963727	1430
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000123397	retained_intron		15	-1	97767587	4204
ENSMUSG00000053641	protein_coding	Dennd4a	ENSMUST00000038890	protein_coding	principal1	9	1	64811340	8645
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000112155	protein_coding	principal1	9	1	108517110	3040
ENSMUSG00000028671	protein_coding	Gale	ENSMUST00000149636	protein_coding		4	1	135963757	327
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000155810	retained_intron		15	-1	97750705	654
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000146214	retained_intron		15	-1	97757502	729
ENSMUSG00000053641	protein_coding	Dennd4a	ENSMUST00000213926	protein_coding		9	1	64811432	643
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000134371	nonsense_mediated_decay		15	-1	97758503	390
ENSMUSG00000028671	protein_coding	Gale	ENSMUST00000128929	retained_intron		4	1	135963760	885
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000153241	processed_transcript		15	-1	97760425	371
ENSMUSG00000028671	protein_coding	Gale	ENSMUST00000143304	protein_coding		4	1	135963817	457
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000149419	nonsense_mediated_decay		15	-1	97767046	856
ENSMUSG00000028008	protein_coding	Asic5	ENSMUST00000029641	protein_coding	principal2	3	1	81996922	1657
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000153464	processed_transcript		15	-1	97761879	619
ENSMUSG00000053641	protein_coding	Dennd4a	ENSMUST00000215025	retained_intron		9	1	64811432	2204
ENSMUSG00000028671	protein_coding	Gale	ENSMUST00000102540	protein_coding	principal1	4	1	135965165	1537
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000006851	protein_coding	principal1	9	1	108517114	3331
ENSMUSG00000053641	protein_coding	Dennd4a	ENSMUST00000214001	retained_intron		9	1	64811460	2491
ENSMUSG00000028008	protein_coding	Asic5	ENSMUST00000107736	protein_coding	alternative2	3	1	81999461	1706
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000146620	protein_coding		15	-1	97767264	661
ENSMUSG00000053641	protein_coding	Dennd4a	ENSMUST00000213437	processed_transcript		9	1	64811544	1928
ENSMUSG00000021477	protein_coding	Ctsl	ENSMUST00000222517	protein_coding	principal1	13	-1	64370890	6168
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000142196	retained_intron		15	-1	97761854	456
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000192932	protein_coding		9	1	108517152	432
ENSMUSG00000028671	protein_coding	Gale	ENSMUST00000153542	retained_intron		4	1	135965195	892
ENSMUSG00000086633	lincRNA	Gm16081	ENSMUST00000155992	lincRNA		1	-1	130281258	684
ENSMUSG00000053641	protein_coding	Dennd4a	ENSMUST00000216098	retained_intron		9	1	64888960	5418
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000193348	protein_coding		9	1	108517155	533
ENSMUSG00000022469	protein_coding	Rapgef3	ENSMUST00000135080	protein_coding		15	-1	97767972	392
ENSMUSG00000028671	protein_coding	Gale	ENSMUST00000150430	retained_intron		4	1	135965619	930
ENSMUSG00000053641	protein_coding	Dennd4a	ENSMUST00000214029	retained_intron		9	1	64907197	942
ENSMUSG00000021477	protein_coding	Ctsl	ENSMUST00000222971	protein_coding		13	-1	64367055	582
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000194385	protein_coding		9	1	108517156	975
ENSMUSG00000114358	processed_pseudogene	Gm5200	ENSMUST00000223786	processed_pseudogene		13	-1	117459075	1240
ENSMUSG00000053641	protein_coding	Dennd4a	ENSMUST00000213744	retained_intron		9	1	64912236	2792
ENSMUSG00000053641	protein_coding	Dennd4a	ENSMUST00000217307	processed_transcript		9	1	64912483	426
ENSMUSG00000114184	processed_pseudogene	Gm7143	ENSMUST00000222811	processed_pseudogene		12	-1	102867489	859
ENSMUSG00000027570	protein_coding	Col9a3	ENSMUST00000132527	protein_coding	principal1	2	1	180597790	3046
ENSMUSG00000113067	TEC	Gm47166	ENSMUST00000221978	TEC		12	-1	102861449	1709
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000194743	retained_intron		9	1	108517599	3267
ENSMUSG00000113907	antisense	Gm47167	ENSMUST00000220987	antisense		12	1	102838108	534
ENSMUSG00000073967	protein_coding	Olfr557	ENSMUST00000215423	protein_coding	principal1	7	1	102695910	2680
ENSMUSG00000021477	protein_coding	Ctsl	ENSMUST00000222462	protein_coding		13	-1	64370306	698
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000192819	protein_coding		9	1	108517623	721
ENSMUSG00000027968	protein_coding	Larp7	ENSMUST00000029588	protein_coding	principal1	3	-1	127553349	2121
ENSMUSG00000073967	protein_coding	Olfr557	ENSMUST00000098218	protein_coding	principal1	7	1	102698216	1057
ENSMUSG00000021477	protein_coding	Ctsl	ENSMUST00000223494	nonsense_mediated_decay		13	-1	64370306	644
ENSMUSG00000044819	protein_coding	Oxgr1	ENSMUST00000058213	protein_coding	principal1	14	-1	120042435	3732
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000194741	protein_coding		9	1	108528412	565
ENSMUSG00000027332	protein_coding	Ivd	ENSMUST00000028807	protein_coding	principal1	2	1	118861954	3665
ENSMUSG00000021477	protein_coding	Ctsl	ENSMUST00000220737	protein_coding		13	-1	64370753	834
ENSMUSG00000027570	protein_coding	Col9a3	ENSMUST00000141056	retained_intron		2	1	180598806	609
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000194139	retained_intron		9	1	108556218	756
ENSMUSG00000021477	protein_coding	Ctsl	ENSMUST00000220617	retained_intron		13	-1	64370306	364
ENSMUSG00000027332	protein_coding	Ivd	ENSMUST00000126082	retained_intron		2	1	118862028	897
ENSMUSG00000027968	protein_coding	Larp7	ENSMUST00000195976	retained_intron		3	-1	127547537	1391
ENSMUSG00000006673	protein_coding	Qrich1	ENSMUST00000194387	retained_intron		9	1	108556556	647
ENSMUSG00000046971	protein_coding	Pla2g4f	ENSMUST00000142183	retained_intron		2	-1	120312377	2610
ENSMUSG00000027332	protein_coding	Ivd	ENSMUST00000141836	processed_transcript		2	1	118871378	266
ENSMUSG00000115133	processed_pseudogene	Gm20167	ENSMUST00000226914	processed_pseudogene		14	1	120077510	150
ENSMUSG00000027968	protein_coding	Larp7	ENSMUST00000197698	retained_intron		3	-1	127553197	733
ENSMUSG00000021477	protein_coding	Ctsl	ENSMUST00000021933	protein_coding	principal1	13	-1	64370306	1971
ENSMUSG00000103970	TEC	Gm37678	ENSMUST00000192908	TEC		9	1	108544214	1146
ENSMUSG00000027968	protein_coding	Larp7	ENSMUST00000197668	protein_coding		3	-1	127553347	411
ENSMUSG00000103621	TEC	Gm38366	ENSMUST00000193127	TEC		9	1	108530832	1934
ENSMUSG00000057530	protein_coding	Ece1	ENSMUST00000102518	protein_coding	principal1	4	1	137862237	4816
ENSMUSG00000057530	protein_coding	Ece1	ENSMUST00000130407	protein_coding		4	1	137862297	172
ENSMUSG00000027570	protein_coding	Col9a3	ENSMUST00000129090	retained_intron		2	1	180603185	1552
ENSMUSG00000057530	protein_coding	Ece1	ENSMUST00000151110	protein_coding		4	1	137913471	728
ENSMUSG00000027332	protein_coding	Ivd	ENSMUST00000150162	processed_transcript		2	1	118872303	606
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000025921	protein_coding	alternative1	19	-1	7295447	3018
ENSMUSG00000027570	protein_coding	Col9a3	ENSMUST00000165879	retained_intron		2	1	180614113	644
ENSMUSG00000047129	protein_coding	1700113H08Rik	ENSMUST00000189456	protein_coding		10	1	87058045	974
ENSMUSG00000115146	lincRNA	Gm4681	ENSMUST00000226227	lincRNA		14	-1	120195452	1329
ENSMUSG00000057530	protein_coding	Ece1	ENSMUST00000129607	processed_transcript		4	1	137913682	321
ENSMUSG00000027332	protein_coding	Ivd	ENSMUST00000140282	retained_intron		2	1	118872767	446
ENSMUSG00000027570	protein_coding	Col9a3	ENSMUST00000165224	retained_intron		2	1	180616266	749
ENSMUSG00000115146	lincRNA	Gm4681	ENSMUST00000226598	lincRNA		14	-1	120141629	710
ENSMUSG00000071738	protein_coding	Cldn34b3	ENSMUST00000096389	protein_coding	principal1	X	1	76264304	1077
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000171721	protein_coding		19	-1	7341192	2660
ENSMUSG00000047129	protein_coding	1700113H08Rik	ENSMUST00000169849	protein_coding	principal1	10	1	87058046	1332
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000165965	protein_coding	principal4	19	-1	7341433	2874
ENSMUSG00000027570	protein_coding	Col9a3	ENSMUST00000103059	protein_coding	principal1	2	1	180598222	2846
ENSMUSG00000098085	processed_pseudogene	Gm8919	ENSMUST00000182028	processed_pseudogene		3	-1	11659510	1014
ENSMUSG00000081061	processed_pseudogene	Gm14712	ENSMUST00000120195	processed_pseudogene		X	-1	76301954	772
ENSMUSG00000114983	lincRNA	Gm48997	ENSMUST00000227459	lincRNA		14	-1	120130603	257
ENSMUSG00000027332	protein_coding	Ivd	ENSMUST00000125766	processed_transcript		2	1	118874307	936
ENSMUSG00000047129	protein_coding	1700113H08Rik	ENSMUST00000189775	protein_coding		10	1	87205979	798
ENSMUSG00000085226	processed_pseudogene	Gm7855	ENSMUST00000137737	processed_pseudogene		X	-1	134625744	687
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000166461	protein_coding		19	-1	7283050	1165
ENSMUSG00000027332	protein_coding	Ivd	ENSMUST00000152191	processed_transcript		2	1	118875707	1010
ENSMUSG00000104015	lincRNA	Gm10745	ENSMUST00000192022	lincRNA		3	-1	11844359	1523
ENSMUSG00000027332	protein_coding	Ivd	ENSMUST00000154104	processed_transcript		2	1	118876433	668
ENSMUSG00000082655	processed_pseudogene	Gm7857	ENSMUST00000117957	processed_pseudogene		X	1	134681520	358
ENSMUSG00000050222	protein_coding	Il17d	ENSMUST00000089494	protein_coding	principal1	14	1	57524777	1274
ENSMUSG00000070995	lincRNA	Gm6313	ENSMUST00000150112	lincRNA		6	-1	148614309	2562
ENSMUSG00000070995	lincRNA	Gm6313	ENSMUST00000024796	lincRNA		6	-1	148609733	2494
ENSMUSG00000061184	protein_coding	Tmprss11c	ENSMUST00000059424	protein_coding	principal2	5	-1	86289308	1615
ENSMUSG00000103339	processed_pseudogene	Gm37996	ENSMUST00000191859	processed_pseudogene		3	-1	12384609	367
ENSMUSG00000083333	unprocessed_pseudogene	Magea7-ps	ENSMUST00000117727	unprocessed_pseudogene		X	1	76347394	960
ENSMUSG00000061184	protein_coding	Tmprss11c	ENSMUST00000196462	protein_coding	alternative2	5	-1	86289260	1257
ENSMUSG00000051313	protein_coding	Olfr1262	ENSMUST00000111508	protein_coding	principal1	2	1	90000145	6068
ENSMUSG00000082444	processed_pseudogene	Gm14709	ENSMUST00000121225	processed_pseudogene		X	1	76356827	304
ENSMUSG00000034452	protein_coding	Slc24a1	ENSMUST00000037798	protein_coding	principal1	9	-1	64951607	5213
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000165286	protein_coding		19	-1	7341804	2975
ENSMUSG00000104177	processed_pseudogene	Gm2429	ENSMUST00000194635	processed_pseudogene		3	1	12631260	586
ENSMUSG00000051313	protein_coding	Olfr1262	ENSMUST00000131072	protein_coding		2	1	90000170	636
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000171044	retained_intron		19	-1	7278094	652
ENSMUSG00000084909	lincRNA	4930528G23Rik	ENSMUST00000124575	lincRNA		6	-1	148678000	1723
ENSMUSG00000051313	protein_coding	Olfr1262	ENSMUST00000213868	protein_coding		2	1	90000562	658
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000168872	protein_coding		19	-1	7341221	2124
ENSMUSG00000073085	protein_coding	Cldn34b4	ENSMUST00000101419	protein_coding	principal1	X	1	76393350	1103
ENSMUSG00000034275	protein_coding	Igsf9b	ENSMUST00000214357	protein_coding	principal1	9	1	27299204	16144
ENSMUSG00000081556	processed_pseudogene	Gm15778	ENSMUST00000118469	processed_pseudogene		6	-1	148699636	608
ENSMUSG00000051313	protein_coding	Olfr1262	ENSMUST00000061701	protein_coding	principal1	2	1	90002347	1024
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000167767	protein_coding		19	-1	7283065	800
ENSMUSG00000073085	protein_coding	Cldn34b4	ENSMUST00000178974	protein_coding	principal1	X	1	76393452	881
ENSMUSG00000095661	transcribed_processed_pseudogene	Gm8935	ENSMUST00000066794	processed_transcript		3	1	12855836	2798
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000165881	protein_coding		19	-1	7283178	910
ENSMUSG00000095661	transcribed_processed_pseudogene	Gm8935	ENSMUST00000105727	transcribed_processed_pseudogene		3	1	12856020	1959
ENSMUSG00000046971	protein_coding	Pla2g4f	ENSMUST00000054651	protein_coding	principal1	2	-1	120314165	3116
ENSMUSG00000081175	unprocessed_pseudogene	Gm5793	ENSMUST00000119393	unprocessed_pseudogene		X	-1	76539538	630
ENSMUSG00000107405	lincRNA	Gm44115	ENSMUST00000203917	lincRNA		6	1	148701998	2069
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000171352	protein_coding		19	-1	7283517	3107
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000163345	protein_coding		19	-1	7281941	521
ENSMUSG00000030981	protein_coding	Mmp21	ENSMUST00000033278	protein_coding	principal1	7	-1	133680061	1858
ENSMUSG00000079525	protein_coding	Cldn34d	ENSMUST00000114054	protein_coding	principal1	X	-1	76602924	1003
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000164129	nonsense_mediated_decay		19	-1	7283110	552
ENSMUSG00000030981	protein_coding	Mmp21	ENSMUST00000131894	retained_intron		7	-1	133680061	2665
ENSMUSG00000034275	protein_coding	Igsf9b	ENSMUST00000115247	protein_coding		9	1	27299228	2857
ENSMUSG00000030981	protein_coding	Mmp21	ENSMUST00000122136	protein_coding		7	-1	133680061	1599
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000170768	retained_intron		19	-1	7284778	516
ENSMUSG00000034275	protein_coding	Igsf9b	ENSMUST00000214187	retained_intron		9	1	27326940	2288
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000168852	retained_intron		19	-1	7287363	851
ENSMUSG00000034275	protein_coding	Igsf9b	ENSMUST00000133213	protein_coding		9	1	27299228	4239
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000171393	protein_coding		19	-1	7341860	720
ENSMUSG00000081271	processed_pseudogene	Gm14883	ENSMUST00000120179	processed_pseudogene		X	1	18343798	157
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000169541	protein_coding		19	-1	7341604	592
ENSMUSG00000034795	protein_coding	Ccdc122	ENSMUST00000048208	protein_coding	principal3	14	1	77036772	1721
ENSMUSG00000041702	protein_coding	Btbd7	ENSMUST00000223554	protein_coding	principal1	12	-1	102878406	8157
ENSMUSG00000110920	processed_pseudogene	Gm48858	ENSMUST00000215351	processed_pseudogene		9	1	27386267	351
ENSMUSG00000034795	protein_coding	Ccdc122	ENSMUST00000095625	protein_coding	alternative2	14	1	77036782	1195
ENSMUSG00000041702	protein_coding	Btbd7	ENSMUST00000045652	protein_coding	principal1	12	-1	102878278	4035
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000165989	protein_coding		19	-1	7341642	444
ENSMUSG00000021951	protein_coding	Eef1akmt1	ENSMUST00000239099	protein_coding	principal1	14	-1	57571612	880
ENSMUSG00000034795	protein_coding	Ccdc122	ENSMUST00000175810	nonsense_mediated_decay		14	1	77036864	1162
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000168324	protein_coding		19	-1	7341812	339
ENSMUSG00000041702	protein_coding	Btbd7	ENSMUST00000220596	retained_intron		12	-1	102840281	6886
ENSMUSG00000021951	protein_coding	Eef1akmt1	ENSMUST00000225504	processed_transcript		14	-1	57569929	457
ENSMUSG00000024969	protein_coding	Mark2	ENSMUST00000051711	protein_coding	principal4	19	-1	7341588	2867
ENSMUSG00000034795	protein_coding	Ccdc122	ENSMUST00000137110	processed_transcript		14	1	77110975	1020
ENSMUSG00000041702	protein_coding	Btbd7	ENSMUST00000221925	retained_intron		12	-1	102878408	2372
ENSMUSG00000041702	protein_coding	Btbd7	ENSMUST00000221376	retained_intron		12	-1	102878471	3509
ENSMUSG00000045038	protein_coding	Prkce	ENSMUST00000097275	protein_coding	principal1	17	1	86167785	6254
ENSMUSG00000025467	protein_coding	Prap1	ENSMUST00000026540	protein_coding	principal1	7	1	140093395	620
ENSMUSG00000091558	antisense	Gm17227	ENSMUST00000170286	antisense		19	1	7297658	1016
ENSMUSG00000041702	protein_coding	Btbd7	ENSMUST00000221914	processed_transcript		12	-1	102878269	423
ENSMUSG00000021951	protein_coding	Eef1akmt1	ENSMUST00000022518	protein_coding		14	-1	57571569	836
ENSMUSG00000091558	antisense	Gm17227	ENSMUST00000166590	antisense		19	1	7297734	585
ENSMUSG00000078598	protein_coding	Skint5	ENSMUST00000169631	protein_coding	principal5	4	-1	113999503	4497
ENSMUSG00000045038	protein_coding	Prkce	ENSMUST00000142003	nonsense_mediated_decay		17	1	86167819	1594
ENSMUSG00000082824	processed_pseudogene	Gm14716	ENSMUST00000120138	processed_pseudogene		X	1	76631434	718
ENSMUSG00000037358	protein_coding	Dipk2b	ENSMUST00000044188	protein_coding	principal1	X	-1	18461371	1896
ENSMUSG00000078598	protein_coding	Skint5	ENSMUST00000170105	protein_coding	alternative2	4	-1	113999503	4434
ENSMUSG00000045038	protein_coding	Prkce	ENSMUST00000097274	protein_coding	principal1	17	1	86168174	3161
ENSMUSG00000112876	lincRNA	Gm32443	ENSMUST00000220011	lincRNA		12	-1	31089470	773
ENSMUSG00000112876	lincRNA	Gm32443	ENSMUST00000217880	lincRNA		12	-1	31090561	707
ENSMUSG00000083810	processed_pseudogene	Gm14713	ENSMUST00000122362	processed_pseudogene		X	1	76737639	686
ENSMUSG00000045038	protein_coding	Prkce	ENSMUST00000150486	retained_intron		17	1	86490562	661
ENSMUSG00000078598	protein_coding	Skint5	ENSMUST00000153413	retained_intron		4	-1	113999503	851
ENSMUSG00000037358	protein_coding	Dipk2b	ENSMUST00000147039	processed_transcript		X	-1	18461397	3499
ENSMUSG00000112799	processed_pseudogene	Gm48100	ENSMUST00000219793	processed_pseudogene		12	-1	31100646	1026
ENSMUSG00000045038	protein_coding	Prkce	ENSMUST00000136986	retained_intron		17	1	86493327	614
ENSMUSG00000097933	bidirectional_promoter_lncRNA	1700039M10Rik	ENSMUST00000180397	bidirectional_promoter_lncRNA		14	1	57571614	532
ENSMUSG00000078598	protein_coding	Skint5	ENSMUST00000171627	protein_coding		4	-1	113999503	1611
ENSMUSG00000100738	antisense	2010106C02Rik	ENSMUST00000191222	antisense		17	-1	86287178	660
ENSMUSG00000083482	processed_pseudogene	Gm14706	ENSMUST00000117744	processed_pseudogene		X	-1	76920110	255
ENSMUSG00000117546	TEC	AC154542.1	ENSMUST00000234087	TEC		17	1	86175575	2455
ENSMUSG00000044350	protein_coding	Lacc1	ENSMUST00000062789	protein_coding	principal1	14	-1	77036641	2444
ENSMUSG00000081697	processed_pseudogene	Gm14714	ENSMUST00000119743	processed_pseudogene		X	1	76980706	439
ENSMUSG00000043991	protein_coding	Pura	ENSMUST00000051301	protein_coding	principal1	18	1	36281097	5957
ENSMUSG00000084202	processed_pseudogene	Gm5398	ENSMUST00000121933	processed_pseudogene		X	-1	77290815	984
ENSMUSG00000044350	protein_coding	Lacc1	ENSMUST00000139809	retained_intron		14	-1	77036904	2391
ENSMUSG00000062867	protein_coding	Impdh2	ENSMUST00000081111	protein_coding	principal1	9	1	108560286	1858
ENSMUSG00000044350	protein_coding	Lacc1	ENSMUST00000142300	protein_coding		14	-1	77036081	726
ENSMUSG00000031330	protein_coding	Zcchc13	ENSMUST00000033692	protein_coding	principal1	X	1	103630586	1085
ENSMUSG00000082517	processed_pseudogene	Gm5757	ENSMUST00000117494	processed_pseudogene		X	1	77292661	528
ENSMUSG00000062867	protein_coding	Impdh2	ENSMUST00000193421	protein_coding		9	1	108560439	840
ENSMUSG00000110185	protein_coding	Igip	ENSMUST00000210490	protein_coding	principal1	18	1	36298679	2839
ENSMUSG00000062867	protein_coding	Impdh2	ENSMUST00000193535	retained_intron		9	1	108560470	715
ENSMUSG00000081622	processed_pseudogene	Gm5937	ENSMUST00000119715	processed_pseudogene		X	1	77456586	643
ENSMUSG00000087024	processed_transcript	B230119M05Rik	ENSMUST00000154072	processed_transcript		X	-1	134686462	979
ENSMUSG00000070563	protein_coding	Spaca4	ENSMUST00000094424	protein_coding	principal1	7	-1	45725813	707
ENSMUSG00000062867	protein_coding	Impdh2	ENSMUST00000194365	retained_intron		9	1	108560480	661
ENSMUSG00000027111	protein_coding	Itga6	ENSMUST00000112101	protein_coding	alternative1	2	1	71786940	4156
ENSMUSG00000083263	processed_pseudogene	Gm14874	ENSMUST00000118995	processed_pseudogene		X	-1	103644727	438
ENSMUSG00000062867	protein_coding	Impdh2	ENSMUST00000194904	protein_coding		9	1	108563135	961
ENSMUSG00000062867	protein_coding	Impdh2	ENSMUST00000195456	retained_intron		9	1	108563269	818
ENSMUSG00000062867	protein_coding	Impdh2	ENSMUST00000193493	retained_intron		9	1	108565200	289
ENSMUSG00000062867	protein_coding	Impdh2	ENSMUST00000194689	retained_intron		9	1	108565204	274
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000114354	protein_coding	alternative2	X	-1	74023918	3835
ENSMUSG00000054161	protein_coding	Fam83e	ENSMUST00000129507	protein_coding	principal1	7	1	45721212	2908
ENSMUSG00000027111	protein_coding	Itga6	ENSMUST00000028522	protein_coding	principal3	2	1	71786978	4310
ENSMUSG00000049804	protein_coding	Armcx4	ENSMUST00000124226	protein_coding	principal1	X	1	134686519	7996
ENSMUSG00000054161	protein_coding	Fam83e	ENSMUST00000210434	retained_intron		7	1	45721220	2609
ENSMUSG00000009356	protein_coding	Lpo	ENSMUST00000103177	protein_coding	principal1	11	-1	87826113	2926
ENSMUSG00000054161	protein_coding	Fam83e	ENSMUST00000211124	processed_transcript		7	1	45725859	1223
ENSMUSG00000027111	protein_coding	Itga6	ENSMUST00000238991	protein_coding		2	1	71787139	3393
ENSMUSG00000009356	protein_coding	Lpo	ENSMUST00000157004	retained_intron		11	-1	87817505	258
ENSMUSG00000027111	protein_coding	Itga6	ENSMUST00000155249	protein_coding		2	1	71826762	3313
ENSMUSG00000080696	unprocessed_pseudogene	Gm12825	ENSMUST00000120249	unprocessed_pseudogene		4	-1	114097401	563
ENSMUSG00000009356	protein_coding	Lpo	ENSMUST00000136446	protein_coding		11	-1	87828289	570
ENSMUSG00000027111	protein_coding	Itga6	ENSMUST00000155596	processed_transcript		2	1	71838081	685
ENSMUSG00000118515	processed_pseudogene	AL627257.1	ENSMUST00000238945	processed_pseudogene		4	1	114122039	1330
ENSMUSG00000027111	protein_coding	Itga6	ENSMUST00000126787	processed_transcript		2	1	71849029	2721
ENSMUSG00000070283	protein_coding	Ndufaf3	ENSMUST00000074208	protein_coding	principal1	9	-1	108567434	1487
ENSMUSG00000027111	protein_coding	Itga6	ENSMUST00000139760	processed_transcript		2	1	71849437	443
ENSMUSG00000070283	protein_coding	Ndufaf3	ENSMUST00000194381	protein_coding		9	-1	108566717	478
ENSMUSG00000086641	processed_transcript	Gm13663	ENSMUST00000145563	processed_transcript		2	1	71747507	643
ENSMUSG00000086641	processed_transcript	Gm13663	ENSMUST00000127600	processed_transcript		2	1	71748467	616
ENSMUSG00000070283	protein_coding	Ndufaf3	ENSMUST00000193242	retained_intron		9	-1	108566910	852
ENSMUSG00000070283	protein_coding	Ndufaf3	ENSMUST00000194666	retained_intron		9	-1	108566930	525
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000028607	protein_coding	principal1	2	-1	103797649	6169
ENSMUSG00000081878	processed_pseudogene	Gm13739	ENSMUST00000118020	processed_pseudogene		2	-1	71762767	530
ENSMUSG00000084794	processed_transcript	Gm13662	ENSMUST00000157059	processed_transcript		2	1	71749925	712
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000111147	protein_coding	principal1	2	-1	103797104	4069
ENSMUSG00000114631	processed_pseudogene	Gm5199	ENSMUST00000223855	processed_pseudogene		13	1	92719362	466
ENSMUSG00000103103	lincRNA	4833445I07Rik	ENSMUST00000193193	lincRNA		9	1	108567533	1642
ENSMUSG00000103103	lincRNA	4833445I07Rik	ENSMUST00000194104	lincRNA		9	1	108567893	579
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000143349	protein_coding		2	-1	103772781	1923
ENSMUSG00000005628	protein_coding	Tmod4	ENSMUST00000131597	protein_coding		3	1	95124476	765
ENSMUSG00000037443	protein_coding	Cep85	ENSMUST00000040271	protein_coding	principal2	4	-1	134187112	3893
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000145606	protein_coding		2	-1	103771793	856
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000149175	retained_intron		2	-1	103772684	816
ENSMUSG00000037443	protein_coding	Cep85	ENSMUST00000121566	protein_coding	alternative2	4	-1	134186981	3748
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000132537	retained_intron		2	-1	103774272	937
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000137572	processed_transcript		2	-1	103773712	809
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000143188	protein_coding		2	-1	103779368	760
ENSMUSG00000057977	protein_coding	Skint11	ENSMUST00000079915	protein_coding		4	1	114163384	820
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000137390	retained_intron		2	-1	103776008	570
ENSMUSG00000037443	protein_coding	Cep85	ENSMUST00000141384	processed_transcript		4	-1	134187085	1010
ENSMUSG00000057977	protein_coding	Skint11	ENSMUST00000145797	protein_coding		4	1	114163465	643
ENSMUSG00000037443	protein_coding	Cep85	ENSMUST00000137388	nonsense_mediated_decay		4	-1	134187085	769
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000128477	processed_transcript		2	-1	103775654	479
ENSMUSG00000030895	protein_coding	Hpx	ENSMUST00000033185	protein_coding	principal1	7	-1	105600137	1499
ENSMUSG00000057977	protein_coding	Skint11	ENSMUST00000151810	protein_coding		4	1	114163465	624
ENSMUSG00000037443	protein_coding	Cep85	ENSMUST00000132120	retained_intron		4	-1	134187051	308
ENSMUSG00000057977	protein_coding	Skint11	ENSMUST00000164297	protein_coding	principal1	4	1	114163384	1393
ENSMUSG00000030895	protein_coding	Hpx	ENSMUST00000210531	protein_coding		7	-1	105600112	592
ENSMUSG00000037443	protein_coding	Cep85	ENSMUST00000145531	processed_transcript		4	-1	134156921	582
ENSMUSG00000103722	TEC	2700078F05Rik	ENSMUST00000194331	TEC		1	-1	181953375	3244
ENSMUSG00000082825	processed_pseudogene	Gm15741	ENSMUST00000119401	processed_pseudogene		4	-1	114165876	754
ENSMUSG00000037443	protein_coding	Cep85	ENSMUST00000141992	retained_intron		4	-1	134154483	384
ENSMUSG00000037443	protein_coding	Cep85	ENSMUST00000126014	retained_intron		4	-1	134139277	828
ENSMUSG00000037443	protein_coding	Cep85	ENSMUST00000138144	processed_transcript		4	-1	134132642	620
ENSMUSG00000005628	protein_coding	Tmod4	ENSMUST00000005769	protein_coding	principal1	3	1	95124514	1242
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000141750	processed_transcript		2	-1	103796933	879
ENSMUSG00000081342	processed_pseudogene	Gm11434	ENSMUST00000122379	processed_pseudogene		11	1	83800464	629
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000145697	processed_transcript		2	-1	103796544	555
ENSMUSG00000005628	protein_coding	Tmod4	ENSMUST00000107227	protein_coding	principal1	3	1	95124515	1260
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000145770	retained_intron		2	-1	103796973	828
ENSMUSG00000081534	protein_coding	Slc48a1	ENSMUST00000230531	processed_transcript		15	1	97778520	702
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000155733	processed_transcript		2	-1	103796868	391
ENSMUSG00000027184	protein_coding	Caprin1	ENSMUST00000146527	retained_intron		2	-1	103797599	626
ENSMUSG00000081534	protein_coding	Slc48a1	ENSMUST00000117892	protein_coding	principal1	15	1	97784355	2536
ENSMUSG00000085235	lincRNA	Gm12576	ENSMUST00000135268	lincRNA		11	-1	83849493	3036
ENSMUSG00000081534	protein_coding	Slc48a1	ENSMUST00000135073	nonsense_mediated_decay		15	1	97784428	404
ENSMUSG00000030528	protein_coding	Blm	ENSMUST00000206901	protein_coding		7	-1	80463877	993
ENSMUSG00000115453	lincRNA	BC048602	ENSMUST00000226642	lincRNA		15	-1	35313085	526
ENSMUSG00000005628	protein_coding	Tmod4	ENSMUST00000130545	retained_intron		3	1	95126204	942
ENSMUSG00000081534	protein_coding	Slc48a1	ENSMUST00000229084	protein_coding		15	1	97784489	789
ENSMUSG00000005628	protein_coding	Tmod4	ENSMUST00000135867	processed_transcript		3	1	95127170	337
ENSMUSG00000115453	lincRNA	BC048602	ENSMUST00000226922	lincRNA		15	-1	35313147	482
ENSMUSG00000005628	protein_coding	Tmod4	ENSMUST00000149898	retained_intron		3	1	95127653	669
ENSMUSG00000115453	lincRNA	BC048602	ENSMUST00000227345	lincRNA		15	-1	35328535	731
ENSMUSG00000082757	processed_pseudogene	Gm6923	ENSMUST00000118343	processed_pseudogene		X	1	18920804	406
ENSMUSG00000045392	protein_coding	Olfr1033	ENSMUST00000213774	protein_coding		2	1	86020633	316
ENSMUSG00000040712	protein_coding	Camta2	ENSMUST00000145823	nonsense_mediated_decay		11	-1	70686389	4406
ENSMUSG00000045392	protein_coding	Olfr1033	ENSMUST00000214546	protein_coding	principal1	2	1	86020640	2257
ENSMUSG00000081654	processed_pseudogene	Gm5383	ENSMUST00000121177	processed_pseudogene		X	1	18942612	617
ENSMUSG00000045392	protein_coding	Olfr1033	ENSMUST00000215682	protein_coding	principal1	2	1	86020640	3625
ENSMUSG00000066357	protein_coding	Wdr6	ENSMUST00000068700	protein_coding	principal1	9	-1	108578739	4163
ENSMUSG00000073274	processed_transcript	Gm14636	ENSMUST00000143129	processed_transcript		X	-1	19167232	2279
ENSMUSG00000045392	protein_coding	Olfr1033	ENSMUST00000218397	protein_coding	principal1	2	1	86038547	3973
ENSMUSG00000073274	processed_transcript	Gm14636	ENSMUST00000150801	processed_transcript		X	-1	19167241	5060
ENSMUSG00000045392	protein_coding	Olfr1033	ENSMUST00000213865	protein_coding	principal1	2	1	86034765	3664
ENSMUSG00000101834	processed_pseudogene	Gm5829	ENSMUST00000191383	processed_pseudogene		1	-1	71710055	351
ENSMUSG00000028458	protein_coding	Tesk1	ENSMUST00000060864	protein_coding	principal1	4	1	43441939	3947
ENSMUSG00000032109	protein_coding	Nlrx1	ENSMUST00000034621	protein_coding	principal1	9	-1	44268491	3669
ENSMUSG00000022390	protein_coding	Zc3h7b	ENSMUST00000229044	retained_intron		15	1	81745057	4618
ENSMUSG00000028458	protein_coding	Tesk1	ENSMUST00000138981	nonsense_mediated_decay		4	1	43443321	2212
ENSMUSG00000028458	protein_coding	Tesk1	ENSMUST00000126350	retained_intron		4	1	43444575	485
ENSMUSG00000028458	protein_coding	Tesk1	ENSMUST00000137178	retained_intron		4	1	43444708	680
ENSMUSG00000028458	protein_coding	Tesk1	ENSMUST00000156810	retained_intron		4	1	43444950	672
ENSMUSG00000032109	protein_coding	Nlrx1	ENSMUST00000169651	protein_coding	principal1	9	-1	44268128	3621
ENSMUSG00000060519	protein_coding	Tor3a	ENSMUST00000156861	nonsense_mediated_decay		1	-1	156674325	3545
ENSMUSG00000032109	protein_coding	Nlrx1	ENSMUST00000168499	protein_coding	principal1	9	-1	44268599	3579
ENSMUSG00000021483	protein_coding	Cdk20	ENSMUST00000021939	protein_coding	principal1	13	1	64432314	4118
ENSMUSG00000032109	protein_coding	Nlrx1	ENSMUST00000213764	retained_intron		9	-1	44268187	3549
ENSMUSG00000032109	protein_coding	Nlrx1	ENSMUST00000217465	protein_coding		9	-1	44266531	678
ENSMUSG00000021483	protein_coding	Cdk20	ENSMUST00000223011	retained_intron		13	1	64432355	2129
ENSMUSG00000021483	protein_coding	Cdk20	ENSMUST00000223121	nonsense_mediated_decay		13	1	64432542	2761
ENSMUSG00000032109	protein_coding	Nlrx1	ENSMUST00000213803	protein_coding		9	-1	44268235	775
ENSMUSG00000022390	protein_coding	Zc3h7b	ENSMUST00000109554	protein_coding	principal1	15	1	81745057	5740
ENSMUSG00000021483	protein_coding	Cdk20	ENSMUST00000220992	retained_intron		13	1	64432578	4020
ENSMUSG00000078601	lincRNA	Gm12525	ENSMUST00000125412	lincRNA		3	1	108361551	554
ENSMUSG00000021483	protein_coding	Cdk20	ENSMUST00000222576	nonsense_mediated_decay		13	1	64432624	797
ENSMUSG00000022390	protein_coding	Zc3h7b	ENSMUST00000230946	protein_coding		15	1	81745121	686
ENSMUSG00000021483	protein_coding	Cdk20	ENSMUST00000222562	nonsense_mediated_decay		13	1	64432980	1107
ENSMUSG00000022390	protein_coding	Zc3h7b	ENSMUST00000230368	retained_intron		15	1	81745171	4732
ENSMUSG00000022390	protein_coding	Zc3h7b	ENSMUST00000231108	retained_intron		15	1	81775779	2919
ENSMUSG00000022390	protein_coding	Zc3h7b	ENSMUST00000230590	processed_transcript		15	1	81778667	160
ENSMUSG00000021483	protein_coding	Cdk20	ENSMUST00000222470	nonsense_mediated_decay		13	1	64436281	826
ENSMUSG00000021483	protein_coding	Cdk20	ENSMUST00000223419	nonsense_mediated_decay		13	1	64436647	734
ENSMUSG00000021483	protein_coding	Cdk20	ENSMUST00000223279	retained_intron		13	1	64436894	711
ENSMUSG00000113696	antisense	1700015C15Rik	ENSMUST00000221465	antisense		13	-1	64432402	374
ENSMUSG00000022871	protein_coding	Fetub	ENSMUST00000231768	protein_coding	principal1	16	1	22918334	1572
ENSMUSG00000019039	protein_coding	Dalrd3	ENSMUST00000019183	protein_coding	principal1	9	1	108569886	1746
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000114352	protein_coding	principal3	X	-1	74023915	3825
ENSMUSG00000022871	protein_coding	Fetub	ENSMUST00000170805	protein_coding	principal1	16	1	22918382	1520
ENSMUSG00000019039	protein_coding	Dalrd3	ENSMUST00000195249	nonsense_mediated_decay		9	1	108569910	948
ENSMUSG00000027483	protein_coding	Bpifa1	ENSMUST00000028985	protein_coding	principal1	2	1	154142880	1106
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000021278	protein_coding	alternative2	11	1	69015911	4164
ENSMUSG00000019039	protein_coding	Dalrd3	ENSMUST00000193044	retained_intron		9	1	108569914	655
ENSMUSG00000027483	protein_coding	Bpifa1	ENSMUST00000144665	processed_transcript		2	1	154142899	765
ENSMUSG00000019039	protein_coding	Dalrd3	ENSMUST00000192651	retained_intron		9	1	108570696	1029
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000068286	protein_coding	principal3	X	-1	74023915	2537
ENSMUSG00000027483	protein_coding	Bpifa1	ENSMUST00000140006	processed_transcript		2	1	154144303	559
ENSMUSG00000022871	protein_coding	Fetub	ENSMUST00000231880	protein_coding		16	1	22918499	798
ENSMUSG00000019039	protein_coding	Dalrd3	ENSMUST00000193846	retained_intron		9	1	108571007	727
ENSMUSG00000031979	protein_coding	Cog2	ENSMUST00000034460	protein_coding	principal1	8	1	124520767	2825
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000135611	retained_intron		11	1	69015926	3035
ENSMUSG00000019039	protein_coding	Dalrd3	ENSMUST00000191897	retained_intron		9	1	108571237	1153
ENSMUSG00000031979	protein_coding	Cog2	ENSMUST00000176159	nonsense_mediated_decay		8	1	124520804	453
ENSMUSG00000019039	protein_coding	Dalrd3	ENSMUST00000193427	protein_coding		9	1	108571512	580
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000114360	protein_coding	alternative2	X	-1	74023915	2441
ENSMUSG00000019039	protein_coding	Dalrd3	ENSMUST00000191881	retained_intron		9	1	108572267	410
ENSMUSG00000059114	protein_coding	Lrrc74a	ENSMUST00000223308	protein_coding	alternative2	12	1	86734369	1854
ENSMUSG00000019039	protein_coding	Dalrd3	ENSMUST00000192518	protein_coding		9	1	108572392	201
ENSMUSG00000022871	protein_coding	Fetub	ENSMUST00000023587	protein_coding	principal1	16	1	22920237	1544
ENSMUSG00000069539	protein_coding	Scyl2	ENSMUST00000174252	protein_coding	principal3	10	-1	89686285	4817
ENSMUSG00000027201	protein_coding	Myef2	ENSMUST00000110501	nonsense_mediated_decay		2	-1	125123595	2333
ENSMUSG00000031979	protein_coding	Cog2	ENSMUST00000108803	retained_intron		8	1	124520805	2101
ENSMUSG00000022871	protein_coding	Fetub	ENSMUST00000232097	protein_coding	principal1	16	1	22920316	1597
ENSMUSG00000059114	protein_coding	Lrrc74a	ENSMUST00000222180	nonsense_mediated_decay		12	1	86734428	1845
ENSMUSG00000031979	protein_coding	Cog2	ENSMUST00000176279	nonsense_mediated_decay		8	1	124520819	446
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000120034	protein_coding		7	-1	140102403	680
ENSMUSG00000022871	protein_coding	Fetub	ENSMUST00000116625	protein_coding		16	1	22920452	1094
ENSMUSG00000031979	protein_coding	Cog2	ENSMUST00000129977	retained_intron		8	1	124535209	2087
ENSMUSG00000059114	protein_coding	Lrrc74a	ENSMUST00000223197	nonsense_mediated_decay		12	1	86741007	567
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000148716	nonsense_mediated_decay		7	-1	140102406	1685
ENSMUSG00000022871	protein_coding	Fetub	ENSMUST00000167399	protein_coding	principal1	16	1	22921745	1421
ENSMUSG00000069539	protein_coding	Scyl2	ENSMUST00000105294	processed_transcript		10	-1	89654471	2455
ENSMUSG00000100319	processed_pseudogene	Gm5256	ENSMUST00000191412	processed_pseudogene		1	-1	71714924	877
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000142105	protein_coding		7	-1	140102376	536
ENSMUSG00000059114	protein_coding	Lrrc74a	ENSMUST00000095527	protein_coding	principal2	12	1	86734383	1935
ENSMUSG00000069539	protein_coding	Scyl2	ENSMUST00000092227	protein_coding	alternative1	10	-1	89686268	3566
ENSMUSG00000027201	protein_coding	Myef2	ENSMUST00000152367	protein_coding	principal4	2	-1	125123626	2071
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000161455	protein_coding	alternative2	11	1	69015954	3989
ENSMUSG00000102689	TEC	Gm37217	ENSMUST00000194017	TEC		1	-1	71846610	3521
ENSMUSG00000069539	protein_coding	Scyl2	ENSMUST00000173526	retained_intron		10	-1	89654175	651
ENSMUSG00000027201	protein_coding	Myef2	ENSMUST00000142718	protein_coding	alternative2	2	-1	125123623	2942
ENSMUSG00000069539	protein_coding	Scyl2	ENSMUST00000174492	protein_coding		10	-1	89660161	895
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000026539	protein_coding	principal1	7	-1	140102441	685
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000148706	retained_intron		X	-1	74023826	2812
ENSMUSG00000069539	protein_coding	Scyl2	ENSMUST00000174575	retained_intron		10	-1	89686268	2814
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000132582	retained_intron		7	-1	140099968	401
ENSMUSG00000069539	protein_coding	Scyl2	ENSMUST00000174429	retained_intron		10	-1	89686263	3065
ENSMUSG00000030528	protein_coding	Blm	ENSMUST00000081314	protein_coding	principal3	7	-1	80535119	4598
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000143197	processed_transcript		7	-1	140102320	451
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000149871	retained_intron		X	-1	74023826	2846
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000133834	retained_intron		7	-1	140101244	518
ENSMUSG00000103950	processed_pseudogene	Gm8939	ENSMUST00000192577	processed_pseudogene		3	-1	12893414	964
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000211677	nonsense_mediated_decay		7	-1	140102375	360
ENSMUSG00000102770	sense_intronic	Gm38163	ENSMUST00000194112	sense_intronic		9	-1	108585361	482
ENSMUSG00000083418	transcribed_unprocessed_pseudogene	Olfr1035-ps1	ENSMUST00000213364	processed_transcript		2	-1	86057882	288
ENSMUSG00000070423	protein_coding	Olfr558	ENSMUST00000094124	protein_coding	principal1	7	1	102702215	3041
ENSMUSG00000103735	processed_pseudogene	Gm38317	ENSMUST00000195564	processed_pseudogene		3	1	12975359	343
ENSMUSG00000030528	protein_coding	Blm	ENSMUST00000170315	protein_coding	alternative2	7	-1	80534998	4770
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000128527	protein_coding		7	-1	140102344	549
ENSMUSG00000115688	unitary_pseudogene	Gm49209	ENSMUST00000227071	unitary_pseudogene		9	1	108587052	670
ENSMUSG00000083418	transcribed_unprocessed_pseudogene	Olfr1035-ps1	ENSMUST00000120109	transcribed_unprocessed_pseudogene		2	-1	86056964	966
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000121115	protein_coding		7	-1	140102406	872
ENSMUSG00000102815	TEC	Gm37813	ENSMUST00000195003	TEC		3	1	13288197	3695
ENSMUSG00000110376	unprocessed_pseudogene	Gm45688	ENSMUST00000210002	unprocessed_pseudogene		7	-1	102711479	101
ENSMUSG00000070867	protein_coding	Trabd2b	ENSMUST00000094894	protein_coding	principal1	4	1	114406724	6617
ENSMUSG00000030528	protein_coding	Blm	ENSMUST00000206518	processed_transcript		7	-1	80457372	540
ENSMUSG00000102091	protein_coding	Olfr1034	ENSMUST00000213496	protein_coding	principal1	2	1	86045861	4882
ENSMUSG00000030528	protein_coding	Blm	ENSMUST00000206948	retained_intron		7	-1	80459253	485
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000147713	processed_transcript		7	-1	140102306	452
ENSMUSG00000104065	processed_pseudogene	Gm37197	ENSMUST00000195607	processed_pseudogene		3	1	13429558	401
ENSMUSG00000030528	protein_coding	Blm	ENSMUST00000206989	nonsense_mediated_decay		7	-1	80460824	383
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000125421	processed_transcript		7	-1	140101966	346
ENSMUSG00000027201	protein_coding	Myef2	ENSMUST00000147105	protein_coding	alternative2	2	-1	125123661	2928
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000155777	retained_intron		7	-1	140102406	408
ENSMUSG00000030528	protein_coding	Blm	ENSMUST00000205730	nonsense_mediated_decay		7	-1	80467471	465
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000033769	protein_coding	alternative2	X	-1	74023913	2890
ENSMUSG00000025466	protein_coding	Fuom	ENSMUST00000138197	retained_intron		7	-1	140102330	443
ENSMUSG00000027201	protein_coding	Myef2	ENSMUST00000089825	protein_coding		2	-1	125116873	1631
ENSMUSG00000027201	protein_coding	Myef2	ENSMUST00000137091	protein_coding		2	-1	125123414	1337
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000148317	protein_coding		X	-1	74018334	731
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000128436	protein_coding		X	-1	74019941	559
ENSMUSG00000030528	protein_coding	Blm	ENSMUST00000205263	retained_intron		7	-1	80514692	3581
ENSMUSG00000060519	protein_coding	Tor3a	ENSMUST00000079625	protein_coding	principal1	1	-1	156674356	3285
ENSMUSG00000030528	protein_coding	Blm	ENSMUST00000205713	retained_intron		7	-1	80471781	2507
ENSMUSG00000027201	protein_coding	Myef2	ENSMUST00000149911	retained_intron		2	-1	125123575	1801
ENSMUSG00000030528	protein_coding	Blm	ENSMUST00000205584	retained_intron		7	-1	80481904	749
ENSMUSG00000060519	protein_coding	Tor3a	ENSMUST00000150557	nonsense_mediated_decay		1	-1	156674356	3355
ENSMUSG00000034263	protein_coding	Ints14	ENSMUST00000170517	protein_coding	principal1	9	1	64960905	2820
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000114353	protein_coding	alternative2	X	-1	74023745	1896
ENSMUSG00000099707	lincRNA	Gm8883	ENSMUST00000189680	lincRNA		1	1	71888112	699
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000101458	protein_coding	alternative2	X	-1	74023745	2052
ENSMUSG00000099707	lincRNA	Gm8883	ENSMUST00000188258	lincRNA		1	1	71888117	545
ENSMUSG00000060519	protein_coding	Tor3a	ENSMUST00000122242	nonsense_mediated_decay		1	-1	156674314	1750
ENSMUSG00000027201	protein_coding	Myef2	ENSMUST00000067780	protein_coding	alternative2	2	-1	125123660	2999
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000152979	nonsense_mediated_decay		11	1	69016086	3976
ENSMUSG00000099707	lincRNA	Gm8883	ENSMUST00000187594	lincRNA		1	1	71888402	454
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000138397	protein_coding		X	-1	74020988	771
ENSMUSG00000099707	lincRNA	Gm8883	ENSMUST00000188676	lincRNA		1	1	71888503	399
ENSMUSG00000060519	protein_coding	Tor3a	ENSMUST00000154353	processed_transcript		1	-1	156658458	491
ENSMUSG00000060519	protein_coding	Tor3a	ENSMUST00000152604	processed_transcript		1	-1	156666730	284
ENSMUSG00000034263	protein_coding	Ints14	ENSMUST00000037504	protein_coding	principal1	9	1	64960937	2837
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000126583	protein_coding		X	-1	74022496	1150
ENSMUSG00000060519	protein_coding	Tor3a	ENSMUST00000190607	protein_coding		1	-1	156674335	453
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000140130	retained_intron		X	-1	74022651	644
ENSMUSG00000034263	protein_coding	Ints14	ENSMUST00000215789	retained_intron		9	1	64961689	1247
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000116359	protein_coding	principal3	11	1	69016097	3978
ENSMUSG00000060519	protein_coding	Tor3a	ENSMUST00000188964	protein_coding	principal1	1	-1	156674314	1750
ENSMUSG00000079048	antisense	4933413L06Rik	ENSMUST00000111588	antisense		13	-1	117720011	922
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000132144	protein_coding		X	-1	74023091	384
ENSMUSG00000079048	antisense	4933413L06Rik	ENSMUST00000110292	antisense		13	-1	117719987	809
ENSMUSG00000095820	unprocessed_pseudogene	Gm15098	ENSMUST00000119036	unprocessed_pseudogene		X	1	149327076	1508
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000146621	processed_transcript		11	1	69016134	645
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000124580	protein_coding		X	-1	74023173	596
ENSMUSG00000097497	lincRNA	Gm26652	ENSMUST00000181672	lincRNA		X	-1	19225263	475
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000161384	retained_intron		11	1	69027672	466
ENSMUSG00000021730	protein_coding	Hcn1	ENSMUST00000207599	retained_intron		13	1	117602320	5019
ENSMUSG00000097497	lincRNA	Gm26652	ENSMUST00000180592	lincRNA		X	-1	19237856	373
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000123871	processed_transcript		11	1	69029058	752
ENSMUSG00000093851	unprocessed_pseudogene	Gm15089	ENSMUST00000122332	unprocessed_pseudogene		X	1	149331749	1196
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000124417	protein_coding		X	-1	74022944	441
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000154126	processed_transcript		11	1	69031234	823
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000149809	processed_transcript		X	-1	74023727	704
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000143404	retained_intron		11	1	69033875	593
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000145677	retained_intron		X	-1	74023808	834
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000162256	retained_intron		11	1	69034521	530
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000146210	retained_intron		X	-1	74023376	576
ENSMUSG00000095408	processed_pseudogene	Gm8366	ENSMUST00000118751	processed_pseudogene		X	1	149380417	1769
ENSMUSG00000020898	protein_coding	Ctc1	ENSMUST00000161271	retained_intron		11	1	69034879	516
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000144353	processed_transcript		X	-1	74023508	463
ENSMUSG00000031980	protein_coding	Agt	ENSMUST00000238882	protein_coding	alternative2	8	-1	124569706	1891
ENSMUSG00000096008	antisense	Gm15100	ENSMUST00000180357	antisense		X	-1	149447585	573
ENSMUSG00000031980	protein_coding	Agt	ENSMUST00000063278	protein_coding	principal2	8	-1	124569706	1891
ENSMUSG00000031392	protein_coding	Irak1	ENSMUST00000128759	retained_intron		X	-1	74023831	661
ENSMUSG00000035183	protein_coding	Slc24a5	ENSMUST00000070353	protein_coding	principal1	2	1	125068124	1954
ENSMUSG00000021730	protein_coding	Hcn1	ENSMUST00000006991	protein_coding	principal1	13	1	117602480	14141
ENSMUSG00000101211	lincRNA	Gm28818	ENSMUST00000187553	lincRNA		1	-1	71917125	2989
ENSMUSG00000035183	protein_coding	Slc24a5	ENSMUST00000139615	processed_transcript		2	1	125069244	494
ENSMUSG00000101211	lincRNA	Gm28818	ENSMUST00000189983	lincRNA		1	-1	71898935	237
ENSMUSG00000035183	protein_coding	Slc24a5	ENSMUST00000149963	retained_intron		2	1	125080355	604
ENSMUSG00000091010	processed_pseudogene	Gm17107	ENSMUST00000170983	processed_pseudogene		14	-1	3602755	553
ENSMUSG00000091311	protein_coding	Spata31d1b	ENSMUST00000165133	protein_coding	principal1	13	1	59712284	4287
ENSMUSG00000059483	processed_pseudogene	Gm5528	ENSMUST00000076314	processed_pseudogene		1	1	72004288	480
ENSMUSG00000095368	protein_coding	Gm3012	ENSMUST00000112802	protein_coding	principal5	14	1	3634512	984
ENSMUSG00000101848	lincRNA	4933417E11Rik	ENSMUST00000188213	lincRNA		1	-1	72005195	1093
ENSMUSG00000095368	protein_coding	Gm3012	ENSMUST00000179486	protein_coding	alternative2	14	1	3634575	612
ENSMUSG00000006675	protein_coding	P4htm	ENSMUST00000006853	protein_coding	principal1	9	-1	108597667	1841
ENSMUSG00000101764	lincRNA	4930556G22Rik	ENSMUST00000185689	lincRNA		1	-1	72038731	741
ENSMUSG00000095621	protein_coding	Gm15085	ENSMUST00000178169	protein_coding	principal1	X	1	149447617	2028
ENSMUSG00000006675	protein_coding	P4htm	ENSMUST00000191674	processed_transcript		9	-1	108579557	265
ENSMUSG00000006675	protein_coding	P4htm	ENSMUST00000194900	retained_intron		9	-1	108582936	667
ENSMUSG00000039717	protein_coding	Ralyl	ENSMUST00000191806	protein_coding		3	1	13471655	661
ENSMUSG00000066273	protein_coding	Olfr33	ENSMUST00000216312	protein_coding	principal1	7	-1	102719070	2372
ENSMUSG00000006675	protein_coding	P4htm	ENSMUST00000195181	retained_intron		9	-1	108597576	2035
ENSMUSG00000066273	protein_coding	Olfr33	ENSMUST00000084817	protein_coding	principal1	7	-1	102714411	957
ENSMUSG00000099820	protein_coding	Olfr1036	ENSMUST00000164985	protein_coding	principal1	2	1	86073992	3203
ENSMUSG00000006675	protein_coding	P4htm	ENSMUST00000192080	protein_coding		9	-1	108597346	558
ENSMUSG00000006675	protein_coding	P4htm	ENSMUST00000193621	protein_coding		9	-1	108597580	1297
ENSMUSG00000101496	processed_pseudogene	Gm8885	ENSMUST00000189382	processed_pseudogene		1	1	72087857	598
ENSMUSG00000102123	lincRNA	Gm4319	ENSMUST00000191139	lincRNA		1	-1	72122001	2048
ENSMUSG00000079402	protein_coding	Gm3020	ENSMUST00000167430	protein_coding	principal1	14	1	3652030	1933
ENSMUSG00000075600	protein_coding	Zc3h3	ENSMUST00000100538	protein_coding	principal1	15	-1	75841915	3362
ENSMUSG00000079402	protein_coding	Gm3020	ENSMUST00000112801	protein_coding		14	1	3667518	450
ENSMUSG00000075600	protein_coding	Zc3h3	ENSMUST00000229970	processed_transcript		15	-1	75828209	809
ENSMUSG00000061259	protein_coding	Tmprss11d	ENSMUST00000031175	protein_coding	principal1	5	-1	86373420	2716
ENSMUSG00000075600	protein_coding	Zc3h3	ENSMUST00000229000	processed_transcript		15	-1	75812859	572
ENSMUSG00000061259	protein_coding	Tmprss11d	ENSMUST00000122377	protein_coding		5	-1	86327736	2256
ENSMUSG00000059112	protein_coding	Olfr1263	ENSMUST00000214382	protein_coding	principal1	2	1	90012131	4400
ENSMUSG00000075205	protein_coding	Olfr1037	ENSMUST00000216886	protein_coding	principal1	2	-1	86087382	1755
ENSMUSG00000028005	protein_coding	Gucy1b1	ENSMUST00000029635	protein_coding	principal1	3	-1	82074685	3223
ENSMUSG00000082680	processed_pseudogene	Gm14885	ENSMUST00000117969	processed_pseudogene		X	-1	19386786	496
ENSMUSG00000004100	protein_coding	Ppan	ENSMUST00000004203	protein_coding	principal1	9	1	20888175	1670
ENSMUSG00000059112	protein_coding	Olfr1263	ENSMUST00000217065	protein_coding	principal1	2	1	90012153	4186
ENSMUSG00000075205	protein_coding	Olfr1037	ENSMUST00000213333	protein_coding	principal1	2	-1	86087382	1610
ENSMUSG00000075205	protein_coding	Olfr1037	ENSMUST00000216020	protein_coding	principal1	2	-1	86087385	1359
ENSMUSG00000059112	protein_coding	Olfr1263	ENSMUST00000216764	processed_transcript		2	1	90012193	4079
ENSMUSG00000028005	protein_coding	Gucy1b1	ENSMUST00000193597	protein_coding		3	-1	82074689	3171
ENSMUSG00000113555	processed_pseudogene	Gm10095	ENSMUST00000222765	processed_pseudogene		12	-1	86846467	483
ENSMUSG00000059112	protein_coding	Olfr1263	ENSMUST00000111507	protein_coding	principal1	2	1	90014891	1029
ENSMUSG00000075205	protein_coding	Olfr1037	ENSMUST00000099911	protein_coding	principal1	2	-1	86085854	1125
ENSMUSG00000028005	protein_coding	Gucy1b1	ENSMUST00000192508	retained_intron		3	-1	82035322	709
ENSMUSG00000029234	protein_coding	Tmem165	ENSMUST00000031144	protein_coding	principal1	5	1	76183880	1897
ENSMUSG00000028005	protein_coding	Gucy1b1	ENSMUST00000193085	processed_transcript		3	-1	82074673	712
ENSMUSG00000100998	lincRNA	Gm28864	ENSMUST00000189251	lincRNA		4	-1	114673340	644
ENSMUSG00000004100	protein_coding	Ppan	ENSMUST00000135608	retained_intron		9	1	20888250	1157
ENSMUSG00000068149	protein_coding	Tex13c3	ENSMUST00000089246	protein_coding	principal1	X	-1	19481319	876
ENSMUSG00000004100	protein_coding	Ppan	ENSMUST00000145231	retained_intron		9	1	20888265	3914
ENSMUSG00000004100	protein_coding	Ppan	ENSMUST00000157047	retained_intron		9	1	20888267	656
ENSMUSG00000004100	protein_coding	Ppan	ENSMUST00000214331	nonsense_mediated_decay		9	1	20888276	787
ENSMUSG00000004100	protein_coding	Ppan	ENSMUST00000147780	retained_intron		9	1	20888285	1834
ENSMUSG00000039395	protein_coding	Mreg	ENSMUST00000048860	protein_coding	principal1	1	-1	72212307	2284
ENSMUSG00000029234	protein_coding	Tmem165	ENSMUST00000136424	processed_transcript		5	1	76183950	462
ENSMUSG00000004100	protein_coding	Ppan	ENSMUST00000153227	retained_intron		9	1	20890638	528
ENSMUSG00000029234	protein_coding	Tmem165	ENSMUST00000130842	protein_coding		5	1	76199117	649
ENSMUSG00000029234	protein_coding	Tmem165	ENSMUST00000138544	retained_intron		5	1	76199445	821
ENSMUSG00000105351	processed_pseudogene	Gm43157	ENSMUST00000198223	processed_pseudogene		3	-1	122152619	412
ENSMUSG00000029234	protein_coding	Tmem165	ENSMUST00000153633	processed_transcript		5	1	76204120	408
ENSMUSG00000086825	lincRNA	Gm15675	ENSMUST00000130486	lincRNA		1	-1	130437191	3681
ENSMUSG00000028459	protein_coding	Cd72	ENSMUST00000098104	protein_coding	alternative2	4	-1	43454627	2583
ENSMUSG00000083152	transcribed_processed_pseudogene	Apc-ps1	ENSMUST00000119356	transcribed_processed_pseudogene		5	1	76196625	470
ENSMUSG00000039717	protein_coding	Ralyl	ENSMUST00000193117	protein_coding	principal1	3	1	13471682	2933
ENSMUSG00000039717	protein_coding	Ralyl	ENSMUST00000211860	protein_coding		3	1	13473220	717
ENSMUSG00000039717	protein_coding	Ralyl	ENSMUST00000192209	protein_coding		3	1	13946393	662
ENSMUSG00000022391	protein_coding	Rangap1	ENSMUST00000170134	protein_coding	principal1	15	-1	81729901	2984
ENSMUSG00000042540	protein_coding	Acot5	ENSMUST00000046422	protein_coding	principal1	12	1	84069325	1518
ENSMUSG00000026401	protein_coding	Cd55b	ENSMUST00000112488	protein_coding	principal1	1	-1	130423009	1325
ENSMUSG00000039717	protein_coding	Ralyl	ENSMUST00000171075	protein_coding		3	1	13946404	1459
ENSMUSG00000040013	protein_coding	Fkbp6	ENSMUST00000201791	protein_coding		5	-1	135350014	1297
ENSMUSG00000026401	protein_coding	Cd55b	ENSMUST00000119432	protein_coding		1	-1	130423009	986
ENSMUSG00000042540	protein_coding	Acot5	ENSMUST00000072505	protein_coding		12	1	84069325	1401
ENSMUSG00000022391	protein_coding	Rangap1	ENSMUST00000052374	protein_coding	principal1	15	-1	81730003	3033
ENSMUSG00000039717	protein_coding	Ralyl	ENSMUST00000108372	protein_coding		3	1	13946411	1980
ENSMUSG00000026401	protein_coding	Cd55b	ENSMUST00000136497	processed_transcript		1	-1	130422740	728
ENSMUSG00000039717	protein_coding	Ralyl	ENSMUST00000108373	protein_coding		3	1	13776848	267
ENSMUSG00000087691	antisense	Cd55os	ENSMUST00000143266	antisense		1	1	130422824	2438
ENSMUSG00000044515	processed_pseudogene	Gm8385	ENSMUST00000058999	processed_pseudogene		12	-1	84087641	643
ENSMUSG00000104514	processed_pseudogene	Gm37164	ENSMUST00000192809	processed_pseudogene		3	-1	13670145	637
ENSMUSG00000110927	processed_pseudogene	Gm48506	ENSMUST00000213873	processed_pseudogene		9	1	5796779	255
ENSMUSG00000102891	processed_pseudogene	Gm19114	ENSMUST00000193972	processed_pseudogene		3	-1	13840231	1357
ENSMUSG00000022391	protein_coding	Rangap1	ENSMUST00000171115	protein_coding	principal1	15	-1	81729862	2743
ENSMUSG00000102215	lincRNA	Gm2464	ENSMUST00000194841	lincRNA		3	-1	13471829	877
ENSMUSG00000111191	processed_pseudogene	Gm6015	ENSMUST00000217493	processed_pseudogene		9	1	5861647	1586
ENSMUSG00000040013	protein_coding	Fkbp6	ENSMUST00000044972	protein_coding	principal3	5	-1	135350044	1447
ENSMUSG00000103856	processed_pseudogene	Gm2474	ENSMUST00000195162	processed_pseudogene		3	1	13749954	559
ENSMUSG00000022391	protein_coding	Rangap1	ENSMUST00000229705	retained_intron		15	-1	81710460	451
ENSMUSG00000022391	protein_coding	Rangap1	ENSMUST00000230302	protein_coding		15	-1	81729399	990
ENSMUSG00000040013	protein_coding	Fkbp6	ENSMUST00000201784	protein_coding	alternative2	5	-1	135349875	1235
ENSMUSG00000114903	lincRNA	Gm46419	ENSMUST00000224724	lincRNA		13	1	59726724	609
ENSMUSG00000114903	lincRNA	Gm46419	ENSMUST00000224350	lincRNA		13	1	59746333	837
ENSMUSG00000022391	protein_coding	Rangap1	ENSMUST00000230287	retained_intron		15	-1	81729880	1685
ENSMUSG00000031981	protein_coding	Capn9	ENSMUST00000093033	protein_coding	principal1	8	1	124576111	2330
ENSMUSG00000022391	protein_coding	Rangap1	ENSMUST00000230726	protein_coding		15	-1	81745530	710
ENSMUSG00000097502	lincRNA	4930528D03Rik	ENSMUST00000225577	lincRNA		13	1	59733630	1348
ENSMUSG00000040013	protein_coding	Fkbp6	ENSMUST00000201534	protein_coding	principal3	5	-1	135350043	1287
ENSMUSG00000031981	protein_coding	Capn9	ENSMUST00000133086	protein_coding		8	1	124576113	224
ENSMUSG00000097502	lincRNA	4930528D03Rik	ENSMUST00000181528	lincRNA		13	1	59733645	1339
ENSMUSG00000031981	protein_coding	Capn9	ENSMUST00000133583	processed_transcript		8	1	124613440	274
ENSMUSG00000097502	lincRNA	4930528D03Rik	ENSMUST00000181700	lincRNA		13	1	59733650	1239
ENSMUSG00000028459	protein_coding	Cd72	ENSMUST00000107926	protein_coding	principal3	4	-1	43454563	1419
ENSMUSG00000028459	protein_coding	Cd72	ENSMUST00000107925	protein_coding	alternative2	4	-1	43454584	1419
ENSMUSG00000029502	protein_coding	Golga3	ENSMUST00000112512	protein_coding	principal3	5	1	110176701	8132
ENSMUSG00000043986	protein_coding	Spata31d1d	ENSMUST00000052978	protein_coding	principal1	13	-1	59731752	3827
ENSMUSG00000081772	processed_pseudogene	Gm13131	ENSMUST00000122228	processed_pseudogene		4	-1	134200150	321
ENSMUSG00000029502	protein_coding	Golga3	ENSMUST00000136900	retained_intron		5	1	110176857	3786
ENSMUSG00000051054	protein_coding	1700014D04Rik	ENSMUST00000180139	protein_coding	principal1	13	-1	59744917	3231
ENSMUSG00000029502	protein_coding	Golga3	ENSMUST00000139611	protein_coding		5	1	110176879	711
ENSMUSG00000051054	protein_coding	1700014D04Rik	ENSMUST00000178508	protein_coding		13	-1	59746752	366
ENSMUSG00000051054	protein_coding	1700014D04Rik	ENSMUST00000055343	protein_coding		13	-1	59742750	795
ENSMUSG00000028459	protein_coding	Cd72	ENSMUST00000030179	protein_coding	alternative2	4	-1	43454628	1505
ENSMUSG00000018572	protein_coding	Phf23	ENSMUST00000018716	protein_coding	principal1	11	1	69995777	2006
ENSMUSG00000073747	protein_coding	Zpld2	ENSMUST00000097849	protein_coding	principal1	4	-1	134203004	2338
ENSMUSG00000029502	protein_coding	Golga3	ENSMUST00000031477	protein_coding	alternative2	5	1	110176879	4805
ENSMUSG00000018572	protein_coding	Phf23	ENSMUST00000101526	protein_coding		11	1	69995876	1706
ENSMUSG00000085837	antisense	Kcnmb4os2	ENSMUST00000144020	antisense		10	1	116473163	1591
ENSMUSG00000028459	protein_coding	Cd72	ENSMUST00000098105	protein_coding	alternative2	4	-1	43454626	1420
ENSMUSG00000085837	antisense	Kcnmb4os2	ENSMUST00000127070	antisense		10	1	116474028	1048
ENSMUSG00000029502	protein_coding	Golga3	ENSMUST00000125380	retained_intron		5	1	110176897	3115
ENSMUSG00000083594	processed_pseudogene	Gm13722	ENSMUST00000117964	processed_pseudogene		2	-1	86093401	3066
ENSMUSG00000085837	antisense	Kcnmb4os2	ENSMUST00000123348	antisense		10	1	116474345	511
ENSMUSG00000104720	sense_intronic	Gm43138	ENSMUST00000199123	sense_intronic		5	1	110206580	708
ENSMUSG00000028459	protein_coding	Cd72	ENSMUST00000134850	retained_intron		4	-1	43449942	654
ENSMUSG00000028459	protein_coding	Cd72	ENSMUST00000140284	retained_intron		4	-1	43452372	443
ENSMUSG00000028459	protein_coding	Cd72	ENSMUST00000133110	retained_intron		4	-1	43454612	701
ENSMUSG00000028459	protein_coding	Cd72	ENSMUST00000151868	processed_transcript		4	-1	43454323	530
ENSMUSG00000085837	antisense	Kcnmb4os2	ENSMUST00000080943	antisense		10	1	116473163	1571
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000013338	protein_coding	principal1	9	-1	108649380	3924
ENSMUSG00000043487	protein_coding	Acot6	ENSMUST00000056822	protein_coding	principal1	12	1	84100654	3388
ENSMUSG00000026208	protein_coding	Des	ENSMUST00000027409	protein_coding	principal1	1	1	75360329	3028
ENSMUSG00000028459	protein_coding	Cd72	ENSMUST00000141198	processed_transcript		4	-1	43454626	400
ENSMUSG00000050577	polymorphic_pseudogene	Olfr1038-ps	ENSMUST00000216665	polymorphic_pseudogene		2	1	86120223	4530
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000193923	retained_intron		9	-1	108606610	3664
ENSMUSG00000043487	protein_coding	Acot6	ENSMUST00000222921	protein_coding		12	1	84100832	3622
ENSMUSG00000026208	protein_coding	Des	ENSMUST00000144894	retained_intron		1	1	75361526	784
ENSMUSG00000050577	polymorphic_pseudogene	Olfr1038-ps	ENSMUST00000149775	protein_coding	principal1	2	1	86120224	1209
ENSMUSG00000018572	protein_coding	Phf23	ENSMUST00000141231	retained_intron		11	1	69995994	723
ENSMUSG00000054934	protein_coding	Kcnmb4	ENSMUST00000068233	protein_coding	principal1	10	-1	116473878	1367
ENSMUSG00000028125	protein_coding	Abca4	ENSMUST00000013995	protein_coding	principal1	3	1	122044443	7263
ENSMUSG00000026208	protein_coding	Des	ENSMUST00000125948	retained_intron		1	1	75362030	835
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000193190	nonsense_mediated_decay		9	-1	108649385	2160
ENSMUSG00000097768	antisense	2310043M15Rik	ENSMUST00000180967	antisense		16	-1	93794901	1580
ENSMUSG00000054934	protein_coding	Kcnmb4	ENSMUST00000164271	processed_transcript		10	-1	116473435	517
ENSMUSG00000054934	protein_coding	Kcnmb4	ENSMUST00000091477	processed_transcript		10	-1	116446408	511
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000194073	nonsense_mediated_decay		9	-1	108608683	780
ENSMUSG00000085653	antisense	Gm15179	ENSMUST00000152799	antisense		1	-1	75375012	671
ENSMUSG00000054934	protein_coding	Kcnmb4	ENSMUST00000087965	processed_transcript		10	-1	116473422	1626
ENSMUSG00000085653	antisense	Gm15179	ENSMUST00000130095	antisense		1	-1	75370451	565
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000192686	retained_intron		9	-1	108607355	650
ENSMUSG00000075204	protein_coding	Olfr1039	ENSMUST00000216566	protein_coding	principal1	2	-1	86135928	4166
ENSMUSG00000028125	protein_coding	Abca4	ENSMUST00000132199	processed_transcript		3	1	122046576	3511
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000192853	retained_intron		9	-1	108607958	263
ENSMUSG00000020164	antisense	Kcnmb4os1	ENSMUST00000134586	antisense		10	1	116418052	824
ENSMUSG00000075204	protein_coding	Olfr1039	ENSMUST00000214364	protein_coding	principal1	2	-1	86135928	3925
ENSMUSG00000028125	protein_coding	Abca4	ENSMUST00000150738	processed_transcript		3	1	122074454	1128
ENSMUSG00000075204	protein_coding	Olfr1039	ENSMUST00000099910	protein_coding	principal1	2	-1	86131661	960
ENSMUSG00000028125	protein_coding	Abca4	ENSMUST00000140913	retained_intron		3	1	122120040	1198
ENSMUSG00000028125	protein_coding	Abca4	ENSMUST00000136624	retained_intron		3	1	122121754	531
ENSMUSG00000106229	sense_intronic	Gm19409	ENSMUST00000198244	sense_intronic		5	1	30815620	2858
ENSMUSG00000087258	antisense	Gm15461	ENSMUST00000143488	antisense		5	-1	30822612	235
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000193197	protein_coding		9	-1	108649386	570
ENSMUSG00000028125	protein_coding	Abca4	ENSMUST00000141135	protein_coding		3	1	122132002	3606
ENSMUSG00000028125	protein_coding	Abca4	ENSMUST00000144949	retained_intron		3	1	122162317	700
ENSMUSG00000028125	protein_coding	Abca4	ENSMUST00000137616	retained_intron		3	1	122163818	652
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000193552	nonsense_mediated_decay		9	-1	108644100	793
ENSMUSG00000028125	protein_coding	Abca4	ENSMUST00000197728	processed_transcript		3	1	122169965	765
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000195741	retained_intron		9	-1	108630144	1518
ENSMUSG00000028125	protein_coding	Abca4	ENSMUST00000136358	retained_intron		3	1	122173010	1520
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000194290	retained_intron		9	-1	108649318	1688
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000193643	nonsense_mediated_decay		9	-1	108649342	741
ENSMUSG00000018572	protein_coding	Phf23	ENSMUST00000133485	protein_coding		11	1	69996388	1607
ENSMUSG00000064145	protein_coding	Arih2	ENSMUST00000195623	retained_intron		9	-1	108649369	435
ENSMUSG00000018572	protein_coding	Phf23	ENSMUST00000138186	protein_coding		11	1	69996731	652
ENSMUSG00000018572	protein_coding	Phf23	ENSMUST00000123817	processed_transcript		11	1	69996941	417
ENSMUSG00000104887	unprocessed_pseudogene	Gm43158	ENSMUST00000198484	unprocessed_pseudogene		3	-1	122227370	1555
ENSMUSG00000018572	protein_coding	Phf23	ENSMUST00000146789	processed_transcript		11	1	69996957	317
ENSMUSG00000018572	protein_coding	Phf23	ENSMUST00000153684	protein_coding		11	1	69996991	1797
ENSMUSG00000104799	processed_pseudogene	Gm9361	ENSMUST00000198695	processed_pseudogene		3	-1	122185004	1507
ENSMUSG00000018572	protein_coding	Phf23	ENSMUST00000135814	protein_coding		11	1	69997109	2214
ENSMUSG00000021702	protein_coding	Thbs4	ENSMUST00000022213	protein_coding	principal1	13	-1	92794818	3198
ENSMUSG00000032602	protein_coding	Slc25a20	ENSMUST00000194088	retained_intron		9	1	108662088	2751
ENSMUSG00000021702	protein_coding	Thbs4	ENSMUST00000168299	retained_intron		13	-1	92774974	428
ENSMUSG00000011008	protein_coding	Mcoln2	ENSMUST00000011152	protein_coding		3	1	146149833	2520
ENSMUSG00000034168	protein_coding	Irf2bpl	ENSMUST00000038422	protein_coding	principal1	12	-1	86884798	4098
ENSMUSG00000011008	protein_coding	Mcoln2	ENSMUST00000169533	retained_intron		3	1	146149979	855
ENSMUSG00000085870	lincRNA	Gm12829	ENSMUST00000146346	lincRNA		4	1	114680804	2434
ENSMUSG00000073755	protein_coding	5730409E04Rik	ENSMUST00000097886	protein_coding	principal1	4	1	126609818	2886
ENSMUSG00000026189	protein_coding	Pecr	ENSMUST00000027381	protein_coding	principal2	1	-1	72284314	1186
ENSMUSG00000073755	protein_coding	5730409E04Rik	ENSMUST00000164362	protein_coding	principal1	4	1	126609854	2855
ENSMUSG00000032602	protein_coding	Slc25a20	ENSMUST00000035222	protein_coding	principal1	9	1	108662098	1783
ENSMUSG00000024371	protein_coding	C2	ENSMUST00000152417	protein_coding		17	-1	34882026	2157
ENSMUSG00000032602	protein_coding	Slc25a20	ENSMUST00000195260	retained_intron		9	1	108672496	805
ENSMUSG00000081210	processed_pseudogene	Gm12933	ENSMUST00000120203	processed_pseudogene		4	1	126665254	872
ENSMUSG00000055198	protein_coding	Gm12830	ENSMUST00000137570	protein_coding	principal1	4	1	114821722	2306
ENSMUSG00000026189	protein_coding	Pecr	ENSMUST00000134840	nonsense_mediated_decay		1	-1	72284259	1120
ENSMUSG00000085323	antisense	9130410C08Rik	ENSMUST00000155499	antisense		4	-1	114902859	1088
ENSMUSG00000026189	protein_coding	Pecr	ENSMUST00000097698	protein_coding	alternative2	1	-1	72284259	932
ENSMUSG00000024371	protein_coding	C2	ENSMUST00000025230	protein_coding	principal1	17	-1	34882100	2641
ENSMUSG00000026189	protein_coding	Pecr	ENSMUST00000129458	nonsense_mediated_decay		1	-1	72284313	688
ENSMUSG00000011008	protein_coding	Mcoln2	ENSMUST00000098524	protein_coding	principal1	3	1	146150174	2492
ENSMUSG00000024371	protein_coding	C2	ENSMUST00000148431	protein_coding		17	-1	34895547	1946
ENSMUSG00000024371	protein_coding	C2	ENSMUST00000134300	protein_coding		17	-1	34864412	539
ENSMUSG00000011008	protein_coding	Mcoln2	ENSMUST00000170972	protein_coding		3	1	146190365	361
ENSMUSG00000011008	protein_coding	Mcoln2	ENSMUST00000169984	retained_intron		3	1	146192083	653
ENSMUSG00000044792	protein_coding	Isca1	ENSMUST00000057115	protein_coding	principal1	13	-1	59769810	1942
ENSMUSG00000024371	protein_coding	C2	ENSMUST00000127795	retained_intron		17	-1	34864952	479
ENSMUSG00000029166	protein_coding	Mapre3	ENSMUST00000031058	protein_coding	principal3	5	1	30814641	2021
ENSMUSG00000044792	protein_coding	Isca1	ENSMUST00000225850	nonsense_mediated_decay		13	-1	59769788	1918
ENSMUSG00000083213	processed_pseudogene	Gm14875	ENSMUST00000120881	processed_pseudogene		X	1	103680577	319
ENSMUSG00000044792	protein_coding	Isca1	ENSMUST00000225795	retained_intron		13	-1	59758693	3280
ENSMUSG00000024371	protein_coding	C2	ENSMUST00000130728	processed_transcript		17	-1	34881967	850
ENSMUSG00000038949	protein_coding	Cnst	ENSMUST00000040706	protein_coding	principal1	1	1	179546370	4709
ENSMUSG00000044792	protein_coding	Isca1	ENSMUST00000225877	processed_transcript		13	-1	59769477	754
ENSMUSG00000081414	processed_pseudogene	Gm3943	ENSMUST00000118606	processed_pseudogene		X	1	103684615	718
ENSMUSG00000024371	protein_coding	C2	ENSMUST00000174880	processed_transcript		17	-1	34895557	407
ENSMUSG00000038949	protein_coding	Cnst	ENSMUST00000144370	retained_intron		1	1	179546499	3717
ENSMUSG00000024371	protein_coding	C2	ENSMUST00000174279	processed_transcript		17	-1	34898265	535
ENSMUSG00000044792	protein_coding	Isca1	ENSMUST00000160628	retained_intron		13	-1	59769776	2553
ENSMUSG00000029166	protein_coding	Mapre3	ENSMUST00000201347	retained_intron		5	1	30814733	2442
ENSMUSG00000044792	protein_coding	Isca1	ENSMUST00000225284	retained_intron		13	-1	59763567	2518
ENSMUSG00000038949	protein_coding	Cnst	ENSMUST00000153962	retained_intron		1	1	179546509	1350
ENSMUSG00000044792	protein_coding	Isca1	ENSMUST00000224636	retained_intron		13	-1	59769753	4060
ENSMUSG00000029166	protein_coding	Mapre3	ENSMUST00000200692	protein_coding	alternative1	5	1	30814754	1816
ENSMUSG00000038949	protein_coding	Cnst	ENSMUST00000143270	processed_transcript		1	1	179593390	617
ENSMUSG00000029166	protein_coding	Mapre3	ENSMUST00000202256	retained_intron		5	1	30814760	910
ENSMUSG00000029166	protein_coding	Mapre3	ENSMUST00000202501	protein_coding		5	1	30853799	692
ENSMUSG00000029166	protein_coding	Mapre3	ENSMUST00000202025	retained_intron		5	1	30864522	488
ENSMUSG00000032601	protein_coding	Prkar2a	ENSMUST00000192344	protein_coding		9	1	108689314	462
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238759	protein_coding	principal2	4	-1	119415521	3909
ENSMUSG00000111944	processed_pseudogene	Gm18024	ENSMUST00000218516	processed_pseudogene		12	-1	31199490	690
ENSMUSG00000095953	processed_transcript	6030469F06Rik	ENSMUST00000218642	lincRNA		12	1	31142760	2800
ENSMUSG00000095953	processed_transcript	6030469F06Rik	ENSMUST00000218473	processed_transcript		12	1	31168862	1558
ENSMUSG00000095953	processed_transcript	6030469F06Rik	ENSMUST00000179160	processed_transcript		12	1	31184623	555
ENSMUSG00000092511	protein_coding	Gm20547	ENSMUST00000146299	protein_coding	principal1	17	-1	34882042	3893
ENSMUSG00000033460	protein_coding	Armcx1	ENSMUST00000113199	protein_coding	principal1	X	1	134717988	2413
ENSMUSG00000092511	protein_coding	Gm20547	ENSMUST00000129891	protein_coding		17	-1	34872507	2916
ENSMUSG00000030230	protein_coding	Plcz1	ENSMUST00000032356	protein_coding	principal1	6	-1	140041457	2271
ENSMUSG00000030230	protein_coding	Plcz1	ENSMUST00000137148	nonsense_mediated_decay		6	-1	140041431	2226
ENSMUSG00000030230	protein_coding	Plcz1	ENSMUST00000129986	nonsense_mediated_decay		6	-1	140041412	2178
ENSMUSG00000030230	protein_coding	Plcz1	ENSMUST00000149931	nonsense_mediated_decay		6	-1	140041412	989
ENSMUSG00000108251	processed_pseudogene	Gm44112	ENSMUST00000204787	processed_pseudogene		6	-1	140033532	372
ENSMUSG00000048126	protein_coding	Col6a3	ENSMUST00000097653	protein_coding	principal1	1	-1	90843952	9001
ENSMUSG00000041791	protein_coding	Capza3	ENSMUST00000204342	processed_transcript		6	1	140041252	771
ENSMUSG00000041791	protein_coding	Capza3	ENSMUST00000043797	protein_coding	principal1	6	1	140041557	1222
ENSMUSG00000048126	protein_coding	Col6a3	ENSMUST00000150769	retained_intron		1	-1	90773215	646
ENSMUSG00000048126	protein_coding	Col6a3	ENSMUST00000136916	retained_intron		1	-1	90807982	3275
ENSMUSG00000035248	protein_coding	Tut7	ENSMUST00000071703	protein_coding	principal1	13	-1	59823147	5869
ENSMUSG00000048126	protein_coding	Col6a3	ENSMUST00000145750	retained_intron		1	-1	90794721	615
ENSMUSG00000035248	protein_coding	Tut7	ENSMUST00000224480	protein_coding		13	-1	59809506	4186
ENSMUSG00000048126	protein_coding	Col6a3	ENSMUST00000130846	protein_coding		1	-1	90843928	5321
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000045004	protein_coding	principal1	16	1	93711904	7319
ENSMUSG00000035248	protein_coding	Tut7	ENSMUST00000224320	retained_intron		13	-1	59785374	4337
ENSMUSG00000048126	protein_coding	Col6a3	ENSMUST00000187753	protein_coding		1	-1	90843971	476
ENSMUSG00000035248	protein_coding	Tut7	ENSMUST00000224845	retained_intron		13	-1	59780620	2452
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000154606	protein_coding		4	-1	119359895	2724
ENSMUSG00000048126	protein_coding	Col6a3	ENSMUST00000188587	protein_coding		1	-1	90843971	8285
ENSMUSG00000048126	protein_coding	Col6a3	ENSMUST00000056925	protein_coding		1	-1	90843971	10106
ENSMUSG00000035248	protein_coding	Tut7	ENSMUST00000225607	processed_transcript		13	-1	59784840	757
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000226335	retained_intron		16	1	93711931	1189
ENSMUSG00000035248	protein_coding	Tut7	ENSMUST00000225944	retained_intron		13	-1	59797130	2095
ENSMUSG00000103061	TEC	Gm36970	ENSMUST00000193688	TEC		1	-1	90839133	1859
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000226418	retained_intron		16	1	93711934	1819
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000228846	protein_coding		16	1	93716066	429
ENSMUSG00000035248	protein_coding	Tut7	ENSMUST00000225241	nonsense_mediated_decay		13	-1	59809478	1056
ENSMUSG00000014856	protein_coding	Tmem208	ENSMUST00000015000	protein_coding	principal1	8	1	105326354	785
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000227156	protein_coding		16	1	93730099	7340
ENSMUSG00000035248	protein_coding	Tut7	ENSMUST00000225576	protein_coding		13	-1	59823133	2499
ENSMUSG00000014856	protein_coding	Tmem208	ENSMUST00000153146	nonsense_mediated_decay		8	1	105326362	801
ENSMUSG00000020679	protein_coding	Hnf1b	ENSMUST00000135975	protein_coding		11	1	83850063	763
ENSMUSG00000035248	protein_coding	Tut7	ENSMUST00000225179	protein_coding		13	-1	59823114	619
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000226836	protein_coding		16	1	93762677	2182
ENSMUSG00000035248	protein_coding	Tut7	ENSMUST00000225987	protein_coding		13	-1	59822588	435
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000139727	protein_coding	principal2	18	1	36342520	1026
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000226215	nonsense_mediated_decay		16	1	93763182	4703
ENSMUSG00000014856	protein_coding	Tmem208	ENSMUST00000126705	nonsense_mediated_decay		8	1	105326388	895
ENSMUSG00000114835	sense_intronic	Gm48194	ENSMUST00000226102	sense_intronic		13	-1	59781578	517
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000237375	protein_coding	alternative2	18	1	36342580	1385
ENSMUSG00000014856	protein_coding	Tmem208	ENSMUST00000098453	protein_coding		8	1	105326395	950
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000235403	protein_coding	alternative2	18	1	36342672	1122
ENSMUSG00000114763	protein_coding	Gm49354	ENSMUST00000225581	protein_coding	principal1	13	-1	59782245	343
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000236593	protein_coding	principal2	18	1	36342798	1050
ENSMUSG00000014856	protein_coding	Tmem208	ENSMUST00000109372	nonsense_mediated_decay		8	1	105326455	603
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000226535	retained_intron		16	1	93773907	877
ENSMUSG00000004864	protein_coding	Mapk13	ENSMUST00000233984	protein_coding	principal1	17	1	28769297	2937
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000227939	processed_transcript		16	1	93776715	376
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000237329	nonsense_mediated_decay		18	1	36342832	1162
ENSMUSG00000089875	antisense	Etohd2	ENSMUST00000225619	antisense		13	1	59769497	844
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000228261	protein_coding		16	1	93777401	556
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000236374	protein_coding	alternative2	18	1	36342937	1505
ENSMUSG00000062044	protein_coding	Lmtk3	ENSMUST00000209617	protein_coding	alternative2	7	1	45783738	5051
ENSMUSG00000089875	antisense	Etohd2	ENSMUST00000163053	antisense		13	1	59769965	1350
ENSMUSG00000033460	protein_coding	Armcx1	ENSMUST00000035748	protein_coding	principal1	X	1	134717989	2303
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000236024	nonsense_mediated_decay		18	1	36344586	1149
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000232210	retained_intron		16	1	93792789	632
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000235864	protein_coding	alternative2	18	1	36348659	1101
ENSMUSG00000062044	protein_coding	Lmtk3	ENSMUST00000209701	protein_coding		7	1	45783801	771
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000227278	retained_intron		16	1	93798834	1573
ENSMUSG00000089875	antisense	Etohd2	ENSMUST00000162450	antisense		13	1	59769966	4862
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000050584	protein_coding	alternative2	18	1	36348697	831
ENSMUSG00000014778	protein_coding	Fhod1	ENSMUST00000132777	retained_intron		8	-1	105347909	4304
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000231882	retained_intron		16	1	93800189	567
ENSMUSG00000033460	protein_coding	Armcx1	ENSMUST00000113197	protein_coding	principal1	X	1	134718020	2179
ENSMUSG00000022946	protein_coding	Dop1b	ENSMUST00000228423	processed_transcript		16	1	93809434	693
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000145439	retained_intron		18	1	36348763	1795
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000235576	nonsense_mediated_decay		18	1	36348763	872
ENSMUSG00000062044	protein_coding	Lmtk3	ENSMUST00000233503	protein_coding	alternative2	7	1	45785380	4830
ENSMUSG00000116927	antisense	Gm30881	ENSMUST00000231503	antisense		16	-1	93833019	564
ENSMUSG00000062044	protein_coding	Lmtk3	ENSMUST00000120005	protein_coding	principal2	7	1	45785380	4997
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000152804	protein_coding	principal2	18	1	36348774	445
ENSMUSG00000033460	protein_coding	Armcx1	ENSMUST00000051256	protein_coding	principal1	X	1	134717970	2253
ENSMUSG00000062044	protein_coding	Lmtk3	ENSMUST00000211609	protein_coding		7	1	45785387	582
ENSMUSG00000046727	protein_coding	Cystm1	ENSMUST00000144158	protein_coding		18	1	36365781	369
ENSMUSG00000062044	protein_coding	Lmtk3	ENSMUST00000211309	retained_intron		7	1	45785510	872
ENSMUSG00000112518	processed_pseudogene	Gm48117	ENSMUST00000218421	processed_pseudogene		12	1	31234572	305
ENSMUSG00000062044	protein_coding	Lmtk3	ENSMUST00000209351	nonsense_mediated_decay		7	1	45786557	877
ENSMUSG00000112187	protein_coding	Gm6993	ENSMUST00000219110	protein_coding	principal1	12	1	31240770	210
ENSMUSG00000062044	protein_coding	Lmtk3	ENSMUST00000211127	nonsense_mediated_decay		7	1	45787748	724
ENSMUSG00000033460	protein_coding	Armcx1	ENSMUST00000113198	protein_coding	principal1	X	1	134718013	2085
ENSMUSG00000112567	processed_pseudogene	Gm32899	ENSMUST00000219694	processed_pseudogene		12	-1	31258857	207
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000079838	protein_coding	alternative2	15	-1	97831494	3985
ENSMUSG00000014778	protein_coding	Fhod1	ENSMUST00000014922	protein_coding	principal1	8	-1	105347953	3928
ENSMUSG00000033460	protein_coding	Armcx1	ENSMUST00000113201	protein_coding	principal1	X	1	134717963	2228
ENSMUSG00000062044	protein_coding	Lmtk3	ENSMUST00000072580	protein_coding	principal2	7	1	45783947	4807
ENSMUSG00000014778	protein_coding	Fhod1	ENSMUST00000134837	retained_intron		8	-1	105331566	548
ENSMUSG00000014778	protein_coding	Fhod1	ENSMUST00000136439	retained_intron		8	-1	105337907	721
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000101501	protein_coding		X	1	71215006	770
ENSMUSG00000033460	protein_coding	Armcx1	ENSMUST00000125684	processed_transcript		X	1	134718003	320
ENSMUSG00000033460	protein_coding	Armcx1	ENSMUST00000138421	processed_transcript		X	1	134718003	415
ENSMUSG00000033460	protein_coding	Armcx1	ENSMUST00000137173	processed_transcript		X	1	134719257	951
ENSMUSG00000033460	protein_coding	Armcx1	ENSMUST00000129697	processed_transcript		X	1	134717988	906
ENSMUSG00000021704	protein_coding	Mtx3	ENSMUST00000223719	retained_intron		13	1	92844760	1810
ENSMUSG00000021704	protein_coding	Mtx3	ENSMUST00000076169	protein_coding	principal1	13	1	92844787	6275
ENSMUSG00000090231	protein_coding	Cfb	ENSMUST00000141295	protein_coding		17	-1	34859025	973
ENSMUSG00000021704	protein_coding	Mtx3	ENSMUST00000224368	nonsense_mediated_decay		13	1	92845198	435
ENSMUSG00000004864	protein_coding	Mapk13	ENSMUST00000124099	retained_intron		17	1	28769336	1177
ENSMUSG00000004864	protein_coding	Mapk13	ENSMUST00000233460	protein_coding		17	1	28769347	621
ENSMUSG00000039456	protein_coding	Morc3	ENSMUST00000202261	protein_coding	principal1	16	1	93832121	4179
ENSMUSG00000004864	protein_coding	Mapk13	ENSMUST00000129096	nonsense_mediated_decay		17	1	28769349	1830
ENSMUSG00000004864	protein_coding	Mapk13	ENSMUST00000133786	nonsense_mediated_decay		17	1	28769372	815
ENSMUSG00000039456	protein_coding	Morc3	ENSMUST00000201497	retained_intron		16	1	93832235	735
ENSMUSG00000039456	protein_coding	Morc3	ENSMUST00000201097	protein_coding		16	1	93832257	1386
ENSMUSG00000004864	protein_coding	Mapk13	ENSMUST00000233109	protein_coding		17	1	28769383	825
ENSMUSG00000004864	protein_coding	Mapk13	ENSMUST00000233051	nonsense_mediated_decay		17	1	28769390	864
ENSMUSG00000004864	protein_coding	Mapk13	ENSMUST00000233676	nonsense_mediated_decay		17	1	28769410	1127
ENSMUSG00000004864	protein_coding	Mapk13	ENSMUST00000004986	protein_coding		17	1	28769419	1526
ENSMUSG00000039456	protein_coding	Morc3	ENSMUST00000201754	nonsense_mediated_decay		16	1	93832263	1298
ENSMUSG00000039456	protein_coding	Morc3	ENSMUST00000232425	retained_intron		16	1	93832267	2114
ENSMUSG00000110932	processed_pseudogene	Gm48640	ENSMUST00000216024	processed_pseudogene		9	-1	5952667	226
ENSMUSG00000024346	protein_coding	Pfdn1	ENSMUST00000025204	protein_coding	principal1	18	-1	36454524	1109
ENSMUSG00000039456	protein_coding	Morc3	ENSMUST00000202663	retained_intron		16	1	93844624	882
ENSMUSG00000024346	protein_coding	Pfdn1	ENSMUST00000237792	protein_coding		18	-1	36454524	1024
ENSMUSG00000039456	protein_coding	Morc3	ENSMUST00000231891	retained_intron		16	1	93847277	246
ENSMUSG00000111707	processed_pseudogene	Gm9662	ENSMUST00000216748	processed_pseudogene		9	1	6070313	1206
ENSMUSG00000039456	protein_coding	Morc3	ENSMUST00000201706	retained_intron		16	1	93853782	634
ENSMUSG00000003271	protein_coding	Sult2b1	ENSMUST00000075571	protein_coding	principal2	7	-1	45759612	1193
ENSMUSG00000024346	protein_coding	Pfdn1	ENSMUST00000237499	protein_coding		18	-1	36451244	485
ENSMUSG00000084821	antisense	Gm15880	ENSMUST00000142678	antisense		7	1	80636017	2884
ENSMUSG00000039456	protein_coding	Morc3	ENSMUST00000232639	nonsense_mediated_decay		16	1	93860513	726
ENSMUSG00000003271	protein_coding	Sult2b1	ENSMUST00000209739	protein_coding	alternative2	7	-1	45784669	1858
ENSMUSG00000039456	protein_coding	Morc3	ENSMUST00000044068	protein_coding	principal1	16	1	93832121	4178
ENSMUSG00000032601	protein_coding	Prkar2a	ENSMUST00000035220	protein_coding	principal1	9	1	108692143	4965
ENSMUSG00000003271	protein_coding	Sult2b1	ENSMUST00000210754	protein_coding	alternative2	7	-1	45742483	1242
ENSMUSG00000104597	antisense	B230334C09Rik	ENSMUST00000200255	antisense		3	-1	158076112	8927
ENSMUSG00000032601	protein_coding	Prkar2a	ENSMUST00000195405	protein_coding		9	1	108692457	1143
ENSMUSG00000003271	protein_coding	Sult2b1	ENSMUST00000210147	protein_coding		7	-1	45742483	513
ENSMUSG00000032601	protein_coding	Prkar2a	ENSMUST00000192068	protein_coding		9	1	108716873	599
ENSMUSG00000003271	protein_coding	Sult2b1	ENSMUST00000209435	processed_transcript		7	-1	45742746	422
ENSMUSG00000032601	protein_coding	Prkar2a	ENSMUST00000193215	retained_intron		9	1	108739683	1331
ENSMUSG00000003271	protein_coding	Sult2b1	ENSMUST00000209464	processed_transcript		7	-1	45759530	431
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000116408	protein_coding	alternative2	15	-1	97844502	4226
ENSMUSG00000003271	protein_coding	Sult2b1	ENSMUST00000210021	TEC		7	-1	45784297	1690
ENSMUSG00000032601	protein_coding	Prkar2a	ENSMUST00000195263	processed_transcript		9	1	108748245	435
ENSMUSG00000003271	protein_coding	Sult2b1	ENSMUST00000211779	processed_transcript		7	-1	45784467	1427
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000088402	protein_coding	principal3	15	-1	97831767	4223
ENSMUSG00000109602	antisense	Gm31597	ENSMUST00000211176	antisense		7	1	45742049	515
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000151334	retained_intron		15	-1	97794445	1572
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000121514	protein_coding	alternative2	15	-1	97814863	3767
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000119670	protein_coding	alternative2	15	-1	97844269	3899
ENSMUSG00000055210	protein_coding	Foxd2	ENSMUST00000068654	protein_coding	principal1	4	-1	114908873	2592
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000116409	protein_coding	alternative2	15	-1	97844302	4113
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000118294	protein_coding	alternative2	15	-1	97831494	4069
ENSMUSG00000030527	protein_coding	Crtc3	ENSMUST00000122255	protein_coding	principal1	7	-1	80688877	5115
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238697	protein_coding	alternative2	4	-1	119381298	2317
ENSMUSG00000030527	protein_coding	Crtc3	ENSMUST00000149176	nonsense_mediated_decay		7	-1	80609932	471
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000120683	protein_coding		15	-1	97844164	3701
ENSMUSG00000030527	protein_coding	Crtc3	ENSMUST00000127182	retained_intron		7	-1	80599136	579
ENSMUSG00000030527	protein_coding	Crtc3	ENSMUST00000127326	nonsense_mediated_decay		7	-1	80629626	649
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238723	protein_coding		4	-1	119383760	1707
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000228466	retained_intron		15	-1	97831494	5179
ENSMUSG00000030527	protein_coding	Crtc3	ENSMUST00000154761	retained_intron		7	-1	80629707	700
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000156045	nonsense_mediated_decay		15	-1	97831469	2367
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238293	protein_coding	alternative2	4	-1	119415461	2458
ENSMUSG00000030527	protein_coding	Crtc3	ENSMUST00000152668	retained_intron		7	-1	80688877	4446
ENSMUSG00000108643	TEC	Gm44931	ENSMUST00000206056	TEC		7	-1	80603783	545
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000063642	protein_coding	alternative2	4	-1	119415521	2523
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000135651	protein_coding		15	-1	97807633	639
ENSMUSG00000005470	protein_coding	Asf1b	ENSMUST00000005607	protein_coding	principal1	8	1	83955507	1788
ENSMUSG00000022139	protein_coding	Mbnl2	ENSMUST00000227012	protein_coding	alternative1	14	1	120275706	2390
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238511	retained_intron		4	-1	119331448	1963
ENSMUSG00000022475	protein_coding	Hdac7	ENSMUST00000134258	protein_coding		15	-1	97807984	770
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000192307	protein_coding		9	1	108783796	1191
ENSMUSG00000005470	protein_coding	Asf1b	ENSMUST00000124913	processed_transcript		8	1	83955714	369
ENSMUSG00000033910	protein_coding	Gucy1a1	ENSMUST00000193924	protein_coding	principal1	3	-1	82145073	4710
ENSMUSG00000022139	protein_coding	Mbnl2	ENSMUST00000227484	retained_intron		14	1	120275707	5561
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238704	protein_coding		4	-1	119383780	1877
ENSMUSG00000028974	protein_coding	Dffa	ENSMUST00000103216	protein_coding		4	1	149104146	1835
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000050827	protein_coding	alternative2	5	-1	123749389	2344
ENSMUSG00000005470	protein_coding	Asf1b	ENSMUST00000124174	retained_intron		8	1	83965047	812
ENSMUSG00000033910	protein_coding	Gucy1a1	ENSMUST00000048976	protein_coding	principal1	3	-1	82145787	4554
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000146186	retained_intron		4	-1	119359802	894
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000124048	processed_transcript		4	-1	119359886	1979
ENSMUSG00000063052	protein_coding	Lrrc40	ENSMUST00000072080	protein_coding	principal1	3	1	158036662	4142
ENSMUSG00000022139	protein_coding	Mbnl2	ENSMUST00000167459	protein_coding	alternative1	14	1	120275721	4534
ENSMUSG00000033910	protein_coding	Gucy1a1	ENSMUST00000192289	protein_coding		3	-1	82102111	476
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000143494	protein_coding		4	-1	119359892	997
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000193560	protein_coding	alternative2	9	1	108783796	1708
ENSMUSG00000022139	protein_coding	Mbnl2	ENSMUST00000227508	retained_intron		14	1	120275730	3789
ENSMUSG00000022139	protein_coding	Mbnl2	ENSMUST00000226800	protein_coding	alternative1	14	1	120297674	3328
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238779	protein_coding		4	-1	119373753	1312
ENSMUSG00000033910	protein_coding	Gucy1a1	ENSMUST00000191942	retained_intron		3	-1	82145789	3105
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000193634	retained_intron		9	1	108783822	2820
ENSMUSG00000033910	protein_coding	Gucy1a1	ENSMUST00000194788	processed_transcript		3	-1	82145605	425
ENSMUSG00000022139	protein_coding	Mbnl2	ENSMUST00000227594	protein_coding	principal4	14	1	120306452	2334
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000195580	retained_intron		9	1	108783865	776
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000044781	protein_coding		4	-1	119383760	1464
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000192226	nonsense_mediated_decay		9	1	108783865	607
ENSMUSG00000028974	protein_coding	Dffa	ENSMUST00000030816	protein_coding	principal1	4	1	149104146	2457
ENSMUSG00000022139	protein_coding	Mbnl2	ENSMUST00000227644	processed_transcript		14	1	120306456	339
ENSMUSG00000022139	protein_coding	Mbnl2	ENSMUST00000228115	protein_coding		14	1	120379241	758
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000194875	protein_coding		9	1	108783865	748
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000131141	processed_transcript		4	-1	119359914	1128
ENSMUSG00000028974	protein_coding	Dffa	ENSMUST00000153781	processed_transcript		4	1	149107769	279
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238300	retained_intron		4	-1	119373817	1326
ENSMUSG00000072845	protein_coding	Tmprss11a	ENSMUST00000101073	protein_coding	principal1	5	-1	86468990	2657
ENSMUSG00000022139	protein_coding	Mbnl2	ENSMUST00000227153	processed_transcript		14	1	120396487	2881
ENSMUSG00000072845	protein_coding	Tmprss11a	ENSMUST00000198504	retained_intron		5	-1	86418345	3058
ENSMUSG00000022139	protein_coding	Mbnl2	ENSMUST00000088419	protein_coding	principal4	14	1	120275669	4552
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000195514	protein_coding		9	1	108795994	654
ENSMUSG00000097903	antisense	Gm26679	ENSMUST00000181685	antisense		14	-1	120388985	659
ENSMUSG00000063052	protein_coding	Lrrc40	ENSMUST00000156597	nonsense_mediated_decay		3	1	158036700	2450
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000085018	protein_coding	principal2	9	1	108795994	1846
ENSMUSG00000096338	antisense	Gm15086	ENSMUST00000143110	antisense		X	-1	149594538	573
ENSMUSG00000063052	protein_coding	Lrrc40	ENSMUST00000150525	nonsense_mediated_decay		3	1	158036702	2701
ENSMUSG00000047619	protein_coding	Ddi1	ENSMUST00000051706	protein_coding	principal1	9	-1	6269846	7114
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000084307	protein_coding		4	-1	119383760	999
ENSMUSG00000063052	protein_coding	Lrrc40	ENSMUST00000131518	nonsense_mediated_decay		3	1	158036722	732
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000194782	nonsense_mediated_decay		9	1	108796064	730
ENSMUSG00000063052	protein_coding	Lrrc40	ENSMUST00000200540	nonsense_mediated_decay		3	1	158036750	381
ENSMUSG00000085399	processed_transcript	Foxd2os	ENSMUST00000144002	processed_transcript		4	1	114909257	1015
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000148236	protein_coding		4	-1	119383767	880
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000192028	protein_coding		9	1	108796131	1199
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238721	protein_coding		4	-1	119383808	1034
ENSMUSG00000063052	protein_coding	Lrrc40	ENSMUST00000123028	nonsense_mediated_decay		3	1	158036860	569
ENSMUSG00000085399	processed_transcript	Foxd2os	ENSMUST00000123272	processed_transcript		4	1	114909257	2908
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000193055	protein_coding		9	1	108796352	487
ENSMUSG00000063052	protein_coding	Lrrc40	ENSMUST00000132530	retained_intron		3	1	158062278	1069
ENSMUSG00000032599	protein_coding	Ip6k2	ENSMUST00000193970	retained_intron		9	1	108798187	438
ENSMUSG00000063052	protein_coding	Lrrc40	ENSMUST00000199290	retained_intron		3	1	158062679	421
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000127149	protein_coding		4	-1	119383834	967
ENSMUSG00000081972	processed_pseudogene	Gm16397	ENSMUST00000122201	processed_pseudogene		X	1	134731571	494
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000152879	protein_coding		4	-1	119383834	841
ENSMUSG00000044518	protein_coding	Foxe3	ENSMUST00000050940	protein_coding	principal1	4	-1	114926013	867
ENSMUSG00000033629	protein_coding	Hacd3	ENSMUST00000036615	protein_coding	principal1	9	-1	65021693	2709
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238485	protein_coding		4	-1	119383894	1043
ENSMUSG00000102207	TEC	Gm10344	ENSMUST00000193498	TEC		X	-1	134746913	1419
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000159906	protein_coding		1	1	6206197	656
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238422	protein_coding		4	-1	119383688	437
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000114621	protein_coding		X	1	71215028	3257
ENSMUSG00000090231	protein_coding	Cfb	ENSMUST00000128767	protein_coding	alternative2	17	-1	34862518	2751
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000127474	protein_coding		4	-1	119383767	748
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238719	protein_coding		4	-1	119383741	764
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238673	protein_coding		4	-1	119383834	800
ENSMUSG00000099016	antisense	Gm27227	ENSMUST00000183413	antisense		9	-1	80265450	633
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000135997	retained_intron		4	-1	119393277	2780
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238287	protein_coding		4	-1	119415502	1789
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000160871	protein_coding		1	1	6206227	690
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238609	protein_coding		4	-1	119415479	1034
ENSMUSG00000028637	protein_coding	Ccdc30	ENSMUST00000238559	processed_transcript		4	-1	119415514	761
ENSMUSG00000083836	processed_pseudogene	Ldha-ps2	ENSMUST00000118722	processed_pseudogene		4	-1	119335445	1057
ENSMUSG00000090231	protein_coding	Cfb	ENSMUST00000154526	protein_coding		17	-1	34862173	2397
ENSMUSG00000118403	antisense	Gm50484	ENSMUST00000238574	antisense		4	1	119393500	855
ENSMUSG00000090231	protein_coding	Cfb	ENSMUST00000153400	protein_coding		17	-1	34858142	887
ENSMUSG00000090231	protein_coding	Cfb	ENSMUST00000176332	protein_coding		17	-1	34859310	905
ENSMUSG00000080728	processed_pseudogene	Gm13616	ENSMUST00000120600	processed_pseudogene		2	-1	66145875	222
ENSMUSG00000090231	protein_coding	Cfb	ENSMUST00000133127	nonsense_mediated_decay		17	-1	34859041	655
ENSMUSG00000100197	lincRNA	Gm28638	ENSMUST00000188152	lincRNA		2	1	66125317	288
ENSMUSG00000099810	lincRNA	Gm29509	ENSMUST00000185716	lincRNA		6	1	117899201	321
ENSMUSG00000094378	protein_coding	Gm15097	ENSMUST00000101180	protein_coding	principal2	X	1	149784473	2029
ENSMUSG00000094378	protein_coding	Gm15097	ENSMUST00000112741	protein_coding	alternative2	X	1	149790191	1953
ENSMUSG00000032598	protein_coding	Nckipsd	ENSMUST00000035218	protein_coding	principal1	9	1	108808368	3360
ENSMUSG00000024206	protein_coding	Rfx2	ENSMUST00000086801	protein_coding	principal3	17	-1	56831013	3283
ENSMUSG00000094964	unprocessed_pseudogene	Gm15101	ENSMUST00000178818	unprocessed_pseudogene		X	1	149658834	1502
ENSMUSG00000090231	protein_coding	Cfb	ENSMUST00000025229	protein_coding	principal2	17	-1	34862514	2737
ENSMUSG00000032598	protein_coding	Nckipsd	ENSMUST00000195323	protein_coding		9	1	108808373	467
ENSMUSG00000032598	protein_coding	Nckipsd	ENSMUST00000194819	protein_coding		9	1	108808421	367
ENSMUSG00000090231	protein_coding	Cfb	ENSMUST00000176203	protein_coding		17	-1	34862514	2733
ENSMUSG00000024206	protein_coding	Rfx2	ENSMUST00000002444	protein_coding	alternative2	17	-1	56831008	3350
ENSMUSG00000032598	protein_coding	Nckipsd	ENSMUST00000192678	protein_coding		9	1	108811925	178
ENSMUSG00000061584	protein_coding	Lyg2	ENSMUST00000078307	protein_coding	principal1	1	-1	37916493	2564
ENSMUSG00000049823	protein_coding	Zbtb12	ENSMUST00000173093	protein_coding		17	1	34879483	387
ENSMUSG00000032598	protein_coding	Nckipsd	ENSMUST00000194413	retained_intron		9	1	108813428	754
ENSMUSG00000002983	protein_coding	Relb	ENSMUST00000094762	protein_coding	principal3	7	-1	19629438	2209
ENSMUSG00000024206	protein_coding	Rfx2	ENSMUST00000233624	retained_intron		17	-1	56783704	580
ENSMUSG00000002983	protein_coding	Relb	ENSMUST00000049912	protein_coding	alternative2	7	-1	19629438	2200
ENSMUSG00000024206	protein_coding	Rfx2	ENSMUST00000233000	protein_coding		17	-1	56830971	812
ENSMUSG00000032598	protein_coding	Nckipsd	ENSMUST00000192180	retained_intron		9	1	108814836	1089
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000134859	retained_intron		X	1	71215031	3412
ENSMUSG00000024206	protein_coding	Rfx2	ENSMUST00000233643	retained_intron		17	-1	56830939	4141
ENSMUSG00000049823	protein_coding	Zbtb12	ENSMUST00000052778	protein_coding	principal1	17	1	34894559	1858
ENSMUSG00000103785	processed_transcript	Gm35025	ENSMUST00000193114	lincRNA		9	-1	108825098	455
ENSMUSG00000103785	processed_transcript	Gm35025	ENSMUST00000193519	lincRNA		9	-1	108824819	634
ENSMUSG00000072923	protein_coding	Gm10439	ENSMUST00000101181	protein_coding	principal1	X	1	149594570	1977
ENSMUSG00000103785	processed_transcript	Gm35025	ENSMUST00000192885	TEC		9	-1	108824861	695
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000126208	retained_intron		X	1	71215036	2339
ENSMUSG00000084327	processed_pseudogene	Gm14531	ENSMUST00000120845	processed_pseudogene		X	1	19726491	285
ENSMUSG00000102244	TEC	Gm37714	ENSMUST00000194742	TEC		9	1	108825349	342
ENSMUSG00000026085	protein_coding	Lyg1	ENSMUST00000144184	processed_transcript		1	-1	37948999	486
ENSMUSG00000095561	processed_pseudogene	Gm8383	ENSMUST00000121179	processed_pseudogene		X	1	149716151	1770
ENSMUSG00000081735	processed_pseudogene	Gm14530	ENSMUST00000122391	processed_pseudogene		X	-1	19763265	333
ENSMUSG00000084186	processed_pseudogene	Rpl36-ps10	ENSMUST00000117431	processed_pseudogene		X	1	19870824	216
ENSMUSG00000079451	protein_coding	Tmprss11g	ENSMUST00000134179	protein_coding	principal2	5	-1	86518600	2873
ENSMUSG00000026085	protein_coding	Lyg1	ENSMUST00000027254	protein_coding	alternative2	1	-1	37957759	800
ENSMUSG00000032006	protein_coding	Pdgfd	ENSMUST00000058692	protein_coding	alternative1	9	1	6168584	3131
ENSMUSG00000079451	protein_coding	Tmprss11g	ENSMUST00000140095	protein_coding	alternative2	5	-1	86518571	2314
ENSMUSG00000051615	protein_coding	Rap2a	ENSMUST00000062117	protein_coding	principal1	14	1	120478444	4191
ENSMUSG00000079451	protein_coding	Tmprss11g	ENSMUST00000199703	retained_intron		5	-1	86490639	2285
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000033700	protein_coding	principal1	X	1	71215039	3316
ENSMUSG00000115648	lincRNA	Gm49008	ENSMUST00000226920	lincRNA		14	1	120632962	272
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000003726	protein_coding	alternative2	17	-1	32284097	5957
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000156452	retained_intron		X	1	71215059	4111
ENSMUSG00000026085	protein_coding	Lyg1	ENSMUST00000114894	protein_coding	principal2	1	-1	37957759	798
ENSMUSG00000115630	processed_pseudogene	Rpl19-ps5	ENSMUST00000226406	processed_pseudogene		14	1	120713078	589
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182948	processed_transcript		5	-1	123742833	1609
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000114617	protein_coding	principal1	X	1	71215082	3338
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182955	protein_coding	alternative2	5	-1	123749371	1685
ENSMUSG00000087374	antisense	Gm15457	ENSMUST00000129513	antisense		1	1	37933596	3990
ENSMUSG00000032006	protein_coding	Pdgfd	ENSMUST00000168039	protein_coding	principal2	9	1	6168612	1795
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000151415	retained_intron		X	1	71215085	2042
ENSMUSG00000090284	lincRNA	Gm17613	ENSMUST00000138893	lincRNA		14	1	120749185	669
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000152810	retained_intron		X	1	71215085	2353
ENSMUSG00000032006	protein_coding	Pdgfd	ENSMUST00000214892	protein_coding		9	1	6168661	2862
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000129722	retained_intron		X	1	71301369	3469
ENSMUSG00000115835	lincRNA	Gm41253	ENSMUST00000227862	lincRNA		14	-1	120806284	383
ENSMUSG00000109329	lincRNA	Gm33926	ENSMUST00000208755	lincRNA		7	-1	67443933	357
ENSMUSG00000115163	processed_pseudogene	Gm18076	ENSMUST00000228954	processed_pseudogene		14	-1	120815740	614
ENSMUSG00000115028	processed_pseudogene	Gm9391	ENSMUST00000228417	processed_pseudogene		14	1	120827158	389
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000121285	protein_coding	principal3	17	-1	32284109	5922
ENSMUSG00000002983	protein_coding	Relb	ENSMUST00000148040	retained_intron		7	-1	19629438	3273
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000230565	retained_intron		17	-1	32198821	747
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000229020	retained_intron		17	-1	32198579	438
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000230858	protein_coding		17	-1	32201008	507
ENSMUSG00000002983	protein_coding	Relb	ENSMUST00000137615	retained_intron		7	-1	19629438	3166
ENSMUSG00000002983	protein_coding	Relb	ENSMUST00000131759	retained_intron		7	-1	19629438	3210
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000120276	protein_coding		17	-1	32284109	4486
ENSMUSG00000002983	protein_coding	Relb	ENSMUST00000208087	nonsense_mediated_decay		7	-1	19629248	1525
ENSMUSG00000002983	protein_coding	Relb	ENSMUST00000130543	processed_transcript		7	-1	19628784	784
ENSMUSG00000029501	protein_coding	Ankle2	ENSMUST00000197188	protein_coding	principal3	5	1	110231004	4077
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000237692	protein_coding		17	-1	32284133	1823
ENSMUSG00000002983	protein_coding	Relb	ENSMUST00000153309	protein_coding		7	-1	19628473	931
ENSMUSG00000029501	protein_coding	Ankle2	ENSMUST00000031474	protein_coding	alternative2	5	1	110231041	5215
ENSMUSG00000002983	protein_coding	Relb	ENSMUST00000141586	protein_coding		7	-1	19628434	727
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000127893	protein_coding		17	-1	32284722	1910
ENSMUSG00000029501	protein_coding	Ankle2	ENSMUST00000196865	retained_intron		5	1	110231163	1373
ENSMUSG00000029501	protein_coding	Ankle2	ENSMUST00000197101	retained_intron		5	1	110237521	647
ENSMUSG00000085524	antisense	Gm14224	ENSMUST00000147187	antisense		2	-1	156455651	864
ENSMUSG00000029501	protein_coding	Ankle2	ENSMUST00000196821	processed_transcript		5	1	110250740	534
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000125899	nonsense_mediated_decay		17	-1	32284677	2118
ENSMUSG00000086872	antisense	Gm14225	ENSMUST00000142310	antisense		2	-1	156447608	539
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000235598	nonsense_mediated_decay		17	-1	32284109	1757
ENSMUSG00000026399	protein_coding	Cd55	ENSMUST00000027650	protein_coding	principal1	1	-1	130462744	2533
ENSMUSG00000037646	protein_coding	Vps13b	ENSMUST00000048646	protein_coding	principal1	15	1	35371160	13757
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000237008	protein_coding		17	-1	32272365	731
ENSMUSG00000042087	TEC	4933440N22Rik	ENSMUST00000204444	TEC		6	-1	117907759	1952
ENSMUSG00000026399	protein_coding	Cd55	ENSMUST00000122830	retained_intron		1	-1	130448849	769
ENSMUSG00000024002	protein_coding	Brd4	ENSMUST00000230982	processed_transcript		17	-1	32284090	618
ENSMUSG00000042087	TEC	4933440N22Rik	ENSMUST00000035534	TEC		6	-1	117907760	651
ENSMUSG00000037646	protein_coding	Vps13b	ENSMUST00000227455	protein_coding		15	1	35371526	339
ENSMUSG00000026399	protein_coding	Cd55	ENSMUST00000140400	protein_coding		1	-1	130452416	1240
ENSMUSG00000031991	protein_coding	Spata19	ENSMUST00000214158	protein_coding		9	1	27396800	627
ENSMUSG00000002983	protein_coding	Relb	ENSMUST00000098754	protein_coding	alternative2	7	-1	19629438	2203
ENSMUSG00000097217	bidirectional_promoter_lncRNA	Gm26549	ENSMUST00000181112	bidirectional_promoter_lncRNA		17	1	32284789	1207
ENSMUSG00000026399	protein_coding	Cd55	ENSMUST00000140725	retained_intron		1	-1	130462731	3133
ENSMUSG00000116414	processed_pseudogene	Gm4432	ENSMUST00000230961	processed_pseudogene		17	1	32242163	345
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000025391	protein_coding		X	1	71215006	3286
ENSMUSG00000026399	protein_coding	Cd55	ENSMUST00000133057	processed_transcript		1	-1	130462451	721
ENSMUSG00000037646	protein_coding	Vps13b	ENSMUST00000227309	retained_intron		15	1	35371546	1539
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000171933	protein_coding	principal1	X	1	71210767	3488
ENSMUSG00000031337	protein_coding	Mtm1	ENSMUST00000061970	protein_coding	principal1	X	1	71215006	3379
ENSMUSG00000085526	antisense	Gm16083	ENSMUST00000125681	antisense		1	1	130462576	2547
ENSMUSG00000102139	TEC	Gm37109	ENSMUST00000195475	TEC		1	1	130467972	2254
ENSMUSG00000037646	protein_coding	Vps13b	ENSMUST00000228338	retained_intron		15	1	35371549	2076
ENSMUSG00000103751	TEC	Gm37283	ENSMUST00000193111	TEC		1	1	130473743	1571
ENSMUSG00000029501	protein_coding	Ankle2	ENSMUST00000086674	protein_coding	alternative2	5	1	110231004	5025
ENSMUSG00000031991	protein_coding	Spata19	ENSMUST00000214240	retained_intron		9	1	27396821	998
ENSMUSG00000104970	antisense	Gm43137	ENSMUST00000198052	antisense		5	-1	110231201	594
ENSMUSG00000037646	protein_coding	Vps13b	ENSMUST00000226579	processed_transcript		15	1	35371566	4568
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000047815	protein_coding	principal3	2	1	167421712	4521
ENSMUSG00000037646	protein_coding	Vps13b	ENSMUST00000227567	retained_intron		15	1	35834215	2634
ENSMUSG00000037646	protein_coding	Vps13b	ENSMUST00000228738	retained_intron		15	1	35871722	4254
ENSMUSG00000020679	protein_coding	Hnf1b	ENSMUST00000021016	protein_coding	principal3	11	1	83850855	2759
ENSMUSG00000115829	antisense	Gm48960	ENSMUST00000228236	antisense		15	-1	35373147	1426
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000150326	retained_intron		2	1	167421723	2059
ENSMUSG00000024486	protein_coding	Hbegf	ENSMUST00000025363	protein_coding	principal1	18	-1	36515805	2375
ENSMUSG00000115340	TEC	Gm48965	ENSMUST00000226372	TEC		15	1	35855394	2398
ENSMUSG00000024486	protein_coding	Hbegf	ENSMUST00000237621	retained_intron		18	-1	36515367	446
ENSMUSG00000005469	protein_coding	Prkaca	ENSMUST00000005606	protein_coding	principal3	8	1	83972993	2276
ENSMUSG00000115837	TEC	9130002K18Rik	ENSMUST00000228829	TEC		15	1	35787154	3126
ENSMUSG00000024486	protein_coding	Hbegf	ENSMUST00000236520	retained_intron		18	-1	36515775	2890
ENSMUSG00000115040	processed_pseudogene	Gm18994	ENSMUST00000228224	processed_pseudogene		15	1	35733604	1019
ENSMUSG00000005469	protein_coding	Prkaca	ENSMUST00000211558	protein_coding	alternative1	8	1	83976883	1399
ENSMUSG00000118214	lincRNA	Gm50199	ENSMUST00000235275	lincRNA		18	1	36521883	474
ENSMUSG00000115793	TEC	Gm48961	ENSMUST00000228830	TEC		15	1	35860510	2859
ENSMUSG00000068745	protein_coding	Mybphl	ENSMUST00000090563	protein_coding	principal1	3	1	108364911	1276
ENSMUSG00000115144	TEC	Gm7968	ENSMUST00000228376	TEC		15	1	35589314	2325
ENSMUSG00000020679	protein_coding	Hnf1b	ENSMUST00000108114	protein_coding	alternative1	11	1	83850874	2659
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000124139	retained_intron		2	1	167421737	1476
ENSMUSG00000031991	protein_coding	Spata19	ENSMUST00000034473	protein_coding	principal2	9	1	27396821	697
ENSMUSG00000115314	TEC	Gm48966	ENSMUST00000227179	TEC		15	1	35568243	1643
ENSMUSG00000020679	protein_coding	Hnf1b	ENSMUST00000146786	protein_coding		11	1	83852242	671
ENSMUSG00000031991	protein_coding	Spata19	ENSMUST00000215658	processed_transcript		9	1	27397210	678
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182309	protein_coding	principal4	5	-1	123749414	1595
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000109218	protein_coding	alternative2	2	1	167421721	2055
ENSMUSG00000031991	protein_coding	Spata19	ENSMUST00000214287	protein_coding	alternative2	9	1	27397226	642
ENSMUSG00000074281	processed_transcript	Gm12522	ENSMUST00000142833	processed_transcript		3	-1	108383741	2439
ENSMUSG00000020679	protein_coding	Hnf1b	ENSMUST00000108113	protein_coding		11	1	83852960	2376
ENSMUSG00000028837	protein_coding	Psmb2	ENSMUST00000030642	protein_coding	principal1	4	1	126677630	859
ENSMUSG00000014313	protein_coding	Cox6c	ENSMUST00000155638	nonsense_mediated_decay		15	-1	35935331	648
ENSMUSG00000031991	protein_coding	Spata19	ENSMUST00000215326	retained_intron		9	1	27397525	766
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182489	protein_coding	alternative2	5	-1	123749380	1665
ENSMUSG00000028837	protein_coding	Psmb2	ENSMUST00000130737	processed_transcript		4	1	126677679	547
ENSMUSG00000080998	processed_pseudogene	Gm5384	ENSMUST00000120313	processed_pseudogene		X	1	19893657	463
ENSMUSG00000075203	protein_coding	Olfr1040	ENSMUST00000099909	protein_coding	principal1	2	-1	86146732	942
ENSMUSG00000028837	protein_coding	Psmb2	ENSMUST00000150372	processed_transcript		4	1	126677704	708
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182556	nonsense_mediated_decay		5	-1	123742858	1291
ENSMUSG00000114823	processed_transcript	Gm31630	ENSMUST00000225872	processed_transcript		13	1	92898286	382
ENSMUSG00000082561	processed_pseudogene	Gm15580	ENSMUST00000121587	processed_pseudogene		7	1	143596439	556
ENSMUSG00000111802	unprocessed_pseudogene	Olfr1041-ps1	ENSMUST00000215884	unprocessed_pseudogene		2	-1	86149613	271
ENSMUSG00000025465	protein_coding	Echs1	ENSMUST00000026538	protein_coding	principal1	7	-1	140116476	1557
ENSMUSG00000025465	protein_coding	Echs1	ENSMUST00000155647	retained_intron		7	-1	140116389	2474
ENSMUSG00000037347	protein_coding	Chst7	ENSMUST00000044138	protein_coding	principal1	X	1	20059560	2206
ENSMUSG00000025465	protein_coding	Echs1	ENSMUST00000151505	retained_intron		7	-1	140116415	3890
ENSMUSG00000025465	protein_coding	Echs1	ENSMUST00000147643	retained_intron		7	-1	140116415	4088
ENSMUSG00000023979	protein_coding	Guca1b	ENSMUST00000024774	protein_coding	principal1	17	1	47385393	1668
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000027040	protein_coding	principal1	1	1	6214645	7607
ENSMUSG00000025465	protein_coding	Echs1	ENSMUST00000125337	processed_transcript		7	-1	140116407	373
ENSMUSG00000014313	protein_coding	Cox6c	ENSMUST00000014457	protein_coding	principal1	15	-1	35938246	503
ENSMUSG00000025465	protein_coding	Echs1	ENSMUST00000211120	retained_intron		7	-1	140116422	3128
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000162210	retained_intron		1	1	6214663	1151
ENSMUSG00000014313	protein_coding	Cox6c	ENSMUST00000153512	protein_coding	principal1	15	-1	35937645	738
ENSMUSG00000023979	protein_coding	Guca1b	ENSMUST00000145462	protein_coding		17	1	47385404	1556
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000160062	protein_coding		1	1	6215008	520
ENSMUSG00000114968	antisense	A630019I02Rik	ENSMUST00000224009	antisense		13	1	93094833	2990
ENSMUSG00000014313	protein_coding	Cox6c	ENSMUST00000127999	retained_intron		15	-1	35938207	3038
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000162795	protein_coding		1	1	6228002	2712
ENSMUSG00000114382	antisense	Gm4814	ENSMUST00000224146	antisense		13	1	93073304	909
ENSMUSG00000014313	protein_coding	Cox6c	ENSMUST00000156915	protein_coding	principal1	15	-1	35938009	606
ENSMUSG00000114382	antisense	Gm4814	ENSMUST00000225665	antisense		13	1	93073379	556
ENSMUSG00000025464	protein_coding	Paox	ENSMUST00000211757	protein_coding		7	1	140115799	628
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000161327	protein_coding		1	1	6234279	5707
ENSMUSG00000014313	protein_coding	Cox6c	ENSMUST00000227231	processed_transcript		15	-1	35937169	260
ENSMUSG00000025464	protein_coding	Paox	ENSMUST00000209908	nonsense_mediated_decay		7	1	140115811	560
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000159802	retained_intron		1	1	6240970	4136
ENSMUSG00000025464	protein_coding	Paox	ENSMUST00000210240	processed_transcript		7	1	140115822	476
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000162257	nonsense_mediated_decay		1	1	6249088	2204
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000159206	processed_transcript		1	1	6249977	519
ENSMUSG00000028971	protein_coding	Cort	ENSMUST00000030815	protein_coding	principal1	4	-1	149126763	677
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000159661	retained_intron		1	1	6250095	875
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000161183	retained_intron		1	1	6260785	332
ENSMUSG00000047419	protein_coding	Cmya5	ENSMUST00000062122	protein_coding	principal1	13	-1	93144724	11850
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000159349	retained_intron		1	1	6262903	633
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000159530	protein_coding		1	1	6262933	898
ENSMUSG00000042079	protein_coding	Hnrnpf	ENSMUST00000177743	protein_coding		6	1	117900324	515
ENSMUSG00000027484	protein_coding	Bpifa5	ENSMUST00000028986	protein_coding	principal1	2	1	154162607	1089
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000162418	retained_intron		1	1	6265606	2150
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182584	nonsense_mediated_decay		5	-1	123743645	1377
ENSMUSG00000025907	protein_coding	Rb1cc1	ENSMUST00000159656	retained_intron		1	1	6270678	1599
ENSMUSG00000042079	protein_coding	Hnrnpf	ENSMUST00000179224	protein_coding		6	1	117906790	391
ENSMUSG00000025464	protein_coding	Paox	ENSMUST00000026537	protein_coding	principal1	7	1	140125657	4655
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182861	nonsense_mediated_decay		5	-1	123743645	1302
ENSMUSG00000090031	antisense	4732440D04Rik	ENSMUST00000191825	antisense		1	-1	6215293	5428
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182985	retained_intron		5	-1	123733694	572
ENSMUSG00000025464	protein_coding	Paox	ENSMUST00000097967	protein_coding		7	1	140125708	1024
ENSMUSG00000041815	protein_coding	Poldip3	ENSMUST00000058793	protein_coding	principal3	15	-1	83149384	3299
ENSMUSG00000090031	antisense	4732440D04Rik	ENSMUST00000159618	antisense		1	-1	6214590	413
ENSMUSG00000090031	antisense	4732440D04Rik	ENSMUST00000097832	antisense		1	-1	6215292	681
ENSMUSG00000041815	protein_coding	Poldip3	ENSMUST00000100375	protein_coding	alternative1	15	-1	83149331	3157
ENSMUSG00000041815	protein_coding	Poldip3	ENSMUST00000129372	protein_coding		15	-1	83149301	655
ENSMUSG00000041815	protein_coding	Poldip3	ENSMUST00000135013	retained_intron		15	-1	83135911	680
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000183147	protein_coding		5	-1	123749386	1312
ENSMUSG00000041815	protein_coding	Poldip3	ENSMUST00000149802	retained_intron		15	-1	83149329	2393
ENSMUSG00000042477	protein_coding	Tfap2e	ENSMUST00000048194	protein_coding	principal1	4	-1	126736240	2085
ENSMUSG00000041815	protein_coding	Poldip3	ENSMUST00000150926	retained_intron		15	-1	83149336	837
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182015	nonsense_mediated_decay		5	-1	123749381	942
ENSMUSG00000042079	protein_coding	Hnrnpf	ENSMUST00000035493	protein_coding	principal1	6	1	117906795	2147
ENSMUSG00000042079	protein_coding	Hnrnpf	ENSMUST00000177918	protein_coding		6	1	117906827	538
ENSMUSG00000082937	unprocessed_pseudogene	Gm15095	ENSMUST00000118996	unprocessed_pseudogene		X	1	149848723	1430
ENSMUSG00000023473	protein_coding	Celsr3	ENSMUST00000024238	protein_coding	alternative2	9	1	108826320	11547
ENSMUSG00000042079	protein_coding	Hnrnpf	ENSMUST00000163168	protein_coding	principal1	6	1	117906849	2401
ENSMUSG00000084395	unprocessed_pseudogene	Gm15087	ENSMUST00000117465	unprocessed_pseudogene		X	1	149859742	1172
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000181980	processed_transcript		5	-1	123749382	1252
ENSMUSG00000023473	protein_coding	Celsr3	ENSMUST00000213524	protein_coding	principal5	9	1	108826320	11571
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182744	retained_intron		5	-1	123745569	2614
ENSMUSG00000042079	protein_coding	Hnrnpf	ENSMUST00000179478	protein_coding		6	1	117916981	956
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182968	retained_intron		5	-1	123741748	3074
ENSMUSG00000023473	protein_coding	Celsr3	ENSMUST00000192235	protein_coding		9	1	108831740	722
ENSMUSG00000053388	protein_coding	Trim50	ENSMUST00000111180	protein_coding	alternative2	5	1	135353295	1456
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182411	nonsense_mediated_decay		5	-1	123749371	765
ENSMUSG00000042079	protein_coding	Hnrnpf	ENSMUST00000177570	protein_coding		6	1	117917303	1104
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182241	nonsense_mediated_decay		5	-1	123749412	815
ENSMUSG00000023473	protein_coding	Celsr3	ENSMUST00000193726	retained_intron		9	1	108834472	767
ENSMUSG00000042079	protein_coding	Hnrnpf	ENSMUST00000180341	protein_coding	principal1	6	1	117923701	1922
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182093	nonsense_mediated_decay		5	-1	123749369	687
ENSMUSG00000023473	protein_coding	Celsr3	ENSMUST00000195255	retained_intron		9	1	108842609	524
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182809	processed_transcript		5	-1	123749367	610
ENSMUSG00000023473	protein_coding	Celsr3	ENSMUST00000195857	retained_intron		9	1	108843235	443
ENSMUSG00000023473	protein_coding	Celsr3	ENSMUST00000194079	protein_coding		9	1	108843253	1418
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000183253	retained_intron		5	-1	123749381	1980
ENSMUSG00000053388	protein_coding	Trim50	ENSMUST00000065785	protein_coding	principal2	5	1	135353296	1803
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182612	retained_intron		5	-1	123749381	2071
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000182542	retained_intron		5	-1	123745230	386
ENSMUSG00000048003	protein_coding	Catsper4	ENSMUST00000055892	protein_coding	principal1	4	-1	134227383	1725
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000131956	processed_transcript		2	1	167421732	4852
ENSMUSG00000106815	TEC	Gm43658	ENSMUST00000202348	TEC		5	-1	76301775	4176
ENSMUSG00000042079	protein_coding	Hnrnpf	ENSMUST00000167182	protein_coding	principal1	6	1	117900340	2271
ENSMUSG00000047150	protein_coding	1700001C19Rik	ENSMUST00000061885	protein_coding	principal3	17	-1	47437375	1622
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000139673	processed_transcript		2	1	167421742	4241
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000057795	protein_coding	alternative2	5	-1	123749412	2270
ENSMUSG00000106831	processed_pseudogene	Ube2n-ps1	ENSMUST00000201768	processed_pseudogene		5	-1	76233070	459
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000148454	processed_transcript		2	1	167451155	3733
ENSMUSG00000048003	protein_coding	Catsper4	ENSMUST00000105878	protein_coding		4	-1	134227372	632
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000135353	retained_intron		2	1	167421730	1884
ENSMUSG00000048003	protein_coding	Catsper4	ENSMUST00000130984	processed_transcript		4	-1	134227350	362
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000141400	processed_transcript		2	1	167421738	809
ENSMUSG00000048003	protein_coding	Catsper4	ENSMUST00000169381	protein_coding		4	-1	134227383	1506
ENSMUSG00000029422	protein_coding	Rsrc2	ENSMUST00000111515	protein_coding		5	-1	123749412	4223
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000149607	processed_transcript		2	1	167424119	727
ENSMUSG00000047150	protein_coding	1700001C19Rik	ENSMUST00000073143	protein_coding	alternative2	17	-1	47421880	614
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000129245	lincRNA		12	1	109541001	1498
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000125855	processed_transcript		2	1	167450966	787
ENSMUSG00000042079	protein_coding	Hnrnpf	ENSMUST00000180020	protein_coding	principal1	6	1	117917294	2280
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000155585	processed_transcript		2	1	167451055	733
ENSMUSG00000047150	protein_coding	1700001C19Rik	ENSMUST00000125507	processed_transcript		17	-1	47414711	691
ENSMUSG00000097383	bidirectional_promoter_lncRNA	1500026H17Rik	ENSMUST00000181598	bidirectional_promoter_lncRNA		10	1	89686371	3027
ENSMUSG00000107608	TEC	Gm43863	ENSMUST00000203822	TEC		6	-1	117917722	1192
ENSMUSG00000075202	protein_coding	Olfr1042	ENSMUST00000099908	protein_coding	principal1	2	-1	86161832	4119
ENSMUSG00000047150	protein_coding	1700001C19Rik	ENSMUST00000160678	processed_transcript		17	-1	47437376	654
ENSMUSG00000039463	protein_coding	Slc9a8	ENSMUST00000073873	protein_coding	alternative2	2	1	167421721	4429
ENSMUSG00000075202	protein_coding	Olfr1042	ENSMUST00000215624	protein_coding	principal1	2	-1	86161838	5096
ENSMUSG00000023982	protein_coding	Guca1a	ENSMUST00000059348	protein_coding	principal1	17	-1	47400584	873
ENSMUSG00000031983	protein_coding	2310022B05Rik	ENSMUST00000034464	protein_coding	principal1	8	-1	124663369	3307
ENSMUSG00000023259	protein_coding	Slc26a6	ENSMUST00000193825	processed_transcript		9	1	108853283	349
ENSMUSG00000083019	transcribed_processed_pseudogene	Gm6222	ENSMUST00000182143	processed_transcript		X	-1	103763545	629
ENSMUSG00000083019	transcribed_processed_pseudogene	Gm6222	ENSMUST00000120787	transcribed_processed_pseudogene		X	-1	103763416	396
ENSMUSG00000083605	processed_pseudogene	Gm14893	ENSMUST00000117904	processed_pseudogene		X	1	103778693	282
ENSMUSG00000034382	protein_coding	AI661453	ENSMUST00000037701	protein_coding	alternative2	17	1	47436615	1410
ENSMUSG00000075201	protein_coding	Olfr1043	ENSMUST00000213949	protein_coding	principal1	2	-1	86167522	1778
ENSMUSG00000104064	TEC	Gm37956	ENSMUST00000195208	TEC		X	-1	103773655	2010
ENSMUSG00000075201	protein_coding	Olfr1043	ENSMUST00000213886	protein_coding	principal1	2	-1	86167522	1675
ENSMUSG00000049871	protein_coding	Nlrc3	ENSMUST00000180200	protein_coding		16	-1	3976545	3842
ENSMUSG00000075201	protein_coding	Olfr1043	ENSMUST00000216028	protein_coding	principal1	2	-1	86167522	1824
ENSMUSG00000075201	protein_coding	Olfr1043	ENSMUST00000099907	protein_coding	principal1	2	-1	86162947	945
ENSMUSG00000034382	protein_coding	AI661453	ENSMUST00000150819	protein_coding	principal2	17	1	47436805	4866
ENSMUSG00000020780	protein_coding	Srp68	ENSMUST00000021133	protein_coding	principal1	11	-1	116274217	2526
ENSMUSG00000049871	protein_coding	Nlrc3	ENSMUST00000177551	protein_coding	principal1	16	-1	3976632	5403
ENSMUSG00000118471	protein_coding	Gm50461	ENSMUST00000238764	nonsense_mediated_decay	principal1	17	-1	47421880	1004
ENSMUSG00000020780	protein_coding	Srp68	ENSMUST00000106425	protein_coding		11	-1	116274135	2330
ENSMUSG00000075200	protein_coding	Olfr1044	ENSMUST00000215739	processed_transcript		2	-1	86177814	2111
ENSMUSG00000049871	protein_coding	Nlrc3	ENSMUST00000229884	protein_coding		16	-1	3965640	3600
ENSMUSG00000020780	protein_coding	Srp68	ENSMUST00000127205	processed_transcript		11	-1	116274217	1979
ENSMUSG00000033965	protein_coding	Slc16a2	ENSMUST00000042664	protein_coding	principal1	X	-1	103821983	4152
ENSMUSG00000075200	protein_coding	Olfr1044	ENSMUST00000215171	protein_coding	principal1	2	-1	86177820	3266
ENSMUSG00000096361	processed_pseudogene	Gm5814	ENSMUST00000177586	processed_pseudogene		17	1	47410363	375
ENSMUSG00000020780	protein_coding	Srp68	ENSMUST00000128808	processed_transcript		11	-1	116261338	703
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000136896	retained_intron		6	-1	148789991	6056
ENSMUSG00000033965	protein_coding	Slc16a2	ENSMUST00000171837	retained_intron		X	-1	103706454	549
ENSMUSG00000075200	protein_coding	Olfr1044	ENSMUST00000215285	processed_transcript		2	-1	86171830	2759
ENSMUSG00000033965	protein_coding	Slc16a2	ENSMUST00000148684	processed_transcript		X	-1	103734189	660
ENSMUSG00000075200	protein_coding	Olfr1044	ENSMUST00000099906	protein_coding	principal1	2	-1	86171815	945
ENSMUSG00000098203	processed_pseudogene	Gm9568	ENSMUST00000182514	processed_pseudogene		15	-1	75856228	1008
ENSMUSG00000049871	protein_coding	Nlrc3	ENSMUST00000096308	retained_intron		16	-1	3976632	4351
ENSMUSG00000049871	protein_coding	Nlrc3	ENSMUST00000163478	retained_intron		16	-1	3964207	2719
ENSMUSG00000032324	protein_coding	Tspan3	ENSMUST00000214970	processed_transcript		9	-1	56160789	1681
ENSMUSG00000048764	protein_coding	Tmprss11f	ENSMUST00000116553	protein_coding	principal1	5	-1	86632424	3605
ENSMUSG00000017404	protein_coding	Rpl19	ENSMUST00000092425	protein_coding	alternative1	11	1	98026710	737
ENSMUSG00000048764	protein_coding	Tmprss11f	ENSMUST00000161625	processed_transcript		5	-1	86632424	3123
ENSMUSG00000023259	protein_coding	Slc26a6	ENSMUST00000192507	protein_coding	principal5	9	1	108853348	4362
ENSMUSG00000048764	protein_coding	Tmprss11f	ENSMUST00000173259	retained_intron		5	-1	86632383	402
ENSMUSG00000017404	protein_coding	Rpl19	ENSMUST00000017548	protein_coding	principal3	11	1	98026924	751
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000048418	protein_coding	principal1	6	-1	148831467	5360
ENSMUSG00000017404	protein_coding	Rpl19	ENSMUST00000134435	retained_intron		11	1	98026957	359
ENSMUSG00000031782	protein_coding	Coq9	ENSMUST00000034234	protein_coding	principal1	8	1	94838321	1789
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000239062	protein_coding		6	-1	148799832	3641
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000204424	retained_intron		6	-1	148775608	4916
ENSMUSG00000031782	protein_coding	Coq9	ENSMUST00000159871	protein_coding		8	1	94838403	831
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000204016	retained_intron		6	-1	148778699	2413
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000147955	retained_intron		6	-1	148782642	553
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000123842	retained_intron		6	-1	148798801	829
ENSMUSG00000031782	protein_coding	Coq9	ENSMUST00000159424	retained_intron		8	1	94838405	726
ENSMUSG00000031782	protein_coding	Coq9	ENSMUST00000160998	retained_intron		8	1	94838415	423
ENSMUSG00000031782	protein_coding	Coq9	ENSMUST00000159638	retained_intron		8	1	94838429	810
ENSMUSG00000031782	protein_coding	Coq9	ENSMUST00000160364	retained_intron		8	1	94850125	546
ENSMUSG00000032324	protein_coding	Tspan3	ENSMUST00000034876	protein_coding	principal1	9	-1	56161057	1716
ENSMUSG00000031782	protein_coding	Coq9	ENSMUST00000160779	processed_transcript		8	1	94850977	878
ENSMUSG00000032324	protein_coding	Tspan3	ENSMUST00000215906	protein_coding		9	-1	56160542	842
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000145743	retained_intron		6	-1	148824466	3845
ENSMUSG00000031782	protein_coding	Coq9	ENSMUST00000211859	protein_coding		8	1	94853122	294
ENSMUSG00000032324	protein_coding	Tspan3	ENSMUST00000216317	retained_intron		9	-1	56160920	2129
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000144357	processed_transcript		6	-1	148817772	813
ENSMUSG00000032324	protein_coding	Tspan3	ENSMUST00000216320	protein_coding		9	-1	56165477	633
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000204936	nonsense_mediated_decay		6	-1	148831464	1408
ENSMUSG00000031782	protein_coding	Coq9	ENSMUST00000161208	retained_intron		8	1	94853515	368
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000145960	protein_coding		6	-1	148831426	1262
ENSMUSG00000090188	processed_pseudogene	Gm7418	ENSMUST00000162120	processed_pseudogene		8	1	94835717	801
ENSMUSG00000040029	protein_coding	Ipo8	ENSMUST00000205196	retained_intron		6	-1	148822209	2907
ENSMUSG00000107909	TEC	2610017A05Rik	ENSMUST00000204670	TEC		6	1	148831452	1661
ENSMUSG00000036832	protein_coding	Lpar3	ENSMUST00000039164	protein_coding	principal1	3	1	146220963	2464
ENSMUSG00000105209	TEC	Gm43334	ENSMUST00000197740	TEC		3	1	146324420	1318
ENSMUSG00000105602	lincRNA	Gm10636	ENSMUST00000197639	lincRNA		3	-1	146378944	2419
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000004985	protein_coding	principal2	17	1	28801090	7169
ENSMUSG00000117568	processed_pseudogene	Gm18832	ENSMUST00000234033	processed_pseudogene		17	-1	86685496	749
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000233646	protein_coding	alternative2	17	1	28801357	4497
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000233561	protein_coding	alternative2	17	1	28801357	4305
ENSMUSG00000028719	protein_coding	Cmpk1	ENSMUST00000030491	protein_coding	principal1	4	-1	114987241	3170
ENSMUSG00000028719	protein_coding	Cmpk1	ENSMUST00000131014	processed_transcript		4	-1	114987149	328
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000233709	nonsense_mediated_decay		17	1	28801357	4493
ENSMUSG00000028719	protein_coding	Cmpk1	ENSMUST00000129317	nonsense_mediated_decay		4	-1	114987072	262
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000136233	protein_coding		17	1	28801784	426
ENSMUSG00000028719	protein_coding	Cmpk1	ENSMUST00000133066	nonsense_mediated_decay		4	-1	114987149	651
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000233701	protein_coding		17	1	28805929	4223
ENSMUSG00000021743	protein_coding	Fezf2	ENSMUST00000224714	protein_coding	principal1	14	-1	12345844	2429
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000038815	protein_coding	principal1	6	-1	144209480	7243
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000232705	nonsense_mediated_decay		17	1	28805929	4046
ENSMUSG00000021743	protein_coding	Fezf2	ENSMUST00000022262	protein_coding	principal1	14	-1	12345959	2188
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000111749	protein_coding		6	-1	144209558	3879
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000143836	lincRNA		12	1	109541005	1896
ENSMUSG00000021743	protein_coding	Fezf2	ENSMUST00000224023	protein_coding		14	-1	12348189	1917
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000124106	lincRNA		12	1	109541007	1988
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000143272	lincRNA		12	1	109542023	5971
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000128178	lincRNA		12	1	109542268	457
ENSMUSG00000079003	protein_coding	Samd1	ENSMUST00000095228	protein_coding	principal1	8	1	83997501	2265
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000126289	lincRNA		12	1	109544498	755
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000146701	lincRNA		12	1	109545398	14548
ENSMUSG00000079003	protein_coding	Samd1	ENSMUST00000209606	retained_intron		8	1	83998424	441
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000232997	nonsense_mediated_decay		17	1	28806039	5046
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000111748	protein_coding		6	-1	143947106	1734
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000143847	lincRNA		12	1	109546445	706
ENSMUSG00000031781	protein_coding	Ciapin1	ENSMUST00000162538	protein_coding	principal1	8	-1	94838358	4359
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000128458	lincRNA		12	1	109549157	695
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000150851	lincRNA		12	1	109549255	421
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000126868	processed_transcript		17	1	28809659	498
ENSMUSG00000031781	protein_coding	Ciapin1	ENSMUST00000034233	protein_coding	principal1	8	-1	94838265	1807
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000156029	protein_coding		17	1	28810551	4525
ENSMUSG00000021268	lincRNA	Meg3	ENSMUST00000166636	lincRNA		12	1	109546391	797
ENSMUSG00000023259	protein_coding	Slc26a6	ENSMUST00000192559	nonsense_mediated_decay	alternative2	9	1	108854037	1799
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000148149	retained_intron		17	1	28814434	488
ENSMUSG00000031781	protein_coding	Ciapin1	ENSMUST00000161792	protein_coding		8	-1	94832659	1008
ENSMUSG00000023259	protein_coding	Slc26a6	ENSMUST00000193291	protein_coding	principal5	9	1	108854043	2725
ENSMUSG00000031781	protein_coding	Ciapin1	ENSMUST00000160245	retained_intron		8	-1	94824193	814
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000232940	processed_transcript		17	1	28818336	510
ENSMUSG00000031781	protein_coding	Ciapin1	ENSMUST00000162357	protein_coding		8	-1	94826714	346
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000077160	protein_coding		6	-1	144209452	2526
ENSMUSG00000031781	protein_coding	Ciapin1	ENSMUST00000161762	nonsense_mediated_decay		8	-1	94831862	775
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000144022	processed_transcript		17	1	28822639	663
ENSMUSG00000031781	protein_coding	Ciapin1	ENSMUST00000160898	retained_intron		8	-1	94826712	774
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000140587	protein_coding		17	1	28823572	843
ENSMUSG00000024140	protein_coding	Epas1	ENSMUST00000024954	protein_coding	principal1	17	1	86753700	5516
ENSMUSG00000031781	protein_coding	Ciapin1	ENSMUST00000160301	processed_transcript		8	-1	94832695	690
ENSMUSG00000030662	protein_coding	Ipo5	ENSMUST00000032898	protein_coding	principal1	14	1	120911224	4518
ENSMUSG00000019948	protein_coding	Actr6	ENSMUST00000020109	protein_coding	principal1	10	-1	89732295	1705
ENSMUSG00000031781	protein_coding	Ciapin1	ENSMUST00000159377	processed_transcript		8	-1	94838261	461
ENSMUSG00000024140	protein_coding	Epas1	ENSMUST00000234447	processed_transcript		17	1	86824333	332
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000233088	protein_coding		17	1	28823674	2597
ENSMUSG00000031781	protein_coding	Ciapin1	ENSMUST00000162589	retained_intron		8	-1	94838265	3803
ENSMUSG00000117538	TEC	Gm50008	ENSMUST00000234482	TEC		17	1	86773270	1379
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000233182	protein_coding		17	1	28823704	350
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000014080	protein_coding	principal1	5	1	122100951	662
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000233520	protein_coding		17	1	28823704	351
ENSMUSG00000030662	protein_coding	Ipo5	ENSMUST00000227270	retained_intron		14	1	120911233	2094
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000111750	protein_coding		5	1	122100957	729
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000111746	processed_transcript		6	-1	143947101	1244
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000140973	nonsense_mediated_decay		17	1	28824026	2326
ENSMUSG00000030662	protein_coding	Ipo5	ENSMUST00000228277	processed_transcript		14	1	120915847	4140
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000139213	protein_coding		5	1	122100980	476
ENSMUSG00000023259	protein_coding	Slc26a6	ENSMUST00000193463	retained_intron		9	1	108854074	3985
ENSMUSG00000063952	protein_coding	Brpf3	ENSMUST00000127007	retained_intron		17	1	28828082	895
ENSMUSG00000023259	protein_coding	Slc26a6	ENSMUST00000195646	retained_intron		9	1	108854094	2375
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000111751	protein_coding	principal1	5	1	122100983	889
ENSMUSG00000092607	protein_coding	Scnm1	ENSMUST00000172572	protein_coding		3	-1	95134011	1054
ENSMUSG00000023259	protein_coding	Slc26a6	ENSMUST00000188557	protein_coding	principal5	9	1	108854135	1985
ENSMUSG00000117255	bidirectional_promoter_lncRNA	Gm49864	ENSMUST00000233925	bidirectional_promoter_lncRNA		17	-1	28801623	2130
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000155612	protein_coding		5	1	122101032	433
ENSMUSG00000023259	protein_coding	Slc26a6	ENSMUST00000193874	nonsense_mediated_decay	alternative2	9	1	108855662	1931
ENSMUSG00000019948	protein_coding	Actr6	ENSMUST00000218965	processed_transcript		10	-1	89732273	618
ENSMUSG00000117301	antisense	Gm35883	ENSMUST00000233498	antisense		17	-1	28822757	615
ENSMUSG00000092607	protein_coding	Scnm1	ENSMUST00000174508	retained_intron		3	-1	95130684	686
ENSMUSG00000019948	protein_coding	Actr6	ENSMUST00000220059	processed_transcript		10	-1	89732282	614
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000147178	processed_transcript		5	1	122101161	469
ENSMUSG00000087439	antisense	Gm15788	ENSMUST00000140087	antisense		5	1	110262161	751
ENSMUSG00000019948	protein_coding	Actr6	ENSMUST00000220388	nonsense_mediated_decay		10	-1	89732273	594
ENSMUSG00000111257	processed_pseudogene	Gm21089	ENSMUST00000215843	processed_pseudogene		9	1	6594237	325
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000150535	protein_coding		5	1	122101385	473
ENSMUSG00000023259	protein_coding	Slc26a6	ENSMUST00000191404	protein_coding	alternative2	9	1	108912410	418
ENSMUSG00000087439	antisense	Gm15788	ENSMUST00000130123	antisense		5	1	110262169	613
ENSMUSG00000110732	processed_pseudogene	Gm48674	ENSMUST00000217088	processed_pseudogene		9	-1	6665775	279
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000153816	protein_coding		5	1	122101580	367
ENSMUSG00000023259	protein_coding	Slc26a6	ENSMUST00000098376	protein_coding	alternative2	9	1	108854037	2402
ENSMUSG00000019948	protein_coding	Actr6	ENSMUST00000218442	processed_transcript		10	-1	89732058	357
ENSMUSG00000092607	protein_coding	Scnm1	ENSMUST00000174859	retained_intron		3	-1	95133773	564
ENSMUSG00000092607	protein_coding	Scnm1	ENSMUST00000199730	retained_intron		3	-1	95130288	366
ENSMUSG00000019948	protein_coding	Actr6	ENSMUST00000218568	processed_transcript		10	-1	89732245	376
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000146733	protein_coding		5	1	122101797	312
ENSMUSG00000111464	processed_pseudogene	Gm48675	ENSMUST00000213261	processed_pseudogene		9	1	6801843	577
ENSMUSG00000092607	protein_coding	Scnm1	ENSMUST00000196728	retained_intron		3	-1	95130461	738
ENSMUSG00000112696	processed_pseudogene	Gm48815	ENSMUST00000219311	processed_pseudogene		10	-1	127636387	475
ENSMUSG00000092607	protein_coding	Scnm1	ENSMUST00000174835	processed_transcript		3	-1	95131266	444
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000123913	processed_transcript		5	1	122103179	528
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000152744	processed_transcript		5	1	122103181	467
ENSMUSG00000029499	protein_coding	Pxmp2	ENSMUST00000031472	protein_coding	principal1	5	-1	110286186	1041
ENSMUSG00000013936	protein_coding	Myl2	ENSMUST00000126006	protein_coding		5	1	122103913	184
ENSMUSG00000097111	antisense	Peak1os	ENSMUST00000181444	antisense		9	1	56257890	1264
ENSMUSG00000092607	protein_coding	Scnm1	ENSMUST00000173462	protein_coding	principal1	3	-1	95134011	666
ENSMUSG00000029499	protein_coding	Pxmp2	ENSMUST00000155266	nonsense_mediated_decay		5	-1	110286021	700
ENSMUSG00000102419	TEC	Gm36940	ENSMUST00000194281	TEC		9	-1	56416066	2036
ENSMUSG00000029499	protein_coding	Pxmp2	ENSMUST00000141550	processed_transcript		5	-1	110286002	427
ENSMUSG00000029499	protein_coding	Pxmp2	ENSMUST00000126882	retained_intron		5	-1	110286119	466
ENSMUSG00000025652	protein_coding	Tmem89	ENSMUST00000026744	protein_coding	principal1	9	1	108914619	538
ENSMUSG00000092607	protein_coding	Scnm1	ENSMUST00000173527	retained_intron		3	-1	95133939	774
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000141102	retained_intron		6	-1	144781977	2791
ENSMUSG00000025652	protein_coding	Tmem89	ENSMUST00000192852	protein_coding		9	1	108914619	945
ENSMUSG00000027485	protein_coding	Bpifb1	ENSMUST00000081816	protein_coding	principal1	2	1	154190818	1699
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000144289	protein_coding		6	-1	143947097	669
ENSMUSG00000111694	lincRNA	Gm48901	ENSMUST00000214666	lincRNA		9	1	27553480	374
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000124233	protein_coding		6	-1	143947088	614
ENSMUSG00000027485	protein_coding	Bpifb1	ENSMUST00000123017	retained_intron		2	1	154190823	3545
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000189246	protein_coding	principal2	12	1	86947043	1454
ENSMUSG00000110892	processed_pseudogene	Gm18585	ENSMUST00000215197	processed_pseudogene		9	-1	27583392	556
ENSMUSG00000111471	antisense	Gm47350	ENSMUST00000214559	antisense		9	-1	65094355	597
ENSMUSG00000110745	processed_pseudogene	Gm8106	ENSMUST00000213123	processed_pseudogene		9	1	27611600	523
ENSMUSG00000027485	protein_coding	Bpifb1	ENSMUST00000028987	protein_coding	principal1	2	1	154200379	1637
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000129050	retained_intron		6	-1	144204427	2470
ENSMUSG00000074305	protein_coding	Peak1	ENSMUST00000188142	protein_coding	alternative2	9	-1	56244065	7524
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000142294	retained_intron		6	-1	144209480	2949
ENSMUSG00000110851	lincRNA	Gm48902	ENSMUST00000213224	lincRNA		9	1	27616185	590
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000149451	processed_transcript		6	-1	144781919	1942
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000103091	protein_coding	principal2	2	-1	165320826	4695
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000139478	processed_transcript		6	-1	144204057	351
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000185434	nonsense_mediated_decay		12	1	86947043	2695
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000150087	retained_intron		6	-1	144209568	633
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000191032	nonsense_mediated_decay		12	1	86947099	872
ENSMUSG00000041540	protein_coding	Sox5	ENSMUST00000170367	protein_coding		6	-1	144209568	7184
ENSMUSG00000086731	antisense	Sox5os5	ENSMUST00000152192	antisense		6	1	144723565	207
ENSMUSG00000074305	protein_coding	Peak1	ENSMUST00000061552	protein_coding	principal2	9	-1	56418067	6996
ENSMUSG00000072677	sense_intronic	Sox5it	ENSMUST00000144026	sense_intronic		6	-1	144672720	1207
ENSMUSG00000074305	protein_coding	Peak1	ENSMUST00000186735	protein_coding		9	-1	56418042	372
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000148643	protein_coding		2	-1	165296977	2078
ENSMUSG00000043036	protein_coding	Ccdc63	ENSMUST00000058960	protein_coding	principal1	5	-1	122138062	2299
ENSMUSG00000074305	protein_coding	Peak1	ENSMUST00000185775	retained_intron		9	-1	56418050	1352
ENSMUSG00000086282	antisense	Sox5os4	ENSMUST00000155562	antisense		6	1	144720911	365
ENSMUSG00000043036	protein_coding	Ccdc63	ENSMUST00000198618	retained_intron		5	-1	122111113	636
ENSMUSG00000087302	antisense	Sox5os1	ENSMUST00000156994	antisense		6	1	144021908	1585
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000187814	protein_coding	alternative2	12	1	86947343	4098
ENSMUSG00000043036	protein_coding	Ccdc63	ENSMUST00000152389	nonsense_mediated_decay		5	-1	122134815	2034
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000188901	retained_intron		12	1	86947396	526
ENSMUSG00000043036	protein_coding	Ccdc63	ENSMUST00000128101	protein_coding		5	-1	122132003	574
ENSMUSG00000099543	sense_intronic	Gm29322	ENSMUST00000185378	sense_intronic		9	-1	56240751	582
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000188046	nonsense_mediated_decay		12	1	86947418	564
ENSMUSG00000043036	protein_coding	Ccdc63	ENSMUST00000132701	protein_coding		5	-1	122132003	258
ENSMUSG00000102617	TEC	Gm37842	ENSMUST00000192330	TEC		9	1	56263599	1569
ENSMUSG00000085785	antisense	Sox5os3	ENSMUST00000139351	antisense		6	1	144672868	906
ENSMUSG00000043036	protein_coding	Ccdc63	ENSMUST00000146235	retained_intron		5	-1	122138957	596
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000185783	nonsense_mediated_decay		12	1	86947454	426
ENSMUSG00000085785	antisense	Sox5os3	ENSMUST00000154167	antisense		6	1	144679702	765
ENSMUSG00000043036	protein_coding	Ccdc63	ENSMUST00000196608	retained_intron		5	-1	122140823	4705
ENSMUSG00000099798	lincRNA	Gm29168	ENSMUST00000189953	lincRNA		17	1	86840030	687
ENSMUSG00000034121	protein_coding	Mks1	ENSMUST00000038196	protein_coding	principal1	11	1	87853215	2499
ENSMUSG00000107796	TEC	Gm44068	ENSMUST00000204049	TEC		6	-1	143990867	2128
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000186499	protein_coding		12	1	86947466	393
ENSMUSG00000082322	processed_pseudogene	Gm9164	ENSMUST00000118700	processed_pseudogene		X	-1	103888612	1014
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000190588	nonsense_mediated_decay		12	1	86947490	573
ENSMUSG00000087157	antisense	Sox5os2	ENSMUST00000156443	antisense		6	1	144481225	627
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000191463	protein_coding	alternative2	12	1	86952657	1499
ENSMUSG00000098784	lincRNA	Gm27174	ENSMUST00000184493	lincRNA		14	-1	69555332	2174
ENSMUSG00000034157	protein_coding	Cipc	ENSMUST00000038369	protein_coding	principal2	12	1	86947343	4098
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000074046	protein_coding		2	-1	165326479	3502
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000094329	protein_coding	principal2	2	-1	165326479	3466
ENSMUSG00000103862	TEC	Gm10764	ENSMUST00000220397	TEC		10	1	87289493	2335
ENSMUSG00000034121	protein_coding	Mks1	ENSMUST00000130135	retained_intron		11	1	87853227	1601
ENSMUSG00000103862	TEC	Gm10764	ENSMUST00000193976	TEC		10	1	87290733	378
ENSMUSG00000006527	protein_coding	Sfmbt1	ENSMUST00000112184	protein_coding	principal1	14	1	30714849	2936
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000103088	protein_coding	alternative2	2	-1	165326479	3052
ENSMUSG00000034121	protein_coding	Mks1	ENSMUST00000153729	retained_intron		11	1	87853665	2194
ENSMUSG00000112213	lincRNA	4930555G07Rik	ENSMUST00000219879	lincRNA		10	1	87230760	750
ENSMUSG00000026188	protein_coding	Tmem169	ENSMUST00000027380	protein_coding	principal1	1	1	72284369	2928
ENSMUSG00000034121	protein_coding	Mks1	ENSMUST00000149256	retained_intron		11	1	87856563	479
ENSMUSG00000112213	lincRNA	4930555G07Rik	ENSMUST00000218226	lincRNA		10	1	87230768	634
ENSMUSG00000006527	protein_coding	Sfmbt1	ENSMUST00000227201	protein_coding		14	1	30715167	2186
ENSMUSG00000034121	protein_coding	Mks1	ENSMUST00000135369	retained_intron		11	1	87861937	688
ENSMUSG00000026188	protein_coding	Tmem169	ENSMUST00000141783	protein_coding		1	1	72284395	697
ENSMUSG00000006527	protein_coding	Sfmbt1	ENSMUST00000054230	protein_coding	principal1	14	1	30715615	7837
ENSMUSG00000037689	protein_coding	Tmem247	ENSMUST00000042172	protein_coding		17	1	86917348	752
ENSMUSG00000037689	protein_coding	Tmem247	ENSMUST00000202221	protein_coding	principal1	17	1	86918409	367
ENSMUSG00000006527	protein_coding	Sfmbt1	ENSMUST00000228006	protein_coding	principal1	14	1	30716491	3299
ENSMUSG00000075199	protein_coding	Olfr52	ENSMUST00000215138	protein_coding	principal1	2	-1	86185683	2751
ENSMUSG00000029500	protein_coding	Pgam5	ENSMUST00000112505	protein_coding	alternative1	5	-1	110269913	2098
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000071699	protein_coding	alternative2	2	-1	165316903	3247
ENSMUSG00000075199	protein_coding	Olfr52	ENSMUST00000099905	protein_coding	principal1	2	-1	86182109	960
ENSMUSG00000006527	protein_coding	Sfmbt1	ENSMUST00000227303	protein_coding		14	1	30766074	2960
ENSMUSG00000081689	processed_pseudogene	Gm9166	ENSMUST00000120293	processed_pseudogene		X	-1	103926984	561
ENSMUSG00000116776	processed_pseudogene	Gm46544	ENSMUST00000232027	processed_pseudogene		16	-1	20797773	547
ENSMUSG00000006527	protein_coding	Sfmbt1	ENSMUST00000227445	retained_intron		14	1	30796351	633
ENSMUSG00000115370	processed_pseudogene	Gm15667	ENSMUST00000227272	processed_pseudogene		14	1	30804379	782
ENSMUSG00000115723	antisense	1700087M22Rik	ENSMUST00000227408	antisense		14	-1	30778004	208
ENSMUSG00000029238	protein_coding	Clock	ENSMUST00000202651	protein_coding	principal3	5	-1	76304792	9744
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000127496	processed_transcript		2	-1	165314306	795
ENSMUSG00000075198	protein_coding	Olfr1045	ENSMUST00000215763	protein_coding	principal1	2	-1	86202929	2960
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000137188	protein_coding		2	-1	165311752	581
ENSMUSG00000075198	protein_coding	Olfr1045	ENSMUST00000216885	processed_transcript		2	-1	86203009	2924
ENSMUSG00000029238	protein_coding	Clock	ENSMUST00000075159	protein_coding	principal3	5	-1	76304548	7478
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000149844	retained_intron		2	-1	165311642	557
ENSMUSG00000075198	protein_coding	Olfr1045	ENSMUST00000099904	protein_coding	principal1	2	-1	86198750	948
ENSMUSG00000029500	protein_coding	Pgam5	ENSMUST00000059229	protein_coding	principal3	5	-1	110269887	2044
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000126318	nonsense_mediated_decay		2	-1	165316351	639
ENSMUSG00000029238	protein_coding	Clock	ENSMUST00000202122	protein_coding	alternative2	5	-1	76274012	5508
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000133205	protein_coding		2	-1	165316575	627
ENSMUSG00000116922	lincRNA	4833419O12Rik	ENSMUST00000231314	lincRNA		16	-1	20803385	1064
ENSMUSG00000029500	protein_coding	Pgam5	ENSMUST00000136738	retained_intron		5	-1	110266035	620
ENSMUSG00000017670	protein_coding	Elmo2	ENSMUST00000128690	protein_coding		2	-1	165326479	352
ENSMUSG00000029500	protein_coding	Pgam5	ENSMUST00000196381	protein_coding		5	-1	110269854	553
ENSMUSG00000107487	processed_pseudogene	Gm44156	ENSMUST00000203885	processed_pseudogene		6	-1	140057589	1189
ENSMUSG00000107936	processed_pseudogene	Gm44155	ENSMUST00000203923	processed_pseudogene		6	1	140057583	412
ENSMUSG00000116721	processed_pseudogene	Gm9536	ENSMUST00000231573	processed_pseudogene		16	1	20820381	323
ENSMUSG00000108047	processed_pseudogene	Gm44158	ENSMUST00000203881	processed_pseudogene		6	-1	140070498	505
ENSMUSG00000029238	protein_coding	Clock	ENSMUST00000202857	retained_intron		5	-1	76304754	2473
ENSMUSG00000107407	processed_pseudogene	Gm44159	ENSMUST00000204065	processed_pseudogene		6	1	140132067	442
ENSMUSG00000025651	protein_coding	Uqcrc1	ENSMUST00000026743	protein_coding	principal1	9	1	108936633	1653
ENSMUSG00000029238	protein_coding	Clock	ENSMUST00000200957	processed_transcript		5	-1	76304772	1889
ENSMUSG00000107572	TEC	Gm3961	ENSMUST00000204425	TEC		6	-1	140296456	994
ENSMUSG00000029238	protein_coding	Clock	ENSMUST00000201052	retained_intron		5	-1	76304772	2287
ENSMUSG00000002897	protein_coding	Il17ra	ENSMUST00000204239	retained_intron		6	1	120463247	4804
ENSMUSG00000032393	protein_coding	Dpp8	ENSMUST00000034960	protein_coding	principal1	9	1	65032414	4808
ENSMUSG00000025651	protein_coding	Uqcrc1	ENSMUST00000194047	protein_coding		9	1	108936714	580
ENSMUSG00000099764	processed_pseudogene	Rps10-ps2	ENSMUST00000127484	processed_pseudogene		16	-1	20822640	496
ENSMUSG00000025651	protein_coding	Uqcrc1	ENSMUST00000195738	nonsense_mediated_decay		9	1	108936715	582
ENSMUSG00000032393	protein_coding	Dpp8	ENSMUST00000167773	protein_coding	principal1	9	1	65032722	3142
ENSMUSG00000108229	TEC	1700102F20Rik	ENSMUST00000203859	TEC		6	1	140309071	670
ENSMUSG00000025651	protein_coding	Uqcrc1	ENSMUST00000195387	retained_intron		9	1	108936892	732
ENSMUSG00000025651	protein_coding	Uqcrc1	ENSMUST00000192305	protein_coding		9	1	108942122	370
ENSMUSG00000033900	protein_coding	Map9	ENSMUST00000193559	protein_coding		3	1	82358044	1819
ENSMUSG00000002897	protein_coding	Il17ra	ENSMUST00000002976	protein_coding	principal1	6	1	120463247	7752
ENSMUSG00000033900	protein_coding	Map9	ENSMUST00000192595	protein_coding		3	1	82358072	1274
ENSMUSG00000025651	protein_coding	Uqcrc1	ENSMUST00000193332	retained_intron		9	1	108946165	2473
ENSMUSG00000075197	protein_coding	Olfr1046	ENSMUST00000213987	protein_coding	principal1	2	-1	86219314	2770
ENSMUSG00000025651	protein_coding	Uqcrc1	ENSMUST00000194469	protein_coding		9	1	108947417	486
ENSMUSG00000033900	protein_coding	Map9	ENSMUST00000195471	protein_coding		3	1	82358170	1713
ENSMUSG00000002897	protein_coding	Il17ra	ENSMUST00000204078	processed_transcript		6	1	120473603	805
ENSMUSG00000032393	protein_coding	Dpp8	ENSMUST00000217434	nonsense_mediated_decay		9	1	65032778	5515
ENSMUSG00000075197	protein_coding	Olfr1046	ENSMUST00000099902	protein_coding	principal1	2	-1	86217708	951
ENSMUSG00000032393	protein_coding	Dpp8	ENSMUST00000216010	retained_intron		9	1	65052591	3864
ENSMUSG00000025651	protein_coding	Uqcrc1	ENSMUST00000192918	retained_intron		9	1	108948311	497
ENSMUSG00000032393	protein_coding	Dpp8	ENSMUST00000216309	processed_transcript		9	1	65059775	3265
ENSMUSG00000116850	lincRNA	Gm49742	ENSMUST00000232124	lincRNA		16	-1	20893559	808
ENSMUSG00000032393	protein_coding	Dpp8	ENSMUST00000217328	processed_transcript		9	1	65075003	699
ENSMUSG00000094626	protein_coding	Tmem121b	ENSMUST00000178687	protein_coding	principal1	6	-1	120493807	4869
ENSMUSG00000103754	TEC	Gm37284	ENSMUST00000193607	TEC		9	-1	108950541	539
ENSMUSG00000032393	protein_coding	Dpp8	ENSMUST00000214247	retained_intron		9	1	65075469	836
ENSMUSG00000107891	processed_pseudogene	Gm5051	ENSMUST00000204085	processed_pseudogene		6	1	140420171	485
ENSMUSG00000032393	protein_coding	Dpp8	ENSMUST00000214678	processed_transcript		9	1	65075748	416
ENSMUSG00000033900	protein_coding	Map9	ENSMUST00000195640	protein_coding	principal1	3	1	82358187	6162
ENSMUSG00000033900	protein_coding	Map9	ENSMUST00000194622	retained_intron		3	1	82379712	578
ENSMUSG00000033900	protein_coding	Map9	ENSMUST00000195793	protein_coding		3	1	82380073	277
ENSMUSG00000033900	protein_coding	Map9	ENSMUST00000091014	protein_coding	principal1	3	1	82358072	6218
ENSMUSG00000006418	protein_coding	Rnf114	ENSMUST00000109214	protein_coding	principal1	2	1	167492645	3001
ENSMUSG00000095082	protein_coding	Gm15091	ENSMUST00000112740	protein_coding	principal1	X	1	149941655	2026
ENSMUSG00000085925	protein_coding	Rtl1	ENSMUST00000149046	protein_coding	principal1	12	-1	109600330	6358
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000010899	protein_coding	principal3	7	-1	143600090	3222
ENSMUSG00000095534	unprocessed_pseudogene	Gm15102	ENSMUST00000118740	unprocessed_pseudogene		X	1	150013712	1502
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000208575	nonsense_mediated_decay		7	-1	143565015	558
ENSMUSG00000006418	protein_coding	Rnf114	ENSMUST00000078050	protein_coding	principal1	2	1	167503089	2502
ENSMUSG00000081827	unprocessed_pseudogene	Gm15103	ENSMUST00000119893	unprocessed_pseudogene		X	1	150032993	871
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000105909	protein_coding	alternative1	7	-1	143600056	2462
ENSMUSG00000006418	protein_coding	Rnf114	ENSMUST00000127939	nonsense_mediated_decay		2	1	167503446	1985
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000135032	retained_intron		7	-1	143568356	384
ENSMUSG00000081085	processed_pseudogene	Gm13463	ENSMUST00000119020	processed_pseudogene		2	1	42124621	233
ENSMUSG00000094767	processed_pseudogene	Gm8402	ENSMUST00000118183	processed_pseudogene		X	1	150083529	1770
ENSMUSG00000093739	antisense	Gm20692	ENSMUST00000177251	antisense		6	1	120512449	681
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000134753	retained_intron		7	-1	143569122	731
ENSMUSG00000082930	processed_pseudogene	Gm13462	ENSMUST00000121472	processed_pseudogene		2	1	40958391	961
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000146462	retained_intron		7	-1	143570199	592
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000146904	retained_intron		7	-1	143574609	833
ENSMUSG00000047030	protein_coding	Spata2	ENSMUST00000057627	protein_coding	principal1	2	-1	167492887	4012
ENSMUSG00000048592	transcribed_processed_pseudogene	Gm5946	ENSMUST00000182652	processed_transcript		X	-1	150226021	2724
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000154022	protein_coding		7	-1	143596752	539
ENSMUSG00000048592	transcribed_processed_pseudogene	Gm5946	ENSMUST00000182340	transcribed_processed_pseudogene		X	-1	150223335	970
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000134128	processed_transcript		7	-1	143599681	307
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000151574	processed_transcript		7	-1	143600031	430
ENSMUSG00000047030	protein_coding	Spata2	ENSMUST00000109211	protein_coding		2	-1	167492845	1531
ENSMUSG00000025409	protein_coding	Mbd6	ENSMUST00000136169	nonsense_mediated_decay		10	-1	127283668	717
ENSMUSG00000010755	protein_coding	Cars	ENSMUST00000207168	retained_intron		7	-1	143600080	2213
ENSMUSG00000047030	protein_coding	Spata2	ENSMUST00000147051	retained_intron		2	-1	167485830	733
ENSMUSG00000087360	lincRNA	Gm15104	ENSMUST00000132626	lincRNA		X	-1	150333065	842
ENSMUSG00000087360	lincRNA	Gm15104	ENSMUST00000165760	lincRNA		X	-1	150313364	414
ENSMUSG00000118421	unitary_pseudogene	Gm50491	ENSMUST00000238741	unitary_pseudogene		9	1	20893243	530
ENSMUSG00000028841	protein_coding	Cnksr1	ENSMUST00000030645	protein_coding	principal1	4	-1	134238399	2468
ENSMUSG00000058979	protein_coding	Hdhd5	ENSMUST00000075303	protein_coding	principal1	6	-1	120531319	1928
ENSMUSG00000081928	processed_pseudogene	Gm15105	ENSMUST00000117777	processed_pseudogene		X	-1	150367916	204
ENSMUSG00000047030	protein_coding	Spata2	ENSMUST00000126389	processed_transcript		2	-1	167492872	414
ENSMUSG00000058979	protein_coding	Hdhd5	ENSMUST00000141029	retained_intron		6	-1	120531304	1882
ENSMUSG00000047030	protein_coding	Spata2	ENSMUST00000155875	processed_transcript		2	-1	167492845	475
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000129974	processed_transcript		2	-1	40615251	2298
ENSMUSG00000058979	protein_coding	Hdhd5	ENSMUST00000125666	retained_intron		6	-1	120531290	639
ENSMUSG00000047030	protein_coding	Spata2	ENSMUST00000154770	processed_transcript		2	-1	167492878	462
ENSMUSG00000058979	protein_coding	Hdhd5	ENSMUST00000204390	retained_intron		6	-1	120531302	1356
ENSMUSG00000025409	protein_coding	Mbd6	ENSMUST00000126243	nonsense_mediated_decay		10	-1	127285900	2909
ENSMUSG00000028841	protein_coding	Cnksr1	ENSMUST00000144504	processed_transcript		4	-1	134238339	2395
ENSMUSG00000117457	lincRNA	Gm50011	ENSMUST00000234807	lincRNA		17	1	86928973	631
ENSMUSG00000028841	protein_coding	Cnksr1	ENSMUST00000146283	processed_transcript		4	-1	134230435	396
ENSMUSG00000028841	protein_coding	Cnksr1	ENSMUST00000145998	processed_transcript		4	-1	134233154	450
ENSMUSG00000028841	protein_coding	Cnksr1	ENSMUST00000124181	processed_transcript		4	-1	134235939	956
ENSMUSG00000053375	protein_coding	Atp6v1e2	ENSMUST00000233995	protein_coding	principal1	17	-1	86947871	1277
ENSMUSG00000053375	protein_coding	Atp6v1e2	ENSMUST00000065758	protein_coding	principal1	17	-1	86947887	1005
ENSMUSG00000075196	protein_coding	Olfr1047	ENSMUST00000216056	protein_coding	principal1	2	-1	86231401	2450
ENSMUSG00000023980	protein_coding	Taf8	ENSMUST00000233174	protein_coding	alternative2	17	-1	47502287	1263
ENSMUSG00000053375	protein_coding	Atp6v1e2	ENSMUST00000235110	protein_coding	principal1	17	-1	86947897	1214
ENSMUSG00000075196	protein_coding	Olfr1047	ENSMUST00000099901	protein_coding	principal1	2	-1	86228969	960
ENSMUSG00000027322	protein_coding	Siglec1	ENSMUST00000028794	protein_coding	principal2	2	-1	131086765	6387
ENSMUSG00000116659	unprocessed_pseudogene	Gm6551	ENSMUST00000232604	unprocessed_pseudogene		16	1	20928969	885
ENSMUSG00000027322	protein_coding	Siglec1	ENSMUST00000110227	protein_coding	alternative2	2	-1	131086765	5790
ENSMUSG00000116732	processed_pseudogene	Gm18769	ENSMUST00000232658	processed_pseudogene		16	-1	20961142	516
ENSMUSG00000027322	protein_coding	Siglec1	ENSMUST00000110226	protein_coding		2	-1	131086765	1861
ENSMUSG00000023980	protein_coding	Taf8	ENSMUST00000067103	protein_coding	principal2	17	-1	47502292	2784
ENSMUSG00000075569	protein_coding	Rsph10b	ENSMUST00000031618	processed_transcript		5	1	143933035	888
ENSMUSG00000116592	processed_pseudogene	Gm18770	ENSMUST00000231537	processed_pseudogene		16	1	21021328	515
ENSMUSG00000023980	protein_coding	Taf8	ENSMUST00000233121	protein_coding	alternative2	17	-1	47502287	2793
ENSMUSG00000025555	protein_coding	Farp1	ENSMUST00000135010	protein_coding		14	1	121035200	797
ENSMUSG00000116710	unprocessed_pseudogene	Gm6557	ENSMUST00000232295	unprocessed_pseudogene		16	-1	21063094	882
ENSMUSG00000023980	protein_coding	Taf8	ENSMUST00000233274	retained_intron		17	-1	47502289	1692
ENSMUSG00000023980	protein_coding	Taf8	ENSMUST00000233675	retained_intron		17	-1	47502272	337
ENSMUSG00000020793	protein_coding	Galr2	ENSMUST00000055872	protein_coding	principal1	11	1	116280939	1940
ENSMUSG00000075195	protein_coding	Olfr1048	ENSMUST00000215607	protein_coding	alternative2	2	-1	86240289	2981
ENSMUSG00000020793	protein_coding	Galr2	ENSMUST00000154277	processed_transcript		11	1	116281486	1632
ENSMUSG00000075195	protein_coding	Olfr1048	ENSMUST00000099900	protein_coding	principal2	2	-1	86236833	963
ENSMUSG00000086936	processed_pseudogene	Gm9697	ENSMUST00000147052	processed_pseudogene		16	1	21079670	997
ENSMUSG00000075569	protein_coding	Rsph10b	ENSMUST00000166847	protein_coding	principal1	5	1	143933062	2878
ENSMUSG00000075569	protein_coding	Rsph10b	ENSMUST00000212711	protein_coding		5	1	143959692	1453
ENSMUSG00000025555	protein_coding	Farp1	ENSMUST00000026635	protein_coding	principal1	14	1	121035564	4885
ENSMUSG00000025409	protein_coding	Mbd6	ENSMUST00000026476	protein_coding	principal3	10	-1	127288890	4165
ENSMUSG00000075569	protein_coding	Rsph10b	ENSMUST00000164604	processed_transcript		5	1	143981152	341
ENSMUSG00000075569	protein_coding	Rsph10b	ENSMUST00000169758	protein_coding		5	1	143937083	702
ENSMUSG00000024143	protein_coding	Rhoq	ENSMUST00000024956	protein_coding	principal1	17	1	86963082	4151
ENSMUSG00000104633	protein_coding	Gm42421	ENSMUST00000172367	protein_coding	principal1	5	1	143928175	719
ENSMUSG00000025555	protein_coding	Farp1	ENSMUST00000153607	processed_transcript		14	1	121102079	777
ENSMUSG00000024143	protein_coding	Rhoq	ENSMUST00000139344	protein_coding		17	1	86963292	544
ENSMUSG00000025555	protein_coding	Farp1	ENSMUST00000137971	retained_intron		14	1	121254908	961
ENSMUSG00000024143	protein_coding	Rhoq	ENSMUST00000234309	protein_coding		17	1	86994595	653
ENSMUSG00000025409	protein_coding	Mbd6	ENSMUST00000119078	protein_coding	alternative2	10	-1	127289018	4287
ENSMUSG00000117628	sense_intronic	Gm50012	ENSMUST00000234698	sense_intronic		17	1	86970372	1878
ENSMUSG00000085133	sense_intronic	B930095G15Rik	ENSMUST00000130256	sense_intronic		14	1	121248706	4715
ENSMUSG00000025409	protein_coding	Mbd6	ENSMUST00000154851	protein_coding		10	-1	127284358	543
ENSMUSG00000025409	protein_coding	Mbd6	ENSMUST00000172567	protein_coding	alternative2	10	-1	127284371	624
ENSMUSG00000025409	protein_coding	Mbd6	ENSMUST00000156208	protein_coding		10	-1	127288853	711
ENSMUSG00000025410	protein_coding	Dctn2	ENSMUST00000217692	retained_intron		10	1	127266368	2557
ENSMUSG00000026187	protein_coding	Xrcc5	ENSMUST00000027379	protein_coding	principal1	1	1	72307427	2549
ENSMUSG00000024145	protein_coding	Pigf	ENSMUST00000024957	protein_coding	principal1	17	-1	87025406	988
ENSMUSG00000048939	protein_coding	Atp13a5	ENSMUST00000075806	protein_coding	principal1	16	-1	29378732	4598
ENSMUSG00000116731	processed_pseudogene	Gm18771	ENSMUST00000232109	processed_pseudogene		16	1	21121830	515
ENSMUSG00000102838	TEC	Gm37014	ENSMUST00000194723	TEC		1	1	136057181	2253
ENSMUSG00000048939	protein_coding	Atp13a5	ENSMUST00000142681	nonsense_mediated_decay		16	-1	29378706	4572
ENSMUSG00000020516	protein_coding	Rps6kb1	ENSMUST00000154617	protein_coding	principal1	11	-1	86544805	5531
ENSMUSG00000090356	protein_coding	Teddm3	ENSMUST00000170665	protein_coding	principal1	16	-1	21154000	1346
ENSMUSG00000048939	protein_coding	Atp13a5	ENSMUST00000143373	protein_coding		16	-1	29378667	3789
ENSMUSG00000048939	protein_coding	Atp13a5	ENSMUST00000152040	protein_coding		16	-1	29378583	728
ENSMUSG00000020516	protein_coding	Rps6kb1	ENSMUST00000020824	retained_intron		11	-1	86544805	2771
ENSMUSG00000083141	processed_pseudogene	Gm15752	ENSMUST00000117427	processed_pseudogene		16	-1	29284359	394
ENSMUSG00000022414	protein_coding	Tab1	ENSMUST00000230479	retained_intron		15	1	80133127	504
ENSMUSG00000020516	protein_coding	Rps6kb1	ENSMUST00000149392	processed_transcript		11	-1	86511645	754
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000146100	protein_coding	principal1	8	-1	71725716	3188
ENSMUSG00000020516	protein_coding	Rps6kb1	ENSMUST00000131194	processed_transcript		11	-1	86520039	469
ENSMUSG00000102707	processed_pseudogene	Gm38311	ENSMUST00000192945	processed_pseudogene		3	1	14330227	165
ENSMUSG00000104375	unprocessed_pseudogene	Gm6300	ENSMUST00000192393	unprocessed_pseudogene		3	1	14363117	1498
ENSMUSG00000103626	processed_pseudogene	Gm37358	ENSMUST00000195492	processed_pseudogene		3	-1	14384400	479
ENSMUSG00000022414	protein_coding	Tab1	ENSMUST00000023050	protein_coding	principal1	15	1	80133127	2964
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000052550	protein_coding	principal1	2	-1	42653624	16294
ENSMUSG00000025410	protein_coding	Dctn2	ENSMUST00000026479	protein_coding	principal1	10	1	127266387	1784
ENSMUSG00000020516	protein_coding	Rps6kb1	ENSMUST00000058286	protein_coding		11	-1	86544774	3250
ENSMUSG00000098036	processed_pseudogene	Gm8955	ENSMUST00000182945	processed_pseudogene		3	-1	14435009	1008
ENSMUSG00000028833	protein_coding	Ncdn	ENSMUST00000030637	protein_coding	principal1	4	-1	126753409	3681
ENSMUSG00000022414	protein_coding	Tab1	ENSMUST00000229320	nonsense_mediated_decay		15	1	80133157	501
ENSMUSG00000025410	protein_coding	Dctn2	ENSMUST00000220418	retained_intron		10	1	127276940	521
ENSMUSG00000020516	protein_coding	Rps6kb1	ENSMUST00000151748	retained_intron		11	-1	86532840	465
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000142546	protein_coding		2	-1	40702800	3796
ENSMUSG00000020516	protein_coding	Rps6kb1	ENSMUST00000138810	protein_coding		11	-1	86544765	555
ENSMUSG00000025410	protein_coding	Dctn2	ENSMUST00000218556	retained_intron		10	1	127277281	882
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000203015	protein_coding		2	-1	40657388	864
ENSMUSG00000025410	protein_coding	Dctn2	ENSMUST00000218752	retained_intron		10	1	127277406	820
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000134032	retained_intron		2	-1	40699776	740
ENSMUSG00000028833	protein_coding	Ncdn	ENSMUST00000106116	protein_coding	principal1	4	-1	126753427	2434
ENSMUSG00000092593	processed_transcript	Gm20492	ENSMUST00000172591	processed_transcript		10	1	127288514	286
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000203080	protein_coding		2	-1	42653057	2586
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000138700	retained_intron		2	-1	42653073	4063
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000059256	protein_coding	principal1	X	-1	150441137	1402
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000204204	protein_coding		2	-1	42652926	798
ENSMUSG00000028833	protein_coding	Ncdn	ENSMUST00000127079	processed_transcript		4	-1	126753438	2375
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000133104	retained_intron		2	-1	42653256	2557
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000148968	processed_transcript		X	-1	150459154	1316
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000142688	protein_coding		2	-1	42653015	2911
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000141948	processed_transcript		X	-1	150441106	1250
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000185258	protein_coding		2	-1	40627336	1874
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000127532	processed_transcript		X	-1	150441163	1398
ENSMUSG00000049252	protein_coding	Lrp1b	ENSMUST00000167270	protein_coding		2	-1	41789078	10071
ENSMUSG00000040712	protein_coding	Camta2	ENSMUST00000108545	protein_coding		11	-1	70687943	4377
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000151067	processed_transcript		X	-1	150459154	864
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000155740	retained_intron		X	-1	150459154	3673
ENSMUSG00000118502	unitary_pseudogene	AL645861.1	ENSMUST00000238971	unitary_pseudogene		11	1	116285558	561
ENSMUSG00000081999	processed_pseudogene	Gm13461	ENSMUST00000120980	processed_pseudogene		2	-1	41988829	662
ENSMUSG00000020521	protein_coding	Rnft1	ENSMUST00000020827	protein_coding	principal1	11	1	86484657	4452
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000128771	processed_transcript		X	-1	150440905	669
ENSMUSG00000114547	processed_pseudogene	Gm3226	ENSMUST00000225150	processed_pseudogene		13	-1	112595084	1342
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000143699	retained_intron		8	-1	71725666	3351
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000134601	processed_transcript		X	-1	150440789	523
ENSMUSG00000083260	processed_pseudogene	Gm13460	ENSMUST00000121274	processed_pseudogene		2	1	40998857	353
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000143526	processed_transcript		X	-1	150435522	748
ENSMUSG00000025650	protein_coding	Col7a1	ENSMUST00000112070	protein_coding	principal1	9	1	108953586	9250
ENSMUSG00000020521	protein_coding	Rnft1	ENSMUST00000125675	processed_transcript		11	1	86484685	815
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000136640	nonsense_mediated_decay		8	-1	71725666	2966
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000130339	processed_transcript		X	-1	150459150	411
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000173996	protein_coding	principal1	X	-1	150459150	1433
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000149363	retained_intron		8	-1	71711106	599
ENSMUSG00000020521	protein_coding	Rnft1	ENSMUST00000131246	processed_transcript		11	1	86484730	382
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000127005	retained_intron		8	-1	71712179	1027
ENSMUSG00000041353	protein_coding	Tmem29	ENSMUST00000163233	protein_coding		X	-1	150440905	1256
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000090561	protein_coding	principal1	3	1	108383839	1686
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000123425	nonsense_mediated_decay		8	-1	71715553	682
ENSMUSG00000025650	protein_coding	Col7a1	ENSMUST00000192424	retained_intron		9	1	108954487	245
ENSMUSG00000113244	lincRNA	Gm31218	ENSMUST00000221181	lincRNA		13	1	64449437	1498
ENSMUSG00000040712	protein_coding	Camta2	ENSMUST00000120261	protein_coding		11	-1	70687943	4398
ENSMUSG00000082974	processed_pseudogene	Gm15129	ENSMUST00000119673	processed_pseudogene		X	1	150431503	279
ENSMUSG00000113244	lincRNA	Gm31218	ENSMUST00000221428	lincRNA		13	1	64449471	1823
ENSMUSG00000025650	protein_coding	Col7a1	ENSMUST00000127905	retained_intron		9	1	108967664	341
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000141323	retained_intron		8	-1	71716635	733
ENSMUSG00000052234	protein_coding	Epx	ENSMUST00000049768	protein_coding	principal1	11	-1	87875536	2689
ENSMUSG00000096537	protein_coding	Fam240b	ENSMUST00000180282	protein_coding	principal1	13	-1	64497792	1097
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000153800	protein_coding		8	-1	71725704	746
ENSMUSG00000075069	protein_coding	Olfr1264	ENSMUST00000216616	protein_coding	principal1	2	-1	90025577	4311
ENSMUSG00000052234	protein_coding	Epx	ENSMUST00000125590	processed_transcript		11	-1	87871768	658
ENSMUSG00000075069	protein_coding	Olfr1264	ENSMUST00000099758	protein_coding	principal1	2	-1	90022064	927
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000126455	processed_transcript		8	-1	71721865	732
ENSMUSG00000113109	transcribed_processed_pseudogene	Gm7712	ENSMUST00000222214	processed_transcript		13	-1	64457428	337
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000152742	retained_intron		8	-1	71725647	678
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000148011	protein_coding	principal1	5	1	143909964	5482
ENSMUSG00000113109	transcribed_processed_pseudogene	Gm7712	ENSMUST00000222331	transcribed_processed_pseudogene		13	-1	64458923	1510
ENSMUSG00000093891	processed_pseudogene	Gm2866	ENSMUST00000166053	processed_pseudogene		14	-1	3682005	481
ENSMUSG00000040712	protein_coding	Camta2	ENSMUST00000036299	protein_coding	principal3	11	-1	70687953	4495
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000125092	protein_coding		8	-1	71723347	443
ENSMUSG00000070000	protein_coding	Fcho1	ENSMUST00000093444	protein_coding	principal1	8	-1	71721307	3073
ENSMUSG00000025650	protein_coding	Col7a1	ENSMUST00000126780	retained_intron		9	1	108969693	2770
ENSMUSG00000025650	protein_coding	Col7a1	ENSMUST00000149142	retained_intron		9	1	108975336	654
ENSMUSG00000066272	protein_coding	Olfr559	ENSMUST00000215657	protein_coding	principal1	7	-1	102727491	1560
ENSMUSG00000066272	protein_coding	Olfr559	ENSMUST00000084816	protein_coding	principal1	7	-1	102724510	1022
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000133405	processed_transcript		3	1	108383851	680
ENSMUSG00000025650	protein_coding	Col7a1	ENSMUST00000198997	retained_intron		9	1	108982654	525
ENSMUSG00000040712	protein_coding	Camta2	ENSMUST00000100933	protein_coding	alternative2	11	-1	70687972	4383
ENSMUSG00000025650	protein_coding	Col7a1	ENSMUST00000138588	retained_intron		9	1	108982887	695
ENSMUSG00000025650	protein_coding	Col7a1	ENSMUST00000026740	protein_coding	principal1	9	1	108953745	9198
ENSMUSG00000040712	protein_coding	Camta2	ENSMUST00000108544	protein_coding	alternative2	11	-1	70688105	4632
ENSMUSG00000040712	protein_coding	Camta2	ENSMUST00000119120	protein_coding	alternative2	11	-1	70687955	4460
ENSMUSG00000059910	protein_coding	Olfr1265	ENSMUST00000214855	protein_coding	principal1	2	1	90035337	5701
ENSMUSG00000110077	TEC	Gm45632	ENSMUST00000211532	TEC		7	-1	105624704	1888
ENSMUSG00000059910	protein_coding	Olfr1265	ENSMUST00000080311	protein_coding	principal1	2	1	90036921	930
ENSMUSG00000040712	protein_coding	Camta2	ENSMUST00000125687	retained_intron		11	-1	70683776	4411
ENSMUSG00000063410	protein_coding	Stk24	ENSMUST00000079817	protein_coding	principal1	14	-1	121379334	2676
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000130906	processed_transcript		3	1	108383852	867
ENSMUSG00000040712	protein_coding	Camta2	ENSMUST00000150224	retained_intron		11	-1	70687948	411
ENSMUSG00000049699	protein_coding	Ucn2	ENSMUST00000052724	protein_coding	principal1	9	1	108986010	1155
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000102629	protein_coding	principal1	3	1	108383859	1687
ENSMUSG00000063410	protein_coding	Stk24	ENSMUST00000227273	processed_transcript		14	-1	121303475	759
ENSMUSG00000103811	lincRNA	Gm38004	ENSMUST00000192972	lincRNA		9	-1	108991570	357
ENSMUSG00000020052	protein_coding	Ascl1	ENSMUST00000020243	protein_coding	principal1	10	-1	87493660	2481
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000126461	processed_transcript		3	1	108383879	774
ENSMUSG00000063410	protein_coding	Stk24	ENSMUST00000226161	processed_transcript		14	-1	121359868	497
ENSMUSG00000063410	protein_coding	Stk24	ENSMUST00000227917	processed_transcript		14	-1	121380011	346
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000128089	protein_coding		3	1	108383916	868
ENSMUSG00000063410	protein_coding	Stk24	ENSMUST00000226158	retained_intron		14	-1	121379201	2661
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000145141	processed_transcript		3	1	108383937	1014
ENSMUSG00000090364	protein_coding	Gm3043	ENSMUST00000170639	protein_coding	principal1	14	1	3688783	821
ENSMUSG00000115666	processed_pseudogene	Gm49031	ENSMUST00000228299	processed_pseudogene		14	-1	121385956	452
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000143309	retained_intron		3	1	108384394	1013
ENSMUSG00000112460	processed_pseudogene	Gm48120	ENSMUST00000217737	processed_pseudogene		10	1	87507862	624
ENSMUSG00000115123	lincRNA	Gm33299	ENSMUST00000227451	lincRNA		14	-1	121455762	303
ENSMUSG00000096614	processed_pseudogene	Gm2871	ENSMUST00000179984	processed_pseudogene		14	1	3713109	1204
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000196430	retained_intron		3	1	108384854	2020
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000148509	retained_intron		3	1	108384857	872
ENSMUSG00000068744	protein_coding	Psrc1	ENSMUST00000128962	processed_transcript		3	1	108386065	556
ENSMUSG00000020882	protein_coding	Cacnb1	ENSMUST00000017552	protein_coding	principal4	11	-1	98022634	3396
ENSMUSG00000106870	TEC	Gm43681	ENSMUST00000201581	TEC		5	-1	93185758	1903
ENSMUSG00000081187	processed_pseudogene	3110067C02Rik	ENSMUST00000120793	processed_pseudogene		X	1	150463726	2117
ENSMUSG00000083700	processed_pseudogene	Gm2986	ENSMUST00000121603	processed_pseudogene		5	1	93195798	382
ENSMUSG00000075068	protein_coding	Olfr140	ENSMUST00000111506	protein_coding	principal1	2	-1	90063594	3449
ENSMUSG00000075068	protein_coding	Olfr140	ENSMUST00000216475	protein_coding	principal1	2	-1	90063594	3574
ENSMUSG00000075068	protein_coding	Olfr140	ENSMUST00000099757	protein_coding	principal1	2	-1	90052322	909
ENSMUSG00000059891	protein_coding	Tsks	ENSMUST00000207719	protein_coding		7	1	44943204	388
ENSMUSG00000046408	protein_coding	1700067K01Rik	ENSMUST00000060357	protein_coding	principal5	8	1	84001502	1291
ENSMUSG00000096450	processed_pseudogene	Gm2877	ENSMUST00000178248	processed_pseudogene		14	-1	3736963	1204
ENSMUSG00000020882	protein_coding	Cacnb1	ENSMUST00000107561	protein_coding		11	-1	98018372	1778
ENSMUSG00000046408	protein_coding	1700067K01Rik	ENSMUST00000174570	nonsense_mediated_decay		8	1	84001577	1171
ENSMUSG00000114713	processed_pseudogene	Gm9633	ENSMUST00000225643	processed_pseudogene		13	1	118047320	625
ENSMUSG00000046408	protein_coding	1700067K01Rik	ENSMUST00000239176	protein_coding	alternative2	8	1	84001577	1113
ENSMUSG00000046408	protein_coding	1700067K01Rik	ENSMUST00000140120	retained_intron		8	1	84002329	848
ENSMUSG00000095469	unprocessed_pseudogene	Gm21965	ENSMUST00000177770	unprocessed_pseudogene		14	1	3751771	384
ENSMUSG00000020882	protein_coding	Cacnb1	ENSMUST00000092736	protein_coding	alternative2	11	-1	98022634	1880
ENSMUSG00000020882	protein_coding	Cacnb1	ENSMUST00000107562	protein_coding		11	-1	98022634	1745
ENSMUSG00000111071	unprocessed_pseudogene	Olfr1266-ps1	ENSMUST00000214850	unprocessed_pseudogene		2	-1	90065994	180
ENSMUSG00000020882	protein_coding	Cacnb1	ENSMUST00000135462	processed_transcript		11	-1	98023034	886
ENSMUSG00000020882	protein_coding	Cacnb1	ENSMUST00000124170	processed_transcript		11	-1	98012551	721
ENSMUSG00000050377	protein_coding	Il31ra	ENSMUST00000223819	nonsense_mediated_decay		13	-1	112594360	2748
ENSMUSG00000038572	protein_coding	Bpifb5	ENSMUST00000045959	protein_coding	principal1	2	1	154223742	1637
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000170083	processed_transcript		5	1	143909964	5477
ENSMUSG00000020882	protein_coding	Cacnb1	ENSMUST00000103144	protein_coding		11	-1	98022627	2236
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000141942	retained_intron		5	1	143909964	6157
ENSMUSG00000086716	processed_transcript	Gm11629	ENSMUST00000123784	processed_transcript		11	1	98022955	384
ENSMUSG00000035861	protein_coding	Tmprss11b	ENSMUST00000038448	protein_coding	principal1	5	-1	86676362	4171
ENSMUSG00000103978	TEC	4930474B08Rik	ENSMUST00000194161	TEC		1	-1	90871419	837
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000110710	processed_transcript		5	1	143909990	2116
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000110707	processed_transcript		5	1	143909990	2757
ENSMUSG00000094597	processed_pseudogene	Gm4810	ENSMUST00000177721	processed_pseudogene		13	1	64509490	1607
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000147910	processed_transcript		5	1	143909999	702
ENSMUSG00000091756	protein_coding	Gm3095	ENSMUST00000164696	protein_coding	principal1	14	1	3963547	1568
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000168085	processed_transcript		5	1	143910004	396
ENSMUSG00000113609	processed_pseudogene	Gm47190	ENSMUST00000221158	processed_pseudogene		13	-1	64515854	412
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000154781	retained_intron		5	1	143910025	955
ENSMUSG00000096955	processed_pseudogene	Gm26570	ENSMUST00000180672	processed_pseudogene		14	-1	3839336	342
ENSMUSG00000034931	protein_coding	Dhx8	ENSMUST00000039152	protein_coding	principal1	11	1	101732950	4325
ENSMUSG00000113850	transcribed_processed_pseudogene	Gm47191	ENSMUST00000222752	processed_transcript		13	1	64611860	503
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000126331	retained_intron		5	1	143910025	2826
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000110709	protein_coding		5	1	143910057	1386
ENSMUSG00000113850	transcribed_processed_pseudogene	Gm47191	ENSMUST00000222525	transcribed_processed_pseudogene		13	1	64615414	411
ENSMUSG00000103219	antisense	Gm37787	ENSMUST00000192524	antisense		1	1	171634879	585
ENSMUSG00000034931	protein_coding	Dhx8	ENSMUST00000129741	protein_coding		11	1	101733041	3524
ENSMUSG00000093887	protein_coding	Gm3033	ENSMUST00000180934	protein_coding		14	1	3846245	1438
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000128153	processed_transcript		5	1	143910161	641
ENSMUSG00000034931	protein_coding	Dhx8	ENSMUST00000156842	retained_intron		11	1	101733029	444
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000128207	retained_intron		5	1	143913318	465
ENSMUSG00000093887	protein_coding	Gm3033	ENSMUST00000112792	protein_coding	principal1	14	1	3847027	438
ENSMUSG00000079109	protein_coding	Pms2	ENSMUST00000164999	protein_coding		5	1	143919579	521
ENSMUSG00000034205	protein_coding	Loxl2	ENSMUST00000022660	protein_coding	principal1	14	1	69609068	5316
ENSMUSG00000034931	protein_coding	Dhx8	ENSMUST00000141461	retained_intron		11	1	101751779	658
ENSMUSG00000113753	processed_pseudogene	Gm5791	ENSMUST00000220840	processed_pseudogene		13	-1	64624760	489
ENSMUSG00000034931	protein_coding	Dhx8	ENSMUST00000125409	retained_intron		11	1	101732919	675
ENSMUSG00000063015	protein_coding	Ccni	ENSMUST00000058550	protein_coding	principal1	5	-1	93206495	2804
ENSMUSG00000113124	lincRNA	Gm47193	ENSMUST00000222315	lincRNA		13	1	64619550	500
ENSMUSG00000091351	antisense	Gm17135	ENSMUST00000167009	antisense		5	-1	143980991	564
ENSMUSG00000096901	protein_coding	Gm3029	ENSMUST00000168306	protein_coding	principal5	14	1	3931756	984
ENSMUSG00000034205	protein_coding	Loxl2	ENSMUST00000100420	protein_coding	principal1	14	1	69609478	3042
ENSMUSG00000063015	protein_coding	Ccni	ENSMUST00000201823	protein_coding		5	-1	93189665	446
ENSMUSG00000096901	protein_coding	Gm3029	ENSMUST00000179327	protein_coding	alternative2	14	1	3931819	618
ENSMUSG00000106507	lincRNA	Gm43056	ENSMUST00000197865	lincRNA		5	-1	86686640	2791
ENSMUSG00000063015	protein_coding	Ccni	ENSMUST00000123033	retained_intron		5	-1	93188220	507
ENSMUSG00000096218	protein_coding	Gm2916	ENSMUST00000181779	protein_coding	principal1	14	1	3884172	1702
ENSMUSG00000025557	protein_coding	Slc15a1	ENSMUST00000088386	protein_coding	principal1	14	-1	121505252	3121
ENSMUSG00000096218	protein_coding	Gm2916	ENSMUST00000178392	protein_coding	principal1	14	1	3892557	384
ENSMUSG00000063015	protein_coding	Ccni	ENSMUST00000151568	protein_coding		5	-1	93203364	658
ENSMUSG00000036304	protein_coding	Zdhhc23	ENSMUST00000231700	protein_coding	principal1	16	-1	43979791	5751
ENSMUSG00000063015	protein_coding	Ccni	ENSMUST00000144514	protein_coding		5	-1	93206428	1068
ENSMUSG00000114168	lincRNA	Gm47194	ENSMUST00000221940	lincRNA		13	-1	64685275	452
ENSMUSG00000096793	protein_coding	Gm3002	ENSMUST00000170480	protein_coding	principal1	14	1	3810074	1955
ENSMUSG00000036304	protein_coding	Zdhhc23	ENSMUST00000232055	protein_coding		16	-1	43979162	1347
ENSMUSG00000040007	protein_coding	Bahd1	ENSMUST00000151162	protein_coding		2	1	118900377	662
ENSMUSG00000113405	processed_pseudogene	Gm4935	ENSMUST00000221316	processed_pseudogene		13	1	64673863	1198
ENSMUSG00000025557	protein_coding	Slc15a1	ENSMUST00000227372	retained_intron		14	-1	121492469	3229
ENSMUSG00000050377	protein_coding	Il31ra	ENSMUST00000051756	protein_coding	principal2	13	-1	112580662	3680
ENSMUSG00000096793	protein_coding	Gm3002	ENSMUST00000178256	protein_coding		14	1	3825596	444
ENSMUSG00000036304	protein_coding	Zdhhc23	ENSMUST00000165648	protein_coding	principal1	16	-1	43979050	1278
ENSMUSG00000097594	processed_pseudogene	Gm2907	ENSMUST00000181256	processed_pseudogene		14	-1	3877636	1192
ENSMUSG00000113469	processed_pseudogene	Gm7065	ENSMUST00000222150	processed_pseudogene		13	1	64703158	474
ENSMUSG00000050377	protein_coding	Il31ra	ENSMUST00000224510	protein_coding	alternative2	13	-1	112562074	2946
ENSMUSG00000097127	processed_transcript	Gm26886	ENSMUST00000181497	processed_transcript		14	-1	3884087	676
ENSMUSG00000097127	processed_transcript	Gm26886	ENSMUST00000180501	processed_transcript		14	-1	3884067	676
ENSMUSG00000042167	protein_coding	Tent2	ENSMUST00000225868	protein_coding	alternative1	13	-1	93192385	3081
ENSMUSG00000097127	processed_transcript	Gm26886	ENSMUST00000181772	processed_transcript		14	-1	3884074	2085
ENSMUSG00000036304	protein_coding	Zdhhc23	ENSMUST00000036321	protein_coding		16	-1	43979093	1380
ENSMUSG00000097127	processed_transcript	Gm26886	ENSMUST00000181007	processed_transcript		14	-1	3884074	1293
ENSMUSG00000042167	protein_coding	Tent2	ENSMUST00000048702	protein_coding	principal2	13	-1	93192283	2990
ENSMUSG00000050377	protein_coding	Il31ra	ENSMUST00000224576	nonsense_mediated_decay		13	-1	112562074	2928
ENSMUSG00000050377	protein_coding	Il31ra	ENSMUST00000223752	nonsense_mediated_decay		13	-1	112562074	2822
ENSMUSG00000042167	protein_coding	Tent2	ENSMUST00000223975	retained_intron		13	-1	93155206	502
ENSMUSG00000075067	polymorphic_pseudogene	Olfr1267-ps1	ENSMUST00000118957	polymorphic_pseudogene	principal1	2	-1	90086459	930
ENSMUSG00000042167	protein_coding	Tent2	ENSMUST00000226081	protein_coding		13	-1	93168429	602
ENSMUSG00000050377	protein_coding	Il31ra	ENSMUST00000223577	retained_intron		13	-1	112532344	660
ENSMUSG00000050377	protein_coding	Il31ra	ENSMUST00000224070	processed_transcript		13	-1	112594360	2727
ENSMUSG00000042167	protein_coding	Tent2	ENSMUST00000224545	nonsense_mediated_decay		13	-1	93192135	788
ENSMUSG00000050377	protein_coding	Il31ra	ENSMUST00000225397	protein_coding		13	-1	112565666	637
ENSMUSG00000042167	protein_coding	Tent2	ENSMUST00000224464	protein_coding		13	-1	93192111	821
ENSMUSG00000079487	protein_coding	Med12	ENSMUST00000117706	protein_coding	alternative2	X	1	101274030	6940
ENSMUSG00000038179	protein_coding	Slamf7	ENSMUST00000192195	protein_coding	principal3	1	-1	171653035	3975
ENSMUSG00000040007	protein_coding	Bahd1	ENSMUST00000036578	protein_coding	principal1	2	1	118901453	4594
ENSMUSG00000038179	protein_coding	Slamf7	ENSMUST00000192024	protein_coding	alternative2	1	-1	171648939	1361
ENSMUSG00000079487	protein_coding	Med12	ENSMUST00000117203	protein_coding	alternative2	X	1	101274229	6816
ENSMUSG00000038179	protein_coding	Slamf7	ENSMUST00000194531	protein_coding	alternative2	1	-1	171649007	1604
ENSMUSG00000075194	protein_coding	Olfr1049	ENSMUST00000216185	protein_coding	principal1	2	-1	86258328	1471
ENSMUSG00000043366	protein_coding	Olfr78	ENSMUST00000217123	protein_coding	principal1	7	-1	102746170	4695
ENSMUSG00000059891	protein_coding	Tsks	ENSMUST00000120929	protein_coding	alternative2	7	1	44943222	1843
ENSMUSG00000075194	protein_coding	Olfr1049	ENSMUST00000099899	protein_coding	principal1	2	-1	86255717	953
ENSMUSG00000038179	protein_coding	Slamf7	ENSMUST00000194791	protein_coding	alternative2	1	-1	171648927	909
ENSMUSG00000074916	protein_coding	Chst14	ENSMUST00000099546	protein_coding	principal1	2	1	118926496	2090
ENSMUSG00000038179	protein_coding	Slamf7	ENSMUST00000111276	protein_coding	principal3	1	-1	171649007	1082
ENSMUSG00000074916	protein_coding	Chst14	ENSMUST00000110837	protein_coding		2	1	118926514	1991
ENSMUSG00000026407	protein_coding	Cacna1s	ENSMUST00000160641	protein_coding	alternative2	1	1	136052750	6104
ENSMUSG00000022066	protein_coding	Entpd4b	ENSMUST00000185072	protein_coding	principal1	14	1	69555424	3589
ENSMUSG00000079487	protein_coding	Med12	ENSMUST00000087948	protein_coding	principal2	X	1	101274260	6809
ENSMUSG00000059891	protein_coding	Tsks	ENSMUST00000080233	protein_coding	principal3	7	1	44943261	1806
ENSMUSG00000022066	protein_coding	Entpd4b	ENSMUST00000183906	retained_intron		14	1	69555440	2946
ENSMUSG00000026407	protein_coding	Cacna1s	ENSMUST00000112068	protein_coding	alternative2	1	1	136052784	6018
ENSMUSG00000084802	antisense	Gm14089	ENSMUST00000130025	antisense		2	1	118997068	318
ENSMUSG00000022066	protein_coding	Entpd4b	ENSMUST00000064846	protein_coding		14	1	69555448	989
ENSMUSG00000059891	protein_coding	Tsks	ENSMUST00000208475	protein_coding		7	1	44954314	651
ENSMUSG00000079487	protein_coding	Med12	ENSMUST00000087956	protein_coding	alternative2	X	1	101274260	6746
ENSMUSG00000022066	protein_coding	Entpd4b	ENSMUST00000185174	processed_transcript		14	1	69555466	418
ENSMUSG00000026407	protein_coding	Cacna1s	ENSMUST00000161865	protein_coding		1	1	136073554	4923
ENSMUSG00000022066	protein_coding	Entpd4b	ENSMUST00000184506	retained_intron		14	1	69580809	2623
ENSMUSG00000081413	processed_pseudogene	Uqcrh-ps2	ENSMUST00000121613	processed_pseudogene		2	1	119008209	269
ENSMUSG00000079487	protein_coding	Med12	ENSMUST00000156131	retained_intron		X	1	101282696	802
ENSMUSG00000026407	protein_coding	Cacna1s	ENSMUST00000161700	retained_intron		1	1	136105406	795
ENSMUSG00000098975	antisense	Gm27177	ENSMUST00000183339	antisense		14	-1	69640274	2946
ENSMUSG00000079487	protein_coding	Med12	ENSMUST00000146877	processed_transcript		X	1	101283186	521
ENSMUSG00000098975	antisense	Gm27177	ENSMUST00000184034	antisense		14	-1	69640274	1911
ENSMUSG00000033837	protein_coding	Foxh1	ENSMUST00000037824	protein_coding	principal1	15	-1	76669948	1365
ENSMUSG00000026407	protein_coding	Cacna1s	ENSMUST00000159106	processed_transcript		1	1	136117256	1001
ENSMUSG00000098975	antisense	Gm27177	ENSMUST00000184792	antisense		14	-1	69640274	706
ENSMUSG00000033837	protein_coding	Foxh1	ENSMUST00000230207	processed_transcript		15	-1	76669802	507
ENSMUSG00000098975	antisense	Gm27177	ENSMUST00000184491	antisense		14	-1	69644752	602
ENSMUSG00000079487	protein_coding	Med12	ENSMUST00000148846	retained_intron		X	1	101286024	3273
ENSMUSG00000098975	antisense	Gm27177	ENSMUST00000183514	antisense		14	-1	69683286	2703
ENSMUSG00000043366	protein_coding	Olfr78	ENSMUST00000060187	protein_coding	principal1	7	-1	102759395	3410
ENSMUSG00000079487	protein_coding	Med12	ENSMUST00000132269	processed_transcript		X	1	101293134	881
ENSMUSG00000104371	TEC	Gm37513	ENSMUST00000194830	TEC		14	-1	69616046	2268
ENSMUSG00000026407	protein_coding	Cacna1s	ENSMUST00000112064	protein_coding	principal3	1	1	136052901	6251
ENSMUSG00000079487	protein_coding	Med12	ENSMUST00000137664	processed_transcript		X	1	101296569	448
ENSMUSG00000099027	antisense	Gm27176	ENSMUST00000183642	antisense		14	-1	69570509	961
ENSMUSG00000102717	antisense	Gm37759	ENSMUST00000194155	antisense		1	-1	136119822	3246
ENSMUSG00000043366	protein_coding	Olfr78	ENSMUST00000168007	protein_coding	principal1	7	-1	102759471	1962
ENSMUSG00000096056	processed_transcript	Gm21986	ENSMUST00000113671	processed_transcript		X	1	101295839	5560
ENSMUSG00000108321	antisense	Gm44649	ENSMUST00000206896	antisense		7	1	80751822	635
ENSMUSG00000043366	protein_coding	Olfr78	ENSMUST00000209365	processed_transcript		7	-1	102759395	1395
ENSMUSG00000108321	antisense	Gm44649	ENSMUST00000205608	antisense		7	1	80751845	364
ENSMUSG00000033423	protein_coding	Eri3	ENSMUST00000037127	protein_coding	principal1	4	1	117550365	1719
ENSMUSG00000110008	protein_coding	Olfr560	ENSMUST00000210453	protein_coding	principal1	7	-1	102759366	2168
ENSMUSG00000033423	protein_coding	Eri3	ENSMUST00000144373	protein_coding		4	1	117552610	830
ENSMUSG00000110008	protein_coding	Olfr560	ENSMUST00000232246	protein_coding		7	-1	102759366	2152
ENSMUSG00000110008	protein_coding	Olfr560	ENSMUST00000239110	protein_coding	principal1	7	-1	102759366	3323
ENSMUSG00000033423	protein_coding	Eri3	ENSMUST00000146384	processed_transcript		4	1	117564758	1336
ENSMUSG00000000916	protein_coding	Nsun5	ENSMUST00000000940	protein_coding	principal1	5	1	135369953	2243
ENSMUSG00000033423	protein_coding	Eri3	ENSMUST00000125312	protein_coding		4	1	117582687	596
ENSMUSG00000036989	protein_coding	Trim3	ENSMUST00000106791	protein_coding		7	-1	105633508	2466
ENSMUSG00000092454	processed_pseudogene	Gm2991	ENSMUST00000173338	processed_pseudogene		15	-1	65928933	480
ENSMUSG00000033423	protein_coding	Eri3	ENSMUST00000134453	processed_transcript		4	1	117589078	245
ENSMUSG00000000916	protein_coding	Nsun5	ENSMUST00000127746	processed_transcript		5	1	135369970	415
ENSMUSG00000033423	protein_coding	Eri3	ENSMUST00000134379	processed_transcript		4	1	117637338	1013
ENSMUSG00000082574	polymorphic_pseudogene	Olfr1268-ps1	ENSMUST00000117787	polymorphic_pseudogene	principal1	2	-1	90115023	2501
ENSMUSG00000000916	protein_coding	Nsun5	ENSMUST00000170342	nonsense_mediated_decay		5	1	135369975	385
ENSMUSG00000036989	protein_coding	Trim3	ENSMUST00000057525	protein_coding	principal1	7	-1	105633560	3016
ENSMUSG00000000916	protein_coding	Nsun5	ENSMUST00000202422	nonsense_mediated_decay		5	1	135369991	597
ENSMUSG00000089851	antisense	Gm16579	ENSMUST00000161985	antisense		5	1	86728899	2566
ENSMUSG00000000916	protein_coding	Nsun5	ENSMUST00000202792	retained_intron		5	1	135370577	1965
ENSMUSG00000036989	protein_coding	Trim3	ENSMUST00000106789	protein_coding	principal1	7	-1	105633537	2841
ENSMUSG00000105704	lincRNA	Gm43055	ENSMUST00000198859	lincRNA		5	1	86728906	879
ENSMUSG00000000916	protein_coding	Nsun5	ENSMUST00000141867	retained_intron		5	1	135370927	729
ENSMUSG00000000916	protein_coding	Nsun5	ENSMUST00000126454	retained_intron		5	1	135371059	668
ENSMUSG00000036989	protein_coding	Trim3	ENSMUST00000147044	protein_coding	principal1	7	-1	105633485	2972
ENSMUSG00000104937	lincRNA	Gm43057	ENSMUST00000196789	lincRNA		5	-1	86783033	429
ENSMUSG00000018042	protein_coding	Cyb5r3	ENSMUST00000162834	protein_coding		15	-1	83170177	1982
ENSMUSG00000031302	protein_coding	Nlgn3	ENSMUST00000118111	protein_coding		X	1	101299168	8004
ENSMUSG00000036989	protein_coding	Trim3	ENSMUST00000156581	retained_intron		7	-1	105611856	600
ENSMUSG00000000916	protein_coding	Nsun5	ENSMUST00000131863	retained_intron		5	1	135373642	1991
ENSMUSG00000036989	protein_coding	Trim3	ENSMUST00000154218	retained_intron		7	-1	105613406	697
ENSMUSG00000036989	protein_coding	Trim3	ENSMUST00000150363	retained_intron		7	-1	105618026	799
ENSMUSG00000000916	protein_coding	Nsun5	ENSMUST00000124453	retained_intron		5	1	135374179	952
ENSMUSG00000031302	protein_coding	Nlgn3	ENSMUST00000130555	protein_coding		X	1	101299175	1852
ENSMUSG00000036989	protein_coding	Trim3	ENSMUST00000153371	protein_coding		7	-1	105633525	1046
ENSMUSG00000031302	protein_coding	Nlgn3	ENSMUST00000151528	protein_coding	alternative1	X	1	101299194	8541
ENSMUSG00000036989	protein_coding	Trim3	ENSMUST00000140882	processed_transcript		7	-1	105633571	693
ENSMUSG00000018042	protein_coding	Cyb5r3	ENSMUST00000018186	protein_coding	principal1	15	-1	83172592	2422
ENSMUSG00000031302	protein_coding	Nlgn3	ENSMUST00000065858	protein_coding	principal2	X	1	101299210	8465
ENSMUSG00000021731	protein_coding	Mrps30	ENSMUST00000022245	protein_coding	principal1	13	-1	118387252	3319
ENSMUSG00000018042	protein_coding	Cyb5r3	ENSMUST00000162178	protein_coding		15	-1	83170506	2547
ENSMUSG00000031302	protein_coding	Nlgn3	ENSMUST00000147443	processed_transcript		X	1	101300474	747
ENSMUSG00000054537	protein_coding	Tmprss11e	ENSMUST00000161306	protein_coding	principal1	5	-1	86745815	3416
ENSMUSG00000116338	lincRNA	7530414M10Rik	ENSMUST00000229317	lincRNA		15	-1	83176445	1684
ENSMUSG00000021731	protein_coding	Mrps30	ENSMUST00000225170	retained_intron		13	-1	118386681	3803
ENSMUSG00000031302	protein_coding	Nlgn3	ENSMUST00000144860	processed_transcript		X	1	101314391	636
ENSMUSG00000116508	antisense	Gm49463	ENSMUST00000231106	antisense		15	1	83172350	2459
ENSMUSG00000097411	antisense	B430218F22Rik	ENSMUST00000238663	antisense		13	1	118386630	1494
ENSMUSG00000097411	antisense	B430218F22Rik	ENSMUST00000181168	antisense		13	1	118386630	1495
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000032169	protein_coding	principal1	6	-1	88841900	1845
ENSMUSG00000039710	protein_coding	Slc7a12	ENSMUST00000037321	protein_coding	principal1	3	1	14480697	1741
ENSMUSG00000056537	protein_coding	Rlim	ENSMUST00000121153	protein_coding	principal1	X	-1	103981284	7439
ENSMUSG00000056537	protein_coding	Rlim	ENSMUST00000070705	protein_coding	principal1	X	-1	103981284	7429
ENSMUSG00000072511	protein_coding	Hhla1	ENSMUST00000239034	protein_coding	alternative2	15	-1	65976804	2219
ENSMUSG00000084336	protein_coding	Olfr1269	ENSMUST00000214404	protein_coding	principal1	2	-1	90121412	3535
ENSMUSG00000056537	protein_coding	Rlim	ENSMUST00000135101	retained_intron		X	-1	103981284	1762
ENSMUSG00000072511	protein_coding	Hhla1	ENSMUST00000100584	protein_coding	principal2	15	-1	65976804	2262
ENSMUSG00000084336	protein_coding	Olfr1269	ENSMUST00000216493	protein_coding	principal1	2	-1	90121267	3827
ENSMUSG00000039710	protein_coding	Slc7a12	ENSMUST00000120484	protein_coding		3	1	14480700	1010
ENSMUSG00000084336	protein_coding	Olfr1269	ENSMUST00000099756	protein_coding	principal1	2	-1	90119617	1018
ENSMUSG00000039710	protein_coding	Slc7a12	ENSMUST00000120801	protein_coding		3	1	14480773	1069
ENSMUSG00000053293	protein_coding	Pom121	ENSMUST00000111171	protein_coding	principal1	5	-1	135394546	5580
ENSMUSG00000056952	protein_coding	Tatdn2	ENSMUST00000089018	protein_coding	principal3	6	1	113697050	3096
ENSMUSG00000056952	protein_coding	Tatdn2	ENSMUST00000204753	protein_coding	alternative2	6	1	113697564	2645
ENSMUSG00000056952	protein_coding	Tatdn2	ENSMUST00000113022	protein_coding	alternative2	6	1	113697673	2416
ENSMUSG00000056952	protein_coding	Tatdn2	ENSMUST00000153661	protein_coding		6	1	113704817	725
ENSMUSG00000022877	protein_coding	Hrg	ENSMUST00000023590	protein_coding	principal1	16	1	22951072	1734
ENSMUSG00000056952	protein_coding	Tatdn2	ENSMUST00000138420	protein_coding		6	1	113707276	711
ENSMUSG00000022877	protein_coding	Hrg	ENSMUST00000232422	protein_coding		16	1	22951100	868
ENSMUSG00000070319	protein_coding	Eif3g	ENSMUST00000004206	protein_coding	principal1	9	-1	20898623	1101
ENSMUSG00000114668	processed_pseudogene	Gm47563	ENSMUST00000225301	processed_pseudogene		13	-1	118510913	556
ENSMUSG00000070319	protein_coding	Eif3g	ENSMUST00000213454	retained_intron		9	-1	20898606	766
ENSMUSG00000073966	protein_coding	Olfr561	ENSMUST00000213432	protein_coding	principal1	7	1	102771221	2498
ENSMUSG00000062691	protein_coding	Cebpzos	ENSMUST00000180077	protein_coding	principal1	17	1	78916500	602
ENSMUSG00000070319	protein_coding	Eif3g	ENSMUST00000213882	retained_intron		9	-1	20896774	802
ENSMUSG00000073966	protein_coding	Olfr561	ENSMUST00000098217	protein_coding	principal1	7	1	102774495	1071
ENSMUSG00000070319	protein_coding	Eif3g	ENSMUST00000216133	retained_intron		9	-1	20898582	729
ENSMUSG00000062691	protein_coding	Cebpzos	ENSMUST00000063817	protein_coding	principal1	17	1	78916517	753
ENSMUSG00000086828	antisense	Gm15579	ENSMUST00000141299	antisense		7	1	143600134	757
ENSMUSG00000081431	processed_pseudogene	Gm15483	ENSMUST00000120338	processed_pseudogene		7	-1	133738934	456
ENSMUSG00000062691	protein_coding	Cebpzos	ENSMUST00000192288	protein_coding		17	1	78916700	443
ENSMUSG00000082544	processed_pseudogene	Gm11667	ENSMUST00000119828	processed_pseudogene		11	1	108423273	486
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000203137	nonsense_mediated_decay		6	-1	88841894	1774
ENSMUSG00000026303	protein_coding	Mlph	ENSMUST00000027528	protein_coding	principal1	1	1	90915085	4499
ENSMUSG00000026303	protein_coding	Mlph	ENSMUST00000125149	protein_coding		1	1	90927679	636
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000203272	nonsense_mediated_decay		6	-1	88841984	4556
ENSMUSG00000026303	protein_coding	Mlph	ENSMUST00000136220	retained_intron		1	1	90939169	863
ENSMUSG00000030536	protein_coding	Iqgap1	ENSMUST00000167377	protein_coding	principal1	7	-1	80803416	7444
ENSMUSG00000039179	protein_coding	Tekt5	ENSMUST00000043415	protein_coding	principal2	16	-1	10395490	1803
ENSMUSG00000015214	protein_coding	Mtmr1	ENSMUST00000146213	protein_coding		X	1	71364760	718
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000204560	retained_intron		6	-1	88838715	793
ENSMUSG00000030536	protein_coding	Iqgap1	ENSMUST00000205606	nonsense_mediated_decay		7	-1	80730248	569
ENSMUSG00000039179	protein_coding	Tekt5	ENSMUST00000115831	protein_coding	alternative2	16	-1	10395448	1277
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000020500	protein_coding	principal1	10	-1	83648738	3020
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000203120	nonsense_mediated_decay		6	-1	88838866	438
ENSMUSG00000030536	protein_coding	Iqgap1	ENSMUST00000205383	retained_intron		7	-1	80743880	2803
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000204327	nonsense_mediated_decay		6	-1	88839080	579
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000177187	protein_coding		10	-1	83603130	625
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000205082	nonsense_mediated_decay		6	-1	88839155	596
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000204458	nonsense_mediated_decay		6	-1	88841866	783
ENSMUSG00000025648	protein_coding	Pfkfb4	ENSMUST00000198140	protein_coding	principal1	9	1	108991778	3488
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000203514	retained_intron		6	-1	88839589	522
ENSMUSG00000025648	protein_coding	Pfkfb4	ENSMUST00000051873	protein_coding		9	1	108991902	3316
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000176675	nonsense_mediated_decay		10	-1	83609008	773
ENSMUSG00000045174	protein_coding	Amer3	ENSMUST00000052670	protein_coding	principal1	1	1	34579657	4392
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000203864	nonsense_mediated_decay		6	-1	88841882	645
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000141048	retained_intron		10	-1	83603384	427
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000203460	retained_intron		6	-1	88841830	715
ENSMUSG00000045815	antisense	1700101I19Rik	ENSMUST00000186712	antisense		1	-1	34579711	510
ENSMUSG00000045815	antisense	1700101I19Rik	ENSMUST00000062557	antisense		1	-1	34579613	390
ENSMUSG00000030083	protein_coding	Abtb1	ENSMUST00000204932	nonsense_mediated_decay		6	-1	88841935	465
ENSMUSG00000030536	protein_coding	Iqgap1	ENSMUST00000206149	retained_intron		7	-1	80803263	3629
ENSMUSG00000030536	protein_coding	Iqgap1	ENSMUST00000205824	retained_intron		7	-1	80803281	2307
ENSMUSG00000081904	processed_pseudogene	Gm13419	ENSMUST00000121711	processed_pseudogene		2	1	34830840	271
ENSMUSG00000020792	protein_coding	Exoc7	ENSMUST00000106411	protein_coding	alternative1	11	-1	116306734	3205
ENSMUSG00000015214	protein_coding	Mtmr1	ENSMUST00000114601	protein_coding	alternative2	X	1	71364760	4640
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000108375	protein_coding	alternative2	11	1	77763246	7513
ENSMUSG00000038914	protein_coding	Dido1	ENSMUST00000087517	protein_coding	principal4	2	-1	180702350	8723
ENSMUSG00000030536	protein_coding	Iqgap1	ENSMUST00000205813	protein_coding		7	-1	80816819	560
ENSMUSG00000107167	protein_coding	Gm34653	ENSMUST00000201786	protein_coding	principal1	2	1	34833007	1658
ENSMUSG00000020051	protein_coding	Pah	ENSMUST00000020241	protein_coding	principal1	10	1	87521795	2142
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000100795	retained_intron		11	1	77763301	3040
ENSMUSG00000030536	protein_coding	Iqgap1	ENSMUST00000205304	protein_coding		7	-1	80825974	484
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000193703	protein_coding	alternative2	1	-1	182019661	11229
ENSMUSG00000020792	protein_coding	Exoc7	ENSMUST00000106413	protein_coding	alternative1	11	-1	116306734	3298
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000164315	protein_coding		11	1	77765603	286
ENSMUSG00000038914	protein_coding	Dido1	ENSMUST00000103057	protein_coding	alternative2	2	-1	180709999	4906
ENSMUSG00000098449	antisense	Gm7467	ENSMUST00000185173	antisense		5	1	76304876	652
ENSMUSG00000020051	protein_coding	Pah	ENSMUST00000219813	protein_coding		10	1	87521930	789
ENSMUSG00000030536	protein_coding	Iqgap1	ENSMUST00000205540	retained_intron		7	-1	80803272	3367
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000108376	protein_coding		11	1	77766736	7374
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000111024	protein_coding	alternative2	1	-1	182019990	3572
ENSMUSG00000015214	protein_coding	Mtmr1	ENSMUST00000132837	protein_coding		X	1	71364937	928
ENSMUSG00000038914	protein_coding	Dido1	ENSMUST00000037764	protein_coding		2	-1	180675955	3570
ENSMUSG00000020792	protein_coding	Exoc7	ENSMUST00000021147	protein_coding	principal3	11	-1	116306734	3337
ENSMUSG00000020051	protein_coding	Pah	ENSMUST00000218573	protein_coding		10	1	87522027	630
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000102488	protein_coding	principal3	11	1	77772151	7409
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000130285	retained_intron		10	-1	83611881	1210
ENSMUSG00000108154	TEC	Gm44033	ENSMUST00000203699	TEC		6	1	113718584	695
ENSMUSG00000038914	protein_coding	Dido1	ENSMUST00000103056	protein_coding	alternative2	2	-1	180702350	4281
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000148096	retained_intron		10	-1	83611268	743
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000195703	retained_intron		1	-1	181908404	739
ENSMUSG00000020051	protein_coding	Pah	ENSMUST00000217864	protein_coding		10	1	87546673	538
ENSMUSG00000098092	processed_pseudogene	Gm2076	ENSMUST00000182524	processed_pseudogene		13	1	93293781	971
ENSMUSG00000097994	antisense	Gm26982	ENSMUST00000182250	antisense		6	1	113714971	1151
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000191649	retained_intron		1	-1	181906838	872
ENSMUSG00000038914	protein_coding	Dido1	ENSMUST00000103055	protein_coding		2	-1	180709999	4613
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000168348	protein_coding		11	1	77777293	6582
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000193074	protein_coding		1	-1	182014404	1971
ENSMUSG00000110122	polymorphic_pseudogene	Olfr562-ps1	ENSMUST00000210779	polymorphic_pseudogene	principal1	7	1	102781478	951
ENSMUSG00000073705	protein_coding	Cenps	ENSMUST00000105696	nonsense_mediated_decay		4	-1	149137548	412
ENSMUSG00000015214	protein_coding	Mtmr1	ENSMUST00000149323	protein_coding		X	1	71369812	397
ENSMUSG00000015214	protein_coding	Mtmr1	ENSMUST00000130909	protein_coding		X	1	71369812	448
ENSMUSG00000020792	protein_coding	Exoc7	ENSMUST00000139699	processed_transcript		11	-1	116306734	3449
ENSMUSG00000024081	protein_coding	Cebpz	ENSMUST00000024885	protein_coding	principal1	17	-1	78937066	4070
ENSMUSG00000015214	protein_coding	Mtmr1	ENSMUST00000156756	protein_coding		X	1	71369812	421
ENSMUSG00000010751	protein_coding	Tnfrsf22	ENSMUST00000075588	protein_coding	alternative2	7	-1	143649661	4170
ENSMUSG00000038914	protein_coding	Dido1	ENSMUST00000130986	protein_coding		2	-1	180702350	4898
ENSMUSG00000020792	protein_coding	Exoc7	ENSMUST00000141938	processed_transcript		11	-1	116290480	673
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000169105	protein_coding	alternative2	11	1	77777293	6475
ENSMUSG00000020792	protein_coding	Exoc7	ENSMUST00000155288	processed_transcript		11	-1	116291470	749
ENSMUSG00000010751	protein_coding	Tnfrsf22	ENSMUST00000146692	protein_coding	principal3	7	-1	143649661	2298
ENSMUSG00000015214	protein_coding	Mtmr1	ENSMUST00000156307	retained_intron		X	1	71391188	679
ENSMUSG00000038914	protein_coding	Dido1	ENSMUST00000103054	processed_transcript		2	-1	180701992	1636
ENSMUSG00000015214	protein_coding	Mtmr1	ENSMUST00000138565	retained_intron		X	1	71391689	515
ENSMUSG00000020792	protein_coding	Exoc7	ENSMUST00000136417	processed_transcript		11	-1	116297768	778
ENSMUSG00000024081	protein_coding	Cebpz	ENSMUST00000233484	nonsense_mediated_decay		17	-1	78937041	2920
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000130627	protein_coding		11	1	77777316	6202
ENSMUSG00000010751	protein_coding	Tnfrsf22	ENSMUST00000084396	protein_coding	principal3	7	-1	143649652	564
ENSMUSG00000020792	protein_coding	Exoc7	ENSMUST00000126731	protein_coding		11	-1	116306652	864
ENSMUSG00000010751	protein_coding	Tnfrsf22	ENSMUST00000171066	protein_coding		7	-1	143636585	1780
ENSMUSG00000024081	protein_coding	Cebpz	ENSMUST00000233371	retained_intron		17	-1	78922841	464
ENSMUSG00000015214	protein_coding	Mtmr1	ENSMUST00000130179	retained_intron		X	1	71393991	3355
ENSMUSG00000024081	protein_coding	Cebpz	ENSMUST00000233595	retained_intron		17	-1	78925984	454
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000100794	protein_coding		11	1	77801298	6182
ENSMUSG00000020792	protein_coding	Exoc7	ENSMUST00000133468	protein_coding		11	-1	116306727	370
ENSMUSG00000015214	protein_coding	Mtmr1	ENSMUST00000015358	protein_coding	principal2	X	1	71364760	4634
ENSMUSG00000064177	protein_coding	Ghrl	ENSMUST00000204533	protein_coding		6	-1	113717692	323
ENSMUSG00000024081	protein_coding	Cebpz	ENSMUST00000232899	processed_transcript		17	-1	78937037	530
ENSMUSG00000020792	protein_coding	Exoc7	ENSMUST00000124281	protein_coding		11	-1	116307233	429
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000147582	retained_intron		10	-1	83648670	3377
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000151373	protein_coding		11	1	77801337	1076
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000150351	retained_intron		10	-1	83611728	807
ENSMUSG00000045362	protein_coding	Tnfrsf26	ENSMUST00000208124	protein_coding		7	-1	143628722	3062
ENSMUSG00000075066	protein_coding	Olfr32	ENSMUST00000215659	protein_coding	principal1	2	-1	90142293	2998
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000127788	retained_intron		10	-1	83611102	614
ENSMUSG00000014786	protein_coding	Slc9a5	ENSMUST00000073149	protein_coding	principal1	8	1	105348843	3499
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000147118	processed_transcript		10	-1	83628302	530
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000130305	protein_coding		11	1	77801350	5450
ENSMUSG00000054383	protein_coding	Pnma1	ENSMUST00000061425	protein_coding	principal1	12	-1	84148489	2359
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000146876	protein_coding		10	-1	83648665	713
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000150685	nonsense_mediated_decay		10	-1	83648603	774
ENSMUSG00000073705	protein_coding	Cenps	ENSMUST00000030813	protein_coding	principal1	4	-1	149137629	1110
ENSMUSG00000075066	protein_coding	Olfr32	ENSMUST00000215153	protein_coding	principal1	2	-1	90142296	3117
ENSMUSG00000030986	protein_coding	Dhx32	ENSMUST00000033290	protein_coding	principal1	7	-1	133776803	2955
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000172303	protein_coding		11	1	77801350	6339
ENSMUSG00000064177	protein_coding	Ghrl	ENSMUST00000064993	protein_coding	principal3	6	-1	113719880	527
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000133719	processed_transcript		10	-1	83637443	961
ENSMUSG00000014786	protein_coding	Slc9a5	ENSMUST00000212772	retained_intron		8	1	105355462	3972
ENSMUSG00000035851	protein_coding	Ythdc1	ENSMUST00000119339	protein_coding	alternative2	5	1	86804221	3222
ENSMUSG00000020263	protein_coding	Appl2	ENSMUST00000176294	protein_coding		10	-1	83648675	380
ENSMUSG00000067998	protein_coding	Bpifb9a	ENSMUST00000147299	retained_intron		2	1	154257854	1864
ENSMUSG00000075066	protein_coding	Olfr32	ENSMUST00000099755	protein_coding	principal1	2	-1	90139195	1016
ENSMUSG00000073705	protein_coding	Cenps	ENSMUST00000177408	protein_coding		4	-1	149137569	689
ENSMUSG00000042523	protein_coding	Dnal1	ENSMUST00000143753	processed_transcript		12	1	84114366	1938
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000092884	protein_coding		11	1	77801375	5117
ENSMUSG00000045362	protein_coding	Tnfrsf26	ENSMUST00000055723	protein_coding	principal1	7	-1	143627953	3107
ENSMUSG00000073705	protein_coding	Cenps	ENSMUST00000132672	retained_intron		4	-1	149130456	686
ENSMUSG00000030986	protein_coding	Dhx32	ENSMUST00000140593	processed_transcript		7	-1	133760269	2998
ENSMUSG00000075066	protein_coding	Olfr32	ENSMUST00000213293	protein_coding		2	-1	90142293	791
ENSMUSG00000064177	protein_coding	Ghrl	ENSMUST00000203363	protein_coding		6	-1	113719458	400
ENSMUSG00000109251	antisense	E230032D23Rik	ENSMUST00000208797	antisense		7	1	143628024	856
ENSMUSG00000073705	protein_coding	Cenps	ENSMUST00000176124	protein_coding		4	-1	149137565	518
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000164334	protein_coding		11	1	77801375	5381
ENSMUSG00000035851	protein_coding	Ythdc1	ENSMUST00000120498	protein_coding	alternative2	5	1	86804233	3269
ENSMUSG00000030986	protein_coding	Dhx32	ENSMUST00000106139	protein_coding		7	-1	133776701	2233
ENSMUSG00000109251	antisense	E230032D23Rik	ENSMUST00000207959	antisense		7	1	143628074	451
ENSMUSG00000064177	protein_coding	Ghrl	ENSMUST00000203770	protein_coding	principal3	6	-1	113719848	891
ENSMUSG00000075066	protein_coding	Olfr32	ENSMUST00000214973	protein_coding		2	-1	90142293	900
ENSMUSG00000073705	protein_coding	Cenps	ENSMUST00000150150	protein_coding		4	-1	149132635	349
ENSMUSG00000109251	antisense	E230032D23Rik	ENSMUST00000207189	antisense		7	1	143628281	848
ENSMUSG00000030986	protein_coding	Dhx32	ENSMUST00000063669	protein_coding	principal1	7	-1	133782726	2644
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000167856	protein_coding		11	1	77811515	6132
ENSMUSG00000064177	protein_coding	Ghrl	ENSMUST00000204163	protein_coding	alternative1	6	-1	113719447	447
ENSMUSG00000073705	protein_coding	Cenps	ENSMUST00000105695	protein_coding		4	-1	149137577	544
ENSMUSG00000075066	protein_coding	Olfr32	ENSMUST00000215765	protein_coding	principal1	2	-1	90142293	1241
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000154892	processed_transcript		11	1	77824554	325
ENSMUSG00000064177	protein_coding	Ghrl	ENSMUST00000203588	protein_coding		6	-1	113719429	237
ENSMUSG00000030986	protein_coding	Dhx32	ENSMUST00000136301	processed_transcript		7	-1	133730900	698
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000134196	processed_transcript		11	1	77838087	332
ENSMUSG00000030986	protein_coding	Dhx32	ENSMUST00000211450	processed_transcript		7	-1	133776616	673
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000100443	retained_intron		11	1	77840933	3807
ENSMUSG00000110074	unprocessed_pseudogene	Olfr563-ps1	ENSMUST00000210909	unprocessed_pseudogene		7	1	102791250	873
ENSMUSG00000064177	protein_coding	Ghrl	ENSMUST00000204191	retained_intron		6	-1	113719454	278
ENSMUSG00000030986	protein_coding	Dhx32	ENSMUST00000146211	retained_intron		7	-1	133759472	546
ENSMUSG00000039372	protein_coding	Marchf4	ENSMUST00000047786	protein_coding	principal1	1	-1	72536930	4553
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000135045	retained_intron		11	1	77849451	496
ENSMUSG00000030986	protein_coding	Dhx32	ENSMUST00000149876	protein_coding		7	-1	133759829	558
ENSMUSG00000090550	protein_coding	Prlh	ENSMUST00000166281	protein_coding	principal1	1	1	90953108	276
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000130956	retained_intron		11	1	77850656	337
ENSMUSG00000030986	protein_coding	Dhx32	ENSMUST00000130182	protein_coding		7	-1	133776687	769
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000135375	protein_coding		11	1	77853864	2014
ENSMUSG00000080746	processed_pseudogene	Rpsa-ps12	ENSMUST00000120596	processed_pseudogene		4	-1	149143388	892
ENSMUSG00000085812	processed_pseudogene	Gm15843	ENSMUST00000146593	processed_pseudogene		1	1	72459499	529
ENSMUSG00000030986	protein_coding	Dhx32	ENSMUST00000135989	protein_coding		7	-1	133776509	604
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000142571	retained_intron		11	1	77857479	753
ENSMUSG00000075706	protein_coding	Gpx4	ENSMUST00000144698	processed_transcript		10	1	80047166	879
ENSMUSG00000083969	unprocessed_pseudogene	Olfr1050-ps1	ENSMUST00000119802	unprocessed_pseudogene		2	-1	86268825	947
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000092887	protein_coding	principal3	11	1	77777265	7304
ENSMUSG00000006574	protein_coding	Slc4a1	ENSMUST00000006749	protein_coding	principal1	11	-1	102365280	4545
ENSMUSG00000067998	protein_coding	Bpifb9a	ENSMUST00000088924	protein_coding	principal1	2	1	154257854	2065
ENSMUSG00000035851	protein_coding	Ythdc1	ENSMUST00000156363	nonsense_mediated_decay		5	1	86804496	4346
ENSMUSG00000037613	protein_coding	Tnfrsf23	ENSMUST00000035742	nonsense_mediated_decay		7	-1	143685872	3353
ENSMUSG00000033054	protein_coding	Npat	ENSMUST00000035850	protein_coding	principal1	9	1	53537047	6062
ENSMUSG00000030979	protein_coding	Uros	ENSMUST00000135760	retained_intron		7	-1	133709094	2189
ENSMUSG00000067998	protein_coding	Bpifb9a	ENSMUST00000126084	processed_transcript		2	1	154267682	462
ENSMUSG00000000631	protein_coding	Myo18a	ENSMUST00000000645	protein_coding		11	1	77777265	7307
ENSMUSG00000006574	protein_coding	Slc4a1	ENSMUST00000149993	processed_transcript		11	-1	102360568	357
ENSMUSG00000035851	protein_coding	Ythdc1	ENSMUST00000038384	protein_coding	principal3	5	1	86804564	2960
ENSMUSG00000033054	protein_coding	Npat	ENSMUST00000148336	retained_intron		9	1	53563534	554
ENSMUSG00000069804	protein_coding	Gm10277	ENSMUST00000092883	protein_coding	principal1	11	-1	77787747	2295
ENSMUSG00000075193	protein_coding	Olfr1051	ENSMUST00000216432	protein_coding	principal1	2	-1	86279088	2807
ENSMUSG00000078087	processed_pseudogene	Rps12l1	ENSMUST00000183090	processed_pseudogene		7	1	56014016	399
ENSMUSG00000103083	processed_transcript	A630035G10Rik	ENSMUST00000194468	lincRNA		1	-1	171681933	1065
ENSMUSG00000103083	processed_transcript	A630035G10Rik	ENSMUST00000194143	retained_intron		1	-1	171681980	1869
ENSMUSG00000075193	protein_coding	Olfr1051	ENSMUST00000217294	protein_coding	principal1	2	-1	86279002	2840
ENSMUSG00000006574	protein_coding	Slc4a1	ENSMUST00000145636	processed_transcript		11	-1	102363704	356
ENSMUSG00000035851	protein_coding	Ythdc1	ENSMUST00000198167	retained_intron		5	1	86806411	3335
ENSMUSG00000037613	protein_coding	Tnfrsf23	ENSMUST00000152703	protein_coding	principal1	7	-1	143685872	1476
ENSMUSG00000103137	processed_pseudogene	Gm37981	ENSMUST00000194280	processed_pseudogene		1	-1	171679870	535
ENSMUSG00000075193	protein_coding	Olfr1051	ENSMUST00000217245	protein_coding	principal1	2	-1	86279017	2821
ENSMUSG00000006574	protein_coding	Slc4a1	ENSMUST00000128405	processed_transcript		11	-1	102365247	495
ENSMUSG00000110507	lincRNA	8030455M16Rik	ENSMUST00000213014	lincRNA		8	1	110047432	902
ENSMUSG00000006574	protein_coding	Slc4a1	ENSMUST00000151050	processed_transcript		11	-1	102366203	218
ENSMUSG00000037613	protein_coding	Tnfrsf23	ENSMUST00000208017	protein_coding		7	-1	143685871	544
ENSMUSG00000075193	protein_coding	Olfr1051	ENSMUST00000099898	protein_coding	principal1	2	-1	86276485	927
ENSMUSG00000035851	protein_coding	Ythdc1	ENSMUST00000151489	retained_intron		5	1	86815655	6313
ENSMUSG00000047037	protein_coding	Nipa1	ENSMUST00000052204	protein_coding	principal1	7	-1	56019954	3183
ENSMUSG00000037613	protein_coding	Tnfrsf23	ENSMUST00000208613	retained_intron		7	-1	143685872	700
ENSMUSG00000035851	protein_coding	Ythdc1	ENSMUST00000148142	retained_intron		5	1	86823185	4006
ENSMUSG00000103883	TEC	Gm37010	ENSMUST00000194539	TEC		1	1	171688311	1704
ENSMUSG00000035851	protein_coding	Ythdc1	ENSMUST00000124123	processed_transcript		5	1	86829318	593
ENSMUSG00000108358	TEC	Gm44509	ENSMUST00000205400	TEC		7	-1	55974842	1324
ENSMUSG00000047149	protein_coding	Olfr1052	ENSMUST00000215090	protein_coding	principal1	2	1	86296817	1526
ENSMUSG00000035851	protein_coding	Ythdc1	ENSMUST00000123625	retained_intron		5	1	86831763	1246
ENSMUSG00000047149	protein_coding	Olfr1052	ENSMUST00000217166	protein_coding	principal1	2	1	86292455	1694
ENSMUSG00000106574	processed_pseudogene	Gm2451	ENSMUST00000199447	processed_pseudogene		3	1	139649379	999
ENSMUSG00000087178	processed_transcript	A230056P14Rik	ENSMUST00000149506	processed_transcript		7	1	55962531	468
ENSMUSG00000104992	processed_pseudogene	Gm43163	ENSMUST00000196571	processed_pseudogene		3	1	139411795	442
ENSMUSG00000047149	protein_coding	Olfr1052	ENSMUST00000054746	protein_coding	principal1	2	1	86297817	940
ENSMUSG00000087178	processed_transcript	A230056P14Rik	ENSMUST00000130189	processed_transcript		7	1	55962531	2177
ENSMUSG00000033557	protein_coding	Fam20b	ENSMUST00000122424	protein_coding	principal1	1	-1	156719072	4532
ENSMUSG00000108443	TEC	Gm44510	ENSMUST00000206288	TEC		7	-1	56017479	4532
ENSMUSG00000042523	protein_coding	Dnal1	ENSMUST00000123491	protein_coding	principal1	12	1	84114366	5727
ENSMUSG00000108640	TEC	Gm44508	ENSMUST00000206943	TEC		7	-1	55995170	1157
ENSMUSG00000025648	protein_coding	Pfkfb4	ENSMUST00000198277	retained_intron		9	1	108991948	439
ENSMUSG00000015355	protein_coding	Cd48	ENSMUST00000015499	protein_coding		1	1	171682009	922
ENSMUSG00000032816	protein_coding	Igdcc4	ENSMUST00000213533	protein_coding	alternative2	9	1	65101486	6220
ENSMUSG00000033557	protein_coding	Fam20b	ENSMUST00000086153	protein_coding	principal1	1	-1	156719086	4414
ENSMUSG00000025648	protein_coding	Pfkfb4	ENSMUST00000199620	retained_intron		9	1	108991992	910
ENSMUSG00000025648	protein_coding	Pfkfb4	ENSMUST00000196249	nonsense_mediated_decay		9	1	108992016	1751
ENSMUSG00000085927	processed_transcript	Gm15888	ENSMUST00000154016	processed_transcript		7	1	55979927	538
ENSMUSG00000026171	protein_coding	Rnf25	ENSMUST00000135140	nonsense_mediated_decay		1	-1	74601372	1507
ENSMUSG00000032816	protein_coding	Igdcc4	ENSMUST00000035499	protein_coding	principal2	9	1	65101486	6223
ENSMUSG00000042523	protein_coding	Dnal1	ENSMUST00000046340	protein_coding		12	1	84114371	790
ENSMUSG00000099013	antisense	Gm27153	ENSMUST00000184492	antisense		15	1	66074552	407
ENSMUSG00000033557	protein_coding	Fam20b	ENSMUST00000190878	retained_intron		1	-1	156698885	817
ENSMUSG00000025648	protein_coding	Pfkfb4	ENSMUST00000199591	nonsense_mediated_decay		9	1	108992016	1712
ENSMUSG00000074217	protein_coding	Misp3	ENSMUST00000190457	protein_coding	principal1	8	-1	84012158	1351
ENSMUSG00000033557	protein_coding	Fam20b	ENSMUST00000188941	processed_transcript		1	-1	156703794	752
ENSMUSG00000032816	protein_coding	Igdcc4	ENSMUST00000216542	processed_transcript		9	1	65101495	1131
ENSMUSG00000033557	protein_coding	Fam20b	ENSMUST00000147931	retained_intron		1	-1	156716982	4621
ENSMUSG00000025648	protein_coding	Pfkfb4	ENSMUST00000199184	retained_intron		9	1	108992016	1841
ENSMUSG00000015355	protein_coding	Cd48	ENSMUST00000068584	protein_coding	principal1	1	1	171682010	1186
ENSMUSG00000074217	protein_coding	Misp3	ENSMUST00000056686	protein_coding		8	-1	84011411	525
ENSMUSG00000042523	protein_coding	Dnal1	ENSMUST00000156138	nonsense_mediated_decay		12	1	84114390	3021
ENSMUSG00000032816	protein_coding	Igdcc4	ENSMUST00000213423	retained_intron		9	1	65101523	2572
ENSMUSG00000102961	TEC	Gm19918	ENSMUST00000194858	TEC		1	1	156678545	400
ENSMUSG00000042523	protein_coding	Dnal1	ENSMUST00000136159	protein_coding		12	1	84114391	403
ENSMUSG00000074217	protein_coding	Misp3	ENSMUST00000188195	protein_coding		8	-1	84011411	326
ENSMUSG00000032816	protein_coding	Igdcc4	ENSMUST00000214978	retained_intron		9	1	65101535	4130
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000078719	protein_coding		1	-1	182019661	2889
ENSMUSG00000025648	protein_coding	Pfkfb4	ENSMUST00000200229	processed_transcript		9	1	108998888	811
ENSMUSG00000042523	protein_coding	Dnal1	ENSMUST00000143711	retained_intron		12	1	84126904	818
ENSMUSG00000057945	processed_pseudogene	Gm17136	ENSMUST00000169993	processed_pseudogene		7	1	126176124	411
ENSMUSG00000083732	processed_pseudogene	Gm14197	ENSMUST00000117480	processed_pseudogene		2	-1	154285261	1049
ENSMUSG00000074217	protein_coding	Misp3	ENSMUST00000185457	protein_coding		8	-1	84012171	385
ENSMUSG00000042523	protein_coding	Dnal1	ENSMUST00000140812	protein_coding		12	1	84135666	637
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000195059	protein_coding	alternative2	1	-1	182019661	2832
ENSMUSG00000025648	protein_coding	Pfkfb4	ENSMUST00000200015	nonsense_mediated_decay		9	1	109011186	591
ENSMUSG00000074217	protein_coding	Misp3	ENSMUST00000191523	protein_coding		8	-1	84012156	340
ENSMUSG00000025648	protein_coding	Pfkfb4	ENSMUST00000198763	processed_transcript		9	1	109017380	2446
ENSMUSG00000056258	protein_coding	Kcnq3	ENSMUST00000070256	protein_coding	principal1	15	-1	66286642	11824
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000111030	protein_coding	principal4	1	-1	182019661	2844
ENSMUSG00000056258	protein_coding	Kcnq3	ENSMUST00000183354	processed_transcript		15	-1	66103254	666
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000195788	retained_intron		1	-1	181917360	556
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000192768	retained_intron		1	-1	181912597	1890
ENSMUSG00000056258	protein_coding	Kcnq3	ENSMUST00000183633	retained_intron		15	-1	66286051	2979
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000192967	protein_coding		1	-1	181923764	687
ENSMUSG00000032816	protein_coding	Igdcc4	ENSMUST00000077696	protein_coding		9	1	65101486	6361
ENSMUSG00000053769	protein_coding	Lysmd1	ENSMUST00000066386	protein_coding	principal1	3	1	95134088	2394
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000195840	retained_intron		1	-1	181956512	846
ENSMUSG00000048483	protein_coding	Zdhhc22	ENSMUST00000222543	protein_coding	principal1	12	-1	86990430	3462
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000195461	retained_intron		1	-1	181940585	5962
ENSMUSG00000048483	protein_coding	Zdhhc22	ENSMUST00000223336	retained_intron		12	-1	86983835	682
ENSMUSG00000013707	protein_coding	Tnfaip8l2	ENSMUST00000013851	protein_coding	principal1	3	-1	95142360	1122
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000192497	retained_intron		1	-1	182019676	774
ENSMUSG00000030979	protein_coding	Uros	ENSMUST00000106146	protein_coding	principal1	7	-1	133708958	1483
ENSMUSG00000048483	protein_coding	Zdhhc22	ENSMUST00000095521	protein_coding	principal1	12	-1	86988676	792
ENSMUSG00000098198	processed_pseudogene	Gm9169	ENSMUST00000182930	processed_pseudogene		3	1	95144371	536
ENSMUSG00000086264	processed_transcript	Gm15850	ENSMUST00000134998	processed_transcript		1	-1	136131183	2049
ENSMUSG00000047940	protein_coding	Stpg2	ENSMUST00000106239	protein_coding	principal1	3	1	139205694	2055
ENSMUSG00000032816	protein_coding	Igdcc4	ENSMUST00000166273	protein_coding		9	1	65101535	778
ENSMUSG00000047940	protein_coding	Stpg2	ENSMUST00000062306	protein_coding	principal1	3	1	139205893	2818
ENSMUSG00000086264	processed_transcript	Gm15850	ENSMUST00000166747	processed_transcript		1	-1	136131171	329
ENSMUSG00000086264	processed_transcript	Gm15850	ENSMUST00000146091	processed_transcript		1	-1	136131171	332
ENSMUSG00000030979	protein_coding	Uros	ENSMUST00000106145	protein_coding	principal1	7	-1	133709069	1644
ENSMUSG00000086264	processed_transcript	Gm15850	ENSMUST00000165464	processed_transcript		1	-1	136131171	493
ENSMUSG00000115390	lincRNA	Gm49035	ENSMUST00000227974	lincRNA		14	-1	121519130	824
ENSMUSG00000115390	lincRNA	Gm49035	ENSMUST00000226732	lincRNA		14	-1	121519112	835
ENSMUSG00000106505	lincRNA	Gm32693	ENSMUST00000196538	lincRNA		3	-1	139780759	2402
ENSMUSG00000115180	lincRNA	Gm30556	ENSMUST00000227953	lincRNA		14	1	34119596	409
ENSMUSG00000115408	processed_pseudogene	Gm4529	ENSMUST00000226518	processed_pseudogene		14	1	121523544	205
ENSMUSG00000105880	lincRNA	Gm43678	ENSMUST00000197774	lincRNA		3	-1	139812764	328
ENSMUSG00000115101	processed_pseudogene	Gm7778	ENSMUST00000227054	processed_pseudogene		14	1	34139448	368
ENSMUSG00000030979	protein_coding	Uros	ENSMUST00000033276	protein_coding	principal1	7	-1	133709281	1762
ENSMUSG00000020677	protein_coding	Ddx52	ENSMUST00000049257	protein_coding	principal1	11	1	83942062	3194
ENSMUSG00000105180	processed_pseudogene	Gm4863	ENSMUST00000196907	processed_pseudogene		3	-1	140118035	1381
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000177811	protein_coding		1	-1	182019980	4231
ENSMUSG00000030979	protein_coding	Uros	ENSMUST00000144789	processed_transcript		7	-1	133698080	598
ENSMUSG00000020677	protein_coding	Ddx52	ENSMUST00000130982	processed_transcript		11	1	83946255	553
ENSMUSG00000030979	protein_coding	Uros	ENSMUST00000106144	protein_coding		7	-1	133709059	1045
ENSMUSG00000001120	protein_coding	Pcbp3	ENSMUST00000001148	protein_coding	principal3	10	-1	76961788	2013
ENSMUSG00000048337	protein_coding	Npy4r	ENSMUST00000052164	protein_coding	principal1	14	-1	34152489	3627
ENSMUSG00000030979	protein_coding	Uros	ENSMUST00000209636	protein_coding		7	-1	133702538	323
ENSMUSG00000033063	protein_coding	Cntnap3	ENSMUST00000091554	protein_coding	principal1	13	-1	64903955	6344
ENSMUSG00000032131	protein_coding	Abcg4	ENSMUST00000159385	retained_intron		9	-1	44278614	2801
ENSMUSG00000030979	protein_coding	Uros	ENSMUST00000153698	protein_coding		7	-1	133702616	371
ENSMUSG00000022995	protein_coding	Enah	ENSMUST00000111025	protein_coding		1	-1	182019980	3385
ENSMUSG00000033063	protein_coding	Cntnap3	ENSMUST00000222618	retained_intron		13	-1	64758461	701
ENSMUSG00000030979	protein_coding	Uros	ENSMUST00000124759	protein_coding		7	-1	133709057	352
ENSMUSG00000075192	protein_coding	Olfr1053	ENSMUST00000099897	protein_coding	principal1	2	-1	86315284	942
ENSMUSG00000078126	processed_pseudogene	Rpl23a-ps3	ENSMUST00000104925	processed_pseudogene		14	1	34170655	468
ENSMUSG00000030979	protein_coding	Uros	ENSMUST00000151348	protein_coding		7	-1	133710072	512
ENSMUSG00000102950	TEC	Gm37018	ENSMUST00000192441	TEC		1	-1	181990204	3869
ENSMUSG00000103317	TEC	Gm38359	ENSMUST00000191884	TEC		1	-1	181969923	2225
ENSMUSG00000115673	processed_pseudogene	Gm18884	ENSMUST00000228606	processed_pseudogene		14	-1	34176309	579
ENSMUSG00000102760	TEC	Gm37258	ENSMUST00000191734	TEC		1	-1	182007686	1627
ENSMUSG00000001120	protein_coding	Pcbp3	ENSMUST00000168505	processed_transcript		10	-1	76822797	1736
ENSMUSG00000001120	protein_coding	Pcbp3	ENSMUST00000105411	protein_coding	alternative2	10	-1	76961887	2544
ENSMUSG00000030983	protein_coding	Bccip	ENSMUST00000033282	protein_coding	principal1	7	1	133709333	1244
ENSMUSG00000001120	protein_coding	Pcbp3	ENSMUST00000168240	processed_transcript		10	-1	76797864	1095
ENSMUSG00000001120	protein_coding	Pcbp3	ENSMUST00000173854	protein_coding		10	-1	76788422	605
ENSMUSG00000030983	protein_coding	Bccip	ENSMUST00000157077	retained_intron		7	1	133709348	804
ENSMUSG00000001120	protein_coding	Pcbp3	ENSMUST00000092393	nonsense_mediated_decay		10	-1	76816706	944
ENSMUSG00000030983	protein_coding	Bccip	ENSMUST00000132885	retained_intron		7	1	133709402	253
ENSMUSG00000042554	protein_coding	Zp3r	ENSMUST00000039862	protein_coding	principal2	1	-1	130629621	2042
ENSMUSG00000001120	protein_coding	Pcbp3	ENSMUST00000171437	processed_transcript		10	-1	76905862	717
ENSMUSG00000030983	protein_coding	Bccip	ENSMUST00000151711	processed_transcript		7	1	133714742	825
ENSMUSG00000001120	protein_coding	Pcbp3	ENSMUST00000165571	processed_transcript		10	-1	76819407	337
ENSMUSG00000030983	protein_coding	Bccip	ENSMUST00000140472	retained_intron		7	1	133717379	520
ENSMUSG00000020897	protein_coding	Aurkb	ENSMUST00000108666	protein_coding	principal1	11	1	69045647	1831
ENSMUSG00000042554	protein_coding	Zp3r	ENSMUST00000128128	protein_coding	alternative2	1	-1	130629621	1926
ENSMUSG00000001120	protein_coding	Pcbp3	ENSMUST00000168465	protein_coding	principal3	10	-1	76825869	1748
ENSMUSG00000042554	protein_coding	Zp3r	ENSMUST00000142416	protein_coding		1	-1	130629612	1835
ENSMUSG00000100524	processed_pseudogene	Gm28418	ENSMUST00000186179	processed_pseudogene		1	-1	34607719	423
ENSMUSG00000020897	protein_coding	Aurkb	ENSMUST00000021277	protein_coding	principal1	11	1	69045652	1950
ENSMUSG00000102499	processed_pseudogene	Gm36984	ENSMUST00000192770	processed_pseudogene		1	-1	34610806	235
ENSMUSG00000020897	protein_coding	Aurkb	ENSMUST00000139457	processed_transcript		11	1	69045671	615
ENSMUSG00000020897	protein_coding	Aurkb	ENSMUST00000126576	retained_intron		11	1	69045690	831
ENSMUSG00000020897	protein_coding	Aurkb	ENSMUST00000139594	retained_intron		11	1	69047977	879
ENSMUSG00000020897	protein_coding	Aurkb	ENSMUST00000156373	retained_intron		11	1	69048528	462
ENSMUSG00000020897	protein_coding	Aurkb	ENSMUST00000149018	retained_intron		11	1	69048569	661
ENSMUSG00000029384	protein_coding	2010109A12Rik	ENSMUST00000031330	protein_coding	principal1	5	1	93206518	549
ENSMUSG00000020897	protein_coding	Aurkb	ENSMUST00000140531	processed_transcript		11	1	69050563	393
ENSMUSG00000029384	protein_coding	2010109A12Rik	ENSMUST00000201993	retained_intron		5	1	93206533	917
ENSMUSG00000103521	processed_pseudogene	Gm29730	ENSMUST00000192986	processed_pseudogene		1	-1	34612303	1396
ENSMUSG00000104098	processed_pseudogene	AA619741	ENSMUST00000195095	processed_pseudogene		1	-1	34636189	646
ENSMUSG00000026171	protein_coding	Rnf25	ENSMUST00000027357	protein_coding	principal3	1	-1	74601397	1479
ENSMUSG00000026171	protein_coding	Rnf25	ENSMUST00000113721	protein_coding	alternative1	1	-1	74601377	1451
ENSMUSG00000026171	protein_coding	Rnf25	ENSMUST00000149649	retained_intron		1	-1	74594801	423
ENSMUSG00000026171	protein_coding	Rnf25	ENSMUST00000127938	protein_coding		1	-1	74600564	812
ENSMUSG00000086322	protein_coding	E130218I03Rik	ENSMUST00000135228	protein_coding	principal1	4	1	134243662	544
ENSMUSG00000086322	protein_coding	E130218I03Rik	ENSMUST00000144222	protein_coding	principal1	4	1	134243763	1729
ENSMUSG00000026171	protein_coding	Rnf25	ENSMUST00000154874	protein_coding		1	-1	74600599	422
ENSMUSG00000086322	protein_coding	E130218I03Rik	ENSMUST00000124452	nonsense_mediated_decay		4	1	134243763	958
ENSMUSG00000026171	protein_coding	Rnf25	ENSMUST00000151003	retained_intron		1	-1	74598597	315
ENSMUSG00000026171	protein_coding	Rnf25	ENSMUST00000136078	protein_coding		1	-1	74601345	369
ENSMUSG00000086322	protein_coding	E130218I03Rik	ENSMUST00000143448	protein_coding	principal1	4	1	134243776	591
ENSMUSG00000009640	protein_coding	Dmap1	ENSMUST00000135582	processed_transcript		4	-1	117682253	1771
ENSMUSG00000053111	protein_coding	Fank1	ENSMUST00000065359	protein_coding	principal1	7	1	133776861	2004
ENSMUSG00000026171	protein_coding	Rnf25	ENSMUST00000128491	retained_intron		1	-1	74601394	388
ENSMUSG00000086322	protein_coding	E130218I03Rik	ENSMUST00000125921	protein_coding	principal1	4	1	134243776	666
ENSMUSG00000053111	protein_coding	Fank1	ENSMUST00000209511	protein_coding		7	1	133776868	1392
ENSMUSG00000026171	protein_coding	Rnf25	ENSMUST00000132081	protein_coding		1	-1	74601365	304
ENSMUSG00000086322	protein_coding	E130218I03Rik	ENSMUST00000122952	protein_coding	principal1	4	1	134243777	943
ENSMUSG00000086322	protein_coding	E130218I03Rik	ENSMUST00000131447	protein_coding	principal1	4	1	134243778	888
ENSMUSG00000053111	protein_coding	Fank1	ENSMUST00000151031	protein_coding		7	1	133776891	824
ENSMUSG00000022364	protein_coding	Tbc1d31	ENSMUST00000022992	protein_coding	principal1	15	1	57912199	3311
ENSMUSG00000086322	protein_coding	E130218I03Rik	ENSMUST00000134320	processed_transcript		4	1	134243983	802
ENSMUSG00000053111	protein_coding	Fank1	ENSMUST00000121560	protein_coding		7	1	133776942	475
ENSMUSG00000075706	protein_coding	Gpx4	ENSMUST00000105372	protein_coding	principal1	10	1	80053488	959
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000035889	protein_coding	principal2	9	1	80165031	7871
ENSMUSG00000053111	protein_coding	Fank1	ENSMUST00000211077	protein_coding		7	1	133789485	515
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000183377	retained_intron		9	1	80165038	2991
ENSMUSG00000075706	protein_coding	Gpx4	ENSMUST00000145703	processed_transcript		10	1	80054035	516
ENSMUSG00000109635	antisense	Gm45670	ENSMUST00000211382	antisense		7	1	133747624	711
ENSMUSG00000075706	protein_coding	Gpx4	ENSMUST00000097227	protein_coding		10	1	80054037	995
ENSMUSG00000024082	protein_coding	Ndufaf7	ENSMUST00000024887	protein_coding	principal2	17	1	78937136	1749
ENSMUSG00000075706	protein_coding	Gpx4	ENSMUST00000183037	protein_coding		10	1	80054465	735
ENSMUSG00000029235	protein_coding	Pdcl2	ENSMUST00000122213	protein_coding	alternative2	5	-1	76331133	1049
ENSMUSG00000024082	protein_coding	Ndufaf7	ENSMUST00000233068	protein_coding	alternative2	17	1	78937137	2706
ENSMUSG00000075706	protein_coding	Gpx4	ENSMUST00000154095	retained_intron		10	1	80055894	380
ENSMUSG00000075706	protein_coding	Gpx4	ENSMUST00000136081	retained_intron		10	1	80055998	280
ENSMUSG00000024082	protein_coding	Ndufaf7	ENSMUST00000233777	protein_coding		17	1	78937148	881
ENSMUSG00000024082	protein_coding	Ndufaf7	ENSMUST00000233138	retained_intron		17	1	78937159	514
ENSMUSG00000107744	lincRNA	1700072O05Rik	ENSMUST00000204672	lincRNA		6	1	120554796	321
ENSMUSG00000028840	protein_coding	Zfp593	ENSMUST00000030644	protein_coding	principal1	4	-1	134245592	1994
ENSMUSG00000024082	protein_coding	Ndufaf7	ENSMUST00000233787	retained_intron		17	1	78937316	729
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000113268	protein_coding		9	1	80165040	7927
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000002699	protein_coding	principal1	17	-1	32321185	3731
ENSMUSG00000107901	processed_pseudogene	Gm44074	ENSMUST00000204562	processed_pseudogene		6	-1	120577707	337
ENSMUSG00000024082	protein_coding	Ndufaf7	ENSMUST00000233168	retained_intron		17	1	78944895	777
ENSMUSG00000028840	protein_coding	Zfp593	ENSMUST00000129183	processed_transcript		4	-1	134245542	2020
ENSMUSG00000024082	protein_coding	Ndufaf7	ENSMUST00000233935	protein_coding		17	1	78945027	392
ENSMUSG00000107580	TEC	Gm44124	ENSMUST00000204159	TEC		6	-1	120580176	472
ENSMUSG00000024082	protein_coding	Ndufaf7	ENSMUST00000232821	retained_intron		17	1	78946028	741
ENSMUSG00000029235	protein_coding	Pdcl2	ENSMUST00000031145	protein_coding	principal3	5	-1	76331156	1181
ENSMUSG00000009640	protein_coding	Dmap1	ENSMUST00000102687	protein_coding	principal1	4	-1	117682273	1566
ENSMUSG00000106207	processed_pseudogene	Gm19184	ENSMUST00000196798	processed_pseudogene		3	1	140169284	928
ENSMUSG00000009640	protein_coding	Dmap1	ENSMUST00000129510	processed_transcript		4	-1	117681983	1862
ENSMUSG00000009640	protein_coding	Dmap1	ENSMUST00000123586	processed_transcript		4	-1	117682221	604
ENSMUSG00000104596	processed_pseudogene	Gm19080	ENSMUST00000196082	processed_pseudogene		3	-1	140507267	550
ENSMUSG00000009640	protein_coding	Dmap1	ENSMUST00000134642	processed_transcript		4	-1	117682211	443
ENSMUSG00000009640	protein_coding	Dmap1	ENSMUST00000127750	processed_transcript		4	-1	117682271	454
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000184480	protein_coding	alternative1	9	1	80165227	4139
ENSMUSG00000038797	protein_coding	Zscan2	ENSMUST00000132163	protein_coding		7	1	80860920	699
ENSMUSG00000108659	processed_transcript	Gm34121	ENSMUST00000206188	lincRNA		7	-1	56049974	1490
ENSMUSG00000038797	protein_coding	Zscan2	ENSMUST00000205361	protein_coding		7	1	80860951	692
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000127779	protein_coding		9	1	80217611	4067
ENSMUSG00000108659	processed_transcript	Gm34121	ENSMUST00000206544	retained_intron		7	-1	56049939	3561
ENSMUSG00000038797	protein_coding	Zscan2	ENSMUST00000147125	protein_coding		7	1	80860953	1582
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000113266	protein_coding	alternative1	9	1	80217629	7632
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000076140	protein_coding		9	1	80217637	7663
ENSMUSG00000038797	protein_coding	Zscan2	ENSMUST00000044115	protein_coding	principal1	7	1	80862108	2310
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000130496	retained_intron		9	1	80262047	938
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000093106	protein_coding	alternative1	11	1	54303798	5804
ENSMUSG00000038797	protein_coding	Zscan2	ENSMUST00000155128	protein_coding		7	1	80862896	939
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000156199	retained_intron		9	1	80285414	635
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000139981	retained_intron		9	1	80286281	695
ENSMUSG00000003131	protein_coding	Pafah1b2	ENSMUST00000172450	protein_coding	principal1	9	-1	45985051	6873
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000143804	processed_transcript		9	1	80305771	471
ENSMUSG00000003131	protein_coding	Pafah1b2	ENSMUST00000214179	protein_coding	principal1	9	-1	45985394	794
ENSMUSG00000033577	protein_coding	Myo6	ENSMUST00000138650	retained_intron		9	1	80306914	1196
ENSMUSG00000003131	protein_coding	Pafah1b2	ENSMUST00000215060	protein_coding		9	-1	45984824	714
ENSMUSG00000003131	protein_coding	Pafah1b2	ENSMUST00000213853	protein_coding		9	-1	45984827	453
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000168189	protein_coding	alternative1	7	-1	126200501	4552
ENSMUSG00000003131	protein_coding	Pafah1b2	ENSMUST00000215427	protein_coding		9	-1	45984337	456
ENSMUSG00000003131	protein_coding	Pafah1b2	ENSMUST00000217514	protein_coding		9	-1	46012690	440
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000000145	protein_coding		11	1	54304005	2297
ENSMUSG00000025269	protein_coding	Apex2	ENSMUST00000112720	protein_coding	principal2	X	-1	150589844	4742
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000009344	protein_coding	principal3	7	-1	126200408	4455
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000138515	protein_coding		11	1	54304022	691
ENSMUSG00000003131	protein_coding	Pafah1b2	ENSMUST00000217636	protein_coding		9	-1	45984783	368
ENSMUSG00000025269	protein_coding	Apex2	ENSMUST00000112725	protein_coding		X	-1	150589844	3613
ENSMUSG00000029236	protein_coding	Nmu	ENSMUST00000031146	protein_coding	principal1	5	-1	76363788	828
ENSMUSG00000003131	protein_coding	Pafah1b2	ENSMUST00000216334	protein_coding		9	-1	45984827	386
ENSMUSG00000025269	protein_coding	Apex2	ENSMUST00000112727	protein_coding		X	-1	150588082	1663
ENSMUSG00000003131	protein_coding	Pafah1b2	ENSMUST00000214996	retained_intron		9	-1	45984835	1258
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000166719	nonsense_mediated_decay		7	-1	126104808	980
ENSMUSG00000087037	processed_transcript	4930432L08Rik	ENSMUST00000132154	processed_transcript		5	1	76331238	1608
ENSMUSG00000032047	protein_coding	Acat1	ENSMUST00000034547	protein_coding	principal1	9	-1	53610382	3405
ENSMUSG00000025269	protein_coding	Apex2	ENSMUST00000112721	protein_coding	alternative2	X	-1	150588096	1852
ENSMUSG00000111267	processed_pseudogene	Gm18292	ENSMUST00000216673	processed_pseudogene		9	1	80451248	919
ENSMUSG00000025269	protein_coding	Apex2	ENSMUST00000112719	protein_coding		X	-1	150588081	969
ENSMUSG00000032047	protein_coding	Acat1	ENSMUST00000169317	processed_transcript		9	-1	53583757	500
ENSMUSG00000032047	protein_coding	Acat1	ENSMUST00000167130	retained_intron		9	-1	53610330	356
ENSMUSG00000106159	processed_pseudogene	Gm31211	ENSMUST00000199170	processed_pseudogene		3	-1	140627432	253
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000167315	retained_intron		7	-1	126110051	2806
ENSMUSG00000025269	protein_coding	Apex2	ENSMUST00000152332	retained_intron		X	-1	150588085	2617
ENSMUSG00000025269	protein_coding	Apex2	ENSMUST00000124521	processed_transcript		X	-1	150589868	363
ENSMUSG00000105777	lincRNA	Gm43049	ENSMUST00000198942	lincRNA		3	-1	140760704	559
ENSMUSG00000025269	protein_coding	Apex2	ENSMUST00000138958	processed_transcript		X	-1	150586207	784
ENSMUSG00000105777	lincRNA	Gm43049	ENSMUST00000198099	lincRNA		3	-1	140760690	462
ENSMUSG00000025269	protein_coding	Apex2	ENSMUST00000140207	protein_coding		X	-1	150588071	795
ENSMUSG00000025269	protein_coding	Apex2	ENSMUST00000026303	protein_coding	principal2	X	-1	150588149	1884
ENSMUSG00000028670	protein_coding	Lypla2	ENSMUST00000105852	protein_coding	principal1	4	-1	135971929	1588
ENSMUSG00000095465	processed_pseudogene	Gm6214	ENSMUST00000178845	processed_pseudogene		3	-1	140839637	541
ENSMUSG00000104790	processed_pseudogene	Gm43276	ENSMUST00000199712	processed_pseudogene		3	-1	140871536	364
ENSMUSG00000028670	protein_coding	Lypla2	ENSMUST00000067567	protein_coding	principal1	4	-1	135972626	1626
ENSMUSG00000104544	lincRNA	Gm32754	ENSMUST00000199504	lincRNA		3	-1	140908467	480
ENSMUSG00000118659	lincRNA	AC158307.1	ENSMUST00000199442	lincRNA		3	-1	140917459	257
ENSMUSG00000014782	protein_coding	Plekhg4	ENSMUST00000160650	protein_coding		8	1	105373274	343
ENSMUSG00000106540	lincRNA	4930590L14Rik	ENSMUST00000196030	lincRNA		3	1	140951876	836
ENSMUSG00000028670	protein_coding	Lypla2	ENSMUST00000156948	retained_intron		4	-1	135970470	929
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000170675	processed_transcript		7	-1	126160871	5028
ENSMUSG00000109970	processed_pseudogene	Gm17995	ENSMUST00000209266	processed_pseudogene		8	-1	88721608	530
ENSMUSG00000047674	protein_coding	Pdha2	ENSMUST00000057860	protein_coding	principal1	3	-1	141212355	2352
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000171861	nonsense_mediated_decay		7	-1	126107166	938
ENSMUSG00000110299	processed_pseudogene	Gm17910	ENSMUST00000211038	processed_pseudogene		8	-1	88729040	838
ENSMUSG00000028670	protein_coding	Lypla2	ENSMUST00000145350	retained_intron		4	-1	135972588	1119
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000168933	retained_intron		7	-1	126105021	640
ENSMUSG00000028670	protein_coding	Lypla2	ENSMUST00000150978	retained_intron		4	-1	135972603	402
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000168564	nonsense_mediated_decay		7	-1	126107129	546
ENSMUSG00000029071	protein_coding	Dvl1	ENSMUST00000030948	protein_coding	principal1	4	1	155847402	3358
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000165608	nonsense_mediated_decay		7	-1	126112893	984
ENSMUSG00000032131	protein_coding	Abcg4	ENSMUST00000034648	protein_coding	principal1	9	-1	44287544	3476
ENSMUSG00000114365	processed_pseudogene	Gm9098	ENSMUST00000223971	processed_pseudogene		13	-1	118569782	533
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000165660	protein_coding		7	-1	126112825	403
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000235205	retained_intron		17	-1	32321238	4183
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000166538	nonsense_mediated_decay		7	-1	126140662	686
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000237103	retained_intron		17	-1	32321125	4071
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000237381	nonsense_mediated_decay		17	-1	32321137	4570
ENSMUSG00000100727	lincRNA	1700003P14Rik	ENSMUST00000185602	lincRNA		13	1	118555360	1078
ENSMUSG00000014782	protein_coding	Plekhg4	ENSMUST00000214056	protein_coding	alternative2	8	1	105373819	3654
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000236267	nonsense_mediated_decay		17	-1	32315730	1881
ENSMUSG00000025246	protein_coding	Tbl1x	ENSMUST00000088217	protein_coding	principal1	X	1	77511013	5234
ENSMUSG00000022364	protein_coding	Tbc1d31	ENSMUST00000110175	processed_transcript		15	1	57912234	3468
ENSMUSG00000014782	protein_coding	Plekhg4	ENSMUST00000159286	nonsense_mediated_decay		8	1	105374904	4835
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000235764	nonsense_mediated_decay		17	-1	32321159	3260
ENSMUSG00000022364	protein_coding	Tbc1d31	ENSMUST00000159775	nonsense_mediated_decay		15	1	57912239	434
ENSMUSG00000014782	protein_coding	Plekhg4	ENSMUST00000160191	protein_coding	alternative2	8	1	105375381	3339
ENSMUSG00000100727	lincRNA	1700003P14Rik	ENSMUST00000191022	lincRNA		13	1	118556152	855
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000236954	nonsense_mediated_decay		17	-1	32321113	2021
ENSMUSG00000022364	protein_coding	Tbc1d31	ENSMUST00000159801	retained_intron		15	1	57913005	3583
ENSMUSG00000100727	lincRNA	1700003P14Rik	ENSMUST00000185959	lincRNA		13	1	118556168	994
ENSMUSG00000025246	protein_coding	Tbl1x	ENSMUST00000133893	retained_intron		X	1	77511214	3611
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000236303	retained_intron		17	-1	32316390	672
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000108904	protein_coding	principal5	11	1	54304202	2594
ENSMUSG00000014782	protein_coding	Plekhg4	ENSMUST00000014927	protein_coding	principal2	8	1	105375381	4167
ENSMUSG00000022364	protein_coding	Tbc1d31	ENSMUST00000160098	retained_intron		15	1	57913855	2457
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000167268	retained_intron		7	-1	126200422	4263
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000238151	retained_intron		17	-1	32316121	799
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000166540	nonsense_mediated_decay		7	-1	126153035	609
ENSMUSG00000022364	protein_coding	Tbc1d31	ENSMUST00000162157	retained_intron		15	1	57916013	3727
ENSMUSG00000032131	protein_coding	Abcg4	ENSMUST00000161354	protein_coding	principal1	9	-1	44288615	3999
ENSMUSG00000014782	protein_coding	Plekhg4	ENSMUST00000161672	retained_intron		8	1	105380494	1613
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000237733	retained_intron		17	-1	32321145	4358
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000164741	protein_coding		7	-1	126161012	765
ENSMUSG00000048469	protein_coding	Olfr564	ENSMUST00000061096	protein_coding	principal1	7	1	102803480	951
ENSMUSG00000025271	protein_coding	Pfkfb1	ENSMUST00000153221	protein_coding		X	1	150588229	914
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000236785	processed_transcript		17	-1	32318804	517
ENSMUSG00000022364	protein_coding	Tbc1d31	ENSMUST00000161329	protein_coding		15	1	57958413	914
ENSMUSG00000020888	protein_coding	Dvl2	ENSMUST00000019362	protein_coding	principal1	11	1	70000595	2968
ENSMUSG00000026869	protein_coding	Psmd5	ENSMUST00000028225	protein_coding	principal1	2	-1	34870962	4397
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000236761	processed_transcript		17	-1	32321097	334
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000168649	processed_transcript		7	-1	126161020	791
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000169059	processed_transcript		7	-1	126200342	2085
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000108905	protein_coding	alternative1	11	1	54304202	5807
ENSMUSG00000025271	protein_coding	Pfkfb1	ENSMUST00000124381	processed_transcript		X	1	150588256	715
ENSMUSG00000087330	lincRNA	Bloodlinc	ENSMUST00000126237	lincRNA		11	-1	102377020	679
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000167147	nonsense_mediated_decay		7	-1	126199928	332
ENSMUSG00000020888	protein_coding	Dvl2	ENSMUST00000102575	nonsense_mediated_decay		11	1	70000617	5037
ENSMUSG00000026869	protein_coding	Psmd5	ENSMUST00000143456	retained_intron		2	-1	34870933	3406
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000166368	processed_transcript		7	-1	126181637	370
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000149403	protein_coding		11	1	54313677	508
ENSMUSG00000026869	protein_coding	Psmd5	ENSMUST00000135575	protein_coding		2	-1	34857691	555
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000072178	protein_coding	alternative1	11	1	54314896	2432
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000163959	protein_coding		7	-1	126200413	687
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000237860	protein_coding		17	-1	32320725	741
ENSMUSG00000026869	protein_coding	Psmd5	ENSMUST00000189715	processed_transcript		2	-1	34874968	423
ENSMUSG00000029071	protein_coding	Dvl1	ENSMUST00000156997	retained_intron		4	1	155847466	4774
ENSMUSG00000026869	protein_coding	Psmd5	ENSMUST00000202917	processed_transcript		2	-1	34872210	1103
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000236580	protein_coding		17	-1	32320683	402
ENSMUSG00000000131	protein_coding	Xpo6	ENSMUST00000206784	retained_intron		7	-1	126187108	7335
ENSMUSG00000032131	protein_coding	Abcg4	ENSMUST00000085979	retained_intron		9	-1	44279838	1017
ENSMUSG00000020888	protein_coding	Dvl2	ENSMUST00000130820	retained_intron		11	1	70000821	1417
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000235360	protein_coding		17	-1	32321104	467
ENSMUSG00000032131	protein_coding	Abcg4	ENSMUST00000162783	nonsense_mediated_decay		9	-1	44279600	749
ENSMUSG00000090559	transcribed_processed_pseudogene	Gm17137	ENSMUST00000164106	processed_transcript		7	1	126164033	4371
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000101211	protein_coding	alternative1	11	1	54314936	3106
ENSMUSG00000020888	protein_coding	Dvl2	ENSMUST00000135422	retained_intron		11	1	70000835	1010
ENSMUSG00000024045	protein_coding	Akap8	ENSMUST00000235702	protein_coding		17	-1	32320658	437
ENSMUSG00000090559	transcribed_processed_pseudogene	Gm17137	ENSMUST00000165729	transcribed_processed_pseudogene		7	1	126165645	957
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000101213	protein_coding	alternative1	11	1	54314936	2730
ENSMUSG00000020888	protein_coding	Dvl2	ENSMUST00000149477	retained_intron		11	1	70005458	739
ENSMUSG00000032131	protein_coding	Abcg4	ENSMUST00000160323	processed_transcript		9	-1	44287536	1547
ENSMUSG00000032131	protein_coding	Abcg4	ENSMUST00000159997	retained_intron		9	-1	44279791	696
ENSMUSG00000020888	protein_coding	Dvl2	ENSMUST00000152732	retained_intron		11	1	70006980	720
ENSMUSG00000029071	protein_coding	Dvl1	ENSMUST00000133184	retained_intron		4	1	155847566	2797
ENSMUSG00000032131	protein_coding	Abcg4	ENSMUST00000161206	retained_intron		9	-1	44281658	731
ENSMUSG00000020888	protein_coding	Dvl2	ENSMUST00000190940	protein_coding	principal1	11	1	70000617	5037
ENSMUSG00000105654	processed_pseudogene	Gm29704	ENSMUST00000196011	processed_pseudogene		3	1	89116724	253
ENSMUSG00000032131	protein_coding	Abcg4	ENSMUST00000161408	protein_coding		9	-1	44288357	678
ENSMUSG00000086687	processed_transcript	4930547E08Rik	ENSMUST00000143559	processed_transcript		2	-1	103810622	541
ENSMUSG00000105104	antisense	Gm43729	ENSMUST00000196949	antisense		3	-1	127557561	499
ENSMUSG00000029071	protein_coding	Dvl1	ENSMUST00000141539	retained_intron		4	1	155847586	3286
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000064690	protein_coding		11	1	54314988	1988
ENSMUSG00000032131	protein_coding	Abcg4	ENSMUST00000160384	protein_coding		9	-1	44288138	402
ENSMUSG00000099054	lincRNA	Gm27242	ENSMUST00000184211	lincRNA		15	1	66286917	1151
ENSMUSG00000029071	protein_coding	Dvl1	ENSMUST00000143457	retained_intron		4	1	155847671	3284
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000108899	protein_coding		11	1	54314988	1662
ENSMUSG00000081348	processed_pseudogene	Gm13878	ENSMUST00000117986	processed_pseudogene		2	-1	103811617	577
ENSMUSG00000029071	protein_coding	Dvl1	ENSMUST00000140529	processed_transcript		4	1	155853410	393
ENSMUSG00000115784	lincRNA	Gm30929	ENSMUST00000228702	lincRNA		15	-1	66340714	2210
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000094194	protein_coding	alternative1	11	1	54319856	2554
ENSMUSG00000029071	protein_coding	Dvl1	ENSMUST00000129450	retained_intron		4	1	155854572	707
ENSMUSG00000081010	processed_pseudogene	Gm13880	ENSMUST00000118421	processed_pseudogene		2	-1	103819476	474
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000156252	protein_coding		11	1	54320152	1121
ENSMUSG00000059058	processed_pseudogene	Tma7-ps	ENSMUST00000118448	processed_pseudogene		1	1	171711088	195
ENSMUSG00000029071	protein_coding	Dvl1	ENSMUST00000168552	protein_coding	principal1	4	1	155847461	2776
ENSMUSG00000115351	processed_pseudogene	Gm19077	ENSMUST00000227329	processed_pseudogene		15	-1	66358484	365
ENSMUSG00000083495	processed_pseudogene	Gm13877	ENSMUST00000120614	processed_pseudogene		2	-1	103837517	417
ENSMUSG00000104224	processed_pseudogene	Gm37693	ENSMUST00000194562	processed_pseudogene		1	-1	171725638	234
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000127731	processed_transcript		11	1	54335497	4358
ENSMUSG00000020333	protein_coding	Acsl6	ENSMUST00000139484	protein_coding		11	1	54345888	616
ENSMUSG00000104440	processed_pseudogene	Gm19030	ENSMUST00000194947	processed_pseudogene		1	1	171729915	552
ENSMUSG00000025271	protein_coding	Pfkfb1	ENSMUST00000080884	protein_coding	principal2	X	1	150589921	1739
ENSMUSG00000026870	protein_coding	Cutal	ENSMUST00000113068	protein_coding	principal1	2	1	34874396	2278
ENSMUSG00000081275	processed_pseudogene	Gm13875	ENSMUST00000120162	processed_pseudogene		2	1	103838954	282
ENSMUSG00000025271	protein_coding	Pfkfb1	ENSMUST00000112713	protein_coding	alternative1	X	1	150594478	1872
ENSMUSG00000026870	protein_coding	Cutal	ENSMUST00000149250	retained_intron		2	1	34874459	369
ENSMUSG00000089924	antisense	Gm15689	ENSMUST00000160604	antisense		3	-1	141682900	1159
ENSMUSG00000085888	antisense	Gm12224	ENSMUST00000124047	antisense		11	-1	54353479	567
ENSMUSG00000039018	protein_coding	Mtg1	ENSMUST00000036977	protein_coding	principal1	7	1	140137564	1595
ENSMUSG00000026870	protein_coding	Cutal	ENSMUST00000184164	nonsense_mediated_decay		2	1	34874476	1054
ENSMUSG00000089737	antisense	Gm15688	ENSMUST00000161394	antisense		3	-1	141465333	2418
ENSMUSG00000085888	antisense	Gm12224	ENSMUST00000127107	antisense		11	-1	54353430	726
ENSMUSG00000029072	protein_coding	Tas1r3	ENSMUST00000030949	protein_coding	principal1	4	-1	155863362	3523
ENSMUSG00000026870	protein_coding	Cutal	ENSMUST00000028228	protein_coding		2	1	34874518	2179
ENSMUSG00000039018	protein_coding	Mtg1	ENSMUST00000150667	retained_intron		7	1	140137649	2133
ENSMUSG00000071531	protein_coding	Gprin2	ENSMUST00000226613	protein_coding	principal1	14	-1	34201633	10354
ENSMUSG00000025271	protein_coding	Pfkfb1	ENSMUST00000150783	retained_intron		X	1	150594610	2681
ENSMUSG00000026870	protein_coding	Cutal	ENSMUST00000047447	protein_coding	principal1	2	1	34874476	1054
ENSMUSG00000025271	protein_coding	Pfkfb1	ENSMUST00000142848	processed_transcript		X	1	150613934	757
ENSMUSG00000071531	protein_coding	Gprin2	ENSMUST00000226511	protein_coding		14	-1	34201653	438
ENSMUSG00000025271	protein_coding	Pfkfb1	ENSMUST00000154528	processed_transcript		X	1	150625341	589
ENSMUSG00000071531	protein_coding	Gprin2	ENSMUST00000096019	protein_coding		14	-1	34201633	430
ENSMUSG00000115482	protein_coding	Vmn1r36	ENSMUST00000226829	protein_coding	principal2	6	-1	66719168	1923
ENSMUSG00000032343	protein_coding	Impg1	ENSMUST00000113250	protein_coding	principal2	9	-1	80465481	2965
ENSMUSG00000039018	protein_coding	Mtg1	ENSMUST00000141070	retained_intron		7	1	140137663	890
ENSMUSG00000115482	protein_coding	Vmn1r36	ENSMUST00000226142	protein_coding	alternative2	6	-1	66719168	1770
ENSMUSG00000039018	protein_coding	Mtg1	ENSMUST00000211171	nonsense_mediated_decay		7	1	140137685	326
ENSMUSG00000115299	processed_pseudogene	Gm49168	ENSMUST00000227397	processed_pseudogene		14	1	34218076	310
ENSMUSG00000032343	protein_coding	Impg1	ENSMUST00000185068	protein_coding		9	-1	80465438	796
ENSMUSG00000115482	protein_coding	Vmn1r36	ENSMUST00000226728	protein_coding		6	-1	66719168	1458
ENSMUSG00000039018	protein_coding	Mtg1	ENSMUST00000124253	protein_coding		7	1	140137963	224
ENSMUSG00000072809	antisense	9330160F10Rik	ENSMUST00000101007	antisense		11	-1	69060483	2766
ENSMUSG00000115482	protein_coding	Vmn1r36	ENSMUST00000226635	protein_coding	principal2	6	-1	66716889	918
ENSMUSG00000039018	protein_coding	Mtg1	ENSMUST00000140579	retained_intron		7	1	140140221	722
ENSMUSG00000032343	protein_coding	Impg1	ENSMUST00000085289	protein_coding	alternative2	9	-1	80465438	3356
ENSMUSG00000039018	protein_coding	Mtg1	ENSMUST00000155723	processed_transcript		7	1	140148959	495
ENSMUSG00000045176	protein_coding	Borcs6	ENSMUST00000051888	protein_coding	principal1	11	1	69059717	1862
ENSMUSG00000111510	lincRNA	Gm48387	ENSMUST00000214415	lincRNA		9	-1	80601097	214
ENSMUSG00000111717	lincRNA	Gm39380	ENSMUST00000214710	lincRNA		9	1	80709995	192
ENSMUSG00000045733	protein_coding	Sprn	ENSMUST00000059241	protein_coding	principal1	7	-1	140154877	3374
ENSMUSG00000067996	protein_coding	Bpifb9b	ENSMUST00000088921	protein_coding	principal1	2	1	154307227	2067
ENSMUSG00000051648	protein_coding	Kctd19	ENSMUST00000167294	protein_coding	principal1	8	-1	105413502	2979
ENSMUSG00000094116	protein_coding	Gm11237	ENSMUST00000178319	protein_coding	principal1	4	1	73622984	1322
ENSMUSG00000098685	lincRNA	Gm27224	ENSMUST00000184749	lincRNA		9	1	80802651	564
ENSMUSG00000045733	protein_coding	Sprn	ENSMUST00000156791	protein_coding		7	-1	140153541	532
ENSMUSG00000051648	protein_coding	Kctd19	ENSMUST00000063071	protein_coding		8	-1	105413502	3048
ENSMUSG00000095935	protein_coding	Gm11238	ENSMUST00000084479	protein_coding	principal1	4	1	73607881	1323
ENSMUSG00000098935	processed_pseudogene	Gm27225	ENSMUST00000183833	processed_pseudogene		9	-1	80927213	557
ENSMUSG00000051648	protein_coding	Kctd19	ENSMUST00000168196	protein_coding		8	-1	105385417	450
ENSMUSG00000096700	protein_coding	Gm11236	ENSMUST00000180092	protein_coding	principal1	4	1	73638121	1322
ENSMUSG00000037606	protein_coding	Osbpl5	ENSMUST00000137627	retained_intron		7	-1	143694561	1917
ENSMUSG00000051648	protein_coding	Kctd19	ENSMUST00000168888	nonsense_mediated_decay		8	-1	105413456	624
ENSMUSG00000097655	lincRNA	Gm26713	ENSMUST00000181827	lincRNA		9	1	80955436	627
ENSMUSG00000099085	processed_pseudogene	Gm8151	ENSMUST00000184817	processed_pseudogene		9	-1	81016958	871
ENSMUSG00000087247	protein_coding	Alkal1	ENSMUST00000133144	protein_coding	principal1	1	1	6359218	971
ENSMUSG00000028004	protein_coding	Npy2r	ENSMUST00000029633	protein_coding	principal1	3	-1	82548084	3364
ENSMUSG00000102706	processed_pseudogene	Gm7417	ENSMUST00000192950	processed_pseudogene		1	-1	6383106	473
ENSMUSG00000028004	protein_coding	Npy2r	ENSMUST00000098997	protein_coding	principal1	3	-1	82548052	3325
ENSMUSG00000098429	lincRNA	Gm27226	ENSMUST00000184676	lincRNA		9	1	81455397	511
ENSMUSG00000103355	processed_pseudogene	Gm2147	ENSMUST00000193588	processed_pseudogene		1	1	6380394	639
ENSMUSG00000085521	transcribed_processed_pseudogene	4930526A20Rik	ENSMUST00000142461	processed_transcript		17	-1	28076677	1628
ENSMUSG00000085521	transcribed_processed_pseudogene	4930526A20Rik	ENSMUST00000134228	transcribed_processed_pseudogene		17	-1	28076355	950
ENSMUSG00000051278	protein_coding	Zgrf1	ENSMUST00000200490	nonsense_mediated_decay		3	1	127553489	7153
ENSMUSG00000103845	processed_pseudogene	Gm19026	ENSMUST00000194240	processed_pseudogene		1	-1	6441296	4530
ENSMUSG00000028004	protein_coding	Npy2r	ENSMUST00000182181	protein_coding		3	-1	82547960	1331
ENSMUSG00000051278	protein_coding	Zgrf1	ENSMUST00000199888	nonsense_mediated_decay		3	1	127553502	7198
ENSMUSG00000036915	protein_coding	Kirrel2	ENSMUST00000140565	retained_intron		7	-1	30457652	3901
ENSMUSG00000028004	protein_coding	Npy2r	ENSMUST00000182831	protein_coding	principal1	3	-1	82547960	1689
ENSMUSG00000102514	processed_pseudogene	Gm35323	ENSMUST00000191836	processed_pseudogene		3	1	82577577	499
ENSMUSG00000102629	processed_transcript	Gm29999	ENSMUST00000192423	retained_intron		3	-1	82663255	2881
ENSMUSG00000102629	processed_transcript	Gm29999	ENSMUST00000193554	lincRNA		3	-1	82664900	671
ENSMUSG00000097466	antisense	D430036J16Rik	ENSMUST00000181893	antisense		9	1	81631551	1458
ENSMUSG00000097466	antisense	D430036J16Rik	ENSMUST00000181447	antisense		9	1	81631930	1732
ENSMUSG00000097466	antisense	D430036J16Rik	ENSMUST00000183536	antisense		9	1	81632033	645
ENSMUSG00000097466	antisense	D430036J16Rik	ENSMUST00000180663	antisense		9	1	81632358	1411
ENSMUSG00000051278	protein_coding	Zgrf1	ENSMUST00000196141	protein_coding	principal1	3	1	127553502	6932
ENSMUSG00000097466	antisense	D430036J16Rik	ENSMUST00000183781	antisense		9	1	81632418	641
ENSMUSG00000051278	protein_coding	Zgrf1	ENSMUST00000195955	protein_coding		3	1	127553633	3804
ENSMUSG00000006494	protein_coding	Pdk1	ENSMUST00000006669	protein_coding	principal1	2	1	71873224	5185
ENSMUSG00000051278	protein_coding	Zgrf1	ENSMUST00000196341	nonsense_mediated_decay		3	1	127583760	2994
ENSMUSG00000049511	protein_coding	Htr1b	ENSMUST00000183482	protein_coding	principal1	9	-1	81633828	4724
ENSMUSG00000036825	protein_coding	Ssx2ip	ENSMUST00000106151	protein_coding	alternative1	3	1	146404642	3232
ENSMUSG00000051278	protein_coding	Zgrf1	ENSMUST00000197108	retained_intron		3	1	127594230	1945
ENSMUSG00000015316	protein_coding	Slamf1	ENSMUST00000015460	protein_coding	principal1	1	1	171767127	2693
ENSMUSG00000051278	protein_coding	Zgrf1	ENSMUST00000043108	protein_coding	principal1	3	1	127553489	7046
ENSMUSG00000049511	protein_coding	Htr1b	ENSMUST00000051005	protein_coding	principal1	9	-1	81632615	1273
ENSMUSG00000059921	protein_coding	Unc5c	ENSMUST00000106236	protein_coding	principal3	3	1	141465216	9646
ENSMUSG00000037606	protein_coding	Osbpl5	ENSMUST00000119499	protein_coding	alternative2	7	-1	143740341	3775
ENSMUSG00000015316	protein_coding	Slamf1	ENSMUST00000163992	retained_intron		1	1	171767155	4420
ENSMUSG00000025270	protein_coding	Alas2	ENSMUST00000066337	protein_coding	principal3	X	1	150547375	2037
ENSMUSG00000079225	transcribed_processed_pseudogene	Gm9531	ENSMUST00000055820	processed_transcript		9	1	81677598	638
ENSMUSG00000059921	protein_coding	Unc5c	ENSMUST00000075282	protein_coding	alternative1	3	1	141465574	3890
ENSMUSG00000037606	protein_coding	Osbpl5	ENSMUST00000020411	protein_coding	principal3	7	-1	143741963	3994
ENSMUSG00000036825	protein_coding	Ssx2ip	ENSMUST00000106153	protein_coding	principal3	3	1	146404642	3446
ENSMUSG00000079225	transcribed_processed_pseudogene	Gm9531	ENSMUST00000183511	transcribed_processed_pseudogene		9	1	81677612	775
ENSMUSG00000059921	protein_coding	Unc5c	ENSMUST00000200114	retained_intron		3	1	141465599	5330
ENSMUSG00000036825	protein_coding	Ssx2ip	ENSMUST00000039021	protein_coding	alternative1	3	1	146404664	3410
ENSMUSG00000037606	protein_coding	Osbpl5	ENSMUST00000140502	retained_intron		7	-1	143695087	399
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000087122	protein_coding	principal1	1	1	75375297	10801
ENSMUSG00000059921	protein_coding	Unc5c	ENSMUST00000151007	processed_transcript		3	1	141465599	357
ENSMUSG00000037606	protein_coding	Osbpl5	ENSMUST00000149736	retained_intron		7	-1	143705119	626
ENSMUSG00000059921	protein_coding	Unc5c	ENSMUST00000155416	retained_intron		3	1	141465599	4577
ENSMUSG00000059921	protein_coding	Unc5c	ENSMUST00000130636	protein_coding		3	1	141465599	3595
ENSMUSG00000037606	protein_coding	Osbpl5	ENSMUST00000134056	protein_coding		7	-1	143756985	634
ENSMUSG00000025270	protein_coding	Alas2	ENSMUST00000112715	protein_coding	alternative2	X	1	150547459	1892
ENSMUSG00000059921	protein_coding	Unc5c	ENSMUST00000142762	nonsense_mediated_decay		3	1	141465671	3498
ENSMUSG00000037606	protein_coding	Osbpl5	ENSMUST00000153864	processed_transcript		7	-1	143740299	700
ENSMUSG00000025270	protein_coding	Alas2	ENSMUST00000134670	retained_intron		X	1	150554037	485
ENSMUSG00000059921	protein_coding	Unc5c	ENSMUST00000123631	retained_intron		3	1	141789852	417
ENSMUSG00000025270	protein_coding	Alas2	ENSMUST00000142474	processed_transcript		X	1	150566390	569
ENSMUSG00000036825	protein_coding	Ssx2ip	ENSMUST00000106149	protein_coding	alternative1	3	1	146404686	2416
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000148515	protein_coding		1	1	75382114	932
ENSMUSG00000106071	TEC	Gm43826	ENSMUST00000199604	TEC		3	1	141686553	2612
ENSMUSG00000036825	protein_coding	Ssx2ip	ENSMUST00000149262	protein_coding		3	1	146404691	473
ENSMUSG00000018574	protein_coding	Acadvl	ENSMUST00000102574	protein_coding	principal2	11	-1	70015408	2168
ENSMUSG00000036825	protein_coding	Ssx2ip	ENSMUST00000129978	protein_coding		3	1	146404978	644
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000113590	protein_coding		1	1	75382114	3393
ENSMUSG00000036825	protein_coding	Ssx2ip	ENSMUST00000141103	retained_intron		3	1	146430529	650
ENSMUSG00000018574	protein_coding	Acadvl	ENSMUST00000134516	retained_intron		11	-1	70010911	538
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000187214	retained_intron		1	1	75382126	295
ENSMUSG00000110748	processed_pseudogene	Gm19228	ENSMUST00000214030	processed_pseudogene		9	-1	82197195	717
ENSMUSG00000018574	protein_coding	Acadvl	ENSMUST00000018718	protein_coding	alternative2	11	-1	70015387	2020
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000125306	nonsense_mediated_decay		1	1	75382138	463
ENSMUSG00000081273	processed_pseudogene	Gm15896	ENSMUST00000118045	processed_pseudogene		9	1	82202648	440
ENSMUSG00000085731	antisense	Gm16229	ENSMUST00000133270	antisense		10	1	127663839	1232
ENSMUSG00000041479	protein_coding	Syt15	ENSMUST00000147298	retained_intron		14	1	34219595	1455
ENSMUSG00000018574	protein_coding	Acadvl	ENSMUST00000146129	retained_intron		11	-1	70012574	696
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000146705	processed_transcript		1	1	75383556	346
ENSMUSG00000087163	antisense	Gm16230	ENSMUST00000155550	antisense		10	-1	127676724	521
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000125118	retained_intron		1	1	75384700	616
ENSMUSG00000042428	protein_coding	Mgat3	ENSMUST00000044970	protein_coding	principal1	15	1	80173721	4665
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000132228	nonsense_mediated_decay		1	1	75384828	643
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000132222	processed_transcript		1	1	75385512	1472
ENSMUSG00000036915	protein_coding	Kirrel2	ENSMUST00000045817	protein_coding	principal1	7	-1	30457515	3352
ENSMUSG00000018574	protein_coding	Acadvl	ENSMUST00000156733	retained_intron		11	-1	70015377	858
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000137868	protein_coding		1	1	75385610	9885
ENSMUSG00000018574	protein_coding	Acadvl	ENSMUST00000137187	retained_intron		11	-1	70015411	769
ENSMUSG00000036915	protein_coding	Kirrel2	ENSMUST00000170152	protein_coding		7	-1	30450864	575
ENSMUSG00000018574	protein_coding	Acadvl	ENSMUST00000145478	retained_intron		11	-1	70015399	749
ENSMUSG00000047797	protein_coding	Gjb1	ENSMUST00000119080	protein_coding	principal1	X	1	101376378	1513
ENSMUSG00000047878	protein_coding	A4galt	ENSMUST00000049530	protein_coding	principal1	15	-1	83251774	2092
ENSMUSG00000036915	protein_coding	Kirrel2	ENSMUST00000169893	protein_coding		7	-1	30456482	930
ENSMUSG00000047797	protein_coding	Gjb1	ENSMUST00000052130	protein_coding	principal1	X	1	101377273	1565
ENSMUSG00000006494	protein_coding	Pdk1	ENSMUST00000156036	processed_transcript		2	1	71873346	2972
ENSMUSG00000036915	protein_coding	Kirrel2	ENSMUST00000117923	processed_transcript		7	-1	30457690	343
ENSMUSG00000047797	protein_coding	Gjb1	ENSMUST00000119190	protein_coding	principal1	X	1	101383736	1585
ENSMUSG00000113228	lincRNA	4930471E15Rik	ENSMUST00000221147	lincRNA		12	1	65182380	626
ENSMUSG00000006494	protein_coding	Pdk1	ENSMUST00000151358	processed_transcript		2	1	71873743	777
ENSMUSG00000047878	protein_coding	A4galt	ENSMUST00000164614	protein_coding	principal1	15	-1	83251731	1974
ENSMUSG00000006494	protein_coding	Pdk1	ENSMUST00000152696	processed_transcript		2	1	71873320	795
ENSMUSG00000043289	protein_coding	Mei4	ENSMUST00000057067	protein_coding	principal2	9	1	81863670	2670
ENSMUSG00000006494	protein_coding	Pdk1	ENSMUST00000129887	processed_transcript		2	1	71875079	680
ENSMUSG00000024146	protein_coding	Cript	ENSMUST00000024959	protein_coding	principal1	17	1	87025550	1184
ENSMUSG00000047878	protein_coding	A4galt	ENSMUST00000229687	protein_coding		15	-1	83251729	375
ENSMUSG00000006494	protein_coding	Pdk1	ENSMUST00000148249	processed_transcript		2	1	71873551	2596
ENSMUSG00000043289	protein_coding	Mei4	ENSMUST00000189832	protein_coding	alternative2	9	1	81863705	2578
ENSMUSG00000047878	protein_coding	A4galt	ENSMUST00000229454	retained_intron		15	-1	83251729	360
ENSMUSG00000006494	protein_coding	Pdk1	ENSMUST00000134362	processed_transcript		2	1	71873326	1060
ENSMUSG00000024146	protein_coding	Cript	ENSMUST00000160824	retained_intron		17	1	87025610	660
ENSMUSG00000006494	protein_coding	Pdk1	ENSMUST00000129427	processed_transcript		2	1	71887418	327
ENSMUSG00000043289	protein_coding	Mei4	ENSMUST00000189391	protein_coding	alternative2	9	1	81863709	1817
ENSMUSG00000024146	protein_coding	Cript	ENSMUST00000160269	processed_transcript		17	1	87025611	763
ENSMUSG00000097241	antisense	Gm26907	ENSMUST00000181794	antisense		9	-1	81858891	729
ENSMUSG00000056824	protein_coding	Zfp663	ENSMUST00000103085	protein_coding	principal1	2	-1	165368729	3451
ENSMUSG00000056824	protein_coding	Zfp663	ENSMUST00000141140	protein_coding		2	-1	165368723	668
ENSMUSG00000071035	processed_pseudogene	Gm5499	ENSMUST00000090731	processed_pseudogene		17	1	87078271	885
ENSMUSG00000103536	TEC	Gm37837	ENSMUST00000191743	TEC		9	1	82028580	604
ENSMUSG00000056824	protein_coding	Zfp663	ENSMUST00000136482	processed_transcript		2	-1	165359401	776
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000113589	protein_coding		1	1	75400085	833
ENSMUSG00000115962	TEC	4930588D02Rik	ENSMUST00000231034	TEC		15	-1	80228414	464
ENSMUSG00000002147	protein_coding	Stat6	ENSMUST00000092074	protein_coding	principal1	10	1	127642986	3775
ENSMUSG00000056824	protein_coding	Zfp663	ENSMUST00000073062	protein_coding	principal1	2	-1	165360136	3157
ENSMUSG00000111697	lincRNA	Gm35548	ENSMUST00000214348	lincRNA		9	-1	82260208	441
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000113588	protein_coding		1	1	75400521	1078
ENSMUSG00000082687	processed_pseudogene	Gm11474	ENSMUST00000120814	processed_pseudogene		2	-1	167535442	277
ENSMUSG00000002147	protein_coding	Stat6	ENSMUST00000120279	protein_coding		10	1	127643002	609
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000113587	protein_coding		1	1	75400635	1254
ENSMUSG00000116127	processed_pseudogene	Gm8375	ENSMUST00000229937	processed_pseudogene		15	-1	80229923	797
ENSMUSG00000002147	protein_coding	Stat6	ENSMUST00000128072	retained_intron		10	1	127653079	341
ENSMUSG00000032796	protein_coding	Lama1	ENSMUST00000035471	protein_coding	principal1	17	1	67697259	9526
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000122266	protein_coding		1	1	75401010	917
ENSMUSG00000099266	lincRNA	1700063H06Rik	ENSMUST00000183678	lincRNA		9	1	82260293	445
ENSMUSG00000002147	protein_coding	Stat6	ENSMUST00000156231	retained_intron		10	1	127656761	768
ENSMUSG00000002147	protein_coding	Stat6	ENSMUST00000145470	retained_intron		10	1	127659400	698
ENSMUSG00000026207	protein_coding	Speg	ENSMUST00000143679	retained_intron		1	1	75423510	735
ENSMUSG00000098420	processed_pseudogene	Gm27249	ENSMUST00000185049	processed_pseudogene		9	1	82524991	328
ENSMUSG00000040195	protein_coding	Nemp1	ENSMUST00000133505	processed_transcript		10	1	127666901	358
ENSMUSG00000086053	antisense	Gm15178	ENSMUST00000132100	antisense		1	-1	75396363	472
ENSMUSG00000005465	protein_coding	Il27ra	ENSMUST00000005601	protein_coding	principal1	8	-1	84042589	2664
ENSMUSG00000040195	protein_coding	Nemp1	ENSMUST00000124388	processed_transcript		10	1	127667123	695
ENSMUSG00000037104	protein_coding	Socs5	ENSMUST00000041369	protein_coding	principal1	17	1	87107679	4648
ENSMUSG00000037104	protein_coding	Socs5	ENSMUST00000234803	protein_coding		17	1	87107691	978
ENSMUSG00000032796	protein_coding	Lama1	ENSMUST00000233821	retained_intron		17	1	67697265	2500
ENSMUSG00000037104	protein_coding	Socs5	ENSMUST00000234421	processed_transcript		17	1	87107858	2019
ENSMUSG00000005465	protein_coding	Il27ra	ENSMUST00000210245	processed_transcript		8	-1	84042569	2931
ENSMUSG00000005465	protein_coding	Il27ra	ENSMUST00000210790	retained_intron		8	-1	84042540	527
ENSMUSG00000080825	processed_pseudogene	Gm14892	ENSMUST00000117636	processed_pseudogene		X	-1	104001337	267
ENSMUSG00000047986	protein_coding	Palm3	ENSMUST00000142367	retained_intron		8	1	84021471	2386
ENSMUSG00000117384	lincRNA	C330024C12Rik	ENSMUST00000234580	lincRNA		17	-1	87194942	1396
ENSMUSG00000036292	protein_coding	Gramd1c	ENSMUST00000036174	protein_coding		16	-1	44016436	3501
ENSMUSG00000032796	protein_coding	Lama1	ENSMUST00000233224	processed_transcript		17	1	67812406	565
ENSMUSG00000047986	protein_coding	Palm3	ENSMUST00000055077	protein_coding	principal1	8	1	84021471	2452
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000203014	retained_intron		6	-1	148843654	1163
ENSMUSG00000036292	protein_coding	Gramd1c	ENSMUST00000114677	protein_coding		16	-1	44027945	3271
ENSMUSG00000047986	protein_coding	Palm3	ENSMUST00000154171	retained_intron		8	1	84026075	393
ENSMUSG00000087152	processed_pseudogene	Cldn34-ps	ENSMUST00000145498	processed_pseudogene		X	-1	77675435	600
ENSMUSG00000036292	protein_coding	Gramd1c	ENSMUST00000214098	protein_coding	principal1	16	-1	44063345	2046
ENSMUSG00000114179	processed_pseudogene	Eif1-ps2	ENSMUST00000221990	processed_pseudogene		13	1	64913972	339
ENSMUSG00000081358	processed_pseudogene	Gm14746	ENSMUST00000120309	processed_pseudogene		X	-1	77717983	741
ENSMUSG00000036292	protein_coding	Gramd1c	ENSMUST00000216149	processed_transcript		16	-1	44061545	1144
ENSMUSG00000081256	processed_pseudogene	Gm15791	ENSMUST00000120365	processed_pseudogene		5	1	110328204	319
ENSMUSG00000082842	unprocessed_pseudogene	Gm14748	ENSMUST00000119819	unprocessed_pseudogene		X	1	77733668	411
ENSMUSG00000036292	protein_coding	Gramd1c	ENSMUST00000214764	retained_intron		16	-1	44063325	374
ENSMUSG00000032251	protein_coding	Irak1bp1	ENSMUST00000113245	protein_coding	principal1	9	1	82829540	2158
ENSMUSG00000081164	processed_pseudogene	Gm8722	ENSMUST00000121466	processed_pseudogene		X	-1	77758146	769
ENSMUSG00000036292	protein_coding	Gramd1c	ENSMUST00000179565	protein_coding		16	-1	44013039	3159
ENSMUSG00000032251	protein_coding	Irak1bp1	ENSMUST00000034783	protein_coding		9	1	82829806	1159
ENSMUSG00000056223	protein_coding	Spata31	ENSMUST00000070216	protein_coding	principal1	13	1	64917406	3232
ENSMUSG00000027967	protein_coding	Neurog2	ENSMUST00000029587	protein_coding	principal1	3	1	127633135	2227
ENSMUSG00000082845	processed_pseudogene	Gm13879	ENSMUST00000118308	processed_pseudogene		2	-1	103843656	242
ENSMUSG00000056223	protein_coding	Spata31	ENSMUST00000221202	protein_coding		13	1	64917454	814
ENSMUSG00000083643	processed_pseudogene	Gm13876	ENSMUST00000118451	processed_pseudogene		2	1	103888324	261
ENSMUSG00000113263	processed_pseudogene	Gm4811	ENSMUST00000220879	processed_pseudogene		13	-1	64929161	1220
ENSMUSG00000084756	lincRNA	Gm13881	ENSMUST00000149025	lincRNA		2	1	103912024	3716
ENSMUSG00000113807	processed_pseudogene	Gm6888	ENSMUST00000221983	processed_pseudogene		13	1	64998934	706
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182129	protein_coding		17	1	47505051	952
ENSMUSG00000040195	protein_coding	Nemp1	ENSMUST00000118728	protein_coding	alternative2	10	1	127667144	2362
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000183210	protein_coding		17	1	47505079	299
ENSMUSG00000040195	protein_coding	Nemp1	ENSMUST00000142580	processed_transcript		10	1	127667166	355
ENSMUSG00000041479	protein_coding	Syt15	ENSMUST00000119693	protein_coding	alternative2	14	1	34220046	1801
ENSMUSG00000040195	protein_coding	Nemp1	ENSMUST00000118612	protein_coding		10	1	127677064	1522
ENSMUSG00000041479	protein_coding	Syt15	ENSMUST00000035351	protein_coding	principal3	14	1	34220047	3623
ENSMUSG00000040195	protein_coding	Nemp1	ENSMUST00000048099	protein_coding	principal2	10	1	127677066	6002
ENSMUSG00000032394	protein_coding	Igdcc3	ENSMUST00000034961	protein_coding	principal2	9	1	65141189	3146
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000183044	protein_coding	principal1	17	1	47505119	2064
ENSMUSG00000099746	sense_intronic	Ppnr	ENSMUST00000190974	sense_intronic		19	1	55841672	3525
ENSMUSG00000032394	protein_coding	Igdcc3	ENSMUST00000217371	protein_coding	alternative2	9	1	65141212	3183
ENSMUSG00000032394	protein_coding	Igdcc3	ENSMUST00000217135	retained_intron		9	1	65180738	762
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000099514	protein_coding	principal1	19	-1	32388512	3665
ENSMUSG00000116416	processed_pseudogene	Gm32886	ENSMUST00000230161	processed_pseudogene		15	-1	83258097	150
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000142618	protein_coding	principal1	19	-1	32349316	4036
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000037333	protein_coding	principal1	17	1	47505128	1999
ENSMUSG00000027624	protein_coding	Epb41l1	ENSMUST00000103137	protein_coding		2	1	156420909	6490
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000183177	protein_coding	principal1	17	1	47505149	2060
ENSMUSG00000027624	protein_coding	Epb41l1	ENSMUST00000109574	protein_coding		2	1	156421048	5904
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182848	protein_coding		17	1	47505156	926
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182591	retained_intron		17	1	47505162	283
ENSMUSG00000027624	protein_coding	Epb41l1	ENSMUST00000142048	retained_intron		2	1	156421052	3643
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182060	retained_intron		17	1	47505219	754
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182935	protein_coding		17	1	47505231	277
ENSMUSG00000027624	protein_coding	Epb41l1	ENSMUST00000125153	protein_coding		2	1	156421084	8344
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000236410	nonsense_mediated_decay		19	-1	32276964	2593
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000183014	retained_intron		17	1	47505240	552
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000183061	retained_intron		17	1	47505241	2670
ENSMUSG00000027624	protein_coding	Epb41l1	ENSMUST00000103136	protein_coding		2	1	156421101	6249
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182506	protein_coding		17	1	47505241	853
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000152340	nonsense_mediated_decay		19	-1	32276952	1986
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182281	retained_intron		17	1	47593436	3858
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000134415	nonsense_mediated_decay		19	-1	32160223	1595
ENSMUSG00000027624	protein_coding	Epb41l1	ENSMUST00000109577	protein_coding	principal1	2	1	156421112	6251
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182209	protein_coding	principal1	17	1	47593470	1977
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000124012	retained_intron		19	-1	32389714	2566
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182874	protein_coding		17	1	47593529	484
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000151822	protein_coding		19	-1	32196428	427
ENSMUSG00000027624	protein_coding	Epb41l1	ENSMUST00000029155	protein_coding		2	1	156475534	6521
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000149107	processed_transcript		19	-1	32238812	358
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000183158	protein_coding		17	1	47594313	385
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000141655	processed_transcript		19	-1	32323229	603
ENSMUSG00000027624	protein_coding	Epb41l1	ENSMUST00000144013	protein_coding		2	1	156506394	640
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182846	protein_coding		17	1	47594756	464
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000131768	processed_transcript		19	-1	32276926	353
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000149934	processed_transcript		19	-1	32248009	483
ENSMUSG00000027624	protein_coding	Epb41l1	ENSMUST00000137067	retained_intron		2	1	156533507	820
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000124483	retained_intron		19	-1	32289579	3086
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000126332	retained_intron		19	-1	32238826	357
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000141252	retained_intron		19	-1	32388463	676
ENSMUSG00000025402	protein_coding	Nab2	ENSMUST00000026469	protein_coding	principal3	10	-1	127666710	2582
ENSMUSG00000040451	protein_coding	Sgms1	ENSMUST00000151289	protein_coding	principal1	19	-1	32211013	3262
ENSMUSG00000026304	protein_coding	Rab17	ENSMUST00000027529	protein_coding	principal1	1	-1	90969661	1831
ENSMUSG00000097787	bidirectional_promoter_lncRNA	2700046G09Rik	ENSMUST00000181612	bidirectional_promoter_lncRNA		19	1	32389216	1647
ENSMUSG00000118064	sense_intronic	Gm50210	ENSMUST00000235377	sense_intronic		19	-1	32209273	2705
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000182539	protein_coding		17	1	47596068	931
ENSMUSG00000026304	protein_coding	Rab17	ENSMUST00000131428	protein_coding	principal1	1	-1	90967667	1557
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000183256	protein_coding		17	1	47596324	560
ENSMUSG00000025402	protein_coding	Nab2	ENSMUST00000099157	protein_coding	alternative1	10	-1	127666632	2311
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000183206	protein_coding		17	1	47597164	336
ENSMUSG00000034165	protein_coding	Ccnd3	ENSMUST00000171031	protein_coding	principal1	17	1	47505051	2113
ENSMUSG00000025402	protein_coding	Nab2	ENSMUST00000128780	protein_coding		10	-1	127665481	400
ENSMUSG00000115467	protein_coding	Vmn1r37	ENSMUST00000226974	protein_coding	principal2	6	1	66729382	1770
ENSMUSG00000026304	protein_coding	Rab17	ENSMUST00000135819	processed_transcript		1	-1	90967617	628
ENSMUSG00000025402	protein_coding	Nab2	ENSMUST00000129252	protein_coding		10	-1	127668568	386
ENSMUSG00000115467	protein_coding	Vmn1r37	ENSMUST00000226311	protein_coding		6	1	66729382	1305
ENSMUSG00000035725	protein_coding	Prkx	ENSMUST00000036333	protein_coding	principal1	X	-1	77796278	4146
ENSMUSG00000026304	protein_coding	Rab17	ENSMUST00000130042	protein_coding		1	-1	90969644	611
ENSMUSG00000115467	protein_coding	Vmn1r37	ENSMUST00000228791	protein_coding	alternative2	6	1	66729382	1617
ENSMUSG00000115467	protein_coding	Vmn1r37	ENSMUST00000227923	protein_coding	principal2	6	1	66729739	1773
ENSMUSG00000026304	protein_coding	Rab17	ENSMUST00000128226	processed_transcript		1	-1	90969548	960
ENSMUSG00000035725	protein_coding	Prkx	ENSMUST00000114044	protein_coding		X	-1	77795972	2639
ENSMUSG00000104772	processed_pseudogene	Gm43347	ENSMUST00000200226	processed_pseudogene		3	-1	82672567	580
ENSMUSG00000115467	protein_coding	Vmn1r37	ENSMUST00000226886	protein_coding		6	1	66729739	1308
ENSMUSG00000115467	protein_coding	Vmn1r37	ENSMUST00000077482	protein_coding	principal2	6	1	66731392	909
ENSMUSG00000100791	lincRNA	Gm28199	ENSMUST00000187127	lincRNA		1	-1	90975260	619
ENSMUSG00000104898	lincRNA	Gm30043	ENSMUST00000196689	lincRNA		3	1	82754524	733
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000111569	protein_coding	principal2	6	-1	148896237	3697
ENSMUSG00000105034	lincRNA	Gm43348	ENSMUST00000197867	lincRNA		3	-1	82812234	530
ENSMUSG00000024207	protein_coding	Acsbg2	ENSMUST00000043062	protein_coding	principal1	17	-1	56874447	2609
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000127941	protein_coding		6	-1	148851396	1035
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000072324	protein_coding	alternative2	6	-1	148896150	2952
ENSMUSG00000051180	protein_coding	Olfr522	ENSMUST00000050585	protein_coding	principal1	7	-1	140164764	4766
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000132535	retained_intron		6	-1	148849184	3294
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000034787	protein_coding	principal1	9	-1	82975516	10756
ENSMUSG00000031513	protein_coding	Leprotl1	ENSMUST00000033910	protein_coding	principal1	8	-1	34147033	2879
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000151640	processed_transcript		6	-1	148851367	554
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000154971	processed_transcript		6	-1	148860588	925
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000139914	protein_coding		6	-1	148895459	739
ENSMUSG00000113233	lincRNA	Gm31063	ENSMUST00000222636	lincRNA		12	-1	65213501	580
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000190774	retained_intron		9	-1	82896372	3830
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000204564	retained_intron		6	-1	148890827	6291
ENSMUSG00000107721	processed_pseudogene	Gm44261	ENSMUST00000203337	processed_pseudogene		6	-1	66734177	209
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000189209	retained_intron		9	-1	82892188	3286
ENSMUSG00000032392	protein_coding	Parp16	ENSMUST00000216702	protein_coding	principal1	9	1	65195353	1643
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000204942	processed_transcript		6	-1	148896162	598
ENSMUSG00000030309	protein_coding	Caprin2	ENSMUST00000122909	processed_transcript		6	-1	148895609	740
ENSMUSG00000023988	protein_coding	Bysl	ENSMUST00000024783	protein_coding	principal1	17	-1	47611492	3854
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000211554	protein_coding	principal3	8	1	88697047	4638
ENSMUSG00000032392	protein_coding	Parp16	ENSMUST00000069000	protein_coding	principal1	9	1	65214690	2482
ENSMUSG00000051051	protein_coding	Olfr523	ENSMUST00000213953	protein_coding	alternative2	7	1	140173217	3445
ENSMUSG00000098083	processed_pseudogene	Gm8957	ENSMUST00000182082	processed_pseudogene		3	-1	14512095	1012
ENSMUSG00000051051	protein_coding	Olfr523	ENSMUST00000216023	protein_coding	alternative2	7	1	140173235	3940
ENSMUSG00000032392	protein_coding	Parp16	ENSMUST00000216486	nonsense_mediated_decay		9	1	65214776	1714
ENSMUSG00000095048	protein_coding	Gm11239	ENSMUST00000171348	protein_coding	principal1	4	1	73668354	1322
ENSMUSG00000032392	protein_coding	Parp16	ENSMUST00000213396	protein_coding	principal1	9	1	65215145	2518
ENSMUSG00000095048	protein_coding	Gm11239	ENSMUST00000179977	protein_coding		4	1	73669168	1080
ENSMUSG00000032392	protein_coding	Parp16	ENSMUST00000213766	retained_intron		9	1	65215154	1445
ENSMUSG00000051051	protein_coding	Olfr523	ENSMUST00000209314	protein_coding	alternative2	7	1	140173217	3677
ENSMUSG00000093839	protein_coding	Olfr462	ENSMUST00000213928	protein_coding	principal1	11	-1	87892268	5598
ENSMUSG00000110247	processed_pseudogene	Gm45269	ENSMUST00000210359	processed_pseudogene		8	1	34152690	282
ENSMUSG00000051051	protein_coding	Olfr523	ENSMUST00000215785	protein_coding	alternative2	7	1	140173235	4165
ENSMUSG00000007080	protein_coding	Pole	ENSMUST00000007296	protein_coding	principal1	5	1	110286306	7163
ENSMUSG00000093839	protein_coding	Olfr462	ENSMUST00000213672	protein_coding	principal1	11	-1	87892247	2021
ENSMUSG00000108231	processed_pseudogene	Gm4045	ENSMUST00000204076	processed_pseudogene		6	1	66746017	310
ENSMUSG00000051051	protein_coding	Olfr523	ENSMUST00000214272	protein_coding	alternative2	7	1	140173235	3780
ENSMUSG00000007080	protein_coding	Pole	ENSMUST00000112482	protein_coding		5	1	110286341	747
ENSMUSG00000093839	protein_coding	Olfr462	ENSMUST00000049743	protein_coding	principal1	11	-1	87889894	936
ENSMUSG00000051051	protein_coding	Olfr523	ENSMUST00000055890	protein_coding	principal2	7	1	140176061	1056
ENSMUSG00000007080	protein_coding	Pole	ENSMUST00000131887	retained_intron		5	1	110286377	4480
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000209532	protein_coding	alternative1	8	1	88697060	7990
ENSMUSG00000007080	protein_coding	Pole	ENSMUST00000182442	retained_intron		5	1	110317044	2134
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000209742	processed_transcript		8	1	88697061	1477
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000209559	protein_coding	principal3	8	1	88697075	4476
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000209206	protein_coding		8	1	88702306	4032
ENSMUSG00000093920	protein_coding	Olfr463	ENSMUST00000215150	protein_coding	principal1	11	-1	87897387	2031
ENSMUSG00000093920	protein_coding	Olfr463	ENSMUST00000217095	protein_coding	principal1	11	-1	87897240	1977
ENSMUSG00000093920	protein_coding	Olfr463	ENSMUST00000081417	protein_coding	principal1	11	-1	87893922	936
ENSMUSG00000007080	protein_coding	Pole	ENSMUST00000152495	retained_intron		5	1	110327619	1766
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000209722	retained_intron		8	1	88729273	3119
ENSMUSG00000007080	protein_coding	Pole	ENSMUST00000112481	protein_coding		5	1	110330697	1523
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000210302	retained_intron		8	1	88729558	2214
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000211671	retained_intron		8	1	88735111	3096
ENSMUSG00000007080	protein_coding	Pole	ENSMUST00000141506	retained_intron		5	1	110333486	1723
ENSMUSG00000085606	antisense	Gm15792	ENSMUST00000137099	antisense		5	-1	110333203	769
ENSMUSG00000042254	protein_coding	Cilp	ENSMUST00000048762	protein_coding	principal1	9	1	65265180	4153
ENSMUSG00000042254	protein_coding	Cilp	ENSMUST00000141382	nonsense_mediated_decay		9	1	65265823	4128
ENSMUSG00000038147	protein_coding	Cd84	ENSMUST00000155802	protein_coding	principal3	1	1	171839697	3291
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000124939	processed_transcript		5	-1	38206183	2868
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000109626	protein_coding	principal3	8	1	88705222	7945
ENSMUSG00000028961	protein_coding	Pgd	ENSMUST00000084124	protein_coding	principal1	4	-1	149166707	2218
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000098519	protein_coding	alternative1	8	1	88705222	7954
ENSMUSG00000028961	protein_coding	Pgd	ENSMUST00000124409	retained_intron		4	-1	149159999	3644
ENSMUSG00000038147	protein_coding	Cd84	ENSMUST00000135386	protein_coding	alternative2	1	1	171840565	3434
ENSMUSG00000038147	protein_coding	Cd84	ENSMUST00000136479	protein_coding	alternative2	1	1	171840621	1503
ENSMUSG00000036712	protein_coding	Cyld	ENSMUST00000043526	protein_coding	alternative1	8	1	88697028	8022
ENSMUSG00000041237	protein_coding	Pklr	ENSMUST00000047111	protein_coding		3	1	89136142	2787
ENSMUSG00000028961	protein_coding	Pgd	ENSMUST00000156120	retained_intron		4	-1	149166771	828
ENSMUSG00000028961	protein_coding	Pgd	ENSMUST00000137982	retained_intron		4	-1	149161654	687
ENSMUSG00000038147	protein_coding	Cd84	ENSMUST00000128189	processed_transcript		1	1	171839721	454
ENSMUSG00000108137	lincRNA	Gm44053	ENSMUST00000203364	lincRNA		6	1	113725223	929
ENSMUSG00000028961	protein_coding	Pgd	ENSMUST00000143944	retained_intron		4	-1	149166660	641
ENSMUSG00000041237	protein_coding	Pklr	ENSMUST00000151591	processed_transcript		3	1	89136174	345
ENSMUSG00000038147	protein_coding	Cd84	ENSMUST00000042302	protein_coding	principal3	1	1	171840633	1019
ENSMUSG00000041237	protein_coding	Pklr	ENSMUST00000107482	protein_coding	principal1	3	1	89136572	2902
ENSMUSG00000071226	protein_coding	Cecr2	ENSMUST00000148346	retained_intron		6	1	120666369	4392
ENSMUSG00000041237	protein_coding	Pklr	ENSMUST00000127058	protein_coding		3	1	89136579	349
ENSMUSG00000041237	protein_coding	Pklr	ENSMUST00000148097	processed_transcript		3	1	89136623	338
ENSMUSG00000114988	antisense	Gm49226	ENSMUST00000227036	antisense		16	1	85148829	433
ENSMUSG00000115469	antisense	Gm49227	ENSMUST00000227918	antisense		16	1	85080111	998
ENSMUSG00000114942	protein_coding	Gm49361	ENSMUST00000174694	nonsense_mediated_decay	principal1	14	-1	57746103	3287
ENSMUSG00000038936	protein_coding	Sccpdh	ENSMUST00000040538	protein_coding	principal1	1	1	179668210	1948
ENSMUSG00000092358	processed_pseudogene	Gm20430	ENSMUST00000172474	processed_pseudogene		14	1	57698013	207
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000188868	retained_intron		9	-1	82975408	3317
ENSMUSG00000028051	protein_coding	Hcn3	ENSMUST00000029686	protein_coding	principal1	3	-1	89160196	4002
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000190101	retained_intron		9	-1	82896092	1481
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000190936	retained_intron		9	-1	82901113	3949
ENSMUSG00000028051	protein_coding	Hcn3	ENSMUST00000132156	retained_intron		3	-1	89151232	909
ENSMUSG00000028051	protein_coding	Hcn3	ENSMUST00000127654	retained_intron		3	-1	89151214	533
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000186089	nonsense_mediated_decay		9	-1	82932575	1924
ENSMUSG00000028051	protein_coding	Hcn3	ENSMUST00000133368	processed_transcript		3	-1	89159980	627
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000188850	retained_intron		9	-1	82908965	5523
ENSMUSG00000038936	protein_coding	Sccpdh	ENSMUST00000134287	nonsense_mediated_decay		1	1	179668210	1818
ENSMUSG00000017400	protein_coding	Stac2	ENSMUST00000017544	protein_coding	principal1	11	-1	98053462	3050
ENSMUSG00000038936	protein_coding	Sccpdh	ENSMUST00000131039	retained_intron		1	1	179668260	3561
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000187021	retained_intron		9	-1	82975426	2623
ENSMUSG00000038936	protein_coding	Sccpdh	ENSMUST00000144480	protein_coding		1	1	179680518	660
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000190822	nonsense_mediated_decay		9	-1	82927119	611
ENSMUSG00000017400	protein_coding	Stac2	ENSMUST00000131519	protein_coding		11	-1	98043542	550
ENSMUSG00000038936	protein_coding	Sccpdh	ENSMUST00000143936	protein_coding		1	1	179680547	527
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000186099	retained_intron		9	-1	82917609	1794
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000189927	retained_intron		9	-1	82928151	890
ENSMUSG00000038936	protein_coding	Sccpdh	ENSMUST00000192611	retained_intron		1	1	179683845	2989
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000189985	protein_coding		9	-1	82974268	1629
ENSMUSG00000108676	lincRNA	1700123J17Rik	ENSMUST00000206035	lincRNA		7	-1	126248238	1805
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000190405	retained_intron		9	-1	82933032	596
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000188828	retained_intron		9	-1	82975416	1979
ENSMUSG00000032253	protein_coding	Phip	ENSMUST00000190838	retained_intron		9	-1	82975419	4274
ENSMUSG00000054277	protein_coding	Arfgap3	ENSMUST00000067215	protein_coding	principal2	15	-1	83350247	2619
ENSMUSG00000108309	processed_pseudogene	Gm44703	ENSMUST00000205724	processed_pseudogene		7	-1	126242627	248
ENSMUSG00000111839	lincRNA	Gm39383	ENSMUST00000216894	lincRNA		9	1	83008603	1009
ENSMUSG00000054277	protein_coding	Arfgap3	ENSMUST00000226816	processed_transcript		15	-1	83305341	1186
ENSMUSG00000027487	protein_coding	Cdk5rap1	ENSMUST00000109731	protein_coding	principal1	2	-1	154373010	2160
ENSMUSG00000032329	protein_coding	Hmg20a	ENSMUST00000034879	protein_coding	principal1	9	1	56418609	3778
ENSMUSG00000054277	protein_coding	Arfgap3	ENSMUST00000226124	protein_coding	alternative2	15	-1	83350174	2461
ENSMUSG00000099188	processed_pseudogene	Gm27248	ENSMUST00000184004	processed_pseudogene		9	-1	83073388	166
ENSMUSG00000054277	protein_coding	Arfgap3	ENSMUST00000226411	retained_intron		15	-1	83307066	493
ENSMUSG00000038717	protein_coding	Atp5l	ENSMUST00000216815	retained_intron		9	-1	44918866	6310
ENSMUSG00000032329	protein_coding	Hmg20a	ENSMUST00000215269	protein_coding	principal1	9	1	56418644	1700
ENSMUSG00000054277	protein_coding	Arfgap3	ENSMUST00000226764	protein_coding		15	-1	83306971	741
ENSMUSG00000027487	protein_coding	Cdk5rap1	ENSMUST00000148289	processed_transcript		2	-1	154372761	1649
ENSMUSG00000054277	protein_coding	Arfgap3	ENSMUST00000227511	retained_intron		15	-1	83333267	600
ENSMUSG00000032329	protein_coding	Hmg20a	ENSMUST00000213242	protein_coding		9	1	56418815	335
ENSMUSG00000027487	protein_coding	Cdk5rap1	ENSMUST00000109730	protein_coding		2	-1	154372731	1227
ENSMUSG00000111774	lincRNA	Gm38398	ENSMUST00000217211	lincRNA		9	1	83098224	584
ENSMUSG00000032329	protein_coding	Hmg20a	ENSMUST00000214771	protein_coding		9	1	56418820	3191
ENSMUSG00000027487	protein_coding	Cdk5rap1	ENSMUST00000150308	processed_transcript		2	-1	154370781	515
ENSMUSG00000021952	protein_coding	Xpo4	ENSMUST00000174545	protein_coding	principal2	14	-1	57665430	8680
ENSMUSG00000027487	protein_coding	Cdk5rap1	ENSMUST00000137918	processed_transcript		2	-1	154372691	392
ENSMUSG00000032329	protein_coding	Hmg20a	ENSMUST00000217518	protein_coding		9	1	56418824	2468
ENSMUSG00000027487	protein_coding	Cdk5rap1	ENSMUST00000152180	retained_intron		2	-1	154354344	936
ENSMUSG00000032329	protein_coding	Hmg20a	ENSMUST00000214869	protein_coding		9	1	56418830	1782
ENSMUSG00000027487	protein_coding	Cdk5rap1	ENSMUST00000028990	protein_coding	principal1	2	-1	154372719	1970
ENSMUSG00000118653	protein_coding	AC159819.1	ENSMUST00000239472	protein_coding	principal1	9	1	56437457	988
ENSMUSG00000022375	protein_coding	Lrrc6	ENSMUST00000023006	protein_coding	principal1	15	-1	66500910	2084
ENSMUSG00000029385	protein_coding	Ccng2	ENSMUST00000031331	protein_coding	principal1	5	1	93267257	2810
ENSMUSG00000038717	protein_coding	Atp5l	ENSMUST00000043675	protein_coding	principal1	9	-1	44920742	544
ENSMUSG00000029385	protein_coding	Ccng2	ENSMUST00000152097	processed_transcript		5	1	93267589	358
ENSMUSG00000038717	protein_coding	Atp5l	ENSMUST00000216380	processed_transcript		9	-1	44920707	295
ENSMUSG00000038717	protein_coding	Atp5l	ENSMUST00000213999	retained_intron		9	-1	44915085	608
ENSMUSG00000021952	protein_coding	Xpo4	ENSMUST00000174152	nonsense_mediated_decay		14	-1	57664992	2323
ENSMUSG00000111082	antisense	Gm30934	ENSMUST00000215803	antisense		9	1	44920199	815
ENSMUSG00000029385	protein_coding	Ccng2	ENSMUST00000153260	processed_transcript		5	1	93267601	690
ENSMUSG00000019951	protein_coding	Uhrf1bp1l	ENSMUST00000020112	protein_coding	principal1	10	1	89744991	6448
ENSMUSG00000029385	protein_coding	Ccng2	ENSMUST00000130183	retained_intron		5	1	93267639	4537
ENSMUSG00000042821	protein_coding	Snai1	ENSMUST00000052631	protein_coding	principal1	2	1	167538195	1621
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000094833	protein_coding	principal1	5	-1	38220457	2978
ENSMUSG00000019951	protein_coding	Uhrf1bp1l	ENSMUST00000219712	nonsense_mediated_decay		10	1	89745117	1924
ENSMUSG00000029385	protein_coding	Ccng2	ENSMUST00000121127	protein_coding	principal1	5	1	93268314	2570
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000126267	nonsense_mediated_decay		5	-1	38220413	2721
ENSMUSG00000019951	protein_coding	Uhrf1bp1l	ENSMUST00000220375	protein_coding		10	1	89745238	1839
ENSMUSG00000021952	protein_coding	Xpo4	ENSMUST00000172539	processed_transcript		14	-1	57664964	707
ENSMUSG00000059571	processed_pseudogene	Gm16218	ENSMUST00000155424	processed_pseudogene		9	-1	65297919	388
ENSMUSG00000021952	protein_coding	Xpo4	ENSMUST00000173940	retained_intron		14	-1	57665235	1893
ENSMUSG00000029385	protein_coding	Ccng2	ENSMUST00000149329	retained_intron		5	1	93268708	923
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000143436	nonsense_mediated_decay		5	-1	38220425	1654
ENSMUSG00000019951	protein_coding	Uhrf1bp1l	ENSMUST00000218776	nonsense_mediated_decay		10	1	89787200	4615
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000112059	protein_coding	alternative2	9	1	109038565	1910
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000136475	nonsense_mediated_decay		5	-1	38220425	2271
ENSMUSG00000086320	lincRNA	Gm12840	ENSMUST00000156081	lincRNA		4	1	117700188	627
ENSMUSG00000019951	protein_coding	Uhrf1bp1l	ENSMUST00000219749	retained_intron		10	1	89802597	698
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000138820	nonsense_mediated_decay		5	-1	38220427	2028
ENSMUSG00000021952	protein_coding	Xpo4	ENSMUST00000173172	retained_intron		14	-1	57664967	1765
ENSMUSG00000019951	protein_coding	Uhrf1bp1l	ENSMUST00000218607	protein_coding		10	1	89806715	1154
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000146859	protein_coding		5	-1	38203797	463
ENSMUSG00000021952	protein_coding	Xpo4	ENSMUST00000172524	nonsense_mediated_decay		14	-1	57665430	1078
ENSMUSG00000019951	protein_coding	Uhrf1bp1l	ENSMUST00000219117	retained_intron		10	1	89809678	664
ENSMUSG00000021952	protein_coding	Xpo4	ENSMUST00000172647	retained_intron		14	-1	57648657	947
ENSMUSG00000019951	protein_coding	Uhrf1bp1l	ENSMUST00000219819	processed_transcript		10	1	89811871	716
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000129161	nonsense_mediated_decay		5	-1	38213552	688
ENSMUSG00000021952	protein_coding	Xpo4	ENSMUST00000173638	retained_intron		14	-1	57664989	665
ENSMUSG00000046449	protein_coding	Nexmif	ENSMUST00000118314	protein_coding	alternative2	X	-1	104201185	11476
ENSMUSG00000071226	protein_coding	Cecr2	ENSMUST00000112686	protein_coding	principal2	6	1	120666421	9212
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000123106	nonsense_mediated_decay		5	-1	38220431	420
ENSMUSG00000021952	protein_coding	Xpo4	ENSMUST00000089482	protein_coding	alternative1	14	-1	57664956	3456
ENSMUSG00000066456	protein_coding	Hmgn3	ENSMUST00000189777	processed_transcript		9	-1	83110825	533
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000114113	protein_coding		5	-1	38220454	2645
ENSMUSG00000071226	protein_coding	Cecr2	ENSMUST00000135109	processed_transcript		6	1	120666535	641
ENSMUSG00000046449	protein_coding	Nexmif	ENSMUST00000056502	protein_coding	alternative2	X	-1	104201144	5211
ENSMUSG00000029127	protein_coding	Zbtb49	ENSMUST00000137577	retained_intron		5	-1	38220424	1337
ENSMUSG00000071226	protein_coding	Cecr2	ENSMUST00000100993	protein_coding	alternative2	6	1	120666582	4849
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000026737	protein_coding	principal3	9	1	109038585	1834
ENSMUSG00000046449	protein_coding	Nexmif	ENSMUST00000087879	protein_coding	principal2	X	-1	104201117	10891
ENSMUSG00000060787	protein_coding	Olfr464	ENSMUST00000216461	protein_coding	principal1	11	-1	87920962	2112
ENSMUSG00000071226	protein_coding	Cecr2	ENSMUST00000124634	processed_transcript		6	1	120734558	946
ENSMUSG00000071226	protein_coding	Cecr2	ENSMUST00000129803	protein_coding		6	1	120734625	704
ENSMUSG00000060787	protein_coding	Olfr464	ENSMUST00000217112	protein_coding	principal1	11	-1	87920962	2232
ENSMUSG00000071226	protein_coding	Cecr2	ENSMUST00000204732	retained_intron		6	1	120735756	3996
ENSMUSG00000060787	protein_coding	Olfr464	ENSMUST00000215062	processed_transcript		11	-1	87920967	2058
ENSMUSG00000095341	protein_coding	Gm428	ENSMUST00000084475	protein_coding	principal1	4	1	73683516	1322
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000198639	retained_intron		9	1	109038602	2010
ENSMUSG00000071226	protein_coding	Cecr2	ENSMUST00000143563	protein_coding		6	1	120758135	1071
ENSMUSG00000060787	protein_coding	Olfr464	ENSMUST00000214754	processed_transcript		11	-1	87920967	1938
ENSMUSG00000024209	protein_coding	Acsbg3	ENSMUST00000025048	protein_coding	principal1	17	1	56875477	2677
ENSMUSG00000060787	protein_coding	Olfr464	ENSMUST00000074874	protein_coding	principal1	11	-1	87915003	1084
ENSMUSG00000024209	protein_coding	Acsbg3	ENSMUST00000125425	retained_intron		17	1	56875503	943
ENSMUSG00000083135	processed_pseudogene	Gm11504	ENSMUST00000120211	processed_pseudogene		11	1	87931987	173
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000197099	protein_coding		9	1	109040416	742
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000198281	protein_coding		9	1	109040606	445
ENSMUSG00000044639	processed_pseudogene	Gm11507	ENSMUST00000156462	processed_pseudogene		11	1	87944403	412
ENSMUSG00000050908	protein_coding	Tvp23a	ENSMUST00000051118	protein_coding	principal1	16	-1	10447362	3315
ENSMUSG00000035560	protein_coding	Wdr20rt	ENSMUST00000046331	protein_coding	principal1	12	1	65225517	2228
ENSMUSG00000108254	TEC	Gm43908	ENSMUST00000205074	TEC		6	-1	148900638	1472
ENSMUSG00000035560	protein_coding	Wdr20rt	ENSMUST00000221658	protein_coding		12	1	65225524	1570
ENSMUSG00000035560	protein_coding	Wdr20rt	ENSMUST00000221980	protein_coding		12	1	65225721	1667
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000042692	protein_coding	principal3	17	-1	28080587	1989
ENSMUSG00000095288	processed_pseudogene	Gm7618	ENSMUST00000121643	processed_pseudogene		6	-1	148901138	171
ENSMUSG00000050908	protein_coding	Tvp23a	ENSMUST00000128288	nonsense_mediated_decay		16	-1	10447144	741
ENSMUSG00000035560	protein_coding	Wdr20rt	ENSMUST00000222822	protein_coding		12	1	65226068	2257
ENSMUSG00000050908	protein_coding	Tvp23a	ENSMUST00000153027	processed_transcript		16	-1	10447327	724
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000198708	protein_coding		9	1	109051096	771
ENSMUSG00000050908	protein_coding	Tvp23a	ENSMUST00000135315	processed_transcript		16	-1	10429185	852
ENSMUSG00000093504	transcribed_unprocessed_pseudogene	Vmn1r-ps24	ENSMUST00000237175	processed_transcript		6	-1	66760039	2285
ENSMUSG00000021959	protein_coding	Lats2	ENSMUST00000022531	protein_coding	principal1	14	-1	57746123	5191
ENSMUSG00000050908	protein_coding	Tvp23a	ENSMUST00000141587	processed_transcript		16	-1	10429261	838
ENSMUSG00000093504	transcribed_unprocessed_pseudogene	Vmn1r-ps24	ENSMUST00000237702	processed_transcript		6	-1	66760039	2334
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000200629	protein_coding		9	1	109051155	369
ENSMUSG00000093504	transcribed_unprocessed_pseudogene	Vmn1r-ps24	ENSMUST00000236298	processed_transcript		6	-1	66760039	2021
ENSMUSG00000093504	transcribed_unprocessed_pseudogene	Vmn1r-ps24	ENSMUST00000236776	processed_transcript		6	-1	66760039	1972
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000114836	protein_coding	alternative2	17	-1	28080587	1752
ENSMUSG00000021959	protein_coding	Lats2	ENSMUST00000174213	nonsense_mediated_decay		14	-1	57746121	4001
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000200515	protein_coding		9	1	109051159	1005
ENSMUSG00000093504	transcribed_unprocessed_pseudogene	Vmn1r-ps24	ENSMUST00000175772	transcribed_unprocessed_pseudogene		6	-1	66754279	900
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000129046	protein_coding	principal3	17	-1	28080603	1948
ENSMUSG00000015357	protein_coding	Clpx	ENSMUST00000015501	protein_coding	principal3	9	1	65294260	2885
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000197689	protein_coding		9	1	109051180	347
ENSMUSG00000021959	protein_coding	Lats2	ENSMUST00000173990	protein_coding		14	-1	57746105	3834
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000233150	retained_intron		17	-1	28068791	1420
ENSMUSG00000021959	protein_coding	Lats2	ENSMUST00000173964	protein_coding		14	-1	57699890	866
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000196954	protein_coding		9	1	109051198	843
ENSMUSG00000015357	protein_coding	Clpx	ENSMUST00000148632	retained_intron		9	1	65294332	1279
ENSMUSG00000024212	protein_coding	Mllt1	ENSMUST00000025053	protein_coding	principal1	17	-1	56935415	3636
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000233665	nonsense_mediated_decay		17	-1	28070559	1033
ENSMUSG00000021959	protein_coding	Lats2	ENSMUST00000174166	protein_coding		14	-1	57758388	681
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000198376	protein_coding		9	1	109051200	365
ENSMUSG00000015357	protein_coding	Clpx	ENSMUST00000147279	protein_coding		9	1	65310152	577
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000233961	retained_intron		17	-1	28074821	1507
ENSMUSG00000024212	protein_coding	Mllt1	ENSMUST00000233829	processed_transcript		17	-1	56896674	413
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000197483	protein_coding		9	1	109051202	534
ENSMUSG00000024212	protein_coding	Mllt1	ENSMUST00000233854	processed_transcript		17	-1	56905746	652
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000198295	protein_coding		9	1	109051211	366
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000233587	retained_intron		17	-1	28078505	1978
ENSMUSG00000021959	protein_coding	Lats2	ENSMUST00000038381	protein_coding		14	-1	57734300	933
ENSMUSG00000046085	protein_coding	4931422A03Rik	ENSMUST00000123966	processed_transcript		2	-1	104027793	326
ENSMUSG00000022503	protein_coding	Nubp1	ENSMUST00000023146	protein_coding	principal1	16	1	10411948	2121
ENSMUSG00000028718	protein_coding	Stil	ENSMUST00000030490	protein_coding	principal1	4	1	115000159	5285
ENSMUSG00000024212	protein_coding	Mllt1	ENSMUST00000233063	processed_transcript		17	-1	56906221	671
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000232728	nonsense_mediated_decay		17	-1	28079746	1566
ENSMUSG00000021959	protein_coding	Lats2	ENSMUST00000077981	protein_coding		14	-1	57734300	786
ENSMUSG00000020483	protein_coding	Dynll2	ENSMUST00000020775	protein_coding	principal1	11	-1	87987533	2476
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000199868	protein_coding		9	1	109051435	563
ENSMUSG00000031532	protein_coding	Saraf	ENSMUST00000209470	processed_transcript		8	1	34154575	656
ENSMUSG00000089739	protein_coding	Gm20431	ENSMUST00000125544	protein_coding	principal1	2	-1	167661496	2367
ENSMUSG00000015357	protein_coding	Clpx	ENSMUST00000113824	protein_coding	alternative1	9	1	65294295	2809
ENSMUSG00000021959	protein_coding	Lats2	ENSMUST00000173732	protein_coding		14	-1	57744654	302
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000198591	processed_transcript		9	1	109052854	515
ENSMUSG00000020483	protein_coding	Dynll2	ENSMUST00000146941	nonsense_mediated_decay		11	-1	87987356	758
ENSMUSG00000046085	protein_coding	4931422A03Rik	ENSMUST00000056170	protein_coding	principal1	2	-1	104028308	1037
ENSMUSG00000022503	protein_coding	Nubp1	ENSMUST00000140157	nonsense_mediated_decay		16	1	10411949	750
ENSMUSG00000020483	protein_coding	Dynll2	ENSMUST00000107923	protein_coding	principal1	11	-1	87986585	2443
ENSMUSG00000021959	protein_coding	Lats2	ENSMUST00000173077	processed_transcript		14	-1	57746578	219
ENSMUSG00000078592	processed_pseudogene	Gm4609	ENSMUST00000106443	processed_pseudogene		3	-1	122231196	1002
ENSMUSG00000046085	protein_coding	4931422A03Rik	ENSMUST00000138867	retained_intron		2	-1	104028361	915
ENSMUSG00000020483	protein_coding	Dynll2	ENSMUST00000178105	protein_coding	principal1	11	-1	87984012	2187
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000233898	protein_coding	alternative2	17	-1	28079764	1705
ENSMUSG00000031532	protein_coding	Saraf	ENSMUST00000033933	protein_coding	alternative2	8	1	34154576	1860
ENSMUSG00000111712	lincRNA	Gm39363	ENSMUST00000214251	lincRNA		9	1	65332520	723
ENSMUSG00000028718	protein_coding	Stil	ENSMUST00000141933	nonsense_mediated_decay		4	1	115000182	5368
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000232798	protein_coding	alternative2	17	-1	28079784	1825
ENSMUSG00000110913	processed_pseudogene	Gm47192	ENSMUST00000215831	processed_pseudogene		9	-1	65342174	187
ENSMUSG00000108258	lincRNA	Gm43913	ENSMUST00000203924	lincRNA		6	-1	148920535	3029
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000154184	protein_coding		9	1	109054863	1038
ENSMUSG00000028718	protein_coding	Stil	ENSMUST00000129957	protein_coding		4	1	115000182	2162
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000233615	nonsense_mediated_decay		17	-1	28079928	1722
ENSMUSG00000031532	protein_coding	Saraf	ENSMUST00000211664	retained_intron		8	1	34154681	2351
ENSMUSG00000111725	processed_pseudogene	Gm19219	ENSMUST00000215863	processed_pseudogene		9	-1	65336897	724
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000200366	processed_transcript		9	1	109054948	697
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000233009	nonsense_mediated_decay		17	-1	28080014	1619
ENSMUSG00000066456	protein_coding	Hmgn3	ENSMUST00000187193	protein_coding		9	-1	83146470	855
ENSMUSG00000031532	protein_coding	Saraf	ENSMUST00000211637	processed_transcript		8	1	34158481	347
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000197194	processed_transcript		9	1	109055012	389
ENSMUSG00000090213	protein_coding	Tmem189	ENSMUST00000006587	protein_coding	principal1	2	-1	167661556	2329
ENSMUSG00000025647	protein_coding	Shisa5	ENSMUST00000199288	retained_intron		9	1	109055940	343
ENSMUSG00000066456	protein_coding	Hmgn3	ENSMUST00000185315	protein_coding		9	-1	83146530	1391
ENSMUSG00000031532	protein_coding	Saraf	ENSMUST00000239436	protein_coding	principal2	8	1	34154563	1897
ENSMUSG00000022503	protein_coding	Nubp1	ENSMUST00000129280	retained_intron		16	1	10411954	679
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000043925	protein_coding	alternative2	17	-1	28080639	1743
ENSMUSG00000113442	processed_pseudogene	Gm47973	ENSMUST00000222221	processed_pseudogene		12	1	65251710	199
ENSMUSG00000090213	protein_coding	Tmem189	ENSMUST00000148262	processed_transcript		2	-1	167689822	1837
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000123628	processed_transcript		17	-1	28068476	587
ENSMUSG00000028718	protein_coding	Stil	ENSMUST00000130401	processed_transcript		4	1	115010121	706
ENSMUSG00000090213	protein_coding	Tmem189	ENSMUST00000142148	retained_intron		2	-1	167645177	861
ENSMUSG00000022503	protein_coding	Nubp1	ENSMUST00000142771	retained_intron		16	1	10411970	3296
ENSMUSG00000075511	lincRNA	1700001L05Rik	ENSMUST00000178628	lincRNA		15	-1	83367282	4969
ENSMUSG00000113785	TEC	Gm47975	ENSMUST00000222655	TEC		12	1	65968376	226
ENSMUSG00000041642	protein_coding	Kif21b	ENSMUST00000075164	protein_coding	principal1	1	1	136131389	9115
ENSMUSG00000062859	protein_coding	Tcp11	ENSMUST00000233878	processed_transcript		17	-1	28080523	83
ENSMUSG00000028718	protein_coding	Stil	ENSMUST00000144316	retained_intron		4	1	115016184	688
ENSMUSG00000075511	lincRNA	1700001L05Rik	ENSMUST00000179705	lincRNA		15	-1	83367011	1260
ENSMUSG00000022503	protein_coding	Nubp1	ENSMUST00000156338	retained_intron		16	1	10412064	902
ENSMUSG00000090213	protein_coding	Tmem189	ENSMUST00000125874	retained_intron		2	-1	167661554	725
ENSMUSG00000028718	protein_coding	Stil	ENSMUST00000147519	nonsense_mediated_decay		4	1	115006761	622
ENSMUSG00000075511	lincRNA	1700001L05Rik	ENSMUST00000100370	lincRNA		15	-1	83367277	2270
ENSMUSG00000117120	processed_transcript	Gm50238	ENSMUST00000141806	processed_transcript		17	-1	28080295	496
ENSMUSG00000022503	protein_coding	Nubp1	ENSMUST00000143617	processed_transcript		16	1	10421236	510
ENSMUSG00000041642	protein_coding	Kif21b	ENSMUST00000130864	nonsense_mediated_decay		1	1	136131430	9254
ENSMUSG00000075511	lincRNA	1700001L05Rik	ENSMUST00000177890	lincRNA		15	-1	83365142	447
ENSMUSG00000066456	protein_coding	Hmgn3	ENSMUST00000161796	protein_coding		9	-1	83146605	862
ENSMUSG00000056501	protein_coding	Cebpb	ENSMUST00000070642	protein_coding	principal1	2	1	167688915	1504
ENSMUSG00000115170	protein_coding	Vmn1r38	ENSMUST00000227493	protein_coding	principal1	6	-1	66780634	3486
ENSMUSG00000041642	protein_coding	Kif21b	ENSMUST00000122892	retained_intron		1	1	136131454	2606
ENSMUSG00000115170	protein_coding	Vmn1r38	ENSMUST00000226457	protein_coding	principal1	6	-1	66782627	3462
ENSMUSG00000081511	processed_pseudogene	Gm11475	ENSMUST00000118482	processed_pseudogene		2	1	167591395	476
ENSMUSG00000108127	protein_coding	Gm12845	ENSMUST00000203629	protein_coding	principal5	4	1	117724412	1767
ENSMUSG00000115170	protein_coding	Vmn1r38	ENSMUST00000227694	protein_coding	principal1	6	-1	66777130	909
ENSMUSG00000041642	protein_coding	Kif21b	ENSMUST00000171381	nonsense_mediated_decay		1	1	136160358	583
ENSMUSG00000108127	protein_coding	Gm12845	ENSMUST00000204276	protein_coding	alternative2	4	1	117724475	1431
ENSMUSG00000066456	protein_coding	Hmgn3	ENSMUST00000162246	protein_coding	principal1	9	-1	83146685	983
ENSMUSG00000085596	processed_transcript	Gm11476	ENSMUST00000127006	processed_transcript		2	1	167553314	2019
ENSMUSG00000113531	processed_pseudogene	Gm2915	ENSMUST00000222565	processed_pseudogene		12	1	66269265	787
ENSMUSG00000041642	protein_coding	Kif21b	ENSMUST00000127624	retained_intron		1	1	136162949	1802
ENSMUSG00000066456	protein_coding	Hmgn3	ENSMUST00000190580	retained_intron		9	-1	83111131	560
ENSMUSG00000041642	protein_coding	Kif21b	ENSMUST00000165333	processed_transcript		1	1	136169314	701
ENSMUSG00000084260	processed_pseudogene	Gm12844	ENSMUST00000119463	processed_pseudogene		4	-1	117729299	582
ENSMUSG00000066456	protein_coding	Hmgn3	ENSMUST00000191105	retained_intron		9	-1	83112568	671
ENSMUSG00000066456	protein_coding	Hmgn3	ENSMUST00000190154	nonsense_mediated_decay		9	-1	83146517	546
ENSMUSG00000112143	lincRNA	Gm35721	ENSMUST00000220294	lincRNA		10	-1	77008569	2014
ENSMUSG00000066456	protein_coding	Hmgn3	ENSMUST00000185359	retained_intron		9	-1	83111093	256
ENSMUSG00000060499	protein_coding	Rpl10l	ENSMUST00000081908	protein_coding	principal1	12	-1	66284401	1023
ENSMUSG00000102522	TEC	Gm37782	ENSMUST00000194879	TEC		10	-1	76983901	678
ENSMUSG00000068740	protein_coding	Celsr2	ENSMUST00000090558	protein_coding	principal1	3	-1	108415552	10598
ENSMUSG00000101144	processed_transcript	Gm29054	ENSMUST00000194148	TEC		9	1	83145915	1450
ENSMUSG00000101144	processed_transcript	Gm29054	ENSMUST00000187589	antisense		9	1	83145946	1185
ENSMUSG00000050276	protein_coding	Mrgprg	ENSMUST00000058092	protein_coding	principal1	7	-1	143766993	1821
ENSMUSG00000102882	TEC	Gm2065	ENSMUST00000194697	TEC		9	1	83114108	2757
ENSMUSG00000068740	protein_coding	Celsr2	ENSMUST00000147251	protein_coding		3	-1	108398951	3486
ENSMUSG00000100605	lincRNA	Gm29243	ENSMUST00000188318	lincRNA		8	1	34216859	418
ENSMUSG00000029414	protein_coding	Kntc1	ENSMUST00000199838	retained_intron		5	1	123749716	347
ENSMUSG00000104080	TEC	Gm38279	ENSMUST00000194067	TEC		9	-1	83175777	1131
ENSMUSG00000068740	protein_coding	Celsr2	ENSMUST00000133216	processed_transcript		3	-1	108393433	467
ENSMUSG00000050276	protein_coding	Mrgprg	ENSMUST00000208986	protein_coding		7	-1	143765576	671
ENSMUSG00000041837	protein_coding	Pdcd7	ENSMUST00000048184	protein_coding	principal2	9	1	65346104	2419
ENSMUSG00000068740	protein_coding	Celsr2	ENSMUST00000126935	retained_intron		3	-1	108393524	831
ENSMUSG00000025722	protein_coding	Wdr73	ENSMUST00000026816	protein_coding	principal1	7	-1	80901269	2114
ENSMUSG00000068740	protein_coding	Celsr2	ENSMUST00000130941	retained_intron		3	-1	108394302	580
ENSMUSG00000109421	TEC	Gm44998	ENSMUST00000207091	TEC		7	-1	143775113	1768
ENSMUSG00000041837	protein_coding	Pdcd7	ENSMUST00000214433	protein_coding	alternative2	9	1	65346271	861
ENSMUSG00000068740	protein_coding	Celsr2	ENSMUST00000126349	retained_intron		3	-1	108396493	664
ENSMUSG00000041837	protein_coding	Pdcd7	ENSMUST00000215470	protein_coding		9	1	65346654	898
ENSMUSG00000068740	protein_coding	Celsr2	ENSMUST00000147565	retained_intron		3	-1	108402589	658
ENSMUSG00000024070	protein_coding	Prkd3	ENSMUST00000003191	protein_coding	principal3	17	-1	79013306	5517
ENSMUSG00000098747	lincRNA	Gm27216	ENSMUST00000184605	lincRNA		9	-1	83254022	599
ENSMUSG00000093755	protein_coding	Vmn1r39	ENSMUST00000226217	protein_coding	principal2	6	-1	66808971	2258
ENSMUSG00000078923	protein_coding	Ube2v1	ENSMUST00000109207	protein_coding	principal1	2	-1	167632095	2041
ENSMUSG00000098747	lincRNA	Gm27216	ENSMUST00000184100	lincRNA		9	-1	83254540	635
ENSMUSG00000039983	protein_coding	Ccdc32	ENSMUST00000036470	protein_coding	principal1	2	-1	119029393	1870
ENSMUSG00000093755	protein_coding	Vmn1r39	ENSMUST00000228919	protein_coding	alternative2	6	-1	66808971	2105
ENSMUSG00000098747	lincRNA	Gm27216	ENSMUST00000184080	lincRNA		9	-1	83254487	430
ENSMUSG00000048965	protein_coding	Mrgpre	ENSMUST00000054048	protein_coding	principal1	7	-1	143784500	3761
ENSMUSG00000039983	protein_coding	Ccdc32	ENSMUST00000110834	protein_coding		2	-1	119029393	828
ENSMUSG00000093755	protein_coding	Vmn1r39	ENSMUST00000228862	protein_coding	principal2	6	-1	66810497	2398
ENSMUSG00000039738	protein_coding	Slx4	ENSMUST00000146569	nonsense_mediated_decay		16	-1	3989106	4212
ENSMUSG00000078923	protein_coding	Ube2v1	ENSMUST00000060645	protein_coding		2	-1	167631972	1586
ENSMUSG00000111443	lincRNA	Gm46123	ENSMUST00000217447	lincRNA		9	1	83346159	6424
ENSMUSG00000030298	protein_coding	Sec13	ENSMUST00000032440	protein_coding	principal1	6	-1	113740743	1353
ENSMUSG00000039983	protein_coding	Ccdc32	ENSMUST00000110833	protein_coding		2	-1	119029377	732
ENSMUSG00000093755	protein_coding	Vmn1r39	ENSMUST00000227285	protein_coding	alternative2	6	-1	66810497	2245
ENSMUSG00000115124	lincRNA	Gm49201	ENSMUST00000227403	lincRNA		14	-1	34231728	1110
ENSMUSG00000111092	processed_pseudogene	Gm17875	ENSMUST00000216005	processed_pseudogene		9	1	65364887	941
ENSMUSG00000030298	protein_coding	Sec13	ENSMUST00000138204	retained_intron		6	-1	113735070	492
ENSMUSG00000078923	protein_coding	Ube2v1	ENSMUST00000151365	protein_coding		2	-1	167631987	924
ENSMUSG00000093755	protein_coding	Vmn1r39	ENSMUST00000228008	protein_coding	alternative2	6	-1	66810609	2283
ENSMUSG00000100042	processed_pseudogene	Gm29658	ENSMUST00000185404	processed_pseudogene		1	1	119874781	230
ENSMUSG00000030298	protein_coding	Sec13	ENSMUST00000145979	retained_intron		6	-1	113735070	460
ENSMUSG00000086228	protein_coding	Ubap1l	ENSMUST00000217103	processed_transcript		9	1	65361041	631
ENSMUSG00000030298	protein_coding	Sec13	ENSMUST00000205135	retained_intron		6	-1	113740727	1599
ENSMUSG00000093755	protein_coding	Vmn1r39	ENSMUST00000228651	protein_coding	alternative2	6	-1	66810609	2144
ENSMUSG00000078923	protein_coding	Ube2v1	ENSMUST00000130284	processed_transcript		2	-1	167631967	836
ENSMUSG00000100636	processed_pseudogene	Gm3551	ENSMUST00000190750	processed_pseudogene		1	1	119897461	664
ENSMUSG00000078923	protein_coding	Ube2v1	ENSMUST00000144628	retained_intron		2	-1	167610648	647
ENSMUSG00000093755	protein_coding	Vmn1r39	ENSMUST00000227555	protein_coding	principal2	6	-1	66810609	2297
ENSMUSG00000078923	protein_coding	Ube2v1	ENSMUST00000140216	protein_coding		2	-1	167631979	433
ENSMUSG00000101224	lincRNA	Gm28209	ENSMUST00000187956	lincRNA		1	1	119903130	775
ENSMUSG00000025646	protein_coding	Atrip	ENSMUST00000160217	nonsense_mediated_decay		9	-1	109074071	4248
ENSMUSG00000078923	protein_coding	Ube2v1	ENSMUST00000144830	retained_intron		2	-1	167631982	433
ENSMUSG00000104413	antisense	Gm37065	ENSMUST00000192498	antisense		1	-1	171919356	1622
ENSMUSG00000093755	protein_coding	Vmn1r39	ENSMUST00000226783	protein_coding	principal2	6	-1	66805332	918
ENSMUSG00000104413	antisense	Gm37065	ENSMUST00000192000	antisense		1	-1	171919324	568
ENSMUSG00000085914	antisense	Gm14320	ENSMUST00000137275	antisense		2	1	167662109	1023
ENSMUSG00000024070	protein_coding	Prkd3	ENSMUST00000119284	protein_coding	alternative1	17	-1	79020816	4743
ENSMUSG00000048626	protein_coding	Klf17	ENSMUST00000062747	protein_coding	principal1	4	-1	117765648	2400
ENSMUSG00000025646	protein_coding	Atrip	ENSMUST00000160928	retained_intron		9	-1	109074120	4215
ENSMUSG00000104413	antisense	Gm37065	ENSMUST00000191636	antisense		1	-1	171919308	444
ENSMUSG00000086228	protein_coding	Ubap1l	ENSMUST00000147185	protein_coding	principal1	9	1	65361061	1380
ENSMUSG00000025646	protein_coding	Atrip	ENSMUST00000128062	protein_coding		9	-1	109060338	626
ENSMUSG00000095202	processed_pseudogene	Gm6100	ENSMUST00000180253	processed_pseudogene		8	-1	34307687	403
ENSMUSG00000027324	protein_coding	Rpusd2	ENSMUST00000028796	protein_coding	principal1	2	1	119034790	2706
ENSMUSG00000098046	processed_pseudogene	Gm8254	ENSMUST00000182326	processed_pseudogene		8	-1	34322824	972
ENSMUSG00000086228	protein_coding	Ubap1l	ENSMUST00000215152	protein_coding		9	1	65368200	715
ENSMUSG00000024070	protein_coding	Prkd3	ENSMUST00000118768	protein_coding		17	-1	79008505	2847
ENSMUSG00000074919	lincRNA	Gm10787	ENSMUST00000099552	lincRNA		10	1	77011995	1548
ENSMUSG00000112773	lincRNA	Gm3137	ENSMUST00000218177	lincRNA		10	-1	77029575	620
ENSMUSG00000114093	lincRNA	Gm47979	ENSMUST00000221562	lincRNA		12	-1	66368385	196
ENSMUSG00000086228	protein_coding	Ubap1l	ENSMUST00000239433	protein_coding		9	1	65371846	846
ENSMUSG00000039738	protein_coding	Slx4	ENSMUST00000040790	protein_coding	principal1	16	-1	4001680	5706
ENSMUSG00000024070	protein_coding	Prkd3	ENSMUST00000124229	retained_intron		17	-1	78985448	3201
ENSMUSG00000024070	protein_coding	Prkd3	ENSMUST00000118991	protein_coding		17	-1	78985448	1265
ENSMUSG00000024070	protein_coding	Prkd3	ENSMUST00000146917	processed_transcript		17	-1	79008688	1214
ENSMUSG00000036975	protein_coding	Tmem177	ENSMUST00000037906	protein_coding	principal1	1	-1	119913208	3341
ENSMUSG00000025646	protein_coding	Atrip	ENSMUST00000045011	protein_coding	principal2	9	-1	109074124	2572
ENSMUSG00000054978	protein_coding	Kbtbd13	ENSMUST00000068307	protein_coding	principal1	9	-1	65391652	2969
ENSMUSG00000024070	protein_coding	Prkd3	ENSMUST00000130070	retained_intron		17	-1	79020777	3508
ENSMUSG00000039738	protein_coding	Slx4	ENSMUST00000156542	nonsense_mediated_decay		16	-1	3995718	5116
ENSMUSG00000024070	protein_coding	Prkd3	ENSMUST00000168887	protein_coding	principal3	17	-1	79020816	5884
ENSMUSG00000025646	protein_coding	Atrip	ENSMUST00000161521	protein_coding	alternative2	9	-1	109074052	2381
ENSMUSG00000039738	protein_coding	Slx4	ENSMUST00000128980	retained_intron		16	-1	3985519	2370
ENSMUSG00000039738	protein_coding	Slx4	ENSMUST00000145706	retained_intron		16	-1	3982204	1945
ENSMUSG00000025646	protein_coding	Atrip	ENSMUST00000161163	retained_intron		9	-1	109062289	1280
ENSMUSG00000039738	protein_coding	Slx4	ENSMUST00000165830	protein_coding		16	-1	4001252	865
ENSMUSG00000025722	protein_coding	Wdr73	ENSMUST00000139990	retained_intron		7	-1	80901232	2549
ENSMUSG00000103044	TEC	Gm37307	ENSMUST00000193663	TEC		9	1	83447559	2621
ENSMUSG00000025646	protein_coding	Atrip	ENSMUST00000159614	protein_coding	alternative2	9	-1	109065393	541
ENSMUSG00000039738	protein_coding	Slx4	ENSMUST00000171762	protein_coding		16	-1	4003770	715
ENSMUSG00000025646	protein_coding	Atrip	ENSMUST00000161270	retained_intron		9	-1	109069519	687
ENSMUSG00000025646	protein_coding	Atrip	ENSMUST00000194199	retained_intron		9	-1	109074066	2321
ENSMUSG00000039738	protein_coding	Slx4	ENSMUST00000171658	protein_coding		16	-1	4003752	673
ENSMUSG00000009647	protein_coding	Mcu	ENSMUST00000161168	processed_transcript		10	-1	59616679	1368
ENSMUSG00000025722	protein_coding	Wdr73	ENSMUST00000152518	retained_intron		7	-1	80901232	3142
ENSMUSG00000049734	protein_coding	Trex1	ENSMUST00000061973	protein_coding	principal1	9	-1	109059734	1084
ENSMUSG00000025722	protein_coding	Wdr73	ENSMUST00000135905	retained_intron		7	-1	80901234	3080
ENSMUSG00000009647	protein_coding	Mcu	ENSMUST00000161435	nonsense_mediated_decay		10	-1	59616675	2669
ENSMUSG00000091922	TEC	Gm17409	ENSMUST00000167423	TEC		2	1	58470116	962
ENSMUSG00000017667	protein_coding	Zfp334	ENSMUST00000103084	protein_coding	principal1	2	-1	165388259	8205
ENSMUSG00000049734	protein_coding	Trex1	ENSMUST00000112053	protein_coding	principal1	9	-1	109059251	1054
ENSMUSG00000025722	protein_coding	Wdr73	ENSMUST00000133979	processed_transcript		7	-1	80901219	785
ENSMUSG00000074849	protein_coding	Spata31d1c	ENSMUST00000099427	protein_coding	principal1	13	1	65033058	3390
ENSMUSG00000025722	protein_coding	Wdr73	ENSMUST00000146402	protein_coding		7	-1	80901220	719
ENSMUSG00000071713	protein_coding	Csf2rb	ENSMUST00000230264	protein_coding	principal2	15	1	78325752	4900
ENSMUSG00000098114	processed_pseudogene	Gm26957	ENSMUST00000182645	processed_pseudogene		17	1	79041946	977
ENSMUSG00000025722	protein_coding	Wdr73	ENSMUST00000131651	processed_transcript		7	-1	80900719	676
ENSMUSG00000041696	protein_coding	Rasl12	ENSMUST00000217172	nonsense_mediated_decay		9	1	65398506	2910
ENSMUSG00000025722	protein_coding	Wdr73	ENSMUST00000147589	processed_transcript		7	-1	80900504	425
ENSMUSG00000041696	protein_coding	Rasl12	ENSMUST00000215605	retained_intron		9	1	65398525	2408
ENSMUSG00000025722	protein_coding	Wdr73	ENSMUST00000147154	processed_transcript		7	-1	80901244	375
ENSMUSG00000025722	protein_coding	Wdr73	ENSMUST00000145923	processed_transcript		7	-1	80901232	376
ENSMUSG00000071713	protein_coding	Csf2rb	ENSMUST00000229920	retained_intron		15	1	78325798	2470
ENSMUSG00000009647	protein_coding	Mcu	ENSMUST00000009791	protein_coding		10	-1	59458160	1079
ENSMUSG00000087345	lincRNA	Gm13746	ENSMUST00000133981	lincRNA		2	1	71956053	605
ENSMUSG00000015314	protein_coding	Slamf6	ENSMUST00000195656	protein_coding	alternative2	1	1	171917515	5729
ENSMUSG00000009647	protein_coding	Mcu	ENSMUST00000162012	processed_transcript		10	-1	59616655	535
ENSMUSG00000090658	protein_coding	Prss47	ENSMUST00000220767	processed_transcript		13	-1	65052447	1193
ENSMUSG00000071713	protein_coding	Csf2rb	ENSMUST00000229034	protein_coding		15	1	78325990	397
ENSMUSG00000071713	protein_coding	Csf2rb	ENSMUST00000229678	protein_coding	alternative2	15	1	78326047	2083
ENSMUSG00000090658	protein_coding	Prss47	ENSMUST00000222769	protein_coding	alternative2	13	-1	65052497	1406
ENSMUSG00000015314	protein_coding	Slamf6	ENSMUST00000171330	protein_coding	principal3	1	1	171917537	2485
ENSMUSG00000090658	protein_coding	Prss47	ENSMUST00000203968	protein_coding	principal5	13	-1	65052760	1353
ENSMUSG00000091537	protein_coding	Tma7	ENSMUST00000192801	protein_coding		9	-1	109082378	386
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000236039	retained_intron		17	-1	32350575	3513
ENSMUSG00000015314	protein_coding	Slamf6	ENSMUST00000194924	retained_intron		1	1	171917682	998
ENSMUSG00000090658	protein_coding	Prss47	ENSMUST00000182457	protein_coding	alternative2	13	-1	65051847	828
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000236105	retained_intron		17	-1	32350577	4381
ENSMUSG00000015314	protein_coding	Slamf6	ENSMUST00000194561	protein_coding	alternative2	1	1	171917708	984
ENSMUSG00000009647	protein_coding	Mcu	ENSMUST00000020312	protein_coding	principal1	10	-1	59616692	2872
ENSMUSG00000041696	protein_coding	Rasl12	ENSMUST00000085453	protein_coding	principal1	9	1	65398525	2390
ENSMUSG00000071713	protein_coding	Csf2rb	ENSMUST00000231769	retained_intron		15	1	78326056	370
ENSMUSG00000015314	protein_coding	Slamf6	ENSMUST00000194182	protein_coding		1	1	171919492	346
ENSMUSG00000071713	protein_coding	Csf2rb	ENSMUST00000229657	processed_transcript		15	1	78326056	328
ENSMUSG00000071280	antisense	Gm10322	ENSMUST00000238281	antisense		10	1	59616064	1353
ENSMUSG00000041696	protein_coding	Rasl12	ENSMUST00000165682	protein_coding		9	1	65398534	1903
ENSMUSG00000015314	protein_coding	Slamf6	ENSMUST00000193311	retained_intron		1	1	171931557	2920
ENSMUSG00000071713	protein_coding	Csf2rb	ENSMUST00000231888	protein_coding		15	1	78326056	340
ENSMUSG00000071280	antisense	Gm10322	ENSMUST00000095646	antisense		10	1	59616063	336
ENSMUSG00000091537	protein_coding	Tma7	ENSMUST00000167504	protein_coding	principal1	9	-1	109082587	944
ENSMUSG00000015314	protein_coding	Slamf6	ENSMUST00000195206	processed_transcript		1	1	171942629	444
ENSMUSG00000036962	protein_coding	Cfap221	ENSMUST00000174370	protein_coding	principal1	1	-1	119997190	2871
ENSMUSG00000045232	protein_coding	Rln3	ENSMUST00000061923	protein_coding	principal1	8	-1	84045000	634
ENSMUSG00000056797	processed_pseudogene	Gm4889	ENSMUST00000075321	processed_pseudogene		8	1	34327910	444
ENSMUSG00000036962	protein_coding	Cfap221	ENSMUST00000174458	protein_coding		1	-1	119997234	637
ENSMUSG00000091537	protein_coding	Tma7	ENSMUST00000193868	processed_transcript		9	-1	109082378	380
ENSMUSG00000071713	protein_coding	Csf2rb	ENSMUST00000096355	protein_coding	principal2	15	1	78325990	4764
ENSMUSG00000107176	processed_pseudogene	Gm9794	ENSMUST00000202370	processed_pseudogene		6	-1	66875743	423
ENSMUSG00000091537	protein_coding	Tma7	ENSMUST00000192442	retained_intron		9	-1	109082365	203
ENSMUSG00000053862	protein_coding	Slc51b	ENSMUST00000065894	protein_coding	principal1	9	-1	65422955	709
ENSMUSG00000036962	protein_coding	Cfap221	ENSMUST00000037840	protein_coding	principal1	1	-1	119995210	2511
ENSMUSG00000113288	TEC	Gm47982	ENSMUST00000223245	TEC		12	-1	66458442	2340
ENSMUSG00000029414	protein_coding	Kntc1	ENSMUST00000031366	protein_coding	principal1	5	1	123749726	6961
ENSMUSG00000092245	processed_pseudogene	Gm17973	ENSMUST00000174509	processed_pseudogene		1	1	119986795	520
ENSMUSG00000109964	lincRNA	Gm45350	ENSMUST00000210560	lincRNA		8	-1	34362842	509
ENSMUSG00000089796	antisense	Gm16575	ENSMUST00000162186	antisense		15	1	79739574	1615
ENSMUSG00000029414	protein_coding	Kntc1	ENSMUST00000197665	processed_transcript		5	1	123772784	731
ENSMUSG00000029414	protein_coding	Kntc1	ENSMUST00000198841	protein_coding		5	1	123781188	483
ENSMUSG00000025645	protein_coding	Ccdc51	ENSMUST00000026735	protein_coding	principal1	9	1	109082493	1526
ENSMUSG00000032258	protein_coding	Lca5	ENSMUST00000190514	nonsense_mediated_decay		9	-1	83426961	2196
ENSMUSG00000029414	protein_coding	Kntc1	ENSMUST00000198716	retained_intron		5	1	123787212	544
ENSMUSG00000029414	protein_coding	Kntc1	ENSMUST00000197265	nonsense_mediated_decay		5	1	123811393	859
ENSMUSG00000109390	TEC	Gm45718	ENSMUST00000207577	TEC		7	-1	80914166	3794
ENSMUSG00000032258	protein_coding	Lca5	ENSMUST00000034793	protein_coding	alternative2	9	-1	83441127	2001
ENSMUSG00000025723	protein_coding	Nmb	ENSMUST00000146619	retained_intron		7	-1	80904393	537
ENSMUSG00000029414	protein_coding	Kntc1	ENSMUST00000197002	retained_intron		5	1	123819547	626
ENSMUSG00000032258	protein_coding	Lca5	ENSMUST00000034791	protein_coding	principal4	9	-1	83441027	4160
ENSMUSG00000025723	protein_coding	Nmb	ENSMUST00000026817	protein_coding	principal3	7	-1	80905076	705
ENSMUSG00000032258	protein_coding	Lca5	ENSMUST00000191225	retained_intron		9	-1	83401869	320
ENSMUSG00000025723	protein_coding	Nmb	ENSMUST00000149792	retained_intron		7	-1	80904374	506
ENSMUSG00000025723	protein_coding	Nmb	ENSMUST00000119428	protein_coding	alternative2	7	-1	80905060	678
ENSMUSG00000032258	protein_coding	Lca5	ENSMUST00000190373	retained_intron		9	-1	83441093	1728
ENSMUSG00000032258	protein_coding	Lca5	ENSMUST00000186802	protein_coding		9	-1	83434723	884
ENSMUSG00000032258	protein_coding	Lca5	ENSMUST00000190557	retained_intron		9	-1	83426969	502
ENSMUSG00000059183	protein_coding	Mtfmt	ENSMUST00000074792	protein_coding	principal1	9	1	65435782	2042
ENSMUSG00000024150	protein_coding	Mcfd2	ENSMUST00000024963	protein_coding	principal1	17	-1	87265935	2038
ENSMUSG00000042524	protein_coding	Sun2	ENSMUST00000162392	retained_intron		15	-1	79742456	4052
ENSMUSG00000025724	protein_coding	Sec11a	ENSMUST00000147813	processed_transcript		7	-1	80947545	480
ENSMUSG00000032258	protein_coding	Lca5	ENSMUST00000188548	protein_coding		9	-1	83441116	358
ENSMUSG00000032258	protein_coding	Lca5	ENSMUST00000188907	processed_transcript		9	-1	83441062	345
ENSMUSG00000086193	antisense	Gm11508	ENSMUST00000129337	antisense		11	-1	88048006	440
ENSMUSG00000099718	antisense	Gm2087	ENSMUST00000188217	antisense		9	1	83431547	366
ENSMUSG00000059183	protein_coding	Mtfmt	ENSMUST00000132966	retained_intron		9	1	65435788	2563
ENSMUSG00000024150	protein_coding	Mcfd2	ENSMUST00000144236	protein_coding	principal1	17	-1	87265904	2017
ENSMUSG00000058838	processed_pseudogene	Rps27a-ps2	ENSMUST00000078766	processed_pseudogene		9	1	83409660	467
ENSMUSG00000059183	protein_coding	Mtfmt	ENSMUST00000140244	processed_transcript		9	1	65437025	732
ENSMUSG00000059183	protein_coding	Mtfmt	ENSMUST00000130057	retained_intron		9	1	65443541	713
ENSMUSG00000099816	processed_pseudogene	Gm28552	ENSMUST00000190725	processed_pseudogene		9	1	83480032	388
ENSMUSG00000111722	lincRNA	Gm47270	ENSMUST00000214308	lincRNA		9	1	65453615	791
ENSMUSG00000100027	processed_pseudogene	Gm28477	ENSMUST00000188125	processed_pseudogene		9	1	83497666	406
ENSMUSG00000110197	TEC	Gm45444	ENSMUST00000211394	TEC		7	1	45814022	898
ENSMUSG00000024150	protein_coding	Mcfd2	ENSMUST00000129616	protein_coding	principal1	17	-1	87265880	813
ENSMUSG00000032119	protein_coding	Hinfp	ENSMUST00000216508	protein_coding	principal1	9	-1	44305671	5333
ENSMUSG00000025724	protein_coding	Sec11a	ENSMUST00000120285	protein_coding		7	-1	80947513	875
ENSMUSG00000024150	protein_coding	Mcfd2	ENSMUST00000151155	protein_coding		17	-1	87265895	603
ENSMUSG00000032119	protein_coding	Hinfp	ENSMUST00000215637	retained_intron		9	-1	44298040	741
ENSMUSG00000107634	antisense	Gm36816	ENSMUST00000205197	antisense		6	-1	67008413	504
ENSMUSG00000024150	protein_coding	Mcfd2	ENSMUST00000145895	protein_coding		17	-1	87265874	751
ENSMUSG00000025724	protein_coding	Sec11a	ENSMUST00000130981	retained_intron		7	-1	80923558	1044
ENSMUSG00000107634	antisense	Gm36816	ENSMUST00000204824	antisense		6	-1	67009260	493
ENSMUSG00000032119	protein_coding	Hinfp	ENSMUST00000034629	protein_coding		9	-1	44305646	1439
ENSMUSG00000025724	protein_coding	Sec11a	ENSMUST00000150049	processed_transcript		7	-1	80925650	759
ENSMUSG00000053442	processed_transcript	4930597O21Rik	ENSMUST00000203383	retained_intron		6	-1	66895456	805
ENSMUSG00000024150	protein_coding	Mcfd2	ENSMUST00000155904	protein_coding		17	-1	87265880	327
ENSMUSG00000053442	processed_transcript	4930597O21Rik	ENSMUST00000065878	bidirectional_promoter_lncRNA		6	-1	66896521	984
ENSMUSG00000024150	protein_coding	Mcfd2	ENSMUST00000139258	processed_transcript		17	-1	87265863	353
ENSMUSG00000084154	processed_pseudogene	Gm15644	ENSMUST00000121764	processed_pseudogene		6	1	67012485	387
ENSMUSG00000025724	protein_coding	Sec11a	ENSMUST00000026818	protein_coding	principal1	7	-1	80947780	1345
ENSMUSG00000032119	protein_coding	Hinfp	ENSMUST00000215665	processed_transcript		9	-1	44298636	508
ENSMUSG00000032119	protein_coding	Hinfp	ENSMUST00000217137	retained_intron		9	-1	44298870	887
ENSMUSG00000032119	protein_coding	Hinfp	ENSMUST00000217205	retained_intron		9	-1	44299458	551
ENSMUSG00000025724	protein_coding	Sec11a	ENSMUST00000153053	retained_intron		7	-1	80916330	495
ENSMUSG00000073486	antisense	Gm10518	ENSMUST00000097454	antisense		1	1	179803376	1301
ENSMUSG00000025724	protein_coding	Sec11a	ENSMUST00000117383	protein_coding		7	-1	80947780	1094
ENSMUSG00000032119	protein_coding	Hinfp	ENSMUST00000214660	protein_coding		9	-1	44305646	392
ENSMUSG00000018379	protein_coding	Srsf1	ENSMUST00000139129	protein_coding	principal1	11	1	88047373	5362
ENSMUSG00000032119	protein_coding	Hinfp	ENSMUST00000217605	retained_intron		9	-1	44305645	2468
ENSMUSG00000032261	protein_coding	Sh3bgrl2	ENSMUST00000188241	protein_coding		9	1	83548327	3155
ENSMUSG00000025724	protein_coding	Sec11a	ENSMUST00000147881	processed_transcript		7	-1	80947511	728
ENSMUSG00000025724	protein_coding	Sec11a	ENSMUST00000119980	protein_coding		7	-1	80947780	903
ENSMUSG00000032261	protein_coding	Sh3bgrl2	ENSMUST00000113215	protein_coding	principal1	9	1	83548328	4565
ENSMUSG00000111291	lincRNA	Gm48604	ENSMUST00000217413	lincRNA		9	-1	44292463	2420
ENSMUSG00000025724	protein_coding	Sec11a	ENSMUST00000136556	retained_intron		7	-1	80947742	2927
ENSMUSG00000032261	protein_coding	Sh3bgrl2	ENSMUST00000188617	retained_intron		9	1	83548329	683
ENSMUSG00000081372	processed_pseudogene	Gm16171	ENSMUST00000118004	processed_pseudogene		7	1	80907825	324
ENSMUSG00000032261	protein_coding	Sh3bgrl2	ENSMUST00000188030	protein_coding		9	1	83548350	2549
ENSMUSG00000032261	protein_coding	Sh3bgrl2	ENSMUST00000185664	processed_transcript		9	1	83576831	647
ENSMUSG00000018379	protein_coding	Srsf1	ENSMUST00000079866	protein_coding		11	1	88047718	2948
ENSMUSG00000110950	lincRNA	Gm39384	ENSMUST00000213703	lincRNA		9	-1	83573289	743
ENSMUSG00000018379	protein_coding	Srsf1	ENSMUST00000171976	retained_intron		11	1	88047725	645
ENSMUSG00000111820	lincRNA	Gm36120	ENSMUST00000214393	lincRNA		9	-1	83687525	1734
ENSMUSG00000018379	protein_coding	Srsf1	ENSMUST00000107920	protein_coding		11	1	88047803	1209
ENSMUSG00000100155	lincRNA	Gm2109	ENSMUST00000189326	lincRNA		9	1	83691475	1409
ENSMUSG00000018379	protein_coding	Srsf1	ENSMUST00000134824	nonsense_mediated_decay		11	1	88048567	896
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000151590	nonsense_mediated_decay		2	1	160731300	4388
ENSMUSG00000087236	protein_coding	Kif28	ENSMUST00000131716	protein_coding	alternative2	1	-1	179745271	3526
ENSMUSG00000018379	protein_coding	Srsf1	ENSMUST00000172186	nonsense_mediated_decay		11	1	88048589	401
ENSMUSG00000087236	protein_coding	Kif28	ENSMUST00000221136	protein_coding	principal5	1	-1	179745271	3538
ENSMUSG00000018379	protein_coding	Srsf1	ENSMUST00000132983	retained_intron		11	1	88049412	759
ENSMUSG00000087236	protein_coding	Kif28	ENSMUST00000211943	protein_coding	alternative2	1	-1	179745200	2643
ENSMUSG00000087236	protein_coding	Kif28	ENSMUST00000223392	protein_coding		1	-1	179700280	555
ENSMUSG00000028189	protein_coding	Ctbs	ENSMUST00000197166	retained_intron		3	1	146449795	3137
ENSMUSG00000032262	protein_coding	Elovl4	ENSMUST00000034796	protein_coding	principal1	9	-1	83806252	3001
ENSMUSG00000053646	protein_coding	Plxnb1	ENSMUST00000072093	protein_coding	principal1	9	1	109095389	8649
ENSMUSG00000036402	protein_coding	Gng12	ENSMUST00000043148	protein_coding	principal1	6	1	66896397	4248
ENSMUSG00000032262	protein_coding	Elovl4	ENSMUST00000183614	protein_coding		9	-1	83806277	782
ENSMUSG00000097286	bidirectional_promoter_lncRNA	Gm26684	ENSMUST00000228229	bidirectional_promoter_lncRNA		15	1	54952070	8257
ENSMUSG00000028189	protein_coding	Ctbs	ENSMUST00000061937	protein_coding	alternative2	3	1	146450470	2892
ENSMUSG00000097286	bidirectional_promoter_lncRNA	Gm26684	ENSMUST00000181704	bidirectional_promoter_lncRNA		15	1	54952948	1323
ENSMUSG00000053646	protein_coding	Plxnb1	ENSMUST00000131462	protein_coding		9	1	109095952	731
ENSMUSG00000028189	protein_coding	Ctbs	ENSMUST00000196609	nonsense_mediated_decay		3	1	146450478	691
ENSMUSG00000027180	protein_coding	Fbxo3	ENSMUST00000028603	protein_coding	principal4	2	1	104027721	4740
ENSMUSG00000053646	protein_coding	Plxnb1	ENSMUST00000130366	protein_coding		9	1	109096710	585
ENSMUSG00000036402	protein_coding	Gng12	ENSMUST00000114228	protein_coding	principal1	6	1	66896423	748
ENSMUSG00000053646	protein_coding	Plxnb1	ENSMUST00000192988	protein_coding		9	1	109104952	799
ENSMUSG00000028189	protein_coding	Ctbs	ENSMUST00000029840	protein_coding	principal3	3	1	146450493	2629
ENSMUSG00000036402	protein_coding	Gng12	ENSMUST00000114227	protein_coding	principal1	6	1	66896431	1125
ENSMUSG00000053646	protein_coding	Plxnb1	ENSMUST00000195364	retained_intron		9	1	109105501	651
ENSMUSG00000053646	protein_coding	Plxnb1	ENSMUST00000192117	retained_intron		9	1	109105963	737
ENSMUSG00000053646	protein_coding	Plxnb1	ENSMUST00000194734	retained_intron		9	1	109106794	729
ENSMUSG00000025644	antisense	Gm7628	ENSMUST00000134690	antisense		9	-1	109097796	2010
ENSMUSG00000036402	protein_coding	Gng12	ENSMUST00000114226	protein_coding	principal1	6	1	66896434	1155
ENSMUSG00000027180	protein_coding	Fbxo3	ENSMUST00000102565	protein_coding	alternative2	2	1	104027860	3720
ENSMUSG00000027180	protein_coding	Fbxo3	ENSMUST00000111135	protein_coding		2	1	104027844	3740
ENSMUSG00000036402	protein_coding	Gng12	ENSMUST00000204511	protein_coding		6	1	66896437	739
ENSMUSG00000028188	protein_coding	Spata1	ENSMUST00000200488	protein_coding		3	-1	146469739	566
ENSMUSG00000027180	protein_coding	Fbxo3	ENSMUST00000111136	protein_coding		2	1	104027846	4211
ENSMUSG00000027180	protein_coding	Fbxo3	ENSMUST00000143799	processed_transcript		2	1	104027848	2628
ENSMUSG00000036402	protein_coding	Gng12	ENSMUST00000114225	protein_coding	principal1	6	1	66896440	1876
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000103115	protein_coding		2	1	160731310	4435
ENSMUSG00000036402	protein_coding	Gng12	ENSMUST00000114224	protein_coding	principal1	6	1	66896456	680
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000174885	protein_coding		2	1	160731699	449
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000109462	protein_coding	principal1	2	1	160731733	5107
ENSMUSG00000036402	protein_coding	Gng12	ENSMUST00000114222	protein_coding	principal1	6	1	66896549	1354
ENSMUSG00000036402	protein_coding	Gng12	ENSMUST00000204862	protein_coding		6	1	66896891	380
ENSMUSG00000033819	protein_coding	Ppp1r16a	ENSMUST00000037551	protein_coding	principal1	15	1	76671615	2692
ENSMUSG00000038379	protein_coding	Ttk	ENSMUST00000188445	retained_intron		9	1	83834689	2711
ENSMUSG00000110178	lincRNA	Gm33831	ENSMUST00000211696	lincRNA		8	-1	34385828	1542
ENSMUSG00000033819	protein_coding	Ppp1r16a	ENSMUST00000135388	protein_coding	principal1	15	1	76671647	2827
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000017077	processed_transcript		2	1	160740987	4180
ENSMUSG00000033819	protein_coding	Ppp1r16a	ENSMUST00000138951	processed_transcript		15	1	76689181	499
ENSMUSG00000110369	lincRNA	Gm45349	ENSMUST00000210285	lincRNA		8	-1	34472995	1074
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000173791	retained_intron		2	1	160752487	2876
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000173335	retained_intron		2	1	160752552	2392
ENSMUSG00000028188	protein_coding	Spata1	ENSMUST00000197980	protein_coding	principal1	3	-1	146493845	1807
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000173061	retained_intron		2	1	160754067	643
ENSMUSG00000026491	protein_coding	Ahctf1	ENSMUST00000027768	protein_coding	principal1	1	-1	179803680	8506
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000129568	retained_intron		2	1	160754547	545
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000124652	processed_transcript		2	1	160754572	727
ENSMUSG00000026491	protein_coding	Ahctf1	ENSMUST00000140489	protein_coding		1	-1	179752409	1494
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000147254	retained_intron		2	1	160754906	721
ENSMUSG00000016933	protein_coding	Plcg1	ENSMUST00000143997	protein_coding		2	1	160760118	949
ENSMUSG00000028188	protein_coding	Spata1	ENSMUST00000029839	protein_coding	principal1	3	-1	146499753	1920
ENSMUSG00000026491	protein_coding	Ahctf1	ENSMUST00000151734	retained_intron		1	-1	179753580	2570
ENSMUSG00000026491	protein_coding	Ahctf1	ENSMUST00000125816	nonsense_mediated_decay		1	-1	179757989	769
ENSMUSG00000098889	antisense	Gm27206	ENSMUST00000154038	antisense		2	-1	160751909	979
ENSMUSG00000028188	protein_coding	Spata1	ENSMUST00000195949	protein_coding		3	-1	146476269	411
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000050214	protein_coding	principal2	17	-1	32350607	2102
ENSMUSG00000026491	protein_coding	Ahctf1	ENSMUST00000127250	nonsense_mediated_decay		1	-1	179765907	680
ENSMUSG00000026491	protein_coding	Ahctf1	ENSMUST00000145968	protein_coding		1	-1	179770918	530
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000236503	protein_coding	alternative2	17	-1	32350595	1987
ENSMUSG00000026491	protein_coding	Ahctf1	ENSMUST00000192645	retained_intron		1	-1	179796145	3156
ENSMUSG00000028188	protein_coding	Spata1	ENSMUST00000123421	processed_transcript		3	-1	146483525	742
ENSMUSG00000026491	protein_coding	Ahctf1	ENSMUST00000194536	retained_intron		1	-1	179802072	3232
ENSMUSG00000033819	protein_coding	Ppp1r16a	ENSMUST00000127674	retained_intron		15	1	76690407	2382
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000235724	processed_transcript		17	-1	32332899	545
ENSMUSG00000032698	protein_coding	Lmo2	ENSMUST00000111143	protein_coding		2	1	103970129	1654
ENSMUSG00000033819	protein_coding	Ppp1r16a	ENSMUST00000150399	nonsense_mediated_decay		15	1	76690529	1981
ENSMUSG00000026491	protein_coding	Ahctf1	ENSMUST00000147137	retained_intron		1	-1	179803606	746
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000237879	retained_intron		17	-1	32333481	1258
ENSMUSG00000047237	protein_coding	Fbxw21	ENSMUST00000054925	protein_coding	principal2	9	-1	109162041	1512
ENSMUSG00000028188	protein_coding	Spata1	ENSMUST00000197684	processed_transcript		3	-1	146499709	789
ENSMUSG00000033819	protein_coding	Ppp1r16a	ENSMUST00000143274	retained_intron		15	1	76691433	833
ENSMUSG00000028188	protein_coding	Spata1	ENSMUST00000093951	protein_coding		3	-1	146495115	2712
ENSMUSG00000033819	protein_coding	Ppp1r16a	ENSMUST00000156920	nonsense_mediated_decay		15	1	76691448	712
ENSMUSG00000047237	protein_coding	Fbxw21	ENSMUST00000198076	protein_coding	alternative2	9	-1	109162021	2242
ENSMUSG00000033819	protein_coding	Ppp1r16a	ENSMUST00000129396	retained_intron		15	1	76691691	716
ENSMUSG00000047237	protein_coding	Fbxw21	ENSMUST00000197401	processed_transcript		9	-1	109148118	795
ENSMUSG00000033819	protein_coding	Ppp1r16a	ENSMUST00000134449	retained_intron		15	1	76692808	1629
ENSMUSG00000047237	protein_coding	Fbxw21	ENSMUST00000199540	protein_coding		9	-1	109162020	383
ENSMUSG00000033819	protein_coding	Ppp1r16a	ENSMUST00000140730	retained_intron		15	1	76692917	1593
ENSMUSG00000117245	lincRNA	Gm49887	ENSMUST00000232883	lincRNA		17	1	56958320	637
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000026267	protein_coding	principal2	9	1	59617284	2709
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000235614	nonsense_mediated_decay		17	-1	32335579	916
ENSMUSG00000032698	protein_coding	Lmo2	ENSMUST00000111140	protein_coding		2	1	103970223	1706
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000236618	processed_transcript		17	-1	32334480	954
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000236494	retained_intron		17	-1	32333474	719
ENSMUSG00000082498	processed_pseudogene	Gm12937	ENSMUST00000118333	processed_pseudogene		4	-1	126796415	448
ENSMUSG00000032698	protein_coding	Lmo2	ENSMUST00000133210	processed_transcript		2	1	103971179	328
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000236765	protein_coding		17	-1	32336410	787
ENSMUSG00000032698	protein_coding	Lmo2	ENSMUST00000111139	protein_coding		2	1	103970244	1434
ENSMUSG00000045019	protein_coding	Acer1	ENSMUST00000056113	protein_coding	principal1	17	-1	56982126	2429
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000237936	nonsense_mediated_decay		17	-1	32336553	892
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000050483	protein_coding	alternative2	9	1	59617286	2631
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000235265	protein_coding		17	-1	32350506	452
ENSMUSG00000002625	protein_coding	Akap8l	ENSMUST00000235387	retained_intron		17	-1	32350589	800
ENSMUSG00000085284	antisense	Gm16189	ENSMUST00000123707	antisense		X	1	71439714	997
ENSMUSG00000032698	protein_coding	Lmo2	ENSMUST00000123437	protein_coding		2	1	103969528	848
ENSMUSG00000115183	processed_pseudogene	Gm49203	ENSMUST00000228310	processed_pseudogene		14	1	34263123	414
ENSMUSG00000032698	protein_coding	Lmo2	ENSMUST00000138815	protein_coding		2	1	103970141	478
ENSMUSG00000115214	processed_pseudogene	Gm49202	ENSMUST00000227194	processed_pseudogene		14	1	34280843	337
ENSMUSG00000032698	protein_coding	Lmo2	ENSMUST00000156813	protein_coding		2	1	103957986	710
ENSMUSG00000115649	processed_pseudogene	Gm18813	ENSMUST00000227225	processed_pseudogene		14	1	34260332	1352
ENSMUSG00000003269	protein_coding	Cyth2	ENSMUST00000107729	protein_coding	principal2	7	-1	45814311	2519
ENSMUSG00000003269	protein_coding	Cyth2	ENSMUST00000210137	nonsense_mediated_decay		7	-1	45813118	691
ENSMUSG00000032698	protein_coding	Lmo2	ENSMUST00000170926	protein_coding	principal1	2	1	103957995	1529
ENSMUSG00000003269	protein_coding	Cyth2	ENSMUST00000209245	nonsense_mediated_decay		7	-1	45814302	1512
ENSMUSG00000049314	protein_coding	Fbxw13	ENSMUST00000061456	protein_coding	principal1	9	-1	109195975	1485
ENSMUSG00000003269	protein_coding	Cyth2	ENSMUST00000210853	nonsense_mediated_decay		7	-1	45814282	1510
ENSMUSG00000049314	protein_coding	Fbxw13	ENSMUST00000199118	nonsense_mediated_decay		9	-1	109195962	1287
ENSMUSG00000003269	protein_coding	Cyth2	ENSMUST00000211783	protein_coding		7	-1	45813878	1983
ENSMUSG00000049314	protein_coding	Fbxw13	ENSMUST00000199102	protein_coding		9	-1	109195520	817
ENSMUSG00000003269	protein_coding	Cyth2	ENSMUST00000223361	protein_coding		7	-1	45810888	604
ENSMUSG00000003269	protein_coding	Cyth2	ENSMUST00000211263	protein_coding		7	-1	45814581	689
ENSMUSG00000003269	protein_coding	Cyth2	ENSMUST00000210898	protein_coding		7	-1	45814287	538
ENSMUSG00000031333	protein_coding	Abcb7	ENSMUST00000033695	protein_coding	principal1	X	-1	104413846	5667
ENSMUSG00000042978	protein_coding	Sbk1	ENSMUST00000239081	protein_coding		7	1	126248862	1512
ENSMUSG00000031333	protein_coding	Abcb7	ENSMUST00000140333	retained_intron		X	-1	104413856	593
ENSMUSG00000041471	protein_coding	Shld2	ENSMUST00000111917	protein_coding	principal1	14	-1	34310366	3317
ENSMUSG00000082996	processed_pseudogene	Gm6238	ENSMUST00000120999	processed_pseudogene		X	-1	104382506	465
ENSMUSG00000042978	protein_coding	Sbk1	ENSMUST00000056028	protein_coding	principal1	7	1	126272619	4109
ENSMUSG00000041471	protein_coding	Shld2	ENSMUST00000228704	protein_coding		14	-1	34310385	1023
ENSMUSG00000083327	processed_pseudogene	Vcp-rs	ENSMUST00000120233	processed_pseudogene		X	-1	104348234	2406
ENSMUSG00000003269	protein_coding	Cyth2	ENSMUST00000056820	protein_coding	alternative1	7	-1	45814316	2527
ENSMUSG00000042978	protein_coding	Sbk1	ENSMUST00000206424	protein_coding		7	1	126273400	193
ENSMUSG00000041471	protein_coding	Shld2	ENSMUST00000228626	protein_coding		14	-1	34287359	3100
ENSMUSG00000042978	protein_coding	Sbk1	ENSMUST00000206541	protein_coding		7	1	126291080	574
ENSMUSG00000041471	protein_coding	Shld2	ENSMUST00000227375	protein_coding		14	-1	34310493	774
ENSMUSG00000026836	protein_coding	Acvr1	ENSMUST00000112599	protein_coding	principal1	2	-1	58516272	2891
ENSMUSG00000084079	processed_pseudogene	Gm11631	ENSMUST00000119220	processed_pseudogene		11	1	98063888	156
ENSMUSG00000041471	protein_coding	Shld2	ENSMUST00000228337	protein_coding		14	-1	34297255	601
ENSMUSG00000026836	protein_coding	Acvr1	ENSMUST00000145495	processed_transcript		2	-1	58516272	2599
ENSMUSG00000041471	protein_coding	Shld2	ENSMUST00000227006	protein_coding		14	-1	34274259	397
ENSMUSG00000066180	processed_pseudogene	Gm10155	ENSMUST00000084598	processed_pseudogene		7	-1	126299916	483
ENSMUSG00000041471	protein_coding	Shld2	ENSMUST00000228132	processed_transcript		14	-1	34309465	514
ENSMUSG00000085287	processed_transcript	4833418N02Rik	ENSMUST00000137539	lincRNA		17	-1	87281693	1820
ENSMUSG00000085287	processed_transcript	4833418N02Rik	ENSMUST00000146560	lincRNA		17	-1	87282814	1495
ENSMUSG00000108417	lincRNA	Gm30928	ENSMUST00000206881	lincRNA		7	-1	126351597	271
ENSMUSG00000085287	processed_transcript	4833418N02Rik	ENSMUST00000160917	lincRNA		17	-1	87282500	651
ENSMUSG00000087056	processed_transcript	Gm14004	ENSMUST00000138875	processed_transcript		2	-1	125134327	590
ENSMUSG00000108417	lincRNA	Gm30928	ENSMUST00000205858	lincRNA		7	-1	126351619	459
ENSMUSG00000085287	processed_transcript	4833418N02Rik	ENSMUST00000161759	bidirectional_promoter_lncRNA		17	-1	87282779	1370
ENSMUSG00000111343	TEC	Gm47175	ENSMUST00000216940	TEC		9	-1	56506661	1837
ENSMUSG00000110821	lincRNA	Gm47176	ENSMUST00000213911	lincRNA		9	1	56539905	328
ENSMUSG00000111201	processed_pseudogene	Gm47178	ENSMUST00000216151	processed_pseudogene		9	1	56543756	342
ENSMUSG00000061701	protein_coding	Fbxw20	ENSMUST00000079548	protein_coding	principal1	9	-1	109234754	1511
ENSMUSG00000097870	lincRNA	Gm26868	ENSMUST00000181927	lincRNA		9	1	56606693	2655
ENSMUSG00000116890	sense_intronic	Gm49617	ENSMUST00000232065	sense_intronic		16	1	93888734	366
ENSMUSG00000061701	protein_coding	Fbxw20	ENSMUST00000198261	retained_intron		9	-1	109234733	2244
ENSMUSG00000061701	protein_coding	Fbxw20	ENSMUST00000197329	protein_coding		9	-1	109234724	840
ENSMUSG00000057359	processed_transcript	Gm17494	ENSMUST00000072769	antisense		3	-1	122293547	1800
ENSMUSG00000057359	processed_transcript	Gm17494	ENSMUST00000199060	retained_intron		3	-1	122293720	6844
ENSMUSG00000104574	antisense	Gm42836	ENSMUST00000197198	antisense		3	-1	122459060	728
ENSMUSG00000093392	transcribed_processed_pseudogene	Gm6061	ENSMUST00000175860	transcribed_processed_pseudogene		3	1	122256728	492
ENSMUSG00000073016	protein_coding	Uprt	ENSMUST00000087867	protein_coding	principal1	X	1	104482818	2304
ENSMUSG00000026836	protein_coding	Acvr1	ENSMUST00000090935	protein_coding	principal1	2	-1	58566826	3293
ENSMUSG00000027412	protein_coding	Lpin3	ENSMUST00000109456	protein_coding	principal2	2	1	160880670	3470
ENSMUSG00000027412	protein_coding	Lpin3	ENSMUST00000109455	protein_coding	alternative2	2	1	160888108	3365
ENSMUSG00000031706	protein_coding	Rfx1	ENSMUST00000211046	protein_coding	alternative2	8	1	84066834	3677
ENSMUSG00000027412	protein_coding	Lpin3	ENSMUST00000040872	protein_coding	principal2	2	1	160888108	3458
ENSMUSG00000106758	TEC	Gm42731	ENSMUST00000201839	TEC		5	-1	135473419	1641
ENSMUSG00000026836	protein_coding	Acvr1	ENSMUST00000056376	protein_coding	principal1	2	-1	58567157	2394
ENSMUSG00000027412	protein_coding	Lpin3	ENSMUST00000109457	protein_coding	alternative2	2	1	160888171	3215
ENSMUSG00000031706	protein_coding	Rfx1	ENSMUST00000209362	retained_intron		8	1	84066836	1892
ENSMUSG00000027412	protein_coding	Lpin3	ENSMUST00000124920	processed_transcript		2	1	160901549	520
ENSMUSG00000031706	protein_coding	Rfx1	ENSMUST00000210660	retained_intron		8	1	84066836	2820
ENSMUSG00000026836	protein_coding	Acvr1	ENSMUST00000126407	protein_coding		2	-1	58538438	612
ENSMUSG00000031706	protein_coding	Rfx1	ENSMUST00000005600	protein_coding	principal2	8	1	84066836	4172
ENSMUSG00000081854	processed_pseudogene	Gm11447	ENSMUST00000118983	processed_pseudogene		2	1	160845613	858
ENSMUSG00000056753	antisense	C330011M18Rik	ENSMUST00000071067	antisense		8	-1	84067287	1849
ENSMUSG00000026836	protein_coding	Acvr1	ENSMUST00000112601	protein_coding	principal1	2	-1	58566828	3050
ENSMUSG00000085303	antisense	Gm16751	ENSMUST00000142212	antisense		2	-1	160888028	1685
ENSMUSG00000083507	processed_pseudogene	Gm12842	ENSMUST00000117298	processed_pseudogene		4	-1	117825656	476
ENSMUSG00000033906	protein_coding	Zdhhc15	ENSMUST00000042070	protein_coding	principal1	X	-1	104671064	5509
ENSMUSG00000022945	protein_coding	Chaf1b	ENSMUST00000023666	protein_coding	principal1	16	1	93883901	1922
ENSMUSG00000080994	processed_pseudogene	Gm13464	ENSMUST00000119418	processed_pseudogene		2	-1	43519398	935
ENSMUSG00000114021	lincRNA	Gm47109	ENSMUST00000221371	lincRNA		12	-1	98993009	621
ENSMUSG00000022945	protein_coding	Chaf1b	ENSMUST00000117099	protein_coding	principal1	16	1	93883924	1894
ENSMUSG00000114021	lincRNA	Gm47109	ENSMUST00000222313	lincRNA		12	-1	98993009	569
ENSMUSG00000114021	lincRNA	Gm47109	ENSMUST00000221939	lincRNA		12	-1	98993009	449
ENSMUSG00000035877	protein_coding	Zhx3	ENSMUST00000133937	processed_transcript		2	-1	160872998	3532
ENSMUSG00000083049	processed_pseudogene	Gm14822	ENSMUST00000122247	processed_pseudogene		X	1	104746482	291
ENSMUSG00000022945	protein_coding	Chaf1b	ENSMUST00000124313	retained_intron		16	1	93883931	2828
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000216351	nonsense_mediated_decay		9	1	59617361	2484
ENSMUSG00000022945	protein_coding	Chaf1b	ENSMUST00000142316	protein_coding		16	1	93884016	719
ENSMUSG00000100364	lincRNA	1700121L16Rik	ENSMUST00000189166	lincRNA		X	1	104816776	561
ENSMUSG00000035877	protein_coding	Zhx3	ENSMUST00000103111	protein_coding	principal1	2	-1	160872572	9563
ENSMUSG00000022945	protein_coding	Chaf1b	ENSMUST00000120586	protein_coding		16	1	93884202	484
ENSMUSG00000114089	lincRNA	Gm47116	ENSMUST00000220675	lincRNA		12	-1	99063458	400
ENSMUSG00000035877	protein_coding	Zhx3	ENSMUST00000103112	protein_coding	principal1	2	-1	160859631	9109
ENSMUSG00000022945	protein_coding	Chaf1b	ENSMUST00000143006	nonsense_mediated_decay		16	1	93892741	428
ENSMUSG00000062582	processed_pseudogene	Rpl30-ps8	ENSMUST00000076166	processed_pseudogene		12	1	99047230	345
ENSMUSG00000022945	protein_coding	Chaf1b	ENSMUST00000128316	retained_intron		16	1	93904693	611
ENSMUSG00000031224	protein_coding	Magee2	ENSMUST00000033575	protein_coding	principal1	X	-1	104857267	2316
ENSMUSG00000053208	processed_pseudogene	Kat2b-ps	ENSMUST00000128468	processed_pseudogene		5	-1	93393091	2490
ENSMUSG00000081703	processed_pseudogene	Gm6285	ENSMUST00000122012	processed_pseudogene		X	1	104947785	498
ENSMUSG00000035877	protein_coding	Zhx3	ENSMUST00000176141	protein_coding		2	-1	160872829	637
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000217195	retained_intron		9	1	59617362	1340
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000215381	retained_intron		9	1	59617377	816
ENSMUSG00000113210	lincRNA	4930474N09Rik	ENSMUST00000223511	lincRNA		12	-1	99162808	1176
ENSMUSG00000035877	protein_coding	Zhx3	ENSMUST00000127201	protein_coding		2	-1	160872990	761
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000214984	retained_intron		9	1	59617380	657
ENSMUSG00000082600	processed_pseudogene	Gm9673	ENSMUST00000119287	processed_pseudogene		X	1	105032586	781
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000087258	protein_coding	principal3	X	-1	150657583	6559
ENSMUSG00000035877	protein_coding	Zhx3	ENSMUST00000109460	protein_coding	principal1	2	-1	160872990	4480
ENSMUSG00000107356	unprocessed_pseudogene	Gm18118	ENSMUST00000201064	unprocessed_pseudogene		5	1	93410762	645
ENSMUSG00000028124	protein_coding	Gclm	ENSMUST00000029769	protein_coding	principal1	3	1	122245557	5589
ENSMUSG00000106699	unprocessed_pseudogene	Gm43224	ENSMUST00000201567	unprocessed_pseudogene		5	1	93421672	898
ENSMUSG00000006462	lincRNA	A530013C23Rik	ENSMUST00000141923	lincRNA		2	1	167691177	3489
ENSMUSG00000028124	protein_coding	Gclm	ENSMUST00000137540	processed_transcript		3	1	122245712	762
ENSMUSG00000028124	protein_coding	Gclm	ENSMUST00000199699	protein_coding		3	1	122245988	292
ENSMUSG00000006462	lincRNA	A530013C23Rik	ENSMUST00000130679	lincRNA		2	1	167691181	2555
ENSMUSG00000036944	protein_coding	Tmem71	ENSMUST00000048372	protein_coding	principal1	15	-1	66561103	2988
ENSMUSG00000028124	protein_coding	Gclm	ENSMUST00000176445	protein_coding		3	1	122246081	877
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000167091	nonsense_mediated_decay		9	1	59618672	2232
ENSMUSG00000028124	protein_coding	Gclm	ENSMUST00000149983	protein_coding		3	1	122255587	1088
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000213419	retained_intron		9	1	59621556	3934
ENSMUSG00000028124	protein_coding	Gclm	ENSMUST00000176761	retained_intron		3	1	122261779	495
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000216385	processed_transcript		9	1	59625320	645
ENSMUSG00000028124	protein_coding	Gclm	ENSMUST00000178826	protein_coding	principal1	3	1	122245668	1002
ENSMUSG00000104888	TEC	1500005C15Rik	ENSMUST00000199867	TEC		3	-1	127717027	2394
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000216482	retained_intron		9	1	59630623	2247
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000214956	protein_coding		9	1	59637631	514
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000151403	protein_coding	alternative2	X	-1	150657399	2715
ENSMUSG00000089988	processed_pseudogene	Gm16238	ENSMUST00000159343	processed_pseudogene		3	-1	127692520	586
ENSMUSG00000025237	protein_coding	Parp6	ENSMUST00000217284	retained_intron		9	1	59648197	791
ENSMUSG00000105701	TEC	Gm42587	ENSMUST00000198462	TEC		3	-1	127719186	1981
ENSMUSG00000028121	protein_coding	Bcar3	ENSMUST00000196134	retained_intron		3	1	122294136	1531
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000087253	protein_coding	alternative2	X	-1	150657399	3224
ENSMUSG00000028121	protein_coding	Bcar3	ENSMUST00000200544	retained_intron		3	1	122419757	849
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000163969	protein_coding	alternative2	X	-1	150657436	2644
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000139759	protein_coding		4	1	137993022	1590
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000164071	protein_coding	alternative2	X	-1	150655928	891
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000169450	retained_intron		X	-1	150651671	684
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000163450	nonsense_mediated_decay		X	-1	150657399	888
ENSMUSG00000028028	protein_coding	Alpk1	ENSMUST00000198955	protein_coding	principal1	3	-1	127729571	4498
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000171775	retained_intron		X	-1	150651720	832
ENSMUSG00000038379	protein_coding	Ttk	ENSMUST00000185913	protein_coding		9	1	83834690	2731
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000165192	retained_intron		X	-1	150652847	427
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000148604	protein_coding		X	-1	150657372	1822
ENSMUSG00000025272	protein_coding	Tro	ENSMUST00000112709	protein_coding	principal3	X	-1	150657436	6610
ENSMUSG00000028028	protein_coding	Alpk1	ENSMUST00000160586	retained_intron		3	-1	127780527	6448
ENSMUSG00000028028	protein_coding	Alpk1	ENSMUST00000159720	protein_coding		3	-1	127686340	550
ENSMUSG00000049556	protein_coding	Lingo1	ENSMUST00000210032	protein_coding	principal3	9	-1	56796138	3627
ENSMUSG00000028028	protein_coding	Alpk1	ENSMUST00000161239	retained_intron		3	-1	127780513	829
ENSMUSG00000028028	protein_coding	Alpk1	ENSMUST00000162859	processed_transcript		3	-1	127780490	322
ENSMUSG00000028028	protein_coding	Alpk1	ENSMUST00000029662	protein_coding	principal1	3	-1	127780527	4795
ENSMUSG00000038379	protein_coding	Ttk	ENSMUST00000070326	protein_coding	principal1	9	1	83834718	2871
ENSMUSG00000049556	protein_coding	Lingo1	ENSMUST00000114256	protein_coding	alternative1	9	-1	56635628	2782
ENSMUSG00000038379	protein_coding	Ttk	ENSMUST00000189727	retained_intron		9	1	83834734	1791
ENSMUSG00000085973	lincRNA	Gm14742	ENSMUST00000148284	lincRNA		X	-1	77803280	381
ENSMUSG00000038379	protein_coding	Ttk	ENSMUST00000186277	processed_transcript		9	1	83834741	999
ENSMUSG00000049556	protein_coding	Lingo1	ENSMUST00000114247	protein_coding	principal3	9	-1	56647660	2287
ENSMUSG00000054087	protein_coding	Fbxw28	ENSMUST00000112040	protein_coding	alternative2	9	-1	109339659	1678
ENSMUSG00000103379	processed_pseudogene	Gm37177	ENSMUST00000193768	processed_pseudogene		1	1	182071403	417
ENSMUSG00000049556	protein_coding	Lingo1	ENSMUST00000209596	processed_transcript		9	-1	56796298	777
ENSMUSG00000054087	protein_coding	Fbxw28	ENSMUST00000112039	protein_coding	principal4	9	-1	109339659	1497
ENSMUSG00000049556	protein_coding	Lingo1	ENSMUST00000210332	processed_transcript		9	-1	56796206	474
ENSMUSG00000038379	protein_coding	Ttk	ENSMUST00000191484	protein_coding		9	1	83834766	600
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000058133	protein_coding		4	1	137993022	2663
ENSMUSG00000049556	protein_coding	Lingo1	ENSMUST00000209332	processed_transcript		9	-1	56796468	700
ENSMUSG00000049556	protein_coding	Lingo1	ENSMUST00000210995	processed_transcript		9	-1	56769123	265
ENSMUSG00000054087	protein_coding	Fbxw28	ENSMUST00000200156	protein_coding	alternative2	9	-1	109339654	1330
ENSMUSG00000050394	protein_coding	Armcx6	ENSMUST00000052431	protein_coding	principal1	X	-1	134751417	2024
ENSMUSG00000049556	protein_coding	Lingo1	ENSMUST00000053568	protein_coding	principal3	9	-1	56685253	3295
ENSMUSG00000054087	protein_coding	Fbxw28	ENSMUST00000196351	protein_coding		9	-1	109339642	663
ENSMUSG00000111769	lincRNA	Gm36278	ENSMUST00000217030	lincRNA		9	-1	83925022	918
ENSMUSG00000086761	antisense	Cep112os1	ENSMUST00000137907	antisense		11	-1	108533664	3005
ENSMUSG00000050394	protein_coding	Armcx6	ENSMUST00000126075	processed_transcript		X	-1	134751361	445
ENSMUSG00000050394	protein_coding	Armcx6	ENSMUST00000150465	processed_transcript		X	-1	134751347	743
ENSMUSG00000081016	unprocessed_pseudogene	Olfr1397-ps1	ENSMUST00000121388	unprocessed_pseudogene		11	-1	108688035	962
ENSMUSG00000050394	protein_coding	Armcx6	ENSMUST00000113194	protein_coding	principal1	X	-1	134751331	2120
ENSMUSG00000084797	lincRNA	Gm14321	ENSMUST00000139927	lincRNA		2	1	167777467	351
ENSMUSG00000084797	lincRNA	Gm14321	ENSMUST00000127441	lincRNA		2	1	167777536	632
ENSMUSG00000087624	lincRNA	9230111E07Rik	ENSMUST00000124850	lincRNA		2	1	167782053	811
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000105830	protein_coding		4	1	137993022	3252
ENSMUSG00000105589	protein_coding	Fbxw14	ENSMUST00000198048	protein_coding		9	-1	109276126	659
ENSMUSG00000028121	protein_coding	Bcar3	ENSMUST00000029766	protein_coding	principal1	3	1	122419778	3311
ENSMUSG00000028121	protein_coding	Bcar3	ENSMUST00000197590	processed_transcript		3	1	122419823	766
ENSMUSG00000028121	protein_coding	Bcar3	ENSMUST00000197073	protein_coding		3	1	122483723	722
ENSMUSG00000028121	protein_coding	Bcar3	ENSMUST00000199358	protein_coding		3	1	122504675	705
ENSMUSG00000101077	processed_pseudogene	Gm29164	ENSMUST00000185454	processed_pseudogene		9	-1	83967007	1024
ENSMUSG00000028121	protein_coding	Bcar3	ENSMUST00000197956	retained_intron		3	1	122508064	1011
ENSMUSG00000028121	protein_coding	Bcar3	ENSMUST00000198659	protein_coding		3	1	122511129	781
ENSMUSG00000028121	protein_coding	Bcar3	ENSMUST00000199344	protein_coding		3	1	122512222	855
ENSMUSG00000028121	protein_coding	Bcar3	ENSMUST00000197959	retained_intron		3	1	122524646	509
ENSMUSG00000000003	protein_coding	Pbsn	ENSMUST00000000003	protein_coding	principal1	X	-1	77853623	902
ENSMUSG00000000003	protein_coding	Pbsn	ENSMUST00000114041	protein_coding		X	-1	77853530	697
ENSMUSG00000039756	protein_coding	Dnttip2	ENSMUST00000035776	protein_coding	principal1	3	1	122274388	2429
ENSMUSG00000005981	protein_coding	Trap1	ENSMUST00000006137	protein_coding	principal1	16	-1	4077827	2320
ENSMUSG00000089755	antisense	0610012D04Rik	ENSMUST00000159031	antisense		17	-1	87364462	531
ENSMUSG00000039756	protein_coding	Dnttip2	ENSMUST00000197215	processed_transcript		3	1	122274418	911
ENSMUSG00000105589	protein_coding	Fbxw14	ENSMUST00000198844	protein_coding	principal3	9	-1	109287676	1786
ENSMUSG00000005981	protein_coding	Trap1	ENSMUST00000137945	processed_transcript		16	-1	4044698	449
ENSMUSG00000039756	protein_coding	Dnttip2	ENSMUST00000199449	processed_transcript		3	1	122276017	600
ENSMUSG00000005981	protein_coding	Trap1	ENSMUST00000150354	nonsense_mediated_decay		16	-1	4077775	431
ENSMUSG00000105589	protein_coding	Fbxw14	ENSMUST00000112041	protein_coding	alternative2	9	-1	109287671	1332
ENSMUSG00000039756	protein_coding	Dnttip2	ENSMUST00000199627	retained_intron		3	1	122276773	906
ENSMUSG00000005981	protein_coding	Trap1	ENSMUST00000138594	retained_intron		16	-1	4077827	621
ENSMUSG00000039756	protein_coding	Dnttip2	ENSMUST00000196338	retained_intron		3	1	122280577	564
ENSMUSG00000105589	protein_coding	Fbxw14	ENSMUST00000198928	protein_coding		9	-1	109287082	583
ENSMUSG00000084790	antisense	Gm15879	ENSMUST00000150906	antisense		16	-1	4037519	565
ENSMUSG00000084790	antisense	Gm15879	ENSMUST00000139334	antisense		16	-1	4037847	809
ENSMUSG00000104554	antisense	Gm4610	ENSMUST00000198222	antisense		3	-1	122391811	905
ENSMUSG00000049047	protein_coding	Armcx3	ENSMUST00000081834	protein_coding	principal1	X	1	134756595	3327
ENSMUSG00000116301	processed_pseudogene	Gm49547	ENSMUST00000230558	processed_pseudogene		16	1	4067343	217
ENSMUSG00000105057	lincRNA	Gm40190	ENSMUST00000196570	lincRNA		3	1	122293439	471
ENSMUSG00000049047	protein_coding	Armcx3	ENSMUST00000086880	protein_coding	principal1	X	1	134756607	2024
ENSMUSG00000049047	protein_coding	Armcx3	ENSMUST00000086884	protein_coding	principal1	X	1	134756647	3488
ENSMUSG00000105447	antisense	Gm43653	ENSMUST00000198136	antisense		3	1	127836911	1608
ENSMUSG00000032263	protein_coding	Bckdhb	ENSMUST00000190637	protein_coding	alternative2	9	1	83925145	1477
ENSMUSG00000042524	protein_coding	Sun2	ENSMUST00000089311	protein_coding	principal3	15	-1	79742534	3709
ENSMUSG00000032263	protein_coding	Bckdhb	ENSMUST00000190166	protein_coding	principal3	9	1	83948781	1398
ENSMUSG00000042524	protein_coding	Sun2	ENSMUST00000231189	retained_intron		15	-1	79742361	4413
ENSMUSG00000046688	protein_coding	Tifa	ENSMUST00000054483	protein_coding	principal1	3	1	127789805	2245
ENSMUSG00000070324	protein_coding	Fbxw22	ENSMUST00000080626	protein_coding	principal1	9	-1	109404296	1835
ENSMUSG00000046688	protein_coding	Tifa	ENSMUST00000166778	processed_transcript		3	1	127789910	452
ENSMUSG00000070324	protein_coding	Fbxw22	ENSMUST00000197213	nonsense_mediated_decay		9	-1	109404296	1208
ENSMUSG00000046688	protein_coding	Tifa	ENSMUST00000163775	protein_coding	principal1	3	1	127789912	1646
ENSMUSG00000046688	protein_coding	Tifa	ENSMUST00000164447	protein_coding	principal1	3	1	127790655	1538
ENSMUSG00000042524	protein_coding	Sun2	ENSMUST00000100439	protein_coding	alternative2	15	-1	79742504	3768
ENSMUSG00000046688	protein_coding	Tifa	ENSMUST00000171621	protein_coding	principal1	3	1	127790804	2547
ENSMUSG00000032263	protein_coding	Bckdhb	ENSMUST00000189819	processed_transcript		9	1	84035840	504
ENSMUSG00000032263	protein_coding	Bckdhb	ENSMUST00000188200	processed_transcript		9	1	84045887	540
ENSMUSG00000042524	protein_coding	Sun2	ENSMUST00000046259	protein_coding	alternative2	15	-1	79742536	3804
ENSMUSG00000032263	protein_coding	Bckdhb	ENSMUST00000186136	processed_transcript		9	1	84107507	542
ENSMUSG00000105804	TEC	Gm43654	ENSMUST00000200664	TEC		3	-1	127832971	3417
ENSMUSG00000032263	protein_coding	Bckdhb	ENSMUST00000034801	protein_coding	principal3	9	1	83925150	1472
ENSMUSG00000035776	protein_coding	Cd99l2	ENSMUST00000037391	protein_coding	alternative2	X	-1	71492849	3600
ENSMUSG00000042524	protein_coding	Sun2	ENSMUST00000159762	retained_intron		15	-1	79742504	1783
ENSMUSG00000111757	antisense	Gm46124	ENSMUST00000217260	antisense		9	-1	84024817	860
ENSMUSG00000042524	protein_coding	Sun2	ENSMUST00000162064	retained_intron		15	-1	79735951	234
ENSMUSG00000111757	antisense	Gm46124	ENSMUST00000215223	antisense		9	-1	84024817	808
ENSMUSG00000035776	protein_coding	Cd99l2	ENSMUST00000114586	protein_coding	alternative2	X	-1	71492849	3459
ENSMUSG00000042524	protein_coding	Sun2	ENSMUST00000159660	protein_coding		15	-1	79742115	476
ENSMUSG00000035776	protein_coding	Cd99l2	ENSMUST00000148177	processed_transcript		X	-1	71492605	196
ENSMUSG00000035776	protein_coding	Cd99l2	ENSMUST00000114587	protein_coding	alternative2	X	-1	71492849	973
ENSMUSG00000042524	protein_coding	Sun2	ENSMUST00000162499	protein_coding		15	-1	79742103	355
ENSMUSG00000111616	processed_pseudogene	Gm18487	ENSMUST00000215826	processed_pseudogene		9	-1	84386555	878
ENSMUSG00000106134	antisense	Gm42493	ENSMUST00000197559	antisense		9	1	109448645	1121
ENSMUSG00000042524	protein_coding	Sun2	ENSMUST00000160355	protein_coding		15	-1	79742092	348
ENSMUSG00000074238	protein_coding	Ap1ar	ENSMUST00000200409	protein_coding		3	-1	127837523	2580
ENSMUSG00000035776	protein_coding	Cd99l2	ENSMUST00000128515	retained_intron		X	-1	71492649	1609
ENSMUSG00000037509	protein_coding	Arhgef4	ENSMUST00000159747	protein_coding	alternative2	1	1	34678188	6514
ENSMUSG00000099927	processed_pseudogene	Gm8226	ENSMUST00000190511	processed_pseudogene		9	1	84423984	798
ENSMUSG00000035776	protein_coding	Cd99l2	ENSMUST00000080035	protein_coding	principal3	X	-1	71492645	3327
ENSMUSG00000074238	protein_coding	Ap1ar	ENSMUST00000051737	protein_coding	principal1	3	-1	127837511	2662
ENSMUSG00000027628	protein_coding	Aar2	ENSMUST00000109570	protein_coding	principal1	2	1	156547584	2766
ENSMUSG00000037509	protein_coding	Arhgef4	ENSMUST00000162599	protein_coding		1	1	34732115	1887
ENSMUSG00000111245	lincRNA	Gm39388	ENSMUST00000214502	lincRNA		9	1	84577960	1041
ENSMUSG00000074238	protein_coding	Ap1ar	ENSMUST00000198626	retained_intron		3	-1	127808864	1598
ENSMUSG00000037509	protein_coding	Arhgef4	ENSMUST00000159021	protein_coding		1	1	34750581	1206
ENSMUSG00000074238	protein_coding	Ap1ar	ENSMUST00000197450	retained_intron		3	-1	127812687	446
ENSMUSG00000111770	processed_pseudogene	Gm48811	ENSMUST00000215561	processed_pseudogene		9	-1	84677002	427
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000137748	protein_coding		16	1	4036942	988
ENSMUSG00000027628	protein_coding	Aar2	ENSMUST00000029158	protein_coding	principal1	2	1	156547596	3427
ENSMUSG00000074238	protein_coding	Ap1ar	ENSMUST00000199901	retained_intron		3	-1	127817618	761
ENSMUSG00000074238	protein_coding	Ap1ar	ENSMUST00000197744	retained_intron		3	-1	127817307	440
ENSMUSG00000074062	protein_coding	Fbxw16	ENSMUST00000084984	protein_coding	principal1	9	-1	109449124	1497
ENSMUSG00000039959	protein_coding	Hip1	ENSMUST00000060311	protein_coding	principal1	5	-1	135545115	7835
ENSMUSG00000099724	lincRNA	4930554C24Rik	ENSMUST00000187735	lincRNA		9	1	84774398	1084
ENSMUSG00000074238	protein_coding	Ap1ar	ENSMUST00000196687	retained_intron		3	-1	127825498	5166
ENSMUSG00000099724	lincRNA	4930554C24Rik	ENSMUST00000217202	lincRNA		9	1	84774407	895
ENSMUSG00000027628	protein_coding	Aar2	ENSMUST00000137928	processed_transcript		2	1	156547608	451
ENSMUSG00000074062	protein_coding	Fbxw16	ENSMUST00000196410	retained_intron		9	-1	109449140	1796
ENSMUSG00000099724	lincRNA	4930554C24Rik	ENSMUST00000216802	lincRNA		9	1	84774512	1346
ENSMUSG00000074238	protein_coding	Ap1ar	ENSMUST00000200238	retained_intron		3	-1	127837231	198
ENSMUSG00000027628	protein_coding	Aar2	ENSMUST00000150212	protein_coding		2	1	156547610	867
ENSMUSG00000039959	protein_coding	Hip1	ENSMUST00000202643	protein_coding		5	-1	135435148	6224
ENSMUSG00000074238	protein_coding	Ap1ar	ENSMUST00000197471	retained_intron		3	-1	127822633	1886
ENSMUSG00000099724	lincRNA	4930554C24Rik	ENSMUST00000216019	lincRNA		9	1	84851283	1159
ENSMUSG00000105162	TEC	Gm42494	ENSMUST00000196515	TEC		9	1	109440128	3051
ENSMUSG00000027628	protein_coding	Aar2	ENSMUST00000126250	protein_coding		2	1	156547624	536
ENSMUSG00000074238	protein_coding	Ap1ar	ENSMUST00000196392	nonsense_mediated_decay		3	-1	127837256	218
ENSMUSG00000039959	protein_coding	Hip1	ENSMUST00000201479	retained_intron		5	-1	135430094	1180
ENSMUSG00000111500	lincRNA	Gm48820	ENSMUST00000213542	lincRNA		9	1	84858707	1027
ENSMUSG00000039959	protein_coding	Hip1	ENSMUST00000200808	nonsense_mediated_decay		5	-1	135440324	760
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000165095	protein_coding	principal1	15	-1	83432815	3186
ENSMUSG00000102064	lincRNA	Gm28625	ENSMUST00000188309	lincRNA		9	1	84890545	205
ENSMUSG00000063556	processed_pseudogene	Gm10132	ENSMUST00000099431	processed_pseudogene		14	-1	77252314	468
ENSMUSG00000037509	protein_coding	Arhgef4	ENSMUST00000047664	protein_coding	principal2	1	1	34801704	3287
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000231184	protein_coding	principal1	15	-1	83432824	3103
ENSMUSG00000110783	lincRNA	Gm48821	ENSMUST00000213260	lincRNA		9	-1	84924633	386
ENSMUSG00000067973	antisense	Gm6994	ENSMUST00000088880	antisense		14	-1	77506868	1163
ENSMUSG00000074061	protein_coding	Fbxw19	ENSMUST00000197191	retained_intron		9	-1	109478817	2164
ENSMUSG00000067973	antisense	Gm6994	ENSMUST00000163416	antisense		14	-1	77501440	432
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000230679	protein_coding	principal1	15	-1	83464570	3083
ENSMUSG00000115244	antisense	Gm49002	ENSMUST00000226498	antisense		14	-1	77440976	1845
ENSMUSG00000099779	processed_pseudogene	Gm8228	ENSMUST00000189949	processed_pseudogene		9	-1	84976515	2192
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000006136	protein_coding	principal1	16	1	4036970	1480
ENSMUSG00000037509	protein_coding	Arhgef4	ENSMUST00000162760	retained_intron		1	1	34801721	2981
ENSMUSG00000039959	protein_coding	Hip1	ENSMUST00000200898	retained_intron		5	-1	135545120	3253
ENSMUSG00000086914	antisense	Gm16124	ENSMUST00000146938	antisense		9	1	53667246	516
ENSMUSG00000037509	protein_coding	Arhgef4	ENSMUST00000159059	retained_intron		1	1	34801722	1024
ENSMUSG00000079522	protein_coding	Gm14744	ENSMUST00000114039	protein_coding	principal1	X	1	77864758	800
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000231946	protein_coding		15	-1	83385091	823
ENSMUSG00000039959	protein_coding	Hip1	ENSMUST00000212301	protein_coding		5	-1	135465927	1625
ENSMUSG00000101673	processed_pseudogene	Gm28070	ENSMUST00000191502	processed_pseudogene		9	1	85104765	445
ENSMUSG00000037509	protein_coding	Arhgef4	ENSMUST00000160855	nonsense_mediated_decay		1	1	34801741	2339
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000157044	protein_coding		16	1	4036973	598
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000230030	protein_coding		15	-1	83388602	857
ENSMUSG00000039959	protein_coding	Hip1	ENSMUST00000202236	processed_transcript		5	-1	135452518	773
ENSMUSG00000111281	lincRNA	Gm48830	ENSMUST00000216158	lincRNA		9	-1	85234582	493
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000231043	processed_transcript		15	-1	83385789	635
ENSMUSG00000104358	TEC	Gm37127	ENSMUST00000192924	TEC		1	1	34823525	3036
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000230960	retained_intron		15	-1	83386808	639
ENSMUSG00000118272	protein_coding	Arhgef4	ENSMUST00000211073	protein_coding	principal1	1	1	34801794	171
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000120009	protein_coding	principal1	16	1	4037031	1286
ENSMUSG00000039959	protein_coding	Hip1	ENSMUST00000201998	protein_coding		5	-1	135489258	738
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000230816	protein_coding		15	-1	83423790	765
ENSMUSG00000111822	lincRNA	Gm48831	ENSMUST00000213613	lincRNA		9	-1	85240041	487
ENSMUSG00000074061	protein_coding	Fbxw19	ENSMUST00000076617	protein_coding	principal1	9	-1	109495875	1483
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000162581	protein_coding	alternative2	13	-1	49148012	6628
ENSMUSG00000102612	processed_pseudogene	Gm37845	ENSMUST00000194977	processed_pseudogene		1	1	34753123	355
ENSMUSG00000039959	protein_coding	Hip1	ENSMUST00000202095	retained_intron		5	-1	135458205	719
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000229337	protein_coding		15	-1	83464552	640
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000144792	retained_intron		16	1	4037098	2782
ENSMUSG00000039959	protein_coding	Hip1	ENSMUST00000202044	retained_intron		5	-1	135545115	1569
ENSMUSG00000104002	antisense	Gm38336	ENSMUST00000193040	antisense		1	-1	34811908	2549
ENSMUSG00000044121	protein_coding	5430402E10Rik	ENSMUST00000063127	protein_coding	principal1	X	-1	77925062	798
ENSMUSG00000081093	processed_pseudogene	Gm12565	ENSMUST00000119004	processed_pseudogene		3	-1	37600072	649
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000125961	retained_intron		16	1	4037101	1311
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000056177	protein_coding	principal1	15	-1	83464570	2795
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000177337	nonsense_mediated_decay		16	1	4037155	917
ENSMUSG00000082635	unprocessed_pseudogene	Gm14750	ENSMUST00000118262	unprocessed_pseudogene		X	1	77988363	516
ENSMUSG00000104572	transcribed_unprocessed_pseudogene	Fbxw23	ENSMUST00000198480	transcribed_unprocessed_pseudogene		9	-1	109534044	1388
ENSMUSG00000104572	transcribed_unprocessed_pseudogene	Fbxw23	ENSMUST00000198015	processed_transcript		9	-1	109534858	425
ENSMUSG00000016664	protein_coding	Pacsin2	ENSMUST00000171436	protein_coding	principal1	15	-1	83464606	3693
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000149670	retained_intron		16	1	4037276	726
ENSMUSG00000032265	protein_coding	Tent5a	ENSMUST00000034802	protein_coding	principal3	9	-1	85327124	5479
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000176642	retained_intron		16	1	4037304	844
ENSMUSG00000049414	processed_pseudogene	Gm5417	ENSMUST00000079706	processed_pseudogene		15	-1	83406063	438
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000132466	retained_intron		16	1	4038222	405
ENSMUSG00000032265	protein_coding	Tent5a	ENSMUST00000187711	protein_coding	alternative2	9	-1	85327348	5648
ENSMUSG00000005980	protein_coding	Dnase1	ENSMUST00000175755	protein_coding		16	1	4039130	368
ENSMUSG00000103018	processed_pseudogene	Gm17968	ENSMUST00000194902	processed_pseudogene		1	-1	182128189	784
ENSMUSG00000103368	TEC	Gm36927	ENSMUST00000192504	TEC		9	-1	85344351	1841
ENSMUSG00000036918	protein_coding	Ttc7	ENSMUST00000041110	protein_coding	principal1	17	1	87282886	4614
ENSMUSG00000111840	lincRNA	Gm48832	ENSMUST00000214276	lincRNA		9	-1	85348065	3309
ENSMUSG00000111840	lincRNA	Gm48832	ENSMUST00000214073	lincRNA		9	-1	85348064	3333
ENSMUSG00000026511	protein_coding	Srp9	ENSMUST00000111018	protein_coding		1	1	182124737	823
ENSMUSG00000036918	protein_coding	Ttc7	ENSMUST00000126497	processed_transcript		17	1	87282893	637
ENSMUSG00000111663	lincRNA	Gm48833	ENSMUST00000216235	lincRNA		9	-1	85419158	520
ENSMUSG00000036918	protein_coding	Ttc7	ENSMUST00000125875	protein_coding		17	1	87282905	3917
ENSMUSG00000104674	antisense	Gm42756	ENSMUST00000196601	antisense		9	1	109537100	2614
ENSMUSG00000036918	protein_coding	Ttc7	ENSMUST00000234468	processed_transcript		17	1	87282948	868
ENSMUSG00000110956	lincRNA	Gm48834	ENSMUST00000216435	lincRNA		9	-1	85553765	320
ENSMUSG00000026511	protein_coding	Srp9	ENSMUST00000027792	protein_coding	principal1	1	1	182124750	1367
ENSMUSG00000111386	lincRNA	Gm48842	ENSMUST00000213802	lincRNA		9	-1	85639567	322
ENSMUSG00000026511	protein_coding	Srp9	ENSMUST00000191799	retained_intron		1	1	182124781	3719
ENSMUSG00000026511	protein_coding	Srp9	ENSMUST00000193005	retained_intron		1	1	182130699	1107
ENSMUSG00000081781	processed_pseudogene	Gm14753	ENSMUST00000118503	processed_pseudogene		X	-1	78021287	246
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000162403	protein_coding	alternative2	13	-1	49147232	6147
ENSMUSG00000066510	protein_coding	Ankdd1a	ENSMUST00000217144	retained_intron		9	-1	65502655	1214
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000102607	protein_coding	principal4	4	1	126753770	4191
ENSMUSG00000091013	protein_coding	Vmn1r1	ENSMUST00000227629	protein_coding	principal1	1	-1	182164486	3654
ENSMUSG00000091013	protein_coding	Vmn1r1	ENSMUST00000227586	protein_coding	principal1	1	-1	182164486	3766
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000102608	protein_coding	principal4	4	1	126753555	4073
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000159559	protein_coding	alternative2	13	-1	49147232	6584
ENSMUSG00000091013	protein_coding	Vmn1r1	ENSMUST00000169123	protein_coding	principal1	1	-1	182158098	921
ENSMUSG00000036918	protein_coding	Ttc7	ENSMUST00000144204	nonsense_mediated_decay		17	1	87282951	2209
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000159196	protein_coding		13	-1	49060883	3392
ENSMUSG00000066510	protein_coding	Ankdd1a	ENSMUST00000217646	protein_coding	principal5	9	-1	65520193	1526
ENSMUSG00000080890	unprocessed_pseudogene	Gm16458	ENSMUST00000121428	unprocessed_pseudogene		X	1	78059390	502
ENSMUSG00000036918	protein_coding	Ttc7	ENSMUST00000154255	nonsense_mediated_decay		17	1	87292811	2304
ENSMUSG00000066510	protein_coding	Ankdd1a	ENSMUST00000061766	protein_coding	alternative2	9	-1	65516999	1443
ENSMUSG00000074060	protein_coding	Fbxw15	ENSMUST00000056745	protein_coding	principal2	9	-1	109568262	1495
ENSMUSG00000036918	protein_coding	Ttc7	ENSMUST00000127970	processed_transcript		17	1	87309332	670
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000047431	protein_coding	alternative2	4	1	126753770	4384
ENSMUSG00000027488	protein_coding	Snta1	ENSMUST00000109728	protein_coding	principal2	2	-1	154408099	2131
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000160087	protein_coding		13	-1	49078063	4360
ENSMUSG00000036918	protein_coding	Ttc7	ENSMUST00000153014	retained_intron		17	1	87323068	349
ENSMUSG00000074060	protein_coding	Fbxw15	ENSMUST00000198397	protein_coding	alternative2	9	-1	109568250	927
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000136035	processed_transcript		4	1	126753826	455
ENSMUSG00000036918	protein_coding	Ttc7	ENSMUST00000148554	processed_transcript		17	1	87330214	219
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000159633	nonsense_mediated_decay		13	-1	49071015	682
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000154640	protein_coding		4	1	126753553	616
ENSMUSG00000074060	protein_coding	Fbxw15	ENSMUST00000198112	protein_coding		9	-1	109568248	770
ENSMUSG00000036918	protein_coding	Ttc7	ENSMUST00000148126	processed_transcript		17	1	87378853	2028
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000110097	protein_coding	alternative2	13	-1	49148014	6882
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000148935	protein_coding		4	1	126753544	350
ENSMUSG00000105948	processed_pseudogene	Gm43089	ENSMUST00000199162	processed_pseudogene		9	-1	109542913	275
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000132660	protein_coding		4	1	126753794	356
ENSMUSG00000089701	antisense	Gm15978	ENSMUST00000161043	antisense		17	-1	87332052	738
ENSMUSG00000106495	TEC	Gm42755	ENSMUST00000198533	TEC		9	-1	109574224	1493
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000131900	processed_transcript		4	1	126753814	406
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000091623	protein_coding	principal4	13	-1	49148014	6897
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000125225	processed_transcript		4	1	126850517	530
ENSMUSG00000087684	lincRNA	1200007C13Rik	ENSMUST00000143649	lincRNA		2	-1	167833646	2455
ENSMUSG00000027488	protein_coding	Snta1	ENSMUST00000028991	protein_coding	alternative2	2	-1	154408081	2125
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000049265	protein_coding	alternative2	13	-1	49148014	6738
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000155341	processed_transcript		4	1	126835279	827
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000110096	protein_coding	alternative2	13	-1	49148014	6534
ENSMUSG00000027488	protein_coding	Snta1	ENSMUST00000133018	processed_transcript		2	-1	154407980	1438
ENSMUSG00000028830	protein_coding	AU040320	ENSMUST00000141918	processed_transcript		4	1	126816263	500
ENSMUSG00000067684	protein_coding	Obp1a	ENSMUST00000088201	protein_coding	principal1	X	-1	78091374	757
ENSMUSG00000022425	protein_coding	Enpp2	ENSMUST00000041591	protein_coding	principal3	15	-1	54920002	3095
ENSMUSG00000032030	protein_coding	Cul5	ENSMUST00000120122	protein_coding		9	-1	53670014	5945
ENSMUSG00000037989	protein_coding	Wnk2	ENSMUST00000035538	protein_coding	alternative2	13	-1	49148014	6630
ENSMUSG00000032030	protein_coding	Cul5	ENSMUST00000141803	retained_intron		9	-1	53622034	1712
ENSMUSG00000118355	processed_pseudogene	Gm38616	ENSMUST00000237441	processed_pseudogene		19	1	32423192	385
ENSMUSG00000022425	protein_coding	Enpp2	ENSMUST00000173516	protein_coding		15	-1	54920018	2887
ENSMUSG00000109580	processed_pseudogene	Gm8268	ENSMUST00000209683	processed_pseudogene		8	1	34507207	458
ENSMUSG00000118329	processed_pseudogene	Gm9563	ENSMUST00000235317	processed_pseudogene		19	-1	32441024	1084
ENSMUSG00000103715	TEC	4933431K14Rik	ENSMUST00000195799	TEC		9	1	85749078	1352
ENSMUSG00000110015	lincRNA	Gm33968	ENSMUST00000211015	lincRNA		8	1	34523318	1562
ENSMUSG00000038633	protein_coding	Degs1	ENSMUST00000035295	protein_coding	principal1	1	-1	182282804	2048
ENSMUSG00000022425	protein_coding	Enpp2	ENSMUST00000167541	protein_coding	alternative1	15	-1	54919961	2664
ENSMUSG00000038633	protein_coding	Degs1	ENSMUST00000132551	retained_intron		1	-1	182282804	1405
ENSMUSG00000062275	protein_coding	Fbxw24	ENSMUST00000073962	protein_coding	principal1	9	-1	109626057	1488
ENSMUSG00000038633	protein_coding	Degs1	ENSMUST00000133052	protein_coding		1	-1	182282224	779
ENSMUSG00000022425	protein_coding	Enpp2	ENSMUST00000171545	protein_coding	alternative1	15	-1	54919961	2745
ENSMUSG00000062456	protein_coding	Rpl9-ps6	ENSMUST00000078034	protein_coding	principal1	19	-1	32466578	714
ENSMUSG00000022425	protein_coding	Enpp2	ENSMUST00000228823	retained_intron		15	-1	54862686	486
ENSMUSG00000032030	protein_coding	Cul5	ENSMUST00000034529	protein_coding	principal1	9	-1	53667511	3585
ENSMUSG00000100147	lincRNA	1700047M11Rik	ENSMUST00000189594	lincRNA		1	1	182287990	2607
ENSMUSG00000100147	lincRNA	1700047M11Rik	ENSMUST00000185216	lincRNA		1	1	182300834	684
ENSMUSG00000109819	lincRNA	B930018H19Rik	ENSMUST00000211381	lincRNA		8	-1	34640316	2121
ENSMUSG00000032030	protein_coding	Cul5	ENSMUST00000141180	retained_intron		9	-1	53646812	2400
ENSMUSG00000109880	lincRNA	Gm34096	ENSMUST00000211296	lincRNA		8	1	34608305	530
ENSMUSG00000022425	protein_coding	Enpp2	ENSMUST00000227483	retained_intron		15	-1	54920125	2977
ENSMUSG00000032030	protein_coding	Cul5	ENSMUST00000123499	retained_intron		9	-1	53667487	1589
ENSMUSG00000022425	protein_coding	Enpp2	ENSMUST00000228222	protein_coding		15	-1	54922613	728
ENSMUSG00000094992	protein_coding	Fbxw25	ENSMUST00000163839	protein_coding	principal1	9	-1	109664652	1490
ENSMUSG00000032030	protein_coding	Cul5	ENSMUST00000146405	retained_intron		9	-1	53646908	559
ENSMUSG00000022425	protein_coding	Enpp2	ENSMUST00000227057	processed_transcript		15	-1	54914718	525
ENSMUSG00000032030	protein_coding	Cul5	ENSMUST00000137922	processed_transcript		9	-1	53658681	458
ENSMUSG00000030742	protein_coding	Lat	ENSMUST00000206793	protein_coding	alternative2	7	-1	126369541	1215
ENSMUSG00000022425	protein_coding	Enpp2	ENSMUST00000226339	protein_coding		15	-1	54952892	482
ENSMUSG00000032030	protein_coding	Cul5	ENSMUST00000133872	nonsense_mediated_decay		9	-1	53667072	392
ENSMUSG00000037503	protein_coding	Fam168b	ENSMUST00000047534	protein_coding	principal1	1	-1	34843065	5030
ENSMUSG00000079521	protein_coding	Gm5938	ENSMUST00000114030	protein_coding	principal1	X	1	78125467	775
ENSMUSG00000032030	protein_coding	Cul5	ENSMUST00000166367	protein_coding		9	-1	53667507	5942
ENSMUSG00000079521	protein_coding	Gm5938	ENSMUST00000126279	retained_intron		X	1	78126832	640
ENSMUSG00000038212	protein_coding	Mfsd14b	ENSMUST00000155487	protein_coding	principal1	13	-1	65112975	3832
ENSMUSG00000024896	protein_coding	Minpp1	ENSMUST00000025827	protein_coding	principal1	19	1	32485769	2613
ENSMUSG00000031393	protein_coding	Mecp2	ENSMUST00000100750	protein_coding	alternative2	X	-1	74085669	10538
ENSMUSG00000024896	protein_coding	Minpp1	ENSMUST00000236287	retained_intron		19	1	32485923	896
ENSMUSG00000032388	protein_coding	Spg21	ENSMUST00000034955	protein_coding	principal1	9	1	65460947	2680
ENSMUSG00000105008	TEC	Gm43652	ENSMUST00000196219	TEC		3	-1	127863858	675
ENSMUSG00000118106	TEC	AC115752.1	ENSMUST00000235511	TEC		19	1	32485923	2276
ENSMUSG00000032388	protein_coding	Spg21	ENSMUST00000213957	protein_coding		9	1	65460953	1302
ENSMUSG00000037503	protein_coding	Fam168b	ENSMUST00000170092	protein_coding		1	-1	34842964	941
ENSMUSG00000105550	lincRNA	Gm35585	ENSMUST00000195996	lincRNA		3	1	127861599	1570
ENSMUSG00000038212	protein_coding	Mfsd14b	ENSMUST00000054730	protein_coding	principal1	13	-1	65112974	3251
ENSMUSG00000030742	protein_coding	Lat	ENSMUST00000032997	protein_coding	principal2	7	-1	126369534	1235
ENSMUSG00000109846	lincRNA	Gm45627	ENSMUST00000210130	lincRNA		8	-1	34659369	977
ENSMUSG00000032388	protein_coding	Spg21	ENSMUST00000215170	protein_coding		9	1	65462850	484
ENSMUSG00000037503	protein_coding	Fam168b	ENSMUST00000185469	nonsense_mediated_decay		1	-1	34842985	778
ENSMUSG00000032388	protein_coding	Spg21	ENSMUST00000216992	retained_intron		9	1	65468789	795
ENSMUSG00000118168	lincRNA	Gm36419	ENSMUST00000237957	lincRNA		19	1	32543348	1649
ENSMUSG00000038212	protein_coding	Mfsd14b	ENSMUST00000148779	retained_intron		13	-1	65069827	613
ENSMUSG00000030742	protein_coding	Lat	ENSMUST00000205426	retained_intron		7	-1	126364886	634
ENSMUSG00000067679	protein_coding	Obp1b	ENSMUST00000088198	protein_coding	principal1	X	1	78186777	797
ENSMUSG00000027670	protein_coding	Ocstamp	ENSMUST00000029213	protein_coding	principal1	2	-1	165400405	3657
ENSMUSG00000037503	protein_coding	Fam168b	ENSMUST00000191307	protein_coding		1	-1	34843034	844
ENSMUSG00000038212	protein_coding	Mfsd14b	ENSMUST00000220824	retained_intron		13	-1	65112958	1973
ENSMUSG00000111818	processed_transcript	Gm17749	ENSMUST00000216282	processed_transcript		9	-1	65529806	690
ENSMUSG00000030742	protein_coding	Lat	ENSMUST00000205398	retained_intron		7	-1	126369570	2053
ENSMUSG00000031393	protein_coding	Mecp2	ENSMUST00000033770	protein_coding	principal4	X	-1	74085690	1739
ENSMUSG00000030742	protein_coding	Lat	ENSMUST00000205642	protein_coding		7	-1	126369494	559
ENSMUSG00000037503	protein_coding	Fam168b	ENSMUST00000185279	processed_transcript		1	-1	34843013	487
ENSMUSG00000081396	processed_pseudogene	Gm15132	ENSMUST00000118581	processed_pseudogene		X	1	150688145	652
ENSMUSG00000037503	protein_coding	Fam168b	ENSMUST00000185231	protein_coding		1	-1	34843004	464
ENSMUSG00000030742	protein_coding	Lat	ENSMUST00000206731	retained_intron		7	-1	126369340	401
ENSMUSG00000082961	processed_pseudogene	Gm15131	ENSMUST00000119124	processed_pseudogene		X	-1	150707615	595
ENSMUSG00000037503	protein_coding	Fam168b	ENSMUST00000140534	retained_intron		1	-1	34843065	525
ENSMUSG00000031393	protein_coding	Mecp2	ENSMUST00000123362	protein_coding		X	-1	74085612	1675
ENSMUSG00000031393	protein_coding	Mecp2	ENSMUST00000140399	protein_coding		X	-1	74085610	1168
ENSMUSG00000074059	protein_coding	Fbxw18	ENSMUST00000098359	protein_coding	principal1	9	-1	109702700	1519
ENSMUSG00000031393	protein_coding	Mecp2	ENSMUST00000198358	retained_intron		X	-1	74085597	4563
ENSMUSG00000037503	protein_coding	Fam168b	ENSMUST00000167518	protein_coding		1	-1	34843050	5058
ENSMUSG00000042446	protein_coding	Zmym4	ENSMUST00000106108	protein_coding	principal1	4	-1	126968135	7102
ENSMUSG00000104567	TEC	Gm43209	ENSMUST00000198949	TEC		9	1	109702934	1588
ENSMUSG00000079444	protein_coding	Gm21981	ENSMUST00000143789	nonsense_mediated_decay	principal1	17	-1	47694455	2721
ENSMUSG00000031393	protein_coding	Mecp2	ENSMUST00000170481	protein_coding	alternative2	X	-1	74135363	10175
ENSMUSG00000102537	processed_pseudogene	Gm37224	ENSMUST00000192878	processed_pseudogene		1	1	34752775	148
ENSMUSG00000042446	protein_coding	Zmym4	ENSMUST00000135003	protein_coding		4	-1	126923148	5799
ENSMUSG00000042446	protein_coding	Zmym4	ENSMUST00000123597	processed_transcript		4	-1	126967923	711
ENSMUSG00000042446	protein_coding	Zmym4	ENSMUST00000154821	processed_transcript		4	-1	126967899	548
ENSMUSG00000056772	processed_pseudogene	Rps6-ps2	ENSMUST00000079841	processed_pseudogene		8	1	88806391	747
ENSMUSG00000042446	protein_coding	Zmym4	ENSMUST00000129028	processed_transcript		4	-1	126925561	522
ENSMUSG00000042446	protein_coding	Zmym4	ENSMUST00000151026	processed_transcript		4	-1	126923196	598
ENSMUSG00000042446	protein_coding	Zmym4	ENSMUST00000152489	processed_transcript		4	-1	126915118	742
ENSMUSG00000023266	protein_coding	Frs3	ENSMUST00000156118	protein_coding		17	1	47689030	344
ENSMUSG00000042446	protein_coding	Zmym4	ENSMUST00000152952	processed_transcript		4	-1	126915230	1087
ENSMUSG00000096044	protein_coding	Gm16427	ENSMUST00000201432	protein_coding	principal5	5	-1	93493701	2042
ENSMUSG00000042446	protein_coding	Zmym4	ENSMUST00000150467	processed_transcript		4	-1	126870473	594
ENSMUSG00000096044	protein_coding	Gm16427	ENSMUST00000200745	protein_coding	principal5	5	-1	93540200	1749
ENSMUSG00000050721	protein_coding	Plekho2	ENSMUST00000214740	processed_transcript		9	-1	65579034	5046
ENSMUSG00000096044	protein_coding	Gm16427	ENSMUST00000179091	protein_coding	alternative2	5	-1	93485346	1449
ENSMUSG00000023266	protein_coding	Frs3	ENSMUST00000113296	protein_coding	principal1	17	1	47695198	2144
ENSMUSG00000050721	protein_coding	Plekho2	ENSMUST00000213554	processed_transcript		9	-1	65577100	4678
ENSMUSG00000059547	protein_coding	Fbxw26	ENSMUST00000071917	protein_coding	principal1	9	-1	109746089	1824
ENSMUSG00000031394	protein_coding	Opn1mw	ENSMUST00000033771	protein_coding	principal2	X	1	74127464	1227
ENSMUSG00000109778	TEC	Gm45504	ENSMUST00000211407	TEC		8	-1	88863074	2107
ENSMUSG00000023266	protein_coding	Frs3	ENSMUST00000128734	processed_transcript		17	1	47695225	368
ENSMUSG00000023266	protein_coding	Frs3	ENSMUST00000139405	processed_transcript		17	1	47699559	708
ENSMUSG00000031394	protein_coding	Opn1mw	ENSMUST00000101457	protein_coding	alternative2	X	1	74127466	1233
ENSMUSG00000050721	protein_coding	Plekho2	ENSMUST00000068944	protein_coding	principal1	9	-1	65580040	3273
ENSMUSG00000022012	protein_coding	Enox1	ENSMUST00000022589	protein_coding	principal2	14	1	77156763	3142
ENSMUSG00000023266	protein_coding	Frs3	ENSMUST00000138316	processed_transcript		17	1	47702065	1653
ENSMUSG00000035941	protein_coding	Ibtk	ENSMUST00000039213	protein_coding	principal1	9	-1	85749334	5650
ENSMUSG00000050721	protein_coding	Plekho2	ENSMUST00000213652	processed_transcript		9	-1	65562164	637
ENSMUSG00000022412	protein_coding	Mief1	ENSMUST00000023048	protein_coding	principal1	15	1	80234018	5148
ENSMUSG00000022012	protein_coding	Enox1	ENSMUST00000226576	retained_intron		14	1	77156780	3075
ENSMUSG00000023984	protein_coding	Gm20517	ENSMUST00000146105	retained_intron		17	1	47611589	599
ENSMUSG00000031394	protein_coding	Opn1mw	ENSMUST00000135307	processed_transcript		X	1	74127481	693
ENSMUSG00000023984	protein_coding	Gm20517	ENSMUST00000130830	retained_intron		17	1	47611598	2168
ENSMUSG00000031665	protein_coding	Sall1	ENSMUST00000034090	protein_coding	principal1	8	-1	89044162	5265
ENSMUSG00000022012	protein_coding	Enox1	ENSMUST00000228148	processed_transcript		14	1	77312076	712
ENSMUSG00000022412	protein_coding	Mief1	ENSMUST00000230654	processed_transcript		15	1	80234080	419
ENSMUSG00000023984	protein_coding	Gm20517	ENSMUST00000132397	nonsense_mediated_decay	principal1	17	1	47611613	4807
ENSMUSG00000031394	protein_coding	Opn1mw	ENSMUST00000123401	processed_transcript		X	1	74137903	749
ENSMUSG00000022012	protein_coding	Enox1	ENSMUST00000228102	retained_intron		14	1	77380579	2686
ENSMUSG00000022412	protein_coding	Mief1	ENSMUST00000229138	protein_coding	principal1	15	1	80234080	4097
ENSMUSG00000031394	protein_coding	Opn1mw	ENSMUST00000145443	processed_transcript		X	1	74137924	530
ENSMUSG00000022012	protein_coding	Enox1	ENSMUST00000227831	nonsense_mediated_decay		14	1	77380579	2910
ENSMUSG00000027326	protein_coding	Knl1	ENSMUST00000152380	protein_coding		2	1	119047119	1573
ENSMUSG00000031394	protein_coding	Opn1mw	ENSMUST00000127445	protein_coding		X	1	74138421	595
ENSMUSG00000022412	protein_coding	Mief1	ENSMUST00000229612	processed_transcript		15	1	80234093	506
ENSMUSG00000027326	protein_coding	Knl1	ENSMUST00000153300	protein_coding		2	1	119047147	370
ENSMUSG00000022012	protein_coding	Enox1	ENSMUST00000227662	protein_coding	alternative2	14	1	77380646	3064
ENSMUSG00000094790	processed_pseudogene	Gm6625	ENSMUST00000177870	processed_pseudogene		8	-1	89147058	272
ENSMUSG00000022412	protein_coding	Mief1	ENSMUST00000228788	nonsense_mediated_decay		15	1	80234101	4394
ENSMUSG00000022012	protein_coding	Enox1	ENSMUST00000228845	retained_intron		14	1	77572856	747
ENSMUSG00000081118	processed_pseudogene	Gm6758	ENSMUST00000119643	processed_pseudogene		X	-1	74136187	1055
ENSMUSG00000027326	protein_coding	Knl1	ENSMUST00000028799	protein_coding		2	1	119047150	5527
ENSMUSG00000104614	protein_coding	Fbxw27	ENSMUST00000199430	protein_coding		9	-1	109789718	824
ENSMUSG00000115363	antisense	Gm49003	ENSMUST00000227098	antisense		14	-1	77633860	349
ENSMUSG00000096549	protein_coding	Prickle4	ENSMUST00000113300	protein_coding	principal1	17	-1	47692466	1110
ENSMUSG00000022412	protein_coding	Mief1	ENSMUST00000166030	protein_coding	principal1	15	1	80234108	2712
ENSMUSG00000069962	processed_pseudogene	Gm5356	ENSMUST00000093326	processed_pseudogene		8	-1	89187560	615
ENSMUSG00000104614	protein_coding	Fbxw27	ENSMUST00000200610	processed_transcript		9	-1	109773266	519
ENSMUSG00000115733	transcribed_processed_pseudogene	Gm49001	ENSMUST00000226306	processed_transcript		14	-1	77344854	2253
ENSMUSG00000096549	protein_coding	Prickle4	ENSMUST00000142014	retained_intron		17	-1	47690896	953
ENSMUSG00000115733	transcribed_processed_pseudogene	Gm49001	ENSMUST00000227726	transcribed_processed_pseudogene		14	-1	77344186	559
ENSMUSG00000055494	lincRNA	Gm14168	ENSMUST00000144818	lincRNA		2	1	156571792	2197
ENSMUSG00000022412	protein_coding	Mief1	ENSMUST00000231110	retained_intron		15	1	80234125	2939
ENSMUSG00000096549	protein_coding	Prickle4	ENSMUST00000152214	protein_coding		17	-1	47691403	686
ENSMUSG00000104614	protein_coding	Fbxw27	ENSMUST00000212674	processed_transcript		9	-1	109770404	511
ENSMUSG00000022412	protein_coding	Mief1	ENSMUST00000228965	retained_intron		15	1	80247631	485
ENSMUSG00000104614	protein_coding	Fbxw27	ENSMUST00000211814	nonsense_mediated_decay		9	-1	109772135	402
ENSMUSG00000096549	protein_coding	Prickle4	ENSMUST00000151540	retained_intron		17	-1	47694736	490
ENSMUSG00000115798	protein_coding	AC140267.1	ENSMUST00000226485	protein_coding	principal1	15	1	80235835	213
ENSMUSG00000096549	protein_coding	Prickle4	ENSMUST00000113299	protein_coding		17	-1	47691476	990
ENSMUSG00000104614	protein_coding	Fbxw27	ENSMUST00000198666	processed_transcript		9	-1	109773903	683
ENSMUSG00000104614	protein_coding	Fbxw27	ENSMUST00000197125	protein_coding	principal1	9	-1	109790650	810
ENSMUSG00000104614	protein_coding	Fbxw27	ENSMUST00000212725	protein_coding		9	-1	109790670	1483
ENSMUSG00000024084	protein_coding	Qpct	ENSMUST00000040789	protein_coding	principal2	17	1	79051906	2059
ENSMUSG00000104614	protein_coding	Fbxw27	ENSMUST00000199197	processed_transcript		9	-1	109773845	442
ENSMUSG00000033475	protein_coding	Tomm6	ENSMUST00000113302	protein_coding	principal1	17	-1	47688183	749
ENSMUSG00000024084	protein_coding	Qpct	ENSMUST00000233916	protein_coding	alternative2	17	1	79052188	1473
ENSMUSG00000027326	protein_coding	Knl1	ENSMUST00000028802	protein_coding	principal1	2	1	119057281	7800
ENSMUSG00000035941	protein_coding	Ibtk	ENSMUST00000187521	nonsense_mediated_decay		9	-1	85749334	5290
ENSMUSG00000024084	protein_coding	Qpct	ENSMUST00000233899	retained_intron		17	1	79077002	864
ENSMUSG00000002660	protein_coding	Clpp	ENSMUST00000002735	protein_coding	principal1	17	1	56990305	983
ENSMUSG00000033475	protein_coding	Tomm6	ENSMUST00000113301	protein_coding	principal1	17	-1	47688068	594
ENSMUSG00000004902	protein_coding	Slc25a18	ENSMUST00000112682	protein_coding	principal1	6	1	120773578	1911
ENSMUSG00000035941	protein_coding	Ibtk	ENSMUST00000186322	retained_intron		9	-1	85720823	4887
ENSMUSG00000027573	protein_coding	Gid8	ENSMUST00000029090	protein_coding	principal1	2	1	180710117	1655
ENSMUSG00000027326	protein_coding	Knl1	ENSMUST00000099542	protein_coding	principal1	2	1	119047119	6525
ENSMUSG00000002660	protein_coding	Clpp	ENSMUST00000233845	retained_intron		17	1	56990392	434
ENSMUSG00000035941	protein_coding	Ibtk	ENSMUST00000188768	retained_intron		9	-1	85718538	699
ENSMUSG00000033475	protein_coding	Tomm6	ENSMUST00000143156	retained_intron		17	-1	47688386	1037
ENSMUSG00000117054	processed_pseudogene	Gm49869	ENSMUST00000232888	processed_pseudogene		17	-1	79103744	467
ENSMUSG00000027573	protein_coding	Gid8	ENSMUST00000150067	processed_transcript		2	1	180711687	344
ENSMUSG00000035941	protein_coding	Ibtk	ENSMUST00000185353	retained_intron		9	-1	85749314	3316
ENSMUSG00000027573	protein_coding	Gid8	ENSMUST00000078687	protein_coding	principal1	2	1	180712546	2063
ENSMUSG00000035941	protein_coding	Ibtk	ENSMUST00000186447	retained_intron		9	-1	85731235	653
ENSMUSG00000043668	protein_coding	Tox3	ENSMUST00000109621	protein_coding	principal1	8	-1	90348343	3356
ENSMUSG00000083672	processed_pseudogene	Kpna2-ps	ENSMUST00000120025	processed_pseudogene		17	-1	47622339	1569
ENSMUSG00000019210	protein_coding	Atp6v1e1	ENSMUST00000203527	retained_intron		6	-1	120802422	2928
ENSMUSG00000086118	processed_transcript	Gm14169	ENSMUST00000124676	processed_transcript		2	-1	156613422	2519
ENSMUSG00000117047	processed_pseudogene	Gm5230	ENSMUST00000232946	processed_pseudogene		17	-1	79258049	640
ENSMUSG00000050074	protein_coding	Spink8	ENSMUST00000200555	protein_coding		9	1	109812280	212
ENSMUSG00000043668	protein_coding	Tox3	ENSMUST00000176616	protein_coding		8	-1	90348131	1109
ENSMUSG00000043668	protein_coding	Tox3	ENSMUST00000176034	protein_coding		8	-1	90348126	715
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000084215	protein_coding	alternative2	4	1	137993022	8134
ENSMUSG00000118651	antisense	CT030740.1	ENSMUST00000239444	antisense		17	1	79354699	2504
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000127707	processed_transcript		4	1	137993476	340
ENSMUSG00000019210	protein_coding	Atp6v1e1	ENSMUST00000019354	protein_coding	principal1	6	-1	120822793	1312
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000132194	processed_transcript		4	1	137993484	489
ENSMUSG00000036533	protein_coding	Cdc42ep3	ENSMUST00000068958	protein_coding	principal1	17	-1	79355091	2265
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000203828	protein_coding		4	1	137993513	5289
ENSMUSG00000050074	protein_coding	Spink8	ENSMUST00000198988	protein_coding	principal1	9	1	109816544	768
ENSMUSG00000019210	protein_coding	Atp6v1e1	ENSMUST00000203783	protein_coding		6	-1	120818399	835
ENSMUSG00000036533	protein_coding	Cdc42ep3	ENSMUST00000233363	protein_coding		17	-1	79353007	564
ENSMUSG00000019210	protein_coding	Atp6v1e1	ENSMUST00000203432	retained_intron		6	-1	120822685	731
ENSMUSG00000050074	protein_coding	Spink8	ENSMUST00000118732	protein_coding		9	1	109816627	637
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000155142	protein_coding		4	1	138004752	897
ENSMUSG00000019210	protein_coding	Atp6v1e1	ENSMUST00000205049	protein_coding		6	-1	120822692	334
ENSMUSG00000092558	protein_coding	Med20	ENSMUST00000024778	protein_coding	principal1	17	1	47611582	2054
ENSMUSG00000019210	protein_coding	Atp6v1e1	ENSMUST00000204699	protein_coding		6	-1	120822539	517
ENSMUSG00000092558	protein_coding	Med20	ENSMUST00000149893	retained_intron		17	1	47611585	2288
ENSMUSG00000092558	protein_coding	Med20	ENSMUST00000138638	retained_intron		17	1	47611608	5680
ENSMUSG00000092558	protein_coding	Med20	ENSMUST00000133855	retained_intron		17	1	47611621	405
ENSMUSG00000070282	transcribed_processed_pseudogene	3000002C10Rik	ENSMUST00000144161	processed_transcript		9	-1	109832702	3977
ENSMUSG00000082465	processed_pseudogene	Rps6-ps3	ENSMUST00000118010	processed_pseudogene		9	-1	53690283	750
ENSMUSG00000084880	antisense	Tomm6os	ENSMUST00000155812	antisense		17	1	47687610	2944
ENSMUSG00000070282	transcribed_processed_pseudogene	3000002C10Rik	ENSMUST00000125451	processed_transcript		9	-1	109832706	1614
ENSMUSG00000055069	protein_coding	Rab39	ENSMUST00000068449	protein_coding	principal1	9	-1	53706232	2971
ENSMUSG00000070282	transcribed_processed_pseudogene	3000002C10Rik	ENSMUST00000133495	transcribed_processed_pseudogene		9	-1	109831381	1008
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000140796	protein_coding		4	1	138151687	5363
ENSMUSG00000086930	antisense	Frs3os	ENSMUST00000136531	antisense		17	-1	47701996	978
ENSMUSG00000086930	antisense	Frs3os	ENSMUST00000144979	antisense		17	-1	47700829	574
ENSMUSG00000086930	antisense	Frs3os	ENSMUST00000143962	antisense		17	-1	47701979	574
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000133902	processed_transcript		4	1	138177917	3765
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000135745	retained_intron		4	1	138180548	794
ENSMUSG00000070686	protein_coding	C87414	ENSMUST00000162964	protein_coding	principal2	5	-1	93671551	2852
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000140317	processed_transcript		4	1	138184478	470
ENSMUSG00000033436	protein_coding	Armcx2	ENSMUST00000119010	protein_coding	principal1	X	-1	134807525	3007
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000148074	processed_transcript		4	1	138201589	539
ENSMUSG00000054320	protein_coding	Lrrc36	ENSMUST00000139900	processed_transcript		8	1	105413571	649
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000084214	protein_coding	principal2	4	1	137993456	6139
ENSMUSG00000034194	protein_coding	R3hcc1	ENSMUST00000118374	protein_coding	principal1	14	-1	69707584	1726
ENSMUSG00000085358	antisense	Gm14437	ENSMUST00000152284	antisense		2	1	165442264	360
ENSMUSG00000090115	protein_coding	Usp49	ENSMUST00000024779	protein_coding	principal1	17	1	47630690	8252
ENSMUSG00000028760	protein_coding	Eif4g3	ENSMUST00000105831	protein_coding	alternative2	4	1	137993456	6235
ENSMUSG00000034194	protein_coding	R3hcc1	ENSMUST00000121142	protein_coding	principal1	14	-1	69707493	1958
ENSMUSG00000034194	protein_coding	R3hcc1	ENSMUST00000138326	retained_intron		14	-1	69700021	410
ENSMUSG00000084804	antisense	1700095J12Rik	ENSMUST00000124620	antisense		4	-1	138138518	737
ENSMUSG00000034194	protein_coding	R3hcc1	ENSMUST00000128747	retained_intron		14	-1	69705313	829
ENSMUSG00000090115	protein_coding	Usp49	ENSMUST00000145314	protein_coding		17	1	47649621	544
ENSMUSG00000034194	protein_coding	R3hcc1	ENSMUST00000147609	processed_transcript		14	-1	69707553	440
ENSMUSG00000090115	protein_coding	Usp49	ENSMUST00000152724	protein_coding		17	1	47672720	1443
ENSMUSG00000090115	protein_coding	Usp49	ENSMUST00000131550	nonsense_mediated_decay		17	1	47673301	480
ENSMUSG00000070686	protein_coding	C87414	ENSMUST00000076321	protein_coding	alternative2	5	-1	93671398	1847
ENSMUSG00000084114	processed_pseudogene	Gm8421	ENSMUST00000119439	processed_pseudogene		X	-1	71498676	305
ENSMUSG00000070686	protein_coding	C87414	ENSMUST00000159691	processed_transcript		5	-1	93671417	2464
ENSMUSG00000070686	protein_coding	C87414	ENSMUST00000161919	processed_transcript		5	-1	93638052	468
ENSMUSG00000070686	protein_coding	C87414	ENSMUST00000159578	protein_coding		5	-1	93671389	630
ENSMUSG00000068523	protein_coding	Gng5	ENSMUST00000090031	protein_coding	principal1	3	1	146499807	593
ENSMUSG00000070686	protein_coding	C87414	ENSMUST00000160382	protein_coding		5	-1	93671397	680
ENSMUSG00000068523	protein_coding	Gng5	ENSMUST00000118280	protein_coding	principal1	3	1	146499890	2419
ENSMUSG00000068523	protein_coding	Gng5	ENSMUST00000119130	protein_coding		3	1	146500109	593
ENSMUSG00000085411	lincRNA	Gm14319	ENSMUST00000142937	lincRNA		2	1	167858585	703
ENSMUSG00000109672	lincRNA	Gm45639	ENSMUST00000211205	lincRNA		8	-1	90674958	710
ENSMUSG00000109726	TEC	Gm45638	ENSMUST00000211507	TEC		8	-1	90688063	2878
ENSMUSG00000111037	lincRNA	Gm47235	ENSMUST00000215507	lincRNA		9	-1	56801261	2300
ENSMUSG00000022479	protein_coding	Vdr	ENSMUST00000023119	protein_coding	principal1	15	-1	97908310	4370
ENSMUSG00000109870	lincRNA	Gm35850	ENSMUST00000210956	lincRNA		8	-1	90740775	4653
ENSMUSG00000109870	lincRNA	Gm35850	ENSMUST00000211705	lincRNA		8	-1	90738630	2120
ENSMUSG00000022479	protein_coding	Vdr	ENSMUST00000139656	retained_intron		15	-1	97859698	813
ENSMUSG00000110212	lincRNA	Gm35963	ENSMUST00000211762	lincRNA		8	-1	90762596	1425
ENSMUSG00000022479	protein_coding	Vdr	ENSMUST00000126568	protein_coding		15	-1	97896813	389
ENSMUSG00000022479	protein_coding	Vdr	ENSMUST00000173104	protein_coding		15	-1	97910630	343
ENSMUSG00000110332	protein_coding	Gm19935	ENSMUST00000209208	protein_coding	principal1	8	-1	90817393	979
ENSMUSG00000022479	protein_coding	Vdr	ENSMUST00000174633	protein_coding		15	-1	97910630	376
ENSMUSG00000022479	protein_coding	Vdr	ENSMUST00000173611	protein_coding		15	-1	97909562	762
ENSMUSG00000107346	unprocessed_pseudogene	Gm43225	ENSMUST00000201381	unprocessed_pseudogene		5	-1	93697721	1439
ENSMUSG00000034190	protein_coding	Chmp7	ENSMUST00000224964	retained_intron		14	-1	69721236	3348
ENSMUSG00000106954	processed_pseudogene	Gm43226	ENSMUST00000202438	processed_pseudogene		5	1	93706474	259
ENSMUSG00000099980	processed_pseudogene	Gm5619	ENSMUST00000071172	processed_pseudogene		9	-1	85782627	760
ENSMUSG00000033436	protein_coding	Armcx2	ENSMUST00000113193	protein_coding	principal1	X	-1	134809221	3666
ENSMUSG00000107159	unprocessed_pseudogene	Gm7919	ENSMUST00000202043	unprocessed_pseudogene		5	1	93738096	1389
ENSMUSG00000100019	processed_pseudogene	Gm18766	ENSMUST00000189811	processed_pseudogene		9	-1	85790571	808
ENSMUSG00000033436	protein_coding	Armcx2	ENSMUST00000035559	protein_coding	principal1	X	-1	134808996	3384
ENSMUSG00000033436	protein_coding	Armcx2	ENSMUST00000141322	processed_transcript		X	-1	134807942	390
ENSMUSG00000033436	protein_coding	Armcx2	ENSMUST00000149902	processed_transcript		X	-1	134808961	656
ENSMUSG00000033436	protein_coding	Armcx2	ENSMUST00000150814	processed_transcript		X	-1	134807511	901
ENSMUSG00000034190	protein_coding	Chmp7	ENSMUST00000036381	protein_coding	principal1	14	-1	69732534	2649
ENSMUSG00000034190	protein_coding	Chmp7	ENSMUST00000225036	retained_intron		14	-1	69732541	3115
ENSMUSG00000034190	protein_coding	Chmp7	ENSMUST00000224601	retained_intron		14	-1	69730875	2447
ENSMUSG00000033436	protein_coding	Armcx2	ENSMUST00000168264	protein_coding	principal1	X	-1	134809221	3773
ENSMUSG00000025268	protein_coding	Maged2	ENSMUST00000112699	protein_coding	principal1	X	-1	150814345	2183
ENSMUSG00000035274	protein_coding	Tpbg	ENSMUST00000006559	protein_coding	principal1	9	1	85842380	3603
ENSMUSG00000035274	protein_coding	Tpbg	ENSMUST00000098500	protein_coding	principal1	9	1	85842865	3481
ENSMUSG00000035274	protein_coding	Tpbg	ENSMUST00000185559	processed_transcript		9	1	85843361	409
ENSMUSG00000056031	processed_transcript	9330154J02Rik	ENSMUST00000189191	antisense		9	-1	85844131	2334
ENSMUSG00000056031	processed_transcript	9330154J02Rik	ENSMUST00000185960	antisense		9	-1	85844323	2557
ENSMUSG00000056031	processed_transcript	9330154J02Rik	ENSMUST00000187891	retained_intron		9	-1	85843284	2133
ENSMUSG00000025268	protein_coding	Maged2	ENSMUST00000145342	retained_intron		X	-1	150812968	2572
ENSMUSG00000056031	processed_transcript	9330154J02Rik	ENSMUST00000069896	processed_transcript		9	-1	85843285	1486
ENSMUSG00000025268	protein_coding	Maged2	ENSMUST00000112700	protein_coding	principal1	X	-1	150813707	2107
ENSMUSG00000025268	protein_coding	Maged2	ENSMUST00000026302	protein_coding	principal1	X	-1	150814269	2207
ENSMUSG00000110946	lincRNA	Gm47604	ENSMUST00000213921	lincRNA		9	-1	85943200	205
ENSMUSG00000025268	protein_coding	Maged2	ENSMUST00000147152	protein_coding		X	-1	150813078	1002
ENSMUSG00000111418	processed_pseudogene	Gm18016	ENSMUST00000216119	processed_pseudogene		9	-1	86176015	801
ENSMUSG00000025268	protein_coding	Maged2	ENSMUST00000143843	protein_coding		X	-1	150813154	933
ENSMUSG00000023393	protein_coding	Slc17a9	ENSMUST00000094218	protein_coding	principal1	2	1	180725263	2275
ENSMUSG00000025268	protein_coding	Maged2	ENSMUST00000124537	processed_transcript		X	-1	150812461	615
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000200005	protein_coding		9	1	109832749	719
ENSMUSG00000025268	protein_coding	Maged2	ENSMUST00000129768	protein_coding		X	-1	150814281	684
ENSMUSG00000023393	protein_coding	Slc17a9	ENSMUST00000151882	retained_intron		2	1	180725379	1158
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000035053	protein_coding	principal1	9	1	109832758	1074
ENSMUSG00000025268	protein_coding	Maged2	ENSMUST00000131241	protein_coding		X	-1	150812958	645
ENSMUSG00000023393	protein_coding	Slc17a9	ENSMUST00000139817	processed_transcript		2	1	180725400	754
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000199203	retained_intron		9	1	109832771	431
ENSMUSG00000025268	protein_coding	Maged2	ENSMUST00000112697	protein_coding	principal1	X	-1	150812715	1851
ENSMUSG00000023393	protein_coding	Slc17a9	ENSMUST00000154882	processed_transcript		2	1	180736418	621
ENSMUSG00000023393	protein_coding	Slc17a9	ENSMUST00000140955	retained_intron		2	1	180738274	506
ENSMUSG00000028187	protein_coding	Rpf1	ENSMUST00000029838	protein_coding	principal1	3	-1	146521429	1661
ENSMUSG00000028187	protein_coding	Rpf1	ENSMUST00000199174	protein_coding		3	-1	146508224	1120
ENSMUSG00000018459	protein_coding	Slc13a3	ENSMUST00000029208	protein_coding	principal2	2	-1	165473230	3524
ENSMUSG00000028187	protein_coding	Rpf1	ENSMUST00000200583	retained_intron		3	-1	146508492	813
ENSMUSG00000018459	protein_coding	Slc13a3	ENSMUST00000109279	protein_coding	alternative2	2	-1	165473230	3131
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000196797	processed_transcript		9	1	109832771	762
ENSMUSG00000028187	protein_coding	Rpf1	ENSMUST00000196909	processed_transcript		3	-1	146521051	807
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000200345	protein_coding		9	1	109832781	527
ENSMUSG00000018459	protein_coding	Slc13a3	ENSMUST00000145513	retained_intron		2	-1	165409066	397
ENSMUSG00000028187	protein_coding	Rpf1	ENSMUST00000199079	protein_coding		3	-1	146521411	1978
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000005400	retained_intron		15	1	10177238	3205
ENSMUSG00000018459	protein_coding	Slc13a3	ENSMUST00000143136	retained_intron		2	-1	165420293	456
ENSMUSG00000018459	protein_coding	Slc13a3	ENSMUST00000147107	retained_intron		2	-1	165473199	1968
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000145428	processed_transcript		15	1	10177414	3535
ENSMUSG00000114316	processed_pseudogene	Gm17740	ENSMUST00000223676	processed_pseudogene		14	-1	69763538	2368
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000150863	protein_coding		11	1	108425192	3453
ENSMUSG00000105407	processed_pseudogene	Gm36259	ENSMUST00000197340	processed_pseudogene		3	-1	146563269	392
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000046859	protein_coding	principal1	12	-1	99393797	7705
ENSMUSG00000032415	protein_coding	Ube2cbp	ENSMUST00000034986	protein_coding	principal1	9	-1	86464950	1790
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000200091	processed_transcript		9	1	109832786	715
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000198201	processed_transcript		9	1	109832787	930
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000177451	protein_coding	principal1	12	-1	99393072	2882
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000196762	retained_intron		9	1	109832807	489
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000143212	retained_intron		11	1	108425277	1437
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000199758	nonsense_mediated_decay		9	1	109832886	599
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000197627	protein_coding		9	1	109833030	905
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000222458	nonsense_mediated_decay		12	-1	99291278	617
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000200468	protein_coding	principal1	9	1	109833042	865
ENSMUSG00000032415	protein_coding	Ube2cbp	ENSMUST00000121189	nonsense_mediated_decay		9	-1	86464950	1124
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000222261	processed_transcript		12	-1	99330063	404
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000176959	retained_intron		12	-1	99291389	387
ENSMUSG00000083731	processed_pseudogene	Gm16202	ENSMUST00000117532	processed_pseudogene		9	-1	86316684	544
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000176829	processed_transcript		12	-1	99291277	168
ENSMUSG00000036368	protein_coding	Rmdn2	ENSMUST00000223924	protein_coding		17	1	79611863	410
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000200660	processed_transcript		9	1	109833047	481
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000176311	processed_transcript		12	-1	99357019	432
ENSMUSG00000036368	protein_coding	Rmdn2	ENSMUST00000224014	protein_coding		17	1	79613981	514
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000149683	protein_coding		11	1	108425291	506
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000199181	retained_intron		9	1	109833191	409
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000138538	protein_coding		11	1	108425461	1881
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000196312	processed_transcript		9	1	109833193	463
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000177269	protein_coding		12	-1	99412605	726
ENSMUSG00000032478	protein_coding	Nme6	ENSMUST00000196425	processed_transcript		9	1	109833291	773
ENSMUSG00000045620	protein_coding	Odf3l1	ENSMUST00000055036	protein_coding	principal1	9	-1	56851963	1080
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000130515	protein_coding	principal2	11	1	108425504	3395
ENSMUSG00000106448	TEC	Gm43486	ENSMUST00000196431	TEC		3	1	158294414	4339
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000177287	retained_intron		12	-1	99450097	1586
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000182729	protein_coding	alternative2	11	1	108425612	2850
ENSMUSG00000106043	TEC	Gm42968	ENSMUST00000198578	TEC		3	1	158180236	1372
ENSMUSG00000045620	protein_coding	Odf3l1	ENSMUST00000215694	protein_coding		9	-1	56864679	1212
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000133670	protein_coding		11	1	108498301	1985
ENSMUSG00000104647	TEC	Gm43485	ENSMUST00000199292	TEC		3	1	158206869	1710
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000182249	retained_intron		11	1	108531406	600
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000146912	protein_coding		11	1	108587077	759
ENSMUSG00000022892	protein_coding	App	ENSMUST00000227723	protein_coding	alternative2	16	-1	85173766	8167
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000183042	processed_transcript		11	1	108605227	587
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000176928	protein_coding		12	-1	99563508	696
ENSMUSG00000022892	protein_coding	App	ENSMUST00000227654	retained_intron		16	-1	84963381	1655
ENSMUSG00000022892	protein_coding	App	ENSMUST00000227737	protein_coding		16	-1	85173705	2827
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000223484	protein_coding		12	-1	99563536	405
ENSMUSG00000022892	protein_coding	App	ENSMUST00000226801	protein_coding	alternative2	16	-1	85173707	3299
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000222918	retained_intron		12	-1	99563582	1450
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000221283	processed_transcript		12	-1	99563572	360
ENSMUSG00000038357	protein_coding	Camp	ENSMUST00000112022	protein_coding	principal1	9	-1	109849617	758
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000129814	processed_transcript		11	1	108637415	788
ENSMUSG00000033713	protein_coding	Foxn3	ENSMUST00000085108	protein_coding	principal1	12	-1	99450074	2611
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000182735	processed_transcript		11	1	108641300	756
ENSMUSG00000093419	processed_pseudogene	Gm19898	ENSMUST00000177490	processed_pseudogene		12	1	99245671	251
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000106718	protein_coding		11	1	108682602	839
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000106715	protein_coding		11	1	108682609	1161
ENSMUSG00000068739	protein_coding	Sars	ENSMUST00000090553	protein_coding	principal1	3	-1	108445198	3570
ENSMUSG00000093465	sense_intronic	Gm20682	ENSMUST00000176552	sense_intronic		12	-1	99296620	3517
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000106724	protein_coding		11	1	108682618	678
ENSMUSG00000022892	protein_coding	App	ENSMUST00000005406	protein_coding	principal2	16	-1	85173758	3176
ENSMUSG00000068739	protein_coding	Sars	ENSMUST00000102625	protein_coding		3	-1	108445169	1866
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000151755	processed_transcript		11	1	108710072	381
ENSMUSG00000068739	protein_coding	Sars	ENSMUST00000132467	protein_coding		3	-1	108445143	1067
ENSMUSG00000022892	protein_coding	App	ENSMUST00000227021	protein_coding	alternative2	16	-1	85173739	3264
ENSMUSG00000033731	antisense	3300002A11Rik	ENSMUST00000126476	antisense		12	1	99341154	418
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000132978	protein_coding		11	1	108752205	798
ENSMUSG00000022892	protein_coding	App	ENSMUST00000226232	protein_coding	alternative2	16	-1	85173735	3120
ENSMUSG00000033731	antisense	3300002A11Rik	ENSMUST00000046994	antisense		12	1	99346398	654
ENSMUSG00000068739	protein_coding	Sars	ENSMUST00000153499	protein_coding		3	-1	108445209	637
ENSMUSG00000113610	TEC	Gm47132	ENSMUST00000223488	TEC		12	-1	99377248	653
ENSMUSG00000068739	protein_coding	Sars	ENSMUST00000197647	retained_intron		3	-1	108445156	1801
ENSMUSG00000022892	protein_coding	App	ENSMUST00000228375	processed_transcript		16	-1	84977983	726
ENSMUSG00000113106	TEC	Gm47139	ENSMUST00000221888	TEC		12	-1	99362028	2158
ENSMUSG00000020728	protein_coding	Cep112	ENSMUST00000061287	protein_coding	principal2	11	1	108425266	3485
ENSMUSG00000113003	TEC	Gm47138	ENSMUST00000223213	TEC		12	-1	99369913	3370
ENSMUSG00000083723	processed_pseudogene	Rpl23a-ps14	ENSMUST00000118777	processed_pseudogene		11	1	108716483	424
ENSMUSG00000106101	processed_pseudogene	Gm43438	ENSMUST00000198133	processed_pseudogene		3	-1	108451648	379
ENSMUSG00000022892	protein_coding	App	ENSMUST00000227753	processed_transcript		16	-1	85024934	658
ENSMUSG00000085811	sense_intronic	Cep112it	ENSMUST00000143781	sense_intronic		11	1	108820333	4813
ENSMUSG00000107247	unprocessed_pseudogene	Gm43227	ENSMUST00000202239	unprocessed_pseudogene		5	1	93770300	677
ENSMUSG00000022892	protein_coding	App	ENSMUST00000227990	processed_transcript		16	-1	85173704	2197
ENSMUSG00000022892	protein_coding	App	ENSMUST00000228509	retained_intron		16	-1	85027625	3829
ENSMUSG00000007591	protein_coding	Tssk4	ENSMUST00000007735	protein_coding		14	1	55650184	1420
ENSMUSG00000115108	processed_pseudogene	Gm49228	ENSMUST00000227026	processed_pseudogene		16	1	85021622	396
ENSMUSG00000115518	antisense	Gm10791	ENSMUST00000227835	antisense		16	1	84972214	1651
ENSMUSG00000074872	protein_coding	Ctxn2	ENSMUST00000238754	protein_coding	alternative1	2	1	125136633	509
ENSMUSG00000107392	protein_coding	Gm7792	ENSMUST00000201555	protein_coding	principal1	5	1	93843776	2473
ENSMUSG00000074872	protein_coding	Ctxn2	ENSMUST00000238377	protein_coding	alternative1	2	1	125136692	1030
ENSMUSG00000041064	protein_coding	Pif1	ENSMUST00000134538	protein_coding	principal1	9	1	65587160	3395
ENSMUSG00000036368	protein_coding	Rmdn2	ENSMUST00000040368	protein_coding	principal1	17	1	79614900	1802
ENSMUSG00000074872	protein_coding	Ctxn2	ENSMUST00000099452	protein_coding	principal2	2	1	125136692	1028
ENSMUSG00000041064	protein_coding	Pif1	ENSMUST00000136205	processed_transcript		9	1	65587182	371
ENSMUSG00000036368	protein_coding	Rmdn2	ENSMUST00000225357	protein_coding	principal1	17	1	79615062	2118
ENSMUSG00000052459	protein_coding	Atp6v1a	ENSMUST00000114666	protein_coding	principal1	16	-1	44139305	4234
ENSMUSG00000036368	protein_coding	Rmdn2	ENSMUST00000086570	protein_coding		17	1	79621770	925
ENSMUSG00000007591	protein_coding	Tssk4	ENSMUST00000164809	protein_coding		14	1	55650184	1686
ENSMUSG00000036368	protein_coding	Rmdn2	ENSMUST00000223555	processed_transcript		17	1	79626651	1372
ENSMUSG00000052459	protein_coding	Atp6v1a	ENSMUST00000063661	protein_coding	principal1	16	-1	44139196	3896
ENSMUSG00000041064	protein_coding	Pif1	ENSMUST00000154970	nonsense_mediated_decay		9	1	65587193	3725
ENSMUSG00000036368	protein_coding	Rmdn2	ENSMUST00000224618	protein_coding		17	1	79626669	412
ENSMUSG00000036368	protein_coding	Rmdn2	ENSMUST00000226004	protein_coding		17	1	79672400	237
ENSMUSG00000041064	protein_coding	Pif1	ENSMUST00000152885	retained_intron		9	1	65587205	2450
ENSMUSG00000007591	protein_coding	Tssk4	ENSMUST00000228395	protein_coding	principal5	14	1	55650184	1273
ENSMUSG00000036368	protein_coding	Rmdn2	ENSMUST00000224097	protein_coding		17	1	79681633	361
ENSMUSG00000052459	protein_coding	Atp6v1a	ENSMUST00000130036	retained_intron		16	-1	44138980	3093
ENSMUSG00000052459	protein_coding	Atp6v1a	ENSMUST00000137557	protein_coding		16	-1	44139630	894
ENSMUSG00000054320	protein_coding	Lrrc36	ENSMUST00000213547	protein_coding	alternative2	8	1	105413622	2396
ENSMUSG00000041064	protein_coding	Pif1	ENSMUST00000047099	protein_coding	principal1	9	1	65587205	3685
ENSMUSG00000052459	protein_coding	Atp6v1a	ENSMUST00000124102	protein_coding		16	-1	44139018	629
ENSMUSG00000007591	protein_coding	Tssk4	ENSMUST00000226591	protein_coding	alternative1	14	1	55650184	1243
ENSMUSG00000111084	processed_pseudogene	Gm48292	ENSMUST00000213450	processed_pseudogene		9	1	53746069	551
ENSMUSG00000054320	protein_coding	Lrrc36	ENSMUST00000216765	protein_coding	alternative2	8	1	105413628	2301
ENSMUSG00000041064	protein_coding	Pif1	ENSMUST00000152529	retained_intron		9	1	65587213	3897
ENSMUSG00000052369	protein_coding	Tmem106c	ENSMUST00000229433	protein_coding		15	1	97964200	631
ENSMUSG00000052459	protein_coding	Atp6v1a	ENSMUST00000147025	protein_coding		16	-1	44139705	440
ENSMUSG00000007591	protein_coding	Tssk4	ENSMUST00000227297	nonsense_mediated_decay		14	1	55650205	1426
ENSMUSG00000041064	protein_coding	Pif1	ENSMUST00000131483	protein_coding	principal1	9	1	65587221	3309
ENSMUSG00000041064	protein_coding	Pif1	ENSMUST00000141046	protein_coding		9	1	65587226	742
ENSMUSG00000007591	protein_coding	Tssk4	ENSMUST00000226497	protein_coding		14	1	55650207	1235
ENSMUSG00000041064	protein_coding	Pif1	ENSMUST00000239405	protein_coding		9	1	65587205	3680
ENSMUSG00000007591	protein_coding	Tssk4	ENSMUST00000228041	protein_coding		14	1	55650207	1217
ENSMUSG00000085677	lincRNA	4930594O21Rik	ENSMUST00000144981	lincRNA		3	1	37613913	682
ENSMUSG00000085677	lincRNA	4930594O21Rik	ENSMUST00000129750	lincRNA		3	1	37613923	629
ENSMUSG00000054320	protein_coding	Lrrc36	ENSMUST00000067305	protein_coding		8	1	105427640	2082
ENSMUSG00000028176	protein_coding	Lrrc7	ENSMUST00000200196	protein_coding		3	-1	158353433	6142
ENSMUSG00000104418	processed_pseudogene	Gm37070	ENSMUST00000193272	processed_pseudogene		1	-1	179925411	460
ENSMUSG00000054320	protein_coding	Lrrc36	ENSMUST00000216457	nonsense_mediated_decay		8	1	105443839	1699
ENSMUSG00000054320	protein_coding	Lrrc36	ENSMUST00000109355	protein_coding	principal2	8	1	105413622	2411
ENSMUSG00000042195	protein_coding	Slc35f2	ENSMUST00000048670	protein_coding	principal1	9	1	53771538	2558
ENSMUSG00000028176	protein_coding	Lrrc7	ENSMUST00000200137	protein_coding	principal2	3	-1	158562221	7321
ENSMUSG00000052369	protein_coding	Tmem106c	ENSMUST00000229428	protein_coding	principal1	15	1	97964229	1455
ENSMUSG00000042195	protein_coding	Slc35f2	ENSMUST00000216515	retained_intron		9	1	53810717	1685
ENSMUSG00000104605	TEC	Gm42922	ENSMUST00000195887	TEC		3	-1	37640656	2078
ENSMUSG00000109008	lincRNA	Gm44899	ENSMUST00000209433	lincRNA		7	-1	80987257	511
ENSMUSG00000028176	protein_coding	Lrrc7	ENSMUST00000199890	protein_coding		3	-1	158562134	6326
ENSMUSG00000052369	protein_coding	Tmem106c	ENSMUST00000064200	protein_coding	principal1	15	1	97964230	1623
ENSMUSG00000109008	lincRNA	Gm44899	ENSMUST00000207451	lincRNA		7	-1	80993415	391
ENSMUSG00000028176	protein_coding	Lrrc7	ENSMUST00000238317	protein_coding	alternative2	3	-1	158562134	6267
ENSMUSG00000052369	protein_coding	Tmem106c	ENSMUST00000230072	protein_coding		15	1	97964239	401
ENSMUSG00000109367	processed_pseudogene	Gm18782	ENSMUST00000209023	processed_pseudogene		7	1	80979893	1399
ENSMUSG00000028176	protein_coding	Lrrc7	ENSMUST00000197866	retained_intron		3	-1	158561345	2405
ENSMUSG00000052369	protein_coding	Tmem106c	ENSMUST00000231144	protein_coding		15	1	97964256	734
ENSMUSG00000028176	protein_coding	Lrrc7	ENSMUST00000198284	retained_intron		3	-1	158561336	688
ENSMUSG00000042045	protein_coding	Sln	ENSMUST00000048485	protein_coding	principal1	9	1	53850164	1318
ENSMUSG00000052369	protein_coding	Tmem106c	ENSMUST00000230144	retained_intron		15	1	97964257	727
ENSMUSG00000028176	protein_coding	Lrrc7	ENSMUST00000106044	protein_coding	alternative2	3	-1	158562221	5918
ENSMUSG00000052369	protein_coding	Tmem106c	ENSMUST00000230361	processed_transcript		15	1	97964270	585
ENSMUSG00000052369	protein_coding	Tmem106c	ENSMUST00000230005	retained_intron		15	1	97964585	927
ENSMUSG00000052369	protein_coding	Tmem106c	ENSMUST00000231079	retained_intron		15	1	97965777	571
ENSMUSG00000024087	protein_coding	Cyp1b1	ENSMUST00000234927	nonsense_mediated_decay		17	-1	79713655	1436
ENSMUSG00000037211	protein_coding	Spry1	ENSMUST00000108109	protein_coding	principal1	3	1	37639947	2451
ENSMUSG00000026556	protein_coding	Vangl2	ENSMUST00000153662	protein_coding		1	-1	172026711	704
ENSMUSG00000037211	protein_coding	Spry1	ENSMUST00000038569	protein_coding	principal1	3	1	37639958	2481
ENSMUSG00000037211	protein_coding	Spry1	ENSMUST00000108107	protein_coding	principal1	3	1	37640080	2773
ENSMUSG00000024087	protein_coding	Cyp1b1	ENSMUST00000234361	protein_coding		17	-1	79715061	3398
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000137867	nonsense_mediated_decay		15	1	10177646	3435
ENSMUSG00000024087	protein_coding	Cyp1b1	ENSMUST00000024894	protein_coding	principal1	17	-1	79715041	5128
ENSMUSG00000031090	protein_coding	Nadsyn1	ENSMUST00000033415	protein_coding	principal1	7	-1	143822841	2641
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000124470	protein_coding	principal3	15	1	10177655	9900
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000132361	retained_intron		15	1	10177781	1209
ENSMUSG00000026405	protein_coding	C4bp	ENSMUST00000027657	protein_coding	principal1	1	-1	130661632	3045
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000138135	processed_transcript		15	1	10213465	688
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000130720	protein_coding		15	1	10215955	641
ENSMUSG00000059830	processed_pseudogene	Gm16380	ENSMUST00000077997	processed_pseudogene		9	1	53884084	478
ENSMUSG00000026405	protein_coding	C4bp	ENSMUST00000171642	protein_coding		1	-1	130648419	597
ENSMUSG00000031090	protein_coding	Nadsyn1	ENSMUST00000156638	nonsense_mediated_decay		7	-1	143822787	2142
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000128450	protein_coding	alternative2	15	1	10223986	1278
ENSMUSG00000031090	protein_coding	Nadsyn1	ENSMUST00000132520	nonsense_mediated_decay		7	-1	143822842	2287
ENSMUSG00000026405	protein_coding	C4bp	ENSMUST00000137276	protein_coding		1	-1	130661610	965
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000148257	protein_coding	alternative2	15	1	10223986	1190
ENSMUSG00000031090	protein_coding	Nadsyn1	ENSMUST00000155088	retained_intron		7	-1	143798841	540
ENSMUSG00000026405	protein_coding	C4bp	ENSMUST00000190624	retained_intron		1	-1	130661624	3845
ENSMUSG00000031090	protein_coding	Nadsyn1	ENSMUST00000143366	nonsense_mediated_decay		7	-1	143822818	609
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000128921	protein_coding	alternative2	15	1	10223986	3836
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000134410	protein_coding		15	1	10249560	669
ENSMUSG00000039725	protein_coding	Trp53rka	ENSMUST00000039007	protein_coding	principal1	2	-1	165493324	1880
ENSMUSG00000005268	protein_coding	Prlr	ENSMUST00000127467	protein_coding		15	1	10314102	564
ENSMUSG00000031090	protein_coding	Nadsyn1	ENSMUST00000143210	retained_intron		7	-1	143822748	568
ENSMUSG00000050366	protein_coding	Olfr524	ENSMUST00000215815	protein_coding	principal1	7	-1	140205964	5044
ENSMUSG00000031090	protein_coding	Nadsyn1	ENSMUST00000156779	protein_coding		7	-1	143822805	370
ENSMUSG00000020844	protein_coding	Nxn	ENSMUST00000021204	protein_coding	principal1	11	-1	76399140	2755
ENSMUSG00000039725	protein_coding	Trp53rka	ENSMUST00000125497	processed_transcript		2	-1	165493116	842
ENSMUSG00000031090	protein_coding	Nadsyn1	ENSMUST00000142749	retained_intron		7	-1	143822849	761
ENSMUSG00000050366	protein_coding	Olfr524	ENSMUST00000051943	protein_coding	principal1	7	-1	140202800	1058
ENSMUSG00000020844	protein_coding	Nxn	ENSMUST00000131472	processed_transcript		11	-1	76399068	852
ENSMUSG00000084896	processed_transcript	Gm11632	ENSMUST00000145489	processed_transcript		11	-1	98085424	674
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000138460	processed_transcript		X	-1	105070124	3732
ENSMUSG00000089678	protein_coding	Agxt2	ENSMUST00000110540	processed_transcript		15	1	10358532	812
ENSMUSG00000117426	lincRNA	Gm33055	ENSMUST00000234743	lincRNA		17	1	79733874	392
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000140954	processed_transcript		X	-1	105070124	3287
ENSMUSG00000032477	protein_coding	Cdc25a	ENSMUST00000094324	protein_coding	principal1	9	1	109875579	3632
ENSMUSG00000117616	lincRNA	Gm49984	ENSMUST00000234208	lincRNA		17	1	79771962	1082
ENSMUSG00000032477	protein_coding	Cdc25a	ENSMUST00000198848	nonsense_mediated_decay		9	1	109875940	441
ENSMUSG00000032477	protein_coding	Cdc25a	ENSMUST00000198308	protein_coding		9	1	109876306	2880
ENSMUSG00000089678	protein_coding	Agxt2	ENSMUST00000110541	protein_coding		15	1	10358537	1222
ENSMUSG00000032477	protein_coding	Cdc25a	ENSMUST00000199787	protein_coding		9	1	109883604	709
ENSMUSG00000062154	protein_coding	Tex33	ENSMUST00000169575	protein_coding	alternative2	15	-1	78388769	942
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000154334	processed_transcript		X	-1	105070042	1887
ENSMUSG00000032477	protein_coding	Cdc25a	ENSMUST00000197945	retained_intron		9	1	109884330	732
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000156974	processed_transcript		X	-1	105070046	1691
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000127533	processed_transcript		X	-1	105070096	3164
ENSMUSG00000032477	protein_coding	Cdc25a	ENSMUST00000199353	retained_intron		9	1	109887716	3755
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000127409	processed_transcript		X	-1	105070035	631
ENSMUSG00000089678	protein_coding	Agxt2	ENSMUST00000110542	protein_coding	alternative2	15	1	10358537	2198
ENSMUSG00000032477	protein_coding	Cdc25a	ENSMUST00000198219	retained_intron		9	1	109888836	440
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000144849	processed_transcript		X	-1	105079413	654
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000136211	processed_transcript		X	-1	105079609	659
ENSMUSG00000089678	protein_coding	Agxt2	ENSMUST00000022858	protein_coding	principal3	15	1	10358579	1825
ENSMUSG00000105191	processed_pseudogene	Gm4644	ENSMUST00000197587	processed_pseudogene		9	-1	109924750	400
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000138137	processed_transcript		X	-1	105079437	985
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000144774	processed_transcript		X	-1	105075791	247
ENSMUSG00000094814	protein_coding	Gm21973	ENSMUST00000157020	nonsense_mediated_decay	principal1	15	1	10325380	358
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000146227	processed_transcript		X	-1	105070108	531
ENSMUSG00000105683	TEC	Gm43487	ENSMUST00000200331	TEC		3	1	158488991	1031
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000135114	processed_transcript		X	-1	105070087	1007
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000141136	retained_intron		X	-1	105070094	924
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000123850	processed_transcript		X	-1	105070104	630
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000147478	processed_transcript		X	-1	105070043	311
ENSMUSG00000045502	protein_coding	Hcar2	ENSMUST00000057145	protein_coding	principal1	5	-1	123865499	1930
ENSMUSG00000087550	processed_transcript	Gm14343	ENSMUST00000154524	processed_transcript		2	-1	180775403	731
ENSMUSG00000087174	processed_transcript	5530601H04Rik	ENSMUST00000144366	processed_transcript		X	-1	105070055	709
ENSMUSG00000062154	protein_coding	Tex33	ENSMUST00000165170	protein_coding	principal4	15	-1	78395912	1072
ENSMUSG00000045493	protein_coding	Bhlhe23	ENSMUST00000108878	protein_coding	principal1	2	-1	180776900	2520
ENSMUSG00000062154	protein_coding	Tex33	ENSMUST00000229878	protein_coding		15	-1	78395902	673
ENSMUSG00000049241	protein_coding	Hcar1	ENSMUST00000164267	protein_coding	principal1	5	-1	123880020	3285
ENSMUSG00000026556	protein_coding	Vangl2	ENSMUST00000027837	protein_coding	principal1	1	-1	172027295	5698
ENSMUSG00000062154	protein_coding	Tex33	ENSMUST00000074380	protein_coding	principal4	15	-1	78395912	1147
ENSMUSG00000026556	protein_coding	Vangl2	ENSMUST00000111264	protein_coding		1	-1	172027295	2349
ENSMUSG00000115257	lincRNA	Gm30467	ENSMUST00000227970	lincRNA		14	1	77780974	1331
ENSMUSG00000026556	protein_coding	Vangl2	ENSMUST00000111263	protein_coding	principal1	1	-1	172028444	6528
ENSMUSG00000075512	lincRNA	Gm1587	ENSMUST00000228721	lincRNA		14	-1	77798968	1354
ENSMUSG00000026556	protein_coding	Vangl2	ENSMUST00000138714	protein_coding		1	-1	172027268	881
ENSMUSG00000005621	protein_coding	Zfp592	ENSMUST00000107353	protein_coding	principal1	7	1	80993681	7297
ENSMUSG00000026556	protein_coding	Vangl2	ENSMUST00000148363	processed_transcript		1	-1	172009029	836
ENSMUSG00000005621	protein_coding	Zfp592	ENSMUST00000176477	processed_transcript		7	1	81023420	516
ENSMUSG00000022074	protein_coding	Tnfrsf10b	ENSMUST00000022663	protein_coding	principal1	14	1	69767472	3179
ENSMUSG00000005621	protein_coding	Zfp592	ENSMUST00000149508	retained_intron		7	1	81037739	463
ENSMUSG00000083236	processed_pseudogene	Gm7222	ENSMUST00000117512	processed_pseudogene		X	-1	134829045	906
ENSMUSG00000005621	protein_coding	Zfp592	ENSMUST00000125137	retained_intron		7	1	81038015	692
ENSMUSG00000022074	protein_coding	Tnfrsf10b	ENSMUST00000224533	retained_intron		14	1	69767485	2787
ENSMUSG00000022074	protein_coding	Tnfrsf10b	ENSMUST00000224235	retained_intron		14	1	69777469	1009
ENSMUSG00000074507	lincRNA	Gm14340	ENSMUST00000148700	lincRNA		2	-1	180824630	1913
ENSMUSG00000002661	protein_coding	Alkbh7	ENSMUST00000074141	protein_coding		17	1	56997339	736
ENSMUSG00000081292	processed_pseudogene	Gm15018	ENSMUST00000117090	processed_pseudogene		X	-1	134906631	633
ENSMUSG00000109302	TEC	Gm44967	ENSMUST00000207047	TEC		7	1	80994683	631
ENSMUSG00000002661	protein_coding	Alkbh7	ENSMUST00000002737	protein_coding	principal1	17	1	56997343	917
ENSMUSG00000085728	lincRNA	Gm14339	ENSMUST00000146224	lincRNA		2	1	180847652	423
ENSMUSG00000086166	lincRNA	Gm14342	ENSMUST00000137629	lincRNA		2	-1	180889660	2119
ENSMUSG00000002661	protein_coding	Alkbh7	ENSMUST00000149632	retained_intron		17	1	56998480	524
ENSMUSG00000020883	protein_coding	Fbxl20	ENSMUST00000103143	protein_coding	principal1	11	-1	98149612	8601
ENSMUSG00000085428	lincRNA	Gm14344	ENSMUST00000139338	lincRNA		2	1	180836481	580
ENSMUSG00000033882	protein_coding	Rbm46	ENSMUST00000048647	protein_coding	principal3	3	-1	82876483	1794
ENSMUSG00000020883	protein_coding	Fbxl20	ENSMUST00000135969	retained_intron		11	-1	98149606	4028
ENSMUSG00000022442	protein_coding	Ttll1	ENSMUST00000016897	protein_coding	principal1	15	-1	83510893	2060
ENSMUSG00000033882	protein_coding	Rbm46	ENSMUST00000182637	protein_coding		3	-1	82866647	2058
ENSMUSG00000020883	protein_coding	Fbxl20	ENSMUST00000147971	protein_coding		11	-1	98100063	522
ENSMUSG00000022442	protein_coding	Ttll1	ENSMUST00000109480	protein_coding	principal1	15	-1	83510881	1876
ENSMUSG00000020883	protein_coding	Fbxl20	ENSMUST00000150378	protein_coding		11	-1	98150403	871
ENSMUSG00000033882	protein_coding	Rbm46	ENSMUST00000182818	protein_coding	alternative1	3	-1	82866647	2115
ENSMUSG00000020883	protein_coding	Fbxl20	ENSMUST00000146399	processed_transcript		11	-1	98128963	455
ENSMUSG00000022442	protein_coding	Ttll1	ENSMUST00000109479	protein_coding		15	-1	83510874	1997
ENSMUSG00000020883	protein_coding	Fbxl20	ENSMUST00000149327	protein_coding		11	-1	98128963	428
ENSMUSG00000022442	protein_coding	Ttll1	ENSMUST00000154401	protein_coding		15	-1	83510793	674
ENSMUSG00000020883	protein_coding	Fbxl20	ENSMUST00000148473	processed_transcript		11	-1	98128947	474
ENSMUSG00000022013	protein_coding	Dnajc15	ENSMUST00000226459	protein_coding	principal1	14	-1	77874926	6193
ENSMUSG00000022013	protein_coding	Dnajc15	ENSMUST00000227249	processed_transcript		14	-1	77840209	419
ENSMUSG00000024043	protein_coding	Arhgap28	ENSMUST00000024840	protein_coding	principal3	17	-1	68004120	5322
ENSMUSG00000002329	protein_coding	Mdp1	ENSMUST00000002400	protein_coding	principal1	14	-1	55660508	1733
ENSMUSG00000022013	protein_coding	Dnajc15	ENSMUST00000022590	nonsense_mediated_decay		14	-1	77875125	674
ENSMUSG00000087149	transcribed_unprocessed_pseudogene	Itih5l-ps	ENSMUST00000145639	transcribed_unprocessed_pseudogene		X	1	150826972	3964
ENSMUSG00000028185	protein_coding	Dnase2b	ENSMUST00000029836	protein_coding	principal1	3	-1	146596612	2566
ENSMUSG00000087149	transcribed_unprocessed_pseudogene	Itih5l-ps	ENSMUST00000154172	processed_transcript		X	1	150849966	475
ENSMUSG00000024043	protein_coding	Arhgap28	ENSMUST00000164647	protein_coding	alternative2	17	-1	67950940	2754
ENSMUSG00000002329	protein_coding	Mdp1	ENSMUST00000226659	retained_intron		14	-1	55660451	1730
ENSMUSG00000028185	protein_coding	Dnase2b	ENSMUST00000200633	protein_coding	principal1	3	-1	146615596	2685
ENSMUSG00000087149	transcribed_unprocessed_pseudogene	Itih5l-ps	ENSMUST00000148862	processed_transcript		X	1	150853579	808
ENSMUSG00000002329	protein_coding	Mdp1	ENSMUST00000228093	retained_intron		14	-1	55660430	564
ENSMUSG00000024043	protein_coding	Arhgap28	ENSMUST00000163865	protein_coding	alternative2	17	-1	67901471	2037
ENSMUSG00000098311	lincRNA	Gm27191	ENSMUST00000145973	lincRNA		X	-1	150849378	448
ENSMUSG00000098051	lincRNA	Gm27032	ENSMUST00000183124	lincRNA		2	1	180894105	1116
ENSMUSG00000024043	protein_coding	Arhgap28	ENSMUST00000170813	nonsense_mediated_decay		17	-1	67873048	818
ENSMUSG00000115600	unitary_pseudogene	Gm49299	ENSMUST00000227568	unitary_pseudogene		14	-1	55658208	362
ENSMUSG00000097966	processed_pseudogene	Gm9423	ENSMUST00000183173	processed_pseudogene		3	1	158960446	997
ENSMUSG00000024043	protein_coding	Arhgap28	ENSMUST00000170581	protein_coding		17	-1	67896110	704
ENSMUSG00000106208	processed_pseudogene	Gm4734	ENSMUST00000200117	processed_pseudogene		9	1	109970433	777
ENSMUSG00000090955	processed_pseudogene	Gm17097	ENSMUST00000166414	processed_pseudogene		17	-1	67851063	714
ENSMUSG00000106053	lincRNA	Gm20752	ENSMUST00000197341	lincRNA		3	1	159076364	2833
ENSMUSG00000041429	protein_coding	Nthl1	ENSMUST00000234308	retained_intron		17	1	24632680	2084
ENSMUSG00000041429	protein_coding	Nthl1	ENSMUST00000234260	retained_intron		17	1	24632682	968
ENSMUSG00000104864	processed_pseudogene	Gm43655	ENSMUST00000197367	processed_pseudogene		3	1	159491418	222
ENSMUSG00000062564	protein_coding	Tex28	ENSMUST00000114328	protein_coding	principal1	X	-1	74167838	1421
ENSMUSG00000062564	protein_coding	Tex28	ENSMUST00000078060	protein_coding	principal1	X	-1	74167838	1420
ENSMUSG00000050549	protein_coding	Fam241a	ENSMUST00000199273	protein_coding	principal1	3	-1	127896324	2234
ENSMUSG00000084131	processed_pseudogene	Rpl3-ps2	ENSMUST00000117131	processed_pseudogene		X	1	74170653	1214
ENSMUSG00000041429	protein_coding	Nthl1	ENSMUST00000047611	protein_coding	principal1	17	1	24632682	1079
ENSMUSG00000050549	protein_coding	Fam241a	ENSMUST00000057198	protein_coding		3	-1	127896288	1607
ENSMUSG00000041429	protein_coding	Nthl1	ENSMUST00000234635	processed_transcript		17	1	24632719	893
ENSMUSG00000041429	protein_coding	Nthl1	ENSMUST00000234888	retained_intron		17	1	24638176	583
ENSMUSG00000002664	protein_coding	Pspn	ENSMUST00000002740	protein_coding	principal1	17	-1	57000018	474
ENSMUSG00000028186	protein_coding	Uox	ENSMUST00000199489	protein_coding		3	1	146570426	864
ENSMUSG00000081911	processed_pseudogene	Mrps36-ps2	ENSMUST00000118658	processed_pseudogene		7	-1	105690567	309
ENSMUSG00000028186	protein_coding	Uox	ENSMUST00000029837	protein_coding	principal1	3	1	146597077	2737
ENSMUSG00000028186	protein_coding	Uox	ENSMUST00000147409	protein_coding		3	1	146597148	639
ENSMUSG00000028186	protein_coding	Uox	ENSMUST00000121133	protein_coding		3	1	146597165	768
ENSMUSG00000028186	protein_coding	Uox	ENSMUST00000138921	retained_intron		3	1	146597166	448
ENSMUSG00000028186	protein_coding	Uox	ENSMUST00000197320	retained_intron		3	1	146609985	2364
ENSMUSG00000015217	protein_coding	Hmgb3	ENSMUST00000072699	protein_coding	principal1	X	1	71555918	1571
ENSMUSG00000110234	protein_coding	Gm45799	ENSMUST00000106785	protein_coding	alternative2	7	1	105640552	367
ENSMUSG00000047539	protein_coding	Fbxo28	ENSMUST00000051431	protein_coding	principal1	1	-1	182341618	4925
ENSMUSG00000015217	protein_coding	Hmgb3	ENSMUST00000015361	protein_coding	principal1	X	1	71555941	1544
ENSMUSG00000047539	protein_coding	Fbxo28	ENSMUST00000193700	retained_intron		1	-1	182318387	2676
ENSMUSG00000015217	protein_coding	Hmgb3	ENSMUST00000114582	protein_coding	principal1	X	1	71555928	1743
ENSMUSG00000047539	protein_coding	Fbxo28	ENSMUST00000192544	nonsense_mediated_decay		1	-1	182341600	1407
ENSMUSG00000015217	protein_coding	Hmgb3	ENSMUST00000088874	protein_coding	principal1	X	1	71555990	1728
ENSMUSG00000047539	protein_coding	Fbxo28	ENSMUST00000195061	nonsense_mediated_decay		1	-1	182341571	781
ENSMUSG00000015217	protein_coding	Hmgb3	ENSMUST00000123100	protein_coding		X	1	71556946	634
ENSMUSG00000047539	protein_coding	Fbxo28	ENSMUST00000194213	nonsense_mediated_decay		1	-1	182341629	747
ENSMUSG00000015217	protein_coding	Hmgb3	ENSMUST00000132145	retained_intron		X	1	71557783	847
ENSMUSG00000110234	protein_coding	Gm45799	ENSMUST00000142363	nonsense_mediated_decay		7	1	105640562	1972
ENSMUSG00000110234	protein_coding	Gm45799	ENSMUST00000142874	nonsense_mediated_decay		7	1	105640562	3795
ENSMUSG00000110234	protein_coding	Gm45799	ENSMUST00000149819	nonsense_mediated_decay		7	1	105640564	638
ENSMUSG00000079519	protein_coding	Gm14743	ENSMUST00000114026	protein_coding	principal1	X	-1	78245921	759
ENSMUSG00000110234	protein_coding	Gm45799	ENSMUST00000106786	protein_coding	alternative2	7	1	105640570	409
ENSMUSG00000110234	protein_coding	Gm45799	ENSMUST00000211054	protein_coding	principal2	7	1	105640577	490
ENSMUSG00000110234	protein_coding	Gm45799	ENSMUST00000210893	protein_coding		7	1	105641020	459
ENSMUSG00000104763	lincRNA	9830132P13Rik	ENSMUST00000198240	lincRNA		3	1	127916172	4187
ENSMUSG00000110234	protein_coding	Gm45799	ENSMUST00000210312	nonsense_mediated_decay		7	1	105641183	762
ENSMUSG00000106437	lincRNA	Gm35667	ENSMUST00000199122	lincRNA		3	1	127970709	711
ENSMUSG00000083448	processed_pseudogene	Gm8749	ENSMUST00000117737	processed_pseudogene		X	-1	78358124	331
ENSMUSG00000036557	protein_coding	Stpg4	ENSMUST00000040609	protein_coding	principal2	17	-1	87427741	847
ENSMUSG00000036557	protein_coding	Stpg4	ENSMUST00000187078	protein_coding	alternative2	17	-1	87427687	668
ENSMUSG00000074237	TEC	Gm10650	ENSMUST00000196581	TEC		3	1	128038693	1969
ENSMUSG00000036557	protein_coding	Stpg4	ENSMUST00000186211	protein_coding	alternative2	17	-1	87427708	591
ENSMUSG00000074237	TEC	Gm10650	ENSMUST00000098625	TEC		3	1	128038694	1968
ENSMUSG00000036557	protein_coding	Stpg4	ENSMUST00000189157	processed_transcript		17	-1	87427635	617
ENSMUSG00000036557	protein_coding	Stpg4	ENSMUST00000189487	processed_transcript		17	-1	87427635	701
ENSMUSG00000030882	protein_coding	Dnhd1	ENSMUST00000145988	protein_coding	principal1	7	1	105650827	14536
ENSMUSG00000035651	protein_coding	4930480E11Rik	ENSMUST00000035626	protein_coding	principal1	X	1	78369643	1486
ENSMUSG00000030882	protein_coding	Dnhd1	ENSMUST00000128388	retained_intron		7	1	105673976	813
ENSMUSG00000083927	processed_pseudogene	Gm14749	ENSMUST00000121269	processed_pseudogene		X	1	78375313	333
ENSMUSG00000030882	protein_coding	Dnhd1	ENSMUST00000106776	protein_coding		7	1	105678024	1146
ENSMUSG00000027886	protein_coding	1700013F07Rik	ENSMUST00000138375	processed_transcript		3	1	108534150	464
ENSMUSG00000084019	processed_pseudogene	Gm8754	ENSMUST00000118391	processed_pseudogene		X	1	78390705	520
ENSMUSG00000027886	protein_coding	1700013F07Rik	ENSMUST00000138210	processed_transcript		3	1	108537534	760
ENSMUSG00000056131	protein_coding	Pgm3	ENSMUST00000070064	protein_coding	principal1	9	-1	86571827	2666
ENSMUSG00000057054	protein_coding	Inca1	ENSMUST00000108542	protein_coding	principal3	11	-1	70700155	1080
ENSMUSG00000057054	protein_coding	Inca1	ENSMUST00000108541	protein_coding	principal3	11	-1	70700155	1150
ENSMUSG00000027886	protein_coding	1700013F07Rik	ENSMUST00000029485	protein_coding	principal1	3	1	108537541	661
ENSMUSG00000057054	protein_coding	Inca1	ENSMUST00000126114	protein_coding	principal3	11	-1	70700155	1189
ENSMUSG00000032911	protein_coding	Cspg4	ENSMUST00000214057	retained_intron		9	1	56865033	4976
ENSMUSG00000105816	processed_transcript	D030025E07Rik	ENSMUST00000197413	lincRNA		3	-1	128231603	2346
ENSMUSG00000057054	protein_coding	Inca1	ENSMUST00000073625	protein_coding	principal3	11	-1	70700155	1218
ENSMUSG00000103761	TEC	Gm37859	ENSMUST00000195529	TEC		3	-1	108534820	2173
ENSMUSG00000105816	processed_transcript	D030025E07Rik	ENSMUST00000198478	lincRNA		3	-1	128133360	418
ENSMUSG00000056131	protein_coding	Pgm3	ENSMUST00000072585	protein_coding		9	-1	86571828	1920
ENSMUSG00000105816	processed_transcript	D030025E07Rik	ENSMUST00000196895	retained_intron		3	-1	128231606	636
ENSMUSG00000057054	protein_coding	Inca1	ENSMUST00000108543	protein_coding	alternative2	11	-1	70700109	1255
ENSMUSG00000105816	processed_transcript	D030025E07Rik	ENSMUST00000196617	retained_intron		3	-1	128231553	1443
ENSMUSG00000056131	protein_coding	Pgm3	ENSMUST00000190924	retained_intron		9	-1	86557940	760
ENSMUSG00000105816	processed_transcript	D030025E07Rik	ENSMUST00000198275	lincRNA		3	-1	128231592	653
ENSMUSG00000007670	protein_coding	Khsrp	ENSMUST00000007814	protein_coding	principal2	17	-1	57031488	3978
ENSMUSG00000081881	processed_pseudogene	Gm14752	ENSMUST00000120719	processed_pseudogene		X	1	78405676	2075
ENSMUSG00000007670	protein_coding	Khsrp	ENSMUST00000233480	protein_coding	alternative2	17	-1	57031522	2698
ENSMUSG00000032911	protein_coding	Cspg4	ENSMUST00000035661	protein_coding	principal1	9	1	56865033	8121
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000106783	protein_coding	principal2	7	1	105640056	3273
ENSMUSG00000007670	protein_coding	Khsrp	ENSMUST00000232759	protein_coding		17	-1	57024862	806
ENSMUSG00000056131	protein_coding	Pgm3	ENSMUST00000186193	retained_intron		9	-1	86571793	2116
ENSMUSG00000032911	protein_coding	Cspg4	ENSMUST00000215666	retained_intron		9	1	56887976	5158
ENSMUSG00000082865	processed_pseudogene	Gm14745	ENSMUST00000118480	processed_pseudogene		X	1	78416198	1096
ENSMUSG00000056131	protein_coding	Pgm3	ENSMUST00000187251	retained_intron		9	-1	86571842	2460
ENSMUSG00000007670	protein_coding	Khsrp	ENSMUST00000233246	retained_intron		17	-1	57024060	757
ENSMUSG00000032911	protein_coding	Cspg4	ENSMUST00000217052	retained_intron		9	1	56896323	3267
ENSMUSG00000007670	protein_coding	Khsrp	ENSMUST00000232765	retained_intron		17	-1	57024171	593
ENSMUSG00000103731	TEC	Gm17530	ENSMUST00000194336	TEC		9	-1	86547153	472
ENSMUSG00000106119	processed_pseudogene	Gm43656	ENSMUST00000197882	processed_pseudogene		3	-1	128281091	434
ENSMUSG00000103731	TEC	Gm17530	ENSMUST00000194439	TEC		9	-1	86546795	114
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000058333	protein_coding	principal2	7	1	105640448	694
ENSMUSG00000000148	protein_coding	Brat1	ENSMUST00000041588	protein_coding	principal3	5	1	140705011	3333
ENSMUSG00000109739	protein_coding	Gm17949	ENSMUST00000210548	protein_coding	principal1	17	1	57011469	1179
ENSMUSG00000105527	lincRNA	4933424H11Rik	ENSMUST00000200511	lincRNA		3	-1	128701550	2018
ENSMUSG00000116445	bidirectional_promoter_lncRNA	Gm49481	ENSMUST00000229479	bidirectional_promoter_lncRNA		15	1	78396001	1184
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000210350	protein_coding	alternative2	7	1	105640551	529
ENSMUSG00000106029	transcribed_processed_pseudogene	Gm4410	ENSMUST00000199349	transcribed_processed_pseudogene		3	1	128839836	686
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000151193	protein_coding		7	1	105640564	1083
ENSMUSG00000106245	lincRNA	Gm43824	ENSMUST00000199042	lincRNA		3	1	128610987	2588
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000150479	nonsense_mediated_decay		7	1	105640567	556
ENSMUSG00000000148	protein_coding	Brat1	ENSMUST00000153440	nonsense_mediated_decay		5	1	140705023	3023
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000209588	protein_coding		7	1	105640571	373
ENSMUSG00000097260	processed_pseudogene	Gm5706	ENSMUST00000181525	processed_pseudogene		1	-1	182393535	993
ENSMUSG00000042406	protein_coding	Atf4	ENSMUST00000109605	protein_coding	principal1	15	1	80255184	1725
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000106780	protein_coding	principal2	7	1	105640571	671
ENSMUSG00000044986	protein_coding	Tst	ENSMUST00000058659	protein_coding	principal1	15	-1	78405907	1144
ENSMUSG00000042406	protein_coding	Atf4	ENSMUST00000229828	protein_coding		15	1	80255185	659
ENSMUSG00000000148	protein_coding	Brat1	ENSMUST00000110806	protein_coding	alternative2	5	1	140705023	3854
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000140577	nonsense_mediated_decay		7	1	105640589	629
ENSMUSG00000044986	protein_coding	Tst	ENSMUST00000231525	retained_intron		15	-1	78405852	2633
ENSMUSG00000042406	protein_coding	Atf4	ENSMUST00000230434	retained_intron		15	1	80255523	2019
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000106784	protein_coding		7	1	105640590	494
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000140385	retained_intron		7	1	105640671	444
ENSMUSG00000000148	protein_coding	Brat1	ENSMUST00000131905	retained_intron		5	1	140705050	2185
ENSMUSG00000089847	protein_coding	Timm10b	ENSMUST00000209445	protein_coding		7	1	105641117	371
ENSMUSG00000000148	protein_coding	Brat1	ENSMUST00000124892	retained_intron		5	1	140705052	3179
ENSMUSG00000000148	protein_coding	Brat1	ENSMUST00000100505	protein_coding	alternative2	5	1	140705066	3431
ENSMUSG00000040412	protein_coding	5330417C22Rik	ENSMUST00000106625	protein_coding	principal1	3	-1	108536536	5836
ENSMUSG00000040412	protein_coding	5330417C22Rik	ENSMUST00000185128	nonsense_mediated_decay		3	-1	108536522	3326
ENSMUSG00000040412	protein_coding	5330417C22Rik	ENSMUST00000140357	processed_transcript		3	-1	108464964	539
ENSMUSG00000047996	protein_coding	Prrg1	ENSMUST00000114025	protein_coding	principal1	X	-1	78583891	3964
ENSMUSG00000040412	protein_coding	5330417C22Rik	ENSMUST00000148493	retained_intron		3	-1	108470081	579
ENSMUSG00000022014	protein_coding	Epsti1	ENSMUST00000022591	protein_coding	principal2	14	1	77904239	1870
ENSMUSG00000040412	protein_coding	5330417C22Rik	ENSMUST00000148237	retained_intron		3	-1	108536459	352
ENSMUSG00000040412	protein_coding	5330417C22Rik	ENSMUST00000048012	protein_coding		3	-1	108536517	3321
ENSMUSG00000047996	protein_coding	Prrg1	ENSMUST00000148345	retained_intron		X	-1	78583891	3725
ENSMUSG00000022014	protein_coding	Epsti1	ENSMUST00000227903	protein_coding	alternative2	14	1	77904407	1178
ENSMUSG00000022014	protein_coding	Epsti1	ENSMUST00000169978	protein_coding	alternative2	14	1	77904407	1175
ENSMUSG00000047996	protein_coding	Prrg1	ENSMUST00000126994	retained_intron		X	-1	78583782	2040
ENSMUSG00000115517	lincRNA	Gm48954	ENSMUST00000226503	lincRNA		14	1	78019728	1412
ENSMUSG00000047996	protein_coding	Prrg1	ENSMUST00000156427	retained_intron		X	-1	78583896	3361
ENSMUSG00000111241	unprocessed_pseudogene	Gm19121	ENSMUST00000215720	unprocessed_pseudogene		9	1	44955715	1022
ENSMUSG00000047996	protein_coding	Prrg1	ENSMUST00000126209	processed_transcript		X	-1	78583855	1217
ENSMUSG00000047996	protein_coding	Prrg1	ENSMUST00000132852	retained_intron		X	-1	78583890	691
ENSMUSG00000047996	protein_coding	Prrg1	ENSMUST00000134602	protein_coding		X	-1	78583894	368
ENSMUSG00000047996	protein_coding	Prrg1	ENSMUST00000137011	processed_transcript		X	-1	78583852	314
ENSMUSG00000047996	protein_coding	Prrg1	ENSMUST00000177904	protein_coding	principal1	X	-1	78583782	3851
ENSMUSG00000047996	protein_coding	Prrg1	ENSMUST00000114024	protein_coding	principal1	X	-1	78583896	3900
ENSMUSG00000045655	protein_coding	Fam216b	ENSMUST00000066437	protein_coding	principal1	14	-1	78089007	2241
ENSMUSG00000073482	TEC	Gm10517	ENSMUST00000192970	TEC		1	-1	182409021	758
ENSMUSG00000027776	protein_coding	Il12a	ENSMUST00000107816	protein_coding	principal2	3	1	68691424	1268
ENSMUSG00000073482	TEC	Gm10517	ENSMUST00000097444	TEC		1	-1	182409020	402
ENSMUSG00000036438	protein_coding	Calm2	ENSMUST00000040440	protein_coding	principal1	17	-1	87446935	1205
ENSMUSG00000045655	protein_coding	Fam216b	ENSMUST00000118785	protein_coding		14	-1	78088999	1447
ENSMUSG00000084125	processed_pseudogene	Gm8757	ENSMUST00000119660	processed_pseudogene		X	1	78624706	372
ENSMUSG00000036438	protein_coding	Calm2	ENSMUST00000234406	protein_coding		17	-1	87446856	842
ENSMUSG00000045655	protein_coding	Fam216b	ENSMUST00000173826	nonsense_mediated_decay		14	-1	78088981	575
ENSMUSG00000115519	processed_pseudogene	Gm48955	ENSMUST00000226668	processed_pseudogene		14	-1	78072990	219
ENSMUSG00000027776	protein_coding	Il12a	ENSMUST00000195408	retained_intron		3	1	68691527	786
ENSMUSG00000036438	protein_coding	Calm2	ENSMUST00000143965	retained_intron		17	-1	87446848	890
ENSMUSG00000074236	processed_pseudogene	Gm9387	ENSMUST00000098624	processed_pseudogene		3	-1	128955098	1320
ENSMUSG00000092272	lincRNA	Gm19301	ENSMUST00000174283	lincRNA		14	1	78070717	2210
ENSMUSG00000036438	protein_coding	Calm2	ENSMUST00000150137	retained_intron		17	-1	87446849	657
ENSMUSG00000027776	protein_coding	Il12a	ENSMUST00000191910	retained_intron		3	1	68693993	639
ENSMUSG00000036438	protein_coding	Calm2	ENSMUST00000238271	nonsense_mediated_decay		17	-1	87446935	403
ENSMUSG00000027776	protein_coding	Il12a	ENSMUST00000192812	retained_intron		3	1	68694021	1296
ENSMUSG00000099640	lincRNA	Gm28543	ENSMUST00000188986	lincRNA		3	-1	129070544	509
ENSMUSG00000027776	protein_coding	Il12a	ENSMUST00000195517	retained_intron		3	1	68694021	1298
ENSMUSG00000082664	processed_pseudogene	Gm8761	ENSMUST00000121507	processed_pseudogene		X	-1	78656739	955
ENSMUSG00000027776	protein_coding	Il12a	ENSMUST00000029345	protein_coding	alternative2	3	1	68690644	1303
ENSMUSG00000117208	lincRNA	Gm49945	ENSMUST00000233735	lincRNA		17	-1	68114386	166
ENSMUSG00000117243	lincRNA	Gm49944	ENSMUST00000232839	lincRNA		17	-1	68173556	551
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000131446	protein_coding	principal2	7	-1	105640416	3275
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000142173	retained_intron		7	-1	105639914	4448
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000084782	protein_coding	principal2	7	-1	105640351	2254
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000033171	nonsense_mediated_decay		7	-1	105640314	1772
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000127853	processed_transcript		7	-1	105637902	1354
ENSMUSG00000112612	processed_pseudogene	Gm7775	ENSMUST00000218871	processed_pseudogene		10	1	77137100	853
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000137931	nonsense_mediated_decay		7	-1	105640337	1582
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000209870	nonsense_mediated_decay		7	-1	105639028	877
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000190957	protein_coding	principal1	9	1	86467154	9187
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000209550	protein_coding	alternative1	7	-1	105640316	1141
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000210911	protein_coding		7	-1	105640326	938
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000134613	processed_transcript		7	-1	105638045	469
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000126589	processed_transcript		7	-1	105637915	286
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000133519	protein_coding		7	-1	105640308	839
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000157028	nonsense_mediated_decay		7	-1	105640335	725
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000186290	retained_intron		9	1	86467170	2437
ENSMUSG00000030881	protein_coding	Arfip2	ENSMUST00000127759	retained_intron		7	-1	105640340	756
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000190906	retained_intron		9	1	86467179	1232
ENSMUSG00000027540	protein_coding	Ptpn1	ENSMUST00000029053	protein_coding	principal1	2	1	167932327	4213
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000187607	retained_intron		9	1	86467211	3443
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000188675	protein_coding		9	1	86467211	2295
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000185919	nonsense_mediated_decay		9	1	86467214	8890
ENSMUSG00000038848	protein_coding	Ythdf1	ENSMUST00000037299	protein_coding	principal1	2	-1	180920949	3184
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000190407	retained_intron		9	1	86487264	664
ENSMUSG00000038848	protein_coding	Ythdf1	ENSMUST00000108876	protein_coding		2	-1	180920949	2272
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000186841	retained_intron		9	1	86489598	670
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000190834	retained_intron		9	1	86497030	3971
ENSMUSG00000038848	protein_coding	Ythdf1	ENSMUST00000124666	protein_coding		2	-1	180920387	596
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000185840	retained_intron		9	1	86503644	967
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000186418	retained_intron		9	1	86503936	2746
ENSMUSG00000115552	processed_pseudogene	Gm48959	ENSMUST00000228898	processed_pseudogene		14	1	78199373	397
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000185297	protein_coding		9	1	86521141	1653
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000187348	retained_intron		9	1	86523492	3018
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000189564	retained_intron		9	1	86531577	2164
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000189817	nonsense_mediated_decay		9	1	86533003	1765
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000186715	retained_intron		9	1	86542821	733
ENSMUSG00000038840	protein_coding	Birc7	ENSMUST00000137859	retained_intron		2	1	180929023	1529
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000187427	retained_intron		9	1	86549617	1296
ENSMUSG00000116505	antisense	Gm10865	ENSMUST00000230425	antisense		15	-1	79011041	712
ENSMUSG00000034973	protein_coding	Dop1a	ENSMUST00000034987	protein_coding	principal1	9	1	86485407	8933
ENSMUSG00000038840	protein_coding	Birc7	ENSMUST00000108875	protein_coding	principal1	2	1	180929023	1178
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000107176	protein_coding		11	-1	101785371	2377
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000017868	protein_coding	alternative1	11	-1	101785371	2395
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000132040	processed_transcript		11	-1	101772181	882
ENSMUSG00000027540	protein_coding	Ptpn1	ENSMUST00000126839	processed_transcript		2	1	167932372	4292
ENSMUSG00000027540	protein_coding	Ptpn1	ENSMUST00000124039	processed_transcript		2	1	167932395	517
ENSMUSG00000027540	protein_coding	Ptpn1	ENSMUST00000144249	processed_transcript		2	1	167932395	682
ENSMUSG00000027540	protein_coding	Ptpn1	ENSMUST00000142717	processed_transcript		2	1	167951048	549
ENSMUSG00000027540	protein_coding	Ptpn1	ENSMUST00000147210	processed_transcript		2	1	167932057	921
ENSMUSG00000027540	protein_coding	Ptpn1	ENSMUST00000151705	processed_transcript		2	1	167932372	466
ENSMUSG00000032417	protein_coding	Rwdd2a	ENSMUST00000185566	protein_coding	principal1	9	1	86571991	1054
ENSMUSG00000022015	protein_coding	Tnfsf11	ENSMUST00000022592	protein_coding	principal1	14	-1	78308043	2236
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000054080	protein_coding	principal1	6	-1	148946467	2697
ENSMUSG00000032417	protein_coding	Rwdd2a	ENSMUST00000034988	protein_coding	principal1	9	1	86572016	1355
ENSMUSG00000115450	processed_pseudogene	Gm4821	ENSMUST00000227356	processed_pseudogene		14	1	78461292	527
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000203164	protein_coding		6	-1	148933149	2442
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000204435	protein_coding	principal1	6	-1	148943535	2785
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000081956	protein_coding	principal1	6	-1	148944826	2737
ENSMUSG00000032417	protein_coding	Rwdd2a	ENSMUST00000179212	protein_coding	principal1	9	1	86572053	1130
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000111562	protein_coding	principal1	6	-1	148944812	906
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000204119	nonsense_mediated_decay		6	-1	148946410	571
ENSMUSG00000022075	protein_coding	Rhobtb2	ENSMUST00000022665	protein_coding	principal1	14	-1	69805636	5322
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000204590	nonsense_mediated_decay		6	-1	148944723	526
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000132696	protein_coding		6	-1	148946155	596
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000139355	protein_coding		6	-1	148946356	626
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000146457	protein_coding		6	-1	148946415	393
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000143963	retained_intron		6	-1	148946390	745
ENSMUSG00000039985	protein_coding	Sinhcaf	ENSMUST00000127063	processed_transcript		6	-1	148946443	202
ENSMUSG00000022075	protein_coding	Rhobtb2	ENSMUST00000224535	processed_transcript		14	-1	69800822	1905
ENSMUSG00000022075	protein_coding	Rhobtb2	ENSMUST00000223603	retained_intron		14	-1	69805526	5782
ENSMUSG00000085355	antisense	3010003L21Rik	ENSMUST00000154673	antisense		6	1	148944867	1747
ENSMUSG00000022075	protein_coding	Rhobtb2	ENSMUST00000225088	retained_intron		14	-1	69805225	2986
ENSMUSG00000085355	antisense	3010003L21Rik	ENSMUST00000047953	antisense		6	1	148944867	1729
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000140228	protein_coding		15	1	78947724	3807
ENSMUSG00000110888	lincRNA	Gm47237	ENSMUST00000213195	lincRNA		9	1	56903461	1536
ENSMUSG00000087373	lincRNA	Gm15892	ENSMUST00000156149	lincRNA		11	1	88059066	1001
ENSMUSG00000087373	lincRNA	Gm15892	ENSMUST00000153213	lincRNA		11	1	88066358	478
ENSMUSG00000087373	lincRNA	Gm15892	ENSMUST00000152627	lincRNA		11	1	88066418	439
ENSMUSG00000048652	protein_coding	Samd13	ENSMUST00000125965	protein_coding	principal1	3	-1	146685592	1590
ENSMUSG00000048652	protein_coding	Samd13	ENSMUST00000124931	protein_coding	principal1	3	-1	146682410	905
ENSMUSG00000048652	protein_coding	Samd13	ENSMUST00000147113	protein_coding	principal1	3	-1	146682522	729
ENSMUSG00000048652	protein_coding	Samd13	ENSMUST00000197989	protein_coding		3	-1	146685475	591
ENSMUSG00000048652	protein_coding	Samd13	ENSMUST00000144837	retained_intron		3	-1	146685471	642
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000086216	protein_coding	principal3	5	-1	122821339	2760
ENSMUSG00000061882	protein_coding	Ccdc62	ENSMUST00000094320	protein_coding	principal1	5	1	123930679	3924
ENSMUSG00000090202	protein_coding	4930503B20Rik	ENSMUST00000049703	protein_coding	principal2	3	-1	146651317	2080
ENSMUSG00000061882	protein_coding	Ccdc62	ENSMUST00000166983	retained_intron		5	1	123930689	622
ENSMUSG00000090202	protein_coding	4930503B20Rik	ENSMUST00000126930	processed_transcript		3	-1	146648306	368
ENSMUSG00000061882	protein_coding	Ccdc62	ENSMUST00000169898	processed_transcript		5	1	123946386	467
ENSMUSG00000090202	protein_coding	4930503B20Rik	ENSMUST00000149825	protein_coding	alternative2	3	-1	146651315	970
ENSMUSG00000061882	protein_coding	Ccdc62	ENSMUST00000171881	retained_intron		5	1	123954502	495
ENSMUSG00000061882	protein_coding	Ccdc62	ENSMUST00000197673	retained_intron		5	1	123962628	4470
ENSMUSG00000061882	protein_coding	Ccdc62	ENSMUST00000165148	protein_coding	principal1	5	1	123930689	3920
ENSMUSG00000085810	antisense	Gm16325	ENSMUST00000141199	antisense		3	1	146641932	3174
ENSMUSG00000085810	antisense	Gm16325	ENSMUST00000154128	antisense		3	1	146648609	244
ENSMUSG00000105875	protein_coding	Gm43518	ENSMUST00000166129	protein_coding	principal1	5	1	123927418	650
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000196423	nonsense_mediated_decay		5	-1	122821280	3376
ENSMUSG00000117545	lincRNA	Gm30794	ENSMUST00000234806	lincRNA		17	-1	87460364	1522
ENSMUSG00000117545	lincRNA	Gm30794	ENSMUST00000234358	lincRNA		17	-1	87459427	1128
ENSMUSG00000032418	protein_coding	Me1	ENSMUST00000034989	protein_coding	principal1	9	-1	86695953	3288
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000129160	processed_transcript		11	-1	101784861	857
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000131862	processed_transcript		11	-1	101785258	668
ENSMUSG00000032418	protein_coding	Me1	ENSMUST00000185374	protein_coding		9	-1	86687277	3292
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000129995	processed_transcript		11	-1	101784491	672
ENSMUSG00000117486	lincRNA	Gm30938	ENSMUST00000234254	lincRNA		17	-1	87473742	549
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000140970	processed_transcript		11	-1	101785222	606
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000196640	protein_coding	alternative2	5	-1	122821287	2422
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000131117	processed_transcript		11	-1	101784388	542
ENSMUSG00000032418	protein_coding	Me1	ENSMUST00000189968	processed_transcript		9	-1	86618704	1055
ENSMUSG00000032418	protein_coding	Me1	ENSMUST00000189847	processed_transcript		9	-1	86618737	254
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000149099	processed_transcript		11	-1	101785260	662
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000137179	processed_transcript		11	-1	101785310	654
ENSMUSG00000102259	TEC	Gm38230	ENSMUST00000193572	TEC		9	-1	86685208	1159
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000154512	processed_transcript		11	-1	101784848	400
ENSMUSG00000087466	antisense	A330041J22Rik	ENSMUST00000150367	antisense		9	1	86695460	1825
ENSMUSG00000032733	protein_coding	Snx33	ENSMUST00000050916	protein_coding	principal1	9	-1	56928371	4571
ENSMUSG00000017724	protein_coding	Etv4	ENSMUST00000164750	protein_coding	principal3	11	-1	101785310	2336
ENSMUSG00000104120	TEC	Gm37484	ENSMUST00000195378	TEC		9	1	86712004	2523
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000197719	protein_coding	alternative2	5	-1	122821287	2383
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000197074	protein_coding	alternative2	5	-1	122821280	2413
ENSMUSG00000100847	lincRNA	Gm28676	ENSMUST00000188990	lincRNA		17	1	87490748	591
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000199406	protein_coding	alternative2	5	-1	122821280	2413
ENSMUSG00000023106	protein_coding	Denr	ENSMUST00000023869	protein_coding	principal1	5	1	123907175	2339
ENSMUSG00000117361	lincRNA	Gm30984	ENSMUST00000234692	lincRNA		17	-1	87530744	423
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000200645	protein_coding	alternative2	5	-1	122821294	2404
ENSMUSG00000023106	protein_coding	Denr	ENSMUST00000168899	processed_transcript		5	1	123907269	338
ENSMUSG00000117414	lincRNA	Gm46587	ENSMUST00000234992	lincRNA		17	-1	87571654	1551
ENSMUSG00000023106	protein_coding	Denr	ENSMUST00000198321	retained_intron		5	1	123907275	3962
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000199130	nonsense_mediated_decay		5	-1	122793529	687
ENSMUSG00000023106	protein_coding	Denr	ENSMUST00000171639	retained_intron		5	1	123907282	474
ENSMUSG00000033491	protein_coding	Prss35	ENSMUST00000036426	protein_coding	principal1	9	1	86743649	3444
ENSMUSG00000023106	protein_coding	Denr	ENSMUST00000166233	protein_coding		5	1	123907489	771
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000199025	retained_intron		5	-1	122799730	895
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000199191	protein_coding		5	-1	122794481	135
ENSMUSG00000110930	processed_pseudogene	Gm19936	ENSMUST00000216414	processed_pseudogene		9	-1	56933268	838
ENSMUSG00000033491	protein_coding	Prss35	ENSMUST00000179574	protein_coding	principal1	9	1	86743649	3211
ENSMUSG00000111629	lincRNA	4930442G15Rik	ENSMUST00000213112	lincRNA		9	1	56931631	1000
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000196753	retained_intron		5	-1	122802466	799
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000200148	nonsense_mediated_decay		5	-1	122807343	548
ENSMUSG00000045394	protein_coding	Epcam	ENSMUST00000235125	protein_coding		17	1	87635979	600
ENSMUSG00000045394	protein_coding	Epcam	ENSMUST00000234009	protein_coding		17	1	87635995	904
ENSMUSG00000045394	protein_coding	Epcam	ENSMUST00000234354	processed_transcript		17	1	87636017	581
ENSMUSG00000018377	protein_coding	Vezf1	ENSMUST00000018521	protein_coding	principal1	11	1	88068279	4583
ENSMUSG00000018377	protein_coding	Vezf1	ENSMUST00000143052	protein_coding		11	1	88073588	3915
ENSMUSG00000045394	protein_coding	Epcam	ENSMUST00000234623	protein_coding	principal1	17	1	87636682	1745
ENSMUSG00000045394	protein_coding	Epcam	ENSMUST00000053577	protein_coding	principal1	17	1	87635979	2040
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000200415	processed_transcript		5	-1	122818583	905
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000200219	retained_intron		5	-1	122806351	817
ENSMUSG00000114446	antisense	Gm33524	ENSMUST00000224990	antisense		14	-1	70057367	816
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000197554	retained_intron		5	-1	122821279	3057
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000200058	retained_intron		5	-1	122821018	1174
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000117506	protein_coding		9	-1	44965578	6039
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000199926	nonsense_mediated_decay		5	-1	122821270	695
ENSMUSG00000052430	protein_coding	Bmpr1b	ENSMUST00000029948	protein_coding	principal1	3	-1	141982264	5349
ENSMUSG00000022085	protein_coding	Pebp4	ENSMUST00000022678	protein_coding	principal1	14	1	69840420	1079
ENSMUSG00000029472	protein_coding	Anapc5	ENSMUST00000197331	processed_transcript		5	-1	122821275	752
ENSMUSG00000052430	protein_coding	Bmpr1b	ENSMUST00000131273	nonsense_mediated_decay		3	-1	141931508	2066
ENSMUSG00000052430	protein_coding	Bmpr1b	ENSMUST00000106232	protein_coding	principal1	3	-1	141931523	4164
ENSMUSG00000091672	processed_pseudogene	Gm17129	ENSMUST00000168168	processed_pseudogene		14	-1	3978930	505
ENSMUSG00000032288	protein_coding	Imp3	ENSMUST00000034827	protein_coding	principal1	9	1	56937475	924
ENSMUSG00000109596	unprocessed_pseudogene	Olfr565-ps1	ENSMUST00000209824	unprocessed_pseudogene		7	-1	102818495	944
ENSMUSG00000052430	protein_coding	Bmpr1b	ENSMUST00000106230	protein_coding	principal1	3	-1	142169425	2147
ENSMUSG00000052430	protein_coding	Bmpr1b	ENSMUST00000098568	protein_coding	principal1	3	-1	142169213	1910
ENSMUSG00000095686	protein_coding	Gm3099	ENSMUST00000112787	protein_coding	principal5	14	1	3998394	2065
ENSMUSG00000001435	protein_coding	Col18a1	ENSMUST00000081654	protein_coding		10	-1	77166548	5063
ENSMUSG00000095686	protein_coding	Gm3099	ENSMUST00000178274	protein_coding	alternative2	14	1	3998476	618
ENSMUSG00000112536	processed_pseudogene	Gm48195	ENSMUST00000218613	processed_pseudogene		10	1	87688578	452
ENSMUSG00000103091	TEC	Gm37555	ENSMUST00000195711	TEC		17	-1	79825414	542
ENSMUSG00000117394	lincRNA	1700106O07Rik	ENSMUST00000234236	lincRNA		17	1	79811713	439
ENSMUSG00000001435	protein_coding	Col18a1	ENSMUST00000105409	protein_coding	principal2	10	-1	77113705	4791
ENSMUSG00000001435	protein_coding	Col18a1	ENSMUST00000072755	protein_coding	alternative2	10	-1	77113946	5595
ENSMUSG00000060888	protein_coding	Olfr566	ENSMUST00000213481	protein_coding	alternative1	7	-1	102858755	2040
ENSMUSG00000001435	protein_coding	Col18a1	ENSMUST00000218407	protein_coding		10	-1	77059997	675
ENSMUSG00000060888	protein_coding	Olfr566	ENSMUST00000209952	protein_coding	alternative1	7	-1	102858765	1066
ENSMUSG00000001435	protein_coding	Col18a1	ENSMUST00000156009	protein_coding		10	-1	77089428	717
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000117549	protein_coding	principal1	9	-1	44965600	3415
ENSMUSG00000060888	protein_coding	Olfr566	ENSMUST00000071393	protein_coding	principal2	7	-1	102857271	951
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000145657	nonsense_mediated_decay		9	-1	44965525	3486
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000154287	nonsense_mediated_decay		9	-1	44965549	3048
ENSMUSG00000027661	protein_coding	Slc2a10	ENSMUST00000029196	protein_coding	principal1	2	1	165503787	3544
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000138559	protein_coding		9	-1	44965578	3374
ENSMUSG00000027661	protein_coding	Slc2a10	ENSMUST00000148463	processed_transcript		2	1	165508781	378
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000213193	protein_coding		9	-1	44965560	746
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000213890	protein_coding		9	-1	44965552	807
ENSMUSG00000087543	bidirectional_promoter_lncRNA	Gm16576	ENSMUST00000128342	bidirectional_promoter_lncRNA		15	1	79742698	5404
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000214761	protein_coding		9	-1	44965538	615
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000125642	protein_coding		9	-1	44965554	482
ENSMUSG00000001436	protein_coding	Slc19a1	ENSMUST00000136150	protein_coding		10	1	77032241	826
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000213666	protein_coding		9	-1	44965549	368
ENSMUSG00000001436	protein_coding	Slc19a1	ENSMUST00000133059	protein_coding		10	1	77032271	391
ENSMUSG00000114453	processed_pseudogene	Gm17805	ENSMUST00000225784	processed_pseudogene		14	1	12618668	574
ENSMUSG00000059890	protein_coding	Ube4a	ENSMUST00000155400	processed_transcript		9	-1	44965543	759
ENSMUSG00000114626	TEC	Gm48266	ENSMUST00000225480	TEC		14	-1	12770550	1143
ENSMUSG00000114624	TEC	Gm48267	ENSMUST00000225907	TEC		14	-1	12402230	1533
ENSMUSG00000114312	processed_pseudogene	Gm18077	ENSMUST00000224775	processed_pseudogene		14	1	12653337	489
ENSMUSG00000041986	protein_coding	Elmod1	ENSMUST00000215313	processed_transcript		9	-1	53975126	2268
ENSMUSG00000114230	antisense	Gm48239	ENSMUST00000223597	antisense		14	1	12374585	3551
ENSMUSG00000029503	protein_coding	P2rx2	ENSMUST00000112478	protein_coding	alternative2	5	-1	110342955	1632
ENSMUSG00000029503	protein_coding	P2rx2	ENSMUST00000200037	protein_coding	alternative2	5	-1	110342955	1569
ENSMUSG00000058934	antisense	Igf1os	ENSMUST00000139652	antisense		10	-1	87828362	497
ENSMUSG00000058934	antisense	Igf1os	ENSMUST00000146581	antisense		10	-1	87863381	2595
ENSMUSG00000028175	protein_coding	Depdc1a	ENSMUST00000120272	protein_coding		3	1	159495433	3323
ENSMUSG00000028175	protein_coding	Depdc1a	ENSMUST00000029825	protein_coding		3	1	159495451	2920
ENSMUSG00000031226	protein_coding	Pbdc1	ENSMUST00000033577	protein_coding	principal1	X	1	105079756	2638
ENSMUSG00000029503	protein_coding	P2rx2	ENSMUST00000195985	protein_coding	principal4	5	-1	110343212	2096
ENSMUSG00000001436	protein_coding	Slc19a1	ENSMUST00000144234	protein_coding	principal2	10	1	77032684	2309
ENSMUSG00000031226	protein_coding	Pbdc1	ENSMUST00000125343	retained_intron		X	1	105079775	3276
ENSMUSG00000028175	protein_coding	Depdc1a	ENSMUST00000106041	protein_coding	principal1	3	1	159495458	1971
ENSMUSG00000029503	protein_coding	P2rx2	ENSMUST00000058016	protein_coding	alternative2	5	-1	110342976	1895
ENSMUSG00000031397	protein_coding	Tktl1	ENSMUST00000010127	protein_coding	principal1	X	1	74177259	2473
ENSMUSG00000031226	protein_coding	Pbdc1	ENSMUST00000119477	protein_coding		X	1	105079761	1239
ENSMUSG00000031397	protein_coding	Tktl1	ENSMUST00000156959	nonsense_mediated_decay		X	1	74177290	496
ENSMUSG00000001436	protein_coding	Slc19a1	ENSMUST00000105410	protein_coding	principal2	10	1	77033212	2347
ENSMUSG00000029503	protein_coding	P2rx2	ENSMUST00000199165	retained_intron		5	-1	110343149	2010
ENSMUSG00000041986	protein_coding	Elmod1	ENSMUST00000048409	protein_coding	principal2	9	-1	53975301	2605
ENSMUSG00000029503	protein_coding	P2rx2	ENSMUST00000200214	protein_coding		5	-1	110343149	1568
ENSMUSG00000041986	protein_coding	Elmod1	ENSMUST00000216880	retained_intron		9	-1	53927026	1319
ENSMUSG00000001436	protein_coding	Slc19a1	ENSMUST00000136925	protein_coding	alternative2	10	1	77033268	2863
ENSMUSG00000041986	protein_coding	Elmod1	ENSMUST00000213111	retained_intron		9	-1	53975065	729
ENSMUSG00000041986	protein_coding	Elmod1	ENSMUST00000166580	protein_coding	alternative1	9	-1	53936834	2243
ENSMUSG00000001436	protein_coding	Slc19a1	ENSMUST00000130703	protein_coding		10	1	77033281	356
ENSMUSG00000117561	lincRNA	Gm49985	ENSMUST00000234471	lincRNA		17	1	79825859	339
ENSMUSG00000001436	protein_coding	Slc19a1	ENSMUST00000132984	protein_coding		10	1	77033319	877
ENSMUSG00000001436	protein_coding	Slc19a1	ENSMUST00000127249	retained_intron		10	1	77042500	613
ENSMUSG00000001436	protein_coding	Slc19a1	ENSMUST00000131031	protein_coding		10	1	77042791	685
ENSMUSG00000051518	protein_coding	Rps19bp1	ENSMUST00000052499	protein_coding	principal1	15	-1	80264315	838
ENSMUSG00000051518	protein_coding	Rps19bp1	ENSMUST00000230189	nonsense_mediated_decay		15	-1	80264246	525
ENSMUSG00000051518	protein_coding	Rps19bp1	ENSMUST00000229962	retained_intron		15	-1	80264284	465
ENSMUSG00000038763	protein_coding	Alpk3	ENSMUST00000107348	protein_coding	principal1	7	1	81057600	6369
ENSMUSG00000038763	protein_coding	Alpk3	ENSMUST00000151115	retained_intron		7	1	81094831	460
ENSMUSG00000033730	protein_coding	Egr3	ENSMUST00000035908	protein_coding	alternative1	14	1	70077203	1509
ENSMUSG00000080985	processed_pseudogene	Gm13559	ENSMUST00000120476	processed_pseudogene		2	1	58740639	863
ENSMUSG00000085194	sense_intronic	Platr32	ENSMUST00000148597	sense_intronic		7	1	81059113	394
ENSMUSG00000086129	sense_intronic	Gm13558	ENSMUST00000140464	sense_intronic		2	1	58705769	554
ENSMUSG00000033730	protein_coding	Egr3	ENSMUST00000225200	protein_coding	principal2	14	1	70077314	3940
ENSMUSG00000026839	protein_coding	Upp2	ENSMUST00000135737	processed_transcript		2	1	58567298	2848
ENSMUSG00000033730	protein_coding	Egr3	ENSMUST00000223809	processed_transcript		14	1	70077795	489
ENSMUSG00000033730	protein_coding	Egr3	ENSMUST00000223747	retained_intron		14	1	70078739	3876
ENSMUSG00000026839	protein_coding	Upp2	ENSMUST00000137007	processed_transcript		2	1	58567318	690
ENSMUSG00000100796	lincRNA	Gm28163	ENSMUST00000187099	lincRNA		2	-1	165601787	325
ENSMUSG00000055334	protein_coding	Snupn	ENSMUST00000068856	protein_coding	principal1	9	1	56950878	1391
ENSMUSG00000020843	protein_coding	Timm22	ENSMUST00000120699	protein_coding		11	1	76406952	746
ENSMUSG00000105529	processed_pseudogene	Gm9480	ENSMUST00000198038	processed_pseudogene		3	1	146696219	616
ENSMUSG00000020843	protein_coding	Timm22	ENSMUST00000021203	protein_coding	principal1	11	1	76407143	2817
ENSMUSG00000020843	protein_coding	Timm22	ENSMUST00000152183	protein_coding		11	1	76407191	362
ENSMUSG00000020843	protein_coding	Timm22	ENSMUST00000164102	nonsense_mediated_decay		11	1	76407205	468
ENSMUSG00000031227	protein_coding	Magee1	ENSMUST00000033578	protein_coding	principal1	X	1	105120378	3550
ENSMUSG00000083820	processed_pseudogene	Ndufs6b	ENSMUST00000118488	processed_pseudogene		7	-1	81161744	348
ENSMUSG00000074284	antisense	Gm10658	ENSMUST00000128125	antisense		9	-1	57071807	1241
ENSMUSG00000074284	antisense	Gm10658	ENSMUST00000135527	antisense		9	-1	57071966	957
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000109689	protein_coding	alternative2	15	1	78947724	7187
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000109690	protein_coding	principal4	15	1	78947724	7327
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000229943	protein_coding		15	1	78947919	762
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000137934	retained_intron		15	1	78948245	2446
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000229270	protein_coding	alternative2	15	1	78974053	745
ENSMUSG00000020053	protein_coding	Igf1	ENSMUST00000122386	protein_coding	alternative1	10	1	87858265	1391
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000109687	protein_coding	alternative2	15	1	78983041	2570
ENSMUSG00000025726	protein_coding	Slc28a1	ENSMUST00000026820	protein_coding	principal1	7	1	81114799	2846
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000130663	protein_coding		15	1	78983077	1660
ENSMUSG00000032290	protein_coding	Ptpn9	ENSMUST00000034832	protein_coding	principal1	9	1	56994923	4101
ENSMUSG00000020053	protein_coding	Igf1	ENSMUST00000095360	protein_coding	alternative1	10	1	87859068	7052
ENSMUSG00000025726	protein_coding	Slc28a1	ENSMUST00000119083	protein_coding	principal1	7	1	81114850	2899
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000109688	retained_intron		15	1	78983106	3980
ENSMUSG00000032290	protein_coding	Ptpn9	ENSMUST00000213500	processed_transcript		9	1	56995096	701
ENSMUSG00000032290	protein_coding	Ptpn9	ENSMUST00000216034	protein_coding		9	1	57022232	434
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000144151	protein_coding		15	1	78983705	404
ENSMUSG00000032290	protein_coding	Ptpn9	ENSMUST00000215707	retained_intron		9	1	57059438	886
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000229535	retained_intron		15	1	79001982	676
ENSMUSG00000033088	protein_coding	Triobp	ENSMUST00000129922	retained_intron		15	1	79002182	480
ENSMUSG00000082245	processed_pseudogene	Gm6292	ENSMUST00000120712	processed_pseudogene		X	1	105140849	1095
ENSMUSG00000085610	processed_pseudogene	Gm14747	ENSMUST00000149888	processed_pseudogene		X	-1	78683188	984
ENSMUSG00000117193	lincRNA	Gm36252	ENSMUST00000233387	lincRNA		17	-1	68187736	1192
ENSMUSG00000026839	protein_coding	Upp2	ENSMUST00000071543	protein_coding		2	1	58567387	2150
ENSMUSG00000026839	protein_coding	Upp2	ENSMUST00000229829	processed_transcript		2	1	58583676	185
ENSMUSG00000026839	protein_coding	Upp2	ENSMUST00000230667	processed_transcript		2	1	58633081	381
ENSMUSG00000020053	protein_coding	Igf1	ENSMUST00000105300	protein_coding	principal3	10	1	87859258	1673
ENSMUSG00000026839	protein_coding	Upp2	ENSMUST00000059102	protein_coding		2	1	58754942	2498
ENSMUSG00000020053	protein_coding	Igf1	ENSMUST00000121952	protein_coding	alternative1	10	1	87859490	798
ENSMUSG00000014846	protein_coding	Tppp3	ENSMUST00000014990	protein_coding	principal1	8	-1	105471526	1127
ENSMUSG00000026839	protein_coding	Upp2	ENSMUST00000102755	protein_coding	principal1	2	1	58755180	1632
ENSMUSG00000020053	protein_coding	Igf1	ENSMUST00000126490	protein_coding		10	1	87859611	510
ENSMUSG00000026839	protein_coding	Upp2	ENSMUST00000230627	protein_coding		2	1	58755212	1386
ENSMUSG00000014846	protein_coding	Tppp3	ENSMUST00000177126	protein_coding	principal1	8	-1	105469410	1396
ENSMUSG00000026839	protein_coding	Upp2	ENSMUST00000229923	protein_coding		2	1	58755212	2280
ENSMUSG00000014846	protein_coding	Tppp3	ENSMUST00000176419	protein_coding	principal1	8	-1	105468662	719
ENSMUSG00000074577	protein_coding	Ripor3	ENSMUST00000123782	processed_transcript		2	-1	168010618	3499
ENSMUSG00000026839	protein_coding	Upp2	ENSMUST00000128864	processed_transcript		2	1	58765325	939
ENSMUSG00000020053	protein_coding	Igf1	ENSMUST00000062862	protein_coding		10	1	87860030	2292
ENSMUSG00000096230	protein_coding	Gm16429	ENSMUST00000201400	protein_coding	principal1	5	-1	93929052	1848
ENSMUSG00000020053	protein_coding	Igf1	ENSMUST00000121161	protein_coding	alternative1	10	1	87860606	1344
ENSMUSG00000096230	protein_coding	Gm16429	ENSMUST00000179824	protein_coding	principal1	5	-1	93927872	1446
ENSMUSG00000074577	protein_coding	Ripor3	ENSMUST00000099073	protein_coding	principal1	2	-1	168010618	3580
ENSMUSG00000072754	protein_coding	Lrcol1	ENSMUST00000185691	protein_coding	principal2	5	1	110344730	764
ENSMUSG00000074577	protein_coding	Ripor3	ENSMUST00000131572	retained_intron		2	-1	167986755	558
ENSMUSG00000072754	protein_coding	Lrcol1	ENSMUST00000186408	nonsense_mediated_decay		5	1	110344730	827
ENSMUSG00000026510	protein_coding	Trp53bp2	ENSMUST00000117245	protein_coding	principal1	1	1	182409172	4361
ENSMUSG00000074577	protein_coding	Ripor3	ENSMUST00000142702	retained_intron		2	-1	167991347	1177
ENSMUSG00000106701	unprocessed_pseudogene	Gm6346	ENSMUST00000201146	unprocessed_pseudogene		5	1	93936755	1443
ENSMUSG00000072754	protein_coding	Lrcol1	ENSMUST00000190060	retained_intron		5	1	110344730	1024
ENSMUSG00000086411	antisense	Gm14236	ENSMUST00000142374	antisense		2	1	168010529	872
ENSMUSG00000072754	protein_coding	Lrcol1	ENSMUST00000100924	protein_coding	alternative2	5	1	110354096	692
ENSMUSG00000020053	protein_coding	Igf1	ENSMUST00000122100	protein_coding		10	1	87861329	651
ENSMUSG00000026510	protein_coding	Trp53bp2	ENSMUST00000191804	retained_intron		1	1	182442076	2685
ENSMUSG00000106916	unprocessed_pseudogene	Gm3089	ENSMUST00000200804	unprocessed_pseudogene		5	1	93996481	1395
ENSMUSG00000072754	protein_coding	Lrcol1	ENSMUST00000190963	nonsense_mediated_decay		5	1	110354158	545
ENSMUSG00000026510	protein_coding	Trp53bp2	ENSMUST00000191626	protein_coding		1	1	182444772	568
ENSMUSG00000083889	processed_pseudogene	E530001F21Rik	ENSMUST00000120991	processed_pseudogene		X	-1	105165361	730
ENSMUSG00000114485	processed_pseudogene	Gm47330	ENSMUST00000225198	processed_pseudogene		13	1	118589732	526
ENSMUSG00000109323	lincRNA	Gm44968	ENSMUST00000207652	lincRNA		7	1	81205010	1171
ENSMUSG00000110152	unprocessed_pseudogene	Gm45689	ENSMUST00000210522	unprocessed_pseudogene		7	-1	102861292	133
ENSMUSG00000078315	protein_coding	Fam47c	ENSMUST00000105110	protein_coding	principal1	X	1	78737763	1639
ENSMUSG00000085791	processed_pseudogene	Rpl30-ps9	ENSMUST00000122265	processed_pseudogene		X	-1	105278981	345
ENSMUSG00000072822	protein_coding	BC061212	ENSMUST00000094587	protein_coding	principal1	5	-1	94070545	1897
ENSMUSG00000082912	processed_pseudogene	Gm8770	ENSMUST00000121113	processed_pseudogene		X	1	78785747	1109
ENSMUSG00000083258	processed_pseudogene	Gm5939	ENSMUST00000119613	processed_pseudogene		X	-1	78858281	2874
ENSMUSG00000083067	processed_pseudogene	Gm14751	ENSMUST00000117693	processed_pseudogene		X	-1	79008968	222
ENSMUSG00000096775	protein_coding	Gm5796	ENSMUST00000096184	protein_coding	principal1	14	1	4023941	1817
ENSMUSG00000038533	protein_coding	Cbfa2t2	ENSMUST00000109725	protein_coding	alternative1	2	1	154436481	6080
ENSMUSG00000081049	processed_pseudogene	Rps24-ps3	ENSMUST00000118723	processed_pseudogene		X	1	79195047	402
ENSMUSG00000072821	protein_coding	Gm6351	ENSMUST00000139102	protein_coding		5	1	94076385	578
ENSMUSG00000038533	protein_coding	Cbfa2t2	ENSMUST00000099178	protein_coding		2	1	154436484	3247
ENSMUSG00000009941	protein_coding	Nxf2	ENSMUST00000113189	protein_coding	principal3	X	-1	134964754	2375
ENSMUSG00000072821	protein_coding	Gm6351	ENSMUST00000139828	protein_coding	principal5	5	1	94078168	1542
ENSMUSG00000072821	protein_coding	Gm6351	ENSMUST00000101021	protein_coding	alternative2	5	1	94078202	1443
ENSMUSG00000009941	protein_coding	Nxf2	ENSMUST00000113187	protein_coding	alternative2	X	-1	134963896	2316
ENSMUSG00000114831	processed_pseudogene	Gm18361	ENSMUST00000224199	processed_pseudogene		13	-1	118598918	880
ENSMUSG00000009941	protein_coding	Nxf2	ENSMUST00000010085	protein_coding	alternative2	X	-1	134964754	2393
ENSMUSG00000109878	unprocessed_pseudogene	Olfr567-ps1	ENSMUST00000210349	unprocessed_pseudogene		7	-1	102864778	857
ENSMUSG00000038533	protein_coding	Cbfa2t2	ENSMUST00000045270	protein_coding	principal3	2	1	154436495	6069
ENSMUSG00000096259	protein_coding	Gm3106	ENSMUST00000179743	protein_coding	principal1	5	1	94218005	2383
ENSMUSG00000009941	protein_coding	Nxf2	ENSMUST00000143059	retained_intron		X	-1	134956350	1814
ENSMUSG00000038533	protein_coding	Cbfa2t2	ENSMUST00000109724	protein_coding		2	1	154436535	732
ENSMUSG00000038533	protein_coding	Cbfa2t2	ENSMUST00000155202	protein_coding		2	1	154436842	576
ENSMUSG00000038533	protein_coding	Cbfa2t2	ENSMUST00000137526	protein_coding		2	1	154510536	5074
ENSMUSG00000091703	processed_pseudogene	Gm4222	ENSMUST00000165784	processed_pseudogene		2	1	90148419	470
ENSMUSG00000038533	protein_coding	Cbfa2t2	ENSMUST00000135647	retained_intron		2	1	154515962	381
ENSMUSG00000038533	protein_coding	Cbfa2t2	ENSMUST00000154487	retained_intron		2	1	154523984	560
ENSMUSG00000094560	protein_coding	A430089I19Rik	ENSMUST00000097479	protein_coding	principal1	5	-1	94306796	1848
ENSMUSG00000038533	protein_coding	Cbfa2t2	ENSMUST00000139506	retained_intron		2	1	154531039	455
ENSMUSG00000075065	protein_coding	Olfr1270	ENSMUST00000215578	protein_coding	principal1	2	-1	90153052	4982
ENSMUSG00000017897	protein_coding	Eya2	ENSMUST00000063433	protein_coding	principal1	2	1	165655298	2460
ENSMUSG00000075065	protein_coding	Olfr1270	ENSMUST00000216354	protein_coding	principal1	2	-1	90153064	4836
ENSMUSG00000017897	protein_coding	Eya2	ENSMUST00000128696	processed_transcript		2	1	165761824	508
ENSMUSG00000033712	protein_coding	Ccar2	ENSMUST00000227589	retained_intron		14	-1	70141096	2595
ENSMUSG00000075065	protein_coding	Olfr1270	ENSMUST00000217139	protein_coding	principal1	2	-1	90153078	4803
ENSMUSG00000017897	protein_coding	Eya2	ENSMUST00000150669	processed_transcript		2	1	165655318	959
ENSMUSG00000051251	protein_coding	Nhlh1	ENSMUST00000059794	protein_coding	principal1	1	-1	172057573	2464
ENSMUSG00000095718	protein_coding	Gm6502	ENSMUST00000086050	protein_coding	principal1	5	1	94314435	1533
ENSMUSG00000075065	protein_coding	Olfr1270	ENSMUST00000213946	protein_coding	principal1	2	-1	90153081	4930
ENSMUSG00000017897	protein_coding	Eya2	ENSMUST00000150638	processed_transcript		2	1	165713569	679
ENSMUSG00000021965	protein_coding	Ska3	ENSMUST00000022536	protein_coding	principal1	14	-1	57826163	2260
ENSMUSG00000095718	protein_coding	Gm6502	ENSMUST00000097478	protein_coding		5	1	94314469	1218
ENSMUSG00000022016	protein_coding	Akap11	ENSMUST00000123853	protein_coding	principal1	14	-1	78536808	9364
ENSMUSG00000017897	protein_coding	Eya2	ENSMUST00000128280	processed_transcript		2	1	165769186	369
ENSMUSG00000075065	protein_coding	Olfr1270	ENSMUST00000215975	protein_coding	principal1	2	-1	90153091	4854
ENSMUSG00000021965	protein_coding	Ska3	ENSMUST00000224108	retained_intron		14	-1	57810294	518
ENSMUSG00000075065	protein_coding	Olfr1270	ENSMUST00000099754	protein_coding	principal1	2	-1	90150036	1018
ENSMUSG00000017897	protein_coding	Eya2	ENSMUST00000088132	protein_coding	principal1	2	1	165595032	2447
ENSMUSG00000021965	protein_coding	Ska3	ENSMUST00000225646	processed_transcript		14	-1	57826185	1242
ENSMUSG00000022016	protein_coding	Akap11	ENSMUST00000227808	processed_transcript		14	-1	78503971	3065
ENSMUSG00000021965	protein_coding	Ska3	ENSMUST00000225753	retained_intron		14	-1	57826108	476
ENSMUSG00000081758	processed_pseudogene	Gm11460	ENSMUST00000118200	processed_pseudogene		2	-1	165666857	361
ENSMUSG00000091027	processed_pseudogene	Gm11107	ENSMUST00000165414	processed_pseudogene		14	-1	4049885	505
ENSMUSG00000021965	protein_coding	Ska3	ENSMUST00000223726	processed_transcript		14	-1	57826157	343
ENSMUSG00000022016	protein_coding	Akap11	ENSMUST00000227722	processed_transcript		14	-1	78509992	760
ENSMUSG00000056380	protein_coding	Gpr50	ENSMUST00000070449	protein_coding	principal1	X	1	71663667	3069
ENSMUSG00000022016	protein_coding	Akap11	ENSMUST00000226416	processed_transcript		14	-1	78510124	682
ENSMUSG00000091022	protein_coding	Gm3115	ENSMUST00000166928	protein_coding	principal5	14	1	4084120	1797
ENSMUSG00000056380	protein_coding	Gpr50	ENSMUST00000144712	processed_transcript		X	1	71663966	754
ENSMUSG00000091022	protein_coding	Gm3115	ENSMUST00000177660	protein_coding	alternative2	14	1	4084164	618
ENSMUSG00000056380	protein_coding	Gpr50	ENSMUST00000131554	processed_transcript		X	1	71663966	350
ENSMUSG00000082337	processed_pseudogene	Gm14723	ENSMUST00000118686	processed_pseudogene		X	1	71727657	215
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113696	protein_coding		9	-1	67043907	1714
ENSMUSG00000073965	protein_coding	Olfr568	ENSMUST00000098216	protein_coding	principal1	7	1	102877122	942
ENSMUSG00000083411	processed_pseudogene	Rpl30-ps10	ENSMUST00000117119	processed_pseudogene		X	1	71803688	347
ENSMUSG00000114613	lincRNA	Gm10732	ENSMUST00000224103	lincRNA		13	-1	118658743	1301
ENSMUSG00000021963	protein_coding	Sap18	ENSMUST00000128764	protein_coding	principal1	14	1	57798180	5125
ENSMUSG00000021963	protein_coding	Sap18	ENSMUST00000111269	protein_coding		14	1	57798218	459
ENSMUSG00000091563	protein_coding	Gm8108	ENSMUST00000170207	protein_coding	principal5	14	1	4110526	1961
ENSMUSG00000091563	protein_coding	Gm8108	ENSMUST00000167397	protein_coding	alternative2	14	1	4126066	519
ENSMUSG00000021963	protein_coding	Sap18	ENSMUST00000131455	retained_intron		14	1	57798264	453
ENSMUSG00000021963	protein_coding	Sap18	ENSMUST00000143600	protein_coding		14	1	57798426	521
ENSMUSG00000062142	protein_coding	Olfr569	ENSMUST00000217024	protein_coding	principal1	7	-1	102890882	4741
ENSMUSG00000062142	protein_coding	Olfr569	ENSMUST00000078191	protein_coding	principal1	7	-1	102888151	945
ENSMUSG00000021963	protein_coding	Sap18	ENSMUST00000111268	protein_coding		14	1	57798632	662
ENSMUSG00000021963	protein_coding	Sap18	ENSMUST00000111267	protein_coding		14	1	57798638	660
ENSMUSG00000073964	protein_coding	Olfr570	ENSMUST00000209778	protein_coding	principal1	7	1	102894577	1423
ENSMUSG00000073964	protein_coding	Olfr570	ENSMUST00000098215	protein_coding	principal1	7	1	102900342	1045
ENSMUSG00000027574	protein_coding	Nkain4	ENSMUST00000151494	protein_coding		2	-1	180943077	367
ENSMUSG00000033712	protein_coding	Ccar2	ENSMUST00000035612	protein_coding	principal1	14	-1	70153811	3725
ENSMUSG00000090292	processed_pseudogene	Gm17152	ENSMUST00000172430	processed_pseudogene		14	-1	4141750	535
ENSMUSG00000043310	protein_coding	Olfr571	ENSMUST00000214160	protein_coding	principal1	7	-1	102917510	4999
ENSMUSG00000043310	protein_coding	Olfr571	ENSMUST00000215773	protein_coding	principal1	7	-1	102917536	5153
ENSMUSG00000043310	protein_coding	Olfr571	ENSMUST00000061738	protein_coding	principal1	7	-1	102909837	969
ENSMUSG00000090224	processed_pseudogene	Gm15974	ENSMUST00000159103	processed_pseudogene		17	-1	68371810	531
ENSMUSG00000117274	processed_pseudogene	Gm17921	ENSMUST00000233538	processed_pseudogene		17	1	68698911	945
ENSMUSG00000035673	protein_coding	Sbno2	ENSMUST00000219260	protein_coding	principal1	10	-1	80104370	4850
ENSMUSG00000022089	protein_coding	Bin3	ENSMUST00000022680	protein_coding	principal1	14	1	70100105	1767
ENSMUSG00000080223	unprocessed_pseudogene	Gm13768	ENSMUST00000116469	unprocessed_pseudogene		2	1	90174097	929
ENSMUSG00000022546	protein_coding	Gpt	ENSMUST00000231028	protein_coding		15	1	76695716	827
ENSMUSG00000022089	protein_coding	Bin3	ENSMUST00000227841	processed_transcript		14	1	70100106	201
ENSMUSG00000041565	protein_coding	L3mbtl4	ENSMUST00000150573	retained_intron		17	1	68273797	1564
ENSMUSG00000022089	protein_coding	Bin3	ENSMUST00000226385	processed_transcript		14	1	70100123	524
ENSMUSG00000022089	protein_coding	Bin3	ENSMUST00000228717	nonsense_mediated_decay		14	1	70100138	413
ENSMUSG00000090764	protein_coding	Gm3127	ENSMUST00000167839	protein_coding	alternative2	14	1	4165030	997
ENSMUSG00000090764	protein_coding	Gm3127	ENSMUST00000171866	protein_coding	principal5	14	1	4165088	1758
ENSMUSG00000022089	protein_coding	Bin3	ENSMUST00000228049	processed_transcript		14	1	70100165	600
ENSMUSG00000090764	protein_coding	Gm3127	ENSMUST00000178386	protein_coding	alternative2	14	1	4165093	618
ENSMUSG00000073963	protein_coding	Olfr572	ENSMUST00000215782	protein_coding	principal1	7	1	102924409	1233
ENSMUSG00000073963	protein_coding	Olfr572	ENSMUST00000214096	protein_coding	principal1	7	1	102924411	1126
ENSMUSG00000073963	protein_coding	Olfr572	ENSMUST00000098214	protein_coding	principal1	7	1	102927630	957
ENSMUSG00000041565	protein_coding	L3mbtl4	ENSMUST00000139383	nonsense_mediated_decay		17	1	68273797	2308
ENSMUSG00000041565	protein_coding	L3mbtl4	ENSMUST00000124543	protein_coding		17	1	68273797	2023
ENSMUSG00000041565	protein_coding	L3mbtl4	ENSMUST00000233625	protein_coding		17	1	68764551	2216
ENSMUSG00000041565	protein_coding	L3mbtl4	ENSMUST00000233696	retained_intron		17	1	68773820	2790
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000224882	nonsense_mediated_decay		14	-1	12823053	7857
ENSMUSG00000086709	antisense	Gm16263	ENSMUST00000144680	antisense		13	-1	118715396	502
ENSMUSG00000027574	protein_coding	Nkain4	ENSMUST00000103053	protein_coding	principal1	2	-1	180954699	950
ENSMUSG00000041565	protein_coding	L3mbtl4	ENSMUST00000093007	protein_coding	principal1	17	1	68273797	2445
ENSMUSG00000027574	protein_coding	Nkain4	ENSMUST00000139929	protein_coding		2	-1	180954620	433
ENSMUSG00000027574	protein_coding	Nkain4	ENSMUST00000148905	protein_coding		2	-1	180954694	491
ENSMUSG00000021732	protein_coding	Fgf10	ENSMUST00000022246	protein_coding	principal1	13	1	118714699	4114
ENSMUSG00000027574	protein_coding	Nkain4	ENSMUST00000134231	processed_transcript		2	-1	180954319	450
ENSMUSG00000035673	protein_coding	Sbno2	ENSMUST00000218630	protein_coding		10	-1	80101187	3903
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000222742	processed_transcript		13	1	73733094	1813
ENSMUSG00000027574	protein_coding	Nkain4	ENSMUST00000137274	protein_coding		2	-1	180949590	341
ENSMUSG00000027574	protein_coding	Nkain4	ENSMUST00000108873	protein_coding		2	-1	180954699	865
ENSMUSG00000021732	protein_coding	Fgf10	ENSMUST00000146674	processed_transcript		13	1	118669824	391
ENSMUSG00000035673	protein_coding	Sbno2	ENSMUST00000217972	protein_coding		10	-1	80075426	2462
ENSMUSG00000021732	protein_coding	Fgf10	ENSMUST00000128103	processed_transcript		13	1	118669791	685
ENSMUSG00000087293	antisense	Gm14341	ENSMUST00000154616	antisense		2	1	180954464	667
ENSMUSG00000035673	protein_coding	Sbno2	ENSMUST00000217876	retained_intron		10	-1	80075439	2156
ENSMUSG00000035673	protein_coding	Sbno2	ENSMUST00000218462	retained_intron		10	-1	80105571	2131
ENSMUSG00000035673	protein_coding	Sbno2	ENSMUST00000219258	nonsense_mediated_decay		10	-1	80102698	3772
ENSMUSG00000035673	protein_coding	Sbno2	ENSMUST00000218310	retained_intron		10	-1	80075400	1409
ENSMUSG00000035673	protein_coding	Sbno2	ENSMUST00000217683	retained_intron		10	-1	80102643	2601
ENSMUSG00000022546	protein_coding	Gpt	ENSMUST00000229679	protein_coding	principal1	15	1	76695785	1772
ENSMUSG00000035673	protein_coding	Sbno2	ENSMUST00000042771	protein_coding	principal1	10	-1	80102698	4227
ENSMUSG00000075064	protein_coding	Olfr1506	ENSMUST00000213994	protein_coding	principal1	2	-1	90224493	2495
ENSMUSG00000022546	protein_coding	Gpt	ENSMUST00000230482	retained_intron		15	1	76696732	2804
ENSMUSG00000075064	protein_coding	Olfr1506	ENSMUST00000215571	processed_transcript		2	-1	90222495	563
ENSMUSG00000022546	protein_coding	Gpt	ENSMUST00000023203	protein_coding	principal1	15	1	76696733	1792
ENSMUSG00000022546	protein_coding	Gpt	ENSMUST00000229340	retained_intron		15	1	76696736	1794
ENSMUSG00000022546	protein_coding	Gpt	ENSMUST00000230283	retained_intron		15	1	76696736	1957
ENSMUSG00000022546	protein_coding	Gpt	ENSMUST00000229734	nonsense_mediated_decay		15	1	76696746	1606
ENSMUSG00000022546	protein_coding	Gpt	ENSMUST00000229856	retained_intron		15	1	76696766	2223
ENSMUSG00000079391	protein_coding	Gm2974	ENSMUST00000164512	protein_coding	principal5	14	1	4182576	1990
ENSMUSG00000022546	protein_coding	Gpt	ENSMUST00000228987	retained_intron		15	1	76698062	623
ENSMUSG00000022546	protein_coding	Gpt	ENSMUST00000229140	protein_coding		15	1	76698211	982
ENSMUSG00000079391	protein_coding	Gm2974	ENSMUST00000180184	protein_coding	alternative2	14	1	4198185	447
ENSMUSG00000093625	unprocessed_pseudogene	Gm18953	ENSMUST00000175694	unprocessed_pseudogene		2	1	90239483	300
ENSMUSG00000111394	TEC	Gm49759	ENSMUST00000214037	TEC		9	1	59672814	3887
ENSMUSG00000052785	protein_coding	Olfr573-ps1	ENSMUST00000210571	protein_coding	principal1	7	-1	102942575	894
ENSMUSG00000052785	protein_coding	Olfr573-ps1	ENSMUST00000064830	protein_coding		7	-1	102942575	888
ENSMUSG00000108125	processed_pseudogene	Gm17812	ENSMUST00000204935	processed_pseudogene		6	1	120908673	318
ENSMUSG00000045824	protein_coding	Olfr574	ENSMUST00000211329	protein_coding	alternative2	7	1	102948469	1039
ENSMUSG00000045824	protein_coding	Olfr574	ENSMUST00000052997	protein_coding	principal2	7	1	102948467	1041
ENSMUSG00000004446	protein_coding	Bid	ENSMUST00000160684	nonsense_mediated_decay		6	-1	120916836	2415
ENSMUSG00000004446	protein_coding	Bid	ENSMUST00000004560	protein_coding	principal1	6	-1	120916853	2189
ENSMUSG00000075063	protein_coding	Olfr142	ENSMUST00000213968	protein_coding	principal1	2	-1	90257592	3630
ENSMUSG00000004446	protein_coding	Bid	ENSMUST00000161594	retained_intron		6	-1	120897568	563
ENSMUSG00000075063	protein_coding	Olfr142	ENSMUST00000099752	protein_coding	principal1	2	-1	90252986	918
ENSMUSG00000004446	protein_coding	Bid	ENSMUST00000145948	protein_coding		6	-1	120916798	535
ENSMUSG00000004446	protein_coding	Bid	ENSMUST00000125915	processed_transcript		6	-1	120916803	458
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000035055	protein_coding		9	1	109931460	6091
ENSMUSG00000094072	processed_pseudogene	Gm11105	ENSMUST00000112781	processed_pseudogene		14	-1	4219624	478
ENSMUSG00000114868	processed_pseudogene	Gm47335	ENSMUST00000224309	processed_pseudogene		13	-1	118858414	270
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000169851	protein_coding		9	1	109931800	3446
ENSMUSG00000009112	protein_coding	Bcl2l13	ENSMUST00000203584	protein_coding		6	1	120836212	349
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000165876	protein_coding		9	1	109931864	5573
ENSMUSG00000009112	protein_coding	Bcl2l13	ENSMUST00000204004	retained_intron		6	1	120836212	2710
ENSMUSG00000009112	protein_coding	Bcl2l13	ENSMUST00000203037	protein_coding		6	1	120836226	408
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000197289	processed_transcript		9	1	109969017	940
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000196729	processed_transcript		9	1	110026119	442
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000163190	protein_coding		9	1	110036742	4322
ENSMUSG00000066269	protein_coding	Olfr575	ENSMUST00000216420	protein_coding	principal1	7	-1	102958775	3500
ENSMUSG00000066269	protein_coding	Olfr575	ENSMUST00000213477	protein_coding	principal1	7	-1	102958775	3512
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000164930	protein_coding	principal1	9	1	110052048	4925
ENSMUSG00000024151	protein_coding	Msh2	ENSMUST00000024967	protein_coding	principal1	17	1	87672330	3283
ENSMUSG00000066269	protein_coding	Olfr575	ENSMUST00000084812	protein_coding		7	-1	102955620	957
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000199498	protein_coding		9	1	110052052	4055
ENSMUSG00000073131	protein_coding	Vma21	ENSMUST00000114576	protein_coding	principal1	X	1	71816758	4195
ENSMUSG00000091114	protein_coding	Gm3138	ENSMUST00000165431	protein_coding	principal1	14	1	4249631	1760
ENSMUSG00000073131	protein_coding	Vma21	ENSMUST00000114577	protein_coding		X	1	71815924	4652
ENSMUSG00000024151	protein_coding	Msh2	ENSMUST00000174240	retained_intron		17	1	87672540	1752
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000163979	protein_coding		9	1	110062591	3320
ENSMUSG00000073131	protein_coding	Vma21	ENSMUST00000114575	protein_coding		X	1	71816790	4290
ENSMUSG00000114736	lincRNA	Gm47336	ENSMUST00000223952	lincRNA		13	-1	119279545	356
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000198185	processed_transcript		9	1	110062599	829
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000199461	protein_coding		9	1	110067584	1176
ENSMUSG00000073131	protein_coding	Vma21	ENSMUST00000138979	processed_transcript		X	1	71816813	483
ENSMUSG00000024151	protein_coding	Msh2	ENSMUST00000173097	retained_intron		17	1	87672561	2502
ENSMUSG00000024151	protein_coding	Msh2	ENSMUST00000172855	protein_coding		17	1	87672609	630
ENSMUSG00000073131	protein_coding	Vma21	ENSMUST00000154054	processed_transcript		X	1	71816790	2537
ENSMUSG00000024151	protein_coding	Msh2	ENSMUST00000172596	retained_intron		17	1	87688942	409
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000199548	protein_coding		9	1	110067584	1383
ENSMUSG00000024151	protein_coding	Msh2	ENSMUST00000174703	nonsense_mediated_decay		17	1	87696541	510
ENSMUSG00000075062	protein_coding	Olfr1271	ENSMUST00000216383	protein_coding	principal1	2	-1	90271032	6613
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000198511	protein_coding		9	1	110068824	825
ENSMUSG00000075062	protein_coding	Olfr1271	ENSMUST00000217396	processed_transcript		2	-1	90271032	6521
ENSMUSG00000075062	protein_coding	Olfr1271	ENSMUST00000099751	protein_coding	principal1	2	-1	90266428	918
ENSMUSG00000009112	protein_coding	Bcl2l13	ENSMUST00000009256	protein_coding	principal1	6	1	120836238	6925
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000199161	protein_coding		9	1	110068848	693
ENSMUSG00000083744	processed_pseudogene	Gm14824	ENSMUST00000119421	processed_pseudogene		X	-1	105328475	737
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000196763	retained_intron		9	1	110077600	740
ENSMUSG00000091368	processed_pseudogene	Gm17085	ENSMUST00000165425	processed_pseudogene		14	1	4266085	502
ENSMUSG00000107971	TEC	Gm44260	ENSMUST00000204946	TEC		6	-1	120914993	2094
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000200480	protein_coding		9	1	110078049	758
ENSMUSG00000032479	protein_coding	Map4	ENSMUST00000199985	protein_coding		9	1	110079800	754
ENSMUSG00000105230	TEC	Gm42433	ENSMUST00000196806	TEC		9	1	110005974	940
ENSMUSG00000105962	TEC	Gm42432	ENSMUST00000197902	TEC		9	1	110041180	1617
ENSMUSG00000105856	antisense	Gm43732	ENSMUST00000200260	antisense		9	-1	109991834	511
ENSMUSG00000073962	protein_coding	Olfr576	ENSMUST00000098213	protein_coding	principal1	7	1	102962660	3132
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000189505	protein_coding		1	1	90998737	1031
ENSMUSG00000073962	protein_coding	Olfr576	ENSMUST00000185326	protein_coding		7	1	102965102	927
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000017900	protein_coding	principal1	13	1	73763697	5142
ENSMUSG00000087620	lincRNA	5330434G04Rik	ENSMUST00000136406	lincRNA		X	-1	105391776	3545
ENSMUSG00000087620	lincRNA	5330434G04Rik	ENSMUST00000150604	lincRNA		X	-1	105391776	1393
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000228249	retained_intron		14	-1	54913103	4488
ENSMUSG00000043354	protein_coding	Olfr577	ENSMUST00000215237	protein_coding	principal1	7	-1	102975943	3144
ENSMUSG00000087620	lincRNA	5330434G04Rik	ENSMUST00000142109	lincRNA		X	-1	105391754	3449
ENSMUSG00000087620	lincRNA	5330434G04Rik	ENSMUST00000130264	lincRNA		X	-1	105387914	511
ENSMUSG00000043354	protein_coding	Olfr577	ENSMUST00000214080	protein_coding	principal1	7	-1	102975943	3282
ENSMUSG00000043354	protein_coding	Olfr577	ENSMUST00000051505	protein_coding	principal1	7	-1	102973990	939
ENSMUSG00000039199	protein_coding	Zdhhc1	ENSMUST00000212303	protein_coding	principal1	8	-1	105496870	2056
ENSMUSG00000039199	protein_coding	Zdhhc1	ENSMUST00000212109	retained_intron		8	-1	105480461	2874
ENSMUSG00000039199	protein_coding	Zdhhc1	ENSMUST00000212538	retained_intron		8	-1	105496902	677
ENSMUSG00000039199	protein_coding	Zdhhc1	ENSMUST00000044286	protein_coding	principal1	8	-1	105484350	1737
ENSMUSG00000079389	protein_coding	Gm3149	ENSMUST00000112779	protein_coding	alternative2	14	1	4317283	997
ENSMUSG00000079389	protein_coding	Gm3149	ENSMUST00000171810	protein_coding	principal5	14	1	4317341	1759
ENSMUSG00000044641	protein_coding	Pard6b	ENSMUST00000052125	protein_coding	principal1	2	1	168081004	3399
ENSMUSG00000079389	protein_coding	Gm3149	ENSMUST00000179649	protein_coding	alternative2	14	1	4317346	618
ENSMUSG00000082464	processed_pseudogene	Rab9b-ps1	ENSMUST00000119785	processed_pseudogene		X	1	105482098	606
ENSMUSG00000022483	protein_coding	Col2a1	ENSMUST00000088355	protein_coding	alternative1	15	-1	98004657	4862
ENSMUSG00000080809	polymorphic_pseudogene	Olfr1273-ps	ENSMUST00000214356	polymorphic_pseudogene	principal1	2	-1	90298714	4698
ENSMUSG00000118526	unitary_pseudogene	AL831766.1	ENSMUST00000239040	unitary_pseudogene		2	1	168114877	577
ENSMUSG00000075061	protein_coding	Olfr1272	ENSMUST00000117141	protein_coding	principal1	2	-1	90292841	2442
ENSMUSG00000085267	lincRNA	Gm14235	ENSMUST00000142445	lincRNA		2	-1	168153533	366
ENSMUSG00000075061	protein_coding	Olfr1272	ENSMUST00000099750	protein_coding	principal1	2	-1	90282573	927
ENSMUSG00000087648	lincRNA	E130018N17Rik	ENSMUST00000129713	lincRNA		2	-1	168154513	1309
ENSMUSG00000022483	protein_coding	Col2a1	ENSMUST00000023123	protein_coding	principal3	15	-1	98004695	5104
ENSMUSG00000045792	protein_coding	Olfr578	ENSMUST00000215606	protein_coding	principal1	7	-1	102989324	3665
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000231305	protein_coding		14	-1	54913132	2290
ENSMUSG00000045792	protein_coding	Olfr578	ENSMUST00000056235	protein_coding	principal1	7	-1	102985162	942
ENSMUSG00000090132	protein_coding	Cypt2	ENSMUST00000041758	protein_coding	principal1	X	1	105499772	697
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000222253	processed_transcript		13	1	73763707	3242
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000220535	nonsense_mediated_decay		13	1	73763723	1433
ENSMUSG00000081976	processed_pseudogene	Gm14823	ENSMUST00000117698	processed_pseudogene		X	-1	105568138	238
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000226718	retained_intron		14	-1	54912890	2302
ENSMUSG00000022483	protein_coding	Col2a1	ENSMUST00000131560	processed_transcript		15	-1	98000505	575
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000227600	retained_intron		14	-1	54913094	2595
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000221196	retained_intron		13	1	73763739	4059
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000227880	nonsense_mediated_decay		14	-1	54913126	2041
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000220522	retained_intron		13	1	73763739	6987
ENSMUSG00000084376	processed_pseudogene	Gm14855	ENSMUST00000119925	processed_pseudogene		X	1	105688024	192
ENSMUSG00000022483	protein_coding	Col2a1	ENSMUST00000131910	retained_intron		15	-1	97988921	654
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000223008	retained_intron		13	1	73797612	736
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000220686	processed_transcript		13	1	73800941	512
ENSMUSG00000022483	protein_coding	Col2a1	ENSMUST00000128547	processed_transcript		15	-1	97990476	491
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000223454	retained_intron		13	1	73804609	1504
ENSMUSG00000082275	processed_pseudogene	Gm14854	ENSMUST00000117758	processed_pseudogene		X	1	105706966	841
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000222309	retained_intron		13	1	73809906	377
ENSMUSG00000017756	protein_coding	Slc12a7	ENSMUST00000221813	retained_intron		13	1	73813463	356
ENSMUSG00000022483	protein_coding	Col2a1	ENSMUST00000139246	retained_intron		15	-1	97999465	809
ENSMUSG00000022483	protein_coding	Col2a1	ENSMUST00000133488	processed_transcript		15	-1	97999693	626
ENSMUSG00000063442	processed_pseudogene	Gm7117	ENSMUST00000071515	processed_pseudogene		X	-1	105725514	387
ENSMUSG00000022483	protein_coding	Col2a1	ENSMUST00000127879	processed_transcript		15	-1	98001887	715
ENSMUSG00000022483	protein_coding	Col2a1	ENSMUST00000140064	retained_intron		15	-1	98004657	613
ENSMUSG00000113138	lincRNA	Gm47177	ENSMUST00000222826	lincRNA		12	-1	99569668	272
ENSMUSG00000022483	protein_coding	Col2a1	ENSMUST00000230148	retained_intron		15	-1	98004491	3666
ENSMUSG00000097917	bidirectional_promoter_lncRNA	Gm26839	ENSMUST00000222797	bidirectional_promoter_lncRNA		12	1	99563796	566
ENSMUSG00000097917	bidirectional_promoter_lncRNA	Gm26839	ENSMUST00000180686	bidirectional_promoter_lncRNA		12	1	99563841	842
ENSMUSG00000114190	TEC	4930556H04Rik	ENSMUST00000222451	TEC		12	1	99569740	1675
ENSMUSG00000073497	protein_coding	AA792892	ENSMUST00000202253	protein_coding	principal1	5	1	94377317	1980
ENSMUSG00000073497	protein_coding	AA792892	ENSMUST00000097477	protein_coding	principal1	5	1	94339749	1842
ENSMUSG00000107315	unprocessed_pseudogene	BC080696	ENSMUST00000202858	unprocessed_pseudogene		5	-1	94436925	1218
ENSMUSG00000025584	protein_coding	Pde8a	ENSMUST00000026672	protein_coding	principal1	7	1	81213596	3802
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000226467	nonsense_mediated_decay		14	-1	54912564	1999
ENSMUSG00000025584	protein_coding	Pde8a	ENSMUST00000128154	processed_transcript		7	1	81295707	583
ENSMUSG00000025584	protein_coding	Pde8a	ENSMUST00000130494	processed_transcript		7	1	81306693	861
ENSMUSG00000083774	processed_pseudogene	Gm7180	ENSMUST00000121753	processed_pseudogene		7	-1	81222874	513
ENSMUSG00000028669	protein_coding	Pithd1	ENSMUST00000105851	protein_coding	principal1	4	-1	135987264	1700
ENSMUSG00000028023	protein_coding	Pitx2	ENSMUST00000174661	protein_coding	principal3	3	1	129199878	1942
ENSMUSG00000028669	protein_coding	Pithd1	ENSMUST00000150885	processed_transcript		4	-1	135985938	781
ENSMUSG00000028023	protein_coding	Pitx2	ENSMUST00000029657	protein_coding		3	1	129199922	1680
ENSMUSG00000028669	protein_coding	Pithd1	ENSMUST00000123737	retained_intron		4	-1	135979114	530
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000228119	protein_coding	alternative2	14	-1	54913103	2348
ENSMUSG00000028669	protein_coding	Pithd1	ENSMUST00000147458	protein_coding		4	-1	135986322	465
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000226690	nonsense_mediated_decay		14	-1	54909825	1406
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000228495	protein_coding	alternative2	14	-1	54913098	2340
ENSMUSG00000028669	protein_coding	Pithd1	ENSMUST00000123404	protein_coding		4	-1	135986917	359
ENSMUSG00000028023	protein_coding	Pitx2	ENSMUST00000106382	protein_coding	alternative1	3	1	129199926	1757
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000228588	nonsense_mediated_decay		14	-1	54912514	1446
ENSMUSG00000082800	processed_pseudogene	Gm13560	ENSMUST00000121865	processed_pseudogene		2	1	58894040	329
ENSMUSG00000028669	protein_coding	Pithd1	ENSMUST00000133438	retained_intron		4	-1	135987081	626
ENSMUSG00000028023	protein_coding	Pitx2	ENSMUST00000173645	protein_coding		3	1	129199969	534
ENSMUSG00000028669	protein_coding	Pithd1	ENSMUST00000125394	processed_transcript		4	-1	135987087	242
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000226456	retained_intron		14	-1	54908994	767
ENSMUSG00000028023	protein_coding	Pitx2	ENSMUST00000172645	protein_coding		3	1	129203947	915
ENSMUSG00000022199	protein_coding	Slc22a17	ENSMUST00000050772	protein_coding	principal2	14	-1	54913132	2294
ENSMUSG00000028023	protein_coding	Pitx2	ENSMUST00000187145	retained_intron		3	1	129213932	2843
ENSMUSG00000028023	protein_coding	Pitx2	ENSMUST00000042587	protein_coding	alternative1	3	1	129213972	2271
ENSMUSG00000105810	TEC	Gm43435	ENSMUST00000199996	TEC		3	1	108555467	1438
ENSMUSG00000028023	protein_coding	Pitx2	ENSMUST00000174623	protein_coding		3	1	129214275	1493
ENSMUSG00000068732	protein_coding	Tmem167b	ENSMUST00000106622	protein_coding		3	-1	108562170	2752
ENSMUSG00000098515	sense_intronic	Gm27195	ENSMUST00000184283	sense_intronic		3	1	129210006	681
ENSMUSG00000068732	protein_coding	Tmem167b	ENSMUST00000090546	protein_coding	principal1	3	-1	108562466	2864
ENSMUSG00000036641	protein_coding	Ccdc148	ENSMUST00000226455	protein_coding	alternative2	2	-1	59160663	4612
ENSMUSG00000036641	protein_coding	Ccdc148	ENSMUST00000077687	protein_coding	principal2	2	-1	59160683	3977
ENSMUSG00000113076	TEC	Gm47088	ENSMUST00000223326	TEC		13	1	93317427	1639
ENSMUSG00000036641	protein_coding	Ccdc148	ENSMUST00000134708	processed_transcript		2	-1	58921092	4548
ENSMUSG00000090021	processed_pseudogene	Gm6493	ENSMUST00000159889	processed_pseudogene		16	-1	23017038	2639
ENSMUSG00000036641	protein_coding	Ccdc148	ENSMUST00000131959	processed_transcript		2	-1	59160534	1586
ENSMUSG00000084250	processed_pseudogene	Gm13550	ENSMUST00000118185	processed_pseudogene		2	-1	59148623	525
ENSMUSG00000082989	processed_pseudogene	Gm13557	ENSMUST00000120771	processed_pseudogene		2	-1	58959707	382
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000220609	processed_transcript		13	1	93299635	625
ENSMUSG00000078919	protein_coding	Dpm1	ENSMUST00000154111	protein_coding	principal1	2	-1	168230379	2293
ENSMUSG00000074011	protein_coding	Gm7682	ENSMUST00000202916	protein_coding	principal5	5	1	94445784	1582
ENSMUSG00000074011	protein_coding	Gm7682	ENSMUST00000098289	protein_coding	alternative2	5	1	94445818	1443
ENSMUSG00000078919	protein_coding	Dpm1	ENSMUST00000153258	retained_intron		2	-1	168217704	511
ENSMUSG00000078919	protein_coding	Dpm1	ENSMUST00000109193	protein_coding		2	-1	168230591	1076
ENSMUSG00000100211	lincRNA	1700064M15Rik	ENSMUST00000185726	lincRNA		12	-1	99627974	645
ENSMUSG00000078919	protein_coding	Dpm1	ENSMUST00000136582	retained_intron		2	-1	168215969	4959
ENSMUSG00000073077	protein_coding	Cfap47	ENSMUST00000197180	protein_coding	principal5	X	-1	79517285	9568
ENSMUSG00000078919	protein_coding	Dpm1	ENSMUST00000141036	retained_intron		2	-1	168213261	538
ENSMUSG00000073077	protein_coding	Cfap47	ENSMUST00000199433	retained_intron		X	-1	79350310	763
ENSMUSG00000078919	protein_coding	Dpm1	ENSMUST00000099072	nonsense_mediated_decay		2	-1	168230328	722
ENSMUSG00000073077	protein_coding	Cfap47	ENSMUST00000196318	processed_transcript		X	-1	79358068	709
ENSMUSG00000073077	protein_coding	Cfap47	ENSMUST00000101410	protein_coding	alternative2	X	-1	79517285	2832
ENSMUSG00000073077	protein_coding	Cfap47	ENSMUST00000114021	protein_coding	alternative2	X	-1	79357959	1083
ENSMUSG00000073077	protein_coding	Cfap47	ENSMUST00000179788	protein_coding		X	-1	79434418	1254
ENSMUSG00000095074	protein_coding	Gm3139	ENSMUST00000201138	protein_coding		5	1	94526287	1303
ENSMUSG00000078919	protein_coding	Dpm1	ENSMUST00000140249	retained_intron		2	-1	168223318	630
ENSMUSG00000095074	protein_coding	Gm3139	ENSMUST00000202642	protein_coding	principal1	5	1	94526304	2048
ENSMUSG00000078919	protein_coding	Dpm1	ENSMUST00000150437	processed_transcript		2	-1	168230076	765
ENSMUSG00000095074	protein_coding	Gm3139	ENSMUST00000178330	protein_coding	principal1	5	1	94534849	1446
ENSMUSG00000073130	protein_coding	Gm1141	ENSMUST00000154780	protein_coding	principal1	X	1	71920947	2838
ENSMUSG00000078919	protein_coding	Dpm1	ENSMUST00000142482	retained_intron		2	-1	168230230	435
ENSMUSG00000078919	protein_coding	Dpm1	ENSMUST00000156800	retained_intron		2	-1	168230362	460
ENSMUSG00000113012	TEC	Gm47196	ENSMUST00000221736	TEC		12	-1	99641924	2209
ENSMUSG00000073130	protein_coding	Gm1141	ENSMUST00000101495	protein_coding		X	1	71932438	2147
ENSMUSG00000093752	protein_coding	Gm20716	ENSMUST00000138667	nonsense_mediated_decay	principal1	2	-1	168230364	5288
ENSMUSG00000095503	protein_coding	Gm3147	ENSMUST00000201071	protein_coding	principal1	5	-1	94616342	1848
ENSMUSG00000095503	protein_coding	Gm3147	ENSMUST00000180178	protein_coding		5	-1	94615161	1221
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000185531	protein_coding		1	1	90998777	1747
ENSMUSG00000051149	protein_coding	Adnp	ENSMUST00000057793	protein_coding	principal1	2	-1	168206922	4917
ENSMUSG00000051149	protein_coding	Adnp	ENSMUST00000088001	protein_coding	principal1	2	-1	168207112	4932
ENSMUSG00000051149	protein_coding	Adnp	ENSMUST00000139984	processed_transcript		2	-1	168206709	434
ENSMUSG00000032481	protein_coding	Smarcc1	ENSMUST00000098355	protein_coding		9	1	110117708	364
ENSMUSG00000051149	protein_coding	Adnp	ENSMUST00000131200	retained_intron		2	-1	168206709	554
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000112658	protein_coding	alternative2	14	-1	12823079	5458
ENSMUSG00000050138	protein_coding	Kcnk12	ENSMUST00000055221	protein_coding	principal1	17	-1	87797994	1972
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000067491	protein_coding	principal4	14	-1	12823045	5421
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000225807	processed_transcript		14	-1	12406288	1091
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000223637	processed_transcript		14	-1	12376943	332
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000224140	retained_intron		14	-1	12377279	790
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000224581	protein_coding		14	-1	12489517	1207
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000068116	protein_coding	alternative2	1	1	90998779	2050
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000224106	processed_transcript		14	-1	12541958	3660
ENSMUSG00000031230	protein_coding	Fgf16	ENSMUST00000033581	protein_coding	principal1	X	1	105764279	1645
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000097649	protein_coding		1	1	91053454	3645
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000224704	retained_intron		14	-1	12474527	4361
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000225606	retained_intron		14	-1	12546401	433
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000112657	protein_coding	alternative2	14	-1	12823079	5455
ENSMUSG00000117466	lincRNA	Gm50039	ENSMUST00000234934	lincRNA		17	1	87825073	2598
ENSMUSG00000054423	protein_coding	Cadps	ENSMUST00000177814	protein_coding	alternative2	14	-1	12823079	5461
ENSMUSG00000117466	lincRNA	Gm50039	ENSMUST00000234350	lincRNA		17	1	87825073	2452
ENSMUSG00000027291	protein_coding	Vps39	ENSMUST00000028752	protein_coding	principal3	2	-1	120353125	4339
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000186762	protein_coding		1	1	91053507	447
ENSMUSG00000078519	lincRNA	2310026L22Rik	ENSMUST00000146658	lincRNA		4	1	138215714	400
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000097650	protein_coding	principal3	1	1	91053507	2760
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000189617	protein_coding	alternative2	1	1	91053586	2155
ENSMUSG00000027291	protein_coding	Vps39	ENSMUST00000102501	protein_coding	alternative1	2	-1	120353137	4384
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000188094	processed_transcript		1	1	91111214	2642
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000188708	processed_transcript		1	1	91111233	654
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000187375	processed_transcript		1	1	91119960	215
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000187532	retained_intron		1	1	91125356	483
ENSMUSG00000026305	protein_coding	Lrrfip1	ENSMUST00000068167	protein_coding	alternative2	1	1	91053444	2849
ENSMUSG00000106062	TEC	Gm43820	ENSMUST00000199414	TEC		3	1	37644607	3346
ENSMUSG00000104935	TEC	Gm43414	ENSMUST00000197710	TEC		3	1	37708021	3188
ENSMUSG00000022416	protein_coding	Cacna1i	ENSMUST00000160424	protein_coding	principal1	15	1	80287238	9781
ENSMUSG00000058174	protein_coding	Gm5148	ENSMUST00000079755	protein_coding	principal1	3	-1	37724410	1265
ENSMUSG00000022416	protein_coding	Cacna1i	ENSMUST00000162155	nonsense_mediated_decay		15	1	80287534	6913
ENSMUSG00000058174	protein_coding	Gm5148	ENSMUST00000108105	protein_coding	principal1	3	-1	37724329	1282
ENSMUSG00000022416	protein_coding	Cacna1i	ENSMUST00000161863	protein_coding		15	1	80389328	394
ENSMUSG00000058174	protein_coding	Gm5148	ENSMUST00000099128	protein_coding	principal1	3	-1	37724490	1098
ENSMUSG00000022416	protein_coding	Cacna1i	ENSMUST00000162025	protein_coding		15	1	80389328	313
ENSMUSG00000026123	protein_coding	Plekhb2	ENSMUST00000156687	protein_coding		1	1	34849976	5176
ENSMUSG00000058174	protein_coding	Gm5148	ENSMUST00000134904	processed_transcript		3	-1	37724331	2579
ENSMUSG00000027291	protein_coding	Vps39	ENSMUST00000129857	processed_transcript		2	-1	120353121	4055
ENSMUSG00000022416	protein_coding	Cacna1i	ENSMUST00000162913	processed_transcript		15	1	80389328	273
ENSMUSG00000100755	processed_pseudogene	Rps23-ps1	ENSMUST00000116115	processed_pseudogene		3	1	37714740	425
ENSMUSG00000027291	protein_coding	Vps39	ENSMUST00000133260	retained_intron		2	-1	120319582	200
ENSMUSG00000022416	protein_coding	Cacna1i	ENSMUST00000160175	protein_coding		15	1	80389328	779
ENSMUSG00000027291	protein_coding	Vps39	ENSMUST00000145193	retained_intron		2	-1	120323490	3545
ENSMUSG00000027291	protein_coding	Vps39	ENSMUST00000147085	retained_intron		2	-1	120353109	3379
ENSMUSG00000003458	protein_coding	Ncstn	ENSMUST00000003550	protein_coding	principal1	1	-1	172082795	2901
ENSMUSG00000027291	protein_coding	Vps39	ENSMUST00000132476	retained_intron		2	-1	120333433	469
ENSMUSG00000026123	protein_coding	Plekhb2	ENSMUST00000027297	protein_coding	principal1	1	1	34849992	3279
ENSMUSG00000117455	processed_pseudogene	Gm50040	ENSMUST00000234870	processed_pseudogene		17	1	87949927	459
ENSMUSG00000027291	protein_coding	Vps39	ENSMUST00000138854	processed_transcript		2	-1	120344207	602
ENSMUSG00000027291	protein_coding	Vps39	ENSMUST00000156296	processed_transcript		2	-1	120353121	691
ENSMUSG00000117522	processed_pseudogene	Gm50041	ENSMUST00000234265	processed_pseudogene		17	-1	87969220	217
ENSMUSG00000026123	protein_coding	Plekhb2	ENSMUST00000152654	protein_coding		1	1	34851837	344
ENSMUSG00000027291	protein_coding	Vps39	ENSMUST00000126526	processed_transcript		2	-1	120353125	343
ENSMUSG00000026123	protein_coding	Plekhb2	ENSMUST00000191722	processed_transcript		1	1	34877656	302
ENSMUSG00000094195	protein_coding	Gm6509	ENSMUST00000201552	protein_coding	principal1	5	1	94623979	1582
ENSMUSG00000003458	protein_coding	Ncstn	ENSMUST00000140643	nonsense_mediated_decay		1	-1	172082795	3016
ENSMUSG00000094195	protein_coding	Gm6509	ENSMUST00000098286	protein_coding		5	1	94624013	1218
ENSMUSG00000003458	protein_coding	Ncstn	ENSMUST00000146137	nonsense_mediated_decay		1	-1	172082795	2777
ENSMUSG00000003458	protein_coding	Ncstn	ENSMUST00000142825	retained_intron		1	-1	172082795	772
ENSMUSG00000003458	protein_coding	Ncstn	ENSMUST00000122986	retained_intron		1	-1	172071268	794
ENSMUSG00000003458	protein_coding	Ncstn	ENSMUST00000135928	retained_intron		1	-1	172068064	831
ENSMUSG00000103380	antisense	Gm37756	ENSMUST00000191834	antisense		1	-1	172092679	942
ENSMUSG00000102779	processed_pseudogene	Gm38164	ENSMUST00000192810	processed_pseudogene		1	1	172088474	330
ENSMUSG00000086273	antisense	Rbm46os	ENSMUST00000147649	antisense		3	1	82876705	530
ENSMUSG00000086273	antisense	Rbm46os	ENSMUST00000149223	antisense		3	1	82876705	753
ENSMUSG00000086273	antisense	Rbm46os	ENSMUST00000156457	antisense		3	1	82876746	679
ENSMUSG00000086273	antisense	Rbm46os	ENSMUST00000131274	antisense		3	1	82904477	3261
ENSMUSG00000102595	lincRNA	Gm30097	ENSMUST00000193581	lincRNA		3	-1	83008488	447
ENSMUSG00000102595	lincRNA	Gm30097	ENSMUST00000194580	lincRNA		3	-1	82995585	329
ENSMUSG00000033860	protein_coding	Fgg	ENSMUST00000048486	protein_coding	principal3	3	1	83007724	1695
ENSMUSG00000033860	protein_coding	Fgg	ENSMUST00000194175	protein_coding	alternative2	3	1	83007861	1741
ENSMUSG00000028003	protein_coding	Lrat	ENSMUST00000029632	protein_coding	principal1	3	-1	82903973	5351
ENSMUSG00000026553	protein_coding	Copa	ENSMUST00000135192	protein_coding	principal1	1	1	172082529	4622
ENSMUSG00000108347	processed_pseudogene	Gm19187	ENSMUST00000206781	processed_pseudogene		7	-1	56217253	892
ENSMUSG00000044551	protein_coding	9930012K11Rik	ENSMUST00000058240	protein_coding	principal3	14	-1	70159502	1986
ENSMUSG00000026553	protein_coding	Copa	ENSMUST00000138407	retained_intron		1	1	172082643	2973
ENSMUSG00000044551	protein_coding	9930012K11Rik	ENSMUST00000153871	protein_coding	alternative2	14	-1	70159502	1983
ENSMUSG00000044551	protein_coding	9930012K11Rik	ENSMUST00000140314	retained_intron		14	-1	70156918	1938
ENSMUSG00000026553	protein_coding	Copa	ENSMUST00000124289	nonsense_mediated_decay		1	1	172082805	1627
ENSMUSG00000044551	protein_coding	9930012K11Rik	ENSMUST00000129767	nonsense_mediated_decay		14	-1	70156467	538
ENSMUSG00000026553	protein_coding	Copa	ENSMUST00000126634	retained_intron		1	1	172082831	2534
ENSMUSG00000044551	protein_coding	9930012K11Rik	ENSMUST00000140152	retained_intron		14	-1	70156810	860
ENSMUSG00000026553	protein_coding	Copa	ENSMUST00000027833	protein_coding		1	1	172082832	4351
ENSMUSG00000026553	protein_coding	Copa	ENSMUST00000150298	processed_transcript		1	1	172095251	457
ENSMUSG00000030451	protein_coding	Herc2	ENSMUST00000205653	protein_coding		7	1	56050196	476
ENSMUSG00000026553	protein_coding	Copa	ENSMUST00000152403	nonsense_mediated_decay		1	1	172099736	657
ENSMUSG00000026553	protein_coding	Copa	ENSMUST00000133909	retained_intron		1	1	172112191	2505
ENSMUSG00000026553	protein_coding	Copa	ENSMUST00000122845	retained_intron		1	1	172114337	2578
ENSMUSG00000026553	protein_coding	Copa	ENSMUST00000142765	retained_intron		1	1	172118102	520
ENSMUSG00000032481	protein_coding	Smarcc1	ENSMUST00000088716	protein_coding	principal2	9	1	110131980	5717
ENSMUSG00000032481	protein_coding	Smarcc1	ENSMUST00000197480	protein_coding		9	1	110132037	1949
ENSMUSG00000046404	protein_coding	Yod1	ENSMUST00000049813	protein_coding	principal1	1	1	130717327	6128
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000169464	protein_coding	principal3	2	1	156613705	4851
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000109568	protein_coding		2	1	156700622	3256
ENSMUSG00000048100	protein_coding	Taf13	ENSMUST00000131814	processed_transcript		3	1	108571698	596
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000070782	protein_coding	alternative1	2	1	156700622	3303
ENSMUSG00000048100	protein_coding	Taf13	ENSMUST00000056292	processed_transcript		3	1	108571699	1655
ENSMUSG00000101904	protein_coding	Gm29427	ENSMUST00000188520	nonsense_mediated_decay	principal1	1	-1	130715799	1909
ENSMUSG00000100257	unprocessed_pseudogene	C4bp-ps1	ENSMUST00000189393	unprocessed_pseudogene		1	-1	130684071	706
ENSMUSG00000032481	protein_coding	Smarcc1	ENSMUST00000200237	retained_intron		9	1	110132037	3078
ENSMUSG00000032481	protein_coding	Smarcc1	ENSMUST00000197984	protein_coding	alternative2	9	1	110132037	3538
ENSMUSG00000032481	protein_coding	Smarcc1	ENSMUST00000199896	protein_coding	alternative2	9	1	110132037	5773
ENSMUSG00000048100	protein_coding	Taf13	ENSMUST00000143054	protein_coding	principal1	3	1	108571699	2443
ENSMUSG00000032481	protein_coding	Smarcc1	ENSMUST00000198667	retained_intron		9	1	110185732	1280
ENSMUSG00000048100	protein_coding	Taf13	ENSMUST00000139603	retained_intron		3	1	108571711	463
ENSMUSG00000032481	protein_coding	Smarcc1	ENSMUST00000198211	protein_coding		9	1	110234908	412
ENSMUSG00000034135	protein_coding	Sik3	ENSMUST00000126865	protein_coding	principal1	9	1	46012820	6287
ENSMUSG00000032481	protein_coding	Smarcc1	ENSMUST00000200426	retained_intron		9	1	110236394	998
ENSMUSG00000034135	protein_coding	Sik3	ENSMUST00000120463	protein_coding		9	1	46012864	4180
ENSMUSG00000034135	protein_coding	Sik3	ENSMUST00000120247	protein_coding		9	1	46013000	3657
ENSMUSG00000034135	protein_coding	Sik3	ENSMUST00000215954	retained_intron		9	1	46123130	2333
ENSMUSG00000060459	protein_coding	Kng2	ENSMUST00000115349	protein_coding	alternative2	16	-1	23029068	1577
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000037796	protein_coding	principal1	1	1	75435930	1539
ENSMUSG00000060459	protein_coding	Kng2	ENSMUST00000231872	protein_coding		16	-1	22999959	509
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000113584	protein_coding	principal1	1	1	75435943	1692
ENSMUSG00000034135	protein_coding	Sik3	ENSMUST00000122865	protein_coding		9	1	46123237	2330
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000145166	protein_coding		1	1	75435961	647
ENSMUSG00000060459	protein_coding	Kng2	ENSMUST00000039338	protein_coding	alternative2	16	-1	23029017	1591
ENSMUSG00000034135	protein_coding	Sik3	ENSMUST00000153152	processed_transcript		9	1	46155379	5465
ENSMUSG00000034135	protein_coding	Sik3	ENSMUST00000138338	protein_coding		9	1	46219571	227
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000143730	protein_coding		1	1	75435967	650
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000133418	protein_coding		1	1	75435968	918
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000144874	protein_coding		1	1	75435982	688
ENSMUSG00000060459	protein_coding	Kng2	ENSMUST00000100046	protein_coding	principal3	16	-1	23029101	2294
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000140287	protein_coding		1	1	75435984	828
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000131545	protein_coding		1	1	75436087	798
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000141124	protein_coding		1	1	75436113	564
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000188097	nonsense_mediated_decay		1	1	75436942	776
ENSMUSG00000060459	protein_coding	Kng2	ENSMUST00000160243	nonsense_mediated_decay		16	-1	23029009	1490
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000132291	retained_intron		1	1	75441620	549
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000135453	retained_intron		1	1	75442166	554
ENSMUSG00000033021	protein_coding	Gmppa	ENSMUST00000124539	retained_intron		1	1	75442224	790
ENSMUSG00000046942	protein_coding	Mageb16	ENSMUST00000114016	protein_coding	principal1	X	-1	79635582	1725
ENSMUSG00000060459	protein_coding	Kng2	ENSMUST00000232459	protein_coding		16	-1	23029482	742
ENSMUSG00000046942	protein_coding	Mageb16	ENSMUST00000052283	protein_coding	principal1	X	-1	79671435	1854
ENSMUSG00000060459	protein_coding	Kng2	ENSMUST00000231835	nonsense_mediated_decay		16	-1	23029392	533
ENSMUSG00000079388	protein_coding	2610042L04Rik	ENSMUST00000165466	protein_coding	principal1	14	1	4334763	1886
ENSMUSG00000079388	protein_coding	2610042L04Rik	ENSMUST00000112778	protein_coding	principal1	14	1	4339563	599
ENSMUSG00000092045	processed_pseudogene	Gm17086	ENSMUST00000171346	processed_pseudogene		14	-1	4363105	484
ENSMUSG00000110033	unprocessed_pseudogene	AC161520.1	ENSMUST00000210954	unprocessed_pseudogene		7	-1	103005197	939
ENSMUSG00000104415	TEC	Gm37069	ENSMUST00000192742	TEC		1	1	182494156	4142
ENSMUSG00000033762	protein_coding	Recql4	ENSMUST00000036852	protein_coding	principal1	15	-1	76710533	3896
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000137356	protein_coding		2	1	156720572	757
ENSMUSG00000081532	processed_pseudogene	Gm15781	ENSMUST00000120216	processed_pseudogene		6	1	149040980	323
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000131157	protein_coding		2	1	156721031	981
ENSMUSG00000033762	protein_coding	Recql4	ENSMUST00000230724	nonsense_mediated_decay		15	-1	76710548	3592
ENSMUSG00000033762	protein_coding	Recql4	ENSMUST00000230544	protein_coding		15	-1	76710467	3984
ENSMUSG00000033762	protein_coding	Recql4	ENSMUST00000229360	retained_intron		15	-1	76710210	503
ENSMUSG00000019080	protein_coding	Mfsd3	ENSMUST00000019224	protein_coding	principal1	15	1	76701465	2246
ENSMUSG00000019080	protein_coding	Mfsd3	ENSMUST00000229098	processed_transcript		15	1	76702006	378
ENSMUSG00000019080	protein_coding	Mfsd3	ENSMUST00000229018	retained_intron		15	1	76702434	477
ENSMUSG00000019080	protein_coding	Mfsd3	ENSMUST00000230468	processed_transcript		15	1	76703099	299
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000109566	protein_coding		2	1	156721045	1595
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000127944	retained_intron		2	1	156721046	4083
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000146412	protein_coding		2	1	156721057	1180
ENSMUSG00000005371	protein_coding	Fbxo11	ENSMUST00000130379	protein_coding	principal1	17	-1	88065028	3753
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000177013	protein_coding		2	1	156721060	616
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000171030	protein_coding		2	1	156721062	1281
ENSMUSG00000116207	protein_coding	Nnt	ENSMUST00000223268	protein_coding	principal1	13	-1	119408952	3339
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000000094	protein_coding		2	1	156721070	1411
ENSMUSG00000005371	protein_coding	Fbxo11	ENSMUST00000005504	protein_coding		17	-1	88065291	4019
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000099145	protein_coding	alternative1	2	1	156721492	3402
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000123730	processed_transcript		2	1	156759945	388
ENSMUSG00000005371	protein_coding	Fbxo11	ENSMUST00000135639	nonsense_mediated_decay		17	-1	88008696	2022
ENSMUSG00000061689	protein_coding	Dlgap4	ENSMUST00000109567	protein_coding	alternative1	2	1	156613705	4840
ENSMUSG00000005371	protein_coding	Fbxo11	ENSMUST00000235112	protein_coding	principal1	17	-1	88065243	2657
ENSMUSG00000086638	processed_transcript	4930405A21Rik	ENSMUST00000139042	processed_transcript		2	-1	156720909	994
ENSMUSG00000030313	protein_coding	Dennd5b	ENSMUST00000111557	protein_coding	principal1	6	-1	149101680	9831
ENSMUSG00000005371	protein_coding	Fbxo11	ENSMUST00000127334	retained_intron		17	-1	88000982	889
ENSMUSG00000086638	processed_transcript	4930405A21Rik	ENSMUST00000130089	retained_intron		2	-1	156720826	544
ENSMUSG00000005371	protein_coding	Fbxo11	ENSMUST00000235056	protein_coding		17	-1	88064887	371
ENSMUSG00000030313	protein_coding	Dennd5b	ENSMUST00000129539	retained_intron		6	-1	149017188	595
ENSMUSG00000026509	protein_coding	Capn2	ENSMUST00000068505	protein_coding	principal1	1	-1	182517524	3225
ENSMUSG00000083498	processed_pseudogene	Gm14172	ENSMUST00000118255	processed_pseudogene		2	-1	156633468	644
ENSMUSG00000002504	protein_coding	Slc9a3r2	ENSMUST00000019684	protein_coding		17	-1	24644990	1717
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000117901	protein_coding		X	-1	101419798	5178
ENSMUSG00000087508	lincRNA	Gm14174	ENSMUST00000153158	lincRNA		2	-1	156615448	161
ENSMUSG00000030313	protein_coding	Dennd5b	ENSMUST00000150436	retained_intron		6	-1	149101538	3160
ENSMUSG00000030313	protein_coding	Dennd5b	ENSMUST00000204583	retained_intron		6	-1	149042873	4779
ENSMUSG00000002504	protein_coding	Slc9a3r2	ENSMUST00000234557	protein_coding		17	-1	24650289	2035
ENSMUSG00000030313	protein_coding	Dennd5b	ENSMUST00000145555	protein_coding		6	-1	149081295	650
ENSMUSG00000002504	protein_coding	Slc9a3r2	ENSMUST00000002572	protein_coding	principal1	17	-1	24650327	2136
ENSMUSG00000030313	protein_coding	Dennd5b	ENSMUST00000127727	protein_coding		6	-1	149101584	715
ENSMUSG00000026509	protein_coding	Capn2	ENSMUST00000194940	retained_intron		1	-1	182479807	580
ENSMUSG00000030313	protein_coding	Dennd5b	ENSMUST00000204030	retained_intron		6	-1	149085363	2979
ENSMUSG00000026509	protein_coding	Capn2	ENSMUST00000194961	retained_intron		1	-1	182481494	728
ENSMUSG00000002504	protein_coding	Slc9a3r2	ENSMUST00000234121	protein_coding		17	-1	24647826	1840
ENSMUSG00000082633	processed_pseudogene	Gm15779	ENSMUST00000117470	processed_pseudogene		6	1	149003915	412
ENSMUSG00000002504	protein_coding	Slc9a3r2	ENSMUST00000234912	processed_transcript		17	-1	24650013	1420
ENSMUSG00000107970	TEC	Gm49058	ENSMUST00000204155	TEC		6	-1	149053848	2724
ENSMUSG00000002504	protein_coding	Slc9a3r2	ENSMUST00000234505	protein_coding		17	-1	24644957	1137
ENSMUSG00000082829	processed_pseudogene	Gm15780	ENSMUST00000121283	processed_pseudogene		6	1	149072704	935
ENSMUSG00000002504	protein_coding	Slc9a3r2	ENSMUST00000235042	retained_intron		17	-1	24649993	874
ENSMUSG00000026509	protein_coding	Capn2	ENSMUST00000192230	retained_intron		1	-1	182492561	2366
ENSMUSG00000026509	protein_coding	Capn2	ENSMUST00000192483	retained_intron		1	-1	182517608	3017
ENSMUSG00000071711	protein_coding	Mpst	ENSMUST00000229791	protein_coding		15	1	78406416	522
ENSMUSG00000097304	processed_pseudogene	Rpl31-ps15	ENSMUST00000181857	processed_pseudogene		3	1	37734730	375
ENSMUSG00000005370	protein_coding	Msh6	ENSMUST00000005503	protein_coding	principal1	17	1	87975062	4251
ENSMUSG00000102234	antisense	Gm37885	ENSMUST00000192568	antisense		1	1	182484179	1391
ENSMUSG00000102234	antisense	Gm37885	ENSMUST00000195868	antisense		1	1	182490029	685
ENSMUSG00000005370	protein_coding	Msh6	ENSMUST00000234936	processed_transcript		17	1	87975095	479
ENSMUSG00000106441	lincRNA	Gm42921	ENSMUST00000196670	lincRNA		3	1	37761037	655
ENSMUSG00000005370	protein_coding	Msh6	ENSMUST00000234756	protein_coding		17	1	87979703	578
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000121520	protein_coding	alternative2	X	-1	101419914	5564
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000120107	protein_coding	alternative2	X	-1	101420716	5882
ENSMUSG00000070464	protein_coding	Ccl26	ENSMUST00000094226	protein_coding	principal1	5	-1	135563569	282
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000063577	protein_coding	principal2	X	-1	101420849	6057
ENSMUSG00000095407	protein_coding	Tmem200c	ENSMUST00000233019	protein_coding		17	1	68826623	448
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000155040	processed_transcript		X	-1	101409734	431
ENSMUSG00000095407	protein_coding	Tmem200c	ENSMUST00000178545	protein_coding	principal1	17	1	68837136	3214
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000129586	retained_intron		X	-1	101414919	944
ENSMUSG00000106621	TEC	Gm42752	ENSMUST00000198394	TEC		3	1	37838468	1106
ENSMUSG00000071711	protein_coding	Mpst	ENSMUST00000043865	protein_coding	principal1	15	1	78406775	1753
ENSMUSG00000117004	antisense	Gm38593	ENSMUST00000232811	antisense		17	-1	68837226	638
ENSMUSG00000105252	TEC	Gm42753	ENSMUST00000196718	TEC		3	1	37841798	1268
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000137416	processed_transcript		X	-1	101417477	1186
ENSMUSG00000082372	processed_pseudogene	Gm4772	ENSMUST00000122221	processed_pseudogene		X	-1	79903566	843
ENSMUSG00000071711	protein_coding	Mpst	ENSMUST00000231159	protein_coding		15	1	78406801	597
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000129545	retained_intron		X	-1	101415166	448
ENSMUSG00000071711	protein_coding	Mpst	ENSMUST00000229739	protein_coding	principal1	15	1	78409982	1311
ENSMUSG00000106078	TEC	Gm43697	ENSMUST00000199637	TEC		3	-1	129225528	2581
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000141895	retained_intron		X	-1	101417376	1773
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000120201	protein_coding		X	-1	101419809	1859
ENSMUSG00000071711	protein_coding	Mpst	ENSMUST00000167140	protein_coding	principal1	15	1	78406712	1279
ENSMUSG00000071711	protein_coding	Mpst	ENSMUST00000169133	protein_coding	principal1	15	1	78406801	1309
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000034834	protein_coding	principal3	9	1	59656368	2432
ENSMUSG00000090300	transcribed_processed_pseudogene	Gm17119	ENSMUST00000163943	transcribed_processed_pseudogene		3	1	14564402	280
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000163694	protein_coding	alternative1	9	1	59656573	2041
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000117637	protein_coding		X	-1	101419841	1593
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000171479	protein_coding	alternative2	1	-1	130714575	3342
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000121429	protein_coding		X	-1	101420685	1890
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000214571	retained_intron		9	1	59656576	2113
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000215623	protein_coding		9	1	59656589	725
ENSMUSG00000025453	protein_coding	Nnt	ENSMUST00000069902	protein_coding	alternative2	13	-1	119408997	3122
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000118092	protein_coding		X	-1	101420216	1502
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000185233	nonsense_mediated_decay		1	-1	130715814	4505
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000215660	protein_coding		9	1	59656598	743
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000187522	retained_intron		1	-1	130692245	3057
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000217353	protein_coding		9	1	59656659	582
ENSMUSG00000025453	protein_coding	Nnt	ENSMUST00000099149	protein_coding	principal2	13	-1	119408997	3464
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000119699	protein_coding		X	-1	101420364	1750
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000129561	retained_intron		X	-1	101417373	1180
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000216620	protein_coding		9	1	59657238	356
ENSMUSG00000025453	protein_coding	Nnt	ENSMUST00000109204	protein_coding		13	-1	119408997	3198
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000189534	protein_coding	alternative2	1	-1	130729253	2454
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000217038	protein_coding		9	1	59657240	625
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000147017	processed_transcript		X	-1	101419829	524
ENSMUSG00000025453	protein_coding	Nnt	ENSMUST00000133627	retained_intron		13	-1	119408997	2340
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000143159	retained_intron		X	-1	101417690	665
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000213930	protein_coding		9	1	59658243	1017
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000189167	protein_coding		1	-1	130714575	1558
ENSMUSG00000025453	protein_coding	Nnt	ENSMUST00000144599	retained_intron		13	-1	119408997	1885
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000216857	protein_coding		9	1	59664802	718
ENSMUSG00000031310	protein_coding	Zmym3	ENSMUST00000134005	protein_coding		X	-1	101419860	517
ENSMUSG00000032294	protein_coding	Pkm	ENSMUST00000213220	retained_intron		9	1	59671586	747
ENSMUSG00000110143	unprocessed_pseudogene	Olfr580-ps1	ENSMUST00000210528	unprocessed_pseudogene		7	-1	103014490	943
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000187089	protein_coding	alternative2	1	-1	130714576	1690
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000191347	protein_coding	alternative2	1	-1	130714576	1759
ENSMUSG00000109845	unprocessed_pseudogene	Olfr581-ps1	ENSMUST00000209214	unprocessed_pseudogene		7	1	103029093	556
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000169659	protein_coding	principal3	1	-1	130715778	2849
ENSMUSG00000111379	lincRNA	Gm48346	ENSMUST00000217574	lincRNA		9	1	54043312	3200
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000050406	protein_coding	alternative2	1	-1	130714575	1701
ENSMUSG00000074345	protein_coding	Tnfaip8l3	ENSMUST00000098760	protein_coding	principal1	9	-1	54068388	4403
ENSMUSG00000095056	protein_coding	Gm3159	ENSMUST00000164038	protein_coding	alternative2	14	1	4397526	997
ENSMUSG00000095056	protein_coding	Gm3159	ENSMUST00000167245	protein_coding	principal5	14	1	4397545	1797
ENSMUSG00000074345	protein_coding	Tnfaip8l3	ENSMUST00000214656	processed_transcript		9	-1	54068372	336
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000062368	protein_coding		9	-1	110101087	3806
ENSMUSG00000110854	processed_pseudogene	Gm48345	ENSMUST00000215555	processed_pseudogene		9	1	54046615	169
ENSMUSG00000095056	protein_coding	Gm3159	ENSMUST00000177764	protein_coding	alternative2	14	1	4397589	618
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000186867	nonsense_mediated_decay		1	-1	130714575	2223
ENSMUSG00000052676	protein_coding	Zmat1	ENSMUST00000113185	protein_coding		X	-1	135009185	3378
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000100334	protein_coding		2	1	25054355	2957
ENSMUSG00000027489	protein_coding	Necab3	ENSMUST00000109716	protein_coding	alternative2	2	-1	154558851	1742
ENSMUSG00000052676	protein_coding	Zmat1	ENSMUST00000151252	processed_transcript		X	-1	134981434	3038
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000191301	nonsense_mediated_decay		1	-1	130714575	1639
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000152122	protein_coding		2	1	25054373	858
ENSMUSG00000052676	protein_coding	Zmat1	ENSMUST00000141849	retained_intron		X	-1	134978628	2231
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000186777	nonsense_mediated_decay		1	-1	130717238	768
ENSMUSG00000052676	protein_coding	Zmat1	ENSMUST00000064659	protein_coding	principal1	X	-1	135009209	3501
ENSMUSG00000089859	protein_coding	Olfr1565	ENSMUST00000214797	protein_coding	principal1	2	1	90322200	2340
ENSMUSG00000026409	protein_coding	Pfkfb2	ENSMUST00000066863	protein_coding	principal3	1	-1	130715734	4425
ENSMUSG00000007589	protein_coding	Tinf2	ENSMUST00000226819	protein_coding		14	-1	55680075	435
ENSMUSG00000089859	protein_coding	Olfr1565	ENSMUST00000216915	processed_transcript		2	1	90324198	563
ENSMUSG00000027489	protein_coding	Necab3	ENSMUST00000000895	protein_coding	principal2	2	-1	154558866	1829
ENSMUSG00000089859	protein_coding	Olfr1565	ENSMUST00000077123	protein_coding	principal1	2	1	90324197	930
ENSMUSG00000104515	TEC	Gm37163	ENSMUST00000195439	TEC		1	-1	130728821	1690
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000006646	protein_coding	principal3	2	1	25054384	2922
ENSMUSG00000027489	protein_coding	Necab3	ENSMUST00000130824	retained_intron		2	-1	154546794	531
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000141866	retained_intron		2	1	25054403	1571
ENSMUSG00000027489	protein_coding	Necab3	ENSMUST00000125793	protein_coding		2	-1	154558890	556
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000155909	retained_intron		2	1	25054407	364
ENSMUSG00000073961	protein_coding	Olfr582	ENSMUST00000211036	protein_coding	principal1	7	1	103038024	1849
ENSMUSG00000073961	protein_coding	Olfr582	ENSMUST00000210119	protein_coding	principal1	7	1	103038043	1787
ENSMUSG00000027489	protein_coding	Necab3	ENSMUST00000124382	processed_transcript		2	-1	154558844	470
ENSMUSG00000073961	protein_coding	Olfr582	ENSMUST00000214021	protein_coding	principal1	7	1	103038043	3108
ENSMUSG00000027489	protein_coding	Necab3	ENSMUST00000135530	retained_intron		2	-1	154558852	730
ENSMUSG00000073961	protein_coding	Olfr582	ENSMUST00000098212	protein_coding		7	1	103041481	960
ENSMUSG00000027489	protein_coding	Necab3	ENSMUST00000149725	retained_intron		2	-1	154557279	435
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000032994	protein_coding	principal1	7	-1	126377450	2219
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000102931	protein_coding		2	1	25054413	2830
ENSMUSG00000038523	protein_coding	1700003F12Rik	ENSMUST00000135641	retained_intron		2	1	154547085	683
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000074422	protein_coding		2	1	25054413	2824
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000132172	protein_coding		2	1	25054425	427
ENSMUSG00000025461	protein_coding	Cd163l1	ENSMUST00000211540	retained_intron		7	1	140218267	3621
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000198425	protein_coding		9	-1	110117422	3968
ENSMUSG00000038523	protein_coding	1700003F12Rik	ENSMUST00000045116	protein_coding	principal2	2	1	154548888	704
ENSMUSG00000007589	protein_coding	Tinf2	ENSMUST00000227842	protein_coding	alternative2	14	-1	55681745	2001
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000114388	protein_coding	alternative1	2	1	25054435	2781
ENSMUSG00000038523	protein_coding	1700003F12Rik	ENSMUST00000109709	protein_coding	alternative2	2	1	154548927	704
ENSMUSG00000007589	protein_coding	Tinf2	ENSMUST00000227996	retained_intron		14	-1	55681119	3374
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000140737	protein_coding		2	1	25054456	862
ENSMUSG00000091418	protein_coding	Gm3164	ENSMUST00000168866	protein_coding	principal1	14	1	4415448	1945
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000126810	retained_intron		7	-1	126377411	3251
ENSMUSG00000007589	protein_coding	Tinf2	ENSMUST00000228264	retained_intron		14	-1	55681786	3130
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000199529	protein_coding	principal1	9	-1	110117433	4373
ENSMUSG00000091148	protein_coding	Gm3182	ENSMUST00000169364	protein_coding	alternative2	14	1	4481745	997
ENSMUSG00000025461	protein_coding	Cd163l1	ENSMUST00000209398	protein_coding	alternative2	7	1	140218281	3437
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000119846	protein_coding		7	-1	126377411	2017
ENSMUSG00000091148	protein_coding	Gm3182	ENSMUST00000167902	protein_coding	principal5	14	1	4481808	1753
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000144520	nonsense_mediated_decay		2	1	25054468	2466
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000138141	nonsense_mediated_decay		7	-1	126377411	2152
ENSMUSG00000007589	protein_coding	Tinf2	ENSMUST00000007733	protein_coding	principal2	14	-1	55681820	2956
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113705	protein_coding	alternative1	9	-1	67049267	1759
ENSMUSG00000025461	protein_coding	Cd163l1	ENSMUST00000209637	protein_coding	principal2	7	1	140218511	3210
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000114386	protein_coding		2	1	25054468	2685
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000119754	protein_coding		7	-1	126377411	2001
ENSMUSG00000079392	processed_pseudogene	Gm17170	ENSMUST00000112785	processed_pseudogene		14	-1	4451970	316
ENSMUSG00000025461	protein_coding	Cd163l1	ENSMUST00000210159	retained_intron		7	1	140218541	3116
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000135328	retained_intron		2	1	25055880	504
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000205930	protein_coding		7	-1	126377029	787
ENSMUSG00000025461	protein_coding	Cd163l1	ENSMUST00000209376	retained_intron		7	1	140218541	3140
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000134744	protein_coding		2	1	25057147	1959
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000137263	retained_intron		7	-1	126372919	821
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000197928	protein_coding	principal1	9	-1	110117830	4441
ENSMUSG00000025461	protein_coding	Cd163l1	ENSMUST00000209840	retained_intron		7	1	140224943	626
ENSMUSG00000079386	protein_coding	Gm3173	ENSMUST00000112776	protein_coding	principal5	14	1	4514758	519
ENSMUSG00000007589	protein_coding	Tinf2	ENSMUST00000226641	retained_intron		14	-1	55681791	1275
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000140733	retained_intron		2	1	25057576	854
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000152506	retained_intron		2	1	25060136	581
ENSMUSG00000007589	protein_coding	Tinf2	ENSMUST00000226314	protein_coding		14	-1	55681775	787
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000205366	nonsense_mediated_decay		7	-1	126377095	1100
ENSMUSG00000025461	protein_coding	Cd163l1	ENSMUST00000084460	protein_coding	principal2	7	1	140218267	3454
ENSMUSG00000079386	protein_coding	Gm3173	ENSMUST00000166848	protein_coding	alternative2	14	1	4430992	396
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000199332	protein_coding		9	-1	110084991	368
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000152000	retained_intron		7	-1	126372562	435
ENSMUSG00000079386	protein_coding	Gm3173	ENSMUST00000164603	protein_coding	alternative2	14	1	4430992	519
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000124309	retained_intron		2	1	25060829	456
ENSMUSG00000007589	protein_coding	Tinf2	ENSMUST00000227873	protein_coding		14	-1	55681804	670
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000150476	protein_coding		7	-1	126377207	867
ENSMUSG00000007589	protein_coding	Tinf2	ENSMUST00000228683	retained_intron		14	-1	55681719	674
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000199693	protein_coding		9	-1	110085050	515
ENSMUSG00000083852	processed_pseudogene	Gm13007	ENSMUST00000121866	processed_pseudogene		4	1	135997523	365
ENSMUSG00000028174	protein_coding	Rpe65	ENSMUST00000196999	protein_coding	principal1	3	1	159599175	1863
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000150748	retained_intron		7	-1	126374363	619
ENSMUSG00000002326	protein_coding	Gmpr2	ENSMUST00000226735	retained_intron		14	1	55671941	1658
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000206094	processed_transcript		7	-1	126376728	829
ENSMUSG00000028174	protein_coding	Rpe65	ENSMUST00000197771	nonsense_mediated_decay		3	1	159599218	640
ENSMUSG00000073960	protein_coding	Olfr583	ENSMUST00000098211	protein_coding	principal1	7	1	103051300	960
ENSMUSG00000030741	protein_coding	Spns1	ENSMUST00000206377	processed_transcript		7	-1	126377421	346
ENSMUSG00000028174	protein_coding	Rpe65	ENSMUST00000029824	protein_coding	principal1	3	1	159599233	1602
ENSMUSG00000059811	protein_coding	Atl2	ENSMUST00000068282	protein_coding	principal1	17	-1	79896123	3618
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000198026	retained_intron		9	-1	110109995	4574
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000196171	protein_coding		9	-1	110117437	3885
ENSMUSG00000089759	processed_transcript	3632454L22Rik	ENSMUST00000155136	processed_transcript		X	-1	135036602	1892
ENSMUSG00000006476	protein_coding	Nsmf	ENSMUST00000116574	protein_coding		2	1	25054379	2863
ENSMUSG00000089759	processed_transcript	3632454L22Rik	ENSMUST00000153610	processed_transcript		X	-1	135036148	2872
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000111991	protein_coding	principal1	9	-1	110117411	3829
ENSMUSG00000085547	unprocessed_pseudogene	Gm13767	ENSMUST00000124074	unprocessed_pseudogene		2	-1	90383161	876
ENSMUSG00000023987	protein_coding	Pgc	ENSMUST00000024782	protein_coding	principal1	17	1	47726842	1388
ENSMUSG00000089759	processed_transcript	3632454L22Rik	ENSMUST00000142907	processed_transcript		X	-1	135060336	2409
ENSMUSG00000059811	protein_coding	Atl2	ENSMUST00000223273	retained_intron		17	-1	79856130	3968
ENSMUSG00000023987	protein_coding	Pgc	ENSMUST00000144955	protein_coding		17	1	47726844	490
ENSMUSG00000059811	protein_coding	Atl2	ENSMUST00000221286	retained_intron		17	-1	79854602	3922
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000200066	protein_coding	principal1	9	-1	110117335	4623
ENSMUSG00000059811	protein_coding	Atl2	ENSMUST00000222193	nonsense_mediated_decay		17	-1	79896051	2902
ENSMUSG00000073959	protein_coding	Olfr584	ENSMUST00000214215	protein_coding	principal1	7	1	103081885	3152
ENSMUSG00000081146	transcribed_unprocessed_pseudogene	Gm6207	ENSMUST00000120075	transcribed_unprocessed_pseudogene		X	-1	135122984	1386
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000200593	protein_coding		9	-1	110085515	716
ENSMUSG00000073959	protein_coding	Olfr584	ENSMUST00000098210	protein_coding		7	1	103085516	964
ENSMUSG00000059811	protein_coding	Atl2	ENSMUST00000222415	protein_coding		17	-1	79852755	458
ENSMUSG00000085556	processed_transcript	Gm15020	ENSMUST00000147142	processed_transcript		X	-1	135152596	636
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000196914	retained_intron		9	-1	110087454	473
ENSMUSG00000059811	protein_coding	Atl2	ENSMUST00000221666	retained_intron		17	-1	79854057	866
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000196182	retained_intron		9	-1	110091471	816
ENSMUSG00000059811	protein_coding	Atl2	ENSMUST00000222243	retained_intron		17	-1	79896111	2849
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000200029	retained_intron		9	-1	110110596	4241
ENSMUSG00000002326	protein_coding	Gmpr2	ENSMUST00000002397	protein_coding	principal1	14	1	55672235	1993
ENSMUSG00000078080	protein_coding	Olfr585	ENSMUST00000104881	protein_coding	principal1	7	1	103097720	1030
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000198443	nonsense_mediated_decay		9	-1	110101039	659
ENSMUSG00000002326	protein_coding	Gmpr2	ENSMUST00000226787	retained_intron		14	1	55672258	1807
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000199835	protein_coding		9	-1	110116784	810
ENSMUSG00000002326	protein_coding	Gmpr2	ENSMUST00000227178	protein_coding		14	1	55672380	625
ENSMUSG00000086728	antisense	Man2c1os	ENSMUST00000125333	antisense		9	-1	57131290	1910
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000196455	protein_coding		9	-1	110101038	404
ENSMUSG00000002326	protein_coding	Gmpr2	ENSMUST00000227914	protein_coding		14	1	55672383	773
ENSMUSG00000086728	antisense	Man2c1os	ENSMUST00000162738	antisense		9	-1	57130898	452
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000196497	protein_coding		9	-1	110115306	533
ENSMUSG00000002326	protein_coding	Gmpr2	ENSMUST00000227696	retained_intron		14	1	55676957	545
ENSMUSG00000059811	protein_coding	Atl2	ENSMUST00000112437	protein_coding		17	-1	79896123	3371
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000200476	protein_coding		9	-1	110117087	706
ENSMUSG00000086728	antisense	Man2c1os	ENSMUST00000142077	antisense		9	-1	57131244	841
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000197182	protein_coding		9	-1	110117419	458
ENSMUSG00000079432	protein_coding	Gm15023	ENSMUST00000113183	protein_coding	principal1	X	-1	135177632	3698
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000197785	processed_transcript		9	-1	110117431	420
ENSMUSG00000097995	sense_intronic	Gm24362	ENSMUST00000183220	sense_intronic		4	-1	136018486	416
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000196788	retained_intron		9	-1	110117374	1424
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000199801	processed_transcript		9	-1	110117632	614
ENSMUSG00000085714	antisense	Gm13008	ENSMUST00000142289	antisense		4	1	136003566	507
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000198843	processed_transcript		9	-1	110117108	431
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000197979	processed_transcript		9	-1	110117385	198
ENSMUSG00000020286	protein_coding	1700093K21Rik	ENSMUST00000020527	protein_coding	alternative2	11	-1	23519223	1030
ENSMUSG00000032480	protein_coding	Dhx30	ENSMUST00000165596	protein_coding		9	-1	110115077	3726
ENSMUSG00000031409	protein_coding	Tceal6	ENSMUST00000033783	protein_coding	principal1	X	-1	135210687	1114
ENSMUSG00000020286	protein_coding	1700093K21Rik	ENSMUST00000140122	protein_coding		11	-1	23519942	634
ENSMUSG00000020286	protein_coding	1700093K21Rik	ENSMUST00000156629	protein_coding		11	-1	23521155	812
ENSMUSG00000081709	processed_pseudogene	Gm15022	ENSMUST00000122074	processed_pseudogene		X	1	135240154	746
ENSMUSG00000020286	protein_coding	1700093K21Rik	ENSMUST00000239488	protein_coding	principal2	11	-1	23519195	1002
ENSMUSG00000010376	protein_coding	Nedd8	ENSMUST00000010520	protein_coding	principal1	14	-1	55672124	824
ENSMUSG00000020286	protein_coding	1700093K21Rik	ENSMUST00000169264	protein_coding	principal2	11	-1	23519942	1320
ENSMUSG00000010376	protein_coding	Nedd8	ENSMUST00000227250	protein_coding		14	-1	55663861	412
ENSMUSG00000010376	protein_coding	Nedd8	ENSMUST00000228414	processed_transcript		14	-1	55671877	516
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000239074	protein_coding	alternative2	9	-1	86880439	4318
ENSMUSG00000082071	unprocessed_pseudogene	Pramel	ENSMUST00000118979	unprocessed_pseudogene		X	1	135270853	1383
ENSMUSG00000010376	protein_coding	Nedd8	ENSMUST00000227157	retained_intron		14	-1	55664296	791
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000098495	protein_coding	principal4	9	-1	86880439	4150
ENSMUSG00000028668	protein_coding	Eloa	ENSMUST00000030427	protein_coding	principal1	4	-1	136021763	4708
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000161393	nonsense_mediated_decay		9	1	57130690	545
ENSMUSG00000010376	protein_coding	Nedd8	ENSMUST00000163750	protein_coding	principal1	14	-1	55671873	514
ENSMUSG00000115854	lincRNA	Gm36644	ENSMUST00000229780	lincRNA		15	-1	78424193	343
ENSMUSG00000099923	antisense	1700105P06Rik	ENSMUST00000186160	antisense		19	1	7382537	1025
ENSMUSG00000067360	protein_coding	Pramel3	ENSMUST00000118821	protein_coding	alternative2	X	1	135302307	3698
ENSMUSG00000067360	protein_coding	Pramel3	ENSMUST00000113176	protein_coding	principal2	X	1	135302316	3673
ENSMUSG00000022698	protein_coding	Naa50	ENSMUST00000159514	protein_coding		16	1	44139830	3756
ENSMUSG00000024970	protein_coding	Spindoc	ENSMUST00000237653	protein_coding		19	-1	7374817	949
ENSMUSG00000022698	protein_coding	Naa50	ENSMUST00000161326	protein_coding	alternative1	16	1	44139853	4487
ENSMUSG00000087428	processed_transcript	Gm15017	ENSMUST00000141989	processed_transcript		X	1	135329761	632
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000190388	retained_intron		9	-1	86808741	5356
ENSMUSG00000095599	transcribed_processed_pseudogene	Gm6215	ENSMUST00000119297	transcribed_processed_pseudogene		X	1	135349021	1386
ENSMUSG00000024970	protein_coding	Spindoc	ENSMUST00000025924	protein_coding	principal1	19	-1	7382994	3152
ENSMUSG00000024970	protein_coding	Spindoc	ENSMUST00000235678	protein_coding		19	-1	7374337	426
ENSMUSG00000022698	protein_coding	Naa50	ENSMUST00000063520	protein_coding	principal3	16	1	44139886	3557
ENSMUSG00000024970	protein_coding	Spindoc	ENSMUST00000236817	retained_intron		19	-1	7382921	1477
ENSMUSG00000117743	antisense	Gm50232	ENSMUST00000235544	antisense		19	1	7364515	1404
ENSMUSG00000022698	protein_coding	Naa50	ENSMUST00000063542	protein_coding		16	1	44139892	2136
ENSMUSG00000085415	processed_transcript	Selenok-ps1	ENSMUST00000125204	processed_transcript		11	-1	23558842	785
ENSMUSG00000095690	processed_pseudogene	Rab11b-ps2	ENSMUST00000178377	processed_pseudogene		19	-1	7399077	654
ENSMUSG00000106461	lincRNA	Gm20755	ENSMUST00000196893	lincRNA		3	1	37898813	1827
ENSMUSG00000118297	processed_pseudogene	Gm18842	ENSMUST00000235684	processed_pseudogene		19	-1	7403431	598
ENSMUSG00000105099	TEC	Gm42751	ENSMUST00000198065	TEC		3	1	37982792	559
ENSMUSG00000097613	antisense	Gm17597	ENSMUST00000181220	antisense		15	-1	81802613	1115
ENSMUSG00000087457	processed_pseudogene	Gm7799	ENSMUST00000133080	processed_pseudogene		3	-1	37960087	476
ENSMUSG00000032482	protein_coding	Cspg5	ENSMUST00000035058	protein_coding	principal2	9	1	110243783	3870
ENSMUSG00000032482	protein_coding	Cspg5	ENSMUST00000196060	protein_coding		9	1	110243783	3790
ENSMUSG00000032482	protein_coding	Cspg5	ENSMUST00000196176	retained_intron		9	1	110245483	1523
ENSMUSG00000032482	protein_coding	Cspg5	ENSMUST00000197850	protein_coding	alternative2	9	1	110245531	7868
ENSMUSG00000002981	protein_coding	Clptm1	ENSMUST00000055242	protein_coding	principal1	7	-1	19665033	4143
ENSMUSG00000032482	protein_coding	Cspg5	ENSMUST00000199736	protein_coding		9	1	110246065	2107
ENSMUSG00000104988	TEC	Gm43622	ENSMUST00000200140	TEC		9	-1	110254144	2019
ENSMUSG00000105484	lincRNA	Gm42775	ENSMUST00000198407	lincRNA		9	-1	110293937	740
ENSMUSG00000022389	protein_coding	Tef	ENSMUST00000109553	protein_coding	principal1	15	1	81802421	4403
ENSMUSG00000022389	protein_coding	Tef	ENSMUST00000166302	processed_transcript		15	1	81802707	640
ENSMUSG00000022389	protein_coding	Tef	ENSMUST00000170027	processed_transcript		15	1	81802730	492
ENSMUSG00000022389	protein_coding	Tef	ENSMUST00000164673	retained_intron		15	1	81802737	2219
ENSMUSG00000022389	protein_coding	Tef	ENSMUST00000169952	processed_transcript		15	1	81802826	441
ENSMUSG00000022389	protein_coding	Tef	ENSMUST00000168200	protein_coding		15	1	81811046	477
ENSMUSG00000002981	protein_coding	Clptm1	ENSMUST00000208554	retained_intron		7	-1	19665030	4819
ENSMUSG00000022389	protein_coding	Tef	ENSMUST00000023024	protein_coding		15	1	81811414	4079
ENSMUSG00000002981	protein_coding	Clptm1	ENSMUST00000208846	retained_intron		7	-1	19665021	3107
ENSMUSG00000022389	protein_coding	Tef	ENSMUST00000172208	protein_coding		15	1	81812159	399
ENSMUSG00000002981	protein_coding	Clptm1	ENSMUST00000207704	retained_intron		7	-1	19636177	962
ENSMUSG00000022389	protein_coding	Tef	ENSMUST00000167138	processed_transcript		15	1	81820593	248
ENSMUSG00000002981	protein_coding	Clptm1	ENSMUST00000208868	retained_intron		7	-1	19637746	717
ENSMUSG00000022389	protein_coding	Tef	ENSMUST00000168632	retained_intron		15	1	81820943	791
ENSMUSG00000002981	protein_coding	Clptm1	ENSMUST00000208215	processed_transcript		7	-1	19665006	372
ENSMUSG00000002981	protein_coding	Clptm1	ENSMUST00000208174	processed_transcript		7	-1	19664955	260
ENSMUSG00000002981	protein_coding	Clptm1	ENSMUST00000208599	processed_transcript		7	-1	19664955	369
ENSMUSG00000002981	protein_coding	Clptm1	ENSMUST00000208594	retained_intron		7	-1	19665016	358
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000074501	protein_coding	alternative2	9	-1	86880414	2577
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000190089	retained_intron		9	-1	86798699	742
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000189004	retained_intron		9	-1	86798873	345
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000189762	processed_transcript		9	-1	86829323	452
ENSMUSG00000032120	protein_coding	C2cd2l	ENSMUST00000065080	protein_coding	principal1	9	-1	44320285	4337
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000167014	retained_intron		9	-1	86880654	3061
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000191290	protein_coding		9	-1	86880397	765
ENSMUSG00000032120	protein_coding	C2cd2l	ENSMUST00000216222	nonsense_mediated_decay		9	-1	44317666	3366
ENSMUSG00000032120	protein_coding	C2cd2l	ENSMUST00000213160	protein_coding		9	-1	44314949	1059
ENSMUSG00000032120	protein_coding	C2cd2l	ENSMUST00000213689	retained_intron		9	-1	44314455	757
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000036347	protein_coding	alternative2	9	-1	86880449	4237
ENSMUSG00000032120	protein_coding	C2cd2l	ENSMUST00000213298	retained_intron		9	-1	44313839	368
ENSMUSG00000033419	protein_coding	Snap91	ENSMUST00000074468	protein_coding	alternative2	9	-1	86880449	4336
ENSMUSG00000032120	protein_coding	C2cd2l	ENSMUST00000214602	protein_coding		9	-1	44320252	2808
ENSMUSG00000103891	TEC	Gm37941	ENSMUST00000192170	TEC		9	-1	86786855	2309
ENSMUSG00000111874	lincRNA	Gm36539	ENSMUST00000217543	lincRNA		9	-1	87006163	497
ENSMUSG00000032120	protein_coding	C2cd2l	ENSMUST00000216855	retained_intron		9	-1	44315287	646
ENSMUSG00000032120	protein_coding	C2cd2l	ENSMUST00000214915	retained_intron		9	-1	44316154	744
ENSMUSG00000032120	protein_coding	C2cd2l	ENSMUST00000213818	retained_intron		9	-1	44316873	667
ENSMUSG00000047897	protein_coding	Ripply2	ENSMUST00000058846	protein_coding	principal1	9	1	87015537	503
ENSMUSG00000047897	protein_coding	Ripply2	ENSMUST00000188187	retained_intron		9	1	87015636	640
ENSMUSG00000054836	protein_coding	Elp6	ENSMUST00000199592	protein_coding	principal1	9	1	110305173	1304
ENSMUSG00000006575	protein_coding	Rundc3a	ENSMUST00000107105	protein_coding		11	1	102393403	1861
ENSMUSG00000054836	protein_coding	Elp6	ENSMUST00000068071	protein_coding		9	1	110305204	2219
ENSMUSG00000054836	protein_coding	Elp6	ENSMUST00000198247	nonsense_mediated_decay		9	1	110305240	538
ENSMUSG00000054836	protein_coding	Elp6	ENSMUST00000199114	protein_coding		9	1	110305496	567
ENSMUSG00000054836	protein_coding	Elp6	ENSMUST00000196855	retained_intron		9	1	110309647	717
ENSMUSG00000033361	protein_coding	Prrg3	ENSMUST00000126362	protein_coding		X	1	71962624	344
ENSMUSG00000106123	TEC	Gm42638	ENSMUST00000196065	TEC		9	-1	110330564	2587
ENSMUSG00000033361	protein_coding	Prrg3	ENSMUST00000048790	protein_coding	principal1	X	1	71962982	5931
ENSMUSG00000006575	protein_coding	Rundc3a	ENSMUST00000107102	protein_coding	alternative1	11	1	102393403	1837
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000160147	protein_coding	principal2	9	1	57130690	3820
ENSMUSG00000006575	protein_coding	Rundc3a	ENSMUST00000107103	protein_coding	alternative1	11	1	102393403	1822
ENSMUSG00000033361	protein_coding	Prrg3	ENSMUST00000170096	protein_coding	principal1	X	1	71962625	3408
ENSMUSG00000112881	TEC	Gm49344	ENSMUST00000220056	TEC		10	1	116566782	1250
ENSMUSG00000006575	protein_coding	Rundc3a	ENSMUST00000006750	protein_coding	principal2	11	1	102393403	2046
ENSMUSG00000053080	protein_coding	2700081O15Rik	ENSMUST00000159348	protein_coding	principal1	19	1	7417625	4989
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000162915	nonsense_mediated_decay		9	1	57130768	889
ENSMUSG00000053080	protein_coding	2700081O15Rik	ENSMUST00000189779	retained_intron		19	1	7418717	2372
ENSMUSG00000053080	protein_coding	2700081O15Rik	ENSMUST00000161907	protein_coding		19	1	7420090	1168
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000161663	protein_coding		9	1	57130768	2620
ENSMUSG00000053080	protein_coding	2700081O15Rik	ENSMUST00000191580	nonsense_mediated_decay		19	1	7420409	355
ENSMUSG00000053080	protein_coding	2700081O15Rik	ENSMUST00000159346	protein_coding		19	1	7420419	821
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000161696	retained_intron		9	1	57130770	1977
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000034836	protein_coding	alternative2	9	1	57130770	3215
ENSMUSG00000081499	processed_pseudogene	Gm12517	ENSMUST00000122082	processed_pseudogene		3	-1	108602815	425
ENSMUSG00000053080	protein_coding	2700081O15Rik	ENSMUST00000160561	retained_intron		19	1	7421028	4064
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000160122	processed_transcript		9	1	57130777	342
ENSMUSG00000006575	protein_coding	Rundc3a	ENSMUST00000146330	retained_intron		11	1	102397864	1878
ENSMUSG00000006575	protein_coding	Rundc3a	ENSMUST00000128331	processed_transcript		11	1	102398119	635
ENSMUSG00000006575	protein_coding	Rundc3a	ENSMUST00000150982	processed_transcript		11	1	102399167	1017
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000160584	nonsense_mediated_decay		9	1	57130786	1087
ENSMUSG00000006575	protein_coding	Rundc3a	ENSMUST00000142157	processed_transcript		11	1	102399564	866
ENSMUSG00000006575	protein_coding	Rundc3a	ENSMUST00000131219	processed_transcript		11	1	102399756	462
ENSMUSG00000006575	protein_coding	Rundc3a	ENSMUST00000132876	processed_transcript		11	1	102399858	313
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000159130	nonsense_mediated_decay		9	1	57130786	1518
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000161182	protein_coding		9	1	57130786	2909
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000162340	retained_intron		9	1	57131374	369
ENSMUSG00000040389	protein_coding	Wdr47	ENSMUST00000051145	protein_coding	principal1	3	1	108591279	4222
ENSMUSG00000039735	protein_coding	Fnbp1l	ENSMUST00000197259	protein_coding		3	-1	122563881	3553
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000159954	retained_intron		9	1	57134943	888
ENSMUSG00000040389	protein_coding	Wdr47	ENSMUST00000124731	nonsense_mediated_decay		3	1	108591352	745
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000161338	nonsense_mediated_decay		9	1	57135592	649
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000160042	retained_intron		9	1	57136745	563
ENSMUSG00000040389	protein_coding	Wdr47	ENSMUST00000139626	retained_intron		3	1	108591389	1088
ENSMUSG00000040389	protein_coding	Wdr47	ENSMUST00000123568	processed_transcript		3	1	108618853	663
ENSMUSG00000040389	protein_coding	Wdr47	ENSMUST00000133453	retained_intron		3	1	108619234	529
ENSMUSG00000040389	protein_coding	Wdr47	ENSMUST00000197398	processed_transcript		3	1	108623349	654
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000160426	nonsense_mediated_decay		9	1	57138043	861
ENSMUSG00000032872	protein_coding	Cyb5r4	ENSMUST00000168529	protein_coding	principal1	9	1	87022014	2644
ENSMUSG00000040389	protein_coding	Wdr47	ENSMUST00000144325	retained_intron		3	1	108627194	701
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000159101	nonsense_mediated_decay		9	1	57138426	692
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000159402	retained_intron		9	1	57138868	566
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000159843	retained_intron		9	1	57139500	805
ENSMUSG00000032485	protein_coding	Scap	ENSMUST00000198976	protein_coding		9	1	110333288	619
ENSMUSG00000032485	protein_coding	Scap	ENSMUST00000198871	retained_intron		9	1	110333296	425
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000109494	protein_coding		13	1	93303757	2468
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000109493	protein_coding		13	1	93304102	2580
ENSMUSG00000029617	protein_coding	Ccz1	ENSMUST00000031621	protein_coding	principal1	5	-1	144014853	1769
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000159711	retained_intron		9	1	57139500	1378
ENSMUSG00000053593	protein_coding	Fate1	ENSMUST00000066116	protein_coding	principal1	X	1	71972986	938
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000159496	retained_intron		9	1	57139877	807
ENSMUSG00000029617	protein_coding	Ccz1	ENSMUST00000200619	processed_transcript		5	-1	143992584	362
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000162634	retained_intron		9	1	57140278	1067
ENSMUSG00000029617	protein_coding	Ccz1	ENSMUST00000200669	retained_intron		5	-1	144004159	825
ENSMUSG00000053593	protein_coding	Fate1	ENSMUST00000114569	protein_coding	principal1	X	1	71981522	1053
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000160280	retained_intron		9	1	57140683	857
ENSMUSG00000032295	protein_coding	Man2c1	ENSMUST00000161875	retained_intron		9	1	57141378	658
ENSMUSG00000029617	protein_coding	Ccz1	ENSMUST00000197555	retained_intron		5	-1	144014877	935
ENSMUSG00000053593	protein_coding	Fate1	ENSMUST00000137031	processed_transcript		X	1	71983205	819
ENSMUSG00000029617	protein_coding	Ccz1	ENSMUST00000199922	retained_intron		5	-1	144014877	2286
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000102752	protein_coding		13	1	93304495	5713
ENSMUSG00000032872	protein_coding	Cyb5r4	ENSMUST00000174724	processed_transcript		9	1	87022087	2733
ENSMUSG00000032872	protein_coding	Cyb5r4	ENSMUST00000174043	retained_intron		9	1	87027071	3832
ENSMUSG00000032872	protein_coding	Cyb5r4	ENSMUST00000174540	retained_intron		9	1	87029571	730
ENSMUSG00000032872	protein_coding	Cyb5r4	ENSMUST00000174294	nonsense_mediated_decay		9	1	87058939	905
ENSMUSG00000030451	protein_coding	Herc2	ENSMUST00000076226	protein_coding	principal2	7	1	56050253	15250
ENSMUSG00000099539	processed_pseudogene	Gm8282	ENSMUST00000187559	processed_pseudogene		9	1	87127334	483
ENSMUSG00000051225	protein_coding	Fam83a	ENSMUST00000160942	protein_coding	principal1	15	1	57985419	2876
ENSMUSG00000032485	protein_coding	Scap	ENSMUST00000098350	protein_coding	principal1	9	1	110333356	4227
ENSMUSG00000030451	protein_coding	Herc2	ENSMUST00000164095	protein_coding	principal2	7	1	56050389	15261
ENSMUSG00000032485	protein_coding	Scap	ENSMUST00000198761	protein_coding		9	1	110333550	432
ENSMUSG00000051225	protein_coding	Fam83a	ENSMUST00000050374	protein_coding		15	1	57985910	1189
ENSMUSG00000032485	protein_coding	Scap	ENSMUST00000197630	protein_coding		9	1	110333636	597
ENSMUSG00000030451	protein_coding	Herc2	ENSMUST00000206537	protein_coding		7	1	56050765	3009
ENSMUSG00000051225	protein_coding	Fam83a	ENSMUST00000161231	processed_transcript		15	1	58002146	529
ENSMUSG00000032485	protein_coding	Scap	ENSMUST00000199709	protein_coding		9	1	110344199	362
ENSMUSG00000030451	protein_coding	Herc2	ENSMUST00000205303	protein_coding	alternative2	7	1	56050877	14403
ENSMUSG00000032485	protein_coding	Scap	ENSMUST00000196465	retained_intron		9	1	110361184	2501
ENSMUSG00000042557	protein_coding	Sin3a	ENSMUST00000169879	protein_coding		9	1	57072040	364
ENSMUSG00000032485	protein_coding	Scap	ENSMUST00000199886	processed_transcript		9	1	110361617	353
ENSMUSG00000032485	protein_coding	Scap	ENSMUST00000196775	retained_intron		9	1	110374310	460
ENSMUSG00000022203	protein_coding	Efs	ENSMUST00000022813	protein_coding	principal1	14	-1	54925914	2705
ENSMUSG00000030451	protein_coding	Herc2	ENSMUST00000206990	retained_intron		7	1	56067984	803
ENSMUSG00000039735	protein_coding	Fnbp1l	ENSMUST00000239148	protein_coding		3	-1	122619715	5357
ENSMUSG00000032485	protein_coding	Scap	ENSMUST00000196424	retained_intron		9	1	110378293	358
ENSMUSG00000030451	protein_coding	Herc2	ENSMUST00000206101	processed_transcript		7	1	56157730	589
ENSMUSG00000022203	protein_coding	Efs	ENSMUST00000227037	protein_coding		14	-1	54926126	2540
ENSMUSG00000039735	protein_coding	Fnbp1l	ENSMUST00000162409	protein_coding	principal3	3	-1	122619715	5198
ENSMUSG00000030451	protein_coding	Herc2	ENSMUST00000205678	protein_coding		7	1	56220500	501
ENSMUSG00000091102	TEC	5830462I19Rik	ENSMUST00000168137	TEC		9	-1	110375430	3383
ENSMUSG00000022203	protein_coding	Efs	ENSMUST00000227587	nonsense_mediated_decay		14	-1	54925655	961
ENSMUSG00000039735	protein_coding	Fnbp1l	ENSMUST00000162947	protein_coding	alternative1	3	-1	122619715	5372
ENSMUSG00000039735	protein_coding	Fnbp1l	ENSMUST00000197342	retained_intron		3	-1	122555112	7045
ENSMUSG00000039735	protein_coding	Fnbp1l	ENSMUST00000162884	retained_intron		3	-1	122559244	423
ENSMUSG00000113136	lincRNA	Gm19951	ENSMUST00000222616	lincRNA		12	1	99643093	1328
ENSMUSG00000028173	protein_coding	Wls	ENSMUST00000068952	protein_coding	principal1	3	1	159839672	3559
ENSMUSG00000106194	antisense	Gm43569	ENSMUST00000196200	antisense		3	1	122565050	559
ENSMUSG00000106364	TEC	Gm42994	ENSMUST00000195964	TEC		3	-1	122577072	2549
ENSMUSG00000028173	protein_coding	Wls	ENSMUST00000198878	protein_coding	principal1	3	1	159839737	2050
ENSMUSG00000092073	protein_coding	Gm6205	ENSMUST00000190001	protein_coding	principal1	5	1	94648382	2515
ENSMUSG00000042761	protein_coding	Mrap2	ENSMUST00000113149	protein_coding	principal1	9	1	87144306	2112
ENSMUSG00000092073	protein_coding	Gm6205	ENSMUST00000165424	protein_coding	principal1	5	1	94682645	1080
ENSMUSG00000042761	protein_coding	Mrap2	ENSMUST00000049457	protein_coding	principal1	9	1	87144306	1931
ENSMUSG00000042761	protein_coding	Mrap2	ENSMUST00000179313	protein_coding	principal1	9	1	87144343	2039
ENSMUSG00000005864	protein_coding	Cnga2	ENSMUST00000006020	protein_coding	principal1	X	1	71991849	3064
ENSMUSG00000028173	protein_coding	Wls	ENSMUST00000200571	retained_intron		3	1	159839739	2338
ENSMUSG00000102830	TEC	Gm37012	ENSMUST00000194991	TEC		9	-1	87189413	1078
ENSMUSG00000005864	protein_coding	Cnga2	ENSMUST00000145642	processed_transcript		X	1	71991855	368
ENSMUSG00000028173	protein_coding	Wls	ENSMUST00000197328	retained_intron		3	1	159839739	2949
ENSMUSG00000028173	protein_coding	Wls	ENSMUST00000200191	nonsense_mediated_decay		3	1	159839739	2453
ENSMUSG00000067818	protein_coding	Myl9	ENSMUST00000088552	protein_coding	principal1	2	1	156775420	1128
ENSMUSG00000028173	protein_coding	Wls	ENSMUST00000196276	retained_intron		3	1	159839910	634
ENSMUSG00000028173	protein_coding	Wls	ENSMUST00000196782	retained_intron		3	1	159848451	2824
ENSMUSG00000033343	protein_coding	Magea4	ENSMUST00000048675	protein_coding	principal1	X	1	72222017	948
ENSMUSG00000067818	protein_coding	Myl9	ENSMUST00000145299	processed_transcript		2	1	156775454	619
ENSMUSG00000105990	TEC	Gm43307	ENSMUST00000199465	TEC		3	1	159875846	2371
ENSMUSG00000028001	protein_coding	Fga	ENSMUST00000029630	protein_coding		3	1	83026076	2083
ENSMUSG00000067818	protein_coding	Myl9	ENSMUST00000132985	processed_transcript		2	1	156775457	345
ENSMUSG00000067818	protein_coding	Myl9	ENSMUST00000131622	processed_transcript		2	1	156778517	387
ENSMUSG00000028001	protein_coding	Fga	ENSMUST00000166581	protein_coding	principal1	3	1	83026215	2587
ENSMUSG00000040770	protein_coding	Il25	ENSMUST00000037863	protein_coding	principal1	14	1	54932695	1064
ENSMUSG00000082196	processed_pseudogene	Gm14231	ENSMUST00000120090	processed_pseudogene		2	-1	156790403	592
ENSMUSG00000114356	unprocessed_pseudogene	Gm47265	ENSMUST00000223746	unprocessed_pseudogene		X	1	72229990	1123
ENSMUSG00000029618	protein_coding	Ocm	ENSMUST00000031622	protein_coding	principal1	5	-1	144026599	658
ENSMUSG00000029618	protein_coding	Ocm	ENSMUST00000110702	protein_coding		5	-1	144026670	313
ENSMUSG00000036057	protein_coding	Ptpn23	ENSMUST00000040021	protein_coding	principal1	9	-1	110408213	5346
ENSMUSG00000094004	protein_coding	Gm5128	ENSMUST00000113173	protein_coding	principal1	X	1	135373284	3677
ENSMUSG00000029618	protein_coding	Ocm	ENSMUST00000085704	protein_coding	principal1	5	-1	144025706	330
ENSMUSG00000036057	protein_coding	Ptpn23	ENSMUST00000200531	protein_coding		9	-1	110386247	746
ENSMUSG00000036057	protein_coding	Ptpn23	ENSMUST00000200278	retained_intron		9	-1	110386649	632
ENSMUSG00000036057	protein_coding	Ptpn23	ENSMUST00000199254	retained_intron		9	-1	110390475	692
ENSMUSG00000094004	protein_coding	Gm5128	ENSMUST00000180198	protein_coding	principal1	X	1	135373284	3836
ENSMUSG00000032484	protein_coding	Ngp	ENSMUST00000035061	protein_coding	principal1	9	1	110419747	1222
ENSMUSG00000033831	protein_coding	Fgb	ENSMUST00000048246	protein_coding	principal1	3	-1	83049863	3810
ENSMUSG00000030268	protein_coding	Bcat1	ENSMUST00000032402	protein_coding		6	-1	145048812	7833
ENSMUSG00000030268	protein_coding	Bcat1	ENSMUST00000111742	protein_coding	principal1	6	-1	145076184	2556
ENSMUSG00000030268	protein_coding	Bcat1	ENSMUST00000048252	protein_coding		6	-1	145076184	1642
ENSMUSG00000030268	protein_coding	Bcat1	ENSMUST00000145911	processed_transcript		6	-1	145035197	848
ENSMUSG00000030268	protein_coding	Bcat1	ENSMUST00000204138	protein_coding		6	-1	145048610	540
ENSMUSG00000030268	protein_coding	Bcat1	ENSMUST00000136819	protein_coding		6	-1	145032843	402
ENSMUSG00000108297	sense_intronic	Gm44167	ENSMUST00000204957	sense_intronic		6	-1	113799684	1878
ENSMUSG00000030268	protein_coding	Bcat1	ENSMUST00000123930	protein_coding		6	-1	145047853	1082
ENSMUSG00000002033	protein_coding	Cd3g	ENSMUST00000002101	protein_coding	principal1	9	-1	44980431	1023
ENSMUSG00000087053	antisense	Gm15082	ENSMUST00000147045	antisense		6	1	113937739	1960
ENSMUSG00000002033	protein_coding	Cd3g	ENSMUST00000159019	retained_intron		9	-1	44973063	2539
ENSMUSG00000002033	protein_coding	Cd3g	ENSMUST00000160886	protein_coding		9	-1	44980431	412
ENSMUSG00000030268	protein_coding	Bcat1	ENSMUST00000155693	processed_transcript		6	-1	145040755	484
ENSMUSG00000030268	protein_coding	Bcat1	ENSMUST00000149769	protein_coding		6	-1	145047661	628
ENSMUSG00000030268	protein_coding	Bcat1	ENSMUST00000154611	processed_transcript		6	-1	145040867	656
ENSMUSG00000054672	protein_coding	5830411N06Rik	ENSMUST00000210212	retained_intron		7	1	140247284	4372
ENSMUSG00000086643	antisense	Gm15687	ENSMUST00000141440	antisense		6	1	145056389	269
ENSMUSG00000097150	antisense	Gm26513	ENSMUST00000181802	antisense		15	1	98093283	2489
ENSMUSG00000097419	antisense	Gm26666	ENSMUST00000180763	antisense		6	1	145047559	2461
ENSMUSG00000112222	processed_pseudogene	Tyms-ps	ENSMUST00000219550	processed_pseudogene		10	1	87966847	915
ENSMUSG00000027490	protein_coding	E2f1	ENSMUST00000103145	protein_coding	principal3	2	-1	154569892	2732
ENSMUSG00000087179	lincRNA	Gm14230	ENSMUST00000137463	lincRNA		2	-1	156839820	874
ENSMUSG00000087179	lincRNA	Gm14230	ENSMUST00000149275	lincRNA		2	-1	156839892	388
ENSMUSG00000054672	protein_coding	5830411N06Rik	ENSMUST00000059882	retained_intron		7	1	140247301	2897
ENSMUSG00000087179	lincRNA	Gm14230	ENSMUST00000134838	lincRNA		2	-1	156839800	450
ENSMUSG00000027490	protein_coding	E2f1	ENSMUST00000000894	protein_coding	alternative2	2	-1	154569720	2755
ENSMUSG00000082980	protein_coding	Olfr1274	ENSMUST00000216111	protein_coding	principal1	2	1	90398683	3395
ENSMUSG00000082980	protein_coding	Olfr1274	ENSMUST00000120681	protein_coding	principal1	2	1	90400640	1035
ENSMUSG00000112183	lincRNA	Gm48306	ENSMUST00000219418	lincRNA		10	1	87980462	950
ENSMUSG00000090865	processed_pseudogene	Gm17074	ENSMUST00000167284	processed_pseudogene		14	-1	4529307	556
ENSMUSG00000112235	TEC	Gm48307	ENSMUST00000218037	TEC		10	1	88038225	1455
ENSMUSG00000031340	protein_coding	Gabre	ENSMUST00000064780	protein_coding	principal1	X	-1	72274803	4306
ENSMUSG00000031340	protein_coding	Gabre	ENSMUST00000153740	retained_intron		X	-1	72274803	1938
ENSMUSG00000054792	protein_coding	Klhl18	ENSMUST00000068025	protein_coding	principal2	9	-1	110476694	4530
ENSMUSG00000031340	protein_coding	Gabre	ENSMUST00000148499	processed_transcript		X	-1	72269763	579
ENSMUSG00000054792	protein_coding	Klhl18	ENSMUST00000198400	protein_coding		9	-1	110462480	4638
ENSMUSG00000054792	protein_coding	Klhl18	ENSMUST00000197336	nonsense_mediated_decay		9	-1	110476590	4225
ENSMUSG00000054792	protein_coding	Klhl18	ENSMUST00000198164	protein_coding	alternative1	9	-1	110476689	4538
ENSMUSG00000054792	protein_coding	Klhl18	ENSMUST00000199700	retained_intron		9	-1	110432545	1863
ENSMUSG00000054792	protein_coding	Klhl18	ENSMUST00000200256	protein_coding		9	-1	110455401	648
ENSMUSG00000054792	protein_coding	Klhl18	ENSMUST00000198327	retained_intron		9	-1	110447251	861
ENSMUSG00000033075	protein_coding	Senp1	ENSMUST00000044189	protein_coding	principal2	15	-1	98093744	6575
ENSMUSG00000011486	protein_coding	Slc25a41	ENSMUST00000058661	protein_coding	principal3	17	-1	57041654	1225
ENSMUSG00000033075	protein_coding	Senp1	ENSMUST00000181855	retained_intron		15	-1	98064237	4886
ENSMUSG00000040759	protein_coding	Cmtm5	ENSMUST00000037814	protein_coding	principal1	14	1	54936261	1095
ENSMUSG00000011486	protein_coding	Slc25a41	ENSMUST00000169012	protein_coding	alternative2	17	-1	57041647	1172
ENSMUSG00000033075	protein_coding	Senp1	ENSMUST00000180716	nonsense_mediated_decay		15	-1	98093569	3882
ENSMUSG00000040759	protein_coding	Cmtm5	ENSMUST00000227441	protein_coding		14	1	54936497	610
ENSMUSG00000106365	lincRNA	Gm43568	ENSMUST00000199116	lincRNA		3	-1	122630168	1270
ENSMUSG00000033075	protein_coding	Senp1	ENSMUST00000180657	protein_coding	alternative2	15	-1	98093251	3806
ENSMUSG00000040759	protein_coding	Cmtm5	ENSMUST00000226807	retained_intron		14	1	54937781	687
ENSMUSG00000106365	lincRNA	Gm43568	ENSMUST00000198040	lincRNA		3	-1	122629663	396
ENSMUSG00000106365	lincRNA	Gm43568	ENSMUST00000198427	lincRNA		3	-1	122629885	476
ENSMUSG00000033075	protein_coding	Senp1	ENSMUST00000180461	processed_transcript		15	-1	98048975	568
ENSMUSG00000033075	protein_coding	Senp1	ENSMUST00000181349	retained_intron		15	-1	98093370	2830
ENSMUSG00000033075	protein_coding	Senp1	ENSMUST00000183105	protein_coding		15	-1	98087544	518
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000164088	protein_coding		10	-1	116549163	2618
ENSMUSG00000033075	protein_coding	Senp1	ENSMUST00000180531	processed_transcript		15	-1	98093305	1270
ENSMUSG00000033075	protein_coding	Senp1	ENSMUST00000182611	processed_transcript		15	-1	98092887	853
ENSMUSG00000039801	protein_coding	Cplane1	ENSMUST00000110617	protein_coding	principal1	15	1	8169106	10469
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000080127	protein_coding		13	1	93304799	3052
ENSMUSG00000039801	protein_coding	Cplane1	ENSMUST00000150869	retained_intron		15	1	8186211	683
ENSMUSG00000039801	protein_coding	Cplane1	ENSMUST00000130748	retained_intron		15	1	8194301	989
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000109497	protein_coding		13	1	93305103	779
ENSMUSG00000033065	protein_coding	Pfkm	ENSMUST00000229280	protein_coding		15	1	98092589	438
ENSMUSG00000039801	protein_coding	Cplane1	ENSMUST00000154291	retained_intron		15	1	8215969	840
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000109498	protein_coding		13	1	93305103	815
ENSMUSG00000039801	protein_coding	Cplane1	ENSMUST00000228039	protein_coding		15	1	8223143	93
ENSMUSG00000039801	protein_coding	Cplane1	ENSMUST00000128772	retained_intron		15	1	8247103	2153
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000060490	protein_coding	principal1	13	1	93305159	2765
ENSMUSG00000112932	TEC	Gm48308	ENSMUST00000220444	TEC		10	1	88088198	1627
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000109492	protein_coding		13	1	93305184	1533
ENSMUSG00000024758	protein_coding	Rtn3	ENSMUST00000088169	protein_coding	principal3	19	-1	7483202	2762
ENSMUSG00000054672	protein_coding	5830411N06Rik	ENSMUST00000164583	protein_coding	principal4	7	1	140247378	3342
ENSMUSG00000091894	unprocessed_pseudogene	Gm3030	ENSMUST00000163410	unprocessed_pseudogene		14	1	4536038	516
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000109496	protein_coding		13	1	93305278	772
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000109495	protein_coding		13	1	93305278	813
ENSMUSG00000054672	protein_coding	5830411N06Rik	ENSMUST00000093984	protein_coding	alternative2	7	1	140247381	2991
ENSMUSG00000054672	protein_coding	5830411N06Rik	ENSMUST00000211749	retained_intron		7	1	140297684	1286
ENSMUSG00000007617	protein_coding	Homer1	ENSMUST00000079086	protein_coding		13	1	93308034	4287
ENSMUSG00000042557	protein_coding	Sin3a	ENSMUST00000167715	protein_coding	principal3	9	1	57075338	4961
ENSMUSG00000066268	protein_coding	Olfr586	ENSMUST00000213281	protein_coding	principal1	7	-1	103125638	5001
ENSMUSG00000024758	protein_coding	Rtn3	ENSMUST00000088171	protein_coding		19	-1	7483272	4956
ENSMUSG00000115234	antisense	Gm49130	ENSMUST00000227485	antisense		14	1	54940355	706
ENSMUSG00000105150	processed_pseudogene	Gm43615	ENSMUST00000197465	processed_pseudogene		5	-1	144069190	1773
ENSMUSG00000114169	TEC	Gm47075	ENSMUST00000222224	TEC		13	1	93312041	2015
ENSMUSG00000042557	protein_coding	Sin3a	ENSMUST00000168678	protein_coding	principal3	9	1	57076376	5206
ENSMUSG00000066268	protein_coding	Olfr586	ENSMUST00000215304	protein_coding	principal1	7	-1	103125624	6169
ENSMUSG00000066268	protein_coding	Olfr586	ENSMUST00000211075	protein_coding	principal1	7	-1	103125614	4562
ENSMUSG00000066268	protein_coding	Olfr586	ENSMUST00000084811	protein_coding		7	-1	103122782	954
ENSMUSG00000024758	protein_coding	Rtn3	ENSMUST00000065304	protein_coding		19	-1	7483272	5013
ENSMUSG00000042557	protein_coding	Sin3a	ENSMUST00000168177	protein_coding	alternative1	9	1	57076399	5086
ENSMUSG00000024758	protein_coding	Rtn3	ENSMUST00000025667	protein_coding	alternative2	19	-1	7483281	2898
ENSMUSG00000042557	protein_coding	Sin3a	ENSMUST00000163400	protein_coding		9	1	57076628	544
ENSMUSG00000024758	protein_coding	Rtn3	ENSMUST00000235593	protein_coding		19	-1	7483267	2403
ENSMUSG00000042557	protein_coding	Sin3a	ENSMUST00000168502	protein_coding	alternative1	9	1	57081158	4899
ENSMUSG00000032489	protein_coding	Kif9	ENSMUST00000198858	protein_coding		9	1	110476958	453
ENSMUSG00000098039	processed_pseudogene	Gm26925	ENSMUST00000182470	processed_pseudogene		5	-1	144111772	957
ENSMUSG00000112610	lincRNA	Gm30165	ENSMUST00000218769	lincRNA		10	-1	27698327	1961
ENSMUSG00000042557	protein_coding	Sin3a	ENSMUST00000165927	retained_intron		9	1	57095248	641
ENSMUSG00000042557	protein_coding	Sin3a	ENSMUST00000167963	retained_intron		9	1	57113461	640
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000169576	nonsense_mediated_decay		10	-1	116581496	2955
ENSMUSG00000042557	protein_coding	Sin3a	ENSMUST00000049169	protein_coding	principal3	9	1	57086581	4845
ENSMUSG00000112786	processed_pseudogene	Gm47696	ENSMUST00000217988	processed_pseudogene		10	-1	27784643	400
ENSMUSG00000033065	protein_coding	Pfkm	ENSMUST00000230445	protein_coding	principal1	15	1	98092644	2798
ENSMUSG00000112206	lincRNA	Gm30228	ENSMUST00000218501	lincRNA		10	-1	27809624	1949
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113707	protein_coding	principal3	9	-1	67049406	1898
ENSMUSG00000033065	protein_coding	Pfkm	ENSMUST00000229344	protein_coding		15	1	98094870	785
ENSMUSG00000115888	lincRNA	Gm31369	ENSMUST00000230208	lincRNA		15	-1	80438603	732
ENSMUSG00000112703	processed_pseudogene	Gm18041	ENSMUST00000218210	processed_pseudogene		10	1	27778274	618
ENSMUSG00000117297	sense_intronic	Gm49888	ENSMUST00000232713	sense_intronic		17	-1	57069360	219
ENSMUSG00000115888	lincRNA	Gm31369	ENSMUST00000231002	lincRNA		15	-1	80438593	775
ENSMUSG00000033065	protein_coding	Pfkm	ENSMUST00000051226	protein_coding	principal1	15	1	98108466	2879
ENSMUSG00000091390	antisense	Gm17168	ENSMUST00000169146	antisense		17	1	57041775	345
ENSMUSG00000033065	protein_coding	Pfkm	ENSMUST00000163507	protein_coding	principal1	15	1	98092589	2816
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113695	protein_coding		9	-1	67043802	1607
ENSMUSG00000105482	antisense	Gm42596	ENSMUST00000196305	antisense		5	1	110447989	1958
ENSMUSG00000038970	protein_coding	Lmtk2	ENSMUST00000041804	protein_coding	principal1	5	1	144100436	8114
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113690	protein_coding		9	-1	67043962	2890
ENSMUSG00000109875	processed_pseudogene	Gm45456	ENSMUST00000210841	processed_pseudogene		7	1	140315813	243
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000034928	protein_coding		9	-1	67049209	1824
ENSMUSG00000002668	protein_coding	Dennd1c	ENSMUST00000233564	nonsense_mediated_decay		17	-1	57078439	2984
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000129733	nonsense_mediated_decay		9	-1	67049186	1544
ENSMUSG00000050439	protein_coding	Enthd1	ENSMUST00000229110	protein_coding	principal1	15	-1	80565156	2236
ENSMUSG00000061489	protein_coding	Olfr525	ENSMUST00000215542	processed_transcript		7	1	140320858	4683
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113701	protein_coding	alternative1	9	-1	67049201	1677
ENSMUSG00000061489	protein_coding	Olfr525	ENSMUST00000214594	protein_coding	principal1	7	1	140320858	5137
ENSMUSG00000050439	protein_coding	Enthd1	ENSMUST00000096347	protein_coding	principal1	15	-1	80560470	2110
ENSMUSG00000061489	protein_coding	Olfr525	ENSMUST00000078103	protein_coding	principal1	7	1	140322602	1050
ENSMUSG00000116345	processed_pseudogene	Gm19141	ENSMUST00000230279	processed_pseudogene		15	1	80475892	2047
ENSMUSG00000062782	protein_coding	Olfr527	ENSMUST00000214858	protein_coding	principal1	7	1	140334017	3362
ENSMUSG00000062782	protein_coding	Olfr527	ENSMUST00000214143	protein_coding	principal1	7	1	140335358	3094
ENSMUSG00000062782	protein_coding	Olfr527	ENSMUST00000172230	protein_coding	principal1	7	1	140335843	978
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000105267	protein_coding	principal1	10	-1	116581500	2800
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113697	protein_coding	alternative1	9	-1	67049275	1742
ENSMUSG00000110059	unprocessed_pseudogene	Olfr528-ps1	ENSMUST00000211655	unprocessed_pseudogene		7	1	140341477	728
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000139046	nonsense_mediated_decay		9	-1	67043778	1419
ENSMUSG00000002668	protein_coding	Dennd1c	ENSMUST00000011623	protein_coding	principal1	17	-1	57078510	2521
ENSMUSG00000002668	protein_coding	Dennd1c	ENSMUST00000233234	retained_intron		17	-1	57067892	460
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000105265	protein_coding		10	-1	116581501	2268
ENSMUSG00000002668	protein_coding	Dennd1c	ENSMUST00000233674	processed_transcript		17	-1	57071797	814
ENSMUSG00000002668	protein_coding	Dennd1c	ENSMUST00000233650	processed_transcript		17	-1	57074150	457
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113693	protein_coding		9	-1	67049172	1054
ENSMUSG00000002668	protein_coding	Dennd1c	ENSMUST00000232685	retained_intron		17	-1	57078514	2390
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113689	protein_coding		9	-1	67043709	904
ENSMUSG00000002668	protein_coding	Dennd1c	ENSMUST00000232938	processed_transcript		17	-1	57078453	368
ENSMUSG00000043323	protein_coding	Fbrsl1	ENSMUST00000198768	protein_coding	alternative2	5	-1	110448602	3934
ENSMUSG00000056919	protein_coding	Cep162	ENSMUST00000093802	protein_coding	principal1	9	-1	87255536	7685
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000169921	protein_coding	principal1	10	-1	116581511	2120
ENSMUSG00000043323	protein_coding	Fbrsl1	ENSMUST00000056124	protein_coding		5	-1	110387096	2700
ENSMUSG00000056919	protein_coding	Cep162	ENSMUST00000139301	processed_transcript		9	-1	87209910	515
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000167706	protein_coding		10	-1	116581502	1621
ENSMUSG00000056919	protein_coding	Cep162	ENSMUST00000188289	retained_intron		9	-1	87227958	2996
ENSMUSG00000104946	processed_pseudogene	Gm19104	ENSMUST00000198392	processed_pseudogene		3	1	146803163	679
ENSMUSG00000030302	protein_coding	Atp2b2	ENSMUST00000101045	protein_coding	principal3	6	-1	114042026	8877
ENSMUSG00000043323	protein_coding	Fbrsl1	ENSMUST00000196801	nonsense_mediated_decay		5	-1	110448486	4469
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000219544	retained_intron		10	-1	116499478	611
ENSMUSG00000056919	protein_coding	Cep162	ENSMUST00000144137	retained_intron		9	-1	87255288	3131
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000169937	processed_transcript		10	-1	116581483	891
ENSMUSG00000043323	protein_coding	Fbrsl1	ENSMUST00000198834	protein_coding	alternative2	5	-1	110386962	2571
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000171214	processed_transcript		10	-1	116581493	623
ENSMUSG00000099385	processed_pseudogene	Gm9540	ENSMUST00000188230	processed_pseudogene		9	1	87394250	478
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000164383	processed_transcript		10	-1	116581490	823
ENSMUSG00000043323	protein_coding	Fbrsl1	ENSMUST00000198415	protein_coding		5	-1	110433321	2692
ENSMUSG00000102683	TEC	Gm37375	ENSMUST00000193859	TEC		9	1	87498112	387
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000166166	processed_transcript		10	-1	116581485	442
ENSMUSG00000030302	protein_coding	Atp2b2	ENSMUST00000089003	protein_coding	principal3	6	-1	113891539	7067
ENSMUSG00000040752	protein_coding	Myh6	ENSMUST00000081857	protein_coding	principal1	14	-1	54966641	6113
ENSMUSG00000030302	protein_coding	Atp2b2	ENSMUST00000152831	nonsense_mediated_decay		6	-1	114042015	7326
ENSMUSG00000101892	protein_coding	9130401M01Rik	ENSMUST00000100655	protein_coding	principal1	15	-1	58034315	1341
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000169507	nonsense_mediated_decay		10	-1	116581465	810
ENSMUSG00000030302	protein_coding	Atp2b2	ENSMUST00000205052	protein_coding	alternative1	6	-1	113891539	5658
ENSMUSG00000043323	protein_coding	Fbrsl1	ENSMUST00000200293	protein_coding		5	-1	110448503	976
ENSMUSG00000040752	protein_coding	Myh6	ENSMUST00000226297	protein_coding	principal1	14	-1	54966605	6008
ENSMUSG00000046329	protein_coding	Slc25a23	ENSMUST00000040280	protein_coding	principal1	17	-1	57059863	3362
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000218490	nonsense_mediated_decay		10	-1	116580538	777
ENSMUSG00000043323	protein_coding	Fbrsl1	ENSMUST00000069483	protein_coding	principal2	5	-1	110448503	4720
ENSMUSG00000046329	protein_coding	Slc25a23	ENSMUST00000163442	protein_coding		17	-1	57052824	736
ENSMUSG00000030302	protein_coding	Atp2b2	ENSMUST00000101044	protein_coding	alternative1	6	-1	113934681	4586
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000171944	processed_transcript		10	-1	116581491	341
ENSMUSG00000101892	protein_coding	9130401M01Rik	ENSMUST00000187062	processed_transcript		15	-1	58027895	1672
ENSMUSG00000046329	protein_coding	Slc25a23	ENSMUST00000170015	protein_coding		17	-1	57053829	796
ENSMUSG00000040752	protein_coding	Myh6	ENSMUST00000228731	protein_coding		14	-1	54944511	542
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000165527	processed_transcript		10	-1	116581496	1044
ENSMUSG00000030302	protein_coding	Atp2b2	ENSMUST00000135199	retained_intron		6	-1	113891370	3463
ENSMUSG00000101892	protein_coding	9130401M01Rik	ENSMUST00000189159	nonsense_mediated_decay		15	-1	58034190	649
ENSMUSG00000030302	protein_coding	Atp2b2	ENSMUST00000144507	processed_transcript		6	-1	113910582	617
ENSMUSG00000046329	protein_coding	Slc25a23	ENSMUST00000171528	protein_coding		17	-1	57053582	598
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000167644	processed_transcript		10	-1	116581483	592
ENSMUSG00000101892	protein_coding	9130401M01Rik	ENSMUST00000185553	protein_coding		15	-1	58034325	387
ENSMUSG00000040752	protein_coding	Myh6	ENSMUST00000227905	retained_intron		14	-1	54944793	718
ENSMUSG00000030302	protein_coding	Atp2b2	ENSMUST00000154738	processed_transcript		6	-1	114042613	659
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000218744	protein_coding		10	-1	116581428	358
ENSMUSG00000103710	TEC	D030062O11Rik	ENSMUST00000192660	TEC		9	1	87729285	2806
ENSMUSG00000040752	protein_coding	Myh6	ENSMUST00000131892	retained_intron		14	-1	54957907	511
ENSMUSG00000046329	protein_coding	Slc25a23	ENSMUST00000171128	nonsense_mediated_decay		17	-1	57055385	818
ENSMUSG00000087083	antisense	Gm15083	ENSMUST00000138670	antisense		6	1	114004789	1413
ENSMUSG00000040752	protein_coding	Myh6	ENSMUST00000124930	protein_coding		14	-1	54966574	411
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000020374	protein_coding		10	-1	116581511	1059
ENSMUSG00000040752	protein_coding	Myh6	ENSMUST00000111456	protein_coding		14	-1	54966927	376
ENSMUSG00000046329	protein_coding	Slc25a23	ENSMUST00000165187	retained_intron		17	-1	57059819	2298
ENSMUSG00000022361	protein_coding	Zhx1	ENSMUST00000175805	protein_coding	principal1	15	-1	58076245	4839
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113685	protein_coding	alternative1	9	-1	67049213	1208
ENSMUSG00000107064	unprocessed_pseudogene	Gm42561	ENSMUST00000202563	unprocessed_pseudogene		5	1	94733356	1442
ENSMUSG00000020166	protein_coding	Cnot2	ENSMUST00000168036	protein_coding		10	-1	116581511	2693
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000212376	protein_coding	alternative2	14	-1	121738861	8107
ENSMUSG00000103716	processed_pseudogene	Gm19430	ENSMUST00000193847	processed_pseudogene		1	1	34928509	2137
ENSMUSG00000052291	processed_transcript	5330438D12Rik	ENSMUST00000219210	lincRNA		10	1	116509052	282
ENSMUSG00000052291	processed_transcript	5330438D12Rik	ENSMUST00000220305	lincRNA		10	1	116509059	374
ENSMUSG00000103548	processed_pseudogene	Gm37670	ENSMUST00000193622	processed_pseudogene		1	-1	34969855	229
ENSMUSG00000052291	processed_transcript	5330438D12Rik	ENSMUST00000218139	bidirectional_promoter_lncRNA		10	1	116581281	2235
ENSMUSG00000052291	processed_transcript	5330438D12Rik	ENSMUST00000219273	lincRNA		10	1	116581576	676
ENSMUSG00000107187	unprocessed_pseudogene	Gm7663	ENSMUST00000201151	unprocessed_pseudogene		5	-1	94772066	1240
ENSMUSG00000052291	processed_transcript	5330438D12Rik	ENSMUST00000064101	pseudogene		10	1	116581281	2229
ENSMUSG00000022361	protein_coding	Zhx1	ENSMUST00000070143	protein_coding	principal1	15	-1	58076469	4764
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000050905	protein_coding	alternative1	9	-1	67049264	1259
ENSMUSG00000022361	protein_coding	Zhx1	ENSMUST00000177276	protein_coding		15	-1	58076214	2398
ENSMUSG00000032419	protein_coding	Tbx18	ENSMUST00000034991	protein_coding	principal1	9	-1	87731260	4679
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113686	protein_coding		9	-1	67043841	998
ENSMUSG00000022361	protein_coding	Zhx1	ENSMUST00000176270	retained_intron		15	-1	58076363	613
ENSMUSG00000032419	protein_coding	Tbx18	ENSMUST00000186698	processed_transcript		9	-1	87730497	423
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113687	protein_coding		9	-1	67049143	962
ENSMUSG00000105359	processed_pseudogene	Rpl21-ps10	ENSMUST00000071237	processed_pseudogene		3	-1	38107922	480
ENSMUSG00000022361	protein_coding	Zhx1	ENSMUST00000176713	retained_intron		15	-1	58076541	1155
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000113684	protein_coding		9	-1	67043733	887
ENSMUSG00000102684	TEC	Gm37374	ENSMUST00000194954	TEC		9	-1	87740020	1829
ENSMUSG00000105219	lincRNA	Gm43821	ENSMUST00000199198	lincRNA		3	-1	38130191	729
ENSMUSG00000022361	protein_coding	Zhx1	ENSMUST00000110168	protein_coding	principal1	15	-1	58076489	5212
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000030185	protein_coding	alternative1	9	-1	67049262	1797
ENSMUSG00000102043	processed_pseudogene	Gm9541	ENSMUST00000188409	processed_pseudogene		9	1	87769770	502
ENSMUSG00000106002	lincRNA	5430434I15Rik	ENSMUST00000197658	lincRNA		3	-1	38208119	1257
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000156899	processed_transcript		9	-1	67032825	1274
ENSMUSG00000099584	processed_pseudogene	Gm28877	ENSMUST00000191349	processed_pseudogene		9	-1	88039692	604
ENSMUSG00000099886	processed_pseudogene	Gm2324	ENSMUST00000187464	processed_pseudogene		9	-1	88122765	662
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000211803	processed_transcript		14	-1	121592444	3667
ENSMUSG00000022362	protein_coding	Gm29394	ENSMUST00000176935	protein_coding	principal5	15	-1	58076425	1326
ENSMUSG00000102075	processed_pseudogene	Gm5368	ENSMUST00000189012	processed_pseudogene		9	1	88145969	589
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000129466	retained_intron		9	-1	67049118	1123
ENSMUSG00000071230	protein_coding	Npw	ENSMUST00000095544	protein_coding	principal1	17	-1	24658457	638
ENSMUSG00000044279	protein_coding	Crb3	ENSMUST00000071826	protein_coding	principal3	17	1	57059105	1194
ENSMUSG00000032366	protein_coding	Tpm1	ENSMUST00000131279	processed_transcript		9	-1	67049191	649
ENSMUSG00000022362	protein_coding	Gm29394	ENSMUST00000177176	protein_coding		15	-1	58076207	400
ENSMUSG00000105943	processed_pseudogene	Gm2965	ENSMUST00000198365	processed_pseudogene		3	1	38223451	343
ENSMUSG00000100782	lincRNA	Gm28231	ENSMUST00000190118	lincRNA		9	1	88259895	2599
ENSMUSG00000022362	protein_coding	Gm29394	ENSMUST00000177504	protein_coding	alternative2	15	-1	58076183	448
ENSMUSG00000106008	lincRNA	Gm42920	ENSMUST00000196616	lincRNA		3	1	38369398	409
ENSMUSG00000100337	processed_pseudogene	Gm5066	ENSMUST00000188479	processed_pseudogene		9	-1	88281190	822
ENSMUSG00000022362	protein_coding	Gm29394	ENSMUST00000176076	protein_coding		15	-1	58076206	281
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000040700	protein_coding	principal3	14	-1	121698417	7803
ENSMUSG00000106485	TEC	3830422I06Rik	ENSMUST00000200199	TEC		3	-1	38420151	1181
ENSMUSG00000111795	processed_pseudogene	Gm47620	ENSMUST00000215074	processed_pseudogene		9	1	88286724	430
ENSMUSG00000044279	protein_coding	Crb3	ENSMUST00000097299	protein_coding	principal3	17	1	57062231	1206
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000212181	protein_coding	alternative2	14	-1	121698417	7368
ENSMUSG00000044279	protein_coding	Crb3	ENSMUST00000169543	protein_coding	alternative2	17	1	57062283	778
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000212416	nonsense_mediated_decay		14	-1	121605244	3043
ENSMUSG00000052271	protein_coding	Bhlha15	ENSMUST00000060747	protein_coding	principal1	5	1	144190286	3494
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000239077	protein_coding	alternative2	14	-1	121738861	6996
ENSMUSG00000044279	protein_coding	Crb3	ENSMUST00000163763	protein_coding	principal3	17	1	57062299	868
ENSMUSG00000044279	protein_coding	Crb3	ENSMUST00000163628	protein_coding		17	1	57062508	373
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000100299	protein_coding	alternative2	14	-1	121797837	6476
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000212719	retained_intron		14	-1	121584726	4023
ENSMUSG00000060112	protein_coding	Olfr60	ENSMUST00000215023	protein_coding	principal1	7	-1	140361653	2692
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000212371	retained_intron		14	-1	121592000	738
ENSMUSG00000004814	protein_coding	Ccl24	ENSMUST00000004936	protein_coding	principal1	5	-1	135573049	1295
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000211907	retained_intron		14	-1	121586746	713
ENSMUSG00000060112	protein_coding	Olfr60	ENSMUST00000211031	protein_coding	principal1	7	-1	140361671	2650
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000211993	retained_intron		14	-1	121598213	755
ENSMUSG00000004814	protein_coding	Ccl24	ENSMUST00000201401	protein_coding	principal1	5	-1	135573049	561
ENSMUSG00000025558	protein_coding	Dock9	ENSMUST00000238406	protein_coding		14	-1	121599821	399
ENSMUSG00000060112	protein_coding	Olfr60	ENSMUST00000216027	protein_coding	principal1	7	-1	140361653	3300
ENSMUSG00000060112	protein_coding	Olfr60	ENSMUST00000210932	protein_coding	principal1	7	-1	140361661	2383
ENSMUSG00000106201	processed_pseudogene	Gm7815	ENSMUST00000196104	processed_pseudogene		3	-1	38439793	832
ENSMUSG00000081194	processed_pseudogene	Gm8424	ENSMUST00000117716	processed_pseudogene		X	-1	150926159	988
ENSMUSG00000060112	protein_coding	Olfr60	ENSMUST00000075470	protein_coding	principal1	7	-1	140345987	936
ENSMUSG00000105516	lincRNA	Gm36823	ENSMUST00000199408	lincRNA		3	-1	38443632	1792
ENSMUSG00000105516	lincRNA	Gm36823	ENSMUST00000198401	lincRNA		3	-1	38443634	610
ENSMUSG00000110257	unprocessed_pseudogene	Olfr529-ps1	ENSMUST00000211097	unprocessed_pseudogene		7	1	140368510	928
ENSMUSG00000032420	protein_coding	Nt5e	ENSMUST00000034992	protein_coding	principal1	9	1	88327197	3995
ENSMUSG00000105516	lincRNA	Gm36823	ENSMUST00000196546	lincRNA		3	-1	38443874	647
ENSMUSG00000032420	protein_coding	Nt5e	ENSMUST00000186789	retained_intron		9	1	88327618	3602
ENSMUSG00000074629	TEC	4930518I15Rik	ENSMUST00000238678	TEC		2	-1	156858212	1597
ENSMUSG00000107029	TEC	Gm43123	ENSMUST00000201893	TEC		5	-1	135617299	3471
ENSMUSG00000074629	TEC	4930518I15Rik	ENSMUST00000099141	TEC		2	-1	156857946	1331
ENSMUSG00000032420	protein_coding	Nt5e	ENSMUST00000187166	retained_intron		9	1	88327633	2646
ENSMUSG00000032420	protein_coding	Nt5e	ENSMUST00000217134	processed_transcript		9	1	88355687	280
ENSMUSG00000060974	protein_coding	Olfr530	ENSMUST00000216727	protein_coding	principal1	7	-1	140376331	1958
ENSMUSG00000060974	protein_coding	Olfr530	ENSMUST00000074177	protein_coding	principal1	7	-1	140373666	1080
ENSMUSG00000062175	protein_coding	Tgif2	ENSMUST00000081335	protein_coding	principal1	2	1	156840007	2900
ENSMUSG00000038828	protein_coding	Tmem214	ENSMUST00000201203	protein_coding	principal2	5	1	30868012	6110
ENSMUSG00000062175	protein_coding	Tgif2	ENSMUST00000073352	protein_coding		2	1	156840100	2690
ENSMUSG00000038828	protein_coding	Tmem214	ENSMUST00000114716	protein_coding	alternative2	5	1	30869631	2220
ENSMUSG00000062175	protein_coding	Tgif2	ENSMUST00000150078	nonsense_mediated_decay		2	1	156841022	484
ENSMUSG00000062175	protein_coding	Tgif2	ENSMUST00000175634	processed_transcript		2	1	156849956	594
ENSMUSG00000062175	protein_coding	Tgif2	ENSMUST00000176281	processed_transcript		2	1	156850836	564
ENSMUSG00000102323	TEC	Gm37790	ENSMUST00000193136	TEC		2	-1	156849715	3346
ENSMUSG00000085741	processed_transcript	5430405H02Rik	ENSMUST00000185402	antisense		2	-1	156862963	904
ENSMUSG00000041134	protein_coding	Cyyr1	ENSMUST00000175700	protein_coding		16	-1	85550417	1294
ENSMUSG00000085741	processed_transcript	5430405H02Rik	ENSMUST00000153616	antisense		2	-1	156862894	1431
ENSMUSG00000085741	processed_transcript	5430405H02Rik	ENSMUST00000176134	antisense		2	-1	156862945	1196
ENSMUSG00000085741	processed_transcript	5430405H02Rik	ENSMUST00000187327	retained_intron		2	-1	156856116	2001
ENSMUSG00000041134	protein_coding	Cyyr1	ENSMUST00000114174	protein_coding	principal1	16	-1	85550417	5464
ENSMUSG00000106562	processed_pseudogene	Gm5981	ENSMUST00000199912	processed_pseudogene		3	-1	122633271	487
ENSMUSG00000041134	protein_coding	Cyyr1	ENSMUST00000163020	retained_intron		16	-1	85553397	2992
ENSMUSG00000041134	protein_coding	Cyyr1	ENSMUST00000162621	processed_transcript		16	-1	85553251	312
ENSMUSG00000016028	protein_coding	Celsr1	ENSMUST00000016172	protein_coding	principal1	15	-1	86034203	11305
ENSMUSG00000089698	processed_pseudogene	Gm2541	ENSMUST00000161209	processed_pseudogene		16	-1	85553943	711
ENSMUSG00000016028	protein_coding	Celsr1	ENSMUST00000226840	protein_coding		15	-1	85978730	6802
ENSMUSG00000016028	protein_coding	Celsr1	ENSMUST00000239489	protein_coding		15	-1	85902199	908
ENSMUSG00000016028	protein_coding	Celsr1	ENSMUST00000239396	protein_coding		15	-1	85901573	713
ENSMUSG00000016028	protein_coding	Celsr1	ENSMUST00000226204	protein_coding		15	-1	85903967	838
ENSMUSG00000027884	protein_coding	Clcc1	ENSMUST00000106609	protein_coding	principal3	3	1	108653913	2043
ENSMUSG00000016028	protein_coding	Celsr1	ENSMUST00000227450	retained_intron		15	-1	85922422	377
ENSMUSG00000027884	protein_coding	Clcc1	ENSMUST00000125274	processed_transcript		3	1	108653949	762
ENSMUSG00000048175	protein_coding	Asb8	ENSMUST00000143400	protein_coding	principal1	15	-1	98165625	2226
ENSMUSG00000027884	protein_coding	Clcc1	ENSMUST00000130352	processed_transcript		3	1	108653957	895
ENSMUSG00000027884	protein_coding	Clcc1	ENSMUST00000124384	protein_coding		3	1	108653958	358
ENSMUSG00000027884	protein_coding	Clcc1	ENSMUST00000029483	protein_coding	principal3	3	1	108653958	2224
ENSMUSG00000048175	protein_coding	Asb8	ENSMUST00000059112	protein_coding	principal1	15	-1	98145659	1049
ENSMUSG00000027884	protein_coding	Clcc1	ENSMUST00000106613	protein_coding	alternative2	3	1	108653990	3064
ENSMUSG00000048175	protein_coding	Asb8	ENSMUST00000123626	protein_coding	principal1	15	-1	98145706	1100
ENSMUSG00000048175	protein_coding	Asb8	ENSMUST00000123922	protein_coding	principal1	15	-1	98165560	1162
ENSMUSG00000032094	protein_coding	Cd3d	ENSMUST00000034602	protein_coding	principal1	9	1	44981786	1617
ENSMUSG00000027884	protein_coding	Clcc1	ENSMUST00000139016	processed_transcript		3	1	108663188	795
ENSMUSG00000027884	protein_coding	Clcc1	ENSMUST00000156811	retained_intron		3	1	108667851	469
ENSMUSG00000032094	protein_coding	Cd3d	ENSMUST00000214715	protein_coding		9	1	44985823	286
ENSMUSG00000038828	protein_coding	Tmem214	ENSMUST00000202951	retained_intron		5	1	30869633	3947
ENSMUSG00000032094	protein_coding	Cd3d	ENSMUST00000214800	retained_intron		9	1	44985952	299
ENSMUSG00000029875	protein_coding	Ccdc184	ENSMUST00000031914	protein_coding	principal1	15	1	98167158	2977
ENSMUSG00000038828	protein_coding	Tmem214	ENSMUST00000202050	retained_intron		5	1	30869635	3746
ENSMUSG00000041130	protein_coding	Zfp598	ENSMUST00000234956	protein_coding	principal2	17	1	24669687	3352
ENSMUSG00000032387	protein_coding	Rbpms2	ENSMUST00000169003	protein_coding	alternative2	9	1	65629648	1803
ENSMUSG00000038828	protein_coding	Tmem214	ENSMUST00000201234	retained_intron		5	1	30870364	491
ENSMUSG00000038828	protein_coding	Tmem214	ENSMUST00000202774	processed_transcript		5	1	30871773	600
ENSMUSG00000041130	protein_coding	Zfp598	ENSMUST00000047179	protein_coding	alternative2	17	1	24669747	3283
ENSMUSG00000038828	protein_coding	Tmem214	ENSMUST00000202008	retained_intron		5	1	30871818	2274
ENSMUSG00000107086	TEC	Gm43808	ENSMUST00000202534	TEC		5	-1	30870828	2065
ENSMUSG00000032387	protein_coding	Rbpms2	ENSMUST00000055844	protein_coding	principal2	9	1	65630559	1987
ENSMUSG00000041130	protein_coding	Zfp598	ENSMUST00000234988	retained_intron		17	1	24677142	3285
ENSMUSG00000112620	processed_pseudogene	Gm18972	ENSMUST00000218873	processed_pseudogene		10	1	27870091	630
ENSMUSG00000032387	protein_coding	Rbpms2	ENSMUST00000213927	processed_transcript		9	1	65631077	569
ENSMUSG00000108748	protein_coding	Gm44579	ENSMUST00000142443	protein_coding	principal1	15	-1	98220977	2064
ENSMUSG00000032387	protein_coding	Rbpms2	ENSMUST00000216342	protein_coding		9	1	65631077	594
ENSMUSG00000064208	processed_pseudogene	Gm10145	ENSMUST00000077776	processed_pseudogene		10	1	27936364	462
ENSMUSG00000032387	protein_coding	Rbpms2	ENSMUST00000216382	protein_coding	alternative2	9	1	65631086	573
ENSMUSG00000075427	protein_coding	Olfr288	ENSMUST00000165379	protein_coding	principal1	15	-1	98195542	2083
ENSMUSG00000027883	protein_coding	Gpsm2	ENSMUST00000029482	protein_coding	principal1	3	-1	108722309	3498
ENSMUSG00000032387	protein_coding	Rbpms2	ENSMUST00000216769	retained_intron		9	1	65658977	600
ENSMUSG00000027883	protein_coding	Gpsm2	ENSMUST00000154263	retained_intron		3	-1	108702513	579
ENSMUSG00000075427	protein_coding	Olfr288	ENSMUST00000154964	processed_transcript		15	-1	98195445	694
ENSMUSG00000027883	protein_coding	Gpsm2	ENSMUST00000145558	protein_coding		3	-1	108711670	800
ENSMUSG00000090129	protein_coding	Olfr287	ENSMUST00000206224	processed_transcript		15	-1	98208626	1656
ENSMUSG00000027883	protein_coding	Gpsm2	ENSMUST00000124043	processed_transcript		3	-1	108722116	187
ENSMUSG00000044864	protein_coding	Ankrd50	ENSMUST00000120875	protein_coding	principal1	3	-1	38484844	4945
ENSMUSG00000098800	antisense	Gm27244	ENSMUST00000184260	antisense		3	1	108708908	380
ENSMUSG00000032489	protein_coding	Kif9	ENSMUST00000197248	protein_coding		9	1	110476994	3184
ENSMUSG00000090129	protein_coding	Olfr287	ENSMUST00000170618	protein_coding	principal1	15	-1	98221056	1776
ENSMUSG00000044864	protein_coding	Ankrd50	ENSMUST00000156038	protein_coding		3	-1	38483091	7031
ENSMUSG00000090129	protein_coding	Olfr287	ENSMUST00000155603	processed_transcript		15	-1	98220897	831
ENSMUSG00000043453	protein_coding	Magea10	ENSMUST00000088481	protein_coding	principal1	X	-1	72386858	1821
ENSMUSG00000090129	protein_coding	Olfr287	ENSMUST00000132068	processed_transcript		15	-1	98220901	893
ENSMUSG00000044864	protein_coding	Ankrd50	ENSMUST00000127837	processed_transcript		3	-1	38484815	462
ENSMUSG00000090129	protein_coding	Olfr287	ENSMUST00000145768	processed_transcript		15	-1	98220954	948
ENSMUSG00000044864	protein_coding	Ankrd50	ENSMUST00000094300	protein_coding		3	-1	38455557	1944
ENSMUSG00000002992	protein_coding	Apoc2	ENSMUST00000142352	protein_coding	principal1	7	-1	19677941	727
ENSMUSG00000032489	protein_coding	Kif9	ENSMUST00000061155	protein_coding		9	1	110476994	2956
ENSMUSG00000002992	protein_coding	Apoc2	ENSMUST00000134116	protein_coding	principal1	7	-1	19673920	569
ENSMUSG00000032489	protein_coding	Kif9	ENSMUST00000198043	protein_coding		9	1	110476994	2233
ENSMUSG00000002992	protein_coding	Apoc2	ENSMUST00000003074	protein_coding	principal1	7	-1	19676864	631
ENSMUSG00000059460	protein_coding	Olfr286	ENSMUST00000073612	protein_coding	principal1	15	-1	98234450	3821
ENSMUSG00000032489	protein_coding	Kif9	ENSMUST00000084952	protein_coding	principal1	9	1	110476994	2713
ENSMUSG00000059460	protein_coding	Olfr286	ENSMUST00000206621	processed_transcript		15	-1	98234250	819
ENSMUSG00000059460	protein_coding	Olfr286	ENSMUST00000205393	processed_transcript		15	-1	98234450	797
ENSMUSG00000059460	protein_coding	Olfr286	ENSMUST00000205305	protein_coding		15	-1	98227643	969
ENSMUSG00000074336	protein_coding	Apoc4	ENSMUST00000003071	protein_coding	principal1	7	-1	19681479	538
ENSMUSG00000027636	protein_coding	Sla2	ENSMUST00000029164	protein_coding	principal1	2	-1	156887078	2973
ENSMUSG00000074336	protein_coding	Apoc4	ENSMUST00000209130	retained_intron		7	-1	19681401	2096
ENSMUSG00000027636	protein_coding	Sla2	ENSMUST00000109561	protein_coding	principal1	2	-1	156887192	2634
ENSMUSG00000109350	protein_coding	Gm44805	ENSMUST00000127648	protein_coding	principal1	7	-1	19681423	765
ENSMUSG00000109350	protein_coding	Gm44805	ENSMUST00000150569	protein_coding	principal1	7	-1	19681410	587
ENSMUSG00000068284	protein_coding	Usf3	ENSMUST00000119746	protein_coding	principal2	16	1	44173246	12708
ENSMUSG00000112432	processed_pseudogene	Gm18507	ENSMUST00000218855	processed_pseudogene		10	-1	28066190	525
ENSMUSG00000027637	protein_coding	Rab5if	ENSMUST00000029165	protein_coding	principal1	2	1	156863128	1045
ENSMUSG00000068284	protein_coding	Usf3	ENSMUST00000088356	protein_coding	alternative2	16	1	44173397	757
ENSMUSG00000027637	protein_coding	Rab5if	ENSMUST00000152551	processed_transcript		2	1	156863139	765
ENSMUSG00000027637	protein_coding	Rab5if	ENSMUST00000152942	retained_intron		2	1	156863145	2004
ENSMUSG00000027637	protein_coding	Rab5if	ENSMUST00000126767	processed_transcript		2	1	156872542	553
ENSMUSG00000068284	protein_coding	Usf3	ENSMUST00000141015	retained_intron		16	1	44173397	706
ENSMUSG00000068284	protein_coding	Usf3	ENSMUST00000169582	protein_coding	principal2	16	1	44173397	12604
ENSMUSG00000105360	processed_pseudogene	Gm7824	ENSMUST00000198301	processed_pseudogene		3	-1	38558668	532
ENSMUSG00000111690	TEC	Gm48720	ENSMUST00000216159	TEC		9	-1	45009347	1206
ENSMUSG00000111203	antisense	Gm48719	ENSMUST00000214762	antisense		9	1	44999429	361
ENSMUSG00000022504	protein_coding	Ciita	ENSMUST00000230395	protein_coding	alternative2	16	1	10480059	4237
ENSMUSG00000022504	protein_coding	Ciita	ENSMUST00000230533	retained_intron		16	1	10480151	3228
ENSMUSG00000082001	processed_pseudogene	Gm15607	ENSMUST00000119632	processed_pseudogene		5	-1	135637496	358
ENSMUSG00000022504	protein_coding	Ciita	ENSMUST00000230450	protein_coding	alternative2	16	1	10480164	4360
ENSMUSG00000082446	processed_pseudogene	Gm13863	ENSMUST00000118782	processed_pseudogene		6	-1	34820899	602
ENSMUSG00000082118	processed_pseudogene	Gm13862	ENSMUST00000121220	processed_pseudogene		6	-1	34810827	197
ENSMUSG00000022504	protein_coding	Ciita	ENSMUST00000229906	processed_transcript		16	1	10488178	3772
ENSMUSG00000032093	protein_coding	Cd3e	ENSMUST00000102832	protein_coding	principal1	9	-1	45009613	1462
ENSMUSG00000032093	protein_coding	Cd3e	ENSMUST00000214582	retained_intron		9	-1	45002387	517
ENSMUSG00000022504	protein_coding	Ciita	ENSMUST00000023147	protein_coding	principal2	16	1	10488279	6007
ENSMUSG00000032093	protein_coding	Cd3e	ENSMUST00000214081	retained_intron		9	-1	45009627	2550
ENSMUSG00000022504	protein_coding	Ciita	ENSMUST00000230892	protein_coding		16	1	10489746	680
ENSMUSG00000032093	protein_coding	Cd3e	ENSMUST00000217486	retained_intron		9	-1	45009622	394
ENSMUSG00000022504	protein_coding	Ciita	ENSMUST00000230146	protein_coding	alternative2	16	1	10489781	3953
ENSMUSG00000022504	protein_coding	Ciita	ENSMUST00000230392	protein_coding		16	1	10489783	1620
ENSMUSG00000039917	protein_coding	Rhbdd2	ENSMUST00000043707	protein_coding	principal1	5	1	135632618	4207
ENSMUSG00000038055	protein_coding	Dexi	ENSMUST00000184863	protein_coding	principal1	16	-1	10543054	2537
ENSMUSG00000038055	protein_coding	Dexi	ENSMUST00000183355	processed_transcript		16	-1	10531809	816
ENSMUSG00000038055	protein_coding	Dexi	ENSMUST00000038281	protein_coding	principal1	16	-1	10543054	1389
ENSMUSG00000103760	processed_pseudogene	Gm8009	ENSMUST00000191672	processed_pseudogene		1	1	34970065	436
ENSMUSG00000039917	protein_coding	Rhbdd2	ENSMUST00000136748	nonsense_mediated_decay		5	1	135632654	4363
ENSMUSG00000039917	protein_coding	Rhbdd2	ENSMUST00000130647	processed_transcript		5	1	135632704	361
ENSMUSG00000039917	protein_coding	Rhbdd2	ENSMUST00000144633	retained_intron		5	1	135632716	715
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000202017	retained_intron		6	1	34780432	3397
ENSMUSG00000027998	protein_coding	Plrg1	ENSMUST00000150268	protein_coding	principal1	3	1	83055522	1851
ENSMUSG00000039917	protein_coding	Rhbdd2	ENSMUST00000129134	retained_intron		5	1	135632723	867
ENSMUSG00000095954	protein_coding	Gm3183	ENSMUST00000202911	protein_coding	alternative2	5	1	94865436	1303
ENSMUSG00000039917	protein_coding	Rhbdd2	ENSMUST00000199368	nonsense_mediated_decay		5	1	135635102	735
ENSMUSG00000095954	protein_coding	Gm3183	ENSMUST00000201703	protein_coding	principal5	5	1	94865453	2048
ENSMUSG00000027998	protein_coding	Plrg1	ENSMUST00000029628	nonsense_mediated_decay		3	1	83055532	1749
ENSMUSG00000039917	protein_coding	Rhbdd2	ENSMUST00000084599	retained_intron		5	1	135636532	4207
ENSMUSG00000027998	protein_coding	Plrg1	ENSMUST00000122128	protein_coding		3	1	83055555	1608
ENSMUSG00000106168	lincRNA	Gm43538	ENSMUST00000200416	lincRNA		3	1	38614247	849
ENSMUSG00000027998	protein_coding	Plrg1	ENSMUST00000151915	retained_intron		3	1	83068044	911
ENSMUSG00000027998	protein_coding	Plrg1	ENSMUST00000135813	retained_intron		3	1	83068973	564
ENSMUSG00000044791	protein_coding	Setd2	ENSMUST00000153838	protein_coding	principal1	9	1	110532597	8350
ENSMUSG00000095954	protein_coding	Gm3183	ENSMUST00000180076	protein_coding	alternative2	5	1	94873797	1446
ENSMUSG00000103997	processed_pseudogene	Gm38027	ENSMUST00000192315	processed_pseudogene		1	1	34985656	235
ENSMUSG00000104417	lincRNA	Gm37068	ENSMUST00000195168	lincRNA		1	-1	35651297	640
ENSMUSG00000108420	TEC	Gm45141	ENSMUST00000206502	TEC		7	1	126395858	1888
ENSMUSG00000044791	protein_coding	Setd2	ENSMUST00000196814	nonsense_mediated_decay		9	1	110547970	7442
ENSMUSG00000044791	protein_coding	Setd2	ENSMUST00000198823	protein_coding		9	1	110551296	713
ENSMUSG00000044791	protein_coding	Setd2	ENSMUST00000195911	retained_intron		9	1	110561122	529
ENSMUSG00000030722	protein_coding	Nfatc2ip	ENSMUST00000075671	protein_coding	principal1	7	-1	126396737	3388
ENSMUSG00000044791	protein_coding	Setd2	ENSMUST00000198587	retained_intron		9	1	110561204	1398
ENSMUSG00000043286	protein_coding	Pnpla1	ENSMUST00000056866	protein_coding	principal1	17	1	28858411	4484
ENSMUSG00000030722	protein_coding	Nfatc2ip	ENSMUST00000142947	protein_coding		7	-1	126390557	435
ENSMUSG00000043286	protein_coding	Pnpla1	ENSMUST00000114737	processed_transcript		17	1	28858518	2170
ENSMUSG00000044791	protein_coding	Setd2	ENSMUST00000200460	protein_coding		9	1	110573622	2910
ENSMUSG00000059456	protein_coding	Ptk2b	ENSMUST00000022622	protein_coding	alternative1	14	-1	66281052	4034
ENSMUSG00000087615	antisense	Pnpla1os	ENSMUST00000232781	antisense		17	-1	28859508	568
ENSMUSG00000044791	protein_coding	Setd2	ENSMUST00000197655	nonsense_mediated_decay		9	1	110573884	1173
ENSMUSG00000087615	antisense	Pnpla1os	ENSMUST00000146779	antisense		17	-1	28859503	3946
ENSMUSG00000059456	protein_coding	Ptk2b	ENSMUST00000154865	protein_coding		14	-1	66170282	1940
ENSMUSG00000044791	protein_coding	Setd2	ENSMUST00000198697	retained_intron		9	1	110594290	1735
ENSMUSG00000044791	protein_coding	Setd2	ENSMUST00000197399	nonsense_mediated_decay		9	1	110602174	767
ENSMUSG00000059456	protein_coding	Ptk2b	ENSMUST00000089250	protein_coding	principal3	14	-1	66281052	3903
ENSMUSG00000044791	protein_coding	Setd2	ENSMUST00000197260	retained_intron		9	1	110617601	1007
ENSMUSG00000025266	protein_coding	Gnl3l	ENSMUST00000112691	protein_coding	principal1	X	-1	151017322	4869
ENSMUSG00000109690	processed_pseudogene	Gm6376	ENSMUST00000209407	processed_pseudogene		7	-1	140386344	580
ENSMUSG00000104983	TEC	Gm42763	ENSMUST00000199595	TEC		9	1	110543211	2087
ENSMUSG00000059456	protein_coding	Ptk2b	ENSMUST00000136216	retained_intron		14	-1	66160678	3478
ENSMUSG00000025266	protein_coding	Gnl3l	ENSMUST00000026297	protein_coding	principal1	X	-1	151017322	4865
ENSMUSG00000025266	protein_coding	Gnl3l	ENSMUST00000146742	retained_intron		X	-1	150993972	642
ENSMUSG00000025266	protein_coding	Gnl3l	ENSMUST00000138026	retained_intron		X	-1	150999778	509
ENSMUSG00000062712	protein_coding	Olfr531	ENSMUST00000080153	protein_coding	principal1	7	-1	140402918	2320
ENSMUSG00000062712	protein_coding	Olfr531	ENSMUST00000217032	processed_transcript		7	-1	140402918	2186
ENSMUSG00000059456	protein_coding	Ptk2b	ENSMUST00000111121	protein_coding		14	-1	66280982	3365
ENSMUSG00000025266	protein_coding	Gnl3l	ENSMUST00000154393	protein_coding		X	-1	151017322	815
ENSMUSG00000062712	protein_coding	Olfr531	ENSMUST00000216053	protein_coding	principal1	7	-1	140402918	2330
ENSMUSG00000059456	protein_coding	Ptk2b	ENSMUST00000148104	retained_intron		14	-1	66163906	1284
ENSMUSG00000025266	protein_coding	Gnl3l	ENSMUST00000124022	nonsense_mediated_decay		X	-1	151017322	593
ENSMUSG00000062712	protein_coding	Olfr531	ENSMUST00000217167	protein_coding	principal1	7	-1	140402918	3874
ENSMUSG00000025266	protein_coding	Gnl3l	ENSMUST00000156233	protein_coding		X	-1	151017322	439
ENSMUSG00000059456	protein_coding	Ptk2b	ENSMUST00000127083	retained_intron		14	-1	66280992	2053
ENSMUSG00000081782	processed_pseudogene	Gm15152	ENSMUST00000121540	processed_pseudogene		X	1	151005870	394
ENSMUSG00000059456	protein_coding	Ptk2b	ENSMUST00000178730	protein_coding	alternative1	14	-1	66213552	3863
ENSMUSG00000063823	protein_coding	Olfr532	ENSMUST00000213172	processed_transcript		7	-1	140421614	3766
ENSMUSG00000117458	processed_pseudogene	Gm6552	ENSMUST00000234229	processed_pseudogene		17	-1	79934572	1061
ENSMUSG00000063823	protein_coding	Olfr532	ENSMUST00000213801	protein_coding	principal1	7	-1	140421639	4232
ENSMUSG00000105015	processed_pseudogene	Gm6059	ENSMUST00000196903	processed_pseudogene		3	-1	142184751	340
ENSMUSG00000063823	protein_coding	Olfr532	ENSMUST00000073226	protein_coding	principal1	7	-1	140419771	930
ENSMUSG00000117415	lincRNA	Gm41625	ENSMUST00000234800	lincRNA		17	-1	79981662	1598
ENSMUSG00000116972	processed_pseudogene	Gm6278	ENSMUST00000231765	processed_pseudogene		16	1	85644252	772
ENSMUSG00000032491	protein_coding	Nradd	ENSMUST00000035069	protein_coding	principal1	9	-1	110624452	1223
ENSMUSG00000040652	protein_coding	Oaz2	ENSMUST00000128928	processed_transcript		9	1	65668001	643
ENSMUSG00000022218	protein_coding	Tgm1	ENSMUST00000002389	protein_coding	principal1	14	-1	55713088	2791
ENSMUSG00000040652	protein_coding	Oaz2	ENSMUST00000154502	processed_transcript		9	1	65669712	393
ENSMUSG00000032491	protein_coding	Nradd	ENSMUST00000196735	protein_coding		9	-1	110623322	799
ENSMUSG00000032491	protein_coding	Nradd	ENSMUST00000196876	protein_coding		9	-1	110624378	354
ENSMUSG00000102692	protein_coding	Dchs2	ENSMUST00000191829	protein_coding	principal1	3	1	83127948	10783
ENSMUSG00000022218	protein_coding	Tgm1	ENSMUST00000178034	protein_coding	principal1	14	-1	55713494	2730
ENSMUSG00000032491	protein_coding	Nradd	ENSMUST00000197894	retained_intron		9	-1	110624431	773
ENSMUSG00000022218	protein_coding	Tgm1	ENSMUST00000226907	protein_coding		14	-1	55713089	605
ENSMUSG00000074517	lincRNA	Gm10710	ENSMUST00000047876	lincRNA		3	-1	83129246	3971
ENSMUSG00000022218	protein_coding	Tgm1	ENSMUST00000227958	protein_coding		14	-1	55713926	652
ENSMUSG00000022218	protein_coding	Tgm1	ENSMUST00000228123	protein_coding		14	-1	55713492	558
ENSMUSG00000032274	protein_coding	Cyp19a1	ENSMUST00000215736	protein_coding	alternative2	9	-1	54193522	2451
ENSMUSG00000032274	protein_coding	Cyp19a1	ENSMUST00000217040	retained_intron		9	-1	54182074	1942
ENSMUSG00000022218	protein_coding	Tgm1	ENSMUST00000168729	protein_coding	principal1	14	-1	55713492	2852
ENSMUSG00000032274	protein_coding	Cyp19a1	ENSMUST00000214358	processed_transcript		9	-1	54268110	201
ENSMUSG00000032274	protein_coding	Cyp19a1	ENSMUST00000216974	processed_transcript		9	-1	54202221	373
ENSMUSG00000115154	antisense	Gm49067	ENSMUST00000227106	antisense		14	1	55681918	449
ENSMUSG00000032274	protein_coding	Cyp19a1	ENSMUST00000034811	protein_coding	principal2	9	-1	54193442	2373
ENSMUSG00000056883	protein_coding	Olfr533	ENSMUST00000211093	protein_coding	principal1	7	1	140463370	2397
ENSMUSG00000056883	protein_coding	Olfr533	ENSMUST00000216292	processed_transcript		7	1	140463377	1653
ENSMUSG00000056883	protein_coding	Olfr533	ENSMUST00000216258	protein_coding	principal1	7	1	140463377	2874
ENSMUSG00000056883	protein_coding	Olfr533	ENSMUST00000215308	protein_coding	principal1	7	1	140463390	2345
ENSMUSG00000056883	protein_coding	Olfr533	ENSMUST00000217179	protein_coding	principal1	7	1	140463392	2825
ENSMUSG00000040652	protein_coding	Oaz2	ENSMUST00000153700	protein_coding	principal2	9	1	65676548	1843
ENSMUSG00000056883	protein_coding	Olfr533	ENSMUST00000071755	protein_coding	principal1	7	1	140466158	1052
ENSMUSG00000040652	protein_coding	Oaz2	ENSMUST00000137696	retained_intron		9	1	65676579	1095
ENSMUSG00000103895	TEC	Gm37942	ENSMUST00000191875	TEC		1	1	193366840	628
ENSMUSG00000103459	lincRNA	Gm38096	ENSMUST00000193692	lincRNA		3	1	83403402	2389
ENSMUSG00000040652	protein_coding	Oaz2	ENSMUST00000136166	protein_coding		9	1	65676591	700
ENSMUSG00000040652	protein_coding	Oaz2	ENSMUST00000128664	protein_coding		9	1	65687806	865
ENSMUSG00000040652	protein_coding	Oaz2	ENSMUST00000046490	protein_coding	alternative1	9	1	65676548	1840
ENSMUSG00000106376	transcribed_processed_pseudogene	Gm34139	ENSMUST00000196166	transcribed_processed_pseudogene		3	-1	122788514	294
ENSMUSG00000106583	processed_transcript	4930447N08Rik	ENSMUST00000196290	antisense		3	-1	122801949	497
ENSMUSG00000106583	processed_transcript	4930447N08Rik	ENSMUST00000200530	retained_intron		3	-1	122802048	369
ENSMUSG00000106583	processed_transcript	4930447N08Rik	ENSMUST00000198715	processed_transcript		3	-1	122801894	263
ENSMUSG00000106583	processed_transcript	4930447N08Rik	ENSMUST00000198879	antisense		3	-1	122801981	1157
ENSMUSG00000048905	protein_coding	Bnip5	ENSMUST00000062357	protein_coding	principal1	17	-1	28915324	4597
ENSMUSG00000048905	protein_coding	Bnip5	ENSMUST00000228025	protein_coding		17	-1	28905700	398
ENSMUSG00000085333	antisense	1700030A11Rik	ENSMUST00000125317	antisense		17	1	28905265	888
ENSMUSG00000016758	protein_coding	Bik	ENSMUST00000016902	protein_coding	principal1	15	1	83526862	942
ENSMUSG00000101334	lincRNA	1700028M03Rik	ENSMUST00000185938	lincRNA		3	-1	83574122	476
ENSMUSG00000016758	protein_coding	Bik	ENSMUST00000230912	protein_coding	principal1	15	1	83526872	1335
ENSMUSG00000110169	unprocessed_pseudogene	Olfr534-ps1	ENSMUST00000211776	unprocessed_pseudogene		7	-1	140479629	870
ENSMUSG00000016758	protein_coding	Bik	ENSMUST00000229165	protein_coding		15	1	83533544	550
ENSMUSG00000016758	protein_coding	Bik	ENSMUST00000229964	protein_coding		15	1	83542538	650
ENSMUSG00000016179	protein_coding	Camk1g	ENSMUST00000169907	protein_coding		1	-1	193370225	1968
ENSMUSG00000116217	processed_pseudogene	Gm46495	ENSMUST00000229232	processed_pseudogene		15	-1	83538676	538
ENSMUSG00000028541	protein_coding	B4galt2	ENSMUST00000084325	nonsense_mediated_decay		4	-1	117883155	4093
ENSMUSG00000016179	protein_coding	Camk1g	ENSMUST00000016323	protein_coding	principal1	1	-1	193370298	2469
ENSMUSG00000016179	protein_coding	Camk1g	ENSMUST00000163202	protein_coding		1	-1	193359778	754
ENSMUSG00000016179	protein_coding	Camk1g	ENSMUST00000165718	retained_intron		1	-1	193370245	783
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000115016	protein_coding	alternative2	6	1	34780432	3734
ENSMUSG00000028541	protein_coding	B4galt2	ENSMUST00000167443	nonsense_mediated_decay		4	-1	117883476	2466
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000115017	protein_coding	principal3	6	1	34780432	3719
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000135304	nonsense_mediated_decay		6	1	34780442	3384
ENSMUSG00000028541	protein_coding	B4galt2	ENSMUST00000030266	protein_coding	principal1	4	-1	117883487	2312
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000143474	retained_intron		6	1	34780452	1931
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000148834	nonsense_mediated_decay		6	1	34780848	4819
ENSMUSG00000028541	protein_coding	B4galt2	ENSMUST00000106421	protein_coding	principal1	4	-1	117883112	1801
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000115012	protein_coding		6	1	34780875	790
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000155726	retained_intron		6	1	34780875	3764
ENSMUSG00000028541	protein_coding	B4galt2	ENSMUST00000153358	protein_coding		4	-1	117883155	696
ENSMUSG00000053965	protein_coding	Pde5a	ENSMUST00000066728	protein_coding		3	1	122728947	6939
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000155890	retained_intron		6	1	34780876	3264
ENSMUSG00000028541	protein_coding	B4galt2	ENSMUST00000137016	processed_transcript		4	-1	117883219	396
ENSMUSG00000040524	protein_coding	Zfp609	ENSMUST00000159109	protein_coding	principal1	9	-1	65827564	7777
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000115014	protein_coding		6	1	34780889	805
ENSMUSG00000028541	protein_coding	B4galt2	ENSMUST00000171548	protein_coding		4	-1	117882291	794
ENSMUSG00000040524	protein_coding	Zfp609	ENSMUST00000159878	processed_transcript		9	-1	65701144	483
ENSMUSG00000053965	protein_coding	Pde5a	ENSMUST00000200389	protein_coding	principal1	3	1	122729570	7603
ENSMUSG00000038836	protein_coding	Agbl3	ENSMUST00000115009	protein_coding		6	1	34780890	806
ENSMUSG00000040524	protein_coding	Zfp609	ENSMUST00000160747	protein_coding		9	-1	65797912	597
ENSMUSG00000091237	3prime_overlapping_ncRNA	Gm17114	ENSMUST00000164716	3prime_overlapping_ncRNA		4	-1	117868558	511
ENSMUSG00000053965	protein_coding	Pde5a	ENSMUST00000198314	retained_intron		3	1	122730222	2987
ENSMUSG00000082920	processed_pseudogene	Gm13864	ENSMUST00000119745	processed_pseudogene		6	1	34786679	785
ENSMUSG00000053965	protein_coding	Pde5a	ENSMUST00000199253	processed_transcript		3	1	122795234	418
ENSMUSG00000025401	protein_coding	Myo1a	ENSMUST00000079590	protein_coding	principal1	10	1	127705170	3439
ENSMUSG00000083831	processed_pseudogene	Gm14248	ENSMUST00000117790	processed_pseudogene		2	1	156889464	544
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000114513	protein_coding	principal3	1	-1	52233223	4966
ENSMUSG00000025401	protein_coding	Myo1a	ENSMUST00000219882	retained_intron		10	1	127719328	1062
ENSMUSG00000046167	protein_coding	Gldn	ENSMUST00000056740	protein_coding	principal1	9	1	54286486	4658
ENSMUSG00000102137	processed_pseudogene	Rpl28-ps2	ENSMUST00000194739	processed_pseudogene		3	1	83686721	554
ENSMUSG00000074343	antisense	Gldnos	ENSMUST00000149237	antisense		9	-1	54301570	841
ENSMUSG00000080880	unprocessed_pseudogene	Gm14278	ENSMUST00000117381	unprocessed_pseudogene		2	-1	156915383	878
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000114512	protein_coding	alternative2	1	-1	52232296	2042
ENSMUSG00000081616	processed_pseudogene	Gm14247	ENSMUST00000120950	processed_pseudogene		2	-1	156893118	237
ENSMUSG00000102648	processed_pseudogene	Gm38022	ENSMUST00000191762	processed_pseudogene		1	1	193475290	403
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000156887	protein_coding		1	-1	52190909	646
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000136654	retained_intron		1	-1	52168975	691
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000126221	retained_intron		1	-1	52169145	758
ENSMUSG00000078588	protein_coding	Ccdc24	ENSMUST00000164853	protein_coding		4	-1	117872229	3990
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000138906	retained_intron		1	-1	52190910	434
ENSMUSG00000078588	protein_coding	Ccdc24	ENSMUST00000163974	processed_transcript		4	-1	117868973	590
ENSMUSG00000048755	protein_coding	Mcat	ENSMUST00000061882	protein_coding	principal1	15	-1	83555735	1917
ENSMUSG00000078588	protein_coding	Ccdc24	ENSMUST00000154439	retained_intron		4	-1	117871295	1714
ENSMUSG00000048755	protein_coding	Mcat	ENSMUST00000230851	protein_coding		15	-1	83555365	740
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000114510	protein_coding	alternative2	1	-1	52233232	5596
ENSMUSG00000048755	protein_coding	Mcat	ENSMUST00000229724	protein_coding		15	-1	83552887	688
ENSMUSG00000048755	protein_coding	Mcat	ENSMUST00000230094	processed_transcript		15	-1	83563787	326
ENSMUSG00000078588	protein_coding	Ccdc24	ENSMUST00000106422	protein_coding		4	-1	117872554	1365
ENSMUSG00000048755	protein_coding	Mcat	ENSMUST00000229177	retained_intron		15	-1	83555685	544
ENSMUSG00000048755	protein_coding	Mcat	ENSMUST00000230672	protein_coding		15	-1	83555617	386
ENSMUSG00000078588	protein_coding	Ccdc24	ENSMUST00000167287	protein_coding		4	-1	117871101	643
ENSMUSG00000078588	protein_coding	Ccdc24	ENSMUST00000171052	protein_coding	principal1	4	-1	117872520	891
ENSMUSG00000078588	protein_coding	Ccdc24	ENSMUST00000130758	processed_transcript		4	-1	117871329	638
ENSMUSG00000078588	protein_coding	Ccdc24	ENSMUST00000131938	nonsense_mediated_decay		4	-1	117872557	377
ENSMUSG00000041736	protein_coding	Tspo	ENSMUST00000047419	protein_coding	principal1	15	1	83563592	837
ENSMUSG00000078588	protein_coding	Ccdc24	ENSMUST00000166325	protein_coding		4	-1	117872520	561
ENSMUSG00000041736	protein_coding	Tspo	ENSMUST00000208463	protein_coding		15	1	83563875	551
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000114509	retained_intron		1	-1	52200482	3716
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000155587	protein_coding		1	-1	52212209	3252
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000129107	protein_coding		1	-1	52190909	368
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000123324	retained_intron		1	-1	52197374	947
ENSMUSG00000024095	protein_coding	Hnrnpll	ENSMUST00000184635	protein_coding	principal1	17	-1	80062227	3009
ENSMUSG00000024095	protein_coding	Hnrnpll	ENSMUST00000184297	nonsense_mediated_decay		17	-1	80062227	2742
ENSMUSG00000024095	protein_coding	Hnrnpll	ENSMUST00000183516	retained_intron		17	-1	80035556	1868
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000139273	processed_transcript		1	-1	52215594	836
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000148917	retained_intron		1	-1	52200374	2793
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000147825	retained_intron		1	-1	52215594	680
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000145514	retained_intron		1	-1	52214533	2399
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000151694	retained_intron		1	-1	52215943	682
ENSMUSG00000026103	protein_coding	Gls	ENSMUST00000142976	processed_transcript		1	-1	52232811	487
ENSMUSG00000024095	protein_coding	Hnrnpll	ENSMUST00000184578	retained_intron		17	-1	80062194	2765
ENSMUSG00000110608	processed_pseudogene	Gm8838	ENSMUST00000212978	processed_pseudogene		8	1	105503406	541
ENSMUSG00000024095	protein_coding	Hnrnpll	ENSMUST00000184889	retained_intron		17	-1	80062135	4651
ENSMUSG00000024095	protein_coding	Hnrnpll	ENSMUST00000184726	retained_intron		17	-1	80062268	3019
ENSMUSG00000024095	protein_coding	Hnrnpll	ENSMUST00000061331	protein_coding	principal1	17	-1	80062334	3116
ENSMUSG00000031891	protein_coding	Hsd11b2	ENSMUST00000034363	protein_coding	principal1	8	1	105518755	1840
ENSMUSG00000117518	processed_pseudogene	Gpx4-ps1	ENSMUST00000234039	processed_pseudogene		17	1	80054026	531
ENSMUSG00000102981	TEC	Gm38322	ENSMUST00000194074	TEC		1	1	193493587	2300
ENSMUSG00000097850	lincRNA	Mir205hg	ENSMUST00000180420	lincRNA		1	-1	193510174	2112
ENSMUSG00000104182	processed_pseudogene	Gm21362	ENSMUST00000194272	processed_pseudogene		1	1	193867009	928
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000133191	protein_coding	alternative2	9	-1	110654161	8782
ENSMUSG00000103692	lincRNA	4930503O07Rik	ENSMUST00000193395	lincRNA		1	-1	194222759	578
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000085701	protein_coding	principal1	5	-1	144223615	5106
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000196488	protein_coding	alternative2	9	-1	110654142	8599
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000131017	protein_coding		9	-1	110632051	3303
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000130024	protein_coding		9	-1	110638617	6180
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000126088	retained_intron		9	-1	110628884	432
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000129095	retained_intron		9	-1	110629668	664
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000123996	nonsense_mediated_decay		9	-1	110634449	457
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000138072	retained_intron		9	-1	110631880	479
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000153960	retained_intron		9	-1	110635087	295
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000149089	protein_coding		9	-1	110645368	1869
ENSMUSG00000056724	protein_coding	Nbeal2	ENSMUST00000167320	protein_coding	principal2	9	-1	110654161	8803
ENSMUSG00000025265	protein_coding	Fgd1	ENSMUST00000112685	protein_coding		X	1	151046150	3240
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000153103	retained_intron		5	-1	144223547	4329
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000125672	retained_intron		5	-1	144198195	923
ENSMUSG00000105127	lincRNA	Gm42470	ENSMUST00000198086	lincRNA		9	1	110655679	251
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000140524	retained_intron		5	-1	144199011	877
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000151479	retained_intron		5	-1	144199786	783
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000147992	retained_intron		5	-1	144203580	677
ENSMUSG00000025265	protein_coding	Fgd1	ENSMUST00000026296	protein_coding	principal1	X	1	151047170	4001
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000130962	processed_transcript		5	-1	144208639	209
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000153751	retained_intron		5	-1	144215659	2760
ENSMUSG00000025265	protein_coding	Fgd1	ENSMUST00000124882	retained_intron		X	1	151067383	861
ENSMUSG00000025265	protein_coding	Fgd1	ENSMUST00000125620	retained_intron		X	1	151086110	594
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000137149	retained_intron		5	-1	144223552	2743
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000156129	retained_intron		5	-1	144223606	1742
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000136018	retained_intron		5	-1	144223558	493
ENSMUSG00000066621	protein_coding	Tecpr1	ENSMUST00000196360	retained_intron		5	-1	144223523	3136
ENSMUSG00000022420	protein_coding	Dnal4	ENSMUST00000069877	protein_coding		15	-1	79774383	1011
ENSMUSG00000063230	protein_coding	Olfr535	ENSMUST00000214296	protein_coding	principal1	7	1	140484216	5120
ENSMUSG00000025264	protein_coding	Tsr2	ENSMUST00000112683	protein_coding	principal3	X	-1	151096543	3796
ENSMUSG00000022420	protein_coding	Dnal4	ENSMUST00000023055	protein_coding	principal1	15	-1	79774467	1472
ENSMUSG00000063230	protein_coding	Olfr535	ENSMUST00000216585	nonsense_mediated_decay		7	1	140484216	3071
ENSMUSG00000022420	protein_coding	Dnal4	ENSMUST00000230645	protein_coding		15	-1	79764881	660
ENSMUSG00000063230	protein_coding	Olfr535	ENSMUST00000216962	processed_transcript		7	1	140484216	4835
ENSMUSG00000025264	protein_coding	Tsr2	ENSMUST00000166010	nonsense_mediated_decay		X	-1	151096543	1318
ENSMUSG00000063230	protein_coding	Olfr535	ENSMUST00000213715	protein_coding	principal1	7	1	140484234	5033
ENSMUSG00000025264	protein_coding	Tsr2	ENSMUST00000166689	processed_transcript		X	-1	151096523	909
ENSMUSG00000019659	protein_coding	Ccdc12	ENSMUST00000019803	protein_coding	principal1	9	1	110656503	834
ENSMUSG00000063230	protein_coding	Olfr535	ENSMUST00000213339	processed_transcript		7	1	140484244	2852
ENSMUSG00000063230	protein_coding	Olfr535	ENSMUST00000217235	protein_coding	principal1	7	1	140484244	5186
ENSMUSG00000022420	protein_coding	Dnal4	ENSMUST00000162713	protein_coding	principal1	15	-1	79776972	1357
ENSMUSG00000019659	protein_coding	Ccdc12	ENSMUST00000198077	retained_intron		9	1	110656525	1150
ENSMUSG00000027550	protein_coding	Lrrcc1	ENSMUST00000108370	protein_coding	principal3	3	1	14533788	3359
ENSMUSG00000025264	protein_coding	Tsr2	ENSMUST00000026295	protein_coding	alternative1	X	-1	151096543	3804
ENSMUSG00000063230	protein_coding	Olfr535	ENSMUST00000217580	nonsense_mediated_decay		7	1	140484303	2850
ENSMUSG00000022420	protein_coding	Dnal4	ENSMUST00000229644	protein_coding		15	-1	79774416	600
ENSMUSG00000019659	protein_coding	Ccdc12	ENSMUST00000196092	retained_intron		9	1	110656530	478
ENSMUSG00000063230	protein_coding	Olfr535	ENSMUST00000074897	protein_coding	principal1	7	1	140492617	991
ENSMUSG00000019659	protein_coding	Ccdc12	ENSMUST00000196347	protein_coding		9	1	110656538	451
ENSMUSG00000022420	protein_coding	Dnal4	ENSMUST00000161646	processed_transcript		15	-1	79777849	695
ENSMUSG00000019659	protein_coding	Ccdc12	ENSMUST00000199687	retained_intron		9	1	110656542	477
ENSMUSG00000027550	protein_coding	Lrrcc1	ENSMUST00000169079	protein_coding	alternative2	3	1	14533823	5638
ENSMUSG00000019659	protein_coding	Ccdc12	ENSMUST00000199611	processed_transcript		9	1	110656612	435
ENSMUSG00000019659	protein_coding	Ccdc12	ENSMUST00000195979	processed_transcript		9	1	110666925	592
ENSMUSG00000019659	protein_coding	Ccdc12	ENSMUST00000200296	protein_coding		9	1	110709894	599
ENSMUSG00000019659	protein_coding	Ccdc12	ENSMUST00000200550	retained_intron		9	1	110710011	571
ENSMUSG00000019659	protein_coding	Ccdc12	ENSMUST00000196542	retained_intron		9	1	110710044	497
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000162517	protein_coding	principal4	15	1	78428564	901
ENSMUSG00000104945	antisense	Gm35715	ENSMUST00000197421	antisense		9	-1	110674954	2054
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000166142	protein_coding	alternative2	15	1	78428564	1632
ENSMUSG00000045378	protein_coding	Pxt1	ENSMUST00000051526	protein_coding	principal2	17	-1	28942264	1019
ENSMUSG00000027550	protein_coding	Lrrcc1	ENSMUST00000091325	protein_coding	alternative2	3	1	14533824	3391
ENSMUSG00000045378	protein_coding	Pxt1	ENSMUST00000233413	protein_coding		17	-1	28942264	1034
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000089414	protein_coding		15	1	78428628	1180
ENSMUSG00000045378	protein_coding	Pxt1	ENSMUST00000232977	protein_coding	alternative2	17	-1	28943840	296
ENSMUSG00000027550	protein_coding	Lrrcc1	ENSMUST00000163660	protein_coding		3	1	14533879	2364
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000063857	protein_coding	principal1	4	1	117834506	3146
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000159771	protein_coding		15	1	78428662	986
ENSMUSG00000027550	protein_coding	Lrrcc1	ENSMUST00000165436	nonsense_mediated_decay		3	1	14533934	1518
ENSMUSG00000087693	antisense	Gm16191	ENSMUST00000148464	antisense		17	1	28925463	484
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000151316	protein_coding		4	1	117834995	244
ENSMUSG00000087693	antisense	Gm16191	ENSMUST00000141445	antisense		17	1	28934421	520
ENSMUSG00000027550	protein_coding	Lrrcc1	ENSMUST00000167858	protein_coding		3	1	14548117	3700
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000161016	retained_intron		15	1	78428691	750
ENSMUSG00000027550	protein_coding	Lrrcc1	ENSMUST00000171620	nonsense_mediated_decay		3	1	14548193	794
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000162321	nonsense_mediated_decay		15	1	78428796	855
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000229290	protein_coding		15	1	78429690	539
ENSMUSG00000027550	protein_coding	Lrrcc1	ENSMUST00000169799	protein_coding		3	1	14550380	691
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000030269	protein_coding	principal1	4	1	117835051	3479
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000229622	protein_coding		15	1	78430051	706
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000162808	protein_coding		15	1	78430086	655
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000149168	nonsense_mediated_decay		4	1	117835333	2834
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000069221	protein_coding	principal3	9	-1	88482559	9450
ENSMUSG00000097250	antisense	Gm26771	ENSMUST00000180472	antisense		3	-1	83789956	1082
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000160916	retained_intron		15	1	78432987	1146
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000169885	protein_coding		4	1	117835397	1876
ENSMUSG00000035473	protein_coding	Galm	ENSMUST00000039205	protein_coding	principal1	17	1	80127471	2314
ENSMUSG00000033287	protein_coding	Kctd17	ENSMUST00000162605	retained_intron		15	1	78433982	671
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000136476	processed_transcript		4	1	117835438	488
ENSMUSG00000035473	protein_coding	Galm	ENSMUST00000133955	protein_coding		17	1	80145152	596
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000132043	protein_coding		4	1	117849193	1194
ENSMUSG00000027996	protein_coding	Sfrp2	ENSMUST00000029625	protein_coding	principal1	3	1	83766321	2003
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000169990	protein_coding		4	1	117849199	1344
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000174391	protein_coding		9	-1	88482248	6257
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000163288	protein_coding		4	1	117849370	2107
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000174688	protein_coding		9	-1	88480765	3176
ENSMUSG00000027996	protein_coding	Sfrp2	ENSMUST00000140261	processed_transcript		3	1	83766565	600
ENSMUSG00000027996	protein_coding	Sfrp2	ENSMUST00000154794	processed_transcript		3	1	83766853	382
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000123994	protein_coding		4	1	117855492	456
ENSMUSG00000018378	protein_coding	Cuedc1	ENSMUST00000131964	processed_transcript		11	1	88098058	1505
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000174269	protein_coding		9	-1	88482131	3286
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000135769	processed_transcript		4	1	117855544	370
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000174282	protein_coding	alternative1	9	-1	88482196	3404
ENSMUSG00000028542	protein_coding	Slc6a9	ENSMUST00000170733	retained_intron		4	1	117874082	678
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000172828	nonsense_mediated_decay		9	-1	88482149	1925
ENSMUSG00000101714	lincRNA	Gm28415	ENSMUST00000187528	lincRNA		1	1	35806974	452
ENSMUSG00000042208	protein_coding	0610010F05Rik	ENSMUST00000155903	nonsense_mediated_decay		11	-1	23633549	2569
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000173801	protein_coding	alternative1	9	-1	88482555	2944
ENSMUSG00000042208	protein_coding	0610010F05Rik	ENSMUST00000043356	protein_coding	principal2	11	-1	23629027	4392
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000174361	protein_coding		9	-1	88480753	1767
ENSMUSG00000107285	unprocessed_pseudogene	Gm3176	ENSMUST00000200920	unprocessed_pseudogene		5	-1	94954134	1249
ENSMUSG00000042208	protein_coding	0610010F05Rik	ENSMUST00000093267	protein_coding	alternative2	11	-1	23629027	3646
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000174145	retained_intron		9	-1	88480744	549
ENSMUSG00000042208	protein_coding	0610010F05Rik	ENSMUST00000123909	protein_coding		11	-1	23595409	739
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000173405	protein_coding		9	-1	88481169	766
ENSMUSG00000102531	lincRNA	1110002O04Rik	ENSMUST00000194261	lincRNA		1	1	35879845	566
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000187770	retained_intron		9	-1	88481224	2387
ENSMUSG00000042208	protein_coding	0610010F05Rik	ENSMUST00000141353	protein_coding		11	-1	23633631	1279
ENSMUSG00000059741	protein_coding	Myl3	ENSMUST00000200011	protein_coding		9	1	110741861	737
ENSMUSG00000032423	protein_coding	Syncrip	ENSMUST00000172508	protein_coding		9	-1	88482574	473
ENSMUSG00000103096	processed_pseudogene	Gm8022	ENSMUST00000191763	processed_pseudogene		1	1	35958919	904
ENSMUSG00000042208	protein_coding	0610010F05Rik	ENSMUST00000131612	protein_coding		11	-1	23633631	523
ENSMUSG00000102279	lincRNA	Gm37146	ENSMUST00000192572	lincRNA		1	-1	35986373	463
ENSMUSG00000101335	sense_intronic	Gm28229	ENSMUST00000188747	sense_intronic		9	-1	88443652	2153
ENSMUSG00000042208	protein_coding	0610010F05Rik	ENSMUST00000180260	protein_coding	principal2	11	-1	23633631	4128
ENSMUSG00000042208	protein_coding	0610010F05Rik	ENSMUST00000109532	protein_coding	principal2	11	-1	23633639	4106
ENSMUSG00000073510	unprocessed_pseudogene	Gm7647	ENSMUST00000200996	unprocessed_pseudogene		5	1	94963018	1389
ENSMUSG00000059741	protein_coding	Myl3	ENSMUST00000079784	protein_coding	principal2	9	1	110763646	937
ENSMUSG00000103708	lincRNA	Gm33222	ENSMUST00000193725	lincRNA		1	-1	36011044	654
ENSMUSG00000103708	lincRNA	Gm33222	ENSMUST00000194823	lincRNA		1	-1	36010990	511
ENSMUSG00000059741	protein_coding	Myl3	ENSMUST00000124267	protein_coding	alternative2	9	1	110765861	575
ENSMUSG00000022893	protein_coding	Adamts1	ENSMUST00000023610	protein_coding	principal1	16	-1	85803113	4884
ENSMUSG00000059741	protein_coding	Myl3	ENSMUST00000136695	protein_coding	alternative2	9	1	110766156	614
ENSMUSG00000022893	protein_coding	Adamts1	ENSMUST00000125897	protein_coding		16	-1	85801481	2338
ENSMUSG00000096742	protein_coding	Gm6367	ENSMUST00000178646	protein_coding	principal1	5	1	94988626	2464
ENSMUSG00000059741	protein_coding	Myl3	ENSMUST00000153142	retained_intron		9	1	110768435	1125
ENSMUSG00000022893	protein_coding	Adamts1	ENSMUST00000138474	retained_intron		16	-1	85799638	737
ENSMUSG00000104201	lincRNA	4930535G08Rik	ENSMUST00000192017	lincRNA		1	1	36011072	425
ENSMUSG00000028460	protein_coding	Sit1	ENSMUST00000030180	protein_coding	principal1	4	-1	43483734	1228
ENSMUSG00000102434	TEC	Gm38049	ENSMUST00000195698	TEC		1	-1	36031018	1372
ENSMUSG00000028460	protein_coding	Sit1	ENSMUST00000123526	processed_transcript		4	-1	43483222	820
ENSMUSG00000107376	unprocessed_pseudogene	Gm42661	ENSMUST00000202364	unprocessed_pseudogene		5	1	95063576	1442
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000086932	protein_coding	alternative2	17	1	47737030	2342
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000126258	protein_coding		17	1	47737600	287
ENSMUSG00000045216	protein_coding	Hs6st1	ENSMUST00000088174	protein_coding	principal1	1	1	36068400	3719
ENSMUSG00000045216	protein_coding	Hs6st1	ENSMUST00000194670	retained_intron		1	1	36101690	3291
ENSMUSG00000104523	antisense	Gm37335	ENSMUST00000192656	antisense		1	-1	36106446	447
ENSMUSG00000018378	protein_coding	Cuedc1	ENSMUST00000018522	protein_coding	principal1	11	1	88099146	3180
ENSMUSG00000052508	protein_coding	Olfr536	ENSMUST00000215768	protein_coding	principal1	7	-1	140507396	4231
ENSMUSG00000040564	protein_coding	Apoc1	ENSMUST00000108451	protein_coding	principal1	7	-1	19692638	532
ENSMUSG00000018378	protein_coding	Cuedc1	ENSMUST00000133149	retained_intron		11	1	88099290	1844
ENSMUSG00000052508	protein_coding	Olfr536	ENSMUST00000215340	protein_coding	principal1	7	-1	140507396	3938
ENSMUSG00000018378	protein_coding	Cuedc1	ENSMUST00000154812	nonsense_mediated_decay		11	1	88162261	3163
ENSMUSG00000040564	protein_coding	Apoc1	ENSMUST00000045035	protein_coding	principal1	7	-1	19692660	432
ENSMUSG00000018378	protein_coding	Cuedc1	ENSMUST00000132377	retained_intron		11	1	88182303	347
ENSMUSG00000052508	protein_coding	Olfr536	ENSMUST00000064392	protein_coding	principal1	7	-1	140507318	3853
ENSMUSG00000040564	protein_coding	Apoc1	ENSMUST00000207978	protein_coding		7	-1	19692604	339
ENSMUSG00000018378	protein_coding	Cuedc1	ENSMUST00000142564	processed_transcript		11	1	88186009	325
ENSMUSG00000040564	protein_coding	Apoc1	ENSMUST00000207500	retained_intron		7	-1	19692491	271
ENSMUSG00000032492	protein_coding	Pth1r	ENSMUST00000198865	protein_coding	principal1	9	-1	110747122	2201
ENSMUSG00000018378	protein_coding	Cuedc1	ENSMUST00000125297	retained_intron		11	1	88187821	805
ENSMUSG00000052508	protein_coding	Olfr536	ENSMUST00000209873	protein_coding		7	-1	140507311	581
ENSMUSG00000052508	protein_coding	Olfr536	ENSMUST00000211326	processed_transcript		7	-1	140507293	264
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000113288	protein_coding	alternative2	17	1	47737928	2328
ENSMUSG00000032492	protein_coding	Pth1r	ENSMUST00000006005	protein_coding	principal1	9	-1	110742719	2307
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000113284	protein_coding		17	1	47738903	1974
ENSMUSG00000032492	protein_coding	Pth1r	ENSMUST00000199862	protein_coding		9	-1	110747056	682
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000137845	protein_coding		17	1	47754326	327
ENSMUSG00000032492	protein_coding	Pth1r	ENSMUST00000196057	protein_coding		9	-1	110743648	830
ENSMUSG00000032492	protein_coding	Pth1r	ENSMUST00000199791	protein_coding		9	-1	110747145	508
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000125177	protein_coding		17	1	47759175	564
ENSMUSG00000104082	unprocessed_pseudogene	Gm7115	ENSMUST00000193706	unprocessed_pseudogene		3	1	83799968	948
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000130208	protein_coding		17	1	47763170	349
ENSMUSG00000032492	protein_coding	Pth1r	ENSMUST00000166716	protein_coding	principal1	9	-1	110743686	2219
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000160373	protein_coding		17	1	47769238	371
ENSMUSG00000116586	lincRNA	4930556C24Rik	ENSMUST00000231357	lincRNA		16	1	85819211	904
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000159641	protein_coding		17	1	47769238	538
ENSMUSG00000115420	lincRNA	Rmrp	ENSMUST00000226420	lincRNA		4	-1	43493063	281
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000141631	protein_coding		17	1	47782875	435
ENSMUSG00000028461	protein_coding	Ccdc107	ENSMUST00000143073	processed_transcript		4	1	43492900	594
ENSMUSG00000110092	polymorphic_pseudogene	Olfr537-ps1	ENSMUST00000209871	polymorphic_pseudogene	principal1	7	1	140529534	2792
ENSMUSG00000110092	polymorphic_pseudogene	Olfr537-ps1	ENSMUST00000210949	polymorphic_pseudogene	principal1	7	1	140529559	2821
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000024786	protein_coding	principal3	17	1	47785720	2296
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000146782	protein_coding		17	1	47786155	1607
ENSMUSG00000044664	protein_coding	Prss42	ENSMUST00000035715	protein_coding	principal1	9	1	110798166	1584
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000124765	processed_transcript		17	1	47787568	439
ENSMUSG00000117116	processed_pseudogene	Gm49868	ENSMUST00000233293	processed_pseudogene		17	-1	28947195	625
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000162719	retained_intron		17	1	47787910	324
ENSMUSG00000023990	protein_coding	Tfeb	ENSMUST00000140715	retained_intron		17	1	47789441	647
ENSMUSG00000032493	protein_coding	Prss44	ENSMUST00000098345	protein_coding	principal1	9	1	110813994	1838
ENSMUSG00000032493	protein_coding	Prss44	ENSMUST00000141089	nonsense_mediated_decay		9	1	110814027	1201
ENSMUSG00000032493	protein_coding	Prss44	ENSMUST00000198815	processed_transcript		9	1	110814451	679
ENSMUSG00000028461	protein_coding	Ccdc107	ENSMUST00000030181	protein_coding	principal2	4	1	43493362	817
ENSMUSG00000032493	protein_coding	Prss44	ENSMUST00000196597	retained_intron		9	1	110815217	1732
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000144429	nonsense_mediated_decay		X	-1	74246398	8233
ENSMUSG00000028461	protein_coding	Ccdc107	ENSMUST00000127324	processed_transcript		4	1	43493377	363
ENSMUSG00000028461	protein_coding	Ccdc107	ENSMUST00000107922	protein_coding	alternative2	4	1	43493389	865
ENSMUSG00000028461	protein_coding	Ccdc107	ENSMUST00000140005	processed_transcript		4	1	43493417	942
ENSMUSG00000028461	protein_coding	Ccdc107	ENSMUST00000137113	processed_transcript		4	1	43493417	863
ENSMUSG00000000876	protein_coding	Pxmp4	ENSMUST00000000896	protein_coding	principal1	2	-1	154603708	2789
ENSMUSG00000000876	protein_coding	Pxmp4	ENSMUST00000109703	protein_coding		2	-1	154603688	560
ENSMUSG00000018160	protein_coding	Med1	ENSMUST00000092735	protein_coding	alternative2	11	-1	98193260	2627
ENSMUSG00000058398	protein_coding	Prss43	ENSMUST00000077549	protein_coding	principal1	9	1	110826690	2327
ENSMUSG00000109812	TEC	Gm45640	ENSMUST00000210665	TEC		8	1	90876581	1896
ENSMUSG00000074171	TEC	Gm6658	ENSMUST00000209493	TEC		8	-1	90908416	1885
ENSMUSG00000074171	TEC	Gm6658	ENSMUST00000098517	TEC		8	-1	90908415	477
ENSMUSG00000110166	antisense	Gm45641	ENSMUST00000209775	antisense		8	-1	90849846	452
ENSMUSG00000109863	TEC	Gm45643	ENSMUST00000211364	TEC		8	1	90893155	1484
ENSMUSG00000018160	protein_coding	Med1	ENSMUST00000107545	protein_coding	alternative2	11	-1	98193293	8024
ENSMUSG00000018160	protein_coding	Med1	ENSMUST00000126483	processed_transcript		11	-1	98163957	616
ENSMUSG00000025400	protein_coding	Tac2	ENSMUST00000179960	protein_coding	principal1	10	1	127724478	852
ENSMUSG00000025400	protein_coding	Tac2	ENSMUST00000026466	protein_coding	principal1	10	1	127725395	678
ENSMUSG00000018160	protein_coding	Med1	ENSMUST00000018304	protein_coding	principal3	11	-1	98192955	5845
ENSMUSG00000032123	protein_coding	Dpagt1	ENSMUST00000215248	nonsense_mediated_decay		9	1	44326019	658
ENSMUSG00000025400	protein_coding	Tac2	ENSMUST00000217729	retained_intron		10	1	127725404	358
ENSMUSG00000025400	protein_coding	Tac2	ENSMUST00000218048	retained_intron		10	1	127727847	514
ENSMUSG00000018160	protein_coding	Med1	ENSMUST00000147933	processed_transcript		11	-1	98161022	609
ENSMUSG00000032123	protein_coding	Dpagt1	ENSMUST00000216327	retained_intron		9	1	44326551	1886
ENSMUSG00000018160	protein_coding	Med1	ENSMUST00000135479	processed_transcript		11	-1	98179996	389
ENSMUSG00000018160	protein_coding	Med1	ENSMUST00000129557	processed_transcript		11	-1	98193276	1372
ENSMUSG00000095901	protein_coding	Olfr538	ENSMUST00000210973	protein_coding	principal1	7	1	140567886	1920
ENSMUSG00000032123	protein_coding	Dpagt1	ENSMUST00000213461	processed_transcript		9	1	44326564	997
ENSMUSG00000085897	processed_pseudogene	Gm11604	ENSMUST00000121487	processed_pseudogene		11	1	98185366	742
ENSMUSG00000095901	protein_coding	Olfr538	ENSMUST00000084457	protein_coding	principal1	7	1	140574155	933
ENSMUSG00000047257	protein_coding	Prss45	ENSMUST00000011391	protein_coding	principal2	9	1	110834588	1232
ENSMUSG00000047257	protein_coding	Prss45	ENSMUST00000146794	protein_coding	alternative2	9	1	110834588	1208
ENSMUSG00000027995	protein_coding	Tlr2	ENSMUST00000029623	protein_coding	principal1	3	-1	83841767	3014
ENSMUSG00000032123	protein_coding	Dpagt1	ENSMUST00000054708	protein_coding	principal1	9	1	44326845	2205
ENSMUSG00000049719	protein_coding	Prss46	ENSMUST00000176403	protein_coding	principal1	9	1	110844506	1257
ENSMUSG00000032123	protein_coding	Dpagt1	ENSMUST00000215050	nonsense_mediated_decay		9	1	44326873	2050
ENSMUSG00000032123	protein_coding	Dpagt1	ENSMUST00000217225	processed_transcript		9	1	44327983	447
ENSMUSG00000049719	protein_coding	Prss46	ENSMUST00000119427	retained_intron		9	1	110849538	1211
ENSMUSG00000110740	antisense	Gm48853	ENSMUST00000213709	antisense		9	-1	44334386	217
ENSMUSG00000086181	antisense	C230034O21Rik	ENSMUST00000153659	antisense		3	-1	38888259	2836
ENSMUSG00000048752	protein_coding	Prss50	ENSMUST00000051097	protein_coding	principal1	9	1	110857967	1456
ENSMUSG00000048752	protein_coding	Prss50	ENSMUST00000196027	protein_coding		9	1	110861366	689
ENSMUSG00000046743	protein_coding	Fat4	ENSMUST00000061260	protein_coding	principal1	3	1	38886940	16109
ENSMUSG00000032422	protein_coding	Snx14	ENSMUST00000165315	protein_coding		9	-1	88438951	3109
ENSMUSG00000046743	protein_coding	Fat4	ENSMUST00000129182	retained_intron		3	1	38890942	2994
ENSMUSG00000020280	protein_coding	Pus10	ENSMUST00000109525	protein_coding	principal1	11	1	23665674	3177
ENSMUSG00000105910	antisense	Gm43539	ENSMUST00000196190	antisense		3	-1	39009681	363
ENSMUSG00000032422	protein_coding	Snx14	ENSMUST00000140439	retained_intron		9	-1	88398621	1765
ENSMUSG00000032422	protein_coding	Snx14	ENSMUST00000173011	protein_coding		9	-1	88438898	2238
ENSMUSG00000020280	protein_coding	Pus10	ENSMUST00000020520	protein_coding	principal1	11	1	23665697	1813
ENSMUSG00000032422	protein_coding	Snx14	ENSMUST00000173039	protein_coding		9	-1	88438958	2970
ENSMUSG00000007021	protein_coding	Syngr3	ENSMUST00000130936	processed_transcript		17	-1	24688199	1836
ENSMUSG00000020280	protein_coding	Pus10	ENSMUST00000058163	protein_coding	principal1	11	1	23666007	3559
ENSMUSG00000032422	protein_coding	Snx14	ENSMUST00000174806	protein_coding	principal1	9	-1	88438914	3082
ENSMUSG00000020280	protein_coding	Pus10	ENSMUST00000136365	retained_intron		11	1	23666188	1281
ENSMUSG00000020280	protein_coding	Pus10	ENSMUST00000143117	protein_coding		11	1	23666511	469
ENSMUSG00000032422	protein_coding	Snx14	ENSMUST00000126405	nonsense_mediated_decay		9	-1	88438929	2633
ENSMUSG00000007021	protein_coding	Syngr3	ENSMUST00000007236	protein_coding	principal1	17	-1	24689955	1965
ENSMUSG00000032422	protein_coding	Snx14	ENSMUST00000187610	retained_intron		9	-1	88394474	2269
ENSMUSG00000020280	protein_coding	Pus10	ENSMUST00000139646	retained_intron		11	1	23717482	628
ENSMUSG00000032422	protein_coding	Snx14	ENSMUST00000126563	retained_intron		9	-1	88438912	1075
ENSMUSG00000020280	protein_coding	Pus10	ENSMUST00000142287	retained_intron		11	1	23718556	592
ENSMUSG00000032422	protein_coding	Snx14	ENSMUST00000239462	protein_coding		9	-1	88438951	3112
ENSMUSG00000066443	processed_pseudogene	Gm10163	ENSMUST00000155008	processed_pseudogene		9	1	88390837	481
ENSMUSG00000031343	protein_coding	Gabra3	ENSMUST00000055966	protein_coding	principal1	X	-1	72656186	3662
ENSMUSG00000020283	protein_coding	Pex13	ENSMUST00000020523	protein_coding	principal1	11	-1	23665959	4146
ENSMUSG00000092541	protein_coding	Gm20537	ENSMUST00000173131	nonsense_mediated_decay	principal5	9	-1	88456616	889
ENSMUSG00000031343	protein_coding	Gabra3	ENSMUST00000114554	protein_coding		X	-1	72656848	1790
ENSMUSG00000020283	protein_coding	Pex13	ENSMUST00000130811	nonsense_mediated_decay		11	-1	23665852	367
ENSMUSG00000092541	protein_coding	Gm20537	ENSMUST00000154586	nonsense_mediated_decay	alternative2	9	-1	88456501	547
ENSMUSG00000031343	protein_coding	Gabra3	ENSMUST00000137517	processed_transcript		X	-1	72656246	589
ENSMUSG00000020283	protein_coding	Pex13	ENSMUST00000124839	processed_transcript		11	-1	23665842	592
ENSMUSG00000020283	protein_coding	Pex13	ENSMUST00000146533	processed_transcript		11	-1	23665673	345
ENSMUSG00000081471	processed_pseudogene	Gm14735	ENSMUST00000121772	processed_pseudogene		X	1	72467302	3088
ENSMUSG00000048077	protein_coding	H1f7	ENSMUST00000060855	protein_coding	principal1	15	-1	98257293	1308
ENSMUSG00000044037	protein_coding	Als2cl	ENSMUST00000143416	processed_transcript		9	1	110879870	485
ENSMUSG00000097602	antisense	4930519P11Rik	ENSMUST00000238256	antisense		2	-1	154613437	1628
ENSMUSG00000097602	antisense	4930519P11Rik	ENSMUST00000181369	antisense		2	-1	154613437	501
ENSMUSG00000022987	protein_coding	Zfp641	ENSMUST00000169721	protein_coding	principal2	15	-1	98296161	4288
ENSMUSG00000022987	protein_coding	Zfp641	ENSMUST00000023722	protein_coding	alternative2	15	-1	98296130	4212
ENSMUSG00000062037	protein_coding	Olfr285	ENSMUST00000216901	protein_coding	principal1	15	-1	98317353	5330
ENSMUSG00000062037	protein_coding	Olfr285	ENSMUST00000079736	protein_coding	principal1	15	-1	98313548	960
ENSMUSG00000059842	protein_coding	Zfp341	ENSMUST00000081926	protein_coding	principal2	2	1	154613297	3299
ENSMUSG00000051793	protein_coding	Olfr284	ENSMUST00000206647	protein_coding		15	-1	98340987	966
ENSMUSG00000051793	protein_coding	Olfr284	ENSMUST00000063289	protein_coding	principal1	15	-1	98340939	918
ENSMUSG00000059842	protein_coding	Zfp341	ENSMUST00000126421	nonsense_mediated_decay		2	1	154613356	3000
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000114299	protein_coding	principal2	X	-1	74249820	8456
ENSMUSG00000059842	protein_coding	Zfp341	ENSMUST00000109702	protein_coding	alternative2	2	1	154613370	3162
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000033699	protein_coding	alternative1	X	-1	74246555	8312
ENSMUSG00000085483	antisense	Gm14198	ENSMUST00000153208	antisense		2	-1	154632636	948
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000153462	protein_coding		17	1	28951950	733
ENSMUSG00000056184	protein_coding	Olfr283	ENSMUST00000215830	protein_coding	principal1	15	-1	98380946	2392
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000130007	protein_coding		X	-1	74246364	7753
ENSMUSG00000082657	processed_pseudogene	Gm14736	ENSMUST00000121470	processed_pseudogene		X	-1	72692845	336
ENSMUSG00000056184	protein_coding	Olfr283	ENSMUST00000057386	protein_coding	principal1	15	-1	98379197	1102
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000156766	processed_transcript		X	-1	74226479	738
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000141528	retained_intron		X	-1	74226789	1106
ENSMUSG00000116514	processed_pseudogene	Gm49443	ENSMUST00000230662	processed_pseudogene		15	1	98384007	261
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000124950	retained_intron		X	-1	74227620	797
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000150554	protein_coding		X	-1	74228489	832
ENSMUSG00000049932	protein_coding	H2ax	ENSMUST00000052686	protein_coding	principal1	9	1	44334694	1384
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000133609	retained_intron		X	-1	74227968	638
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000127924	nonsense_mediated_decay		X	-1	74229063	704
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000133174	retained_intron		X	-1	74228799	632
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000127463	protein_coding		X	-1	74230570	841
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000130203	processed_transcript		X	-1	74235962	689
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000133288	processed_transcript		X	-1	74237925	558
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000239316	nonsense_mediated_decay		X	-1	74241303	396
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000233145	nonsense_mediated_decay		17	1	28952258	1534
ENSMUSG00000031328	protein_coding	Flna	ENSMUST00000101454	protein_coding	principal2	X	-1	74246534	8345
ENSMUSG00000106059	processed_pseudogene	Gm9364	ENSMUST00000199220	processed_pseudogene		3	1	122861913	460
ENSMUSG00000044037	protein_coding	Als2cl	ENSMUST00000084926	protein_coding	principal1	9	1	110880174	5079
ENSMUSG00000044037	protein_coding	Als2cl	ENSMUST00000130386	protein_coding	principal1	9	1	110880206	5056
ENSMUSG00000044037	protein_coding	Als2cl	ENSMUST00000123389	protein_coding		9	1	110880233	478
ENSMUSG00000044037	protein_coding	Als2cl	ENSMUST00000155014	protein_coding	principal1	9	1	110880337	5150
ENSMUSG00000044037	protein_coding	Als2cl	ENSMUST00000200613	retained_intron		9	1	110885748	364
ENSMUSG00000031344	protein_coding	Gabrq	ENSMUST00000114553	protein_coding	alternative2	X	1	72825178	4943
ENSMUSG00000044037	protein_coding	Als2cl	ENSMUST00000141845	retained_intron		9	1	110886289	824
ENSMUSG00000031344	protein_coding	Gabrq	ENSMUST00000033711	protein_coding	principal3	X	1	72825436	2000
ENSMUSG00000044037	protein_coding	Als2cl	ENSMUST00000156673	processed_transcript		9	1	110887995	4122
ENSMUSG00000105140	TEC	Gm43127	ENSMUST00000195890	TEC		9	-1	110895899	2789
ENSMUSG00000070305	protein_coding	Mpzl3	ENSMUST00000114664	protein_coding	principal1	9	1	45055186	3424
ENSMUSG00000032386	protein_coding	Trip4	ENSMUST00000122410	protein_coding		9	-1	65885055	3915
ENSMUSG00000049555	protein_coding	Tmie	ENSMUST00000050958	protein_coding	principal1	9	-1	110880113	2802
ENSMUSG00000049555	protein_coding	Tmie	ENSMUST00000198062	processed_transcript		9	-1	110879305	358
ENSMUSG00000049555	protein_coding	Tmie	ENSMUST00000199189	retained_intron		9	-1	110876021	456
ENSMUSG00000070305	protein_coding	Mpzl3	ENSMUST00000093856	retained_intron		9	1	45055188	3260
ENSMUSG00000005034	protein_coding	Prkacb	ENSMUST00000102515	protein_coding	principal1	3	-1	146812960	4347
ENSMUSG00000070305	protein_coding	Mpzl3	ENSMUST00000114663	nonsense_mediated_decay		9	1	45055209	509
ENSMUSG00000070305	protein_coding	Mpzl3	ENSMUST00000187113	retained_intron		9	1	45059249	3679
ENSMUSG00000070305	protein_coding	Mpzl3	ENSMUST00000186268	retained_intron		9	1	45070605	522
ENSMUSG00000032386	protein_coding	Trip4	ENSMUST00000119245	protein_coding	principal1	9	-1	65908676	4211
ENSMUSG00000032386	protein_coding	Trip4	ENSMUST00000117083	protein_coding	principal1	9	-1	65885056	1999
ENSMUSG00000032092	protein_coding	Mpzl2	ENSMUST00000217097	protein_coding		9	1	45039799	1175
ENSMUSG00000032092	protein_coding	Mpzl2	ENSMUST00000215886	processed_transcript		9	1	45039802	873
ENSMUSG00000032386	protein_coding	Trip4	ENSMUST00000132380	retained_intron		9	-1	65853213	508
ENSMUSG00000096393	protein_coding	Fam240a	ENSMUST00000177678	protein_coding	principal1	9	-1	110916861	499
ENSMUSG00000032386	protein_coding	Trip4	ENSMUST00000134338	protein_coding		9	-1	65908786	661
ENSMUSG00000032386	protein_coding	Trip4	ENSMUST00000133747	processed_transcript		9	-1	65908719	1564
ENSMUSG00000032386	protein_coding	Trip4	ENSMUST00000126517	processed_transcript		9	-1	65908786	907
ENSMUSG00000032092	protein_coding	Mpzl2	ENSMUST00000215292	protein_coding		9	1	45040177	1095
ENSMUSG00000032386	protein_coding	Trip4	ENSMUST00000143864	processed_transcript		9	-1	65908794	683
ENSMUSG00000032386	protein_coding	Trip4	ENSMUST00000139346	retained_intron		9	-1	65908786	576
ENSMUSG00000032386	protein_coding	Trip4	ENSMUST00000179395	protein_coding		9	-1	65908794	7055
ENSMUSG00000005034	protein_coding	Prkacb	ENSMUST00000106137	protein_coding		3	-1	146770261	4061
ENSMUSG00000079915	processed_pseudogene	Gm16073	ENSMUST00000116032	processed_pseudogene		9	1	65838167	517
ENSMUSG00000002900	protein_coding	Lamb1	ENSMUST00000169088	protein_coding	principal1	12	1	31265234	5557
ENSMUSG00000005034	protein_coding	Prkacb	ENSMUST00000106138	protein_coding		3	-1	146770781	3999
ENSMUSG00000002900	protein_coding	Lamb1	ENSMUST00000002979	protein_coding	principal1	12	1	31265293	5784
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000233197	protein_coding	principal1	17	1	28952258	4196
ENSMUSG00000032092	protein_coding	Mpzl2	ENSMUST00000034600	protein_coding	principal1	9	1	45042425	3107
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000118762	protein_coding		17	1	28952422	3853
ENSMUSG00000032092	protein_coding	Mpzl2	ENSMUST00000216777	retained_intron		9	1	45042696	3574
ENSMUSG00000002900	protein_coding	Lamb1	ENSMUST00000164228	retained_intron		12	1	31265294	2478
ENSMUSG00000040204	protein_coding	Pclaf	ENSMUST00000045802	protein_coding	principal1	9	1	65890237	2188
ENSMUSG00000002900	protein_coding	Lamb1	ENSMUST00000170495	protein_coding		12	1	31265297	386
ENSMUSG00000110899	TEC	Gm48840	ENSMUST00000214803	TEC		9	-1	45055344	3921
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000232729	nonsense_mediated_decay		17	1	28952452	456
ENSMUSG00000005034	protein_coding	Prkacb	ENSMUST00000005164	protein_coding		3	-1	146781416	4001
ENSMUSG00000040204	protein_coding	Pclaf	ENSMUST00000130308	retained_intron		9	1	65890320	682
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000233847	nonsense_mediated_decay		17	1	28952460	1385
ENSMUSG00000040204	protein_coding	Pclaf	ENSMUST00000153841	retained_intron		9	1	65890362	2530
ENSMUSG00000005034	protein_coding	Prkacb	ENSMUST00000144369	retained_intron		3	-1	146745627	919
ENSMUSG00000032494	protein_coding	Tdgf1	ENSMUST00000035075	protein_coding	principal1	9	-1	110946158	1932
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000122163	nonsense_mediated_decay		17	1	28952465	2534
ENSMUSG00000005034	protein_coding	Prkacb	ENSMUST00000199722	protein_coding		3	-1	146764570	493
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000057174	protein_coding		17	1	28952469	1861
ENSMUSG00000081942	processed_pseudogene	Gm15149	ENSMUST00000119370	processed_pseudogene		X	1	151156607	360
ENSMUSG00000002900	protein_coding	Lamb1	ENSMUST00000169065	retained_intron		12	1	31276656	2680
ENSMUSG00000032494	protein_coding	Tdgf1	ENSMUST00000197460	nonsense_mediated_decay		9	-1	110946094	1290
ENSMUSG00000005034	protein_coding	Prkacb	ENSMUST00000197616	protein_coding		3	-1	146788836	569
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000232874	protein_coding		17	1	28952471	3530
ENSMUSG00000002900	protein_coding	Lamb1	ENSMUST00000164009	retained_intron		12	1	31278175	680
ENSMUSG00000032494	protein_coding	Tdgf1	ENSMUST00000199782	protein_coding		9	-1	110946075	502
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000232772	protein_coding		17	1	28952480	3345
ENSMUSG00000002900	protein_coding	Lamb1	ENSMUST00000172134	retained_intron		12	1	31323521	424
ENSMUSG00000005034	protein_coding	Prkacb	ENSMUST00000196344	retained_intron		3	-1	146812990	3473
ENSMUSG00000032494	protein_coding	Tdgf1	ENSMUST00000199196	protein_coding		9	-1	110944871	786
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000233334	protein_coding		17	1	28952487	1524
ENSMUSG00000115443	processed_pseudogene	Gm9395	ENSMUST00000228932	processed_pseudogene		14	1	121831014	445
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000150858	protein_coding		17	1	28952503	938
ENSMUSG00000002900	protein_coding	Lamb1	ENSMUST00000239496	protein_coding		12	1	31265294	5778
ENSMUSG00000081625	processed_pseudogene	Rps12-ps7	ENSMUST00000117169	processed_pseudogene		X	1	151165725	385
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000233064	protein_coding		17	1	28952599	462
ENSMUSG00000106707	TEC	Gm43748	ENSMUST00000202329	TEC		6	1	34859705	1233
ENSMUSG00000086286	lincRNA	Gm15138	ENSMUST00000151778	lincRNA		X	1	151169700	379
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000117672	protein_coding		17	1	28952681	2162
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000232980	retained_intron		17	1	28952686	3301
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000153831	protein_coding		17	1	28952714	1541
ENSMUSG00000023057	protein_coding	Fabp2	ENSMUST00000023820	protein_coding	principal1	3	1	122895072	965
ENSMUSG00000005936	protein_coding	Kctd20	ENSMUST00000168507	protein_coding	principal1	17	1	28953216	2400
ENSMUSG00000117080	bidirectional_promoter_lncRNA	1700063J08Rik	ENSMUST00000233094	bidirectional_promoter_lncRNA		17	-1	28952408	554
ENSMUSG00000032495	protein_coding	Lrrc2	ENSMUST00000035076	protein_coding	principal1	9	1	110951545	3657
ENSMUSG00000097852	antisense	4933405D12Rik	ENSMUST00000180557	antisense		3	-1	122924116	1383
ENSMUSG00000097852	antisense	4933405D12Rik	ENSMUST00000199131	antisense		3	-1	122924116	768
ENSMUSG00000032495	protein_coding	Lrrc2	ENSMUST00000196834	protein_coding		9	1	110953799	666
ENSMUSG00000032495	protein_coding	Lrrc2	ENSMUST00000196598	nonsense_mediated_decay		9	1	110960834	520
ENSMUSG00000093942	protein_coding	Olfr46	ENSMUST00000214180	protein_coding	alternative2	7	1	140601269	7750
ENSMUSG00000106234	TEC	Gm43535	ENSMUST00000197846	TEC		9	1	110974432	164
ENSMUSG00000093942	protein_coding	Olfr46	ENSMUST00000211771	protein_coding	alternative2	7	1	140601340	1190
ENSMUSG00000062591	protein_coding	Tubb4a	ENSMUST00000071135	protein_coding	principal1	17	-1	57087782	2228
ENSMUSG00000093942	protein_coding	Olfr46	ENSMUST00000072655	protein_coding	principal2	7	1	140610168	957
ENSMUSG00000042351	protein_coding	Grap2	ENSMUST00000229980	protein_coding	principal1	15	1	80572594	1294
ENSMUSG00000042351	protein_coding	Grap2	ENSMUST00000230856	nonsense_mediated_decay		15	1	80572594	1556
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000048665	protein_coding	principal3	8	1	90828352	12008
ENSMUSG00000054091	protein_coding	1810037I17Rik	ENSMUST00000106429	protein_coding	principal1	3	1	122924203	1160
ENSMUSG00000042351	protein_coding	Grap2	ENSMUST00000043149	protein_coding	principal1	15	1	80623483	5475
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000209474	processed_transcript		8	1	90828827	759
ENSMUSG00000041765	protein_coding	Ubac2	ENSMUST00000039803	protein_coding	principal1	14	1	121878620	2139
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000211034	processed_transcript		8	1	90828833	799
ENSMUSG00000042351	protein_coding	Grap2	ENSMUST00000230573	nonsense_mediated_decay		15	1	80623512	540
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000211215	processed_transcript		8	1	90828836	728
ENSMUSG00000066319	protein_coding	Rtp3	ENSMUST00000199891	protein_coding	principal1	9	-1	110989713	2463
ENSMUSG00000042351	protein_coding	Grap2	ENSMUST00000230910	processed_transcript		15	1	80623522	679
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000209531	retained_intron		8	1	90828856	607
ENSMUSG00000041765	protein_coding	Ubac2	ENSMUST00000226998	nonsense_mediated_decay		14	1	121878662	599
ENSMUSG00000116433	TEC	Gm49553	ENSMUST00000230939	TEC		15	1	80640458	1951
ENSMUSG00000066319	protein_coding	Rtp3	ENSMUST00000198702	protein_coding		9	-1	110990583	703
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000211795	processed_transcript		8	1	90849667	407
ENSMUSG00000022894	protein_coding	Adamts5	ENSMUST00000023611	protein_coding	principal1	16	-1	85901828	10791
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000211403	protein_coding		8	1	90908614	2279
ENSMUSG00000041765	protein_coding	Ubac2	ENSMUST00000227684	processed_transcript		14	1	121916203	526
ENSMUSG00000066319	protein_coding	Rtp3	ENSMUST00000084922	protein_coding	principal1	9	-1	110989611	1425
ENSMUSG00000041765	protein_coding	Ubac2	ENSMUST00000227936	processed_transcript		14	1	121946314	688
ENSMUSG00000036813	protein_coding	Entpd8	ENSMUST00000135004	retained_intron		2	1	25080304	558
ENSMUSG00000057802	processed_transcript	Gm10030	ENSMUST00000197321	antisense		9	1	110989499	3824
ENSMUSG00000051212	protein_coding	Gpr183	ENSMUST00000049872	protein_coding	principal1	14	-1	121965195	2724
ENSMUSG00000057802	processed_transcript	Gm10030	ENSMUST00000197279	retained_intron		9	1	111000374	843
ENSMUSG00000057802	processed_transcript	Gm10030	ENSMUST00000080872	processed_transcript		9	1	111004811	306
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000209203	nonsense_mediated_decay		8	1	90932344	9213
ENSMUSG00000051212	protein_coding	Gpr183	ENSMUST00000227267	protein_coding		14	-1	121965105	361
ENSMUSG00000102060	antisense	1700061E17Rik	ENSMUST00000185439	antisense		9	1	110986201	1067
ENSMUSG00000079414	lincRNA	Gm11110	ENSMUST00000233454	lincRNA		17	-1	57105922	1560
ENSMUSG00000058396	protein_coding	Gpr182	ENSMUST00000079692	protein_coding	principal1	10	-1	127751732	3954
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000209423	protein_coding	alternative2	8	1	90932344	9419
ENSMUSG00000050350	protein_coding	Gpr18	ENSMUST00000055475	protein_coding	principal1	14	-1	121915781	1498
ENSMUSG00000079414	lincRNA	Gm11110	ENSMUST00000233039	lincRNA		17	-1	57105942	1014
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000210947	protein_coding		8	1	90954958	2964
ENSMUSG00000079414	lincRNA	Gm11110	ENSMUST00000232813	lincRNA		17	-1	57105612	735
ENSMUSG00000102112	antisense	1810041H14Rik	ENSMUST00000187218	antisense		14	-1	121878270	434
ENSMUSG00000044617	protein_coding	Zbtb39	ENSMUST00000054287	protein_coding	principal1	10	1	127739538	5960
ENSMUSG00000079414	lincRNA	Gm11110	ENSMUST00000233806	lincRNA		17	-1	57105533	736
ENSMUSG00000102112	antisense	1810041H14Rik	ENSMUST00000187773	antisense		14	-1	121878504	416
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000209746	protein_coding		8	1	90955270	259
ENSMUSG00000079414	lincRNA	Gm11110	ENSMUST00000112915	lincRNA		17	-1	57105942	1013
ENSMUSG00000102112	antisense	1810041H14Rik	ENSMUST00000185880	antisense		14	-1	121879409	355
ENSMUSG00000104662	TEC	Gm43267	ENSMUST00000199664	TEC		5	1	144223725	1796
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000209341	retained_intron		8	1	90955435	2632
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000210887	retained_intron		8	1	90973717	4323
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000211552	retained_intron		8	1	90991563	3285
ENSMUSG00000056608	protein_coding	Chd9	ENSMUST00000109614	protein_coding	alternative2	8	1	90828835	11565
ENSMUSG00000035678	protein_coding	Tnfsf9	ENSMUST00000039490	protein_coding	principal1	17	1	57105325	1290
ENSMUSG00000106780	unprocessed_pseudogene	Gm7939	ENSMUST00000201233	unprocessed_pseudogene		5	-1	95102282	1050
ENSMUSG00000117064	processed_pseudogene	Gm49892	ENSMUST00000233215	processed_pseudogene		17	1	57115118	330
ENSMUSG00000036813	protein_coding	Entpd8	ENSMUST00000044078	protein_coding	principal2	2	1	25080322	2299
ENSMUSG00000092166	protein_coding	Gm7942	ENSMUST00000238517	protein_coding	principal5	5	1	95106704	1528
ENSMUSG00000019489	protein_coding	Cd70	ENSMUST00000019633	protein_coding	principal1	17	-1	57149777	842
ENSMUSG00000092166	protein_coding	Gm7942	ENSMUST00000238343	protein_coding	alternative2	5	1	95106704	1058
ENSMUSG00000092166	protein_coding	Gm7942	ENSMUST00000163216	protein_coding		5	1	95106938	1500
ENSMUSG00000036813	protein_coding	Entpd8	ENSMUST00000114380	protein_coding	principal2	2	1	25080325	2301
ENSMUSG00000102202	lincRNA	Gm33280	ENSMUST00000193983	lincRNA		1	1	36132042	4340
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000198884	protein_coding		9	1	111019271	616
ENSMUSG00000036813	protein_coding	Entpd8	ENSMUST00000152326	retained_intron		2	1	25080509	1823
ENSMUSG00000036813	protein_coding	Entpd8	ENSMUST00000149470	retained_intron		2	1	25081811	1755
ENSMUSG00000036813	protein_coding	Entpd8	ENSMUST00000114376	protein_coding	alternative2	2	1	25081818	1942
ENSMUSG00000005824	protein_coding	Tnfsf14	ENSMUST00000005976	protein_coding	principal1	17	-1	57194177	1847
ENSMUSG00000036813	protein_coding	Entpd8	ENSMUST00000150625	nonsense_mediated_decay		2	1	25082033	458
ENSMUSG00000095996	protein_coding	Gm16513	ENSMUST00000201663	protein_coding	principal1	5	1	95182624	2485
ENSMUSG00000036813	protein_coding	Entpd8	ENSMUST00000127384	retained_intron		2	1	25084677	798
ENSMUSG00000104600	sense_intronic	Dmrt1i	ENSMUST00000197311	sense_intronic		5	1	144357923	718
ENSMUSG00000099353	transcribed_unitary_pseudogene	1700031M16Rik	ENSMUST00000191037	processed_transcript		15	1	98398419	711
ENSMUSG00000104600	sense_intronic	Dmrt1i	ENSMUST00000196478	sense_intronic		5	1	144358525	655
ENSMUSG00000104600	sense_intronic	Dmrt1i	ENSMUST00000196370	sense_intronic		5	1	144358525	579
ENSMUSG00000095996	protein_coding	Gm16513	ENSMUST00000101023	protein_coding	principal1	5	1	95190874	2832
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000182573	nonsense_mediated_decay		16	-1	29456580	3010
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000196777	protein_coding		9	1	111019292	567
ENSMUSG00000096066	protein_coding	Gm10424	ENSMUST00000201031	protein_coding	principal1	5	-1	95272768	1848
ENSMUSG00000096066	protein_coding	Gm10424	ENSMUST00000180232	protein_coding		5	-1	95271588	1221
ENSMUSG00000099353	transcribed_unitary_pseudogene	1700031M16Rik	ENSMUST00000189907	processed_transcript		15	1	98398426	969
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000196209	protein_coding		9	1	111019292	269
ENSMUSG00000107348	unprocessed_pseudogene	Gm6468	ENSMUST00000201076	unprocessed_pseudogene		5	1	95280462	1443
ENSMUSG00000038859	protein_coding	Baiap2l1	ENSMUST00000055190	protein_coding	principal1	5	-1	144358112	3247
ENSMUSG00000038859	protein_coding	Baiap2l1	ENSMUST00000129287	processed_transcript		5	-1	144288907	712
ENSMUSG00000087484	antisense	2900089D17Rik	ENSMUST00000124015	antisense		5	-1	144246506	2475
ENSMUSG00000087484	antisense	2900089D17Rik	ENSMUST00000153130	antisense		5	-1	144256186	422
ENSMUSG00000084166	processed_pseudogene	Gm6451	ENSMUST00000121488	processed_pseudogene		X	-1	151414384	717
ENSMUSG00000083574	processed_pseudogene	Gm15709	ENSMUST00000118354	processed_pseudogene		5	1	144406602	213
ENSMUSG00000086894	sense_intronic	Gm15708	ENSMUST00000156467	sense_intronic		5	1	144277061	1765
ENSMUSG00000086894	sense_intronic	Gm15708	ENSMUST00000198873	sense_intronic		5	1	144278875	1605
ENSMUSG00000099353	transcribed_unitary_pseudogene	1700031M16Rik	ENSMUST00000185508	processed_transcript		15	1	98398445	767
ENSMUSG00000113147	antisense	Gm47207	ENSMUST00000223298	antisense		12	1	99821678	413
ENSMUSG00000113577	processed_pseudogene	Gm19238	ENSMUST00000221936	processed_pseudogene		12	-1	99805648	1260
ENSMUSG00000047843	protein_coding	Bri3	ENSMUST00000110695	protein_coding		5	1	144244437	669
ENSMUSG00000047843	protein_coding	Bri3	ENSMUST00000155491	nonsense_mediated_decay		5	1	144255225	903
ENSMUSG00000099353	transcribed_unitary_pseudogene	1700031M16Rik	ENSMUST00000186090	processed_transcript		15	1	98398445	605
ENSMUSG00000099353	transcribed_unitary_pseudogene	1700031M16Rik	ENSMUST00000185584	processed_transcript		15	1	98398445	547
ENSMUSG00000022090	protein_coding	Pdlim2	ENSMUST00000022681	protein_coding	principal1	14	-1	70177681	1523
ENSMUSG00000099353	transcribed_unitary_pseudogene	1700031M16Rik	ENSMUST00000189724	processed_transcript		15	1	98398445	824
ENSMUSG00000099353	transcribed_unitary_pseudogene	1700031M16Rik	ENSMUST00000191513	processed_transcript		15	1	98398445	847
ENSMUSG00000047843	protein_coding	Bri3	ENSMUST00000056578	protein_coding	principal1	5	1	144255234	955
ENSMUSG00000099353	transcribed_unitary_pseudogene	1700031M16Rik	ENSMUST00000231222	transcribed_unitary_pseudogene		15	1	98399065	343
ENSMUSG00000022090	protein_coding	Pdlim2	ENSMUST00000153735	protein_coding	principal1	14	-1	70176819	1578
ENSMUSG00000032126	protein_coding	Hmbs	ENSMUST00000077353	protein_coding	principal3	9	-1	44344228	1605
ENSMUSG00000022090	protein_coding	Pdlim2	ENSMUST00000129174	protein_coding		14	-1	70167839	729
ENSMUSG00000022090	protein_coding	Pdlim2	ENSMUST00000127836	protein_coding		14	-1	70168394	920
ENSMUSG00000096069	protein_coding	Olfr61	ENSMUST00000210373	protein_coding		7	1	140628970	381
ENSMUSG00000022090	protein_coding	Pdlim2	ENSMUST00000125300	protein_coding		14	-1	70167973	473
ENSMUSG00000096069	protein_coding	Olfr61	ENSMUST00000210241	protein_coding	principal1	7	1	140628977	1348
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000035077	protein_coding	principal1	9	1	111019292	2743
ENSMUSG00000022090	protein_coding	Pdlim2	ENSMUST00000143393	protein_coding		14	-1	70175433	779
ENSMUSG00000096069	protein_coding	Olfr61	ENSMUST00000211685	protein_coding	principal1	7	1	140629020	1212
ENSMUSG00000063780	protein_coding	Olfr282	ENSMUST00000215320	protein_coding	principal1	15	1	98431225	1573
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000196122	protein_coding		9	1	111019310	675
ENSMUSG00000096069	protein_coding	Olfr61	ENSMUST00000084455	protein_coding	principal1	7	1	140637703	936
ENSMUSG00000063780	protein_coding	Olfr282	ENSMUST00000205491	protein_coding		15	1	98431674	420
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000198152	nonsense_mediated_decay		9	1	111022416	643
ENSMUSG00000063780	protein_coding	Olfr282	ENSMUST00000213608	protein_coding	principal1	15	1	98431678	1374
ENSMUSG00000022090	protein_coding	Pdlim2	ENSMUST00000141363	retained_intron		14	-1	70176819	944
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000200459	retained_intron		9	1	111024386	683
ENSMUSG00000063780	protein_coding	Olfr282	ENSMUST00000075851	protein_coding	principal1	15	1	98437470	928
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000197893	retained_intron		9	1	111027122	348
ENSMUSG00000041245	protein_coding	Wnk3	ENSMUST00000184730	protein_coding	alternative2	X	1	151198078	5253
ENSMUSG00000022090	protein_coding	Pdlim2	ENSMUST00000135944	retained_intron		14	-1	70175426	2635
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000199313	protein_coding		9	1	111027360	233
ENSMUSG00000115964	processed_pseudogene	Gm6979	ENSMUST00000231084	processed_pseudogene		15	1	98450358	487
ENSMUSG00000022090	protein_coding	Pdlim2	ENSMUST00000138792	retained_intron		14	-1	70175420	608
ENSMUSG00000041245	protein_coding	Wnk3	ENSMUST00000184392	protein_coding	principal4	X	1	151198078	5394
ENSMUSG00000022090	protein_coding	Pdlim2	ENSMUST00000123125	retained_intron		14	-1	70171986	372
ENSMUSG00000032126	protein_coding	Hmbs	ENSMUST00000097558	protein_coding	alternative1	9	-1	44342381	1534
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000199815	nonsense_mediated_decay		9	1	111031121	373
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000198233	retained_intron		9	1	111035639	511
ENSMUSG00000032496	protein_coding	Ltf	ENSMUST00000197575	protein_coding		9	1	111038805	511
ENSMUSG00000032126	protein_coding	Hmbs	ENSMUST00000216658	protein_coding		9	-1	44337975	877
ENSMUSG00000032987	protein_coding	Olfr281	ENSMUST00000217517	protein_coding	principal1	15	1	98452588	4535
ENSMUSG00000032126	protein_coding	Hmbs	ENSMUST00000215859	retained_intron		9	-1	44339716	500
ENSMUSG00000058869	transcribed_processed_pseudogene	Gm4832	ENSMUST00000183295	processed_transcript		17	1	88125512	375
ENSMUSG00000104654	TEC	Gm43814	ENSMUST00000197851	TEC		9	-1	111053193	413
ENSMUSG00000032126	protein_coding	Hmbs	ENSMUST00000214967	retained_intron		9	-1	44339531	308
ENSMUSG00000058869	transcribed_processed_pseudogene	Gm4832	ENSMUST00000182679	transcribed_processed_pseudogene		17	1	88130715	399
ENSMUSG00000032987	protein_coding	Olfr281	ENSMUST00000109163	protein_coding	principal1	15	1	98456285	1058
ENSMUSG00000032126	protein_coding	Hmbs	ENSMUST00000214012	retained_intron		9	-1	44341233	696
ENSMUSG00000097676	lincRNA	Gm26612	ENSMUST00000180785	lincRNA		17	-1	88159761	1055
ENSMUSG00000041245	protein_coding	Wnk3	ENSMUST00000149140	nonsense_mediated_decay		X	1	151198140	5367
ENSMUSG00000036805	protein_coding	Noxa1	ENSMUST00000114373	protein_coding	alternative2	2	-1	25095131	1575
ENSMUSG00000032126	protein_coding	Hmbs	ENSMUST00000216852	nonsense_mediated_decay		9	-1	44342305	445
ENSMUSG00000041245	protein_coding	Wnk3	ENSMUST00000131844	processed_transcript		X	1	151207750	609
ENSMUSG00000108728	protein_coding	OR5BS1P	ENSMUST00000216180	protein_coding	principal1	15	1	98469896	4944
ENSMUSG00000117369	lincRNA	Gm31499	ENSMUST00000233989	lincRNA		17	1	88168487	725
ENSMUSG00000032126	protein_coding	Hmbs	ENSMUST00000215934	retained_intron		9	-1	44342307	2293
ENSMUSG00000032126	protein_coding	Hmbs	ENSMUST00000215091	protein_coding		9	-1	44342305	409
ENSMUSG00000041245	protein_coding	Wnk3	ENSMUST00000133852	processed_transcript		X	1	151294520	6410
ENSMUSG00000043953	protein_coding	Ccrl2	ENSMUST00000111888	protein_coding	principal1	9	-1	111057270	2459
ENSMUSG00000041245	protein_coding	Wnk3	ENSMUST00000096285	protein_coding	alternative2	X	1	151198140	8551
ENSMUSG00000036805	protein_coding	Noxa1	ENSMUST00000044018	protein_coding	principal3	2	-1	25095149	1617
ENSMUSG00000021176	protein_coding	Efcab11	ENSMUST00000221929	protein_coding		12	-1	99883423	635
ENSMUSG00000117497	lincRNA	1700116H05Rik	ENSMUST00000234143	lincRNA		17	-1	88306887	3806
ENSMUSG00000084771	antisense	A230072E10Rik	ENSMUST00000175942	antisense		X	-1	151344846	2940
ENSMUSG00000117497	lincRNA	1700116H05Rik	ENSMUST00000234211	lincRNA		17	-1	88305535	549
ENSMUSG00000022991	protein_coding	Lalba	ENSMUST00000023726	protein_coding	principal1	15	-1	98482721	771
ENSMUSG00000043953	protein_coding	Ccrl2	ENSMUST00000199839	protein_coding	principal1	9	-1	111057519	1864
ENSMUSG00000021176	protein_coding	Efcab11	ENSMUST00000046485	protein_coding	principal1	12	-1	99883442	2068
ENSMUSG00000117497	lincRNA	1700116H05Rik	ENSMUST00000234925	lincRNA		17	-1	88305378	396
ENSMUSG00000084771	antisense	A230072E10Rik	ENSMUST00000146161	antisense		X	-1	151299285	676
ENSMUSG00000043953	protein_coding	Ccrl2	ENSMUST00000195968	protein_coding		9	-1	111057246	569
ENSMUSG00000084771	antisense	A230072E10Rik	ENSMUST00000176662	antisense		X	-1	151311406	641
ENSMUSG00000021176	protein_coding	Efcab11	ENSMUST00000223114	protein_coding	principal1	12	-1	99884412	1122
ENSMUSG00000117351	lincRNA	Gm31615	ENSMUST00000234514	lincRNA		17	-1	88388699	1125
ENSMUSG00000084771	antisense	A230072E10Rik	ENSMUST00000175825	antisense		X	-1	151341879	3292
ENSMUSG00000097529	processed_pseudogene	Rp31-ps19	ENSMUST00000180929	processed_pseudogene		9	-1	111071533	353
ENSMUSG00000021176	protein_coding	Efcab11	ENSMUST00000220875	nonsense_mediated_decay		12	-1	99882857	713
ENSMUSG00000108805	unprocessed_pseudogene	Olfr278-ps1	ENSMUST00000205676	unprocessed_pseudogene		15	1	98499405	238
ENSMUSG00000054036	protein_coding	Olfr279	ENSMUST00000205772	protein_coding	principal1	15	1	98492402	5330
ENSMUSG00000074576	protein_coding	Mocs3	ENSMUST00000099071	protein_coding	principal1	2	1	168230622	1973
ENSMUSG00000054036	protein_coding	Olfr279	ENSMUST00000216822	protein_coding	principal1	15	1	98492402	5605
ENSMUSG00000054036	protein_coding	Olfr279	ENSMUST00000050451	protein_coding	principal1	15	1	98497474	933
ENSMUSG00000083342	processed_pseudogene	Gm14237	ENSMUST00000122080	processed_pseudogene		2	-1	168242430	430
ENSMUSG00000021176	protein_coding	Efcab11	ENSMUST00000221801	retained_intron		12	-1	99883503	3131
ENSMUSG00000021176	protein_coding	Efcab11	ENSMUST00000223108	processed_transcript		12	-1	99883421	667
ENSMUSG00000021176	protein_coding	Efcab11	ENSMUST00000221197	processed_transcript		12	-1	99884439	404
ENSMUSG00000113877	TEC	Gm47208	ENSMUST00000220762	TEC		12	-1	99762254	904
ENSMUSG00000049565	protein_coding	Aknad1	ENSMUST00000133931	protein_coding	principal1	3	1	108739658	2603
ENSMUSG00000113540	TEC	Gm47206	ENSMUST00000222111	TEC		12	-1	99832219	2267
ENSMUSG00000074575	protein_coding	Kcng1	ENSMUST00000109191	protein_coding	principal1	2	-1	168281132	4089
ENSMUSG00000049565	protein_coding	Aknad1	ENSMUST00000123556	nonsense_mediated_decay		3	1	108744393	2174
ENSMUSG00000074575	protein_coding	Kcng1	ENSMUST00000131749	protein_coding		2	-1	168281736	526
ENSMUSG00000049565	protein_coding	Aknad1	ENSMUST00000150998	retained_intron		3	1	108752526	5166
ENSMUSG00000049565	protein_coding	Aknad1	ENSMUST00000147916	retained_intron		3	1	108760214	540
ENSMUSG00000074575	protein_coding	Kcng1	ENSMUST00000099069	protein_coding	principal1	2	-1	168269331	2316
ENSMUSG00000079424	protein_coding	Gm3259	ENSMUST00000161225	processed_transcript		5	1	95305911	2623
ENSMUSG00000079424	protein_coding	Gm3259	ENSMUST00000160090	retained_intron		5	1	95305947	2464
ENSMUSG00000079424	protein_coding	Gm3259	ENSMUST00000101015	protein_coding	principal2	5	1	95305957	2504
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000237243	retained_intron		18	1	36528147	4516
ENSMUSG00000079424	protein_coding	Gm3259	ENSMUST00000160045	protein_coding	alternative2	5	1	95305966	1847
ENSMUSG00000079424	protein_coding	Gm3259	ENSMUST00000185432	protein_coding		5	1	95340209	1077
ENSMUSG00000107122	unprocessed_pseudogene	Gm32072	ENSMUST00000200803	unprocessed_pseudogene		5	1	95381054	1434
ENSMUSG00000106821	unprocessed_pseudogene	Gm7961	ENSMUST00000201338	unprocessed_pseudogene		5	-1	95419751	1436
ENSMUSG00000107357	unprocessed_pseudogene	Gm42662	ENSMUST00000202539	unprocessed_pseudogene		5	-1	95428628	1431
ENSMUSG00000025262	protein_coding	Fam120c	ENSMUST00000073364	protein_coding	principal1	X	1	151344175	5463
ENSMUSG00000025262	protein_coding	Fam120c	ENSMUST00000125924	retained_intron		X	1	151344175	5823
ENSMUSG00000083596	processed_pseudogene	Rpl21-ps15	ENSMUST00000121545	processed_pseudogene		X	-1	151215649	483
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000182627	protein_coding	principal3	16	-1	29541597	4238
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000057018	protein_coding	alternative2	16	-1	29541483	4054
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000182676	processed_transcript		16	-1	29408325	958
ENSMUSG00000016757	protein_coding	Ttll12	ENSMUST00000016901	protein_coding	principal1	15	-1	83595157	3774
ENSMUSG00000016757	protein_coding	Ttll12	ENSMUST00000136066	nonsense_mediated_decay		15	-1	83595157	3575
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000182013	nonsense_mediated_decay		16	-1	29544864	3809
ENSMUSG00000016757	protein_coding	Ttll12	ENSMUST00000134334	retained_intron		15	-1	83586892	709
ENSMUSG00000032717	protein_coding	Mdfi	ENSMUST00000113280	protein_coding		17	-1	47833241	1281
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000182094	retained_intron		16	-1	29407638	356
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000182357	retained_intron		16	-1	29440123	1501
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000182168	nonsense_mediated_decay		16	-1	29441160	552
ENSMUSG00000071229	protein_coding	Timm8a2	ENSMUST00000045976	protein_coding	principal1	14	1	122034674	913
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000039090	protein_coding		16	-1	29544864	2878
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000182824	retained_intron		16	-1	29544798	1045
ENSMUSG00000115121	lincRNA	Gm49236	ENSMUST00000226452	lincRNA		14	-1	122091226	708
ENSMUSG00000038094	protein_coding	Atp13a4	ENSMUST00000182694	retained_intron		16	-1	29544859	1404
ENSMUSG00000115121	lincRNA	Gm49236	ENSMUST00000226723	lincRNA		14	-1	122091226	657
ENSMUSG00000118569	unprocessed_pseudogene	AC175464.1	ENSMUST00000239142	unprocessed_pseudogene		16	1	29502490	592
ENSMUSG00000085615	lincRNA	A330035P11Rik	ENSMUST00000144926	lincRNA		14	-1	122106953	3074
ENSMUSG00000085615	lincRNA	A330035P11Rik	ENSMUST00000131416	lincRNA		14	-1	122106974	2257
ENSMUSG00000082423	processed_pseudogene	Gm15148	ENSMUST00000117602	processed_pseudogene		X	-1	151493269	156
ENSMUSG00000032717	protein_coding	Mdfi	ENSMUST00000066368	protein_coding	principal1	17	-1	47834691	1711
ENSMUSG00000032717	protein_coding	Mdfi	ENSMUST00000035375	protein_coding	principal1	17	-1	47833291	1371
ENSMUSG00000032717	protein_coding	Mdfi	ENSMUST00000125745	processed_transcript		17	-1	47833258	857
ENSMUSG00000032717	protein_coding	Mdfi	ENSMUST00000131971	protein_coding		17	-1	47833169	580
ENSMUSG00000066538	processed_pseudogene	Gm6254	ENSMUST00000168178	processed_pseudogene		14	1	122117938	1072
ENSMUSG00000032717	protein_coding	Mdfi	ENSMUST00000140234	retained_intron		17	-1	47833261	1528
ENSMUSG00000090674	processed_pseudogene	Gm17082	ENSMUST00000166043	processed_pseudogene		14	1	122121553	1091
ENSMUSG00000039958	protein_coding	Etfbkmt	ENSMUST00000126406	protein_coding		6	1	149139849	478
ENSMUSG00000032717	protein_coding	Mdfi	ENSMUST00000152455	protein_coding		17	-1	47833272	714
ENSMUSG00000032717	protein_coding	Mdfi	ENSMUST00000132125	protein_coding		17	-1	47833245	423
ENSMUSG00000032717	protein_coding	Mdfi	ENSMUST00000129360	protein_coding		17	-1	47833230	334
ENSMUSG00000090089	transcribed_processed_pseudogene	Magea9-ps	ENSMUST00000140655	processed_transcript		X	1	72869367	732
ENSMUSG00000090089	transcribed_processed_pseudogene	Magea9-ps	ENSMUST00000167328	transcribed_processed_pseudogene		X	1	72869367	899
ENSMUSG00000039958	protein_coding	Etfbkmt	ENSMUST00000047531	protein_coding	principal1	6	1	149141513	1562
ENSMUSG00000039958	protein_coding	Etfbkmt	ENSMUST00000111548	protein_coding		6	1	149141516	1398
ENSMUSG00000039958	protein_coding	Etfbkmt	ENSMUST00000111547	protein_coding		6	1	149141554	1250
ENSMUSG00000039958	protein_coding	Etfbkmt	ENSMUST00000134306	protein_coding		6	1	149141564	848
ENSMUSG00000039958	protein_coding	Etfbkmt	ENSMUST00000147934	protein_coding		6	1	149141574	1092
ENSMUSG00000039958	protein_coding	Etfbkmt	ENSMUST00000166416	protein_coding		6	1	149141638	698
ENSMUSG00000039958	protein_coding	Etfbkmt	ENSMUST00000111551	protein_coding	principal1	6	1	149141646	1558
ENSMUSG00000039958	protein_coding	Etfbkmt	ENSMUST00000179873	protein_coding	principal1	6	1	149141513	1576
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000200094	protein_coding		9	1	111117592	848
ENSMUSG00000022992	protein_coding	Kansl2	ENSMUST00000230542	protein_coding	principal2	15	-1	98534264	3596
ENSMUSG00000022992	protein_coding	Kansl2	ENSMUST00000116400	protein_coding	alternative2	15	-1	98534244	2324
ENSMUSG00000022992	protein_coding	Kansl2	ENSMUST00000231066	nonsense_mediated_decay		15	-1	98534264	1980
ENSMUSG00000027634	protein_coding	Ndrg3	ENSMUST00000069600	protein_coding	alternative1	2	-1	156992043	2612
ENSMUSG00000022992	protein_coding	Kansl2	ENSMUST00000229818	retained_intron		15	-1	98529453	612
ENSMUSG00000027634	protein_coding	Ndrg3	ENSMUST00000072298	protein_coding	principal3	2	-1	156992056	2586
ENSMUSG00000027634	protein_coding	Ndrg3	ENSMUST00000156491	processed_transcript		2	-1	156944066	595
ENSMUSG00000027634	protein_coding	Ndrg3	ENSMUST00000149599	processed_transcript		2	-1	156935005	216
ENSMUSG00000027634	protein_coding	Ndrg3	ENSMUST00000109558	protein_coding		2	-1	156992035	4023
ENSMUSG00000025544	protein_coding	Tm9sf2	ENSMUST00000026624	protein_coding	principal1	14	1	122107038	3107
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000237174	protein_coding		18	1	36528147	3008
ENSMUSG00000027634	protein_coding	Ndrg3	ENSMUST00000140297	processed_transcript		2	-1	156953393	706
ENSMUSG00000025544	protein_coding	Tm9sf2	ENSMUST00000170007	nonsense_mediated_decay		14	1	122107138	627
ENSMUSG00000022992	protein_coding	Kansl2	ENSMUST00000023727	protein_coding	alternative2	15	-1	98534244	2311
ENSMUSG00000025544	protein_coding	Tm9sf2	ENSMUST00000171318	protein_coding		14	1	122107268	1494
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000236124	protein_coding	principal5	18	1	36528149	3152
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000236779	protein_coding		18	1	36528151	2966
ENSMUSG00000027634	protein_coding	Ndrg3	ENSMUST00000131955	processed_transcript		2	-1	156992000	666
ENSMUSG00000027634	protein_coding	Ndrg3	ENSMUST00000156651	processed_transcript		2	-1	156991927	410
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000238191	retained_intron		18	1	36528151	3348
ENSMUSG00000027634	protein_coding	Ndrg3	ENSMUST00000126627	retained_intron		2	-1	156992047	2311
ENSMUSG00000027634	protein_coding	Ndrg3	ENSMUST00000132748	processed_transcript		2	-1	156991996	436
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000235181	protein_coding		18	1	36528152	2945
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000236126	protein_coding	alternative2	18	1	36528157	2965
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000237595	protein_coding		18	1	36529227	2733
ENSMUSG00000091050	antisense	9330020H09Rik	ENSMUST00000163781	antisense		15	1	98567324	2147
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000235848	retained_intron		18	1	36531035	1550
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000235382	processed_transcript		18	1	36541492	402
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000238956	protein_coding		4	-1	149307692	10434
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000074298	protein_coding		18	1	36528157	2714
ENSMUSG00000025545	protein_coding	Clybl	ENSMUST00000026625	protein_coding	principal1	14	1	122181704	1231
ENSMUSG00000024485	protein_coding	Slc4a9	ENSMUST00000115694	protein_coding		18	1	36528157	2861
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000060537	protein_coding	alternative1	4	-1	149307692	10233
ENSMUSG00000025545	protein_coding	Clybl	ENSMUST00000226136	processed_transcript		14	1	122258041	1359
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000150853	retained_intron		4	-1	149186200	3475
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000139123	protein_coding		4	-1	149198494	3391
ENSMUSG00000100585	antisense	1700108J01Rik	ENSMUST00000187423	antisense		14	-1	122233654	484
ENSMUSG00000115263	antisense	Gm5089	ENSMUST00000228409	antisense		14	-1	122406743	1284
ENSMUSG00000011960	protein_coding	Ccnt1	ENSMUST00000169707	protein_coding	principal1	15	-1	98570923	7397
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000055647	protein_coding	principal3	4	-1	149307506	5992
ENSMUSG00000064052	processed_transcript	Gm5089	ENSMUST00000081580	lincRNA		14	-1	122451115	2008
ENSMUSG00000011960	protein_coding	Ccnt1	ENSMUST00000163180	processed_transcript		15	-1	98543020	683
ENSMUSG00000064052	processed_transcript	Gm5089	ENSMUST00000238321	retained_intron		14	-1	122436895	1668
ENSMUSG00000011960	protein_coding	Ccnt1	ENSMUST00000168928	nonsense_mediated_decay		15	-1	98567636	2011
ENSMUSG00000003464	protein_coding	Pex19	ENSMUST00000075895	protein_coding	principal1	1	1	172126755	1917
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000154411	retained_intron		4	-1	149210099	620
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000123593	retained_intron		4	-1	149213791	586
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000133526	retained_intron		4	-1	149223518	730
ENSMUSG00000003464	protein_coding	Pex19	ENSMUST00000111252	protein_coding		1	1	172126762	2844
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000030806	protein_coding		4	-1	149307623	6991
ENSMUSG00000003464	protein_coding	Pex19	ENSMUST00000133546	retained_intron		1	1	172126773	368
ENSMUSG00000011960	protein_coding	Ccnt1	ENSMUST00000170452	retained_intron		15	-1	98554685	899
ENSMUSG00000011960	protein_coding	Ccnt1	ENSMUST00000169674	retained_intron		15	-1	98547020	616
ENSMUSG00000041703	protein_coding	Zic5	ENSMUST00000039118	protein_coding	principal1	14	-1	122465677	4767
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000140749	retained_intron		4	-1	149247979	602
ENSMUSG00000003464	protein_coding	Pex19	ENSMUST00000127662	retained_intron		1	1	172126773	642
ENSMUSG00000003464	protein_coding	Pex19	ENSMUST00000147799	retained_intron		1	1	172126756	855
ENSMUSG00000041703	protein_coding	Zic5	ENSMUST00000143084	processed_transcript		14	-1	122460021	705
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000150230	retained_intron		4	-1	149307693	2980
ENSMUSG00000011960	protein_coding	Ccnt1	ENSMUST00000164294	retained_intron		15	-1	98565139	669
ENSMUSG00000003464	protein_coding	Pex19	ENSMUST00000133081	retained_intron		1	1	172133960	599
ENSMUSG00000063077	protein_coding	Kif1b	ENSMUST00000132072	retained_intron		4	-1	149307664	587
ENSMUSG00000011960	protein_coding	Ccnt1	ENSMUST00000164565	retained_intron		15	-1	98567545	465
ENSMUSG00000085555	processed_transcript	2610035F20Rik	ENSMUST00000135485	retained_intron		14	-1	122473579	1900
ENSMUSG00000011960	protein_coding	Ccnt1	ENSMUST00000130921	retained_intron		15	-1	98567680	2015
ENSMUSG00000085555	processed_transcript	2610035F20Rik	ENSMUST00000177306	processed_transcript		14	-1	122475199	1149
ENSMUSG00000011960	protein_coding	Ccnt1	ENSMUST00000012104	protein_coding	principal1	15	-1	98567636	2175
ENSMUSG00000046806	protein_coding	Cyren	ENSMUST00000055097	protein_coding	principal3	6	-1	34878021	3681
ENSMUSG00000038467	protein_coding	Chmp4b	ENSMUST00000151668	processed_transcript		2	1	154651705	1528
ENSMUSG00000070732	protein_coding	Rbm44	ENSMUST00000190965	retained_intron		1	1	91145089	2670
ENSMUSG00000046806	protein_coding	Cyren	ENSMUST00000115007	protein_coding	principal3	6	-1	34878060	3326
ENSMUSG00000070732	protein_coding	Rbm44	ENSMUST00000188818	protein_coding		1	1	91145101	630
ENSMUSG00000046806	protein_coding	Cyren	ENSMUST00000115006	protein_coding	alternative2	6	-1	34878009	1501
ENSMUSG00000046806	protein_coding	Cyren	ENSMUST00000118559	protein_coding		6	-1	34877129	717
ENSMUSG00000046806	protein_coding	Cyren	ENSMUST00000140458	retained_intron		6	-1	34876980	709
ENSMUSG00000000915	protein_coding	Hip1r	ENSMUST00000000939	protein_coding	principal1	5	1	123973628	6735
ENSMUSG00000057137	protein_coding	Tmem140	ENSMUST00000123019	processed_transcript		6	1	34863146	3268
ENSMUSG00000000915	protein_coding	Hip1r	ENSMUST00000167879	protein_coding		5	1	123980254	357
ENSMUSG00000057137	protein_coding	Tmem140	ENSMUST00000074949	protein_coding	principal1	6	1	34863146	2614
ENSMUSG00000038467	protein_coding	Chmp4b	ENSMUST00000044277	protein_coding	principal1	2	1	154657018	1616
ENSMUSG00000000915	protein_coding	Hip1r	ENSMUST00000166258	nonsense_mediated_decay		5	1	123994805	817
ENSMUSG00000038467	protein_coding	Chmp4b	ENSMUST00000136788	retained_intron		2	1	154691070	720
ENSMUSG00000057137	protein_coding	Tmem140	ENSMUST00000202010	protein_coding		6	1	34863262	473
ENSMUSG00000000915	protein_coding	Hip1r	ENSMUST00000171407	retained_intron		5	1	123999410	598
ENSMUSG00000057137	protein_coding	Tmem140	ENSMUST00000201749	processed_transcript		6	1	34867020	361
ENSMUSG00000070732	protein_coding	Rbm44	ENSMUST00000094698	protein_coding	principal1	1	1	91145103	3851
ENSMUSG00000000915	protein_coding	Hip1r	ENSMUST00000198664	nonsense_mediated_decay		5	1	123999786	747
ENSMUSG00000057137	protein_coding	Tmem140	ENSMUST00000202999	protein_coding		6	1	34867052	345
ENSMUSG00000070732	protein_coding	Rbm44	ENSMUST00000185229	retained_intron		1	1	91168629	556
ENSMUSG00000000915	protein_coding	Hip1r	ENSMUST00000167325	retained_intron		5	1	124000383	835
ENSMUSG00000057137	protein_coding	Tmem140	ENSMUST00000202764	processed_transcript		6	1	34872714	426
ENSMUSG00000000915	protein_coding	Hip1r	ENSMUST00000166684	retained_intron		5	1	124000599	884
ENSMUSG00000040888	protein_coding	Gfer	ENSMUST00000234811	processed_transcript		17	-1	24694986	897
ENSMUSG00000066278	protein_coding	Vps37b	ENSMUST00000040967	protein_coding	principal1	5	-1	124032270	2522
ENSMUSG00000066278	protein_coding	Vps37b	ENSMUST00000199306	processed_transcript		5	-1	124011713	922
ENSMUSG00000066278	protein_coding	Vps37b	ENSMUST00000199741	processed_transcript		5	-1	124032258	360
ENSMUSG00000040888	protein_coding	Gfer	ENSMUST00000234197	nonsense_mediated_decay		17	-1	24696093	1162
ENSMUSG00000102725	TEC	Gm37939	ENSMUST00000192309	TEC		5	1	124004648	447
ENSMUSG00000040888	protein_coding	Gfer	ENSMUST00000234859	protein_coding		17	-1	24695706	1706
ENSMUSG00000040888	protein_coding	Gfer	ENSMUST00000234520	nonsense_mediated_decay		17	-1	24696112	1177
ENSMUSG00000040888	protein_coding	Gfer	ENSMUST00000046839	protein_coding	principal2	17	-1	24696156	1776
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000135074	protein_coding	principal1	2	1	120404768	4780
ENSMUSG00000040888	protein_coding	Gfer	ENSMUST00000234235	protein_coding	alternative2	17	-1	24696090	682
ENSMUSG00000031347	protein_coding	Cetn2	ENSMUST00000114551	protein_coding	principal1	X	-1	72918411	1286
ENSMUSG00000031347	protein_coding	Cetn2	ENSMUST00000033713	protein_coding		X	-1	72916856	1026
ENSMUSG00000031347	protein_coding	Cetn2	ENSMUST00000114550	protein_coding		X	-1	72917993	1124
ENSMUSG00000031347	protein_coding	Cetn2	ENSMUST00000152200	protein_coding		X	-1	72918284	600
ENSMUSG00000089803	processed_pseudogene	Gm10171	ENSMUST00000126220	processed_pseudogene		1	-1	172144901	628
ENSMUSG00000082064	processed_pseudogene	Rpl5-ps2	ENSMUST00000119057	processed_pseudogene		2	1	154703809	891
ENSMUSG00000024164	protein_coding	C3	ENSMUST00000024988	protein_coding	principal1	17	-1	57228136	5136
ENSMUSG00000024164	protein_coding	C3	ENSMUST00000177425	protein_coding		17	-1	57222827	315
ENSMUSG00000105239	lincRNA	Gm43091	ENSMUST00000198157	lincRNA		5	-1	135672987	423
ENSMUSG00000024164	protein_coding	C3	ENSMUST00000177046	protein_coding		17	-1	57228003	554
ENSMUSG00000024164	protein_coding	C3	ENSMUST00000176457	processed_transcript		17	-1	57219972	662
ENSMUSG00000023723	protein_coding	Mrps23	ENSMUST00000024486	protein_coding	principal1	11	1	88204388	1332
ENSMUSG00000023723	protein_coding	Mrps23	ENSMUST00000118784	protein_coding		11	1	88204411	1404
ENSMUSG00000023723	protein_coding	Mrps23	ENSMUST00000139170	protein_coding		11	1	88204424	666
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000174064	protein_coding	principal1	7	-1	19699188	1408
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000152437	processed_transcript		2	1	120406114	3118
ENSMUSG00000023723	protein_coding	Mrps23	ENSMUST00000107915	protein_coding		11	1	88204424	332
ENSMUSG00000023723	protein_coding	Mrps23	ENSMUST00000144070	protein_coding		11	1	88204444	569
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000167646	processed_transcript		7	-1	19699052	728
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239357	lincRNA		9	-1	88522888	1481
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239203	retained_intron		9	-1	88522957	1519
ENSMUSG00000021741	processed_pseudogene	Gm5457	ENSMUST00000022260	processed_pseudogene		14	1	12867553	333
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000173739	protein_coding	principal1	7	-1	19698407	1221
ENSMUSG00000114561	processed_pseudogene	Gm48515	ENSMUST00000223657	processed_pseudogene		14	1	12992695	2485
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000174355	protein_coding	principal1	7	-1	19699008	1104
ENSMUSG00000114421	lincRNA	Gm48526	ENSMUST00000224173	lincRNA		14	1	13030370	740
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000182232	lincRNA		9	-1	88522974	826
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000003066	protein_coding	principal1	7	-1	19699052	1128
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000196981	protein_coding	alternative1	9	1	111118113	1839
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239369	lincRNA		9	-1	88523562	1678
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000172983	protein_coding		7	-1	19699038	817
ENSMUSG00000082163	processed_pseudogene	Gm14276	ENSMUST00000117941	processed_pseudogene		2	-1	156994892	720
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000098340	protein_coding	principal2	9	1	111118135	3191
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000174144	protein_coding		7	-1	19698621	816
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000043755	processed_transcript		2	1	120404224	4823
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000207525	retained_intron		7	-1	19697631	897
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000197256	protein_coding		9	1	111118445	1819
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000172808	protein_coding		7	-1	19698247	456
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000136993	processed_transcript		2	1	120404980	4279
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000174710	protein_coding		7	-1	19699050	514
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000153660	processed_transcript		2	1	120404210	3126
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000143409	processed_transcript		2	1	120404338	1477
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000183045	retained_intron		9	-1	88522888	939
ENSMUSG00000002985	protein_coding	Apoe	ENSMUST00000174191	protein_coding		7	-1	19698267	472
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000132835	retained_intron		2	1	120411413	1466
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239212	retained_intron		9	-1	88522888	1372
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000217341	protein_coding		9	1	111119429	2511
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239386	retained_intron		9	-1	88522888	1128
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000154574	processed_transcript		2	1	120403896	3099
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239184	retained_intron		9	-1	88522888	1104
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000239186	protein_coding		9	1	111119675	2421
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000154963	processed_transcript		2	1	120404201	369
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000131523	processed_transcript		2	1	120404202	622
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000182872	retained_intron		9	-1	88522888	1145
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000154404	processed_transcript		2	1	120404314	644
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000197241	protein_coding		9	1	111119675	1500
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000154435	processed_transcript		2	1	120404774	579
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000145134	processed_transcript		2	1	120423501	664
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000196703	protein_coding		9	1	111161303	448
ENSMUSG00000062646	protein_coding	Ganc	ENSMUST00000127367	retained_intron		2	1	120452579	950
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239227	retained_intron		9	-1	88522888	1312
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239359	retained_intron		9	-1	88522888	1471
ENSMUSG00000033007	protein_coding	Asic4	ENSMUST00000113577	protein_coding	alternative2	1	1	75450436	2667
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239278	retained_intron		9	-1	88522888	1534
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239219	retained_intron		9	-1	88522888	1636
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000239333	processed_transcript		9	1	111174216	2815
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239327	lincRNA		9	-1	88522888	705
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000239196	processed_transcript		9	1	111174233	285
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239285	lincRNA		9	-1	88522888	869
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000216430	protein_coding		9	1	111182259	1525
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239344	retained_intron		9	-1	88522890	1437
ENSMUSG00000033007	protein_coding	Asic4	ENSMUST00000037708	protein_coding	principal2	1	1	75450699	2464
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000217117	protein_coding		9	1	111182327	1363
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000180563	lincRNA		9	-1	88522891	947
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239365	lincRNA		9	-1	88522917	809
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000198986	protein_coding		9	1	111185192	605
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239274	lincRNA		9	-1	88522959	1037
ENSMUSG00000102605	TEC	Gm37264	ENSMUST00000194916	TEC		1	-1	75470761	2192
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000190033	retained_intron		9	-1	88522963	1408
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000182517	lincRNA		9	-1	88521965	442
ENSMUSG00000108634	lincRNA	Gm38534	ENSMUST00000206566	lincRNA		11	1	88253368	1909
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239284	retained_intron		9	-1	88522890	1533
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000197540	processed_transcript		9	1	111193041	2745
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239253	retained_intron		9	-1	88522939	1781
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000198127	retained_intron		9	1	111199454	475
ENSMUSG00000005514	protein_coding	Por	ENSMUST00000153500	protein_coding		5	1	135670033	918
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239377	lincRNA		9	-1	88522888	913
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000199711	retained_intron		9	1	111214193	662
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239379	retained_intron		9	-1	88522889	1623
ENSMUSG00000005514	protein_coding	Por	ENSMUST00000150058	processed_transcript		5	1	135674581	344
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000196906	retained_intron		9	1	111219170	822
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239290	retained_intron		9	-1	88522890	1392
ENSMUSG00000032497	protein_coding	Lrrfip2	ENSMUST00000035078	protein_coding		9	1	111118111	3260
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239192	retained_intron		9	-1	88522933	1012
ENSMUSG00000005514	protein_coding	Por	ENSMUST00000153515	protein_coding		5	1	135674585	747
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000102754	protein_coding	principal3	2	1	59160850	4614
ENSMUSG00000097195	processed_transcript	Snhg5	ENSMUST00000239193	retained_intron		9	-1	88522888	1156
ENSMUSG00000027635	protein_coding	Dsn1	ENSMUST00000103129	protein_coding	principal1	2	-1	157007075	2080
ENSMUSG00000022993	protein_coding	4930415O20Rik	ENSMUST00000023728	protein_coding	principal1	15	1	98571004	558
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000183359	nonsense_mediated_decay		2	1	59160881	4122
ENSMUSG00000027635	protein_coding	Dsn1	ENSMUST00000103130	protein_coding	principal1	2	-1	157007154	2636
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000123908	protein_coding		2	1	59160882	2663
ENSMUSG00000027635	protein_coding	Dsn1	ENSMUST00000146413	protein_coding		2	-1	157007030	753
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000037903	protein_coding		2	1	59161008	4378
ENSMUSG00000027635	protein_coding	Dsn1	ENSMUST00000141388	retained_intron		2	-1	157003256	639
ENSMUSG00000027635	protein_coding	Dsn1	ENSMUST00000124671	protein_coding		2	-1	157006301	415
ENSMUSG00000027635	protein_coding	Dsn1	ENSMUST00000154213	protein_coding		2	-1	157006574	899
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000183625	processed_transcript		2	1	59161020	428
ENSMUSG00000005514	protein_coding	Por	ENSMUST00000005651	protein_coding	principal1	5	1	135689036	2636
ENSMUSG00000005514	protein_coding	Por	ENSMUST00000122113	protein_coding		5	1	135689158	2606
ENSMUSG00000005514	protein_coding	Por	ENSMUST00000147515	retained_intron		5	1	135716005	918
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000184332	nonsense_mediated_decay		2	1	59161043	2344
ENSMUSG00000005514	protein_coding	Por	ENSMUST00000127096	protein_coding		5	1	135725728	505
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000122888	processed_transcript		2	1	59161927	306
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000184705	nonsense_mediated_decay		2	1	59161927	437
ENSMUSG00000005514	protein_coding	Por	ENSMUST00000149684	retained_intron		5	1	135731550	673
ENSMUSG00000005514	protein_coding	Por	ENSMUST00000132084	retained_intron		5	1	135733181	674
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000126749	processed_transcript		2	1	59200774	679
ENSMUSG00000032498	protein_coding	Mlh1	ENSMUST00000135218	nonsense_mediated_decay		9	-1	111271546	3762
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000112577	protein_coding		2	1	59229749	4222
ENSMUSG00000080972	processed_pseudogene	Gm16061	ENSMUST00000122167	processed_pseudogene		5	-1	135699019	857
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000124725	processed_transcript		2	1	59266184	806
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000151452	processed_transcript		2	1	59322616	2505
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000124127	processed_transcript		2	1	59342197	661
ENSMUSG00000026991	protein_coding	Pkp4	ENSMUST00000168631	protein_coding	alternative1	2	1	59160850	4484
ENSMUSG00000030724	protein_coding	Cd19	ENSMUST00000205997	retained_intron		7	-1	126414868	2928
ENSMUSG00000027882	protein_coding	Stxbp3	ENSMUST00000102621	protein_coding	principal1	3	-1	108840511	2419
ENSMUSG00000032425	protein_coding	Zfp949	ENSMUST00000162827	protein_coding	principal1	9	1	88548020	3472
ENSMUSG00000070677	protein_coding	D5Ertd577e	ENSMUST00000202481	protein_coding	principal1	5	1	95473553	2469
ENSMUSG00000032425	protein_coding	Zfp949	ENSMUST00000160652	protein_coding		9	1	88548044	574
ENSMUSG00000027882	protein_coding	Stxbp3	ENSMUST00000124782	retained_intron		3	-1	108802534	1375
ENSMUSG00000032425	protein_coding	Zfp949	ENSMUST00000162985	retained_intron		9	1	88548085	1542
ENSMUSG00000027882	protein_coding	Stxbp3	ENSMUST00000124903	retained_intron		3	-1	108797784	486
ENSMUSG00000070677	protein_coding	D5Ertd577e	ENSMUST00000094593	protein_coding	principal1	5	1	95456806	2462
ENSMUSG00000027882	protein_coding	Stxbp3	ENSMUST00000150010	retained_intron		3	-1	108805731	888
ENSMUSG00000032425	protein_coding	Zfp949	ENSMUST00000161232	protein_coding		9	1	88548100	773
ENSMUSG00000027882	protein_coding	Stxbp3	ENSMUST00000196679	protein_coding		3	-1	108840451	707
ENSMUSG00000032425	protein_coding	Zfp949	ENSMUST00000161458	protein_coding	principal1	9	1	88548183	3163
ENSMUSG00000027882	protein_coding	Stxbp3	ENSMUST00000200035	processed_transcript		3	-1	108840515	391
ENSMUSG00000027882	protein_coding	Stxbp3	ENSMUST00000138552	protein_coding		3	-1	108840526	1789
ENSMUSG00000027882	protein_coding	Stxbp3	ENSMUST00000106596	protein_coding		3	-1	108840510	553
ENSMUSG00000083975	processed_pseudogene	Gm14215	ENSMUST00000120578	processed_pseudogene		2	-1	154713722	221
ENSMUSG00000032498	protein_coding	Mlh1	ENSMUST00000035079	protein_coding	principal1	9	-1	111271791	2754
ENSMUSG00000032498	protein_coding	Mlh1	ENSMUST00000200145	retained_intron		9	-1	111230636	603
ENSMUSG00000066714	processed_pseudogene	Gm8062	ENSMUST00000139696	processed_pseudogene		13	1	73829932	444
ENSMUSG00000032498	protein_coding	Mlh1	ENSMUST00000128795	retained_intron		9	-1	111230948	514
ENSMUSG00000032498	protein_coding	Mlh1	ENSMUST00000123869	retained_intron		9	-1	111271600	2394
ENSMUSG00000032498	protein_coding	Mlh1	ENSMUST00000123713	retained_intron		9	-1	111247745	825
ENSMUSG00000032498	protein_coding	Mlh1	ENSMUST00000199404	protein_coding		9	-1	111257460	465
ENSMUSG00000032498	protein_coding	Mlh1	ENSMUST00000135695	nonsense_mediated_decay		9	-1	111261543	697
ENSMUSG00000032498	protein_coding	Mlh1	ENSMUST00000134316	processed_transcript		9	-1	111271534	667
ENSMUSG00000046785	protein_coding	Epm2aip1	ENSMUST00000135807	protein_coding	principal1	9	1	111271929	4245
ENSMUSG00000046785	protein_coding	Epm2aip1	ENSMUST00000060711	protein_coding	principal1	9	1	111271945	7149
ENSMUSG00000090693	protein_coding	Trim43a	ENSMUST00000164661	protein_coding	principal1	9	1	88580891	1981
ENSMUSG00000046785	protein_coding	Epm2aip1	ENSMUST00000200053	processed_transcript		9	1	111274102	578
ENSMUSG00000030724	protein_coding	Cd19	ENSMUST00000032968	protein_coding	alternative2	7	-1	126414872	2432
ENSMUSG00000090693	protein_coding	Trim43a	ENSMUST00000215498	protein_coding		9	1	88581037	361
ENSMUSG00000090693	protein_coding	Trim43a	ENSMUST00000216686	protein_coding		9	1	88581147	435
ENSMUSG00000030724	protein_coding	Cd19	ENSMUST00000206325	protein_coding	principal2	7	-1	126414889	2452
ENSMUSG00000030724	protein_coding	Cd19	ENSMUST00000205848	retained_intron		7	-1	126409796	315
ENSMUSG00000030724	protein_coding	Cd19	ENSMUST00000206871	retained_intron		7	-1	126414550	493
ENSMUSG00000033707	protein_coding	Lrrc24	ENSMUST00000049956	protein_coding	principal1	15	-1	76722173	1904
ENSMUSG00000033707	protein_coding	Lrrc24	ENSMUST00000146855	retained_intron		15	-1	76718416	594
ENSMUSG00000033707	protein_coding	Lrrc24	ENSMUST00000146725	retained_intron		15	-1	76722159	331
ENSMUSG00000116138	protein_coding	C030006K11Rik	ENSMUST00000036247	protein_coding	principal1	15	-1	76723840	1754
ENSMUSG00000116138	protein_coding	C030006K11Rik	ENSMUST00000231059	processed_transcript		15	-1	76723845	1820
ENSMUSG00000116138	protein_coding	C030006K11Rik	ENSMUST00000228990	nonsense_mediated_decay		15	-1	76723840	2030
ENSMUSG00000116138	protein_coding	C030006K11Rik	ENSMUST00000230372	retained_intron		15	-1	76723840	2364
ENSMUSG00000116138	protein_coding	C030006K11Rik	ENSMUST00000230559	retained_intron		15	-1	76723385	740
ENSMUSG00000116138	protein_coding	C030006K11Rik	ENSMUST00000229507	retained_intron		15	-1	76723824	685
ENSMUSG00000062296	protein_coding	Trank1	ENSMUST00000078626	protein_coding	principal1	9	1	111311739	10520
ENSMUSG00000039701	protein_coding	Usp53	ENSMUST00000090379	protein_coding	principal1	3	-1	122984510	6185
ENSMUSG00000100220	antisense	Gm29331	ENSMUST00000187215	antisense		15	1	98589990	605
ENSMUSG00000062296	protein_coding	Trank1	ENSMUST00000200151	processed_transcript		9	1	111311940	3356
ENSMUSG00000039701	protein_coding	Usp53	ENSMUST00000198814	retained_intron		3	-1	122949627	745
ENSMUSG00000062296	protein_coding	Trank1	ENSMUST00000197049	protein_coding		9	1	111312096	560
ENSMUSG00000021567	protein_coding	Nkd2	ENSMUST00000022051	protein_coding	principal3	13	-1	73847631	4016
ENSMUSG00000033728	protein_coding	Lrrc14	ENSMUST00000136840	protein_coding		15	1	76710623	1004
ENSMUSG00000039701	protein_coding	Usp53	ENSMUST00000199329	nonsense_mediated_decay		3	-1	122984323	1882
ENSMUSG00000021567	protein_coding	Nkd2	ENSMUST00000118096	protein_coding	alternative2	13	-1	73847612	2801
ENSMUSG00000039701	protein_coding	Usp53	ENSMUST00000197934	protein_coding		3	-1	122984506	2048
ENSMUSG00000039701	protein_coding	Usp53	ENSMUST00000197314	protein_coding		3	-1	122984504	3586
ENSMUSG00000039701	protein_coding	Usp53	ENSMUST00000199923	retained_intron		3	-1	122984510	1984
ENSMUSG00000021567	protein_coding	Nkd2	ENSMUST00000138899	retained_intron		13	-1	73847612	1456
ENSMUSG00000033728	protein_coding	Lrrc14	ENSMUST00000127208	protein_coding	principal1	15	1	76710638	4849
ENSMUSG00000039701	protein_coding	Usp53	ENSMUST00000197801	retained_intron		3	-1	122961449	306
ENSMUSG00000021567	protein_coding	Nkd2	ENSMUST00000222004	protein_coding		13	-1	73847612	705
ENSMUSG00000039701	protein_coding	Usp53	ENSMUST00000199401	protein_coding		3	-1	122984471	664
ENSMUSG00000033728	protein_coding	Lrrc14	ENSMUST00000036423	protein_coding	principal1	15	1	76710639	2093
ENSMUSG00000021567	protein_coding	Nkd2	ENSMUST00000221679	retained_intron		13	-1	73847611	447
ENSMUSG00000062296	protein_coding	Trank1	ENSMUST00000196945	processed_transcript		9	1	111374820	5546
ENSMUSG00000039701	protein_coding	Usp53	ENSMUST00000197358	retained_intron		3	-1	122963167	3407
ENSMUSG00000033728	protein_coding	Lrrc14	ENSMUST00000142610	nonsense_mediated_decay		15	1	76710643	1782
ENSMUSG00000062296	protein_coding	Trank1	ENSMUST00000198890	processed_transcript		9	1	111374883	835
ENSMUSG00000107540	processed_pseudogene	Gm43911	ENSMUST00000203097	processed_pseudogene		6	1	114053943	76
ENSMUSG00000039701	protein_coding	Usp53	ENSMUST00000200188	retained_intron		3	-1	122983893	1960
ENSMUSG00000062296	protein_coding	Trank1	ENSMUST00000200272	processed_transcript		9	1	111374888	750
ENSMUSG00000107474	processed_pseudogene	Gm43932	ENSMUST00000204499	processed_pseudogene		6	1	114062196	52
ENSMUSG00000062296	protein_coding	Trank1	ENSMUST00000197650	retained_intron		9	1	111386344	618
ENSMUSG00000033728	protein_coding	Lrrc14	ENSMUST00000137649	protein_coding	principal1	15	1	76710643	2832
ENSMUSG00000105478	TEC	Gm43285	ENSMUST00000196563	TEC		3	1	122995411	3592
ENSMUSG00000033728	protein_coding	Lrrc14	ENSMUST00000155225	protein_coding		15	1	76710649	420
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000112666	protein_coding	alternative2	X	1	151520672	2556
ENSMUSG00000105592	TEC	Gm42527	ENSMUST00000198173	TEC		9	1	111411434	1480
ENSMUSG00000033728	protein_coding	Lrrc14	ENSMUST00000154531	retained_intron		15	1	76710663	2544
ENSMUSG00000033728	protein_coding	Lrrc14	ENSMUST00000138132	processed_transcript		15	1	76710673	523
ENSMUSG00000079423	protein_coding	Gm3286	ENSMUST00000201629	protein_coding	principal3	5	1	95510758	1945
ENSMUSG00000033728	protein_coding	Lrrc14	ENSMUST00000142506	retained_intron		15	1	76710673	3943
ENSMUSG00000079423	protein_coding	Gm3286	ENSMUST00000200932	protein_coding	alternative2	5	1	95517357	2028
ENSMUSG00000079423	protein_coding	Gm3286	ENSMUST00000171752	protein_coding	principal3	5	1	95518668	1316
ENSMUSG00000033728	protein_coding	Lrrc14	ENSMUST00000155735	protein_coding	principal1	15	1	76710731	2286
ENSMUSG00000094043	protein_coding	Gm7971	ENSMUST00000086950	protein_coding	principal1	5	-1	95594875	1848
ENSMUSG00000085691	lincRNA	Gm14216	ENSMUST00000136046	lincRNA		2	-1	154723651	409
ENSMUSG00000085691	lincRNA	Gm14216	ENSMUST00000155334	lincRNA		2	-1	154738451	492
ENSMUSG00000032500	protein_coding	Dclk3	ENSMUST00000111879	protein_coding	principal1	9	1	111439081	3005
ENSMUSG00000106690	unprocessed_pseudogene	Gm6348	ENSMUST00000200751	unprocessed_pseudogene		5	1	95602578	1443
ENSMUSG00000098640	protein_coding	Gm14214	ENSMUST00000184654	protein_coding	principal1	2	-1	154769932	678
ENSMUSG00000107213	unprocessed_pseudogene	Gm3302	ENSMUST00000201462	unprocessed_pseudogene		5	1	95662305	1395
ENSMUSG00000106647	lincRNA	Gm42523	ENSMUST00000199378	lincRNA		9	-1	111548940	2872
ENSMUSG00000098640	protein_coding	Gm14214	ENSMUST00000185009	translated_processed_pseudogene		2	-1	154770030	776
ENSMUSG00000022994	protein_coding	Adcy6	ENSMUST00000096224	protein_coding	principal2	15	-1	98607633	6038
ENSMUSG00000108186	processed_pseudogene	Gm8132	ENSMUST00000204938	processed_pseudogene		6	-1	114169523	640
ENSMUSG00000022994	protein_coding	Adcy6	ENSMUST00000226236	retained_intron		15	-1	98596976	3963
ENSMUSG00000022994	protein_coding	Adcy6	ENSMUST00000228903	nonsense_mediated_decay		15	-1	98604826	4358
ENSMUSG00000111070	TEC	Gm47596	ENSMUST00000215148	TEC		9	-1	45112855	834
ENSMUSG00000022994	protein_coding	Adcy6	ENSMUST00000228566	protein_coding	alternative1	15	-1	98604731	3707
ENSMUSG00000022994	protein_coding	Adcy6	ENSMUST00000228596	processed_transcript		15	-1	98594234	326
ENSMUSG00000022994	protein_coding	Adcy6	ENSMUST00000227501	protein_coding		15	-1	98610076	612
ENSMUSG00000106232	antisense	Gm43236	ENSMUST00000197414	antisense		9	1	111561423	313
ENSMUSG00000022994	protein_coding	Adcy6	ENSMUST00000226500	protein_coding		15	-1	98610032	425
ENSMUSG00000030307	protein_coding	Slc6a11	ENSMUST00000032451	protein_coding	principal1	6	1	114131241	4132
ENSMUSG00000032502	protein_coding	Stac	ENSMUST00000161995	nonsense_mediated_decay		9	-1	111690225	2241
ENSMUSG00000030307	protein_coding	Slc6a11	ENSMUST00000203105	retained_intron		6	1	114131419	1017
ENSMUSG00000070304	protein_coding	Scn2b	ENSMUST00000170998	protein_coding	principal1	9	1	45117782	4656
ENSMUSG00000031349	protein_coding	Nsdhl	ENSMUST00000033715	protein_coding	principal1	X	1	72918557	2168
ENSMUSG00000097073	lincRNA	9430037G07Rik	ENSMUST00000180723	lincRNA		9	-1	88599243	3177
ENSMUSG00000031349	protein_coding	Nsdhl	ENSMUST00000155663	retained_intron		X	1	72929752	992
ENSMUSG00000070304	protein_coding	Scn2b	ENSMUST00000093855	protein_coding	principal1	9	1	45117881	3958
ENSMUSG00000097073	lincRNA	9430037G07Rik	ENSMUST00000180982	lincRNA		9	-1	88599516	2263
ENSMUSG00000096139	protein_coding	Gm7978	ENSMUST00000201129	protein_coding	principal1	5	-1	95736173	1897
ENSMUSG00000084944	lincRNA	Gm14684	ENSMUST00000145722	lincRNA		X	1	72981823	123
ENSMUSG00000099389	processed_pseudogene	Gm29603	ENSMUST00000186792	processed_pseudogene		9	1	88597410	334
ENSMUSG00000074385	lincRNA	Gm10684	ENSMUST00000098827	lincRNA		9	-1	45135606	2203
ENSMUSG00000096139	protein_coding	Gm7978	ENSMUST00000178552	protein_coding	principal1	5	-1	95734935	1446
ENSMUSG00000103967	TEC	Gm38214	ENSMUST00000192581	TEC		9	-1	88681926	988
ENSMUSG00000074385	lincRNA	Gm10684	ENSMUST00000217151	lincRNA		9	-1	45134832	779
ENSMUSG00000102533	TEC	Gm37226	ENSMUST00000191644	TEC		9	-1	88686186	3255
ENSMUSG00000032502	protein_coding	Stac	ENSMUST00000035083	protein_coding	principal1	9	-1	111690348	2644
ENSMUSG00000032502	protein_coding	Stac	ENSMUST00000162345	processed_transcript		9	-1	111690329	417
ENSMUSG00000111054	lincRNA	4930545L08Rik	ENSMUST00000215688	lincRNA		9	-1	111918666	566
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000112456	protein_coding	principal2	X	1	159627272	7317
ENSMUSG00000048534	protein_coding	Jaml	ENSMUST00000050020	protein_coding	principal1	9	1	45079183	2461
ENSMUSG00000048534	protein_coding	Jaml	ENSMUST00000216426	protein_coding		9	1	45079230	652
ENSMUSG00000074149	antisense	Gm10634	ENSMUST00000188891	antisense		9	1	88719629	2464
ENSMUSG00000074149	antisense	Gm10634	ENSMUST00000085257	antisense		9	1	88793462	702
ENSMUSG00000048534	protein_coding	Jaml	ENSMUST00000215880	protein_coding	principal1	9	1	45083946	1704
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000112670	protein_coding	alternative2	X	1	151521169	3484
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000080394	protein_coding		X	1	159708601	2980
ENSMUSG00000048534	protein_coding	Jaml	ENSMUST00000216333	processed_transcript		9	1	45086489	427
ENSMUSG00000099974	protein_coding	Bcl2a1d	ENSMUST00000098486	protein_coding	principal1	9	-1	88731914	863
ENSMUSG00000048534	protein_coding	Jaml	ENSMUST00000217074	protein_coding		9	1	45102794	589
ENSMUSG00000048534	protein_coding	Jaml	ENSMUST00000215266	retained_intron		9	1	45102974	477
ENSMUSG00000103165	TEC	Gm37560	ENSMUST00000194289	TEC		9	1	88731998	1000
ENSMUSG00000048534	protein_coding	Jaml	ENSMUST00000215098	retained_intron		9	1	45103860	489
ENSMUSG00000079427	protein_coding	Mthfsl	ENSMUST00000113110	protein_coding	principal1	9	-1	88719813	801
ENSMUSG00000079427	protein_coding	Mthfsl	ENSMUST00000185519	processed_transcript		9	-1	88716210	1103
ENSMUSG00000079427	protein_coding	Mthfsl	ENSMUST00000186721	processed_transcript		9	-1	88719581	473
ENSMUSG00000079427	protein_coding	Mthfsl	ENSMUST00000186863	protein_coding		9	-1	88719587	725
ENSMUSG00000079427	protein_coding	Mthfsl	ENSMUST00000190027	processed_transcript		9	-1	88719570	616
ENSMUSG00000079427	protein_coding	Mthfsl	ENSMUST00000191235	processed_transcript		9	-1	88720296	564
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000046962	protein_coding	principal3	X	1	151521181	3105
ENSMUSG00000079427	protein_coding	Mthfsl	ENSMUST00000186975	retained_intron		9	-1	88716060	3188
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000112668	protein_coding	alternative2	X	1	151521187	2291
ENSMUSG00000103837	TEC	Gm37614	ENSMUST00000195645	TEC		9	-1	88826813	210
ENSMUSG00000024759	protein_coding	Atl3	ENSMUST00000170373	protein_coding		19	1	7494040	7540
ENSMUSG00000101698	lincRNA	Gm29562	ENSMUST00000190113	lincRNA		9	1	88827522	904
ENSMUSG00000024759	protein_coding	Atl3	ENSMUST00000236308	protein_coding		19	1	7494053	1180
ENSMUSG00000024759	protein_coding	Atl3	ENSMUST00000235557	protein_coding		19	1	7494095	348
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000046950	protein_coding	alternative2	X	1	151521187	5728
ENSMUSG00000024759	protein_coding	Atl3	ENSMUST00000237998	protein_coding		19	1	7494195	437
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000148622	protein_coding		X	1	151522360	573
ENSMUSG00000024759	protein_coding	Atl3	ENSMUST00000235260	retained_intron		19	1	7494398	1091
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000141715	retained_intron		X	1	151554260	572
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000151941	protein_coding		X	1	151566037	516
ENSMUSG00000024759	protein_coding	Atl3	ENSMUST00000025668	protein_coding	principal1	19	1	7494438	4368
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000138318	retained_intron		X	1	151629817	3191
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000112662	protein_coding	principal3	X	1	151520672	3732
ENSMUSG00000041229	protein_coding	Phf8	ENSMUST00000168501	protein_coding	alternative2	X	1	151520672	6359
ENSMUSG00000024759	protein_coding	Atl3	ENSMUST00000236382	nonsense_mediated_decay		19	1	7494535	3342
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000141354	nonsense_mediated_decay		X	1	159708601	2681
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000073094	protein_coding	alternative1	X	1	159627541	2280
ENSMUSG00000101865	processed_pseudogene	Gm9775	ENSMUST00000189402	processed_pseudogene		9	1	88856756	331
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000150433	retained_intron		X	1	159627541	2745
ENSMUSG00000061524	protein_coding	Zic2	ENSMUST00000075888	protein_coding	principal1	14	1	122475435	2440
ENSMUSG00000061524	protein_coding	Zic2	ENSMUST00000137059	retained_intron		14	1	122478100	765
ENSMUSG00000097177	processed_transcript	9330159M07Rik	ENSMUST00000188156	antisense		9	-1	88858866	737
ENSMUSG00000097177	processed_transcript	9330159M07Rik	ENSMUST00000180712	antisense		9	-1	88858853	2702
ENSMUSG00000097177	processed_transcript	9330159M07Rik	ENSMUST00000180783	antisense		9	-1	88858801	1044
ENSMUSG00000097177	processed_transcript	9330159M07Rik	ENSMUST00000188198	retained_intron		9	-1	88858862	2265
ENSMUSG00000097177	processed_transcript	9330159M07Rik	ENSMUST00000181448	antisense		9	-1	88858870	602
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000112447	processed_transcript		X	1	159840964	4245
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000112451	protein_coding		X	1	159840468	3914
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000112453	protein_coding		X	1	159840481	2515
ENSMUSG00000067399	protein_coding	Trim43c	ENSMUST00000186363	protein_coding	alternative2	9	1	88839309	1836
ENSMUSG00000031351	protein_coding	Zfp185	ENSMUST00000114546	protein_coding	alternative2	X	1	72987360	3533
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000128185	processed_transcript		X	1	159942693	3847
ENSMUSG00000031351	protein_coding	Zfp185	ENSMUST00000134588	protein_coding		X	1	72988253	352
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000142426	processed_transcript		X	1	159942912	1986
ENSMUSG00000067399	protein_coding	Trim43c	ENSMUST00000163255	protein_coding	principal2	9	1	88839164	1990
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000134062	processed_transcript		X	1	159941697	799
ENSMUSG00000016763	protein_coding	Scube1	ENSMUST00000144773	retained_intron		15	-1	83725021	5840
ENSMUSG00000001964	protein_coding	Emd	ENSMUST00000002029	protein_coding	principal1	X	1	74254687	1595
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000123433	protein_coding		X	1	159697316	799
ENSMUSG00000001964	protein_coding	Emd	ENSMUST00000096424	protein_coding		X	1	74254752	896
ENSMUSG00000031351	protein_coding	Zfp185	ENSMUST00000164800	protein_coding	principal3	X	1	72987339	3557
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000152426	protein_coding		X	1	159919859	783
ENSMUSG00000001964	protein_coding	Emd	ENSMUST00000129516	processed_transcript		X	1	74254761	614
ENSMUSG00000040990	protein_coding	Sh3kbp1	ENSMUST00000130987	processed_transcript		X	1	159943018	666
ENSMUSG00000001964	protein_coding	Emd	ENSMUST00000119197	protein_coding		X	1	74254810	768
ENSMUSG00000001964	protein_coding	Emd	ENSMUST00000152288	nonsense_mediated_decay		X	1	74254816	873
ENSMUSG00000001964	protein_coding	Emd	ENSMUST00000088313	protein_coding		X	1	74254830	1338
ENSMUSG00000081375	transcribed_processed_pseudogene	Gm14686	ENSMUST00000119926	transcribed_processed_pseudogene		X	1	74261032	343
ENSMUSG00000003352	protein_coding	Cacnb3	ENSMUST00000229223	processed_transcript		15	1	98630840	346
ENSMUSG00000003352	protein_coding	Cacnb3	ENSMUST00000230769	processed_transcript		15	1	98631805	346
ENSMUSG00000083393	processed_pseudogene	Gm15194	ENSMUST00000120453	processed_pseudogene		X	-1	160020723	434
ENSMUSG00000082810	processed_pseudogene	Gm8682	ENSMUST00000121310	processed_pseudogene		X	1	160036321	498
ENSMUSG00000031299	protein_coding	Pdha1	ENSMUST00000033662	protein_coding	principal1	X	-1	160138413	2848
ENSMUSG00000013698	protein_coding	Pea15a	ENSMUST00000013842	protein_coding	principal1	1	-1	172206804	2501
ENSMUSG00000031299	protein_coding	Pdha1	ENSMUST00000156531	retained_intron		X	-1	160128965	729
ENSMUSG00000013698	protein_coding	Pea15a	ENSMUST00000111247	protein_coding		1	-1	172206804	2435
ENSMUSG00000031299	protein_coding	Pdha1	ENSMUST00000126440	retained_intron		X	-1	160138309	629
ENSMUSG00000031299	protein_coding	Pdha1	ENSMUST00000127535	processed_transcript		X	-1	160138356	457
ENSMUSG00000013698	protein_coding	Pea15a	ENSMUST00000125361	processed_transcript		1	-1	172199815	980
ENSMUSG00000013698	protein_coding	Pea15a	ENSMUST00000155109	protein_coding		1	-1	172206697	600
ENSMUSG00000013698	protein_coding	Pea15a	ENSMUST00000152432	retained_intron		1	-1	172206804	1015
ENSMUSG00000003352	protein_coding	Cacnb3	ENSMUST00000109150	protein_coding	alternative1	15	1	98632376	2513
ENSMUSG00000003352	protein_coding	Cacnb3	ENSMUST00000229282	processed_transcript		15	1	98632381	376
ENSMUSG00000031303	protein_coding	Map3k15	ENSMUST00000033665	protein_coding	principal1	X	1	159988433	4348
ENSMUSG00000003352	protein_coding	Cacnb3	ENSMUST00000003442	protein_coding		15	1	98634767	2734
ENSMUSG00000003352	protein_coding	Cacnb3	ENSMUST00000230490	protein_coding	principal3	15	1	98635105	2477
ENSMUSG00000003352	protein_coding	Cacnb3	ENSMUST00000230064	retained_intron		15	1	98639489	2714
ENSMUSG00000097677	lincRNA	Gm26611	ENSMUST00000181449	lincRNA		9	1	88859011	785
ENSMUSG00000099930	processed_transcript	Gm2396	ENSMUST00000188232	lincRNA		9	-1	88937342	3433
ENSMUSG00000099930	processed_transcript	Gm2396	ENSMUST00000185501	retained_intron		9	-1	88922621	5682
ENSMUSG00000102037	protein_coding	Bcl2a1a	ENSMUST00000098485	protein_coding	principal1	9	1	88956900	819
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000193638	nonsense_mediated_decay		1	1	172148084	2253
ENSMUSG00000103581	TEC	Gm37833	ENSMUST00000194342	TEC		9	1	88980921	3256
ENSMUSG00000016763	protein_coding	Scube1	ENSMUST00000043634	protein_coding		15	-1	83725021	5161
ENSMUSG00000103336	TEC	Gm37993	ENSMUST00000195301	TEC		9	1	88985191	988
ENSMUSG00000100602	processed_pseudogene	Gm19498	ENSMUST00000191128	processed_pseudogene		9	-1	89076342	331
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000195394	retained_intron		1	1	172148089	2584
ENSMUSG00000016763	protein_coding	Scube1	ENSMUST00000076060	protein_coding		15	-1	83725021	3913
ENSMUSG00000005823	protein_coding	Gpr108	ENSMUST00000233568	protein_coding	principal2	17	-1	57247672	2405
ENSMUSG00000016763	protein_coding	Scube1	ENSMUST00000016907	protein_coding	principal1	15	-1	83725021	3991
ENSMUSG00000016763	protein_coding	Scube1	ENSMUST00000230060	retained_intron		15	-1	83613739	1742
ENSMUSG00000016763	protein_coding	Scube1	ENSMUST00000171496	protein_coding		15	-1	83724926	2989
ENSMUSG00000005823	protein_coding	Gpr108	ENSMUST00000232778	retained_intron		17	-1	57247663	2166
ENSMUSG00000005823	protein_coding	Gpr108	ENSMUST00000005975	protein_coding	alternative2	17	-1	57247689	2064
ENSMUSG00000016763	protein_coding	Scube1	ENSMUST00000229057	retained_intron		15	-1	83660480	3891
ENSMUSG00000035900	protein_coding	Gramd4	ENSMUST00000088931	protein_coding	principal1	15	1	86057695	4115
ENSMUSG00000005823	protein_coding	Gpr108	ENSMUST00000233492	processed_transcript		17	-1	57248446	716
ENSMUSG00000079162	protein_coding	Trim43b	ENSMUST00000189557	protein_coding	alternative2	9	-1	89092690	1826
ENSMUSG00000035900	protein_coding	Gramd4	ENSMUST00000138134	protein_coding		15	1	86058727	4292
ENSMUSG00000075465	lincRNA	Gm10837	ENSMUST00000100294	lincRNA		14	1	122490586	1536
ENSMUSG00000079162	protein_coding	Trim43b	ENSMUST00000167113	protein_coding	principal2	9	-1	89092835	2262
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000191689	protein_coding	principal1	1	1	172148118	2754
ENSMUSG00000035900	protein_coding	Gramd4	ENSMUST00000123349	nonsense_mediated_decay		15	1	86058872	4861
ENSMUSG00000093669	processed_pseudogene	Gm9399	ENSMUST00000175771	processed_pseudogene		14	-1	122495251	639
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000195011	retained_intron		1	1	172148140	2282
ENSMUSG00000035900	protein_coding	Gramd4	ENSMUST00000147286	processed_transcript		15	1	86074733	374
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000192704	protein_coding	principal1	1	1	172148142	2859
ENSMUSG00000115652	processed_pseudogene	Gm18143	ENSMUST00000228120	processed_pseudogene		14	-1	122513829	391
ENSMUSG00000035900	protein_coding	Gramd4	ENSMUST00000123474	processed_transcript		15	1	86067813	597
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000074144	protein_coding	principal1	1	1	172148178	4656
ENSMUSG00000089680	antisense	Gm15722	ENSMUST00000159271	antisense		15	-1	86090060	661
ENSMUSG00000082342	processed_pseudogene	Gm5395	ENSMUST00000121650	processed_pseudogene		X	1	151655188	915
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000192031	retained_intron		1	1	172148948	3353
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000194972	retained_intron		1	1	172173954	900
ENSMUSG00000082500	processed_pseudogene	Gm15195	ENSMUST00000118775	processed_pseudogene		X	-1	160269963	263
ENSMUSG00000081331	processed_pseudogene	Gm15151	ENSMUST00000117106	processed_pseudogene		X	-1	151758193	177
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000195345	nonsense_mediated_decay		1	1	172174058	598
ENSMUSG00000083318	unprocessed_pseudogene	Gm15192	ENSMUST00000121005	unprocessed_pseudogene		X	1	160298478	293
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000192428	retained_intron		1	1	172178537	4537
ENSMUSG00000083379	processed_pseudogene	Gm4919	ENSMUST00000117825	processed_pseudogene		X	-1	151762658	604
ENSMUSG00000026554	protein_coding	Dcaf8	ENSMUST00000191891	protein_coding		1	1	172187381	571
ENSMUSG00000083516	processed_pseudogene	Gm15196	ENSMUST00000121406	processed_pseudogene		X	-1	160309488	482
ENSMUSG00000083719	processed_pseudogene	Gm15161	ENSMUST00000117340	processed_pseudogene		X	1	151783522	387
ENSMUSG00000081536	processed_pseudogene	Gm15193	ENSMUST00000120224	processed_pseudogene		X	-1	160347733	865
ENSMUSG00000074146	lincRNA	4930579C12Rik	ENSMUST00000187015	lincRNA		9	-1	89177887	3676
ENSMUSG00000074146	lincRNA	4930579C12Rik	ENSMUST00000098484	lincRNA		9	-1	89177813	768
ENSMUSG00000050424	protein_coding	Pnma5	ENSMUST00000152209	protein_coding		X	-1	73036103	1280
ENSMUSG00000050424	protein_coding	Pnma5	ENSMUST00000051569	protein_coding	principal1	X	-1	73037103	2785
ENSMUSG00000050424	protein_coding	Pnma5	ENSMUST00000114540	protein_coding	principal1	X	-1	73037103	2287
ENSMUSG00000109025	unprocessed_pseudogene	Gm6858	ENSMUST00000208582	unprocessed_pseudogene		X	1	73050006	1468
ENSMUSG00000046287	protein_coding	Pnma3	ENSMUST00000060418	protein_coding	principal1	X	1	73064787	3405
ENSMUSG00000035891	protein_coding	Cerk	ENSMUST00000044332	protein_coding	principal1	15	-1	86186141	4518
ENSMUSG00000089929	protein_coding	Bcl2a1b	ENSMUST00000068569	protein_coding	principal1	9	1	89199209	817
ENSMUSG00000035891	protein_coding	Cerk	ENSMUST00000156546	protein_coding		15	-1	86152448	2162
ENSMUSG00000103247	TEC	Gm38091	ENSMUST00000192418	TEC		9	-1	89263395	3871
ENSMUSG00000035891	protein_coding	Cerk	ENSMUST00000150767	retained_intron		15	-1	86159468	3896
ENSMUSG00000086424	antisense	Gm15569	ENSMUST00000133675	antisense		15	1	86185728	594
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000127438	processed_transcript		9	1	89210676	765
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000118870	protein_coding		9	1	89211157	705
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000085256	protein_coding	principal1	9	1	89211157	816
ENSMUSG00000085932	antisense	Gm15556	ENSMUST00000122904	antisense		17	1	47922378	663
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000117314	processed_transcript		9	1	89211383	705
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000118887	processed_transcript		9	1	89211384	1468
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000144930	processed_transcript		9	1	89211386	481
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000149688	processed_transcript		9	1	89211400	415
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000186009	processed_transcript		9	1	89211404	3971
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000187362	processed_transcript		9	1	89211411	1406
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000127868	processed_transcript		9	1	89214946	655
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000185894	protein_coding		9	1	89215391	353
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000147644	processed_transcript		9	1	89218454	393
ENSMUSG00000066442	protein_coding	Mthfs	ENSMUST00000209568	processed_transcript		9	1	89332816	208
ENSMUSG00000100838	protein_coding	Gm29094	ENSMUST00000138109	protein_coding	principal1	9	1	89199379	664
ENSMUSG00000051864	protein_coding	Tbc1d22a	ENSMUST00000063414	protein_coding	principal1	15	1	86214459	3229
ENSMUSG00000051864	protein_coding	Tbc1d22a	ENSMUST00000229242	protein_coding		15	1	86235505	736
ENSMUSG00000115918	antisense	A930001M01Rik	ENSMUST00000229286	antisense		15	-1	86475095	672
ENSMUSG00000115918	antisense	A930001M01Rik	ENSMUST00000229685	antisense		15	-1	86475098	4961
ENSMUSG00000116040	lincRNA	Gm49464	ENSMUST00000229409	lincRNA		15	1	86704291	237
ENSMUSG00000116303	processed_pseudogene	Gm49465	ENSMUST00000230648	processed_pseudogene		15	1	86726495	265
ENSMUSG00000003360	protein_coding	Ddx23	ENSMUST00000003450	protein_coding	principal1	15	-1	98662889	3187
ENSMUSG00000116171	lincRNA	4930543I03Rik	ENSMUST00000230110	lincRNA		15	1	86737826	729
ENSMUSG00000115957	lincRNA	Gm49466	ENSMUST00000229974	lincRNA		15	-1	86924082	446
ENSMUSG00000115866	processed_pseudogene	Gm49467	ENSMUST00000229572	processed_pseudogene		15	1	86939107	390
ENSMUSG00000116296	lincRNA	Gm49468	ENSMUST00000229029	lincRNA		15	1	86990519	790
ENSMUSG00000003360	protein_coding	Ddx23	ENSMUST00000160506	retained_intron		15	-1	98662884	3093
ENSMUSG00000003360	protein_coding	Ddx23	ENSMUST00000159423	retained_intron		15	-1	98662881	3411
ENSMUSG00000111825	lincRNA	Gm10646	ENSMUST00000213227	lincRNA		9	1	67102300	3293
ENSMUSG00000003360	protein_coding	Ddx23	ENSMUST00000161030	retained_intron		15	-1	98662884	793
ENSMUSG00000003360	protein_coding	Ddx23	ENSMUST00000162384	protein_coding		15	-1	98662858	321
ENSMUSG00000116353	lincRNA	Gm49469	ENSMUST00000229368	lincRNA		15	1	87097532	394
ENSMUSG00000003360	protein_coding	Ddx23	ENSMUST00000159170	retained_intron		15	-1	98662889	610
ENSMUSG00000003360	protein_coding	Ddx23	ENSMUST00000228973	retained_intron		15	-1	98662894	889
ENSMUSG00000116229	lincRNA	Gm49470	ENSMUST00000230746	lincRNA		15	1	87139086	749
ENSMUSG00000111806	lincRNA	Gm47403	ENSMUST00000217127	lincRNA		9	-1	89560384	2728
ENSMUSG00000115930	lincRNA	A930027H12Rik	ENSMUST00000229090	lincRNA		15	1	87243550	933
ENSMUSG00000111556	lincRNA	Gm19299	ENSMUST00000215645	lincRNA		9	1	67133560	469
ENSMUSG00000111556	lincRNA	Gm19299	ENSMUST00000215724	lincRNA		9	1	67133561	1435
ENSMUSG00000039313	protein_coding	Minar1	ENSMUST00000044491	protein_coding	principal1	9	-1	89623125	7202
ENSMUSG00000039313	protein_coding	Minar1	ENSMUST00000191465	nonsense_mediated_decay		9	-1	89603391	2871
ENSMUSG00000111274	lincRNA	Gm47409	ENSMUST00000214211	lincRNA		9	1	89638072	633
ENSMUSG00000054863	protein_coding	Tafa5	ENSMUST00000230414	protein_coding	principal1	15	1	87544299	2649
ENSMUSG00000054863	protein_coding	Tafa5	ENSMUST00000068088	protein_coding		15	1	87625230	2603
ENSMUSG00000116061	lincRNA	Gm49472	ENSMUST00000230713	lincRNA		15	1	87967416	359
ENSMUSG00000116061	lincRNA	Gm49472	ENSMUST00000229118	lincRNA		15	1	87967569	757
ENSMUSG00000116350	lincRNA	Gm35772	ENSMUST00000230760	lincRNA		15	1	88073744	301
ENSMUSG00000115880	lincRNA	4930445N06Rik	ENSMUST00000229875	lincRNA		15	-1	88315632	392
ENSMUSG00000115880	lincRNA	4930445N06Rik	ENSMUST00000230151	lincRNA		15	-1	88315632	625
ENSMUSG00000116331	lincRNA	B230214G05Rik	ENSMUST00000230919	lincRNA		15	1	88314874	2780
ENSMUSG00000054117	protein_coding	Zdhhc25	ENSMUST00000066949	protein_coding	principal1	15	1	88600302	1368
ENSMUSG00000054855	protein_coding	Rnd1	ENSMUST00000109149	protein_coding		15	-1	98677460	1034
ENSMUSG00000054855	protein_coding	Rnd1	ENSMUST00000003451	protein_coding	principal1	15	-1	98677461	2203
ENSMUSG00000054855	protein_coding	Rnd1	ENSMUST00000120997	protein_coding		15	-1	98677458	856
ENSMUSG00000111569	processed_pseudogene	Gm47410	ENSMUST00000215251	processed_pseudogene		9	-1	89668471	1199
ENSMUSG00000116482	lincRNA	Gm34152	ENSMUST00000230172	lincRNA		15	-1	98696191	517
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000028749	protein_coding	principal3	2	1	120463572	3186
ENSMUSG00000032353	protein_coding	Tmed3	ENSMUST00000058488	protein_coding	principal1	9	-1	89705068	1346
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000110721	protein_coding	alternative1	2	1	120463575	2488
ENSMUSG00000032353	protein_coding	Tmed3	ENSMUST00000188808	retained_intron		9	-1	89704823	1579
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000239364	protein_coding		2	1	120463653	3012
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000239355	retained_intron		2	1	120463962	957
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000110716	protein_coding		2	1	120476909	2764
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000028748	protein_coding		2	1	120476909	2622
ENSMUSG00000047606	protein_coding	Ankrd34c	ENSMUST00000060700	protein_coding	principal1	9	-1	89738445	5457
ENSMUSG00000047606	protein_coding	Ankrd34c	ENSMUST00000185470	protein_coding	principal1	9	-1	89738475	2475
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000090028	protein_coding		2	1	120476970	2639
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000110719	protein_coding		2	1	120476976	2776
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000151924	processed_transcript		2	1	120484351	215
ENSMUSG00000100523	processed_pseudogene	Gm29608	ENSMUST00000190444	processed_pseudogene		9	1	89759003	463
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000139336	processed_transcript		2	1	120491427	1589
ENSMUSG00000098727	lincRNA	1700017I07Rik	ENSMUST00000184823	lincRNA		9	1	89802870	462
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000239291	nonsense_mediated_decay		2	1	120494793	1624
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000125238	protein_coding		2	1	120500242	1155
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000141181	protein_coding		2	1	120501229	1367
ENSMUSG00000079110	protein_coding	Capn3	ENSMUST00000151342	protein_coding		2	1	120501303	693
ENSMUSG00000003354	protein_coding	Ccdc65	ENSMUST00000003444	protein_coding	principal1	15	1	98708207	1900
ENSMUSG00000003354	protein_coding	Ccdc65	ENSMUST00000229471	protein_coding		15	1	98708231	566
ENSMUSG00000098627	lincRNA	4930524O08Rik	ENSMUST00000183387	lincRNA		9	1	89826519	1451
ENSMUSG00000098627	lincRNA	4930524O08Rik	ENSMUST00000184444	lincRNA		9	1	89826944	2719
ENSMUSG00000111412	antisense	Gm47047	ENSMUST00000216972	antisense		9	1	67424503	2401
ENSMUSG00000098627	lincRNA	4930524O08Rik	ENSMUST00000184759	lincRNA		9	1	89826982	856
ENSMUSG00000003355	protein_coding	Fkbp11	ENSMUST00000230743	retained_intron		15	-1	98728152	1314
ENSMUSG00000003355	protein_coding	Fkbp11	ENSMUST00000003445	protein_coding	principal1	15	-1	98728198	734
ENSMUSG00000003355	protein_coding	Fkbp11	ENSMUST00000229562	retained_intron		15	-1	98728140	2411
ENSMUSG00000051853	protein_coding	Arf3	ENSMUST00000053183	protein_coding	principal1	15	-1	98763211	4566
ENSMUSG00000051853	protein_coding	Arf3	ENSMUST00000129354	processed_transcript		15	-1	98763214	405
ENSMUSG00000051853	protein_coding	Arf3	ENSMUST00000156572	protein_coding		15	-1	98762992	505
ENSMUSG00000032356	protein_coding	Rasgrf1	ENSMUST00000189545	protein_coding		9	1	89909908	4766
ENSMUSG00000032356	protein_coding	Rasgrf1	ENSMUST00000034909	protein_coding		9	1	89909909	853
ENSMUSG00000032356	protein_coding	Rasgrf1	ENSMUST00000034912	protein_coding	principal1	9	1	89909909	4092
ENSMUSG00000032356	protein_coding	Rasgrf1	ENSMUST00000190073	retained_intron		9	1	89909912	3042
ENSMUSG00000052698	protein_coding	Tln2	ENSMUST00000217550	protein_coding		9	-1	67330647	5152
ENSMUSG00000052698	protein_coding	Tln2	ENSMUST00000214859	protein_coding		9	-1	67296443	3251
ENSMUSG00000100060	processed_pseudogene	Gm17944	ENSMUST00000186351	processed_pseudogene		9	1	90033243	643
ENSMUSG00000022996	protein_coding	Wnt10b	ENSMUST00000228546	protein_coding		15	-1	98778143	2709
ENSMUSG00000033808	protein_coding	Tmem87a	ENSMUST00000090042	protein_coding	alternative2	2	-1	120404069	2874
ENSMUSG00000033808	protein_coding	Tmem87a	ENSMUST00000090046	protein_coding	principal4	2	-1	120404089	2897
ENSMUSG00000040472	protein_coding	Rabggta	ENSMUST00000227061	protein_coding	principal1	14	-1	55722202	2882
ENSMUSG00000022996	protein_coding	Wnt10b	ENSMUST00000226610	protein_coding	principal1	15	-1	98778150	2217
ENSMUSG00000040472	protein_coding	Rabggta	ENSMUST00000169237	protein_coding	principal1	14	-1	55722176	2547
ENSMUSG00000033808	protein_coding	Tmem87a	ENSMUST00000136410	processed_transcript		2	-1	120404095	2822
ENSMUSG00000033808	protein_coding	Tmem87a	ENSMUST00000124806	processed_transcript		2	-1	120404077	2160
ENSMUSG00000022996	protein_coding	Wnt10b	ENSMUST00000226655	protein_coding		15	-1	98778126	1807
ENSMUSG00000033808	protein_coding	Tmem87a	ENSMUST00000110729	protein_coding	alternative2	2	-1	120404078	1578
ENSMUSG00000022996	protein_coding	Wnt10b	ENSMUST00000166022	protein_coding	principal1	15	-1	98777261	1594
ENSMUSG00000033808	protein_coding	Tmem87a	ENSMUST00000151740	processed_transcript		2	-1	120404113	615
ENSMUSG00000022996	protein_coding	Wnt10b	ENSMUST00000228594	protein_coding	principal1	15	-1	98777029	1510
ENSMUSG00000033808	protein_coding	Tmem87a	ENSMUST00000143182	retained_intron		2	-1	120404081	5125
ENSMUSG00000022996	protein_coding	Wnt10b	ENSMUST00000226846	protein_coding		15	-1	98777029	1204
ENSMUSG00000052698	protein_coding	Tln2	ENSMUST00000215784	protein_coding	alternative1	9	-1	67539615	8330
ENSMUSG00000022996	protein_coding	Wnt10b	ENSMUST00000023732	protein_coding	principal1	15	-1	98778150	2226
ENSMUSG00000052698	protein_coding	Tln2	ENSMUST00000215267	protein_coding		9	-1	67327664	4999
ENSMUSG00000118623	protein_coding	AL935121.1	ENSMUST00000145993	nonsense_mediated_decay	principal1	2	1	120456019	2541
ENSMUSG00000052698	protein_coding	Tln2	ENSMUST00000216799	retained_intron		9	-1	67231407	3365
ENSMUSG00000052698	protein_coding	Tln2	ENSMUST00000215593	processed_transcript		9	-1	67262093	3161
ENSMUSG00000022997	protein_coding	Wnt1	ENSMUST00000023734	protein_coding	principal1	15	1	98789857	2378
ENSMUSG00000118623	protein_coding	AL935121.1	ENSMUST00000124129	nonsense_mediated_decay	principal1	2	1	120456019	2894
ENSMUSG00000052698	protein_coding	Tln2	ENSMUST00000213584	protein_coding		9	-1	67428803	582
ENSMUSG00000052698	protein_coding	Tln2	ENSMUST00000039662	protein_coding	principal2	9	-1	67539392	8052
ENSMUSG00000052698	protein_coding	Tln2	ENSMUST00000040025	protein_coding	principal2	9	-1	67559703	12132
ENSMUSG00000116669	processed_pseudogene	Gm49570	ENSMUST00000232085	processed_pseudogene		16	1	86015455	403
ENSMUSG00000056148	protein_coding	Rdh9	ENSMUST00000128133	processed_transcript		10	1	127776386	449
ENSMUSG00000056148	protein_coding	Rdh9	ENSMUST00000136223	protein_coding		10	1	127776395	1276
ENSMUSG00000040472	protein_coding	Rabggta	ENSMUST00000062861	protein_coding		14	-1	55722176	2338
ENSMUSG00000056148	protein_coding	Rdh9	ENSMUST00000052652	protein_coding	principal1	10	1	127776405	2698
ENSMUSG00000099009	protein_coding	Rdh16f1	ENSMUST00000128247	protein_coding	principal1	10	1	127759787	2766
ENSMUSG00000089789	protein_coding	Rdh1	ENSMUST00000073639	protein_coding	principal1	10	1	127759721	3930
ENSMUSG00000059213	protein_coding	Ddn	ENSMUST00000075444	protein_coding	principal1	15	-1	98807925	3745
ENSMUSG00000116556	lincRNA	1700007H22Rik	ENSMUST00000231250	lincRNA		16	-1	86150676	537
ENSMUSG00000059213	protein_coding	Ddn	ENSMUST00000230409	protein_coding		15	-1	98809490	368
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000205379	protein_coding		9	1	65908924	4001
ENSMUSG00000094819	protein_coding	Olfr53	ENSMUST00000084456	protein_coding	principal1	7	1	140646452	1328
ENSMUSG00000094819	protein_coding	Olfr53	ENSMUST00000211057	protein_coding		7	1	140646462	516
ENSMUSG00000094819	protein_coding	Olfr53	ENSMUST00000211399	protein_coding		7	1	140646513	504
ENSMUSG00000116799	lincRNA	Gm32357	ENSMUST00000231827	lincRNA		16	1	86236171	475
ENSMUSG00000116906	processed_pseudogene	Gm49572	ENSMUST00000232053	processed_pseudogene		16	1	86758899	478
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000146069	retained_intron		9	1	65908974	3087
ENSMUSG00000109892	unprocessed_pseudogene	Olfr540-ps1	ENSMUST00000210499	unprocessed_pseudogene		7	-1	140669737	612
ENSMUSG00000040472	protein_coding	Rabggta	ENSMUST00000228826	retained_intron		14	-1	55722176	2492
ENSMUSG00000059136	protein_coding	Olfr539	ENSMUST00000219579	processed_transcript		7	1	140659930	517
ENSMUSG00000040472	protein_coding	Rabggta	ENSMUST00000228604	retained_intron		14	-1	55722176	2435
ENSMUSG00000059136	protein_coding	Olfr539	ENSMUST00000219853	processed_transcript		7	1	140659930	416
ENSMUSG00000067713	protein_coding	Prkag1	ENSMUST00000168846	protein_coding	principal1	15	-1	98831521	1652
ENSMUSG00000059136	protein_coding	Olfr539	ENSMUST00000218865	protein_coding	alternative2	7	1	140659930	11486
ENSMUSG00000040472	protein_coding	Rabggta	ENSMUST00000228899	retained_intron		14	-1	55722181	2153
ENSMUSG00000059136	protein_coding	Olfr539	ENSMUST00000078967	protein_coding	principal2	7	1	140667289	960
ENSMUSG00000067713	protein_coding	Prkag1	ENSMUST00000229544	retained_intron		15	-1	98815711	862
ENSMUSG00000116993	lincRNA	Gm32461	ENSMUST00000231875	lincRNA		16	-1	86806513	782
ENSMUSG00000040472	protein_coding	Rabggta	ENSMUST00000163889	protein_coding	principal1	14	-1	55722263	1886
ENSMUSG00000116993	lincRNA	Gm32461	ENSMUST00000232333	lincRNA		16	-1	86806364	1449
ENSMUSG00000067713	protein_coding	Prkag1	ENSMUST00000230560	protein_coding		15	-1	98830971	814
ENSMUSG00000067713	protein_coding	Prkag1	ENSMUST00000229297	protein_coding		15	-1	98826128	578
ENSMUSG00000040472	protein_coding	Rabggta	ENSMUST00000226209	retained_intron		14	-1	55719146	514
ENSMUSG00000067713	protein_coding	Prkag1	ENSMUST00000229346	retained_intron		15	-1	98831454	507
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000206048	protein_coding		9	1	65908977	2073
ENSMUSG00000040472	protein_coding	Rabggta	ENSMUST00000227617	retained_intron		14	-1	55720133	718
ENSMUSG00000067713	protein_coding	Prkag1	ENSMUST00000229853	retained_intron		15	-1	98831488	384
ENSMUSG00000116810	lincRNA	Gm32624	ENSMUST00000231555	lincRNA		16	1	86816866	915
ENSMUSG00000040472	protein_coding	Rabggta	ENSMUST00000227132	retained_intron		14	-1	55722257	476
ENSMUSG00000116810	lincRNA	Gm32624	ENSMUST00000231758	lincRNA		16	1	86816874	2097
ENSMUSG00000097414	antisense	B130046B21Rik	ENSMUST00000181510	antisense		15	1	98807024	2224
ENSMUSG00000097414	antisense	B130046B21Rik	ENSMUST00000229573	antisense		15	1	98807025	334
ENSMUSG00000097414	antisense	B130046B21Rik	ENSMUST00000230113	antisense		15	1	98813328	411
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000034949	protein_coding	principal1	9	1	65908986	7208
ENSMUSG00000022387	protein_coding	Brd1	ENSMUST00000109381	protein_coding	principal2	15	-1	88734233	5152
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000207167	nonsense_mediated_decay		9	1	65909014	812
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000154589	protein_coding		9	1	65909020	552
ENSMUSG00000022387	protein_coding	Brd1	ENSMUST00000109380	protein_coding	alternative1	15	-1	88730771	3259
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000124688	retained_intron		9	1	65909030	2771
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000206594	protein_coding	principal1	9	1	65909088	2482
ENSMUSG00000022387	protein_coding	Brd1	ENSMUST00000150004	processed_transcript		15	-1	88700864	721
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000117849	protein_coding		9	1	65909439	5173
ENSMUSG00000022387	protein_coding	Brd1	ENSMUST00000088911	retained_intron		15	-1	88734230	4702
ENSMUSG00000022387	protein_coding	Brd1	ENSMUST00000156155	processed_transcript		15	-1	88719155	628
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000130798	protein_coding		9	1	65924235	1648
ENSMUSG00000022387	protein_coding	Brd1	ENSMUST00000139515	processed_transcript		15	-1	88717040	720
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000206528	protein_coding		9	1	65958355	1740
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000208011	nonsense_mediated_decay		9	1	65958416	791
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000205884	nonsense_mediated_decay		9	1	66007740	742
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000153391	retained_intron		9	1	66010063	505
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000206969	protein_coding		9	1	66010087	713
ENSMUSG00000028116	protein_coding	Myoz2	ENSMUST00000029761	protein_coding	principal1	3	-1	123035015	1181
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000136773	protein_coding		9	1	66010430	612
ENSMUSG00000032384	protein_coding	Csnk1g1	ENSMUST00000205489	retained_intron		9	1	66036018	3730
ENSMUSG00000028116	protein_coding	Myoz2	ENSMUST00000141588	nonsense_mediated_decay		3	-1	123034844	871
ENSMUSG00000028116	protein_coding	Myoz2	ENSMUST00000143464	processed_transcript		3	-1	123035004	824
ENSMUSG00000028116	protein_coding	Myoz2	ENSMUST00000200514	processed_transcript		3	-1	123034963	434
ENSMUSG00000028116	protein_coding	Myoz2	ENSMUST00000140231	retained_intron		3	-1	123034952	2412
ENSMUSG00000106114	processed_pseudogene	Gm43286	ENSMUST00000197420	processed_pseudogene		3	-1	123043735	424
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000132718	protein_coding		9	1	90054152	631
ENSMUSG00000050315	protein_coding	Synpo2	ENSMUST00000139160	protein_coding		3	-1	123112810	3849
ENSMUSG00000050315	protein_coding	Synpo2	ENSMUST00000106426	protein_coding	principal2	3	-1	123236096	7063
ENSMUSG00000050315	protein_coding	Synpo2	ENSMUST00000106427	protein_coding	alternative2	3	-1	123236147	6937
ENSMUSG00000050315	protein_coding	Synpo2	ENSMUST00000051443	protein_coding		3	-1	123117052	8121
ENSMUSG00000050315	protein_coding	Synpo2	ENSMUST00000198584	protein_coding	alternative2	3	-1	123236147	9203
ENSMUSG00000050315	protein_coding	Synpo2	ENSMUST00000184590	protein_coding		3	-1	123112986	1297
ENSMUSG00000050315	protein_coding	Synpo2	ENSMUST00000184403	processed_transcript		3	-1	123236149	391
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000034915	protein_coding	principal2	9	1	90054267	1617
ENSMUSG00000106490	TEC	Gm43283	ENSMUST00000199138	TEC		3	-1	123211947	2548
ENSMUSG00000105562	TEC	Gm43287	ENSMUST00000197747	TEC		3	-1	123164472	600
ENSMUSG00000106012	processed_pseudogene	Gm43744	ENSMUST00000196387	processed_pseudogene		3	1	123142288	688
ENSMUSG00000106220	TEC	Gm43288	ENSMUST00000197594	TEC		3	-1	123192762	2628
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000127842	retained_intron		9	1	90054506	2743
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000186126	retained_intron		9	1	90054521	818
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000143172	protein_coding		9	1	90054537	370
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000123320	nonsense_mediated_decay		9	1	90054538	1238
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000190338	retained_intron		9	1	90054554	873
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000185459	protein_coding	alternative2	9	1	90054559	872
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000187437	retained_intron		9	1	90060153	480
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000142750	retained_intron		9	1	90062522	732
ENSMUSG00000032359	protein_coding	Ctsh	ENSMUST00000151219	retained_intron		9	1	90071696	424
ENSMUSG00000075463	processed_transcript	4930594M22Rik	ENSMUST00000100291	processed_transcript		14	1	122913030	1824
ENSMUSG00000075463	processed_transcript	4930594M22Rik	ENSMUST00000161599	processed_transcript		14	1	122913067	3595
ENSMUSG00000075463	processed_transcript	4930594M22Rik	ENSMUST00000162218	processed_transcript		14	1	122913075	928
ENSMUSG00000115264	TEC	Gm49260	ENSMUST00000226674	TEC		14	1	122686316	2063
ENSMUSG00000115256	processed_pseudogene	Gm49259	ENSMUST00000227639	processed_pseudogene		14	-1	122610113	995
ENSMUSG00000087505	antisense	Gm15241	ENSMUST00000125700	antisense		X	-1	160499870	474
ENSMUSG00000041625	protein_coding	Ggact	ENSMUST00000110679	protein_coding		14	-1	122913120	686
ENSMUSG00000041625	protein_coding	Ggact	ENSMUST00000038075	protein_coding	principal1	14	-1	122913162	1076
ENSMUSG00000041625	protein_coding	Ggact	ENSMUST00000161322	protein_coding		14	-1	122913148	524
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000008826	protein_coding	principal1	X	1	74270812	799
ENSMUSG00000041625	protein_coding	Ggact	ENSMUST00000160401	protein_coding		14	-1	122913757	727
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000151702	protein_coding		X	1	74270857	648
ENSMUSG00000041625	protein_coding	Ggact	ENSMUST00000162164	protein_coding		14	-1	122913085	609
ENSMUSG00000041625	protein_coding	Ggact	ENSMUST00000227890	retained_intron		14	-1	122913161	3756
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000149171	processed_transcript		X	1	74270858	762
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000162065	protein_coding		9	-1	112185769	2996
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000074085	protein_coding	principal1	X	1	74270860	855
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000142142	retained_intron		X	1	74270956	916
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000135690	protein_coding		X	1	74270979	523
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000125775	retained_intron		X	1	74270986	600
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000134330	retained_intron		X	1	74271409	930
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000148172	retained_intron		14	1	122534324	692
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000144434	retained_intron		X	1	74271442	531
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000138954	retained_intron		X	1	74271743	400
ENSMUSG00000008682	protein_coding	Rpl10	ENSMUST00000146584	retained_intron		X	1	74271837	699
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000154206	protein_coding		14	1	122534331	431
ENSMUSG00000055485	protein_coding	Soga1	ENSMUST00000069098	protein_coding	principal1	2	-1	157079254	7864
ENSMUSG00000055485	protein_coding	Soga1	ENSMUST00000153229	processed_transcript		2	-1	157027472	522
ENSMUSG00000055485	protein_coding	Soga1	ENSMUST00000133571	processed_transcript		2	-1	157040239	674
ENSMUSG00000074628	protein_coding	Tldc2	ENSMUST00000099140	protein_coding	alternative2	2	1	157088453	608
ENSMUSG00000074628	protein_coding	Tldc2	ENSMUST00000166140	protein_coding	principal2	2	1	157087055	639
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000159432	retained_intron		9	-1	112234423	5320
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000038374	protein_coding	principal1	14	1	122534339	2592
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000135578	protein_coding		14	1	122534345	512
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000177312	nonsense_mediated_decay		14	1	122582684	967
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000143240	processed_transcript		14	1	122602919	534
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000147018	nonsense_mediated_decay		14	1	122714029	322
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000152383	nonsense_mediated_decay		14	1	122714055	1268
ENSMUSG00000046480	protein_coding	Scn4b	ENSMUST00000060125	protein_coding	principal1	9	1	45138395	4982
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000156755	processed_transcript		14	1	122714119	287
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000128893	retained_intron		14	1	122737900	604
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000132444	protein_coding		14	1	122790399	514
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000140517	processed_transcript		14	1	122875935	1894
ENSMUSG00000041650	protein_coding	Pcca	ENSMUST00000138836	retained_intron		14	1	122886903	564
ENSMUSG00000023991	protein_coding	Foxp4	ENSMUST00000113265	protein_coding	alternative2	17	-1	47924645	3999
ENSMUSG00000023991	protein_coding	Foxp4	ENSMUST00000113263	protein_coding	alternative2	17	-1	47924400	3156
ENSMUSG00000023991	protein_coding	Foxp4	ENSMUST00000097311	protein_coding	principal4	17	-1	47924435	3197
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000162097	protein_coding	principal1	9	-1	112235018	3952
ENSMUSG00000023991	protein_coding	Foxp4	ENSMUST00000113262	protein_coding	alternative2	17	-1	47924476	3198
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000035085	protein_coding		9	-1	112232501	3254
ENSMUSG00000023991	protein_coding	Foxp4	ENSMUST00000136314	processed_transcript		17	-1	47888433	701
ENSMUSG00000023991	protein_coding	Foxp4	ENSMUST00000154108	protein_coding		17	-1	47878953	365
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000159246	nonsense_mediated_decay		9	-1	112187647	2382
ENSMUSG00000023991	protein_coding	Foxp4	ENSMUST00000137039	retained_intron		17	-1	47888150	579
ENSMUSG00000023991	protein_coding	Foxp4	ENSMUST00000153752	retained_intron		17	-1	47924426	788
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000159451	protein_coding		9	-1	112217261	2805
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000159667	retained_intron		9	-1	112234841	2593
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000159055	protein_coding		9	-1	112235018	1857
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000161412	protein_coding		9	-1	112217351	1687
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000161138	retained_intron		9	-1	112233626	1945
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000162796	protein_coding		9	-1	112217326	722
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000161097	protein_coding		9	-1	112217326	639
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000160478	protein_coding		9	-1	112233815	672
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000162082	retained_intron		9	-1	112187904	2457
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000161467	processed_transcript		9	-1	112187949	2402
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000159220	processed_transcript		9	-1	112187926	2388
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000159183	retained_intron		9	-1	112187880	790
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000162533	processed_transcript		9	-1	112186093	538
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000160741	processed_transcript		9	-1	112185949	430
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000159444	retained_intron		9	-1	112185936	837
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000163025	processed_transcript		9	-1	112231902	468
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000162840	processed_transcript		9	-1	112233872	351
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000161945	processed_transcript		9	-1	112235938	427
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000163004	processed_transcript		9	-1	112188440	422
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000161261	processed_transcript		9	-1	112188474	402
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000162050	retained_intron		9	-1	112217304	2540
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000172380	protein_coding		9	-1	112187929	3366
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000178410	protein_coding		9	-1	112187926	3419
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000037726	protein_coding	principal1	14	-1	122983283	3416
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000107098	protein_coding	alternative1	11	-1	102407489	1606
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000143189	nonsense_mediated_decay		14	-1	122983217	3274
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000126867	protein_coding	principal1	14	-1	122983142	2952
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000111872	protein_coding		9	-1	112187766	3316
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000070218	protein_coding		9	-1	112185949	3181
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000148661	protein_coding	principal1	14	-1	122983142	2719
ENSMUSG00000032503	protein_coding	Arpp21	ENSMUST00000164754	protein_coding	principal1	9	-1	112187766	3310
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000126494	processed_transcript		14	-1	122936031	1054
ENSMUSG00000089718	lincRNA	2310075C17Rik	ENSMUST00000161216	lincRNA		9	1	112227579	326
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000228661	retained_intron		14	-1	122921922	856
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000125900	retained_intron		14	-1	122929133	2853
ENSMUSG00000087038	lincRNA	2900079G21Rik	ENSMUST00000149308	lincRNA		9	1	112234277	1019
ENSMUSG00000087038	lincRNA	2900079G21Rik	ENSMUST00000144424	lincRNA		9	1	112234294	2944
ENSMUSG00000087038	lincRNA	2900079G21Rik	ENSMUST00000139552	lincRNA		9	1	112234381	1139
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000135917	retained_intron		14	-1	122983240	2237
ENSMUSG00000087038	lincRNA	2900079G21Rik	ENSMUST00000163302	lincRNA		9	1	112256574	2764
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000227430	processed_transcript		14	-1	122954915	753
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000128969	nonsense_mediated_decay		14	-1	122983275	842
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000228552	retained_intron		14	-1	122978294	438
ENSMUSG00000110876	lincRNA	4933411E02Rik	ENSMUST00000216779	lincRNA		9	-1	112461630	1030
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000153496	processed_transcript		14	-1	122983169	466
ENSMUSG00000041594	protein_coding	Tmtc4	ENSMUST00000141478	processed_transcript		14	-1	122984035	395
ENSMUSG00000110996	lincRNA	Gm36251	ENSMUST00000213712	lincRNA		9	-1	113123029	1914
ENSMUSG00000085423	antisense	4930594M22Rik	ENSMUST00000136187	antisense		14	1	122952119	514
ENSMUSG00000110996	lincRNA	Gm36251	ENSMUST00000214620	lincRNA		9	-1	113123029	276
ENSMUSG00000111235	lincRNA	Gm4657	ENSMUST00000213839	lincRNA		9	-1	113189815	787
ENSMUSG00000111022	lincRNA	Gm36367	ENSMUST00000217623	lincRNA		9	1	113287707	1158
ENSMUSG00000110784	lincRNA	Gm39436	ENSMUST00000215648	lincRNA		9	-1	113352369	664
ENSMUSG00000111532	lincRNA	Gm36485	ENSMUST00000214286	lincRNA		9	-1	113420060	464
ENSMUSG00000111199	lincRNA	Gm47875	ENSMUST00000216389	lincRNA		9	1	113420111	1993
ENSMUSG00000111388	processed_pseudogene	Gm7183	ENSMUST00000213870	processed_pseudogene		9	1	113530229	1005
ENSMUSG00000109890	lincRNA	AU023762	ENSMUST00000209897	lincRNA		9	-1	113587152	2179
ENSMUSG00000109890	lincRNA	AU023762	ENSMUST00000210875	lincRNA		9	-1	113511455	803
ENSMUSG00000109890	lincRNA	AU023762	ENSMUST00000209241	lincRNA		9	-1	113611735	639
ENSMUSG00000109890	lincRNA	AU023762	ENSMUST00000220102	lincRNA		9	-1	113508355	375
ENSMUSG00000109890	lincRNA	AU023762	ENSMUST00000209716	lincRNA		9	-1	113611783	961
ENSMUSG00000111364	lincRNA	Gm36745	ENSMUST00000213455	lincRNA		9	-1	113642054	1594
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000018821	protein_coding	principal2	11	-1	102407544	1685
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000128825	protein_coding		11	-1	102404493	728
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000085248	protein_coding	principal3	9	-1	90114715	1882
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000169860	protein_coding	alternative1	9	-1	90114774	1824
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000153395	retained_intron		11	-1	102407506	1564
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000134669	nonsense_mediated_decay		11	-1	102407508	949
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000187771	processed_transcript		9	-1	90114289	1540
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000141535	retained_intron		11	-1	102407456	767
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000155104	protein_coding		11	-1	102406816	977
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000142097	nonsense_mediated_decay		11	-1	102407487	791
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000123688	retained_intron		11	-1	102407463	878
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000149777	protein_coding		11	-1	102407315	740
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000130436	protein_coding		11	-1	102406955	679
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000154001	protein_coding		11	-1	102407383	686
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000190377	retained_intron		9	-1	90114640	4640
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000191189	protein_coding		9	-1	90114744	1223
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000124755	protein_coding		11	-1	102407946	642
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000189089	retained_intron		9	-1	90095902	1536
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000147160	processed_transcript		11	-1	102406808	416
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000189420	retained_intron		9	-1	90097889	504
ENSMUSG00000018677	protein_coding	Slc25a39	ENSMUST00000147860	retained_intron		11	-1	102406884	656
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000191353	protein_coding		9	-1	90114659	600
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000188905	processed_transcript		9	-1	90114529	603
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000190345	nonsense_mediated_decay		9	-1	90114698	335
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000189241	retained_intron		9	-1	90114610	666
ENSMUSG00000062270	protein_coding	Morf4l1	ENSMUST00000185433	retained_intron		9	-1	90114583	2584
ENSMUSG00000066122	protein_coding	Olfr45	ENSMUST00000214637	protein_coding	principal1	7	1	140681951	6157
ENSMUSG00000066122	protein_coding	Olfr45	ENSMUST00000084454	protein_coding	principal1	7	1	140690884	1035
ENSMUSG00000116555	lincRNA	Gm38477	ENSMUST00000231918	lincRNA		16	-1	87049260	3117
ENSMUSG00000116555	lincRNA	Gm38477	ENSMUST00000231899	lincRNA		16	-1	87023797	1805
ENSMUSG00000057997	protein_coding	Olfr541	ENSMUST00000210357	protein_coding	principal1	7	1	140697267	1642
ENSMUSG00000057997	protein_coding	Olfr541	ENSMUST00000209857	protein_coding		7	1	140697316	577
ENSMUSG00000057997	protein_coding	Olfr541	ENSMUST00000080681	protein_coding	principal1	7	1	140704165	1103
ENSMUSG00000116979	lincRNA	Gm32865	ENSMUST00000232056	lincRNA		16	-1	87128439	509
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000238974	protein_coding	alternative2	13	1	24501525	2364
ENSMUSG00000054031	transcribed_unprocessed_pseudogene	Rdh18-ps	ENSMUST00000137395	transcribed_unprocessed_pseudogene		10	1	127824284	944
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000109470	protein_coding	principal1	15	1	83784829	3281
ENSMUSG00000054031	transcribed_unprocessed_pseudogene	Rdh18-ps	ENSMUST00000143917	processed_transcript		10	1	127824284	953
ENSMUSG00000069456	protein_coding	Rdh16	ENSMUST00000155739	nonsense_mediated_decay		10	1	127801152	2277
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000123387	nonsense_mediated_decay		15	1	83788880	3165
ENSMUSG00000069456	protein_coding	Rdh16	ENSMUST00000125163	nonsense_mediated_decay		10	1	127801153	3286
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000046168	protein_coding	principal1	15	1	83780023	3265
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000109469	protein_coding		15	1	83779467	361
ENSMUSG00000069456	protein_coding	Rdh16	ENSMUST00000071646	protein_coding	principal1	10	1	127801154	3207
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000150489	protein_coding		15	1	83796582	659
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000125739	protein_coding		15	1	83836007	665
ENSMUSG00000110199	transcribed_unprocessed_pseudogene	Olfr542-ps1	ENSMUST00000218525	processed_transcript		7	1	140717473	4039
ENSMUSG00000110199	transcribed_unprocessed_pseudogene	Olfr542-ps1	ENSMUST00000211706	transcribed_unprocessed_pseudogene		7	1	140721282	831
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000148868	protein_coding		15	1	83836040	687
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000163723	protein_coding		15	1	83779982	1064
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000172115	protein_coding		15	1	83791939	795
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000171560	nonsense_mediated_decay		15	1	83800030	655
ENSMUSG00000041708	protein_coding	Mpped1	ENSMUST00000172398	protein_coding		15	1	83792014	795
ENSMUSG00000053093	protein_coding	Myh7	ENSMUST00000102803	protein_coding	principal1	14	-1	54994626	6135
ENSMUSG00000053093	protein_coding	Myh7	ENSMUST00000168485	protein_coding	principal1	14	-1	54994626	6230
ENSMUSG00000053093	protein_coding	Myh7	ENSMUST00000227401	retained_intron		14	-1	54973528	595
ENSMUSG00000053093	protein_coding	Myh7	ENSMUST00000149852	retained_intron		14	-1	54987418	3769
ENSMUSG00000053093	protein_coding	Myh7	ENSMUST00000228837	protein_coding		14	-1	54993691	451
ENSMUSG00000053093	protein_coding	Myh7	ENSMUST00000227518	protein_coding		14	-1	54994543	360
ENSMUSG00000053093	protein_coding	Myh7	ENSMUST00000153783	protein_coding		14	-1	54994548	377
ENSMUSG00000053093	protein_coding	Myh7	ENSMUST00000226424	protein_coding		14	-1	54994543	345
ENSMUSG00000115610	antisense	Gm31251	ENSMUST00000228715	antisense		14	1	54979393	1248
ENSMUSG00000039452	protein_coding	Snx22	ENSMUST00000044711	protein_coding	principal1	9	-1	66069719	2543
ENSMUSG00000101680	antisense	Gm29015	ENSMUST00000187147	antisense		14	1	54973029	207
ENSMUSG00000039452	protein_coding	Snx22	ENSMUST00000214332	retained_intron		9	-1	66069715	647
ENSMUSG00000097652	antisense	Mhrt	ENSMUST00000185798	antisense		14	1	54968678	447
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000110383	protein_coding	alternative2	13	1	24582189	5476
ENSMUSG00000032383	protein_coding	Ppib	ENSMUST00000213785	retained_intron		9	1	66060222	3305
ENSMUSG00000097652	antisense	Mhrt	ENSMUST00000181782	antisense		14	1	54968787	828
ENSMUSG00000032383	protein_coding	Ppib	ENSMUST00000034947	protein_coding	principal1	9	1	66060231	892
ENSMUSG00000019487	protein_coding	Trip10	ENSMUST00000224947	protein_coding	principal2	17	1	57249455	2016
ENSMUSG00000019487	protein_coding	Trip10	ENSMUST00000019631	protein_coding	alternative2	17	1	57249482	2224
ENSMUSG00000105175	processed_pseudogene	Gm43097	ENSMUST00000196867	processed_pseudogene		3	1	108881823	151
ENSMUSG00000019487	protein_coding	Trip10	ENSMUST00000224885	protein_coding	alternative2	17	1	57249500	2136
ENSMUSG00000019487	protein_coding	Trip10	ENSMUST00000225664	nonsense_mediated_decay		17	1	57249502	422
ENSMUSG00000045326	protein_coding	Fndc7	ENSMUST00000123018	processed_transcript		3	-1	108858613	2831
ENSMUSG00000019487	protein_coding	Trip10	ENSMUST00000224152	protein_coding	alternative2	17	1	57249548	1812
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000134370	retained_intron		13	1	24614610	2342
ENSMUSG00000019487	protein_coding	Trip10	ENSMUST00000224586	retained_intron		17	1	57253111	799
ENSMUSG00000048154	protein_coding	Kmt2d	ENSMUST00000023741	protein_coding	principal2	15	-1	98871204	19823
ENSMUSG00000019487	protein_coding	Trip10	ENSMUST00000225523	retained_intron		17	1	57254057	768
ENSMUSG00000019487	protein_coding	Trip10	ENSMUST00000224261	retained_intron		17	1	57256803	572
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000091694	protein_coding	principal3	13	1	24614610	3142
ENSMUSG00000048154	protein_coding	Kmt2d	ENSMUST00000191973	protein_coding		15	-1	98837164	899
ENSMUSG00000019487	protein_coding	Trip10	ENSMUST00000224904	retained_intron		17	1	57260970	683
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000132689	nonsense_mediated_decay		13	1	24614627	3261
ENSMUSG00000048154	protein_coding	Kmt2d	ENSMUST00000229651	nonsense_mediated_decay		15	-1	98849237	470
ENSMUSG00000111811	lincRNA	Gm39327	ENSMUST00000213594	lincRNA		9	-1	45169946	1982
ENSMUSG00000048154	protein_coding	Kmt2d	ENSMUST00000184363	protein_coding		15	-1	98856309	751
ENSMUSG00000111811	lincRNA	Gm39327	ENSMUST00000215874	lincRNA		9	-1	45169946	1951
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000110384	protein_coding	alternative2	13	1	24638648	5608
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000177298	retained_intron		13	1	24638650	665
ENSMUSG00000048154	protein_coding	Kmt2d	ENSMUST00000178486	protein_coding	alternative2	15	-1	98871183	19805
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000058009	protein_coding	alternative2	13	1	24638684	2550
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000038477	protein_coding	alternative2	13	1	24638696	3371
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000138547	retained_intron		13	1	24638713	1350
ENSMUSG00000096647	processed_pseudogene	Tmem41b-ps	ENSMUST00000178436	processed_pseudogene		9	1	90118937	871
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000176303	retained_intron		13	1	24672939	546
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000177174	retained_intron		13	1	24675472	649
ENSMUSG00000104263	TEC	9430062P05Rik	ENSMUST00000192703	TEC		9	-1	90159804	3345
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000175986	retained_intron		13	1	24687800	2004
ENSMUSG00000036006	protein_coding	Ripor2	ENSMUST00000177489	retained_intron		13	1	24710063	760
ENSMUSG00000115980	TEC	Gm49437	ENSMUST00000230986	TEC		15	-1	98872613	285
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000029941	protein_coding	principal3	3	-1	142395693	5016
ENSMUSG00000085603	transcribed_processed_pseudogene	Gm11346	ENSMUST00000149751	processed_transcript		13	-1	24604767	2893
ENSMUSG00000116506	lincRNA	5730414N17Rik	ENSMUST00000230130	lincRNA		15	1	98872644	1439
ENSMUSG00000085603	transcribed_processed_pseudogene	Gm11346	ENSMUST00000135889	retained_intron		13	-1	24604925	2832
ENSMUSG00000085603	transcribed_processed_pseudogene	Gm11346	ENSMUST00000118346	transcribed_processed_pseudogene		13	-1	24599052	704
ENSMUSG00000085603	transcribed_processed_pseudogene	Gm11346	ENSMUST00000127863	processed_transcript		13	-1	24604696	492
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000129714	processed_transcript		X	1	151800807	1250
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000139386	processed_transcript		X	1	151800883	665
ENSMUSG00000002984	protein_coding	Tomm40	ENSMUST00000093552	protein_coding	principal1	7	-1	19715438	1577
ENSMUSG00000002984	protein_coding	Tomm40	ENSMUST00000032555	protein_coding	principal1	7	-1	19715425	1646
ENSMUSG00000002984	protein_coding	Tomm40	ENSMUST00000174476	retained_intron		7	-1	19710965	620
ENSMUSG00000002984	protein_coding	Tomm40	ENSMUST00000172705	protein_coding		7	-1	19703140	361
ENSMUSG00000002984	protein_coding	Tomm40	ENSMUST00000208286	retained_intron		7	-1	19703577	600
ENSMUSG00000002984	protein_coding	Tomm40	ENSMUST00000173966	retained_intron		7	-1	19715428	2766
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000195975	protein_coding	alternative2	3	-1	142391808	1845
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000200043	protein_coding	alternative2	3	-1	142391808	1581
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000196220	protein_coding	alternative2	3	-1	142391808	1725
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000198381	protein_coding	alternative2	3	-1	142395578	1555
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000196050	retained_intron		3	-1	142246549	2089
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000200650	protein_coding		3	-1	142303979	669
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000197808	protein_coding		3	-1	142304442	759
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000146260	processed_transcript		X	1	74281912	277
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000135012	processed_transcript		X	1	74281912	332
ENSMUSG00000045326	protein_coding	Fndc7	ENSMUST00000102620	protein_coding	principal2	3	-1	108890008	3477
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000170361	protein_coding		3	-1	142391850	2010
ENSMUSG00000045326	protein_coding	Fndc7	ENSMUST00000053065	protein_coding		3	-1	108889815	3009
ENSMUSG00000045326	protein_coding	Fndc7	ENSMUST00000151713	processed_transcript		3	-1	108858609	405
ENSMUSG00000045326	protein_coding	Fndc7	ENSMUST00000147002	processed_transcript		3	-1	108870578	550
ENSMUSG00000045326	protein_coding	Fndc7	ENSMUST00000139137	retained_intron		3	-1	108881779	2433
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000090134	protein_coding		3	-1	142395607	1722
ENSMUSG00000045326	protein_coding	Fndc7	ENSMUST00000180063	protein_coding	alternative2	3	-1	108889706	4820
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000168967	protein_coding		3	-1	142391850	1755
ENSMUSG00000062300	protein_coding	Nectin2	ENSMUST00000075447	protein_coding	principal3	7	-1	19749573	2735
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000152757	processed_transcript		X	1	151801314	194
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000196908	protein_coding		3	-1	142395618	1196
ENSMUSG00000062300	protein_coding	Nectin2	ENSMUST00000108450	protein_coding	alternative2	7	-1	19749533	1955
ENSMUSG00000062300	protein_coding	Nectin2	ENSMUST00000207271	processed_transcript		7	-1	19750483	399
ENSMUSG00000092381	antisense	Gm20512	ENSMUST00000172483	antisense		7	1	19715016	618
ENSMUSG00000087028	lincRNA	Gm13387	ENSMUST00000123483	lincRNA		2	-1	25145396	638
ENSMUSG00000087028	lincRNA	Gm13387	ENSMUST00000131147	lincRNA		2	-1	25145396	2646
ENSMUSG00000087028	lincRNA	Gm13387	ENSMUST00000149619	lincRNA		2	-1	25145323	659
ENSMUSG00000118563	unitary_pseudogene	AL732309.1	ENSMUST00000238850	unitary_pseudogene		2	1	25116281	1981
ENSMUSG00000028273	protein_coding	Pdlim5	ENSMUST00000058626	protein_coding		3	-1	142395696	873
ENSMUSG00000079845	protein_coding	Xlr4a	ENSMUST00000078775	protein_coding	principal1	X	-1	73082478	1162
ENSMUSG00000079845	protein_coding	Xlr4a	ENSMUST00000139191	protein_coding		X	-1	73082434	730
ENSMUSG00000079845	protein_coding	Xlr4a	ENSMUST00000156148	processed_transcript		X	-1	73079466	677
ENSMUSG00000079845	protein_coding	Xlr4a	ENSMUST00000114534	protein_coding		X	-1	73082456	372
ENSMUSG00000027881	protein_coding	Prpf38b	ENSMUST00000129273	nonsense_mediated_decay		3	-1	108911696	3050
ENSMUSG00000027881	protein_coding	Prpf38b	ENSMUST00000029480	protein_coding	principal1	3	-1	108911727	3026
ENSMUSG00000027881	protein_coding	Prpf38b	ENSMUST00000199735	nonsense_mediated_decay		3	-1	108911468	2508
ENSMUSG00000027881	protein_coding	Prpf38b	ENSMUST00000125208	retained_intron		3	-1	108905585	977
ENSMUSG00000027881	protein_coding	Prpf38b	ENSMUST00000127478	processed_transcript		3	-1	108906118	556
ENSMUSG00000027881	protein_coding	Prpf38b	ENSMUST00000156808	processed_transcript		3	-1	108907981	531
ENSMUSG00000027881	protein_coding	Prpf38b	ENSMUST00000145720	retained_intron		3	-1	108911710	2108
ENSMUSG00000027881	protein_coding	Prpf38b	ENSMUST00000197805	retained_intron		3	-1	108910629	3814
ENSMUSG00000058486	protein_coding	Wdr91	ENSMUST00000081214	protein_coding	principal1	6	-1	34910876	2682
ENSMUSG00000031311	protein_coding	Nono	ENSMUST00000147708	protein_coding		X	1	101429318	424
ENSMUSG00000058486	protein_coding	Wdr91	ENSMUST00000146968	nonsense_mediated_decay		6	-1	34910876	2569
ENSMUSG00000032504	protein_coding	Pdcd6ip	ENSMUST00000035086	protein_coding	principal3	9	-1	113708259	5951
ENSMUSG00000058486	protein_coding	Wdr91	ENSMUST00000149448	protein_coding		6	-1	34910595	711
ENSMUSG00000058486	protein_coding	Wdr91	ENSMUST00000133336	protein_coding		6	-1	34910662	602
ENSMUSG00000092085	antisense	Gm17224	ENSMUST00000171429	antisense		1	1	172213021	500
ENSMUSG00000058486	protein_coding	Wdr91	ENSMUST00000152488	protein_coding		6	-1	34910563	412
ENSMUSG00000058486	protein_coding	Wdr91	ENSMUST00000201569	retained_intron		6	-1	34910833	2287
ENSMUSG00000058486	protein_coding	Wdr91	ENSMUST00000145765	processed_transcript		6	-1	34910836	385
ENSMUSG00000032504	protein_coding	Pdcd6ip	ENSMUST00000111861	protein_coding	alternative2	9	-1	113708244	3223
ENSMUSG00000058486	protein_coding	Wdr91	ENSMUST00000134830	processed_transcript		6	-1	34910842	340
ENSMUSG00000032504	protein_coding	Pdcd6ip	ENSMUST00000156425	retained_intron		9	-1	113697577	567
ENSMUSG00000032504	protein_coding	Pdcd6ip	ENSMUST00000135545	processed_transcript		9	-1	113685415	618
ENSMUSG00000032504	protein_coding	Pdcd6ip	ENSMUST00000137104	retained_intron		9	-1	113662414	572
ENSMUSG00000032504	protein_coding	Pdcd6ip	ENSMUST00000142256	retained_intron		9	-1	113657294	847
ENSMUSG00000007122	protein_coding	Casq1	ENSMUST00000003554	protein_coding	principal1	1	-1	172219868	1847
ENSMUSG00000007122	protein_coding	Casq1	ENSMUST00000170638	retained_intron		1	-1	172213955	990
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000153687	nonsense_mediated_decay		X	1	151803243	4473
ENSMUSG00000007122	protein_coding	Casq1	ENSMUST00000170700	protein_coding		1	-1	172219715	493
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000149344	processed_transcript		X	1	151803261	681
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000069722	protein_coding	principal3	X	1	74282697	1851
ENSMUSG00000032363	protein_coding	Adamts7	ENSMUST00000113059	protein_coding	alternative2	9	1	90163069	5379
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000149055	retained_intron		X	1	74282750	2891
ENSMUSG00000032363	protein_coding	Adamts7	ENSMUST00000167122	protein_coding	alternative2	9	1	90163078	5338
ENSMUSG00000060675	protein_coding	Plaat3	ENSMUST00000136465	protein_coding		19	1	7557459	3048
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000137816	retained_intron		X	1	151803327	1702
ENSMUSG00000032363	protein_coding	Adamts7	ENSMUST00000134996	nonsense_mediated_decay		9	1	90163124	5052
ENSMUSG00000032363	protein_coding	Adamts7	ENSMUST00000147250	protein_coding	alternative2	9	1	90163202	4833
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000156880	retained_intron		X	1	74282750	800
ENSMUSG00000060675	protein_coding	Plaat3	ENSMUST00000025925	protein_coding	principal1	19	1	7557459	3523
ENSMUSG00000032363	protein_coding	Adamts7	ENSMUST00000113060	protein_coding	principal3	9	1	90163226	5098
ENSMUSG00000060675	protein_coding	Plaat3	ENSMUST00000141887	protein_coding		19	1	7557477	802
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000124200	protein_coding		X	1	74282750	1742
ENSMUSG00000060675	protein_coding	Plaat3	ENSMUST00000136756	protein_coding	principal1	19	1	7557485	1901
ENSMUSG00000032363	protein_coding	Adamts7	ENSMUST00000144943	retained_intron		9	1	90188654	706
ENSMUSG00000032363	protein_coding	Adamts7	ENSMUST00000138227	processed_transcript		9	1	90190984	922
ENSMUSG00000032363	protein_coding	Adamts7	ENSMUST00000124441	retained_intron		9	1	90195128	1497
ENSMUSG00000031311	protein_coding	Nono	ENSMUST00000033673	protein_coding	principal1	X	1	101429555	2562
ENSMUSG00000078202	protein_coding	Nrarp	ENSMUST00000104999	protein_coding	principal1	2	1	25180758	2582
ENSMUSG00000031311	protein_coding	Nono	ENSMUST00000126019	retained_intron		X	1	101429735	1364
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000156212	retained_intron		X	1	74282750	2368
ENSMUSG00000031311	protein_coding	Nono	ENSMUST00000147498	retained_intron		X	1	101442591	687
ENSMUSG00000103217	antisense	Gm38287	ENSMUST00000195193	antisense		2	-1	25183339	2051
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000156072	retained_intron		X	1	74282760	879
ENSMUSG00000031311	protein_coding	Nono	ENSMUST00000136251	retained_intron		X	1	101443306	1337
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000134936	retained_intron		X	1	74282760	1078
ENSMUSG00000031311	protein_coding	Nono	ENSMUST00000148312	processed_transcript		X	1	101444733	345
ENSMUSG00000037410	protein_coding	Tbc1d2b	ENSMUST00000041767	protein_coding	principal1	9	-1	90270769	5956
ENSMUSG00000031311	protein_coding	Nono	ENSMUST00000134783	retained_intron		X	1	101445823	631
ENSMUSG00000037410	protein_coding	Tbc1d2b	ENSMUST00000144348	nonsense_mediated_decay		9	-1	90270804	655
ENSMUSG00000037410	protein_coding	Tbc1d2b	ENSMUST00000128874	protein_coding		9	-1	90270771	3473
ENSMUSG00000037410	protein_coding	Tbc1d2b	ENSMUST00000144646	processed_transcript		9	-1	90255927	248
ENSMUSG00000081520	processed_pseudogene	Gm16200	ENSMUST00000120385	processed_pseudogene		9	-1	90221625	331
ENSMUSG00000057836	protein_coding	Xlr3a	ENSMUST00000114524	protein_coding	alternative2	X	-1	73097017	1584
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000114180	protein_coding	alternative1	X	1	74282762	1786
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000147844	retained_intron		X	1	74282766	802
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000132437	protein_coding		X	1	74282772	768
ENSMUSG00000057836	protein_coding	Xlr3a	ENSMUST00000172709	retained_intron		X	-1	73097023	3783
ENSMUSG00000051517	protein_coding	Arhgef39	ENSMUST00000152134	protein_coding		4	-1	43497234	813
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000134914	retained_intron		X	1	74282789	886
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000125972	retained_intron		X	1	74282921	826
ENSMUSG00000057836	protein_coding	Xlr3a	ENSMUST00000074619	protein_coding	principal2	X	-1	73097095	1645
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000135504	protein_coding		X	1	74283008	747
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000114182	protein_coding		X	1	74283082	750
ENSMUSG00000057836	protein_coding	Xlr3a	ENSMUST00000172938	nonsense_mediated_decay		X	-1	73095003	648
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000176453	protein_coding		X	1	74283937	445
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000153459	retained_intron		X	1	74287665	867
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000124915	nonsense_mediated_decay		X	1	74288020	790
ENSMUSG00000057836	protein_coding	Xlr3a	ENSMUST00000173473	processed_transcript		X	-1	73097019	383
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000131116	protein_coding		X	1	74288072	893
ENSMUSG00000057836	protein_coding	Xlr3a	ENSMUST00000173742	nonsense_mediated_decay		X	-1	73096878	536
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000134432	nonsense_mediated_decay		X	1	74288662	655
ENSMUSG00000057836	protein_coding	Xlr3a	ENSMUST00000174162	retained_intron		X	-1	73097059	360
ENSMUSG00000009995	protein_coding	Taz	ENSMUST00000156788	retained_intron		X	1	74288673	808
ENSMUSG00000051517	protein_coding	Arhgef39	ENSMUST00000054538	protein_coding	principal1	4	-1	43499695	1659
ENSMUSG00000023000	protein_coding	Dhh	ENSMUST00000023737	protein_coding	principal1	15	-1	98898540	4242
ENSMUSG00000023000	protein_coding	Dhh	ENSMUST00000229775	protein_coding		15	-1	98898506	694
ENSMUSG00000051517	protein_coding	Arhgef39	ENSMUST00000128754	processed_transcript		4	-1	43499619	2595
ENSMUSG00000051517	protein_coding	Arhgef39	ENSMUST00000129378	processed_transcript		4	-1	43497213	966
ENSMUSG00000051638	antisense	Gm9857	ENSMUST00000197884	antisense		3	-1	108940446	574
ENSMUSG00000051638	antisense	Gm9857	ENSMUST00000050914	antisense		3	-1	108940445	393
ENSMUSG00000051517	protein_coding	Arhgef39	ENSMUST00000125834	processed_transcript		4	-1	43499661	1508
ENSMUSG00000051517	protein_coding	Arhgef39	ENSMUST00000136005	protein_coding		4	-1	43499608	769
ENSMUSG00000051517	protein_coding	Arhgef39	ENSMUST00000154905	processed_transcript		4	-1	43499115	636
ENSMUSG00000045662	protein_coding	Henmt1	ENSMUST00000197427	protein_coding		3	1	108940059	514
ENSMUSG00000051517	protein_coding	Arhgef39	ENSMUST00000147124	processed_transcript		4	-1	43499075	613
ENSMUSG00000051517	protein_coding	Arhgef39	ENSMUST00000146781	processed_transcript		4	-1	43499611	775
ENSMUSG00000051517	protein_coding	Arhgef39	ENSMUST00000156058	processed_transcript		4	-1	43499661	383
ENSMUSG00000019088	protein_coding	Dnase1l1	ENSMUST00000239458	protein_coding	alternative2	X	-1	74281736	1625
ENSMUSG00000019088	protein_coding	Dnase1l1	ENSMUST00000075821	protein_coding	alternative2	X	-1	74282337	1511
ENSMUSG00000019088	protein_coding	Dnase1l1	ENSMUST00000114189	protein_coding		X	-1	74281598	755
ENSMUSG00000023755	protein_coding	Rhebl1	ENSMUST00000229348	protein_coding		15	-1	98881276	1069
ENSMUSG00000019088	protein_coding	Dnase1l1	ENSMUST00000119361	protein_coding		X	-1	74281675	513
ENSMUSG00000019088	protein_coding	Dnase1l1	ENSMUST00000128763	retained_intron		X	-1	74276846	469
ENSMUSG00000019088	protein_coding	Dnase1l1	ENSMUST00000148882	retained_intron		X	-1	74281626	664
ENSMUSG00000019088	protein_coding	Dnase1l1	ENSMUST00000239445	protein_coding	principal2	X	-1	74282333	1508
ENSMUSG00000023755	protein_coding	Rhebl1	ENSMUST00000024518	protein_coding	principal1	15	-1	98881480	1261
ENSMUSG00000019088	protein_coding	Dnase1l1	ENSMUST00000019232	protein_coding	principal2	X	-1	74281736	1625
ENSMUSG00000084271	processed_pseudogene	Gm14846	ENSMUST00000121868	processed_pseudogene		X	1	74278654	216
ENSMUSG00000059555	protein_coding	Tor4a	ENSMUST00000081869	protein_coding	principal1	2	-1	25196886	3255
ENSMUSG00000059555	protein_coding	Tor4a	ENSMUST00000142857	protein_coding		2	-1	25196759	774
ENSMUSG00000059555	protein_coding	Tor4a	ENSMUST00000137920	protein_coding		2	-1	25196771	360
ENSMUSG00000023755	protein_coding	Rhebl1	ENSMUST00000229352	retained_intron		15	-1	98893908	1604
ENSMUSG00000023755	protein_coding	Rhebl1	ENSMUST00000230623	processed_transcript		15	-1	98880901	861
ENSMUSG00000023755	protein_coding	Rhebl1	ENSMUST00000147015	processed_transcript		15	-1	98881090	1038
ENSMUSG00000023755	protein_coding	Rhebl1	ENSMUST00000229876	protein_coding		15	-1	98881334	798
ENSMUSG00000023755	protein_coding	Rhebl1	ENSMUST00000229556	protein_coding		15	-1	98894540	810
ENSMUSG00000023755	protein_coding	Rhebl1	ENSMUST00000229508	protein_coding		15	-1	98894123	819
ENSMUSG00000023755	protein_coding	Rhebl1	ENSMUST00000155699	retained_intron		15	-1	98880746	551
ENSMUSG00000116033	antisense	Gm49442	ENSMUST00000230242	antisense		15	1	98893351	1460
ENSMUSG00000111666	lincRNA	Gm30849	ENSMUST00000214503	lincRNA		9	1	90303800	1379
ENSMUSG00000099366	processed_pseudogene	Gm2497	ENSMUST00000189539	processed_pseudogene		9	-1	90733524	601
ENSMUSG00000101938	processed_pseudogene	Gm29605	ENSMUST00000190800	processed_pseudogene		9	-1	90734436	292
ENSMUSG00000100663	processed_pseudogene	Gm29604	ENSMUST00000187176	processed_pseudogene		9	-1	90747542	163
ENSMUSG00000099512	lincRNA	Gm28703	ENSMUST00000185312	lincRNA		9	-1	90828860	1159
ENSMUSG00000103547	TEC	Gm37665	ENSMUST00000192353	TEC		9	1	90863159	149
ENSMUSG00000020664	protein_coding	Dld	ENSMUST00000110857	protein_coding	principal1	12	-1	31351453	2544
ENSMUSG00000102076	processed_pseudogene	Gm20561	ENSMUST00000188131	processed_pseudogene		9	-1	90908197	292
ENSMUSG00000020664	protein_coding	Dld	ENSMUST00000218624	retained_intron		12	-1	31341538	661
ENSMUSG00000099406	lincRNA	Gm29408	ENSMUST00000187536	lincRNA		9	1	90938980	216
ENSMUSG00000020664	protein_coding	Dld	ENSMUST00000219213	retained_intron		12	-1	31341714	583
ENSMUSG00000020664	protein_coding	Dld	ENSMUST00000220415	retained_intron		12	-1	31351414	1176
ENSMUSG00000056904	processed_pseudogene	Gm5620	ENSMUST00000077991	processed_pseudogene		9	1	91097149	1348
ENSMUSG00000103938	TEC	Gm36960	ENSMUST00000195491	TEC		9	-1	91130518	2035
ENSMUSG00000045662	protein_coding	Henmt1	ENSMUST00000059946	protein_coding	principal2	3	1	108940084	1998
ENSMUSG00000100568	processed_pseudogene	Gm29602	ENSMUST00000186887	processed_pseudogene		9	1	91216015	442
ENSMUSG00000045662	protein_coding	Henmt1	ENSMUST00000098680	protein_coding	alternative2	3	1	108940114	1466
ENSMUSG00000102814	TEC	Gm37812	ENSMUST00000195216	TEC		9	-1	91273404	2475
ENSMUSG00000111210	processed_pseudogene	Gm18378	ENSMUST00000216245	processed_pseudogene		9	1	91290988	628
ENSMUSG00000045662	protein_coding	Henmt1	ENSMUST00000106586	protein_coding	principal2	3	1	108940500	1838
ENSMUSG00000045662	protein_coding	Henmt1	ENSMUST00000196400	nonsense_mediated_decay		3	1	108941311	896
ENSMUSG00000045662	protein_coding	Henmt1	ENSMUST00000196533	protein_coding	alternative2	3	1	108941311	1491
ENSMUSG00000020275	protein_coding	Rel	ENSMUST00000102864	protein_coding	principal1	11	-1	23770970	7466
ENSMUSG00000084288	processed_pseudogene	Gm5228	ENSMUST00000117186	processed_pseudogene		17	1	47936090	357
ENSMUSG00000082492	processed_pseudogene	Gm14871	ENSMUST00000119056	processed_pseudogene		17	-1	48003572	194
ENSMUSG00000024097	protein_coding	Srsf7	ENSMUST00000063417	protein_coding	principal2	17	-1	80207305	2288
ENSMUSG00000039234	protein_coding	Sec24d	ENSMUST00000047923	protein_coding	principal1	3	1	123267455	3903
ENSMUSG00000039234	protein_coding	Sec24d	ENSMUST00000198210	retained_intron		3	1	123267479	409
ENSMUSG00000039234	protein_coding	Sec24d	ENSMUST00000200333	protein_coding		3	1	123267490	307
ENSMUSG00000024097	protein_coding	Srsf7	ENSMUST00000234095	protein_coding		17	-1	80206857	2403
ENSMUSG00000039234	protein_coding	Sec24d	ENSMUST00000197291	retained_intron		3	1	123290398	3649
ENSMUSG00000039234	protein_coding	Sec24d	ENSMUST00000196167	retained_intron		3	1	123334826	1947
ENSMUSG00000024097	protein_coding	Srsf7	ENSMUST00000234503	nonsense_mediated_decay		17	-1	80207307	1991
ENSMUSG00000039234	protein_coding	Sec24d	ENSMUST00000196631	processed_transcript		3	1	123337305	376
ENSMUSG00000039234	protein_coding	Sec24d	ENSMUST00000200309	retained_intron		3	1	123354825	421
ENSMUSG00000039234	protein_coding	Sec24d	ENSMUST00000196482	retained_intron		3	1	123364714	923
ENSMUSG00000024097	protein_coding	Srsf7	ENSMUST00000234696	protein_coding		17	-1	80207303	987
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000041717	protein_coding	alternative2	19	1	55741820	3590
ENSMUSG00000024097	protein_coding	Srsf7	ENSMUST00000234889	retained_intron		17	-1	80207304	1898
ENSMUSG00000024097	protein_coding	Srsf7	ENSMUST00000235036	retained_intron		17	-1	80207305	1921
ENSMUSG00000024097	protein_coding	Srsf7	ENSMUST00000235069	protein_coding	alternative1	17	-1	80207303	1040
ENSMUSG00000024097	protein_coding	Srsf7	ENSMUST00000234577	retained_intron		17	-1	80204945	839
ENSMUSG00000022043	protein_coding	Trim35	ENSMUST00000022623	protein_coding	principal1	14	1	66297031	3678
ENSMUSG00000022043	protein_coding	Trim35	ENSMUST00000223737	retained_intron		14	1	66297066	1057
ENSMUSG00000022043	protein_coding	Trim35	ENSMUST00000121006	protein_coding		14	1	66297090	1296
ENSMUSG00000085984	processed_transcript	1700001G11Rik	ENSMUST00000153646	processed_transcript		14	-1	66297129	764
ENSMUSG00000085984	processed_transcript	1700001G11Rik	ENSMUST00000145637	processed_transcript		14	-1	66296940	759
ENSMUSG00000085984	processed_transcript	1700001G11Rik	ENSMUST00000143392	processed_transcript		14	-1	66296883	673
ENSMUSG00000028114	protein_coding	Mettl14	ENSMUST00000090371	protein_coding		3	-1	123385931	7197
ENSMUSG00000028114	protein_coding	Mettl14	ENSMUST00000174323	protein_coding		3	-1	123385985	4202
ENSMUSG00000028114	protein_coding	Mettl14	ENSMUST00000029759	protein_coding	principal1	3	-1	123386108	2741
ENSMUSG00000028114	protein_coding	Mettl14	ENSMUST00000174006	protein_coding		3	-1	123374831	634
ENSMUSG00000028114	protein_coding	Mettl14	ENSMUST00000197628	retained_intron		3	-1	123386098	382
ENSMUSG00000118457	unitary_pseudogene	Gm46575	ENSMUST00000238696	unitary_pseudogene		17	-1	57267922	892
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111654	retained_intron		19	1	55741884	3059
ENSMUSG00000027596	protein_coding	a	ENSMUST00000137333	protein_coding		2	1	154791402	526
ENSMUSG00000027596	protein_coding	a	ENSMUST00000132342	processed_transcript		2	1	154951180	231
ENSMUSG00000027596	protein_coding	a	ENSMUST00000109697	protein_coding	principal1	2	1	154951219	705
ENSMUSG00000027596	protein_coding	a	ENSMUST00000148402	protein_coding		2	1	155013472	398
ENSMUSG00000102523	TEC	Gm37783	ENSMUST00000192025	TEC		1	1	194650319	1856
ENSMUSG00000103776	TEC	2900035J10Rik	ENSMUST00000194966	TEC		1	1	194732707	532
ENSMUSG00000002332	protein_coding	Dhrs1	ENSMUST00000155969	retained_intron		14	-1	55739660	510
ENSMUSG00000027596	protein_coding	a	ENSMUST00000029123	protein_coding	principal1	2	1	155013531	731
ENSMUSG00000102841	TEC	Gm38036	ENSMUST00000194586	TEC		1	1	194677002	3564
ENSMUSG00000002332	protein_coding	Dhrs1	ENSMUST00000128802	retained_intron		14	-1	55745599	2502
ENSMUSG00000026640	protein_coding	Plxna2	ENSMUST00000194398	retained_intron		1	1	194618218	2650
ENSMUSG00000027596	protein_coding	a	ENSMUST00000148300	retained_intron		2	1	155047615	510
ENSMUSG00000002332	protein_coding	Dhrs1	ENSMUST00000002403	protein_coding	principal1	14	-1	55745690	1477
ENSMUSG00000002332	protein_coding	Dhrs1	ENSMUST00000142043	retained_intron		14	-1	55740144	477
ENSMUSG00000024972	protein_coding	Lgals12	ENSMUST00000099729	protein_coding	principal1	19	-1	7607178	2757
ENSMUSG00000024972	protein_coding	Lgals12	ENSMUST00000159983	protein_coding	principal1	19	-1	7607193	2470
ENSMUSG00000024972	protein_coding	Lgals12	ENSMUST00000079902	protein_coding		19	-1	7607103	2590
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111658	protein_coding		19	1	55741884	3012
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111659	protein_coding		19	1	55742058	2324
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111652	retained_intron		19	1	55742242	1087
ENSMUSG00000026640	protein_coding	Plxna2	ENSMUST00000027952	protein_coding	principal1	1	1	194619825	11040
ENSMUSG00000026640	protein_coding	Plxna2	ENSMUST00000125381	processed_transcript		1	1	194644856	3951
ENSMUSG00000026640	protein_coding	Plxna2	ENSMUST00000135664	nonsense_mediated_decay		1	1	194764567	605
ENSMUSG00000026640	protein_coding	Plxna2	ENSMUST00000124785	retained_intron		1	1	194804710	3180
ENSMUSG00000102621	TEC	Gm37674	ENSMUST00000194177	TEC		1	1	194669673	1834
ENSMUSG00000046196	protein_coding	Ttc39d	ENSMUST00000134652	protein_coding	principal1	17	1	80207460	2438
ENSMUSG00000046196	protein_coding	Ttc39d	ENSMUST00000053168	protein_coding	principal1	17	1	80215914	2022
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111649	retained_intron		19	1	55742243	982
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111651	retained_intron		19	1	55742243	1127
ENSMUSG00000114618	lincRNA	Gm41183	ENSMUST00000225213	lincRNA		14	-1	66341229	2360
ENSMUSG00000055760	protein_coding	Gemin6	ENSMUST00000156869	processed_transcript		17	1	80224441	668
ENSMUSG00000055760	protein_coding	Gemin6	ENSMUST00000069486	protein_coding	principal1	17	1	80224441	1134
ENSMUSG00000028463	protein_coding	Car9	ENSMUST00000030183	protein_coding	principal1	4	1	43506966	2023
ENSMUSG00000031312	protein_coding	Itgb1bp2	ENSMUST00000033674	protein_coding	principal1	X	1	101449088	1314
ENSMUSG00000031312	protein_coding	Itgb1bp2	ENSMUST00000143946	retained_intron		X	1	101452111	775
ENSMUSG00000028463	protein_coding	Car9	ENSMUST00000124114	processed_transcript		4	1	43507024	1667
ENSMUSG00000083897	processed_pseudogene	Gm14843	ENSMUST00000119596	processed_pseudogene		X	1	101479348	212
ENSMUSG00000028463	protein_coding	Car9	ENSMUST00000138073	protein_coding		4	1	43507312	712
ENSMUSG00000081674	processed_pseudogene	Gm6184	ENSMUST00000120403	processed_pseudogene		X	1	101518985	1261
ENSMUSG00000028463	protein_coding	Car9	ENSMUST00000128232	processed_transcript		4	1	43507877	334
ENSMUSG00000028463	protein_coding	Car9	ENSMUST00000126750	processed_transcript		4	1	43508543	374
ENSMUSG00000028463	protein_coding	Car9	ENSMUST00000129996	processed_transcript		4	1	43508937	480
ENSMUSG00000028463	protein_coding	Car9	ENSMUST00000154251	processed_transcript		4	1	43512132	398
ENSMUSG00000087142	antisense	Gm12454	ENSMUST00000149817	antisense		4	-1	43508724	404
ENSMUSG00000087142	antisense	Gm12454	ENSMUST00000139119	antisense		4	-1	43508747	978
ENSMUSG00000031298	protein_coding	Adgrg2	ENSMUST00000112400	protein_coding	principal4	X	1	160390725	4682
ENSMUSG00000031298	protein_coding	Adgrg2	ENSMUST00000112402	protein_coding	alternative2	X	1	160390724	4641
ENSMUSG00000031298	protein_coding	Adgrg2	ENSMUST00000112401	protein_coding	alternative2	X	1	160390724	4632
ENSMUSG00000031298	protein_coding	Adgrg2	ENSMUST00000112408	protein_coding	alternative2	X	1	160390690	4708
ENSMUSG00000031298	protein_coding	Adgrg2	ENSMUST00000112405	protein_coding	alternative2	X	1	160390725	4634
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000153888	protein_coding		19	1	55742264	2318
ENSMUSG00000031298	protein_coding	Adgrg2	ENSMUST00000112404	protein_coding	alternative2	X	1	160390725	4601
ENSMUSG00000031298	protein_coding	Adgrg2	ENSMUST00000112398	protein_coding	alternative2	X	1	160427292	3418
ENSMUSG00000031298	protein_coding	Adgrg2	ENSMUST00000146805	protein_coding		X	1	160390728	384
ENSMUSG00000031298	protein_coding	Adgrg2	ENSMUST00000123450	retained_intron		X	1	160390728	531
ENSMUSG00000111819	processed_pseudogene	Gm47110	ENSMUST00000216655	processed_pseudogene		9	1	67700181	405
ENSMUSG00000111272	processed_pseudogene	Gm7787	ENSMUST00000216858	processed_pseudogene		9	-1	67748764	688
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000127233	protein_coding		19	1	55742267	3220
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000126434	retained_intron		19	1	55742269	2683
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111653	retained_intron		19	1	55742269	2629
ENSMUSG00000091956	protein_coding	C2cd4b	ENSMUST00000171652	protein_coding	principal1	9	1	67759437	1327
ENSMUSG00000055125	lincRNA	M5C1000I18Rik	ENSMUST00000068526	lincRNA		9	-1	67760208	1497
ENSMUSG00000055125	lincRNA	M5C1000I18Rik	ENSMUST00000186205	lincRNA		9	-1	67760230	1414
ENSMUSG00000055125	lincRNA	M5C1000I18Rik	ENSMUST00000196844	lincRNA		9	-1	67760208	1496
ENSMUSG00000105504	protein_coding	Gbp5	ENSMUST00000198803	processed_transcript		3	1	142493978	1836
ENSMUSG00000047990	protein_coding	C2cd4a	ENSMUST00000054500	protein_coding	principal1	9	-1	67832330	1395
ENSMUSG00000027593	protein_coding	Raly	ENSMUST00000109701	protein_coding	principal3	2	1	154791096	1709
ENSMUSG00000034333	protein_coding	Zbed4	ENSMUST00000041297	protein_coding	principal1	15	1	88751660	5425
ENSMUSG00000105504	protein_coding	Gbp5	ENSMUST00000090127	protein_coding	principal1	3	1	142496900	3055
ENSMUSG00000034333	protein_coding	Zbed4	ENSMUST00000160975	processed_transcript		15	1	88751760	556
ENSMUSG00000105504	protein_coding	Gbp5	ENSMUST00000196255	nonsense_mediated_decay		3	1	142496934	3756
ENSMUSG00000027593	protein_coding	Raly	ENSMUST00000129137	protein_coding		2	1	154791106	851
ENSMUSG00000105504	protein_coding	Gbp5	ENSMUST00000197459	nonsense_mediated_decay		3	1	142496942	3303
ENSMUSG00000027593	protein_coding	Raly	ENSMUST00000125872	protein_coding		2	1	154791118	546
ENSMUSG00000105504	protein_coding	Gbp5	ENSMUST00000199578	retained_intron		3	1	142502796	3507
ENSMUSG00000027593	protein_coding	Raly	ENSMUST00000029120	protein_coding	alternative2	2	1	154791133	1802
ENSMUSG00000028268	protein_coding	Gbp3	ENSMUST00000199325	protein_coding		3	1	142560026	649
ENSMUSG00000027593	protein_coding	Raly	ENSMUST00000058089	protein_coding	principal3	2	1	154791157	1747
ENSMUSG00000027593	protein_coding	Raly	ENSMUST00000140713	protein_coding		2	1	154791352	1100
ENSMUSG00000027593	protein_coding	Raly	ENSMUST00000152038	processed_transcript		2	1	154791354	1574
ENSMUSG00000027593	protein_coding	Raly	ENSMUST00000145202	processed_transcript		2	1	154791369	402
ENSMUSG00000027593	protein_coding	Raly	ENSMUST00000151578	processed_transcript		2	1	154791715	337
ENSMUSG00000027593	protein_coding	Raly	ENSMUST00000116389	protein_coding	alternative2	2	1	154791110	1759
ENSMUSG00000028268	protein_coding	Gbp3	ENSMUST00000106222	protein_coding	principal1	3	1	142560052	2629
ENSMUSG00000028268	protein_coding	Gbp3	ENSMUST00000128609	protein_coding		3	1	142560143	627
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000061496	protein_coding	principal3	19	1	55742269	3193
ENSMUSG00000028268	protein_coding	Gbp3	ENSMUST00000029935	protein_coding	principal1	3	1	142560145	2681
ENSMUSG00000028268	protein_coding	Gbp3	ENSMUST00000142731	processed_transcript		3	1	142560175	943
ENSMUSG00000028268	protein_coding	Gbp3	ENSMUST00000106221	protein_coding	principal1	3	1	142560411	2682
ENSMUSG00000028268	protein_coding	Gbp3	ENSMUST00000142060	protein_coding		3	1	142561234	477
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111656	protein_coding	alternative2	19	1	55742332	3629
ENSMUSG00000074656	protein_coding	Eif2s2	ENSMUST00000099173	protein_coding	principal1	2	-1	154892935	2542
ENSMUSG00000040253	protein_coding	Gbp7	ENSMUST00000171263	protein_coding	principal1	3	1	142530342	2497
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111657	protein_coding		19	1	55742342	2135
ENSMUSG00000074656	protein_coding	Eif2s2	ENSMUST00000147136	retained_intron		2	-1	154892831	3785
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000133008	retained_intron		19	1	55742845	691
ENSMUSG00000040253	protein_coding	Gbp7	ENSMUST00000045097	protein_coding	principal1	3	1	142530342	5614
ENSMUSG00000074656	protein_coding	Eif2s2	ENSMUST00000161172	protein_coding		2	-1	154892795	1041
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000145249	processed_transcript		19	1	55893352	830
ENSMUSG00000074656	protein_coding	Eif2s2	ENSMUST00000135524	retained_intron		2	-1	154892808	4102
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000142291	protein_coding		19	1	55894534	729
ENSMUSG00000105338	processed_pseudogene	Gm43802	ENSMUST00000197826	processed_pseudogene		3	1	142547882	637
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000026292	protein_coding	principal2	X	1	151803327	14579
ENSMUSG00000074656	protein_coding	Eif2s2	ENSMUST00000166171	protein_coding	principal1	2	-1	154892782	2312
ENSMUSG00000084897	protein_coding	Gm14226	ENSMUST00000130870	protein_coding	principal1	2	1	155018266	3243
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000131786	retained_intron		X	1	151803347	2627
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000130243	retained_intron		X	1	151803347	5010
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111646	protein_coding		19	1	55895510	2839
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000156616	protein_coding		X	1	151803658	570
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000127653	processed_transcript		19	1	55895662	395
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000138566	nonsense_mediated_decay		X	1	151803662	644
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000143334	processed_transcript		19	1	55898309	746
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000148666	protein_coding		19	1	55898309	1044
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000147666	processed_transcript		X	1	151803662	3112
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000150020	retained_intron		X	1	151803662	3710
ENSMUSG00000094928	protein_coding	1700122O11Rik	ENSMUST00000178823	protein_coding	principal1	17	-1	48038293	771
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000112622	protein_coding	alternative2	X	1	151835248	14168
ENSMUSG00000024985	protein_coding	Tcf7l2	ENSMUST00000111662	protein_coding		19	1	55741820	3715
ENSMUSG00000117308	processed_pseudogene	Gm20596	ENSMUST00000233100	processed_pseudogene		17	-1	48056147	153
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000239245	protein_coding		X	1	151856806	678
ENSMUSG00000040264	protein_coding	Gbp2b	ENSMUST00000029936	protein_coding	principal1	3	1	142594847	2823
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000138023	nonsense_mediated_decay		X	1	151860167	3597
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000123306	nonsense_mediated_decay		X	1	151864562	673
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000150882	processed_transcript		X	1	151882586	252
ENSMUSG00000110462	lincRNA	Gm35572	ENSMUST00000212427	lincRNA		8	-1	71781322	2310
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000150426	retained_intron		X	1	151904994	901
ENSMUSG00000110473	processed_pseudogene	Gm29705	ENSMUST00000212598	processed_pseudogene		8	1	71760118	474
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000132453	retained_intron		X	1	151908845	896
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000139909	retained_intron		X	1	151908845	821
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000133051	retained_intron		X	1	151921282	418
ENSMUSG00000117334	antisense	A730006G06Rik	ENSMUST00000232692	antisense		17	-1	48090378	1829
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000130234	retained_intron		X	1	151921343	667
ENSMUSG00000025261	protein_coding	Huwe1	ENSMUST00000139245	retained_intron		X	1	151924258	621
ENSMUSG00000021545	protein_coding	1700067P10Rik	ENSMUST00000022028	protein_coding	principal1	17	1	48089319	1105
ENSMUSG00000021545	protein_coding	1700067P10Rik	ENSMUST00000233043	protein_coding	principal1	17	1	48089682	1073
ENSMUSG00000092255	processed_transcript	Gm20455	ENSMUST00000174100	processed_transcript		X	1	73097187	1138
ENSMUSG00000117157	lincRNA	Gm49946	ENSMUST00000233338	lincRNA		17	1	48092779	1136
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000166468	protein_coding	principal2	10	1	28074820	6177
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000218359	protein_coding	alternative2	10	1	28074854	4669
ENSMUSG00000073386	protein_coding	9830107B12Rik	ENSMUST00000063481	protein_coding	principal2	17	-1	48146268	3600
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000218276	protein_coding	alternative2	10	1	28074854	4754
ENSMUSG00000073386	protein_coding	9830107B12Rik	ENSMUST00000233337	protein_coding	alternative2	17	-1	48146178	2921
ENSMUSG00000073386	protein_coding	9830107B12Rik	ENSMUST00000233614	protein_coding		17	-1	48146251	1871
ENSMUSG00000117266	processed_pseudogene	Gm49947	ENSMUST00000232753	processed_pseudogene		17	-1	48141903	180
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000219478	retained_intron		10	1	28074857	3960
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000218633	retained_intron		10	1	28074867	2986
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000219107	retained_intron		10	1	28074905	2364
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000218584	processed_transcript		10	1	28074922	2470
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000219761	retained_intron		10	1	28075010	1464
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000219621	protein_coding		10	1	28560151	392
ENSMUSG00000032382	protein_coding	Snx1	ENSMUST00000034946	protein_coding	principal1	9	-1	66124886	2073
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000220357	protein_coding		10	1	28580459	846
ENSMUSG00000019889	protein_coding	Ptprk	ENSMUST00000220404	retained_intron		10	1	28586993	2172
ENSMUSG00000032382	protein_coding	Snx1	ENSMUST00000132841	retained_intron		9	-1	66091347	827
ENSMUSG00000032382	protein_coding	Snx1	ENSMUST00000143148	retained_intron		9	-1	66096591	583
ENSMUSG00000032382	protein_coding	Snx1	ENSMUST00000139872	retained_intron		9	-1	66101698	654
ENSMUSG00000032382	protein_coding	Snx1	ENSMUST00000137542	protein_coding		9	-1	66126587	707
ENSMUSG00000032382	protein_coding	Snx1	ENSMUST00000146893	retained_intron		9	-1	66105724	666
ENSMUSG00000032382	protein_coding	Snx1	ENSMUST00000145449	retained_intron		9	-1	66124797	678
ENSMUSG00000089837	protein_coding	Npcd	ENSMUST00000023060	protein_coding	alternative2	15	-1	79834237	1162
ENSMUSG00000089837	protein_coding	Npcd	ENSMUST00000089299	protein_coding	principal4	15	-1	79834237	1453
ENSMUSG00000032381	protein_coding	Ciao2a	ENSMUST00000034945	protein_coding	principal1	9	1	66126611	1240
ENSMUSG00000029848	protein_coding	Stra8	ENSMUST00000031876	protein_coding	principal2	6	1	34920163	1803
ENSMUSG00000029848	protein_coding	Stra8	ENSMUST00000185102	protein_coding		6	1	34921004	495
ENSMUSG00000029848	protein_coding	Stra8	ENSMUST00000114997	protein_coding	alternative2	6	1	34921010	1207
ENSMUSG00000029848	protein_coding	Stra8	ENSMUST00000114999	protein_coding	principal2	6	1	34920960	1455
ENSMUSG00000085861	protein_coding	Armh2	ENSMUST00000136906	protein_coding	principal1	13	1	24741232	863
ENSMUSG00000081925	processed_pseudogene	Rpl31-ps22	ENSMUST00000117961	processed_pseudogene		15	1	84030339	337
ENSMUSG00000024973	protein_coding	Plaat5	ENSMUST00000131326	retained_intron		19	1	7612541	595
ENSMUSG00000089715	protein_coding	Cbx6	ENSMUST00000109627	protein_coding	principal2	15	-1	79834688	5806
ENSMUSG00000089715	protein_coding	Cbx6	ENSMUST00000230681	retained_intron		15	-1	79833949	7850
ENSMUSG00000089715	protein_coding	Cbx6	ENSMUST00000109625	protein_coding	alternative2	15	-1	79834237	3056
ENSMUSG00000089715	protein_coding	Cbx6	ENSMUST00000109623	protein_coding		15	-1	79834226	996
ENSMUSG00000089715	protein_coding	Cbx6	ENSMUST00000141345	processed_transcript		15	-1	79833798	386
ENSMUSG00000089715	protein_coding	Cbx6	ENSMUST00000148358	protein_coding		15	-1	79834280	450
ENSMUSG00000035284	protein_coding	Vps13c	ENSMUST00000077879	protein_coding	principal1	9	1	67840396	11527
ENSMUSG00000024973	protein_coding	Plaat5	ENSMUST00000025929	protein_coding	alternative2	19	1	7612555	1063
ENSMUSG00000089715	protein_coding	Cbx6	ENSMUST00000127721	processed_transcript		15	-1	79834325	546
ENSMUSG00000024973	protein_coding	Plaat5	ENSMUST00000148558	protein_coding		19	1	7612605	1027
ENSMUSG00000035284	protein_coding	Vps13c	ENSMUST00000217386	nonsense_mediated_decay		9	1	67840412	2669
ENSMUSG00000089715	protein_coding	Cbx6	ENSMUST00000129614	processed_transcript		15	-1	79834274	576
ENSMUSG00000024973	protein_coding	Plaat5	ENSMUST00000239394	protein_coding	principal2	19	1	7612569	1044
ENSMUSG00000035284	protein_coding	Vps13c	ENSMUST00000213168	protein_coding		9	1	67953788	5945
ENSMUSG00000035284	protein_coding	Vps13c	ENSMUST00000216856	retained_intron		9	1	67971954	1476
ENSMUSG00000035284	protein_coding	Vps13c	ENSMUST00000215524	nonsense_mediated_decay		9	1	67975816	933
ENSMUSG00000035845	protein_coding	Alg12	ENSMUST00000160222	retained_intron		15	-1	88816171	2060
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000213663	protein_coding		9	1	113741473	2727
ENSMUSG00000097226	antisense	Gm26600	ENSMUST00000181637	antisense		7	1	19770611	1256
ENSMUSG00000109136	TEC	Gm45114	ENSMUST00000208280	TEC		7	-1	19762254	1349
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000216817	protein_coding		9	1	113741512	2234
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000216280	processed_transcript		9	1	113741732	1927
ENSMUSG00000022441	protein_coding	Efcab6	ENSMUST00000156187	protein_coding	principal1	15	-1	84065349	5012
ENSMUSG00000022421	protein_coding	Nptxr	ENSMUST00000023057	protein_coding	alternative2	15	-1	79804766	5006
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000213902	retained_intron		9	1	113793326	4655
ENSMUSG00000022421	protein_coding	Nptxr	ENSMUST00000125283	processed_transcript		15	-1	79790981	999
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000213966	processed_transcript		9	1	113793335	1487
ENSMUSG00000022421	protein_coding	Nptxr	ENSMUST00000175858	protein_coding	principal2	15	-1	79804709	4948
ENSMUSG00000103597	processed_pseudogene	Gm19777	ENSMUST00000191940	processed_pseudogene		1	-1	194820087	358
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000214860	retained_intron		9	1	113812586	2773
ENSMUSG00000022441	protein_coding	Efcab6	ENSMUST00000144169	processed_transcript		15	-1	83919477	2495
ENSMUSG00000022441	protein_coding	Efcab6	ENSMUST00000143592	retained_intron		15	-1	83936095	2850
ENSMUSG00000022441	protein_coding	Efcab6	ENSMUST00000130551	processed_transcript		15	-1	83883641	594
ENSMUSG00000022441	protein_coding	Efcab6	ENSMUST00000163773	nonsense_mediated_decay		15	-1	83946599	368
ENSMUSG00000022441	protein_coding	Efcab6	ENSMUST00000149563	processed_transcript		15	-1	83967842	652
ENSMUSG00000022441	protein_coding	Efcab6	ENSMUST00000140633	processed_transcript		15	-1	83988982	700
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000027766	protein_coding	principal1	1	-1	180196020	4026
ENSMUSG00000022441	protein_coding	Efcab6	ENSMUST00000122836	processed_transcript		15	-1	84065379	381
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000160879	protein_coding		1	-1	180195938	561
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000161300	protein_coding		1	-1	180178631	1224
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000160169	nonsense_mediated_decay		1	-1	180195981	728
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000162769	protein_coding		1	-1	180195961	453
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000161632	nonsense_mediated_decay		1	-1	180182097	795
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000159591	retained_intron		1	-1	180178922	597
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000161379	protein_coding		1	-1	180195961	367
ENSMUSG00000002980	protein_coding	Bcam	ENSMUST00000003061	protein_coding	principal1	7	-1	19770547	2429
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000160482	protein_coding		1	-1	180193483	447
ENSMUSG00000002980	protein_coding	Bcam	ENSMUST00000135632	retained_intron		7	-1	19756951	307
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000161814	protein_coding		1	-1	180196075	470
ENSMUSG00000002980	protein_coding	Bcam	ENSMUST00000133271	retained_intron		7	-1	19770495	1449
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000162725	protein_coding		1	-1	180182800	673
ENSMUSG00000002980	protein_coding	Bcam	ENSMUST00000155244	protein_coding		7	-1	19771016	807
ENSMUSG00000002980	protein_coding	Bcam	ENSMUST00000133427	nonsense_mediated_decay		7	-1	19770495	341
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000160121	nonsense_mediated_decay		1	-1	180195972	528
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000159914	protein_coding		1	-1	180193662	386
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000160102	nonsense_mediated_decay		1	-1	180195972	468
ENSMUSG00000024761	processed_pseudogene	Gm16437	ENSMUST00000025669	processed_pseudogene		19	1	7668287	504
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000161743	protein_coding		1	-1	180199602	339
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000161746	protein_coding		1	-1	180195902	202
ENSMUSG00000026489	protein_coding	Coq8a	ENSMUST00000170472	protein_coding	principal1	1	-1	180193485	3928
ENSMUSG00000035845	protein_coding	Alg12	ENSMUST00000162183	protein_coding	principal1	15	-1	88819318	2130
ENSMUSG00000085274	processed_transcript	BC046401	ENSMUST00000155786	processed_transcript		2	1	165857684	847
ENSMUSG00000035845	protein_coding	Alg12	ENSMUST00000043087	protein_coding		15	-1	88819285	1793
ENSMUSG00000035845	protein_coding	Alg12	ENSMUST00000159328	protein_coding		15	-1	88819092	661
ENSMUSG00000111841	lincRNA	Gm20745	ENSMUST00000216827	lincRNA		9	-1	68025714	3796
ENSMUSG00000101345	lincRNA	Gm28195	ENSMUST00000186992	lincRNA		9	1	68235029	372
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000150871	processed_transcript		2	-1	165876600	515
ENSMUSG00000111562	processed_pseudogene	Gm19987	ENSMUST00000216339	processed_pseudogene		9	-1	68421904	499
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000124085	retained_intron		2	-1	165884239	960
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000146204	processed_transcript		2	-1	165879902	527
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000139202	processed_transcript		2	-1	165852122	434
ENSMUSG00000111303	lincRNA	4930502A04Rik	ENSMUST00000214059	lincRNA		9	-1	68520200	865
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000150564	processed_transcript		2	-1	165884210	300
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000148674	retained_intron		2	-1	165884751	663
ENSMUSG00000111404	processed_pseudogene	Gm47169	ENSMUST00000216343	processed_pseudogene		9	1	68552395	162
ENSMUSG00000090264	protein_coding	Eif4ebp3	ENSMUST00000036765	protein_coding	principal1	18	1	36664060	744
ENSMUSG00000023272	protein_coding	Creld2	ENSMUST00000024042	protein_coding	principal1	15	1	88819646	1366
ENSMUSG00000032380	protein_coding	Dapk2	ENSMUST00000034944	protein_coding	principal1	9	1	66158223	1772
ENSMUSG00000032380	protein_coding	Dapk2	ENSMUST00000238682	protein_coding		9	1	66158226	1594
ENSMUSG00000032380	protein_coding	Dapk2	ENSMUST00000129442	retained_intron		9	1	66158235	1751
ENSMUSG00000032380	protein_coding	Dapk2	ENSMUST00000132987	nonsense_mediated_decay		9	1	66220747	837
ENSMUSG00000032380	protein_coding	Dapk2	ENSMUST00000129778	retained_intron		9	1	66268374	568
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000134146	protein_coding		18	1	36559987	641
ENSMUSG00000082778	processed_pseudogene	Gm15191	ENSMUST00000117933	processed_pseudogene		X	1	151945368	1000
ENSMUSG00000115016	processed_transcript	AA536875	ENSMUST00000228377	lincRNA		14	1	123043282	901
ENSMUSG00000035828	protein_coding	Pim3	ENSMUST00000042818	protein_coding	principal1	15	1	88862186	2427
ENSMUSG00000035828	protein_coding	Pim3	ENSMUST00000229969	processed_transcript		15	1	88864920	522
ENSMUSG00000115016	processed_transcript	AA536875	ENSMUST00000226639	lincRNA		14	1	123168503	616
ENSMUSG00000115016	processed_transcript	AA536875	ENSMUST00000227709	lincRNA		14	1	123169182	1741
ENSMUSG00000115016	processed_transcript	AA536875	ENSMUST00000226966	retained_intron		14	1	123169213	522
ENSMUSG00000115016	processed_transcript	AA536875	ENSMUST00000227339	lincRNA		14	1	123169262	1876
ENSMUSG00000115016	processed_transcript	AA536875	ENSMUST00000226524	lincRNA		14	1	123169294	697
ENSMUSG00000115758	processed_pseudogene	Gm49294	ENSMUST00000226283	processed_pseudogene		14	-1	123165485	184
ENSMUSG00000086648	antisense	Gm15511	ENSMUST00000152570	antisense		9	-1	69364247	557
ENSMUSG00000032238	protein_coding	Rora	ENSMUST00000140351	processed_transcript		9	1	68653786	1422
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000006205	nonsense_mediated_decay		18	1	36560611	8200
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000155329	protein_coding	principal1	18	1	36560611	8223
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000088113	protein_coding	alternative2	2	-1	165884874	3757
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000143966	retained_intron		18	1	36581077	520
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000152060	protein_coding		18	1	36600800	1005
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000142780	processed_transcript		18	1	36606193	1033
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000109269	protein_coding	alternative2	2	-1	165878437	6188
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000136030	protein_coding		18	1	36613909	658
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000156424	retained_intron		18	1	36614312	610
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000130035	nonsense_mediated_decay		18	1	36638324	603
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000153612	nonsense_mediated_decay		18	1	36638548	523
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000152940	retained_intron		18	1	36641373	500
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000037072	protein_coding		18	1	36644298	3518
ENSMUSG00000024483	protein_coding	Ankhd1	ENSMUST00000116653	protein_coding		18	1	36655510	860
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000152682	processed_transcript		2	-1	165884648	3817
ENSMUSG00000032238	protein_coding	Rora	ENSMUST00000034766	protein_coding		9	1	68653786	10878
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000109262	protein_coding		2	-1	165896950	2515
ENSMUSG00000032238	protein_coding	Rora	ENSMUST00000174296	nonsense_mediated_decay		9	1	68653891	751
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000136842	protein_coding		2	-1	165899016	629
ENSMUSG00000032238	protein_coding	Rora	ENSMUST00000143507	processed_transcript		9	1	68655303	508
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000144530	protein_coding		2	-1	165876408	311
ENSMUSG00000032238	protein_coding	Rora	ENSMUST00000132355	processed_transcript		9	1	69195541	561
ENSMUSG00000032238	protein_coding	Rora	ENSMUST00000113624	protein_coding	principal1	9	1	69289682	2591
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000153655	protein_coding		2	-1	165875777	2484
ENSMUSG00000025260	protein_coding	Hsd17b10	ENSMUST00000026289	protein_coding	principal1	X	1	152001845	962
ENSMUSG00000117942	protein_coding	Maskbp3	ENSMUST00000140061	protein_coding	principal1	18	1	36647860	2235
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000018050	protein_coding	alternative2	2	-1	165884772	4130
ENSMUSG00000025260	protein_coding	Hsd17b10	ENSMUST00000112617	protein_coding		X	1	152001845	992
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000099084	protein_coding	alternative2	2	-1	165882278	5232
ENSMUSG00000085172	processed_pseudogene	Gm6542	ENSMUST00000153606	processed_pseudogene		18	1	36609958	772
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000139907	processed_transcript		2	-1	165862005	584
ENSMUSG00000025260	protein_coding	Hsd17b10	ENSMUST00000151200	processed_transcript		X	1	152002149	1001
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000149369	processed_transcript		2	-1	165858173	990
ENSMUSG00000025260	protein_coding	Hsd17b10	ENSMUST00000140804	retained_intron		X	1	152003397	878
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000134557	retained_intron		2	-1	165876190	725
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000177633	protein_coding	alternative2	2	-1	165884751	5093
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000170272	protein_coding	alternative2	2	-1	165882278	5076
ENSMUSG00000039671	protein_coding	Zmynd8	ENSMUST00000109266	protein_coding	principal4	2	-1	165858173	5072
ENSMUSG00000086820	antisense	Gm11465	ENSMUST00000127942	antisense		2	1	165880025	435
ENSMUSG00000025257	protein_coding	Ribc1	ENSMUST00000026288	protein_coding	principal1	X	-1	152016295	1508
ENSMUSG00000025257	protein_coding	Ribc1	ENSMUST00000133517	processed_transcript		X	-1	152016270	205
ENSMUSG00000029847	protein_coding	Slc23a4	ENSMUST00000044387	protein_coding		6	-1	34977999	2175
ENSMUSG00000029847	protein_coding	Slc23a4	ENSMUST00000201355	protein_coding	principal1	6	-1	34988404	2003
ENSMUSG00000029847	protein_coding	Slc23a4	ENSMUST00000134874	processed_transcript		6	-1	34948577	981
ENSMUSG00000029847	protein_coding	Slc23a4	ENSMUST00000147169	protein_coding		6	-1	34955903	681
ENSMUSG00000029847	protein_coding	Slc23a4	ENSMUST00000144079	protein_coding		6	-1	34979054	1104
ENSMUSG00000018865	protein_coding	Sult4a1	ENSMUST00000082365	protein_coding	principal1	15	-1	84105754	2383
ENSMUSG00000018865	protein_coding	Sult4a1	ENSMUST00000229826	protein_coding		15	-1	84105609	1319
ENSMUSG00000116072	lincRNA	Gm46526	ENSMUST00000229889	lincRNA		15	1	84106658	282
ENSMUSG00000013465	protein_coding	Nelfb	ENSMUST00000059849	protein_coding	principal1	2	-1	25211489	2637
ENSMUSG00000013465	protein_coding	Nelfb	ENSMUST00000128876	retained_intron		2	-1	25211381	2754
ENSMUSG00000013465	protein_coding	Nelfb	ENSMUST00000129140	retained_intron		2	-1	25203793	1233
ENSMUSG00000013465	protein_coding	Nelfb	ENSMUST00000124900	protein_coding		2	-1	25203921	432
ENSMUSG00000013465	protein_coding	Nelfb	ENSMUST00000146729	retained_intron		2	-1	25203601	494
ENSMUSG00000013465	protein_coding	Nelfb	ENSMUST00000140934	protein_coding		2	-1	25210726	612
ENSMUSG00000013465	protein_coding	Nelfb	ENSMUST00000138199	processed_transcript		2	-1	25210074	552
ENSMUSG00000013465	protein_coding	Nelfb	ENSMUST00000147890	retained_intron		2	-1	25210700	753
ENSMUSG00000018868	protein_coding	Pnpla5	ENSMUST00000230566	protein_coding	alternative2	15	-1	84123175	2172
ENSMUSG00000018868	protein_coding	Pnpla5	ENSMUST00000019012	protein_coding	principal2	15	-1	84123175	1694
ENSMUSG00000083160	processed_pseudogene	Gm15967	ENSMUST00000120027	processed_pseudogene		19	-1	7697014	1116
ENSMUSG00000081596	processed_pseudogene	Gm15968	ENSMUST00000119342	processed_pseudogene		19	-1	7705113	1168
ENSMUSG00000024757	protein_coding	Slc22a19	ENSMUST00000025666	protein_coding	principal1	19	-1	7711310	1998
ENSMUSG00000024757	protein_coding	Slc22a19	ENSMUST00000138317	retained_intron		19	-1	7711279	1853
ENSMUSG00000024757	protein_coding	Slc22a19	ENSMUST00000141771	retained_intron		19	-1	7711310	3574
ENSMUSG00000083474	processed_pseudogene	Gm15267	ENSMUST00000120888	processed_pseudogene		X	-1	152043512	464
ENSMUSG00000041133	protein_coding	Smc1a	ENSMUST00000145518	nonsense_mediated_decay		X	1	152016428	1824
ENSMUSG00000041133	protein_coding	Smc1a	ENSMUST00000045312	protein_coding	principal1	X	1	152016428	4691
ENSMUSG00000041133	protein_coding	Smc1a	ENSMUST00000135172	retained_intron		X	1	152036447	617
ENSMUSG00000041133	protein_coding	Smc1a	ENSMUST00000131395	retained_intron		X	1	152046628	499
ENSMUSG00000041133	protein_coding	Smc1a	ENSMUST00000124681	retained_intron		X	1	152058467	620
ENSMUSG00000041133	protein_coding	Smc1a	ENSMUST00000141457	retained_intron		X	1	152059075	591
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000149964	protein_coding	principal2	2	-1	181135214	8209
ENSMUSG00000020273	protein_coding	Papolg	ENSMUST00000020513	protein_coding	principal1	11	-1	23895253	3747
ENSMUSG00000020273	protein_coding	Papolg	ENSMUST00000102863	protein_coding		11	-1	23895236	2171
ENSMUSG00000020273	protein_coding	Papolg	ENSMUST00000145013	protein_coding		11	-1	23868470	1882
ENSMUSG00000020273	protein_coding	Papolg	ENSMUST00000150711	processed_transcript		11	-1	23891904	1882
ENSMUSG00000084769	antisense	Gm12061	ENSMUST00000151881	antisense		11	1	23894560	479
ENSMUSG00000117937	processed_pseudogene	Gm8157	ENSMUST00000235666	processed_pseudogene		19	-1	7727664	480
ENSMUSG00000031295	protein_coding	Phka2	ENSMUST00000033652	protein_coding	principal3	X	1	160502434	4133
ENSMUSG00000040525	protein_coding	Cblc	ENSMUST00000125050	processed_transcript		7	-1	19789059	739
ENSMUSG00000040525	protein_coding	Cblc	ENSMUST00000148416	processed_transcript		7	-1	19785440	635
ENSMUSG00000041268	protein_coding	Dmxl2	ENSMUST00000118163	protein_coding	principal2	9	-1	54501626	10614
ENSMUSG00000031295	protein_coding	Phka2	ENSMUST00000112377	protein_coding	principal3	X	1	160502166	3947
ENSMUSG00000041268	protein_coding	Dmxl2	ENSMUST00000154092	retained_intron		9	-1	54381893	4039
ENSMUSG00000031295	protein_coding	Phka2	ENSMUST00000146752	retained_intron		X	1	160502434	1644
ENSMUSG00000041268	protein_coding	Dmxl2	ENSMUST00000123709	protein_coding		9	-1	54445420	7865
ENSMUSG00000031295	protein_coding	Phka2	ENSMUST00000131765	processed_transcript		X	1	160523348	584
ENSMUSG00000041268	protein_coding	Dmxl2	ENSMUST00000118600	protein_coding	alternative2	9	-1	54501496	9465
ENSMUSG00000031295	protein_coding	Phka2	ENSMUST00000154142	processed_transcript		X	1	160523358	499
ENSMUSG00000000197	protein_coding	Nalcn	ENSMUST00000000201	protein_coding	principal1	14	-1	123627144	7122
ENSMUSG00000031295	protein_coding	Phka2	ENSMUST00000139496	processed_transcript		X	1	160530894	3424
ENSMUSG00000041268	protein_coding	Dmxl2	ENSMUST00000127880	protein_coding		9	-1	54474183	4288
ENSMUSG00000031295	protein_coding	Phka2	ENSMUST00000112376	protein_coding		X	1	160502465	2310
ENSMUSG00000031295	protein_coding	Phka2	ENSMUST00000153907	processed_transcript		X	1	160557787	250
ENSMUSG00000031295	protein_coding	Phka2	ENSMUST00000139587	protein_coding		X	1	160502172	479
ENSMUSG00000041268	protein_coding	Dmxl2	ENSMUST00000144736	retained_intron		9	-1	54501571	2958
ENSMUSG00000041268	protein_coding	Dmxl2	ENSMUST00000128865	processed_transcript		9	-1	54447001	440
ENSMUSG00000031295	protein_coding	Phka2	ENSMUST00000112380	protein_coding	alternative2	X	1	160502434	4341
ENSMUSG00000041268	protein_coding	Dmxl2	ENSMUST00000149709	retained_intron		9	-1	54501626	1568
ENSMUSG00000085695	antisense	Gm15243	ENSMUST00000151101	antisense		X	-1	160533045	382
ENSMUSG00000093394	sense_overlapping	Gm20621	ENSMUST00000176618	sense_overlapping		15	-1	88891516	1234
ENSMUSG00000093394	sense_overlapping	Gm20621	ENSMUST00000177166	sense_overlapping		15	-1	88891525	730
ENSMUSG00000093394	sense_overlapping	Gm20621	ENSMUST00000176338	sense_overlapping		15	-1	88891483	485
ENSMUSG00000000197	protein_coding	Nalcn	ENSMUST00000228860	processed_transcript		14	-1	123627144	3802
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000006053	protein_coding	principal1	16	1	17619354	4623
ENSMUSG00000000197	protein_coding	Nalcn	ENSMUST00000227818	retained_intron		14	-1	123626876	3862
ENSMUSG00000000197	protein_coding	Nalcn	ENSMUST00000227541	retained_intron		14	-1	123371075	2307
ENSMUSG00000000197	protein_coding	Nalcn	ENSMUST00000226617	retained_intron		14	-1	123627136	2327
ENSMUSG00000000197	protein_coding	Nalcn	ENSMUST00000228789	retained_intron		14	-1	123626961	3933
ENSMUSG00000000197	protein_coding	Nalcn	ENSMUST00000228766	retained_intron		14	-1	123626961	2051
ENSMUSG00000115674	TEC	Gm49297	ENSMUST00000227636	TEC		14	-1	123389370	2805
ENSMUSG00000022388	protein_coding	Ttll8	ENSMUST00000177180	nonsense_mediated_decay		15	-1	88954418	2719
ENSMUSG00000115925	lincRNA	Gm33432	ENSMUST00000231019	lincRNA		15	1	84127304	1578
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000231311	protein_coding		16	1	17619357	509
ENSMUSG00000081306	unprocessed_pseudogene	Gm15266	ENSMUST00000119635	unprocessed_pseudogene		X	-1	152111461	255
ENSMUSG00000022388	protein_coding	Ttll8	ENSMUST00000109371	protein_coding	principal1	15	-1	88954410	2968
ENSMUSG00000022388	protein_coding	Ttll8	ENSMUST00000177254	nonsense_mediated_decay		15	-1	88954059	2556
ENSMUSG00000022388	protein_coding	Ttll8	ENSMUST00000137740	retained_intron		15	-1	88919868	690
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000016491	protein_coding		2	-1	181135300	3067
ENSMUSG00000040525	protein_coding	Cblc	ENSMUST00000108449	protein_coding		7	-1	19796793	1514
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000197015	protein_coding	alternative2	2	-1	181135127	8031
ENSMUSG00000040525	protein_coding	Cblc	ENSMUST00000043822	protein_coding	principal1	7	-1	19796809	1662
ENSMUSG00000040525	protein_coding	Cblc	ENSMUST00000145755	retained_intron		7	-1	19792245	497
ENSMUSG00000040525	protein_coding	Cblc	ENSMUST00000131276	processed_transcript		7	-1	19793216	746
ENSMUSG00000040525	protein_coding	Cblc	ENSMUST00000131602	retained_intron		7	-1	19796805	1052
ENSMUSG00000041653	protein_coding	Pnpla3	ENSMUST00000045289	protein_coding	principal1	15	1	84167837	1313
ENSMUSG00000041653	protein_coding	Pnpla3	ENSMUST00000230926	processed_transcript		15	1	84186014	303
ENSMUSG00000036770	protein_coding	Stpg3	ENSMUST00000155706	processed_transcript		2	-1	25213651	1329
ENSMUSG00000036770	protein_coding	Stpg3	ENSMUST00000124661	processed_transcript		2	-1	25214631	1870
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232185	processed_transcript		16	1	17619357	916
ENSMUSG00000022437	protein_coding	Samm50	ENSMUST00000023071	protein_coding	principal1	15	1	84192241	4629
ENSMUSG00000036770	protein_coding	Stpg3	ENSMUST00000114363	protein_coding	alternative2	2	-1	25214637	1234
ENSMUSG00000036770	protein_coding	Stpg3	ENSMUST00000149509	processed_transcript		2	-1	25214591	897
ENSMUSG00000036770	protein_coding	Stpg3	ENSMUST00000043774	protein_coding	principal2	2	-1	25214630	1430
ENSMUSG00000022437	protein_coding	Samm50	ENSMUST00000230659	retained_intron		15	1	84195799	1170
ENSMUSG00000084206	processed_pseudogene	Gm12062	ENSMUST00000117533	processed_pseudogene		11	-1	23928854	259
ENSMUSG00000022437	protein_coding	Samm50	ENSMUST00000229608	retained_intron		15	1	84200049	836
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000163476	protein_coding		16	1	17619357	4532
ENSMUSG00000022437	protein_coding	Samm50	ENSMUST00000230668	processed_transcript		15	1	84200787	700
ENSMUSG00000022437	protein_coding	Samm50	ENSMUST00000230830	processed_transcript		15	1	84201842	825
ENSMUSG00000022437	protein_coding	Samm50	ENSMUST00000230498	retained_intron		15	1	84201917	731
ENSMUSG00000055010	protein_coding	A830031A19Rik	ENSMUST00000068360	protein_coding	principal1	11	-1	24075054	757
ENSMUSG00000022437	protein_coding	Samm50	ENSMUST00000229751	retained_intron		15	1	84202225	734
ENSMUSG00000116227	processed_transcript	Gm49513	ENSMUST00000231124	processed_transcript		15	1	84181914	303
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000231257	protein_coding		16	1	17619360	497
ENSMUSG00000116041	processed_pseudogene	Gm20369	ENSMUST00000229976	processed_pseudogene		15	-1	84183015	307
ENSMUSG00000032235	protein_coding	Ice2	ENSMUST00000034761	protein_coding	principal1	9	1	69397906	4169
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000165363	protein_coding		16	1	17619360	3046
ENSMUSG00000032235	protein_coding	Ice2	ENSMUST00000142743	retained_intron		9	1	69397923	5475
ENSMUSG00000032235	protein_coding	Ice2	ENSMUST00000125938	protein_coding		9	1	69397927	438
ENSMUSG00000032235	protein_coding	Ice2	ENSMUST00000117610	protein_coding		9	1	69397933	800
ENSMUSG00000032235	protein_coding	Ice2	ENSMUST00000145538	protein_coding		9	1	69397935	479
ENSMUSG00000032235	protein_coding	Ice2	ENSMUST00000117246	protein_coding		9	1	69397937	1201
ENSMUSG00000032235	protein_coding	Ice2	ENSMUST00000131233	processed_transcript		9	1	69397957	411
ENSMUSG00000032235	protein_coding	Ice2	ENSMUST00000151667	retained_intron		9	1	69398648	610
ENSMUSG00000032235	protein_coding	Ice2	ENSMUST00000146368	processed_transcript		9	1	69416715	453
ENSMUSG00000032235	protein_coding	Ice2	ENSMUST00000147558	retained_intron		9	1	69416873	626
ENSMUSG00000053303	protein_coding	Slc22a26	ENSMUST00000120522	protein_coding		19	-1	7802578	2854
ENSMUSG00000111621	processed_pseudogene	Gm7802	ENSMUST00000216464	processed_pseudogene		9	-1	69437247	262
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000231949	retained_intron		16	1	17619363	626
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232578	retained_intron		16	1	17619363	2915
ENSMUSG00000111484	processed_pseudogene	Gm18587	ENSMUST00000213736	processed_pseudogene		9	1	69444963	841
ENSMUSG00000053303	protein_coding	Slc22a26	ENSMUST00000065634	protein_coding	principal1	19	-1	7802667	2007
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232043	protein_coding		16	1	17619363	460
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000090159	protein_coding		16	1	17619363	4565
ENSMUSG00000085167	lincRNA	Gm12063	ENSMUST00000148087	lincRNA		11	1	24076559	715
ENSMUSG00000118312	unprocessed_pseudogene	Gm7096	ENSMUST00000237471	unprocessed_pseudogene		19	-1	7848667	1262
ENSMUSG00000082449	processed_pseudogene	Gm15244	ENSMUST00000121122	processed_pseudogene		X	1	160714196	130
ENSMUSG00000083945	processed_pseudogene	Gm15242	ENSMUST00000122459	processed_pseudogene		X	-1	160714178	283
ENSMUSG00000062168	protein_coding	Ppef1	ENSMUST00000136888	protein_coding		X	-1	160719936	252
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000097453	protein_coding		1	1	179960472	6704
ENSMUSG00000026969	protein_coding	Fam166a	ENSMUST00000028346	protein_coding	principal1	2	1	25218745	1125
ENSMUSG00000026969	protein_coding	Fam166a	ENSMUST00000139988	processed_transcript		2	1	25221358	254
ENSMUSG00000062168	protein_coding	Ppef1	ENSMUST00000071204	protein_coding	principal1	X	-1	160719972	2483
ENSMUSG00000035051	protein_coding	Dhx57	ENSMUST00000038166	protein_coding	principal3	17	-1	80290476	4913
ENSMUSG00000062168	protein_coding	Ppef1	ENSMUST00000135856	protein_coding		X	-1	160735765	1064
ENSMUSG00000035051	protein_coding	Dhx57	ENSMUST00000086555	protein_coding	alternative2	17	-1	80290143	4737
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232417	retained_intron		16	1	17619363	5017
ENSMUSG00000062874	processed_pseudogene	Gm4978	ENSMUST00000071565	processed_pseudogene		9	-1	69451035	801
ENSMUSG00000035051	protein_coding	Dhx57	ENSMUST00000234733	retained_intron		17	-1	80289874	3696
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232116	nonsense_mediated_decay		16	1	17619374	921
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000111117	protein_coding	principal3	1	1	179960585	9161
ENSMUSG00000035051	protein_coding	Dhx57	ENSMUST00000235024	retained_intron		17	-1	80267842	518
ENSMUSG00000036752	protein_coding	Tubb4b	ENSMUST00000043584	protein_coding	principal1	2	-1	25224702	1598
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000231736	processed_transcript		16	1	17619377	516
ENSMUSG00000035051	protein_coding	Dhx57	ENSMUST00000234703	retained_intron		17	-1	80270583	352
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232468	retained_intron		16	1	17619381	2446
ENSMUSG00000117440	antisense	Gm50087	ENSMUST00000234217	antisense		17	1	80247102	1964
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232442	protein_coding		16	1	17619389	472
ENSMUSG00000036752	protein_coding	Tubb4b	ENSMUST00000145607	processed_transcript		2	-1	25224654	831
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000231887	protein_coding		16	1	17619517	270
ENSMUSG00000045257	protein_coding	Morn2	ENSMUST00000227729	protein_coding	principal1	17	1	80290203	656
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000134959	nonsense_mediated_decay		1	1	179960760	2892
ENSMUSG00000045257	protein_coding	Morn2	ENSMUST00000061703	protein_coding		17	1	80290212	644
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232271	protein_coding		16	1	17621434	1672
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000076687	protein_coding	alternative1	1	1	179961110	4917
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000231722	nonsense_mediated_decay		16	1	17621436	2136
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000097450	protein_coding	alternative1	1	1	179961110	5160
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000231627	nonsense_mediated_decay		16	1	17621487	2329
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000231436	protein_coding		16	1	17621487	2256
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000212756	protein_coding		1	1	179961110	5247
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000231792	protein_coding		16	1	17621487	1722
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232021	protein_coding		16	1	17621487	2166
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000143350	processed_transcript		1	1	179975899	1298
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232487	retained_intron		16	1	17626511	444
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000231378	retained_intron		16	1	17638322	874
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000132894	retained_intron		1	1	179990740	2129
ENSMUSG00000005899	protein_coding	Smpd4	ENSMUST00000232270	retained_intron		16	1	17638587	793
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000139002	retained_intron		1	1	180084483	732
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000133890	protein_coding		1	1	180101144	3567
ENSMUSG00000105603	processed_pseudogene	Gm32996	ENSMUST00000199828	processed_pseudogene		5	-1	110482201	1447
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000152582	retained_intron		1	1	180107017	3900
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000194974	retained_intron		1	1	180108992	3175
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000143176	protein_coding		1	1	180109192	6389
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000135056	protein_coding		1	1	180109265	2197
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000145181	protein_coding		1	1	180111339	554
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000143161	retained_intron		1	1	180111357	2447
ENSMUSG00000061787	protein_coding	Rps17	ENSMUST00000130487	processed_transcript		7	-1	81344531	405
ENSMUSG00000038664	protein_coding	Herc1	ENSMUST00000042824	protein_coding	principal1	9	1	66350526	15153
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000145274	processed_transcript		1	1	180123766	645
ENSMUSG00000026490	protein_coding	Cdc42bpa	ENSMUST00000129754	retained_intron		1	1	180161007	951
ENSMUSG00000038664	protein_coding	Herc1	ENSMUST00000144280	retained_intron		9	1	66350450	2457
ENSMUSG00000038664	protein_coding	Herc1	ENSMUST00000140487	retained_intron		9	1	66441911	4781
ENSMUSG00000103636	TEC	Gm38331	ENSMUST00000195719	TEC		1	-1	180148151	2671
ENSMUSG00000038664	protein_coding	Herc1	ENSMUST00000124969	retained_intron		9	1	66468621	3032
ENSMUSG00000061787	protein_coding	Rps17	ENSMUST00000080813	protein_coding	principal1	7	-1	81345254	494
ENSMUSG00000102194	TEC	Gm38169	ENSMUST00000191822	TEC		1	1	180021062	2539
ENSMUSG00000038664	protein_coding	Herc1	ENSMUST00000135600	retained_intron		9	1	66496555	3041
ENSMUSG00000038664	protein_coding	Herc1	ENSMUST00000130854	retained_intron		9	1	66500254	4334
ENSMUSG00000038664	protein_coding	Herc1	ENSMUST00000135159	protein_coding		9	1	66451126	1705
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000081528	protein_coding		2	-1	181135177	2382
ENSMUSG00000055691	protein_coding	Gja6	ENSMUST00000069417	protein_coding	principal1	X	-1	160907052	2017
ENSMUSG00000061787	protein_coding	Rps17	ENSMUST00000208054	processed_transcript		7	-1	81345227	383
ENSMUSG00000061787	protein_coding	Rps17	ENSMUST00000134425	retained_intron		7	-1	81345234	660
ENSMUSG00000050503	protein_coding	Fbxl22	ENSMUST00000056890	protein_coding	principal1	9	-1	66514609	4035
ENSMUSG00000061787	protein_coding	Rps17	ENSMUST00000156346	retained_intron		7	-1	81345232	673
ENSMUSG00000061787	protein_coding	Rps17	ENSMUST00000138936	processed_transcript		7	-1	81345224	328
ENSMUSG00000100130	antisense	Gm28379	ENSMUST00000187676	antisense		9	-1	66420641	2896
ENSMUSG00000100130	antisense	Gm28379	ENSMUST00000186450	antisense		9	-1	66448496	554
ENSMUSG00000104077	lincRNA	Gm37027	ENSMUST00000194642	lincRNA		1	-1	195018242	256
ENSMUSG00000048215	lincRNA	A630023P12Rik	ENSMUST00000141532	lincRNA		5	1	110514923	638
ENSMUSG00000048215	lincRNA	A630023P12Rik	ENSMUST00000196681	lincRNA		5	1	110514944	579
ENSMUSG00000104206	lincRNA	Gm32250	ENSMUST00000191885	lincRNA		1	-1	194995345	322
ENSMUSG00000048215	lincRNA	A630023P12Rik	ENSMUST00000142879	lincRNA		5	1	110521095	524
ENSMUSG00000048215	lincRNA	A630023P12Rik	ENSMUST00000141420	lincRNA		5	1	110521131	495
ENSMUSG00000048215	lincRNA	A630023P12Rik	ENSMUST00000129007	lincRNA		5	1	110521162	1221
ENSMUSG00000013160	protein_coding	Atp6v0d1	ENSMUST00000013304	protein_coding	principal1	8	-1	105566047	1629
ENSMUSG00000013160	protein_coding	Atp6v0d1	ENSMUST00000144486	retained_intron		8	-1	105539476	499
ENSMUSG00000081609	processed_pseudogene	Gm12939	ENSMUST00000117303	processed_pseudogene		4	1	126983439	165
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000049792	protein_coding		2	-1	181135177	2920
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000103048	protein_coding		2	-1	181135177	2827
ENSMUSG00000033316	protein_coding	Galnt9	ENSMUST00000040001	protein_coding	principal1	5	1	110544355	2883
ENSMUSG00000033316	protein_coding	Galnt9	ENSMUST00000200404	nonsense_mediated_decay		5	1	110603521	1576
ENSMUSG00000033316	protein_coding	Galnt9	ENSMUST00000165856	protein_coding		5	1	110603522	1541
ENSMUSG00000031292	protein_coding	Cdkl5	ENSMUST00000196297	nonsense_mediated_decay		X	-1	160928488	3024
ENSMUSG00000031292	protein_coding	Cdkl5	ENSMUST00000197942	nonsense_mediated_decay		X	-1	160928521	2840
ENSMUSG00000016494	protein_coding	Cd34	ENSMUST00000016638	protein_coding	principal1	1	1	194938819	2454
ENSMUSG00000031292	protein_coding	Cdkl5	ENSMUST00000087104	protein_coding		X	-1	160994704	3269
ENSMUSG00000031292	protein_coding	Cdkl5	ENSMUST00000112355	processed_transcript		X	-1	160817182	630
ENSMUSG00000016494	protein_coding	Cd34	ENSMUST00000110815	protein_coding		1	1	194938875	2554
ENSMUSG00000031292	protein_coding	Cdkl5	ENSMUST00000198931	protein_coding	principal1	X	-1	160928488	9796
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000103047	protein_coding		2	-1	181135177	2899
ENSMUSG00000016494	protein_coding	Cd34	ENSMUST00000194458	retained_intron		1	1	194938905	3063
ENSMUSG00000016494	protein_coding	Cd34	ENSMUST00000195092	retained_intron		1	1	194938951	2279
ENSMUSG00000031292	protein_coding	Cdkl5	ENSMUST00000199927	retained_intron		X	-1	160850477	3556
ENSMUSG00000016494	protein_coding	Cd34	ENSMUST00000194036	nonsense_mediated_decay		1	1	194938995	616
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000103051	protein_coding	alternative2	2	-1	181135261	4200
ENSMUSG00000103443	TEC	Gm37132	ENSMUST00000195553	TEC		1	-1	195081336	2238
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000129695	protein_coding		2	-1	181114683	2735
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000103049	protein_coding		2	-1	181134922	2936
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000103050	protein_coding	alternative2	2	-1	181135131	2713
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000197599	protein_coding		2	-1	181109756	855
ENSMUSG00000031293	protein_coding	Rs1	ENSMUST00000033650	protein_coding	principal1	X	1	160768013	5840
ENSMUSG00000031293	protein_coding	Rs1	ENSMUST00000112368	protein_coding		X	1	160768180	731
ENSMUSG00000031293	protein_coding	Rs1	ENSMUST00000150170	processed_transcript		X	1	160791501	718
ENSMUSG00000016493	protein_coding	Cd46	ENSMUST00000162650	protein_coding	principal1	1	-1	195092249	6288
ENSMUSG00000104168	antisense	Gm38250	ENSMUST00000195108	antisense		8	1	105566324	462
ENSMUSG00000104168	antisense	Gm38250	ENSMUST00000192691	antisense		8	1	105566351	766
ENSMUSG00000016493	protein_coding	Cd46	ENSMUST00000161772	retained_intron		1	-1	195069114	1264
ENSMUSG00000041115	protein_coding	Iqsec2	ENSMUST00000112605	protein_coding	alternative2	X	1	152144272	6017
ENSMUSG00000016493	protein_coding	Cd46	ENSMUST00000159563	nonsense_mediated_decay		1	-1	195092225	1263
ENSMUSG00000041115	protein_coding	Iqsec2	ENSMUST00000112604	protein_coding		X	1	152144272	5967
ENSMUSG00000016493	protein_coding	Cd46	ENSMUST00000162951	retained_intron		1	-1	195083075	907
ENSMUSG00000005698	protein_coding	Ctcf	ENSMUST00000132679	processed_transcript		8	1	105636568	1554
ENSMUSG00000104525	TEC	Gm37334	ENSMUST00000192325	TEC		1	1	194993258	2938
ENSMUSG00000041115	protein_coding	Iqsec2	ENSMUST00000146835	processed_transcript		X	1	152178964	959
ENSMUSG00000041115	protein_coding	Iqsec2	ENSMUST00000128724	processed_transcript		X	1	152178964	863
ENSMUSG00000097325	antisense	Gm16897	ENSMUST00000180780	antisense		1	-1	194976960	2492
ENSMUSG00000041115	protein_coding	Iqsec2	ENSMUST00000153356	processed_transcript		X	1	152178964	462
ENSMUSG00000041115	protein_coding	Iqsec2	ENSMUST00000096275	protein_coding	principal2	X	1	152178964	5252
ENSMUSG00000104010	TEC	Gm37366	ENSMUST00000194487	TEC		1	1	195042383	2297
ENSMUSG00000103867	TEC	9630010A21Rik	ENSMUST00000192348	TEC		1	1	195013746	2703
ENSMUSG00000005698	protein_coding	Ctcf	ENSMUST00000005841	protein_coding	principal1	8	1	105636579	3782
ENSMUSG00000096929	processed_transcript	A330023F24Rik	ENSMUST00000181226	lincRNA		1	1	194976375	955
ENSMUSG00000041115	protein_coding	Iqsec2	ENSMUST00000168786	protein_coding		X	1	152144268	5993
ENSMUSG00000005698	protein_coding	Ctcf	ENSMUST00000128510	processed_transcript		8	1	105636935	528
ENSMUSG00000096929	processed_transcript	A330023F24Rik	ENSMUST00000181947	retained_intron		1	1	194976385	4632
ENSMUSG00000005698	protein_coding	Ctcf	ENSMUST00000129388	processed_transcript		8	1	105637066	729
ENSMUSG00000005698	protein_coding	Ctcf	ENSMUST00000137735	processed_transcript		8	1	105676011	469
ENSMUSG00000096929	processed_transcript	A330023F24Rik	ENSMUST00000181273	lincRNA		1	1	195017398	4217
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000152099	processed_transcript		2	-1	181095421	513
ENSMUSG00000005698	protein_coding	Ctcf	ENSMUST00000156436	retained_intron		8	1	105676011	851
ENSMUSG00000096929	processed_transcript	A330023F24Rik	ENSMUST00000194584	retained_intron		1	1	195024109	4432
ENSMUSG00000098120	lincRNA	Gm5914	ENSMUST00000182863	lincRNA		8	-1	105637350	375
ENSMUSG00000098120	lincRNA	Gm5914	ENSMUST00000182046	lincRNA		8	-1	105637485	332
ENSMUSG00000102593	TEC	Gm38384	ENSMUST00000195413	TEC		8	1	105633750	1122
ENSMUSG00000005705	protein_coding	Agrp	ENSMUST00000005849	protein_coding	principal1	8	-1	105568298	661
ENSMUSG00000005705	protein_coding	Agrp	ENSMUST00000194091	protein_coding	principal1	8	-1	105637393	734
ENSMUSG00000005705	protein_coding	Agrp	ENSMUST00000194654	protein_coding		8	-1	105579845	674
ENSMUSG00000038604	protein_coding	Ripor1	ENSMUST00000043531	protein_coding	principal1	8	1	105605255	4108
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000145861	retained_intron		2	-1	181100798	3131
ENSMUSG00000080021	processed_pseudogene	Gm5915	ENSMUST00000116136	processed_pseudogene		8	-1	105660787	454
ENSMUSG00000110686	processed_pseudogene	Gm45855	ENSMUST00000212546	processed_pseudogene		8	-1	105586200	880
ENSMUSG00000032231	protein_coding	Anxa2	ENSMUST00000034756	protein_coding	principal1	9	1	69453620	1447
ENSMUSG00000032925	protein_coding	Itgbl1	ENSMUST00000049681	protein_coding	principal1	14	1	123659971	4065
ENSMUSG00000022044	protein_coding	Stmn4	ENSMUST00000152093	protein_coding		14	1	66344296	418
ENSMUSG00000032231	protein_coding	Anxa2	ENSMUST00000123470	protein_coding		9	1	69453716	678
ENSMUSG00000032925	protein_coding	Itgbl1	ENSMUST00000142161	nonsense_mediated_decay		14	1	123660125	3372
ENSMUSG00000032231	protein_coding	Anxa2	ENSMUST00000134907	protein_coding		9	1	69454066	641
ENSMUSG00000032925	protein_coding	Itgbl1	ENSMUST00000132026	protein_coding		14	1	123661424	3355
ENSMUSG00000016942	protein_coding	Tmprss6	ENSMUST00000017086	protein_coding	principal2	15	-1	78468634	3192
ENSMUSG00000032231	protein_coding	Anxa2	ENSMUST00000143878	retained_intron		9	1	69478465	2280
ENSMUSG00000082793	processed_pseudogene	Gm9308	ENSMUST00000119073	processed_pseudogene		14	-1	123698588	448
ENSMUSG00000016942	protein_coding	Tmprss6	ENSMUST00000230226	protein_coding	alternative2	15	-1	78468609	3126
ENSMUSG00000032231	protein_coding	Anxa2	ENSMUST00000136282	protein_coding		9	1	69480111	827
ENSMUSG00000032231	protein_coding	Anxa2	ENSMUST00000154591	retained_intron		9	1	69486783	920
ENSMUSG00000016942	protein_coding	Tmprss6	ENSMUST00000230020	protein_coding		15	-1	78442435	295
ENSMUSG00000016942	protein_coding	Tmprss6	ENSMUST00000229516	protein_coding		15	-1	78465343	1785
ENSMUSG00000086399	antisense	Gm16144	ENSMUST00000131093	antisense		9	-1	69479598	827
ENSMUSG00000016942	protein_coding	Tmprss6	ENSMUST00000230473	retained_intron		15	-1	78444379	347
ENSMUSG00000016942	protein_coding	Tmprss6	ENSMUST00000230159	protein_coding		15	-1	78465343	1746
ENSMUSG00000111096	processed_pseudogene	Gm47203	ENSMUST00000215589	processed_pseudogene		9	-1	69599754	448
ENSMUSG00000016942	protein_coding	Tmprss6	ENSMUST00000229124	protein_coding		15	-1	78468601	745
ENSMUSG00000022438	protein_coding	Parvb	ENSMUST00000023072	protein_coding	principal1	15	1	84232043	3784
ENSMUSG00000097623	antisense	B230323A14Rik	ENSMUST00000180488	antisense		9	1	69758740	2864
ENSMUSG00000022438	protein_coding	Parvb	ENSMUST00000131158	retained_intron		15	1	84271291	438
ENSMUSG00000097623	antisense	B230323A14Rik	ENSMUST00000180914	antisense		9	1	69761146	1635
ENSMUSG00000022438	protein_coding	Parvb	ENSMUST00000122818	nonsense_mediated_decay		15	1	84232066	438
ENSMUSG00000111286	processed_pseudogene	Gm18745	ENSMUST00000216018	processed_pseudogene		9	-1	69793151	548
ENSMUSG00000022438	protein_coding	Parvb	ENSMUST00000146020	processed_transcript		15	1	84257140	378
ENSMUSG00000059246	protein_coding	Foxb1	ENSMUST00000071281	protein_coding	principal1	9	-1	69760940	2984
ENSMUSG00000022044	protein_coding	Stmn4	ENSMUST00000074523	protein_coding	principal3	14	1	66344304	1303
ENSMUSG00000022044	protein_coding	Stmn4	ENSMUST00000136192	processed_transcript		14	1	66344367	362
ENSMUSG00000022044	protein_coding	Stmn4	ENSMUST00000123435	retained_intron		14	1	66344367	405
ENSMUSG00000022044	protein_coding	Stmn4	ENSMUST00000118426	protein_coding		14	1	66344373	1281
ENSMUSG00000022044	protein_coding	Stmn4	ENSMUST00000121955	protein_coding		14	1	66344374	1361
ENSMUSG00000022044	protein_coding	Stmn4	ENSMUST00000120229	protein_coding	alternative1	14	1	66344375	1281
ENSMUSG00000022044	protein_coding	Stmn4	ENSMUST00000134440	protein_coding		14	1	66344378	422
ENSMUSG00000022044	protein_coding	Stmn4	ENSMUST00000147477	retained_intron		14	1	66344381	685
ENSMUSG00000032091	protein_coding	Tmprss4	ENSMUST00000034599	protein_coding	principal1	9	-1	45204092	2284
ENSMUSG00000032091	protein_coding	Tmprss4	ENSMUST00000170069	nonsense_mediated_decay		9	-1	45204090	2177
ENSMUSG00000032091	protein_coding	Tmprss4	ENSMUST00000165263	nonsense_mediated_decay		9	-1	45203986	1456
ENSMUSG00000032091	protein_coding	Tmprss4	ENSMUST00000163237	processed_transcript		9	-1	45204060	1609
ENSMUSG00000032091	protein_coding	Tmprss4	ENSMUST00000163945	retained_intron		9	-1	45180653	919
ENSMUSG00000114970	TEC	Gm49069	ENSMUST00000228608	TEC		14	-1	124612492	4011
ENSMUSG00000091659	antisense	Gm17099	ENSMUST00000166780	antisense		9	1	45172997	412
ENSMUSG00000091996	protein_coding	BC049352	ENSMUST00000171277	processed_transcript		9	1	45182007	690
ENSMUSG00000091996	protein_coding	BC049352	ENSMUST00000164650	processed_transcript		9	1	45182034	1768
ENSMUSG00000091996	protein_coding	BC049352	ENSMUST00000171799	protein_coding	principal1	9	1	45195766	1714
ENSMUSG00000025551	protein_coding	Fgf14	ENSMUST00000026631	protein_coding	principal1	14	-1	124192902	3180
ENSMUSG00000025551	protein_coding	Fgf14	ENSMUST00000095529	protein_coding		14	-1	124677127	3608
ENSMUSG00000101445	antisense	Gm28932	ENSMUST00000186300	antisense		14	1	123979210	357
ENSMUSG00000099994	antisense	1700024B18Rik	ENSMUST00000190088	antisense		14	1	123987635	423
ENSMUSG00000025586	protein_coding	Cpeb1	ENSMUST00000098331	protein_coding	principal3	7	-1	81454758	3111
ENSMUSG00000108568	unprocessed_pseudogene	Olfr277-ps1	ENSMUST00000205749	unprocessed_pseudogene		14	1	124589055	285
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000223878	protein_coding	principal1	17	1	80307407	3253
ENSMUSG00000115472	processed_pseudogene	Gm49070	ENSMUST00000228023	processed_pseudogene		14	1	124398691	282
ENSMUSG00000025586	protein_coding	Cpeb1	ENSMUST00000130310	protein_coding		7	-1	81436377	2969
ENSMUSG00000082738	processed_pseudogene	Gm15422	ENSMUST00000117453	processed_pseudogene		14	-1	123985816	541
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000224391	protein_coding		17	1	80307425	679
ENSMUSG00000115191	processed_pseudogene	Gm49071	ENSMUST00000227084	processed_pseudogene		14	1	124531952	452
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000225018	retained_intron		17	1	80347540	1207
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000224631	processed_transcript		17	1	80353979	817
ENSMUSG00000025586	protein_coding	Cpeb1	ENSMUST00000178892	protein_coding	alternative1	7	-1	81454675	1777
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000224676	retained_intron		17	1	80371197	611
ENSMUSG00000025586	protein_coding	Cpeb1	ENSMUST00000152319	retained_intron		7	-1	81350510	718
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000224002	retained_intron		17	1	80373657	491
ENSMUSG00000025586	protein_coding	Cpeb1	ENSMUST00000136689	processed_transcript		7	-1	81355995	639
ENSMUSG00000025586	protein_coding	Cpeb1	ENSMUST00000153419	processed_transcript		7	-1	81372441	654
ENSMUSG00000025586	protein_coding	Cpeb1	ENSMUST00000135177	processed_transcript		7	-1	81455465	821
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000225658	protein_coding		17	1	80373658	473
ENSMUSG00000025586	protein_coding	Cpeb1	ENSMUST00000151661	processed_transcript		7	-1	81372485	326
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000224966	protein_coding		17	1	80373658	490
ENSMUSG00000025586	protein_coding	Cpeb1	ENSMUST00000124937	processed_transcript		7	-1	81455392	335
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000225223	protein_coding		17	1	80373703	714
ENSMUSG00000081747	processed_pseudogene	Rpl7a-ps9	ENSMUST00000117118	processed_pseudogene		7	1	81445920	777
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000225548	protein_coding		17	1	80373715	456
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000226013	processed_transcript		17	1	80381364	259
ENSMUSG00000054901	protein_coding	Arhgef33	ENSMUST00000068175	protein_coding	principal1	17	1	80307407	3260
ENSMUSG00000011958	protein_coding	Bnip2	ENSMUST00000034754	protein_coding	principal4	9	1	69989466	2464
ENSMUSG00000011958	protein_coding	Bnip2	ENSMUST00000085393	protein_coding	alternative2	9	1	69989504	2328
ENSMUSG00000011958	protein_coding	Bnip2	ENSMUST00000117450	protein_coding	alternative2	9	1	69989515	1465
ENSMUSG00000011958	protein_coding	Bnip2	ENSMUST00000154772	nonsense_mediated_decay		9	1	69989517	676
ENSMUSG00000024241	protein_coding	Sos1	ENSMUST00000068714	protein_coding	principal1	17	-1	80479969	8436
ENSMUSG00000011958	protein_coding	Bnip2	ENSMUST00000143049	retained_intron		9	1	69997176	621
ENSMUSG00000011958	protein_coding	Bnip2	ENSMUST00000133307	processed_transcript		9	1	69998232	643
ENSMUSG00000011958	protein_coding	Bnip2	ENSMUST00000137472	protein_coding		9	1	70003379	644
ENSMUSG00000024241	protein_coding	Sos1	ENSMUST00000234841	retained_intron		17	-1	80480453	5553
ENSMUSG00000083264	processed_pseudogene	Gm11461	ENSMUST00000119909	processed_pseudogene		2	-1	165925841	387
ENSMUSG00000011958	protein_coding	Bnip2	ENSMUST00000165389	protein_coding	alternative2	9	1	69995478	945
ENSMUSG00000033294	protein_coding	Noc4l	ENSMUST00000042147	protein_coding	principal1	5	-1	110653417	2075
ENSMUSG00000082924	processed_pseudogene	Gm11462	ENSMUST00000117749	processed_pseudogene		2	1	165959789	562
ENSMUSG00000019297	protein_coding	Nop9	ENSMUST00000019441	protein_coding	principal1	14	1	55745693	3694
ENSMUSG00000101555	antisense	Gm28731	ENSMUST00000185564	antisense		9	-1	69989968	1569
ENSMUSG00000033294	protein_coding	Noc4l	ENSMUST00000123380	retained_intron		5	-1	110650017	709
ENSMUSG00000019297	protein_coding	Nop9	ENSMUST00000227300	retained_intron		14	1	55749226	715
ENSMUSG00000087351	lincRNA	Gm11464	ENSMUST00000146963	lincRNA		2	-1	165992517	537
ENSMUSG00000033294	protein_coding	Noc4l	ENSMUST00000150100	retained_intron		5	-1	110653259	665
ENSMUSG00000033294	protein_coding	Noc4l	ENSMUST00000145712	retained_intron		5	-1	110653348	680
ENSMUSG00000084816	lincRNA	Platr29	ENSMUST00000130022	lincRNA		2	-1	165985924	830
ENSMUSG00000033294	protein_coding	Noc4l	ENSMUST00000124612	retained_intron		5	-1	110653366	795
ENSMUSG00000033294	protein_coding	Noc4l	ENSMUST00000199795	retained_intron		5	-1	110653380	367
ENSMUSG00000022219	protein_coding	Cideb	ENSMUST00000001497	protein_coding	principal1	14	-1	55758458	1212
ENSMUSG00000022219	protein_coding	Cideb	ENSMUST00000136270	retained_intron		14	-1	55758379	887
ENSMUSG00000045875	protein_coding	Adra1a	ENSMUST00000159365	protein_coding	alternative1	14	1	66635251	4118
ENSMUSG00000045875	protein_coding	Adra1a	ENSMUST00000054661	protein_coding	principal3	14	1	66635258	4137
ENSMUSG00000045875	protein_coding	Adra1a	ENSMUST00000160647	retained_intron		14	1	66635309	3648
ENSMUSG00000045875	protein_coding	Adra1a	ENSMUST00000225182	protein_coding		14	1	66635331	2337
ENSMUSG00000045875	protein_coding	Adra1a	ENSMUST00000159068	protein_coding	principal3	14	1	66635341	4282
ENSMUSG00000045875	protein_coding	Adra1a	ENSMUST00000161339	protein_coding	principal3	14	1	66635556	2788
ENSMUSG00000085334	processed_transcript	Gm12940	ENSMUST00000145240	processed_transcript		4	1	127033731	331
ENSMUSG00000085334	processed_transcript	Gm12940	ENSMUST00000130659	processed_transcript		4	1	127035450	574
ENSMUSG00000085334	processed_transcript	Gm12940	ENSMUST00000137236	processed_transcript		4	1	127035681	1970
ENSMUSG00000085334	processed_transcript	Gm12940	ENSMUST00000137457	processed_transcript		4	1	127035782	462
ENSMUSG00000035805	protein_coding	Mlc1	ENSMUST00000042594	protein_coding	principal2	15	-1	88979007	2783
ENSMUSG00000035805	protein_coding	Mlc1	ENSMUST00000109368	protein_coding	alternative2	15	-1	88979007	2801
ENSMUSG00000115916	processed_pseudogene	Gm8702	ENSMUST00000228970	processed_pseudogene		15	-1	88980414	394
ENSMUSG00000046460	protein_coding	Sh2d7	ENSMUST00000118413	protein_coding	principal1	9	1	54534146	3045
ENSMUSG00000046460	protein_coding	Sh2d7	ENSMUST00000238614	processed_transcript		9	1	54538988	1316
ENSMUSG00000046460	protein_coding	Sh2d7	ENSMUST00000060242	protein_coding		9	1	54538984	2759
ENSMUSG00000028820	protein_coding	Sfpq	ENSMUST00000030623	protein_coding	principal1	4	1	127021324	3465
ENSMUSG00000028820	protein_coding	Sfpq	ENSMUST00000140682	processed_transcript		4	1	127023383	755
ENSMUSG00000037493	protein_coding	Cib2	ENSMUST00000041901	protein_coding	principal1	9	-1	54560218	1433
ENSMUSG00000028820	protein_coding	Sfpq	ENSMUST00000146285	processed_transcript		4	1	127023527	925
ENSMUSG00000028820	protein_coding	Sfpq	ENSMUST00000144630	processed_transcript		4	1	127025924	600
ENSMUSG00000028820	protein_coding	Sfpq	ENSMUST00000143168	processed_transcript		4	1	127025956	967
ENSMUSG00000028820	protein_coding	Sfpq	ENSMUST00000125453	processed_transcript		4	1	127026445	644
ENSMUSG00000084088	processed_pseudogene	Gm12941	ENSMUST00000117934	processed_pseudogene		4	1	127046383	220
ENSMUSG00000015365	protein_coding	Mov10l1	ENSMUST00000156949	retained_intron		15	1	88982909	845
ENSMUSG00000084149	processed_pseudogene	Gm12944	ENSMUST00000119262	processed_pseudogene		4	1	127056262	463
ENSMUSG00000043872	protein_coding	Zmym1	ENSMUST00000106102	protein_coding	principal2	4	-1	127061152	3852
ENSMUSG00000043872	protein_coding	Zmym1	ENSMUST00000152607	processed_transcript		4	-1	127061060	2354
ENSMUSG00000043872	protein_coding	Zmym1	ENSMUST00000106099	protein_coding	alternative2	4	-1	127061124	2982
ENSMUSG00000043872	protein_coding	Zmym1	ENSMUST00000124429	processed_transcript		4	-1	127058881	1878
ENSMUSG00000043872	protein_coding	Zmym1	ENSMUST00000140605	processed_transcript		4	-1	127057573	268
ENSMUSG00000043872	protein_coding	Zmym1	ENSMUST00000136186	protein_coding		4	-1	127061086	621
ENSMUSG00000043872	protein_coding	Zmym1	ENSMUST00000055013	protein_coding	principal2	4	-1	127058986	3001
ENSMUSG00000033966	protein_coding	Cdkl4	ENSMUST00000086545	protein_coding	principal1	17	-1	80563834	2931
ENSMUSG00000015365	protein_coding	Mov10l1	ENSMUST00000146993	protein_coding	alternative2	15	1	88982909	4133
ENSMUSG00000109401	TEC	Cpeb1os1	ENSMUST00000207156	TEC		7	1	81455895	2112
ENSMUSG00000033966	protein_coding	Cdkl4	ENSMUST00000234602	protein_coding	principal1	17	-1	80577813	3078
ENSMUSG00000015365	protein_coding	Mov10l1	ENSMUST00000148198	processed_transcript		15	1	89020421	265
ENSMUSG00000033966	protein_coding	Cdkl4	ENSMUST00000234349	protein_coding	principal1	17	-1	80577484	1991
ENSMUSG00000114019	TEC	Gm47155	ENSMUST00000220564	TEC		13	1	93410783	2175
ENSMUSG00000015365	protein_coding	Mov10l1	ENSMUST00000143030	protein_coding		15	1	89023613	1260
ENSMUSG00000117375	antisense	Gm33373	ENSMUST00000234757	antisense		17	1	80553464	426
ENSMUSG00000113514	processed_pseudogene	Gm18960	ENSMUST00000222962	processed_pseudogene		13	-1	93421316	713
ENSMUSG00000015365	protein_coding	Mov10l1	ENSMUST00000015509	protein_coding	principal2	15	1	88982994	4052
ENSMUSG00000086231	antisense	Rapgef4os3	ENSMUST00000132792	antisense		2	-1	72248975	3485
ENSMUSG00000085439	antisense	Rapgef4os1	ENSMUST00000126462	antisense		2	-1	72148796	638
ENSMUSG00000000037	protein_coding	Scml2	ENSMUST00000238603	protein_coding		X	1	161082525	1257
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000111838	protein_coding	alternative1	9	1	113812586	5609
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000166734	protein_coding	principal3	9	1	113812598	4108
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000215022	nonsense_mediated_decay		9	1	113812598	4125
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000214522	protein_coding	alternative1	9	1	113812598	4159
ENSMUSG00000033392	protein_coding	Clasp2	ENSMUST00000163895	protein_coding	alternative1	9	1	113812600	4112
ENSMUSG00000000037	protein_coding	Scml2	ENSMUST00000101113	protein_coding	alternative2	X	1	161117193	2931
ENSMUSG00000000037	protein_coding	Scml2	ENSMUST00000087090	protein_coding	alternative2	X	1	161124268	2953
ENSMUSG00000000037	protein_coding	Scml2	ENSMUST00000074802	protein_coding	alternative2	X	1	161162750	3440
ENSMUSG00000000037	protein_coding	Scml2	ENSMUST00000019101	protein_coding	principal3	X	1	161162772	4842
ENSMUSG00000000037	protein_coding	Scml2	ENSMUST00000077375	protein_coding	alternative2	X	1	161163060	3550
ENSMUSG00000000037	protein_coding	Scml2	ENSMUST00000124775	processed_transcript		X	1	161234573	517
ENSMUSG00000000037	protein_coding	Scml2	ENSMUST00000238361	protein_coding		X	1	161246257	1894
ENSMUSG00000000037	protein_coding	Scml2	ENSMUST00000112345	protein_coding	alternative2	X	1	161162772	4847
ENSMUSG00000111793	antisense	Gm47950	ENSMUST00000214534	antisense		9	-1	113970998	622
ENSMUSG00000027639	protein_coding	Samhd1	ENSMUST00000057725	protein_coding	principal3	2	-1	157135265	3926
ENSMUSG00000027639	protein_coding	Samhd1	ENSMUST00000123932	nonsense_mediated_decay		2	-1	157135093	3753
ENSMUSG00000027639	protein_coding	Samhd1	ENSMUST00000139263	protein_coding		2	-1	157135120	2036
ENSMUSG00000027639	protein_coding	Samhd1	ENSMUST00000160213	retained_intron		2	-1	157110612	681
ENSMUSG00000027639	protein_coding	Samhd1	ENSMUST00000109549	protein_coding	alternative2	2	-1	157135206	3245
ENSMUSG00000027639	protein_coding	Samhd1	ENSMUST00000139149	retained_intron		2	-1	157110040	678
ENSMUSG00000027639	protein_coding	Samhd1	ENSMUST00000142508	retained_intron		2	-1	157110611	473
ENSMUSG00000027639	protein_coding	Samhd1	ENSMUST00000149313	retained_intron		2	-1	157134937	1375
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000118198	protein_coding	principal1	9	1	70012550	893
ENSMUSG00000027639	protein_coding	Samhd1	ENSMUST00000152866	retained_intron		2	-1	157130057	542
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000119413	protein_coding	principal1	9	1	70012571	1034
ENSMUSG00000027639	protein_coding	Samhd1	ENSMUST00000088523	protein_coding	alternative2	2	-1	157135222	1996
ENSMUSG00000031314	protein_coding	Taf1	ENSMUST00000118878	protein_coding	alternative2	X	1	101532734	7210
ENSMUSG00000031314	protein_coding	Taf1	ENSMUST00000149274	protein_coding	principal2	X	1	101532759	5954
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000131078	retained_intron		9	1	70012554	1199
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000116552	nonsense_mediated_decay		9	1	70012566	888
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000140265	nonsense_mediated_decay		9	1	70012643	791
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000126120	retained_intron		9	1	70012571	1613
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000140305	protein_coding		9	1	70012574	491
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000122087	protein_coding		9	1	70012595	588
ENSMUSG00000031314	protein_coding	Taf1	ENSMUST00000143908	nonsense_mediated_decay		X	1	101532759	7331
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000133881	processed_transcript		9	1	70012568	833
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000141894	retained_intron		9	1	70016819	627
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000148239	processed_transcript		9	1	70015812	659
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000148889	retained_intron		9	1	70019048	769
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000145816	retained_intron		9	1	70012579	795
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000119905	protein_coding		9	1	70012565	622
ENSMUSG00000031314	protein_coding	Taf1	ENSMUST00000129487	retained_intron		X	1	101556310	4556
ENSMUSG00000033543	protein_coding	Gtf2a2	ENSMUST00000135593	retained_intron		9	1	70012584	425
ENSMUSG00000031314	protein_coding	Taf1	ENSMUST00000211461	processed_transcript		X	1	101578229	464
ENSMUSG00000031314	protein_coding	Taf1	ENSMUST00000140470	processed_transcript		X	1	101590547	648
ENSMUSG00000031314	protein_coding	Taf1	ENSMUST00000101341	protein_coding	alternative2	X	1	101532741	8054
ENSMUSG00000057913	lincRNA	Gm10032	ENSMUST00000071522	lincRNA		14	1	66784480	1887
ENSMUSG00000057913	lincRNA	Gm10032	ENSMUST00000225384	lincRNA		14	1	66784508	512
ENSMUSG00000009741	protein_coding	Ubp1	ENSMUST00000214095	protein_coding	alternative1	9	1	113931435	2320
ENSMUSG00000087331	antisense	1810021B22Rik	ENSMUST00000162579	antisense		15	-1	89074297	544
ENSMUSG00000009741	protein_coding	Ubp1	ENSMUST00000216891	retained_intron		9	1	113931629	3997
ENSMUSG00000087331	antisense	1810021B22Rik	ENSMUST00000161483	antisense		15	-1	89075149	340
ENSMUSG00000009741	protein_coding	Ubp1	ENSMUST00000216558	protein_coding	principal4	9	1	113931654	1623
ENSMUSG00000009741	protein_coding	Ubp1	ENSMUST00000216293	retained_intron		9	1	113969225	2187
ENSMUSG00000087331	antisense	1810021B22Rik	ENSMUST00000161735	antisense		15	-1	89075149	494
ENSMUSG00000087331	antisense	1810021B22Rik	ENSMUST00000159412	antisense		15	-1	89075211	430
ENSMUSG00000087331	antisense	1810021B22Rik	ENSMUST00000150364	antisense		15	-1	89075852	652
ENSMUSG00000009741	protein_coding	Ubp1	ENSMUST00000116492	protein_coding	alternative1	9	1	113931564	2111
ENSMUSG00000009741	protein_coding	Ubp1	ENSMUST00000084885	protein_coding	principal4	9	1	113930934	3850
ENSMUSG00000009741	protein_coding	Ubp1	ENSMUST00000009885	protein_coding	alternative1	9	1	113930934	3742
ENSMUSG00000015363	protein_coding	Trabd	ENSMUST00000168863	protein_coding		15	1	89075124	830
ENSMUSG00000032507	protein_coding	Fbxl2	ENSMUST00000117537	nonsense_mediated_decay		9	-1	114026729	1620
ENSMUSG00000015363	protein_coding	Trabd	ENSMUST00000081702	protein_coding	principal1	15	1	89076013	2439
ENSMUSG00000015363	protein_coding	Trabd	ENSMUST00000169870	nonsense_mediated_decay		15	1	89076072	2396
ENSMUSG00000032507	protein_coding	Fbxl2	ENSMUST00000035090	protein_coding	principal1	9	-1	114026761	3464
ENSMUSG00000015363	protein_coding	Trabd	ENSMUST00000169891	protein_coding		15	1	89076094	1422
ENSMUSG00000015363	protein_coding	Trabd	ENSMUST00000165690	protein_coding	principal1	15	1	89076124	1941
ENSMUSG00000015363	protein_coding	Trabd	ENSMUST00000170754	retained_intron		15	1	89082529	4464
ENSMUSG00000015363	protein_coding	Trabd	ENSMUST00000163696	retained_intron		15	1	89084709	743
ENSMUSG00000032507	protein_coding	Fbxl2	ENSMUST00000143180	nonsense_mediated_decay		9	-1	114026726	2257
ENSMUSG00000058441	protein_coding	Panx2	ENSMUST00000161372	protein_coding		15	1	89059734	2314
ENSMUSG00000032507	protein_coding	Fbxl2	ENSMUST00000139757	retained_intron		9	-1	113991504	1101
ENSMUSG00000032507	protein_coding	Fbxl2	ENSMUST00000127352	retained_intron		9	-1	114026774	615
ENSMUSG00000032507	protein_coding	Fbxl2	ENSMUST00000141832	processed_transcript		9	-1	114046191	394
ENSMUSG00000058441	protein_coding	Panx2	ENSMUST00000162424	protein_coding	principal1	15	1	89059747	3391
ENSMUSG00000058441	protein_coding	Panx2	ENSMUST00000159960	protein_coding		15	1	89069673	355
ENSMUSG00000080983	processed_pseudogene	Gm5419	ENSMUST00000119301	processed_pseudogene		X	-1	161272840	527
ENSMUSG00000086596	protein_coding	Susd5	ENSMUST00000135338	protein_coding	principal1	9	1	114057140	4083
ENSMUSG00000118582	unprocessed_pseudogene	AC157997.1	ENSMUST00000239187	unprocessed_pseudogene		9	-1	114116677	55
ENSMUSG00000108981	protein_coding	Gm15262	ENSMUST00000141946	protein_coding		X	1	161287456	380
ENSMUSG00000108981	protein_coding	Gm15262	ENSMUST00000208374	retained_intron		X	1	161297739	1156
ENSMUSG00000108981	protein_coding	Gm15262	ENSMUST00000207353	protein_coding		X	1	161297767	1272
ENSMUSG00000111734	lincRNA	Gm29825	ENSMUST00000214237	lincRNA		9	1	114118088	3775
ENSMUSG00000108981	protein_coding	Gm15262	ENSMUST00000207853	protein_coding		X	1	161297803	1179
ENSMUSG00000108981	protein_coding	Gm15262	ENSMUST00000207800	protein_coding		X	1	161297899	1822
ENSMUSG00000108981	protein_coding	Gm15262	ENSMUST00000208920	protein_coding		X	1	161298367	1198
ENSMUSG00000108981	protein_coding	Gm15262	ENSMUST00000207320	protein_coding	principal1	X	1	161298379	5010
ENSMUSG00000032226	protein_coding	Gcnt3	ENSMUST00000034751	protein_coding	principal1	9	-1	70038088	4301
ENSMUSG00000111176	TEC	Gm47233	ENSMUST00000217561	TEC		9	1	70069867	2168
ENSMUSG00000064299	processed_transcript	4921528I07Rik	ENSMUST00000213446	lincRNA		9	-1	114317028	3798
ENSMUSG00000064299	processed_transcript	4921528I07Rik	ENSMUST00000214265	processed_transcript		9	-1	114284646	800
ENSMUSG00000111043	lincRNA	2210414F02Rik	ENSMUST00000215316	lincRNA		9	1	70072923	396
ENSMUSG00000064299	processed_transcript	4921528I07Rik	ENSMUST00000072612	processed_transcript		9	-1	114317028	2698
ENSMUSG00000081845	processed_pseudogene	Prkaca-ps1	ENSMUST00000120823	processed_pseudogene		X	-1	161486485	919
ENSMUSG00000053820	protein_coding	Bcl2a1c	ENSMUST00000066460	protein_coding	principal1	9	1	114330135	444
ENSMUSG00000043518	protein_coding	Rai2	ENSMUST00000112338	protein_coding	principal1	X	1	161717069	2165
ENSMUSG00000043518	protein_coding	Rai2	ENSMUST00000061514	protein_coding	principal1	X	1	161717627	2204
ENSMUSG00000006800	protein_coding	Sulf2	ENSMUST00000109249	protein_coding	principal1	2	-1	166155663	4580
ENSMUSG00000006800	protein_coding	Sulf2	ENSMUST00000146497	protein_coding	principal1	2	-1	166155663	3808
ENSMUSG00000006800	protein_coding	Sulf2	ENSMUST00000088086	protein_coding	principal1	2	-1	166155285	3927
ENSMUSG00000086540	transcribed_unitary_pseudogene	Scml1	ENSMUST00000136860	processed_transcript		X	-1	161832176	2537
ENSMUSG00000086540	transcribed_unitary_pseudogene	Scml1	ENSMUST00000238615	transcribed_unitary_pseudogene		X	-1	161825323	551
ENSMUSG00000006800	protein_coding	Sulf2	ENSMUST00000125503	retained_intron		2	-1	166076018	450
ENSMUSG00000032431	protein_coding	Crtap	ENSMUST00000084881	protein_coding	principal1	9	-1	114390675	1674
ENSMUSG00000006800	protein_coding	Sulf2	ENSMUST00000143996	retained_intron		2	-1	166078119	694
ENSMUSG00000006800	protein_coding	Sulf2	ENSMUST00000139266	protein_coding		2	-1	166154806	897
ENSMUSG00000032431	protein_coding	Crtap	ENSMUST00000151377	retained_intron		9	-1	114378221	615
ENSMUSG00000006800	protein_coding	Sulf2	ENSMUST00000133395	protein_coding		2	-1	166154423	341
ENSMUSG00000074039	processed_transcript	4930520O04Rik	ENSMUST00000124664	processed_transcript		9	1	114368303	1285
ENSMUSG00000074039	processed_transcript	4930520O04Rik	ENSMUST00000147689	processed_transcript		9	1	114368324	425
ENSMUSG00000074039	processed_transcript	4930520O04Rik	ENSMUST00000131898	processed_transcript		9	1	114368416	2660
ENSMUSG00000032224	protein_coding	Fam81a	ENSMUST00000034749	protein_coding	principal1	9	-1	70141578	3703
ENSMUSG00000032224	protein_coding	Fam81a	ENSMUST00000145427	retained_intron		9	-1	70103076	362
ENSMUSG00000032224	protein_coding	Fam81a	ENSMUST00000123206	protein_coding		9	-1	70141803	478
ENSMUSG00000032224	protein_coding	Fam81a	ENSMUST00000141775	protein_coding		9	-1	70142560	613
ENSMUSG00000087571	antisense	Gm15202	ENSMUST00000154188	antisense		X	1	161908223	393
ENSMUSG00000059493	protein_coding	Nhs	ENSMUST00000087085	protein_coding	alternative2	X	-1	162159730	8805
ENSMUSG00000059493	protein_coding	Nhs	ENSMUST00000081569	protein_coding	principal3	X	-1	162159388	4881
ENSMUSG00000082625	processed_pseudogene	Gm15204	ENSMUST00000119454	processed_pseudogene		X	1	162351596	2281
ENSMUSG00000027678	protein_coding	Ncoa3	ENSMUST00000109252	protein_coding	alternative2	2	1	165992636	5757
ENSMUSG00000027678	protein_coding	Ncoa3	ENSMUST00000153507	processed_transcript		2	1	166047918	717
ENSMUSG00000032220	protein_coding	Myo1e	ENSMUST00000213863	retained_intron		9	1	70207350	1260
ENSMUSG00000027678	protein_coding	Ncoa3	ENSMUST00000139658	retained_intron		2	1	166060820	554
ENSMUSG00000027678	protein_coding	Ncoa3	ENSMUST00000139394	retained_intron		2	1	166067430	822
ENSMUSG00000027678	protein_coding	Ncoa3	ENSMUST00000088095	protein_coding	principal2	2	1	165992637	7531
ENSMUSG00000032220	protein_coding	Myo1e	ENSMUST00000214767	retained_intron		9	1	70207350	2671
ENSMUSG00000114829	processed_pseudogene	Gm9130	ENSMUST00000223821	processed_pseudogene		14	-1	66798378	523
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000090826	protein_coding	alternative1	2	1	71981240	4181
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000150234	processed_transcript		2	1	71981259	694
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000102698	protein_coding	principal3	2	1	71981287	2982
ENSMUSG00000032220	protein_coding	Myo1e	ENSMUST00000214042	nonsense_mediated_decay		9	1	70207362	4699
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000151236	processed_transcript		2	1	72140728	987
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000028525	protein_coding		2	1	72054604	4109
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000153887	processed_transcript		2	1	72179693	3539
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000149421	processed_transcript		2	1	71981247	623
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000124004	processed_transcript		2	1	72054985	438
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000122975	processed_transcript		2	1	72140711	666
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000156031	processed_transcript		2	1	72198799	664
ENSMUSG00000045594	protein_coding	Glb1	ENSMUST00000063042	protein_coding	principal1	9	1	114401076	2396
ENSMUSG00000049044	protein_coding	Rapgef4	ENSMUST00000146970	processed_transcript		2	1	72242294	500
ENSMUSG00000085001	antisense	Rapgef4os2	ENSMUST00000128165	antisense		2	-1	72232302	2116
ENSMUSG00000045594	protein_coding	Glb1	ENSMUST00000217583	nonsense_mediated_decay		9	1	114401108	2806
ENSMUSG00000079260	protein_coding	Tmppe	ENSMUST00000111820	protein_coding	principal1	9	1	114401105	2921
ENSMUSG00000047898	protein_coding	Ccr4	ENSMUST00000054414	protein_coding	principal1	9	-1	114496562	2805
ENSMUSG00000047898	protein_coding	Ccr4	ENSMUST00000215425	protein_coding	principal1	9	-1	114496038	1382
ENSMUSG00000047898	protein_coding	Ccr4	ENSMUST00000215959	protein_coding		9	-1	114504916	339
ENSMUSG00000032220	protein_coding	Myo1e	ENSMUST00000034745	protein_coding	principal1	9	1	70207368	4625
ENSMUSG00000097821	antisense	C130032M10Rik	ENSMUST00000238379	antisense		9	1	114515697	905
ENSMUSG00000097821	antisense	C130032M10Rik	ENSMUST00000180393	antisense		9	1	114515697	728
ENSMUSG00000079259	protein_coding	Trim71	ENSMUST00000111816	protein_coding	principal1	9	-1	114564369	9332
ENSMUSG00000021690	protein_coding	Jmy	ENSMUST00000065537	protein_coding	principal1	13	-1	93499808	8776
ENSMUSG00000021690	protein_coding	Jmy	ENSMUST00000220513	protein_coding		13	-1	93499737	1843
ENSMUSG00000113247	processed_pseudogene	Gm30155	ENSMUST00000223458	processed_pseudogene		13	1	93461846	339
ENSMUSG00000113237	processed_pseudogene	Gm6109	ENSMUST00000223297	processed_pseudogene		13	1	93448488	348
ENSMUSG00000040855	protein_coding	Reps2	ENSMUST00000154424	processed_transcript		X	-1	162565514	7146
ENSMUSG00000016481	protein_coding	Cr1l	ENSMUST00000193094	protein_coding	alternative2	1	-1	195131344	2776
ENSMUSG00000016481	protein_coding	Cr1l	ENSMUST00000194111	protein_coding	alternative2	1	-1	195131323	1501
ENSMUSG00000016481	protein_coding	Cr1l	ENSMUST00000194732	retained_intron		1	-1	195107368	3675
ENSMUSG00000016481	protein_coding	Cr1l	ENSMUST00000075451	protein_coding	principal2	1	-1	195131561	1651
ENSMUSG00000016481	protein_coding	Cr1l	ENSMUST00000194062	protein_coding		1	-1	195117641	561
ENSMUSG00000016481	protein_coding	Cr1l	ENSMUST00000195586	retained_intron		1	-1	195129462	991
ENSMUSG00000016481	protein_coding	Cr1l	ENSMUST00000191775	protein_coding		1	-1	195131586	913
ENSMUSG00000016481	protein_coding	Cr1l	ENSMUST00000193719	retained_intron		1	-1	195131534	3859
ENSMUSG00000016481	protein_coding	Cr1l	ENSMUST00000193829	nonsense_mediated_decay		1	-1	195131330	476
ENSMUSG00000016481	protein_coding	Cr1l	ENSMUST00000192405	retained_intron		1	-1	195131355	532
ENSMUSG00000029504	protein_coding	Ddx51	ENSMUST00000031478	protein_coding	principal1	5	1	110653451	4846
ENSMUSG00000029504	protein_coding	Ddx51	ENSMUST00000136629	retained_intron		5	1	110653546	805
ENSMUSG00000029504	protein_coding	Ddx51	ENSMUST00000136442	retained_intron		5	1	110655137	540
ENSMUSG00000040855	protein_coding	Reps2	ENSMUST00000112334	protein_coding	alternative2	X	-1	162643649	7675
ENSMUSG00000029504	protein_coding	Ddx51	ENSMUST00000143087	retained_intron		5	1	110656635	306
ENSMUSG00000040855	protein_coding	Reps2	ENSMUST00000155863	processed_transcript		X	-1	162565612	554
ENSMUSG00000029504	protein_coding	Ddx51	ENSMUST00000148773	nonsense_mediated_decay		5	1	110656862	482
ENSMUSG00000040855	protein_coding	Reps2	ENSMUST00000155043	retained_intron		X	-1	162552579	667
ENSMUSG00000040855	protein_coding	Reps2	ENSMUST00000101102	protein_coding	principal3	X	-1	162643601	7630
ENSMUSG00000082007	processed_pseudogene	Gm15206	ENSMUST00000119143	processed_pseudogene		X	-1	162577071	454
ENSMUSG00000059461	processed_pseudogene	Gm7331	ENSMUST00000118642	processed_pseudogene		X	1	162566857	387
ENSMUSG00000083963	processed_pseudogene	Gm15203	ENSMUST00000117668	processed_pseudogene		X	1	162679007	455
ENSMUSG00000082571	processed_pseudogene	Gm8737	ENSMUST00000122208	processed_pseudogene		X	1	162697612	642
ENSMUSG00000086034	processed_transcript	Gm15201	ENSMUST00000136472	processed_transcript		X	-1	162736613	1210
ENSMUSG00000032218	protein_coding	Ccnb2	ENSMUST00000034742	protein_coding	principal1	9	-1	70421547	1531
ENSMUSG00000003072	protein_coding	Atp5d	ENSMUST00000150347	processed_transcript		10	1	80138632	873
ENSMUSG00000003072	protein_coding	Atp5d	ENSMUST00000105367	protein_coding	principal1	10	1	80141457	1410
ENSMUSG00000003072	protein_coding	Atp5d	ENSMUST00000105366	protein_coding		10	1	80142370	781
ENSMUSG00000032279	protein_coding	Idh3a	ENSMUST00000217484	protein_coding		9	1	54586334	2580
ENSMUSG00000003072	protein_coding	Atp5d	ENSMUST00000003156	protein_coding	principal1	10	1	80142315	931
ENSMUSG00000032279	protein_coding	Idh3a	ENSMUST00000215273	nonsense_mediated_decay		9	1	54586481	1812
ENSMUSG00000032279	protein_coding	Idh3a	ENSMUST00000213729	retained_intron		9	1	54586510	2517
ENSMUSG00000032279	protein_coding	Idh3a	ENSMUST00000214136	retained_intron		9	1	54595094	1570
ENSMUSG00000032279	protein_coding	Idh3a	ENSMUST00000167866	protein_coding	principal1	9	1	54586511	2403
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000109353	protein_coding	principal2	15	-1	89123087	7635
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000164717	retained_intron		15	-1	89101098	1920
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000163290	nonsense_mediated_decay		15	-1	89102603	1328
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000041656	protein_coding	alternative2	15	-1	89122886	5357
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000166994	retained_intron		15	-1	89101543	953
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000169208	retained_intron		15	-1	89101279	514
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000166480	nonsense_mediated_decay		15	-1	89102014	759
ENSMUSG00000028270	protein_coding	Gbp2	ENSMUST00000165774	protein_coding	principal1	3	1	142620602	2516
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000168256	retained_intron		15	-1	89102180	802
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000170877	nonsense_mediated_decay		15	-1	89102372	508
ENSMUSG00000028270	protein_coding	Gbp2	ENSMUST00000169572	nonsense_mediated_decay		3	1	142620635	853
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000169069	nonsense_mediated_decay		15	-1	89107429	586
ENSMUSG00000051786	protein_coding	Tubgcp6	ENSMUST00000231098	retained_intron		15	-1	89123112	4674
ENSMUSG00000035757	protein_coding	Selenoo	ENSMUST00000130700	nonsense_mediated_decay		15	1	89089084	2688
ENSMUSG00000035757	protein_coding	Selenoo	ENSMUST00000082439	protein_coding	principal1	15	1	89089084	2383
ENSMUSG00000022048	protein_coding	Dpysl2	ENSMUST00000022629	protein_coding	principal1	14	-1	66868688	4520
ENSMUSG00000003068	protein_coding	Stk11	ENSMUST00000144883	nonsense_mediated_decay		10	1	80115803	3663
ENSMUSG00000105170	processed_pseudogene	Gm19166	ENSMUST00000196041	processed_pseudogene		3	-1	142665506	1063
ENSMUSG00000105317	unprocessed_pseudogene	Gbp2-ps	ENSMUST00000198870	unprocessed_pseudogene		3	1	142658948	1387
ENSMUSG00000003068	protein_coding	Stk11	ENSMUST00000003152	protein_coding	principal1	10	1	80115803	2566
ENSMUSG00000003068	protein_coding	Stk11	ENSMUST00000105371	nonsense_mediated_decay		10	1	80116347	1619
ENSMUSG00000003068	protein_coding	Stk11	ENSMUST00000128992	processed_transcript		10	1	80116354	704
ENSMUSG00000003068	protein_coding	Stk11	ENSMUST00000144119	retained_intron		10	1	80124819	948
ENSMUSG00000003068	protein_coding	Stk11	ENSMUST00000129235	retained_intron		10	1	80125375	671
ENSMUSG00000003068	protein_coding	Stk11	ENSMUST00000105370	protein_coding		10	1	80125375	1474
ENSMUSG00000003068	protein_coding	Stk11	ENSMUST00000144108	retained_intron		10	1	80126386	750
ENSMUSG00000003068	protein_coding	Stk11	ENSMUST00000152592	protein_coding		10	1	80126682	723
ENSMUSG00000032217	protein_coding	Rnf111	ENSMUST00000213208	retained_intron		9	-1	70453958	3293
ENSMUSG00000056167	protein_coding	Cnot10	ENSMUST00000070117	protein_coding	principal1	9	-1	114640074	2853
ENSMUSG00000024242	protein_coding	Map4k3	ENSMUST00000234200	retained_intron		17	-1	80583514	2372
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000105369	protein_coding	principal2	10	-1	80139365	3121
ENSMUSG00000056167	protein_coding	Cnot10	ENSMUST00000217148	nonsense_mediated_decay		9	-1	114640066	3466
ENSMUSG00000024242	protein_coding	Map4k3	ENSMUST00000234585	retained_intron		17	-1	80624986	3769
ENSMUSG00000056167	protein_coding	Cnot10	ENSMUST00000215155	nonsense_mediated_decay		9	-1	114640180	3437
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000147778	nonsense_mediated_decay		10	-1	80139365	3175
ENSMUSG00000056167	protein_coding	Cnot10	ENSMUST00000217296	retained_intron		9	-1	114640098	4866
ENSMUSG00000056167	protein_coding	Cnot10	ENSMUST00000216785	protein_coding		9	-1	114640184	1723
ENSMUSG00000056167	protein_coding	Cnot10	ENSMUST00000213539	retained_intron		9	-1	114640085	1441
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000146180	retained_intron		10	-1	80134681	771
ENSMUSG00000056167	protein_coding	Cnot10	ENSMUST00000213955	nonsense_mediated_decay		9	-1	114640047	753
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000132317	retained_intron		10	-1	80135588	663
ENSMUSG00000056167	protein_coding	Cnot10	ENSMUST00000215701	processed_transcript		9	-1	114639963	487
ENSMUSG00000056167	protein_coding	Cnot10	ENSMUST00000238809	protein_coding		9	-1	114640181	619
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000132523	nonsense_mediated_decay		10	-1	80139363	938
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000123967	nonsense_mediated_decay		10	-1	80139178	718
ENSMUSG00000111744	processed_pseudogene	Gm7780	ENSMUST00000214787	processed_pseudogene		9	-1	114648035	406
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000149242	processed_transcript		10	-1	80137924	394
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000128488	processed_transcript		10	-1	80137911	444
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000128465	processed_transcript		10	-1	80137352	211
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000136260	retained_intron		10	-1	80137647	601
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000127515	retained_intron		10	-1	80137594	372
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000138776	processed_transcript		10	-1	80138616	437
ENSMUSG00000032435	protein_coding	Dync1li1	ENSMUST00000215345	retained_intron		9	1	114688790	1930
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000142853	protein_coding		10	-1	80140835	497
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000170219	protein_coding	principal2	10	-1	80137387	2941
ENSMUSG00000035640	protein_coding	Cbarp	ENSMUST00000169546	protein_coding	alternative2	10	-1	80137387	2980
ENSMUSG00000105161	lincRNA	Gm42595	ENSMUST00000196771	lincRNA		5	1	110661392	1607
ENSMUSG00000032435	protein_coding	Dync1li1	ENSMUST00000047404	protein_coding	principal1	9	1	114688790	2601
ENSMUSG00000032434	protein_coding	Cmtm6	ENSMUST00000217637	processed_transcript		9	1	114731116	350
ENSMUSG00000074768	protein_coding	Bhmt	ENSMUST00000099309	protein_coding	principal1	13	-1	93637961	2490
ENSMUSG00000032434	protein_coding	Cmtm6	ENSMUST00000035007	protein_coding	principal1	9	1	114731173	3383
ENSMUSG00000074768	protein_coding	Bhmt	ENSMUST00000124193	retained_intron		13	-1	93637566	3963
ENSMUSG00000085834	antisense	Gm15622	ENSMUST00000143025	antisense		13	1	93625382	1464
ENSMUSG00000052724	antisense	Gm9888	ENSMUST00000150678	antisense		9	1	114780100	965
ENSMUSG00000024242	protein_coding	Map4k3	ENSMUST00000234133	protein_coding	alternative1	17	-1	80728024	4088
ENSMUSG00000024242	protein_coding	Map4k3	ENSMUST00000025089	protein_coding	principal2	17	-1	80728093	4220
ENSMUSG00000024242	protein_coding	Map4k3	ENSMUST00000234481	retained_intron		17	-1	80651150	3647
ENSMUSG00000032436	protein_coding	Cmtm7	ENSMUST00000035009	protein_coding	principal1	9	-1	114781849	993
ENSMUSG00000024242	protein_coding	Map4k3	ENSMUST00000234249	processed_transcript		17	-1	80728485	484
ENSMUSG00000024242	protein_coding	Map4k3	ENSMUST00000234486	retained_intron		17	-1	80728025	561
ENSMUSG00000024242	protein_coding	Map4k3	ENSMUST00000112389	protein_coding	alternative1	17	-1	80728093	4231
ENSMUSG00000032436	protein_coding	Cmtm7	ENSMUST00000084867	protein_coding		9	-1	114781832	874
ENSMUSG00000032436	protein_coding	Cmtm7	ENSMUST00000214604	retained_intron		9	-1	114781856	2183
ENSMUSG00000075553	lincRNA	Gm5464	ENSMUST00000225817	lincRNA		14	1	66868850	2874
ENSMUSG00000075553	lincRNA	Gm5464	ENSMUST00000100453	lincRNA		14	1	66868850	2156
ENSMUSG00000032436	protein_coding	Cmtm7	ENSMUST00000217056	processed_transcript		9	-1	114775451	345
ENSMUSG00000032436	protein_coding	Cmtm7	ENSMUST00000216760	protein_coding		9	-1	114781842	665
ENSMUSG00000032217	protein_coding	Rnf111	ENSMUST00000215848	protein_coding	alternative2	9	-1	70503354	4712
ENSMUSG00000032217	protein_coding	Rnf111	ENSMUST00000034739	protein_coding	principal2	9	-1	70503725	4880
ENSMUSG00000046204	protein_coding	Pnma2	ENSMUST00000089236	protein_coding	principal1	14	1	66911170	5518
ENSMUSG00000032217	protein_coding	Rnf111	ENSMUST00000213647	protein_coding	alternative2	9	-1	70503378	4961
ENSMUSG00000041012	protein_coding	Cmtm8	ENSMUST00000047013	protein_coding	principal1	9	-1	114844152	1064
ENSMUSG00000046204	protein_coding	Pnma2	ENSMUST00000122431	protein_coding	principal1	14	1	66911208	3143
ENSMUSG00000032217	protein_coding	Rnf111	ENSMUST00000213996	retained_intron		9	-1	70430151	671
ENSMUSG00000032217	protein_coding	Rnf111	ENSMUST00000215948	retained_intron		9	-1	70453846	2266
ENSMUSG00000046204	protein_coding	Pnma2	ENSMUST00000168010	processed_transcript		14	1	66911242	472
ENSMUSG00000041012	protein_coding	Cmtm8	ENSMUST00000213264	retained_intron		9	-1	114844101	657
ENSMUSG00000046204	protein_coding	Pnma2	ENSMUST00000165831	processed_transcript		14	1	66914316	855
ENSMUSG00000041012	protein_coding	Cmtm8	ENSMUST00000213929	retained_intron		9	-1	114844156	2547
ENSMUSG00000032217	protein_coding	Rnf111	ENSMUST00000213694	retained_intron		9	-1	70503724	3555
ENSMUSG00000032217	protein_coding	Rnf111	ENSMUST00000113595	protein_coding	principal2	9	-1	70503354	4735
ENSMUSG00000038000	protein_coding	Acd	ENSMUST00000211870	nonsense_mediated_decay		8	-1	105701085	2722
ENSMUSG00000032281	protein_coding	Acsbg1	ENSMUST00000034822	protein_coding	principal1	9	-1	54661870	2880
ENSMUSG00000032281	protein_coding	Acsbg1	ENSMUST00000138315	protein_coding		9	-1	54643158	358
ENSMUSG00000032281	protein_coding	Acsbg1	ENSMUST00000128163	protein_coding		9	-1	54647346	668
ENSMUSG00000032281	protein_coding	Acsbg1	ENSMUST00000128624	protein_coding		9	-1	54661695	407
ENSMUSG00000032281	protein_coding	Acsbg1	ENSMUST00000132914	retained_intron		9	-1	54647217	345
ENSMUSG00000104220	TEC	4930578I07Rik	ENSMUST00000193416	TEC		14	1	66937365	1372
ENSMUSG00000114558	processed_pseudogene	Gm9570	ENSMUST00000224795	processed_pseudogene		14	1	66967182	2372
ENSMUSG00000038000	protein_coding	Acd	ENSMUST00000042608	protein_coding	principal1	8	-1	105701084	3154
ENSMUSG00000038000	protein_coding	Acd	ENSMUST00000212687	retained_intron		8	-1	105699821	1041
ENSMUSG00000038000	protein_coding	Acd	ENSMUST00000212642	nonsense_mediated_decay		8	-1	105701053	1182
ENSMUSG00000038000	protein_coding	Acd	ENSMUST00000212650	nonsense_mediated_decay		8	-1	105701102	1408
ENSMUSG00000050357	protein_coding	Carmil2	ENSMUST00000213019	protein_coding	principal1	8	1	105686274	4194
ENSMUSG00000050627	protein_coding	Gpd1l	ENSMUST00000146623	protein_coding	principal1	9	-1	114933987	4391
ENSMUSG00000050627	protein_coding	Gpd1l	ENSMUST00000129305	protein_coding		9	-1	114909076	2543
ENSMUSG00000086561	antisense	Gm15540	ENSMUST00000136052	antisense		3	-1	142744681	674
ENSMUSG00000050627	protein_coding	Gpd1l	ENSMUST00000084853	protein_coding		9	-1	114933879	1436
ENSMUSG00000050627	protein_coding	Gpd1l	ENSMUST00000146266	processed_transcript		9	-1	114919354	523
ENSMUSG00000050357	protein_coding	Carmil2	ENSMUST00000062574	retained_intron		8	1	105690906	2526
ENSMUSG00000050357	protein_coding	Carmil2	ENSMUST00000212643	retained_intron		8	1	105695064	2235
ENSMUSG00000098191	antisense	Gm26962	ENSMUST00000182545	antisense		9	-1	115196898	265
ENSMUSG00000050621	protein_coding	Rps27rt	ENSMUST00000053150	protein_coding	principal1	9	-1	114982739	374
ENSMUSG00000098127	antisense	Gm4665	ENSMUST00000183244	antisense		9	-1	115186058	561
ENSMUSG00000097967	sense_intronic	Gm27002	ENSMUST00000182789	sense_intronic		9	1	115200398	620
ENSMUSG00000080763	processed_pseudogene	Gm12341	ENSMUST00000119724	processed_pseudogene		11	1	76514069	503
ENSMUSG00000024205	processed_pseudogene	Rpl36-ps2	ENSMUST00000136893	processed_pseudogene		11	1	76601319	311
ENSMUSG00000040875	protein_coding	Osbpl10	ENSMUST00000183104	protein_coding	principal1	9	1	114978569	2477
ENSMUSG00000040875	protein_coding	Osbpl10	ENSMUST00000182384	protein_coding		9	1	114990748	2158
ENSMUSG00000040875	protein_coding	Osbpl10	ENSMUST00000183141	protein_coding		9	1	114998616	1089
ENSMUSG00000040875	protein_coding	Osbpl10	ENSMUST00000182199	nonsense_mediated_decay		9	1	115016663	2196
ENSMUSG00000040875	protein_coding	Osbpl10	ENSMUST00000182920	protein_coding		9	1	115054341	448
ENSMUSG00000040875	protein_coding	Osbpl10	ENSMUST00000182363	protein_coding		9	1	115088841	2766
ENSMUSG00000040875	protein_coding	Osbpl10	ENSMUST00000182413	processed_transcript		9	1	115120539	831
ENSMUSG00000040875	protein_coding	Osbpl10	ENSMUST00000046627	protein_coding		9	1	115067279	1872
ENSMUSG00000040213	protein_coding	Kyat3	ENSMUST00000106218	protein_coding	principal1	3	1	142701051	1888
ENSMUSG00000040213	protein_coding	Kyat3	ENSMUST00000044392	protein_coding		3	1	142701080	4206
ENSMUSG00000040213	protein_coding	Kyat3	ENSMUST00000199519	protein_coding		3	1	142701086	675
ENSMUSG00000031353	protein_coding	Rbbp7	ENSMUST00000033720	protein_coding	principal1	X	1	162760402	2244
ENSMUSG00000032437	protein_coding	Stt3b	ENSMUST00000035010	protein_coding	principal1	9	-1	115310421	4221
ENSMUSG00000040213	protein_coding	Kyat3	ENSMUST00000129775	nonsense_mediated_decay		3	1	142701094	1798
ENSMUSG00000031353	protein_coding	Rbbp7	ENSMUST00000112327	protein_coding		X	1	162760421	1862
ENSMUSG00000111564	processed_pseudogene	Stmn1-rs1	ENSMUST00000214793	processed_pseudogene		9	-1	115281981	462
ENSMUSG00000040213	protein_coding	Kyat3	ENSMUST00000137623	processed_transcript		3	1	142723115	734
ENSMUSG00000040213	protein_coding	Kyat3	ENSMUST00000196928	retained_intron		3	1	142728394	1961
ENSMUSG00000040213	protein_coding	Kyat3	ENSMUST00000198957	retained_intron		3	1	142737612	3335
ENSMUSG00000111530	processed_pseudogene	Gm9487	ENSMUST00000216600	processed_pseudogene		9	1	115405149	472
ENSMUSG00000031353	protein_coding	Rbbp7	ENSMUST00000112326	protein_coding		X	1	162760462	1430
ENSMUSG00000040213	protein_coding	Kyat3	ENSMUST00000128096	processed_transcript		3	1	142738511	381
ENSMUSG00000031353	protein_coding	Rbbp7	ENSMUST00000138791	protein_coding		X	1	162761066	705
ENSMUSG00000074034	processed_pseudogene	Gm5921	ENSMUST00000075898	processed_pseudogene		9	-1	115438581	882
ENSMUSG00000031353	protein_coding	Rbbp7	ENSMUST00000143681	protein_coding		X	1	162774578	784
ENSMUSG00000112121	lincRNA	C230072F16Rik	ENSMUST00000220322	lincRNA		17	1	80896793	1136
ENSMUSG00000111398	processed_transcript	D330037F02Rik	ENSMUST00000217400	lincRNA		9	1	115665914	1247
ENSMUSG00000111398	processed_transcript	D330037F02Rik	ENSMUST00000215827	retained_intron		9	1	115665966	4953
ENSMUSG00000112121	lincRNA	C230072F16Rik	ENSMUST00000219184	lincRNA		17	1	80896800	1253
ENSMUSG00000112121	lincRNA	C230072F16Rik	ENSMUST00000220067	lincRNA		17	1	80896840	436
ENSMUSG00000110905	lincRNA	Gm48007	ENSMUST00000215982	lincRNA		9	1	115680743	417
ENSMUSG00000056880	protein_coding	Gadl1	ENSMUST00000121770	protein_coding	principal1	9	1	115937142	1763
ENSMUSG00000056880	protein_coding	Gadl1	ENSMUST00000119291	protein_coding		9	1	115909455	1729
ENSMUSG00000056880	protein_coding	Gadl1	ENSMUST00000069651	protein_coding	principal1	9	1	115909455	3652
ENSMUSG00000087469	antisense	Gm16142	ENSMUST00000130584	antisense		9	-1	116001788	2850
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000195120	protein_coding		1	-1	195176716	6212
ENSMUSG00000080848	processed_pseudogene	Gm9385	ENSMUST00000117563	processed_pseudogene		9	-1	116041064	472
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000193356	nonsense_mediated_decay		1	-1	195159752	2736
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000192604	retained_intron		1	-1	195154237	974
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000238929	retained_intron		1	-1	195163618	3220
ENSMUSG00000038344	protein_coding	Txlng	ENSMUST00000041370	protein_coding	principal3	X	-1	162829454	3862
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000193436	protein_coding		1	-1	195151590	355
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000193801	protein_coding		1	-1	195176648	206
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000195737	retained_intron		1	-1	195154328	1000
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000210219	protein_coding	principal1	1	-1	195176610	4227
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000194149	processed_transcript		1	-1	195168417	751
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000195347	processed_transcript		1	-1	195176715	357
ENSMUSG00000038344	protein_coding	Txlng	ENSMUST00000112316	protein_coding	alternative2	X	-1	162829454	3715
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000195722	processed_transcript		1	-1	195176715	689
ENSMUSG00000038344	protein_coding	Txlng	ENSMUST00000112315	protein_coding		X	-1	162829454	2525
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000082321	protein_coding		1	-1	195176715	6207
ENSMUSG00000026616	protein_coding	Cr2	ENSMUST00000043104	protein_coding		1	-1	195171168	1044
ENSMUSG00000038344	protein_coding	Txlng	ENSMUST00000112314	protein_coding		X	-1	162812633	3348
ENSMUSG00000038344	protein_coding	Txlng	ENSMUST00000150080	processed_transcript		X	-1	162829454	295
ENSMUSG00000110867	processed_pseudogene	Gm7368	ENSMUST00000213307	processed_pseudogene		9	-1	54691502	367
ENSMUSG00000038344	protein_coding	Txlng	ENSMUST00000131463	retained_intron		X	-1	162812481	5399
ENSMUSG00000071040	processed_pseudogene	Gm9386	ENSMUST00000095195	processed_pseudogene		17	-1	80938714	369
ENSMUSG00000022051	protein_coding	Bnip3l	ENSMUST00000111115	protein_coding		14	-1	67008856	3259
ENSMUSG00000022051	protein_coding	Bnip3l	ENSMUST00000022634	protein_coding	principal1	14	-1	67008877	3238
ENSMUSG00000022051	protein_coding	Bnip3l	ENSMUST00000138160	processed_transcript		14	-1	66989841	789
ENSMUSG00000022051	protein_coding	Bnip3l	ENSMUST00000151059	processed_transcript		14	-1	66999905	492
ENSMUSG00000022051	protein_coding	Bnip3l	ENSMUST00000142593	processed_transcript		14	-1	67000508	446
ENSMUSG00000022051	protein_coding	Bnip3l	ENSMUST00000135703	processed_transcript		14	-1	66999725	354
ENSMUSG00000022051	protein_coding	Bnip3l	ENSMUST00000129605	retained_intron		14	-1	66999657	540
ENSMUSG00000024245	protein_coding	Tmem178	ENSMUST00000025092	protein_coding	principal1	17	1	80944632	1696
ENSMUSG00000028271	protein_coding	Gtf2b	ENSMUST00000029938	protein_coding	principal1	3	1	142765045	1455
ENSMUSG00000028271	protein_coding	Gtf2b	ENSMUST00000196311	retained_intron		3	1	142765223	3200
ENSMUSG00000102236	TEC	Gm37887	ENSMUST00000192752	TEC		1	-1	195222766	2716
ENSMUSG00000032440	protein_coding	Tgfbr2	ENSMUST00000061101	protein_coding		9	-1	116175265	8092
ENSMUSG00000032212	protein_coding	Sltm	ENSMUST00000216816	protein_coding	alternative2	9	1	70542754	3755
ENSMUSG00000032212	protein_coding	Sltm	ENSMUST00000215714	retained_intron		9	1	70542794	1066
ENSMUSG00000032440	protein_coding	Tgfbr2	ENSMUST00000035014	protein_coding	principal1	9	-1	116175360	3476
ENSMUSG00000032212	protein_coding	Sltm	ENSMUST00000213808	nonsense_mediated_decay		9	1	70542859	1124
ENSMUSG00000032212	protein_coding	Sltm	ENSMUST00000049263	protein_coding	principal2	9	1	70542870	3691
ENSMUSG00000111243	lincRNA	Gm4668	ENSMUST00000214742	lincRNA		9	1	116189180	943
ENSMUSG00000111729	lincRNA	Gm48038	ENSMUST00000214749	lincRNA		9	1	116199297	387
ENSMUSG00000032212	protein_coding	Sltm	ENSMUST00000217593	nonsense_mediated_decay		9	1	70542880	3319
ENSMUSG00000032212	protein_coding	Sltm	ENSMUST00000213362	retained_intron		9	1	70542898	3042
ENSMUSG00000111324	lincRNA	Gm31410	ENSMUST00000217302	lincRNA		9	1	116218802	4048
ENSMUSG00000032212	protein_coding	Sltm	ENSMUST00000214834	retained_intron		9	1	70575408	1786
ENSMUSG00000032212	protein_coding	Sltm	ENSMUST00000216881	retained_intron		9	1	70581465	2915
ENSMUSG00000110752	lincRNA	D730003K21Rik	ENSMUST00000215052	lincRNA		9	1	116327337	589
ENSMUSG00000110752	lincRNA	D730003K21Rik	ENSMUST00000217456	lincRNA		9	1	116331168	533
ENSMUSG00000084022	processed_pseudogene	Gm16459	ENSMUST00000121443	processed_pseudogene		X	1	162844838	686
ENSMUSG00000082539	processed_pseudogene	Gm15207	ENSMUST00000119259	processed_pseudogene		X	-1	162846266	442
ENSMUSG00000032285	protein_coding	Dnaja4	ENSMUST00000120452	protein_coding	principal1	9	1	54698873	1827
ENSMUSG00000032285	protein_coding	Dnaja4	ENSMUST00000154690	protein_coding		9	1	54699514	756
ENSMUSG00000032285	protein_coding	Dnaja4	ENSMUST00000070070	protein_coding	principal1	9	1	54699559	3003
ENSMUSG00000031357	protein_coding	Syap1	ENSMUST00000033723	protein_coding	principal1	X	-1	162888447	2087
ENSMUSG00000031357	protein_coding	Syap1	ENSMUST00000134629	retained_intron		X	-1	162863472	720
ENSMUSG00000081917	processed_pseudogene	Gm15209	ENSMUST00000117703	processed_pseudogene		X	-1	162895154	400
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000094012	protein_coding		11	-1	76509419	5236
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000072740	protein_coding	principal4	11	-1	76571535	5394
ENSMUSG00000092504	processed_pseudogene	Gm20396	ENSMUST00000173358	processed_pseudogene		9	1	117402979	745
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000238684	protein_coding		11	-1	76623558	6271
ENSMUSG00000092184	processed_pseudogene	Gm18489	ENSMUST00000172565	processed_pseudogene		9	1	117059158	551
ENSMUSG00000092516	processed_pseudogene	Gm20397	ENSMUST00000174520	processed_pseudogene		9	1	117065527	362
ENSMUSG00000079669	processed_transcript	Gm17396	ENSMUST00000172075	processed_transcript		9	1	117252536	1655
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000065028	protein_coding		11	-1	76468465	4444
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000108408	protein_coding	alternative1	11	-1	76495456	3534
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000131059	processed_transcript		11	-1	76437220	717
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000130364	nonsense_mediated_decay		11	-1	76468298	803
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000141442	retained_intron		11	-1	76495005	2392
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000151526	protein_coding		11	-1	76493929	784
ENSMUSG00000061559	protein_coding	Wdr61	ENSMUST00000118771	protein_coding		9	-1	54734482	3372
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000176179	protein_coding		11	-1	76577727	683
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000176024	protein_coding		11	-1	76613395	410
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000137261	processed_transcript		11	-1	76494984	2009
ENSMUSG00000017631	protein_coding	Abr	ENSMUST00000108407	protein_coding	alternative1	11	-1	76508995	4811
ENSMUSG00000061559	protein_coding	Wdr61	ENSMUST00000130368	protein_coding		9	-1	54734497	1162
ENSMUSG00000099648	processed_pseudogene	Gm5975	ENSMUST00000185256	processed_pseudogene		1	-1	52289095	1399
ENSMUSG00000061559	protein_coding	Wdr61	ENSMUST00000051822	protein_coding	principal1	9	-1	54734517	1187
ENSMUSG00000061559	protein_coding	Wdr61	ENSMUST00000121204	protein_coding	principal1	9	-1	54734519	1290
ENSMUSG00000061559	protein_coding	Wdr61	ENSMUST00000144365	retained_intron		9	-1	54720814	665
ENSMUSG00000061559	protein_coding	Wdr61	ENSMUST00000148494	retained_intron		9	-1	54724357	710
ENSMUSG00000061559	protein_coding	Wdr61	ENSMUST00000127451	protein_coding		9	-1	54734502	784
ENSMUSG00000042444	protein_coding	Mindy2	ENSMUST00000049031	protein_coding	principal2	9	-1	70657174	8081
ENSMUSG00000042444	protein_coding	Mindy2	ENSMUST00000213380	protein_coding	alternative2	9	-1	70657151	2521
ENSMUSG00000104297	TEC	Gm38046	ENSMUST00000192733	TEC		1	-1	195259848	550
ENSMUSG00000042444	protein_coding	Mindy2	ENSMUST00000214293	retained_intron		9	-1	70657147	1779
ENSMUSG00000074213	antisense	Gm10642	ENSMUST00000238671	antisense		9	1	70656251	1612
ENSMUSG00000042118	protein_coding	Bhmt2	ENSMUST00000015941	protein_coding	principal1	13	-1	93674302	2467
ENSMUSG00000074213	antisense	Gm10642	ENSMUST00000098589	antisense		9	1	70656251	1610
ENSMUSG00000024246	protein_coding	Thumpd2	ENSMUST00000025093	protein_coding	principal1	17	-1	81065067	1833
ENSMUSG00000024246	protein_coding	Thumpd2	ENSMUST00000234801	nonsense_mediated_decay		17	-1	81065082	2239
ENSMUSG00000102307	TEC	Gm38194	ENSMUST00000194529	TEC		1	1	195321283	2211
ENSMUSG00000040808	protein_coding	S100g	ENSMUST00000038769	protein_coding	principal1	X	-1	162964599	480
ENSMUSG00000034160	protein_coding	Ogt	ENSMUST00000119299	protein_coding	alternative1	X	1	101640060	3840
ENSMUSG00000034160	protein_coding	Ogt	ENSMUST00000155713	retained_intron		X	1	101640062	1317
ENSMUSG00000034160	protein_coding	Ogt	ENSMUST00000044475	protein_coding	principal3	X	1	101640064	5384
ENSMUSG00000034160	protein_coding	Ogt	ENSMUST00000153979	processed_transcript		X	1	101640094	1066
ENSMUSG00000034160	protein_coding	Ogt	ENSMUST00000150161	retained_intron		X	1	101640108	3087
ENSMUSG00000034160	protein_coding	Ogt	ENSMUST00000155792	retained_intron		X	1	101640140	1333
ENSMUSG00000034160	protein_coding	Ogt	ENSMUST00000147635	processed_transcript		X	1	101655345	3521
ENSMUSG00000117496	processed_pseudogene	Gm50042	ENSMUST00000234904	processed_pseudogene		17	-1	81246738	379
ENSMUSG00000117558	processed_pseudogene	Gm50043	ENSMUST00000234048	processed_pseudogene		17	-1	81297744	445
ENSMUSG00000054640	protein_coding	Slc8a1	ENSMUST00000234131	protein_coding	alternative2	17	-1	81649608	18464
ENSMUSG00000054640	protein_coding	Slc8a1	ENSMUST00000235015	protein_coding		17	-1	81738377	3339
ENSMUSG00000054640	protein_coding	Slc8a1	ENSMUST00000163123	protein_coding	principal3	17	-1	81738377	3180
ENSMUSG00000054640	protein_coding	Slc8a1	ENSMUST00000234923	protein_coding		17	-1	81670187	2017
ENSMUSG00000054640	protein_coding	Slc8a1	ENSMUST00000086538	protein_coding	principal3	17	-1	81649607	2913
ENSMUSG00000054640	protein_coding	Slc8a1	ENSMUST00000163680	protein_coding	alternative1	17	-1	81649607	2913
ENSMUSG00000117413	antisense	Gm50044	ENSMUST00000234591	antisense		17	1	81370833	629
ENSMUSG00000022052	protein_coding	Ppp2r2a	ENSMUST00000089230	protein_coding	principal1	14	-1	67072444	4010
ENSMUSG00000022052	protein_coding	Ppp2r2a	ENSMUST00000225380	protein_coding		14	-1	67072435	1988
ENSMUSG00000022052	protein_coding	Ppp2r2a	ENSMUST00000225251	nonsense_mediated_decay		14	-1	67072182	2192
ENSMUSG00000022052	protein_coding	Ppp2r2a	ENSMUST00000223630	retained_intron		14	-1	67024659	1845
ENSMUSG00000022052	protein_coding	Ppp2r2a	ENSMUST00000225469	processed_transcript		14	-1	67043529	770
ENSMUSG00000082729	processed_pseudogene	Gm14845	ENSMUST00000121259	processed_pseudogene		X	-1	101691850	306
ENSMUSG00000118478	unitary_pseudogene	Gm50476	ENSMUST00000238195	unitary_pseudogene		X	1	101707020	546
ENSMUSG00000084197	processed_pseudogene	Gm9089	ENSMUST00000122027	processed_pseudogene		X	-1	101709561	526
ENSMUSG00000050232	protein_coding	Cxcr3	ENSMUST00000056614	protein_coding	principal1	X	-1	101734269	1731
ENSMUSG00000084284	processed_pseudogene	Tpt1-ps6	ENSMUST00000121768	processed_pseudogene		X	1	101768535	523
ENSMUSG00000082541	processed_pseudogene	Gm9095	ENSMUST00000117607	processed_pseudogene		X	1	101787766	881
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238694	antisense		12	1	109603808	1602
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238296	antisense		12	1	109603819	1704
ENSMUSG00000045010	protein_coding	Gm4779	ENSMUST00000124577	nonsense_mediated_decay		X	-1	101793263	1190
ENSMUSG00000045010	protein_coding	Gm4779	ENSMUST00000147742	protein_coding	principal1	X	-1	101794423	1991
ENSMUSG00000045010	protein_coding	Gm4779	ENSMUST00000056225	protein_coding		X	-1	101793308	672
ENSMUSG00000114697	lincRNA	Gm30806	ENSMUST00000225163	lincRNA		14	1	67169588	1138
ENSMUSG00000093744	lincRNA	Gm20675	ENSMUST00000175861	lincRNA		14	-1	67233129	338
ENSMUSG00000097897	processed_pseudogene	Rpl31-ps25	ENSMUST00000181557	processed_pseudogene		17	-1	81791933	379
ENSMUSG00000117397	processed_pseudogene	Gm4599	ENSMUST00000234632	processed_pseudogene		17	-1	81956273	823
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238751	antisense		12	1	109603825	1674
ENSMUSG00000117507	processed_pseudogene	Gm50045	ENSMUST00000234943	processed_pseudogene		17	-1	82192609	642
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000182119	antisense		12	1	109603936	859
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000183215	antisense		12	1	109603945	880
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238716	antisense		12	1	109603967	1220
ENSMUSG00000046774	protein_coding	8030474K03Rik	ENSMUST00000163399	nonsense_mediated_decay		X	1	101794656	1991
ENSMUSG00000046774	protein_coding	8030474K03Rik	ENSMUST00000151231	protein_coding	principal1	X	1	101794656	1940
ENSMUSG00000046774	protein_coding	8030474K03Rik	ENSMUST00000149761	processed_transcript		X	1	101794686	1050
ENSMUSG00000117643	processed_pseudogene	Gm9390	ENSMUST00000234825	processed_pseudogene		17	1	82355393	692
ENSMUSG00000117438	processed_pseudogene	Rpsa-ps7	ENSMUST00000234808	processed_pseudogene		17	-1	82410819	885
ENSMUSG00000081230	processed_pseudogene	Gm9097	ENSMUST00000120514	processed_pseudogene		X	-1	101801290	880
ENSMUSG00000073371	processed_pseudogene	Gm6594	ENSMUST00000097278	processed_pseudogene		17	1	82539260	286
ENSMUSG00000118638	protein_coding	AL805980.1	ENSMUST00000239206	protein_coding	principal1	X	-1	101821977	2017
ENSMUSG00000117472	processed_pseudogene	Gm4601	ENSMUST00000234284	processed_pseudogene		17	1	82955996	738
ENSMUSG00000082284	processed_pseudogene	H3f3a-ps1	ENSMUST00000119546	processed_pseudogene		X	1	101824515	410
ENSMUSG00000100154	lincRNA	Gm29052	ENSMUST00000187700	lincRNA		17	1	83068905	1451
ENSMUSG00000117399	processed_transcript	Gm19689	ENSMUST00000234063	lincRNA		17	-1	83078225	1541
ENSMUSG00000117399	processed_transcript	Gm19689	ENSMUST00000234397	retained_intron		17	-1	83078426	1929
ENSMUSG00000117509	lincRNA	Gm46606	ENSMUST00000235082	lincRNA		17	-1	83120741	696
ENSMUSG00000117509	lincRNA	Gm46606	ENSMUST00000234289	lincRNA		17	-1	83115635	445
ENSMUSG00000024247	protein_coding	Pkdcc	ENSMUST00000170794	protein_coding	principal1	17	1	83215292	2446
ENSMUSG00000024247	protein_coding	Pkdcc	ENSMUST00000166528	processed_transcript		17	1	83220102	593
ENSMUSG00000024247	protein_coding	Pkdcc	ENSMUST00000170758	protein_coding		17	1	83220102	672
ENSMUSG00000024247	protein_coding	Pkdcc	ENSMUST00000168118	processed_transcript		17	1	83221035	914
ENSMUSG00000085618	lincRNA	Gm11466	ENSMUST00000148017	lincRNA		2	-1	166190862	291
ENSMUSG00000085046	lincRNA	Gm11467	ENSMUST00000129407	lincRNA		2	-1	166208627	674
ENSMUSG00000094256	processed_pseudogene	Rpl21-ps7	ENSMUST00000077420	processed_pseudogene		17	1	83288546	515
ENSMUSG00000097858	lincRNA	9530052C20Rik	ENSMUST00000181882	lincRNA		3	1	142882495	1372
ENSMUSG00000106550	processed_transcript	Gm43646	ENSMUST00000199962	processed_transcript		3	1	142881588	464
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000043812	protein_coding	principal2	3	-1	142882004	6207
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238468	antisense		12	1	109603975	3223
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238636	antisense		12	1	109604028	1383
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000173913	nonsense_mediated_decay		3	-1	142881915	2924
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238248	antisense		12	1	109604037	1608
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000182689	antisense		12	1	109604046	295
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000174422	protein_coding		3	-1	142881658	2904
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238385	antisense		12	1	109605018	1767
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238720	antisense		12	1	109606265	1505
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000173830	protein_coding	alternative1	3	-1	142881658	2808
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238372	antisense		12	1	109607464	1656
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238576	antisense		12	1	109609516	1449
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238447	antisense		12	1	109613226	1390
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238430	antisense		12	1	109616061	1755
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238247	antisense		12	1	109616794	1937
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000166330	processed_transcript		3	-1	142881920	2741
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238332	antisense		12	1	109616875	2228
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000200315	retained_intron		3	-1	142803120	3087
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000182100	antisense		12	1	109617177	1274
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238403	antisense		12	1	109617265	1525
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000172521	processed_transcript		3	-1	142881990	2510
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238553	antisense		12	1	109617911	1468
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000173615	nonsense_mediated_decay		3	-1	142821598	756
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238391	antisense		12	1	109617911	1929
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000182770	antisense		12	1	109619337	1332
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000174169	retained_intron		3	-1	142812582	852
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000181527	antisense		12	1	109620375	1392
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000174680	protein_coding		3	-1	142829295	630
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000183180	antisense		12	1	109625135	633
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238554	antisense		12	1	109627149	1275
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000174099	retained_intron		3	-1	142829258	685
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000172916	retained_intron		3	-1	142881983	1206
ENSMUSG00000004591	protein_coding	Pkn2	ENSMUST00000197529	retained_intron		3	-1	142855735	2792
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000182406	antisense		12	1	109632341	5099
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238533	antisense		12	1	109633191	1943
ENSMUSG00000105671	transcribed_processed_pseudogene	Gm31306	ENSMUST00000197517	transcribed_processed_pseudogene		3	1	142898075	508
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238253	antisense		12	1	109633191	3029
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000183266	antisense		12	1	109633937	1414
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000183191	antisense		12	1	109633975	2711
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238602	antisense		12	1	109634144	2372
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238486	antisense		12	1	109636840	1686
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238303	antisense		12	1	109637620	1912
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238538	antisense		12	1	109639281	1886
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238650	antisense		12	1	109642179	1290
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000182370	antisense		12	1	109642627	1815
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238689	antisense		12	1	109642831	2364
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238258	antisense		12	1	109643339	1625
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000194138	antisense		12	1	109643942	1501
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238507	antisense		12	1	109644404	1342
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238333	antisense		12	1	109644876	2746
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238341	antisense		12	1	109644935	1832
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238736	antisense		12	1	109645459	3430
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238656	antisense		12	1	109645915	1236
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238740	antisense		12	1	109646130	1077
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238727	antisense		12	1	109646130	1196
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238494	antisense		12	1	109646130	1160
ENSMUSG00000079481	protein_coding	Nhsl2	ENSMUST00000125115	processed_transcript		X	1	101849385	2445
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000182088	antisense		12	1	109646130	1627
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238774	antisense		12	1	109646130	1685
ENSMUSG00000079481	protein_coding	Nhsl2	ENSMUST00000124279	protein_coding		X	1	101849385	647
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238763	antisense		12	1	109646130	1957
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000181253	antisense		12	1	109646130	2368
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000180876	antisense		12	1	109646162	8080
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000221135	antisense		12	1	109649605	2624
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000183026	antisense		12	1	109650072	593
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238384	antisense		12	1	109650239	2352
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000182981	antisense		12	1	109650663	1218
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000182737	antisense		12	1	109650668	1474
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238357	antisense		12	1	109650668	1651
ENSMUSG00000079481	protein_coding	Nhsl2	ENSMUST00000101339	protein_coding	principal1	X	1	101849385	12971
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238473	antisense		12	1	109650668	1689
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238513	antisense		12	1	109650668	1929
ENSMUSG00000079481	protein_coding	Nhsl2	ENSMUST00000155477	processed_transcript		X	1	101961797	431
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000182238	antisense		12	1	109650789	1480
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238295	antisense		12	1	109651340	1070
ENSMUSG00000079481	protein_coding	Nhsl2	ENSMUST00000144753	protein_coding		X	1	102005044	475
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238547	antisense		12	1	109653478	2769
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238725	antisense		12	1	109654325	1061
ENSMUSG00000079481	protein_coding	Nhsl2	ENSMUST00000144397	processed_transcript		X	1	102050851	809
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238226	antisense		12	1	109655850	761
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238532	antisense		12	1	109656240	1267
ENSMUSG00000079481	protein_coding	Nhsl2	ENSMUST00000129185	processed_transcript		X	1	102072942	3852
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000192864	retained_intron		12	1	109657288	1843
ENSMUSG00000097451	processed_transcript	Rian	ENSMUST00000238541	antisense		12	1	109658832	1498
ENSMUSG00000049191	protein_coding	Rtl5	ENSMUST00000113631	protein_coding	principal1	X	-1	102071196	4653
ENSMUSG00000049191	protein_coding	Rtl5	ENSMUST00000119076	nonsense_mediated_decay		X	-1	102071304	4325
ENSMUSG00000049191	protein_coding	Rtl5	ENSMUST00000139878	processed_transcript		X	-1	102067600	457
ENSMUSG00000049191	protein_coding	Rtl5	ENSMUST00000188731	protein_coding	principal1	X	-1	102071304	4325
ENSMUSG00000084840	lincRNA	Gm11468	ENSMUST00000152987	lincRNA		2	1	166273908	383
ENSMUSG00000032291	protein_coding	Crabp1	ENSMUST00000034830	protein_coding	principal1	9	1	54764748	802
ENSMUSG00000062444	protein_coding	Ap3b2	ENSMUST00000147624	retained_intron		7	-1	81465295	1459
ENSMUSG00000062444	protein_coding	Ap3b2	ENSMUST00000082090	protein_coding	principal2	7	-1	81493925	3806
ENSMUSG00000062444	protein_coding	Ap3b2	ENSMUST00000238438	protein_coding	alternative2	7	-1	81493679	3383
ENSMUSG00000062444	protein_coding	Ap3b2	ENSMUST00000238711	protein_coding		7	-1	81493679	3230
ENSMUSG00000062444	protein_coding	Ap3b2	ENSMUST00000152355	retained_intron		7	-1	81493706	3161
ENSMUSG00000062444	protein_coding	Ap3b2	ENSMUST00000125634	processed_transcript		7	-1	81478410	715
ENSMUSG00000062444	protein_coding	Ap3b2	ENSMUST00000238692	protein_coding		7	-1	81489810	629
ENSMUSG00000062444	protein_coding	Ap3b2	ENSMUST00000119121	processed_transcript		7	-1	81493783	875
ENSMUSG00000062444	protein_coding	Ap3b2	ENSMUST00000208911	retained_intron		7	-1	81493859	1430
ENSMUSG00000034116	protein_coding	Vav1	ENSMUST00000169220	protein_coding		17	1	57279100	2810
ENSMUSG00000034116	protein_coding	Vav1	ENSMUST00000005889	protein_coding	principal1	17	1	57279100	2963
ENSMUSG00000097011	processed_transcript	Gm4651	ENSMUST00000181738	antisense		6	1	121064464	1283
ENSMUSG00000097011	processed_transcript	Gm4651	ENSMUST00000203697	retained_intron		6	1	121064596	1524
ENSMUSG00000108171	antisense	Gm43915	ENSMUST00000203013	antisense		6	1	120958844	5037
ENSMUSG00000034116	protein_coding	Vav1	ENSMUST00000112870	protein_coding		17	1	57279127	2743
ENSMUSG00000108096	processed_pseudogene	Minpp1-ps	ENSMUST00000203344	processed_pseudogene		6	1	121116798	946
ENSMUSG00000034116	protein_coding	Vav1	ENSMUST00000174878	retained_intron		17	1	57303064	717
ENSMUSG00000034116	protein_coding	Vav1	ENSMUST00000008847	processed_transcript		17	1	57311896	1034
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000098457	processed_transcript		6	-1	121003152	6670
ENSMUSG00000027978	protein_coding	Prss12	ENSMUST00000029603	protein_coding	principal1	3	1	123446913	2602
ENSMUSG00000105784	antisense	Gm35065	ENSMUST00000199206	antisense		3	-1	123447447	428
ENSMUSG00000105058	TEC	Gm43590	ENSMUST00000195987	TEC		3	1	123471970	387
ENSMUSG00000040432	protein_coding	Ltb4r2	ENSMUST00000044554	protein_coding	principal1	14	1	55761428	1439
ENSMUSG00000040432	protein_coding	Ltb4r2	ENSMUST00000228302	retained_intron		14	1	55761436	3703
ENSMUSG00000046908	protein_coding	Ltb4r1	ENSMUST00000057569	protein_coding	principal1	14	1	55765962	1394
ENSMUSG00000093722	processed_pseudogene	Gm20612	ENSMUST00000176318	processed_pseudogene		9	1	45261055	236
ENSMUSG00000032089	protein_coding	Il10ra	ENSMUST00000034594	protein_coding	principal3	9	-1	45269149	3498
ENSMUSG00000032089	protein_coding	Il10ra	ENSMUST00000176808	nonsense_mediated_decay		9	-1	45269149	3374
ENSMUSG00000032089	protein_coding	Il10ra	ENSMUST00000176222	protein_coding	alternative2	9	-1	45269146	2799
ENSMUSG00000104960	processed_transcript	Snhg8	ENSMUST00000196466	lincRNA		3	-1	123508404	448
ENSMUSG00000104960	processed_transcript	Snhg8	ENSMUST00000198509	retained_intron		3	-1	123508330	776
ENSMUSG00000104960	processed_transcript	Snhg8	ENSMUST00000199645	lincRNA		3	-1	123508333	528
ENSMUSG00000104670	processed_pseudogene	Gm9369	ENSMUST00000196009	processed_pseudogene		3	-1	123510674	733
ENSMUSG00000004730	protein_coding	Adgre1	ENSMUST00000086763	protein_coding	principal1	17	1	57358691	3238
ENSMUSG00000004730	protein_coding	Adgre1	ENSMUST00000233376	protein_coding		17	1	57358697	342
ENSMUSG00000004730	protein_coding	Adgre1	ENSMUST00000233840	protein_coding		17	1	57358699	917
ENSMUSG00000004730	protein_coding	Adgre1	ENSMUST00000232808	protein_coding		17	1	57358700	402
ENSMUSG00000004730	protein_coding	Adgre1	ENSMUST00000004850	protein_coding	principal1	17	1	57358714	3124
ENSMUSG00000111075	processed_pseudogene	Gm47964	ENSMUST00000214313	processed_pseudogene		9	1	45301962	210
ENSMUSG00000037129	protein_coding	Tmprss13	ENSMUST00000034597	protein_coding	principal1	9	1	45319100	3245
ENSMUSG00000085831	antisense	Lncbate3	ENSMUST00000129215	antisense		9	-1	45322058	533
ENSMUSG00000085831	antisense	Lncbate3	ENSMUST00000131342	antisense		9	-1	45322079	705
ENSMUSG00000068227	protein_coding	Il2rb	ENSMUST00000089398	protein_coding	principal1	15	-1	78495271	4194
ENSMUSG00000068227	protein_coding	Il2rb	ENSMUST00000163494	protein_coding	principal1	15	-1	78493756	1895
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234400	nonsense_mediated_decay		17	-1	57545505	5094
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234299	nonsense_mediated_decay		17	-1	57545505	5018
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234878	nonsense_mediated_decay		17	-1	57545505	5106
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234443	protein_coding	alternative2	17	-1	57545505	5164
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234908	nonsense_mediated_decay		17	-1	57545505	4794
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234962	nonsense_mediated_decay		17	-1	57545505	4866
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234642	nonsense_mediated_decay		17	-1	57545505	4706
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234917	nonsense_mediated_decay		17	-1	57545505	4782
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234508	protein_coding	alternative2	17	-1	57545505	4588
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234883	protein_coding	alternative2	17	-1	57545505	4660
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000112301	protein_coding	principal1	X	1	162901870	3099
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234476	protein_coding		17	-1	57545505	4432
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000112303	protein_coding	principal1	X	1	162901605	3289
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234401	protein_coding		17	-1	57545505	4360
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234852	protein_coding	alternative2	17	-1	57545505	4936
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000101095	protein_coding		X	1	162901238	1665
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000165781	protein_coding	principal2	17	-1	57545505	5092
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234679	retained_intron		17	-1	57545505	17332
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234037	retained_intron		17	-1	57545505	5394
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000033727	protein_coding	principal1	X	1	162901632	3353
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234578	protein_coding		17	-1	57545505	4968
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000148199	processed_transcript		X	1	162941555	199
ENSMUSG00000090655	protein_coding	Vmn2r120	ENSMUST00000234162	protein_coding		17	-1	57545505	4536
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000112302	protein_coding		X	1	162901769	3223
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000151424	processed_transcript		X	1	162901785	368
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000123089	processed_transcript		X	1	162901245	522
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000148949	processed_transcript		X	1	162901245	432
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000126956	processed_transcript		X	1	162929663	373
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000135094	processed_transcript		X	1	162941174	592
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000142927	processed_transcript		X	1	162902171	903
ENSMUSG00000031360	protein_coding	Ctps2	ENSMUST00000112300	protein_coding		X	1	162969105	741
ENSMUSG00000054693	protein_coding	Adam10	ENSMUST00000067880	protein_coding	principal1	9	1	70678997	4593
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000207889	protein_coding	principal2	6	-1	121081609	9204
ENSMUSG00000054693	protein_coding	Adam10	ENSMUST00000140205	nonsense_mediated_decay		9	1	70678997	2720
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000238957	protein_coding	alternative2	6	-1	121081609	9129
ENSMUSG00000054693	protein_coding	Adam10	ENSMUST00000144537	protein_coding		9	1	70679016	623
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000238920	protein_coding	alternative2	6	-1	121081609	9267
ENSMUSG00000054693	protein_coding	Adam10	ENSMUST00000145377	retained_intron		9	1	70776053	826
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000238968	protein_coding	alternative2	6	-1	121081609	9357
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000212333	protein_coding		6	-1	120982718	3419
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000151602	processed_transcript		6	-1	120958635	992
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000140854	retained_intron		6	-1	120935535	312
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000142924	processed_transcript		6	-1	120957723	731
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000150503	processed_transcript		6	-1	121003152	2810
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000204302	protein_coding		6	-1	121022249	4854
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000212208	protein_coding		6	-1	121024835	1382
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000203254	nonsense_mediated_decay		6	-1	121081588	2953
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000077159	protein_coding		6	-1	121081590	2875
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000205030	protein_coding		6	-1	121022264	673
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000203095	processed_transcript		6	-1	121022286	448
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000204994	retained_intron		6	-1	121110094	6930
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000204248	protein_coding		6	-1	121130999	2390
ENSMUSG00000032207	protein_coding	Lipc	ENSMUST00000034731	protein_coding	principal2	9	-1	70934808	1920
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000205020	retained_intron		6	-1	121025763	1235
ENSMUSG00000032207	protein_coding	Lipc	ENSMUST00000216798	protein_coding	alternative2	9	-1	70952226	1726
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000203188	processed_transcript		6	-1	121025408	342
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000204644	retained_intron		6	-1	121030760	1823
ENSMUSG00000032207	protein_coding	Lipc	ENSMUST00000214995	protein_coding		9	-1	70934613	376
ENSMUSG00000032207	protein_coding	Lipc	ENSMUST00000215814	processed_transcript		9	-1	70952221	351
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000207968	protein_coding		6	-1	121103535	551
ENSMUSG00000111631	processed_transcript	Gm32017	ENSMUST00000215190	processed_transcript		9	1	70930488	1723
ENSMUSG00000051586	protein_coding	Mical3	ENSMUST00000207993	protein_coding		6	-1	121104641	406
ENSMUSG00000096160	processed_pseudogene	Gm3436	ENSMUST00000179930	processed_pseudogene		9	1	70852576	840
ENSMUSG00000108232	antisense	Gm43916	ENSMUST00000205062	antisense		6	1	120951901	967
ENSMUSG00000083225	processed_pseudogene	Gm15215	ENSMUST00000117773	processed_pseudogene		X	-1	163208800	489
ENSMUSG00000082598	processed_pseudogene	Gm15212	ENSMUST00000122403	processed_pseudogene		X	1	163272912	466
ENSMUSG00000082970	processed_pseudogene	Gm15214	ENSMUST00000122155	processed_pseudogene		X	-1	163327369	470
ENSMUSG00000080778	processed_pseudogene	Gm7199	ENSMUST00000118327	processed_pseudogene		X	1	163477652	1485
ENSMUSG00000027641	protein_coding	Rbl1	ENSMUST00000029170	protein_coding	principal1	2	-1	157204512	4862
ENSMUSG00000031364	protein_coding	Grpr	ENSMUST00000033730	protein_coding	principal1	X	-1	163549677	2523
ENSMUSG00000027641	protein_coding	Rbl1	ENSMUST00000154721	retained_intron		2	-1	157204534	2715
ENSMUSG00000083695	protein_coding	Rnf138rt1	ENSMUST00000059320	protein_coding	principal1	X	-1	163761329	1191
ENSMUSG00000027641	protein_coding	Rbl1	ENSMUST00000124518	retained_intron		2	-1	157204526	2383
ENSMUSG00000027641	protein_coding	Rbl1	ENSMUST00000141296	retained_intron		2	-1	157192383	550
ENSMUSG00000081699	processed_pseudogene	Gm15213	ENSMUST00000122098	processed_pseudogene		X	-1	163778444	216
ENSMUSG00000084113	processed_pseudogene	Gm14277	ENSMUST00000121195	processed_pseudogene		2	1	157168820	360
ENSMUSG00000117223	unprocessed_pseudogene	Gm49842	ENSMUST00000233817	unprocessed_pseudogene		17	-1	57557965	700
ENSMUSG00000117082	processed_pseudogene	Gm18139	ENSMUST00000233731	processed_pseudogene		17	1	57741799	1273
ENSMUSG00000002881	protein_coding	Nab1	ENSMUST00000186764	protein_coding	alternative1	1	-1	52500300	3640
ENSMUSG00000117022	processed_pseudogene	Gm17920	ENSMUST00000233666	processed_pseudogene		17	1	57756163	860
ENSMUSG00000002881	protein_coding	Nab1	ENSMUST00000069792	protein_coding	principal2	1	-1	52500679	3874
ENSMUSG00000002881	protein_coding	Nab1	ENSMUST00000170269	protein_coding		1	-1	52490736	1371
ENSMUSG00000002881	protein_coding	Nab1	ENSMUST00000167732	retained_intron		1	-1	52467057	514
ENSMUSG00000002881	protein_coding	Nab1	ENSMUST00000168082	processed_transcript		1	-1	52500315	433
ENSMUSG00000085202	processed_pseudogene	Gm15620	ENSMUST00000122949	processed_pseudogene		13	-1	93727702	270
ENSMUSG00000087334	antisense	AW495222	ENSMUST00000149839	antisense		13	-1	93719175	868
ENSMUSG00000087334	antisense	AW495222	ENSMUST00000148316	antisense		13	-1	93719134	540
ENSMUSG00000104860	TEC	Gm42510	ENSMUST00000196470	TEC		3	-1	123687972	2258
ENSMUSG00000032204	protein_coding	Aqp9	ENSMUST00000074465	protein_coding	principal1	9	-1	71163289	2646
ENSMUSG00000032204	protein_coding	Aqp9	ENSMUST00000144618	nonsense_mediated_decay		9	-1	71163260	2765
ENSMUSG00000032204	protein_coding	Aqp9	ENSMUST00000113570	protein_coding	principal1	9	-1	71168657	1712
ENSMUSG00000032204	protein_coding	Aqp9	ENSMUST00000153050	processed_transcript		9	-1	71168682	422
ENSMUSG00000032204	protein_coding	Aqp9	ENSMUST00000133239	processed_transcript		9	-1	71167633	379
ENSMUSG00000032204	protein_coding	Aqp9	ENSMUST00000138364	processed_transcript		9	-1	71167849	472
ENSMUSG00000042102	protein_coding	Dmgdh	ENSMUST00000048001	protein_coding	principal1	13	1	93674433	2992
ENSMUSG00000032204	protein_coding	Aqp9	ENSMUST00000135892	processed_transcript		9	-1	71165222	428
ENSMUSG00000032204	protein_coding	Aqp9	ENSMUST00000139495	processed_transcript		9	-1	71167893	619
ENSMUSG00000042102	protein_coding	Dmgdh	ENSMUST00000126196	processed_transcript		13	1	93711539	545
ENSMUSG00000032204	protein_coding	Aqp9	ENSMUST00000136798	processed_transcript		9	-1	71168677	399
ENSMUSG00000032204	protein_coding	Aqp9	ENSMUST00000060917	protein_coding		9	-1	71162633	2643
ENSMUSG00000111429	antisense	Gm32511	ENSMUST00000214960	antisense		9	1	71163794	519
ENSMUSG00000111429	antisense	Gm32511	ENSMUST00000217021	antisense		9	1	71168776	2069
ENSMUSG00000111618	processed_pseudogene	Gm47268	ENSMUST00000213527	processed_pseudogene		9	1	71126842	703
ENSMUSG00000027977	protein_coding	Ndst3	ENSMUST00000137404	nonsense_mediated_decay		3	-1	123690853	5528
ENSMUSG00000027977	protein_coding	Ndst3	ENSMUST00000132112	protein_coding		3	-1	123619501	4460
ENSMUSG00000027977	protein_coding	Ndst3	ENSMUST00000154668	protein_coding	principal1	3	-1	123690853	5570
ENSMUSG00000031367	protein_coding	Ap1s2	ENSMUST00000069041	protein_coding	principal4	X	1	163909017	2226
ENSMUSG00000027977	protein_coding	Ndst3	ENSMUST00000124803	protein_coding		3	-1	123619450	1917
ENSMUSG00000031367	protein_coding	Ap1s2	ENSMUST00000033734	protein_coding	alternative1	X	1	163909142	1785
ENSMUSG00000027977	protein_coding	Ndst3	ENSMUST00000172537	protein_coding	principal1	3	-1	123690280	3152
ENSMUSG00000031367	protein_coding	Ap1s2	ENSMUST00000112294	protein_coding		X	1	163909145	3199
ENSMUSG00000027977	protein_coding	Ndst3	ENSMUST00000199046	retained_intron		3	-1	123672577	2003
ENSMUSG00000027977	protein_coding	Ndst3	ENSMUST00000199825	retained_intron		3	-1	123560129	3470
ENSMUSG00000027977	protein_coding	Ndst3	ENSMUST00000132896	processed_transcript		3	-1	123576516	372
ENSMUSG00000031367	protein_coding	Ap1s2	ENSMUST00000140845	protein_coding		X	1	163911401	1673
ENSMUSG00000027977	protein_coding	Ndst3	ENSMUST00000029602	protein_coding	principal1	3	-1	123672392	5335
ENSMUSG00000066705	protein_coding	Fxyd6	ENSMUST00000085939	protein_coding	principal2	9	1	45370185	1788
ENSMUSG00000066705	protein_coding	Fxyd6	ENSMUST00000217381	protein_coding	alternative1	9	1	45370185	1789
ENSMUSG00000066705	protein_coding	Fxyd6	ENSMUST00000215281	processed_transcript		9	1	45370442	2362
ENSMUSG00000116307	antisense	Gm49490	ENSMUST00000230340	antisense		15	1	78531109	475
ENSMUSG00000022440	protein_coding	C1qtnf6	ENSMUST00000023075	protein_coding	principal1	15	-1	78529625	2402
ENSMUSG00000022440	protein_coding	C1qtnf6	ENSMUST00000147093	processed_transcript		15	-1	78529625	2191
ENSMUSG00000022440	protein_coding	C1qtnf6	ENSMUST00000229185	protein_coding		15	-1	78529592	2201
ENSMUSG00000022440	protein_coding	C1qtnf6	ENSMUST00000137827	processed_transcript		15	-1	78529627	525
ENSMUSG00000022440	protein_coding	C1qtnf6	ENSMUST00000230943	protein_coding		15	-1	78531416	199
ENSMUSG00000031370	protein_coding	Zrsr2	ENSMUST00000112289	protein_coding	principal1	X	-1	163958589	2735
ENSMUSG00000031370	protein_coding	Zrsr2	ENSMUST00000132350	retained_intron		X	-1	163950216	770
ENSMUSG00000031370	protein_coding	Zrsr2	ENSMUST00000145962	retained_intron		X	-1	163943476	584
ENSMUSG00000031370	protein_coding	Zrsr2	ENSMUST00000124719	retained_intron		X	-1	163950458	712
ENSMUSG00000031370	protein_coding	Zrsr2	ENSMUST00000090840	protein_coding		X	-1	163958598	3867
ENSMUSG00000031370	protein_coding	Zrsr2	ENSMUST00000139166	processed_transcript		X	-1	163958162	504
ENSMUSG00000031370	protein_coding	Zrsr2	ENSMUST00000147928	protein_coding		X	-1	163958552	460
ENSMUSG00000031370	protein_coding	Zrsr2	ENSMUST00000127370	protein_coding		X	-1	163958661	382
ENSMUSG00000038048	protein_coding	Cntnap5c	ENSMUST00000076038	protein_coding	principal1	17	1	57769570	3931
ENSMUSG00000071052	processed_pseudogene	Rpl7a-ps5	ENSMUST00000095218	processed_pseudogene		17	-1	57839221	792
ENSMUSG00000062906	protein_coding	Hdac10	ENSMUST00000129398	processed_transcript		15	-1	89128653	2376
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000129073	retained_intron		2	-1	181135177	2758
ENSMUSG00000062906	protein_coding	Hdac10	ENSMUST00000082197	protein_coding	principal1	15	-1	89128700	2412
ENSMUSG00000062906	protein_coding	Hdac10	ENSMUST00000143465	retained_intron		15	-1	89128651	2650
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000144592	retained_intron		2	-1	181135177	2011
ENSMUSG00000074627	protein_coding	Mroh8	ENSMUST00000143663	protein_coding	principal1	2	-1	157279549	3460
ENSMUSG00000062906	protein_coding	Hdac10	ENSMUST00000128908	retained_intron		15	-1	89128661	2580
ENSMUSG00000062906	protein_coding	Hdac10	ENSMUST00000134111	retained_intron		15	-1	89128679	2895
ENSMUSG00000074627	protein_coding	Mroh8	ENSMUST00000141081	processed_transcript		2	-1	157223952	528
ENSMUSG00000062906	protein_coding	Hdac10	ENSMUST00000109347	protein_coding		15	-1	89128448	1824
ENSMUSG00000074627	protein_coding	Mroh8	ENSMUST00000146848	processed_transcript		2	-1	157279289	575
ENSMUSG00000062906	protein_coding	Hdac10	ENSMUST00000138245	processed_transcript		15	-1	89125685	911
ENSMUSG00000074627	protein_coding	Mroh8	ENSMUST00000147602	processed_transcript		2	-1	157258048	469
ENSMUSG00000062906	protein_coding	Hdac10	ENSMUST00000153195	processed_transcript		15	-1	89127490	916
ENSMUSG00000074627	protein_coding	Mroh8	ENSMUST00000150035	processed_transcript		2	-1	157279549	1701
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000139458	retained_intron		2	-1	181135177	1816
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000142463	processed_transcript		2	1	157279017	424
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000154164	processed_transcript		2	-1	181135177	1226
ENSMUSG00000031373	protein_coding	Car5b	ENSMUST00000033739	protein_coding	principal1	X	-1	164027997	3436
ENSMUSG00000031373	protein_coding	Car5b	ENSMUST00000126650	retained_intron		X	-1	164027981	3157
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000123336	retained_intron		2	-1	181135177	1686
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000129361	retained_intron		2	-1	181135177	2243
ENSMUSG00000016346	protein_coding	Kcnq2	ENSMUST00000140789	retained_intron		2	-1	181135243	5796
ENSMUSG00000013584	protein_coding	Aldh1a2	ENSMUST00000034723	protein_coding	principal1	9	1	71215789	2264
ENSMUSG00000111181	processed_pseudogene	Gm48124	ENSMUST00000214975	processed_pseudogene		9	-1	71279185	412
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000116380	protein_coding	principal1	2	1	157279059	2756
ENSMUSG00000040749	protein_coding	Siah1b	ENSMUST00000037928	protein_coding	principal1	X	-1	164076121	1783
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000029171	protein_coding		2	1	157279146	2621
ENSMUSG00000040749	protein_coding	Siah1b	ENSMUST00000071667	protein_coding	principal1	X	-1	164076150	1712
ENSMUSG00000040749	protein_coding	Siah1b	ENSMUST00000134272	protein_coding		X	-1	164076493	803
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000127252	processed_transcript		2	1	157279426	2314
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000150349	processed_transcript		2	1	157279569	670
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000156007	processed_transcript		2	1	157281943	565
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000126248	processed_transcript		2	1	157283583	1944
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000125311	processed_transcript		2	1	157294842	139
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000123639	processed_transcript		2	1	157314551	366
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000141934	retained_intron		2	1	157316177	934
ENSMUSG00000027642	protein_coding	Rpn2	ENSMUST00000149924	retained_intron		2	1	157319783	832
ENSMUSG00000015401	protein_coding	Cltrn	ENSMUST00000112280	protein_coding	principal1	X	1	164088830	1389
ENSMUSG00000015401	protein_coding	Cltrn	ENSMUST00000141818	protein_coding		X	1	164092189	374
ENSMUSG00000015401	protein_coding	Cltrn	ENSMUST00000015545	protein_coding	principal1	X	1	164090187	1262
ENSMUSG00000032199	protein_coding	Polr2m	ENSMUST00000034720	protein_coding	principal1	9	-1	71485935	2200
ENSMUSG00000032199	protein_coding	Polr2m	ENSMUST00000163972	protein_coding		9	-1	71484958	2138
ENSMUSG00000032199	protein_coding	Polr2m	ENSMUST00000169804	nonsense_mediated_decay		9	-1	71485910	720
ENSMUSG00000032199	protein_coding	Polr2m	ENSMUST00000233263	protein_coding		9	-1	71485905	255
ENSMUSG00000041361	protein_coding	Myzap	ENSMUST00000163708	retained_intron		9	-1	71592360	5503
ENSMUSG00000034485	protein_coding	Uaca	ENSMUST00000214354	protein_coding	alternative2	9	1	60794542	4417
ENSMUSG00000034485	protein_coding	Uaca	ENSMUST00000050183	protein_coding	principal2	9	1	60794548	4428
ENSMUSG00000034485	protein_coding	Uaca	ENSMUST00000217656	protein_coding		9	1	60794625	3824
ENSMUSG00000034485	protein_coding	Uaca	ENSMUST00000214997	retained_intron		9	1	60862414	4493
ENSMUSG00000034485	protein_coding	Uaca	ENSMUST00000216574	retained_intron		9	1	60866145	866
ENSMUSG00000052143	antisense	Gm9869	ENSMUST00000214999	antisense		9	-1	60838199	679
ENSMUSG00000052143	antisense	Gm9869	ENSMUST00000063858	antisense		9	-1	60838200	375
ENSMUSG00000041361	protein_coding	Myzap	ENSMUST00000093823	protein_coding	principal1	9	-1	71592360	2283
ENSMUSG00000041361	protein_coding	Myzap	ENSMUST00000169573	protein_coding		9	-1	71592265	1393
ENSMUSG00000041361	protein_coding	Myzap	ENSMUST00000171977	protein_coding		9	-1	71579885	340
ENSMUSG00000041361	protein_coding	Myzap	ENSMUST00000166112	protein_coding		9	-1	71592342	359
ENSMUSG00000031425	protein_coding	Plp1	ENSMUST00000033800	protein_coding	principal3	X	1	136822671	4699
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000041558	protein_coding	principal3	5	-1	110770527	10608
ENSMUSG00000031425	protein_coding	Plp1	ENSMUST00000113085	protein_coding	alternative1	X	1	136822790	2540
ENSMUSG00000031425	protein_coding	Plp1	ENSMUST00000125644	retained_intron		X	1	136831162	736
ENSMUSG00000031425	protein_coding	Plp1	ENSMUST00000144880	retained_intron		X	1	136833251	717
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000112436	protein_coding	alternative2	5	-1	110770717	10685
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000144581	processed_transcript		5	-1	110668188	371
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000122901	retained_intron		5	-1	110668807	826
ENSMUSG00000022220	protein_coding	Adcy4	ENSMUST00000170223	protein_coding	principal1	14	-1	55784042	3501
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000129884	retained_intron		5	-1	110692167	729
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000141986	retained_intron		5	-1	110699133	627
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000125325	protein_coding		5	-1	110707943	974
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000146458	protein_coding		5	-1	110770585	3673
ENSMUSG00000022220	protein_coding	Adcy4	ENSMUST00000002398	protein_coding	principal1	14	-1	55784063	3444
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000112433	protein_coding		5	-1	110770155	3399
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000146652	processed_transcript		5	-1	110770717	394
ENSMUSG00000022220	protein_coding	Adcy4	ENSMUST00000226361	retained_intron		14	-1	55783686	4270
ENSMUSG00000029505	protein_coding	Ep400	ENSMUST00000112435	protein_coding		5	-1	110770717	10420
ENSMUSG00000022220	protein_coding	Adcy4	ENSMUST00000226575	retained_intron		14	-1	55773089	819
ENSMUSG00000022220	protein_coding	Adcy4	ENSMUST00000228933	retained_intron		14	-1	55773888	459
ENSMUSG00000022220	protein_coding	Adcy4	ENSMUST00000227031	protein_coding		14	-1	55784095	256
ENSMUSG00000117281	processed_pseudogene	Gm49848	ENSMUST00000233462	processed_pseudogene		17	1	58462325	192
ENSMUSG00000080842	processed_pseudogene	Gm15400	ENSMUST00000118944	processed_pseudogene		3	1	123761327	601
ENSMUSG00000044933	protein_coding	Sstr3	ENSMUST00000053239	protein_coding	principal1	15	-1	78544685	4275
ENSMUSG00000044933	protein_coding	Sstr3	ENSMUST00000230400	protein_coding		15	-1	78543041	448
ENSMUSG00000117271	processed_pseudogene	Gm6149	ENSMUST00000232830	processed_pseudogene		17	-1	58579967	938
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000165777	protein_coding		15	1	81987835	797
ENSMUSG00000081939	processed_pseudogene	Gm15399	ENSMUST00000118055	processed_pseudogene		3	-1	123985104	724
ENSMUSG00000117188	processed_pseudogene	Gm49849	ENSMUST00000233242	processed_pseudogene		17	1	58583092	544
ENSMUSG00000104531	lincRNA	Gm43731	ENSMUST00000196150	lincRNA		3	1	124246237	666
ENSMUSG00000106238	processed_pseudogene	Gm42824	ENSMUST00000199361	processed_pseudogene		3	-1	124304430	247
ENSMUSG00000090474	transcribed_processed_pseudogene	Gm9372	ENSMUST00000168454	transcribed_processed_pseudogene		3	1	124292076	430
ENSMUSG00000046952	processed_pseudogene	Gm5815	ENSMUST00000050706	processed_pseudogene		17	1	58593614	1227
ENSMUSG00000117298	processed_pseudogene	Gm9284	ENSMUST00000232925	processed_pseudogene		17	-1	58803626	574
ENSMUSG00000117100	lincRNA	A330072L02Rik	ENSMUST00000232926	lincRNA		17	-1	58836041	1327
ENSMUSG00000042408	protein_coding	Zmym6	ENSMUST00000046751	protein_coding	principal1	4	1	127077383	4210
ENSMUSG00000042408	protein_coding	Zmym6	ENSMUST00000094713	protein_coding		4	1	127077397	3922
ENSMUSG00000042408	protein_coding	Zmym6	ENSMUST00000151461	processed_transcript		4	1	127077442	3115
ENSMUSG00000024227	protein_coding	Pdzph1	ENSMUST00000177108	retained_intron		17	-1	58884133	735
ENSMUSG00000042408	protein_coding	Zmym6	ENSMUST00000129926	processed_transcript		4	1	127078291	404
ENSMUSG00000042408	protein_coding	Zmym6	ENSMUST00000146616	processed_transcript		4	1	127086589	677
ENSMUSG00000042408	protein_coding	Zmym6	ENSMUST00000125160	processed_transcript		4	1	127104034	2637
ENSMUSG00000070737	protein_coding	Tmem35b	ENSMUST00000106097	protein_coding	alternative2	4	1	127123691	1762
ENSMUSG00000070737	protein_coding	Tmem35b	ENSMUST00000094712	protein_coding	principal2	4	1	127126046	1120
ENSMUSG00000097833	processed_pseudogene	Gm5976	ENSMUST00000180794	processed_pseudogene		1	-1	52504229	996
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000100399	protein_coding	principal1	15	1	82015519	3296
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000069530	protein_coding	principal1	15	1	82016369	2114
ENSMUSG00000024227	protein_coding	Pdzph1	ENSMUST00000025064	protein_coding	principal1	17	-1	58991375	4174
ENSMUSG00000024227	protein_coding	Pdzph1	ENSMUST00000177360	protein_coding		17	-1	58893495	950
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000168581	protein_coding		15	1	82016461	471
ENSMUSG00000005699	protein_coding	Pard6a	ENSMUST00000212634	processed_transcript		8	1	105701148	678
ENSMUSG00000005699	protein_coding	Pard6a	ENSMUST00000212972	retained_intron		8	1	105701151	310
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000170630	processed_transcript		15	1	82016464	677
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000164779	protein_coding		15	1	82016515	809
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000164975	retained_intron		15	1	82022283	425
ENSMUSG00000044528	protein_coding	Tram1l1	ENSMUST00000058994	protein_coding	principal1	3	1	124320855	3889
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000170907	retained_intron		15	1	82022976	802
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000166311	retained_intron		15	1	82025389	686
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000164920	processed_transcript		15	1	82028064	387
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000230729	protein_coding		15	1	82028132	1062
ENSMUSG00000096544	processed_pseudogene	Gm4617	ENSMUST00000178993	processed_pseudogene		3	1	124385667	331
ENSMUSG00000022471	protein_coding	Xrcc6	ENSMUST00000164775	retained_intron		15	1	82029060	529
ENSMUSG00000005699	protein_coding	Pard6a	ENSMUST00000098444	protein_coding		8	1	105701154	1273
ENSMUSG00000068226	processed_pseudogene	Gm6723	ENSMUST00000180449	processed_pseudogene		15	-1	78554848	441
ENSMUSG00000005699	protein_coding	Pard6a	ENSMUST00000212352	protein_coding		8	1	105701187	1234
ENSMUSG00000022472	protein_coding	Desi1	ENSMUST00000146628	nonsense_mediated_decay		15	-1	82016153	2854
ENSMUSG00000106150	TEC	4921527H02Rik	ENSMUST00000196005	TEC		3	-1	124399758	1673
ENSMUSG00000005699	protein_coding	Pard6a	ENSMUST00000211888	protein_coding		8	1	105701647	1179
ENSMUSG00000005699	protein_coding	Pard6a	ENSMUST00000212430	protein_coding	alternative1	8	1	105701649	1261
ENSMUSG00000005699	protein_coding	Pard6a	ENSMUST00000093195	protein_coding	principal3	8	1	105701647	1265
ENSMUSG00000101501	processed_pseudogene	Rps27a-ps1	ENSMUST00000191424	processed_pseudogene		1	1	52522239	463
ENSMUSG00000022472	protein_coding	Desi1	ENSMUST00000152227	protein_coding	principal1	15	-1	82016163	2934
ENSMUSG00000015405	protein_coding	Ace2	ENSMUST00000112271	protein_coding	principal1	X	1	164139332	3578
ENSMUSG00000022472	protein_coding	Desi1	ENSMUST00000135988	nonsense_mediated_decay		15	-1	82016225	1855
ENSMUSG00000099878	lincRNA	Gm28178	ENSMUST00000188544	lincRNA		1	-1	52580291	2943
ENSMUSG00000022472	protein_coding	Desi1	ENSMUST00000129039	processed_transcript		15	-1	82033862	881
ENSMUSG00000015405	protein_coding	Ace2	ENSMUST00000073973	protein_coding	principal1	X	1	164140478	3422
ENSMUSG00000100120	lincRNA	Gm553	ENSMUST00000189527	lincRNA		1	1	52522902	701
ENSMUSG00000022472	protein_coding	Desi1	ENSMUST00000023110	nonsense_mediated_decay		15	-1	82016011	748
ENSMUSG00000022472	protein_coding	Desi1	ENSMUST00000089187	nonsense_mediated_decay		15	-1	82016037	518
ENSMUSG00000015405	protein_coding	Ace2	ENSMUST00000131543	protein_coding		X	1	164162178	1714
ENSMUSG00000111815	processed_pseudogene	Gm6018	ENSMUST00000216090	processed_pseudogene		9	-1	71600140	1306
ENSMUSG00000022610	protein_coding	Mapk12	ENSMUST00000230352	retained_intron		15	-1	89133282	1423
ENSMUSG00000042082	protein_coding	Arsb	ENSMUST00000091403	protein_coding	principal1	13	1	93771630	4038
ENSMUSG00000022610	protein_coding	Mapk12	ENSMUST00000088827	protein_coding	principal1	15	-1	89140621	1808
ENSMUSG00000042082	protein_coding	Arsb	ENSMUST00000220652	processed_transcript		13	1	93771696	3226
ENSMUSG00000113647	bidirectional_promoter_lncRNA	Gm47210	ENSMUST00000221692	bidirectional_promoter_lncRNA		13	-1	93772194	1245
ENSMUSG00000022610	protein_coding	Mapk12	ENSMUST00000230266	retained_intron		15	-1	89140652	1928
ENSMUSG00000022610	protein_coding	Mapk12	ENSMUST00000230509	processed_transcript		15	-1	89135618	930
ENSMUSG00000022610	protein_coding	Mapk12	ENSMUST00000231014	processed_transcript		15	-1	89137444	793
ENSMUSG00000022610	protein_coding	Mapk12	ENSMUST00000231056	processed_transcript		15	-1	89137614	445
ENSMUSG00000022610	protein_coding	Mapk12	ENSMUST00000229193	retained_intron		15	-1	89140703	1832
ENSMUSG00000061877	protein_coding	BC048679	ENSMUST00000073406	protein_coding	principal3	7	-1	81498281	522
ENSMUSG00000061877	protein_coding	BC048679	ENSMUST00000144156	protein_coding	alternative2	7	-1	81498281	640
ENSMUSG00000061877	protein_coding	BC048679	ENSMUST00000207871	protein_coding	alternative2	7	-1	81498271	567
ENSMUSG00000100007	processed_pseudogene	Gm5527	ENSMUST00000179821	processed_pseudogene		1	1	52584518	642
ENSMUSG00000082220	processed_pseudogene	Gm12943	ENSMUST00000119616	processed_pseudogene		4	-1	127141488	210
ENSMUSG00000022019	protein_coding	Tdrd3	ENSMUST00000169504	protein_coding		14	1	87416639	5280
ENSMUSG00000104453	TEC	Gm37829	ENSMUST00000193864	TEC		7	-1	81532521	2213
ENSMUSG00000022019	protein_coding	Tdrd3	ENSMUST00000168275	protein_coding	principal1	14	1	87416639	2657
ENSMUSG00000022019	protein_coding	Tdrd3	ENSMUST00000170865	protein_coding		14	1	87416666	2530
ENSMUSG00000022019	protein_coding	Tdrd3	ENSMUST00000170712	protein_coding		14	1	87457081	636
ENSMUSG00000022019	protein_coding	Tdrd3	ENSMUST00000163714	processed_transcript		14	1	87471907	849
ENSMUSG00000022019	protein_coding	Tdrd3	ENSMUST00000227304	processed_transcript		14	1	87539099	669
ENSMUSG00000097277	lincRNA	2900076A07Rik	ENSMUST00000181903	lincRNA		7	1	81523550	679
ENSMUSG00000097277	lincRNA	2900076A07Rik	ENSMUST00000180385	lincRNA		7	1	81523563	914
ENSMUSG00000115564	TEC	Gm49199	ENSMUST00000226140	TEC		14	1	87428350	966
ENSMUSG00000097277	lincRNA	2900076A07Rik	ENSMUST00000181164	lincRNA		7	1	81523571	399
ENSMUSG00000115184	TEC	Gm49197	ENSMUST00000226795	TEC		14	1	87492953	2201
ENSMUSG00000115484	processed_pseudogene	Gm33121	ENSMUST00000227005	processed_pseudogene		14	-1	87441690	483
ENSMUSG00000097277	lincRNA	2900076A07Rik	ENSMUST00000180879	lincRNA		7	1	81523571	725
ENSMUSG00000097277	lincRNA	2900076A07Rik	ENSMUST00000181264	lincRNA		7	1	81523618	344
ENSMUSG00000097277	lincRNA	2900076A07Rik	ENSMUST00000180705	lincRNA		7	1	81528400	706
ENSMUSG00000111444	lincRNA	Gm47923	ENSMUST00000216374	lincRNA		9	1	60919223	2201
ENSMUSG00000097277	lincRNA	2900076A07Rik	ENSMUST00000180983	lincRNA		7	1	81528777	598
ENSMUSG00000097277	lincRNA	2900076A07Rik	ENSMUST00000181492	lincRNA		7	1	81528792	720
ENSMUSG00000111290	lincRNA	Gm5122	ENSMUST00000215132	lincRNA		9	1	61013481	712
ENSMUSG00000111290	lincRNA	Gm5122	ENSMUST00000216854	lincRNA		9	1	61017069	1637
ENSMUSG00000031377	protein_coding	Bmx	ENSMUST00000112265	protein_coding	principal2	X	-1	164258193	3005
ENSMUSG00000111180	lincRNA	Gm39348	ENSMUST00000217239	lincRNA		9	-1	61055669	375
ENSMUSG00000111180	lincRNA	Gm39348	ENSMUST00000216861	lincRNA		9	-1	61055819	640
ENSMUSG00000031377	protein_coding	Bmx	ENSMUST00000112263	protein_coding	alternative2	X	-1	164250368	2433
ENSMUSG00000111147	lincRNA	Gm33699	ENSMUST00000216170	lincRNA		9	1	61032212	3468
ENSMUSG00000013155	protein_coding	Enkd1	ENSMUST00000212162	retained_intron		8	-1	105708025	3354
ENSMUSG00000013155	protein_coding	Enkd1	ENSMUST00000212716	retained_intron		8	-1	105708145	1568
ENSMUSG00000043463	protein_coding	Rab9b	ENSMUST00000058814	protein_coding	principal1	X	-1	136868755	3980
ENSMUSG00000013155	protein_coding	Enkd1	ENSMUST00000212061	nonsense_mediated_decay		8	-1	105708210	1673
ENSMUSG00000019087	protein_coding	Atp6ap1	ENSMUST00000019231	protein_coding	principal1	X	1	74297097	2189
ENSMUSG00000013155	protein_coding	Enkd1	ENSMUST00000013299	protein_coding	principal1	8	-1	105707933	1275
ENSMUSG00000019087	protein_coding	Atp6ap1	ENSMUST00000147900	protein_coding		X	1	74297143	709
ENSMUSG00000111354	lincRNA	Gm33914	ENSMUST00000214108	lincRNA		9	-1	61127031	2150
ENSMUSG00000013158	protein_coding	4933405L10Rik	ENSMUST00000212144	processed_transcript		8	1	105707655	575
ENSMUSG00000019087	protein_coding	Atp6ap1	ENSMUST00000147275	protein_coding		X	1	74297162	833
ENSMUSG00000111807	lincRNA	4933433G08Rik	ENSMUST00000217392	lincRNA		9	-1	61105385	1845
ENSMUSG00000019087	protein_coding	Atp6ap1	ENSMUST00000114171	protein_coding		X	1	74297163	2157
ENSMUSG00000111169	lincRNA	Gm34004	ENSMUST00000215460	lincRNA		9	1	61081951	2837
ENSMUSG00000111169	lincRNA	Gm34004	ENSMUST00000215586	lincRNA		9	1	61110386	826
ENSMUSG00000019087	protein_coding	Atp6ap1	ENSMUST00000135914	retained_intron		X	1	74297177	1128
ENSMUSG00000013158	protein_coding	4933405L10Rik	ENSMUST00000013302	protein_coding	principal2	8	1	105708291	1214
ENSMUSG00000019087	protein_coding	Atp6ap1	ENSMUST00000124797	nonsense_mediated_decay		X	1	74297233	745
ENSMUSG00000082563	processed_pseudogene	Gm15026	ENSMUST00000119219	processed_pseudogene		X	1	136890258	458
ENSMUSG00000013158	protein_coding	4933405L10Rik	ENSMUST00000211852	protein_coding	alternative2	8	1	105708303	1097
ENSMUSG00000019087	protein_coding	Atp6ap1	ENSMUST00000136056	nonsense_mediated_decay		X	1	74297262	799
ENSMUSG00000115608	processed_pseudogene	Gm48922	ENSMUST00000228615	processed_pseudogene		14	-1	87637470	179
ENSMUSG00000019087	protein_coding	Atp6ap1	ENSMUST00000144075	processed_transcript		X	1	74301924	349
ENSMUSG00000113791	lincRNA	Gm47216	ENSMUST00000221440	lincRNA		13	-1	93991768	381
ENSMUSG00000019087	protein_coding	Atp6ap1	ENSMUST00000144506	retained_intron		X	1	74302553	752
ENSMUSG00000080953	processed_pseudogene	Gm15025	ENSMUST00000118434	processed_pseudogene		X	1	136920241	418
ENSMUSG00000114174	processed_pseudogene	Cycs-ps3	ENSMUST00000223240	processed_pseudogene		13	1	94053843	321
ENSMUSG00000019087	protein_coding	Atp6ap1	ENSMUST00000154630	protein_coding		X	1	74303489	467
ENSMUSG00000115452	transcribed_processed_pseudogene	Gm18812	ENSMUST00000226744	transcribed_processed_pseudogene		14	-1	87991072	844
ENSMUSG00000115452	transcribed_processed_pseudogene	Gm18812	ENSMUST00000226882	processed_transcript		14	-1	87990866	450
ENSMUSG00000048155	protein_coding	H2bfm	ENSMUST00000059808	protein_coding	principal1	X	1	136927325	1052
ENSMUSG00000110998	lincRNA	I730028E13Rik	ENSMUST00000216012	lincRNA		9	1	61138515	1959
ENSMUSG00000115527	transcribed_processed_pseudogene	Gm4355	ENSMUST00000228314	processed_transcript		14	-1	88097415	544
ENSMUSG00000115527	transcribed_processed_pseudogene	Gm4355	ENSMUST00000226632	transcribed_processed_pseudogene		14	-1	88098037	1231
ENSMUSG00000111449	lincRNA	Gm34105	ENSMUST00000214812	lincRNA		9	1	61206679	571
ENSMUSG00000062611	processed_pseudogene	Rps3a2	ENSMUST00000074245	processed_pseudogene		14	-1	88123808	792
ENSMUSG00000081295	processed_pseudogene	Gm6275	ENSMUST00000118971	processed_pseudogene		X	1	136929786	1122
ENSMUSG00000115479	lincRNA	Gm33203	ENSMUST00000227521	lincRNA		14	-1	88337544	699
ENSMUSG00000115479	lincRNA	Gm33203	ENSMUST00000226380	lincRNA		14	-1	88337544	246
ENSMUSG00000024228	protein_coding	Nudt12	ENSMUST00000025065	protein_coding	principal1	17	-1	59013372	4113
ENSMUSG00000024228	protein_coding	Nudt12	ENSMUST00000174108	retained_intron		17	-1	59003707	2560
ENSMUSG00000024228	protein_coding	Nudt12	ENSMUST00000174122	protein_coding		17	-1	59013268	1244
ENSMUSG00000111658	lincRNA	B930092H01Rik	ENSMUST00000213377	lincRNA		9	-1	61293809	2678
ENSMUSG00000032232	protein_coding	Cgnl1	ENSMUST00000121322	protein_coding		9	-1	71771602	6541
ENSMUSG00000086594	antisense	Nudt12os	ENSMUST00000145848	antisense		17	1	58996251	939
ENSMUSG00000032232	protein_coding	Cgnl1	ENSMUST00000152224	retained_intron		9	-1	71631109	946
ENSMUSG00000086594	antisense	Nudt12os	ENSMUST00000152750	antisense		17	1	58996275	849
ENSMUSG00000098095	processed_pseudogene	Gm9274	ENSMUST00000182505	processed_pseudogene		14	-1	88350355	984
ENSMUSG00000086594	antisense	Nudt12os	ENSMUST00000167453	antisense		17	1	59017314	366
ENSMUSG00000032232	protein_coding	Cgnl1	ENSMUST00000122065	protein_coding	principal1	9	-1	71771560	4487
ENSMUSG00000032232	protein_coding	Cgnl1	ENSMUST00000136044	retained_intron		9	-1	71631330	771
ENSMUSG00000074256	lincRNA	Gm10655	ENSMUST00000187131	lincRNA		9	-1	61371627	750
ENSMUSG00000032232	protein_coding	Cgnl1	ENSMUST00000146567	processed_transcript		9	-1	71648350	416
ENSMUSG00000032232	protein_coding	Cgnl1	ENSMUST00000072899	protein_coding	principal1	9	-1	71771602	6754
ENSMUSG00000074256	lincRNA	Gm10655	ENSMUST00000098658	lincRNA		9	-1	61372193	1397
ENSMUSG00000043015	protein_coding	Nemp2	ENSMUST00000165859	protein_coding	principal1	1	1	52630703	3396
ENSMUSG00000115533	processed_pseudogene	Gm48929	ENSMUST00000228887	processed_pseudogene		14	-1	88355497	494
ENSMUSG00000115202	processed_pseudogene	Gm9275	ENSMUST00000228811	processed_pseudogene		14	1	88395940	775
ENSMUSG00000115114	transcribed_processed_pseudogene	Gm48930	ENSMUST00000226327	processed_transcript		14	-1	88416025	636
ENSMUSG00000115114	transcribed_processed_pseudogene	Gm48930	ENSMUST00000227261	transcribed_processed_pseudogene		14	-1	88415580	150
ENSMUSG00000043015	protein_coding	Nemp2	ENSMUST00000188507	nonsense_mediated_decay		1	1	52630737	3247
ENSMUSG00000043015	protein_coding	Nemp2	ENSMUST00000185483	nonsense_mediated_decay		1	1	52630747	2023
ENSMUSG00000043015	protein_coding	Nemp2	ENSMUST00000190108	retained_intron		1	1	52630752	3507
ENSMUSG00000043015	protein_coding	Nemp2	ENSMUST00000185790	nonsense_mediated_decay		1	1	52630797	1571
ENSMUSG00000043015	protein_coding	Nemp2	ENSMUST00000186903	retained_intron		1	1	52641516	4338
ENSMUSG00000043015	protein_coding	Nemp2	ENSMUST00000190452	processed_transcript		1	1	52641984	1618
ENSMUSG00000043015	protein_coding	Nemp2	ENSMUST00000191076	retained_intron		1	1	52645181	805
ENSMUSG00000027973	protein_coding	1700006A11Rik	ENSMUST00000029598	protein_coding	principal1	3	-1	124426040	2161
ENSMUSG00000072955	protein_coding	Tmsb15l	ENSMUST00000127404	protein_coding	principal1	X	-1	136976869	816
ENSMUSG00000027973	protein_coding	1700006A11Rik	ENSMUST00000198630	nonsense_mediated_decay		3	-1	124425991	1698
ENSMUSG00000106413	antisense	Gm42823	ENSMUST00000197975	antisense		3	1	124420429	256
ENSMUSG00000089996	protein_coding	Tmsb15b2	ENSMUST00000069803	protein_coding		X	-1	136958025	450
ENSMUSG00000117184	processed_pseudogene	Gm49851	ENSMUST00000233412	processed_pseudogene		17	1	59599141	496
ENSMUSG00000031379	protein_coding	Pir	ENSMUST00000145412	protein_coding		X	1	164269371	898
ENSMUSG00000089996	protein_coding	Tmsb15b2	ENSMUST00000180194	protein_coding	principal1	X	-1	136975497	243
ENSMUSG00000117178	processed_pseudogene	Gm49852	ENSMUST00000233632	processed_pseudogene		17	1	59656595	466
ENSMUSG00000031379	protein_coding	Pir	ENSMUST00000033749	protein_coding	principal1	X	1	164269431	1599
ENSMUSG00000117191	lincRNA	Gm49853	ENSMUST00000233598	lincRNA		17	1	59855217	669
ENSMUSG00000031379	protein_coding	Pir	ENSMUST00000127685	retained_intron		X	1	164269511	439
ENSMUSG00000089768	protein_coding	Tmsb15b1	ENSMUST00000113071	protein_coding	principal1	X	-1	136976874	439
ENSMUSG00000031379	protein_coding	Pir	ENSMUST00000129296	retained_intron		X	1	164269547	2915
ENSMUSG00000031379	protein_coding	Pir	ENSMUST00000123343	processed_transcript		X	1	164269573	2228
ENSMUSG00000050505	protein_coding	Pcdh20	ENSMUST00000061628	protein_coding	principal1	14	-1	88471396	5241
ENSMUSG00000050505	protein_coding	Pcdh20	ENSMUST00000192557	protein_coding	principal1	14	-1	88471346	3362
ENSMUSG00000115623	lincRNA	Gm41225	ENSMUST00000227074	lincRNA		14	1	88636033	772
ENSMUSG00000053137	protein_coding	Mapk11	ENSMUST00000230734	retained_intron		15	-1	89149494	2615
ENSMUSG00000102164	TEC	Gm36946	ENSMUST00000192706	TEC		14	1	89351025	435
ENSMUSG00000115392	processed_pseudogene	Gm17882	ENSMUST00000226292	processed_pseudogene		14	-1	89371582	299
ENSMUSG00000053137	protein_coding	Mapk11	ENSMUST00000088823	protein_coding	principal1	15	-1	89149628	2461
ENSMUSG00000053137	protein_coding	Mapk11	ENSMUST00000230634	processed_transcript		15	-1	89147177	749
ENSMUSG00000053137	protein_coding	Mapk11	ENSMUST00000228967	retained_intron		15	-1	89146786	534
ENSMUSG00000099220	processed_pseudogene	Gm27220	ENSMUST00000183453	processed_pseudogene		9	-1	71827537	262
ENSMUSG00000104467	TEC	Gm37660	ENSMUST00000192754	TEC		9	-1	71841736	1732
ENSMUSG00000062093	transcribed_processed_pseudogene	Gm10110	ENSMUST00000228705	processed_transcript		14	-1	89899447	3220
ENSMUSG00000062093	transcribed_processed_pseudogene	Gm10110	ENSMUST00000081204	transcribed_processed_pseudogene		14	-1	89898466	1891
ENSMUSG00000115313	lincRNA	Gm48941	ENSMUST00000228325	lincRNA		14	-1	90085892	429
ENSMUSG00000115001	lincRNA	4930474H20Rik	ENSMUST00000227263	lincRNA		14	1	90126891	1479
ENSMUSG00000031380	protein_coding	Vegfd	ENSMUST00000033751	protein_coding	principal1	X	1	164373378	2049
ENSMUSG00000115292	lincRNA	Gm33246	ENSMUST00000226296	lincRNA		14	-1	90691445	320
ENSMUSG00000031380	protein_coding	Vegfd	ENSMUST00000124851	retained_intron		X	1	164391243	918
ENSMUSG00000115565	processed_pseudogene	Gm18082	ENSMUST00000226394	processed_pseudogene		14	1	90719554	775
ENSMUSG00000115225	processed_pseudogene	Gm7272	ENSMUST00000226887	processed_pseudogene		14	-1	91199878	440
ENSMUSG00000115368	lincRNA	Gm48942	ENSMUST00000227213	lincRNA		14	-1	91647839	842
ENSMUSG00000022221	protein_coding	Ripk3	ENSMUST00000022830	protein_coding	principal1	14	-1	55788865	1892
ENSMUSG00000115171	unprocessed_pseudogene	Gm48943	ENSMUST00000227750	unprocessed_pseudogene		14	1	91676448	365
ENSMUSG00000022221	protein_coding	Ripk3	ENSMUST00000228077	retained_intron		14	-1	55785983	478
ENSMUSG00000115308	processed_pseudogene	Gm48944	ENSMUST00000228682	processed_pseudogene		14	1	92233505	270
ENSMUSG00000103410	TEC	Gm37341	ENSMUST00000194680	TEC		14	1	92496628	371
ENSMUSG00000115662	processed_pseudogene	Gm7232	ENSMUST00000227477	processed_pseudogene		14	-1	92604397	1940
ENSMUSG00000022221	protein_coding	Ripk3	ENSMUST00000178399	protein_coding		14	-1	55788857	1865
ENSMUSG00000022221	protein_coding	Ripk3	ENSMUST00000228476	protein_coding		14	-1	55786352	482
ENSMUSG00000022221	protein_coding	Ripk3	ENSMUST00000228175	retained_intron		14	-1	55786913	383
ENSMUSG00000022221	protein_coding	Ripk3	ENSMUST00000227072	processed_transcript		14	-1	55788119	443
ENSMUSG00000022221	protein_coding	Ripk3	ENSMUST00000228326	protein_coding		14	-1	55788392	658
ENSMUSG00000022221	protein_coding	Ripk3	ENSMUST00000226203	processed_transcript		14	-1	55788788	360
ENSMUSG00000022221	protein_coding	Ripk3	ENSMUST00000168716	protein_coding		14	-1	55788857	1964
ENSMUSG00000101606	lincRNA	Gm29051	ENSMUST00000190184	lincRNA		17	-1	60130875	369
ENSMUSG00000117112	processed_pseudogene	Gm4512	ENSMUST00000232928	processed_pseudogene		17	1	60490542	512
ENSMUSG00000039174	protein_coding	1700003H04Rik	ENSMUST00000180162	protein_coding	principal5	3	-1	124581091	1086
ENSMUSG00000039174	protein_coding	1700003H04Rik	ENSMUST00000178485	protein_coding	alternative2	3	-1	124581092	761
ENSMUSG00000031381	protein_coding	Piga	ENSMUST00000208741	protein_coding		X	1	164419787	854
ENSMUSG00000039174	protein_coding	1700003H04Rik	ENSMUST00000180033	nonsense_mediated_decay		3	-1	124581101	685
ENSMUSG00000039174	protein_coding	1700003H04Rik	ENSMUST00000177772	protein_coding		3	-1	124578501	197
ENSMUSG00000039174	protein_coding	1700003H04Rik	ENSMUST00000178953	nonsense_mediated_decay		3	-1	124581094	609
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000113069	protein_coding		X	-1	137038300	3189
ENSMUSG00000039174	protein_coding	1700003H04Rik	ENSMUST00000047110	protein_coding	alternative2	3	-1	124581091	1040
ENSMUSG00000031381	protein_coding	Piga	ENSMUST00000112257	nonsense_mediated_decay		X	1	164419787	3212
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000145842	processed_transcript		X	-1	137038302	3440
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000123516	processed_transcript		X	-1	137038272	1740
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000125747	processed_transcript		X	-1	137038032	1737
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000154484	retained_intron		X	-1	137030079	4094
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000132171	retained_intron		X	-1	137038302	843
ENSMUSG00000031381	protein_coding	Piga	ENSMUST00000033754	protein_coding	principal1	X	1	164419787	3594
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000148253	processed_transcript		X	-1	137038299	336
ENSMUSG00000031381	protein_coding	Piga	ENSMUST00000151911	nonsense_mediated_decay		X	1	164419787	3903
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000140615	processed_transcript		X	-1	137038008	218
ENSMUSG00000031381	protein_coding	Piga	ENSMUST00000208697	protein_coding		X	1	164419798	947
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000125864	processed_transcript		X	-1	137038024	343
ENSMUSG00000031381	protein_coding	Piga	ENSMUST00000208261	protein_coding		X	1	164419807	831
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000136300	processed_transcript		X	-1	137017758	502
ENSMUSG00000031381	protein_coding	Piga	ENSMUST00000112255	protein_coding	principal1	X	1	164419909	3597
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000056674	protein_coding		X	-1	136993057	820
ENSMUSG00000031381	protein_coding	Piga	ENSMUST00000133813	protein_coding		X	1	164422584	1086
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000129807	protein_coding		X	-1	136993089	770
ENSMUSG00000031381	protein_coding	Piga	ENSMUST00000155849	retained_intron		X	1	164425510	3321
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000171738	protein_coding	principal1	X	-1	136993032	2567
ENSMUSG00000044348	protein_coding	Slc25a53	ENSMUST00000113070	protein_coding		X	-1	137038278	3140
ENSMUSG00000031428	protein_coding	Zcchc18	ENSMUST00000113067	protein_coding	principal1	X	1	136993155	2259
ENSMUSG00000031428	protein_coding	Zcchc18	ENSMUST00000101227	protein_coding	principal1	X	1	136993159	2045
ENSMUSG00000031428	protein_coding	Zcchc18	ENSMUST00000033804	protein_coding	principal1	X	1	136993298	4733
ENSMUSG00000083445	transcribed_processed_pseudogene	Gm15038	ENSMUST00000122144	transcribed_processed_pseudogene		X	1	136998042	296
ENSMUSG00000036606	protein_coding	Plxnb2	ENSMUST00000143014	processed_transcript		15	-1	89156572	834
ENSMUSG00000115660	processed_pseudogene	Gm48962	ENSMUST00000226950	processed_pseudogene		14	1	92674098	220
ENSMUSG00000115720	lincRNA	4930433E05Rik	ENSMUST00000226822	lincRNA		14	-1	92866566	285
ENSMUSG00000115444	processed_pseudogene	Gm48963	ENSMUST00000226166	processed_pseudogene		14	-1	92892702	175
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000214680	processed_transcript		9	1	45399669	745
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000111773	protein_coding	alternative2	9	-1	117252463	7908
ENSMUSG00000036606	protein_coding	Plxnb2	ENSMUST00000109331	protein_coding	principal1	15	-1	89180788	6497
ENSMUSG00000036606	protein_coding	Plxnb2	ENSMUST00000229966	retained_intron		15	-1	89156919	860
ENSMUSG00000036606	protein_coding	Plxnb2	ENSMUST00000151418	retained_intron		15	-1	89157244	732
ENSMUSG00000036606	protein_coding	Plxnb2	ENSMUST00000230393	retained_intron		15	-1	89158451	825
ENSMUSG00000036606	protein_coding	Plxnb2	ENSMUST00000139372	retained_intron		15	-1	89161547	426
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000068962	protein_coding	principal3	9	-1	117252479	3320
ENSMUSG00000036606	protein_coding	Plxnb2	ENSMUST00000131062	retained_intron		15	-1	89165797	605
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000216289	protein_coding		9	1	45399709	668
ENSMUSG00000036606	protein_coding	Plxnb2	ENSMUST00000060808	protein_coding	principal1	15	-1	89170688	6394
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000173429	protein_coding		9	-1	116822806	1631
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000213850	protein_coding		9	1	45402123	518
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000214257	protein_coding		9	1	45402656	684
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000174868	protein_coding	alternative2	9	-1	117252126	2164
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000164018	protein_coding	alternative2	9	-1	117629913	2126
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000239475	protein_coding	alternative2	9	-1	117872681	2297
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000041005	protein_coding	principal1	9	1	45403138	632
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000111772	protein_coding	alternative2	9	-1	117252117	2234
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000214466	nonsense_mediated_decay		9	1	45403214	1694
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000216840	processed_transcript		9	1	45403976	690
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000044901	protein_coding	alternative2	9	-1	117252483	1983
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000213158	processed_transcript		9	1	45405925	711
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000172469	protein_coding		9	-1	116822819	585
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000214017	processed_transcript		9	1	45405955	699
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000213282	processed_transcript		9	1	45405968	630
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000214654	processed_transcript		9	1	45406105	399
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000214245	retained_intron		9	1	45406132	514
ENSMUSG00000059412	protein_coding	Fxyd2	ENSMUST00000217549	processed_transcript		9	1	45407172	258
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000069095	retained_intron		9	-1	117252482	2027
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000172564	protein_coding		9	-1	117251801	619
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000174276	processed_transcript		9	-1	117252479	1438
ENSMUSG00000117134	processed_pseudogene	Gm18521	ENSMUST00000233542	processed_pseudogene		17	-1	60616592	826
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000084824	processed_transcript		9	-1	117251597	1753
ENSMUSG00000039607	protein_coding	Rbms3	ENSMUST00000210659	processed_transcript		9	-1	117872584	517
ENSMUSG00000117288	processed_pseudogene	Gm49856	ENSMUST00000233362	processed_pseudogene		17	1	60739233	346
ENSMUSG00000117036	lincRNA	Gm33890	ENSMUST00000233618	lincRNA		17	-1	60958878	458
ENSMUSG00000031382	protein_coding	Asb11	ENSMUST00000036858	protein_coding	principal1	X	1	164436994	1445
ENSMUSG00000115471	TEC	C230086J09Rik	ENSMUST00000227609	TEC		14	-1	93801173	4033
ENSMUSG00000031382	protein_coding	Asb11	ENSMUST00000134085	retained_intron		X	1	164437010	1698
ENSMUSG00000115505	processed_pseudogene	Gm9247	ENSMUST00000228021	processed_pseudogene		14	-1	93195696	999
ENSMUSG00000117320	processed_pseudogene	Gm18070	ENSMUST00000232876	processed_pseudogene		17	1	61016618	748
ENSMUSG00000115632	processed_pseudogene	Gm17922	ENSMUST00000226234	processed_pseudogene		14	-1	93202901	802
ENSMUSG00000031382	protein_coding	Asb11	ENSMUST00000033755	protein_coding		X	1	164438058	1369
ENSMUSG00000115447	TEC	Gm48964	ENSMUST00000228387	TEC		14	1	93311137	2020
ENSMUSG00000106009	processed_pseudogene	Gm9379	ENSMUST00000196790	processed_pseudogene		3	-1	124589157	646
ENSMUSG00000115023	TEC	Gm48967	ENSMUST00000228155	TEC		14	1	93618846	4184
ENSMUSG00000081931	processed_pseudogene	Gm15211	ENSMUST00000118932	processed_pseudogene		X	1	164463216	528
ENSMUSG00000106423	lincRNA	Gm42825	ENSMUST00000198883	lincRNA		3	1	124839509	723
ENSMUSG00000093761	processed_pseudogene	Obox6-ps1	ENSMUST00000176658	processed_pseudogene		17	1	61360573	1042
ENSMUSG00000055421	protein_coding	Pcdh9	ENSMUST00000195826	protein_coding	principal3	14	-1	93890669	6521
ENSMUSG00000098033	processed_pseudogene	Gm9381	ENSMUST00000182285	processed_pseudogene		3	-1	125043273	1012
ENSMUSG00000055421	protein_coding	Pcdh9	ENSMUST00000193901	protein_coding	alternative1	14	-1	93890669	6127
ENSMUSG00000032443	protein_coding	Zcwpw2	ENSMUST00000111769	nonsense_mediated_decay		9	-1	118014133	1640
ENSMUSG00000031384	protein_coding	Asb9	ENSMUST00000033756	protein_coding	principal1	X	1	164506327	1139
ENSMUSG00000032443	protein_coding	Zcwpw2	ENSMUST00000217232	processed_transcript		9	-1	118014160	1057
ENSMUSG00000055421	protein_coding	Pcdh9	ENSMUST00000192221	protein_coding		14	-1	93890629	5161
ENSMUSG00000032443	protein_coding	Zcwpw2	ENSMUST00000191100	nonsense_mediated_decay		9	-1	118014160	492
ENSMUSG00000055421	protein_coding	Pcdh9	ENSMUST00000195376	protein_coding	alternative1	14	-1	93890159	5096
ENSMUSG00000080834	processed_pseudogene	Gm15216	ENSMUST00000118058	processed_pseudogene		X	1	164863607	277
ENSMUSG00000032443	protein_coding	Zcwpw2	ENSMUST00000238919	protein_coding	principal1	9	-1	118014349	1662
ENSMUSG00000055421	protein_coding	Pcdh9	ENSMUST00000194129	protein_coding		14	-1	93885748	354
ENSMUSG00000032443	protein_coding	Zcwpw2	ENSMUST00000187329	retained_intron		9	-1	118040259	1469
ENSMUSG00000032443	protein_coding	Zcwpw2	ENSMUST00000187803	protein_coding		9	-1	118014160	1507
ENSMUSG00000055421	protein_coding	Pcdh9	ENSMUST00000192817	retained_intron		14	-1	93886224	656
ENSMUSG00000097240	lincRNA	Gm26614	ENSMUST00000180386	lincRNA		9	1	117873144	3909
ENSMUSG00000055421	protein_coding	Pcdh9	ENSMUST00000194056	protein_coding		14	-1	93890679	3014
ENSMUSG00000055421	protein_coding	Pcdh9	ENSMUST00000068992	protein_coding	principal3	14	-1	93888732	3714
ENSMUSG00000027643	protein_coding	Ghrh	ENSMUST00000109536	protein_coding	principal1	2	-1	157337426	503
ENSMUSG00000027643	protein_coding	Ghrh	ENSMUST00000029172	protein_coding	principal1	2	-1	157346655	516
ENSMUSG00000027643	protein_coding	Ghrh	ENSMUST00000126630	processed_transcript		2	-1	157347506	512
ENSMUSG00000106001	TEC	Gm42826	ENSMUST00000197548	TEC		3	-1	125219553	2639
ENSMUSG00000016349	protein_coding	Eef1a2	ENSMUST00000055990	protein_coding	principal1	2	-1	181157014	2084
ENSMUSG00000117016	processed_pseudogene	Gm6174	ENSMUST00000233539	processed_pseudogene		17	1	61397310	937
ENSMUSG00000063480	protein_coding	Snu13	ENSMUST00000080622	protein_coding	principal1	15	-1	82047598	2077
ENSMUSG00000063480	protein_coding	Snu13	ENSMUST00000072904	processed_transcript		15	-1	82047535	769
ENSMUSG00000063480	protein_coding	Snu13	ENSMUST00000230953	processed_transcript		15	-1	82047519	593
ENSMUSG00000063480	protein_coding	Snu13	ENSMUST00000166578	retained_intron		15	-1	82047579	1061
ENSMUSG00000039163	protein_coding	Cmc1	ENSMUST00000044220	protein_coding	principal1	9	-1	118150177	1169
ENSMUSG00000039163	protein_coding	Cmc1	ENSMUST00000215799	protein_coding		9	-1	118150163	531
ENSMUSG00000039285	protein_coding	Azi2	ENSMUST00000143024	retained_intron		9	1	118040687	943
ENSMUSG00000042595	protein_coding	Fam199x	ENSMUST00000047852	protein_coding	principal1	X	1	137049594	8299
ENSMUSG00000015291	protein_coding	Gdi1	ENSMUST00000015435	protein_coding	principal1	X	1	74304998	2666
ENSMUSG00000015291	protein_coding	Gdi1	ENSMUST00000146013	retained_intron		X	1	74305012	3696
ENSMUSG00000015291	protein_coding	Gdi1	ENSMUST00000145580	processed_transcript		X	1	74305256	462
ENSMUSG00000015291	protein_coding	Gdi1	ENSMUST00000149391	retained_intron		X	1	74305267	2746
ENSMUSG00000015291	protein_coding	Gdi1	ENSMUST00000153141	protein_coding		X	1	74305313	527
ENSMUSG00000015291	protein_coding	Gdi1	ENSMUST00000128915	processed_transcript		X	1	74305828	566
ENSMUSG00000061778	protein_coding	Mospd2	ENSMUST00000112248	protein_coding	alternative1	X	-1	164980375	2487
ENSMUSG00000015291	protein_coding	Gdi1	ENSMUST00000144317	retained_intron		X	1	74307154	907
ENSMUSG00000061778	protein_coding	Mospd2	ENSMUST00000112247	protein_coding		X	-1	164980297	2479
ENSMUSG00000015291	protein_coding	Gdi1	ENSMUST00000130581	protein_coding		X	1	74309161	667
ENSMUSG00000015291	protein_coding	Gdi1	ENSMUST00000137447	processed_transcript		X	1	74309852	633
ENSMUSG00000015291	protein_coding	Gdi1	ENSMUST00000135041	processed_transcript		X	1	74310381	456
ENSMUSG00000061778	protein_coding	Mospd2	ENSMUST00000004715	protein_coding	principal3	X	-1	164980335	2015
ENSMUSG00000098123	processed_pseudogene	Gm4518	ENSMUST00000182638	processed_pseudogene		17	-1	61781632	718
ENSMUSG00000016344	protein_coding	Ppdpf	ENSMUST00000016488	protein_coding	principal1	2	1	181187247	1160
ENSMUSG00000098156	processed_pseudogene	Gm27023	ENSMUST00000182372	processed_pseudogene		17	1	61781683	285
ENSMUSG00000061778	protein_coding	Mospd2	ENSMUST00000134950	retained_intron		X	-1	164980328	3565
ENSMUSG00000039285	protein_coding	Azi2	ENSMUST00000135251	protein_coding		9	1	118050887	742
ENSMUSG00000061778	protein_coding	Mospd2	ENSMUST00000146813	retained_intron		X	-1	164980328	1322
ENSMUSG00000061778	protein_coding	Mospd2	ENSMUST00000124523	retained_intron		X	-1	164980325	1713
ENSMUSG00000039285	protein_coding	Azi2	ENSMUST00000127189	retained_intron		9	1	118049376	466
ENSMUSG00000063019	protein_coding	Manbal	ENSMUST00000081202	protein_coding	principal1	2	1	157367594	1107
ENSMUSG00000016344	protein_coding	Ppdpf	ENSMUST00000127971	retained_intron		2	1	181187296	1153
ENSMUSG00000061778	protein_coding	Mospd2	ENSMUST00000139792	retained_intron		X	-1	164980327	633
ENSMUSG00000039285	protein_coding	Azi2	ENSMUST00000133814	retained_intron		9	1	118055504	599
ENSMUSG00000061778	protein_coding	Mospd2	ENSMUST00000176221	processed_transcript		X	-1	164980343	333
ENSMUSG00000016344	protein_coding	Ppdpf	ENSMUST00000108841	protein_coding	principal1	2	1	181187336	689
ENSMUSG00000061778	protein_coding	Mospd2	ENSMUST00000154681	retained_intron		X	-1	164980322	511
ENSMUSG00000117160	processed_pseudogene	Gm49859	ENSMUST00000232834	processed_pseudogene		17	1	61872375	280
ENSMUSG00000117066	lincRNA	Gm49860	ENSMUST00000232942	lincRNA		17	-1	62436057	804
ENSMUSG00000016344	protein_coding	Ppdpf	ENSMUST00000146089	retained_intron		2	1	181187347	750
ENSMUSG00000016344	protein_coding	Ppdpf	ENSMUST00000138800	retained_intron		2	1	181187536	771
ENSMUSG00000016344	protein_coding	Ppdpf	ENSMUST00000135011	retained_intron		2	1	181187914	510
ENSMUSG00000039285	protein_coding	Azi2	ENSMUST00000130735	protein_coding		9	1	118049315	1407
ENSMUSG00000039285	protein_coding	Azi2	ENSMUST00000123690	protein_coding		9	1	118059056	735
ENSMUSG00000116044	processed_pseudogene	Gm49487	ENSMUST00000231150	processed_pseudogene		15	-1	82054012	361
ENSMUSG00000116304	processed_pseudogene	Gm49488	ENSMUST00000231081	processed_pseudogene		15	-1	82055830	196
ENSMUSG00000116406	processed_pseudogene	Gm49489	ENSMUST00000229578	processed_pseudogene		15	-1	82056989	352
ENSMUSG00000033220	protein_coding	Rac2	ENSMUST00000043214	protein_coding	principal1	15	-1	78572783	3038
ENSMUSG00000033220	protein_coding	Rac2	ENSMUST00000230952	protein_coding		15	-1	78564972	254
ENSMUSG00000075524	protein_coding	4930407I10Rik	ENSMUST00000100396	protein_coding	principal1	15	1	82059151	4675
ENSMUSG00000033220	protein_coding	Rac2	ENSMUST00000229394	nonsense_mediated_decay		15	-1	78572781	459
ENSMUSG00000080718	processed_pseudogene	Gm8019	ENSMUST00000119317	processed_pseudogene		X	1	137099516	587
ENSMUSG00000084086	processed_pseudogene	Gm5761	ENSMUST00000119238	processed_pseudogene		X	-1	137104722	834
ENSMUSG00000039285	protein_coding	Azi2	ENSMUST00000044454	protein_coding	principal1	9	1	118040499	3396
ENSMUSG00000047757	protein_coding	Fancb	ENSMUST00000167446	protein_coding	principal2	X	1	164980592	2953
ENSMUSG00000039285	protein_coding	Azi2	ENSMUST00000133580	protein_coding	principal1	9	1	118040557	2156
ENSMUSG00000047757	protein_coding	Fancb	ENSMUST00000057150	protein_coding	alternative2	X	1	164980712	2395
ENSMUSG00000081938	processed_pseudogene	Gm15039	ENSMUST00000118914	processed_pseudogene		X	1	137107246	875
ENSMUSG00000039285	protein_coding	Azi2	ENSMUST00000134433	protein_coding		9	1	118040579	2499
ENSMUSG00000048915	protein_coding	Efna5	ENSMUST00000076840	protein_coding	principal4	17	-1	62881317	4032
ENSMUSG00000039285	protein_coding	Azi2	ENSMUST00000154583	nonsense_mediated_decay		9	1	118040616	1817
ENSMUSG00000095988	processed_pseudogene	Gm15042	ENSMUST00000120212	processed_pseudogene		X	1	137108605	883
ENSMUSG00000048915	protein_coding	Efna5	ENSMUST00000078839	protein_coding	alternative1	17	-1	62881144	643
ENSMUSG00000097402	lincRNA	Gm17399	ENSMUST00000181824	lincRNA		9	1	118150231	1181
ENSMUSG00000103968	TEC	2610509F24Rik	ENSMUST00000193035	TEC		9	-1	118403302	838
ENSMUSG00000116097	lincRNA	Gm36738	ENSMUST00000229702	lincRNA		15	-1	78581616	394
ENSMUSG00000098161	lincRNA	Platr11	ENSMUST00000182885	lincRNA		9	-1	118406099	388
ENSMUSG00000111843	lincRNA	4933432G23Rik	ENSMUST00000213675	lincRNA		9	1	118429836	840
ENSMUSG00000018589	protein_coding	Glra2	ENSMUST00000058787	protein_coding	principal1	X	-1	165327393	3150
ENSMUSG00000082134	processed_pseudogene	Gm15236	ENSMUST00000117309	processed_pseudogene		X	1	165680204	379
ENSMUSG00000038751	protein_coding	Ptk6	ENSMUST00000016511	protein_coding	principal1	2	-1	181202789	3689
ENSMUSG00000081012	processed_pseudogene	Gm15224	ENSMUST00000120501	processed_pseudogene		X	-1	166024420	388
ENSMUSG00000083466	processed_pseudogene	Gm15225	ENSMUST00000120449	processed_pseudogene		X	1	166062237	1017
ENSMUSG00000095591	processed_pseudogene	Gm15045	ENSMUST00000117359	processed_pseudogene		X	1	137109973	883
ENSMUSG00000110692	antisense	Gm33460	ENSMUST00000212286	antisense		9	-1	118489099	536
ENSMUSG00000082011	processed_pseudogene	Gm15043	ENSMUST00000118843	processed_pseudogene		X	1	137111340	1543
ENSMUSG00000083493	processed_pseudogene	Gm15044	ENSMUST00000120703	processed_pseudogene		X	1	137113509	598
ENSMUSG00000115797	processed_pseudogene	Gm48981	ENSMUST00000227233	processed_pseudogene		14	1	93982142	105
ENSMUSG00000115613	processed_pseudogene	Gm48982	ENSMUST00000228013	processed_pseudogene		14	-1	94257165	512
ENSMUSG00000115059	processed_pseudogene	Gm48983	ENSMUST00000227079	processed_pseudogene		14	-1	94505716	347
ENSMUSG00000115638	processed_pseudogene	Gm18074	ENSMUST00000227114	processed_pseudogene		14	-1	94508794	604
ENSMUSG00000027971	protein_coding	Ndst4	ENSMUST00000173932	protein_coding	principal1	3	1	125404076	7417
ENSMUSG00000115822	lincRNA	Gm33450	ENSMUST00000227716	lincRNA		14	-1	94735465	1460
ENSMUSG00000027971	protein_coding	Ndst4	ENSMUST00000147016	retained_intron		3	1	125404090	5696
ENSMUSG00000027971	protein_coding	Ndst4	ENSMUST00000144344	protein_coding		3	1	125438714	718
ENSMUSG00000027971	protein_coding	Ndst4	ENSMUST00000174648	protein_coding		3	1	125680987	4996
ENSMUSG00000032446	protein_coding	Eomes	ENSMUST00000111763	protein_coding	alternative2	9	1	118478212	2869
ENSMUSG00000027971	protein_coding	Ndst4	ENSMUST00000172632	processed_transcript		3	1	125680997	1042
ENSMUSG00000027971	protein_coding	Ndst4	ENSMUST00000198101	protein_coding		3	1	125710086	471
ENSMUSG00000040621	protein_coding	Gemin8	ENSMUST00000130880	protein_coding	principal3	X	1	166170454	1389
ENSMUSG00000032446	protein_coding	Eomes	ENSMUST00000035020	protein_coding	principal3	9	1	118478344	3560
ENSMUSG00000040621	protein_coding	Gemin8	ENSMUST00000056410	protein_coding	principal3	X	1	166170454	1862
ENSMUSG00000032446	protein_coding	Eomes	ENSMUST00000150633	protein_coding		9	1	118478861	1647
ENSMUSG00000040621	protein_coding	Gemin8	ENSMUST00000096252	protein_coding	alternative2	X	1	166170492	1039
ENSMUSG00000027579	protein_coding	Srms	ENSMUST00000016498	protein_coding	principal1	2	-1	181213185	2562
ENSMUSG00000040621	protein_coding	Gemin8	ENSMUST00000087169	protein_coding	principal3	X	1	166170495	1928
ENSMUSG00000040621	protein_coding	Gemin8	ENSMUST00000166440	protein_coding		X	1	166178402	720
ENSMUSG00000040621	protein_coding	Gemin8	ENSMUST00000152248	protein_coding		X	1	166178423	964
ENSMUSG00000084080	processed_pseudogene	Gm15227	ENSMUST00000121844	processed_pseudogene		X	1	166205854	399
ENSMUSG00000023443	protein_coding	Esx1	ENSMUST00000113066	protein_coding	alternative2	X	-1	137120171	1692
ENSMUSG00000023443	protein_coding	Esx1	ENSMUST00000074698	protein_coding	principal2	X	-1	137120326	1600
ENSMUSG00000001962	protein_coding	Fam50a	ENSMUST00000114160	protein_coding	principal1	X	1	74313033	1383
ENSMUSG00000023443	protein_coding	Esx1	ENSMUST00000155283	protein_coding		X	-1	137122083	556
ENSMUSG00000001962	protein_coding	Fam50a	ENSMUST00000138242	retained_intron		X	1	74313126	1918
ENSMUSG00000001962	protein_coding	Fam50a	ENSMUST00000149312	retained_intron		X	1	74317468	368
ENSMUSG00000115331	processed_pseudogene	Gm9721	ENSMUST00000226480	processed_pseudogene		14	1	95148616	714
ENSMUSG00000083993	processed_pseudogene	Gm14398	ENSMUST00000117287	processed_pseudogene		2	1	181216727	1073
ENSMUSG00000115038	processed_pseudogene	Gm48989	ENSMUST00000226325	processed_pseudogene		14	1	95261017	1054
ENSMUSG00000115379	processed_pseudogene	Gm48990	ENSMUST00000227743	processed_pseudogene		14	-1	95285656	423
ENSMUSG00000115499	processed_pseudogene	Gm48991	ENSMUST00000227728	processed_pseudogene		14	-1	95339527	277
ENSMUSG00000115396	processed_pseudogene	Gm48994	ENSMUST00000228858	processed_pseudogene		14	1	95339630	366
ENSMUSG00000082696	processed_pseudogene	Gm15040	ENSMUST00000118561	processed_pseudogene		X	1	137128110	1241
ENSMUSG00000081349	processed_pseudogene	Gm15041	ENSMUST00000119048	processed_pseudogene		X	1	137130916	756
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000226979	protein_coding		14	1	55823144	325
ENSMUSG00000082955	processed_pseudogene	Gm8036	ENSMUST00000118089	processed_pseudogene		X	-1	137206763	1718
ENSMUSG00000015377	protein_coding	Dennd6b	ENSMUST00000078953	protein_coding	principal1	15	-1	89196448	4585
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000084820	protein_coding	principal1	9	1	118506267	7583
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000212593	retained_intron		9	1	118506271	2309
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000212097	protein_coding		9	1	118506451	2858
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000212461	protein_coding		9	1	118514180	1363
ENSMUSG00000047841	protein_coding	Fndc11	ENSMUST00000050026	protein_coding		2	1	181220013	1387
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000212183	nonsense_mediated_decay		9	1	118536855	1237
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000212620	retained_intron		9	1	118545197	2963
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000212913	retained_intron		9	1	118548408	582
ENSMUSG00000047841	protein_coding	Fndc11	ENSMUST00000108835	protein_coding	principal1	2	1	181220037	1154
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000211840	protein_coding		9	1	118556780	4461
ENSMUSG00000115243	processed_pseudogene	Gm5207	ENSMUST00000228617	processed_pseudogene		14	1	95419786	1578
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000212274	nonsense_mediated_decay		9	1	118560361	615
ENSMUSG00000115679	processed_pseudogene	Gm48995	ENSMUST00000228033	processed_pseudogene		14	-1	95729980	481
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000212151	retained_intron		9	1	118565276	611
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000211846	nonsense_mediated_decay		9	1	118565632	796
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000211838	retained_intron		9	1	118572772	362
ENSMUSG00000038708	protein_coding	Golga4	ENSMUST00000211826	retained_intron		9	1	118576593	687
ENSMUSG00000110627	processed_pseudogene	Gm18935	ENSMUST00000212692	processed_pseudogene		9	-1	118572271	664
ENSMUSG00000034689	protein_coding	Spertl	ENSMUST00000228913	protein_coding	principal1	14	1	95881254	1115
ENSMUSG00000110676	lincRNA	Gm45897	ENSMUST00000212679	lincRNA		9	-1	118590195	1998
ENSMUSG00000015377	protein_coding	Dennd6b	ENSMUST00000229935	retained_intron		15	-1	89196496	5261
ENSMUSG00000034689	protein_coding	Spertl	ENSMUST00000045892	protein_coding	principal1	14	1	95881266	1161
ENSMUSG00000015377	protein_coding	Dennd6b	ENSMUST00000229416	retained_intron		15	-1	89188844	1969
ENSMUSG00000115029	processed_pseudogene	Gm18885	ENSMUST00000226318	processed_pseudogene		14	1	95932960	1636
ENSMUSG00000015377	protein_coding	Dennd6b	ENSMUST00000230111	retained_intron		15	-1	89190309	1904
ENSMUSG00000115603	processed_pseudogene	Gm19099	ENSMUST00000226824	processed_pseudogene		14	-1	95982700	721
ENSMUSG00000015377	protein_coding	Dennd6b	ENSMUST00000229755	nonsense_mediated_decay		15	-1	89196444	2677
ENSMUSG00000015377	protein_coding	Dennd6b	ENSMUST00000230823	retained_intron		15	-1	89196465	2028
ENSMUSG00000081017	processed_pseudogene	Gm15000	ENSMUST00000118275	processed_pseudogene		X	-1	138523748	1243
ENSMUSG00000071686	protein_coding	Tex13a	ENSMUST00000096314	protein_coding	principal1	X	-1	138209580	1317
ENSMUSG00000083053	processed_pseudogene	Gm15001	ENSMUST00000117657	processed_pseudogene		X	-1	138744444	795
ENSMUSG00000084118	processed_pseudogene	Gm14989	ENSMUST00000120497	processed_pseudogene		X	-1	138085813	207
ENSMUSG00000082135	processed_pseudogene	Gm14988	ENSMUST00000117224	processed_pseudogene		X	-1	137642316	1548
ENSMUSG00000059203	protein_coding	Il1rapl2	ENSMUST00000113063	protein_coding	principal1	X	1	137570608	3437
ENSMUSG00000059203	protein_coding	Il1rapl2	ENSMUST00000130879	retained_intron		X	1	137571019	2670
ENSMUSG00000059203	protein_coding	Il1rapl2	ENSMUST00000075471	protein_coding	principal1	X	1	137651720	2061
ENSMUSG00000047409	protein_coding	Ctdspl	ENSMUST00000073109	protein_coding	principal2	9	1	118926453	4589
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000024179	protein_coding	principal3	14	1	55824795	3267
ENSMUSG00000047409	protein_coding	Ctdspl	ENSMUST00000172464	protein_coding	alternative2	9	1	118926862	798
ENSMUSG00000047409	protein_coding	Ctdspl	ENSMUST00000174841	processed_transcript		9	1	118929867	506
ENSMUSG00000047409	protein_coding	Ctdspl	ENSMUST00000174132	retained_intron		9	1	119033001	1200
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000172271	protein_coding	alternative2	14	1	55825037	3775
ENSMUSG00000066270	processed_pseudogene	Gm10157	ENSMUST00000139408	processed_pseudogene		9	-1	118837955	343
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000226357	protein_coding	alternative2	14	1	55825801	2680
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000227746	retained_intron		14	1	55827038	540
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000228308	protein_coding		14	1	55829469	509
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000226834	retained_intron		14	1	55829471	916
ENSMUSG00000022076	protein_coding	Klhl1	ENSMUST00000022666	protein_coding	principal1	14	-1	96519102	6645
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000226536	retained_intron		14	1	55830269	1161
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000226716	retained_intron		14	1	55830269	1913
ENSMUSG00000083933	processed_pseudogene	Gm15515	ENSMUST00000117827	processed_pseudogene		14	1	96231953	822
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000226293	retained_intron		14	1	55830269	2969
ENSMUSG00000023411	protein_coding	Nfatc4	ENSMUST00000226869	retained_intron		14	1	55830269	2217
ENSMUSG00000115535	processed_pseudogene	Gm49006	ENSMUST00000226638	processed_pseudogene		14	1	96675070	481
ENSMUSG00000115315	processed_pseudogene	Gnb1-ps2	ENSMUST00000228771	processed_pseudogene		14	-1	96700609	337
ENSMUSG00000115714	processed_pseudogene	Gm18926	ENSMUST00000226711	processed_pseudogene		14	-1	96891511	814
ENSMUSG00000115052	processed_pseudogene	Gm9287	ENSMUST00000227292	processed_pseudogene		14	1	96967825	914
ENSMUSG00000115601	lincRNA	Gm49007	ENSMUST00000227308	lincRNA		14	-1	96992293	2445
ENSMUSG00000115229	lincRNA	Gm33525	ENSMUST00000228946	lincRNA		14	-1	97052968	826
ENSMUSG00000115598	processed_pseudogene	Gm9290	ENSMUST00000227015	processed_pseudogene		14	-1	97666291	620
ENSMUSG00000091426	processed_pseudogene	Gm17228	ENSMUST00000165006	processed_pseudogene		17	-1	63347410	491
ENSMUSG00000090565	sense_intronic	4930405O22Rik	ENSMUST00000164605	sense_intronic		17	-1	63312971	954
ENSMUSG00000090565	sense_intronic	4930405O22Rik	ENSMUST00000171379	sense_intronic		17	-1	63312973	834
ENSMUSG00000039115	protein_coding	Itga9	ENSMUST00000044165	protein_coding	principal1	9	1	118606690	7020
ENSMUSG00000039115	protein_coding	Itga9	ENSMUST00000125021	processed_transcript		9	1	118685835	650
ENSMUSG00000023965	protein_coding	Fbxl17	ENSMUST00000024761	protein_coding	principal1	17	-1	63500017	4925
ENSMUSG00000039115	protein_coding	Itga9	ENSMUST00000124360	protein_coding		9	1	118711657	1935
ENSMUSG00000039115	protein_coding	Itga9	ENSMUST00000149150	protein_coding		9	1	118807284	649
ENSMUSG00000023965	protein_coding	Fbxl17	ENSMUST00000112839	processed_transcript		17	-1	63456166	3324
ENSMUSG00000039115	protein_coding	Itga9	ENSMUST00000124422	processed_transcript		9	1	118839628	603
ENSMUSG00000023965	protein_coding	Fbxl17	ENSMUST00000112840	protein_coding		17	-1	63492753	3667
ENSMUSG00000039115	protein_coding	Itga9	ENSMUST00000155437	processed_transcript		9	1	118872069	506
ENSMUSG00000023965	protein_coding	Fbxl17	ENSMUST00000169134	processed_transcript		17	-1	63451711	2063
ENSMUSG00000086119	antisense	Gm2415	ENSMUST00000134688	antisense		9	-1	118926259	401
ENSMUSG00000023965	protein_coding	Fbxl17	ENSMUST00000090318	processed_transcript		17	-1	63481290	376
ENSMUSG00000086119	antisense	Gm2415	ENSMUST00000149952	antisense		9	-1	118926269	435
ENSMUSG00000086119	antisense	Gm2415	ENSMUST00000128982	antisense		9	-1	118926258	1474
ENSMUSG00000111186	TEC	Gm48135	ENSMUST00000216490	TEC		9	-1	45414090	618
ENSMUSG00000086119	antisense	Gm2415	ENSMUST00000190235	antisense		9	-1	118926455	2004
ENSMUSG00000087041	lincRNA	Gm16295	ENSMUST00000139512	lincRNA		9	1	118924873	643
ENSMUSG00000086133	processed_pseudogene	Gm16331	ENSMUST00000144274	processed_pseudogene		14	1	98118509	498
ENSMUSG00000038775	protein_coding	Vill	ENSMUST00000135872	retained_intron		9	1	119052778	324
ENSMUSG00000055639	protein_coding	Dach1	ENSMUST00000071533	protein_coding	principal4	14	-1	98169543	5219
ENSMUSG00000055639	protein_coding	Dach1	ENSMUST00000069334	protein_coding	alternative2	14	-1	98169543	5063
ENSMUSG00000055639	protein_coding	Dach1	ENSMUST00000156684	retained_intron		14	-1	98169765	4394
ENSMUSG00000027580	protein_coding	Helz2	ENSMUST00000094203	protein_coding	alternative2	2	-1	181242025	9162
ENSMUSG00000027580	protein_coding	Helz2	ENSMUST00000155049	retained_intron		2	-1	181242025	2800
ENSMUSG00000027580	protein_coding	Helz2	ENSMUST00000121484	protein_coding		2	-1	181241963	10063
ENSMUSG00000027580	protein_coding	Helz2	ENSMUST00000149417	retained_intron		2	-1	181235754	7787
ENSMUSG00000027580	protein_coding	Helz2	ENSMUST00000108831	protein_coding	principal2	2	-1	181242027	10109
ENSMUSG00000038775	protein_coding	Vill	ENSMUST00000051386	protein_coding	principal1	9	1	119052778	2909
ENSMUSG00000038775	protein_coding	Vill	ENSMUST00000153454	retained_intron		9	1	119052778	3901
ENSMUSG00000038775	protein_coding	Vill	ENSMUST00000074734	protein_coding		9	1	119052802	2440
ENSMUSG00000038775	protein_coding	Vill	ENSMUST00000131647	protein_coding		9	1	119052865	360
ENSMUSG00000038775	protein_coding	Vill	ENSMUST00000141185	protein_coding		9	1	119063448	1645
ENSMUSG00000038775	protein_coding	Vill	ENSMUST00000126251	protein_coding		9	1	119063454	1411
ENSMUSG00000027646	protein_coding	Src	ENSMUST00000109533	protein_coding	principal3	2	1	157418444	3813
ENSMUSG00000038775	protein_coding	Vill	ENSMUST00000153630	processed_transcript		9	1	119063455	477
ENSMUSG00000027646	protein_coding	Src	ENSMUST00000145715	processed_transcript		2	1	157424116	416
ENSMUSG00000038775	protein_coding	Vill	ENSMUST00000136561	protein_coding		9	1	119063458	558
ENSMUSG00000038775	protein_coding	Vill	ENSMUST00000151638	processed_transcript		9	1	119063482	227
ENSMUSG00000027646	protein_coding	Src	ENSMUST00000029175	protein_coding	principal3	2	1	157424280	3906
ENSMUSG00000027646	protein_coding	Src	ENSMUST00000133900	processed_transcript		2	1	157424392	222
ENSMUSG00000027646	protein_coding	Src	ENSMUST00000129770	processed_transcript		2	1	157424392	630
ENSMUSG00000027646	protein_coding	Src	ENSMUST00000109531	protein_coding	principal3	2	1	157455671	3586
ENSMUSG00000027646	protein_coding	Src	ENSMUST00000109529	protein_coding	alternative1	2	1	157457085	2020
ENSMUSG00000027646	protein_coding	Src	ENSMUST00000092576	protein_coding	alternative1	2	1	157424293	3887
ENSMUSG00000052854	protein_coding	Nrk	ENSMUST00000113052	protein_coding	alternative2	X	1	138914431	8043
ENSMUSG00000052854	protein_coding	Nrk	ENSMUST00000131829	nonsense_mediated_decay		X	1	138914431	7458
ENSMUSG00000052854	protein_coding	Nrk	ENSMUST00000155201	retained_intron		X	1	138982718	1837
ENSMUSG00000052854	protein_coding	Nrk	ENSMUST00000142132	processed_transcript		X	1	138914431	904
ENSMUSG00000052854	protein_coding	Nrk	ENSMUST00000064937	protein_coding	principal2	X	1	138914430	6604
ENSMUSG00000010660	protein_coding	Plcd1	ENSMUST00000214470	protein_coding		9	-1	119088261	2706
ENSMUSG00000010660	protein_coding	Plcd1	ENSMUST00000213464	nonsense_mediated_decay		9	-1	119093502	2715
ENSMUSG00000010660	protein_coding	Plcd1	ENSMUST00000010804	protein_coding	principal1	9	-1	119093502	2657
ENSMUSG00000010660	protein_coding	Plcd1	ENSMUST00000214491	processed_transcript		9	-1	119074303	674
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000217335	processed_transcript		9	1	45426628	1231
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000217538	processed_transcript		9	1	45426643	1375
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000213919	processed_transcript		9	1	45426643	1739
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000216340	processed_transcript		9	1	45427221	435
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000239471	protein_coding	principal2	9	1	45430291	6436
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000034592	protein_coding	alternative2	9	1	45430291	6886
ENSMUSG00000038060	protein_coding	Dlec1	ENSMUST00000124213	retained_intron		9	1	119102478	2318
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000216078	nonsense_mediated_decay		9	1	45672837	902
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000216685	nonsense_mediated_decay		9	1	45702610	1266
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000215027	retained_intron		9	1	45742409	832
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000214151	retained_intron		9	1	45750699	1475
ENSMUSG00000032087	protein_coding	Dscaml1	ENSMUST00000239429	protein_coding	principal2	9	1	45430293	6336
ENSMUSG00000097074	antisense	4833428L15Rik	ENSMUST00000181230	antisense		9	-1	45431232	1259
ENSMUSG00000097074	antisense	4833428L15Rik	ENSMUST00000215652	antisense		9	-1	45431730	641
ENSMUSG00000038060	protein_coding	Dlec1	ENSMUST00000140326	protein_coding	alternative2	9	1	119102478	5815
ENSMUSG00000038060	protein_coding	Dlec1	ENSMUST00000055775	nonsense_mediated_decay		9	1	119102509	2746
ENSMUSG00000038060	protein_coding	Dlec1	ENSMUST00000137047	retained_intron		9	1	119119654	3697
ENSMUSG00000038060	protein_coding	Dlec1	ENSMUST00000138736	retained_intron		9	1	119127015	417
ENSMUSG00000032854	protein_coding	Ugt8a	ENSMUST00000057944	protein_coding	principal1	3	-1	125938619	3740
ENSMUSG00000038060	protein_coding	Dlec1	ENSMUST00000128211	retained_intron		9	1	119128370	546
ENSMUSG00000038060	protein_coding	Dlec1	ENSMUST00000148611	retained_intron		9	1	119128521	380
ENSMUSG00000032854	protein_coding	Ugt8a	ENSMUST00000198610	protein_coding	principal1	3	-1	125915885	3762
ENSMUSG00000038060	protein_coding	Dlec1	ENSMUST00000165231	protein_coding	principal2	9	1	119102478	5263
ENSMUSG00000032854	protein_coding	Ugt8a	ENSMUST00000196481	retained_intron		3	-1	125938551	1295
ENSMUSG00000068117	protein_coding	Mei1	ENSMUST00000089178	protein_coding	alternative2	15	1	82069997	3956
ENSMUSG00000068117	protein_coding	Mei1	ENSMUST00000189540	protein_coding	principal2	15	1	82082464	3718
ENSMUSG00000068117	protein_coding	Mei1	ENSMUST00000188048	protein_coding	principal2	15	1	82082476	3197
ENSMUSG00000068117	protein_coding	Mei1	ENSMUST00000186125	nonsense_mediated_decay		15	1	82083163	2848
ENSMUSG00000068117	protein_coding	Mei1	ENSMUST00000229119	protein_coding		15	1	82069996	4130
ENSMUSG00000010651	protein_coding	Acaa1b	ENSMUST00000010795	protein_coding	principal1	9	-1	119157093	1689
ENSMUSG00000010651	protein_coding	Acaa1b	ENSMUST00000127952	retained_intron		9	-1	119150063	580
ENSMUSG00000115218	processed_pseudogene	Gm46477	ENSMUST00000226945	processed_pseudogene		14	-1	98274269	421
ENSMUSG00000115486	processed_pseudogene	Gm49017	ENSMUST00000226609	processed_pseudogene		14	-1	98519700	285
ENSMUSG00000074029	lincRNA	Gm47289	ENSMUST00000093527	lincRNA		9	1	119159161	2509
ENSMUSG00000111197	processed_pseudogene	Gm10608	ENSMUST00000213924	processed_pseudogene		9	1	119162730	676
ENSMUSG00000098059	processed_pseudogene	Gm27034	ENSMUST00000182552	processed_pseudogene		14	1	98714813	940
ENSMUSG00000115242	lincRNA	Gm49018	ENSMUST00000226462	lincRNA		14	-1	98920945	1208
ENSMUSG00000115567	processed_pseudogene	Gm18148	ENSMUST00000226946	processed_pseudogene		14	1	98922654	680
ENSMUSG00000031271	protein_coding	Serpina7	ENSMUST00000033626	protein_coding	principal1	X	-1	139085215	2330
ENSMUSG00000031271	protein_coding	Serpina7	ENSMUST00000060824	protein_coding		X	-1	139085217	1895
ENSMUSG00000031271	protein_coding	Serpina7	ENSMUST00000152457	protein_coding		X	-1	139085236	379
ENSMUSG00000060377	protein_coding	Rpl36a-ps1	ENSMUST00000081987	protein_coding	principal1	14	-1	98994318	449
ENSMUSG00000038705	protein_coding	Gmeb2	ENSMUST00000049032	protein_coding	principal1	2	-1	181288035	4121
ENSMUSG00000038705	protein_coding	Gmeb2	ENSMUST00000141110	nonsense_mediated_decay		2	-1	181278082	1600
ENSMUSG00000038705	protein_coding	Gmeb2	ENSMUST00000147665	retained_intron		2	-1	181288031	642
ENSMUSG00000038705	protein_coding	Gmeb2	ENSMUST00000141003	nonsense_mediated_decay		2	-1	181288016	811
ENSMUSG00000038705	protein_coding	Gmeb2	ENSMUST00000130475	protein_coding		2	-1	181287074	765
ENSMUSG00000038705	protein_coding	Gmeb2	ENSMUST00000123148	retained_intron		2	-1	181256131	888
ENSMUSG00000031270	protein_coding	4930513O06Rik	ENSMUST00000033625	protein_coding	principal1	X	1	139086243	804
ENSMUSG00000033186	protein_coding	Mzt1	ENSMUST00000042662	protein_coding	principal1	14	-1	99046120	2240
ENSMUSG00000033186	protein_coding	Mzt1	ENSMUST00000227948	protein_coding		14	-1	99046093	952
ENSMUSG00000033186	protein_coding	Mzt1	ENSMUST00000228445	processed_transcript		14	-1	99046134	818
ENSMUSG00000033186	protein_coding	Mzt1	ENSMUST00000227197	processed_transcript		14	-1	99045952	697
ENSMUSG00000042525	protein_coding	4933428M09Rik	ENSMUST00000113046	protein_coding	principal1	X	1	139179228	1026
ENSMUSG00000083180	processed_pseudogene	Gm15007	ENSMUST00000119982	processed_pseudogene		X	-1	139202051	710
ENSMUSG00000036737	protein_coding	Oxsr1	ENSMUST00000040853	protein_coding	principal1	9	-1	119322427	4647
ENSMUSG00000036737	protein_coding	Oxsr1	ENSMUST00000128880	nonsense_mediated_decay		9	-1	119322322	2433
ENSMUSG00000036737	protein_coding	Oxsr1	ENSMUST00000136902	retained_intron		9	-1	119243362	780
ENSMUSG00000036737	protein_coding	Oxsr1	ENSMUST00000143728	nonsense_mediated_decay		9	-1	119264772	507
ENSMUSG00000092212	polymorphic_pseudogene	Slc22a13b	ENSMUST00000173185	polymorphic_pseudogene	principal1	9	-1	119231692	1458
ENSMUSG00000036138	protein_coding	Acaa1a	ENSMUST00000176351	protein_coding		9	1	119339676	646
ENSMUSG00000036138	protein_coding	Acaa1a	ENSMUST00000177463	protein_coding		9	1	119341047	840
ENSMUSG00000042515	protein_coding	Pwwp3b	ENSMUST00000113043	protein_coding	principal1	X	1	139210042	4600
ENSMUSG00000042515	protein_coding	Pwwp3b	ENSMUST00000139359	retained_intron		X	1	139210108	450
ENSMUSG00000042515	protein_coding	Pwwp3b	ENSMUST00000166444	protein_coding		X	1	139217166	649
ENSMUSG00000042515	protein_coding	Pwwp3b	ENSMUST00000169886	protein_coding		X	1	139210042	1165
ENSMUSG00000042515	protein_coding	Pwwp3b	ENSMUST00000170671	protein_coding		X	1	139217166	1049
ENSMUSG00000036138	protein_coding	Acaa1a	ENSMUST00000039784	protein_coding	principal1	9	1	119341294	1762
ENSMUSG00000042515	protein_coding	Pwwp3b	ENSMUST00000113045	protein_coding	principal1	X	1	139210044	4523
ENSMUSG00000042515	protein_coding	Pwwp3b	ENSMUST00000113041	protein_coding	principal1	X	1	139217166	4343
ENSMUSG00000042515	protein_coding	Pwwp3b	ENSMUST00000113042	protein_coding	principal1	X	1	139217166	4182
ENSMUSG00000036138	protein_coding	Acaa1a	ENSMUST00000176796	retained_intron		9	1	119341414	3668
ENSMUSG00000036138	protein_coding	Acaa1a	ENSMUST00000175859	retained_intron		9	1	119341457	917
ENSMUSG00000036138	protein_coding	Acaa1a	ENSMUST00000175743	protein_coding		9	1	119341515	1219
ENSMUSG00000084033	processed_pseudogene	Gm7645	ENSMUST00000119008	processed_pseudogene		2	1	181292148	788
ENSMUSG00000036138	protein_coding	Acaa1a	ENSMUST00000176397	protein_coding		9	1	119341515	996
ENSMUSG00000036138	protein_coding	Acaa1a	ENSMUST00000176546	nonsense_mediated_decay		9	1	119342773	768
ENSMUSG00000036138	protein_coding	Acaa1a	ENSMUST00000176007	retained_intron		9	1	119346098	727
ENSMUSG00000036138	protein_coding	Acaa1a	ENSMUST00000175719	retained_intron		9	1	119348505	383
ENSMUSG00000022070	protein_coding	Bora	ENSMUST00000226823	retained_intron		14	1	99046222	1071
ENSMUSG00000022070	protein_coding	Bora	ENSMUST00000022656	protein_coding	principal1	14	1	99046377	2726
ENSMUSG00000022070	protein_coding	Bora	ENSMUST00000228082	retained_intron		14	1	99046454	881
ENSMUSG00000022070	protein_coding	Bora	ENSMUST00000227744	nonsense_mediated_decay		14	1	99046476	3834
ENSMUSG00000022070	protein_coding	Bora	ENSMUST00000227128	nonsense_mediated_decay		14	1	99046480	704
ENSMUSG00000035769	protein_coding	Xylb	ENSMUST00000039610	protein_coding	principal1	9	1	119357381	3383
ENSMUSG00000035769	protein_coding	Xylb	ENSMUST00000215305	processed_transcript		9	1	119357569	367
ENSMUSG00000051257	protein_coding	Trap1a	ENSMUST00000054534	protein_coding	principal1	X	1	139333683	1178
ENSMUSG00000081869	processed_pseudogene	Gm15002	ENSMUST00000118406	processed_pseudogene		X	-1	139257611	452
ENSMUSG00000086807	processed_transcript	Platr21	ENSMUST00000126339	processed_transcript		X	-1	139356770	3511
ENSMUSG00000086807	processed_transcript	Platr21	ENSMUST00000126591	processed_transcript		X	-1	139357738	712
ENSMUSG00000035769	protein_coding	Xylb	ENSMUST00000215822	nonsense_mediated_decay		9	1	119357569	3134
ENSMUSG00000035769	protein_coding	Xylb	ENSMUST00000216838	nonsense_mediated_decay		9	1	119357587	3702
ENSMUSG00000035769	protein_coding	Xylb	ENSMUST00000213383	retained_intron		9	1	119378191	2406
ENSMUSG00000027581	protein_coding	Stmn3	ENSMUST00000103045	protein_coding	principal1	2	-1	181314500	1136
ENSMUSG00000074028	protein_coding	Slc22a13	ENSMUST00000084797	protein_coding	principal1	9	-1	119209098	2001
ENSMUSG00000084205	processed_pseudogene	Gm8061	ENSMUST00000122380	processed_pseudogene		X	1	139358468	350
ENSMUSG00000070280	protein_coding	Slc22a14	ENSMUST00000093775	protein_coding	principal1	9	-1	119190407	2213
ENSMUSG00000070280	protein_coding	Slc22a14	ENSMUST00000152061	protein_coding		9	-1	119173652	589
ENSMUSG00000070280	protein_coding	Slc22a14	ENSMUST00000127794	protein_coding		9	-1	119190362	340
ENSMUSG00000070280	protein_coding	Slc22a14	ENSMUST00000170400	protein_coding	principal1	9	-1	119365553	2110
ENSMUSG00000032508	protein_coding	Myd88	ENSMUST00000035092	protein_coding	principal1	9	-1	119340041	1960
ENSMUSG00000032508	protein_coding	Myd88	ENSMUST00000150837	retained_intron		9	-1	119340002	2458
ENSMUSG00000032508	protein_coding	Myd88	ENSMUST00000139870	protein_coding		9	-1	119341411	379
ENSMUSG00000042498	protein_coding	Radx	ENSMUST00000046763	protein_coding	alternative2	X	1	139480367	3737
ENSMUSG00000042498	protein_coding	Radx	ENSMUST00000125750	processed_transcript		X	1	139480371	365
ENSMUSG00000042498	protein_coding	Radx	ENSMUST00000113030	protein_coding	principal3	X	1	139480371	3736
ENSMUSG00000111204	antisense	Gm47320	ENSMUST00000217028	antisense		9	-1	119409016	397
ENSMUSG00000061393	protein_coding	Acvr2b	ENSMUST00000165044	protein_coding		9	1	119402118	2093
ENSMUSG00000061393	protein_coding	Acvr2b	ENSMUST00000215746	protein_coding	principal1	9	1	119402444	3175
ENSMUSG00000061393	protein_coding	Acvr2b	ENSMUST00000217621	retained_intron		9	1	119430346	599
ENSMUSG00000061393	protein_coding	Acvr2b	ENSMUST00000213389	retained_intron		9	1	119432410	544
ENSMUSG00000061393	protein_coding	Acvr2b	ENSMUST00000213431	retained_intron		9	1	119432438	514
ENSMUSG00000061393	protein_coding	Acvr2b	ENSMUST00000035093	protein_coding		9	1	119402444	1729
ENSMUSG00000097504	lincRNA	4930516B21Rik	ENSMUST00000181600	lincRNA		9	-1	119444830	1195
ENSMUSG00000022064	protein_coding	Pibf1	ENSMUST00000228246	retained_intron		14	1	99099424	1546
ENSMUSG00000042787	protein_coding	Exog	ENSMUST00000035094	protein_coding	principal1	9	1	119444943	3832
ENSMUSG00000022064	protein_coding	Pibf1	ENSMUST00000022650	protein_coding	principal1	14	1	99099907	2797
ENSMUSG00000022064	protein_coding	Pibf1	ENSMUST00000228598	retained_intron		14	1	99099931	3976
ENSMUSG00000022064	protein_coding	Pibf1	ENSMUST00000228354	retained_intron		14	1	99099945	2653
ENSMUSG00000022064	protein_coding	Pibf1	ENSMUST00000228279	retained_intron		14	1	99099958	1993
ENSMUSG00000042787	protein_coding	Exog	ENSMUST00000164213	nonsense_mediated_decay		9	1	119444960	2571
ENSMUSG00000022064	protein_coding	Pibf1	ENSMUST00000227969	retained_intron		14	1	99133285	3363
ENSMUSG00000022064	protein_coding	Pibf1	ENSMUST00000228288	processed_transcript		14	1	99176551	1253
ENSMUSG00000042787	protein_coding	Exog	ENSMUST00000215819	retained_intron		9	1	119444976	5060
ENSMUSG00000042787	protein_coding	Exog	ENSMUST00000214140	nonsense_mediated_decay		9	1	119444977	2380
ENSMUSG00000022064	protein_coding	Pibf1	ENSMUST00000226935	retained_intron		14	1	99176571	1083
ENSMUSG00000042787	protein_coding	Exog	ENSMUST00000214462	nonsense_mediated_decay		9	1	119444987	2624
ENSMUSG00000115071	TEC	Gm49026	ENSMUST00000226897	TEC		14	1	99111677	1138
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000112235	protein_coding		X	1	166238911	4480
ENSMUSG00000033166	protein_coding	Dis3	ENSMUST00000042471	protein_coding	principal1	14	-1	99099770	5150
ENSMUSG00000033166	protein_coding	Dis3	ENSMUST00000227022	nonsense_mediated_decay		14	-1	99099764	3590
ENSMUSG00000033166	protein_coding	Dis3	ENSMUST00000228756	retained_intron		14	-1	99078683	672
ENSMUSG00000033166	protein_coding	Dis3	ENSMUST00000228643	nonsense_mediated_decay		14	-1	99099740	2971
ENSMUSG00000033166	protein_coding	Dis3	ENSMUST00000228449	retained_intron		14	-1	99098930	3726
ENSMUSG00000033166	protein_coding	Dis3	ENSMUST00000227001	processed_transcript		14	-1	99099340	356
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000060210	protein_coding	principal3	X	1	166238972	2858
ENSMUSG00000031438	protein_coding	Rnf128	ENSMUST00000113027	protein_coding		X	1	139563316	2641
ENSMUSG00000031438	protein_coding	Rnf128	ENSMUST00000113026	protein_coding	principal1	X	1	139610620	2750
ENSMUSG00000031438	protein_coding	Rnf128	ENSMUST00000113029	processed_transcript		X	1	139611367	821
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000112233	protein_coding		X	1	166238972	2949
ENSMUSG00000082018	processed_pseudogene	Gm6322	ENSMUST00000118789	processed_pseudogene		X	-1	139677489	1004
ENSMUSG00000032511	protein_coding	Scn5a	ENSMUST00000117911	protein_coding	principal3	9	-1	119579016	8453
ENSMUSG00000032511	protein_coding	Scn5a	ENSMUST00000120420	protein_coding	alternative1	9	-1	119579016	7536
ENSMUSG00000032511	protein_coding	Scn5a	ENSMUST00000138934	protein_coding		9	-1	119563503	359
ENSMUSG00000032511	protein_coding	Scn5a	ENSMUST00000065196	protein_coding	alternative1	9	-1	119562678	8287
ENSMUSG00000068114	protein_coding	Ccdc134	ENSMUST00000089174	protein_coding	principal1	15	1	82127922	2046
ENSMUSG00000068114	protein_coding	Ccdc134	ENSMUST00000229788	processed_transcript		15	1	82127927	368
ENSMUSG00000068114	protein_coding	Ccdc134	ENSMUST00000230582	retained_intron		15	1	82127978	536
ENSMUSG00000068114	protein_coding	Ccdc134	ENSMUST00000229456	retained_intron		15	1	82127996	4919
ENSMUSG00000068114	protein_coding	Ccdc134	ENSMUST00000229597	nonsense_mediated_decay		15	1	82128007	745
ENSMUSG00000068114	protein_coding	Ccdc134	ENSMUST00000229411	nonsense_mediated_decay		15	1	82128025	1854
ENSMUSG00000068114	protein_coding	Ccdc134	ENSMUST00000229384	nonsense_mediated_decay		15	1	82130055	807
ENSMUSG00000098559	protein_coding	Gm15013	ENSMUST00000183537	translated_processed_pseudogene		X	-1	139714481	801
ENSMUSG00000098559	protein_coding	Gm15013	ENSMUST00000183728	protein_coding	principal1	X	-1	139714481	801
ENSMUSG00000042473	protein_coding	Tbc1d8b	ENSMUST00000096313	protein_coding	principal1	X	1	139684996	5094
ENSMUSG00000042473	protein_coding	Tbc1d8b	ENSMUST00000123430	processed_transcript		X	1	139736172	758
ENSMUSG00000100172	processed_pseudogene	Gm4412	ENSMUST00000186660	processed_pseudogene		14	-1	99291636	433
ENSMUSG00000034533	protein_coding	Scn10a	ENSMUST00000213392	protein_coding	alternative2	9	-1	119719322	6692
ENSMUSG00000034533	protein_coding	Scn10a	ENSMUST00000214408	protein_coding	principal2	9	-1	119694325	5877
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000123408	nonsense_mediated_decay		X	1	166344692	1313
ENSMUSG00000034533	protein_coding	Scn10a	ENSMUST00000216583	retained_intron		9	-1	119688039	2880
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000143263	nonsense_mediated_decay		X	1	166344692	1193
ENSMUSG00000005148	protein_coding	Klf5	ENSMUST00000005279	protein_coding	principal1	14	1	99298691	3352
ENSMUSG00000034533	protein_coding	Scn10a	ENSMUST00000213401	processed_transcript		9	-1	119718963	299
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000112223	protein_coding	alternative1	X	1	166344692	4764
ENSMUSG00000034533	protein_coding	Scn10a	ENSMUST00000084787	protein_coding	principal2	9	-1	119719032	6416
ENSMUSG00000005148	protein_coding	Klf5	ENSMUST00000226784	protein_coding		14	1	99299154	2852
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000112224	protein_coding	alternative1	X	1	166344692	4644
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000112229	protein_coding	alternative1	X	1	166344692	3203
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000112228	protein_coding	alternative1	X	1	166344692	3083
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000112227	protein_coding	alternative1	X	1	166344692	3294
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000112226	protein_coding	alternative1	X	1	166344692	3174
ENSMUSG00000031342	protein_coding	Gpm6b	ENSMUST00000129731	retained_intron		X	1	166344842	890
ENSMUSG00000072945	protein_coding	Ripply1	ENSMUST00000101217	protein_coding	principal1	X	-1	139782353	811
ENSMUSG00000115746	processed_pseudogene	Gm49218	ENSMUST00000227310	processed_pseudogene		14	-1	99366017	336
ENSMUSG00000081018	processed_pseudogene	Gm15012	ENSMUST00000119176	processed_pseudogene		X	-1	139795105	106
ENSMUSG00000047230	protein_coding	Cldn2	ENSMUST00000054889	protein_coding	principal1	X	1	139800828	3044
ENSMUSG00000047230	protein_coding	Cldn2	ENSMUST00000172779	protein_coding		X	1	139802787	290
ENSMUSG00000047230	protein_coding	Cldn2	ENSMUST00000135224	protein_coding		X	1	139806081	755
ENSMUSG00000115590	processed_pseudogene	Gm49219	ENSMUST00000226661	processed_pseudogene		14	1	99387439	340
ENSMUSG00000036561	protein_coding	Ppp6r2	ENSMUST00000227951	protein_coding		15	1	89211553	407
ENSMUSG00000115178	processed_pseudogene	Gm49220	ENSMUST00000227904	processed_pseudogene		14	1	99441657	1021
ENSMUSG00000115580	lincRNA	Gm41230	ENSMUST00000228876	lincRNA		14	1	99522545	965
ENSMUSG00000036561	protein_coding	Ppp6r2	ENSMUST00000226779	retained_intron		15	1	89211559	2072
ENSMUSG00000036561	protein_coding	Ppp6r2	ENSMUST00000226221	protein_coding		15	1	89211568	2559
ENSMUSG00000115550	lincRNA	Gm49225	ENSMUST00000226602	lincRNA		14	-1	99620016	747
ENSMUSG00000115366	processed_pseudogene	Gm9298	ENSMUST00000228944	processed_pseudogene		14	-1	99630666	911
ENSMUSG00000034115	protein_coding	Scn11a	ENSMUST00000215718	protein_coding	principal1	9	-1	119823860	5899
ENSMUSG00000034115	protein_coding	Scn11a	ENSMUST00000070617	protein_coding	principal1	9	-1	119825456	5837
ENSMUSG00000103188	TEC	Gm37093	ENSMUST00000192515	TEC		14	-1	99792773	407
ENSMUSG00000087144	processed_pseudogene	Gm5958	ENSMUST00000147698	processed_pseudogene		14	-1	99835814	297
ENSMUSG00000097223	bidirectional_promoter_lncRNA	Gm2449	ENSMUST00000214307	bidirectional_promoter_lncRNA		9	-1	119894845	440
ENSMUSG00000097223	bidirectional_promoter_lncRNA	Gm2449	ENSMUST00000180676	bidirectional_promoter_lncRNA		9	-1	119894863	585
ENSMUSG00000036561	protein_coding	Ppp6r2	ENSMUST00000238818	protein_coding	alternative2	15	1	89211601	3378
ENSMUSG00000036561	protein_coding	Ppp6r2	ENSMUST00000228284	protein_coding	principal2	15	1	89211601	3297
ENSMUSG00000036561	protein_coding	Ppp6r2	ENSMUST00000226875	retained_intron		15	1	89258946	2674
ENSMUSG00000036561	protein_coding	Ppp6r2	ENSMUST00000226967	retained_intron		15	1	89283291	2826
ENSMUSG00000036561	protein_coding	Ppp6r2	ENSMUST00000227011	retained_intron		15	1	89284424	2496
ENSMUSG00000036561	protein_coding	Ppp6r2	ENSMUST00000088788	protein_coding	principal2	15	1	89253035	2887
ENSMUSG00000072294	protein_coding	Klf12	ENSMUST00000228216	protein_coding	principal1	14	-1	100284679	5890
ENSMUSG00000072294	protein_coding	Klf12	ENSMUST00000228612	retained_intron		14	-1	99900391	1137
ENSMUSG00000072294	protein_coding	Klf12	ENSMUST00000226205	processed_transcript		14	-1	99943708	213
ENSMUSG00000072294	protein_coding	Klf12	ENSMUST00000226774	protein_coding		14	-1	100284484	719
ENSMUSG00000072294	protein_coding	Klf12	ENSMUST00000226544	processed_transcript		14	-1	100284528	832
ENSMUSG00000072294	protein_coding	Klf12	ENSMUST00000097079	protein_coding	principal1	14	-1	100149764	1856
ENSMUSG00000054391	antisense	4930517O19Rik	ENSMUST00000140320	antisense		14	1	100213142	603
ENSMUSG00000054391	antisense	4930517O19Rik	ENSMUST00000145018	antisense		14	1	100213189	571
ENSMUSG00000084991	processed_pseudogene	Gm16260	ENSMUST00000155141	processed_pseudogene		14	1	100219486	304
ENSMUSG00000079317	protein_coding	Trappc2	ENSMUST00000116495	protein_coding	principal1	X	1	166440574	1613
ENSMUSG00000079317	protein_coding	Trappc2	ENSMUST00000154573	retained_intron		X	1	166440776	2366
ENSMUSG00000079317	protein_coding	Trappc2	ENSMUST00000112192	protein_coding		X	1	166440776	1294
ENSMUSG00000079317	protein_coding	Trappc2	ENSMUST00000112194	protein_coding	principal1	X	1	166445303	1418
ENSMUSG00000116226	TEC	Gm49502	ENSMUST00000229390	TEC		15	1	82185516	2110
ENSMUSG00000040586	protein_coding	Ofd1	ENSMUST00000049501	protein_coding	principal1	X	-1	166440704	4453
ENSMUSG00000079316	protein_coding	Rab9	ENSMUST00000112091	protein_coding	principal1	X	-1	166479867	1447
ENSMUSG00000079316	protein_coding	Rab9	ENSMUST00000049435	protein_coding		X	-1	166479646	876
ENSMUSG00000079316	protein_coding	Rab9	ENSMUST00000149315	protein_coding		X	-1	166475435	392
ENSMUSG00000085880	processed_pseudogene	Gm15229	ENSMUST00000146636	processed_pseudogene		X	-1	166483617	1398
ENSMUSG00000081875	processed_pseudogene	Gm15223	ENSMUST00000120989	processed_pseudogene		X	1	166485602	826
ENSMUSG00000022463	protein_coding	Srebf2	ENSMUST00000023100	protein_coding	principal2	15	1	82147181	5077
ENSMUSG00000051224	protein_coding	Tceanc	ENSMUST00000112188	protein_coding	principal1	X	-1	166510478	4050
ENSMUSG00000051224	protein_coding	Tceanc	ENSMUST00000112187	protein_coding		X	-1	166518567	535
ENSMUSG00000051224	protein_coding	Tceanc	ENSMUST00000180322	protein_coding	principal1	X	-1	166503397	1080
ENSMUSG00000022463	protein_coding	Srebf2	ENSMUST00000229336	protein_coding	alternative2	15	1	82147204	4040
ENSMUSG00000022463	protein_coding	Srebf2	ENSMUST00000231065	retained_intron		15	1	82147246	2664
ENSMUSG00000022463	protein_coding	Srebf2	ENSMUST00000230105	retained_intron		15	1	82147251	1981
ENSMUSG00000022463	protein_coding	Srebf2	ENSMUST00000229009	protein_coding		15	1	82148013	748
ENSMUSG00000022463	protein_coding	Srebf2	ENSMUST00000229518	retained_intron		15	1	82148025	577
ENSMUSG00000022463	protein_coding	Srebf2	ENSMUST00000230955	protein_coding		15	1	82194972	740
ENSMUSG00000111089	lincRNA	Gm49427	ENSMUST00000215481	lincRNA		9	1	120009805	566
ENSMUSG00000000402	protein_coding	Egfl6	ENSMUST00000000412	protein_coding	principal1	X	-1	166585720	2704
ENSMUSG00000087677	lincRNA	Gm15226	ENSMUST00000156526	lincRNA		X	-1	166621542	2971
ENSMUSG00000086860	lincRNA	Gm1720	ENSMUST00000135086	lincRNA		X	1	166662025	1503
ENSMUSG00000067147	processed_pseudogene	Rpl7a-ps11	ENSMUST00000118791	processed_pseudogene		X	1	166854211	801
ENSMUSG00000084920	lincRNA	Gm15230	ENSMUST00000153701	lincRNA		X	-1	166864449	510
ENSMUSG00000082019	processed_pseudogene	Gm15231	ENSMUST00000119174	processed_pseudogene		X	1	166935469	447
ENSMUSG00000082360	processed_pseudogene	Gm8814	ENSMUST00000119072	processed_pseudogene		X	-1	167029436	535
ENSMUSG00000086008	lincRNA	Gm8817	ENSMUST00000126769	lincRNA		X	-1	167070380	693
ENSMUSG00000086008	lincRNA	Gm8817	ENSMUST00000133867	lincRNA		X	-1	167070380	666
ENSMUSG00000086008	lincRNA	Gm8817	ENSMUST00000171902	lincRNA		X	-1	167068389	303
ENSMUSG00000084806	lincRNA	Gm15232	ENSMUST00000146929	lincRNA		X	-1	167102090	2318
ENSMUSG00000087340	lincRNA	Gm15228	ENSMUST00000142044	lincRNA		X	1	167164097	3440
ENSMUSG00000032514	protein_coding	Ttc21a	ENSMUST00000035100	protein_coding	principal1	9	1	119937606	4182
ENSMUSG00000049775	protein_coding	Tmsb4x	ENSMUST00000112172	protein_coding	principal1	X	-1	167209315	768
ENSMUSG00000049775	protein_coding	Tmsb4x	ENSMUST00000112176	protein_coding		X	-1	167209149	698
ENSMUSG00000049775	protein_coding	Tmsb4x	ENSMUST00000112175	protein_coding		X	-1	167208827	864
ENSMUSG00000032514	protein_coding	Ttc21a	ENSMUST00000159128	retained_intron		9	1	119937635	4041
ENSMUSG00000032514	protein_coding	Ttc21a	ENSMUST00000160790	retained_intron		9	1	119937636	3326
ENSMUSG00000040522	protein_coding	Tlr8	ENSMUST00000112170	protein_coding	principal1	X	-1	167264286	3431
ENSMUSG00000032514	protein_coding	Ttc21a	ENSMUST00000161967	retained_intron		9	1	119961618	827
ENSMUSG00000111369	lincRNA	Gm47043	ENSMUST00000216943	lincRNA		9	1	120004037	570
ENSMUSG00000040522	protein_coding	Tlr8	ENSMUST00000148370	processed_transcript		X	-1	167264299	491
ENSMUSG00000111792	antisense	Gm33858	ENSMUST00000216918	antisense		9	1	120068996	1411
ENSMUSG00000040522	protein_coding	Tlr8	ENSMUST00000133722	protein_coding		X	-1	167264329	485
ENSMUSG00000040522	protein_coding	Tlr8	ENSMUST00000138311	processed_transcript		X	-1	167264284	387
ENSMUSG00000040522	protein_coding	Tlr8	ENSMUST00000049023	protein_coding	principal1	X	-1	167263788	3158
ENSMUSG00000044583	protein_coding	Tlr7	ENSMUST00000112161	protein_coding	principal1	X	-1	167330528	3897
ENSMUSG00000044583	protein_coding	Tlr7	ENSMUST00000060719	protein_coding	principal1	X	-1	167330558	3776
ENSMUSG00000044583	protein_coding	Tlr7	ENSMUST00000112164	protein_coding	principal1	X	-1	167330497	3468
ENSMUSG00000044583	protein_coding	Tlr7	ENSMUST00000145284	protein_coding		X	-1	167330491	366
ENSMUSG00000044583	protein_coding	Tlr7	ENSMUST00000137492	protein_coding		X	-1	167330510	384
ENSMUSG00000044583	protein_coding	Tlr7	ENSMUST00000149507	processed_transcript		X	-1	167330443	261
ENSMUSG00000086258	antisense	Gm15239	ENSMUST00000150690	antisense		X	1	167361455	603
ENSMUSG00000025742	protein_coding	Prps2	ENSMUST00000026839	protein_coding	principal1	X	-1	167382749	3699
ENSMUSG00000025742	protein_coding	Prps2	ENSMUST00000145456	processed_transcript		X	-1	167382710	599
ENSMUSG00000031434	protein_coding	Morc4	ENSMUST00000033811	protein_coding	principal3	X	-1	139871654	4412
ENSMUSG00000031434	protein_coding	Morc4	ENSMUST00000136415	protein_coding		X	-1	139854991	3046
ENSMUSG00000031434	protein_coding	Morc4	ENSMUST00000087401	protein_coding	alternative2	X	-1	139871677	3862
ENSMUSG00000031434	protein_coding	Morc4	ENSMUST00000172366	retained_intron		X	-1	139836103	755
ENSMUSG00000031434	protein_coding	Morc4	ENSMUST00000167664	protein_coding		X	-1	139854938	655
ENSMUSG00000031434	protein_coding	Morc4	ENSMUST00000144481	retained_intron		X	-1	139871625	2326
ENSMUSG00000031434	protein_coding	Morc4	ENSMUST00000113014	processed_transcript		X	-1	139871622	2195
ENSMUSG00000031434	protein_coding	Morc4	ENSMUST00000146914	retained_intron		X	-1	139871410	600
ENSMUSG00000031434	protein_coding	Morc4	ENSMUST00000171896	nonsense_mediated_decay		X	-1	139871373	456
ENSMUSG00000031434	protein_coding	Morc4	ENSMUST00000165274	protein_coding		X	-1	139871199	370
ENSMUSG00000032512	protein_coding	Wdr48	ENSMUST00000036561	protein_coding	principal1	9	1	119894878	3845
ENSMUSG00000032512	protein_coding	Wdr48	ENSMUST00000217472	protein_coding		9	1	119894895	2997
ENSMUSG00000032512	protein_coding	Wdr48	ENSMUST00000215307	protein_coding		9	1	119894906	3776
ENSMUSG00000032512	protein_coding	Wdr48	ENSMUST00000214716	processed_transcript		9	1	119895157	392
ENSMUSG00000032512	protein_coding	Wdr48	ENSMUST00000215167	protein_coding		9	1	119907713	656
ENSMUSG00000032512	protein_coding	Wdr48	ENSMUST00000213230	retained_intron		9	1	119912626	2924
ENSMUSG00000032512	protein_coding	Wdr48	ENSMUST00000217555	retained_intron		9	1	119913638	450
ENSMUSG00000032512	protein_coding	Wdr48	ENSMUST00000216349	retained_intron		9	1	119918131	601
ENSMUSG00000032512	protein_coding	Wdr48	ENSMUST00000217429	retained_intron		9	1	119920540	3487
ENSMUSG00000032512	protein_coding	Wdr48	ENSMUST00000217492	processed_transcript		9	1	119921298	388
ENSMUSG00000079243	protein_coding	Xirp1	ENSMUST00000111635	protein_coding	principal2	9	-1	120023598	5839
ENSMUSG00000079243	protein_coding	Xirp1	ENSMUST00000213113	protein_coding		9	-1	120018498	321
ENSMUSG00000079243	protein_coding	Xirp1	ENSMUST00000238557	protein_coding	alternative2	9	-1	120019815	5442
ENSMUSG00000104432	TEC	A430027C01Rik	ENSMUST00000194599	TEC		9	-1	72013019	1644
ENSMUSG00000098761	processed_pseudogene	Gm18821	ENSMUST00000184135	processed_pseudogene		9	1	71908843	709
ENSMUSG00000102143	TEC	Gm38057	ENSMUST00000195551	TEC		9	-1	71855203	3203
ENSMUSG00000102939	TEC	Gm38111	ENSMUST00000194817	TEC		9	-1	71899453	2741
ENSMUSG00000098915	processed_pseudogene	Rpl15-ps2	ENSMUST00000184247	processed_pseudogene		9	1	72060937	613
ENSMUSG00000032513	protein_coding	Gorasp1	ENSMUST00000035099	protein_coding	principal1	9	-1	119937565	3906
ENSMUSG00000099313	processed_pseudogene	Gm27152	ENSMUST00000183828	processed_pseudogene		9	1	71948879	99
ENSMUSG00000104078	TEC	Gm37023	ENSMUST00000192895	TEC		9	-1	72003803	2426
ENSMUSG00000032513	protein_coding	Gorasp1	ENSMUST00000214118	retained_intron		9	-1	119932852	434
ENSMUSG00000032513	protein_coding	Gorasp1	ENSMUST00000213409	retained_intron		9	-1	119937550	386
ENSMUSG00000052336	protein_coding	Cx3cr1	ENSMUST00000064165	protein_coding	principal1	9	-1	120068296	3753
ENSMUSG00000052336	protein_coding	Cx3cr1	ENSMUST00000215016	protein_coding	principal1	9	-1	120069879	4493
ENSMUSG00000052336	protein_coding	Cx3cr1	ENSMUST00000177637	protein_coding	principal1	9	-1	120068283	3156
ENSMUSG00000032515	protein_coding	Csrnp1	ENSMUST00000035101	protein_coding	principal1	9	-1	119984443	2906
ENSMUSG00000032515	protein_coding	Csrnp1	ENSMUST00000215916	protein_coding	principal1	9	-1	119977335	2956
ENSMUSG00000032515	protein_coding	Csrnp1	ENSMUST00000214058	protein_coding	principal1	9	-1	119983023	2241
ENSMUSG00000032515	protein_coding	Csrnp1	ENSMUST00000213936	protein_coding		9	-1	119984658	422
ENSMUSG00000032515	protein_coding	Csrnp1	ENSMUST00000216929	protein_coding		9	-1	119983779	465
ENSMUSG00000111639	antisense	1700019L13Rik	ENSMUST00000217388	antisense		9	1	119983146	1646
ENSMUSG00000111639	antisense	1700019L13Rik	ENSMUST00000214403	antisense		9	1	119983279	3816
ENSMUSG00000042262	protein_coding	Ccr8	ENSMUST00000048777	protein_coding	principal1	9	1	120092114	1175
ENSMUSG00000111546	TEC	Gm47050	ENSMUST00000217495	TEC		9	1	120095663	2176
ENSMUSG00000032519	protein_coding	Slc25a38	ENSMUST00000035106	protein_coding	principal1	9	1	120110374	1791
ENSMUSG00000032519	protein_coding	Slc25a38	ENSMUST00000150093	nonsense_mediated_decay		9	1	120110405	682
ENSMUSG00000032519	protein_coding	Slc25a38	ENSMUST00000139079	processed_transcript		9	1	120110408	420
ENSMUSG00000032519	protein_coding	Slc25a38	ENSMUST00000137522	processed_transcript		9	1	120110408	673
ENSMUSG00000032519	protein_coding	Slc25a38	ENSMUST00000144768	nonsense_mediated_decay		9	1	120110424	961
ENSMUSG00000032519	protein_coding	Slc25a38	ENSMUST00000135514	protein_coding		9	1	120114850	991
ENSMUSG00000032519	protein_coding	Slc25a38	ENSMUST00000154969	processed_transcript		9	1	120114989	492
ENSMUSG00000032518	protein_coding	Rpsa	ENSMUST00000035105	protein_coding	principal1	9	1	120127689	1938
ENSMUSG00000032518	protein_coding	Rpsa	ENSMUST00000217356	nonsense_mediated_decay		9	1	120127789	1101
ENSMUSG00000032518	protein_coding	Rpsa	ENSMUST00000216813	retained_intron		9	1	120127802	461
ENSMUSG00000032518	protein_coding	Rpsa	ENSMUST00000217317	protein_coding	principal1	9	1	120127844	1599
ENSMUSG00000032518	protein_coding	Rpsa	ENSMUST00000215568	retained_intron		9	1	120128806	728
ENSMUSG00000032518	protein_coding	Rpsa	ENSMUST00000217352	nonsense_mediated_decay		9	1	120130118	347
ENSMUSG00000111028	lincRNA	Gm5922	ENSMUST00000214963	lincRNA		9	-1	120136329	1723
ENSMUSG00000111028	lincRNA	Gm5922	ENSMUST00000216043	lincRNA		9	-1	120135015	327
ENSMUSG00000111498	lincRNA	Gm47059	ENSMUST00000213406	lincRNA		9	1	120259628	1304
ENSMUSG00000111498	lincRNA	Gm47059	ENSMUST00000217104	lincRNA		9	1	120260644	791
ENSMUSG00000111219	processed_transcript	Gm38642	ENSMUST00000216004	processed_transcript		9	1	120179038	691
ENSMUSG00000111360	lincRNA	Gm38642	ENSMUST00000215107	lincRNA		9	1	120193089	1512
ENSMUSG00000111360	lincRNA	Gm38642	ENSMUST00000216718	lincRNA		9	1	120236641	1148
ENSMUSG00000032517	protein_coding	Mobp	ENSMUST00000068698	protein_coding	principal3	9	1	120149707	1536
ENSMUSG00000032517	protein_coding	Mobp	ENSMUST00000215512	protein_coding		9	1	120149717	498
ENSMUSG00000032517	protein_coding	Mobp	ENSMUST00000111627	protein_coding	alternative2	9	1	120149742	481
ENSMUSG00000032517	protein_coding	Mobp	ENSMUST00000093773	protein_coding	alternative2	9	1	120149742	3286
ENSMUSG00000032517	protein_coding	Mobp	ENSMUST00000174193	nonsense_mediated_decay		9	1	120149742	2609
ENSMUSG00000032517	protein_coding	Mobp	ENSMUST00000214943	protein_coding	alternative2	9	1	120153045	435
ENSMUSG00000032517	protein_coding	Mobp	ENSMUST00000214008	retained_intron		9	1	120173029	569
ENSMUSG00000104494	TEC	Gm37111	ENSMUST00000193250	TEC		9	1	120182564	634
ENSMUSG00000082356	processed_pseudogene	Gm15565	ENSMUST00000118890	processed_pseudogene		9	1	120384911	427
ENSMUSG00000083772	processed_pseudogene	Gm15566	ENSMUST00000121130	processed_pseudogene		9	1	120316328	590
ENSMUSG00000041794	protein_coding	Myrip	ENSMUST00000133173	protein_coding		9	1	120301513	763
ENSMUSG00000041794	protein_coding	Myrip	ENSMUST00000048121	protein_coding	principal1	9	1	120303936	4906
ENSMUSG00000041794	protein_coding	Myrip	ENSMUST00000214784	protein_coding		9	1	120386309	1616
ENSMUSG00000041794	protein_coding	Myrip	ENSMUST00000139665	processed_transcript		9	1	120409883	400
ENSMUSG00000041794	protein_coding	Myrip	ENSMUST00000129168	processed_transcript		9	1	120427406	387
ENSMUSG00000111828	antisense	D830035M03Rik	ENSMUST00000213677	antisense		9	-1	120492547	1041
ENSMUSG00000006941	protein_coding	Eif1b	ENSMUST00000217553	protein_coding		9	1	120492232	458
ENSMUSG00000006941	protein_coding	Eif1b	ENSMUST00000007139	protein_coding	principal1	9	1	120492491	1035
ENSMUSG00000111816	unprocessed_pseudogene	Gm7229	ENSMUST00000214719	unprocessed_pseudogene		9	1	120521813	1007
ENSMUSG00000041608	protein_coding	Entpd3	ENSMUST00000047687	protein_coding	principal1	9	1	120539818	3453
ENSMUSG00000041608	protein_coding	Entpd3	ENSMUST00000143579	retained_intron		9	1	120558034	843
ENSMUSG00000025794	protein_coding	Rpl14	ENSMUST00000165532	protein_coding	principal1	9	1	120571444	1009
ENSMUSG00000025794	protein_coding	Rpl14	ENSMUST00000213310	retained_intron		9	1	120571514	1271
ENSMUSG00000025794	protein_coding	Rpl14	ENSMUST00000216628	processed_transcript		9	1	120571556	713
ENSMUSG00000025794	protein_coding	Rpl14	ENSMUST00000216990	nonsense_mediated_decay		9	1	120572095	598
ENSMUSG00000025794	protein_coding	Rpl14	ENSMUST00000215063	retained_intron		9	1	120573589	570
ENSMUSG00000052658	lincRNA	5830454E08Rik	ENSMUST00000213974	lincRNA		9	1	120577331	744
ENSMUSG00000052658	lincRNA	5830454E08Rik	ENSMUST00000064646	lincRNA		9	1	120577346	727
ENSMUSG00000110962	unprocessed_pseudogene	Gm47062	ENSMUST00000213466	unprocessed_pseudogene		9	1	120580135	1078
ENSMUSG00000110760	lincRNA	Gm39456	ENSMUST00000214759	lincRNA		9	-1	120620299	1019
ENSMUSG00000110760	lincRNA	Gm39456	ENSMUST00000216606	lincRNA		9	-1	120614748	354
ENSMUSG00000111533	processed_transcript	Gm39458	ENSMUST00000215086	lincRNA		9	1	120674405	935
ENSMUSG00000111533	processed_transcript	Gm39458	ENSMUST00000214671	retained_intron		9	1	120675536	736
ENSMUSG00000111679	TEC	Gm47063	ENSMUST00000213340	TEC		9	-1	120706237	349
ENSMUSG00000111831	lincRNA	Gm47064	ENSMUST00000215385	lincRNA		9	-1	120751143	790
ENSMUSG00000110726	processed_pseudogene	Gm18101	ENSMUST00000215769	processed_pseudogene		9	-1	120755526	548
ENSMUSG00000111270	lincRNA	Gm47066	ENSMUST00000216419	lincRNA		9	1	120791986	1219
ENSMUSG00000111270	lincRNA	Gm47066	ENSMUST00000216870	lincRNA		9	1	120791991	849
ENSMUSG00000111720	lincRNA	Gm39459	ENSMUST00000215662	lincRNA		9	1	120834363	1895
ENSMUSG00000110911	lincRNA	Gm47068	ENSMUST00000216237	lincRNA		9	-1	120846181	349
ENSMUSG00000111233	lincRNA	Gm47069	ENSMUST00000215206	lincRNA		9	1	120849207	757
ENSMUSG00000110730	lincRNA	Gm19385	ENSMUST00000214714	lincRNA		9	-1	120866756	1813
ENSMUSG00000111445	lincRNA	Gm47070	ENSMUST00000214083	lincRNA		9	-1	120871030	344
ENSMUSG00000111094	lincRNA	Gm34425	ENSMUST00000216269	lincRNA		9	1	120869160	3079
ENSMUSG00000111094	lincRNA	Gm34425	ENSMUST00000217259	lincRNA		9	1	120869946	1327
ENSMUSG00000111528	lincRNA	Gm39460	ENSMUST00000215728	lincRNA		9	-1	120881972	1266
ENSMUSG00000100146	lincRNA	1700020M21Rik	ENSMUST00000188320	lincRNA		9	-1	120915252	644
ENSMUSG00000086365	antisense	4930593C16Rik	ENSMUST00000140589	antisense		9	-1	120930804	588
ENSMUSG00000086365	antisense	4930593C16Rik	ENSMUST00000214011	antisense		9	-1	120930767	714
ENSMUSG00000091336	processed_pseudogene	Gm17157	ENSMUST00000172397	processed_pseudogene		9	1	121247317	348
ENSMUSG00000040936	protein_coding	Ulk4	ENSMUST00000213408	processed_transcript		9	-1	120960507	759
ENSMUSG00000040936	protein_coding	Ulk4	ENSMUST00000170406	processed_transcript		9	-1	121108525	2639
ENSMUSG00000040936	protein_coding	Ulk4	ENSMUST00000169176	retained_intron		9	-1	121044932	528
ENSMUSG00000040936	protein_coding	Ulk4	ENSMUST00000171923	protein_coding	principal2	9	-1	121277197	4103
ENSMUSG00000040936	protein_coding	Ulk4	ENSMUST00000171061	nonsense_mediated_decay		9	-1	121277170	3900
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000183404	protein_coding	principal3	9	-1	72111847	6299
ENSMUSG00000040936	protein_coding	Ulk4	ENSMUST00000051565	nonsense_mediated_decay		9	-1	121277181	4200
ENSMUSG00000040936	protein_coding	Ulk4	ENSMUST00000051479	protein_coding	alternative2	9	-1	121277172	3898
ENSMUSG00000040936	protein_coding	Ulk4	ENSMUST00000164336	retained_intron		9	-1	121277197	4629
ENSMUSG00000040936	protein_coding	Ulk4	ENSMUST00000170237	nonsense_mediated_decay		9	-1	121257408	1751
ENSMUSG00000040936	protein_coding	Ulk4	ENSMUST00000164969	processed_transcript		9	-1	121193057	546
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184770	retained_intron		9	-1	71896086	5742
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000034755	protein_coding	alternative1	9	-1	72111821	4621
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000183918	protein_coding		9	-1	71896396	4308
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000130466	protein_coding		9	1	120929216	364
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184867	nonsense_mediated_decay		9	-1	72111807	4167
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000185117	protein_coding	alternative1	9	-1	72111651	3986
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184783	protein_coding	principal3	9	-1	72111871	3489
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184448	protein_coding		9	-1	71896089	1522
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184523	protein_coding		9	-1	72111812	2257
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000183992	protein_coding		9	-1	72111202	1780
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000183784	processed_transcript		9	-1	71884711	932
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184378	nonsense_mediated_decay		9	-1	71895985	697
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184072	protein_coding		9	-1	72109724	838
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184416	nonsense_mediated_decay		9	-1	72000476	691
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000183647	nonsense_mediated_decay		9	-1	72000474	797
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000183492	protein_coding		9	-1	72111772	600
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184107	nonsense_mediated_decay		9	-1	72111600	826
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184029	protein_coding		9	-1	71922710	964
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000183594	nonsense_mediated_decay		9	-1	72111792	818
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184196	retained_intron		9	-1	72111847	2193
ENSMUSG00000032228	protein_coding	Tcf12	ENSMUST00000184806	retained_intron		9	-1	72110481	4343
ENSMUSG00000102874	TEC	Gm37137	ENSMUST00000195138	TEC		9	-1	72043235	2684
ENSMUSG00000104469	TEC	Gm37663	ENSMUST00000191887	TEC		9	-1	71991271	2299
ENSMUSG00000104107	TEC	Gm37879	ENSMUST00000193112	TEC		9	-1	71941585	1995
ENSMUSG00000081216	processed_pseudogene	Gm6744	ENSMUST00000119303	processed_pseudogene		X	-1	167446531	543
ENSMUSG00000082915	processed_pseudogene	Gm15240	ENSMUST00000118156	processed_pseudogene		X	1	167987505	720
ENSMUSG00000084378	processed_pseudogene	Gm15238	ENSMUST00000119938	processed_pseudogene		X	1	167776261	1296
ENSMUSG00000083611	processed_pseudogene	Gm8832	ENSMUST00000119890	processed_pseudogene		X	1	168366464	395
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000007130	protein_coding	principal1	9	1	120933400	3623
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000154356	nonsense_mediated_decay		9	1	120933475	3548
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000154687	retained_intron		9	1	120933486	2359
ENSMUSG00000049176	protein_coding	Frmpd4	ENSMUST00000238211	protein_coding		X	-1	167855077	8153
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000178812	protein_coding	principal1	9	1	120933572	2702
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000130845	nonsense_mediated_decay		9	1	120933623	795
ENSMUSG00000049176	protein_coding	Frmpd4	ENSMUST00000112147	nonsense_mediated_decay		X	-1	168577231	8607
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000145093	protein_coding		9	1	120933818	714
ENSMUSG00000049176	protein_coding	Frmpd4	ENSMUST00000112149	protein_coding	alternative2	X	-1	168123330	6330
ENSMUSG00000049176	protein_coding	Frmpd4	ENSMUST00000112146	protein_coding		X	-1	168122826	5283
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000163844	nonsense_mediated_decay		9	1	120950221	2222
ENSMUSG00000049176	protein_coding	Frmpd4	ENSMUST00000238709	protein_coding	principal5	X	-1	168448042	5337
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000170729	nonsense_mediated_decay		9	1	120951089	692
ENSMUSG00000049176	protein_coding	Frmpd4	ENSMUST00000239138	protein_coding		X	-1	168124290	4305
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000126633	retained_intron		9	1	120955125	494
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000156911	retained_intron		9	1	120955297	773
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000169931	protein_coding		9	1	120955457	505
ENSMUSG00000049176	protein_coding	Frmpd4	ENSMUST00000112145	protein_coding		X	-1	167897558	7924
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000133689	protein_coding		9	1	120955914	886
ENSMUSG00000084180	processed_pseudogene	Gm15237	ENSMUST00000122104	processed_pseudogene		X	1	168074454	469
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000139138	retained_intron		9	1	120956867	577
ENSMUSG00000006932	protein_coding	Ctnnb1	ENSMUST00000215573	retained_intron		9	1	120959216	1292
ENSMUSG00000084014	processed_pseudogene	Gm7209	ENSMUST00000122339	processed_pseudogene		X	1	168546009	333
ENSMUSG00000031358	protein_coding	Msl3	ENSMUST00000033725	protein_coding	principal1	X	-1	168673898	2399
ENSMUSG00000031358	protein_coding	Msl3	ENSMUST00000112137	protein_coding		X	-1	168673898	2316
ENSMUSG00000031358	protein_coding	Msl3	ENSMUST00000145564	retained_intron		X	-1	168659018	1336
ENSMUSG00000031358	protein_coding	Msl3	ENSMUST00000129860	retained_intron		X	-1	168672519	1390
ENSMUSG00000081500	processed_pseudogene	Gm15233	ENSMUST00000118747	processed_pseudogene		X	-1	168775256	400
ENSMUSG00000031354	protein_coding	Amelx	ENSMUST00000066112	protein_coding	principal4	X	-1	169187200	802
ENSMUSG00000031354	protein_coding	Amelx	ENSMUST00000112118	protein_coding	alternative2	X	-1	169187200	799
ENSMUSG00000031354	protein_coding	Amelx	ENSMUST00000112120	protein_coding		X	-1	169187200	727
ENSMUSG00000031354	protein_coding	Amelx	ENSMUST00000112119	protein_coding	alternative2	X	-1	169187200	841
ENSMUSG00000031354	protein_coding	Amelx	ENSMUST00000154923	processed_transcript		X	-1	169187200	436
ENSMUSG00000087201	antisense	Gm15261	ENSMUST00000136779	antisense		X	-1	169106536	2763
ENSMUSG00000031352	protein_coding	Hccs	ENSMUST00000154638	nonsense_mediated_decay		X	-1	169320372	3310
ENSMUSG00000031352	protein_coding	Hccs	ENSMUST00000033717	protein_coding	principal1	X	-1	169320280	2320
ENSMUSG00000031352	protein_coding	Hccs	ENSMUST00000112115	protein_coding	principal1	X	-1	169320294	2473
ENSMUSG00000031355	protein_coding	Arhgap6	ENSMUST00000033721	protein_coding	principal3	X	1	168795099	5510
ENSMUSG00000031355	protein_coding	Arhgap6	ENSMUST00000143048	retained_intron		X	1	169036611	5494
ENSMUSG00000031355	protein_coding	Arhgap6	ENSMUST00000087016	protein_coding		X	1	169036611	1310
ENSMUSG00000031355	protein_coding	Arhgap6	ENSMUST00000112129	protein_coding		X	1	169036611	2487
ENSMUSG00000031355	protein_coding	Arhgap6	ENSMUST00000139146	nonsense_mediated_decay		X	1	169036611	4192
ENSMUSG00000031355	protein_coding	Arhgap6	ENSMUST00000112131	protein_coding	alternative2	X	1	169036611	4053
ENSMUSG00000031355	protein_coding	Arhgap6	ENSMUST00000112127	protein_coding	alternative2	X	1	169113047	3973
ENSMUSG00000099253	processed_pseudogene	Gm7863	ENSMUST00000184700	processed_pseudogene		9	1	72128587	805
ENSMUSG00000081137	transcribed_processed_pseudogene	BC022960	ENSMUST00000119987	transcribed_processed_pseudogene		X	1	169368189	1815
ENSMUSG00000087159	processed_transcript	Gm15246	ENSMUST00000156210	processed_transcript		X	1	169320622	539
ENSMUSG00000087159	processed_transcript	Gm15246	ENSMUST00000149873	processed_transcript		X	1	169320622	540
ENSMUSG00000061390	processed_pseudogene	Uba52-ps	ENSMUST00000183770	processed_pseudogene		9	-1	72174958	379
ENSMUSG00000099020	lincRNA	Gm27159	ENSMUST00000185132	lincRNA		9	-1	72179758	432
ENSMUSG00000087587	lincRNA	Gm15245	ENSMUST00000129410	lincRNA		X	1	169447830	1186
ENSMUSG00000099190	lincRNA	Gm27188	ENSMUST00000184383	lincRNA		9	-1	72230306	510
ENSMUSG00000098412	processed_pseudogene	Gm7870	ENSMUST00000184467	processed_pseudogene		9	1	72209555	616
ENSMUSG00000098340	lincRNA	Gm27253	ENSMUST00000183670	lincRNA		9	-1	72274856	367
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000123791	protein_coding	principal3	15	-1	89315311	6190
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000144585	protein_coding	alternative2	15	-1	89315255	6165
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000124576	nonsense_mediated_decay		15	-1	89315271	6113
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000175778	protein_coding		15	-1	89294297	1586
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000176277	retained_intron		15	-1	89288959	317
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000177388	retained_intron		15	-1	89293810	598
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000124398	retained_intron		15	-1	89295651	796
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000150539	retained_intron		15	-1	89300460	425
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000155146	retained_intron		15	-1	89302630	924
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000124642	nonsense_mediated_decay		15	-1	89303334	676
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000176028	retained_intron		15	-1	89305095	759
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000147020	retained_intron		15	-1	89306617	958
ENSMUSG00000036529	protein_coding	Sbf1	ENSMUST00000146637	protein_coding		15	-1	89307800	773
ENSMUSG00000072844	processed_transcript	G530011O06Rik	ENSMUST00000154810	processed_transcript		X	-1	169978917	2380
ENSMUSG00000086695	antisense	Gm15247	ENSMUST00000124513	antisense		X	-1	169986939	403
ENSMUSG00000087263	antisense	Gm15726	ENSMUST00000144738	antisense		X	-1	169985232	509
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000112104	protein_coding	principal1	X	1	169685199	3860
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000036753	protein_coding	principal1	X	1	169828159	3753
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000078947	protein_coding		X	1	169879664	3591
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000149258	processed_transcript		X	1	169927475	1176
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000133857	processed_transcript		X	1	169972885	312
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000146073	processed_transcript		X	1	169972885	791
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000152163	processed_transcript		X	1	169975259	391
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000129642	processed_transcript		X	1	169975259	324
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000151722	processed_transcript		X	1	169975259	390
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000112107	protein_coding		X	1	169685199	3194
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000079443	protein_coding		X	1	169979451	2815
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000143815	processed_transcript		X	1	169975259	1011
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000171433	protein_coding	principal1	X	1	169926951	2546
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000163810	protein_coding	principal1	X	1	169926951	3689
ENSMUSG00000035299	protein_coding	Mid1	ENSMUST00000112105	protein_coding	principal1	X	1	169879622	3974
ENSMUSG00000055357	protein_coding	4933400A11Rik	ENSMUST00000068874	protein_coding	principal1	X	-1	169779635	1230
ENSMUSG00000055357	protein_coding	4933400A11Rik	ENSMUST00000112102	protein_coding	principal1	X	-1	169779557	1101
ENSMUSG00000055357	protein_coding	4933400A11Rik	ENSMUST00000068894	protein_coding	principal1	X	-1	169779592	1217
ENSMUSG00000095562	lincRNA	Erdr1	ENSMUST00000238681	lincRNA		X	1	170009694	583
ENSMUSG00000095562	lincRNA	Erdr1	ENSMUST00000180251	lincRNA		X	1	170009822	597
ENSMUSG00000095562	lincRNA	Erdr1	ENSMUST00000238482	lincRNA		X	1	170009995	1163
ENSMUSG00000095562	lincRNA	Erdr1	ENSMUST00000178789	lincRNA		X	1	170010744	441
ENSMUSG00000095562	lincRNA	Erdr1	ENSMUST00000179760	lincRNA		X	1	170009659	483
ENSMUSG00000093806	protein_coding	Asmt	ENSMUST00000178693	protein_coding	principal1	X	1	170672644	1191
ENSMUSG00000096661	processed_pseudogene	Gm15069	ENSMUST00000117792	processed_pseudogene		X	-1	170747207	192
ENSMUSG00000094276	processed_pseudogene	Gm15068	ENSMUST00000119796	processed_pseudogene		X	-1	170869960	192
ENSMUSG00000054136	protein_coding	Adm2	ENSMUST00000066991	protein_coding	principal1	15	1	89322720	1298
ENSMUSG00000098893	processed_pseudogene	Gm17828	ENSMUST00000183380	processed_pseudogene		9	-1	72293340	799
ENSMUSG00000103388	TEC	Gm37581	ENSMUST00000192371	TEC		9	1	72357227	988
ENSMUSG00000102925	TEC	Gm37150	ENSMUST00000193900	TEC		9	1	72384389	2754
ENSMUSG00000098801	lincRNA	Gm27255	ENSMUST00000184303	lincRNA		9	1	72409268	529
ENSMUSG00000098959	processed_transcript	Gm27230	ENSMUST00000184671	lincRNA		9	1	72395974	857
ENSMUSG00000098959	processed_transcript	Gm27230	ENSMUST00000184835	lincRNA		9	1	72395980	414
ENSMUSG00000098959	processed_transcript	Gm27230	ENSMUST00000184355	retained_intron		9	1	72403419	285
ENSMUSG00000098492	processed_pseudogene	Gm19353	ENSMUST00000184561	processed_pseudogene		9	1	72289667	445
ENSMUSG00000097211	antisense	BC065403	ENSMUST00000180997	antisense		9	-1	72409945	1022
ENSMUSG00000097211	antisense	BC065403	ENSMUST00000184796	antisense		9	-1	72409867	1043
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184036	protein_coding	alternative2	9	1	72274860	3459
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184517	protein_coding	alternative2	9	1	72274879	3919
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000098576	protein_coding	principal3	9	1	72274879	4387
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184399	nonsense_mediated_decay		9	1	72274906	2808
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184053	nonsense_mediated_decay		9	1	72274907	5910
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184968	processed_transcript		9	1	72274915	3062
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184639	processed_transcript		9	1	72274979	1767
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000183400	retained_intron		9	1	72274981	628
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000183410	protein_coding	alternative2	9	1	72275004	4200
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000183801	nonsense_mediated_decay		9	1	72295288	4990
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184786	nonsense_mediated_decay		9	1	72298727	1314
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000183545	retained_intron		9	1	72307147	2107
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000183608	processed_transcript		9	1	72312101	412
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000185020	nonsense_mediated_decay		9	1	72312141	920
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184248	retained_intron		9	1	72312663	763
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184025	retained_intron		9	1	72323056	473
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184141	retained_intron		9	1	72328248	2089
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000183459	retained_intron		9	1	72331081	3385
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184019	protein_coding		9	1	72331127	516
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000184216	protein_coding		9	1	72338748	1050
ENSMUSG00000038535	protein_coding	Zfp280d	ENSMUST00000183468	protein_coding		9	1	72360202	1834
ENSMUSG00000102225	TEC	Gm37983	ENSMUST00000193207	TEC		9	1	72315131	2006
ENSMUSG00000103133	TEC	Gm37303	ENSMUST00000194202	TEC		9	1	72355075	1559
ENSMUSG00000022613	protein_coding	Miox	ENSMUST00000023282	protein_coding	principal1	15	1	89334398	1130
ENSMUSG00000022613	protein_coding	Miox	ENSMUST00000159381	retained_intron		15	1	89334461	749
ENSMUSG00000022613	protein_coding	Miox	ENSMUST00000160491	retained_intron		15	1	89334640	1059
ENSMUSG00000022613	protein_coding	Miox	ENSMUST00000162756	retained_intron		15	1	89334930	661
ENSMUSG00000022613	protein_coding	Miox	ENSMUST00000161437	retained_intron		15	1	89334931	822
ENSMUSG00000022613	protein_coding	Miox	ENSMUST00000162033	protein_coding		15	1	89336433	392
ENSMUSG00000099019	processed_pseudogene	Gm27254	ENSMUST00000183926	processed_pseudogene		9	-1	72431643	517
ENSMUSG00000022614	protein_coding	Lmf2	ENSMUST00000023283	protein_coding	principal1	15	-1	89355659	2906
ENSMUSG00000022614	protein_coding	Lmf2	ENSMUST00000231067	retained_intron		15	-1	89355612	3262
ENSMUSG00000022614	protein_coding	Lmf2	ENSMUST00000231107	retained_intron		15	-1	89355147	3049
ENSMUSG00000022614	protein_coding	Lmf2	ENSMUST00000230112	retained_intron		15	-1	89355633	2815
ENSMUSG00000022614	protein_coding	Lmf2	ENSMUST00000229291	retained_intron		15	-1	89352163	556
ENSMUSG00000022614	protein_coding	Lmf2	ENSMUST00000230523	retained_intron		15	-1	89352929	663
ENSMUSG00000022614	protein_coding	Lmf2	ENSMUST00000229436	retained_intron		15	-1	89353858	308
ENSMUSG00000022614	protein_coding	Lmf2	ENSMUST00000229308	retained_intron		15	-1	89355615	691
ENSMUSG00000022614	protein_coding	Lmf2	ENSMUST00000229111	protein_coding		15	-1	89355574	370
ENSMUSG00000098778	antisense	Gm27231	ENSMUST00000185191	antisense		9	-1	72441779	551
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000184312	nonsense_mediated_decay		9	-1	72491956	2805
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000085358	protein_coding	alternative2	9	-1	72491956	3904
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000184125	protein_coding	principal2	9	-1	72492101	2794
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000183399	retained_intron		9	-1	72475263	2676
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000184831	protein_coding	alternative2	9	-1	72492212	1652
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000183574	protein_coding	alternative2	9	-1	72492101	1264
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000183856	nonsense_mediated_decay		9	-1	72492207	2054
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000184557	nonsense_mediated_decay		9	-1	72492101	1434
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000184066	retained_intron		9	-1	72491961	1496
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000184734	processed_transcript		9	-1	72480303	644
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000183428	nonsense_mediated_decay		9	-1	72488036	793
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000183551	retained_intron		9	-1	72478603	438
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000183501	protein_coding	alternative2	9	-1	72486795	475
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000185151	protein_coding		9	-1	72491939	726
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000185106	retained_intron		9	-1	72492089	969
ENSMUSG00000090626	protein_coding	Tex9	ENSMUST00000184624	retained_intron		9	-1	72491935	637
ENSMUSG00000103445	TEC	Gm36948	ENSMUST00000194708	TEC		9	1	72440760	3247
ENSMUSG00000032221	protein_coding	Mns1	ENSMUST00000183809	protein_coding		9	1	72438011	854
ENSMUSG00000032221	protein_coding	Mns1	ENSMUST00000184604	protein_coding		9	1	72438526	769
ENSMUSG00000032221	protein_coding	Mns1	ENSMUST00000034746	protein_coding	principal1	9	1	72438535	5250
ENSMUSG00000091780	protein_coding	Sco2	ENSMUST00000167643	protein_coding	principal1	15	-1	89373818	1145
ENSMUSG00000091780	protein_coding	Sco2	ENSMUST00000228977	protein_coding	principal1	15	-1	89373846	1250
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000036987	protein_coding	alternative2	15	1	89355719	3223
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000074552	protein_coding	principal3	15	1	89355736	3299
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000088717	protein_coding	alternative2	15	1	89355736	3302
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000145259	nonsense_mediated_decay		15	1	89355763	3255
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000141643	retained_intron		15	1	89355805	573
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000123889	retained_intron		15	1	89355821	488
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000145793	retained_intron		15	1	89355914	836
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000134900	retained_intron		15	1	89369692	869
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000147207	retained_intron		15	1	89369878	738
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000151523	retained_intron		15	1	89370033	647
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000136638	retained_intron		15	1	89370298	475
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000140665	retained_intron		15	1	89370647	618
ENSMUSG00000008690	protein_coding	Ncaph2	ENSMUST00000147733	retained_intron		15	1	89370753	644
ENSMUSG00000022615	protein_coding	Tymp	ENSMUST00000023285	protein_coding	principal1	15	-1	89377039	2037
ENSMUSG00000047394	protein_coding	Odf3b	ENSMUST00000227203	retained_intron		15	-1	89378226	636
ENSMUSG00000047394	protein_coding	Odf3b	ENSMUST00000049968	protein_coding	principal2	15	-1	89379254	1040
ENSMUSG00000047394	protein_coding	Odf3b	ENSMUST00000238996	protein_coding	alternative2	15	-1	89379587	873
ENSMUSG00000047394	protein_coding	Odf3b	ENSMUST00000227834	protein_coding		15	-1	89378925	930
ENSMUSG00000047394	protein_coding	Odf3b	ENSMUST00000228005	retained_intron		15	-1	89378989	896
ENSMUSG00000047394	protein_coding	Odf3b	ENSMUST00000226267	retained_intron		15	-1	89378862	675
ENSMUSG00000047394	protein_coding	Odf3b	ENSMUST00000227854	retained_intron		15	-1	89379003	1076
ENSMUSG00000047394	protein_coding	Odf3b	ENSMUST00000228111	protein_coding		15	-1	89379282	287
ENSMUSG00000091680	protein_coding	Klhdc7b	ENSMUST00000225666	protein_coding	alternative2	15	1	89384917	3951
ENSMUSG00000091680	protein_coding	Klhdc7b	ENSMUST00000166926	protein_coding	principal2	15	1	89386891	1818
ENSMUSG00000078938	protein_coding	Syce3	ENSMUST00000109314	protein_coding	principal1	15	-1	89410263	448
ENSMUSG00000078938	protein_coding	Syce3	ENSMUST00000167959	protein_coding	principal1	15	-1	89410503	480
ENSMUSG00000079242	bidirectional_promoter_lncRNA	C730034F03Rik	ENSMUST00000168646	bidirectional_promoter_lncRNA		15	1	89429589	1280
ENSMUSG00000078937	protein_coding	Cpt1b	ENSMUST00000109313	protein_coding	principal1	15	-1	89425863	2895
ENSMUSG00000078937	protein_coding	Cpt1b	ENSMUST00000168879	nonsense_mediated_decay		15	-1	89421401	840
ENSMUSG00000078937	protein_coding	Cpt1b	ENSMUST00000165419	retained_intron		15	-1	89424471	339
ENSMUSG00000078937	protein_coding	Cpt1b	ENSMUST00000168376	protein_coding		15	-1	89425795	629
ENSMUSG00000022617	protein_coding	Chkb	ENSMUST00000112664	processed_transcript		15	-1	89427161	469
ENSMUSG00000022617	protein_coding	Chkb	ENSMUST00000170334	retained_intron		15	-1	89429860	2063
ENSMUSG00000022617	protein_coding	Chkb	ENSMUST00000171140	retained_intron		15	-1	89429439	1416
ENSMUSG00000022617	protein_coding	Chkb	ENSMUST00000023289	protein_coding	principal1	15	-1	89429899	1707
ENSMUSG00000022617	protein_coding	Chkb	ENSMUST00000171666	nonsense_mediated_decay		15	-1	89428493	808
ENSMUSG00000022617	protein_coding	Chkb	ENSMUST00000115278	retained_intron		15	-1	89427159	543
ENSMUSG00000022617	protein_coding	Chkb	ENSMUST00000165623	retained_intron		15	-1	89429908	2455
ENSMUSG00000022617	protein_coding	Chkb	ENSMUST00000166267	retained_intron		15	-1	89429430	839
ENSMUSG00000022617	protein_coding	Chkb	ENSMUST00000170460	protein_coding		15	-1	89429093	529
ENSMUSG00000116461	protein_coding	Gm44502	ENSMUST00000052315	nonsense_mediated_decay	principal1	15	-1	89429696	4296
ENSMUSG00000096986	lincRNA	4930509E16Rik	ENSMUST00000181405	lincRNA		9	-1	72531858	1191
ENSMUSG00000099051	antisense	Gm27241	ENSMUST00000183517	antisense		9	-1	72616881	622
ENSMUSG00000099051	antisense	Gm27241	ENSMUST00000185013	antisense		9	-1	72617053	570
ENSMUSG00000099310	processed_pseudogene	Gm19427	ENSMUST00000183619	processed_pseudogene		9	1	72551728	208
ENSMUSG00000098573	antisense	Gm27232	ENSMUST00000184373	antisense		9	-1	72619520	597
ENSMUSG00000037674	protein_coding	Rfx7	ENSMUST00000163401	protein_coding	principal1	9	1	72532240	7880
ENSMUSG00000037674	protein_coding	Rfx7	ENSMUST00000184851	processed_transcript		9	1	72532243	5521
ENSMUSG00000037674	protein_coding	Rfx7	ENSMUST00000183372	protein_coding		9	1	72532609	1457
ENSMUSG00000037674	protein_coding	Rfx7	ENSMUST00000184015	protein_coding		9	1	72532735	1554
ENSMUSG00000037674	protein_coding	Rfx7	ENSMUST00000185177	retained_intron		9	1	72599598	2758
ENSMUSG00000037674	protein_coding	Rfx7	ENSMUST00000183601	retained_intron		9	1	72610389	2086
ENSMUSG00000037674	protein_coding	Rfx7	ENSMUST00000093820	protein_coding	principal1	9	1	72532240	7988
ENSMUSG00000102672	TEC	Gm37105	ENSMUST00000192251	TEC		9	1	72594923	2085
ENSMUSG00000098275	processed_pseudogene	Gm18014	ENSMUST00000183369	processed_pseudogene		9	-1	72607197	817
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000034740	protein_coding	principal1	9	1	72662346	5499
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000238368	nonsense_mediated_decay		9	1	72662346	5699
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000184737	retained_intron		9	1	72662438	1260
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000184450	protein_coding		9	1	72662482	3329
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000183375	protein_coding		9	1	72662487	660
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000184386	processed_transcript		9	1	72662490	312
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000184180	retained_intron		9	1	72668669	2348
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000184333	protein_coding		9	1	72668680	4034
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000238315	protein_coding		9	1	72693439	6035
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000184020	nonsense_mediated_decay		9	1	72739472	1368
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000183451	retained_intron		9	1	72741444	550
ENSMUSG00000032216	protein_coding	Nedd4	ENSMUST00000184287	retained_intron		9	1	72745839	779
ENSMUSG00000102573	TEC	Gm7265	ENSMUST00000192735	TEC		9	1	72691549	3502
ENSMUSG00000102411	TEC	Gm36936	ENSMUST00000194508	TEC		9	1	72728140	2749
ENSMUSG00000104273	TEC	A530064N14Rik	ENSMUST00000195338	TEC		9	1	72687224	1492
ENSMUSG00000104066	TEC	Gm37955	ENSMUST00000195098	TEC		9	1	72716960	212
ENSMUSG00000022619	protein_coding	Mapk8ip2	ENSMUST00000023291	protein_coding	principal1	15	1	89453913	5558
ENSMUSG00000022619	protein_coding	Mapk8ip2	ENSMUST00000137755	processed_transcript		15	1	89455042	382
ENSMUSG00000098294	lincRNA	Gm27204	ENSMUST00000184673	lincRNA		9	-1	72776225	527
ENSMUSG00000084915	antisense	C230037L18Rik	ENSMUST00000136218	antisense		15	1	89476236	1886
ENSMUSG00000084915	antisense	C230037L18Rik	ENSMUST00000166953	antisense		15	1	89476252	345
ENSMUSG00000084915	antisense	C230037L18Rik	ENSMUST00000168835	antisense		15	1	89477739	634
ENSMUSG00000022620	protein_coding	Arsa	ENSMUST00000165199	protein_coding	principal1	15	-1	89477425	3492
ENSMUSG00000022620	protein_coding	Arsa	ENSMUST00000023292	retained_intron		15	-1	89476113	2699
ENSMUSG00000022620	protein_coding	Arsa	ENSMUST00000168270	protein_coding		15	-1	89474271	704
ENSMUSG00000022620	protein_coding	Arsa	ENSMUST00000168052	processed_transcript		15	-1	89477411	585
ENSMUSG00000118456	lincRNA	Gm41381	ENSMUST00000238218	lincRNA		15	1	89497949	351
ENSMUSG00000102330	TEC	Gm37234	ENSMUST00000193259	TEC		9	1	72889045	1441
ENSMUSG00000036030	protein_coding	Prtg	ENSMUST00000055535	protein_coding	principal1	9	1	72806874	9148
ENSMUSG00000036030	protein_coding	Prtg	ENSMUST00000184274	retained_intron		9	1	72910627	517
ENSMUSG00000102971	TEC	A730062M13Rik	ENSMUST00000192843	TEC		9	1	72869652	1910
ENSMUSG00000098471	processed_pseudogene	Gm27203	ENSMUST00000183677	processed_pseudogene		9	-1	72827563	307
ENSMUSG00000034910	protein_coding	Pygo1	ENSMUST00000038489	protein_coding	principal1	9	1	72925645	7916
ENSMUSG00000098332	protein_coding	Pigbos1	ENSMUST00000184126	protein_coding	principal1	9	1	73039718	496
ENSMUSG00000098332	protein_coding	Pigbos1	ENSMUST00000184319	retained_intron		9	1	73039730	2639
ENSMUSG00000089865	protein_coding	Gm44503	ENSMUST00000149692	nonsense_mediated_decay	principal1	9	1	72958852	4383
ENSMUSG00000034563	protein_coding	Ccpg1	ENSMUST00000037977	protein_coding	principal3	9	1	72985429	3151
ENSMUSG00000034563	protein_coding	Ccpg1	ENSMUST00000156879	protein_coding		9	1	72985504	609
ENSMUSG00000034563	protein_coding	Ccpg1	ENSMUST00000150826	protein_coding	alternative2	9	1	72985578	2939
ENSMUSG00000034563	protein_coding	Ccpg1	ENSMUST00000183672	retained_intron		9	1	72985586	2475
ENSMUSG00000034563	protein_coding	Ccpg1	ENSMUST00000085350	protein_coding	alternative2	9	1	72985605	2969
ENSMUSG00000034563	protein_coding	Ccpg1	ENSMUST00000140675	protein_coding	alternative2	9	1	72985605	2839
ENSMUSG00000034563	protein_coding	Ccpg1	ENSMUST00000149551	retained_intron		9	1	72985608	664
ENSMUSG00000034563	protein_coding	Ccpg1	ENSMUST00000124008	nonsense_mediated_decay		9	1	72985619	2877
ENSMUSG00000034563	protein_coding	Ccpg1	ENSMUST00000131924	retained_intron		9	1	73009888	573
ENSMUSG00000034563	protein_coding	Ccpg1	ENSMUST00000138466	retained_intron		9	1	73014973	900
ENSMUSG00000102797	TEC	Gm37710	ENSMUST00000193501	TEC		9	-1	72973558	1274
ENSMUSG00000086158	protein_coding	Ccpg1os	ENSMUST00000124565	protein_coding	principal1	9	-1	72985376	711
ENSMUSG00000086158	protein_coding	Ccpg1os	ENSMUST00000184123	retained_intron		9	-1	72985382	1929
ENSMUSG00000079469	protein_coding	Pigb	ENSMUST00000183746	nonsense_mediated_decay		9	-1	73040378	6838
ENSMUSG00000079469	protein_coding	Pigb	ENSMUST00000184035	protein_coding	principal1	9	-1	73039699	3221
ENSMUSG00000079469	protein_coding	Pigb	ENSMUST00000184389	protein_coding	principal1	9	-1	73039651	2079
ENSMUSG00000079469	protein_coding	Pigb	ENSMUST00000184776	retained_intron		9	-1	73019204	1594
ENSMUSG00000079469	protein_coding	Pigb	ENSMUST00000183904	nonsense_mediated_decay		9	-1	73036775	664
ENSMUSG00000079469	protein_coding	Pigb	ENSMUST00000183587	retained_intron		9	-1	73032145	694
ENSMUSG00000079469	protein_coding	Pigb	ENSMUST00000185027	retained_intron		9	-1	73034757	1788
ENSMUSG00000079469	protein_coding	Pigb	ENSMUST00000098566	protein_coding	principal1	9	-1	73039699	2193
ENSMUSG00000079469	protein_coding	Pigb	ENSMUST00000093819	protein_coding		9	-1	73015657	2866
ENSMUSG00000102305	TEC	Gm38192	ENSMUST00000194364	TEC		9	1	73024293	1847
ENSMUSG00000092192	protein_coding	Dnaaf4	ENSMUST00000098567	protein_coding	alternative2	9	1	72958785	1612
ENSMUSG00000092192	protein_coding	Dnaaf4	ENSMUST00000034734	protein_coding	principal3	9	1	72958785	1975
ENSMUSG00000022623	protein_coding	Shank3	ENSMUST00000109309	protein_coding	principal1	15	1	89499623	7365
ENSMUSG00000022623	protein_coding	Shank3	ENSMUST00000135214	protein_coding		15	1	89500123	596
ENSMUSG00000022623	protein_coding	Shank3	ENSMUST00000066545	processed_transcript		15	1	89501283	4702
ENSMUSG00000022623	protein_coding	Shank3	ENSMUST00000230807	protein_coding		15	1	89523761	1337
ENSMUSG00000022623	protein_coding	Shank3	ENSMUST00000229559	nonsense_mediated_decay		15	1	89523761	4161
ENSMUSG00000022623	protein_coding	Shank3	ENSMUST00000154240	processed_transcript		15	1	89524322	899
ENSMUSG00000022623	protein_coding	Shank3	ENSMUST00000123799	processed_transcript		15	1	89530796	911
ENSMUSG00000022623	protein_coding	Shank3	ENSMUST00000167173	protein_coding		15	1	89532890	719
ENSMUSG00000022623	protein_coding	Shank3	ENSMUST00000039074	protein_coding		15	1	89547626	4812
ENSMUSG00000022623	protein_coding	Shank3	ENSMUST00000238458	protein_coding		15	1	89556702	2574
ENSMUSG00000086602	lincRNA	Gm15609	ENSMUST00000155610	lincRNA		15	-1	89523677	2960
ENSMUSG00000022622	protein_coding	Acr	ENSMUST00000023295	protein_coding	principal1	15	1	89568326	1504
ENSMUSG00000022622	protein_coding	Acr	ENSMUST00000231216	nonsense_mediated_decay		15	1	89568363	1373
ENSMUSG00000022622	protein_coding	Acr	ENSMUST00000230538	protein_coding		15	1	89568379	581
ENSMUSG00000022622	protein_coding	Acr	ENSMUST00000230978	protein_coding		15	1	89568383	780
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000023294	protein_coding	principal1	15	-1	89591923	1640
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000094056	protein_coding		15	-1	89591864	1322
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000165747	retained_intron		15	-1	89591865	1765
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000172053	nonsense_mediated_decay		15	-1	89590399	889
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000172074	retained_intron		15	-1	89584542	835
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000169466	nonsense_mediated_decay		15	-1	89591890	483
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000171580	nonsense_mediated_decay		15	-1	89591839	867
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000171826	protein_coding		15	-1	89584317	170
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000170126	nonsense_mediated_decay		15	-1	89591886	851
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000163376	retained_intron		15	-1	89591905	1032
ENSMUSG00000022621	protein_coding	Rabl2	ENSMUST00000171142	retained_intron		15	-1	89591876	536
ENSMUSG00000116149	processed_pseudogene	Gm18476	ENSMUST00000229546	processed_pseudogene		15	-1	89736517	557
ENSMUSG00000063260	protein_coding	Syt10	ENSMUST00000029441	protein_coding	principal1	15	-1	89841860	1845
ENSMUSG00000116231	lincRNA	Gm36330	ENSMUST00000230688	lincRNA		15	1	90074511	678
ENSMUSG00000075470	protein_coding	Alg10b	ENSMUST00000100309	protein_coding	principal1	15	1	90224311	6644
ENSMUSG00000075470	protein_coding	Alg10b	ENSMUST00000231200	protein_coding		15	1	90224349	6457
ENSMUSG00000116204	lincRNA	Gm36480	ENSMUST00000229899	lincRNA		15	1	90353706	1206
ENSMUSG00000032202	protein_coding	Rab27a	ENSMUST00000184146	protein_coding	principal1	9	1	73044854	3168
ENSMUSG00000032202	protein_coding	Rab27a	ENSMUST00000034722	protein_coding	principal1	9	1	73044857	2979
ENSMUSG00000032202	protein_coding	Rab27a	ENSMUST00000184575	retained_intron		9	1	73044984	679
ENSMUSG00000032202	protein_coding	Rab27a	ENSMUST00000184032	retained_intron		9	1	73094833	1583
ENSMUSG00000098468	processed_pseudogene	Gm27186	ENSMUST00000184223	processed_pseudogene		9	1	73060951	307
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000098971	protein_coding	alternative2	2	1	181319739	4307
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000146273	retained_intron		2	1	181319753	1966
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000139608	retained_intron		2	1	181319762	4448
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000054622	protein_coding	principal3	2	1	181319762	4401
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000108814	protein_coding	alternative2	2	1	181319785	4322
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000048608	protein_coding	alternative2	2	1	181319785	4135
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000108815	protein_coding	alternative2	2	1	181319785	4243
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000153112	protein_coding		2	1	181319963	719
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000148252	protein_coding		2	1	181328617	3505
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000184751	nonsense_mediated_decay		2	1	181335936	614
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000126842	retained_intron		2	1	181339111	485
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000125233	retained_intron		2	1	181349455	409
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000130935	retained_intron		2	1	181350018	825
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000144648	retained_intron		2	1	181350128	597
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000130772	retained_intron		2	1	181352082	1594
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000147266	processed_transcript		2	1	181354400	459
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000139601	retained_intron		2	1	181355203	606
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000124149	processed_transcript		2	1	181355694	712
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000133856	protein_coding		2	1	181355765	442
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000137700	protein_coding		2	1	181355970	482
ENSMUSG00000038685	protein_coding	Rtel1	ENSMUST00000134651	protein_coding		2	1	181355970	470
ENSMUSG00000110273	lincRNA	Gm41231	ENSMUST00000211525	lincRNA		14	1	100286165	449
ENSMUSG00000115821	lincRNA	6330576A10Rik	ENSMUST00000227740	lincRNA		14	1	100459423	1893
ENSMUSG00000115732	processed_pseudogene	Gm9302	ENSMUST00000228168	processed_pseudogene		14	-1	100520227	645
ENSMUSG00000115506	lincRNA	Gm49237	ENSMUST00000228938	lincRNA		14	1	100558632	707
ENSMUSG00000115105	TEC	Gm49238	ENSMUST00000227628	TEC		14	1	100655761	6773
ENSMUSG00000115721	processed_pseudogene	Gm49239	ENSMUST00000226241	processed_pseudogene		14	1	100812187	292
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000159386	protein_coding		9	1	61372383	4527
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000034820	protein_coding	alternative1	9	1	61372858	4646
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000162583	protein_coding	alternative1	9	1	61373219	4299
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000161993	protein_coding		9	1	61373381	1063
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000160882	protein_coding	principal4	9	1	61373385	3523
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000160724	protein_coding		9	1	61373416	729
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000162973	protein_coding	alternative1	9	1	61373417	4114
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000159050	protein_coding	alternative1	9	1	61373438	2304
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000160541	protein_coding		9	1	61373482	413
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000161207	protein_coding		9	1	61373514	2592
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000159630	protein_coding		9	1	61373535	4065
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000161689	protein_coding		9	1	61373672	2836
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000161194	protein_coding		9	1	61374329	388
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000162127	protein_coding		9	1	61375529	2369
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000162962	processed_transcript		9	1	61401859	855
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000159140	retained_intron		9	1	61402461	8638
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000162281	processed_transcript		9	1	61409937	633
ENSMUSG00000032280	protein_coding	Tle3	ENSMUST00000178113	protein_coding	alternative1	9	1	61372366	5205
ENSMUSG00000042888	protein_coding	Prr30	ENSMUST00000057718	protein_coding	principal1	14	-1	101200069	1862
ENSMUSG00000042888	protein_coding	Prr30	ENSMUST00000187304	protein_coding	principal1	14	-1	101200330	2104
ENSMUSG00000115538	processed_pseudogene	Hspd1-ps5	ENSMUST00000227762	processed_pseudogene		14	1	101343544	1689
ENSMUSG00000081374	processed_pseudogene	Gm15011	ENSMUST00000117724	processed_pseudogene		X	1	139892934	1480
ENSMUSG00000031433	protein_coding	Rbm41	ENSMUST00000113011	protein_coding	alternative2	X	-1	139998557	3728
ENSMUSG00000031433	protein_coding	Rbm41	ENSMUST00000113007	protein_coding		X	-1	139998542	3691
ENSMUSG00000031433	protein_coding	Rbm41	ENSMUST00000033810	protein_coding	principal3	X	-1	139998551	2787
ENSMUSG00000031433	protein_coding	Rbm41	ENSMUST00000138635	retained_intron		X	-1	139994082	1395
ENSMUSG00000031433	protein_coding	Rbm41	ENSMUST00000135126	processed_transcript		X	-1	139998536	726
ENSMUSG00000031433	protein_coding	Rbm41	ENSMUST00000148703	retained_intron		X	-1	139998566	1691
ENSMUSG00000031433	protein_coding	Rbm41	ENSMUST00000087400	protein_coding		X	-1	139998595	2229
ENSMUSG00000096883	protein_coding	Shisa8	ENSMUST00000179269	protein_coding	principal1	15	-1	82212815	2588
ENSMUSG00000096883	protein_coding	Shisa8	ENSMUST00000229543	protein_coding		15	-1	82209940	823
ENSMUSG00000068105	protein_coding	Tnfrsf13c	ENSMUST00000089161	protein_coding	principal2	15	-1	82224353	1924
ENSMUSG00000068105	protein_coding	Tnfrsf13c	ENSMUST00000109535	protein_coding		15	-1	82224339	1983
ENSMUSG00000068105	protein_coding	Tnfrsf13c	ENSMUST00000231049	protein_coding	alternative2	15	-1	82224369	627
ENSMUSG00000068105	protein_coding	Tnfrsf13c	ENSMUST00000229984	nonsense_mediated_decay		15	-1	82224302	471
ENSMUSG00000116009	lincRNA	Gm49503	ENSMUST00000230791	lincRNA		15	-1	82233531	653
ENSMUSG00000072944	protein_coding	Nup62cl	ENSMUST00000101212	protein_coding	principal1	X	-1	140062568	1996
ENSMUSG00000072944	protein_coding	Nup62cl	ENSMUST00000154385	protein_coding		X	-1	140062293	783
ENSMUSG00000072944	protein_coding	Nup62cl	ENSMUST00000133780	protein_coding		X	-1	140062712	712
ENSMUSG00000072944	protein_coding	Nup62cl	ENSMUST00000125678	protein_coding		X	-1	140062580	365
ENSMUSG00000072944	protein_coding	Nup62cl	ENSMUST00000124075	protein_coding		X	-1	140062551	418
ENSMUSG00000081761	processed_pseudogene	Gm6298	ENSMUST00000122262	processed_pseudogene		X	-1	140085460	981
ENSMUSG00000042433	protein_coding	Pih1h3b	ENSMUST00000044806	protein_coding	principal1	X	1	140062879	1509
ENSMUSG00000118593	unitary_pseudogene	AL928965.1	ENSMUST00000239235	unitary_pseudogene		2	1	181356922	272
ENSMUSG00000086441	lincRNA	Gm15046	ENSMUST00000130153	lincRNA		X	-1	140277862	408
ENSMUSG00000115319	processed_pseudogene	Gm34417	ENSMUST00000228293	processed_pseudogene		14	-1	101573014	487
ENSMUSG00000033083	protein_coding	Tbc1d4	ENSMUST00000161991	protein_coding	principal2	14	-1	101609033	6483
ENSMUSG00000033083	protein_coding	Tbc1d4	ENSMUST00000161304	retained_intron		14	-1	101463223	3823
ENSMUSG00000033083	protein_coding	Tbc1d4	ENSMUST00000159951	protein_coding		14	-1	101507326	5043
ENSMUSG00000033083	protein_coding	Tbc1d4	ENSMUST00000162617	protein_coding	alternative2	14	-1	101608486	4762
ENSMUSG00000033083	protein_coding	Tbc1d4	ENSMUST00000160297	retained_intron		14	-1	101608832	3103
ENSMUSG00000033083	protein_coding	Tbc1d4	ENSMUST00000159484	retained_intron		14	-1	101608667	2740
ENSMUSG00000033083	protein_coding	Tbc1d4	ENSMUST00000159668	retained_intron		14	-1	101608667	2713
ENSMUSG00000033083	protein_coding	Tbc1d4	ENSMUST00000159664	nonsense_mediated_decay		14	-1	101501108	1049
ENSMUSG00000033083	protein_coding	Tbc1d4	ENSMUST00000100340	protein_coding		14	-1	101609191	3249
ENSMUSG00000033083	protein_coding	Tbc1d4	ENSMUST00000160473	retained_intron		14	-1	101507270	674
ENSMUSG00000042425	protein_coding	Frmpd3	ENSMUST00000208130	protein_coding	principal1	X	1	140342263	7314
ENSMUSG00000042425	protein_coding	Frmpd3	ENSMUST00000141660	processed_transcript		X	1	140367494	776
ENSMUSG00000042425	protein_coding	Frmpd3	ENSMUST00000044702	retained_intron		X	1	140381971	3141
ENSMUSG00000068101	protein_coding	Cenpm	ENSMUST00000089157	protein_coding	principal1	15	-1	82244748	1202
ENSMUSG00000068101	protein_coding	Cenpm	ENSMUST00000089155	protein_coding		15	-1	82244727	789
ENSMUSG00000068101	protein_coding	Cenpm	ENSMUST00000230408	protein_coding		15	-1	82244410	593
ENSMUSG00000068101	protein_coding	Cenpm	ENSMUST00000229041	processed_transcript		15	-1	82244332	590
ENSMUSG00000068101	protein_coding	Cenpm	ENSMUST00000229505	processed_transcript		15	-1	82244673	381
ENSMUSG00000068101	protein_coding	Cenpm	ENSMUST00000229747	protein_coding		15	-1	82244337	286
ENSMUSG00000082031	processed_pseudogene	Gm8097	ENSMUST00000117903	processed_pseudogene		X	-1	140446382	829
ENSMUSG00000031432	protein_coding	Prps1	ENSMUST00000155235	processed_transcript		X	1	140456613	463
ENSMUSG00000031432	protein_coding	Prps1	ENSMUST00000033809	protein_coding	principal1	X	1	140456613	1965
ENSMUSG00000090077	protein_coding	Lime1	ENSMUST00000140943	protein_coding		2	1	181380078	565
ENSMUSG00000090077	protein_coding	Lime1	ENSMUST00000048077	protein_coding	principal1	2	1	181381235	1959
ENSMUSG00000090077	protein_coding	Lime1	ENSMUST00000184328	retained_intron		2	1	181381358	632
ENSMUSG00000090077	protein_coding	Lime1	ENSMUST00000126862	retained_intron		2	1	181381358	551
ENSMUSG00000090077	protein_coding	Lime1	ENSMUST00000126611	protein_coding		2	1	181381358	911
ENSMUSG00000090077	protein_coding	Lime1	ENSMUST00000108804	protein_coding		2	1	181381872	960
ENSMUSG00000090077	protein_coding	Lime1	ENSMUST00000126733	retained_intron		2	1	181382486	636
ENSMUSG00000027582	protein_coding	Zgpat	ENSMUST00000029105	protein_coding	principal1	2	1	181364928	2293
ENSMUSG00000027582	protein_coding	Zgpat	ENSMUST00000108807	protein_coding	principal1	2	1	181365405	2072
ENSMUSG00000027582	protein_coding	Zgpat	ENSMUST00000116366	nonsense_mediated_decay		2	1	181365423	3666
ENSMUSG00000027582	protein_coding	Zgpat	ENSMUST00000131284	retained_intron		2	1	181365452	4892
ENSMUSG00000027582	protein_coding	Zgpat	ENSMUST00000151457	retained_intron		2	1	181378394	679
ENSMUSG00000027582	protein_coding	Zgpat	ENSMUST00000156258	protein_coding		2	1	181379639	793
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000185118	nonsense_mediated_decay		2	-1	181365342	2318
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000127988	protein_coding	principal1	2	-1	181365404	2447
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000152334	retained_intron		2	-1	181360140	2179
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000108808	protein_coding	principal1	2	-1	181365351	1133
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000152580	retained_intron		2	-1	181365334	1822
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000048269	retained_intron		2	-1	181365320	1087
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000130346	retained_intron		2	-1	181364811	835
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000139368	retained_intron		2	-1	181365361	748
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000183499	nonsense_mediated_decay		2	-1	181365338	662
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000184859	processed_transcript		2	-1	181365267	434
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000145358	retained_intron		2	-1	181365351	555
ENSMUSG00000038671	protein_coding	Arfrp1	ENSMUST00000170190	protein_coding		2	-1	181365404	2483
ENSMUSG00000075486	protein_coding	Commd6	ENSMUST00000227868	retained_intron		14	-1	101640448	4907
ENSMUSG00000075486	protein_coding	Commd6	ENSMUST00000100339	protein_coding	principal3	14	-1	101640686	1090
ENSMUSG00000075486	protein_coding	Commd6	ENSMUST00000168587	protein_coding	alternative2	14	-1	101640457	519
ENSMUSG00000075486	protein_coding	Commd6	ENSMUST00000131022	retained_intron		14	-1	101640686	542
ENSMUSG00000068099	protein_coding	1500009C09Rik	ENSMUST00000136948	protein_coding	principal1	15	1	82252397	1526
ENSMUSG00000068099	protein_coding	1500009C09Rik	ENSMUST00000143238	protein_coding	principal1	15	1	82256023	1552
ENSMUSG00000118524	processed_pseudogene	AL683809.1	ENSMUST00000239013	processed_pseudogene		X	-1	140583599	171
ENSMUSG00000031431	protein_coding	Tsc22d3	ENSMUST00000112995	processed_transcript		X	-1	140542668	1790
ENSMUSG00000031431	protein_coding	Tsc22d3	ENSMUST00000055738	protein_coding	principal1	X	-1	140543187	1974
ENSMUSG00000031431	protein_coding	Tsc22d3	ENSMUST00000133023	retained_intron		X	-1	140543101	2876
ENSMUSG00000031431	protein_coding	Tsc22d3	ENSMUST00000112996	protein_coding		X	-1	140600659	1552
ENSMUSG00000031431	protein_coding	Tsc22d3	ENSMUST00000123898	protein_coding		X	-1	140548338	952
ENSMUSG00000031431	protein_coding	Tsc22d3	ENSMUST00000152048	processed_transcript		X	-1	140548529	643
ENSMUSG00000081408	processed_pseudogene	Gm15047	ENSMUST00000118891	processed_pseudogene		X	-1	140622136	454
ENSMUSG00000022111	protein_coding	Uchl3	ENSMUST00000227815	retained_intron		14	1	101653967	1270
ENSMUSG00000022111	protein_coding	Uchl3	ENSMUST00000002289	protein_coding	principal1	14	1	101653994	903
ENSMUSG00000022111	protein_coding	Uchl3	ENSMUST00000226521	retained_intron		14	1	101654016	401
ENSMUSG00000022111	protein_coding	Uchl3	ENSMUST00000228773	retained_intron		14	1	101654025	3270
ENSMUSG00000022111	protein_coding	Uchl3	ENSMUST00000226340	protein_coding		14	1	101665796	935
ENSMUSG00000115435	processed_pseudogene	Gm18075	ENSMUST00000228798	processed_pseudogene		14	-1	101703247	835
ENSMUSG00000115110	processed_pseudogene	Gm49269	ENSMUST00000227901	processed_pseudogene		14	1	101711434	172
ENSMUSG00000053821	bidirectional_promoter_lncRNA	Gm9922	ENSMUST00000238308	bidirectional_promoter_lncRNA		14	-1	101729815	2215
ENSMUSG00000053821	bidirectional_promoter_lncRNA	Gm9922	ENSMUST00000066461	bidirectional_promoter_lncRNA		14	-1	101729814	435
ENSMUSG00000000266	protein_coding	Mid2	ENSMUST00000112990	protein_coding	alternative2	X	1	140664956	6271
ENSMUSG00000000266	protein_coding	Mid2	ENSMUST00000112988	protein_coding	alternative1	X	1	140665072	2525
ENSMUSG00000000266	protein_coding	Mid2	ENSMUST00000140144	retained_intron		X	1	140748927	2069
ENSMUSG00000000266	protein_coding	Mid2	ENSMUST00000128809	protein_coding		X	1	140664599	757
ENSMUSG00000000266	protein_coding	Mid2	ENSMUST00000112993	protein_coding	principal2	X	1	140678028	5916
ENSMUSG00000085146	lincRNA	Eif2c5	ENSMUST00000125609	lincRNA		X	1	140776235	1416
ENSMUSG00000083646	processed_pseudogene	Gm6088	ENSMUST00000117257	processed_pseudogene		X	1	140797396	2539
ENSMUSG00000042386	protein_coding	Tex13b	ENSMUST00000044179	protein_coding	principal1	X	-1	140813433	2116
ENSMUSG00000042386	protein_coding	Tex13b	ENSMUST00000132970	retained_intron		X	-1	140810852	1292
ENSMUSG00000082165	processed_pseudogene	Gm7091	ENSMUST00000116438	processed_pseudogene		X	-1	140822523	586
ENSMUSG00000031430	protein_coding	Vsig1	ENSMUST00000033806	protein_coding	principal1	X	1	140907608	2707
ENSMUSG00000031430	protein_coding	Vsig1	ENSMUST00000127629	processed_transcript		X	1	140923189	1243
ENSMUSG00000111033	lincRNA	Gm34322	ENSMUST00000214224	lincRNA		9	1	61442591	719
ENSMUSG00000111635	processed_pseudogene	Gm47240	ENSMUST00000217096	processed_pseudogene		9	-1	61472986	396
ENSMUSG00000111381	transcribed_processed_pseudogene	Gm34424	ENSMUST00000214104	processed_transcript		9	1	61509723	1652
ENSMUSG00000111381	transcribed_processed_pseudogene	Gm34424	ENSMUST00000213400	transcribed_processed_pseudogene		9	1	61533415	782
ENSMUSG00000111739	processed_pseudogene	Gm47241	ENSMUST00000213572	processed_pseudogene		9	1	61763084	359
ENSMUSG00000110968	processed_pseudogene	Gm19208	ENSMUST00000213861	processed_pseudogene		9	1	61851704	912
ENSMUSG00000031429	protein_coding	Psmd10	ENSMUST00000033805	protein_coding	principal3	X	-1	140956689	1430
ENSMUSG00000031429	protein_coding	Psmd10	ENSMUST00000112978	protein_coding	alternative1	X	-1	140956728	1390
ENSMUSG00000085028	transcribed_unitary_pseudogene	Slc2a4rg-ps	ENSMUST00000127559	processed_transcript		2	1	181384250	2976
ENSMUSG00000085028	transcribed_unitary_pseudogene	Slc2a4rg-ps	ENSMUST00000176590	transcribed_unitary_pseudogene		2	1	181384411	1143
ENSMUSG00000007892	protein_coding	Rplp1	ENSMUST00000008036	protein_coding	principal1	9	-1	61914542	499
ENSMUSG00000027583	protein_coding	Zbtb46	ENSMUST00000029106	protein_coding	principal1	2	-1	181459426	5309
ENSMUSG00000027583	protein_coding	Zbtb46	ENSMUST00000087409	protein_coding		2	-1	181459426	2577
ENSMUSG00000027583	protein_coding	Zbtb46	ENSMUST00000146446	retained_intron		2	-1	181459426	3006
ENSMUSG00000027583	protein_coding	Zbtb46	ENSMUST00000155535	protein_coding		2	-1	181459379	468
ENSMUSG00000027583	protein_coding	Zbtb46	ENSMUST00000180222	protein_coding	principal1	2	-1	181424388	2014
ENSMUSG00000079418	protein_coding	Atg4a	ENSMUST00000112971	protein_coding	principal1	X	1	140956907	2202
ENSMUSG00000079418	protein_coding	Atg4a	ENSMUST00000153742	processed_transcript		X	1	140956950	340
ENSMUSG00000079418	protein_coding	Atg4a	ENSMUST00000147972	retained_intron		X	1	141162095	696
ENSMUSG00000055882	protein_coding	Abhd16b	ENSMUST00000069649	protein_coding	principal1	2	1	181493206	1775
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000213159	processed_transcript		9	-1	61921309	632
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000034815	protein_coding	principal1	9	-1	61946774	3398
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000215319	processed_transcript		9	-1	61921244	569
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000215743	retained_intron		9	-1	61921309	524
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000216812	processed_transcript		9	-1	61925121	392
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000216717	retained_intron		9	-1	61936776	2987
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000214940	retained_intron		9	-1	61925617	388
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000216746	retained_intron		9	-1	61926688	579
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000214295	protein_coding		9	-1	61946760	1829
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000213595	retained_intron		9	-1	61946736	1946
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000215965	retained_intron		9	-1	61932538	771
ENSMUSG00000032254	protein_coding	Kif23	ENSMUST00000215404	retained_intron		9	-1	61946737	2349
ENSMUSG00000022456	protein_coding	Septin3	ENSMUST00000238416	protein_coding	alternative2	15	1	82268802	6022
ENSMUSG00000022456	protein_coding	Septin3	ENSMUST00000239048	protein_coding	alternative2	15	1	82268802	6443
ENSMUSG00000022456	protein_coding	Septin3	ENSMUST00000116423	protein_coding	principal2	15	1	82274893	2397
ENSMUSG00000022456	protein_coding	Septin3	ENSMUST00000230418	protein_coding		15	1	82274993	440
ENSMUSG00000022456	protein_coding	Septin3	ENSMUST00000023095	protein_coding	principal2	15	1	82275239	4992
ENSMUSG00000022456	protein_coding	Septin3	ENSMUST00000230365	protein_coding	alternative2	15	1	82275276	1888
ENSMUSG00000022456	protein_coding	Septin3	ENSMUST00000229067	retained_intron		15	1	82275400	1882
ENSMUSG00000022456	protein_coding	Septin3	ENSMUST00000230799	retained_intron		15	1	82282533	2130
ENSMUSG00000022456	protein_coding	Septin3	ENSMUST00000230507	protein_coding		15	1	82284430	865
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000100337	protein_coding	principal1	14	1	101729957	6092
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159769	processed_transcript		14	1	101828968	372
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159258	nonsense_mediated_decay		14	1	101838512	6006
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000161668	processed_transcript		14	1	101840297	767
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000162091	retained_intron		14	1	101840507	2207
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159026	protein_coding		14	1	101840507	1986
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159314	protein_coding		14	1	101840648	5774
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159948	retained_intron		14	1	101840819	2692
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159812	processed_transcript		14	1	101869470	481
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159597	protein_coding		14	1	101876824	5423
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159806	protein_coding		14	1	101880841	3845
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000160876	retained_intron		14	1	101884087	664
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159797	retained_intron		14	1	101884119	1842
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159154	retained_intron		14	1	101919077	3330
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000159850	protein_coding		14	1	101926303	960
ENSMUSG00000033060	protein_coding	Lmo7	ENSMUST00000160038	processed_transcript		14	1	101929261	597
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000184588	nonsense_mediated_decay		2	1	181497142	587
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000183956	processed_transcript		2	1	181497164	620
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000149163	protein_coding		2	1	181497165	3603
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000000844	protein_coding		2	1	181497181	2950
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000184849	protein_coding		2	1	181497183	854
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000108800	protein_coding	alternative1	2	1	181497187	3475
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000069712	protein_coding	principal4	2	1	181497199	1799
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000129390	retained_intron		2	1	181497229	900
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000108799	protein_coding		2	1	181497231	985
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000141825	protein_coding		2	1	181499845	484
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000155589	retained_intron		2	1	181499866	549
ENSMUSG00000000827	protein_coding	Tpd52l2	ENSMUST00000130261	retained_intron		2	1	181512578	764
ENSMUSG00000032278	protein_coding	Paqr5	ENSMUST00000034817	protein_coding	principal2	9	-1	62026856	3566
ENSMUSG00000032278	protein_coding	Paqr5	ENSMUST00000113990	protein_coding	alternative1	9	-1	61976573	1073
ENSMUSG00000032278	protein_coding	Paqr5	ENSMUST00000135050	processed_transcript		9	-1	62026801	3307
ENSMUSG00000032252	protein_coding	Glce	ENSMUST00000185675	protein_coding	principal1	9	-1	62122610	4850
ENSMUSG00000032252	protein_coding	Glce	ENSMUST00000186514	retained_intron		9	-1	62070840	2097
ENSMUSG00000032252	protein_coding	Glce	ENSMUST00000185873	protein_coding		9	-1	62122655	317
ENSMUSG00000032252	protein_coding	Glce	ENSMUST00000185510	processed_transcript		9	-1	62122609	1922
ENSMUSG00000032252	protein_coding	Glce	ENSMUST00000034785	protein_coding	principal1	9	-1	62070606	4626
ENSMUSG00000022455	protein_coding	Wbp2nl	ENSMUST00000023089	protein_coding	principal1	15	1	82298954	1413
ENSMUSG00000110826	lincRNA	Gm47262	ENSMUST00000217557	lincRNA		9	1	62241670	403
ENSMUSG00000111232	lincRNA	A730043L09Rik	ENSMUST00000215490	lincRNA		9	-1	62244100	1205
ENSMUSG00000115584	processed_pseudogene	Gm5854	ENSMUST00000226515	processed_pseudogene		14	-1	101982763	773
ENSMUSG00000046846	protein_coding	Spesp1	ENSMUST00000056949	protein_coding	principal1	9	-1	62282208	3042
ENSMUSG00000115696	lincRNA	Gm49292	ENSMUST00000228104	lincRNA		14	1	102437023	700
ENSMUSG00000111193	lincRNA	Gm35288	ENSMUST00000216565	lincRNA		9	1	62298502	2731
ENSMUSG00000115816	processed_transcript	Gm34589	ENSMUST00000227348	lincRNA		14	-1	102834758	2927
ENSMUSG00000115816	processed_transcript	Gm34589	ENSMUST00000227101	retained_intron		14	-1	102828128	2979
ENSMUSG00000083710	processed_pseudogene	Gm15078	ENSMUST00000118371	processed_pseudogene		X	1	141356178	782
ENSMUSG00000082223	processed_pseudogene	Gm15079	ENSMUST00000121943	processed_pseudogene		X	1	141434973	216
ENSMUSG00000081029	processed_pseudogene	Gm15077	ENSMUST00000122344	processed_pseudogene		X	-1	141302710	362
ENSMUSG00000031273	protein_coding	Col4a6	ENSMUST00000101205	protein_coding	principal1	X	-1	141474076	6648
ENSMUSG00000031273	protein_coding	Col4a6	ENSMUST00000137051	processed_transcript		X	-1	141207602	3092
ENSMUSG00000031273	protein_coding	Col4a6	ENSMUST00000151459	retained_intron		X	-1	141192629	845
ENSMUSG00000098557	protein_coding	Kctd12	ENSMUST00000184744	protein_coding	principal1	14	-1	102982637	6057
ENSMUSG00000098557	protein_coding	Kctd12	ENSMUST00000183756	processed_transcript		14	-1	102981551	539
ENSMUSG00000114980	lincRNA	4933432I03Rik	ENSMUST00000226662	lincRNA		14	-1	103033803	1061
ENSMUSG00000115512	processed_pseudogene	Rpl17-ps7	ENSMUST00000227837	processed_pseudogene		14	1	103010246	541
ENSMUSG00000115855	lincRNA	Gm34643	ENSMUST00000230389	lincRNA		14	1	103012908	2289
ENSMUSG00000022126	protein_coding	Acod1	ENSMUST00000022722	protein_coding	principal1	14	1	103046977	2623
ENSMUSG00000000826	protein_coding	Dnajc5	ENSMUST00000072334	protein_coding	principal1	2	1	181520485	6578
ENSMUSG00000000826	protein_coding	Dnajc5	ENSMUST00000116365	nonsense_mediated_decay		2	1	181520526	3728
ENSMUSG00000000826	protein_coding	Dnajc5	ENSMUST00000108797	protein_coding	principal1	2	1	181520551	3664
ENSMUSG00000000826	protein_coding	Dnajc5	ENSMUST00000152578	protein_coding		2	1	181520812	609
ENSMUSG00000000826	protein_coding	Dnajc5	ENSMUST00000108796	protein_coding	principal1	2	1	181520947	934
ENSMUSG00000000826	protein_coding	Dnajc5	ENSMUST00000141523	processed_transcript		2	1	181549326	787
ENSMUSG00000032249	protein_coding	Anp32a	ENSMUST00000135395	protein_coding	alternative2	9	1	62342075	924
ENSMUSG00000032249	protein_coding	Anp32a	ENSMUST00000156461	protein_coding		9	1	62342464	412
ENSMUSG00000032249	protein_coding	Anp32a	ENSMUST00000136603	processed_transcript		9	1	62366938	871
ENSMUSG00000032249	protein_coding	Anp32a	ENSMUST00000126451	processed_transcript		9	1	62344799	617
ENSMUSG00000032249	protein_coding	Anp32a	ENSMUST00000129026	processed_transcript		9	1	62366944	630
ENSMUSG00000032249	protein_coding	Anp32a	ENSMUST00000141277	processed_transcript		9	1	62344063	535
ENSMUSG00000032249	protein_coding	Anp32a	ENSMUST00000145679	retained_intron		9	1	62373439	629
ENSMUSG00000032249	protein_coding	Anp32a	ENSMUST00000085519	protein_coding	principal2	9	1	62341329	2113
ENSMUSG00000032249	protein_coding	Anp32a	ENSMUST00000128636	protein_coding		9	1	62341902	640
ENSMUSG00000032249	protein_coding	Anp32a	ENSMUST00000138226	processed_transcript		9	1	62341293	835
ENSMUSG00000022125	protein_coding	Cln5	ENSMUST00000022721	protein_coding	principal1	14	1	103070216	2445
ENSMUSG00000022125	protein_coding	Cln5	ENSMUST00000227117	nonsense_mediated_decay		14	1	103071730	298
ENSMUSG00000022124	protein_coding	Fbxl3	ENSMUST00000022720	protein_coding	principal1	14	-1	103099554	4309
ENSMUSG00000022124	protein_coding	Fbxl3	ENSMUST00000145693	protein_coding	principal1	14	-1	103098999	3352
ENSMUSG00000022124	protein_coding	Fbxl3	ENSMUST00000132004	protein_coding		14	-1	103098975	2534
ENSMUSG00000022124	protein_coding	Fbxl3	ENSMUST00000127113	retained_intron		14	-1	103089817	922
ENSMUSG00000022124	protein_coding	Fbxl3	ENSMUST00000226952	processed_transcript		14	-1	103099506	668
ENSMUSG00000022124	protein_coding	Fbxl3	ENSMUST00000144141	protein_coding		14	-1	103099566	743
ENSMUSG00000022124	protein_coding	Fbxl3	ENSMUST00000123043	protein_coding		14	-1	103095748	557
ENSMUSG00000022453	protein_coding	Naga	ENSMUST00000023088	protein_coding	principal1	15	-1	82338826	1913
ENSMUSG00000022453	protein_coding	Naga	ENSMUST00000229733	protein_coding		15	-1	82338880	500
ENSMUSG00000022453	protein_coding	Naga	ENSMUST00000230268	retained_intron		15	-1	82330922	789
ENSMUSG00000022453	protein_coding	Naga	ENSMUST00000230664	retained_intron		15	-1	82332685	804
ENSMUSG00000022453	protein_coding	Naga	ENSMUST00000230139	nonsense_mediated_decay		15	-1	82335965	548
ENSMUSG00000022453	protein_coding	Naga	ENSMUST00000230380	protein_coding		15	-1	82338782	1020
ENSMUSG00000022453	protein_coding	Naga	ENSMUST00000229294	protein_coding		15	-1	82338336	816
ENSMUSG00000022453	protein_coding	Naga	ENSMUST00000229948	nonsense_mediated_decay		15	-1	82338807	704
ENSMUSG00000022453	protein_coding	Naga	ENSMUST00000229388	protein_coding		15	-1	82338925	833
ENSMUSG00000022453	protein_coding	Naga	ENSMUST00000230269	protein_coding		15	-1	82338460	403
ENSMUSG00000041729	protein_coding	Coro2b	ENSMUST00000048043	protein_coding	principal1	9	-1	62537044	3610
ENSMUSG00000041729	protein_coding	Coro2b	ENSMUST00000131981	protein_coding		9	-1	62428001	618
ENSMUSG00000041729	protein_coding	Coro2b	ENSMUST00000164246	protein_coding		9	-1	62510498	987
ENSMUSG00000041729	protein_coding	Coro2b	ENSMUST00000151604	retained_intron		9	-1	62429250	816
ENSMUSG00000041729	protein_coding	Coro2b	ENSMUST00000174439	protein_coding		9	-1	62449148	393
ENSMUSG00000041729	protein_coding	Coro2b	ENSMUST00000173171	protein_coding		9	-1	62520436	396
ENSMUSG00000041729	protein_coding	Coro2b	ENSMUST00000123379	retained_intron		9	-1	62536960	1872
ENSMUSG00000081803	processed_pseudogene	Gm15282	ENSMUST00000117707	processed_pseudogene		X	-1	141680741	300
ENSMUSG00000031274	protein_coding	Col4a5	ENSMUST00000112931	protein_coding	principal1	X	1	141475385	6536
ENSMUSG00000031274	protein_coding	Col4a5	ENSMUST00000112930	protein_coding	principal1	X	1	141475410	6285
ENSMUSG00000031274	protein_coding	Col4a5	ENSMUST00000130732	protein_coding		X	1	141630124	3511
ENSMUSG00000031274	protein_coding	Col4a5	ENSMUST00000128669	processed_transcript		X	1	141658350	728
ENSMUSG00000081217	processed_pseudogene	Gm15268	ENSMUST00000118845	processed_pseudogene		X	1	141627959	352
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000134340	protein_coding		2	-1	181570387	757
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000057816	protein_coding	principal1	2	-1	181582008	1849
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000136997	retained_intron		2	-1	181569797	569
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000129469	nonsense_mediated_decay		2	-1	181581972	1782
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000156308	retained_intron		2	-1	181569881	569
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000138408	retained_intron		2	-1	181572540	877
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000154613	nonsense_mediated_decay		2	-1	181573127	537
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000155182	retained_intron		2	-1	181573127	689
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000124315	retained_intron		2	-1	181571375	1196
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000149332	retained_intron		2	-1	181573136	518
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000156998	processed_transcript		2	-1	181574476	637
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000142296	processed_transcript		2	-1	181572158	797
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000142491	retained_intron		2	-1	181574500	618
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000144856	protein_coding		2	-1	181584892	760
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000130893	retained_intron		2	-1	181574834	645
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000136875	protein_coding		2	-1	181578952	1043
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000146823	retained_intron		2	-1	181581978	676
ENSMUSG00000089917	protein_coding	Uckl1	ENSMUST00000131949	protein_coding		2	-1	181581626	507
ENSMUSG00000010492	antisense	Uckl1os	ENSMUST00000152365	antisense		2	1	181578480	442
ENSMUSG00000010492	antisense	Uckl1os	ENSMUST00000123110	antisense		2	1	181578485	569
ENSMUSG00000010492	antisense	Uckl1os	ENSMUST00000148847	antisense		2	1	181578518	509
ENSMUSG00000010492	antisense	Uckl1os	ENSMUST00000126672	antisense		2	1	181579489	876
ENSMUSG00000010492	antisense	Uckl1os	ENSMUST00000122831	antisense		2	1	181579532	2018
ENSMUSG00000010492	antisense	Uckl1os	ENSMUST00000148004	antisense		2	1	181579598	822
ENSMUSG00000010492	antisense	Uckl1os	ENSMUST00000136759	antisense		2	1	181582241	312
ENSMUSG00000000823	protein_coding	Zfp512b	ENSMUST00000108789	protein_coding	principal1	2	-1	181592803	5714
ENSMUSG00000000823	protein_coding	Zfp512b	ENSMUST00000128553	protein_coding		2	-1	181590920	5357
ENSMUSG00000000823	protein_coding	Zfp512b	ENSMUST00000155947	retained_intron		2	-1	181586403	688
ENSMUSG00000000823	protein_coding	Zfp512b	ENSMUST00000135561	protein_coding		2	-1	181586309	449
ENSMUSG00000000823	protein_coding	Zfp512b	ENSMUST00000140103	protein_coding		2	-1	181586361	651
ENSMUSG00000000823	protein_coding	Zfp512b	ENSMUST00000150552	retained_intron		2	-1	181587646	700
ENSMUSG00000000823	protein_coding	Zfp512b	ENSMUST00000132538	nonsense_mediated_decay		2	-1	181588740	723
ENSMUSG00000000823	protein_coding	Zfp512b	ENSMUST00000131866	processed_transcript		2	-1	181589287	713
ENSMUSG00000000823	protein_coding	Zfp512b	ENSMUST00000133598	processed_transcript		2	-1	181592758	629
ENSMUSG00000000823	protein_coding	Zfp512b	ENSMUST00000153998	protein_coding		2	-1	181592803	606
ENSMUSG00000002455	protein_coding	Prpf6	ENSMUST00000132714	protein_coding		2	1	181591868	359
ENSMUSG00000002455	protein_coding	Prpf6	ENSMUST00000136481	protein_coding	principal1	2	1	181601316	3048
ENSMUSG00000002455	protein_coding	Prpf6	ENSMUST00000139955	retained_intron		2	1	181601373	2446
ENSMUSG00000002455	protein_coding	Prpf6	ENSMUST00000002529	protein_coding	principal1	2	1	181601319	3054
ENSMUSG00000038605	protein_coding	Samd10	ENSMUST00000060173	protein_coding	principal1	2	-1	181599212	2164
ENSMUSG00000038605	protein_coding	Samd10	ENSMUST00000183836	nonsense_mediated_decay		2	-1	181599198	2131
ENSMUSG00000038605	protein_coding	Samd10	ENSMUST00000136249	retained_intron		2	-1	181597606	731
ENSMUSG00000086426	antisense	Gm15295	ENSMUST00000139874	antisense		X	1	141724838	488
ENSMUSG00000054667	protein_coding	Irs4	ENSMUST00000067841	protein_coding	principal1	X	-1	141725263	6294
ENSMUSG00000083741	processed_pseudogene	Gm15297	ENSMUST00000117795	processed_pseudogene		X	1	141777180	290
ENSMUSG00000085466	processed_pseudogene	Hmgn2l6	ENSMUST00000115986	processed_pseudogene		X	-1	141870401	267
ENSMUSG00000049687	protein_coding	Pheta2	ENSMUST00000159942	processed_transcript		15	1	82338942	345
ENSMUSG00000049687	protein_coding	Pheta2	ENSMUST00000162983	processed_transcript		15	1	82340553	358
ENSMUSG00000049687	protein_coding	Pheta2	ENSMUST00000161178	protein_coding	principal1	15	1	82340858	2931
ENSMUSG00000049687	protein_coding	Pheta2	ENSMUST00000050349	protein_coding	principal1	15	1	82341179	2745
ENSMUSG00000022452	protein_coding	Smdt1	ENSMUST00000160994	protein_coding		15	1	82338959	485
ENSMUSG00000022452	protein_coding	Smdt1	ENSMUST00000162705	processed_transcript		15	1	82340986	424
ENSMUSG00000022452	protein_coding	Smdt1	ENSMUST00000023086	protein_coding	principal1	15	1	82345954	705
ENSMUSG00000022452	protein_coding	Smdt1	ENSMUST00000161892	nonsense_mediated_decay		15	1	82346014	597
ENSMUSG00000022452	protein_coding	Smdt1	ENSMUST00000230165	retained_intron		15	1	82346077	736
ENSMUSG00000022452	protein_coding	Smdt1	ENSMUST00000159054	protein_coding		15	1	82347220	294
ENSMUSG00000081607	protein_coding	Gm15294	ENSMUST00000118177	translated_processed_pseudogene		X	-1	141875235	977
ENSMUSG00000081607	protein_coding	Gm15294	ENSMUST00000182079	protein_coding	principal1	X	-1	141874870	366
ENSMUSG00000079024	protein_coding	Gm21961	ENSMUST00000110100	protein_coding	principal1	15	-1	65014904	114
ENSMUSG00000079546	protein_coding	Gm11146	ENSMUST00000114231	protein_coding	principal1	16	-1	77602094	96
ENSMUSG00000069136	pseudogene	A130006I12Rik	ENSMUST00000091396	pseudogene		2	-1	22895736	408
ENSMUSG00000079834	protein_coding	Tmlhe	ENSMUST00000115964	protein_coding		GL456233.1	1	159647	2251
ENSMUSG00000048316	pseudogene	Gm9823	ENSMUST00000051212	pseudogene		2	-1	29738665	327
ENSMUSG00000079175	protein_coding	Gm11060	ENSMUST00000111107	protein_coding	principal1	2	1	105092018	72
ENSMUSG00000095035	miRNA	Gm22346	ENSMUST00000116918	miRNA		17	-1	87184225	121
ENSMUSG00000098601	snRNA	Gm27297	ENSMUST00000183395	snRNA		12	-1	79108062	105
ENSMUSG00000064982	snRNA	Gm25259	ENSMUST00000083048	snRNA		7	-1	30356924	193
ENSMUSG00000088307	snoRNA	Gm24505	ENSMUST00000157682	snoRNA		7	1	35217235	126
ENSMUSG00000065820	snRNA	Gm26316	ENSMUST00000083886	snRNA		11	1	101604850	191
ENSMUSG00000080331	miRNA	Mir1298	ENSMUST00000116681	miRNA		X	1	147064905	98
ENSMUSG00000064647	snoRNA	Gm23301	ENSMUST00000082713	snoRNA		18	1	75001455	65
ENSMUSG00000105371	miRNA	Gm44384	ENSMUST00000200208	miRNA		3	1	109055634	114
ENSMUSG00000064995	snoRNA	Gm26003	ENSMUST00000083061	snoRNA		2	-1	158358472	113
ENSMUSG00000065922	rRNA	n-R5-8s1	ENSMUST00000083988	rRNA		18	-1	73533550	148
ENSMUSG00000088340	snoRNA	Gm22338	ENSMUST00000157715	snoRNA		2	1	61492766	129
ENSMUSG00000092822	miRNA	Gm23162	ENSMUST00000175081	miRNA		4	-1	13622763	121
ENSMUSG00000087899	miRNA	Mir1942	ENSMUST00000157274	miRNA		15	-1	76215673	63
ENSMUSG00000088397	snoRNA	Gm26311	ENSMUST00000157772	snoRNA		10	-1	117183411	77
ENSMUSG00000089047	rRNA	Gm26171	ENSMUST00000158422	rRNA		12	1	12106737	131
ENSMUSG00000095437	miRNA	Gm23606	ENSMUST00000116938	miRNA		18	1	24558602	121
ENSMUSG00000096782	miRNA	Gm24640	ENSMUST00000116949	miRNA		2	1	10489971	126
ENSMUSG00000098903	miRNA	Gm28022	ENSMUST00000184168	miRNA		5	-1	23279911	46
ENSMUSG00000095222	miRNA	Mir467a-9	ENSMUST00000179752	miRNA		2	1	10498393	83
ENSMUSG00000098541	misc_RNA	Gm27535	ENSMUST00000183814	misc_RNA		15	1	102949776	157
ENSMUSG00000096454	snoRNA	Gm23310	ENSMUST00000179105	snoRNA		7	-1	59514745	79
ENSMUSG00000064876	snRNA	Gm23378	ENSMUST00000082942	snRNA		X	-1	104001479	107
ENSMUSG00000093303	miRNA	Gm23800	ENSMUST00000175562	miRNA		19	-1	39007089	64
ENSMUSG00000077455	snoRNA	Gm25917	ENSMUST00000104267	snoRNA		12	-1	56252444	130
ENSMUSG00000065088	snoRNA	Gm26494	ENSMUST00000083154	snoRNA		X	1	37499317	143
ENSMUSG00000088112	misc_RNA	Gm24065	ENSMUST00000157487	misc_RNA		13	1	12666051	264
ENSMUSG00000065899	snoRNA	Gm24523	ENSMUST00000083965	snoRNA		15	-1	34440922	132
ENSMUSG00000092701	miRNA	Gm24515	ENSMUST00000174960	miRNA		3	-1	129684241	109
ENSMUSG00000089205	snRNA	Gm24577	ENSMUST00000158580	snRNA		X	1	101005821	63
ENSMUSG00000089045	snoRNA	Gm26169	ENSMUST00000158420	snoRNA		1	1	186676742	135
ENSMUSG00000065591	snRNA	Gm22753	ENSMUST00000083657	snRNA		11	-1	23479667	107
ENSMUSG00000099072	miRNA	Mir7673	ENSMUST00000184567	miRNA		X	1	94274574	64
ENSMUSG00000077252	snoRNA	Gm26077	ENSMUST00000104064	snoRNA		1	-1	172936334	123
ENSMUSG00000087898	misc_RNA	Gm25271	ENSMUST00000157273	misc_RNA		13	1	13789344	290
ENSMUSG00000065107	rRNA	n-R5s88	ENSMUST00000083173	rRNA		9	1	102127888	118
ENSMUSG00000105001	miRNA	Gm47275	ENSMUST00000197964	miRNA		10	-1	128559319	119
ENSMUSG00000075760	snRNA	Gm25414	ENSMUST00000101814	snRNA		12	1	14506587	107
ENSMUSG00000088521	snoRNA	Gm26088	ENSMUST00000157896	snoRNA		13	1	77676821	131
ENSMUSG00000088970	snRNA	Gm23763	ENSMUST00000158345	snRNA		1	-1	136990270	60
ENSMUSG00000092957	miRNA	Gm26219	ENSMUST00000175216	miRNA		16	-1	18361506	71
ENSMUSG00000095374	snoRNA	Snord116l16	ENSMUST00000178777	snoRNA		7	-1	59866881	94
ENSMUSG00000084631	misc_RNA	Gm23885	ENSMUST00000122682	misc_RNA		1	1	194858657	294
ENSMUSG00000096331	snRNA	Gm24712	ENSMUST00000157895	snRNA		6	1	130146881	74
ENSMUSG00000089084	misc_RNA	Gm24005	ENSMUST00000158459	misc_RNA		6	1	111627988	296
ENSMUSG00000089213	miRNA	Gm23388	ENSMUST00000158588	miRNA		8	-1	85112068	57
ENSMUSG00000077792	snoRNA	Gm25564	ENSMUST00000104604	snoRNA		12	1	28350263	132
ENSMUSG00000098954	miRNA	Mir7658	ENSMUST00000184043	miRNA		4	-1	156230115	57
ENSMUSG00000065102	rRNA	n-R5s50	ENSMUST00000083168	rRNA		14	1	110161835	111
ENSMUSG00000088687	snoRNA	Gm23996	ENSMUST00000158062	snoRNA		10	-1	127953175	131
ENSMUSG00000099142	miRNA	Mir8108	ENSMUST00000184998	miRNA		8	-1	25159233	109
ENSMUSG00000089075	misc_RNA	Gm23820	ENSMUST00000158450	misc_RNA		3	1	103082876	300
ENSMUSG00000096290	snRNA	Gm23932	ENSMUST00000082914	snRNA		5	-1	69386172	107
ENSMUSG00000065201	snRNA	Gm24612	ENSMUST00000083267	snRNA		11	-1	82596179	107
ENSMUSG00000096583	miRNA	Mir669a-1	ENSMUST00000180238	miRNA		2	1	10476853	97
ENSMUSG00000065743	snRNA	Gm25008	ENSMUST00000083809	snRNA		17	1	45620679	81
ENSMUSG00000089437	snRNA	Gm23199	ENSMUST00000158812	snRNA		X	1	140679696	107
ENSMUSG00000087914	misc_RNA	Gm24910	ENSMUST00000157289	misc_RNA		7	1	40363450	272
ENSMUSG00000088514	misc_RNA	Gm24436	ENSMUST00000157889	misc_RNA		5	1	31870046	302
ENSMUSG00000094471	snRNA	Gm25937	ENSMUST00000083912	snRNA		5	1	95867334	107
ENSMUSG00000080687	miRNA	Mir1197	ENSMUST00000117037	miRNA		12	1	109712317	120
ENSMUSG00000077847	miRNA	Mir105	ENSMUST00000104655	miRNA		X	-1	72591579	80
ENSMUSG00000065275	rRNA	n-R5s217	ENSMUST00000083341	rRNA		1	-1	138878377	116
ENSMUSG00000092868	miRNA	Mir5113	ENSMUST00000175127	miRNA		15	1	80940039	82
ENSMUSG00000095133	snRNA	Gm24897	ENSMUST00000179033	snRNA		5	1	103898879	107
ENSMUSG00000098481	miRNA	Gm27387	ENSMUST00000184583	miRNA		13	1	38086202	116
ENSMUSG00000093070	miRNA	Gm25952	ENSMUST00000175329	miRNA		5	1	65989045	74
ENSMUSG00000064905	misc_RNA	Gm25403	ENSMUST00000082971	misc_RNA		8	1	65367301	143
ENSMUSG00000095594	snRNA	Gm24304	ENSMUST00000177635	snRNA		5	1	80098908	107
ENSMUSG00000088794	misc_RNA	Gm22538	ENSMUST00000158169	misc_RNA		3	-1	73208001	299
ENSMUSG00000064921	snRNA	Gm22229	ENSMUST00000082987	snRNA		9	1	70537814	108
ENSMUSG00000076237	miRNA	Gm26300	ENSMUST00000102282	miRNA		13	-1	22083634	94
ENSMUSG00000065016	snoRNA	Snora3	ENSMUST00000083082	snoRNA		7	1	109520120	132
ENSMUSG00000104767	miRNA	Gm47277	ENSMUST00000197610	miRNA		8	1	13876091	94
ENSMUSG00000093040	miRNA	Gm26141	ENSMUST00000175299	miRNA		2	1	158740138	126
ENSMUSG00000095340	miRNA	Mir669j	ENSMUST00000179023	miRNA		2	1	10477910	121
ENSMUSG00000096285	snoRNA	Gm22253	ENSMUST00000179870	snoRNA		7	-1	59600854	79
ENSMUSG00000088379	snoRNA	Gm25185	ENSMUST00000157754	snoRNA		6	1	90857537	96
ENSMUSG00000089357	miRNA	Mir2137	ENSMUST00000158732	miRNA		X	1	72992079	66
ENSMUSG00000077579	snoRNA	Gm24891	ENSMUST00000104391	snoRNA		16	-1	87528165	136
ENSMUSG00000077289	snoRNA	Gm25766	ENSMUST00000104101	snoRNA		8	-1	113519606	131
ENSMUSG00000064907	snRNA	Gm25405	ENSMUST00000082973	snRNA		7	1	104423274	107
ENSMUSG00000096415	snRNA	Gm24722	ENSMUST00000179017	snRNA		17	1	84391429	107
ENSMUSG00000095739	snoRNA	Gm25314	ENSMUST00000178810	snoRNA		7	-1	59372053	79
ENSMUSG00000088349	snRNA	Gm22335	ENSMUST00000157724	snRNA		4	1	117027211	99
ENSMUSG00000098672	miRNA	Mir6911	ENSMUST00000184241	miRNA		10	1	80278164	69
ENSMUSG00000098675	miRNA	Mir6364	ENSMUST00000183396	miRNA		16	-1	5215874	86
ENSMUSG00000064382	snoRNA	Gm26447	ENSMUST00000082448	snoRNA		16	1	23111301	129
ENSMUSG00000088124	snRNA	Gm22867	ENSMUST00000157499	snRNA		2	1	44428935	109
ENSMUSG00000096367	rRNA	n-R5s107	ENSMUST00000179704	rRNA		8	-1	123550785	119
ENSMUSG00000064541	snRNA	Gm22978	ENSMUST00000082607	snRNA		17	1	49292742	160
ENSMUSG00000088040	snoRNA	Gm23329	ENSMUST00000157415	snoRNA		8	-1	60807846	108
ENSMUSG00000092666	miRNA	Gm22408	ENSMUST00000174925	miRNA		3	1	117322941	65
ENSMUSG00000096480	miRNA	Gm23976	ENSMUST00000175001	miRNA		3	-1	4305293	101
ENSMUSG00000065571	miRNA	Mir326	ENSMUST00000083637	miRNA		7	1	99552269	95
ENSMUSG00000093922	protein_coding	Rpl36-ps4	ENSMUST00000179601	protein_coding	principal1	17	1	87920977	354
ENSMUSG00000040065	protein_coding	Pfpl	ENSMUST00000168148	protein_coding	principal1	19	1	12427905	3918
ENSMUSG00000075036	pseudogene	Gm10805	ENSMUST00000099710	pseudogene		2	-1	91920928	399
ENSMUSG00000094108	pseudogene	Gm17258	ENSMUST00000168462	pseudogene		2	1	176257249	1266
ENSMUSG00000095927	protein_coding	Gm21822	ENSMUST00000179302	protein_coding	principal1	Y	1	18654482	543
ENSMUSG00000095207	protein_coding	CR974586.1	ENSMUST00000177766	protein_coding		JH584293.1	-1	206144	2214
ENSMUSG00000091008	IG_LV_gene	Gm17472	ENSMUST00000167638	IG_LV_gene	principal1	6	1	42980690	352
ENSMUSG00000089439	snoRNA	Gm23195	ENSMUST00000158814	snoRNA		12	1	90815197	129
ENSMUSG00000095025	snRNA	Gm24018	ENSMUST00000083232	snRNA		13	-1	17809697	107
ENSMUSG00000070214	snRNA	Gm23058	ENSMUST00000093703	snRNA		10	-1	58349604	107
ENSMUSG00000089258	snoRNA	Gm25711	ENSMUST00000158633	snoRNA		15	1	20908872	128
ENSMUSG00000088609	miRNA	Gm24187	ENSMUST00000157984	miRNA		13	-1	9834525	57
ENSMUSG00000088874	ribozyme	Gm25863	ENSMUST00000158249	ribozyme		3	-1	16115943	329
ENSMUSG00000076288	miRNA	Mir301b	ENSMUST00000102333	miRNA		16	-1	17124496	97
ENSMUSG00000105899	miRNA	Gm44383	ENSMUST00000198940	miRNA		15	1	101678032	129
ENSMUSG00000077629	snoRNA	Gm23769	ENSMUST00000104441	snoRNA		17	-1	59225843	121
ENSMUSG00000098388	miRNA	Mir8109	ENSMUST00000184375	miRNA		8	1	85700905	117
ENSMUSG00000077208	snoRNA	Gm25607	ENSMUST00000104020	snoRNA		9	-1	97439627	127
ENSMUSG00000093206	miRNA	Gm22413	ENSMUST00000175465	miRNA		X	1	41654234	85
ENSMUSG00000088167	snRNA	Gm23535	ENSMUST00000157542	snRNA		1	-1	149707482	106
ENSMUSG00000084678	snRNA	Gm26020	ENSMUST00000122729	snRNA		X	1	105819883	183
ENSMUSG00000098569	miRNA	Mir7020	ENSMUST00000183787	miRNA		4	1	139644042	70
ENSMUSG00000076946	miRNA	Mir582	ENSMUST00000103758	miRNA		13	1	109324744	81
ENSMUSG00000106236	miRNA	Gm38670	ENSMUST00000199248	miRNA		7	1	30552828	77
ENSMUSG00000070075	miRNA	Mir490	ENSMUST00000093567	miRNA		6	1	36421742	84
ENSMUSG00000065127	snRNA	Gm26127	ENSMUST00000083193	snRNA		2	1	39027777	107
ENSMUSG00000077791	snRNA	Gm25563	ENSMUST00000104603	snRNA		12	-1	76420490	74
ENSMUSG00000065343	misc_RNA	Gm25580	ENSMUST00000083409	misc_RNA		6	-1	30144127	327
ENSMUSG00000077785	snoRNA	Gm23910	ENSMUST00000104597	snoRNA		12	-1	73145905	132
ENSMUSG00000089470	snRNA	Gm25366	ENSMUST00000158845	snRNA		X	-1	115373964	124
ENSMUSG00000088224	snoRNA	Gm25406	ENSMUST00000157599	snoRNA		17	1	73193912	105
ENSMUSG00000064824	snRNA	Gm22443	ENSMUST00000082890	snRNA		19	-1	13301107	107
ENSMUSG00000105911	snoRNA	Snora16a	ENSMUST00000196061	snoRNA		4	1	132309464	137
ENSMUSG00000089090	misc_RNA	Gm25655	ENSMUST00000158465	misc_RNA		4	-1	19514779	290
ENSMUSG00000088364	snRNA	Gm28020	ENSMUST00000157739	snRNA		15	-1	72721387	67
ENSMUSG00000077291	snoRNA	Gm24124	ENSMUST00000104103	snoRNA		19	-1	13635714	132
ENSMUSG00000098836	misc_RNA	Gm27572	ENSMUST00000183702	misc_RNA		13	-1	108498638	255
ENSMUSG00000076228	miRNA	Gm25595	ENSMUST00000102273	miRNA		10	1	81504622	97
ENSMUSG00000098815	miRNA	Gm27785	ENSMUST00000184268	miRNA		1	1	117561230	110
ENSMUSG00000065523	miRNA	Mir192	ENSMUST00000083589	miRNA		19	1	6264844	89
ENSMUSG00000088501	snRNA	Gm22788	ENSMUST00000157876	snRNA		18	-1	34024280	61
ENSMUSG00000065176	snRNA	Rnu12	ENSMUST00000083242	snRNA		15	1	83149644	151
ENSMUSG00000077717	snoRNA	Gm25726	ENSMUST00000104529	snoRNA		6	-1	57859948	129
ENSMUSG00000093356	rRNA	Gm23289	ENSMUST00000175615	rRNA		12	1	104109283	108
ENSMUSG00000076949	miRNA	Gm22066	ENSMUST00000103761	miRNA		3	-1	123015368	110
ENSMUSG00000094367	snRNA	Gm26058	ENSMUST00000180294	snRNA		6	-1	10840693	107
ENSMUSG00000077424	snoRNA	Gm24279	ENSMUST00000104236	snoRNA		5	1	98541484	131
ENSMUSG00000077303	snRNA	Gm22472	ENSMUST00000104115	snRNA		X	1	101242738	134
ENSMUSG00000094213	snoRNA	Gm23449	ENSMUST00000179208	snoRNA		7	-1	59512873	79
ENSMUSG00000076052	miRNA	Mir541	ENSMUST00000102097	miRNA		12	1	109742409	90
ENSMUSG00000088916	snRNA	Gm22607	ENSMUST00000158291	snRNA		1	-1	9834602	105
ENSMUSG00000088473	snRNA	Gm23078	ENSMUST00000157848	snRNA		17	-1	40917687	148
ENSMUSG00000105438	miRNA	Mir7094-1	ENSMUST00000199671	miRNA		12	-1	114469466	60
ENSMUSG00000065884	snoRNA	Gm22864	ENSMUST00000083950	snoRNA		4	-1	75280755	130
ENSMUSG00000092853	miRNA	Gm25959	ENSMUST00000175112	miRNA		2	1	47541984	102
ENSMUSG00000093878	miRNA	Gm25458	ENSMUST00000178981	miRNA		6	-1	55308905	101
ENSMUSG00000104741	miRNA	Mir3087	ENSMUST00000199405	miRNA		2	1	25442779	56
ENSMUSG00000093152	miRNA	Gm25032	ENSMUST00000175411	miRNA		9	1	39075411	84
ENSMUSG00000104840	miRNA	Mir7230	ENSMUST00000195977	miRNA		5	-1	113337645	56
ENSMUSG00000077181	snoRNA	Gm25093	ENSMUST00000103993	snoRNA		15	1	44364085	132
ENSMUSG00000064802	snRNA	Gm24036	ENSMUST00000082868	snRNA		11	-1	12054303	156
ENSMUSG00000080586	miRNA	Mir1187	ENSMUST00000116936	miRNA		5	-1	82799065	122
ENSMUSG00000093348	miRNA	Mir3101	ENSMUST00000175607	miRNA		7	-1	27176093	88
ENSMUSG00000065735	snoRNA	Snord80	ENSMUST00000083801	snoRNA		1	1	161037601	81
ENSMUSG00000098907	miRNA	Mir7082	ENSMUST00000183526	miRNA		9	-1	21075588	92
ENSMUSG00000077377	snoRNA	Gm25168	ENSMUST00000104189	snoRNA		1	1	15757832	132
ENSMUSG00000098730	miRNA	Mir6407	ENSMUST00000184510	miRNA		19	-1	53010756	101
ENSMUSG00000088926	rRNA	Gm22687	ENSMUST00000158301	rRNA		2	1	166189697	105
ENSMUSG00000084638	snRNA	Gm23889	ENSMUST00000122689	snRNA		9	1	114838173	104
ENSMUSG00000065543	miRNA	Mir330	ENSMUST00000083609	miRNA		7	1	19181465	98
ENSMUSG00000088537	rRNA	Gm23279	ENSMUST00000157912	rRNA		3	1	127731594	97
ENSMUSG00000106626	miRNA	Gm44302	ENSMUST00000104762	miRNA		15	1	79472381	91
ENSMUSG00000077320	snoRNA	Gm22284	ENSMUST00000104132	snoRNA		11	1	45639383	132
ENSMUSG00000080649	miRNA	Gm26156	ENSMUST00000116999	miRNA		2	1	10499204	123
ENSMUSG00000093292	miRNA	Mir5118	ENSMUST00000175551	miRNA		16	1	55494731	67
ENSMUSG00000092683	miRNA	Gm25747	ENSMUST00000174942	miRNA		12	-1	113424722	78
ENSMUSG00000084722	misc_RNA	Gm24140	ENSMUST00000122773	misc_RNA		14	-1	17885133	326
ENSMUSG00000089451	snRNA	Gm24226	ENSMUST00000158826	snRNA		10	-1	84811183	97
ENSMUSG00000089380	snoRNA	Gm24677	ENSMUST00000158755	snoRNA		8	-1	67279231	150
ENSMUSG00000098401	miRNA	Mir6377	ENSMUST00000183760	miRNA		3	1	57616609	114
ENSMUSG00000064575	snRNA	Gm25798	ENSMUST00000082641	snRNA		7	-1	138101539	107
ENSMUSG00000065611	miRNA	Mir23a	ENSMUST00000083677	miRNA		8	1	84208518	75
ENSMUSG00000095853	miRNA	Gm22616	ENSMUST00000179783	miRNA		1	1	14182578	100
ENSMUSG00000089323	miRNA	Gm25978	ENSMUST00000158698	miRNA		4	-1	23626745	90
ENSMUSG00000087956	misc_RNA	Gm22561	ENSMUST00000157331	misc_RNA		19	-1	58786691	84
ENSMUSG00000070077	miRNA	Mir491	ENSMUST00000093569	miRNA		4	1	88122040	86
ENSMUSG00000093346	miRNA	Gm26115	ENSMUST00000175605	miRNA		19	-1	4215488	87
ENSMUSG00000095178	snRNA	Gm22716	ENSMUST00000177596	snRNA		5	-1	110677230	107
ENSMUSG00000064637	snoRNA	Snora20	ENSMUST00000082703	snoRNA		17	1	12922790	128
ENSMUSG00000095641	snoRNA	Gm25615	ENSMUST00000177836	snoRNA		7	-1	59864333	94
ENSMUSG00000092811	miRNA	Gm23636	ENSMUST00000175070	miRNA		2	1	22666658	95
ENSMUSG00000099022	miRNA	Gm27924	ENSMUST00000184191	miRNA		15	1	82555116	60
ENSMUSG00000094688	miRNA	Mir467a-7	ENSMUST00000178635	miRNA		2	1	10493510	83
ENSMUSG00000089049	misc_RNA	Gm24358	ENSMUST00000158424	misc_RNA		11	-1	100774800	288
ENSMUSG00000089191	snoRNA	Gm25770	ENSMUST00000158566	snoRNA		X	-1	137093726	115
ENSMUSG00000077160	snoRNA	Gm24118	ENSMUST00000103972	snoRNA		14	1	56240560	126
ENSMUSG00000065577	miRNA	Mir329	ENSMUST00000083643	miRNA		12	1	109713481	97
ENSMUSG00000088226	misc_RNA	Gm22596	ENSMUST00000157601	misc_RNA		2	1	164761659	316
ENSMUSG00000092826	miRNA	Gm24197	ENSMUST00000175085	miRNA		8	-1	84925633	109
ENSMUSG00000088249	rRNA	Gm25908	ENSMUST00000157624	rRNA		16	1	84818097	98
ENSMUSG00000091367	pseudogene	Gm17711	ENSMUST00000172028	pseudogene		10	1	18011268	237
ENSMUSG00000094498	pseudogene	Gm10582	ENSMUST00000097987	pseudogene		4	-1	88761500	396
ENSMUSG00000079192	protein_coding	AC125149.1	ENSMUST00000111364	protein_coding		GL456210.1	1	123792	255
ENSMUSG00000079808	protein_coding	AC168977.1	ENSMUST00000115924	protein_coding		GL456212.1	-1	150452	1910
ENSMUSG00000089618	misc_RNA	Gm23776	ENSMUST00000158993	misc_RNA		10	1	95603792	325
ENSMUSG00000094987	snoRNA	Snord116l15	ENSMUST00000177940	snoRNA		7	-1	59869423	94
ENSMUSG00000093183	misc_RNA	Gm25687	ENSMUST00000175442	misc_RNA		4	1	54468352	241
ENSMUSG00000089098	snoRNA	Gm25653	ENSMUST00000158473	snoRNA		4	-1	72906338	138
ENSMUSG00000084605	misc_RNA	Gm23837	ENSMUST00000122656	misc_RNA		17	1	17783132	286
ENSMUSG00000096335	rRNA	n-R5s108	ENSMUST00000177575	rRNA		8	-1	123552482	119
ENSMUSG00000099258	miRNA	Mir7047	ENSMUST00000184595	miRNA		7	-1	24987667	64
ENSMUSG00000065228	snoRNA	Gm25789	ENSMUST00000083294	snoRNA		1	1	161038308	76
ENSMUSG00000089079	snoRNA	Gm24503	ENSMUST00000158454	snoRNA		3	-1	50838715	135
ENSMUSG00000087951	snRNA	Gm22558	ENSMUST00000157326	snRNA		16	-1	17006201	95
ENSMUSG00000106649	miRNA	Gm49349	ENSMUST00000198150	miRNA		9	1	15314842	67
ENSMUSG00000084449	snRNA	Gm26257	ENSMUST00000122500	snRNA		10	1	51182299	107
ENSMUSG00000105863	snoRNA	Gm25617	ENSMUST00000198387	snoRNA		16	1	38158008	132
ENSMUSG00000065889	snRNA	Gm22868	ENSMUST00000083955	snRNA		11	-1	26337703	164
ENSMUSG00000094128	miRNA	Gm23943	ENSMUST00000179712	miRNA		1	-1	56999275	121
ENSMUSG00000065656	snRNA	Gm23104	ENSMUST00000083722	snRNA		13	-1	45026355	104
ENSMUSG00000088045	snoRNA	Gm23327	ENSMUST00000157420	snoRNA		15	-1	30004263	78
ENSMUSG00000088114	snoRNA	Gm24061	ENSMUST00000157489	snoRNA		X	-1	101141552	120
ENSMUSG00000088553	snRNA	Gm22101	ENSMUST00000157928	snRNA		10	-1	111129209	103
ENSMUSG00000089313	snoRNA	Gm23182	ENSMUST00000158688	snoRNA		10	1	128349241	135
ENSMUSG00000093974	snoRNA	Snord116l17	ENSMUST00000178936	snoRNA		7	-1	59861824	94
ENSMUSG00000098653	miRNA	Gm27672	ENSMUST00000183751	miRNA		10	1	58965543	204
ENSMUSG00000088922	snRNA	Gm24296	ENSMUST00000158297	snRNA		12	1	54997072	106
ENSMUSG00000088102	misc_RNA	Gm24113	ENSMUST00000157477	misc_RNA		5	1	91982705	276
ENSMUSG00000084696	snRNA	Gm24892	ENSMUST00000122747	snRNA		2	1	181183512	104
ENSMUSG00000065337	snRNA	Gm24929	ENSMUST00000083403	snRNA		8	1	52078604	139
ENSMUSG00000093132	miRNA	Gm25993	ENSMUST00000175391	miRNA		1	1	176879834	80
ENSMUSG00000065806	rRNA	n-R5s69	ENSMUST00000083872	rRNA		11	1	57764427	119
ENSMUSG00000089133	snoRNA	Gm24771	ENSMUST00000158508	snoRNA		15	1	35487400	137
ENSMUSG00000089333	snoRNA	Gm24343	ENSMUST00000158708	snoRNA		10	1	14233513	111
ENSMUSG00000065274	snoRNA	Gm25125	ENSMUST00000083340	snoRNA		9	1	85472734	136
ENSMUSG00000084524	misc_RNA	Gm24184	ENSMUST00000122575	misc_RNA		8	-1	31661431	101
ENSMUSG00000084667	snoRNA	Gm23212	ENSMUST00000122718	snoRNA		1	1	161036682	60
ENSMUSG00000084551	snRNA	Gm24839	ENSMUST00000122602	snRNA		5	-1	126513981	107
ENSMUSG00000065843	snRNA	Gm25186	ENSMUST00000083909	snRNA		13	-1	31737740	108
ENSMUSG00000094510	snRNA	Gm24565	ENSMUST00000180099	snRNA		6	1	97730439	107
ENSMUSG00000087805	snRNA	Gm27926	ENSMUST00000157180	snRNA		15	1	53383919	66
ENSMUSG00000092832	miRNA	Mir3088	ENSMUST00000175091	miRNA		2	1	28733278	74
ENSMUSG00000088985	miRNA	Mir1946a	ENSMUST00000158360	miRNA		16	-1	32267583	134
ENSMUSG00000077718	snoRNA	Gm25723	ENSMUST00000104530	snoRNA		16	-1	52946929	126
ENSMUSG00000088814	rRNA	Gm22385	ENSMUST00000158189	rRNA		13	1	113403088	101
ENSMUSG00000093112	misc_RNA	Gm22701	ENSMUST00000175371	misc_RNA		8	1	110498852	291
ENSMUSG00000095147	miRNA	Mir3070a	ENSMUST00000175468	miRNA		12	1	109587943	89
ENSMUSG00000080428	snRNA	Gm24831	ENSMUST00000116778	snRNA		X	-1	113332225	126
ENSMUSG00000098583	miRNA	Mir7044	ENSMUST00000184597	miRNA		6	1	118085192	72
ENSMUSG00000106340	miRNA	Mir290b	ENSMUST00000196383	miRNA		7	-1	3218695	58
ENSMUSG00000088774	snoRNA	Gm26036	ENSMUST00000158149	snoRNA		4	1	154134030	144
ENSMUSG00000098940	snRNA	Gm27639	ENSMUST00000184937	snRNA		9	-1	22772835	85
ENSMUSG00000089308	snoRNA	Gm24837	ENSMUST00000158683	snoRNA		4	-1	41211582	81
ENSMUSG00000088846	snoRNA	Gm26354	ENSMUST00000158221	snoRNA		3	-1	22410051	129
ENSMUSG00000078060	miRNA	Mir466l	ENSMUST00000104866	miRNA		2	1	10516097	121
ENSMUSG00000089499	snRNA	Gm25643	ENSMUST00000158874	snRNA		2	1	153155013	103
ENSMUSG00000095955	snRNA	Gm22360	ENSMUST00000179775	snRNA		1	-1	95832235	107
ENSMUSG00000092776	miRNA	Gm26195	ENSMUST00000175035	miRNA		9	-1	9671041	101
ENSMUSG00000088877	snoRNA	Gm25860	ENSMUST00000158252	snoRNA		7	-1	93147971	126
ENSMUSG00000104652	miRNA	Mir669a-8	ENSMUST00000200268	miRNA		2	1	10491566	87
ENSMUSG00000084453	snRNA	Gm24596	ENSMUST00000122504	snRNA		7	-1	126563980	107
ENSMUSG00000065667	snRNA	Gm22576	ENSMUST00000083733	snRNA		16	-1	48943102	104
ENSMUSG00000089529	misc_RNA	Gm22325	ENSMUST00000158904	misc_RNA		18	1	32293350	308
ENSMUSG00000076031	miRNA	Gm22751	ENSMUST00000102077	miRNA		11	1	45829779	109
ENSMUSG00000087990	scaRNA	Gm25058	ENSMUST00000157365	scaRNA		11	-1	11913748	128
ENSMUSG00000070173	snRNA	Gm24164	ENSMUST00000093663	snRNA		16	1	62571036	104
ENSMUSG00000089306	snRNA	Gm24842	ENSMUST00000158681	snRNA		7	1	109988078	54
ENSMUSG00000065913	snRNA	Gm24448	ENSMUST00000083979	snRNA		4	-1	63567768	107
ENSMUSG00000092932	misc_RNA	Gm22906	ENSMUST00000175191	misc_RNA		1	1	85784713	250
ENSMUSG00000087904	misc_RNA	Gm22036	ENSMUST00000157279	misc_RNA		6	-1	141915292	215
ENSMUSG00000065373	snRNA	Gm22740	ENSMUST00000083439	snRNA		5	1	113044144	109
ENSMUSG00000092889	miRNA	Gm22121	ENSMUST00000175148	miRNA		11	1	44469013	54
ENSMUSG00000089311	snoRNA	Gm23180	ENSMUST00000158686	snoRNA		16	1	54628428	125
ENSMUSG00000088799	rRNA	Gm22535	ENSMUST00000158174	rRNA		7	1	35101822	119
ENSMUSG00000093315	miRNA	Mir5114	ENSMUST00000175574	miRNA		19	1	44303171	61
ENSMUSG00000098400	miRNA	Mir7680	ENSMUST00000183640	miRNA		16	-1	21256066	54
ENSMUSG00000106193	miRNA	Mir7090	ENSMUST00000198187	miRNA		9	1	120955086	62
ENSMUSG00000087734	snRNA	Gm24646	ENSMUST00000157109	snRNA		9	-1	45879648	99
ENSMUSG00000096482	snRNA	Gm23977	ENSMUST00000177871	snRNA		6	1	129897932	74
ENSMUSG00000098339	miRNA	Mir6977	ENSMUST00000184960	miRNA		17	-1	56418909	64
ENSMUSG00000077776	snoRNA	Gm22371	ENSMUST00000104588	snoRNA		1	-1	57422373	130
ENSMUSG00000084435	snRNA	Gm23429	ENSMUST00000122486	snRNA		5	-1	79750529	149
ENSMUSG00000064632	snRNA	Gm25142	ENSMUST00000082698	snRNA		11	1	5251850	107
ENSMUSG00000095871	miRNA	Gm25931	ENSMUST00000175230	miRNA		4	-1	40850402	83
ENSMUSG00000087999	snRNA	Gm25060	ENSMUST00000157374	snRNA		18	-1	82356106	130
ENSMUSG00000065512	miRNA	Mir138-2	ENSMUST00000083578	miRNA		8	1	94324311	71
ENSMUSG00000077903	miRNA	Mir294	ENSMUST00000104710	miRNA		7	1	3220641	84
ENSMUSG00000064788	snoRNA	Gm22683	ENSMUST00000082854	snoRNA		11	1	102829878	137
ENSMUSG00000099260	miRNA	Mir6954	ENSMUST00000183412	miRNA		15	1	76433214	60
ENSMUSG00000098901	miRNA	Gm28023	ENSMUST00000184556	miRNA		15	-1	82548683	60
ENSMUSG00000088145	snoRNA	Gm24719	ENSMUST00000157520	snoRNA		1	-1	159983605	110
ENSMUSG00000098922	miRNA	Mir8106	ENSMUST00000184520	miRNA		9	-1	122274028	139
ENSMUSG00000064511	snoRNA	Gm22459	ENSMUST00000082577	snoRNA		16	-1	53404193	108
ENSMUSG00000095037	snoRNA	Gm22347	ENSMUST00000180276	snoRNA		14	-1	102329661	132
ENSMUSG00000094261	miRNA	Mir466b-6	ENSMUST00000180061	miRNA		2	1	10493798	90
ENSMUSG00000095395	snoRNA	Gm25617	ENSMUST00000179548	snoRNA		16	1	38158008	133
ENSMUSG00000064999	misc_RNA	Gm26035	ENSMUST00000083065	misc_RNA		X	-1	152923760	308
ENSMUSG00000095342	snoRNA	Gm26096	ENSMUST00000179084	snoRNA		7	-1	59373922	79
ENSMUSG00000065686	snoRNA	Snora5c	ENSMUST00000083752	snoRNA		11	-1	6620454	136
ENSMUSG00000089124	snRNA	Gm26402	ENSMUST00000158499	snRNA		10	-1	75613269	113
ENSMUSG00000094791	protein_coding	AC126035.1	ENSMUST00000179677	protein_coding		JH584299.1	1	314841	837
ENSMUSG00000095386	protein_coding	Gm17662	ENSMUST00000179793	protein_coding	principal1	4	1	104857329	24
ENSMUSG00000095041	protein_coding	AC149090.1	ENSMUST00000179505	protein_coding		JH584304.1	-1	59667	2373
ENSMUSG00000095041	protein_coding	AC149090.1	ENSMUST00000178343	protein_coding		JH584304.1	-1	59690	4060
ENSMUSG00000094354	protein_coding	Gm21882	ENSMUST00000178332	protein_coding	principal1	Y	-1	40381523	1083
ENSMUSG00000088933	snRNA	Gm22983	ENSMUST00000158308	snRNA		4	-1	124335681	104
ENSMUSG00000094267	miRNA	Gm25123	ENSMUST00000179154	miRNA		4	-1	107697954	121
ENSMUSG00000077282	snoRNA	Gm26395	ENSMUST00000104094	snoRNA		13	1	36654405	132
ENSMUSG00000094903	snoRNA	Gm23575	ENSMUST00000178406	snoRNA		7	-1	59604597	79
ENSMUSG00000064605	snRNA	Gm22220	ENSMUST00000082671	snRNA		12	1	54239238	149
ENSMUSG00000077896	miRNA	Mir879	ENSMUST00000104703	miRNA		5	1	9375704	76
ENSMUSG00000092705	miRNA	Gm24513	ENSMUST00000174964	miRNA		1	-1	63273363	138
ENSMUSG00000080538	snRNA	Gm25541	ENSMUST00000116888	snRNA		2	-1	27539930	126
ENSMUSG00000089607	snRNA	Gm22500	ENSMUST00000158982	snRNA		16	1	38927209	99
ENSMUSG00000093117	snRNA	Gm22699	ENSMUST00000175376	snRNA		14	-1	48769458	105
ENSMUSG00000064984	snoRNA	Snord73a	ENSMUST00000083050	snoRNA		3	-1	86138858	68
ENSMUSG00000094916	rRNA	Gm26391	ENSMUST00000179843	rRNA		8	-1	123593189	119
ENSMUSG00000093080	miRNA	Mir3060	ENSMUST00000175339	miRNA		11	1	4139364	83
ENSMUSG00000087750	snRNA	Gm23468	ENSMUST00000157125	snRNA		8	-1	77569602	108
ENSMUSG00000092830	miRNA	Mir3963	ENSMUST00000175089	miRNA		3	-1	151023862	71
ENSMUSG00000088497	rRNA	Gm22651	ENSMUST00000157872	rRNA		2	1	118351238	94
ENSMUSG00000080367	miRNA	Gm25774	ENSMUST00000116717	miRNA		7	1	103415806	121
ENSMUSG00000077640	snoRNA	Gm24986	ENSMUST00000104452	snoRNA		12	1	106221075	132
ENSMUSG00000065560	miRNA	Mir148b	ENSMUST00000083626	miRNA		15	1	103285125	97
ENSMUSG00000080347	miRNA	Gm24587	ENSMUST00000116697	miRNA		10	-1	96855670	89
ENSMUSG00000064987	snRNA	Gm25260	ENSMUST00000083053	snRNA		6	1	67027043	134
ENSMUSG00000084519	snoRNA	Gm22478	ENSMUST00000122570	snoRNA		7	1	45388531	154
ENSMUSG00000084433	snoRNA	Gm25945	ENSMUST00000122484	snoRNA		3	1	88707158	135
ENSMUSG00000084589	snRNA	Gm25176	ENSMUST00000122640	snRNA		19	-1	26260493	125
ENSMUSG00000089562	snRNA	Gm24666	ENSMUST00000158937	snRNA		5	1	9169063	167
ENSMUSG00000087894	snRNA	Gm25280	ENSMUST00000157269	snRNA		4	-1	138827476	101
ENSMUSG00000077902	miRNA	Gm25787	ENSMUST00000104709	miRNA		7	-1	111793011	92
ENSMUSG00000098585	miRNA	Gm27910	ENSMUST00000185004	miRNA		X	-1	24617117	107
ENSMUSG00000065625	snRNA	Gm24765	ENSMUST00000083691	snRNA		1	1	9458670	103
ENSMUSG00000096214	snRNA	Gm22634	ENSMUST00000177653	snRNA		12	1	54710308	164
ENSMUSG00000104991	miRNA	Gm44468	ENSMUST00000199516	miRNA		1	1	63025742	105
ENSMUSG00000088718	snoRNA	Gm22732	ENSMUST00000158093	snoRNA		4	1	37297905	121
ENSMUSG00000094803	snRNA	Gm26072	ENSMUST00000083135	snRNA		5	-1	70550947	107
ENSMUSG00000089072	snoRNA	Gm24500	ENSMUST00000158447	snoRNA		15	-1	34139376	124
ENSMUSG00000088133	misc_RNA	Gm22895	ENSMUST00000157508	misc_RNA		15	1	17935578	308
ENSMUSG00000098851	miRNA	Mir6353	ENSMUST00000183596	miRNA		1	-1	84218961	113
ENSMUSG00000098734	miRNA	Mir6335	ENSMUST00000184081	miRNA		2	1	67781043	98
ENSMUSG00000088017	misc_RNA	Gm23829	ENSMUST00000157392	misc_RNA		1	-1	47751568	270
ENSMUSG00000094477	miRNA	Gm23064	ENSMUST00000179866	miRNA		4	1	103471859	101
ENSMUSG00000095674	miRNA	Gm25100	ENSMUST00000179750	miRNA		7	1	3589164	101
ENSMUSG00000096048	snoRNA	Gm22510	ENSMUST00000179304	snoRNA		7	-1	59454933	79
ENSMUSG00000077379	snoRNA	Gm25170	ENSMUST00000104191	snoRNA		X	-1	130915427	129
ENSMUSG00000096070	snoRNA	Gm25350	ENSMUST00000177849	snoRNA		7	-1	59754095	94
ENSMUSG00000088239	misc_RNA	Gm25430	ENSMUST00000157614	misc_RNA		6	-1	142238827	289
ENSMUSG00000084526	rRNA	n-R5s192	ENSMUST00000122577	rRNA		4	1	124820821	119
ENSMUSG00000064616	snRNA	Gm26454	ENSMUST00000082682	snRNA		12	1	49009883	107
ENSMUSG00000098821	miRNA	Gm27397	ENSMUST00000184997	miRNA		15	1	20920214	107
ENSMUSG00000089062	snRNA	Gm22838	ENSMUST00000158437	snRNA		5	-1	99928381	99
ENSMUSG00000077038	miRNA	Mir669f	ENSMUST00000103850	miRNA		2	1	10467229	121
ENSMUSG00000099161	miRNA	Mir6419	ENSMUST00000184784	miRNA		2	1	17563514	113
ENSMUSG00000065489	miRNA	Mir365-2	ENSMUST00000083555	miRNA		11	1	79726400	112
ENSMUSG00000065769	snRNA	Gm23846	ENSMUST00000083835	snRNA		2	-1	140440647	107
ENSMUSG00000064932	rRNA	n-R5s36	ENSMUST00000082998	rRNA		16	-1	48410424	119
ENSMUSG00000084617	snRNA	Gm22073	ENSMUST00000122668	snRNA		3	-1	68547708	189
ENSMUSG00000065878	snoRNA	Snord34	ENSMUST00000083944	snoRNA		7	-1	45126670	70
ENSMUSG00000089598	snoRNA	Gm26158	ENSMUST00000158973	snoRNA		19	-1	60775639	119
ENSMUSG00000093164	misc_RNA	Gm22993	ENSMUST00000175423	misc_RNA		11	-1	74618513	254
ENSMUSG00000087915	misc_RNA	Gm24909	ENSMUST00000157290	misc_RNA		7	1	13338830	280
ENSMUSG00000105398	miRNA	Gm47305	ENSMUST00000200291	miRNA		12	-1	69361339	70
ENSMUSG00000093970	miRNA	Gm23358	ENSMUST00000103887	miRNA		1	-1	8588724	110
ENSMUSG00000098343	miRNA	Mir6240	ENSMUST00000184281	miRNA		5	1	114851948	117
ENSMUSG00000096823	snRNA	Gm24569	ENSMUST00000179338	snRNA		16	-1	36257613	104
ENSMUSG00000089533	rRNA	Gm25164	ENSMUST00000158908	rRNA		10	1	78518623	116
ENSMUSG00000088128	snRNA	Gm25720	ENSMUST00000157503	snRNA		15	-1	76214205	105
ENSMUSG00000098312	misc_RNA	Gm27953	ENSMUST00000185171	misc_RNA		2	-1	36087498	143
ENSMUSG00000065321	snRNA	Gm22057	ENSMUST00000083387	snRNA		X	-1	138303413	107
ENSMUSG00000098728	miRNA	Gm27336	ENSMUST00000185190	miRNA		6	-1	128931848	56
ENSMUSG00000094655	snRNA	Gm25360	ENSMUST00000178786	snRNA		1	1	72226240	191
ENSMUSG00000088986	miRNA	Gm25603	ENSMUST00000158361	miRNA		9	-1	62242867	105
ENSMUSG00000080527	miRNA	Gm23880	ENSMUST00000116877	miRNA		15	1	81586133	54
ENSMUSG00000089053	snRNA	Gm23352	ENSMUST00000158428	snRNA		17	-1	14792004	64
ENSMUSG00000077505	snoRNA	Gm24233	ENSMUST00000104317	snoRNA		12	1	59134072	122
ENSMUSG00000080616	snoRNA	Gm22152	ENSMUST00000116966	snoRNA		11	1	121030858	125
ENSMUSG00000065115	snRNA	Gm23298	ENSMUST00000083181	snRNA		12	1	80911477	107
ENSMUSG00000092741	miRNA	Mir3074-1	ENSMUST00000175000	miRNA		13	-1	63301283	85
ENSMUSG00000095475	protein_coding	AC133095.2	ENSMUST00000180208	protein_coding		JH584299.1	-1	913083	1446
ENSMUSG00000088115	misc_RNA	Gm24062	ENSMUST00000157490	misc_RNA		3	1	24718716	266
ENSMUSG00000073572	protein_coding	Gm10542	ENSMUST00000097586	protein_coding	principal1	18	1	44201264	273
ENSMUSG00000095489	snRNA	Gm25737	ENSMUST00000179274	snRNA		6	1	13549506	107
ENSMUSG00000078984	protein_coding	Gm11027	ENSMUST00000090195	protein_coding	principal1	12	1	116275386	198
ENSMUSG00000089375	snoRNA	Snord107	ENSMUST00000158750	snoRNA		7	-1	59980945	70
ENSMUSG00000074302	protein_coding	Gm10663	ENSMUST00000098716	protein_coding	principal1	8	1	65075033	66
ENSMUSG00000080678	miRNA	Gm23334	ENSMUST00000117028	miRNA		19	1	34068931	124
ENSMUSG00000088392	snoRNA	Gm26307	ENSMUST00000157767	snoRNA		16	1	74607757	126
ENSMUSG00000090728	pseudogene	Gm17420	ENSMUST00000164753	pseudogene		5	-1	116032313	153
ENSMUSG00000095787	protein_coding	AC133103.6	ENSMUST00000179124	protein_coding		GL456211.1	-1	54840	372
ENSMUSG00000095410	rRNA	n-R5s121	ENSMUST00000177589	rRNA		8	-1	123574515	119
ENSMUSG00000090863	protein_coding	A530084C06Rik	ENSMUST00000170573	protein_coding	principal1	13	-1	31559333	3200
ENSMUSG00000067122	protein_coding	Gm10198	ENSMUST00000086960	protein_coding	principal1	13	1	111592785	72
ENSMUSG00000077010	miRNA	Gm22189	ENSMUST00000103822	miRNA		12	1	19891976	86
ENSMUSG00000080480	snRNA	Gm23494	ENSMUST00000116830	snRNA		8	-1	98675202	126
ENSMUSG00000075903	snRNA	Gm23941	ENSMUST00000101953	snRNA		3	-1	159916361	107
ENSMUSG00000064840	snRNA	Gm26204	ENSMUST00000082906	snRNA		3	-1	85908459	107
ENSMUSG00000094927	miRNA	Gm24761	ENSMUST00000179589	miRNA		2	1	10482612	127
ENSMUSG00000087707	snoRNA	Gm22999	ENSMUST00000157082	snoRNA		8	1	118726900	88
ENSMUSG00000087845	misc_RNA	Gm25505	ENSMUST00000157220	misc_RNA		5	1	39346691	246
ENSMUSG00000099280	snoRNA	Gm27991	ENSMUST00000184804	snoRNA		7	-1	121040480	137
ENSMUSG00000064961	snoRNA	Gm22704	ENSMUST00000083027	snoRNA		2	1	168335700	137
ENSMUSG00000064586	snRNA	Gm25132	ENSMUST00000082652	snRNA		3	1	55305317	107
ENSMUSG00000065097	snoRNA	Snora16a	ENSMUST00000083163	snoRNA		4	1	132309465	136
ENSMUSG00000077254	snoRNA	Gm26079	ENSMUST00000104066	snoRNA		5	-1	110692181	133
ENSMUSG00000098433	miRNA	Mir6391	ENSMUST00000184391	miRNA		14	-1	118592472	104
ENSMUSG00000084620	misc_RNA	Gm25103	ENSMUST00000122671	misc_RNA		2	1	114270111	318
ENSMUSG00000065539	miRNA	Mir216a	ENSMUST00000083605	miRNA		11	1	28757012	72
ENSMUSG00000096766	snRNA	Gm23793	ENSMUST00000179396	snRNA		10	-1	130557464	117
ENSMUSG00000093025	snRNA	Gm25300	ENSMUST00000175284	snRNA		9	-1	75971027	84
ENSMUSG00000089601	rRNA	Gm22094	ENSMUST00000158976	rRNA		1	-1	118638404	117
ENSMUSG00000076214	miRNA	Mir717	ENSMUST00000102259	miRNA		X	-1	52422515	109
ENSMUSG00000064966	snoRNA	Snord15b	ENSMUST00000083032	snoRNA		7	-1	99479707	145
ENSMUSG00000104608	miRNA	Gm44390	ENSMUST00000197533	miRNA		13	1	22035164	144
ENSMUSG00000105918	miRNA	Gm47278	ENSMUST00000196180	miRNA		7	1	127490842	91
ENSMUSG00000096684	snoRNA	Gm25989	ENSMUST00000158761	snoRNA		16	-1	43886814	133
ENSMUSG00000098430	misc_RNA	Gm27494	ENSMUST00000184735	misc_RNA		2	1	167063016	189
ENSMUSG00000065519	miRNA	Mir10a	ENSMUST00000083585	miRNA		11	1	96317165	110
ENSMUSG00000099237	miRNA	Mir7216	ENSMUST00000185107	miRNA		17	1	27328385	76
ENSMUSG00000080542	snRNA	Gm22710	ENSMUST00000116892	snRNA		1	-1	118459265	125
ENSMUSG00000096352	miRNA	Gm25708	ENSMUST00000177687	miRNA		1	-1	144979585	102
ENSMUSG00000094906	snRNA	Gm23573	ENSMUST00000104408	snRNA		10	1	5357173	107
ENSMUSG00000096512	miRNA	Mir467a-8	ENSMUST00000180070	miRNA		2	1	10495980	83
ENSMUSG00000088792	snoRNA	Gm22539	ENSMUST00000158167	snoRNA		X	1	51844685	117
ENSMUSG00000065096	snRNA	Gm23680	ENSMUST00000083162	snRNA		10	1	12363410	164
ENSMUSG00000087785	snoRNA	Gm23172	ENSMUST00000157160	snoRNA		2	1	128780376	124
ENSMUSG00000064513	snoRNA	Snora9	ENSMUST00000082579	snoRNA		11	-1	6528165	133
ENSMUSG00000088420	snoRNA	Gm22551	ENSMUST00000157795	snoRNA		8	1	18932989	103
ENSMUSG00000098418	snRNA	Gm27723	ENSMUST00000157398	snRNA		10	1	45247087	63
ENSMUSG00000065287	snoRNA	Gm24451	ENSMUST00000083353	snoRNA		2	1	130276237	133
ENSMUSG00000099114	miRNA	Gm27405	ENSMUST00000184201	miRNA		3	1	153313713	112
ENSMUSG00000055216	pseudogene	9430025C20Rik	ENSMUST00000068663	pseudogene		4	-1	3808751	2115
ENSMUSG00000098634	miRNA	Mir8096	ENSMUST00000184526	miRNA		1	1	85751948	127
ENSMUSG00000093090	miRNA	Mir3073a	ENSMUST00000175349	miRNA		12	1	112109238	85
ENSMUSG00000088157	ribozyme	Gm26351	ENSMUST00000157532	ribozyme		X	-1	59081122	232
ENSMUSG00000088236	snRNA	Gm25425	ENSMUST00000157611	snRNA		9	-1	20252888	96
ENSMUSG00000089120	rRNA	Gm26405	ENSMUST00000158495	rRNA		14	1	88126998	100
ENSMUSG00000077425	snoRNA	Gm24280	ENSMUST00000104237	snoRNA		14	1	104971427	134
ENSMUSG00000095666	protein_coding	AC164084.2	ENSMUST00000178466	protein_coding		JH584296.1	-1	44417	1446
ENSMUSG00000078481	protein_coding	Gm10944	ENSMUST00000105564	protein_coding	principal1	10	1	10681348	51
ENSMUSG00000093441	miRNA	Mir5710	ENSMUST00000176884	miRNA		9	1	54708313	69
ENSMUSG00000077042	miRNA	Mir574	ENSMUST00000103854	miRNA		5	1	64970318	78
ENSMUSG00000089060	snRNA	Gm22361	ENSMUST00000158435	snRNA		3	-1	116448564	176
ENSMUSG00000091312	protein_coding	Gm17490	ENSMUST00000166779	protein_coding	principal1	2	-1	11626264	63
ENSMUSG00000088515	snoRNA	Gm23043	ENSMUST00000157890	snoRNA		4	1	51655767	109
ENSMUSG00000077705	rRNA	n-R5s202	ENSMUST00000104517	rRNA		2	-1	112469366	114
ENSMUSG00000070065	miRNA	Mir451a	ENSMUST00000093557	miRNA		11	1	78073170	72
ENSMUSG00000094874	protein_coding	AC132444.3	ENSMUST00000178199	protein_coding		GL456221.1	-1	32306	366
ENSMUSG00000089549	snRNA	Gm25831	ENSMUST00000158924	snRNA		14	-1	97967991	163
ENSMUSG00000088049	misc_RNA	Gm23332	ENSMUST00000157424	misc_RNA		16	1	20445653	275
ENSMUSG00000075525	pseudogene	Gm10849	ENSMUST00000100397	pseudogene		2	-1	14604611	618
ENSMUSG00000066697	pseudogene	Gm10172	ENSMUST00000085929	pseudogene		7	-1	71332921	558
ENSMUSG00000098855	miRNA	Mir6923	ENSMUST00000184592	miRNA		11	1	67099804	72
ENSMUSG00000079190	protein_coding	AC133103.1	ENSMUST00000111360	protein_coding		GL456211.1	1	167446	1473
ENSMUSG00000094199	snRNA	Gm25450	ENSMUST00000179144	snRNA		7	-1	109076242	107
ENSMUSG00000095500	protein_coding	AC132444.5	ENSMUST00000178309	protein_coding		GL456221.1	1	32239	291
ENSMUSG00000072968	protein_coding	Gm17728	ENSMUST00000076982	protein_coding	principal1	17	1	9422060	399
ENSMUSG00000054304	pseudogene	D130007C19Rik	ENSMUST00000067277	pseudogene		4	-1	123903634	1505
ENSMUSG00000089401	rRNA	Gm24880	ENSMUST00000158776	rRNA		7	1	70752416	85
ENSMUSG00000078742	protein_coding	Gm10985	ENSMUST00000108014	protein_coding	principal1	3	1	53845086	81
ENSMUSG00000096756	protein_coding	AC165294.3	ENSMUST00000177719	protein_coding		JH584297.1	-1	111392	1446
ENSMUSG00000077391	snoRNA	Gm24336	ENSMUST00000104203	snoRNA		19	-1	44114124	146
ENSMUSG00000092998	miRNA	Mir5099	ENSMUST00000175257	miRNA		12	1	36816205	74
ENSMUSG00000061654	protein_coding	Spry3	ENSMUST00000076951	protein_coding		GL456233.1	-1	106395	4349
ENSMUSG00000052426	pseudogene	Gm9877	ENSMUST00000064271	pseudogene		10	-1	70288176	2627
ENSMUSG00000094172	protein_coding	AC163611.1	ENSMUST00000177843	protein_coding		JH584299.1	1	562161	1446
ENSMUSG00000053861	protein_coding	Gm9925	ENSMUST00000066583	protein_coding	principal1	18	1	74065102	483
ENSMUSG00000058430	processed_pseudogene	Rpl27a-ps2	ENSMUST00000080234	processed_pseudogene		14	-1	108692643	450
ENSMUSG00000088442	misc_RNA	Gm23553	ENSMUST00000157817	misc_RNA		13	1	9109305	295
ENSMUSG00000074065	pseudogene	Gm10617	ENSMUST00000098368	pseudogene		8	1	117802062	1172
ENSMUSG00000074072	pseudogene	Gm10620	ENSMUST00000098379	pseudogene		8	-1	116765479	1332
ENSMUSG00000088187	misc_RNA	Gm50110	ENSMUST00000157562	misc_RNA		18	1	66676361	319
ENSMUSG00000079010	protein_coding	Gm11032	ENSMUST00000109941	protein_coding	principal1	11	1	4620067	102
ENSMUSG00000089545	misc_RNA	Gm25838	ENSMUST00000158920	misc_RNA		19	1	38885242	120
ENSMUSG00000080356	miRNA	Mir1247	ENSMUST00000116706	miRNA		12	-1	110278129	82
ENSMUSG00000094432	miRNA	Gm23616	ENSMUST00000177797	miRNA		5	1	104297188	110
ENSMUSG00000091768	protein_coding	Gm17617	ENSMUST00000164344	protein_coding	principal1	13	-1	55133548	39
ENSMUSG00000095450	protein_coding	AC132444.4	ENSMUST00000179292	protein_coding		GL456221.1	-1	46666	372
ENSMUSG00000073809	pseudogene	Gm10583	ENSMUST00000097988	pseudogene		4	-1	88758570	396
ENSMUSG00000088068	snRNA	Gm47290	ENSMUST00000157443	snRNA		12	1	70673646	101
ENSMUSG00000098767	misc_RNA	Gm27755	ENSMUST00000184623	misc_RNA		6	1	17693426	132
ENSMUSG00000091585	protein_coding	AC140365.1	ENSMUST00000165454	protein_coding		JH584299.1	1	716296	1500
ENSMUSG00000098317	miRNA	Mir6926	ENSMUST00000184562	miRNA		11	-1	74868194	68
ENSMUSG00000065341	snRNA	Gm25579	ENSMUST00000083407	snRNA		7	-1	126567149	106
ENSMUSG00000094722	protein_coding	AC125178.1	ENSMUST00000180291	protein_coding		JH584298.1	1	90528	1446
ENSMUSG00000091159	protein_coding	Gm17545	ENSMUST00000168332	protein_coding	principal1	9	1	22454290	72
ENSMUSG00000088605	rRNA	Gm24188	ENSMUST00000157980	rRNA		9	-1	35503695	108
ENSMUSG00000095320	protein_coding	Ccl21a	ENSMUST00000178919	protein_coding		JH584294.1	-1	121713	402
ENSMUSG00000092850	miRNA	Mir344g	ENSMUST00000175109	miRNA		7	-1	61982359	71
ENSMUSG00000065452	miRNA	Mir207	ENSMUST00000083518	miRNA		4	1	40722917	79
ENSMUSG00000077317	snRNA	Gm25785	ENSMUST00000104129	snRNA		18	-1	51607668	125
ENSMUSG00000088860	miRNA	Mir1947	ENSMUST00000158235	miRNA		16	1	33105361	85
ENSMUSG00000078953	protein_coding	Gm11020	ENSMUST00000109447	protein_coding	principal1	8	1	104321567	186
ENSMUSG00000079774	protein_coding	Fam205a2	ENSMUST00000115912	protein_coding		GL456350.1	-1	149877	4130
ENSMUSG00000088259	misc_RNA	Gm24290	ENSMUST00000157634	misc_RNA		11	1	105141214	96
ENSMUSG00000074735	protein_coding	Gm21994	ENSMUST00000063463	protein_coding	principal1	2	-1	150255591	990
ENSMUSG00000089287	snoRNA	Gm22944	ENSMUST00000158662	snoRNA		3	-1	4567335	133
ENSMUSG00000095247	protein_coding	Ccl27a	ENSMUST00000179008	protein_coding		JH584293.1	-1	21820	261
ENSMUSG00000099069	miRNA	Mir8090	ENSMUST00000185078	miRNA		19	-1	47755157	136
ENSMUSG00000080425	snRNA	Gm24833	ENSMUST00000116775	snRNA		15	-1	37603534	120
ENSMUSG00000074467	pseudogene	Gm10702	ENSMUST00000098929	pseudogene		3	1	89353629	1268
ENSMUSG00000096402	snoRNA	Gm23816	ENSMUST00000179617	snoRNA		14	-1	62635093	132
ENSMUSG00000095453	rRNA	n-R5s149	ENSMUST00000178520	rRNA		8	-1	123622046	119
ENSMUSG00000087782	snRNA	Gm23169	ENSMUST00000157157	snRNA		1	-1	13334609	112
ENSMUSG00000076137	miRNA	Gm26384	ENSMUST00000102183	miRNA		17	-1	21284212	110
ENSMUSG00000077278	snoRNA	Gm22778	ENSMUST00000104090	snoRNA		13	1	91723256	128
ENSMUSG00000064556	snoRNA	Gm24625	ENSMUST00000082622	snoRNA		14	1	62521023	130
ENSMUSG00000066936	protein_coding	Gm10188	ENSMUST00000086544	protein_coding	principal1	1	-1	132229767	720
ENSMUSG00000096342	snRNA	Gm22885	ENSMUST00000157410	snRNA		16	-1	36162121	107
ENSMUSG00000074485	processed_pseudogene	Gm7381	ENSMUST00000098958	processed_pseudogene		8	-1	3842395	300
ENSMUSG00000046388	pseudogene	Gm9806	ENSMUST00000051080	pseudogene		19	1	16780547	552
ENSMUSG00000095671	snoRNA	Gm25098	ENSMUST00000177580	snoRNA		7	-1	59492510	79
ENSMUSG00000092814	miRNA	Gm23638	ENSMUST00000175073	miRNA		2	-1	18129577	126
ENSMUSG00000096385	protein_coding	Gm11168	ENSMUST00000177722	protein_coding	principal5	9	1	3003346	684
ENSMUSG00000065530	miRNA	Mir99a	ENSMUST00000083596	miRNA		16	1	77598936	65
ENSMUSG00000089398	misc_RNA	Gm23028	ENSMUST00000158773	misc_RNA		X	1	66448166	265
ENSMUSG00000065894	rRNA	n-R5s46	ENSMUST00000083960	rRNA		14	-1	36856044	116
ENSMUSG00000080561	miRNA	Gm26042	ENSMUST00000116911	miRNA		1	1	165024345	112
ENSMUSG00000077378	snoRNA	Gm25169	ENSMUST00000104190	snoRNA		8	1	7638764	129
ENSMUSG00000097704	protein_coding	Gm26741	ENSMUST00000180473	protein_coding	principal1	10	1	52358767	87
ENSMUSG00000065527	miRNA	Mir93	ENSMUST00000083593	miRNA		5	-1	138165610	88
ENSMUSG00000088063	snRNA	Gm24477	ENSMUST00000157438	snRNA		2	1	166768745	103
ENSMUSG00000094383	protein_coding	AC123873.1	ENSMUST00000168953	protein_coding		JH584299.1	1	90482	1482
ENSMUSG00000099235	misc_RNA	Gm27882	ENSMUST00000184904	misc_RNA		5	-1	112216813	74
ENSMUSG00000096100	protein_coding	AC133103.7	ENSMUST00000179890	protein_coding		GL456211.1	1	66955	372
ENSMUSG00000089033	snoRNA	Gm22163	ENSMUST00000158408	snoRNA		16	-1	74059033	135
ENSMUSG00000096385	protein_coding	Gm11168	ENSMUST00000178077	protein_coding	alternative2	9	1	3003580	684
ENSMUSG00000094159	miRNA	Mir467a-5	ENSMUST00000179352	miRNA		2	1	10488599	83
ENSMUSG00000093046	miRNA	Mir3081	ENSMUST00000175305	miRNA		16	-1	44558129	84
ENSMUSG00000088530	snoRNA	Gm23280	ENSMUST00000157905	snoRNA		X	1	76830034	139
ENSMUSG00000098345	miRNA	Gm27847	ENSMUST00000183711	miRNA		9	1	112489616	107
ENSMUSG00000053706	protein_coding	B430305J03Rik	ENSMUST00000066298	protein_coding	principal1	3	-1	61365951	3702
ENSMUSG00000077736	snoRNA	Gm24555	ENSMUST00000104548	snoRNA		1	1	83921918	124
ENSMUSG00000089583	rRNA	Gm23342	ENSMUST00000158958	rRNA		12	-1	29035294	115
ENSMUSG00000094250	processed_pseudogene	Gm4479	ENSMUST00000178807	processed_pseudogene		14	-1	56787687	171
ENSMUSG00000096385	protein_coding	Gm11168	ENSMUST00000178348	protein_coding	alternative2	9	1	3004457	672
ENSMUSG00000099157	misc_RNA	Gm27804	ENSMUST00000185135	misc_RNA		18	1	38594365	119
ENSMUSG00000089125	snRNA	Gm26403	ENSMUST00000158500	snRNA		18	-1	61138613	105
ENSMUSG00000095491	snoRNA	Gm24088	ENSMUST00000179100	snoRNA		7	-1	59411011	79
ENSMUSG00000065384	snRNA	Gm23093	ENSMUST00000083450	snRNA		11	1	18738695	102
ENSMUSG00000088541	snoRNA	Gm24963	ENSMUST00000157916	snoRNA		3	-1	17251444	144
ENSMUSG00000095247	protein_coding	Ccl27a	ENSMUST00000179281	protein_coding		JH584293.1	-1	17556	363
ENSMUSG00000088910	snRNA	Gm22608	ENSMUST00000158285	snRNA		11	1	68908020	103
ENSMUSG00000096734	protein_coding	Gm21836	ENSMUST00000178787	protein_coding	principal1	9	-1	124493793	63
ENSMUSG00000094576	protein_coding	AC087559.3	ENSMUST00000179935	protein_coding		GL456350.1	-1	25222	1422
ENSMUSG00000096519	protein_coding	Gm10721	ENSMUST00000143083	protein_coding	principal1	9	1	3013140	669
ENSMUSG00000075014	protein_coding	Gm10800	ENSMUST00000099683	protein_coding	principal1	2	-1	98667301	660
ENSMUSG00000096385	protein_coding	Gm11168	ENSMUST00000179881	protein_coding	alternative2	9	1	3005159	672
ENSMUSG00000098376	miRNA	Mir6907	ENSMUST00000183764	miRNA		10	-1	78408545	71
ENSMUSG00000088583	snRNA	Gm22965	ENSMUST00000157958	snRNA		5	1	122506789	101
ENSMUSG00000077217	snoRNA	Gm23951	ENSMUST00000104029	snoRNA		11	-1	83367001	132
ENSMUSG00000088412	snoRNA	Gm24241	ENSMUST00000157787	snoRNA		10	-1	92689008	145
ENSMUSG00000064577	snRNA	Gm25799	ENSMUST00000082643	snRNA		11	1	34899017	107
ENSMUSG00000098285	miRNA	Mir7670	ENSMUST00000183689	miRNA		6	1	38507325	69
ENSMUSG00000076140	miRNA	Mir542	ENSMUST00000102186	miRNA		X	-1	53049487	85
ENSMUSG00000064714	rRNA	n-R5s62	ENSMUST00000082780	rRNA		12	1	82150468	96
ENSMUSG00000065737	snRNA	Gm24490	ENSMUST00000083803	snRNA		8	1	86292501	98
ENSMUSG00000098526	misc_RNA	Gm27366	ENSMUST00000184967	misc_RNA		10	-1	92135070	108
ENSMUSG00000052005	pseudogene	Gm9864	ENSMUST00000090043	pseudogene		2	-1	107600539	1656
ENSMUSG00000084517	snoRNA	Gm22480	ENSMUST00000122568	snoRNA		3	1	49491351	128
ENSMUSG00000088339	snRNA	Gm22850	ENSMUST00000157714	snRNA		4	1	39865687	82
ENSMUSG00000094473	snRNA	Gm25935	ENSMUST00000178746	snRNA		17	-1	93246814	107
ENSMUSG00000094121	protein_coding	Ccl21c	ENSMUST00000177695	protein_coding		GL456350.1	-1	1059	402
ENSMUSG00000092887	snoRNA	Snord53	ENSMUST00000175146	snoRNA		17	1	71640879	78
ENSMUSG00000099240	misc_RNA	Gm27539	ENSMUST00000184971	misc_RNA		7	1	143293932	224
ENSMUSG00000095247	protein_coding	Ccl27a	ENSMUST00000179871	protein_coding		JH584293.1	-1	21525	408
ENSMUSG00000064440	snoRNA	Gm26224	ENSMUST00000082506	snoRNA		1	1	161035394	80
ENSMUSG00000088470	misc_RNA	Gm23081	ENSMUST00000157845	misc_RNA		13	1	13402836	297
ENSMUSG00000088192	snoRNA	Gm23904	ENSMUST00000157567	snoRNA		8	1	86233854	124
ENSMUSG00000064624	snRNA	Gm22305	ENSMUST00000082690	snRNA		8	-1	86671343	108
ENSMUSG00000099076	miRNA	Mir7070	ENSMUST00000183657	miRNA		8	1	85062086	86
ENSMUSG00000070227	snRNA	Gm24704	ENSMUST00000093715	snRNA		3	1	24562074	107
ENSMUSG00000065617	miRNA	Mir323	ENSMUST00000083683	miRNA		12	1	109712508	86
ENSMUSG00000077998	miRNA	Mir466f-2	ENSMUST00000104805	miRNA		2	1	10468675	94
ENSMUSG00000099081	misc_RNA	Gm27624	ENSMUST00000185047	misc_RNA		11	-1	3644952	177
ENSMUSG00000087857	snoRNA	Gm22791	ENSMUST00000157232	snoRNA		18	-1	46985481	145
ENSMUSG00000092807	miRNA	Mir199b	ENSMUST00000175066	miRNA		2	1	32318460	110
ENSMUSG00000093261	miRNA	Gm23416	ENSMUST00000175520	miRNA		15	1	87068993	95
ENSMUSG00000065013	snoRNA	Gm23508	ENSMUST00000083079	snoRNA		12	1	109653033	72
ENSMUSG00000064659	snRNA	Gm26131	ENSMUST00000082725	snRNA		X	1	22861936	110
ENSMUSG00000087994	snoRNA	Gm25055	ENSMUST00000157369	snoRNA		10	-1	58704651	76
ENSMUSG00000088285	snRNA	Gm23589	ENSMUST00000157660	snRNA		4	-1	108998706	105
ENSMUSG00000087850	snoRNA	Gm22792	ENSMUST00000157225	snoRNA		6	-1	144803632	133
ENSMUSG00000098296	miRNA	Mir6918	ENSMUST00000183479	miRNA		11	1	4891345	58
ENSMUSG00000099326	miRNA	Mir21c	ENSMUST00000184910	miRNA		8	-1	128278225	78
ENSMUSG00000089522	misc_RNA	Gm22326	ENSMUST00000158897	misc_RNA		7	-1	74962697	351
ENSMUSG00000105814	miRNA	Mir703	ENSMUST00000197105	miRNA		5	-1	98475664	109
ENSMUSG00000094896	snRNA	Gm22287	ENSMUST00000083197	snRNA		X	1	60257552	107
ENSMUSG00000076138	miRNA	Gm26377	ENSMUST00000102184	miRNA		9	-1	78478635	108
ENSMUSG00000084539	misc_RNA	Gm25842	ENSMUST00000122590	misc_RNA		9	1	102991895	322
ENSMUSG00000077749	snoRNA	Gm26341	ENSMUST00000104561	snoRNA		10	1	35112198	134
ENSMUSG00000088621	snoRNA	Gm23033	ENSMUST00000157996	snoRNA		15	-1	29888474	134
ENSMUSG00000106221	miRNA	Gm47301	ENSMUST00000199807	miRNA		4	1	149817764	60
ENSMUSG00000088999	snoRNA	Gm22763	ENSMUST00000158374	snoRNA		6	1	123954883	107
ENSMUSG00000080680	miRNA	Gm23989	ENSMUST00000117030	miRNA		12	1	89431336	66
ENSMUSG00000098407	miRNA	Mir6348	ENSMUST00000183804	miRNA		1	1	168490643	120
ENSMUSG00000065251	snRNA	Gm23971	ENSMUST00000083317	snRNA		11	-1	101645930	191
ENSMUSG00000098443	miRNA	Mir7681	ENSMUST00000184834	miRNA		1	1	53849424	72
ENSMUSG00000089021	snRNA	Gm25012	ENSMUST00000158396	snRNA		14	1	40009902	164
ENSMUSG00000079740	protein_coding	Gm11172	ENSMUST00000115822	protein_coding	principal1	16	1	10812915	63
ENSMUSG00000096704	snRNA	Gm24805	ENSMUST00000082931	snRNA		19	-1	47714887	104
ENSMUSG00000088546	misc_RNA	Gm25981	ENSMUST00000157921	misc_RNA		3	1	13845686	295
ENSMUSG00000087896	snRNA	Gm25282	ENSMUST00000157271	snRNA		7	1	75668873	84
ENSMUSG00000095255	miRNA	Gm23086	ENSMUST00000116935	miRNA		13	1	42624994	91
ENSMUSG00000077499	snoRNA	Gm23604	ENSMUST00000104311	snoRNA		8	-1	45581747	132
ENSMUSG00000065061	snoRNA	Gm22884	ENSMUST00000083127	snoRNA		11	1	55482694	140
ENSMUSG00000088026	misc_RNA	Gm22143	ENSMUST00000157401	misc_RNA		X	1	132681887	203
ENSMUSG00000096193	miRNA	Gm26134	ENSMUST00000178484	miRNA		1	1	98549451	110
ENSMUSG00000065381	snRNA	Gm23096	ENSMUST00000083447	snRNA		3	1	49658763	107
ENSMUSG00000087834	rRNA	Gm23957	ENSMUST00000157209	rRNA		7	-1	66370481	90
ENSMUSG00000099304	miRNA	Gm27420	ENSMUST00000183823	miRNA		2	1	148053124	79
ENSMUSG00000088594	snoRNA	Gm23965	ENSMUST00000157969	snoRNA		1	-1	103236767	142
ENSMUSG00000065412	miRNA	Mir29b-2	ENSMUST00000083478	miRNA		1	1	195037040	81
ENSMUSG00000087930	snoRNA	Gm26048	ENSMUST00000157305	snoRNA		1	1	140003825	142
ENSMUSG00000094386	snoRNA	Gm25066	ENSMUST00000158145	snoRNA		5	1	87733528	123
ENSMUSG00000092907	miRNA	Mir5132	ENSMUST00000175166	miRNA		X	-1	74023598	71
ENSMUSG00000088096	snRNA	Gm23672	ENSMUST00000157471	snRNA		1	-1	144609110	107
ENSMUSG00000104700	snoRNA	Gm26379	ENSMUST00000200225	snoRNA		4	1	74635219	132
ENSMUSG00000077040	miRNA	Gm26209	ENSMUST00000103852	miRNA		X	-1	130887778	110
ENSMUSG00000087819	snoRNA	Gm25117	ENSMUST00000157194	snoRNA		10	1	111481493	144
ENSMUSG00000089253	snRNA	Gm25716	ENSMUST00000158628	snRNA		14	-1	61343067	104
ENSMUSG00000089085	snRNA	Gm24004	ENSMUST00000158460	snRNA		9	1	95934613	178
ENSMUSG00000075958	snRNA	Gm23423	ENSMUST00000082782	snRNA		4	1	9210003	106
ENSMUSG00000094962	protein_coding	Gm21954	ENSMUST00000179544	protein_coding	principal1	3	-1	55472210	51
ENSMUSG00000095021	snoRNA	Gm24021	ENSMUST00000178435	snoRNA		7	-1	59563423	79
ENSMUSG00000084442	snRNA	Gm26253	ENSMUST00000122493	snRNA		11	-1	20194735	103
ENSMUSG00000098691	miRNA	Gm27317	ENSMUST00000183533	miRNA		6	-1	85743609	95
ENSMUSG00000094506	miRNA	Gm26229	ENSMUST00000179699	miRNA		2	1	10487704	121
ENSMUSG00000064751	snoRNA	Gm26330	ENSMUST00000082817	snoRNA		4	-1	117155289	104
ENSMUSG00000065248	snoRNA	Gm22293	ENSMUST00000083314	snoRNA		3	1	128540372	109
ENSMUSG00000095547	protein_coding	Gm10719	ENSMUST00000099049	protein_coding	alternative2	9	1	3017408	675
ENSMUSG00000077427	snoRNA	Gm24278	ENSMUST00000104239	snoRNA		9	-1	39537952	127
ENSMUSG00000092774	rRNA	Gm26197	ENSMUST00000175033	rRNA		14	-1	78311340	115
ENSMUSG00000098611	miRNA	Mir6343	ENSMUST00000183584	miRNA		1	1	76509560	84
ENSMUSG00000076010	miRNA	Mir615	ENSMUST00000102056	miRNA		15	1	103014910	92
ENSMUSG00000088098	snoRNA	Gm23674	ENSMUST00000157473	snoRNA		18	1	26495435	131
ENSMUSG00000077783	snRNA	Gm23907	ENSMUST00000104595	snRNA		15	1	65694549	189
ENSMUSG00000065204	snoRNA	Gm24610	ENSMUST00000083270	snoRNA		19	1	46359036	109
ENSMUSG00000076050	miRNA	Mir450b	ENSMUST00000102095	miRNA		X	-1	53048078	82
ENSMUSG00000099286	miRNA	Mir7235	ENSMUST00000183796	miRNA		11	-1	97146419	56
ENSMUSG00000095547	protein_coding	Gm10719	ENSMUST00000179272	protein_coding	alternative2	9	1	3018753	675
ENSMUSG00000099073	misc_RNA	Gm27568	ENSMUST00000184220	misc_RNA		6	1	30735964	99
ENSMUSG00000089052	snoRNA	Gm23351	ENSMUST00000158427	snoRNA		13	1	31427255	125
ENSMUSG00000077422	snoRNA	Gm24281	ENSMUST00000104234	snoRNA		X	1	157430604	136
ENSMUSG00000076395	miRNA	Gm25990	ENSMUST00000102440	miRNA		15	1	82408458	86
ENSMUSG00000077642	snoRNA	Gm24984	ENSMUST00000104454	snoRNA		10	1	72527550	133
ENSMUSG00000077506	snoRNA	Scarna9	ENSMUST00000104318	snoRNA		9	-1	15326333	70
ENSMUSG00000088959	snRNA	Gm24947	ENSMUST00000158334	snRNA		6	1	125884415	110
ENSMUSG00000096082	snoRNA	Gm24711	ENSMUST00000178062	snoRNA		7	-1	59721218	94
ENSMUSG00000063656	protein_coding	Gm10135	ENSMUST00000043711	protein_coding	principal1	5	-1	72974702	252
ENSMUSG00000088617	misc_RNA	Gm22484	ENSMUST00000157992	misc_RNA		18	-1	55987527	306
ENSMUSG00000065208	snoRNA	Gm24616	ENSMUST00000083274	snoRNA		16	1	23111617	139
ENSMUSG00000093914	miRNA	Gm22166	ENSMUST00000178419	miRNA		2	1	10497548	121
ENSMUSG00000065678	snRNA	Gm24261	ENSMUST00000083744	snRNA		13	1	100604359	104
ENSMUSG00000076399	miRNA	Mir450-2	ENSMUST00000102444	miRNA		X	-1	53048367	69
ENSMUSG00000096305	snoRNA	Gm23047	ENSMUST00000177661	snoRNA		7	-1	59733863	94
ENSMUSG00000088353	snRNA	Gm24014	ENSMUST00000157728	snRNA		1	1	57467870	157
ENSMUSG00000098676	miRNA	Mir6359	ENSMUST00000183668	miRNA		18	1	88972030	81
ENSMUSG00000087744	miRNA	Gm25149	ENSMUST00000157119	miRNA		9	-1	70799637	82
ENSMUSG00000088440	snoRNA	Gm23555	ENSMUST00000157815	snoRNA		18	1	56192999	135
ENSMUSG00000093000	miRNA	Gm24155	ENSMUST00000175259	miRNA		3	1	118434721	110
ENSMUSG00000098359	miRNA	Mir7649	ENSMUST00000184433	miRNA		6	-1	128974895	56
ENSMUSG00000080370	snoRNA	Gm22952	ENSMUST00000116720	snoRNA		4	-1	56762041	120
ENSMUSG00000084496	misc_RNA	Gm22514	ENSMUST00000122547	misc_RNA		10	-1	78370320	308
ENSMUSG00000098772	miRNA	Gm27441	ENSMUST00000185000	miRNA		14	-1	97049585	105
ENSMUSG00000098518	misc_RNA	Gm27668	ENSMUST00000184188	misc_RNA		4	1	47603889	120
ENSMUSG00000080437	snRNA	Gm24274	ENSMUST00000116787	snRNA		8	-1	67213419	124
ENSMUSG00000095857	snRNA	Gm22618	ENSMUST00000179376	snRNA		5	-1	50290486	107
ENSMUSG00000084611	misc_RNA	Gm24371	ENSMUST00000122662	misc_RNA		4	1	32514787	267
ENSMUSG00000088957	snRNA	Gm24946	ENSMUST00000158332	snRNA		3	1	63488993	106
ENSMUSG00000093336	miRNA	Mir1954	ENSMUST00000175595	miRNA		2	1	32652329	86
ENSMUSG00000078129	protein_coding	Actl10	ENSMUST00000104928	protein_coding	principal1	2	1	154551776	1501
ENSMUSG00000096017	snoRNA	Gm26502	ENSMUST00000177732	snoRNA		7	-1	59756607	94
ENSMUSG00000077439	snoRNA	Gm22594	ENSMUST00000104251	snoRNA		10	1	66483553	130
ENSMUSG00000084560	snRNA	Gm26478	ENSMUST00000122611	snRNA		2	-1	11087913	133
ENSMUSG00000095547	protein_coding	Gm10719	ENSMUST00000099047	protein_coding	principal5	9	1	3020155	681
ENSMUSG00000098929	miRNA	Mir6400	ENSMUST00000184870	miRNA		4	-1	15942991	92
ENSMUSG00000065192	snRNA	Gm23460	ENSMUST00000083258	snRNA		1	-1	52444544	109
ENSMUSG00000080668	miRNA	Gm24999	ENSMUST00000117018	miRNA		13	1	60293672	101
ENSMUSG00000064409	rRNA	n-R5s40	ENSMUST00000082475	rRNA		15	1	79692502	124
ENSMUSG00000088448	rRNA	Gm23558	ENSMUST00000157823	rRNA		12	-1	97371113	80
ENSMUSG00000064766	snoRNA	Gm26458	ENSMUST00000082832	snoRNA		11	-1	11427512	128
ENSMUSG00000088407	snRNA	Gm25884	ENSMUST00000157782	snRNA		10	1	92486818	62
ENSMUSG00000098351	misc_RNA	Gm27507	ENSMUST00000184199	misc_RNA		1	1	74764798	93
ENSMUSG00000094801	rRNA	n-R5s113	ENSMUST00000179143	rRNA		8	-1	123561006	119
ENSMUSG00000065422	miRNA	Mir221	ENSMUST00000083488	miRNA		X	-1	19146388	95
ENSMUSG00000095059	snRNA	Gm25670	ENSMUST00000178423	snRNA		14	-1	110597722	107
ENSMUSG00000087992	snoRNA	Gm25059	ENSMUST00000157367	snoRNA		9	-1	113776298	117
ENSMUSG00000076253	miRNA	Mir680-3	ENSMUST00000102298	miRNA		12	-1	35194897	87
ENSMUSG00000088820	snoRNA	Gm25224	ENSMUST00000158195	snoRNA		12	1	109689477	68
ENSMUSG00000089078	snRNA	Gm24502	ENSMUST00000158453	snRNA		5	-1	75561150	105
ENSMUSG00000084742	rRNA	n-R5s19	ENSMUST00000122793	rRNA		19	1	6144732	120
ENSMUSG00000094710	snRNA	Gm22823	ENSMUST00000179754	snRNA		14	1	41247686	107
ENSMUSG00000065604	miRNA	Mir29b-1	ENSMUST00000083670	miRNA		6	-1	31063093	71
ENSMUSG00000077392	snoRNA	Gm24337	ENSMUST00000104204	snoRNA		4	-1	5687802	126
ENSMUSG00000098849	miRNA	Gm27892	ENSMUST00000185017	miRNA		X	-1	25679520	106
ENSMUSG00000066620	processed_pseudogene	Gm4883	ENSMUST00000085702	processed_pseudogene		7	1	30709736	528
ENSMUSG00000088661	snRNA	Gm25334	ENSMUST00000158036	snRNA		19	1	4904673	110
ENSMUSG00000092765	miRNA	Gm23363	ENSMUST00000175024	miRNA		2	1	32318265	79
ENSMUSG00000088126	snoRNA	Gm22870	ENSMUST00000157501	snoRNA		18	1	30476407	112
ENSMUSG00000084612	rRNA	n-R5s6	ENSMUST00000122663	rRNA		X	1	49879307	88
ENSMUSG00000088710	snRNA	Gm22730	ENSMUST00000158085	snRNA		8	1	127046912	171
ENSMUSG00000094150	snoRNA	Gm23265	ENSMUST00000178321	snoRNA		7	-1	59726254	94
ENSMUSG00000080601	miRNA	Gm23841	ENSMUST00000116951	miRNA		5	-1	67053792	114
ENSMUSG00000089187	miRNA	Gm22949	ENSMUST00000158562	miRNA		14	-1	49573318	105
ENSMUSG00000076337	miRNA	Gm24714	ENSMUST00000102382	miRNA		11	-1	16645538	101
ENSMUSG00000088002	snRNA	Gm24775	ENSMUST00000157377	snRNA		12	1	77393104	99
ENSMUSG00000087909	misc_RNA	Gm22035	ENSMUST00000157284	misc_RNA		13	-1	38898587	228
ENSMUSG00000064926	snRNA	Gm22044	ENSMUST00000082992	snRNA		8	-1	79014470	107
ENSMUSG00000105118	miRNA	Mir3084-2	ENSMUST00000199618	miRNA		19	-1	60774397	69
ENSMUSG00000098414	miRNA	Mir6909	ENSMUST00000184212	miRNA		10	-1	79531090	62
ENSMUSG00000076387	miRNA	Mir671	ENSMUST00000102432	miRNA		5	1	24592114	98
ENSMUSG00000076959	miRNA	Mir669l	ENSMUST00000103771	miRNA		2	1	10468971	98
ENSMUSG00000093900	miRNA	Mir669p-2	ENSMUST00000103868	miRNA		2	1	10496497	87
ENSMUSG00000088623	snRNA	Gm23031	ENSMUST00000157998	snRNA		5	1	92302174	119
ENSMUSG00000077971	miRNA	Gm26259	ENSMUST00000104778	miRNA		13	-1	5997551	97
ENSMUSG00000077518	snRNA	Gm25879	ENSMUST00000104330	snRNA		2	1	181662306	107
ENSMUSG00000065055	rRNA	n-R5s213	ENSMUST00000083121	rRNA		1	1	82635013	98
ENSMUSG00000088283	snRNA	Gm23587	ENSMUST00000157658	snRNA		16	-1	88614610	84
ENSMUSG00000065203	snRNA	Gm24614	ENSMUST00000083269	snRNA		3	1	8429158	107
ENSMUSG00000077246	snoRNA	Gm23273	ENSMUST00000104058	snoRNA		6	1	35975330	135
ENSMUSG00000076450	miRNA	Mir804	ENSMUST00000103251	miRNA		11	-1	50357879	95
ENSMUSG00000089037	snoRNA	Gm22159	ENSMUST00000158412	snoRNA		1	-1	109623137	130
ENSMUSG00000095272	snRNA	Gm24242	ENSMUST00000179440	snRNA		5	-1	151700308	107
ENSMUSG00000087777	snRNA	Gm22321	ENSMUST00000157152	snRNA		6	-1	33088749	104
ENSMUSG00000094218	snoRNA	Gm23446	ENSMUST00000177977	snoRNA		7	-1	59766704	94
ENSMUSG00000089066	snRNA	Gm22836	ENSMUST00000158441	snRNA		9	-1	82439474	61
ENSMUSG00000089083	snRNA	Rnu7	ENSMUST00000158458	snRNA		6	-1	124741286	62
ENSMUSG00000077224	snoRNA	Gm23437	ENSMUST00000104036	snoRNA		14	1	106766030	127
ENSMUSG00000077481	snoRNA	Gm25272	ENSMUST00000104293	snoRNA		14	1	123933718	128
ENSMUSG00000096142	miRNA	Gm25817	ENSMUST00000177758	miRNA		7	1	32917146	121
ENSMUSG00000093937	snoRNA	Gm25528	ENSMUST00000180264	snoRNA		9	-1	87888587	132
ENSMUSG00000064762	snRNA	Gm23738	ENSMUST00000082828	snRNA		4	1	68182532	171
ENSMUSG00000094041	miRNA	Gm28019	ENSMUST00000178138	miRNA		8	-1	72541580	101
ENSMUSG00000087908	snoRNA	Gm22034	ENSMUST00000157283	snoRNA		1	-1	102953548	134
ENSMUSG00000095422	snRNA	Gm24415	ENSMUST00000180218	snRNA		15	-1	90054515	107
ENSMUSG00000096804	snRNA	Gm23411	ENSMUST00000157988	snRNA		18	-1	34188939	62
ENSMUSG00000092644	miRNA	Gm23564	ENSMUST00000174903	miRNA		11	1	84893087	67
ENSMUSG00000080545	snRNA	Gm22713	ENSMUST00000116895	snRNA		3	-1	123391243	130
ENSMUSG00000065635	snoRNA	Gm24253	ENSMUST00000083701	snoRNA		11	-1	56263240	76
ENSMUSG00000092671	miRNA	Gm24103	ENSMUST00000174930	miRNA		8	-1	111042024	77
ENSMUSG00000064916	snRNA	Gm22573	ENSMUST00000082982	snRNA		4	-1	155720141	102
ENSMUSG00000088472	snoRNA	Gm23079	ENSMUST00000157847	snoRNA		6	-1	123808221	117
ENSMUSG00000077537	snoRNA	Gm22544	ENSMUST00000104349	snoRNA		8	-1	76022055	127
ENSMUSG00000088146	scaRNA	Gm24718	ENSMUST00000157521	scaRNA		X	-1	96150972	136
ENSMUSG00000099247	miRNA	Gm27541	ENSMUST00000184078	miRNA		10	1	78525989	122
ENSMUSG00000070209	rRNA	n-R5s27	ENSMUST00000093699	rRNA		17	-1	44641143	119
ENSMUSG00000070072	miRNA	Mir433	ENSMUST00000093564	miRNA		12	1	109591715	124
ENSMUSG00000098788	snRNA	Gm27342	ENSMUST00000183530	snRNA		13	1	32758202	109
ENSMUSG00000065716	snoRNA	Gm25651	ENSMUST00000083782	snoRNA		X	-1	169695899	119
ENSMUSG00000094086	miRNA	Gm23992	ENSMUST00000174981	miRNA		9	-1	4371335	67
ENSMUSG00000088988	rRNA	Gm25606	ENSMUST00000158363	rRNA		9	1	64048496	95
ENSMUSG00000076143	miRNA	Mir708	ENSMUST00000102189	miRNA		7	1	96249424	109
ENSMUSG00000064889	snRNA	Gm24200	ENSMUST00000082955	snRNA		9	1	94284496	157
ENSMUSG00000076033	miRNA	Mir692-3	ENSMUST00000102079	miRNA		13	1	74407065	109
ENSMUSG00000065733	snRNA	Gm24491	ENSMUST00000083799	snRNA		X	-1	106650019	107
ENSMUSG00000064621	snoRNA	Gm26922	ENSMUST00000082687	snoRNA		12	1	109654627	72
ENSMUSG00000095198	miRNA	Mir467a-3	ENSMUST00000178082	miRNA		2	1	10483678	83
ENSMUSG00000099003	miRNA	Mir7035	ENSMUST00000184713	miRNA		5	1	136105522	82
ENSMUSG00000096835	miRNA	Gm23288	ENSMUST00000179213	miRNA		2	1	10490167	121
ENSMUSG00000088069	misc_RNA	Gm23250	ENSMUST00000157444	misc_RNA		4	1	46118180	267
ENSMUSG00000096241	snRNA	Gm24267	ENSMUST00000179841	snRNA		1	-1	107756708	107
ENSMUSG00000104914	miRNA	Mir7061	ENSMUST00000198082	miRNA		7	1	130908268	68
ENSMUSG00000089190	snoRNA	Gm25771	ENSMUST00000158565	snoRNA		1	1	122553173	144
ENSMUSG00000095023	snRNA	Gm24019	ENSMUST00000178620	snRNA		10	1	79909195	107
ENSMUSG00000070080	miRNA	Mir431	ENSMUST00000093572	miRNA		12	1	109590447	91
ENSMUSG00000076127	miRNA	Mir718	ENSMUST00000102173	miRNA		X	-1	74023936	88
ENSMUSG00000084653	snRNA	Gm26091	ENSMUST00000122704	snRNA		3	-1	104601239	82
ENSMUSG00000088394	snRNA	Gm26312	ENSMUST00000157769	snRNA		X	1	56725073	165
ENSMUSG00000098757	miRNA	Gm27313	ENSMUST00000183500	miRNA		12	-1	89298583	142
ENSMUSG00000106147	snoRNA	Rnu3a	ENSMUST00000196710	snoRNA		10	1	40258467	213
ENSMUSG00000065111	snRNA	Gm25141	ENSMUST00000083177	snRNA		15	-1	102627885	107
ENSMUSG00000088242	scaRNA	Gm25913	ENSMUST00000157617	scaRNA		12	1	31858458	135
ENSMUSG00000087800	snoRNA	Gm25569	ENSMUST00000157175	snoRNA		2	-1	165270176	131
ENSMUSG00000096298	miRNA	Gm23931	ENSMUST00000103842	miRNA		19	-1	13605107	109
ENSMUSG00000076382	miRNA	Gm23193	ENSMUST00000102427	miRNA		8	1	111194964	82
ENSMUSG00000089485	misc_RNA	Gm24734	ENSMUST00000158860	misc_RNA		11	-1	89136766	262
ENSMUSG00000065431	miRNA	Mir186	ENSMUST00000083497	miRNA		3	1	157544279	71
ENSMUSG00000095691	snoRNA	Snord116l11	ENSMUST00000180312	snoRNA		7	-1	59902306	94
ENSMUSG00000077761	snoRNA	Gm25214	ENSMUST00000104573	snoRNA		2	-1	168882168	129
ENSMUSG00000080683	snoRNA	Gm23991	ENSMUST00000117033	snoRNA		7	1	44250450	93
ENSMUSG00000065583	miRNA	Mir218-2	ENSMUST00000083649	miRNA		11	1	35616816	110
ENSMUSG00000077400	snoRNA	Gm25417	ENSMUST00000104212	snoRNA		9	-1	92527708	131
ENSMUSG00000084642	snRNA	Gm24384	ENSMUST00000122693	snRNA		18	-1	63909156	75
ENSMUSG00000080419	miRNA	Gm26475	ENSMUST00000116769	miRNA		X	-1	128522809	121
ENSMUSG00000088200	snRNA	Gm23753	ENSMUST00000157575	snRNA		2	-1	126634687	149
ENSMUSG00000084604	snoRNA	Gm22205	ENSMUST00000122655	snoRNA		12	1	109688055	71
ENSMUSG00000089139	miRNA	Mir1964	ENSMUST00000158514	miRNA		7	1	29773294	83
ENSMUSG00000094363	miRNA	Gm26060	ENSMUST00000180094	miRNA		2	1	10486946	123
ENSMUSG00000077277	snRNA	Gm22783	ENSMUST00000104089	snRNA		X	1	19355001	107
ENSMUSG00000098710	miRNA	Mir7067	ENSMUST00000184412	miRNA		8	-1	70895570	63
ENSMUSG00000065477	miRNA	Mir411	ENSMUST00000083543	miRNA		12	1	109710175	82
ENSMUSG00000088519	snoRNA	Gm24439	ENSMUST00000157894	snoRNA		11	-1	3474401	117
ENSMUSG00000087759	misc_RNA	Gm23465	ENSMUST00000157134	misc_RNA		3	-1	100738713	262
ENSMUSG00000104856	snoRNA	Rnu3b3	ENSMUST00000198628	snoRNA		11	1	87448627	215
ENSMUSG00000098378	miRNA	Gm27864	ENSMUST00000183704	miRNA		8	1	74270247	190
ENSMUSG00000094438	snoRNA	Gm23618	ENSMUST00000179912	snoRNA		7	-1	59569042	79
ENSMUSG00000089441	rRNA	Gm22527	ENSMUST00000158816	rRNA		12	1	25687801	106
ENSMUSG00000077188	snoRNA	Gm25090	ENSMUST00000104000	snoRNA		2	1	159139361	132
ENSMUSG00000088022	misc_RNA	Gm49799	ENSMUST00000157397	misc_RNA		17	1	28446861	288
ENSMUSG00000064451	snoRNA	Snora23	ENSMUST00000082517	snoRNA		7	1	110046364	184
ENSMUSG00000096868	snoRNA	Gm22258	ENSMUST00000177645	snoRNA		7	-1	59799537	94
ENSMUSG00000096113	miRNA	Mir466b-5	ENSMUST00000103900	miRNA		2	1	10488887	88
ENSMUSG00000065074	snRNA	Gm24535	ENSMUST00000083140	snRNA		X	-1	21901838	107
ENSMUSG00000089147	snRNA	Gm25267	ENSMUST00000158522	snRNA		8	-1	82152782	63
ENSMUSG00000076190	miRNA	Gm23256	ENSMUST00000102235	miRNA		7	1	42958351	110
ENSMUSG00000088416	misc_RNA	Gm24239	ENSMUST00000157791	misc_RNA		8	-1	120717754	255
ENSMUSG00000088954	ribozyme	Gm24943	ENSMUST00000158329	ribozyme		4	1	51799920	433
ENSMUSG00000084487	snoRNA	Gm23787	ENSMUST00000122538	snoRNA		12	1	109684962	73
ENSMUSG00000094515	miRNA	Gm24567	ENSMUST00000179294	miRNA		4	1	15819909	121
ENSMUSG00000093572	miRNA	Gm24756	ENSMUST00000177002	miRNA		11	-1	59337146	96
ENSMUSG00000084739	snRNA	Gm22067	ENSMUST00000122790	snRNA		15	1	81592093	107
ENSMUSG00000065608	miRNA	Mirlet7c-2	ENSMUST00000083674	miRNA		15	1	85706603	95
ENSMUSG00000098357	miRNA	Mir7094-2	ENSMUST00000184622	miRNA		12	-1	114513694	60
ENSMUSG00000104858	miRNA	Mir136	ENSMUST00000199494	miRNA		12	1	109595327	62
ENSMUSG00000064853	snoRNA	Gm23442	ENSMUST00000082919	snoRNA		17	-1	35162696	134
ENSMUSG00000098991	rRNA	Gm27595	ENSMUST00000184579	rRNA		11	1	107851745	112
ENSMUSG00000093093	misc_RNA	Gm22642	ENSMUST00000175352	misc_RNA		3	1	89302478	252
ENSMUSG00000070103	miRNA	Mir488	ENSMUST00000093595	miRNA		1	1	158505625	109
ENSMUSG00000077207	snRNA	Gm25609	ENSMUST00000104019	snRNA		1	-1	137215647	104
ENSMUSG00000088895	snoRNA	Gm22519	ENSMUST00000158270	snoRNA		15	1	71794188	178
ENSMUSG00000089234	misc_RNA	Gm22207	ENSMUST00000158609	misc_RNA		8	1	12356153	317
ENSMUSG00000089008	snRNA	Gm23859	ENSMUST00000158383	snRNA		18	1	90228899	64
ENSMUSG00000106439	miRNA	Gm44327	ENSMUST00000200068	miRNA		3	-1	136798378	117
ENSMUSG00000099165	miRNA	Mir6940	ENSMUST00000183447	miRNA		12	1	112733322	70
ENSMUSG00000095986	miRNA	Gm23053	ENSMUST00000175136	miRNA		6	-1	35524638	96
ENSMUSG00000088903	scaRNA	Gm25434	ENSMUST00000158278	scaRNA		6	-1	139196231	167
ENSMUSG00000088517	snRNA	Gm24437	ENSMUST00000157892	snRNA		16	1	36321481	104
ENSMUSG00000065514	miRNA	Mir106b	ENSMUST00000083580	miRNA		5	-1	138165818	82
ENSMUSG00000098827	miRNA	Gm27399	ENSMUST00000184250	miRNA		11	1	98238618	78
ENSMUSG00000089608	snRNA	Gm22503	ENSMUST00000158983	snRNA		10	1	44732353	115
ENSMUSG00000095233	snRNA	Gm26378	ENSMUST00000179093	snRNA		18	1	32820693	107
ENSMUSG00000105109	miRNA	Gm44297	ENSMUST00000198304	miRNA		13	-1	23534254	141
ENSMUSG00000098253	miRNA	Mir7219	ENSMUST00000184508	miRNA		18	-1	68260973	54
ENSMUSG00000098928	miRNA	Mir6988	ENSMUST00000184338	miRNA		19	1	6051334	59
ENSMUSG00000104783	miRNA	Gm44381	ENSMUST00000199670	miRNA		11	1	24014655	105
ENSMUSG00000092935	miRNA	Gm22697	ENSMUST00000175194	miRNA		18	1	42301890	63
ENSMUSG00000084469	snRNA	Gm22956	ENSMUST00000122520	snRNA		5	1	138219737	80
ENSMUSG00000096523	rRNA	Gm25729	ENSMUST00000179050	rRNA		Y	-1	83675449	108
ENSMUSG00000087718	snRNA	Gm22236	ENSMUST00000157093	snRNA		10	-1	110904900	106
ENSMUSG00000092956	miRNA	Gm26220	ENSMUST00000175215	miRNA		6	1	29396617	89
ENSMUSG00000077565	snoRNA	Gm23201	ENSMUST00000104377	snoRNA		2	1	167064998	89
ENSMUSG00000089580	snoRNA	Gm23340	ENSMUST00000158955	snoRNA		13	-1	24316852	123
ENSMUSG00000064769	snRNA	Gm23518	ENSMUST00000082835	snRNA		16	-1	35388085	153
ENSMUSG00000093223	miRNA	Gm27903	ENSMUST00000175482	miRNA		15	-1	79594793	126
ENSMUSG00000089206	snRNA	Gm26214	ENSMUST00000158581	snRNA		1	1	105945554	107
ENSMUSG00000077416	snoRNA	Gm23747	ENSMUST00000104228	snoRNA		15	1	75759859	131
ENSMUSG00000087870	snoRNA	Gm26100	ENSMUST00000157245	snoRNA		8	1	128771170	127
ENSMUSG00000077780	snoRNA	Gm24161	ENSMUST00000104592	snoRNA		4	-1	126818145	130
ENSMUSG00000094621	miRNA	CAAA01098150.1	ENSMUST00000178366	miRNA		GL456372.1	-1	13382	121
ENSMUSG00000089091	snRNA	Gm25656	ENSMUST00000158466	snRNA		6	-1	103832578	66
ENSMUSG00000092748	miRNA	Gm22175	ENSMUST00000175007	miRNA		12	-1	113425227	78
ENSMUSG00000089026	snRNA	Gm25014	ENSMUST00000158401	snRNA		8	-1	13283217	103
ENSMUSG00000094952	miRNA	Mir3070b	ENSMUST00000175205	miRNA		12	1	109588592	89
ENSMUSG00000089538	snoRNA	Gm25161	ENSMUST00000158913	snoRNA		6	-1	46481840	132
ENSMUSG00000077704	snoRNA	Snord89	ENSMUST00000104516	snoRNA		1	-1	39548854	110
ENSMUSG00000064508	rRNA	n-R5s96	ENSMUST00000082574	rRNA		8	1	47719246	124
ENSMUSG00000077261	snoRNA	Gm24431	ENSMUST00000104073	snoRNA		13	-1	106990467	66
ENSMUSG00000092747	miRNA	Gm22180	ENSMUST00000175006	miRNA		4	-1	136609864	59
ENSMUSG00000077382	rRNA	n-R5s200	ENSMUST00000104194	rRNA		2	-1	84700860	113
ENSMUSG00000077938	miRNA	Gm24132	ENSMUST00000104745	miRNA		8	1	96656129	91
ENSMUSG00000065803	snRNA	Gm23040	ENSMUST00000083869	snRNA		7	1	98506954	163
ENSMUSG00000088180	snRNA	Gm22218	ENSMUST00000157555	snRNA		14	-1	56852888	59
ENSMUSG00000088752	miRNA	Mir1934	ENSMUST00000158127	miRNA		11	1	69663043	83
ENSMUSG00000065132	snRNA	Gm24456	ENSMUST00000083198	snRNA		3	-1	123743403	107
ENSMUSG00000084652	snRNA	Gm22717	ENSMUST00000122703	snRNA		9	1	90315910	171
ENSMUSG00000094581	snoRNA	Gm26365	ENSMUST00000179177	snoRNA		7	-1	59693313	94
ENSMUSG00000094750	miRNA	Gm25019	ENSMUST00000179732	miRNA		6	1	133196640	110
ENSMUSG00000075893	snRNA	Gm25538	ENSMUST00000101943	snRNA		12	1	12700039	107
ENSMUSG00000089163	snRNA	CAAA01019125.1	ENSMUST00000158538	snRNA		GL456233.1	-1	79797	101
ENSMUSG00000098696	misc_RNA	Gm27617	ENSMUST00000184321	misc_RNA		14	1	35569953	168
ENSMUSG00000087804	snRNA	Gm23434	ENSMUST00000157179	snRNA		1	1	99017364	100
ENSMUSG00000094408	snRNA	Gm24072	ENSMUST00000178506	snRNA		6	1	130320874	74
ENSMUSG00000087862	snoRNA	Gm23048	ENSMUST00000157237	snoRNA		9	1	19437687	129
ENSMUSG00000096245	miRNA	Gm24269	ENSMUST00000179216	miRNA		9	1	110925403	77
ENSMUSG00000080518	snoRNA	Gm22193	ENSMUST00000116868	snoRNA		8	-1	110842458	76
ENSMUSG00000099108	misc_RNA	Gm27979	ENSMUST00000185126	misc_RNA		X	1	68676848	56
ENSMUSG00000098791	misc_RNA	Gm27402	ENSMUST00000183890	misc_RNA		6	1	17907172	120
ENSMUSG00000077609	snoRNA	Gm25795	ENSMUST00000104421	snoRNA		X	-1	157299621	132
ENSMUSG00000084576	snRNA	Gm23655	ENSMUST00000122627	snRNA		16	-1	89451599	105
ENSMUSG00000065564	miRNA	Mirlet7b	ENSMUST00000083630	miRNA		15	1	85707319	85
ENSMUSG00000088984	snoRNA	Gm25604	ENSMUST00000158359	snoRNA		4	-1	126861112	133
ENSMUSG00000088719	snRNA	Gm22733	ENSMUST00000158094	snRNA		11	-1	74936151	91
ENSMUSG00000088711	rRNA	Gm22731	ENSMUST00000158086	rRNA		2	1	145352843	94
ENSMUSG00000064763	snRNA	Gm23515	ENSMUST00000082829	snRNA		8	-1	65667701	107
ENSMUSG00000098887	miRNA	Mir6413	ENSMUST00000184049	miRNA		10	-1	20297688	108
ENSMUSG00000088976	misc_RNA	Gm23759	ENSMUST00000158351	misc_RNA		9	1	90031307	268
ENSMUSG00000065567	miRNA	Mir30c-2	ENSMUST00000083633	miRNA		1	1	23291701	84
ENSMUSG00000099129	miRNA	Mir7076	ENSMUST00000183519	miRNA		8	-1	111689674	74
ENSMUSG00000076009	miRNA	Mir688	ENSMUST00000102055	miRNA		15	-1	102671866	75
ENSMUSG00000089543	snoRNA	Gm25836	ENSMUST00000158918	snoRNA		4	-1	79244709	123
ENSMUSG00000064949	snoRNA	Snora61	ENSMUST00000083015	snoRNA		4	1	132310240	130
ENSMUSG00000088384	rRNA	Gm24690	ENSMUST00000157759	rRNA		18	1	38356578	97
ENSMUSG00000095529	miRNA	Gm23612	ENSMUST00000103823	miRNA		16	1	19319686	110
ENSMUSG00000088832	snRNA	Gm23543	ENSMUST00000158207	snRNA		6	-1	65864276	106
ENSMUSG00000094842	miRNA	Gm22639	ENSMUST00000175591	miRNA		4	1	44865307	125
ENSMUSG00000098280	miRNA	Mir7687	ENSMUST00000184722	miRNA		8	1	120538696	59
ENSMUSG00000084513	rRNA	n-R5s179	ENSMUST00000122564	rRNA		5	-1	148753440	118
ENSMUSG00000088751	snoRNA	Gm24902	ENSMUST00000158126	snoRNA		5	1	57110824	123
ENSMUSG00000106556	miRNA	Gm44375	ENSMUST00000196657	miRNA		13	-1	69401397	150
ENSMUSG00000099053	rRNA	Gm27792	ENSMUST00000184031	rRNA		13	1	96897276	115
ENSMUSG00000106436	miRNA	Mir7015	ENSMUST00000199525	miRNA		4	-1	120973322	64
ENSMUSG00000077230	snRNA	Gm25097	ENSMUST00000104042	snRNA		X	1	145160477	145
ENSMUSG00000094476	snoRNA	Gm25934	ENSMUST00000178642	snoRNA		7	-1	59351487	79
ENSMUSG00000096731	snRNA	Gm24316	ENSMUST00000083041	snRNA		14	1	50731053	107
ENSMUSG00000094214	snRNA	Gm23448	ENSMUST00000083151	snRNA		1	-1	63300383	104
ENSMUSG00000104657	miRNA	Gm47297	ENSMUST00000197891	miRNA		11	1	120274487	138
ENSMUSG00000094097	rRNA	n-R5s111	ENSMUST00000178203	rRNA		8	-1	123557608	119
ENSMUSG00000065004	snoRNA	Gm26326	ENSMUST00000083070	snoRNA		12	1	43743037	129
ENSMUSG00000093024	miRNA	Gm25299	ENSMUST00000175283	miRNA		X	1	23982185	102
ENSMUSG00000093281	miRNA	Gm22565	ENSMUST00000175540	miRNA		8	1	5705427	69
ENSMUSG00000077668	snRNA	Gm26143	ENSMUST00000104480	snRNA		7	1	142424795	108
ENSMUSG00000095112	snRNA	Gm23712	ENSMUST00000179713	snRNA		5	-1	72418819	107
ENSMUSG00000080478	snoRNA	Snord23	ENSMUST00000116828	snoRNA		7	-1	15938870	109
ENSMUSG00000093912	miRNA	Mir3470b	ENSMUST00000175563	miRNA		16	1	44013852	126
ENSMUSG00000106152	miRNA	Gm44413	ENSMUST00000198921	miRNA		6	-1	56173031	104
ENSMUSG00000098813	snoRNA	Gm27326	ENSMUST00000183504	snoRNA		11	-1	97780276	95
ENSMUSG00000064526	snRNA	Gm26439	ENSMUST00000082592	snRNA		11	-1	86437415	106
ENSMUSG00000098300	miRNA	Mir6540	ENSMUST00000184886	miRNA		16	-1	42303469	108
ENSMUSG00000096838	snRNA	Gm26232	ENSMUST00000083360	snRNA		3	1	96450446	166
ENSMUSG00000088646	rRNA	Gm26486	ENSMUST00000158021	rRNA		5	1	53418573	110
ENSMUSG00000064915	snRNA	Gm22575	ENSMUST00000082981	snRNA		3	1	124410655	110
ENSMUSG00000098655	miRNA	Mir7011	ENSMUST00000183768	miRNA		3	-1	88440951	73
ENSMUSG00000098669	misc_RNA	Gm27580	ENSMUST00000183666	misc_RNA		4	1	89445219	149
ENSMUSG00000077394	snoRNA	Gm24339	ENSMUST00000104206	snoRNA		9	-1	15326539	76
ENSMUSG00000089599	rRNA	Gm26157	ENSMUST00000158974	rRNA		11	1	68053335	126
ENSMUSG00000064394	snRNA	Gm23622	ENSMUST00000082460	snRNA		14	-1	75651529	107
ENSMUSG00000065750	snoRNA	Gm23346	ENSMUST00000083816	snoRNA		6	1	70855444	136
ENSMUSG00000096339	snRNA	Gm24713	ENSMUST00000178850	snRNA		15	-1	18009369	107
ENSMUSG00000093184	miRNA	Gm25693	ENSMUST00000175443	miRNA		11	-1	38037263	85
ENSMUSG00000099006	miRNA	Mir6974	ENSMUST00000184381	miRNA		17	-1	35204557	83
ENSMUSG00000095705	rRNA	Gm24828	ENSMUST00000178507	rRNA		Y	-1	85414125	108
ENSMUSG00000098667	misc_RNA	Gm27585	ENSMUST00000183717	misc_RNA		8	1	7521636	199
ENSMUSG00000098261	snRNA	Gm27521	ENSMUST00000184022	snRNA		4	1	96917020	64
ENSMUSG00000095713	snoRNA	Gm26466	ENSMUST00000179615	snoRNA		7	-1	59407275	79
ENSMUSG00000096462	snoRNA	Gm22812	ENSMUST00000178329	snoRNA		7	-1	59807088	94
ENSMUSG00000077515	snoRNA	Gm25878	ENSMUST00000104327	snoRNA		2	1	167063473	93
ENSMUSG00000095479	snoRNA	Gm25074	ENSMUST00000178782	snoRNA		7	-1	59776817	94
ENSMUSG00000096504	miRNA	Mir465b-2	ENSMUST00000104662	miRNA		X	-1	66835842	79
ENSMUSG00000094551	snRNA	Gm22392	ENSMUST00000177971	snRNA		15	1	44432595	107
ENSMUSG00000064468	snRNA	Gm25081	ENSMUST00000082534	snRNA		2	1	38480338	108
ENSMUSG00000076961	miRNA	Gm23251	ENSMUST00000103773	miRNA		7	-1	75757368	110
ENSMUSG00000077685	snoRNA	Gm22498	ENSMUST00000104497	snoRNA		14	-1	56837156	86
ENSMUSG00000099248	misc_RNA	Gm27543	ENSMUST00000183562	misc_RNA		6	1	52249299	177
ENSMUSG00000065130	snRNA	Gm24457	ENSMUST00000083196	snRNA		3	-1	142773076	105
ENSMUSG00000088363	snRNA	Gm23497	ENSMUST00000157738	snRNA		1	1	118681821	130
ENSMUSG00000088861	rRNA	Gm23065	ENSMUST00000158236	rRNA		11	1	11140514	130
ENSMUSG00000065122	snRNA	Gm26126	ENSMUST00000083188	snRNA		9	1	84649496	164
ENSMUSG00000093499	miRNA	Gm25442	ENSMUST00000177270	miRNA		3	1	35325614	92
ENSMUSG00000089555	miRNA	Mir1933	ENSMUST00000158930	miRNA		11	-1	21344675	88
ENSMUSG00000088955	snoRNA	Gm24944	ENSMUST00000158330	snoRNA		9	1	107987369	128
ENSMUSG00000077318	snoRNA	Gm24173	ENSMUST00000104130	snoRNA		1	-1	11134238	128
ENSMUSG00000094013	snRNA	Gm25829	ENSMUST00000178275	snRNA		1	-1	54249208	107
ENSMUSG00000064960	snoRNA	Gm24406	ENSMUST00000083026	snoRNA		3	-1	144586952	128
ENSMUSG00000098502	misc_RNA	Gm27511	ENSMUST00000183502	misc_RNA		11	1	60099547	127
ENSMUSG00000089039	snRNA	Gm22165	ENSMUST00000158414	snRNA		3	1	64109635	103
ENSMUSG00000088848	snoRNA	Gm26352	ENSMUST00000158223	snoRNA		1	1	43902928	125
ENSMUSG00000094815	snoRNA	Gm22615	ENSMUST00000158102	snoRNA		13	-1	62543503	70
ENSMUSG00000064565	snRNA	Gm24145	ENSMUST00000082631	snRNA		16	-1	11167267	163
ENSMUSG00000080465	snoRNA	Gm22486	ENSMUST00000116815	snoRNA		6	-1	71882693	137
ENSMUSG00000098510	miRNA	Mir6968	ENSMUST00000184739	miRNA		17	1	26935472	68
ENSMUSG00000084477	misc_RNA	Gm25780	ENSMUST00000122528	misc_RNA		6	1	140530963	253
ENSMUSG00000094330	miRNA	Gm22051	ENSMUST00000117002	miRNA		2	1	10506555	127
ENSMUSG00000088571	misc_RNA	Gm25455	ENSMUST00000157946	misc_RNA		2	1	24601365	325
ENSMUSG00000088333	snRNA	Gm27396	ENSMUST00000157708	snRNA		1	-1	3783933	58
ENSMUSG00000089613	snRNA	Gm23504	ENSMUST00000158988	snRNA		1	-1	87415349	95
ENSMUSG00000065768	snRNA	Gm23845	ENSMUST00000083834	snRNA		4	1	129895573	152
ENSMUSG00000084549	snoRNA	DQ267100	ENSMUST00000122600	snoRNA		12	1	109649617	72
ENSMUSG00000088581	misc_RNA	Gm22967	ENSMUST00000157956	misc_RNA		17	-1	69594777	239
ENSMUSG00000064970	snRNA	Gm23690	ENSMUST00000083036	snRNA		1	-1	181813700	94
ENSMUSG00000088443	snoRNA	Gm23554	ENSMUST00000157818	snoRNA		6	1	124142185	110
ENSMUSG00000087708	snRNA	Gm23000	ENSMUST00000157083	snRNA		X	1	66728415	139
ENSMUSG00000093274	miRNA	Gm26235	ENSMUST00000175533	miRNA		18	1	18099560	101
ENSMUSG00000087935	snoRNA	Snora81	ENSMUST00000157310	snoRNA		16	1	23110756	178
ENSMUSG00000095555	miRNA	Gm28010	ENSMUST00000179485	miRNA		9	-1	72511334	126
ENSMUSG00000088829	snoRNA	Gm25227	ENSMUST00000158204	snoRNA		1	-1	15686046	112
ENSMUSG00000077209	snoRNA	Gm25608	ENSMUST00000104021	snoRNA		5	-1	64002484	132
ENSMUSG00000065464	miRNA	Mir185	ENSMUST00000083530	miRNA		16	-1	18327465	65
ENSMUSG00000084472	rRNA	n-R5s23	ENSMUST00000122523	rRNA		18	-1	24686282	115
ENSMUSG00000065399	miRNA	Mir133a-1	ENSMUST00000083465	miRNA		18	-1	10782976	68
ENSMUSG00000094173	miRNA	Mir344h-1	ENSMUST00000174922	miRNA		7	-1	61739409	60
ENSMUSG00000094048	snoRNA	Gm26284	ENSMUST00000180107	snoRNA		7	-1	59589626	79
ENSMUSG00000094031	snoRNA	Gm24656	ENSMUST00000177548	snoRNA		15	1	23154734	132
ENSMUSG00000088889	snRNA	Gm24211	ENSMUST00000158264	snRNA		11	1	74728403	107
ENSMUSG00000077408	snoRNA	Gm25415	ENSMUST00000104220	snoRNA		14	1	89706805	132
ENSMUSG00000099154	miRNA	Gm27306	ENSMUST00000183970	miRNA		2	1	3075107	107
ENSMUSG00000080358	snRNA	Gm26249	ENSMUST00000116708	snRNA		9	1	44897865	118
ENSMUSG00000088446	miRNA	Gm23556	ENSMUST00000157821	miRNA		X	-1	78908640	92
ENSMUSG00000088019	snoRNA	Gm23826	ENSMUST00000157394	snoRNA		12	-1	66561372	119
ENSMUSG00000084674	misc_RNA	Gm26027	ENSMUST00000122725	misc_RNA		3	1	121337692	268
ENSMUSG00000076454	miRNA	Mir762	ENSMUST00000103255	miRNA		7	1	127708487	76
ENSMUSG00000105458	miRNA	Mir3074-2	ENSMUST00000199621	miRNA		8	-1	84208907	83
ENSMUSG00000092675	miRNA	Gm25262	ENSMUST00000174934	miRNA		4	1	43631425	133
ENSMUSG00000094837	snoRNA	Gm25471	ENSMUST00000180126	snoRNA		7	-1	59761647	94
ENSMUSG00000088056	snoRNA	Gm24262	ENSMUST00000157431	snoRNA		9	1	35144636	144
ENSMUSG00000095513	snRNA	Gm24136	ENSMUST00000083374	snRNA		3	1	96422733	165
ENSMUSG00000088073	ribozyme	Gm22817	ENSMUST00000157448	ribozyme		4	1	21270075	356
ENSMUSG00000064745	snRNA	Gm24708	ENSMUST00000082811	snRNA		7	-1	16624677	103
ENSMUSG00000093081	miRNA	Mir3075	ENSMUST00000175340	miRNA		14	1	25534439	85
ENSMUSG00000092770	miRNA	Mirlet7a-2	ENSMUST00000175029	miRNA		9	1	41536716	96
ENSMUSG00000064494	snRNA	Gm22063	ENSMUST00000082560	snRNA		8	1	105172496	107
ENSMUSG00000089199	snRNA	Gm25772	ENSMUST00000158574	snRNA		4	1	137325559	56
ENSMUSG00000092743	snRNA	Gm22177	ENSMUST00000175002	snRNA		7	1	84170565	158
ENSMUSG00000093306	miRNA	Gm23802	ENSMUST00000175565	miRNA		2	-1	152772889	102
ENSMUSG00000099063	miRNA	Mir7031	ENSMUST00000183860	miRNA		5	-1	121819273	65
ENSMUSG00000088737	rRNA	Gm23899	ENSMUST00000158112	rRNA		14	-1	66591695	90
ENSMUSG00000099107	misc_RNA	Gm27898	ENSMUST00000183987	misc_RNA		11	-1	96199830	80
ENSMUSG00000064664	snRNA	Gm24459	ENSMUST00000082730	snRNA		8	1	124357238	86
ENSMUSG00000077514	snoRNA	Gm25877	ENSMUST00000104326	snoRNA		4	-1	103586400	129
ENSMUSG00000084693	snoRNA	Gm24894	ENSMUST00000122744	snoRNA		18	-1	10551406	118
ENSMUSG00000092697	miRNA	Gm22925	ENSMUST00000174956	miRNA		2	1	10510791	102
ENSMUSG00000077467	snoRNA	Gm26421	ENSMUST00000104279	snoRNA		2	1	111825179	132
ENSMUSG00000084607	snRNA	Gm22208	ENSMUST00000122658	snRNA		15	1	34531714	110
ENSMUSG00000065361	misc_RNA	1600017P15Rik	ENSMUST00000083427	misc_RNA		3	-1	30595757	412
ENSMUSG00000094659	miRNA	Mir466c-2	ENSMUST00000180211	miRNA		2	1	10483966	90
ENSMUSG00000070175	snRNA	Gm24162	ENSMUST00000093665	snRNA		1	-1	20444912	102
ENSMUSG00000088851	snoRNA	Gm24728	ENSMUST00000158226	snoRNA		3	1	143674943	125
ENSMUSG00000094946	miRNA	Gm25754	ENSMUST00000178653	miRNA		1	1	83795912	121
ENSMUSG00000098780	miRNA	Mir6390	ENSMUST00000184405	miRNA		14	-1	105623770	129
ENSMUSG00000084514	miRNA	Mir1893	ENSMUST00000122565	miRNA		18	-1	6490646	83
ENSMUSG00000084428	snRNA	Gm25102	ENSMUST00000122479	snRNA		17	1	57747565	112
ENSMUSG00000087963	snoRNA	Gm25394	ENSMUST00000157338	snoRNA		13	1	49684301	133
ENSMUSG00000065260	snRNA	Gm23453	ENSMUST00000083326	snRNA		1	1	33422733	106
ENSMUSG00000098990	misc_RNA	Gm27596	ENSMUST00000185061	misc_RNA		12	1	109541168	83
ENSMUSG00000096211	snRNA	Gm23330	ENSMUST00000082660	snRNA		3	1	19560253	164
ENSMUSG00000095418	snoRNA	Gm23922	ENSMUST00000178792	snoRNA		7	-1	59370184	79
ENSMUSG00000094435	miRNA	Gm23617	ENSMUST00000175410	miRNA		5	-1	67631919	95
ENSMUSG00000089107	snRNA	Gm23117	ENSMUST00000158482	snRNA		13	1	43872802	108
ENSMUSG00000064722	snoRNA	Gm25857	ENSMUST00000082788	snoRNA		2	-1	119740956	129
ENSMUSG00000089264	snoRNA	Gm22889	ENSMUST00000158639	snoRNA		2	1	127677670	58
ENSMUSG00000088194	rRNA	Gm23900	ENSMUST00000157569	rRNA		2	-1	81543342	108
ENSMUSG00000094875	snRNA	Gm23151	ENSMUST00000178061	snRNA		5	-1	126389654	107
ENSMUSG00000065221	snRNA	Gm25793	ENSMUST00000083287	snRNA		X	-1	153576594	107
ENSMUSG00000077119	miRNA	Mir741	ENSMUST00000103931	miRNA		X	-1	66796875	71
ENSMUSG00000098441	miRNA	Mir6537	ENSMUST00000184150	miRNA		7	-1	25097175	110
ENSMUSG00000104921	snoRNA	Gm23927	ENSMUST00000199928	snoRNA		19	-1	4078512	216
ENSMUSG00000065006	snRNA	Gm26325	ENSMUST00000083072	snRNA		7	1	12930774	107
ENSMUSG00000094003	rRNA	n-R5s128	ENSMUST00000180096	rRNA		8	-1	123586360	119
ENSMUSG00000093217	miRNA	Gm25246	ENSMUST00000175476	miRNA		X	1	13653381	69
ENSMUSG00000077604	snoRNA	Snord1b	ENSMUST00000104416	snoRNA		11	1	116674148	75
ENSMUSG00000064793	snRNA	Gm24356	ENSMUST00000082859	snRNA		7	1	28123254	106
ENSMUSG00000065266	snoRNA	Gm23454	ENSMUST00000083332	snoRNA		X	1	93251474	133
ENSMUSG00000104771	miRNA	Gm44394	ENSMUST00000199558	miRNA		13	1	23570726	138
ENSMUSG00000065822	snoRNA	Snord15a	ENSMUST00000083888	snoRNA		7	-1	99482932	148
ENSMUSG00000096431	snoRNA	Gm22131	ENSMUST00000178415	snoRNA		7	-1	59681148	94
ENSMUSG00000077586	snoRNA	Gm24377	ENSMUST00000104398	snoRNA		12	-1	59665784	131
ENSMUSG00000088191	snoRNA	Gm23903	ENSMUST00000157566	snoRNA		15	-1	27061866	131
ENSMUSG00000070140	miRNA	Mir483	ENSMUST00000093631	miRNA		7	-1	142654996	73
ENSMUSG00000076376	miRNA	Mir674	ENSMUST00000102421	miRNA		2	1	117185127	100
ENSMUSG00000098786	miRNA	Mir6995	ENSMUST00000183658	miRNA		19	-1	47273589	71
ENSMUSG00000098994	misc_RNA	Gm27599	ENSMUST00000183758	misc_RNA		17	1	29059744	174
ENSMUSG00000095151	miRNA	Gm24028	ENSMUST00000178991	miRNA		2	1	10496791	124
ENSMUSG00000064524	snRNA	Gm26441	ENSMUST00000082590	snRNA		X	-1	151262021	104
ENSMUSG00000088504	snoRNA	Gm26490	ENSMUST00000157879	snoRNA		4	-1	89183120	140
ENSMUSG00000065940	snoRNA	Gm23795	ENSMUST00000084006	snoRNA		7	-1	68952236	137
ENSMUSG00000088241	snoRNA	Gm22916	ENSMUST00000157616	snoRNA		6	1	124095450	119
ENSMUSG00000094563	miRNA	Gm25228	ENSMUST00000180121	miRNA		14	-1	42614346	121
ENSMUSG00000088883	snoRNA	Gm24212	ENSMUST00000158258	snoRNA		8	-1	89667304	132
ENSMUSG00000096561	snRNA	Gm24097	ENSMUST00000178720	snRNA		5	1	104936651	107
ENSMUSG00000106272	scaRNA	Gm22897	ENSMUST00000197782	scaRNA		5	-1	4985237	127
ENSMUSG00000092856	miRNA	Gm25956	ENSMUST00000175115	miRNA		7	-1	54213385	217
ENSMUSG00000084474	snRNA	Gm25783	ENSMUST00000122525	snRNA		17	1	43698363	190
ENSMUSG00000065254	misc_RNA	Gm23973	ENSMUST00000083320	misc_RNA		7	1	103271550	321
ENSMUSG00000098533	miRNA	Mir6373	ENSMUST00000183546	miRNA		6	1	102794384	102
ENSMUSG00000093073	miRNA	Mir124a-2	ENSMUST00000175332	miRNA		3	1	17795662	109
ENSMUSG00000065380	snRNA	Gm23095	ENSMUST00000083446	snRNA		19	1	33954235	107
ENSMUSG00000065692	snoRNA	Gm25410	ENSMUST00000083758	snoRNA		10	-1	8824147	137
ENSMUSG00000088172	snRNA	Gm25217	ENSMUST00000157547	snRNA		7	1	119969821	101
ENSMUSG00000064779	snRNA	Gm22997	ENSMUST00000082845	snRNA		2	1	110218003	107
ENSMUSG00000075934	snRNA	Gm24423	ENSMUST00000101982	snRNA		8	-1	21548165	106
ENSMUSG00000088322	snRNA	Gm25664	ENSMUST00000157697	snRNA		10	1	52905638	107
ENSMUSG00000077354	snoRNA	Gm26286	ENSMUST00000104166	snoRNA		5	1	100831281	134
ENSMUSG00000088264	snRNA	Gm24783	ENSMUST00000157639	snRNA		X	1	121914560	100
ENSMUSG00000106642	miRNA	Mir465d	ENSMUST00000196314	miRNA		X	-1	66822713	58
ENSMUSG00000098986	misc_RNA	Gm28006	ENSMUST00000183841	misc_RNA		19	-1	5845037	122
ENSMUSG00000065320	snRNA	Gm22056	ENSMUST00000083386	snRNA		5	-1	113928804	81
ENSMUSG00000096098	miRNA	Mir713	ENSMUST00000178651	miRNA		13	1	62760739	108
ENSMUSG00000077184	snoRNA	Gm25092	ENSMUST00000103996	snoRNA		17	-1	24023328	129
ENSMUSG00000077928	miRNA	Mir208b	ENSMUST00000104735	miRNA		14	-1	54975776	77
ENSMUSG00000099181	miRNA	Mir6905	ENSMUST00000184228	miRNA		10	1	24910664	70
ENSMUSG00000098704	miRNA	Mir6934	ENSMUST00000183965	miRNA		11	-1	119154137	62
ENSMUSG00000088691	snoRNA	Gm22331	ENSMUST00000158066	snoRNA		1	1	112467911	136
ENSMUSG00000093403	miRNA	Mir5616	ENSMUST00000177217	miRNA		4	1	149537863	60
ENSMUSG00000080555	miRNA	Gm24396	ENSMUST00000116905	miRNA		X	1	61145362	93
ENSMUSG00000092999	misc_RNA	Gm23921	ENSMUST00000175258	misc_RNA		7	1	25868945	107
ENSMUSG00000065436	miRNA	Mir342	ENSMUST00000083502	miRNA		12	1	108658620	99
ENSMUSG00000092922	miRNA	Mir5101	ENSMUST00000175181	miRNA		12	1	75909103	83
ENSMUSG00000088545	snRNA	Gm25982	ENSMUST00000157920	snRNA		4	-1	156023158	101
ENSMUSG00000077830	miRNA	Gm26050	ENSMUST00000104640	miRNA		12	1	3699178	63
ENSMUSG00000092923	miRNA	Gm24561	ENSMUST00000175182	miRNA		2	-1	168178252	95
ENSMUSG00000093155	miRNA	Gm25035	ENSMUST00000175414	miRNA		1	-1	74586972	77
ENSMUSG00000088964	snRNA	Gm22087	ENSMUST00000158339	snRNA		10	-1	44597327	88
ENSMUSG00000064844	snoRNA	Gm26202	ENSMUST00000082910	snoRNA		18	1	75001880	65
ENSMUSG00000088010	rRNA	Gm23740	ENSMUST00000157385	rRNA		11	-1	23063232	100
ENSMUSG00000065935	snRNA	Gm25629	ENSMUST00000084001	snRNA		X	-1	74997683	107
ENSMUSG00000098968	miRNA	Gm27843	ENSMUST00000184273	miRNA		X	-1	102013152	104
ENSMUSG00000088046	snoRNA	Gm23324	ENSMUST00000157421	snoRNA		14	-1	94448351	131
ENSMUSG00000098948	misc_RNA	Gm27640	ENSMUST00000184580	misc_RNA		11	-1	3647325	147
ENSMUSG00000084708	snoRNA	Gm22988	ENSMUST00000122759	snoRNA		11	-1	69669778	144
ENSMUSG00000088476	snoRNA	Gm23083	ENSMUST00000157851	snoRNA		16	1	80137352	116
ENSMUSG00000072837	miRNA	Mir546	ENSMUST00000102105	miRNA		10	1	126998440	121
ENSMUSG00000088154	snRNA	Gm25637	ENSMUST00000157529	snRNA		4	1	41050220	107
ENSMUSG00000089432	miRNA	Mir1966	ENSMUST00000158807	miRNA		8	1	105615466	108
ENSMUSG00000065416	miRNA	Mir19a	ENSMUST00000083482	miRNA		14	1	115044000	82
ENSMUSG00000077521	snoRNA	Gm25378	ENSMUST00000104333	snoRNA		4	1	28365316	129
ENSMUSG00000104762	miRNA	Gm44308	ENSMUST00000197080	miRNA		10	-1	61125235	99
ENSMUSG00000105513	miRNA	Gm44409	ENSMUST00000198810	miRNA		18	-1	10366073	166
ENSMUSG00000099103	misc_RNA	Gm27901	ENSMUST00000184559	misc_RNA		7	1	143447605	61
ENSMUSG00000099199	miRNA	Mir7012	ENSMUST00000183900	miRNA		3	1	90270149	64
ENSMUSG00000088746	snoRNA	Gm23225	ENSMUST00000158121	snoRNA		14	-1	91108292	114
ENSMUSG00000064435	snoRNA	Gm25588	ENSMUST00000082501	snoRNA		1	1	153440079	140
ENSMUSG00000084593	snRNA	Gm22345	ENSMUST00000122644	snRNA		4	-1	108537597	107
ENSMUSG00000094847	snoRNA	Gm22640	ENSMUST00000179035	snoRNA		7	-1	59578397	79
ENSMUSG00000084581	snRNA	Gm25179	ENSMUST00000122632	snRNA		16	-1	35234923	128
ENSMUSG00000088772	snoRNA	Gm26040	ENSMUST00000158147	snoRNA		3	1	27868113	161
ENSMUSG00000104804	miRNA	Mir7233	ENSMUST00000198609	miRNA		6	-1	127788143	60
ENSMUSG00000065449	miRNA	Mir365-1	ENSMUST00000083515	miRNA		16	1	13453840	87
ENSMUSG00000089231	snoRNA	Gm23112	ENSMUST00000158606	snoRNA		3	-1	14267439	125
ENSMUSG00000065458	miRNA	Mir181b-1	ENSMUST00000083524	miRNA		1	1	137966639	80
ENSMUSG00000077113	miRNA	Mir466p	ENSMUST00000103925	miRNA		2	1	10506006	89
ENSMUSG00000096037	rRNA	n-R5s136	ENSMUST00000179080	rRNA		8	-1	123599979	119
ENSMUSG00000065590	miRNA	Mir212	ENSMUST00000083656	miRNA		11	1	75173388	91
ENSMUSG00000087980	snRNA	Gm22226	ENSMUST00000157355	snRNA		7	-1	96920102	109
ENSMUSG00000088809	miRNA	Gm24078	ENSMUST00000158184	miRNA		4	1	22747131	103
ENSMUSG00000080495	miRNA	Gm26303	ENSMUST00000116845	miRNA		9	1	115381960	119
ENSMUSG00000089337	snoRNA	Gm24346	ENSMUST00000158712	snoRNA		5	1	65777014	194
ENSMUSG00000096360	miRNA	Mir466b-7	ENSMUST00000103804	miRNA		2	1	10496268	88
ENSMUSG00000105670	miRNA	Gm44464	ENSMUST00000198010	miRNA		3	-1	27026555	138
ENSMUSG00000064579	snRNA	Gm25796	ENSMUST00000082645	snRNA		3	1	45817736	163
ENSMUSG00000088111	snoRNA	Gm24064	ENSMUST00000157486	snoRNA		1	1	26566833	106
ENSMUSG00000087721	rRNA	Gm26280	ENSMUST00000157096	rRNA		1	-1	135150766	101
ENSMUSG00000093757	miRNA	Mir5623	ENSMUST00000176631	miRNA		19	1	58051167	70
ENSMUSG00000095945	snoRNA	Gm25194	ENSMUST00000177987	snoRNA		7	-1	59576527	79
ENSMUSG00000084706	misc_RNA	Gm22987	ENSMUST00000122757	misc_RNA		9	1	121242342	246
ENSMUSG00000096091	snRNA	Gm26335	ENSMUST00000178449	snRNA		5	1	32175099	107
ENSMUSG00000088106	snRNA	Gm22378	ENSMUST00000157481	snRNA		11	-1	109499824	111
ENSMUSG00000077759	snoRNA	Gm23528	ENSMUST00000104571	snoRNA		1	1	160645573	132
ENSMUSG00000088885	rRNA	Gm24217	ENSMUST00000158260	rRNA		6	-1	23639956	133
ENSMUSG00000084738	snoRNA	Gm25809	ENSMUST00000122789	snoRNA		15	-1	34288870	52
ENSMUSG00000094394	snRNA	Gm23402	ENSMUST00000178130	snRNA		1	-1	165809742	107
ENSMUSG00000077381	snoRNA	Gm22660	ENSMUST00000104193	snoRNA		4	-1	130857880	130
ENSMUSG00000064646	snoRNA	Gm23300	ENSMUST00000082712	snoRNA		19	1	38071929	125
ENSMUSG00000064772	snRNA	Gm25202	ENSMUST00000082838	snRNA		X	-1	14315591	191
ENSMUSG00000098350	miRNA	Gm27551	ENSMUST00000184258	miRNA		5	1	125479377	77
ENSMUSG00000096195	snRNA	Gm26138	ENSMUST00000179236	snRNA		4	-1	57877495	107
ENSMUSG00000084632	snRNA	Gm23887	ENSMUST00000122683	snRNA		17	-1	28990148	172
ENSMUSG00000088804	snRNA	Gm24076	ENSMUST00000158179	snRNA		18	-1	46474024	94
ENSMUSG00000064665	snoRNA	Gm24460	ENSMUST00000082731	snoRNA		X	-1	151539805	106
ENSMUSG00000095792	snRNA	Gm26296	ENSMUST00000179457	snRNA		15	-1	55262603	62
ENSMUSG00000088223	misc_RNA	Gm22600	ENSMUST00000157598	misc_RNA		11	-1	21197976	269
ENSMUSG00000076011	miRNA	Mir652	ENSMUST00000102057	miRNA		X	1	142739000	98
ENSMUSG00000088257	snoRNA	Gm24286	ENSMUST00000157632	snoRNA		10	1	29395036	128
ENSMUSG00000096249	snRNA	Gm24263	ENSMUST00000104059	snRNA		19	1	23296329	107
ENSMUSG00000064738	snRNA	Gm23054	ENSMUST00000082804	snRNA		3	1	88862919	162
ENSMUSG00000096205	snRNA	Gm22068	ENSMUST00000082761	snRNA		11	1	87426716	164
ENSMUSG00000106196	miRNA	Gm44461	ENSMUST00000116740	miRNA		2	-1	94538069	83
ENSMUSG00000099036	miRNA	Mir378c	ENSMUST00000184478	miRNA		14	-1	46954928	99
ENSMUSG00000064495	snoRNA	Gm24313	ENSMUST00000082561	snoRNA		11	-1	6619940	133
ENSMUSG00000099068	misc_RNA	Gm27861	ENSMUST00000183920	misc_RNA		6	1	52161042	214
ENSMUSG00000065014	snRNA	Gm23509	ENSMUST00000083080	snRNA		14	-1	93138189	160
ENSMUSG00000095060	snoRNA	Gm26188	ENSMUST00000179963	snoRNA		7	-1	59723737	94
ENSMUSG00000099095	miRNA	Mir6376	ENSMUST00000185149	miRNA		6	-1	88104258	131
ENSMUSG00000084569	snRNA	Gm26479	ENSMUST00000122620	snRNA		10	-1	62893514	106
ENSMUSG00000065610	miRNA	Mir29a	ENSMUST00000083676	miRNA		6	-1	31062747	88
ENSMUSG00000095424	snoRNA	Gm24416	ENSMUST00000178874	snoRNA		X	-1	135445632	114
ENSMUSG00000106307	scaRNA	Gm23370	ENSMUST00000199545	scaRNA		1	1	127331812	130
ENSMUSG00000098582	miRNA	Mir7080	ENSMUST00000184815	miRNA		8	1	123130106	67
ENSMUSG00000088044	snRNA	Gm23326	ENSMUST00000157419	snRNA		9	-1	43906002	105
ENSMUSG00000088695	snoRNA	Gm22334	ENSMUST00000158070	snoRNA		2	-1	155653024	133
ENSMUSG00000098906	miRNA	Mir7652	ENSMUST00000185156	miRNA		11	1	55501226	56
ENSMUSG00000077237	snoRNA	Gm22438	ENSMUST00000104049	snoRNA		1	1	107892974	132
ENSMUSG00000089404	misc_RNA	Gm24877	ENSMUST00000158779	misc_RNA		11	1	94958778	116
ENSMUSG00000084717	snRNA	Gm24630	ENSMUST00000122768	snRNA		5	1	150708044	106
ENSMUSG00000065322	snRNA	Gm22055	ENSMUST00000083388	snRNA		4	1	45548743	107
ENSMUSG00000087791	snoRNA	Gm25969	ENSMUST00000157166	snoRNA		5	1	99655701	132
ENSMUSG00000105580	miRNA	Gm44454	ENSMUST00000198541	miRNA		13	1	21753445	138
ENSMUSG00000077879	miRNA	Gm23912	ENSMUST00000104687	miRNA		12	1	109618114	87
ENSMUSG00000099031	miRNA	Mir7240	ENSMUST00000184074	miRNA		8	1	70798135	58
ENSMUSG00000095097	snoRNA	Gm23658	ENSMUST00000083233	snoRNA		19	-1	24942367	132
ENSMUSG00000084547	misc_RNA	Gm24936	ENSMUST00000122598	misc_RNA		6	1	99575891	247
ENSMUSG00000088216	snRNA	Gm22080	ENSMUST00000157591	snRNA		7	-1	91392689	106
ENSMUSG00000096053	miRNA	Gm25943	ENSMUST00000103791	miRNA		2	1	10501109	90
ENSMUSG00000095072	rRNA	Gm24509	ENSMUST00000157086	rRNA		X	1	102838155	101
ENSMUSG00000076366	miRNA	Gm24048	ENSMUST00000102411	miRNA		3	1	135147408	106
ENSMUSG00000077661	rRNA	n-R5s51	ENSMUST00000104473	rRNA		14	-1	118827031	123
ENSMUSG00000065333	snRNA	Gm24928	ENSMUST00000083399	snRNA		16	-1	25702748	107
ENSMUSG00000093965	miRNA	Gm24370	ENSMUST00000178007	miRNA		6	1	73392142	102
ENSMUSG00000092978	miRNA	Gm25070	ENSMUST00000175237	miRNA		15	-1	95879817	102
ENSMUSG00000088400	snRNA	Gm25889	ENSMUST00000157775	snRNA		11	-1	106764741	107
ENSMUSG00000098452	miRNA	Gm27501	ENSMUST00000183599	miRNA		13	-1	66586916	107
ENSMUSG00000096041	snoRNA	Gm22511	ENSMUST00000177628	snoRNA		7	-1	59471982	79
ENSMUSG00000092915	miRNA	Gm24083	ENSMUST00000175174	miRNA		9	-1	108568414	120
ENSMUSG00000084518	misc_RNA	Gm22477	ENSMUST00000122569	misc_RNA		4	1	11928424	316
ENSMUSG00000088833	miRNA	Gm23542	ENSMUST00000158208	miRNA		2	1	10511370	96
ENSMUSG00000070109	miRNA	Mir497b	ENSMUST00000093601	miRNA		11	-1	70234816	125
ENSMUSG00000084630	rRNA	n-R5s159	ENSMUST00000122681	rRNA		7	1	132058641	120
ENSMUSG00000087884	snoRNA	Gm23601	ENSMUST00000157259	snoRNA		10	1	10663154	131
ENSMUSG00000092949	miRNA	Gm23394	ENSMUST00000175208	miRNA		12	-1	55821153	91
ENSMUSG00000088433	snoRNA	Gm24199	ENSMUST00000157808	snoRNA		2	-1	151073790	136
ENSMUSG00000088495	snoRNA	Gm24398	ENSMUST00000157870	snoRNA		11	-1	23172906	109
ENSMUSG00000087775	ribozyme	Rprl2	ENSMUST00000157150	ribozyme		3	1	22251374	290
ENSMUSG00000098735	miRNA	Mir7005	ENSMUST00000185089	miRNA		2	-1	180179823	69
ENSMUSG00000065770	snRNA	Gm22155	ENSMUST00000083836	snRNA		6	-1	6924279	162
ENSMUSG00000077897	miRNA	Mir511	ENSMUST00000104704	miRNA		2	1	14261003	79
ENSMUSG00000065493	miRNA	Mir34a	ENSMUST00000083559	miRNA		4	1	150068454	102
ENSMUSG00000089409	snoRNA	Gm24884	ENSMUST00000158784	snoRNA		4	1	83078511	119
ENSMUSG00000087736	snoRNA	Gm24648	ENSMUST00000157111	snoRNA		17	-1	87053825	132
ENSMUSG00000093019	miRNA	Gm22466	ENSMUST00000175278	miRNA		7	-1	61708773	69
ENSMUSG00000088217	snRNA	Gm22079	ENSMUST00000157592	snRNA		12	-1	108862669	106
ENSMUSG00000065162	snRNA	Gm23645	ENSMUST00000083228	snRNA		11	1	106260206	108
ENSMUSG00000065438	miRNA	Mir377	ENSMUST00000083504	miRNA		12	1	109740510	68
ENSMUSG00000087932	miRNA	Mir1971	ENSMUST00000157307	miRNA		14	-1	78191478	106
ENSMUSG00000065874	snoRNA	Gm25683	ENSMUST00000083940	snoRNA		7	1	118153480	131
ENSMUSG00000065685	snRNA	Gm23732	ENSMUST00000083751	snRNA		12	1	116173313	107
ENSMUSG00000088714	misc_RNA	Gm22726	ENSMUST00000158089	misc_RNA		14	-1	40318250	179
ENSMUSG00000065658	snRNA	Gm23102	ENSMUST00000083724	snRNA		17	-1	94869988	116
ENSMUSG00000087985	snoRNA	Gm22223	ENSMUST00000157360	snoRNA		8	-1	101539708	125
ENSMUSG00000089514	snoRNA	Gm26291	ENSMUST00000158889	snoRNA		17	1	54651936	137
ENSMUSG00000105690	snoRNA	Gm26265	ENSMUST00000196326	snoRNA		8	-1	95757082	133
ENSMUSG00000088104	snoRNA	Gm22380	ENSMUST00000157479	snoRNA		9	1	24351118	95
ENSMUSG00000088367	misc_RNA	Gm26320	ENSMUST00000157742	misc_RNA		4	-1	70412923	306
ENSMUSG00000043623	pseudogene	4933412A08Rik	ENSMUST00000061046	pseudogene		19	1	60226334	1343
ENSMUSG00000076038	miRNA	Gm22774	ENSMUST00000102084	miRNA		17	-1	6131944	109
ENSMUSG00000076227	miRNA	Gm25593	ENSMUST00000102272	miRNA		11	-1	101353437	96
ENSMUSG00000076236	miRNA	Mir682	ENSMUST00000102281	miRNA		13	1	75645046	96
ENSMUSG00000105002	miRNA	Mir6375	ENSMUST00000197176	miRNA		6	-1	85790234	95
ENSMUSG00000093060	miRNA	Mir5104	ENSMUST00000175319	miRNA		10	1	7836381	94
ENSMUSG00000089606	snoRNA	Gm22501	ENSMUST00000158981	snoRNA		2	-1	104228238	127
ENSMUSG00000065272	snoRNA	Snord57	ENSMUST00000083338	snoRNA		2	1	130278016	72
ENSMUSG00000089373	snoRNA	Gm22138	ENSMUST00000158748	snoRNA		9	1	86703819	128
ENSMUSG00000077220	snoRNA	Snord78	ENSMUST00000104032	snoRNA		1	1	161036984	66
ENSMUSG00000093033	miRNA	Gm23630	ENSMUST00000175292	miRNA		2	-1	94184130	104
ENSMUSG00000092848	miRNA	Gm23263	ENSMUST00000175107	miRNA		4	1	137184065	76
ENSMUSG00000065273	snoRNA	Gm25128	ENSMUST00000083339	snoRNA		17	1	35247175	76
ENSMUSG00000076318	miRNA	Mir216b	ENSMUST00000102363	miRNA		11	1	28746191	86
ENSMUSG00000093935	miRNA	Gm25529	ENSMUST00000104850	miRNA		9	-1	39048649	92
ENSMUSG00000088742	miRNA	Gm23222	ENSMUST00000158117	miRNA		5	-1	100500218	76
ENSMUSG00000087912	snoRNA	Gm24916	ENSMUST00000157287	snoRNA		14	-1	31015226	79
ENSMUSG00000064619	snRNA	Gm23975	ENSMUST00000082685	snRNA		4	-1	16861794	106
ENSMUSG00000094391	protein_coding	Btbd35f29	ENSMUST00000179532	protein_coding	principal1	X	1	31117674	1497
ENSMUSG00000106336	miRNA	Mir129b	ENSMUST00000197461	miRNA		2	1	94241378	65
ENSMUSG00000065311	rRNA	n-R5s156	ENSMUST00000083377	rRNA		7	1	99497718	105
ENSMUSG00000089305	misc_RNA	Gm26210	ENSMUST00000158680	misc_RNA		8	1	64931972	91
ENSMUSG00000088734	snoRNA	Gm23896	ENSMUST00000158109	snoRNA		5	1	56736090	130
ENSMUSG00000093319	misc_RNA	Gm27854	ENSMUST00000175578	misc_RNA		8	-1	11696858	244
ENSMUSG00000093762	miRNA	Gm25591	ENSMUST00000177317	miRNA		10	1	108428067	94
ENSMUSG00000092796	miRNA	Gm22692	ENSMUST00000175055	miRNA		2	-1	165908175	125
ENSMUSG00000088669	snoRNA	Gm25336	ENSMUST00000158044	snoRNA		1	-1	154080199	105
ENSMUSG00000093784	snoRNA	Gm22394	ENSMUST00000177209	snoRNA		10	-1	77912711	76
ENSMUSG00000065110	snoRNA	Snord61	ENSMUST00000083176	snoRNA		X	-1	57391519	71
ENSMUSG00000089210	scaRNA	Gm23386	ENSMUST00000158585	scaRNA		11	-1	19693298	144
ENSMUSG00000064765	misc_RNA	Gm26456	ENSMUST00000082831	misc_RNA		3	1	155092018	111
ENSMUSG00000106595	miRNA	Gm44314	ENSMUST00000199263	miRNA		13	1	23746175	138
ENSMUSG00000089459	rRNA	Gm24222	ENSMUST00000158834	rRNA		8	1	15412324	93
ENSMUSG00000088982	snRNA	Gm25600	ENSMUST00000158357	snRNA		4	-1	127108571	106
ENSMUSG00000094681	snRNA	Gm25740	ENSMUST00000180247	snRNA		10	1	46377609	107
ENSMUSG00000092687	snoRNA	Gm25744	ENSMUST00000174946	snoRNA		17	-1	34952075	63
ENSMUSG00000088030	rRNA	Gm24991	ENSMUST00000157405	rRNA		13	-1	23682652	108
ENSMUSG00000088852	snoRNA	Gm24731	ENSMUST00000158227	snoRNA		12	1	45109007	131
ENSMUSG00000088123	misc_RNA	Gm25722	ENSMUST00000157498	misc_RNA		5	1	132801678	279
ENSMUSG00000089153	snRNA	Gm23579	ENSMUST00000158528	snRNA		12	-1	69994892	103
ENSMUSG00000094364	snoRNA	Gm26059	ENSMUST00000177865	snoRNA		7	-1	59468241	79
ENSMUSG00000065164	snRNA	Gm23814	ENSMUST00000083230	snRNA		2	-1	119794043	102
ENSMUSG00000093216	miRNA	Gm25247	ENSMUST00000175475	miRNA		7	1	36430611	90
ENSMUSG00000094137	snRNA	Gm22264	ENSMUST00000178200	snRNA		18	-1	43070406	107
ENSMUSG00000105997	miRNA	Gm44333	ENSMUST00000197168	miRNA		X	1	58794731	107
ENSMUSG00000084521	snoRNA	Gm24183	ENSMUST00000122572	snoRNA		18	-1	55085657	93
ENSMUSG00000088867	rRNA	Gm23071	ENSMUST00000158242	rRNA		6	-1	145038188	115
ENSMUSG00000065559	miRNA	Mir206	ENSMUST00000083625	miRNA		1	1	20679010	73
ENSMUSG00000080596	miRNA	Gm22032	ENSMUST00000116946	miRNA		15	-1	17591681	116
ENSMUSG00000088498	snRNA	Gm24402	ENSMUST00000157873	snRNA		1	-1	151260914	91
ENSMUSG00000077082	miRNA	Gm23766	ENSMUST00000103894	miRNA		10	-1	45095708	80
ENSMUSG00000076126	miRNA	Mir669b	ENSMUST00000102172	miRNA		2	1	10467790	97
ENSMUSG00000098544	miRNA	Mir7211	ENSMUST00000184071	miRNA		10	-1	94586199	63
ENSMUSG00000065738	snoRNA	Gm24494	ENSMUST00000083804	snoRNA		3	-1	153911690	81
ENSMUSG00000098543	misc_RNA	Gm27533	ENSMUST00000183800	misc_RNA		19	-1	5844437	152
ENSMUSG00000099135	snoRNA	Gm27607	ENSMUST00000185162	snoRNA		1	-1	51939095	122
ENSMUSG00000095228	snoRNA	Gm22233	ENSMUST00000157464	snoRNA		X	-1	135506370	114
ENSMUSG00000088231	snRNA	Gm25426	ENSMUST00000157606	snRNA		11	1	54829711	170
ENSMUSG00000065211	snoRNA	Gm26265	ENSMUST00000083277	snoRNA		8	-1	95757084	135
ENSMUSG00000087905	misc_RNA	Gm22037	ENSMUST00000157280	misc_RNA		15	-1	43224920	296
ENSMUSG00000089344	misc_RNA	Gm22664	ENSMUST00000158719	misc_RNA		8	1	112581636	105
ENSMUSG00000095883	snRNA	Gm26430	ENSMUST00000178054	snRNA		18	1	78533458	107
ENSMUSG00000095610	snRNA	Gm26245	ENSMUST00000178491	snRNA		1	1	96617099	107
ENSMUSG00000099152	miRNA	Mir6969	ENSMUST00000183777	miRNA		17	-1	28558501	61
ENSMUSG00000105288	scaRNA	Gm25820	ENSMUST00000198589	scaRNA		3	1	88693931	127
ENSMUSG00000094585	snoRNA	Gm26367	ENSMUST00000104165	snoRNA		14	1	100418483	132
ENSMUSG00000098327	miRNA	Mir7087	ENSMUST00000184840	miRNA		9	-1	45939590	70
ENSMUSG00000096247	snRNA	Gm24268	ENSMUST00000082990	snRNA		X	1	155046610	110
ENSMUSG00000094979	snRNA	Gm25253	ENSMUST00000179958	snRNA		1	-1	10555660	107
ENSMUSG00000095349	snoRNA	Gm26097	ENSMUST00000179642	snoRNA		7	-1	59796997	93
ENSMUSG00000065293	misc_RNA	Gm26124	ENSMUST00000083359	misc_RNA		17	-1	76111304	108
ENSMUSG00000105072	miRNA	Gm44335	ENSMUST00000196879	miRNA		9	-1	44335105	141
ENSMUSG00000088872	miRNA	Gm25865	ENSMUST00000158247	miRNA		12	-1	30458071	104
ENSMUSG00000093004	miRNA	Gm24158	ENSMUST00000175263	miRNA		11	-1	97660327	71
ENSMUSG00000065788	snRNA	Gm22682	ENSMUST00000083854	snRNA		3	1	130205465	107
ENSMUSG00000065585	miRNA	Mir211	ENSMUST00000083651	miRNA		7	1	64205806	106
ENSMUSG00000098276	miRNA	Mir6358	ENSMUST00000184549	miRNA		18	1	76170552	101
ENSMUSG00000077293	snoRNA	Gm24125	ENSMUST00000104105	snoRNA		4	-1	3857613	137
ENSMUSG00000092875	misc_RNA	Gm22649	ENSMUST00000175134	misc_RNA		7	-1	6840121	298
ENSMUSG00000088276	snRNA	Gm23125	ENSMUST00000157651	snRNA		17	1	80104937	106
ENSMUSG00000092888	snRNA	Gm22122	ENSMUST00000175147	snRNA		6	1	48289228	200
ENSMUSG00000077592	snoRNA	Gm26013	ENSMUST00000104404	snoRNA		5	-1	150710964	119
ENSMUSG00000099106	misc_RNA	Gm27899	ENSMUST00000184715	misc_RNA		2	1	174286608	64
ENSMUSG00000094327	miRNA	Gm26398	ENSMUST00000179015	miRNA		2	1	10504647	127
ENSMUSG00000099311	miRNA	Mir6244	ENSMUST00000184156	miRNA		9	1	52115623	117
ENSMUSG00000098864	miRNA	Gm27703	ENSMUST00000184836	miRNA		6	1	122200137	110
ENSMUSG00000089528	snoRNA	Gm22324	ENSMUST00000158903	snoRNA		8	1	62783612	114
ENSMUSG00000065823	rRNA	n-R5s182	ENSMUST00000083889	rRNA		4	1	12812706	107
ENSMUSG00000077834	miRNA	Mir669d	ENSMUST00000104644	miRNA		2	1	10468343	121
ENSMUSG00000088227	snRNA	Gm22597	ENSMUST00000157602	snRNA		18	1	55179840	80
ENSMUSG00000088721	snRNA	Gm22212	ENSMUST00000158096	snRNA		6	-1	63200146	106
ENSMUSG00000088070	misc_RNA	Gm22819	ENSMUST00000157445	misc_RNA		18	1	84822002	303
ENSMUSG00000099221	miRNA	Mir6371	ENSMUST00000184470	miRNA		6	1	50572398	111
ENSMUSG00000106474	miRNA	Gm47294	ENSMUST00000198711	miRNA		1	-1	190483016	88
ENSMUSG00000096642	snRNA	Gm24870	ENSMUST00000179897	snRNA		13	1	103641926	107
ENSMUSG00000105046	miRNA	Gm44455	ENSMUST00000200061	miRNA		2	-1	38225122	82
ENSMUSG00000089214	miRNA	Mir1931	ENSMUST00000158589	miRNA		10	1	93162785	119
ENSMUSG00000088800	snoRNA	Gm24075	ENSMUST00000158175	snoRNA		1	-1	18969833	72
ENSMUSG00000064906	rRNA	n-R5s204	ENSMUST00000082972	rRNA		2	1	119631118	119
ENSMUSG00000088511	snRNA	Gm24435	ENSMUST00000157886	snRNA		3	-1	97140661	110
ENSMUSG00000077264	snoRNA	Gm24429	ENSMUST00000104076	snoRNA		12	1	34895024	132
ENSMUSG00000098389	miRNA	Mir6983	ENSMUST00000183458	miRNA		18	1	61117468	64
ENSMUSG00000088183	snRNA	Gm22215	ENSMUST00000157558	snRNA		17	1	80033514	96
ENSMUSG00000065143	snRNA	Gm25644	ENSMUST00000083209	snRNA		19	-1	51239796	107
ENSMUSG00000096047	rRNA	n-R5s211	ENSMUST00000093689	rRNA		1	1	46374197	119
ENSMUSG00000065440	miRNA	Mirlet7g	ENSMUST00000083506	miRNA		9	1	106178840	88
ENSMUSG00000089292	snRNA	Gm23209	ENSMUST00000158667	snRNA		4	1	150321193	110
ENSMUSG00000065915	snRNA	Gm24445	ENSMUST00000083981	snRNA		8	-1	122982943	107
ENSMUSG00000070178	rRNA	n-R5s71	ENSMUST00000093668	rRNA		11	1	74319792	119
ENSMUSG00000089177	snoRNA	Gm22435	ENSMUST00000158552	snoRNA		X	-1	68684275	128
ENSMUSG00000077144	snoRNA	Gm22938	ENSMUST00000103956	snoRNA		9	-1	76716747	120
ENSMUSG00000098999	misc_RNA	Gm27601	ENSMUST00000184794	misc_RNA		4	1	47593337	127
ENSMUSG00000080577	snRNA	Gm23226	ENSMUST00000116927	snRNA		11	1	72022755	103
ENSMUSG00000088164	snoRNA	Gm23534	ENSMUST00000157539	snoRNA		1	-1	137367247	97
ENSMUSG00000088563	snRNA	Gm23779	ENSMUST00000157938	snRNA		13	-1	21486401	64
ENSMUSG00000098635	misc_RNA	Gm27741	ENSMUST00000185060	misc_RNA		10	-1	13091817	237
ENSMUSG00000070128	miRNA	Mir485	ENSMUST00000093620	miRNA		12	1	109734902	73
ENSMUSG00000089055	snRNA	Gm22675	ENSMUST00000158430	snRNA		2	1	28595127	104
ENSMUSG00000064582	snRNA	Gm25135	ENSMUST00000082648	snRNA		17	1	43454255	143
ENSMUSG00000099223	miRNA	Mir7221	ENSMUST00000184009	miRNA		2	1	92592206	72
ENSMUSG00000088346	snoRNA	Gm22337	ENSMUST00000157721	snoRNA		3	1	115391554	132
ENSMUSG00000084527	snRNA	Gm24185	ENSMUST00000122578	snRNA		3	1	90198682	105
ENSMUSG00000087783	snRNA	Gm23170	ENSMUST00000157158	snRNA		19	-1	36384897	106
ENSMUSG00000065289	snoRNA	Gm23650	ENSMUST00000083355	snoRNA		2	1	130277697	70
ENSMUSG00000064777	snRNA	Gm25204	ENSMUST00000082843	snRNA		14	1	36767425	106
ENSMUSG00000099127	miRNA	Gm27320	ENSMUST00000184892	miRNA		8	-1	105307900	109
ENSMUSG00000065256	snRNA	Gm23972	ENSMUST00000083322	snRNA		13	-1	39859027	165
ENSMUSG00000080526	miRNA	Mir466j	ENSMUST00000116876	miRNA		10	1	60960723	122
ENSMUSG00000094691	miRNA	Gm22908	ENSMUST00000177620	miRNA		12	1	22040913	110
ENSMUSG00000077384	snRNA	Gm22658	ENSMUST00000104196	snRNA		9	-1	15211785	155
ENSMUSG00000098829	miRNA	Mir6354	ENSMUST00000184979	miRNA		1	-1	169019089	116
ENSMUSG00000093317	miRNA	Gm25470	ENSMUST00000175576	miRNA		6	1	15404981	111
ENSMUSG00000064525	snoRNA	Gm26440	ENSMUST00000082591	snoRNA		14	1	57697809	129
ENSMUSG00000089207	rRNA	Gm26213	ENSMUST00000158582	rRNA		16	-1	13969457	110
ENSMUSG00000065379	snoRNA	Gm22743	ENSMUST00000083445	snoRNA		11	-1	104251144	133
ENSMUSG00000093096	miRNA	Mir3968	ENSMUST00000175355	miRNA		11	-1	115448060	100
ENSMUSG00000088456	misc_RNA	Gm26372	ENSMUST00000157831	misc_RNA		14	1	21263624	236
ENSMUSG00000089025	snoRNA	Gm25015	ENSMUST00000158400	snoRNA		12	-1	49578583	128
ENSMUSG00000094201	snRNA	Gm25064	ENSMUST00000179535	snRNA		9	1	63133283	107
ENSMUSG00000088041	snoRNA	Gm25261	ENSMUST00000157416	snoRNA		4	1	131239277	134
ENSMUSG00000065763	snRNA	Gm23847	ENSMUST00000083829	snRNA		7	1	130035094	110
ENSMUSG00000105494	miRNA	Gm44310	ENSMUST00000175424	miRNA		15	1	36583544	126
ENSMUSG00000095714	snoRNA	Gm26467	ENSMUST00000097257	snoRNA		7	-1	59574656	78
ENSMUSG00000099279	miRNA	Mir6408	ENSMUST00000183643	miRNA		10	1	60923023	91
ENSMUSG00000087938	snRNA	Gm26049	ENSMUST00000157313	snRNA		4	-1	41312198	108
ENSMUSG00000065746	snRNA	Gm25005	ENSMUST00000083812	snRNA		18	-1	84742317	156
ENSMUSG00000064688	snRNA	Gm25814	ENSMUST00000082754	snRNA		1	-1	32213239	107
ENSMUSG00000104750	miRNA	n-TStga1	ENSMUST00000199903	miRNA		13	1	23518142	109
ENSMUSG00000088391	snoRNA	Gm26310	ENSMUST00000157766	snoRNA		6	1	27668087	117
ENSMUSG00000088499	snRNA	Gm22654	ENSMUST00000157874	snRNA		17	1	55661637	105
ENSMUSG00000065481	miRNA	Mir346	ENSMUST00000083547	miRNA		14	1	34894609	98
ENSMUSG00000096231	snoRNA	Gm22584	ENSMUST00000177935	snoRNA		7	-1	59713625	92
ENSMUSG00000092679	miRNA	Mir5129	ENSMUST00000174938	miRNA		2	-1	45023177	78
ENSMUSG00000096297	snRNA	Gm23934	ENSMUST00000179111	snRNA		1	1	80135466	107
ENSMUSG00000098535	misc_RNA	Gm27869	ENSMUST00000184327	misc_RNA		2	1	174295071	122
ENSMUSG00000105465	miRNA	Gm44325	ENSMUST00000196757	miRNA		2	-1	120977727	77
ENSMUSG00000064925	snoRNA	Snora62	ENSMUST00000082991	snoRNA		9	1	120130415	149
ENSMUSG00000065659	snRNA	Gm23103	ENSMUST00000083725	snRNA		7	-1	29737424	107
ENSMUSG00000087795	snoRNA	Gm25965	ENSMUST00000157170	snoRNA		3	1	142795102	93
ENSMUSG00000096639	snRNA	Gm22169	ENSMUST00000083229	snRNA		9	-1	68461445	107
ENSMUSG00000084451	snRNA	Gm24594	ENSMUST00000122502	snRNA		13	1	60928086	99
ENSMUSG00000098896	miRNA	Mir3473g	ENSMUST00000183494	miRNA		2	-1	126902385	136
ENSMUSG00000092973	miRNA	Gm25071	ENSMUST00000175232	miRNA		18	-1	80925805	70
ENSMUSG00000077608	snoRNA	Gm22671	ENSMUST00000104420	snoRNA		1	-1	163054951	134
ENSMUSG00000080592	miRNA	Gm22030	ENSMUST00000116942	miRNA		8	-1	35977578	63
ENSMUSG00000088348	snRNA	Gm23865	ENSMUST00000157723	snRNA		2	-1	29931523	97
ENSMUSG00000065824	misc_RNA	Gm26315	ENSMUST00000083890	misc_RNA		2	-1	7076414	321
ENSMUSG00000095615	snRNA	Gm26243	ENSMUST00000179260	snRNA		10	1	79985506	107
ENSMUSG00000077152	snoRNA	Gm24579	ENSMUST00000103964	snoRNA		16	1	8402814	144
ENSMUSG00000089336	snoRNA	Gm24347	ENSMUST00000158711	snoRNA		9	-1	64881925	142
ENSMUSG00000092724	miRNA	Gm25677	ENSMUST00000174983	miRNA		4	1	9669279	72
ENSMUSG00000089351	snRNA	Gm25486	ENSMUST00000158726	snRNA		12	1	98599033	63
ENSMUSG00000088361	misc_RNA	Gm23499	ENSMUST00000157736	misc_RNA		7	1	13374481	268
ENSMUSG00000089345	misc_RNA	Gm22665	ENSMUST00000158720	misc_RNA		1	-1	69921747	275
ENSMUSG00000093947	miRNA	Gm22831	ENSMUST00000102473	miRNA		4	-1	30702057	109
ENSMUSG00000098423	misc_RNA	Gm27993	ENSMUST00000184362	misc_RNA		12	1	86651170	85
ENSMUSG00000095214	snoRNA	Gm25232	ENSMUST00000104502	snoRNA		13	-1	48572384	132
ENSMUSG00000092633	miRNA	Mir3962	ENSMUST00000174892	miRNA		1	1	194822001	64
ENSMUSG00000088971	rRNA	Gm23764	ENSMUST00000158346	rRNA		14	1	102806099	48
ENSMUSG00000088896	snoRNA	Gm22522	ENSMUST00000158271	snoRNA		X	1	158373082	151
ENSMUSG00000065657	snRNA	Gm25337	ENSMUST00000083723	snRNA		11	-1	102549299	104
ENSMUSG00000099255	rRNA	Gm27266	ENSMUST00000184521	rRNA		5	1	131577987	123
ENSMUSG00000093211	miRNA	Gm25250	ENSMUST00000175470	miRNA		9	1	77577714	76
ENSMUSG00000077306	snoRNA	Gm22469	ENSMUST00000104118	snoRNA		14	1	37224869	133
ENSMUSG00000077294	snoRNA	Gm24123	ENSMUST00000104106	snoRNA		X	1	93164902	83
ENSMUSG00000084602	rRNA	n-R5s34	ENSMUST00000122653	rRNA		16	1	37854782	116
ENSMUSG00000089343	misc_RNA	Gm22667	ENSMUST00000158718	misc_RNA		11	1	117132490	328
ENSMUSG00000088750	snRNA	Gm24901	ENSMUST00000158125	snRNA		1	1	33191993	110
ENSMUSG00000076272	miRNA	Mir666	ENSMUST00000102317	miRNA		12	1	109717085	99
ENSMUSG00000105292	miRNA	Gm44299	ENSMUST00000104842	miRNA		8	1	26219461	89
ENSMUSG00000065497	miRNA	Mir410	ENSMUST00000083563	miRNA		12	1	109743715	81
ENSMUSG00000077156	rRNA	n-R5s90	ENSMUST00000103968	rRNA		9	-1	111614015	118
ENSMUSG00000089255	snoRNA	Snora78	ENSMUST00000158630	snoRNA		17	-1	24719803	128
ENSMUSG00000099021	misc_RNA	Rn7s1	ENSMUST00000174924	misc_RNA		12	1	69159295	300
ENSMUSG00000106242	miRNA	Gm44353	ENSMUST00000200618	miRNA		3	1	93388689	138
ENSMUSG00000088644	snRNA	Gm26485	ENSMUST00000158019	snRNA		3	-1	16823312	64
ENSMUSG00000096863	snRNA	Gm22259	ENSMUST00000178926	snRNA		18	-1	52154607	107
ENSMUSG00000098825	misc_RNA	Gm27285	ENSMUST00000183875	misc_RNA		X	1	103606323	127
ENSMUSG00000106580	miRNA	Mir7231	ENSMUST00000196252	miRNA		6	1	122831377	61
ENSMUSG00000065307	snRNA	Gm23247	ENSMUST00000083373	snRNA		11	1	83521156	107
ENSMUSG00000084508	miRNA	Gm25325	ENSMUST00000122559	miRNA		3	-1	103666627	86
ENSMUSG00000099272	miRNA	Mir7093	ENSMUST00000184195	miRNA		X	1	134757631	101
ENSMUSG00000077660	snoRNA	Gm24257	ENSMUST00000104472	snoRNA		9	-1	70148936	131
ENSMUSG00000092794	miRNA	Mir3110	ENSMUST00000175053	miRNA		X	1	38210441	80
ENSMUSG00000094428	miRNA	Gm26443	ENSMUST00000179610	miRNA		7	1	33808117	110
ENSMUSG00000094316	miRNA	Mir297-1	ENSMUST00000103800	miRNA		7	-1	10958512	76
ENSMUSG00000098984	miRNA	Mir6420	ENSMUST00000185032	miRNA		17	1	64440806	102
ENSMUSG00000092805	misc_RNA	Gm26461	ENSMUST00000175064	misc_RNA		9	1	88553236	290
ENSMUSG00000087983	misc_RNA	Gm22225	ENSMUST00000157358	misc_RNA		X	-1	129305073	278
ENSMUSG00000098477	misc_RNA	Gm27853	ENSMUST00000184176	misc_RNA		6	-1	115750615	250
ENSMUSG00000094963	snRNA	Gm22418	ENSMUST00000180326	snRNA		6	1	107001452	107
ENSMUSG00000088875	snoRNA	Gm25862	ENSMUST00000158250	snoRNA		10	-1	62923524	129
ENSMUSG00000096028	snoRNA	Gm25984	ENSMUST00000179129	snoRNA		7	-1	59593372	79
ENSMUSG00000093971	snoRNA	Snord116l4	ENSMUST00000177982	snoRNA		7	-1	59889686	94
ENSMUSG00000089331	snoRNA	Gm24345	ENSMUST00000158706	snoRNA		14	-1	100525367	124
ENSMUSG00000077597	snRNA	Gm26017	ENSMUST00000104409	snRNA		4	1	86509152	74
ENSMUSG00000087832	snRNA	Gm23958	ENSMUST00000157207	snRNA		X	-1	138422819	105
ENSMUSG00000076944	miRNA	Gm22064	ENSMUST00000103756	miRNA		7	1	143780090	66
ENSMUSG00000098621	miRNA	Gm27740	ENSMUST00000185129	miRNA		17	-1	33886733	58
ENSMUSG00000088894	snoRNA	Gm22520	ENSMUST00000158269	snoRNA		19	-1	61013545	129
ENSMUSG00000093921	snRNA	Gm23864	ENSMUST00000177607	snRNA		17	-1	35699309	107
ENSMUSG00000070100	miRNA	Mir362	ENSMUST00000093592	miRNA		X	-1	7242046	65
ENSMUSG00000088105	snoRNA	Gm22379	ENSMUST00000157480	snoRNA		14	1	118775152	131
ENSMUSG00000088938	snRNA	Gm22989	ENSMUST00000158313	snRNA		14	1	49788284	86
ENSMUSG00000077650	snoRNA	Gm23320	ENSMUST00000104462	snoRNA		X	1	75886083	127
ENSMUSG00000089275	snoRNA	Gm24548	ENSMUST00000158650	snoRNA		1	-1	58155088	108
ENSMUSG00000065727	snRNA	Gm26164	ENSMUST00000083793	snRNA		8	1	60079590	104
ENSMUSG00000095969	snRNA	Rnu1a1	ENSMUST00000093684	snRNA		11	1	87422867	164
ENSMUSG00000098467	miRNA	Gm27591	ENSMUST00000184218	miRNA		2	1	174247928	68
ENSMUSG00000093498	miRNA	Mir5615-2	ENSMUST00000176537	miRNA		10	1	81104616	60
ENSMUSG00000087902	misc_RNA	Gm22038	ENSMUST00000157277	misc_RNA		3	-1	82793897	242
ENSMUSG00000064437	snoRNA	Snord49b	ENSMUST00000082503	snoRNA		11	1	62603079	72
ENSMUSG00000098562	miRNA	Mir6910	ENSMUST00000184090	miRNA		10	1	79862587	66
ENSMUSG00000094366	snRNA	Gm23730	ENSMUST00000083236	snRNA		9	-1	70521704	107
ENSMUSG00000089035	snRNA	Gm22157	ENSMUST00000158410	snRNA		13	1	41901651	104
ENSMUSG00000094657	rRNA	n-R5s142	ENSMUST00000178820	rRNA		8	-1	123610135	119
ENSMUSG00000094179	snoRNA	Snord50b	ENSMUST00000178497	snoRNA		9	-1	88521868	72
ENSMUSG00000093828	protein_coding	Ccl27a	ENSMUST00000177905	protein_coding		JH584294.1	1	3094	363
ENSMUSG00000065840	snoRNA	Gm25187	ENSMUST00000083906	snoRNA		2	1	158378222	133
ENSMUSG00000088892	miRNA	Gm22518	ENSMUST00000158267	miRNA		4	-1	45500552	68
ENSMUSG00000105367	miRNA	Gm44500	ENSMUST00000200242	miRNA		X	-1	59693549	100
ENSMUSG00000076012	miRNA	Mir705	ENSMUST00000102058	miRNA		6	-1	85336373	82
ENSMUSG00000087710	snRNA	Gm22235	ENSMUST00000157085	snRNA		17	-1	86703407	110
ENSMUSG00000064542	snoRNA	Gm22980	ENSMUST00000082608	snoRNA		4	-1	117154162	70
ENSMUSG00000105010	miRNA	Mir219b	ENSMUST00000198317	miRNA		2	1	29845647	65
ENSMUSG00000076222	miRNA	Mir297b	ENSMUST00000102268	miRNA		2	1	10511667	109
ENSMUSG00000093298	miRNA	Mir3473b	ENSMUST00000175557	miRNA		10	1	41670739	55
ENSMUSG00000088969	snRNA	Gm22085	ENSMUST00000158344	snRNA		8	-1	107009611	110
ENSMUSG00000094630	rRNA	n-R5s92	ENSMUST00000082810	rRNA		9	-1	115626718	119
ENSMUSG00000104820	miRNA	Gm44474	ENSMUST00000196525	miRNA		8	-1	35764056	127
ENSMUSG00000096184	miRNA	Gm23304	ENSMUST00000180209	miRNA		4	-1	33628961	121
ENSMUSG00000092879	miRNA	Gm22650	ENSMUST00000175138	miRNA		X	1	146999405	105
ENSMUSG00000092920	misc_RNA	Mirt2	ENSMUST00000175179	misc_RNA		15	-1	76267419	285
ENSMUSG00000065466	rRNA	n-R5s89	ENSMUST00000083532	rRNA		9	-1	103011520	104
ENSMUSG00000077255	snoRNA	Gm26078	ENSMUST00000104067	snoRNA		1	1	96762031	128
ENSMUSG00000093828	protein_coding	Ccl27a	ENSMUST00000107987	protein_coding		JH584294.1	1	2012	390
ENSMUSG00000077585	snoRNA	Gm24375	ENSMUST00000104397	snoRNA		8	-1	56521503	132
ENSMUSG00000064550	snRNA	Gm24623	ENSMUST00000082616	snRNA		5	1	96907632	194
ENSMUSG00000095402	snoRNA	Gm25585	ENSMUST00000179469	snoRNA		7	-1	59552187	79
ENSMUSG00000094554	snoRNA	Gm22391	ENSMUST00000180356	snoRNA		7	-1	59606468	79
ENSMUSG00000095336	miRNA	Gm24315	ENSMUST00000177835	miRNA		2	1	10480165	127
ENSMUSG00000089233	misc_RNA	Gm22202	ENSMUST00000158608	misc_RNA		15	1	97935285	311
ENSMUSG00000077687	snoRNA	Gm22497	ENSMUST00000104499	snoRNA		4	1	109537039	131
ENSMUSG00000088158	scaRNA	Scarna3b	ENSMUST00000157533	scaRNA		12	-1	80391751	139
ENSMUSG00000065630	snRNA	Gm24256	ENSMUST00000083696	snRNA		10	-1	48619395	84
ENSMUSG00000096280	snRNA	Gm23287	ENSMUST00000179427	snRNA		4	1	117210844	116
ENSMUSG00000088197	snoRNA	Gm24138	ENSMUST00000157572	snoRNA		2	-1	65376282	114
ENSMUSG00000089530	snRNA	Gm25163	ENSMUST00000158905	snRNA		9	-1	72257139	104
ENSMUSG00000076136	miRNA	Gm24951	ENSMUST00000102182	miRNA		19	-1	7959638	109
ENSMUSG00000089444	snoRNA	Gm22531	ENSMUST00000158819	snoRNA		3	1	81880727	140
ENSMUSG00000106154	miRNA	Mir7232	ENSMUST00000197929	miRNA		6	-1	81895663	74
ENSMUSG00000088213	misc_RNA	Gm22390	ENSMUST00000157588	misc_RNA		2	-1	145481731	325
ENSMUSG00000076377	miRNA	Gm22370	ENSMUST00000102422	miRNA		10	-1	28214121	83
ENSMUSG00000098525	misc_RNA	Gm27365	ENSMUST00000184041	misc_RNA		6	1	17695354	177
ENSMUSG00000104812	miRNA	Gm44329	ENSMUST00000197469	miRNA		1	-1	150063268	112
ENSMUSG00000065847	snoRNA	Gm25188	ENSMUST00000083913	snoRNA		3	1	86100534	122
ENSMUSG00000088445	scaRNA	Gm23557	ENSMUST00000157820	scaRNA		X	-1	93573868	138
ENSMUSG00000099047	miRNA	Mir7029	ENSMUST00000184777	miRNA		5	1	115580949	61
ENSMUSG00000095184	snRNA	Gm26375	ENSMUST00000101829	snRNA		17	-1	13534169	106
ENSMUSG00000084719	misc_RNA	Gm24632	ENSMUST00000122770	misc_RNA		18	1	3860108	323
ENSMUSG00000076284	miRNA	Gm24272	ENSMUST00000102329	miRNA		16	1	73974441	98
ENSMUSG00000064721	snoRNA	Gm25855	ENSMUST00000082787	snoRNA		19	1	8723993	72
ENSMUSG00000098550	miRNA	Mir7079	ENSMUST00000184697	miRNA		8	1	123104975	69
ENSMUSG00000095278	miRNA	Gm27634	ENSMUST00000175060	miRNA		2	-1	38637143	126
ENSMUSG00000077744	snoRNA	Gm26343	ENSMUST00000104556	snoRNA		3	-1	86275362	131
ENSMUSG00000065643	snRNA	Gm25897	ENSMUST00000083709	snRNA		15	-1	99803126	107
ENSMUSG00000105428	miRNA	Mir3068	ENSMUST00000197755	miRNA		12	-1	87437757	79
ENSMUSG00000077411	snoRNA	Gm23749	ENSMUST00000104223	snoRNA		2	-1	108080042	131
ENSMUSG00000087769	snRNA	Gm23986	ENSMUST00000157144	snRNA		8	1	50563241	63
ENSMUSG00000089164	snRNA	Gm24131	ENSMUST00000158539	snRNA		5	-1	141566249	107
ENSMUSG00000088764	snoRNA	Gm24395	ENSMUST00000158139	snoRNA		3	1	153864807	125
ENSMUSG00000088410	snoRNA	Gm24240	ENSMUST00000157785	snoRNA		17	1	83269971	135
ENSMUSG00000088516	snRNA	Gm23044	ENSMUST00000157891	snRNA		10	-1	12793974	100
ENSMUSG00000065406	miRNA	Mirlet7i	ENSMUST00000083472	miRNA		10	-1	122985724	85
ENSMUSG00000106571	miRNA	Gm44395	ENSMUST00000197056	miRNA		9	-1	20031140	153
ENSMUSG00000077557	snoRNA	Gm23706	ENSMUST00000104369	snoRNA		16	-1	8480741	82
ENSMUSG00000077472	snoRNA	Gm24791	ENSMUST00000104284	snoRNA		1	-1	123389931	131
ENSMUSG00000076129	miRNA	Gm22920	ENSMUST00000102175	miRNA		11	-1	102659680	109
ENSMUSG00000093282	miRNA	Gm22566	ENSMUST00000175541	miRNA		10	1	25054140	85
ENSMUSG00000099093	miRNA	Mir7000	ENSMUST00000183506	miRNA		2	-1	92387446	63
ENSMUSG00000096087	snoRNA	Gm24709	ENSMUST00000104123	snoRNA		6	-1	56583846	132
ENSMUSG00000094516	snoRNA	Gm24568	ENSMUST00000177901	snoRNA		8	-1	21095715	92
ENSMUSG00000077201	snoRNA	Gm25614	ENSMUST00000104013	snoRNA		14	-1	58650400	133
ENSMUSG00000079222	protein_coding	AC132444.1	ENSMUST00000111423	protein_coding		GL456221.1	-1	30203	1205
ENSMUSG00000093409	miRNA	Gm25193	ENSMUST00000176615	miRNA		6	-1	120797670	97
ENSMUSG00000104890	miRNA	Mir3084-1	ENSMUST00000198203	miRNA		19	-1	24942303	69
ENSMUSG00000098289	miRNA	Mir6715	ENSMUST00000184990	miRNA		19	1	55192678	57
ENSMUSG00000106544	miRNA	Gm44334	ENSMUST00000196707	miRNA		6	1	76181709	112
ENSMUSG00000094009	miRNA	Gm24167	ENSMUST00000177733	miRNA		2	1	10489410	124
ENSMUSG00000089288	snRNA	Gm26022	ENSMUST00000158663	snRNA		6	1	102862368	108
ENSMUSG00000064739	snRNA	Gm23055	ENSMUST00000082805	snRNA		4	1	132442034	94
ENSMUSG00000093879	snRNA	Gm25457	ENSMUST00000179509	snRNA		1	1	141298100	107
ENSMUSG00000064742	snRNA	Gm24705	ENSMUST00000082808	snRNA		14	1	54581177	107
ENSMUSG00000094922	snoRNA	Gm24759	ENSMUST00000179827	snoRNA		7	-1	59597113	79
ENSMUSG00000095516	miRNA	Gm24135	ENSMUST00000179085	miRNA		15	-1	12572530	101
ENSMUSG00000065237	snRNA	Gm22975	ENSMUST00000083303	snRNA		2	1	74624642	107
ENSMUSG00000095628	snoRNA	Gm24585	ENSMUST00000178104	snoRNA		7	-1	59535334	79
ENSMUSG00000070139	miRNA	Mir532	ENSMUST00000093630	miRNA		X	-1	7248497	96
ENSMUSG00000093236	miRNA	Gm24108	ENSMUST00000175495	miRNA		19	-1	30261517	77
ENSMUSG00000098572	misc_RNA	Gm27443	ENSMUST00000184660	misc_RNA		15	1	102947496	98
ENSMUSG00000055968	pseudogene	Gm9988	ENSMUST00000069786	pseudogene		8	-1	88138517	435
ENSMUSG00000088628	snoRNA	Gm23315	ENSMUST00000158003	snoRNA		2	-1	53700955	109
ENSMUSG00000088925	snoRNA	Gm24297	ENSMUST00000158300	snoRNA		10	1	38213359	68
ENSMUSG00000093807	miRNA	Gm23620	ENSMUST00000116812	miRNA		14	-1	42625037	121
ENSMUSG00000080365	snoRNA	Gm25776	ENSMUST00000116715	snoRNA		12	-1	91573572	143
ENSMUSG00000092762	miRNA	Gm27626	ENSMUST00000175021	miRNA		11	-1	101140509	56
ENSMUSG00000099110	miRNA	Mir6951	ENSMUST00000183910	miRNA		15	-1	38490547	75
ENSMUSG00000076457	miRNA	Mir802	ENSMUST00000103258	miRNA		16	1	93369720	97
ENSMUSG00000065789	snRNA	Gm25869	ENSMUST00000083855	snRNA		3	1	103427437	107
ENSMUSG00000096222	snRNA	Gm25412	ENSMUST00000180258	snRNA		X	1	61938891	107
ENSMUSG00000077185	snoRNA	Gm25091	ENSMUST00000103997	snoRNA		5	1	146834834	71
ENSMUSG00000096613	rRNA	n-R5s102	ENSMUST00000101990	rRNA		8	-1	123542296	119
ENSMUSG00000095020	miRNA	Gm24020	ENSMUST00000180156	miRNA		13	1	62624194	108
ENSMUSG00000095530	snoRNA	Snora19	ENSMUST00000082962	snoRNA		19	-1	60774461	132
ENSMUSG00000096391	snRNA	Gm23686	ENSMUST00000083241	snRNA		3	-1	18177625	164
ENSMUSG00000089188	snoRNA	Gm22942	ENSMUST00000158563	snoRNA		3	1	108441330	124
ENSMUSG00000105724	miRNA	Gm44360	ENSMUST00000200081	miRNA		2	-1	77074352	82
ENSMUSG00000088551	snRNA	Gm22100	ENSMUST00000157926	snRNA		4	-1	101103650	63
ENSMUSG00000084573	rRNA	n-R5s30	ENSMUST00000122624	rRNA		16	-1	5324157	122
ENSMUSG00000116179	protein_coding	Olfr290	ENSMUST00000073468	protein_coding	principal1	7	1	84915781	948
ENSMUSG00000095763	protein_coding	AC124606.2	ENSMUST00000178318	protein_coding		JH584299.1	1	806210	1446
ENSMUSG00000093097	miRNA	Mir3097	ENSMUST00000175356	miRNA		5	1	35021049	67
ENSMUSG00000099131	miRNA	Mir7074	ENSMUST00000183884	miRNA		8	-1	105951699	63
ENSMUSG00000098540	miRNA	Mir7059	ENSMUST00000184825	miRNA		7	-1	126579532	59
ENSMUSG00000088313	snoRNA	Gm26182	ENSMUST00000157688	snoRNA		X	-1	119526659	116
ENSMUSG00000106175	miRNA	Gm44313	ENSMUST00000198018	miRNA		11	-1	58955120	138
ENSMUSG00000093816	miRNA	Gm26445	ENSMUST00000177557	miRNA		10	-1	130592244	109
ENSMUSG00000087881	scaRNA	Gm22442	ENSMUST00000157256	scaRNA		11	-1	69350661	144
ENSMUSG00000077497	snoRNA	Gm23593	ENSMUST00000104309	snoRNA		14	-1	57333485	120
ENSMUSG00000087724	snoRNA	Gm26276	ENSMUST00000157099	snoRNA		X	-1	67595438	109
ENSMUSG00000094665	snRNA	Gm24873	ENSMUST00000179101	snRNA		13	1	17440790	107
ENSMUSG00000088344	snRNA	Gm22336	ENSMUST00000157719	snRNA		8	1	85315140	107
ENSMUSG00000092680	snoRNA	Snord55	ENSMUST00000174939	snoRNA		4	-1	117155848	79
ENSMUSG00000056682	pseudogene	4930465K10Rik	ENSMUST00000056675	pseudogene		18	1	77714210	1238
ENSMUSG00000054957	pseudogene	Gm9959	ENSMUST00000068277	pseudogene		17	1	80728131	390
ENSMUSG00000077167	snoRNA	Gm24119	ENSMUST00000103979	snoRNA		10	-1	91118536	246
ENSMUSG00000089390	snRNA	Gm23021	ENSMUST00000158765	snRNA		11	-1	18802422	169
ENSMUSG00000078027	miRNA	Mir449b	ENSMUST00000104833	miRNA		13	1	113037419	80
ENSMUSG00000094567	snoRNA	Gm25230	ENSMUST00000179740	snoRNA		7	-1	59531593	79
ENSMUSG00000065455	miRNA	Mir21a	ENSMUST00000083521	miRNA		11	-1	86584158	92
ENSMUSG00000084545	rRNA	n-R5s80	ENSMUST00000122596	rRNA		10	-1	105804197	111
ENSMUSG00000088880	misc_RNA	Gm24213	ENSMUST00000158255	misc_RNA		6	-1	19341586	258
ENSMUSG00000065469	miRNA	Mir129-1	ENSMUST00000083535	miRNA		6	1	29022619	73
ENSMUSG00000105770	miRNA	Mir664	ENSMUST00000196796	miRNA		1	1	185242975	69
ENSMUSG00000096302	snoRNA	Gm25210	ENSMUST00000178813	snoRNA		7	-1	59769231	94
ENSMUSG00000088786	misc_RNA	Gm25372	ENSMUST00000158161	misc_RNA		15	1	36028898	255
ENSMUSG00000088150	misc_RNA	Gm26346	ENSMUST00000157525	misc_RNA		5	1	29709634	329
ENSMUSG00000088351	snoRNA	Gm24016	ENSMUST00000157726	snoRNA		4	-1	3835146	68
ENSMUSG00000098885	miRNA	Mir7659	ENSMUST00000184079	miRNA		10	-1	78340207	58
ENSMUSG00000098846	misc_RNA	Gm27905	ENSMUST00000184005	misc_RNA		6	1	6821129	207
ENSMUSG00000098726	miRNA	Mir6417	ENSMUST00000183815	miRNA		5	-1	52136017	116
ENSMUSG00000096850	protein_coding	Gm21748	ENSMUST00000179623	protein_coding	principal1	Y	-1	90839177	309
ENSMUSG00000076977	miRNA	Gm26067	ENSMUST00000103789	miRNA		4	-1	25861348	110
ENSMUSG00000089564	rRNA	Gm24664	ENSMUST00000158939	rRNA		15	1	12980829	100
ENSMUSG00000088359	rRNA	Gm24009	ENSMUST00000157734	rRNA		5	-1	23674381	93
ENSMUSG00000065124	snoRNA	Snora65	ENSMUST00000083190	snoRNA		2	1	32963291	130
ENSMUSG00000089268	miRNA	Mir1961	ENSMUST00000158643	miRNA		5	-1	92788562	112
ENSMUSG00000088066	snRNA	Gm23253	ENSMUST00000157441	snRNA		2	1	71495271	104
ENSMUSG00000092974	misc_RNA	Gm25072	ENSMUST00000175233	misc_RNA		15	-1	79095057	235
ENSMUSG00000099133	misc_RNA	Gm27605	ENSMUST00000184648	misc_RNA		11	-1	96200311	136
ENSMUSG00000093108	miRNA	Mir344f	ENSMUST00000175367	miRNA		7	-1	62046248	68
ENSMUSG00000095282	miRNA	Gm22548	ENSMUST00000174899	miRNA		1	1	67616975	78
ENSMUSG00000096346	snRNA	Gm22887	ENSMUST00000178586	snRNA		5	-1	22534843	107
ENSMUSG00000091105	processed_pseudogene	Mrto4-ps2	ENSMUST00000164169	processed_pseudogene		12	-1	21776707	549
ENSMUSG00000080352	snoRNA	Gm26247	ENSMUST00000116702	snoRNA		7	1	44248090	91
ENSMUSG00000076163	miRNA	Mir701	ENSMUST00000102208	miRNA		5	1	111004144	109
ENSMUSG00000065279	snRNA	Gm25124	ENSMUST00000083345	snRNA		4	1	101271143	164
ENSMUSG00000089446	misc_RNA	Gm22533	ENSMUST00000158821	misc_RNA		4	1	101555095	274
ENSMUSG00000094912	snoRNA	Gm26392	ENSMUST00000179661	snoRNA		7	-1	59527849	79
ENSMUSG00000099245	miRNA	Mir8098	ENSMUST00000184011	miRNA		14	1	62837721	137
ENSMUSG00000089341	misc_RNA	Gm22668	ENSMUST00000158716	misc_RNA		13	-1	54429700	260
ENSMUSG00000106425	miRNA	Mir873b	ENSMUST00000197283	miRNA		4	1	36668510	77
ENSMUSG00000105825	miRNA	Gm44489	ENSMUST00000104619	miRNA		8	-1	110556862	97
ENSMUSG00000065159	snRNA	Gm25482	ENSMUST00000083225	snRNA		19	1	44945022	107
ENSMUSG00000089016	misc_RNA	Gm24883	ENSMUST00000158391	misc_RNA		19	1	30264880	281
ENSMUSG00000093228	miRNA	Gm25748	ENSMUST00000175487	miRNA		1	1	64396334	70
ENSMUSG00000098970	snRNA	Gm27549	ENSMUST00000183508	snRNA		6	-1	41602305	62
ENSMUSG00000094958	protein_coding	3110021N24Rik	ENSMUST00000178992	protein_coding	principal1	4	1	108719649	1812
ENSMUSG00000077547	snRNA	Gm22019	ENSMUST00000104359	snRNA		7	-1	141181311	96
ENSMUSG00000093293	miRNA	Mir3095	ENSMUST00000175552	miRNA		4	-1	58441098	87
ENSMUSG00000093002	snoRNA	Gm24154	ENSMUST00000175261	snoRNA		7	-1	112618225	130
ENSMUSG00000095154	miRNA	Mir344i	ENSMUST00000175488	miRNA		7	-1	62085310	88
ENSMUSG00000064463	snoRNA	Gm25079	ENSMUST00000082529	snoRNA		16	1	35382045	203
ENSMUSG00000104796	miRNA	Gm44354	ENSMUST00000196017	miRNA		6	-1	29397576	143
ENSMUSG00000065072	snoRNA	Gm24533	ENSMUST00000083138	snoRNA		6	-1	73141680	196
ENSMUSG00000070107	miRNA	Mir489	ENSMUST00000093599	miRNA		6	-1	3722003	107
ENSMUSG00000088097	misc_RNA	Gm23671	ENSMUST00000157472	misc_RNA		X	-1	82897499	103
ENSMUSG00000099109	miRNA	Mir7115	ENSMUST00000184275	miRNA		11	1	70438255	64
ENSMUSG00000088700	rRNA	Gm25554	ENSMUST00000158075	rRNA		2	1	104289860	113
ENSMUSG00000065509	miRNA	Mir421	ENSMUST00000083575	miRNA		X	-1	103572996	76
ENSMUSG00000088679	snRNA	Gm23665	ENSMUST00000158054	snRNA		15	-1	46944448	62
ENSMUSG00000092777	miRNA	Gm26194	ENSMUST00000175036	miRNA		X	-1	39976371	71
ENSMUSG00000104948	miRNA	Gm44376	ENSMUST00000197570	miRNA		X	1	166957099	128
ENSMUSG00000087991	misc_RNA	Gm25057	ENSMUST00000157366	misc_RNA		15	-1	99174937	88
ENSMUSG00000088432	snRNA	Gm25384	ENSMUST00000157807	snRNA		1	-1	128515219	105
ENSMUSG00000092799	miRNA	Gm25927	ENSMUST00000175058	miRNA		17	-1	17830459	117
ENSMUSG00000094799	protein_coding	AC125149.4	ENSMUST00000115928	protein_coding		GL456210.1	1	147792	366
ENSMUSG00000095292	miRNA	Mir344d-3	ENSMUST00000175458	miRNA		7	-1	61726328	80
ENSMUSG00000080530	miRNA	Gm25540	ENSMUST00000116880	miRNA		11	-1	109466431	121
ENSMUSG00000077398	snoRNA	Gm24334	ENSMUST00000104210	snoRNA		12	-1	104419400	128
ENSMUSG00000077541	snRNA	Gm22021	ENSMUST00000104353	snRNA		14	1	104591094	107
ENSMUSG00000088138	snRNA	Gm22894	ENSMUST00000157513	snRNA		9	1	102373118	103
ENSMUSG00000077202	snoRNA	Gm25612	ENSMUST00000104014	snoRNA		1	1	134505338	126
ENSMUSG00000105037	snoRNA	Gm25203	ENSMUST00000200458	snoRNA		12	-1	102253687	216
ENSMUSG00000099089	miRNA	Gm27921	ENSMUST00000183968	miRNA		7	-1	54008580	108
ENSMUSG00000065196	snoRNA	Snord85	ENSMUST00000083262	snoRNA		4	1	130749634	73
ENSMUSG00000076987	miRNA	Gm24115	ENSMUST00000103799	miRNA		2	-1	109148698	110
ENSMUSG00000088156	misc_RNA	Gm26350	ENSMUST00000157531	misc_RNA		15	1	10051826	288
ENSMUSG00000088203	misc_RNA	Gm23755	ENSMUST00000157578	misc_RNA		13	-1	45294996	343
ENSMUSG00000094812	snRNA	Gm22614	ENSMUST00000178300	snRNA		3	1	96488729	165
ENSMUSG00000084431	rRNA	n-R5s48	ENSMUST00000122482	rRNA		14	1	77530398	110
ENSMUSG00000098973	miRNA	Mir6236	ENSMUST00000184437	miRNA		9	1	110281287	123
ENSMUSG00000098690	misc_RNA	Gm27316	ENSMUST00000184884	misc_RNA		5	1	139312424	277
ENSMUSG00000065027	snRNA	Gm25201	ENSMUST00000083093	snRNA		17	-1	47840985	170
ENSMUSG00000077086	miRNA	Mir669o	ENSMUST00000103898	miRNA		2	1	10514300	96
ENSMUSG00000075829	snRNA	Gm23692	ENSMUST00000101881	snRNA		16	1	94429073	160
ENSMUSG00000087780	snRNA	Gm23167	ENSMUST00000157155	snRNA		12	-1	4999368	103
ENSMUSG00000093254	miRNA	Mir5126	ENSMUST00000175513	miRNA		1	1	84695839	77
ENSMUSG00000077323	snRNA	Rnu11	ENSMUST00000104135	snRNA		4	-1	132270213	134
ENSMUSG00000089289	snoRNA	Gm26021	ENSMUST00000158664	snoRNA		6	1	29234434	131
ENSMUSG00000094049	snoRNA	Gm26283	ENSMUST00000178625	snoRNA		7	-1	59490639	79
ENSMUSG00000093232	miRNA	Gm24111	ENSMUST00000175491	miRNA		13	1	48537825	97
ENSMUSG00000089469	misc_RNA	Gm23704	ENSMUST00000158844	misc_RNA		14	1	54117054	340
ENSMUSG00000064715	snRNA	Gm24207	ENSMUST00000082781	snRNA		14	-1	105276986	108
ENSMUSG00000065606	miRNA	Mir16-2	ENSMUST00000083672	miRNA		3	1	69009902	95
ENSMUSG00000065563	miRNA	Mir103-2	ENSMUST00000083629	miRNA		2	1	131288052	86
ENSMUSG00000084704	rRNA	n-R5s216	ENSMUST00000122755	rRNA		1	-1	104881035	112
ENSMUSG00000084552	snRNA	Gm24840	ENSMUST00000122603	snRNA		5	1	123628201	147
ENSMUSG00000084740	snRNA	Gm25294	ENSMUST00000122791	snRNA		1	1	25451071	104
ENSMUSG00000075162	pseudogene	Gm10812	ENSMUST00000099864	pseudogene		10	1	44004154	546
ENSMUSG00000088708	snRNA	Gm25558	ENSMUST00000158083	snRNA		9	1	50887950	106
ENSMUSG00000098898	miRNA	Gm27754	ENSMUST00000183340	miRNA		10	-1	26356857	126
ENSMUSG00000089235	scaRNA	Gm23119	ENSMUST00000158610	scaRNA		18	-1	74778700	140
ENSMUSG00000065751	snRNA	Gm23345	ENSMUST00000083817	snRNA		7	-1	111947330	150
ENSMUSG00000077680	snoRNA	Gm22495	ENSMUST00000104492	snoRNA		18	1	23147094	126
ENSMUSG00000087875	snRNA	Gm26104	ENSMUST00000157250	snRNA		1	1	176700617	108
ENSMUSG00000078912	protein_coding	Gm11011	ENSMUST00000109160	protein_coding	principal1	2	-1	169587745	258
ENSMUSG00000096189	miRNA	Mir344h-2	ENSMUST00000175612	miRNA		7	-1	61742425	60
ENSMUSG00000088891	snoRNA	Gm22516	ENSMUST00000158266	snoRNA		2	1	31189691	124
ENSMUSG00000074564	protein_coding	Gm10720	ENSMUST00000099050	protein_coding	principal1	9	1	3015654	669
ENSMUSG00000098531	miRNA	Mir7041	ENSMUST00000183891	miRNA		6	-1	94606415	52
ENSMUSG00000088182	rRNA	Gm22216	ENSMUST00000157557	rRNA		8	1	35747449	114
ENSMUSG00000088949	rRNA	Gm24931	ENSMUST00000158324	rRNA		5	-1	92118283	107
ENSMUSG00000075973	rRNA	n-R5s64	ENSMUST00000102019	rRNA		12	-1	85718595	119
ENSMUSG00000077796	snoRNA	Gm25562	ENSMUST00000104608	snoRNA		9	1	52291199	133
ENSMUSG00000064444	snRNA	Gm26227	ENSMUST00000082510	snRNA		2	-1	136026251	101
ENSMUSG00000088461	misc_RNA	Gm24748	ENSMUST00000157836	misc_RNA		1	1	191196906	108
ENSMUSG00000088518	snoRNA	Gm24438	ENSMUST00000157893	snoRNA		X	1	116748842	115
ENSMUSG00000094165	miRNA	Gm26073	ENSMUST00000179906	miRNA		2	1	10473351	127
ENSMUSG00000074412	processed_pseudogene	Gm10689	ENSMUST00000098864	processed_pseudogene		8	1	25454273	432
ENSMUSG00000088468	snRNA	Gm24750	ENSMUST00000157843	snRNA		12	1	61920574	104
ENSMUSG00000062783	protein_coding	Csprs	ENSMUST00000078827	protein_coding		GL456221.1	-1	163011	2719
ENSMUSG00000065494	miRNA	Mir28a	ENSMUST00000083560	miRNA		16	1	24827855	86
ENSMUSG00000084703	snRNA	Gm22985	ENSMUST00000122754	snRNA		9	-1	88526794	116
ENSMUSG00000065040	snRNA	Gm24977	ENSMUST00000083106	snRNA		4	-1	25566822	163
ENSMUSG00000094741	protein_coding	AC140325.2	ENSMUST00000178291	protein_coding		GL456354.1	1	6366	1224
ENSMUSG00000088279	misc_RNA	Gm23120	ENSMUST00000157654	misc_RNA		11	1	107827374	287
ENSMUSG00000077954	miRNA	Mir297a-4	ENSMUST00000104761	miRNA		2	1	10517067	98
ENSMUSG00000088246	miRNA	Gm25911	ENSMUST00000157621	miRNA		1	-1	167340424	56
ENSMUSG00000096842	processed_pseudogene	Gm10736	ENSMUST00000179668	processed_pseudogene		13	-1	111593611	78
ENSMUSG00000105232	miRNA	Gm47284	ENSMUST00000198845	miRNA		7	1	109521249	120
ENSMUSG00000088535	snRNA	Gm24997	ENSMUST00000157910	snRNA		3	1	44983200	105
ENSMUSG00000089399	snRNA	Gm23312	ENSMUST00000158774	snRNA		5	-1	9758940	102
ENSMUSG00000065319	snRNA	Gm26066	ENSMUST00000083385	snRNA		17	1	84624402	109
ENSMUSG00000104746	miRNA	Gm44352	ENSMUST00000196358	miRNA		6	1	55533506	110
ENSMUSG00000093010	miRNA	Gm22460	ENSMUST00000175269	miRNA		13	-1	3957242	124
ENSMUSG00000088153	misc_RNA	Gm26348	ENSMUST00000157528	misc_RNA		1	1	10166539	240
ENSMUSG00000105400	scaRNA	Gm22897	ENSMUST00000197860	scaRNA		5	-1	4985238	128
ENSMUSG00000098595	misc_RNA	Gm27957	ENSMUST00000184054	misc_RNA		15	1	62175422	127
ENSMUSG00000080360	miRNA	Gm25779	ENSMUST00000116710	miRNA		4	-1	153013584	95
ENSMUSG00000064831	snRNA	Gm25698	ENSMUST00000082897	snRNA		11	-1	16732711	107
ENSMUSG00000088956	snoRNA	Gm24945	ENSMUST00000158331	snoRNA		11	1	60804578	126
ENSMUSG00000064943	snRNA	Gm23240	ENSMUST00000083009	snRNA		1	-1	48462293	121
ENSMUSG00000092985	miRNA	Mir378b	ENSMUST00000175244	miRNA		11	1	88352773	92
ENSMUSG00000089605	rRNA	Gm22093	ENSMUST00000158980	rRNA		6	1	111603252	111
ENSMUSG00000098408	miRNA	Mir6237	ENSMUST00000183808	miRNA		9	1	9894431	91
ENSMUSG00000099222	miRNA	Mir7213	ENSMUST00000183847	miRNA		15	-1	79999026	57
ENSMUSG00000092650	miRNA	Gm25241	ENSMUST00000174909	miRNA		13	1	81065477	84
ENSMUSG00000064489	snRNA	Gm23296	ENSMUST00000082555	snRNA		12	-1	52604591	107
ENSMUSG00000096913	snoRNA	Gm24866	ENSMUST00000178338	snoRNA		7	-1	59393639	79
ENSMUSG00000093190	miRNA	Gm22875	ENSMUST00000175449	miRNA		2	1	24936831	126
ENSMUSG00000096423	snRNA	Gm24978	ENSMUST00000179782	snRNA		4	1	16675923	107
ENSMUSG00000064487	snoRNA	Gm23736	ENSMUST00000082553	snoRNA		12	1	109680800	75
ENSMUSG00000089570	miRNA	Mir669m-1	ENSMUST00000158945	miRNA		2	1	10512790	98
ENSMUSG00000084571	rRNA	n-R5s201	ENSMUST00000122622	rRNA		2	1	105997032	116
ENSMUSG00000096675	snoRNA	Gm24519	ENSMUST00000104507	snoRNA		13	-1	76604450	132
ENSMUSG00000093746	miRNA	Mir5622	ENSMUST00000175928	miRNA		2	1	152865067	60
ENSMUSG00000094030	protein_coding	Gm21833	ENSMUST00000177665	protein_coding	principal1	16	1	82828382	1500
ENSMUSG00000090395	IG_LV_gene	Ighv5-8	ENSMUST00000166255	IG_LV_gene	principal1	12	1	113654967	278
ENSMUSG00000099211	miRNA	Gm27684	ENSMUST00000183778	miRNA		7	1	115172273	80
ENSMUSG00000065603	miRNA	Mir218-1	ENSMUST00000083669	miRNA		5	1	48223942	110
ENSMUSG00000093690	miRNA	Mir5619	ENSMUST00000176065	miRNA		5	1	104048003	61
ENSMUSG00000078840	protein_coding	Gm10999	ENSMUST00000108743	protein_coding	principal1	8	-1	129131661	207
ENSMUSG00000093283	misc_RNA	Gm22567	ENSMUST00000175542	misc_RNA		18	1	65427469	342
ENSMUSG00000088135	snoRNA	Gm22588	ENSMUST00000157510	snoRNA		11	1	29849461	140
ENSMUSG00000077279	snoRNA	Gm22777	ENSMUST00000104091	snoRNA		13	-1	56930948	129
ENSMUSG00000099030	miRNA	Mir6394	ENSMUST00000184738	miRNA		7	1	96305667	99
ENSMUSG00000088631	rRNA	Gm22311	ENSMUST00000158006	rRNA		11	-1	83764747	110
ENSMUSG00000065445	miRNA	Mir143	ENSMUST00000083511	miRNA		18	-1	61649258	63
ENSMUSG00000105743	miRNA	Mir1949	ENSMUST00000199259	miRNA		18	1	35554567	70
ENSMUSG00000078042	miRNA	Gm24855	ENSMUST00000104848	miRNA		6	-1	121325676	97
ENSMUSG00000065388	snRNA	Gm23099	ENSMUST00000083454	snRNA		7	-1	19460935	139
ENSMUSG00000064709	snRNA	Gm22509	ENSMUST00000082775	snRNA		8	-1	76274450	107
ENSMUSG00000092664	miRNA	Gm22406	ENSMUST00000174923	miRNA		14	1	105816908	93
ENSMUSG00000090765	IG_LV_gene	Ighv1-13	ENSMUST00000095364	IG_LV_gene	principal1	12	1	114630680	294
ENSMUSG00000065532	miRNA	Mir187	ENSMUST00000083598	miRNA		18	-1	24429170	61
ENSMUSG00000088310	scaRNA	Gm26183	ENSMUST00000157685	scaRNA		19	1	11695041	139
ENSMUSG00000062461	processed_pseudogene	Rpl27a-ps4	ENSMUST00000080866	processed_pseudogene		13	1	98904224	447
ENSMUSG00000077435	snoRNA	Gm22590	ENSMUST00000104247	snoRNA		X	1	121011835	128
ENSMUSG00000094820	snRNA	Gm23805	ENSMUST00000180129	snRNA		1	1	175904545	107
ENSMUSG00000064899	snoRNA	Snord118	ENSMUST00000082965	snoRNA		11	1	69073427	135
ENSMUSG00000096829	miRNA	Gm23771	ENSMUST00000178702	miRNA		1	1	29985934	110
ENSMUSG00000095052	snRNA	Gm25672	ENSMUST00000180111	snRNA		5	-1	106072433	107
ENSMUSG00000095849	miRNA	Gm24300	ENSMUST00000177809	miRNA		13	1	50118006	109
ENSMUSG00000088650	snRNA	Gm24854	ENSMUST00000158025	snRNA		5	-1	124717174	98
ENSMUSG00000106349	miRNA	Gm44387	ENSMUST00000196298	miRNA		8	-1	52041568	145
ENSMUSG00000088857	snoRNA	Gm24726	ENSMUST00000158232	snoRNA		10	-1	7848481	121
ENSMUSG00000088261	snoRNA	Gm24781	ENSMUST00000157636	snoRNA		8	-1	86965619	117
ENSMUSG00000064717	snoRNA	Gm24208	ENSMUST00000082783	snoRNA		12	-1	13163763	135
ENSMUSG00000065389	snRNA	Gm23100	ENSMUST00000083455	snRNA		7	1	110003578	141
ENSMUSG00000080504	miRNA	Mir669d-2	ENSMUST00000116854	miRNA		2	1	10471644	86
ENSMUSG00000069475	protein_coding	Gm6020	ENSMUST00000092094	protein_coding	principal1	19	1	61183890	66
ENSMUSG00000105187	snoRNA	Gm23377	ENSMUST00000196828	snoRNA		9	-1	110121816	138
ENSMUSG00000065872	snRNA	Gm25681	ENSMUST00000083938	snRNA		3	1	109863780	106
ENSMUSG00000089576	misc_RNA	Gm23007	ENSMUST00000158951	misc_RNA		2	-1	21197866	177
ENSMUSG00000087973	snoRNA	Gm23716	ENSMUST00000157348	snoRNA		2	1	85420137	144
ENSMUSG00000089239	snoRNA	Gm22200	ENSMUST00000158614	snoRNA		18	-1	34941300	67
ENSMUSG00000077522	snoRNA	Gm25377	ENSMUST00000104334	snoRNA		5	-1	39521104	129
ENSMUSG00000089151	miRNA	Mir1950	ENSMUST00000158526	miRNA		19	1	34965396	74
ENSMUSG00000077438	snoRNA	Gm22595	ENSMUST00000104250	snoRNA		9	-1	103022466	130
ENSMUSG00000077577	snRNA	Gm24890	ENSMUST00000104389	snRNA		14	-1	70428597	102
ENSMUSG00000076135	miRNA	Gm24276	ENSMUST00000102181	miRNA		1	1	8816138	110
ENSMUSG00000064741	snoRNA	Snord14a	ENSMUST00000082807	snoRNA		7	-1	116333257	87
ENSMUSG00000098568	miRNA	Mir6987	ENSMUST00000184789	miRNA		19	-1	5679076	73
ENSMUSG00000077019	miRNA	Gm22191	ENSMUST00000103831	miRNA		14	-1	40215241	110
ENSMUSG00000106600	miRNA	Mir6915	ENSMUST00000198839	miRNA		10	1	128388832	69
ENSMUSG00000051548	processed_pseudogene	Gm6365	ENSMUST00000054711	processed_pseudogene		19	-1	11878358	744
ENSMUSG00000098680	miRNA	Mir6898	ENSMUST00000184898	miRNA		1	-1	36348758	77
ENSMUSG00000104734	miRNA	Mir669a-5	ENSMUST00000197439	miRNA		2	1	10481761	87
ENSMUSG00000077328	snoRNA	Gm25832	ENSMUST00000104140	snoRNA		1	1	66866797	130
ENSMUSG00000088811	snRNA	Gm22381	ENSMUST00000158186	snRNA		11	1	73756037	107
ENSMUSG00000098263	miRNA	Mir6938	ENSMUST00000184173	miRNA		12	-1	85245985	63
ENSMUSG00000098437	miRNA	Mir195b	ENSMUST00000184814	miRNA		2	1	56785811	97
ENSMUSG00000093140	miRNA	Mir28b	ENSMUST00000175399	miRNA		8	1	73016512	80
ENSMUSG00000104880	miRNA	Gm47296	ENSMUST00000197692	miRNA		11	1	5038204	104
ENSMUSG00000095182	snoRNA	Gm26374	ENSMUST00000179737	snoRNA		7	-1	59587754	79
ENSMUSG00000106521	miRNA	Gm44343	ENSMUST00000196702	miRNA		7	-1	127047252	90
ENSMUSG00000088059	snoRNA	Mir1949	ENSMUST00000157434	snoRNA		18	1	35554492	141
ENSMUSG00000093251	miRNA	Gm22932	ENSMUST00000175510	miRNA		16	1	10273750	72
ENSMUSG00000087754	snRNA	Gm23470	ENSMUST00000157129	snRNA		14	-1	49001836	120
ENSMUSG00000077614	snoRNA	Gm25500	ENSMUST00000104426	snoRNA		9	1	15312552	123
ENSMUSG00000065047	misc_RNA	Gm24045	ENSMUST00000083113	misc_RNA		4	1	114987964	98
ENSMUSG00000077325	snoRNA	Gm25833	ENSMUST00000104137	snoRNA		6	1	68532744	133
ENSMUSG00000064429	snRNA	Gm22747	ENSMUST00000082495	snRNA		7	1	127079481	107
ENSMUSG00000087742	snoRNA	Gm25152	ENSMUST00000157117	snoRNA		3	1	27108982	114
ENSMUSG00000089223	snRNA	Gm25048	ENSMUST00000158598	snRNA		11	-1	98423380	91
ENSMUSG00000095250	protein_coding	AC133103.4	ENSMUST00000179211	protein_coding		GL456211.1	-1	32396	366
ENSMUSG00000092837	ribozyme	Rpph1	ENSMUST00000175096	ribozyme		14	-1	50807767	319
ENSMUSG00000098689	miRNA	Mir6345	ENSMUST00000184286	miRNA		1	1	93352158	128
ENSMUSG00000076241	miRNA	Mir543	ENSMUST00000102286	miRNA		12	1	109717258	76
ENSMUSG00000088368	misc_RNA	Gm26323	ENSMUST00000157743	misc_RNA		2	1	23823053	175
ENSMUSG00000092636	rRNA	Gm26381	ENSMUST00000174895	rRNA		16	1	41217745	92
ENSMUSG00000087853	misc_RNA	Gm22794	ENSMUST00000157228	misc_RNA		10	-1	115257929	306
ENSMUSG00000089043	misc_RNA	Gm24359	ENSMUST00000158418	misc_RNA		12	-1	35000557	221
ENSMUSG00000096628	miRNA	Mir871	ENSMUST00000104763	miRNA		X	-1	66810504	77
ENSMUSG00000096110	snoRNA	Gm26270	ENSMUST00000178690	snoRNA		7	-1	59716152	94
ENSMUSG00000065430	miRNA	Mir26a-2	ENSMUST00000083496	miRNA		10	1	126995530	84
ENSMUSG00000095585	protein_coding	CR974586.2	ENSMUST00000179075	protein_coding		JH584293.1	-1	43114	312
ENSMUSG00000096282	miRNA	Gm22254	ENSMUST00000179186	miRNA		6	-1	74505164	110
ENSMUSG00000093071	miRNA	Gm25951	ENSMUST00000175330	miRNA		4	1	140717043	64
ENSMUSG00000076309	miRNA	Mir147	ENSMUST00000102354	miRNA		2	1	122640803	79
ENSMUSG00000076950	miRNA	Gm24933	ENSMUST00000103762	miRNA		2	-1	16960018	110
ENSMUSG00000080519	miRNA	Gm22194	ENSMUST00000116869	miRNA		10	1	11940973	95
ENSMUSG00000096202	snRNA	Gm22069	ENSMUST00000179911	snRNA		9	-1	45634812	107
ENSMUSG00000076956	miRNA	Mir297a-3	ENSMUST00000103768	miRNA		2	1	10515820	102
ENSMUSG00000093056	misc_RNA	Gm24812	ENSMUST00000175315	misc_RNA		X	-1	87899488	284
ENSMUSG00000093051	miRNA	Gm24813	ENSMUST00000175310	miRNA		17	1	63347671	84
ENSMUSG00000096627	snRNA	Gm25024	ENSMUST00000179667	snRNA		16	-1	36188277	104
ENSMUSG00000077644	snoRNA	Gm24982	ENSMUST00000104456	snoRNA		7	-1	114832514	132
ENSMUSG00000105381	miRNA	Mir7234	ENSMUST00000199151	miRNA		7	1	73819590	52
ENSMUSG00000084512	misc_RNA	Gm22482	ENSMUST00000122563	misc_RNA		19	-1	32970308	359
ENSMUSG00000105025	snoRNA	Rnu3b1	ENSMUST00000200547	snoRNA		11	1	87443237	215
ENSMUSG00000089394	snRNA	Gm23025	ENSMUST00000158769	snRNA		3	1	86191416	111
ENSMUSG00000094293	protein_coding	Gm3893	ENSMUST00000178882	protein_coding	principal1	4	1	42091207	909
ENSMUSG00000088920	misc_RNA	Gm24294	ENSMUST00000158295	misc_RNA		18	1	24761163	277
ENSMUSG00000065882	rRNA	n-R5s168	ENSMUST00000083948	rRNA		6	1	140319630	104
ENSMUSG00000099229	misc_RNA	Gm27383	ENSMUST00000184418	misc_RNA		6	1	52263058	361
ENSMUSG00000065028	snoRNA	Gm25200	ENSMUST00000083094	snoRNA		8	1	118120954	130
ENSMUSG00000105409	miRNA	Gm44318	ENSMUST00000196884	miRNA		X	1	59854661	69
ENSMUSG00000099189	misc_RNA	Gm27875	ENSMUST00000184425	misc_RNA		X	1	103493574	123
ENSMUSG00000093172	miRNA	Mir3112	ENSMUST00000175431	miRNA		X	1	134075316	82
ENSMUSG00000098852	miRNA	Gm27392	ENSMUST00000185041	miRNA		10	-1	85284333	101
ENSMUSG00000096237	protein_coding	CT868723.1	ENSMUST00000177565	protein_coding		JH584294.1	-1	144557	3801
ENSMUSG00000096585	miRNA	Gm22917	ENSMUST00000180116	miRNA		1	1	96303146	110
ENSMUSG00000077149	snoRNA	Gm22934	ENSMUST00000103961	snoRNA		7	1	82994835	132
ENSMUSG00000098596	miRNA	Mir7226	ENSMUST00000184953	miRNA		4	-1	118210564	60
ENSMUSG00000077757	snoRNA	Gm23532	ENSMUST00000104569	snoRNA		5	-1	52959462	112
ENSMUSG00000098763	misc_RNA	Nkx2-2os	ENSMUST00000184407	misc_RNA		2	1	147307181	458
ENSMUSG00000065791	snRNA	Gm25516	ENSMUST00000083857	snRNA		2	-1	147874878	107
ENSMUSG00000065155	snRNA	Gm25481	ENSMUST00000083221	snRNA		X	1	9317819	158
ENSMUSG00000088240	snoRNA	Gm22915	ENSMUST00000157615	snoRNA		5	1	93073861	136
ENSMUSG00000088483	misc_RNA	Gm23642	ENSMUST00000157858	misc_RNA		17	-1	48692707	258
ENSMUSG00000077468	snoRNA	Gm26416	ENSMUST00000104280	snoRNA		15	-1	31194338	134
ENSMUSG00000075228	pseudogene	Gm10813	ENSMUST00000099936	pseudogene		16	-1	36235697	90
ENSMUSG00000065424	miRNA	Mir9-2	ENSMUST00000083490	miRNA		13	1	83738814	72
ENSMUSG00000092790	miRNA	Gm22693	ENSMUST00000175049	miRNA		1	1	49095444	442
ENSMUSG00000088979	snoRNA	Gm23758	ENSMUST00000158354	snoRNA		14	1	52276531	90
ENSMUSG00000093831	snRNA	Gm23144	ENSMUST00000180226	snRNA		15	1	88835300	107
ENSMUSG00000065782	snoRNA	Gm22680	ENSMUST00000083848	snoRNA		19	1	8725341	69
ENSMUSG00000099166	misc_RNA	Gm27715	ENSMUST00000184714	misc_RNA		2	-1	105122051	260
ENSMUSG00000104729	miRNA	Gm44471	ENSMUST00000197963	miRNA		12	-1	113063438	100
ENSMUSG00000098612	miRNA	Mir6241	ENSMUST00000184225	miRNA		14	1	118258634	103
ENSMUSG00000089171	snoRNA	Gm22430	ENSMUST00000158546	snoRNA		X	1	104616865	107
ENSMUSG00000091731	protein_coding	Gm17542	ENSMUST00000169859	protein_coding	principal1	10	-1	58718210	99
ENSMUSG00000088918	snRNA	Gm22612	ENSMUST00000158293	snRNA		X	1	48307043	101
ENSMUSG00000065516	miRNA	Mir214	ENSMUST00000083582	miRNA		1	1	162223368	110
ENSMUSG00000065596	miRNA	Mir184	ENSMUST00000083662	miRNA		9	-1	89802328	69
ENSMUSG00000065511	miRNA	Mir129-2	ENSMUST00000083577	miRNA		2	-1	94241453	90
ENSMUSG00000095051	miRNA	Gm25673	ENSMUST00000179957	miRNA		2	1	10502191	127
ENSMUSG00000087861	snRNA	Gm24440	ENSMUST00000157236	snRNA		16	-1	24406417	63
ENSMUSG00000080681	miRNA	Gm23990	ENSMUST00000117031	miRNA		11	1	105597625	117
ENSMUSG00000093054	miRNA	Gm24811	ENSMUST00000175313	miRNA		3	-1	117848652	100
ENSMUSG00000084502	misc_RNA	Gm23791	ENSMUST00000122553	misc_RNA		9	-1	76773524	293
ENSMUSG00000094572	miRNA	Gm23550	ENSMUST00000179003	miRNA		7	-1	103267235	121
ENSMUSG00000094971	miRNA	Gm25255	ENSMUST00000179579	miRNA		8	1	15418536	110
ENSMUSG00000076147	miRNA	Mir694	ENSMUST00000102193	miRNA		18	-1	66219333	70
ENSMUSG00000065420	miRNA	Mir142b	ENSMUST00000083486	miRNA		11	-1	87756955	115
ENSMUSG00000093058	miRNA	Gm24810	ENSMUST00000175317	miRNA		15	-1	62653004	70
ENSMUSG00000087926	snoRNA	Gm23233	ENSMUST00000157301	snoRNA		7	-1	67570703	137
ENSMUSG00000093710	miRNA	Mir5625	ENSMUST00000176598	miRNA		5	1	30647936	80
ENSMUSG00000065534	miRNA	Mir324	ENSMUST00000083600	miRNA		11	1	70012043	89
ENSMUSG00000088951	snRNA	Gm24940	ENSMUST00000158326	snRNA		1	1	163402283	108
ENSMUSG00000084648	snRNA	Gm24378	ENSMUST00000122699	snRNA		14	-1	47270964	106
ENSMUSG00000065587	miRNA	Mir34c	ENSMUST00000083653	miRNA		9	-1	51103110	77
ENSMUSG00000065447	miRNA	Mir302d	ENSMUST00000083513	miRNA		3	1	127545624	66
ENSMUSG00000089256	misc_RNA	Gm25717	ENSMUST00000158631	misc_RNA		1	-1	131102745	353
ENSMUSG00000077055	miRNA	Gm24543	ENSMUST00000103867	miRNA		19	-1	9234978	82
ENSMUSG00000064720	snoRNA	Gm25856	ENSMUST00000082786	snoRNA		12	1	109682994	75
ENSMUSG00000093314	miRNA	Mir5136	ENSMUST00000175573	miRNA		19	-1	8888774	76
ENSMUSG00000064941	snRNA	Gm23238	ENSMUST00000083007	snRNA		19	1	18732741	164
ENSMUSG00000065095	snoRNA	Gm23679	ENSMUST00000083161	snoRNA		X	1	137150815	119
ENSMUSG00000095825	snRNA	Gm25448	ENSMUST00000180065	snRNA		13	1	62791507	107
ENSMUSG00000065580	miRNA	Mir15b	ENSMUST00000083646	miRNA		3	1	69009772	64
ENSMUSG00000080412	miRNA	Gm26474	ENSMUST00000116762	miRNA		5	1	120287726	122
ENSMUSG00000096240	protein_coding	Gm21830	ENSMUST00000178898	protein_coding	principal1	2	1	67413725	135
ENSMUSG00000079374	protein_coding	Gm8334	ENSMUST00000112755	protein_coding	principal1	X	-1	148615153	1662
ENSMUSG00000098785	miRNA	Mir6395	ENSMUST00000183885	miRNA		8	-1	34166712	91
ENSMUSG00000089318	misc_RNA	Gm23179	ENSMUST00000158693	misc_RNA		2	1	142381988	304
ENSMUSG00000104926	miRNA	Mir6947	ENSMUST00000198991	miRNA		14	1	29988888	65
ENSMUSG00000077599	snoRNA	Gm26012	ENSMUST00000104411	snoRNA		18	1	81981069	128
ENSMUSG00000096814	snoRNA	Gm25085	ENSMUST00000180298	snoRNA		7	-1	59540948	79
ENSMUSG00000094400	snRNA	Gm23140	ENSMUST00000082487	snRNA		19	1	47058162	107
ENSMUSG00000065742	snRNA	Gm25007	ENSMUST00000083808	snRNA		15	1	48551308	133
ENSMUSG00000093388	miRNA	Gm22655	ENSMUST00000174949	miRNA		7	1	101881184	96
ENSMUSG00000088536	snoRNA	Gm23278	ENSMUST00000157911	snoRNA		14	1	87346245	143
ENSMUSG00000064554	rRNA	n-R5s173	ENSMUST00000082620	rRNA		5	1	107401319	119
ENSMUSG00000073554	pseudogene	Gm6960	ENSMUST00000051629	pseudogene		18	1	60426292	639
ENSMUSG00000088684	snoRNA	Gm23994	ENSMUST00000158059	snoRNA		16	-1	87761643	88
ENSMUSG00000070076	miRNA	Mir127	ENSMUST00000093568	miRNA		12	1	109592846	70
ENSMUSG00000095732	snoRNA	Gm25311	ENSMUST00000104136	snoRNA		6	-1	124304428	132
ENSMUSG00000093959	miRNA	Gm24496	ENSMUST00000178287	miRNA		9	-1	10290587	110
ENSMUSG00000099078	miRNA	Mir8110	ENSMUST00000183771	miRNA		8	1	89024735	97
ENSMUSG00000088529	scaRNA	Gm26083	ENSMUST00000157904	scaRNA		11	1	117077243	193
ENSMUSG00000094474	protein_coding	AC123873.2	ENSMUST00000177582	protein_coding		JH584299.1	1	173050	1446
ENSMUSG00000090853	protein_coding	Gm17364	ENSMUST00000163881	protein_coding	principal1	13	-1	41273977	72
ENSMUSG00000095428	snoRNA	Gm24418	ENSMUST00000177597	snoRNA		7	-1	59438097	79
ENSMUSG00000073682	protein_coding	Gm10563	ENSMUST00000115821	protein_coding	principal1	4	-1	155645408	237
ENSMUSG00000093958	snoRNA	Gm24495	ENSMUST00000178575	snoRNA		7	-1	59507276	79
ENSMUSG00000065068	rRNA	n-R5s5	ENSMUST00000083134	rRNA		X	-1	18323562	119
ENSMUSG00000088544	miRNA	Mir1945	ENSMUST00000157919	miRNA		16	-1	11254445	78
ENSMUSG00000065505	miRNA	Mir148a	ENSMUST00000083571	miRNA		6	-1	51269910	99
ENSMUSG00000077593	snoRNA	Gm26014	ENSMUST00000104405	snoRNA		18	1	77682614	132
ENSMUSG00000074877	pseudogene	Gm10780	ENSMUST00000099459	pseudogene		3	1	70689092	285
ENSMUSG00000089186	misc_RNA	Gm22948	ENSMUST00000158561	misc_RNA		10	-1	40875882	243
ENSMUSG00000076005	miRNA	Mir547	ENSMUST00000102051	miRNA		X	-1	67988451	78
ENSMUSG00000077844	miRNA	Gm22231	ENSMUST00000101027	miRNA		16	1	33068110	73
ENSMUSG00000091419	pseudogene	Gm17450	ENSMUST00000164671	pseudogene		13	1	91220452	426
ENSMUSG00000093230	miRNA	Gm24109	ENSMUST00000175489	miRNA		3	1	87617399	103
ENSMUSG00000098670	misc_RNA	Gm27818	ENSMUST00000184536	misc_RNA		19	1	34294137	159
ENSMUSG00000088469	snoRNA	Gm24751	ENSMUST00000157844	snoRNA		15	1	41948997	102
ENSMUSG00000095000	miRNA	Gm25171	ENSMUST00000116926	miRNA		7	-1	103261003	121
ENSMUSG00000065344	snRNA	Gm25581	ENSMUST00000083410	snRNA		4	-1	39259794	164
ENSMUSG00000088093	ribozyme	Gm22811	ENSMUST00000157468	ribozyme		10	-1	28954302	154
ENSMUSG00000088600	rRNA	Gm24189	ENSMUST00000157975	rRNA		10	-1	30673227	94
ENSMUSG00000089550	snoRNA	Gm24179	ENSMUST00000158925	snoRNA		10	-1	126840501	127
ENSMUSG00000077332	snoRNA	Gm23014	ENSMUST00000104144	snoRNA		6	-1	83837066	130
ENSMUSG00000065719	rRNA	n-R5s12	ENSMUST00000083785	rRNA		X	1	136277505	119
ENSMUSG00000095280	protein_coding	Gm21738	ENSMUST00000177817	protein_coding	principal1	14	-1	19418930	681
ENSMUSG00000098716	miRNA	Gm28033	ENSMUST00000184224	miRNA		17	-1	35868397	96
ENSMUSG00000094402	snoRNA	Gm23139	ENSMUST00000179454	snoRNA		15	-1	6151348	132
ENSMUSG00000065327	misc_RNA	Gm22058	ENSMUST00000083393	misc_RNA		12	1	69930904	310
ENSMUSG00000096567	miRNA	Gm24098	ENSMUST00000102075	miRNA		15	1	38238572	109
ENSMUSG00000099004	miRNA	Gm27656	ENSMUST00000185055	miRNA		13	1	91752106	80
ENSMUSG00000092047	protein_coding	Gm17631	ENSMUST00000171980	protein_coding	principal1	6	1	129862649	69
ENSMUSG00000105182	miRNA	Mir669a-9	ENSMUST00000200087	miRNA		2	1	10494028	87
ENSMUSG00000099035	miRNA	Mir7040	ENSMUST00000184661	miRNA		6	1	83049711	63
ENSMUSG00000077821	miRNA	Gm27450	ENSMUST00000104632	miRNA		9	1	72033198	90
ENSMUSG00000065086	snoRNA	Gm26495	ENSMUST00000083152	snoRNA		10	1	116340583	137
ENSMUSG00000077090	miRNA	Gm22117	ENSMUST00000103902	miRNA		10	-1	60211251	67
ENSMUSG00000096092	rRNA	n-R5s125	ENSMUST00000179377	rRNA		8	-1	123581273	119
ENSMUSG00000077673	snoRNA	Gm24471	ENSMUST00000104485	snoRNA		13	-1	99692529	131
ENSMUSG00000096776	protein_coding	Vmn1r186	ENSMUST00000177783	protein_coding		GL456219.1	-1	95088	903
ENSMUSG00000088505	scaRNA	Gm26489	ENSMUST00000157880	scaRNA		2	-1	171306431	264
ENSMUSG00000098996	miRNA	Mir7676-1	ENSMUST00000183491	miRNA		15	-1	78284849	62
ENSMUSG00000089391	misc_RNA	Gm23020	ENSMUST00000158766	misc_RNA		7	1	73662048	253
ENSMUSG00000077437	rRNA	n-R5s178	ENSMUST00000104249	rRNA		5	1	134416239	114
ENSMUSG00000089424	miRNA	Mir1930	ENSMUST00000158799	miRNA		10	1	77641224	84
ENSMUSG00000077886	miRNA	Mir295	ENSMUST00000104694	miRNA		7	1	3220773	69
ENSMUSG00000080684	miRNA	Gm23988	ENSMUST00000117034	miRNA		2	1	10501633	122
ENSMUSG00000065549	miRNA	Mir200b	ENSMUST00000083615	miRNA		4	-1	156055750	70
ENSMUSG00000095045	snoRNA	Gm22851	ENSMUST00000178741	snoRNA		7	-1	59774283	94
ENSMUSG00000090625	protein_coding	Gm20721	ENSMUST00000168292	protein_coding	principal1	2	-1	174346712	1484
ENSMUSG00000088057	snRNA	Gm26149	ENSMUST00000157432	snRNA		7	1	81669728	108
ENSMUSG00000088221	snRNA	Gm22602	ENSMUST00000157596	snRNA		10	1	90450910	95
ENSMUSG00000088025	ribozyme	Rprl3	ENSMUST00000157400	ribozyme		8	-1	3803358	290
ENSMUSG00000075918	rRNA	n-R5s2	ENSMUST00000101968	rRNA		X	1	6106891	119
ENSMUSG00000105488	miRNA	Gm44396	ENSMUST00000199843	miRNA		12	1	35308891	114
ENSMUSG00000078031	miRNA	Mir466d	ENSMUST00000104837	miRNA		2	1	10511967	96
ENSMUSG00000066378	protein_coding	Gm10160	ENSMUST00000085094	protein_coding	principal1	7	-1	81855794	201
ENSMUSG00000099218	miRNA	Mir5124b	ENSMUST00000184251	miRNA		14	1	11282477	85
ENSMUSG00000064517	snRNA	Gm22454	ENSMUST00000082583	snRNA		9	1	107096951	107
ENSMUSG00000064491	snRNA	Gm22061	ENSMUST00000082557	snRNA		11	1	98946444	107
ENSMUSG00000105329	miRNA	Mir7215	ENSMUST00000200383	miRNA		10	1	62682508	51
ENSMUSG00000076028	miRNA	Mir669a-3	ENSMUST00000102074	miRNA		2	1	10474433	109
ENSMUSG00000098926	miRNA	Mir6904	ENSMUST00000183443	miRNA		1	1	180587201	67
ENSMUSG00000096133	miRNA	Gm25145	ENSMUST00000177640	miRNA		3	-1	92061506	110
ENSMUSG00000093843	snRNA	Gm25939	ENSMUST00000179876	snRNA		1	1	72255008	191
ENSMUSG00000084421	snoRNA	Gm25107	ENSMUST00000122472	snoRNA		X	-1	147484421	129
ENSMUSG00000093860	snoRNA	Gm22632	ENSMUST00000178266	snoRNA		7	-1	59481297	79
ENSMUSG00000068068	protein_coding	Gm7735	ENSMUST00000089098	protein_coding	principal1	16	1	89169490	159
ENSMUSG00000096930	protein_coding	Gm26657	ENSMUST00000181745	protein_coding	principal1	4	1	56740070	1308
ENSMUSG00000092157	protein_coding	Gm17268	ENSMUST00000171515	protein_coding	principal1	11	-1	82038562	66
ENSMUSG00000076275	miRNA	Mir675	ENSMUST00000102320	miRNA		7	-1	142577147	84
ENSMUSG00000077314	snoRNA	Gm24171	ENSMUST00000104126	snoRNA		1	-1	20915540	131
ENSMUSG00000089563	snRNA	Gm24667	ENSMUST00000158938	snRNA		16	1	10237918	103
ENSMUSG00000099066	miRNA	Mir6978	ENSMUST00000184453	miRNA		17	-1	57217228	57
ENSMUSG00000092871	miRNA	Gm22646	ENSMUST00000175130	miRNA		19	1	43622446	115
ENSMUSG00000070192	rRNA	n-R5s58	ENSMUST00000093682	rRNA		12	-1	53046826	119
ENSMUSG00000088692	snRNA	Gm23838	ENSMUST00000158067	snRNA		5	-1	6015024	162
ENSMUSG00000064682	snRNA	Gm25813	ENSMUST00000082748	snRNA		8	-1	52337105	191
ENSMUSG00000065926	snRNA	Gm22798	ENSMUST00000083992	snRNA		3	-1	52722755	107
ENSMUSG00000093227	miRNA	Mir1251	ENSMUST00000175486	miRNA		10	-1	92137223	84
ENSMUSG00000094054	processed_pseudogene	AC133103.2	ENSMUST00000179487	processed_pseudogene		GL456211.1	1	113868	891
ENSMUSG00000096968	protein_coding	Gm26620	ENSMUST00000180542	protein_coding	principal1	1	1	170885065	817
ENSMUSG00000098899	miRNA	Gm27839	ENSMUST00000184242	miRNA		X	-1	24617318	106
ENSMUSG00000089293	snRNA	Gm23210	ENSMUST00000158668	snRNA		16	1	92042677	98
ENSMUSG00000084647	snRNA	Gm24382	ENSMUST00000122698	snRNA		3	-1	60127747	107
ENSMUSG00000087945	rRNA	Gm24250	ENSMUST00000157320	rRNA		3	1	25546020	135
ENSMUSG00000015126	protein_coding	Tsr3	ENSMUST00000063574	protein_coding	principal1	17	1	25240170	1192
ENSMUSG00000106233	miRNA	Mir509	ENSMUST00000196089	miRNA		X	-1	68010179	75
ENSMUSG00000080597	miRNA	Gm22033	ENSMUST00000116947	miRNA		4	-1	132218528	90
ENSMUSG00000076332	miRNA	Gm24715	ENSMUST00000102377	miRNA		7	-1	18417933	95
ENSMUSG00000065281	snoRNA	Gm24452	ENSMUST00000083347	snoRNA		19	1	8724531	72
ENSMUSG00000094178	rRNA	n-R5s118	ENSMUST00000179887	rRNA		8	-1	123569446	119
ENSMUSG00000080556	miRNA	Mir467g	ENSMUST00000116906	miRNA		5	-1	34732972	120
ENSMUSG00000065460	miRNA	Mir133a-2	ENSMUST00000083526	miRNA		2	1	180398379	104
ENSMUSG00000091347	protein_coding	Gm10772	ENSMUST00000167981	protein_coding	principal1	13	-1	66227573	255
ENSMUSG00000077921	miRNA	Mir872	ENSMUST00000104728	miRNA		4	1	94665157	81
ENSMUSG00000092952	miRNA	Mir3059	ENSMUST00000175211	miRNA		10	1	101772692	81
ENSMUSG00000096506	protein_coding	CR974586.4	ENSMUST00000115904	protein_coding		JH584293.1	1	103128	312
ENSMUSG00000093072	miRNA	Gm25950	ENSMUST00000175331	miRNA		13	1	114580495	100
ENSMUSG00000077275	snoRNA	Gm22785	ENSMUST00000104087	snoRNA		X	1	70693476	132
ENSMUSG00000099224	miRNA	Gm27379	ENSMUST00000183730	miRNA		12	1	109728821	123
ENSMUSG00000093240	rRNA	Gm24573	ENSMUST00000175499	rRNA		4	-1	48762962	112
ENSMUSG00000084637	rRNA	n-R5s14	ENSMUST00000122688	rRNA		X	1	151985310	107
ENSMUSG00000065721	misc_RNA	Gm26168	ENSMUST00000083787	misc_RNA		6	1	122623547	112
ENSMUSG00000065269	snoRNA	Gm23456	ENSMUST00000083335	snoRNA		6	-1	148642660	137
ENSMUSG00000095470	protein_coding	Gm21863	ENSMUST00000179133	protein_coding	principal1	12	1	19954505	336
ENSMUSG00000084751	miRNA	Mir1894	ENSMUST00000122802	miRNA		17	1	35917889	81
ENSMUSG00000089531	snoRNA	Gm25162	ENSMUST00000158906	snoRNA		14	1	62668612	159
ENSMUSG00000094095	snoRNA	Gm25648	ENSMUST00000177844	snoRNA		7	-1	59347759	79
ENSMUSG00000088763	snRNA	Gm24391	ENSMUST00000158138	snRNA		6	1	120524897	102
ENSMUSG00000099225	miRNA	Mir8104	ENSMUST00000185165	miRNA		10	1	122679315	101
ENSMUSG00000076036	miRNA	Gm22133	ENSMUST00000102082	miRNA		7	-1	45458197	109
ENSMUSG00000088234	snRNA	Gm25423	ENSMUST00000157609	snRNA		7	-1	116691485	107
ENSMUSG00000067331	pseudogene	Gm10205	ENSMUST00000087431	pseudogene		5	-1	44984242	234
ENSMUSG00000098742	miRNA	Gm27476	ENSMUST00000183366	miRNA		19	1	34750510	104
ENSMUSG00000096463	protein_coding	Gm21750	ENSMUST00000098874	protein_coding	principal1	14	1	73661225	1497
ENSMUSG00000089585	snoRNA	Gm23338	ENSMUST00000158960	snoRNA		4	-1	40459033	95
ENSMUSG00000088395	misc_RNA	Gm26313	ENSMUST00000157770	misc_RNA		4	1	143340399	308
ENSMUSG00000076500	IG_LV_gene	Gm20730	ENSMUST00000103301	IG_LV_gene	principal1	6	-1	43082097	359
ENSMUSG00000096845	snoRNA	Gm25597	ENSMUST00000179388	snoRNA		7	-1	59794453	94
ENSMUSG00000088622	snRNA	Gm23316	ENSMUST00000157997	snRNA		9	1	20477865	114
ENSMUSG00000077892	miRNA	Gm22901	ENSMUST00000104700	miRNA		3	-1	146399217	84
ENSMUSG00000064877	snoRNA	Gm23377	ENSMUST00000082943	snoRNA		9	-1	110121805	126
ENSMUSG00000080366	miRNA	Gm25775	ENSMUST00000116716	miRNA		8	-1	3099506	121
ENSMUSG00000098993	miRNA	Gm27731	ENSMUST00000185192	miRNA		10	1	45537244	107
ENSMUSG00000099062	miRNA	Mir7077	ENSMUST00000183991	miRNA		8	1	117453023	57
ENSMUSG00000069890	pseudogene	1700024J04Rik	ENSMUST00000093146	pseudogene		11	-1	49588462	1821
ENSMUSG00000064399	snRNA	Gm23629	ENSMUST00000082465	snRNA		14	1	63099536	107
ENSMUSG00000087979	snRNA	Gm23715	ENSMUST00000157354	snRNA		16	1	23046959	106
ENSMUSG00000105145	miRNA	Gm47299	ENSMUST00000196643	miRNA		12	-1	69361258	80
ENSMUSG00000088311	snoRNA	Gm26184	ENSMUST00000157686	snoRNA		8	-1	14273311	131
ENSMUSG00000098860	miRNA	Gm27704	ENSMUST00000185094	miRNA		13	1	61336455	107
ENSMUSG00000094728	protein_coding	AC132444.2	ENSMUST00000180119	protein_coding		GL456221.1	1	58743	372
ENSMUSG00000084418	snoRNA	Gm22276	ENSMUST00000122469	snoRNA		6	1	7879563	129
ENSMUSG00000093148	miRNA	Gm23375	ENSMUST00000175407	miRNA		6	-1	133761770	83
ENSMUSG00000088756	snoRNA	Gm24903	ENSMUST00000158131	snoRNA		15	1	44345650	126
ENSMUSG00000084610	snRNA	Gm25052	ENSMUST00000122661	snRNA		8	1	72037642	158
ENSMUSG00000098918	miRNA	Mir6481	ENSMUST00000184617	miRNA		3	-1	99199453	110
ENSMUSG00000065709	snoRNA	Gm22341	ENSMUST00000083775	snoRNA		3	-1	99113283	129
ENSMUSG00000045506	protein_coding	A930002H24Rik	ENSMUST00000050753	protein_coding	principal1	17	-1	63863791	492
ENSMUSG00000096779	miRNA	Gm22112	ENSMUST00000117032	miRNA		1	-1	82396817	121
ENSMUSG00000088602	snRNA	Gm24191	ENSMUST00000157977	snRNA		5	1	106669999	122
ENSMUSG00000065934	snRNA	Gm25630	ENSMUST00000084000	snRNA		9	1	35474885	162
ENSMUSG00000077158	snoRNA	Gm24578	ENSMUST00000103970	snoRNA		14	-1	12333904	129
ENSMUSG00000094304	miRNA	Gm24923	ENSMUST00000178201	miRNA		7	-1	62078805	88
ENSMUSG00000094489	snRNA	Gm23269	ENSMUST00000178701	snRNA		3	-1	89201273	107
ENSMUSG00000065235	snRNA	Gm22974	ENSMUST00000083301	snRNA		5	1	80893654	103
ENSMUSG00000065642	snoRNA	Snora69	ENSMUST00000083708	snoRNA		X	-1	37083042	131
ENSMUSG00000065087	snoRNA	Snord22	ENSMUST00000083153	snoRNA		19	1	8725866	126
ENSMUSG00000087720	snRNA	Gm26279	ENSMUST00000157095	snRNA		3	-1	94920423	102
ENSMUSG00000065037	misc_RNA	Rn7sk	ENSMUST00000083103	misc_RNA		9	-1	78175633	331
ENSMUSG00000064410	snoRNA	Gm22247	ENSMUST00000082476	snoRNA		4	1	46495155	131
ENSMUSG00000088166	rRNA	Gm23536	ENSMUST00000157541	rRNA		18	-1	69174120	134
ENSMUSG00000088637	misc_RNA	Gm22316	ENSMUST00000158012	misc_RNA		2	1	156386107	216
ENSMUSG00000089204	miRNA	Mir1927	ENSMUST00000158579	miRNA		1	-1	160295972	109
ENSMUSG00000064725	snoRNA	Snord96a	ENSMUST00000082791	snoRNA		11	1	48802032	81
ENSMUSG00000089106	snRNA	Gm23116	ENSMUST00000158481	snRNA		16	1	14382807	67
ENSMUSG00000105783	miRNA	Mir669a-12	ENSMUST00000197274	miRNA		2	1	10503791	87
ENSMUSG00000098812	miRNA	Mir7578	ENSMUST00000183455	miRNA		2	-1	27450630	82
ENSMUSG00000106278	miRNA	Mir3970	ENSMUST00000199287	miRNA		19	1	33157112	90
ENSMUSG00000088176	misc_RNA	Gm23094	ENSMUST00000157551	misc_RNA		8	1	25678950	322
ENSMUSG00000064992	snRNA	Gm22421	ENSMUST00000083058	snRNA		3	-1	132082392	107
ENSMUSG00000098992	miRNA	Gm27597	ENSMUST00000184365	miRNA		11	1	98029413	80
ENSMUSG00000084684	misc_RNA	Gm22026	ENSMUST00000122735	misc_RNA		3	-1	14029762	281
ENSMUSG00000077777	snoRNA	Gm22372	ENSMUST00000104589	snoRNA		7	1	106426712	136
ENSMUSG00000096496	snoRNA	Gm25646	ENSMUST00000178527	snoRNA		7	-1	59379529	79
ENSMUSG00000070170	snoRNA	Gm24163	ENSMUST00000093660	snoRNA		13	1	75905147	132
ENSMUSG00000094508	snoRNA	Gm26230	ENSMUST00000180141	snoRNA		7	-1	59368314	79
ENSMUSG00000094538	snoRNA	Gm25741	ENSMUST00000179825	snoRNA		7	-1	59466370	79
ENSMUSG00000065261	snRNA	Gm23452	ENSMUST00000083327	snRNA		2	-1	80984189	107
ENSMUSG00000077104	miRNA	Gm25263	ENSMUST00000103916	miRNA		2	1	10509885	100
ENSMUSG00000065407	miRNA	Mir135a-1	ENSMUST00000083473	miRNA		9	1	106154124	90
ENSMUSG00000065541	miRNA	Mir24-2	ENSMUST00000083607	miRNA		8	1	84208815	107
ENSMUSG00000064901	snoRNA	Snora21	ENSMUST00000082967	snoRNA		11	-1	97781775	137
ENSMUSG00000076389	miRNA	Gm23192	ENSMUST00000102434	miRNA		7	-1	86298760	96
ENSMUSG00000095729	snRNA	Gm23649	ENSMUST00000179007	snRNA		17	1	72987798	107
ENSMUSG00000098346	miRNA	Mir6986	ENSMUST00000184483	miRNA		19	-1	4623955	58
ENSMUSG00000094650	miRNA	Gm25361	ENSMUST00000179358	miRNA		10	1	128402758	76
ENSMUSG00000095712	snRNA	Gm26465	ENSMUST00000178517	snRNA		3	-1	88970729	107
ENSMUSG00000088494	snRNA	Gm24399	ENSMUST00000157869	snRNA		5	1	65660806	74
ENSMUSG00000065875	snRNA	Gm25684	ENSMUST00000083941	snRNA		7	-1	95442457	107
ENSMUSG00000077269	snoRNA	Gm24434	ENSMUST00000104081	snoRNA		12	1	39621415	132
ENSMUSG00000105120	scaRNA	Gm26413	ENSMUST00000198972	scaRNA		11	-1	116164036	127
ENSMUSG00000065906	snRNA	Gm26107	ENSMUST00000083972	snRNA		3	1	137067892	107
ENSMUSG00000065557	miRNA	Mirlet7c-1	ENSMUST00000083623	miRNA		16	1	77599657	94
ENSMUSG00000035521	protein_coding	Gnptg	ENSMUST00000038973	protein_coding	principal2	17	-1	25240116	1234
ENSMUSG00000087961	misc_RNA	Gm25393	ENSMUST00000157336	misc_RNA		X	-1	137815440	285
ENSMUSG00000089548	snoRNA	Gm25830	ENSMUST00000158923	snoRNA		8	-1	48958481	132
ENSMUSG00000105167	miRNA	Snord43	ENSMUST00000199549	miRNA		15	-1	80082954	108
ENSMUSG00000099163	miRNA	Mir7660	ENSMUST00000183825	miRNA		6	1	115775657	63
ENSMUSG00000088478	miRNA	Mir1946b	ENSMUST00000157853	miRNA		9	-1	21613576	133
ENSMUSG00000084562	rRNA	n-R5s39	ENSMUST00000122613	rRNA		15	-1	39146487	108
ENSMUSG00000087924	snRNA	Gm23231	ENSMUST00000157299	snRNA		6	1	38118383	104
ENSMUSG00000095645	rRNA	n-R5s143	ENSMUST00000179542	rRNA		8	-1	123611833	119
ENSMUSG00000065537	miRNA	Mir132	ENSMUST00000083603	miRNA		11	1	75173682	66
ENSMUSG00000089352	snRNA	Gm25489	ENSMUST00000158727	snRNA		2	1	55003985	141
ENSMUSG00000094528	miRNA	Gm22914	ENSMUST00000175195	miRNA		6	1	51621632	77
ENSMUSG00000098807	miRNA	Mir300	ENSMUST00000083485	miRNA		12	1	109724313	79
ENSMUSG00000104740	miRNA	Mir6516	ENSMUST00000196236	miRNA		11	1	117077348	110
ENSMUSG00000065573	miRNA	Mir350	ENSMUST00000083639	miRNA		1	-1	176772423	99
ENSMUSG00000064580	snRNA	Gm25134	ENSMUST00000082646	snRNA		7	1	19242130	160
ENSMUSG00000098293	miRNA	Mir6991	ENSMUST00000183837	miRNA		19	1	7422573	70
ENSMUSG00000096880	miRNA	Gm23569	ENSMUST00000180120	miRNA		2	1	10492620	120
ENSMUSG00000064968	snoRNA	Snord47	ENSMUST00000083034	snoRNA		1	1	161038082	77
ENSMUSG00000088302	misc_RNA	Zakit	ENSMUST00000157677	misc_RNA		2	1	72327687	308
ENSMUSG00000089119	snoRNA	Gm25901	ENSMUST00000158494	snoRNA		14	-1	109883183	130
ENSMUSG00000098617	misc_RNA	Gm27300	ENSMUST00000184085	misc_RNA		12	1	109544339	97
ENSMUSG00000065050	snRNA	Gm25704	ENSMUST00000083116	snRNA		2	1	133008487	168
ENSMUSG00000089182	snRNA	Gm22945	ENSMUST00000158557	snRNA		10	-1	104471207	157
ENSMUSG00000098951	miRNA	Mir7647	ENSMUST00000183364	miRNA		5	-1	123522695	59
ENSMUSG00000088769	misc_RNA	Gm22637	ENSMUST00000158144	misc_RNA		14	-1	45461645	283
ENSMUSG00000099318	misc_RNA	Gm27735	ENSMUST00000185085	misc_RNA		17	-1	36964432	76
ENSMUSG00000092931	miRNA	Gm22904	ENSMUST00000175190	miRNA		12	1	33062441	160
ENSMUSG00000098516	miRNA	Mir7651	ENSMUST00000184154	miRNA		11	1	6401630	64
ENSMUSG00000077309	rRNA	n-R5s8	ENSMUST00000104121	rRNA		X	1	71131237	118
ENSMUSG00000077594	snoRNA	Gm26018	ENSMUST00000104406	snoRNA		13	1	70168832	128
ENSMUSG00000065674	snRNA	Gm24259	ENSMUST00000083740	snRNA		9	-1	108738858	107
ENSMUSG00000064930	snoRNA	Gm23723	ENSMUST00000082996	snoRNA		3	1	90126535	132
ENSMUSG00000099192	misc_RNA	Gm27373	ENSMUST00000184017	misc_RNA		9	1	21677913	184
ENSMUSG00000035521	protein_coding	Gnptg	ENSMUST00000115154	protein_coding	alternative2	17	-1	25240124	2249
ENSMUSG00000064574	snRNA	Gm25797	ENSMUST00000082640	snRNA		X	-1	109023462	107
ENSMUSG00000088902	misc_RNA	Gm25435	ENSMUST00000158277	misc_RNA		4	1	116915227	267
ENSMUSG00000088293	snRNA	Gm26411	ENSMUST00000157668	snRNA		5	-1	118148894	107
ENSMUSG00000084567	misc_RNA	Gm26476	ENSMUST00000122618	misc_RNA		11	1	67364090	313
ENSMUSG00000088928	snRNA	Gm25898	ENSMUST00000158303	snRNA		2	-1	53274841	106
ENSMUSG00000064977	snRNA	Gm26056	ENSMUST00000083043	snRNA		7	1	14778669	104
ENSMUSG00000096635	miRNA	Gm22174	ENSMUST00000175050	miRNA		2	1	163092899	125
ENSMUSG00000092906	miRNA	Gm25736	ENSMUST00000175165	miRNA		1	1	51015313	101
ENSMUSG00000105998	miRNA	Gm44324	ENSMUST00000198517	miRNA		12	1	102987829	135
ENSMUSG00000064585	snoRNA	Gm25129	ENSMUST00000082651	snoRNA		2	1	158379534	133
ENSMUSG00000099180	miRNA	Mir6956	ENSMUST00000183598	miRNA		15	1	79002223	62
ENSMUSG00000104857	scaRNA	Gm26413	ENSMUST00000196783	scaRNA		11	-1	116164035	126
ENSMUSG00000064597	snoRNA	Gm22299	ENSMUST00000082663	snoRNA		15	-1	58041651	136
ENSMUSG00000088606	miRNA	Mir1951	ENSMUST00000157981	miRNA		2	1	115638725	89
ENSMUSG00000065870	snoRNA	Rnu3a	ENSMUST00000083936	snoRNA		10	1	40258467	214
ENSMUSG00000093218	miRNA	Gm25252	ENSMUST00000175477	miRNA		12	-1	109723875	120
ENSMUSG00000094403	miRNA	Mir692-2	ENSMUST00000102081	miRNA		4	1	125504749	109
ENSMUSG00000064811	snoRNA	Gm22358	ENSMUST00000082877	snoRNA		13	-1	24811568	122
ENSMUSG00000070235	misc_RNA	Gm26329	ENSMUST00000093723	misc_RNA		15	1	78369248	110
ENSMUSG00000077223	snoRNA	Gm22271	ENSMUST00000104035	snoRNA		19	-1	56277645	128
ENSMUSG00000096383	miRNA	Gm25353	ENSMUST00000179366	miRNA		14	-1	45404960	121
ENSMUSG00000075908	snRNA	Gm23940	ENSMUST00000101958	snRNA		19	1	3490309	105
ENSMUSG00000098762	miRNA	Mir7045	ENSMUST00000183346	miRNA		6	1	125097024	63
ENSMUSG00000096114	snoRNA	Gm26272	ENSMUST00000179241	snoRNA		9	-1	42317681	132
ENSMUSG00000091096	protein_coding	Gm17304	ENSMUST00000167618	protein_coding	principal1	5	1	106609098	69
ENSMUSG00000094123	miRNA	Gm23945	ENSMUST00000179609	miRNA		X	-1	71531376	92
ENSMUSG00000088768	snRNA	Gm25494	ENSMUST00000158143	snRNA		10	1	128944905	100
ENSMUSG00000093137	snRNA	Gm25995	ENSMUST00000175396	snRNA		9	1	63442319	142
ENSMUSG00000065873	rRNA	n-R5s183	ENSMUST00000083939	rRNA		4	1	41303158	115
ENSMUSG00000084743	misc_RNA	Gm25295	ENSMUST00000122794	misc_RNA		9	1	18574613	306
ENSMUSG00000064972	snRNA	Gm26055	ENSMUST00000083038	snRNA		12	-1	95378951	107
ENSMUSG00000096560	miRNA	Gm24096	ENSMUST00000103905	miRNA		6	-1	70148045	110
ENSMUSG00000084660	rRNA	n-R5s61	ENSMUST00000122711	rRNA		12	1	68600970	118
ENSMUSG00000088845	snRNA	Gm26355	ENSMUST00000158220	snRNA		4	1	116904637	105
ENSMUSG00000092847	miRNA	Mir344d-1	ENSMUST00000175106	miRNA		7	-1	61683192	69
ENSMUSG00000094465	snoRNA	Gm24306	ENSMUST00000180229	snoRNA		7	-1	59349614	79
ENSMUSG00000092821	miRNA	Gm23163	ENSMUST00000175080	miRNA		8	-1	109425744	101
ENSMUSG00000099144	miRNA	Gm27486	ENSMUST00000184923	miRNA		5	-1	124425589	80
ENSMUSG00000065408	miRNA	Mir31	ENSMUST00000083474	miRNA		4	-1	88910662	106
ENSMUSG00000098697	misc_RNA	Gm27315	ENSMUST00000183977	misc_RNA		1	1	73392246	154
ENSMUSG00000065812	snoRNA	Gm24696	ENSMUST00000083878	snoRNA		15	-1	61358004	134
ENSMUSG00000095798	miRNA	Gm26298	ENSMUST00000116956	miRNA		9	-1	108653728	121
ENSMUSG00000075968	snoRNA	Gm25089	ENSMUST00000102015	snoRNA		7	-1	59555932	79
ENSMUSG00000077259	snoRNA	Gm23979	ENSMUST00000104071	snoRNA		12	-1	9643817	128
ENSMUSG00000064648	snRNA	Gm23303	ENSMUST00000082714	snRNA		4	-1	148443485	152
ENSMUSG00000077769	snoRNA	Gm25215	ENSMUST00000104581	snoRNA		2	-1	49398515	121
ENSMUSG00000104702	miRNA	Gm44298	ENSMUST00000198934	miRNA		X	-1	29977661	86
ENSMUSG00000088682	rRNA	Gm23999	ENSMUST00000158057	rRNA		14	-1	29009799	104
ENSMUSG00000064887	snRNA	Gm24205	ENSMUST00000082953	snRNA		8	-1	66002452	107
ENSMUSG00000078677	protein_coding	Gm10974	ENSMUST00000107486	protein_coding	principal1	7	1	66365905	126
ENSMUSG00000064732	snRNA	Gm23447	ENSMUST00000082798	snRNA		17	1	60486007	163
ENSMUSG00000104979	miRNA	Mir6994	ENSMUST00000198985	miRNA		19	1	11923728	73
ENSMUSG00000088119	snRNA	Gm24060	ENSMUST00000157494	snRNA		11	-1	118181035	95
ENSMUSG00000064952	snoRNA	Gm24920	ENSMUST00000083018	snoRNA		3	-1	95090709	85
ENSMUSG00000095142	snRNA	Gm24389	ENSMUST00000179962	snRNA		17	-1	34687802	107
ENSMUSG00000088707	rRNA	Gm25551	ENSMUST00000158082	rRNA		5	-1	37092360	103
ENSMUSG00000089263	miRNA	Gm22892	ENSMUST00000158638	miRNA		6	1	135740997	105
ENSMUSG00000089376	misc_RNA	Gm22136	ENSMUST00000158751	misc_RNA		3	1	153621702	268
ENSMUSG00000065462	miRNA	Mir200c	ENSMUST00000083528	miRNA		6	-1	124718390	69
ENSMUSG00000093187	miRNA	Mir344-2	ENSMUST00000175446	miRNA		7	-1	61940106	80
ENSMUSG00000105413	miRNA	Gm47310	ENSMUST00000196118	miRNA		11	-1	104251148	71
ENSMUSG00000088524	snoRNA	Snord2	ENSMUST00000157899	snoRNA		16	1	23108953	69
ENSMUSG00000098831	miRNA	Mir7119	ENSMUST00000185054	miRNA		4	1	126559860	59
ENSMUSG00000089057	snRNA	Gm23349	ENSMUST00000158432	snRNA		1	-1	184580206	98
ENSMUSG00000065562	miRNA	Mir215	ENSMUST00000083628	miRNA		1	1	185313581	112
ENSMUSG00000065764	snRNA	Gm23850	ENSMUST00000083830	snRNA		3	1	86364457	169
ENSMUSG00000084543	snoRNA	Gm23184	ENSMUST00000122594	snoRNA		8	-1	25610558	131
ENSMUSG00000095379	snRNA	Gm22108	ENSMUST00000177961	snRNA		13	-1	120017213	106
ENSMUSG00000089113	ribozyme	Gm22902	ENSMUST00000158488	ribozyme		2	-1	131413962	302
ENSMUSG00000099153	miRNA	Mir7671	ENSMUST00000184599	miRNA		11	-1	53763654	58
ENSMUSG00000096624	miRNA	Mir467a-1	ENSMUST00000102207	miRNA		2	1	10476346	73
ENSMUSG00000092093	pseudogene	Gm17528	ENSMUST00000171026	pseudogene		13	1	28827123	239
ENSMUSG00000065315	snRNA	Gm26064	ENSMUST00000083381	snRNA		13	-1	43425850	109
ENSMUSG00000089071	snRNA	Gm24499	ENSMUST00000158446	snRNA		12	-1	69152377	104
ENSMUSG00000092939	miRNA	Gm22907	ENSMUST00000175198	miRNA		5	-1	120852296	126
ENSMUSG00000089541	snRNA	Gm25834	ENSMUST00000158916	snRNA		18	-1	61467153	101
ENSMUSG00000092897	miRNA	Gm23812	ENSMUST00000175156	miRNA		8	1	46229794	84
ENSMUSG00000064981	snoRNA	Snora70	ENSMUST00000083047	snoRNA		X	1	74272484	137
ENSMUSG00000077554	snoRNA	Gm23707	ENSMUST00000104366	snoRNA		9	1	88917832	125
ENSMUSG00000099080	miRNA	Mir7071	ENSMUST00000184847	miRNA		8	1	88138206	69
ENSMUSG00000065547	miRNA	Mir199a-1	ENSMUST00000083613	miRNA		9	-1	21496564	70
ENSMUSG00000077204	snoRNA	Gm25610	ENSMUST00000104016	snoRNA		12	1	12013623	129
ENSMUSG00000094654	rRNA	Gm25359	ENSMUST00000179315	rRNA		Y	-1	74910962	108
ENSMUSG00000098417	miRNA	Mir6379	ENSMUST00000183392	miRNA		3	-1	46900782	115
ENSMUSG00000088228	snoRNA	Gm22603	ENSMUST00000157603	snoRNA		11	1	56482949	96
ENSMUSG00000094359	miRNA	Gm25571	ENSMUST00000178322	miRNA		4	-1	139588977	102
ENSMUSG00000092986	misc_RNA	Gm25574	ENSMUST00000175245	misc_RNA		3	-1	38268084	249
ENSMUSG00000088055	snoRNA	Gm26148	ENSMUST00000157430	snoRNA		4	-1	15911634	68
ENSMUSG00000106200	miRNA	Gm44341	ENSMUST00000196168	miRNA		13	1	51202698	138
ENSMUSG00000088048	snRNA	Gm23331	ENSMUST00000157423	snRNA		5	-1	60500940	108
ENSMUSG00000093905	snRNA	Gm25023	ENSMUST00000082977	snRNA		X	1	57989473	107
ENSMUSG00000088009	snoRNA	Gm24774	ENSMUST00000157384	snoRNA		14	1	83405631	134
ENSMUSG00000106323	miRNA	Mir7228	ENSMUST00000196812	miRNA		5	1	134572076	39
ENSMUSG00000105967	miRNA	Gm47298	ENSMUST00000197285	miRNA		X	-1	143827344	122
ENSMUSG00000089348	misc_RNA	Gm22669	ENSMUST00000158723	misc_RNA		7	1	114936545	318
ENSMUSG00000106493	miRNA	Mir9-1	ENSMUST00000199907	miRNA		3	1	88215598	89
ENSMUSG00000088596	snRNA	Gm24602	ENSMUST00000157971	snRNA		8	1	102523894	63
ENSMUSG00000087941	snRNA	Gm27635	ENSMUST00000157316	snRNA		14	-1	56852816	59
ENSMUSG00000084599	rRNA	n-R5s70	ENSMUST00000122650	rRNA		11	1	72281016	116
ENSMUSG00000098600	miRNA	Mir6929	ENSMUST00000185077	miRNA		11	-1	101419253	67
ENSMUSG00000075015	protein_coding	Gm10801	ENSMUST00000099684	protein_coding	principal1	2	1	98662237	504
ENSMUSG00000084439	misc_RNA	Gm23430	ENSMUST00000122490	misc_RNA		16	-1	23423735	314
ENSMUSG00000092655	miRNA	Gm25238	ENSMUST00000174914	miRNA		19	1	60580529	89
ENSMUSG00000089536	scaRNA	Scarna3a	ENSMUST00000158911	scaRNA		1	1	159340283	140
ENSMUSG00000094190	miRNA	Gm25451	ENSMUST00000177832	miRNA		2	1	10480365	121
ENSMUSG00000088050	snRNA	Gm26151	ENSMUST00000157425	snRNA		X	-1	146293835	60
ENSMUSG00000064669	snRNA	Gm24461	ENSMUST00000082735	snRNA		2	1	80558685	103
ENSMUSG00000098666	miRNA	Mir6950	ENSMUST00000184438	miRNA		14	1	69692248	73
ENSMUSG00000077569	snoRNA	Gm24608	ENSMUST00000104381	snoRNA		3	-1	90010730	136
ENSMUSG00000104599	miRNA	Gm49346	ENSMUST00000197708	miRNA		16	1	23110753	106
ENSMUSG00000098366	miRNA	Mir145b	ENSMUST00000184434	miRNA		18	-1	69022273	75
ENSMUSG00000070084	miRNA	Mir486	ENSMUST00000093576	miRNA		8	1	23142555	128
ENSMUSG00000076941	miRNA	Gm22065	ENSMUST00000103753	miRNA		18	1	73624928	110
ENSMUSG00000095431	snRNA	Gm26240	ENSMUST00000101893	snRNA		8	-1	21176872	105
ENSMUSG00000084710	misc_RNA	Gm24628	ENSMUST00000122761	misc_RNA		4	1	54710624	289
ENSMUSG00000098755	misc_RNA	Gm27651	ENSMUST00000183465	misc_RNA		2	1	156860305	246
ENSMUSG00000091989	processed_pseudogene	Ndufab1-ps	ENSMUST00000166096	processed_pseudogene		7	1	80507787	468
ENSMUSG00000105116	miRNA	Gm44494	ENSMUST00000196760	miRNA		3	1	127481120	129
ENSMUSG00000099250	misc_RNA	Rn7s2	ENSMUST00000175032	misc_RNA		12	-1	69361481	300
ENSMUSG00000065729	snRNA	Gm26176	ENSMUST00000083795	snRNA		7	-1	73646089	105
ENSMUSG00000098679	miRNA	Mir7688	ENSMUST00000183565	miRNA		10	1	93433107	56
ENSMUSG00000088981	snRNA	Gm25601	ENSMUST00000158356	snRNA		5	-1	52343222	105
ENSMUSG00000094956	rRNA	n-R5s122	ENSMUST00000179500	rRNA		8	-1	123576194	119
ENSMUSG00000093214	miRNA	Gm25248	ENSMUST00000175473	miRNA		12	1	42281716	98
ENSMUSG00000098937	miRNA	Mir7241	ENSMUST00000184532	miRNA		9	-1	67727780	64
ENSMUSG00000098591	misc_RNA	Gm27631	ENSMUST00000184163	misc_RNA		6	1	83703518	466
ENSMUSG00000076269	miRNA	Mir374b	ENSMUST00000102314	miRNA		X	-1	103573154	95
ENSMUSG00000105557	miRNA	Mir3966	ENSMUST00000198473	miRNA		10	1	97423478	85
ENSMUSG00000080506	miRNA	Gm25042	ENSMUST00000116856	miRNA		3	-1	133431823	121
ENSMUSG00000064884	snRNA	Gm24204	ENSMUST00000082950	snRNA		15	-1	80088553	107
ENSMUSG00000080607	snoRNA	Gm23839	ENSMUST00000116957	snoRNA		10	-1	21878892	109
ENSMUSG00000065636	snRNA	Gm24254	ENSMUST00000083702	snRNA		8	1	92039917	104
ENSMUSG00000095531	snRNA	Gm25284	ENSMUST00000180345	snRNA		5	-1	150547453	141
ENSMUSG00000094312	snRNA	Gm23242	ENSMUST00000083055	snRNA		14	-1	110428263	107
ENSMUSG00000095971	snoRNA	Gm26436	ENSMUST00000180325	snoRNA		4	1	4729573	132
ENSMUSG00000087825	snRNA	Gm22279	ENSMUST00000157200	snRNA		3	1	65525701	93
ENSMUSG00000093102	miRNA	Mir3475	ENSMUST00000175361	miRNA		X	1	140310948	65
ENSMUSG00000064697	snoRNA	Gm24147	ENSMUST00000082763	snoRNA		X	-1	37667376	144
ENSMUSG00000080468	miRNA	Mir1195	ENSMUST00000116818	miRNA		17	-1	70860600	98
ENSMUSG00000099200	miRNA	Mir7019	ENSMUST00000183998	miRNA		4	-1	138316200	69
ENSMUSG00000065233	rRNA	n-R5s60	ENSMUST00000083299	rRNA		12	-1	67489231	119
ENSMUSG00000088352	snoRNA	Gm24013	ENSMUST00000157727	snoRNA		11	1	3788892	99
ENSMUSG00000098364	miRNA	Gm27646	ENSMUST00000183989	miRNA		4	-1	138326089	110
ENSMUSG00000095780	snRNA	Gm24674	ENSMUST00000179194	snRNA		1	-1	10009917	104
ENSMUSG00000084506	snRNA	Gm23792	ENSMUST00000122557	snRNA		1	-1	33981502	93
ENSMUSG00000098413	miRNA	Mir6990	ENSMUST00000183724	miRNA		19	-1	6914286	91
ENSMUSG00000064512	snRNA	Gm22456	ENSMUST00000082578	snRNA		11	1	94919709	125
ENSMUSG00000084731	snRNA	Gm25806	ENSMUST00000122782	snRNA		5	-1	83690125	122
ENSMUSG00000065007	snRNA	Gm26324	ENSMUST00000083073	snRNA		11	1	99856308	107
ENSMUSG00000099033	miRNA	Mir7013	ENSMUST00000183540	miRNA		3	1	95004168	72
ENSMUSG00000072900	miRNA	Mir540	ENSMUST00000102167	miRNA		12	1	109586080	67
ENSMUSG00000065687	snoRNA	Gm23734	ENSMUST00000083753	snoRNA		1	1	127375131	109
ENSMUSG00000092656	miRNA	Gm25239	ENSMUST00000174915	miRNA		8	1	12396403	86
ENSMUSG00000084596	misc_RNA	Gm22342	ENSMUST00000122647	misc_RNA		3	-1	83634874	298
ENSMUSG00000077884	miRNA	Gm24557	ENSMUST00000104692	miRNA		1	1	63161855	89
ENSMUSG00000098839	miRNA	Mir7054	ENSMUST00000183606	miRNA		7	-1	45012487	62
ENSMUSG00000098448	miRNA	Mir6362	ENSMUST00000184329	miRNA		16	1	22605326	107
ENSMUSG00000077058	miRNA	Gm24542	ENSMUST00000103870	miRNA		12	1	101554079	110
ENSMUSG00000064391	snRNA	Gm23625	ENSMUST00000082457	snRNA		6	-1	65989739	100
ENSMUSG00000095851	miRNA	Gm22617	ENSMUST00000175199	miRNA		16	1	36789738	70
ENSMUSG00000096198	snRNA	Gm26133	ENSMUST00000157363	snRNA		13	-1	13298342	100
ENSMUSG00000093039	miRNA	Mir1912	ENSMUST00000175298	miRNA		X	1	147009441	87
ENSMUSG00000106348	miRNA	Mir1a-2	ENSMUST00000198520	miRNA		18	-1	10785552	72
ENSMUSG00000088960	snRNA	Gm22090	ENSMUST00000158335	snRNA		X	-1	105020378	111
ENSMUSG00000095316	protein_coding	Gm21876	ENSMUST00000096511	protein_coding	principal1	X	-1	21175653	282
ENSMUSG00000105330	miRNA	Mir669a-6	ENSMUST00000196127	miRNA		2	1	10484196	87
ENSMUSG00000098873	miRNA	Mir7668	ENSMUST00000183679	miRNA		7	1	29906509	59
ENSMUSG00000105450	scaRNA	Gm22813	ENSMUST00000199948	scaRNA		2	1	106809336	123
ENSMUSG00000089396	snRNA	Gm23027	ENSMUST00000158771	snRNA		15	1	76036459	158
ENSMUSG00000093044	snoRNA	Snord8	ENSMUST00000175303	snoRNA		14	-1	52209894	110
ENSMUSG00000070219	rRNA	n-R5s13	ENSMUST00000093707	rRNA		X	1	151777671	119
ENSMUSG00000093873	snRNA	Gm24540	ENSMUST00000177627	snRNA		14	-1	73767968	107
ENSMUSG00000065105	snoRNA	Gm26130	ENSMUST00000083171	snoRNA		17	1	12919585	138
ENSMUSG00000089384	snoRNA	Gm24680	ENSMUST00000158759	snoRNA		14	1	94929701	126
ENSMUSG00000088754	snRNA	Gm24905	ENSMUST00000158129	snRNA		2	1	34916250	104
ENSMUSG00000055958	pseudogene	Gm9987	ENSMUST00000069768	pseudogene		10	-1	58813142	567
ENSMUSG00000094830	rRNA	n-R5s194	ENSMUST00000104719	rRNA		3	1	4338998	119
ENSMUSG00000087852	misc_RNA	Gm22793	ENSMUST00000157227	misc_RNA		6	-1	145288257	330
ENSMUSG00000093338	miRNA	Mir3090	ENSMUST00000175597	miRNA		2	1	133564708	87
ENSMUSG00000077333	snoRNA	Gm23015	ENSMUST00000104145	snoRNA		5	-1	57128772	128
ENSMUSG00000098771	miRNA	Mir6538	ENSMUST00000183713	miRNA		12	-1	26415010	110
ENSMUSG00000098661	miRNA	Mir7052	ENSMUST00000184821	miRNA		7	1	44470347	65
ENSMUSG00000099134	miRNA	Mir7018	ENSMUST00000184284	miRNA		4	1	137538286	85
ENSMUSG00000096206	snRNA	Gm22317	ENSMUST00000178469	snRNA		12	-1	54738622	164
ENSMUSG00000098395	misc_RNA	Gm27998	ENSMUST00000184902	misc_RNA		5	-1	112215867	361
ENSMUSG00000074720	protein_coding	AC140325.1	ENSMUST00000099245	protein_coding		GL456354.1	-1	27230	486
ENSMUSG00000084432	misc_RNA	Gm23426	ENSMUST00000122483	misc_RNA		19	1	30704081	318
ENSMUSG00000089524	snoRNA	Gm22327	ENSMUST00000158899	snoRNA		17	-1	29984141	108
ENSMUSG00000088595	rRNA	Gm24601	ENSMUST00000157970	rRNA		6	-1	94826923	143
ENSMUSG00000089023	snoRNA	Gm25011	ENSMUST00000158398	snoRNA		10	1	11959880	126
ENSMUSG00000099112	misc_RNA	Gm27406	ENSMUST00000184881	misc_RNA		15	1	102485908	182
ENSMUSG00000088312	snRNA	Gm26181	ENSMUST00000157687	snRNA		8	1	42742807	106
ENSMUSG00000093992	snRNA	Gm26427	ENSMUST00000093648	snRNA		8	-1	7428328	107
ENSMUSG00000088188	snRNA	Gm22214	ENSMUST00000157563	snRNA		5	-1	136096431	172
ENSMUSG00000087922	snRNA	Gm23229	ENSMUST00000157297	snRNA		7	1	118279861	105
ENSMUSG00000084541	rRNA	n-R5s45	ENSMUST00000122592	rRNA		14	-1	12427641	110
ENSMUSG00000105780	snoRNA	Snord80	ENSMUST00000199023	snoRNA		1	1	161037604	77
ENSMUSG00000077682	snoRNA	Gm22493	ENSMUST00000104494	snoRNA		6	-1	56600949	132
ENSMUSG00000088301	rRNA	Gm23381	ENSMUST00000157676	rRNA		X	-1	157638296	94
ENSMUSG00000065600	miRNA	Mir338	ENSMUST00000083666	miRNA		11	-1	120014862	98
ENSMUSG00000094709	miRNA	Gm24488	ENSMUST00000179934	miRNA		2	1	10494882	127
ENSMUSG00000092759	miRNA	Gm25025	ENSMUST00000175018	miRNA		16	1	78050717	111
ENSMUSG00000088275	snRNA	Gm23124	ENSMUST00000157650	snRNA		X	1	134496810	107
ENSMUSG00000095003	snRNA	Gm25173	ENSMUST00000179794	snRNA		4	1	27700671	107
ENSMUSG00000096500	miRNA	Gm23087	ENSMUST00000093626	miRNA		7	-1	11350525	76
ENSMUSG00000072693	protein_coding	Gm10401	ENSMUST00000100848	protein_coding	principal1	5	-1	115098295	607
ENSMUSG00000088475	rRNA	Gm23084	ENSMUST00000157850	rRNA		13	1	3648537	114
ENSMUSG00000093988	snRNA	Gm24861	ENSMUST00000083459	snRNA		16	1	78624747	107
ENSMUSG00000077442	snoRNA	Gm23132	ENSMUST00000104254	snoRNA		11	-1	77658707	132
ENSMUSG00000088823	snoRNA	Gm25226	ENSMUST00000158198	snoRNA		X	1	73752674	123
ENSMUSG00000098856	miRNA	Mir8113	ENSMUST00000184956	miRNA		6	-1	125234812	129
ENSMUSG00000098393	misc_RNA	Gm28000	ENSMUST00000184380	misc_RNA		5	1	109599079	85
ENSMUSG00000064655	snoRNA	Gm25788	ENSMUST00000082721	snoRNA		4	1	123291344	131
ENSMUSG00000104809	miRNA	Gm44485	ENSMUST00000199569	miRNA		X	-1	36381253	137
ENSMUSG00000087965	misc_RNA	Gm25389	ENSMUST00000157340	misc_RNA		15	-1	91617437	286
ENSMUSG00000099079	miRNA	Mir7068	ENSMUST00000183439	miRNA		8	-1	72470089	74
ENSMUSG00000099158	miRNA	Mir6368	ENSMUST00000184136	miRNA		13	-1	28710873	93
ENSMUSG00000087854	rRNA	Gm22790	ENSMUST00000157229	rRNA		12	1	105645843	129
ENSMUSG00000094033	snRNA	Gm24655	ENSMUST00000178790	snRNA		10	-1	23166971	107
ENSMUSG00000084741	misc_RNA	Gm25293	ENSMUST00000122792	misc_RNA		1	1	109804760	285
ENSMUSG00000098632	miRNA	Mir7665	ENSMUST00000184907	miRNA		2	1	120017517	63
ENSMUSG00000093270	miRNA	Mir5134	ENSMUST00000175529	miRNA		17	-1	24234604	78
ENSMUSG00000096808	protein_coding	AC132444.6	ENSMUST00000177921	protein_coding		GL456221.1	1	151235	1500
ENSMUSG00000095209	miRNA	Gm22398	ENSMUST00000174941	miRNA		4	-1	117158433	125
ENSMUSG00000098877	rRNA	Gm27959	ENSMUST00000185172	rRNA		6	1	23519746	111
ENSMUSG00000065898	snRNA	Gm24522	ENSMUST00000083964	snRNA		X	1	128700546	108
ENSMUSG00000065662	rRNA	n-R5s161	ENSMUST00000083728	rRNA		6	1	30379101	114
ENSMUSG00000065426	miRNA	Mir134	ENSMUST00000083492	miRNA		12	1	109734139	71
ENSMUSG00000093815	snRNA	Gm26444	ENSMUST00000178333	snRNA		12	1	54729602	164
ENSMUSG00000088415	snoRNA	Gm24237	ENSMUST00000157790	snoRNA		10	-1	105929743	132
ENSMUSG00000098636	miRNA	Gm27742	ENSMUST00000184667	miRNA		15	-1	82612946	60
ENSMUSG00000093231	miRNA	Gm25297	ENSMUST00000175490	miRNA		12	-1	109321036	67
ENSMUSG00000093480	miRNA	Mir5624	ENSMUST00000176635	miRNA		13	1	93790777	61
ENSMUSG00000077440	snoRNA	Gm23130	ENSMUST00000104252	snoRNA		10	-1	23786543	74
ENSMUSG00000064797	snoRNA	Gm24357	ENSMUST00000082863	snoRNA		9	1	15315522	74
ENSMUSG00000087855	miRNA	Mir432	ENSMUST00000157230	miRNA		12	1	109594956	75
ENSMUSG00000093115	miRNA	Gm25972	ENSMUST00000175374	miRNA		2	1	84150055	101
ENSMUSG00000089145	misc_RNA	Gm25265	ENSMUST00000158520	misc_RNA		2	1	166682074	347
ENSMUSG00000084728	miRNA	Mir1905	ENSMUST00000122779	miRNA		3	-1	88536382	82
ENSMUSG00000098790	miRNA	Mir6942	ENSMUST00000184464	miRNA		13	-1	21396638	61
ENSMUSG00000065195	snRNA	Gm26071	ENSMUST00000083261	snRNA		12	1	35441190	107
ENSMUSG00000097052	snoRNA	Snora43	ENSMUST00000181621	snoRNA		2	-1	26637985	139
ENSMUSG00000066810	protein_coding	Gm10181	ENSMUST00000086238	protein_coding	principal1	9	1	25089422	69
ENSMUSG00000064954	snRNA	Gm24919	ENSMUST00000083020	snRNA		1	1	178390819	106
ENSMUSG00000077049	miRNA	Mir467c	ENSMUST00000103861	miRNA		2	1	10473931	97
ENSMUSG00000099215	miRNA	Gm27682	ENSMUST00000183930	miRNA		12	-1	15020644	110
ENSMUSG00000088564	rRNA	Gm23782	ENSMUST00000157939	rRNA		1	-1	137987776	120
ENSMUSG00000088001	snRNA	Gm22883	ENSMUST00000157376	snRNA		11	-1	87318799	106
ENSMUSG00000064862	snoRNA	Gm25038	ENSMUST00000082928	snoRNA		16	-1	78423859	130
ENSMUSG00000089003	snRNA	Gm23854	ENSMUST00000158378	snRNA		10	-1	64304744	108
ENSMUSG00000084689	rRNA	n-R5s18	ENSMUST00000122740	rRNA		X	1	164133385	121
ENSMUSG00000088441	snRNA	Gm25599	ENSMUST00000157816	snRNA		12	1	65530252	103
ENSMUSG00000077404	snoRNA	Gm25420	ENSMUST00000104216	snoRNA		2	1	80707589	127
ENSMUSG00000094306	snRNA	Gm24924	ENSMUST00000084007	snRNA		18	-1	14647930	164
ENSMUSG00000098291	miRNA	Mir6973a	ENSMUST00000183646	miRNA		17	1	35194972	78
ENSMUSG00000098619	miRNA	Mir6401	ENSMUST00000184499	miRNA		7	1	139779018	109
ENSMUSG00000098919	miRNA	Mir8102	ENSMUST00000184148	miRNA		11	1	97744897	139
ENSMUSG00000089609	miRNA	Gm22095	ENSMUST00000158984	miRNA		2	1	52283077	150
ENSMUSG00000096006	processed_pseudogene	Gm21596	ENSMUST00000178049	processed_pseudogene		2	-1	113920562	1316
ENSMUSG00000106215	miRNA	Mir7218	ENSMUST00000200050	miRNA		17	1	27358097	59
ENSMUSG00000087847	scaRNA	Gm25624	ENSMUST00000157222	scaRNA		X	1	35838127	275
ENSMUSG00000065745	snRNA	Gm25004	ENSMUST00000083811	snRNA		4	1	95524044	161
ENSMUSG00000088906	snoRNA	Gm25438	ENSMUST00000158281	snoRNA		12	-1	36373883	110
ENSMUSG00000092901	miRNA	Mir5130	ENSMUST00000175160	miRNA		14	-1	102982632	84
ENSMUSG00000093091	miRNA	Mir3089	ENSMUST00000175350	miRNA		2	1	30721210	84
ENSMUSG00000099290	miRNA	Mir6985	ENSMUST00000184641	miRNA		19	-1	4263878	61
ENSMUSG00000094723	snoRNA	Gm23356	ENSMUST00000177610	snoRNA		7	-1	59417535	79
ENSMUSG00000105886	scaRNA	Gm22813	ENSMUST00000200346	scaRNA		2	1	106809335	124
ENSMUSG00000094008	snRNA	Gm24168	ENSMUST00000178825	snRNA		10	-1	30942485	107
ENSMUSG00000077752	snoRNA	Gm23530	ENSMUST00000104564	snoRNA		15	1	47800673	137
ENSMUSG00000105238	miRNA	Gm44357	ENSMUST00000195897	miRNA		13	1	21721433	142
ENSMUSG00000065728	snoRNA	Gm26175	ENSMUST00000083794	snoRNA		6	-1	97162947	131
ENSMUSG00000065057	snRNA	Gm25703	ENSMUST00000083123	snRNA		2	-1	129315479	151
ENSMUSG00000105448	scaRNA	Gm25820	ENSMUST00000197479	scaRNA		3	1	88693930	128
ENSMUSG00000088016	snRNA	Gm23830	ENSMUST00000157391	snRNA		3	1	104092381	102
ENSMUSG00000089429	rRNA	Gm26004	ENSMUST00000158804	rRNA		1	-1	181840568	116
ENSMUSG00000094571	miRNA	Gm23551	ENSMUST00000116852	miRNA		6	-1	3051409	121
ENSMUSG00000089041	snoRNA	Gm26173	ENSMUST00000158416	snoRNA		14	1	101283067	136
ENSMUSG00000099037	miRNA	Gm27554	ENSMUST00000185074	miRNA		X	-1	98727412	98
ENSMUSG00000098816	misc_RNA	Gm27786	ENSMUST00000184337	misc_RNA		7	1	142577849	70
ENSMUSG00000099119	miRNA	Mir6546	ENSMUST00000184460	miRNA		1	-1	171064652	62
ENSMUSG00000106377	miRNA	Gm44300	ENSMUST00000196792	miRNA		1	-1	132923744	121
ENSMUSG00000088790	snoRNA	Gm22541	ENSMUST00000158165	snoRNA		4	1	3619189	127
ENSMUSG00000088378	snRNA	Gm25184	ENSMUST00000157753	snRNA		2	1	181512550	163
ENSMUSG00000098688	misc_RNA	Gm27820	ENSMUST00000183628	misc_RNA		8	1	79970390	175
ENSMUSG00000088973	miRNA	Gm23762	ENSMUST00000158348	miRNA		1	-1	60613803	106
ENSMUSG00000089467	miRNA	Gm23700	ENSMUST00000158842	miRNA		7	-1	113667016	102
ENSMUSG00000093443	snoRNA	Gm22871	ENSMUST00000177097	snoRNA		10	-1	77913851	54
ENSMUSG00000077797	snoRNA	Snord19	ENSMUST00000104609	snoRNA		14	-1	31016281	76
ENSMUSG00000077205	snoRNA	Gm25611	ENSMUST00000104017	snoRNA		19	-1	35760065	133
ENSMUSG00000065945	snRNA	Gm23796	ENSMUST00000084011	snRNA		3	1	39666288	160
ENSMUSG00000098314	rRNA	Gm27952	ENSMUST00000184748	rRNA		12	-1	12682618	105
ENSMUSG00000084690	snoRNA	Gm24896	ENSMUST00000122741	snoRNA		9	1	5111399	135
ENSMUSG00000093185	miRNA	Gm25692	ENSMUST00000175444	miRNA		4	-1	45397118	125
ENSMUSG00000088543	snRNA	Gm24961	ENSMUST00000157918	snRNA		16	1	10994386	184
ENSMUSG00000098863	miRNA	Mir8101	ENSMUST00000183986	miRNA		11	-1	102230150	111
ENSMUSG00000089534	snoRNA	Gm25166	ENSMUST00000158909	snoRNA		1	1	17520001	111
ENSMUSG00000099096	miRNA	Mir6945	ENSMUST00000184300	miRNA		13	-1	55507692	68
ENSMUSG00000089584	snRNA	Gm23337	ENSMUST00000158959	snRNA		3	1	45978578	118
ENSMUSG00000098723	miRNA	Gm27332	ENSMUST00000184893	miRNA		14	-1	38899944	112
ENSMUSG00000089222	snRNA	Gm25049	ENSMUST00000158597	snRNA		17	1	30311079	73
ENSMUSG00000099043	miRNA	Mir7022	ENSMUST00000183749	miRNA		4	-1	148146996	61
ENSMUSG00000080669	miRNA	Mir1224	ENSMUST00000117019	miRNA		16	1	20604452	85
ENSMUSG00000098563	miRNA	Mir6402	ENSMUST00000183406	miRNA		4	-1	91373363	80
ENSMUSG00000098824	miRNA	Mir7006	ENSMUST00000183624	miRNA		2	-1	181587968	69
ENSMUSG00000088451	snoRNA	Gm26368	ENSMUST00000157826	snoRNA		X	-1	167364297	118
ENSMUSG00000077150	snoRNA	Gm24581	ENSMUST00000103962	snoRNA		7	-1	135131646	133
ENSMUSG00000095249	rRNA	n-R5s103	ENSMUST00000178755	rRNA		8	-1	123543991	119
ENSMUSG00000088325	snoRNA	Gm25668	ENSMUST00000157700	snoRNA		15	1	98069752	129
ENSMUSG00000094244	miRNA	Gm23967	ENSMUST00000175062	miRNA		5	-1	64101507	78
ENSMUSG00000077741	snoRNA	Gm26344	ENSMUST00000104553	snoRNA		3	-1	116065919	132
ENSMUSG00000084609	misc_RNA	Gm22199	ENSMUST00000122660	misc_RNA		13	1	51014086	126
ENSMUSG00000064644	snRNA	Gm23302	ENSMUST00000082710	snRNA		14	1	118585039	100
ENSMUSG00000064530	snoRNA	Gm23613	ENSMUST00000082596	snoRNA		X	1	36776619	87
ENSMUSG00000089097	snoRNA	Gm25658	ENSMUST00000158472	snoRNA		10	-1	97744884	128
ENSMUSG00000098593	miRNA	Mir7064	ENSMUST00000184553	miRNA		7	-1	143570759	89
ENSMUSG00000106252	miRNA	Mir684-1	ENSMUST00000196622	miRNA		2	-1	80628790	86
ENSMUSG00000077428	snoRNA	Gm24284	ENSMUST00000104240	snoRNA		13	1	58325267	142
ENSMUSG00000077431	snRNA	Gm22591	ENSMUST00000104243	snRNA		6	1	113060698	106
ENSMUSG00000065089	snoRNA	Gm26493	ENSMUST00000083155	snoRNA		8	-1	95746195	136
ENSMUSG00000088798	snRNA	Gm22534	ENSMUST00000158173	snRNA		11	-1	89087151	104
ENSMUSG00000080463	snoRNA	Gm22489	ENSMUST00000116813	snoRNA		1	1	161035850	62
ENSMUSG00000087716	scaRNA	Gm25825	ENSMUST00000157091	scaRNA		X	-1	121308340	124
ENSMUSG00000106523	miRNA	Gm44497	ENSMUST00000196306	miRNA		4	1	67633153	77
ENSMUSG00000089393	snRNA	Gm23022	ENSMUST00000158768	snRNA		5	-1	40405929	180
ENSMUSG00000087833	misc_RNA	Gm23959	ENSMUST00000157208	misc_RNA		11	1	17548286	324
ENSMUSG00000087830	misc_RNA	Gm22820	ENSMUST00000157205	misc_RNA		19	-1	8682163	329
ENSMUSG00000089434	snRNA	Gm23197	ENSMUST00000158809	snRNA		X	-1	168582002	112
ENSMUSG00000065029	snRNA	Gm25199	ENSMUST00000083095	snRNA		3	-1	103445800	104
ENSMUSG00000096287	snoRNA	Gm22252	ENSMUST00000179316	snoRNA		7	-1	59525977	79
ENSMUSG00000093037	miRNA	Mir3066	ENSMUST00000175296	miRNA		12	1	17355392	83
ENSMUSG00000099316	misc_RNA	Gm27796	ENSMUST00000183863	misc_RNA		19	-1	17060397	261
ENSMUSG00000065613	miRNA	Mir92-2	ENSMUST00000083679	miRNA		X	-1	52741928	91
ENSMUSG00000088169	snoRNA	Gm22059	ENSMUST00000157544	snoRNA		11	-1	98711089	104
ENSMUSG00000094038	snoRNA	Gm24657	ENSMUST00000180085	snoRNA		7	-1	59366444	79
ENSMUSG00000098355	misc_RNA	Gm27553	ENSMUST00000183460	misc_RNA		5	1	100421968	74
ENSMUSG00000088761	snRNA	Gm24392	ENSMUST00000158136	snRNA		14	1	56416766	103
ENSMUSG00000065818	snoRNA	Snord35a	ENSMUST00000083884	snoRNA		7	-1	45126435	90
ENSMUSG00000064851	snRNA	Gm24525	ENSMUST00000082917	snRNA		5	-1	7177856	151
ENSMUSG00000099070	miRNA	Mir8119	ENSMUST00000183371	miRNA		4	-1	129557811	129
ENSMUSG00000065239	snRNA	Gm22971	ENSMUST00000083305	snRNA		6	-1	96469531	97
ENSMUSG00000098967	misc_RNA	Gm27845	ENSMUST00000184479	misc_RNA		14	1	61629093	114
ENSMUSG00000084625	snoRNA	Gm25544	ENSMUST00000122676	snoRNA		2	1	22902388	120
ENSMUSG00000065018	snRNA	Gm23511	ENSMUST00000083084	snRNA		3	1	48954722	164
ENSMUSG00000099118	miRNA	Mir8092	ENSMUST00000183735	miRNA		19	1	40894703	87
ENSMUSG00000065484	miRNA	Mir130a	ENSMUST00000083550	miRNA		2	-1	84741178	64
ENSMUSG00000084564	miRNA	Mir1895	ENSMUST00000122615	miRNA		3	-1	134240583	79
ENSMUSG00000076370	miRNA	Gm22369	ENSMUST00000102415	miRNA		19	1	9855319	104
ENSMUSG00000077784	snoRNA	Gm23911	ENSMUST00000104596	snoRNA		7	1	58005205	134
ENSMUSG00000105972	miRNA	Mir1843a	ENSMUST00000200234	miRNA		12	-1	80391677	65
ENSMUSG00000098445	miRNA	Mir6972	ENSMUST00000184774	miRNA		17	-1	34857632	64
ENSMUSG00000093157	miRNA	Mir3098	ENSMUST00000175416	miRNA		6	1	125195792	87
ENSMUSG00000076958	miRNA	Gm24935	ENSMUST00000103770	miRNA		13	1	87456778	110
ENSMUSG00000080645	miRNA	Mir1198	ENSMUST00000116995	miRNA		X	1	7807101	121
ENSMUSG00000077430	snoRNA	Gm22592	ENSMUST00000104242	snoRNA		X	-1	21500496	131
ENSMUSG00000089105	rRNA	Gm23115	ENSMUST00000158480	rRNA		17	-1	71506543	108
ENSMUSG00000089504	snRNA	Gm23475	ENSMUST00000158879	snRNA		15	-1	58143269	62
ENSMUSG00000080673	snRNA	Gm23336	ENSMUST00000117023	snRNA		3	1	108498118	123
ENSMUSG00000106264	miRNA	Mir7646	ENSMUST00000196502	miRNA		X	1	135746716	54
ENSMUSG00000094738	snRNA	Gm26177	ENSMUST00000178683	snRNA		10	-1	54311331	107
ENSMUSG00000077734	snoRNA	Snord83b	ENSMUST00000104546	snoRNA		15	-1	80078591	94
ENSMUSG00000076006	miRNA	Mir376c	ENSMUST00000102052	miRNA		12	1	109722718	86
ENSMUSG00000065570	miRNA	Mir412	ENSMUST00000083636	miRNA		12	1	109743289	80
ENSMUSG00000096303	snRNA	Gm25211	ENSMUST00000177553	snRNA		5	-1	86916322	107
ENSMUSG00000064609	snoRNA	Gm25635	ENSMUST00000082675	snoRNA		10	-1	9852149	131
ENSMUSG00000089044	snRNA	Gm26170	ENSMUST00000158419	snRNA		16	1	18355616	148
ENSMUSG00000084590	miRNA	Mir1896	ENSMUST00000122641	miRNA		13	1	21445160	81
ENSMUSG00000098980	miRNA	Mir6397	ENSMUST00000183919	miRNA		4	1	108087357	93
ENSMUSG00000093122	miRNA	Mir1264	ENSMUST00000175381	miRNA		X	1	147010601	86
ENSMUSG00000065473	miRNA	Mir19b-2	ENSMUST00000083539	miRNA		X	-1	52742066	84
ENSMUSG00000105768	miRNA	Gm44495	ENSMUST00000195954	miRNA		10	-1	109326851	83
ENSMUSG00000092818	miRNA	Gm27361	ENSMUST00000175077	miRNA		8	-1	117547026	55
ENSMUSG00000070263	snRNA	Gm22365	ENSMUST00000093750	snRNA		19	-1	61164481	117
ENSMUSG00000077655	snoRNA	Gm23319	ENSMUST00000104467	snoRNA		13	-1	75963787	131
ENSMUSG00000098444	snRNA	Gm27811	ENSMUST00000185022	snRNA		3	-1	85962910	64
ENSMUSG00000088585	snoRNA	Gm22963	ENSMUST00000157960	snoRNA		1	1	10921670	91
ENSMUSG00000093684	miRNA	Gm27857	ENSMUST00000176930	miRNA		14	-1	79562292	126
ENSMUSG00000094524	snoRNA	Gm22909	ENSMUST00000179190	snoRNA		7	-1	59520362	79
ENSMUSG00000096841	snRNA	Gm25596	ENSMUST00000178368	snRNA		10	1	29349585	107
ENSMUSG00000095357	snoRNA	Gm23286	ENSMUST00000178963	snoRNA		7	-1	59561550	79
ENSMUSG00000088730	snoRNA	Gm23892	ENSMUST00000158105	snoRNA		10	1	14984670	130
ENSMUSG00000093331	miRNA	Gm22120	ENSMUST00000175590	miRNA		12	-1	105865793	70
ENSMUSG00000098349	miRNA	Gm27711	ENSMUST00000183802	miRNA		11	-1	60302824	118
ENSMUSG00000095449	rRNA	n-R5s112	ENSMUST00000178208	rRNA		8	-1	123559319	119
ENSMUSG00000094210	miRNA	Gm23450	ENSMUST00000178285	miRNA		7	1	3415066	91
ENSMUSG00000098982	miRNA	Gm28002	ENSMUST00000184832	miRNA		3	-1	3004229	100
ENSMUSG00000088547	snRNA	Gm24965	ENSMUST00000157922	snRNA		4	1	25940365	106
ENSMUSG00000088177	misc_RNA	Gm23098	ENSMUST00000157552	misc_RNA		6	1	127849221	299
ENSMUSG00000064543	snRNA	Gm22979	ENSMUST00000082609	snRNA		15	1	36169796	159
ENSMUSG00000084663	miRNA	Mir1900	ENSMUST00000122714	miRNA		9	-1	21032328	78
ENSMUSG00000093041	miRNA	Gm26455	ENSMUST00000175300	miRNA		5	-1	118418818	92
ENSMUSG00000105988	miRNA	Gm44479	ENSMUST00000196489	miRNA		15	1	101645144	116
ENSMUSG00000088876	snoRNA	Gm25861	ENSMUST00000158251	snoRNA		9	-1	25539205	109
ENSMUSG00000077576	snoRNA	Gm24889	ENSMUST00000104388	snoRNA		10	1	38179453	132
ENSMUSG00000065374	snRNA	Gm22738	ENSMUST00000083440	snRNA		14	-1	57831209	147
ENSMUSG00000077962	miRNA	Mir874	ENSMUST00000104769	miRNA		13	-1	58023200	76
ENSMUSG00000088406	misc_RNA	Gm25883	ENSMUST00000157781	misc_RNA		17	1	32027938	271
ENSMUSG00000098539	miRNA	Mir133c	ENSMUST00000184068	miRNA		2	-1	29475294	80
ENSMUSG00000065232	snRNA	Gm22973	ENSMUST00000083298	snRNA		12	1	59040335	191
ENSMUSG00000084535	miRNA	Mir1906-1	ENSMUST00000122586	miRNA		12	1	109544541	80
ENSMUSG00000098808	miRNA	Mir7009	ENSMUST00000184519	miRNA		3	-1	36475524	64
ENSMUSG00000088689	scaRNA	Scarna17	ENSMUST00000158064	scaRNA		18	-1	74778469	79
ENSMUSG00000098436	rRNA	Gm27490	ENSMUST00000184754	rRNA		X	1	162237099	128
ENSMUSG00000094667	snoRNA	Gm24872	ENSMUST00000178434	snoRNA		7	-1	59421265	79
ENSMUSG00000093277	snoRNA	Gm26236	ENSMUST00000175536	snoRNA		2	1	32675109	137
ENSMUSG00000080368	miRNA	Gm25773	ENSMUST00000116718	miRNA		3	-1	26626311	127
ENSMUSG00000093023	misc_RNA	Gm27826	ENSMUST00000175282	misc_RNA		6	-1	122305798	255
ENSMUSG00000093351	miRNA	Mir3072	ENSMUST00000175610	miRNA		12	1	109747878	83
ENSMUSG00000076271	miRNA	Mir697	ENSMUST00000102316	miRNA		4	1	124731694	109
ENSMUSG00000077552	snoRNA	Gm23709	ENSMUST00000104364	snoRNA		4	-1	43136628	130
ENSMUSG00000088151	scaRNA	Gm26347	ENSMUST00000157526	scaRNA		10	1	128435914	131
ENSMUSG00000099213	miRNA	Gm27686	ENSMUST00000185123	miRNA		9	-1	52103779	91
ENSMUSG00000088255	snoRNA	Gm24288	ENSMUST00000157630	snoRNA		8	-1	6223962	144
ENSMUSG00000077591	snoRNA	Gm26016	ENSMUST00000104403	snoRNA		10	-1	45268731	129
ENSMUSG00000092988	miRNA	Mir3093	ENSMUST00000175247	miRNA		3	1	88215171	87
ENSMUSG00000089048	misc_RNA	Gm26167	ENSMUST00000158423	misc_RNA		10	-1	25281852	253
ENSMUSG00000089029	snoRNA	Gm25009	ENSMUST00000158404	snoRNA		3	1	103392933	102
ENSMUSG00000089477	rRNA	Gm25365	ENSMUST00000158852	rRNA		9	1	12780165	121
ENSMUSG00000095116	snRNA	Gm23714	ENSMUST00000179259	snRNA		7	1	15695213	105
ENSMUSG00000084447	snoRNA	Gm26251	ENSMUST00000122498	snoRNA		14	1	78603710	122
ENSMUSG00000065223	snRNA	Gm25792	ENSMUST00000083289	snRNA		1	1	33293676	100
ENSMUSG00000077503	snoRNA	Gm24231	ENSMUST00000104315	snoRNA		8	-1	15227537	133
ENSMUSG00000096384	miRNA	Gm25352	ENSMUST00000179815	miRNA		3	1	5881041	110
ENSMUSG00000093256	miRNA	Gm22933	ENSMUST00000175515	miRNA		16	1	90953795	74
ENSMUSG00000065188	snRNA	Gm25140	ENSMUST00000083254	snRNA		16	1	37980087	140
ENSMUSG00000088579	snoRNA	Gm25460	ENSMUST00000157954	snoRNA		1	-1	145291480	127
ENSMUSG00000087719	ribozyme	Gm26464	ENSMUST00000157094	ribozyme		10	-1	42820767	305
ENSMUSG00000077991	miRNA	Mir466n	ENSMUST00000104798	miRNA		2	1	10513741	94
ENSMUSG00000088487	misc_RNA	Gm26045	ENSMUST00000157862	misc_RNA		14	1	32023344	97
ENSMUSG00000087815	snRNA	Gm22491	ENSMUST00000157190	snRNA		3	1	58975630	102
ENSMUSG00000065044	rRNA	n-R5s169	ENSMUST00000083110	rRNA		5	1	3561154	120
ENSMUSG00000094923	snoRNA	Gm24760	ENSMUST00000178530	snoRNA		7	-1	59751582	94
ENSMUSG00000088118	misc_RNA	Gm24059	ENSMUST00000157493	misc_RNA		6	1	8439353	312
ENSMUSG00000087774	misc_RNA	Gm22320	ENSMUST00000157149	misc_RNA		10	-1	70501503	312
ENSMUSG00000076343	miRNA	Gm25213	ENSMUST00000102388	miRNA		13	1	96357111	113
ENSMUSG00000089353	rRNA	Gm25488	ENSMUST00000158728	rRNA		1	-1	161552666	118
ENSMUSG00000064386	snRNA	Gm26449	ENSMUST00000082452	snRNA		12	1	14878495	104
ENSMUSG00000096790	snRNA	Gm22995	ENSMUST00000179670	snRNA		10	-1	13888643	107
ENSMUSG00000094720	rRNA	n-R5s100	ENSMUST00000178106	rRNA		8	-1	123538904	119
ENSMUSG00000080625	miRNA	Gm22679	ENSMUST00000116975	miRNA		1	1	29301480	100
ENSMUSG00000065482	miRNA	Mir302c	ENSMUST00000083548	miRNA		3	1	127545363	68
ENSMUSG00000064634	snoRNA	Gm22620	ENSMUST00000082700	snoRNA		9	1	15315189	133
ENSMUSG00000077502	snoRNA	Gm24232	ENSMUST00000104314	snoRNA		15	-1	69451146	132
ENSMUSG00000093296	miRNA	Mir3102	ENSMUST00000175555	miRNA		7	-1	100882409	104
ENSMUSG00000064938	snoRNA	Gm50450	ENSMUST00000083004	snoRNA		12	-1	87437817	136
ENSMUSG00000093404	miRNA	Gm25190	ENSMUST00000176664	miRNA		10	-1	116531740	95
ENSMUSG00000089436	rRNA	Gm23198	ENSMUST00000158811	rRNA		13	1	116675878	91
ENSMUSG00000087893	snRNA	Gm23441	ENSMUST00000157268	snRNA		3	-1	17803747	127
ENSMUSG00000093208	miRNA	Gm27325	ENSMUST00000175467	miRNA		18	-1	43477777	74
ENSMUSG00000092793	miRNA	Mir466m	ENSMUST00000175052	miRNA		2	1	10466663	84
ENSMUSG00000099238	miRNA	Mir7001	ENSMUST00000184769	miRNA		2	-1	93422007	79
ENSMUSG00000065413	miRNA	Mir367	ENSMUST00000083479	miRNA		3	1	127545733	75
ENSMUSG00000065802	snRNA	Gm23041	ENSMUST00000083868	snRNA		10	-1	109368193	106
ENSMUSG00000076999	miRNA	Gm22426	ENSMUST00000103811	miRNA		1	1	105574687	96
ENSMUSG00000077621	snoRNA	Gm23772	ENSMUST00000104433	snoRNA		11	1	22846868	102
ENSMUSG00000089117	snRNA	Gm25903	ENSMUST00000158492	snRNA		16	1	36438644	103
ENSMUSG00000064601	snRNA	Gm25634	ENSMUST00000082667	snRNA		1	1	35761602	105
ENSMUSG00000105902	miRNA	Gm49348	ENSMUST00000200105	miRNA		6	-1	99076057	147
ENSMUSG00000064940	snRNA	Gm23239	ENSMUST00000083006	snRNA		7	-1	77910320	181
ENSMUSG00000096018	snRNA	Gm26435	ENSMUST00000179026	snRNA		9	-1	30291974	107
ENSMUSG00000093967	snRNA	Gm26180	ENSMUST00000179942	snRNA		10	-1	89821446	107
ENSMUSG00000088990	scaRNA	Gm22767	ENSMUST00000158365	scaRNA		4	-1	132838547	165
ENSMUSG00000094527	snoRNA	Gm22910	ENSMUST00000178568	snoRNA		6	-1	53872148	132
ENSMUSG00000095596	miRNA	Gm24303	ENSMUST00000178237	miRNA		6	-1	29150679	126
ENSMUSG00000065017	snRNA	Gm23510	ENSMUST00000083083	snRNA		6	-1	97572238	163
ENSMUSG00000088360	snRNA	Gm23500	ENSMUST00000157735	snRNA		3	1	63770212	98
ENSMUSG00000088950	rRNA	Gm24939	ENSMUST00000158325	rRNA		11	1	59813137	137
ENSMUSG00000077421	snRNA	Gm24283	ENSMUST00000104233	snRNA		8	1	121830436	107
ENSMUSG00000095943	miRNA	Gm25197	ENSMUST00000175516	miRNA		13	-1	73924710	126
ENSMUSG00000096595	snoRNA	Gm25742	ENSMUST00000179530	snoRNA		7	-1	59550316	79
ENSMUSG00000065080	snRNA	Gm26497	ENSMUST00000083146	snRNA		8	-1	122520674	107
ENSMUSG00000089366	misc_RNA	Gm23824	ENSMUST00000158741	misc_RNA		11	-1	50511177	276
ENSMUSG00000095414	snoRNA	Gm23923	ENSMUST00000104108	snoRNA		13	-1	8956064	133
ENSMUSG00000092652	miRNA	Mir3104	ENSMUST00000174911	miRNA		7	1	141992179	63
ENSMUSG00000088980	miRNA	Mir669m-2	ENSMUST00000158355	miRNA		2	1	10513434	98
ENSMUSG00000089169	misc_RNA	Gm25413	ENSMUST00000158544	misc_RNA		1	1	97936400	312
ENSMUSG00000094513	snoRNA	Gm24566	ENSMUST00000179286	snoRNA		7	-1	59445581	79
ENSMUSG00000077511	snRNA	Gm25875	ENSMUST00000104323	snRNA		15	1	60084788	107
ENSMUSG00000064897	snoRNA	Gm22504	ENSMUST00000082963	snoRNA		7	-1	105642476	139
ENSMUSG00000094099	snoRNA	Gm25823	ENSMUST00000101995	snoRNA		7	-1	59522233	78
ENSMUSG00000065193	snRNA	Gm23459	ENSMUST00000083259	snRNA		14	-1	106261253	131
ENSMUSG00000096015	rRNA	n-R5s134	ENSMUST00000178983	rRNA		8	-1	123596575	119
ENSMUSG00000105878	miRNA	Gm44330	ENSMUST00000200106	miRNA		8	-1	83929830	143
ENSMUSG00000064850	snoRNA	Gm23443	ENSMUST00000082916	snoRNA		4	-1	93545277	128
ENSMUSG00000077700	snoRNA	Gm24069	ENSMUST00000104512	snoRNA		12	1	39461530	127
ENSMUSG00000088830	snRNA	Gm23545	ENSMUST00000158205	snRNA		15	1	52496885	104
ENSMUSG00000096692	snRNA	Gm23191	ENSMUST00000179147	snRNA		10	-1	87364146	107
ENSMUSG00000092784	miRNA	Mir3077	ENSMUST00000175043	miRNA		14	1	57798424	64
ENSMUSG00000088323	snoRNA	Gm25663	ENSMUST00000157698	snoRNA		1	1	143778928	135
ENSMUSG00000076144	miRNA	Mir709	ENSMUST00000102190	miRNA		8	1	84086099	88
ENSMUSG00000093322	rRNA	Gm24971	ENSMUST00000175581	rRNA		12	-1	54666786	110
ENSMUSG00000078061	miRNA	Gm22824	ENSMUST00000104867	miRNA		2	1	28608195	92
ENSMUSG00000104635	miRNA	Gm44377	ENSMUST00000199039	miRNA		5	-1	51223674	87
ENSMUSG00000076068	miRNA	Mir678	ENSMUST00000102114	miRNA		10	-1	76207409	84
ENSMUSG00000077563	snoRNA	Snora68	ENSMUST00000104375	snoRNA		8	-1	70895889	131
ENSMUSG00000089000	snRNA	Gm23853	ENSMUST00000158375	snRNA		8	1	111879304	104
ENSMUSG00000095587	snoRNA	Gm22629	ENSMUST00000178272	snoRNA		7	-1	59585884	79
ENSMUSG00000077305	snoRNA	Gm22470	ENSMUST00000104117	snoRNA		18	1	17034662	130
ENSMUSG00000088693	snoRNA	Gm22330	ENSMUST00000158068	snoRNA		13	1	31352980	115
ENSMUSG00000088253	snRNA	Gm24285	ENSMUST00000157628	snRNA		10	1	57174030	100
ENSMUSG00000077281	snoRNA	Gm26396	ENSMUST00000104093	snoRNA		2	-1	94792336	132
ENSMUSG00000105164	miRNA	Gm44337	ENSMUST00000196553	miRNA		2	1	76318482	114
ENSMUSG00000077768	snoRNA	Gm25216	ENSMUST00000104580	snoRNA		19	-1	42699902	126
ENSMUSG00000096634	snoRNA	Snord116l9	ENSMUST00000101891	snoRNA		7	-1	59897254	94
ENSMUSG00000065042	snRNA	Gm24043	ENSMUST00000083108	snRNA		14	1	96444955	116
ENSMUSG00000084473	snRNA	Gm25784	ENSMUST00000122524	snRNA		7	1	40879658	81
ENSMUSG00000094994	snoRNA	Gm22046	ENSMUST00000179027	snoRNA		7	-1	59749049	94
ENSMUSG00000064823	snoRNA	Snord82	ENSMUST00000082889	snoRNA		1	-1	86356330	70
ENSMUSG00000065262	snoRNA	Gm23451	ENSMUST00000083328	snoRNA		11	-1	99017152	122
ENSMUSG00000064994	snoRNA	Gm22422	ENSMUST00000083060	snoRNA		16	-1	56035887	135
ENSMUSG00000088449	snRNA	Gm23559	ENSMUST00000157824	snRNA		7	-1	123382771	103
ENSMUSG00000065313	snRNA	Gm26062	ENSMUST00000083379	snRNA		7	1	18549085	107
ENSMUSG00000096535	miRNA	Gm24755	ENSMUST00000179691	miRNA		16	-1	60369163	110
ENSMUSG00000094440	snRNA	Gm25453	ENSMUST00000082733	snRNA		18	1	86349586	107
ENSMUSG00000088685	snoRNA	Gm23995	ENSMUST00000158060	snoRNA		5	1	144774425	129
ENSMUSG00000076364	miRNA	Gm24049	ENSMUST00000102409	miRNA		2	1	27401852	100
ENSMUSG00000064455	rRNA	n-R5s56	ENSMUST00000082521	rRNA		13	1	103396202	105
ENSMUSG00000065200	snoRNA	Gm24613	ENSMUST00000083266	snoRNA		12	-1	31259062	130
ENSMUSG00000084500	misc_RNA	Gm25320	ENSMUST00000122551	misc_RNA		5	1	89681916	324
ENSMUSG00000105497	miRNA	Mir191	ENSMUST00000196210	miRNA		9	1	108568319	74
ENSMUSG00000076398	miRNA	Mir676	ENSMUST00000102443	miRNA		X	1	100381097	89
ENSMUSG00000084733	misc_RNA	Gm25808	ENSMUST00000122784	misc_RNA		13	1	102228669	284
ENSMUSG00000064791	snoRNA	Snord14e	ENSMUST00000082857	snoRNA		9	1	40804748	90
ENSMUSG00000098299	miRNA	Mir7224	ENSMUST00000184202	miRNA		2	1	67675457	60
ENSMUSG00000088784	snoRNA	Gm25370	ENSMUST00000158159	snoRNA		7	1	142153864	94
ENSMUSG00000088672	snRNA	Gm23664	ENSMUST00000158047	snRNA		10	-1	127138617	89
ENSMUSG00000099244	misc_RNA	Gm27542	ENSMUST00000184184	misc_RNA		6	1	17696894	256
ENSMUSG00000064441	snoRNA	Snord37	ENSMUST00000082507	snoRNA		10	1	81178950	64
ENSMUSG00000099197	miRNA	Mir7034	ENSMUST00000184682	miRNA		5	-1	135735889	84
ENSMUSG00000104747	miRNA	Mir292b	ENSMUST00000196199	miRNA		7	-1	3219259	62
ENSMUSG00000093191	misc_RNA	Gm22876	ENSMUST00000175450	misc_RNA		14	-1	31837181	298
ENSMUSG00000088491	miRNA	Mir1953	ENSMUST00000157866	miRNA		2	-1	151967617	89
ENSMUSG00000070127	miRNA	Mir146b	ENSMUST00000093619	miRNA		19	1	46342762	109
ENSMUSG00000092953	miRNA	Gm26217	ENSMUST00000175212	miRNA		7	-1	5127715	84
ENSMUSG00000077474	snoRNA	Gm24792	ENSMUST00000104286	snoRNA		5	-1	83723589	128
ENSMUSG00000065893	rRNA	n-R5s151	ENSMUST00000083959	rRNA		7	1	16471813	119
ENSMUSG00000099168	misc_RNA	Gm27717	ENSMUST00000183933	misc_RNA		16	-1	41066576	151
ENSMUSG00000087802	snoRNA	Gm25979	ENSMUST00000157177	snoRNA		10	-1	11330626	138
ENSMUSG00000087756	snRNA	Gm23469	ENSMUST00000157131	snRNA		14	1	48652499	104
ENSMUSG00000117083	pseudogene	Gm49800	ENSMUST00000233206	pseudogene		14	1	19617521	186
ENSMUSG00000078488	protein_coding	Gm10945	ENSMUST00000105596	protein_coding	principal1	10	-1	6761761	60
ENSMUSG00000084423	miRNA	Gm25109	ENSMUST00000122474	miRNA		13	1	94517162	114
ENSMUSG00000064446	snRNA	Gm26228	ENSMUST00000082512	snRNA		14	1	33644495	107
ENSMUSG00000093302	miRNA	Gm23801	ENSMUST00000175561	miRNA		5	-1	29336846	67
ENSMUSG00000088453	misc_RNA	Gm25706	ENSMUST00000157828	misc_RNA		17	-1	80196404	247
ENSMUSG00000098504	miRNA	Mir6351	ENSMUST00000183826	miRNA		1	-1	73855575	99
ENSMUSG00000098451	miRNA	Mir6952	ENSMUST00000185092	miRNA		15	-1	76064888	61
ENSMUSG00000092855	miRNA	Gm25958	ENSMUST00000175114	miRNA		15	-1	40186099	71
ENSMUSG00000070182	snRNA	Gm24817	ENSMUST00000093672	snRNA		1	-1	172843638	105
ENSMUSG00000087767	rRNA	Gm23983	ENSMUST00000157142	rRNA		2	-1	121891684	114
ENSMUSG00000077413	snoRNA	Gm23389	ENSMUST00000104225	snoRNA		1	-1	94615704	69
ENSMUSG00000049202	pseudogene	4930515G13Rik	ENSMUST00000057521	pseudogene		17	-1	21801658	492
ENSMUSG00000077628	snoRNA	Gm23768	ENSMUST00000104440	snoRNA		X	-1	132553844	131
ENSMUSG00000077890	miRNA	Mir875	ENSMUST00000104698	miRNA		15	-1	35661047	78
ENSMUSG00000080364	snoRNA	Gm25777	ENSMUST00000116714	snoRNA		16	-1	18240842	126
ENSMUSG00000117327	pseudogene	Gm6467	ENSMUST00000232683	pseudogene		16	1	21896506	609
ENSMUSG00000088204	miRNA	Gm23391	ENSMUST00000157579	miRNA		9	1	104994916	104
ENSMUSG00000080544	ribozyme	Gm22714	ENSMUST00000116894	ribozyme		19	-1	37149162	78
ENSMUSG00000095121	snRNA	Gm23216	ENSMUST00000179545	snRNA		1	-1	45685562	107
ENSMUSG00000093085	miRNA	Gm24325	ENSMUST00000175344	miRNA		6	1	48420769	74
ENSMUSG00000089597	rRNA	Gm24976	ENSMUST00000158972	rRNA		2	1	29459194	135
ENSMUSG00000088095	snoRNA	Gm23669	ENSMUST00000157470	snoRNA		14	1	118299990	128
ENSMUSG00000088141	miRNA	Mir1962	ENSMUST00000157516	miRNA		7	1	135566162	121
ENSMUSG00000064551	snRNA	Gm24624	ENSMUST00000082617	snRNA		X	1	116345732	164
ENSMUSG00000099010	misc_RNA	Gm27357	ENSMUST00000183754	misc_RNA		5	-1	112228742	135
ENSMUSG00000064748	rRNA	n-R5s28	ENSMUST00000082814	rRNA		17	1	47848834	119
ENSMUSG00000096264	miRNA	Gm23108	ENSMUST00000178295	miRNA		2	1	10484490	124
ENSMUSG00000078032	miRNA	Mir291b	ENSMUST00000104838	miRNA		7	1	3219482	79
ENSMUSG00000098279	miRNA	Mir6908	ENSMUST00000184056	miRNA		10	-1	78445157	63
ENSMUSG00000093063	rRNA	Gm23152	ENSMUST00000175322	rRNA		2	-1	166655142	116
ENSMUSG00000089581	snRNA	Gm23341	ENSMUST00000158956	snRNA		11	1	60735861	97
ENSMUSG00000065644	snoRNA	Gm25859	ENSMUST00000083710	snoRNA		2	1	19934863	91
ENSMUSG00000079061	protein_coding	Gm11042	ENSMUST00000110441	protein_coding	principal1	12	-1	74316394	120
ENSMUSG00000105178	miRNA	Mir376a	ENSMUST00000197584	miRNA		12	1	109723781	68
ENSMUSG00000065569	miRNA	Mir137	ENSMUST00000083635	miRNA		3	1	118433857	73
ENSMUSG00000095791	snRNA	Gm26295	ENSMUST00000179690	snRNA		16	1	30814162	107
ENSMUSG00000093074	snRNA	Gm25949	ENSMUST00000175333	snRNA		9	-1	86699156	114
ENSMUSG00000091306	protein_coding	Gm17606	ENSMUST00000169818	protein_coding	principal1	14	1	54640952	234
ENSMUSG00000077771	snoRNA	Gm22374	ENSMUST00000104583	snoRNA		8	-1	129113426	132
ENSMUSG00000088904	snRNA	Gm25440	ENSMUST00000158279	snRNA		18	-1	49581849	154
ENSMUSG00000089267	snoRNA	Gm22890	ENSMUST00000158642	snoRNA		15	-1	84323352	144
ENSMUSG00000094301	snRNA	Gm24925	ENSMUST00000178157	snRNA		16	-1	50920648	107
ENSMUSG00000095456	protein_coding	Il11ra2	ENSMUST00000179253	protein_coding		JH584293.1	1	10948	1299
ENSMUSG00000088250	snRNA	Gm26393	ENSMUST00000157625	snRNA		11	-1	3656791	129
ENSMUSG00000077257	snoRNA	Gm26080	ENSMUST00000104069	snoRNA		1	-1	118453485	131
ENSMUSG00000065474	miRNA	Mir141	ENSMUST00000083540	miRNA		6	-1	124717985	72
ENSMUSG00000077342	snoRNA	Gm24670	ENSMUST00000104154	snoRNA		2	1	19691288	132
ENSMUSG00000065405	miRNA	Mir30a	ENSMUST00000083471	miRNA		1	1	23272269	71
ENSMUSG00000098641	snoRNA	Rnu3b4	ENSMUST00000184171	snoRNA		11	1	87462286	215
ENSMUSG00000065507	miRNA	Mir204	ENSMUST00000083573	miRNA		19	1	22750605	68
ENSMUSG00000064704	rRNA	n-R5s180	ENSMUST00000082770	rRNA		5	-1	149281223	106
ENSMUSG00000065708	snRNA	Gm22826	ENSMUST00000083774	snRNA		3	-1	102952113	165
ENSMUSG00000065454	miRNA	Mir124a-3	ENSMUST00000083520	miRNA		2	1	180894040	68
ENSMUSG00000065187	snoRNA	Gm25136	ENSMUST00000083253	snoRNA		6	1	135584192	115
ENSMUSG00000096244	protein_coding	AC102264.1	ENSMUST00000177979	protein_coding		GL456219.1	-1	150163	903
ENSMUSG00000099011	miRNA	Mir6380	ENSMUST00000184334	miRNA		3	-1	137783615	81
ENSMUSG00000092905	misc_RNA	Gm25735	ENSMUST00000175164	misc_RNA		7	1	127191027	215
ENSMUSG00000077572	snoRNA	Gm24886	ENSMUST00000104384	snoRNA		2	-1	21795055	123
ENSMUSG00000087958	misc_RNA	Gm22563	ENSMUST00000157333	misc_RNA		4	1	51540747	269
ENSMUSG00000065421	miRNA	Mirlet7a-1	ENSMUST00000083487	miRNA		13	-1	48538272	94
ENSMUSG00000070240	snRNA	Gm23516	ENSMUST00000093728	snRNA		X	-1	15896769	107
ENSMUSG00000054379	pseudogene	2410024N13Rik	ENSMUST00000090704	pseudogene		3	-1	103198975	669
ENSMUSG00000094470	snoRNA	Gm25936	ENSMUST00000179952	snoRNA		X	-1	135314429	114
ENSMUSG00000077227	snoRNA	Gm22272	ENSMUST00000104039	snoRNA		19	-1	11933628	134
ENSMUSG00000064764	snRNA	Gm23517	ENSMUST00000082830	snRNA		15	-1	85351254	192
ENSMUSG00000070133	miRNA	Mir434	ENSMUST00000093625	miRNA		12	1	109594506	94
ENSMUSG00000094609	snoRNA	Gm25870	ENSMUST00000179845	snoRNA		7	-1	59619095	79
ENSMUSG00000084478	snRNA	Gm26425	ENSMUST00000122529	snRNA		4	1	99909797	82
ENSMUSG00000098592	miRNA	Mir6917	ENSMUST00000184111	miRNA		10	-1	128584497	61
ENSMUSG00000088943	misc_RNA	Gm23259	ENSMUST00000158318	misc_RNA		1	1	15879530	303
ENSMUSG00000105060	snoRNA	Gm26457	ENSMUST00000199062	snoRNA		1	1	63178686	35
ENSMUSG00000077674	snoRNA	Gm24470	ENSMUST00000104486	snoRNA		X	-1	82692370	132
ENSMUSG00000094486	miRNA	Gm23268	ENSMUST00000175494	miRNA		5	-1	135837372	78
ENSMUSG00000104558	miRNA	Gm44403	ENSMUST00000198554	miRNA		10	1	107480406	129
ENSMUSG00000088509	snoRNA	Gm22789	ENSMUST00000157884	snoRNA		11	1	12692813	130
ENSMUSG00000088005	snoRNA	Gm24787	ENSMUST00000157380	snoRNA		15	1	73349799	123
ENSMUSG00000079439	protein_coding	Gm11116	ENSMUST00000113257	protein_coding	principal1	5	-1	88111530	54
ENSMUSG00000098308	misc_RNA	Gm27782	ENSMUST00000185059	misc_RNA		15	1	62080245	199
ENSMUSG00000105537	miRNA	Gm47292	ENSMUST00000198501	miRNA		2	1	30367676	96
ENSMUSG00000093964	snoRNA	Gm26179	ENSMUST00000177723	snoRNA		6	1	74340950	132
ENSMUSG00000080626	miRNA	Mir1192	ENSMUST00000116976	miRNA		19	1	23149431	121
ENSMUSG00000089589	snoRNA	Gm23343	ENSMUST00000158964	snoRNA		15	1	44948104	143
ENSMUSG00000095759	protein_coding	Gm21828	ENSMUST00000178050	protein_coding	principal1	Y	-1	13223928	543
ENSMUSG00000055872	pseudogene	Gm9985	ENSMUST00000044101	pseudogene		10	-1	75590653	510
ENSMUSG00000089512	snoRNA	Gm26287	ENSMUST00000158887	snoRNA		1	1	59704258	81
ENSMUSG00000099334	snoRNA	Gm26379	ENSMUST00000178125	snoRNA		4	1	74635214	138
ENSMUSG00000093893	rRNA	n-R5s124	ENSMUST00000180334	rRNA		8	-1	123579568	119
ENSMUSG00000093834	snRNA	Rnu1b2	ENSMUST00000178073	snRNA		3	1	96374021	165
ENSMUSG00000077602	snoRNA	Gm22672	ENSMUST00000104414	snoRNA		16	1	24884173	134
ENSMUSG00000064596	snoRNA	Gm22298	ENSMUST00000082662	snoRNA		2	1	54100430	133
ENSMUSG00000095536	miRNA	Gm25285	ENSMUST00000178951	miRNA		2	1	10491336	90
ENSMUSG00000091743	processed_pseudogene	Gm5705	ENSMUST00000066241	processed_pseudogene		1	-1	162629067	711
ENSMUSG00000099203	miRNA	Mir6389	ENSMUST00000183661	miRNA		7	1	57581061	102
ENSMUSG00000079353	protein_coding	Gm11099	ENSMUST00000112589	protein_coding	principal1	2	1	58859434	117
ENSMUSG00000065442	miRNA	Mir20a	ENSMUST00000083508	miRNA		14	1	115044157	107
ENSMUSG00000096728	protein_coding	AC140325.4	ENSMUST00000178296	protein_coding		GL456354.1	1	158543	1446
ENSMUSG00000088898	misc_RNA	Gm22515	ENSMUST00000158273	misc_RNA		18	-1	40801465	305
ENSMUSG00000094452	snRNA	Gm22623	ENSMUST00000179244	snRNA		10	1	30493942	107
ENSMUSG00000088549	snRNA	Gm24959	ENSMUST00000157924	snRNA		18	-1	20844592	146
ENSMUSG00000065199	snRNA	Gm23461	ENSMUST00000083265	snRNA		X	1	72611803	107
ENSMUSG00000096310	snRNA	Gm23523	ENSMUST00000180190	snRNA		1	-1	170751823	107
ENSMUSG00000094883	snoRNA	Gm25121	ENSMUST00000179846	snoRNA		7	-1	59364574	79
ENSMUSG00000025218	protein_coding	Poll	ENSMUST00000026239	protein_coding	principal1	19	-1	45560531	2324
ENSMUSG00000084582	misc_RNA	Gm25178	ENSMUST00000122633	misc_RNA		6	1	88405977	325
ENSMUSG00000092894	miRNA	Gm23813	ENSMUST00000175153	miRNA		11	1	49771833	77
ENSMUSG00000089377	rRNA	Gm22135	ENSMUST00000158752	rRNA		19	-1	43160902	108
ENSMUSG00000076060	miRNA	Mir704	ENSMUST00000102106	miRNA		6	-1	47803652	77
ENSMUSG00000065579	miRNA	Mir425	ENSMUST00000083645	miRNA		9	1	108568777	85
ENSMUSG00000076255	miRNA	Mir92b	ENSMUST00000102300	miRNA		3	-1	89227198	83
ENSMUSG00000096161	snoRNA	Gm24639	ENSMUST00000178518	snoRNA		7	-1	59443709	79
ENSMUSG00000106347	miRNA	Mir5615-1	ENSMUST00000198896	miRNA		10	-1	81104673	60
ENSMUSG00000063897	protein_coding	CAAA01118383.1	ENSMUST00000077235	protein_coding		GL456216.1	1	15881	2173
ENSMUSG00000077767	snoRNA	Snora35	ENSMUST00000104579	snoRNA		X	1	146994381	128
ENSMUSG00000084425	snRNA	Gm25104	ENSMUST00000122476	snRNA		17	-1	37267238	163
ENSMUSG00000084456	snRNA	Gm24593	ENSMUST00000122507	snRNA		3	1	90548619	106
ENSMUSG00000090353	protein_coding	Gm17555	ENSMUST00000164042	protein_coding	principal1	2	1	126215100	1113
ENSMUSG00000095076	protein_coding	AC125178.2	ENSMUST00000177668	protein_coding		JH584298.1	1	179693	1215
ENSMUSG00000092908	miRNA	Gm25731	ENSMUST00000175167	miRNA		17	1	65509368	125
ENSMUSG00000088908	misc_RNA	Gm25433	ENSMUST00000158283	misc_RNA		9	1	80037429	286
ENSMUSG00000088222	snoRNA	Gm22599	ENSMUST00000157597	snoRNA		11	1	58661178	132
ENSMUSG00000088633	snoRNA	Gm22313	ENSMUST00000158008	snoRNA		2	1	97237818	129
ENSMUSG00000077357	snoRNA	Gm26289	ENSMUST00000104169	snoRNA		6	-1	50540034	131
ENSMUSG00000084557	snRNA	Gm25279	ENSMUST00000122608	snRNA		1	-1	151854955	133
ENSMUSG00000065439	miRNA	Mir140	ENSMUST00000083505	miRNA		8	1	107551244	70
ENSMUSG00000064666	snoRNA	Snora52	ENSMUST00000082732	snoRNA		7	1	141448803	137
ENSMUSG00000089227	misc_RNA	Gm25051	ENSMUST00000158602	misc_RNA		12	-1	46832807	249
ENSMUSG00000087747	snoRNA	Gm25151	ENSMUST00000157122	snoRNA		1	1	171308047	91
ENSMUSG00000099099	misc_RNA	Gm27337	ENSMUST00000184010	misc_RNA		15	1	102945359	69
ENSMUSG00000074026	processed_pseudogene	Gm6091	ENSMUST00000098307	processed_pseudogene		8	-1	126476412	165
ENSMUSG00000098446	miRNA	Mir7242	ENSMUST00000183710	miRNA		9	-1	67729577	79
ENSMUSG00000096112	miRNA	Gm26269	ENSMUST00000180144	miRNA		16	1	31982109	126
ENSMUSG00000065476	miRNA	Mir30b	ENSMUST00000083542	miRNA		15	-1	68337510	96
ENSMUSG00000094431	miRNA	CAAA01205117.1	ENSMUST00000180206	miRNA		GL456385.1	1	32719	100
ENSMUSG00000099024	misc_RNA	Gm27457	ENSMUST00000184771	misc_RNA		18	1	42574209	156
ENSMUSG00000087959	rRNA	Gm22562	ENSMUST00000157334	rRNA		17	-1	78534013	111
ENSMUSG00000095570	protein_coding	AC140325.3	ENSMUST00000179972	protein_coding		GL456354.1	-1	149659	1443
ENSMUSG00000095269	miRNA	Mir466b-8	ENSMUST00000103883	miRNA		2	1	10476628	86
ENSMUSG00000099005	miRNA	Mir6398	ENSMUST00000184541	miRNA		4	1	123616420	102
ENSMUSG00000098687	miRNA	Mir7k	ENSMUST00000184115	miRNA		5	-1	147283298	110
ENSMUSG00000105142	miRNA	Mir7214	ENSMUST00000198396	miRNA		17	-1	27317095	61
ENSMUSG00000075719	snRNA	Gm23741	ENSMUST00000097237	snRNA		7	1	4101890	171
ENSMUSG00000092767	miRNA	Gm23364	ENSMUST00000175026	miRNA		6	1	94823733	73
ENSMUSG00000089413	snRNA	Gm22013	ENSMUST00000158788	snRNA		13	-1	24486764	103
ENSMUSG00000105115	snoRNA	Rnu3b2	ENSMUST00000196353	snoRNA		11	1	87471368	216
ENSMUSG00000094834	miRNA	Gm25472	ENSMUST00000175454	miRNA		1	1	85763794	78
ENSMUSG00000064776	snoRNA	Gm25203	ENSMUST00000082842	snoRNA		12	-1	102253687	215
ENSMUSG00000093342	miRNA	Gm26119	ENSMUST00000175601	miRNA		18	-1	8698356	104
ENSMUSG00000084732	misc_RNA	Gm25807	ENSMUST00000122783	misc_RNA		10	-1	129172877	305
ENSMUSG00000088071	snRNA	Gm22818	ENSMUST00000157446	snRNA		15	-1	86212657	104
ENSMUSG00000099232	misc_RNA	Gm27884	ENSMUST00000183865	misc_RNA		7	-1	130527326	76
ENSMUSG00000065304	snoRNA	Gm23245	ENSMUST00000083370	snoRNA		5	1	129789539	135
ENSMUSG00000087737	rRNA	Gm24647	ENSMUST00000157112	rRNA		15	-1	91559783	113
ENSMUSG00000070110	miRNA	Mir504	ENSMUST00000093602	miRNA		X	-1	59097736	79
ENSMUSG00000098629	snRNA	Gm27975	ENSMUST00000184400	snRNA		7	-1	139199296	101
ENSMUSG00000095734	snoRNA	Gm23767	ENSMUST00000179278	snoRNA		7	-1	59708562	94
ENSMUSG00000096676	snRNA	Gm24517	ENSMUST00000122560	snRNA		1	-1	134280991	107
ENSMUSG00000064567	snoRNA	Gm24143	ENSMUST00000082633	snoRNA		11	-1	72616150	145
ENSMUSG00000089280	misc_RNA	Gm26025	ENSMUST00000158655	misc_RNA		11	1	57969342	271
ENSMUSG00000065649	snoRNA	Snora74a	ENSMUST00000083715	snoRNA		18	1	35557032	196
ENSMUSG00000077393	snoRNA	Gm24338	ENSMUST00000104205	snoRNA		9	1	101222952	127
ENSMUSG00000084628	misc_RNA	Gm22613	ENSMUST00000122679	misc_RNA		2	-1	127473308	292
ENSMUSG00000094183	snoRNA	Gm22622	ENSMUST00000082870	snoRNA		6	-1	59705874	129
ENSMUSG00000077403	snoRNA	Gm25419	ENSMUST00000104215	snoRNA		4	-1	55299845	191
ENSMUSG00000089123	snoRNA	Gm26404	ENSMUST00000158498	snoRNA		3	-1	37802652	109
ENSMUSG00000078034	miRNA	Gm24683	ENSMUST00000104840	miRNA		X	1	116123900	88
ENSMUSG00000088640	snRNA	Gm26482	ENSMUST00000158015	snRNA		7	1	55702154	62
ENSMUSG00000089128	snoRNA	Gm26406	ENSMUST00000158503	snoRNA		X	1	132507131	124
ENSMUSG00000084419	misc_RNA	Gm22275	ENSMUST00000122470	misc_RNA		11	1	53701179	310
ENSMUSG00000084665	snRNA	Gm23214	ENSMUST00000122716	snRNA		3	1	33011958	157
ENSMUSG00000084747	miRNA	Mir1899	ENSMUST00000122798	miRNA		9	1	8246786	96
ENSMUSG00000099273	miRNA	Gm27452	ENSMUST00000184920	miRNA		4	1	80967444	96
ENSMUSG00000077194	snRNA	Gm23431	ENSMUST00000104006	snRNA		7	-1	62036737	107
ENSMUSG00000089155	snoRNA	Gm23582	ENSMUST00000158530	snoRNA		11	-1	21249560	139
ENSMUSG00000096353	snoRNA	Gm24957	ENSMUST00000179604	snoRNA		9	1	112522529	132
ENSMUSG00000095590	snRNA	Gm24305	ENSMUST00000179155	snRNA		12	-1	54734718	164
ENSMUSG00000065792	snRNA	Gm25515	ENSMUST00000083858	snRNA		10	1	4104313	157
ENSMUSG00000093207	miRNA	Gm22414	ENSMUST00000175466	miRNA		7	-1	18017352	101
ENSMUSG00000065437	miRNA	Mir30d	ENSMUST00000083503	miRNA		15	-1	68341289	82
ENSMUSG00000093168	miRNA	Gm22990	ENSMUST00000175427	miRNA		11	-1	21564649	89
ENSMUSG00000064620	snoRNA	Gm22303	ENSMUST00000082686	snoRNA		12	1	16939994	122
ENSMUSG00000098797	miRNA	Mir6344	ENSMUST00000183462	miRNA		1	1	82131916	104
ENSMUSG00000080374	miRNA	Gm22953	ENSMUST00000116724	miRNA		2	-1	121450770	101
ENSMUSG00000099173	misc_RNA	Gm27985	ENSMUST00000185112	misc_RNA		6	1	52262592	378
ENSMUSG00000089241	misc_RNA	Gm24057	ENSMUST00000158616	misc_RNA		14	-1	31537258	302
ENSMUSG00000065869	snRNA	Gm24917	ENSMUST00000083935	snRNA		11	1	22868901	104
ENSMUSG00000064416	snRNA	Gm22248	ENSMUST00000082482	snRNA		X	1	151384494	150
ENSMUSG00000094753	snoRNA	Gm25017	ENSMUST00000179805	snoRNA		7	-1	59602725	79
ENSMUSG00000077590	snoRNA	Gm26015	ENSMUST00000104402	snoRNA		12	-1	65405970	125
ENSMUSG00000080500	miRNA	Gm22072	ENSMUST00000116850	miRNA		2	1	10465287	121
ENSMUSG00000087949	snRNA	Gm24251	ENSMUST00000157324	snRNA		1	-1	53886941	114
ENSMUSG00000064871	snoRNA	Snord58b	ENSMUST00000082937	snoRNA		18	1	75001058	66
ENSMUSG00000077689	snoRNA	Gm22499	ENSMUST00000104501	snoRNA		14	1	18814169	135
ENSMUSG00000098626	misc_RNA	Gm27972	ENSMUST00000184720	misc_RNA		14	1	61648638	137
ENSMUSG00000099172	miRNA	Mir3620	ENSMUST00000184710	miRNA		X	-1	150547445	61
ENSMUSG00000099174	miRNA	Mir6406	ENSMUST00000183592	miRNA		11	1	68220892	120
ENSMUSG00000076251	miRNA	Mir501	ENSMUST00000102296	miRNA		X	-1	7241351	109
ENSMUSG00000064485	snRNA	Gm23735	ENSMUST00000082551	snRNA		14	1	72131088	134
ENSMUSG00000089488	misc_RNA	Gm24733	ENSMUST00000158863	misc_RNA		13	-1	99040650	253
ENSMUSG00000098759	miRNA	Mir7063	ENSMUST00000184158	miRNA		7	1	141620701	91
ENSMUSG00000065382	snRNA	Gm23097	ENSMUST00000083448	snRNA		9	-1	6706446	105
ENSMUSG00000087916	snoRNA	Gm24912	ENSMUST00000157291	snoRNA		14	-1	20200112	117
ENSMUSG00000087765	snoRNA	Gm23985	ENSMUST00000157140	snoRNA		X	-1	113878454	124
ENSMUSG00000088090	rRNA	Gm23668	ENSMUST00000157465	rRNA		9	-1	60042179	111
ENSMUSG00000089310	snoRNA	Gm23181	ENSMUST00000158685	snoRNA		1	-1	95040043	110
ENSMUSG00000084511	misc_RNA	Gm22481	ENSMUST00000122562	misc_RNA		16	1	22595029	192
ENSMUSG00000095892	snRNA	Rnu5g	ENSMUST00000093721	snRNA		9	-1	65201841	116
ENSMUSG00000065647	snoRNA	Gm25896	ENSMUST00000083713	snoRNA		16	-1	87419044	136
ENSMUSG00000096061	miRNA	Gm23681	ENSMUST00000178821	miRNA		11	-1	20937701	126
ENSMUSG00000077561	snoRNA	Gm24607	ENSMUST00000104373	snoRNA		4	1	22396570	133
ENSMUSG00000088210	snRNA	Gm22084	ENSMUST00000157585	snRNA		5	-1	75372145	105
ENSMUSG00000077367	snRNA	Gm23483	ENSMUST00000104179	snRNA		16	-1	5060882	108
ENSMUSG00000088574	misc_RNA	Gm24534	ENSMUST00000157949	misc_RNA		2	-1	8472384	291
ENSMUSG00000095087	snRNA	Gm25328	ENSMUST00000175013	snRNA		14	1	20701523	107
ENSMUSG00000077021	miRNA	Mir467d	ENSMUST00000103833	miRNA		2	1	10507630	85
ENSMUSG00000096159	snoRNA	Gm24153	ENSMUST00000179280	snoRNA		7	-1	59683679	94
ENSMUSG00000077648	snoRNA	Gm24988	ENSMUST00000104460	snoRNA		1	-1	160876322	121
ENSMUSG00000098589	miRNA	Gm27353	ENSMUST00000184712	miRNA		9	1	73005201	122
ENSMUSG00000094184	miRNA	Mir743b	ENSMUST00000104751	miRNA		X	-1	66777332	77
ENSMUSG00000087732	snRNA	Gm24651	ENSMUST00000157107	snRNA		16	-1	47506425	107
ENSMUSG00000077345	snoRNA	Snord70	ENSMUST00000104157	snoRNA		1	1	59691934	87
ENSMUSG00000088444	snoRNA	Gm22187	ENSMUST00000157819	snoRNA		2	1	151059955	129
ENSMUSG00000084559	miRNA	Mir1906-2	ENSMUST00000122610	miRNA		X	-1	88759553	80
ENSMUSG00000092674	misc_RNA	Gm24105	ENSMUST00000174933	misc_RNA		5	-1	149248244	293
ENSMUSG00000098608	miRNA	Mir6981	ENSMUST00000184293	miRNA		18	-1	37974617	115
ENSMUSG00000105932	miRNA	Mir6925	ENSMUST00000197857	miRNA		11	1	70705990	70
ENSMUSG00000093176	miRNA	Mir5119	ENSMUST00000175435	miRNA		11	1	98262606	57
ENSMUSG00000065924	snoRNA	Gm22797	ENSMUST00000083990	snoRNA		16	1	71663788	131
ENSMUSG00000088914	snRNA	Gm22605	ENSMUST00000158289	snRNA		4	-1	92866582	108
ENSMUSG00000070101	miRNA	Mir341	ENSMUST00000093593	miRNA		12	1	109611500	96
ENSMUSG00000065694	snRNA	Gm25411	ENSMUST00000083760	snRNA		1	1	66436082	151
ENSMUSG00000065852	snoRNA	Gm22353	ENSMUST00000083918	snoRNA		15	1	38058285	136
ENSMUSG00000065463	snoRNA	Snord45c	ENSMUST00000083529	snoRNA		3	-1	153912204	80
ENSMUSG00000098521	miRNA	Mir7243	ENSMUST00000184048	miRNA		9	-1	102304975	52
ENSMUSG00000096821	snoRNA	Gm24570	ENSMUST00000180314	snoRNA		7	-1	59572785	79
ENSMUSG00000098480	miRNA	Mir6387	ENSMUST00000184042	miRNA		12	-1	15801101	108
ENSMUSG00000065718	snRNA	Gm25650	ENSMUST00000083784	snRNA		10	-1	46838507	162
ENSMUSG00000098527	miRNA	Mir6961	ENSMUST00000183874	miRNA		15	-1	100649229	67
ENSMUSG00000092659	miRNA	Mir3100	ENSMUST00000174918	miRNA		7	1	19086828	65
ENSMUSG00000094599	snoRNA	Snord116l3	ENSMUST00000178370	snoRNA		7	-1	59892204	94
ENSMUSG00000094959	miRNA	Gm24112	ENSMUST00000179159	miRNA		4	-1	40850226	83
ENSMUSG00000076212	miRNA	Mir680-1	ENSMUST00000102257	miRNA		6	1	129691535	109
ENSMUSG00000098264	miRNA	Mir6414	ENSMUST00000183685	miRNA		5	1	41891342	82
ENSMUSG00000077174	snoRNA	Gm25757	ENSMUST00000103986	snoRNA		3	1	153831170	123
ENSMUSG00000087917	snoRNA	Gm24911	ENSMUST00000157292	snoRNA		6	-1	67804510	136
ENSMUSG00000070071	miRNA	Mir465	ENSMUST00000093563	miRNA		X	-1	66839125	74
ENSMUSG00000077745	snoRNA	Gm26342	ENSMUST00000104557	snoRNA		1	1	67257224	129
ENSMUSG00000098989	miRNA	Mir7223	ENSMUST00000183433	miRNA		11	1	107996848	69
ENSMUSG00000065919	snRNA	Gm24449	ENSMUST00000083985	snRNA		12	-1	69586258	106
ENSMUSG00000065258	snoRNA	Gm23969	ENSMUST00000083324	snoRNA		2	1	26911261	74
ENSMUSG00000088732	misc_RNA	Gm23894	ENSMUST00000158107	misc_RNA		18	1	43761151	313
ENSMUSG00000094522	snoRNA	Gm22912	ENSMUST00000178242	snoRNA		7	-1	59612083	79
ENSMUSG00000099082	miRNA	Mir7036b	ENSMUST00000184791	miRNA		5	1	34574151	63
ENSMUSG00000070063	snoRNA	Snora33	ENSMUST00000093556	snoRNA		10	-1	23785475	129
ENSMUSG00000094310	miRNA	Gm23243	ENSMUST00000180047	miRNA		5	1	12940370	110
ENSMUSG00000098499	miRNA	Mir6975	ENSMUST00000184879	miRNA		17	1	35244075	61
ENSMUSG00000077433	snRNA	Gm22593	ENSMUST00000104245	snRNA		17	-1	94328863	109
ENSMUSG00000065574	miRNA	Mir203	ENSMUST00000083640	miRNA		12	1	112130880	76
ENSMUSG00000064652	snoRNA	Gm24165	ENSMUST00000082718	snoRNA		2	1	32831989	128
ENSMUSG00000092746	misc_RNA	Rn7s6	ENSMUST00000175005	misc_RNA		6	1	69516339	291
ENSMUSG00000093260	miRNA	Gm23415	ENSMUST00000175519	miRNA		13	-1	10592566	83
ENSMUSG00000105841	miRNA	Mir3960	ENSMUST00000198213	miRNA		2	-1	32712972	73
ENSMUSG00000095966	rRNA	n-R5s105	ENSMUST00000178499	rRNA		8	-1	123547383	119
ENSMUSG00000089034	snoRNA	Gm22156	ENSMUST00000158409	snoRNA		11	1	12676933	141
ENSMUSG00000094239	snoRNA	Gm24079	ENSMUST00000104352	snoRNA		5	-1	62523539	132
ENSMUSG00000065226	snoRNA	Gm25791	ENSMUST00000083292	snoRNA		9	1	15314845	137
ENSMUSG00000093180	miRNA	Gm25690	ENSMUST00000175439	miRNA		4	1	141346164	77
ENSMUSG00000088500	misc_RNA	Gm24419	ENSMUST00000157875	misc_RNA		4	-1	18730548	332
ENSMUSG00000088268	snRNA	Gm24776	ENSMUST00000157643	snRNA		5	-1	72971264	86
ENSMUSG00000064545	snoRNA	Gm22981	ENSMUST00000082611	snoRNA		12	1	109682384	75
ENSMUSG00000077456	snoRNA	Gm22927	ENSMUST00000104268	snoRNA		11	-1	71848206	131
ENSMUSG00000064689	snRNA	Gm25815	ENSMUST00000082755	snRNA		7	-1	16953501	107
ENSMUSG00000077603	snoRNA	Gm22673	ENSMUST00000104415	snoRNA		12	1	59672990	131
ENSMUSG00000087954	snoRNA	Gm22559	ENSMUST00000157329	snoRNA		5	1	64144248	134
ENSMUSG00000088523	rRNA	Gm26089	ENSMUST00000157898	rRNA		8	1	44601833	107
ENSMUSG00000064707	snRNA	Gm22507	ENSMUST00000082773	snRNA		10	1	112931424	160
ENSMUSG00000093368	miRNA	Gm22800	ENSMUST00000175627	miRNA		2	-1	118248782	94
ENSMUSG00000077283	rRNA	n-R5s158	ENSMUST00000104095	rRNA		7	-1	128774963	118
ENSMUSG00000093562	snoRNA	Gm23090	ENSMUST00000177331	snoRNA		4	-1	41213853	78
ENSMUSG00000098646	miRNA	Mir7084	ENSMUST00000183876	miRNA		9	-1	22114013	70
ENSMUSG00000088850	snoRNA	Gm24729	ENSMUST00000158225	snoRNA		1	1	66305889	137
ENSMUSG00000088656	snRNA	Gm24848	ENSMUST00000158031	snRNA		18	1	63584736	107
ENSMUSG00000094919	snoRNA	Gm26389	ENSMUST00000179819	snoRNA		7	-1	59432485	79
ENSMUSG00000065212	snRNA	Gm26264	ENSMUST00000083278	snRNA		6	1	81638311	159
ENSMUSG00000089271	snRNA	Gm24552	ENSMUST00000158646	snRNA		7	1	91242995	103
ENSMUSG00000065691	rRNA	n-R5s77	ENSMUST00000083757	rRNA		10	1	78314165	119
ENSMUSG00000088317	misc_RNA	Gm26185	ENSMUST00000157692	misc_RNA		9	1	106636318	266
ENSMUSG00000098701	miRNA	Mir6914	ENSMUST00000184999	miRNA		10	1	128382838	69
ENSMUSG00000098671	miRNA	Mir7075	ENSMUST00000184187	miRNA		8	-1	107096106	82
ENSMUSG00000088935	snRNA	Gm25924	ENSMUST00000158310	snRNA		7	-1	121024462	103
ENSMUSG00000088436	snRNA	Gm25382	ENSMUST00000157811	snRNA		10	1	17116804	97
ENSMUSG00000065864	snoRNA	Gm24031	ENSMUST00000083930	snoRNA		14	1	26497655	131
ENSMUSG00000088653	snRNA	Gm24851	ENSMUST00000158028	snRNA		3	1	53843407	103
ENSMUSG00000098624	miRNA	Mir7036	ENSMUST00000184197	miRNA		5	-1	137296688	65
ENSMUSG00000095541	miRNA	Gm24617	ENSMUST00000116705	miRNA		18	1	46367365	121
ENSMUSG00000077794	snRNA	Gm25560	ENSMUST00000104606	snRNA		1	1	175800514	176
ENSMUSG00000088738	snRNA	Gm27579	ENSMUST00000158113	snRNA		4	1	96916945	63
ENSMUSG00000104879	miRNA	Gm44490	ENSMUST00000198566	miRNA		X	1	41948832	127
ENSMUSG00000094850	snRNA	Gm24319	ENSMUST00000083389	snRNA		19	1	15680004	107
ENSMUSG00000095828	snoRNA	Gm25449	ENSMUST00000179389	snoRNA		7	-1	59419401	79
ENSMUSG00000089276	misc_RNA	Gm24545	ENSMUST00000158651	misc_RNA		1	1	59626580	85
ENSMUSG00000096281	snoRNA	Gm22255	ENSMUST00000177933	snoRNA		7	-1	59511012	79
ENSMUSG00000099317	misc_RNA	Gm27610	ENSMUST00000184026	misc_RNA		17	1	85614662	74
ENSMUSG00000088989	snRNA	Gm25605	ENSMUST00000158364	snRNA		13	1	20844754	124
ENSMUSG00000077667	snoRNA	Gm26147	ENSMUST00000104479	snoRNA		7	1	118832565	114
ENSMUSG00000064796	misc_RNA	Terc	ENSMUST00000082862	misc_RNA		3	-1	96414859	423
ENSMUSG00000106400	miRNA	Mir216c	ENSMUST00000196334	miRNA		11	-1	28746266	69
ENSMUSG00000094297	miRNA	Mir669k	ENSMUST00000177742	miRNA		2	1	10475300	127
ENSMUSG00000084492	rRNA	n-R5s157	ENSMUST00000122543	rRNA		7	-1	116625242	121
ENSMUSG00000077454	snRNA	Gm25918	ENSMUST00000104266	snRNA		5	1	34162324	103
ENSMUSG00000077465	snoRNA	Gm26423	ENSMUST00000104277	snoRNA		9	1	89158999	128
ENSMUSG00000077758	snoRNA	Gm23527	ENSMUST00000104570	snoRNA		6	-1	116372068	130
ENSMUSG00000064393	snRNA	Gm23627	ENSMUST00000082459	snRNA		8	-1	110421467	107
ENSMUSG00000093645	snoRNA	Gm23187	ENSMUST00000175746	snoRNA		2	1	130277195	86
ENSMUSG00000099091	miRNA	Mir7003	ENSMUST00000184607	miRNA		2	1	163068090	66
ENSMUSG00000092693	miRNA	Gm22923	ENSMUST00000174952	miRNA		16	1	75764322	110
ENSMUSG00000080405	miRNA	Gm23651	ENSMUST00000116755	miRNA		2	1	10482812	120
ENSMUSG00000098998	misc_RNA	Gm27913	ENSMUST00000184473	misc_RNA		15	1	62038029	173
ENSMUSG00000077127	miRNA	Mir743	ENSMUST00000103939	miRNA		X	-1	66776818	62
ENSMUSG00000076323	miRNA	Gm26339	ENSMUST00000102368	miRNA		19	1	42274964	99
ENSMUSG00000065749	snoRNA	AF357428	ENSMUST00000083815	snoRNA		12	1	109679945	69
ENSMUSG00000084603	misc_RNA	Gm22204	ENSMUST00000122654	misc_RNA		8	1	3615529	327
ENSMUSG00000088121	snRNA	Gm25721	ENSMUST00000157496	snRNA		5	1	103658237	171
ENSMUSG00000098425	snoRNA	Gm24949	ENSMUST00000183609	snoRNA		11	1	96032678	215
ENSMUSG00000064549	snRNA	Gm22977	ENSMUST00000082615	snRNA		16	1	54972431	107
ENSMUSG00000088108	snoRNA	Snora47	ENSMUST00000157483	snoRNA		13	1	95330600	138
ENSMUSG00000093258	snRNA	Gm22929	ENSMUST00000175517	snRNA		5	-1	66164662	107
ENSMUSG00000070102	miRNA	Mir455	ENSMUST00000093594	miRNA		4	1	63256851	82
ENSMUSG00000089320	snoRNA	Gm25976	ENSMUST00000158695	snoRNA		15	1	20184832	130
ENSMUSG00000098363	miRNA	Mir6993	ENSMUST00000184912	miRNA		19	1	10191375	65
ENSMUSG00000088015	miRNA	Mir1932	ENSMUST00000157390	miRNA		11	1	119390472	90
ENSMUSG00000087730	snRNA	Gm24650	ENSMUST00000157105	snRNA		4	-1	41172844	103
ENSMUSG00000094521	snRNA	Gm22911	ENSMUST00000177920	snRNA		10	-1	38615481	107
ENSMUSG00000064775	snRNA	Gm25205	ENSMUST00000082841	snRNA		6	1	64413648	103
ENSMUSG00000099049	rRNA	Gm27289	ENSMUST00000183341	rRNA		9	-1	96495213	82
ENSMUSG00000098751	miRNA	Mir7672	ENSMUST00000184349	miRNA		14	-1	26669608	62
ENSMUSG00000064829	snoRNA	Gm22879	ENSMUST00000082895	snoRNA		2	1	26912218	74
ENSMUSG00000092862	miRNA	Mir3094	ENSMUST00000175121	miRNA		4	1	40993695	64
ENSMUSG00000089065	misc_RNA	Gm24363	ENSMUST00000158440	misc_RNA		4	-1	105975885	311
ENSMUSG00000084566	misc_RNA	Gm26477	ENSMUST00000122617	misc_RNA		12	1	90981225	323
ENSMUSG00000089217	misc_RNA	Gm23385	ENSMUST00000158592	misc_RNA		X	1	50022621	295
ENSMUSG00000094917	snoRNA	Gm26390	ENSMUST00000179628	snoRNA		7	-1	59485026	79
ENSMUSG00000065444	miRNA	Mir27a	ENSMUST00000083510	miRNA		8	1	84208672	87
ENSMUSG00000084444	rRNA	n-R5s32	ENSMUST00000122495	rRNA		16	-1	30141945	103
ENSMUSG00000088299	misc_RNA	Gm26414	ENSMUST00000157674	misc_RNA		7	1	122446858	269
ENSMUSG00000077380	snoRNA	Gm22661	ENSMUST00000104192	snoRNA		13	1	95332618	132
ENSMUSG00000065220	snRNA	Gm25794	ENSMUST00000083286	snRNA		10	-1	79703590	107
ENSMUSG00000088865	misc_RNA	Gm23069	ENSMUST00000158240	misc_RNA		6	-1	141715091	311
ENSMUSG00000088699	miRNA	Gm22328	ENSMUST00000158074	miRNA		6	-1	99484702	112
ENSMUSG00000084675	snRNA	Gm26026	ENSMUST00000122726	snRNA		19	-1	14718480	123
ENSMUSG00000064527	misc_RNA	Gm26438	ENSMUST00000082593	misc_RNA		18	1	73611516	107
ENSMUSG00000088371	rRNA	Gm25180	ENSMUST00000157746	rRNA		1	1	89563360	115
ENSMUSG00000075833	snRNA	Gm22003	ENSMUST00000101885	snRNA		12	1	4758547	107
ENSMUSG00000106440	miRNA	Gm44466	ENSMUST00000200264	miRNA		13	1	21833093	138
ENSMUSG00000065734	snoRNA	Snord49a	ENSMUST00000083800	snoRNA		11	1	62603450	72
ENSMUSG00000093264	miRNA	Gm23419	ENSMUST00000175523	miRNA		11	-1	120346819	84
ENSMUSG00000070249	snRNA	Gm23520	ENSMUST00000093736	snRNA		11	-1	38798277	107
ENSMUSG00000096587	miRNA	Mir467a-6	ENSMUST00000177790	miRNA		2	1	10491048	83
ENSMUSG00000064591	snRNA	Gm22302	ENSMUST00000082657	snRNA		7	-1	37824347	106
ENSMUSG00000084664	misc_RNA	Gm23213	ENSMUST00000122715	misc_RNA		12	1	61867056	313
ENSMUSG00000077178	snoRNA	Gm25756	ENSMUST00000103990	snoRNA		5	1	78779859	136
ENSMUSG00000077176	snoRNA	Gm25759	ENSMUST00000103988	snoRNA		7	1	124146281	129
ENSMUSG00000092781	miRNA	Mir3057	ENSMUST00000175040	miRNA		10	1	81271597	91
ENSMUSG00000096190	snoRNA	Snord116l6	ENSMUST00000179955	snoRNA		7	-1	59884592	94
ENSMUSG00000094251	snoRNA	Gm25632	ENSMUST00000083112	snoRNA		2	1	32225653	85
ENSMUSG00000106368	miRNA	Gm44453	ENSMUST00000175161	miRNA		9	1	32067171	126
ENSMUSG00000099183	miRNA	Gm27881	ENSMUST00000183805	miRNA		1	1	13262198	82
ENSMUSG00000092829	miRNA	Gm23159	ENSMUST00000175088	miRNA		4	-1	76958498	77
ENSMUSG00000077735	snoRNA	Gm24556	ENSMUST00000104547	snoRNA		5	-1	147200253	130
ENSMUSG00000088161	misc_RNA	Gm23537	ENSMUST00000157536	misc_RNA		1	1	104485957	330
ENSMUSG00000093167	miRNA	Mir5131	ENSMUST00000175426	miRNA		14	-1	45658053	93
ENSMUSG00000087919	snoRNA	Gm24908	ENSMUST00000157294	snoRNA		4	1	14239618	127
ENSMUSG00000084465	rRNA	n-R5s47	ENSMUST00000122516	rRNA		14	1	62869714	119
ENSMUSG00000092738	miRNA	Mir5135	ENSMUST00000174997	miRNA		12	-1	76533212	79
ENSMUSG00000077607	snoRNA	Gm25803	ENSMUST00000104419	snoRNA		4	-1	81338404	131
ENSMUSG00000104758	miRNA	Mir691	ENSMUST00000199719	miRNA		16	-1	74342067	78
ENSMUSG00000089148	misc_RNA	Gm23408	ENSMUST00000158523	misc_RNA		8	-1	91185183	265
ENSMUSG00000089389	scaRNA	Gm24682	ENSMUST00000158764	scaRNA		5	1	123518231	137
ENSMUSG00000088663	snRNA	Gm25332	ENSMUST00000158038	snRNA		X	1	92882451	105
ENSMUSG00000065488	miRNA	Mir196a-2	ENSMUST00000083554	miRNA		15	1	102973350	85
ENSMUSG00000064377	snoRNA	Gm24966	ENSMUST00000082443	snoRNA		7	-1	59344151	79
ENSMUSG00000065538	miRNA	Mir153	ENSMUST00000083604	miRNA		12	1	117250817	69
ENSMUSG00000095939	snRNA	Gm25702	ENSMUST00000158203	snRNA		15	-1	63481276	63
ENSMUSG00000095305	snRNA	Gm23790	ENSMUST00000083013	snRNA		10	-1	31163632	107
ENSMUSG00000093408	miRNA	Mir5617	ENSMUST00000176786	miRNA		X	-1	20863182	57
ENSMUSG00000098733	miRNA	Gm27833	ENSMUST00000184285	miRNA		16	-1	96040968	124
ENSMUSG00000098266	miRNA	Gm27516	ENSMUST00000184237	miRNA		13	-1	31626543	98
ENSMUSG00000096130	miRNA	Gm25144	ENSMUST00000179561	miRNA		3	1	5885595	110
ENSMUSG00000077598	snRNA	Gm26011	ENSMUST00000104410	snRNA		6	-1	96560864	104
ENSMUSG00000093119	miRNA	Gm25640	ENSMUST00000175378	miRNA		9	-1	64971793	125
ENSMUSG00000088218	snRNA	Gm22078	ENSMUST00000157593	snRNA		3	-1	146387844	103
ENSMUSG00000088674	misc_RNA	Gm22803	ENSMUST00000158049	misc_RNA		10	1	62919559	283
ENSMUSG00000088438	snoRNA	Gm25387	ENSMUST00000157813	snoRNA		11	-1	27318978	132
ENSMUSG00000106611	miRNA	Gm22048	ENSMUST00000104721	miRNA		5	1	81735927	89
ENSMUSG00000088608	rRNA	Gm24186	ENSMUST00000157983	rRNA		10	-1	94821655	127
ENSMUSG00000088842	misc_RNA	Gm26356	ENSMUST00000158217	misc_RNA		5	-1	25188643	283
ENSMUSG00000096694	miRNA	Gm23190	ENSMUST00000180307	miRNA		12	-1	116242567	64
ENSMUSG00000094454	rRNA	Gm22624	ENSMUST00000179913	rRNA		Y	-1	83812695	108
ENSMUSG00000084462	rRNA	n-R5s154	ENSMUST00000122513	rRNA		7	-1	82754979	108
ENSMUSG00000077555	snoRNA	Gm23708	ENSMUST00000104367	snoRNA		5	-1	60717439	123
ENSMUSG00000093203	miRNA	Gm22411	ENSMUST00000175462	miRNA		2	1	127891988	126
ENSMUSG00000080635	miRNA	Gm25509	ENSMUST00000116985	miRNA		18	-1	72899987	106
ENSMUSG00000089462	misc_RNA	Gm23149	ENSMUST00000158837	misc_RNA		2	-1	78550737	230
ENSMUSG00000094550	snoRNA	Gm22393	ENSMUST00000180153	snoRNA		7	-1	59441840	79
ENSMUSG00000077449	snoRNA	Gm23127	ENSMUST00000104261	snoRNA		13	1	75768068	130
ENSMUSG00000088195	snRNA	Gm23901	ENSMUST00000157570	snRNA		X	-1	162850264	107
ENSMUSG00000105165	miRNA	Mir7686	ENSMUST00000200604	miRNA		7	-1	139957622	57
ENSMUSG00000092815	miRNA	Mir3099	ENSMUST00000175074	miRNA		7	1	6803587	84
ENSMUSG00000104933	miRNA	Mir466e	ENSMUST00000198862	miRNA		2	1	10479088	84
ENSMUSG00000089458	snoRNA	Gm24221	ENSMUST00000158833	snoRNA		2	1	148151150	313
ENSMUSG00000098853	snRNA	Gm27393	ENSMUST00000157263	snRNA		11	-1	7886505	62
ENSMUSG00000094382	snoRNA	Gm22192	ENSMUST00000175128	snoRNA		2	1	32221970	85
ENSMUSG00000094897	snRNA	Gm22288	ENSMUST00000179904	snRNA		X	1	50405813	107
ENSMUSG00000076445	miRNA	Gm24865	ENSMUST00000103246	miRNA		7	-1	25828727	96
ENSMUSG00000064743	snRNA	Gm24856	ENSMUST00000082809	snRNA		11	-1	93413324	107
ENSMUSG00000096771	snoRNA	Gm22115	ENSMUST00000103976	snoRNA		13	-1	8950053	133
ENSMUSG00000094377	snRNA	Gm24407	ENSMUST00000177864	snRNA		5	1	115490254	141
ENSMUSG00000092917	miRNA	Mir3472	ENSMUST00000175176	miRNA		X	1	145039344	71
ENSMUSG00000104757	miRNA	Gm44391	ENSMUST00000198490	miRNA		8	-1	67629106	93
ENSMUSG00000077516	rRNA	n-R5s219	ENSMUST00000104328	rRNA		1	1	149841530	132
ENSMUSG00000092997	miRNA	Gm23917	ENSMUST00000175256	miRNA		7	-1	61733782	98
ENSMUSG00000093082	miRNA	Gm24322	ENSMUST00000175341	miRNA		5	-1	90796255	70
ENSMUSG00000089219	miRNA	Mir1963	ENSMUST00000158594	miRNA		7	-1	29083694	59
ENSMUSG00000080615	snoRNA	Snord99	ENSMUST00000116965	snoRNA		4	1	132310691	74
ENSMUSG00000077239	snoRNA	Snord66	ENSMUST00000104051	snoRNA		16	1	20684239	75
ENSMUSG00000088171	snRNA	Gm25220	ENSMUST00000157546	snRNA		2	1	25339651	95
ENSMUSG00000092737	miRNA	Gm24022	ENSMUST00000174996	miRNA		12	-1	113424788	70
ENSMUSG00000077815	miRNA	Mir290a	ENSMUST00000104627	miRNA		7	1	3218626	83
ENSMUSG00000095160	miRNA	Gm25548	ENSMUST00000178681	miRNA		16	-1	35440363	110
ENSMUSG00000098946	misc_RNA	Gm27636	ENSMUST00000184528	misc_RNA		2	-1	105123183	122
ENSMUSG00000077366	snoRNA	Gm23484	ENSMUST00000104178	snoRNA		3	-1	69962445	131
ENSMUSG00000087940	snoRNA	Gm24246	ENSMUST00000157315	snoRNA		18	1	28309760	132
ENSMUSG00000088598	snoRNA	Gm24599	ENSMUST00000157973	snoRNA		19	-1	11607438	50
ENSMUSG00000093134	miRNA	Gm25996	ENSMUST00000175393	miRNA		16	1	43797417	117
ENSMUSG00000095314	snoRNA	Gm25462	ENSMUST00000177833	snoRNA		7	-1	59498119	79
ENSMUSG00000104566	miRNA	Mir7227	ENSMUST00000200408	miRNA		4	-1	133717108	59
ENSMUSG00000098500	miRNA	Mir6396	ENSMUST00000183603	miRNA		8	-1	122622375	111
ENSMUSG00000077138	miRNA	Gm23577	ENSMUST00000103950	miRNA		7	-1	4580178	110
ENSMUSG00000076983	miRNA	Mir297a-2	ENSMUST00000103795	miRNA		2	1	10472254	90
ENSMUSG00000064675	snRNA	Gm22810	ENSMUST00000082741	snRNA		15	-1	24820702	158
ENSMUSG00000064566	snRNA	Gm24144	ENSMUST00000082632	snRNA		15	1	8220004	111
ENSMUSG00000076453	miRNA	Mir759	ENSMUST00000103254	miRNA		14	1	79738431	98
ENSMUSG00000098537	misc_RNA	Gm27867	ENSMUST00000184778	misc_RNA		6	1	52158432	125
ENSMUSG00000077463	snoRNA	Gm26418	ENSMUST00000104275	snoRNA		1	-1	24548977	137
ENSMUSG00000092751	miRNA	Mir3080	ENSMUST00000175010	miRNA		15	-1	82959296	79
ENSMUSG00000095290	miRNA	Gm24196	ENSMUST00000179161	miRNA		5	-1	8203975	110
ENSMUSG00000098560	miRNA	Gm27530	ENSMUST00000184096	miRNA		8	-1	121084706	98
ENSMUSG00000077872	miRNA	Mir878	ENSMUST00000104680	miRNA		X	-1	66801585	78
ENSMUSG00000077146	snoRNA	Gm22939	ENSMUST00000103958	snoRNA		6	1	43887194	131
ENSMUSG00000094290	miRNA	Gm27512	ENSMUST00000175328	miRNA		1	1	63198031	126
ENSMUSG00000098613	miRNA	Mir6931	ENSMUST00000184841	miRNA		11	-1	102999921	74
ENSMUSG00000106470	miRNA	Mir7055	ENSMUST00000197423	miRNA		7	1	45173303	59
ENSMUSG00000089002	snoRNA	Gm23855	ENSMUST00000158377	snoRNA		13	1	62384918	135
ENSMUSG00000076361	miRNA	Mir182	ENSMUST00000102406	miRNA		6	-1	30165992	75
ENSMUSG00000095361	snRNA	Gm24967	ENSMUST00000179791	snRNA		4	-1	108467050	107
ENSMUSG00000080384	snRNA	Gm22105	ENSMUST00000116734	snRNA		10	1	39749317	116
ENSMUSG00000106465	miRNA	Mir374c	ENSMUST00000197862	miRNA		X	1	103573085	49
ENSMUSG00000098953	misc_RNA	Gm27348	ENSMUST00000184511	misc_RNA		2	-1	40598543	170
ENSMUSG00000088958	scaRNA	Scarna8	ENSMUST00000158333	scaRNA		4	-1	86586583	131
ENSMUSG00000077453	snoRNA	Gm25915	ENSMUST00000104265	snoRNA		X	-1	142485447	126
ENSMUSG00000105805	miRNA	Gm44498	ENSMUST00000199509	miRNA		9	-1	18098262	111
ENSMUSG00000088940	misc_RNA	Gm24930	ENSMUST00000158315	misc_RNA		19	-1	38473202	83
ENSMUSG00000077095	miRNA	Gm24342	ENSMUST00000103907	miRNA		2	1	10509584	104
ENSMUSG00000105951	miRNA	Gm44491	ENSMUST00000196794	miRNA		18	1	57681814	96
ENSMUSG00000089465	rRNA	Gm23702	ENSMUST00000158840	rRNA		9	1	34960019	130
ENSMUSG00000089381	snRNA	Gm24678	ENSMUST00000158756	snRNA		4	1	120903460	104
ENSMUSG00000091037	pseudogene	Gm17661	ENSMUST00000170317	pseudogene		2	1	90917643	270
ENSMUSG00000098536	misc_RNA	Gm27868	ENSMUST00000184680	misc_RNA		6	1	52162010	102
ENSMUSG00000093100	miRNA	Mir3971	ENSMUST00000175359	miRNA		11	1	75551429	83
ENSMUSG00000093169	miRNA	Mir3079	ENSMUST00000175428	miRNA		15	-1	76290968	90
ENSMUSG00000095376	rRNA	Gm22109	ENSMUST00000177995	rRNA		8	-1	123606731	119
ENSMUSG00000106312	miRNA	Gm44378	ENSMUST00000117001	miRNA		X	1	85588977	83
ENSMUSG00000106199	miRNA	Mir3967	ENSMUST00000198710	miRNA		2	1	22654283	68
ENSMUSG00000064424	snRNA	Gm22749	ENSMUST00000082490	snRNA		12	-1	101223698	107
ENSMUSG00000064387	snoRNA	Snora73a	ENSMUST00000082453	snoRNA		4	-1	132352979	205
ENSMUSG00000094077	miRNA	Gm22323	ENSMUST00000103832	miRNA		19	-1	13599768	109
ENSMUSG00000088797	misc_RNA	Gm22537	ENSMUST00000158172	misc_RNA		12	1	118753554	199
ENSMUSG00000089262	snoRNA	Gm22893	ENSMUST00000158637	snoRNA		6	1	85150336	116
ENSMUSG00000098787	miRNA	Mir7088	ENSMUST00000184227	miRNA		9	1	108081498	86
ENSMUSG00000098347	miRNA	Mir6339	ENSMUST00000185120	miRNA		2	-1	130016408	117
ENSMUSG00000105610	miRNA	Gm47313	ENSMUST00000197780	miRNA		3	-1	96245963	138
ENSMUSG00000088538	snoRNA	Gm23276	ENSMUST00000157913	snoRNA		14	-1	97336632	138
ENSMUSG00000099111	misc_RNA	Gm27369	ENSMUST00000185182	misc_RNA		18	1	38594158	71
ENSMUSG00000077290	snoRNA	Gm25407	ENSMUST00000104102	snoRNA		2	-1	157713801	134
ENSMUSG00000065215	snRNA	Gm26263	ENSMUST00000083281	snRNA		1	-1	77898446	164
ENSMUSG00000087989	snRNA	Gm22228	ENSMUST00000157364	snRNA		7	1	63585922	101
ENSMUSG00000094887	protein_coding	AC163611.2	ENSMUST00000179700	protein_coding		JH584299.1	1	587624	2515
ENSMUSG00000088739	snoRNA	Gm23891	ENSMUST00000158114	snoRNA		3	1	47200627	138
ENSMUSG00000091028	protein_coding	Gm10722	ENSMUST00000151376	protein_coding	principal1	9	1	3000922	651
ENSMUSG00000065158	snoRNA	Gm25483	ENSMUST00000083224	snoRNA		13	1	12589565	227
ENSMUSG00000064453	snoRNA	Snord21	ENSMUST00000082519	snoRNA		5	1	107904555	94
ENSMUSG00000093029	miRNA	Gm25306	ENSMUST00000175288	miRNA		5	-1	64647749	117
ENSMUSG00000098731	miRNA	Mir7027	ENSMUST00000183408	miRNA		5	1	114404468	72
ENSMUSG00000088403	misc_RNA	Gm25888	ENSMUST00000157778	misc_RNA		12	1	86809957	302
ENSMUSG00000105318	miRNA	Gm44480	ENSMUST00000199315	miRNA		X	1	24969994	86
ENSMUSG00000088454	snRNA	Gm26371	ENSMUST00000157829	snRNA		15	1	93344684	104
ENSMUSG00000096085	snRNA	Gm24465	ENSMUST00000178398	snRNA		1	1	98049822	107
ENSMUSG00000089614	scaRNA	Gm23505	ENSMUST00000158989	scaRNA		2	-1	51493782	130
ENSMUSG00000064686	snRNA	Gm25810	ENSMUST00000082752	snRNA		16	1	22224244	108
ENSMUSG00000065808	misc_RNA	Gm23037	ENSMUST00000083874	misc_RNA		17	1	46403875	324
ENSMUSG00000064472	snRNA	Gm23407	ENSMUST00000082538	snRNA		9	-1	55555712	91
ENSMUSG00000065612	miRNA	Mir151	ENSMUST00000083678	miRNA		15	-1	73254882	68
ENSMUSG00000087746	snRNA	Gm25150	ENSMUST00000157121	snRNA		18	-1	65907222	60
ENSMUSG00000095131	rRNA	n-R5s110	ENSMUST00000179995	rRNA		8	-1	123555881	119
ENSMUSG00000096451	snRNA	Gm22645	ENSMUST00000180010	snRNA		17	-1	25694220	107
ENSMUSG00000046145	pseudogene	1700018M17Rik	ENSMUST00000052502	pseudogene		4	1	59549154	456
ENSMUSG00000065722	snRNA	Gm26166	ENSMUST00000083788	snRNA		3	-1	58290357	107
ENSMUSG00000096120	protein_coding	Gm21800	ENSMUST00000178559	protein_coding	principal1	Y	1	41406498	543
ENSMUSG00000077708	snoRNA	Gm24071	ENSMUST00000104520	snoRNA		17	1	48617823	132
ENSMUSG00000087784	misc_RNA	Gm23171	ENSMUST00000157159	misc_RNA		5	1	124257763	264
ENSMUSG00000064670	snRNA	Gm22808	ENSMUST00000082736	snRNA		16	-1	87621120	107
ENSMUSG00000077713	snRNA	Gm25728	ENSMUST00000104525	snRNA		X	-1	9532669	159
ENSMUSG00000088425	snoRNA	Gm24422	ENSMUST00000157800	snoRNA		11	1	48684709	119
ENSMUSG00000094034	snoRNA	Gm24653	ENSMUST00000178541	snoRNA		7	-1	59358968	79
ENSMUSG00000089189	snRNA	Gm22943	ENSMUST00000158564	snRNA		17	1	33729509	76
ENSMUSG00000095509	miRNA	Mir467b	ENSMUST00000102089	miRNA		2	1	10481248	73
ENSMUSG00000104552	miRNA	Gm47309	ENSMUST00000197446	miRNA		15	1	71794186	105
ENSMUSG00000076067	miRNA	Mir592	ENSMUST00000102113	miRNA		6	-1	27936750	96
ENSMUSG00000077251	snoRNA	Gm26074	ENSMUST00000104063	snoRNA		16	-1	43833811	129
ENSMUSG00000094960	snoRNA	Gm22417	ENSMUST00000178656	snoRNA		7	-1	59711102	94
ENSMUSG00000084658	miRNA	Gm22721	ENSMUST00000122709	miRNA		10	1	80382302	83
ENSMUSG00000084548	rRNA	n-R5s175	ENSMUST00000122599	rRNA		5	1	119297245	117
ENSMUSG00000065865	snRNA	Gm24030	ENSMUST00000083931	snRNA		1	1	117536301	164
ENSMUSG00000089095	rRNA	Gm25660	ENSMUST00000158470	rRNA		18	-1	58231575	104
ENSMUSG00000096730	protein_coding	Vmn2r122	ENSMUST00000178970	protein_coding		JH584292.1	1	3573	2808
ENSMUSG00000095693	protein_coding	Gm21820	ENSMUST00000179056	protein_coding	principal1	Y	-1	5249441	1083
ENSMUSG00000106007	snoRNA	Gm23128	ENSMUST00000196578	snoRNA		8	-1	38983035	133
ENSMUSG00000095346	protein_coding	Gm21905	ENSMUST00000177616	protein_coding	principal1	5	-1	67946421	87
ENSMUSG00000070023	protein_coding	Gm10283	ENSMUST00000093494	protein_coding	principal1	8	-1	60503198	354
ENSMUSG00000077639	snoRNA	Gm22772	ENSMUST00000104451	snoRNA		11	1	77052947	121
ENSMUSG00000088548	snRNA	Gm24960	ENSMUST00000157923	snRNA		4	-1	98383491	90
ENSMUSG00000089561	snRNA	Gm24669	ENSMUST00000158936	snRNA		8	1	46272051	97
ENSMUSG00000076287	miRNA	Gm24273	ENSMUST00000102332	miRNA		1	-1	131498802	164
ENSMUSG00000065903	snRNA	Gm26111	ENSMUST00000083969	snRNA		X	1	64800511	106
ENSMUSG00000096564	snRNA	Gm24099	ENSMUST00000083384	snRNA		4	-1	112590878	107
ENSMUSG00000096730	protein_coding	Vmn2r122	ENSMUST00000099422	protein_coding		JH584292.1	1	3539	1304
ENSMUSG00000095289	miRNA	Gm22547	ENSMUST00000175281	miRNA		3	1	11154337	101
ENSMUSG00000077222	snoRNA	Gm22270	ENSMUST00000104034	snoRNA		5	1	107905177	132
ENSMUSG00000077702	snoRNA	Gm24067	ENSMUST00000104514	snoRNA		9	1	20889484	85
ENSMUSG00000065427	miRNA	Mir429	ENSMUST00000083493	miRNA		4	-1	156053987	83
ENSMUSG00000093835	miRNA	Gm23147	ENSMUST00000178841	miRNA		3	-1	6338991	110
ENSMUSG00000088782	snoRNA	Gm25375	ENSMUST00000158157	snoRNA		16	1	30889096	135
ENSMUSG00000096586	miRNA	Gm22918	ENSMUST00000103855	miRNA		10	1	100139501	110
ENSMUSG00000057577	pseudogene	Gm10025	ENSMUST00000079568	pseudogene		5	1	48924116	372
ENSMUSG00000089266	snRNA	Gm22891	ENSMUST00000158641	snRNA		14	-1	82384529	164
ENSMUSG00000088136	misc_RNA	Gm22587	ENSMUST00000157511	misc_RNA		11	-1	85297749	298
ENSMUSG00000104683	miRNA	Gm44385	ENSMUST00000198781	miRNA		5	1	141029928	81
ENSMUSG00000096817	miRNA	Gm25084	ENSMUST00000175556	miRNA		13	-1	22204675	101
ENSMUSG00000064782	snRNA	Gm22685	ENSMUST00000082848	snRNA		4	1	49289298	106
ENSMUSG00000094760	rRNA	n-R5s139	ENSMUST00000178975	rRNA		8	-1	123605066	119
ENSMUSG00000096730	protein_coding	Vmn2r122	ENSMUST00000096791	protein_coding		JH584292.1	1	3536	2949
ENSMUSG00000090805	protein_coding	CAAA01165726.1	ENSMUST00000167421	protein_coding		GL456233.1	1	25190	66
ENSMUSG00000088298	misc_RNA	Gm26415	ENSMUST00000157673	misc_RNA		X	-1	109115516	292
ENSMUSG00000089327	snoRNA	Gm25975	ENSMUST00000158702	snoRNA		4	-1	25513575	125
ENSMUSG00000094007	miRNA	Gm24169	ENSMUST00000180244	miRNA		3	-1	37256893	110
ENSMUSG00000098740	miRNA	Gm27475	ENSMUST00000183420	miRNA		17	1	91106210	61
ENSMUSG00000080350	miRNA	Gm26248	ENSMUST00000116700	miRNA		7	-1	11303338	121
ENSMUSG00000058508	pseudogene	Gm10042	ENSMUST00000079884	pseudogene		3	1	153785053	78
ENSMUSG00000088205	rRNA	Gm23392	ENSMUST00000157580	rRNA		11	1	50809651	113
ENSMUSG00000087728	misc_RNA	Gm26274	ENSMUST00000157103	misc_RNA		9	1	20807034	321
ENSMUSG00000096730	protein_coding	Vmn2r122	ENSMUST00000071277	protein_coding		JH584292.1	1	3536	2848
ENSMUSG00000093009	snoRNA	Snord52	ENSMUST00000175268	snoRNA		17	-1	34951017	66
ENSMUSG00000065495	miRNA	Mir150	ENSMUST00000083561	miRNA		7	1	45121757	65
ENSMUSG00000096730	protein_coding	Vmn2r122	ENSMUST00000179115	protein_coding		JH584292.1	1	3536	2953
ENSMUSG00000076121	miRNA	Mir687	ENSMUST00000102166	miRNA		14	-1	73206851	89
ENSMUSG00000080334	miRNA	Gm25110	ENSMUST00000116684	miRNA		8	1	84156757	121
ENSMUSG00000088208	scaRNA	Gm23751	ENSMUST00000157583	scaRNA		6	1	125121724	136
ENSMUSG00000095880	miRNA	Gm26429	ENSMUST00000104829	miRNA		17	-1	39460439	110
ENSMUSG00000087846	rRNA	Gm25625	ENSMUST00000157221	rRNA		6	-1	30347466	96
ENSMUSG00000088220	misc_RNA	Gm22601	ENSMUST00000157595	misc_RNA		19	1	41744804	250
ENSMUSG00000089414	snoRNA	Gm22010	ENSMUST00000158789	snoRNA		4	1	34006306	87
ENSMUSG00000095972	snRNA	Gm23512	ENSMUST00000180237	snRNA		18	-1	67174991	107
ENSMUSG00000088787	snRNA	Gm25371	ENSMUST00000158162	snRNA		11	1	69075015	101
ENSMUSG00000077265	snRNA	Gm24430	ENSMUST00000104077	snRNA		10	-1	86038788	104
ENSMUSG00000087995	snRNA	Gm25054	ENSMUST00000157370	snRNA		6	1	83721296	97
ENSMUSG00000092966	miRNA	Gm22240	ENSMUST00000175225	miRNA		19	-1	47919273	82
ENSMUSG00000064833	snRNA	Gm25926	ENSMUST00000082899	snRNA		12	1	77418417	160
ENSMUSG00000074922	protein_coding	Fam122a	ENSMUST00000099556	protein_coding	principal1	19	-1	24477356	855
ENSMUSG00000084546	snoRNA	Gm24937	ENSMUST00000122597	snoRNA		1	-1	113718047	134
ENSMUSG00000077059	miRNA	Gm24541	ENSMUST00000103871	miRNA		7	1	79949187	96
ENSMUSG00000095672	protein_coding	AC133103.5	ENSMUST00000178603	protein_coding		GL456211.1	-1	162404	366
ENSMUSG00000092827	miRNA	Mir3091	ENSMUST00000175086	miRNA		2	1	180257536	76
ENSMUSG00000076230	miRNA	Gm22758	ENSMUST00000102275	miRNA		2	-1	156411024	96
ENSMUSG00000065752	snoRNA	Gm23344	ENSMUST00000083818	snoRNA		9	1	64175048	68
ENSMUSG00000099285	miRNA	Gm27989	ENSMUST00000184721	miRNA		3	1	45160695	107
ENSMUSG00000096432	miRNA	Gm22132	ENSMUST00000175316	miRNA		1	-1	136757609	100
ENSMUSG00000096201	protein_coding	Gm10715	ENSMUST00000155807	protein_coding	alternative2	9	1	3036877	675
ENSMUSG00000094236	snoRNA	Gm24609	ENSMUST00000178166	snoRNA		7	-1	59695837	94
ENSMUSG00000098972	miRNA	Mir8093	ENSMUST00000185043	miRNA		2	-1	32687766	137
ENSMUSG00000088404	rRNA	Gm25885	ENSMUST00000157779	rRNA		X	1	10510048	109
ENSMUSG00000087957	rRNA	Gm22560	ENSMUST00000157332	rRNA		18	1	63509895	120
ENSMUSG00000088281	snRNA	Gm23585	ENSMUST00000157656	snRNA		7	-1	45254554	102
ENSMUSG00000065181	snoRNA	Gm25139	ENSMUST00000083247	snoRNA		10	1	12368623	210
ENSMUSG00000095506	snRNA	Gm22448	ENSMUST00000179254	snRNA		16	1	66254786	107
ENSMUSG00000105544	miRNA	Gm44477	ENSMUST00000199661	miRNA		X	-1	94394927	110
ENSMUSG00000088358	snoRNA	Gm24008	ENSMUST00000157733	snoRNA		6	-1	115723832	138
ENSMUSG00000096201	protein_coding	Gm10715	ENSMUST00000177969	protein_coding	principal5	9	1	3037111	681
ENSMUSG00000077671	snoRNA	Gm24473	ENSMUST00000104483	snoRNA		2	1	164621922	131
ENSMUSG00000098908	snoRNA	Gm27931	ENSMUST00000184976	snoRNA		16	-1	38207591	129
ENSMUSG00000096430	snoRNA	Gm22130	ENSMUST00000179979	snoRNA		7	-1	59426873	79
ENSMUSG00000094969	miRNA	Gm22420	ENSMUST00000178795	miRNA		17	-1	26580927	126
ENSMUSG00000084629	snRNA	Gm25112	ENSMUST00000122680	snRNA		12	-1	116476999	104
ENSMUSG00000093011	miRNA	Mir100	ENSMUST00000175270	miRNA		9	1	41531425	80
ENSMUSG00000069518	protein_coding	Gm10271	ENSMUST00000092165	protein_coding	principal1	10	-1	116972609	156
ENSMUSG00000076379	miRNA	Mir190a	ENSMUST00000102424	miRNA		9	-1	67236726	67
ENSMUSG00000092995	miRNA	Mir16-1	ENSMUST00000175254	miRNA		14	-1	61631972	93
ENSMUSG00000077276	snoRNA	Gm22784	ENSMUST00000104088	snoRNA		3	-1	55956913	132
ENSMUSG00000064581	snoRNA	Gm25133	ENSMUST00000082647	snoRNA		14	1	96588827	130
ENSMUSG00000095393	snRNA	Gm25619	ENSMUST00000122621	snRNA		1	1	139786983	104
ENSMUSG00000065858	snRNA	Gm22350	ENSMUST00000083924	snRNA		14	1	18445875	156
ENSMUSG00000093021	miRNA	Gm25303	ENSMUST00000175280	miRNA		15	-1	36798771	74
ENSMUSG00000096832	snoRNA	Gm50451	ENSMUST00000116685	snoRNA		5	-1	23711061	71
ENSMUSG00000080485	miRNA	Gm23493	ENSMUST00000116835	miRNA		16	1	3927199	88
ENSMUSG00000098845	misc_RNA	Gm27894	ENSMUST00000184177	misc_RNA		6	1	10858427	92
ENSMUSG00000096646	protein_coding	CR974586.5	ENSMUST00000178723	protein_coding		JH584293.1	-1	87710	1395
ENSMUSG00000052241	pseudogene	A930035D04Rik	ENSMUST00000064013	pseudogene		6	-1	47454320	543
ENSMUSG00000099267	miRNA	Mir6955	ENSMUST00000183370	miRNA		15	1	78891840	74
ENSMUSG00000093147	snRNA	Gm23369	ENSMUST00000175406	snRNA		2	-1	32593573	105
ENSMUSG00000084426	snoRNA	Gm25105	ENSMUST00000122477	snoRNA		9	-1	73795257	130
ENSMUSG00000098491	misc_RNA	Gm27688	ENSMUST00000183634	misc_RNA		4	1	116725899	91
ENSMUSG00000084555	snRNA	Gm25270	ENSMUST00000122606	snRNA		4	-1	133797719	138
ENSMUSG00000095033	snRNA	Gm22349	ENSMUST00000157864	snRNA		16	1	36403779	107
ENSMUSG00000105424	miRNA	Gm44304	ENSMUST00000200509	miRNA		17	-1	49096433	145
ENSMUSG00000092643	miRNA	Gm23562	ENSMUST00000174902	miRNA		15	-1	46434869	62
ENSMUSG00000063277	protein_coding	Gm10128	ENSMUST00000171360	protein_coding	principal1	14	-1	7643972	615
ENSMUSG00000089454	snoRNA	Gm24228	ENSMUST00000158829	snoRNA		18	1	15874661	129
ENSMUSG00000079264	protein_coding	Gm11077	ENSMUST00000111844	protein_coding	principal1	6	1	140729284	84
ENSMUSG00000080600	miRNA	Gm23840	ENSMUST00000116950	miRNA		11	-1	78754522	97
ENSMUSG00000065277	snRNA	Gm25126	ENSMUST00000083343	snRNA		8	-1	37317578	102
ENSMUSG00000099017	miRNA	Mir7058	ENSMUST00000184637	miRNA		7	-1	126368045	75
ENSMUSG00000084498	rRNA	n-R5s98	ENSMUST00000122549	rRNA		8	1	54866261	119
ENSMUSG00000089490	misc_RNA	Gm26362	ENSMUST00000158865	misc_RNA		6	1	111992110	315
ENSMUSG00000095435	miRNA	Gm22745	ENSMUST00000175509	miRNA		16	1	94869464	70
ENSMUSG00000096889	miRNA	Gm23571	ENSMUST00000180073	miRNA		2	1	10499763	127
ENSMUSG00000064572	snRNA	Gm25801	ENSMUST00000082638	snRNA		12	-1	100769128	106
ENSMUSG00000092123	protein_coding	Gm17581	ENSMUST00000166589	protein_coding	principal1	2	-1	155735866	57
ENSMUSG00000096809	snRNA	Gm23410	ENSMUST00000179967	snRNA		10	1	24893980	107
ENSMUSG00000098866	miRNA	Mir6539	ENSMUST00000183732	miRNA		14	-1	67859745	110
ENSMUSG00000077190	snoRNA	Gm22269	ENSMUST00000104002	snoRNA		3	1	57054150	130
ENSMUSG00000098385	misc_RNA	Gm27500	ENSMUST00000184331	misc_RNA		4	-1	152202142	336
ENSMUSG00000088972	snRNA	Gm23761	ENSMUST00000158347	snRNA		5	1	130782701	104
ENSMUSG00000088582	snoRNA	Gm22966	ENSMUST00000157957	snoRNA		1	-1	148327108	129
ENSMUSG00000077851	miRNA	Mir876	ENSMUST00000104659	miRNA		4	-1	36645453	81
ENSMUSG00000087863	misc_RNA	Gm24442	ENSMUST00000157238	misc_RNA		6	1	4382878	327
ENSMUSG00000064883	misc_RNA	Gm24203	ENSMUST00000082949	misc_RNA		4	1	98275725	114
ENSMUSG00000106406	miRNA	Mir7682	ENSMUST00000198467	miRNA		1	1	151442393	58
ENSMUSG00000087867	snoRNA	Gm24443	ENSMUST00000157242	snoRNA		6	-1	25078903	132
ENSMUSG00000093883	protein_coding	Gm21866	ENSMUST00000178428	protein_coding	principal1	Y	-1	13465579	543
ENSMUSG00000067627	protein_coding	Gm10217	ENSMUST00000088080	protein_coding	principal1	8	1	9864251	135
ENSMUSG00000093660	snRNA	Gm26505	ENSMUST00000176208	snRNA		2	1	113288273	166
ENSMUSG00000095299	snRNA	Gm25380	ENSMUST00000175463	snRNA		14	-1	48696088	107
ENSMUSG00000077701	snoRNA	Gm24068	ENSMUST00000104513	snoRNA		4	-1	14079940	132
ENSMUSG00000077039	miRNA	Gm25537	ENSMUST00000103851	miRNA		1	1	100861793	109
ENSMUSG00000096896	snoRNA	Gm25244	ENSMUST00000178089	snoRNA		4	-1	90997993	132
ENSMUSG00000098319	miRNA	Mir7038	ENSMUST00000184833	miRNA		5	1	140427339	71
ENSMUSG00000096314	miRNA	Gm23521	ENSMUST00000177845	miRNA		7	-1	12359007	110
ENSMUSG00000064854	snRNA	Gm24527	ENSMUST00000082920	snRNA		13	-1	106780220	107
ENSMUSG00000074108	processed_pseudogene	Rpl10-ps2	ENSMUST00000098432	processed_pseudogene		8	-1	106928413	645
ENSMUSG00000089284	snoRNA	Gm26029	ENSMUST00000158659	snoRNA		X	-1	129156885	132
ENSMUSG00000077709	snoRNA	Snora64	ENSMUST00000104521	snoRNA		17	1	24720772	134
ENSMUSG00000064514	snoRNA	Gm22455	ENSMUST00000082580	snoRNA		9	1	64177123	71
ENSMUSG00000077549	snoRNA	Snord71	ENSMUST00000104361	snoRNA		8	1	109839295	85
ENSMUSG00000089507	snoRNA	Gm23477	ENSMUST00000158882	snoRNA		3	-1	70228874	128
ENSMUSG00000094337	protein_coding	Gm3286	ENSMUST00000179140	protein_coding		GL456354.1	-1	86051	1446
ENSMUSG00000080415	miRNA	Gm26469	ENSMUST00000116765	miRNA		2	1	169061120	121
ENSMUSG00000099191	miRNA	Gm27375	ENSMUST00000183799	miRNA		14	1	51837151	107
ENSMUSG00000098882	miRNA	Mir6392	ENSMUST00000184924	miRNA		15	1	84168270	108
ENSMUSG00000094337	protein_coding	Gm3286	ENSMUST00000164489	protein_coding		GL456354.1	-1	86051	855
ENSMUSG00000093067	miRNA	Gm23156	ENSMUST00000175326	miRNA		9	1	108844478	86
ENSMUSG00000080411	miRNA	Mir1193	ENSMUST00000116761	miRNA		12	1	109715671	121
ENSMUSG00000065589	miRNA	Mir301	ENSMUST00000083655	miRNA		11	1	87113004	86
ENSMUSG00000088327	snRNA	Gm25666	ENSMUST00000157702	snRNA		5	-1	30514684	107
ENSMUSG00000084497	snRNA	Gm22107	ENSMUST00000122548	snRNA		15	-1	77840756	100
ENSMUSG00000087997	snRNA	Gm25056	ENSMUST00000157372	snRNA		3	-1	151926409	62
ENSMUSG00000106362	miRNA	Gm47279	ENSMUST00000197943	miRNA		11	-1	23497839	91
ENSMUSG00000095989	miRNA	Gm23049	ENSMUST00000178068	miRNA		6	1	29988388	102
ENSMUSG00000075952	snRNA	Gm23422	ENSMUST00000102000	snRNA		1	1	70596815	107
ENSMUSG00000088086	misc_RNA	Gm25341	ENSMUST00000157461	misc_RNA		9	1	122812564	268
ENSMUSG00000088334	misc_RNA	Gm22842	ENSMUST00000157709	misc_RNA		2	1	180837838	118
ENSMUSG00000096067	snoRNA	Gm23682	ENSMUST00000178146	snoRNA		7	-1	59544693	79
ENSMUSG00000093311	miRNA	Mir3965	ENSMUST00000175570	miRNA		5	1	134326454	69
ENSMUSG00000106655	miRNA	Mir3961	ENSMUST00000198795	miRNA		13	-1	82698333	59
ENSMUSG00000064798	rRNA	n-R5s193	ENSMUST00000082864	rRNA		4	1	149817732	109
ENSMUSG00000095878	miRNA	Gm23045	ENSMUST00000175041	miRNA		4	1	140692697	96
ENSMUSG00000065787	snRNA	Gm22681	ENSMUST00000083853	snRNA		1	-1	144960839	106
ENSMUSG00000099045	miRNA	Mir6374	ENSMUST00000184003	miRNA		6	-1	83401102	107
ENSMUSG00000095256	rRNA	n-R5s209	ENSMUST00000179494	rRNA		1	-1	26959221	119
ENSMUSG00000098770	miRNA	Gm27440	ENSMUST00000184785	miRNA		19	-1	33592713	107
ENSMUSG00000105913	miRNA	Mir5121	ENSMUST00000198528	miRNA		7	-1	45126991	74
ENSMUSG00000098932	miRNA	Mir6410	ENSMUST00000184204	miRNA		10	1	78434799	104
ENSMUSG00000099236	miRNA	Mir668	ENSMUST00000183620	miRNA		12	1	109734732	66
ENSMUSG00000094754	snRNA	Gm25020	ENSMUST00000178071	snRNA		13	1	17206021	107
ENSMUSG00000084671	misc_RNA	Gm26023	ENSMUST00000122722	misc_RNA		16	-1	81262015	313
ENSMUSG00000095701	snRNA	Gm24830	ENSMUST00000102024	snRNA		3	1	96328425	166
ENSMUSG00000088641	miRNA	Gm26483	ENSMUST00000158016	miRNA		8	1	12666095	104
ENSMUSG00000084550	snRNA	Gm25269	ENSMUST00000122601	snRNA		1	1	188760476	104
ENSMUSG00000089417	scaRNA	Gm22009	ENSMUST00000158792	scaRNA		3	-1	69085447	343
ENSMUSG00000094068	snoRNA	Gm25156	ENSMUST00000179809	snoRNA		7	-1	59353361	79
ENSMUSG00000088028	misc_RNA	Gm22141	ENSMUST00000157403	misc_RNA		9	1	44363452	277
ENSMUSG00000098884	miRNA	Mir7689	ENSMUST00000184943	miRNA		5	1	36301570	59
ENSMUSG00000094442	snoRNA	Gm25452	ENSMUST00000178776	snoRNA		7	-1	59591500	79
ENSMUSG00000077733	snoRNA	Gm23608	ENSMUST00000104545	snoRNA		2	-1	10075780	128
ENSMUSG00000064900	snoRNA	Gm25402	ENSMUST00000082966	snoRNA		6	-1	39422419	131
ENSMUSG00000078057	miRNA	Mir873a	ENSMUST00000104863	miRNA		4	-1	36668586	77
ENSMUSG00000106183	miRNA	Mir101c	ENSMUST00000195989	miRNA		9	-1	3038743	75
ENSMUSG00000084591	misc_RNA	Gm22344	ENSMUST00000122642	misc_RNA		16	1	93654324	278
ENSMUSG00000096563	snoRNA	Gm24095	ENSMUST00000083063	snoRNA		13	-1	62543335	133
ENSMUSG00000084480	rRNA	n-R5s155	ENSMUST00000122531	rRNA		7	1	90293734	113
ENSMUSG00000089038	rRNA	Gm22164	ENSMUST00000158413	rRNA		14	-1	73945638	106
ENSMUSG00000065892	snRNA	Gm24521	ENSMUST00000083958	snRNA		19	1	12665255	107
ENSMUSG00000089517	snoRNA	Gm24899	ENSMUST00000158892	snoRNA		12	1	109641022	73
ENSMUSG00000099050	miRNA	Mir7655	ENSMUST00000183376	miRNA		2	1	18057846	58
ENSMUSG00000092745	miRNA	Mir5122	ENSMUST00000175004	miRNA		4	1	133369776	89
ENSMUSG00000094836	protein_coding	AC123873.3	ENSMUST00000097490	protein_coding		JH584299.1	1	4975	1080
ENSMUSG00000065100	snoRNA	Gm26132	ENSMUST00000083166	snoRNA		8	1	110923116	148
ENSMUSG00000092845	miRNA	Gm24328	ENSMUST00000175104	miRNA		2	-1	25055175	67
ENSMUSG00000094101	miRNA	Gm22775	ENSMUST00000177630	miRNA		2	1	10485250	120
ENSMUSG00000065513	miRNA	Mir26a-1	ENSMUST00000083579	miRNA		9	1	119031796	90
ENSMUSG00000088380	snRNA	Gm24686	ENSMUST00000157755	snRNA		5	1	6410438	93
ENSMUSG00000095678	snRNA	Gm25101	ENSMUST00000179057	snRNA		15	1	21114369	107
ENSMUSG00000093032	miRNA	Gm23631	ENSMUST00000175291	miRNA		7	-1	133939741	123
ENSMUSG00000064630	snRNA	Gm25143	ENSMUST00000082696	snRNA		10	1	103959543	109
ENSMUSG00000096090	snoRNA	Gm26334	ENSMUST00000179403	snoRNA		7	-1	59548437	79
ENSMUSG00000088532	snRNA	Gm22706	ENSMUST00000157907	snRNA		4	-1	44081400	112
ENSMUSG00000080441	miRNA	Mir1249	ENSMUST00000116791	miRNA		15	-1	84951623	98
ENSMUSG00000077260	snoRNA	Gm24869	ENSMUST00000104072	snoRNA		4	1	102736812	128
ENSMUSG00000080533	miRNA	Mir1191	ENSMUST00000116883	miRNA		7	1	27205536	120
ENSMUSG00000077460	snoRNA	Gm26419	ENSMUST00000104272	snoRNA		16	1	32065910	133
ENSMUSG00000088975	snoRNA	Gm23760	ENSMUST00000158350	snoRNA		6	1	14113316	116
ENSMUSG00000093014	miRNA	Gm22464	ENSMUST00000175273	miRNA		X	1	15707782	64
ENSMUSG00000096288	snRNA	Gm22251	ENSMUST00000083216	snRNA		18	-1	13209808	107
ENSMUSG00000077630	snoRNA	Gm22149	ENSMUST00000104442	snoRNA		12	-1	82772456	136
ENSMUSG00000064687	snRNA	Gm25811	ENSMUST00000082753	snRNA		4	-1	86043494	101
ENSMUSG00000096565	snoRNA	Gm24100	ENSMUST00000178592	snoRNA		7	-1	59598982	79
ENSMUSG00000077361	snoRNA	Gm23481	ENSMUST00000104173	snoRNA		10	-1	46658638	131
ENSMUSG00000079600	protein_coding	Gm17604	ENSMUST00000114890	protein_coding	principal1	X	-1	165004829	75
ENSMUSG00000089397	snRNA	Gm23026	ENSMUST00000158772	snRNA		19	1	37463746	106
ENSMUSG00000088463	misc_RNA	Gm24749	ENSMUST00000157838	misc_RNA		3	1	78842224	343
ENSMUSG00000098507	miRNA	Gm27935	ENSMUST00000183894	miRNA		19	-1	49709872	79
ENSMUSG00000089453	misc_RNA	Gm24224	ENSMUST00000158828	misc_RNA		7	-1	79352745	258
ENSMUSG00000104794	miRNA	Mir28c	ENSMUST00000200096	miRNA		15	-1	53614279	75
ENSMUSG00000089087	snoRNA	Gm24006	ENSMUST00000158462	snoRNA		19	1	35203235	132
ENSMUSG00000088342	rRNA	Gm22340	ENSMUST00000157717	rRNA		18	-1	12578537	114
ENSMUSG00000088207	rRNA	Gm23756	ENSMUST00000157582	rRNA		12	1	4347647	114
ENSMUSG00000095246	miRNA	Gm24752	ENSMUST00000178240	miRNA		7	-1	4393120	110
ENSMUSG00000076315	miRNA	Mir343	ENSMUST00000102360	miRNA		7	1	19386643	75
ENSMUSG00000076256	miRNA	Mir19b-1	ENSMUST00000102301	miRNA		14	1	115044305	87
ENSMUSG00000065651	snoRNA	Gm25973	ENSMUST00000083717	snoRNA		17	-1	36842352	127
ENSMUSG00000106145	miRNA	Mir7073	ENSMUST00000197815	miRNA		8	-1	95753214	64
ENSMUSG00000077477	snoRNA	Gm24793	ENSMUST00000104289	snoRNA		8	1	111418732	132
ENSMUSG00000088168	snRNA	Gm23540	ENSMUST00000157543	snRNA		4	-1	121084149	164
ENSMUSG00000091041	protein_coding	Gm17720	ENSMUST00000165700	protein_coding	principal1	8	-1	110102753	27
ENSMUSG00000087796	snRNA	Gm25964	ENSMUST00000157171	snRNA		14	1	13868143	97
ENSMUSG00000078008	miRNA	Mir291a	ENSMUST00000104815	miRNA		7	1	3218919	82
ENSMUSG00000065817	snoRNA	Gm24698	ENSMUST00000083883	snoRNA		8	1	13876097	130
ENSMUSG00000065683	snRNA	Gm23731	ENSMUST00000083749	snRNA		2	1	102897960	107
ENSMUSG00000098307	miRNA	Gm27460	ENSMUST00000184213	miRNA		3	-1	3027757	100
ENSMUSG00000098920	misc_RNA	Gm27427	ENSMUST00000185134	misc_RNA		17	1	85619225	193
ENSMUSG00000098942	miRNA	Mir8100	ENSMUST00000184230	miRNA		11	1	46102270	121
ENSMUSG00000076338	miRNA	Mir181d	ENSMUST00000102383	miRNA		8	-1	84178787	72
ENSMUSG00000098586	miRNA	Gm27775	ENSMUST00000184919	miRNA		17	1	26920962	58
ENSMUSG00000093003	miRNA	Mir3473c	ENSMUST00000175262	miRNA		1	-1	191998634	81
ENSMUSG00000089420	snRNA	Gm27934	ENSMUST00000158795	snRNA		1	1	66856641	63
ENSMUSG00000105904	miRNA	Mir24-1	ENSMUST00000198479	miRNA		13	1	63301208	68
ENSMUSG00000075832	snRNA	Gm22004	ENSMUST00000101884	snRNA		12	1	86655125	107
ENSMUSG00000080454	miRNA	Gm24195	ENSMUST00000116804	miRNA		13	1	54578113	137
ENSMUSG00000094372	pseudogene	Gm21839	ENSMUST00000179536	pseudogene		5	-1	135644336	378
ENSMUSG00000065586	miRNA	Mir96	ENSMUST00000083652	miRNA		6	-1	30169551	106
ENSMUSG00000088680	rRNA	Gm23997	ENSMUST00000158055	rRNA		19	1	7259941	121
ENSMUSG00000098657	sRNA	Gm27675	ENSMUST00000184527	sRNA		7	1	6730598	94
ENSMUSG00000095786	miRNA	Gm24673	ENSMUST00000116948	miRNA		2	1	10491860	124
ENSMUSG00000104989	miRNA	Gm44481	ENSMUST00000197288	miRNA		1	1	173524086	84
ENSMUSG00000064948	snRNA	Gm23241	ENSMUST00000083014	snRNA		10	-1	128299524	106
ENSMUSG00000098259	miRNA	Gm27616	ENSMUST00000184547	miRNA		1	-1	162674220	63
ENSMUSG00000096196	miRNA	Gm26137	ENSMUST00000116701	miRNA		3	1	119837904	121
ENSMUSG00000092916	miRNA	Gm24082	ENSMUST00000175175	miRNA		5	1	138606699	83
ENSMUSG00000064795	snRNA	Gm22423	ENSMUST00000082861	snRNA		11	-1	96083856	184
ENSMUSG00000093075	miRNA	Gm25948	ENSMUST00000175334	miRNA		11	-1	120068238	112
ENSMUSG00000089314	snRNA	Gm23185	ENSMUST00000158689	snRNA		15	-1	48906736	85
ENSMUSG00000065472	miRNA	Mir125b-2	ENSMUST00000083538	miRNA		16	1	77646273	71
ENSMUSG00000064882	snRNA	Gm24202	ENSMUST00000082948	snRNA		8	-1	27761111	103
ENSMUSG00000076049	miRNA	Mir598	ENSMUST00000102094	miRNA		14	1	63727189	79
ENSMUSG00000077022	miRNA	Gm22707	ENSMUST00000103834	miRNA		7	1	43204352	110
ENSMUSG00000088997	snRNA	Gm22766	ENSMUST00000158372	snRNA		12	1	21354354	99
ENSMUSG00000065331	snRNA	Gm24927	ENSMUST00000083397	snRNA		16	-1	17342012	107
ENSMUSG00000106344	miRNA	Mir1892	ENSMUST00000197752	miRNA		12	-1	54646012	80
ENSMUSG00000077564	snoRNA	Gm23202	ENSMUST00000104376	snoRNA		5	1	146835144	129
ENSMUSG00000088948	snoRNA	Gm23262	ENSMUST00000158323	snoRNA		7	-1	111076227	168
ENSMUSG00000065702	snRNA	Gm22828	ENSMUST00000083768	snRNA		6	1	19624609	107
ENSMUSG00000087933	snoRNA	Gm26047	ENSMUST00000157308	snoRNA		4	-1	106119080	113
ENSMUSG00000065620	snRNA	Gm24764	ENSMUST00000083686	snRNA		9	-1	37822784	199
ENSMUSG00000098914	misc_RNA	Gm27747	ENSMUST00000184707	misc_RNA		14	1	61643371	85
ENSMUSG00000098323	misc_RNA	Gm27275	ENSMUST00000184318	misc_RNA		17	1	85616702	272
ENSMUSG00000088565	misc_RNA	Gm23781	ENSMUST00000157940	misc_RNA		12	-1	11689004	308
ENSMUSG00000064724	snoRNA	Gm25852	ENSMUST00000082790	snoRNA		6	-1	97547567	130
ENSMUSG00000064548	rRNA	n-R5s65	ENSMUST00000082614	rRNA		12	1	90801619	117
ENSMUSG00000095169	snoRNA	Gm25546	ENSMUST00000103977	snoRNA		15	-1	94681386	132
ENSMUSG00000002658	protein_coding	Gtf2f1	ENSMUST00000002733	protein_coding	principal1	17	-1	57011288	1717
ENSMUSG00000099147	miRNA	Mir7081	ENSMUST00000184490	miRNA		9	-1	20914164	75
ENSMUSG00000106203	miRNA	Gm44484	ENSMUST00000199873	miRNA		13	-1	23751515	138
ENSMUSG00000116166	protein_coding	Gm49403	ENSMUST00000177826	protein_coding	principal1	19	1	8883930	534
ENSMUSG00000095933	miRNA	Gm25700	ENSMUST00000177693	miRNA		13	-1	86725932	110
ENSMUSG00000089242	snRNA	Gm24056	ENSMUST00000158617	snRNA		15	-1	77242551	146
ENSMUSG00000065533	miRNA	Mir205	ENSMUST00000083599	miRNA		1	-1	193507530	68
ENSMUSG00000098281	miRNA	Gm27529	ENSMUST00000184975	miRNA		15	1	7975328	80
ENSMUSG00000089282	misc_RNA	Gm26024	ENSMUST00000158657	misc_RNA		X	1	144820187	322
ENSMUSG00000093118	miRNA	Mir3083	ENSMUST00000175377	miRNA		17	-1	26948119	64
ENSMUSG00000064890	snRNA	Gm22505	ENSMUST00000082956	snRNA		3	-1	99707847	108
ENSMUSG00000087925	snRNA	Gm23232	ENSMUST00000157300	snRNA		9	-1	114602192	105
ENSMUSG00000088485	snRNA	Gm23640	ENSMUST00000157860	snRNA		11	-1	98870499	104
ENSMUSG00000080636	miRNA	Gm25510	ENSMUST00000116986	miRNA		9	1	115382099	123
ENSMUSG00000084635	misc_RNA	Gm23883	ENSMUST00000122686	misc_RNA		10	-1	50866364	290
ENSMUSG00000064622	snoRNA	Gm22304	ENSMUST00000082688	snoRNA		9	1	53639977	129
ENSMUSG00000076238	miRNA	Gm22582	ENSMUST00000102283	miRNA		10	1	92587214	94
ENSMUSG00000077107	miRNA	Mir344c	ENSMUST00000103919	miRNA		7	-1	61837402	92
ENSMUSG00000065409	miRNA	Mir30e	ENSMUST00000083475	miRNA		4	-1	120772697	92
ENSMUSG00000097221	protein_coding	1810049J17Rik	ENSMUST00000180521	protein_coding	principal1	15	-1	12321899	462
ENSMUSG00000084468	miRNA	Gm22955	ENSMUST00000122519	miRNA		1	-1	86637608	57
ENSMUSG00000065227	snRNA	Gm25790	ENSMUST00000083293	snRNA		7	-1	84323415	107
ENSMUSG00000084683	misc_RNA	Gm22025	ENSMUST00000122734	misc_RNA		X	-1	140642261	302
ENSMUSG00000093017	miRNA	Mir5108	ENSMUST00000175276	miRNA		10	1	61774737	85
ENSMUSG00000087743	snRNA	Gm25153	ENSMUST00000157118	snRNA		3	1	122464727	156
ENSMUSG00000096772	snRNA	Gm22114	ENSMUST00000177756	snRNA		1	-1	169799556	107
ENSMUSG00000094856	protein_coding	Gm21962	ENSMUST00000166899	protein_coding	principal1	3	1	137671524	1017
ENSMUSG00000089571	snoRNA	Gm23008	ENSMUST00000158946	snoRNA		9	1	20890757	80
ENSMUSG00000098693	snoRNA	Gm27619	ENSMUST00000184419	snoRNA		4	-1	134167895	88
ENSMUSG00000080427	miRNA	Gm24835	ENSMUST00000116777	miRNA		X	-1	91252747	111
ENSMUSG00000098547	miRNA	Mir6921	ENSMUST00000183719	miRNA		11	-1	60200617	80
ENSMUSG00000084601	snRNA	Gm23111	ENSMUST00000122652	snRNA		17	1	33959663	105
ENSMUSG00000088930	snoRNA	Gm25921	ENSMUST00000158305	snoRNA		17	1	25306112	137
ENSMUSG00000094848	snRNA	Gm22638	ENSMUST00000179674	snRNA		7	1	38380349	107
ENSMUSG00000065623	snRNA	Gm24762	ENSMUST00000083689	snRNA		4	-1	132547207	104
ENSMUSG00000096027	miRNA	Mir467a-2	ENSMUST00000179447	miRNA		2	1	10478798	83
ENSMUSG00000105138	miRNA	Mir6964	ENSMUST00000200252	miRNA		16	-1	97877291	59
ENSMUSG00000094765	snoRNA	Gm25523	ENSMUST00000178044	snoRNA		7	-1	59509146	79
ENSMUSG00000093005	miRNA	Gm24159	ENSMUST00000175264	miRNA		8	-1	93933936	102
ENSMUSG00000095009	snoRNA	Gm25175	ENSMUST00000178712	snoRNA		7	-1	59470112	79
ENSMUSG00000095623	protein_coding	Il11ra2	ENSMUST00000179240	protein_coding		JH584294.1	-1	9702	1299
ENSMUSG00000077615	snoRNA	Gm25499	ENSMUST00000104427	snoRNA		7	-1	59342294	69
ENSMUSG00000093042	miRNA	Mir3109	ENSMUST00000175301	miRNA		9	1	69456944	88
ENSMUSG00000098700	miRNA	Gm27525	ENSMUST00000184465	miRNA		15	1	22274070	107
ENSMUSG00000104884	miRNA	Mir5046	ENSMUST00000199140	miRNA		19	-1	6829944	59
ENSMUSG00000098288	miRNA	Mir6900	ENSMUST00000183483	miRNA		1	-1	92464542	60
ENSMUSG00000087798	snoRNA	Gm25962	ENSMUST00000157173	snoRNA		10	-1	93916336	168
ENSMUSG00000089304	snoRNA	Gm24844	ENSMUST00000158679	snoRNA		15	-1	11361737	127
ENSMUSG00000094462	protein_coding	Gm21028	ENSMUST00000179470	protein_coding	principal1	7	-1	42578588	123
ENSMUSG00000098577	miRNA	Gm27445	ENSMUST00000184484	miRNA		4	-1	131992289	72
ENSMUSG00000064735	snRNA	Gm23057	ENSMUST00000082801	snRNA		9	1	72633447	107
ENSMUSG00000088743	misc_RNA	Gm23221	ENSMUST00000158118	misc_RNA		9	1	62020594	93
ENSMUSG00000094668	snRNA	Gm24871	ENSMUST00000083099	snRNA		1	-1	171503163	116
ENSMUSG00000077200	snoRNA	Gm25613	ENSMUST00000104012	snoRNA		10	1	40109462	129
ENSMUSG00000065778	snoRNA	Gm22154	ENSMUST00000083844	snoRNA		4	1	123293152	131
ENSMUSG00000105964	miRNA	Mir219c	ENSMUST00000199860	miRNA		17	1	34025012	60
ENSMUSG00000095947	miRNA	Gm25195	ENSMUST00000177656	miRNA		17	1	28526332	126
ENSMUSG00000065499	miRNA	Mir384	ENSMUST00000083565	miRNA		X	-1	105344369	88
ENSMUSG00000093956	snRNA	Gm24497	ENSMUST00000177868	snRNA		1	1	72244213	191
ENSMUSG00000095915	rRNA	n-R5s115	ENSMUST00000179019	rRNA		8	-1	123564404	119
ENSMUSG00000093943	snoRNA	Gm22834	ENSMUST00000102021	snoRNA		7	-1	59475700	79
ENSMUSG00000095697	miRNA	Mir683-1	ENSMUST00000179371	miRNA		13	-1	50544734	109
ENSMUSG00000098344	miRNA	Mir3473f	ENSMUST00000183743	miRNA		1	-1	106546631	136
ENSMUSG00000064486	snRNA	Gm23293	ENSMUST00000082552	snRNA		11	1	79595165	104
ENSMUSG00000078850	processed_pseudogene	Gm2348	ENSMUST00000108782	processed_pseudogene		15	-1	8529434	300
ENSMUSG00000088139	snRNA	Gm27343	ENSMUST00000157514	snRNA		2	1	152417262	63
ENSMUSG00000065404	miRNA	Mir201	ENSMUST00000083470	miRNA		X	-1	67988161	66
ENSMUSG00000079794	protein_coding	AC125149.2	ENSMUST00000115931	protein_coding		GL456210.1	-1	136519	255
ENSMUSG00000076063	miRNA	Mir539	ENSMUST00000102109	miRNA		12	1	109728129	74
ENSMUSG00000106605	miRNA	Gm44365	ENSMUST00000197671	miRNA		8	-1	23102096	125
ENSMUSG00000088577	snoRNA	Gm25456	ENSMUST00000157952	snoRNA		9	-1	108430152	109
ENSMUSG00000077473	snoRNA	Gm24790	ENSMUST00000104285	snoRNA		13	-1	5189934	132
ENSMUSG00000088758	snRNA	Gm24898	ENSMUST00000158133	snRNA		16	1	21774113	106
ENSMUSG00000087964	snoRNA	Gm25388	ENSMUST00000157339	snoRNA		2	-1	57653822	151
ENSMUSG00000088159	snoRNA	Gm26345	ENSMUST00000157534	snoRNA		1	-1	15019159	120
ENSMUSG00000077786	snoRNA	Gm23909	ENSMUST00000104598	snoRNA		14	-1	37437620	131
ENSMUSG00000095843	miRNA	Gm26491	ENSMUST00000179268	miRNA		2	1	10475500	121
ENSMUSG00000093932	snRNA	Gm25525	ENSMUST00000177701	snRNA		5	1	138378591	107
ENSMUSG00000095476	snoRNA	Gm25077	ENSMUST00000179157	snoRNA		7	-1	59473854	79
ENSMUSG00000098803	miRNA	Gm27468	ENSMUST00000183577	miRNA		19	-1	5201303	106
ENSMUSG00000098658	miRNA	Mir6338	ENSMUST00000183389	miRNA		11	1	72388756	109
ENSMUSG00000079230	pseudogene	Gm11065	ENSMUST00000111462	pseudogene		6	1	70295177	228
ENSMUSG00000077693	snoRNA	Gm25345	ENSMUST00000104505	snoRNA		7	1	88343969	133
ENSMUSG00000098336	miRNA	Mir6388	ENSMUST00000184417	miRNA		12	-1	115695794	75
ENSMUSG00000094253	miRNA	Mir3471-2	ENSMUST00000174896	miRNA		4	1	3537090	102
ENSMUSG00000089237	snoRNA	Gm22206	ENSMUST00000158612	snoRNA		3	1	153708911	116
ENSMUSG00000089382	misc_RNA	Gm24675	ENSMUST00000158757	misc_RNA		X	-1	138145640	259
ENSMUSG00000089019	snRNA	Gm25522	ENSMUST00000158394	snRNA		10	-1	104865308	105
ENSMUSG00000064481	snRNA	Gm23737	ENSMUST00000082547	snRNA		15	1	89019221	159
ENSMUSG00000064400	snoRNA	Gm23927	ENSMUST00000082466	snoRNA		19	-1	4078512	215
ENSMUSG00000065700	snRNA	Gm22827	ENSMUST00000083766	snRNA		8	1	112062505	107
ENSMUSG00000080440	snoRNA	Gm25848	ENSMUST00000116790	snoRNA		16	-1	32243855	144
ENSMUSG00000089452	snRNA	Gm24223	ENSMUST00000158827	snRNA		3	1	104700870	90
ENSMUSG00000089051	snRNA	Gm23354	ENSMUST00000158426	snRNA		4	-1	108041800	104
ENSMUSG00000099292	miRNA	Mir6916	ENSMUST00000184514	miRNA		10	-1	128512030	63
ENSMUSG00000093163	miRNA	Gm22994	ENSMUST00000175422	miRNA		4	-1	129282946	82
ENSMUSG00000096238	snRNA	Gm22583	ENSMUST00000178031	snRNA		5	1	110757085	107
ENSMUSG00000064927	snRNA	Gm22043	ENSMUST00000082993	snRNA		3	1	40992693	158
ENSMUSG00000088493	snoRNA	Gm24401	ENSMUST00000157868	snoRNA		18	1	37705979	91
ENSMUSG00000096558	snoRNA	Gm23568	ENSMUST00000177960	snoRNA		8	-1	21456181	92
ENSMUSG00000093870	snoRNA	Gm25461	ENSMUST00000179293	snoRNA		7	-1	59516617	79
ENSMUSG00000089179	snoRNA	Gm22428	ENSMUST00000158554	snoRNA		8	-1	91061396	132
ENSMUSG00000089510	snRNA	Gm25307	ENSMUST00000158885	snRNA		3	-1	132537665	106
ENSMUSG00000088558	snoRNA	Gm22506	ENSMUST00000157933	snoRNA		19	-1	22235618	98
ENSMUSG00000078251	pseudogene	Gm16487	ENSMUST00000105048	pseudogene		11	1	113467977	4037
ENSMUSG00000106657	miRNA	Gm47303	ENSMUST00000198370	miRNA		9	-1	108103246	118
ENSMUSG00000095086	snRNA	Gm25327	ENSMUST00000180263	snRNA		6	-1	120143750	107
ENSMUSG00000099060	miRNA	Mir7025	ENSMUST00000183797	miRNA		5	1	75176831	74
ENSMUSG00000093329	miRNA	Gm24973	ENSMUST00000175588	miRNA		X	-1	92989195	101
ENSMUSG00000064758	snRNA	Gm26331	ENSMUST00000082824	snRNA		8	-1	89589541	107
ENSMUSG00000077426	snoRNA	Gm26387	ENSMUST00000104238	snoRNA		5	1	107907345	132
ENSMUSG00000094983	miRNA	Gm23726	ENSMUST00000178937	miRNA		3	1	18069326	67
ENSMUSG00000092686	miRNA	Gm25745	ENSMUST00000174945	miRNA		10	-1	86705448	133
ENSMUSG00000088620	snRNA	Gm23032	ENSMUST00000157995	snRNA		1	-1	31656738	107
ENSMUSG00000093128	miRNA	Gm24369	ENSMUST00000175387	miRNA		14	1	109951399	96
ENSMUSG00000105205	miRNA	Gm44301	ENSMUST00000200362	miRNA		2	1	172176782	143
ENSMUSG00000095333	snoRNA	Gm24314	ENSMUST00000158274	snoRNA		5	-1	87764801	123
ENSMUSG00000077274	snoRNA	Gm22786	ENSMUST00000104086	snoRNA		1	1	86087301	122
ENSMUSG00000092806	miRNA	Gm26463	ENSMUST00000175065	miRNA		5	-1	151702468	101
ENSMUSG00000065551	miRNA	Mir210	ENSMUST00000083617	miRNA		7	-1	141221493	110
ENSMUSG00000065446	miRNA	Mir139	ENSMUST00000083512	miRNA		7	1	101475376	68
ENSMUSG00000077248	snRNA	Gm23275	ENSMUST00000104060	snRNA		9	1	3395439	104
ENSMUSG00000098647	miRNA	CAAA01064564.1	ENSMUST00000184505	miRNA		GL456381.1	-1	16721	99
ENSMUSG00000088526	snRNA	Gm26087	ENSMUST00000157901	snRNA		4	-1	39981558	62
ENSMUSG00000064860	rRNA	n-R5s220	ENSMUST00000082926	rRNA		1	-1	154311527	120
ENSMUSG00000064843	snRNA	Gm26207	ENSMUST00000082909	snRNA		19	-1	25454063	104
ENSMUSG00000094093	snoRNA	Gm25647	ENSMUST00000101832	snoRNA		7	-1	59524105	78
ENSMUSG00000098862	miRNA	Mir6378	ENSMUST00000183357	miRNA		3	-1	34922651	107
ENSMUSG00000065312	snRNA	Gm26063	ENSMUST00000083378	snRNA		15	-1	46151804	107
ENSMUSG00000098628	misc_RNA	Gm27976	ENSMUST00000183635	misc_RNA		12	1	103128189	162
ENSMUSG00000088862	snRNA	Gm23066	ENSMUST00000158237	snRNA		16	1	23425651	71
ENSMUSG00000089321	snRNA	Gm22523	ENSMUST00000158696	snRNA		4	-1	133883498	100
ENSMUSG00000089588	misc_RNA	Gm23548	ENSMUST00000158963	misc_RNA		4	1	123490231	106
ENSMUSG00000094467	miRNA	Gm24307	ENSMUST00000178512	miRNA		6	1	149576461	101
ENSMUSG00000105524	miRNA	Mir3065	ENSMUST00000198674	miRNA		11	1	120014767	87
ENSMUSG00000065881	snRNA	Gm22866	ENSMUST00000083947	snRNA		9	1	90351995	177
ENSMUSG00000078017	miRNA	Mir883a	ENSMUST00000104824	miRNA		X	-1	66780833	76
ENSMUSG00000065417	miRNA	Mir340	ENSMUST00000083483	miRNA		11	1	50069702	98
ENSMUSG00000064553	snRNA	Gm24622	ENSMUST00000082619	snRNA		X	-1	106587642	162
ENSMUSG00000106479	miRNA	Mir721	ENSMUST00000200230	miRNA		5	-1	136375803	88
ENSMUSG00000065581	miRNA	Mir194-1	ENSMUST00000083647	miRNA		1	1	185313319	67
ENSMUSG00000098958	miRNA	Mir6933	ENSMUST00000184982	miRNA		11	1	118002270	81
ENSMUSG00000099149	miRNA	Mir6370	ENSMUST00000183510	miRNA		6	1	19555342	120
ENSMUSG00000087873	snRNA	Gm26099	ENSMUST00000157248	snRNA		X	-1	37060354	109
ENSMUSG00000065555	miRNA	Mir219a-1	ENSMUST00000083621	miRNA		17	-1	34025092	110
ENSMUSG00000088417	rRNA	Gm24238	ENSMUST00000157792	rRNA		18	1	19856885	98
ENSMUSG00000099140	miRNA	Mir7237	ENSMUST00000184699	miRNA		8	1	121978024	63
ENSMUSG00000099303	miRNA	Gm27458	ENSMUST00000185108	miRNA		1	-1	178363521	121
ENSMUSG00000088992	snRNA	Gm22769	ENSMUST00000158367	snRNA		16	-1	63747534	98
ENSMUSG00000077447	snoRNA	Gm23129	ENSMUST00000104259	snoRNA		15	-1	94987138	132
ENSMUSG00000092124	protein_coding	B930094E09Rik	ENSMUST00000164667	protein_coding	principal1	18	1	31609512	1240
ENSMUSG00000098957	miRNA	Mir8105	ENSMUST00000184718	miRNA		10	1	128458680	89
ENSMUSG00000087829	misc_RNA	Gm22277	ENSMUST00000157204	misc_RNA		17	1	67551607	277
ENSMUSG00000089591	snoRNA	Gm24352	ENSMUST00000158966	snoRNA		4	1	118980318	125
ENSMUSG00000093362	miRNA	Gm22802	ENSMUST00000175621	miRNA		14	1	111282046	89
ENSMUSG00000065887	rRNA	n-R5s185	ENSMUST00000083953	rRNA		4	1	53860652	119
ENSMUSG00000077376	snoRNA	Gm25167	ENSMUST00000104188	snoRNA		3	-1	87582791	120
ENSMUSG00000098623	miRNA	Mir8112	ENSMUST00000184382	miRNA		6	1	71271671	131
ENSMUSG00000096296	snoRNA	Snord88c	ENSMUST00000116853	snoRNA		7	1	44249852	90
ENSMUSG00000084746	misc_RNA	Gm25292	ENSMUST00000122797	misc_RNA		16	-1	84620128	322
ENSMUSG00000076128	miRNA	Mir686	ENSMUST00000102174	miRNA		14	-1	54616785	109
ENSMUSG00000077641	snoRNA	Gm24987	ENSMUST00000104453	snoRNA		18	-1	87925564	134
ENSMUSG00000064859	snRNA	Gm24524	ENSMUST00000082925	snRNA		5	1	86079766	170
ENSMUSG00000093202	miRNA	Mir3547	ENSMUST00000175461	miRNA		17	-1	25245638	88
ENSMUSG00000095319	snRNA	Gm25465	ENSMUST00000157716	snRNA		16	1	36359218	105
ENSMUSG00000065684	snRNA	Gm23733	ENSMUST00000083750	snRNA		3	-1	120317989	106
ENSMUSG00000099293	miRNA	Mir6366	ENSMUST00000184472	miRNA		16	-1	18165170	82
ENSMUSG00000084530	misc_RNA	AC137708.1	ENSMUST00000122581	misc_RNA		3	1	34638368	272
ENSMUSG00000096855	rRNA	n-R5s120	ENSMUST00000180000	rRNA		8	-1	123572828	119
ENSMUSG00000084461	snRNA	Gm22958	ENSMUST00000122512	snRNA		10	1	123432566	184
ENSMUSG00000096324	snoRNA	Gm26336	ENSMUST00000179449	snoRNA		7	-1	59488767	79
ENSMUSG00000092764	snoRNA	Gm23362	ENSMUST00000175023	snoRNA		5	1	149145724	98
ENSMUSG00000076976	miRNA	Mir297c	ENSMUST00000103788	miRNA		2	1	10509016	98
ENSMUSG00000088031	misc_RNA	Gm24990	ENSMUST00000157406	misc_RNA		6	-1	83592143	323
ENSMUSG00000077471	snRNA	Gm24788	ENSMUST00000104283	snRNA		1	-1	65001462	156
ENSMUSG00000084669	snRNA	Gm23206	ENSMUST00000122720	snRNA		13	-1	30148381	184
ENSMUSG00000092878	miRNA	Gm25642	ENSMUST00000175137	miRNA		X	-1	38752127	66
ENSMUSG00000105874	miRNA	Gm44344	ENSMUST00000200287	miRNA		13	-1	23934835	129
ENSMUSG00000088818	misc_RNA	Gm22389	ENSMUST00000158193	misc_RNA		18	1	16033746	301
ENSMUSG00000077111	miRNA	Mir18b	ENSMUST00000103923	miRNA		X	-1	52742413	83
ENSMUSG00000094610	snoRNA	Gm23076	ENSMUST00000179082	snoRNA		7	-1	59449321	79
ENSMUSG00000080474	miRNA	Gm25317	ENSMUST00000116824	miRNA		4	-1	135512479	129
ENSMUSG00000088657	snRNA	Gm24847	ENSMUST00000158032	snRNA		8	1	59559315	108
ENSMUSG00000094308	snoRNA	Gm24926	ENSMUST00000178053	snoRNA		7	-1	59477571	79
ENSMUSG00000077368	snoRNA	Gm26273	ENSMUST00000104180	snoRNA		1	-1	13774464	131
ENSMUSG00000064959	rRNA	n-R5s41	ENSMUST00000083025	rRNA		15	1	82342653	119
ENSMUSG00000098811	miRNA	Mir6913	ENSMUST00000184244	miRNA		10	1	81386347	66
ENSMUSG00000093059	misc_RNA	Gm24809	ENSMUST00000175318	misc_RNA		X	-1	37072262	271
ENSMUSG00000084479	snRNA	Gm26424	ENSMUST00000122530	snRNA		4	1	49474307	104
ENSMUSG00000076286	miRNA	Mir672	ENSMUST00000102331	miRNA		X	-1	104116274	100
ENSMUSG00000065622	snRNA	Gm24763	ENSMUST00000083688	snRNA		X	1	43254046	190
ENSMUSG00000065851	snRNA	Gm22352	ENSMUST00000083917	snRNA		2	1	125105009	107
ENSMUSG00000105477	miRNA	Gm47307	ENSMUST00000198489	miRNA		17	1	91088406	145
ENSMUSG00000064692	snoRNA	Gm24151	ENSMUST00000082758	snoRNA		11	1	62776985	141
ENSMUSG00000093026	miRNA	Gm25301	ENSMUST00000175285	miRNA		18	1	61397813	113
ENSMUSG00000098394	misc_RNA	Gm27999	ENSMUST00000183539	misc_RNA		10	-1	92075361	193
ENSMUSG00000089158	misc_RNA	Gm23583	ENSMUST00000158533	misc_RNA		1	-1	192998574	289
ENSMUSG00000104844	miRNA	Gm47276	ENSMUST00000198352	miRNA		16	1	41217777	60
ENSMUSG00000087887	snoRNA	Gm23598	ENSMUST00000157262	snoRNA		2	1	150883723	144
ENSMUSG00000087764	ribozyme	Gm23984	ENSMUST00000157139	ribozyme		1	1	45772962	203
ENSMUSG00000089251	misc_RNA	Gm25714	ENSMUST00000158626	misc_RNA		3	1	43925569	296
ENSMUSG00000089077	snRNA	Gm24501	ENSMUST00000158452	snRNA		3	-1	85962832	62
ENSMUSG00000076246	miRNA	Gm22256	ENSMUST00000102291	miRNA		13	1	62466865	107
ENSMUSG00000092833	miRNA	Gm24823	ENSMUST00000175092	miRNA		2	-1	144618233	91
ENSMUSG00000080459	miRNA	Mir669g	ENSMUST00000116809	miRNA		2	1	10477150	123
ENSMUSG00000096689	snRNA	Gm25987	ENSMUST00000083234	snRNA		15	1	68671416	107
ENSMUSG00000093897	miRNA	Gm26268	ENSMUST00000177685	miRNA		16	1	10965724	126
ENSMUSG00000077443	snRNA	Gm23133	ENSMUST00000104255	snRNA		15	-1	99937441	135
ENSMUSG00000077459	snoRNA	Gm25919	ENSMUST00000104271	snoRNA		3	-1	67573291	132
ENSMUSG00000096710	rRNA	n-R5s117	ENSMUST00000179431	rRNA		8	-1	123567755	119
ENSMUSG00000065578	miRNA	Mir181b-2	ENSMUST00000083644	miRNA		2	1	38853830	89
ENSMUSG00000088810	snoRNA	Gm22382	ENSMUST00000158185	snoRNA		9	1	68280574	130
ENSMUSG00000093065	miRNA	Gm23154	ENSMUST00000175324	miRNA		4	1	87432272	65
ENSMUSG00000096473	snoRNA	Gm24463	ENSMUST00000178417	snoRNA		9	1	89075336	72
ENSMUSG00000089603	snRNA	Gm23059	ENSMUST00000158978	snRNA		12	1	60735498	107
ENSMUSG00000095323	miRNA	Mir3470a	ENSMUST00000175223	miRNA		6	-1	83090387	77
ENSMUSG00000098865	sRNA	Gm27702	ENSMUST00000184512	sRNA		19	-1	5824707	56
ENSMUSG00000089017	snoRNA	Gm25519	ENSMUST00000158392	snoRNA		3	-1	112199041	127
ENSMUSG00000087766	snRNA	Gm23982	ENSMUST00000157141	snRNA		6	1	42832779	106
ENSMUSG00000105133	miRNA	Gm44320	ENSMUST00000199276	miRNA		2	-1	97627052	86
ENSMUSG00000087981	misc_RNA	Gm22227	ENSMUST00000157356	misc_RNA		8	-1	26240408	259
ENSMUSG00000096019	snoRNA	Gm26504	ENSMUST00000102033	snoRNA		7	-1	59676081	94
ENSMUSG00000098334	miRNA	Mir7043	ENSMUST00000184219	miRNA		6	-1	116646047	70
ENSMUSG00000099130	misc_RNA	Gm27602	ENSMUST00000183861	misc_RNA		5	-1	111275094	111
ENSMUSG00000064719	snRNA	Gm25930	ENSMUST00000082785	snRNA		11	1	53390402	107
ENSMUSG00000088252	snoRNA	Snord13	ENSMUST00000157627	snoRNA		8	-1	31149967	104
ENSMUSG00000070150	rRNA	n-R5s152	ENSMUST00000093641	rRNA		7	-1	20010202	119
ENSMUSG00000089141	misc_RNA	Gm23409	ENSMUST00000158516	misc_RNA		1	1	37973967	237
ENSMUSG00000087799	rRNA	Gm25961	ENSMUST00000157174	rRNA		6	-1	89249602	135
ENSMUSG00000065905	snRNA	Gm26110	ENSMUST00000083971	snRNA		1	1	171027965	165
ENSMUSG00000088458	snRNA	Gm26373	ENSMUST00000157833	snRNA		6	1	21128156	103
ENSMUSG00000080624	miRNA	Gm22678	ENSMUST00000116974	miRNA		2	1	10506755	101
ENSMUSG00000093864	snRNA	Gm22633	ENSMUST00000179834	snRNA		1	1	12374936	107
ENSMUSG00000089472	rRNA	Gm25368	ENSMUST00000158847	rRNA		2	1	21171083	131
ENSMUSG00000106081	miRNA	Gm47280	ENSMUST00000200651	miRNA		1	1	36506562	141
ENSMUSG00000065206	snRNA	Gm24611	ENSMUST00000083272	snRNA		6	-1	42337783	107
ENSMUSG00000084725	snRNA	Gm24141	ENSMUST00000122776	snRNA		9	1	74362610	115
ENSMUSG00000064698	snRNA	Gm24152	ENSMUST00000082764	snRNA		4	-1	9695807	163
ENSMUSG00000096186	snRNA	Gm23306	ENSMUST00000179058	snRNA		16	-1	36285537	105
ENSMUSG00000096328	snoRNA	Gm26337	ENSMUST00000178000	snoRNA		7	-1	59423133	79
ENSMUSG00000093015	miRNA	Gm22463	ENSMUST00000175274	miRNA		1	-1	5644745	101
ENSMUSG00000077448	snoRNA	Gm23126	ENSMUST00000104260	snoRNA		1	-1	42866818	134
ENSMUSG00000077612	snoRNA	Gm25498	ENSMUST00000104424	snoRNA		14	1	33207152	129
ENSMUSG00000093823	miRNA	Gm24802	ENSMUST00000178897	miRNA		1	1	195228278	121
ENSMUSG00000099186	miRNA	Gm27878	ENSMUST00000184000	miRNA		4	-1	3051819	106
ENSMUSG00000105927	miRNA	Gm44457	ENSMUST00000198109	miRNA		2	1	19888653	76
ENSMUSG00000104618	miRNA	Mir1839	ENSMUST00000196359	miRNA		7	1	81529916	73
ENSMUSG00000084753	snRNA	Gm22452	ENSMUST00000122804	snRNA		13	1	23663021	104
ENSMUSG00000098514	miRNA	Gm27663	ENSMUST00000184839	miRNA		Y	1	5542752	110
ENSMUSG00000098455	miRNA	Gm27428	ENSMUST00000184289	miRNA		X	1	106426057	110
ENSMUSG00000076234	miRNA	Gm22757	ENSMUST00000102279	miRNA		2	1	103839109	96
ENSMUSG00000084565	miRNA	Mir1901	ENSMUST00000122616	miRNA		18	-1	11840438	78
ENSMUSG00000098765	miRNA	Mir7685	ENSMUST00000183555	miRNA		2	-1	158243565	62
ENSMUSG00000065255	snoRNA	Gm23974	ENSMUST00000083321	snoRNA		1	1	45746895	131
ENSMUSG00000089030	misc_RNA	Gm22160	ENSMUST00000158405	misc_RNA		X	1	100749421	328
ENSMUSG00000088084	snoRNA	Gm25342	ENSMUST00000157459	snoRNA		10	-1	106056079	122
ENSMUSG00000088939	misc_RNA	Gm25925	ENSMUST00000158314	misc_RNA		12	-1	17645205	306
ENSMUSG00000088377	snoRNA	Gm25183	ENSMUST00000157752	snoRNA		15	-1	99133172	106
ENSMUSG00000089194	snoRNA	Gm25769	ENSMUST00000158569	snoRNA		4	1	73114657	127
ENSMUSG00000088953	snoRNA	Gm24942	ENSMUST00000158328	snoRNA		1	1	63032706	114
ENSMUSG00000070108	miRNA	Mir500	ENSMUST00000093600	miRNA		X	-1	7237774	92
ENSMUSG00000094636	snoRNA	Gm24219	ENSMUST00000179861	snoRNA		7	-1	59529721	79
ENSMUSG00000080363	miRNA	Gm25778	ENSMUST00000116713	miRNA		7	1	128826347	121
ENSMUSG00000065145	misc_RNA	Vaultrc5	ENSMUST00000083211	misc_RNA		18	1	36801866	143
ENSMUSG00000088460	rRNA	Gm24747	ENSMUST00000157835	rRNA		8	1	72111234	87
ENSMUSG00000088578	snoRNA	Gm25459	ENSMUST00000157953	snoRNA		5	-1	22359277	114
ENSMUSG00000065305	snoRNA	Gm23246	ENSMUST00000083371	snoRNA		19	1	8725594	67
ENSMUSG00000098380	miRNA	Mir6939	ENSMUST00000184981	miRNA		12	-1	112659351	75
ENSMUSG00000093830	snoRNA	Gm23145	ENSMUST00000178912	snoRNA		7	-1	59425002	79
ENSMUSG00000104797	miRNA	Mir1897	ENSMUST00000198006	miRNA		3	1	34638464	79
ENSMUSG00000089247	snoRNA	Gm24051	ENSMUST00000158622	snoRNA		11	-1	8005016	75
ENSMUSG00000089365	snoRNA	Gm23823	ENSMUST00000158740	snoRNA		14	-1	77540765	124
ENSMUSG00000093327	miRNA	Mir5107	ENSMUST00000175586	miRNA		18	1	60812076	88
ENSMUSG00000087872	misc_RNA	Gm26098	ENSMUST00000157247	misc_RNA		13	-1	16859472	288
ENSMUSG00000087835	snRNA	Gm24481	ENSMUST00000157210	snRNA		3	-1	92949259	102
ENSMUSG00000093245	snoRNA	Gm50449	ENSMUST00000175504	snoRNA		10	1	128085289	72
ENSMUSG00000065701	misc_RNA	Rny1	ENSMUST00000083767	misc_RNA		6	-1	47788180	112
ENSMUSG00000096172	miRNA	Gm22992	ENSMUST00000179496	miRNA		1	1	166620362	121
ENSMUSG00000077383	snoRNA	Gm22659	ENSMUST00000104195	snoRNA		9	1	46562974	130
ENSMUSG00000094537	rRNA	n-R5s106	ENSMUST00000179060	rRNA		8	-1	123549074	119
ENSMUSG00000099301	miRNA	Mir3473e	ENSMUST00000183932	miRNA		5	-1	31667340	110
ENSMUSG00000093745	misc_RNA	Gm24420	ENSMUST00000176676	misc_RNA		9	-1	42520831	59
ENSMUSG00000064569	snoRNA	Gm25592	ENSMUST00000082635	snoRNA		3	1	108034026	131
ENSMUSG00000088813	misc_RNA	Gm22383	ENSMUST00000158188	misc_RNA		1	-1	172684841	327
ENSMUSG00000065465	miRNA	Mir33	ENSMUST00000083531	miRNA		15	1	82198122	69
ENSMUSG00000096680	protein_coding	AC164084.3	ENSMUST00000177991	protein_coding		JH584296.1	-1	133448	1443
ENSMUSG00000105415	miRNA	Gm44364	ENSMUST00000198368	miRNA		6	-1	136808683	141
ENSMUSG00000105581	miRNA	Gm44393	ENSMUST00000197418	miRNA		15	1	101557197	138
ENSMUSG00000093159	miRNA	Gm25037	ENSMUST00000175418	miRNA		5	-1	4854423	110
ENSMUSG00000093300	rRNA	Gm23799	ENSMUST00000175559	rRNA		12	-1	56056755	120
ENSMUSG00000106360	miRNA	Gm44338	ENSMUST00000198614	miRNA		13	1	90760112	110
ENSMUSG00000094833	snRNA	Gm25473	ENSMUST00000180191	snRNA		5	-1	86236961	107
ENSMUSG00000080424	miRNA	Mir466k	ENSMUST00000116774	miRNA		3	1	85467377	122
ENSMUSG00000087942	snoRNA	Gm24244	ENSMUST00000157317	snoRNA		17	-1	91812620	130
ENSMUSG00000088155	snoRNA	Gm26349	ENSMUST00000157530	snoRNA		13	1	118036614	130
ENSMUSG00000065491	miRNA	Mir7b	ENSMUST00000083557	miRNA		17	1	56242988	111
ENSMUSG00000076372	miRNA	Mir568	ENSMUST00000102417	miRNA		16	1	43640655	83
ENSMUSG00000088527	misc_RNA	Gm26086	ENSMUST00000157902	misc_RNA		13	-1	43052410	263
ENSMUSG00000092885	miRNA	Gm22123	ENSMUST00000175144	miRNA		11	-1	6472277	53
ENSMUSG00000076455	miRNA	Mir767	ENSMUST00000103256	miRNA		X	-1	72590094	107
ENSMUSG00000073753	pseudogene	Gm10571	ENSMUST00000097869	pseudogene		4	1	129855071	1638
ENSMUSG00000105567	miRNA	Gm44305	ENSMUST00000199946	miRNA		12	-1	16767223	97
ENSMUSG00000079286	protein_coding	Gm11084	ENSMUST00000112062	protein_coding	principal1	2	-1	72986716	69
ENSMUSG00000088132	rRNA	Gm22586	ENSMUST00000157507	rRNA		8	1	64161405	122
ENSMUSG00000077683	snoRNA	Gm22494	ENSMUST00000104495	snoRNA		7	1	62611657	128
ENSMUSG00000073291	protein_coding	Gm10491	ENSMUST00000085330	protein_coding	principal1	X	-1	7907835	117
ENSMUSG00000098403	miRNA	Gm27415	ENSMUST00000183720	miRNA		16	1	31261505	95
ENSMUSG00000094661	protein_coding	Ccl19	ENSMUST00000118540	protein_coding		JH584294.1	-1	104139	327
ENSMUSG00000077635	snoRNA	Gm22150	ENSMUST00000104447	snoRNA		4	-1	55469159	135
ENSMUSG00000080511	miRNA	Gm22195	ENSMUST00000116861	miRNA		9	-1	4271237	108
ENSMUSG00000077065	miRNA	Gm25040	ENSMUST00000103877	miRNA		11	-1	118852788	66
ENSMUSG00000094565	snoRNA	Gm25229	ENSMUST00000178587	snoRNA		7	-1	59414169	79
ENSMUSG00000065435	miRNA	Mir135b	ENSMUST00000083501	miRNA		1	1	132198088	97
ENSMUSG00000065883	snoRNA	Gm22865	ENSMUST00000083949	snoRNA		2	1	121004089	214
ENSMUSG00000064734	snRNA	Gm23445	ENSMUST00000082800	snRNA		7	-1	126915826	107
ENSMUSG00000092913	miRNA	Gm24085	ENSMUST00000175172	miRNA		17	-1	12865240	116
ENSMUSG00000094167	pseudogene	Gm10580	ENSMUST00000097985	pseudogene		4	-1	88774720	396
ENSMUSG00000098254	misc_RNA	Gm27611	ENSMUST00000184690	misc_RNA		3	1	34653178	108
ENSMUSG00000058567	pseudogene	Gm2531	ENSMUST00000075609	pseudogene		18	-1	10145965	512
ENSMUSG00000065680	snoRNA	Snord38a	ENSMUST00000083746	snoRNA		4	-1	117154584	71
ENSMUSG00000089229	ribozyme	Gm25043	ENSMUST00000158604	ribozyme		13	1	33567794	212
ENSMUSG00000089015	snRNA	Gm24996	ENSMUST00000158390	snRNA		2	-1	75686838	99
ENSMUSG00000095652	rRNA	n-R5s123	ENSMUST00000178804	rRNA		8	-1	123577873	119
ENSMUSG00000089578	misc_RNA	Gm25971	ENSMUST00000158953	misc_RNA		4	1	18708748	286
ENSMUSG00000096236	protein_coding	AC165294.2	ENSMUST00000177853	protein_coding		JH584297.1	1	31101	1221
ENSMUSG00000096043	snRNA	Gm24968	ENSMUST00000179817	snRNA		16	-1	71174928	107
ENSMUSG00000070236	snRNA	Gm26327	ENSMUST00000093724	snRNA		7	1	39630392	111
ENSMUSG00000098466	misc_RNA	Gm27350	ENSMUST00000185109	misc_RNA		12	1	109603882	98
ENSMUSG00000065041	snoRNA	Gm24044	ENSMUST00000083107	snoRNA		9	1	120128780	156
ENSMUSG00000076122	miRNA	Mir503	ENSMUST00000102168	miRNA		X	-1	53054054	71
ENSMUSG00000093373	miRNA	Gm23075	ENSMUST00000175632	miRNA		19	-1	35276522	70
ENSMUSG00000096219	rRNA	n-R5s93	ENSMUST00000180091	rRNA		8	-1	5069377	119
ENSMUSG00000104561	miRNA	Mir466c-1	ENSMUST00000200654	miRNA		2	1	10481534	84
ENSMUSG00000065303	snRNA	Gm23249	ENSMUST00000083369	snRNA		12	1	93746502	161
ENSMUSG00000096885	protein_coding	Gm21797	ENSMUST00000177579	protein_coding	principal1	Y	-1	40775765	543
ENSMUSG00000089285	misc_RNA	Gm26028	ENSMUST00000158660	misc_RNA		18	-1	59738357	294
ENSMUSG00000063586	processed_pseudogene	Gm5513	ENSMUST00000072982	processed_pseudogene		19	-1	14960766	1218
ENSMUSG00000095019	protein_coding	AC234645.1	ENSMUST00000178569	protein_coding		JH584303.1	1	81607	1083
ENSMUSG00000093944	snoRNA	Gm22833	ENSMUST00000158292	snoRNA		6	-1	123424687	132
ENSMUSG00000065866	snRNA	Gm24032	ENSMUST00000083932	snRNA		13	-1	95897120	159
ENSMUSG00000098818	rRNA	Gm27783	ENSMUST00000183534	rRNA		10	-1	41408277	105
ENSMUSG00000099206	snRNA	Gm27942	ENSMUST00000184669	snRNA		2	1	84703262	101
ENSMUSG00000089248	misc_RNA	Gm24050	ENSMUST00000158623	misc_RNA		5	-1	118211342	290
ENSMUSG00000096721	miRNA	Gm25942	ENSMUST00000180080	miRNA		6	1	22789818	110
ENSMUSG00000064405	snoRNA	Gm23925	ENSMUST00000082471	snoRNA		2	-1	158359929	132
ENSMUSG00000099117	misc_RNA	Gm27404	ENSMUST00000184656	misc_RNA		2	1	45113313	103
ENSMUSG00000088296	snRNA	Gm26409	ENSMUST00000157671	snRNA		9	1	111075394	63
ENSMUSG00000076051	miRNA	Mir707	ENSMUST00000102096	miRNA		7	1	44849699	73
ENSMUSG00000104594	miRNA	Gm24022	ENSMUST00000196624	miRNA		12	-1	113424783	60
ENSMUSG00000092896	miRNA	Gm23811	ENSMUST00000175155	miRNA		9	-1	4456023	84
ENSMUSG00000098606	miRNA	Mir6903	ENSMUST00000183597	miRNA		1	-1	133726645	88
ENSMUSG00000076451	miRNA	Mir770	ENSMUST00000103252	miRNA		12	1	109563692	94
ENSMUSG00000096398	miRNA	Gm23689	ENSMUST00000180354	miRNA		16	1	5223364	110
ENSMUSG00000098750	scaRNA	Gm27653	ENSMUST00000185037	scaRNA		2	-1	156964293	136
ENSMUSG00000089007	snoRNA	Gm23877	ENSMUST00000158382	snoRNA		2	-1	11014890	129
ENSMUSG00000090889	protein_coding	Gm17428	ENSMUST00000085949	protein_coding	principal1	14	1	54976933	93
ENSMUSG00000098964	miRNA	Gm27700	ENSMUST00000185003	miRNA		17	1	24010032	81
ENSMUSG00000093856	snRNA	Gm24311	ENSMUST00000082570	snRNA		5	1	144013998	104
ENSMUSG00000088326	misc_RNA	Gm25667	ENSMUST00000157701	misc_RNA		17	-1	32956884	275
ENSMUSG00000077298	snoRNA	Gm24127	ENSMUST00000104110	snoRNA		14	-1	92368629	130
ENSMUSG00000089103	rRNA	Gm23114	ENSMUST00000158478	rRNA		11	-1	23626861	117
ENSMUSG00000089109	ribozyme	Gm23916	ENSMUST00000158484	ribozyme		16	-1	33140248	399
ENSMUSG00000093101	miRNA	Gm25533	ENSMUST00000175360	miRNA		7	-1	61673907	79
ENSMUSG00000078240	protein_coding	Gm3550	ENSMUST00000105038	protein_coding	principal1	18	1	34736359	1656
ENSMUSG00000084522	snRNA	Gm25819	ENSMUST00000122573	snRNA		11	1	68996002	84
ENSMUSG00000077302	snoRNA	Gm22473	ENSMUST00000104114	snoRNA		4	-1	6634295	132
ENSMUSG00000099018	miRNA	Gm27360	ENSMUST00000183487	miRNA		X	1	6071478	80
ENSMUSG00000105682	miRNA	Gm44323	ENSMUST00000198689	miRNA		15	1	101710274	129
ENSMUSG00000094158	snRNA	Gm23264	ENSMUST00000083372	snRNA		17	1	66086094	107
ENSMUSG00000098752	miRNA	Mir6897	ENSMUST00000184790	miRNA		1	-1	36144313	62
ENSMUSG00000077218	snoRNA	Gm23948	ENSMUST00000104030	snoRNA		12	-1	65562294	132
ENSMUSG00000088697	snoRNA	Gm22332	ENSMUST00000158072	snoRNA		X	1	68563127	126
ENSMUSG00000099185	miRNA	Mir7662	ENSMUST00000184761	miRNA		10	-1	62194227	61
ENSMUSG00000088675	ribozyme	Rprl1	ENSMUST00000158050	ribozyme		6	-1	69327170	327
ENSMUSG00000099321	miRNA	Mir6404	ENSMUST00000183699	miRNA		7	1	143933115	94
ENSMUSG00000088853	snoRNA	Gm24730	ENSMUST00000158228	snoRNA		17	1	63202738	117
ENSMUSG00000099101	miRNA	Mir7653	ENSMUST00000184358	miRNA		11	1	78178827	61
ENSMUSG00000077653	snoRNA	Gm23321	ENSMUST00000104465	snoRNA		7	-1	119306248	126
ENSMUSG00000088614	snRNA	Gm26001	ENSMUST00000157989	snRNA		4	1	136137496	103
ENSMUSG00000098838	miRNA	Mir381	ENSMUST00000083632	miRNA		12	1	109726822	75
ENSMUSG00000095997	snoRNA	Gm24702	ENSMUST00000178965	snoRNA		7	-1	59494378	79
ENSMUSG00000080455	miRNA	Gm24194	ENSMUST00000116805	miRNA		17	-1	64321615	90
ENSMUSG00000088269	rRNA	Gm24777	ENSMUST00000157644	rRNA		16	-1	97499022	107
ENSMUSG00000064642	snoRNA	Gm23299	ENSMUST00000082708	snoRNA		8	-1	121666706	79
ENSMUSG00000077613	snoRNA	Gm25497	ENSMUST00000104425	snoRNA		12	-1	41348572	132
ENSMUSG00000065078	snRNA	Gm24536	ENSMUST00000083144	snRNA		6	1	29963555	107
ENSMUSG00000096306	snoRNA	Gm25209	ENSMUST00000179576	snoRNA		7	-1	59542820	79
ENSMUSG00000077620	rRNA	n-R5s9	ENSMUST00000104432	rRNA		X	1	83345743	117
ENSMUSG00000088651	snoRNA	Gm24853	ENSMUST00000158026	snoRNA		12	1	81501240	121
ENSMUSG00000084572	misc_RNA	Gm23657	ENSMUST00000122623	misc_RNA		17	-1	46992916	294
ENSMUSG00000022591	protein_coding	Gm9747	ENSMUST00000023262	protein_coding	principal1	1	1	82233112	2822
ENSMUSG00000080524	snRNA	Gm23879	ENSMUST00000116874	snRNA		1	-1	69955129	126
ENSMUSG00000094625	snoRNA	Gm22524	ENSMUST00000178357	snoRNA		7	-1	59462626	79
ENSMUSG00000089371	miRNA	Mir1938	ENSMUST00000158746	miRNA		12	-1	40222811	100
ENSMUSG00000088408	snRNA	Gm25881	ENSMUST00000157783	snRNA		2	1	163514516	103
ENSMUSG00000065689	rRNA	n-R5s7	ENSMUST00000083755	rRNA		X	-1	68949684	121
ENSMUSG00000099155	miRNA	Gm27805	ENSMUST00000184513	miRNA		2	1	32173171	79
ENSMUSG00000084616	snRNA	Gm25047	ENSMUST00000122667	snRNA		X	1	36363899	104
ENSMUSG00000095155	snoRNA	Gm26032	ENSMUST00000178535	snoRNA		7	-1	59741466	94
ENSMUSG00000095757	miRNA	Gm24180	ENSMUST00000179961	miRNA		1	-1	43918886	110
ENSMUSG00000084440	snRNA	Gm26254	ENSMUST00000122491	snRNA		4	-1	31998741	118
ENSMUSG00000088995	snRNA	Gm22764	ENSMUST00000158370	snRNA		14	-1	111966048	92
ENSMUSG00000096876	miRNA	Gm23936	ENSMUST00000179354	miRNA		4	1	120837488	110
ENSMUSG00000065498	miRNA	Mir379	ENSMUST00000083564	miRNA		12	1	109709060	66
ENSMUSG00000084729	misc_RNA	Gm24139	ENSMUST00000122780	misc_RNA		5	1	134204469	288
ENSMUSG00000094943	miRNA	Gm25753	ENSMUST00000116792	miRNA		2	1	10502391	121
ENSMUSG00000065501	miRNA	Mir335	ENSMUST00000083567	miRNA		6	1	30741299	98
ENSMUSG00000077177	snoRNA	Gm25760	ENSMUST00000103989	snoRNA		12	1	56551459	132
ENSMUSG00000070203	snRNA	Gm22444	ENSMUST00000093693	snRNA		7	1	52927070	108
ENSMUSG00000093763	miRNA	Mir5626	ENSMUST00000176002	miRNA		9	-1	70405753	60
ENSMUSG00000096819	protein_coding	Srsy	ENSMUST00000179900	protein_coding	principal1	Y	-1	17937330	1618
ENSMUSG00000065795	snRNA	Gm25513	ENSMUST00000083861	snRNA		5	-1	55303581	162
ENSMUSG00000093161	miRNA	Gm22183	ENSMUST00000175420	miRNA		10	1	126036827	73
ENSMUSG00000089281	scaRNA	Scarna6	ENSMUST00000158656	scaRNA		1	1	87784556	265
ENSMUSG00000077339	snoRNA	Gm23010	ENSMUST00000104151	snoRNA		6	1	39013666	126
ENSMUSG00000095297	miRNA	Gm25381	ENSMUST00000102078	miRNA		15	-1	39308578	109
ENSMUSG00000098315	miRNA	Mir21b	ENSMUST00000184317	miRNA		3	1	29636744	108
ENSMUSG00000095856	miRNA	Gm22619	ENSMUST00000179516	miRNA		4	-1	93745997	110
ENSMUSG00000089230	snRNA	Gm22203	ENSMUST00000158605	snRNA		7	-1	38176671	58
ENSMUSG00000084457	rRNA	n-R5s73	ENSMUST00000122508	rRNA		11	-1	98273366	107
ENSMUSG00000088587	snoRNA	Gm22962	ENSMUST00000157962	snoRNA		9	1	68510163	73
ENSMUSG00000065280	snoRNA	Gm24453	ENSMUST00000083346	snoRNA		19	1	8724868	76
ENSMUSG00000093928	rRNA	Gm23863	ENSMUST00000178265	rRNA		Y	-1	86326124	108
ENSMUSG00000095946	miRNA	Gm25196	ENSMUST00000180171	miRNA		7	1	23406996	110
ENSMUSG00000095552	protein_coding	4933409K07Rik	ENSMUST00000179644	protein_coding		JH584293.1	1	140956	1710
ENSMUSG00000098273	miRNA	Mir6346	ENSMUST00000183982	miRNA		1	1	118954220	81
ENSMUSG00000065765	snRNA	Gm23851	ENSMUST00000083831	snRNA		6	1	124964285	103
ENSMUSG00000092761	miRNA	Mir5120	ENSMUST00000175020	miRNA		4	-1	44607568	78
ENSMUSG00000088422	misc_RNA	Gm22553	ENSMUST00000157797	misc_RNA		5	-1	79639109	295
ENSMUSG00000088760	snRNA	Gm24393	ENSMUST00000158135	snRNA		9	-1	82463452	97
ENSMUSG00000106253	miRNA	Mir468	ENSMUST00000197332	miRNA		6	-1	81896676	78
ENSMUSG00000099275	miRNA	Mir8107	ENSMUST00000184024	miRNA		9	-1	110636115	117
ENSMUSG00000105196	miRNA	Mir142	ENSMUST00000198092	miRNA		11	1	87756864	64
ENSMUSG00000093929	snoRNA	Gm23862	ENSMUST00000180342	snoRNA		7	-1	59673554	94
ENSMUSG00000098305	rRNA	Gm27781	ENSMUST00000185185	rRNA		18	1	75023856	92
ENSMUSG00000099132	snoRNA	Gm27604	ENSMUST00000182333	snoRNA		12	1	109658407	72
ENSMUSG00000098458	miRNA	Mir6971	ENSMUST00000183497	miRNA		17	-1	34841871	63
ENSMUSG00000088775	misc_RNA	Gm26037	ENSMUST00000158150	misc_RNA		1	1	89684802	311
ENSMUSG00000064500	snoRNA	Gm25296	ENSMUST00000082566	snoRNA		11	1	48800866	67
ENSMUSG00000064407	snRNA	Gm23926	ENSMUST00000082473	snRNA		14	-1	86311378	90
ENSMUSG00000106074	miRNA	Mir3969	ENSMUST00000197106	miRNA		5	-1	87595993	92
ENSMUSG00000084504	snRNA	Gm25323	ENSMUST00000122555	snRNA		4	-1	126201277	103
ENSMUSG00000092657	miRNA	Gm25240	ENSMUST00000174916	miRNA		1	-1	53443395	125
ENSMUSG00000094131	snRNA	Gm22265	ENSMUST00000082947	snRNA		1	1	192745571	116
ENSMUSG00000087807	miRNA	Gm25559	ENSMUST00000157182	miRNA		4	1	117570134	74
ENSMUSG00000087910	misc_RNA	Gm24914	ENSMUST00000157285	misc_RNA		2	1	116963237	313
ENSMUSG00000088474	misc_RNA	Gm23085	ENSMUST00000157849	misc_RNA		5	1	103602587	293
ENSMUSG00000095462	protein_coding	Gm21725	ENSMUST00000178519	protein_coding	principal1	Y	-1	13349063	543
ENSMUSG00000093981	snoRNA	Gm24862	ENSMUST00000179103	snoRNA		7	-1	59391768	79
ENSMUSG00000077175	snoRNA	Gm25758	ENSMUST00000103987	snoRNA		5	1	89828871	129
ENSMUSG00000098406	miRNA	Mir7222	ENSMUST00000183740	miRNA		2	1	92594602	75
ENSMUSG00000106561	miRNA	Gm47293	ENSMUST00000198146	miRNA		12	1	87266858	76
ENSMUSG00000077191	snoRNA	Snord64	ENSMUST00000104003	snoRNA		7	-1	59978874	67
ENSMUSG00000096239	miRNA	Mir466b-4	ENSMUST00000178801	miRNA		2	1	10486423	90
ENSMUSG00000076300	miRNA	Gm23060	ENSMUST00000102345	miRNA		19	-1	34395755	109
ENSMUSG00000080689	snoRNA	Gm23987	ENSMUST00000117039	snoRNA		15	-1	69685706	129
ENSMUSG00000098462	misc_RNA	Gm27694	ENSMUST00000184740	misc_RNA		19	-1	5799085	86
ENSMUSG00000076394	miRNA	Gm25991	ENSMUST00000102439	miRNA		11	-1	65067807	99
ENSMUSG00000088749	misc_RNA	Gm23218	ENSMUST00000158124	misc_RNA		15	1	6500697	276
ENSMUSG00000098249	misc_RNA	Gm27330	ENSMUST00000184689	misc_RNA		1	-1	50222520	132
ENSMUSG00000094050	snRNA	Gm23472	ENSMUST00000101806	snRNA		1	1	72236946	191
ENSMUSG00000080469	snoRNA	Snord98	ENSMUST00000116819	snoRNA		10	-1	62765640	65
ENSMUSG00000077199	snoRNA	Gm22266	ENSMUST00000104011	snoRNA		X	-1	104070326	138
ENSMUSG00000095501	snoRNA	Gm22449	ENSMUST00000178924	snoRNA		7	-1	59608340	79
ENSMUSG00000080507	miRNA	Gm22071	ENSMUST00000116857	miRNA		2	-1	91407136	83
ENSMUSG00000054116	protein_coding	E130116L18Rik	ENSMUST00000066954	protein_coding	principal1	5	-1	25223153	306
ENSMUSG00000065705	snRNA	Gm22829	ENSMUST00000083771	snRNA		10	-1	66170506	106
ENSMUSG00000098995	miRNA	Gm27598	ENSMUST00000185158	miRNA		11	-1	83032694	63
ENSMUSG00000065433	miRNA	Mir370	ENSMUST00000083499	miRNA		12	1	109618258	79
ENSMUSG00000077397	snoRNA	Gm24341	ENSMUST00000104209	snoRNA		4	-1	33681491	125
ENSMUSG00000099015	miRNA	Mir6372	ENSMUST00000185114	miRNA		11	1	26202240	109
ENSMUSG00000065048	snRNA	Gm24042	ENSMUST00000083114	snRNA		4	-1	25819773	103
ENSMUSG00000093031	misc_RNA	Gm22662	ENSMUST00000175290	misc_RNA		4	1	133654002	256
ENSMUSG00000080487	miRNA	Gm23492	ENSMUST00000116837	miRNA		11	1	49895731	115
ENSMUSG00000064718	snRNA	Gm25929	ENSMUST00000082784	snRNA		11	1	61334761	107
ENSMUSG00000089074	snRNA	Gm23817	ENSMUST00000158449	snRNA		12	-1	80622933	104
ENSMUSG00000064958	snRNA	Gm24921	ENSMUST00000083024	snRNA		12	1	63609868	107
ENSMUSG00000077925	miRNA	Mir453	ENSMUST00000104732	miRNA		12	1	109735619	82
ENSMUSG00000089476	snRNA	Gm25364	ENSMUST00000158851	snRNA		11	1	115601656	107
ENSMUSG00000077750	snoRNA	Gm23529	ENSMUST00000104562	snoRNA		12	-1	33452843	132
ENSMUSG00000116184	protein_coding	4632433K11Rik	ENSMUST00000076791	protein_coding	principal1	7	1	5034118	1129
ENSMUSG00000095926	snoRNA	Gm24039	ENSMUST00000157878	snoRNA		16	-1	57884139	132
ENSMUSG00000064872	snRNA	Gm23376	ENSMUST00000082938	snRNA		3	1	86930743	160
ENSMUSG00000105612	miRNA	Gm44328	ENSMUST00000199331	miRNA		8	-1	104709446	75
ENSMUSG00000093294	miRNA	Gm25399	ENSMUST00000175553	miRNA		4	1	137183987	76
ENSMUSG00000065837	snRNA	Gm23503	ENSMUST00000083903	snRNA		2	-1	63432194	107
ENSMUSG00000077358	snoRNA	Gm26293	ENSMUST00000104170	snoRNA		1	1	59692509	84
ENSMUSG00000065937	snRNA	Gm25627	ENSMUST00000084003	snRNA		3	-1	146116254	153
ENSMUSG00000084597	misc_RNA	Gm22343	ENSMUST00000122648	misc_RNA		12	1	4394482	286
ENSMUSG00000077539	snoRNA	Gm22546	ENSMUST00000104351	snoRNA		10	1	11648005	130
ENSMUSG00000093793	snoRNA	Gm24091	ENSMUST00000082550	snoRNA		4	1	130766331	83
ENSMUSG00000093243	miRNA	Gm24575	ENSMUST00000175502	miRNA		15	1	83516936	77
ENSMUSG00000065859	snRNA	Gm22351	ENSMUST00000083925	snRNA		X	-1	74713873	107
ENSMUSG00000089068	snRNA	Gm22841	ENSMUST00000158443	snRNA		8	1	53493853	62
ENSMUSG00000092958	miRNA	Mir5128	ENSMUST00000175217	miRNA		2	-1	37688284	84
ENSMUSG00000104690	miRNA	Gm47304	ENSMUST00000196953	miRNA		6	1	69516481	70
ENSMUSG00000096667	miRNA	Gm22862	ENSMUST00000178593	miRNA		16	-1	3353872	121
ENSMUSG00000088572	misc_RNA	Gm25454	ENSMUST00000157947	misc_RNA		6	1	111999327	315
ENSMUSG00000087890	snoRNA	Gm24868	ENSMUST00000157265	snoRNA		2	-1	151435929	136
ENSMUSG00000096830	miRNA	Gm26231	ENSMUST00000175218	miRNA		9	1	20035154	67
ENSMUSG00000089296	snRNA	Gm23205	ENSMUST00000158671	snRNA		18	1	38297939	103
ENSMUSG00000098597	miRNA	Mir6418	ENSMUST00000185075	miRNA		5	-1	137529594	115
ENSMUSG00000098269	miRNA	Mir8094	ENSMUST00000183361	miRNA		17	1	35251289	117
ENSMUSG00000058932	protein_coding	Gm2174	ENSMUST00000079663	protein_coding	principal1	X	1	56447965	402
ENSMUSG00000105738	miRNA	Mir6384	ENSMUST00000196833	miRNA		X	-1	52378181	61
ENSMUSG00000092713	snoRNA	Gm22858	ENSMUST00000174972	snoRNA		17	1	71641584	76
ENSMUSG00000092698	miRNA	Gm22926	ENSMUST00000174957	miRNA		5	1	3695964	68
ENSMUSG00000084446	rRNA	n-R5s207	ENSMUST00000122497	rRNA		2	-1	164157521	118
ENSMUSG00000065627	snRNA	Gm24803	ENSMUST00000083693	snRNA		11	-1	4324255	107
ENSMUSG00000098648	miRNA	Mir6239	ENSMUST00000183564	miRNA		14	-1	117953847	105
ENSMUSG00000099179	misc_RNA	Gm27980	ENSMUST00000184094	misc_RNA		X	1	169295009	169
ENSMUSG00000094965	scaRNA	Gm22416	ENSMUST00000158590	scaRNA		17	1	8084075	88
ENSMUSG00000088067	snRNA	Gm24480	ENSMUST00000157442	snRNA		4	-1	124697607	103
ENSMUSG00000088573	misc_RNA	Gm24530	ENSMUST00000157948	misc_RNA		13	-1	34277252	288
ENSMUSG00000094457	miRNA	Gm22626	ENSMUST00000116990	miRNA		2	1	10497352	126
ENSMUSG00000088294	snoRNA	AF357425	ENSMUST00000157669	snoRNA		12	1	109636012	73
ENSMUSG00000077172	snoRNA	Gm25762	ENSMUST00000103984	snoRNA		16	1	19411158	132
ENSMUSG00000080613	miRNA	Gm22151	ENSMUST00000116963	miRNA		8	-1	92913189	58
ENSMUSG00000095472	snoRNA	Snord88a	ENSMUST00000116723	snoRNA		7	1	44250135	90
ENSMUSG00000084705	rRNA	n-R5s63	ENSMUST00000122756	rRNA		12	-1	82585460	103
ENSMUSG00000095069	miRNA	Gm26190	ENSMUST00000116704	miRNA		9	-1	25812975	121
ENSMUSG00000105849	miRNA	Mir409	ENSMUST00000198153	miRNA		12	1	109743158	79
ENSMUSG00000088447	snoRNA	Gm22186	ENSMUST00000157822	snoRNA		10	-1	110892419	122
ENSMUSG00000088225	snoRNA	Gm22598	ENSMUST00000157600	snoRNA		16	-1	3535611	127
ENSMUSG00000077484	snoRNA	Gm25274	ENSMUST00000104296	snoRNA		13	1	8945045	135
ENSMUSG00000099212	miRNA	Mir7033	ENSMUST00000184259	miRNA		5	-1	135383810	81
ENSMUSG00000077624	snoRNA	Gm23834	ENSMUST00000104436	snoRNA		4	1	137025684	129
ENSMUSG00000088849	misc_RNA	Gm26353	ENSMUST00000158224	misc_RNA		6	1	85066183	255
ENSMUSG00000106299	miRNA	Gm44339	ENSMUST00000200598	miRNA		1	-1	173643594	84
ENSMUSG00000088144	snoRNA	Gm24559	ENSMUST00000157519	snoRNA		18	-1	74906434	121
ENSMUSG00000088020	snoRNA	Gm22762	ENSMUST00000157395	snoRNA		11	-1	90782549	137
ENSMUSG00000087838	misc_RNA	Gm23954	ENSMUST00000157213	misc_RNA		18	-1	77806666	353
ENSMUSG00000089272	snoRNA	Gm24549	ENSMUST00000158647	snoRNA		2	-1	54566136	139
ENSMUSG00000098548	miRNA	Mir6996	ENSMUST00000183922	miRNA		2	-1	26470119	61
ENSMUSG00000065329	snRNA	Gm22054	ENSMUST00000083395	snRNA		5	-1	23836321	155
ENSMUSG00000064783	snoRNA	Gm22684	ENSMUST00000082849	snoRNA		19	-1	20033635	132
ENSMUSG00000088716	snoRNA	Gm22724	ENSMUST00000158091	snoRNA		6	-1	123737012	127
ENSMUSG00000065141	snoRNA	Gm22652	ENSMUST00000083207	snoRNA		2	1	80850288	131
ENSMUSG00000087741	snRNA	Gm23827	ENSMUST00000157116	snRNA		11	-1	23777047	145
ENSMUSG00000089309	snoRNA	Gm24838	ENSMUST00000158684	snoRNA		8	-1	77146480	130
ENSMUSG00000064768	snoRNA	Snord60	ENSMUST00000082834	snoRNA		17	1	24528476	78
ENSMUSG00000096801	snRNA	Gm23412	ENSMUST00000083017	snRNA		4	-1	83285910	107
ENSMUSG00000094548	snoRNA	Gm25221	ENSMUST00000180051	snoRNA		7	-1	59430614	79
ENSMUSG00000065760	snRNA	Gm23848	ENSMUST00000083826	snRNA		15	1	49538195	106
ENSMUSG00000080657	miRNA	Mir669i	ENSMUST00000117007	miRNA		2	1	10517604	127
ENSMUSG00000096597	protein_coding	Gm21886	ENSMUST00000178391	protein_coding	principal1	18	-1	80089962	645
ENSMUSG00000105697	miRNA	Mir7661	ENSMUST00000197023	miRNA		6	1	108489743	61
ENSMUSG00000078006	miRNA	Gm26301	ENSMUST00000104813	miRNA		8	-1	102732484	95
ENSMUSG00000088147	snoRNA	Gm24717	ENSMUST00000157522	snoRNA		10	1	129695978	124
ENSMUSG00000065429	miRNA	Mir345	ENSMUST00000083495	miRNA		12	1	108836973	96
ENSMUSG00000088625	snRNA	Gm23318	ENSMUST00000158000	snRNA		4	1	148555697	108
ENSMUSG00000084537	misc_RNA	Gm25845	ENSMUST00000122588	misc_RNA		18	-1	25598454	310
ENSMUSG00000065503	miRNA	Mir351	ENSMUST00000083569	miRNA		X	-1	53053353	99
ENSMUSG00000077743	rRNA	n-R5s16	ENSMUST00000104555	rRNA		X	1	155543290	119
ENSMUSG00000088966	snoRNA	Gm22088	ENSMUST00000158341	snoRNA		12	1	51085687	117
ENSMUSG00000065510	miRNA	Mir361	ENSMUST00000083576	miRNA		X	-1	113074893	70
ENSMUSG00000089220	snoRNA	Gm22074	ENSMUST00000158595	snoRNA		3	1	6977268	113
ENSMUSG00000094677	miRNA	Gm22008	ENSMUST00000104810	miRNA		9	1	117999336	95
ENSMUSG00000093323	miRNA	Gm24970	ENSMUST00000175582	miRNA		17	-1	31565043	82
ENSMUSG00000065715	snoRNA	Snord7	ENSMUST00000083781	snoRNA		11	1	83294304	97
ENSMUSG00000065378	snoRNA	Gm22744	ENSMUST00000083444	snoRNA		19	1	8725092	65
ENSMUSG00000077538	snoRNA	Gm22545	ENSMUST00000104350	snoRNA		8	1	129017890	132
ENSMUSG00000080580	miRNA	Mir466f-4	ENSMUST00000116930	miRNA		13	1	71107089	121
ENSMUSG00000104854	miRNA	Mir7116	ENSMUST00000195956	miRNA		11	-1	100478480	70
ENSMUSG00000084644	misc_RNA	Gm24379	ENSMUST00000122695	misc_RNA		2	1	158487602	86
ENSMUSG00000065118	snoRNA	Gm23297	ENSMUST00000083184	snoRNA		7	-1	143531520	127
ENSMUSG00000077315	snoRNA	Gm24172	ENSMUST00000104127	snoRNA		10	1	69132882	117
ENSMUSG00000098822	miRNA	Mir7039	ENSMUST00000183852	miRNA		5	-1	144896816	85
ENSMUSG00000098956	misc_RNA	Gm27855	ENSMUST00000184122	misc_RNA		9	-1	110109139	128
ENSMUSG00000099295	misc_RNA	Gm27718	ENSMUST00000183721	misc_RNA		15	1	62107187	86
ENSMUSG00000065675	snRNA	Gm24260	ENSMUST00000083741	snRNA		3	-1	139417863	107
ENSMUSG00000089080	snRNA	Gm24003	ENSMUST00000158455	snRNA		5	1	32913631	100
ENSMUSG00000087921	misc_RNA	Gm23228	ENSMUST00000157296	misc_RNA		15	1	3798912	270
ENSMUSG00000104958	miRNA	Mir7238	ENSMUST00000198377	miRNA		8	-1	11635736	43
ENSMUSG00000065637	snoRNA	Gm26397	ENSMUST00000083703	snoRNA		8	-1	126944980	134
ENSMUSG00000096475	snoRNA	Snord116l1	ENSMUST00000179518	snoRNA		7	-1	59894713	94
ENSMUSG00000092731	miRNA	Gm24026	ENSMUST00000174990	miRNA		17	1	30967197	98
ENSMUSG00000088932	snRNA	Gm25920	ENSMUST00000158307	snRNA		3	-1	137913088	99
ENSMUSG00000084750	misc_RNA	Gm22453	ENSMUST00000122801	misc_RNA		17	-1	36242106	318
ENSMUSG00000076062	miRNA	Mir92-1	ENSMUST00000102108	miRNA		14	1	115044427	80
ENSMUSG00000076282	miRNA	Gm24271	ENSMUST00000102327	miRNA		10	-1	44922177	111
ENSMUSG00000077633	snRNA	Gm22148	ENSMUST00000104445	snRNA		8	1	104507902	107
ENSMUSG00000096136	snoRNA	Gm25146	ENSMUST00000177976	snoRNA		7	-1	59595243	79
ENSMUSG00000088615	snRNA	Gm22485	ENSMUST00000157990	snRNA		14	1	27489269	109
ENSMUSG00000098857	misc_RNA	Gm27395	ENSMUST00000183938	misc_RNA		7	1	143251367	460
ENSMUSG00000064414	rRNA	n-R5s215	ENSMUST00000082480	rRNA		1	1	85674882	104
ENSMUSG00000088781	snoRNA	Gm25373	ENSMUST00000158156	snoRNA		6	1	145464189	115
ENSMUSG00000084448	snRNA	Gm26256	ENSMUST00000122499	snRNA		12	1	67612296	186
ENSMUSG00000088993	snRNA	Gm22770	ENSMUST00000158368	snRNA		16	-1	17483149	67
ENSMUSG00000065309	snRNA	Gm23244	ENSMUST00000083375	snRNA		6	-1	113035934	92
ENSMUSG00000087786	snRNA	Gm23173	ENSMUST00000157161	snRNA		5	-1	100517443	160
ENSMUSG00000084606	snRNA	Gm23118	ENSMUST00000122657	snRNA		2	-1	5260115	187
ENSMUSG00000095053	snRNA	Gm25671	ENSMUST00000178612	snRNA		7	1	38928775	105
ENSMUSG00000089509	snoRNA	Gm23474	ENSMUST00000158884	snoRNA		12	1	109633768	75
ENSMUSG00000104817	miRNA	Gm44358	ENSMUST00000196301	miRNA		7	-1	78026640	98
ENSMUSG00000094704	snRNA	Gm24487	ENSMUST00000178017	snRNA		15	1	30601514	63
ENSMUSG00000084651	miRNA	Mir1904	ENSMUST00000122702	miRNA		13	1	109903809	80
ENSMUSG00000084600	miRNA	Gm22201	ENSMUST00000122651	miRNA		17	1	32389011	59
ENSMUSG00000089406	miRNA	Mir2136	ENSMUST00000158781	miRNA		9	1	104426113	75
ENSMUSG00000095639	snoRNA	Gm22941	ENSMUST00000179630	snoRNA		7	-1	59786911	94
ENSMUSG00000077155	snRNA	Gm24582	ENSMUST00000103967	snRNA		11	1	57741300	103
ENSMUSG00000077706	rRNA	n-R5s72	ENSMUST00000104518	rRNA		11	-1	90185127	119
ENSMUSG00000087723	snoRNA	Gm26278	ENSMUST00000157098	snoRNA		10	1	101544177	132
ENSMUSG00000098532	miRNA	Mir7065	ENSMUST00000185110	miRNA		8	1	13136072	61
ENSMUSG00000076448	miRNA	Mir763	ENSMUST00000103249	miRNA		10	-1	120448110	120
ENSMUSG00000076948	miRNA	Mir467e	ENSMUST00000103760	miRNA		2	1	10505721	87
ENSMUSG00000080342	miRNA	Gm24589	ENSMUST00000116692	miRNA		17	1	24594978	94
ENSMUSG00000092912	snRNA	Gm24086	ENSMUST00000175171	snRNA		1	1	136697374	98
ENSMUSG00000093615	miRNA	Mir5618	ENSMUST00000175907	miRNA		9	1	7784390	51
ENSMUSG00000094292	snRNA	Gm23610	ENSMUST00000178659	snRNA		18	1	46900801	107
ENSMUSG00000089054	snRNA	Gm23350	ENSMUST00000158429	snRNA		18	-1	9763262	103
ENSMUSG00000076355	miRNA	Gm27509	ENSMUST00000102400	miRNA		9	-1	42862129	79
ENSMUSG00000064422	snRNA	Gm22502	ENSMUST00000082488	snRNA		2	1	180698063	107
ENSMUSG00000094997	snoRNA	Gm22047	ENSMUST00000179176	snoRNA		7	-1	59791937	94
ENSMUSG00000080413	snRNA	Gm26473	ENSMUST00000116763	snRNA		7	-1	16234864	127
ENSMUSG00000077681	snoRNA	Gm22496	ENSMUST00000104493	snoRNA		7	-1	59347424	88
ENSMUSG00000065242	snRNA	Gm22294	ENSMUST00000083308	snRNA		X	1	17325315	104
ENSMUSG00000064967	snRNA	Gm24405	ENSMUST00000083033	snRNA		1	1	178636905	167
ENSMUSG00000077494	snoRNA	Gm23595	ENSMUST00000104306	snoRNA		9	1	107164977	130
ENSMUSG00000098698	miRNA	Mir6960	ENSMUST00000183449	miRNA		15	1	99080805	61
ENSMUSG00000087993	miRNA	Mir1982	ENSMUST00000157368	miRNA		10	1	80828797	74
ENSMUSG00000096502	snoRNA	Gm23089	ENSMUST00000178947	snoRNA		7	-1	59718681	94
ENSMUSG00000098320	misc_RNA	Vis1	ENSMUST00000183957	misc_RNA		2	1	45280724	201
ENSMUSG00000077401	rRNA	n-R5s82	ENSMUST00000104213	rRNA		9	1	37026399	109
ENSMUSG00000098328	misc_RNA	Gm27271	ENSMUST00000183509	misc_RNA		13	1	56704030	170
ENSMUSG00000064800	snoRNA	Gm24948	ENSMUST00000082866	snoRNA		12	1	45984343	207
ENSMUSG00000088856	snoRNA	Gm24727	ENSMUST00000158231	snoRNA		8	1	33691801	144
ENSMUSG00000098538	misc_RNA	Gm27866	ENSMUST00000184459	misc_RNA		6	1	52266584	171
ENSMUSG00000094639	snRNA	Gm24218	ENSMUST00000180163	snRNA		16	1	36386190	105
ENSMUSG00000075726	snoRNA	Gm23254	ENSMUST00000097244	snoRNA		7	-1	59483152	79
ENSMUSG00000088731	snoRNA	Gm23893	ENSMUST00000158106	snoRNA		9	1	24964536	134
ENSMUSG00000065548	miRNA	Mir29c	ENSMUST00000083614	miRNA		1	1	195037547	88
ENSMUSG00000065500	miRNA	Mir10b	ENSMUST00000083566	miRNA		2	1	74726070	68
ENSMUSG00000098819	miRNA	Gm27784	ENSMUST00000184926	miRNA		16	-1	60699291	113
ENSMUSG00000099071	miRNA	Mir8095	ENSMUST00000185103	miRNA		16	-1	22532184	129
ENSMUSG00000093359	miRNA	Gm23292	ENSMUST00000175618	miRNA		7	1	36302515	101
ENSMUSG00000080676	miRNA	Gm25347	ENSMUST00000117026	miRNA		3	-1	115484136	121
ENSMUSG00000096559	snRNA	Gm23567	ENSMUST00000178005	snRNA		9	1	72969602	107
ENSMUSG00000087808	snRNA	Gm23435	ENSMUST00000157183	snRNA		6	1	35243595	156
ENSMUSG00000087843	snRNA	Gm23314	ENSMUST00000157218	snRNA		4	1	36756048	107
ENSMUSG00000088776	snRNA	Gm26038	ENSMUST00000158151	snRNA		18	-1	57669558	106
ENSMUSG00000089069	snoRNA	Gm22840	ENSMUST00000158444	snoRNA		6	1	93890615	136
ENSMUSG00000095447	miRNA	Gm23403	ENSMUST00000179169	miRNA		6	1	133191792	110
ENSMUSG00000084639	misc_RNA	Gm23888	ENSMUST00000122690	misc_RNA		8	-1	4115765	253
ENSMUSG00000077672	snoRNA	Gm24472	ENSMUST00000104484	snoRNA		3	1	87066893	132
ENSMUSG00000093325	snRNA	Gm26061	ENSMUST00000175584	snRNA		11	1	51964382	108
ENSMUSG00000088386	snRNA	Gm24692	ENSMUST00000157761	snRNA		12	-1	54240900	146
ENSMUSG00000088148	miRNA	Mir1983	ENSMUST00000157523	miRNA		13	-1	21897049	132
ENSMUSG00000088542	snRNA	Gm24962	ENSMUST00000157917	snRNA		7	-1	141106037	109
ENSMUSG00000098826	miRNA	Mir7677	ENSMUST00000184226	miRNA		17	1	27091245	67
ENSMUSG00000088678	snoRNA	Gm23666	ENSMUST00000158053	snoRNA		8	1	53006408	116
ENSMUSG00000089370	snRNA	Gm22140	ENSMUST00000158745	snRNA		8	1	32186129	120
ENSMUSG00000099243	misc_RNA	Gm27538	ENSMUST00000185065	misc_RNA		2	-1	105122481	294
ENSMUSG00000092819	snoRNA	Gm23639	ENSMUST00000175078	snoRNA		18	1	33795164	132
ENSMUSG00000077697	snoRNA	Gm25346	ENSMUST00000104509	snoRNA		9	-1	25569805	128
ENSMUSG00000084583	snRNA	Gm25177	ENSMUST00000122634	snRNA		17	-1	50917041	117
ENSMUSG00000088824	snoRNA	Gm25222	ENSMUST00000158199	snoRNA		3	-1	64894596	126
ENSMUSG00000084701	rRNA	n-R5s87	ENSMUST00000122752	rRNA		9	-1	96549709	116
ENSMUSG00000088428	rRNA	Gm22556	ENSMUST00000157803	rRNA		8	-1	115052913	100
ENSMUSG00000077228	snoRNA	Gm22273	ENSMUST00000104040	snoRNA		5	-1	62132484	132
ENSMUSG00000098955	miRNA	Mir6935	ENSMUST00000183615	miRNA		11	-1	120347413	64
ENSMUSG00000080451	miRNA	Gm24193	ENSMUST00000116801	miRNA		13	-1	61823664	121
ENSMUSG00000077407	snoRNA	Gm25422	ENSMUST00000104219	snoRNA		10	-1	105140335	129
ENSMUSG00000077881	miRNA	Mir882	ENSMUST00000104689	miRNA		12	1	109682197	77
ENSMUSG00000088937	rRNA	Gm25923	ENSMUST00000158312	rRNA		12	-1	28060528	138
ENSMUSG00000089144	snoRNA	Gm25264	ENSMUST00000158519	snoRNA		2	-1	46607083	117
ENSMUSG00000094888	snoRNA	Gm25120	ENSMUST00000180148	snoRNA		7	-1	59436227	79
ENSMUSG00000065767	snRNA	Gm23849	ENSMUST00000083833	snRNA		11	1	101627366	191
ENSMUSG00000076216	miRNA	Mir695	ENSMUST00000102261	miRNA		2	1	155356817	109
ENSMUSG00000076281	miRNA	Gm24270	ENSMUST00000102326	miRNA		9	-1	56223771	57
ENSMUSG00000092825	miRNA	Gm23164	ENSMUST00000175084	miRNA		2	1	76479219	111
ENSMUSG00000076274	miRNA	Gm25083	ENSMUST00000102319	miRNA		17	-1	25746879	92
ENSMUSG00000093874	snoRNA	Gm24539	ENSMUST00000101994	snoRNA		13	1	62136930	133
ENSMUSG00000098798	miRNA	Gm27288	ENSMUST00000184215	miRNA		8	1	19493189	80
ENSMUSG00000089134	miRNA	Gm24767	ENSMUST00000158509	miRNA		6	1	115099554	95
ENSMUSG00000087897	misc_RNA	Gm25283	ENSMUST00000157272	misc_RNA		6	1	47637143	77
ENSMUSG00000084711	misc_RNA	Gm24629	ENSMUST00000122762	misc_RNA		8	1	105203993	89
ENSMUSG00000095176	snoRNA	Gm22723	ENSMUST00000083820	snoRNA		6	-1	60071186	129
ENSMUSG00000095782	miRNA	Mir465c-1	ENSMUST00000093560	miRNA		X	-1	66826035	81
ENSMUSG00000077618	snoRNA	Gm25496	ENSMUST00000104430	snoRNA		13	-1	11426898	120
ENSMUSG00000087943	miRNA	Gm24245	ENSMUST00000157318	miRNA		4	1	139338304	57
ENSMUSG00000095165	snRNA	Gm25547	ENSMUST00000178877	snRNA		16	-1	14807269	107
ENSMUSG00000087781	snoRNA	Gm23168	ENSMUST00000157156	snoRNA		7	1	124492906	143
ENSMUSG00000096350	miRNA	Gm25707	ENSMUST00000175120	miRNA		4	1	132408309	96
ENSMUSG00000089307	snoRNA	Gm24843	ENSMUST00000158682	snoRNA		6	-1	124058614	76
ENSMUSG00000088717	snoRNA	Gm22725	ENSMUST00000158092	snoRNA		14	-1	70422280	110
ENSMUSG00000077419	snRNA	Gm23744	ENSMUST00000104231	snRNA		1	1	155954574	149
ENSMUSG00000098652	miRNA	Gm27671	ENSMUST00000183739	miRNA		16	-1	14128631	66
ENSMUSG00000077495	snoRNA	Gm23594	ENSMUST00000104307	snoRNA		9	1	99943709	134
ENSMUSG00000094419	snRNA	Gm24797	ENSMUST00000178103	snRNA		7	1	38792638	107
ENSMUSG00000084493	snRNA	Gm22106	ENSMUST00000122544	snRNA		15	1	73729164	127
ENSMUSG00000094389	snoRNA	Snord116l14	ENSMUST00000179875	snoRNA		7	-1	59871957	94
ENSMUSG00000098916	miRNA	Gm27749	ENSMUST00000183651	miRNA		19	1	50144491	125
ENSMUSG00000077664	snoRNA	Gm26145	ENSMUST00000104476	snoRNA		1	-1	31259719	127
ENSMUSG00000094573	snoRNA	Snord116l13	ENSMUST00000177737	snoRNA		7	-1	59874473	94
ENSMUSG00000098303	miRNA	Gm27459	ENSMUST00000184860	miRNA		7	1	74235558	107
ENSMUSG00000098416	miRNA	Mir7117	ENSMUST00000184426	miRNA		15	1	27571494	65
ENSMUSG00000064602	snoRNA	Snora41	ENSMUST00000082668	snoRNA		1	1	63179004	132
ENSMUSG00000093290	miRNA	Mir3572	ENSMUST00000175549	miRNA		7	1	3655962	86
ENSMUSG00000088266	snoRNA	Gm24782	ENSMUST00000157641	snoRNA		19	-1	27704007	132
ENSMUSG00000080665	miRNA	Mir1199	ENSMUST00000117015	miRNA		8	-1	84011633	119
ENSMUSG00000065425	miRNA	Mir325	ENSMUST00000083491	miRNA		X	-1	105379179	98
ENSMUSG00000092660	miRNA	Gm22403	ENSMUST00000174919	miRNA		2	-1	61762469	84
ENSMUSG00000098978	misc_RNA	Gm27545	ENSMUST00000184755	misc_RNA		8	1	7525256	202
ENSMUSG00000093114	miRNA	Gm22696	ENSMUST00000175373	miRNA		12	-1	77116432	68
ENSMUSG00000076180	miRNA	Gm24938	ENSMUST00000102225	miRNA		7	-1	42605265	110
ENSMUSG00000094901	miRNA	Gm23576	ENSMUST00000179918	miRNA		18	1	60174317	110
ENSMUSG00000106151	miRNA	Gm44351	ENSMUST00000200090	miRNA		X	-1	142962697	95
ENSMUSG00000098260	misc_RNA	Gm27522	ENSMUST00000183949	misc_RNA		6	1	30734418	230
ENSMUSG00000077519	snoRNA	Gm25880	ENSMUST00000104331	snoRNA		4	1	153876384	132
ENSMUSG00000106195	miRNA	Gm44340	ENSMUST00000197487	miRNA		14	-1	70300007	86
ENSMUSG00000087968	scaRNA	Gm25395	ENSMUST00000157343	scaRNA		1	1	87776938	272
ENSMUSG00000095010	miRNA	Gm23490	ENSMUST00000179974	miRNA		7	-1	61706670	80
ENSMUSG00000065661	snRNA	Gm22580	ENSMUST00000083727	snRNA		X	1	83536031	107
ENSMUSG00000088812	snRNA	Gm22384	ENSMUST00000158187	snRNA		9	-1	106812598	104
ENSMUSG00000077215	snoRNA	Gm23949	ENSMUST00000104027	snoRNA		9	-1	99750517	127
ENSMUSG00000088726	snoRNA	Gm22210	ENSMUST00000158101	snoRNA		18	1	63533068	144
ENSMUSG00000089479	snRNA	Gm25362	ENSMUST00000158854	snRNA		11	1	105081628	105
ENSMUSG00000087982	rRNA	Gm22224	ENSMUST00000157357	rRNA		16	-1	8873171	93
ENSMUSG00000089431	snRNA	Gm23196	ENSMUST00000158806	snRNA		3	1	132939870	107
ENSMUSG00000084505	snRNA	Gm25322	ENSMUST00000122556	snRNA		1	1	119530211	104
ENSMUSG00000077385	snoRNA	Gm22657	ENSMUST00000104197	snoRNA		9	-1	65952445	132
ENSMUSG00000088659	rRNA	Gm24845	ENSMUST00000158034	rRNA		18	1	69551963	109
ENSMUSG00000087937	snRNA	Gm26046	ENSMUST00000157312	snRNA		19	1	29986099	166
ENSMUSG00000065448	miRNA	Mir154	ENSMUST00000083514	miRNA		12	1	109738433	66
ENSMUSG00000096126	snRNA	Gm22307	ENSMUST00000180019	snRNA		1	1	4529017	107
ENSMUSG00000064427	snoRNA	Gm22748	ENSMUST00000082493	snoRNA		12	1	17546146	136
ENSMUSG00000106366	miRNA	Mir3069	ENSMUST00000198802	miRNA		12	-1	105031141	65
ENSMUSG00000099000	snRNA	Gm27659	ENSMUST00000183472	snRNA		X	-1	145667070	98
ENSMUSG00000070225	rRNA	n-R5s33	ENSMUST00000093713	rRNA		16	1	33001903	119
ENSMUSG00000065732	snRNA	Gm24492	ENSMUST00000083798	snRNA		17	-1	84287747	107
ENSMUSG00000098879	miRNA	Mir7675	ENSMUST00000184262	miRNA		12	1	11299887	58
ENSMUSG00000094039	snoRNA	Snord116l5	ENSMUST00000179927	snoRNA		7	-1	59887150	94
ENSMUSG00000098717	misc_RNA	Gm28032	ENSMUST00000184104	misc_RNA		6	1	52246009	96
ENSMUSG00000077829	miRNA	Gm23237	ENSMUST00000104639	miRNA		3	1	3555465	92
ENSMUSG00000098732	misc_RNA	Gm27834	ENSMUST00000183427	misc_RNA		13	1	56703881	125
ENSMUSG00000094148	snoRNA	Gm24952	ENSMUST00000177909	snoRNA		7	-1	59580269	79
ENSMUSG00000084540	rRNA	n-R5s84	ENSMUST00000122591	rRNA		9	1	62515029	109
ENSMUSG00000088196	snoRNA	Gm23902	ENSMUST00000157571	snoRNA		1	1	128490040	134
ENSMUSG00000098736	misc_RNA	Gm27838	ENSMUST00000184829	misc_RNA		X	1	68678485	128
ENSMUSG00000064408	snRNA	Gm23924	ENSMUST00000082474	snRNA		6	-1	74451904	108
ENSMUSG00000093571	misc_RNA	Gm24757	ENSMUST00000176987	misc_RNA		7	1	30311525	371
ENSMUSG00000084622	misc_RNA	Gm25545	ENSMUST00000122673	misc_RNA		10	1	75442620	323
ENSMUSG00000065011	snRNA	Gm23506	ENSMUST00000083077	snRNA		11	1	85163077	107
ENSMUSG00000094020	snRNA	Gm23003	ENSMUST00000179948	snRNA		16	-1	55594888	107
ENSMUSG00000088219	snoRNA	Gm22077	ENSMUST00000157594	snoRNA		15	-1	80080343	93
ENSMUSG00000088265	snRNA	Gm24784	ENSMUST00000157640	snRNA		6	1	103588704	62
ENSMUSG00000077399	snoRNA	Gm24335	ENSMUST00000104211	snoRNA		8	-1	23290164	132
ENSMUSG00000088184	snRNA	Gm23137	ENSMUST00000157559	snRNA		11	-1	87444580	107
ENSMUSG00000065415	miRNA	Mir217	ENSMUST00000083481	miRNA		11	1	28763728	108
ENSMUSG00000092921	miRNA	Mir344b	ENSMUST00000175180	miRNA		7	-1	61790581	63
ENSMUSG00000093599	miRNA	Mir5620	ENSMUST00000176903	miRNA		7	1	7298891	56
ENSMUSG00000088791	snRNA	Gm22542	ENSMUST00000158166	snRNA		17	-1	88342482	95
ENSMUSG00000088201	snRNA	Gm23754	ENSMUST00000157576	snRNA		15	1	36205260	63
ENSMUSG00000076424	miRNA	Gm25986	ENSMUST00000102469	miRNA		16	1	62808349	68
ENSMUSG00000087790	snoRNA	Gm25970	ENSMUST00000157165	snoRNA		12	1	65056573	86
ENSMUSG00000065031	snRNA	Gm22364	ENSMUST00000083097	snRNA		X	-1	36409707	98
ENSMUSG00000065328	snoRNA	Gm22053	ENSMUST00000083394	snoRNA		14	1	10478674	200
ENSMUSG00000094982	snRNA	Gm23725	ENSMUST00000177876	snRNA		3	-1	157237331	107
ENSMUSG00000093234	miRNA	Mir3085	ENSMUST00000175493	miRNA		19	-1	42280170	89
ENSMUSG00000096893	miRNA	Mir344d-2	ENSMUST00000179092	miRNA		7	-1	61685351	80
ENSMUSG00000093782	miRNA	Gm22396	ENSMUST00000177110	miRNA		1	1	82839446	53
ENSMUSG00000087892	snoRNA	Gm25278	ENSMUST00000157267	snoRNA		8	1	16852168	120
ENSMUSG00000087768	snRNA	Gm22755	ENSMUST00000157143	snRNA		5	1	20264341	100
ENSMUSG00000098373	misc_RNA	Gm27679	ENSMUST00000184612	misc_RNA		9	-1	3263525	84
ENSMUSG00000096479	snRNA	Gm24464	ENSMUST00000179697	snRNA		7	-1	18745209	107
ENSMUSG00000084452	misc_RNA	Gm24597	ENSMUST00000122503	misc_RNA		13	-1	91745004	300
ENSMUSG00000098367	misc_RNA	Gm27645	ENSMUST00000183348	misc_RNA		2	1	45113908	77
ENSMUSG00000064497	snRNA	Gm22062	ENSMUST00000082563	snRNA		X	-1	165717515	107
ENSMUSG00000064759	snRNA	Gm25475	ENSMUST00000082825	snRNA		11	-1	101397768	180
ENSMUSG00000096021	snRNA	Gm25985	ENSMUST00000122677	snRNA		13	1	115116127	107
ENSMUSG00000077359	snRNA	Gm25308	ENSMUST00000104171	snRNA		2	-1	118077962	158
ENSMUSG00000106578	miRNA	Mir7217	ENSMUST00000200304	miRNA		17	1	27355738	62
ENSMUSG00000088490	snRNA	Gm24400	ENSMUST00000157865	snRNA		19	-1	43857351	107
ENSMUSG00000088286	snRNA	Gm23590	ENSMUST00000157661	snRNA		15	1	102373880	104
ENSMUSG00000098709	misc_RNA	Gm27528	ENSMUST00000183544	misc_RNA		12	1	109532442	205
ENSMUSG00000084467	rRNA	n-R5s24	ENSMUST00000122518	rRNA		18	1	34509737	117
ENSMUSG00000094283	snoRNA	Gm26434	ENSMUST00000179778	snoRNA		7	-1	59615822	79
ENSMUSG00000092898	rRNA	Gm23806	ENSMUST00000175157	rRNA		X	1	159449277	109
ENSMUSG00000092813	miRNA	Mir3086	ENSMUST00000175072	miRNA		19	-1	58911759	87
ENSMUSG00000064490	snRNA	Gm22283	ENSMUST00000082556	snRNA		6	-1	76200278	161
ENSMUSG00000065353	snoRNA	Snora73b	ENSMUST00000083419	snoRNA		4	-1	132352526	205
ENSMUSG00000065434	miRNA	Mir7-1	ENSMUST00000083500	miRNA		13	-1	58392886	108
ENSMUSG00000095149	snRNA	Gm24390	ENSMUST00000179578	snRNA		15	-1	72491019	62
ENSMUSG00000096848	snRNA	Gm23379	ENSMUST00000180026	snRNA		3	-1	157398368	107
ENSMUSG00000096444	snRNA	Gm26139	ENSMUST00000180098	snRNA		14	1	98624190	107
ENSMUSG00000098712	miRNA	Mir7010	ENSMUST00000183464	miRNA		3	-1	82106309	63
ENSMUSG00000065939	snoRNA	Snora2b	ENSMUST00000084005	snoRNA		15	-1	98526482	137
ENSMUSG00000089423	snRNA	Gm26007	ENSMUST00000158798	snRNA		X	-1	163388891	120
ENSMUSG00000096291	snoRNA	Gm23933	ENSMUST00000178405	snoRNA		7	-1	59389898	79
ENSMUSG00000089575	snoRNA	Gm23005	ENSMUST00000158950	snoRNA		2	-1	151283110	136
ENSMUSG00000077619	snoRNA	Gm25495	ENSMUST00000104431	snoRNA		14	1	90356387	131
ENSMUSG00000077517	snoRNA	Gm25876	ENSMUST00000104329	snoRNA		3	1	85950888	119
ENSMUSG00000076120	miRNA	Mir551b	ENSMUST00000102165	miRNA		3	1	29416823	98
ENSMUSG00000077857	snRNA	Gm25061	ENSMUST00000104665	snRNA		X	-1	127906559	107
ENSMUSG00000080452	miRNA	Mir1306	ENSMUST00000116802	miRNA		16	-1	18284317	79
ENSMUSG00000077507	snoRNA	Gm24235	ENSMUST00000104319	snoRNA		5	1	54827215	129
ENSMUSG00000077663	snoRNA	Gm26144	ENSMUST00000104475	snoRNA		4	-1	56679035	132
ENSMUSG00000093006	miRNA	Gm24157	ENSMUST00000175265	miRNA		11	-1	52099153	111
ENSMUSG00000098642	rRNA	Gm27977	ENSMUST00000185159	rRNA		10	1	44668384	111
ENSMUSG00000065486	miRNA	Mir450-1	ENSMUST00000083552	miRNA		X	-1	53048244	91
ENSMUSG00000088282	snoRNA	Gm23586	ENSMUST00000157657	snoRNA		X	1	126900896	123
ENSMUSG00000079438	protein_coding	Gm11115	ENSMUST00000113255	protein_coding	principal1	5	-1	88154099	54
ENSMUSG00000087842	snRNA	Gm25622	ENSMUST00000157217	snRNA		12	1	113214149	104
ENSMUSG00000064918	snoRNA	Gm22571	ENSMUST00000082984	snoRNA		9	1	64175873	70
ENSMUSG00000092934	miRNA	Gm22903	ENSMUST00000175193	miRNA		3	-1	122232636	102
ENSMUSG00000089261	miRNA	Mir669n	ENSMUST00000158636	miRNA		3	1	115979902	54
ENSMUSG00000088051	snRNA	Gm26150	ENSMUST00000157426	snRNA		8	-1	36406244	151
ENSMUSG00000098925	snoRNA	Rnu3b2	ENSMUST00000185073	snoRNA		11	1	87471368	215
ENSMUSG00000084536	misc_RNA	Gm25844	ENSMUST00000122587	misc_RNA		4	-1	111988958	309
ENSMUSG00000098737	miRNA	Mir7014	ENSMUST00000183853	miRNA		3	-1	95734973	63
ENSMUSG00000076396	miRNA	Mir667	ENSMUST00000102441	miRNA		12	1	109720006	92
ENSMUSG00000098599	misc_RNA	Gm27627	ENSMUST00000183644	misc_RNA		5	-1	112217467	150
ENSMUSG00000064945	misc_RNA	Rny3	ENSMUST00000083011	misc_RNA		6	1	47781624	102
ENSMUSG00000080515	miRNA	Gm22196	ENSMUST00000116865	miRNA		5	1	7888685	109
ENSMUSG00000064604	snoRNA	Snora44	ENSMUST00000082670	snoRNA		4	1	132309941	129
ENSMUSG00000096117	snRNA	Gm26271	ENSMUST00000158349	snRNA		1	1	139671604	104
ENSMUSG00000099123	miRNA	Mir6965	ENSMUST00000184733	miRNA		17	-1	24240947	64
ENSMUSG00000098931	miRNA	Mir8099-2	ENSMUST00000183568	miRNA		12	1	93927338	127
ENSMUSG00000065036	snoRNA	Gm22362	ENSMUST00000083102	snoRNA		6	-1	131380406	134
ENSMUSG00000098674	misc_RNA	Gm27813	ENSMUST00000184343	misc_RNA		6	1	108456183	354
ENSMUSG00000088589	snRNA	Gm22961	ENSMUST00000157964	snRNA		4	-1	138587729	106
ENSMUSG00000064547	misc_RNA	Gm22982	ENSMUST00000082613	misc_RNA		4	1	121134657	319
ENSMUSG00000080346	miRNA	Gm24588	ENSMUST00000116696	miRNA		13	1	62779594	83
ENSMUSG00000087820	miRNA	Mir1928	ENSMUST00000157195	miRNA		1	-1	74206620	67
ENSMUSG00000098286	miRNA	Mir8091	ENSMUST00000183602	miRNA		19	1	41588651	139
ENSMUSG00000093508	miRNA	Mir5709	ENSMUST00000176783	miRNA		17	-1	67026235	89
ENSMUSG00000077669	snoRNA	Gm24255	ENSMUST00000104481	snoRNA		11	-1	25238715	128
ENSMUSG00000095537	snRNA	Gm25286	ENSMUST00000179790	snRNA		7	1	38613149	105
ENSMUSG00000084694	misc_RNA	Gm24893	ENSMUST00000122745	misc_RNA		2	-1	130705696	369
ENSMUSG00000099307	misc_RNA	Gm27419	ENSMUST00000184576	misc_RNA		10	-1	92135808	109
ENSMUSG00000105256	miRNA	Gm19658	ENSMUST00000196231	miRNA		13	-1	21810849	138
ENSMUSG00000089114	snoRNA	Gm25906	ENSMUST00000158489	snoRNA		8	-1	70123153	126
ENSMUSG00000106163	snoRNA	Gm26047	ENSMUST00000198840	snoRNA		4	-1	106119082	115
ENSMUSG00000094227	protein_coding	Gm21767	ENSMUST00000178689	protein_coding	principal1	Y	1	13941738	543
ENSMUSG00000095394	snoRNA	Gm25485	ENSMUST00000104120	snoRNA		4	1	50286746	132
ENSMUSG00000077253	snRNA	Gm26076	ENSMUST00000104065	snRNA		3	-1	110564541	105
ENSMUSG00000070167	snoRNA	Snora57	ENSMUST00000093658	snoRNA		19	-1	8888685	148
ENSMUSG00000065330	snRNA	Gm25755	ENSMUST00000083396	snRNA		3	-1	65771617	107
ENSMUSG00000064606	snRNA	Gm25899	ENSMUST00000082672	snRNA		4	-1	83527768	141
ENSMUSG00000087831	snoRNA	Gm23960	ENSMUST00000157206	snoRNA		6	-1	21013242	131
ENSMUSG00000064663	snRNA	Gm24859	ENSMUST00000082729	snRNA		12	1	52603788	107
ENSMUSG00000065916	snRNA	Gm24446	ENSMUST00000083982	snRNA		11	-1	41035123	156
ENSMUSG00000098777	miRNA	Gm27437	ENSMUST00000183429	miRNA		7	1	39431507	107
ENSMUSG00000084748	snRNA	Gm25289	ENSMUST00000122799	snRNA		18	1	12163438	119
ENSMUSG00000095118	snoRNA	Snord14d	ENSMUST00000083424	snoRNA		9	1	40803995	86
ENSMUSG00000089274	snRNA	Gm24547	ENSMUST00000158649	snRNA		1	1	122510549	149
ENSMUSG00000077096	miRNA	Gm22015	ENSMUST00000103908	miRNA		12	-1	91791674	65
ENSMUSG00000093791	miRNA	Gm24092	ENSMUST00000180257	miRNA		1	1	189393350	121
ENSMUSG00000093087	miRNA	Mir3473d	ENSMUST00000175346	miRNA		8	-1	111016530	81
ENSMUSG00000098830	miRNA	Mir7024	ENSMUST00000183676	miRNA		5	-1	33898971	62
ENSMUSG00000095458	snoRNA	Snord116l8	ENSMUST00000179889	snoRNA		7	-1	59879552	94
ENSMUSG00000064617	rRNA	n-R5s176	ENSMUST00000082683	rRNA		5	1	120064335	109
ENSMUSG00000098961	miRNA	Mir6949	ENSMUST00000184701	miRNA		14	-1	56082468	68
ENSMUSG00000095727	miRNA	Gm23646	ENSMUST00000178119	miRNA		8	1	107840957	101
ENSMUSG00000087841	snRNA	Gm25623	ENSMUST00000157216	snRNA		4	1	34086126	108
ENSMUSG00000088393	miRNA	Gm26308	ENSMUST00000157768	miRNA		10	-1	128377899	69
ENSMUSG00000075983	snRNA	Gm24121	ENSMUST00000102029	snRNA		5	-1	86929008	106
ENSMUSG00000065599	miRNA	Mir23b	ENSMUST00000083665	miRNA		13	1	63300484	74
ENSMUSG00000091195	protein_coding	Gm17332	ENSMUST00000165626	protein_coding	principal1	11	-1	31182462	87
ENSMUSG00000065819	snRNA	Gm24693	ENSMUST00000083885	snRNA		8	1	99072463	107
ENSMUSG00000087714	snRNA	Gm25827	ENSMUST00000157089	snRNA		4	-1	108522030	107
ENSMUSG00000077691	snoRNA	Gm25344	ENSMUST00000104503	snoRNA		17	-1	64944852	132
ENSMUSG00000087823	snRNA	Gm22281	ENSMUST00000157198	snRNA		1	-1	63575590	103
ENSMUSG00000087726	misc_RNA	Gm26275	ENSMUST00000157101	misc_RNA		3	-1	126152723	268
ENSMUSG00000095502	snRNA	Gm22450	ENSMUST00000179641	snRNA		5	1	135875657	107
ENSMUSG00000095477	snoRNA	Gm25076	ENSMUST00000104098	snoRNA		5	1	118266449	132
ENSMUSG00000088421	misc_RNA	Gm22552	ENSMUST00000157796	misc_RNA		X	-1	133376553	337
ENSMUSG00000077344	snoRNA	Gm24326	ENSMUST00000104156	snoRNA		12	1	27631803	125
ENSMUSG00000089096	snRNA	Gm25657	ENSMUST00000158471	snRNA		10	1	84614719	95
ENSMUSG00000076966	miRNA	Mir466b-2	ENSMUST00000103778	miRNA		2	1	10498685	82
ENSMUSG00000077236	snoRNA	Gm22439	ENSMUST00000104048	snoRNA		2	1	104578945	132
ENSMUSG00000080432	miRNA	Gm23178	ENSMUST00000116782	miRNA		14	-1	67274963	95
ENSMUSG00000104570	miRNA	Gm44463	ENSMUST00000198895	miRNA		2	-1	74701142	137
ENSMUSG00000089553	snoRNA	Gm24176	ENSMUST00000158928	snoRNA		1	1	23245211	121
ENSMUSG00000077487	snoRNA	Gm23440	ENSMUST00000104299	snoRNA		3	1	78979922	130
ENSMUSG00000104743	miRNA	Gm44493	ENSMUST00000104868	miRNA		8	1	27615817	88
ENSMUSG00000095778	snRNA	Gm23016	ENSMUST00000158431	snRNA		18	1	64728066	62
ENSMUSG00000084636	misc_RNA	Gm23884	ENSMUST00000122687	misc_RNA		7	1	95171864	294
ENSMUSG00000088923	snoRNA	Gm24295	ENSMUST00000158298	snoRNA		13	1	82050751	131
ENSMUSG00000088036	miRNA	Gm24993	ENSMUST00000157411	miRNA		X	1	104076971	91
ENSMUSG00000092914	miRNA	Gm24084	ENSMUST00000175173	miRNA		10	1	52032251	137
ENSMUSG00000096865	snoRNA	Gm23313	ENSMUST00000178931	snoRNA		7	-1	59759119	94
ENSMUSG00000093289	snoRNA	Snord92	ENSMUST00000175548	snoRNA		17	1	71631281	85
ENSMUSG00000095350	rRNA	Gm23284	ENSMUST00000178069	rRNA		8	-1	123620359	119
ENSMUSG00000093142	miRNA	Mir3106	ENSMUST00000175401	miRNA		8	-1	16168838	82
ENSMUSG00000094390	miRNA	Gm23400	ENSMUST00000174994	miRNA		17	1	82235877	102
ENSMUSG00000093960	rRNA	n-R5s127	ENSMUST00000179185	rRNA		8	-1	123584653	119
ENSMUSG00000088528	snRNA	Gm26084	ENSMUST00000157903	snRNA		4	-1	41345951	104
ENSMUSG00000088471	snRNA	Gm23080	ENSMUST00000157846	snRNA		16	-1	36137974	103
ENSMUSG00000077169	snoRNA	Gm25396	ENSMUST00000103981	snoRNA		18	-1	31466367	133
ENSMUSG00000088418	snoRNA	Gm26162	ENSMUST00000157793	snoRNA		4	1	121509472	132
ENSMUSG00000089622	rRNA	Gm25447	ENSMUST00000158997	rRNA		17	1	31059604	128
ENSMUSG00000098410	miRNA	Mir1957b	ENSMUST00000184608	miRNA		8	1	111450200	123
ENSMUSG00000077288	snoRNA	Gm25765	ENSMUST00000104100	snoRNA		5	-1	83648954	132
ENSMUSG00000089445	snoRNA	Gm22530	ENSMUST00000158820	snoRNA		6	1	81806791	118
ENSMUSG00000094656	rRNA	Gm25358	ENSMUST00000157189	rRNA		X	1	102801184	101
ENSMUSG00000088825	misc_RNA	Gm25223	ENSMUST00000158200	misc_RNA		2	-1	49906880	110
ENSMUSG00000096057	snoRNA	Gm25944	ENSMUST00000178758	snoRNA		7	-1	59731316	94
ENSMUSG00000098465	miRNA	Mir1668	ENSMUST00000184114	miRNA		8	-1	83723984	107
ENSMUSG00000098743	misc_RNA	Gm27927	ENSMUST00000183791	misc_RNA		X	-1	103469796	126
ENSMUSG00000077338	snRNA	Gm23294	ENSMUST00000104150	snRNA		17	-1	32800730	164
ENSMUSG00000088638	snoRNA	Gm25846	ENSMUST00000158013	snoRNA		3	1	75714790	135
ENSMUSG00000076316	miRNA	Mir673	ENSMUST00000102361	miRNA		12	1	109571990	91
ENSMUSG00000089257	snRNA	Gm25718	ENSMUST00000158632	snRNA		18	1	81026773	118
ENSMUSG00000088060	snoRNA	Gm24475	ENSMUST00000157435	snoRNA		17	1	74000860	143
ENSMUSG00000098721	miRNA	Mir6357	ENSMUST00000184246	miRNA		18	1	70516786	104
ENSMUSG00000098764	miRNA	Mir7667	ENSMUST00000183866	miRNA		17	1	29595538	63
ENSMUSG00000088357	misc_RNA	Gm24011	ENSMUST00000157732	misc_RNA		15	1	86149584	268
ENSMUSG00000076360	miRNA	Gm24047	ENSMUST00000102405	miRNA		16	1	56070563	104
ENSMUSG00000098588	miRNA	Mir6340	ENSMUST00000183857	miRNA		2	-1	173701148	119
ENSMUSG00000088555	snRNA	Gm22098	ENSMUST00000157930	snRNA		7	-1	45875631	85
ENSMUSG00000064737	snRNA	Gm23056	ENSMUST00000082803	snRNA		1	-1	128886019	111
ENSMUSG00000092668	miRNA	Gm22401	ENSMUST00000174927	miRNA		14	1	100700621	117
ENSMUSG00000065798	snRNA	Gm25518	ENSMUST00000083864	snRNA		2	-1	25006258	107
ENSMUSG00000084643	misc_RNA	Gm24385	ENSMUST00000122694	misc_RNA		18	-1	16221368	350
ENSMUSG00000089612	snRNA	Gm22708	ENSMUST00000158987	snRNA		2	-1	181426037	103
ENSMUSG00000064919	snRNA	Gm22572	ENSMUST00000082985	snRNA		2	1	25208623	105
ENSMUSG00000077795	snoRNA	Gm25561	ENSMUST00000104607	snoRNA		2	1	160996777	125
ENSMUSG00000084592	miRNA	Mir1898	ENSMUST00000122643	miRNA		15	1	12171492	83
ENSMUSG00000094730	snRNA	Gm26178	ENSMUST00000177706	snRNA		15	-1	57239113	107
ENSMUSG00000064740	snoRNA	Gm24706	ENSMUST00000082806	snoRNA		X	-1	82401227	137
ENSMUSG00000089506	misc_RNA	Gm23476	ENSMUST00000158881	misc_RNA		16	1	8203975	274
ENSMUSG00000076304	miRNA	Gm23062	ENSMUST00000102349	miRNA		16	-1	94169411	110
ENSMUSG00000089407	snRNA	Gm24878	ENSMUST00000158782	snRNA		5	-1	36666512	104
ENSMUSG00000076141	miRNA	Mir693	ENSMUST00000102187	miRNA		17	1	46231531	89
ENSMUSG00000096309	miRNA	Gm25208	ENSMUST00000178964	miRNA		14	-1	42274539	121
ENSMUSG00000076233	miRNA	Gm22761	ENSMUST00000102278	miRNA		2	-1	103843513	96
ENSMUSG00000077528	snoRNA	Gm25376	ENSMUST00000104340	snoRNA		10	1	103121236	133
ENSMUSG00000092843	miRNA	Gm24332	ENSMUST00000175102	miRNA		2	1	84928074	102
ENSMUSG00000098910	miRNA	Mir6416	ENSMUST00000183664	miRNA		7	-1	64250099	117
ENSMUSG00000106027	miRNA	Mir669a-7	ENSMUST00000180364	miRNA		2	1	10486653	87
ENSMUSG00000065660	rRNA	n-R5s170	ENSMUST00000083726	rRNA		5	-1	22430443	113
ENSMUSG00000096759	snoRNA	Snord116l2	ENSMUST00000178675	snoRNA		7	-1	59877026	94
ENSMUSG00000089197	snoRNA	Gm25767	ENSMUST00000158572	snoRNA		5	1	36671658	124
ENSMUSG00000105756	miRNA	Gm44467	ENSMUST00000198722	miRNA		11	1	72953107	90
ENSMUSG00000077504	snRNA	Gm24234	ENSMUST00000104316	snRNA		4	-1	63631788	107
ENSMUSG00000089302	snoRNA	Gm26208	ENSMUST00000158677	snoRNA		8	1	24680814	124
ENSMUSG00000092730	snoRNA	Snora24	ENSMUST00000174989	snoRNA		3	-1	123508066	130
ENSMUSG00000093946	rRNA	Gm22832	ENSMUST00000178022	rRNA		Y	-1	74749247	108
ENSMUSG00000064983	snRNA	Gm25258	ENSMUST00000083049	snRNA		2	-1	133584421	107
ENSMUSG00000090441	protein_coding	Gm17651	ENSMUST00000166227	protein_coding	principal1	3	-1	97674694	36
ENSMUSG00000092979	miRNA	Gm25069	ENSMUST00000175238	miRNA		17	1	78302661	86
ENSMUSG00000077025	miRNA	Mir493	ENSMUST00000103837	miRNA		12	1	109580233	83
ENSMUSG00000065561	miRNA	Mir369	ENSMUST00000083627	miRNA		12	1	109743418	79
ENSMUSG00000098602	miRNA	Mir6946	ENSMUST00000183515	miRNA		14	1	20690635	69
ENSMUSG00000089061	misc_RNA	Gm22839	ENSMUST00000158436	misc_RNA		6	1	46037776	304
ENSMUSG00000089438	snRNA	Gm23194	ENSMUST00000158813	snRNA		11	1	69240599	105
ENSMUSG00000096455	snoRNA	Gm23311	ENSMUST00000104152	snoRNA		11	-1	71288558	134
ENSMUSG00000089036	snoRNA	Gm22158	ENSMUST00000158411	snoRNA		16	1	19307699	126
ENSMUSG00000077402	snoRNA	Gm25418	ENSMUST00000104214	snoRNA		18	1	90504615	129
ENSMUSG00000073807	pseudogene	Gm10581	ENSMUST00000097986	pseudogene		4	-1	88771784	231
ENSMUSG00000089278	snoRNA	Gm24553	ENSMUST00000158653	snoRNA		1	-1	107440177	131
ENSMUSG00000077965	miRNA	Gm24605	ENSMUST00000104772	miRNA		7	-1	4442015	96
ENSMUSG00000088836	snoRNA	Gm23546	ENSMUST00000158211	snoRNA		2	-1	33211941	137
ENSMUSG00000099268	miRNA	Gm27773	ENSMUST00000184087	miRNA		16	-1	91944148	78
ENSMUSG00000077793	snRNA	Gm25565	ENSMUST00000104605	snRNA		Y	-1	1308377	105
ENSMUSG00000077617	snoRNA	Gm25501	ENSMUST00000104429	snoRNA		3	1	127005369	132
ENSMUSG00000098489	miRNA	Mir7678	ENSMUST00000185076	miRNA		2	-1	164354383	71
ENSMUSG00000104603	miRNA	Gm47314	ENSMUST00000197244	miRNA		2	1	122028642	68
ENSMUSG00000096949	protein_coding	Gm26897	ENSMUST00000180627	protein_coding	principal1	5	1	111733924	93
ENSMUSG00000093120	miRNA	Mir3474	ENSMUST00000175379	miRNA		2	1	158638583	58
ENSMUSG00000098381	miRNA	Mir7225	ENSMUST00000184178	miRNA		3	-1	97690562	54
ENSMUSG00000065804	snRNA	Gm23039	ENSMUST00000083870	snRNA		11	-1	47912545	161
ENSMUSG00000084654	rRNA	n-R5s150	ENSMUST00000122705	rRNA		7	1	6512235	108
ENSMUSG00000064496	snoRNA	DQ267101	ENSMUST00000082562	snoRNA		12	1	109651424	73
ENSMUSG00000116275	protein_coding	Zc3h11a	ENSMUST00000027736	protein_coding	principal1	1	-1	133661380	4395
ENSMUSG00000098566	misc_RNA	Gm27761	ENSMUST00000184091	misc_RNA		2	1	45111171	131
ENSMUSG00000084520	snRNA	CAAA01124250.1	ENSMUST00000122571	snRNA		GL456216.1	-1	50978	149
ENSMUSG00000088039	snoRNA	Gm24994	ENSMUST00000157414	snoRNA		12	1	78165546	121
ENSMUSG00000088181	misc_RNA	Gm22217	ENSMUST00000157556	misc_RNA		16	1	65961225	313
ENSMUSG00000118642	pseudogene	CT010467.2	ENSMUST00000205406	pseudogene		17	-1	39848827	714
ENSMUSG00000088900	snoRNA	Gm25436	ENSMUST00000158275	snoRNA		6	-1	68257538	145
ENSMUSG00000064493	snoRNA	Snora28	ENSMUST00000082559	snoRNA		12	1	111540941	127
ENSMUSG00000099323	misc_RNA	Gm28016	ENSMUST00000184594	misc_RNA		13	-1	108498970	196
ENSMUSG00000092919	miRNA	Gm24080	ENSMUST00000175178	miRNA		15	-1	14735284	232
ENSMUSG00000084713	miRNA	Gm24627	ENSMUST00000122764	miRNA		X	1	147106939	138
ENSMUSG00000080473	miRNA	Gm25315	ENSMUST00000116823	miRNA		5	1	135207988	121
ENSMUSG00000065663	snoRNA	Gm22579	ENSMUST00000083729	snoRNA		9	1	15316676	133
ENSMUSG00000088212	snRNA	Gm22082	ENSMUST00000157587	snRNA		19	1	34796178	161
ENSMUSG00000080408	miRNA	Gm23654	ENSMUST00000116758	miRNA		15	-1	37371447	126
ENSMUSG00000078197	protein_coding	Gm17374	ENSMUST00000104994	protein_coding	principal1	2	1	140152043	102
ENSMUSG00000087760	snRNA	Gm23980	ENSMUST00000157135	snRNA		15	-1	23646577	158
ENSMUSG00000065470	miRNA	Mir149	ENSMUST00000083536	miRNA		1	1	92850378	66
ENSMUSG00000098997	miRNA	Mir6901	ENSMUST00000185062	miRNA		1	1	93274549	62
ENSMUSG00000065526	miRNA	Mir337	ENSMUST00000083592	miRNA		12	1	109585789	97
ENSMUSG00000095220	snoRNA	Gm23560	ENSMUST00000177782	snoRNA		7	-1	59617690	79
ENSMUSG00000065244	snRNA	Gm22296	ENSMUST00000083310	snRNA		12	-1	55910923	103
ENSMUSG00000077480	snoRNA	Gm23439	ENSMUST00000104292	snoRNA		2	-1	107886639	132
ENSMUSG00000093358	miRNA	Mir3063	ENSMUST00000175617	miRNA		11	-1	95963383	92
ENSMUSG00000077142	snoRNA	Gm22937	ENSMUST00000103954	snoRNA		10	1	71898036	131
ENSMUSG00000078620	protein_coding	Gm10964	ENSMUST00000106852	protein_coding	principal1	3	1	103739366	120
ENSMUSG00000076357	miRNA	Mir653	ENSMUST00000102402	miRNA		6	-1	3721385	85
ENSMUSG00000077334	snRNA	Gm23013	ENSMUST00000104146	snRNA		6	-1	14457150	106
ENSMUSG00000096866	snRNA	Gm22260	ENSMUST00000178643	snRNA		1	-1	25279551	107
ENSMUSG00000077804	snoRNA	Gm24403	ENSMUST00000104616	snoRNA		3	-1	89049127	130
ENSMUSG00000105455	miRNA	Gm44499	ENSMUST00000198224	miRNA		X	1	28606514	86
ENSMUSG00000054745	protein_coding	Gm9955	ENSMUST00000067987	protein_coding	principal1	18	-1	24709348	309
ENSMUSG00000067017	pseudogene	Capza1-ps1	ENSMUST00000086725	pseudogene		1	1	105455971	2858
ENSMUSG00000064573	snoRNA	Gm25802	ENSMUST00000082639	snoRNA		3	1	100303288	77
ENSMUSG00000088748	snRNA	Gm23219	ENSMUST00000158123	snRNA		11	1	78824387	87
ENSMUSG00000093886	miRNA	Gm23158	ENSMUST00000175076	miRNA		4	-1	133558949	126
ENSMUSG00000088288	misc_RNA	Gm23591	ENSMUST00000157663	misc_RNA		16	1	68901896	286
ENSMUSG00000065648	snRNA	Gm25895	ENSMUST00000083714	snRNA		X	-1	153915215	100
ENSMUSG00000093076	miRNA	Mir3082	ENSMUST00000175335	miRNA		17	-1	25831428	64
ENSMUSG00000089491	snoRNA	Gm26363	ENSMUST00000158866	snoRNA		5	-1	100056991	83
ENSMUSG00000094265	rRNA	n-R5s109	ENSMUST00000179195	rRNA		8	-1	123554178	119
ENSMUSG00000098570	misc_RNA	Gm27444	ENSMUST00000184157	misc_RNA		6	1	17905707	137
ENSMUSG00000098683	misc_RNA	Gm27817	ENSMUST00000184302	misc_RNA		6	1	52247421	233
ENSMUSG00000088779	snRNA	Gm26034	ENSMUST00000158154	snRNA		1	1	132100639	116
ENSMUSG00000065706	snoRNA	Gm22830	ENSMUST00000083772	snoRNA		9	-1	85772480	130
ENSMUSG00000092903	misc_RNA	Gm27896	ENSMUST00000175162	misc_RNA		6	1	57565793	317
ENSMUSG00000095728	protein_coding	AC125178.3	ENSMUST00000179146	protein_coding		JH584298.1	-1	170838	1218
ENSMUSG00000096411	miRNA	Gm24721	ENSMUST00000103849	miRNA		4	1	124735839	110
ENSMUSG00000094296	protein_coding	Gm21798	ENSMUST00000180105	protein_coding	principal1	15	1	64817694	261
ENSMUSG00000088624	snoRNA	Gm23317	ENSMUST00000157999	snoRNA		2	-1	97272339	129
ENSMUSG00000105908	miRNA	Mir6920	ENSMUST00000195888	miRNA		11	1	53409197	71
ENSMUSG00000106017	miRNA	Gm44322	ENSMUST00000196830	miRNA		12	-1	109728222	115
ENSMUSG00000065443	miRNA	Mir196b	ENSMUST00000083509	miRNA		6	-1	52230165	85
ENSMUSG00000106597	miRNA	Mir7021	ENSMUST00000197026	miRNA		4	-1	143136162	63
ENSMUSG00000089088	miRNA	Gm24001	ENSMUST00000158463	miRNA		1	1	43036845	85
ENSMUSG00000077730	snoRNA	Gm23609	ENSMUST00000104542	snoRNA		9	-1	78014098	127
ENSMUSG00000105821	miRNA	Gm44465	ENSMUST00000199536	miRNA		2	-1	113476821	114
ENSMUSG00000079416	protein_coding	Gm11111	ENSMUST00000112956	protein_coding	principal1	5	1	98552695	99
ENSMUSG00000065845	snRNA	Gm25189	ENSMUST00000083911	snRNA		2	1	117248271	164
ENSMUSG00000098939	misc_RNA	Gm27919	ENSMUST00000185163	misc_RNA		9	-1	98705836	107
ENSMUSG00000077256	snoRNA	Gm26081	ENSMUST00000104068	snoRNA		3	1	46289833	132
ENSMUSG00000098917	miRNA	Mir7654	ENSMUST00000185082	miRNA		8	-1	8690162	70
ENSMUSG00000093476	miRNA	Gm22355	ENSMUST00000175531	miRNA		2	-1	167644459	96
ENSMUSG00000077451	snoRNA	Gm25916	ENSMUST00000104263	snoRNA		16	1	78240258	131
ENSMUSG00000089102	snRNA	Gm23113	ENSMUST00000158477	snRNA		19	1	41975188	99
ENSMUSG00000093160	miRNA	Gm22773	ENSMUST00000175419	miRNA		2	-1	172864341	78
ENSMUSG00000065807	snRNA	Gm23038	ENSMUST00000083873	snRNA		3	-1	155788468	104
ENSMUSG00000088835	snoRNA	Gm23547	ENSMUST00000158210	snoRNA		6	1	124715232	271
ENSMUSG00000088423	snoRNA	Gm22554	ENSMUST00000157798	snoRNA		10	-1	36775931	147
ENSMUSG00000084463	misc_RNA	Gm22959	ENSMUST00000122514	misc_RNA		12	1	71724652	303
ENSMUSG00000091109	protein_coding	Gm17622	ENSMUST00000165358	protein_coding	principal1	13	1	96490733	45
ENSMUSG00000088632	misc_RNA	Gm22314	ENSMUST00000158007	misc_RNA		8	1	123523260	281
ENSMUSG00000099088	miRNA	Gm27920	ENSMUST00000183953	miRNA		10	-1	123196971	96
ENSMUSG00000065616	miRNA	Mir375	ENSMUST00000083682	miRNA		1	-1	74900721	64
ENSMUSG00000098457	miRNA	Mir8097	ENSMUST00000185150	miRNA		15	-1	36240164	119
ENSMUSG00000079333	protein_coding	Gm11096	ENSMUST00000168858	protein_coding	principal1	17	1	81441763	45
ENSMUSG00000089028	snRNA	Gm25010	ENSMUST00000158403	snRNA		4	-1	43201213	65
ENSMUSG00000077545	snoRNA	Gm22018	ENSMUST00000104357	snoRNA		8	1	68010340	131
ENSMUSG00000089475	misc_RNA	Gm25363	ENSMUST00000158850	misc_RNA		5	-1	24820837	245
ENSMUSG00000095482	snRNA	Gm25739	ENSMUST00000082886	snRNA		18	-1	51254275	107
ENSMUSG00000065301	snRNA	Gm23248	ENSMUST00000083367	snRNA		9	1	65900201	108
ENSMUSG00000095284	snRNA	Gm22550	ENSMUST00000179774	snRNA		X	1	54118995	107
ENSMUSG00000098565	miRNA	Gm27760	ENSMUST00000185048	miRNA		15	1	5864306	114
ENSMUSG00000077327	snRNA	Gm25938	ENSMUST00000104139	snRNA		4	-1	144765792	166
ENSMUSG00000093173	miRNA	Gm23872	ENSMUST00000175432	miRNA		12	-1	108721924	77
ENSMUSG00000096660	snoRNA	Gm22863	ENSMUST00000180265	snoRNA		7	-1	59744005	94
ENSMUSG00000099302	misc_RNA	Gm27421	ENSMUST00000184729	misc_RNA		2	-1	73827831	167
ENSMUSG00000095467	miRNA	Gm22243	ENSMUST00000178754	miRNA		9	-1	115411353	120
ENSMUSG00000094472	protein_coding	Gm21897	ENSMUST00000178312	protein_coding	principal1	16	1	15317458	1500
ENSMUSG00000096174	miRNA	Gm22991	ENSMUST00000178126	miRNA		4	1	155911630	121
ENSMUSG00000084558	snRNA	Gm24836	ENSMUST00000122609	snRNA		1	1	180832769	108
ENSMUSG00000105435	miRNA	Gm44355	ENSMUST00000200417	miRNA		9	1	75911422	104
ENSMUSG00000096388	miRNA	Gm25355	ENSMUST00000178456	miRNA		4	1	8235582	101
ENSMUSG00000048406	pseudogene	B330016D10Rik	ENSMUST00000049927	pseudogene		4	1	141546189	1701
ENSMUSG00000098475	miRNA	Mir6982	ENSMUST00000184354	miRNA		18	1	60958073	68
ENSMUSG00000098766	miRNA	Mir6386	ENSMUST00000183558	miRNA		9	-1	92267361	104
ENSMUSG00000095347	miRNA	Gm26095	ENSMUST00000179270	miRNA		16	1	5227920	110
ENSMUSG00000077250	snoRNA	Gm26075	ENSMUST00000104062	snoRNA		6	-1	8501356	121
ENSMUSG00000077356	snoRNA	Gm26288	ENSMUST00000104168	snoRNA		7	-1	58148227	132
ENSMUSG00000096271	protein_coding	Ccl21b	ENSMUST00000178765	protein_coding		GL456350.1	-1	212455	867
ENSMUSG00000065876	snRNA	Gm25682	ENSMUST00000083942	snRNA		10	1	10100953	164
ENSMUSG00000087748	rRNA	Gm25154	ENSMUST00000157123	rRNA		5	1	65136302	119
ENSMUSG00000089174	snoRNA	Gm22434	ENSMUST00000158549	snoRNA		1	1	163118227	122
ENSMUSG00000064677	snRNA	Gm22809	ENSMUST00000082743	snRNA		7	-1	128061860	156
ENSMUSG00000095175	snoRNA	Gm22722	ENSMUST00000157467	snoRNA		6	-1	123540032	132
ENSMUSG00000104813	miRNA	Mir451b	ENSMUST00000196157	miRNA		11	-1	78073241	72
ENSMUSG00000088369	misc_RNA	Gm23501	ENSMUST00000157744	misc_RNA		X	-1	163069869	256
ENSMUSG00000065518	miRNA	Mir423	ENSMUST00000083584	miRNA		11	-1	77078172	109
ENSMUSG00000077153	snoRNA	Gm24580	ENSMUST00000103965	snoRNA		8	1	63878196	131
ENSMUSG00000095876	miRNA	Gm25933	ENSMUST00000178943	miRNA		13	1	62383237	108
ENSMUSG00000096075	miRNA	Gm25349	ENSMUST00000177728	miRNA		7	-1	4388561	110
ENSMUSG00000088459	miRNA	Mir1941	ENSMUST00000157834	miRNA		15	1	101369352	83
ENSMUSG00000079039	protein_coding	Gm11037	ENSMUST00000110225	protein_coding	principal1	2	1	131133497	60
ENSMUSG00000092727	miRNA	Mir3062	ENSMUST00000174986	miRNA		11	-1	68990678	105
ENSMUSG00000105210	miRNA	Mir3544	ENSMUST00000200030	miRNA		12	-1	109585873	61
ENSMUSG00000087839	snRNA	Gm23955	ENSMUST00000157214	snRNA		13	-1	96104562	100
ENSMUSG00000077858	miRNA	Gm25063	ENSMUST00000104666	miRNA		X	-1	12870362	94
ENSMUSG00000065665	snRNA	Gm22577	ENSMUST00000083731	snRNA		3	-1	92962116	109
ENSMUSG00000064452	snoRNA	Gm24564	ENSMUST00000082518	snoRNA		12	1	109631074	75
ENSMUSG00000099300	miRNA	Mir6356	ENSMUST00000183541	miRNA		18	1	68739400	102
ENSMUSG00000088773	rRNA	Gm26041	ENSMUST00000158148	rRNA		X	-1	76788529	108
ENSMUSG00000091441	protein_coding	Gm17387	ENSMUST00000170892	protein_coding	principal1	7	1	141029131	72
ENSMUSG00000077728	snoRNA	Gm22899	ENSMUST00000104540	snoRNA		3	-1	37995235	131
ENSMUSG00000088884	snoRNA	Gm24216	ENSMUST00000158259	snoRNA		3	-1	99124302	117
ENSMUSG00000092677	miRNA	Mir5106	ENSMUST00000174936	miRNA		4	-1	44221267	73
ENSMUSG00000104773	miRNA	Mir7657	ENSMUST00000196051	miRNA		3	-1	122541681	57
ENSMUSG00000065191	snRNA	Gm23458	ENSMUST00000083257	snRNA		5	1	123360832	169
ENSMUSG00000098886	miRNA	Mir6385	ENSMUST00000184295	miRNA		9	1	58221150	105
ENSMUSG00000088618	rRNA	Gm24808	ENSMUST00000157993	rRNA		1	-1	165785951	118
ENSMUSG00000088777	scaRNA	Gm26039	ENSMUST00000158152	scaRNA		5	1	92429785	144
ENSMUSG00000098769	miRNA	Mir8103	ENSMUST00000183945	miRNA		11	1	97063768	107
ENSMUSG00000094939	protein_coding	Gm21773	ENSMUST00000179355	protein_coding	principal1	Y	-1	25309360	1083
ENSMUSG00000099324	miRNA	Mir8115	ENSMUST00000184992	miRNA		5	1	122682597	119
ENSMUSG00000096343	rRNA	n-R5s133	ENSMUST00000179275	rRNA		8	-1	123594872	119
ENSMUSG00000077410	snoRNA	Gm23750	ENSMUST00000104222	snoRNA		3	-1	114824285	132
ENSMUSG00000095764	snoRNA	Gm25840	ENSMUST00000177821	snoRNA		7	-1	59554059	79
ENSMUSG00000084532	rRNA	n-R5s218	ENSMUST00000122583	rRNA		1	-1	149734858	109
ENSMUSG00000088991	snRNA	Gm22768	ENSMUST00000158366	snRNA		13	1	112291121	153
ENSMUSG00000106513	miRNA	Gm44348	ENSMUST00000200165	miRNA		8	1	86586962	122
ENSMUSG00000080522	miRNA	Gm23881	ENSMUST00000116872	miRNA		14	-1	48364402	66
ENSMUSG00000072768	pseudogene	Gm10418	ENSMUST00000100943	pseudogene		11	-1	70540600	576
ENSMUSG00000064673	snRNA	Gm22805	ENSMUST00000082739	snRNA		9	-1	46630219	107
ENSMUSG00000098943	snoRNA	Rnu3b1	ENSMUST00000183812	snoRNA		11	1	87443237	216
ENSMUSG00000099145	miRNA	Mir8116	ENSMUST00000184134	miRNA		5	1	137293780	97
ENSMUSG00000092753	rRNA	Gm26400	ENSMUST00000175012	rRNA		4	1	58938025	85
ENSMUSG00000098793	misc_RNA	Gm27286	ENSMUST00000184934	misc_RNA		5	1	100429329	179
ENSMUSG00000075837	snRNA	Gm22005	ENSMUST00000082795	snRNA		2	-1	3291518	141
ENSMUSG00000096659	snRNA	Gm25679	ENSMUST00000101973	snRNA		12	-1	54719326	164
ENSMUSG00000095260	snRNA	Gm25890	ENSMUST00000177643	snRNA		3	-1	96486719	165
ENSMUSG00000077396	snRNA	Gm24340	ENSMUST00000104208	snRNA		2	1	7350097	97
ENSMUSG00000057605	processed_pseudogene	Gm6807	ENSMUST00000077435	processed_pseudogene		19	-1	45451195	888
ENSMUSG00000098844	miRNA	Mir6992	ENSMUST00000183342	miRNA		19	1	8742971	109
ENSMUSG00000096147	snRNA	Gm25818	ENSMUST00000083282	snRNA		6	1	53433974	164
ENSMUSG00000093983	snRNA	Gm25431	ENSMUST00000101978	snRNA		19	-1	3137090	107
ENSMUSG00000065601	miRNA	Mir146	ENSMUST00000083667	miRNA		11	-1	43374461	65
ENSMUSG00000087939	snRNA	Gm23676	ENSMUST00000157314	snRNA		12	1	4749752	105
ENSMUSG00000084459	snoRNA	Gm24598	ENSMUST00000122510	snoRNA		X	1	64496584	74
ENSMUSG00000065283	snoRNA	Gm24454	ENSMUST00000083349	snoRNA		11	-1	79893715	132
ENSMUSG00000095111	snoRNA	Gm23713	ENSMUST00000157353	snoRNA		13	1	62136762	70
ENSMUSG00000099209	misc_RNA	Gm27941	ENSMUST00000183418	misc_RNA		5	-1	8997427	142
ENSMUSG00000088909	snoRNA	Gm50111	ENSMUST00000158284	snoRNA		19	1	5435900	66
ENSMUSG00000093221	miRNA	Mir3105	ENSMUST00000175480	miRNA		7	1	144009254	85
ENSMUSG00000099246	misc_RNA	Gm27540	ENSMUST00000184950	misc_RNA		2	1	13226828	187
ENSMUSG00000093995	miRNA	Gm26426	ENSMUST00000177866	miRNA		2	1	10494321	123
ENSMUSG00000087886	misc_RNA	Gm23599	ENSMUST00000157261	misc_RNA		1	-1	165498249	251
ENSMUSG00000099291	snoRNA	Rnu3b3	ENSMUST00000093738	snoRNA		11	1	87448627	216
ENSMUSG00000088668	snRNA	Gm25335	ENSMUST00000158043	snRNA		5	-1	19515507	103
ENSMUSG00000080383	miRNA	Gm22103	ENSMUST00000116733	miRNA		X	1	56070664	121
ENSMUSG00000077387	snRNA	Gm22656	ENSMUST00000104199	snRNA		5	1	25510865	171
ENSMUSG00000098419	miRNA	Mir6963	ENSMUST00000183535	miRNA		15	-1	103350525	71
ENSMUSG00000089334	snoRNA	Gm24349	ENSMUST00000158709	snoRNA		1	1	53100050	101
ENSMUSG00000095993	protein_coding	Gm21060	ENSMUST00000179346	protein_coding	principal1	19	-1	61297069	168
ENSMUSG00000084422	snoRNA	Gm25108	ENSMUST00000122473	snoRNA		6	1	42275650	78
ENSMUSG00000099075	miRNA	Mir7674	ENSMUST00000184964	miRNA		2	1	32050946	63
ENSMUSG00000088686	misc_RNA	Gm24857	ENSMUST00000158061	misc_RNA		12	1	70935328	310
ENSMUSG00000088229	misc_RNA	Gm22604	ENSMUST00000157604	misc_RNA		3	1	9402175	311
ENSMUSG00000077171	snoRNA	Gm25761	ENSMUST00000103983	snoRNA		5	-1	20114447	128
ENSMUSG00000088343	snRNA	Gm22339	ENSMUST00000157718	snRNA		10	-1	104224899	62
ENSMUSG00000065336	snoRNA	Snora34	ENSMUST00000083402	snoRNA		15	-1	98519853	138
ENSMUSG00000098874	misc_RNA	Gm27960	ENSMUST00000183445	misc_RNA		6	1	17694902	184
ENSMUSG00000095581	snoRNA	Gm22630	ENSMUST00000177781	snoRNA		7	-1	59464498	79
ENSMUSG00000093124	miRNA	Gm24366	ENSMUST00000175383	miRNA		8	-1	122471712	86
ENSMUSG00000077004	miRNA	Gm23876	ENSMUST00000103816	miRNA		2	-1	130531744	67
ENSMUSG00000077050	miRNA	Gm24544	ENSMUST00000103862	miRNA		3	1	73146849	110
ENSMUSG00000096166	snoRNA	Gm24638	ENSMUST00000179807	snoRNA		9	-1	101393110	132
ENSMUSG00000093365	miRNA	Gm22801	ENSMUST00000175624	miRNA		4	1	103564203	84
ENSMUSG00000093854	snoRNA	Gm24310	ENSMUST00000101896	snoRNA		7	-1	59518489	79
ENSMUSG00000080486	snoRNA	Snord100	ENSMUST00000116836	snoRNA		10	-1	23785823	74
ENSMUSG00000096748	miRNA	Gm22635	ENSMUST00000116962	miRNA		2	1	10492421	126
ENSMUSG00000084744	snoRNA	Gm25291	ENSMUST00000122795	snoRNA		11	-1	51737922	144
ENSMUSG00000089082	misc_RNA	Gm24860	ENSMUST00000158457	misc_RNA		9	-1	111244867	276
ENSMUSG00000064395	snRNA	Gm23623	ENSMUST00000082461	snRNA		1	-1	130595676	107
ENSMUSG00000065253	snRNA	Gm23970	ENSMUST00000083319	snRNA		2	1	20280519	107
ENSMUSG00000065126	snoRNA	Snord104	ENSMUST00000083192	snoRNA		11	1	106500993	70
ENSMUSG00000080575	miRNA	Mir1190	ENSMUST00000116925	miRNA		12	-1	101021768	96
ENSMUSG00000105563	miRNA	Gm44408	ENSMUST00000200205	miRNA		7	1	29045628	66
ENSMUSG00000089152	snoRNA	Gm22424	ENSMUST00000158527	snoRNA		2	1	130071724	87
ENSMUSG00000088481	snoRNA	Gm23644	ENSMUST00000157856	snoRNA		3	-1	77105285	77
ENSMUSG00000098478	snRNA	Gm27851	ENSMUST00000183529	snRNA		14	1	18060275	63
ENSMUSG00000065185	snRNA	Gm25137	ENSMUST00000083251	snRNA		4	1	116674153	110
ENSMUSG00000093334	miRNA	Gm22118	ENSMUST00000175593	miRNA		13	-1	107829280	171
ENSMUSG00000093239	miRNA	Gm24106	ENSMUST00000175498	miRNA		9	1	64225523	127
ENSMUSG00000088291	snRNA	Gm26412	ENSMUST00000157666	snRNA		1	-1	171732114	55
ENSMUSG00000087883	snoRNA	Gm23602	ENSMUST00000157258	snoRNA		1	-1	100253048	132
ENSMUSG00000096387	snoRNA	Gm26488	ENSMUST00000178225	snoRNA		7	-1	59355230	79
ENSMUSG00000088366	misc_RNA	Gm23496	ENSMUST00000157741	misc_RNA		13	-1	9623627	248
ENSMUSG00000095885	snoRNA	Gm26432	ENSMUST00000179451	snoRNA		7	-1	59496247	79
ENSMUSG00000098858	miRNA	Mir6541	ENSMUST00000183649	miRNA		14	1	62865542	110
ENSMUSG00000084619	snRNA	Gm25045	ENSMUST00000122670	snRNA		9	-1	72121904	99
ENSMUSG00000098625	miRNA	Mir6953	ENSMUST00000184745	miRNA		15	1	76248191	68
ENSMUSG00000088052	rRNA	Gm26152	ENSMUST00000157427	rRNA		X	-1	102856391	101
ENSMUSG00000076030	miRNA	Gm22750	ENSMUST00000102076	miRNA		13	-1	8921438	103
ENSMUSG00000084649	rRNA	n-R5s76	ENSMUST00000122700	rRNA		10	-1	31317281	113
ENSMUSG00000098484	misc_RNA	Gm27280	ENSMUST00000185179	misc_RNA		6	1	52261154	59
ENSMUSG00000095891	protein_coding	Gm10717	ENSMUST00000075573	protein_coding		9	1	3025417	684
ENSMUSG00000077263	snoRNA	Gm24432	ENSMUST00000104075	snoRNA		18	1	34093445	126
ENSMUSG00000089115	snRNA	Gm25905	ENSMUST00000158490	snRNA		6	1	118834900	101
ENSMUSG00000089250	snRNA	Gm25713	ENSMUST00000158625	snRNA		15	-1	12158441	109
ENSMUSG00000076459	miRNA	Mir758	ENSMUST00000103260	miRNA		12	1	109712810	81
ENSMUSG00000088552	miRNA	Mir1957a	ENSMUST00000157927	miRNA		4	1	119129779	66
ENSMUSG00000080543	miRNA	Gm22709	ENSMUST00000116893	miRNA		18	1	5614473	111
ENSMUSG00000093226	miRNA	Gm25749	ENSMUST00000175485	miRNA		3	-1	80692313	111
ENSMUSG00000093301	miRNA	Gm23798	ENSMUST00000175560	miRNA		X	1	157191659	102
ENSMUSG00000098988	misc_RNA	Gm28008	ENSMUST00000184021	misc_RNA		6	1	17703231	186
ENSMUSG00000095818	miRNA	Gm24954	ENSMUST00000178831	miRNA		X	-1	89849503	110
ENSMUSG00000088879	snRNA	Gm25867	ENSMUST00000158254	snRNA		11	-1	79635413	103
ENSMUSG00000089014	snoRNA	Gm25520	ENSMUST00000158389	snoRNA		X	1	75101409	118
ENSMUSG00000088783	miRNA	Gm25374	ENSMUST00000158158	miRNA		5	1	75909827	101
ENSMUSG00000088709	misc_RNA	Gm25557	ENSMUST00000158084	misc_RNA		X	1	162693249	315
ENSMUSG00000076964	miRNA	Gm23252	ENSMUST00000103776	miRNA		10	-1	129582895	110
ENSMUSG00000093998	snRNA	Gm26500	ENSMUST00000101867	snRNA		17	-1	13250000	106
ENSMUSG00000087877	snRNA	Gm26103	ENSMUST00000157252	snRNA		3	1	131918259	95
ENSMUSG00000078025	miRNA	Mir466g	ENSMUST00000104831	miRNA		2	1	10514595	80
ENSMUSG00000089252	snoRNA	Gm25715	ENSMUST00000158627	snoRNA		16	1	86845470	125
ENSMUSG00000098342	misc_RNA	Gm27849	ENSMUST00000183673	misc_RNA		2	1	174295337	125
ENSMUSG00000095891	protein_coding	Gm10717	ENSMUST00000177601	protein_coding	alternative2	9	1	3026151	645
ENSMUSG00000106138	miRNA	Gm44392	ENSMUST00000196758	miRNA		12	-1	72475967	115
ENSMUSG00000077990	miRNA	Gm23134	ENSMUST00000104797	miRNA		2	-1	157562447	87
ENSMUSG00000096080	miRNA	Gm24710	ENSMUST00000175235	miRNA		10	1	37931680	101
ENSMUSG00000084475	misc_RNA	Gm25782	ENSMUST00000122526	misc_RNA		16	-1	8449786	289
ENSMUSG00000077666	snRNA	Gm26146	ENSMUST00000104478	snRNA		9	1	84188355	185
ENSMUSG00000088854	snRNA	Gm24725	ENSMUST00000158229	snRNA		11	1	95921102	125
ENSMUSG00000084516	miRNA	Mir1902	ENSMUST00000122567	miRNA		2	-1	104428940	80
ENSMUSG00000077462	snoRNA	Gm26417	ENSMUST00000104274	snoRNA		X	1	74624426	135
ENSMUSG00000098442	miRNA	Mir6959	ENSMUST00000184827	miRNA		15	-1	89305732	75
ENSMUSG00000096307	rRNA	n-R5s104	ENSMUST00000179107	rRNA		8	-1	123545696	119
ENSMUSG00000080409	miRNA	Mir467h	ENSMUST00000116759	miRNA		9	1	115381819	121
ENSMUSG00000106355	miRNA	n-TSaga9	ENSMUST00000197675	miRNA		4	1	10874064	107
ENSMUSG00000065575	miRNA	Mir449a	ENSMUST00000083641	miRNA		13	1	113037534	91
ENSMUSG00000077981	miRNA	Mir466f-3	ENSMUST00000104788	miRNA		2	1	10471953	94
ENSMUSG00000094608	miRNA	Gm25871	ENSMUST00000177816	miRNA		8	1	15413980	110
ENSMUSG00000065480	miRNA	Mir133b	ENSMUST00000083546	miRNA		1	1	20682769	119
ENSMUSG00000093780	miRNA	Gm22395	ENSMUST00000177427	miRNA		5	-1	64107502	96
ENSMUSG00000095636	snRNA	Gm22950	ENSMUST00000082776	snRNA		1	-1	171733405	107
ENSMUSG00000077675	snoRNA	Gm24469	ENSMUST00000104487	snoRNA		8	-1	18512645	131
ENSMUSG00000065634	snoRNA	Gm24252	ENSMUST00000083700	snoRNA		19	-1	25166216	132
ENSMUSG00000099001	misc_RNA	Gm27660	ENSMUST00000184028	misc_RNA		7	-1	91126555	208
ENSMUSG00000099125	miRNA	Gm27322	ENSMUST00000184007	miRNA		11	-1	106920761	104
ENSMUSG00000064814	snoRNA	Gm23939	ENSMUST00000082880	snoRNA		1	1	133601223	133
ENSMUSG00000095891	protein_coding	Gm10717	ENSMUST00000177875	protein_coding		9	1	3027523	675
ENSMUSG00000070081	miRNA	Mir505	ENSMUST00000093573	miRNA		X	-1	60394492	90
ENSMUSG00000099322	miRNA	Gm28017	ENSMUST00000183434	miRNA		4	-1	129762436	126
ENSMUSG00000092928	miRNA	Gm24563	ENSMUST00000175187	miRNA		6	1	48048703	93
ENSMUSG00000089185	snRNA	Gm22940	ENSMUST00000158560	snRNA		4	-1	11279419	155
ENSMUSG00000088232	snoRNA	Gm25429	ENSMUST00000157607	snoRNA		X	1	155139896	132
ENSMUSG00000105064	miRNA	Gm44345	ENSMUST00000199560	miRNA		17	1	91862602	135
ENSMUSG00000089162	snRNA	Gm24129	ENSMUST00000158537	snRNA		5	1	82803765	97
ENSMUSG00000064836	snoRNA	Gm25697	ENSMUST00000082902	snoRNA		14	-1	27527848	98
ENSMUSG00000089136	snRNA	Gm24922	ENSMUST00000158511	snRNA		12	-1	33000010	102
ENSMUSG00000095755	protein_coding	CR974586.3	ENSMUST00000178837	protein_coding		JH584293.1	-1	84475	909
ENSMUSG00000077726	snoRNA	Gm22900	ENSMUST00000104538	snoRNA		3	1	124501574	130
ENSMUSG00000106302	miRNA	Mir6902	ENSMUST00000198980	miRNA		1	1	93346092	64
ENSMUSG00000095891	protein_coding	Gm10717	ENSMUST00000179982	protein_coding		9	1	3027523	681
ENSMUSG00000092653	miRNA	Gm25243	ENSMUST00000174912	miRNA		12	-1	30558120	207
ENSMUSG00000105214	miRNA	Gm44373	ENSMUST00000196112	miRNA		15	-1	21947499	169
ENSMUSG00000087722	snoRNA	Gm26277	ENSMUST00000157097	snoRNA		5	1	110328032	152
ENSMUSG00000099330	miRNA	Mir7053	ENSMUST00000184044	miRNA		7	-1	44538178	73
ENSMUSG00000089132	rRNA	Gm24772	ENSMUST00000158507	rRNA		X	1	167902315	110
ENSMUSG00000077336	snoRNA	Gm23011	ENSMUST00000104148	snoRNA		3	-1	133588537	132
ENSMUSG00000098579	miRNA	Mir6937	ENSMUST00000184974	miRNA		12	1	28679325	65
ENSMUSG00000064631	rRNA	n-R5s42	ENSMUST00000082697	rRNA		15	1	87169113	104
ENSMUSG00000099284	miRNA	Mir7026	ENSMUST00000184384	miRNA		5	-1	110666141	67
ENSMUSG00000076240	miRNA	Mir702	ENSMUST00000102285	miRNA		5	1	136991433	109
ENSMUSG00000087903	snoRNA	Gm22039	ENSMUST00000157278	snoRNA		4	1	143204065	132
ENSMUSG00000098479	misc_RNA	Gm27263	ENSMUST00000184760	misc_RNA		14	-1	65206969	76
ENSMUSG00000089395	misc_RNA	Gm23024	ENSMUST00000158770	misc_RNA		1	1	32726639	292
ENSMUSG00000095584	snRNA	Gm22628	ENSMUST00000082988	snRNA		13	-1	16041152	107
ENSMUSG00000077645	snoRNA	Gm24983	ENSMUST00000104457	snoRNA		7	-1	59458883	69
ENSMUSG00000089265	snoRNA	Gm22888	ENSMUST00000158640	snoRNA		4	-1	41203133	77
ENSMUSG00000077369	snRNA	Gm23485	ENSMUST00000104181	snRNA		6	-1	71039733	155
ENSMUSG00000064522	snRNA	Gm26442	ENSMUST00000082588	snRNA		3	-1	66088261	153
ENSMUSG00000065565	miRNA	Mir181a-1	ENSMUST00000083631	miRNA		1	1	137966455	87
ENSMUSG00000064413	snRNA	Gm22245	ENSMUST00000082479	snRNA		2	1	132717106	103
ENSMUSG00000095891	protein_coding	Gm10717	ENSMUST00000099051	protein_coding	alternative2	9	1	3029195	639
ENSMUSG00000090408	protein_coding	Gm17402	ENSMUST00000166353	protein_coding	principal1	3	-1	67375163	228
ENSMUSG00000096132	rRNA	n-R5s119	ENSMUST00000178861	rRNA		8	-1	123571119	119
ENSMUSG00000077417	snoRNA	Gm23746	ENSMUST00000104229	snoRNA		4	1	48896499	125
ENSMUSG00000065053	snRNA	Gm25705	ENSMUST00000083119	snRNA		4	-1	31175012	104
ENSMUSG00000094109	snoRNA	Gm22776	ENSMUST00000178634	snoRNA		7	-1	59764181	94
ENSMUSG00000093036	miRNA	Mir5127	ENSMUST00000175295	miRNA		18	-1	81992080	71
ENSMUSG00000076252	miRNA	Mir302b	ENSMUST00000102297	miRNA		3	1	127545228	74
ENSMUSG00000073179	pseudogene	Gm10478	ENSMUST00000084451	pseudogene		12	-1	20896638	396
ENSMUSG00000088701	rRNA	Gm25553	ENSMUST00000158076	rRNA		X	1	21716017	79
ENSMUSG00000093116	miRNA	Gm22698	ENSMUST00000175375	miRNA		13	1	98560354	108
ENSMUSG00000095891	protein_coding	Gm10717	ENSMUST00000099042	protein_coding	principal5	9	1	3030337	669
ENSMUSG00000064432	snRNA	Gm25587	ENSMUST00000082498	snRNA		10	1	105040273	166
ENSMUSG00000099270	misc_RNA	Gm27454	ENSMUST00000185090	misc_RNA		6	1	52248332	204
ENSMUSG00000084718	rRNA	n-R5s187	ENSMUST00000122769	rRNA		4	1	81918513	111
ENSMUSG00000084752	snRNA	Gm22451	ENSMUST00000122803	snRNA		3	-1	72737981	151
ENSMUSG00000098703	miRNA	Gm27527	ENSMUST00000183903	miRNA		5	-1	106879698	99
ENSMUSG00000090718	pseudogene	Gm17376	ENSMUST00000166016	pseudogene		4	1	98745735	84
ENSMUSG00000095243	snRNA	Gm24754	ENSMUST00000177997	snRNA		16	-1	46018173	107
ENSMUSG00000077271	snoRNA	Gm22781	ENSMUST00000104083	snoRNA		4	-1	3796583	137
ENSMUSG00000104863	miRNA	Gm49347	ENSMUST00000199921	miRNA		18	1	35557132	111
ENSMUSG00000077543	snoRNA	Gm22022	ENSMUST00000104355	snoRNA		11	-1	34842354	127
ENSMUSG00000094404	protein_coding	Gm21776	ENSMUST00000177676	protein_coding	principal1	Y	1	76378662	1083
ENSMUSG00000064746	snRNA	Gm24707	ENSMUST00000082812	snRNA		11	1	15412300	107
ENSMUSG00000094381	miRNA	Gm25068	ENSMUST00000103895	miRNA		7	1	17618170	110
ENSMUSG00000093125	miRNA	Gm24365	ENSMUST00000175384	miRNA		7	-1	128478138	125
ENSMUSG00000088439	misc_RNA	Gm25386	ENSMUST00000157814	misc_RNA		7	1	44239748	288
ENSMUSG00000104997	miRNA	Gm44350	ENSMUST00000197197	miRNA		13	1	23683535	138
ENSMUSG00000092695	miRNA	Mir3092	ENSMUST00000174954	miRNA		3	-1	27584995	96
ENSMUSG00000099261	miRNA	Mir6984	ENSMUST00000185105	miRNA		19	1	3288920	64
ENSMUSG00000076219	miRNA	Mir487b	ENSMUST00000102265	miRNA		12	1	109727333	82
ENSMUSG00000099287	misc_RNA	Gm27987	ENSMUST00000184023	misc_RNA		X	1	103605225	93
ENSMUSG00000095891	protein_coding	Gm10717	ENSMUST00000179264	protein_coding		9	1	3030568	672
ENSMUSG00000093273	miRNA	Mir3064	ENSMUST00000175532	miRNA		11	-1	106782759	67
ENSMUSG00000098665	misc_RNA	Gm27587	ENSMUST00000185116	misc_RNA		16	-1	41299896	163
ENSMUSG00000093106	miRNA	Gm25534	ENSMUST00000175365	miRNA		13	-1	93923311	125
ENSMUSG00000080631	miRNA	Gm25507	ENSMUST00000116981	miRNA		11	-1	24679711	144
ENSMUSG00000076117	miRNA	Mir680-2	ENSMUST00000102163	miRNA		X	1	144297790	110
ENSMUSG00000094303	protein_coding	AC165294.1	ENSMUST00000110576	protein_coding		JH584297.1	-1	22248	1218
ENSMUSG00000065836	snRNA	Gm23502	ENSMUST00000083902	snRNA		14	1	21812711	145
ENSMUSG00000095330	protein_coding	Gm21834	ENSMUST00000178907	protein_coding	principal1	17	-1	57742219	453
ENSMUSG00000065402	miRNA	Mir122	ENSMUST00000083468	miRNA		18	1	65248861	66
ENSMUSG00000088043	snoRNA	Gm23328	ENSMUST00000157418	snoRNA		2	1	67420031	132
ENSMUSG00000095747	miRNA	Gm22475	ENSMUST00000175169	miRNA		17	1	5421464	102
ENSMUSG00000093113	miRNA	Gm22702	ENSMUST00000175372	miRNA		11	-1	92024413	69
ENSMUSG00000089224	misc_RNA	Gm22075	ENSMUST00000158599	misc_RNA		11	-1	72800478	192
ENSMUSG00000098745	miRNA	Gm27825	ENSMUST00000184586	miRNA		15	1	82504596	60
ENSMUSG00000077782	snoRNA	Gm24160	ENSMUST00000104594	snoRNA		1	-1	79513864	126
ENSMUSG00000095505	protein_coding	AC164084.1	ENSMUST00000178335	protein_coding		JH584296.1	-1	197903	837
ENSMUSG00000094514	protein_coding	AC133103.3	ENSMUST00000178645	protein_coding		GL456211.1	-1	229375	366
ENSMUSG00000084544	misc_RNA	Gm23183	ENSMUST00000122595	misc_RNA		5	-1	66326062	323
ENSMUSG00000095891	protein_coding	Gm10717	ENSMUST00000179839	protein_coding		9	1	3032085	681
ENSMUSG00000089286	snRNA	Gm24277	ENSMUST00000158661	snRNA		4	1	57762607	104
ENSMUSG00000088273	snoRNA	Gm23123	ENSMUST00000157648	snoRNA		17	1	26223502	144
ENSMUSG00000099126	misc_RNA	Gm27321	ENSMUST00000185021	misc_RNA		X	1	103623551	205
ENSMUSG00000079433	protein_coding	Gm11114	ENSMUST00000113205	protein_coding	principal1	9	1	85312773	57
ENSMUSG00000098396	misc_RNA	Gm27997	ENSMUST00000184942	misc_RNA		5	1	100426736	69
ENSMUSG00000065629	snoRNA	Gm24826	ENSMUST00000083695	snoRNA		1	1	39519533	215
ENSMUSG00000094154	snoRNA	Gm23266	ENSMUST00000104444	snoRNA		11	-1	71233940	134
ENSMUSG00000065602	miRNA	Mirlet7f-2	ENSMUST00000083668	miRNA		X	1	151912346	83
ENSMUSG00000095891	protein_coding	Gm10717	ENSMUST00000099056	protein_coding		9	1	3032085	669
ENSMUSG00000088649	snoRNA	Gm26262	ENSMUST00000158024	snoRNA		18	1	45941007	127
ENSMUSG00000093149	miRNA	Gm23374	ENSMUST00000175408	miRNA		16	-1	64918305	84
ENSMUSG00000064818	snRNA	Gm22359	ENSMUST00000082884	snRNA		X	1	154711258	108
ENSMUSG00000094384	snoRNA	Gm25065	ENSMUST00000177914	snoRNA		6	1	123623932	132
ENSMUSG00000073290	protein_coding	Gm10490	ENSMUST00000086274	protein_coding	principal1	X	1	7909542	360
ENSMUSG00000089294	miRNA	Mir2139	ENSMUST00000158669	miRNA		4	-1	139967620	95
ENSMUSG00000096076	miRNA	Gm23962	ENSMUST00000180079	miRNA		7	-1	61681594	80
ENSMUSG00000089552	snoRNA	Gm24177	ENSMUST00000158927	snoRNA		4	1	54004057	131
ENSMUSG00000064428	snRNA	Gm22746	ENSMUST00000082494	snRNA		X	-1	163150497	107
ENSMUSG00000094717	snRNA	Gm22821	ENSMUST00000179288	snRNA		9	-1	109295648	107
ENSMUSG00000095523	protein_coding	AC124606.1	ENSMUST00000180303	protein_coding		JH584299.1	1	837364	1446
ENSMUSG00000106563	miRNA	Mir6962	ENSMUST00000199512	miRNA		15	1	101193869	63
ENSMUSG00000088076	snRNA	Gm22815	ENSMUST00000157451	snRNA		9	1	9301391	62
ENSMUSG00000098603	misc_RNA	Gm27798	ENSMUST00000184989	misc_RNA		X	1	103595938	71
ENSMUSG00000078604	protein_coding	Gm10961	ENSMUST00000106703	protein_coding	principal1	3	1	107631322	144
ENSMUSG00000095580	snRNA	Rnu1b1	ENSMUST00000178250	snRNA		3	-1	96360117	165
ENSMUSG00000099012	rRNA	Gm27355	ENSMUST00000185045	rRNA		8	-1	76619282	128
ENSMUSG00000098513	miRNA	Mir6399	ENSMUST00000184050	miRNA		4	1	138163209	84
ENSMUSG00000074210	protein_coding	E130208F15Rik	ENSMUST00000098585	protein_coding	principal1	7	1	30321740	1733
ENSMUSG00000106581	miRNA	Mir7042	ENSMUST00000200187	miRNA		6	1	113707208	58
ENSMUSG00000093262	miRNA	Gm23413	ENSMUST00000175521	miRNA		16	-1	4057497	125
ENSMUSG00000089050	snoRNA	Gm23353	ENSMUST00000158425	snoRNA		10	1	27452289	72
ENSMUSG00000088978	rRNA	Gm23757	ENSMUST00000158353	rRNA		10	1	26357947	100
ENSMUSG00000089170	misc_RNA	Gm22431	ENSMUST00000158545	misc_RNA		14	1	56535971	107
ENSMUSG00000065219	snoRNA	Snord32a	ENSMUST00000083285	snoRNA		7	-1	45127464	83
ENSMUSG00000077772	snoRNA	Gm22373	ENSMUST00000104584	snoRNA		7	-1	59923122	89
ENSMUSG00000066809	processed_pseudogene	Gm10180	ENSMUST00000086236	processed_pseudogene		9	-1	25101481	78
ENSMUSG00000096811	snoRNA	Gm25088	ENSMUST00000101803	snoRNA		7	-1	59453061	79
ENSMUSG00000105788	miRNA	Gm47295	ENSMUST00000200493	miRNA		12	1	69159518	79
ENSMUSG00000077980	miRNA	Mir654	ENSMUST00000104787	miRNA		12	1	109723218	84
ENSMUSG00000104627	miRNA	Mir3535	ENSMUST00000197651	miRNA		1	-1	86352127	147
ENSMUSG00000058360	pseudogene	Gm10040	ENSMUST00000080726	pseudogene		3	1	68733137	1662
ENSMUSG00000089487	snRNA	Gm24736	ENSMUST00000158862	snRNA		17	-1	72499418	130
ENSMUSG00000098353	miRNA	Mir7057	ENSMUST00000184685	miRNA		7	-1	66381724	58
ENSMUSG00000077627	snoRNA	Gm23835	ENSMUST00000104439	snoRNA		15	-1	60704123	132
ENSMUSG00000065298	snRNA	Gm26121	ENSMUST00000083364	snRNA		11	1	72881792	162
ENSMUSG00000087987	snRNA	Gm22221	ENSMUST00000157362	snRNA		4	-1	127284833	103
ENSMUSG00000095119	snoRNA	Gm23711	ENSMUST00000083856	snoRNA		4	1	130775741	83
ENSMUSG00000098848	misc_RNA	Gm27893	ENSMUST00000184408	misc_RNA		6	1	83710739	194
ENSMUSG00000098962	misc_RNA	Gm27698	ENSMUST00000184060	misc_RNA		13	1	56699930	249
ENSMUSG00000088712	scaRNA	Gm22728	ENSMUST00000158087	scaRNA		5	-1	92056192	129
ENSMUSG00000088767	misc_RNA	Gm22636	ENSMUST00000158142	misc_RNA		X	1	127408430	275
ENSMUSG00000095742	protein_coding	CAAA01147332.1	ENSMUST00000179436	protein_coding		JH584295.1	-1	1479	243
ENSMUSG00000094229	snRNA	Gm22969	ENSMUST00000179018	snRNA		7	1	46450413	107
ENSMUSG00000080536	snoRNA	Gm25539	ENSMUST00000116886	snoRNA		6	1	148967316	122
ENSMUSG00000098258	miRNA	Mir6369	ENSMUST00000183772	miRNA		13	-1	58313149	106
ENSMUSG00000089270	snoRNA	Gm24551	ENSMUST00000158645	snoRNA		2	-1	149566285	92
ENSMUSG00000098867	miRNA	Gm27463	ENSMUST00000183569	miRNA		15	-1	82642001	57
ENSMUSG00000088512	snoRNA	Gm24467	ENSMUST00000157887	snoRNA		2	1	40298517	126
ENSMUSG00000095772	snoRNA	Gm23017	ENSMUST00000177583	snoRNA		9	-1	88598419	72
ENSMUSG00000092918	miRNA	Gm24081	ENSMUST00000175177	miRNA		2	1	127040561	125
ENSMUSG00000088398	snoRNA	Gm26306	ENSMUST00000157773	snoRNA		9	-1	44395915	119
ENSMUSG00000064834	snRNA	Gm25696	ENSMUST00000082900	snRNA		3	1	35735373	105
ENSMUSG00000106328	miRNA	Mir7118	ENSMUST00000197760	miRNA		15	-1	89162908	61
ENSMUSG00000077270	snoRNA	Gm22782	ENSMUST00000104082	snoRNA		12	1	65566090	132
ENSMUSG00000077445	snoRNA	Gm23128	ENSMUST00000104257	snoRNA		8	-1	38983035	132
ENSMUSG00000084445	snoRNA	Gm26252	ENSMUST00000122496	snoRNA		5	1	99870248	76
ENSMUSG00000064971	snRNA	Gm26054	ENSMUST00000083037	snRNA		7	-1	116952695	107
ENSMUSG00000098662	misc_RNA	Gm27582	ENSMUST00000184084	misc_RNA		10	-1	92133347	126
ENSMUSG00000079773	protein_coding	AC087559.2	ENSMUST00000115907	protein_coding		GL456350.1	-1	174286	412
ENSMUSG00000088021	snRNA	Gm22145	ENSMUST00000157396	snRNA		9	1	67104208	148
ENSMUSG00000075006	protein_coding	Gm10799	ENSMUST00000099666	protein_coding	principal1	2	-1	104068550	312
ENSMUSG00000084640	misc_RNA	Gm24383	ENSMUST00000122691	misc_RNA		3	-1	107416195	333
ENSMUSG00000093064	misc_RNA	Gm23153	ENSMUST00000175323	misc_RNA		1	-1	190483157	313
ENSMUSG00000077799	snoRNA	Gm25148	ENSMUST00000104611	snoRNA		13	1	56167600	123
ENSMUSG00000077941	miRNA	Mir466h	ENSMUST00000104748	miRNA		2	1	10514891	81
ENSMUSG00000088616	snRNA	Gm26000	ENSMUST00000157991	snRNA		X	1	98814775	107
ENSMUSG00000087891	misc_RNA	Gm25277	ENSMUST00000157266	misc_RNA		10	-1	42493746	324
ENSMUSG00000084650	misc_RNA	Gm22718	ENSMUST00000122701	misc_RNA		6	1	19046837	315
ENSMUSG00000065397	miRNA	Mir155	ENSMUST00000083463	miRNA		16	1	84714140	65
ENSMUSG00000067085	protein_coding	Gm10197	ENSMUST00000086887	protein_coding	principal1	19	-1	53371766	201
ENSMUSG00000076335	miRNA	Mir670	ENSMUST00000102380	miRNA		2	-1	94261399	100
ENSMUSG00000077996	miRNA	Mir190b	ENSMUST00000104803	miRNA		3	1	90070020	80
ENSMUSG00000065594	miRNA	Mir107	ENSMUST00000083660	miRNA		19	-1	34820773	87
ENSMUSG00000088338	misc_RNA	Gm22849	ENSMUST00000157713	misc_RNA		4	1	34683879	307
ENSMUSG00000087859	snRNA	Gm22796	ENSMUST00000157234	snRNA		1	-1	135353822	106
ENSMUSG00000104953	miRNA	Gm47308	ENSMUST00000197528	miRNA		9	-1	64726730	107
ENSMUSG00000065758	rRNA	n-R5s10	ENSMUST00000083824	rRNA		X	-1	86406246	119
ENSMUSG00000068181	protein_coding	Gm10234	ENSMUST00000089304	protein_coding	principal1	6	1	95322112	60
ENSMUSG00000088591	rRNA	Gm23964	ENSMUST00000157966	rRNA		17	1	94764825	107
ENSMUSG00000098361	miRNA	Mir7086	ENSMUST00000183683	miRNA		9	-1	45266707	65
ENSMUSG00000079800	protein_coding	AC125149.3	ENSMUST00000096862	protein_coding		GL456210.1	-1	58882	1271
ENSMUSG00000099160	miRNA	Mir6415	ENSMUST00000184064	miRNA		5	1	92458557	100
ENSMUSG00000077350	rRNA	n-R5s31	ENSMUST00000104162	rRNA		16	-1	16011009	110
ENSMUSG00000065593	miRNA	Mir339	ENSMUST00000083659	miRNA		5	-1	139369745	96
ENSMUSG00000098817	miRNA	Mir6409	ENSMUST00000184957	miRNA		10	1	76008926	92
ENSMUSG00000094247	miRNA	Gm23968	ENSMUST00000175047	miRNA		2	1	160624468	125
ENSMUSG00000071586	protein_coding	Gm10337	ENSMUST00000096145	protein_coding	principal1	15	1	102503722	165
ENSMUSG00000064685	snRNA	Gm25812	ENSMUST00000082751	snRNA		X	1	22434414	103
ENSMUSG00000095631	rRNA	n-R5s86	ENSMUST00000083215	rRNA		9	1	74059339	119
ENSMUSG00000095998	snRNA	Gm24701	ENSMUST00000101946	snRNA		7	1	14912358	105
ENSMUSG00000095122	miRNA	Gm23215	ENSMUST00000178153	miRNA		16	1	3249584	121
ENSMUSG00000080394	snoRNA	Gm23786	ENSMUST00000116744	snoRNA		X	1	162748554	121
ENSMUSG00000088901	miRNA	Mir1943	ENSMUST00000158276	miRNA		15	-1	79375300	73
ENSMUSG00000065297	snoRNA	Gm26123	ENSMUST00000083363	snoRNA		8	1	65902057	135
ENSMUSG00000090592	protein_coding	Gm17571	ENSMUST00000167906	protein_coding	principal1	9	-1	13446753	90
ENSMUSG00000088822	snRNA	Gm25225	ENSMUST00000158197	snRNA		12	-1	78752788	102
ENSMUSG00000105211	miRNA	Gm47302	ENSMUST00000198698	miRNA		1	1	45311673	141
ENSMUSG00000064595	snoRNA	Gm22300	ENSMUST00000082661	snoRNA		4	1	56913642	126
ENSMUSG00000065542	miRNA	Mir224	ENSMUST00000083608	miRNA		X	-1	72261112	82
ENSMUSG00000064928	snRNA	Gm22045	ENSMUST00000082994	snRNA		15	1	96671793	108
ENSMUSG00000104896	snoRNA	Rnu3b4	ENSMUST00000199460	snoRNA		11	1	87462286	216
ENSMUSG00000095616	snRNA	Gm26244	ENSMUST00000083435	snRNA		18	-1	10151140	164
ENSMUSG00000038555	protein_coding	Reep2	ENSMUST00000043484	protein_coding	principal1	18	1	34840589	1926
ENSMUSG00000096170	rRNA	n-R5s146	ENSMUST00000177889	rRNA		8	-1	123616928	119
ENSMUSG00000080574	miRNA	Mir466i	ENSMUST00000116924	miRNA		13	1	17747473	121
ENSMUSG00000098459	misc_RNA	Gm27308	ENSMUST00000184807	misc_RNA		2	-1	105125454	233
ENSMUSG00000064679	snoRNA	Gm25357	ENSMUST00000082745	snoRNA		12	1	109657125	72
ENSMUSG00000096923	protein_coding	A730071L15Rik	ENSMUST00000181545	protein_coding	principal1	11	1	6200029	1615
ENSMUSG00000076294	miRNA	Gm26154	ENSMUST00000102339	miRNA		4	1	98661637	96
ENSMUSG00000064653	snRNA	Gm26129	ENSMUST00000082719	snRNA		13	1	14087439	107
ENSMUSG00000105468	miRNA	Mir6906	ENSMUST00000198998	miRNA		10	1	60126776	58
ENSMUSG00000089408	ribozyme	Gm24885	ENSMUST00000158783	ribozyme		2	-1	107097475	270
ENSMUSG00000088803	misc_RNA	Gm24074	ENSMUST00000158178	misc_RNA		15	1	11965330	260
ENSMUSG00000093344	miRNA	Gm26113	ENSMUST00000175603	miRNA		5	1	141080431	79
ENSMUSG00000084574	rRNA	n-R5s198	ENSMUST00000122625	rRNA		2	-1	74935514	100
ENSMUSG00000076142	miRNA	Mir711	ENSMUST00000102188	miRNA		9	1	108969922	82
ENSMUSG00000092638	miRNA	Mir5112	ENSMUST00000174897	miRNA		18	1	82720281	60
ENSMUSG00000077562	snRNA	Gm23203	ENSMUST00000104374	snRNA		17	-1	59569665	107
ENSMUSG00000065450	miRNA	Mir448	ENSMUST00000083516	miRNA		X	1	147158210	112
ENSMUSG00000080380	miRNA	Gm22102	ENSMUST00000116730	miRNA		X	1	106697078	121
ENSMUSG00000089129	misc_RNA	Gm26407	ENSMUST00000158504	misc_RNA		18	1	12961499	307
ENSMUSG00000105790	miRNA	Gm24105	ENSMUST00000196719	miRNA		5	-1	149248027	78
ENSMUSG00000096030	snRNA	Gm24424	ENSMUST00000179714	snRNA		14	-1	54450064	107
ENSMUSG00000099208	misc_RNA	Gm27940	ENSMUST00000184449	misc_RNA		1	-1	195241007	98
ENSMUSG00000088185	scaRNA	Scarna2	ENSMUST00000157560	scaRNA		3	-1	108554751	414
ENSMUSG00000080517	snRNA	Gm23109	ENSMUST00000116867	snRNA		11	1	29334934	126
ENSMUSG00000064672	snoRNA	Gm22806	ENSMUST00000082738	snoRNA		13	1	51648199	136
ENSMUSG00000098938	miRNA	Mir6393	ENSMUST00000183709	miRNA		15	-1	87795943	94
ENSMUSG00000080562	miRNA	Gm26043	ENSMUST00000116912	miRNA		13	-1	5821858	91
ENSMUSG00000095685	miRNA	Gm23283	ENSMUST00000179362	miRNA		18	-1	31390103	110
ENSMUSG00000080590	miRNA	Gm22029	ENSMUST00000116940	miRNA		3	-1	55162434	121
ENSMUSG00000105924	miRNA	Gm44359	ENSMUST00000200671	miRNA		13	-1	23574853	138
ENSMUSG00000094507	protein_coding	Gm21913	ENSMUST00000179880	protein_coding	principal1	Y	1	74623896	1083
ENSMUSG00000094968	miRNA	Gm22419	ENSMUST00000178780	miRNA		1	-1	47749399	121
ENSMUSG00000106489	scaRNA	Gm23370	ENSMUST00000197008	scaRNA		1	1	127331813	129
ENSMUSG00000089418	misc_RNA	Gm22016	ENSMUST00000158793	misc_RNA		1	1	141314355	114
ENSMUSG00000094481	snoRNA	Gm23267	ENSMUST00000178490	snoRNA		15	1	52499656	132
ENSMUSG00000098483	miRNA	Mir7078	ENSMUST00000183794	miRNA		8	1	117459265	64
ENSMUSG00000088870	snoRNA	Gm25866	ENSMUST00000158245	snoRNA		2	1	148624711	112
ENSMUSG00000087772	snoRNA	Gm22319	ENSMUST00000157147	snoRNA		14	-1	68167074	122
ENSMUSG00000078590	protein_coding	Gm10959	ENSMUST00000106431	protein_coding	principal1	3	-1	122919360	72
ENSMUSG00000065428	miRNA	Mir382	ENSMUST00000083494	miRNA		12	1	109733771	76
ENSMUSG00000098718	miRNA	Mir496b	ENSMUST00000184935	miRNA		19	-1	16315004	113
ENSMUSG00000088715	snoRNA	Gm22727	ENSMUST00000158090	snoRNA		1	1	137734318	116
ENSMUSG00000093999	snRNA	Gm26501	ENSMUST00000178307	snRNA		6	-1	95100307	107
ENSMUSG00000077161	snoRNA	Gm24117	ENSMUST00000103973	snoRNA		4	1	62812428	133
ENSMUSG00000093138	miRNA	Gm25998	ENSMUST00000175397	miRNA		2	-1	33363046	53
ENSMUSG00000077418	snoRNA	Gm23745	ENSMUST00000104230	snoRNA		4	1	53905696	125
ENSMUSG00000098974	misc_RNA	Gm27505	ENSMUST00000185071	misc_RNA		19	-1	5844747	110
ENSMUSG00000095129	snRNA	Gm23217	ENSMUST00000178482	snRNA		15	-1	72255456	107
ENSMUSG00000088559	miRNA	Mir1981	ENSMUST00000157934	miRNA		1	-1	184822488	82
ENSMUSG00000095699	miRNA	Gm26092	ENSMUST00000179798	miRNA		2	1	10512203	97
ENSMUSG00000088258	snRNA	Gm24291	ENSMUST00000157633	snRNA		8	-1	113528671	162
ENSMUSG00000092835	snRNA	Gm24819	ENSMUST00000175094	snRNA		13	-1	41578074	166
ENSMUSG00000098297	miRNA	Mir6980	ENSMUST00000185063	miRNA		18	-1	37990945	59
ENSMUSG00000093083	miRNA	Gm24323	ENSMUST00000175342	miRNA		11	1	117085836	77
ENSMUSG00000088839	snRNA	Gm27510	ENSMUST00000158214	snRNA		X	1	101005896	64
ENSMUSG00000095434	miRNA	CAAA01205117.2	ENSMUST00000178705	miRNA		GL456385.1	1	31243	101
ENSMUSG00000093079	miRNA	Gm25953	ENSMUST00000175338	miRNA		6	1	118429170	83
ENSMUSG00000096349	snRNA	Gm22513	ENSMUST00000179621	snRNA		12	1	54696782	164
ENSMUSG00000094598	miRNA	Gm24694	ENSMUST00000180054	miRNA		3	1	16013818	110
ENSMUSG00000089455	snoRNA	Gm24229	ENSMUST00000158830	snoRNA		14	1	108622543	118
ENSMUSG00000098331	miRNA	Mir7069	ENSMUST00000184765	miRNA		8	1	84867947	62
ENSMUSG00000095311	snRNA	Gm25464	ENSMUST00000175481	snRNA		14	-1	122388160	107
ENSMUSG00000076039	miRNA	Gm22137	ENSMUST00000102085	miRNA		16	-1	8623270	108
ENSMUSG00000025226	protein_coding	Fbxl15	ENSMUST00000026256	protein_coding	principal1	19	1	46328184	1348
ENSMUSG00000091604	protein_coding	Gm17349	ENSMUST00000163472	protein_coding	principal1	15	-1	99705490	300
ENSMUSG00000095842	miRNA	Gm24302	ENSMUST00000178350	miRNA		15	1	12695124	101
ENSMUSG00000098267	miRNA	Mir7060	ENSMUST00000183486	miRNA		7	1	127489251	137
ENSMUSG00000096713	snRNA	Gm23148	ENSMUST00000180367	snRNA		4	1	62264314	107
ENSMUSG00000075864	snRNA	Gm26002	ENSMUST00000101915	snRNA		8	1	128650997	107
ENSMUSG00000065515	miRNA	Mir152	ENSMUST00000083581	miRNA		11	1	96850393	73
ENSMUSG00000087844	miRNA	Mir1958	ENSMUST00000157219	miRNA		4	-1	48213215	97
ENSMUSG00000088913	snRNA	Gm22611	ENSMUST00000158288	snRNA		11	1	76974086	150
ENSMUSG00000088329	ribozyme	Gm25661	ENSMUST00000157704	ribozyme		8	1	69399725	296
ENSMUSG00000098251	miRNA	Mir7656	ENSMUST00000183864	miRNA		9	1	94751829	62
ENSMUSG00000098473	miRNA	Mir7083	ENSMUST00000184374	miRNA		9	-1	21810000	60
ENSMUSG00000092840	miRNA	Gm24331	ENSMUST00000175099	miRNA		13	1	84182278	67
ENSMUSG00000088083	misc_RNA	Gm25339	ENSMUST00000157458	misc_RNA		16	1	47758440	232
ENSMUSG00000104582	miRNA	Mir380	ENSMUST00000199984	miRNA		12	1	109711803	61
ENSMUSG00000098722	miRNA	Gm27331	ENSMUST00000183705	miRNA		15	-1	82407153	60
ENSMUSG00000095604	miRNA	Gm23424	ENSMUST00000103889	miRNA		18	1	36810891	110
ENSMUSG00000088465	snoRNA	Gm24745	ENSMUST00000157840	snoRNA		10	1	107136974	85
ENSMUSG00000099289	miRNA	Mir6403	ENSMUST00000185007	miRNA		4	-1	134567851	129
ENSMUSG00000095006	miRNA	Mir465c-2	ENSMUST00000104757	miRNA		X	-1	66832597	81
ENSMUSG00000088643	snRNA	Gm26484	ENSMUST00000158018	snRNA		6	-1	29487822	106
ENSMUSG00000088245	snoRNA	Gm25910	ENSMUST00000157620	snoRNA		6	-1	67897204	140
ENSMUSG00000095776	miRNA	Gm23018	ENSMUST00000177928	miRNA		12	-1	69561337	109
ENSMUSG00000084531	misc_RNA	Gm25843	ENSMUST00000122582	misc_RNA		1	1	50559762	314
ENSMUSG00000087879	ribozyme	Gm26106	ENSMUST00000157254	ribozyme		18	-1	26928329	228
ENSMUSG00000089168	snRNA	Gm24128	ENSMUST00000158543	snRNA		15	1	102456563	99
ENSMUSG00000095938	miRNA	Gm25701	ENSMUST00000179988	miRNA		2	1	10477710	127
ENSMUSG00000104996	miRNA	Mir6924	ENSMUST00000198919	miRNA		11	-1	69882094	63
ENSMUSG00000089116	snoRNA	Gm25904	ENSMUST00000158491	snoRNA		9	-1	104481510	143
ENSMUSG00000025226	protein_coding	Fbxl15	ENSMUST00000177667	protein_coding	principal1	19	1	46328187	1243
ENSMUSG00000092004	protein_coding	Gm17482	ENSMUST00000166681	protein_coding	principal1	6	1	115227343	48
ENSMUSG00000098871	miRNA	Mir6381	ENSMUST00000183426	miRNA		3	-1	142623946	87
ENSMUSG00000098663	miRNA	Mir6958	ENSMUST00000184207	miRNA		15	-1	89185537	73
ENSMUSG00000088198	snoRNA	Gm23906	ENSMUST00000157573	snoRNA		10	1	51888625	128
ENSMUSG00000088230	misc_RNA	Gm25427	ENSMUST00000157605	misc_RNA		11	1	86333206	103
ENSMUSG00000089277	snRNA	Gm24546	ENSMUST00000158652	snRNA		9	1	18679128	102
ENSMUSG00000095985	rRNA	Gm23052	ENSMUST00000178633	rRNA		Y	-1	54929104	108
ENSMUSG00000077287	snoRNA	Gm25763	ENSMUST00000104099	snoRNA		8	-1	18614109	129
ENSMUSG00000088435	snoRNA	Gm25383	ENSMUST00000157810	snoRNA		13	1	79161719	144
ENSMUSG00000088103	snoRNA	Gm23993	ENSMUST00000157478	snoRNA		5	1	8242723	144
ENSMUSG00000096604	snoRNA	Gm26201	ENSMUST00000178047	snoRNA		7	-1	59802049	94
ENSMUSG00000077567	snoRNA	Gm23200	ENSMUST00000104379	snoRNA		15	-1	53613198	132
ENSMUSG00000088332	snRNA	Gm22847	ENSMUST00000157707	snRNA		5	1	34530649	105
ENSMUSG00000098890	miRNA	Mir7008	ENSMUST00000184398	miRNA		3	1	31038966	63
ENSMUSG00000094603	miRNA	Gm25872	ENSMUST00000177784	miRNA		17	1	7704840	100
ENSMUSG00000099278	miRNA	CR524822.1	ENSMUST00000183641	miRNA		GL456239.1	1	38438	98
ENSMUSG00000099314	miRNA	Gm27734	ENSMUST00000183701	miRNA		16	1	13819232	89
ENSMUSG00000094458	snoRNA	Gm22627	ENSMUST00000178127	snoRNA		7	-1	59533464	79
ENSMUSG00000088525	snoRNA	Gm26085	ENSMUST00000157900	snoRNA		19	1	47710866	116
ENSMUSG00000092685	miRNA	Gm26241	ENSMUST00000174944	miRNA		8	-1	44548074	101
ENSMUSG00000065794	snRNA	Gm25514	ENSMUST00000083860	snRNA		2	-1	116968173	135
ENSMUSG00000092641	misc_RNA	Gm23563	ENSMUST00000174900	misc_RNA		11	-1	102458974	251
ENSMUSG00000095894	miRNA	Gm24795	ENSMUST00000116737	miRNA		16	1	39455015	121
ENSMUSG00000095539	miRNA	Gm25287	ENSMUST00000103846	miRNA		10	1	100144254	110
ENSMUSG00000089539	snRNA	Gm25160	ENSMUST00000158914	snRNA		8	1	97222534	102
ENSMUSG00000084568	misc_RNA	Gm26480	ENSMUST00000122619	misc_RNA		12	-1	96256237	297
ENSMUSG00000092876	miRNA	Gm25641	ENSMUST00000175135	miRNA		3	-1	88215696	108
ENSMUSG00000064433	misc_RNA	Gm25586	ENSMUST00000082499	misc_RNA		1	-1	29281075	112
ENSMUSG00000089178	snoRNA	Gm22429	ENSMUST00000158553	snoRNA		16	-1	65170170	130
ENSMUSG00000089493	snRNA	Gm26361	ENSMUST00000158868	snRNA		3	-1	95796884	186
ENSMUSG00000096736	protein_coding	Gm17535	ENSMUST00000178641	protein_coding	principal1	9	1	3034599	672
ENSMUSG00000095511	snoRNA	Gm24137	ENSMUST00000180055	snoRNA		7	-1	59610211	79
ENSMUSG00000089130	snoRNA	Gm24770	ENSMUST00000158505	snoRNA		14	1	96945019	92
ENSMUSG00000089480	misc_RNA	Gm24739	ENSMUST00000158855	misc_RNA		2	-1	126269363	292
ENSMUSG00000092710	snoRNA	Gm22857	ENSMUST00000174969	snoRNA		8	1	47440418	134
ENSMUSG00000065090	snRNA	Gm23677	ENSMUST00000083156	snRNA		8	-1	115591273	104
ENSMUSG00000092812	miRNA	Gm23634	ENSMUST00000175071	miRNA		4	1	134468364	91
ENSMUSG00000089269	snRNA	Gm26468	ENSMUST00000158644	snRNA		3	-1	149341008	106
ENSMUSG00000065853	snoRNA	Gm22354	ENSMUST00000083919	snoRNA		14	1	52069300	70
ENSMUSG00000089387	snoRNA	Gm24679	ENSMUST00000158762	snoRNA		18	-1	66550045	111
ENSMUSG00000088062	rRNA	Gm24476	ENSMUST00000157437	rRNA		15	-1	33589736	131
ENSMUSG00000065698	snoRNA	Gm25409	ENSMUST00000083764	snoRNA		7	-1	99653818	131
ENSMUSG00000064867	snRNA	Gm25039	ENSMUST00000082933	snRNA		3	1	86384247	107
ENSMUSG00000096392	snoRNA	Gm23688	ENSMUST00000178502	snoRNA		7	-1	59570913	79
ENSMUSG00000087880	snoRNA	Gm23605	ENSMUST00000157255	snoRNA		5	-1	68566296	127
ENSMUSG00000065270	snRNA	Gm25127	ENSMUST00000083336	snRNA		3	1	149028932	107
ENSMUSG00000098368	rRNA	Gm27648	ENSMUST00000184315	rRNA		1	1	90327312	107
ENSMUSG00000092760	miRNA	Gm23365	ENSMUST00000175019	miRNA		6	-1	113528674	125
ENSMUSG00000094523	miRNA	Gm22913	ENSMUST00000175297	miRNA		10	1	96164331	101
ENSMUSG00000076327	miRNA	Gm26338	ENSMUST00000102372	miRNA		6	-1	128095026	110
ENSMUSG00000067929	protein_coding	Gm10226	ENSMUST00000072133	protein_coding	principal1	17	1	21691860	255
ENSMUSG00000076231	miRNA	Gm22759	ENSMUST00000102276	miRNA		2	1	156322552	96
ENSMUSG00000088510	snoRNA	Gm23036	ENSMUST00000157885	snoRNA		1	-1	102414021	99
ENSMUSG00000096313	snoRNA	Snord116l7	ENSMUST00000179895	snoRNA		7	-1	59882082	94
ENSMUSG00000093495	miRNA	Gm23368	ENSMUST00000116939	miRNA		7	-1	30100935	96
ENSMUSG00000098976	miRNA	Mir6769b	ENSMUST00000184793	miRNA		8	-1	71631106	60
ENSMUSG00000088858	snoRNA	Gm24723	ENSMUST00000158233	snoRNA		1	-1	20842666	132
ENSMUSG00000064658	snoRNA	Gm24166	ENSMUST00000082724	snoRNA		9	-1	44736947	135
ENSMUSG00000099151	misc_RNA	Gm27803	ENSMUST00000183763	misc_RNA		7	1	143273566	119
ENSMUSG00000098460	miRNA	Mir6970	ENSMUST00000184474	miRNA		17	-1	34845167	67
ENSMUSG00000092961	miRNA	Gm22239	ENSMUST00000175220	miRNA		2	1	10510461	103
ENSMUSG00000084575	snRNA	Gm23656	ENSMUST00000122626	snRNA		X	1	105873824	112
ENSMUSG00000092661	miRNA	Gm22402	ENSMUST00000174920	miRNA		4	-1	82061221	110
ENSMUSG00000099320	miRNA	Mir7664	ENSMUST00000184681	miRNA		2	1	25059811	63
ENSMUSG00000096812	snoRNA	Gm25087	ENSMUST00000101992	snoRNA		7	-1	59582140	78
ENSMUSG00000098365	miRNA	Gm27647	ENSMUST00000184709	miRNA		14	1	67074830	118
ENSMUSG00000094751	rRNA	Gm25018	ENSMUST00000179081	rRNA		8	-1	123566087	119
ENSMUSG00000088629	misc_RNA	Gm23030	ENSMUST00000158004	misc_RNA		8	1	46107259	273
ENSMUSG00000088677	snoRNA	Gm22804	ENSMUST00000158052	snoRNA		4	1	94487883	101
ENSMUSG00000089489	snRNA	Gm24732	ENSMUST00000158864	snRNA		1	-1	32568421	63
ENSMUSG00000088793	snRNA	Gm22540	ENSMUST00000158168	snRNA		9	-1	44476532	117
ENSMUSG00000106488	miRNA	Mir669a-11	ENSMUST00000197952	miRNA		2	1	10501339	87
ENSMUSG00000099264	miRNA	Mir6411	ENSMUST00000183556	miRNA		10	1	104287269	108
ENSMUSG00000065540	miRNA	Mir126a	ENSMUST00000083606	miRNA		2	1	26591357	73
ENSMUSG00000105799	miRNA	Mir126b	ENSMUST00000199077	miRNA		2	-1	26591420	58
ENSMUSG00000076951	miRNA	Gm24932	ENSMUST00000103763	miRNA		7	-1	107319763	110
ENSMUSG00000064403	snRNA	Gm23928	ENSMUST00000082469	snRNA		7	-1	91667293	145
ENSMUSG00000099092	miRNA	Mir7062	ENSMUST00000185038	miRNA		7	-1	139986874	66
ENSMUSG00000064510	snRNA	Gm22458	ENSMUST00000082576	snRNA		3	1	157365998	107
ENSMUSG00000076065	miRNA	Mir681	ENSMUST00000102111	miRNA		12	-1	69763944	110
ENSMUSG00000070166	snoRNA	Gm25821	ENSMUST00000093657	snoRNA		12	1	21287927	133
ENSMUSG00000098869	misc_RNA	Gm27465	ENSMUST00000184290	misc_RNA		3	1	72312941	91
ENSMUSG00000075770	snoRNA	Gm22589	ENSMUST00000101824	snoRNA		17	1	35242678	77
ENSMUSG00000076232	miRNA	Gm22760	ENSMUST00000102277	miRNA		11	-1	70762232	93
ENSMUSG00000089383	snRNA	Gm24676	ENSMUST00000158758	snRNA		6	1	130081419	75
ENSMUSG00000089513	snRNA	Gm24875	ENSMUST00000158888	snRNA		2	-1	25031453	104
ENSMUSG00000098960	miRNA	Mir7056	ENSMUST00000183776	miRNA		7	-1	47083224	59
ENSMUSG00000089405	rRNA	Gm24876	ENSMUST00000158780	rRNA		14	-1	75745940	92
ENSMUSG00000088897	snoRNA	Gm22521	ENSMUST00000158272	snoRNA		15	1	62793201	134
ENSMUSG00000092994	rRNA	Gm23918	ENSMUST00000175253	rRNA		19	1	37179186	106
ENSMUSG00000087947	snRNA	Gm24249	ENSMUST00000157322	snRNA		7	-1	88087251	64
ENSMUSG00000094980	snRNA	Gm23727	ENSMUST00000083352	snRNA		6	1	78911167	164
ENSMUSG00000099202	miRNA	Mir7017	ENSMUST00000184894	miRNA		4	1	133195655	62
ENSMUSG00000095722	snRNA	Gm23648	ENSMUST00000180301	snRNA		6	1	18727292	107
ENSMUSG00000064477	snoRNA	Gm23404	ENSMUST00000082543	snoRNA		X	-1	156456095	97
ENSMUSG00000096406	rRNA	Rn5s	ENSMUST00000177555	rRNA		8	-1	123598276	119
ENSMUSG00000105122	miRNA	Gm44407	ENSMUST00000199061	miRNA		X	1	27598618	86
ENSMUSG00000077212	snoRNA	Snord69	ENSMUST00000104024	snoRNA		14	-1	31014366	80
ENSMUSG00000080653	miRNA	Mir669e	ENSMUST00000117003	miRNA		2	1	10467495	119
ENSMUSG00000089484	snRNA	Gm24735	ENSMUST00000158859	snRNA		8	-1	22822545	118
ENSMUSG00000101392	snRNA	Gm29163	ENSMUST00000188029	snRNA		9	-1	83938475	107
ENSMUSG00000087752	snRNA	Gm23467	ENSMUST00000157127	snRNA		3	1	138343138	159
ENSMUSG00000092816	miRNA	Gm23637	ENSMUST00000175075	miRNA		18	-1	9827119	94
ENSMUSG00000098262	misc_RNA	Gm27520	ENSMUST00000184872	misc_RNA		X	1	103480946	81
ENSMUSG00000064691	snRNA	Gm24149	ENSMUST00000082757	snRNA		11	-1	109067090	107
ENSMUSG00000065346	snoRNA	Gm25582	ENSMUST00000083412	snoRNA		9	1	95624502	110
ENSMUSG00000084598	misc_RNA	Gm23867	ENSMUST00000122649	misc_RNA		X	-1	162305302	274
ENSMUSG00000065367	snRNA	Gm24410	ENSMUST00000083433	snRNA		8	-1	27421430	107
ENSMUSG00000064837	snoRNA	Snora75	ENSMUST00000082903	snoRNA		1	-1	86351301	133
ENSMUSG00000095027	miRNA	Gm24017	ENSMUST00000178726	miRNA		13	1	50262394	109
ENSMUSG00000094605	snRNA	Gm25873	ENSMUST00000180317	snRNA		16	1	43126233	107
ENSMUSG00000104666	miRNA	Gm44452	ENSMUST00000104806	miRNA		X	1	27493556	86
ENSMUSG00000094895	snRNA	Gm22286	ENSMUST00000179708	snRNA		9	-1	47525722	107
ENSMUSG00000089520	snoRNA	Gm23831	ENSMUST00000158895	snoRNA		3	-1	39799716	85
ENSMUSG00000088766	snoRNA	Gm24394	ENSMUST00000158141	snoRNA		14	1	36612117	123
ENSMUSG00000088576	misc_RNA	Gm24532	ENSMUST00000157951	misc_RNA		17	-1	43961841	286
ENSMUSG00000070129	miRNA	Mir3071	ENSMUST00000093621	miRNA		12	-1	109595397	80
ENSMUSG00000065079	snRNA	Gm23464	ENSMUST00000083145	snRNA		3	-1	90560702	147
ENSMUSG00000080594	miRNA	Mir669h	ENSMUST00000116944	miRNA		2	1	10518155	125
ENSMUSG00000077559	snoRNA	Gm23175	ENSMUST00000104371	snoRNA		3	-1	33959200	132
ENSMUSG00000095070	snRNA	Gm24508	ENSMUST00000180104	snRNA		16	1	84294535	107
ENSMUSG00000076217	miRNA	Mir706	ENSMUST00000102262	miRNA		6	-1	120034311	84
ENSMUSG00000088639	miRNA	Mir1955	ENSMUST00000158014	miRNA		2	1	92191977	98
ENSMUSG00000065825	snRNA	Gm26314	ENSMUST00000083891	snRNA		X	1	11850484	107
ENSMUSG00000096357	snRNA	Gm25709	ENSMUST00000178844	snRNA		10	-1	117662388	107
ENSMUSG00000064626	snRNA	Gm22306	ENSMUST00000082692	snRNA		2	1	37282051	107
ENSMUSG00000089544	miRNA	Gm25837	ENSMUST00000158919	miRNA		11	1	115253278	108
ENSMUSG00000077312	snoRNA	Gm24170	ENSMUST00000104124	snoRNA		4	-1	73589214	133
ENSMUSG00000065520	miRNA	Mir128-1	ENSMUST00000083586	miRNA		1	1	128202361	70
ENSMUSG00000094188	snRNA	Gm22621	ENSMUST00000179678	snRNA		6	1	130113291	74
ENSMUSG00000093246	miRNA	Gm24572	ENSMUST00000175505	miRNA		16	-1	18284637	88
ENSMUSG00000093852	rRNA	Gm24312	ENSMUST00000178677	rRNA		8	-1	123582968	119
ENSMUSG00000093162	miRNA	Gm22184	ENSMUST00000175421	miRNA		6	-1	86574161	62
ENSMUSG00000088502	snRNA	Gm22787	ENSMUST00000157877	snRNA		11	-1	24554058	73
ENSMUSG00000076385	miRNA	Gm24462	ENSMUST00000102430	miRNA		3	-1	38558214	106
ENSMUSG00000096906	miRNA	Gm26506	ENSMUST00000179692	miRNA		7	1	103581267	110
ENSMUSG00000096441	miRNA	Gm26140	ENSMUST00000103807	miRNA		12	1	23199780	110
ENSMUSG00000105758	miRNA	Mirlet7e	ENSMUST00000196737	miRNA		17	1	17830352	93
ENSMUSG00000065676	snoRNA	Snord42b	ENSMUST00000083742	snoRNA		11	-1	78183124	69
ENSMUSG00000095898	snRNA	Gm24796	ENSMUST00000104007	snRNA		4	1	93600979	107
ENSMUSG00000096758	snoRNA	Gm25466	ENSMUST00000103995	snoRNA		14	1	11335873	132
ENSMUSG00000064792	snoRNA	Gm24355	ENSMUST00000082858	snoRNA		6	-1	52639355	122
ENSMUSG00000080573	miRNA	Mir467f	ENSMUST00000116923	miRNA		11	-1	69635519	120
ENSMUSG00000089245	miRNA	Gm24053	ENSMUST00000158620	miRNA		1	1	54769218	105
ENSMUSG00000080349	miRNA	Gm24590	ENSMUST00000116699	miRNA		12	-1	62599010	119
ENSMUSG00000065582	miRNA	Mir194-2	ENSMUST00000083648	miRNA		19	1	6264643	86
ENSMUSG00000065151	snoRNA	Gm25480	ENSMUST00000083217	snoRNA		4	1	66544061	133
ENSMUSG00000096248	snoRNA	Gm24264	ENSMUST00000179835	snoRNA		7	-1	59698400	94
ENSMUSG00000088868	snoRNA	Gm23072	ENSMUST00000158243	snoRNA		2	1	46306336	123
ENSMUSG00000096212	miRNA	Gm23739	ENSMUST00000102295	miRNA		13	-1	61804248	108
ENSMUSG00000065147	snoRNA	Snora31	ENSMUST00000083213	snoRNA		14	1	75847905	130
ENSMUSG00000089410	misc_RNA	Gm22014	ENSMUST00000158785	misc_RNA		18	-1	84737391	290
ENSMUSG00000092852	miRNA	Mir5103	ENSMUST00000175111	miRNA		1	-1	34433199	79
ENSMUSG00000099252	misc_RNA	Gm27265	ENSMUST00000183559	misc_RNA		4	1	43905078	77
ENSMUSG00000094494	snRNA	Rnu6-ps2	ENSMUST00000178059	snRNA		4	1	119528000	107
ENSMUSG00000089027	snoRNA	Gm25013	ENSMUST00000158402	snoRNA		3	-1	120610093	128
ENSMUSG00000088429	snRNA	Gm22557	ENSMUST00000157804	snRNA		5	1	107302946	102
ENSMUSG00000096849	snRNA	Gm25598	ENSMUST00000179031	snRNA		17	-1	15837655	107
ENSMUSG00000098392	rRNA	Gm28001	ENSMUST00000183561	rRNA		3	1	96485161	117
ENSMUSG00000077243	snoRNA	Gm23270	ENSMUST00000104055	snoRNA		18	-1	58615489	131
ENSMUSG00000080508	miRNA	Gm25041	ENSMUST00000116858	miRNA		16	1	53885370	65
ENSMUSG00000088855	snRNA	Gm24724	ENSMUST00000158230	snRNA		19	-1	53159863	107
ENSMUSG00000089542	snoRNA	Gm25835	ENSMUST00000158917	snoRNA		11	-1	69668995	144
ENSMUSG00000089498	snRNA	Gm26359	ENSMUST00000158873	snRNA		10	-1	67235961	101
ENSMUSG00000064939	snRNA	Gm23721	ENSMUST00000083005	snRNA		11	-1	61936552	107
ENSMUSG00000089299	snoRNA	Gm24637	ENSMUST00000158674	snoRNA		1	1	165440625	85
ENSMUSG00000080549	miRNA	Gm22715	ENSMUST00000116899	miRNA		8	-1	120443549	91
ENSMUSG00000098840	miRNA	Mir7679	ENSMUST00000183379	miRNA		11	-1	82985065	63
ENSMUSG00000088888	snoRNA	Gm24210	ENSMUST00000158263	snoRNA		7	-1	102734714	133
ENSMUSG00000084441	snRNA	Gm26255	ENSMUST00000122492	snRNA		14	1	110732036	103
ENSMUSG00000094263	snoRNA	Snord50a	ENSMUST00000178154	snoRNA		9	-1	88521600	72
ENSMUSG00000084588	rRNA	n-R5s68	ENSMUST00000122639	rRNA		11	1	27085126	82
ENSMUSG00000084661	snRNA	Gm24635	ENSMUST00000122712	snRNA		13	1	80158663	128
ENSMUSG00000089146	misc_RNA	Gm25266	ENSMUST00000158521	misc_RNA		10	1	94948590	304
ENSMUSG00000084646	snRNA	Gm24381	ENSMUST00000122697	snRNA		4	-1	149517282	104
ENSMUSG00000105379	miRNA	Mir1191b	ENSMUST00000199973	miRNA		10	-1	81416297	58
ENSMUSG00000098247	miRNA	Mir7220	ENSMUST00000183978	miRNA		18	1	60953873	60
ENSMUSG00000075874	rRNA	n-R5s1	ENSMUST00000101925	rRNA		Y	-1	991748	119
ENSMUSG00000087806	snoRNA	Gm23432	ENSMUST00000157181	snoRNA		3	-1	119638874	131
ENSMUSG00000089587	snoRNA	Gm23339	ENSMUST00000158962	snoRNA		6	1	105232605	139
ENSMUSG00000088165	misc_RNA	Gm23533	ENSMUST00000157540	misc_RNA		10	1	42309775	245
ENSMUSG00000065815	snRNA	Gm24697	ENSMUST00000083881	snRNA		4	1	69110671	107
ENSMUSG00000065034	snRNA	Gm22363	ENSMUST00000083100	snRNA		6	-1	42775680	108
ENSMUSG00000064558	snoRNA	Gm24620	ENSMUST00000082624	snoRNA		13	-1	46767649	130
ENSMUSG00000092725	miRNA	Gm25678	ENSMUST00000174984	miRNA		11	1	72648925	73
ENSMUSG00000089346	snRNA	Gm22663	ENSMUST00000158721	snRNA		12	-1	51740342	102
ENSMUSG00000095068	snRNA	Gm26189	ENSMUST00000179879	snRNA		9	1	13275516	107
ENSMUSG00000064880	snoRNA	Gm24201	ENSMUST00000082946	snoRNA		16	1	23110383	125
ENSMUSG00000089297	snoRNA	Gm24634	ENSMUST00000158672	snoRNA		14	-1	106517495	107
ENSMUSG00000076123	miRNA	Mir700	ENSMUST00000102169	miRNA		4	-1	135416633	79
ENSMUSG00000088630	snoRNA	Gm22312	ENSMUST00000158005	snoRNA		6	1	93509573	130
ENSMUSG00000093107	scaRNA	Mir1839	ENSMUST00000175366	scaRNA		7	1	81529855	127
ENSMUSG00000093345	misc_RNA	Gm27956	ENSMUST00000175604	misc_RNA		8	-1	106071874	260
ENSMUSG00000070144	miRNA	Mir1a-1	ENSMUST00000093635	miRNA		2	1	180389048	77
ENSMUSG00000077280	snoRNA	Gm25764	ENSMUST00000104092	snoRNA		10	1	129302091	134
ENSMUSG00000094069	snoRNA	Gm25155	ENSMUST00000178450	snoRNA		7	-1	59700971	94
ENSMUSG00000105312	miRNA	Gm47291	ENSMUST00000196848	miRNA		2	1	32675108	65
ENSMUSG00000094726	snRNA	Gm23355	ENSMUST00000177614	snRNA		16	1	82543229	107
ENSMUSG00000065371	snRNA	Gm22739	ENSMUST00000083437	snRNA		10	1	4484234	160
ENSMUSG00000092834	miRNA	Gm24818	ENSMUST00000175093	miRNA		14	1	108379564	161
ENSMUSG00000098622	miRNA	Gm27974	ENSMUST00000183415	miRNA		3	-1	33260820	105
ENSMUSG00000088703	rRNA	Gm25555	ENSMUST00000158078	rRNA		17	-1	32804977	111
ENSMUSG00000096005	snRNA	Gm24863	ENSMUST00000179499	snRNA		13	1	79454970	107
ENSMUSG00000065664	snRNA	Gm22578	ENSMUST00000083730	snRNA		6	-1	149052623	107
ENSMUSG00000098329	miRNA	Mir6966	ENSMUST00000183975	miRNA		17	1	25780808	72
ENSMUSG00000092972	miRNA	Mir3078	ENSMUST00000175231	miRNA		14	1	64591185	87
ENSMUSG00000095094	miRNA	Gm23659	ENSMUST00000102245	miRNA		16	1	65432137	110
ENSMUSG00000095205	snoRNA	Snord93	ENSMUST00000175580	snoRNA		5	1	23852210	71
ENSMUSG00000084686	snoRNA	Gm22027	ENSMUST00000122737	snoRNA		3	1	96176361	127
ENSMUSG00000065423	miRNA	Mir181a-2	ENSMUST00000083489	miRNA		2	1	38852735	76
ENSMUSG00000077457	snoRNA	Snord65	ENSMUST00000104269	snoRNA		11	1	62604515	72
ENSMUSG00000077535	snRNA	Gm22543	ENSMUST00000104347	snRNA		16	1	40306219	94
ENSMUSG00000099210	miRNA	Mir7051	ENSMUST00000184167	miRNA		7	1	43457497	73
ENSMUSG00000088308	snoRNA	Gm24507	ENSMUST00000157683	snoRNA		13	1	90098981	134
ENSMUSG00000088464	miRNA	Mir1970	ENSMUST00000157839	miRNA		X	-1	135786217	104
ENSMUSG00000098482	miRNA	Mir6363	ENSMUST00000184880	miRNA		16	1	50727132	114
ENSMUSG00000065799	snoRNA	Gm25517	ENSMUST00000083865	snoRNA		14	-1	75972619	134
ENSMUSG00000087960	misc_RNA	Gm25392	ENSMUST00000157335	misc_RNA		18	1	19707093	297
ENSMUSG00000076994	miRNA	Mir466b-3	ENSMUST00000103806	miRNA		2	1	10503565	81
ENSMUSG00000064770	rRNA	n-R5s29	ENSMUST00000082836	rRNA		17	1	78858934	119
ENSMUSG00000077337	snoRNA	Gm23012	ENSMUST00000104149	snoRNA		13	1	75691972	83
ENSMUSG00000088280	snoRNA	Gm23584	ENSMUST00000157655	snoRNA		10	1	48437822	129
ENSMUSG00000089450	snRNA	Gm24225	ENSMUST00000158825	snRNA		9	-1	66981185	98
ENSMUSG00000098415	miRNA	Mir6928	ENSMUST00000185166	miRNA		11	1	101030340	70
ENSMUSG00000088753	snoRNA	Gm24900	ENSMUST00000158128	snoRNA		18	1	67462342	134
ENSMUSG00000065502	miRNA	Mir202	ENSMUST00000083568	miRNA		7	-1	139957760	72
ENSMUSG00000064671	snoRNA	Gm22807	ENSMUST00000082737	snoRNA		11	-1	20847881	129
ENSMUSG00000105635	miRNA	Gm44469	ENSMUST00000198558	miRNA		14	1	18200675	79
ENSMUSG00000089359	snoRNA	Gm25490	ENSMUST00000158734	snoRNA		11	1	15452422	130
ENSMUSG00000089596	misc_RNA	Nron	ENSMUST00000158971	misc_RNA		2	1	33812957	370
ENSMUSG00000070074	miRNA	Mir484	ENSMUST00000093566	miRNA		16	1	14159626	67
ENSMUSG00000098575	misc_RNA	Gm27446	ENSMUST00000183963	misc_RNA		2	1	20559804	89
ENSMUSG00000094823	rRNA	n-R5s166	ENSMUST00000082898	rRNA		6	1	132564972	121
ENSMUSG00000088014	misc_RNA	Gm23743	ENSMUST00000157389	misc_RNA		4	-1	109161197	274
ENSMUSG00000065049	snRNA	Gm24041	ENSMUST00000083115	snRNA		15	-1	58819478	156
ENSMUSG00000076118	miRNA	Mir669c	ENSMUST00000084675	miRNA		2	1	10509296	109
ENSMUSG00000098776	miRNA	Gm27438	ENSMUST00000183480	miRNA		2	-1	87256904	110
ENSMUSG00000064397	misc_RNA	Gm23624	ENSMUST00000082463	misc_RNA		9	-1	120791785	321
ENSMUSG00000064706	misc_RNA	Gm22508	ENSMUST00000082772	misc_RNA		18	-1	69778045	110
ENSMUSG00000087923	snRNA	Gm23230	ENSMUST00000157298	snRNA		4	-1	114845117	133
ENSMUSG00000096377	miRNA	Mir5123	ENSMUST00000177794	miRNA		4	-1	40850138	83
ENSMUSG00000064780	snoRNA	Snord95	ENSMUST00000082846	snoRNA		11	1	48803139	68
ENSMUSG00000088297	snoRNA	Gm26408	ENSMUST00000157672	snoRNA		2	-1	71999792	127
ENSMUSG00000065619	miRNA	Mir183	ENSMUST00000083685	miRNA		6	-1	30169737	70
ENSMUSG00000065911	misc_RNA	Gm24447	ENSMUST00000083977	misc_RNA		15	1	93234363	338
ENSMUSG00000077347	snRNA	Gm24671	ENSMUST00000104159	snRNA		5	1	121356844	158
ENSMUSG00000065828	snRNA	Gm26317	ENSMUST00000083894	snRNA		X	1	162069457	107
ENSMUSG00000098944	miRNA	Mir8120	ENSMUST00000185035	miRNA		3	1	65659288	139
ENSMUSG00000088414	miRNA	Mir1967	ENSMUST00000157789	miRNA		8	1	124022641	82
ENSMUSG00000088819	misc_RNA	Gm22388	ENSMUST00000158194	misc_RNA		17	1	37015343	248
ENSMUSG00000098397	miRNA	Mir7669	ENSMUST00000183442	miRNA		3	-1	90011210	58
ENSMUSG00000065045	snRNA	Gm24046	ENSMUST00000083111	snRNA		3	-1	89968163	165
ENSMUSG00000095703	snoRNA	Gm24829	ENSMUST00000179245	snoRNA		8	-1	21594129	92
ENSMUSG00000077464	snoRNA	Gm26422	ENSMUST00000104276	snoRNA		2	1	61280278	132
ENSMUSG00000075906	snRNA	Gm23942	ENSMUST00000101956	snRNA		7	-1	5277450	107
ENSMUSG00000105853	miRNA	Mir376b	ENSMUST00000195930	miRNA		12	1	109723458	82
ENSMUSG00000089349	snoRNA	Gm22670	ENSMUST00000158724	snoRNA		4	1	47920755	143
ENSMUSG00000084417	snRNA	Gm23463	ENSMUST00000122468	snRNA		2	1	157726000	99
ENSMUSG00000089415	snoRNA	Gm22011	ENSMUST00000158790	snoRNA		5	-1	77669846	123
ENSMUSG00000077268	snoRNA	Gm24433	ENSMUST00000104080	snoRNA		10	1	95898603	133
ENSMUSG00000088162	misc_RNA	Gm23539	ENSMUST00000157537	misc_RNA		8	-1	31544686	224
ENSMUSG00000065395	miRNA	Mir193a	ENSMUST00000083461	miRNA		11	1	79711969	66
ENSMUSG00000094059	snoRNA	Gm23471	ENSMUST00000177886	snoRNA		7	-1	59434355	79
ENSMUSG00000093352	miRNA	Gm23291	ENSMUST00000175611	miRNA		12	-1	99982852	78
ENSMUSG00000077476	snoRNA	Gm24794	ENSMUST00000104288	snoRNA		17	1	12301036	140
ENSMUSG00000088843	snRNA	Gm26357	ENSMUST00000158218	snRNA		10	-1	88165073	115
ENSMUSG00000089203	snoRNA	Gm26211	ENSMUST00000158578	snoRNA		12	1	24779018	129
ENSMUSG00000098542	miRNA	Gm27532	ENSMUST00000183726	miRNA		14	-1	22022070	113
ENSMUSG00000098490	miRNA	Mir7089	ENSMUST00000184522	miRNA		9	1	109889643	68
ENSMUSG00000088270	snRNA	Gm23122	ENSMUST00000157645	snRNA		10	-1	83158127	103
ENSMUSG00000064613	snRNA	Gm24621	ENSMUST00000082679	snRNA		4	1	129458351	140
ENSMUSG00000096547	snRNA	Gm25235	ENSMUST00000179933	snRNA		1	-1	170832871	107
ENSMUSG00000093952	rRNA	n-R5s195	ENSMUST00000082891	rRNA		3	-1	39636082	119
ENSMUSG00000089385	snoRNA	Gm24681	ENSMUST00000158760	snoRNA		16	-1	68452965	107
ENSMUSG00000092842	miRNA	Gm24333	ENSMUST00000175101	miRNA		8	-1	65093914	84
ENSMUSG00000089516	snRNA	Gm26290	ENSMUST00000158891	snRNA		9	-1	20209351	145
ENSMUSG00000089350	snoRNA	Gm25487	ENSMUST00000158725	snoRNA		3	-1	41441467	125
ENSMUSG00000093156	miRNA	Mir3076	ENSMUST00000175415	miRNA		14	1	30572149	60
ENSMUSG00000099319	miRNA	Mir7648	ENSMUST00000183650	miRNA		15	1	90224360	53
ENSMUSG00000089468	snRNA	Gm27649	ENSMUST00000158843	snRNA		12	-1	116478281	64
ENSMUSG00000077869	miRNA	Mir344e	ENSMUST00000104677	miRNA		7	-1	61735602	66
ENSMUSG00000077085	miRNA	Gm23697	ENSMUST00000103897	miRNA		3	-1	92010865	110
ENSMUSG00000104689	miRNA	Gm44482	ENSMUST00000199232	miRNA		14	1	75262013	103
ENSMUSG00000093052	miRNA	Gm24816	ENSMUST00000175311	miRNA		6	-1	90681520	151
ENSMUSG00000064702	snRNA	Gm24950	ENSMUST00000082768	snRNA		11	1	101641748	191
ENSMUSG00000088450	snRNA	Gm26369	ENSMUST00000157825	snRNA		16	-1	55779144	100
ENSMUSG00000096434	snRNA	Gm22129	ENSMUST00000179034	snRNA		16	-1	17205898	107
ENSMUSG00000105098	miRNA	Gm47312	ENSMUST00000196300	miRNA		8	-1	9770880	153
ENSMUSG00000088911	snoRNA	Gm22609	ENSMUST00000158286	snoRNA		1	-1	132814348	121
ENSMUSG00000065138	snRNA	Gm24458	ENSMUST00000083204	snRNA		3	1	151608343	107
ENSMUSG00000088149	snRNA	Gm24716	ENSMUST00000157524	snRNA		13	-1	56342528	104
ENSMUSG00000099312	misc_RNA	Gm27733	ENSMUST00000184803	misc_RNA		X	-1	103461285	68
ENSMUSG00000105411	miRNA	Gm44488	ENSMUST00000199467	miRNA		13	-1	119269604	119
ENSMUSG00000098474	miRNA	Mir6919	ENSMUST00000185146	miRNA		11	1	50232245	62
ENSMUSG00000089046	snoRNA	Gm26172	ENSMUST00000158421	snoRNA		13	1	18922577	134
ENSMUSG00000084485	misc_RNA	Gm23789	ENSMUST00000122536	misc_RNA		15	1	58565614	301
ENSMUSG00000080430	miRNA	Gm24275	ENSMUST00000116780	miRNA		11	-1	64590640	146
ENSMUSG00000065492	miRNA	Mir34b	ENSMUST00000083558	miRNA		9	-1	51103645	84
ENSMUSG00000065094	snoRNA	Snord1a	ENSMUST00000083160	snoRNA		11	1	116674598	74
ENSMUSG00000089442	snoRNA	Gm22529	ENSMUST00000158817	snoRNA		6	-1	25200051	123
ENSMUSG00000089427	snoRNA	Gm26005	ENSMUST00000158802	snoRNA		17	-1	87453356	134
ENSMUSG00000093276	miRNA	Gm26237	ENSMUST00000175535	miRNA		8	1	72684314	125
ENSMUSG00000098952	miRNA	Mir6405	ENSMUST00000184584	miRNA		19	1	44808406	124
ENSMUSG00000096514	snoRNA	Gm25891	ENSMUST00000180050	snoRNA		6	1	123506711	132
ENSMUSG00000064855	snRNA	Gm24526	ENSMUST00000082921	snRNA		9	1	63027560	158
ENSMUSG00000077295	snoRNA	Gm24122	ENSMUST00000104107	snoRNA		1	-1	102106580	132
ENSMUSG00000076199	miRNA	Gm23255	ENSMUST00000102244	miRNA		8	-1	73641505	110
ENSMUSG00000088947	rRNA	Gm23257	ENSMUST00000158322	rRNA		4	1	43692686	132
ENSMUSG00000065457	miRNA	Mir383	ENSMUST00000083523	miRNA		8	-1	38252202	70
ENSMUSG00000076444	miRNA	Mir761	ENSMUST00000103245	miRNA		4	1	109017655	76
ENSMUSG00000094037	snoRNA	Gm24652	ENSMUST00000178223	snoRNA		7	-1	59567169	79
ENSMUSG00000093178	snoRNA	Snord87	ENSMUST00000175437	snoRNA		1	-1	9942549	87
ENSMUSG00000084682	misc_RNA	Gm22024	ENSMUST00000122733	misc_RNA		8	1	83752918	287
ENSMUSG00000094642	snoRNA	Snord116l10	ENSMUST00000179053	snoRNA		7	-1	59899780	94
ENSMUSG00000084734	snoRNA	Gm25804	ENSMUST00000122785	snoRNA		13	1	13329484	188
ENSMUSG00000105030	miRNA	Gm38671	ENSMUST00000200573	miRNA		8	1	12947941	130
ENSMUSG00000093061	miRNA	Mir5098	ENSMUST00000175320	miRNA		5	1	77272757	82
ENSMUSG00000092787	miRNA	Mir5116	ENSMUST00000175046	miRNA		X	-1	56587914	63
ENSMUSG00000098402	miRNA	Gm27409	ENSMUST00000184727	miRNA		8	1	47591668	80
ENSMUSG00000105100	miRNA	Gm44349	ENSMUST00000197048	miRNA		11	1	69980692	123
ENSMUSG00000098756	miRNA	Mir378d	ENSMUST00000184232	miRNA		10	-1	126710391	110
ENSMUSG00000077575	snoRNA	Gm24888	ENSMUST00000104387	snoRNA		7	1	109521280	130
ENSMUSG00000088409	snRNA	Gm25882	ENSMUST00000157784	snRNA		6	1	136417812	85
ENSMUSG00000065453	miRNA	Mirlet7d	ENSMUST00000083519	miRNA		13	-1	48536114	103
ENSMUSG00000093286	miRNA	Gm22569	ENSMUST00000175545	miRNA		1	1	155315966	124
ENSMUSG00000093219	miRNA	Mir3113	ENSMUST00000175478	miRNA		X	1	151859562	76
ENSMUSG00000088362	snoRNA	Gm23498	ENSMUST00000157737	snoRNA		6	1	145366858	87
ENSMUSG00000088907	snoRNA	Gm25437	ENSMUST00000158282	snoRNA		19	1	19275899	132
ENSMUSG00000096882	snRNA	Gm23570	ENSMUST00000083029	snRNA		5	1	20092615	104
ENSMUSG00000093139	snoRNA	Gm25999	ENSMUST00000175398	snoRNA		15	-1	99255014	133
ENSMUSG00000098686	miRNA	Mir6973b	ENSMUST00000184185	miRNA		2	-1	131040398	80
ENSMUSG00000077441	snoRNA	Gm23131	ENSMUST00000104253	snoRNA		3	-1	148354218	132
ENSMUSG00000076064	miRNA	Mir690	ENSMUST00000102110	miRNA		16	-1	28600043	109
ENSMUSG00000095100	snoRNA	Gm22128	ENSMUST00000180346	snoRNA		7	-1	59771749	94
ENSMUSG00000089005	snRNA	Gm23856	ENSMUST00000158380	snRNA		9	1	107905228	99
ENSMUSG00000070136	miRNA	Mir496a	ENSMUST00000093627	miRNA		12	1	109739119	79
ENSMUSG00000106088	miRNA	Gm44342	ENSMUST00000196874	miRNA		15	1	101692211	129
ENSMUSG00000092696	miRNA	Mir5133	ENSMUST00000174955	miRNA		9	-1	62122594	77
ENSMUSG00000098859	misc_RNA	Gm27389	ENSMUST00000183622	misc_RNA		7	1	143273053	195
ENSMUSG00000080443	miRNA	Gm25847	ENSMUST00000116793	miRNA		12	1	87034766	96
ENSMUSG00000092720	rRNA	Gm25675	ENSMUST00000174979	rRNA		12	-1	119919441	118
ENSMUSG00000096022	snRNA	Gm23421	ENSMUST00000158934	snRNA		17	1	35049218	104
ENSMUSG00000076146	miRNA	Mir449c	ENSMUST00000102192	miRNA		13	1	113035983	109
ENSMUSG00000064529	snRNA	Gm26437	ENSMUST00000082595	snRNA		X	-1	39305481	105
ENSMUSG00000096200	snRNA	Gm23186	ENSMUST00000180078	snRNA		17	1	4678020	107
ENSMUSG00000088064	snRNA	Gm24478	ENSMUST00000157439	snRNA		2	-1	162816468	158
ENSMUSG00000089260	miRNA	Mir1929	ENSMUST00000158635	miRNA		10	1	44359676	93
ENSMUSG00000076407	miRNA	Gm22689	ENSMUST00000102452	miRNA		13	-1	7120503	110
ENSMUSG00000088419	snoRNA	Gm24236	ENSMUST00000157794	snoRNA		8	-1	63108807	134
ENSMUSG00000065757	snoRNA	Gm23347	ENSMUST00000083823	snoRNA		12	1	109673913	82
ENSMUSG00000092841	miRNA	Gm24330	ENSMUST00000175100	miRNA		10	-1	121618543	76
ENSMUSG00000080529	miRNA	Gm23882	ENSMUST00000116879	miRNA		18	1	35952824	84
ENSMUSG00000065259	snoRNA	Snora30	ENSMUST00000083325	snoRNA		7	1	127527874	130
ENSMUSG00000089070	snRNA	Gm24498	ENSMUST00000158445	snRNA		13	-1	89927543	102
ENSMUSG00000065400	miRNA	Mir200a	ENSMUST00000083466	miRNA		4	-1	156054985	90
ENSMUSG00000096447	snoRNA	Gm24206	ENSMUST00000179011	snoRNA		7	-1	59539076	79
ENSMUSG00000095944	rRNA	n-R5s210	ENSMUST00000177688	rRNA		1	1	37005439	119
ENSMUSG00000089556	snoRNA	Gm24175	ENSMUST00000158931	snoRNA		6	-1	125258177	129
ENSMUSG00000088085	snRNA	Gm25343	ENSMUST00000157460	snRNA		5	-1	117976560	107
ENSMUSG00000096799	snoRNA	Gm22996	ENSMUST00000180236	snoRNA		7	-1	59375791	79
ENSMUSG00000087712	snRNA	Gm25828	ENSMUST00000157087	snRNA		X	-1	101912724	95
ENSMUSG00000088314	snoRNA	Gm26186	ENSMUST00000157689	snoRNA		4	-1	121075922	125
ENSMUSG00000096815	miRNA	Gm25086	ENSMUST00000179931	miRNA		9	-1	10295156	110
ENSMUSG00000095618	snoRNA	Gm26246	ENSMUST00000178388	snoRNA		7	-1	59789424	94
ENSMUSG00000077719	snoRNA	Gm25724	ENSMUST00000104531	snoRNA		14	-1	104629060	117
ENSMUSG00000077649	snoRNA	Gm24989	ENSMUST00000104461	snoRNA		11	-1	77245015	88
ENSMUSG00000094670	snoRNA	Gm22006	ENSMUST00000178731	snoRNA		X	-1	135385028	114
ENSMUSG00000064858	snoRNA	Snora43	ENSMUST00000082924	snoRNA		2	-1	26637974	127
ENSMUSG00000092704	snRNA	Gm24512	ENSMUST00000174963	snRNA		5	-1	22645183	65
ENSMUSG00000088480	snRNA	Gm23643	ENSMUST00000157855	snRNA		18	-1	3770804	64
ENSMUSG00000087975	misc_RNA	Gm23718	ENSMUST00000157350	misc_RNA		X	1	53306177	307
ENSMUSG00000089525	misc_RNA	Gm23833	ENSMUST00000158900	misc_RNA		17	1	12770631	252
ENSMUSG00000078026	miRNA	Mir466o	ENSMUST00000104832	miRNA		2	1	10472540	84
ENSMUSG00000098677	miRNA	Mir7684	ENSMUST00000183858	miRNA		15	-1	82393978	60
ENSMUSG00000095146	miRNA	Gm24387	ENSMUST00000104625	miRNA		6	1	113422150	90
ENSMUSG00000104628	miRNA	Gm44319	ENSMUST00000196974	miRNA		2	1	159069863	93
ENSMUSG00000065295	snoRNA	Gm24134	ENSMUST00000083361	snoRNA		2	1	26912530	71
ENSMUSG00000077214	snoRNA	Gm23950	ENSMUST00000104026	snoRNA		4	1	64444730	129
ENSMUSG00000077163	snRNA	Gm24116	ENSMUST00000103975	snRNA		7	-1	55244039	107
ENSMUSG00000096341	snRNA	Gm22886	ENSMUST00000093714	snRNA		18	-1	21380931	107
ENSMUSG00000088243	snRNA	Gm25914	ENSMUST00000157618	snRNA		9	1	20173087	153
ENSMUSG00000065471	miRNA	Mir222	ENSMUST00000083537	miRNA		X	-1	19146971	79
ENSMUSG00000098476	miRNA	Gm27852	ENSMUST00000184614	miRNA		8	-1	19535408	90
ENSMUSG00000088143	snRNA	Gm24720	ENSMUST00000157518	snRNA		18	-1	83355364	166
ENSMUSG00000095660	snoRNA	Gm22274	ENSMUST00000178441	snoRNA		7	-1	59565296	79
ENSMUSG00000089024	snoRNA	Gm25016	ENSMUST00000158399	snoRNA		10	-1	25266175	131
ENSMUSG00000093153	miRNA	Gm25033	ENSMUST00000175412	miRNA		7	1	35081910	70
ENSMUSG00000088890	snoRNA	Gm22517	ENSMUST00000158265	snoRNA		2	1	151123853	136
ENSMUSG00000094245	snRNA	Gm23966	ENSMUST00000179823	snRNA		1	-1	58466621	107
ENSMUSG00000098435	misc_RNA	Gm27492	ENSMUST00000185194	misc_RNA		6	1	52246399	187
ENSMUSG00000095723	rRNA	Gm23647	ENSMUST00000175042	rRNA		8	-1	123623745	109
ENSMUSG00000065529	miRNA	Mir22	ENSMUST00000083595	miRNA		11	1	75463716	95
ENSMUSG00000098966	miRNA	Gm27701	ENSMUST00000184498	miRNA		Y	1	20134948	110
ENSMUSG00000098422	miRNA	Mir7016	ENSMUST00000184308	miRNA		4	-1	129684571	72
ENSMUSG00000071036	protein_coding	Gm10309	ENSMUST00000095186	protein_coding	principal1	17	-1	86505232	2005
ENSMUSG00000098511	miRNA	Mir7072	ENSMUST00000184542	miRNA		8	1	94505046	60
ENSMUSG00000088808	snoRNA	Gm24077	ENSMUST00000158183	snoRNA		2	1	151300944	136
ENSMUSG00000088789	scaRNA	Scarna13	ENSMUST00000158164	scaRNA		12	-1	105031349	275
ENSMUSG00000089617	snoRNA	Scarna10	ENSMUST00000158992	snoRNA		6	-1	125186683	325
ENSMUSG00000078002	miRNA	Mir880	ENSMUST00000104809	miRNA		X	-1	66800607	78
ENSMUSG00000093822	snRNA	Gm24801	ENSMUST00000178503	snRNA		16	-1	36218026	105
ENSMUSG00000089501	snoRNA	Gm23479	ENSMUST00000158876	snoRNA		7	1	98935894	122
ENSMUSG00000094641	miRNA	Gm23694	ENSMUST00000179335	miRNA		6	-1	70028091	110
ENSMUSG00000095951	miRNA	Gm23963	ENSMUST00000179603	miRNA		2	-1	9240832	77
ENSMUSG00000106653	miRNA	Mir299a	ENSMUST00000198411	miRNA		12	1	109710638	63
ENSMUSG00000096371	snoRNA	Gm22367	ENSMUST00000178930	snoRNA		6	1	59099253	132
ENSMUSG00000088370	snRNA	Gm22880	ENSMUST00000157745	snRNA		19	-1	17865419	103
ENSMUSG00000065398	miRNA	Mir188	ENSMUST00000083464	miRNA		X	-1	7248056	68
ENSMUSG00000077622	snoRNA	Gm23836	ENSMUST00000104434	snoRNA		4	1	94098290	129
ENSMUSG00000088944	snRNA	Gm23258	ENSMUST00000158319	snRNA		X	1	56750010	106
ENSMUSG00000105621	miRNA	Mirlet7f-1	ENSMUST00000198652	miRNA		13	-1	48537917	89
ENSMUSG00000087817	misc_RNA	Gm22492	ENSMUST00000157192	misc_RNA		9	1	113403475	297
ENSMUSG00000099074	miRNA	Gm27564	ENSMUST00000185196	miRNA		16	-1	58749684	96
ENSMUSG00000094593	miRNA	Gm24744	ENSMUST00000116833	miRNA		3	1	119831937	121
ENSMUSG00000088704	snoRNA	Gm25550	ENSMUST00000158079	snoRNA		15	1	15819227	128
ENSMUSG00000098850	misc_RNA	Gm27390	ENSMUST00000184516	misc_RNA		1	1	63177983	176
ENSMUSG00000098399	snRNA	Gm27995	ENSMUST00000184402	snRNA		7	-1	104340189	100
ENSMUSG00000095092	protein_coding	AC125149.5	ENSMUST00000177562	protein_coding		GL456210.1	-1	110303	366
ENSMUSG00000065238	snRNA	Gm22970	ENSMUST00000083304	snRNA		14	-1	99773808	186
ENSMUSG00000094780	miRNA	Gm24659	ENSMUST00000180212	miRNA		7	-1	89291299	110
ENSMUSG00000093933	snoRNA	Gm25526	ENSMUST00000104332	snoRNA		10	1	41216045	132
ENSMUSG00000077221	snoRNA	Snord67	ENSMUST00000104033	snoRNA		2	1	91596070	111
ENSMUSG00000077299	snRNA	Gm24126	ENSMUST00000104111	snRNA		17	1	76074546	106
ENSMUSG00000084668	snoRNA	Gm24633	ENSMUST00000122719	snoRNA		1	-1	19513919	65
ENSMUSG00000088747	misc_RNA	Gm23224	ENSMUST00000158122	misc_RNA		11	1	72340370	271
ENSMUSG00000065607	miRNA	Mir331	ENSMUST00000083673	miRNA		10	-1	93963863	96
ENSMUSG00000098607	miRNA	Mir6360	ENSMUST00000184278	miRNA		18	-1	23774989	126
ENSMUSG00000065862	snoRNA	Gm24029	ENSMUST00000083928	snoRNA		11	-1	69667976	143
ENSMUSG00000089301	misc_RNA	Gm24841	ENSMUST00000158676	misc_RNA		8	1	87636657	357
ENSMUSG00000094703	snRNA	Gm24486	ENSMUST00000178420	snRNA		10	1	70882104	107
ENSMUSG00000099039	misc_RNA	Gm27928	ENSMUST00000183747	misc_RNA		14	1	61666387	256
ENSMUSG00000092851	miRNA	Gm25960	ENSMUST00000175110	miRNA		2	-1	72950987	125
ENSMUSG00000077659	snoRNA	Gm23323	ENSMUST00000104471	snoRNA		9	1	123162371	133
ENSMUSG00000096031	miRNA	Gm23189	ENSMUST00000178954	miRNA		1	1	67973676	102
ENSMUSG00000094894	miRNA	Mir465b-1	ENSMUST00000103940	miRNA		X	-1	66829280	79
ENSMUSG00000089001	snoRNA	Gm23852	ENSMUST00000158376	snoRNA		16	1	61070018	77
ENSMUSG00000070106	miRNA	Mir363	ENSMUST00000093598	miRNA		X	-1	52741767	75
ENSMUSG00000098310	miRNA	Mir8118	ENSMUST00000183962	miRNA		4	1	33438081	129
ENSMUSG00000080659	miRNA	Gm24484	ENSMUST00000117009	miRNA		19	1	9908158	121
ENSMUSG00000097854	protein_coding	Gm26602	ENSMUST00000181321	protein_coding	principal1	10	1	79910856	285
ENSMUSG00000076305	miRNA	Gm23063	ENSMUST00000102350	miRNA		19	-1	17892051	93
ENSMUSG00000077711	snoRNA	AF357399	ENSMUST00000104523	snoRNA		7	1	28351508	125
ENSMUSG00000084666	misc_RNA	Gm23211	ENSMUST00000122717	misc_RNA		11	1	83844665	308
ENSMUSG00000077558	snoRNA	Gm23705	ENSMUST00000104370	snoRNA		X	-1	42681886	130
ENSMUSG00000076333	miRNA	Mir599	ENSMUST00000102378	miRNA		15	-1	35660918	88
ENSMUSG00000065628	snoRNA	Snord33	ENSMUST00000083694	snoRNA		7	-1	45126947	84
ENSMUSG00000084737	snRNA	Gm25805	ENSMUST00000122788	snRNA		16	-1	8766276	108
ENSMUSG00000106418	miRNA	Gm44397	ENSMUST00000195950	miRNA		17	-1	56172125	113
ENSMUSG00000077131	miRNA	Gm23578	ENSMUST00000103943	miRNA		2	1	10468069	104
ENSMUSG00000077488	snoRNA	Gm25276	ENSMUST00000104300	snoRNA		16	-1	13531551	124
ENSMUSG00000099196	miRNA	Mir1258	ENSMUST00000183892	miRNA		18	1	56538139	60
ENSMUSG00000096784	miRNA	Gm24643	ENSMUST00000178305	miRNA		15	-1	89889052	101
ENSMUSG00000077196	snoRNA	Gm22267	ENSMUST00000104008	snoRNA		6	-1	24894800	131
ENSMUSG00000089175	scaRNA	Gm22433	ENSMUST00000158550	scaRNA		3	1	63152217	142
ENSMUSG00000070099	miRNA	Mir466	ENSMUST00000093591	miRNA		2	1	10507918	73
ENSMUSG00000093280	miRNA	Mir2861	ENSMUST00000175539	miRNA		2	-1	32712888	82
ENSMUSG00000089447	snoRNA	Gm22532	ENSMUST00000158822	snoRNA		8	-1	73175258	140
ENSMUSG00000093034	miRNA	Gm23633	ENSMUST00000175293	miRNA		14	-1	27380850	119
ENSMUSG00000088372	snoRNA	Gm22881	ENSMUST00000157747	snoRNA		6	1	135148648	134
ENSMUSG00000065340	snRNA	Gm25578	ENSMUST00000083406	snRNA		1	1	124490856	104
ENSMUSG00000087936	snoRNA	Gm23675	ENSMUST00000157311	snoRNA		3	1	53512002	125
ENSMUSG00000098594	miRNA	Gm27628	ENSMUST00000184911	miRNA		8	1	71119342	107
ENSMUSG00000088318	snRNA	Gm26187	ENSMUST00000157693	snRNA		1	1	87251148	101
ENSMUSG00000076014	miRNA	Mir669a-2	ENSMUST00000102060	miRNA		2	1	10510164	97
ENSMUSG00000106463	miRNA	Mir1291	ENSMUST00000199842	miRNA		15	-1	98519878	117
ENSMUSG00000088383	ribozyme	Gm24687	ENSMUST00000157758	ribozyme		X	1	152868620	241
ENSMUSG00000065005	rRNA	n-R5s79	ENSMUST00000083071	rRNA		10	-1	88710127	120
ENSMUSG00000098618	miRNA	Gm27299	ENSMUST00000184593	miRNA		12	1	110674100	103
ENSMUSG00000076456	miRNA	Mir760	ENSMUST00000103257	miRNA		3	-1	122293703	119
ENSMUSG00000098979	misc_RNA	Gm27544	ENSMUST00000185069	misc_RNA		10	-1	92071815	155
ENSMUSG00000099042	miRNA	Mir7066	ENSMUST00000184696	miRNA		8	-1	70102586	63
ENSMUSG00000097078	protein_coding	Gm26566	ENSMUST00000181601	protein_coding	principal1	4	1	88721805	1038
ENSMUSG00000105723	miRNA	Mir7210	ENSMUST00000199094	miRNA		14	1	24088877	54
ENSMUSG00000096390	snoRNA	Gm23687	ENSMUST00000178664	snoRNA		7	-1	59439969	79
ENSMUSG00000089218	snRNA	Gm23384	ENSMUST00000158593	snRNA		4	-1	17560019	103
ENSMUSG00000105496	miRNA	Mir7004	ENSMUST00000200215	miRNA		2	-1	168640759	64
ENSMUSG00000078035	miRNA	Mir293	ENSMUST00000104841	miRNA		7	1	3220343	80
ENSMUSG00000065479	miRNA	Mir125a	ENSMUST00000083545	miRNA		17	1	17830812	68
ENSMUSG00000077611	snoRNA	Gm23946	ENSMUST00000104423	snoRNA		14	-1	32192050	197
ENSMUSG00000065771	rRNA	n-R5s54	ENSMUST00000083837	rRNA		13	-1	52964732	112
ENSMUSG00000076066	miRNA	Mir223	ENSMUST00000102112	miRNA		X	1	96242817	110
ENSMUSG00000087929	snoRNA	Gm23234	ENSMUST00000157304	snoRNA		6	-1	100494814	134
ENSMUSG00000088337	snRNA	Gm22845	ENSMUST00000157712	snRNA		12	-1	9865450	104
ENSMUSG00000077647	snoRNA	Gm24981	ENSMUST00000104459	snoRNA		14	1	67566850	132
ENSMUSG00000088233	snoRNA	Gm25428	ENSMUST00000157608	snoRNA		8	1	123471384	114
ENSMUSG00000077595	snoRNA	Gm26019	ENSMUST00000104407	snoRNA		16	-1	58751596	119
ENSMUSG00000064778	snoRNA	Snord59a	ENSMUST00000082844	snoRNA		10	1	128084143	74
ENSMUSG00000088027	snoRNA	Gm22144	ENSMUST00000157402	snoRNA		19	1	23643409	102
ENSMUSG00000105029	miRNA	Gm44363	ENSMUST00000196064	miRNA		5	1	22739019	93
ENSMUSG00000088170	misc_RNA	Gm25219	ENSMUST00000157545	misc_RNA		5	-1	23487723	330
ENSMUSG00000088522	snoRNA	Gm26090	ENSMUST00000157897	snoRNA		3	-1	130871076	128
ENSMUSG00000088160	snRNA	Gm23538	ENSMUST00000157535	snRNA		14	-1	100760268	101
ENSMUSG00000065394	miRNA	Mir25	ENSMUST00000083460	miRNA		5	-1	138165404	84
ENSMUSG00000065725	snoRNA	Gm26165	ENSMUST00000083791	snoRNA		2	-1	144261726	138
ENSMUSG00000098325	miRNA	Mir7048	ENSMUST00000184632	miRNA		7	-1	25217725	58
ENSMUSG00000098706	miRNA	Mir6979	ENSMUST00000183927	miRNA		18	-1	37854660	56
ENSMUSG00000093291	miRNA	Mir299b	ENSMUST00000175550	miRNA		12	-1	109710693	49
ENSMUSG00000077192	snoRNA	Snora17	ENSMUST00000104004	snoRNA		2	-1	26639321	132
ENSMUSG00000080359	miRNA	Gm26250	ENSMUST00000116709	miRNA		4	-1	13267050	66
ENSMUSG00000064398	snRNA	Gm23628	ENSMUST00000082464	snRNA		X	-1	20614695	173
ENSMUSG00000092909	miRNA	Gm25732	ENSMUST00000175168	miRNA		4	1	139338206	60
ENSMUSG00000088924	snoRNA	Gm24298	ENSMUST00000158299	snoRNA		10	1	120605537	60
ENSMUSG00000088611	misc_RNA	Gm22483	ENSMUST00000157986	misc_RNA		18	1	40963279	274
ENSMUSG00000077493	snoRNA	Snord91a	ENSMUST00000104305	snoRNA		11	1	74905424	93
ENSMUSG00000077738	snoRNA	Gm23607	ENSMUST00000104550	snoRNA		4	1	39295463	126
ENSMUSG00000088554	misc_RNA	Gm22097	ENSMUST00000157929	misc_RNA		10	-1	109090275	278
ENSMUSG00000065165	snRNA	Gm23815	ENSMUST00000083231	snRNA		7	-1	69498685	107
ENSMUSG00000070138	miRNA	Mir452	ENSMUST00000093629	miRNA		X	-1	72262308	85
ENSMUSG00000099219	misc_RNA	Gm27680	ENSMUST00000184192	misc_RNA		5	-1	111330632	160
ENSMUSG00000064755	snRNA	Gm26328	ENSMUST00000082821	snRNA		14	1	52342777	107
ENSMUSG00000078024	miRNA	Mir883b	ENSMUST00000104830	miRNA		X	-1	66789967	78
ENSMUSG00000094702	miRNA	Gm24485	ENSMUST00000178283	miRNA		10	1	129733232	67
ENSMUSG00000077110	miRNA	Gm22427	ENSMUST00000103922	miRNA		7	1	47752722	110
ENSMUSG00000093129	miRNA	Gm24368	ENSMUST00000175388	miRNA		5	1	69340783	106
ENSMUSG00000065943	snRNA	Gm23794	ENSMUST00000084009	snRNA		X	1	162114238	104
ENSMUSG00000093238	miRNA	Mir9-3	ENSMUST00000175497	miRNA		7	1	79505264	90
ENSMUSG00000089497	snRNA	Gm26360	ENSMUST00000158872	snRNA		9	-1	103526919	103
ENSMUSG00000098574	miRNA	Mir7037	ENSMUST00000184414	miRNA		5	-1	139767943	65
ENSMUSG00000065572	miRNA	Mir130b	ENSMUST00000083638	miRNA		16	-1	17124142	82
ENSMUSG00000098656	miRNA	Mir7028	ENSMUST00000185016	miRNA		5	1	114719515	64
ENSMUSG00000094824	snoRNA	Gm23803	ENSMUST00000104610	snoRNA		10	-1	59817797	132
ENSMUSG00000080498	miRNA	Gm26302	ENSMUST00000116848	miRNA		X	1	26229981	86
ENSMUSG00000106412	miRNA	Gm44460	ENSMUST00000196179	miRNA		15	1	101570183	129
ENSMUSG00000092752	miRNA	Mir3473a	ENSMUST00000175011	miRNA		X	-1	162874995	78
ENSMUSG00000065747	snRNA	Gm25006	ENSMUST00000083813	snRNA		X	1	88192617	107
ENSMUSG00000093994	snoRNA	Gm26498	ENSMUST00000177799	snoRNA		7	-1	59386159	79
ENSMUSG00000077553	snoRNA	Gm23176	ENSMUST00000104365	snoRNA		9	-1	88021549	130
ENSMUSG00000095749	rRNA	n-R5s141	ENSMUST00000178066	rRNA		8	-1	123608438	119
ENSMUSG00000099283	miRNA	Mir6912	ENSMUST00000184456	miRNA		10	1	80609260	70
ENSMUSG00000098497	miRNA	Mir6932	ENSMUST00000185044	miRNA		11	1	107637722	58
ENSMUSG00000094411	snoRNA	Snord16a	ENSMUST00000083895	snoRNA		9	1	64175423	99
ENSMUSG00000084484	snRNA	Gm23788	ENSMUST00000122535	snRNA		7	-1	123942209	106
ENSMUSG00000094663	snRNA	Gm25626	ENSMUST00000177631	snRNA		10	1	41387900	107
ENSMUSG00000065070	rRNA	n-R5s196	ENSMUST00000083136	rRNA		3	1	51828912	117
ENSMUSG00000077707	snoRNA	Gm24070	ENSMUST00000104519	snoRNA		12	-1	77814809	130
ENSMUSG00000080499	snRNA	Gm25338	ENSMUST00000116849	snRNA		2	-1	48384338	120
ENSMUSG00000084688	rRNA	n-R5s43	ENSMUST00000122739	rRNA		15	1	100449684	110
ENSMUSG00000064727	snoRNA	Gm25853	ENSMUST00000082793	snoRNA		16	1	54354462	132
ENSMUSG00000088075	rRNA	Gm22816	ENSMUST00000157450	rRNA		5	1	90893380	117
ENSMUSG00000106670	miRNA	Gm44347	ENSMUST00000199602	miRNA		8	1	14350178	108
ENSMUSG00000070078	miRNA	Mir463	ENSMUST00000093570	miRNA		X	-1	66799297	75
ENSMUSG00000095942	miRNA	Gm25198	ENSMUST00000178574	miRNA		1	1	88015924	110
ENSMUSG00000088863	snRNA	Gm23067	ENSMUST00000158238	snRNA		5	-1	70186846	62
ENSMUSG00000094270	rRNA	Gm22291	ENSMUST00000178027	rRNA		8	-1	123618654	119
ENSMUSG00000077081	miRNA	Gm23701	ENSMUST00000103893	miRNA		14	-1	25828105	110
ENSMUSG00000098493	miRNA	Mir6383	ENSMUST00000184545	miRNA		X	1	136183245	116
ENSMUSG00000065524	miRNA	Mir135a-2	ENSMUST00000083590	miRNA		10	-1	92072185	100
ENSMUSG00000077485	snoRNA	Gm25275	ENSMUST00000104297	snoRNA		8	-1	66918778	129
ENSMUSG00000099299	miRNA	Gm27722	ENSMUST00000183908	miRNA		12	-1	115499094	76
ENSMUSG00000095740	snRNA	Gm22474	ENSMUST00000179407	snRNA		17	-1	46232831	107
ENSMUSG00000096683	snoRNA	Gm25988	ENSMUST00000177759	snoRNA		7	-1	59428743	79
ENSMUSG00000080671	miRNA	Gm23335	ENSMUST00000117021	miRNA		18	-1	55966941	90
ENSMUSG00000094255	snRNA	Gm25633	ENSMUST00000178565	snRNA		9	-1	49825975	107
ENSMUSG00000088905	snoRNA	Gm25439	ENSMUST00000158280	snoRNA		9	1	33917492	131
ENSMUSG00000105131	miRNA	Gm47306	ENSMUST00000197243	miRNA		8	1	110498985	60
ENSMUSG00000092673	miRNA	Mir3067	ENSMUST00000174932	miRNA		12	1	81166151	84
ENSMUSG00000094937	rRNA	Gm23770	ENSMUST00000178009	rRNA		Y	-1	85774549	108
ENSMUSG00000093355	snoRNA	Snora26	ENSMUST00000175614	snoRNA		5	1	74093530	121
ENSMUSG00000089322	snoRNA	Gm25977	ENSMUST00000158697	snoRNA		4	1	21328520	85
ENSMUSG00000064515	rRNA	n-R5s162	ENSMUST00000082581	rRNA		6	1	60250792	119
ENSMUSG00000077125	miRNA	Gm26399	ENSMUST00000103937	miRNA		8	1	97255841	110
ENSMUSG00000065441	miRNA	Mir128-2	ENSMUST00000083507	miRNA		9	-1	112118711	76
ENSMUSG00000064588	rRNA	n-R5s74	ENSMUST00000082654	rRNA		11	-1	116326717	116
ENSMUSG00000077802	rRNA	n-R5s52	ENSMUST00000104614	rRNA		13	-1	14118855	113
ENSMUSG00000089558	rRNA	Gm24174	ENSMUST00000158933	rRNA		6	-1	140166645	111
ENSMUSG00000098969	misc_RNA	Gm27695	ENSMUST00000184301	misc_RNA		6	1	52246718	91
ENSMUSG00000089590	snRNA	Gm26160	ENSMUST00000158965	snRNA		6	1	129174820	63
ENSMUSG00000096182	snRNA	Gm23308	ENSMUST00000179475	snRNA		13	1	119813233	107
ENSMUSG00000098878	snRNA	Gm27964	ENSMUST00000185195	snRNA		8	1	53493763	62
ENSMUSG00000088354	miRNA	Gm27592	ENSMUST00000157729	miRNA		7	-1	24336465	126
ENSMUSG00000089094	rRNA	Gm25659	ENSMUST00000158469	rRNA		19	1	50812324	37
ENSMUSG00000098265	misc_RNA	Gm27517	ENSMUST00000184347	misc_RNA		11	-1	3645521	236
ENSMUSG00000080627	miRNA	Gm22677	ENSMUST00000116977	miRNA		2	1	10465760	108
ENSMUSG00000077197	snoRNA	Gm22268	ENSMUST00000104009	snoRNA		16	-1	76132671	131
ENSMUSG00000064781	snRNA	Gm22686	ENSMUST00000082847	snRNA		X	1	82187682	100
ENSMUSG00000087793	snoRNA	Gm25967	ENSMUST00000157168	snoRNA		16	-1	35722233	147
ENSMUSG00000089508	rRNA	Gm23473	ENSMUST00000158883	rRNA		11	1	85778812	116
ENSMUSG00000077524	rRNA	n-R5s67	ENSMUST00000104336	rRNA		11	1	6273311	114
ENSMUSG00000092723	miRNA	Gm24804	ENSMUST00000174982	miRNA		4	1	107434572	85
ENSMUSG00000064845	snRNA	Gm26203	ENSMUST00000082911	snRNA		1	-1	191772834	114
ENSMUSG00000098809	miRNA	Gm27471	ENSMUST00000183571	miRNA		17	-1	34770645	67
ENSMUSG00000077939	miRNA	Gm24133	ENSMUST00000104746	miRNA		1	1	36663965	75
ENSMUSG00000065173	snRNA	Gm22127	ENSMUST00000083239	snRNA		11	1	36722882	106
ENSMUSG00000088996	snoRNA	Gm22765	ENSMUST00000158371	snoRNA		18	1	9614314	128
ENSMUSG00000095635	snRNA	Gm22951	ENSMUST00000179471	snRNA		15	-1	99368135	107
ENSMUSG00000064806	snRNA	Gm24038	ENSMUST00000082872	snRNA		X	1	48230286	159
ENSMUSG00000098695	miRNA	Gm27618	ENSMUST00000183671	miRNA		15	-1	82782141	60
ENSMUSG00000088248	miRNA	Mir1969	ENSMUST00000157623	miRNA		8	1	70925525	94
ENSMUSG00000092981	miRNA	Mir5125	ENSMUST00000175240	miRNA		17	1	23823291	79
ENSMUSG00000077180	snoRNA	Gm25094	ENSMUST00000103992	snoRNA		6	-1	93335588	131
ENSMUSG00000077616	snoRNA	Gm25502	ENSMUST00000104428	snoRNA		1	1	59070988	131
ENSMUSG00000089586	rRNA	Gm25348	ENSMUST00000158961	rRNA		17	-1	63097000	111
ENSMUSG00000089481	rRNA	Gm24738	ENSMUST00000158856	rRNA		5	-1	76006441	123
ENSMUSG00000089018	snRNA	Gm25521	ENSMUST00000158393	snRNA		5	-1	93013139	108
ENSMUSG00000087858	snoRNA	Gm22795	ENSMUST00000157233	snoRNA		3	-1	10975586	118
ENSMUSG00000084714	snRNA	Gm24631	ENSMUST00000122765	snRNA		9	1	106001718	81
ENSMUSG00000088671	rRNA	Gm23662	ENSMUST00000158046	rRNA		7	1	113119698	111
ENSMUSG00000089161	snoRNA	Gm24130	ENSMUST00000158536	snoRNA		13	1	65158258	151
ENSMUSG00000099214	miRNA	Mir6365	ENSMUST00000183990	miRNA		16	-1	13471180	101
ENSMUSG00000087812	snRNA	Gm25115	ENSMUST00000157187	snRNA		14	1	86408522	140
ENSMUSG00000093363	miRNA	Gm22002	ENSMUST00000175622	miRNA		2	1	105992757	125
ENSMUSG00000093354	miRNA	Mir125b-1	ENSMUST00000175613	miRNA		9	1	41581926	77
ENSMUSG00000065418	miRNA	Mir322	ENSMUST00000083484	miRNA		X	-1	53054349	95
ENSMUSG00000077643	snoRNA	Gm24985	ENSMUST00000104455	snoRNA		6	1	13111299	129
ENSMUSG00000089184	snoRNA	Gm22947	ENSMUST00000158559	snoRNA		11	-1	78561735	91
ENSMUSG00000080582	snoRNA	Gm24907	ENSMUST00000116932	snoRNA		X	-1	150807986	128
ENSMUSG00000093269	miRNA	Mir5124a	ENSMUST00000175528	miRNA		13	1	40865791	72
ENSMUSG00000095031	snoRNA	Gm22348	ENSMUST00000178674	snoRNA		7	-1	59405408	79
ENSMUSG00000096208	snRNA	Gm22070	ENSMUST00000178475	snRNA		10	1	114991541	107
ENSMUSG00000093158	miRNA	Gm25036	ENSMUST00000175417	miRNA		18	1	47154373	50
ENSMUSG00000093092	miRNA	Gm22643	ENSMUST00000175351	miRNA		9	1	13621226	101
ENSMUSG00000106468	miRNA	Gm47282	ENSMUST00000195971	miRNA		7	1	110802481	107
ENSMUSG00000065231	snoRNA	Gm22972	ENSMUST00000083297	snoRNA		8	-1	105988631	131
ENSMUSG00000088654	snoRNA	Gm24850	ENSMUST00000158029	snoRNA		11	-1	27087135	119
ENSMUSG00000065483	miRNA	Mir181c	ENSMUST00000083549	miRNA		8	-1	84178961	89
ENSMUSG00000076312	miRNA	Mir499	ENSMUST00000102357	miRNA		2	1	155622880	79
ENSMUSG00000064460	snRNA	Gm25080	ENSMUST00000082526	snRNA		3	1	137715658	107
ENSMUSG00000088477	snoRNA	Gm23082	ENSMUST00000157852	snoRNA		X	-1	7547480	133
ENSMUSG00000089363	rRNA	Gm23821	ENSMUST00000158738	rRNA		1	1	186123201	106
ENSMUSG00000064507	rRNA	n-R5s94	ENSMUST00000082573	rRNA		8	-1	5333113	119
ENSMUSG00000092734	miRNA	Mir5100	ENSMUST00000174993	miRNA		11	1	60728663	64
ENSMUSG00000064443	snRNA	Gm26226	ENSMUST00000082509	snRNA		4	1	140918684	116
ENSMUSG00000089312	misc_RNA	Gm22257	ENSMUST00000158687	misc_RNA		X	1	162687880	301
ENSMUSG00000065084	snRNA	Gm26496	ENSMUST00000083150	snRNA		2	-1	126110014	107
ENSMUSG00000095091	snoRNA	Gm23660	ENSMUST00000178362	snoRNA		7	-1	59388031	79
ENSMUSG00000047189	pseudogene	Gm9818	ENSMUST00000050900	pseudogene		17	1	21808186	255
ENSMUSG00000093802	snoRNA	Gm23619	ENSMUST00000178411	snoRNA		7	-1	59804564	94
ENSMUSG00000105569	miRNA	Gm44450	ENSMUST00000199528	miRNA		8	-1	83929556	114
ENSMUSG00000105200	miRNA	Mir378a	ENSMUST00000198300	miRNA		18	-1	61397900	66
ENSMUSG00000088580	rRNA	Gm22968	ENSMUST00000157955	rRNA		8	1	127597706	118
ENSMUSG00000106021	miRNA	Gm44316	ENSMUST00000199274	miRNA		9	1	28292748	97
ENSMUSG00000084466	snRNA	Gm22960	ENSMUST00000122517	snRNA		13	1	46902589	104
ENSMUSG00000076392	miRNA	Gm25992	ENSMUST00000102437	miRNA		8	1	56561301	109
ENSMUSG00000089392	rRNA	Gm23023	ENSMUST00000158767	rRNA		10	-1	3934877	109
ENSMUSG00000096605	snoRNA	Gm26200	ENSMUST00000180273	snoRNA		7	-1	59479425	79
ENSMUSG00000104755	miRNA	Mir677	ENSMUST00000197076	miRNA		10	1	128085286	78
ENSMUSG00000088099	misc_RNA	Gm23673	ENSMUST00000157474	misc_RNA		3	1	124848589	298
ENSMUSG00000064492	snRNA	Gm22060	ENSMUST00000082558	snRNA		9	-1	32446928	107
ENSMUSG00000080401	miRNA	Gm23653	ENSMUST00000116751	miRNA		9	-1	48507060	97
ENSMUSG00000106179	miRNA	Gm47300	ENSMUST00000198372	miRNA		11	-1	75318608	121
ENSMUSG00000095542	snoRNA	Gm24618	ENSMUST00000177718	snoRNA		7	-1	59746518	94
ENSMUSG00000084460	snoRNA	Gm22957	ENSMUST00000122511	snoRNA		2	1	97117414	123
ENSMUSG00000088983	miRNA	Mir1952	ENSMUST00000158358	miRNA		2	1	138819929	79
ENSMUSG00000065739	snoRNA	Gm24493	ENSMUST00000083805	snoRNA		X	-1	37632347	143
ENSMUSG00000076258	miRNA	Gm23935	ENSMUST00000102303	miRNA		16	1	11144125	57
ENSMUSG00000098833	miRNA	Mir6349	ENSMUST00000184059	miRNA		1	-1	39186992	97
ENSMUSG00000095446	snRNA	Gm25730	ENSMUST00000178753	snRNA		17	-1	13399206	165
ENSMUSG00000092647	miRNA	Gm22234	ENSMUST00000174906	miRNA		12	-1	109319516	65
ENSMUSG00000098578	snRNA	Gm27449	ENSMUST00000184570	snRNA		2	1	133330924	59
ENSMUSG00000079016	protein_coding	Gm11034	ENSMUST00000109987	protein_coding	principal1	8	-1	72213636	90
ENSMUSG00000092802	miRNA	Gm26460	ENSMUST00000175061	miRNA		19	1	6563780	126
ENSMUSG00000065246	snRNA	Gm22297	ENSMUST00000083312	snRNA		11	-1	70996644	106
ENSMUSG00000065936	snRNA	Gm25628	ENSMUST00000084002	snRNA		15	1	64025948	105
ENSMUSG00000073492	protein_coding	Gm10521	ENSMUST00000097466	protein_coding	principal1	1	1	171895664	2574
ENSMUSG00000089619	misc_RNA	Gm23777	ENSMUST00000158994	misc_RNA		10	1	124455059	259
ENSMUSG00000098664	misc_RNA	Gm27588	ENSMUST00000185096	misc_RNA		10	-1	92101927	263
ENSMUSG00000076041	miRNA	Mir20b	ENSMUST00000102087	miRNA		X	-1	52742192	80
ENSMUSG00000077409	snRNA	Gm25416	ENSMUST00000104221	snRNA		7	-1	142078437	107
ENSMUSG00000096181	snRNA	Gm23307	ENSMUST00000179167	snRNA		7	1	39283976	105
ENSMUSG00000080396	snoRNA	Snord111	ENSMUST00000116746	snoRNA		8	-1	110838616	89
ENSMUSG00000052779	pseudogene	4833418N17Rik	ENSMUST00000064826	pseudogene		7	1	81992002	615
ENSMUSG00000064476	snRNA	Gm23405	ENSMUST00000082542	snRNA		4	1	150964735	160
ENSMUSG00000084443	rRNA	n-R5s214	ENSMUST00000122494	rRNA		1	-1	83216791	121
ENSMUSG00000099228	miRNA	Gm28018	ENSMUST00000103869	miRNA		Y	1	40688738	110
ENSMUSG00000089228	snRNA	Gm25044	ENSMUST00000158603	snRNA		10	1	80476352	104
ENSMUSG00000065410	miRNA	Mir298	ENSMUST00000083476	miRNA		2	-1	174267585	82
ENSMUSG00000095977	snoRNA	Gm23513	ENSMUST00000158181	snoRNA		16	-1	52105147	133
ENSMUSG00000077737	snoRNA	Snord72	ENSMUST00000104549	snoRNA		15	1	5118404	81
ENSMUSG00000098326	misc_RNA	Dlx6os1	ENSMUST00000184182	misc_RNA		6	-1	6871633	146
ENSMUSG00000084621	snRNA	Gm25106	ENSMUST00000122672	snRNA		11	-1	98473808	134
ENSMUSG00000094139	snRNA	Gm22263	ENSMUST00000180060	snRNA		16	1	36419087	104
ENSMUSG00000088125	snoRNA	Gm26070	ENSMUST00000157500	snoRNA		11	1	35214401	137
ENSMUSG00000064728	snRNA	Gm25851	ENSMUST00000082794	snRNA		X	-1	58358058	107
ENSMUSG00000065198	snRNA	Gm23462	ENSMUST00000083264	snRNA		6	-1	149074106	104
ENSMUSG00000094976	snRNA	Gm25257	ENSMUST00000083907	snRNA		X	1	154979339	110
ENSMUSG00000077574	snRNA	Gm24887	ENSMUST00000104386	snRNA		11	-1	79639128	108
ENSMUSG00000079764	pseudogene	AC087559.1	ENSMUST00000115902	pseudogene		GL456350.1	-1	27953	1386
ENSMUSG00000070126	miRNA	Mir199a-2	ENSMUST00000093618	miRNA		1	1	162217814	110
ENSMUSG00000088722	snRNA	Gm22211	ENSMUST00000158097	snRNA		7	-1	52075579	156
ENSMUSG00000096191	snoRNA	Gm26135	ENSMUST00000101993	snoRNA		9	-1	88857764	72
ENSMUSG00000093997	snoRNA	Gm26499	ENSMUST00000178544	snoRNA		7	-1	59377660	79
ENSMUSG00000084633	misc_RNA	Gm23886	ENSMUST00000122684	misc_RNA		8	-1	3729237	313
ENSMUSG00000095676	snRNA	Gm25099	ENSMUST00000093716	snRNA		4	1	117189942	116
ENSMUSG00000098522	miRNA	Mir6412	ENSMUST00000184477	miRNA		10	1	122648339	97
ENSMUSG00000077832	miRNA	Gm26051	ENSMUST00000104642	miRNA		5	-1	25168464	93
ENSMUSG00000093241	miRNA	Mir3108	ENSMUST00000175500	miRNA		8	1	108936860	79
ENSMUSG00000084523	miRNA	Mir1903	ENSMUST00000122574	miRNA		8	1	128359241	80
ENSMUSG00000094407	snoRNA	Gm23141	ENSMUST00000178682	snoRNA		7	-1	59706061	94
ENSMUSG00000058281	pseudogene	Gm10038	ENSMUST00000077233	pseudogene		2	1	103099155	441
ENSMUSG00000098749	misc_RNA	Gm27477	ENSMUST00000184649	misc_RNA		6	1	52162125	143
ENSMUSG00000077716	snoRNA	Gm25725	ENSMUST00000104528	snoRNA		7	-1	141386624	130
ENSMUSG00000076037	miRNA	Gm22752	ENSMUST00000102083	miRNA		3	-1	93433305	109
ENSMUSG00000096095	snoRNA	Gm26332	ENSMUST00000179813	snoRNA		7	-1	59738941	94
ENSMUSG00000077241	snoRNA	Gm23272	ENSMUST00000104053	snoRNA		6	-1	143465397	129
ENSMUSG00000088816	scaRNA	Gm22387	ENSMUST00000158191	scaRNA		11	-1	86997263	131
ENSMUSG00000077698	snoRNA	Snord12	ENSMUST00000104510	snoRNA		2	1	167065276	90
ENSMUSG00000076042	miRNA	Mir710	ENSMUST00000102088	miRNA		8	-1	64514441	110
ENSMUSG00000089138	snRNA	Gm24773	ENSMUST00000158513	snRNA		16	1	80685225	99
ENSMUSG00000087967	snoRNA	Gm25391	ENSMUST00000157342	snoRNA		4	1	62939341	134
ENSMUSG00000098498	miRNA	Mir8099-1	ENSMUST00000184238	miRNA		3	-1	95139186	127
ENSMUSG00000089259	rRNA	Gm25712	ENSMUST00000158634	rRNA		7	-1	96863379	93
ENSMUSG00000089461	snoRNA	Gm23698	ENSMUST00000158836	snoRNA		10	1	110796173	128
ENSMUSG00000095796	snoRNA	Gm26297	ENSMUST00000179464	snoRNA		16	1	46219836	132
ENSMUSG00000088335	snoRNA	Gm22843	ENSMUST00000157710	snoRNA		X	-1	78550879	134
ENSMUSG00000087911	snRNA	Gm24913	ENSMUST00000157286	snRNA		4	-1	132931317	107
ENSMUSG00000065083	rRNA	n-R5s205	ENSMUST00000083149	rRNA		2	-1	120640835	125
ENSMUSG00000099086	miRNA	Gm27622	ENSMUST00000183779	miRNA		15	1	82452421	60
ENSMUSG00000088603	snRNA	Gm24192	ENSMUST00000157978	snRNA		11	1	39830656	145
ENSMUSG00000077755	snoRNA	Gm23531	ENSMUST00000104567	snoRNA		8	-1	42522203	68
ENSMUSG00000074837	protein_coding	Gm10770	ENSMUST00000099418	protein_coding	principal1	2	-1	150179679	714
ENSMUSG00000088152	snRNA	Gm25572	ENSMUST00000157527	snRNA		3	-1	58979026	172
ENSMUSG00000098604	snoRNA	Gm27295	ENSMUST00000184264	snoRNA		16	1	85168849	153
ENSMUSG00000077714	snoRNA	Snord17	ENSMUST00000104526	snoRNA		2	-1	144266216	238
ENSMUSG00000098431	miRNA	Mir7666	ENSMUST00000183849	miRNA		8	-1	40307929	55
ENSMUSG00000065282	snoRNA	Gm24455	ENSMUST00000083348	snoRNA		9	1	15313802	131
ENSMUSG00000105220	miRNA	Mir497	ENSMUST00000200557	miRNA		11	1	70234717	84
ENSMUSG00000105839	miRNA	Gm44456	ENSMUST00000196554	miRNA		13	-1	21925016	89
ENSMUSG00000077406	snRNA	Gm25421	ENSMUST00000104218	snRNA		X	-1	75578971	164
ENSMUSG00000098338	miRNA	Mir6941	ENSMUST00000184711	miRNA		12	-1	112920541	59
ENSMUSG00000099226	miRNA	Mir7091	ENSMUST00000184075	miRNA		X	-1	74274105	79
ENSMUSG00000080666	miRNA	Gm25000	ENSMUST00000117016	miRNA		13	-1	60529409	114
ENSMUSG00000088647	snRNA	Gm26487	ENSMUST00000158022	snRNA		X	1	59190773	94
ENSMUSG00000096895	snRNA	Gm25245	ENSMUST00000178139	snRNA		16	-1	91921415	107
ENSMUSG00000105754	snoRNA	Gm23604	ENSMUST00000198428	snoRNA		8	-1	45581751	137
ENSMUSG00000089279	snoRNA	Gm24554	ENSMUST00000158654	snoRNA		15	-1	30004134	73
ENSMUSG00000088666	rRNA	Gm25329	ENSMUST00000158041	rRNA		1	1	73763710	126
ENSMUSG00000088254	scaRNA	Gm24289	ENSMUST00000157629	scaRNA		9	1	64295931	135
ENSMUSG00000077001	miRNA	Mir544	ENSMUST00000103813	miRNA		12	1	109729325	78
ENSMUSG00000077015	miRNA	Gm22190	ENSMUST00000103827	miRNA		6	1	131532922	110
ENSMUSG00000089317	snoRNA	Snord123	ENSMUST00000158692	snoRNA		15	-1	32241923	71
ENSMUSG00000093192	miRNA	Gm22877	ENSMUST00000175451	miRNA		14	-1	103650557	105
ENSMUSG00000089143	snRNA	Gm25268	ENSMUST00000158518	snRNA		19	-1	37233484	103
ENSMUSG00000065347	snRNA	Gm25583	ENSMUST00000083413	snRNA		2	1	141640490	107
ENSMUSG00000080566	snRNA	Gm26044	ENSMUST00000116916	snRNA		5	-1	69752528	126
ENSMUSG00000098553	miRNA	Mir3569	ENSMUST00000185080	miRNA		7	1	30589380	58
ENSMUSG00000088533	snoRNA	Gm24998	ENSMUST00000157908	snoRNA		14	1	34106156	89
ENSMUSG00000088683	misc_RNA	Gm24858	ENSMUST00000158058	misc_RNA		7	1	75275089	323
ENSMUSG00000084450	snoRNA	Gm24595	ENSMUST00000122501	snoRNA		X	-1	94455119	110
ENSMUSG00000064964	snRNA	Gm25147	ENSMUST00000083030	snRNA		2	1	18158687	105
ENSMUSG00000095186	protein_coding	Gm10718	ENSMUST00000099046	protein_coding	principal1	9	1	3023547	681
ENSMUSG00000077836	miRNA	Gm26052	ENSMUST00000104646	miRNA		11	-1	32984299	84
ENSMUSG00000088706	snRNA	Gm25552	ENSMUST00000158081	snRNA		X	-1	13985475	91
ENSMUSG00000076313	miRNA	Mir665	ENSMUST00000102358	miRNA		12	1	109586314	94
ENSMUSG00000077677	snRNA	Gm24468	ENSMUST00000104489	snRNA		4	1	101186764	104
ENSMUSG00000089111	snoRNA	Gm25907	ENSMUST00000158486	snoRNA		7	1	81965710	125
ENSMUSG00000064694	misc_RNA	Gm24146	ENSMUST00000082760	misc_RNA		5	1	139844930	321
ENSMUSG00000105626	miRNA	Gm44496	ENSMUST00000197346	miRNA		X	1	29646631	85
ENSMUSG00000105884	snoRNA	Gm22711	ENSMUST00000197029	snoRNA		11	1	106501243	135
ENSMUSG00000077703	snoRNA	Gm24066	ENSMUST00000104515	snoRNA		12	1	64736402	131
ENSMUSG00000098802	miRNA	Mir7046	ENSMUST00000183435	miRNA		7	-1	24970075	66
ENSMUSG00000099169	miRNA	Mir7j	ENSMUST00000184427	miRNA		3	1	140028249	122
ENSMUSG00000080558	miRNA	Gm22091	ENSMUST00000116908	miRNA		2	1	10508453	127
ENSMUSG00000089183	snRNA	Gm22946	ENSMUST00000158558	snRNA		6	-1	123195713	82
ENSMUSG00000065552	miRNA	Mir302a	ENSMUST00000083618	miRNA		3	1	127545496	69
ENSMUSG00000095047	miRNA	Gm22852	ENSMUST00000177899	miRNA		15	-1	103853519	101
ENSMUSG00000098487	miRNA	Mir6899	ENSMUST00000184798	miRNA		1	-1	64042501	64
ENSMUSG00000065387	rRNA	n-R5s85	ENSMUST00000083453	rRNA		9	1	65836353	113
ENSMUSG00000077546	snoRNA	Gm22020	ENSMUST00000104358	snoRNA		2	-1	62802624	136
ENSMUSG00000065414	miRNA	Mir138-1	ENSMUST00000083480	miRNA		9	1	122682876	99
ENSMUSG00000088278	snRNA	Gm23121	ENSMUST00000157653	snRNA		X	1	77579487	173
ENSMUSG00000077601	snoRNA	Gm22674	ENSMUST00000104413	snoRNA		13	-1	35293277	131
ENSMUSG00000080410	miRNA	Gm26472	ENSMUST00000116760	miRNA		1	1	122201459	83
ENSMUSG00000095769	protein_coding	Gm21891	ENSMUST00000179284	protein_coding	principal1	Y	-1	13133492	543
ENSMUSG00000094026	snRNA	Gm23002	ENSMUST00000179221	snRNA		6	-1	112593073	107
ENSMUSG00000064436	snRNA	Gm25589	ENSMUST00000082502	snRNA		6	-1	29113606	166
ENSMUSG00000098881	miRNA	Mir6927	ENSMUST00000184494	miRNA		11	1	97677060	71
ENSMUSG00000095911	snoRNA	Gm24528	ENSMUST00000179164	snoRNA		7	-1	59415668	79
ENSMUSG00000099205	snRNA	Gm27944	ENSMUST00000185155	snRNA		6	1	112513447	103
ENSMUSG00000065392	snoRNA	Gm25894	ENSMUST00000083458	snoRNA		19	1	8724251	75
ENSMUSG00000092990	miRNA	Mir466q	ENSMUST00000175249	miRNA		3	1	28419943	76
ENSMUSG00000104848	snoRNA	Gm22149	ENSMUST00000196259	snoRNA		12	-1	82772456	137
ENSMUSG00000077470	snoRNA	Gm24789	ENSMUST00000104282	snoRNA		15	1	39040579	131
ENSMUSG00000095507	snoRNA	Gm22447	ENSMUST00000158155	snoRNA		8	-1	21703266	92
ENSMUSG00000080330	miRNA	Gm22468	ENSMUST00000116680	miRNA		3	1	137621474	120
ENSMUSG00000093919	processed_pseudogene	Gm20760	ENSMUST00000179197	processed_pseudogene		4	1	146932742	648
ENSMUSG00000088209	rRNA	Gm23752	ENSMUST00000157584	rRNA		12	1	5843712	115
ENSMUSG00000064471	snoRNA	Gm23406	ENSMUST00000082537	snoRNA		16	1	90602496	122
ENSMUSG00000077501	snoRNA	Gm24230	ENSMUST00000104313	snoRNA		6	1	54974651	129
ENSMUSG00000094541	rRNA	Gm24089	ENSMUST00000093696	rRNA		8	-1	123601680	109
ENSMUSG00000093902	snRNA	Gm25021	ENSMUST00000179184	snRNA		6	1	17436306	107
ENSMUSG00000087946	misc_RNA	Gm24248	ENSMUST00000157321	misc_RNA		6	-1	99893547	322
ENSMUSG00000096785	rRNA	n-R5s130	ENSMUST00000178128	rRNA		8	-1	123589772	119
ENSMUSG00000095805	snRNA	Gm22092	ENSMUST00000178290	snRNA		4	-1	116922490	107
ENSMUSG00000094129	snoRNA	Gm23944	ENSMUST00000178607	snoRNA		7	-1	59584012	79
ENSMUSG00000065372	snRNA	Gm22741	ENSMUST00000083438	snRNA		16	1	20745308	165
ENSMUSG00000094466	miRNA	Gm24308	ENSMUST00000177773	miRNA		6	-1	137919971	114
ENSMUSG00000098660	miRNA	Mir6336	ENSMUST00000183581	miRNA		2	-1	42447568	130
ENSMUSG00000084745	snoRNA	Gm25290	ENSMUST00000122796	snoRNA		5	1	92193322	144
ENSMUSG00000098883	miRNA	Gm27430	ENSMUST00000184585	miRNA		1	-1	30333397	107
ENSMUSG00000077285	snoRNA	Gm26394	ENSMUST00000104097	snoRNA		11	1	98999508	115
ENSMUSG00000092732	miRNA	Gm24025	ENSMUST00000174991	miRNA		13	-1	76321279	76
ENSMUSG00000046747	pseudogene	Gm9812	ENSMUST00000061934	pseudogene		12	1	55820611	968
ENSMUSG00000089443	snRNA	Gm22528	ENSMUST00000158818	snRNA		X	1	48299579	104
ENSMUSG00000098792	misc_RNA	Gm27401	ENSMUST00000184052	misc_RNA		11	-1	116839966	173
ENSMUSG00000096677	snoRNA	Gm24518	ENSMUST00000180275	snoRNA		7	-1	59728774	94
ENSMUSG00000093170	miRNA	Gm23873	ENSMUST00000175429	miRNA		7	-1	61750537	70
ENSMUSG00000087717	snoRNA	Gm25824	ENSMUST00000157092	snoRNA		18	-1	79553677	121
ENSMUSG00000089298	misc_RNA	Gm24636	ENSMUST00000158673	misc_RNA		4	-1	133171714	288
ENSMUSG00000088482	snRNA	Gm23641	ENSMUST00000157857	snRNA		5	-1	150551807	101
ENSMUSG00000096633	snRNA	Gm22170	ENSMUST00000097247	snRNA		12	-1	13507968	107
ENSMUSG00000092792	miRNA	Gm22694	ENSMUST00000175051	miRNA		18	1	89733005	70
ENSMUSG00000089593	snRNA	Gm26159	ENSMUST00000158968	snRNA		16	1	8336993	104
ENSMUSG00000088211	snRNA	Gm22083	ENSMUST00000157586	snRNA		X	1	8083992	102
ENSMUSG00000098823	miRNA	Mir8111	ENSMUST00000184463	miRNA		8	1	84005628	137
ENSMUSG00000065385	rRNA	n-R5s153	ENSMUST00000083451	rRNA		7	-1	29657276	116
ENSMUSG00000078041	miRNA	Mir292	ENSMUST00000104847	miRNA		7	1	3219189	82
ENSMUSG00000098981	miRNA	Mir7236	ENSMUST00000184435	miRNA		11	-1	121387204	60
ENSMUSG00000065368	snRNA	Gm24414	ENSMUST00000083434	snRNA		7	-1	11967256	107
ENSMUSG00000099259	miRNA	Mir6922	ENSMUST00000185099	miRNA		11	-1	60202327	66
ENSMUSG00000095183	rRNA	n-R5s138	ENSMUST00000179476	rRNA		8	-1	123603365	119
ENSMUSG00000116057	protein_coding	Vmn1r216	ENSMUST00000080253	protein_coding	principal1	13	1	23099071	1059
ENSMUSG00000093013	miRNA	Gm22461	ENSMUST00000175272	miRNA		11	-1	97941740	70
ENSMUSG00000096648	snoRNA	Gm24027	ENSMUST00000177611	snoRNA		7	-1	59460755	79
ENSMUSG00000077571	snoRNA	Snora36b	ENSMUST00000104383	snoRNA		1	1	185242907	132
ENSMUSG00000089560	snRNA	Gm24668	ENSMUST00000158935	snRNA		15	-1	95606665	104
ENSMUSG00000065468	miRNA	Mir26b	ENSMUST00000083534	miRNA		1	1	74394310	85
ENSMUSG00000092702	misc_RNA	Gm24514	ENSMUST00000174961	misc_RNA		18	-1	55622920	285
ENSMUSG00000064761	snoRNA	Gm23514	ENSMUST00000082827	snoRNA		11	1	25685140	130
ENSMUSG00000088304	snRNA	Gm24504	ENSMUST00000157679	snRNA		18	-1	64786428	100
ENSMUSG00000087836	rRNA	Gm23956	ENSMUST00000157211	rRNA		15	1	30590287	119
ENSMUSG00000095132	snRNA	Rnu6	ENSMUST00000178023	snRNA		17	-1	13432139	107
ENSMUSG00000106046	miRNA	Gm44462	ENSMUST00000199696	miRNA		7	1	112713951	129
ENSMUSG00000070104	miRNA	Mir471	ENSMUST00000093596	miRNA		X	-1	66792661	67
ENSMUSG00000084645	misc_RNA	Gm24380	ENSMUST00000122696	misc_RNA		X	-1	139654617	324
ENSMUSG00000095744	snRNA	Gm22476	ENSMUST00000158902	snRNA		13	1	27874089	100
ENSMUSG00000072898	pseudogene	Gm10434	ENSMUST00000101158	pseudogene		11	-1	59208720	471
ENSMUSG00000077258	snoRNA	Gm26082	ENSMUST00000104070	snoRNA		9	-1	88770481	127
ENSMUSG00000095868	snoRNA	Gm23136	ENSMUST00000083425	snoRNA		9	1	64176661	99
ENSMUSG00000094771	snoRNA	Gm23860	ENSMUST00000179446	snoRNA		4	1	7820916	132
ENSMUSG00000094587	snoRNA	Gm26366	ENSMUST00000179533	snoRNA		7	-1	59486896	79
ENSMUSG00000099052	misc_RNA	Gm27793	ENSMUST00000183405	misc_RNA		3	1	59001620	76
ENSMUSG00000088387	snRNA	Gm24691	ENSMUST00000157762	snRNA		6	-1	26460430	140
ENSMUSG00000077652	snRNA	Gm23322	ENSMUST00000104464	snRNA		X	-1	109009847	167
ENSMUSG00000065669	snoRNA	Gm22581	ENSMUST00000083735	snoRNA		3	-1	96724400	136
ENSMUSG00000070258	snRNA	Gm25207	ENSMUST00000093745	snRNA		X	-1	15685391	107
ENSMUSG00000088702	snRNA	Gm25556	ENSMUST00000158077	snRNA		11	-1	106186587	144
ENSMUSG00000088331	misc_RNA	Gm22846	ENSMUST00000157706	misc_RNA		8	-1	94698285	270
ENSMUSG00000074970	pseudogene	Gm10794	ENSMUST00000099624	pseudogene		2	-1	110596637	207
ENSMUSG00000064693	snRNA	Gm24150	ENSMUST00000082759	snRNA		3	1	79196374	104
ENSMUSG00000098904	miRNA	Mir6998	ENSMUST00000183343	miRNA		2	1	31612421	64
ENSMUSG00000088994	misc_RNA	Gm23046	ENSMUST00000158369	misc_RNA		2	1	66602515	284
ENSMUSG00000098405	scaRNA	Gm27414	ENSMUST00000185033	scaRNA		X	1	115398815	381
ENSMUSG00000077351	snoRNA	Gm24350	ENSMUST00000104163	snoRNA		2	1	42809035	133
ENSMUSG00000065291	snRNA	Gm26125	ENSMUST00000083357	snRNA		X	1	74534285	107
ENSMUSG00000076371	miRNA	Gm22368	ENSMUST00000102416	miRNA		X	-1	167028997	109
ENSMUSG00000088000	snRNA	Gm25493	ENSMUST00000157375	snRNA		1	-1	4723379	103
ENSMUSG00000080610	snoRNA	Snord110	ENSMUST00000116960	snoRNA		2	1	130275506	68
ENSMUSG00000065236	rRNA	n-R5s197	ENSMUST00000083302	rRNA		3	1	88906510	119
ENSMUSG00000077348	snoRNA	Gm24665	ENSMUST00000104160	snoRNA		2	1	130086041	129
ENSMUSG00000077420	miRNA	Gm24282	ENSMUST00000104232	miRNA		3	1	51297179	66
ENSMUSG00000094161	protein_coding	Gm21904	ENSMUST00000179522	protein_coding	principal1	Y	-1	17846266	543
ENSMUSG00000088484	snoRNA	Gm23592	ENSMUST00000157859	snoRNA		3	-1	7502020	117
ENSMUSG00000088284	snRNA	Gm23588	ENSMUST00000157659	snRNA		9	1	70517200	99
ENSMUSG00000084458	miRNA	Mir1907	ENSMUST00000122509	miRNA		15	-1	50889114	90
ENSMUSG00000098379	miRNA	Mir6347	ENSMUST00000184939	miRNA		1	1	167290125	101
ENSMUSG00000080434	miRNA	Gm23177	ENSMUST00000116784	miRNA		8	-1	34295976	121
ENSMUSG00000065396	miRNA	Mir99b	ENSMUST00000083462	miRNA		17	1	17830188	70
ENSMUSG00000088735	snoRNA	Gm23897	ENSMUST00000158110	snoRNA		3	-1	64318564	158
ENSMUSG00000099309	miRNA	Mir7085	ENSMUST00000184353	miRNA		9	1	44400423	66
ENSMUSG00000098963	misc_RNA	Gm27699	ENSMUST00000183553	misc_RNA		6	1	6820942	180
ENSMUSG00000093428	miRNA	Gm26318	ENSMUST00000176507	miRNA		X	-1	102255525	96
ENSMUSG00000089369	snRNA	Gm23819	ENSMUST00000158744	snRNA		10	-1	127404392	109
ENSMUSG00000092718	miRNA	Gm22860	ENSMUST00000174977	miRNA		3	-1	108567383	74
ENSMUSG00000064923	snRNA	Gm22042	ENSMUST00000082989	snRNA		4	-1	51812647	165
ENSMUSG00000084641	rRNA	n-R5s21	ENSMUST00000122692	rRNA		19	1	43932316	117
ENSMUSG00000064696	snoRNA	Gm24148	ENSMUST00000082762	snoRNA		1	-1	86352087	80
ENSMUSG00000084437	snRNA	Gm23428	ENSMUST00000122488	snRNA		9	-1	66360742	102
ENSMUSG00000093515	miRNA	Mir1231	ENSMUST00000175639	miRNA		1	-1	135454683	81
ENSMUSG00000092719	miRNA	Gm22859	ENSMUST00000174978	miRNA		2	-1	128925692	122
ENSMUSG00000077240	snoRNA	Gm23271	ENSMUST00000104052	snoRNA		9	1	38511173	124
ENSMUSG00000088374	snoRNA	Gm22882	ENSMUST00000157749	snoRNA		6	-1	116765652	124
ENSMUSG00000095102	rRNA	n-R5s167	ENSMUST00000083227	rRNA		6	1	132591058	121
ENSMUSG00000065811	snRNA	Gm24695	ENSMUST00000083877	snRNA		16	-1	91349784	83
ENSMUSG00000096083	protein_coding	Gm10428	ENSMUST00000178750	protein_coding	principal1	11	1	62753100	399
ENSMUSG00000105847	miRNA	Mir7650	ENSMUST00000200085	miRNA		9	1	15312611	59
ENSMUSG00000088437	snRNA	Gm24198	ENSMUST00000157812	snRNA		11	1	54458162	108
ENSMUSG00000088402	snRNA	Gm25887	ENSMUST00000157777	snRNA		14	-1	55683917	84
ENSMUSG00000077696	rRNA	n-R5s172	ENSMUST00000104508	rRNA		5	-1	53346372	114
ENSMUSG00000064467	rRNA	n-R5s37	ENSMUST00000082533	rRNA		16	-1	61373144	118
ENSMUSG00000087860	misc_RNA	Gm24441	ENSMUST00000157235	misc_RNA		13	-1	103421082	281
ENSMUSG00000088324	rRNA	Gm25669	ENSMUST00000157699	rRNA		9	1	102547766	112
ENSMUSG00000089081	snRNA	Gm24002	ENSMUST00000158456	snRNA		4	1	148539127	104
ENSMUSG00000077678	snoRNA	Gm24318	ENSMUST00000104490	snoRNA		2	1	94621958	131
ENSMUSG00000076972	miRNA	Mir193b	ENSMUST00000103784	miRNA		16	1	13449523	79
ENSMUSG00000095738	snRNA	Gm25313	ENSMUST00000101817	snRNA		9	-1	65196687	116
ENSMUSG00000070073	miRNA	Mir470	ENSMUST00000093565	miRNA		X	-1	66814025	75
ENSMUSG00000096163	snRNA	Gm24142	ENSMUST00000101960	snRNA		12	-1	13490615	107
ENSMUSG00000098282	miRNA	Mir6936	ENSMUST00000183547	miRNA		11	-1	120624876	54
ENSMUSG00000089208	rRNA	Gm26216	ENSMUST00000158583	rRNA		17	1	47290956	73
ENSMUSG00000063905	protein_coding	Gm10139	ENSMUST00000081471	protein_coding	principal1	13	1	65512678	171
ENSMUSG00000089358	misc_RNA	Gm25491	ENSMUST00000158733	misc_RNA		1	1	13932378	308
ENSMUSG00000096274	miRNA	Gm24766	ENSMUST00000179182	miRNA		7	1	32690250	121
ENSMUSG00000106281	miRNA	Gm44346	ENSMUST00000198851	miRNA		13	1	21786875	141
ENSMUSG00000104537	miRNA	Gm44303	ENSMUST00000196348	miRNA		5	1	83464794	83
ENSMUSG00000064830	snRNA	Gm25699	ENSMUST00000082896	snRNA		16	-1	73422959	167
ENSMUSG00000065490	miRNA	Mir30c-1	ENSMUST00000083556	miRNA		4	-1	120769622	89
ENSMUSG00000088116	miRNA	Gm24063	ENSMUST00000157491	miRNA		7	1	117776794	105
ENSMUSG00000076303	miRNA	Gm23061	ENSMUST00000102348	miRNA		19	1	17928111	116
ENSMUSG00000080595	snRNA	Gm22031	ENSMUST00000116945	snRNA		15	-1	3603397	126
ENSMUSG00000064726	snoRNA	Gm25854	ENSMUST00000082792	snoRNA		12	1	109686798	72
ENSMUSG00000095884	miRNA	Gm26431	ENSMUST00000180199	miRNA		2	1	10487507	127
ENSMUSG00000092870	miRNA	Mir3061	ENSMUST00000175129	miRNA		11	1	52126746	91
ENSMUSG00000106608	miRNA	Mir466b-1	ENSMUST00000177988	miRNA		2	1	10474219	82
ENSMUSG00000088077	snRNA	Gm22814	ENSMUST00000157452	snRNA		18	-1	33004766	104
ENSMUSG00000065521	miRNA	Mir296	ENSMUST00000083587	miRNA		2	-1	174267125	79
ENSMUSG00000099105	miRNA	Mir7007	ENSMUST00000184606	miRNA		3	-1	20222359	70
ENSMUSG00000093242	miRNA	Gm24574	ENSMUST00000175501	miRNA		2	1	75659244	74
ENSMUSG00000065360	snoRNA	Gm24412	ENSMUST00000083426	snoRNA		7	1	97521808	109
ENSMUSG00000094890	snoRNA	Gm22285	ENSMUST00000178576	snoRNA		7	-1	59678602	94
ENSMUSG00000105844	snoRNA	Gm24350	ENSMUST00000198309	snoRNA		2	1	42809035	132
ENSMUSG00000089616	misc_RNA	Gm23775	ENSMUST00000158991	misc_RNA		6	-1	141983495	249
ENSMUSG00000106409	miRNA	Mir7092	ENSMUST00000199697	miRNA		X	1	74317362	68
ENSMUSG00000105014	miRNA	Gm44367	ENSMUST00000196836	miRNA		13	-1	21716804	138
ENSMUSG00000064555	snRNA	Gm24626	ENSMUST00000082621	snRNA		5	1	85829627	161
ENSMUSG00000096550	protein_coding	Gm16367	ENSMUST00000178337	protein_coding		JH584299.1	1	477246	1446
ENSMUSG00000089546	snRNA	Gm25839	ENSMUST00000158921	snRNA		1	1	61470441	103
ENSMUSG00000064842	snRNA	Gm26206	ENSMUST00000082908	snRNA		1	1	3102016	110
ENSMUSG00000084673	rRNA	n-R5s191	ENSMUST00000122724	rRNA		4	-1	111427933	116
ENSMUSG00000098775	misc_RNA	Gm27435	ENSMUST00000183588	misc_RNA		17	1	85611676	88
ENSMUSG00000064822	snRNA	Gm24292	ENSMUST00000082888	snRNA		18	1	7835177	107
ENSMUSG00000106591	miRNA	Gm47286	ENSMUST00000199539	miRNA		6	-1	87981741	128
ENSMUSG00000088175	snRNA	Gm23101	ENSMUST00000157550	snRNA		2	1	128089924	137
ENSMUSG00000099176	miRNA	Mir6238	ENSMUST00000184140	miRNA		7	-1	53891889	129
ENSMUSG00000094855	protein_coding	AC133095.1	ENSMUST00000178327	protein_coding		JH584299.1	1	921942	1446
ENSMUSG00000098356	miRNA	Gm27552	ENSMUST00000183351	miRNA		1	-1	171072287	62
ENSMUSG00000087794	rRNA	Gm25966	ENSMUST00000157169	rRNA		2	1	61798180	117
ENSMUSG00000087761	snRNA	Gm23981	ENSMUST00000157136	snRNA		8	1	77807535	106
ENSMUSG00000095504	snRNA	Gm22446	ENSMUST00000180108	snRNA		1	-1	191762303	104
ENSMUSG00000106585	snoRNA	Gm25053	ENSMUST00000199731	snoRNA		4	-1	56897757	132
ENSMUSG00000089131	snoRNA	Gm24769	ENSMUST00000158506	snoRNA		13	1	46980720	129
ENSMUSG00000093030	miRNA	Gm23632	ENSMUST00000175289	miRNA		10	-1	120974425	125
ENSMUSG00000098868	miRNA	Gm27466	ENSMUST00000184396	miRNA		Y	1	40684181	110
ENSMUSG00000064936	snoRNA	Gm23722	ENSMUST00000083002	snoRNA		1	-1	39573875	130
ENSMUSG00000096598	snRNA	Gm26239	ENSMUST00000178842	snRNA		10	1	93807298	107
ENSMUSG00000065508	miRNA	Mir17	ENSMUST00000083574	miRNA		14	1	115043671	84
ENSMUSG00000092891	miRNA	Gm23810	ENSMUST00000175150	miRNA		3	1	40518818	74
ENSMUSG00000077527	snoRNA	Gm25506	ENSMUST00000104339	snoRNA		8	1	85050207	70
ENSMUSG00000077360	snoRNA	Gm23482	ENSMUST00000104172	snoRNA		13	1	49714119	122
ENSMUSG00000087895	miRNA	Gm25281	ENSMUST00000157270	miRNA		10	1	85333901	104
ENSMUSG00000098783	miRNA	Mir7050	ENSMUST00000184636	miRNA		7	-1	31040317	60
ENSMUSG00000092706	miRNA	Gm24510	ENSMUST00000174965	miRNA		17	1	90262552	94
ENSMUSG00000064536	snoRNA	Gm23615	ENSMUST00000082602	snoRNA		X	1	73809417	65
ENSMUSG00000098271	miRNA	Gm27828	ENSMUST00000184108	miRNA		X	1	48644340	119
ENSMUSG00000106279	miRNA	Gm47287	ENSMUST00000196389	miRNA		12	1	69159437	70
ENSMUSG00000088260	snoRNA	Gm24780	ENSMUST00000157635	snoRNA		3	-1	33393199	143
ENSMUSG00000065178	snRNA	Gm22126	ENSMUST00000083244	snRNA		13	1	35662135	142
ENSMUSG00000065592	miRNA	Mir145a	ENSMUST00000083658	miRNA		18	-1	61647894	70
ENSMUSG00000051412	protein_coding	Vamp7	ENSMUST00000051100	protein_coding		GL456233.1	-1	39148	2534
ENSMUSG00000064519	rRNA	n-R5s97	ENSMUST00000082585	rRNA		8	1	47899182	113
ENSMUSG00000088658	snRNA	Gm24846	ENSMUST00000158033	snRNA		7	-1	104264790	108
ENSMUSG00000088094	snoRNA	Gm23670	ENSMUST00000157469	snoRNA		3	-1	8679477	119
ENSMUSG00000065800	snRNA	Gm23042	ENSMUST00000083866	snRNA		7	-1	66119403	101
ENSMUSG00000064600	snoRNA	Gm25636	ENSMUST00000082666	snoRNA		7	1	110023210	133
ENSMUSG00000065403	miRNA	Mir18	ENSMUST00000083469	miRNA		14	1	115043851	96
ENSMUSG00000105321	miRNA	Gm44382	ENSMUST00000198683	miRNA		8	-1	90790947	122
ENSMUSG00000076458	miRNA	Mir764	ENSMUST00000103259	miRNA		X	1	147002259	108
ENSMUSG00000093829	snRNA	Gm24798	ENSMUST00000179334	snRNA		13	1	120045334	106
ENSMUSG00000094067	miRNA	Gm25158	ENSMUST00000177681	miRNA		2	1	10495079	121
ENSMUSG00000088356	misc_RNA	Gm24010	ENSMUST00000157731	misc_RNA		12	1	76691980	282
ENSMUSG00000098409	miRNA	Gm27410	ENSMUST00000183851	miRNA		10	-1	45816861	115
ENSMUSG00000088627	snRNA	Gm23035	ENSMUST00000158002	snRNA		6	1	93793772	106
ENSMUSG00000089326	rRNA	Gm25974	ENSMUST00000158701	rRNA		1	1	77144753	94
ENSMUSG00000067292	protein_coding	Gm10203	ENSMUST00000087348	protein_coding	principal1	6	1	149130170	198
ENSMUSG00000098580	miRNA	Mir7023	ENSMUST00000185093	miRNA		4	-1	149655567	64
ENSMUSG00000099058	miRNA	Mir6943	ENSMUST00000185186	miRNA		13	1	55453106	66
ENSMUSG00000089625	scaRNA	Gm25443	ENSMUST00000159000	scaRNA		19	1	11695267	76
ENSMUSG00000088688	snoRNA	Gm24000	ENSMUST00000158063	snoRNA		11	-1	6546235	89
ENSMUSG00000096873	protein_coding	Ccl21b	ENSMUST00000178081	protein_coding		JH584293.1	-1	60827	402
ENSMUSG00000077588	misc_RNA	Gm24372	ENSMUST00000104400	misc_RNA		18	1	21302198	110
ENSMUSG00000092639	miRNA	Mir3964	ENSMUST00000174898	miRNA		15	-1	29713404	74
ENSMUSG00000096124	snRNA	Gm22308	ENSMUST00000177609	snRNA		5	-1	59215052	107
ENSMUSG00000077231	snoRNA	Gm25096	ENSMUST00000104043	snoRNA		1	-1	35179084	129
ENSMUSG00000093271	miRNA	Gm26233	ENSMUST00000175530	miRNA		6	-1	18449340	70
ENSMUSG00000077272	snoRNA	Gm22780	ENSMUST00000104084	snoRNA		8	-1	96318618	132
ENSMUSG00000065296	snRNA	Gm26122	ENSMUST00000083362	snRNA		10	-1	94184573	82
ENSMUSG00000094915	protein_coding	AC168977.2	ENSMUST00000179715	protein_coding		GL456212.1	-1	34932	366
ENSMUSG00000076270	miRNA	Mir719	ENSMUST00000102315	miRNA		14	-1	60228915	110
ENSMUSG00000094933	miRNA	Mir683-2	ENSMUST00000102099	miRNA		13	-1	50601080	109
ENSMUSG00000106130	miRNA	Gm44361	ENSMUST00000197960	miRNA		3	-1	134147108	94
ENSMUSG00000094487	protein_coding	Gm21958	ENSMUST00000178832	protein_coding	principal1	3	-1	54714353	648
ENSMUSG00000088550	snoRNA	Gm22099	ENSMUST00000157925	snoRNA		9	1	60419863	123
ENSMUSG00000065245	snRNA	Gm22295	ENSMUST00000083311	snRNA		3	1	67055958	107
ENSMUSG00000093869	snoRNA	Gm22631	ENSMUST00000179656	snoRNA		7	-1	59781873	94
ENSMUSG00000096300	rRNA	Gm25212	ENSMUST00000179432	rRNA		8	-1	123615217	119
ENSMUSG00000077235	snoRNA	Gm25095	ENSMUST00000104047	snoRNA		1	-1	188623053	131
ENSMUSG00000064389	snRNA	Gm26446	ENSMUST00000082455	snRNA		1	1	93363255	103
ENSMUSG00000094911	protein_coding	Gm21921	ENSMUST00000180040	protein_coding	principal1	Y	-1	24796243	1083
ENSMUSG00000088660	misc_RNA	Gm25333	ENSMUST00000158035	misc_RNA		7	1	127046112	246
ENSMUSG00000088350	misc_RNA	Gm24015	ENSMUST00000157725	misc_RNA		18	-1	17126802	232
ENSMUSG00000088597	snRNA	Gm24584	ENSMUST00000157972	snRNA		3	1	83702252	107
ENSMUSG00000094127	protein_coding	G530012D18Rik	ENSMUST00000178024	protein_coding	principal1	1	1	85575676	420
ENSMUSG00000088942	snRNA	Gm23260	ENSMUST00000158317	snRNA		8	1	77194695	172
ENSMUSG00000065348	snRNA	Gm25577	ENSMUST00000083414	snRNA		12	-1	118505034	107
ENSMUSG00000093249	misc_RNA	Gm24576	ENSMUST00000175508	misc_RNA		7	1	15946248	248
ENSMUSG00000095140	snRNA	Gm24388	ENSMUST00000177872	snRNA		14	1	40421515	107
ENSMUSG00000106618	miRNA	Gm47281	ENSMUST00000197757	miRNA		Y	-1	991716	60
ENSMUSG00000094350	protein_coding	Gm10931	ENSMUST00000179627	protein_coding		JH584294.1	1	137009	552
ENSMUSG00000098965	miRNA	Gm27844	ENSMUST00000183613	miRNA		1	-1	171079901	62
ENSMUSG00000065773	snRNA	Rnu1b6	ENSMUST00000083839	snRNA		3	-1	96460189	166
ENSMUSG00000088566	snRNA	Gm23783	ENSMUST00000157941	snRNA		7	1	128734202	102
ENSMUSG00000096765	rRNA	n-R5s144	ENSMUST00000178859	rRNA		8	-1	123613532	119
ENSMUSG00000092763	miRNA	Gm23366	ENSMUST00000175022	miRNA		4	1	99657742	89
ENSMUSG00000088373	miRNA	Mir1956	ENSMUST00000157748	miRNA		3	1	138526421	65
ENSMUSG00000074215	protein_coding	Gm10643	ENSMUST00000098592	protein_coding	principal1	8	-1	84065137	1577
ENSMUSG00000105333	miRNA	Mir684-2	ENSMUST00000197598	miRNA		4	1	11134097	86
ENSMUSG00000084587	rRNA	n-R5s174	ENSMUST00000122638	rRNA		5	1	117196555	121
ENSMUSG00000065528	miRNA	Mir320	ENSMUST00000083594	miRNA		14	1	70443510	82
ENSMUSG00000099230	miRNA	Mir6989	ENSMUST00000184812	miRNA		19	1	6346480	65
ENSMUSG00000064392	snoRNA	Gm23626	ENSMUST00000082458	snoRNA		8	-1	84380581	133
ENSMUSG00000089290	snRNA	Gm23207	ENSMUST00000158665	snRNA		18	-1	23817371	102
ENSMUSG00000089486	snRNA	Gm24737	ENSMUST00000158861	snRNA		13	1	93956310	100
ENSMUSG00000089137	snRNA	Gm24768	ENSMUST00000158512	snRNA		15	1	44940542	94
ENSMUSG00000093007	miRNA	Mir15a	ENSMUST00000175266	miRNA		14	-1	61632110	84
ENSMUSG00000066938	protein_coding	Gm10190	ENSMUST00000086549	protein_coding	principal1	17	-1	80373541	324
ENSMUSG00000080516	miRNA	Gm22197	ENSMUST00000116866	miRNA		8	1	125064015	58
ENSMUSG00000088873	snRNA	Gm25864	ENSMUST00000158248	snRNA		14	1	21450474	92
ENSMUSG00000094455	rRNA	n-R5s129	ENSMUST00000180122	rRNA		8	-1	123588077	119
ENSMUSG00000096510	miRNA	Gm25892	ENSMUST00000179867	miRNA		14	-1	42280462	121
ENSMUSG00000098472	miRNA	Gm27887	ENSMUST00000184367	miRNA		16	-1	40367937	102
ENSMUSG00000116158	protein_coding	Kiss1	ENSMUST00000007433	protein_coding	principal1	1	1	133321875	779
ENSMUSG00000088878	snoRNA	Gm25868	ENSMUST00000158253	snoRNA		X	1	135165848	114
ENSMUSG00000064731	snoRNA	Snord45b	ENSMUST00000082797	snoRNA		3	-1	153910633	71
ENSMUSG00000080476	miRNA	Gm25316	ENSMUST00000116826	miRNA		2	1	10499966	118
ENSMUSG00000098567	misc_RNA	Gm27762	ENSMUST00000183417	misc_RNA		6	1	17693937	109
ENSMUSG00000095624	snRNA	Gm23947	ENSMUST00000093636	snRNA		17	-1	88392932	107
ENSMUSG00000077710	snoRNA	Gm25727	ENSMUST00000104522	snoRNA		3	-1	56445412	131
ENSMUSG00000095389	snoRNA	Gm23953	ENSMUST00000178214	snoRNA		7	-1	59736406	94
ENSMUSG00000105420	miRNA	Gm44374	ENSMUST00000199821	miRNA		2	1	112614030	140
ENSMUSG00000064816	snoRNA	Gm22357	ENSMUST00000082882	snoRNA		1	1	161036057	83
ENSMUSG00000092795	miRNA	Gm22690	ENSMUST00000175054	miRNA		4	-1	16129675	110
ENSMUSG00000116158	protein_coding	Kiss1	ENSMUST00000178033	protein_coding	principal1	1	1	133327212	496
ENSMUSG00000098805	misc_RNA	Gm27470	ENSMUST00000184070	misc_RNA		7	-1	91123211	210
ENSMUSG00000065904	snoRNA	Gm26109	ENSMUST00000083970	snoRNA		18	-1	34942713	70
ENSMUSG00000064570	snoRNA	Gm25800	ENSMUST00000082636	snoRNA		17	-1	62457120	134
ENSMUSG00000088389	misc_RNA	Gm24685	ENSMUST00000157764	misc_RNA		12	-1	56267204	285
ENSMUSG00000077787	snoRNA	Gm23908	ENSMUST00000104599	snoRNA		6	-1	118112045	132
ENSMUSG00000105778	miRNA	Mir7229	ENSMUST00000197062	miRNA		5	-1	113324545	53
ENSMUSG00000094831	snoRNA	Gm25474	ENSMUST00000179052	snoRNA		7	-1	59784386	94
ENSMUSG00000092963	miRNA	Gm22238	ENSMUST00000175222	miRNA		9	-1	107231708	88
ENSMUSG00000106471	miRNA	Mir3107	ENSMUST00000199351	miRNA		8	-1	23142662	90
ENSMUSG00000084659	snRNA	Gm22720	ENSMUST00000122710	snRNA		9	-1	105673551	87
ENSMUSG00000064805	snRNA	Gm24037	ENSMUST00000082871	snRNA		2	-1	85885334	180
ENSMUSG00000077789	rRNA	n-R5s26	ENSMUST00000104601	rRNA		17	1	6147419	122
ENSMUSG00000074473	protein_coding	A230072I06Rik	ENSMUST00000098935	protein_coding	principal1	8	1	12278819	1839
ENSMUSG00000087758	misc_RNA	Gm23466	ENSMUST00000157133	misc_RNA		4	1	34434296	106
ENSMUSG00000106431	miRNA	Gm44492	ENSMUST00000197012	miRNA		3	1	96220501	141
ENSMUSG00000094274	snoRNA	Snord116l12	ENSMUST00000179816	snoRNA		7	-1	59904848	94
ENSMUSG00000088047	snoRNA	Gm23325	ENSMUST00000157422	snoRNA		X	1	143413898	129
ENSMUSG00000098631	miRNA	Mir6957	ENSMUST00000183708	miRNA		15	1	80646073	64
ENSMUSG00000088426	snRNA	Gm22555	ENSMUST00000157801	snRNA		6	1	130011837	62
ENSMUSG00000065432	miRNA	Mir208a	ENSMUST00000083498	miRNA		14	-1	54949142	83
ENSMUSG00000093340	miRNA	Gm26117	ENSMUST00000175599	miRNA		15	1	74563821	95
ENSMUSG00000064464	snRNA	Gm25078	ENSMUST00000082530	snRNA		X	-1	45795467	107
ENSMUSG00000084749	misc_RNA	Gm25288	ENSMUST00000122800	misc_RNA		1	1	176793956	265
ENSMUSG00000106091	miRNA	Gm44370	ENSMUST00000175436	miRNA		12	1	91123252	112
ENSMUSG00000077581	snoRNA	Gm24373	ENSMUST00000104393	snoRNA		3	1	157210929	132
ENSMUSG00000076320	miRNA	Gm26340	ENSMUST00000102365	miRNA		5	1	134448574	99
ENSMUSG00000095372	snoRNA	Gm22111	ENSMUST00000178010	snoRNA		7	-1	59447452	79
ENSMUSG00000089209	scaRNA	Gm26215	ENSMUST00000158584	scaRNA		6	-1	53010532	139
ENSMUSG00000105372	miRNA	Mir327	ENSMUST00000199328	miRNA		14	-1	44947511	69
ENSMUSG00000087810	snoRNA	Gm25113	ENSMUST00000157185	snoRNA		11	1	92910297	143
ENSMUSG00000076218	miRNA	Mir692-1	ENSMUST00000102263	miRNA		17	-1	6895337	109
ENSMUSG00000093278	miRNA	Mir5110	ENSMUST00000175537	miRNA		11	-1	85760702	87
ENSMUSG00000080662	miRNA	Mir1b	ENSMUST00000117012	miRNA		18	1	10785446	122
ENSMUSG00000093618	miRNA	Mir5627	ENSMUST00000177238	miRNA		12	1	44210313	61
ENSMUSG00000080345	miRNA	Gm24586	ENSMUST00000116695	miRNA		1	-1	96266941	89
ENSMUSG00000095980	snRNA	Gm23050	ENSMUST00000158775	snRNA		17	-1	13120695	165
ENSMUSG00000084700	snRNA	Gm22984	ENSMUST00000122751	snRNA		14	-1	99352169	122
ENSMUSG00000087816	snoRNA	Gm25116	ENSMUST00000157191	snoRNA		18	1	10757536	122
ENSMUSG00000088405	snRNA	Gm25886	ENSMUST00000157780	snRNA		14	1	89393076	114
ENSMUSG00000096631	miRNA	Gm22171	ENSMUST00000179283	miRNA		7	-1	89295864	110
ENSMUSG00000094168	protein_coding	Gm21903	ENSMUST00000178039	protein_coding	principal1	17	-1	39043341	90
ENSMUSG00000070105	miRNA	Mir495	ENSMUST00000093597	miRNA		12	1	109718754	63
ENSMUSG00000080540	snoRNA	Gm22711	ENSMUST00000116890	snoRNA		11	1	106501245	133
ENSMUSG00000089244	miRNA	Gm24054	ENSMUST00000158619	miRNA		5	-1	13902874	105
ENSMUSG00000093215	miRNA	Mir3103	ENSMUST00000175474	miRNA		7	-1	128288435	67
ENSMUSG00000089482	rRNA	Gm24741	ENSMUST00000158857	rRNA		12	1	117574342	106
ENSMUSG00000105365	miRNA	Mir669a-10	ENSMUST00000197745	miRNA		2	1	10498911	87
ENSMUSG00000089226	rRNA	Gm22076	ENSMUST00000158601	rRNA		12	1	45359699	84
ENSMUSG00000093907	miRNA	Gm25022	ENSMUST00000102205	miRNA		2	1	10500822	83
ENSMUSG00000088179	snRNA	Gm23106	ENSMUST00000157554	snRNA		4	1	135583748	101
ENSMUSG00000095879	protein_coding	Gm21764	ENSMUST00000179219	protein_coding	principal1	Y	-1	18061812	543
ENSMUSG00000089342	snRNA	Gm22666	ENSMUST00000158717	snRNA		X	1	157053955	164
ENSMUSG00000087869	misc_RNA	Gm24444	ENSMUST00000157244	misc_RNA		7	-1	136509333	308
ENSMUSG00000080663	miRNA	Gm25002	ENSMUST00000117013	miRNA		4	1	11948887	64
ENSMUSG00000093089	miRNA	Gm24321	ENSMUST00000175348	miRNA		12	-1	109743237	80
ENSMUSG00000092838	miRNA	Gm24824	ENSMUST00000175097	miRNA		X	-1	20823814	78
ENSMUSG00000096425	miRNA	Gm24979	ENSMUST00000178626	miRNA		17	1	45209966	126
ENSMUSG00000098341	miRNA	Mir6944	ENSMUST00000183653	miRNA		13	-1	55477776	96
ENSMUSG00000089291	snoRNA	Gm23208	ENSMUST00000158666	snoRNA		1	-1	165571976	127
ENSMUSG00000089416	snRNA	Gm22116	ENSMUST00000158791	snRNA		14	-1	49520169	141
ENSMUSG00000094287	snoRNA	Gm26433	ENSMUST00000180227	snoRNA		7	-1	59859307	94
ENSMUSG00000089460	snoRNA	Gm23699	ENSMUST00000158835	snoRNA		11	1	115727143	135
ENSMUSG00000104536	snoRNA	Gm23786	ENSMUST00000200181	snoRNA		X	1	162748556	119
ENSMUSG00000065645	misc_RNA	Gm23875	ENSMUST00000083711	misc_RNA		12	-1	32355202	318
ENSMUSG00000098454	miRNA	Mir7032	ENSMUST00000185154	miRNA		5	1	123996852	79
ENSMUSG00000098651	miRNA	Mir6999	ENSMUST00000183498	miRNA		2	-1	91944930	61
ENSMUSG00000099254	miRNA	Mir7030	ENSMUST00000183566	miRNA		5	1	115645573	60
ENSMUSG00000089011	snoRNA	Gm24879	ENSMUST00000158386	snoRNA		16	-1	31747342	143
ENSMUSG00000077625	snoRNA	Snord4a	ENSMUST00000104437	snoRNA		11	-1	78181756	71
ENSMUSG00000070141	miRNA	Mir494	ENSMUST00000093632	miRNA		12	1	109715318	85
ENSMUSG00000077316	rRNA	n-R5s171	ENSMUST00000104128	rRNA		5	1	53143160	79
ENSMUSG00000096148	snoRNA	Gm25816	ENSMUST00000179764	snoRNA		7	-1	59703520	94
ENSMUSG00000095382	miRNA	Gm24466	ENSMUST00000179978	miRNA		12	-1	72130318	109
ENSMUSG00000093224	miRNA	Gm25750	ENSMUST00000175483	miRNA		12	-1	109711890	112
ENSMUSG00000084579	snRNA	Gm23661	ENSMUST00000122630	snRNA		5	1	69919095	87
ENSMUSG00000092849	miRNA	Gm24327	ENSMUST00000175108	miRNA		2	-1	168064897	78
ENSMUSG00000080686	miRNA	Gm24806	ENSMUST00000117036	miRNA		2	1	10517337	90
ENSMUSG00000084515	snRNA	Gm22479	ENSMUST00000122566	snRNA		9	-1	118467064	81
ENSMUSG00000098362	miRNA	Mir130c	ENSMUST00000184489	miRNA		9	-1	53400886	82
ENSMUSG00000087792	snRNA	Gm25968	ENSMUST00000157167	snRNA		11	-1	87694581	100
ENSMUSG00000076119	miRNA	Mir698	ENSMUST00000102164	miRNA		4	1	124743781	109
ENSMUSG00000065485	miRNA	Mir219a-2	ENSMUST00000083551	miRNA		2	-1	29845727	97
ENSMUSG00000075826	snRNA	Gm23691	ENSMUST00000101878	snRNA		2	-1	4381067	107
ENSMUSG00000084454	snRNA	Gm24592	ENSMUST00000122505	snRNA		6	-1	120381139	106
ENSMUSG00000088733	snRNA	Gm23895	ENSMUST00000158108	snRNA		18	1	78648128	160
ENSMUSG00000093529	miRNA	Gm25397	ENSMUST00000176951	miRNA		15	1	96404858	92
ENSMUSG00000064584	snRNA	Gm25130	ENSMUST00000082650	snRNA		14	-1	99360827	156
ENSMUSG00000105249	miRNA	Gm44458	ENSMUST00000196594	miRNA		1	1	165694765	143
ENSMUSG00000095380	miRNA	Gm23952	ENSMUST00000179380	miRNA		13	-1	50679645	109
ENSMUSG00000077542	snoRNA	Gm22023	ENSMUST00000104354	snoRNA		X	1	164283096	130
ENSMUSG00000094406	snRNA	Gm23142	ENSMUST00000101848	snRNA		8	-1	21040360	105
ENSMUSG00000098268	miRNA	Gm27514	ENSMUST00000183692	miRNA		6	-1	129189124	110
ENSMUSG00000077526	snoRNA	Gm25379	ENSMUST00000104338	snoRNA		8	1	57549775	114
ENSMUSG00000098638	miRNA	Gm27743	ENSMUST00000185136	miRNA		4	1	155789581	126
ENSMUSG00000065299	snRNA	Gm23138	ENSMUST00000083365	snRNA		4	1	108498044	103
ENSMUSG00000099184	miRNA	Mir6337	ENSMUST00000184194	miRNA		2	-1	65364400	105
ENSMUSG00000099014	miRNA	Gm27359	ENSMUST00000184153	miRNA		17	1	82193755	110
ENSMUSG00000089621	misc_RNA	Gm25445	ENSMUST00000158996	misc_RNA		4	-1	53721200	299
ENSMUSG00000064841	snoRNA	Gm26205	ENSMUST00000082907	snoRNA		5	1	121205010	134
ENSMUSG00000065544	miRNA	Mir32	ENSMUST00000083610	miRNA		4	-1	56895298	70
ENSMUSG00000088385	snRNA	Gm24689	ENSMUST00000157760	snRNA		14	1	50918425	104
ENSMUSG00000095310	snoRNA	Gm25463	ENSMUST00000179405	snoRNA		7	-1	59412880	79
ENSMUSG00000095085	snRNA	Gm25326	ENSMUST00000101903	snRNA		7	1	47413834	107
ENSMUSG00000077262	rRNA	n-R5s165	ENSMUST00000104074	rRNA		6	-1	112234262	100
ENSMUSG00000084476	snRNA	Gm25781	ENSMUST00000122527	snRNA		14	1	120798853	84
ENSMUSG00000087848	rRNA	Gm25621	ENSMUST00000157223	rRNA		3	1	69685467	114
ENSMUSG00000089335	snoRNA	Gm24348	ENSMUST00000158710	snoRNA		6	1	48934794	130
ENSMUSG00000089422	snRNA	Gm26008	ENSMUST00000158797	snRNA		6	-1	39265942	99
ENSMUSG00000088113	miRNA	Mir1960	ENSMUST00000157488	miRNA		5	1	30170739	78
ENSMUSG00000098503	misc_RNA	Gm27937	ENSMUST00000183605	misc_RNA		11	-1	3647029	88
ENSMUSG00000076229	miRNA	Gm25594	ENSMUST00000102274	miRNA		18	-1	74910233	82
ENSMUSG00000064590	snRNA	Gm22301	ENSMUST00000082656	snRNA		3	1	95099500	107
ENSMUSG00000084595	rRNA	n-R5s188	ENSMUST00000122646	rRNA		4	1	82439410	105
ENSMUSG00000096134	miRNA	Mir669p-1	ENSMUST00000103884	miRNA		2	1	10489116	87
ENSMUSG00000094889	scaRNA	Gm25119	ENSMUST00000158815	scaRNA		17	-1	7042565	88
ENSMUSG00000105984	miRNA	Gm44372	ENSMUST00000199388	miRNA		12	-1	116152221	121
ENSMUSG00000098842	miRNA	Gm27907	ENSMUST00000185101	miRNA		1	1	85012367	80
ENSMUSG00000104911	miRNA	Gm47288	ENSMUST00000198820	miRNA		15	1	12842096	140
ENSMUSG00000096651	miRNA	Gm25680	ENSMUST00000116917	miRNA		2	1	10485051	126
ENSMUSG00000065546	miRNA	Mir196a-1	ENSMUST00000083612	miRNA		11	1	96265164	102
ENSMUSG00000087871	snRNA	Gm26101	ENSMUST00000157246	snRNA		9	1	91839770	105
ENSMUSG00000094718	miRNA	Gm22825	ENSMUST00000179444	miRNA		8	1	107842451	101
ENSMUSG00000096263	snoRNA	Snord14c	ENSMUST00000101927	snoRNA		9	1	40803583	86
ENSMUSG00000096786	snRNA	Gm24641	ENSMUST00000178055	snRNA		9	-1	109358335	107
ENSMUSG00000096079	miRNA	Gm23961	ENSMUST00000104685	miRNA		6	-1	22768202	97
ENSMUSG00000098486	snRNA	Gm27385	ENSMUST00000184747	snRNA		2	1	139588227	104
ENSMUSG00000065536	miRNA	Mir98	ENSMUST00000083602	miRNA		X	1	151913214	108
ENSMUSG00000088864	misc_RNA	Gm23068	ENSMUST00000158239	misc_RNA		X	1	136704178	293
ENSMUSG00000094405	snRNA	Gm23143	ENSMUST00000180137	snRNA		4	1	117202528	116
ENSMUSG00000099263	misc_RNA	Gm27772	ENSMUST00000184900	misc_RNA		6	1	83702491	187
ENSMUSG00000089316	misc_RNA	Gm22261	ENSMUST00000158691	misc_RNA		2	-1	147250785	324
ENSMUSG00000098453	miRNA	Mir6997	ENSMUST00000184313	miRNA		2	1	29995950	71
ENSMUSG00000089610	misc_RNA	Gm23773	ENSMUST00000158985	misc_RNA		17	1	61259651	296
ENSMUSG00000098298	misc_RNA	Gm27970	ENSMUST00000184854	misc_RNA		19	-1	17057187	407
ENSMUSG00000065556	miRNA	Mir101b	ENSMUST00000083622	miRNA		19	1	29135279	97
ENSMUSG00000088054	miRNA	Mir1968	ENSMUST00000157429	miRNA		8	-1	13189098	68
ENSMUSG00000096381	snRNA	Gm25354	ENSMUST00000179110	snRNA		7	1	15593231	105
ENSMUSG00000065456	miRNA	Mir106a	ENSMUST00000083522	miRNA		X	-1	52742567	65
ENSMUSG00000089009	snRNA	Gm23858	ENSMUST00000158384	snRNA		2	-1	121135296	106
ENSMUSG00000099159	misc_RNA	Gm27801	ENSMUST00000184174	misc_RNA		17	1	85613382	223
ENSMUSG00000105585	miRNA	Mir30f	ENSMUST00000196073	miRNA		4	1	120772606	92
ENSMUSG00000094768	snRNA	Gm25524	ENSMUST00000101821	snRNA		1	1	74212813	107
ENSMUSG00000089156	snRNA	Gm23581	ENSMUST00000158531	snRNA		18	1	63508169	63
ENSMUSG00000084501	misc_RNA	Gm25319	ENSMUST00000122552	misc_RNA		10	-1	114911035	325
ENSMUSG00000105169	miRNA	Gm44476	ENSMUST00000196225	miRNA		18	-1	41342371	91
ENSMUSG00000105399	miRNA	Mir1843b	ENSMUST00000198115	miRNA		1	1	159340358	66
ENSMUSG00000065568	miRNA	Mir344	ENSMUST00000083634	miRNA		7	-1	61877864	95
ENSMUSG00000089551	snRNA	Gm24178	ENSMUST00000158926	snRNA		9	1	94644019	96
ENSMUSG00000088601	misc_RNA	Gm24190	ENSMUST00000157976	misc_RNA		19	-1	18776961	216
ENSMUSG00000088705	snRNA	Gm25549	ENSMUST00000158080	snRNA		1	-1	131073751	94
ENSMUSG00000064767	snoRNA	Snord35b	ENSMUST00000082833	snoRNA		7	-1	45123111	87
ENSMUSG00000087913	rRNA	Gm24915	ENSMUST00000157288	rRNA		13	1	46518684	78
ENSMUSG00000088626	snoRNA	Gm23034	ENSMUST00000158001	snoRNA		9	-1	108795388	147
ENSMUSG00000099128	miRNA	Mir6382	ENSMUST00000184055	miRNA		X	1	106309826	110
ENSMUSG00000065451	miRNA	Mir101a	ENSMUST00000083517	miRNA		4	-1	101347027	83
ENSMUSG00000094175	miRNA	Gm24427	ENSMUST00000116896	miRNA		17	1	24304669	121
ENSMUSG00000087950	miRNA	Mir1948	ENSMUST00000157325	miRNA		18	1	12714811	85
ENSMUSG00000080378	snRNA	Gm25309	ENSMUST00000116728	snRNA		8	-1	45864603	126
ENSMUSG00000096774	snRNA	Gm22113	ENSMUST00000158343	snRNA		19	1	7246709	104
ENSMUSG00000094604	snoRNA	Gm25874	ENSMUST00000178030	snoRNA		7	-1	59451193	79
ENSMUSG00000065475	miRNA	Mir27b	ENSMUST00000083541	miRNA		13	1	63300712	73
ENSMUSG00000098464	miRNA	Mir7002	ENSMUST00000184524	miRNA		2	-1	114150570	55
ENSMUSG00000089195	snRNA	Gm25768	ENSMUST00000158570	snRNA		5	-1	72305462	98
ENSMUSG00000088915	snRNA	Gm22606	ENSMUST00000158290	snRNA		2	1	79348365	103
ENSMUSG00000084507	snRNA	Gm25321	ENSMUST00000122558	snRNA		8	-1	109840689	102
ENSMUSG00000093824	snoRNA	Gm24799	ENSMUST00000178431	snoRNA		7	-1	59409141	79
ENSMUSG00000077972	miRNA	Mir466f-1	ENSMUST00000104779	miRNA		2	1	10466944	94
ENSMUSG00000064412	snRNA	Gm22246	ENSMUST00000082478	snRNA		12	1	95619818	107
ENSMUSG00000088479	snoRNA	Gm23077	ENSMUST00000157854	snoRNA		3	1	104201110	116
ENSMUSG00000077244	snoRNA	Gm23274	ENSMUST00000104056	snoRNA		1	1	7265803	130
ENSMUSG00000077637	snoRNA	Gm22771	ENSMUST00000104449	snoRNA		11	1	74906109	91
ENSMUSG00000088562	misc_RNA	Gm23780	ENSMUST00000157937	misc_RNA		1	-1	184858412	275
ENSMUSG00000093266	miRNA	Gm23417	ENSMUST00000175525	miRNA		X	-1	51219192	83
ENSMUSG00000088295	misc_RNA	Gm26410	ENSMUST00000157670	misc_RNA		4	-1	94434484	261
ENSMUSG00000105433	miRNA	Gm44486	ENSMUST00000198508	miRNA		13	1	22042545	138
ENSMUSG00000065726	snoRNA	Gm26163	ENSMUST00000083792	snoRNA		15	-1	30052556	178
ENSMUSG00000088018	snRNA	Gm23390	ENSMUST00000157393	snRNA		2	1	91200162	106
ENSMUSG00000084627	misc_RNA	Gm25543	ENSMUST00000122678	misc_RNA		11	1	42897495	312
ENSMUSG00000099227	miRNA	Mir8114	ENSMUST00000183582	miRNA		1	1	153899926	111
ENSMUSG00000065597	miRNA	Mir124a-1	ENSMUST00000083663	miRNA		14	1	64590657	85
ENSMUSG00000099097	miRNA	Gm27341	ENSMUST00000183570	miRNA		X	-1	26579982	106
ENSMUSG00000094785	snRNA	Gm24661	ENSMUST00000083205	snRNA		17	-1	30782129	104
ENSMUSG00000089093	snoRNA	Snord11	ENSMUST00000158468	snoRNA		1	1	59704790	84
ENSMUSG00000106297	miRNA	Gm47285	ENSMUST00000199436	miRNA		12	-1	85718563	61
ENSMUSG00000064540	snoRNA	Snord42a	ENSMUST00000082606	snoRNA		11	-1	78181363	65
ENSMUSG00000089157	snoRNA	Gm22425	ENSMUST00000158532	snoRNA		6	-1	67792576	138
ENSMUSG00000093875	snRNA	Gm24538	ENSMUST00000082612	snRNA		5	-1	29481631	107
ENSMUSG00000078038	miRNA	Mir881	ENSMUST00000104844	miRNA		X	-1	66802021	78
ENSMUSG00000089149	misc_RNA	Gm22282	ENSMUST00000158524	misc_RNA		3	1	19330773	312
ENSMUSG00000089073	rRNA	Gm23380	ENSMUST00000158448	rRNA		2	-1	93386829	103
ENSMUSG00000092866	miRNA	Gm25476	ENSMUST00000175125	miRNA		18	1	56221834	185
ENSMUSG00000088634	snoRNA	Gm24958	ENSMUST00000158009	snoRNA		11	1	5038211	97
ENSMUSG00000077092	miRNA	Mir742	ENSMUST00000103904	miRNA		X	-1	66780437	65
ENSMUSG00000095425	snoRNA	Gm24417	ENSMUST00000178123	snoRNA		7	-1	59362706	79
ENSMUSG00000096243	snRNA	Gm24265	ENSMUST00000101833	snRNA		5	1	115489459	141
ENSMUSG00000076952	miRNA	Gm24934	ENSMUST00000103764	miRNA		8	1	3781020	111
ENSMUSG00000065030	rRNA	n-R5s160	ENSMUST00000083096	rRNA		6	1	12742899	120
ENSMUSG00000077846	miRNA	Gm22232	ENSMUST00000104654	miRNA		1	1	134809275	94
ENSMUSG00000099143	misc_RNA	Gm27483	ENSMUST00000184983	misc_RNA		7	1	142576853	71
ENSMUSG00000098555	miRNA	Mir6341	ENSMUST00000183490	miRNA		1	1	12425986	121
ENSMUSG00000089273	misc_RNA	Gm24550	ENSMUST00000158648	misc_RNA		7	-1	36751473	279
ENSMUSG00000088088	ribozyme	Rmrp	ENSMUST00000157463	ribozyme		4	-1	43493058	271
ENSMUSG00000088696	snRNA	Gm22333	ENSMUST00000158071	snRNA		5	-1	24438586	101
ENSMUSG00000092648	miRNA	Gm23566	ENSMUST00000174907	miRNA		13	1	51765294	108
ENSMUSG00000095016	snRNA	Gm26285	ENSMUST00000177923	snRNA		5	1	139443599	107
ENSMUSG00000096738	snRNA	Gm24317	ENSMUST00000178536	snRNA		4	1	15383148	107
ENSMUSG00000088008	scaRNA	Gm25492	ENSMUST00000157383	scaRNA		5	-1	135054116	129
ENSMUSG00000089615	snoRNA	Gm23774	ENSMUST00000158990	snoRNA		13	-1	22879507	131
ENSMUSG00000084608	misc_RNA	Gm22198	ENSMUST00000122659	misc_RNA		9	1	118287786	307
ENSMUSG00000064856	snRNA	Gm23444	ENSMUST00000082922	snRNA		11	1	83271498	191
ENSMUSG00000096522	miRNA	Gm26386	ENSMUST00000178407	miRNA		6	1	24143368	101
ENSMUSG00000092714	miRNA	Gm22854	ENSMUST00000174973	miRNA		9	-1	18460293	84
ENSMUSG00000088122	misc_RNA	Gm26069	ENSMUST00000157497	misc_RNA		4	1	85909911	277
ENSMUSG00000080609	miRNA	Gm23844	ENSMUST00000116959	miRNA		7	-1	67778530	121
ENSMUSG00000094826	snRNA	Gm23804	ENSMUST00000179675	snRNA		12	1	54714218	164
ENSMUSG00000089092	snRNA	Gm25654	ENSMUST00000158467	snRNA		13	-1	64296524	88
ENSMUSG00000098529	rRNA	Gm27362	ENSMUST00000184868	rRNA		1	-1	31122862	138
ENSMUSG00000064442	snoRNA	Gm26225	ENSMUST00000082508	snoRNA		14	1	64753918	135
ENSMUSG00000080622	snoRNA	Gm22676	ENSMUST00000116972	snoRNA		2	1	112500869	129
ENSMUSG00000064450	snoRNA	Snord68	ENSMUST00000082516	snoRNA		8	1	123103038	86
ENSMUSG00000098316	miRNA	Mir7683	ENSMUST00000183842	miRNA		1	-1	171641900	61
ENSMUSG00000088817	snoRNA	Gm22386	ENSMUST00000158192	snoRNA		17	-1	82232272	129
ENSMUSG00000077931	miRNA	Mir877	ENSMUST00000104738	miRNA		17	-1	35960814	85
ENSMUSG00000065673	snoRNA	Gm24258	ENSMUST00000083739	snoRNA		14	1	66970452	133
ENSMUSG00000098876	miRNA	Mir6350	ENSMUST00000183639	miRNA		1	-1	47467125	105
ENSMUSG00000084624	rRNA	n-R5s189	ENSMUST00000122675	rRNA		4	1	95062650	114
ENSMUSG00000088091	rRNA	Gm23667	ENSMUST00000157466	rRNA		11	1	86408826	120
ENSMUSG00000088539	snoRNA	Gm23277	ENSMUST00000157914	snoRNA		X	1	121712089	136
ENSMUSG00000096599	rRNA	n-R5s114	ENSMUST00000178297	rRNA		8	-1	123562713	119
ENSMUSG00000093189	ribozyme	Gm25694	ENSMUST00000175448	ribozyme		10	-1	5036456	282
ENSMUSG00000095073	rRNA	n-R5s101	ENSMUST00000177910	rRNA		8	-1	123540611	119
ENSMUSG00000106228	miRNA	Mir3073b	ENSMUST00000199383	miRNA		12	-1	112109309	60
ENSMUSG00000088736	snRNA	Gm23898	ENSMUST00000158111	snRNA		8	1	24938300	103
ENSMUSG00000096358	rRNA	n-R5s131	ENSMUST00000180280	rRNA		8	-1	123591489	119
ENSMUSG00000096046	snoRNA	Gm24969	ENSMUST00000180331	snoRNA		7	-1	59360838	79
ENSMUSG00000077166	snoRNA	Gm24120	ENSMUST00000103978	snoRNA		7	-1	69957904	129
ENSMUSG00000098711	misc_RNA	Gm28030	ENSMUST00000184987	misc_RNA		5	1	100429101	138
ENSMUSG00000089473	snoRNA	Gm25369	ENSMUST00000158848	snoRNA		10	1	4169887	132
ENSMUSG00000077587	snoRNA	Gm24376	ENSMUST00000104399	snoRNA		4	-1	44412595	127
ENSMUSG00000092758	miRNA	Gm25026	ENSMUST00000175017	miRNA		2	1	145878286	188
ENSMUSG00000064904	snRNA	Gm25404	ENSMUST00000082970	snRNA		3	1	55548446	107
ENSMUSG00000087779	snRNA	Gm23765	ENSMUST00000157154	snRNA		11	1	85493759	147
ENSMUSG00000064956	snoRNA	Gm24918	ENSMUST00000083022	snoRNA		9	1	3352657	130
ENSMUSG00000080402	miRNA	Gm23652	ENSMUST00000116752	miRNA		14	-1	78246311	107
ENSMUSG00000096412	snRNA	Gm25484	ENSMUST00000178217	snRNA		9	-1	109347630	107
ENSMUSG00000088365	misc_RNA	Gm26321	ENSMUST00000157740	misc_RNA		2	1	68484143	242
ENSMUSG00000087966	snRNA	Gm25390	ENSMUST00000157341	snRNA		10	1	91005741	103
ENSMUSG00000098494	miRNA	Gm27690	ENSMUST00000184596	miRNA		6	-1	107448944	126
ENSMUSG00000089364	snoRNA	Gm23822	ENSMUST00000158739	snoRNA		5	1	18864577	128
ENSMUSG00000095188	miRNA	Gm26376	ENSMUST00000104784	miRNA		17	1	40051904	110
ENSMUSG00000099233	miRNA	Gm27883	ENSMUST00000183941	miRNA		16	-1	19883900	102
ENSMUSG00000098614	misc_RNA	Gm27301	ENSMUST00000184012	misc_RNA		13	1	56703641	127
ENSMUSG00000088193	rRNA	Gm23905	ENSMUST00000157568	rRNA		17	1	83947588	109
ENSMUSG00000098287	miRNA	Mir6355	ENSMUST00000183687	miRNA		18	1	59579630	106
ENSMUSG00000064390	snoRNA	Rnu73b	ENSMUST00000082456	snoRNA		3	-1	86140688	71
ENSMUSG00000080336	miRNA	Gm25111	ENSMUST00000116686	miRNA		6	1	36699397	147
ENSMUSG00000080406	miRNA	Mir1188	ENSMUST00000116756	miRNA		12	1	109611822	120
ENSMUSG00000077948	miRNA	Gm23438	ENSMUST00000104755	miRNA		14	-1	86920711	91
ENSMUSG00000094713	snRNA	Gm22822	ENSMUST00000177941	snRNA		7	-1	109774718	107
ENSMUSG00000065012	snRNA	Gm23507	ENSMUST00000083078	snRNA		11	1	88905121	107
ENSMUSG00000094096	miRNA	Gm25649	ENSMUST00000178476	miRNA		13	-1	62013144	110
ENSMUSG00000093734	misc_RNA	Gm25082	ENSMUST00000177296	misc_RNA		11	1	51270435	255
ENSMUSG00000098983	miRNA	Gm28003	ENSMUST00000184529	miRNA		16	1	93072755	68
ENSMUSG00000065401	miRNA	Mir144	ENSMUST00000083467	miRNA		11	1	78073005	66
ENSMUSG00000098795	misc_RNA	Gm27403	ENSMUST00000184662	misc_RNA		3	1	34560340	214
ENSMUSG00000099002	snoRNA	Gm25053	ENSMUST00000103982	snoRNA		4	-1	56897757	133
ENSMUSG00000104589	miRNA	Gm44311	ENSMUST00000196448	miRNA		9	1	42442852	69
ENSMUSG00000064563	snoRNA	Snora7a	ENSMUST00000082629	snoRNA		6	-1	115808114	140
ENSMUSG00000095245	snRNA	Gm24753	ENSMUST00000178183	snRNA		15	1	77067791	107
ENSMUSG00000098725	misc_RNA	Gm27335	ENSMUST00000184758	misc_RNA		X	-1	88759755	97
ENSMUSG00000065362	snoRNA	Gm24411	ENSMUST00000083428	snoRNA		2	-1	158356554	131
ENSMUSG00000098774	miRNA	Mir6930	ENSMUST00000183859	miRNA		11	-1	102404987	68
ENSMUSG00000065314	snRNA	Gm26065	ENSMUST00000083380	snRNA		X	-1	20800436	105
ENSMUSG00000087876	misc_RNA	Gm26102	ENSMUST00000157251	misc_RNA		8	1	4274853	284
ENSMUSG00000099257	miRNA	Mir6342	ENSMUST00000183870	miRNA		1	1	29421488	125
ENSMUSG00000088796	snoRNA	Gm22536	ENSMUST00000158171	snoRNA		5	1	58414228	134
ENSMUSG00000080461	snoRNA	Gm22488	ENSMUST00000116811	snoRNA		15	1	58146616	127
ENSMUSG00000104827	snoRNA	Gm24826	ENSMUST00000197298	snoRNA		1	1	39519533	216
ENSMUSG00000077349	snRNA	Gm24867	ENSMUST00000104161	snRNA		17	1	13675376	107
ENSMUSG00000098719	miRNA	Mir7212	ENSMUST00000184098	miRNA		15	1	25948227	61
ENSMUSG00000088802	snRNA	Gm24073	ENSMUST00000158177	snRNA		14	-1	114980533	106
ENSMUSG00000089624	snRNA	Gm25444	ENSMUST00000158999	snRNA		13	-1	14628731	113
ENSMUSG00000099204	miRNA	Gm27943	ENSMUST00000184844	miRNA		1	-1	75209728	116
ENSMUSG00000095684	miRNA	Gm23282	ENSMUST00000175306	miRNA		13	-1	22212519	101
ENSMUSG00000092965	snRNA	Gm22242	ENSMUST00000175224	snRNA		9	1	52756908	118
ENSMUSG00000088320	snoRNA	Gm25665	ENSMUST00000157695	snoRNA		8	-1	18274821	110
ENSMUSG00000088189	snoRNA	Gm22213	ENSMUST00000157564	snoRNA		13	-1	44838283	119
ENSMUSG00000106169	miRNA	Mir6948	ENSMUST00000196776	miRNA		14	-1	54643110	62
ENSMUSG00000088987	snRNA	Gm25602	ENSMUST00000158362	snRNA		10	-1	54713037	62
ENSMUSG00000084503	misc_RNA	Gm25318	ENSMUST00000122554	misc_RNA		16	-1	47596086	314
ENSMUSG00000094938	snRNA	Gm23092	ENSMUST00000178688	snRNA		5	-1	91218004	107
ENSMUSG00000095752	snRNA	Gm24182	ENSMUST00000179419	snRNA		1	1	167349025	107
ENSMUSG00000065160	snoRNA	Gm50452	ENSMUST00000083226	snoRNA		1	1	161037356	84
ENSMUSG00000077304	snoRNA	Gm22471	ENSMUST00000104116	snoRNA		11	-1	5560735	130
ENSMUSG00000087731	rRNA	Gm24649	ENSMUST00000157106	rRNA		9	1	87200109	134
ENSMUSG00000065797	snRNA	Gm25512	ENSMUST00000083863	snRNA		2	1	164601936	107
ENSMUSG00000084613	rRNA	n-R5s164	ENSMUST00000122664	rRNA		6	1	87281149	112
ENSMUSG00000065182	snoRNA	Gm25138	ENSMUST00000083248	snoRNA		8	1	82409091	136
ENSMUSG00000099136	misc_RNA	Gm27608	ENSMUST00000184822	misc_RNA		10	-1	92075652	162
ENSMUSG00000077273	snRNA	Gm22779	ENSMUST00000104085	snRNA		5	-1	38699812	107
ENSMUSG00000093212	miRNA	Gm25249	ENSMUST00000175471	miRNA		7	-1	64956576	78
ENSMUSG00000093539	miRNA	Mir5621	ENSMUST00000175989	miRNA		11	1	115795824	63
ENSMUSG00000077415	snoRNA	Gm23748	ENSMUST00000104227	snoRNA		9	1	82247848	131
ENSMUSG00000077469	snoRNA	Gm25922	ENSMUST00000104281	snoRNA		7	-1	34943985	130
ENSMUSG00000064532	snRNA	Gm23614	ENSMUST00000082598	snRNA		7	1	122265094	107
ENSMUSG00000088929	snoRNA	Gm24299	ENSMUST00000158304	snoRNA		9	1	15314074	71
ENSMUSG00000092880	miRNA	Mir3471-1	ENSMUST00000175139	miRNA		4	-1	10845630	131
ENSMUSG00000099332	misc_RNA	Gm27502	ENSMUST00000183495	misc_RNA		17	1	85618067	199
ENSMUSG00000094369	snRNA	Gm26057	ENSMUST00000178099	snRNA		17	-1	7374357	165
ENSMUSG00000076460	miRNA	Mir744	ENSMUST00000103261	miRNA		11	-1	65734832	100
ENSMUSG00000092948	miRNA	Gm23393	ENSMUST00000175207	miRNA		1	-1	116394413	72
ENSMUSG00000064587	snRNA	Gm25131	ENSMUST00000082653	snRNA		15	1	81039643	151
ENSMUSG00000106587	miRNA	Gm47311	ENSMUST00000198228	miRNA		3	1	96239868	138
ENSMUSG00000096359	snoRNA	Gm25710	ENSMUST00000178367	snoRNA		7	-1	59613954	79
ENSMUSG00000094060	snoRNA	Gm25157	ENSMUST00000178914	snoRNA		7	-1	59779343	94
ENSMUSG00000093133	miRNA	Gm25994	ENSMUST00000175392	miRNA		11	-1	106783271	101
ENSMUSG00000077148	snRNA	Gm22935	ENSMUST00000103960	snRNA		3	-1	89098013	104
ENSMUSG00000089118	misc_RNA	Gm25902	ENSMUST00000158493	misc_RNA		16	-1	36512650	318
ENSMUSG00000077492	snoRNA	Gm23596	ENSMUST00000104304	snoRNA		14	-1	55161608	132
ENSMUSG00000094866	miRNA	Gm25947	ENSMUST00000180343	miRNA		7	1	26531184	110
ENSMUSG00000089425	snoRNA	Gm26006	ENSMUST00000158800	snoRNA		14	-1	98260825	81
ENSMUSG00000080348	miRNA	Gm24591	ENSMUST00000116698	miRNA		8	1	44039250	112
ENSMUSG00000095731	snRNA	Gm25312	ENSMUST00000178972	snRNA		1	-1	178028139	107
ENSMUSG00000093105	miRNA	Gm25535	ENSMUST00000175364	miRNA		6	-1	117935593	125
ENSMUSG00000065813	rRNA	n-R5s3	ENSMUST00000083879	rRNA		X	-1	13215809	112
ENSMUSG00000088237	snRNA	Gm25424	ENSMUST00000157612	snRNA		7	-1	108120527	58
ENSMUSG00000094807	miRNA	Gm24975	ENSMUST00000178492	miRNA		1	1	183074606	101
ENSMUSG00000065104	snRNA	Gm26128	ENSMUST00000083170	snRNA		11	1	65626394	110
ENSMUSG00000096894	miRNA	Mir467a-10	ENSMUST00000179320	miRNA		2	1	10503273	83
ENSMUSG00000098820	miRNA	Gm27284	ENSMUST00000184357	miRNA		12	-1	59237176	70
ENSMUSG00000088004	rRNA	Gm24786	ENSMUST00000157379	rRNA		3	-1	9829728	109
ENSMUSG00000089211	snRNA	Gm23387	ENSMUST00000158586	snRNA		13	-1	45486330	107
ENSMUSG00000088303	snoRNA	Gm23382	ENSMUST00000157678	snoRNA		4	1	118164078	104
ENSMUSG00000105982	miRNA	Mir6896	ENSMUST00000198033	miRNA		1	1	34117359	73
ENSMUSG00000087739	scaRNA	Gm24644	ENSMUST00000157114	scaRNA		2	1	104040669	139
ENSMUSG00000088744	snoRNA	Gm23223	ENSMUST00000158119	snoRNA		10	1	59195699	127
ENSMUSG00000105236	miRNA	Gm44356	ENSMUST00000196731	miRNA		15	1	101888397	111
ENSMUSG00000087885	snoRNA	Gm23600	ENSMUST00000157260	snoRNA		12	1	109643748	71
ENSMUSG00000077461	snRNA	Gm26420	ENSMUST00000104273	snRNA		3	1	79834933	103
ENSMUSG00000088037	snoRNA	Gm24992	ENSMUST00000157412	snoRNA		8	1	25631950	130
ENSMUSG00000089040	ribozyme	Gm26174	ENSMUST00000158415	ribozyme		X	1	82178454	219
ENSMUSG00000093341	miRNA	Gm26116	ENSMUST00000175600	miRNA		11	-1	54658573	77
ENSMUSG00000064801	snRNA	Gm24035	ENSMUST00000082867	snRNA		8	-1	118426599	107
ENSMUSG00000065653	snoRNA	Gm23105	ENSMUST00000083719	snoRNA		10	1	108363665	134
ENSMUSG00000105215	miRNA	Gm44326	ENSMUST00000198226	miRNA		12	-1	37001939	101
ENSMUSG00000094456	miRNA	Gm22625	ENSMUST00000175382	miRNA		4	-1	98557865	126
ENSMUSG00000099141	miRNA	Mir6352	ENSMUST00000184495	miRNA		1	-1	77496768	116
ENSMUSG00000088713	snoRNA	Gm22729	ENSMUST00000158088	snoRNA		9	-1	119306757	129
ENSMUSG00000099331	miRNA	Mir7239	ENSMUST00000183384	miRNA		11	1	46170087	57
ENSMUSG00000077143	snoRNA	Gm22936	ENSMUST00000103955	snoRNA		2	1	162757309	126
ENSMUSG00000088740	snoRNA	Gm23220	ENSMUST00000158115	snoRNA		15	-1	80458174	137
ENSMUSG00000088506	snRNA	Gm24409	ENSMUST00000157881	snRNA		2	-1	122385640	152
ENSMUSG00000064612	snoRNA	Gm26457	ENSMUST00000082678	snoRNA		1	1	63178677	78
ENSMUSG00000077756	snoRNA	Snord90	ENSMUST00000104568	snoRNA		2	-1	37400157	111
ENSMUSG00000094275	snRNA	Gm22290	ENSMUST00000177655	snRNA		14	1	105250010	107
ENSMUSG00000094579	snRNA	Gm23552	ENSMUST00000178922	snRNA		6	1	130176753	74
ENSMUSG00000065640	snoRNA	Snord1c	ENSMUST00000083706	snoRNA		11	1	116672506	76
ENSMUSG00000088840	snoRNA	Gm26358	ENSMUST00000158215	snoRNA		3	1	116466619	97
ENSMUSG00000065609	miRNA	Mir7-2	ENSMUST00000083675	miRNA		7	1	78888277	97
ENSMUSG00000096673	miRNA	Gm24520	ENSMUST00000179510	miRNA		7	1	17610766	110
ENSMUSG00000088058	snoRNA	Gm26153	ENSMUST00000157433	snoRNA		16	1	84737350	127
ENSMUSG00000080655	miRNA	Gm24482	ENSMUST00000117005	miRNA		10	1	3425023	93
ENSMUSG00000088961	snRNA	Gm22089	ENSMUST00000158336	snRNA		1	-1	93808671	102
ENSMUSG00000080539	snRNA	Gm25542	ENSMUST00000116889	snRNA		1	-1	68385035	94
ENSMUSG00000064417	snoRNA	DQ267102	ENSMUST00000082483	snoRNA		12	1	109656345	72
ENSMUSG00000095924	snoRNA	Gm24040	ENSMUST00000179786	snoRNA		7	-1	59557805	79
ENSMUSG00000070130	miRNA	Mir328	ENSMUST00000093622	miRNA		8	-1	105308460	97
ENSMUSG00000065907	snRNA	Gm26108	ENSMUST00000083973	snRNA		X	-1	110623022	191
ENSMUSG00000096492	miRNA	Mir467a-4	ENSMUST00000179923	miRNA		2	1	10486135	83
ENSMUSG00000099124	miRNA	Mir8117	ENSMUST00000184773	miRNA		5	1	50252762	107
ENSMUSG00000089127	snoRNA	Gm26401	ENSMUST00000158502	snoRNA		X	1	7229775	76
ENSMUSG00000089004	rRNA	Gm23857	ENSMUST00000158379	rRNA		19	-1	48240645	111
ENSMUSG00000089471	snRNA	Gm25367	ENSMUST00000158846	snRNA		X	-1	164268176	106
ENSMUSG00000065944	snRNA	Rnu2-10	ENSMUST00000084010	snRNA		11	1	101658238	191
ENSMUSG00000065091	snRNA	Gm23678	ENSMUST00000083157	snRNA		X	-1	19762774	107
ENSMUSG00000077483	snoRNA	Gm25273	ENSMUST00000104295	snoRNA		9	-1	37172994	115
ENSMUSG00000096185	snoRNA	Gm23305	ENSMUST00000179342	snoRNA		7	-1	59537206	79
ENSMUSG00000098252	miRNA	Mir6361	ENSMUST00000185079	miRNA		18	-1	32880673	101
ENSMUSG00000087878	snRNA	Gm26105	ENSMUST00000157253	snRNA		6	1	136281227	190
ENSMUSG00000093279	miRNA	Gm26238	ENSMUST00000175538	miRNA		5	1	3652544	117
ENSMUSG00000064857	rRNA	n-R5s25	ENSMUST00000082923	rRNA		18	1	34647400	119
ENSMUSG00000089324	miRNA	Mir1936	ENSMUST00000158699	miRNA		12	-1	102685020	93
ENSMUSG00000106014	miRNA	Gm47315	ENSMUST00000195891	miRNA		11	-1	104425300	145
ENSMUSG00000094357	miRNA	Gm25570	ENSMUST00000179099	miRNA		6	1	105399719	80
ENSMUSG00000087789	snRNA	Gm23166	ENSMUST00000157164	snRNA		2	-1	71450614	101
ENSMUSG00000087715	snoRNA	Gm25826	ENSMUST00000157090	snoRNA		18	-1	32622056	137
ENSMUSG00000092715	rRNA	Gm22853	ENSMUST00000174974	rRNA		19	-1	35605804	131
ENSMUSG00000095396	snRNA	Gm25618	ENSMUST00000179484	snRNA		17	-1	24362544	107
ENSMUSG00000084691	snoRNA	Gm24895	ENSMUST00000122742	snoRNA		12	1	109646129	74
ENSMUSG00000087813	snoRNA	Gm22490	ENSMUST00000157188	snoRNA		5	-1	21117201	119
ENSMUSG00000089372	snRNA	Gm22139	ENSMUST00000158747	snRNA		X	1	127327490	105
ENSMUSG00000095281	snRNA	Gm22549	ENSMUST00000178461	snRNA		1	-1	87341561	107
ENSMUSG00000089464	snoRNA	Gm23703	ENSMUST00000158839	snoRNA		6	1	97790512	143
ENSMUSG00000064618	rRNA	n-R5s95	ENSMUST00000082684	rRNA		8	-1	9568249	118
ENSMUSG00000064380	snoRNA	Gm26448	ENSMUST00000082446	snoRNA		9	1	120129351	203
ENSMUSG00000094972	snRNA	Gm25254	ENSMUST00000157239	snRNA		16	-1	36312896	104
ENSMUSG00000099308	miRNA	Mir6367	ENSMUST00000183385	miRNA		16	-1	91527544	102
ENSMUSG00000065411	miRNA	Mir195a	ENSMUST00000083477	miRNA		11	1	70235042	94
ENSMUSG00000065714	snRNA	Gm25652	ENSMUST00000083780	snRNA		15	1	5035360	103
ENSMUSG00000094977	snRNA	Gm25256	ENSMUST00000177746	snRNA		10	1	19782854	107
ENSMUSG00000089338	misc_RNA	Gm22262	ENSMUST00000158713	misc_RNA		4	1	78670147	86
ENSMUSG00000088635	snoRNA	Gm22315	ENSMUST00000158010	snoRNA		9	1	74782070	143
ENSMUSG00000087801	misc_RNA	Gm25980	ENSMUST00000157176	misc_RNA		9	1	54537185	218
ENSMUSG00000077292	snoRNA	Gm25408	ENSMUST00000104104	snoRNA		12	1	31057075	133
ENSMUSG00000065553	miRNA	Mir103-1	ENSMUST00000083619	miRNA		11	1	35782396	86
ENSMUSG00000094998	snoRNA	Gm22050	ENSMUST00000178442	snoRNA		7	-1	59559677	79
ENSMUSG00000094032	snoRNA	Gm24654	ENSMUST00000180315	snoRNA		7	-1	59546565	79
ENSMUSG00000106514	miRNA	Mir6976	ENSMUST00000199897	miRNA		17	-1	46553889	63
ENSMUSG00000077582	snRNA	Gm24374	ENSMUST00000104394	snRNA		10	1	8642934	106
ENSMUSG00000088134	snoRNA	Gm22310	ENSMUST00000157509	snoRNA		2	1	142786896	116
ENSMUSG00000092867	miRNA	Mir3058	ENSMUST00000175126	miRNA		10	-1	95559321	91
ENSMUSG00000065022	snoRNA	AF357341	ENSMUST00000083088	snoRNA		12	1	109681519	75
ENSMUSG00000104656	miRNA	Gm44483	ENSMUST00000197203	miRNA		5	1	4802457	97
ENSMUSG00000098432	miRNA	Gm27493	ENSMUST00000184128	miRNA		11	-1	69505435	78
ENSMUSG00000099059	miRNA	Mir7676-2	ENSMUST00000183523	miRNA		15	1	78348599	62
ENSMUSG00000088570	snRNA	Gm24531	ENSMUST00000157945	snRNA		3	-1	57922187	100
ENSMUSG00000088575	snRNA	Gm24537	ENSMUST00000157950	snRNA		7	1	4738832	102
ENSMUSG00000065265	snoRNA	Gm23455	ENSMUST00000083331	snoRNA		9	1	15316489	100
ENSMUSG00000098694	miRNA	Gm27506	ENSMUST00000184558	miRNA		14	-1	13778151	80
ENSMUSG00000080391	miRNA	Gm23785	ENSMUST00000116741	miRNA		1	-1	29361370	96
ENSMUSG00000104836	miRNA	Gm44405	ENSMUST00000198952	miRNA		5	1	143157177	126
ENSMUSG00000076145	miRNA	Mir679	ENSMUST00000102191	miRNA		12	1	109715577	74
ENSMUSG00000095221	snoRNA	Gm23561	ENSMUST00000179812	snoRNA		8	-1	21326639	92
ENSMUSG00000088941	snoRNA	Gm23261	ENSMUST00000158316	snoRNA		2	-1	151372498	136
ENSMUSG00000094631	snoRNA	Gm24220	ENSMUST00000177753	snoRNA		7	-1	59357099	79
ENSMUSG00000084702	snoRNA	Gm22986	ENSMUST00000122753	snoRNA		8	1	43377975	130
ENSMUSG00000098828	misc_RNA	Gm27283	ENSMUST00000184853	misc_RNA		17	1	85614960	323
ENSMUSG00000088244	snoRNA	Gm25909	ENSMUST00000157619	snoRNA		17	-1	3057919	121
ENSMUSG00000087776	snoRNA	Gm22322	ENSMUST00000157151	snoRNA		3	-1	132787335	111
ENSMUSG00000105546	miRNA	Mir669a-4	ENSMUST00000198665	miRNA		2	1	10479315	87
ENSMUSG00000077578	snoRNA	Gm25631	ENSMUST00000104390	snoRNA		13	-1	105223398	130
ENSMUSG00000098558	miRNA	Mir7049	ENSMUST00000183983	miRNA		7	-1	28560984	60
ENSMUSG00000088670	snoRNA	Gm23663	ENSMUST00000158045	snoRNA		11	1	119746401	80
ENSMUSG00000065202	snoRNA	Gm24615	ENSMUST00000083268	snoRNA		9	1	70475484	113
ENSMUSG00000099193	miRNA	Gm27374	ENSMUST00000183660	miRNA		11	-1	100442475	81
ENSMUSG00000084584	rRNA	n-R5s15	ENSMUST00000122635	rRNA		X	1	152304001	111
ENSMUSG00000099328	misc_RNA	Gm28011	ENSMUST00000184097	misc_RNA		15	1	102949434	175
ENSMUSG00000093413	snoRNA	Snora15	ENSMUST00000177461	snoRNA		5	1	129794546	131
ENSMUSG00000096851	snRNA	Gm22756	ENSMUST00000180118	snRNA		1	-1	151062110	107
ENSMUSG00000093335	miRNA	Gm22119	ENSMUST00000175594	miRNA		Y	-1	2446108	99
ENSMUSG00000098891	misc_RNA	Gm27753	ENSMUST00000184742	misc_RNA		10	-1	92103909	203
ENSMUSG00000098714	miRNA	Mir7663	ENSMUST00000183950	miRNA		10	-1	22729432	61
ENSMUSG00000064419	snRNA	Gm22249	ENSMUST00000082485	snRNA		5	1	38546458	136
ENSMUSG00000064909	snRNA	Gm25401	ENSMUST00000082975	snRNA		9	-1	41339541	106
ENSMUSG00000096994	protein_coding	Ppp1ca	ENSMUST00000180575	protein_coding		CHR_MG153_PATCH	1	4192064	1473
ENSMUSG00000096994	protein_coding	Ppp1ca	ENSMUST00000237040	processed_transcript		CHR_MG153_PATCH	1	4192158	436
ENSMUSG00000096994	protein_coding	Ppp1ca	ENSMUST00000237427	retained_intron		CHR_MG153_PATCH	1	4192172	938
ENSMUSG00000096994	protein_coding	Ppp1ca	ENSMUST00000237065	retained_intron		CHR_MG153_PATCH	1	4192203	808
ENSMUSG00000096994	protein_coding	Ppp1ca	ENSMUST00000235905	processed_transcript		CHR_MG153_PATCH	1	4192432	1318
ENSMUSG00000096994	protein_coding	Ppp1ca	ENSMUST00000235379	retained_intron		CHR_MG153_PATCH	1	4193676	613
ENSMUSG00000096994	protein_coding	Ppp1ca	ENSMUST00000236173	retained_intron		CHR_MG153_PATCH	1	4193707	601
ENSMUSG00000096994	protein_coding	Ppp1ca	ENSMUST00000238152	retained_intron		CHR_MG153_PATCH	1	4194648	375
ENSMUSG00000097064	protein_coding	Carns1	ENSMUST00000237517	protein_coding		CHR_MG153_PATCH	-1	4170027	2371
ENSMUSG00000097064	protein_coding	Carns1	ENSMUST00000181869	protein_coding		CHR_MG153_PATCH	-1	4175478	3968
ENSMUSG00000097064	protein_coding	Carns1	ENSMUST00000235673	retained_intron		CHR_MG153_PATCH	-1	4175453	3762
ENSMUSG00000097064	protein_coding	Carns1	ENSMUST00000236325	processed_transcript		CHR_MG153_PATCH	-1	4169414	457
ENSMUSG00000097064	protein_coding	Carns1	ENSMUST00000235565	retained_intron		CHR_MG153_PATCH	-1	4171455	466
ENSMUSG00000097064	protein_coding	Carns1	ENSMUST00000237159	processed_transcript		CHR_MG153_PATCH	-1	4171876	607
ENSMUSG00000097064	protein_coding	Carns1	ENSMUST00000237643	retained_intron		CHR_MG153_PATCH	-1	4175478	471
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000180660	protein_coding		CHR_MG153_PATCH	1	4099998	4206
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000181744	retained_intron		CHR_MG153_PATCH	1	4100046	4981
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000181798	protein_coding		CHR_MG153_PATCH	1	4100269	1043
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000181715	protein_coding		CHR_MG153_PATCH	1	4100622	4512
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000180607	retained_intron		CHR_MG153_PATCH	1	4108204	662
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000181681	retained_intron		CHR_MG153_PATCH	1	4109648	589
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000180760	nonsense_mediated_decay		CHR_MG153_PATCH	1	4109927	772
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000236746	retained_intron		CHR_MG153_PATCH	1	4110714	462
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000181372	retained_intron		CHR_MG153_PATCH	1	4110800	656
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000180675	retained_intron		CHR_MG153_PATCH	1	4111161	733
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000235866	retained_intron		CHR_MG153_PATCH	1	4111678	729
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000181069	nonsense_mediated_decay		CHR_MG153_PATCH	1	4111929	766
ENSMUSG00000097096	protein_coding	Pitpnm1	ENSMUST00000181468	retained_intron		CHR_MG153_PATCH	1	4112320	1038
ENSMUSG00000097132	protein_coding	Ptprcap	ENSMUST00000235844	protein_coding		CHR_MG153_PATCH	1	4153603	1082
ENSMUSG00000097132	protein_coding	Ptprcap	ENSMUST00000180710	protein_coding		CHR_MG153_PATCH	1	4154605	927
ENSMUSG00000097319	protein_coding	Aip	ENSMUST00000181243	protein_coding		CHR_MG153_PATCH	-1	4125858	1378
ENSMUSG00000097319	protein_coding	Aip	ENSMUST00000180758	protein_coding		CHR_MG153_PATCH	-1	4121575	1261
ENSMUSG00000097319	protein_coding	Aip	ENSMUST00000181061	protein_coding		CHR_MG153_PATCH	-1	4125848	700
ENSMUSG00000097319	protein_coding	Aip	ENSMUST00000237616	retained_intron		CHR_MG153_PATCH	-1	4121458	357
ENSMUSG00000097319	protein_coding	Aip	ENSMUST00000180814	processed_transcript		CHR_MG153_PATCH	-1	4124564	347
ENSMUSG00000097319	protein_coding	Aip	ENSMUST00000180644	retained_intron		CHR_MG153_PATCH	-1	4125790	674
ENSMUSG00000097394	protein_coding	Tmem134	ENSMUST00000213476	protein_coding		CHR_MG153_PATCH	1	4125987	3701
ENSMUSG00000097394	protein_coding	Tmem134	ENSMUST00000181375	protein_coding		CHR_MG153_PATCH	1	4125987	876
ENSMUSG00000097394	protein_coding	Tmem134	ENSMUST00000230764	protein_coding		CHR_MG153_PATCH	1	4125987	3701
ENSMUSG00000097394	protein_coding	Tmem134	ENSMUST00000230611	protein_coding		CHR_MG153_PATCH	1	4125987	876
ENSMUSG00000097485	protein_coding	Cdk2ap2	ENSMUST00000180435	protein_coding		CHR_MG153_PATCH	1	4097182	1080
ENSMUSG00000097485	protein_coding	Cdk2ap2	ENSMUST00000180956	protein_coding		CHR_MG153_PATCH	1	4097401	669
ENSMUSG00000097485	protein_coding	Cdk2ap2	ENSMUST00000181040	processed_transcript		CHR_MG153_PATCH	1	4097401	1089
ENSMUSG00000097485	protein_coding	Cdk2ap2	ENSMUST00000181806	protein_coding		CHR_MG153_PATCH	1	4097402	386
ENSMUSG00000097485	protein_coding	Cdk2ap2	ENSMUST00000181684	nonsense_mediated_decay		CHR_MG153_PATCH	1	4097402	843
ENSMUSG00000097508	protein_coding	Pold4	ENSMUST00000180621	protein_coding		CHR_MG153_PATCH	1	4231898	913
ENSMUSG00000097508	protein_coding	Pold4	ENSMUST00000235506	protein_coding		CHR_MG153_PATCH	1	4231985	631
ENSMUSG00000097508	protein_coding	Pold4	ENSMUST00000235944	protein_coding		CHR_MG153_PATCH	1	4232437	645
ENSMUSG00000097512	miRNA	Gm26115	ENSMUST00000181946	miRNA		CHR_MG153_PATCH	-1	4215487	87
ENSMUSG00000097556	lncRNA	Gm17552	ENSMUST00000181675	lncRNA		CHR_MG153_PATCH	1	4169565	3877
ENSMUSG00000097629	protein_coding	Clcf1	ENSMUST00000180925	protein_coding		CHR_MG153_PATCH	1	4214237	1847
ENSMUSG00000097629	protein_coding	Clcf1	ENSMUST00000180402	retained_intron		CHR_MG153_PATCH	1	4214263	3550
ENSMUSG00000097629	protein_coding	Clcf1	ENSMUST00000181917	nonsense_mediated_decay		CHR_MG153_PATCH	1	4214304	1878
ENSMUSG00000097629	protein_coding	Clcf1	ENSMUST00000236923	protein_coding		CHR_MG153_PATCH	1	4214388	380
ENSMUSG00000097629	protein_coding	Clcf1	ENSMUST00000180776	processed_transcript		CHR_MG153_PATCH	1	4214593	646
ENSMUSG00000097663	protein_coding	Gstp3	ENSMUST00000188771	protein_coding		CHR_MG153_PATCH	-1	4059446	708
ENSMUSG00000097663	protein_coding	Gstp3	ENSMUST00000180628	protein_coding		CHR_MG153_PATCH	-1	4059295	685
ENSMUSG00000097663	protein_coding	Gstp3	ENSMUST00000235758	processed_transcript		CHR_MG153_PATCH	-1	4059569	453
ENSMUSG00000097663	protein_coding	Gstp3	ENSMUST00000236034	processed_transcript		CHR_MG153_PATCH	-1	4059461	305
ENSMUSG00000097687	protein_coding	Cabp4	ENSMUST00000237023	retained_intron		CHR_MG153_PATCH	-1	4139562	2719
ENSMUSG00000097687	protein_coding	Cabp4	ENSMUST00000181080	protein_coding		CHR_MG153_PATCH	-1	4139608	1433
ENSMUSG00000097687	protein_coding	Cabp4	ENSMUST00000237409	retained_intron		CHR_MG153_PATCH	-1	4144032	3372
ENSMUSG00000097687	protein_coding	Cabp4	ENSMUST00000236228	retained_intron		CHR_MG153_PATCH	-1	4139325	725
ENSMUSG00000097708	protein_coding	Tbc1d10c	ENSMUST00000235394	nonsense_mediated_decay		CHR_MG153_PATCH	-1	4190927	2699
ENSMUSG00000097708	protein_coding	Tbc1d10c	ENSMUST00000237614	protein_coding		CHR_MG153_PATCH	-1	4191283	1996
ENSMUSG00000097708	protein_coding	Tbc1d10c	ENSMUST00000237168	nonsense_mediated_decay		CHR_MG153_PATCH	-1	4191283	2154
ENSMUSG00000097708	protein_coding	Tbc1d10c	ENSMUST00000236035	retained_intron		CHR_MG153_PATCH	-1	4185531	878
ENSMUSG00000097708	protein_coding	Tbc1d10c	ENSMUST00000236555	processed_transcript		CHR_MG153_PATCH	-1	4187419	993
ENSMUSG00000097708	protein_coding	Tbc1d10c	ENSMUST00000236966	nonsense_mediated_decay		CHR_MG153_PATCH	-1	4190836	1589
ENSMUSG00000097708	protein_coding	Tbc1d10c	ENSMUST00000236093	protein_coding		CHR_MG153_PATCH	-1	4191046	1316
ENSMUSG00000097708	protein_coding	Tbc1d10c	ENSMUST00000181228	protein_coding		CHR_MG153_PATCH	-1	4191027	1658
ENSMUSG00000097708	protein_coding	Tbc1d10c	ENSMUST00000236671	retained_intron		CHR_MG153_PATCH	-1	4190836	2102
ENSMUSG00000097708	protein_coding	Tbc1d10c	ENSMUST00000235894	nonsense_mediated_decay		CHR_MG153_PATCH	-1	4190832	1473
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000181245	protein_coding		CHR_MG153_PATCH	-1	4163353	4586
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000181415	nonsense_mediated_decay		CHR_MG153_PATCH	-1	4163295	1753
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000181544	retained_intron		CHR_MG153_PATCH	-1	4158151	678
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000181844	nonsense_mediated_decay		CHR_MG153_PATCH	-1	4163299	1979
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000181753	retained_intron		CHR_MG153_PATCH	-1	4163315	2090
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000181386	processed_transcript		CHR_MG153_PATCH	-1	4162329	1143
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000180903	nonsense_mediated_decay		CHR_MG153_PATCH	-1	4163284	1418
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000181559	protein_coding		CHR_MG153_PATCH	-1	4163284	1409
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000237941	nonsense_mediated_decay		CHR_MG153_PATCH	-1	4163273	693
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000181853	protein_coding		CHR_MG153_PATCH	-1	4163299	642
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000180873	retained_intron		CHR_MG153_PATCH	-1	4163329	411
ENSMUSG00000097721	protein_coding	Rps6kb2	ENSMUST00000180827	processed_transcript		CHR_MG153_PATCH	-1	4163353	235
ENSMUSG00000097733	protein_coding	Cabp2	ENSMUST00000181589	protein_coding		CHR_MG153_PATCH	1	4081578	387
ENSMUSG00000097733	protein_coding	Cabp2	ENSMUST00000180578	protein_coding		CHR_MG153_PATCH	1	4082488	1030
ENSMUSG00000097733	protein_coding	Cabp2	ENSMUST00000180694	protein_coding		CHR_MG153_PATCH	1	4083490	781
ENSMUSG00000097733	protein_coding	Cabp2	ENSMUST00000180961	protein_coding		CHR_MG153_PATCH	1	4083519	911
ENSMUSG00000097733	protein_coding	Cabp2	ENSMUST00000181024	processed_transcript		CHR_MG153_PATCH	1	4086475	243
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000180620	protein_coding		CHR_MG153_PATCH	1	4148618	625
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000181494	protein_coding		CHR_MG153_PATCH	1	4148618	1888
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000180891	retained_intron		CHR_MG153_PATCH	1	4148627	322
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000181909	retained_intron		CHR_MG153_PATCH	1	4148631	384
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000236389	protein_coding		CHR_MG153_PATCH	1	4148631	854
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000235175	nonsense_mediated_decay		CHR_MG153_PATCH	1	4148653	1709
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000236505	retained_intron		CHR_MG153_PATCH	1	4148656	2814
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000180605	processed_transcript		CHR_MG153_PATCH	1	4148660	736
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000181861	retained_intron		CHR_MG153_PATCH	1	4148663	563
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000236975	retained_intron		CHR_MG153_PATCH	1	4148666	771
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000180560	retained_intron		CHR_MG153_PATCH	1	4150542	737
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000181608	retained_intron		CHR_MG153_PATCH	1	4151369	552
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000181219	retained_intron		CHR_MG153_PATCH	1	4151579	852
ENSMUSG00000097771	protein_coding	Coro1b	ENSMUST00000236852	retained_intron		CHR_MG153_PATCH	1	4153061	550
ENSMUSG00000097808	protein_coding	Gstp2	ENSMUST00000181010	protein_coding		CHR_MG153_PATCH	-1	4042263	797
ENSMUSG00000097808	protein_coding	Gstp2	ENSMUST00000235441	retained_intron		CHR_MG153_PATCH	-1	4040883	429
ENSMUSG00000097808	protein_coding	Gstp2	ENSMUST00000236543	retained_intron		CHR_MG153_PATCH	-1	4041528	488
ENSMUSG00000097808	protein_coding	Gstp2	ENSMUST00000237054	protein_coding		CHR_MG153_PATCH	-1	4046023	436
ENSMUSG00000097808	protein_coding	Gstp2	ENSMUST00000238033	protein_coding		CHR_MG153_PATCH	-1	4045992	509
ENSMUSG00000097808	protein_coding	Gstp2	ENSMUST00000237573	protein_coding		CHR_MG153_PATCH	-1	4042218	321
ENSMUSG00000097830	protein_coding	Gstp1	ENSMUST00000180480	protein_coding		CHR_MG153_PATCH	-1	4037985	821
ENSMUSG00000097830	protein_coding	Gstp1	ENSMUST00000236288	retained_intron		CHR_MG153_PATCH	-1	4035993	423
ENSMUSG00000097830	protein_coding	Gstp1	ENSMUST00000237349	protein_coding		CHR_MG153_PATCH	-1	4037977	806
ENSMUSG00000097830	protein_coding	Gstp1	ENSMUST00000236400	processed_transcript		CHR_MG153_PATCH	-1	4036382	460
ENSMUSG00000097830	protein_coding	Gstp1	ENSMUST00000235396	protein_coding		CHR_MG153_PATCH	-1	4037925	670
ENSMUSG00000097830	protein_coding	Gstp1	ENSMUST00000235875	retained_intron		CHR_MG153_PATCH	-1	4037901	819
ENSMUSG00000097830	protein_coding	Gstp1	ENSMUST00000236189	retained_intron		CHR_MG153_PATCH	-1	4037896	532
ENSMUSG00000097830	protein_coding	Gstp1	ENSMUST00000235861	retained_intron		CHR_MG153_PATCH	-1	4037877	709
ENSMUSG00000097830	protein_coding	Gstp1	ENSMUST00000236796	retained_intron		CHR_MG153_PATCH	-1	4037899	472
ENSMUSG00000097846	snoRNA	Gm23927	ENSMUST00000181407	snoRNA		CHR_MG153_PATCH	-1	4078512	215
ENSMUSG00000097905	protein_coding	Gpr152	ENSMUST00000181548	protein_coding		CHR_MG153_PATCH	1	4139786	3936
ENSMUSG00000097909	protein_coding	Rad9a	ENSMUST00000181329	protein_coding		CHR_MG153_PATCH	-1	4201635	2081
ENSMUSG00000097909	protein_coding	Rad9a	ENSMUST00000236223	retained_intron		CHR_MG153_PATCH	-1	4201606	2101
ENSMUSG00000097909	protein_coding	Rad9a	ENSMUST00000237610	protein_coding		CHR_MG153_PATCH	-1	4201661	475
ENSMUSG00000097909	protein_coding	Rad9a	ENSMUST00000237160	retained_intron		CHR_MG153_PATCH	-1	4200497	644
ENSMUSG00000097909	protein_coding	Rad9a	ENSMUST00000235349	retained_intron		CHR_MG153_PATCH	-1	4200317	399
ENSMUSG00000097909	protein_coding	Rad9a	ENSMUST00000237373	retained_intron		CHR_MG153_PATCH	-1	4201613	710
ENSMUSG00000097909	protein_coding	Rad9a	ENSMUST00000237588	nonsense_mediated_decay		CHR_MG153_PATCH	-1	4201593	730
ENSMUSG00000097909	protein_coding	Rad9a	ENSMUST00000237914	protein_coding		CHR_MG153_PATCH	-1	4201626	544
ENSMUSG00000098512	transcribed_unprocessed_pseudogene	Nlrp4g	ENSMUST00000183688	transcribed_unprocessed_pseudogene		CHR_MG132_PATCH	-1	124363459	2030
ENSMUSG00000098512	transcribed_unprocessed_pseudogene	Nlrp4g	ENSMUST00000214338	processed_transcript		CHR_MG132_PATCH	-1	124362428	655
ENSMUSG00000098512	transcribed_unprocessed_pseudogene	Nlrp4g	ENSMUST00000214489	processed_transcript		CHR_MG132_PATCH	-1	124362088	687
ENSMUSG00000098810	protein_coding	2010315B03Rik	ENSMUST00000184117	protein_coding		CHR_MG132_PATCH	-1	124312696	2623
ENSMUSG00000098810	protein_coding	2010315B03Rik	ENSMUST00000184310	protein_coding		CHR_MG132_PATCH	-1	124312642	795
ENSMUSG00000098810	protein_coding	2010315B03Rik	ENSMUST00000191281	protein_coding		CHR_MG132_PATCH	-1	124311899	683
ENSMUSG00000098810	protein_coding	2010315B03Rik	ENSMUST00000189658	protein_coding		CHR_MG132_PATCH	-1	124312671	634
ENSMUSG00000098810	protein_coding	2010315B03Rik	ENSMUST00000187111	processed_transcript		CHR_MG132_PATCH	-1	124312671	1179
ENSMUSG00000099077	protein_coding	Ppp2r3d	ENSMUST00000216080	protein_coding		CHR_MG132_PATCH	-1	124456352	2557
ENSMUSG00000099077	protein_coding	Ppp2r3d	ENSMUST00000187919	protein_coding		CHR_MG132_PATCH	-1	124456316	777
ENSMUSG00000099077	protein_coding	Ppp2r3d	ENSMUST00000216763	protein_coding		CHR_MG132_PATCH	-1	124457712	353
ENSMUSG00000099077	protein_coding	Ppp2r3d	ENSMUST00000186956	protein_coding		CHR_MG132_PATCH	-1	124457714	385
ENSMUSG00000099077	protein_coding	Ppp2r3d	ENSMUST00000214188	retained_intron		CHR_MG132_PATCH	-1	124460522	766
ENSMUSG00000099077	protein_coding	Ppp2r3d	ENSMUST00000184298	protein_coding		CHR_MG132_PATCH	-1	124460551	422
ENSMUSG00000099077	protein_coding	Ppp2r3d	ENSMUST00000184929	protein_coding		CHR_MG132_PATCH	-1	124462462	450
ENSMUSG00000099077	protein_coding	Ppp2r3d	ENSMUST00000187499	protein_coding		CHR_MG132_PATCH	-1	124461891	556
ENSMUSG00000105417	snoRNA	Gm23927	ENSMUST00000199691	snoRNA		CHR_MG153_PATCH	-1	4078512	216
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000201884	protein_coding		CHR_MG117_PATCH	1	108783796	1191
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000201111	protein_coding		CHR_MG117_PATCH	1	108783796	1708
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000202989	retained_intron		CHR_MG117_PATCH	1	108783822	2820
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000201753	retained_intron		CHR_MG117_PATCH	1	108783865	776
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000200974	nonsense_mediated_decay		CHR_MG117_PATCH	1	108783865	607
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000202524	protein_coding		CHR_MG117_PATCH	1	108783865	748
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000200916	protein_coding		CHR_MG117_PATCH	1	108795994	654
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000201336	protein_coding		CHR_MG117_PATCH	1	108795994	1846
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000201193	nonsense_mediated_decay		CHR_MG117_PATCH	1	108796064	730
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000201929	protein_coding		CHR_MG117_PATCH	1	108796131	1199
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000202106	protein_coding		CHR_MG117_PATCH	1	108796352	487
ENSMUSG00000106672	protein_coding	Ip6k2	ENSMUST00000200838	retained_intron		CHR_MG117_PATCH	1	108798187	438
ENSMUSG00000106830	snoRNA	Gm23034	ENSMUST00000200736	snoRNA		CHR_MG117_PATCH	-1	108795388	147
ENSMUSG00000106842	miRNA	Gm23156	ENSMUST00000202660	miRNA		CHR_MG117_PATCH	1	108844478	86
ENSMUSG00000107055	protein_coding	Nckipsd	ENSMUST00000202637	protein_coding		CHR_MG117_PATCH	1	108808368	3360
ENSMUSG00000107055	protein_coding	Nckipsd	ENSMUST00000201242	protein_coding		CHR_MG117_PATCH	1	108808373	467
ENSMUSG00000107055	protein_coding	Nckipsd	ENSMUST00000201685	protein_coding		CHR_MG117_PATCH	1	108808421	367
ENSMUSG00000107055	protein_coding	Nckipsd	ENSMUST00000202277	protein_coding		CHR_MG117_PATCH	1	108811925	178
ENSMUSG00000107055	protein_coding	Nckipsd	ENSMUST00000202631	retained_intron		CHR_MG117_PATCH	1	108813428	754
ENSMUSG00000107055	protein_coding	Nckipsd	ENSMUST00000201924	retained_intron		CHR_MG117_PATCH	1	108814836	1089
ENSMUSG00000107138	protein_coding	Slc26a6	ENSMUST00000201209	processed_transcript		CHR_MG117_PATCH	1	108853283	349
ENSMUSG00000107138	protein_coding	Slc26a6	ENSMUST00000202804	protein_coding		CHR_MG117_PATCH	1	108853348	4362
ENSMUSG00000107138	protein_coding	Slc26a6	ENSMUST00000202255	nonsense_mediated_decay		CHR_MG117_PATCH	1	108854037	1799
ENSMUSG00000107138	protein_coding	Slc26a6	ENSMUST00000201296	protein_coding		CHR_MG117_PATCH	1	108854037	2402
ENSMUSG00000107138	protein_coding	Slc26a6	ENSMUST00000200989	protein_coding		CHR_MG117_PATCH	1	108854043	2725
ENSMUSG00000107138	protein_coding	Slc26a6	ENSMUST00000201215	retained_intron		CHR_MG117_PATCH	1	108854074	3985
ENSMUSG00000107138	protein_coding	Slc26a6	ENSMUST00000201974	retained_intron		CHR_MG117_PATCH	1	108854094	2375
ENSMUSG00000107138	protein_coding	Slc26a6	ENSMUST00000202275	protein_coding		CHR_MG117_PATCH	1	108854135	1985
ENSMUSG00000107138	protein_coding	Slc26a6	ENSMUST00000201630	nonsense_mediated_decay		CHR_MG117_PATCH	1	108855662	1931
ENSMUSG00000107138	protein_coding	Slc26a6	ENSMUST00000201833	protein_coding		CHR_MG117_PATCH	1	108864279	418
ENSMUSG00000107174	protein_coding	Tmem89	ENSMUST00000201306	protein_coding		CHR_MG117_PATCH	1	108866488	538
ENSMUSG00000107174	protein_coding	Tmem89	ENSMUST00000201875	protein_coding		CHR_MG117_PATCH	1	108866488	945
ENSMUSG00000107235	protein_coding	Uqcrc1	ENSMUST00000202750	protein_coding		CHR_MG117_PATCH	1	108888502	1653
ENSMUSG00000107235	protein_coding	Uqcrc1	ENSMUST00000202488	protein_coding		CHR_MG117_PATCH	1	108888583	580
ENSMUSG00000107235	protein_coding	Uqcrc1	ENSMUST00000201280	nonsense_mediated_decay		CHR_MG117_PATCH	1	108888584	582
ENSMUSG00000107235	protein_coding	Uqcrc1	ENSMUST00000202097	retained_intron		CHR_MG117_PATCH	1	108888761	732
ENSMUSG00000107235	protein_coding	Uqcrc1	ENSMUST00000200772	protein_coding		CHR_MG117_PATCH	1	108893991	370
ENSMUSG00000107235	protein_coding	Uqcrc1	ENSMUST00000202718	retained_intron		CHR_MG117_PATCH	1	108898034	2473
ENSMUSG00000107235	protein_coding	Uqcrc1	ENSMUST00000201949	protein_coding		CHR_MG117_PATCH	1	108899286	486
ENSMUSG00000107235	protein_coding	Uqcrc1	ENSMUST00000201358	retained_intron		CHR_MG117_PATCH	1	108900180	497
ENSMUSG00000107269	protein_coding	Celsr3	ENSMUST00000201574	protein_coding		CHR_MG117_PATCH	1	108826320	11547
ENSMUSG00000107269	protein_coding	Celsr3	ENSMUST00000215043	protein_coding		CHR_MG117_PATCH	1	108826320	11571
ENSMUSG00000107269	protein_coding	Celsr3	ENSMUST00000202810	protein_coding		CHR_MG117_PATCH	1	108831740	722
ENSMUSG00000107269	protein_coding	Celsr3	ENSMUST00000201239	retained_intron		CHR_MG117_PATCH	1	108834472	767
ENSMUSG00000107269	protein_coding	Celsr3	ENSMUST00000201092	retained_intron		CHR_MG117_PATCH	1	108842609	524
ENSMUSG00000107269	protein_coding	Celsr3	ENSMUST00000202617	retained_intron		CHR_MG117_PATCH	1	108843235	443
ENSMUSG00000107269	protein_coding	Celsr3	ENSMUST00000202710	protein_coding		CHR_MG117_PATCH	1	108843253	1418
ENSMUSG00000107302	lncRNA	Gm35025	ENSMUST00000202267	lncRNA		CHR_MG117_PATCH	-1	108825098	455
ENSMUSG00000107302	lncRNA	Gm35025	ENSMUST00000200720	lncRNA		CHR_MG117_PATCH	-1	108824819	634
ENSMUSG00000107302	lncRNA	Gm35025	ENSMUST00000201222	TEC		CHR_MG117_PATCH	-1	108824861	695
ENSMUSG00000107342	TEC	Gm37284	ENSMUST00000201160	TEC		CHR_MG117_PATCH	-1	108902410	539
ENSMUSG00000107382	TEC	Gm37714	ENSMUST00000201714	TEC		CHR_MG117_PATCH	1	108825349	342
ENSMUSG00000110807	TEC	Gm47183	ENSMUST00000214241	TEC		CHR_MG132_PATCH	1	124451157	774
ENSMUSG00000110818	TEC	Gm42589	ENSMUST00000213241	TEC		CHR_MG171_PATCH	-1	131605405	1751
ENSMUSG00000110890	pseudogene	AC117622.1	ENSMUST00000216262	pseudogene		CHR_MG171_PATCH	-1	131346180	375
ENSMUSG00000110939	protein_coding	Auts2	ENSMUST00000214094	protein_coding		CHR_MG171_PATCH	-1	131475016	2539
ENSMUSG00000110939	protein_coding	Auts2	ENSMUST00000214906	protein_coding		CHR_MG171_PATCH	-1	131475016	2539
ENSMUSG00000110955	lncRNA	Gm47181	ENSMUST00000216662	lncRNA		CHR_MG132_PATCH	-1	124347514	398
ENSMUSG00000111007	lncRNA	Gm29681	ENSMUST00000214062	lncRNA		CHR_MG171_PATCH	-1	131414718	4233
ENSMUSG00000111099	rRNA	Gm27266	ENSMUST00000214746	rRNA		CHR_MG171_PATCH	1	131577988	123
ENSMUSG00000111150	TEC	Gm47179	ENSMUST00000213327	TEC		CHR_MG132_PATCH	-1	124342618	1836
ENSMUSG00000111402	pseudogene	AC109138.1	ENSMUST00000214250	pseudogene		CHR_MG153_PATCH	1	4074378	159
ENSMUSG00000111469	protein_coding	CAAA01144662.1	ENSMUST00000215103	protein_coding		CHR_MG132_PATCH	1	124410161	396
ENSMUSG00000111469	protein_coding	CAAA01144662.1	ENSMUST00000230797	protein_coding		CHR_MG132_PATCH	1	124410161	396
ENSMUSG00000111588	unprocessed_pseudogene	Gm47182	ENSMUST00000215012	unprocessed_pseudogene		CHR_MG132_PATCH	-1	124369881	277
ENSMUSG00000111595	transcribed_unprocessed_pseudogene	Gm47180	ENSMUST00000217300	processed_transcript		CHR_MG132_PATCH	1	124338979	802
ENSMUSG00000111595	transcribed_unprocessed_pseudogene	Gm47180	ENSMUST00000216058	transcribed_unprocessed_pseudogene		CHR_MG132_PATCH	1	124338982	610
ENSMUSG00000111595	transcribed_unprocessed_pseudogene	Gm47180	ENSMUST00000214280	processed_transcript		CHR_MG132_PATCH	1	124338982	1097
ENSMUSG00000111640	pseudogene	AC109138.2	ENSMUST00000216743	pseudogene		CHR_MG153_PATCH	-1	4061762	315
ENSMUSG00000111701	lncRNA	Gm39469	ENSMUST00000213569	lncRNA		CHR_MG132_PATCH	-1	124282139	461
ENSMUSG00000111721	unprocessed_pseudogene	Gm47185	ENSMUST00000215596	unprocessed_pseudogene		CHR_MG132_PATCH	1	124431409	643
ENSMUSG00000111835	protein_coding	CAAA01154301.1	ENSMUST00000216418	protein_coding		CHR_MG132_PATCH	-1	124467286	900
ENSMUSG00000111835	protein_coding	CAAA01154301.1	ENSMUST00000229882	protein_coding		CHR_MG132_PATCH	-1	124467286	900
ENSMUSG00000111851	protein_coding	Gm20382	ENSMUST00000215149	protein_coding		CHR_MG171_PATCH	-1	131487882	447
ENSMUSG00000111851	protein_coding	Gm20382	ENSMUST00000230343	protein_coding		CHR_MG171_PATCH	-1	131487882	447
ENSMUSG00000115864	protein_coding	Vsig1	ENSMUST00000229139	protein_coding		CHR_MG104_PATCH	1	140907608	2707
ENSMUSG00000115864	protein_coding	Vsig1	ENSMUST00000229631	processed_transcript		CHR_MG104_PATCH	1	140923189	1243
ENSMUSG00000115878	protein_coding	LT629148.1	ENSMUST00000229998	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83141789	1806
ENSMUSG00000115878	protein_coding	LT629148.1	ENSMUST00000229459	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83141789	1806
ENSMUSG00000115879	pseudogene	LT629147.1	ENSMUST00000229227	pseudogene		CHR_CAST_EI_MMCHR11_CTG4	-1	71057966	651
ENSMUSG00000115899	processed_pseudogene	Gm6088	ENSMUST00000230373	processed_pseudogene		CHR_MG104_PATCH	1	140797396	2539
ENSMUSG00000115932	pseudogene	LT629148.2	ENSMUST00000229783	pseudogene		CHR_CAST_EI_MMCHR11_CTG5	-1	82993677	159
ENSMUSG00000116006	pseudogene	LT629148.3	ENSMUST00000230272	pseudogene		CHR_CAST_EI_MMCHR11_CTG5	1	83200701	1011
ENSMUSG00000116018	protein_coding	Slfn3	ENSMUST00000229598	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83169005	1551
ENSMUSG00000116018	protein_coding	Slfn3	ENSMUST00000230078	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83169005	1176
ENSMUSG00000116018	protein_coding	Slfn3	ENSMUST00000230412	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83169005	1551
ENSMUSG00000116018	protein_coding	Slfn3	ENSMUST00000229712	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83169005	1176
ENSMUSG00000116022	protein_coding	Slfn2	ENSMUST00000229901	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83057196	1664
ENSMUSG00000116049	lncRNA	Slfn5os	ENSMUST00000230720	lncRNA		CHR_CAST_EI_MMCHR11_CTG5	-1	82960775	574
ENSMUSG00000116049	lncRNA	Slfn5os	ENSMUST00000231199	lncRNA		CHR_CAST_EI_MMCHR11_CTG5	-1	82960720	550
ENSMUSG00000116050	protein_coding	LT629148.4	ENSMUST00000229730	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	83027828	768
ENSMUSG00000116050	protein_coding	LT629148.4	ENSMUST00000228993	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	83027828	768
ENSMUSG00000116052	lncRNA	Eif2c5	ENSMUST00000231010	lncRNA		CHR_MG104_PATCH	1	140776235	1416
ENSMUSG00000116064	protein_coding	LT629148.5	ENSMUST00000231118	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	83251502	1077
ENSMUSG00000116064	protein_coding	LT629148.5	ENSMUST00000230225	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	83251502	1077
ENSMUSG00000116067	protein_coding	LT629148.6	ENSMUST00000230838	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	83236873	2697
ENSMUSG00000116067	protein_coding	LT629148.6	ENSMUST00000230880	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	83236873	2697
ENSMUSG00000116082	protein_coding	Slfn1	ENSMUST00000228957	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83108292	1864
ENSMUSG00000116108	protein_coding	LT629148.7	ENSMUST00000229257	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	82956361	2652
ENSMUSG00000116108	protein_coding	LT629148.7	ENSMUST00000230483	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	82956361	2652
ENSMUSG00000116111	processed_pseudogene	Gm15377	ENSMUST00000229069	processed_pseudogene		CHR_CAST_EI_MMCHR11_CTG4	1	71064413	246
ENSMUSG00000116128	pseudogene	LT629148.8	ENSMUST00000214305	pseudogene		CHR_CAST_EI_MMCHR11_CTG5	1	83199199	867
ENSMUSG00000116154	protein_coding	LT629148.9	ENSMUST00000229849	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	83034426	1920
ENSMUSG00000116154	protein_coding	LT629148.9	ENSMUST00000230076	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	83034426	1920
ENSMUSG00000116154	protein_coding	LT629148.9	ENSMUST00000229676	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	83033895	1251
ENSMUSG00000116154	protein_coding	LT629148.9	ENSMUST00000230371	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	83033895	1251
ENSMUSG00000116161	protein_coding	LT629147.2	ENSMUST00000230185	protein_coding		CHR_CAST_EI_MMCHR11_CTG4	-1	71388828	3360
ENSMUSG00000116161	protein_coding	LT629147.2	ENSMUST00000230098	protein_coding		CHR_CAST_EI_MMCHR11_CTG4	-1	71388828	3360
ENSMUSG00000116175	protein_coding	LT629148.10	ENSMUST00000229078	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83194842	1671
ENSMUSG00000116175	protein_coding	LT629148.10	ENSMUST00000230313	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83194842	1671
ENSMUSG00000116175	protein_coding	LT629148.10	ENSMUST00000230092	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83205394	1146
ENSMUSG00000116175	protein_coding	LT629148.10	ENSMUST00000230750	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83205394	1146
ENSMUSG00000116177	processed_pseudogene	Gm7091	ENSMUST00000230079	processed_pseudogene		CHR_MG104_PATCH	-1	140822523	586
ENSMUSG00000116200	snoRNA	Gm23266	ENSMUST00000230265	snoRNA		CHR_CAST_EI_MMCHR11_CTG4	-1	71326890	134
ENSMUSG00000116206	snoRNA	Snord7	ENSMUST00000229522	snoRNA		CHR_CAST_EI_MMCHR11_CTG5	1	83247148	97
ENSMUSG00000116214	protein_coding	LT629147.3	ENSMUST00000229087	protein_coding		CHR_CAST_EI_MMCHR11_CTG4	-1	71126032	3546
ENSMUSG00000116214	protein_coding	LT629147.3	ENSMUST00000229989	protein_coding		CHR_CAST_EI_MMCHR11_CTG4	-1	71126032	3546
ENSMUSG00000116224	processed_pseudogene	Gm48467	ENSMUST00000230138	processed_pseudogene		CHR_CAST_EI_MMCHR11_CTG5	-1	83116622	361
ENSMUSG00000116254	protein_coding	LT629147.4	ENSMUST00000229022	protein_coding		CHR_CAST_EI_MMCHR11_CTG4	-1	71192096	3528
ENSMUSG00000116254	protein_coding	LT629147.4	ENSMUST00000230594	protein_coding		CHR_CAST_EI_MMCHR11_CTG4	-1	71192096	3528
ENSMUSG00000116318	protein_coding	Atg4a	ENSMUST00000229114	protein_coding		CHR_MG104_PATCH	1	140956907	2202
ENSMUSG00000116318	protein_coding	Atg4a	ENSMUST00000230351	processed_transcript		CHR_MG104_PATCH	1	140956950	340
ENSMUSG00000116318	protein_coding	Atg4a	ENSMUST00000230416	retained_intron		CHR_MG104_PATCH	1	141044342	696
ENSMUSG00000116333	processed_pseudogene	Gm15077	ENSMUST00000229972	processed_pseudogene		CHR_MG104_PATCH	-1	141184957	362
ENSMUSG00000116342	processed_pseudogene	Gm48490	ENSMUST00000229811	processed_pseudogene		CHR_CAST_EI_MMCHR11_CTG5	-1	83128221	94
ENSMUSG00000116349	protein_coding	LT629148.11	ENSMUST00000229300	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	82988705	2730
ENSMUSG00000116349	protein_coding	LT629148.11	ENSMUST00000230992	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	-1	82988705	2730
ENSMUSG00000116391	protein_coding	Tex13b	ENSMUST00000229395	protein_coding		CHR_MG104_PATCH	-1	140813433	2116
ENSMUSG00000116391	protein_coding	Tex13b	ENSMUST00000229637	retained_intron		CHR_MG104_PATCH	-1	140810852	1292
ENSMUSG00000116399	processed_pseudogene	Gm15078	ENSMUST00000230133	processed_pseudogene		CHR_MG104_PATCH	1	141238425	782
ENSMUSG00000116411	snRNA	Gm23444	ENSMUST00000230526	snRNA		CHR_CAST_EI_MMCHR11_CTG5	1	83223794	191
ENSMUSG00000116430	protein_coding	Psmd10	ENSMUST00000230246	protein_coding		CHR_MG104_PATCH	-1	140956689	1430
ENSMUSG00000116430	protein_coding	Psmd10	ENSMUST00000229145	protein_coding		CHR_MG104_PATCH	-1	140956728	1390
ENSMUSG00000116440	miRNA	Mir7679	ENSMUST00000230420	miRNA		CHR_CAST_EI_MMCHR11_CTG5	-1	82985469	63
ENSMUSG00000116446	protein_coding	LT629148.12	ENSMUST00000230937	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83261329	597
ENSMUSG00000116446	protein_coding	LT629148.12	ENSMUST00000229190	protein_coding		CHR_CAST_EI_MMCHR11_CTG5	1	83261329	597
ENSMUSG00000116462	miRNA	Gm27598	ENSMUST00000228968	miRNA		CHR_CAST_EI_MMCHR11_CTG5	-1	83030944	63
ENSMUSG00000116488	pseudogene	LT629148.13	ENSMUST00000229838	pseudogene		CHR_CAST_EI_MMCHR11_CTG5	1	83085987	264
ENSMUSG00000116492	snoRNA	Gm23311	ENSMUST00000229600	snoRNA		CHR_CAST_EI_MMCHR11_CTG4	-1	71396189	134
ENSMUSG00000116510	protein_coding	Col4a6	ENSMUST00000231213	protein_coding		CHR_MG104_PATCH	-1	141356323	6648
ENSMUSG00000116510	protein_coding	Col4a6	ENSMUST00000230854	processed_transcript		CHR_MG104_PATCH	-1	141089849	3092
ENSMUSG00000116510	protein_coding	Col4a6	ENSMUST00000230155	retained_intron		CHR_MG104_PATCH	-1	141074876	845
ENSMUSG00000116526	protein_coding	Nlrp1b	ENSMUST00000230890	protein_coding		CHR_CAST_EI_MMCHR11_CTG4	-1	71242913	3588
ENSMUSG00000116526	protein_coding	Nlrp1b	ENSMUST00000229202	protein_coding		CHR_CAST_EI_MMCHR11_CTG4	-1	71242913	3516
ENSMUSG00000116526	protein_coding	Nlrp1b	ENSMUST00000229032	protein_coding		CHR_CAST_EI_MMCHR11_CTG4	-1	71242913	3588
ENSMUSG00000116526	protein_coding	Nlrp1b	ENSMUST00000229006	protein_coding		CHR_CAST_EI_MMCHR11_CTG4	-1	71242913	3516
ENSMUSG00000117716	lncRNA	Gm30082	ENSMUST00000237509	lncRNA		CHR_MG153_PATCH	1	4201778	835
ENSMUSG00000117776	lncRNA	Gm50230	ENSMUST00000235472	retained_intron		CHR_MG153_PATCH	-1	4191046	3709
ENSMUSG00000117997	lncRNA	1500032F14Rik	ENSMUST00000238146	lncRNA		CHR_MG153_PATCH	-1	4257650	460
ENSMUSG00000118019	lncRNA	Gm50251	ENSMUST00000236715	lncRNA		CHR_MG153_PATCH	-1	4192781	241
ENSMUSG00000118323	protein_coding	Gm45928	ENSMUST00000238166	nonsense_mediated_decay		CHR_MG153_PATCH	1	4214356	473
ENSMUSG00000118323	protein_coding	Gm45928	ENSMUST00000236315	protein_coding		CHR_MG153_PATCH	1	4214429	357
ENSMUSG00000102455	protein_coding	Tmem150a	ENSMUST00000193693	protein_coding		CHR_MG184_PATCH	1	72355446	1546
ENSMUSG00000102455	protein_coding	Tmem150a	ENSMUST00000194404	protein_coding		CHR_MG184_PATCH	1	72355446	1478
ENSMUSG00000102455	protein_coding	Tmem150a	ENSMUST00000206567	protein_coding		CHR_MG184_PATCH	1	72355473	540
ENSMUSG00000102455	protein_coding	Tmem150a	ENSMUST00000206945	processed_transcript		CHR_MG184_PATCH	1	72356128	551
ENSMUSG00000102455	protein_coding	Tmem150a	ENSMUST00000206209	protein_coding		CHR_MG184_PATCH	1	72356225	544
ENSMUSG00000102671	protein_coding	Vamp5	ENSMUST00000206266	protein_coding		CHR_MG184_PATCH	-1	72372134	2619
ENSMUSG00000102671	protein_coding	Vamp5	ENSMUST00000192869	protein_coding		CHR_MG184_PATCH	-1	72380421	623
ENSMUSG00000102671	protein_coding	Vamp5	ENSMUST00000195019	protein_coding		CHR_MG184_PATCH	-1	72380467	553
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000205969	retained_intron		CHR_MG184_PATCH	-1	72362122	2410
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000194851	protein_coding		CHR_MG184_PATCH	-1	72362392	1191
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000193509	protein_coding		CHR_MG184_PATCH	-1	72362431	1434
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000191989	nonsense_mediated_decay		CHR_MG184_PATCH	-1	72362359	1100
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000192123	protein_coding		CHR_MG184_PATCH	-1	72361395	829
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000194461	protein_coding		CHR_MG184_PATCH	-1	72366955	969
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000195191	nonsense_mediated_decay		CHR_MG184_PATCH	-1	72362343	739
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000192233	nonsense_mediated_decay		CHR_MG184_PATCH	-1	72362389	789
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000193589	nonsense_mediated_decay		CHR_MG184_PATCH	-1	72362362	638
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000194976	protein_coding		CHR_MG184_PATCH	-1	72362381	869
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000195592	nonsense_mediated_decay		CHR_MG184_PATCH	-1	72362364	617
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000193933	retained_intron		CHR_MG184_PATCH	-1	72361066	418
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000193818	retained_intron		CHR_MG184_PATCH	-1	72362427	728
ENSMUSG00000102720	protein_coding	Rnf181	ENSMUST00000206711	retained_intron		CHR_MG184_PATCH	-1	72361994	798
ENSMUSG00000103019	protein_coding	Ggcx	ENSMUST00000194207	protein_coding		CHR_MG184_PATCH	1	72414307	2929
ENSMUSG00000103019	protein_coding	Ggcx	ENSMUST00000205972	nonsense_mediated_decay		CHR_MG184_PATCH	1	72414340	1099
ENSMUSG00000103019	protein_coding	Ggcx	ENSMUST00000206601	nonsense_mediated_decay		CHR_MG184_PATCH	1	72417854	2014
ENSMUSG00000103019	protein_coding	Ggcx	ENSMUST00000193821	nonsense_mediated_decay		CHR_MG184_PATCH	1	72417905	775
ENSMUSG00000103019	protein_coding	Ggcx	ENSMUST00000206507	nonsense_mediated_decay		CHR_MG184_PATCH	1	72426616	569
ENSMUSG00000103205	protein_coding	Vamp8	ENSMUST00000192980	protein_coding		CHR_MG184_PATCH	-1	72390702	820
ENSMUSG00000103205	protein_coding	Vamp8	ENSMUST00000195876	protein_coding		CHR_MG184_PATCH	-1	72389910	2076
ENSMUSG00000103879	protein_coding	Sftpb	ENSMUST00000192630	protein_coding		CHR_MG184_PATCH	1	72304610	1564
ENSMUSG00000103879	protein_coding	Sftpb	ENSMUST00000231123	protein_coding		CHR_MG184_PATCH	1	72304610	1564
ENSMUSG00000103879	protein_coding	Sftpb	ENSMUST00000215695	protein_coding		CHR_MG184_PATCH	1	72304625	720
ENSMUSG00000103879	protein_coding	Sftpb	ENSMUST00000230547	protein_coding		CHR_MG184_PATCH	1	72304625	720
ENSMUSG00000104250	protein_coding	Usp39	ENSMUST00000193449	protein_coding		CHR_MG184_PATCH	-1	72345183	2244
ENSMUSG00000104250	protein_coding	Usp39	ENSMUST00000191739	retained_intron		CHR_MG184_PATCH	-1	72333367	751
ENSMUSG00000104250	protein_coding	Usp39	ENSMUST00000205987	nonsense_mediated_decay		CHR_MG184_PATCH	-1	72342967	701
ENSMUSG00000104463	protein_coding	Mat2a	ENSMUST00000206765	protein_coding		CHR_MG184_PATCH	-1	72439555	3387
ENSMUSG00000104463	protein_coding	Mat2a	ENSMUST00000193334	protein_coding		CHR_MG184_PATCH	-1	72439557	2804
ENSMUSG00000104463	protein_coding	Mat2a	ENSMUST00000205622	protein_coding		CHR_MG184_PATCH	-1	72434990	590
ENSMUSG00000104463	protein_coding	Mat2a	ENSMUST00000205441	nonsense_mediated_decay		CHR_MG184_PATCH	-1	72435075	673
ENSMUSG00000104463	protein_coding	Mat2a	ENSMUST00000206021	protein_coding		CHR_MG184_PATCH	-1	72439555	1400
ENSMUSG00000104463	protein_coding	Mat2a	ENSMUST00000206283	protein_coding		CHR_MG184_PATCH	-1	72439387	576
ENSMUSG00000104463	protein_coding	Mat2a	ENSMUST00000206173	retained_intron		CHR_MG184_PATCH	-1	72439539	762
ENSMUSG00000104463	protein_coding	Mat2a	ENSMUST00000205541	retained_intron		CHR_MG184_PATCH	-1	72439542	646
ENSMUSG00000104463	protein_coding	Mat2a	ENSMUST00000206767	processed_transcript		CHR_MG184_PATCH	-1	72439547	305
ENSMUSG00000104463	protein_coding	Mat2a	ENSMUST00000205710	retained_intron		CHR_MG184_PATCH	-1	72439555	755
ENSMUSG00000106789	processed_pseudogene	Gm14651	ENSMUST00000201425	processed_pseudogene		CHR_MG3231_PATCH	-1	60613497	442
ENSMUSG00000106809	processed_pseudogene	Gm715	ENSMUST00000201300	processed_pseudogene		CHR_MG3231_PATCH	1	60546265	831
ENSMUSG00000107001	lncRNA	Gm14661	ENSMUST00000201496	lncRNA		CHR_MG3231_PATCH	1	60555974	2051
ENSMUSG00000107080	processed_pseudogene	Gm8163	ENSMUST00000202164	processed_pseudogene		CHR_MG3231_PATCH	-1	60725694	1060
ENSMUSG00000107119	processed_pseudogene	Hspa9-ps1	ENSMUST00000202077	processed_pseudogene		CHR_MG3231_PATCH	-1	60577124	1933
ENSMUSG00000107236	processed_pseudogene	Gm4909	ENSMUST00000202558	processed_pseudogene		CHR_MG3231_PATCH	-1	60705309	794
ENSMUSG00000107328	miRNA	Mir505	ENSMUST00000200688	miRNA		CHR_MG3231_PATCH	-1	60394378	90
ENSMUSG00000107361	protein_coding	Gm7073	ENSMUST00000202819	protein_coding		CHR_MG3231_PATCH	-1	60457077	1419
ENSMUSG00000107361	protein_coding	Gm7073	ENSMUST00000200725	protein_coding		CHR_MG3231_PATCH	-1	60453359	1374
ENSMUSG00000107361	protein_coding	Gm7073	ENSMUST00000202944	protein_coding		CHR_MG3231_PATCH	-1	60537495	1369
ENSMUSG00000108408	protein_coding	Atp11c	ENSMUST00000206326	protein_coding		CHR_MG3231_PATCH	-1	60590944	6039
ENSMUSG00000108408	protein_coding	Atp11c	ENSMUST00000206309	protein_coding		CHR_MG3231_PATCH	-1	60403812	5939
ENSMUSG00000108408	protein_coding	Atp11c	ENSMUST00000206006	protein_coding		CHR_MG3231_PATCH	-1	60403812	6044
ENSMUSG00000108408	protein_coding	Atp11c	ENSMUST00000206994	processed_transcript		CHR_MG3231_PATCH	-1	60266830	1154
ENSMUSG00000108408	protein_coding	Atp11c	ENSMUST00000206471	processed_transcript		CHR_MG3231_PATCH	-1	60590944	4475
ENSMUSG00000108664	lncRNA	Gm45051	ENSMUST00000205337	lncRNA		CHR_MG184_PATCH	-1	72348457	963
ENSMUSG00000108680	protein_coding	0610030E20Rik	ENSMUST00000205401	retained_intron		CHR_MG184_PATCH	1	72347316	3900
ENSMUSG00000108680	protein_coding	0610030E20Rik	ENSMUST00000206175	retained_intron		CHR_MG184_PATCH	1	72347325	1033
ENSMUSG00000108680	protein_coding	0610030E20Rik	ENSMUST00000192144	protein_coding		CHR_MG184_PATCH	1	72347333	4605
ENSMUSG00000108680	protein_coding	0610030E20Rik	ENSMUST00000204386	retained_intron		CHR_MG184_PATCH	1	72347366	2118
ENSMUSG00000108706	TEC	Particl	ENSMUST00000206956	TEC		CHR_MG184_PATCH	1	72439050	1560
ENSMUSG00000110733	TEC	Gm42591	ENSMUST00000213871	TEC		CHR_MG171_PATCH	-1	131625542	700
ENSMUSG00000110743	TEC	Gm43186	ENSMUST00000216849	TEC		CHR_MG171_PATCH	-1	132535249	824
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000216596	protein_coding		CHR_MG190_MG3751_PATCH	-1	70783483	3047
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000217118	protein_coding		CHR_MG190_MG3751_PATCH	-1	70796983	5305
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000216285	protein_coding		CHR_MG190_MG3751_PATCH	-1	70792432	4251
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000214724	retained_intron		CHR_MG190_MG3751_PATCH	-1	70781383	894
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000215621	retained_intron		CHR_MG190_MG3751_PATCH	-1	70792396	634
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000215236	protein_coding		CHR_MG190_MG3751_PATCH	-1	70805049	530
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000216703	protein_coding		CHR_MG190_MG3751_PATCH	-1	70804977	449
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000213838	protein_coding		CHR_MG190_MG3751_PATCH	-1	70792396	492
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000217155	protein_coding		CHR_MG190_MG3751_PATCH	-1	70790773	391
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000213384	protein_coding		CHR_MG190_MG3751_PATCH	-1	70792417	438
ENSMUSG00000110763	protein_coding	Mast3	ENSMUST00000213933	protein_coding		CHR_MG190_MG3751_PATCH	-1	70804980	322
ENSMUSG00000110775	lncRNA	4930563F08Rik	ENSMUST00000217548	lncRNA		CHR_MG171_PATCH	1	131880270	515
ENSMUSG00000110777	protein_coding	Ifi30	ENSMUST00000213938	protein_coding		CHR_MG190_MG3751_PATCH	-1	70766626	744
ENSMUSG00000110777	protein_coding	Ifi30	ENSMUST00000229632	protein_coding		CHR_MG190_MG3751_PATCH	-1	70766626	744
ENSMUSG00000110798	protein_coding	Pwwp2b	ENSMUST00000214302	protein_coding		CHR_MG3251_PATCH	1	139226669	3057
ENSMUSG00000110798	protein_coding	Pwwp2b	ENSMUST00000213370	protein_coding		CHR_MG3251_PATCH	1	139226674	2543
ENSMUSG00000110798	protein_coding	Pwwp2b	ENSMUST00000217428	retained_intron		CHR_MG3251_PATCH	1	139243986	4105
ENSMUSG00000110805	TEC	6330537M06Rik	ENSMUST00000215076	TEC		CHR_MG190_MG3751_PATCH	1	70766574	1642
ENSMUSG00000110860	protein_coding	Ptpmt1	ENSMUST00000215279	protein_coding		CHR_MG191_PATCH	-1	90917987	783
ENSMUSG00000110860	protein_coding	Ptpmt1	ENSMUST00000229376	protein_coding		CHR_MG191_PATCH	-1	90917987	783
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000215639	processed_transcript		CHR_MG191_PATCH	1	90940383	350
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000214419	protein_coding		CHR_MG191_PATCH	1	90940398	7851
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000213209	protein_coding		CHR_MG191_PATCH	1	90940398	4830
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000215738	protein_coding		CHR_MG191_PATCH	1	90940398	4678
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000214684	protein_coding		CHR_MG191_PATCH	1	90940398	7806
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000214562	processed_transcript		CHR_MG191_PATCH	1	90940459	426
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000213506	processed_transcript		CHR_MG191_PATCH	1	90940538	478
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000214114	protein_coding		CHR_MG191_PATCH	1	90940544	7614
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000215401	processed_transcript		CHR_MG191_PATCH	1	90965093	271
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000215997	protein_coding		CHR_MG191_PATCH	1	90987621	7800
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000213174	protein_coding		CHR_MG191_PATCH	1	90987747	7579
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000217268	protein_coding		CHR_MG191_PATCH	1	90998580	4441
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000216171	protein_coding		CHR_MG191_PATCH	1	90998580	4432
ENSMUSG00000110883	protein_coding	Celf1	ENSMUST00000213635	processed_transcript		CHR_MG191_PATCH	1	91012490	489
ENSMUSG00000110900	protein_coding	Lsm4	ENSMUST00000215536	protein_coding		CHR_MG190_MG3751_PATCH	1	70673248	925
ENSMUSG00000110900	protein_coding	Lsm4	ENSMUST00000215386	protein_coding		CHR_MG190_MG3751_PATCH	1	70673379	365
ENSMUSG00000110900	protein_coding	Lsm4	ENSMUST00000216239	protein_coding		CHR_MG190_MG3751_PATCH	1	70673385	575
ENSMUSG00000110900	protein_coding	Lsm4	ENSMUST00000216410	protein_coding		CHR_MG190_MG3751_PATCH	1	70673432	636
ENSMUSG00000110900	protein_coding	Lsm4	ENSMUST00000213915	retained_intron		CHR_MG190_MG3751_PATCH	1	70677665	375
ENSMUSG00000110904	TEC	Gm42993	ENSMUST00000216274	TEC		CHR_MG171_PATCH	-1	132022935	7325
ENSMUSG00000110906	protein_coding	Arrdc2	ENSMUST00000217126	retained_intron		CHR_MG190_MG3751_PATCH	-1	70836582	1459
ENSMUSG00000110906	protein_coding	Arrdc2	ENSMUST00000215203	protein_coding		CHR_MG190_MG3751_PATCH	-1	70839715	2355
ENSMUSG00000110906	protein_coding	Arrdc2	ENSMUST00000216106	retained_intron		CHR_MG190_MG3751_PATCH	-1	70837690	1860
ENSMUSG00000110906	protein_coding	Arrdc2	ENSMUST00000213421	retained_intron		CHR_MG190_MG3751_PATCH	-1	70837735	855
ENSMUSG00000110906	protein_coding	Arrdc2	ENSMUST00000216528	protein_coding		CHR_MG190_MG3751_PATCH	-1	70839655	372
ENSMUSG00000110906	protein_coding	Arrdc2	ENSMUST00000215622	retained_intron		CHR_MG190_MG3751_PATCH	-1	70839513	803
ENSMUSG00000110906	protein_coding	Arrdc2	ENSMUST00000214365	processed_transcript		CHR_MG190_MG3751_PATCH	-1	70839655	372
ENSMUSG00000110907	TEC	Gm42991	ENSMUST00000213799	TEC		CHR_MG171_PATCH	-1	131975887	3837
ENSMUSG00000110934	TEC	Gm43187	ENSMUST00000214612	TEC		CHR_MG171_PATCH	-1	132492740	2397
ENSMUSG00000110961	protein_coding	C1qtnf4	ENSMUST00000214937	protein_coding		CHR_MG191_PATCH	1	90885860	1290
ENSMUSG00000110965	TEC	Gm42995	ENSMUST00000214939	TEC		CHR_MG171_PATCH	-1	132203169	1330
ENSMUSG00000110974	protein_coding	Jund	ENSMUST00000216625	protein_coding		CHR_MG190_MG3751_PATCH	1	70698949	1668
ENSMUSG00000110975	TEC	Gm43483	ENSMUST00000213175	TEC		CHR_MG171_PATCH	-1	131642808	2860
ENSMUSG00000110979	TEC	Gm42442	ENSMUST00000216173	TEC		CHR_MG171_PATCH	-1	131698354	1133
ENSMUSG00000111011	protein_coding	Lrrc27	ENSMUST00000213529	protein_coding		CHR_MG3251_PATCH	1	139191175	2113
ENSMUSG00000111011	protein_coding	Lrrc27	ENSMUST00000217190	protein_coding		CHR_MG3251_PATCH	1	139191198	513
ENSMUSG00000111011	protein_coding	Lrrc27	ENSMUST00000213321	protein_coding		CHR_MG3251_PATCH	1	139191459	1692
ENSMUSG00000111011	protein_coding	Lrrc27	ENSMUST00000216497	protein_coding		CHR_MG3251_PATCH	1	139192862	585
ENSMUSG00000111011	protein_coding	Lrrc27	ENSMUST00000215771	processed_transcript		CHR_MG3251_PATCH	1	139198798	351
ENSMUSG00000111011	protein_coding	Lrrc27	ENSMUST00000214423	retained_intron		CHR_MG3251_PATCH	1	139199085	912
ENSMUSG00000111011	protein_coding	Lrrc27	ENSMUST00000214946	processed_transcript		CHR_MG3251_PATCH	1	139212130	744
ENSMUSG00000111011	protein_coding	Lrrc27	ENSMUST00000215597	processed_transcript		CHR_MG3251_PATCH	1	139214080	619
ENSMUSG00000111011	protein_coding	Lrrc27	ENSMUST00000216535	processed_transcript		CHR_MG3251_PATCH	1	139216800	527
ENSMUSG00000111026	pseudogene	Gm17661	ENSMUST00000215181	pseudogene		CHR_MG191_PATCH	1	90917643	270
ENSMUSG00000111130	TEC	Gm42441	ENSMUST00000215391	TEC		CHR_MG171_PATCH	-1	131906443	748
ENSMUSG00000111134	lncRNA	Gm11175	ENSMUST00000214367	lncRNA		CHR_MG190_MG3751_PATCH	-1	70699689	408
ENSMUSG00000111134	lncRNA	Gm11175	ENSMUST00000215354	lncRNA		CHR_MG190_MG3751_PATCH	-1	70700080	543
ENSMUSG00000111170	TEC	Gm43018	ENSMUST00000215644	TEC		CHR_MG171_PATCH	-1	132440530	1275
ENSMUSG00000111185	TEC	Gm42438	ENSMUST00000213128	TEC		CHR_MG171_PATCH	-1	131958566	974
ENSMUSG00000111206	protein_coding	Gm3336	ENSMUST00000216900	protein_coding		CHR_MG190_MG3751_PATCH	1	70718543	1149
ENSMUSG00000111206	protein_coding	Gm3336	ENSMUST00000216154	protein_coding		CHR_MG190_MG3751_PATCH	1	70718543	842
ENSMUSG00000111230	TEC	C230071H17Rik	ENSMUST00000216832	TEC		CHR_MG171_PATCH	-1	131885939	2973
ENSMUSG00000111255	TEC	Gm42443	ENSMUST00000215108	TEC		CHR_MG171_PATCH	-1	131695876	1155
ENSMUSG00000111277	protein_coding	Rab3a	ENSMUST00000217185	protein_coding		CHR_MG190_MG3751_PATCH	1	70755854	660
ENSMUSG00000111277	protein_coding	Rab3a	ENSMUST00000229860	protein_coding		CHR_MG190_MG3751_PATCH	1	70755854	660
ENSMUSG00000111311	TEC	Gm42996	ENSMUST00000214718	TEC		CHR_MG171_PATCH	-1	132206705	1636
ENSMUSG00000111347	TEC	Gm43019	ENSMUST00000216302	TEC		CHR_MG171_PATCH	-1	132437434	2863
ENSMUSG00000111367	lncRNA	2010320M18Rik	ENSMUST00000215240	lncRNA		CHR_MG190_MG3751_PATCH	1	70776810	1009
ENSMUSG00000111391	lncRNA	2810432F15Rik	ENSMUST00000215931	lncRNA		CHR_MG171_PATCH	1	131615439	657
ENSMUSG00000111393	protein_coding	Dpysl4	ENSMUST00000216216	protein_coding		CHR_MG3251_PATCH	1	139064188	3552
ENSMUSG00000111393	protein_coding	Dpysl4	ENSMUST00000215221	processed_transcript		CHR_MG3251_PATCH	1	139064189	540
ENSMUSG00000111393	protein_coding	Dpysl4	ENSMUST00000214233	retained_intron		CHR_MG3251_PATCH	1	139064214	4196
ENSMUSG00000111393	protein_coding	Dpysl4	ENSMUST00000215364	retained_intron		CHR_MG3251_PATCH	1	139064215	3156
ENSMUSG00000111393	protein_coding	Dpysl4	ENSMUST00000213588	protein_coding		CHR_MG3251_PATCH	1	139066552	654
ENSMUSG00000111393	protein_coding	Dpysl4	ENSMUST00000213523	protein_coding		CHR_MG3251_PATCH	1	139067434	2727
ENSMUSG00000111401	lncRNA	Gm42626	ENSMUST00000215310	lncRNA		CHR_MG171_PATCH	1	132546057	1148
ENSMUSG00000111475	protein_coding	Muc2	ENSMUST00000215580	protein_coding		CHR_MG3172_PATCH	1	141690340	2690
ENSMUSG00000111475	protein_coding	Muc2	ENSMUST00000217272	protein_coding		CHR_MG3172_PATCH	1	141695703	399
ENSMUSG00000111475	protein_coding	Muc2	ENSMUST00000213876	protein_coding		CHR_MG3172_PATCH	1	141699501	823
ENSMUSG00000111475	protein_coding	Muc2	ENSMUST00000217366	protein_coding		CHR_MG3172_PATCH	1	141699501	711
ENSMUSG00000111475	protein_coding	Muc2	ENSMUST00000214028	protein_coding		CHR_MG3172_PATCH	1	141702392	241
ENSMUSG00000111475	protein_coding	Muc2	ENSMUST00000214632	protein_coding		CHR_MG3172_PATCH	1	141704460	447
ENSMUSG00000111475	protein_coding	Muc2	ENSMUST00000213305	protein_coding		CHR_MG3172_PATCH	1	141712531	2926
ENSMUSG00000111475	protein_coding	Muc2	ENSMUST00000215865	protein_coding		CHR_MG3172_PATCH	1	141714751	2032
ENSMUSG00000111476	protein_coding	Mpv17l2	ENSMUST00000216536	protein_coding		CHR_MG190_MG3751_PATCH	-1	70760943	980
ENSMUSG00000111476	protein_coding	Mpv17l2	ENSMUST00000216636	retained_intron		CHR_MG190_MG3751_PATCH	-1	70760834	692
ENSMUSG00000111476	protein_coding	Mpv17l2	ENSMUST00000214350	nonsense_mediated_decay		CHR_MG190_MG3751_PATCH	-1	70760459	308
ENSMUSG00000111476	protein_coding	Mpv17l2	ENSMUST00000216264	processed_transcript		CHR_MG190_MG3751_PATCH	-1	70760897	339
ENSMUSG00000111502	pseudogene	CU682339.1	ENSMUST00000216153	pseudogene		CHR_MG3231_PATCH	-1	60426357	435
ENSMUSG00000111513	TEC	Gm42588	ENSMUST00000217154	TEC		CHR_MG171_PATCH	-1	131609594	1297
ENSMUSG00000111519	TEC	Gm45328	ENSMUST00000215534	TEC		CHR_MG3251_PATCH	-1	139191378	917
ENSMUSG00000111536	protein_coding	Stk32c	ENSMUST00000215797	protein_coding		CHR_MG3251_PATCH	-1	139166704	2206
ENSMUSG00000111536	protein_coding	Stk32c	ENSMUST00000214031	protein_coding		CHR_MG3251_PATCH	-1	139191494	1883
ENSMUSG00000111538	TEC	Gm42440	ENSMUST00000214126	TEC		CHR_MG171_PATCH	-1	131934680	2284
ENSMUSG00000111579	protein_coding	Rapsn	ENSMUST00000216935	protein_coding		CHR_MG191_PATCH	1	91035621	1450
ENSMUSG00000111579	protein_coding	Rapsn	ENSMUST00000216110	protein_coding		CHR_MG191_PATCH	1	91035628	1458
ENSMUSG00000111579	protein_coding	Rapsn	ENSMUST00000215408	protein_coding		CHR_MG191_PATCH	1	91035642	1606
ENSMUSG00000111579	protein_coding	Rapsn	ENSMUST00000214574	retained_intron		CHR_MG191_PATCH	1	91042786	686
ENSMUSG00000111592	processed_pseudogene	Gm13777	ENSMUST00000215654	processed_pseudogene		CHR_MG191_PATCH	-1	91031123	345
ENSMUSG00000111607	protein_coding	Iqcn	ENSMUST00000216521	protein_coding		CHR_MG190_MG3751_PATCH	1	70703457	4584
ENSMUSG00000111614	protein_coding	Jakmip3	ENSMUST00000217503	protein_coding		CHR_MG3251_PATCH	1	138940730	2180
ENSMUSG00000111614	protein_coding	Jakmip3	ENSMUST00000213872	protein_coding		CHR_MG3251_PATCH	1	138940730	1571
ENSMUSG00000111614	protein_coding	Jakmip3	ENSMUST00000216498	retained_intron		CHR_MG3251_PATCH	1	138989320	1461
ENSMUSG00000111614	protein_coding	Jakmip3	ENSMUST00000238378	retained_intron		CHR_MG3251_PATCH	1	138989323	1452
ENSMUSG00000111614	protein_coding	Jakmip3	ENSMUST00000213309	protein_coding		CHR_MG3251_PATCH	1	139040798	3391
ENSMUSG00000111614	protein_coding	Jakmip3	ENSMUST00000238387	processed_transcript		CHR_MG3251_PATCH	1	139055619	358
ENSMUSG00000111642	lncRNA	Gm28616	ENSMUST00000214335	lncRNA		CHR_MG171_PATCH	1	132544436	441
ENSMUSG00000111659	TEC	Gm43188	ENSMUST00000217277	TEC		CHR_MG171_PATCH	-1	132499838	2160
ENSMUSG00000111677	lncRNA	Gm45613	ENSMUST00000217209	lncRNA		CHR_MG3251_PATCH	-1	139020999	443
ENSMUSG00000111688	protein_coding	Kbtbd4	ENSMUST00000215110	protein_coding		CHR_MG191_PATCH	1	90904740	2343
ENSMUSG00000111688	protein_coding	Kbtbd4	ENSMUST00000216395	protein_coding		CHR_MG191_PATCH	1	90904743	2437
ENSMUSG00000111688	protein_coding	Kbtbd4	ENSMUST00000217632	processed_transcript		CHR_MG191_PATCH	1	90904769	340
ENSMUSG00000111688	protein_coding	Kbtbd4	ENSMUST00000216923	processed_transcript		CHR_MG191_PATCH	1	90905075	469
ENSMUSG00000111688	protein_coding	Kbtbd4	ENSMUST00000216829	processed_transcript		CHR_MG191_PATCH	1	90909164	632
ENSMUSG00000111706	protein_coding	Kcnn1	ENSMUST00000215516	protein_coding		CHR_MG190_MG3751_PATCH	-1	70857008	4047
ENSMUSG00000111706	protein_coding	Kcnn1	ENSMUST00000215764	protein_coding		CHR_MG190_MG3751_PATCH	-1	70857003	4045
ENSMUSG00000111706	protein_coding	Kcnn1	ENSMUST00000217003	protein_coding		CHR_MG190_MG3751_PATCH	-1	70855580	2964
ENSMUSG00000111706	protein_coding	Kcnn1	ENSMUST00000215672	protein_coding		CHR_MG190_MG3751_PATCH	-1	70863253	2528
ENSMUSG00000111706	protein_coding	Kcnn1	ENSMUST00000214903	nonsense_mediated_decay		CHR_MG190_MG3751_PATCH	-1	70852743	839
ENSMUSG00000111706	protein_coding	Kcnn1	ENSMUST00000216745	protein_coding		CHR_MG190_MG3751_PATCH	-1	70855391	1608
ENSMUSG00000111706	protein_coding	Kcnn1	ENSMUST00000215838	protein_coding		CHR_MG190_MG3751_PATCH	-1	70850734	338
ENSMUSG00000111706	protein_coding	Kcnn1	ENSMUST00000217594	protein_coding		CHR_MG190_MG3751_PATCH	-1	70863002	613
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000214148	protein_coding		CHR_MG191_PATCH	1	90847155	2596
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000213376	nonsense_mediated_decay		CHR_MG191_PATCH	1	90847178	1066
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000217470	processed_transcript		CHR_MG191_PATCH	1	90847190	998
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000214378	protein_coding		CHR_MG191_PATCH	1	90847231	2377
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000215609	retained_intron		CHR_MG191_PATCH	1	90847253	2241
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000216454	protein_coding		CHR_MG191_PATCH	1	90847273	2281
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000216814	processed_transcript		CHR_MG191_PATCH	1	90847287	1047
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000215750	retained_intron		CHR_MG191_PATCH	1	90852191	3103
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000214987	retained_intron		CHR_MG191_PATCH	1	90852826	457
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000216471	retained_intron		CHR_MG191_PATCH	1	90861240	574
ENSMUSG00000111714	protein_coding	Mtch2	ENSMUST00000217168	retained_intron		CHR_MG191_PATCH	1	90863459	412
ENSMUSG00000111718	miRNA	Mir7240	ENSMUST00000216046	miRNA		CHR_MG190_MG3751_PATCH	1	70798130	58
ENSMUSG00000111727	protein_coding	Ndufs3	ENSMUST00000215698	processed_transcript		CHR_MG191_PATCH	-1	90898454	409
ENSMUSG00000111727	protein_coding	Ndufs3	ENSMUST00000215399	protein_coding		CHR_MG191_PATCH	-1	90904827	1046
ENSMUSG00000111727	protein_coding	Ndufs3	ENSMUST00000214398	processed_transcript		CHR_MG191_PATCH	-1	90902686	690
ENSMUSG00000111727	protein_coding	Ndufs3	ENSMUST00000217471	processed_transcript		CHR_MG191_PATCH	-1	90898938	550
ENSMUSG00000111727	protein_coding	Ndufs3	ENSMUST00000215953	processed_transcript		CHR_MG191_PATCH	-1	90904642	707
ENSMUSG00000111727	protein_coding	Ndufs3	ENSMUST00000214450	processed_transcript		CHR_MG191_PATCH	-1	90904702	783
ENSMUSG00000111735	TEC	Gm42989	ENSMUST00000214226	TEC		CHR_MG171_PATCH	-1	132372682	2306
ENSMUSG00000111773	protein_coding	Pde4c	ENSMUST00000214330	protein_coding		CHR_MG190_MG3751_PATCH	1	70723720	774
ENSMUSG00000111773	protein_coding	Pde4c	ENSMUST00000213630	protein_coding		CHR_MG190_MG3751_PATCH	1	70724064	3203
ENSMUSG00000111773	protein_coding	Pde4c	ENSMUST00000217521	protein_coding		CHR_MG190_MG3751_PATCH	1	70724065	3290
ENSMUSG00000111773	protein_coding	Pde4c	ENSMUST00000216015	processed_transcript		CHR_MG190_MG3751_PATCH	1	70730112	392
ENSMUSG00000111773	protein_coding	Pde4c	ENSMUST00000225530	protein_coding		CHR_MG190_MG3751_PATCH	1	70743032	3099
ENSMUSG00000111773	protein_coding	Pde4c	ENSMUST00000215993	retained_intron		CHR_MG190_MG3751_PATCH	1	70743079	3452
ENSMUSG00000111773	protein_coding	Pde4c	ENSMUST00000213931	retained_intron		CHR_MG190_MG3751_PATCH	1	70747891	2489
ENSMUSG00000111784	snRNA	Gm27975	ENSMUST00000213892	snRNA		CHR_MG3251_PATCH	-1	139177483	101
ENSMUSG00000111790	lncRNA	Gm32486	ENSMUST00000217234	lncRNA		CHR_MG3251_PATCH	-1	139275052	3816
ENSMUSG00000111791	lncRNA	Gm13778	ENSMUST00000213110	lncRNA		CHR_MG191_PATCH	-1	91053919	537
ENSMUSG00000111791	lncRNA	Gm13778	ENSMUST00000213303	lncRNA		CHR_MG191_PATCH	-1	91053934	367
ENSMUSG00000111804	TEC	2610011E03Rik	ENSMUST00000216485	TEC		CHR_MG171_PATCH	-1	131998414	2235
ENSMUSG00000111813	lncRNA	Gm42439	ENSMUST00000214471	lncRNA		CHR_MG171_PATCH	1	131954993	486
ENSMUSG00000111826	protein_coding	Pik3r2	ENSMUST00000214106	protein_coding		CHR_MG190_MG3751_PATCH	-1	70776708	3165
ENSMUSG00000111826	protein_coding	Pik3r2	ENSMUST00000217525	protein_coding		CHR_MG190_MG3751_PATCH	-1	70769383	813
ENSMUSG00000111826	protein_coding	Pik3r2	ENSMUST00000216044	retained_intron		CHR_MG190_MG3751_PATCH	-1	70769659	746
ENSMUSG00000111826	protein_coding	Pik3r2	ENSMUST00000217246	retained_intron		CHR_MG190_MG3751_PATCH	-1	70773159	783
ENSMUSG00000111826	protein_coding	Pik3r2	ENSMUST00000214572	protein_coding		CHR_MG190_MG3751_PATCH	-1	70774682	250
ENSMUSG00000111826	protein_coding	Pik3r2	ENSMUST00000214122	processed_transcript		CHR_MG190_MG3751_PATCH	-1	70776674	626
ENSMUSG00000111872	protein_coding	Il12rb1	ENSMUST00000215923	retained_intron		CHR_MG190_MG3751_PATCH	1	70808444	1704
ENSMUSG00000111872	protein_coding	Il12rb1	ENSMUST00000217569	protein_coding		CHR_MG190_MG3751_PATCH	1	70808444	2873
ENSMUSG00000111872	protein_coding	Il12rb1	ENSMUST00000214100	protein_coding		CHR_MG190_MG3751_PATCH	1	70808479	2741
ENSMUSG00000111872	protein_coding	Il12rb1	ENSMUST00000216577	protein_coding		CHR_MG190_MG3751_PATCH	1	70808482	729
ENSMUSG00000111872	protein_coding	Il12rb1	ENSMUST00000215422	retained_intron		CHR_MG190_MG3751_PATCH	1	70812335	389
ENSMUSG00000111872	protein_coding	Il12rb1	ENSMUST00000215033	retained_intron		CHR_MG190_MG3751_PATCH	1	70813211	427
ENSMUSG00000111879	TEC	Gm42992	ENSMUST00000215315	TEC		CHR_MG171_PATCH	-1	131993385	6836
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000231071	protein_coding		CHR_MG3490_PATCH	1	112720455	394
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000230508	protein_coding		CHR_MG3490_PATCH	1	112722174	6641
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000230181	protein_coding		CHR_MG3490_PATCH	1	112722194	6566
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000230432	protein_coding		CHR_MG3490_PATCH	1	112722194	6565
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000230470	protein_coding		CHR_MG3490_PATCH	1	112722194	3817
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000231181	protein_coding		CHR_MG3490_PATCH	1	112724619	5395
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000230693	retained_intron		CHR_MG3490_PATCH	1	112731214	343
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000229794	retained_intron		CHR_MG3490_PATCH	1	112737238	746
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000229992	retained_intron		CHR_MG3490_PATCH	1	112740386	746
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000231006	retained_intron		CHR_MG3490_PATCH	1	112743281	478
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000231154	retained_intron		CHR_MG3490_PATCH	1	112743588	457
ENSMUSG00000115972	protein_coding	Cep170b	ENSMUST00000230792	retained_intron		CHR_MG3490_PATCH	1	112743964	417
ENSMUSG00000116001	protein_coding	1700001C19Rik	ENSMUST00000230564	protein_coding		CHR_MG209_PATCH	-1	47437374	1622
ENSMUSG00000116001	protein_coding	1700001C19Rik	ENSMUST00000231186	protein_coding		CHR_MG209_PATCH	-1	47421879	614
ENSMUSG00000116001	protein_coding	1700001C19Rik	ENSMUST00000230235	processed_transcript		CHR_MG209_PATCH	-1	47414710	691
ENSMUSG00000116001	protein_coding	1700001C19Rik	ENSMUST00000230359	processed_transcript		CHR_MG209_PATCH	-1	47437375	654
ENSMUSG00000116042	rRNA	Gm26216	ENSMUST00000230046	rRNA		CHR_MG209_PATCH	1	47290956	73
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000230928	protein_coding		CHR_MG209_PATCH	1	47368886	1017
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000230755	protein_coding		CHR_MG209_PATCH	1	47368890	1018
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000230295	retained_intron		CHR_MG209_PATCH	1	47368891	4090
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000229975	protein_coding		CHR_MG209_PATCH	1	47368892	531
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000229094	retained_intron		CHR_MG209_PATCH	1	47368897	469
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000229021	protein_coding		CHR_MG209_PATCH	1	47369196	1113
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000230548	protein_coding		CHR_MG209_PATCH	1	47369196	1109
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000229624	retained_intron		CHR_MG209_PATCH	1	47370107	684
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000230164	processed_transcript		CHR_MG209_PATCH	1	47371711	405
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000230707	retained_intron		CHR_MG209_PATCH	1	47372470	779
ENSMUSG00000116070	protein_coding	Mrps10	ENSMUST00000229358	retained_intron		CHR_MG209_PATCH	1	47375470	3878
ENSMUSG00000116144	pseudogene	AL669898.1	ENSMUST00000229816	pseudogene		CHR_MG3231_PATCH	-1	60667867	1011
ENSMUSG00000116148	processed_pseudogene	Gm5814	ENSMUST00000230260	processed_pseudogene		CHR_MG209_PATCH	1	47410362	375
ENSMUSG00000116235	protein_coding	Trerf1	ENSMUST00000230995	protein_coding		CHR_MG209_PATCH	1	47314067	3615
ENSMUSG00000116235	protein_coding	Trerf1	ENSMUST00000230465	protein_coding		CHR_MG209_PATCH	1	47314067	3615
ENSMUSG00000116252	protein_coding	MF597757.1	ENSMUST00000229293	protein_coding		CHR_MG3490_PATCH	-1	112775218	2310
ENSMUSG00000116252	protein_coding	MF597757.1	ENSMUST00000231146	protein_coding		CHR_MG3490_PATCH	-1	112775218	2310
ENSMUSG00000116258	protein_coding	Pld4	ENSMUST00000229174	protein_coding		CHR_MG3490_PATCH	1	112760655	1982
ENSMUSG00000116258	protein_coding	Pld4	ENSMUST00000230586	retained_intron		CHR_MG3490_PATCH	1	112760666	671
ENSMUSG00000116258	protein_coding	Pld4	ENSMUST00000230759	processed_transcript		CHR_MG3490_PATCH	1	112761676	2182
ENSMUSG00000116258	protein_coding	Pld4	ENSMUST00000230223	retained_intron		CHR_MG3490_PATCH	1	112765090	693
ENSMUSG00000116258	protein_coding	Pld4	ENSMUST00000230862	retained_intron		CHR_MG3490_PATCH	1	112766544	424
ENSMUSG00000116266	protein_coding	Guca1b	ENSMUST00000229925	protein_coding		CHR_MG209_PATCH	1	47385392	1668
ENSMUSG00000116266	protein_coding	Guca1b	ENSMUST00000230824	protein_coding		CHR_MG209_PATCH	1	47385403	1556
ENSMUSG00000116346	processed_pseudogene	Gm5189	ENSMUST00000229404	processed_pseudogene		CHR_MG3490_PATCH	-1	112751531	261
ENSMUSG00000116407	miRNA	Mir6940	ENSMUST00000230848	miRNA		CHR_MG3490_PATCH	1	112733322	70
ENSMUSG00000116418	protein_coding	Guca1a	ENSMUST00000229460	protein_coding		CHR_MG209_PATCH	-1	47400583	873
ENSMUSG00000116497	pseudogene	AL669898.2	ENSMUST00000229319	pseudogene		CHR_MG3231_PATCH	-1	60669365	288
ENSMUSG00000118455	protein_coding	Gm50461	ENSMUST00000238325	nonsense_mediated_decay		CHR_MG209_PATCH	-1	47421879	1004
ENSMUSG00000118567	unitary_pseudogene	Gm32514	ENSMUST00000239101	unitary_pseudogene		CHR_MG191_PATCH	-1	90893198	533
ENSMUSG00000106700	protein_coding	Mup14	ENSMUST00000201531	protein_coding		CHR_MG3562_PATCH	-1	61303802	741
ENSMUSG00000106700	protein_coding	Mup14	ENSMUST00000202193	protein_coding		CHR_MG3562_PATCH	-1	61304000	925
ENSMUSG00000106700	protein_coding	Mup14	ENSMUST00000201465	retained_intron		CHR_MG3562_PATCH	-1	61303365	817
ENSMUSG00000106700	protein_coding	Mup14	ENSMUST00000201224	protein_coding		CHR_MG3562_PATCH	-1	61303998	652
ENSMUSG00000106731	unprocessed_pseudogene	Gm12893	ENSMUST00000201472	unprocessed_pseudogene		CHR_MG3609_PATCH	1	122234979	275
ENSMUSG00000106882	protein_coding	Mup16	ENSMUST00000201756	protein_coding		CHR_MG3562_PATCH	-1	61481769	927
ENSMUSG00000106882	protein_coding	Mup16	ENSMUST00000201846	protein_coding		CHR_MG3562_PATCH	-1	61481705	721
ENSMUSG00000106886	processed_pseudogene	Mup-ps28	ENSMUST00000202754	processed_pseudogene		CHR_MG3561_PATCH	1	60345860	289
ENSMUSG00000106901	unprocessed_pseudogene	Mup-ps12	ENSMUST00000200975	unprocessed_pseudogene		CHR_MG3562_PATCH	1	61414482	549
ENSMUSG00000106908	unprocessed_pseudogene	Mup-ps10	ENSMUST00000200809	unprocessed_pseudogene		CHR_MG3562_PATCH	1	61243577	556
ENSMUSG00000106922	protein_coding	Mup13	ENSMUST00000202240	protein_coding		CHR_MG3562_PATCH	-1	61228271	925
ENSMUSG00000106922	protein_coding	Mup13	ENSMUST00000201591	protein_coding		CHR_MG3562_PATCH	-1	61228286	984
ENSMUSG00000106949	processed_pseudogene	Gm12895	ENSMUST00000201828	processed_pseudogene		CHR_MG3609_PATCH	1	122515734	226
ENSMUSG00000106984	unprocessed_pseudogene	Mup-ps4	ENSMUST00000201731	unprocessed_pseudogene		CHR_MG3561_PATCH	1	60393361	539
ENSMUSG00000107077	unprocessed_pseudogene	Mup-ps11	ENSMUST00000201504	unprocessed_pseudogene		CHR_MG3562_PATCH	1	61318730	545
ENSMUSG00000107095	unprocessed_pseudogene	Mup-ps9	ENSMUST00000202014	unprocessed_pseudogene		CHR_MG3562_PATCH	1	61163063	545
ENSMUSG00000107124	processed_pseudogene	Mup-ps26	ENSMUST00000202587	processed_pseudogene		CHR_MG3561_PATCH	1	60435407	202
ENSMUSG00000107186	processed_pseudogene	Mup-ps29	ENSMUST00000201989	processed_pseudogene		CHR_MG3561_PATCH	1	60340493	202
ENSMUSG00000107188	protein_coding	Mup9	ENSMUST00000202863	protein_coding		CHR_MG3561_PATCH	-1	60377933	864
ENSMUSG00000107188	protein_coding	Mup9	ENSMUST00000202428	protein_coding		CHR_MG3561_PATCH	-1	60377937	909
ENSMUSG00000107188	protein_coding	Mup9	ENSMUST00000202040	retained_intron		CHR_MG3561_PATCH	-1	60376583	369
ENSMUSG00000107188	protein_coding	Mup9	ENSMUST00000200698	retained_intron		CHR_MG3561_PATCH	-1	60376894	787
ENSMUSG00000107188	protein_coding	Mup9	ENSMUST00000202367	protein_coding		CHR_MG3561_PATCH	-1	60377932	721
ENSMUSG00000107188	protein_coding	Mup9	ENSMUST00000202041	protein_coding		CHR_MG3561_PATCH	-1	60377943	598
ENSMUSG00000107188	protein_coding	Mup9	ENSMUST00000202083	retained_intron		CHR_MG3561_PATCH	-1	60377951	720
ENSMUSG00000107188	protein_coding	Mup9	ENSMUST00000202821	processed_transcript		CHR_MG3561_PATCH	-1	60377949	338
ENSMUSG00000107196	unprocessed_pseudogene	Mup-ps13	ENSMUST00000202689	unprocessed_pseudogene		CHR_MG3562_PATCH	1	61496468	545
ENSMUSG00000107311	protein_coding	Mup15	ENSMUST00000202668	protein_coding		CHR_MG3562_PATCH	-1	61401981	925
ENSMUSG00000110871	processed_pseudogene	Gm28239	ENSMUST00000215979	processed_pseudogene		CHR_MG3496_PATCH	1	22237849	447
ENSMUSG00000110921	pseudogene	CR550303.1	ENSMUST00000214949	pseudogene		CHR_MG3562_PATCH	-1	61324061	375
ENSMUSG00000110971	protein_coding	AC117188.1	ENSMUST00000214914	protein_coding		CHR_MG3496_PATCH	-1	22733382	366
ENSMUSG00000110971	protein_coding	AC117188.1	ENSMUST00000229506	protein_coding		CHR_MG3496_PATCH	-1	22733382	366
ENSMUSG00000110994	pseudogene	CR536609.1	ENSMUST00000215857	pseudogene		CHR_MG3618_PATCH	-1	99989711	1011
ENSMUSG00000111024	pseudogene	CU041226.1	ENSMUST00000216680	pseudogene		CHR_MG3609_PATCH	1	122304779	375
ENSMUSG00000111516	pseudogene	CR954983.1	ENSMUST00000215209	pseudogene		CHR_MG3683_PATCH	-1	53451837	303
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000216920	protein_coding		CHR_MG3496_PATCH	-1	22774581	5954
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000213599	protein_coding		CHR_MG3496_PATCH	-1	22774581	6107
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000215629	protein_coding		CHR_MG3496_PATCH	-1	22774581	6446
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000215955	protein_coding		CHR_MG3496_PATCH	-1	22774581	6362
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000215260	protein_coding		CHR_MG3496_PATCH	-1	22774581	6179
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000217467	protein_coding		CHR_MG3496_PATCH	-1	22315805	2294
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000217075	protein_coding		CHR_MG3496_PATCH	-1	22432870	2189
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000239277	processed_transcript		CHR_MG3496_PATCH	-1	22478279	863
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000217477	protein_coding		CHR_MG3496_PATCH	-1	22774581	2411
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000239211	protein_coding		CHR_MG3496_PATCH	-1	22481386	516
ENSMUSG00000111628	protein_coding	Rims1	ENSMUST00000217791	protein_coding		CHR_MG3496_PATCH	-1	22774851	1434
ENSMUSG00000111650	processed_pseudogene	Gm26866	ENSMUST00000213155	processed_pseudogene		CHR_MG3496_PATCH	1	22709621	802
ENSMUSG00000115851	processed_pseudogene	Gm14592	ENSMUST00000229100	processed_pseudogene		CHR_MG3683_PATCH	1	53536369	560
ENSMUSG00000115861	protein_coding	Arf4	ENSMUST00000230068	protein_coding		CHR_MG3627_PATCH	1	26638074	2165
ENSMUSG00000115861	protein_coding	Arf4	ENSMUST00000230795	nonsense_mediated_decay		CHR_MG3627_PATCH	1	26638226	1582
ENSMUSG00000115861	protein_coding	Arf4	ENSMUST00000229548	retained_intron		CHR_MG3627_PATCH	1	26638243	1034
ENSMUSG00000115861	protein_coding	Arf4	ENSMUST00000230300	processed_transcript		CHR_MG3627_PATCH	1	26638253	1345
ENSMUSG00000115861	protein_coding	Arf4	ENSMUST00000229732	protein_coding		CHR_MG3627_PATCH	1	26638347	1367
ENSMUSG00000115861	protein_coding	Arf4	ENSMUST00000230369	retained_intron		CHR_MG3627_PATCH	1	26653011	188
ENSMUSG00000115861	protein_coding	Arf4	ENSMUST00000231219	nonsense_mediated_decay		CHR_MG3627_PATCH	1	26653131	700
ENSMUSG00000115870	protein_coding	Mucl1	ENSMUST00000230804	protein_coding		CHR_MG3648_PATCH	-1	103877308	758
ENSMUSG00000115870	protein_coding	Mucl1	ENSMUST00000230335	protein_coding		CHR_MG3648_PATCH	-1	103877278	621
ENSMUSG00000115881	lncRNA	Gm32364	ENSMUST00000229343	lncRNA		CHR_MG3530_PATCH	1	67575912	485
ENSMUSG00000115884	protein_coding	Haus1	ENSMUST00000237090	protein_coding		CHR_MG3700_PATCH	-1	77773886	1226
ENSMUSG00000115884	protein_coding	Haus1	ENSMUST00000231055	protein_coding		CHR_MG3700_PATCH	-1	77767780	1003
ENSMUSG00000115884	protein_coding	Haus1	ENSMUST00000235194	retained_intron		CHR_MG3700_PATCH	-1	77767786	6882
ENSMUSG00000115892	protein_coding	FO082317.1	ENSMUST00000229362	protein_coding		CHR_MG3648_PATCH	-1	103813782	414
ENSMUSG00000115892	protein_coding	FO082317.1	ENSMUST00000229704	protein_coding		CHR_MG3648_PATCH	-1	103813782	414
ENSMUSG00000115897	lncRNA	4930563J15Rik	ENSMUST00000230216	lncRNA		CHR_MG3530_PATCH	-1	67572018	3468
ENSMUSG00000115897	lncRNA	4930563J15Rik	ENSMUST00000229530	lncRNA		CHR_MG3530_PATCH	-1	67570067	560
ENSMUSG00000115897	lncRNA	4930563J15Rik	ENSMUST00000229266	lncRNA		CHR_MG3530_PATCH	-1	67571988	574
ENSMUSG00000115904	protein_coding	Itgb3bp	ENSMUST00000230193	protein_coding		CHR_MG3618_PATCH	-1	99829186	2806
ENSMUSG00000115904	protein_coding	Itgb3bp	ENSMUST00000230967	processed_transcript		CHR_MG3618_PATCH	-1	99898773	3387
ENSMUSG00000115904	protein_coding	Itgb3bp	ENSMUST00000231205	processed_transcript		CHR_MG3618_PATCH	-1	99829092	716
ENSMUSG00000115904	protein_coding	Itgb3bp	ENSMUST00000230324	processed_transcript		CHR_MG3618_PATCH	-1	99829134	720
ENSMUSG00000115904	protein_coding	Itgb3bp	ENSMUST00000229851	processed_transcript		CHR_MG3618_PATCH	-1	99829090	346
ENSMUSG00000115910	pseudogene	AC122494.1	ENSMUST00000230922	pseudogene		CHR_MG3712_PATCH	-1	50702093	288
ENSMUSG00000115915	processed_pseudogene	Gm14600	ENSMUST00000230916	processed_pseudogene		CHR_MG3683_PATCH	1	53546426	630
ENSMUSG00000115922	lncRNA	9930004E17Rik	ENSMUST00000229774	lncRNA		CHR_MG3627_PATCH	1	26670010	498
ENSMUSG00000115933	pseudogene	CT571246.1	ENSMUST00000229540	pseudogene		CHR_MG3561_PATCH	1	60363634	1662
ENSMUSG00000115942	protein_coding	Nrbf2	ENSMUST00000229557	protein_coding		CHR_MG3530_PATCH	-1	67285305	1813
ENSMUSG00000115942	protein_coding	Nrbf2	ENSMUST00000230388	protein_coding		CHR_MG3530_PATCH	-1	67285180	583
ENSMUSG00000115978	processed_pseudogene	Gm47516	ENSMUST00000231145	processed_pseudogene		CHR_MG3530_PATCH	-1	67348962	160
ENSMUSG00000115994	lncRNA	Gm12682	ENSMUST00000230754	lncRNA		CHR_MG3618_PATCH	-1	99712972	1081
ENSMUSG00000115995	protein_coding	Rtl8c	ENSMUST00000230227	protein_coding		CHR_MG3683_PATCH	1	53521122	401
ENSMUSG00000116023	protein_coding	Epg5	ENSMUST00000230263	protein_coding		CHR_MG3700_PATCH	1	77893980	9660
ENSMUSG00000116023	protein_coding	Epg5	ENSMUST00000236989	processed_transcript		CHR_MG3700_PATCH	1	77910725	3149
ENSMUSG00000116023	protein_coding	Epg5	ENSMUST00000237508	retained_intron		CHR_MG3700_PATCH	1	77985704	573
ENSMUSG00000116027	lncRNA	Gm47531	ENSMUST00000230097	lncRNA		CHR_MG3530_PATCH	-1	67442699	426
ENSMUSG00000116035	protein_coding	Pstpip2	ENSMUST00000236157	protein_coding		CHR_MG3700_PATCH	1	77789914	1056
ENSMUSG00000116035	protein_coding	Pstpip2	ENSMUST00000230626	protein_coding		CHR_MG3700_PATCH	1	77794545	2267
ENSMUSG00000116051	protein_coding	Dgkk	ENSMUST00000229799	protein_coding		CHR_MG3656_PATCH	1	6779049	7155
ENSMUSG00000116051	protein_coding	Dgkk	ENSMUST00000228997	protein_coding		CHR_MG3656_PATCH	1	6827669	6827
ENSMUSG00000116077	processed_pseudogene	Gm49491	ENSMUST00000230587	processed_pseudogene		CHR_MG3648_PATCH	-1	103926749	265
ENSMUSG00000116084	protein_coding	Clba1	ENSMUST00000231188	protein_coding		CHR_MG3490_PATCH	1	112806123	1960
ENSMUSG00000116084	protein_coding	Clba1	ENSMUST00000231203	protein_coding		CHR_MG3490_PATCH	1	112806161	1207
ENSMUSG00000116085	pseudogene	AC117188.2	ENSMUST00000214243	pseudogene		CHR_MG3496_PATCH	-1	22842348	612
ENSMUSG00000116087	TEC	Gm10797	ENSMUST00000229205	TEC		CHR_MG3530_PATCH	1	67572071	2222
ENSMUSG00000116098	lncRNA	Gm32255	ENSMUST00000230691	lncRNA		CHR_MG3530_PATCH	-1	67497736	1349
ENSMUSG00000116103	protein_coding	Rtl8a	ENSMUST00000230773	protein_coding		CHR_MG3683_PATCH	-1	53556772	1195
ENSMUSG00000116105	snRNA	Gm26359	ENSMUST00000230528	snRNA		CHR_MG3530_PATCH	-1	67235961	101
ENSMUSG00000116110	pseudogene	BX936338.1	ENSMUST00000229072	pseudogene		CHR_MG3609_PATCH	-1	122511188	288
ENSMUSG00000116119	lncRNA	Gm49454	ENSMUST00000229216	lncRNA		CHR_MG3530_PATCH	1	67297406	643
ENSMUSG00000116126	miRNA	Gm22852	ENSMUST00000229848	miRNA		CHR_MG3648_PATCH	-1	103975358	101
ENSMUSG00000116139	lncRNA	Gm12688	ENSMUST00000230132	lncRNA		CHR_MG3618_PATCH	-1	99654983	701
ENSMUSG00000116152	protein_coding	Foxd3	ENSMUST00000230639	protein_coding		CHR_MG3618_PATCH	1	99656299	2324
ENSMUSG00000116172	misc_RNA	Gm23954	ENSMUST00000230196	misc_RNA		CHR_MG3700_PATCH	-1	77806666	353
ENSMUSG00000116189	protein_coding	Gm14597	ENSMUST00000230850	protein_coding		CHR_MG3683_PATCH	-1	53493060	715
ENSMUSG00000116189	protein_coding	Gm14597	ENSMUST00000229306	protein_coding		CHR_MG3683_PATCH	-1	53522069	563
ENSMUSG00000116193	unprocessed_pseudogene	Gm49274	ENSMUST00000230908	unprocessed_pseudogene		CHR_MG3648_PATCH	-1	103661512	408
ENSMUSG00000116195	lncRNA	A330094K24Rik	ENSMUST00000229415	lncRNA		CHR_MG3700_PATCH	-1	77732739	1269
ENSMUSG00000116198	pseudogene	4930465K10Rik	ENSMUST00000230001	pseudogene		CHR_MG3700_PATCH	1	77714210	1238
ENSMUSG00000116201	protein_coding	Efcab7	ENSMUST00000229026	protein_coding		CHR_MG3618_PATCH	1	99829198	448
ENSMUSG00000116201	protein_coding	Efcab7	ENSMUST00000229349	protein_coding		CHR_MG3618_PATCH	1	99829440	306
ENSMUSG00000116201	protein_coding	Efcab7	ENSMUST00000230787	protein_coding		CHR_MG3618_PATCH	1	99829500	243
ENSMUSG00000116201	protein_coding	Efcab7	ENSMUST00000230123	protein_coding		CHR_MG3618_PATCH	1	99831394	1713
ENSMUSG00000116201	protein_coding	Efcab7	ENSMUST00000229144	protein_coding		CHR_MG3618_PATCH	1	99847053	1579
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000229412	protein_coding		CHR_MG3686_PATCH	-1	111329134	3867
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000229806	protein_coding		CHR_MG3686_PATCH	-1	111329286	4151
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000230618	protein_coding		CHR_MG3686_PATCH	-1	111329286	4135
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000229157	protein_coding		CHR_MG3686_PATCH	-1	111352873	4170
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000229688	protein_coding		CHR_MG3686_PATCH	-1	111329196	2410
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000229913	protein_coding		CHR_MG3686_PATCH	-1	111352852	486
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000228999	protein_coding		CHR_MG3686_PATCH	-1	111329546	798
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000230443	protein_coding		CHR_MG3686_PATCH	-1	111397267	701
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000230947	nonsense_mediated_decay		CHR_MG3686_PATCH	-1	111328730	447
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000230170	protein_coding		CHR_MG3686_PATCH	-1	111404038	644
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000229401	protein_coding		CHR_MG3686_PATCH	-1	111404050	639
ENSMUSG00000116203	protein_coding	Rps6ka6	ENSMUST00000229654	protein_coding		CHR_MG3686_PATCH	-1	111402433	507
ENSMUSG00000116205	snoRNA	Gm26014	ENSMUST00000231052	snoRNA		CHR_MG3700_PATCH	1	77682614	132
ENSMUSG00000116208	protein_coding	Asb14	ENSMUST00000238904	protein_coding		CHR_MG3627_PATCH	1	26895359	2062
ENSMUSG00000116208	protein_coding	Asb14	ENSMUST00000239039	protein_coding		CHR_MG3627_PATCH	1	26895404	1817
ENSMUSG00000116208	protein_coding	Asb14	ENSMUST00000230624	protein_coding		CHR_MG3627_PATCH	1	26895406	2015
ENSMUSG00000116208	protein_coding	Asb14	ENSMUST00000230074	protein_coding		CHR_MG3627_PATCH	1	26895406	1815
ENSMUSG00000116208	protein_coding	Asb14	ENSMUST00000229107	processed_transcript		CHR_MG3627_PATCH	1	26895414	709
ENSMUSG00000116208	protein_coding	Asb14	ENSMUST00000231129	nonsense_mediated_decay		CHR_MG3627_PATCH	1	26895422	650
ENSMUSG00000116208	protein_coding	Asb14	ENSMUST00000229917	nonsense_mediated_decay		CHR_MG3627_PATCH	1	26904045	1432
ENSMUSG00000116230	protein_coding	Dennd6a	ENSMUST00000229872	protein_coding		CHR_MG3627_PATCH	1	26573856	2775
ENSMUSG00000116230	protein_coding	Dennd6a	ENSMUST00000230137	protein_coding		CHR_MG3627_PATCH	1	26573858	2424
ENSMUSG00000116230	protein_coding	Dennd6a	ENSMUST00000229167	protein_coding		CHR_MG3627_PATCH	1	26573859	2692
ENSMUSG00000116230	protein_coding	Dennd6a	ENSMUST00000229714	protein_coding		CHR_MG3627_PATCH	1	26579561	2677
ENSMUSG00000116230	protein_coding	Dennd6a	ENSMUST00000230685	protein_coding		CHR_MG3627_PATCH	1	26579578	6638
ENSMUSG00000116230	protein_coding	Dennd6a	ENSMUST00000229335	processed_transcript		CHR_MG3627_PATCH	1	26604671	738
ENSMUSG00000116233	unprocessed_pseudogene	4933416I08Rik	ENSMUST00000230805	unprocessed_pseudogene		CHR_MG3683_PATCH	1	53599727	703
ENSMUSG00000116251	protein_coding	Pde12	ENSMUST00000229936	protein_coding		CHR_MG3627_PATCH	-1	26669883	7725
ENSMUSG00000116264	protein_coding	Siglec15	ENSMUST00000230556	protein_coding		CHR_MG3700_PATCH	-1	78012910	1156
ENSMUSG00000116276	protein_coding	Atp5a1	ENSMUST00000231086	protein_coding		CHR_MG3700_PATCH	1	77773729	2471
ENSMUSG00000116276	protein_coding	Atp5a1	ENSMUST00000229284	protein_coding		CHR_MG3700_PATCH	1	77773956	2674
ENSMUSG00000116276	protein_coding	Atp5a1	ENSMUST00000230776	nonsense_mediated_decay		CHR_MG3700_PATCH	1	77773992	774
ENSMUSG00000116276	protein_coding	Atp5a1	ENSMUST00000229172	retained_intron		CHR_MG3700_PATCH	1	77778955	765
ENSMUSG00000116276	protein_coding	Atp5a1	ENSMUST00000230240	retained_intron		CHR_MG3700_PATCH	1	77779832	816
ENSMUSG00000116279	snoRNA	Gm24503	ENSMUST00000229810	snoRNA		CHR_MG3712_PATCH	-1	50791687	135
ENSMUSG00000116312	miRNA	Gm23366	ENSMUST00000230597	miRNA		CHR_MG3618_PATCH	1	99657742	89
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000230142	retained_intron		CHR_MG3530_PATCH	1	67096125	2772
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000229785	retained_intron		CHR_MG3530_PATCH	1	67096405	651
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000229211	protein_coding		CHR_MG3530_PATCH	1	67096492	3076
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000230184	protein_coding		CHR_MG3530_PATCH	1	67127258	8377
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000229188	protein_coding		CHR_MG3530_PATCH	1	67127258	8382
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000229277	retained_intron		CHR_MG3530_PATCH	1	67185748	6003
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000230179	retained_intron		CHR_MG3530_PATCH	1	67185749	1579
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000230394	protein_coding		CHR_MG3530_PATCH	1	67185750	8609
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000229482	retained_intron		CHR_MG3530_PATCH	1	67185753	2574
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000230944	retained_intron		CHR_MG3530_PATCH	1	67217740	522
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000230304	processed_transcript		CHR_MG3530_PATCH	1	67238148	2015
ENSMUSG00000116315	protein_coding	Jmjd1c	ENSMUST00000229761	retained_intron		CHR_MG3530_PATCH	1	67238922	2365
ENSMUSG00000116322	pseudogene	FO082317.2	ENSMUST00000229809	pseudogene		CHR_MG3648_PATCH	1	103748730	288
ENSMUSG00000116340	pseudogene	AC225888.1	ENSMUST00000230404	pseudogene		CHR_MG3648_PATCH	1	103902628	1674
ENSMUSG00000116361	processed_pseudogene	Gm49273	ENSMUST00000229250	processed_pseudogene		CHR_MG3648_PATCH	1	103657839	3843
ENSMUSG00000116362	protein_coding	Cylc1	ENSMUST00000230730	protein_coding		CHR_MG3686_PATCH	1	111110418	1969
ENSMUSG00000116362	protein_coding	Cylc1	ENSMUST00000229715	protein_coding		CHR_MG3686_PATCH	1	111110458	1923
ENSMUSG00000116363	protein_coding	Rtl8b	ENSMUST00000229467	protein_coding		CHR_MG3683_PATCH	-1	53583498	1232
ENSMUSG00000116369	processed_pseudogene	Gm21178	ENSMUST00000231149	processed_pseudogene		CHR_MG3648_PATCH	1	103949091	728
ENSMUSG00000116373	protein_coding	Slc14a1	ENSMUST00000229465	protein_coding		CHR_MG3700_PATCH	-1	78078941	3665
ENSMUSG00000116373	protein_coding	Slc14a1	ENSMUST00000230088	protein_coding		CHR_MG3700_PATCH	-1	78078846	2217
ENSMUSG00000116373	protein_coding	Slc14a1	ENSMUST00000229681	protein_coding		CHR_MG3700_PATCH	-1	78097634	2047
ENSMUSG00000116381	lncRNA	Gm32023	ENSMUST00000230609	lncRNA		CHR_MG3530_PATCH	1	67423525	661
ENSMUSG00000116382	protein_coding	Alg6	ENSMUST00000230655	retained_intron		CHR_MG3618_PATCH	1	99715664	3607
ENSMUSG00000116382	protein_coding	Alg6	ENSMUST00000230876	retained_intron		CHR_MG3618_PATCH	1	99715665	3947
ENSMUSG00000116382	protein_coding	Alg6	ENSMUST00000228995	protein_coding		CHR_MG3618_PATCH	1	99715665	3079
ENSMUSG00000116382	protein_coding	Alg6	ENSMUST00000230646	processed_transcript		CHR_MG3618_PATCH	1	99715676	378
ENSMUSG00000116382	protein_coding	Alg6	ENSMUST00000229664	protein_coding		CHR_MG3618_PATCH	1	99715676	766
ENSMUSG00000116382	protein_coding	Alg6	ENSMUST00000230570	protein_coding		CHR_MG3618_PATCH	1	99715676	628
ENSMUSG00000116382	protein_coding	Alg6	ENSMUST00000228988	retained_intron		CHR_MG3618_PATCH	1	99719152	517
ENSMUSG00000116392	pseudogene	AC126553.1	ENSMUST00000230852	pseudogene		CHR_MG3700_PATCH	-1	78023583	159
ENSMUSG00000116415	pseudogene	AC174929.1	ENSMUST00000230996	pseudogene		CHR_MG3712_PATCH	1	50796221	159
ENSMUSG00000116427	pseudogene	AC174929.2	ENSMUST00000229305	pseudogene		CHR_MG3712_PATCH	-1	50817114	279
ENSMUSG00000116436	miRNA	Mir7672	ENSMUST00000229565	miRNA		CHR_MG3627_PATCH	-1	26669608	62
ENSMUSG00000116443	unprocessed_pseudogene	Gm49275	ENSMUST00000229487	unprocessed_pseudogene		CHR_MG3648_PATCH	-1	103661982	97
ENSMUSG00000116451	protein_coding	Dnah12	ENSMUST00000230957	protein_coding		CHR_MG3627_PATCH	1	26693274	12009
ENSMUSG00000116451	protein_coding	Dnah12	ENSMUST00000229001	protein_coding		CHR_MG3627_PATCH	1	26771831	611
ENSMUSG00000116452	lncRNA	F830208F22Rik	ENSMUST00000230567	lncRNA		CHR_MG3700_PATCH	-1	77796743	2891
ENSMUSG00000116452	lncRNA	F830208F22Rik	ENSMUST00000229960	lncRNA		CHR_MG3700_PATCH	-1	77796390	2355
ENSMUSG00000116458	protein_coding	Egr2	ENSMUST00000230502	protein_coding		CHR_MG3530_PATCH	1	67535504	773
ENSMUSG00000116458	protein_coding	Egr2	ENSMUST00000231112	protein_coding		CHR_MG3530_PATCH	1	67535612	902
ENSMUSG00000116458	protein_coding	Egr2	ENSMUST00000229738	protein_coding		CHR_MG3530_PATCH	1	67537898	2965
ENSMUSG00000116458	protein_coding	Egr2	ENSMUST00000231046	protein_coding		CHR_MG3530_PATCH	1	67537899	2864
ENSMUSG00000116458	protein_coding	Egr2	ENSMUST00000230811	protein_coding		CHR_MG3530_PATCH	1	67537899	427
ENSMUSG00000116458	protein_coding	Egr2	ENSMUST00000229944	protein_coding		CHR_MG3530_PATCH	1	67537959	356
ENSMUSG00000116458	protein_coding	Egr2	ENSMUST00000231082	protein_coding		CHR_MG3530_PATCH	1	67538712	2665
ENSMUSG00000116466	protein_coding	Pgm1	ENSMUST00000229148	protein_coding		CHR_MG3618_PATCH	1	99898374	2371
ENSMUSG00000116466	protein_coding	Pgm1	ENSMUST00000231127	protein_coding		CHR_MG3618_PATCH	1	99924704	2523
ENSMUSG00000116473	protein_coding	8030462N17Rik	ENSMUST00000229523	protein_coding		CHR_MG3700_PATCH	-1	77713933	5125
ENSMUSG00000116473	protein_coding	8030462N17Rik	ENSMUST00000237163	protein_coding		CHR_MG3700_PATCH	-1	77714486	1606
ENSMUSG00000116473	protein_coding	8030462N17Rik	ENSMUST00000237420	retained_intron		CHR_MG3700_PATCH	-1	77713983	2571
ENSMUSG00000116477	protein_coding	MF597757.2	ENSMUST00000231111	protein_coding		CHR_MG3490_PATCH	-1	112799712	5220
ENSMUSG00000116477	protein_coding	MF597757.2	ENSMUST00000230761	protein_coding		CHR_MG3490_PATCH	-1	112799712	5220
ENSMUSG00000116486	protein_coding	Ado	ENSMUST00000229481	protein_coding		CHR_MG3530_PATCH	-1	67549097	4558
ENSMUSG00000116501	protein_coding	Mucl2	ENSMUST00000230689	protein_coding		CHR_MG3648_PATCH	-1	104021151	639
ENSMUSG00000116501	protein_coding	Mucl2	ENSMUST00000230999	protein_coding		CHR_MG3648_PATCH	-1	104021129	823
ENSMUSG00000116511	lncRNA	Arf4os	ENSMUST00000230452	lncRNA		CHR_MG3627_PATCH	-1	26638183	566
ENSMUSG00000116512	snRNA	Gm26425	ENSMUST00000229178	snRNA		CHR_MG3618_PATCH	1	99878757	82
ENSMUSG00000116515	processed_pseudogene	Gm10112	ENSMUST00000229895	processed_pseudogene		CHR_MG3686_PATCH	1	111166058	349
ENSMUSG00000116524	protein_coding	Ccnb3	ENSMUST00000229659	protein_coding		CHR_MG3656_PATCH	-1	6995804	4554
ENSMUSG00000116524	protein_coding	Ccnb3	ENSMUST00000230350	protein_coding		CHR_MG3656_PATCH	-1	6985121	4475
ENSMUSG00000118359	lncRNA	Gm31933	ENSMUST00000237547	lncRNA		CHR_MG3699_PATCH	-1	76587494	1882
ENSMUSG00000096951	protein_coding	Pdpn	ENSMUST00000181754	protein_coding		CHR_MG4136_PATCH	-1	143299564	1817
ENSMUSG00000096951	protein_coding	Pdpn	ENSMUST00000181012	protein_coding		CHR_MG4136_PATCH	-1	143299463	762
ENSMUSG00000096961	processed_pseudogene	Eef2-ps2	ENSMUST00000181923	processed_pseudogene		CHR_MG4136_PATCH	-1	143243368	1345
ENSMUSG00000097046	protein_coding	Gm13043	ENSMUST00000181513	protein_coding		CHR_MG4136_PATCH	1	143511343	2055
ENSMUSG00000097105	processed_pseudogene	Gm13042	ENSMUST00000181783	processed_pseudogene		CHR_MG4136_PATCH	-1	143460538	1955
ENSMUSG00000097153	protein_coding	Oog4	ENSMUST00000180552	protein_coding		CHR_MG4136_PATCH	-1	143450324	1981
ENSMUSG00000097153	protein_coding	Oog4	ENSMUST00000180702	protein_coding		CHR_MG4136_PATCH	-1	143450304	1817
ENSMUSG00000097192	protein_coding	Gm13057	ENSMUST00000181004	protein_coding		CHR_MG4136_PATCH	1	143527071	2093
ENSMUSG00000097297	protein_coding	Nlrp12	ENSMUST00000181320	protein_coding		CHR_MG4151_PATCH	-1	3248243	6928
ENSMUSG00000097297	protein_coding	Nlrp12	ENSMUST00000203944	retained_intron		CHR_MG4151_PATCH	-1	3248370	2742
ENSMUSG00000097351	protein_coding	Lrrc38	ENSMUST00000181564	protein_coding		CHR_MG4136_PATCH	1	143349757	2324
ENSMUSG00000097359	unprocessed_pseudogene	Gm13045	ENSMUST00000180724	unprocessed_pseudogene		CHR_MG4136_PATCH	1	143402344	712
ENSMUSG00000097475	unprocessed_pseudogene	Gm13041	ENSMUST00000181878	unprocessed_pseudogene		CHR_MG4136_PATCH	1	143499435	1524
ENSMUSG00000097478	processed_pseudogene	Anp32b-ps1	ENSMUST00000181922	processed_pseudogene		CHR_MG4136_PATCH	1	143389659	758
ENSMUSG00000097549	unprocessed_pseudogene	Gm13046	ENSMUST00000181902	unprocessed_pseudogene		CHR_MG4136_PATCH	-1	143464774	501
ENSMUSG00000097606	unprocessed_pseudogene	Gm3104	ENSMUST00000180736	unprocessed_pseudogene		CHR_MG4151_PATCH	1	3086001	473
ENSMUSG00000097647	misc_RNA	Gm26313	ENSMUST00000180493	misc_RNA		CHR_MG4136_PATCH	1	143340399	308
ENSMUSG00000097778	protein_coding	Pramef8	ENSMUST00000180619	protein_coding		CHR_MG4136_PATCH	1	143412426	3886
ENSMUSG00000097778	protein_coding	Pramef8	ENSMUST00000181624	protein_coding		CHR_MG4136_PATCH	1	143412972	343
ENSMUSG00000097778	protein_coding	Pramef8	ENSMUST00000180614	protein_coding		CHR_MG4136_PATCH	1	143412987	3260
ENSMUSG00000097778	protein_coding	Pramef8	ENSMUST00000181314	protein_coding		CHR_MG4136_PATCH	1	143413009	778
ENSMUSG00000097778	protein_coding	Pramef8	ENSMUST00000180510	processed_transcript		CHR_MG4136_PATCH	1	143413010	352
ENSMUSG00000097826	miRNA	Mir290a	ENSMUST00000181293	miRNA		CHR_MG4151_PATCH	1	3217300	83
ENSMUSG00000097856	protein_coding	BC080695	ENSMUST00000180918	protein_coding		CHR_MG4136_PATCH	1	143527062	2102
ENSMUSG00000097856	protein_coding	BC080695	ENSMUST00000181763	protein_coding		CHR_MG4136_PATCH	1	143567475	2095
ENSMUSG00000097880	protein_coding	Pramel1	ENSMUST00000181019	protein_coding		CHR_MG4136_PATCH	1	143394428	2794
ENSMUSG00000098301	protein_coding	Srsf1	ENSMUST00000183352	protein_coding		CHR_MG3829_PATCH	1	88047373	5362
ENSMUSG00000098301	protein_coding	Srsf1	ENSMUST00000193491	protein_coding		CHR_MG3829_PATCH	1	88047718	2948
ENSMUSG00000098301	protein_coding	Srsf1	ENSMUST00000195051	retained_intron		CHR_MG3829_PATCH	1	88047725	645
ENSMUSG00000098301	protein_coding	Srsf1	ENSMUST00000191711	protein_coding		CHR_MG3829_PATCH	1	88047803	1209
ENSMUSG00000098301	protein_coding	Srsf1	ENSMUST00000195802	nonsense_mediated_decay		CHR_MG3829_PATCH	1	88048567	896
ENSMUSG00000098301	protein_coding	Srsf1	ENSMUST00000195009	nonsense_mediated_decay		CHR_MG3829_PATCH	1	88048589	401
ENSMUSG00000098301	protein_coding	Srsf1	ENSMUST00000193754	retained_intron		CHR_MG3829_PATCH	1	88049412	759
ENSMUSG00000098375	protein_coding	Mrps23	ENSMUST00000183742	protein_coding		CHR_MG3829_PATCH	1	88204388	1332
ENSMUSG00000098375	protein_coding	Mrps23	ENSMUST00000195872	protein_coding		CHR_MG3829_PATCH	1	88204411	1404
ENSMUSG00000098375	protein_coding	Mrps23	ENSMUST00000192161	protein_coding		CHR_MG3829_PATCH	1	88204424	666
ENSMUSG00000098375	protein_coding	Mrps23	ENSMUST00000193526	protein_coding		CHR_MG3829_PATCH	1	88204424	332
ENSMUSG00000098375	protein_coding	Mrps23	ENSMUST00000192249	protein_coding		CHR_MG3829_PATCH	1	88204444	569
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000184457	nonsense_mediated_decay		CHR_MG3833_MG4220_PATCH	-1	18324450	1495
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000183630	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18344042	1622
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000184443	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18304145	898
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000232218	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18343906	744
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000231487	processed_transcript		CHR_MG3833_MG4220_PATCH	-1	18306121	483
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000232559	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18324423	496
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000231520	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18331471	724
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000231955	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18343897	714
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000184548	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18311453	639
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000183948	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18313034	600
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000232331	processed_transcript		CHR_MG3833_MG4220_PATCH	-1	18324451	377
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000184324	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18348103	632
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000184631	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18343902	496
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000184698	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18324451	518
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000231839	processed_transcript		CHR_MG3833_MG4220_PATCH	-1	18343932	387
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000185024	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18324451	520
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000183496	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18348083	3813
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000232672	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18343914	2519
ENSMUSG00000098377	protein_coding	Tango2	ENSMUST00000231665	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18339078	600
ENSMUSG00000098384	miRNA	Gm26219	ENSMUST00000184629	miRNA		CHR_MG3833_MG4220_PATCH	-1	18361506	71
ENSMUSG00000098546	protein_coding	Vezf1	ENSMUST00000183959	protein_coding		CHR_MG3829_PATCH	1	88068279	4583
ENSMUSG00000098546	protein_coding	Vezf1	ENSMUST00000194410	protein_coding		CHR_MG3829_PATCH	1	88073588	3915
ENSMUSG00000098554	miRNA	Mir185	ENSMUST00000184719	miRNA		CHR_MG3833_MG4220_PATCH	-1	18327465	65
ENSMUSG00000098571	protein_coding	Cuedc1	ENSMUST00000192598	processed_transcript		CHR_MG3829_PATCH	1	88098058	1505
ENSMUSG00000098571	protein_coding	Cuedc1	ENSMUST00000184231	protein_coding		CHR_MG3829_PATCH	1	88099146	3180
ENSMUSG00000098571	protein_coding	Cuedc1	ENSMUST00000192032	retained_intron		CHR_MG3829_PATCH	1	88099290	1844
ENSMUSG00000098571	protein_coding	Cuedc1	ENSMUST00000192539	nonsense_mediated_decay		CHR_MG3829_PATCH	1	88162261	3163
ENSMUSG00000098571	protein_coding	Cuedc1	ENSMUST00000194326	retained_intron		CHR_MG3829_PATCH	1	88182303	347
ENSMUSG00000098571	protein_coding	Cuedc1	ENSMUST00000192121	processed_transcript		CHR_MG3829_PATCH	1	88186009	325
ENSMUSG00000098571	protein_coding	Cuedc1	ENSMUST00000192329	retained_intron		CHR_MG3829_PATCH	1	88187821	805
ENSMUSG00000098615	protein_coding	Arvcf	ENSMUST00000184717	protein_coding		CHR_MG3833_MG4220_PATCH	1	18348182	4712
ENSMUSG00000098615	protein_coding	Arvcf	ENSMUST00000230969	protein_coding		CHR_MG3833_MG4220_PATCH	1	18348182	4712
ENSMUSG00000098615	protein_coding	Arvcf	ENSMUST00000230794	protein_coding		CHR_MG3833_MG4220_PATCH	1	18380784	4561
ENSMUSG00000098615	protein_coding	Arvcf	ENSMUST00000230355	protein_coding		CHR_MG3833_MG4220_PATCH	1	18380784	4561
ENSMUSG00000098681	protein_coding	Ccdc182	ENSMUST00000183390	protein_coding		CHR_MG3829_PATCH	1	88294058	1204
ENSMUSG00000098892	protein_coding	Comt	ENSMUST00000183626	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18414380	1978
ENSMUSG00000098892	protein_coding	Comt	ENSMUST00000185030	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18427738	1866
ENSMUSG00000098892	protein_coding	Comt	ENSMUST00000195169	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18427490	1397
ENSMUSG00000098892	protein_coding	Comt	ENSMUST00000193870	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18414380	743
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000183889	retained_intron		CHR_MG3833_MG4220_PATCH	1	18248679	2805
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000231976	retained_intron		CHR_MG3833_MG4220_PATCH	1	18248872	1377
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000183969	protein_coding		CHR_MG3833_MG4220_PATCH	1	18248883	2367
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000183589	protein_coding		CHR_MG3833_MG4220_PATCH	1	18248883	3520
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000184144	retained_intron		CHR_MG3833_MG4220_PATCH	1	18249002	2082
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000184496	retained_intron		CHR_MG3833_MG4220_PATCH	1	18249009	2553
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000184076	retained_intron		CHR_MG3833_MG4220_PATCH	1	18249009	2971
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000184895	protein_coding		CHR_MG3833_MG4220_PATCH	1	18249062	2235
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000232305	protein_coding		CHR_MG3833_MG4220_PATCH	1	18250011	290
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000185170	protein_coding		CHR_MG3833_MG4220_PATCH	1	18250021	842
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000183593	protein_coding		CHR_MG3833_MG4220_PATCH	1	18251422	276
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000232618	protein_coding		CHR_MG3833_MG4220_PATCH	1	18252125	603
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000183985	retained_intron		CHR_MG3833_MG4220_PATCH	1	18252221	603
ENSMUSG00000098930	protein_coding	Trmt2a	ENSMUST00000231933	retained_intron		CHR_MG3833_MG4220_PATCH	1	18252907	517
ENSMUSG00000099007	miRNA	Mir1306	ENSMUST00000183591	miRNA		CHR_MG3833_MG4220_PATCH	-1	18284317	79
ENSMUSG00000099028	miRNA	Gm24572	ENSMUST00000184145	miRNA		CHR_MG3833_MG4220_PATCH	-1	18284637	88
ENSMUSG00000099164	protein_coding	Ranbp1	ENSMUST00000183528	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18248732	1085
ENSMUSG00000099164	protein_coding	Ranbp1	ENSMUST00000185058	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18248067	923
ENSMUSG00000099164	protein_coding	Ranbp1	ENSMUST00000184634	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18248646	626
ENSMUSG00000099164	protein_coding	Ranbp1	ENSMUST00000185140	processed_transcript		CHR_MG3833_MG4220_PATCH	-1	18248434	599
ENSMUSG00000099277	snoRNA	Gm25777	ENSMUST00000183789	snoRNA		CHR_MG3833_MG4220_PATCH	-1	18240842	126
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000206213	protein_coding		CHR_MG3833_MG4220_PATCH	1	18427270	1866
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000206726	protein_coding		CHR_MG3833_MG4220_PATCH	1	18427303	1809
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000185160	protein_coding		CHR_MG3833_MG4220_PATCH	1	18427303	1905
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000192041	protein_coding		CHR_MG3833_MG4220_PATCH	1	18427324	1235
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000184600	protein_coding		CHR_MG3833_MG4220_PATCH	1	18427324	1878
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000194156	protein_coding		CHR_MG3833_MG4220_PATCH	1	18427324	1785
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000192971	nonsense_mediated_decay		CHR_MG3833_MG4220_PATCH	1	18427327	1800
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000205781	protein_coding		CHR_MG3833_MG4220_PATCH	1	18427331	2874
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000195523	protein_coding		CHR_MG3833_MG4220_PATCH	1	18427348	532
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000191617	protein_coding		CHR_MG3833_MG4220_PATCH	1	18429583	491
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000195150	protein_coding		CHR_MG3833_MG4220_PATCH	1	18429811	593
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000193952	protein_coding		CHR_MG3833_MG4220_PATCH	1	18441687	640
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000193831	processed_transcript		CHR_MG3833_MG4220_PATCH	1	18452925	720
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000192670	processed_transcript		CHR_MG3833_MG4220_PATCH	1	18452931	648
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000192360	processed_transcript		CHR_MG3833_MG4220_PATCH	1	18472707	266
ENSMUSG00000099282	protein_coding	Txnrd2	ENSMUST00000195189	processed_transcript		CHR_MG3833_MG4220_PATCH	1	18472737	403
ENSMUSG00000099333	snRNA	Gm26170	ENSMUST00000184340	snRNA		CHR_MG3833_MG4220_PATCH	1	18355616	148
ENSMUSG00000103450	lncRNA	Gm15764	ENSMUST00000192786	lncRNA		CHR_MG3833_MG4220_PATCH	1	18417568	672
ENSMUSG00000103450	lncRNA	Gm15764	ENSMUST00000192110	retained_intron		CHR_MG3833_MG4220_PATCH	1	18417771	230
ENSMUSG00000104005	lncRNA	Gm11508	ENSMUST00000194428	lncRNA		CHR_MG3829_PATCH	-1	88048006	440
ENSMUSG00000104246	lncRNA	Gm15892	ENSMUST00000195227	lncRNA		CHR_MG3829_PATCH	1	88059066	1001
ENSMUSG00000104246	lncRNA	Gm15892	ENSMUST00000195862	lncRNA		CHR_MG3829_PATCH	1	88066358	478
ENSMUSG00000104246	lncRNA	Gm15892	ENSMUST00000192132	lncRNA		CHR_MG3829_PATCH	1	88066418	439
ENSMUSG00000106687	protein_coding	Dgcr8	ENSMUST00000202260	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18289246	4320
ENSMUSG00000106687	protein_coding	Dgcr8	ENSMUST00000201668	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18284535	3436
ENSMUSG00000106687	protein_coding	Dgcr8	ENSMUST00000201170	processed_transcript		CHR_MG3833_MG4220_PATCH	-1	18265269	1246
ENSMUSG00000106687	protein_coding	Dgcr8	ENSMUST00000202885	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18257130	623
ENSMUSG00000106687	protein_coding	Dgcr8	ENSMUST00000232191	processed_transcript		CHR_MG3833_MG4220_PATCH	-1	18278066	293
ENSMUSG00000106687	protein_coding	Dgcr8	ENSMUST00000202705	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18284563	3410
ENSMUSG00000106687	protein_coding	Dgcr8	ENSMUST00000200939	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18280246	2575
ENSMUSG00000106687	protein_coding	Dgcr8	ENSMUST00000231542	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18289231	767
ENSMUSG00000106687	protein_coding	Dgcr8	ENSMUST00000231325	processed_transcript		CHR_MG3833_MG4220_PATCH	-1	18289231	442
ENSMUSG00000106687	protein_coding	Dgcr8	ENSMUST00000201210	processed_transcript		CHR_MG3833_MG4220_PATCH	-1	18289170	98
ENSMUSG00000106761	miRNA	Mir290b	ENSMUST00000202035	miRNA		CHR_MG4151_PATCH	-1	3217369	58
ENSMUSG00000107547	lncRNA	Speer9-ps1	ENSMUST00000203548	lncRNA		CHR_MG4151_PATCH	1	3128146	775
ENSMUSG00000107717	unprocessed_pseudogene	Gm44473	ENSMUST00000203478	unprocessed_pseudogene		CHR_MG4151_PATCH	1	3046372	152
ENSMUSG00000107871	protein_coding	AU018091	ENSMUST00000204887	processed_transcript		CHR_MG4151_PATCH	-1	3164331	3361
ENSMUSG00000107871	protein_coding	AU018091	ENSMUST00000181669	protein_coding		CHR_MG4151_PATCH	-1	3169029	3449
ENSMUSG00000107871	protein_coding	AU018091	ENSMUST00000203587	protein_coding		CHR_MG4151_PATCH	-1	3168931	535
ENSMUSG00000107958	processed_pseudogene	Gm18198	ENSMUST00000204794	processed_pseudogene		CHR_MG4151_PATCH	1	3097437	1551
ENSMUSG00000107963	processed_pseudogene	Gm6727	ENSMUST00000203316	processed_pseudogene		CHR_MG4151_PATCH	-1	3103844	1518
ENSMUSG00000107974	processed_pseudogene	Gm44451	ENSMUST00000203446	processed_pseudogene		CHR_MG4151_PATCH	-1	3116478	483
ENSMUSG00000108159	processed_pseudogene	Gm7353	ENSMUST00000203591	processed_pseudogene		CHR_MG4151_PATCH	-1	3111963	2866
ENSMUSG00000108182	processed_pseudogene	Gm44459	ENSMUST00000203201	processed_pseudogene		CHR_MG4151_PATCH	-1	3120272	160
ENSMUSG00000108499	lncRNA	Gm38534	ENSMUST00000206738	lncRNA		CHR_MG3829_PATCH	1	88253368	1909
ENSMUSG00000108733	protein_coding	Zdhhc8	ENSMUST00000206884	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18235136	4868
ENSMUSG00000108733	protein_coding	Zdhhc8	ENSMUST00000232119	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18224682	652
ENSMUSG00000110797	protein_coding	Nek2	ENSMUST00000213394	protein_coding		CHR_MG3999_PATCH	1	191821444	3227
ENSMUSG00000110797	protein_coding	Nek2	ENSMUST00000216945	retained_intron		CHR_MG3999_PATCH	1	191821510	2044
ENSMUSG00000110797	protein_coding	Nek2	ENSMUST00000217216	retained_intron		CHR_MG3999_PATCH	1	191822182	767
ENSMUSG00000110797	protein_coding	Nek2	ENSMUST00000215890	processed_transcript		CHR_MG3999_PATCH	1	191827148	452
ENSMUSG00000110806	pseudogene	AC243907.1	ENSMUST00000214219	pseudogene		CHR_MG3835_PATCH	1	11381831	375
ENSMUSG00000110850	protein_coding	Slc30a1	ENSMUST00000215537	protein_coding		CHR_MG3999_PATCH	1	191906767	5244
ENSMUSG00000110850	protein_coding	Slc30a1	ENSMUST00000214588	protein_coding		CHR_MG3999_PATCH	1	191907256	677
ENSMUSG00000110852	lncRNA	Gm38037	ENSMUST00000213555	lncRNA		CHR_MG3999_PATCH	-1	191821993	1624
ENSMUSG00000110868	protein_coding	AA467197	ENSMUST00000213798	protein_coding		CHR_MG3836_PATCH	1	122648425	519
ENSMUSG00000110868	protein_coding	AA467197	ENSMUST00000213125	protein_coding		CHR_MG3836_PATCH	1	122649289	792
ENSMUSG00000110868	protein_coding	AA467197	ENSMUST00000216265	processed_transcript		CHR_MG3836_PATCH	1	122649354	523
ENSMUSG00000110868	protein_coding	AA467197	ENSMUST00000215634	protein_coding		CHR_MG3836_PATCH	1	122649354	751
ENSMUSG00000111113	protein_coding	Rtn4r	ENSMUST00000213627	protein_coding		CHR_MG3833_MG4220_PATCH	1	18127642	1938
ENSMUSG00000111125	miRNA	Mir6366	ENSMUST00000213765	miRNA		CHR_MG3833_MG4220_PATCH	-1	18165170	82
ENSMUSG00000111138	protein_coding	Gatm	ENSMUST00000215775	protein_coding		CHR_MG3836_PATCH	-1	122611303	2389
ENSMUSG00000111138	protein_coding	Gatm	ENSMUST00000214872	processed_transcript		CHR_MG3836_PATCH	-1	122598534	510
ENSMUSG00000111138	protein_coding	Gatm	ENSMUST00000214402	retained_intron		CHR_MG3836_PATCH	-1	122598812	797
ENSMUSG00000111214	protein_coding	Slc30a4	ENSMUST00000216932	protein_coding		CHR_MG3836_PATCH	-1	122714078	5458
ENSMUSG00000111214	protein_coding	Slc30a4	ENSMUST00000214380	protein_coding		CHR_MG3836_PATCH	-1	122714102	3170
ENSMUSG00000111226	lncRNA	Gm49580	ENSMUST00000214518	lncRNA		CHR_MG3833_MG4220_PATCH	1	18028664	1369
ENSMUSG00000111226	lncRNA	Gm49580	ENSMUST00000230099	lncRNA		CHR_MG3833_MG4220_PATCH	1	18028679	1375
ENSMUSG00000111237	lncRNA	1700034H15Rik	ENSMUST00000216640	lncRNA		CHR_MG3999_PATCH	-1	191900886	250
ENSMUSG00000111237	lncRNA	1700034H15Rik	ENSMUST00000216903	lncRNA		CHR_MG3999_PATCH	-1	191899129	926
ENSMUSG00000111237	lncRNA	1700034H15Rik	ENSMUST00000216869	lncRNA		CHR_MG3999_PATCH	-1	191899256	728
ENSMUSG00000111237	lncRNA	1700034H15Rik	ENSMUST00000216355	lncRNA		CHR_MG3999_PATCH	-1	191901721	622
ENSMUSG00000111237	lncRNA	1700034H15Rik	ENSMUST00000214115	lncRNA		CHR_MG3999_PATCH	-1	191907519	4354
ENSMUSG00000111237	lncRNA	1700034H15Rik	ENSMUST00000215384	lncRNA		CHR_MG3999_PATCH	-1	191907527	1461
ENSMUSG00000111247	processed_pseudogene	Gm32460	ENSMUST00000217120	processed_pseudogene		CHR_MG3999_PATCH	1	191992710	232
ENSMUSG00000111321	protein_coding	Prodh	ENSMUST00000217439	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18089163	677
ENSMUSG00000111321	protein_coding	Prodh	ENSMUST00000216479	processed_transcript		CHR_MG3833_MG4220_PATCH	-1	18082319	2043
ENSMUSG00000111321	protein_coding	Prodh	ENSMUST00000216391	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18089292	2386
ENSMUSG00000111321	protein_coding	Prodh	ENSMUST00000214498	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18090203	2041
ENSMUSG00000111321	protein_coding	Prodh	ENSMUST00000215115	nonsense_mediated_decay		CHR_MG3833_MG4220_PATCH	-1	18079268	863
ENSMUSG00000111321	protein_coding	Prodh	ENSMUST00000215314	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18079942	732
ENSMUSG00000111321	protein_coding	Prodh	ENSMUST00000231583	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18079222	473
ENSMUSG00000111321	protein_coding	Prodh	ENSMUST00000231930	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18080248	714
ENSMUSG00000111321	protein_coding	Prodh	ENSMUST00000232623	retained_intron		CHR_MG3833_MG4220_PATCH	-1	18089143	4943
ENSMUSG00000111321	protein_coding	Prodh	ENSMUST00000216846	protein_coding		CHR_MG3833_MG4220_PATCH	-1	18089022	687
ENSMUSG00000111372	protein_coding	Ccdc188	ENSMUST00000232330	protein_coding		CHR_MG3833_MG4220_PATCH	1	18217879	1330
ENSMUSG00000111372	protein_coding	Ccdc188	ENSMUST00000231374	protein_coding		CHR_MG3833_MG4220_PATCH	1	18217879	1588
ENSMUSG00000111372	protein_coding	Ccdc188	ENSMUST00000231954	nonsense_mediated_decay		CHR_MG3833_MG4220_PATCH	1	18217879	1517
ENSMUSG00000111372	protein_coding	Ccdc188	ENSMUST00000217337	protein_coding		CHR_MG3833_MG4220_PATCH	1	18218170	747
ENSMUSG00000111385	protein_coding	Traf5	ENSMUST00000216022	retained_intron		CHR_MG3999_PATCH	-1	191998467	1414
ENSMUSG00000111385	protein_coding	Traf5	ENSMUST00000215301	protein_coding		CHR_MG3999_PATCH	-1	191999819	976
ENSMUSG00000111385	protein_coding	Traf5	ENSMUST00000213867	protein_coding		CHR_MG3999_PATCH	-1	192044862	1964
ENSMUSG00000111385	protein_coding	Traf5	ENSMUST00000214473	protein_coding		CHR_MG3999_PATCH	-1	192011465	414
ENSMUSG00000111385	protein_coding	Traf5	ENSMUST00000215130	retained_intron		CHR_MG3999_PATCH	-1	192011465	2084
ENSMUSG00000111392	lncRNA	4930417H01Rik	ENSMUST00000213433	lncRNA		CHR_MG3836_PATCH	1	122719482	1233
ENSMUSG00000111392	lncRNA	4930417H01Rik	ENSMUST00000217383	lncRNA		CHR_MG3836_PATCH	1	122714344	673
ENSMUSG00000111392	lncRNA	4930417H01Rik	ENSMUST00000216163	lncRNA		CHR_MG3836_PATCH	1	122714346	589
ENSMUSG00000111392	lncRNA	4930417H01Rik	ENSMUST00000216040	lncRNA		CHR_MG3836_PATCH	1	122713486	543
ENSMUSG00000111392	lncRNA	4930417H01Rik	ENSMUST00000214619	lncRNA		CHR_MG3836_PATCH	1	122715673	424
ENSMUSG00000111392	lncRNA	4930417H01Rik	ENSMUST00000213440	lncRNA		CHR_MG3836_PATCH	1	122715675	349
ENSMUSG00000111407	lncRNA	Gm26670	ENSMUST00000227416	lncRNA		CHR_MG3999_PATCH	-1	191989987	340
ENSMUSG00000111407	lncRNA	Gm26670	ENSMUST00000215969	lncRNA		CHR_MG3999_PATCH	-1	191989971	3287
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000213864	protein_coding		CHR_MG3999_PATCH	-1	192090313	3791
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000217048	protein_coding		CHR_MG3999_PATCH	-1	192090343	3748
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000216263	nonsense_mediated_decay		CHR_MG3999_PATCH	-1	192090334	3643
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000217633	nonsense_mediated_decay		CHR_MG3999_PATCH	-1	192068649	892
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000216381	protein_coding		CHR_MG3999_PATCH	-1	192090365	1844
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000215519	protein_coding		CHR_MG3999_PATCH	-1	192076588	842
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000215183	protein_coding		CHR_MG3999_PATCH	-1	192090329	1623
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000217322	protein_coding		CHR_MG3999_PATCH	-1	192090230	1578
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000217528	retained_intron		CHR_MG3999_PATCH	-1	192061154	2666
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000214025	retained_intron		CHR_MG3999_PATCH	-1	192083560	3412
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000217133	protein_coding		CHR_MG3999_PATCH	-1	192089963	345
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000217276	retained_intron		CHR_MG3999_PATCH	-1	192090338	3589
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000213845	processed_transcript		CHR_MG3999_PATCH	-1	192090313	629
ENSMUSG00000111452	protein_coding	Rcor3	ENSMUST00000216032	processed_transcript		CHR_MG3999_PATCH	-1	192090327	479
ENSMUSG00000111559	protein_coding	AEKR01077154.1	ENSMUST00000214778	protein_coding		CHR_MG3836_PATCH	1	122630686	1284
ENSMUSG00000111559	protein_coding	AEKR01077154.1	ENSMUST00000230176	protein_coding		CHR_MG3836_PATCH	1	122630686	1284
ENSMUSG00000111586	miRNA	Mir3473c	ENSMUST00000213207	miRNA		CHR_MG3999_PATCH	-1	191998483	81
ENSMUSG00000111644	lncRNA	Gm26879	ENSMUST00000213148	lncRNA		CHR_MG3999_PATCH	1	192044658	1176
ENSMUSG00000111647	protein_coding	Dgcr6	ENSMUST00000217406	protein_coding		CHR_MG3833_MG4220_PATCH	1	18052860	1280
ENSMUSG00000111647	protein_coding	Dgcr6	ENSMUST00000213277	processed_transcript		CHR_MG3833_MG4220_PATCH	1	18052876	919
ENSMUSG00000111647	protein_coding	Dgcr6	ENSMUST00000215807	processed_transcript		CHR_MG3833_MG4220_PATCH	1	18052892	926
ENSMUSG00000111647	protein_coding	Dgcr6	ENSMUST00000214312	protein_coding		CHR_MG3833_MG4220_PATCH	1	18065159	894
ENSMUSG00000111647	protein_coding	Dgcr6	ENSMUST00000214341	protein_coding		CHR_MG3833_MG4220_PATCH	1	18066403	1086
ENSMUSG00000111647	protein_coding	Dgcr6	ENSMUST00000215178	protein_coding		CHR_MG3833_MG4220_PATCH	1	18066443	1050
ENSMUSG00000111647	protein_coding	Dgcr6	ENSMUST00000215905	protein_coding		CHR_MG3833_MG4220_PATCH	1	18066448	1415
ENSMUSG00000111647	protein_coding	Dgcr6	ENSMUST00000217291	protein_coding		CHR_MG3833_MG4220_PATCH	1	18069480	641
ENSMUSG00000111705	processed_pseudogene	Gstp-ps	ENSMUST00000216994	processed_pseudogene		CHR_MG3999_PATCH	-1	192026753	631
ENSMUSG00000111723	protein_coding	Rd3	ENSMUST00000217431	protein_coding		CHR_MG3999_PATCH	1	191977219	3724
ENSMUSG00000111723	protein_coding	Rd3	ENSMUST00000213661	protein_coding		CHR_MG3999_PATCH	1	191977222	1760
ENSMUSG00000111723	protein_coding	Rd3	ENSMUST00000215080	protein_coding		CHR_MG3999_PATCH	1	191978100	1969
ENSMUSG00000111723	protein_coding	Rd3	ENSMUST00000215559	retained_intron		CHR_MG3999_PATCH	1	191984019	2223
ENSMUSG00000111779	pseudogene	AL611930.1	ENSMUST00000214674	pseudogene		CHR_MG4136_PATCH	-1	143506462	408
ENSMUSG00000111838	miRNA	Mir147	ENSMUST00000215825	miRNA		CHR_MG3836_PATCH	1	122652242	79
ENSMUSG00000115859	lncRNA	4930534D22Rik	ENSMUST00000230605	lncRNA		CHR_MG3714_PATCH	1	131302643	2715
ENSMUSG00000115876	processed_pseudogene	Gm46209	ENSMUST00000229054	processed_pseudogene		CHR_MG4138_PATCH	1	7458356	553
ENSMUSG00000115889	lncRNA	Gm20470	ENSMUST00000231134	lncRNA		CHR_MG4138_PATCH	-1	7686863	331
ENSMUSG00000115895	processed_pseudogene	Gm16254	ENSMUST00000230297	processed_pseudogene		CHR_MG4138_PATCH	-1	7532577	730
ENSMUSG00000115937	protein_coding	Katna1	ENSMUST00000229883	protein_coding		CHR_MG4138_PATCH	1	7651764	1774
ENSMUSG00000115937	protein_coding	Katna1	ENSMUST00000230195	protein_coding		CHR_MG4138_PATCH	1	7651764	1775
ENSMUSG00000115937	protein_coding	Katna1	ENSMUST00000229666	nonsense_mediated_decay		CHR_MG4138_PATCH	1	7651772	683
ENSMUSG00000115937	protein_coding	Katna1	ENSMUST00000229560	retained_intron		CHR_MG4138_PATCH	1	7674639	825
ENSMUSG00000115937	protein_coding	Katna1	ENSMUST00000229515	protein_coding		CHR_MG4138_PATCH	1	7685536	462
ENSMUSG00000115937	protein_coding	Katna1	ENSMUST00000229914	protein_coding		CHR_MG4138_PATCH	1	7686997	488
ENSMUSG00000115949	processed_pseudogene	Gm48121	ENSMUST00000230204	processed_pseudogene		CHR_MG4138_PATCH	1	7503459	271
ENSMUSG00000115960	protein_coding	Ulbp1	ENSMUST00000230057	protein_coding		CHR_MG4138_PATCH	-1	7473361	5959
ENSMUSG00000115960	protein_coding	Ulbp1	ENSMUST00000230301	protein_coding		CHR_MG4138_PATCH	-1	7473638	3815
ENSMUSG00000115960	protein_coding	Ulbp1	ENSMUST00000230423	protein_coding		CHR_MG4138_PATCH	-1	7473341	1093
ENSMUSG00000115960	protein_coding	Ulbp1	ENSMUST00000229736	processed_transcript		CHR_MG4138_PATCH	-1	7473587	1200
ENSMUSG00000115960	protein_coding	Ulbp1	ENSMUST00000229489	processed_transcript		CHR_MG4138_PATCH	-1	7473587	383
ENSMUSG00000115999	protein_coding	Ginm1	ENSMUST00000229673	protein_coding		CHR_MG4138_PATCH	-1	7706681	1557
ENSMUSG00000115999	protein_coding	Ginm1	ENSMUST00000229867	retained_intron		CHR_MG4138_PATCH	-1	7696315	831
ENSMUSG00000115999	protein_coding	Ginm1	ENSMUST00000230855	protein_coding		CHR_MG4138_PATCH	-1	7706655	1525
ENSMUSG00000115999	protein_coding	Ginm1	ENSMUST00000229047	processed_transcript		CHR_MG4138_PATCH	-1	7718564	353
ENSMUSG00000115999	protein_coding	Ginm1	ENSMUST00000229499	processed_transcript		CHR_MG4138_PATCH	-1	7718588	1405
ENSMUSG00000115999	protein_coding	Ginm1	ENSMUST00000230289	protein_coding		CHR_MG4138_PATCH	-1	7718586	300
ENSMUSG00000116015	protein_coding	AC147512.1	ENSMUST00000230122	protein_coding		CHR_MG4138_PATCH	-1	7490653	327
ENSMUSG00000116015	protein_coding	AC147512.1	ENSMUST00000229421	protein_coding		CHR_MG4138_PATCH	-1	7490653	327
ENSMUSG00000116036	processed_pseudogene	Gm43116	ENSMUST00000229083	processed_pseudogene		CHR_MG3714_PATCH	1	131360556	195
ENSMUSG00000116037	protein_coding	Nup43	ENSMUST00000229979	protein_coding		CHR_MG4138_PATCH	1	7593267	1286
ENSMUSG00000116037	protein_coding	Nup43	ENSMUST00000230456	retained_intron		CHR_MG4138_PATCH	1	7593278	458
ENSMUSG00000116037	protein_coding	Nup43	ENSMUST00000229643	retained_intron		CHR_MG4138_PATCH	1	7593304	1735
ENSMUSG00000116037	protein_coding	Nup43	ENSMUST00000229374	retained_intron		CHR_MG4138_PATCH	1	7596519	750
ENSMUSG00000116063	protein_coding	Cyp2u1	ENSMUST00000229773	protein_coding		CHR_MG3714_PATCH	-1	131303224	4378
ENSMUSG00000116063	protein_coding	Cyp2u1	ENSMUST00000230003	protein_coding		CHR_MG3714_PATCH	-1	131303200	1716
ENSMUSG00000116063	protein_coding	Cyp2u1	ENSMUST00000230984	processed_transcript		CHR_MG3714_PATCH	-1	131303227	1873
ENSMUSG00000116115	processed_pseudogene	Gm21321	ENSMUST00000230945	processed_pseudogene		CHR_MG4138_PATCH	-1	7390783	446
ENSMUSG00000116143	protein_coding	Sgms2	ENSMUST00000230673	protein_coding		CHR_MG3714_PATCH	-1	131344933	5801
ENSMUSG00000116143	protein_coding	Sgms2	ENSMUST00000229986	protein_coding		CHR_MG3714_PATCH	-1	131344940	767
ENSMUSG00000116143	protein_coding	Sgms2	ENSMUST00000230591	protein_coding		CHR_MG3714_PATCH	-1	131402591	364
ENSMUSG00000116143	protein_coding	Sgms2	ENSMUST00000231151	processed_transcript		CHR_MG3714_PATCH	-1	131403523	509
ENSMUSG00000116277	pseudogene	AC147512.2	ENSMUST00000229707	pseudogene		CHR_MG4138_PATCH	-1	7450078	294
ENSMUSG00000116377	protein_coding	Lrp11	ENSMUST00000230391	protein_coding		CHR_MG4138_PATCH	1	7515564	1492
ENSMUSG00000116377	protein_coding	Lrp11	ENSMUST00000229554	protein_coding		CHR_MG4138_PATCH	1	7515581	3386
ENSMUSG00000116377	protein_coding	Lrp11	ENSMUST00000228989	protein_coding		CHR_MG4138_PATCH	1	7515743	3220
ENSMUSG00000116377	protein_coding	Lrp11	ENSMUST00000229595	protein_coding		CHR_MG4138_PATCH	1	7515891	976
ENSMUSG00000116377	protein_coding	Lrp11	ENSMUST00000230061	protein_coding		CHR_MG4138_PATCH	1	7521948	652
ENSMUSG00000116405	protein_coding	Pcmt1	ENSMUST00000229667	nonsense_mediated_decay		CHR_MG4138_PATCH	-1	7589028	2607
ENSMUSG00000116405	protein_coding	Pcmt1	ENSMUST00000229931	protein_coding		CHR_MG4138_PATCH	-1	7589372	2757
ENSMUSG00000116405	protein_coding	Pcmt1	ENSMUST00000231120	protein_coding		CHR_MG4138_PATCH	-1	7589067	2491
ENSMUSG00000116405	protein_coding	Pcmt1	ENSMUST00000230592	protein_coding		CHR_MG4138_PATCH	-1	7574919	1073
ENSMUSG00000116405	protein_coding	Pcmt1	ENSMUST00000230258	protein_coding		CHR_MG4138_PATCH	-1	7589025	1132
ENSMUSG00000116405	protein_coding	Pcmt1	ENSMUST00000229225	retained_intron		CHR_MG4138_PATCH	-1	7589372	1369
ENSMUSG00000116405	protein_coding	Pcmt1	ENSMUST00000229892	protein_coding		CHR_MG4138_PATCH	-1	7606900	465
ENSMUSG00000116405	protein_coding	Pcmt1	ENSMUST00000230455	processed_transcript		CHR_MG4138_PATCH	-1	7577300	514
ENSMUSG00000116405	protein_coding	Pcmt1	ENSMUST00000230965	protein_coding		CHR_MG4138_PATCH	-1	7606894	756
ENSMUSG00000116405	protein_coding	Pcmt1	ENSMUST00000229405	retained_intron		CHR_MG4138_PATCH	-1	7589028	381
ENSMUSG00000116422	protein_coding	Lats1	ENSMUST00000229932	protein_coding		CHR_MG4138_PATCH	1	7606978	7209
ENSMUSG00000116422	protein_coding	Lats1	ENSMUST00000230889	protein_coding		CHR_MG4138_PATCH	1	7617011	4186
ENSMUSG00000116422	protein_coding	Lats1	ENSMUST00000229089	protein_coding		CHR_MG4138_PATCH	1	7617011	4155
ENSMUSG00000116456	TEC	Gm37548	ENSMUST00000230897	TEC		CHR_MG3712_PATCH	-1	50840031	3814
ENSMUSG00000116602	protein_coding	Gm49776	ENSMUST00000231363	nonsense_mediated_decay		CHR_MG3833_MG4220_PATCH	-1	18258321	608
ENSMUSG00000116683	lncRNA	4933432I09Rik	ENSMUST00000231654	lncRNA		CHR_MG3833_MG4220_PATCH	-1	18213533	3257
ENSMUSG00000116683	lncRNA	4933432I09Rik	ENSMUST00000232405	lncRNA		CHR_MG3833_MG4220_PATCH	-1	18213863	1362
ENSMUSG00000116856	lncRNA	4930483P17Rik	ENSMUST00000232430	lncRNA		CHR_MG3833_MG4220_PATCH	1	18213649	961
ENSMUSG00000116869	TEC	Gm49588	ENSMUST00000231596	TEC		CHR_MG3833_MG4220_PATCH	1	18482942	4490
ENSMUSG00000118446	processed_pseudogene	Gm29708	ENSMUST00000238380	processed_pseudogene		CHR_MG4151_PATCH	1	3149831	946
ENSMUSG00000096925	miRNA	Mir291a	ENSMUST00000180747	miRNA		CHR_MG4151_PATCH	1	3217593	82
ENSMUSG00000096998	protein_coding	Cacng7	ENSMUST00000181686	protein_coding		CHR_MG4151_PATCH	1	3331471	2212
ENSMUSG00000096998	protein_coding	Cacng7	ENSMUST00000204993	retained_intron		CHR_MG4151_PATCH	1	3336732	812
ENSMUSG00000097034	miRNA	Mir294	ENSMUST00000181135	miRNA		CHR_MG4151_PATCH	1	3219315	84
ENSMUSG00000097400	miRNA	Mir295	ENSMUST00000181471	miRNA		CHR_MG4151_PATCH	1	3219447	69
ENSMUSG00000097449	protein_coding	Prkcg	ENSMUST00000181455	protein_coding		CHR_MG4151_PATCH	1	3302030	3131
ENSMUSG00000097449	protein_coding	Prkcg	ENSMUST00000230345	protein_coding		CHR_MG4151_PATCH	1	3302030	3131
ENSMUSG00000097449	protein_coding	Prkcg	ENSMUST00000181221	protein_coding		CHR_MG4151_PATCH	1	3302048	2960
ENSMUSG00000097449	protein_coding	Prkcg	ENSMUST00000229834	protein_coding		CHR_MG4151_PATCH	1	3302048	2960
ENSMUSG00000097499	miRNA	Gm23450	ENSMUST00000181785	miRNA		CHR_MG4151_PATCH	1	3413582	91
ENSMUSG00000097568	miRNA	Mir291b	ENSMUST00000180985	miRNA		CHR_MG4151_PATCH	1	3218156	79
ENSMUSG00000097688	miRNA	Mir293	ENSMUST00000181340	miRNA		CHR_MG4151_PATCH	1	3219017	80
ENSMUSG00000097782	miRNA	Mir292	ENSMUST00000181789	miRNA		CHR_MG4151_PATCH	1	3217863	82
ENSMUSG00000097829	protein_coding	Myadm	ENSMUST00000180998	protein_coding		CHR_MG4151_PATCH	1	3295240	960
ENSMUSG00000097829	protein_coding	Myadm	ENSMUST00000230914	protein_coding		CHR_MG4151_PATCH	1	3295240	960
ENSMUSG00000097894	protein_coding	Cacng6	ENSMUST00000182493	protein_coding		CHR_MG4151_PATCH	1	3422711	1977
ENSMUSG00000097894	protein_coding	Cacng6	ENSMUST00000180916	protein_coding		CHR_MG4151_PATCH	1	3423178	868
ENSMUSG00000098250	snoRNA	Gm24895	ENSMUST00000183753	snoRNA		CHR_MG4180_PATCH	1	109646637	74
ENSMUSG00000098277	snoRNA	Gm22205	ENSMUST00000184352	snoRNA		CHR_MG4180_PATCH	1	109688563	71
ENSMUSG00000098321	miRNA	Mir431	ENSMUST00000184116	miRNA		CHR_MG4180_PATCH	1	109590955	91
ENSMUSG00000098324	miRNA	Mir673	ENSMUST00000184307	miRNA		CHR_MG4180_PATCH	1	109572498	91
ENSMUSG00000098337	snoRNA	Gm23736	ENSMUST00000183585	snoRNA		CHR_MG4180_PATCH	1	109681308	75
ENSMUSG00000098352	snoRNA	Gm24564	ENSMUST00000183909	snoRNA		CHR_MG4180_PATCH	1	109631582	75
ENSMUSG00000098372	snoRNA	DQ267102	ENSMUST00000184345	snoRNA		CHR_MG4180_PATCH	1	109656853	72
ENSMUSG00000098398	snoRNA	Gm23474	ENSMUST00000184393	snoRNA		CHR_MG4180_PATCH	1	109634276	75
ENSMUSG00000098411	protein_coding	Dlk1	ENSMUST00000184768	retained_intron		CHR_MG4180_PATCH	1	109452823	668
ENSMUSG00000098411	protein_coding	Dlk1	ENSMUST00000183367	protein_coding		CHR_MG4180_PATCH	1	109452849	4653
ENSMUSG00000098411	protein_coding	Dlk1	ENSMUST00000183925	protein_coding		CHR_MG4180_PATCH	1	109453455	1703
ENSMUSG00000098411	protein_coding	Dlk1	ENSMUST00000184240	protein_coding		CHR_MG4180_PATCH	1	109453491	1129
ENSMUSG00000098411	protein_coding	Dlk1	ENSMUST00000183988	protein_coding		CHR_MG4180_PATCH	1	109453491	1300
ENSMUSG00000098411	protein_coding	Dlk1	ENSMUST00000183383	protein_coding		CHR_MG4180_PATCH	1	109453535	4106
ENSMUSG00000098411	protein_coding	Dlk1	ENSMUST00000184132	protein_coding		CHR_MG4180_PATCH	1	109453655	3914
ENSMUSG00000098411	protein_coding	Dlk1	ENSMUST00000184736	protein_coding		CHR_MG4180_PATCH	1	109453660	879
ENSMUSG00000098411	protein_coding	Dlk1	ENSMUST00000183373	protein_coding		CHR_MG4180_PATCH	1	109454195	1283
ENSMUSG00000098411	protein_coding	Dlk1	ENSMUST00000184683	protein_coding		CHR_MG4180_PATCH	1	109459843	483
ENSMUSG00000098517	snoRNA	Gm25224	ENSMUST00000184946	snoRNA		CHR_MG4180_PATCH	1	109689985	68
ENSMUSG00000098523	snoRNA	AF357428	ENSMUST00000183391	snoRNA		CHR_MG4180_PATCH	1	109680453	69
ENSMUSG00000098545	miRNA	Mir1188	ENSMUST00000184475	miRNA		CHR_MG4180_PATCH	1	109612330	120
ENSMUSG00000098556	snoRNA	AF357341	ENSMUST00000184368	snoRNA		CHR_MG4180_PATCH	1	109682027	75
ENSMUSG00000098576	miRNA	Mir433	ENSMUST00000183961	miRNA		CHR_MG4180_PATCH	1	109592223	124
ENSMUSG00000098581	snoRNA	Gm23508	ENSMUST00000184376	snoRNA		CHR_MG4180_PATCH	1	109653541	72
ENSMUSG00000098610	miRNA	Mir370	ENSMUST00000183521	miRNA		CHR_MG4180_PATCH	1	109618766	79
ENSMUSG00000098616	snoRNA	Gm23787	ENSMUST00000183981	snoRNA		CHR_MG4180_PATCH	1	109685470	73
ENSMUSG00000098637	snoRNA	Gm23347	ENSMUST00000184447	snoRNA		CHR_MG4180_PATCH	1	109674421	82
ENSMUSG00000098639	protein_coding	Rtl1	ENSMUST00000184423	protein_coding		CHR_MG4180_PATCH	-1	109600838	6358
ENSMUSG00000098673	snoRNA	Gm25357	ENSMUST00000183854	snoRNA		CHR_MG4180_PATCH	1	109657633	72
ENSMUSG00000098738	miRNA	Mir882	ENSMUST00000183466	miRNA		CHR_MG4180_PATCH	1	109682705	77
ENSMUSG00000098806	miRNA	Mir540	ENSMUST00000185161	miRNA		CHR_MG4180_PATCH	1	109586588	67
ENSMUSG00000098902	snoRNA	Gm24899	ENSMUST00000184341	snoRNA		CHR_MG4180_PATCH	1	109641530	73
ENSMUSG00000098913	miRNA	Mir3071	ENSMUST00000184309	miRNA		CHR_MG4180_PATCH	-1	109595905	80
ENSMUSG00000098971	snoRNA	Gm26922	ENSMUST00000183667	snoRNA		CHR_MG4180_PATCH	1	109655135	72
ENSMUSG00000099026	snoRNA	Gm27604	ENSMUST00000183697	snoRNA		CHR_MG4180_PATCH	1	109658915	72
ENSMUSG00000099029	snoRNA	Gm25854	ENSMUST00000183810	snoRNA		CHR_MG4180_PATCH	1	109687306	72
ENSMUSG00000099038	snoRNA	Gm25856	ENSMUST00000184057	snoRNA		CHR_MG4180_PATCH	1	109683502	75
ENSMUSG00000099044	miRNA	Mir127	ENSMUST00000184610	miRNA		CHR_MG4180_PATCH	1	109593354	70
ENSMUSG00000099046	snoRNA	DQ267101	ENSMUST00000184018	snoRNA		CHR_MG4180_PATCH	1	109651932	73
ENSMUSG00000099048	miRNA	Mir665	ENSMUST00000184551	miRNA		CHR_MG4180_PATCH	1	109586822	94
ENSMUSG00000099067	miRNA	Gm23912	ENSMUST00000184857	miRNA		CHR_MG4180_PATCH	1	109618622	87
ENSMUSG00000099084	snoRNA	AF357425	ENSMUST00000185010	snoRNA		CHR_MG4180_PATCH	1	109636520	73
ENSMUSG00000099090	miRNA	Mir341	ENSMUST00000184344	miRNA		CHR_MG4180_PATCH	1	109612008	96
ENSMUSG00000099171	miRNA	Mir434	ENSMUST00000183896	miRNA		CHR_MG4180_PATCH	1	109595014	94
ENSMUSG00000099194	miRNA	Mir337	ENSMUST00000184047	miRNA		CHR_MG4180_PATCH	1	109586297	97
ENSMUSG00000099195	misc_RNA	Gm27350	ENSMUST00000183832	misc_RNA		CHR_MG4180_PATCH	1	109604390	98
ENSMUSG00000099231	miRNA	Mir432	ENSMUST00000184800	miRNA		CHR_MG4180_PATCH	1	109595464	75
ENSMUSG00000099271	snoRNA	Gm22981	ENSMUST00000184468	snoRNA		CHR_MG4180_PATCH	1	109682892	75
ENSMUSG00000099288	snoRNA	Gm23600	ENSMUST00000183793	snoRNA		CHR_MG4180_PATCH	1	109644256	71
ENSMUSG00000099306	snoRNA	DQ267100	ENSMUST00000184930	snoRNA		CHR_MG4180_PATCH	1	109650125	72
ENSMUSG00000099327	miRNA	Mir493	ENSMUST00000184304	miRNA		CHR_MG4180_PATCH	1	109580741	83
ENSMUSG00000102477	misc_RNA	Gm27300	ENSMUST00000195127	misc_RNA		CHR_MG4180_PATCH	1	109544296	97
ENSMUSG00000102954	miRNA	Mir3070a	ENSMUST00000184927	miRNA		CHR_MG4180_PATCH	1	109588451	89
ENSMUSG00000103418	misc_RNA	Gm27528	ENSMUST00000195550	misc_RNA		CHR_MG4180_PATCH	1	109532441	205
ENSMUSG00000103721	miRNA	Mir3070b	ENSMUST00000185064	miRNA		CHR_MG4180_PATCH	1	109589100	89
ENSMUSG00000104151	misc_RNA	Gm27596	ENSMUST00000194943	misc_RNA		CHR_MG4180_PATCH	1	109541125	83
ENSMUSG00000104193	miRNA	Mir1906-1	ENSMUST00000195601	miRNA		CHR_MG4180_PATCH	1	109544498	80
ENSMUSG00000104387	miRNA	Mir770	ENSMUST00000192104	miRNA		CHR_MG4180_PATCH	1	109564200	94
ENSMUSG00000106728	protein_coding	Cacng8	ENSMUST00000201660	protein_coding		CHR_MG4151_PATCH	1	3389199	1897
ENSMUSG00000106728	protein_coding	Cacng8	ENSMUST00000202650	protein_coding		CHR_MG4151_PATCH	1	3392633	1380
ENSMUSG00000106728	protein_coding	Cacng8	ENSMUST00000203061	protein_coding		CHR_MG4151_PATCH	1	3392934	535
ENSMUSG00000106921	miRNA	Mir292b	ENSMUST00000202483	miRNA		CHR_MG4151_PATCH	-1	3217933	62
ENSMUSG00000106942	TEC	Gm37899	ENSMUST00000201725	TEC		CHR_MG4180_PATCH	1	109669377	8717
ENSMUSG00000107170	miRNA	Mir136	ENSMUST00000202449	miRNA		CHR_MG4180_PATCH	1	109595835	62
ENSMUSG00000107221	miRNA	Mir3544	ENSMUST00000201778	miRNA		CHR_MG4180_PATCH	-1	109586381	61
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238629	lncRNA		CHR_MG4180_PATCH	1	109604316	1602
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238659	lncRNA		CHR_MG4180_PATCH	1	109604327	1704
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238477	lncRNA		CHR_MG4180_PATCH	1	109604333	1674
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000200987	lncRNA		CHR_MG4180_PATCH	1	109604444	859
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000200760	lncRNA		CHR_MG4180_PATCH	1	109604453	880
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238251	lncRNA		CHR_MG4180_PATCH	1	109604475	1220
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238224	lncRNA		CHR_MG4180_PATCH	1	109604483	3223
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238424	lncRNA		CHR_MG4180_PATCH	1	109604536	1383
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238264	lncRNA		CHR_MG4180_PATCH	1	109604545	1608
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000201540	lncRNA		CHR_MG4180_PATCH	1	109604554	295
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238586	lncRNA		CHR_MG4180_PATCH	1	109605526	1767
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238502	lncRNA		CHR_MG4180_PATCH	1	109606773	1505
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238445	lncRNA		CHR_MG4180_PATCH	1	109607972	1656
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238572	lncRNA		CHR_MG4180_PATCH	1	109610024	1449
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238489	lncRNA		CHR_MG4180_PATCH	1	109613734	1390
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238214	lncRNA		CHR_MG4180_PATCH	1	109616569	1755
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238259	lncRNA		CHR_MG4180_PATCH	1	109617302	1937
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238463	lncRNA		CHR_MG4180_PATCH	1	109617383	2228
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202493	lncRNA		CHR_MG4180_PATCH	1	109617685	1274
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238254	lncRNA		CHR_MG4180_PATCH	1	109617773	1525
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238527	lncRNA		CHR_MG4180_PATCH	1	109618419	1468
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238433	lncRNA		CHR_MG4180_PATCH	1	109618419	1929
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000200847	lncRNA		CHR_MG4180_PATCH	1	109619845	1332
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202140	lncRNA		CHR_MG4180_PATCH	1	109620883	1392
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000201112	lncRNA		CHR_MG4180_PATCH	1	109625643	633
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238227	lncRNA		CHR_MG4180_PATCH	1	109627657	1275
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202961	lncRNA		CHR_MG4180_PATCH	1	109632849	5099
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238399	lncRNA		CHR_MG4180_PATCH	1	109633699	1943
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238667	lncRNA		CHR_MG4180_PATCH	1	109633699	3029
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202330	lncRNA		CHR_MG4180_PATCH	1	109634445	1414
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202344	lncRNA		CHR_MG4180_PATCH	1	109634483	2711
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238381	lncRNA		CHR_MG4180_PATCH	1	109634652	2372
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238713	lncRNA		CHR_MG4180_PATCH	1	109637348	1686
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238235	lncRNA		CHR_MG4180_PATCH	1	109638128	1912
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238323	lncRNA		CHR_MG4180_PATCH	1	109639789	1886
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238312	lncRNA		CHR_MG4180_PATCH	1	109642687	1290
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000203001	lncRNA		CHR_MG4180_PATCH	1	109643135	1815
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238475	lncRNA		CHR_MG4180_PATCH	1	109643339	2364
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238627	lncRNA		CHR_MG4180_PATCH	1	109643847	1625
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000200746	lncRNA		CHR_MG4180_PATCH	1	109644450	1501
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238330	lncRNA		CHR_MG4180_PATCH	1	109644912	1342
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238642	lncRNA		CHR_MG4180_PATCH	1	109645384	2746
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238589	lncRNA		CHR_MG4180_PATCH	1	109645443	1832
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238542	lncRNA		CHR_MG4180_PATCH	1	109645967	3430
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238750	lncRNA		CHR_MG4180_PATCH	1	109646423	1236
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238481	lncRNA		CHR_MG4180_PATCH	1	109646638	1077
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238590	lncRNA		CHR_MG4180_PATCH	1	109646638	1196
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238351	lncRNA		CHR_MG4180_PATCH	1	109646638	1160
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202940	lncRNA		CHR_MG4180_PATCH	1	109646638	1627
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238358	lncRNA		CHR_MG4180_PATCH	1	109646638	1685
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238605	lncRNA		CHR_MG4180_PATCH	1	109646638	1957
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000201163	lncRNA		CHR_MG4180_PATCH	1	109646638	2368
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202303	lncRNA		CHR_MG4180_PATCH	1	109646670	8080
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000223512	lncRNA		CHR_MG4180_PATCH	1	109650113	2624
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202153	lncRNA		CHR_MG4180_PATCH	1	109650580	593
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238298	lncRNA		CHR_MG4180_PATCH	1	109650747	2352
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202172	lncRNA		CHR_MG4180_PATCH	1	109651171	1218
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000201795	lncRNA		CHR_MG4180_PATCH	1	109651176	1474
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238739	lncRNA		CHR_MG4180_PATCH	1	109651176	1651
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238498	lncRNA		CHR_MG4180_PATCH	1	109651176	1689
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238579	lncRNA		CHR_MG4180_PATCH	1	109651176	1929
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202717	lncRNA		CHR_MG4180_PATCH	1	109651297	1480
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238225	lncRNA		CHR_MG4180_PATCH	1	109651848	1070
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238644	lncRNA		CHR_MG4180_PATCH	1	109653986	2769
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238393	lncRNA		CHR_MG4180_PATCH	1	109654833	1061
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238495	lncRNA		CHR_MG4180_PATCH	1	109656358	761
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238580	lncRNA		CHR_MG4180_PATCH	1	109656748	1267
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000202088	retained_intron		CHR_MG4180_PATCH	1	109657796	1843
ENSMUSG00000107391	lncRNA	Rian	ENSMUST00000238771	lncRNA		CHR_MG4180_PATCH	1	109659340	1498
ENSMUSG00000107437	processed_pseudogene	Gm5340	ENSMUST00000204179	processed_pseudogene		CHR_MG4151_PATCH	-1	3284038	880
ENSMUSG00000107537	lncRNA	Gm35037	ENSMUST00000203384	lncRNA		CHR_MG4151_PATCH	1	3449873	506
ENSMUSG00000107636	lncRNA	Gm44257	ENSMUST00000204439	lncRNA		CHR_MG4151_PATCH	-1	3388596	1446
ENSMUSG00000107910	unprocessed_pseudogene	Gm20553	ENSMUST00000203119	unprocessed_pseudogene		CHR_MG4151_PATCH	-1	3264620	844
ENSMUSG00000107912	lncRNA	Gm44151	ENSMUST00000204506	lncRNA		CHR_MG4151_PATCH	-1	3399442	259
ENSMUSG00000108051	TEC	Gm44256	ENSMUST00000203113	TEC		CHR_MG4151_PATCH	1	3336061	335
ENSMUSG00000108281	lncRNA	3300002P13Rik	ENSMUST00000204156	lncRNA		CHR_MG4151_PATCH	-1	3421961	1092
ENSMUSG00000113176	lncRNA	Gm34081	ENSMUST00000222140	lncRNA		CHR_MG4180_PATCH	-1	109516740	690
ENSMUSG00000113988	TEC	Gm27528	ENSMUST00000222296	TEC		CHR_MG4180_PATCH	1	109530891	2012
ENSMUSG00000115865	protein_coding	9830107B12Rik	ENSMUST00000230197	protein_coding		CHR_MG4200_PATCH	-1	48142514	3600
ENSMUSG00000115865	protein_coding	9830107B12Rik	ENSMUST00000233700	protein_coding		CHR_MG4200_PATCH	-1	48142424	2921
ENSMUSG00000115865	protein_coding	9830107B12Rik	ENSMUST00000232786	protein_coding		CHR_MG4200_PATCH	-1	48142497	1871
ENSMUSG00000115890	pseudogene	MF597746.1	ENSMUST00000214894	pseudogene		CHR_MG4200_PATCH	-1	48187469	303
ENSMUSG00000115900	protein_coding	Treml4	ENSMUST00000231060	protein_coding		CHR_MG4200_PATCH	1	48260398	1744
ENSMUSG00000115900	protein_coding	Treml4	ENSMUST00000229406	protein_coding		CHR_MG4200_PATCH	1	48260440	838
ENSMUSG00000115900	protein_coding	Treml4	ENSMUST00000231119	protein_coding		CHR_MG4200_PATCH	1	48260440	811
ENSMUSG00000115900	protein_coding	Treml4	ENSMUST00000230896	protein_coding		CHR_MG4200_PATCH	1	48260444	992
ENSMUSG00000115900	protein_coding	Treml4	ENSMUST00000230602	protein_coding		CHR_MG4200_PATCH	1	48260476	676
ENSMUSG00000115900	protein_coding	Treml4	ENSMUST00000229758	retained_intron		CHR_MG4200_PATCH	1	48268542	513
ENSMUSG00000115934	protein_coding	1700067P10Rik	ENSMUST00000230934	protein_coding		CHR_MG4200_PATCH	1	48088914	1105
ENSMUSG00000115934	protein_coding	1700067P10Rik	ENSMUST00000232881	protein_coding		CHR_MG4200_PATCH	1	48089277	1073
ENSMUSG00000115977	pseudogene	AC119998.1	ENSMUST00000230310	pseudogene		CHR_MG4198_PATCH	-1	7609342	159
ENSMUSG00000115982	protein_coding	Trem1	ENSMUST00000229689	protein_coding		CHR_MG4200_PATCH	1	48228871	2077
ENSMUSG00000115982	protein_coding	Trem1	ENSMUST00000228979	protein_coding		CHR_MG4200_PATCH	1	48228874	2993
ENSMUSG00000116059	protein_coding	1700122O11Rik	ENSMUST00000229393	protein_coding		CHR_MG4200_PATCH	-1	48038177	771
ENSMUSG00000116153	protein_coding	Treml2	ENSMUST00000233080	processed_transcript		CHR_MG4200_PATCH	1	48295601	984
ENSMUSG00000116153	protein_coding	Treml2	ENSMUST00000233265	protein_coding		CHR_MG4200_PATCH	1	48296043	2094
ENSMUSG00000116153	protein_coding	Treml2	ENSMUST00000233446	processed_transcript		CHR_MG4200_PATCH	1	48296458	770
ENSMUSG00000116153	protein_coding	Treml2	ENSMUST00000229228	protein_coding		CHR_MG4200_PATCH	1	48296489	3983
ENSMUSG00000116176	protein_coding	Trem3	ENSMUST00000230731	protein_coding		CHR_MG4200_PATCH	1	48243880	994
ENSMUSG00000116225	protein_coding	B430306N03Rik	ENSMUST00000231101	protein_coding		CHR_MG4200_PATCH	1	48312244	3996
ENSMUSG00000116225	protein_coding	B430306N03Rik	ENSMUST00000229649	nonsense_mediated_decay		CHR_MG4200_PATCH	1	48312512	994
ENSMUSG00000116225	protein_coding	B430306N03Rik	ENSMUST00000230233	retained_intron		CHR_MG4200_PATCH	1	48312527	1543
ENSMUSG00000116313	lncRNA	Gm15556	ENSMUST00000231093	lncRNA		CHR_MG4200_PATCH	1	47922378	663
ENSMUSG00000116448	processed_pseudogene	Gm5228	ENSMUST00000229593	processed_pseudogene		CHR_MG4200_PATCH	1	47936090	357
ENSMUSG00000116459	lncRNA	4930428N03Rik	ENSMUST00000230834	lncRNA		CHR_MG4162_PATCH	1	24617557	892
ENSMUSG00000116459	lncRNA	4930428N03Rik	ENSMUST00000230096	lncRNA		CHR_MG4162_PATCH	1	24617568	986
ENSMUSG00000116459	lncRNA	4930428N03Rik	ENSMUST00000229934	lncRNA		CHR_MG4162_PATCH	1	24619031	3212
ENSMUSG00000116459	lncRNA	4930428N03Rik	ENSMUST00000229568	lncRNA		CHR_MG4162_PATCH	1	24622138	370
ENSMUSG00000116459	lncRNA	4930428N03Rik	ENSMUST00000230338	lncRNA		CHR_MG4162_PATCH	1	24622159	756
ENSMUSG00000116468	protein_coding	A530064D06Rik	ENSMUST00000231142	protein_coding		CHR_MG4200_PATCH	-1	48163231	687
ENSMUSG00000116468	protein_coding	A530064D06Rik	ENSMUST00000233018	protein_coding		CHR_MG4200_PATCH	-1	48163231	687
ENSMUSG00000116468	protein_coding	A530064D06Rik	ENSMUST00000230500	protein_coding		CHR_MG4200_PATCH	-1	48163231	480
ENSMUSG00000116468	protein_coding	A530064D06Rik	ENSMUST00000233558	protein_coding		CHR_MG4200_PATCH	-1	48163231	480
ENSMUSG00000116489	processed_pseudogene	Gm14871	ENSMUST00000230292	processed_pseudogene		CHR_MG4200_PATCH	-1	48003572	194
ENSMUSG00000116496	protein_coding	Foxp4	ENSMUST00000229858	protein_coding		CHR_MG4200_PATCH	-1	47924645	3999
ENSMUSG00000116496	protein_coding	Foxp4	ENSMUST00000230549	protein_coding		CHR_MG4200_PATCH	-1	47924400	3156
ENSMUSG00000116496	protein_coding	Foxp4	ENSMUST00000229396	protein_coding		CHR_MG4200_PATCH	-1	47924435	3197
ENSMUSG00000116496	protein_coding	Foxp4	ENSMUST00000229005	protein_coding		CHR_MG4200_PATCH	-1	47924476	3198
ENSMUSG00000116496	protein_coding	Foxp4	ENSMUST00000229314	processed_transcript		CHR_MG4200_PATCH	-1	47888433	701
ENSMUSG00000116496	protein_coding	Foxp4	ENSMUST00000229812	protein_coding		CHR_MG4200_PATCH	-1	47878953	365
ENSMUSG00000116496	protein_coding	Foxp4	ENSMUST00000230153	retained_intron		CHR_MG4200_PATCH	-1	47888150	579
ENSMUSG00000116496	protein_coding	Foxp4	ENSMUST00000230885	retained_intron		CHR_MG4200_PATCH	-1	47924426	788
ENSMUSG00000116541	lncRNA	Gm33086	ENSMUST00000232606	lncRNA		CHR_MG4198_PATCH	1	7527623	338
ENSMUSG00000116541	lncRNA	Gm33086	ENSMUST00000231313	lncRNA		CHR_MG4198_PATCH	1	7527693	257
ENSMUSG00000116584	processed_pseudogene	Gm6553	ENSMUST00000231321	processed_pseudogene		CHR_MG4198_PATCH	-1	7430242	956
ENSMUSG00000116787	lncRNA	Gm49632	ENSMUST00000231294	lncRNA		CHR_MG4198_PATCH	1	7596761	624
ENSMUSG00000117087	lncRNA	A730006G06Rik	ENSMUST00000233308	lncRNA		CHR_MG4200_PATCH	-1	48089973	1829
ENSMUSG00000117144	processed_pseudogene	Gm18679	ENSMUST00000233810	processed_pseudogene		CHR_MG4200_PATCH	-1	48236744	1766
ENSMUSG00000117153	processed_pseudogene	Gm49947	ENSMUST00000233229	processed_pseudogene		CHR_MG4200_PATCH	-1	48138150	180
ENSMUSG00000117212	processed_pseudogene	Gm20596	ENSMUST00000233435	processed_pseudogene		CHR_MG4200_PATCH	-1	48056607	153
ENSMUSG00000117242	lncRNA	Gm49946	ENSMUST00000232935	lncRNA		CHR_MG4200_PATCH	1	48092374	1136
ENSMUSG00000118564	lncRNA	B830012L14Rik	ENSMUST00000238923	lncRNA		CHR_MG4180_PATCH	1	109676785	4443
ENSMUSG00000118564	lncRNA	B830012L14Rik	ENSMUST00000238985	lncRNA		CHR_MG4180_PATCH	1	109678596	5167
ENSMUSG00000118564	lncRNA	B830012L14Rik	ENSMUST00000238933	lncRNA		CHR_MG4180_PATCH	1	109678596	3230
ENSMUSG00000118564	lncRNA	B830012L14Rik	ENSMUST00000239044	lncRNA		CHR_MG4180_PATCH	1	109695465	1823
ENSMUSG00000118564	lncRNA	B830012L14Rik	ENSMUST00000238869	lncRNA		CHR_MG4180_PATCH	1	109696094	4505
ENSMUSG00000082803	miRNA	Gm26460	ENSMUST00000121335	miRNA		CHR_MG4249_PATCH	1	6563780	126
ENSMUSG00000096928	unprocessed_pseudogene	Rhox11-ps2	ENSMUST00000181459	unprocessed_pseudogene		CHR_MG4214_PATCH	-1	37852826	451
ENSMUSG00000097126	protein_coding	Rhox8	ENSMUST00000180817	protein_coding		CHR_MG4214_PATCH	-1	37786168	1204
ENSMUSG00000097144	unprocessed_pseudogene	Rhox11-ps1	ENSMUST00000181583	unprocessed_pseudogene		CHR_MG4214_PATCH	-1	37840707	387
ENSMUSG00000097200	protein_coding	Rhox6	ENSMUST00000181916	protein_coding		CHR_MG4214_PATCH	1	37734134	1010
ENSMUSG00000097270	protein_coding	Rhox7b	ENSMUST00000181431	protein_coding		CHR_MG4214_PATCH	-1	37804456	1091
ENSMUSG00000097306	protein_coding	Rhox5	ENSMUST00000185127	protein_coding		CHR_MG4214_PATCH	1	37711616	754
ENSMUSG00000097306	protein_coding	Rhox5	ENSMUST00000180893	protein_coding		CHR_MG4214_PATCH	1	37711625	633
ENSMUSG00000097395	protein_coding	Gm21083	ENSMUST00000180642	protein_coding		CHR_MG4212_PATCH	1	15605317	1141
ENSMUSG00000097436	protein_coding	Rhox9	ENSMUST00000180665	protein_coding		CHR_MG4214_PATCH	-1	37808928	2422
ENSMUSG00000097436	protein_coding	Rhox9	ENSMUST00000181131	protein_coding		CHR_MG4214_PATCH	-1	37808994	882
ENSMUSG00000097490	protein_coding	Gm21149	ENSMUST00000181616	protein_coding		CHR_MG4212_PATCH	-1	15504507	1212
ENSMUSG00000097570	lncRNA	Gm21847	ENSMUST00000180976	lncRNA		CHR_MG4212_PATCH	1	15544473	1068
ENSMUSG00000097570	lncRNA	Gm21847	ENSMUST00000202947	lncRNA		CHR_MG4212_PATCH	1	15551068	883
ENSMUSG00000097600	protein_coding	Rhox7a	ENSMUST00000181659	protein_coding		CHR_MG4214_PATCH	1	37738910	983
ENSMUSG00000097600	protein_coding	Rhox7a	ENSMUST00000184819	nonsense_mediated_decay		CHR_MG4214_PATCH	1	37745076	409
ENSMUSG00000097611	protein_coding	Gm21190	ENSMUST00000180499	protein_coding		CHR_MG4212_PATCH	-1	15557206	1167
ENSMUSG00000097696	protein_coding	Speer4d	ENSMUST00000180847	protein_coding		CHR_MG4212_PATCH	1	15647048	1194
ENSMUSG00000097696	protein_coding	Speer4d	ENSMUST00000180994	protein_coding		CHR_MG4212_PATCH	1	15648146	857
ENSMUSG00000098283	processed_pseudogene	Gm17377	ENSMUST00000183524	processed_pseudogene		CHR_MG4222_MG3908_PATCH	1	55321585	206
ENSMUSG00000098587	snRNA	Gm22654	ENSMUST00000184569	snRNA		CHR_MG4222_MG3908_PATCH	1	55661609	105
ENSMUSG00000098633	protein_coding	St6gal2	ENSMUST00000184342	protein_coding		CHR_MG4222_MG3908_PATCH	1	55445355	1556
ENSMUSG00000098633	protein_coding	St6gal2	ENSMUST00000184253	protein_coding		CHR_MG4222_MG3908_PATCH	1	55445362	2606
ENSMUSG00000098633	protein_coding	St6gal2	ENSMUST00000183712	protein_coding		CHR_MG4222_MG3908_PATCH	1	55445523	6066
ENSMUSG00000098633	protein_coding	St6gal2	ENSMUST00000184413	processed_transcript		CHR_MG4222_MG3908_PATCH	1	55446217	647
ENSMUSG00000098835	protein_coding	Pot1b	ENSMUST00000233826	nonsense_mediated_decay		CHR_MG4222_MG3908_PATCH	-1	55712550	3582
ENSMUSG00000098835	protein_coding	Pot1b	ENSMUST00000184775	protein_coding		CHR_MG4222_MG3908_PATCH	-1	55712550	3523
ENSMUSG00000098835	protein_coding	Pot1b	ENSMUST00000233037	protein_coding		CHR_MG4222_MG3908_PATCH	-1	55712596	2185
ENSMUSG00000098835	protein_coding	Pot1b	ENSMUST00000232825	protein_coding		CHR_MG4222_MG3908_PATCH	-1	55712579	663
ENSMUSG00000098835	protein_coding	Pot1b	ENSMUST00000233232	retained_intron		CHR_MG4222_MG3908_PATCH	-1	55712600	1813
ENSMUSG00000099175	protein_coding	Vmn2r118	ENSMUST00000184305	protein_coding		CHR_MG4222_MG3908_PATCH	-1	55625164	5053
ENSMUSG00000099175	protein_coding	Vmn2r118	ENSMUST00000234986	nonsense_mediated_decay		CHR_MG4222_MG3908_PATCH	-1	55625164	5290
ENSMUSG00000099175	protein_coding	Vmn2r118	ENSMUST00000234940	nonsense_mediated_decay		CHR_MG4222_MG3908_PATCH	-1	55625164	4755
ENSMUSG00000099175	protein_coding	Vmn2r118	ENSMUST00000234325	nonsense_mediated_decay		CHR_MG4222_MG3908_PATCH	-1	55625164	4700
ENSMUSG00000099402	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000186181	processed_transcript		CHR_MG4211_PATCH	1	66211652	1104
ENSMUSG00000099402	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000185522	processed_transcript		CHR_MG4211_PATCH	1	66211708	543
ENSMUSG00000099402	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000186272	processed_transcript		CHR_MG4211_PATCH	1	66211709	255
ENSMUSG00000099402	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000191579	processed_transcript		CHR_MG4211_PATCH	1	66211740	302
ENSMUSG00000099402	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000190414	processed_transcript		CHR_MG4211_PATCH	1	66211752	397
ENSMUSG00000099402	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000188794	transcribed_unprocessed_pseudogene		CHR_MG4211_PATCH	1	66213259	615
ENSMUSG00000099402	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000189891	processed_transcript		CHR_MG4211_PATCH	1	66213696	229
ENSMUSG00000099402	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000187466	processed_transcript		CHR_MG4211_PATCH	1	66213696	542
ENSMUSG00000099402	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000186063	processed_transcript		CHR_MG4211_PATCH	1	66213696	327
ENSMUSG00000099402	transcribed_unprocessed_pseudogene	Gm28136	ENSMUST00000190812	processed_transcript		CHR_MG4211_PATCH	1	66215191	675
ENSMUSG00000099533	lncRNA	Gm28133	ENSMUST00000186749	lncRNA		CHR_MG4211_PATCH	-1	66134654	1158
ENSMUSG00000099533	lncRNA	Gm28133	ENSMUST00000185461	lncRNA		CHR_MG4211_PATCH	-1	66134545	438
ENSMUSG00000099567	unprocessed_pseudogene	Gm29267	ENSMUST00000191184	unprocessed_pseudogene		CHR_MG4213_PATCH	-1	49393397	378
ENSMUSG00000099885	lncRNA	Gm28851	ENSMUST00000189266	lncRNA		CHR_MG4209_PATCH	1	45851118	484
ENSMUSG00000099885	lncRNA	Gm28851	ENSMUST00000188566	lncRNA		CHR_MG4209_PATCH	1	45851118	174
ENSMUSG00000099919	lncRNA	Gm28138	ENSMUST00000187112	lncRNA		CHR_MG4211_PATCH	1	66166884	2167
ENSMUSG00000100102	lncRNA	Gm29270	ENSMUST00000190888	lncRNA		CHR_MG4213_PATCH	-1	49469131	2167
ENSMUSG00000101274	lncRNA	Gm28137	ENSMUST00000189272	lncRNA		CHR_MG4211_PATCH	1	66131968	416
ENSMUSG00000102165	lncRNA	Gm29271	ENSMUST00000193783	lncRNA		CHR_MG4213_PATCH	1	49501018	1499
ENSMUSG00000102165	lncRNA	Gm29271	ENSMUST00000193298	lncRNA		CHR_MG4213_PATCH	1	49501471	438
ENSMUSG00000102165	lncRNA	Gm29271	ENSMUST00000192822	lncRNA		CHR_MG4213_PATCH	1	49501471	622
ENSMUSG00000102209	lncRNA	Gm28456	ENSMUST00000191741	lncRNA		CHR_MG4209_PATCH	1	45874035	622
ENSMUSG00000102209	lncRNA	Gm28456	ENSMUST00000193318	lncRNA		CHR_MG4209_PATCH	1	45874035	437
ENSMUSG00000102435	unprocessed_pseudogene	Gm21308	ENSMUST00000194725	unprocessed_pseudogene		CHR_MG4213_PATCH	-1	49318753	696
ENSMUSG00000103117	unprocessed_pseudogene	Gm21837	ENSMUST00000193068	unprocessed_pseudogene		CHR_MG4211_PATCH	1	66176325	696
ENSMUSG00000103455	unprocessed_pseudogene	Gm29269	ENSMUST00000194983	unprocessed_pseudogene		CHR_MG4213_PATCH	-1	49459952	696
ENSMUSG00000103868	unprocessed_pseudogene	Gm29268	ENSMUST00000191957	unprocessed_pseudogene		CHR_MG4213_PATCH	-1	49422963	615
ENSMUSG00000104359	unprocessed_pseudogene	Gm29073	ENSMUST00000195861	unprocessed_pseudogene		CHR_MG4209_PATCH	1	45949660	664
ENSMUSG00000106684	lncRNA	Gm43391	ENSMUST00000201382	lncRNA		CHR_MG4212_PATCH	1	15492155	883
ENSMUSG00000106684	lncRNA	Gm43391	ENSMUST00000202924	lncRNA		CHR_MG4212_PATCH	1	15498323	297
ENSMUSG00000106684	lncRNA	Gm43391	ENSMUST00000202832	lncRNA		CHR_MG4212_PATCH	1	15501009	1001
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000201065	protein_coding		CHR_MG4249_PATCH	1	6399340	2296
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202484	protein_coding		CHR_MG4249_PATCH	1	6399456	573
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000201962	protein_coding		CHR_MG4249_PATCH	1	6399746	429
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202181	protein_coding		CHR_MG4249_PATCH	1	6399864	352
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000201729	protein_coding		CHR_MG4249_PATCH	1	6399868	453
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000201063	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6399874	648
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202319	processed_transcript		CHR_MG4249_PATCH	1	6399917	430
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000200858	protein_coding		CHR_MG4249_PATCH	1	6400113	2124
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000201255	processed_transcript		CHR_MG4249_PATCH	1	6400527	459
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000201596	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6400533	2157
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000201411	protein_coding		CHR_MG4249_PATCH	1	6400547	641
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000200777	protein_coding		CHR_MG4249_PATCH	1	6400562	2219
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202609	protein_coding		CHR_MG4249_PATCH	1	6400564	829
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000200711	protein_coding		CHR_MG4249_PATCH	1	6400583	2192
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202628	protein_coding		CHR_MG4249_PATCH	1	6400623	409
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202054	processed_transcript		CHR_MG4249_PATCH	1	6401695	403
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000201395	protein_coding		CHR_MG4249_PATCH	1	6401702	535
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202309	protein_coding		CHR_MG4249_PATCH	1	6401718	439
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202490	processed_transcript		CHR_MG4249_PATCH	1	6401719	442
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000201930	retained_intron		CHR_MG4249_PATCH	1	6402918	660
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202397	retained_intron		CHR_MG4249_PATCH	1	6404582	384
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000201082	retained_intron		CHR_MG4249_PATCH	1	6404741	1517
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202442	retained_intron		CHR_MG4249_PATCH	1	6404827	8815
ENSMUSG00000106685	protein_coding	Rasgrp2	ENSMUST00000202813	retained_intron		CHR_MG4249_PATCH	1	6408405	919
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000202978	protein_coding		CHR_MG4249_PATCH	1	6334979	2663
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000201807	protein_coding		CHR_MG4249_PATCH	1	6334979	2652
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000202550	protein_coding		CHR_MG4249_PATCH	1	6335013	2639
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000201284	protein_coding		CHR_MG4249_PATCH	1	6335039	2975
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000202901	protein_coding		CHR_MG4249_PATCH	1	6335039	2508
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000235646	protein_coding		CHR_MG4249_PATCH	1	6335040	383
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000202851	retained_intron		CHR_MG4249_PATCH	1	6335046	3002
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000202424	protein_coding		CHR_MG4249_PATCH	1	6335047	2742
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000201738	protein_coding		CHR_MG4249_PATCH	1	6335064	295
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000202062	protein_coding		CHR_MG4249_PATCH	1	6335111	2738
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000202420	protein_coding		CHR_MG4249_PATCH	1	6335461	1851
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000202517	protein_coding		CHR_MG4249_PATCH	1	6336910	405
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000236442	retained_intron		CHR_MG4249_PATCH	1	6338915	732
ENSMUSG00000106695	protein_coding	Men1	ENSMUST00000202811	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6339847	664
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000201145	protein_coding		CHR_MG4249_PATCH	1	6363690	4353
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000201978	protein_coding		CHR_MG4249_PATCH	1	6363719	2863
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000202407	protein_coding		CHR_MG4249_PATCH	1	6363810	2282
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000201748	retained_intron		CHR_MG4249_PATCH	1	6363922	489
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000201388	protein_coding		CHR_MG4249_PATCH	1	6363922	2649
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000201278	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6363922	3221
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000200699	retained_intron		CHR_MG4249_PATCH	1	6363963	869
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000201508	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6364194	718
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000201369	protein_coding		CHR_MG4249_PATCH	1	6364557	1000
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000200811	processed_transcript		CHR_MG4249_PATCH	1	6370119	455
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000201587	retained_intron		CHR_MG4249_PATCH	1	6370712	785
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000200731	retained_intron		CHR_MG4249_PATCH	1	6372413	408
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000201909	protein_coding		CHR_MG4249_PATCH	1	6373621	905
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000201940	protein_coding		CHR_MG4249_PATCH	1	6374010	755
ENSMUSG00000106722	protein_coding	Sf1	ENSMUST00000202996	protein_coding		CHR_MG4249_PATCH	1	6374129	513
ENSMUSG00000106792	processed_pseudogene	Hmgb1-ps4	ENSMUST00000200952	processed_pseudogene		CHR_MG4249_PATCH	-1	6593236	635
ENSMUSG00000106796	lncRNA	Gm14968	ENSMUST00000201826	lncRNA		CHR_MG4249_PATCH	1	6645687	769
ENSMUSG00000106823	lncRNA	Gm14963	ENSMUST00000202185	lncRNA		CHR_MG4249_PATCH	-1	6276605	2558
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000202310	retained_intron		CHR_MG4249_PATCH	1	6341135	5086
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000201474	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6341155	485
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000200679	protein_coding		CHR_MG4249_PATCH	1	6341160	4644
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000201247	processed_transcript		CHR_MG4249_PATCH	1	6341191	398
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000201922	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6341208	4256
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000202467	retained_intron		CHR_MG4249_PATCH	1	6341216	647
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000202879	protein_coding		CHR_MG4249_PATCH	1	6341224	1079
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000202737	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6341250	2413
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000202271	retained_intron		CHR_MG4249_PATCH	1	6341250	2875
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000202808	retained_intron		CHR_MG4249_PATCH	1	6341270	775
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000201677	processed_transcript		CHR_MG4249_PATCH	1	6341418	552
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000201643	processed_transcript		CHR_MG4249_PATCH	1	6341449	637
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000202516	retained_intron		CHR_MG4249_PATCH	1	6341779	2119
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000202114	retained_intron		CHR_MG4249_PATCH	1	6342537	223
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000200706	retained_intron		CHR_MG4249_PATCH	1	6343516	613
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000201622	retained_intron		CHR_MG4249_PATCH	1	6345350	611
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000237656	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6346399	661
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000201652	retained_intron		CHR_MG4249_PATCH	1	6346549	1458
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000200991	retained_intron		CHR_MG4249_PATCH	1	6346669	467
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000201898	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6346692	1080
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000201935	retained_intron		CHR_MG4249_PATCH	1	6350909	518
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000202549	nonsense_mediated_decay		CHR_MG4249_PATCH	1	6352620	2267
ENSMUSG00000106850	protein_coding	Map4k2	ENSMUST00000200712	processed_transcript		CHR_MG4249_PATCH	1	6352775	259
ENSMUSG00000106877	protein_coding	Pygm	ENSMUST00000201001	protein_coding		CHR_MG4249_PATCH	1	6384399	2874
ENSMUSG00000106877	protein_coding	Pygm	ENSMUST00000200962	protein_coding		CHR_MG4249_PATCH	1	6384415	2583
ENSMUSG00000106877	protein_coding	Pygm	ENSMUST00000201459	retained_intron		CHR_MG4249_PATCH	1	6392711	638
ENSMUSG00000106877	protein_coding	Pygm	ENSMUST00000201904	retained_intron		CHR_MG4249_PATCH	1	6397495	532
ENSMUSG00000106907	protein_coding	Atg2a	ENSMUST00000201269	protein_coding		CHR_MG4249_PATCH	1	6241668	6371
ENSMUSG00000106907	protein_coding	Atg2a	ENSMUST00000202877	protein_coding		CHR_MG4249_PATCH	1	6245465	5613
ENSMUSG00000106907	protein_coding	Atg2a	ENSMUST00000201058	retained_intron		CHR_MG4249_PATCH	1	6251488	706
ENSMUSG00000106907	protein_coding	Atg2a	ENSMUST00000202686	retained_intron		CHR_MG4249_PATCH	1	6256371	1575
ENSMUSG00000106907	protein_coding	Atg2a	ENSMUST00000238173	processed_transcript		CHR_MG4249_PATCH	1	6257787	658
ENSMUSG00000106907	protein_coding	Atg2a	ENSMUST00000202429	retained_intron		CHR_MG4249_PATCH	1	6258341	672
ENSMUSG00000106923	protein_coding	Sirpb1c	ENSMUST00000201344	protein_coding		CHR_MG4248_PATCH	-1	15864892	892
ENSMUSG00000106923	protein_coding	Sirpb1c	ENSMUST00000201040	protein_coding		CHR_MG4248_PATCH	-1	15874668	1275
ENSMUSG00000106923	protein_coding	Sirpb1c	ENSMUST00000202715	protein_coding		CHR_MG4248_PATCH	-1	15874696	1436
ENSMUSG00000106923	protein_coding	Sirpb1c	ENSMUST00000202173	protein_coding		CHR_MG4248_PATCH	-1	15874777	1499
ENSMUSG00000106923	protein_coding	Sirpb1c	ENSMUST00000201131	protein_coding		CHR_MG4248_PATCH	-1	15874740	2489
ENSMUSG00000106923	protein_coding	Sirpb1c	ENSMUST00000201103	protein_coding		CHR_MG4248_PATCH	-1	15874692	1994
ENSMUSG00000106923	protein_coding	Sirpb1c	ENSMUST00000201988	processed_transcript		CHR_MG4248_PATCH	-1	15874703	588
ENSMUSG00000106923	protein_coding	Sirpb1c	ENSMUST00000202450	retained_intron		CHR_MG4248_PATCH	-1	15864866	844
ENSMUSG00000106972	protein_coding	Majin	ENSMUST00000202532	protein_coding		CHR_MG4249_PATCH	1	6184388	1239
ENSMUSG00000106972	protein_coding	Majin	ENSMUST00000201785	protein_coding		CHR_MG4249_PATCH	1	6184467	1562
ENSMUSG00000106983	miRNA	Mir6989	ENSMUST00000200762	miRNA		CHR_MG4249_PATCH	1	6346480	65
ENSMUSG00000107003	lncRNA	2410152P15Rik	ENSMUST00000202738	lncRNA		CHR_MG4249_PATCH	-1	6674548	871
ENSMUSG00000107039	protein_coding	Ehd1	ENSMUST00000202020	protein_coding		CHR_MG4249_PATCH	1	6276725	3353
ENSMUSG00000107039	protein_coding	Ehd1	ENSMUST00000201003	retained_intron		CHR_MG4249_PATCH	1	6276925	629
ENSMUSG00000107039	protein_coding	Ehd1	ENSMUST00000202068	retained_intron		CHR_MG4249_PATCH	1	6294181	791
ENSMUSG00000107039	protein_coding	Ehd1	ENSMUST00000202888	processed_transcript		CHR_MG4249_PATCH	1	6297914	349
ENSMUSG00000107099	protein_coding	Slc22a12	ENSMUST00000202867	protein_coding		CHR_MG4249_PATCH	-1	6543032	2226
ENSMUSG00000107099	protein_coding	Slc22a12	ENSMUST00000202974	processed_transcript		CHR_MG4249_PATCH	-1	6541549	1192
ENSMUSG00000107099	protein_coding	Slc22a12	ENSMUST00000202211	protein_coding		CHR_MG4249_PATCH	-1	6542711	821
ENSMUSG00000107101	lncRNA	Gm30613	ENSMUST00000201434	lncRNA		CHR_MG4212_PATCH	-1	15633050	512
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000202301	protein_coding		CHR_MG4249_PATCH	1	6418731	6667
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000202948	retained_intron		CHR_MG4249_PATCH	1	6418738	4456
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000201950	protein_coding		CHR_MG4249_PATCH	1	6418738	6059
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000236159	protein_coding		CHR_MG4249_PATCH	1	6418765	5118
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000202580	protein_coding		CHR_MG4249_PATCH	1	6418765	5505
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000235467	protein_coding		CHR_MG4249_PATCH	1	6427923	5001
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000202463	protein_coding		CHR_MG4249_PATCH	1	6427937	6314
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000201577	processed_transcript		CHR_MG4249_PATCH	1	6428646	604
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000201938	protein_coding		CHR_MG4249_PATCH	1	6428646	648
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000202175	processed_transcript		CHR_MG4249_PATCH	1	6445460	739
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000202055	processed_transcript		CHR_MG4249_PATCH	1	6446298	818
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000201830	retained_intron		CHR_MG4249_PATCH	1	6454571	2748
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000201995	retained_intron		CHR_MG4249_PATCH	1	6473109	1933
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000235689	processed_transcript		CHR_MG4249_PATCH	1	6490827	725
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000201543	processed_transcript		CHR_MG4249_PATCH	1	6497671	547
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000201188	protein_coding		CHR_MG4249_PATCH	1	6497828	3503
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000200719	protein_coding		CHR_MG4249_PATCH	1	6497835	3285
ENSMUSG00000107104	protein_coding	Nrxn2	ENSMUST00000202198	processed_transcript		CHR_MG4249_PATCH	1	6517205	576
ENSMUSG00000107150	processed_pseudogene	Gm6321	ENSMUST00000201952	processed_pseudogene		CHR_MG4248_PATCH	-1	15918804	1090
ENSMUSG00000107156	miRNA	Mir194-2	ENSMUST00000200947	miRNA		CHR_MG4249_PATCH	1	6264643	86
ENSMUSG00000107166	protein_coding	Gm5150	ENSMUST00000200965	protein_coding		CHR_MG4248_PATCH	-1	16032686	1212
ENSMUSG00000107166	protein_coding	Gm5150	ENSMUST00000202896	protein_coding		CHR_MG4248_PATCH	-1	16032581	913
ENSMUSG00000107239	processed_pseudogene	Gm7343	ENSMUST00000201389	processed_pseudogene		CHR_MG4248_PATCH	-1	15969082	1061
ENSMUSG00000107250	lncRNA	Gm14966	ENSMUST00000202848	lncRNA		CHR_MG4249_PATCH	-1	6363535	649
ENSMUSG00000107250	lncRNA	Gm14966	ENSMUST00000201996	lncRNA		CHR_MG4249_PATCH	-1	6363759	518
ENSMUSG00000107268	protein_coding	Cdc42bpg	ENSMUST00000201699	protein_coding		CHR_MG4249_PATCH	1	6306456	5995
ENSMUSG00000107268	protein_coding	Cdc42bpg	ENSMUST00000200868	retained_intron		CHR_MG4249_PATCH	1	6321808	310
ENSMUSG00000107274	protein_coding	AC240971.1	ENSMUST00000201905	protein_coding		CHR_MG4211_PATCH	-1	66146387	1083
ENSMUSG00000107274	protein_coding	AC240971.1	ENSMUST00000231137	protein_coding		CHR_MG4211_PATCH	-1	66146387	1083
ENSMUSG00000107293	lncRNA	Gm14965	ENSMUST00000200986	lncRNA		CHR_MG4249_PATCH	-1	6418606	565
ENSMUSG00000107293	lncRNA	Gm14965	ENSMUST00000201850	retained_intron		CHR_MG4249_PATCH	-1	6418606	967
ENSMUSG00000107297	protein_coding	Gpha2	ENSMUST00000201025	protein_coding		CHR_MG4249_PATCH	1	6226380	609
ENSMUSG00000107297	protein_coding	Gpha2	ENSMUST00000201279	protein_coding		CHR_MG4249_PATCH	1	6226388	762
ENSMUSG00000107321	lncRNA	Gm14964	ENSMUST00000201735	lncRNA		CHR_MG4249_PATCH	-1	6532011	716
ENSMUSG00000107321	lncRNA	Gm14964	ENSMUST00000201326	lncRNA		CHR_MG4249_PATCH	-1	6531788	519
ENSMUSG00000107330	protein_coding	Ppp2r5b	ENSMUST00000202232	protein_coding		CHR_MG4249_PATCH	-1	6235872	2742
ENSMUSG00000107330	protein_coding	Ppp2r5b	ENSMUST00000235586	retained_intron		CHR_MG4249_PATCH	-1	6229416	740
ENSMUSG00000107330	protein_coding	Ppp2r5b	ENSMUST00000202824	retained_intron		CHR_MG4249_PATCH	-1	6230479	389
ENSMUSG00000107330	protein_coding	Ppp2r5b	ENSMUST00000202664	processed_transcript		CHR_MG4249_PATCH	-1	6235843	467
ENSMUSG00000107366	protein_coding	AC202135.1	ENSMUST00000201879	protein_coding		CHR_MG4213_PATCH	1	49489545	1083
ENSMUSG00000107366	protein_coding	AC202135.1	ENSMUST00000229894	protein_coding		CHR_MG4213_PATCH	1	49489545	1083
ENSMUSG00000107367	miRNA	Mir192	ENSMUST00000202882	miRNA		CHR_MG4249_PATCH	1	6264844	89
ENSMUSG00000111140	pseudogene	CT009635.1	ENSMUST00000216252	pseudogene		CHR_MG4222_MG3908_PATCH	-1	55383409	375
ENSMUSG00000111331	pseudogene	CT010495.1	ENSMUST00000216582	pseudogene		CHR_MG4222_MG3908_PATCH	-1	54762457	360
ENSMUSG00000111370	processed_pseudogene	Gm49920	ENSMUST00000217625	processed_pseudogene		CHR_MG4222_MG3908_PATCH	1	55063385	588
ENSMUSG00000111571	pseudogene	AC154679.1	ENSMUST00000213593	pseudogene		CHR_MG4222_MG3908_PATCH	-1	55179506	375
ENSMUSG00000111636	pseudogene	AC240971.2	ENSMUST00000213888	pseudogene		CHR_MG4211_PATCH	1	66240851	375
ENSMUSG00000111724	pseudogene	AC110514.1	ENSMUST00000213439	pseudogene		CHR_MG4222_MG3908_PATCH	1	55109429	375
ENSMUSG00000115893	pseudogene	AC242685.1	ENSMUST00000230635	pseudogene		CHR_MG4213_PATCH	1	49371368	288
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000228981	protein_coding		CHR_MG4200_PATCH	-1	48405868	3653
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000230861	protein_coding		CHR_MG4200_PATCH	-1	48406009	3706
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000230904	protein_coding		CHR_MG4200_PATCH	-1	48405868	3645
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000230962	protein_coding		CHR_MG4200_PATCH	-1	48396647	1255
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000229839	protein_coding		CHR_MG4200_PATCH	-1	48405833	1407
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000230899	protein_coding		CHR_MG4200_PATCH	-1	48389326	805
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000230323	protein_coding		CHR_MG4200_PATCH	-1	48389562	701
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000229298	retained_intron		CHR_MG4200_PATCH	-1	48388248	741
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000230846	protein_coding		CHR_MG4200_PATCH	-1	48395141	643
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000229115	protein_coding		CHR_MG4200_PATCH	-1	48405844	880
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000229630	retained_intron		CHR_MG4200_PATCH	-1	48392157	605
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000230316	retained_intron		CHR_MG4200_PATCH	-1	48405791	640
ENSMUSG00000115906	protein_coding	Nfya	ENSMUST00000231109	retained_intron		CHR_MG4200_PATCH	-1	48405853	2779
ENSMUSG00000115927	pseudogene	CT009635.2	ENSMUST00000230808	pseudogene		CHR_MG4222_MG3908_PATCH	1	55391307	288
ENSMUSG00000115974	protein_coding	Unc5cl	ENSMUST00000230883	protein_coding		CHR_MG4200_PATCH	1	48451004	2838
ENSMUSG00000115974	protein_coding	Unc5cl	ENSMUST00000229615	nonsense_mediated_decay		CHR_MG4200_PATCH	1	48458438	1786
ENSMUSG00000115974	protein_coding	Unc5cl	ENSMUST00000229959	nonsense_mediated_decay		CHR_MG4200_PATCH	1	48458463	782
ENSMUSG00000115974	protein_coding	Unc5cl	ENSMUST00000231070	protein_coding		CHR_MG4200_PATCH	1	48458469	426
ENSMUSG00000115974	protein_coding	Unc5cl	ENSMUST00000229430	nonsense_mediated_decay		CHR_MG4200_PATCH	1	48458487	1696
ENSMUSG00000115974	protein_coding	Unc5cl	ENSMUST00000230190	nonsense_mediated_decay		CHR_MG4200_PATCH	1	48458507	575
ENSMUSG00000116014	pseudogene	AC154679.2	ENSMUST00000230989	pseudogene		CHR_MG4222_MG3908_PATCH	1	55300301	288
ENSMUSG00000116034	pseudogene	CT009635.3	ENSMUST00000229258	pseudogene		CHR_MG4222_MG3908_PATCH	-1	55378295	609
ENSMUSG00000116046	pseudogene	AL731810.1	ENSMUST00000213532	pseudogene		CHR_MG4243_PATCH	-1	121432615	612
ENSMUSG00000116060	processed_pseudogene	Gm12892	ENSMUST00000231214	processed_pseudogene		CHR_MG4243_PATCH	1	121984265	1146
ENSMUSG00000116078	protein_coding	AC240971.3	ENSMUST00000228978	protein_coding		CHR_MG4211_PATCH	-1	66145274	528
ENSMUSG00000116078	protein_coding	AC240971.3	ENSMUST00000230037	protein_coding		CHR_MG4211_PATCH	-1	66145274	528
ENSMUSG00000116080	pseudogene	CT009635.4	ENSMUST00000228956	pseudogene		CHR_MG4222_MG3908_PATCH	1	55380057	1011
ENSMUSG00000116086	protein_coding	Apobec2	ENSMUST00000229603	protein_coding		CHR_MG4200_PATCH	-1	48429033	1420
ENSMUSG00000116086	protein_coding	Apobec2	ENSMUST00000233485	processed_transcript		CHR_MG4200_PATCH	-1	48428721	317
ENSMUSG00000116099	pseudogene	AL691519.1	ENSMUST00000230766	pseudogene		CHR_MG4243_PATCH	1	121887865	375
ENSMUSG00000116133	unprocessed_pseudogene	Gm12880	ENSMUST00000229698	unprocessed_pseudogene		CHR_MG4243_PATCH	-1	121479450	494
ENSMUSG00000116146	protein_coding	Tspo2	ENSMUST00000230463	retained_intron		CHR_MG4200_PATCH	-1	48447595	3195
ENSMUSG00000116146	protein_coding	Tspo2	ENSMUST00000231155	protein_coding		CHR_MG4200_PATCH	-1	48447625	956
ENSMUSG00000116146	protein_coding	Tspo2	ENSMUST00000229647	protein_coding		CHR_MG4200_PATCH	-1	48446176	473
ENSMUSG00000116146	protein_coding	Tspo2	ENSMUST00000229697	protein_coding		CHR_MG4200_PATCH	-1	48446173	479
ENSMUSG00000116146	protein_coding	Tspo2	ENSMUST00000231094	processed_transcript		CHR_MG4200_PATCH	-1	48447620	345
ENSMUSG00000116221	snoRNA	Gm26162	ENSMUST00000229357	snoRNA		CHR_MG4243_PATCH	1	121509472	132
ENSMUSG00000116375	processed_pseudogene	Gm12878	ENSMUST00000229196	processed_pseudogene		CHR_MG4243_PATCH	1	121641446	332
ENSMUSG00000116425	protein_coding	Treml1	ENSMUST00000229215	protein_coding		CHR_MG4200_PATCH	1	48356019	1220
ENSMUSG00000116425	protein_coding	Treml1	ENSMUST00000229919	protein_coding		CHR_MG4200_PATCH	1	48356019	1235
ENSMUSG00000116425	protein_coding	Treml1	ENSMUST00000230462	protein_coding		CHR_MG4200_PATCH	1	48356022	974
ENSMUSG00000116425	protein_coding	Treml1	ENSMUST00000229435	retained_intron		CHR_MG4200_PATCH	1	48356022	1229
ENSMUSG00000116425	protein_coding	Treml1	ENSMUST00000230424	nonsense_mediated_decay		CHR_MG4200_PATCH	1	48356022	848
ENSMUSG00000116470	protein_coding	Trem2	ENSMUST00000229587	protein_coding		CHR_MG4200_PATCH	1	48342504	1088
ENSMUSG00000116470	protein_coding	Trem2	ENSMUST00000231172	retained_intron		CHR_MG4200_PATCH	1	48342543	4784
ENSMUSG00000116470	protein_coding	Trem2	ENSMUST00000231062	protein_coding		CHR_MG4200_PATCH	1	48342591	1056
ENSMUSG00000116470	protein_coding	Trem2	ENSMUST00000230871	processed_transcript		CHR_MG4200_PATCH	1	48342592	526
ENSMUSG00000116479	protein_coding	Gm12887	ENSMUST00000229448	protein_coding		CHR_MG4243_PATCH	-1	121622103	360
ENSMUSG00000116513	protein_coding	Oard1	ENSMUST00000230100	protein_coding		CHR_MG4200_PATCH	1	48406117	1324
ENSMUSG00000116513	protein_coding	Oard1	ENSMUST00000230012	protein_coding		CHR_MG4200_PATCH	1	48406183	1135
ENSMUSG00000116513	protein_coding	Oard1	ENSMUST00000232996	protein_coding		CHR_MG4200_PATCH	1	48406195	590
ENSMUSG00000117032	processed_pseudogene	Gm4471	ENSMUST00000233906	processed_pseudogene		CHR_MG4222_MG3908_PATCH	1	55247703	907
ENSMUSG00000117052	processed_pseudogene	Gm18648	ENSMUST00000233667	processed_pseudogene		CHR_MG4222_MG3908_PATCH	1	55700379	1411
ENSMUSG00000117097	processed_pseudogene	Gm49921	ENSMUST00000233118	processed_pseudogene		CHR_MG4222_MG3908_PATCH	-1	55388680	464
ENSMUSG00000117152	lncRNA	Gm49896	ENSMUST00000233951	lncRNA		CHR_MG4200_PATCH	1	48552836	635
ENSMUSG00000117155	lncRNA	Gm32055	ENSMUST00000232691	lncRNA		CHR_MG4222_MG3908_PATCH	1	54852535	819
ENSMUSG00000117261	lncRNA	Gm49893	ENSMUST00000233450	lncRNA		CHR_MG4200_PATCH	1	48413383	471
ENSMUSG00000117339	processed_pseudogene	Gm46577	ENSMUST00000232986	processed_pseudogene		CHR_MG4222_MG3908_PATCH	1	55143148	372
ENSMUSG00000117668	processed_pseudogene	Gm50198	ENSMUST00000236884	processed_pseudogene		CHR_MG4249_PATCH	-1	6331453	400
ENSMUSG00000117954	TEC	Gm50151	ENSMUST00000236342	TEC		CHR_MG4249_PATCH	-1	6460107	2689
ENSMUSG00000118095	unprocessed_pseudogene	Gm50435	ENSMUST00000236254	unprocessed_pseudogene		CHR_MG4249_PATCH	-1	6575362	489
ENSMUSG00000057626	processed_pseudogene	Rpl10-ps6	ENSMUST00000076465	processed_pseudogene		CHR_MG65_PATCH	-1	37295796	642
ENSMUSG00000106711	unprocessed_pseudogene	Gm7421	ENSMUST00000201986	unprocessed_pseudogene		CHR_MG4255_PATCH	-1	29477592	639
ENSMUSG00000106723	protein_coding	Duxf3	ENSMUST00000201582	protein_coding		CHR_MG4264_PATCH	-1	58256510	1486
ENSMUSG00000106723	protein_coding	Duxf3	ENSMUST00000201229	protein_coding		CHR_MG4264_PATCH	-1	58257172	2025
ENSMUSG00000106727	snoRNA	Snord85	ENSMUST00000201016	snoRNA		CHR_MG4266_PATCH	1	130701520	73
ENSMUSG00000106774	unprocessed_pseudogene	Gm10807	ENSMUST00000202716	unprocessed_pseudogene		CHR_MG4264_PATCH	-1	58253148	795
ENSMUSG00000106787	lncRNA	Gm2200	ENSMUST00000201513	lncRNA		CHR_MG4254_PATCH	1	29012994	764
ENSMUSG00000106903	protein_coding	Dcaf13	ENSMUST00000201446	protein_coding		CHR_MG4261_PATCH	1	38976016	1551
ENSMUSG00000106903	protein_coding	Dcaf13	ENSMUST00000227046	retained_intron		CHR_MG4261_PATCH	1	38988589	3389
ENSMUSG00000106903	protein_coding	Dcaf13	ENSMUST00000226926	retained_intron		CHR_MG4261_PATCH	1	38995404	6477
ENSMUSG00000106903	protein_coding	Dcaf13	ENSMUST00000226441	retained_intron		CHR_MG4261_PATCH	1	39008110	480
ENSMUSG00000106911	protein_coding	Snrnp40	ENSMUST00000201498	protein_coding		CHR_MG4265_PATCH	1	130360132	1584
ENSMUSG00000106911	protein_coding	Snrnp40	ENSMUST00000202518	processed_transcript		CHR_MG4265_PATCH	1	130360194	1752
ENSMUSG00000106911	protein_coding	Snrnp40	ENSMUST00000202295	processed_transcript		CHR_MG4265_PATCH	1	130362627	489
ENSMUSG00000106911	protein_coding	Snrnp40	ENSMUST00000201646	processed_transcript		CHR_MG4265_PATCH	1	130385022	1048
ENSMUSG00000106919	protein_coding	Gm4981	ENSMUST00000201975	protein_coding		CHR_MG4264_PATCH	-1	58261198	1854
ENSMUSG00000106929	protein_coding	Cthrc1	ENSMUST00000202235	protein_coding		CHR_MG4261_PATCH	1	38940083	1166
ENSMUSG00000106929	protein_coding	Cthrc1	ENSMUST00000228447	protein_coding		CHR_MG4261_PATCH	1	38940107	596
ENSMUSG00000106929	protein_coding	Cthrc1	ENSMUST00000201206	protein_coding		CHR_MG4261_PATCH	1	38940232	532
ENSMUSG00000106929	protein_coding	Cthrc1	ENSMUST00000202314	retained_intron		CHR_MG4261_PATCH	1	38947221	912
ENSMUSG00000106953	protein_coding	AW822073	ENSMUST00000205122	protein_coding		CHR_MG4264_PATCH	-1	58249427	1959
ENSMUSG00000106953	protein_coding	AW822073	ENSMUST00000201825	protein_coding		CHR_MG4264_PATCH	-1	58248023	555
ENSMUSG00000106964	protein_coding	FO907130.1	ENSMUST00000202264	protein_coding		CHR_MG4266_PATCH	1	130556592	600
ENSMUSG00000106964	protein_coding	FO907130.1	ENSMUST00000230598	protein_coding		CHR_MG4266_PATCH	1	130556592	600
ENSMUSG00000106966	protein_coding	Pum1	ENSMUST00000202551	protein_coding		CHR_MG4266_PATCH	1	130615207	5389
ENSMUSG00000106966	protein_coding	Pum1	ENSMUST00000200794	protein_coding		CHR_MG4266_PATCH	1	130615245	5058
ENSMUSG00000106966	protein_coding	Pum1	ENSMUST00000201060	protein_coding		CHR_MG4266_PATCH	1	130615245	4614
ENSMUSG00000106966	protein_coding	Pum1	ENSMUST00000201328	retained_intron		CHR_MG4266_PATCH	1	130615252	1273
ENSMUSG00000106966	protein_coding	Pum1	ENSMUST00000201424	protein_coding		CHR_MG4266_PATCH	1	130615253	693
ENSMUSG00000106966	protein_coding	Pum1	ENSMUST00000202398	protein_coding		CHR_MG4266_PATCH	1	130615272	4017
ENSMUSG00000106966	protein_coding	Pum1	ENSMUST00000200938	protein_coding		CHR_MG4266_PATCH	1	130615292	3991
ENSMUSG00000107007	protein_coding	Slc25a32	ENSMUST00000202369	protein_coding		CHR_MG4261_PATCH	-1	38975867	5905
ENSMUSG00000107007	protein_coding	Slc25a32	ENSMUST00000226790	nonsense_mediated_decay		CHR_MG4261_PATCH	-1	38975783	1837
ENSMUSG00000107007	protein_coding	Slc25a32	ENSMUST00000227588	protein_coding		CHR_MG4261_PATCH	-1	38975824	979
ENSMUSG00000107007	protein_coding	Slc25a32	ENSMUST00000228776	retained_intron		CHR_MG4261_PATCH	-1	38975824	653
ENSMUSG00000107051	unprocessed_pseudogene	Gm7415	ENSMUST00000202219	unprocessed_pseudogene		CHR_MG4254_PATCH	1	29128146	639
ENSMUSG00000107088	unprocessed_pseudogene	Gm19459	ENSMUST00000200997	unprocessed_pseudogene		CHR_MG4264_PATCH	-1	58265158	835
ENSMUSG00000107137	protein_coding	Fzd6	ENSMUST00000202117	protein_coding		CHR_MG4261_PATCH	1	38869185	4325
ENSMUSG00000107137	protein_coding	Fzd6	ENSMUST00000226685	retained_intron		CHR_MG4261_PATCH	1	38869431	647
ENSMUSG00000107137	protein_coding	Fzd6	ENSMUST00000226332	nonsense_mediated_decay		CHR_MG4261_PATCH	1	38869431	750
ENSMUSG00000107137	protein_coding	Fzd6	ENSMUST00000202152	protein_coding		CHR_MG4261_PATCH	1	38869484	4081
ENSMUSG00000107137	protein_coding	Fzd6	ENSMUST00000228841	nonsense_mediated_decay		CHR_MG4261_PATCH	1	38870538	458
ENSMUSG00000107210	unprocessed_pseudogene	Gm2066	ENSMUST00000201265	unprocessed_pseudogene		CHR_MG4255_PATCH	-1	29400001	389
ENSMUSG00000107249	protein_coding	Baalc	ENSMUST00000202657	protein_coding		CHR_MG4261_PATCH	1	38796295	2492
ENSMUSG00000107249	protein_coding	Baalc	ENSMUST00000227823	protein_coding		CHR_MG4261_PATCH	1	38797060	3963
ENSMUSG00000107267	snoRNA	Gm24789	ENSMUST00000202265	snoRNA		CHR_MG4261_PATCH	1	38903730	131
ENSMUSG00000107275	protein_coding	Gcc2	ENSMUST00000201365	protein_coding		CHR_MG4264_PATCH	1	58279994	6547
ENSMUSG00000107275	protein_coding	Gcc2	ENSMUST00000200958	nonsense_mediated_decay		CHR_MG4264_PATCH	1	58280005	570
ENSMUSG00000107275	protein_coding	Gcc2	ENSMUST00000202872	protein_coding		CHR_MG4264_PATCH	1	58280027	6230
ENSMUSG00000107275	protein_coding	Gcc2	ENSMUST00000202595	protein_coding		CHR_MG4264_PATCH	1	58280036	6400
ENSMUSG00000107275	protein_coding	Gcc2	ENSMUST00000201808	protein_coding		CHR_MG4264_PATCH	1	58280210	502
ENSMUSG00000107275	protein_coding	Gcc2	ENSMUST00000200818	processed_transcript		CHR_MG4264_PATCH	1	58280388	268
ENSMUSG00000107275	protein_coding	Gcc2	ENSMUST00000201455	retained_intron		CHR_MG4264_PATCH	1	58297943	2750
ENSMUSG00000107275	protein_coding	Gcc2	ENSMUST00000200865	protein_coding		CHR_MG4264_PATCH	1	58299454	545
ENSMUSG00000107275	protein_coding	Gcc2	ENSMUST00000201644	retained_intron		CHR_MG4264_PATCH	1	58310424	836
ENSMUSG00000107275	protein_coding	Gcc2	ENSMUST00000202225	retained_intron		CHR_MG4264_PATCH	1	58322907	1952
ENSMUSG00000108747	protein_coding	Zcchc17	ENSMUST00000205840	protein_coding		CHR_MG4265_PATCH	-1	130359943	2113
ENSMUSG00000108747	protein_coding	Zcchc17	ENSMUST00000206131	processed_transcript		CHR_MG4265_PATCH	-1	130318739	762
ENSMUSG00000108747	protein_coding	Zcchc17	ENSMUST00000206979	processed_transcript		CHR_MG4265_PATCH	-1	130344859	708
ENSMUSG00000108747	protein_coding	Zcchc17	ENSMUST00000205511	processed_transcript		CHR_MG4265_PATCH	-1	130338584	286
ENSMUSG00000108747	protein_coding	Zcchc17	ENSMUST00000205928	retained_intron		CHR_MG4265_PATCH	-1	130359916	2130
ENSMUSG00000110746	protein_coding	Ranbp3l	ENSMUST00000231196	processed_transcript		CHR_MG4288_PATCH	1	8967949	648
ENSMUSG00000110746	protein_coding	Ranbp3l	ENSMUST00000216795	protein_coding		CHR_MG4288_PATCH	1	8968002	767
ENSMUSG00000110746	protein_coding	Ranbp3l	ENSMUST00000228137	retained_intron		CHR_MG4288_PATCH	1	8968002	3294
ENSMUSG00000110746	protein_coding	Ranbp3l	ENSMUST00000214009	protein_coding		CHR_MG4288_PATCH	1	8968426	3017
ENSMUSG00000110746	protein_coding	Ranbp3l	ENSMUST00000228822	protein_coding		CHR_MG4288_PATCH	1	9007266	3393
ENSMUSG00000110796	pseudogene	FO082328.1	ENSMUST00000215989	pseudogene		CHR_MG4259_PATCH	-1	3075949	375
ENSMUSG00000110820	pseudogene	AC119928.1	ENSMUST00000216510	pseudogene		CHR_MG4281_PATCH	1	178212039	375
ENSMUSG00000110842	snRNA	Gm23026	ENSMUST00000216714	snRNA		CHR_MG65_PATCH	1	37474795	106
ENSMUSG00000110948	protein_coding	Catspere2	ENSMUST00000216373	nonsense_mediated_decay		CHR_MG4281_PATCH	1	177983423	3033
ENSMUSG00000110948	protein_coding	Catspere2	ENSMUST00000214430	protein_coding		CHR_MG4281_PATCH	1	177991435	1663
ENSMUSG00000110948	protein_coding	Catspere2	ENSMUST00000238961	nonsense_mediated_decay		CHR_MG4281_PATCH	1	177991435	3453
ENSMUSG00000110948	protein_coding	Catspere2	ENSMUST00000214825	nonsense_mediated_decay		CHR_MG4281_PATCH	1	177991436	3494
ENSMUSG00000110948	protein_coding	Catspere2	ENSMUST00000238470	protein_coding		CHR_MG4281_PATCH	1	177991436	3426
ENSMUSG00000110948	protein_coding	Catspere2	ENSMUST00000238925	protein_coding		CHR_MG4281_PATCH	1	177991436	3494
ENSMUSG00000110990	processed_pseudogene	Gm46649	ENSMUST00000216267	processed_pseudogene		CHR_MG65_PATCH	-1	37424896	406
ENSMUSG00000111009	protein_coding	BX890553.1	ENSMUST00000216537	protein_coding		CHR_MG4254_PATCH	1	29153462	153
ENSMUSG00000111009	protein_coding	BX890553.1	ENSMUST00000229462	protein_coding		CHR_MG4254_PATCH	1	29153462	153
ENSMUSG00000111040	pseudogene	FO082328.2	ENSMUST00000215157	pseudogene		CHR_MG4259_PATCH	-1	3053391	324
ENSMUSG00000111101	protein_coding	AC166710.1	ENSMUST00000214927	protein_coding		CHR_MG4281_PATCH	-1	178276638	543
ENSMUSG00000111101	protein_coding	AC166710.1	ENSMUST00000230344	protein_coding		CHR_MG4281_PATCH	-1	178276638	543
ENSMUSG00000111123	protein_coding	Marchf5	ENSMUST00000215066	protein_coding		CHR_MG65_PATCH	1	37207543	1809
ENSMUSG00000111123	protein_coding	Marchf5	ENSMUST00000216250	protein_coding		CHR_MG65_PATCH	1	37207568	1293
ENSMUSG00000111123	protein_coding	Marchf5	ENSMUST00000217500	retained_intron		CHR_MG65_PATCH	1	37207576	991
ENSMUSG00000111123	protein_coding	Marchf5	ENSMUST00000214998	protein_coding		CHR_MG65_PATCH	1	37217190	1033
ENSMUSG00000111145	protein_coding	Hnrnpu	ENSMUST00000214467	processed_transcript		CHR_MG4281_PATCH	-1	178324170	2640
ENSMUSG00000111145	protein_coding	Hnrnpu	ENSMUST00000213673	nonsense_mediated_decay		CHR_MG4281_PATCH	-1	178337727	2844
ENSMUSG00000111145	protein_coding	Hnrnpu	ENSMUST00000214653	nonsense_mediated_decay		CHR_MG4281_PATCH	-1	178330620	511
ENSMUSG00000111145	protein_coding	Hnrnpu	ENSMUST00000216715	nonsense_mediated_decay		CHR_MG4281_PATCH	-1	178329406	351
ENSMUSG00000111145	protein_coding	Hnrnpu	ENSMUST00000216820	protein_coding		CHR_MG4281_PATCH	-1	178337796	7640
ENSMUSG00000111145	protein_coding	Hnrnpu	ENSMUST00000215444	retained_intron		CHR_MG4281_PATCH	-1	178330319	710
ENSMUSG00000111145	protein_coding	Hnrnpu	ENSMUST00000216050	retained_intron		CHR_MG4281_PATCH	-1	178332925	923
ENSMUSG00000111145	protein_coding	Hnrnpu	ENSMUST00000214701	processed_transcript		CHR_MG4281_PATCH	-1	178334545	869
ENSMUSG00000111145	protein_coding	Hnrnpu	ENSMUST00000213664	retained_intron		CHR_MG4281_PATCH	-1	178336404	673
ENSMUSG00000111220	protein_coding	Kif11	ENSMUST00000216689	protein_coding		CHR_MG65_PATCH	1	37387452	4819
ENSMUSG00000111220	protein_coding	Kif11	ENSMUST00000235319	retained_intron		CHR_MG65_PATCH	1	37413230	3127
ENSMUSG00000111279	protein_coding	Gm10519	ENSMUST00000216120	protein_coding		CHR_MG4281_PATCH	-1	178187533	312
ENSMUSG00000111279	protein_coding	Gm10519	ENSMUST00000230154	protein_coding		CHR_MG4281_PATCH	-1	178187533	312
ENSMUSG00000111314	protein_coding	Hhex	ENSMUST00000237561	retained_intron		CHR_MG65_PATCH	1	37445859	3908
ENSMUSG00000111314	protein_coding	Hhex	ENSMUST00000213879	protein_coding		CHR_MG65_PATCH	1	37445859	1802
ENSMUSG00000111314	protein_coding	Hhex	ENSMUST00000213537	protein_coding		CHR_MG65_PATCH	1	37447788	1435
ENSMUSG00000111328	protein_coding	AC139209.1	ENSMUST00000213567	protein_coding		CHR_MG4288_PATCH	-1	9139711	1266
ENSMUSG00000111328	protein_coding	AC139209.1	ENSMUST00000230506	protein_coding		CHR_MG4288_PATCH	-1	9139711	1266
ENSMUSG00000111332	TEC	Gm38345	ENSMUST00000216507	TEC		CHR_MG65_PATCH	-1	37445705	1748
ENSMUSG00000111408	lncRNA	B230369F24Rik	ENSMUST00000216509	lncRNA		CHR_MG4281_PATCH	-1	178318548	2560
ENSMUSG00000111522	protein_coding	Desi2	ENSMUST00000214926	protein_coding		CHR_MG4281_PATCH	1	178187417	2590
ENSMUSG00000111522	protein_coding	Desi2	ENSMUST00000215145	protein_coding		CHR_MG4281_PATCH	1	178187532	8802
ENSMUSG00000111522	protein_coding	Desi2	ENSMUST00000213501	protein_coding		CHR_MG4281_PATCH	1	178187847	690
ENSMUSG00000111522	protein_coding	Desi2	ENSMUST00000215805	protein_coding		CHR_MG4281_PATCH	1	178256103	1193
ENSMUSG00000111527	protein_coding	Nadk2	ENSMUST00000213299	protein_coding		CHR_MG4288_PATCH	1	9071501	1356
ENSMUSG00000111527	protein_coding	Nadk2	ENSMUST00000217358	protein_coding		CHR_MG4288_PATCH	1	9071501	1206
ENSMUSG00000111527	protein_coding	Nadk2	ENSMUST00000229949	protein_coding		CHR_MG4288_PATCH	1	9071501	1356
ENSMUSG00000111527	protein_coding	Nadk2	ENSMUST00000229627	protein_coding		CHR_MG4288_PATCH	1	9071501	1206
ENSMUSG00000111599	snRNA	Gm25268	ENSMUST00000213671	snRNA		CHR_MG65_PATCH	-1	37233484	103
ENSMUSG00000111603	protein_coding	Gm9919	ENSMUST00000214966	protein_coding		CHR_MG4264_PATCH	-1	58278765	297
ENSMUSG00000111603	protein_coding	Gm9919	ENSMUST00000230145	protein_coding		CHR_MG4264_PATCH	-1	58278765	297
ENSMUSG00000111624	protein_coding	Ide	ENSMUST00000216591	protein_coding		CHR_MG65_PATCH	-1	37330613	4962
ENSMUSG00000111624	protein_coding	Ide	ENSMUST00000214884	processed_transcript		CHR_MG65_PATCH	-1	37307392	2001
ENSMUSG00000111624	protein_coding	Ide	ENSMUST00000215379	retained_intron		CHR_MG65_PATCH	-1	37290878	814
ENSMUSG00000111624	protein_coding	Ide	ENSMUST00000217274	processed_transcript		CHR_MG65_PATCH	-1	37313573	2368
ENSMUSG00000111624	protein_coding	Ide	ENSMUST00000215029	retained_intron		CHR_MG65_PATCH	-1	37337852	1723
ENSMUSG00000111634	processed_pseudogene	Gm37486	ENSMUST00000214439	processed_pseudogene		CHR_MG4281_PATCH	1	178299395	405
ENSMUSG00000111653	processed_pseudogene	Gm8023	ENSMUST00000214982	processed_pseudogene		CHR_MG4281_PATCH	1	178266204	903
ENSMUSG00000111676	TEC	Gm38300	ENSMUST00000214363	TEC		CHR_MG4281_PATCH	1	178339600	1870
ENSMUSG00000111742	protein_coding	Cox20	ENSMUST00000214032	protein_coding		CHR_MG4281_PATCH	1	178319129	471
ENSMUSG00000111742	protein_coding	Cox20	ENSMUST00000213470	retained_intron		CHR_MG4281_PATCH	1	178319129	670
ENSMUSG00000111860	pseudogene	AC149294.1	ENSMUST00000217191	pseudogene		CHR_MG4259_PATCH	1	3181131	375
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000217142	protein_coding		CHR_MG65_PATCH	-1	37207462	5899
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000214197	protein_coding		CHR_MG65_PATCH	-1	37174095	4811
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000216156	protein_coding		CHR_MG65_PATCH	-1	37176063	5671
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000215794	protein_coding		CHR_MG65_PATCH	-1	37207462	5260
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000213231	protein_coding		CHR_MG65_PATCH	-1	37207473	4224
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000215703	protein_coding		CHR_MG65_PATCH	-1	37207293	3148
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000216186	protein_coding		CHR_MG65_PATCH	-1	37198109	2411
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000214706	protein_coding		CHR_MG65_PATCH	-1	37207508	2095
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000213478	protein_coding		CHR_MG65_PATCH	-1	37178017	659
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000215106	protein_coding		CHR_MG65_PATCH	-1	37176056	557
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000216427	protein_coding		CHR_MG65_PATCH	-1	37208601	665
ENSMUSG00000111861	protein_coding	Cpeb3	ENSMUST00000216087	protein_coding		CHR_MG65_PATCH	-1	37175216	450
ENSMUSG00000115055	processed_pseudogene	Gm9614	ENSMUST00000226665	processed_pseudogene		CHR_MG4259_PATCH	1	3082590	882
ENSMUSG00000115189	processed_pseudogene	Gm49105	ENSMUST00000227596	processed_pseudogene		CHR_MG4261_PATCH	1	38924557	399
ENSMUSG00000115255	lncRNA	Gm49231	ENSMUST00000227622	lncRNA		CHR_MG4259_PATCH	1	3158046	732
ENSMUSG00000115364	lncRNA	Gm49097	ENSMUST00000227907	lncRNA		CHR_MG4261_PATCH	-1	38801773	3815
ENSMUSG00000115442	processed_pseudogene	Gm49232	ENSMUST00000228088	processed_pseudogene		CHR_MG4259_PATCH	1	3207189	1432
ENSMUSG00000115496	lncRNA	Gm49786	ENSMUST00000226381	lncRNA		CHR_MG4261_PATCH	1	38903583	851
ENSMUSG00000115583	unprocessed_pseudogene	Gm8139	ENSMUST00000227926	unprocessed_pseudogene		CHR_MG4288_PATCH	-1	9261332	1208
ENSMUSG00000115655	processed_pseudogene	Gm49222	ENSMUST00000226847	processed_pseudogene		CHR_MG4259_PATCH	1	3145091	164
ENSMUSG00000115753	processed_pseudogene	Gm4740	ENSMUST00000228602	processed_pseudogene		CHR_MG4261_PATCH	1	38853385	1774
ENSMUSG00000115853	protein_coding	LO018689.1	ENSMUST00000230819	protein_coding		CHR_MG4310_MG4311_PATCH	1	146314137	1719
ENSMUSG00000115853	protein_coding	LO018689.1	ENSMUST00000231113	protein_coding		CHR_MG4310_MG4311_PATCH	1	146314137	1719
ENSMUSG00000115857	protein_coding	Zfp992	ENSMUST00000229941	protein_coding		CHR_MG4310_MG4311_PATCH	1	146596910	4550
ENSMUSG00000115872	processed_pseudogene	Gm13169	ENSMUST00000229703	processed_pseudogene		CHR_MG4310_MG4311_PATCH	1	146239954	1459
ENSMUSG00000115891	pseudogene	AL607107.1	ENSMUST00000230649	pseudogene		CHR_MG4308_PATCH	1	7861435	375
ENSMUSG00000115901	pseudogene	AL646044.1	ENSMUST00000229180	pseudogene		CHR_MG4308_PATCH	1	7618628	375
ENSMUSG00000115905	protein_coding	Kazn	ENSMUST00000229701	protein_coding		CHR_MG51_PATCH	-1	142210206	4499
ENSMUSG00000115905	protein_coding	Kazn	ENSMUST00000229099	processed_transcript		CHR_MG51_PATCH	-1	142118111	241
ENSMUSG00000115905	protein_coding	Kazn	ENSMUST00000230358	protein_coding		CHR_MG51_PATCH	-1	142159054	726
ENSMUSG00000115905	protein_coding	Kazn	ENSMUST00000231004	protein_coding		CHR_MG51_PATCH	-1	142239401	3843
ENSMUSG00000115905	protein_coding	Kazn	ENSMUST00000229036	protein_coding		CHR_MG51_PATCH	-1	142210108	3323
ENSMUSG00000115905	protein_coding	Kazn	ENSMUST00000229082	retained_intron		CHR_MG51_PATCH	-1	142146465	5725
ENSMUSG00000115905	protein_coding	Kazn	ENSMUST00000231117	protein_coding		CHR_MG51_PATCH	-1	142210206	1858
ENSMUSG00000115905	protein_coding	Kazn	ENSMUST00000230630	protein_coding		CHR_MG51_PATCH	-1	142210206	1128
ENSMUSG00000115905	protein_coding	Kazn	ENSMUST00000229128	retained_intron		CHR_MG51_PATCH	-1	142154586	723
ENSMUSG00000115909	pseudogene	LO018689.2	ENSMUST00000231072	pseudogene		CHR_MG4310_MG4311_PATCH	1	146399268	549
ENSMUSG00000115945	protein_coding	Zfp600	ENSMUST00000229375	retained_intron		CHR_MG4310_MG4311_PATCH	1	146156824	724
ENSMUSG00000115945	protein_coding	Zfp600	ENSMUST00000229759	protein_coding		CHR_MG4310_MG4311_PATCH	1	146157690	4154
ENSMUSG00000115945	protein_coding	Zfp600	ENSMUST00000230902	protein_coding		CHR_MG4310_MG4311_PATCH	1	146161909	569
ENSMUSG00000115945	protein_coding	Zfp600	ENSMUST00000230147	protein_coding		CHR_MG4310_MG4311_PATCH	1	146156824	4244
ENSMUSG00000115947	lncRNA	Tmem51os1	ENSMUST00000230917	lncRNA		CHR_MG51_PATCH	1	142083972	3440
ENSMUSG00000115947	lncRNA	Tmem51os1	ENSMUST00000230140	lncRNA		CHR_MG51_PATCH	1	142084298	2131
ENSMUSG00000115947	lncRNA	Tmem51os1	ENSMUST00000230826	lncRNA		CHR_MG51_PATCH	1	142084340	1667
ENSMUSG00000115947	lncRNA	Tmem51os1	ENSMUST00000229661	lncRNA		CHR_MG51_PATCH	1	142084856	675
ENSMUSG00000115981	pseudogene	AC119928.2	ENSMUST00000231162	pseudogene		CHR_MG4281_PATCH	1	178174699	1677
ENSMUSG00000115984	lncRNA	2310043O21Rik	ENSMUST00000230940	lncRNA		CHR_MG4261_PATCH	-1	38594934	622
ENSMUSG00000116002	protein_coding	6330411D24Rik	ENSMUST00000229150	processed_transcript		CHR_MG51_PATCH	-1	143074098	1568
ENSMUSG00000116002	protein_coding	6330411D24Rik	ENSMUST00000239153	protein_coding		CHR_MG51_PATCH	-1	143073025	249
ENSMUSG00000116003	pseudogene	LO018689.3	ENSMUST00000229382	pseudogene		CHR_MG4310_MG4311_PATCH	-1	146333631	309
ENSMUSG00000116005	protein_coding	LO018689.4	ENSMUST00000230087	protein_coding		CHR_MG4310_MG4311_PATCH	1	146447831	1899
ENSMUSG00000116005	protein_coding	LO018689.4	ENSMUST00000229444	protein_coding		CHR_MG4310_MG4311_PATCH	1	146447831	1899
ENSMUSG00000116054	lncRNA	Gm45924	ENSMUST00000229887	lncRNA		CHR_MG4261_PATCH	-1	38728516	2766
ENSMUSG00000116101	pseudogene	AL607107.2	ENSMUST00000228996	pseudogene		CHR_MG4308_PATCH	1	7858831	159
ENSMUSG00000116142	protein_coding	LO018689.5	ENSMUST00000229719	protein_coding		CHR_MG4310_MG4311_PATCH	-1	146404736	342
ENSMUSG00000116142	protein_coding	LO018689.5	ENSMUST00000229602	protein_coding		CHR_MG4310_MG4311_PATCH	-1	146404736	342
ENSMUSG00000116181	protein_coding	Fhad1	ENSMUST00000231201	protein_coding		CHR_MG51_PATCH	-1	142015067	4809
ENSMUSG00000116181	protein_coding	Fhad1	ENSMUST00000229123	protein_coding		CHR_MG51_PATCH	-1	142011637	4263
ENSMUSG00000116181	protein_coding	Fhad1	ENSMUST00000229745	processed_transcript		CHR_MG51_PATCH	-1	141922426	865
ENSMUSG00000116181	protein_coding	Fhad1	ENSMUST00000230228	protein_coding		CHR_MG51_PATCH	-1	141933089	1366
ENSMUSG00000116181	protein_coding	Fhad1	ENSMUST00000230428	processed_transcript		CHR_MG51_PATCH	-1	141952076	838
ENSMUSG00000116181	protein_coding	Fhad1	ENSMUST00000228982	processed_transcript		CHR_MG51_PATCH	-1	141954194	676
ENSMUSG00000116181	protein_coding	Fhad1	ENSMUST00000230752	retained_intron		CHR_MG51_PATCH	-1	142015082	2224
ENSMUSG00000116181	protein_coding	Fhad1	ENSMUST00000230675	processed_transcript		CHR_MG51_PATCH	-1	142015039	241
ENSMUSG00000116196	lncRNA	Gm13062	ENSMUST00000229226	lncRNA		CHR_MG51_PATCH	1	142180602	562
ENSMUSG00000116232	protein_coding	Zfp987	ENSMUST00000229483	processed_transcript		CHR_MG4310_MG4311_PATCH	1	146097298	266
ENSMUSG00000116232	protein_coding	Zfp987	ENSMUST00000230398	protein_coding		CHR_MG4310_MG4311_PATCH	1	146097312	410
ENSMUSG00000116232	protein_coding	Zfp987	ENSMUST00000229996	protein_coding		CHR_MG4310_MG4311_PATCH	1	146097345	2798
ENSMUSG00000116236	protein_coding	Lmbrd2	ENSMUST00000230318	protein_coding		CHR_MG4288_PATCH	1	9149038	2082
ENSMUSG00000116236	protein_coding	Lmbrd2	ENSMUST00000230900	protein_coding		CHR_MG4288_PATCH	1	9149038	2082
ENSMUSG00000116259	processed_pseudogene	Gm13168	ENSMUST00000229844	processed_pseudogene		CHR_MG4310_MG4311_PATCH	1	146263559	632
ENSMUSG00000116281	lncRNA	1100001I12Rik	ENSMUST00000230407	lncRNA		CHR_MG4261_PATCH	-1	38659839	672
ENSMUSG00000116282	lncRNA	Gm13165	ENSMUST00000229142	lncRNA		CHR_MG4310_MG4311_PATCH	-1	146205357	383
ENSMUSG00000116282	lncRNA	Gm13165	ENSMUST00000229221	lncRNA		CHR_MG4310_MG4311_PATCH	-1	146205732	252
ENSMUSG00000116302	processed_pseudogene	Gm13167	ENSMUST00000230152	processed_pseudogene		CHR_MG4310_MG4311_PATCH	-1	146224613	578
ENSMUSG00000116320	protein_coding	LO018689.6	ENSMUST00000229749	protein_coding		CHR_MG4310_MG4311_PATCH	1	146376372	402
ENSMUSG00000116320	protein_coding	LO018689.6	ENSMUST00000230888	protein_coding		CHR_MG4310_MG4311_PATCH	1	146376372	402
ENSMUSG00000116337	pseudogene	LO018689.7	ENSMUST00000230857	pseudogene		CHR_MG4310_MG4311_PATCH	1	146390635	456
ENSMUSG00000116359	protein_coding	LO018689.8	ENSMUST00000230089	protein_coding		CHR_MG4310_MG4311_PATCH	1	146326441	459
ENSMUSG00000116359	protein_coding	LO018689.8	ENSMUST00000230331	protein_coding		CHR_MG4310_MG4311_PATCH	1	146326441	459
ENSMUSG00000116387	protein_coding	Fam83a	ENSMUST00000231033	protein_coding		CHR_MG74_PATCH	1	57985419	2876
ENSMUSG00000116387	protein_coding	Fam83a	ENSMUST00000230727	protein_coding		CHR_MG74_PATCH	1	57985910	1189
ENSMUSG00000116387	protein_coding	Fam83a	ENSMUST00000229778	processed_transcript		CHR_MG74_PATCH	1	58002146	529
ENSMUSG00000116394	protein_coding	Atp6v1c1	ENSMUST00000229037	protein_coding		CHR_MG4261_PATCH	1	38661933	2071
ENSMUSG00000116394	protein_coding	Atp6v1c1	ENSMUST00000230930	processed_transcript		CHR_MG4261_PATCH	1	38661944	390
ENSMUSG00000116394	protein_coding	Atp6v1c1	ENSMUST00000229983	retained_intron		CHR_MG4261_PATCH	1	38661944	4927
ENSMUSG00000116394	protein_coding	Atp6v1c1	ENSMUST00000230346	protein_coding		CHR_MG4261_PATCH	1	38661976	373
ENSMUSG00000116394	protein_coding	Atp6v1c1	ENSMUST00000231175	retained_intron		CHR_MG4261_PATCH	1	38661984	506
ENSMUSG00000116394	protein_coding	Atp6v1c1	ENSMUST00000230180	nonsense_mediated_decay		CHR_MG4261_PATCH	1	38661988	728
ENSMUSG00000116394	protein_coding	Atp6v1c1	ENSMUST00000231217	retained_intron		CHR_MG4261_PATCH	1	38675689	569
ENSMUSG00000116421	unprocessed_pseudogene	Vmn2r-ps17	ENSMUST00000230354	unprocessed_pseudogene		CHR_MG4310_MG4311_PATCH	1	146264521	375
ENSMUSG00000116447	lncRNA	Gm13052	ENSMUST00000231017	lncRNA		CHR_MG51_PATCH	-1	142346475	769
ENSMUSG00000116457	processed_pseudogene	Gm13170	ENSMUST00000230921	processed_pseudogene		CHR_MG4310_MG4311_PATCH	1	146178124	643
ENSMUSG00000116465	protein_coding	Tmem51	ENSMUST00000229582	protein_coding		CHR_MG51_PATCH	-1	142084304	1875
ENSMUSG00000116474	pseudogene	AL646044.2	ENSMUST00000228964	pseudogene		CHR_MG4308_PATCH	-1	7582280	1644
ENSMUSG00000116484	lncRNA	4930455G09Rik	ENSMUST00000230692	lncRNA		CHR_MG51_PATCH	1	142017898	630
ENSMUSG00000116487	lncRNA	Gm13166	ENSMUST00000230527	lncRNA		CHR_MG4310_MG4311_PATCH	1	146251829	940
ENSMUSG00000116487	lncRNA	Gm13166	ENSMUST00000230758	lncRNA		CHR_MG4310_MG4311_PATCH	1	146252173	280
ENSMUSG00000116487	lncRNA	Gm13166	ENSMUST00000231115	lncRNA		CHR_MG4310_MG4311_PATCH	1	146270331	314
ENSMUSG00000116487	lncRNA	Gm13166	ENSMUST00000229527	lncRNA		CHR_MG4310_MG4311_PATCH	1	146270331	326
ENSMUSG00000116487	lncRNA	Gm13166	ENSMUST00000230499	lncRNA		CHR_MG4310_MG4311_PATCH	1	146270372	282
ENSMUSG00000116724	lncRNA	Gm26704	ENSMUST00000231368	lncRNA		CHR_MG4261_PATCH	-1	38869336	2901
ENSMUSG00000116844	lncRNA	Gm13053	ENSMUST00000232038	lncRNA		CHR_MG51_PATCH	-1	142048578	459
ENSMUSG00000117672	lncRNA	1700122C19Rik	ENSMUST00000237552	retained_intron		CHR_MG65_PATCH	1	37476302	6582
ENSMUSG00000117672	lncRNA	1700122C19Rik	ENSMUST00000236316	lncRNA		CHR_MG65_PATCH	1	37476303	647
ENSMUSG00000118069	processed_pseudogene	Gm8663	ENSMUST00000235316	processed_pseudogene		CHR_MG65_PATCH	1	37399456	946
ENSMUSG00000102161	processed_pseudogene	Gm11582	ENSMUST00000193308	processed_pseudogene		CHR_MMCHR1_CHORI29_IDD5_1	-1	60982012	236
ENSMUSG00000102412	protein_coding	Cd28	ENSMUST00000193720	protein_coding		CHR_MMCHR1_CHORI29_IDD5_1	1	60761818	603
ENSMUSG00000102412	protein_coding	Cd28	ENSMUST00000229040	protein_coding		CHR_MMCHR1_CHORI29_IDD5_1	1	60761818	603
ENSMUSG00000102944	processed_pseudogene	Gm11609	ENSMUST00000194769	processed_pseudogene		CHR_MMCHR1_CHORI29_IDD5_1	1	60798202	793
ENSMUSG00000103068	protein_coding	CR936839.1	ENSMUST00000194492	protein_coding		CHR_MMCHR1_CHORI29_IDD5_1	1	61027244	636
ENSMUSG00000103068	protein_coding	CR936839.1	ENSMUST00000230833	protein_coding		CHR_MMCHR1_CHORI29_IDD5_1	1	61027244	636
ENSMUSG00000103326	protein_coding	Ctla4	ENSMUST00000192488	protein_coding		CHR_MMCHR1_CHORI29_IDD5_1	1	60935411	1934
ENSMUSG00000103326	protein_coding	Ctla4	ENSMUST00000229636	protein_coding		CHR_MMCHR1_CHORI29_IDD5_1	1	60935411	1824
ENSMUSG00000103326	protein_coding	Ctla4	ENSMUST00000230561	protein_coding		CHR_MMCHR1_CHORI29_IDD5_1	1	60935411	1934
ENSMUSG00000103326	protein_coding	Ctla4	ENSMUST00000230285	protein_coding		CHR_MMCHR1_CHORI29_IDD5_1	1	60935411	1824
ENSMUSG00000103337	processed_pseudogene	Gm11577	ENSMUST00000194423	processed_pseudogene		CHR_MMCHR1_CHORI29_IDD5_1	1	60700871	737
ENSMUSG00000103582	processed_pseudogene	Gm11581	ENSMUST00000195632	processed_pseudogene		CHR_MMCHR1_CHORI29_IDD5_1	1	60814813	763
ENSMUSG00000103687	lncRNA	Gm11579	ENSMUST00000195076	lncRNA		CHR_MMCHR1_CHORI29_IDD5_1	-1	60787527	845
ENSMUSG00000103806	processed_pseudogene	Rpl17-ps1	ENSMUST00000194282	processed_pseudogene		CHR_MMCHR1_CHORI29_IDD5_1	1	61109989	552
ENSMUSG00000104421	processed_pseudogene	Rpl18-ps1	ENSMUST00000194037	processed_pseudogene		CHR_MMCHR1_CHORI29_IDD5_1	1	60927315	525
ENSMUSG00000110933	pseudogene	CR936839.2	ENSMUST00000215558	pseudogene		CHR_MMCHR1_CHORI29_IDD5_1	1	60946891	375
ENSMUSG00000111848	pseudogene	CR936842.1	ENSMUST00000214992	pseudogene		CHR_MMCHR1_CHORI29_IDD5_1	1	60707406	375
ENSMUSG00000111855	pseudogene	CR936839.3	ENSMUST00000215992	pseudogene		CHR_MMCHR1_CHORI29_IDD5_1	1	60952421	609
ENSMUSG00000115874	lncRNA	Slfn5os	ENSMUST00000229274	lncRNA		CHR_WSB_EIJ_MMCHR11_CTG3	-1	82960972	574
ENSMUSG00000115874	lncRNA	Slfn5os	ENSMUST00000229059	lncRNA		CHR_WSB_EIJ_MMCHR11_CTG3	-1	82960917	550
ENSMUSG00000115883	protein_coding	Slfn10-ps	ENSMUST00000231022	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83035780	2724
ENSMUSG00000115883	protein_coding	Slfn10-ps	ENSMUST00000229326	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83035780	2724
ENSMUSG00000115886	protein_coding	Tgtp2	ENSMUST00000229815	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	49002781	1245
ENSMUSG00000115886	protein_coding	Tgtp2	ENSMUST00000229241	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	49002781	1245
ENSMUSG00000115913	protein_coding	Slfn1	ENSMUST00000230356	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	83102051	1864
ENSMUSG00000115939	protein_coding	Olfr1396	ENSMUST00000229378	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	49027626	978
ENSMUSG00000115939	protein_coding	Olfr1396	ENSMUST00000230497	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	49027626	978
ENSMUSG00000115941	protein_coding	Slfn3	ENSMUST00000229192	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	83141602	1816
ENSMUSG00000115941	protein_coding	Slfn3	ENSMUST00000229117	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	83141605	1966
ENSMUSG00000115941	protein_coding	Slfn3	ENSMUST00000229716	processed_transcript		CHR_PWK_PHJ_MMCHR11_CTG3	1	83158889	2834
ENSMUSG00000115950	lncRNA	Gm48462	ENSMUST00000229149	lncRNA		CHR_PWK_PHJ_MMCHR11_CTG3	1	83079426	358
ENSMUSG00000115951	protein_coding	Hspa4l	ENSMUST00000230680	protein_coding		CHR_MG89_PATCH	1	40645663	1949
ENSMUSG00000115951	protein_coding	Hspa4l	ENSMUST00000230348	protein_coding		CHR_MG89_PATCH	1	40645711	9479
ENSMUSG00000115951	protein_coding	Hspa4l	ENSMUST00000231135	protein_coding		CHR_MG89_PATCH	1	40645765	669
ENSMUSG00000115951	protein_coding	Hspa4l	ENSMUST00000229455	retained_intron		CHR_MG89_PATCH	1	40645864	1997
ENSMUSG00000115951	protein_coding	Hspa4l	ENSMUST00000229561	protein_coding		CHR_MG89_PATCH	1	40646149	2744
ENSMUSG00000115951	protein_coding	Hspa4l	ENSMUST00000229237	retained_intron		CHR_MG89_PATCH	1	40672925	480
ENSMUSG00000115951	protein_coding	Hspa4l	ENSMUST00000230789	retained_intron		CHR_MG89_PATCH	1	40684291	670
ENSMUSG00000115954	protein_coding	Slfn2	ENSMUST00000228966	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	83057332	1134
ENSMUSG00000115954	protein_coding	Slfn2	ENSMUST00000229820	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	83057332	1134
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000230545	protein_coding		CHR_MG89_PATCH	1	40747251	2492
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000230435	protein_coding		CHR_MG89_PATCH	1	40794426	4455
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000230666	protein_coding		CHR_MG89_PATCH	1	40794544	588
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000230200	nonsense_mediated_decay		CHR_MG89_PATCH	1	40794558	4144
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000230188	nonsense_mediated_decay		CHR_MG89_PATCH	1	40794570	623
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000230231	protein_coding		CHR_MG89_PATCH	1	40794587	797
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000229105	protein_coding		CHR_MG89_PATCH	1	40794603	3277
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000230375	nonsense_mediated_decay		CHR_MG89_PATCH	1	40794605	3393
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000230291	protein_coding		CHR_MG89_PATCH	1	40794626	1021
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000230950	retained_intron		CHR_MG89_PATCH	1	40812965	6365
ENSMUSG00000115963	protein_coding	Abhd18	ENSMUST00000229186	processed_transcript		CHR_MG89_PATCH	1	40830826	2080
ENSMUSG00000115966	protein_coding	LT629151.1	ENSMUST00000229422	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	83258411	597
ENSMUSG00000115966	protein_coding	LT629151.1	ENSMUST00000230809	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	83258411	597
ENSMUSG00000115967	protein_coding	LT629153.1	ENSMUST00000231092	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG2	-1	71324170	3324
ENSMUSG00000115967	protein_coding	LT629153.1	ENSMUST00000230480	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG2	-1	71324170	3324
ENSMUSG00000115990	unprocessed_pseudogene	Gm12187	ENSMUST00000230275	unprocessed_pseudogene		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48983445	1375
ENSMUSG00000115998	processed_pseudogene	Gm48490	ENSMUST00000231023	processed_pseudogene		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83121981	94
ENSMUSG00000116012	protein_coding	LT629153.2	ENSMUST00000229558	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG2	-1	71255542	825
ENSMUSG00000116012	protein_coding	LT629153.2	ENSMUST00000230813	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG2	-1	71255542	825
ENSMUSG00000116019	pseudogene	LT629152.1	ENSMUST00000230519	pseudogene		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48938424	1254
ENSMUSG00000116020	snRNA	Gm23444	ENSMUST00000229070	snRNA		CHR_PWK_PHJ_MMCHR11_CTG3	1	83221014	191
ENSMUSG00000116032	protein_coding	Gm5431	ENSMUST00000231169	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48895409	2532
ENSMUSG00000116032	protein_coding	Gm5431	ENSMUST00000230095	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48895409	2532
ENSMUSG00000116043	protein_coding	LT629151.2	ENSMUST00000230051	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	82988585	2730
ENSMUSG00000116043	protein_coding	LT629151.2	ENSMUST00000229563	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	82988585	2730
ENSMUSG00000116047	protein_coding	Gm5431	ENSMUST00000229519	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48898836	2532
ENSMUSG00000116047	protein_coding	Gm5431	ENSMUST00000230777	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48898836	2532
ENSMUSG00000116053	protein_coding	Atad2	ENSMUST00000229743	retained_intron		CHR_MG74_PATCH	-1	58098776	2209
ENSMUSG00000116053	protein_coding	Atad2	ENSMUST00000229333	protein_coding		CHR_MG74_PATCH	-1	58135082	5684
ENSMUSG00000116053	protein_coding	Atad2	ENSMUST00000230970	protein_coding		CHR_MG74_PATCH	-1	58119315	3472
ENSMUSG00000116053	protein_coding	Atad2	ENSMUST00000230241	retained_intron		CHR_MG74_PATCH	-1	58111343	2934
ENSMUSG00000116053	protein_coding	Atad2	ENSMUST00000229485	retained_intron		CHR_MG74_PATCH	-1	58112158	2826
ENSMUSG00000116053	protein_coding	Atad2	ENSMUST00000229016	retained_intron		CHR_MG74_PATCH	-1	58118811	2664
ENSMUSG00000116053	protein_coding	Atad2	ENSMUST00000230578	retained_intron		CHR_MG74_PATCH	-1	58129011	2047
ENSMUSG00000116053	protein_coding	Atad2	ENSMUST00000230827	retained_intron		CHR_MG74_PATCH	-1	58133292	2141
ENSMUSG00000116055	protein_coding	LT629154.1	ENSMUST00000230920	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	1	82956583	2652
ENSMUSG00000116055	protein_coding	LT629154.1	ENSMUST00000230327	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	1	82956583	2652
ENSMUSG00000116062	protein_coding	LT629151.3	ENSMUST00000231178	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83248447	1077
ENSMUSG00000116062	protein_coding	LT629151.3	ENSMUST00000230821	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83248447	1077
ENSMUSG00000116065	lncRNA	Slfn5os	ENSMUST00000229146	lncRNA		CHR_PWK_PHJ_MMCHR11_CTG3	-1	82960655	574
ENSMUSG00000116065	lncRNA	Slfn5os	ENSMUST00000229753	lncRNA		CHR_PWK_PHJ_MMCHR11_CTG3	-1	82960600	550
ENSMUSG00000116073	protein_coding	LT629150.1	ENSMUST00000230543	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG2	-1	71219063	3531
ENSMUSG00000116073	protein_coding	LT629150.1	ENSMUST00000229407	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG2	-1	71219063	3531
ENSMUSG00000116076	protein_coding	Fbxo32	ENSMUST00000230488	protein_coding		CHR_MG74_PATCH	-1	58214932	6976
ENSMUSG00000116094	protein_coding	9130401M01Rik	ENSMUST00000229646	protein_coding		CHR_MG74_PATCH	-1	58034315	1341
ENSMUSG00000116094	protein_coding	9130401M01Rik	ENSMUST00000230458	processed_transcript		CHR_MG74_PATCH	-1	58027895	1672
ENSMUSG00000116094	protein_coding	9130401M01Rik	ENSMUST00000230841	nonsense_mediated_decay		CHR_MG74_PATCH	-1	58034190	649
ENSMUSG00000116094	protein_coding	9130401M01Rik	ENSMUST00000229699	protein_coding		CHR_MG74_PATCH	-1	58034325	387
ENSMUSG00000116100	protein_coding	Gm29394	ENSMUST00000230055	protein_coding		CHR_MG74_PATCH	-1	58076425	1326
ENSMUSG00000116100	protein_coding	Gm29394	ENSMUST00000230606	protein_coding		CHR_MG74_PATCH	-1	58076207	400
ENSMUSG00000116100	protein_coding	Gm29394	ENSMUST00000229419	protein_coding		CHR_MG74_PATCH	-1	58076183	448
ENSMUSG00000116100	protein_coding	Gm29394	ENSMUST00000231202	protein_coding		CHR_MG74_PATCH	-1	58076206	281
ENSMUSG00000116112	protein_coding	LT629152.2	ENSMUST00000230457	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48982836	2532
ENSMUSG00000116112	protein_coding	LT629152.2	ENSMUST00000231210	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48982836	2532
ENSMUSG00000116135	protein_coding	Wdyhv1	ENSMUST00000229210	protein_coding		CHR_MG74_PATCH	1	58141377	1383
ENSMUSG00000116135	protein_coding	Wdyhv1	ENSMUST00000229690	nonsense_mediated_decay		CHR_MG74_PATCH	1	58141392	798
ENSMUSG00000116135	protein_coding	Wdyhv1	ENSMUST00000229857	protein_coding		CHR_MG74_PATCH	1	58141408	786
ENSMUSG00000116135	protein_coding	Wdyhv1	ENSMUST00000230621	protein_coding		CHR_MG74_PATCH	1	58141411	1094
ENSMUSG00000116135	protein_coding	Wdyhv1	ENSMUST00000231157	retained_intron		CHR_MG74_PATCH	1	58141418	747
ENSMUSG00000116135	protein_coding	Wdyhv1	ENSMUST00000229910	protein_coding		CHR_MG74_PATCH	1	58141437	394
ENSMUSG00000116135	protein_coding	Wdyhv1	ENSMUST00000229497	retained_intron		CHR_MG74_PATCH	1	58141554	543
ENSMUSG00000116135	protein_coding	Wdyhv1	ENSMUST00000230052	processed_transcript		CHR_MG74_PATCH	1	58148333	379
ENSMUSG00000116135	protein_coding	Wdyhv1	ENSMUST00000230379	retained_intron		CHR_MG74_PATCH	1	58153179	574
ENSMUSG00000116137	lncRNA	Gm15943	ENSMUST00000229302	lncRNA		CHR_MG74_PATCH	1	58214475	3821
ENSMUSG00000116147	pseudogene	LT629149.1	ENSMUST00000229720	pseudogene		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48950695	1242
ENSMUSG00000116159	pseudogene	LT629152.3	ENSMUST00000229133	pseudogene		CHR_WSB_EIJ_MMCHR11_CTG1	-1	49031575	306
ENSMUSG00000116163	snRNA	Gm23475	ENSMUST00000230870	snRNA		CHR_MG74_PATCH	-1	58143269	62
ENSMUSG00000116169	protein_coding	Mfsd8	ENSMUST00000229555	protein_coding		CHR_MG89_PATCH	-1	40747166	3151
ENSMUSG00000116169	protein_coding	Mfsd8	ENSMUST00000229096	nonsense_mediated_decay		CHR_MG89_PATCH	-1	40747083	1314
ENSMUSG00000116169	protein_coding	Mfsd8	ENSMUST00000230090	nonsense_mediated_decay		CHR_MG89_PATCH	-1	40746975	692
ENSMUSG00000116169	protein_coding	Mfsd8	ENSMUST00000230186	retained_intron		CHR_MG89_PATCH	-1	40731247	3515
ENSMUSG00000116169	protein_coding	Mfsd8	ENSMUST00000230390	protein_coding		CHR_MG89_PATCH	-1	40746815	802
ENSMUSG00000116169	protein_coding	Mfsd8	ENSMUST00000230199	protein_coding		CHR_MG89_PATCH	-1	40747097	220
ENSMUSG00000116169	protein_coding	Mfsd8	ENSMUST00000229425	retained_intron		CHR_MG89_PATCH	-1	40747167	3045
ENSMUSG00000116186	snoRNA	Gm22299	ENSMUST00000230128	snoRNA		CHR_MG74_PATCH	-1	58041651	136
ENSMUSG00000116209	protein_coding	Olfr1396	ENSMUST00000229626	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	49056791	978
ENSMUSG00000116209	protein_coding	Olfr1396	ENSMUST00000230553	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	49056791	978
ENSMUSG00000116211	miRNA	Gm27598	ENSMUST00000230251	miRNA		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83032317	63
ENSMUSG00000116216	lncRNA	Gm2675	ENSMUST00000231114	lncRNA		CHR_MG74_PATCH	1	58414273	1390
ENSMUSG00000116218	protein_coding	Slc25a31	ENSMUST00000230518	protein_coding		CHR_MG89_PATCH	1	40609136	2128
ENSMUSG00000116228	protein_coding	LT629149.2	ENSMUST00000230019	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48909246	429
ENSMUSG00000116228	protein_coding	LT629149.2	ENSMUST00000230421	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48909246	429
ENSMUSG00000116248	miRNA	Mir7679	ENSMUST00000230829	miRNA		CHR_WSB_EIJ_MMCHR11_CTG3	-1	82985514	63
ENSMUSG00000116261	miRNA	Gm23810	ENSMUST00000230396	miRNA		CHR_MG89_PATCH	1	40518818	74
ENSMUSG00000116267	protein_coding	LT629151.4	ENSMUST00000229325	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	82956266	2652
ENSMUSG00000116267	protein_coding	LT629151.4	ENSMUST00000231206	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	82956266	2652
ENSMUSG00000116271	protein_coding	Fer1l6	ENSMUST00000230503	protein_coding		CHR_MG74_PATCH	1	58518497	5714
ENSMUSG00000116271	protein_coding	Fer1l6	ENSMUST00000230168	processed_transcript		CHR_MG74_PATCH	1	58646954	714
ENSMUSG00000116271	protein_coding	Fer1l6	ENSMUST00000230010	retained_intron		CHR_MG74_PATCH	1	58656954	2776
ENSMUSG00000116273	pseudogene	LT629151.5	ENSMUST00000229674	pseudogene		CHR_PWK_PHJ_MMCHR11_CTG3	1	83197847	1011
ENSMUSG00000116278	lncRNA	6430590A07Rik	ENSMUST00000229135	lncRNA		CHR_MG89_PATCH	-1	40794404	1032
ENSMUSG00000116278	lncRNA	6430590A07Rik	ENSMUST00000229488	retained_intron		CHR_MG89_PATCH	-1	40794474	3631
ENSMUSG00000116285	protein_coding	Psme2	ENSMUST00000229642	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48961001	717
ENSMUSG00000116285	protein_coding	Psme2	ENSMUST00000230082	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48961001	717
ENSMUSG00000116286	protein_coding	LT629150.2	ENSMUST00000231212	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG2	-1	71143946	3546
ENSMUSG00000116286	protein_coding	LT629150.2	ENSMUST00000230353	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG2	-1	71143946	3546
ENSMUSG00000116293	protein_coding	LT629153.3	ENSMUST00000229051	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG2	-1	71142346	3546
ENSMUSG00000116293	protein_coding	LT629153.3	ENSMUST00000230329	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG2	-1	71142346	3546
ENSMUSG00000116306	pseudogene	AC113292.1	ENSMUST00000229484	pseudogene		CHR_MG74_PATCH	1	58121607	312
ENSMUSG00000116310	protein_coding	1700034I23Rik	ENSMUST00000229623	protein_coding		CHR_MG89_PATCH	-1	40802824	2348
ENSMUSG00000116326	protein_coding	Plk4	ENSMUST00000230182	protein_coding		CHR_MG89_PATCH	1	40700300	3479
ENSMUSG00000116326	protein_coding	Plk4	ENSMUST00000229347	retained_intron		CHR_MG89_PATCH	1	40700309	3403
ENSMUSG00000116326	protein_coding	Plk4	ENSMUST00000229967	retained_intron		CHR_MG89_PATCH	1	40700323	1582
ENSMUSG00000116326	protein_coding	Plk4	ENSMUST00000230296	nonsense_mediated_decay		CHR_MG89_PATCH	1	40700323	3320
ENSMUSG00000116326	protein_coding	Plk4	ENSMUST00000229442	retained_intron		CHR_MG89_PATCH	1	40700331	1599
ENSMUSG00000116326	protein_coding	Plk4	ENSMUST00000229475	protein_coding		CHR_MG89_PATCH	1	40700335	3363
ENSMUSG00000116326	protein_coding	Plk4	ENSMUST00000231193	protein_coding		CHR_MG89_PATCH	1	40700535	2769
ENSMUSG00000116326	protein_coding	Plk4	ENSMUST00000229461	protein_coding		CHR_MG89_PATCH	1	40701062	404
ENSMUSG00000116326	protein_coding	Plk4	ENSMUST00000230080	retained_intron		CHR_MG89_PATCH	1	40701744	505
ENSMUSG00000116326	protein_coding	Plk4	ENSMUST00000230793	protein_coding		CHR_MG89_PATCH	1	40713019	593
ENSMUSG00000116329	pseudogene	LT629151.6	ENSMUST00000229832	pseudogene		CHR_PWK_PHJ_MMCHR11_CTG3	1	83196345	867
ENSMUSG00000116330	protein_coding	Ifi47	ENSMUST00000229542	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	1	49038440	1260
ENSMUSG00000116330	protein_coding	Ifi47	ENSMUST00000229027	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	1	49038440	1260
ENSMUSG00000116332	protein_coding	Klhl38	ENSMUST00000230718	protein_coding		CHR_MG74_PATCH	-1	58324169	2212
ENSMUSG00000116334	protein_coding	Zhx1	ENSMUST00000229420	protein_coding		CHR_MG74_PATCH	-1	58076245	4839
ENSMUSG00000116334	protein_coding	Zhx1	ENSMUST00000229354	protein_coding		CHR_MG74_PATCH	-1	58076489	5212
ENSMUSG00000116334	protein_coding	Zhx1	ENSMUST00000229748	protein_coding		CHR_MG74_PATCH	-1	58076469	4764
ENSMUSG00000116334	protein_coding	Zhx1	ENSMUST00000229790	protein_coding		CHR_MG74_PATCH	-1	58076214	2398
ENSMUSG00000116334	protein_coding	Zhx1	ENSMUST00000230255	retained_intron		CHR_MG74_PATCH	-1	58076363	613
ENSMUSG00000116334	protein_coding	Zhx1	ENSMUST00000229151	retained_intron		CHR_MG74_PATCH	-1	58076541	1155
ENSMUSG00000116344	protein_coding	LT629151.7	ENSMUST00000229760	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83234161	2694
ENSMUSG00000116344	protein_coding	LT629151.7	ENSMUST00000229787	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83234161	2694
ENSMUSG00000116351	protein_coding	Fam91a1	ENSMUST00000231148	protein_coding		CHR_MG74_PATCH	1	58423917	5560
ENSMUSG00000116351	protein_coding	Fam91a1	ENSMUST00000229915	retained_intron		CHR_MG74_PATCH	1	58440709	708
ENSMUSG00000116351	protein_coding	Fam91a1	ENSMUST00000230555	retained_intron		CHR_MG74_PATCH	1	58440946	737
ENSMUSG00000116351	protein_coding	Fam91a1	ENSMUST00000230422	retained_intron		CHR_MG74_PATCH	1	58451182	813
ENSMUSG00000116357	protein_coding	Intu	ENSMUST00000230028	protein_coding		CHR_MG89_PATCH	1	40531286	1589
ENSMUSG00000116357	protein_coding	Intu	ENSMUST00000230501	protein_coding		CHR_MG89_PATCH	1	40540767	6387
ENSMUSG00000116357	protein_coding	Intu	ENSMUST00000229531	protein_coding		CHR_MG89_PATCH	1	40572902	774
ENSMUSG00000116364	processed_pseudogene	Gm16114	ENSMUST00000228969	processed_pseudogene		CHR_MG89_PATCH	-1	40559447	300
ENSMUSG00000116370	protein_coding	LT629151.8	ENSMUST00000229350	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83004053	768
ENSMUSG00000116370	protein_coding	LT629151.8	ENSMUST00000230536	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83004053	768
ENSMUSG00000116372	lncRNA	Anxa13	ENSMUST00000238637	lncRNA		CHR_MG74_PATCH	-1	58397832	1595
ENSMUSG00000116372	lncRNA	Anxa13	ENSMUST00000230971	lncRNA		CHR_MG74_PATCH	-1	58397693	1201
ENSMUSG00000116372	lncRNA	Anxa13	ENSMUST00000229342	lncRNA		CHR_MG74_PATCH	-1	58372597	915
ENSMUSG00000116374	protein_coding	Gm12185	ENSMUST00000230378	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48915804	2505
ENSMUSG00000116374	protein_coding	Gm12185	ENSMUST00000229303	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48915804	2505
ENSMUSG00000116390	protein_coding	LT629154.6	ENSMUST00000230486	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	82988750	2730
ENSMUSG00000116390	protein_coding	LT629154.6	ENSMUST00000230101	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	82988750	2730
ENSMUSG00000116393	pseudogene	LT629153.4	ENSMUST00000215188	pseudogene		CHR_WSB_EIJ_MMCHR11_CTG2	-1	71088299	609
ENSMUSG00000116401	protein_coding	LT629151.9	ENSMUST00000230439	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83018078	1203
ENSMUSG00000116401	protein_coding	LT629151.9	ENSMUST00000230178	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	-1	83018078	1203
ENSMUSG00000116408	protein_coding	AL645849.1	ENSMUST00000230581	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	1	48837527	1530
ENSMUSG00000116408	protein_coding	AL645849.1	ENSMUST00000230048	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	1	48837527	1530
ENSMUSG00000116410	lncRNA	1700017G19Rik	ENSMUST00000230650	lncRNA		CHR_MG89_PATCH	-1	40522912	2437
ENSMUSG00000116410	lncRNA	1700017G19Rik	ENSMUST00000229106	lncRNA		CHR_MG89_PATCH	-1	40509774	714
ENSMUSG00000116420	protein_coding	Ifi47	ENSMUST00000229723	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	1	49008581	1260
ENSMUSG00000116420	protein_coding	Ifi47	ENSMUST00000229539	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	1	49008581	1260
ENSMUSG00000116432	transcribed_unprocessed_pseudogene	Gm2011	ENSMUST00000229955	retained_intron		CHR_MG89_PATCH	1	40747101	1263
ENSMUSG00000116432	transcribed_unprocessed_pseudogene	Gm2011	ENSMUST00000229058	processed_transcript		CHR_MG89_PATCH	1	40747283	542
ENSMUSG00000116432	transcribed_unprocessed_pseudogene	Gm2011	ENSMUST00000230453	transcribed_unprocessed_pseudogene		CHR_MG89_PATCH	1	40758137	435
ENSMUSG00000116432	transcribed_unprocessed_pseudogene	Gm2011	ENSMUST00000230966	processed_transcript		CHR_MG89_PATCH	1	40762446	3023
ENSMUSG00000116434	processed_pseudogene	Gm12188	ENSMUST00000230004	processed_pseudogene		CHR_PWK_PHJ_MMCHR11_CTG1	-1	49001259	310
ENSMUSG00000116444	protein_coding	Irgm1	ENSMUST00000229243	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48868587	1227
ENSMUSG00000116444	protein_coding	Irgm1	ENSMUST00000230442	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG1	-1	48868587	1227
ENSMUSG00000116453	protein_coding	LT629151.10	ENSMUST00000229586	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	83135561	1806
ENSMUSG00000116453	protein_coding	LT629151.10	ENSMUST00000230963	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG3	1	83135561	1806
ENSMUSG00000116454	processed_pseudogene	Gm10731	ENSMUST00000230715	processed_pseudogene		CHR_MG89_PATCH	-1	40755404	448
ENSMUSG00000116460	snoRNA	Snord7	ENSMUST00000230840	snoRNA		CHR_PWK_PHJ_MMCHR11_CTG3	1	83244311	97
ENSMUSG00000116463	protein_coding	LT629149.3	ENSMUST00000231143	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48968972	1245
ENSMUSG00000116463	protein_coding	LT629149.3	ENSMUST00000229947	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48968972	1245
ENSMUSG00000116471	protein_coding	LT629149.4	ENSMUST00000230467	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48868608	1227
ENSMUSG00000116471	protein_coding	LT629149.4	ENSMUST00000230784	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48868608	1227
ENSMUSG00000116476	snoRNA	Gm22488	ENSMUST00000229985	snoRNA		CHR_MG74_PATCH	1	58146616	127
ENSMUSG00000116485	miRNA	Mir7679	ENSMUST00000229025	miRNA		CHR_PWK_PHJ_MMCHR11_CTG3	-1	82985349	63
ENSMUSG00000116502	protein_coding	LT629153.5	ENSMUST00000230036	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG2	-1	71206039	3531
ENSMUSG00000116502	protein_coding	LT629153.5	ENSMUST00000230651	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG2	-1	71206039	3531
ENSMUSG00000116503	protein_coding	AL645849.2	ENSMUST00000229179	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	1	48837527	1530
ENSMUSG00000116503	protein_coding	AL645849.2	ENSMUST00000229879	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	1	48837527	1530
ENSMUSG00000116509	processed_pseudogene	Gm44524	ENSMUST00000230440	processed_pseudogene		CHR_MG89_PATCH	-1	40777528	271
ENSMUSG00000116517	TEC	Gm44136	ENSMUST00000229868	TEC		CHR_MG89_PATCH	-1	40765334	1106
ENSMUSG00000116522	pseudogene	LT629153.6	ENSMUST00000231021	pseudogene		CHR_WSB_EIJ_MMCHR11_CTG2	-1	71415251	246
ENSMUSG00000116523	protein_coding	Gm12185	ENSMUST00000230438	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48927840	2505
ENSMUSG00000116523	protein_coding	Gm12185	ENSMUST00000229095	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG1	-1	48927840	2505
ENSMUSG00000116527	protein_coding	LT629150.3	ENSMUST00000230596	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG2	-1	71274632	3588
ENSMUSG00000116527	protein_coding	LT629150.3	ENSMUST00000230047	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG2	-1	71274632	3516
ENSMUSG00000116527	protein_coding	LT629150.3	ENSMUST00000231139	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG2	-1	71274632	3588
ENSMUSG00000116527	protein_coding	LT629150.3	ENSMUST00000230660	protein_coding		CHR_PWK_PHJ_MMCHR11_CTG2	-1	71274632	3516
ENSMUSG00000115873	processed_pseudogene	Gm48434	ENSMUST00000229155	processed_pseudogene		CHR_WSB_EIJ_MMCHR11_CTG3	1	83036827	532
ENSMUSG00000115929	transcribed_unprocessed_pseudogene	Slfn10-ps	ENSMUST00000229329	processed_transcript		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83040480	3621
ENSMUSG00000115929	transcribed_unprocessed_pseudogene	Slfn10-ps	ENSMUST00000230163	transcribed_unprocessed_pseudogene		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83036616	2673
ENSMUSG00000115940	protein_coding	Slfn1	ENSMUST00000230476	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	1	83110897	1864
ENSMUSG00000115953	protein_coding	Slfn8	ENSMUST00000230237	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83018170	2930
ENSMUSG00000115953	protein_coding	Slfn8	ENSMUST00000229469	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83021265	4011
ENSMUSG00000115953	protein_coding	Slfn8	ENSMUST00000229171	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83021177	3083
ENSMUSG00000115953	protein_coding	Slfn8	ENSMUST00000230972	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83021265	3529
ENSMUSG00000115953	protein_coding	Slfn8	ENSMUST00000229364	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83020563	2128
ENSMUSG00000115953	protein_coding	Slfn8	ENSMUST00000230215	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83017635	1252
ENSMUSG00000115991	protein_coding	Slfn2	ENSMUST00000230988	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	1	83059338	1134
ENSMUSG00000115991	protein_coding	Slfn2	ENSMUST00000230326	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	1	83059338	1134
ENSMUSG00000116026	snoRNA	Snord7	ENSMUST00000229924	snoRNA		CHR_WSB_EIJ_MMCHR11_CTG3	1	83252859	97
ENSMUSG00000116106	miRNA	Gm27598	ENSMUST00000230574	miRNA		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83033144	63
ENSMUSG00000116134	protein_coding	LT629154.2	ENSMUST00000230257	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	1	83144420	1806
ENSMUSG00000116134	protein_coding	LT629154.2	ENSMUST00000229789	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	1	83144420	1806
ENSMUSG00000116156	processed_pseudogene	Gm11425	ENSMUST00000229993	processed_pseudogene		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83028451	498
ENSMUSG00000116240	lncRNA	Gm20234	ENSMUST00000229817	lncRNA		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83065293	717
ENSMUSG00000116268	protein_coding	LT629154.3	ENSMUST00000229771	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83256993	1077
ENSMUSG00000116268	protein_coding	LT629154.3	ENSMUST00000230762	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83256993	1077
ENSMUSG00000116269	processed_pseudogene	Gm48490	ENSMUST00000230230	processed_pseudogene		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83130840	94
ENSMUSG00000116316	lncRNA	Gm48462	ENSMUST00000229830	lncRNA		CHR_WSB_EIJ_MMCHR11_CTG3	1	83088268	358
ENSMUSG00000116327	protein_coding	Slfn14	ENSMUST00000230975	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	-1	83245134	3706
ENSMUSG00000116328	pseudogene	LT629154.4	ENSMUST00000229327	pseudogene		CHR_WSB_EIJ_MMCHR11_CTG3	1	83205141	867
ENSMUSG00000116379	pseudogene	LT629154.5	ENSMUST00000229389	pseudogene		CHR_WSB_EIJ_MMCHR11_CTG3	1	83206643	1011
ENSMUSG00000116431	protein_coding	Slfn3	ENSMUST00000230976	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	1	83150467	1816
ENSMUSG00000116431	protein_coding	Slfn3	ENSMUST00000230167	protein_coding		CHR_WSB_EIJ_MMCHR11_CTG3	1	83150470	1966
ENSMUSG00000116431	protein_coding	Slfn3	ENSMUST00000229693	processed_transcript		CHR_WSB_EIJ_MMCHR11_CTG3	1	83167735	2834
ENSMUSG00000116507	snRNA	Gm23444	ENSMUST00000229063	snRNA		CHR_WSB_EIJ_MMCHR11_CTG3	1	83229738	191
